607 513 147 29 22 chr17 3000040 3000179 -92272472 + GA-rich Low_complexity Low_complexity 4 143 0 1 607 1962 202 0 8 chr17 3000269 3000634 -92272017 - ETnERV2-int LTR ERVK -1924 5482 5121 2 607 1924 259 65 14 chr17 3000688 3001375 -92271276 - ETnERV2-int LTR ERVK -2893 4513 4083 2 607 2020 195 108 13 chr17 3001397 3001929 -92270722 - RMER16-int LTR ERVK -2567 2839 2316 3 607 340 207 0 0 chr17 3001933 3001991 -92270660 - RMER16-int LTR ERVK -3774 1632 1575 3 607 4175 110 3 7 chr17 3001999 3002610 -92270041 - L1Md_F2 LINE L1 0 6582 5974 4 607 468 150 0 0 chr17 3002617 3002697 -92269954 - ORR1A1 LTR MaLR 0 346 267 5 607 843 157 0 0 chr17 3002687 3002821 -92269830 + B1_Mus1 SINE Alu 8 141 -7 6 607 519 60 0 0 chr17 3002830 3002897 -92269754 + (GA)n Simple_repeat Simple_repeat 1 67 0 7 607 216 0 0 0 chr17 3002897 3002920 -92269731 + (GGAA)n Simple_repeat Simple_repeat 1 24 0 8 607 491 184 12 24 chr17 3003103 3003270 -92269381 + GA-rich Low_complexity Low_complexity 2 166 0 9 607 307 298 62 56 chr17 3003339 3003499 -92269152 + HAL1-3A_ME LINE L1 2284 2444 -414 1 607 631 153 3 55 chr17 3003499 3003851 -92268800 + GA-rich Low_complexity Low_complexity 1 333 0 1 607 983 213 32 45 chr17 3003852 3003924 -92268727 - RMER16-int LTR ERVK -4074 1332 1256 3 607 722 142 64 43 chr17 3003924 3004064 -92268587 + B1_Mus1 SINE Alu 1 143 -5 1 607 189 107 0 0 chr17 3004065 3004093 -92268558 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 607 983 213 32 45 chr17 3004093 3004264 -92268387 - RMER16-int LTR ERVK -4151 1255 1092 3 607 863 164 231 52 chr17 3004263 3004546 -92268105 - RMER16-int LTR ERVK -4593 813 493 3 607 258 269 11 0 chr17 3004547 3004640 -92268011 + Lx2B LINE L1 6898 6991 -9 1 607 204 224 0 20 chr17 3004659 3004709 -92267942 + GA-rich Low_complexity Low_complexity 1 49 0 1 607 266 253 0 39 chr17 3004970 3005048 -92267603 + GA-rich Low_complexity Low_complexity 2 76 0 1 607 1191 249 92 9 chr17 3005112 3005461 -92267190 - RLTR30 LTR ERV1 -1 378 1 1 607 202 220 0 0 chr17 3005860 3005910 -92266741 + A-rich Low_complexity Low_complexity 1 50 0 1 607 229 306 11 34 chr17 3007218 3007394 -92265257 + (CTGTG)n Simple_repeat Simple_repeat 2 173 0 1 607 244 305 0 43 chr17 3008630 3008815 -92263836 + (CTGTG)n Simple_repeat Simple_repeat 2 178 0 2 607 201 304 0 46 chr17 3008943 3009095 -92263556 + (CTGTG)n Simple_repeat Simple_repeat 4 148 0 2 607 203 308 0 44 chr17 3010008 3010188 -92262463 + (TACTG)n Simple_repeat Simple_repeat 5 176 0 2 607 321 289 0 39 chr17 3011369 3011524 -92261127 + (CTGTG)n Simple_repeat Simple_repeat 2 150 0 2 607 289 296 0 34 chr17 3012264 3012439 -92260212 + (CTGTG)n Simple_repeat Simple_repeat 2 170 0 2 607 267 299 0 43 chr17 3012860 3013045 -92259606 + (CTGTG)n Simple_repeat Simple_repeat 2 178 0 2 607 225 291 0 46 chr17 3013365 3013538 -92259113 + (TACTG)n Simple_repeat Simple_repeat 5 169 0 2 607 3134 42 0 0 chr17 3013994 3014351 -92258300 + IAPEY2_LTR LTR ERVK 1 357 0 2 608 207 293 0 41 chr17 3016531 3016652 -92255999 + (CTGTG)n Simple_repeat Simple_repeat 2 117 0 2 608 219 319 0 43 chr17 3016698 3016862 -92255789 + (CTGTG)n Simple_repeat Simple_repeat 2 158 0 2 608 215 276 6 44 chr17 3017217 3017376 -92255275 + (TACTG)n Simple_repeat Simple_repeat 2 154 0 2 608 208 259 8 43 chr17 3017761 3017878 -92254773 + (TACTG)n Simple_repeat Simple_repeat 2 114 0 3 608 231 316 0 43 chr17 3017972 3018157 -92254494 + (CTGTG)n Simple_repeat Simple_repeat 2 178 0 3 608 243 284 0 41 chr17 3020163 3020284 -92252367 + (CTGTG)n Simple_repeat Simple_repeat 2 117 0 3 608 219 282 0 41 chr17 3020497 3020619 -92252032 + (TACTG)n Simple_repeat Simple_repeat 5 121 0 3 608 237 309 0 44 chr17 3020789 3020972 -92251679 + (CTGTG)n Simple_repeat Simple_repeat 4 178 0 3 608 251 267 0 40 chr17 3020891 3021016 -92251635 + (TACTG)n Simple_repeat Simple_repeat 5 124 0 3 608 233 274 0 42 chr17 3021953 3022071 -92250580 + (TACTG)n Simple_repeat Simple_repeat 2 114 0 3 608 203 278 17 42 chr17 3025188 3025308 -92247343 + (CTGTG)n Simple_repeat Simple_repeat 2 118 0 3 608 201 307 0 45 chr17 3029111 3029268 -92243383 + (TACTG)n Simple_repeat Simple_repeat 5 154 0 3 608 304 275 0 48 chr17 3030713 3030900 -92241751 + (TACTG)n Simple_repeat Simple_repeat 2 179 0 3 608 205 287 0 42 chr17 3032160 3032280 -92240371 + (TACTG)n Simple_repeat Simple_repeat 5 119 0 4 608 227 290 0 43 chr17 3033158 3033320 -92239331 + (TACTG)n Simple_repeat Simple_repeat 5 159 0 4 608 214 279 13 45 chr17 3034985 3035139 -92237512 + (CAGTA)n Simple_repeat Simple_repeat 5 153 0 4 608 215 308 0 45 chr17 3035901 3036078 -92236573 + (CACAG)n Simple_repeat Simple_repeat 2 170 0 4 608 215 325 0 40 chr17 3037694 3037870 -92234781 + (CACAG)n Simple_repeat Simple_repeat 2 170 0 4 608 286 311 0 43 chr17 3038066 3038316 -92234335 + (CAGTG)n Simple_repeat Simple_repeat 1 239 0 4 608 201 260 0 38 chr17 3038526 3038606 -92234045 + (CACAG)n Simple_repeat Simple_repeat 2 78 0 4 608 22 35 0 0 chr17 3038968 3038997 -92233654 + AT_rich Low_complexity Low_complexity 1 29 0 4 608 235 226 45 45 chr17 3039007 3039095 -92233556 - L1MB8 LINE L1 -247 5931 5844 4 608 210 37 0 0 chr17 3039470 3039497 -92233154 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 608 946 147 10 55 chr17 3039518 3039720 -92232931 - Lx LINE L1 0 6654 6462 5 608 34 24 0 0 chr17 3039951 3039992 -92232659 + AT_rich Low_complexity Low_complexity 1 41 0 5 608 3758 112 3 25 chr17 3039997 3040585 -92232066 - Lx LINE L1 -2 6652 6078 5 608 3638 56 20 0 chr17 3040630 3041108 -92231543 - L1_Mus1 LINE L1 0 6567 6106 5 608 3433 30 5 0 chr17 3041108 3041509 -92231142 + L1_Mus1 LINE L1 5715 6117 -450 5 608 770 309 20 7 chr17 3043543 3043843 -92228808 - RLTR42-int LTR ERVK -328 5194 4891 5 608 240 59 0 0 chr17 3043849 3043883 -92228768 + (T)n Simple_repeat Simple_repeat 1 34 0 5 608 2166 257 70 42 chr17 3044800 3045658 -92226993 - RLTR42-int LTR ERVK -636 4886 4005 5 608 251 246 14 0 chr17 3045734 3045803 -92226848 - RLTR42-int LTR ERVK -2573 2949 2880 5 608 28 0 0 0 chr17 3046072 3046100 -92226551 + AT_rich Low_complexity Low_complexity 1 28 0 5 608 498 288 126 59 chr17 3047793 3048285 -92224366 - RMER5 LTR ERV1 -1 533 10 5 608 5904 142 11 15 chr17 3048486 3049443 -92223208 - RMER17B LTR ERVK -4 954 1 5 608 345 100 0 0 chr17 3049454 3049504 -92223147 + (TA)n Simple_repeat Simple_repeat 1 50 0 5 608 267 324 0 40 chr17 3049562 3049636 -92223015 - MIR SINE MIR -157 105 35 6 608 2847 28 3 0 chr17 3050031 3050356 -92222295 - IAPLTR3 LTR ERVK 0 326 1 6 608 637 413 30 18 chr17 3050735 3051240 -92221411 + MTE-int LTR MaLR 831 1341 -239 6 608 1409 79 104 23 chr17 3051808 3052029 -92220622 + L1Md_F2 LINE L1 6336 6574 -8 6 608 35 41 0 0 chr17 3052062 3052111 -92220540 + AT_rich Low_complexity Low_complexity 1 49 0 6 608 4251 46 18 8 chr17 3053517 3054024 -92218627 - LTRIS3 LTR ERV1 0 512 1 6 608 23 0 0 0 chr17 3054837 3054860 -92217791 + AT_rich Low_complexity Low_complexity 1 23 0 6 608 2599 67 91 24 chr17 3054906 3055289 -92217362 + RLTR9E LTR ERVK 1 409 0 6 608 189 74 0 0 chr17 3055464 3055491 -92217160 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 6 608 977 151 6 6 chr17 3055491 3055651 -92217000 - B2_Mm2 SINE B2 -34 161 2 6 608 2249 203 51 3 chr17 3055991 3056589 -92216062 + L1VL4 LINE L1 876 1501 -4385 7 608 410 53 18 0 chr17 3057591 3057648 -92215003 + (TTTC)n Simple_repeat Simple_repeat 2 59 0 7 608 2906 29 6 23 chr17 3058018 3058370 -92214281 + ORR1A1 LTR MaLR 1 346 0 7 608 5335 91 20 17 chr17 3062332 3063198 -92209453 - RLTR13A3 LTR ERVK 0 978 111 7 608 39423 69 11 22 chr17 3063215 3067012 -92205639 - ETnERV3-int LTR ERVK -7 5801 2039 7 608 1702 38 26 121 chr17 3067012 3067285 -92205366 - L1Md_F3 LINE L1 -2 6582 6336 7 608 39423 64 10 18 chr17 3067285 3069151 -92203500 - ETnERV3-int LTR ERVK -3770 2038 3 7 608 5427 87 20 16 chr17 3069153 3070018 -92202633 - RLTR13A3 LTR ERVK 0 978 111 7 608 1214 61 0 0 chr17 3070370 3070517 -92202134 + B1_Mus2 SINE Alu 1 147 0 7 608 5145 91 75 99 chr17 3078064 3078979 -92193672 - RLTR13B1 LTR ERVK 0 893 1 7 608 189 0 0 0 chr17 3082961 3082982 -92189669 + (A)n Simple_repeat Simple_repeat 1 21 0 7 608 710 76 244 0 chr17 3082983 3083102 -92189549 + B1_Mus1 SINE Alu 1 148 0 7 608 1133 81 0 0 chr17 3083219 3083367 -92189284 + B1_Mus1 SINE Alu 1 148 0 8 608 195 69 0 0 chr17 3083369 3083398 -92189253 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 608 252 59 0 0 chr17 3083509 3083543 -92189108 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 8 608 27 29 0 0 chr17 3083555 3083589 -92189062 + AT_rich Low_complexity Low_complexity 1 34 0 8 608 22 0 0 0 chr17 3083606 3083628 -92189023 + AT_rich Low_complexity Low_complexity 1 22 0 8 608 288 77 0 0 chr17 3083745 3083784 -92188867 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 8 608 30 27 0 0 chr17 3083794 3083831 -92188820 + AT_rich Low_complexity Low_complexity 1 37 0 8 608 22 0 0 0 chr17 3084954 3084976 -92187675 + AT_rich Low_complexity Low_complexity 1 22 0 8 608 521 111 9 57 chr17 3084997 3085102 -92187549 - B1_Mus1 SINE Alu -47 101 2 8 608 210 91 0 0 chr17 3085164 3085197 -92187454 + (ATG)n Simple_repeat Simple_repeat 3 35 0 8 608 21 0 0 0 chr17 3085751 3085772 -92186879 + AT_rich Low_complexity Low_complexity 1 21 0 9 608 319 211 26 0 chr17 3085860 3085936 -92186715 + ID4_ SINE ID 3 80 -3 9 608 308 164 0 0 chr17 3085996 3086051 -92186600 + B1F2 SINE Alu 1 55 -94 9 608 234 0 0 0 chr17 3086736 3086762 -92185889 + (TG)n Simple_repeat Simple_repeat 2 27 0 9 608 271 268 0 0 chr17 3086962 3087018 -92185633 + RSINE1 SINE B4 81 136 -29 9 608 24 0 0 0 chr17 3087026 3087050 -92185601 + AT_rich Low_complexity Low_complexity 1 24 0 9 608 1204 34 0 7 chr17 3087555 3087701 -92184950 + B1_Mm SINE Alu 1 145 -2 9 608 180 0 0 0 chr17 3087706 3087726 -92184925 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 9 608 547 220 9 9 chr17 3087976 3088086 -92184565 - B1_Mur1 SINE Alu -18 131 22 9 608 512 233 66 8 chr17 3088389 3088510 -92184141 + RSINE1 SINE B4 5 132 -33 9 608 414 0 0 0 chr17 3088695 3088741 -92183910 + (TC)n Simple_repeat Simple_repeat 1 46 0 1 608 324 310 35 26 chr17 3088752 3088868 -92183783 - PB1D10 SINE Alu 0 117 1 1 608 384 209 26 87 chr17 3089012 3089025 -92183626 + MT2B LTR ERVL 151 156 -445 1 608 687 162 0 0 chr17 3089025 3089136 -92183515 + B1_Mus1 SINE Alu 3 113 -35 1 608 297 0 0 0 chr17 3089169 3089202 -92183449 + (T)n Simple_repeat Simple_repeat 1 33 0 1 608 1232 48 0 0 chr17 3089202 3089349 -92183302 - B1_Mus2 SINE Alu 0 147 1 1 608 1575 48 21 0 chr17 3089358 3089547 -92183104 - B2_Mm1a SINE B2 0 193 1 1 608 1021 259 64 58 chr17 3089559 3089936 -92182715 - MTEb LTR MaLR 0 379 1 1 608 752 281 58 96 chr17 3091058 3091261 -92181390 + B4 SINE B4 1 200 -92 1 608 1109 83 0 14 chr17 3091261 3091398 -92181253 + B1_Mus1 SINE Alu 2 138 -10 1 608 198 0 0 0 chr17 3091398 3091420 -92181231 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 608 752 281 58 96 chr17 3091429 3091516 -92181135 + B4 SINE B4 201 280 -12 1 608 437 343 8 0 chr17 3091792 3091926 -92180725 + B4 SINE B4 2 136 -156 1 608 582 181 115 23 chr17 3091927 3092057 -92180594 + B1_Mm SINE Alu 5 146 -1 1 608 971 286 43 7 chr17 3092092 3092374 -92180277 + B4 SINE B4 1 292 0 1 608 463 55 27 27 chr17 3092448 3092523 -92180128 + (GGAA)n Simple_repeat Simple_repeat 3 77 0 1 608 444 244 16 47 chr17 3093831 3093960 -92178691 + PB1 SINE Alu 1 125 -2 1 608 943 94 56 28 chr17 3094885 3095027 -92177624 + B1_Mus1 SINE Alu 2 147 -1 1 608 27 0 0 0 chr17 3095027 3095054 -92177597 + AT_rich Low_complexity Low_complexity 1 27 0 1 608 227 122 0 20 chr17 3095059 3095109 -92177542 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 1 608 240 239 30 0 chr17 3096444 3096511 -92176140 + PB1D10 SINE Alu 42 110 -7 1 608 515 220 42 0 chr17 3096837 3096955 -92175696 - B1F SINE Alu -3 146 24 1 608 2037 43 15 12 chr17 3098582 3098852 -92173799 - L1Md_F3 LINE L1 0 6584 6325 1 608 211 194 40 27 chr17 3098852 3098915 -92173736 + T-rich Low_complexity Low_complexity 5 68 0 1 608 26 74 0 0 chr17 3099024 3099078 -92173573 + AT_rich Low_complexity Low_complexity 1 54 0 1 608 397 204 43 34 chr17 3099538 3099655 -92172996 - Lx5 LINE L1 0 7050 6933 1 608 582 228 55 0 chr17 3099655 3099782 -92172869 - B1_Mur1 SINE Alu -3 146 13 1 608 192 77 0 0 chr17 3100258 3100284 -92172367 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 1 608 468 0 0 0 chr17 3100529 3100581 -92172070 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 1 608 1536 43 16 0 chr17 3100581 3100765 -92171886 - B2_Mm2 SINE B2 -8 187 1 1 608 452 269 0 0 chr17 3100854 3100958 -92171693 - B3 SINE B2 -104 112 9 1 608 927 141 0 24 chr17 3101763 3101930 -92170721 - RMER6A LTR ERVK 0 756 594 1 608 2319 50 10 16 chr17 3101930 3102235 -92170416 - L1_Mus3 LINE L1 -7 6631 6329 1 608 229 114 0 0 chr17 3102942 3102977 -92169674 - L1MB4 LINE L1 -6302 305 271 1 608 3421 130 50 22 chr17 3103186 3103784 -92168867 - L1_Mus3 LINE L1 -4 6634 6020 1 608 609 256 28 22 chr17 3104680 3104860 -92167791 - B3A SINE B2 -17 181 1 1 608 317 320 169 17 chr17 3105067 3105369 -92167282 + Lx8 LINE L1 6804 7151 -322 1 608 369 0 0 0 chr17 3105549 3105590 -92167061 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 608 1207 62 0 0 chr17 3106034 3106180 -92166471 + B1_Mus2 SINE Alu 1 146 -1 1 608 231 114 0 0 chr17 3106182 3106226 -92166425 + (A)n Simple_repeat Simple_repeat 1 44 0 1 608 1714 26 0 0 chr17 3106680 3106872 -92165779 + B2_Mm1a SINE B2 1 192 -1 1 608 997 268 134 53 chr17 3106902 3107410 -92165241 + Lx8 LINE L1 6923 7471 -2 1 608 22 0 0 0 chr17 3107412 3107434 -92165217 + AT_rich Low_complexity Low_complexity 1 22 0 1 608 460 125 0 0 chr17 3107509 3107581 -92165070 + B1_Mus2 SINE Alu 64 135 -12 1 608 477 0 0 0 chr17 3107581 3107634 -92165017 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 608 9602 187 85 84 chr17 3107642 3108849 -92163802 + Lx5 LINE L1 3118 4229 -1651 1 608 1747 21 0 0 chr17 3108849 3109042 -92163609 - B2_Mm1a SINE B2 0 193 1 1 608 9602 184 83 87 chr17 3109042 3109773 -92162878 + Lx5 LINE L1 4230 4960 -920 1 608 1274 115 0 6 chr17 3109773 3109956 -92162695 + B2_Mm2 SINE B2 1 182 -13 1 608 9602 232 123 53 chr17 3109956 3111289 -92161362 + Lx5 LINE L1 4961 6716 -744 1 608 1236 184 14 70 chr17 3111298 3111654 -92160997 + RLTR31_Mur LTR ERVK 1 336 -217 1 608 253 318 68 53 chr17 3111647 3111780 -92160871 + RLTR31_Mm LTR ERVK 411 545 -16 1 608 6296 55 3 12 chr17 3111780 3112547 -92160104 - L1Md_F2 LINE L1 0 6582 5823 1 608 873 226 62 8 chr17 3112613 3112918 -92159733 + Lx5 LINE L1 6945 7132 -328 1 608 269 292 0 11 chr17 3112925 3113015 -92159636 + Lx5 LINE L1 7346 7434 -26 1 608 21 0 0 0 chr17 3113058 3113079 -92159572 + AT_rich Low_complexity Low_complexity 1 21 0 1 608 25 65 0 0 chr17 3115166 3115212 -92157439 + GC_rich Low_complexity Low_complexity 1 46 0 1 608 183 100 0 0 chr17 3115439 3115469 -92157182 + (CCCGG)n Simple_repeat Simple_repeat 1 30 0 1 608 24 96 0 0 chr17 3115509 3115582 -92157069 + GC_rich Low_complexity Low_complexity 1 73 0 1 608 1226 74 0 0 chr17 3116715 3116863 -92155788 - B1_Mus1 SINE Alu 0 148 1 1 608 460 234 39 105 chr17 3116988 3117141 -92155510 + B1_Mur2 SINE Alu 5 147 -2 1 608 3340 44 8 3 chr17 3117196 3117586 -92155065 + MTA_Mm LTR MaLR 1 392 -4 1 608 1127 83 14 7 chr17 3117586 3117732 -92154919 + B1_Mm SINE Alu 1 147 0 1 608 319 302 20 61 chr17 3118203 3118351 -92154300 - B1F SINE Alu -5 144 3 1 608 274 172 14 72 chr17 3118650 3118664 -92153987 - B4A SINE B4 -142 150 86 1 608 317 132 0 36 chr17 3118664 3118719 -92153932 - B1F1 SINE Alu -96 53 1 1 608 489 345 14 7 chr17 3118788 3118931 -92153720 + B1F1 SINE Alu 1 144 -5 1 608 21 0 0 0 chr17 3119104 3119125 -92153526 + AT_rich Low_complexity Low_complexity 1 21 0 1 608 312 315 28 60 chr17 3120184 3120302 -92152349 - B1F2 SINE Alu -37 112 2 1 608 336 272 125 36 chr17 3120855 3121023 -92151628 - MER20 DNA MER1_type -34 185 3 1 608 784 311 97 13 chr17 3123999 3124309 -92148342 - MER2 DNA MER2_type -2 343 8 1 608 1382 110 16 10 chr17 3125136 3125329 -92147322 - B2_Mm2 SINE B2 0 195 2 1 608 971 243 34 10 chr17 3125432 3125636 -92147015 - B3 SINE B2 -7 209 1 1 608 207 0 0 0 chr17 3125753 3125776 -92146875 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 608 406 274 236 20 chr17 3125994 3126396 -92146255 - L1MC4 LINE L1 -753 7289 6801 1 608 1344 157 28 0 chr17 3126535 3126752 -92145899 - URR1A DNA MER1_type 0 226 4 1 608 453 155 29 76 chr17 3126888 3126993 -92145658 - PB1D7 SINE Alu -20 100 1 1 608 316 230 0 63 chr17 3126926 3127005 -92145646 - B4 SINE B4 -142 150 77 1 608 225 0 0 0 chr17 3127041 3127066 -92145585 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1 608 496 246 36 18 chr17 3127073 3127185 -92145466 - B1F2 SINE Alu -32 117 4 1 608 1260 159 111 32 chr17 3127907 3128221 -92144430 - ORR1B1 LTR MaLR -2 392 1 1 608 368 224 0 0 chr17 3128777 3128853 -92143798 - B3 SINE B2 -1 215 140 1 608 305 236 91 36 chr17 3128919 3129029 -92143622 - PB1D10 SINE Alu -1 116 1 1 608 627 217 84 15 chr17 3129762 3129893 -92142758 + B1_Mur1 SINE Alu 8 147 -2 1 608 252 0 0 0 chr17 3130082 3130110 -92142541 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1 608 337 179 33 67 chr17 3130569 3130659 -92141992 - RSINE1 SINE B4 -205 87 1 1 608 396 136 0 0 chr17 3131246 3131305 -92141346 - B1_Mur3 SINE Alu -21 128 70 1 608 1226 69 0 0 chr17 3131407 3131552 -92141099 - B1_Mus1 SINE Alu -2 146 2 1 608 530 240 178 11 chr17 3131632 3131817 -92140834 + B3 SINE B2 1 216 0 1 608 1160 66 75 32 chr17 3132195 3132382 -92140269 - B2_Mm2 SINE B2 0 195 1 1 608 297 0 0 0 chr17 3132412 3132445 -92140206 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 608 273 294 0 0 chr17 3132549 3132617 -92140034 - RMER15 LTR ERVL -105 470 403 1 608 294 143 0 0 chr17 3132764 3132827 -92139824 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 608 180 0 0 0 chr17 3132886 3132906 -92139745 + (TTCCC)n Simple_repeat Simple_repeat 4 23 0 1 608 21 0 0 0 chr17 3132906 3132927 -92139724 + AT_rich Low_complexity Low_complexity 1 21 0 1 608 735 132 26 38 chr17 3132935 3133065 -92139586 - B1_Mus2 SINE Alu -7 140 15 1 608 250 143 157 0 chr17 3133357 3133427 -92139224 - L1MEf LINE L1 -6069 131 51 1 608 1123 97 0 7 chr17 3133740 3133886 -92138765 - B1_Mus2 SINE Alu -1 146 2 1 608 227 304 152 0 chr17 3134482 3134561 -92138090 + RSINE1 SINE B4 75 165 0 1 608 1219 88 0 0 chr17 3134815 3134963 -92137688 - B1_Mus1 SINE Alu 0 148 1 1 608 426 39 0 0 chr17 3134966 3135018 -92137633 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 608 1133 64 0 43 chr17 3135019 3135182 -92137469 - B2_Mm2 SINE B2 -11 184 29 1 608 369 237 106 41 chr17 3135528 3135651 -92137000 - RMER15 LTR ERVL -154 421 291 1 608 837 170 0 33 chr17 3135740 3135892 -92136759 - B1_Mus2 SINE Alu 0 147 1 1 608 297 145 60 15 chr17 3135901 3135981 -92136670 - L1MB7 LINE L1 -1 6183 6101 1 608 239 303 65 75 chr17 3136075 3136275 -92136376 - Lx8 LINE L1 -436 7037 6840 2 608 453 294 124 11 chr17 3136297 3136581 -92136070 - RMER15-int LTR ERVL -306 4693 4378 1 608 225 0 0 0 chr17 3136632 3136657 -92135994 + (A)n Simple_repeat Simple_repeat 1 25 0 2 608 332 246 197 45 chr17 3136703 3136835 -92135816 - RMER15-int LTR ERVL -692 4307 4156 1 608 2919 139 92 15 chr17 3137215 3137853 -92134798 + RMER6A LTR ERVK 19 756 0 2 608 234 222 56 0 chr17 3138111 3138165 -92134486 + LTR59 LTR ERV1 382 438 -159 2 608 355 319 71 12 chr17 3138528 3138696 -92133955 - RMER15-int LTR ERVL -3869 1130 953 1 608 274 266 104 52 chr17 3140272 3140407 -92132244 - MLT1A LTR MaLR -217 157 16 2 608 243 0 0 0 chr17 3140465 3140492 -92132159 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2 608 1099 74 7 0 chr17 3140492 3140627 -92132024 - B1_Mus1 SINE Alu -10 138 3 2 608 704 86 9 54 chr17 3141957 3142068 -92130583 - B1_Mur4 SINE Alu -18 132 27 2 608 222 281 58 68 chr17 3141979 3142082 -92130569 - B4 SINE B4 -94 198 97 2 608 440 79 161 5 chr17 3142320 3142430 -92130221 - B2_Mm2 SINE B2 -4 191 47 2 608 1162 73 24 24 chr17 3142459 3142627 -92130024 - B2_Mm2 SINE B2 -14 181 14 2 608 434 320 16 8 chr17 3143366 3143492 -92129159 - B1_Mur1 SINE Alu -22 127 1 2 608 313 234 122 23 chr17 3143492 3143623 -92129028 - L1MB7 LINE L1 -3 6175 6032 2 608 350 194 0 43 chr17 3143653 3143723 -92128928 - ID4 SINE ID -8 75 9 2 608 186 43 0 0 chr17 3143727 3143750 -92128901 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 2 608 832 54 9 0 chr17 3143751 3143862 -92128789 - B1_Mus2 SINE Alu 0 147 36 2 608 343 118 111 62 chr17 3143793 3143874 -92128777 - RLTR25B LTR ERVK -519 509 425 2 608 273 323 140 0 chr17 3143882 3143975 -92128676 + PB1 SINE Alu 12 117 -10 2 608 342 285 74 91 chr17 3143989 3144122 -92128529 - L1MB7 LINE L1 -319 5865 5720 2 608 222 37 0 0 chr17 3144122 3144149 -92128502 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2 608 1120 88 0 0 chr17 3144149 3144286 -92128365 - B1_Mus2 SINE Alu -9 138 2 2 608 342 285 74 91 chr17 3144286 3144324 -92128327 - L1MB7 LINE L1 -465 5719 5694 2 608 861 169 0 75 chr17 3144324 3144484 -92128167 - B1_Mur1 SINE Alu 0 149 2 2 608 342 285 74 91 chr17 3144484 3144607 -92128044 - L1MB7 LINE L1 -491 5693 5576 2 608 493 243 55 62 chr17 3144657 3144802 -92127849 - RSINE1 SINE B4 -19 146 3 2 608 450 0 0 0 chr17 3145212 3145262 -92127389 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 608 375 254 86 60 chr17 3145402 3145553 -92127098 + MTE2a LTR MaLR 48 202 -177 2 608 280 324 37 19 chr17 3145620 3145727 -92126924 - RSINE1 SINE B4 -50 115 7 2 9 547 222 207 7 chr17 3145727 3145872 -92126779 + MTE2a LTR MaLR 201 374 -5 2 609 308 186 0 0 chr17 3145884 3145943 -92126708 + B3 SINE B2 152 210 -6 2 609 561 258 42 66 chr17 3146645 3146811 -92125840 - RSINE1 SINE B4 0 165 4 2 609 329 342 36 0 chr17 3148179 3148290 -92124361 - PB1D10 SINE Alu 0 117 3 2 609 563 237 126 55 chr17 3148701 3148884 -92123767 - B3A SINE B2 -2 196 1 2 609 2321 141 29 32 chr17 3149533 3149943 -92122708 - MTC LTR MaLR -2 419 11 2 609 526 230 99 49 chr17 3150175 3150317 -92122334 + B1_Mur2 SINE Alu 1 149 0 2 609 247 211 234 21 chr17 3150339 3150484 -92122167 + RMER17C LTR ERVK 100 275 -135 2 609 39 22 0 0 chr17 3150486 3150532 -92122119 + AT_rich Low_complexity Low_complexity 1 46 0 2 609 707 202 148 58 chr17 3150546 3150735 -92121916 - B3 SINE B2 -10 206 1 2 609 1491 83 5 10 chr17 3150766 3150960 -92121691 - B2_Mm1t SINE B2 0 193 1 2 609 1107 106 34 29 chr17 3151087 3151262 -92121389 - L1Md_F2 LINE L1 0 6582 6407 2 609 432 19 0 0 chr17 3151262 3151316 -92121335 + L1_Mm LINE L1 3956 4009 -1874 2 609 309 301 124 9 chr17 3151941 3152166 -92120485 - L1MD2 LINE L1 -457 5902 5652 2 609 511 250 147 0 chr17 3152393 3152529 -92120122 - RSINE1 SINE B4 -6 159 4 2 609 368 311 34 67 chr17 3153203 3153382 -92119269 - B3A SINE B2 -2 196 24 2 609 201 94 0 0 chr17 3153521 3153553 -92119098 + (C)n Simple_repeat Simple_repeat 1 32 0 2 609 931 81 0 0 chr17 3154523 3154646 -92118005 - B2_Mm2 SINE B2 -71 124 2 2 609 313 257 54 62 chr17 3154762 3154874 -92117777 + PB1D10 SINE Alu 6 116 -1 2 609 2847 108 21 61 chr17 3156879 3157351 -92115300 - RLTR11B LTR ERVK 0 453 1 2 609 219 69 0 0 chr17 3157967 3157996 -92114655 + (A)n Simple_repeat Simple_repeat 1 29 0 2 609 370 206 126 36 chr17 3158196 3158307 -92114344 + B2_Mm2 SINE B2 1 121 -74 2 609 711 88 0 29 chr17 3158366 3158471 -92114180 + BC1_Mm scRNA scRNA 2 103 -49 2 609 21 36 0 0 chr17 3158876 3158904 -92113747 + AT_rich Low_complexity Low_complexity 1 28 0 2 609 420 288 40 80 chr17 3159860 3160060 -92112591 + B3A SINE B2 2 193 -5 2 609 264 213 0 0 chr17 3160849 3160910 -92111741 + CT-rich Low_complexity Low_complexity 1 61 0 2 609 27 29 0 0 chr17 3161110 3161144 -92111507 + AT_rich Low_complexity Low_complexity 1 34 0 2 609 229 316 51 0 chr17 3162451 3162549 -92110102 + B4 SINE B4 2 104 -188 2 609 346 234 0 0 chr17 3163440 3163504 -92109147 - ID4_ SINE ID -18 65 2 2 609 249 149 0 75 chr17 3164811 3164891 -92107760 + (TATAA)n Simple_repeat Simple_repeat 3 76 0 2 609 246 276 157 14 chr17 3165096 3165192 -92107459 - L1MA5 LINE L1 -35 6265 6164 2 609 306 0 0 0 chr17 3165192 3165226 -92107425 + (TTG)n Simple_repeat Simple_repeat 3 36 0 2 609 246 276 157 14 chr17 3165226 3165276 -92107375 - L1MA5 LINE L1 -137 6163 6100 2 609 444 228 163 0 chr17 3165429 3165552 -92107099 - B3A SINE B2 -55 143 1 2 609 458 222 179 26 chr17 3165890 3166186 -92106465 - MTD LTR MaLR -21 400 17 2 609 1289 265 115 37 chr17 3166211 3166751 -92105900 - MTD-int LTR MaLR -4 1254 673 2 609 964 217 43 33 chr17 3166782 3166992 -92105659 - B3 SINE B2 -4 212 1 2 609 222 37 0 0 chr17 3166992 3167019 -92105632 + (T)n Simple_repeat Simple_repeat 1 27 0 2 609 280 292 209 20 chr17 3167019 3167215 -92105436 - MTD-int LTR MaLR -702 556 324 2 609 913 259 30 146 chr17 3167257 3167660 -92104991 - ORR1D2 LTR MaLR -14 356 1 2 609 1266 106 33 11 chr17 3167716 3167898 -92104753 + B2_Mm2 SINE B2 1 186 -9 2 609 333 0 0 0 chr17 3168432 3168469 -92104182 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 609 561 226 43 17 chr17 3168746 3168863 -92103788 + B1_Mus1 SINE Alu 23 142 -6 2 609 229 305 110 0 chr17 3168947 3169065 -92103586 - Tigger7 DNA MER2_type -31 2460 2330 2 609 196 318 273 11 chr17 3170330 3170597 -92102054 - L3 LINE CR1 -286 4203 3867 2 609 405 0 0 0 chr17 3170973 3171018 -92101633 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 609 228 231 15 0 chr17 3171147 3171212 -92101439 + (CAG)n Simple_repeat Simple_repeat 2 67 0 2 609 21 0 0 0 chr17 3171370 3171391 -92101260 + AT_rich Low_complexity Low_complexity 1 21 0 2 609 272 301 28 76 chr17 3171728 3171872 -92100779 - MER104 DNA Tc2 -43 138 2 2 609 2207 137 97 8 chr17 3172704 3173066 -92099585 - ORR1B1 LTR MaLR 0 394 1 2 609 434 267 72 40 chr17 3173087 3173212 -92099439 + B3A SINE B2 2 130 -68 2 609 669 226 28 42 chr17 3173260 3173403 -92099248 - B1_Mur2 SINE Alu -8 141 1 2 609 771 207 14 14 chr17 3173861 3174008 -92098643 + B1_Mur2 SINE Alu 1 147 -2 2 609 198 0 0 0 chr17 3174014 3174036 -92098615 + (GAAAA)n Simple_repeat Simple_repeat 2 23 0 2 609 1126 82 0 20 chr17 3174704 3174853 -92097798 - B1_Mus2 SINE Alu -1 146 1 2 609 302 312 134 0 chr17 3174875 3175032 -92097619 - Looper DNA PiggyBac -875 683 506 2 609 817 219 77 0 chr17 3175159 3175328 -92097323 + B3 SINE B2 1 182 -34 2 609 301 312 0 0 chr17 3175876 3175940 -92096711 - RSINE1 SINE B4 -94 71 8 2 609 1162 111 0 12 chr17 3176007 3176180 -92096471 + B2_Mm2 SINE B2 2 172 -23 2 609 180 111 0 0 chr17 3176184 3176211 -92096440 + (AGGGGG)n Simple_repeat Simple_repeat 2 28 0 2 609 936 147 0 40 chr17 3177269 3177418 -92095233 + B1_Mus2 SINE Alu 5 147 0 2 609 473 271 144 74 chr17 3178412 3178655 -92093996 + B4 SINE B4 29 288 -4 2 609 23 33 0 0 chr17 3178959 3178989 -92093662 + AT_rich Low_complexity Low_complexity 1 30 0 2 609 244 329 0 13 chr17 3179007 3179084 -92093567 - ID4_ SINE ID -6 77 2 2 609 1500 175 153 6 chr17 3179886 3180225 -92092426 - MTC LTR MaLR -8 413 25 2 609 1855 187 215 45 chr17 3180213 3180601 -92092050 - MTC-int LTR MaLR -14 1244 789 2 609 432 0 0 0 chr17 3180601 3180649 -92092002 + (CTG)n Simple_repeat Simple_repeat 2 49 0 2 609 1855 232 159 73 chr17 3180649 3180941 -92091710 - MTC-int LTR MaLR -470 788 375 2 609 1626 42 10 16 chr17 3180941 3181134 -92091517 - B2_Mm1t SINE B2 -1 192 1 2 609 1358 274 105 99 chr17 3181134 3181150 -92091501 - MTC-int LTR MaLR -724 374 372 2 609 976 239 24 28 chr17 3181150 3181361 -92091290 - B3 SINE B2 -6 210 1 2 609 1358 274 105 99 chr17 3181361 3181497 -92091154 - MTC-int LTR MaLR -727 371 245 2 609 888 131 254 6 chr17 3181555 3181732 -92090919 - URR1A DNA MER1_type 0 226 6 2 609 721 219 6 32 chr17 3181736 3181892 -92090759 - MTC LTR MaLR -269 152 1 2 609 288 0 0 0 chr17 3181948 3181980 -92090671 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 609 766 289 15 26 chr17 3181981 3182176 -92090475 - B3 SINE B2 -23 193 1 2 609 360 305 15 0 chr17 3182191 3182322 -92090329 - L1MA6 LINE L1 -12 6288 6156 2 609 21 0 0 0 chr17 3182468 3182489 -92090162 + AT_rich Low_complexity Low_complexity 1 21 0 2 609 326 298 42 15 chr17 3182899 3183086 -92089565 - L1MA6 LINE L1 -301 5996 5804 2 609 591 280 35 14 chr17 3183886 3184031 -92088620 - RSINE1 SINE B4 -1 164 17 2 609 182 209 70 0 chr17 3184747 3184790 -92087861 - MER5A DNA MER1_type -1 188 143 2 609 2511 51 0 0 chr17 3186081 3186374 -92086277 - L1_Mus1 LINE L1 -1 6566 6274 2 609 312 27 0 0 chr17 3186410 3186447 -92086204 + (TGG)n Simple_repeat Simple_repeat 1 37 0 2 609 1200 65 0 0 chr17 3186447 3186586 -92086065 - B1_Mus1 SINE Alu -9 139 1 2 609 1041 148 166 21 chr17 3186969 3187162 -92085489 + URR1B DNA MER1_type 5 225 0 3 609 224 286 28 28 chr17 3188344 3188416 -92084235 + ID4 SINE ID 5 76 -7 3 609 573 169 11 43 chr17 3188697 3188744 -92083907 + polypyrimidine Low_complexity Low_complexity 135 180 0 3 609 1171 62 0 27 chr17 3188744 3188927 -92083724 + (TTC)n Simple_repeat Simple_repeat 3 180 0 3 609 1151 112 6 0 chr17 3188935 3189114 -92083537 + (TCC)n Simple_repeat Simple_repeat 1 180 0 3 609 573 169 11 43 chr17 3189114 3189243 -92083408 + CT-rich Low_complexity Low_complexity 1 126 0 3 609 243 61 0 0 chr17 3189238 3189271 -92083380 + (TC)n Simple_repeat Simple_repeat 2 34 0 3 609 297 301 121 26 chr17 3189427 3189543 -92083108 + B1_Mur1 SINE Alu 4 130 -19 3 609 282 271 150 2 chr17 3189782 3189886 -92082765 - PB1 SINE Alu -37 112 1 3 609 24 32 0 0 chr17 3190525 3190556 -92082095 + AT_rich Low_complexity Low_complexity 1 31 0 3 609 358 340 118 47 chr17 3190879 3191472 -92081179 - L2 LINE L2 -447 2972 2338 3 609 1352 27 0 0 chr17 3192178 3192325 -92080326 + B1_Mm SINE Alu 1 147 0 3 609 309 278 83 9 chr17 3192801 3192910 -92079741 + PB1 SINE Alu 6 122 -5 3 609 238 309 20 41 chr17 3193522 3193620 -92079031 - L1MC1 LINE L1 -42 6291 6196 3 609 360 0 0 0 chr17 3195362 3195402 -92077249 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 609 211 204 82 0 chr17 3196181 3196230 -92076421 + ID4_ SINE ID 2 54 -29 3 609 908 290 111 46 chr17 3199121 3199707 -92072944 + MER51-int LTR ERV1 2229 2852 -4964 3 609 7844 136 49 20 chr17 3201052 3202326 -92070325 - Lx4A LINE L1 -2 7056 5747 3 609 293 309 26 52 chr17 3203276 3203392 -92069259 - PB1D7 SINE Alu -7 113 1 3 609 257 233 93 27 chr17 3204591 3204666 -92067985 + PB1D10 SINE Alu 35 114 -3 3 609 26 0 0 0 chr17 3204793 3204819 -92067832 + AT_rich Low_complexity Low_complexity 1 26 0 3 609 186 337 60 0 chr17 3204820 3204903 -92067748 + MIR SINE MIR 44 131 -131 3 609 1307 21 7 0 chr17 3205716 3205860 -92066791 + B1_Mm SINE Alu 2 146 -1 3 609 532 147 284 0 chr17 3206875 3206984 -92065667 - B1_Mus1 SINE Alu -7 141 2 3 609 264 200 148 16 chr17 3207256 3207317 -92065334 + ID4 SINE ID 2 70 -13 3 609 1130 102 0 26 chr17 3208167 3208318 -92064333 + B1_Mus1 SINE Alu 2 148 0 3 609 241 288 65 94 chr17 3208681 3208714 -92063937 + MT2B LTR ERVL 124 152 -449 3 609 560 204 17 34 chr17 3208714 3208831 -92063820 + B1_Mur4 SINE Alu 3 117 -33 3 609 449 310 106 45 chr17 3211022 3211286 -92061365 - Lx8 LINE L1 0 7473 7194 3 609 568 267 0 36 chr17 3211815 3211955 -92060696 - RSINE1 SINE B4 -15 150 16 3 609 214 341 0 45 chr17 3211884 3211973 -92060678 - B3 SINE B2 -131 85 1 3 609 293 185 15 0 chr17 3211973 3212038 -92060613 + CT-rich Low_complexity Low_complexity 4 69 0 3 609 1247 62 7 0 chr17 3213500 3213646 -92059005 + B1_Mus1 SINE Alu 2 148 0 3 609 701 141 132 0 chr17 3213913 3214075 -92058576 + B3 SINE B2 2 192 -3 3 609 417 177 0 0 chr17 3214317 3214396 -92058255 + (TATG)n Simple_repeat Simple_repeat 2 80 0 3 609 910 144 24 30 chr17 3214771 3214936 -92057715 - URR1A DNA MER1_type -2 224 61 3 609 996 109 309 0 chr17 3216522 3216687 -92055964 + B3 SINE B2 1 216 0 3 609 186 118 0 0 chr17 3218293 3218327 -92054324 + (C)n Simple_repeat Simple_repeat 1 34 0 3 609 236 274 0 0 chr17 3218490 3218541 -92054110 + MER3 DNA MER1_type 40 90 -119 3 609 246 264 217 57 chr17 3218503 3218660 -92053991 - MER3 DNA MER1_type -5 204 23 3 609 356 203 39 39 chr17 3218844 3218921 -92053730 + ID4 SINE ID 2 78 -5 3 609 731 249 12 30 chr17 3219299 3219465 -92053186 + B3A SINE B2 26 188 -10 3 609 31 26 0 0 chr17 3220143 3220181 -92052470 + AT_rich Low_complexity Low_complexity 1 38 0 3 609 307 255 53 107 chr17 3220208 3220471 -92052180 + L1MB7 LINE L1 5868 6116 -68 3 609 758 227 286 15 chr17 3220649 3220940 -92051711 + Lx6 LINE L1 7108 7523 -173 3 609 390 340 32 25 chr17 3221350 3221507 -92051144 - RSINE1 SINE B4 -6 159 2 3 609 348 300 105 21 chr17 3222634 3222777 -92049874 + RSINE1 SINE B4 3 157 -8 3 609 418 223 61 76 chr17 3223141 3223272 -92049379 - B4A SINE B4 -161 131 3 3 609 276 312 8 59 chr17 3224439 3224558 -92048093 - MT2B LTR ERVL -295 306 194 3 609 319 202 152 33 chr17 3224491 3224583 -92048068 - B1_Mus2 SINE Alu -46 104 2 3 609 223 299 138 0 chr17 3224861 3224948 -92047703 - PB1 SINE Alu -28 99 1 3 609 618 122 0 0 chr17 3225439 3225546 -92047105 + (TC)n Simple_repeat Simple_repeat 2 108 0 3 609 405 0 0 0 chr17 3225546 3225591 -92047060 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 609 762 196 0 0 chr17 3226038 3226285 -92046366 + (TGGA)n Simple_repeat Simple_repeat 1 247 0 3 609 627 129 250 0 chr17 3226744 3226860 -92045791 + B1_Mus1 SINE Alu 3 147 -1 3 609 498 332 79 57 chr17 3227283 3227464 -92045187 - B4A SINE B4 -20 272 84 3 609 216 0 0 0 chr17 3227464 3227488 -92045163 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 3 609 498 332 79 57 chr17 3227488 3227571 -92045080 - B4A SINE B4 -209 83 2 3 609 3216 58 5 0 chr17 3228195 3228589 -92044062 + MTA_Mm LTR MaLR 1 396 0 3 609 997 213 66 0 chr17 3228901 3229112 -92043539 - URR1B DNA MER1_type 0 225 1 3 609 456 333 49 7 chr17 3231638 3231780 -92040871 - RSINE1 SINE B4 -6 159 12 3 609 23 33 0 0 chr17 3232336 3232366 -92040285 + AT_rich Low_complexity Low_complexity 1 30 0 3 609 199 266 139 74 chr17 3232728 3232850 -92039801 - L2c LINE L2 -5 3382 3253 3 609 1207 48 0 13 chr17 3233265 3233414 -92039237 + B1_Mm SINE Alu 1 147 0 3 609 182 301 80 27 chr17 3233974 3234049 -92038602 - L2c LINE L2 -10 3377 3299 3 609 722 251 36 0 chr17 3234569 3234764 -92037887 - B3 SINE B2 -10 206 5 3 609 186 118 0 0 chr17 3234910 3234944 -92037707 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 609 1169 194 161 31 chr17 3236045 3236065 -92036586 - ORR1B2 LTR MaLR -37 330 302 3 609 855 0 0 0 chr17 3236065 3236160 -92036491 + (GGAAA)n Simple_repeat Simple_repeat 2 96 0 3 609 1169 194 161 31 chr17 3236160 3236431 -92036220 - ORR1B2 LTR MaLR -66 301 2 3 609 353 105 52 21 chr17 3236773 3236870 -92035781 + (TCTA)n Simple_repeat Simple_repeat 1 100 0 3 609 1194 195 5 0 chr17 3236870 3237075 -92035576 - B3 SINE B2 -6 210 5 3 609 806 249 65 42 chr17 3237919 3238133 -92034518 - ID_B1 SINE B4 -5 219 1 3 609 1172 75 0 0 chr17 3238156 3238303 -92034348 - B1_Mus2 SINE Alu 0 147 1 3 609 208 147 0 0 chr17 3238332 3238366 -92034285 + (T)n Simple_repeat Simple_repeat 1 34 0 3 609 279 173 0 0 chr17 3238826 3238878 -92033773 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 609 207 100 0 0 chr17 3238903 3238933 -92033718 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 609 669 210 27 20 chr17 3238944 3239090 -92033561 - B1_Mm SINE Alu 0 147 1 3 609 230 244 0 0 chr17 3239196 3239241 -92033410 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 609 183 42 0 0 chr17 3239292 3239316 -92033335 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 3 609 867 261 41 18 chr17 3239318 3239537 -92033114 - B4A SINE B4 -68 224 1 3 609 1322 94 5 16 chr17 3239546 3239730 -92032921 - B2_Mm2 SINE B2 -9 186 5 3 609 234 0 0 0 chr17 3239821 3239847 -92032804 + (T)n Simple_repeat Simple_repeat 1 26 0 3 609 1785 161 80 0 chr17 3241227 3241538 -92031113 - RMER20A LTR ERVK -180 336 1 3 609 343 168 16 43 chr17 3241843 3241934 -92030717 - MTE2b LTR MaLR -95 284 192 3 609 233 308 26 78 chr17 3243471 3243587 -92029064 - B4 SINE B4 -180 112 3 3 609 427 268 0 9 chr17 3245734 3245847 -92026804 + PB1D10 SINE Alu 5 116 -1 3 609 1046 281 32 11 chr17 3245858 3246142 -92026509 + B4 SINE B4 2 291 -1 3 609 315 0 0 0 chr17 3250109 3250144 -92022507 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 609 623 318 13 36 chr17 3250303 3250528 -92022123 - B4 SINE B4 -2 290 71 3 609 257 401 57 13 chr17 3250812 3250971 -92021680 + Tigger12c DNA MER2_type 18 183 -551 3 609 449 165 10 0 chr17 3251478 3251575 -92021076 + GA-rich Low_complexity Low_complexity 1 98 0 3 609 307 229 29 0 chr17 3251901 3251971 -92020680 + ID4_ SINE ID 3 74 -9 3 609 651 88 0 0 chr17 3253137 3253228 -92019423 + (GGAA)n Simple_repeat Simple_repeat 3 93 0 3 609 8342 40 2 1 chr17 3255108 3256142 -92016509 - L1_Mus1 LINE L1 -1 6566 5532 3 609 354 273 25 41 chr17 3256379 3256515 -92016136 - PB1D7 SINE Alu -13 134 3 3 609 235 286 0 135 chr17 3256515 3256547 -92016104 - B4 SINE B4 -205 87 68 3 609 28 0 0 0 chr17 3257102 3257130 -92015521 + AT_rich Low_complexity Low_complexity 1 28 0 3 609 306 0 0 0 chr17 3258266 3258300 -92014351 + (A)n Simple_repeat Simple_repeat 1 34 0 3 609 22 0 0 0 chr17 3258376 3258398 -92014253 + AT_rich Low_complexity Low_complexity 1 22 0 3 609 812 278 39 53 chr17 3259625 3259910 -92012741 + B4 SINE B4 1 281 -11 3 609 1631 145 16 204 chr17 3259922 3260054 -92012597 - RLTR15 LTR ERVK 0 359 228 3 609 270 0 0 0 chr17 3260054 3260084 -92012567 + (GTTTG)n Simple_repeat Simple_repeat 3 32 0 4 609 1631 145 16 204 chr17 3260084 3260164 -92012487 - RLTR15 LTR ERVK -132 227 227 4 609 1090 105 0 0 chr17 3260164 3260307 -92012344 - B1_Mus1 SINE Alu -1 147 5 4 609 1631 145 16 204 chr17 3260307 3260535 -92012116 - RLTR15 LTR ERVK -132 227 1 3 609 264 313 46 122 chr17 3260542 3260673 -92011978 - PB1 SINE Alu -2 125 5 4 609 1570 47 5 0 chr17 3261524 3261716 -92010935 - B2_Mm1t SINE B2 0 193 1 4 609 917 64 0 23 chr17 3263424 3263552 -92009099 + B1_Mus2 SINE Alu 2 126 -21 4 609 1050 194 5 25 chr17 3263692 3263888 -92008763 + B3 SINE B2 25 216 0 4 609 348 205 86 37 chr17 3264579 3264660 -92007991 - RSINE1 SINE B4 -31 134 50 4 609 441 0 0 0 chr17 3265371 3265420 -92007231 + (TTA)n Simple_repeat Simple_repeat 2 50 0 4 609 438 251 107 77 chr17 3265791 3266209 -92006442 - RLTR15 LTR ERVK -18 341 1 4 609 411 149 0 0 chr17 3266583 3266657 -92005994 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 4 609 237 65 0 0 chr17 3266751 3266782 -92005869 + (TAA)n Simple_repeat Simple_repeat 3 33 0 4 609 263 247 39 14 chr17 3266974 3267070 -92005581 + MIRc SINE MIR 115 219 -49 4 609 180 0 0 0 chr17 3267205 3267225 -92005426 + (CAAAA)n Simple_repeat Simple_repeat 4 23 0 4 609 560 294 7 42 chr17 3267318 3267460 -92005191 - ID_B1 SINE B4 -8 216 80 4 609 394 285 55 18 chr17 3268343 3268495 -92004156 - MLT1D LTR MaLR -466 161 1 4 609 594 267 18 50 chr17 3268651 3268829 -92003822 + ID_B1 SINE B4 57 224 0 4 609 862 278 34 17 chr17 3269071 3269309 -92003342 + B4A SINE B4 43 284 -8 4 609 257 190 35 0 chr17 3269316 3269374 -92003277 + CT-rich Low_complexity Low_complexity 1 60 0 4 609 224 343 15 15 chr17 3269391 3269459 -92003192 + ID4_ SINE ID 14 81 -2 4 609 350 316 64 6 chr17 3269625 3269781 -92002870 - ORSL-2b DNA Tip100 -23 485 321 4 609 219 275 0 42 chr17 3269993 3270065 -92002586 + L2c LINE L2 3064 3132 -255 4 609 676 259 19 12 chr17 3271180 3271340 -92001311 + ID_B1 SINE B4 12 172 -52 4 609 999 173 22 27 chr17 3271355 3271539 -92001112 - URR1A DNA MER1_type -43 183 1 4 609 224 344 94 31 chr17 3273195 3273354 -91999297 - MIRb SINE MIR -45 223 55 4 609 242 341 0 32 chr17 3273361 3273400 -91999251 + ID_B1 SINE B4 121 211 -13 4 609 251 182 127 0 chr17 3273400 3273455 -91999196 + PB1D10 SINE Alu 43 104 -13 4 609 252 59 0 0 chr17 3273455 3273489 -91999162 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 4 609 459 0 0 0 chr17 3274132 3274183 -91998468 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 4 609 320 215 108 0 chr17 3274205 3274270 -91998381 + B3A SINE B2 59 130 -68 4 609 213 205 0 0 chr17 3274276 3274315 -91998336 + (CAGA)n Simple_repeat Simple_repeat 4 42 0 4 609 324 0 0 0 chr17 3274323 3274359 -91998292 + (GA)n Simple_repeat Simple_repeat 2 37 0 4 609 419 223 106 0 chr17 3274538 3274632 -91998019 - PB1D10 SINE Alu -9 108 5 4 609 545 129 11 0 chr17 3275513 3275606 -91997045 + (TC)n Simple_repeat Simple_repeat 1 94 0 4 609 659 311 82 0 chr17 3275627 3275823 -91996828 - B4A SINE B4 0 292 81 4 609 446 251 0 13 chr17 3275849 3275955 -91996696 - B4 SINE B4 -187 105 2 4 610 397 280 58 36 chr17 3276823 3276960 -91995691 + RSINE1 SINE B4 2 141 -24 4 610 377 129 0 14 chr17 3277084 3277155 -91995496 + (CTAA)n Simple_repeat Simple_repeat 3 72 0 4 610 306 285 70 42 chr17 3277237 3277380 -91995271 - B1F1 SINE Alu 0 149 3 4 610 1373 73 23 0 chr17 3277422 3277599 -91995052 + B2_Mm2 SINE B2 1 181 -14 4 610 1088 117 0 0 chr17 3277639 3277784 -91994867 + B1_Mus2 SINE Alu 3 147 0 4 610 465 66 0 0 chr17 3277784 3277845 -91994806 + (GA)n Simple_repeat Simple_repeat 2 62 0 4 610 709 146 11 81 chr17 3277843 3277916 -91994735 + polypurine Low_complexity Low_complexity 2 70 0 4 610 1198 55 0 0 chr17 3277916 3278062 -91994589 + B1_Mus1 SINE Alu 1 146 -2 4 610 709 146 11 81 chr17 3278062 3278174 -91994477 + polypurine Low_complexity Low_complexity 71 174 0 4 610 1358 237 31 88 chr17 3278243 3278631 -91994020 - ORR1D2 LTR MaLR -4 366 1 4 610 993 84 13 7 chr17 3278729 3278884 -91993767 + (TTCTCC)n Simple_repeat Simple_repeat 6 161 0 4 610 519 17 0 0 chr17 3278916 3278976 -91993675 + (TC)n Simple_repeat Simple_repeat 2 61 0 4 610 785 67 9 0 chr17 3278989 3279094 -91993557 - B2_Mm2 SINE B2 -88 107 2 4 610 264 200 0 0 chr17 3279095 3279150 -91993501 + CT-rich Low_complexity Low_complexity 2 56 0 4 610 1283 255 117 24 chr17 3279167 3279508 -91993143 - Lx5 LINE L1 -17 7033 6661 4 610 988 230 28 0 chr17 3279902 3280119 -91992532 - ID_B1 SINE B4 0 224 2 4 610 24 0 0 0 chr17 3280353 3280377 -91992274 + AT_rich Low_complexity Low_complexity 1 24 0 4 610 279 0 0 0 chr17 3280696 3280727 -91991924 + (TTA)n Simple_repeat Simple_repeat 2 32 0 4 610 447 130 0 0 chr17 3281338 3281415 -91991236 + (TG)n Simple_repeat Simple_repeat 1 77 0 4 610 572 276 136 132 chr17 3281422 3281664 -91990987 - B4 SINE B4 -49 243 1 4 610 908 193 103 10 chr17 3281701 3281895 -91990756 - B3 SINE B2 -2 214 3 4 610 2168 152 74 8 chr17 3283362 3283754 -91988897 - MTC LTR MaLR 0 421 4 4 610 562 260 31 6 chr17 3284110 3284249 -91988402 - B3A SINE B2 -53 142 1 4 610 472 203 16 16 chr17 3284256 3284381 -91988270 + CT-rich Low_complexity Low_complexity 3 127 0 4 610 264 182 0 0 chr17 3284437 3284481 -91988170 + RMER17C LTR ERVK 1 44 -366 4 610 311 260 40 0 chr17 3284509 3284595 -91988056 - PB1D7 SINE Alu -7 113 15 4 610 933 238 36 40 chr17 3285744 3285994 -91986657 + B4A SINE B4 2 250 -42 4 610 496 212 15 0 chr17 3286052 3286189 -91986462 + (CA)n Simple_repeat Simple_repeat 2 140 0 4 610 985 188 96 0 chr17 3287079 3287112 -91985539 - B3 SINE B2 0 216 166 4 610 351 0 0 0 chr17 3287112 3287151 -91985500 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 610 985 188 96 0 chr17 3287151 3287314 -91985337 - B3 SINE B2 -51 165 2 4 610 408 261 0 11 chr17 3287847 3287936 -91984715 + PB1D10 SINE Alu 3 90 -27 4 610 300 120 0 0 chr17 3288166 3288216 -91984435 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 610 279 184 35 0 chr17 3288262 3288349 -91984302 + (CACCC)n Simple_repeat Simple_repeat 3 92 0 4 610 622 207 17 33 chr17 3288349 3288469 -91984182 - B3A SINE B2 -79 119 2 4 610 598 225 11 130 chr17 3288473 3288657 -91983994 - B3A SINE B2 0 198 37 4 610 1698 88 71 8 chr17 3289588 3289841 -91982810 - MTC LTR MaLR -45 376 108 4 610 197 302 44 41 chr17 3290486 3290619 -91982032 + MIRm SINE MIR 113 247 -21 4 610 189 0 0 0 chr17 3290825 3290846 -91981805 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 610 286 170 0 0 chr17 3292011 3292058 -91980593 - RMER17C LTR ERVK -363 47 1 4 610 1425 71 21 11 chr17 3292069 3292255 -91980396 - B2_Mm2 SINE B2 -7 188 1 4 610 616 303 133 42 chr17 3292266 3292552 -91980099 - ORR1D2 LTR MaLR -50 320 9 4 610 917 224 45 32 chr17 3292755 3292976 -91979675 + ID_B1 SINE B4 1 224 0 4 610 258 271 34 0 chr17 3293496 3293555 -91979096 - tRNA-Ala-GCY_ tRNA tRNA -13 62 2 4 610 185 356 112 28 chr17 3293677 3293891 -91978760 + MIR SINE MIR 5 236 -26 4 610 207 182 0 0 chr17 3294970 3295003 -91977648 + polypurine Low_complexity Low_complexity 4 36 0 4 610 464 314 0 54 chr17 3295937 3296085 -91976566 + ID_B1 SINE B4 79 218 -6 4 610 483 167 115 0 chr17 3296096 3296192 -91976459 + PB1D9 SINE Alu 2 108 -12 4 610 22 0 0 0 chr17 3296351 3296373 -91976278 + AT_rich Low_complexity Low_complexity 1 22 0 4 610 251 222 68 27 chr17 3296453 3296527 -91976124 + ID4 SINE ID 3 79 -4 4 610 218 222 22 0 chr17 3296616 3296661 -91975990 + ID SINE ID 35 80 -144 4 610 1172 205 122 89 chr17 3296924 3297261 -91975390 + ORR1B1 LTR MaLR 47 394 0 4 610 343 218 21 18 chr17 3297487 3297600 -91975051 + PB1D7 SINE Alu 1 114 -6 4 610 1185 55 0 7 chr17 3298524 3298672 -91973979 - B1_Mm SINE Alu 0 147 1 4 610 757 110 0 16 chr17 3298874 3299003 -91973648 + (TTC)n Simple_repeat Simple_repeat 3 129 0 4 610 307 191 43 14 chr17 3299016 3299038 -91973613 - B1F SINE Alu 0 149 129 4 610 396 0 0 0 chr17 3299038 3299082 -91973569 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 610 307 191 43 14 chr17 3299082 3299128 -91973523 - B1F SINE Alu -21 128 80 4 610 509 262 65 8 chr17 3299128 3299251 -91973400 - B1F SINE Alu -19 130 1 4 610 195 300 0 0 chr17 3299812 3299862 -91972789 + L2b LINE L2 3245 3294 -81 4 610 1500 28 60 0 chr17 3300500 3300682 -91971969 + B2_Mm1t SINE B2 1 193 0 4 610 292 254 14 0 chr17 3300854 3300925 -91971726 + ID4 SINE ID 5 76 -7 4 610 222 208 0 0 chr17 3300925 3300973 -91971678 + (CACG)n Simple_repeat Simple_repeat 4 51 0 4 610 313 210 0 39 chr17 3301376 3301480 -91971171 + (TATG)n Simple_repeat Simple_repeat 2 101 0 4 610 591 209 11 22 chr17 3301491 3301672 -91970979 + (TATG)n Simple_repeat Simple_repeat 2 180 0 4 610 500 177 34 13 chr17 3301685 3301834 -91970817 + (TATG)n Simple_repeat Simple_repeat 4 155 0 4 610 281 297 34 67 chr17 3302742 3302861 -91969790 - L2b LINE L2 -9 3366 3252 4 610 891 301 47 33 chr17 3303013 3303442 -91969209 - L1MA6 LINE L1 -1 6299 5865 4 610 369 93 0 0 chr17 3303447 3303501 -91969150 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 610 323 281 31 115 chr17 3303530 3303592 -91969059 - L1MA5A LINE L1 -710 5926 5868 5 610 510 17 0 0 chr17 3303592 3303651 -91969000 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 610 323 312 20 35 chr17 3303651 3303680 -91968971 - L1MA5A LINE L1 -13 5870 5840 5 610 890 298 54 14 chr17 3303680 3303959 -91968692 - B4A SINE B4 0 292 3 5 610 513 301 68 7 chr17 3303959 3304151 -91968500 - L1MA5A LINE L1 -434 5863 5674 5 610 221 57 0 28 chr17 3304497 3304533 -91968118 + (TTTTG)n Simple_repeat Simple_repeat 5 39 0 5 610 466 222 85 79 chr17 3305416 3305436 -91967215 - ID_B1 SINE B4 -47 245 163 5 610 524 214 76 8 chr17 3305436 3305568 -91967083 - B1F1 SINE Alu 0 149 9 5 610 466 222 85 79 chr17 3305568 3305587 -91967064 - ID_B1 SINE B4 -47 162 73 5 610 469 237 46 121 chr17 3306679 3306852 -91965799 + ID_B1 SINE B4 65 224 0 5 610 245 292 108 0 chr17 3306852 3306917 -91965734 + ID4_ SINE ID 2 73 -10 5 610 714 181 0 0 chr17 3306928 3307207 -91965444 + (CA)n Simple_repeat Simple_repeat 1 279 0 5 610 405 228 0 0 chr17 3307238 3307405 -91965246 + (CA)n Simple_repeat Simple_repeat 1 167 0 5 610 251 339 50 8 chr17 3307418 3307537 -91965114 - MIR SINE MIR -111 151 28 5 610 186 40 0 0 chr17 3307799 3307816 -91964835 + (TTTG)n Simple_repeat Simple_repeat 4 20 0 5 610 1035 84 35 0 chr17 3307816 3307958 -91964693 - B1_Mus2 SINE Alu 0 147 1 5 610 186 40 0 0 chr17 3307958 3307965 -91964686 + (TTTG)n Simple_repeat Simple_repeat 1 7 0 5 610 741 279 4 35 chr17 3307965 3308192 -91964459 - ID_B1 SINE B4 0 224 5 5 610 755 126 8 0 chr17 3308986 3309113 -91963538 + (TTTC)n Simple_repeat Simple_repeat 2 129 0 5 610 278 287 116 11 chr17 3309911 3310006 -91962645 - PB1D10 SINE Alu -12 105 1 5 610 546 284 29 22 chr17 3310549 3310686 -91961965 + ID_B1 SINE B4 79 216 -8 5 610 376 19 19 19 chr17 3311765 3311819 -91960832 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 610 270 0 0 0 chr17 3314069 3314099 -91958552 + (T)n Simple_repeat Simple_repeat 1 30 0 5 610 571 210 8 48 chr17 3314877 3315002 -91957649 + PB1D7 SINE Alu 1 120 0 5 610 413 259 123 18 chr17 3315009 3315123 -91957528 + ID_B1 SINE B4 96 221 -3 5 610 353 288 25 59 chr17 3316464 3316582 -91956069 + PB1D10 SINE Alu 3 116 -1 5 610 207 69 0 0 chr17 3317342 3317371 -91955280 + (CAAAAA)n Simple_repeat Simple_repeat 3 31 0 5 610 516 191 13 0 chr17 3317646 3317737 -91954914 - ID_B1 SINE B4 -199 93 1 5 610 657 220 112 93 chr17 3318241 3318446 -91954205 + ID_B1 SINE B4 3 211 -13 5 610 543 248 0 8 chr17 3318469 3318587 -91954064 + ID_B1 SINE B4 108 224 0 5 610 235 336 43 36 chr17 3318587 3318608 -91954043 - YREP_Mm Unknown Unknown -1522 290 151 5 610 852 190 54 178 chr17 3319027 3319439 -91953212 - ORR1C2 LTR MaLR -6 378 31 5 610 4688 148 13 85 chr17 3319446 3320361 -91952290 + RMER12 LTR ERVK 9 857 -465 5 610 309 118 0 0 chr17 3320361 3320412 -91952239 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 610 456 293 84 37 chr17 3320412 3320517 -91952134 + RLTR21 LTR ERVK 1306 1411 -161 5 610 269 231 0 37 chr17 3320555 3320636 -91952015 + G-rich Low_complexity Low_complexity 6 83 0 5 610 337 142 0 13 chr17 3320668 3320731 -91951920 + RLTR21 LTR ERVK 1527 1572 0 5 610 1107 105 0 0 chr17 3320851 3320994 -91951657 + B1_Mur4 SINE Alu 2 144 -6 5 610 318 244 68 185 chr17 3321223 3321369 -91951282 + ID_B1 SINE B4 6 134 -90 5 610 319 269 97 97 chr17 3321572 3321716 -91950935 + B4 SINE B4 75 218 -74 5 610 748 188 23 0 chr17 3321590 3321723 -91950928 + B1F1 SINE Alu 13 148 -1 5 610 269 333 139 20 chr17 3321969 3322070 -91950581 - RMER30 DNA MER1_type -51 151 39 5 610 207 167 0 0 chr17 3322318 3322360 -91950291 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 610 424 277 29 10 chr17 3322420 3322522 -91950129 - PB1D7 SINE Alu -15 105 2 5 610 1292 271 23 62 chr17 3323650 3324035 -91948616 + MTEa LTR MaLR 2 371 -8 5 610 723 164 129 56 chr17 3324101 3324401 -91948250 - RMER17C LTR ERVK 0 410 89 5 610 402 111 0 0 chr17 3324401 3324455 -91948196 + B2_Mm2 SINE B2 2 55 -140 5 610 398 38 19 0 chr17 3324461 3324514 -91948137 + B2_Mm1t SINE B2 126 179 -14 5 610 237 178 22 0 chr17 3324520 3324565 -91948086 + ID4_ SINE ID 38 83 0 5 610 630 173 39 0 chr17 3324558 3324662 -91947989 - RMER17C LTR ERVK -302 108 1 5 610 1430 72 0 6 chr17 3324695 3324877 -91947774 - B2_Mm2 SINE B2 -14 181 1 5 610 656 216 143 6 chr17 3325083 3325251 -91947400 - B3 SINE B2 -10 206 16 5 610 1086 140 0 0 chr17 3325275 3325454 -91947197 + (CA)n Simple_repeat Simple_repeat 1 179 0 5 610 425 278 100 97 chr17 3325669 3325948 -91946703 + RMER15 LTR ERVL 283 562 -13 5 610 405 0 0 0 chr17 3326422 3326467 -91946184 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 610 454 119 0 23 chr17 3327852 3327938 -91944713 + (TTCC)n Simple_repeat Simple_repeat 1 84 0 5 610 433 175 235 10 chr17 3327967 3328065 -91944586 + PB1D9 SINE Alu 1 120 0 5 610 211 205 0 0 chr17 3328066 3328105 -91944546 + A-rich Low_complexity Low_complexity 5 43 0 5 610 411 219 226 9 chr17 3328141 3328256 -91944395 + B3A SINE B2 6 145 -53 5 610 429 116 0 0 chr17 3328256 3328325 -91944326 + (TCC)n Simple_repeat Simple_repeat 2 70 0 5 610 469 211 0 0 chr17 3328636 3328731 -91943920 + PB1D10 SINE Alu 5 99 -18 5 610 248 258 0 143 chr17 3328761 3328838 -91943813 + B1_Mus1 SINE Alu 11 76 -72 5 610 193 295 67 11 chr17 3329042 3329131 -91943520 + L2c LINE L2 3059 3152 -235 5 610 252 364 118 28 chr17 3329215 3329359 -91943292 + MER91A DNA Tip100 28 184 -12 5 610 1633 37 5 0 chr17 3329738 3329928 -91942723 - B2_Mm1a SINE B2 -1 192 2 5 610 248 309 142 35 chr17 3330411 3330552 -91942099 - MIR3 SINE MIR -43 165 10 5 610 186 320 0 0 chr17 3330996 3331046 -91941605 + MIRc SINE MIR 181 230 -38 5 610 21 0 0 0 chr17 3331118 3331139 -91941512 + AT_rich Low_complexity Low_complexity 1 21 0 5 610 507 301 65 7 chr17 3332224 3332378 -91940273 + ID_B1 SINE B4 1 163 -61 5 610 342 292 62 55 chr17 3332386 3332415 -91940236 + L1MEf LINE L1 1964 1991 -4251 5 610 1097 95 0 20 chr17 3332415 3332565 -91940086 + B1_Mus2 SINE Alu 1 147 0 5 610 365 259 107 10 chr17 3332565 3332700 -91939951 + L1MEf LINE L1 3081 3204 -2942 5 610 524 95 0 12 chr17 3332714 3332799 -91939852 + (TTCC)n Simple_repeat Simple_repeat 1 84 0 5 610 613 210 140 0 chr17 3333305 3333462 -91939189 - B3 SINE B2 -37 179 1 5 610 538 276 0 0 chr17 3333482 3333598 -91939053 - B4A SINE B4 -71 221 106 5 610 25 51 0 0 chr17 3334319 3334358 -91938293 + AT_rich Low_complexity Low_complexity 1 39 0 5 610 865 253 0 5 chr17 3335186 3335377 -91937274 + B4A SINE B4 3 192 -100 5 610 258 260 82 10 chr17 3335462 3335559 -91937092 - B3A SINE B2 -94 104 1 5 610 871 241 49 10 chr17 3335724 3335929 -91936722 - B3 SINE B2 -3 213 1 5 610 237 217 0 0 chr17 3336020 3336066 -91936585 - PB1D10 SINE Alu 0 117 72 5 610 344 289 124 8 chr17 3337795 3337924 -91934727 - PB1D10 SINE Alu -5 144 1 5 610 285 250 15 0 chr17 3339681 3339749 -91932902 - ID4 SINE ID -13 70 2 5 610 698 267 52 0 chr17 3340325 3340516 -91932135 + B4A SINE B4 36 236 -56 5 610 450 297 40 74 chr17 3340517 3340666 -91931985 + RSINE1 SINE B4 5 148 -17 5 610 775 267 6 0 chr17 3341097 3341273 -91931378 + B3A SINE B2 1 177 -21 5 610 251 355 53 29 chr17 3341580 3341786 -91930865 + L1MC LINE L1 5586 5796 -2086 5 610 443 208 9 54 chr17 3342132 3342244 -91930407 - PB1D9 SINE Alu -1 119 13 5 610 231 235 22 66 chr17 3342173 3342264 -91930387 - B4A SINE B4 -123 169 83 5 610 296 333 83 5 chr17 3342417 3342610 -91930041 - L1M3 LINE L1 -448 5723 5516 5 610 407 263 0 34 chr17 3343829 3343947 -91928704 - PB1D10 SINE Alu -3 114 1 5 610 366 23 0 0 chr17 3344065 3344108 -91928543 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 610 270 0 0 0 chr17 3344108 3344137 -91928514 + (GA)n Simple_repeat Simple_repeat 1 30 0 5 610 552 243 56 28 chr17 3345768 3345912 -91926739 + B1_Mur3 SINE Alu 2 149 0 5 610 25 0 0 0 chr17 3345955 3345980 -91926671 + AT_rich Low_complexity Low_complexity 1 25 0 5 610 365 235 152 29 chr17 3347560 3347665 -91924986 - PB1D7 SINE Alu 0 120 3 5 610 270 0 0 0 chr17 3347735 3347765 -91924886 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 610 23 0 0 0 chr17 3348129 3348152 -91924499 + AT_rich Low_complexity Low_complexity 1 23 0 5 610 285 29 0 0 chr17 3348220 3348254 -91924397 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 610 319 304 54 59 chr17 3348265 3348529 -91924122 - B4 SINE B4 -12 280 45 5 610 418 237 84 49 chr17 3348553 3348695 -91923956 - B1F SINE Alu -2 147 1 5 610 248 218 78 10 chr17 3348864 3348966 -91923685 - L1_Mur3 LINE L1 -1403 4477 4369 5 610 535 51 25 0 chr17 3348991 3349070 -91923581 + (TA)n Simple_repeat Simple_repeat 1 81 0 5 610 296 48 0 23 chr17 3349116 3349159 -91923492 + (TA)n Simple_repeat Simple_repeat 1 42 0 5 610 334 157 214 76 chr17 3349160 3349291 -91923360 - L1_Mur3 LINE L1 -1527 4353 4205 5 610 744 320 117 48 chr17 3349273 3349818 -91922833 + Lx8 LINE L1 6891 7473 0 5 610 251 200 0 0 chr17 3349840 3349885 -91922766 + ZP3AR Satellite Satellite 42 86 -126 5 610 246 280 104 26 chr17 3349841 3349918 -91922733 + ID4 SINE ID 1 83 0 5 610 793 159 0 35 chr17 3350431 3350574 -91922077 - B1_Mur2 SINE Alu -11 138 1 5 610 31 0 0 0 chr17 3350791 3350822 -91921829 + AT_rich Low_complexity Low_complexity 1 31 0 6 610 470 228 0 50 chr17 3350900 3351020 -91921631 - PB1D7 SINE Alu -2 118 5 6 610 303 278 11 32 chr17 3351395 3351488 -91921163 + PB1 SINE Alu 1 91 -36 6 610 635 76 0 21 chr17 3353421 3353515 -91919136 - B1_Mus2 SINE Alu -6 141 50 6 610 233 229 0 79 chr17 3353468 3353544 -91919107 - RLTR25A LTR ERVK -533 570 501 6 610 197 177 12 37 chr17 3354324 3354406 -91918245 + CT-rich Low_complexity Low_complexity 1 80 0 6 610 369 0 0 0 chr17 3354946 3354987 -91917664 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 610 444 235 178 36 chr17 3355484 3355862 -91916789 - L1M3 LINE L1 -605 5695 5294 6 610 426 293 76 45 chr17 3355887 3356044 -91916607 - RSINE1 SINE B4 0 165 4 6 610 237 261 46 0 chr17 3356088 3356153 -91916498 - L1M3 LINE L1 -865 5275 5208 6 610 299 263 92 123 chr17 3357140 3357270 -91915381 - B4A SINE B4 -164 128 3 6 610 574 198 6 6 chr17 3357675 3357838 -91914813 + (CA)n Simple_repeat Simple_repeat 1 163 0 6 610 1216 29 0 0 chr17 3358073 3358211 -91914440 - B1_Mm SINE Alu -8 139 2 6 610 981 138 122 0 chr17 3358411 3358607 -91914044 + URR1A DNA MER1_type 1 220 -6 6 610 248 149 0 21 chr17 3359149 3359197 -91913454 + URR1A DNA MER1_type 179 225 -1 6 610 186 71 0 0 chr17 3360250 3360278 -91912373 + (T)n Simple_repeat Simple_repeat 1 28 0 6 610 901 158 128 16 chr17 3360467 3360654 -91911997 + URR1A DNA MER1_type 1 208 -18 6 610 250 333 0 0 chr17 3361270 3361450 -91911201 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 610 438 20 0 0 chr17 3361762 3361813 -91910838 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 610 538 298 0 0 chr17 3361825 3361949 -91910702 - RSINE1 SINE B4 -40 125 2 6 610 2994 86 104 81 chr17 3362336 3362843 -91909808 + MURVY-LTR LTR ERV1 1 519 0 6 610 243 270 0 31 chr17 3363248 3363313 -91909338 + ID SINE ID 1 63 -161 6 610 30 27 0 0 chr17 3363736 3363773 -91908878 + AT_rich Low_complexity Low_complexity 1 37 0 6 610 395 118 13 13 chr17 3364124 3364201 -91908450 + URR1A DNA MER1_type 77 153 -73 6 610 1893 102 9 22 chr17 3364519 3364881 -91907770 - ORR1A4 LTR MaLR -9 337 5 6 610 553 202 13 70 chr17 3364884 3365056 -91907595 - ORR1E LTR MaLR -211 148 2 6 610 4222 93 15 8 chr17 3365185 3365771 -91906880 - L1_Mus1 LINE L1 0 6567 5978 6 610 674 309 18 55 chr17 3366802 3367076 -91905575 - B4A SINE B4 -17 275 12 6 610 640 113 83 28 chr17 3367162 3367271 -91905380 - PB1D9 SINE Alu -1 119 5 6 610 580 273 79 0 chr17 3367312 3367477 -91905174 - RLTR40 LTR ERVK -23 794 617 6 610 2228 82 3 0 chr17 3367513 3367831 -91904820 - ORR1A2 LTR MaLR -8 319 1 6 610 213 39 0 0 chr17 3367901 3367927 -91904724 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 610 312 91 0 0 chr17 3367931 3367975 -91904676 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 6 610 495 277 0 41 chr17 3367992 3368139 -91904512 - B1F2 SINE Alu 0 149 9 6 610 793 200 66 40 chr17 3368211 3368409 -91904242 - B3 SINE B2 -5 211 9 6 610 212 317 18 36 chr17 3368765 3368932 -91903719 + (TATATG)n Simple_repeat Simple_repeat 3 166 0 6 610 483 176 0 0 chr17 3370791 3370882 -91901769 + A-rich Low_complexity Low_complexity 1 91 0 6 610 880 257 24 19 chr17 3372329 3372539 -91900112 + B3 SINE B2 2 212 -4 6 610 836 69 0 0 chr17 3373037 3373153 -91899498 + URR1A DNA MER1_type 110 225 -1 6 610 1047 58 0 0 chr17 3373169 3373307 -91899344 + B1_Mm SINE Alu 10 147 0 6 610 615 239 56 14 chr17 3373706 3373850 -91898801 + RSINE1 SINE B4 1 150 -15 6 610 346 340 24 73 chr17 3374409 3374574 -91898077 + RSINE1 SINE B4 9 165 0 6 610 477 292 7 14 chr17 3374721 3374860 -91897791 + B4 SINE B4 2 139 -153 6 610 21 0 0 0 chr17 3374981 3375002 -91897649 + GC_rich Low_complexity Low_complexity 1 21 0 6 610 368 247 10 20 chr17 3375480 3375579 -91897072 + B4 SINE B4 119 216 -76 6 610 288 170 0 0 chr17 3375580 3375633 -91897018 + (CTAA)n Simple_repeat Simple_repeat 4 56 0 6 610 231 290 0 0 chr17 3375675 3375737 -91896914 + (CATATA)n Simple_repeat Simple_repeat 3 64 0 6 610 253 264 108 21 chr17 3375891 3375984 -91896667 - B1_Mm SINE Alu -34 113 13 6 610 667 246 35 0 chr17 3376728 3376870 -91895781 + B3 SINE B2 3 149 -67 6 610 408 20 0 0 chr17 3376873 3376922 -91895729 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 610 478 345 31 16 chr17 3377164 3377420 -91895231 - Tigger5 DNA MER2_type -9 2397 2138 6 610 582 219 39 25 chr17 3378176 3378354 -91894297 - B3 SINE B2 0 195 10 6 610 284 0 28 0 chr17 3378680 3378716 -91893935 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 6 610 404 326 105 18 chr17 3378863 3379197 -91893454 - Tigger10 DNA Tigger -68 1775 1413 6 610 238 300 108 9 chr17 3379499 3379610 -91893041 + B3A SINE B2 59 180 -18 6 610 390 127 0 0 chr17 3379790 3379861 -91892790 + (C)n Simple_repeat Simple_repeat 1 71 0 6 610 250 242 30 0 chr17 3380241 3380307 -91892344 - MTEa LTR MaLR -30 329 262 6 610 531 275 70 51 chr17 3380328 3380543 -91892108 - MTEa LTR MaLR -160 219 1 6 610 285 196 75 38 chr17 3380635 3380731 -91891920 + B1_Mus1 SINE Alu 2 102 -18 6 610 270 291 0 0 chr17 3381147 3381257 -91891394 + (TG)n Simple_repeat Simple_repeat 1 110 0 6 610 832 294 70 7 chr17 3381269 3381540 -91891111 - B4A SINE B4 0 292 5 6 610 345 208 0 0 chr17 3381869 3381946 -91890705 + (TA)n Simple_repeat Simple_repeat 2 78 0 6 610 198 0 0 0 chr17 3381948 3381970 -91890681 + (CA)n Simple_repeat Simple_repeat 2 23 0 6 610 428 274 0 34 chr17 3382901 3383018 -91889633 - PB1D7 SINE Alu -6 114 2 6 610 769 165 0 0 chr17 3383085 3383206 -91889445 + (CAGAGA)n Simple_repeat Simple_repeat 2 122 0 6 610 411 180 9 115 chr17 3383206 3383319 -91889332 + B1_Mur4 SINE Alu 43 143 -7 6 610 237 197 14 14 chr17 3383322 3383394 -91889257 + (CAAA)n Simple_repeat Simple_repeat 1 72 0 6 610 911 233 13 140 chr17 3383758 3384072 -91888579 - ORR1D2 LTR MaLR -100 274 1 6 610 602 197 7 0 chr17 3384171 3384308 -91888343 + CT-rich Low_complexity Low_complexity 2 139 0 6 610 492 18 0 0 chr17 3384340 3384397 -91888254 + (TTTC)n Simple_repeat Simple_repeat 3 59 0 6 610 711 104 0 0 chr17 3384397 3384503 -91888148 + (TCCC)n Simple_repeat Simple_repeat 4 109 0 6 610 738 76 9 0 chr17 3384525 3384630 -91888021 - B2_Mm2 SINE B2 -88 107 2 6 610 590 223 13 8 chr17 3384795 3384945 -91887706 + B1F2 SINE Alu 1 149 0 6 610 1195 55 0 7 chr17 3385042 3385190 -91887461 - B1_Mus1 SINE Alu -1 147 1 6 610 333 316 0 0 chr17 3385190 3385269 -91887382 - RSINE1 SINE B4 -66 99 21 6 610 427 272 17 17 chr17 3385317 3385433 -91887218 - PB1D7 SINE Alu -4 116 1 6 610 1669 37 0 0 chr17 3386127 3386318 -91886333 - B2_Mm1a SINE B2 -1 192 2 6 610 319 282 118 163 chr17 3386499 3386745 -91885906 - B4 SINE B4 0 292 58 6 610 263 311 18 88 chr17 3387059 3387172 -91885479 + RMER15 LTR ERVL 345 449 -126 6 610 1065 272 28 53 chr17 3387175 3387529 -91885122 - Lx6 LINE L1 -704 6354 5961 6 610 605 321 71 22 chr17 3387539 3387765 -91884886 + Lx5 LINE L1 6506 6742 -308 6 610 807 239 80 56 chr17 3388190 3388218 -91884433 + Lx6 LINE L1 7136 7172 -288 6 610 216 0 0 0 chr17 3388218 3388242 -91884409 + (TGGGGG)n Simple_repeat Simple_repeat 1 24 0 6 610 807 239 80 56 chr17 3388242 3388501 -91884150 + Lx6 LINE L1 7173 7430 -30 6 610 396 176 137 0 chr17 3388724 3388826 -91883825 + RSINE1 SINE B4 2 117 -48 6 610 653 279 39 35 chr17 3389563 3389859 -91882792 - L1MA4 LINE L1 -374 5938 5642 6 610 835 232 98 0 chr17 3390128 3390322 -91882329 - B3 SINE B2 0 216 4 6 610 198 0 0 0 chr17 3390801 3390823 -91881828 + (TTG)n Simple_repeat Simple_repeat 3 24 0 6 610 252 0 0 0 chr17 3390823 3390851 -91881800 + (TGG)n Simple_repeat Simple_repeat 1 28 0 6 610 3562 52 2 2 chr17 3391010 3391451 -91881200 - L1_Mus1 LINE L1 -2 6565 6125 6 610 1950 48 0 0 chr17 3391451 3391681 -91880970 + L1Md_F2 LINE L1 5357 5586 -297 6 610 7708 70 5 5 chr17 3391682 3392677 -91879974 + L1Md_F2 LINE L1 5588 6582 0 6 610 198 26 24 49 chr17 3392699 3392740 -91879911 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 6 610 1214 61 0 0 chr17 3392740 3392887 -91879764 - B1_Mus1 SINE Alu -1 147 1 6 610 550 371 44 25 chr17 3393210 3393686 -91878965 - Lx8 LINE L1 -5 7468 6984 6 610 561 299 114 16 chr17 3394765 3395010 -91877641 - B4A SINE B4 -17 275 7 6 610 361 297 17 43 chr17 3395303 3395419 -91877232 - PB1D7 SINE Alu -7 113 1 6 610 274 303 85 72 chr17 3395902 3396055 -91876596 - B4A SINE B4 -127 165 11 6 610 414 0 0 0 chr17 3396141 3396187 -91876464 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 610 1092 126 21 32 chr17 3396327 3396516 -91876135 + B2_Mm2 SINE B2 1 187 -8 6 610 21 0 0 0 chr17 3397608 3397629 -91875022 + GC_rich Low_complexity Low_complexity 1 21 0 6 610 226 303 0 0 chr17 3399388 3399454 -91873197 - ID4 SINE ID 0 83 18 6 610 234 0 0 0 chr17 3399455 3399481 -91873170 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 610 553 203 119 0 chr17 3399608 3399726 -91872925 - B1_Mur2 SINE Alu 0 149 18 6 610 183 178 28 56 chr17 3400119 3400262 -91872389 + CT-rich Low_complexity Low_complexity 3 141 0 6 610 264 220 92 92 chr17 3400738 3400858 -91871793 - MLT1A1 LTR MaLR -281 127 8 6 610 315 308 75 25 chr17 3400942 3401102 -91871549 - MLT1C LTR MaLR -71 396 229 6 610 1152 262 104 3 chr17 3402828 3403165 -91869486 - MTE2b LTR MaLR 0 379 9 7 610 3339 50 2 2 chr17 3403249 3403649 -91869002 - MTB LTR MaLR 0 400 1 7 610 472 259 58 29 chr17 3403851 3403990 -91868661 - ID_B1 SINE B4 0 224 82 7 610 210 71 0 0 chr17 3404796 3404824 -91867827 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 7 610 743 287 29 81 chr17 3404835 3405142 -91867509 + B4 SINE B4 2 292 0 7 610 495 0 0 0 chr17 3406444 3406499 -91866152 + (TC)n Simple_repeat Simple_repeat 2 56 0 7 610 180 0 0 0 chr17 3406710 3406730 -91865921 + (TTG)n Simple_repeat Simple_repeat 2 21 0 7 611 2532 74 12 0 chr17 3409074 3409397 -91863254 + ORR1A2 LTR MaLR 1 327 0 7 611 1610 88 23 23 chr17 3409397 3409654 -91862997 + ORR1A2-int LTR MaLR 1 257 -1706 7 611 21 89 0 0 chr17 3409850 3409906 -91862745 + AT_rich Low_complexity Low_complexity 1 56 0 7 611 743 254 51 41 chr17 3410836 3411033 -91861618 + ID_B1 SINE B4 15 213 -11 7 611 875 133 13 0 chr17 3411050 3411200 -91861451 + (TCTCC)n Simple_repeat Simple_repeat 2 153 0 7 611 350 158 8 16 chr17 3411204 3411336 -91861315 + CT-rich Low_complexity Low_complexity 1 130 0 7 611 225 326 107 17 chr17 3411364 3411542 -91861109 + L1MB3 LINE L1 5989 6182 -1 7 611 310 356 29 15 chr17 3412165 3412302 -91860349 - RSINE1 SINE B4 -9 156 18 7 611 553 278 67 72 chr17 3412377 3412586 -91860065 - ID_B1 SINE B4 -8 216 9 7 611 243 300 114 26 chr17 3415439 3415670 -91856981 - MLT1A LTR MaLR -43 322 79 7 611 977 81 81 0 chr17 3415981 3416117 -91856534 + B1_Mm SINE Alu 1 147 0 7 611 288 137 0 0 chr17 3416147 3416198 -91856453 + (TC)n Simple_repeat Simple_repeat 1 51 0 7 611 441 95 0 0 chr17 3416198 3416261 -91856390 + (TG)n Simple_repeat Simple_repeat 2 64 0 7 611 333 214 0 14 chr17 3416263 3416334 -91856317 - ID4 SINE ID -11 72 3 7 611 441 248 55 34 chr17 3417491 3417637 -91855014 + B1F SINE Alu 1 149 0 7 611 331 193 12 12 chr17 3417637 3417721 -91854930 + GA-rich Low_complexity Low_complexity 1 84 0 7 611 234 0 0 0 chr17 3417792 3417818 -91854833 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 611 306 0 0 0 chr17 3417818 3417851 -91854800 + (GA)n Simple_repeat Simple_repeat 2 35 0 7 611 355 364 89 19 chr17 3418155 3418424 -91854227 - MLT1I LTR MaLR -76 335 48 7 611 421 319 68 36 chr17 3418654 3418904 -91853747 - L1MA9 LINE L1 0 6312 6055 7 611 469 214 112 22 chr17 3420187 3420321 -91852330 - B1F SINE Alu -2 147 2 7 611 21 36 0 0 chr17 3420619 3420647 -91852004 + AT_rich Low_complexity Low_complexity 1 28 0 7 611 749 318 16 102 chr17 3421833 3422148 -91850503 - B4 SINE B4 -2 290 3 7 611 232 277 0 0 chr17 3422519 3422566 -91850085 - tRNA-Ala-GCY_ tRNA tRNA -7 68 22 7 611 326 224 20 39 chr17 3423529 3423631 -91849020 - Lx8 LINE L1 -773 6700 6601 7 611 522 254 25 25 chr17 3425389 3425510 -91847141 + B4 SINE B4 1 121 -171 7 611 188 130 55 55 chr17 3425510 3425583 -91847068 + (TAGTG)n Simple_repeat Simple_repeat 3 75 0 7 611 704 195 145 60 chr17 3425583 3425818 -91846833 + RMER4B LTR ERVK 1 255 -330 7 611 462 223 216 65 chr17 3425850 3426078 -91846573 + RMER4B LTR ERVK 342 583 -2 7 611 242 342 0 0 chr17 3426097 3426176 -91846475 + B4A SINE B4 200 278 -14 7 611 1210 48 0 7 chr17 3426746 3426893 -91845758 - B1_Mus2 SINE Alu 0 147 2 7 611 597 204 74 22 chr17 3427928 3428063 -91844588 + B1F SINE Alu 1 142 -7 7 611 830 294 54 82 chr17 3428219 3428608 -91844043 - MTE2a LTR MaLR -1 378 1 7 611 921 270 51 30 chr17 3429550 3429882 -91842769 - MLT1A0 LTR MaLR -22 343 5 7 611 228 143 0 0 chr17 3430129 3430171 -91842480 + (TCTCCC)n Simple_repeat Simple_repeat 5 46 0 7 611 227 208 21 0 chr17 3430808 3430857 -91841794 + CT-rich Low_complexity Low_complexity 1 50 0 7 611 414 0 0 0 chr17 3430857 3430903 -91841748 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 611 208 250 15 15 chr17 3430903 3430920 -91841731 + polypyrimidine Low_complexity Low_complexity 3 19 0 7 611 996 192 58 24 chr17 3430967 3431175 -91841476 + B3 SINE B2 2 216 0 7 611 743 155 0 9 chr17 3431210 3431429 -91841222 + (CA)n Simple_repeat Simple_repeat 1 216 0 7 611 395 309 29 7 chr17 3431605 3431742 -91840909 + B1F SINE Alu 9 148 -1 7 611 378 0 0 0 chr17 3433808 3433850 -91838801 + (TC)n Simple_repeat Simple_repeat 1 42 0 7 611 1015 60 185 7 chr17 3433850 3434001 -91838650 - B2_Mm2 SINE B2 -15 180 3 7 611 386 291 125 8 chr17 3435352 3435480 -91837171 + RSINE1 SINE B4 2 144 -21 7 611 336 24 0 0 chr17 3435486 3435527 -91837124 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 611 246 304 67 29 chr17 3435553 3435658 -91836993 - B1F SINE Alu -40 109 1 7 611 449 265 108 38 chr17 3435658 3435727 -91836924 - ID SINE ID -140 84 5 7 611 899 100 119 7 chr17 3435907 3436058 -91836593 - B2_Mm2 SINE B2 -26 169 2 7 611 898 175 63 11 chr17 3436662 3436853 -91835798 - URR1A DNA MER1_type 0 226 26 7 611 290 325 0 0 chr17 3437709 3437789 -91834862 + B4 SINE B4 1 80 -212 7 611 645 251 16 57 chr17 3437952 3438146 -91834505 + B4A SINE B4 105 290 -2 7 611 709 291 10 21 chr17 3440385 3440578 -91832073 + B3 SINE B2 1 191 -25 7 611 713 238 25 30 chr17 3440597 3440796 -91831855 + B3A SINE B2 1 198 0 7 611 263 231 9 0 chr17 3441494 3441602 -91831049 + (TG)n Simple_repeat Simple_repeat 1 109 0 7 611 342 267 0 0 chr17 3441619 3441791 -91830860 + (TG)n Simple_repeat Simple_repeat 2 173 0 7 611 378 0 0 0 chr17 3443468 3443510 -91829141 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 611 573 86 0 0 chr17 3443562 3443655 -91828996 + (ATG)n Simple_repeat Simple_repeat 1 93 0 7 611 598 154 29 6 chr17 3444281 3444772 -91827879 + (TG)n Simple_repeat Simple_repeat 1 502 0 7 611 641 133 26 17 chr17 3444784 3445019 -91827632 + (TG)n Simple_repeat Simple_repeat 1 237 0 7 611 2495 44 91 3 chr17 3445851 3446169 -91826482 - ORR1A1 LTR MaLR 0 346 1 7 611 228 346 50 38 chr17 3446420 3446579 -91826072 + MIR SINE MIR 10 170 -92 7 611 516 211 102 95 chr17 3447521 3447668 -91824983 - B1_Mur1 SINE Alu -1 148 1 7 611 659 228 0 6 chr17 3449292 3449473 -91823178 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 611 762 181 12 18 chr17 3449434 3449769 -91822882 + (CATATA)n Simple_repeat Simple_repeat 1 332 0 7 611 842 245 25 25 chr17 3450388 3450589 -91822062 - ID_B1 SINE B4 -22 202 2 7 611 343 238 56 56 chr17 3451122 3451229 -91821422 - B3A SINE B2 -11 187 81 7 611 324 167 55 14 chr17 3451217 3451290 -91821361 - B3 SINE B2 -47 169 94 7 611 743 192 6 49 chr17 3451298 3451462 -91821189 - B3A SINE B2 -41 157 1 7 611 341 231 55 94 chr17 3451937 3452058 -91820593 - PB1D7 SINE Alu -3 124 6 7 611 220 195 0 0 chr17 3452398 3452439 -91820212 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 611 379 320 26 45 chr17 3452449 3452603 -91820048 - B4A SINE B4 -127 165 15 7 611 568 290 127 16 chr17 3452774 3453096 -91819555 - L1MB2 LINE L1 -118 6053 5696 7 611 188 216 20 0 chr17 3453528 3453579 -91819072 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 7 611 2725 160 79 6 chr17 3455763 3456153 -91816498 - RLTR11A2 LTR ERVK 0 527 119 7 611 180 0 0 0 chr17 3456153 3456173 -91816478 + (G)n Simple_repeat Simple_repeat 1 20 0 7 611 2725 160 79 6 chr17 3456173 3456273 -91816378 - RLTR11A2 LTR ERVK -409 118 2 7 611 237 333 67 73 chr17 3456565 3456743 -91815908 + LTR16E2 LTR ERVL 291 467 -101 7 611 375 193 32 15 chr17 3456915 3457015 -91815636 + PB1D10 SINE Alu 16 118 -2 7 611 468 0 0 0 chr17 3457493 3457545 -91815106 + (TC)n Simple_repeat Simple_repeat 1 52 0 7 611 737 157 14 0 chr17 3458752 3458899 -91813752 + GA-rich Low_complexity Low_complexity 2 150 0 7 611 1189 124 16 21 chr17 3459110 3459300 -91813351 + B2_Mm2 SINE B2 1 189 -6 7 611 267 327 156 49 chr17 3459328 3459553 -91813098 + MIR SINE MIR 9 257 -5 7 611 456 259 76 25 chr17 3459678 3459797 -91812854 - ID_B1 SINE B4 -97 127 3 7 611 273 270 120 80 chr17 3459905 3460030 -91812621 + MLT1D LTR MaLR 107 236 -269 7 611 228 296 14 40 chr17 3460776 3460850 -91811801 - ID_B1 SINE B4 -67 157 86 7 611 1752 194 65 12 chr17 3461133 3461473 -91811178 + MTD LTR MaLR 5 362 -57 7 611 891 28 0 0 chr17 3461656 3461762 -91810889 + (TTTC)n Simple_repeat Simple_repeat 2 107 0 7 611 761 308 54 74 chr17 3462824 3463122 -91809529 - B4A SINE B4 0 292 1 7 611 23 0 0 0 chr17 3463733 3463756 -91808895 + AT_rich Low_complexity Low_complexity 1 23 0 7 611 425 182 10 0 chr17 3463767 3463866 -91808785 + (TG)n Simple_repeat Simple_repeat 1 100 0 7 611 1073 68 0 7 chr17 3463877 3464025 -91808626 + (GGAGA)n Simple_repeat Simple_repeat 2 148 0 7 611 984 289 11 35 chr17 3466762 3467045 -91805606 + B4 SINE B4 3 278 -14 7 611 459 0 0 0 chr17 3467102 3467153 -91805498 + (GA)n Simple_repeat Simple_repeat 2 52 0 7 611 1154 49 7 14 chr17 3467213 3467359 -91805292 - B1_Mus1 SINE Alu -1 147 3 7 611 249 170 21 0 chr17 3468139 3468186 -91804465 + B2_Mm2 SINE B2 1 48 -147 7 611 753 230 120 42 chr17 3468361 3468670 -91803981 - RLTR15 LTR ERVK -25 334 2 7 611 1107 283 45 62 chr17 3468671 3469025 -91803626 - MTE2b LTR MaLR -31 348 1 7 611 384 275 128 44 chr17 3469437 3469673 -91802978 - MLT1A1 LTR MaLR -2 406 101 7 611 865 275 156 16 chr17 3471344 3471658 -91800993 - MTE2b LTR MaLR -11 368 11 7 611 25 51 0 0 chr17 3472597 3472636 -91800015 + AT_rich Low_complexity Low_complexity 1 39 0 7 611 680 237 109 40 chr17 3472681 3472883 -91799768 - ID_B1 SINE B4 -1 223 8 8 611 9222 68 19 1 chr17 3473232 3475067 -91797584 - L1_Mus1 LINE L1 -1 6566 4700 8 611 194 0 0 37 chr17 3475509 3475536 -91797115 + (TCTA)n Simple_repeat Simple_repeat 2 27 0 8 611 629 118 9 0 chr17 3475599 3475709 -91796942 + (TGGA)n Simple_repeat Simple_repeat 1 111 0 8 611 552 251 0 0 chr17 3475725 3475896 -91796755 + (TGGG)n Simple_repeat Simple_repeat 2 172 0 8 611 619 279 7 0 chr17 3477510 3477646 -91795005 - B1F SINE Alu -6 143 7 8 611 234 240 52 96 chr17 3477544 3477659 -91794992 - MT2B LTR ERVL -338 263 154 8 611 213 254 0 0 chr17 3477670 3477741 -91794910 + (TG)n Simple_repeat Simple_repeat 1 71 0 8 611 726 226 165 13 chr17 3477804 3478041 -91794610 - B4A SINE B4 -18 274 2 8 611 742 229 130 5 chr17 3478278 3478462 -91794189 + B3 SINE B2 2 208 -8 8 611 626 279 0 26 chr17 3478667 3478818 -91793833 + ID_B1 SINE B4 69 215 -9 8 611 226 200 60 0 chr17 3478774 3478824 -91793827 + PB1D10 SINE Alu 62 114 -3 8 611 193 186 29 0 chr17 3478826 3478896 -91793755 + (CA)n Simple_repeat Simple_repeat 1 72 0 8 611 479 171 25 0 chr17 3478923 3479081 -91793570 + (CA)n Simple_repeat Simple_repeat 1 162 0 8 611 352 64 0 21 chr17 3479089 3479137 -91793514 + HAL1-3A_ME LINE L1 1976 2022 -836 8 611 725 267 115 16 chr17 3479152 3479544 -91793107 - L1MB3 LINE L1 -284 5899 5473 8 611 377 178 11 24 chr17 3480533 3480615 -91792036 + B1_Mus2 SINE Alu 64 148 -2 8 611 343 218 7 7 chr17 3480700 3480744 -91791907 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 611 3572 35 28 12 chr17 3480744 3481173 -91791478 - RLTR10C LTR ERVK 0 436 1 8 611 343 218 7 7 chr17 3481173 3481276 -91791375 + (CA)n Simple_repeat Simple_repeat 1 104 0 8 611 556 287 28 51 chr17 3481437 3481613 -91791038 - B4A SINE B4 -117 175 4 8 611 410 0 20 0 chr17 3484140 3484190 -91788461 + (TG)n Simple_repeat Simple_repeat 2 52 0 8 611 412 288 120 55 chr17 3485307 3485318 -91787333 - CYRA11_Mm Unknown Y-chromosome -220 397 323 8 611 927 186 27 53 chr17 3485318 3485505 -91787146 + URR1B DNA MER1_type 1 182 -43 8 611 412 288 120 55 chr17 3485505 3485524 -91787127 - CYRA11_Mm Unknown Y-chromosome -220 322 167 8 611 1079 124 126 30 chr17 3486945 3487144 -91785507 - URR1A DNA MER1_type -4 222 5 8 611 256 215 59 71 chr17 3487233 3487318 -91785333 - Charlie4z DNA MER1_type -34 133 50 8 611 798 310 36 40 chr17 3487564 3487816 -91784835 - B4A SINE B4 -14 278 28 8 611 228 125 25 0 chr17 3488292 3488332 -91784319 + RLTR9C LTR ERVK 47 87 -306 8 611 989 149 11 47 chr17 3489054 3489244 -91783407 - B2_Mm2 SINE B2 -11 184 2 8 611 576 216 0 168 chr17 3489337 3489420 -91783231 + B4A SINE B4 153 217 -75 8 611 5233 62 18 11 chr17 3489420 3490078 -91782573 + L1_Mus1 LINE L1 5905 6567 0 8 611 576 216 0 168 chr17 3490078 3490155 -91782496 + B4A SINE B4 218 286 -6 8 611 1179 76 0 0 chr17 3490814 3490959 -91781692 + B1_Mus2 SINE Alu 1 145 -2 8 611 256 169 34 0 chr17 3490961 3491020 -91781631 + A-rich Low_complexity Low_complexity 4 64 0 8 611 189 74 0 0 chr17 3491050 3491077 -91781574 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 611 724 240 82 68 chr17 3492378 3492597 -91780054 - ID_B1 SINE B4 -2 222 1 8 611 300 154 0 0 chr17 3493636 3493688 -91778963 + (TA)n Simple_repeat Simple_repeat 2 53 0 8 611 387 0 0 0 chr17 3494527 3494570 -91778081 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 611 531 0 0 0 chr17 3494570 3494628 -91778023 + (GA)n Simple_repeat Simple_repeat 2 60 0 8 611 439 316 60 49 chr17 3495074 3495257 -91777394 - B4A SINE B4 -98 194 10 8 611 198 0 0 0 chr17 3495303 3495325 -91777326 + (TA)n Simple_repeat Simple_repeat 2 23 0 8 611 440 264 0 0 chr17 3496136 3496227 -91776424 + MER58A DNA MER1_type 2 92 -132 8 611 624 239 168 11 chr17 3496568 3496758 -91775893 - ID_B1 SINE B4 0 224 5 8 611 211 333 41 10 chr17 3497617 3497714 -91774937 - L2 LINE L2 -1657 1762 1663 8 611 40 21 0 0 chr17 3498924 3498971 -91773680 + AT_rich Low_complexity Low_complexity 1 47 0 8 611 271 350 20 20 chr17 3498971 3499073 -91773578 - PB1D10 SINE Alu -9 108 7 8 611 294 298 48 0 chr17 3500697 3500801 -91771850 + PB1D9 SINE Alu 5 113 -7 1 611 336 277 114 8 chr17 3500814 3500945 -91771706 + B1F1 SINE Alu 5 149 0 2 611 847 229 14 38 chr17 3501291 3501504 -91771147 - ID_B1 SINE B4 -15 209 2 3 611 225 0 0 0 chr17 3502191 3502216 -91770435 + (TGG)n Simple_repeat Simple_repeat 3 27 0 4 611 822 242 72 0 chr17 3503870 3504064 -91768587 + ID_B1 SINE B4 4 211 -13 5 611 243 88 0 0 chr17 3504086 3504120 -91768531 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 6 611 214 216 157 0 chr17 3505085 3505136 -91767515 + B1_Mus2 SINE Alu 39 97 -50 7 611 547 208 38 0 chr17 3505949 3506055 -91766596 - B1_Mur1 SINE Alu -33 116 7 8 611 308 279 12 0 chr17 3506068 3506154 -91766497 + RMER30 DNA MER1_type 109 195 -7 9 611 1120 95 0 0 chr17 3506192 3506339 -91766312 - B1_Mus1 SINE Alu 0 148 2 1 611 419 225 0 0 chr17 3507384 3507464 -91765187 + URR1B DNA MER1_type 1 80 -145 1 611 192 97 0 0 chr17 3508017 3508048 -91764603 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1 611 231 222 0 0 chr17 3508412 3508466 -91764185 + A-rich Low_complexity Low_complexity 1 54 0 1 611 181 57 57 0 chr17 3508469 3508504 -91764147 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 1 611 278 286 14 0 chr17 3509750 3509820 -91762831 - B1_Mur3 SINE Alu -78 71 1 1 611 4131 50 0 4 chr17 3511699 3512200 -91760451 + L1Md_F2 LINE L1 6084 6582 0 1 611 216 0 0 0 chr17 3512240 3512264 -91760387 + (T)n Simple_repeat Simple_repeat 1 24 0 1 611 388 269 50 8 chr17 3512450 3512570 -91760081 + B1F SINE Alu 23 147 -2 1 611 715 292 35 18 chr17 3513941 3514223 -91758428 - L1_Rod LINE L1 -1 5846 5560 1 611 238 288 91 55 chr17 3514867 3515087 -91757564 - ORR1E LTR MaLR -53 306 79 2 611 227 274 16 0 chr17 3515642 3515704 -91756947 + B1F SINE Alu 31 93 -56 2 611 556 282 15 44 chr17 3516114 3516318 -91756333 + B3A SINE B2 1 198 0 2 611 279 286 0 109 chr17 3517109 3517219 -91755432 - ID4_ SINE ID -47 105 8 2 611 544 239 146 11 chr17 3517760 3517938 -91754713 + ID_B1 SINE B4 5 206 -18 2 611 1422 71 27 0 chr17 3520205 3520389 -91752262 - B2_Mm2 SINE B2 -4 191 3 2 611 1536 48 0 26 chr17 3521833 3522026 -91750625 - B2_Mm1a SINE B2 -4 189 2 2 611 1564 204 99 3 chr17 3524736 3525080 -91747571 - Lx9 LINE L1 -934 6710 6334 2 611 2984 245 43 57 chr17 3525085 3526008 -91746643 + Lx9 LINE L1 6713 7622 -22 2 611 2340 105 3 6 chr17 3527260 3527587 -91745064 - ORR1A2 LTR MaLR 0 327 2 2 611 180 111 0 0 chr17 3528612 3528639 -91744012 + (CACCAT)n Simple_repeat Simple_repeat 5 31 0 2 611 1049 98 7 0 chr17 3528641 3528784 -91743867 - B1_Mur4 SINE Alu -6 144 1 3 611 274 247 0 0 chr17 3528836 3528917 -91743734 + Lx6 LINE L1 7321 7401 -59 3 611 740 108 17 0 chr17 3529471 3529591 -91743060 + (GGGAGA)n Simple_repeat Simple_repeat 5 126 0 3 611 189 0 0 0 chr17 3530246 3530267 -91742384 + (TTTC)n Simple_repeat Simple_repeat 1 21 0 3 611 247 175 24 36 chr17 3530851 3530866 -91741785 + A-rich Low_complexity Low_complexity 5 19 0 3 611 1093 84 0 0 chr17 3530866 3531009 -91741642 + B1_Mus2 SINE Alu 2 144 -3 3 611 247 175 24 36 chr17 3531009 3531076 -91741575 + A-rich Low_complexity Low_complexity 20 86 0 3 611 21 0 0 0 chr17 3533313 3533334 -91739317 + AT_rich Low_complexity Low_complexity 1 21 0 3 611 365 289 116 11 chr17 3534959 3535148 -91737503 + MER20 DNA MER1_type 5 213 -6 3 611 393 22 0 0 chr17 3535246 3535292 -91737359 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 611 254 291 131 23 chr17 3535714 3535844 -91736807 + RSINE1 SINE B4 2 145 -20 4 611 24 0 0 0 chr17 3536289 3536313 -91736338 + AT_rich Low_complexity Low_complexity 1 24 0 4 611 1155 62 0 0 chr17 3536821 3536966 -91735685 + B1_Mus1 SINE Alu 3 147 -1 4 611 362 242 105 0 chr17 3538563 3538658 -91733993 + B3 SINE B2 102 206 -10 4 76 261 305 2 2 chr17 3538921 3538987 -91733664 - B1F SINE Alu -59 68 3 4 612 1114 36 50 0 chr17 3541566 3541706 -91730945 + B1_Mm SINE Alu 1 147 0 4 612 1971 106 3 59 chr17 3541731 3542020 -91730631 + ORR1A2 LTR MaLR 6 285 -42 4 612 1136 82 0 0 chr17 3542020 3542167 -91730484 + B1_Mus1 SINE Alu 2 148 0 4 612 1971 106 3 59 chr17 3542167 3542218 -91730433 + ORR1A2 LTR MaLR 286 327 0 4 612 257 348 28 14 chr17 3542230 3542373 -91730278 + L1M5 LINE L1 5459 5603 -637 4 612 7129 40 2 2 chr17 3543617 3544465 -91728186 + L1_Mus1 LINE L1 5720 6567 0 4 612 528 282 28 0 chr17 3545178 3545320 -91727331 + B1F SINE Alu 3 148 -1 5 612 351 0 0 0 chr17 3545491 3545530 -91727121 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 612 351 0 0 0 chr17 3548146 3548185 -91724466 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 612 21 57 0 0 chr17 3550190 3550225 -91722426 + AT_rich Low_complexity Low_complexity 1 35 0 5 612 269 271 186 32 chr17 3550233 3550610 -91722041 + L1MD LINE L1 2883 3317 -2829 5 612 3248 48 5 5 chr17 3550627 3551023 -91721628 - MTA_Mm LTR MaLR 0 396 1 5 612 564 116 0 0 chr17 3551146 3551232 -91721419 + (GAAAA)n Simple_repeat Simple_repeat 2 87 0 5 612 1060 82 7 0 chr17 3552206 3552352 -91720299 + B1_Mus2 SINE Alu 1 147 0 5 612 198 227 0 22 chr17 3552352 3552386 -91720265 - L2a LINE L2 -17 3409 3376 5 612 720 287 46 32 chr17 3556410 3556626 -91716025 + ID_B1 SINE B4 3 221 -3 5 612 318 290 5 10 chr17 3557286 3557389 -91715262 - B1F2 SINE Alu -19 101 1 6 612 429 366 97 7 chr17 3558105 3558394 -91714257 + MER57D LTR ERV1 41 355 -56 6 612 180 309 92 31 chr17 3558819 3558949 -91713702 - MIRb SINE MIR -32 236 99 6 612 189 0 0 0 chr17 3559197 3559218 -91713433 + (A)n Simple_repeat Simple_repeat 1 21 0 6 612 504 204 161 116 chr17 3562005 3562160 -91710491 - RSINE1 SINE B4 0 165 4 6 612 1815 139 213 15 chr17 3563597 3563926 -91708725 + ORR1B1 LTR MaLR 1 394 0 6 612 217 118 19 19 chr17 3564462 3564514 -91708137 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 612 247 157 44 78 chr17 3564579 3564669 -91707982 + RLTR40 LTR ERVK 570 656 -161 6 612 474 228 0 0 chr17 3564670 3564828 -91707823 + (CA)n Simple_repeat Simple_repeat 1 158 0 6 612 1043 258 17 25 chr17 3564839 3565174 -91707477 - L1MA4A LINE L1 -377 5926 5598 6 612 325 317 83 30 chr17 3565184 3565353 -91707298 + MLT1D LTR MaLR 113 290 -215 7 612 2232 181 21 60 chr17 3565364 3565800 -91706851 + MTC LTR MaLR 3 421 0 7 612 633 293 5 40 chr17 3565816 3566015 -91706636 + MLT1D LTR MaLR 306 497 -8 7 612 4832 118 57 45 chr17 3566126 3566923 -91705728 - RLTR13D1 LTR ERVK 0 806 1 7 612 242 311 23 33 chr17 3567779 3567883 -91704768 + Tigger16a DNA Tigger 765 868 -65 7 612 2100 128 93 0 chr17 3568038 3568391 -91704260 - ORR1B1 LTR MaLR -8 386 1 7 612 475 229 83 28 chr17 3568966 3569146 -91703505 - Arthur1 DNA Tip100 -24 3923 3734 7 612 230 117 24 83 chr17 3569168 3569252 -91703399 + (TTATA)n Simple_repeat Simple_repeat 5 83 0 7 612 1360 20 0 0 chr17 3569381 3569528 -91703123 - B1_Mm SINE Alu 0 147 1 7 612 391 282 72 18 chr17 3569531 3569697 -91702954 - Arthur1 DNA Tip100 -893 3054 2880 7 612 353 367 47 6 chr17 3569763 3569933 -91702718 - Arthur1 DNA Tip100 -3766 181 5 7 612 244 217 28 28 chr17 3570256 3570327 -91702324 + G-rich Low_complexity Low_complexity 2 72 0 7 612 257 309 0 0 chr17 3571642 3571729 -91700922 - L1_Rod LINE L1 -412 5888 5802 7 612 342 370 80 27 chr17 3571760 3571910 -91700741 - RSINE1 SINE B4 -2 163 6 8 612 1014 308 72 39 chr17 3571922 3572775 -91699876 - L1_Rod LINE L1 -525 5775 4805 7 612 186 167 0 0 chr17 3572821 3572857 -91699794 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 8 612 1049 85 23 0 chr17 3573119 3573295 -91699356 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 8 612 941 105 22 0 chr17 3573308 3573537 -91699114 + (TCTA)n Simple_repeat Simple_repeat 1 233 0 8 612 908 113 23 0 chr17 3573558 3573779 -91698872 + (TCTA)n Simple_repeat Simple_repeat 1 225 0 8 612 206 62 31 0 chr17 3573799 3573831 -91698820 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 8 612 225 154 0 0 chr17 3574152 3574191 -91698460 + (CAT)n Simple_repeat Simple_repeat 3 41 0 8 612 566 188 0 0 chr17 3574192 3574288 -91698363 - B1_Mur1 SINE Alu -13 136 41 8 612 273 287 159 14 chr17 3574600 3574745 -91697906 - MIRc SINE MIR -6 262 97 8 612 357 131 0 0 chr17 3574982 3575043 -91697608 + (TTCA)n Simple_repeat Simple_repeat 1 61 0 8 612 223 254 34 0 chr17 3575054 3575113 -91697538 - B1_Mur4 SINE Alu -48 102 42 8 612 423 0 0 0 chr17 3575300 3575347 -91697304 + (CCA)n Simple_repeat Simple_repeat 1 47 0 8 612 234 285 100 71 chr17 3575721 3575861 -91696790 - MIRb SINE MIR -29 239 96 8 612 1272 138 22 35 chr17 3576327 3576559 -91696092 - RLTR11A2 LTR ERVK 0 527 299 9 612 1189 267 51 31 chr17 3576706 3577062 -91695589 - MTE2b LTR MaLR 0 379 17 9 612 225 301 92 55 chr17 3577122 3577231 -91695420 + MIR SINE MIR 65 177 -85 9 612 952 240 36 45 chr17 3577247 3577757 -91694894 - Zaphod2 DNA Tip100 -2789 735 408 9 612 551 312 42 61 chr17 3578077 3578289 -91694362 - MER58A DNA MER1_type 0 224 17 9 612 286 341 71 35 chr17 3578383 3578638 -91694013 - Zaphod2 DNA Tip100 -3225 299 36 9 612 21 36 0 0 chr17 3578702 3578730 -91693921 + AT_rich Low_complexity Low_complexity 1 28 0 9 612 1140 81 0 0 chr17 3578794 3578930 -91693721 + B1_Mus1 SINE Alu 2 137 -11 9 612 300 20 0 58 chr17 3579358 3579410 -91693241 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 9 612 329 294 66 0 chr17 3579486 3579622 -91693029 + B1F SINE Alu 5 149 0 9 612 446 174 8 40 chr17 3579820 3579946 -91692705 + CT-rich Low_complexity Low_complexity 2 123 0 9 612 549 110 0 0 chr17 3579938 3580020 -91692631 + (TTTC)n Simple_repeat Simple_repeat 1 82 0 1 612 865 186 0 7 chr17 3580020 3580166 -91692485 - B1_Mur1 SINE Alu 0 149 5 1 612 454 299 28 85 chr17 3580623 3580835 -91691816 - MER58A DNA MER1_type 0 224 25 1 612 321 319 62 0 chr17 3581146 3581259 -91691392 - PB1 SINE Alu -7 120 1 1 612 237 306 59 39 chr17 3581259 3581301 -91691350 - ID SINE ID -143 81 38 1 612 284 270 90 0 chr17 3582739 3582828 -91689823 + MIRc SINE MIR 132 228 -40 1 612 300 324 19 0 chr17 3582887 3582992 -91689659 - Tigger15a DNA TcMar -607 108 2 1 612 3698 23 2 0 chr17 3584600 3584995 -91687656 + MTA_Mm LTR MaLR 1 396 0 1 612 1289 48 0 0 chr17 3585218 3585364 -91687287 - B1_Mm SINE Alu 0 147 2 1 612 213 196 0 0 chr17 3585693 3585739 -91686912 + (CCCTG)n Simple_repeat Simple_repeat 2 47 0 1 612 21 0 0 0 chr17 3585760 3585781 -91686870 + AT_rich Low_complexity Low_complexity 1 21 0 1 612 1177 93 58 0 chr17 3585781 3585953 -91686698 - B2_Mm2 SINE B2 -5 190 9 1 612 291 161 0 0 chr17 3586038 3586094 -91686557 + (TTTA)n Simple_repeat Simple_repeat 4 59 0 1 612 1142 239 13 69 chr17 3587201 3587429 -91685222 + B4 SINE B4 1 219 -73 1 612 306 0 0 0 chr17 3587429 3587463 -91685188 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 1 612 1142 239 13 69 chr17 3587463 3587539 -91685112 + B4 SINE B4 220 288 -4 1 612 21 0 0 0 chr17 3588301 3588322 -91684329 + AT_rich Low_complexity Low_complexity 1 21 0 1 612 252 200 0 18 chr17 3588869 3588925 -91683726 + (TATG)n Simple_repeat Simple_repeat 3 57 0 1 612 656 222 0 6 chr17 3588925 3589106 -91683545 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 612 529 220 0 28 chr17 3589129 3589311 -91683340 + (TATG)n Simple_repeat Simple_repeat 4 180 0 1 612 232 245 0 0 chr17 3589311 3589360 -91683291 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 612 234 156 0 0 chr17 3590105 3590150 -91682501 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 612 234 128 0 0 chr17 3590245 3590284 -91682367 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 612 209 200 0 0 chr17 3590746 3590786 -91681865 + CT-rich Low_complexity Low_complexity 4 43 0 1 612 717 203 0 0 chr17 3590939 3591116 -91681535 + (CACCC)n Simple_repeat Simple_repeat 4 180 0 1 612 796 138 111 35 chr17 3591607 3591779 -91680872 - RMER6B LTR ERVK -276 185 1 1 612 438 162 9 19 chr17 3592226 3592272 -91680379 + polypurine Low_complexity Low_complexity 3 49 0 1 612 2459 115 156 19 chr17 3592272 3592696 -91679955 - RLTR45 LTR ERVK 0 482 1 1 612 438 162 9 19 chr17 3592696 3592740 -91679911 + polypurine Low_complexity Low_complexity 50 92 0 1 612 1242 100 0 0 chr17 3592740 3592920 -91679731 + (GGA)n Simple_repeat Simple_repeat 1 180 0 1 612 438 162 9 19 chr17 3592920 3592935 -91679716 + polypurine Low_complexity Low_complexity 93 107 0 1 612 819 125 70 0 chr17 3593681 3593809 -91678842 - B1_Mur4 SINE Alu 0 150 14 1 612 347 351 121 12 chr17 3594852 3595025 -91677626 - ORR1E LTR MaLR -167 192 1 1 612 444 306 15 15 chr17 3595039 3595175 -91677476 + Tigger5 DNA MER2_type 38 173 -2233 1 612 601 132 48 10 chr17 3595455 3595670 -91676981 + CT-rich Low_complexity Low_complexity 1 223 0 1 612 1193 82 6 0 chr17 3595685 3595856 -91676795 + (TTCC)n Simple_repeat Simple_repeat 3 174 0 1 612 186 315 19 0 chr17 3599048 3599102 -91673549 + L2a LINE L2 3368 3422 -4 1 612 631 132 33 0 chr17 3599230 3599351 -91673300 + (TATG)n Simple_repeat Simple_repeat 2 126 0 1 612 321 140 0 0 chr17 3599681 3599738 -91672913 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 612 351 333 27 59 chr17 3600170 3600390 -91672261 - CR1_Mam LINE CR1 -501 1703 1491 1 612 25 0 0 0 chr17 3600663 3600688 -91671963 + AT_rich Low_complexity Low_complexity 1 25 0 1 612 923 239 60 0 chr17 3600691 3600892 -91671759 - B3 SINE B2 -3 213 1 1 612 237 287 7 157 chr17 3601188 3601341 -91671310 - CR1_Mam LINE CR1 -1279 925 796 1 612 201 167 0 0 chr17 3602034 3602070 -91670581 + T-rich Low_complexity Low_complexity 1 36 0 1 612 1043 207 34 10 chr17 3602084 3602289 -91670362 - B3 SINE B2 -6 210 1 1 612 244 330 73 68 chr17 3602309 3602501 -91670150 - MER58B DNA MER1_type -19 322 130 1 612 1048 274 70 20 chr17 3602504 3602831 -91669820 + ORR1E LTR MaLR 4 354 -25 1 612 301 257 257 0 chr17 3602838 3602943 -91669708 - MER58B DNA MER1_type -207 134 3 1 612 471 245 29 10 chr17 3603981 3604084 -91668567 + B3 SINE B2 2 106 -110 1 612 521 302 36 7 chr17 3604222 3604362 -91668289 + B4 SINE B4 13 156 -136 1 612 414 299 158 26 chr17 3604435 3604722 -91667929 + MLT1A1 LTR MaLR 4 329 -36 1 612 492 291 165 48 chr17 3604782 3604970 -91667681 - B4 SINE B4 0 292 83 1 612 300 382 53 13 chr17 3605186 3605337 -91667314 - B4A SINE B4 -133 159 3 1 612 197 355 24 37 chr17 3605373 3605455 -91667196 - L2 LINE L2 -3286 133 53 1 612 227 254 16 0 chr17 3605736 3605810 -91666841 + CT-rich Low_complexity Low_complexity 1 75 0 1 612 734 291 59 5 chr17 3605996 3606200 -91666451 - B3 SINE B2 -1 215 1 1 612 685 286 34 26 chr17 3606712 3606981 -91665670 + L1MB3 LINE L1 5897 6167 -16 1 612 1077 131 0 0 chr17 3607285 3607461 -91665190 + (TCC)n Simple_repeat Simple_repeat 3 178 0 1 612 301 288 165 59 chr17 3607797 3607953 -91664698 - LTR79 LTR ERVL 0 527 354 1 612 1223 81 0 0 chr17 3607953 3608101 -91664550 - B1_Mus1 SINE Alu 0 148 1 1 612 301 288 165 59 chr17 3608101 3608180 -91664471 - LTR79 LTR ERVL -174 353 267 1 612 226 0 59 0 chr17 3608182 3608216 -91664435 + (TTC)n Simple_repeat Simple_repeat 1 36 0 1 612 1262 74 6 0 chr17 3608217 3608392 -91664259 + (TTCTCC)n Simple_repeat Simple_repeat 4 179 0 1 612 1372 148 69 0 chr17 3608415 3608632 -91664019 - Lx4A LINE L1 0 7058 6827 1 612 261 0 0 0 chr17 3608835 3608864 -91663787 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 612 207 278 27 14 chr17 3609030 3609103 -91663548 - MIRb SINE MIR -5 263 190 1 612 1496 99 0 5 chr17 3609392 3609585 -91663066 - B2_Mm2 SINE B2 -2 193 2 1 612 207 0 0 0 chr17 3609759 3609782 -91662869 + (T)n Simple_repeat Simple_repeat 1 23 0 1 612 991 231 49 18 chr17 3610077 3610302 -91662349 - B4A SINE B4 -60 232 1 1 612 243 0 0 0 chr17 3610857 3610884 -91661767 + (T)n Simple_repeat Simple_repeat 1 27 0 1 612 24 0 0 0 chr17 3611332 3611356 -91661295 + AT_rich Low_complexity Low_complexity 1 24 0 1 612 1114 133 151 49 chr17 3612424 3612629 -91660022 - URR1A DNA MER1_type 0 226 1 1 612 183 80 0 0 chr17 3612893 3612918 -91659733 + (TTTTC)n Simple_repeat Simple_repeat 4 28 0 1 612 977 278 20 84 chr17 3612939 3613193 -91659458 - L1MA7 LINE L1 -1 6290 6052 1 612 401 0 20 0 chr17 3613193 3613242 -91659409 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 1 612 977 278 20 84 chr17 3613242 3613497 -91659154 - L1MA7 LINE L1 -240 6051 5814 1 612 310 280 37 126 chr17 3613527 3613662 -91658989 - B4 SINE B4 -169 123 1 1 612 499 264 269 62 chr17 3613816 3614136 -91658515 + MTD LTR MaLR 24 409 -12 1 612 754 280 106 28 chr17 3614143 3614852 -91657799 - L1MA7 LINE L1 -573 5727 4951 1 612 224 185 0 18 chr17 3614917 3614972 -91657679 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 612 855 258 123 124 chr17 3614994 3615367 -91657284 - L1MA7 LINE L1 -2458 3685 3289 1 612 737 265 75 0 chr17 3615367 3615400 -91657251 - B3 SINE B2 0 216 183 1 612 189 0 0 0 chr17 3615400 3615421 -91657230 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 612 737 265 75 0 chr17 3615421 3615587 -91657064 - B3 SINE B2 -34 182 3 1 612 855 258 123 124 chr17 3615587 3615938 -91656713 - L1MA7 LINE L1 -2855 3288 2957 1 612 471 35 0 0 chr17 3615938 3615995 -91656656 + (TCCC)n Simple_repeat Simple_repeat 4 60 0 1 612 855 258 123 124 chr17 3615995 3616237 -91656414 - L1MA7 LINE L1 -3187 2956 2719 1 612 27 49 0 0 chr17 3616243 3616284 -91656367 + AT_rich Low_complexity Low_complexity 1 41 0 1 612 2289 139 68 16 chr17 3616365 3616745 -91655906 + RLTR9D LTR ERVK 1 400 -3 1 612 448 344 87 5 chr17 3616979 3617175 -91655476 + MER58C DNA MER1_type 3 214 -1 1 612 226 293 133 0 chr17 3617238 3617313 -91655338 - L1MD2 LINE L1 -1507 5037 4953 1 612 402 312 13 105 chr17 3617477 3617781 -91654870 - MLT1D LTR MaLR -228 277 2 1 612 321 346 52 21 chr17 3617928 3618219 -91654432 - L1MD2 LINE L1 -5404 1143 824 1 612 467 326 92 63 chr17 3618290 3618637 -91654014 + ORR1E LTR MaLR 3 359 0 1 612 1007 287 11 7 chr17 3618650 3618920 -91653731 + B4A SINE B4 3 273 -19 1 612 459 0 0 0 chr17 3618953 3619004 -91653647 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 612 17547 96 8 12 chr17 3619161 3622445 -91650206 - L1_Mus1 LINE L1 0 6567 3304 1 612 3668 181 46 28 chr17 3622446 3623916 -91648735 - L1_Mus1 LINE L1 -4115 1768 263 1 612 2211 108 9 6 chr17 3624188 3624506 -91648145 - ORR1A2 LTR MaLR -8 319 1 1 612 432 165 22 33 chr17 3624510 3624692 -91647959 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 612 259 320 36 55 chr17 3625025 3625190 -91647461 + MER46C DNA MER2_type 19 180 -158 1 612 337 379 55 17 chr17 3625531 3625767 -91646884 + HAL1b LINE L1 994 1238 -771 1 612 33580 68 5 1 chr17 3625768 3631023 -91641628 + L1Md_F2 LINE L1 307 5586 -297 1 612 8875 35 1 2 chr17 3631023 3632020 -91640631 + L1Md_F2 LINE L1 5587 6582 0 1 612 1275 227 29 63 chr17 3632020 3632105 -91640546 + L1MD LINE L1 5616 5684 -558 1 612 393 268 142 32 chr17 3632325 3632528 -91640123 + B4A SINE B4 1 234 -58 1 612 283 154 15 15 chr17 3633048 3633114 -91639537 + CT-rich Low_complexity Low_complexity 3 68 0 1 612 818 81 8 0 chr17 3633795 3633919 -91638732 + (TCTA)n Simple_repeat Simple_repeat 2 126 0 1 612 304 163 23 0 chr17 3634677 3634763 -91637888 + GA-rich Low_complexity Low_complexity 2 89 0 1 612 628 268 66 37 chr17 3634951 3635195 -91637456 + MER58B DNA MER1_type 76 326 -15 1 612 1350 238 111 9 chr17 3638962 3639306 -91633345 + MTEa LTR MaLR 1 379 0 1 612 702 198 11 6 chr17 3639562 3639740 -91632911 + GA-rich Low_complexity Low_complexity 2 180 0 1 612 966 277 7 94 chr17 3642750 3643049 -91629602 + B4 SINE B4 2 274 -18 1 612 315 0 0 0 chr17 3644285 3644320 -91628331 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 612 477 0 0 0 chr17 3644320 3644372 -91628279 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 612 303 324 222 21 chr17 3644655 3645033 -91627618 + L2 LINE L2 2600 3053 -366 2 612 2368 110 3 51 chr17 3645472 3645808 -91626843 + ORR1A3 LTR MaLR 5 324 -2 2 612 369 301 57 29 chr17 3645811 3646020 -91626631 - MIR SINE MIR -44 218 4 2 612 333 0 0 0 chr17 3646424 3646461 -91626190 + (GA)n Simple_repeat Simple_repeat 1 37 0 2 612 664 273 100 13 chr17 3647122 3647352 -91625299 - MER2 DNA MER2_type -94 251 2 2 612 387 0 0 0 chr17 3649057 3649100 -91623551 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 612 462 36 0 0 chr17 3649100 3649155 -91623496 + (GA)n Simple_repeat Simple_repeat 1 56 0 2 612 369 0 0 0 chr17 3650747 3650788 -91621863 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2 612 852 63 0 0 chr17 3651059 3651170 -91621481 + (TC)n Simple_repeat Simple_repeat 1 111 0 2 612 1107 154 94 0 chr17 3651435 3651636 -91621015 + URR1A DNA MER1_type 1 220 -6 2 612 398 268 93 53 chr17 3651636 3651659 -91620992 - CYRA11_Mm Unknown Y-chromosome -230 386 154 2 612 285 197 0 0 chr17 3651864 3651925 -91620726 + (CAGA)n Simple_repeat Simple_repeat 2 62 0 2 612 336 271 251 15 chr17 3651926 3651939 -91620712 - L2a LINE L2 -79 3347 3335 2 612 960 128 0 0 chr17 3651939 3652118 -91620533 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 612 336 271 251 15 chr17 3652118 3652299 -91620352 - L2a LINE L2 -92 3334 3107 2 612 584 261 129 2 chr17 3652307 3652523 -91620128 - MTD LTR MaLR 0 419 180 2 612 3074 215 30 83 chr17 3652530 3653113 -91619538 + Lx6 LINE L1 6144 6723 -737 2 612 1182 89 7 0 chr17 3653113 3653259 -91619392 + B1_Mus2 SINE Alu 1 147 0 2 612 3074 215 30 83 chr17 3653259 3653304 -91619347 + Lx6 LINE L1 6724 6733 -727 2 612 375 23 0 0 chr17 3653304 3653348 -91619303 + (CCAA)n Simple_repeat Simple_repeat 4 47 0 2 612 3074 215 30 83 chr17 3653348 3653511 -91619140 + Lx6 LINE L1 6734 6893 -567 2 612 507 167 0 0 chr17 3653521 3653635 -91619016 + GA-rich Low_complexity Low_complexity 2 115 0 2 612 742 171 8 23 chr17 3653636 3653768 -91618883 + Lx7 LINE L1 6894 7023 -673 2 612 603 0 0 0 chr17 3653807 3653874 -91618777 + (TTTTA)n Simple_repeat Simple_repeat 4 70 0 2 612 592 194 87 5 chr17 3653874 3654009 -91618642 + Lx7 LINE L1 7545 7668 -28 2 612 426 20 0 0 chr17 3654026 3654077 -91618574 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 612 213 65 0 0 chr17 3654077 3654107 -91618544 + (CAGAGA)n Simple_repeat Simple_repeat 4 34 0 2 612 1012 300 92 105 chr17 3654126 3654934 -91617717 - MTC-int LTR MaLR -319 1261 77 2 612 180 0 0 0 chr17 3655040 3655060 -91617591 + (T)n Simple_repeat Simple_repeat 1 20 0 2 612 192 125 0 0 chr17 3655958 3655990 -91616661 + (A)n Simple_repeat Simple_repeat 1 32 0 2 612 25 0 0 0 chr17 3657079 3657104 -91615547 + AT_rich Low_complexity Low_complexity 1 25 0 2 612 495 0 0 0 chr17 3657415 3657470 -91615181 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 612 416 183 24 35 chr17 3657499 3657584 -91615067 + PB1D9 SINE Alu 37 120 0 2 612 267 31 0 0 chr17 3657726 3657758 -91614893 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2 612 189 107 0 0 chr17 3659082 3659110 -91613541 + (CCA)n Simple_repeat Simple_repeat 2 29 0 2 612 300 237 78 13 chr17 3659142 3659219 -91613432 - RSINE1 SINE B4 0 165 84 2 612 246 95 167 0 chr17 3659257 3659299 -91613352 + RMER13B LTR ERVK 1 49 -859 2 612 2333 194 108 28 chr17 3659421 3659929 -91612722 + RMER13B LTR ERVK 360 908 0 2 612 371 361 36 72 chr17 3659942 3660109 -91612542 - B4A SINE B4 -129 163 3 2 612 669 245 7 47 chr17 3660289 3660439 -91612212 + B1F SINE Alu 1 144 -5 2 612 273 196 0 0 chr17 3660448 3660504 -91612147 + GA-rich Low_complexity Low_complexity 3 58 0 2 612 468 0 0 0 chr17 3660909 3660961 -91611690 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 612 515 326 14 7 chr17 3661636 3661778 -91610873 + RSINE1 SINE B4 2 144 -21 2 612 858 111 0 62 chr17 3662163 3662355 -91610296 + CT-rich Low_complexity Low_complexity 1 180 0 2 612 360 133 0 0 chr17 3662356 3662416 -91610235 + (TCC)n Simple_repeat Simple_repeat 3 62 0 2 612 394 318 155 7 chr17 3662594 3662749 -91609902 + B4A SINE B4 1 178 -114 2 612 834 30 0 0 chr17 3662964 3663065 -91609586 + (GA)n Simple_repeat Simple_repeat 1 101 0 2 612 327 261 0 0 chr17 3663246 3663311 -91609340 + MTD LTR MaLR 1 65 -294 2 612 832 284 73 79 chr17 3663688 3664043 -91608608 + ORR1E LTR MaLR 1 353 -6 2 612 1006 106 45 0 chr17 3664045 3664177 -91608474 + B1_Mus1 SINE Alu 1 138 -10 2 612 1269 207 248 0 chr17 3664418 3664732 -91607919 + MTD LTR MaLR 20 411 -8 2 612 608 263 170 40 chr17 3664998 3665275 -91607376 + LTR48 LTR ERV1 469 781 -6 2 612 828 320 62 14 chr17 3666125 3666401 -91606250 + B4A SINE B4 2 290 -2 2 612 216 0 0 0 chr17 3666404 3666428 -91606223 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 612 193 361 94 31 chr17 3666972 3667132 -91605519 + L2c LINE L2 2994 3163 -224 2 612 392 340 33 70 chr17 3667344 3667644 -91605007 + MamRep434 DNA TcMar 133 421 -5 2 612 21 36 0 0 chr17 3667894 3667922 -91604729 + AT_rich Low_complexity Low_complexity 1 28 0 2 612 912 230 26 4 chr17 3667943 3668174 -91604477 - Lx5 LINE L1 0 7050 6815 2 612 603 92 0 0 chr17 3668173 3668260 -91604391 + L1_Mur2 LINE L1 4451 4537 -1340 2 612 238 333 0 0 chr17 3668628 3668706 -91603945 + (TG)n Simple_repeat Simple_repeat 1 78 0 2 612 28 48 0 0 chr17 3668965 3669007 -91603644 + AT_rich Low_complexity Low_complexity 1 42 0 2 613 1135 89 0 0 chr17 3670976 3671122 -91601529 - B1_Mus2 SINE Alu 0 147 2 2 613 199 258 8 8 chr17 3671844 3671973 -91600678 + GA-rich Low_complexity Low_complexity 2 130 0 2 613 258 333 83 28 chr17 3672690 3672868 -91599783 - MIRb SINE MIR -73 195 3 2 613 2962 78 80 33 chr17 3673241 3673692 -91598959 - L1Md_F2 LINE L1 0 6582 6111 2 613 604 317 134 0 chr17 3674667 3674869 -91597782 - B4 SINE B4 -52 240 12 2 613 3427 35 0 0 chr17 3674869 3675265 -91597386 + MTA_Mm LTR MaLR 1 396 0 2 613 8874 37 8 12 chr17 3675265 3675654 -91596997 + MTA_Mm-int LTR MaLR 1 391 -707 2 613 1232 28 7 0 chr17 3675654 3675798 -91596853 + B1_Mus2 SINE Alu 1 145 -2 2 613 207 0 0 0 chr17 3675798 3675821 -91596830 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 613 8874 37 8 12 chr17 3675821 3676532 -91596119 + MTA_Mm-int LTR MaLR 392 1097 -1 2 613 3464 30 0 0 chr17 3676532 3676928 -91595723 + MTA_Mm LTR MaLR 1 396 0 2 613 241 24 23 47 chr17 3677774 3677817 -91594834 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 2 613 755 237 79 42 chr17 3678818 3679034 -91593617 - ID_B1 SINE B4 0 224 1 2 613 423 0 0 0 chr17 3679847 3679894 -91592757 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 613 21 36 0 0 chr17 3681035 3681063 -91591588 + AT_rich Low_complexity Low_complexity 1 28 0 2 613 2675 270 73 68 chr17 3681429 3682269 -91590382 + L1_Rod LINE L1 4264 5073 -774 2 613 324 0 0 0 chr17 3682269 3682305 -91590346 + (CAAAA)n Simple_repeat Simple_repeat 4 39 0 2 613 2675 270 73 68 chr17 3682305 3682853 -91589798 + L1_Rod LINE L1 5074 5659 -188 2 613 312 344 119 34 chr17 3683896 3684284 -91588367 + MamRep434 DNA TcMar 1 421 -5 2 613 1228 176 233 14 chr17 3686306 3686594 -91586057 + MTC LTR MaLR 53 403 -18 2 613 374 69 0 17 chr17 3686610 3686669 -91585982 + (TATAA)n Simple_repeat Simple_repeat 4 61 0 2 613 260 111 22 0 chr17 3686875 3686920 -91585731 + (TATG)n Simple_repeat Simple_repeat 2 47 0 2 613 396 276 156 89 chr17 3687492 3687698 -91584953 + B4 SINE B4 1 202 -90 2 613 282 29 0 0 chr17 3687698 3687733 -91584918 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 2 613 396 276 156 89 chr17 3687733 3687796 -91584855 + B4 SINE B4 203 287 -5 2 613 263 259 98 15 chr17 3687919 3688052 -91584599 - Lx6 LINE L1 -27 7433 7290 2 613 1433 138 4 0 chr17 3688070 3688302 -91584349 + L1_Mur2 LINE L1 4055 4287 -1590 2 613 3093 58 5 10 chr17 3688826 3689224 -91583427 + MTA_Mm LTR MaLR 1 396 0 2 613 212 237 85 102 chr17 3689596 3689722 -91582929 + MIR SINE MIR 100 226 -42 2 613 1009 200 100 0 chr17 3691658 3691858 -91580793 - URR1A DNA MER1_type -1 225 6 2 613 243 88 0 0 chr17 3694850 3694884 -91577767 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 613 609 283 75 75 chr17 3694942 3695209 -91577442 - B4A SINE B4 -23 269 3 2 613 351 176 0 0 chr17 3696638 3696729 -91575922 + A-rich Low_complexity Low_complexity 1 91 0 2 613 590 236 6 0 chr17 3696875 3697040 -91575611 + (TG)n Simple_repeat Simple_repeat 2 167 0 2 613 1099 221 5 0 chr17 3697228 3697436 -91575215 + B3 SINE B2 1 209 -7 2 613 504 48 0 0 chr17 3698211 3698274 -91574377 + (TC)n Simple_repeat Simple_repeat 2 64 0 2 613 531 301 41 35 chr17 3698937 3699106 -91573545 + B3A SINE B2 1 170 -28 2 613 423 0 0 0 chr17 3699137 3699184 -91573467 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 613 256 326 76 102 chr17 3699515 3699819 -91572832 + ORR1E LTR MaLR 4 299 -60 2 613 579 270 208 0 chr17 3700702 3700880 -91571771 - ID_B1 SINE B4 -8 216 2 2 613 252 143 0 0 chr17 3701341 3701383 -91571268 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 613 663 161 0 0 chr17 3702616 3702796 -91569855 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 613 456 19 0 0 chr17 3702807 3702860 -91569791 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 613 324 0 0 0 chr17 3703405 3703441 -91569210 + (T)n Simple_repeat Simple_repeat 1 36 0 2 613 233 205 25 13 chr17 3704290 3704369 -91568282 + (TA)n Simple_repeat Simple_repeat 1 80 0 2 613 25 0 0 0 chr17 3704977 3705002 -91567649 + AT_rich Low_complexity Low_complexity 1 25 0 2 613 366 143 0 0 chr17 3705367 3705430 -91567221 + (CTCA)n Simple_repeat Simple_repeat 4 66 0 2 613 293 220 24 35 chr17 3705430 3705568 -91567083 + (CCCA)n Simple_repeat Simple_repeat 1 136 0 3 613 231 278 0 0 chr17 3705568 3705744 -91566907 + (CA)n Simple_repeat Simple_repeat 1 176 0 3 613 452 293 38 17 chr17 3705745 3706037 -91566614 + (CCCA)n Simple_repeat Simple_repeat 1 298 0 3 613 307 287 58 22 chr17 3706095 3706193 -91566458 + (CCCA)n Simple_repeat Simple_repeat 4 105 0 3 613 231 88 0 0 chr17 3706193 3706227 -91566424 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 613 307 287 58 22 chr17 3706227 3706267 -91566384 + (CCCA)n Simple_repeat Simple_repeat 2 43 0 3 613 384 224 45 77 chr17 3706602 3706757 -91565894 + RLTR15 LTR ERVK 33 182 -177 3 613 396 135 0 0 chr17 3707512 3707586 -91565065 + (TG)n Simple_repeat Simple_repeat 1 74 0 3 613 1494 204 0 40 chr17 3707760 3708113 -91564538 - Lx7 LINE L1 0 7696 7358 3 613 23 33 0 0 chr17 3708132 3708162 -91564489 + AT_rich Low_complexity Low_complexity 1 30 0 3 613 217 155 17 17 chr17 3708272 3708331 -91564320 + CT-rich Low_complexity Low_complexity 2 60 0 3 613 475 262 77 39 chr17 3708346 3708501 -91564150 - RSINE1 SINE B4 -2 163 3 3 613 1456 158 152 8 chr17 3709168 3709668 -91562983 + ORR1A2-int LTR MaLR 1 572 -1391 3 613 702 214 6 107 chr17 3709619 3709797 -91562854 + MT2B LTR ERVL 128 287 -314 3 613 439 272 67 120 chr17 3709797 3709818 -91562833 + RLTR25A LTR ERVK 516 657 -446 3 613 482 92 0 0 chr17 3709817 3709882 -91562769 + ORR1A2-int LTR MaLR 1899 1963 0 3 613 2393 98 6 0 chr17 3709882 3710207 -91562444 + ORR1A2 LTR MaLR 1 327 0 3 613 238 256 0 0 chr17 3710320 3710398 -91562253 + T-rich Low_complexity Low_complexity 1 78 0 3 613 366 23 0 0 chr17 3710433 3710476 -91562175 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 613 367 282 90 67 chr17 3711821 3712133 -91560518 + L1MC5 LINE L1 7461 7779 -182 3 613 207 220 0 0 chr17 3713647 3713697 -91558954 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 613 3486 157 25 30 chr17 3713911 3714556 -91558095 - Lx4B LINE L1 -6 7052 6411 3 613 38 22 0 0 chr17 3714614 3714659 -91557992 + AT_rich Low_complexity Low_complexity 1 45 0 3 613 186 43 0 0 chr17 3714709 3714732 -91557919 + (TA)n Simple_repeat Simple_repeat 2 24 0 3 613 607 313 67 57 chr17 3714842 3715035 -91557616 - B3A SINE B2 -3 195 1 3 613 3015 118 82 2 chr17 3715525 3716010 -91556641 - Lx LINE L1 -2 6652 6129 3 613 235 314 81 0 chr17 3716583 3716669 -91555982 - MTEa LTR MaLR 0 379 287 3 613 3563 50 70 0 chr17 3717113 3717557 -91555094 - MT2C_Mm LTR ERVL 0 475 1 3 613 321 89 0 0 chr17 3718092 3718137 -91554514 + (TTTTC)n Simple_repeat Simple_repeat 1 45 0 3 613 276 30 0 0 chr17 3718162 3718195 -91554456 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 3 613 243 61 0 0 chr17 3718489 3718522 -91554129 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 613 344 356 61 29 chr17 3719528 3719774 -91552877 + MER34A1 LTR ERV1 140 393 -194 3 613 387 0 0 0 chr17 3719790 3719833 -91552818 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 613 391 340 108 25 chr17 3719866 3720107 -91552544 - B4 SINE B4 -12 280 20 3 613 573 243 13 7 chr17 3720122 3720271 -91552380 + MER34A1 LTR ERV1 368 517 -70 3 613 182 290 87 0 chr17 3721505 3721574 -91551077 - MIRb SINE MIR -27 241 167 3 613 3457 25 2 0 chr17 3721702 3722097 -91550554 + MTA_Mm LTR MaLR 1 396 0 3 613 218 328 131 20 chr17 3722565 3722623 -91550028 + MIRb SINE MIR 27 101 -167 3 613 871 293 48 28 chr17 3722623 3722981 -91549670 + MLT1A0 LTR MaLR 1 365 0 3 613 218 328 131 20 chr17 3722981 3723121 -91549530 + MIRb SINE MIR 102 247 -21 3 613 207 246 52 17 chr17 3723245 3723303 -91549348 + L2b LINE L2 3313 3372 -3 3 613 2673 110 172 19 chr17 3723422 3723905 -91548746 + RLTR31B_Mm LTR ERVK 1 557 0 3 613 708 286 6 6 chr17 3724114 3724276 -91548375 + B3A SINE B2 1 162 -36 3 613 1233 188 9 27 chr17 3724279 3724503 -91548148 + URR1B DNA MER1_type 1 220 -5 3 613 580 135 18 0 chr17 3724608 3724719 -91547932 + CT-rich Low_complexity Low_complexity 1 113 0 3 613 1099 217 42 63 chr17 3724720 3725054 -91547597 - RLTR15 LTR ERVK 0 359 33 3 613 984 315 78 12 chr17 3726682 3727003 -91545648 + MER44B DNA MER2_type 6 347 -203 3 613 1487 193 72 28 chr17 3728526 3728846 -91543805 + ORR1D1 LTR MaLR 1 334 -40 3 613 24 53 0 0 chr17 3729960 3729998 -91542653 + AT_rich Low_complexity Low_complexity 1 38 0 3 613 305 301 73 53 chr17 3730608 3730759 -91541892 + MIR SINE MIR 108 261 -1 3 613 3433 65 0 0 chr17 3730820 3731253 -91541398 + L1_Mus1 LINE L1 6133 6565 -2 3 613 195 366 0 3 chr17 3731460 3731549 -91541102 + MIRm SINE MIR 83 170 -38 3 613 2131 161 34 0 chr17 3731832 3732187 -91540464 + ORR1B2 LTR MaLR 1 367 0 3 613 239 295 36 45 chr17 3732294 3732404 -91540247 + PB1D10 SINE Alu 9 117 0 3 613 429 20 0 0 chr17 3732949 3732999 -91539652 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 613 227 203 0 17 chr17 3733786 3733846 -91538805 + GA-rich Low_complexity Low_complexity 1 59 0 3 613 285 173 30 38 chr17 3734039 3734171 -91538480 + (TA)n Simple_repeat Simple_repeat 2 132 0 3 613 1754 144 102 67 chr17 3734646 3735019 -91537632 - ORR1B1 LTR MaLR -8 386 1 3 613 554 336 75 72 chr17 3735227 3735576 -91537075 + ORR1E LTR MaLR 7 356 -3 3 613 221 256 70 93 chr17 3735657 3735672 -91536979 - ID SINE ID -138 86 3 3 613 230 284 70 56 chr17 3735672 3735743 -91536908 - ID4 SINE ID -9 74 3 3 613 990 277 20 0 chr17 3736144 3736447 -91536204 - L1MA5 LINE L1 -6 6294 5986 3 613 657 56 0 0 chr17 3738140 3738230 -91534421 + (GA)n Simple_repeat Simple_repeat 1 90 0 3 613 721 299 122 18 chr17 3738629 3738904 -91533747 + MLT1B LTR MaLR 67 371 -19 3 613 918 126 240 6 chr17 3738904 3739087 -91533564 + URR1A DNA MER1_type 1 226 0 3 613 252 355 9 53 chr17 3739625 3739738 -91532913 + MER58B DNA MER1_type 226 333 -8 3 613 793 102 16 0 chr17 3739864 3739991 -91532660 - L1Md_F2 LINE L1 -12 6570 6442 3 613 402 253 0 21 chr17 3740077 3740170 -91532481 + PB1D10 SINE Alu 22 112 -5 3 613 226 299 104 0 chr17 3740180 3740247 -91532404 + ID4_ SINE ID 2 75 -8 3 613 680 248 148 32 chr17 3740262 3740629 -91532022 + L1MB2 LINE L1 5472 5900 -271 3 613 529 314 83 36 chr17 3741596 3741933 -91530718 + MER54A LTR ERVL 62 414 -487 3 613 30 0 0 0 chr17 3742513 3742543 -91530108 + AT_rich Low_complexity Low_complexity 1 30 0 3 613 434 301 7 52 chr17 3742554 3742708 -91529943 - RSINE1 SINE B4 -17 148 2 3 613 788 289 130 70 chr17 3743652 3744243 -91528408 - MLT1E2 LTR MaLR 0 624 1 3 613 228 304 0 0 chr17 3744493 3744549 -91528102 + CT-rich Low_complexity Low_complexity 4 59 0 3 613 760 263 17 11 chr17 3744888 3745069 -91527582 - LTR40a LTR ERVL 0 519 338 3 613 333 263 126 58 chr17 3745209 3745444 -91527207 + MTEa LTR MaLR 139 379 0 3 613 746 228 46 12 chr17 3745501 3745674 -91526977 - B3A SINE B2 -18 180 2 3 613 307 325 41 24 chr17 3745806 3745929 -91526722 - LTR40a LTR ERVL -391 128 4 3 613 3841 150 30 46 chr17 3745958 3747183 -91525468 - Lx4B LINE L1 -816 6242 5062 3 613 1916 186 163 13 chr17 3747183 3747771 -91524880 + Lx4B LINE L1 6113 6847 -153 3 613 23 33 0 0 chr17 3747781 3747811 -91524840 + AT_rich Low_complexity Low_complexity 1 30 0 3 613 614 216 41 1 chr17 3747847 3747993 -91524658 + Lx8 LINE L1 6953 7115 -358 3 613 785 264 54 50 chr17 3748419 3748678 -91523973 - RMER13A LTR ERVK -506 354 95 3 613 1033 237 5 5 chr17 3748865 3749081 -91523570 - B3 SINE B2 0 216 1 3 613 264 277 29 10 chr17 3749615 3749717 -91522934 - MER103 DNA DNA 0 166 63 3 613 203 175 25 0 chr17 3749757 3749797 -91522854 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 613 325 312 0 31 chr17 3750434 3750530 -91522121 + ID_B1 SINE B4 88 180 -44 3 613 771 306 0 12 chr17 3750666 3750838 -91521813 + B3A SINE B2 1 170 -28 3 613 31 21 0 20 chr17 3750886 3750898 -91521753 + AT_rich Low_complexity Low_complexity 1 12 0 3 613 5321 94 16 4 chr17 3750898 3751631 -91521020 + Lx3A LINE L1 6233 6974 -7 3 613 31 21 0 20 chr17 3751631 3751667 -91520984 + AT_rich Low_complexity Low_complexity 1 36 0 3 613 384 252 69 30 chr17 3752113 3752244 -91520407 - MTEa LTR MaLR -14 365 230 3 613 277 239 35 35 chr17 3752403 3752516 -91520135 - L1MC LINE L1 -1130 5016 4904 3 613 235 275 14 55 chr17 3752664 3752737 -91519914 - ID4_ SINE ID -12 71 2 3 613 437 242 0 15 chr17 3753000 3753134 -91519517 + GA-rich Low_complexity Low_complexity 2 133 0 3 613 2360 158 42 5 chr17 3753375 3753428 -91519223 - MTC LTR MaLR 0 421 356 3 613 534 31 0 0 chr17 3753428 3753492 -91519159 + (TC)n Simple_repeat Simple_repeat 2 65 0 3 613 2360 158 42 5 chr17 3753492 3753844 -91518807 - MTC LTR MaLR -66 355 1 3 613 262 308 132 0 chr17 3753917 3754008 -91518643 - B4 SINE B4 -81 211 109 3 613 323 306 10 0 chr17 3754010 3754108 -91518543 - L1MEc LINE L1 -3605 2714 2616 3 613 2689 206 5 42 chr17 3754255 3754852 -91517799 + Lx6 LINE L1 6320 6894 -566 3 613 307 223 19 0 chr17 3754855 3754958 -91517693 + (CAGA)n Simple_repeat Simple_repeat 2 106 0 3 613 1515 247 13 16 chr17 3754960 3755334 -91517317 + Lx6 LINE L1 6948 7283 -177 3 613 309 297 20 10 chr17 3755430 3755532 -91517119 + Lx7 LINE L1 7193 7295 -401 3 613 846 139 0 0 chr17 3755549 3755700 -91516951 + (TG)n Simple_repeat Simple_repeat 1 151 0 3 613 369 250 53 46 chr17 3755920 3755974 -91516677 - L1MEc LINE L1 -3998 2402 2342 3 613 632 293 15 5 chr17 3755974 3756173 -91516478 + RMER30 DNA MER1_type 1 201 -1 3 613 369 250 53 46 chr17 3756173 3756269 -91516382 - L1MEc LINE L1 -4059 2341 2251 3 613 374 39 19 0 chr17 3757126 3757178 -91515473 + (TG)n Simple_repeat Simple_repeat 1 53 0 4 613 789 196 7 26 chr17 3757181 3757333 -91515318 - B3A SINE B2 -47 151 3 4 613 282 320 54 62 chr17 3759129 3759259 -91513392 + Tigger12A DNA MER2_type 52 180 -611 4 613 1022 287 108 19 chr17 3759265 3759634 -91513017 + MTD LTR MaLR 3 404 -15 4 613 1156 68 7 0 chr17 3761358 3761505 -91511146 + B1_Mus1 SINE Alu 1 148 0 4 613 220 228 70 0 chr17 3761646 3761703 -91510948 - MIRm SINE MIR -122 154 94 4 613 6978 234 53 13 chr17 3761785 3762459 -91510192 - Lx6 LINE L1 -4 7456 6741 4 613 180 0 0 0 chr17 3762459 3762479 -91510172 + (TTA)n Simple_repeat Simple_repeat 2 21 0 4 613 10091 180 34 16 chr17 3762479 3765287 -91507364 - Lx6 LINE L1 -720 6740 3893 4 613 1497 133 39 11 chr17 3765293 3765575 -91507076 - Lx6 LINE L1 -4020 1860 1571 4 613 523 212 28 41 chr17 3765579 3765846 -91506805 - Lx6 LINE L1 -4485 1395 1130 4 613 228 100 0 0 chr17 3765942 3765982 -91506669 + (T)n Simple_repeat Simple_repeat 1 40 0 4 613 387 0 0 0 chr17 3766053 3766096 -91506555 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 613 580 315 13 27 chr17 3768198 3768348 -91504303 - B1_Mur1 SINE Alu -1 148 1 4 613 420 289 78 93 chr17 3768564 3768949 -91503702 + MTEb LTR MaLR 1 379 0 4 613 262 188 0 0 chr17 3769099 3769168 -91503483 - MT2A LTR ERVL 0 533 465 4 613 373 291 29 66 chr17 3769190 3769326 -91503325 - MTEb LTR MaLR -248 131 1 4 613 231 36 0 0 chr17 3769328 3769356 -91503295 + (TA)n Simple_repeat Simple_repeat 1 28 0 4 613 300 91 0 0 chr17 3769356 3769400 -91503251 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 613 351 0 0 0 chr17 3769406 3769445 -91503206 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 613 1568 288 35 29 chr17 3769475 3769926 -91502725 - MT2A LTR ERVL -79 454 1 4 613 467 342 54 23 chr17 3770101 3770487 -91502164 - L1MD1 LINE L1 -111 6522 6125 4 613 669 226 0 0 chr17 3770513 3770637 -91502014 + RSINE1 SINE B4 4 127 -38 4 613 458 276 92 0 chr17 3770791 3770976 -91501675 - L1MD1 LINE L1 -1076 5461 5260 4 613 336 310 178 31 chr17 3771008 3771140 -91501511 - L1MD1 LINE L1 -2170 4367 4237 4 613 1316 83 6 0 chr17 3771140 3771357 -91501294 - L1_Mus1 LINE L1 0 6567 6381 4 613 336 310 178 31 chr17 3771357 3771966 -91500685 - L1MD1 LINE L1 -2301 4236 3517 4 613 252 26 0 0 chr17 3772076 3772114 -91500537 - L1_Mus2 LINE L1 0 6566 6529 4 613 6783 76 23 1 chr17 3772114 3773631 -91499020 + L1_Mus1 LINE L1 5019 6567 0 4 613 317 228 145 35 chr17 3773680 3773880 -91498771 - L1MD1 LINE L1 -3992 2641 2420 4 613 449 97 14 0 chr17 3773917 3773989 -91498662 + (TG)n Simple_repeat Simple_repeat 2 74 0 4 613 363 33 32 16 chr17 3774076 3774138 -91498513 + (TTTTTG)n Simple_repeat Simple_repeat 2 64 0 4 613 814 110 28 49 chr17 3774142 3774285 -91498366 - B1_Mur4 SINE Alu 0 150 11 4 613 214 188 41 20 chr17 3774452 3774501 -91498150 + CT-rich Low_complexity Low_complexity 1 50 0 4 613 1455 0 0 32 chr17 3774501 3774687 -91497964 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 4 613 453 36 0 0 chr17 3774687 3774742 -91497909 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 4 613 253 333 0 25 chr17 3774745 3774825 -91497826 - B4A SINE B4 -214 78 1 4 613 191 88 29 0 chr17 3774961 3774995 -91497656 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 613 619 277 22 7 chr17 3774996 3775134 -91497517 - B3A SINE B2 -46 152 13 4 613 300 356 9 46 chr17 3775776 3775885 -91496766 - L1MD1 LINE L1 -5845 695 591 4 613 202 264 118 65 chr17 3776722 3776815 -91495836 + L2c LINE L2 3283 3380 -7 4 613 457 308 121 42 chr17 3776891 3777081 -91495570 - L3b LINE CR1 -29 453 249 4 613 254 355 46 71 chr17 3777499 3777696 -91494955 + MLT1H LTR MaLR 198 389 -160 4 613 804 105 0 0 chr17 3778253 3778396 -91494255 + (CA)n Simple_repeat Simple_repeat 2 144 0 4 613 324 0 0 0 chr17 3778396 3778431 -91494220 + (GA)n Simple_repeat Simple_repeat 2 37 0 4 613 1734 228 62 18 chr17 3778483 3778884 -91493767 + MTD LTR MaLR 1 419 0 4 613 375 263 135 26 chr17 3778884 3779040 -91493611 + MTD-int LTR MaLR 15 187 -1071 4 613 568 291 174 31 chr17 3779161 3779448 -91493203 + MLT1A0 LTR MaLR 13 340 -25 4 613 363 78 0 0 chr17 3779739 3779790 -91492861 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 613 3155 27 0 0 chr17 3779810 3780179 -91492472 - L1Md_T LINE L1 0 6582 6214 4 613 1385 234 112 56 chr17 3780355 3780954 -91491697 - RMER13A LTR ERVK -261 647 1 4 613 279 244 0 0 chr17 3780954 3780999 -91491652 - RSINE1 SINE B4 -116 49 5 4 613 26 0 0 0 chr17 3781004 3781030 -91491621 + AT_rich Low_complexity Low_complexity 1 26 0 4 613 910 189 7 0 chr17 3781341 3781494 -91491157 + B3A SINE B2 1 154 -44 4 613 309 300 10 20 chr17 3781573 3781675 -91490976 + MTEa LTR MaLR 279 379 0 4 613 189 74 0 0 chr17 3781783 3781810 -91490841 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 613 270 0 0 0 chr17 3782062 3782092 -91490559 + (T)n Simple_repeat Simple_repeat 1 30 0 4 613 336 24 0 0 chr17 3783403 3783444 -91489207 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 613 201 74 0 0 chr17 3783446 3783473 -91489178 + (GA)n Simple_repeat Simple_repeat 1 27 0 4 613 30557 83 10 5 chr17 3783731 3788902 -91483749 + L1Md_F2 LINE L1 392 5586 -297 4 613 7361 75 17 2 chr17 3788902 3789913 -91482738 + L1Md_F2 LINE L1 5587 6582 0 4 613 1130 235 31 14 chr17 3790604 3790897 -91481754 - Lx2B LINE L1 -2 6998 6701 4 613 21 57 0 0 chr17 3790987 3791022 -91481629 + AT_rich Low_complexity Low_complexity 1 35 0 4 613 228 220 34 0 chr17 3791103 3791162 -91481489 + L1MB1 LINE L1 5887 5947 -221 4 613 1332 194 109 52 chr17 3791883 3792230 -91480421 + ORR1D1 LTR MaLR 1 367 -7 4 613 372 321 55 40 chr17 3792251 3792452 -91480199 + MER3 DNA MER1_type 1 204 -5 4 613 480 18 0 0 chr17 3792633 3792690 -91479961 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 613 25 31 0 0 chr17 3792709 3792741 -91479910 + AT_rich Low_complexity Low_complexity 1 32 0 4 613 240 143 0 0 chr17 3793185 3793227 -91479424 + (TC)n Simple_repeat Simple_repeat 2 43 0 4 613 705 310 81 60 chr17 3793273 3793558 -91479093 - B4A SINE B4 0 292 2 4 613 22 35 0 0 chr17 3793735 3793764 -91478887 + AT_rich Low_complexity Low_complexity 1 29 0 4 613 425 133 0 13 chr17 3793910 3793986 -91478665 + (TA)n Simple_repeat Simple_repeat 1 75 0 4 613 22 0 0 0 chr17 3794104 3794126 -91478525 + AT_rich Low_complexity Low_complexity 1 22 0 4 613 392 334 170 31 chr17 3795086 3795469 -91477182 + L1MEg LINE L1 4 439 -5680 4 613 253 320 52 0 chr17 3795491 3795588 -91477063 + L1MEg LINE L1 486 587 -5532 4 613 2577 200 5 40 chr17 3796222 3796820 -91475831 - Lx5 LINE L1 -812 6238 5662 4 613 413 311 140 69 chr17 3796932 3797835 -91474816 + L1MEg LINE L1 924 1906 -4319 4 613 1221 256 113 18 chr17 3797887 3798214 -91474437 - MTD LTR MaLR 0 419 62 4 613 282 319 91 14 chr17 3798596 3798739 -91473912 + RSINE1 SINE B4 4 157 -8 4 613 322 283 82 117 chr17 3798918 3799114 -91473537 - ORR1E LTR MaLR -167 192 4 4 613 7133 76 5 4 chr17 3799355 3800740 -91471911 - L1_Mus1 LINE L1 0 6567 5182 4 76 410 325 52 103 chr17 3801060 3801485 -91471166 - L1MC4 LINE L1 -864 7097 6695 4 614 180 310 8 81 chr17 3801521 3801644 -91471007 + L2 LINE L2 1678 1791 -1628 4 614 276 30 0 0 chr17 3801773 3801806 -91470845 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 4 614 391 335 77 43 chr17 3802313 3802523 -91470128 + L1M5 LINE L1 2933 3156 -2990 4 614 537 58 0 0 chr17 3802523 3802592 -91470059 + (TA)n Simple_repeat Simple_repeat 1 69 0 4 614 391 335 77 43 chr17 3802592 3802730 -91469921 + L1M5 LINE L1 3157 3293 -2853 4 614 28 29 0 0 chr17 3803278 3803313 -91469338 + AT_rich Low_complexity Low_complexity 1 35 0 4 614 551 259 18 48 chr17 3803332 3803498 -91469153 - RSINE1 SINE B4 0 165 5 4 614 602 295 65 50 chr17 3805508 3805708 -91466943 - B4A SINE B4 0 292 90 4 614 662 143 8 0 chr17 3805711 3805830 -91466821 + CT-rich Low_complexity Low_complexity 1 120 0 4 614 180 152 0 0 chr17 3805828 3805861 -91466790 + (CACCAT)n Simple_repeat Simple_repeat 3 35 0 4 614 416 244 0 0 chr17 3805888 3805966 -91466685 - B4 SINE B4 -208 84 7 4 614 386 291 110 0 chr17 3806926 3807053 -91465598 - ID_B1 SINE B4 -1 223 83 4 614 564 283 40 11 chr17 3807672 3807847 -91464804 - RMER5 LTR ERV1 -16 518 339 4 614 1343 115 29 0 chr17 3807849 3808058 -91464593 - Lx LINE L1 -1 6653 6439 4 614 2862 55 26 3 chr17 3808713 3809094 -91463557 + MTA_Mm LTR MaLR 1 390 -6 4 614 4943 76 89 19 chr17 3809094 3809846 -91462805 + MTA_Mm-int LTR MaLR 1 805 -293 4 614 782 267 98 31 chr17 3810495 3810750 -91461901 + B4A SINE B4 1 272 -20 4 614 572 271 89 11 chr17 3810815 3810994 -91461657 + B4 SINE B4 82 274 -18 4 614 201 373 0 0 chr17 3811003 3811078 -91461573 + (CA)n Simple_repeat Simple_repeat 2 76 0 4 614 597 64 0 0 chr17 3811079 3811157 -91461494 + (GA)n Simple_repeat Simple_repeat 2 79 0 4 614 477 0 0 0 chr17 3812101 3812154 -91460497 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 614 404 234 44 26 chr17 3812156 3812270 -91460381 - PB1D7 SINE Alu -4 116 1 4 614 243 0 0 0 chr17 3812271 3812298 -91460353 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 614 1124 85 0 0 chr17 3812303 3812444 -91460207 - B1_Mus2 SINE Alu -6 141 1 4 614 22 0 0 0 chr17 3812467 3812489 -91460162 + AT_rich Low_complexity Low_complexity 1 22 0 4 614 732 306 82 94 chr17 3812830 3813503 -91459148 - LTR41B LTR ERVL -13 745 1 4 614 233 0 0 59 chr17 3814028 3814062 -91458589 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 4 614 999 293 32 0 chr17 3814304 3814553 -91458098 - ORR1D2 LTR MaLR -113 257 1 4 614 508 302 49 0 chr17 3814553 3814715 -91457936 - Lx8 LINE L1 -820 6653 6484 4 614 184 227 0 22 chr17 3814982 3815027 -91457624 - L3 LINE CR1 -2274 2215 2172 4 614 1060 234 72 58 chr17 3815259 3815622 -91457029 + ORR1D2 LTR MaLR 1 368 -2 4 614 388 300 42 14 chr17 3815812 3815954 -91456697 - RSINE1 SINE B4 -17 148 3 4 614 1039 263 106 0 chr17 3815978 3816309 -91456342 - Lx9 LINE L1 -35 7609 7244 4 614 206 326 19 0 chr17 3816779 3816857 -91455794 + L2c LINE L2 3093 3174 -201 4 614 4540 104 54 14 chr17 3816925 3817229 -91455422 - L1_Mus3 LINE L1 -6 6632 6329 5 614 2865 16 0 0 chr17 3817229 3817551 -91455100 - RLTRETN_Mm LTR ERVK 0 322 1 5 614 4540 104 54 14 chr17 3817551 3817950 -91454701 - L1_Mus3 LINE L1 -310 6328 5901 5 614 602 310 87 70 chr17 3819281 3819758 -91452893 + MLT1E3 LTR MaLR 68 585 -39 5 614 256 286 30 30 chr17 3821332 3821433 -91451218 + MLT1N2 LTR MaLR 436 536 -26 5 614 362 299 118 18 chr17 3822353 3822523 -91450128 - B4A SINE B4 -105 187 1 5 614 413 300 30 15 chr17 3822593 3822725 -91449926 - B1_Mur1 SINE Alu -2 147 14 5 614 38662 13 0 7 chr17 3822808 3828962 -91443689 - L1Md_A LINE L1 0 6582 480 5 614 402 404 21 14 chr17 3829454 3829738 -91442913 - B4A SINE B4 -2 290 5 5 614 236 202 86 25 chr17 3829837 3829918 -91442733 - L1M6 LINE L1 -4029 2467 2382 5 614 278 302 86 8 chr17 3831175 3831292 -91441359 - LTR40c LTR ERVL -130 335 210 5 614 381 22 0 0 chr17 3831324 3831370 -91441281 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 614 498 321 204 8 chr17 3831432 3831903 -91440748 - L1M5 LINE L1 -1896 4250 3688 5 614 291 328 87 71 chr17 3832047 3832231 -91440420 - Tigger5 DNA MER2_type -2200 206 20 5 614 640 232 12 43 chr17 3832255 3832417 -91440234 - MLT1A0 LTR MaLR -202 163 7 5 614 363 44 0 0 chr17 3832533 3832578 -91440073 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 614 24 32 0 0 chr17 3833012 3833043 -91439608 + AT_rich Low_complexity Low_complexity 1 31 0 5 614 3822 107 18 9 chr17 3833212 3833776 -91438875 + Lx2 LINE L1 6429 6997 0 5 614 234 235 0 0 chr17 3835017 3835098 -91437553 + CT-rich Low_complexity Low_complexity 2 82 0 5 614 304 257 57 85 chr17 3835106 3835387 -91437264 + RMER17C LTR ERVK 84 356 -54 5 614 260 111 56 0 chr17 3836230 3836302 -91436349 + (TG)n Simple_repeat Simple_repeat 1 76 0 5 614 696 353 4 9 chr17 3836477 3836703 -91435948 - B4A SINE B4 -58 234 10 5 614 1891 150 133 45 chr17 3837475 3837872 -91434779 - RMER19B LTR ERVK -14 888 457 5 614 815 343 30 55 chr17 3837865 3838263 -91434388 - MLT2B4 LTR ERVL -168 388 1 5 614 209 273 0 0 chr17 3838290 3838334 -91434317 + polypurine Low_complexity Low_complexity 2 45 0 5 614 198 258 161 0 chr17 3838647 3838709 -91433942 + MIRm SINE MIR 174 245 -31 5 614 297 314 23 11 chr17 3839393 3839480 -91433171 - MER99 DNA hAT? -743 88 1 5 614 623 271 126 11 chr17 3839615 3839805 -91432846 + MTD LTR MaLR 14 225 -194 5 614 341 136 15 0 chr17 3839805 3839871 -91432780 + G-rich Low_complexity Low_complexity 5 71 0 5 614 255 268 0 0 chr17 3839874 3839945 -91432706 + GA-rich Low_complexity Low_complexity 2 72 0 5 614 420 111 0 0 chr17 3839946 3840009 -91432642 + (GGA)n Simple_repeat Simple_repeat 3 65 0 5 614 702 159 29 7 chr17 3840020 3840159 -91432492 + MTD LTR MaLR 278 419 0 5 614 23 33 0 0 chr17 3840343 3840373 -91432278 + AT_rich Low_complexity Low_complexity 1 30 0 5 614 189 0 0 0 chr17 3840717 3840738 -91431913 + (GGAGA)n Simple_repeat Simple_repeat 3 23 0 5 614 546 274 14 36 chr17 3841619 3841759 -91430892 + B1F2 SINE Alu 3 139 -10 5 614 483 18 0 0 chr17 3841759 3841815 -91430836 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 614 751 181 0 0 chr17 3841993 3842120 -91430531 - B1_Mm SINE Alu 0 147 21 5 614 1089 280 20 84 chr17 3842550 3843147 -91429504 - L1_Rod LINE L1 -16 5831 5273 5 614 31707 70 8 5 chr17 3843729 3848800 -91423851 + L1Md_F3 LINE L1 502 5586 -297 5 614 8287 36 3 5 chr17 3848801 3849798 -91422853 + L1Md_F3 LINE L1 5588 6582 -2 5 614 832 73 15 89 chr17 3850072 3850207 -91422444 - B1_Mus1 SINE Alu 0 148 24 5 614 413 260 61 87 chr17 3850207 3850364 -91422287 - ID_B1 SINE B4 0 222 3 5 614 583 277 111 26 chr17 3850835 3851374 -91421277 - L1ME1 LINE L1 -3 6331 5572 5 614 257 258 91 60 chr17 3851545 3851667 -91420984 + MTEa LTR MaLR 279 365 -14 5 614 444 221 39 0 chr17 3851927 3852031 -91420620 - L1MC1 LINE L1 -1 6332 6225 5 614 450 270 91 43 chr17 3852080 3852289 -91420362 + MLT1A0 LTR MaLR 56 274 -91 5 614 235 241 0 0 chr17 3852326 3852384 -91420267 - L1MC1 LINE L1 -900 5433 5376 5 614 335 335 30 30 chr17 3852456 3852656 -91419995 - L1MEf LINE L1 -2498 3648 3449 5 614 467 299 120 21 chr17 3852719 3852860 -91419791 - L1MEf LINE L1 -2888 3258 3102 5 614 1311 69 0 0 chr17 3852860 3853034 -91419617 - L1_Mus2 LINE L1 0 6566 6393 5 614 467 292 120 23 chr17 3853034 3853184 -91419467 - L1MEf LINE L1 -3043 3103 2936 5 614 5313 39 19 3 chr17 3853249 3853899 -91418752 - L1Md_F3 LINE L1 -14 6570 5911 5 614 10042 84 5 4 chr17 3854072 3856281 -91416370 - L1_Mus1 LINE L1 0 6567 4359 5 614 456 296 77 19 chr17 3856406 3856561 -91416090 - RSINE1 SINE B4 0 165 2 5 614 715 329 128 63 chr17 3856575 3857435 -91415216 - L1MEf LINE L1 -4292 1950 1035 5 614 1512 177 208 76 chr17 3857841 3858312 -91414339 - MT2A LTR ERVL 0 533 1 5 614 339 164 0 0 chr17 3858960 3859021 -91413630 + C-rich Low_complexity Low_complexity 1 61 0 5 614 964 238 11 56 chr17 3859102 3859369 -91413282 + Lx5 LINE L1 6796 7050 0 5 614 609 308 126 16 chr17 3859553 3859863 -91412788 + L2 LINE L2 1977 2320 -1099 5 614 273 200 16 16 chr17 3860396 3860457 -91412194 - ID2 SINE ID -7 76 16 5 614 1123 193 19 14 chr17 3862478 3862693 -91409958 + B3 SINE B2 1 216 0 5 614 261 0 0 0 chr17 3862744 3862773 -91409878 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 614 313 228 6 6 chr17 3863048 3863211 -91409440 + CT-rich Low_complexity Low_complexity 2 164 0 5 614 580 190 0 27 chr17 3863172 3863356 -91409295 + (TCTG)n Simple_repeat Simple_repeat 2 180 0 5 614 229 152 45 0 chr17 3863349 3863415 -91409236 + (TCTCTG)n Simple_repeat Simple_repeat 2 70 0 5 614 190 216 11 22 chr17 3863397 3863487 -91409164 + (TCTG)n Simple_repeat Simple_repeat 2 90 0 5 614 652 307 32 32 chr17 3863499 3863778 -91408873 - B4A SINE B4 -12 280 2 5 614 332 300 50 5 chr17 3864105 3864214 -91408437 + PB1D7 SINE Alu 1 117 -10 5 614 268 320 58 10 chr17 3864322 3864426 -91408225 + ORR1E LTR MaLR 22 130 -229 5 614 432 0 0 0 chr17 3864619 3864667 -91407984 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 614 652 228 13 65 chr17 3864668 3864823 -91407828 - B3A SINE B2 -48 150 4 5 614 283 376 60 38 chr17 3865468 3865653 -91406998 + L3 LINE CR1 3709 3897 -592 5 614 486 0 0 0 chr17 3866281 3866335 -91406316 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 614 1059 58 44 0 chr17 3866608 3866745 -91405906 + B1_Mm SINE Alu 1 143 -4 5 614 597 105 0 0 chr17 3866773 3866868 -91405783 + (CAAG)n Simple_repeat Simple_repeat 1 95 0 5 614 507 285 50 63 chr17 3866981 3867202 -91405449 - MER89 LTR ERV1 -193 366 149 5 614 1402 259 134 27 chr17 3867472 3868024 -91404627 + Lx8 LINE L1 6669 7279 -194 5 614 282 29 0 0 chr17 3868077 3868112 -91404539 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 5 614 443 202 0 0 chr17 3868815 3868894 -91403757 - ID4 SINE ID -3 80 2 5 614 417 20 0 0 chr17 3870398 3870448 -91402203 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 614 687 25 0 0 chr17 3871193 3871274 -91401377 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 5 614 374 306 96 7 chr17 3871298 3871433 -91401218 + MLT1B LTR MaLR 11 157 -233 5 614 879 275 134 8 chr17 3871600 3871838 -91400813 + B4 SINE B4 2 269 -23 5 614 231 299 0 13 chr17 3871856 3871934 -91400717 + (CATATA)n Simple_repeat Simple_repeat 2 78 0 5 614 369 283 76 48 chr17 3872287 3872432 -91400219 + MLT1B LTR MaLR 240 388 -2 5 614 609 319 88 17 chr17 3872525 3872764 -91399887 + MER2 DNA MER2_type 88 343 -2 5 614 644 270 68 29 chr17 3874830 3875036 -91397615 + B4A SINE B4 2 215 -77 5 614 360 158 12 0 chr17 3875249 3875331 -91397320 + Lx LINE L1 6571 6653 -1 5 614 553 242 262 3 chr17 3875433 3875727 -91396924 + ORR1D1 LTR MaLR 1 370 -4 5 614 235 353 23 12 chr17 3876453 3876539 -91396112 - MLT1H2 LTR MaLR -335 154 68 5 614 1856 209 80 3 chr17 3876622 3876996 -91395655 + MTD LTR MaLR 3 405 -14 5 614 210 263 141 25 chr17 3877098 3877224 -91395427 - MIRb SINE MIR -91 177 33 5 614 244 316 26 0 chr17 3877699 3877775 -91394876 + ID4 SINE ID 2 79 -4 5 614 1981 128 65 34 chr17 3877983 3878339 -91394312 - ORR1B2 LTR MaLR 0 367 1 5 614 591 60 0 0 chr17 3878422 3878506 -91394145 + (GA)n Simple_repeat Simple_repeat 1 84 0 5 614 420 306 42 80 chr17 3878806 3878964 -91393687 - RMER15 LTR ERVL -43 532 379 5 614 387 41 0 0 chr17 3878964 3879013 -91393638 + (CACG)n Simple_repeat Simple_repeat 1 49 0 5 614 420 306 42 80 chr17 3879013 3879092 -91393559 - RMER15 LTR ERVL -197 378 304 5 614 395 327 66 69 chr17 3879360 3879695 -91392956 - L1M5 LINE L1 -2881 3265 2932 5 614 405 0 0 0 chr17 3880289 3880334 -91392317 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 614 351 321 0 35 chr17 3880334 3880450 -91392201 - ID_B1 SINE B4 -15 209 98 5 614 499 298 16 31 chr17 3880496 3880624 -91392027 - B4 SINE B4 -119 173 48 5 614 200 245 0 19 chr17 3881155 3881209 -91391442 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 5 614 336 372 70 45 chr17 3881212 3881412 -91391239 - L1M5 LINE L1 -1130 5016 4812 5 614 251 311 9 0 chr17 3881502 3881608 -91391043 - L1MC LINE L1 -1444 4702 4596 5 614 27 29 0 0 chr17 3882285 3882319 -91390332 + AT_rich Low_complexity Low_complexity 1 34 0 5 614 567 0 0 0 chr17 3883155 3883218 -91389433 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 614 496 290 33 61 chr17 3885184 3885364 -91387287 - MTEb LTR MaLR -1 378 204 5 614 289 333 0 31 chr17 3885434 3885530 -91387121 - MTEb LTR MaLR -196 183 91 5 614 257 170 0 21 chr17 3887613 3887661 -91384990 - MLT2C2 LTR ERVL -412 52 6 5 614 226 363 71 36 chr17 3887787 3887927 -91384724 - MamRep605 Unknown Unknown -238 638 494 6 614 507 33 0 0 chr17 3889367 3889428 -91383223 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 614 262 133 0 62 chr17 3889754 3889818 -91382833 + (GGGTG)n Simple_repeat Simple_repeat 3 62 0 6 614 221 230 40 130 chr17 3889859 3889959 -91382692 + L2 LINE L2 2553 2643 -776 6 614 1880 290 40 2 chr17 3890234 3890839 -91381812 + Lx7 LINE L1 6671 7298 -398 6 614 207 182 0 0 chr17 3890924 3890957 -91381694 + polypurine Low_complexity Low_complexity 1 33 0 6 614 917 262 83 11 chr17 3891325 3891591 -91381060 - B4 SINE B4 -6 286 2 6 614 371 292 126 17 chr17 3891602 3891832 -91380819 - L1ME4a LINE L1 -186 5938 5684 6 614 805 157 166 11 chr17 3892406 3892437 -91380214 - B3 SINE B2 0 216 187 6 614 336 64 0 0 chr17 3892437 3892484 -91380167 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 6 614 805 157 166 11 chr17 3892484 3892639 -91380012 - B3 SINE B2 -30 186 1 6 614 735 68 45 0 chr17 3892747 3892879 -91379772 + (TCTA)n Simple_repeat Simple_repeat 1 138 0 6 614 444 243 32 83 chr17 3893788 3893945 -91378706 - Lx7 LINE L1 -982 6714 6566 6 614 255 140 0 0 chr17 3894100 3894150 -91378501 + (GA)n Simple_repeat Simple_repeat 2 51 0 6 614 301 146 78 6 chr17 3894570 3894736 -91377915 + (TA)n Simple_repeat Simple_repeat 2 179 0 6 614 183 80 0 0 chr17 3894816 3894841 -91377810 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 614 438 204 40 61 chr17 3895134 3895233 -91377418 - RSINE1 SINE B4 0 165 69 6 614 23 33 0 0 chr17 3895242 3895272 -91377379 + AT_rich Low_complexity Low_complexity 1 30 0 6 614 386 276 20 0 chr17 3895841 3895939 -91376712 + B1F SINE Alu 2 101 -48 6 614 351 261 0 0 chr17 3895940 3896032 -91376619 - L1MC4a LINE L1 -2023 5859 5768 6 614 387 285 158 10 chr17 3896126 3896328 -91376323 - L1MC4a LINE L1 -2242 5640 5409 6 614 21 0 0 0 chr17 3896632 3896653 -91375998 + AT_rich Low_complexity Low_complexity 1 21 0 6 614 507 82 0 0 chr17 3896655 3896728 -91375923 + (TG)n Simple_repeat Simple_repeat 1 73 0 6 614 249 33 0 0 chr17 3896728 3896757 -91375894 + (GA)n Simple_repeat Simple_repeat 1 30 0 6 614 460 279 2 9 chr17 3896762 3896877 -91375774 - B3A SINE B2 -65 133 20 6 614 259 286 154 32 chr17 3897260 3897383 -91375268 - LTR48B LTR ERV1 -506 138 1 6 614 1239 176 38 5 chr17 3898226 3898437 -91374214 - URR1A DNA MER1_type -8 218 1 6 614 339 254 0 0 chr17 3898475 3898597 -91374054 + (CA)n Simple_repeat Simple_repeat 1 122 0 6 614 276 347 59 33 chr17 3899634 3899971 -91372680 - L1M6 LINE L1 -4541 1955 1610 6 614 300 286 10 58 chr17 3900165 3900269 -91372382 - RMER15 LTR ERVL -153 422 324 6 614 227 143 193 18 chr17 3900706 3900763 -91371888 + MLT1A1 LTR MaLR 268 334 -74 6 614 526 278 45 65 chr17 3900787 3900962 -91371689 + B3A SINE B2 2 178 -20 6 614 486 33 0 0 chr17 3900962 3901022 -91371629 + (CA)n Simple_repeat Simple_repeat 1 60 0 6 614 526 278 45 65 chr17 3901022 3901046 -91371605 + B3A SINE B2 179 197 -1 6 614 189 0 0 0 chr17 3901487 3901508 -91371143 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 6 614 871 146 173 31 chr17 3902176 3902367 -91370284 + URR1B DNA MER1_type 7 224 -1 6 614 362 256 57 86 chr17 3902367 3902422 -91370229 - CYRA11_Mm Unknown Y-chromosome -451 166 118 6 614 757 344 68 3 chr17 3903619 3903940 -91368711 + MLT1A0 LTR MaLR 2 343 -22 6 614 558 79 0 0 chr17 3904017 3904093 -91368558 + (TG)n Simple_repeat Simple_repeat 2 77 0 6 614 1014 107 0 0 chr17 3904678 3904828 -91367823 + (TTTC)n Simple_repeat Simple_repeat 2 151 0 6 614 381 231 44 50 chr17 3904828 3905003 -91367648 - Lx9 LINE L1 -11 7633 7458 6 614 633 146 41 20 chr17 3904994 3905141 -91367510 - Lx9 LINE L1 -128 7516 7367 6 614 24 32 0 0 chr17 3905513 3905544 -91367107 + AT_rich Low_complexity Low_complexity 1 31 0 6 614 670 166 159 0 chr17 3906293 3906444 -91366207 + URR1A DNA MER1_type 52 226 0 6 614 283 400 15 7 chr17 3906634 3906770 -91365881 - MER45A DNA Tip100 -18 160 24 6 614 231 306 40 27 chr17 3906791 3906865 -91365786 + ORR1E LTR MaLR 2 76 -283 6 614 1850 143 102 8 chr17 3906994 3907347 -91365304 + ORR1B1 LTR MaLR 1 386 -8 6 614 253 329 80 54 chr17 3907659 3907898 -91364753 - MLT1B LTR MaLR -69 321 47 6 614 327 248 92 63 chr17 3908388 3908530 -91364121 - MER5A1 DNA MER1_type 0 166 21 6 614 318 296 52 86 chr17 3910464 3910697 -91361954 - ORR1C1 LTR MaLR -88 290 66 6 614 195 42 0 0 chr17 3911497 3911521 -91361130 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6 614 243 122 0 0 chr17 3911662 3911711 -91360940 + (T)n Simple_repeat Simple_repeat 1 49 0 6 614 327 303 0 0 chr17 3912185 3912274 -91360377 + (TG)n Simple_repeat Simple_repeat 2 90 0 6 614 850 294 70 5 chr17 3912285 3912545 -91360106 - B4 SINE B4 0 292 6 6 614 603 286 29 0 chr17 3913050 3913190 -91359461 - B1_Mur1 SINE Alu -5 144 1 6 614 498 75 0 0 chr17 3914890 3914957 -91357694 + (GGA)n Simple_repeat Simple_repeat 3 69 0 6 614 1325 51 6 0 chr17 3915031 3915208 -91357443 - L1_Mus1 LINE L1 -625 5942 5765 6 614 5571 56 3 3 chr17 3915208 3915905 -91356746 + L1_Mus1 LINE L1 5871 6567 0 6 614 321 0 40 20 chr17 3916310 3916360 -91356291 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 6 614 21 0 0 0 chr17 3916631 3916652 -91355999 + AT_rich Low_complexity Low_complexity 1 21 0 6 614 25 51 0 0 chr17 3917091 3917130 -91355521 + AT_rich Low_complexity Low_complexity 1 39 0 6 614 207 243 0 0 chr17 3917207 3917244 -91355407 + polypyrimidine Low_complexity Low_complexity 4 40 0 6 614 422 286 32 13 chr17 3917275 3917431 -91355220 - Lx8 LINE L1 -242 7231 7073 6 614 1493 298 107 13 chr17 3917670 3918363 -91354288 - Lx7 LINE L1 -624 7072 6315 6 614 231 218 0 52 chr17 3918453 3918511 -91354140 - BC1_Mm scRNA scRNA -83 69 15 6 614 253 211 0 19 chr17 3918463 3918516 -91354135 - ID SINE ID -163 61 10 6 614 380 271 42 17 chr17 3918715 3918835 -91353816 + MIRc SINE MIR 11 133 -135 6 614 5280 100 4 16 chr17 3919225 3919978 -91352673 - Lx LINE L1 0 6654 5911 6 614 227 304 0 0 chr17 3920739 3920808 -91351843 + (CA)n Simple_repeat Simple_repeat 2 70 0 6 614 204 345 0 11 chr17 3921296 3921387 -91351264 + (TG)n Simple_repeat Simple_repeat 1 90 0 6 614 411 304 14 22 chr17 3921415 3921553 -91351098 - B4A SINE B4 -22 270 134 6 614 1098 214 107 67 chr17 3922246 3922387 -91350264 - ORR1C2 LTR MaLR 0 384 216 6 614 7758 35 5 1 chr17 3922387 3923329 -91349322 + L1Md_F3 LINE L1 5625 6570 -14 6 614 1098 214 107 67 chr17 3923329 3923543 -91349108 - ORR1C2 LTR MaLR -169 215 15 6 614 4968 69 14 1 chr17 3923543 3924196 -91348455 - L1_Mus2 LINE L1 0 6566 5906 6 614 2018 28 0 0 chr17 3924196 3924443 -91348208 + L1_Mus2 LINE L1 5649 5895 -743 6 614 21 0 0 0 chr17 3924463 3924484 -91348167 + AT_rich Low_complexity Low_complexity 1 21 0 6 614 461 338 36 7 chr17 3924490 3924627 -91348024 + RSINE1 SINE B4 5 145 -20 6 614 423 0 0 0 chr17 3924634 3924681 -91347970 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 614 227 133 0 22 chr17 3924684 3924730 -91347921 + (TAA)n Simple_repeat Simple_repeat 1 45 0 6 614 336 248 0 0 chr17 3925295 3925412 -91347239 + GA-rich Low_complexity Low_complexity 2 118 0 6 614 24 67 0 0 chr17 3926399 3926444 -91346207 + AT_rich Low_complexity Low_complexity 1 45 0 6 614 1123 58 7 0 chr17 3926454 3926591 -91346060 - B1_Mus1 SINE Alu -8 140 3 6 614 302 330 59 11 chr17 3927756 3927980 -91344671 + MIR SINE MIR 34 260 -8 6 614 23 0 0 0 chr17 3930105 3930128 -91342523 + AT_rich Low_complexity Low_complexity 1 23 0 6 614 507 73 0 0 chr17 3931247 3931315 -91341336 + (TA)n Simple_repeat Simple_repeat 2 69 0 6 614 216 361 90 0 chr17 3931929 3932051 -91340600 - MIRb SINE MIR -23 245 113 6 615 285 354 10 0 chr17 3933794 3933893 -91338758 + (TG)n Simple_repeat Simple_repeat 1 100 0 6 615 21 0 0 0 chr17 3933900 3933921 -91338730 + AT_rich Low_complexity Low_complexity 1 21 0 6 615 22 0 0 0 chr17 3934085 3934107 -91338544 + AT_rich Low_complexity Low_complexity 1 22 0 6 615 441 344 64 17 chr17 3934576 3934810 -91337841 + Tigger5 DNA MER2_type 3 247 -2159 6 615 316 286 36 0 chr17 3934834 3934918 -91337733 - MER47B DNA MER2_type -1 417 331 6 615 521 297 110 0 chr17 3935066 3935275 -91337376 + MER2 DNA MER2_type 65 296 -49 6 615 318 313 81 57 chr17 3935268 3935515 -91337136 - MER47B DNA MER2_type -150 268 16 6 615 1241 243 49 116 chr17 3935605 3935992 -91336659 - MTE2a LTR MaLR 0 379 19 6 615 886 206 47 55 chr17 3936428 3936685 -91335966 + MER96B DNA hAT 107 361 -56 6 615 368 245 18 36 chr17 3937990 3938100 -91334551 + MIR SINE MIR 155 262 0 6 615 2426 168 23 0 chr17 3939746 3940145 -91332506 + MTC LTR MaLR 2 409 -12 6 615 596 227 345 9 chr17 3940148 3940357 -91332294 + MTD LTR MaLR 141 419 0 6 615 1470 226 94 22 chr17 3941288 3941659 -91330992 + MTD LTR MaLR 22 419 0 6 615 429 206 0 0 chr17 3943161 3943253 -91329398 + (TA)n Simple_repeat Simple_repeat 1 92 0 6 615 457 337 22 22 chr17 3943263 3943445 -91329206 + B3A SINE B2 1 182 -16 6 615 246 298 105 9 chr17 3944497 3944602 -91328049 - L2a LINE L2 0 3426 3312 6 615 4012 41 2 15 chr17 3947674 3948212 -91324439 - L1_Mus2 LINE L1 -477 6531 5649 6 615 3170 48 2 25 chr17 3948212 3948619 -91324032 + L1_Mus2 LINE L1 6167 6564 -2 6 615 201 39 0 0 chr17 3948689 3948715 -91323936 + (G)n Simple_repeat Simple_repeat 1 26 0 6 615 207 100 0 0 chr17 3949145 3949175 -91323476 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 6 615 324 0 0 0 chr17 3949772 3949808 -91322843 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 7 615 709 101 10 0 chr17 3949882 3949981 -91322670 - B2_Mm2 SINE B2 -92 103 4 7 615 431 301 0 14 chr17 3949981 3950126 -91322525 - B1F2 SINE Alu -2 147 5 7 615 537 16 0 0 chr17 3950189 3950251 -91322400 + (TC)n Simple_repeat Simple_repeat 2 63 0 7 615 683 280 68 50 chr17 3951181 3951459 -91321192 + B4A SINE B4 2 284 -8 7 615 270 258 116 21 chr17 3952127 3952222 -91320429 + MLT1A1 LTR MaLR 305 408 0 7 615 288 303 44 55 chr17 3952733 3952995 -91319656 + ORR1E LTR MaLR 54 361 -18 7 615 21 71 0 0 chr17 3953170 3953212 -91319439 + AT_rich Low_complexity Low_complexity 1 42 0 7 615 268 143 47 47 chr17 3953761 3953930 -91318721 + (TCTA)n Simple_repeat Simple_repeat 1 169 0 7 615 343 141 43 11 chr17 3953954 3954047 -91318604 + CT-rich Low_complexity Low_complexity 1 96 0 7 615 477 0 0 0 chr17 3954606 3954659 -91317992 + (TC)n Simple_repeat Simple_repeat 1 53 0 7 615 2570 43 25 3 chr17 3955294 3955619 -91317032 + L1_Mus1 LINE L1 6236 6567 0 7 615 220 53 0 50 chr17 3956427 3956467 -91316184 + (ATG)n Simple_repeat Simple_repeat 1 38 0 7 615 226 288 58 83 chr17 3956849 3956970 -91315681 - MER92B LTR ERV1 -429 207 90 7 615 345 308 0 0 chr17 3958727 3958834 -91313817 - PB1D9 SINE Alu -12 108 2 7 615 216 0 0 0 chr17 3958923 3958947 -91313704 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 615 229 171 66 0 chr17 3958947 3959023 -91313628 + (TA)n Simple_repeat Simple_repeat 2 82 0 7 615 310 155 36 42 chr17 3959038 3959154 -91313497 + (TA)n Simple_repeat Simple_repeat 2 118 0 7 615 1212 131 0 5 chr17 3959154 3959338 -91313313 + B2_Mm2 SINE B2 1 183 -12 7 615 310 155 36 42 chr17 3959338 3959389 -91313262 + (TA)n Simple_repeat Simple_repeat 2 51 0 7 615 305 284 10 59 chr17 3959518 3959619 -91313032 - B4A SINE B4 -144 148 53 7 615 554 305 0 0 chr17 3960226 3960357 -91312294 - B1F SINE Alu -18 131 1 7 615 220 270 16 0 chr17 3960423 3960486 -91312165 + ID4_ SINE ID 11 74 -9 7 615 305 250 37 12 chr17 3960979 3961060 -91311591 - LTR90B LTR LTR 0 796 714 7 615 303 71 0 0 chr17 3961801 3961843 -91310808 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 615 403 299 39 0 chr17 3962710 3962838 -91309813 + B1F1 SINE Alu 4 143 -6 7 615 275 0 0 28 chr17 3962990 3963026 -91309625 + (TG)n Simple_repeat Simple_repeat 1 35 0 7 615 403 111 0 16 chr17 3963054 3963118 -91309533 - HAL1-3A_ME LINE L1 -823 2035 1973 7 615 293 0 0 26 chr17 3963164 3963202 -91309449 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 615 335 93 18 53 chr17 3963227 3963284 -91309367 - HAL1-3A_ME LINE L1 -831 2027 1973 7 615 347 0 0 23 chr17 3963332 3963376 -91309275 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 615 385 297 55 2 chr17 3963480 3963631 -91309020 - B4A SINE B4 0 292 3 7 615 245 336 95 9 chr17 3964165 3964270 -91308381 - MIRc SINE MIR -85 183 70 7 615 321 329 7 30 chr17 3964420 3964610 -91308041 + CT-rich Low_complexity Low_complexity 1 185 0 7 615 481 246 134 29 chr17 3964636 3964808 -91307843 + B4A SINE B4 8 197 -95 7 615 380 268 109 130 chr17 3965178 3965500 -91307151 - MT2A LTR ERVL -1 532 200 7 615 804 241 31 0 chr17 3966568 3966730 -91305921 + B3A SINE B2 2 168 -30 7 615 414 0 0 0 chr17 3966733 3966779 -91305872 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 615 465 406 42 5 chr17 3967403 3967616 -91305035 - MLT1K LTR MaLR -328 267 47 7 615 424 169 280 119 chr17 3967940 3968108 -91304543 + B3A SINE B2 2 196 -2 7 615 4045 134 52 29 chr17 3968126 3968825 -91303826 - Lx LINE L1 -2 6652 5938 7 615 234 357 59 12 chr17 3968936 3969021 -91303630 - PB1D7 SINE Alu -15 105 17 7 615 309 26 0 0 chr17 3969243 3969281 -91303370 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 615 468 0 0 0 chr17 3969313 3969365 -91303286 + (TC)n Simple_repeat Simple_repeat 1 52 0 7 615 371 283 26 9 chr17 3969366 3969480 -91303171 - B4 SINE B4 -176 116 1 7 615 624 336 82 37 chr17 3970011 3970391 -91302260 + MER90a LTR ERV1 69 465 -149 7 615 25 31 0 0 chr17 3970790 3970822 -91301829 + AT_rich Low_complexity Low_complexity 1 32 0 7 615 1244 27 7 0 chr17 3972644 3972790 -91299861 - B1_Mm SINE Alu 0 147 1 7 615 2737 31 3 0 chr17 3972813 3973138 -91299513 - L1Md_F2 LINE L1 -13 6569 6244 7 615 183 156 0 0 chr17 3973142 3973174 -91299477 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 7 615 1311 87 0 21 chr17 3973179 3973367 -91299284 - B2_Mm2 SINE B2 -9 186 3 7 615 24 53 0 0 chr17 3977395 3977433 -91295218 + AT_rich Low_complexity Low_complexity 1 38 0 7 615 1115 168 113 0 chr17 3977463 3977666 -91294985 + URR1A DNA MER1_type 1 226 0 7 615 253 325 132 19 chr17 3977666 3978021 -91294630 + L1MEc LINE L1 44 441 -5959 7 615 362 289 53 20 chr17 3978646 3978798 -91293853 + L1MEc LINE L1 2216 2372 -4028 7 615 2987 73 0 19 chr17 3978816 3979235 -91293416 - Lx3_Mus LINE L1 -146 5740 5330 7 615 7927 90 36 25 chr17 3979234 3980513 -91292138 + Lx3_Mus LINE L1 5705 6997 -12 7 615 384 301 81 60 chr17 3980615 3980863 -91291788 + L1MEc LINE L1 2334 2586 -3733 7 615 941 323 99 53 chr17 3981102 3981987 -91290664 + L1MEc LINE L1 2874 3797 -2522 7 615 628 234 12 87 chr17 3982053 3982226 -91290425 - B3A SINE B2 0 198 39 7 615 352 297 110 49 chr17 3982346 3982711 -91289940 + L1MD LINE L1 3871 4257 -1889 7 615 311 325 62 12 chr17 3983005 3983167 -91289484 + L1MEc LINE L1 5438 5607 -745 7 615 280 350 29 19 chr17 3983195 3983300 -91289351 + MLT1E2 LTR MaLR 1 106 -548 7 615 281 336 69 15 chr17 3983439 3983569 -91289082 + MLT1E2 LTR MaLR 272 408 -219 7 615 453 214 63 14 chr17 3983573 3983715 -91288936 + Lx4B LINE L1 6910 7058 0 7 615 28 0 0 0 chr17 3985280 3985308 -91287343 + AT_rich Low_complexity Low_complexity 1 28 0 7 615 331 266 9 26 chr17 3985503 3985853 -91286798 + (TG)n Simple_repeat Simple_repeat 1 343 0 7 615 318 50 0 0 chr17 3985853 3985893 -91286758 + (TA)n Simple_repeat Simple_repeat 1 40 0 7 615 726 170 0 0 chr17 3985909 3986080 -91286571 + (TG)n Simple_repeat Simple_repeat 1 171 0 7 615 358 340 93 0 chr17 3986084 3986234 -91286417 - RSINE1 SINE B4 0 165 2 7 615 306 0 0 0 chr17 3987479 3987513 -91285138 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 615 209 255 0 0 chr17 3987726 3987777 -91284874 + CT-rich Low_complexity Low_complexity 3 53 0 7 615 22 0 0 0 chr17 3987933 3987955 -91284696 + AT_rich Low_complexity Low_complexity 1 22 0 7 615 362 162 14 0 chr17 3988766 3988840 -91283811 + CT-rich Low_complexity Low_complexity 1 75 0 7 615 21 57 0 0 chr17 3989209 3989244 -91283407 + AT_rich Low_complexity Low_complexity 1 35 0 7 615 6905 72 26 1 chr17 3990087 3990151 -91282500 - L1Md_F2 LINE L1 -14 6568 6505 7 615 204 40 0 0 chr17 3990151 3990176 -91282475 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 7 615 31838 107 20 8 chr17 3990176 3996559 -91276092 - L1Md_F2 LINE L1 -78 6504 38 7 615 1553 40 15 0 chr17 3997512 3997714 -91274937 - L1_Mus1 LINE L1 -537 6030 5826 7 615 3143 67 94 5 chr17 3997714 3998150 -91274501 + L1_Mus1 LINE L1 6093 6567 0 7 615 26 0 0 0 chr17 3999776 3999802 -91272849 + AT_rich Low_complexity Low_complexity 1 26 0 7 615 253 321 169 24 chr17 4000847 4001013 -91271638 - MER45C DNA Tip100 -1 952 763 1 615 465 232 30 0 chr17 4001026 4001125 -91271526 - ID_B1 SINE B4 -30 194 93 2 615 682 264 74 162 chr17 4001125 4001477 -91271174 + MTE2b LTR MaLR 1 321 -58 3 615 405 0 0 0 chr17 4001593 4001638 -91271013 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 615 374 57 0 19 chr17 4001638 4001692 -91270959 + (GA)n Simple_repeat Simple_repeat 2 54 0 5 615 30 59 0 0 chr17 4001695 4001746 -91270905 + AT_rich Low_complexity Low_complexity 1 51 0 6 615 767 330 138 29 chr17 4001839 4002317 -91270334 - MER45B DNA Tip100 -225 815 286 7 615 1064 203 37 5 chr17 4002470 4002688 -91269963 + URR1B DNA MER1_type 1 225 0 8 615 254 306 73 24 chr17 4003068 4003192 -91269459 - Charlie16a DNA MER1_type -69 273 144 9 615 3205 43 8 5 chr17 4003333 4003728 -91268923 + MTA_Mm LTR MaLR 1 396 0 1 615 449 162 14 0 chr17 4003760 4003834 -91268817 + RLTR16 LTR ERVK 1 75 -430 1 615 241 172 10 121 chr17 4005648 4005747 -91266904 + C-rich Low_complexity Low_complexity 3 90 0 1 615 297 0 0 0 chr17 4006323 4006356 -91266295 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 615 297 0 0 0 chr17 4006356 4006388 -91266263 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 615 261 300 12 48 chr17 4008966 4009050 -91263601 - L3 LINE CR1 -259 4230 4150 1 615 214 106 43 0 chr17 4009722 4009769 -91262882 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1 615 207 100 0 0 chr17 4009939 4009969 -91262682 + (A)n Simple_repeat Simple_repeat 1 30 0 1 615 8254 115 11 16 chr17 4010057 4011427 -91261224 + L1_Mur2 LINE L1 3681 5043 -834 1 615 2917 265 52 20 chr17 4012565 4013448 -91259203 - RCHARR1 DNA MER1_type -25 949 39 1 615 1051 91 28 0 chr17 4013662 4013805 -91258846 + B1_Mus1 SINE Alu 2 148 0 2 615 333 0 0 0 chr17 4014006 4014043 -91258608 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 615 553 266 112 29 chr17 4014131 4014336 -91258315 - B4A SINE B4 -69 223 2 2 615 293 328 25 25 chr17 4014731 4014850 -91257801 + MLT1C LTR MaLR 48 166 -301 2 615 320 243 0 14 chr17 4014912 4014983 -91257668 + MLT1C LTR MaLR 352 421 -46 2 615 202 292 0 0 chr17 4015074 4015122 -91257529 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 615 346 227 118 76 chr17 4015177 4015296 -91257355 - B4A SINE B4 -119 173 50 2 615 21 0 0 0 chr17 4015761 4015782 -91256869 + AT_rich Low_complexity Low_complexity 1 21 0 2 615 492 313 5 53 chr17 4016166 4016355 -91256296 - B4 SINE B4 0 292 113 2 615 23 54 0 0 chr17 4016626 4016663 -91255988 + AT_rich Low_complexity Low_complexity 1 37 0 2 615 315 0 0 0 chr17 4016984 4017019 -91255632 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 615 240 295 46 37 chr17 4017190 4017299 -91255352 - MIRb SINE MIR -131 137 28 3 615 622 187 166 241 chr17 4017407 4017623 -91255028 - ORR1C2 LTR MaLR 0 384 173 3 615 432 0 0 0 chr17 4017623 4017671 -91254980 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 615 622 187 166 241 chr17 4017671 4017869 -91254782 - ORR1C2 LTR MaLR -212 172 1 3 615 35556 22 1 7 chr17 4018140 4023135 -91249516 + L1Md_T LINE L1 633 5586 -297 3 615 8353 39 0 0 chr17 4023135 4024130 -91248521 + L1Md_T LINE L1 5587 6581 -1 3 615 221 329 0 0 chr17 4024245 4024321 -91248330 + GA-rich Low_complexity Low_complexity 5 80 0 3 615 785 329 3 7 chr17 4024615 4024906 -91247745 + B4 SINE B4 2 291 -1 3 615 339 220 58 17 chr17 4025039 4025159 -91247492 - ALINE LINE RTE -150 467 343 3 615 468 51 0 0 chr17 4025690 4025749 -91246902 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 615 4994 49 1 31 chr17 4025972 4026621 -91246030 - L1Md_F2 LINE L1 0 6582 5953 3 615 347 233 10 0 chr17 4026640 4026743 -91245908 + CT-rich Low_complexity Low_complexity 3 106 0 3 615 1901 245 42 30 chr17 4026826 4027331 -91245320 + MT2A LTR ERVL 1 511 -22 4 615 338 115 16 0 chr17 4027684 4027745 -91244906 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 615 267 256 16 49 chr17 4027762 4027863 -91244788 + (TGAG)n Simple_repeat Simple_repeat 1 97 0 4 615 544 82 59 0 chr17 4027863 4027998 -91244653 + (TG)n Simple_repeat Simple_repeat 1 143 0 4 615 652 138 49 8 chr17 4027998 4028297 -91244354 + (TG)n Simple_repeat Simple_repeat 1 311 0 4 615 204 40 0 0 chr17 4031025 4031050 -91241601 + (T)n Simple_repeat Simple_repeat 1 25 0 4 615 359 119 0 15 chr17 4031632 4031658 -91240993 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 615 369 0 0 0 chr17 4031658 4031699 -91240952 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 615 359 119 0 15 chr17 4031699 4031740 -91240911 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 615 2232 132 45 3 chr17 4031922 4032278 -91240373 + MTC LTR MaLR 51 421 0 4 615 394 226 60 0 chr17 4032900 4032984 -91239667 - ID_B1 SINE B4 -4 220 132 4 615 1020 234 41 0 chr17 4033251 4033448 -91239203 - B3 SINE B2 -1 215 11 5 615 616 264 7 21 chr17 4034890 4035033 -91237618 + MER31B LTR ERV1 13 153 -313 5 615 336 222 144 0 chr17 4035097 4035187 -91237464 + MER31B LTR ERV1 274 376 -90 5 615 184 312 94 0 chr17 4035339 4035435 -91237216 + MIRb SINE MIR 88 192 -76 5 615 32 26 0 0 chr17 4036831 4036870 -91235781 + AT_rich Low_complexity Low_complexity 1 39 0 5 615 253 190 57 28 chr17 4037483 4037624 -91235027 + (TA)n Simple_repeat Simple_repeat 1 145 0 5 615 416 242 21 0 chr17 4038070 4038165 -91234486 + B1_Mur1 SINE Alu 48 144 -5 5 615 528 16 0 0 chr17 4038431 4038492 -91234159 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 615 510 17 0 0 chr17 4039893 4039952 -91232699 + (CCCCCT)n Simple_repeat Simple_repeat 4 62 0 5 615 276 53 0 0 chr17 4039977 4040015 -91232636 + (T)n Simple_repeat Simple_repeat 1 38 0 5 615 1005 135 0 0 chr17 4041411 4041574 -91231077 + (TG)n Simple_repeat Simple_repeat 1 163 0 5 615 506 279 98 0 chr17 4041580 4041702 -91230949 - RSINE1 SINE B4 -29 136 3 6 615 1204 304 34 23 chr17 4041965 4042319 -91230332 + MTE2b LTR MaLR 2 359 -20 6 615 767 280 103 0 chr17 4042981 4043224 -91229427 - MTD LTR MaLR 0 419 152 6 615 250 284 34 0 chr17 4043642 4043730 -91228921 + MLT1E2 LTR MaLR 537 627 0 6 615 279 0 0 0 chr17 4043804 4043835 -91228816 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 615 534 290 71 0 chr17 4043837 4043992 -91228659 - B3A SINE B2 -29 169 4 6 615 245 348 79 18 chr17 4044228 4044342 -91228309 + LTR85a LTR Gypsy? 578 698 -4 6 615 324 0 0 0 chr17 4045598 4045634 -91227017 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 615 1256 227 50 24 chr17 4046637 4046975 -91225676 + MT2A LTR ERVL 186 532 -1 6 615 23 33 0 0 chr17 4048043 4048073 -91224578 + AT_rich Low_complexity Low_complexity 1 30 0 6 615 3427 23 5 0 chr17 4048371 4048765 -91223886 + MTA_Mm LTR MaLR 1 396 0 7 615 1400 29 0 6 chr17 4048847 4049019 -91223632 - L1Md_F3 LINE L1 -16 6568 6398 7 615 587 60 12 0 chr17 4049019 4049103 -91223548 + (GAAA)n Simple_repeat Simple_repeat 2 86 0 7 615 839 179 12 0 chr17 4049103 4049276 -91223375 + GA-rich Low_complexity Low_complexity 3 177 0 7 615 540 295 19 0 chr17 4049306 4049462 -91223189 + RSINE1 SINE B4 2 160 -5 7 615 495 0 0 0 chr17 4050989 4051044 -91221607 + (TC)n Simple_repeat Simple_repeat 2 56 0 7 615 387 0 0 0 chr17 4051044 4051086 -91221565 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 615 208 294 15 0 chr17 4051287 4051355 -91221296 + CT-rich Low_complexity Low_complexity 6 74 0 7 615 333 0 0 0 chr17 4051380 4051417 -91221234 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 615 293 236 6 3 chr17 4051612 4051687 -91220964 - B4A SINE B4 -88 77 1 7 615 1310 92 5 5 chr17 4052131 4052316 -91220335 + B2_Mm2 SINE B2 2 186 -9 8 615 233 275 30 90 chr17 4052442 4052542 -91220109 - RSINE1 SINE B4 -11 154 61 8 615 339 25 0 0 chr17 4053408 4053448 -91219203 + (TC)n Simple_repeat Simple_repeat 1 40 0 8 615 230 239 42 56 chr17 4054850 4054921 -91217730 + MLT2B2 LTR ERVL 1 70 -484 8 615 437 0 19 0 chr17 4054921 4054974 -91217677 + (TG)n Simple_repeat Simple_repeat 1 54 0 8 615 646 304 95 71 chr17 4055396 4055693 -91216958 + MLT2B2 LTR ERVL 252 552 -4 8 615 343 279 27 9 chr17 4056679 4056791 -91215860 + GA-rich Low_complexity Low_complexity 3 116 0 8 615 317 123 15 0 chr17 4056791 4056856 -91215795 + (GA)n Simple_repeat Simple_repeat 2 67 0 8 615 221 150 0 0 chr17 4057032 4057072 -91215579 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 8 615 1127 75 0 33 chr17 4057072 4057224 -91215427 - B1_Mus1 SINE Alu -1 147 1 8 615 302 327 84 6 chr17 4057392 4057558 -91215093 + L1M5 LINE L1 3810 3988 -2158 8 615 1267 151 32 5 chr17 4057619 4057839 -91214812 + URR1A DNA MER1_type 1 226 0 9 615 282 291 91 51 chr17 4058167 4058421 -91214230 + L1M5 LINE L1 4904 5167 -979 8 615 1721 294 63 43 chr17 4059061 4059758 -91212893 - Lx7 LINE L1 -388 7308 6598 9 615 2165 228 53 34 chr17 4059885 4060864 -91211787 + L1_Mus1 LINE L1 261 1205 -5433 9 615 27954 103 50 2 chr17 4060832 4063003 -91209648 + L1_Mus1 LINE L1 1108 3250 -2633 9 76 3116 35 0 0 chr17 4063003 4063376 -91209275 + L1Md_A LINE L1 6208 6580 -2 9 616 27954 101 52 1 chr17 4063376 4063595 -91209056 + L1_Mus1 LINE L1 3251 3475 -2408 9 616 228 86 0 0 chr17 4063595 4063630 -91209021 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 9 616 27954 96 43 1 chr17 4063630 4066013 -91206638 + L1_Mus1 LINE L1 3476 6073 -494 9 616 413 317 29 0 chr17 4066013 4066117 -91206534 + ID_B1 SINE B4 110 216 -8 9 616 1678 247 28 8 chr17 4066239 4066602 -91206049 + ORR1D1 LTR MaLR 5 374 0 9 616 2411 121 48 30 chr17 4067771 4068171 -91204480 + MTB_Mm LTR MaLR 1 407 0 9 616 243 328 52 29 chr17 4068969 4069119 -91203532 - MIRc SINE MIR -101 167 13 9 616 566 293 75 60 chr17 4069777 4070126 -91202525 + ORR1E LTR MaLR 4 357 -2 9 616 330 152 0 0 chr17 4070915 4070974 -91201677 + (TTA)n Simple_repeat Simple_repeat 2 60 0 1 616 495 0 0 0 chr17 4072207 4072262 -91200389 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 616 369 202 11 23 chr17 4072352 4072529 -91200122 + (CAGAGA)n Simple_repeat Simple_repeat 4 178 0 1 616 264 77 0 0 chr17 4072524 4072563 -91200088 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 616 483 60 0 0 chr17 4072638 4072705 -91199946 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 1 616 555 253 46 7 chr17 4072705 4072872 -91199779 - MTEa LTR MaLR -192 187 19 1 616 275 0 0 28 chr17 4073867 4073903 -91198748 + (TTTTTG)n Simple_repeat Simple_repeat 1 35 0 1 616 1100 74 122 6 chr17 4073979 4074143 -91198508 - B2_Mm2 SINE B2 -12 183 1 1 616 540 0 0 0 chr17 4074980 4075040 -91197611 + (GA)n Simple_repeat Simple_repeat 1 60 0 1 616 233 211 103 26 chr17 4075111 4075189 -91197462 + MIRb SINE MIR 96 179 -89 1 616 1910 139 36 59 chr17 4077495 4077832 -91194819 - ORR1A4 LTR MaLR 0 329 1 1 616 648 296 81 47 chr17 4078419 4079200 -91193451 + L1MD LINE L1 2133 2939 -3207 1 616 351 294 86 52 chr17 4079233 4079639 -91193012 + L1MD LINE L1 3144 3563 -2583 1 616 692 249 90 109 chr17 4079755 4080021 -91192630 - B4A SINE B4 -20 272 12 1 616 225 0 0 0 chr17 4080046 4080071 -91192580 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 616 263 315 107 9 chr17 4080104 4080216 -91192435 + PB1 SINE Alu 1 123 -4 1 616 684 293 0 7 chr17 4080233 4080384 -91192267 + B3A SINE B2 6 155 -43 1 616 259 52 68 17 chr17 4080388 4080447 -91192204 + (TA)n Simple_repeat Simple_repeat 1 62 0 1 616 229 234 122 4 chr17 4080691 4080781 -91191870 + L1M5 LINE L1 5540 5637 -525 1 616 595 324 34 67 chr17 4080928 4081226 -91191425 + B4A SINE B4 5 292 0 1 616 396 0 0 0 chr17 4081269 4081313 -91191338 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 616 36893 5 0 0 chr17 4082095 4087259 -91185392 + L1Md_A LINE L1 422 5586 -297 1 616 9026 4 0 0 chr17 4087259 4088255 -91184396 + L1Md_A LINE L1 5587 6582 0 1 616 312 70 0 0 chr17 4088261 4088304 -91184347 + (A)n Simple_repeat Simple_repeat 1 43 0 1 616 3643 60 22 2 chr17 4088809 4089273 -91183378 + MT2C_Mm LTR ERVL 1 473 -2 1 616 23 33 0 0 chr17 4089903 4089933 -91182718 + AT_rich Low_complexity Low_complexity 1 30 0 1 616 596 301 14 6 chr17 4089946 4090103 -91182548 - RSINE1 SINE B4 -11 154 1 1 616 252 0 0 0 chr17 4090348 4090376 -91182275 + (A)n Simple_repeat Simple_repeat 1 28 0 1 616 847 209 98 44 chr17 4090467 4090672 -91181979 + B3 SINE B2 1 216 0 1 616 587 278 90 0 chr17 4091559 4091703 -91180948 + B4A SINE B4 1 157 -135 1 616 257 365 0 9 chr17 4091746 4091851 -91180800 + (CA)n Simple_repeat Simple_repeat 1 104 0 1 616 239 392 39 44 chr17 4092698 4092901 -91179750 - MamRep605 Unknown Unknown -109 767 566 1 616 890 97 22 33 chr17 4094994 4095176 -91177475 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1 616 229 319 63 11 chr17 4095608 4095703 -91176948 + PB1D9 SINE Alu 1 100 -20 1 616 653 0 13 0 chr17 4095704 4095781 -91176870 + (TC)n Simple_repeat Simple_repeat 1 78 0 1 616 912 294 84 40 chr17 4096083 4096713 -91175938 - L1ME1 LINE L1 -214 6138 5481 1 616 644 281 86 5 chr17 4096729 4096926 -91175725 + B3 SINE B2 1 213 -3 1 616 25 51 0 0 chr17 4097100 4097139 -91175512 + AT_rich Low_complexity Low_complexity 1 39 0 1 616 550 316 10 26 chr17 4097247 4097442 -91175209 + RMER30 DNA MER1_type 11 202 0 1 616 402 321 99 27 chr17 4097703 4098512 -91174139 - L1ME1 LINE L1 -4854 1546 680 1 616 846 188 0 7 chr17 4098959 4099109 -91173542 + B1_Mur4 SINE Alu 2 150 0 1 616 232 280 35 70 chr17 4099127 4099242 -91173409 - L1ME1 LINE L1 -6251 149 39 1 616 21 0 0 0 chr17 4099508 4099529 -91173122 + AT_rich Low_complexity Low_complexity 1 21 0 1 616 303 310 209 27 chr17 4099646 4099905 -91172746 + L1MC4 LINE L1 6703 7008 -1034 1 616 341 275 88 0 chr17 4100194 4100285 -91172366 - PB1D10 SINE Alu -8 109 11 1 616 249 237 0 17 chr17 4100832 4100892 -91171759 + MIR SINE MIR 90 148 -114 1 616 255 250 137 71 chr17 4100975 4100995 -91171656 - B2_Mm2 SINE B2 -16 179 164 1 616 324 0 0 0 chr17 4100995 4101031 -91171620 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 616 518 250 137 71 chr17 4101031 4101178 -91171473 - B3A SINE B2 -34 164 1 1 616 295 287 60 12 chr17 4102811 4102944 -91169707 + MIR SINE MIR 1 129 -133 1 616 228 319 14 0 chr17 4103664 4103736 -91168915 - MLT1A1 LTR MaLR -81 327 255 1 616 1067 124 0 6 chr17 4103746 4103924 -91168727 + (TTCC)n Simple_repeat Simple_repeat 2 178 0 1 616 635 266 171 51 chr17 4103925 4104159 -91168492 - B4A SINE B4 -30 262 1 1 616 270 81 0 0 chr17 4105875 4105912 -91166739 + (TTA)n Simple_repeat Simple_repeat 1 37 0 1 616 22 35 0 0 chr17 4105941 4105970 -91166681 + AT_rich Low_complexity Low_complexity 1 29 0 1 616 321 312 53 53 chr17 4106030 4106162 -91166489 - B3A SINE B2 -22 176 45 1 616 333 0 0 0 chr17 4106197 4106234 -91166417 + (A)n Simple_repeat Simple_repeat 1 37 0 1 616 749 90 9 0 chr17 4107205 4107316 -91165335 + (GA)n Simple_repeat Simple_repeat 1 112 0 1 616 261 325 0 0 chr17 4107547 4107627 -91165024 - MER117 DNA MER1_type -17 180 101 1 616 33 0 0 0 chr17 4108388 4108421 -91164230 + AT_rich Low_complexity Low_complexity 1 33 0 1 616 214 197 109 47 chr17 4108516 4108580 -91164071 - B3 SINE B2 -148 68 1 1 616 444 250 95 48 chr17 4109348 4109537 -91163114 + B3A SINE B2 1 198 0 1 616 837 314 97 23 chr17 4109938 4110287 -91162364 + MTE2b LTR MaLR 1 375 -4 1 616 180 189 54 0 chr17 4110423 4110460 -91162191 - L2c LINE L2 -68 3319 3281 1 616 3244 87 35 2 chr17 4110576 4111036 -91161615 + MT2C_Mm LTR ERVL 1 475 0 1 616 992 35 28 14 chr17 4111075 4111220 -91161431 + (AGGGGG)n Simple_repeat Simple_repeat 6 152 0 1 616 657 351 37 54 chr17 4111234 4111529 -91161122 + B4 SINE B4 3 292 0 1 616 387 0 0 0 chr17 4111544 4111587 -91161064 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 616 298 357 53 27 chr17 4112268 4112455 -91160196 + MIRb SINE MIR 18 209 -59 1 616 311 156 0 30 chr17 4114513 4114612 -91158039 + T-rich Low_complexity Low_complexity 1 96 0 1 616 719 222 101 21 chr17 4116388 4116577 -91156074 - B3 SINE B2 -12 204 1 1 616 443 318 50 40 chr17 4116995 4117296 -91155355 - L1ME4a LINE L1 -270 5854 5551 1 616 721 298 76 100 chr17 4118501 4118960 -91153691 - MLT2B1 LTR ERVL -1 519 72 1 616 1721 196 119 24 chr17 4119607 4119860 -91152791 + RMER4B LTR ERVK 1 295 -290 1 616 477 14 0 41 chr17 4119860 4119933 -91152718 + (CTG)n Simple_repeat Simple_repeat 3 72 0 1 616 1721 196 119 24 chr17 4119933 4120091 -91152560 + RMER4B LTR ERVK 296 451 -134 1 616 324 0 0 0 chr17 4120101 4120137 -91152514 + (TC)n Simple_repeat Simple_repeat 2 37 0 1 616 180 0 0 0 chr17 4120191 4120211 -91152440 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1 616 309 254 219 0 chr17 4120937 4121051 -91151600 + B1F SINE Alu 3 141 -8 1 616 273 29 0 0 chr17 4121363 4121397 -91151254 + (A)n Simple_repeat Simple_repeat 1 34 0 1 616 1379 224 54 10 chr17 4121402 4121700 -91150951 - ORR1D2 LTR MaLR -59 311 1 1 616 317 388 32 71 chr17 4122040 4122323 -91150328 + B4A SINE B4 3 274 -18 1 616 428 0 19 0 chr17 4122443 4122495 -91150156 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 616 717 114 0 0 chr17 4123630 4123744 -91148907 + (GA)n Simple_repeat Simple_repeat 2 115 0 1 616 321 317 119 24 chr17 4123877 4124087 -91148564 + L1M4 LINE L1 3446 3675 -2471 1 616 307 259 144 96 chr17 4124090 4124278 -91148373 + B3A SINE B2 2 198 0 1 616 878 284 5 0 chr17 4125750 4125961 -91146690 - B3 SINE B2 -4 212 1 1 616 438 165 0 0 chr17 4126143 4126222 -91146429 + T-rich Low_complexity Low_complexity 102 180 0 1 616 216 97 0 0 chr17 4126221 4126252 -91146399 + (TCC)n Simple_repeat Simple_repeat 3 33 0 1 616 280 250 47 0 chr17 4126307 4126371 -91146280 - ID4 SINE ID -14 69 3 1 616 6060 99 67 14 chr17 4126397 4127322 -91145329 + Lx3_Mus LINE L1 6028 7001 -8 1 616 393 305 38 0 chr17 4127335 4127440 -91145211 - PB1 SINE Alu -7 120 12 1 616 356 237 0 13 chr17 4127723 4127800 -91144851 - B3A SINE B2 -120 78 3 1 616 2375 57 63 3 chr17 4128114 4128433 -91144218 - ORR1A1 LTR MaLR -8 338 1 1 616 361 178 64 43 chr17 4129276 4129370 -91143281 + B3 SINE B2 5 100 -98 1 616 518 291 64 0 chr17 4129377 4129518 -91143133 - B3A SINE B2 -46 152 3 1 616 374 39 19 0 chr17 4130050 4130102 -91142549 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 616 450 300 63 14 chr17 4130155 4130297 -91142354 + MLT1A0 LTR MaLR 3 151 -214 1 616 254 319 128 8 chr17 4130318 4130435 -91142216 + MLT1A0 LTR MaLR 237 367 -7 1 616 266 264 28 0 chr17 4130612 4130684 -91141967 + (CATG)n Simple_repeat Simple_repeat 3 76 0 1 616 27 29 0 0 chr17 4130698 4130732 -91141919 + AT_rich Low_complexity Low_complexity 1 34 0 1 616 21 36 0 0 chr17 4130806 4130834 -91141817 + AT_rich Low_complexity Low_complexity 1 28 0 1 616 338 258 32 0 chr17 4132616 4132709 -91139942 - L1M6 LINE L1 -5205 1291 1196 1 616 237 264 99 46 chr17 4133710 4133861 -91138790 - L1M6 LINE L1 -6322 174 16 1 616 225 247 110 30 chr17 4134929 4135029 -91137622 + MTEa LTR MaLR 264 371 -8 1 616 800 186 6 0 chr17 4135714 4135886 -91136765 + GA-rich Low_complexity Low_complexity 4 176 0 1 616 596 179 18 13 chr17 4136175 4136408 -91136243 + (TG)n Simple_repeat Simple_repeat 1 234 0 1 616 504 0 0 0 chr17 4136408 4136464 -91136187 + (GA)n Simple_repeat Simple_repeat 1 56 0 1 616 573 105 0 0 chr17 4137301 4137387 -91135264 + (GGAA)n Simple_repeat Simple_repeat 3 88 0 2 616 1511 135 4 17 chr17 4137989 4138223 -91134428 - MTC LTR MaLR -54 367 137 2 616 1919 197 38 16 chr17 4138226 4138650 -91134001 + Lx5 LINE L1 6608 7040 -10 2 616 285 308 53 42 chr17 4138658 4138753 -91133898 + MER20 DNA MER1_type 64 159 -60 2 616 301 286 71 0 chr17 4139020 4139104 -91133547 - L1MDa LINE L1 -4111 2522 2433 2 616 24 32 0 0 chr17 4139362 4139393 -91133258 + AT_rich Low_complexity Low_complexity 1 31 0 2 616 228 135 0 0 chr17 4139453 4139490 -91133161 + (T)n Simple_repeat Simple_repeat 1 37 0 2 616 216 0 0 0 chr17 4139681 4139705 -91132946 + (T)n Simple_repeat Simple_repeat 1 24 0 2 616 671 298 68 26 chr17 4140335 4140652 -91131999 + MLT1B LTR MaLR 66 364 -26 2 616 247 280 166 72 chr17 4141580 4141803 -91130848 - L2 LINE L2 -741 2678 2435 2 616 263 283 40 0 chr17 4142228 4142327 -91130324 - L1MA5 LINE L1 -35 6265 6163 2 616 229 269 0 60 chr17 4142815 4142898 -91129753 + (TATATG)n Simple_repeat Simple_repeat 4 81 0 2 616 704 303 39 46 chr17 4142903 4143183 -91129468 - B4A SINE B4 -14 278 1 2 616 23 33 0 0 chr17 4143327 4143357 -91129294 + AT_rich Low_complexity Low_complexity 1 30 0 2 616 1221 55 0 0 chr17 4143785 4143931 -91128720 + B1_Mus2 SINE Alu 2 147 0 2 616 429 218 89 0 chr17 4143945 4144046 -91128605 - B3A SINE B2 -62 136 27 2 616 323 250 34 0 chr17 4144111 4144199 -91128452 - MLT2C1 LTR ERVL -262 135 45 2 616 1310 67 6 0 chr17 4144670 4144848 -91127803 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 2 616 2515 66 30 3 chr17 4145010 4145343 -91127308 + L1_Mus1 LINE L1 6226 6567 0 2 616 320 291 23 23 chr17 4146238 4146326 -91126325 + PB1D10 SINE Alu 1 88 -29 2 616 10373 143 8 6 chr17 4146338 4149007 -91123644 + Lx2 LINE L1 3944 6625 -372 2 616 313 282 183 0 chr17 4149036 4149167 -91123484 + B3A SINE B2 1 155 -43 2 616 1956 69 0 0 chr17 4149170 4149430 -91123221 - L1_Mus1 LINE L1 -87 6480 6221 2 616 3416 58 7 0 chr17 4149412 4149860 -91122791 + L1_Mus1 LINE L1 5760 6210 -357 2 616 31 58 0 0 chr17 4150029 4150081 -91122570 + AT_rich Low_complexity Low_complexity 1 52 0 2 616 1022 228 0 40 chr17 4151026 4151250 -91121401 + B3 SINE B2 1 215 -1 2 616 299 45 45 0 chr17 4152551 4152595 -91120056 + (TATG)n Simple_repeat Simple_repeat 2 47 0 2 616 25 0 0 0 chr17 4152705 4152730 -91119921 + AT_rich Low_complexity Low_complexity 1 25 0 2 616 885 41 156 0 chr17 4153603 4153725 -91118926 + B1_Mm SINE Alu 2 142 -5 2 616 453 19 0 0 chr17 4153730 4153784 -91118867 + (GAAAA)n Simple_repeat Simple_repeat 2 55 0 2 616 390 94 0 0 chr17 4153865 4153929 -91118722 + (A)n Simple_repeat Simple_repeat 1 64 0 2 616 669 289 123 31 chr17 4155299 4155624 -91117027 + MLT1A LTR MaLR 7 361 -13 2 616 265 32 0 0 chr17 4156179 4156221 -91116430 + (GA)n Simple_repeat Simple_repeat 1 42 0 2 616 618 154 40 0 chr17 4156221 4156370 -91116281 + GA-rich Low_complexity Low_complexity 2 156 0 2 616 227 300 88 0 chr17 4157432 4157512 -91115139 + MTEb LTR MaLR 278 364 -15 2 616 714 324 32 9 chr17 4157627 4157848 -91114803 + B4 SINE B4 1 226 -66 2 616 572 288 46 80 chr17 4157850 4158152 -91114499 + B4 SINE B4 1 292 0 2 616 225 0 0 0 chr17 4158164 4158189 -91114462 + (CG)n Simple_repeat Simple_repeat 2 26 0 2 616 1696 220 66 15 chr17 4158982 4159374 -91113277 - MTD LTR MaLR 0 419 8 2 616 207 0 0 0 chr17 4159374 4159397 -91113254 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 616 624 273 28 28 chr17 4160242 4160457 -91112194 - B3 SINE B2 0 216 2 2 616 686 239 215 17 chr17 4160753 4160783 -91111868 - ORR1D1 LTR MaLR -17 357 328 2 616 2934 51 67 0 chr17 4160783 4161154 -91111497 + MTA_Mm LTR MaLR 1 396 0 2 616 686 239 215 17 chr17 4161154 4161168 -91111483 - ORR1D1 LTR MaLR -47 327 305 2 616 2604 53 0 0 chr17 4161168 4161491 -91111160 - L1Md_A LINE L1 -2 6580 6258 2 616 686 239 215 17 chr17 4161491 4161743 -91110908 - ORR1D1 LTR MaLR -70 304 2 2 616 227 276 21 183 chr17 4161764 4161775 -91110876 + PB1D9 SINE Alu 2 40 -80 2 616 321 295 134 0 chr17 4161775 4161887 -91110764 + ID_B1 SINE B4 91 217 -7 2 616 227 276 21 183 chr17 4161887 4161906 -91110745 + PB1D9 SINE Alu 41 120 0 2 616 248 0 31 0 chr17 4162225 4162257 -91110394 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2 616 458 322 77 53 chr17 4163547 4163885 -91108766 + MLT1A0 LTR MaLR 3 348 -17 2 616 29 0 0 0 chr17 4164143 4164172 -91108479 + AT_rich Low_complexity Low_complexity 1 29 0 2 616 231 250 0 0 chr17 4164285 4164369 -91108282 + (TG)n Simple_repeat Simple_repeat 1 84 0 2 616 204 97 0 0 chr17 4164537 4164568 -91108083 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 616 300 276 65 13 chr17 4164602 4164679 -91107972 - B4 SINE B4 -211 81 1 2 616 356 40 0 20 chr17 4164711 4164762 -91107889 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 616 218 116 23 0 chr17 4164777 4164820 -91107831 + (GA)n Simple_repeat Simple_repeat 2 45 0 2 616 452 259 127 18 chr17 4164839 4165004 -91107647 - B3A SINE B2 -15 183 1 2 616 1953 268 92 39 chr17 4166126 4166712 -91105939 + RCHARR1 DNA MER1_type 3 612 -362 2 616 231 36 0 0 chr17 4166712 4166740 -91105911 + (TATG)n Simple_repeat Simple_repeat 1 28 0 2 616 1953 268 92 39 chr17 4166740 4166890 -91105761 + RCHARR1 DNA MER1_type 613 777 -197 2 616 1967 163 32 14 chr17 4166891 4167239 -91105412 - ORR1B1 LTR MaLR 0 394 41 2 616 536 271 84 20 chr17 4167224 4167427 -91105224 + RCHARR1 DNA MER1_type 755 970 -4 2 616 418 289 74 77 chr17 4167629 4167914 -91104737 + LTR37A LTR ERV1 143 426 0 2 616 4153 52 0 0 chr17 4167936 4168417 -91104234 + L1Md_F2 LINE L1 6090 6570 -12 2 616 970 248 15 0 chr17 4168774 4168976 -91103675 - B3 SINE B2 0 216 12 2 616 320 357 72 47 chr17 4169033 4169268 -91103383 - L1M5 LINE L1 -455 5785 5545 2 616 222 231 19 0 chr17 4169855 4169907 -91102744 + CT-rich Low_complexity Low_complexity 3 55 0 2 616 226 232 67 44 chr17 4170182 4170272 -91102379 - L1MC LINE L1 -1579 4567 4476 2 616 25 0 0 0 chr17 4171354 4171379 -91101272 + AT_rich Low_complexity Low_complexity 1 25 0 2 616 234 116 0 0 chr17 4172285 4172328 -91100323 + (G)n Simple_repeat Simple_repeat 1 43 0 2 616 389 35 53 0 chr17 4172796 4172853 -91099798 + (CAAAA)n Simple_repeat Simple_repeat 2 61 0 2 616 389 200 112 94 chr17 4172896 4173056 -91099595 + Tigger7 DNA MER2_type 2317 2479 -12 2 616 488 186 86 29 chr17 4173367 4173472 -91099179 - PB1D10 SINE Alu -1 116 6 2 616 405 0 0 0 chr17 4173523 4173568 -91099083 + (TTCTC)n Simple_repeat Simple_repeat 1 45 0 2 616 744 149 35 0 chr17 4173569 4173743 -91098908 + CT-rich Low_complexity Low_complexity 1 180 0 2 616 265 171 92 79 chr17 4174530 4174606 -91098045 + ID4 SINE ID 3 79 -4 2 616 333 0 0 0 chr17 4174607 4174644 -91098007 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 616 315 0 0 0 chr17 4175660 4175695 -91096956 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 616 237 65 0 0 chr17 4176198 4176229 -91096422 + (TTG)n Simple_repeat Simple_repeat 2 32 0 2 616 520 267 85 31 chr17 4176548 4176772 -91095879 + ORR1E LTR MaLR 1 236 -123 2 616 188 86 0 28 chr17 4176834 4176870 -91095781 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 2 616 1230 82 0 0 chr17 4176873 4177020 -91095631 - B1_Mus1 SINE Alu 0 148 2 2 616 284 244 10 0 chr17 4178298 4178373 -91094278 + ID4_ SINE ID 2 79 -73 2 616 478 297 224 41 chr17 4178871 4179117 -91093534 + B4 SINE B4 2 292 0 2 616 744 199 36 7 chr17 4179350 4179487 -91093164 + B3A SINE B2 3 143 -55 2 616 444 171 0 0 chr17 4179559 4179641 -91093010 + (TAGA)n Simple_repeat Simple_repeat 1 82 0 2 616 724 314 11 26 chr17 4180154 4180344 -91092307 + B4A SINE B4 104 290 -2 2 616 1237 156 88 0 chr17 4180617 4180822 -91091829 + URR1A DNA MER1_type 1 223 -3 2 616 243 0 0 0 chr17 4181325 4181352 -91091299 + (T)n Simple_repeat Simple_repeat 1 27 0 2 616 212 283 0 0 chr17 4181696 4181742 -91090909 + MIRc SINE MIR 75 120 -148 2 616 543 16 0 0 chr17 4182594 4182658 -91089993 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 616 855 291 15 5 chr17 4182702 4182902 -91089749 - B4A SINE B4 -88 204 3 2 616 510 17 0 0 chr17 4182914 4182973 -91089678 + (TATG)n Simple_repeat Simple_repeat 1 59 0 2 616 223 367 9 35 chr17 4183016 4183129 -91089522 + MIRb SINE MIR 91 200 -68 2 616 240 35 0 0 chr17 4183177 4183206 -91089445 + (TTG)n Simple_repeat Simple_repeat 1 29 0 2 616 990 0 0 0 chr17 4183215 4183325 -91089326 + (TTC)n Simple_repeat Simple_repeat 2 111 0 2 616 1120 96 0 20 chr17 4183325 4183464 -91089187 - B1_Mus1 SINE Alu -11 137 2 2 616 441 272 20 93 chr17 4183716 4183866 -91088785 - B4 SINE B4 0 292 154 2 616 333 170 184 41 chr17 4183958 4184056 -91088595 - B4 SINE B4 -159 133 22 2 616 252 0 0 0 chr17 4184290 4184318 -91088333 + (T)n Simple_repeat Simple_repeat 1 28 0 2 616 1245 52 0 0 chr17 4185508 4185661 -91086990 - B2_Mm2 SINE B2 -38 157 5 2 616 599 182 25 0 chr17 4186248 4186500 -91086151 + (TA)n Simple_repeat Simple_repeat 1 258 0 2 616 315 276 126 36 chr17 4186623 4186845 -91085806 - L2a LINE L2 -252 3174 2933 2 616 375 278 0 29 chr17 4187137 4187274 -91085377 + (TG)n Simple_repeat Simple_repeat 2 134 0 2 616 315 0 0 0 chr17 4187447 4187482 -91085169 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 2 616 1097 116 0 0 chr17 4187493 4187639 -91085012 - B1_Mus2 SINE Alu 0 147 2 3 616 891 262 34 15 chr17 4187869 4188194 -91084457 - Charlie2a DNA MER1_type -3 2858 2528 3 616 1013 279 107 75 chr17 4188412 4189056 -91083595 - Charlie2a DNA MER1_type -728 2133 1469 3 616 437 269 110 101 chr17 4189351 4189669 -91082982 - ORR1E LTR MaLR 0 359 39 3 616 1489 255 92 17 chr17 4189671 4190154 -91082497 + RMER20B LTR ERVK 1 516 0 3 616 203 291 156 7 chr17 4190843 4190978 -91081673 - MIRc SINE MIR -112 156 2 3 616 260 348 53 75 chr17 4191586 4191786 -91080865 + B4 SINE B4 78 282 -10 3 616 495 48 0 0 chr17 4191824 4191886 -91080765 + (GA)n Simple_repeat Simple_repeat 2 63 0 3 616 263 213 33 0 chr17 4191886 4191947 -91080704 + GA-rich Low_complexity Low_complexity 2 64 0 3 616 230 320 0 26 chr17 4192096 4192173 -91080478 + B4 SINE B4 1 75 -217 3 616 711 0 0 0 chr17 4192210 4192289 -91080362 + (TTC)n Simple_repeat Simple_repeat 3 81 0 3 616 674 267 90 94 chr17 4192613 4192890 -91079761 + B4 SINE B4 1 276 -16 3 616 202 328 86 58 chr17 4192967 4193106 -91079545 + MIRc SINE MIR 45 187 -81 3 616 503 226 42 25 chr17 4194146 4194264 -91078387 - ID_B1 SINE B4 0 224 105 3 617 1423 97 11 0 chr17 4194518 4194704 -91077947 - B2_Mm1t SINE B2 -3 190 3 3 617 744 221 36 18 chr17 4197428 4197594 -91075057 + L3 LINE CR1 3795 3963 -526 3 617 639 71 0 0 chr17 4198960 4199045 -91073606 + (GAAA)n Simple_repeat Simple_repeat 1 85 0 3 617 277 172 125 0 chr17 4199181 4199245 -91073406 + RLTR42-int LTR ERVK 1548 1619 -3903 3 617 520 244 129 11 chr17 4200477 4200655 -91071996 + Lx8 LINE L1 6923 7121 -352 3 617 692 200 0 9 chr17 4200708 4200942 -91071709 + (CA)n Simple_repeat Simple_repeat 1 231 0 3 617 22 35 0 0 chr17 4201871 4201900 -91070751 + AT_rich Low_complexity Low_complexity 1 29 0 3 617 1219 235 52 4 chr17 4202433 4202702 -91069949 + Lx5 LINE L1 6768 7049 -1 3 617 1456 203 169 0 chr17 4203003 4203328 -91069323 - RLTR14 LTR ERV1 0 382 3 3 617 813 269 13 66 chr17 4203358 4203585 -91069066 - B3 SINE B2 0 216 2 3 617 45 19 0 0 chr17 4203667 4203719 -91068932 + AT_rich Low_complexity Low_complexity 1 52 0 3 617 590 279 92 13 chr17 4204095 4204324 -91068327 + Tigger5 DNA MER2_type 2132 2378 -28 3 617 4721 17 0 0 chr17 4204347 4204878 -91067773 + L1Md_A LINE L1 5056 5586 -297 3 617 9178 24 0 0 chr17 4204878 4205873 -91066778 + L1Md_A LINE L1 5587 6581 -1 3 617 249 33 0 0 chr17 4206017 4206047 -91066604 + (A)n Simple_repeat Simple_repeat 1 30 0 3 617 233 374 56 37 chr17 4206180 4206394 -91066257 + MIR SINE MIR 11 228 -34 3 617 297 68 0 0 chr17 4206473 4206517 -91066134 + (T)n Simple_repeat Simple_repeat 1 44 0 3 617 25 0 0 0 chr17 4207050 4207075 -91065576 + AT_rich Low_complexity Low_complexity 1 25 0 3 617 259 146 0 0 chr17 4207170 4207218 -91065433 - Lx8 LINE L1 -6 7467 7420 3 617 267 247 157 0 chr17 4207231 4207320 -91065331 + Lx8 LINE L1 7237 7339 -134 3 617 541 218 0 38 chr17 4207582 4207768 -91064883 + (TG)n Simple_repeat Simple_repeat 2 180 0 3 617 426 251 6 11 chr17 4207817 4207998 -91064653 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 617 497 279 90 96 chr17 4208160 4208516 -91064135 - AmnSINE1 SINE SINE -5 570 217 3 617 3554 43 2 0 chr17 4208914 4209309 -91063342 - MTA_Mm LTR MaLR 0 396 1 3 617 295 297 109 0 chr17 4210658 4210759 -91061892 + PB1D10 SINE Alu 6 117 0 3 617 357 308 37 0 chr17 4210835 4210942 -91061709 + B1F SINE Alu 18 128 -21 3 617 501 291 145 42 chr17 4211189 4211547 -91061104 + L1M5 LINE L1 5293 5687 -492 3 617 2457 109 3 0 chr17 4211709 4212030 -91060621 - ORR1A3 LTR MaLR 0 326 5 3 617 233 29 29 0 chr17 4212123 4212157 -91060494 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 617 406 301 32 16 chr17 4213745 4213870 -91058781 + B1F SINE Alu 23 149 0 3 617 270 0 0 0 chr17 4214773 4214803 -91057848 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 3 617 255 281 0 58 chr17 4215024 4215111 -91057540 + MIRb SINE MIR 156 237 -31 3 617 195 322 0 0 chr17 4215130 4215189 -91057462 - L2 LINE L2 -640 2779 2721 3 617 266 73 24 0 chr17 4216777 4216818 -91055833 + (TC)n Simple_repeat Simple_repeat 1 42 0 3 617 2869 72 89 18 chr17 4218301 4218681 -91053970 - MTB_Mm LTR MaLR 0 407 1 3 617 528 16 0 0 chr17 4218688 4218749 -91053902 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 617 404 105 0 13 chr17 4218749 4218826 -91053825 + (GA)n Simple_repeat Simple_repeat 1 76 0 3 617 261 0 0 0 chr17 4219766 4219795 -91052856 + (A)n Simple_repeat Simple_repeat 1 29 0 3 617 229 306 16 0 chr17 4220342 4220404 -91052247 + ID4 SINE ID 7 69 -14 3 617 420 20 0 0 chr17 4220602 4220651 -91052000 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 617 326 319 126 97 chr17 4222588 4222866 -91049785 + B4A SINE B4 5 290 -2 3 617 416 339 97 13 chr17 4222891 4223118 -91049533 + Tigger9b DNA MER2_type 1 246 -378 3 617 180 0 0 0 chr17 4223285 4223305 -91049346 + (A)n Simple_repeat Simple_repeat 1 20 0 3 617 362 284 191 41 chr17 4223884 4224225 -91048426 + L2a LINE L2 2482 2873 -546 3 617 457 350 29 49 chr17 4224340 4224674 -91047977 + L2a LINE L2 3052 3424 -2 3 617 413 345 96 26 chr17 4225592 4225863 -91046788 + B4A SINE B4 1 290 -2 3 617 220 267 0 0 chr17 4225918 4225963 -91046688 + G-rich Low_complexity Low_complexity 5 49 0 3 617 506 336 75 0 chr17 4226091 4226237 -91046414 + RSINE1 SINE B4 3 159 -6 3 617 194 128 26 0 chr17 4226257 4226296 -91046355 + (TAGA)n Simple_repeat Simple_repeat 2 41 0 3 617 354 314 82 124 chr17 4228309 4228600 -91044051 + B4 SINE B4 3 281 -11 3 617 258 32 0 0 chr17 4228634 4228665 -91043986 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 3 617 905 220 77 13 chr17 4229656 4229891 -91042760 - ORR1D2 LTR MaLR -120 250 1 3 617 687 271 27 58 chr17 4229996 4230255 -91042396 + Tigger7 DNA MER2_type 355 605 -1886 3 617 920 270 91 40 chr17 4231012 4231286 -91041365 + B4 SINE B4 1 288 -4 3 617 186 118 0 0 chr17 4231830 4231864 -91040787 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 3 617 1101 64 0 0 chr17 4231872 4232012 -91040639 - B1_Mus1 SINE Alu -1 147 8 3 617 286 275 122 70 chr17 4232417 4232859 -91039792 + HAL1 LINE L1 814 1278 -1229 3 617 476 332 57 50 chr17 4232914 4233193 -91039458 + B4 SINE B4 1 281 -11 3 617 228 164 49 0 chr17 4233293 4233354 -91039297 + (TTAAA)n Simple_repeat Simple_repeat 5 68 0 3 617 5392 281 79 36 chr17 4234376 4237263 -91035388 - L1MA9 LINE L1 0 6312 3257 3 617 1615 43 27 0 chr17 4237263 4237450 -91035201 - B2_Mm1t SINE B2 0 193 2 3 617 5392 285 69 35 chr17 4237450 4237954 -91034697 - L1MA9 LINE L1 -2884 3256 2729 3 617 216 0 0 0 chr17 4238384 4238408 -91034243 + (A)n Simple_repeat Simple_repeat 1 24 0 3 617 291 190 0 0 chr17 4238875 4238933 -91033718 + (TAAA)n Simple_repeat Simple_repeat 2 59 0 3 617 1814 152 89 9 chr17 4239018 4239344 -91033307 + ORR1B1 LTR MaLR 41 392 -2 3 617 3392 56 8 0 chr17 4239829 4240222 -91032429 - MTA_Mm LTR MaLR 0 396 1 3 617 8270 79 28 3 chr17 4240222 4241293 -91031358 - MTA_Mm-int LTR MaLR 0 1098 1 3 617 3409 56 5 0 chr17 4241293 4241687 -91030964 - MTA_Mm LTR MaLR 0 396 1 3 617 1288 238 132 19 chr17 4241897 4242261 -91030390 - MTD LTR MaLR -14 405 1 3 617 310 226 28 19 chr17 4243307 4243394 -91029257 + MTEa LTR MaLR 280 365 -14 3 617 21 0 0 0 chr17 4244278 4244299 -91028352 + AT_rich Low_complexity Low_complexity 1 21 0 3 617 250 356 33 0 chr17 4245342 4245432 -91027219 + B1F SINE Alu 44 136 -13 3 617 330 26 0 0 chr17 4245573 4245612 -91027039 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 617 198 118 0 0 chr17 4245618 4245652 -91026999 + (CATATA)n Simple_repeat Simple_repeat 4 37 0 3 617 1115 238 71 25 chr17 4245851 4246217 -91026434 - Lx9 LINE L1 0 7644 7262 3 617 575 185 0 18 chr17 4246212 4246322 -91026329 - Lx9 LINE L1 -829 6815 6708 3 617 3023 87 2 24 chr17 4246553 4246977 -91025674 + L1_Mus4 LINE L1 6222 6636 0 3 617 235 289 77 26 chr17 4247158 4247236 -91025415 + MLT2B3 LTR ERVL 43 124 -430 3 617 1022 311 22 30 chr17 4247390 4247765 -91024886 - MTE2a LTR MaLR -42 377 3 3 617 839 194 156 25 chr17 4248061 4248179 -91024472 - Lx9 LINE L1 -3 7641 7519 3 617 384 22 0 0 chr17 4248179 4248224 -91024427 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 617 189 0 0 0 chr17 4248224 4248244 -91024407 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 617 839 194 156 25 chr17 4248244 4248362 -91024289 - Lx9 LINE L1 -126 7518 7374 3 617 417 208 55 16 chr17 4248425 4248552 -91024099 - ORR1D2 LTR MaLR -38 332 201 3 617 368 111 16 0 chr17 4251374 4251437 -91021214 + (TTCTG)n Simple_repeat Simple_repeat 4 67 0 3 617 239 266 49 25 chr17 4251549 4251630 -91021021 - Charlie19a DNA Charlie -284 102 20 3 617 718 321 55 42 chr17 4252513 4252897 -91019754 - MLT1D LTR MaLR -1 504 116 3 617 212 177 31 31 chr17 4252905 4252969 -91019682 + (CTATT)n Simple_repeat Simple_repeat 5 68 0 3 617 180 0 0 0 chr17 4253355 4253375 -91019276 + (TCCC)n Simple_repeat Simple_repeat 4 23 0 3 617 316 299 103 0 chr17 4253808 4253905 -91018746 + PB1D10 SINE Alu 1 107 -10 3 617 327 292 95 44 chr17 4254038 4254353 -91018298 + L1ME1 LINE L1 5694 6024 -155 3 617 466 269 33 66 chr17 4254381 4254532 -91018119 + RMER20B LTR ERVK 1 146 -481 3 617 4174 121 38 3 chr17 4254582 4255163 -91017488 + MT2B LTR ERVL 1 601 0 3 617 353 310 67 36 chr17 4255230 4255424 -91017227 + RMER20B LTR ERVK 317 516 0 3 617 3418 16 3 0 chr17 4255833 4256202 -91016449 + L1Md_F2 LINE L1 6212 6581 -1 3 617 860 269 39 39 chr17 4256480 4256712 -91015939 + B4A SINE B4 1 232 -60 3 617 222 258 16 0 chr17 4256713 4256775 -91015876 + B4A SINE B4 2 64 -228 4 617 315 274 35 113 chr17 4256830 4256945 -91015706 + B4A SINE B4 182 287 -5 4 617 430 302 139 61 chr17 4257043 4257388 -91015263 - MTE2a LTR MaLR -7 372 1 4 617 343 412 5 5 chr17 4257766 4257983 -91014668 + L1MEd LINE L1 485 701 -5418 4 617 549 268 8 52 chr17 4258313 4258447 -91014204 + RSINE1 SINE B4 2 129 -36 4 617 414 0 0 0 chr17 4258448 4258494 -91014157 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 617 297 0 0 0 chr17 4258494 4258526 -91014125 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 617 504 292 73 44 chr17 4258573 4258777 -91013874 + B3 SINE B2 1 210 -6 4 617 25 51 0 0 chr17 4258884 4258923 -91013728 + AT_rich Low_complexity Low_complexity 1 39 0 4 617 313 352 144 50 chr17 4259082 4259402 -91013249 - ORR1D2 LTR MaLR -3 367 18 4 617 2621 175 22 55 chr17 4259791 4260336 -91012315 + RLTR11A2 LTR ERVK 1 527 0 4 617 215 234 0 21 chr17 4260348 4260396 -91012255 + GA-rich Low_complexity Low_complexity 2 48 0 4 617 327 274 0 0 chr17 4260429 4260502 -91012149 + RSINE1 SINE B4 23 95 -70 4 617 23 0 0 0 chr17 4260610 4260633 -91012018 + AT_rich Low_complexity Low_complexity 1 23 0 4 617 427 196 28 7 chr17 4260937 4261081 -91011570 + GA-rich Low_complexity Low_complexity 1 147 0 4 617 10095 155 76 12 chr17 4261082 4262831 -91009820 - MurERV4-int LTR ERVK -3399 1861 1 4 617 2357 157 101 14 chr17 4262831 4263258 -91009393 - RMER4A LTR ERVK 0 466 3 4 617 904 294 58 59 chr17 4263341 4263681 -91008970 + MLT1A0 LTR MaLR 1 366 -24 4 617 610 305 98 37 chr17 4264135 4264854 -91007797 + L1MA5 LINE L1 5114 5918 -382 4 617 279 0 0 0 chr17 4265564 4265595 -91007056 + (A)n Simple_repeat Simple_repeat 1 31 0 4 617 213 140 53 0 chr17 4267761 4267818 -91004833 + (TA)n Simple_repeat Simple_repeat 2 61 0 4 617 400 224 214 46 chr17 4269494 4269625 -91003026 + MIR SINE MIR 9 161 -101 4 617 310 345 122 34 chr17 4270180 4270534 -91002117 + L1MEc LINE L1 50 434 -5966 4 617 30 45 0 0 chr17 4270826 4270870 -91001781 + AT_rich Low_complexity Low_complexity 1 44 0 4 617 653 301 88 13 chr17 4270924 4271163 -91001488 - RMER15 LTR ERVL -14 561 305 4 617 696 24 0 0 chr17 4271221 4271303 -91001348 + (TA)n Simple_repeat Simple_repeat 1 82 0 4 617 230 252 73 40 chr17 4271544 4271668 -91000983 - L1MEg LINE L1 -4915 1169 1042 4 617 337 272 182 23 chr17 4271837 4272266 -91000385 + L1MEc LINE L1 2803 3299 -3020 4 617 1036 128 6 6 chr17 4272272 4272452 -91000199 + (GGA)n Simple_repeat Simple_repeat 1 180 0 4 617 22 35 0 0 chr17 4272464 4272493 -91000158 + AT_rich Low_complexity Low_complexity 1 29 0 4 617 1194 210 142 6 chr17 4272545 4272900 -90999751 + RMER19B LTR ERVK 138 616 -286 4 617 772 56 56 0 chr17 4272948 4273055 -90999596 + BC1_Mm scRNA scRNA 2 114 -38 4 617 551 323 59 14 chr17 4273169 4273455 -90999196 + L1M5 LINE L1 3340 3638 -2508 4 617 319 305 37 0 chr17 4273604 4273686 -90998965 + PB1D7 SINE Alu 24 108 -12 4 617 583 276 67 41 chr17 4273915 4274183 -90998468 + L1MD LINE L1 3918 4192 -1954 4 617 1444 270 44 32 chr17 4274511 4275012 -90997639 - Lx8 LINE L1 0 7473 6967 4 617 350 101 14 0 chr17 4275043 4275112 -90997539 + (TTTTTG)n Simple_repeat Simple_repeat 2 71 0 4 617 24 32 0 0 chr17 4275178 4275209 -90997442 + AT_rich Low_complexity Low_complexity 1 31 0 4 617 1128 92 28 0 chr17 4275209 4275351 -90997300 - B1_Mus1 SINE Alu -2 146 1 4 617 531 47 11 34 chr17 4275390 4275478 -90997173 - L1Md_F2 LINE L1 -1 6581 6496 4 617 317 329 46 58 chr17 4275478 4275652 -90996999 + L1M5 LINE L1 4765 4936 -1210 4 617 234 0 0 0 chr17 4275687 4275713 -90996938 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 4 617 346 314 118 12 chr17 4275811 4275972 -90996679 + L2 LINE L2 2794 2971 -448 4 617 393 340 124 26 chr17 4276207 4276473 -90996178 + B4A SINE B4 1 292 0 4 617 347 235 28 47 chr17 4277399 4277506 -90995145 + L1M4c LINE L1 1205 1309 -5075 4 617 243 0 0 0 chr17 4277506 4277533 -90995118 + (GA)n Simple_repeat Simple_repeat 1 27 0 4 617 905 273 42 117 chr17 4277707 4278084 -90994567 - MTE2a LTR MaLR -28 351 3 4 617 405 0 0 0 chr17 4278223 4278268 -90994383 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 617 342 0 0 0 chr17 4279950 4279988 -90992663 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 617 560 295 69 79 chr17 4280043 4280422 -90992229 - L1MB3 LINE L1 -42 6141 5767 4 617 186 232 0 44 chr17 4280836 4280881 -90991770 - L2a LINE L2 -4 3422 3380 4 617 306 0 0 0 chr17 4280907 4280941 -90991710 + (TTA)n Simple_repeat Simple_repeat 1 34 0 4 617 21 57 0 0 chr17 4280951 4280986 -90991665 + AT_rich Low_complexity Low_complexity 1 35 0 4 617 354 23 0 0 chr17 4281310 4281353 -90991298 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 617 585 52 0 0 chr17 4282614 4282691 -90989960 + (TG)n Simple_repeat Simple_repeat 2 78 0 4 617 672 271 26 0 chr17 4282695 4282846 -90989805 - B3A SINE B2 -38 160 6 4 617 198 0 0 0 chr17 4283035 4283057 -90989594 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 4 617 1065 278 93 24 chr17 4283366 4283603 -90989048 + MTD LTR MaLR 18 262 -157 4 617 213 65 0 0 chr17 4283603 4283634 -90989017 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 617 1065 278 93 24 chr17 4283634 4283772 -90988879 + MTD LTR MaLR 263 419 0 4 617 261 0 0 0 chr17 4283829 4283858 -90988793 + (GA)n Simple_repeat Simple_repeat 1 29 0 4 617 410 294 141 65 chr17 4284562 4284654 -90987997 + B4A SINE B4 3 97 -195 4 617 324 0 0 0 chr17 4284654 4284690 -90987961 + (TC)n Simple_repeat Simple_repeat 1 36 0 4 617 216 0 0 0 chr17 4284690 4284713 -90987938 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 617 378 0 0 0 chr17 4284716 4284758 -90987893 + (GA)n Simple_repeat Simple_repeat 2 43 0 4 617 410 294 141 65 chr17 4284758 4284922 -90987729 + B4A SINE B4 98 283 -9 4 617 262 129 0 31 chr17 4284945 4285009 -90987642 + (CATA)n Simple_repeat Simple_repeat 1 62 0 4 617 28 0 0 0 chr17 4286096 4286124 -90986527 + AT_rich Low_complexity Low_complexity 1 28 0 4 617 614 290 62 39 chr17 4286187 4286492 -90986159 + MER33 DNA MER1_type 3 314 -10 4 617 476 300 177 12 chr17 4286635 4286884 -90985767 + B4A SINE B4 3 292 0 4 617 1149 82 0 20 chr17 4287133 4287146 -90985505 - B1_Mus1 SINE Alu -1 147 137 4 617 405 0 0 0 chr17 4287146 4287191 -90985460 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 4 617 1149 82 0 20 chr17 4287191 4287327 -90985324 - B1_Mus1 SINE Alu -12 136 1 4 617 535 261 41 21 chr17 4287337 4287482 -90985169 - B1F1 SINE Alu 0 149 2 4 617 1761 21 0 10 chr17 4287863 4288055 -90984596 - B2_Mm1a SINE B2 -2 191 2 4 617 198 0 0 0 chr17 4288090 4288112 -90984539 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 4 617 245 287 0 21 chr17 4288390 4288486 -90984165 + (TA)n Simple_repeat Simple_repeat 2 95 0 4 617 191 146 24 0 chr17 4288712 4288753 -90983898 + (TATG)n Simple_repeat Simple_repeat 2 43 0 4 617 708 299 82 79 chr17 4288802 4289082 -90983569 - B4A SINE B4 -1 291 11 4 617 1125 294 113 37 chr17 4289562 4290678 -90981973 - L1MB7 LINE L1 -84 6100 4891 4 617 1785 331 85 6 chr17 4290972 4291705 -90980946 - Lx8 LINE L1 -229 7244 6454 4 617 336 313 160 61 chr17 4292304 4292597 -90980054 + LTR16C LTR ERVL 75 396 -93 4 617 257 222 84 53 chr17 4293747 4293842 -90978809 + MLT1A1 LTR MaLR 290 387 -21 4 617 484 274 116 71 chr17 4296194 4296522 -90976129 + MTEa LTR MaLR 4 379 0 4 617 30 0 0 0 chr17 4297148 4297178 -90975473 + AT_rich Low_complexity Low_complexity 1 30 0 4 617 538 295 24 111 chr17 4298119 4298371 -90974280 + ORR1E LTR MaLR 25 254 -105 4 617 212 287 67 38 chr17 4299229 4299334 -90973317 + AmnSINE1 SINE SINE 87 194 -381 4 617 243 0 0 0 chr17 4299606 4299633 -90973018 + (TC)n Simple_repeat Simple_repeat 2 28 0 4 617 468 0 0 0 chr17 4299633 4299684 -90972967 + (TA)n Simple_repeat Simple_repeat 1 52 0 4 617 606 211 82 8 chr17 4299745 4299879 -90972772 + B1F SINE Alu 6 149 0 4 617 366 293 77 21 chr17 4300004 4300147 -90972504 + MIRb SINE MIR 86 236 -32 4 617 2282 101 65 3 chr17 4301871 4302179 -90970472 + ORR1A2 LTR MaLR 1 327 0 4 617 496 267 199 26 chr17 4303317 4303465 -90969186 - Lx9 LINE L1 -1 7643 7466 4 617 459 0 0 0 chr17 4303465 4303516 -90969135 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 4 617 496 267 199 26 chr17 4303516 4303678 -90968973 - Lx9 LINE L1 -179 7465 7280 4 617 683 279 87 0 chr17 4303681 4303864 -90968787 - B3 SINE B2 -17 199 1 4 617 290 326 88 33 chr17 4305290 4305443 -90967208 + MIR SINE MIR 18 179 -89 4 617 228 360 146 0 chr17 4305751 4305915 -90966736 + L2a LINE L2 1314 1501 -1918 4 617 1025 279 29 63 chr17 4305966 4306348 -90966303 - MTE2b LTR MaLR 0 379 11 4 617 264 386 67 16 chr17 4306414 4306669 -90965982 + L2a LINE L2 1665 1932 -1487 4 617 519 341 133 55 chr17 4306692 4307782 -90964869 + L2a LINE L2 2083 3266 -160 4 617 311 268 103 0 chr17 4307945 4308042 -90964609 + L2a LINE L2 3320 3426 0 4 617 214 310 42 14 chr17 4308237 4308309 -90964342 + MIRc SINE MIR 6 79 -189 4 617 459 0 0 0 chr17 4311119 4311170 -90961481 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 617 198 0 0 0 chr17 4311751 4311773 -90960878 + (A)n Simple_repeat Simple_repeat 1 22 0 4 617 237 317 31 54 chr17 4311852 4311982 -90960669 + Kanga1b DNA Tc2 229 355 -424 4 617 252 0 0 0 chr17 4312507 4312535 -90960116 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 617 1242 278 55 30 chr17 4313003 4313370 -90959281 - MTE2a LTR MaLR 0 379 4 4 617 306 290 79 16 chr17 4313644 4313770 -90958881 - L1M5 LINE L1 -716 5728 5595 4 617 504 327 154 81 chr17 4313886 4313939 -90958712 - MLT2B2 LTR ERVL -1 514 474 4 617 1048 73 27 17 chr17 4313939 4314232 -90958419 + (TAGA)n Simple_repeat Simple_repeat 1 295 0 4 617 504 327 154 81 chr17 4314232 4314656 -90957995 - MLT2B2 LTR ERVL -42 473 2 4 617 1107 321 76 16 chr17 4314656 4315383 -90957268 - L1MD LINE L1 -3054 3092 2315 5 617 1450 153 18 0 chr17 4315714 4315936 -90956715 - URR1A DNA MER1_type 0 226 1 5 617 688 251 48 16 chr17 4316264 4316450 -90956201 + B3A SINE B2 7 198 0 5 617 243 61 0 0 chr17 4318005 4318038 -90954613 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 617 384 356 74 0 chr17 4318172 4318307 -90954344 + RSINE1 SINE B4 3 147 -18 5 617 216 97 0 0 chr17 4318307 4318338 -90954313 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 617 285 341 16 16 chr17 4318702 4318827 -90953824 + MLT1A1 LTR MaLR 284 408 0 5 617 685 260 92 54 chr17 4319111 4319371 -90953280 + MER58B DNA MER1_type 69 338 -3 5 617 198 103 0 0 chr17 4320470 4320499 -90952152 + (A)n Simple_repeat Simple_repeat 1 29 0 5 617 227 258 16 0 chr17 4320727 4320789 -90951862 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 617 436 270 157 66 chr17 4320929 4321171 -90951480 + MLT1B LTR MaLR 30 293 -97 5 617 562 238 107 8 chr17 4322639 4322770 -90949881 + RSINE1 SINE B4 3 146 -19 5 617 261 0 0 0 chr17 4323008 4323037 -90949614 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 5 617 513 264 57 19 chr17 4323037 4323195 -90949456 - Tigger5 DNA MER2_type -4 2402 2239 5 617 381 336 129 103 chr17 4323246 4323518 -90949133 - Tigger5 DNA MER2_type -2107 299 21 5 617 521 272 54 30 chr17 4325180 4325347 -90947304 - Tigger5 DNA MER2_type -5 2401 2231 5 618 888 70 0 0 chr17 4326188 4326317 -90946334 + (TG)n Simple_repeat Simple_repeat 1 129 0 5 618 215 358 93 2 chr17 4327427 4327544 -90945107 - MIRb SINE MIR -125 143 16 5 618 240 122 0 0 chr17 4329966 4330007 -90942644 + (TTG)n Simple_repeat Simple_repeat 2 42 0 5 618 217 213 21 0 chr17 4330014 4330061 -90942590 - MER5B DNA MER1_type -130 48 1 5 618 5486 55 0 2 chr17 4330176 4330816 -90941835 - L1Md_F2 LINE L1 0 6582 5944 5 618 364 53 66 13 chr17 4332627 4332703 -90939948 + (TTTG)n Simple_repeat Simple_repeat 4 83 0 5 618 891 253 77 0 chr17 4332779 4332973 -90939678 + ID_B1 SINE B4 15 223 -1 5 618 252 0 0 0 chr17 4333520 4333548 -90939103 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 618 5036 97 18 67 chr17 4334749 4335598 -90937053 - RMER17D2 LTR ERVK -2 807 1 5 618 595 86 0 0 chr17 4335603 4335684 -90936967 + B1_Mm SINE Alu 67 147 0 5 618 657 265 0 14 chr17 4336299 4336437 -90936214 + RSINE1 SINE B4 5 140 -25 5 618 291 325 35 81 chr17 4337655 4337829 -90934822 + MER5B DNA MER1_type 1 166 -12 5 618 261 0 0 0 chr17 4337851 4337880 -90934771 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 618 373 286 62 57 chr17 4337905 4338098 -90934553 + MER33 DNA MER1_type 3 196 -128 5 618 35 24 0 0 chr17 4338137 4338179 -90934472 + AT_rich Low_complexity Low_complexity 1 42 0 5 618 917 262 78 19 chr17 4338293 4338561 -90934090 - B4A SINE B4 -7 285 2 5 618 243 318 83 9 chr17 4338724 4338832 -90933819 - PB1D9 SINE Alu 0 120 5 5 618 2979 38 0 131 chr17 4339737 4340157 -90932494 + RLTR10B2 LTR ERVK 1 365 0 5 618 225 211 0 0 chr17 4340191 4340243 -90932408 + GA-rich Low_complexity Low_complexity 2 53 0 5 618 225 88 0 29 chr17 4340250 4340285 -90932366 + (GAAA)n Simple_repeat Simple_repeat 1 34 0 5 618 862 175 6 6 chr17 4340285 4340370 -90932281 + polypurine Low_complexity Low_complexity 3 88 0 5 618 1163 101 0 16 chr17 4340370 4340552 -90932099 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 5 618 862 175 6 6 chr17 4340552 4340644 -90932007 + polypurine Low_complexity Low_complexity 89 180 0 5 618 212 340 61 20 chr17 4341073 4341172 -90931479 - MIRb SINE MIR -155 113 11 5 618 222 374 18 55 chr17 4341677 4341841 -90930810 - L3 LINE CR1 -3 4486 4329 5 618 40977 28 2 6 chr17 4342192 4348576 -90924075 - L1Md_A LINE L1 0 6582 232 5 618 533 273 33 125 chr17 4348943 4349127 -90923524 + B4A SINE B4 1 167 -125 5 618 224 0 106 21 chr17 4349751 4349798 -90922853 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 5 618 538 272 9 9 chr17 4349938 4350053 -90922598 + RSINE1 SINE B4 11 125 -40 5 618 22 35 0 0 chr17 4350168 4350197 -90922454 + AT_rich Low_complexity Low_complexity 1 29 0 5 618 391 291 0 0 chr17 4350236 4350339 -90922312 + B1F1 SINE Alu 45 147 -2 5 618 281 358 0 84 chr17 4351440 4351571 -90921080 + RMER15 LTR ERVL 348 467 -108 5 618 1009 279 8 20 chr17 4351749 4352100 -90920551 + L1MB3 LINE L1 5759 6105 -78 5 618 2238 74 0 0 chr17 4352168 4352478 -90920173 + L1_Mus1 LINE L1 6288 6567 0 5 618 249 344 174 40 chr17 4352490 4352714 -90919937 + B4 SINE B4 24 277 -15 5 618 399 68 0 0 chr17 4353485 4353544 -90919107 + (TC)n Simple_repeat Simple_repeat 1 59 0 5 618 473 317 228 13 chr17 4353982 4354214 -90918437 + B4A SINE B4 3 284 -8 5 618 185 94 31 0 chr17 4354218 4354250 -90918401 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 618 1820 222 30 16 chr17 4355070 4355485 -90917166 + MTD LTR MaLR 1 406 -13 5 618 538 269 149 60 chr17 4356329 4356578 -90916073 + B4 SINE B4 5 275 -17 5 618 534 343 89 31 chr17 4357557 4357816 -90914835 + B4 SINE B4 5 278 -14 5 618 423 0 0 0 chr17 4357851 4357898 -90914753 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 618 209 353 40 59 chr17 4358756 4359009 -90913642 - L2 LINE L2 -1540 1879 1632 5 618 654 58 0 0 chr17 4360212 4360299 -90912352 + (CA)n Simple_repeat Simple_repeat 2 88 0 5 618 22 35 0 0 chr17 4360630 4360659 -90911992 + AT_rich Low_complexity Low_complexity 1 29 0 5 618 270 231 25 13 chr17 4361294 4361373 -90911278 + CT-rich Low_complexity Low_complexity 3 82 0 5 618 314 220 0 35 chr17 4361409 4361522 -90911129 - Lx9 LINE L1 -4 7640 7532 5 618 621 197 31 8 chr17 4361540 4361668 -90910983 - Lx9 LINE L1 -171 7473 7343 5 618 940 245 22 22 chr17 4361686 4361957 -90910694 + Lx9 LINE L1 7005 7275 -369 5 618 304 375 73 7 chr17 4362145 4362282 -90910369 + ID_B1 SINE B4 1 146 -78 5 618 192 111 0 0 chr17 4362289 4362325 -90910326 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 618 339 309 104 55 chr17 4362396 4362598 -90910053 + MER20 DNA MER1_type 1 212 -7 5 618 245 271 11 105 chr17 4362824 4362919 -90909732 - L3b LINE CR1 -244 238 153 5 618 452 18 18 0 chr17 4363484 4363541 -90909110 + (TC)n Simple_repeat Simple_repeat 2 59 0 5 618 342 98 0 0 chr17 4363541 4363591 -90909060 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 618 435 19 0 0 chr17 4364159 4364211 -90908440 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 618 296 375 0 0 chr17 4364414 4364502 -90908149 + PB1D10 SINE Alu 9 96 -21 5 618 314 314 16 16 chr17 4364505 4364631 -90908020 + GA-rich Low_complexity Low_complexity 2 127 0 5 618 23 0 0 0 chr17 4365217 4365240 -90907411 + AT_rich Low_complexity Low_complexity 1 23 0 5 618 188 0 74 0 chr17 4365244 4365271 -90907380 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 5 618 1057 104 7 0 chr17 4365272 4365407 -90907244 - B1_Mus1 SINE Alu -12 136 1 5 618 222 231 0 0 chr17 4365647 4365712 -90906939 + GA-rich Low_complexity Low_complexity 2 66 0 5 618 558 0 0 0 chr17 4366927 4366989 -90905662 + (ATATG)n Simple_repeat Simple_repeat 2 63 0 5 618 360 265 12 104 chr17 4367227 4367391 -90905260 + L1VL1 LINE L1 245 393 -6029 5 618 438 247 19 39 chr17 4367497 4367653 -90904998 + L1_Mus1 LINE L1 674 826 -5790 5 618 30222 114 23 31 chr17 4367634 4371872 -90900779 + L1_Mus1 LINE L1 725 4934 -949 5 618 306 0 0 0 chr17 4371872 4371906 -90900745 + (TTA)n Simple_repeat Simple_repeat 3 36 0 5 618 30222 82 35 9 chr17 4371906 4373550 -90899101 + L1_Mus1 LINE L1 4935 6565 -2 5 618 29 28 0 0 chr17 4374012 4374048 -90898603 + AT_rich Low_complexity Low_complexity 1 36 0 5 618 486 238 81 16 chr17 4374054 4374178 -90898473 - MLT2B1 LTR ERVL -208 312 181 5 618 970 234 86 100 chr17 4374222 4374663 -90897988 - RLTR12B LTR ERVK -47 481 47 5 618 586 230 46 26 chr17 4374675 4374827 -90897824 - MLT2B1 LTR ERVL -357 163 9 5 618 475 259 38 0 chr17 4375088 4375219 -90897432 + L1MD LINE L1 2884 3019 -3127 5 618 548 289 61 30 chr17 4375219 4375510 -90897141 - L1M3 LINE L1 -517 5654 5303 5 618 421 267 121 53 chr17 4375596 4375975 -90896676 - L1MEf LINE L1 -5158 1042 638 5 618 1263 79 0 2 chr17 4376747 4377796 -90894855 + (CA)n Simple_repeat Simple_repeat 1 1047 0 5 618 259 319 60 54 chr17 4378254 4378420 -90894231 + MLT1A0 LTR MaLR 162 328 -37 5 618 340 294 67 20 chr17 4378459 4378608 -90894043 - L1MEf LINE L1 -6044 156 1 5 618 680 232 14 22 chr17 4379852 4379991 -90892660 + RSINE1 SINE B4 6 144 -21 5 618 22 0 0 0 chr17 4380047 4380069 -90892582 + AT_rich Low_complexity Low_complexity 1 22 0 5 618 205 176 0 0 chr17 4383006 4383040 -90889611 + GA-rich Low_complexity Low_complexity 3 36 0 5 618 1064 318 27 44 chr17 4383901 4384375 -90888276 + Lx9 LINE L1 6990 7455 -189 5 618 431 189 8 0 chr17 4384377 4384499 -90888152 + CT-rich Low_complexity Low_complexity 2 124 0 5 618 441 0 0 0 chr17 4384499 4384548 -90888103 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 618 253 298 121 24 chr17 4385260 4385384 -90887267 - MIR3 SINE MIR -50 158 23 5 618 209 303 182 53 chr17 4385565 4385812 -90886839 + L2a LINE L2 3074 3352 -74 5 618 2470 61 3 0 chr17 4386124 4386417 -90886234 - L1_Mus1 LINE L1 0 6567 6274 5 618 556 320 50 95 chr17 4388029 4388409 -90884242 - MLT1A0 LTR MaLR 0 365 3 5 618 29 0 0 0 chr17 4390547 4390576 -90882075 + AT_rich Low_complexity Low_complexity 1 29 0 5 618 24 0 0 0 chr17 4390697 4390721 -90881930 + AT_rich Low_complexity Low_complexity 1 24 0 5 618 315 0 0 0 chr17 4391742 4391777 -90880874 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 618 1829 279 29 48 chr17 4391867 4392527 -90880124 + Lx8 LINE L1 6826 7472 -1 6 618 278 392 76 17 chr17 4394418 4394654 -90877997 - LTR85b LTR Gypsy? -509 275 26 6 618 244 248 16 74 chr17 4394753 4394875 -90877776 + (CATATA)n Simple_repeat Simple_repeat 2 116 0 6 618 1258 180 0 94 chr17 4395033 4395278 -90877373 - URR1B DNA MER1_type 0 225 4 6 618 195 42 0 0 chr17 4395571 4395595 -90877056 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6 618 1193 58 0 7 chr17 4395599 4395739 -90876912 - B1_Mus1 SINE Alu -7 141 3 6 618 4563 74 7 19 chr17 4396802 4397397 -90875254 - L1VL2 LINE L1 -5474 861 274 6 618 2580 62 3 6 chr17 4397397 4397736 -90874915 - ORR1A0 LTR MaLR -8 338 1 6 618 757 78 0 10 chr17 4397739 4397843 -90874808 - L1VL2 LINE L1 -6058 277 175 6 618 693 0 0 0 chr17 4397843 4397920 -90874731 + (TC)n Simple_repeat Simple_repeat 2 78 0 6 618 352 276 42 25 chr17 4398230 4398349 -90874302 + MLT1C LTR MaLR 22 142 -325 6 618 2364 115 19 36 chr17 4398532 4398892 -90873759 - IAPEY2_LTR LTR ERVK -3 354 1 6 618 370 314 38 83 chr17 4399028 4399160 -90873491 + MTEa LTR MaLR 6 131 -248 6 618 3156 79 20 2 chr17 4399169 4399573 -90873078 - RLTR10A LTR ERVK 0 411 1 6 618 5051 98 8 17 chr17 4399573 4400292 -90872359 - RLTR10-int LTR ERVK -1 1986 1274 6 618 1805 182 43 83 chr17 4400336 4400862 -90871789 - RLTR10-int LTR ERVK -710 1277 983 6 618 1043 291 54 50 chr17 4400901 4401479 -90871172 - IAP-d-int LTR ERVK -1762 4780 4201 6 618 1128 282 59 45 chr17 4401674 4402329 -90870322 + IAP-d-int LTR ERVK 2139 3012 -4241 6 618 1137 309 19 17 chr17 4402342 4402825 -90869826 - MMERVK10C-int LTR ERVK -5789 1792 1309 6 618 995 126 50 39 chr17 4402987 4403168 -90869483 - MMERVK10C-int LTR ERVK -995 992 810 6 618 1087 92 0 0 chr17 4403611 4403752 -90868899 - MMERVK10C-int LTR ERVK -1511 476 336 6 618 697 303 36 60 chr17 4403754 4403789 -90868862 + MTEa LTR MaLR 104 140 -239 6 618 3257 67 20 2 chr17 4403789 4404193 -90868458 - RLTR10A LTR ERVK 0 411 1 6 618 697 303 36 60 chr17 4404193 4404438 -90868213 + MTEa LTR MaLR 141 377 -2 6 618 444 299 65 42 chr17 4404592 4404808 -90867843 + MIR SINE MIR 42 262 0 6 618 1320 73 0 0 chr17 4406159 4406336 -90866315 + (TCTCCC)n Simple_repeat Simple_repeat 3 179 0 6 618 390 116 11 44 chr17 4406336 4406426 -90866225 + CT-rich Low_complexity Low_complexity 4 90 0 6 618 1087 70 119 6 chr17 4406859 4407018 -90865633 - B2_Mm2 SINE B2 -18 177 1 6 618 605 267 75 0 chr17 4407728 4407889 -90864762 + ID_B1 SINE B4 6 178 -46 6 618 301 276 181 31 chr17 4408765 4408892 -90863759 - HAL1-3A_ME LINE L1 -421 2437 2292 6 618 676 224 0 16 chr17 4409547 4409729 -90862922 + GA-rich Low_complexity Low_complexity 2 180 0 6 618 576 0 0 0 chr17 4409736 4409800 -90862851 + (TAGA)n Simple_repeat Simple_repeat 2 65 0 6 618 979 130 0 0 chr17 4410485 4410616 -90862035 - B1_Mus1 SINE Alu -17 131 1 6 618 645 265 98 45 chr17 4410616 4410861 -90861790 + MER2 DNA MER2_type 88 345 0 6 618 449 350 0 28 chr17 4411705 4411846 -90860805 - B1F SINE Alu -8 141 5 6 618 388 346 94 33 chr17 4411846 4412580 -90860071 + L1M5 LINE L1 4433 5211 -935 6 618 183 225 41 12 chr17 4412599 4412770 -90859881 + (TAGA)n Simple_repeat Simple_repeat 1 176 0 6 618 276 53 0 0 chr17 4412756 4412794 -90859857 + (GA)n Simple_repeat Simple_repeat 1 38 0 6 618 1197 273 60 46 chr17 4412922 4413337 -90859314 + RMER5 LTR ERV1 114 534 0 6 618 244 326 33 0 chr17 4414421 4414513 -90858138 + (CA)n Simple_repeat Simple_repeat 2 96 0 6 618 2153 279 59 15 chr17 4415120 4415627 -90857024 - L1MA9 LINE L1 -3 6309 5780 6 618 348 77 0 0 chr17 4415627 4415679 -90856972 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 618 2153 279 59 15 chr17 4415679 4415917 -90856734 - L1MA9 LINE L1 -533 5779 5531 6 618 1896 284 77 18 chr17 4416389 4417468 -90855183 - L1MA9 LINE L1 -774 5538 4386 6 618 360 0 0 0 chr17 4417550 4417590 -90855061 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 618 1019 295 18 14 chr17 4418355 4418640 -90854011 + B4 SINE B4 1 286 -6 6 618 300 53 0 0 chr17 4418655 4418693 -90853958 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 6 618 348 282 20 103 chr17 4421029 4421041 -90851610 - B1F1 SINE Alu -1 148 116 6 618 376 247 0 79 chr17 4421041 4421142 -90851509 - ID_B1 SINE B4 -10 214 122 6 618 348 282 20 103 chr17 4421142 4421175 -90851476 - B1F1 SINE Alu -1 115 15 6 618 229 284 10 69 chr17 4421374 4421476 -90851175 + L2c LINE L2 3292 3387 0 6 618 197 248 143 98 chr17 4422343 4422455 -90850196 - L2a LINE L2 -23 3403 3287 6 618 402 310 71 0 chr17 4422797 4422952 -90849699 - MER117 DNA MER1_type -31 166 1 6 618 365 214 43 12 chr17 4423075 4423287 -90849364 + (TA)n Simple_repeat Simple_repeat 1 218 0 6 618 232 143 53 32 chr17 4423302 4423396 -90849255 + (TA)n Simple_repeat Simple_repeat 1 96 0 6 618 330 67 22 0 chr17 4423827 4423872 -90848779 - HAL1-3A_ME LINE L1 -839 2019 1974 6 618 211 206 0 40 chr17 4423873 4423949 -90848702 + (TATATG)n Simple_repeat Simple_repeat 6 78 0 6 618 370 232 17 22 chr17 4423954 4424135 -90848516 + (TATG)n Simple_repeat Simple_repeat 1 180 0 6 618 208 259 0 17 chr17 4424145 4424204 -90848447 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 6 618 664 202 0 22 chr17 4424205 4424387 -90848264 + (TATG)n Simple_repeat Simple_repeat 2 179 0 6 618 206 228 35 0 chr17 4424388 4424445 -90848206 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 6 618 2412 98 35 0 chr17 4425999 4426315 -90846336 + ORR1A2 LTR MaLR 1 327 0 6 618 198 0 0 0 chr17 4427069 4427091 -90845560 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 6 618 1162 70 0 14 chr17 4427091 4427226 -90845425 - B1_Mus2 SINE Alu -12 135 1 6 618 404 284 142 95 chr17 4427341 4427614 -90845037 - L1MC4 LINE L1 -3687 2528 2251 6 618 713 207 44 7 chr17 4427614 4427750 -90844901 - B1_Mur2 SINE Alu -7 142 2 6 618 404 284 142 95 chr17 4427750 4427970 -90844681 - L1MC4 LINE L1 -3965 2250 2012 6 618 365 316 152 54 chr17 4428091 4428499 -90844152 - L1MC4 LINE L1 -4201 2014 1567 6 618 254 324 14 0 chr17 4428567 4428641 -90844010 - MLT1A1 LTR MaLR -46 362 288 6 618 1667 292 67 57 chr17 4428808 4429655 -90842996 - L1MA5A LINE L1 -874 5269 4414 6 618 1897 286 44 20 chr17 4429652 4430337 -90842314 + L1MA5A LINE L1 5310 6010 -287 6 618 228 302 157 16 chr17 4430472 4430593 -90842058 - MLT1A1 LTR MaLR -270 138 1 6 618 573 15 0 0 chr17 4430603 4430669 -90841982 + (TC)n Simple_repeat Simple_repeat 1 66 0 6 618 198 0 0 0 chr17 4430669 4430690 -90841961 + (CA)n Simple_repeat Simple_repeat 1 22 0 6 618 306 0 0 0 chr17 4431296 4431330 -90841321 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 618 775 209 111 0 chr17 4431673 4431826 -90840825 + B3 SINE B2 27 196 -20 6 618 287 308 22 30 chr17 4432064 4432198 -90840453 + L1MD LINE L1 4403 4535 -1611 6 618 424 264 60 169 chr17 4432212 4432526 -90840125 + B4A SINE B4 1 280 -12 6 618 275 104 21 0 chr17 4432540 4432588 -90840063 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 618 1207 81 0 0 chr17 4433231 4433379 -90839272 + B1_Mus1 SINE Alu 1 148 0 6 618 228 283 19 19 chr17 4435170 4435278 -90837373 + (CATA)n Simple_repeat Simple_repeat 3 110 0 6 618 382 315 166 32 chr17 4435553 4435777 -90836874 - MER2 DNA MER2_type -4 341 88 6 618 1677 120 0 13 chr17 4436161 4436389 -90836262 - URR1B DNA MER1_type 0 225 1 6 618 615 348 61 11 chr17 4436451 4436713 -90835938 + Tigger5 DNA MER2_type 7 281 -2125 6 618 370 209 11 75 chr17 4436717 4436810 -90835841 + Tigger5 DNA MER2_type 2192 2278 -128 6 618 2503 58 3 0 chr17 4436826 4437136 -90835515 + L1_Mm LINE L1 4823 5133 -750 6 618 497 270 113 99 chr17 4437168 4437821 -90834830 + L1M5 LINE L1 2732 3393 -2753 6 618 263 295 0 0 chr17 4438422 4438483 -90834168 + B4 SINE B4 88 148 -144 6 618 23 33 0 0 chr17 4438717 4438747 -90833904 + AT_rich Low_complexity Low_complexity 1 30 0 6 618 85 77 0 0 chr17 4438926 4439109 -90833542 + AT_rich Low_complexity Low_complexity 1 183 0 6 618 280 266 102 8 chr17 4439976 4440110 -90832541 - L1MA4 LINE L1 -326 5977 5831 6 618 541 296 50 65 chr17 4440131 4440330 -90832321 - B3A SINE B2 -2 196 1 6 618 1665 172 89 29 chr17 4440399 4440747 -90831904 - ORR1D1 LTR MaLR -4 370 2 6 618 588 40 0 0 chr17 4440754 4440829 -90831822 + (GGAA)n Simple_repeat Simple_repeat 1 75 0 6 618 509 167 0 10 chr17 4440844 4440947 -90831704 + GA-rich Low_complexity Low_complexity 3 104 0 6 618 270 306 36 7 chr17 4440986 4441124 -90831527 + L1M1 LINE L1 5634 5775 -528 6 618 252 0 0 0 chr17 4443867 4443895 -90828756 + (A)n Simple_repeat Simple_repeat 1 28 0 6 618 1234 242 94 42 chr17 4444234 4444766 -90827885 + MT2B LTR ERVL 1 554 -47 6 618 232 136 30 0 chr17 4444829 4444895 -90827756 - MT2B LTR ERVL 0 533 466 6 618 759 224 136 48 chr17 4444918 4445399 -90827252 - MT2B LTR ERVL -58 543 12 6 618 2036 143 51 14 chr17 4445591 4445945 -90826706 - ORR1B2 LTR MaLR 0 367 1 6 618 2212 202 121 43 chr17 4447239 4448013 -90824638 - RMER19B LTR ERVK -12 890 1 6 618 341 232 10 33 chr17 4448210 4448320 -90824331 + B1F SINE Alu 7 114 -6 6 618 262 257 19 0 chr17 4448320 4448425 -90824226 + GA-rich Low_complexity Low_complexity 2 108 0 6 618 8896 126 15 7 chr17 4448465 4449844 -90822807 - Lx LINE L1 -17 5866 4477 6 618 4460 136 64 12 chr17 4449844 4450297 -90822354 + Lx LINE L1 5873 6330 -324 6 618 423 0 0 0 chr17 4450297 4450344 -90822307 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 618 4460 136 64 12 chr17 4450344 4450628 -90822023 + Lx LINE L1 6331 6646 -8 6 618 342 318 70 45 chr17 4450914 4451115 -90821536 - MT2A LTR ERVL -5 528 323 6 618 2308 54 7 3 chr17 4451464 4451759 -90820892 + L1Md_F3 LINE L1 6289 6584 0 6 618 272 265 109 32 chr17 4451923 4452079 -90820572 + L1M5 LINE L1 2213 2380 -3766 6 618 796 218 119 0 chr17 4452892 4453085 -90819566 + B3 SINE B2 1 216 0 6 618 404 238 24 39 chr17 4453260 4453387 -90819264 + CT-rich Low_complexity Low_complexity 6 130 0 6 618 492 280 126 50 chr17 4453695 4453973 -90818678 + Lx8 LINE L1 7173 7471 -2 6 618 257 252 67 61 chr17 4454057 4454222 -90818429 + L1M5 LINE L1 3862 4027 -2119 6 618 28 71 0 0 chr17 4454312 4454368 -90818283 + AT_rich Low_complexity Low_complexity 1 56 0 6 618 280 260 73 44 chr17 4454516 4454653 -90817998 - L1M6 LINE L1 -4898 1598 1458 6 618 537 321 96 69 chr17 4455105 4455760 -90816891 + Charlie7 DNA MER1_type 1316 1988 -624 6 618 210 143 37 61 chr17 4455826 4455908 -90816743 + (TA)n Simple_repeat Simple_repeat 1 80 0 7 618 399 154 13 0 chr17 4456078 4456156 -90816495 + Lx7 LINE L1 7614 7692 -4 7 619 580 324 47 82 chr17 4457068 4457471 -90815180 + MLT1B LTR MaLR 1 389 -1 7 619 649 309 12 0 chr17 4458104 4458266 -90814385 + B4A SINE B4 122 285 -7 7 619 214 366 0 0 chr17 4458282 4458364 -90814287 + (CA)n Simple_repeat Simple_repeat 1 82 0 7 619 246 176 0 0 chr17 4458958 4459009 -90813642 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 619 302 43 0 0 chr17 4460483 4460529 -90812122 - L1Md_T LINE L1 0 6582 6537 7 619 687 309 94 17 chr17 4460798 4461160 -90811491 - MLT1A1-int LTR MaLR -922 567 178 7 619 320 270 94 8 chr17 4461264 4461391 -90811260 - MLT1A1 LTR MaLR -3 557 420 7 619 433 248 58 70 chr17 4461461 4461617 -90811034 + L1MD3 LINE L1 6820 6973 -1022 7 619 427 314 105 43 chr17 4461626 4461997 -90810654 - MLT1A1 LTR MaLR -12 396 1 7 619 239 244 38 75 chr17 4461999 4462132 -90810519 + L1MD3 LINE L1 6977 7104 -778 7 619 1373 310 65 20 chr17 4462284 4462887 -90809764 + Lx8 LINE L1 6842 7471 -2 7 619 391 325 103 9 chr17 4463541 4463755 -90808896 + L1MD3 LINE L1 7346 7579 -416 7 619 344 203 11 28 chr17 4463968 4464150 -90808501 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 7 619 315 269 0 13 chr17 4464337 4464416 -90808235 + MTEa LTR MaLR 287 364 -15 7 619 529 278 123 23 chr17 4464439 4464700 -90807951 + L1MC4a LINE L1 7478 7764 -118 7 619 549 295 140 0 chr17 4465278 4465471 -90807180 - ID_B1 SINE B4 -4 220 1 7 619 438 53 0 0 chr17 4467142 4467199 -90805452 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 619 344 313 12 104 chr17 4467209 4467373 -90805278 - B3A SINE B2 -49 149 1 7 619 218 81 0 26 chr17 4467642 4467680 -90804971 + (TTAA)n Simple_repeat Simple_repeat 1 37 0 7 619 938 291 51 36 chr17 4467974 4468330 -90804321 - Lx8 LINE L1 0 7473 7113 7 619 582 103 0 0 chr17 4468931 4469018 -90803633 + (TC)n Simple_repeat Simple_repeat 2 88 0 7 619 852 127 0 0 chr17 4469188 4469330 -90803321 + (GAAA)n Simple_repeat Simple_repeat 3 144 0 7 619 219 280 108 0 chr17 4470205 4470298 -90802353 + MIRc SINE MIR 20 122 -146 7 619 771 171 7 33 chr17 4470762 4470913 -90801738 - B1_Mur3 SINE Alu -1 148 2 7 619 246 304 281 52 chr17 4471920 4472134 -90800517 + B4 SINE B4 1 263 -29 7 619 198 167 0 0 chr17 4472182 4472218 -90800433 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 619 350 239 11 11 chr17 4472222 4472400 -90800251 + GA-rich Low_complexity Low_complexity 1 178 0 7 619 250 100 0 57 chr17 4472425 4472478 -90800173 + G-rich Low_complexity Low_complexity 1 50 0 7 619 33 0 0 0 chr17 4473664 4473697 -90798954 + AT_rich Low_complexity Low_complexity 1 33 0 7 619 312 340 77 36 chr17 4475178 4475425 -90797226 + MLT1A LTR MaLR 117 373 -1 7 619 346 252 35 26 chr17 4476134 4476248 -90796403 + Lx9 LINE L1 5779 5893 -1751 7 619 758 291 24 70 chr17 4476510 4476788 -90795863 - MTE2a LTR MaLR -17 362 100 7 619 258 279 12 12 chr17 4476997 4477077 -90795574 - L4 LINE RTE -187 1842 1763 7 619 775 253 114 20 chr17 4477798 4478044 -90794607 + B4 SINE B4 1 269 -23 7 619 528 56 0 0 chr17 4478059 4478131 -90794520 + (CA)n Simple_repeat Simple_repeat 1 72 0 7 619 218 339 89 0 chr17 4478157 4478269 -90794382 + MIRb SINE MIR 24 145 -123 7 619 525 245 88 0 chr17 4478645 4478716 -90793935 + RSINE1 SINE B4 2 73 -92 7 619 360 0 0 0 chr17 4478716 4478756 -90793895 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 619 525 245 88 0 chr17 4478756 4478831 -90793820 + RSINE1 SINE B4 74 159 -6 7 619 27 62 0 0 chr17 4478845 4478893 -90793758 + AT_rich Low_complexity Low_complexity 1 48 0 7 619 204 67 0 0 chr17 4478990 4479020 -90793631 + (TA)n Simple_repeat Simple_repeat 2 31 0 7 619 369 0 0 0 chr17 4479021 4479062 -90793589 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 619 861 237 5 57 chr17 4480765 4480975 -90791676 - Lx8 LINE L1 -346 7127 6929 7 619 373 189 21 34 chr17 4481089 4481333 -90791318 + GA-rich Low_complexity Low_complexity 1 240 0 7 619 195 129 0 0 chr17 4482322 4482353 -90790298 + (CAGA)n Simple_repeat Simple_repeat 3 33 0 7 619 229 321 105 63 chr17 4482609 4482752 -90789899 + MLT1I LTR MaLR 251 399 -12 7 619 1997 137 10 62 chr17 4484596 4484985 -90787666 - RMER10B LTR ERVL -28 370 2 7 619 1435 124 37 0 chr17 4485480 4485698 -90786953 + URR1A DNA MER1_type 1 226 0 7 619 828 30 0 0 chr17 4485713 4485812 -90786839 + (CA)n Simple_repeat Simple_repeat 1 99 0 7 619 449 317 60 26 chr17 4486140 4486409 -90786242 + B4A SINE B4 1 278 -14 7 619 533 124 10 0 chr17 4486669 4486766 -90785885 + (TG)n Simple_repeat Simple_repeat 1 98 0 7 619 243 278 0 0 chr17 4486737 4486863 -90785788 + (TA)n Simple_repeat Simple_repeat 2 127 0 7 619 1806 79 1 0 chr17 4487692 4487931 -90784720 - L1_Mus1 LINE L1 -233 6334 6121 7 619 1940 48 0 0 chr17 4487931 4488162 -90784489 + L1_Mus1 LINE L1 6336 6566 -1 7 619 486 114 0 0 chr17 4488762 4488841 -90783810 + (GGAA)n Simple_repeat Simple_repeat 3 81 0 7 619 399 211 39 165 chr17 4489390 4489539 -90783112 + Lx9 LINE L1 7406 7525 -119 7 619 513 47 0 0 chr17 4489539 4489603 -90783048 + (TG)n Simple_repeat Simple_repeat 2 65 0 7 619 399 211 39 165 chr17 4489603 4489708 -90782943 + Lx9 LINE L1 7526 7628 -16 7 619 368 334 62 119 chr17 4490054 4490424 -90782227 + ORR1E LTR MaLR 11 359 0 7 619 22 56 0 0 chr17 4490552 4490588 -90782063 + AT_rich Low_complexity Low_complexity 1 36 0 7 619 505 287 47 0 chr17 4492517 4492646 -90780005 - RSINE1 SINE B4 -19 146 12 7 619 861 257 24 66 chr17 4495368 4495655 -90776996 - B4A SINE B4 -8 284 10 7 619 377 298 104 27 chr17 4495660 4495919 -90776732 - L1MC LINE L1 -575 5604 5326 7 619 342 303 111 26 chr17 4496233 4496551 -90776100 - L1MC LINE L1 -813 5333 4989 7 619 228 265 12 24 chr17 4496868 4496953 -90775698 + MLT1A1 LTR MaLR 313 396 -12 7 619 317 319 87 16 chr17 4497256 4497441 -90775210 + HAL1 LINE L1 2004 2201 -306 7 619 231 279 12 25 chr17 4497550 4497631 -90775020 + ID4 SINE ID 2 81 -2 7 619 234 276 26 26 chr17 4498976 4499054 -90773597 + RSINE1 SINE B4 2 79 -86 7 619 894 88 0 0 chr17 4499184 4499309 -90773342 + (CA)n Simple_repeat Simple_repeat 2 126 0 7 619 912 101 0 0 chr17 4499373 4499511 -90773140 + (TC)n Simple_repeat Simple_repeat 1 138 0 7 619 471 293 35 58 chr17 4499663 4499837 -90772814 + B4A SINE B4 105 274 -18 7 619 4534 142 29 10 chr17 4500953 4501676 -90770975 - RMER19A LTR ERVK 0 737 1 1 619 791 135 24 0 chr17 4502873 4502999 -90769652 - B2_Mm2 SINE B2 -65 130 2 2 619 1047 226 147 81 chr17 4503133 4503480 -90769171 - ORR1D2 LTR MaLR 0 370 1 3 619 328 259 183 0 chr17 4503480 4503611 -90769040 - ID_B1 SINE B4 -69 155 1 4 619 305 214 0 63 chr17 4504126 4504322 -90768329 + (CTCA)n Simple_repeat Simple_repeat 1 183 0 5 619 475 334 100 47 chr17 4505882 4506316 -90766335 + MLT1E1A LTR MaLR 104 548 -132 6 619 465 301 29 14 chr17 4506455 4506593 -90766058 + ID_B1 SINE B4 2 141 -83 7 619 1300 55 0 22 chr17 4506633 4506817 -90765834 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 8 619 1540 0 0 11 chr17 4506835 4507017 -90765634 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 9 619 190 182 0 0 chr17 4507391 4507424 -90765227 + L2a LINE L2 3379 3411 -15 1 619 186 128 0 0 chr17 4508128 4508167 -90764484 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 619 917 133 0 11 chr17 4508251 4508433 -90764218 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 619 707 297 0 6 chr17 4509439 4509615 -90763036 + B4 SINE B4 22 196 -96 1 619 900 127 0 0 chr17 4509626 4509752 -90762899 + L1VL1 LINE L1 61 186 -6236 1 619 16679 98 16 13 chr17 4509754 4512157 -90760494 + L1_Mus1 LINE L1 2970 5370 -1197 1 619 944 55 8 0 chr17 4512157 4512284 -90760367 - B1_Mus1 SINE Alu 0 148 21 1 619 16679 98 16 13 chr17 4512284 4513480 -90759171 + L1_Mus1 LINE L1 5371 6567 0 1 619 253 250 101 30 chr17 4513503 4513602 -90759049 + B4 SINE B4 186 291 -1 1 619 6758 126 12 17 chr17 4513664 4514955 -90757696 - Lx2 LINE L1 -402 6595 5307 1 619 357 318 0 0 chr17 4514955 4515043 -90757608 - B4 SINE B4 -43 249 162 1 619 379 201 30 0 chr17 4515100 4515269 -90757382 + (CA)n Simple_repeat Simple_repeat 2 175 0 1 619 464 204 17 6 chr17 4515298 4515475 -90757176 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 619 612 148 29 6 chr17 4515494 4515664 -90756987 + (CA)n Simple_repeat Simple_repeat 2 175 0 1 619 232 306 26 53 chr17 4515758 4515872 -90756779 + MER103 DNA DNA 56 166 0 2 619 425 264 85 30 chr17 4516563 4516762 -90755889 + Kanga1a DNA Tc2 541 750 -4 2 619 423 0 0 0 chr17 4517764 4517811 -90754840 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 619 308 229 22 30 chr17 4517971 4518106 -90754545 + CT-rich Low_complexity Low_complexity 5 138 0 2 619 243 170 0 0 chr17 4518448 4518495 -90754156 + (CAT)n Simple_repeat Simple_repeat 3 49 0 2 619 288 0 0 0 chr17 4518560 4518592 -90754059 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 619 237 211 0 0 chr17 4519527 4519579 -90753072 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 619 341 235 29 43 chr17 4519600 4519738 -90752913 + (TATATG)n Simple_repeat Simple_repeat 3 138 0 2 619 591 341 58 18 chr17 4519738 4520016 -90752635 - B4A SINE B4 0 292 4 2 619 219 284 12 47 chr17 4520651 4520679 -90751972 + (CATATA)n Simple_repeat Simple_repeat 2 30 0 2 619 198 0 0 0 chr17 4520679 4520701 -90751950 + (TG)n Simple_repeat Simple_repeat 1 22 0 3 619 219 284 12 47 chr17 4520701 4520757 -90751894 + (CATATA)n Simple_repeat Simple_repeat 1 53 0 3 619 260 321 48 36 chr17 4521034 4521202 -90751449 + Charlie14a DNA MER1_type 488 657 -507 3 619 347 41 20 0 chr17 4521273 4521322 -90751329 + (GA)n Simple_repeat Simple_repeat 2 51 0 3 619 475 216 45 0 chr17 4521561 4521695 -90750956 + Charlie14a DNA MER1_type 994 1133 -31 3 619 534 273 84 0 chr17 4521707 4521850 -90750801 + RSINE1 SINE B4 3 157 -8 3 619 617 320 10 19 chr17 4521984 4522191 -90750460 + L1MCa LINE L1 1 205 -6303 3 619 482 114 0 12 chr17 4522314 4522394 -90750257 + (AGGGGG)n Simple_repeat Simple_repeat 2 80 0 3 619 457 126 35 0 chr17 4522439 4522526 -90750125 + G-rich Low_complexity Low_complexity 2 91 0 3 619 25 0 0 0 chr17 4522534 4522559 -90750092 + AT_rich Low_complexity Low_complexity 1 25 0 3 619 299 279 211 0 chr17 4522673 4522820 -90749831 + L1MCa LINE L1 748 925 -5583 3 619 577 268 127 52 chr17 4522850 4523157 -90749494 + MLT1A0 LTR MaLR 27 356 -9 3 619 362 200 0 0 chr17 4523162 4523232 -90749419 + L1MCa LINE L1 919 988 -5520 3 619 207 0 0 0 chr17 4523397 4523420 -90749231 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 619 255 252 92 23 chr17 4523433 4523563 -90749088 + L1MCa LINE L1 1234 1372 -5136 3 619 180 0 0 0 chr17 4524003 4524023 -90748628 + (T)n Simple_repeat Simple_repeat 1 20 0 4 619 380 287 57 120 chr17 4524040 4524389 -90748262 + L1MCa LINE L1 1412 1738 -4770 3 619 203 359 13 0 chr17 4524389 4524467 -90748184 + GA-rich Low_complexity Low_complexity 2 80 0 4 619 2920 65 44 3 chr17 4524568 4524952 -90747699 + MTB LTR MaLR 1 400 0 4 619 243 289 140 62 chr17 4525030 4525273 -90747378 + L1MCa LINE L1 1985 2246 -4262 3 619 667 284 5 63 chr17 4525273 4525481 -90747170 + B3A SINE B2 19 203 -13 4 619 522 210 0 0 chr17 4525490 4525609 -90747042 + (TA)n Simple_repeat Simple_repeat 1 119 0 4 619 1037 282 127 52 chr17 4525674 4525820 -90746831 + L1MCa LINE L1 2303 2440 -3881 3 619 4219 30 0 6 chr17 4525820 4526315 -90746336 + L1Md_F2 LINE L1 6091 6582 0 4 619 1037 282 127 52 chr17 4526315 4526900 -90745751 + L1MCa LINE L1 2441 3089 -3232 3 619 257 232 140 10 chr17 4526955 4527055 -90745596 + Lx8 LINE L1 7354 7466 -7 4 619 721 196 0 8 chr17 4527079 4527213 -90745438 + B1_Mus1 SINE Alu 1 133 -15 4 619 207 0 0 0 chr17 4527236 4527259 -90745392 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 619 315 270 360 0 chr17 4527273 4527384 -90745267 - RSINE1 SINE B4 -13 152 2 5 619 279 252 59 20 chr17 4527411 4527512 -90745139 + L1M5 LINE L1 2944 3048 -3098 5 619 390 241 137 21 chr17 4527763 4527830 -90744821 + L1MCa LINE L1 3264 3334 -2987 3 619 186 43 0 0 chr17 4527830 4527853 -90744798 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 5 619 390 241 137 21 chr17 4527853 4528018 -90744633 + L1MCa LINE L1 3335 3522 -2799 3 619 314 198 44 55 chr17 4528074 4528165 -90744486 - B1F SINE Alu -29 120 31 5 619 665 319 141 44 chr17 4528166 4528828 -90743823 + L1MC1 LINE L1 5585 6310 -23 5 619 459 323 166 21 chr17 4528956 4529336 -90743315 - MLT1C LTR MaLR -1 466 32 5 619 234 0 0 0 chr17 4530132 4530158 -90742493 + (CCCCCA)n Simple_repeat Simple_repeat 1 26 0 5 619 207 0 0 0 chr17 4530372 4530395 -90742256 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 5 619 186 191 0 0 chr17 4530527 4530569 -90742082 + T-rich Low_complexity Low_complexity 1 42 0 5 619 589 237 111 68 chr17 4530845 4531035 -90741616 - B3A SINE B2 0 198 1 5 619 298 315 138 51 chr17 4531159 4531413 -90741238 + B4A SINE B4 3 278 -14 6 619 579 282 25 85 chr17 4533329 4533565 -90739086 + B4 SINE B4 1 222 -70 6 619 390 226 125 19 chr17 4533751 4533855 -90738796 + PB1D10 SINE Alu 2 116 -1 6 619 183 319 41 62 chr17 4534570 4534667 -90737984 - MER5A DNA MER1_type -1 188 94 6 619 3068 78 5 10 chr17 4534699 4535101 -90737550 - MTB LTR MaLR 0 400 1 6 619 632 289 124 29 chr17 4535656 4535898 -90736753 + B4A SINE B4 8 272 -20 6 619 228 250 33 0 chr17 4535918 4535978 -90736673 + CT-rich Low_complexity Low_complexity 1 62 0 6 619 22 0 0 0 chr17 4536014 4536036 -90736615 + AT_rich Low_complexity Low_complexity 1 22 0 6 619 313 302 46 81 chr17 4536427 4536600 -90736051 - MLT1H LTR MaLR 0 549 383 6 619 1379 33 0 11 chr17 4536854 4537036 -90735615 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 6 619 1354 35 34 17 chr17 4537056 4537409 -90735242 + (GGAGAA)n Simple_repeat Simple_repeat 1 359 0 6 619 2130 287 123 33 chr17 4537660 4538911 -90733740 - Charlie1a DNA MER1_type -61 1394 31 7 619 189 0 0 0 chr17 4539333 4539354 -90733297 + (GA)n Simple_repeat Simple_repeat 2 22 0 7 619 223 254 0 16 chr17 4539512 4539576 -90733075 + (CA)n Simple_repeat Simple_repeat 1 63 0 7 619 231 228 53 22 chr17 4540032 4540107 -90732544 + MER5A DNA MER1_type 47 117 -72 7 619 206 161 22 33 chr17 4540384 4540474 -90732177 + T-rich Low_complexity Low_complexity 3 91 0 7 619 35 41 0 0 chr17 4540499 4540548 -90732103 + AT_rich Low_complexity Low_complexity 1 49 0 7 619 310 229 22 26 chr17 4540584 4540676 -90731975 - RSINE1 SINE B4 -194 98 4 7 619 285 29 0 0 chr17 4541533 4541567 -90731084 + (CTGTG)n Simple_repeat Simple_repeat 1 34 0 7 619 267 31 0 0 chr17 4541747 4541779 -90730872 + (GA)n Simple_repeat Simple_repeat 2 33 0 7 619 2445 268 58 62 chr17 4542927 4544005 -90728646 + L1_Rod LINE L1 3754 4826 -1021 7 619 909 297 100 50 chr17 4544117 4544758 -90727893 - L1MC LINE L1 -1424 4722 4050 8 619 216 0 0 0 chr17 4544759 4544783 -90727868 + (TCTG)n Simple_repeat Simple_repeat 1 24 0 8 619 198 0 0 0 chr17 4544785 4544807 -90727844 + (TC)n Simple_repeat Simple_repeat 1 22 0 8 619 516 32 0 0 chr17 4544807 4544868 -90727783 + (CA)n Simple_repeat Simple_repeat 1 62 0 8 619 279 0 0 0 chr17 4545035 4545066 -90727585 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 619 389 259 100 143 chr17 4545068 4545438 -90727213 + MLT1B LTR MaLR 37 390 0 8 619 2764 121 5 12 chr17 4547008 4547418 -90725233 + MTB_Mm LTR MaLR 1 407 0 8 619 295 273 87 67 chr17 4547612 4547761 -90724890 - MER5A1 DNA MER1_type -14 152 1 8 619 287 304 0 12 chr17 4547946 4548026 -90724625 + (CA)n Simple_repeat Simple_repeat 2 80 0 8 619 280 282 8 57 chr17 4549242 4549366 -90723285 + Lx8 LINE L1 7356 7473 0 8 619 235 249 112 102 chr17 4549726 4549941 -90722710 + Lx8 LINE L1 7248 7464 -9 9 619 551 234 7 14 chr17 4550448 4550587 -90722064 - B1F1 SINE Alu 0 149 12 9 619 303 325 107 48 chr17 4550737 4550905 -90721746 + MER5B DNA MER1_type 1 178 0 9 619 2148 48 11 7 chr17 4551677 4551947 -90720704 + L1Md_F3 LINE L1 6313 6583 -1 9 619 2393 106 169 31 chr17 4552997 4553453 -90719198 + MURVY-LTR LTR ERV1 1 519 0 9 619 2102 77 3 66 chr17 4553905 4554210 -90718441 + L1_Mus2 LINE L1 6281 6566 0 9 619 816 40 0 0 chr17 4554282 4554382 -90718269 + (GAGAA)n Simple_repeat Simple_repeat 2 101 0 9 619 1003 296 93 51 chr17 4554382 4554438 -90718213 - Tigger9b DNA MER2_type -74 550 505 9 619 1465 60 16 11 chr17 4554438 4554623 -90718028 + B2_Mm2 SINE B2 2 187 -8 9 619 1003 296 93 51 chr17 4554623 4555093 -90717558 - Tigger9b DNA MER2_type -120 504 2 9 619 297 239 0 0 chr17 4555095 4555212 -90717439 + (TA)n Simple_repeat Simple_repeat 1 117 0 9 619 26 0 0 0 chr17 4555328 4555354 -90717297 + AT_rich Low_complexity Low_complexity 1 26 0 1 619 492 314 14 35 chr17 4555747 4555889 -90716762 + RSINE1 SINE B4 17 155 -10 1 619 212 276 15 8 chr17 4559054 4559148 -90713503 + MIRm SINE MIR 56 154 -122 1 619 336 48 0 0 chr17 4559206 4559248 -90713403 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 619 387 0 0 0 chr17 4559248 4559290 -90713361 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 619 333 0 0 0 chr17 4560057 4560094 -90712557 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 619 513 225 134 24 chr17 4560099 4560263 -90712388 - MTC LTR MaLR -1 420 239 1 619 737 210 130 110 chr17 4560318 4560339 -90712312 - ORR1C2 LTR MaLR -78 306 287 1 619 1379 159 9 0 chr17 4560339 4560559 -90712092 + URR1B DNA MER1_type 1 222 -3 1 619 737 210 130 110 chr17 4560559 4560837 -90711814 - ORR1C2 LTR MaLR -98 286 1 1 619 746 327 124 22 chr17 4560877 4561287 -90711364 - Lx8 LINE L1 -143 7330 6879 1 619 293 297 27 0 chr17 4561356 4561430 -90711221 - RSINE1 SINE B4 -4 161 86 1 619 408 40 0 0 chr17 4561430 4561480 -90711171 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 619 220 152 21 21 chr17 4561482 4561529 -90711122 + CT-rich Low_complexity Low_complexity 4 50 0 1 619 298 217 0 16 chr17 4561529 4561590 -90711061 - RSINE1 SINE B4 -69 96 37 1 619 219 25 75 0 chr17 4561614 4561654 -90710997 + (TTTTG)n Simple_repeat Simple_repeat 4 46 0 1 619 279 0 0 0 chr17 4562545 4562576 -90710075 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 619 767 281 62 62 chr17 4562741 4563030 -90709621 + ORR1E LTR MaLR 1 289 -70 1 619 1356 213 88 68 chr17 4563440 4563939 -90708712 - RLTR11A LTR ERVK -4 524 16 1 619 216 97 0 0 chr17 4566439 4566470 -90706181 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 1 619 585 276 0 0 chr17 4566503 4566637 -90706014 - B1F1 SINE Alu -7 142 9 1 619 225 363 62 0 chr17 4567786 4567899 -90704752 + MIR SINE MIR 15 134 -128 1 619 269 222 27 27 chr17 4568472 4568546 -90704105 + B4A SINE B4 201 274 -18 1 619 492 62 0 0 chr17 4570188 4570252 -90702399 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 619 1941 117 7 0 chr17 4570297 4570606 -90702045 - ORR1A2 LTR MaLR -16 311 1 1 619 388 299 19 57 chr17 4570903 4571169 -90701482 + GA-rich Low_complexity Low_complexity 1 255 0 1 619 7150 58 0 0 chr17 4572252 4573338 -90699313 + L1_Mus1 LINE L1 5355 6440 -127 1 619 213 274 0 0 chr17 4573720 4573793 -90698858 + GA-rich Low_complexity Low_complexity 3 75 0 1 619 432 0 0 0 chr17 4575572 4575620 -90697031 + (TC)n Simple_repeat Simple_repeat 1 48 0 1 619 280 281 98 54 chr17 4576791 4577108 -90695543 + MTEb LTR MaLR 8 352 -27 1 619 279 0 0 0 chr17 4577468 4577499 -90695152 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 1 619 482 330 16 43 chr17 4577528 4577715 -90694936 + B4 SINE B4 51 232 -60 1 619 210 191 0 0 chr17 4577815 4577862 -90694789 + GA-rich Low_complexity Low_complexity 3 49 0 1 619 360 0 0 0 chr17 4578970 4579010 -90693641 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 619 903 208 64 5 chr17 4579121 4579324 -90693327 - B3 SINE B2 0 216 2 1 619 423 113 0 0 chr17 4579393 4579464 -90693187 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 619 455 281 167 36 chr17 4579498 4579749 -90692902 - B4A SINE B4 -8 284 1 1 619 474 259 51 56 chr17 4580636 4580832 -90691819 + B3A SINE B2 1 195 -3 1 619 23 33 0 0 chr17 4580835 4580865 -90691786 + AT_rich Low_complexity Low_complexity 1 30 0 1 619 34581 88 12 13 chr17 4581708 4587445 -90685206 + L1Md_F LINE L1 217 5794 -89 1 77 5794 59 1 1 chr17 4587447 4588161 -90684490 + L1Md_F2 LINE L1 4873 5586 -297 1 620 8178 50 5 0 chr17 4588161 4589151 -90683500 + L1Md_F2 LINE L1 5587 6581 -1 1 620 6258 68 1 5 chr17 4589143 4589946 -90682705 + L1Md_F2 LINE L1 5783 6582 0 1 620 241 234 96 38 chr17 4590460 4590569 -90682082 - MIRb SINE MIR -75 193 71 1 620 241 118 19 19 chr17 4590617 4590628 -90682023 + (TTG)n Simple_repeat Simple_repeat 3 13 0 1 620 579 66 0 0 chr17 4590628 4590704 -90681947 + (TGG)n Simple_repeat Simple_repeat 1 76 0 1 620 241 118 19 19 chr17 4590704 4590744 -90681907 + (TTG)n Simple_repeat Simple_repeat 1 41 0 1 620 508 314 22 54 chr17 4590760 4590982 -90681669 - ORR1E LTR MaLR -120 239 25 1 620 409 250 30 0 chr17 4591110 4591210 -90681441 + B1F SINE Alu 10 112 -37 1 620 384 337 27 11 chr17 4591574 4591757 -90680894 - MIR SINE MIR -10 252 67 1 620 3008 107 220 0 chr17 4594507 4594985 -90677666 + MT2B2 LTR ERVL 1 583 -1 1 620 198 0 0 0 chr17 4596164 4596186 -90676465 + (A)n Simple_repeat Simple_repeat 1 22 0 1 620 1092 181 110 4 chr17 4596186 4596414 -90676237 + RMER15 LTR ERVL 219 470 -105 1 620 257 170 0 0 chr17 4600590 4600643 -90672008 + RLTR15 LTR ERVK 1 53 -306 1 620 1065 109 91 0 chr17 4600655 4600820 -90671831 + B2_Mm2 SINE B2 2 181 -14 1 620 363 80 360 10 chr17 4600833 4600933 -90671718 + B2_Mm2 SINE B2 47 181 -14 1 620 1584 164 6 16 chr17 4600934 4601250 -90671401 + RLTR15 LTR ERVK 47 359 0 1 620 204 250 39 0 chr17 4601559 4601611 -90671040 + MIRb SINE MIR 121 174 -94 1 620 365 133 0 13 chr17 4601875 4601951 -90670700 + (TG)n Simple_repeat Simple_repeat 2 76 0 1 620 624 214 0 0 chr17 4601963 4602136 -90670515 + (TG)n Simple_repeat Simple_repeat 1 173 0 1 620 589 197 2 30 chr17 4602183 4602663 -90669988 + (TG)n Simple_repeat Simple_repeat 1 466 0 1 620 639 269 204 4 chr17 4602697 4602932 -90669719 - B4A SINE B4 -10 282 1 1 620 806 148 26 6 chr17 4602950 4603106 -90669545 - B3 SINE B2 -5 211 53 1 620 342 0 0 0 chr17 4603165 4603203 -90669448 + (TCCC)n Simple_repeat Simple_repeat 4 41 0 1 620 2589 84 3 68 chr17 4603210 4603594 -90669057 - RLTR10D LTR ERVK 0 359 1 1 620 789 67 0 0 chr17 4603594 4603698 -90668953 + (TTCC)n Simple_repeat Simple_repeat 3 106 0 1 620 801 265 21 89 chr17 4605450 4605732 -90666919 + B4 SINE B4 2 264 -28 1 620 777 132 36 0 chr17 4605737 4605904 -90666747 + GA-rich Low_complexity Low_complexity 2 174 0 1 620 526 254 46 0 chr17 4605912 4606042 -90666609 - Lx9 LINE L1 -1168 6476 6341 1 620 525 152 29 6 chr17 4606054 4606226 -90666425 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 1 620 987 247 42 38 chr17 4606274 4606521 -90666130 - Lx9 LINE L1 -263 6028 5717 1 620 2235 115 12 0 chr17 4606521 4606844 -90665807 + ORR1A4 LTR MaLR 3 329 0 1 620 987 228 0 35 chr17 4606844 4606942 -90665709 - Lx9 LINE L1 -131 5716 5619 1 620 994 297 53 6 chr17 4606947 4607266 -90665385 + Lx9 LINE L1 6521 6854 -790 1 620 282 351 23 29 chr17 4607409 4607582 -90665069 + Lx8 LINE L1 7045 7216 -257 1 620 230 316 100 20 chr17 4607617 4607717 -90664934 + RMER15 LTR ERVL 425 532 -43 1 620 234 0 0 0 chr17 4608136 4608162 -90664489 + (TGG)n Simple_repeat Simple_repeat 3 28 0 1 620 794 236 17 17 chr17 4608195 4608376 -90664275 - B3A SINE B2 -16 182 2 1 620 203 0 37 0 chr17 4609778 4609805 -90662846 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1 620 189 0 0 0 chr17 4609876 4609897 -90662754 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 1 620 1231 167 13 22 chr17 4610772 4610998 -90661653 + URR1A DNA MER1_type 3 226 0 1 620 852 177 156 0 chr17 4611109 4611295 -90661356 + B3 SINE B2 2 216 0 1 620 217 0 29 29 chr17 4612805 4612839 -90659812 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 1 620 502 297 180 35 chr17 4615168 4615479 -90657172 - ORR1D2 LTR MaLR -9 361 6 1 620 435 280 51 36 chr17 4615637 4615774 -90656877 - B1F2 SINE Alu -10 139 1 1 620 21 57 0 0 chr17 4615834 4615869 -90656782 + AT_rich Low_complexity Low_complexity 1 35 0 1 620 439 314 70 60 chr17 4616004 4616466 -90656185 - MLT2B1 LTR ERVL 0 567 6 1 620 223 241 52 0 chr17 4617115 4617173 -90655478 + B1F1 SINE Alu 4 64 -85 1 620 333 0 0 0 chr17 4617339 4617376 -90655275 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 620 351 304 65 58 chr17 4617809 4617993 -90654658 - MLT1A1 LTR MaLR -41 324 162 1 620 1104 157 93 5 chr17 4617993 4618198 -90654453 + URR1A DNA MER1_type 4 226 0 1 620 351 322 58 81 chr17 4618198 4618332 -90654319 - MLT1A1 LTR MaLR -247 161 19 1 620 201 207 85 17 chr17 4618520 4618579 -90654072 + MIR3 SINE MIR 119 181 -27 1 620 223 277 15 44 chr17 4618771 4618839 -90653812 - MIR SINE MIR -113 95 30 1 620 483 18 0 0 chr17 4619255 4619311 -90653340 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 620 226 372 7 46 chr17 4619476 4619628 -90653023 - MER46C DNA MER2_type -187 151 6 1 620 239 292 52 10 chr17 4619898 4619995 -90652656 + MER58A DNA MER1_type 5 105 -119 1 620 558 43 0 0 chr17 4621732 4621801 -90650850 + (GGGA)n Simple_repeat Simple_repeat 2 70 0 1 620 1408 165 111 29 chr17 4622059 4622445 -90650206 + RMER10A LTR ERVL 1 418 -24 1 620 297 0 0 0 chr17 4622483 4622516 -90650135 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 620 297 0 0 0 chr17 4623159 4623192 -90649459 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 620 183 356 18 71 chr17 4624147 4624259 -90648392 - L2b LINE L2 -82 3293 3188 1 620 1120 62 7 0 chr17 4624302 4624447 -90648204 + B1_Mus2 SINE Alu 2 147 0 1 620 366 156 0 0 chr17 4624527 4624591 -90648060 + (TA)n Simple_repeat Simple_repeat 1 64 0 1 620 253 346 58 19 chr17 4624700 4624856 -90647795 - ORR1E LTR MaLR -159 200 39 1 620 220 348 17 25 chr17 4625181 4625299 -90647352 - MER5B DNA MER1_type -5 173 57 1 620 183 316 19 67 chr17 4625611 4625716 -90646935 - L2 LINE L2 -2515 904 805 1 620 1243 41 0 0 chr17 4625734 4625880 -90646771 + B1_Mus1 SINE Alu 2 147 -1 1 620 263 93 0 23 chr17 4626165 4626173 -90646478 + (CACTC)n Simple_repeat Simple_repeat 3 10 0 1 620 1494 33 0 0 chr17 4626173 4626353 -90646298 + (CATTC)n Simple_repeat Simple_repeat 1 180 0 2 620 263 93 0 23 chr17 4626353 4626388 -90646263 + (CACTC)n Simple_repeat Simple_repeat 1 35 0 2 620 1452 43 0 0 chr17 4626388 4626598 -90646053 + (CATTC)n Satellite Satellite 1 210 0 2 620 528 306 42 38 chr17 4626879 4627209 -90645442 + L2a LINE L2 2720 3100 -326 2 620 798 143 32 7 chr17 4629680 4629835 -90642816 + URR1A DNA MER1_type 67 225 -1 2 620 294 164 0 0 chr17 4629849 4629904 -90642747 + GA-rich Low_complexity Low_complexity 1 55 0 2 620 464 262 120 5 chr17 4629940 4630124 -90642527 + MER99 DNA hAT? 183 387 -444 2 620 353 267 115 38 chr17 4630337 4630520 -90642131 + MER99 DNA hAT? 632 828 -3 2 620 26 0 0 0 chr17 4631036 4631062 -90641589 + AT_rich Low_complexity Low_complexity 1 26 0 2 620 234 0 0 0 chr17 4632442 4632468 -90640183 + (A)n Simple_repeat Simple_repeat 1 26 0 2 620 492 99 0 0 chr17 4633593 4633664 -90638987 + (TTTTC)n Simple_repeat Simple_repeat 4 74 0 2 620 351 215 161 0 chr17 4635023 4635116 -90637535 + PB1D10 SINE Alu 2 109 -8 2 620 1163 62 0 7 chr17 4635974 4636121 -90636530 - B1_Mus2 SINE Alu 0 147 2 2 620 551 248 31 0 chr17 4636274 4636403 -90636248 + B1F2 SINE Alu 1 133 -16 2 620 240 336 15 23 chr17 4636405 4636458 -90636193 + polypurine Low_complexity Low_complexity 4 56 0 2 620 561 30 0 0 chr17 4636458 4636525 -90636126 + (GGGA)n Simple_repeat Simple_repeat 3 69 0 2 620 255 350 8 11 chr17 4636525 4636607 -90636044 + polypurine Low_complexity Low_complexity 1 81 0 2 620 611 253 76 11 chr17 4637260 4637444 -90635207 + B4 SINE B4 24 219 -73 2 620 273 270 0 0 chr17 4637451 4637551 -90635100 + (TA)n Simple_repeat Simple_repeat 2 101 0 2 620 200 227 0 0 chr17 4637583 4637627 -90635024 + (CATATA)n Simple_repeat Simple_repeat 1 44 0 2 620 4681 253 130 21 chr17 4637964 4639469 -90633182 + Lx7 LINE L1 5825 7493 -203 2 620 992 171 166 0 chr17 4639780 4639973 -90632678 + URR1B DNA MER1_type 1 225 0 2 620 2017 291 73 23 chr17 4641720 4642447 -90630204 + Lx8 LINE L1 6246 7008 -465 2 620 1082 112 95 0 chr17 4642467 4642636 -90630015 - B2_Mm2 SINE B2 -9 186 2 2 620 360 0 0 0 chr17 4643961 4644001 -90628650 + (TC)n Simple_repeat Simple_repeat 1 40 0 2 620 458 320 21 75 chr17 4644133 4644319 -90628332 - B4A SINE B4 -116 176 1 2 620 22 0 0 0 chr17 4645279 4645301 -90627350 + AT_rich Low_complexity Low_complexity 1 22 0 2 620 1488 195 38 65 chr17 4645406 4645773 -90626878 + MTE2b LTR MaLR 19 375 -4 2 620 316 344 183 35 chr17 4645906 4646195 -90626456 + LTR16C LTR ERVL 4 335 -154 2 620 621 250 182 101 chr17 4646866 4647213 -90625438 - MTE2a LTR MaLR 0 379 5 2 620 1100 238 13 71 chr17 4647399 4647707 -90624944 + B4 SINE B4 1 290 -2 2 620 878 148 0 0 chr17 4649215 4649350 -90623301 + B1_Mus1 SINE Alu 2 136 -12 2 620 841 293 24 71 chr17 4649734 4650031 -90622620 + B4 SINE B4 2 284 -8 2 620 844 170 14 0 chr17 4650109 4650250 -90622401 + B1_Mur3 SINE Alu 1 143 -6 2 620 346 39 39 0 chr17 4650785 4650837 -90621814 + (TC)n Simple_repeat Simple_repeat 1 54 0 2 620 204 97 0 0 chr17 4650846 4650877 -90621774 + (CAT)n Simple_repeat Simple_repeat 1 31 0 2 620 750 278 255 32 chr17 4650991 4651466 -90621185 - Lx8 LINE L1 -250 7223 6643 2 620 273 39 39 19 chr17 4651881 4651933 -90620718 + (TTG)n Simple_repeat Simple_repeat 2 54 0 2 620 1189 49 14 0 chr17 4651955 4652099 -90620552 - B1_Mm SINE Alu 0 147 2 2 620 239 342 12 12 chr17 4652149 4652229 -90620422 + RSINE1 SINE B4 1 80 -85 2 620 318 26 0 0 chr17 4652400 4652439 -90620212 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 620 24 32 0 0 chr17 4652458 4652489 -90620162 + AT_rich Low_complexity Low_complexity 1 31 0 2 620 21 0 0 0 chr17 4652556 4652577 -90620074 + AT_rich Low_complexity Low_complexity 1 21 0 2 620 428 320 81 88 chr17 4653565 4653849 -90618802 + B4A SINE B4 11 292 0 2 620 27 0 0 0 chr17 4654162 4654189 -90618462 + AT_rich Low_complexity Low_complexity 1 27 0 2 620 302 346 18 91 chr17 4654674 4654910 -90617741 + B4A SINE B4 2 233 -59 2 620 261 0 0 0 chr17 4654910 4654939 -90617712 + (A)n Simple_repeat Simple_repeat 1 29 0 2 620 695 116 24 24 chr17 4656822 4656983 -90615668 + (TCTCTG)n Simple_repeat Simple_repeat 2 162 0 2 620 180 0 0 0 chr17 4656983 4657003 -90615648 + (CTG)n Simple_repeat Simple_repeat 2 21 0 2 620 695 116 24 24 chr17 4657003 4657009 -90615642 + (TCTCTG)n Simple_repeat Simple_repeat 2 7 0 2 620 249 217 33 0 chr17 4657056 4657116 -90615535 + ORR1D1 LTR MaLR 267 328 -46 2 620 414 250 0 10 chr17 4657122 4657219 -90615432 + MTEa LTR MaLR 260 355 -24 2 620 484 286 23 0 chr17 4657259 4657392 -90615259 - ORR1D1 LTR MaLR -238 136 1 2 620 184 289 26 26 chr17 4658279 4658357 -90614294 - MIR3 SINE MIR -10 198 121 2 620 204 217 0 0 chr17 4659579 4659625 -90613026 + CT-rich Low_complexity Low_complexity 2 47 0 2 620 735 204 0 0 chr17 4660594 4660795 -90611856 + (CATATA)n Simple_repeat Simple_repeat 1 201 0 2 620 678 171 62 0 chr17 4660881 4661010 -90611641 + RMER19B LTR ERVK 1 137 -765 2 620 756 212 64 6 chr17 4660988 4661145 -90611506 + RMER19B LTR ERVK 56 221 -681 2 620 1964 155 192 8 chr17 4661168 4661608 -90611043 + RMER19B LTR ERVK 353 856 -46 2 620 256 354 54 0 chr17 4661737 4661867 -90610784 - HAL1 LINE L1 -2363 144 8 2 620 232 352 21 54 chr17 4662101 4662287 -90610364 - MIRb SINE MIR -11 257 78 2 620 3169 216 45 75 chr17 4663828 4664657 -90607994 + RMER13A LTR ERVK 14 817 -43 2 620 737 235 30 18 chr17 4664672 4664837 -90607814 - Lx8 LINE L1 -829 6644 6478 2 620 324 0 0 0 chr17 4665384 4665420 -90607231 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 620 423 0 0 0 chr17 4666435 4666482 -90606169 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 2 620 330 259 136 8 chr17 4666773 4666949 -90605702 + MIRb SINE MIR 1 185 -83 2 620 1258 121 10 10 chr17 4666985 4667178 -90605473 - B2_Mm2 SINE B2 -1 194 2 2 620 374 115 0 0 chr17 4667339 4667391 -90605260 - HAL1-3A_ME LINE L1 -832 2026 1975 2 620 662 151 29 11 chr17 4667414 4667588 -90605063 + (TG)n Simple_repeat Simple_repeat 2 178 0 2 620 367 168 34 20 chr17 4667611 4667757 -90604894 + (TG)n Simple_repeat Simple_repeat 1 148 0 2 620 762 281 25 66 chr17 4667801 4668087 -90604564 - B4A SINE B4 -18 274 1 2 620 31 58 0 0 chr17 4670135 4670187 -90602464 + AT_rich Low_complexity Low_complexity 1 52 0 2 620 1229 251 40 134 chr17 4670371 4670826 -90601825 - MTD LTR MaLR 0 419 8 2 620 213 39 0 0 chr17 4674059 4674085 -90598566 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 620 410 53 18 0 chr17 4674161 4674218 -90598433 + (CATA)n Simple_repeat Simple_repeat 2 59 0 2 620 180 0 0 0 chr17 4674223 4674243 -90598408 + (TATG)n Simple_repeat Simple_repeat 1 20 0 2 620 25 0 0 0 chr17 4675084 4675109 -90597542 + AT_rich Low_complexity Low_complexity 1 25 0 2 620 297 285 42 85 chr17 4675935 4676100 -90596551 - MLT1B LTR MaLR -215 175 18 2 620 743 249 19 78 chr17 4676176 4676381 -90596270 + B3A SINE B2 6 198 0 2 620 444 279 8 86 chr17 4676430 4676692 -90595959 + L1VL1 LINE L1 45 400 -6022 2 620 341 282 30 8 chr17 4676736 4676868 -90595783 + L1_Mus1 LINE L1 675 809 -5807 2 620 29621 146 4 122 chr17 4676870 4678019 -90594632 + L1_Mus1 LINE L1 725 1718 -4165 2 620 791 93 0 0 chr17 4678019 4678126 -90594525 + U6 snRNA snRNA 1 107 0 2 620 1130 51 14 0 chr17 4678126 4678264 -90594387 + B1_Mm SINE Alu 1 140 -7 2 620 29621 93 6 11 chr17 4678264 4683141 -90589510 + L1_Mus1 LINE L1 1719 6567 0 2 620 781 281 162 60 chr17 4683204 4683359 -90589292 + MLT1D LTR MaLR 27 187 -318 2 620 3049 34 3 0 chr17 4683359 4683712 -90588939 + IAPEY2_LTR LTR ERVK 1 354 -3 2 620 781 281 162 60 chr17 4683712 4683988 -90588663 + MLT1D LTR MaLR 188 502 -3 2 620 207 318 45 9 chr17 4684436 4684547 -90588104 + (CCCTA)n Simple_repeat Simple_repeat 1 115 0 2 620 375 302 128 84 chr17 4685454 4685798 -90586853 + MLT1A0 LTR MaLR 3 361 -4 2 620 1110 95 0 0 chr17 4685891 4686038 -90586613 + B1_Mus1 SINE Alu 2 148 0 2 620 1090 160 113 20 chr17 4686059 4686263 -90586388 - URR1A DNA MER1_type -3 223 1 2 620 195 318 66 75 chr17 4686324 4686559 -90586092 - MIRb SINE MIR 0 268 20 2 620 368 314 10 0 chr17 4687151 4687253 -90585398 + ORR1E LTR MaLR 7 109 -250 2 620 198 0 0 0 chr17 4687482 4687504 -90585147 + (A)n Simple_repeat Simple_repeat 1 22 0 2 620 333 0 0 0 chr17 4688741 4688778 -90583873 + (TC)n Simple_repeat Simple_repeat 1 37 0 2 620 318 308 93 0 chr17 4688942 4689049 -90583602 + RSINE1 SINE B4 15 131 -34 2 620 985 188 22 6 chr17 4689391 4689573 -90583078 + B3A SINE B2 1 185 -13 2 620 239 191 0 16 chr17 4689890 4689954 -90582697 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 620 559 272 50 89 chr17 4689960 4690170 -90582481 - B3A SINE B2 -16 200 1 2 620 639 323 43 0 chr17 4690423 4690454 -90582197 - B3A SINE B2 -2 196 166 2 620 540 0 0 0 chr17 4690454 4690514 -90582137 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 620 639 323 43 0 chr17 4690514 4690668 -90581983 - B3A SINE B2 -33 165 4 2 620 354 304 40 45 chr17 4690687 4690887 -90581764 + L1MEe LINE L1 916 1114 -3740 2 620 2799 211 81 16 chr17 4691445 4691602 -90581049 - Lx9 LINE L1 -711 6933 6779 2 620 4230 142 88 6 chr17 4691602 4692283 -90580368 - RMER19A LTR ERVK 0 737 1 2 620 2799 211 81 16 chr17 4692283 4692832 -90579819 - Lx9 LINE L1 -866 6778 6181 2 620 1714 189 56 0 chr17 4692833 4693172 -90579479 + Lx9 LINE L1 6923 7280 -364 2 620 3777 113 60 0 chr17 4693174 4693777 -90578874 + L1VL4 LINE L1 195 833 -5469 2 620 4437 110 55 3 chr17 4693792 4694861 -90577790 + L1Md_F2 LINE L1 380 1511 -4372 2 620 8288 91 9 1 chr17 4694860 4696085 -90576566 + L1Md_F2 LINE L1 4351 5585 -298 2 620 6708 84 42 18 chr17 4696086 4697048 -90575603 + L1Md_F2 LINE L1 5587 6571 -11 2 620 9252 79 51 6 chr17 4697069 4698554 -90574097 + MusHAL1 LINE L1 614 2161 -1192 3 620 1529 122 20 4 chr17 4698554 4698801 -90573850 + Lx LINE L1 6404 6654 0 3 620 822 246 35 85 chr17 4698801 4699178 -90573473 + Lx9 LINE L1 7265 7622 -22 2 620 514 288 112 0 chr17 4699267 4699392 -90573259 + RSINE1 SINE B4 5 143 -22 3 620 679 215 42 0 chr17 4699397 4699541 -90573110 + Lx9 LINE L1 6496 6645 -999 3 620 293 231 27 18 chr17 4700316 4700426 -90572225 + L1M5 LINE L1 4204 4314 -1832 3 620 324 306 233 13 chr17 4700457 4700775 -90571876 + L1M5 LINE L1 4406 4793 -1353 3 620 364 349 92 31 chr17 4700810 4701159 -90571492 + L1M5 LINE L1 4855 5224 -922 3 620 323 289 142 16 chr17 4701541 4701731 -90570920 - Charlie1a DNA MER1_type -21 1434 1221 3 620 435 278 41 47 chr17 4701809 4701979 -90570672 - Charlie1a DNA MER1_type -588 867 699 3 620 345 140 0 0 chr17 4702016 4702073 -90570578 + (T)n Simple_repeat Simple_repeat 1 57 0 3 620 448 352 38 21 chr17 4702157 4702472 -90570179 + MLT1A1 LTR MaLR 25 394 -14 3 620 607 317 47 21 chr17 4702716 4702951 -90569700 - Charlie1a DNA MER1_type -1210 245 5 3 620 278 257 56 9 chr17 4702998 4703161 -90569490 + L1M5 LINE L1 5703 5880 -360 3 620 236 238 167 7 chr17 4703509 4703653 -90568998 - Lx9 LINE L1 -1 7643 7477 3 620 247 128 43 81 chr17 4703663 4703824 -90568827 + (TATATG)n Simple_repeat Simple_repeat 4 158 0 3 620 267 105 32 73 chr17 4703836 4703959 -90568692 + (TATATG)n Simple_repeat Simple_repeat 1 118 0 3 620 692 92 100 0 chr17 4703959 4704089 -90568562 - Lx9 LINE L1 -127 7517 7375 3 620 1281 207 60 24 chr17 4704092 4704423 -90568228 - Lx9 LINE L1 -152 7492 7150 3 620 498 290 32 59 chr17 4705147 4705334 -90567317 + B3A SINE B2 1 182 -16 3 620 673 233 186 63 chr17 4705395 4705632 -90567019 + B4A SINE B4 26 292 0 3 620 378 256 0 44 chr17 4706073 4706163 -90566488 - B1F SINE Alu -51 98 13 3 620 289 262 0 23 chr17 4707434 4707520 -90565131 + CT-rich Low_complexity Low_complexity 2 85 0 3 620 1184 103 60 0 chr17 4707747 4707931 -90564720 + B2_Mm2 SINE B2 1 195 0 3 620 903 194 89 21 chr17 4709430 4709620 -90563031 + B3 SINE B2 1 203 -13 3 620 678 200 17 11 chr17 4709621 4709798 -90562853 + (TATG)n Simple_repeat Simple_repeat 2 179 0 3 620 333 310 158 55 chr17 4709825 4709989 -90562662 - MTEa LTR MaLR -196 183 3 3 620 1092 103 0 0 chr17 4709990 4710136 -90562515 + B1_Mus2 SINE Alu 2 147 0 3 620 353 0 0 60 chr17 4710136 4710186 -90562465 + (A)n Simple_repeat Simple_repeat 1 47 0 3 620 323 248 43 25 chr17 4710304 4710465 -90562186 + (TA)n Simple_repeat Simple_repeat 1 164 0 3 620 315 298 8 34 chr17 4711682 4711800 -90560851 + PB1D10 SINE Alu 2 116 -1 3 620 1242 209 76 96 chr17 4711805 4712212 -90560439 + Lx5 LINE L1 6652 7050 0 3 620 739 274 92 124 chr17 4712266 4712645 -90560006 - MTEa LTR MaLR -12 367 1 3 620 675 303 0 79 chr17 4713387 4713602 -90559049 + B3A SINE B2 1 198 0 3 620 390 289 178 67 chr17 4713879 4714189 -90558462 - MTEa LTR MaLR -2 377 3 3 620 207 339 78 9 chr17 4714209 4714325 -90558326 + MIRb SINE MIR 125 248 -20 3 620 251 215 91 15 chr17 4714522 4714588 -90558063 - B4A SINE B4 -17 275 205 3 77 29474 92 22 3 chr17 4714607 4719836 -90552815 - L1_Mus1 LINE L1 0 6567 1250 3 621 236 30 30 0 chr17 4719836 4719869 -90552782 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 3 621 29474 154 8 71 chr17 4719869 4720432 -90552219 - L1_Mus1 LINE L1 -4634 1249 725 3 621 423 233 52 8 chr17 4720440 4720574 -90552077 - L1_Mus1 LINE L1 -5813 803 664 3 621 629 322 58 5 chr17 4720693 4720899 -90551752 - B4A SINE B4 -75 217 1 3 621 270 244 14 37 chr17 4721939 4722034 -90550617 - MIR SINE MIR -120 148 63 3 621 22 0 0 0 chr17 4722614 4722636 -90550015 + AT_rich Low_complexity Low_complexity 1 22 0 3 621 472 215 17 17 chr17 4722721 4722969 -90549682 + GA-rich Low_complexity Low_complexity 1 248 0 3 621 331 294 103 27 chr17 4723905 4724090 -90548561 - RMER15 LTR ERVL -40 535 337 3 621 228 324 50 99 chr17 4724216 4724377 -90548274 - Lx8 LINE L1 -284 7189 7037 3 621 198 267 105 65 chr17 4724547 4724671 -90547980 - MIR3 SINE MIR -47 161 33 3 621 180 0 0 0 chr17 4725292 4725312 -90547339 + (A)n Simple_repeat Simple_repeat 1 20 0 3 621 180 277 0 0 chr17 4725783 4725866 -90546785 + (CATA)n Simple_repeat Simple_repeat 4 86 0 3 621 246 105 0 0 chr17 4725872 4725910 -90546741 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 621 189 0 0 0 chr17 4725910 4725930 -90546721 + (GA)n Simple_repeat Simple_repeat 2 22 0 3 621 277 206 19 0 chr17 4725939 4726046 -90546605 + (CA)n Simple_repeat Simple_repeat 2 110 0 3 621 593 210 4 8 chr17 4726060 4726307 -90546344 + (CA)n Simple_repeat Simple_repeat 1 246 0 3 621 207 100 0 0 chr17 4728224 4728254 -90544397 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 3 621 372 265 124 109 chr17 4728912 4729135 -90543516 - ORR1E LTR MaLR -15 344 122 3 621 624 62 0 0 chr17 4729135 4729216 -90543435 + (CCCCCG)n Simple_repeat Simple_repeat 5 85 0 3 621 372 265 124 109 chr17 4729216 4729331 -90543320 - ORR1E LTR MaLR -238 121 1 3 621 581 291 82 70 chr17 4729579 4729849 -90542802 + B4 SINE B4 2 274 -18 3 621 240 86 0 0 chr17 4729854 4729889 -90542762 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 621 528 45 0 0 chr17 4729889 4729955 -90542696 + (GA)n Simple_repeat Simple_repeat 2 68 0 3 621 327 302 151 0 chr17 4731465 4731584 -90541067 - MER45A DNA Tip100 -41 137 1 3 621 786 239 110 15 chr17 4731733 4731996 -90540655 + B4A SINE B4 1 288 -4 3 621 236 154 19 0 chr17 4732053 4732105 -90540546 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 621 327 25 0 0 chr17 4732118 4732158 -90540493 + (TC)n Simple_repeat Simple_repeat 1 40 0 3 621 558 103 0 0 chr17 4733916 4734003 -90538648 + (TC)n Simple_repeat Simple_repeat 2 88 0 3 621 41 48 0 0 chr17 4734946 4735008 -90537643 + AT_rich Low_complexity Low_complexity 1 62 0 3 621 806 259 16 5 chr17 4736447 4736637 -90536014 + B3 SINE B2 25 216 0 3 621 285 259 35 26 chr17 4736672 4736787 -90535864 + L1MC4 LINE L1 1328 1443 -4772 3 621 293 179 12 0 chr17 4737490 4737574 -90535077 + (CA)n Simple_repeat Simple_repeat 1 85 0 3 621 311 216 42 0 chr17 4737796 4737963 -90534688 + (CA)n Simple_repeat Simple_repeat 1 174 0 3 621 485 166 17 23 chr17 4737974 4738147 -90534504 + (CA)n Simple_repeat Simple_repeat 1 172 0 3 621 726 254 29 9 chr17 4738233 4738426 -90534225 + B3A SINE B2 2 188 -28 3 621 345 133 26 13 chr17 4738675 4738751 -90533900 + GA-rich Low_complexity Low_complexity 4 80 0 3 621 513 115 0 0 chr17 4739449 4739527 -90533124 + (TCCC)n Simple_repeat Simple_repeat 1 78 0 3 621 895 261 65 30 chr17 4739741 4740077 -90532574 - Lx9 LINE L1 -31 7613 7266 3 621 974 157 0 6 chr17 4740191 4740370 -90532281 + GA-rich Low_complexity Low_complexity 2 179 0 3 621 302 274 0 16 chr17 4740380 4740443 -90532208 + B4 SINE B4 224 285 -7 3 621 321 118 0 0 chr17 4740475 4740526 -90532125 + (TA)n Simple_repeat Simple_repeat 1 51 0 3 621 378 0 0 0 chr17 4741420 4741462 -90531189 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 621 504 202 20 5 chr17 4742232 4742344 -90530307 + L1MA5 LINE L1 5651 5760 -537 3 621 1186 251 75 36 chr17 4742374 4742630 -90530021 - MTD LTR MaLR -46 373 99 3 621 1857 169 47 19 chr17 4742630 4742992 -90529659 + ORR1D1 LTR MaLR 3 374 0 3 621 1186 251 75 36 chr17 4742992 4743094 -90529557 - MTD LTR MaLR -321 98 1 3 621 307 169 28 0 chr17 4743118 4743189 -90529462 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 3 621 192 77 0 0 chr17 4743215 4743241 -90529410 + (CATA)n Simple_repeat Simple_repeat 1 26 0 3 621 888 245 79 38 chr17 4743241 4743570 -90529081 + L1MA5 LINE L1 5845 6200 -103 3 621 576 272 12 30 chr17 4743587 4743665 -90528986 + B4A SINE B4 10 84 -208 3 621 230 326 65 50 chr17 4743665 4743804 -90528847 + B1_Mus2 SINE Alu 1 141 -6 3 621 508 228 76 38 chr17 4745014 4745146 -90527505 - B1_Mur3 SINE Alu -12 137 1 3 621 244 329 12 0 chr17 4745151 4745233 -90527418 - ID SINE ID -141 83 1 3 621 192 40 0 0 chr17 4746483 4746508 -90526143 + (CAGA)n Simple_repeat Simple_repeat 1 25 0 3 621 813 301 55 27 chr17 4746629 4746885 -90525766 + Tigger7 DNA MER2_type 1 263 -2228 3 621 466 219 179 16 chr17 4746905 4746936 -90525715 + Tigger7 DNA MER2_type 375 406 -2085 3 621 2246 113 0 38 chr17 4746936 4747207 -90525444 + ORR1A2 LTR MaLR 1 260 -67 3 621 1311 109 5 0 chr17 4747207 4747391 -90525260 + B2_Mm2 SINE B2 2 186 -9 3 621 2246 113 0 38 chr17 4747391 4747459 -90525192 + ORR1A2 LTR MaLR 261 327 0 3 621 466 219 179 16 chr17 4747459 4747617 -90525034 + Tigger7 DNA MER2_type 407 594 -1897 3 621 807 126 0 0 chr17 4747617 4747744 -90524907 + (GAAA)n Simple_repeat Simple_repeat 1 127 0 3 621 416 282 90 21 chr17 4747990 4748135 -90524516 + RSINE1 SINE B4 6 160 -5 3 621 235 325 99 68 chr17 4748299 4748593 -90524058 - Charlie1b DNA MER1_type -205 318 16 3 621 351 65 0 0 chr17 4749078 4749124 -90523527 + (TGGG)n Simple_repeat Simple_repeat 2 47 0 3 621 333 291 161 87 chr17 4749265 4749600 -90523051 - MLT1A0 LTR MaLR -1 364 5 3 621 417 228 0 61 chr17 4749769 4749867 -90522784 + MTEa LTR MaLR 1 92 -287 3 621 35 24 0 0 chr17 4750218 4750260 -90522391 + AT_rich Low_complexity Low_complexity 1 42 0 3 621 243 300 0 28 chr17 4752350 4752422 -90520229 + B4A SINE B4 28 97 -195 3 621 394 242 233 8 chr17 4752650 4752783 -90519868 - RSINE1 SINE B4 0 165 3 3 621 421 202 10 50 chr17 4753023 4753122 -90519529 + B4A SINE B4 1 95 -197 3 621 809 266 57 21 chr17 4753122 4753403 -90519248 + B4A SINE B4 2 292 0 3 621 541 106 59 0 chr17 4754102 4754187 -90518464 - BC1_Mm scRNA scRNA -62 90 1 3 621 319 270 111 0 chr17 4754204 4754330 -90518321 - Charlie23a DNA MER1_type -128 211 72 3 621 291 340 58 76 chr17 4754419 4754592 -90518059 + MTEb LTR MaLR 74 266 -113 3 621 2619 49 65 0 chr17 4754592 4754917 -90517734 + ORR1A1 LTR MaLR 1 346 0 3 621 291 332 45 89 chr17 4754917 4755028 -90517623 + MTEb LTR MaLR 252 374 -5 3 621 234 282 136 16 chr17 4755485 4755669 -90516982 - L1MB4 LINE L1 -5 6175 5970 3 621 230 246 149 14 chr17 4755752 4755826 -90516825 - PB1D10 SINE Alu -33 84 1 3 621 825 10 0 0 chr17 4756129 4756233 -90516418 + B1_Mus2 SINE Alu 44 147 0 3 621 717 12 0 0 chr17 4756240 4756322 -90516329 + (GAAA)n Simple_repeat Simple_repeat 4 85 0 3 621 1075 255 107 41 chr17 4758073 4758437 -90514214 + MTD LTR MaLR 18 405 -14 3 621 297 244 160 0 chr17 4759339 4759458 -90513193 + B1_Mur3 SINE Alu 12 149 0 4 621 890 232 76 14 chr17 4759538 4759620 -90513031 + B4 SINE B4 1 80 -212 4 621 398 0 58 0 chr17 4759620 4759672 -90512979 + (TAAAA)n Simple_repeat Simple_repeat 1 55 0 4 621 890 232 76 14 chr17 4759672 4759812 -90512839 + B4 SINE B4 81 237 -55 4 621 276 102 0 0 chr17 4759975 4760024 -90512627 + (CAGAGA)n Simple_repeat Simple_repeat 6 54 0 4 621 378 0 0 0 chr17 4761612 4761654 -90510997 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 621 398 212 18 0 chr17 4762372 4762485 -90510166 + (CATA)n Simple_repeat Simple_repeat 2 116 0 4 621 260 271 59 0 chr17 4763068 4763153 -90509498 - MLT1K LTR MaLR -175 420 331 4 621 7168 102 16 44 chr17 4763385 4764479 -90508172 - Lx LINE L1 -1 6653 5590 4 621 858 151 144 6 chr17 4764475 4764655 -90507996 - Lx4B LINE L1 -61 6997 6793 4 621 219 133 0 0 chr17 4766374 4766419 -90506232 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 621 647 279 100 38 chr17 4767041 4767297 -90505354 + B4 SINE B4 2 274 -18 4 621 369 0 0 0 chr17 4767297 4767338 -90505313 + (TGGA)n Simple_repeat Simple_repeat 3 43 0 4 621 2468 154 14 26 chr17 4767703 4768124 -90504527 - MTC LTR MaLR -2 419 4 4 621 315 274 28 28 chr17 4768380 4768489 -90504162 + MLT1C LTR MaLR 37 145 -322 4 621 587 191 0 35 chr17 4768544 4768658 -90503993 + B1_Mur3 SINE Alu 23 132 -17 4 621 246 314 45 78 chr17 4769243 4769485 -90503166 + L2b LINE L2 3187 3420 -6 4 621 4991 113 29 12 chr17 4770460 4771309 -90501342 + RMER17D LTR ERVK 26 889 0 4 621 486 295 32 102 chr17 4771783 4772214 -90500437 + L1MB3 LINE L1 5730 6130 -53 4 621 509 305 58 7 chr17 4772360 4772515 -90500136 + RSINE1 SINE B4 3 165 0 4 621 315 318 33 7 chr17 4772566 4772718 -90499933 + MER119 DNA MER1_type 369 524 -59 4 621 653 114 9 0 chr17 4772891 4772996 -90499655 + (GGAA)n Simple_repeat Simple_repeat 4 109 0 4 621 411 296 46 6 chr17 4773292 4773465 -90499186 + Tigger5 DNA MER2_type 2155 2334 -72 4 621 567 264 40 55 chr17 4773485 4773814 -90498837 - RLTR15 LTR ERVK -3 356 33 4 621 1178 44 0 0 chr17 4773831 4773968 -90498683 + B1_Mus2 SINE Alu 1 137 -10 4 621 819 0 0 0 chr17 4773970 4774061 -90498590 + (GA)n Simple_repeat Simple_repeat 2 92 0 4 621 1439 238 38 30 chr17 4774095 4774468 -90498183 - MTD LTR MaLR 0 419 44 4 621 866 57 161 0 chr17 4774468 4774584 -90498067 + B1_Mus2 SINE Alu 4 139 -8 4 621 233 29 29 0 chr17 4774584 4774618 -90498033 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 621 615 230 133 46 chr17 4775119 4775315 -90497336 + B3 SINE B2 1 213 -3 4 621 845 294 14 52 chr17 4775442 4775729 -90496922 + B4A SINE B4 17 292 0 4 621 342 186 0 0 chr17 4775740 4775826 -90496825 + (CA)n Simple_repeat Simple_repeat 2 87 0 4 621 213 121 0 0 chr17 4775856 4775889 -90496762 + (TC)n Simple_repeat Simple_repeat 1 33 0 4 621 270 148 0 0 chr17 4775888 4775942 -90496709 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 621 952 192 90 62 chr17 4776085 4776374 -90496277 + MTEa LTR MaLR 73 369 -10 4 621 948 122 0 0 chr17 4777383 4777736 -90494915 + (CA)n Simple_repeat Simple_repeat 1 353 0 4 621 198 0 0 0 chr17 4778148 4778170 -90494481 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 4 621 207 0 0 0 chr17 4778523 4778546 -90494105 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 621 292 116 206 55 chr17 4778996 4779069 -90493582 - L1MB3 LINE L1 -69 6114 6031 4 621 266 264 47 24 chr17 4779085 4779270 -90493381 - L1MB3 LINE L1 -197 5986 5795 4 621 752 257 52 101 chr17 4780231 4780517 -90492134 + B4 SINE B4 1 272 -20 4 621 393 22 0 0 chr17 4780532 4780578 -90492073 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 621 207 0 0 0 chr17 4782448 4782471 -90490180 + (TGG)n Simple_repeat Simple_repeat 1 23 0 4 621 307 167 78 0 chr17 4782478 4782568 -90490083 + (GTTTG)n Simple_repeat Simple_repeat 3 99 0 4 621 842 256 29 10 chr17 4783685 4783894 -90488757 + B4 SINE B4 58 270 -22 4 621 357 24 0 0 chr17 4783895 4783937 -90488714 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 621 711 223 140 39 chr17 4784236 4784493 -90488158 + MLT1B LTR MaLR 37 319 -71 4 621 742 236 64 46 chr17 4784722 4784940 -90487711 + ID_B1 SINE B4 3 224 0 4 621 531 227 0 0 chr17 4784941 4785069 -90487582 + GA-rich Low_complexity Low_complexity 2 129 0 4 621 342 0 0 0 chr17 4785137 4785175 -90487476 + (TA)n Simple_repeat Simple_repeat 1 38 0 4 621 360 0 0 0 chr17 4785749 4785789 -90486862 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 621 198 0 0 0 chr17 4786532 4786554 -90486097 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 621 576 235 43 22 chr17 4786577 4786716 -90485935 + B4A SINE B4 3 144 -148 4 621 720 200 0 0 chr17 4786829 4787009 -90485642 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 621 249 208 0 0 chr17 4787009 4787057 -90485594 + (CATA)n Simple_repeat Simple_repeat 3 50 0 4 621 749 251 104 57 chr17 4787286 4787565 -90485086 - B4A SINE B4 0 292 1 4 621 604 182 54 42 chr17 4788469 4788635 -90484016 + RMER1A Other Other 861 1028 -2 4 621 458 305 61 8 chr17 4788679 4788940 -90483711 + L1MEg LINE L1 826 1100 -5142 4 621 407 360 84 37 chr17 4789044 4789427 -90483224 + MLT2F LTR ERVL 4 404 -259 4 621 1649 230 24 26 chr17 4789432 4789851 -90482800 - MTD LTR MaLR 0 419 2 4 621 930 312 74 40 chr17 4790393 4791204 -90481447 + L1MEg LINE L1 2292 3130 -3016 4 621 253 238 0 16 chr17 4791430 4791494 -90481157 - MLT1D LTR MaLR -106 399 337 4 621 273 89 0 0 chr17 4793101 4793146 -90479505 + (T)n Simple_repeat Simple_repeat 1 45 0 4 621 534 267 20 33 chr17 4793148 4793299 -90479352 - B1_Mur2 SINE Alu 0 149 1 4 621 423 218 0 0 chr17 4794062 4794163 -90478488 + GA-rich Low_complexity Low_complexity 1 101 0 4 621 537 242 8 39 chr17 4794212 4794341 -90478310 - RSINE1 SINE B4 -37 128 4 4 621 449 335 65 27 chr17 4794996 4795329 -90477322 + L1ME3 LINE L1 5520 5866 -296 4 621 235 284 17 0 chr17 4796025 4796084 -90476567 - BC1_Mm scRNA scRNA -6 77 19 4 621 539 278 6 50 chr17 4797221 4797380 -90475271 + RSINE1 SINE B4 3 154 -11 4 621 266 0 0 29 chr17 4797385 4797420 -90475231 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 621 21 0 0 0 chr17 4797437 4797458 -90475193 + AT_rich Low_complexity Low_complexity 1 21 0 4 621 398 298 0 26 chr17 4797534 4797551 -90475100 + ID SINE ID 65 78 -146 4 621 492 216 11 10 chr17 4797551 4797668 -90474983 + B1F SINE Alu 1 118 -2 4 621 1500 128 83 23 chr17 4797699 4797963 -90474688 + Lx4B LINE L1 6760 7039 -19 4 621 192 77 0 0 chr17 4797963 4797989 -90474662 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 4 621 279 160 84 9 chr17 4798940 4799000 -90473651 + GA-rich Low_complexity Low_complexity 6 71 0 4 621 1099 63 11 23 chr17 4799000 4799177 -90473474 + (GAA)n Simple_repeat Simple_repeat 3 177 0 4 621 279 160 84 9 chr17 4799177 4799223 -90473428 + polypurine Low_complexity Low_complexity 72 119 0 4 621 349 299 30 38 chr17 4801578 4801710 -90470941 + LTR83 LTR ERVL 248 378 -402 4 621 1702 281 93 11 chr17 4801742 4802400 -90470251 + L1MC1 LINE L1 5420 6131 -202 4 621 266 0 0 29 chr17 4802432 4802467 -90470184 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 621 861 172 0 0 chr17 4802648 4802828 -90469823 + GA-rich Low_complexity Low_complexity 1 180 0 4 621 366 107 0 0 chr17 4802828 4802884 -90469767 + (GGGA)n Simple_repeat Simple_repeat 1 56 0 4 621 267 316 41 0 chr17 4803093 4803191 -90469460 - ORR1E LTR MaLR -2 357 256 4 621 441 0 0 0 chr17 4803585 4803634 -90469017 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 621 881 256 9 95 chr17 4803637 4803952 -90468699 + B4 SINE B4 5 292 0 4 621 391 249 56 120 chr17 4804036 4804275 -90468376 - MLT1E LTR MaLR -406 247 40 4 621 399 21 0 0 chr17 4804515 4804563 -90468088 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 621 527 292 32 7 chr17 4804657 4804812 -90467839 + MTE2b LTR MaLR 5 163 -216 4 621 772 96 42 31 chr17 4804820 4805145 -90467506 + CT-rich Low_complexity Low_complexity 1 328 0 4 621 381 244 111 0 chr17 4805494 4805584 -90467067 + PB1 SINE Alu 21 120 -7 4 621 209 282 0 76 chr17 4805651 4805743 -90466908 + MER5A DNA MER1_type 22 106 -83 4 621 186 43 0 0 chr17 4805974 4805997 -90466654 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 4 621 229 118 0 0 chr17 4806859 4806893 -90465758 + CR1_Mam LINE CR1 871 904 -1300 4 621 392 224 0 18 chr17 4807386 4807495 -90465156 + GA-rich Low_complexity Low_complexity 3 109 0 4 621 440 48 16 0 chr17 4808465 4808528 -90464123 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 4 621 375 104 65 0 chr17 4808665 4808742 -90463909 + CT-rich Low_complexity Low_complexity 3 84 0 4 621 252 0 0 0 chr17 4808839 4808867 -90463784 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 621 502 225 133 23 chr17 4809683 4809856 -90462795 + ID_B1 SINE B4 32 223 -1 4 621 6287 93 155 1 chr17 4810265 4811245 -90461406 + L1_Mus1 LINE L1 4262 5392 -491 4 621 646 13 0 0 chr17 4811243 4811318 -90461333 - L1_Mus1 LINE L1 -611 5956 5882 4 621 4066 72 4 4 chr17 4811313 4811858 -90460793 - L1_Mm LINE L1 -383 5500 4956 4 621 7331 82 5 24 chr17 4811852 4813036 -90459615 + L1_Mus1 LINE L1 5406 6567 0 4 621 1754 169 124 53 chr17 4813073 4813260 -90459391 + RLTR11A2 LTR ERVK 1 227 -300 4 621 405 0 0 0 chr17 4813260 4813305 -90459346 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 621 369 0 0 0 chr17 4813307 4813348 -90459303 + (GA)n Simple_repeat Simple_repeat 1 41 0 5 621 1754 169 124 53 chr17 4813348 4813626 -90459025 + RLTR11A2 LTR ERVK 228 498 -29 4 621 663 86 32 60 chr17 4814523 4814708 -90457943 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 5 621 241 350 29 29 chr17 4816076 4816179 -90456472 + B1F SINE Alu 47 149 0 5 621 817 215 210 26 chr17 4816565 4816832 -90455819 - MTD LTR MaLR -1 418 103 5 621 1168 75 0 0 chr17 4816867 4817014 -90455637 + B1_Mus2 SINE Alu 1 147 0 5 621 654 194 0 0 chr17 4817017 4817190 -90455461 + GA-rich Low_complexity Low_complexity 1 173 0 5 621 2270 266 66 11 chr17 4817294 4818208 -90454443 + L1MA8 LINE L1 4367 5336 -955 5 621 765 245 21 5 chr17 4818211 4818404 -90454247 + B3 SINE B2 15 210 -6 5 621 567 275 43 35 chr17 4818406 4818657 -90453994 + L1MA8 LINE L1 5308 5565 -726 5 621 395 302 105 12 chr17 4818667 4818915 -90453736 + L1MA8 LINE L1 5850 6120 -171 5 621 219 125 0 0 chr17 4818958 4818998 -90453653 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 621 4597 139 111 93 chr17 4819108 4820297 -90452354 - ORR1B1-int LTR MaLR 0 1963 15 5 621 342 67 0 0 chr17 4820297 4820342 -90452309 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 621 4597 137 139 101 chr17 4820342 4820678 -90451973 - ORR1B1-int LTR MaLR -881 1082 718 5 621 1112 52 0 0 chr17 4821355 4821490 -90451161 + B1_Mus1 SINE Alu 2 136 -12 5 621 191 36 0 35 chr17 4821491 4821520 -90451131 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 5 621 817 244 65 0 chr17 4821569 4821770 -90450881 + B3 SINE B2 1 214 -2 5 621 846 30 0 0 chr17 4821781 4821882 -90450769 + (GAA)n Simple_repeat Simple_repeat 2 102 0 5 621 352 379 34 41 chr17 4822067 4822361 -90450290 + B4A SINE B4 1 292 0 5 621 375 78 0 0 chr17 4822392 4822443 -90450208 + (CATA)n Simple_repeat Simple_repeat 4 54 0 5 621 573 15 0 0 chr17 4822843 4822909 -90449742 + (TATG)n Simple_repeat Simple_repeat 2 67 0 5 621 588 349 25 22 chr17 4822999 4823277 -90449374 - B4A SINE B4 -13 279 1 5 621 329 342 57 22 chr17 4823432 4823662 -90448989 + L1M5 LINE L1 2346 2583 -3563 5 621 449 220 10 0 chr17 4826426 4826526 -90446125 + B3 SINE B2 2 102 -114 5 621 376 277 88 45 chr17 4826676 4827031 -90445620 + MLT1D LTR MaLR 103 505 0 5 621 491 282 8 0 chr17 4827185 4827316 -90445335 + ID_B1 SINE B4 87 218 -6 5 621 468 271 6 81 chr17 4827324 4827497 -90445154 + B3A SINE B2 23 182 -16 5 621 311 205 8 43 chr17 4827498 4827615 -90445036 + (CATA)n Simple_repeat Simple_repeat 4 116 0 5 621 700 240 69 39 chr17 4827638 4827789 -90444862 + B3 SINE B2 7 165 -51 5 621 1793 182 39 44 chr17 4827789 4828174 -90444477 - ORR1C2 LTR MaLR -1 383 1 5 621 700 240 69 39 chr17 4828174 4828226 -90444425 + B3 SINE B2 166 216 0 5 621 631 161 174 15 chr17 4828292 4828446 -90444205 + B3 SINE B2 53 214 -2 5 621 261 0 0 0 chr17 4828514 4828543 -90444108 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 621 477 0 0 0 chr17 4828543 4828596 -90444055 + (GA)n Simple_repeat Simple_repeat 1 53 0 5 621 193 171 156 13 chr17 4829544 4829621 -90443030 - L3 LINE CR1 -3541 948 861 5 621 245 254 0 0 chr17 4830532 4830595 -90442056 - L1M3 LINE L1 -1648 4492 4430 5 621 885 230 10 10 chr17 4830658 4830856 -90441795 - B3A SINE B2 0 198 1 5 621 761 287 85 50 chr17 4831214 4831948 -90440703 + L1M3 LINE L1 4908 5675 -499 5 621 597 288 29 37 chr17 4831953 4832246 -90440405 + L1MA9 LINE L1 5616 5825 -487 5 621 344 258 62 41 chr17 4832247 4832344 -90440307 + RSINE1 SINE B4 4 102 -63 5 621 184 122 49 0 chr17 4832390 4832431 -90440220 + (TTAA)n Simple_repeat Simple_repeat 3 45 0 5 621 303 262 148 39 chr17 4832609 4832764 -90439887 + L1MA9 LINE L1 6009 6180 0 5 621 699 283 100 47 chr17 4833016 4833409 -90439242 - MLT2B2 LTR ERVL -50 512 1 5 621 262 0 26 26 chr17 4833978 4834017 -90438634 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 621 386 223 19 10 chr17 4836454 4836558 -90436093 + MLT1A0 LTR MaLR 261 365 0 5 621 231 61 0 0 chr17 4836570 4836603 -90436048 + (TAG)n Simple_repeat Simple_repeat 3 35 0 5 621 655 102 0 10 chr17 4836650 4836749 -90435902 + B1_Mur4 SINE Alu 25 122 -28 5 621 236 290 0 65 chr17 4837317 4837424 -90435227 - ORR1E LTR MaLR -242 117 18 5 621 270 333 55 18 chr17 4837553 4837663 -90434988 - PB1D10 SINE Alu -2 115 2 5 621 451 298 84 45 chr17 4837775 4838109 -90434542 - L1MEg LINE L1 -805 5341 4995 5 621 944 266 81 18 chr17 4838191 4838524 -90434127 + MTD LTR MaLR 52 405 -14 5 621 343 316 123 54 chr17 4838615 4838949 -90433702 - L1MEg LINE L1 -4759 1483 1127 5 621 698 245 50 89 chr17 4839269 4839713 -90432938 - RLTR11B LTR ERVK -27 414 1 5 621 261 274 24 0 chr17 4839762 4839846 -90432805 + MTE2b LTR MaLR 290 375 -4 5 621 23 0 0 0 chr17 4840102 4840125 -90432526 + AT_rich Low_complexity Low_complexity 1 23 0 5 621 314 242 0 11 chr17 4841550 4841642 -90431009 - L1M5 LINE L1 -432 5692 5602 5 621 450 252 33 39 chr17 4841695 4841848 -90430803 - L1M5 LINE L1 -617 5507 5356 5 621 255 330 9 0 chr17 4842122 4842234 -90430417 + (TA)n Simple_repeat Simple_repeat 2 114 0 5 621 652 290 94 51 chr17 4842447 4842723 -90429928 + B4A SINE B4 1 288 -4 5 621 254 215 13 0 chr17 4842739 4842818 -90429833 + (TA)n Simple_repeat Simple_repeat 2 81 0 5 621 1159 267 25 14 chr17 4843116 4843401 -90429250 + B4A SINE B4 3 290 -2 5 621 198 71 0 0 chr17 4843719 4843747 -90428904 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 621 602 283 59 24 chr17 4843835 4844005 -90428646 - B4 SINE B4 -116 176 1 5 621 673 219 7 20 chr17 4844106 4844255 -90428396 - B1_Mur1 SINE Alu 0 149 3 5 621 233 250 8 143 chr17 4844144 4844270 -90428381 - MT2B LTR ERVL -337 264 156 5 621 1029 109 11 6 chr17 4845125 4845166 -90427485 + (TTTC)n Simple_repeat Simple_repeat 1 41 0 5 621 1056 146 0 0 chr17 4845166 4845344 -90427307 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 5 621 1029 109 11 6 chr17 4845344 4845477 -90427174 + (TTTC)n Simple_repeat Simple_repeat 3 136 0 5 621 198 240 0 0 chr17 4845477 4845527 -90427124 + CT-rich Low_complexity Low_complexity 3 52 0 5 621 510 143 29 0 chr17 4847433 4847538 -90425113 + GA-rich Low_complexity Low_complexity 3 110 0 5 621 216 0 0 0 chr17 4847931 4847955 -90424696 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 621 21 0 0 0 chr17 4848236 4848257 -90424394 + AT_rich Low_complexity Low_complexity 1 21 0 5 621 848 150 207 5 chr17 4848746 4848934 -90423717 + URR1A DNA MER1_type 1 226 0 5 77 533 298 112 90 chr17 4849218 4849719 -90422932 + L1MDa LINE L1 31 542 -6091 5 622 917 261 45 19 chr17 4849786 4850105 -90422546 + L1MDa LINE L1 3747 4081 -2456 5 622 373 194 0 26 chr17 4850116 4850260 -90422391 + GA-rich Low_complexity Low_complexity 1 140 0 5 622 671 292 43 46 chr17 4850264 4850425 -90422226 + L1MDa LINE L1 4090 4255 -2282 5 622 2591 49 64 3 chr17 4850425 4850751 -90421900 + ORR1A1 LTR MaLR 1 346 0 5 622 671 292 43 46 chr17 4850751 4850869 -90421782 + L1MDa LINE L1 4256 4368 -2169 5 622 866 270 86 14 chr17 4851013 4851291 -90421360 + MER2 DNA MER2_type 40 337 -8 5 622 1134 312 61 27 chr17 4852113 4852624 -90420027 + L1MB2 LINE L1 5627 6154 -17 5 622 430 284 112 15 chr17 4852644 4852697 -90419954 - B3 SINE B2 0 216 163 5 622 438 20 0 0 chr17 4852697 4852748 -90419903 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 622 430 284 112 15 chr17 4852748 4852891 -90419760 - B3 SINE B2 -54 162 3 5 622 2463 93 158 2 chr17 4852901 4853312 -90419339 - IAPLTR2_Mm LTR ERVK 0 475 1 5 622 216 0 0 0 chr17 4853519 4853543 -90419108 + (A)n Simple_repeat Simple_repeat 1 24 0 5 622 1365 324 80 17 chr17 4854342 4854743 -90417908 + MER21B LTR ERV1 28 456 -407 5 622 909 178 222 0 chr17 4854743 4854928 -90417723 - URR1A DNA MER1_type 0 226 1 5 622 1365 324 80 17 chr17 4854928 4854952 -90417699 + MER21B LTR ERV1 457 479 -384 5 622 210 37 0 0 chr17 4854952 4854979 -90417672 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 622 1365 324 80 17 chr17 4854979 4855199 -90417452 + MER21B LTR ERV1 480 714 -149 5 622 298 279 38 0 chr17 4855225 4855304 -90417347 + PB1D7 SINE Alu 28 109 -11 5 622 1541 211 78 38 chr17 4855467 4855891 -90416760 - RMER19B LTR ERVK -461 441 1 5 622 259 249 261 0 chr17 4856132 4856297 -90416354 - Tigger7 DNA MER2_type -7 2484 2277 5 622 637 259 16 42 chr17 4856350 4856517 -90416134 + MTD LTR MaLR 52 213 -206 5 622 469 294 48 101 chr17 4856517 4856744 -90415907 + B3A SINE B2 2 216 0 5 622 1152 109 0 0 chr17 4856749 4856924 -90415727 + (GGAA)n Simple_repeat Simple_repeat 3 177 0 5 622 232 143 0 0 chr17 4856970 4857005 -90415646 + MTD LTR MaLR 300 334 -85 5 622 183 80 0 0 chr17 4857025 4857050 -90415601 + (CAA)n Simple_repeat Simple_repeat 3 27 0 5 622 614 316 78 0 chr17 4857074 4857305 -90415346 - Tigger7 DNA MER2_type -242 2249 2001 5 622 588 235 78 29 chr17 4857338 4857620 -90415031 - MLT2B4 LTR ERVL -222 298 1 5 622 621 40 0 0 chr17 4858253 4858329 -90414322 + (GA)n Simple_repeat Simple_repeat 1 76 0 5 622 250 358 0 0 chr17 4858856 4858937 -90413714 + MLT1A0 LTR MaLR 54 134 -240 5 622 700 263 134 0 chr17 4858961 4859208 -90413443 + B4A SINE B4 5 284 -8 5 622 264 248 193 9 chr17 4859335 4859449 -90413202 + MLT1A0 LTR MaLR 227 361 -4 5 622 356 248 51 103 chr17 4859846 4859963 -90412688 + B1F2 SINE Alu 15 125 -24 5 622 405 246 138 20 chr17 4860254 4860449 -90412202 + ID_B1 SINE B4 3 220 -4 5 622 340 320 81 39 chr17 4860505 4860840 -90411811 + Charlie22a DNA MER1_type 129 477 -14 5 622 282 262 48 6 chr17 4861544 4861709 -90410942 + (CACCAT)n Simple_repeat Simple_repeat 2 173 0 5 622 219 246 46 40 chr17 4861746 4861920 -90410731 + (CACCAT)n Simple_repeat Simple_repeat 2 176 0 5 622 2508 185 58 21 chr17 4862194 4862289 -90410362 - RLTR20B3 LTR ERVK 0 577 473 5 622 297 0 0 0 chr17 4862289 4862322 -90410329 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 622 2508 185 58 21 chr17 4862322 4862783 -90409868 - RLTR20B3 LTR ERVK -105 472 2 5 622 247 298 0 12 chr17 4863188 4863273 -90409378 + PB1 SINE Alu 25 108 -19 5 622 257 288 17 0 chr17 4863538 4863597 -90409054 + ID2 SINE ID 8 67 -16 5 622 423 275 44 38 chr17 4863620 4863764 -90408887 + RSINE1 SINE B4 4 149 -16 5 622 1086 100 0 0 chr17 4863764 4863944 -90408707 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 622 423 275 44 38 chr17 4863944 4863958 -90408693 + RSINE1 SINE B4 150 163 -2 5 622 886 221 62 0 chr17 4864043 4864238 -90408413 + B3 SINE B2 7 213 -3 6 622 1862 134 56 52 chr17 4866621 4866862 -90405789 + RMER17C LTR ERVK 1 234 -176 6 622 729 34 0 0 chr17 4866862 4866950 -90405701 + (TC)n Simple_repeat Simple_repeat 2 89 0 6 622 1862 134 56 52 chr17 4866950 4867116 -90405535 + RMER17C LTR ERVK 235 410 0 6 622 203 299 0 29 chr17 4867931 4868000 -90404651 + CT-rich Low_complexity Low_complexity 4 70 0 6 622 690 299 165 18 chr17 4869475 4869815 -90402836 + ERVL-E-int LTR ERVL 69 458 -5209 6 622 903 238 38 62 chr17 4870307 4870598 -90402053 - MTE2b LTR MaLR -83 296 13 6 622 283 300 144 34 chr17 4870618 4871029 -90401622 + ERVL-E-int LTR ERVL 1081 1536 -4131 6 622 595 199 0 0 chr17 4872149 4872280 -90400371 - URR1B DNA MER1_type 0 225 95 6 622 921 264 105 35 chr17 4872412 4872785 -90399866 + Lx8 LINE L1 6968 7366 -107 6 622 369 0 0 0 chr17 4872798 4872839 -90399812 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 6 622 315 0 0 0 chr17 4874089 4874124 -90398527 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 622 394 126 39 62 chr17 4874562 4874740 -90397911 + (CACAC)n Simple_repeat Simple_repeat 1 174 0 6 622 592 77 53 8 chr17 4874804 4874935 -90397716 + (CA)n Simple_repeat Simple_repeat 1 137 0 6 622 330 284 7 90 chr17 4875114 4875269 -90397382 + MER5B DNA MER1_type 6 147 -31 6 622 470 266 91 61 chr17 4878074 4878338 -90394313 + B4 SINE B4 2 273 -19 6 622 26 0 0 0 chr17 4878417 4878443 -90394208 + AT_rich Low_complexity Low_complexity 1 26 0 6 622 406 255 164 116 chr17 4878766 4879041 -90393610 + L1MCa LINE L1 520 807 -5944 6 622 22 0 0 0 chr17 4879514 4879536 -90393115 + AT_rich Low_complexity Low_complexity 1 22 0 6 622 335 23 0 22 chr17 4879558 4879603 -90393048 + (TAA)n Simple_repeat Simple_repeat 1 44 0 6 622 291 304 111 27 chr17 4879628 4880034 -90392617 + L1MCa LINE L1 995 1520 -5231 6 622 274 237 59 34 chr17 4880072 4880190 -90392461 + L1MCa LINE L1 1664 1784 -4967 6 622 391 322 39 39 chr17 4880195 4880373 -90392278 + ORR1E LTR MaLR 6 183 -176 6 622 246 292 56 0 chr17 4880468 4880540 -90392111 + ORR1E LTR MaLR 290 365 -14 6 622 660 242 87 17 chr17 4881345 4881576 -90391075 + L1MCa LINE L1 1822 2068 -4683 6 622 364 266 148 9 chr17 4881714 4881930 -90390721 + L1MCa LINE L1 2270 2515 -4236 6 622 668 300 58 22 chr17 4881985 4882346 -90390305 + L1MCa LINE L1 2652 3025 -3539 6 622 585 162 250 51 chr17 4882346 4882522 -90390129 + B3 SINE B2 6 216 0 6 622 927 258 108 86 chr17 4882538 4882723 -90389928 + L1MCa LINE L1 4578 4802 -1762 6 622 564 210 32 16 chr17 4882723 4882849 -90389802 + B1_Mus2 SINE Alu 3 130 -17 6 622 927 258 108 86 chr17 4882849 4882907 -90389744 + L1MCa LINE L1 4803 4823 -1741 6 622 210 71 0 0 chr17 4882907 4882935 -90389716 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 622 927 258 108 86 chr17 4882935 4883225 -90389426 + L1MCa LINE L1 4824 5124 -1440 6 622 730 234 86 0 chr17 4883284 4883481 -90389170 + MT2A LTR ERVL 2 215 -318 6 622 816 162 7 9 chr17 4883487 4883912 -90388739 + (TG)n Simple_repeat Simple_repeat 1 424 0 6 622 287 86 0 0 chr17 4883913 4883971 -90388680 + MT2A LTR ERVL 474 531 -2 6 622 346 227 0 0 chr17 4884817 4884883 -90387768 + PB1D10 SINE Alu 1 66 -51 6 622 848 218 68 15 chr17 4884893 4885098 -90387553 + B3 SINE B2 1 216 0 6 622 201 182 0 0 chr17 4885139 4885194 -90387457 + GA-rich Low_complexity Low_complexity 1 55 0 6 622 293 313 124 32 chr17 4885256 4885474 -90387177 - MLT1H2-int LTR MaLR -383 1026 789 6 622 393 22 0 0 chr17 4885709 4885755 -90386896 + (TC)n Simple_repeat Simple_repeat 1 46 0 6 622 906 277 162 55 chr17 4885766 4886327 -90386324 - MLT1H2-int LTR MaLR -687 722 102 6 622 210 37 0 0 chr17 4886361 4886388 -90386263 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 622 237 270 33 11 chr17 4886405 4886495 -90386156 - MLT1H2 LTR MaLR -8 481 390 6 622 963 278 124 4 chr17 4886523 4886990 -90385661 + MT2A LTR ERVL 1 523 -10 6 622 1381 200 40 25 chr17 4887293 4887647 -90385004 - RLTR10D LTR ERVK 0 359 1 6 622 375 23 0 0 chr17 4888125 4888169 -90384482 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 622 321 26 0 0 chr17 4888169 4888207 -90384444 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 622 506 238 23 23 chr17 4888719 4888848 -90383803 + RSINE1 SINE B4 3 131 -34 6 622 180 97 0 0 chr17 4888863 4888894 -90383757 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 622 229 239 81 40 chr17 4888949 4889023 -90383628 + L1MB1 LINE L1 5939 6015 -153 6 622 488 318 0 31 chr17 4889120 4889279 -90383372 - RSINE1 SINE B4 -9 156 3 6 622 3074 191 76 63 chr17 4889289 4890453 -90382198 - RMER1B Other Other -2 1064 47 6 622 4104 140 86 67 chr17 4890460 4891335 -90381316 - RMER19B LTR ERVK -10 892 2 6 622 255 258 0 0 chr17 4891460 4891526 -90381125 + L1MB4 LINE L1 6114 6179 -1 6 622 254 251 256 20 chr17 4892652 4892847 -90379804 - RLTR15 LTR ERVK 0 359 119 6 622 439 243 60 78 chr17 4892831 4893015 -90379636 - RLTR15 LTR ERVK -131 228 54 6 622 288 0 0 0 chr17 4893015 4893047 -90379604 + (TTG)n Simple_repeat Simple_repeat 2 33 0 6 622 439 243 60 78 chr17 4893047 4893059 -90379592 - RLTR15 LTR ERVK -306 53 46 6 622 207 0 0 0 chr17 4893059 4893082 -90379569 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 6 622 439 243 60 78 chr17 4893082 4893116 -90379535 - RLTR15 LTR ERVK -314 45 1 6 622 726 241 106 0 chr17 4893349 4893548 -90379103 - B4A SINE B4 -72 220 1 6 622 273 186 67 17 chr17 4893974 4894034 -90378617 + MER2 DNA MER2_type 276 338 -7 6 622 32679 104 9 17 chr17 4894591 4900916 -90371735 + L1_Mus1 LINE L1 262 6567 0 6 622 245 0 0 0 chr17 4900924 4900954 -90371697 + MusHAL1 LINE L1 1793 1822 -890 6 622 1361 209 120 14 chr17 4901388 4901737 -90370914 - MTD LTR MaLR -28 391 6 6 622 740 284 109 55 chr17 4901789 4901856 -90370795 + Lx9 LINE L1 6120 6193 -1280 6 622 336 48 0 0 chr17 4901856 4901898 -90370753 + (TTAG)n Simple_repeat Simple_repeat 3 44 0 6 622 844 150 21 14 chr17 4901901 4902043 -90370608 - B1_Mur4 SINE Alu -7 143 1 6 622 921 287 107 45 chr17 4902043 4902450 -90370201 + Lx9 LINE L1 6194 6772 -872 6 622 376 268 17 25 chr17 4902847 4903004 -90369647 - MLT1A1 LTR MaLR 0 408 210 6 622 704 255 46 5 chr17 4903564 4903761 -90368890 + B3 SINE B2 1 205 -11 6 622 321 77 15 44 chr17 4903761 4903829 -90368822 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 6 622 195 320 78 20 chr17 4903980 4904082 -90368569 - MIRb SINE MIR -52 216 109 6 622 298 259 139 85 chr17 4904299 4904564 -90368087 + B4 SINE B4 40 276 -16 6 622 1247 48 0 0 chr17 4904653 4904800 -90367851 + B1_Mm SINE Alu 1 147 0 6 622 405 310 22 37 chr17 4904863 4904997 -90367654 + ID_B1 SINE B4 93 224 0 6 622 419 235 68 17 chr17 4904882 4904999 -90367652 + B1F SINE Alu 27 149 0 6 622 748 219 37 37 chr17 4905023 4905293 -90367358 + RMER19B LTR ERVK 1 300 -602 6 622 2545 154 59 30 chr17 4905312 4905840 -90366811 + RMER19B LTR ERVK 354 896 -6 6 622 304 155 0 27 chr17 4905968 4906041 -90366610 + T-rich Low_complexity Low_complexity 2 72 0 6 622 302 111 0 0 chr17 4906208 4906253 -90366398 + RMER30 DNA MER1_type 7 51 -151 6 622 243 293 0 26 chr17 4907299 4907376 -90365275 + CT-rich Low_complexity Low_complexity 4 78 0 6 622 243 0 0 0 chr17 4907677 4907704 -90364947 + (T)n Simple_repeat Simple_repeat 1 27 0 6 622 240 59 39 19 chr17 4907738 4907790 -90364861 + (TTTTTA)n Simple_repeat Simple_repeat 2 54 0 6 622 34 72 0 0 chr17 4908175 4908244 -90364407 + GC_rich Low_complexity Low_complexity 1 69 0 6 622 277 214 9 101 chr17 4909001 4909110 -90363541 - ID4 SINE ID -51 101 3 6 622 898 200 132 0 chr17 4909922 4910112 -90362539 + B3 SINE B2 2 216 0 6 622 1002 276 24 0 chr17 4910132 4910378 -90362273 + B4 SINE B4 1 252 -40 6 622 1261 129 124 0 chr17 4910653 4910854 -90361797 + URR1A DNA MER1_type 1 226 0 6 622 405 238 89 39 chr17 4910916 4911095 -90361556 + RLTR15 LTR ERVK 1 188 -171 6 622 22 0 0 0 chr17 4911342 4911364 -90361287 + AT_rich Low_complexity Low_complexity 1 22 0 6 622 304 326 67 25 chr17 4911744 4911961 -90360690 + MIRc SINE MIR 26 247 -21 6 622 547 234 126 76 chr17 4912685 4912865 -90359786 - B4 SINE B4 -15 277 87 6 622 465 62 0 0 chr17 4912865 4912930 -90359721 + (TTGG)n Simple_repeat Simple_repeat 2 66 0 6 622 547 234 126 76 chr17 4912930 4913012 -90359639 - B4 SINE B4 -206 86 4 6 622 215 228 59 71 chr17 4913358 4913443 -90359208 + PB1D9 SINE Alu 36 119 -1 6 622 502 279 13 39 chr17 4914520 4914673 -90357978 + B1F SINE Alu 1 149 0 6 622 496 248 62 0 chr17 4914998 4915111 -90357540 + B1F SINE Alu 1 120 -29 6 622 203 131 21 21 chr17 4915118 4915165 -90357486 + (TTG)n Simple_repeat Simple_repeat 3 49 0 6 622 23 33 0 0 chr17 4915168 4915198 -90357453 + AT_rich Low_complexity Low_complexity 1 30 0 6 622 682 285 100 74 chr17 4915265 4915644 -90357007 - MLT1B LTR MaLR 0 390 2 6 622 533 185 18 9 chr17 4915686 4915795 -90356856 + MTEb LTR MaLR 18 127 -252 6 622 577 253 124 0 chr17 4915806 4915992 -90356659 + MTEb LTR MaLR 170 378 -1 6 622 1056 297 104 67 chr17 4915993 4916213 -90356438 + Charlie2b DNA MER1_type 1828 2068 -714 6 622 216 0 0 0 chr17 4916213 4916237 -90356414 + (TAAAA)n Simple_repeat Simple_repeat 5 28 0 6 622 1056 297 104 67 chr17 4916237 4916354 -90356297 + Charlie2b DNA MER1_type 2069 2170 -612 6 622 872 194 194 0 chr17 4916354 4916534 -90356117 + B3 SINE B2 2 216 0 6 622 1056 297 104 67 chr17 4916534 4917058 -90355593 + Charlie2b DNA MER1_type 2171 2721 -61 6 622 503 303 69 0 chr17 4917084 4917229 -90355422 - RSINE1 SINE B4 -8 157 3 6 622 925 172 10 50 chr17 4917325 4917527 -90355124 - B2_Mm2 SINE B2 -1 194 1 6 622 774 318 182 18 chr17 4917701 4918152 -90354499 + Lx8 LINE L1 6949 7473 0 6 622 646 307 83 12 chr17 4918308 4918644 -90354007 + L1MB2 LINE L1 5578 5937 -234 6 622 371 246 111 42 chr17 4918837 4918981 -90353670 + RMER15 LTR ERVL 299 452 -123 6 622 237 262 159 15 chr17 4919262 4919394 -90353257 + MIRb SINE MIR 51 201 -67 6 622 316 286 182 20 chr17 4919869 4920072 -90352579 + L2a LINE L2 3190 3425 -1 6 622 281 224 0 17 chr17 4921068 4921127 -90351524 + ID4_ SINE ID 23 80 -3 6 622 210 282 28 14 chr17 4921127 4921140 -90351511 + ID_B1 SINE B4 24 96 -128 6 622 336 322 21 14 chr17 4921505 4921650 -90351001 - RSINE1 SINE B4 -19 146 1 6 622 576 256 45 16 chr17 4921718 4921922 -90350729 + B3 SINE B2 3 211 -5 6 622 453 224 184 55 chr17 4923406 4923607 -90349044 + RLTR11B LTR ERVK 1 241 -212 6 622 948 35 0 0 chr17 4923607 4923723 -90348928 + (GAGAA)n Simple_repeat Simple_repeat 1 116 0 6 622 453 270 102 50 chr17 4923723 4923892 -90348759 + RLTR11B LTR ERVK 242 414 -27 6 622 219 294 14 56 chr17 4924019 4924091 -90348560 + ID4_ SINE ID 1 69 -14 7 622 244 246 0 0 chr17 4924220 4924281 -90348370 + PB1D10 SINE Alu 30 90 -27 7 622 459 0 0 0 chr17 4924295 4924346 -90348305 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 622 5447 182 72 32 chr17 4924503 4925555 -90347096 + Lx9 LINE L1 6307 7388 -256 7 622 2558 71 3 0 chr17 4925555 4925879 -90346772 - ORR1A2 LTR MaLR -2 325 1 7 622 5447 188 272 19 chr17 4925879 4926072 -90346579 + Lx9 LINE L1 7389 7643 -1 7 622 22 0 0 0 chr17 4926075 4926097 -90346554 + AT_rich Low_complexity Low_complexity 1 22 0 7 622 226 111 36 36 chr17 4926823 4926879 -90345772 + GA-rich Low_complexity Low_complexity 5 60 0 7 622 255 61 0 0 chr17 4927827 4927860 -90344791 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 7 622 1871 76 130 7 chr17 4927867 4928160 -90344491 + ORR1A4 LTR MaLR 1 329 0 7 622 1022 255 44 30 chr17 4928198 4928469 -90344182 - B4A SINE B4 -17 275 1 7 622 448 222 523 0 chr17 4928471 4928616 -90344035 - ID_B1 SINE B4 -1 223 3 7 622 771 287 90 8 chr17 4928976 4929232 -90343419 + B4 SINE B4 12 288 -4 7 622 214 283 0 0 chr17 4929527 4929580 -90343071 - ID4 SINE ID -2 81 29 7 622 328 290 94 70 chr17 4929903 4930180 -90342471 + B4A SINE B4 1 292 0 7 622 282 321 0 0 chr17 4930183 4930267 -90342384 + (CA)n Simple_repeat Simple_repeat 2 85 0 7 622 303 236 12 25 chr17 4930267 4930428 -90342223 + (CATATA)n Simple_repeat Simple_repeat 6 164 0 7 622 244 267 13 13 chr17 4930397 4930549 -90342102 + (CATA)n Simple_repeat Simple_repeat 4 155 0 7 622 216 273 0 0 chr17 4930592 4930691 -90341960 + (CA)n Simple_repeat Simple_repeat 2 100 0 7 622 203 252 15 22 chr17 4930714 4930848 -90341803 + (CATA)n Simple_repeat Simple_repeat 4 136 0 7 622 243 354 0 0 chr17 4930850 4930932 -90341719 + (CA)n Simple_repeat Simple_repeat 1 82 0 7 622 284 328 66 59 chr17 4931079 4931215 -90341436 + MLT1I LTR MaLR 154 290 -121 7 622 233 307 34 11 chr17 4931418 4931507 -90341144 - MLT1B LTR MaLR -96 294 204 7 622 837 92 0 0 chr17 4931513 4931633 -90341018 + (GA)n Simple_repeat Simple_repeat 1 120 0 7 622 257 259 86 0 chr17 4931679 4931760 -90340891 + Lx8 LINE L1 7184 7271 -202 7 622 353 264 186 99 chr17 4931879 4931943 -90340708 - RMER5 LTR ERV1 -246 288 225 7 622 2597 142 40 85 chr17 4931943 4932495 -90340156 - RLTR11A2 LTR ERVK 0 527 1 7 622 353 264 186 99 chr17 4932495 4932682 -90339969 - RMER5 LTR ERV1 -310 224 15 7 622 420 294 120 82 chr17 4932721 4933062 -90339589 - ORR1E LTR MaLR -5 354 1 7 622 462 318 68 11 chr17 4933139 4933392 -90339259 + B4A SINE B4 14 292 0 7 622 292 257 119 0 chr17 4933558 4933667 -90338984 - RCHARR1 DNA MER1_type 0 974 853 7 622 546 106 12 0 chr17 4933668 4933753 -90338898 + Lx5 LINE L1 5924 6009 -1041 7 622 986 158 118 15 chr17 4933768 4934090 -90338561 - RCHARR1 DNA MER1_type -121 853 499 7 622 844 286 15 0 chr17 4934185 4934388 -90338263 + B4A SINE B4 85 290 -2 7 622 305 270 5 0 chr17 4934391 4934605 -90338046 + (CA)n Simple_repeat Simple_repeat 1 215 0 7 622 381 380 35 10 chr17 4934632 4934834 -90337817 - MER63A DNA AcHobo -3 207 1 7 622 238 304 86 102 chr17 4934907 4935094 -90337557 - B4 SINE B4 -17 275 92 7 622 1076 132 196 0 chr17 4935454 4935643 -90337008 + URR1A DNA MER1_type 1 226 0 7 622 825 47 0 0 chr17 4935788 4935894 -90336757 - B1_Mus2 SINE Alu -8 139 34 7 622 22 0 0 0 chr17 4935996 4936018 -90336633 + AT_rich Low_complexity Low_complexity 1 22 0 7 622 559 246 32 69 chr17 4936127 4936315 -90336336 + B3A SINE B2 2 182 -16 7 622 715 144 25 21 chr17 4936320 4936566 -90336085 + (CATA)n Simple_repeat Simple_repeat 1 247 0 7 622 297 0 0 0 chr17 4936814 4936847 -90335804 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 622 621 0 0 0 chr17 4937008 4937077 -90335574 + (GGGAA)n Simple_repeat Simple_repeat 2 70 0 7 622 855 250 19 0 chr17 4937186 4937398 -90335253 + B3 SINE B2 1 216 0 7 622 1351 181 71 8 chr17 4937971 4938238 -90334413 - ORR1B2 LTR MaLR 0 367 84 7 622 613 256 87 106 chr17 4938415 4938782 -90333869 - MTEa LTR MaLR -8 371 12 7 622 353 176 0 13 chr17 4939063 4939138 -90333513 + GA-rich Low_complexity Low_complexity 2 75 0 7 622 682 176 106 8 chr17 4939676 4939808 -90332843 + B1_Mur2 SINE Alu 4 148 -1 7 622 1326 86 11 16 chr17 4939811 4940000 -90332651 + B2_Mm1t SINE B2 2 189 -4 7 622 330 26 0 0 chr17 4940920 4940959 -90331692 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 7 622 450 0 0 0 chr17 4941240 4941290 -90331361 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 622 333 0 0 0 chr17 4941387 4941424 -90331227 + (GA)n Simple_repeat Simple_repeat 2 38 0 7 622 189 0 0 0 chr17 4941521 4941542 -90331109 + (TCCC)n Simple_repeat Simple_repeat 3 23 0 7 622 909 230 42 33 chr17 4942065 4942402 -90330249 - RLTR15 LTR ERVK -19 340 1 7 622 543 281 162 6 chr17 4942487 4942666 -90329985 + B4 SINE B4 4 210 -82 7 622 263 237 13 38 chr17 4942947 4943026 -90329625 + L1M5 LINE L1 5808 5884 -240 7 622 329 310 7 100 chr17 4943036 4943176 -90329475 + RSINE1 SINE B4 2 128 -37 7 622 324 0 0 0 chr17 4943183 4943219 -90329432 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 622 189 0 0 0 chr17 4943304 4943325 -90329326 + (GTTTG)n Simple_repeat Simple_repeat 2 22 0 7 622 785 172 0 40 chr17 4943325 4943465 -90329186 - B1_Mus2 SINE Alu -9 138 2 7 622 511 60 0 23 chr17 4943478 4943564 -90329087 + (GTTTG)n Simple_repeat Simple_repeat 1 84 0 7 622 1098 70 42 0 chr17 4943564 4943706 -90328945 - B1_Mus1 SINE Alu 0 148 1 7 622 234 233 14 14 chr17 4943926 4944000 -90328651 + (TA)n Simple_repeat Simple_repeat 2 75 0 7 622 236 149 21 0 chr17 4944098 4944145 -90328506 + (CA)n Simple_repeat Simple_repeat 1 48 0 7 622 295 176 0 0 chr17 4944335 4944386 -90328265 - B3A SINE B2 -147 51 1 7 622 956 151 7 7 chr17 4944485 4944632 -90328019 + B1_Mus1 SINE Alu 2 148 0 7 622 581 273 87 11 chr17 4944870 4945055 -90327596 - B3 SINE B2 0 216 18 7 622 763 86 17 0 chr17 4946345 4946462 -90326189 + (TC)n Simple_repeat Simple_repeat 2 120 0 7 622 534 70 0 0 chr17 4946518 4946589 -90326062 + (CA)n Simple_repeat Simple_repeat 1 71 0 7 622 773 167 7 0 chr17 4947300 4947450 -90325201 + CT-rich Low_complexity Low_complexity 3 153 0 7 622 234 62 0 0 chr17 4947792 4947824 -90324827 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 7 622 459 0 0 0 chr17 4947867 4947918 -90324733 + (GA)n Simple_repeat Simple_repeat 1 51 0 7 622 483 296 216 4 chr17 4949676 4949903 -90322748 + B4 SINE B4 4 278 -14 7 622 351 0 0 0 chr17 4949933 4949972 -90322679 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 622 1138 167 73 37 chr17 4950362 4950580 -90322071 + URR1A DNA MER1_type 1 226 0 7 622 25 0 0 0 chr17 4951175 4951200 -90321451 + AT_rich Low_complexity Low_complexity 1 25 0 7 622 1270 230 129 11 chr17 4952449 4952822 -90319829 - MTD LTR MaLR 0 419 3 7 622 379 292 96 30 chr17 4952876 4953153 -90319498 - L1M4 LINE L1 -458 5704 5409 7 622 1110 122 0 0 chr17 4953153 4953333 -90319318 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 622 379 299 105 33 chr17 4953333 4953450 -90319201 - L1M4 LINE L1 -766 5408 5284 7 622 424 232 194 7 chr17 4953619 4953758 -90318893 + RSINE1 SINE B4 1 165 0 7 622 755 184 12 81 chr17 4953902 4954062 -90318589 + B1_Mur2 SINE Alu 1 149 0 7 622 333 100 0 0 chr17 4955489 4955539 -90317112 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 622 362 100 17 0 chr17 4955701 4955761 -90316890 + (TA)n Simple_repeat Simple_repeat 2 62 0 7 622 687 218 198 16 chr17 4955761 4955936 -90316715 - B3 SINE B2 -7 209 1 7 622 866 236 21 5 chr17 4955954 4956146 -90316505 - B3A SINE B2 -1 197 3 7 622 549 281 125 24 chr17 4956150 4956358 -90316293 - B4 SINE B4 -63 229 1 7 622 332 394 17 0 chr17 4957458 4957633 -90315018 + MIR SINE MIR 79 256 -6 7 622 766 137 7 7 chr17 4957658 4957805 -90314846 + (TA)n Simple_repeat Simple_repeat 1 147 0 7 622 715 304 27 9 chr17 4958077 4958299 -90314352 + B4 SINE B4 3 228 -64 7 622 26 0 0 0 chr17 4958748 4958774 -90313877 + AT_rich Low_complexity Low_complexity 1 26 0 7 622 211 194 27 40 chr17 4959795 4959870 -90312781 + (TATAA)n Simple_repeat Simple_repeat 5 78 0 7 622 277 333 0 0 chr17 4960014 4960083 -90312568 - ID_B1 SINE B4 -66 158 90 7 622 499 269 81 16 chr17 4961166 4961351 -90311300 - ID_B1 SINE B4 -8 216 20 7 622 333 0 0 0 chr17 4962041 4962078 -90310573 + (A)n Simple_repeat Simple_repeat 1 37 0 7 622 1137 261 52 22 chr17 4962094 4962462 -90310189 + MTEb LTR MaLR 1 379 0 7 622 300 250 119 46 chr17 4962462 4962571 -90310080 - MLT1B LTR MaLR -39 351 235 7 622 321 257 73 7 chr17 4962593 4962730 -90309921 - MLT2B4 LTR ERVL -410 146 1 7 622 630 264 6 24 chr17 4963288 4963455 -90309196 + RSINE1 SINE B4 2 165 0 7 622 538 255 86 40 chr17 4963572 4963723 -90308928 + RSINE1 SINE B4 2 159 -6 7 622 394 135 48 0 chr17 4963735 4963839 -90308812 + (TA)n Simple_repeat Simple_repeat 2 110 0 7 622 306 50 0 0 chr17 4963839 4963879 -90308772 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 622 826 130 92 0 chr17 4963898 4964029 -90308622 - B1_Mur1 SINE Alu -6 143 1 7 622 1889 133 10 73 chr17 4964631 4965016 -90307635 + ORR1B1 LTR MaLR 1 394 0 8 622 485 261 60 0 chr17 4965056 4965190 -90307461 - B4 SINE B4 -83 209 68 8 622 541 225 47 0 chr17 4965395 4965524 -90307127 + B3A SINE B2 20 154 -44 8 622 405 0 0 0 chr17 4965524 4965569 -90307082 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 622 279 133 0 0 chr17 4965571 4965616 -90307035 + (GA)n Simple_repeat Simple_repeat 2 46 0 8 622 915 168 14 0 chr17 4965694 4965837 -90306814 - B1_Mur4 SINE Alu -5 145 1 8 622 556 194 4 4 chr17 4965864 4966101 -90306550 + (TG)n Simple_repeat Simple_repeat 1 237 0 8 622 309 257 0 0 chr17 4966167 4966237 -90306414 - ID2 SINE ID -8 75 6 8 622 789 69 44 44 chr17 4966534 4966671 -90305980 - URR1A DNA MER1_type -8 218 82 8 622 204 40 0 0 chr17 4966895 4966920 -90305731 + (CTTAT)n Simple_repeat Simple_repeat 2 26 0 8 622 229 258 30 61 chr17 4967515 4967614 -90305037 + PB1D10 SINE Alu 1 96 -21 8 622 560 272 65 82 chr17 4967620 4967912 -90304739 + B4A SINE B4 3 289 -3 8 622 266 148 19 0 chr17 4967928 4967982 -90304669 + (CATA)n Simple_repeat Simple_repeat 4 58 0 8 622 736 209 0 11 chr17 4968359 4968538 -90304113 + CT-rich Low_complexity Low_complexity 2 178 0 8 622 778 142 8 8 chr17 4968550 4968678 -90303973 - B1_Mus2 SINE Alu -11 136 9 8 622 576 183 0 0 chr17 4968709 4968813 -90303838 + MTEa LTR MaLR 1 104 -275 8 622 537 91 0 20 chr17 4968823 4968924 -90303727 + L1Md_F3 LINE L1 6486 6584 0 8 622 592 269 113 16 chr17 4968924 4969244 -90303407 + ORR1D2 LTR MaLR 11 373 -1 8 622 964 221 55 40 chr17 4969247 4969521 -90303130 + MTEb LTR MaLR 102 379 0 8 622 876 255 9 9 chr17 4970473 4970691 -90301960 + ID_B1 SINE B4 1 218 -6 8 622 229 286 32 0 chr17 4970879 4970942 -90301709 + L1M5 LINE L1 5541 5605 -519 8 622 184 233 23 0 chr17 4971769 4971812 -90300839 + L4 LINE RTE 542 585 -1444 8 622 225 232 54 0 chr17 4971851 4971907 -90300744 - RSINE1 SINE B4 -38 127 69 8 622 599 236 127 6 chr17 4972807 4972965 -90299686 + B3 SINE B2 15 191 -25 8 622 1193 35 7 0 chr17 4973242 4973386 -90299265 + B1_Mm SINE Alu 3 147 0 8 622 758 267 32 53 chr17 4973507 4973792 -90298859 - B4A SINE B4 -12 280 2 8 622 267 189 0 0 chr17 4974060 4974113 -90298538 + (TG)n Simple_repeat Simple_repeat 1 53 0 8 622 337 341 15 80 chr17 4974113 4974250 -90298401 - RSINE1 SINE B4 0 165 38 8 622 213 39 0 0 chr17 4974255 4974281 -90298370 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 8 622 229 286 39 0 chr17 4974467 4974544 -90298107 - L1MEe LINE L1 -3985 869 790 8 622 252 0 0 0 chr17 4975159 4975187 -90297464 + (CAA)n Simple_repeat Simple_repeat 3 30 0 8 622 340 209 32 95 chr17 4975405 4975416 -90297235 + MT2B LTR ERVL 152 156 -445 8 622 504 207 0 0 chr17 4975416 4975503 -90297148 + B1_Mur3 SINE Alu 2 88 -61 8 622 860 19 0 0 chr17 4975515 4975623 -90297028 - B1_Mus1 SINE Alu -1 147 40 8 622 180 0 0 0 chr17 4975689 4975709 -90296942 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 8 622 737 261 13 40 chr17 4976154 4976378 -90296273 - B4 SINE B4 -74 218 1 8 622 326 261 34 0 chr17 4976487 4976561 -90296090 + B1F2 SINE Alu 40 116 -33 8 622 767 249 53 43 chr17 4976561 4976884 -90295767 - RLTR15 LTR ERVK -1 358 33 8 622 415 295 140 38 chr17 4977234 4977498 -90295153 - L1ME3B LINE L1 -332 5908 5618 8 622 274 269 43 0 chr17 4977651 4977744 -90294907 - L1M4 LINE L1 -820 5326 5230 8 622 1438 200 190 137 chr17 4977881 4978386 -90294265 - MT2A LTR ERVL 0 533 2 8 622 210 91 0 0 chr17 4978489 4978522 -90294129 + (TG)n Simple_repeat Simple_repeat 2 34 0 8 622 656 327 22 33 chr17 4978522 4978794 -90293857 - B4A SINE B4 -23 269 1 8 622 577 253 0 83 chr17 4979006 4979174 -90293477 + RSINE1 SINE B4 12 165 0 8 622 29 28 0 0 chr17 4979185 4979221 -90293430 + AT_rich Low_complexity Low_complexity 1 36 0 8 622 249 314 39 31 chr17 4979451 4979579 -90293072 + ID_B1 SINE B4 86 214 -10 8 622 234 206 63 0 chr17 4979524 4979587 -90293064 + B1F SINE Alu 81 147 -2 8 622 1362 267 11 33 chr17 4980179 4980547 -90292104 + ORR1D2 LTR MaLR 11 370 0 8 622 476 255 0 19 chr17 4980621 4980725 -90291926 + PB1D10 SINE Alu 1 102 -15 8 623 2619 287 97 24 chr17 4980816 4981834 -90290817 + Lx8 LINE L1 6225 7317 -156 8 623 225 0 0 0 chr17 4982482 4982507 -90290144 + (TC)n Simple_repeat Simple_repeat 2 26 0 8 623 1151 43 35 0 chr17 4983239 4983380 -90289271 + B1_Mm SINE Alu 2 147 0 8 623 369 0 0 0 chr17 4983380 4983421 -90289230 + (A)n Simple_repeat Simple_repeat 1 41 0 8 623 617 83 174 0 chr17 4983441 4983550 -90289101 + B1_Mm SINE Alu 7 134 -13 8 623 1072 78 35 0 chr17 4983556 4983698 -90288953 - B1_Mus1 SINE Alu 0 148 2 8 623 613 332 39 42 chr17 4983794 4984077 -90288574 - B4A SINE B4 0 292 11 8 623 289 254 0 0 chr17 4984150 4984217 -90288434 - ID4_ SINE ID -16 67 1 8 623 294 122 0 20 chr17 4984561 4984611 -90288040 - ID_B1 SINE B4 -1 223 175 8 623 209 125 0 24 chr17 4984613 4984654 -90287997 + (TTTG)n Simple_repeat Simple_repeat 4 43 0 8 623 1161 43 0 0 chr17 4984665 4984803 -90287848 - B1_Mus2 SINE Alu -9 138 1 8 623 445 241 129 0 chr17 4984804 4984920 -90287731 - ID_B1 SINE B4 -59 165 35 8 623 336 167 0 32 chr17 4985566 4985628 -90287023 + B1_Mur4 SINE Alu 1 60 -90 8 623 254 0 0 159 chr17 4985629 4985755 -90286896 + (CAGAG)n Simple_repeat Simple_repeat 5 110 0 8 623 365 191 74 63 chr17 4985758 4985812 -90286839 + B1_Mur4 SINE Alu 43 94 -56 8 623 1551 148 11 84 chr17 4985812 4986159 -90286492 - RLTRETN_Mm LTR ERVK 0 322 1 8 623 365 191 74 63 chr17 4986159 4986199 -90286452 + B1_Mur4 SINE Alu 95 137 -13 8 623 192 40 0 0 chr17 4986199 4986224 -90286427 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 8 623 630 232 28 7 chr17 4987978 4988121 -90284530 - B1_Mur1 SINE Alu -2 147 2 8 623 501 247 46 46 chr17 4988149 4988302 -90284349 - MTD LTR MaLR -13 406 254 8 623 269 296 0 0 chr17 4988303 4988374 -90284277 - MTD LTR MaLR -348 71 1 8 623 1002 200 5 37 chr17 4989118 4989336 -90283315 + B3 SINE B2 1 211 -5 8 623 425 218 0 0 chr17 4990034 4990112 -90282539 - ID4_ SINE ID -3 80 3 8 623 238 340 89 10 chr17 4990120 4990221 -90282430 - PB1D10 SINE Alu -7 110 2 8 623 2540 24 13 0 chr17 4992507 4992805 -90279846 + L1Md_F2 LINE L1 6279 6580 -2 8 623 257 155 17 0 chr17 4994434 4994492 -90278159 + GA-rich Low_complexity Low_complexity 2 60 0 8 623 30 27 0 0 chr17 4994568 4994605 -90278046 + GC_rich Low_complexity Low_complexity 1 37 0 8 623 214 274 11 35 chr17 4994716 4994890 -90277761 + (CGG)n Simple_repeat Simple_repeat 3 172 0 8 623 413 135 11 0 chr17 4995152 4995241 -90277410 + (CCA)n Simple_repeat Simple_repeat 3 92 0 8 623 219 177 0 0 chr17 4995268 4995330 -90277321 + (CAG)n Simple_repeat Simple_repeat 1 62 0 8 623 26 64 0 0 chr17 4995561 4995608 -90277043 + GC_rich Low_complexity Low_complexity 1 47 0 8 623 22 0 0 0 chr17 4995650 4995672 -90276979 + GC_rich Low_complexity Low_complexity 1 22 0 8 623 202 71 0 0 chr17 4995837 4995865 -90276786 + (CGG)n Simple_repeat Simple_repeat 1 28 0 8 623 363 98 0 0 chr17 4995865 4995926 -90276725 + (GGA)n Simple_repeat Simple_repeat 1 61 0 8 623 327 211 0 0 chr17 4995906 4996001 -90276650 + (CAG)n Simple_repeat Simple_repeat 2 96 0 8 623 35 71 0 0 chr17 4996089 4996159 -90276492 + GC_rich Low_complexity Low_complexity 1 70 0 8 623 25 65 0 0 chr17 4996320 4996366 -90276285 + GC_rich Low_complexity Low_complexity 1 46 0 8 623 35 24 0 0 chr17 4996584 4996626 -90276025 + GC_rich Low_complexity Low_complexity 1 42 0 8 623 231 61 0 0 chr17 4996880 4996913 -90275738 + (A)n Simple_repeat Simple_repeat 1 33 0 8 623 202 163 23 23 chr17 4998398 4998442 -90274209 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 8 623 29 0 0 0 chr17 4999131 4999160 -90273491 + AT_rich Low_complexity Low_complexity 1 29 0 8 623 646 255 70 16 chr17 5001598 5001785 -90270866 - ID_B1 SINE B4 -8 216 20 1 623 267 267 38 0 chr17 5004012 5004143 -90268508 + (CTAGGG)n Simple_repeat Simple_repeat 1 136 0 2 623 287 205 31 93 chr17 5004629 5004726 -90267925 - B3 SINE B2 -125 91 1 3 623 246 250 63 38 chr17 5005332 5005411 -90267240 + B1F SINE Alu 66 146 -3 4 623 180 0 0 0 chr17 5005583 5005603 -90267048 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 623 234 0 0 0 chr17 5005603 5005628 -90267023 + (GA)n Simple_repeat Simple_repeat 1 26 0 6 623 221 179 12 0 chr17 5005645 5005729 -90266922 + (TGAG)n Simple_repeat Simple_repeat 4 88 0 7 623 1142 52 0 0 chr17 5005888 5006022 -90266629 - B1_Mus2 SINE Alu -13 134 1 8 623 342 260 56 65 chr17 5007855 5007962 -90264689 - PB1D9 SINE Alu -1 119 14 9 623 216 196 0 0 chr17 5008040 5008086 -90264565 + T-rich Low_complexity Low_complexity 5 50 0 1 623 900 311 24 35 chr17 5009652 5009942 -90262709 + B4 SINE B4 6 292 0 1 623 278 198 71 106 chr17 5011228 5011341 -90261310 + MT2B LTR ERVL 148 256 -345 1 623 751 166 44 22 chr17 5011253 5011389 -90261262 + B1_Mur2 SINE Alu 11 149 0 1 623 22 0 0 0 chr17 5012553 5012575 -90260076 + AT_rich Low_complexity Low_complexity 1 22 0 1 623 515 204 35 69 chr17 5013091 5013207 -90259444 + B1_Mur2 SINE Alu 29 140 -9 1 623 369 0 0 0 chr17 5013230 5013271 -90259380 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 623 607 232 49 0 chr17 5013652 5013794 -90258857 - B1F2 SINE Alu 0 149 1 1 623 335 243 65 89 chr17 5013984 5014005 -90258646 - ID_B1 SINE B4 -45 247 160 1 623 673 148 90 38 chr17 5014005 5014138 -90258513 - B1_Mur2 SINE Alu -1 148 9 1 623 335 243 65 89 chr17 5014138 5014155 -90258496 - ID_B1 SINE B4 -45 159 77 1 623 593 254 0 0 chr17 5014190 5014308 -90258343 - B1_Mur2 SINE Alu -30 119 2 2 623 1191 196 0 0 chr17 5015326 5015530 -90257121 - B3 SINE B2 -11 205 2 2 623 879 116 43 14 chr17 5016072 5016212 -90256439 - B1_Mur3 SINE Alu -3 146 3 2 623 25 31 0 0 chr17 5016247 5016279 -90256372 + AT_rich Low_complexity Low_complexity 1 32 0 2 623 514 194 151 16 chr17 5016407 5016533 -90256118 - B1_Mur4 SINE Alu -6 144 2 2 623 223 300 0 0 chr17 5016948 5016998 -90255653 + polypyrimidine Low_complexity Low_complexity 2 51 0 2 623 228 241 295 25 chr17 5018132 5018329 -90254322 - Cheshire DNA MER1_type -2148 272 1 2 623 603 251 0 0 chr17 5019466 5019913 -90252738 + (CA)n Simple_repeat Simple_repeat 1 447 0 2 623 339 285 39 12 chr17 5019938 5020035 -90252616 - B1F1 SINE Alu -20 107 1 2 623 32 26 0 0 chr17 5020460 5020499 -90252152 + AT_rich Low_complexity Low_complexity 1 39 0 2 623 575 255 160 62 chr17 5022294 5022742 -90249909 - MLT1E1 LTR MaLR -68 585 1 3 623 348 219 218 32 chr17 5022778 5022934 -90249717 - MLT1B LTR MaLR 0 390 206 3 623 180 0 0 0 chr17 5023290 5023310 -90249341 + (GA)n Simple_repeat Simple_repeat 2 21 0 3 623 236 228 97 0 chr17 5023816 5023905 -90248746 - PB1D7 SINE Alu -16 104 8 3 623 651 249 44 5 chr17 5024089 5024271 -90248380 - B3 SINE B2 0 198 1 3 623 428 304 254 0 chr17 5024278 5024516 -90248135 + MTE2a LTR MaLR 81 379 0 3 623 1071 173 6 0 chr17 5024669 5024848 -90247803 + URR1A DNA MER1_type 2 181 -45 3 623 417 109 0 0 chr17 5024891 5024955 -90247696 + (TG)n Simple_repeat Simple_repeat 2 65 0 3 623 244 279 61 40 chr17 5025772 5025896 -90246755 - RSINE1 SINE B4 0 165 2 3 623 846 246 70 0 chr17 5026669 5026856 -90245795 + B3 SINE B2 2 201 -15 3 623 195 42 0 0 chr17 5026865 5026889 -90245762 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 4 623 223 255 0 0 chr17 5028070 5028121 -90244530 - MIR SINE MIR -99 163 113 4 623 1387 74 21 16 chr17 5028439 5028632 -90244019 + B2_Mm2 SINE B2 1 194 -1 4 623 536 241 43 8 chr17 5028638 5028755 -90243896 + B1_Mus2 SINE Alu 1 121 -26 4 623 226 296 42 115 chr17 5028842 5029033 -90243618 - L1MC4 LINE L1 -49 7993 7817 4 623 733 211 85 10 chr17 5029197 5029398 -90243253 - B3 SINE B2 0 216 1 4 623 304 214 52 112 chr17 5030671 5030787 -90241864 - L1MCa LINE L1 -4551 1957 1849 4 623 1074 97 158 0 chr17 5031585 5031750 -90240901 + B2_Mm2 SINE B2 2 192 -3 4 623 429 104 0 0 chr17 5032064 5032141 -90240510 + (GGAA)n Simple_repeat Simple_repeat 3 79 0 4 623 273 332 57 57 chr17 5032217 5032428 -90240223 + L3 LINE CR1 3533 3743 -746 4 623 418 189 0 51 chr17 5033032 5033110 -90239541 - B1F1 SINE Alu -8 141 68 5 623 768 111 0 0 chr17 5033111 5033228 -90239423 + (GA)n Simple_repeat Simple_repeat 1 117 0 5 623 6070 87 10 5 chr17 5034497 5035310 -90237341 + L1Md_F2 LINE L1 5766 6582 0 5 623 741 103 48 12 chr17 5035475 5035642 -90237009 + (TCTA)n Simple_repeat Simple_repeat 2 174 0 5 623 445 265 17 100 chr17 5035667 5035847 -90236804 - RSINE1 SINE B4 0 165 1 5 623 197 108 27 0 chr17 5036478 5036515 -90236136 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 623 3314 28 18 0 chr17 5037488 5037876 -90234775 + MTA_Mm LTR MaLR 1 395 -1 5 623 182 244 96 60 chr17 5039699 5039782 -90232869 + L2c LINE L2 3277 3362 -25 5 623 282 143 0 0 chr17 5040954 5041003 -90231648 + (TCCC)n Simple_repeat Simple_repeat 4 52 0 5 623 439 352 12 0 chr17 5042693 5042855 -90229796 - RSINE1 SINE B4 0 165 2 5 623 1244 48 0 0 chr17 5042915 5043062 -90229589 + B1_Mus2 SINE Alu 1 147 0 6 623 232 200 0 39 chr17 5043519 5043571 -90229080 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 623 526 306 0 0 chr17 5043630 5043741 -90228910 - ID_B1 SINE B4 -34 190 80 6 623 330 239 25 58 chr17 5045106 5045226 -90227425 - PB1D10 SINE Alu 0 117 2 6 623 27 29 0 0 chr17 5046857 5046891 -90225760 + AT_rich Low_complexity Low_complexity 1 34 0 6 623 509 241 26 0 chr17 5046971 5047087 -90225564 - B3 SINE B2 -86 130 12 6 623 1292 115 0 10 chr17 5047108 5047301 -90225350 - B2_Mm2 SINE B2 -3 192 2 6 623 323 278 0 30 chr17 5049029 5049087 -90223564 + (CCAA)n Simple_repeat Simple_repeat 2 58 0 6 623 483 18 0 0 chr17 5049087 5049143 -90223508 + (TCCA)n Simple_repeat Simple_repeat 2 57 0 6 623 323 278 0 30 chr17 5049143 5049184 -90223467 + (CCAA)n Simple_repeat Simple_repeat 3 42 0 6 623 617 165 8 0 chr17 5049191 5049312 -90223339 + (CAGC)n Simple_repeat Simple_repeat 2 123 0 7 623 246 245 81 86 chr17 5050457 5050667 -90221984 - RLTR15 LTR ERVK -17 342 134 7 623 396 209 53 23 chr17 5050814 5050946 -90221705 - RLTR15 LTR ERVK -191 168 33 7 623 657 247 5 70 chr17 5051024 5051224 -90221427 - B3A SINE B2 -3 195 9 7 623 435 118 247 0 chr17 5052170 5052263 -90220388 - B1_Mur3 SINE Alu -15 134 19 7 623 205 343 38 9 chr17 5052591 5052745 -90219906 - MIR SINE MIR -81 187 25 7 623 563 259 114 6 chr17 5052902 5053077 -90219574 + B3A SINE B2 1 194 -4 7 623 201 94 0 0 chr17 5053904 5053936 -90218715 + (TCCA)n Simple_repeat Simple_repeat 1 32 0 7 623 594 0 0 0 chr17 5053936 5054002 -90218649 + (TCTA)n Simple_repeat Simple_repeat 2 67 0 7 623 394 287 32 0 chr17 5054004 5054098 -90218553 - RSINE1 SINE B4 -38 127 31 7 623 186 143 0 0 chr17 5054840 5054875 -90217776 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 7 623 405 0 0 0 chr17 5056314 5056359 -90216292 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 623 371 325 153 57 chr17 5056990 5057199 -90215452 - HAL1 LINE L1 -2219 288 60 8 623 189 0 0 0 chr17 5057946 5057967 -90214684 + (T)n Simple_repeat Simple_repeat 1 21 0 8 623 634 305 50 46 chr17 5059649 5059910 -90212741 - B4A SINE B4 0 292 31 8 623 192 77 0 0 chr17 5060603 5060629 -90212022 + (TG)n Simple_repeat Simple_repeat 2 27 0 8 623 873 153 21 0 chr17 5061559 5061703 -90210948 + B1_Mus2 SINE Alu 1 147 0 8 623 270 0 0 0 chr17 5064049 5064079 -90208572 + (TC)n Simple_repeat Simple_repeat 1 30 0 8 623 234 345 88 0 chr17 5065743 5065856 -90206795 - MIR SINE MIR -57 205 83 8 623 201 189 24 24 chr17 5066427 5066489 -90206162 - MIRc SINE MIR -121 147 83 8 623 371 188 0 0 chr17 5066717 5066781 -90205870 - ID_B1 SINE B4 -13 211 148 8 623 1399 60 27 11 chr17 5067816 5068000 -90204651 - B2_Mm2 SINE B2 -8 187 1 9 623 231 125 0 0 chr17 5068918 5068958 -90203693 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 623 276 133 0 0 chr17 5069008 5069068 -90203583 + (TC)n Simple_repeat Simple_repeat 2 61 0 9 623 261 0 0 0 chr17 5069298 5069327 -90203324 + (TCTG)n Simple_repeat Simple_repeat 4 32 0 9 623 332 281 114 0 chr17 5069347 5069461 -90203190 - RSINE1 SINE B4 0 165 39 9 623 508 127 49 7 chr17 5069772 5069915 -90202736 + (TG)n Simple_repeat Simple_repeat 1 149 0 9 623 305 261 32 9 chr17 5069931 5070154 -90202497 + (TG)n Simple_repeat Simple_repeat 1 228 0 9 623 1829 186 54 20 chr17 5070824 5071230 -90201421 + MTC LTR MaLR 2 421 0 9 623 350 301 67 8 chr17 5071782 5071916 -90200735 - HAL1 LINE L1 -801 1706 1565 9 623 238 312 189 13 chr17 5071916 5072075 -90200576 - RLTR21 LTR ERVK -324 1248 1062 9 623 265 268 0 53 chr17 5072043 5072118 -90200533 - B1_Mur1 SINE Alu -6 143 73 9 623 250 208 0 0 chr17 5072112 5072160 -90200491 - B4 SINE B4 -154 138 91 1 623 232 208 75 0 chr17 5072126 5072179 -90200472 - MT2B LTR ERVL -301 300 244 1 623 3466 28 5 0 chr17 5072188 5072580 -90200071 + MTA_Mm LTR MaLR 3 396 0 1 623 365 362 90 42 chr17 5072951 5073225 -90199426 - HAL1 LINE L1 -1323 1184 897 9 623 183 42 0 0 chr17 5073225 5073249 -90199402 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 623 365 362 90 42 chr17 5073249 5073308 -90199343 - HAL1 LINE L1 -1611 896 836 9 623 1296 96 6 0 chr17 5074391 5074568 -90198083 + B2_Mm1a SINE B2 2 179 -14 1 623 240 167 0 0 chr17 5074638 5074686 -90197965 + C-rich Low_complexity Low_complexity 2 49 0 1 623 324 0 0 0 chr17 5074687 5074723 -90197928 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 623 661 189 37 15 chr17 5075729 5075863 -90196788 + B1_Mur2 SINE Alu 1 137 -12 1 623 572 312 26 16 chr17 5080320 5080509 -90192142 - B3A SINE B2 -7 191 1 1 623 332 245 30 54 chr17 5085170 5085295 -90187356 - B1F2 SINE Alu 0 120 1 1 623 217 256 107 24 chr17 5085330 5085414 -90187237 + B4A SINE B4 1 91 -201 1 623 438 276 23 30 chr17 5085514 5085645 -90187006 + ID_B1 SINE B4 63 192 -32 1 623 453 50 0 0 chr17 5085839 5085899 -90186752 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 623 183 100 0 0 chr17 5086303 5086333 -90186318 + (C)n Simple_repeat Simple_repeat 1 30 0 1 623 8061 48 6 2 chr17 5087428 5088410 -90184241 - L1_Mus1 LINE L1 0 6654 5588 1 623 1024 61 0 0 chr17 5089172 5089303 -90183348 + B1_Mus1 SINE Alu 12 142 -6 1 623 286 220 128 64 chr17 5091063 5091204 -90181447 - L1ME2 LINE L1 -5 6159 6010 1 623 247 234 0 94 chr17 5091395 5091480 -90181171 + L1M4 LINE L1 4943 5019 -1127 1 623 1018 184 216 16 chr17 5092224 5092478 -90180173 + MTD LTR MaLR 2 306 -113 1 623 189 0 0 0 chr17 5093974 5093995 -90178656 + (T)n Simple_repeat Simple_repeat 1 21 0 1 623 22 0 0 0 chr17 5096049 5096071 -90176580 + AT_rich Low_complexity Low_complexity 1 22 0 1 623 410 199 11 15 chr17 5097851 5097965 -90174686 - B1_Mus2 SINE Alu -1 149 41 1 623 463 272 101 13 chr17 5098502 5098651 -90174000 + RSINE1 SINE B4 2 163 -2 1 623 261 0 0 0 chr17 5098742 5098771 -90173880 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 623 575 218 132 44 chr17 5099064 5099246 -90173405 - B3A SINE B2 0 198 1 1 623 963 130 7 7 chr17 5099970 5100117 -90172534 - B1_Mus1 SINE Alu -1 147 1 1 623 351 0 0 0 chr17 5100275 5100314 -90172337 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 623 207 0 0 0 chr17 5100895 5100918 -90171733 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 623 432 321 38 13 chr17 5100945 5101103 -90171548 + RSINE1 SINE B4 2 163 -2 1 623 235 276 77 19 chr17 5101227 5101328 -90171323 - MLT2D LTR ERVL -360 196 90 1 623 296 232 171 0 chr17 5101540 5101622 -90171029 - PB1D10 SINE Alu -20 97 2 1 623 186 143 0 0 chr17 5101629 5101664 -90170987 + (T)n Simple_repeat Simple_repeat 1 35 0 1 623 259 209 19 0 chr17 5102248 5102353 -90170298 + (TG)n Simple_repeat Simple_repeat 2 108 0 1 623 426 203 21 0 chr17 5102364 5102507 -90170144 + (TG)n Simple_repeat Simple_repeat 1 146 0 1 623 582 126 0 0 chr17 5102813 5102916 -90169735 + (TG)n Simple_repeat Simple_repeat 1 103 0 1 623 315 0 0 0 chr17 5103209 5103244 -90169407 + (T)n Simple_repeat Simple_repeat 1 35 0 1 623 282 336 0 27 chr17 5103592 5103702 -90168949 + RMER12 LTR ERVK 749 855 -467 1 623 360 333 83 42 chr17 5103722 5103963 -90168688 + RMER12 LTR ERVK 770 1020 -302 1 623 225 295 46 28 chr17 5104839 5104947 -90167704 + MLT1G3 LTR MaLR 419 528 -67 1 623 303 323 0 44 chr17 5105071 5105207 -90167444 - L1MEd LINE L1 -5545 574 445 1 623 288 255 132 38 chr17 5105581 5105687 -90166964 - PB1D10 SINE Alu -1 116 1 1 623 228 316 53 0 chr17 5105604 5105699 -90166952 - MT2B2 LTR ERVL -333 251 152 1 623 244 254 29 29 chr17 5106221 5106290 -90166361 - B4 SINE B4 -216 76 8 1 623 269 263 40 0 chr17 5106318 5106394 -90166257 - B1F SINE Alu -30 119 41 1 623 548 289 108 12 chr17 5107871 5108191 -90164460 - L1MA8 LINE L1 -1 6290 5926 1 623 338 339 63 0 chr17 5108895 5109022 -90163629 + L2a LINE L2 3284 3418 -8 1 623 249 33 0 0 chr17 5109188 5109218 -90163433 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 623 1141 104 16 37 chr17 5109810 5109999 -90162652 - B2_Mm2 SINE B2 -1 194 10 1 623 303 28 0 0 chr17 5110011 5110047 -90162604 + (TTG)n Simple_repeat Simple_repeat 2 37 0 1 623 228 135 0 0 chr17 5110583 5110620 -90162031 + (T)n Simple_repeat Simple_repeat 1 37 0 1 624 705 247 40 7 chr17 5112701 5112852 -90159799 - B3A SINE B2 -42 156 1 1 624 270 179 35 93 chr17 5112778 5112864 -90159787 - B4A SINE B4 -211 81 1 1 624 662 169 32 25 chr17 5112987 5113145 -90159506 - MYSERV16_I-int LTR ERVK -1080 5470 5312 1 624 544 243 79 23 chr17 5113149 5113326 -90159325 - RMER4A LTR ERVK -29 437 251 1 624 797 236 54 10 chr17 5113398 5113641 -90159010 - MYSERV16_I-int LTR ERVK -1518 5032 4838 1 624 1012 257 77 44 chr17 5113689 5114141 -90158510 - MYSERV16_I-int LTR ERVK -1782 544 78 1 624 1620 258 84 22 chr17 5114148 5114694 -90157957 - MYSERV6-int LTR ERVK -4396 4563 3984 1 624 316 278 133 44 chr17 5115393 5115551 -90157100 + B3 SINE B2 45 216 0 1 624 385 289 10 10 chr17 5116290 5116388 -90156263 - MER5A DNA MER1_type -48 141 44 1 624 519 31 0 0 chr17 5116699 5116764 -90155887 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 624 301 222 10 10 chr17 5116919 5117019 -90155632 + CT-rich Low_complexity Low_complexity 1 100 0 1 624 400 244 68 17 chr17 5117019 5117136 -90155515 - B1_Mur3 SINE Alu -22 127 5 1 624 654 289 100 8 chr17 5117444 5117685 -90154966 - B4 SINE B4 -24 268 6 1 624 412 335 100 0 chr17 5118410 5118580 -90154071 + MER2 DNA MER2_type 99 285 -60 1 624 701 147 7 19 chr17 5119024 5119160 -90153491 + B1_Mur4 SINE Alu 21 150 0 1 624 365 243 257 34 chr17 5120005 5120180 -90152471 - B3 SINE B2 0 216 3 1 624 297 327 63 32 chr17 5120384 5120542 -90152109 - RSINE1 SINE B4 0 165 3 1 624 378 0 0 0 chr17 5122276 5122318 -90150333 + (TTTTC)n Simple_repeat Simple_repeat 3 44 0 1 624 992 51 71 14 chr17 5122320 5122460 -90150191 - B1_Mus1 SINE Alu 0 148 1 1 624 426 195 0 117 chr17 5122347 5122475 -90150176 - MT2B LTR ERVL -337 264 152 1 624 225 0 0 0 chr17 5122568 5122593 -90150058 + (TCC)n Simple_repeat Simple_repeat 1 25 0 1 624 250 327 111 41 chr17 5122757 5123028 -90149623 + L1MC LINE L1 5541 5830 -2052 1 624 2823 157 73 59 chr17 5123262 5123403 -90149248 - RMER1A Other Other -2 1028 876 1 624 195 42 0 0 chr17 5123403 5123427 -90149224 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 624 2823 157 73 59 chr17 5123427 5123874 -90148777 - RMER1A Other Other -155 875 432 1 624 265 233 12 88 chr17 5123881 5123961 -90148690 - RMER1A Other Other -788 242 169 1 624 320 143 0 100 chr17 5124562 5124632 -90148019 - PB1D10 SINE Alu -13 104 42 1 624 407 191 35 35 chr17 5124669 5124783 -90147868 - RMER1A Other Other -1 1029 916 1 624 234 0 0 0 chr17 5126198 5126224 -90146427 + (CAGG)n Simple_repeat Simple_repeat 3 28 0 1 624 25 31 0 0 chr17 5126404 5126436 -90146215 + AT_rich Low_complexity Low_complexity 1 32 0 1 624 271 214 18 0 chr17 5126460 5126516 -90146135 + B4A SINE B4 89 145 -147 1 624 474 201 1 0 chr17 5126467 5126555 -90146096 + B1F SINE Alu 12 100 -20 1 624 809 175 14 0 chr17 5131534 5131677 -90140974 - B1_Mur4 SINE Alu -5 145 1 1 624 1114 23 0 57 chr17 5133334 5133475 -90139176 + B1_Mus2 SINE Alu 3 135 -12 1 624 744 86 0 0 chr17 5133475 5133580 -90139071 + (GAAA)n Simple_repeat Simple_repeat 2 106 0 1 624 207 0 0 0 chr17 5134198 5134221 -90138430 + (TTTTTG)n Simple_repeat Simple_repeat 3 25 0 1 624 359 250 35 61 chr17 5134783 5134898 -90137753 - PB1D9 SINE Alu -3 117 6 1 624 244 260 12 99 chr17 5134829 5134910 -90137741 - MT2B LTR ERVL -371 230 157 1 624 207 0 0 0 chr17 5134912 5134935 -90137716 + (T)n Simple_repeat Simple_repeat 1 23 0 1 624 308 337 40 10 chr17 5135363 5135462 -90137189 + PB1 SINE Alu 1 102 -25 1 624 21 0 0 0 chr17 5137194 5137215 -90135436 + AT_rich Low_complexity Low_complexity 1 21 0 1 624 189 0 0 0 chr17 5137993 5138014 -90134637 + (TCTG)n Simple_repeat Simple_repeat 3 23 0 1 624 30 0 0 0 chr17 5138629 5138659 -90133992 + GC_rich Low_complexity Low_complexity 1 30 0 1 624 860 171 14 0 chr17 5139974 5140120 -90132531 - B1_Mus1 SINE Alu 0 148 1 1 624 1131 67 0 36 chr17 5140307 5140556 -90132095 + (TCC)n Simple_repeat Simple_repeat 1 239 0 1 624 232 289 26 26 chr17 5140564 5140642 -90132009 - PB1 SINE Alu -2 125 48 1 624 795 216 360 20 chr17 5141587 5141887 -90130764 - MTD LTR MaLR -2 417 16 1 624 617 281 70 0 chr17 5142611 5142796 -90129855 - MER2 DNA MER2_type -102 243 46 1 624 1195 48 7 0 chr17 5149997 5150144 -90122507 + B1_Mus1 SINE Alu 1 148 0 1 624 720 221 89 53 chr17 5151374 5151574 -90121077 - B3A SINE B2 0 198 1 1 624 598 171 114 0 chr17 5152553 5152676 -90119975 + B1_Mus2 SINE Alu 1 137 -10 1 624 194 62 0 30 chr17 5152676 5152709 -90119942 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1 624 521 299 55 17 chr17 5154061 5154299 -90118352 - ORR1E LTR MaLR -142 242 1 1 624 250 276 66 0 chr17 5155156 5155232 -90117419 - MamRep1161 DNA TcMar -864 93 13 1 624 1465 55 16 0 chr17 5155311 5155494 -90117157 + B2_Mm1t SINE B2 3 188 -5 1 624 1868 162 92 27 chr17 5155914 5156283 -90116368 - ORR1B1 LTR MaLR -1 393 1 2 624 324 278 0 14 chr17 5156600 5156673 -90115978 - ID4 SINE ID -10 73 2 2 624 308 193 0 17 chr17 5156673 5156722 -90115929 - ID4 SINE ID -34 49 2 2 624 536 309 19 56 chr17 5157044 5157257 -90115394 - MLT1E LTR MaLR -348 305 101 2 624 423 272 120 149 chr17 5158417 5158659 -90113992 + MT2A LTR ERVL 69 303 -230 2 624 764 220 102 60 chr17 5159302 5159495 -90113156 + MT2A LTR ERVL 257 467 -66 2 624 403 73 0 29 chr17 5159495 5159565 -90113086 + (TG)n Simple_repeat Simple_repeat 1 68 0 2 624 764 220 102 60 chr17 5159565 5159637 -90113014 + MT2A LTR ERVL 468 533 0 2 624 1313 103 0 35 chr17 5160932 5160960 -90111691 - B2_Mm2 SINE B2 0 195 168 2 624 787 35 267 0 chr17 5160960 5161076 -90111575 + B1_Mus1 SINE Alu 2 148 0 2 624 1313 103 0 35 chr17 5161076 5161093 -90111558 - B2_Mm2 SINE B2 -28 167 155 2 624 198 0 0 0 chr17 5161093 5161115 -90111536 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 2 624 1313 103 0 35 chr17 5161115 5161270 -90111381 - B2_Mm2 SINE B2 -41 154 1 2 624 1333 86 32 16 chr17 5161803 5161992 -90110659 - B2_Mm1t SINE B2 -1 192 1 2 624 262 246 88 0 chr17 5162178 5162292 -90110359 - L1MEc LINE L1 -5519 881 758 2 624 316 335 145 62 chr17 5162549 5162839 -90109812 - HAL1 LINE L1 -560 1947 1634 2 624 250 338 12 12 chr17 5164065 5164146 -90108505 + MIRm SINE MIR 97 177 -99 2 624 766 141 11 22 chr17 5166752 5166934 -90105717 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 624 207 214 0 0 chr17 5166934 5166976 -90105675 + (TATATG)n Simple_repeat Simple_repeat 4 45 0 2 624 325 177 5 6 chr17 5168097 5168182 -90104469 + B1_Mus2 SINE Alu 36 148 -1 2 624 279 344 0 10 chr17 5169328 5169425 -90103226 + RSINE1 SINE B4 4 99 -66 2 624 25 0 0 0 chr17 5169511 5169536 -90103115 + AT_rich Low_complexity Low_complexity 1 25 0 2 624 1204 36 0 0 chr17 5170794 5170931 -90101720 - B1_Mus1 SINE Alu -11 137 1 2 624 297 289 216 37 chr17 5173271 5173433 -90099218 - B4A SINE B4 -17 275 85 2 624 334 173 8 0 chr17 5175242 5175316 -90097335 + B1_Mur4 SINE Alu 43 148 -2 2 624 23 33 0 0 chr17 5177261 5177291 -90095360 + AT_rich Low_complexity Low_complexity 1 30 0 2 624 516 248 31 0 chr17 5180036 5180165 -90092486 - B1F SINE Alu -16 133 1 2 624 524 271 0 41 chr17 5180340 5180463 -90092188 + PB1 SINE Alu 7 124 -3 2 624 304 335 102 32 chr17 5180463 5180492 -90092159 + B4A SINE B4 91 253 -39 2 624 254 294 115 38 chr17 5182786 5182929 -90089722 + MIRc SINE MIR 35 185 -83 2 624 235 262 16 0 chr17 5183135 5183196 -90089455 + Charlie6 DNA MER1_type 1726 1787 -1713 2 624 477 0 0 0 chr17 5185087 5185140 -90087511 + (GA)n Simple_repeat Simple_repeat 1 53 0 2 624 333 0 0 0 chr17 5185140 5185176 -90087475 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 624 1082 43 14 7 chr17 5186179 5186319 -90086332 + B1_Mus1 SINE Alu 8 148 0 2 624 674 299 68 63 chr17 5186381 5186619 -90086032 + MER33 DNA MER1_type 34 247 -77 2 624 350 291 10 0 chr17 5186619 5186722 -90085929 - U6 snRNA snRNA -2 105 2 2 624 674 297 69 58 chr17 5186722 5186797 -90085854 + MER33 DNA MER1_type 248 311 -13 2 624 196 396 11 0 chr17 5188344 5188435 -90084216 - MIR SINE MIR -150 112 21 2 624 601 216 182 28 chr17 5190531 5190712 -90081939 - B3 SINE B2 -7 209 1 2 624 252 0 0 0 chr17 5191496 5191524 -90081127 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 624 24 0 0 0 chr17 5191656 5191680 -90080971 + GC_rich Low_complexity Low_complexity 1 24 0 2 624 1052 104 0 15 chr17 5193157 5193422 -90079229 + (TG)n Simple_repeat Simple_repeat 1 260 0 2 624 240 310 0 0 chr17 5193505 5193563 -90079088 + ID4_ SINE ID 26 83 0 2 624 354 121 0 0 chr17 5193580 5193646 -90079005 + (TG)n Simple_repeat Simple_repeat 2 67 0 2 624 459 252 37 0 chr17 5193801 5193936 -90078715 - B1F1 SINE Alu 0 149 10 2 624 403 299 91 51 chr17 5194156 5194477 -90078174 - L1ME1 LINE L1 -147 6032 5694 2 624 686 250 73 44 chr17 5194758 5194963 -90077688 - Tigger7 DNA MER2_type -2226 265 55 2 624 21 0 0 0 chr17 5196963 5196984 -90075667 + AT_rich Low_complexity Low_complexity 1 21 0 2 624 21 36 0 0 chr17 5200454 5200482 -90072169 + AT_rich Low_complexity Low_complexity 1 28 0 2 624 615 272 68 6 chr17 5200975 5201138 -90071513 - B3 SINE B2 -14 202 30 2 624 1203 35 7 0 chr17 5201308 5201452 -90071199 - B1_Mm SINE Alu -1 146 2 2 624 210 71 0 0 chr17 5203091 5203119 -90069532 + (GGGTG)n Simple_repeat Simple_repeat 2 29 0 2 624 229 220 0 0 chr17 5205642 5205692 -90066959 + T-rich Low_complexity Low_complexity 1 50 0 2 624 227 267 168 0 chr17 5207807 5207908 -90064743 - Charlie5 DNA MER1_type -2506 118 1 2 624 182 305 139 21 chr17 5208476 5208620 -90064031 - L3 LINE CR1 -189 4300 4140 2 624 1270 114 5 5 chr17 5208939 5209124 -90063527 + B2_Mm1a SINE B2 2 186 -7 2 624 524 169 7 145 chr17 5209164 5209302 -90063349 - B1F2 SINE Alu -7 142 24 2 624 607 118 0 35 chr17 5213687 5213801 -90058850 + CT-rich Low_complexity Low_complexity 4 113 0 2 624 207 0 0 0 chr17 5214317 5214340 -90058311 + (A)n Simple_repeat Simple_repeat 1 23 0 2 624 315 0 0 0 chr17 5214384 5214419 -90058232 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 2 624 1106 73 0 0 chr17 5214419 5214556 -90058095 - B1_Mus1 SINE Alu -8 140 4 2 624 468 300 193 16 chr17 5215143 5215454 -90057197 - MLT1E1A LTR MaLR -101 552 165 2 624 948 119 282 6 chr17 5215616 5215793 -90056858 + URR1A DNA MER1_type 1 226 0 2 624 1463 45 17 0 chr17 5215823 5216000 -90056651 - B2_Mm2 SINE B2 -14 181 2 2 624 303 150 0 0 chr17 5216026 5216086 -90056565 + (TC)n Simple_repeat Simple_repeat 1 60 0 2 624 342 0 0 0 chr17 5216240 5216278 -90056373 + (TA)n Simple_repeat Simple_repeat 1 38 0 2 624 1180 68 0 0 chr17 5216596 5216743 -90055908 + B1_Mus2 SINE Alu 1 147 0 2 624 240 137 0 0 chr17 5216743 5216794 -90055857 + (A)n Simple_repeat Simple_repeat 1 51 0 2 624 324 0 0 0 chr17 5218596 5218632 -90054019 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 624 681 228 112 12 chr17 5218871 5219040 -90053611 + B3 SINE B2 1 186 -30 2 624 572 235 21 57 chr17 5219051 5219191 -90053460 - B1_Mus1 SINE Alu -9 139 5 2 624 234 268 61 164 chr17 5219191 5219216 -90053435 - B4 SINE B4 -75 217 70 2 624 261 292 67 0 chr17 5220103 5220192 -90052459 + MER53 DNA hAT 46 140 -53 2 624 529 296 37 83 chr17 5220194 5220411 -90052240 + B3 SINE B2 3 209 -7 2 624 621 273 56 35 chr17 5221264 5221486 -90051165 - B4A SINE B4 0 292 58 2 624 232 287 102 11 chr17 5221692 5221780 -90050871 - MamRep605 Unknown Unknown -92 784 689 2 624 987 170 45 68 chr17 5222246 5222467 -90050184 - B3 SINE B2 0 216 1 2 624 204 40 0 0 chr17 5223709 5223734 -90048917 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 2 624 705 144 142 14 chr17 5223735 5223876 -90048775 - B2_Mm2 SINE B2 -35 160 2 2 624 192 40 0 0 chr17 5224506 5224531 -90048120 + (TTTTTG)n Simple_repeat Simple_repeat 4 28 0 2 624 223 314 25 0 chr17 5224813 5224972 -90047679 + (TATATG)n Simple_repeat Simple_repeat 6 168 0 2 624 207 156 0 0 chr17 5225144 5225176 -90047475 + G-rich Low_complexity Low_complexity 5 36 0 2 624 635 244 22 0 chr17 5226509 5226644 -90046007 - B1F SINE Alu -4 145 8 2 624 423 303 7 72 chr17 5226510 5226663 -90045988 - ID_B1 SINE B4 -5 219 77 2 624 270 0 0 0 chr17 5227866 5227896 -90044755 + (T)n Simple_repeat Simple_repeat 1 30 0 2 624 200 250 186 10 chr17 5229643 5229740 -90042911 - MIRb SINE MIR -147 121 8 2 624 190 299 196 7 chr17 5229996 5230144 -90042507 - MIRc SINE MIR -23 245 67 2 624 285 51 0 0 chr17 5230439 5230478 -90042173 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 624 299 194 53 21 chr17 5231359 5231454 -90041197 + Lx9 LINE L1 7532 7629 -15 2 624 566 254 262 21 chr17 5232194 5232427 -90040224 + B4A SINE B4 2 290 -2 2 624 269 325 24 0 chr17 5232668 5232791 -90039860 + L1MD3 LINE L1 7515 7640 -355 2 624 885 104 83 7 chr17 5234119 5234264 -90038387 + B2_Mm2 SINE B2 17 172 -23 2 624 203 284 24 12 chr17 5234644 5234726 -90037925 + (CACCC)n Simple_repeat Simple_repeat 2 84 0 2 624 198 0 0 0 chr17 5235505 5235527 -90037124 + (CA)n Simple_repeat Simple_repeat 1 22 0 2 624 706 240 135 96 chr17 5235638 5235919 -90036732 + B4A SINE B4 1 292 0 2 624 408 143 0 0 chr17 5235953 5236023 -90036628 + (CA)n Simple_repeat Simple_repeat 1 70 0 2 624 404 221 26 4 chr17 5237219 5237456 -90035195 + (TG)n Simple_repeat Simple_repeat 1 242 0 2 625 479 153 10 0 chr17 5243652 5243750 -90028901 + (TG)n Simple_repeat Simple_repeat 2 100 0 2 625 21 57 0 0 chr17 5244259 5244294 -90028357 + AT_rich Low_complexity Low_complexity 1 35 0 2 625 392 289 26 0 chr17 5244968 5245082 -90027569 - PB1D7 SINE Alu -3 117 1 2 625 469 288 104 7 chr17 5245188 5245342 -90027309 - MTD LTR MaLR -249 170 2 2 625 191 36 36 0 chr17 5245437 5245465 -90027186 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2 625 231 250 180 31 chr17 5245491 5245619 -90027032 - Lx5 LINE L1 0 7050 6904 2 625 311 246 0 0 chr17 5246181 5246246 -90026405 - ID4_ SINE ID -16 67 3 2 625 321 296 81 10 chr17 5246476 5246575 -90026076 + PB1D10 SINE Alu 9 114 -3 2 625 423 0 0 0 chr17 5248631 5248678 -90023973 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 625 233 244 58 47 chr17 5251007 5251093 -90021558 - RLTR23 LTR ERV1 -98 332 246 3 625 441 229 123 14 chr17 5251463 5251609 -90021042 + MER44B DNA MER2_type 340 501 -49 3 625 432 0 0 0 chr17 5252271 5252319 -90020332 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 625 232 226 15 46 chr17 5252683 5252748 -90019903 + A-rich Low_complexity Low_complexity 3 65 0 3 625 825 20 0 0 chr17 5253307 5253406 -90019245 + (CA)n Simple_repeat Simple_repeat 1 99 0 3 625 428 258 231 0 chr17 5253696 5253878 -90018773 + ID_B1 SINE B4 1 224 0 3 625 681 260 72 18 chr17 5253912 5254135 -90018516 + B4A SINE B4 58 292 0 3 625 215 319 28 42 chr17 5254359 5254431 -90018220 - RSINE1 SINE B4 -2 163 93 3 625 358 285 7 91 chr17 5256396 5256539 -90016112 + RSINE1 SINE B4 4 134 -31 3 625 861 68 0 0 chr17 5256548 5256665 -90015986 + (GGGA)n Simple_repeat Simple_repeat 2 118 0 3 625 452 292 36 83 chr17 5257183 5257351 -90015300 + RSINE1 SINE B4 3 162 -3 3 625 306 272 0 0 chr17 5257354 5257516 -90015135 + (CA)n Simple_repeat Simple_repeat 1 162 0 3 625 227 368 47 23 chr17 5258006 5258134 -90014517 - RMER15 LTR ERVL -156 419 289 3 625 279 54 0 0 chr17 5258134 5258171 -90014480 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 625 467 247 107 27 chr17 5258431 5258581 -90014070 + MER58B DNA MER1_type 164 325 -16 3 625 582 234 220 0 chr17 5258992 5259219 -90013432 - MTE2b LTR MaLR 0 379 103 3 625 22 0 0 0 chr17 5259631 5259653 -90012998 + AT_rich Low_complexity Low_complexity 1 22 0 3 625 513 331 151 4 chr17 5259656 5260095 -90012556 + L1MD3 LINE L1 6457 6951 -1044 3 625 510 315 130 31 chr17 5260158 5260381 -90012270 - MLT1E1 LTR MaLR -6 648 404 3 625 319 252 134 5 chr17 5260541 5260667 -90011984 + B4A SINE B4 126 281 -11 3 625 326 323 23 8 chr17 5260978 5261106 -90011545 + L1MD3 LINE L1 7131 7260 -622 3 625 423 265 29 14 chr17 5261276 5261414 -90011237 + L1MD3 LINE L1 7499 7638 -244 3 625 749 191 125 0 chr17 5266575 5266727 -90005924 + URR1A DNA MER1_type 20 190 -36 3 625 362 200 13 0 chr17 5266764 5266839 -90005812 + URR1A DNA MER1_type 150 225 -1 3 625 211 324 69 9 chr17 5269080 5269192 -90003459 + MIR SINE MIR 32 160 -108 3 625 201 74 0 0 chr17 5270365 5270392 -90002259 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 625 220 308 72 62 chr17 5272481 5272675 -89999976 + L2c LINE L2 3186 3381 -6 3 625 568 246 109 31 chr17 5272785 5273041 -89999610 + B4A SINE B4 1 276 -16 3 625 26 30 0 0 chr17 5274044 5274077 -89998574 + AT_rich Low_complexity Low_complexity 1 33 0 3 625 1089 73 0 0 chr17 5274252 5274389 -89998262 + B1_Mus1 SINE Alu 1 137 -11 3 625 260 268 0 0 chr17 5274636 5274692 -89997959 - MIRb SINE MIR -83 185 130 3 625 1070 30 98 0 chr17 5274842 5274974 -89997677 + B1_Mm SINE Alu 3 147 0 3 625 279 266 37 25 chr17 5274978 5275059 -89997592 + ID4_ SINE ID 1 82 -1 3 625 378 0 0 0 chr17 5275441 5275483 -89997168 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 625 1025 48 0 0 chr17 5276325 5276450 -89996201 - B1_Mm SINE Alu 0 147 23 3 625 430 216 102 88 chr17 5276328 5276465 -89996186 - B4 SINE B4 -69 223 85 3 625 1726 21 0 0 chr17 5276473 5276666 -89995985 - B2_Mm1a SINE B2 0 193 1 3 625 25 0 0 0 chr17 5276885 5276910 -89995741 + GC_rich Low_complexity Low_complexity 1 25 0 3 625 21 0 0 0 chr17 5277460 5277481 -89995170 + AT_rich Low_complexity Low_complexity 1 21 0 3 625 297 375 58 19 chr17 5277857 5278012 -89994639 + B4A SINE B4 128 288 -4 3 625 358 20 39 0 chr17 5279689 5279740 -89992911 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 625 581 198 8 41 chr17 5281898 5282019 -89990632 + PB1D9 SINE Alu 3 119 -1 3 625 474 263 35 9 chr17 5282434 5282549 -89990102 + PB1D7 SINE Alu 2 119 -1 3 625 378 284 67 34 chr17 5282659 5282867 -89989784 - MamRep434 DNA TcMar -3 423 209 3 625 875 168 7 0 chr17 5282992 5283135 -89989516 - B1_Mur4 SINE Alu -6 144 1 3 625 269 298 2 1 chr17 5284950 5285041 -89987610 + L2a LINE L2 3281 3423 -3 3 625 187 0 57 57 chr17 5285239 5285274 -89987377 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 3 625 218 125 21 0 chr17 5285575 5285623 -89987028 + (TTTTTG)n Simple_repeat Simple_repeat 5 53 0 3 625 282 268 35 11 chr17 5286258 5286345 -89986306 - B3A SINE B2 -108 90 2 3 625 200 35 35 0 chr17 5287936 5287965 -89984686 + (GGGGA)n Simple_repeat Simple_repeat 5 34 0 3 625 187 188 185 15 chr17 5288046 5288111 -89984540 - L3 LINE CR1 -4309 180 105 3 625 204 97 0 0 chr17 5289528 5289559 -89983092 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 625 1304 98 54 5 chr17 5289701 5289886 -89982765 + B2_Mm2 SINE B2 1 194 -1 3 625 397 262 47 54 chr17 5290583 5290732 -89981919 - B1F SINE Alu -1 148 1 3 625 366 291 51 68 chr17 5290732 5290760 -89981891 - ID_B1 SINE B4 -1 223 50 3 625 200 309 12 0 chr17 5291544 5291628 -89981023 + (CA)n Simple_repeat Simple_repeat 2 86 0 3 625 400 322 12 69 chr17 5291640 5291672 -89980979 + ID_B1 SINE B4 63 213 -11 3 625 572 258 16 0 chr17 5291672 5291800 -89980851 + B1_Mur1 SINE Alu 9 138 -11 3 625 5295 49 6 0 chr17 5292032 5292670 -89979981 - L1_Mus1 LINE L1 -1 6566 5925 3 625 392 354 0 0 chr17 5293031 5293596 -89979055 + (TG)n Simple_repeat Simple_repeat 1 565 0 3 625 184 204 77 58 chr17 5295495 5295547 -89977104 - L2c LINE L2 -72 3315 3263 3 625 482 222 182 0 chr17 5299864 5299990 -89972661 + B1F SINE Alu 1 149 0 3 625 1167 196 30 15 chr17 5300553 5300822 -89971829 - RLTR15 LTR ERVK -86 273 1 3 625 32 0 0 0 chr17 5301839 5301871 -89970780 + AT_rich Low_complexity Low_complexity 1 32 0 3 625 537 16 0 0 chr17 5302082 5302144 -89970507 + (TG)n Simple_repeat Simple_repeat 2 63 0 3 625 679 185 208 27 chr17 5302598 5302781 -89969870 + B3 SINE B2 1 216 0 3 625 312 222 36 24 chr17 5303454 5303537 -89969114 + MIRc SINE MIR 71 154 -114 3 625 213 132 0 0 chr17 5303805 5303843 -89968808 + (T)n Simple_repeat Simple_repeat 1 38 0 3 625 557 224 119 40 chr17 5305113 5305256 -89967395 + B3A SINE B2 2 159 -39 3 625 654 13 0 0 chr17 5305256 5305331 -89967320 + (TC)n Simple_repeat Simple_repeat 2 76 0 3 625 557 224 119 40 chr17 5305331 5305364 -89967287 + B3A SINE B2 160 192 -6 3 625 540 0 0 0 chr17 5307902 5307962 -89964689 + (TG)n Simple_repeat Simple_repeat 2 61 0 3 625 432 245 10 20 chr17 5308959 5309059 -89963592 + B1F SINE Alu 45 143 -6 3 625 549 0 0 0 chr17 5311643 5311704 -89960947 + (GCTG)n Simple_repeat Simple_repeat 4 64 0 3 625 207 0 0 0 chr17 5313369 5313392 -89959259 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 625 212 323 38 12 chr17 5313537 5313697 -89958954 + (CATATA)n Simple_repeat Simple_repeat 2 165 0 3 625 220 225 0 0 chr17 5315214 5315254 -89957397 + polypyrimidine Low_complexity Low_complexity 4 43 0 3 625 298 237 134 0 chr17 5315517 5315614 -89957037 + PB1D10 SINE Alu 1 110 -7 3 625 807 224 25 12 chr17 5316467 5316630 -89956021 + B3 SINE B2 1 165 -51 3 625 592 205 101 75 chr17 5317338 5317527 -89955124 + B3A SINE B2 1 184 -11 3 625 426 245 104 0 chr17 5317701 5317807 -89954844 - PB1 SINE Alu -8 119 3 3 625 325 324 37 0 chr17 5319183 5319291 -89953360 + PB1D10 SINE Alu 1 112 -5 3 625 441 0 0 0 chr17 5320894 5320943 -89951708 + (GA)n Simple_repeat Simple_repeat 1 49 0 3 625 360 0 0 0 chr17 5320943 5320982 -89951669 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 625 532 233 39 69 chr17 5322347 5322550 -89950101 - ETnERV-int LTR ERVK -3115 199 3 3 625 2454 128 15 33 chr17 5322559 5322955 -89949696 - RLTR9D LTR ERVK -14 389 1 3 625 207 0 0 0 chr17 5324692 5324715 -89947936 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 625 195 42 0 0 chr17 5324939 5324963 -89947688 + (T)n Simple_repeat Simple_repeat 1 24 0 3 625 243 0 0 0 chr17 5325002 5325029 -89947622 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 3 625 240 331 122 72 chr17 5325564 5325909 -89946742 + RMER10A LTR ERVL 19 380 -62 3 625 645 14 0 0 chr17 5326064 5326138 -89946513 + (GA)n Simple_repeat Simple_repeat 2 75 0 3 625 241 262 0 16 chr17 5326838 5326900 -89945751 - L1MD LINE L1 -697 5662 5602 3 625 712 142 86 8 chr17 5328660 5328788 -89943863 - B1_Mur1 SINE Alu -6 143 6 3 625 445 211 62 76 chr17 5328788 5328804 -89943847 - ID_B1 SINE B4 -6 218 77 3 625 1946 150 111 9 chr17 5329111 5329454 -89943197 - ORR1B1 LTR MaLR 0 394 17 3 625 576 300 130 17 chr17 5329638 5329869 -89942782 + B4A SINE B4 32 288 -4 3 625 346 301 70 13 chr17 5330694 5330852 -89941799 - MLT1H2 LTR MaLR -301 188 22 3 625 254 296 48 67 chr17 5331139 5331244 -89941407 + MIR SINE MIR 86 188 -74 3 625 508 258 178 0 chr17 5331523 5331686 -89940965 - B3A SINE B2 -1 197 6 3 625 235 240 189 36 chr17 5331906 5332047 -89940604 - MLT1E LTR MaLR -112 512 348 3 625 238 347 126 7 chr17 5332191 5332342 -89940309 - MLT1E LTR MaLR -476 177 9 3 625 26 0 0 0 chr17 5334351 5334377 -89938274 + AT_rich Low_complexity Low_complexity 1 26 0 3 625 718 137 111 0 chr17 5334392 5334509 -89938142 - B3 SINE B2 -86 130 1 3 625 227 376 50 25 chr17 5335464 5335584 -89937067 + MER2 DNA MER2_type 223 345 0 3 625 937 195 68 0 chr17 5338260 5338450 -89934201 - B3 SINE B2 -11 205 3 3 625 390 42 0 0 chr17 5339530 5339578 -89933073 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 625 261 83 0 0 chr17 5341553 5341589 -89931062 + (GGA)n Simple_repeat Simple_repeat 1 36 0 4 625 243 0 0 0 chr17 5343361 5343388 -89929263 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 625 22 0 0 0 chr17 5343848 5343870 -89928781 + AT_rich Low_complexity Low_complexity 1 22 0 4 625 351 113 0 0 chr17 5343921 5343974 -89928677 + (T)n Simple_repeat Simple_repeat 1 53 0 4 625 38 0 0 0 chr17 5344029 5344067 -89928584 + AT_rich Low_complexity Low_complexity 1 38 0 4 625 204 170 0 0 chr17 5344085 5344138 -89928513 + A-rich Low_complexity Low_complexity 1 53 0 4 625 224 59 29 0 chr17 5344377 5344411 -89928240 + (GAAAA)n Simple_repeat Simple_repeat 4 38 0 4 625 213 240 0 20 chr17 5348271 5348322 -89924329 - ID2 SINE ID 0 83 34 4 625 609 76 0 0 chr17 5348397 5348489 -89924162 + (TC)n Simple_repeat Simple_repeat 1 92 0 4 625 459 305 88 68 chr17 5353411 5353706 -89918945 - ORR1E LTR MaLR 0 359 59 4 625 795 224 193 11 chr17 5354005 5354186 -89918465 - B3 SINE B2 0 216 3 4 625 318 326 27 21 chr17 5354693 5354881 -89917770 - L1M5 LINE L1 -359 5765 5577 4 625 225 0 0 0 chr17 5354990 5355015 -89917636 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 625 369 0 0 0 chr17 5355015 5355055 -89917596 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 625 218 204 19 0 chr17 5355179 5355233 -89917418 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 625 666 101 40 20 chr17 5355248 5355400 -89917251 + (CA)n Simple_repeat Simple_repeat 1 155 0 4 625 269 271 70 12 chr17 5355918 5356004 -89916647 - B4A SINE B4 -178 114 24 4 625 185 282 40 16 chr17 5356911 5356995 -89915656 + MIRc SINE MIR 67 153 -123 4 625 696 281 409 4 chr17 5357546 5357788 -89914863 - MTE2b LTR MaLR -33 346 7 4 625 278 252 78 144 chr17 5357938 5358105 -89914546 + B4A SINE B4 17 172 -120 4 625 340 257 0 28 chr17 5358145 5358217 -89914434 + B1_Mur4 SINE Alu 6 75 -75 4 625 266 288 0 0 chr17 5358196 5358269 -89914382 + MTE2b LTR MaLR 274 346 -33 4 625 372 247 124 60 chr17 5358264 5358315 -89914336 + ID_B1 SINE B4 40 216 -6 4 625 680 145 103 0 chr17 5358315 5358432 -89914219 + B1_Mus2 SINE Alu 13 141 -6 4 625 261 83 0 0 chr17 5358434 5358470 -89914181 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 4 625 250 299 48 107 chr17 5358470 5358542 -89914109 + B4 SINE B4 202 276 -16 4 625 288 0 0 0 chr17 5358562 5358594 -89914057 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 625 2296 98 3 0 chr17 5359738 5360056 -89912595 - ORR1A2 LTR MaLR -8 319 1 4 625 489 110 0 0 chr17 5360487 5360560 -89912091 + (TTCC)n Simple_repeat Simple_repeat 3 75 0 4 625 236 272 200 29 chr17 5362030 5362083 -89910568 - Tigger7 DNA MER2_type -25 2466 2397 4 625 384 22 0 0 chr17 5362083 5362128 -89910523 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 625 236 272 200 29 chr17 5362128 5362214 -89910437 - Tigger7 DNA MER2_type -95 2396 2304 4 625 246 282 40 53 chr17 5362255 5362330 -89910321 - Tigger7 DNA MER2_type -2413 78 5 4 625 324 325 58 50 chr17 5363691 5364013 -89908638 - HAL1-2a_MD LINE L1 -495 2529 2275 4 625 234 281 0 0 chr17 5366388 5366445 -89906206 + G-rich Low_complexity Low_complexity 1 57 0 4 625 421 297 112 17 chr17 5366630 5366808 -89905843 + MLT1D LTR MaLR 3 197 -308 4 625 210 277 161 51 chr17 5366802 5366898 -89905753 + RSINE1 SINE B4 12 122 -43 4 625 441 0 0 0 chr17 5366898 5366947 -89905704 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 625 210 277 161 51 chr17 5366947 5366987 -89905664 + RSINE1 SINE B4 123 162 -3 4 625 242 101 27 80 chr17 5366987 5367011 -89905640 + polypurine Low_complexity Low_complexity 1 25 0 4 625 252 100 0 0 chr17 5367011 5367051 -89905600 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 625 242 101 27 80 chr17 5367051 5367078 -89905573 + polypurine Low_complexity Low_complexity 26 51 0 4 625 216 111 0 0 chr17 5367078 5367114 -89905537 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 625 242 101 27 80 chr17 5367114 5367136 -89905515 + polypurine Low_complexity Low_complexity 52 71 0 4 625 353 192 0 8 chr17 5367141 5367267 -89905384 + (CA)n Simple_repeat Simple_repeat 2 126 0 4 625 489 230 0 0 chr17 5367284 5367462 -89905189 + (CA)n Simple_repeat Simple_repeat 2 179 0 4 625 225 318 0 0 chr17 5368015 5368078 -89904573 + MADE2 DNA Mariner 14 76 -4 4 625 1236 260 132 21 chr17 5368224 5368649 -89904002 + MER90 LTR ERV1 1 472 -103 4 625 574 254 43 198 chr17 5368650 5368837 -89903814 + MTD LTR MaLR 5 171 -248 4 625 2140 189 22 0 chr17 5368837 5369196 -89903455 + ORR1B2 LTR MaLR 1 367 0 4 625 1197 139 0 4 chr17 5369218 5369492 -89903159 + (CAGG)n Simple_repeat Simple_repeat 1 273 0 4 625 478 289 28 53 chr17 5369493 5369709 -89902942 + MTD LTR MaLR 194 393 -26 4 625 239 318 71 0 chr17 5370145 5370230 -89902421 + ORR1E LTR MaLR 269 359 0 4 625 425 194 122 0 chr17 5370311 5370409 -89902242 - MTEa LTR MaLR -5 374 265 4 625 255 315 27 0 chr17 5370417 5370490 -89902161 - MTEa LTR MaLR -303 76 2 4 625 414 275 213 28 chr17 5370495 5370724 -89901927 + MLT1B LTR MaLR 93 365 0 4 625 651 286 50 58 chr17 5370812 5371090 -89901561 - B4A SINE B4 -16 276 1 4 625 588 213 23 12 chr17 5372313 5372484 -89900167 + (CATA)n Simple_repeat Simple_repeat 3 175 0 4 625 712 275 43 10 chr17 5373421 5373630 -89899021 + B3 SINE B2 1 216 0 4 625 275 130 0 18 chr17 5373725 5373780 -89898871 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 625 204 40 0 0 chr17 5373780 5373805 -89898846 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 78 463 244 48 24 chr17 5373867 5373993 -89898658 + MIRb SINE MIR 20 148 -120 4 626 350 338 7 116 chr17 5374303 5374450 -89898201 - RSINE1 SINE B4 -33 132 2 4 626 327 258 0 0 chr17 5374633 5374699 -89897952 - RSINE1 SINE B4 -97 68 3 4 626 571 331 9 49 chr17 5374714 5375041 -89897610 - L1M4 LINE L1 -989 5157 4844 4 626 3588 10 8 0 chr17 5376204 5376597 -89896054 + MTA_Mm LTR MaLR 1 396 0 4 626 506 217 90 30 chr17 5378317 5378450 -89894201 + B1F SINE Alu 3 143 -6 4 626 489 271 103 26 chr17 5378541 5378696 -89893955 + MLT1L LTR MaLR 125 291 -319 4 626 401 292 91 20 chr17 5379272 5379471 -89893180 - L1MB8 LINE L1 -79 6099 5887 4 626 216 97 0 0 chr17 5379490 5379521 -89893130 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 626 204 163 23 0 chr17 5379521 5379564 -89893087 + (TCTA)n Simple_repeat Simple_repeat 3 46 0 4 626 3045 38 0 0 chr17 5379903 5380249 -89892402 - ORR1A1 LTR MaLR 0 346 1 4 626 14129 52 14 1 chr17 5380249 5382018 -89890633 - ORR1A1-int LTR MaLR 0 1792 1 4 626 2623 56 62 3 chr17 5382018 5382341 -89890310 - ORR1A1 LTR MaLR -2 344 1 4 626 596 77 11 0 chr17 5383738 5383829 -89888822 + (GA)n Simple_repeat Simple_repeat 2 93 0 4 626 368 257 19 19 chr17 5383869 5383976 -89888675 - PB1D7 SINE Alu -12 108 2 4 626 180 152 0 0 chr17 5384772 5384805 -89887846 + (CACCAT)n Simple_repeat Simple_repeat 4 36 0 4 626 535 296 0 30 chr17 5384850 5385017 -89887634 + HAL1-2a_MD LINE L1 2345 2506 -518 4 626 809 224 120 0 chr17 5385094 5385286 -89887365 - ID_B1 SINE B4 -9 215 1 4 626 252 268 59 51 chr17 5385704 5385822 -89886829 - MLT1L LTR MaLR -318 292 174 4 626 943 258 91 13 chr17 5386103 5386421 -89886230 + Lx8 LINE L1 7130 7472 -1 4 626 405 0 0 0 chr17 5386662 5386707 -89885944 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 626 910 203 142 13 chr17 5386709 5386948 -89885703 - B4A SINE B4 -18 274 5 4 626 360 0 0 0 chr17 5388266 5388306 -89884345 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 4 626 591 205 91 38 chr17 5388526 5388658 -89883993 + B1_Mur2 SINE Alu 2 140 -9 4 626 265 198 18 28 chr17 5388659 5388768 -89883883 + GA-rich Low_complexity Low_complexity 1 108 0 4 626 290 237 21 64 chr17 5388824 5388964 -89883687 + Lx8 LINE L1 7335 7468 -5 4 626 247 300 135 18 chr17 5389719 5389882 -89882769 - MIRb SINE MIR 0 268 87 4 626 234 0 0 0 chr17 5390379 5390405 -89882246 + (CTG)n Simple_repeat Simple_repeat 1 26 0 4 626 355 308 46 64 chr17 5391396 5391659 -89880992 + HAL1-2a_MD LINE L1 2342 2527 -497 4 626 301 299 144 64 chr17 5391684 5391920 -89880731 - ORR1E LTR MaLR -2 357 103 4 626 231 200 13 79 chr17 5391905 5391981 -89880670 - RLTR22_Mus LTR ERVK -474 1334 1264 4 626 186 222 0 0 chr17 5391986 5392040 -89880611 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 626 741 199 0 0 chr17 5392054 5392225 -89880426 + (CA)n Simple_repeat Simple_repeat 1 171 0 4 626 242 310 133 0 chr17 5392375 5392488 -89880163 - MER5A DNA MER1_type -1 188 61 4 626 903 234 130 51 chr17 5392733 5393026 -89879625 + ORR1D2 LTR MaLR 54 369 -1 4 626 4290 249 76 75 chr17 5393033 5393279 -89879372 + ORR1D2-int LTR MaLR 30 265 -1105 4 626 435 38 0 0 chr17 5393279 5393332 -89879319 + (CCA)n Simple_repeat Simple_repeat 1 53 0 4 626 4290 249 76 75 chr17 5393332 5393721 -89878930 + ORR1D2-int LTR MaLR 266 656 -714 4 626 1023 9 0 0 chr17 5393721 5393837 -89878814 + (GGGAA)n Simple_repeat Simple_repeat 4 119 0 4 626 729 63 0 0 chr17 5393844 5393939 -89878712 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 4 626 4290 249 76 75 chr17 5393939 5394634 -89878017 + ORR1D2-int LTR MaLR 662 1369 -1 4 626 1131 282 38 49 chr17 5394634 5394999 -89877652 + ORR1D2 LTR MaLR 1 361 -9 4 626 211 200 0 0 chr17 5395080 5395120 -89877531 + C-rich Low_complexity Low_complexity 1 40 0 4 626 238 319 10 71 chr17 5395127 5395225 -89877426 - B1F2 SINE Alu -57 92 1 4 626 428 299 43 43 chr17 5395225 5395303 -89877348 - ID SINE ID -145 79 2 4 626 209 283 38 0 chr17 5395706 5395759 -89876892 - MIRc SINE MIR -93 175 121 4 626 333 255 71 41 chr17 5396298 5396396 -89876255 - MER20 DNA MER1_type -103 116 16 4 626 305 308 140 0 chr17 5396737 5396880 -89875771 - RSINE1 SINE B4 0 165 3 4 626 283 355 77 87 chr17 5397926 5398213 -89874438 - MLT1B LTR MaLR -29 361 78 4 626 564 282 96 23 chr17 5398531 5398749 -89873902 - MTE2a LTR MaLR -2 377 144 4 626 297 308 32 32 chr17 5398970 5399064 -89873587 - MTE2a LTR MaLR -234 185 92 4 626 2369 98 6 18 chr17 5399335 5399668 -89872983 - ORR1A4 LTR MaLR 0 329 1 4 626 254 301 178 63 chr17 5399815 5399989 -89872662 + B3A SINE B2 1 194 -4 4 626 260 298 223 39 chr17 5400584 5400790 -89871861 - L4 LINE RTE 0 2029 1786 4 626 385 293 48 48 chr17 5401169 5401316 -89871335 - RSINE1 SINE B4 -17 148 2 5 626 249 196 0 0 chr17 5401721 5401777 -89870874 + (ATG)n Simple_repeat Simple_repeat 3 58 0 5 626 513 0 0 0 chr17 5402421 5402478 -89870173 + (GGAA)n Simple_repeat Simple_repeat 4 60 0 5 626 360 0 0 0 chr17 5403601 5403641 -89869010 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 626 401 0 20 0 chr17 5403641 5403689 -89868962 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 626 496 231 99 94 chr17 5403895 5404096 -89868555 + MTE2a LTR MaLR 14 215 -164 5 626 1064 283 152 8 chr17 5403964 5404345 -89868306 + MT2A LTR ERVL 71 506 -27 5 626 808 197 0 0 chr17 5405647 5405789 -89866862 - RSINE1 SINE B4 -21 144 3 5 626 449 226 43 55 chr17 5408299 5408463 -89864188 - Lx4B LINE L1 -2 7056 6895 5 626 726 164 141 0 chr17 5408514 5408642 -89864009 - B1_Mus1 SINE Alu 0 148 3 5 626 921 120 15 0 chr17 5408754 5408887 -89863764 + B2_Mm2 SINE B2 2 136 -59 5 626 840 173 0 45 chr17 5408899 5409056 -89863595 + B1_Mur4 SINE Alu 1 150 0 5 626 366 323 48 82 chr17 5408910 5409116 -89863535 + B4A SINE B4 94 292 0 5 626 3386 99 14 0 chr17 5409144 5409648 -89863003 - Lx2B LINE L1 -644 6356 5846 5 626 3954 123 58 11 chr17 5409648 5410266 -89862385 + Lx2B LINE L1 6349 6995 -5 5 626 420 263 40 50 chr17 5410881 5411081 -89861570 - B3A SINE B2 0 198 1 5 626 258 159 23 0 chr17 5412770 5412814 -89859837 - tRNA-Val-GTY tRNA tRNA -31 45 1 5 626 25 0 0 0 chr17 5414480 5414505 -89858146 + AT_rich Low_complexity Low_complexity 1 25 0 5 626 227 211 200 53 chr17 5414948 5415043 -89857608 + MLT1I LTR MaLR 3 111 -300 5 626 630 296 195 16 chr17 5415297 5415543 -89857108 - B4 SINE B4 -1 291 2 5 626 240 217 22 0 chr17 5417015 5417061 -89855590 - B3A SINE B2 -118 80 34 5 626 547 297 5 61 chr17 5419274 5419471 -89853180 + B3A SINE B2 11 196 -2 5 626 3557 15 2 17 chr17 5421396 5421798 -89850853 + MTA_Mm LTR MaLR 1 396 0 5 626 359 21 21 0 chr17 5421842 5421890 -89850761 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 626 434 314 43 31 chr17 5422697 5422858 -89849793 - L2 LINE L2 -556 2863 2701 5 626 198 302 141 32 chr17 5423332 5423517 -89849134 - L2 LINE L2 -1403 2016 1812 5 626 272 176 412 0 chr17 5424306 5424374 -89848277 - PB1D7 SINE Alu -7 113 18 5 626 575 249 71 50 chr17 5424392 5424626 -89848025 + B4A SINE B4 70 290 -2 5 626 21 57 0 0 chr17 5425905 5425940 -89846711 + AT_rich Low_complexity Low_complexity 1 35 0 5 626 228 86 0 0 chr17 5425964 5425999 -89846652 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 5 626 479 234 79 21 chr17 5426052 5426192 -89846459 - B1F2 SINE Alu -1 148 1 5 626 3393 44 5 0 chr17 5426671 5427079 -89845572 - L1_Mus1 LINE L1 0 6567 6158 5 626 23 33 0 0 chr17 5427449 5427479 -89845172 + AT_rich Low_complexity Low_complexity 1 30 0 5 626 3006 41 57 0 chr17 5428200 5428569 -89844082 + RLTR10 LTR ERVK 1 390 0 5 626 188 229 108 59 chr17 5429606 5429708 -89842943 + L3b LINE CR1 190 296 -186 5 626 3942 223 87 39 chr17 5430522 5430704 -89841947 - Lx7 LINE L1 -111 7585 7389 5 626 258 32 0 0 chr17 5430704 5430735 -89841916 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 626 3942 223 87 39 chr17 5430735 5431701 -89840950 - Lx7 LINE L1 -308 7388 6382 5 626 325 197 0 83 chr17 5432686 5432758 -89839893 + ORR1C2 LTR MaLR 319 384 0 5 626 22 35 0 0 chr17 5433141 5433170 -89839481 + AT_rich Low_complexity Low_complexity 1 29 0 5 626 752 312 36 22 chr17 5435245 5435520 -89837131 + B4A SINE B4 2 280 -12 5 626 222 261 57 14 chr17 5435904 5435974 -89836677 + BC1_Mm scRNA scRNA 2 74 -78 5 626 291 204 257 0 chr17 5436673 5436786 -89835865 - Charlie1 DNA MER1_type -22 2759 2618 5 626 241 281 47 35 chr17 5436759 5436793 -89835858 + MT2B2 LTR ERVL 178 209 -375 5 626 1569 36 0 35 chr17 5436793 5436992 -89835659 + B2_Mm1a SINE B2 2 193 0 5 626 241 281 47 35 chr17 5436992 5437042 -89835609 + MT2B2 LTR ERVL 210 262 -322 5 626 541 129 0 31 chr17 5436993 5437089 -89835562 + B1_Mur3 SINE Alu 57 149 0 5 626 183 42 0 0 chr17 5437114 5437138 -89835513 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 5 626 1615 255 158 39 chr17 5437182 5437922 -89834729 - Charlie1 DNA MER1_type -119 2662 1835 5 626 321 284 51 89 chr17 5437966 5438202 -89834449 - Charlie1 DNA MER1_type -1066 1715 1489 5 626 242 211 33 6 chr17 5439053 5439139 -89833512 - L2b LINE L2 -2 3424 3325 5 626 277 326 68 23 chr17 5441313 5441445 -89831206 + MIRb SINE MIR 50 187 -81 5 626 357 24 0 0 chr17 5441446 5441488 -89831163 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 626 363 264 0 0 chr17 5442170 5442261 -89830390 + B1_Mur1 SINE Alu 54 144 -5 5 626 1065 237 44 101 chr17 5442281 5442755 -89829896 - LTRIS5 LTR ERV1 0 447 1 5 626 257 304 0 25 chr17 5442866 5442947 -89829704 + MTEb LTR MaLR 281 359 -20 5 626 201 246 42 42 chr17 5443142 5443214 -89829437 - MER5A DNA MER1_type -32 157 86 5 626 582 328 37 11 chr17 5443680 5443721 -89828930 - B3A SINE B2 -1 197 156 5 626 730 43 43 0 chr17 5443721 5443836 -89828815 + (TC)n Simple_repeat Simple_repeat 1 120 0 5 626 582 328 37 11 chr17 5443836 5443985 -89828666 - B3A SINE B2 -43 155 2 5 626 230 292 55 14 chr17 5444013 5444086 -89828565 + MER67C LTR ERV1 275 350 -361 5 626 414 0 0 0 chr17 5444235 5444281 -89828370 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 626 240 181 57 62 chr17 5444319 5444404 -89828247 + (ATGTG)n Simple_repeat Simple_repeat 2 86 0 5 626 180 77 0 0 chr17 5444404 5444430 -89828221 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 626 240 181 57 62 chr17 5444430 5444521 -89828130 + (ATGTG)n Simple_repeat Simple_repeat 1 91 0 5 626 180 77 0 0 chr17 5444576 5444602 -89828049 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 626 189 0 0 0 chr17 5444648 5444669 -89827982 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 626 195 42 0 0 chr17 5444752 5444776 -89827875 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 626 180 77 0 0 chr17 5444822 5444848 -89827803 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 626 180 0 0 0 chr17 5445030 5445050 -89827601 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 626 261 291 131 23 chr17 5446687 5446817 -89825834 + RMER15 LTR ERVL 343 486 -89 5 626 558 287 0 0 chr17 5447161 5447746 -89824905 + CT-rich Low_complexity Low_complexity 1 585 0 5 626 303 345 103 0 chr17 5447764 5447909 -89824742 - HAL1-3A_ME LINE L1 -419 2439 2280 5 626 589 220 59 8 chr17 5448076 5448195 -89824456 + ID_B1 SINE B4 100 224 0 5 626 345 322 74 8 chr17 5448954 5449076 -89823575 + MER91A DNA Tip100 67 196 0 5 626 543 69 0 0 chr17 5449165 5449237 -89823414 + (TCTA)n Simple_repeat Simple_repeat 1 72 0 5 626 360 0 0 0 chr17 5449237 5449276 -89823375 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 626 297 0 0 0 chr17 5451241 5451274 -89821377 + (TC)n Simple_repeat Simple_repeat 1 33 0 5 626 305 280 86 48 chr17 5452083 5452188 -89820463 + L1M5 LINE L1 5328 5436 -688 5 626 599 242 67 0 chr17 5453087 5453236 -89819415 + RSINE1 SINE B4 3 161 -4 5 626 273 183 0 0 chr17 5453244 5453304 -89819347 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 626 22 57 0 19 chr17 5453324 5453358 -89819293 + AT_rich Low_complexity Low_complexity 1 34 0 5 626 1231 54 0 0 chr17 5453358 5453505 -89819146 - B1_Mus2 SINE Alu 0 147 1 5 626 22 57 0 19 chr17 5453505 5453524 -89819127 + AT_rich Low_complexity Low_complexity 1 19 0 5 626 366 308 40 53 chr17 5453524 5453675 -89818976 + B1F2 SINE Alu 1 149 0 5 626 276 309 69 56 chr17 5453971 5454115 -89818536 - MamRep605 Unknown Unknown -710 166 21 5 626 605 329 127 63 chr17 5455117 5455448 -89817203 + MLT1A LTR MaLR 10 361 -13 5 626 1180 276 33 78 chr17 5455896 5456304 -89816347 - L1MA8 LINE L1 -3 6288 5893 5 626 351 191 247 0 chr17 5456304 5456393 -89816258 - PB1D9 SINE Alu -8 112 2 5 626 1180 279 31 96 chr17 5456393 5456533 -89816118 - L1MA8 LINE L1 -281 5908 5785 5 626 1293 76 23 0 chr17 5456533 5456704 -89815947 - B2_Mm2 SINE B2 -19 176 2 5 626 702 288 24 152 chr17 5456704 5456956 -89815695 - L1MA8 LINE L1 -405 5784 5555 5 626 854 293 14 56 chr17 5457185 5457471 -89815180 + B4A SINE B4 2 275 -17 5 626 429 36 0 0 chr17 5457477 5457532 -89815119 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 626 261 0 0 0 chr17 5457532 5457560 -89815091 + (GA)n Simple_repeat Simple_repeat 2 30 0 5 626 224 339 62 0 chr17 5458032 5458097 -89814554 + ID4_ SINE ID 12 80 -3 5 626 737 282 15 44 chr17 5458118 5458322 -89814329 + ID_B1 SINE B4 1 198 -26 5 626 180 97 0 0 chr17 5458477 5458508 -89814143 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 5 626 533 141 17 23 chr17 5458509 5458683 -89813968 + (CAGAGA)n Simple_repeat Simple_repeat 2 174 0 5 626 1391 111 91 14 chr17 5458937 5459147 -89813504 + URR1A DNA MER1_type 1 226 0 5 626 1660 196 63 0 chr17 5459607 5459938 -89812713 - RMER20A LTR ERVK -154 362 11 5 626 228 167 0 0 chr17 5459953 5460001 -89812650 + (TAAA)n Simple_repeat Simple_repeat 3 50 0 5 626 1755 155 62 54 chr17 5460348 5460716 -89811935 - RLTR11A LTR ERVK -148 380 10 5 626 255 272 82 50 chr17 5460722 5460881 -89811770 - L1MEg LINE L1 -324 5849 5686 5 626 285 326 119 52 chr17 5460974 5461168 -89811483 - MLT1H LTR MaLR -6 543 337 5 626 307 313 88 107 chr17 5461325 5461586 -89811065 - MLT1H LTR MaLR -293 256 1 5 626 345 313 87 23 chr17 5461591 5461856 -89810795 - L1MEg LINE L1 -611 5562 5281 5 626 1059 274 32 29 chr17 5461871 5462179 -89810472 + MT2A LTR ERVL 1 309 -224 5 626 1160 171 83 251 chr17 5462199 5462658 -89809993 - ORR1C2 LTR MaLR -2 382 1 5 626 351 292 107 53 chr17 5462663 5462869 -89809782 - L1MEg LINE L1 -1009 5137 4921 5 626 7491 51 3 0 chr17 5462883 5463790 -89808861 - L1Md_F2 LINE L1 -2 6580 5671 5 626 322 344 86 0 chr17 5463793 5463944 -89808707 - L1MEg LINE L1 -1360 4786 4623 5 626 448 255 99 45 chr17 5464036 5464237 -89808414 + B4 SINE B4 2 213 -79 5 626 755 108 8 0 chr17 5464252 5464381 -89808270 + (CA)n Simple_repeat Simple_repeat 1 130 0 5 626 338 294 52 46 chr17 5464602 5464755 -89807896 - L1MEg LINE L1 -1662 4484 4331 5 626 323 302 134 28 chr17 5464790 5465110 -89807541 - L1MEg LINE L1 -4823 1419 1066 5 626 1047 211 19 14 chr17 5465112 5465319 -89807332 - B3 SINE B2 0 216 9 5 626 299 254 98 53 chr17 5465349 5465448 -89807203 - L1MEg LINE L1 -5178 1064 949 5 626 1223 54 0 0 chr17 5465448 5465595 -89807056 - B1_Mus2 SINE Alu 0 147 1 6 626 299 254 98 53 chr17 5465595 5465832 -89806819 - L1MEg LINE L1 -5294 948 713 5 626 515 158 68 19 chr17 5465892 5465995 -89806656 - B1F2 SINE Alu 0 149 42 6 626 216 0 0 0 chr17 5466403 5466427 -89806224 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 626 1286 251 86 12 chr17 5466701 5467039 -89805612 + MTEa LTR MaLR 17 379 0 6 626 21 0 0 0 chr17 5467572 5467593 -89805058 + AT_rich Low_complexity Low_complexity 1 21 0 6 626 392 103 0 0 chr17 5467808 5467866 -89804785 - L1Md_F2 LINE L1 -1265 4618 4561 6 626 7550 68 7 0 chr17 5467863 5468825 -89803826 + L1Md_F2 LINE L1 4618 5586 -297 6 626 8177 39 21 0 chr17 5468826 5469798 -89802853 + L1Md_F2 LINE L1 5588 6579 -3 6 626 400 292 38 0 chr17 5469982 5470088 -89802563 - B1F SINE Alu -17 132 23 6 626 269 129 28 28 chr17 5470091 5470163 -89802488 + (TA)n Simple_repeat Simple_repeat 2 73 0 6 626 1374 256 76 5 chr17 5470392 5470761 -89801890 - MTD LTR MaLR 0 419 25 6 626 576 29 0 0 chr17 5471198 5471268 -89801383 + (CACAG)n Simple_repeat Simple_repeat 3 72 0 6 626 424 182 333 60 chr17 5471775 5471892 -89800759 + B1_Mur2 SINE Alu 1 149 0 6 626 21 0 0 0 chr17 5472050 5472071 -89800580 + AT_rich Low_complexity Low_complexity 1 21 0 6 626 702 230 0 7 chr17 5472075 5472215 -89800436 - B1_Mur1 SINE Alu -2 147 9 6 626 454 216 39 130 chr17 5472078 5472232 -89800419 - B4 SINE B4 -71 221 82 6 626 274 271 14 28 chr17 5472273 5472345 -89800306 - MTEb LTR MaLR -15 364 294 6 626 244 288 15 0 chr17 5472693 5472759 -89799892 - MTD LTR MaLR -291 68 2 6 626 1099 194 32 0 chr17 5472806 5473022 -89799629 - URR1B DNA MER1_type -2 223 1 6 626 612 268 51 31 chr17 5473045 5473241 -89799410 - MLT1B LTR MaLR -7 383 184 6 626 399 255 9 47 chr17 5473260 5473367 -89799284 - MLT1B LTR MaLR -287 103 1 6 626 315 130 0 0 chr17 5473850 5473904 -89798747 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 626 1137 99 94 0 chr17 5474363 5474534 -89798117 + B2_Mm2 SINE B2 1 187 -8 6 626 21 36 0 0 chr17 5474996 5475024 -89797627 + AT_rich Low_complexity Low_complexity 1 28 0 6 626 502 262 60 117 chr17 5475340 5475725 -89796926 - MLT1A0 LTR MaLR -2 363 1 6 626 243 344 72 100 chr17 5476609 5476951 -89795700 - ORR1D2 LTR MaLR -32 338 15 6 626 275 290 81 64 chr17 5476951 5477124 -89795527 + L1MEf LINE L1 632 807 -5435 6 626 231 180 19 57 chr17 5477142 5477195 -89795456 + PB1D7 SINE Alu 1 51 -69 6 626 361 322 59 0 chr17 5477153 5477271 -89795380 + ID_B1 SINE B4 90 214 -10 6 626 519 283 0 5 chr17 5477437 5477571 -89795080 + B1F2 SINE Alu 1 129 -20 6 626 716 190 30 48 chr17 5477639 5477805 -89794846 - RSINE1 SINE B4 0 165 3 6 626 291 121 35 0 chr17 5477850 5477908 -89794743 - Lx4B LINE L1 0 7058 6999 6 626 363 286 138 35 chr17 5477908 5478371 -89794280 + L1MEf LINE L1 1716 2226 -4016 6 626 538 277 102 119 chr17 5478491 5478635 -89794016 + MTE2a LTR MaLR 6 134 -245 6 626 3202 60 8 0 chr17 5478635 5479032 -89793619 - MTB LTR MaLR 0 400 1 6 626 538 277 102 119 chr17 5479032 5479182 -89793469 + MTE2a LTR MaLR 135 295 -84 6 626 182 37 37 0 chr17 5479213 5479240 -89793411 + (TTTG)n Simple_repeat Simple_repeat 4 31 0 6 626 271 206 127 0 chr17 5479371 5479434 -89793217 + ID4 SINE ID 2 72 -11 6 626 270 0 0 0 chr17 5479435 5479465 -89793186 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 626 235 267 69 10 chr17 5479482 5479584 -89793067 + L1MEf LINE L1 2901 3008 -3138 6 626 540 310 35 74 chr17 5480118 5480283 -89792368 + L1MEf LINE L1 3316 3475 -2671 6 626 4525 43 2 4 chr17 5480283 5480824 -89791827 - L1Md_F2 LINE L1 0 6582 6043 6 626 540 310 35 74 chr17 5480824 5480968 -89791683 + L1MEf LINE L1 3476 3613 -2533 6 626 207 162 0 0 chr17 5483051 5483088 -89789563 + CT-rich Low_complexity Low_complexity 3 39 0 6 626 1246 104 0 45 chr17 5483090 5483292 -89789359 - B2_Mm2 SINE B2 -1 194 2 6 626 686 292 116 20 chr17 5483457 5483804 -89788847 + MER73 LTR ERVL 224 620 -24 6 626 841 56 0 0 chr17 5483808 5483916 -89788735 + B1_Mus2 SINE Alu 40 147 0 6 626 216 135 0 0 chr17 5483916 5483953 -89788698 + (A)n Simple_repeat Simple_repeat 1 37 0 6 626 317 241 74 25 chr17 5483967 5484048 -89788603 + B4 SINE B4 181 265 -27 6 626 441 0 0 0 chr17 5484093 5484142 -89788509 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 626 25 31 0 0 chr17 5484278 5484310 -89788341 + AT_rich Low_complexity Low_complexity 1 32 0 6 626 271 335 72 24 chr17 5484310 5484518 -89788133 - Lx8 LINE L1 -13 7460 7243 6 626 4624 177 38 45 chr17 5484541 5485436 -89787215 - RMER19B LTR ERVK -12 890 2 6 626 1260 289 89 23 chr17 5485601 5486030 -89786621 - Lx8 LINE L1 -468 7005 6549 6 626 536 337 41 15 chr17 5486256 5486527 -89786124 + L1MC4 LINE L1 6795 7072 -970 6 626 312 275 16 40 chr17 5486592 5486717 -89785934 + GA-rich Low_complexity Low_complexity 3 124 0 6 626 793 120 97 102 chr17 5487083 5487269 -89785382 + B2_Mm2 SINE B2 2 186 -9 6 626 423 0 0 0 chr17 5487969 5488016 -89784635 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 626 387 0 0 0 chr17 5488016 5488058 -89784593 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 626 280 310 109 17 chr17 5488388 5488562 -89784089 + L1MC4 LINE L1 7482 7671 -371 6 626 1389 89 10 10 chr17 5489733 5489925 -89782726 + B2_Mm1t SINE B2 2 193 0 6 626 715 311 129 23 chr17 5490098 5490401 -89782250 + MLT1E1A LTR MaLR 342 676 -4 6 626 229 339 8 106 chr17 5490846 5490921 -89781730 + B4 SINE B4 22 83 -209 6 626 248 318 35 53 chr17 5490921 5491034 -89781617 + PB1D10 SINE Alu 1 111 -6 6 626 234 298 238 12 chr17 5491240 5491400 -89781251 + MIRb SINE MIR 47 242 -26 6 626 24 96 0 0 chr17 5493335 5493408 -89779243 + GC_rich Low_complexity Low_complexity 1 73 0 6 626 252 293 13 51 chr17 5496074 5496153 -89776498 - MTEb LTR MaLR -16 363 288 6 626 443 48 16 0 chr17 5496267 5496329 -89776322 + (GA)n Simple_repeat Simple_repeat 2 64 0 6 626 189 107 0 0 chr17 5496761 5496789 -89775862 + (CAT)n Simple_repeat Simple_repeat 2 29 0 6 626 1320 231 172 6 chr17 5496791 5497088 -89775563 + MTD LTR MaLR 25 376 -43 6 626 783 157 251 48 chr17 5497088 5497275 -89775376 + URR1B DNA MER1_type 1 225 0 6 626 1320 231 172 6 chr17 5497275 5497308 -89775343 + MTD LTR MaLR 377 410 -9 6 626 237 65 0 0 chr17 5497432 5497463 -89775188 + (G)n Simple_repeat Simple_repeat 1 31 0 6 626 586 203 34 97 chr17 5498378 5498553 -89774098 + RSINE1 SINE B4 2 165 0 6 626 207 203 27 55 chr17 5498584 5498657 -89773994 + CT-rich Low_complexity Low_complexity 2 72 0 6 626 495 0 0 0 chr17 5499590 5499645 -89773006 + (CTG)n Simple_repeat Simple_repeat 2 56 0 6 626 513 0 0 0 chr17 5499645 5499702 -89772949 + (TTC)n Simple_repeat Simple_repeat 3 59 0 6 626 1083 139 0 0 chr17 5499702 5499882 -89772769 + (TCC)n Simple_repeat Simple_repeat 1 180 0 6 626 990 42 0 0 chr17 5499882 5500000 -89772651 - B1_Mus1 SINE Alu -6 142 25 6 626 2319 77 29 0 chr17 5500108 5500418 -89772233 - ORR1A2 LTR MaLR -8 319 1 1 626 21 0 0 0 chr17 5500605 5500626 -89772025 + AT_rich Low_complexity Low_complexity 1 21 0 2 626 211 250 15 15 chr17 5500829 5500894 -89771757 + (TATG)n Simple_repeat Simple_repeat 4 68 0 3 626 501 62 0 0 chr17 5501010 5501075 -89771576 + (TATG)n Simple_repeat Simple_repeat 4 68 0 4 626 864 200 26 6 chr17 5501083 5501239 -89771412 - B3A SINE B2 -38 160 2 5 626 472 225 26 43 chr17 5501684 5501800 -89770851 - PB1D9 SINE Alu 0 120 7 6 626 508 251 22 71 chr17 5501863 5502047 -89770604 - B3A SINE B2 -16 182 8 7 626 1028 141 47 37 chr17 5502179 5502370 -89770281 + Lx2 LINE L1 6805 6997 0 8 626 351 227 189 0 chr17 5502614 5502746 -89769905 - L1MA6 LINE L1 -5 6295 6139 9 626 246 204 0 0 chr17 5503138 5503187 -89769464 - L1MC4 LINE L1 0 8042 7994 1 626 444 344 92 35 chr17 5503520 5503891 -89768760 - L1MEf LINE L1 -4125 2075 1684 1 626 440 262 39 62 chr17 5504097 5504227 -89768424 + PB1D9 SINE Alu 2 128 -21 1 626 387 56 0 0 chr17 5504332 5504386 -89768265 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 626 474 18 0 0 chr17 5504386 5504440 -89768211 + (TC)n Simple_repeat Simple_repeat 1 55 0 1 626 216 0 0 0 chr17 5504440 5504463 -89768188 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 626 344 321 54 5 chr17 5504540 5504725 -89767926 - L1MEf LINE L1 -4900 1300 1107 1 627 396 111 0 0 chr17 5506352 5506415 -89766236 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 627 582 103 0 0 chr17 5506839 5506926 -89765725 + (TG)n Simple_repeat Simple_repeat 2 88 0 1 627 24 0 0 0 chr17 5506967 5506991 -89765660 + AT_rich Low_complexity Low_complexity 1 24 0 1 627 743 169 255 38 chr17 5507903 5508087 -89764564 + URR1A DNA MER1_type 3 226 0 1 627 584 328 69 106 chr17 5508141 5508680 -89763971 + MLT1G1 LTR MaLR 57 575 -4 2 627 67 0 0 0 chr17 5508734 5508801 -89763850 + AT_rich Low_complexity Low_complexity 1 67 0 2 627 369 0 0 0 chr17 5509975 5510016 -89762635 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 627 542 233 8 32 chr17 5510016 5510140 -89762511 - RSINE1 SINE B4 -41 124 4 2 627 269 250 0 32 chr17 5510216 5510278 -89762373 + ID SINE ID 14 73 -151 2 627 276 227 0 0 chr17 5510231 5510287 -89762364 + ID4 SINE ID 26 81 -71 2 627 188 182 82 98 chr17 5512097 5512158 -89760493 - L2c LINE L2 -10 3377 3306 2 627 333 0 0 0 chr17 5513979 5514016 -89758635 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 627 216 0 0 0 chr17 5514016 5514039 -89758612 + (GA)n Simple_repeat Simple_repeat 1 24 0 2 627 2948 109 32 7 chr17 5514040 5514482 -89758169 - RLTR11B LTR ERVK 0 453 1 2 627 301 226 0 0 chr17 5514489 5514551 -89758100 - RSINE1 SINE B4 -37 128 67 3 627 316 343 74 0 chr17 5514821 5514929 -89757722 - MamRep1161 DNA TcMar -809 148 33 3 627 252 331 16 44 chr17 5515141 5515255 -89757396 - RMER12 LTR ERVK -453 869 758 3 627 952 296 53 14 chr17 5515255 5515536 -89757115 + B4A SINE B4 1 292 0 3 627 252 331 16 44 chr17 5515536 5515604 -89757047 - RMER12 LTR ERVK -565 757 692 3 627 191 100 33 0 chr17 5516329 5516359 -89756292 + L3 LINE CR1 3976 4006 -483 3 627 383 0 0 21 chr17 5517432 5517480 -89755171 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 627 454 248 37 29 chr17 5517785 5517931 -89754720 + L1MD2 LINE L1 5861 6007 -172 3 627 207 0 0 0 chr17 5518197 5518220 -89754431 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 3 627 2839 93 40 19 chr17 5518537 5518966 -89753685 + L1_Mus3 LINE L1 6201 6638 0 3 627 286 277 19 173 chr17 5518979 5519193 -89753458 + MTEb LTR MaLR 12 192 -167 3 627 293 301 7 42 chr17 5519194 5519336 -89753315 + CT-rich Low_complexity Low_complexity 1 137 0 4 627 425 267 84 113 chr17 5519336 5519539 -89753112 + MTEb LTR MaLR 163 377 -2 3 627 833 142 0 47 chr17 5521121 5521209 -89751442 + URR1B DNA MER1_type 83 163 -62 4 627 186 43 0 0 chr17 5521209 5521232 -89751419 + (TGGGGG)n Simple_repeat Simple_repeat 6 28 0 4 627 833 142 0 47 chr17 5521232 5521291 -89751360 + URR1B DNA MER1_type 164 222 -3 4 627 303 281 0 0 chr17 5522165 5522325 -89750326 + GA-rich Low_complexity Low_complexity 3 162 0 4 627 231 207 219 32 chr17 5522415 5522570 -89750081 - L2 LINE L2 -1410 2009 1826 4 627 212 158 0 0 chr17 5522624 5522662 -89749989 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 4 627 659 247 89 63 chr17 5522678 5523028 -89749623 - RLTR10D LTR ERVK 0 359 1 4 627 4092 250 25 41 chr17 5523028 5524681 -89747970 - IAP-d-int LTR ERVK 0 6542 4864 4 627 1205 7 0 0 chr17 5524706 5524847 -89747804 - L1Md_A LINE L1 0 6582 6442 4 627 4252 2 0 0 chr17 5524847 5525305 -89747346 + L1Md_A LINE L1 5978 6435 -147 4 627 5058 283 17 17 chr17 5525305 5526979 -89745672 - IAP-d-int LTR ERVK -1727 4815 3143 4 627 581 203 23 0 chr17 5526991 5527119 -89745532 - IAP-d-int LTR ERVK -6390 152 22 4 627 842 275 71 48 chr17 5527164 5527515 -89745136 - RLTR10D LTR ERVK 0 359 1 4 627 255 279 54 148 chr17 5527667 5527890 -89744761 + RMER15 LTR ERVL 345 546 -29 4 627 408 71 0 0 chr17 5527903 5527959 -89744692 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 627 1072 232 25 21 chr17 5527962 5528200 -89744451 - B4 SINE B4 -39 253 15 5 627 481 243 336 7 chr17 5528507 5528656 -89743995 + B3A SINE B2 1 198 0 5 627 221 224 16 49 chr17 5528683 5528744 -89743907 + B3A SINE B2 1 59 -139 5 627 387 0 0 0 chr17 5528919 5528962 -89743689 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 627 281 364 0 0 chr17 5529123 5529211 -89743440 + (TG)n Simple_repeat Simple_repeat 1 88 0 5 627 264 100 0 0 chr17 5529546 5529586 -89743065 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 627 491 335 15 70 chr17 5531487 5531686 -89740965 + B4 SINE B4 20 207 -85 5 627 369 0 0 0 chr17 5531691 5531732 -89740919 + (GA)n Simple_repeat Simple_repeat 2 42 0 5 627 711 193 222 22 chr17 5532110 5532290 -89740361 - B3 SINE B2 0 216 1 5 627 433 291 81 17 chr17 5532665 5532805 -89739846 + B1F SINE Alu 2 149 0 5 627 218 56 0 27 chr17 5533273 5533310 -89739341 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 6 627 1206 15 0 0 chr17 5533310 5533444 -89739207 - B1_Mus2 SINE Alu -13 134 1 6 627 504 93 0 0 chr17 5533763 5533838 -89738813 + (GA)n Simple_repeat Simple_repeat 2 76 0 6 627 697 178 140 7 chr17 5534513 5534649 -89738002 + MTD LTR MaLR 1 154 -265 6 627 329 178 204 11 chr17 5534650 5534744 -89737907 + MTD LTR MaLR 288 405 -14 6 627 631 296 12 0 chr17 5534794 5534956 -89737695 + RSINE1 SINE B4 2 165 0 6 627 246 260 86 49 chr17 5535098 5535260 -89737391 - L1M2 LINE L1 -1856 4287 4120 6 627 756 202 61 94 chr17 5535417 5535630 -89737021 + B3 SINE B2 1 206 -10 6 627 180 163 0 0 chr17 5535638 5535681 -89736970 + C-rich Low_complexity Low_complexity 1 43 0 6 627 214 385 39 33 chr17 5535797 5535950 -89736701 + L2b LINE L2 2919 3072 -303 6 627 662 135 14 14 chr17 5536694 5536837 -89735814 + G-rich Low_complexity Low_complexity 4 146 0 6 627 736 324 22 26 chr17 5537716 5537947 -89734704 - ORR1E LTR MaLR -128 231 2 7 627 226 309 50 30 chr17 5538047 5538147 -89734504 + Charlie9 DNA MER1_type 1 102 -2655 7 627 268 135 115 0 chr17 5538206 5538258 -89734393 - MLT2B5 LTR ERVL -8 547 490 7 627 399 89 0 0 chr17 5538268 5538324 -89734327 + (TCCA)n Simple_repeat Simple_repeat 2 57 0 7 627 1085 98 61 6 chr17 5538357 5538521 -89734130 - URR1A DNA MER1_type -47 179 7 7 627 375 285 164 82 chr17 5540024 5540280 -89732371 + B4 SINE B4 2 278 -14 7 627 846 141 0 0 chr17 5540338 5540484 -89732167 + (CA)n Simple_repeat Simple_repeat 2 147 0 7 627 189 0 0 0 chr17 5540484 5540505 -89732146 + (GA)n Simple_repeat Simple_repeat 2 22 0 7 627 846 158 0 0 chr17 5540505 5540609 -89732042 + (CA)n Simple_repeat Simple_repeat 1 104 0 7 627 314 125 0 0 chr17 5540610 5540658 -89731993 + HAL1-3A_ME LINE L1 1976 2023 -835 7 627 252 0 0 0 chr17 5540909 5540937 -89731714 + (CA)n Simple_repeat Simple_repeat 2 29 0 8 627 219 333 76 28 chr17 5541428 5541573 -89731078 + B4A SINE B4 89 240 -52 8 627 1334 270 63 19 chr17 5543059 5543422 -89729229 + MTE2b LTR MaLR 1 379 0 8 627 22 0 0 0 chr17 5543579 5543601 -89729050 + AT_rich Low_complexity Low_complexity 1 22 0 8 627 1616 96 0 0 chr17 5544713 5544933 -89727718 + URR1A DNA MER1_type 7 226 0 8 627 608 239 39 0 chr17 5545072 5545202 -89727449 + B1F2 SINE Alu 4 138 -11 8 627 1530 175 57 117 chr17 5545425 5545501 -89727150 - ORR1B1 LTR MaLR -8 386 317 8 627 2500 92 6 0 chr17 5545501 5545826 -89726825 - ORR1A2 LTR MaLR 0 327 1 8 627 1530 175 57 117 chr17 5545826 5546117 -89726534 - ORR1B1 LTR MaLR -78 316 41 8 627 3546 49 6 91 chr17 5546169 5546688 -89725963 - IAPLTR2_Mm LTR ERVK 0 475 1 8 627 509 149 49 11 chr17 5546889 5547154 -89725497 + (TG)n Simple_repeat Simple_repeat 1 274 0 8 627 729 177 78 84 chr17 5547173 5547352 -89725299 - B3A SINE B2 -16 182 5 9 627 183 278 191 18 chr17 5547481 5547591 -89725060 + MIRb SINE MIR 110 238 -30 9 627 472 51 0 60 chr17 5547917 5548001 -89724650 - L1Md_F2 LINE L1 0 6582 6504 9 627 250 333 36 0 chr17 5548107 5548191 -89724460 - B1F1 SINE Alu -21 128 42 9 627 283 303 86 47 chr17 5548387 5548515 -89724136 + MIRb SINE MIR 66 198 -70 9 627 260 282 28 0 chr17 5548936 5549007 -89723644 + ID4 SINE ID 2 74 -9 9 627 243 0 0 0 chr17 5550802 5550829 -89721822 + (TC)n Simple_repeat Simple_repeat 2 28 0 9 627 189 0 0 0 chr17 5550829 5550849 -89721802 + (TG)n Simple_repeat Simple_repeat 2 22 0 9 627 2419 272 149 26 chr17 5551587 5552455 -89720196 - RCHARR1 DNA MER1_type 0 974 1 9 627 350 328 69 15 chr17 5552528 5552658 -89719993 - RSINE1 SINE B4 -25 140 4 9 627 307 306 71 18 chr17 5554467 5554580 -89718071 + MIRm SINE MIR 36 154 -122 1 627 571 288 25 6 chr17 5554583 5554740 -89717911 + MTEa LTR MaLR 1 160 -219 1 627 318 189 48 95 chr17 5554733 5554838 -89717813 + MTEa LTR MaLR 118 217 -162 1 627 1093 210 47 17 chr17 5554844 5555137 -89717514 - ORR1D1 LTR MaLR -2 357 37 1 627 330 304 13 0 chr17 5555164 5555243 -89717408 + MTEa LTR MaLR 215 294 -85 1 627 420 268 24 31 chr17 5555233 5555360 -89717291 + Tigger5 DNA MER2_type 2262 2387 -19 1 627 229 266 31 0 chr17 5555399 5555463 -89717188 - MIRc SINE MIR -140 128 63 1 627 333 0 0 0 chr17 5555463 5555500 -89717151 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 627 1079 202 99 20 chr17 5555520 5555772 -89716879 - B4 SINE B4 -18 274 3 1 627 2884 15 0 0 chr17 5555805 5556135 -89716516 + MTA_Mm LTR MaLR 67 396 0 1 627 984 128 0 0 chr17 5556154 5556435 -89716216 + (CA)n Simple_repeat Simple_repeat 1 281 0 1 627 329 115 0 19 chr17 5556924 5556977 -89715674 - HAL1-3A_ME LINE L1 -831 2027 1976 1 627 586 195 9 9 chr17 5556977 5557311 -89715340 + (TG)n Simple_repeat Simple_repeat 1 333 0 1 627 837 306 71 11 chr17 5557353 5557621 -89715030 - B4A SINE B4 0 292 9 1 627 310 328 57 52 chr17 5558212 5558405 -89714246 + MER115 DNA Tip100 493 686 -7 1 627 360 0 0 0 chr17 5558410 5558450 -89714201 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 627 1054 205 57 5 chr17 5558553 5558764 -89713887 + URR1B DNA MER1_type 2 223 -2 1 627 1008 141 198 0 chr17 5559251 5559428 -89713223 - B3 SINE B2 -4 212 1 1 627 273 208 36 44 chr17 5559430 5559521 -89713130 - MIRm SINE MIR -59 149 66 1 627 3380 38 5 0 chr17 5559905 5560299 -89712352 + MTA_Mm LTR MaLR 1 396 0 1 627 254 326 72 43 chr17 5560397 5560616 -89712035 + MIRb SINE MIR 31 251 -11 1 627 684 292 12 0 chr17 5560892 5561053 -89711598 + B3A SINE B2 2 164 -34 1 627 321 26 0 0 chr17 5561053 5561091 -89711560 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 627 207 45 43 43 chr17 5561155 5561201 -89711450 + (TTTG)n Simple_repeat Simple_repeat 1 46 0 1 627 1276 21 7 0 chr17 5561201 5561346 -89711305 - B1_Mm SINE Alu -1 146 1 1 627 284 176 15 0 chr17 5562795 5562863 -89709788 + CT-rich Low_complexity Low_complexity 2 70 0 1 627 1098 236 108 35 chr17 5562978 5563320 -89709331 - Lx8 LINE L1 0 7473 7107 1 627 328 140 0 0 chr17 5563320 5563370 -89709281 - Lx8 LINE L1 -336 7137 7088 1 627 192 40 0 0 chr17 5563994 5564019 -89708632 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 627 692 103 0 9 chr17 5564097 5564205 -89708446 + (TTCC)n Simple_repeat Simple_repeat 3 109 0 1 627 945 205 79 15 chr17 5564747 5564950 -89707701 - B3 SINE B2 0 216 1 1 627 510 174 30 6 chr17 5565154 5565322 -89707329 + (TG)n Simple_repeat Simple_repeat 1 172 0 1 627 34 42 0 0 chr17 5565753 5565801 -89706850 + AT_rich Low_complexity Low_complexity 1 48 0 1 627 240 142 40 40 chr17 5565819 5565944 -89706707 + (TTATA)n Simple_repeat Simple_repeat 5 129 0 1 627 591 243 47 47 chr17 5565995 5566185 -89706466 - B3A SINE B2 -6 192 3 1 627 919 228 100 45 chr17 5566224 5566513 -89706138 + MTE2a LTR MaLR 55 359 -20 1 627 742 267 38 14 chr17 5568587 5568796 -89703855 + B3 SINE B2 3 216 0 1 627 1141 155 90 24 chr17 5570519 5570730 -89701921 + URR1A DNA MER1_type 2 226 0 1 627 532 240 0 10 chr17 5570790 5570891 -89701760 - PB1D7 SINE Alu -8 112 13 1 627 594 0 0 0 chr17 5571674 5571740 -89700911 + (TC)n Simple_repeat Simple_repeat 1 66 0 1 627 321 26 0 0 chr17 5572368 5572406 -89700245 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 627 710 315 6 22 chr17 5572457 5572639 -89700012 + B4A SINE B4 88 266 -26 1 627 261 0 0 0 chr17 5574060 5574089 -89698562 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 627 553 299 58 13 chr17 5574466 5574622 -89698029 - RSINE1 SINE B4 0 165 3 1 627 394 302 170 6 chr17 5574835 5575029 -89697622 - MLT1H1 LTR MaLR -280 299 16 1 627 290 143 57 9 chr17 5575088 5575194 -89697457 + (CA)n Simple_repeat Simple_repeat 2 112 0 1 627 225 254 28 14 chr17 5575867 5575939 -89696712 + L2a LINE L2 3348 3420 -6 1 627 934 279 41 56 chr17 5576334 5576732 -89695919 - L1MB7 LINE L1 -73 6111 5710 1 627 1084 252 108 22 chr17 5577877 5578201 -89694450 - MTEa LTR MaLR -1 378 27 1 627 416 375 55 36 chr17 5578613 5578975 -89693676 - MLT1I LTR MaLR -41 370 2 1 627 792 105 0 0 chr17 5579109 5579252 -89693399 + (TC)n Simple_repeat Simple_repeat 1 143 0 1 627 414 0 0 0 chr17 5579252 5579298 -89693353 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 627 543 285 80 8 chr17 5579382 5579592 -89693059 + MIR SINE MIR 2 223 -45 1 627 279 0 0 0 chr17 5579878 5579909 -89692742 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 1 627 631 161 16 48 chr17 5580142 5580266 -89692385 + PB1 SINE Alu 5 124 -3 1 627 222 246 0 0 chr17 5580605 5580666 -89691985 + (TTTG)n Simple_repeat Simple_repeat 2 62 0 1 627 339 276 203 0 chr17 5580671 5580794 -89691857 - B1F1 SINE Alu -1 148 1 1 627 844 143 6 6 chr17 5581124 5581293 -89691358 + (CA)n Simple_repeat Simple_repeat 2 170 0 1 627 1272 277 96 29 chr17 5581322 5581697 -89690954 - MTD LTR MaLR -14 405 6 1 627 286 306 50 31 chr17 5581724 5581862 -89690789 - MLT1A LTR MaLR -23 385 246 1 627 491 155 10 0 chr17 5582270 5582373 -89690278 + CT-rich Low_complexity Low_complexity 1 104 0 1 627 1270 72 56 0 chr17 5582662 5582842 -89689809 + B2_Mm2 SINE B2 6 195 0 1 627 653 283 73 67 chr17 5582846 5583187 -89689464 - ORR1E LTR MaLR -16 343 1 1 627 282 116 0 0 chr17 5584633 5584676 -89687975 + (ATGGTG)n Simple_repeat Simple_repeat 4 46 0 1 627 519 151 0 0 chr17 5584869 5584962 -89687689 + (TG)n Simple_repeat Simple_repeat 2 94 0 1 627 2134 116 51 0 chr17 5586706 5587017 -89685634 + ORR1A2 LTR MaLR 1 327 0 1 627 182 174 0 21 chr17 5587652 5587699 -89684952 + (CAT)n Simple_repeat Simple_repeat 2 47 0 1 627 507 292 23 8 chr17 5589329 5589460 -89683191 - ID_B1 SINE B4 -8 216 84 1 627 23 33 0 0 chr17 5589529 5589559 -89683092 + AT_rich Low_complexity Low_complexity 1 30 0 1 627 815 204 105 14 chr17 5590015 5590234 -89682417 - B4A SINE B4 -12 280 42 1 627 8625 31 1 0 chr17 5590318 5591382 -89681269 - L1Md_F2 LINE L1 -13 6569 5505 1 627 198 260 60 0 chr17 5591738 5591788 -89680863 - L2b LINE L2 -3 3423 3371 1 627 316 319 50 8 chr17 5591899 5592019 -89680632 - L2b LINE L2 -61 3314 3190 1 627 429 20 0 0 chr17 5592264 5592314 -89680337 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 627 394 298 27 41 chr17 5592597 5592744 -89679907 + RSINE1 SINE B4 2 146 -19 1 627 1322 201 144 35 chr17 5593344 5593720 -89678931 - MTD LTR MaLR 0 419 3 1 627 198 118 0 0 chr17 5594223 5594257 -89678394 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 627 462 265 87 87 chr17 5594485 5594646 -89678005 - ID_B1 SINE B4 -59 233 73 1 627 289 293 104 42 chr17 5594713 5594809 -89677842 + MIRm SINE MIR 174 275 -1 1 627 306 298 92 112 chr17 5595571 5595692 -89676959 - B4A SINE B4 0 292 176 1 627 361 53 0 35 chr17 5595692 5595750 -89676901 + (TTAGGG)n Simple_repeat Simple_repeat 1 56 0 1 627 306 298 92 112 chr17 5595750 5595923 -89676728 - B4A SINE B4 -117 175 4 1 627 207 234 152 31 chr17 5596161 5596234 -89676417 + L2b LINE L2 3304 3426 0 1 627 191 268 0 51 chr17 5597882 5597941 -89674710 - MIRc SINE MIR -101 167 112 1 627 795 241 23 103 chr17 5598449 5598759 -89673892 - B4A SINE B4 0 292 8 1 627 285 51 0 0 chr17 5598981 5599020 -89673631 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 627 1744 187 42 52 chr17 5601107 5601533 -89671118 - ORR1B1 LTR MaLR -4 370 1 1 627 827 233 97 19 chr17 5601533 5601735 -89670916 - MTE2b LTR MaLR -160 219 2 1 627 604 290 201 18 chr17 5601753 5602136 -89670515 + MLT1C LTR MaLR 9 461 -6 1 627 37 23 0 0 chr17 5603230 5603274 -89669377 + AT_rich Low_complexity Low_complexity 1 44 0 1 627 497 311 106 70 chr17 5603733 5604092 -89668559 - MLT1A LTR MaLR -2 372 1 1 627 269 313 128 76 chr17 5604394 5604698 -89667953 - L2a LINE L2 -4 3422 3103 1 627 243 0 0 0 chr17 5604728 5604755 -89667896 + (GA)n Simple_repeat Simple_repeat 2 28 0 1 627 234 0 0 0 chr17 5605773 5605799 -89666852 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 627 360 0 0 0 chr17 5606743 5606783 -89665868 + (TCTG)n Simple_repeat Simple_repeat 4 43 0 1 627 261 0 0 0 chr17 5606998 5607027 -89665624 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 627 21 36 0 0 chr17 5607201 5607229 -89665422 + AT_rich Low_complexity Low_complexity 1 28 0 1 627 567 355 114 18 chr17 5607524 5607980 -89664671 + L1ME3B LINE L1 5399 5898 -342 1 627 279 0 0 0 chr17 5608083 5608114 -89664537 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 627 428 238 0 0 chr17 5608120 5608204 -89664447 - B4A SINE B4 -208 84 1 1 627 838 271 24 143 chr17 5609053 5609182 -89663469 + ORR1D2 LTR MaLR 1 115 -255 1 627 4569 91 71 22 chr17 5609182 5609539 -89663112 + RMER17A LTR ERVK 1 385 -366 1 627 225 0 0 0 chr17 5609539 5609564 -89663087 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 627 4569 91 71 22 chr17 5609564 5609922 -89662729 + RMER17A LTR ERVK 386 750 -1 1 627 838 271 24 143 chr17 5609922 5610210 -89662441 + ORR1D2 LTR MaLR 116 368 -2 1 627 884 139 0 11 chr17 5610414 5610596 -89662055 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 627 588 214 0 0 chr17 5610640 5610818 -89661833 + (TG)n Simple_repeat Simple_repeat 2 179 0 1 627 216 0 0 0 chr17 5610833 5610857 -89661794 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 627 457 289 54 79 chr17 5611255 5611382 -89661269 - B3A SINE B2 0 198 78 1 627 3112 61 10 10 chr17 5611382 5611778 -89660873 + MTA_Mm LTR MaLR 1 396 0 2 627 457 289 54 79 chr17 5611778 5611853 -89660798 - B3A SINE B2 -121 77 2 1 627 1165 82 0 0 chr17 5611890 5612036 -89660615 - B1_Mus2 SINE Alu -1 146 1 2 627 441 264 43 158 chr17 5613187 5613371 -89659280 + RSINE1 SINE B4 3 165 0 2 627 1213 144 98 15 chr17 5613990 5614195 -89658456 + URR1A DNA MER1_type 5 226 0 2 627 318 310 110 0 chr17 5614280 5614425 -89658226 - HAL1 LINE L1 -846 1661 1501 2 627 321 279 138 8 chr17 5615995 5616118 -89656533 + MLT1A1 LTR MaLR 265 403 -5 2 627 2761 144 123 15 chr17 5616518 5617046 -89655605 - RMER4B LTR ERVK 0 585 1 2 627 274 302 161 11 chr17 5617046 5617133 -89655518 - ID_B1 SINE B4 -123 101 2 2 627 1005 266 106 21 chr17 5617898 5618228 -89654423 + ORR1E LTR MaLR 2 359 0 2 627 262 333 68 10 chr17 5618336 5618439 -89654212 - MIR3 SINE MIR -29 179 71 2 627 511 282 66 58 chr17 5620776 5621002 -89651649 - L1ME3A LINE L1 -19 6154 5927 2 627 652 239 94 50 chr17 5621021 5621231 -89651420 - B3A SINE B2 -6 189 1 2 627 494 311 11 62 chr17 5621647 5621825 -89650826 + B4A SINE B4 7 175 -117 2 627 420 20 0 0 chr17 5623230 5623279 -89649372 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 627 23 33 0 0 chr17 5624512 5624542 -89648109 + AT_rich Low_complexity Low_complexity 1 30 0 2 627 1989 234 93 28 chr17 5624743 5624756 -89647895 - RMER15 LTR ERVL 0 575 564 2 627 2647 53 19 0 chr17 5624756 5625077 -89647574 - ORR1A2 LTR MaLR 0 327 1 2 627 1989 234 93 28 chr17 5625077 5625603 -89647048 - RMER15 LTR ERVL -12 563 1 2 627 26 0 0 0 chr17 5626227 5626253 -89646398 + AT_rich Low_complexity Low_complexity 1 26 0 2 627 908 155 0 26 chr17 5626756 5626908 -89645743 - B1_Mur3 SINE Alu 0 149 2 2 627 241 261 87 43 chr17 5627280 5627372 -89645279 + RLTR13D1 LTR ERVK 11 106 -700 2 627 549 297 120 0 chr17 5627389 5627598 -89645053 - MLT1A0 LTR MaLR -3 362 129 2 627 338 297 10 19 chr17 5628218 5628321 -89644330 + PB1D10 SINE Alu 1 102 -15 2 627 321 89 0 0 chr17 5628358 5628403 -89644248 + (GGGA)n Simple_repeat Simple_repeat 1 45 0 2 627 884 36 9 0 chr17 5628405 5628517 -89644134 + (GAA)n Simple_repeat Simple_repeat 2 114 0 2 627 21 36 0 0 chr17 5628584 5628612 -89644039 + AT_rich Low_complexity Low_complexity 1 28 0 2 627 918 76 0 0 chr17 5628788 5628907 -89643744 + B2_Mm2 SINE B2 4 122 -73 2 627 21 36 0 0 chr17 5628919 5628947 -89643704 + AT_rich Low_complexity Low_complexity 1 28 0 2 627 626 331 210 19 chr17 5630139 5630549 -89642102 - MLT1F2 LTR MaLR -15 545 58 2 627 337 258 184 59 chr17 5630589 5630772 -89641879 + MLT1A1 LTR MaLR 1 198 -210 2 627 335 295 116 0 chr17 5630890 5630985 -89641666 + PB1D10 SINE Alu 4 109 -8 2 627 241 354 60 9 chr17 5631550 5631708 -89640943 - MIR SINE MIR -91 177 9 2 627 1282 240 73 7 chr17 5632136 5632438 -89640213 - MTE2b LTR MaLR -13 366 45 2 627 1407 170 71 32 chr17 5633584 5633894 -89638757 - RLTRETN_Mm LTR ERVK 0 322 1 2 627 777 213 147 41 chr17 5634145 5634390 -89638261 + Lx8 LINE L1 7192 7462 -11 2 627 327 250 170 20 chr17 5634908 5635055 -89637596 + Lx8 LINE L1 7233 7401 -72 2 627 1010 195 49 20 chr17 5635087 5635291 -89637360 - B3 SINE B2 -6 210 1 2 627 795 80 0 0 chr17 5635812 5635924 -89636727 + (CA)n Simple_repeat Simple_repeat 1 112 0 2 628 1424 208 25 3 chr17 5636465 5636749 -89635902 + ERVL-int LTR ERVL 4381 4670 -1087 2 628 246 275 0 36 chr17 5637635 5637718 -89634933 + CT-rich Low_complexity Low_complexity 2 81 0 2 628 21 36 0 0 chr17 5638000 5638028 -89634623 + AT_rich Low_complexity Low_complexity 1 28 0 2 628 262 293 110 31 chr17 5638416 5638543 -89634108 - L2a LINE L2 -13 3413 3277 2 628 513 277 38 120 chr17 5639465 5639781 -89632870 + B4A SINE B4 3 292 0 2 628 467 235 34 0 chr17 5639860 5639979 -89632672 + LTR90A LTR LTR 854 976 0 2 628 646 289 94 30 chr17 5640601 5640797 -89631854 + B4A SINE B4 1 209 -83 2 628 1950 132 19 176 chr17 5640797 5641264 -89631387 - ORR1B1 LTR MaLR 0 394 1 2 628 397 271 24 0 chr17 5641264 5641348 -89631303 + B4A SINE B4 207 292 0 2 628 288 0 0 0 chr17 5641413 5641445 -89631206 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 628 393 58 0 0 chr17 5642440 5642492 -89630159 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 628 286 321 122 73 chr17 5642582 5642787 -89629864 - B4 SINE B4 -19 273 59 2 628 252 233 233 52 chr17 5644118 5644290 -89628361 - L1MC4 LINE L1 -28 8014 7812 2 628 809 276 71 29 chr17 5644590 5644954 -89627697 + MTE2a LTR MaLR 1 379 0 2 628 477 252 9 9 chr17 5645456 5645564 -89627087 - MLT1A1 LTR MaLR -2 406 299 2 628 434 268 109 79 chr17 5647527 5647794 -89624857 - B4 SINE B4 -16 276 2 2 628 5367 59 0 5 chr17 5648224 5648886 -89623765 + L1_Mus1 LINE L1 5909 6567 0 2 628 31 68 0 0 chr17 5649016 5649075 -89623576 + AT_rich Low_complexity Low_complexity 1 59 0 2 628 419 181 72 0 chr17 5649297 5649380 -89623271 - MTE2b LTR MaLR -4 375 287 2 628 2193 141 74 30 chr17 5649386 5649780 -89622871 - MTC LTR MaLR -10 411 1 2 628 927 261 129 41 chr17 5649780 5650044 -89622607 - MTE2b LTR MaLR -88 291 4 2 628 519 247 47 57 chr17 5651578 5651771 -89620880 + L1MB7 LINE L1 3049 3239 -2907 2 628 511 333 191 20 chr17 5651811 5652516 -89620135 + L1MB7 LINE L1 5340 6165 -19 2 628 243 154 0 0 chr17 5653786 5653825 -89618826 + ID4 SINE ID 2 40 -43 2 628 240 111 0 0 chr17 5654589 5654625 -89618026 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 628 395 296 99 43 chr17 5654637 5654778 -89617873 - B4A SINE B4 -51 241 93 2 628 188 169 0 96 chr17 5654883 5655080 -89617571 + (CCA)n Simple_repeat Simple_repeat 1 178 0 2 628 350 237 63 4 chr17 5655231 5655326 -89617325 - B4A SINE B4 -64 101 1 2 628 284 48 24 0 chr17 5655375 5655417 -89617234 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 628 810 40 0 0 chr17 5655425 5655525 -89617126 - B1_Mus1 SINE Alu -47 101 2 2 628 487 179 67 89 chr17 5655525 5655561 -89617090 - ID SINE ID -144 80 48 2 628 526 179 0 102 chr17 5655525 5655543 -89617108 - MT2B LTR ERVL -346 255 150 2 628 251 141 0 15 chr17 5655857 5655922 -89616729 + T-rich Low_complexity Low_complexity 2 65 0 2 628 2757 18 79 6 chr17 5656198 5656528 -89616123 - IAPEY2_LTR LTR ERVK -3 354 1 2 628 405 129 0 0 chr17 5657951 5658021 -89614630 + (TCCCC)n Simple_repeat Simple_repeat 4 73 0 2 628 520 241 52 15 chr17 5658092 5658227 -89614424 - B1F SINE Alu 0 149 10 2 628 246 342 0 44 chr17 5658820 5658933 -89613718 - MIR SINE MIR -56 152 45 2 628 326 274 55 28 chr17 5658994 5659103 -89613548 + MER5A1 DNA MER1_type 2 113 -53 2 628 994 282 10 44 chr17 5659323 5659616 -89613035 + B4A SINE B4 10 292 0 2 628 272 318 87 43 chr17 5659684 5659799 -89612852 + MIR SINE MIR 15 134 -128 2 628 509 269 86 39 chr17 5660080 5660312 -89612339 - Charlie5 DNA MER1_type 0 2624 2382 2 628 187 349 0 0 chr17 5660597 5660660 -89611991 - L2b LINE L2 -2 3373 3311 2 628 256 300 36 91 chr17 5660801 5660911 -89611740 - MER5A DNA MER1_type 0 189 86 2 628 304 239 50 80 chr17 5660891 5660960 -89611691 + B4 SINE B4 32 97 -195 2 628 572 209 109 22 chr17 5660960 5661097 -89611554 + B3 SINE B2 1 149 -67 2 628 480 35 0 0 chr17 5661109 5661167 -89611484 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 628 648 315 67 6 chr17 5661184 5661363 -89611288 + B4 SINE B4 85 274 -18 2 628 243 0 0 0 chr17 5661778 5661805 -89610846 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 628 8672 21 1 1 chr17 5661813 5663350 -89609301 - L1Md_T LINE L1 -1 6581 5046 2 628 795 253 63 0 chr17 5663981 5664171 -89608480 + B3 SINE B2 1 202 -14 2 628 863 257 86 24 chr17 5664237 5664492 -89608159 + B4A SINE B4 5 275 -17 2 628 222 260 0 0 chr17 5664517 5664590 -89608061 + (CA)n Simple_repeat Simple_repeat 2 74 0 2 628 284 365 101 12 chr17 5665059 5665228 -89607423 - MIRb SINE MIR -11 257 74 2 628 631 287 31 111 chr17 5666456 5666790 -89605861 - MER33 DNA MER1_type -22 302 1 2 628 776 141 0 7 chr17 5667140 5667276 -89605375 + (GGAA)n Simple_repeat Simple_repeat 3 137 0 2 628 180 77 0 0 chr17 5667273 5667299 -89605352 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 2 628 798 254 132 20 chr17 5667510 5667759 -89604892 + B4 SINE B4 16 292 0 2 628 238 192 0 0 chr17 5667770 5667822 -89604829 + GA-rich Low_complexity Low_complexity 1 52 0 2 628 3199 53 8 2 chr17 5668078 5668474 -89604177 - MTB LTR MaLR -2 398 1 2 628 274 279 103 0 chr17 5669374 5669442 -89603209 + BC1_Mm scRNA scRNA 14 88 -64 2 628 250 327 9 0 chr17 5670419 5670526 -89602125 + Ricksha_c DNA MuDR 347 454 -1594 2 628 302 232 55 86 chr17 5670868 5671037 -89601614 + MTEb LTR MaLR 204 379 0 2 628 358 234 0 61 chr17 5671767 5671849 -89600802 - ORR1E-int LTR MaLR 0 1509 1433 2 628 339 25 0 0 chr17 5672029 5672069 -89600582 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 628 512 265 28 4 chr17 5672797 5672994 -89599657 - ORR1E LTR MaLR -124 235 1 2 628 910 189 94 25 chr17 5674256 5674457 -89598194 - B3 SINE B2 0 216 2 2 628 405 0 0 0 chr17 5674689 5674734 -89597917 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 628 397 311 90 26 chr17 5674926 5675081 -89597570 + RSINE1 SINE B4 1 165 0 2 628 1235 54 0 0 chr17 5675109 5675256 -89597395 - B1_Mm SINE Alu 0 147 1 2 628 1722 175 45 0 chr17 5676783 5677075 -89595576 - ORR1D1 LTR MaLR 0 374 70 3 628 229 286 0 0 chr17 5677086 5677135 -89595516 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 628 234 0 0 0 chr17 5677166 5677192 -89595459 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 3 628 1124 72 0 0 chr17 5677192 5677330 -89595321 - B1_Mus2 SINE Alu -9 138 1 3 628 2729 157 131 34 chr17 5677360 5677987 -89594664 + RMER6C LTR ERVK 3 690 0 3 628 254 222 63 0 chr17 5678645 5678708 -89593943 + LTR82B Low_complexity ERVL 533 599 -231 3 628 494 323 6 30 chr17 5678772 5678935 -89593716 - MER5A1 DNA MER1_type 0 166 8 3 628 805 243 43 10 chr17 5678935 5679143 -89593508 - MER20 DNA MER1_type -3 216 2 3 628 22 0 0 0 chr17 5681028 5681050 -89591601 + AT_rich Low_complexity Low_complexity 1 22 0 3 628 311 290 76 42 chr17 5681809 5681953 -89590698 + MER5B DNA MER1_type 2 150 -28 3 628 183 207 66 49 chr17 5682106 5682167 -89590484 - L2 LINE L2 -3281 138 77 3 628 404 279 3 56 chr17 5682390 5682480 -89590171 + RSINE1 SINE B4 3 90 -75 3 628 1521 78 13 21 chr17 5682480 5682715 -89589936 + L1_Mus3 LINE L1 6406 6638 0 3 628 404 276 0 58 chr17 5682715 5682741 -89589910 + RSINE1 SINE B4 91 114 -51 3 628 234 62 0 0 chr17 5682750 5682782 -89589869 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 628 21 0 0 0 chr17 5682872 5682893 -89589758 + AT_rich Low_complexity Low_complexity 1 21 0 3 628 15188 57 15 0 chr17 5682965 5685067 -89587584 - L1Md_F2 LINE L1 -548 6034 3897 3 628 381 117 0 0 chr17 5687017 5687077 -89585574 + (CTG)n Simple_repeat Simple_repeat 2 61 0 3 628 237 174 18 35 chr17 5688212 5688325 -89584326 + (CAGAGA)n Simple_repeat Simple_repeat 6 116 0 3 628 348 169 0 0 chr17 5688302 5688379 -89584272 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 628 228 330 105 47 chr17 5688920 5689111 -89583540 + MIRb SINE MIR 35 236 -32 3 628 818 278 63 8 chr17 5689197 5689465 -89583186 + B4A SINE B4 5 287 -5 3 628 194 0 39 0 chr17 5689491 5689517 -89583134 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 628 412 307 106 7 chr17 5689819 5689960 -89582691 - RSINE1 SINE B4 -9 156 2 3 628 668 198 86 43 chr17 5690215 5690404 -89582247 - B3 SINE B2 0 216 26 3 628 399 248 50 79 chr17 5691638 5691704 -89580947 + ID_B1 SINE B4 19 154 -70 3 628 568 68 0 0 chr17 5691704 5691778 -89580873 + B1_Mus2 SINE Alu 1 74 -73 3 628 22 35 0 0 chr17 5691786 5691815 -89580836 + AT_rich Low_complexity Low_complexity 1 29 0 3 628 1615 290 60 19 chr17 5692134 5692717 -89579934 - Lx8 LINE L1 -124 7349 6743 3 628 333 68 0 0 chr17 5692729 5692773 -89579878 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 628 221 0 0 33 chr17 5693810 5693840 -89578811 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 3 628 898 153 0 7 chr17 5694184 5694329 -89578322 + B1_Mur2 SINE Alu 5 148 -1 3 628 2216 104 0 79 chr17 5696094 5696448 -89576203 - ORR1A3 LTR MaLR 0 326 1 3 628 3641 88 14 47 chr17 5697205 5697755 -89574896 + Lx LINE L1 6123 6654 0 3 628 236 311 65 50 chr17 5697874 5698013 -89574638 - MamRep605 Unknown Unknown -243 633 493 3 628 857 186 25 98 chr17 5698173 5698376 -89574275 - B3A SINE B2 -9 189 2 3 628 374 20 40 0 chr17 5698800 5698850 -89573801 + (TCCC)n Simple_repeat Simple_repeat 2 53 0 3 628 326 107 18 0 chr17 5699202 5699258 -89573393 + (TCCC)n Simple_repeat Simple_repeat 4 60 0 3 628 488 284 67 89 chr17 5699945 5700169 -89572482 + B4 SINE B4 11 229 -63 3 628 1193 80 0 9 chr17 5700223 5700454 -89572197 + (CA)n Simple_repeat Simple_repeat 1 228 0 3 628 3012 61 35 8 chr17 5702730 5703124 -89569527 - MTB_Mm LTR MaLR 0 407 3 3 628 230 29 0 56 chr17 5704337 5704373 -89568278 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 3 628 1180 268 21 24 chr17 5705178 5705284 -89567367 + B4 SINE B4 3 105 -187 3 628 3352 43 2 5 chr17 5705284 5705681 -89566970 - MTA_Mm LTR MaLR 0 396 1 3 628 7659 70 14 74 chr17 5705681 5706849 -89565802 - MTA_Mm-int LTR MaLR 0 1098 1 3 628 3290 43 5 5 chr17 5706849 5707245 -89565406 - MTA_Mm LTR MaLR 0 396 1 3 628 1180 268 21 24 chr17 5707245 5707427 -89565224 + B4 SINE B4 106 290 -2 3 628 243 204 0 0 chr17 5707427 5707481 -89565170 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 628 185 219 24 0 chr17 5707498 5707539 -89565112 + MIRb SINE MIR 189 230 -38 3 628 721 184 36 7 chr17 5708073 5708210 -89564441 + B1_Mur2 SINE Alu 3 143 -6 3 628 203 170 0 21 chr17 5708228 5708276 -89564375 + A-rich Low_complexity Low_complexity 5 51 0 3 628 225 0 0 0 chr17 5708358 5708383 -89564268 + (TTCTG)n Simple_repeat Simple_repeat 2 26 0 3 628 688 211 0 0 chr17 5708384 5708517 -89564134 - B1_Mur4 SINE Alu -13 137 5 3 628 363 296 183 12 chr17 5710738 5710902 -89561749 - L1MC1 LINE L1 -17 6316 6125 3 628 246 32 0 0 chr17 5711980 5712011 -89560640 + (CCCCAG)n Simple_repeat Simple_repeat 3 33 0 3 628 402 21 0 0 chr17 5715912 5715959 -89556692 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 628 495 0 0 0 chr17 5715959 5716013 -89556638 + (GA)n Simple_repeat Simple_repeat 1 55 0 3 628 997 164 86 59 chr17 5716472 5716692 -89555959 - URR1A DNA MER1_type 0 226 1 3 628 504 269 0 0 chr17 5718079 5718387 -89554264 + (TCTCTG)n Simple_repeat Simple_repeat 1 308 0 3 628 306 0 0 0 chr17 5718643 5718677 -89553974 + (TC)n Simple_repeat Simple_repeat 1 34 0 3 628 342 0 0 0 chr17 5718677 5718714 -89553937 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 628 346 258 62 37 chr17 5720957 5721130 -89551521 + MIR SINE MIR 8 175 -93 3 628 833 261 15 15 chr17 5722058 5722264 -89550387 - ID_B1 SINE B4 -17 207 2 3 628 234 324 88 0 chr17 5722285 5722387 -89550264 + MIR SINE MIR 118 228 -34 3 628 1148 247 47 36 chr17 5722616 5722893 -89549758 + B4 SINE B4 3 282 -10 3 628 3224 136 90 11 chr17 5724116 5724658 -89547993 - RMER4B LTR ERVK 0 585 1 3 628 186 316 76 0 chr17 5725729 5725808 -89546843 + L3 LINE CR1 713 797 -3692 3 628 878 274 15 88 chr17 5726060 5726366 -89546285 + B4A SINE B4 12 292 0 3 628 288 0 0 0 chr17 5726502 5726534 -89546117 + (T)n Simple_repeat Simple_repeat 1 32 0 3 628 419 276 84 19 chr17 5727512 5727667 -89544984 - MIR SINE MIR -32 230 66 3 628 957 248 76 67 chr17 5727678 5727994 -89544657 + MTC-int LTR MaLR 940 1258 0 3 628 2174 165 49 22 chr17 5727994 5728403 -89544248 + MTC LTR MaLR 1 420 -1 3 628 568 323 146 0 chr17 5728486 5728746 -89543905 - MER57E1 LTR ERV1 -32 340 43 3 628 1279 97 463 4 chr17 5729045 5729315 -89543336 - ORR1B1 LTR MaLR 0 394 1 3 628 1267 88 71 0 chr17 5729645 5729827 -89542824 + B2_Mm2 SINE B2 1 195 0 3 628 527 150 26 61 chr17 5729954 5730118 -89542533 - MTD LTR MaLR 0 421 233 3 628 251 283 118 29 chr17 5730223 5730325 -89542326 - MLT1C LTR MaLR -5 462 352 3 628 1493 272 44 0 chr17 5731018 5731378 -89541273 - MTE2b LTR MaLR 0 379 4 3 628 432 0 0 0 chr17 5731792 5731840 -89540811 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 628 294 270 112 35 chr17 5734053 5734222 -89538429 + MIR3 SINE MIR 6 187 -21 3 628 903 292 73 10 chr17 5734448 5734860 -89537791 - L1M4 LINE L1 -2322 3824 3387 3 628 615 275 6 64 chr17 5735035 5735206 -89537445 + RSINE1 SINE B4 1 161 -4 3 628 1159 43 36 0 chr17 5735278 5735418 -89537233 - B1_Mus1 SINE Alu -2 146 2 3 628 288 0 0 0 chr17 5735457 5735489 -89537162 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 628 420 122 0 0 chr17 5735489 5735571 -89537080 + (GA)n Simple_repeat Simple_repeat 2 83 0 3 628 490 292 88 42 chr17 5735623 5735884 -89536767 - B4A SINE B4 -18 274 2 3 628 330 67 0 0 chr17 5736193 5736238 -89536413 + (TC)n Simple_repeat Simple_repeat 1 45 0 3 628 243 146 89 18 chr17 5736341 5736397 -89536254 - LTR78 LTR ERV1 -830 474 415 3 628 777 265 79 122 chr17 5736690 5737068 -89535583 + ORR1D2 LTR MaLR 5 366 -4 3 628 387 282 94 57 chr17 5737265 5737368 -89535283 - MTEa LTR MaLR -180 199 106 3 628 564 56 0 0 chr17 5737368 5737440 -89535211 + (TC)n Simple_repeat Simple_repeat 1 72 0 3 628 387 282 94 57 chr17 5737440 5737528 -89535123 - MTEa LTR MaLR -274 105 1 3 628 234 156 0 0 chr17 5737961 5738006 -89534645 + A-rich Low_complexity Low_complexity 1 45 0 3 628 1902 259 136 18 chr17 5738049 5738762 -89533889 - Lx7 LINE L1 -384 7312 6516 3 628 25 31 0 0 chr17 5739013 5739045 -89533606 + AT_rich Low_complexity Low_complexity 1 32 0 3 628 193 298 0 0 chr17 5739055 5739112 -89533539 - L2c LINE L2 -221 3166 3110 3 628 279 241 144 77 chr17 5739373 5739541 -89533110 - ORR1E LTR MaLR -192 182 4 3 628 183 262 115 81 chr17 5740634 5740721 -89531930 + L2c LINE L2 3271 3360 -27 3 628 575 315 95 20 chr17 5741001 5741056 -89531595 + ORSL-2b DNA Tip100 7 74 -434 3 628 222 37 0 0 chr17 5741056 5741083 -89531568 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 3 628 575 315 95 20 chr17 5741083 5741331 -89531320 + ORSL-2b DNA Tip100 75 332 -176 3 628 921 196 115 35 chr17 5742087 5742335 -89530316 - MTD LTR MaLR -14 405 151 3 628 303 319 0 21 chr17 5742603 5742699 -89529952 - MIR SINE MIR -80 182 89 3 628 633 257 25 11 chr17 5742955 5743099 -89529552 + ID_B1 SINE B4 80 216 -76 3 628 558 275 156 23 chr17 5743105 5743362 -89529289 + B4A SINE B4 2 292 0 3 628 475 311 69 137 chr17 5743922 5744228 -89528423 + MTE2a LTR MaLR 2 286 -93 3 628 323 244 59 51 chr17 5744494 5744606 -89528045 + MTE2a LTR MaLR 242 374 -5 3 628 679 137 16 0 chr17 5744608 5744732 -89527919 + (TAGA)n Simple_repeat Simple_repeat 1 126 0 3 628 1391 192 162 9 chr17 5746381 5746702 -89525949 - ORR1D2 LTR MaLR 0 370 1 4 628 280 329 0 12 chr17 5747503 5747589 -89525062 + MTE2a LTR MaLR 281 365 -14 4 628 306 0 0 0 chr17 5748048 5748082 -89524569 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 628 547 266 27 27 chr17 5748085 5748232 -89524419 - RSINE1 SINE B4 -16 149 3 4 628 206 75 100 0 chr17 5748438 5748478 -89524173 + A-rich Low_complexity Low_complexity 3 46 0 4 628 234 0 0 0 chr17 5748740 5748766 -89523885 + (A)n Simple_repeat Simple_repeat 1 26 0 4 628 687 264 31 12 chr17 5748949 5749110 -89523541 + RSINE1 SINE B4 2 165 0 4 628 239 364 95 32 chr17 5749110 5749139 -89523512 + B3 SINE B2 1 202 -14 4 628 705 236 0 0 chr17 5749140 5749314 -89523337 + (CA)n Simple_repeat Simple_repeat 1 174 0 4 628 319 41 20 20 chr17 5749586 5749636 -89523015 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 628 357 24 0 0 chr17 5750097 5750139 -89522512 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 628 1021 262 25 50 chr17 5750188 5750469 -89522182 - B4 SINE B4 -17 275 2 4 628 236 261 0 28 chr17 5752244 5752315 -89520336 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 628 481 286 219 11 chr17 5754963 5755246 -89517405 + MER2 DNA MER2_type 1 342 -3 4 628 261 57 0 0 chr17 5756692 5756727 -89515924 + (TCCCC)n Simple_repeat Simple_repeat 4 38 0 4 628 432 250 16 49 chr17 5757013 5757198 -89515453 + (CCCA)n Simple_repeat Simple_repeat 1 179 0 4 628 281 285 128 92 chr17 5757263 5757514 -89515137 - MLT1J LTR MaLR -5 507 248 4 628 267 31 0 0 chr17 5757559 5757591 -89515060 + (CCCCCA)n Simple_repeat Simple_repeat 2 33 0 4 628 228 279 23 92 chr17 5757651 5757738 -89514913 - MLT1J LTR MaLR -507 103 23 4 628 237 301 156 22 chr17 5759652 5759876 -89512775 - ORR1E LTR MaLR -105 254 1 4 628 1101 178 52 5 chr17 5760012 5760204 -89512447 - B3 SINE B2 -2 214 14 4 628 259 347 84 40 chr17 5760179 5760404 -89512247 - MER5C DNA MER1_type -68 245 11 4 628 340 261 342 26 chr17 5760427 5760653 -89511998 + MER77 LTR ERVL 58 355 -252 4 628 353 327 56 0 chr17 5760692 5760799 -89511852 + MER77 LTR ERVL 488 600 -7 4 628 292 307 140 6 chr17 5760713 5760877 -89511774 + MER21B LTR ERV1 476 661 -202 4 628 851 176 191 0 chr17 5760933 5761121 -89511530 + URR1A DNA MER1_type 3 226 0 4 628 369 312 21 0 chr17 5761262 5761358 -89511293 + B4A SINE B4 27 124 -168 4 628 207 0 0 0 chr17 5761697 5761720 -89510931 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 628 500 15 0 43 chr17 5761720 5761789 -89510862 + (GA)n Simple_repeat Simple_repeat 2 68 0 4 628 1547 47 5 20 chr17 5762003 5762199 -89510452 + B2_Mm1t SINE B2 1 193 0 4 628 441 0 0 0 chr17 5762874 5762923 -89509728 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 628 3097 26 0 0 chr17 5762996 5763342 -89509309 + ORR1A0 LTR MaLR 1 346 0 4 628 207 0 0 0 chr17 5764591 5764614 -89508037 + (A)n Simple_repeat Simple_repeat 1 23 0 4 628 1191 74 0 0 chr17 5764968 5765116 -89507535 + B1_Mus1 SINE Alu 1 148 0 4 628 187 261 58 83 chr17 5765745 5765866 -89506785 + L2 LINE L2 2870 2987 -432 4 628 691 230 47 23 chr17 5766162 5766338 -89506313 - B3 SINE B2 -17 178 2 4 628 324 0 0 0 chr17 5766558 5766594 -89506057 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 4 78 6037 151 82 43 chr17 5766996 5768168 -89504483 + RMER12 LTR ERVK 4 1221 -101 4 629 180 0 0 0 chr17 5769174 5769194 -89503457 + (T)n Simple_repeat Simple_repeat 1 20 0 4 629 817 224 75 25 chr17 5769603 5769804 -89502847 + ID_B1 SINE B4 11 221 -3 4 629 2669 64 3 6 chr17 5771538 5771866 -89500785 - ORR1A2 LTR MaLR 0 327 1 4 629 1837 146 27 24 chr17 5771915 5772087 -89500564 + RLTR15 LTR ERVK 1 175 -184 4 629 2667 96 424 59 chr17 5772087 5772514 -89500137 + RMER19A LTR ERVK 1 586 -151 4 629 1308 14 0 0 chr17 5772514 5772660 -89499991 + B1_Mm SINE Alu 2 147 0 4 629 2667 96 424 59 chr17 5772660 5772772 -89499879 + RMER19A LTR ERVK 587 737 0 4 629 1837 146 27 24 chr17 5772772 5772929 -89499722 + RLTR15 LTR ERVK 176 331 -28 4 629 434 304 78 78 chr17 5772946 5773178 -89499473 - MER21B LTR ERV1 -230 633 402 4 629 2473 88 128 8 chr17 5773252 5773619 -89499032 + RLTR10A LTR ERVK 1 411 0 4 629 2104 64 7 26 chr17 5773619 5774028 -89498623 + RLTR10-int LTR ERVK 302 768 -1219 4 629 8498 201 32 31 chr17 5774192 5778638 -89494013 + RLTR10-int LTR ERVK 986 5206 -1336 4 629 2075 85 249 0 chr17 5778638 5778967 -89493684 + RLTR10A LTR ERVK 1 411 0 4 629 839 244 154 18 chr17 5778968 5779240 -89493411 - MER21B LTR ERV1 -541 322 14 4 629 342 0 0 0 chr17 5779722 5779760 -89492891 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 629 433 278 109 26 chr17 5780005 5780208 -89492443 + MIRb SINE MIR 21 240 -36 4 629 532 236 112 30 chr17 5780265 5780462 -89492189 - RLTR15 LTR ERVK -146 213 1 4 629 2744 21 3 60 chr17 5781041 5781388 -89491263 - IAPLTR2b LTR ERVK 0 327 1 4 629 297 51 0 0 chr17 5781504 5781543 -89491108 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 629 527 306 109 63 chr17 5781670 5782036 -89490615 - RLTR12B LTR ERVK -143 385 3 4 629 341 256 89 133 chr17 5782058 5782238 -89490413 - B4A SINE B4 -67 225 54 4 629 207 0 0 0 chr17 5782828 5782851 -89489800 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 629 378 0 0 0 chr17 5782851 5782893 -89489758 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 629 386 240 37 74 chr17 5782905 5783067 -89489584 + RLTR15 LTR ERVK 33 188 -171 4 629 312 48 0 0 chr17 5783084 5783126 -89489525 + (CAGA)n Simple_repeat Simple_repeat 2 43 0 4 629 329 221 73 67 chr17 5783162 5783327 -89489324 + RLTR15 LTR ERVK 179 344 -15 4 629 1853 214 70 10 chr17 5783345 5783732 -89488919 - MTD LTR MaLR 0 419 10 4 629 934 86 47 0 chr17 5783845 5783973 -89488678 - B1_Mus2 SINE Alu -1 146 13 4 629 956 230 123 63 chr17 5784791 5785092 -89487559 + ORR1E LTR MaLR 1 319 -40 4 629 243 263 35 0 chr17 5785071 5785128 -89487523 - PB1 SINE Alu -67 60 2 4 629 279 179 0 18 chr17 5785642 5785699 -89486952 - Lx8 LINE L1 -2 7471 7416 4 629 536 308 0 71 chr17 5786236 5786257 -89486394 - RSINE1 SINE B4 -33 132 112 4 629 2006 150 32 73 chr17 5786257 5786668 -89485983 + ORR1B1 LTR MaLR 1 394 0 4 629 536 308 0 71 chr17 5786668 5786786 -89485865 - RSINE1 SINE B4 -54 111 3 4 629 740 332 9 14 chr17 5786994 5787211 -89485440 - B4A SINE B4 -10 282 67 4 629 3363 138 99 31 chr17 5787341 5787984 -89484667 - RMER6C LTR ERVK -3 687 1 4 629 272 358 100 14 chr17 5788076 5788277 -89484374 + MIRb SINE MIR 19 234 -34 4 629 367 208 226 0 chr17 5788503 5788662 -89483989 + L1MB1 LINE L1 4363 4557 -1583 4 629 4101 22 0 82 chr17 5788660 5789208 -89483443 + L1Md_F2 LINE L1 5084 5586 -297 4 629 8420 36 2 4 chr17 5789208 5790206 -89482445 + L1Md_F2 LINE L1 5587 6582 0 4 629 964 257 91 108 chr17 5790206 5790335 -89482316 + L1MB1 LINE L1 4549 4654 -1489 4 629 351 0 0 0 chr17 5790335 5790374 -89482277 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 629 1237 252 79 76 chr17 5790374 5790460 -89482191 + L1MB1 LINE L1 4655 4766 -1377 4 629 1987 148 82 8 chr17 5790460 5790815 -89481836 - ORR1C2 LTR MaLR -3 381 1 4 629 1237 252 78 73 chr17 5790815 5791106 -89481545 + L1MB1 LINE L1 4764 5051 -1089 4 629 891 256 19 0 chr17 5791106 5791317 -89481334 + B3 SINE B2 2 216 0 4 629 1237 252 78 73 chr17 5791317 5791601 -89481050 + L1MB1 LINE L1 5052 5333 -835 4 629 829 230 56 10 chr17 5791601 5791799 -89480852 + B3 SINE B2 2 208 -8 4 629 444 262 26 114 chr17 5791799 5791958 -89480693 + L1MB1 LINE L1 5334 5471 -697 4 629 420 299 91 10 chr17 5792018 5792217 -89480434 + L1MB1 LINE L1 5587 5801 -367 4 629 414 213 114 8 chr17 5792218 5792341 -89480310 + RMER4A LTR ERVK 1 136 -330 4 629 698 233 102 124 chr17 5792466 5792893 -89479758 + RMER4B LTR ERVK 65 588 -23 4 629 501 240 136 29 chr17 5792912 5793118 -89479533 + L1MB1 LINE L1 5797 6024 -144 4 629 1151 216 124 32 chr17 5793244 5793583 -89479068 - ORR1D2 LTR MaLR 0 370 1 4 629 342 0 0 0 chr17 5794468 5794506 -89478145 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 629 692 197 3 0 chr17 5795330 5795466 -89477185 + B1_Mus1 SINE Alu 5 144 -5 4 629 230 263 50 50 chr17 5796879 5796959 -89475692 - ID4_ SINE ID 0 83 4 4 629 423 0 0 0 chr17 5797093 5797140 -89475511 + (GA)n Simple_repeat Simple_repeat 1 47 0 4 629 1101 215 112 60 chr17 5797419 5797750 -89474901 - MTD LTR MaLR -1 418 71 4 629 507 17 0 0 chr17 5797750 5797810 -89474841 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 629 931 114 15 15 chr17 5797896 5798029 -89474622 + B1_Mm SINE Alu 2 134 -13 4 629 203 0 37 0 chr17 5798029 5798056 -89474595 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 4 629 969 324 79 12 chr17 5799122 5799528 -89473123 + MER63B DNA AcHobo 4 436 0 4 629 210 231 0 0 chr17 5800052 5800091 -89472560 + polypurine Low_complexity Low_complexity 3 41 0 4 629 929 100 12 18 chr17 5800096 5800259 -89472392 + (GGAGA)n Simple_repeat Simple_repeat 4 165 0 4 629 365 146 382 0 chr17 5801309 5801419 -89471232 - RMER5 LTR ERV1 -15 519 368 4 629 828 240 76 13 chr17 5801472 5801708 -89470943 - RMER5 LTR ERV1 -283 251 1 4 629 409 292 47 34 chr17 5802279 5802428 -89470223 - MER34A1 LTR ERV1 -341 246 96 4 629 405 271 14 89 chr17 5804141 5804287 -89468364 + B3A SINE B2 28 162 -36 4 629 357 109 0 0 chr17 5804298 5804353 -89468298 + (CATA)n Simple_repeat Simple_repeat 4 58 0 4 629 250 200 67 0 chr17 5806415 5806490 -89466161 + (CTCA)n Simple_repeat Simple_repeat 1 80 0 4 629 443 117 45 45 chr17 5806752 5806931 -89465720 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 629 402 88 72 36 chr17 5806974 5807140 -89465511 + (CA)n Simple_repeat Simple_repeat 2 173 0 4 629 393 22 0 0 chr17 5808190 5808236 -89464415 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 629 435 331 14 35 chr17 5808332 5808473 -89464178 + RSINE1 SINE B4 28 165 0 4 629 246 160 0 0 chr17 5808488 5808538 -89464113 + (CATA)n Simple_repeat Simple_repeat 1 50 0 4 629 195 42 0 0 chr17 5808877 5808901 -89463750 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 629 396 0 0 0 chr17 5808907 5808951 -89463700 + (GA)n Simple_repeat Simple_repeat 1 44 0 4 629 306 222 41 14 chr17 5808973 5809046 -89463605 - ORR1E LTR MaLR -282 77 3 4 629 2816 131 5 12 chr17 5809508 5809932 -89462719 + MTC LTR MaLR 1 421 0 4 629 216 0 0 0 chr17 5810211 5810235 -89462416 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 4 629 1458 166 32 0 chr17 5810400 5810653 -89461998 + ORR1B1 LTR MaLR 1 261 -133 4 629 1954 178 23 58 chr17 5810664 5811089 -89461562 - L1_Mur3 LINE L1 -24 5856 5478 5 629 226 37 0 0 chr17 5811114 5811141 -89461510 - L1_Mur2 LINE L1 -370 5507 5481 5 629 226 37 0 0 chr17 5811160 5811187 -89461464 - L1_Mur2 LINE L1 -370 5507 5481 5 629 226 37 0 0 chr17 5811206 5811233 -89461418 - L1_Mur2 LINE L1 -370 5507 5481 5 629 230 109 0 132 chr17 5811252 5811305 -89461346 - L1_Mur2 LINE L1 -370 5507 5462 5 629 226 37 0 0 chr17 5811298 5811325 -89461326 - L1_Mur2 LINE L1 -370 5507 5481 5 629 226 37 0 0 chr17 5811390 5811417 -89461234 - L1_Mur2 LINE L1 -370 5507 5481 5 629 275 98 0 0 chr17 5811614 5811655 -89460996 - L1_Mur2 LINE L1 -360 5517 5477 5 629 234 53 0 156 chr17 5811688 5811733 -89460918 - L1_Mur2 LINE L1 -360 5517 5480 5 629 3668 146 179 8 chr17 5811735 5812466 -89460185 - L1_Mur3 LINE L1 -372 5508 4653 5 629 1279 27 0 0 chr17 5812840 5812986 -89459665 + B1_Mus2 SINE Alu 2 147 0 5 629 264 59 0 0 chr17 5812986 5813020 -89459631 + (A)n Simple_repeat Simple_repeat 1 34 0 5 629 449 249 19 146 chr17 5813027 5813147 -89459504 - MER53 DNA hAT -8 185 87 5 629 815 275 9 23 chr17 5813147 5813363 -89459288 + B3 SINE B2 1 213 -3 5 629 449 249 19 146 chr17 5813363 5813454 -89459197 - MER53 DNA hAT -107 86 1 5 629 1344 19 0 0 chr17 5814195 5814354 -89458297 + (TG)n Simple_repeat Simple_repeat 2 160 0 5 629 278 301 153 98 chr17 5814356 5814610 -89458041 + MER34A LTR ERV1 56 323 -248 5 629 278 296 230 0 chr17 5814636 5814771 -89457880 + MER34A LTR ERV1 408 573 -14 5 629 327 383 55 25 chr17 5814817 5815053 -89457598 + L1MEg LINE L1 1728 1970 -4114 5 629 603 74 0 0 chr17 5815354 5815435 -89457216 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 5 629 411 266 61 61 chr17 5815856 5816020 -89456631 - B4A SINE B4 -128 164 1 5 629 1168 262 79 30 chr17 5816703 5817072 -89455579 + MLT2B4 LTR ERVL 4 390 -166 5 629 240 216 34 7 chr17 5818061 5818210 -89454441 + (TG)n Simple_repeat Simple_repeat 1 153 0 5 629 529 134 40 23 chr17 5818244 5818420 -89454231 + (TG)n Simple_repeat Simple_repeat 1 179 0 5 629 1025 151 6 0 chr17 5818471 5818630 -89454021 + RMER6A LTR ERVK 593 752 -4 5 629 476 191 23 17 chr17 5818662 5818838 -89453813 + (TG)n Simple_repeat Simple_repeat 1 177 0 5 629 264 197 6 62 chr17 5818841 5819003 -89453648 + (TATATG)n Simple_repeat Simple_repeat 4 156 0 5 629 310 140 0 20 chr17 5819022 5819073 -89453578 - HAL1-3A_ME LINE L1 -840 2018 1969 5 629 278 333 124 40 chr17 5819532 5819757 -89452894 + MER20B DNA MER1_type 516 759 -24 5 629 280 329 53 33 chr17 5820192 5820343 -89452308 + MIR SINE MIR 31 184 -78 5 629 533 209 18 11 chr17 5821129 5821409 -89451242 + (CA)n Simple_repeat Simple_repeat 1 281 0 5 629 896 235 59 69 chr17 5821411 5821625 -89451026 - MLT2D LTR ERVL -125 289 66 5 629 1294 170 0 43 chr17 5821625 5821859 -89450792 + URR1B DNA MER1_type 2 225 0 5 629 896 235 59 69 chr17 5821859 5821932 -89450719 - MLT2D LTR ERVL -349 65 6 5 629 232 267 10 82 chr17 5822007 5822105 -89450546 - MER72B LTR ERV1 -11 757 667 5 629 339 279 64 46 chr17 5822149 5822258 -89450393 + B4A SINE B4 179 289 -3 5 629 210 37 0 0 chr17 5822288 5822315 -89450336 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 629 186 318 16 0 chr17 5823258 5823321 -89449330 - L2b LINE L2 -1 3374 3311 5 629 519 17 0 0 chr17 5823365 5823425 -89449226 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 629 1094 101 0 0 chr17 5823606 5823754 -89448897 - B1_Mus1 SINE Alu 0 148 1 5 629 1098 68 6 47 chr17 5823771 5823940 -89448711 - L1Md_F2 LINE L1 0 6582 6421 5 629 1264 48 0 0 chr17 5824321 5824468 -89448183 + B1_Mm SINE Alu 1 147 0 5 629 627 168 65 94 chr17 5824985 5824998 -89447653 - B1_Mur1 SINE Alu 0 149 140 5 629 315 0 0 0 chr17 5824998 5825033 -89447618 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 629 627 168 65 94 chr17 5825033 5825157 -89447494 - B1_Mur1 SINE Alu -10 139 16 5 629 564 121 0 0 chr17 5825359 5825450 -89447201 + (CA)n Simple_repeat Simple_repeat 2 92 0 5 629 27 0 0 0 chr17 5825494 5825521 -89447130 + AT_rich Low_complexity Low_complexity 1 27 0 5 629 840 184 0 7 chr17 5825749 5825897 -89446754 + B1_Mur2 SINE Alu 2 148 -1 5 629 426 292 75 25 chr17 5825904 5826104 -89446547 + L1M5 LINE L1 3334 3543 -2603 5 629 249 108 0 0 chr17 5826531 5826568 -89446083 + (GGAGA)n Simple_repeat Simple_repeat 1 37 0 5 629 301 261 78 84 chr17 5826627 5826769 -89445882 + L1MCa LINE L1 1823 1963 -4545 5 629 207 0 0 0 chr17 5826769 5826792 -89445859 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 629 300 217 0 62 chr17 5826794 5826858 -89445793 - PB1D9 SINE Alu -44 76 17 5 629 227 288 0 64 chr17 5826800 5826878 -89445773 - B4A SINE B4 -137 155 83 5 629 249 314 120 56 chr17 5826873 5826998 -89445653 - MLT1F2 LTR MaLR -427 133 1 5 629 3749 80 161 45 chr17 5827520 5828123 -89444528 + L1Md_F2 LINE L1 5909 6581 -1 5 629 216 136 0 43 chr17 5828526 5828572 -89444079 + C-rich Low_complexity Low_complexity 1 44 0 5 629 216 0 0 0 chr17 5829526 5829550 -89443101 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 5 629 285 340 39 0 chr17 5829687 5829790 -89442861 + MER45A DNA Tip100 57 163 -15 5 629 509 283 68 12 chr17 5830508 5830669 -89441982 + Helitron1Nb_Mam RC Helitron 33 202 -914 5 629 861 152 0 0 chr17 5831094 5831219 -89441432 + B1_Mur3 SINE Alu 15 139 -10 5 629 405 242 78 26 chr17 5831489 5831642 -89441009 + RLTR15 LTR ERVK 4 164 -195 5 629 379 324 34 71 chr17 5831638 5831934 -89440717 + RLTR15 LTR ERVK 72 356 -3 5 629 562 331 12 12 chr17 5831945 5832107 -89440544 + MLT1A0 LTR MaLR 204 365 0 5 629 440 207 84 0 chr17 5833136 5833247 -89439404 - ORR1D1 LTR MaLR -2 372 248 5 629 268 188 77 15 chr17 5833256 5833321 -89439330 - ORR1D1 LTR MaLR -301 73 5 5 629 1689 186 71 25 chr17 5833613 5833966 -89438685 - ORR1D1 LTR MaLR 0 374 6 5 629 344 173 115 3 chr17 5833968 5834059 -89438592 - MIR SINE MIR -67 201 97 5 629 442 131 262 0 chr17 5834704 5834788 -89437863 + URR1A DNA MER1_type 3 108 -118 5 629 762 227 72 29 chr17 5835117 5835344 -89437307 - ORR1D1 LTR MaLR -3 364 104 5 629 182 37 37 0 chr17 5835380 5835407 -89437244 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 629 780 192 7 14 chr17 5835430 5835578 -89437073 - ORR1D1 LTR MaLR -194 180 34 5 629 1386 163 106 30 chr17 5835574 5835626 -89437025 + RLTR15 LTR ERVK 17 75 -284 5 629 593 14 14 0 chr17 5835626 5835700 -89436951 + (GA)n Simple_repeat Simple_repeat 2 76 0 5 629 1386 163 106 30 chr17 5835700 5835950 -89436701 + RLTR15 LTR ERVK 76 341 -18 5 629 932 212 0 0 chr17 5835971 5836131 -89436520 - RLTR11A LTR ERVK -317 211 52 5 629 198 0 0 0 chr17 5836131 5836153 -89436498 + (T)n Simple_repeat Simple_repeat 1 22 0 5 629 770 62 0 0 chr17 5836153 5836250 -89436401 - B1_Mus2 SINE Alu 0 147 51 5 629 243 250 14 29 chr17 5836249 5836319 -89436332 - BGLII_B LTR ERVK -372 69 1 5 629 276 221 106 94 chr17 5836470 5836630 -89436021 - L1MA8 LINE L1 -289 6002 5841 5 629 1917 182 65 27 chr17 5836630 5836933 -89435718 - ORR1B1 LTR MaLR -8 386 69 5 629 783 249 96 96 chr17 5836933 5837434 -89435217 + RLTR16 LTR ERVK 5 505 0 5 629 1917 182 65 27 chr17 5837434 5837502 -89435149 - ORR1B1 LTR MaLR -326 68 1 5 629 521 265 45 25 chr17 5837525 5837726 -89434925 - L1MA8 LINE L1 -533 5779 5575 5 629 608 263 53 0 chr17 5838734 5838867 -89433784 + B3 SINE B2 2 141 -75 5 629 28 0 0 0 chr17 5838873 5838901 -89433750 + AT_rich Low_complexity Low_complexity 1 28 0 5 629 541 264 76 7 chr17 5839698 5839843 -89432808 + RSINE1 SINE B4 3 157 -8 5 629 1784 221 19 36 chr17 5839857 5840274 -89432377 - MTD LTR MaLR -7 412 3 5 629 206 246 0 30 chr17 5841186 5841253 -89431398 + G-rich Low_complexity Low_complexity 1 65 0 5 629 24 0 0 0 chr17 5841299 5841323 -89431328 + GC_rich Low_complexity Low_complexity 1 24 0 5 629 21 0 0 0 chr17 5841502 5841523 -89431128 + GC_rich Low_complexity Low_complexity 1 21 0 5 629 589 211 274 12 chr17 5843674 5843842 -89428809 - B3 SINE B2 -3 213 2 5 629 344 251 226 49 chr17 5844600 5844669 -89427982 + B4 SINE B4 2 82 -210 5 629 207 0 0 0 chr17 5844669 5844692 -89427959 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 5 629 344 251 226 49 chr17 5844692 5844865 -89427786 + B4 SINE B4 83 286 -6 5 629 572 279 14 0 chr17 5844937 5845084 -89427567 - B1_Mur2 SINE Alu 0 149 1 5 629 312 333 11 11 chr17 5845346 5845437 -89427214 + PB1D10 SINE Alu 10 100 -17 5 629 289 326 10 48 chr17 5845437 5845449 -89427202 + ID_B1 SINE B4 91 189 -35 5 629 181 315 14 14 chr17 5845574 5845648 -89427003 + L2c LINE L2 3266 3339 -48 5 629 421 332 95 63 chr17 5845931 5846246 -89426405 - L1M5 LINE L1 -3242 2904 2580 5 629 581 318 71 23 chr17 5846252 5846561 -89426090 + Lx9 LINE L1 7149 7472 -172 5 629 266 203 28 0 chr17 5846578 5846721 -89425930 + (TG)n Simple_repeat Simple_repeat 2 148 0 5 629 825 189 13 13 chr17 5847032 5847182 -89425469 + B1_Mur4 SINE Alu 1 150 0 5 629 378 239 17 21 chr17 5847656 5847801 -89424850 - PB1D9 SINE Alu -3 144 1 5 629 2448 169 37 43 chr17 5847871 5848290 -89424361 - RLTR31_Mm LTR ERVK 0 561 137 5 629 315 0 0 0 chr17 5848290 5848325 -89424326 + (CTG)n Simple_repeat Simple_repeat 2 36 0 5 629 1208 85 17 0 chr17 5848325 5848501 -89424150 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 5 629 2448 169 37 43 chr17 5848501 5848593 -89424058 - RLTR31_Mm LTR ERVK -425 136 53 5 629 682 102 18 18 chr17 5848617 5848727 -89423924 + PB1D9 SINE Alu 11 120 0 5 629 757 135 40 0 chr17 5848747 5848873 -89423778 - BGLII_A LTR ERVK -314 131 1 5 629 829 249 84 144 chr17 5850538 5850965 -89421686 - MTE2a LTR MaLR -7 372 1 5 629 433 189 0 12 chr17 5851145 5851311 -89421340 + GA-rich Low_complexity Low_complexity 1 164 0 5 629 279 0 0 0 chr17 5851460 5851491 -89421160 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 629 224 251 0 43 chr17 5851625 5851812 -89420839 + (TG)n Simple_repeat Simple_repeat 1 179 0 5 629 2578 68 14 35 chr17 5852323 5852690 -89419961 + L1Md_F2 LINE L1 6224 6582 0 5 629 320 111 16 0 chr17 5853030 5853093 -89419558 + (TC)n Simple_repeat Simple_repeat 1 64 0 5 629 340 293 0 29 chr17 5853453 5853555 -89419096 + ID_B1 SINE B4 105 203 -21 6 629 908 194 199 6 chr17 5853782 5853958 -89418693 + B3 SINE B2 1 210 -6 6 629 243 277 90 55 chr17 5855002 5855258 -89417393 - L1MC5 LINE L1 -45 7916 7652 6 629 1259 48 0 0 chr17 5855266 5855413 -89417238 + B1_Mm SINE Alu 1 147 0 6 629 2316 102 12 3 chr17 5855545 5855868 -89416783 - ORR1A3 LTR MaLR 0 326 1 6 629 4277 158 94 10 chr17 5856175 5856962 -89415689 - RMER19B LTR ERVK -8 894 42 6 629 684 342 126 23 chr17 5856970 5857446 -89415205 - Tigger13a DNA MER2_type -150 621 97 6 629 229 288 93 27 chr17 5857546 5857621 -89415030 - B1F1 SINE Alu -58 91 12 6 629 839 242 0 0 chr17 5859637 5859794 -89412857 - RSINE1 SINE B4 -4 161 5 6 629 264 277 36 12 chr17 5860229 5860313 -89412338 + RSINE1 SINE B4 59 144 -21 6 629 230 289 137 24 chr17 5860452 5860576 -89412075 + ID_B1 SINE B4 2 139 -85 6 629 7481 75 5 13 chr17 5860836 5862186 -89410465 - L1_Mus3 LINE L1 0 6638 5301 6 629 1020 121 120 6 chr17 5862703 5862878 -89409773 - B2_Mm2 SINE B2 0 195 1 6 629 228 294 95 32 chr17 5862949 5863044 -89409607 + L2b LINE L2 3274 3374 -1 6 629 675 244 52 101 chr17 5863234 5863540 -89409111 + B4A SINE B4 2 292 0 6 629 570 67 0 0 chr17 5863575 5863650 -89409001 + (TA)n Simple_repeat Simple_repeat 1 75 0 6 629 537 329 59 59 chr17 5869279 5869518 -89403133 - RMER5 LTR ERV1 -28 506 268 6 629 278 301 11 21 chr17 5870537 5870632 -89402019 - L1M3 LINE L1 -457 5723 5630 6 629 225 139 0 0 chr17 5870996 5871039 -89401612 + (TAA)n Simple_repeat Simple_repeat 2 44 0 6 629 734 212 20 46 chr17 5871285 5871438 -89401213 - B1_Mur1 SINE Alu 0 149 1 6 629 326 234 42 59 chr17 5871498 5871616 -89401035 - PB1D10 SINE Alu -1 116 1 6 629 611 272 35 30 chr17 5871842 5872043 -89400608 - B4A SINE B4 -8 284 83 6 629 350 330 28 0 chr17 5872258 5872364 -89400287 - B3A SINE B2 -89 109 1 6 629 24 32 0 0 chr17 5872380 5872411 -89400240 + AT_rich Low_complexity Low_complexity 1 31 0 6 629 3543 25 0 0 chr17 5872972 5873368 -89399283 + MTA_Mm LTR MaLR 1 396 0 6 629 219 88 0 0 chr17 5873892 5873926 -89398725 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 629 651 206 0 0 chr17 5874374 5874529 -89398122 + (CA)n Simple_repeat Simple_repeat 2 156 0 6 629 360 324 118 9 chr17 5874984 5875196 -89397455 - MIR SINE MIR -22 240 6 6 629 378 0 0 0 chr17 5875576 5875618 -89397033 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 629 531 267 228 0 chr17 5875693 5875873 -89396778 + ID_B1 SINE B4 4 224 0 6 629 213 39 0 0 chr17 5876004 5876030 -89396621 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 6 629 324 0 0 0 chr17 5876142 5876178 -89396473 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 629 288 0 0 0 chr17 5876178 5876209 -89396442 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 629 1287 242 88 78 chr17 5876301 5876802 -89395849 - Lx8 LINE L1 -4 7469 6964 6 629 502 200 55 91 chr17 5876866 5877031 -89395620 - Lx8 LINE L1 -700 6773 6615 6 629 1168 203 86 26 chr17 5877018 5877321 -89395330 + Lx8 LINE L1 6326 6646 -827 6 629 581 235 0 0 chr17 5877720 5877839 -89394812 - ORR1D1 LTR MaLR -255 119 1 6 629 331 353 97 29 chr17 5878176 5878287 -89394364 + L1MC LINE L1 5409 5525 -2357 6 629 759 101 0 0 chr17 5878287 5878406 -89394245 + (CA)n Simple_repeat Simple_repeat 1 119 0 6 629 331 353 97 29 chr17 5878406 5878469 -89394182 + L1MC LINE L1 5526 5595 -2287 6 629 409 309 8 68 chr17 5878669 5878801 -89393850 - RSINE1 SINE B4 -18 147 24 6 629 331 281 152 86 chr17 5885068 5885278 -89387373 - MLT1A1 LTR MaLR -1 407 141 6 629 486 0 134 0 chr17 5886248 5886382 -89386269 + (CCTG)n Simple_repeat Simple_repeat 4 155 0 6 629 382 192 287 16 chr17 5888919 5889041 -89383610 - B3 SINE B2 -60 156 2 6 629 348 253 77 0 chr17 5889481 5889572 -89383079 + B4 SINE B4 129 226 -66 6 629 540 234 36 60 chr17 5889572 5889740 -89382911 + RSINE1 SINE B4 2 165 0 6 629 477 34 0 0 chr17 5890817 5890876 -89381775 + (CA)n Simple_repeat Simple_repeat 1 59 0 6 629 361 245 61 0 chr17 5891130 5891228 -89381423 + L1MC LINE L1 2555 2658 -3488 6 629 218 196 286 0 chr17 5891278 5891334 -89381317 + ID4_ SINE ID 2 73 -10 6 629 643 229 69 14 chr17 5891461 5891678 -89380973 + L1MC LINE L1 2789 3017 -3129 6 629 211 255 68 6 chr17 5892034 5892196 -89380455 + (GTGTG)n Simple_repeat Simple_repeat 5 176 0 6 629 390 131 298 0 chr17 5892674 5892758 -89379893 + PB1D9 SINE Alu 6 114 -6 6 629 1397 55 44 0 chr17 5893861 5894044 -89378607 + B2_Mm2 SINE B2 3 193 -2 6 629 339 284 102 0 chr17 5894453 5894580 -89378071 - L1MC5 LINE L1 -865 7096 6957 6 629 473 272 123 4 chr17 5894746 5894997 -89377654 - L1MEc LINE L1 -5497 903 623 6 629 216 97 0 0 chr17 5896068 5896099 -89376552 + (TTCTCC)n Simple_repeat Simple_repeat 4 34 0 6 629 213 94 0 0 chr17 5896387 5896419 -89376232 + (GGGGA)n Simple_repeat Simple_repeat 1 32 0 6 629 404 191 110 73 chr17 5896875 5897011 -89375640 - B1F SINE Alu 0 149 9 6 78 400 229 41 77 chr17 5898142 5898336 -89374315 + RLTR15 LTR ERVK 35 221 -138 6 630 402 235 141 47 chr17 5898541 5898733 -89373918 + RLTR15 LTR ERVK 134 343 -16 6 630 521 305 20 0 chr17 5899651 5899802 -89372849 - MER21B LTR ERV1 -299 564 411 6 630 663 243 37 31 chr17 5900236 5900427 -89372224 + B3 SINE B2 6 197 -1 6 630 235 303 0 95 chr17 5900425 5900509 -89372142 + B4 SINE B4 217 292 0 6 630 636 202 9 17 chr17 5900861 5900977 -89371674 + B1_Mur3 SINE Alu 2 116 -33 6 630 396 0 0 0 chr17 5900977 5901021 -89371630 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 630 318 275 70 87 chr17 5901022 5901309 -89371342 - L1MA9 LINE L1 -47 6265 5984 6 630 679 257 155 0 chr17 5901549 5901736 -89370915 - B3 SINE B2 0 216 1 6 630 475 277 156 20 chr17 5901739 5902085 -89370566 - L1MA9 LINE L1 -852 5288 4896 6 630 441 206 0 0 chr17 5902548 5902650 -89370001 + (TG)n Simple_repeat Simple_repeat 1 102 0 6 630 455 156 0 96 chr17 5902834 5903032 -89369619 + (CAG)n Simple_repeat Simple_repeat 1 179 0 6 630 333 283 52 26 chr17 5903069 5903185 -89369466 + ID_B1 SINE B4 98 216 -8 6 630 23 78 0 0 chr17 5903217 5903268 -89369383 + AT_rich Low_complexity Low_complexity 1 51 0 6 630 323 350 8 0 chr17 5906657 5906780 -89365871 + B1F2 SINE Alu 1 124 -25 6 630 389 257 18 45 chr17 5906970 5907080 -89365571 - PB1D10 SINE Alu 0 117 11 6 630 359 211 241 17 chr17 5906976 5907092 -89365559 - ID_B1 SINE B4 -2 222 81 6 630 407 189 122 9 chr17 5907652 5907759 -89364892 - PB1D7 SINE Alu 0 120 2 6 630 279 0 0 0 chr17 5909049 5909080 -89363571 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 630 230 398 21 0 chr17 5909244 5909337 -89363314 + B3A SINE B2 20 114 -84 6 630 219 88 0 0 chr17 5909367 5909401 -89363250 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 630 1418 54 54 0 chr17 5910014 5910198 -89362453 - L1_Mus1 LINE L1 0 6567 6374 6 630 1309 50 71 16 chr17 5910460 5910480 -89362171 - B2_Mm2 SINE B2 -1 194 164 6 630 276 30 0 0 chr17 5910480 5910513 -89362138 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 6 630 1309 50 71 16 chr17 5910513 5910676 -89361975 - B2_Mm2 SINE B2 -32 163 2 6 630 21 57 0 0 chr17 5910678 5910713 -89361938 + AT_rich Low_complexity Low_complexity 1 35 0 6 630 964 64 0 8 chr17 5910713 5910865 -89361786 - B1_Mm SINE Alu 0 148 3 6 630 771 103 0 0 chr17 5910963 5911070 -89361581 - B1_Mm SINE Alu -40 107 1 6 630 291 262 12 113 chr17 5911070 5911146 -89361505 - ORR1B1-int LTR MaLR -862 647 589 6 630 303 258 126 24 chr17 5912754 5912921 -89359730 - L1MD LINE L1 -499 5860 5677 6 630 326 188 143 111 chr17 5912927 5913053 -89359598 - B1F SINE Alu 0 149 20 6 630 473 285 85 30 chr17 5913137 5913550 -89359101 - L1MEg LINE L1 -603 6436 6002 6 630 268 200 76 51 chr17 5913564 5913643 -89359008 - MTEa LTR MaLR -11 368 288 6 630 334 306 67 34 chr17 5914023 5914071 -89358580 - L1MEg LINE L1 -4625 2477 2428 6 630 1012 196 76 0 chr17 5914071 5914255 -89358396 - B3 SINE B2 -18 198 1 6 630 334 306 67 34 chr17 5914255 5914385 -89358266 - L1MEg LINE L1 -4675 2427 2293 6 630 232 320 150 0 chr17 5914510 5914757 -89357894 - L1MEg LINE L1 -5624 1710 1427 6 630 26 0 0 0 chr17 5914801 5914827 -89357824 + AT_rich Low_complexity Low_complexity 1 26 0 6 630 806 150 8 0 chr17 5914848 5914968 -89357683 - B1_Mus2 SINE Alu -8 139 19 6 630 1966 186 146 46 chr17 5915436 5915660 -89356991 + RMER19B LTR ERVK 1 244 -658 6 630 198 0 0 0 chr17 5915660 5915682 -89356969 + (CA)n Simple_repeat Simple_repeat 2 23 0 6 630 1966 186 146 46 chr17 5915682 5915931 -89356720 + RMER19B LTR ERVK 245 520 -382 6 630 268 316 74 0 chr17 5915945 5916040 -89356611 - PB1 SINE Alu -1 126 25 6 630 1366 43 0 0 chr17 5916472 5916636 -89356015 + B2_Mm2 SINE B2 1 164 -31 6 630 831 225 86 30 chr17 5916779 5916976 -89355675 + B3 SINE B2 2 209 -7 6 630 21 0 0 0 chr17 5917028 5917049 -89355602 + AT_rich Low_complexity Low_complexity 1 21 0 6 630 316 236 0 27 chr17 5917106 5917180 -89355471 - HAL1-3A_ME LINE L1 -810 2048 1977 6 630 213 286 97 21 chr17 5917212 5917305 -89355346 - PB1D10 SINE Alu -1 116 17 6 630 735 201 88 98 chr17 5917584 5917799 -89354852 - B3 SINE B2 -2 214 2 6 630 771 290 45 30 chr17 5917830 5918097 -89354554 + B4A SINE B4 2 272 -20 6 630 312 27 0 0 chr17 5918156 5918193 -89354458 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 630 257 204 61 0 chr17 5918764 5918813 -89353838 + B4A SINE B4 15 66 -226 6 630 225 209 136 23 chr17 5918813 5918852 -89353799 + B3A SINE B2 15 112 -86 7 630 294 279 41 50 chr17 5918865 5918992 -89353659 + B4A SINE B4 138 274 -18 7 630 260 27 27 0 chr17 5919009 5919046 -89353605 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 630 291 261 74 57 chr17 5919642 5919764 -89352887 + B4 SINE B4 69 192 -100 6 630 253 264 49 106 chr17 5920839 5920962 -89351689 - PB1D10 SINE Alu -1 116 1 7 630 21 36 0 0 chr17 5921029 5921057 -89351594 + AT_rich Low_complexity Low_complexity 1 28 0 7 630 1422 105 0 22 chr17 5922336 5922560 -89350091 - Lx3_Mus LINE L1 -2 7007 6789 7 630 636 87 0 0 chr17 5922560 5922664 -89349987 - L1_Mur1 LINE L1 -555 5331 5228 7 630 1380 193 206 9 chr17 5924080 5924430 -89348221 - MTD LTR MaLR 0 419 1 7 630 201 39 0 0 chr17 5924924 5924950 -89347701 + (TTG)n Simple_repeat Simple_repeat 3 28 0 7 630 1220 62 0 0 chr17 5924963 5925109 -89347542 - B1_Mus2 SINE Alu 0 147 2 7 630 228 314 0 0 chr17 5925129 5925180 -89347471 + PB1D7 SINE Alu 69 119 -1 7 630 1211 55 7 0 chr17 5925194 5925339 -89347312 + B1_Mus2 SINE Alu 2 147 0 7 630 276 30 0 0 chr17 5925339 5925372 -89347279 + (A)n Simple_repeat Simple_repeat 1 33 0 7 630 207 0 0 0 chr17 5925377 5925400 -89347251 + (TG)n Simple_repeat Simple_repeat 1 23 0 7 630 211 246 13 115 chr17 5925407 5925485 -89347166 + ID4 SINE ID 12 81 -2 7 630 372 178 89 0 chr17 5925747 5925837 -89346814 + Lx3B LINE L1 6750 6847 -126 7 630 485 256 0 17 chr17 5925841 5925960 -89346691 + PB1D9 SINE Alu 1 117 -3 7 630 259 257 228 35 chr17 5926217 5926247 -89346404 + B4A SINE B4 59 178 -114 7 630 554 115 279 0 chr17 5926247 5926351 -89346300 + B1F2 SINE Alu 9 141 -8 7 630 259 257 228 35 chr17 5926351 5926362 -89346289 + B4A SINE B4 179 231 -61 7 630 1018 139 17 34 chr17 5927583 5927762 -89344889 + B2_Mm2 SINE B2 2 177 -18 7 630 831 284 14 0 chr17 5928921 5929129 -89343522 + B3 SINE B2 1 211 -5 7 630 971 230 14 14 chr17 5932540 5932747 -89339904 + B3 SINE B2 1 207 -9 7 630 656 206 64 6 chr17 5932848 5933004 -89339647 - B3A SINE B2 0 198 34 7 630 1954 266 90 48 chr17 5933027 5933512 -89339139 + Charlie12 DNA MER1_type 1843 2350 -523 7 630 889 179 0 7 chr17 5933512 5933658 -89338993 + B1_Mus1 SINE Alu 2 146 -2 7 630 1954 266 90 48 chr17 5933658 5933961 -89338690 + Charlie12 DNA MER1_type 2351 2664 -209 7 630 805 169 0 49 chr17 5933957 5934100 -89338551 - B1_Mus2 SINE Alu -1 146 11 7 630 353 233 34 178 chr17 5933997 5934143 -89338508 - MT2B LTR ERVL -337 264 140 7 630 474 274 54 14 chr17 5934163 5934311 -89338340 - Charlie12 DNA MER1_type -21 2852 2699 7 630 852 175 14 0 chr17 5935542 5935685 -89336966 - B1_Mur3 SINE Alu 0 149 5 7 630 252 0 0 0 chr17 5935789 5935817 -89336834 + (CA)n Simple_repeat Simple_repeat 1 28 0 7 630 315 0 0 0 chr17 5935817 5935851 -89336800 + (GA)n Simple_repeat Simple_repeat 2 36 0 7 630 310 279 126 39 chr17 5936439 5936566 -89336085 + MLT1J LTR MaLR 281 418 -94 7 630 443 245 24 101 chr17 5936530 5936588 -89336063 + MT2B LTR ERVL 110 154 -447 7 630 1123 76 0 0 chr17 5936588 5936733 -89335918 + B1_Mus2 SINE Alu 3 147 0 7 630 351 0 0 0 chr17 5936898 5936937 -89335714 + (TG)n Simple_repeat Simple_repeat 1 39 0 7 630 227 298 43 26 chr17 5938221 5938338 -89334313 + LTR50 LTR ERVL 199 317 -478 7 630 498 241 14 83 chr17 5938457 5938602 -89334049 + MTD LTR MaLR 69 203 -216 7 630 745 207 15 7 chr17 5938606 5938742 -89333909 + B1_Mur3 SINE Alu 1 137 -12 7 630 677 142 21 7 chr17 5938753 5938895 -89333756 + GA-rich Low_complexity Low_complexity 3 146 0 7 630 776 165 193 28 chr17 5938895 5939076 -89333575 + MTD LTR MaLR 197 407 -12 7 630 252 253 0 0 chr17 5939731 5939806 -89332845 + G-rich Low_complexity Low_complexity 1 75 0 7 630 342 191 16 0 chr17 5939966 5940029 -89332622 - B1_Mus1 SINE Alu -83 65 2 7 630 387 0 0 0 chr17 5940611 5940654 -89331997 + (CA)n Simple_repeat Simple_repeat 1 43 0 7 630 1055 107 0 6 chr17 5941176 5941355 -89331296 + (GGA)n Simple_repeat Simple_repeat 1 178 0 7 630 344 277 149 37 chr17 5942195 5942356 -89330295 - MIRb SINE MIR -14 254 76 7 630 228 322 58 50 chr17 5942757 5942878 -89329773 + PB1 SINE Alu 1 122 -5 7 630 21 36 0 0 chr17 5943466 5943494 -89329157 + AT_rich Low_complexity Low_complexity 1 28 0 7 630 3054 63 0 0 chr17 5943710 5944093 -89328558 + L1Md_F2 LINE L1 6199 6581 -1 7 630 210 71 0 0 chr17 5944198 5944226 -89328425 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 7 630 794 277 11 0 chr17 5944245 5944422 -89328229 + B3 SINE B2 38 216 0 7 630 321 216 214 11 chr17 5944426 5944515 -89328136 - PB1D10 SINE Alu 0 117 11 7 630 917 230 34 0 chr17 5944539 5944748 -89327903 - B3 SINE B2 0 216 1 7 630 531 0 0 0 chr17 5944776 5944835 -89327816 + (GGAA)n Simple_repeat Simple_repeat 4 62 0 7 630 473 201 81 76 chr17 5946483 5946615 -89326036 - L1MA7 LINE L1 -1 6290 6162 7 630 180 0 0 0 chr17 5946615 5946635 -89326016 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 7 630 473 201 81 76 chr17 5946635 5946712 -89325939 - L1MA7 LINE L1 -130 6161 6082 7 630 387 326 34 28 chr17 5947125 5947302 -89325349 + MER115 DNA Tip100 516 693 0 7 630 1217 68 0 0 chr17 5947542 5947688 -89324963 + B1_Mus2 SINE Alu 2 147 0 7 630 207 0 0 0 chr17 5947688 5947711 -89324940 + (A)n Simple_repeat Simple_repeat 1 23 0 7 630 239 241 19 0 chr17 5947711 5947765 -89324886 + ORR1C2 LTR MaLR 330 384 0 7 630 750 198 66 33 chr17 5948540 5948736 -89323915 + B3 SINE B2 1 192 -3 7 630 1023 182 0 0 chr17 5949364 5949780 -89322871 + (TG)n Simple_repeat Simple_repeat 1 416 0 7 630 238 240 0 0 chr17 5949780 5949830 -89322821 + RMER12B LTR ERVK 1201 1250 -154 7 630 1515 68 16 0 chr17 5949973 5950164 -89322487 - B2_Mm2 SINE B2 0 195 2 7 630 1101 234 137 52 chr17 5951352 5951681 -89320970 - ORR1D2 LTR MaLR -13 357 1 7 630 426 82 0 0 chr17 5951750 5951781 -89320870 + (A)n Simple_repeat Simple_repeat 1 31 0 7 630 1229 61 0 0 chr17 5951781 5951928 -89320723 + B1_Mus2 SINE Alu 1 147 0 7 630 426 82 0 0 chr17 5951928 5951957 -89320694 + (A)n Simple_repeat Simple_repeat 1 29 0 7 630 737 264 29 6 chr17 5952111 5952286 -89320365 + B4A SINE B4 106 284 -8 7 630 450 0 0 0 chr17 5952342 5952392 -89320259 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 630 407 359 43 23 chr17 5952614 5952870 -89319781 + LTR87 LTR ERVL? 286 546 -78 7 630 244 155 40 168 chr17 5952870 5952971 -89319680 - MLT1A1 LTR MaLR -1 407 320 7 630 255 61 0 0 chr17 5953019 5953052 -89319599 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 630 294 165 0 0 chr17 5953052 5953131 -89319520 + GA-rich Low_complexity Low_complexity 2 80 0 7 630 5953 63 75 7 chr17 5953705 5955238 -89317413 + L1VL2 LINE L1 170 1826 -1789 7 630 340 264 0 42 chr17 5955376 5955471 -89317180 - PB1D10 SINE Alu 0 117 27 7 630 21 57 0 0 chr17 5956100 5956135 -89316516 + AT_rich Low_complexity Low_complexity 1 35 0 7 630 25 0 0 0 chr17 5956176 5956201 -89316450 + AT_rich Low_complexity Low_complexity 1 25 0 7 630 240 342 34 17 chr17 5957847 5957966 -89314685 + L2a LINE L2 372 492 -2927 7 630 216 279 46 92 chr17 5960860 5961034 -89311617 + L2a LINE L2 1436 1601 -1818 7 630 227 333 15 0 chr17 5961922 5961988 -89310663 + L2a LINE L2 3102 3168 -258 7 630 3542 45 28 9 chr17 5962895 5963323 -89309328 - RLTR10C LTR ERVK 0 436 1 7 630 277 307 146 58 chr17 5963649 5963957 -89308694 - RMER17C LTR ERVK -62 348 14 7 630 504 48 0 0 chr17 5964192 5964255 -89308396 + (TG)n Simple_repeat Simple_repeat 1 63 0 7 630 638 61 0 20 chr17 5964255 5964355 -89308296 + (CAGAGA)n Simple_repeat Simple_repeat 3 101 0 7 630 390 271 222 25 chr17 5964703 5964987 -89307664 + MLT1C LTR MaLR 113 452 -15 7 630 258 152 0 0 chr17 5966476 5966535 -89306116 + (CTG)n Simple_repeat Simple_repeat 1 59 0 7 630 859 210 100 93 chr17 5966873 5967057 -89305594 - RLTR42-int LTR ERVK -4056 1466 1258 7 630 1432 65 5 16 chr17 5967057 5967245 -89305406 - B2_Mm2 SINE B2 -8 187 2 7 630 859 210 100 93 chr17 5967245 5967381 -89305270 - RLTR42-int LTR ERVK -4265 1257 1144 7 630 2927 48 4 153 chr17 5967857 5968327 -89304324 - MTB LTR MaLR 0 400 1 7 630 2034 125 42 44 chr17 5968478 5968838 -89303813 - ORR1B2 LTR MaLR -8 359 1 7 630 352 263 75 89 chr17 5969203 5969349 -89303302 - Charlie4z DNA MER1_type -3 164 21 7 630 235 383 51 19 chr17 5969492 5969649 -89303002 - MER82 DNA MER2_type -7 646 485 7 630 203 103 26 0 chr17 5969762 5969801 -89302850 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 630 664 221 15 0 chr17 5969811 5969947 -89302704 - B3 SINE B2 -75 141 4 7 630 626 218 81 13 chr17 5969965 5970114 -89302537 - RSINE1 SINE B4 -4 161 3 7 630 426 39 0 0 chr17 5970925 5970977 -89301674 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 630 513 284 0 0 chr17 5970977 5971086 -89301565 - RSINE1 SINE B4 -48 117 9 7 630 2499 47 0 6 chr17 5971236 5971555 -89301096 + L1Md_F3 LINE L1 5270 5586 -297 7 630 8286 39 1 1 chr17 5971555 5972539 -89300112 + L1Md_F3 LINE L1 5587 6570 -14 7 630 211 255 0 0 chr17 5973336 5973387 -89299264 + C-rich Low_complexity Low_complexity 1 51 0 7 630 198 0 0 0 chr17 5973752 5973774 -89298877 + (T)n Simple_repeat Simple_repeat 1 22 0 7 630 691 279 6 6 chr17 5973902 5974061 -89298590 + RSINE1 SINE B4 3 161 -4 7 630 369 0 0 0 chr17 5974136 5974177 -89298474 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 630 245 227 0 0 chr17 5974178 5974222 -89298429 - ID4 SINE ID -11 72 29 7 630 605 161 34 43 chr17 5974251 5974368 -89298283 + B3 SINE B2 2 117 -99 8 630 240 111 0 0 chr17 5974386 5974422 -89298229 + (TA)n Simple_repeat Simple_repeat 1 36 0 8 630 457 263 58 58 chr17 5974525 5974751 -89297900 - L1MB8 LINE L1 0 6178 5953 8 630 344 25 0 0 chr17 5974888 5974928 -89297723 + B1_Mm SINE Alu 81 120 -27 8 630 460 31 30 30 chr17 5975025 5975092 -89297559 + B1_Mm SINE Alu 81 147 0 8 630 302 0 26 0 chr17 5975093 5975131 -89297520 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 8 630 272 363 65 0 chr17 5978922 5979046 -89293605 - MER63B DNA AcHobo 0 436 305 8 630 316 266 75 106 chr17 5979899 5980059 -89292592 + Charlie2b DNA MER1_type 178 332 -2450 8 630 472 259 102 51 chr17 5980068 5980324 -89292327 + Charlie2b DNA MER1_type 1796 2064 -718 8 630 722 269 28 0 chr17 5980325 5980470 -89292181 + B3A SINE B2 1 149 -49 8 630 270 0 0 0 chr17 5980472 5980502 -89292149 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 630 2445 51 3 0 chr17 5981141 5981437 -89291214 + L1_Mus1 LINE L1 6268 6564 -3 8 630 180 0 0 0 chr17 5981453 5981473 -89291178 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 8 630 3101 113 106 30 chr17 5982275 5982777 -89289874 - Lx LINE L1 -3 6651 6112 8 630 1293 41 0 0 chr17 5984672 5984819 -89287832 + B1_Mus2 SINE Alu 1 147 0 8 630 188 176 29 0 chr17 5985318 5985352 -89287299 - MER5A DNA MER1_type -24 165 131 8 630 2603 96 93 3 chr17 5985470 5985857 -89286794 + Lx3_Mus LINE L1 6569 6990 -19 8 630 225 0 0 0 chr17 5985858 5985883 -89286768 + (TTAA)n Simple_repeat Simple_repeat 2 26 0 8 630 313 120 20 0 chr17 5986665 5986715 -89285936 + HAL1-3A_ME LINE L1 1978 2028 -830 8 630 228 218 0 0 chr17 5986715 5986770 -89285881 + (CA)n Simple_repeat Simple_repeat 2 56 0 8 630 366 65 0 0 chr17 5986771 5986817 -89285834 + HAL1-3A_ME LINE L1 1976 2021 -837 8 630 255 281 33 33 chr17 5987037 5987129 -89285522 - MER5A1 DNA MER1_type -36 130 39 8 630 277 297 95 48 chr17 5988506 5988657 -89283994 + MIR SINE MIR 47 196 -66 8 630 817 168 51 0 chr17 5988959 5989096 -89283555 - B1_Mur4 SINE Alu -6 144 1 8 630 512 255 156 19 chr17 5989147 5989307 -89283344 - B3A SINE B2 -16 182 1 8 630 1028 256 94 28 chr17 5989507 5989912 -89282739 - RMER15 LTR ERVL 0 575 48 8 630 186 43 0 0 chr17 5990427 5990450 -89282201 + (T)n Simple_repeat Simple_repeat 1 23 0 8 630 7200 5 0 0 chr17 5990454 5991234 -89281417 - L1Md_T LINE L1 0 6582 5803 8 630 658 283 75 16 chr17 5991434 5991621 -89281030 - B4A SINE B4 -93 199 2 8 630 551 287 84 55 chr17 5992917 5993252 -89279399 - MLT1C LTR MaLR 0 467 42 8 630 291 259 124 41 chr17 5993568 5993689 -89278962 - MLT1A0 LTR MaLR -1 364 234 8 630 245 98 24 0 chr17 5994410 5994451 -89278200 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 630 324 64 0 0 chr17 5997123 5997170 -89275481 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 630 591 15 0 0 chr17 5997170 5997237 -89275414 + (GA)n Simple_repeat Simple_repeat 2 69 0 8 630 386 274 97 3 chr17 5998183 5998295 -89274356 - PB1D7 SINE Alu -29 120 1 8 630 240 222 32 0 chr17 5999566 5999629 -89273022 - Lx6 LINE L1 -2 7458 7394 8 630 450 0 0 0 chr17 6002102 6002152 -89270499 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 630 275 266 82 82 chr17 6003639 6003774 -89268877 - LTR79 LTR ERVL -33 494 360 2 630 316 331 46 52 chr17 6004079 6004273 -89268378 - L1ME4a LINE L1 -3 6121 5929 3 630 633 252 0 0 chr17 6004394 6004517 -89268134 + ID_B1 SINE B4 84 206 -18 4 630 1219 35 14 14 chr17 6004754 6004901 -89267750 - B1_Mur4 SINE Alu 0 150 4 5 630 340 0 0 77 chr17 6005442 6005507 -89267144 + (CGGGG)n Simple_repeat Simple_repeat 5 64 0 6 630 1731 21 0 0 chr17 6006858 6007051 -89265600 - B2_Mm1a SINE B2 0 193 1 7 630 239 72 68 45 chr17 6007064 6007108 -89265543 - Charlie10b DNA MER1_type -152 90 46 8 630 752 223 97 48 chr17 6008383 6008590 -89264061 + ID_B1 SINE B4 4 220 -4 9 630 685 287 121 0 chr17 6008925 6009190 -89263461 - MER82 DNA MER2_type -156 497 201 1 630 206 128 0 25 chr17 6010558 6010598 -89262053 + G-rich Low_complexity Low_complexity 1 39 0 1 630 606 236 25 33 chr17 6011111 6011275 -89261376 - ID_B1 SINE B4 -51 241 81 1 630 7394 46 4 6 chr17 6011280 6012228 -89260423 - L1Md_F2 LINE L1 0 6582 5637 1 630 29 0 0 0 chr17 6012407 6012436 -89260215 + AT_rich Low_complexity Low_complexity 1 29 0 1 630 687 220 130 5 chr17 6012617 6012809 -89259842 - B3 SINE B2 0 216 1 1 630 243 0 0 0 chr17 6013003 6013030 -89259621 + (TCCA)n Simple_repeat Simple_repeat 3 29 0 1 630 291 177 0 0 chr17 6013030 6013092 -89259559 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 630 360 48 48 0 chr17 6014291 6014354 -89258297 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 630 837 7 66 13 chr17 6014366 6014518 -89258133 + (TG)n Simple_repeat Simple_repeat 2 161 0 1 630 2112 137 9 15 chr17 6014930 6015257 -89257394 - ORR1A3 LTR MaLR -1 325 1 1 630 264 30 0 0 chr17 6016490 6016523 -89256128 + (ACTG)n Simple_repeat Simple_repeat 4 36 0 2 630 601 282 78 0 chr17 6016804 6016946 -89255705 - RSINE1 SINE B4 0 165 13 2 630 228 67 0 0 chr17 6016968 6016998 -89255653 + (TAGA)n Simple_repeat Simple_repeat 1 30 0 2 630 430 241 42 17 chr17 6017103 6017221 -89255430 + B1F SINE Alu 29 149 0 2 630 223 278 0 0 chr17 6017228 6017282 -89255369 + ID4 SINE ID 29 82 -1 2 630 294 29 0 0 chr17 6018530 6018565 -89254086 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 630 405 0 0 0 chr17 6019814 6019859 -89252792 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 630 1458 169 57 184 chr17 6020554 6020990 -89251661 - ORR1C2 LTR MaLR -3 381 1 2 630 250 370 54 0 chr17 6021145 6021237 -89251414 + MIRb SINE MIR 14 110 -158 2 630 396 0 0 0 chr17 6021250 6021294 -89251357 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 630 558 0 0 0 chr17 6021294 6021355 -89251296 + (GA)n Simple_repeat Simple_repeat 1 62 0 3 630 1388 100 16 0 chr17 6024121 6024311 -89248340 - B2_Mm2 SINE B2 -1 194 2 3 630 261 0 0 0 chr17 6024564 6024593 -89248058 + (T)n Simple_repeat Simple_repeat 1 29 0 3 630 359 69 0 33 chr17 6025168 6025228 -89247423 + (CAGAGA)n Simple_repeat Simple_repeat 3 60 0 3 630 474 179 0 0 chr17 6026915 6027010 -89245641 + (CA)n Simple_repeat Simple_repeat 1 95 0 3 630 2091 145 118 0 chr17 6027715 6028080 -89244571 - MTD LTR MaLR -7 412 5 3 630 339 312 165 0 chr17 6028163 6028333 -89244318 - MTEa LTR MaLR -162 217 20 3 631 234 0 0 0 chr17 6030387 6030413 -89242238 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 631 1154 21 6 88 chr17 6030413 6030572 -89242079 - B1_Mus1 SINE Alu -2 146 1 3 631 288 270 0 26 chr17 6030799 6030875 -89241776 + PB1D10 SINE Alu 40 113 -4 3 631 24 42 0 20 chr17 6030877 6030895 -89241756 + AT_rich Low_complexity Low_complexity 1 18 0 4 631 1202 107 39 0 chr17 6030895 6031073 -89241578 + B2_Mm2 SINE B2 1 185 -10 4 631 24 42 0 20 chr17 6031073 6031103 -89241548 + AT_rich Low_complexity Low_complexity 1 30 0 4 631 3056 52 60 0 chr17 6031222 6031606 -89241045 - MTB_Mm LTR MaLR 0 407 1 4 631 323 314 54 125 chr17 6031886 6032199 -89240452 + B4A SINE B4 2 292 0 4 631 218 235 20 0 chr17 6032442 6032493 -89240158 - ID4 SINE ID -1 82 31 4 631 313 286 93 41 chr17 6033996 6034193 -89238458 - L1MDa LINE L1 -5277 1356 1168 4 631 440 295 29 0 chr17 6034283 6034388 -89238263 + RSINE1 SINE B4 37 144 -21 4 631 381 302 92 20 chr17 6034717 6034914 -89237737 + L1MB5 LINE L1 5755 5965 -209 4 631 226 270 130 0 chr17 6034947 6035062 -89237589 + L1MB5 LINE L1 6049 6178 -6 4 631 615 260 121 23 chr17 6035937 6036201 -89236450 + B4A SINE B4 1 290 -2 4 631 414 0 0 0 chr17 6036260 6036306 -89236345 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 631 539 289 81 6 chr17 6038762 6038922 -89233729 + MER2B DNA MER2_type 163 334 -2 5 631 24 0 0 0 chr17 6039351 6039375 -89233276 + AT_rich Low_complexity Low_complexity 1 24 0 5 631 817 181 168 6 chr17 6039906 6040067 -89232584 + B3 SINE B2 1 187 -29 5 631 746 165 60 0 chr17 6040563 6040696 -89231955 + B1_Mur2 SINE Alu 1 141 -8 5 631 472 252 52 0 chr17 6041409 6041524 -89231127 + RSINE1 SINE B4 4 124 -41 5 631 201 121 0 0 chr17 6041524 6041557 -89231094 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 631 340 226 149 12 chr17 6043047 6043208 -89229443 + L1MB7 LINE L1 5924 6106 -78 5 631 219 275 0 0 chr17 6043234 6043274 -89229377 + ID4 SINE ID 38 77 -6 5 631 423 98 0 0 chr17 6043290 6043351 -89229300 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 631 717 229 71 66 chr17 6045923 6046134 -89226517 + MT2A LTR ERVL 2 213 -320 6 631 318 133 37 85 chr17 6046164 6046268 -89226383 + MT2A LTR ERVL 483 584 0 6 631 293 233 74 53 chr17 6046270 6046365 -89226286 + B4A SINE B4 48 144 -148 6 631 528 266 119 65 chr17 6047256 6047441 -89225210 + B3A SINE B2 3 197 -1 6 631 294 245 108 0 chr17 6047769 6047871 -89224780 + L1M2 LINE L1 2406 2518 -4331 6 631 508 302 128 0 chr17 6048097 6048332 -89224319 + L1M2 LINE L1 3025 3289 -3556 6 631 512 170 104 0 chr17 6054661 6054767 -89217884 - B1_Mus2 SINE Alu 0 147 31 6 631 213 278 0 0 chr17 6055055 6055109 -89217542 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 631 390 296 56 70 chr17 6055390 6055604 -89217047 + RMER5 LTR ERV1 181 391 -143 6 631 560 134 10 0 chr17 6057119 6057216 -89215435 + (TCC)n Simple_repeat Simple_repeat 3 100 0 6 631 1270 34 0 0 chr17 6057218 6057364 -89215287 - B1_Mus2 SINE Alu 0 147 2 6 631 21 0 0 0 chr17 6057431 6057452 -89215199 + AT_rich Low_complexity Low_complexity 1 21 0 6 631 219 259 129 47 chr17 6057711 6057796 -89214855 + MIRb SINE MIR 34 125 -143 7 631 23 0 0 0 chr17 6058114 6058137 -89214514 + AT_rich Low_complexity Low_complexity 1 23 0 7 631 348 297 137 7 chr17 6058180 6058319 -89214332 - RSINE1 SINE B4 -6 159 3 7 631 1291 34 0 0 chr17 6058598 6058744 -89213907 - B1_Mm SINE Alu 0 147 2 7 631 359 252 0 80 chr17 6058844 6058956 -89213695 + ID_B1 SINE B4 91 193 -31 7 631 588 226 88 22 chr17 6059174 6059310 -89213341 + B3 SINE B2 1 145 -71 7 631 259 244 47 35 chr17 6059326 6059411 -89213240 + MT2B LTR ERVL 195 280 -321 7 631 344 228 86 11 chr17 6059337 6059430 -89213221 + B1_Mur1 SINE Alu 49 148 -1 7 631 207 220 0 0 chr17 6059522 6059572 -89213079 + (TA)n Simple_repeat Simple_repeat 1 50 0 7 631 1116 240 123 0 chr17 6059572 6059872 -89212779 + ORR1D2 LTR MaLR 1 337 -33 7 631 286 152 182 17 chr17 6059874 6059982 -89212669 - B3A SINE B2 -6 210 80 8 631 22 0 0 0 chr17 6060700 6060722 -89211929 + AT_rich Low_complexity Low_complexity 1 22 0 8 631 480 35 0 0 chr17 6060783 6060841 -89211810 + (TAAA)n Simple_repeat Simple_repeat 3 60 0 8 631 935 202 9 49 chr17 6061101 6061325 -89211326 + B3 SINE B2 2 216 0 8 631 238 215 49 37 chr17 6061423 6061505 -89211146 - Lx8 LINE L1 -31 7442 7360 8 631 1237 48 0 0 chr17 6061895 6062042 -89210609 - B1_Mus2 SINE Alu 0 147 1 8 631 327 104 0 0 chr17 6062245 6062293 -89210358 + (TAGTG)n Simple_repeat Simple_repeat 3 50 0 8 631 409 256 23 0 chr17 6062299 6062385 -89210266 + B4A SINE B4 24 111 -181 8 631 690 124 5 7 chr17 6062358 6062483 -89210168 + B3 SINE B2 9 132 -66 8 631 1432 89 21 0 chr17 6062545 6062735 -89209916 + B2_Mm2 SINE B2 2 195 0 8 631 342 0 0 0 chr17 6062763 6062801 -89209850 + (CA)n Simple_repeat Simple_repeat 2 39 0 9 631 298 217 17 0 chr17 6064612 6064672 -89207979 - ID2 SINE ID -11 72 12 9 631 910 208 61 75 chr17 6065325 6065538 -89207113 + B3 SINE B2 1 210 -6 9 631 978 71 11 1 chr17 6065793 6065940 -89206711 + B2_Mm2 SINE B2 1 159 -57 9 631 539 298 67 14 chr17 6065988 6066196 -89206455 + MER20 DNA MER1_type 1 219 0 9 631 596 228 77 72 chr17 6066216 6066410 -89206241 + B3A SINE B2 3 197 -1 9 631 1186 68 0 0 chr17 6066897 6067045 -89205606 - B1_Mus1 SINE Alu 0 148 1 9 631 503 96 12 0 chr17 6067295 6067378 -89205273 + (TG)n Simple_repeat Simple_repeat 2 85 0 9 631 953 259 20 27 chr17 6067704 6067993 -89204658 - B4A SINE B4 -3 289 1 9 631 459 202 12 0 chr17 6068381 6068465 -89204186 + PB1D9 SINE Alu 35 119 -1 9 631 708 156 41 1 chr17 6068689 6068816 -89203835 - B1_Mus2 SINE Alu 0 147 17 1 631 186 43 0 0 chr17 6069031 6069054 -89203597 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 631 1152 51 0 0 chr17 6069054 6069191 -89203460 - B1_Mus1 SINE Alu -11 137 1 1 631 1936 149 50 52 chr17 6070249 6070632 -89202019 + ORR1C2 LTR MaLR 1 382 -2 1 631 1042 98 7 0 chr17 6071118 6071261 -89201390 + B1_Mus1 SINE Alu 1 144 -4 1 631 240 59 0 0 chr17 6071268 6071302 -89201349 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 631 458 378 126 10 chr17 6071387 6071689 -89200962 - L1ME3B LINE L1 -221 6019 5683 1 631 312 172 0 0 chr17 6072290 6072348 -89200303 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 631 216 184 0 0 chr17 6072952 6073001 -89199650 + (CGTG)n Simple_repeat Simple_repeat 3 51 0 1 631 711 241 107 40 chr17 6073050 6073275 -89199376 - B4A SINE B4 -51 241 2 1 631 415 218 84 70 chr17 6073289 6073432 -89199219 - B1_Mur1 SINE Alu 0 149 5 1 631 207 207 200 33 chr17 6073852 6073942 -89198709 + L2b LINE L2 3265 3369 -6 1 631 665 187 9 0 chr17 6074782 6074889 -89197762 - B1_Mur2 SINE Alu -9 140 33 1 631 261 188 0 148 chr17 6074821 6074902 -89197749 - RLTR25A LTR ERVK -531 572 504 1 631 802 275 81 13 chr17 6075126 6075336 -89197315 + B4A SINE B4 7 232 -60 1 631 453 308 52 15 chr17 6075336 6075471 -89197180 + RSINE1 SINE B4 2 141 -24 1 631 317 164 0 18 chr17 6075595 6075651 -89197000 + HAL1-3A_ME LINE L1 1975 2029 -829 1 631 645 176 0 0 chr17 6075652 6075794 -89196857 + (CA)n Simple_repeat Simple_repeat 2 143 0 1 631 285 325 154 1 chr17 6075952 6076202 -89196449 - L1MC LINE L1 -3279 2867 2570 1 631 446 161 40 0 chr17 6076305 6076394 -89196257 + B1_Mur1 SINE Alu 18 110 -39 1 631 262 194 39 77 chr17 6076327 6076405 -89196246 + MT2B LTR ERVL 199 273 -328 1 631 1515 43 5 16 chr17 6076447 6076636 -89196015 - B2_Mm1a SINE B2 -6 187 1 1 631 669 127 0 38 chr17 6076788 6076894 -89195757 - B2_Mm2 SINE B2 -92 103 2 1 631 207 0 0 0 chr17 6076910 6076933 -89195718 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 631 1268 27 0 7 chr17 6076941 6077090 -89195561 - B1_Mus1 SINE Alu 0 148 1 1 631 219 286 57 0 chr17 6077348 6077418 -89195233 + L2b LINE L2 3287 3360 -15 1 631 366 179 264 33 chr17 6077624 6077745 -89194906 - B1_Mur4 SINE Alu 0 150 2 1 631 661 275 104 50 chr17 6078003 6078405 -89194246 + L1MA7 LINE L1 5606 6029 -271 1 631 381 286 113 26 chr17 6078819 6078970 -89193681 + RSINE1 SINE B4 1 164 -1 1 631 189 107 0 0 chr17 6078977 6079005 -89193646 + (CATA)n Simple_repeat Simple_repeat 4 31 0 1 631 183 129 0 0 chr17 6079584 6079615 -89193036 + (TCCG)n Simple_repeat Simple_repeat 2 32 0 1 631 184 200 198 74 chr17 6080316 6080397 -89192254 - L3 LINE CR1 -1610 2879 2789 1 631 423 230 8 89 chr17 6080433 6080557 -89192094 - PB1D9 SINE Alu -1 119 6 1 631 354 227 17 164 chr17 6081297 6081413 -89191238 + B1_Mur1 SINE Alu 51 149 0 1 631 401 188 69 50 chr17 6081781 6081882 -89190769 - MER33 DNA MER1_type 0 324 222 1 631 633 236 67 7 chr17 6081888 6082037 -89190614 - B3A SINE B2 -33 165 8 1 631 243 0 0 0 chr17 6082166 6082193 -89190458 + (TTTTG)n Simple_repeat Simple_repeat 5 31 0 1 631 198 0 0 0 chr17 6082422 6082444 -89190207 + (GGA)n Simple_repeat Simple_repeat 3 24 0 1 631 2556 155 479 6 chr17 6082525 6082755 -89189896 + RMER6A LTR ERVK 1 316 -440 1 631 203 0 0 36 chr17 6082755 6082783 -89189868 + (TGGGGG)n Simple_repeat Simple_repeat 2 28 0 1 631 2556 160 179 7 chr17 6082783 6083137 -89189514 + RMER6A LTR ERVK 317 756 0 1 631 242 258 236 24 chr17 6083298 6083425 -89189226 - Tigger7 DNA MER2_type -1902 589 436 1 631 293 70 47 0 chr17 6083762 6083805 -89188846 - B1_Mus1 SINE Alu -99 49 5 1 631 215 248 63 90 chr17 6084243 6084354 -89188297 - L3 LINE CR1 -4318 171 64 1 631 613 260 68 0 chr17 6084896 6085042 -89187609 + RSINE1 SINE B4 5 160 -5 1 631 759 154 69 0 chr17 6085648 6085778 -89186873 + B1_Mur1 SINE Alu 5 143 -6 1 631 688 175 67 0 chr17 6085820 6085940 -89186711 + B1_Mus2 SINE Alu 18 145 -2 1 631 378 42 0 0 chr17 6086872 6086920 -89185731 + (TCCC)n Simple_repeat Simple_repeat 3 50 0 1 631 1407 75 21 0 chr17 6086935 6087122 -89185529 + B2_Mm1a SINE B2 2 192 -1 1 631 499 245 0 0 chr17 6087127 6087225 -89185426 - B1_Mm SINE Alu -48 99 2 1 631 583 60 11 35 chr17 6087245 6087332 -89185319 - B2_Mm1t SINE B2 -8 185 101 1 631 219 250 117 0 chr17 6087820 6087880 -89184771 - ID SINE ID -150 74 8 1 631 492 217 71 55 chr17 6087910 6088037 -89184614 + B1_Mur2 SINE Alu 18 146 -3 1 631 256 247 13 0 chr17 6088096 6088173 -89184478 - L1MA5 LINE L1 -4 6296 6219 1 631 390 275 109 9 chr17 6088729 6088839 -89183812 - RSINE1 SINE B4 -40 125 5 1 631 515 188 87 48 chr17 6089411 6089532 -89183119 - B3 SINE B2 -70 125 1 1 631 405 257 52 10 chr17 6089582 6089702 -89182949 - B1F1 SINE Alu -7 142 9 1 631 1291 95 0 36 chr17 6090072 6090268 -89182383 + L1_Mus2 LINE L1 6378 6566 0 1 631 290 221 15 0 chr17 6090293 6090361 -89182290 - ID_B1 SINE B4 -52 172 104 1 631 803 272 11 21 chr17 6091691 6091879 -89180772 + B3 SINE B2 1 186 -30 1 631 1209 68 0 0 chr17 6092054 6092201 -89180450 - B1_Mus2 SINE Alu 0 147 1 1 631 445 337 75 20 chr17 6092697 6092897 -89179754 - B4A SINE B4 -79 213 3 1 631 259 314 65 91 chr17 6092998 6093051 -89179600 - B3A SINE B2 -16 182 2 1 631 413 351 8 38 chr17 6093051 6093184 -89179467 - B4A SINE B4 -162 130 2 1 631 540 30 0 0 chr17 6093208 6093274 -89179377 + (TTGG)n Simple_repeat Simple_repeat 1 66 0 1 631 519 167 65 0 chr17 6093492 6093600 -89179051 + PB1D9 SINE Alu 5 119 -1 1 631 297 241 0 0 chr17 6093635 6093693 -89178958 + ZP3AR Satellite Satellite 28 85 -127 1 631 465 267 18 141 chr17 6093650 6093753 -89178898 + ID SINE ID 1 82 -142 1 631 314 272 151 28 chr17 6093753 6093859 -89178792 + PB1 SINE Alu 1 119 -8 1 631 207 0 0 0 chr17 6093881 6093904 -89178747 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 631 342 326 48 42 chr17 6093909 6093944 -89178707 - L1ME4a LINE L1 -209 5915 5882 1 631 243 0 0 0 chr17 6093944 6093971 -89178680 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 631 342 326 48 42 chr17 6093971 6094011 -89178640 - L1ME4a LINE L1 -243 5881 5838 1 631 192 40 0 0 chr17 6094011 6094036 -89178615 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 631 342 326 48 42 chr17 6094036 6094148 -89178503 - L1ME4a LINE L1 -287 5837 5728 1 631 549 267 57 57 chr17 6094196 6094371 -89178280 + B3A SINE B2 24 198 0 1 631 751 138 289 0 chr17 6095149 6095308 -89177343 + B3 SINE B2 1 205 -11 1 631 734 253 87 5 chr17 6095332 6095527 -89177124 + B3 SINE B2 2 212 -4 1 631 241 304 0 0 chr17 6095550 6095606 -89177045 + ID4 SINE ID 3 58 -25 1 631 278 156 0 15 chr17 6095820 6095885 -89176766 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 631 358 196 21 0 chr17 6095980 6096077 -89176574 + (TA)n Simple_repeat Simple_repeat 1 99 0 1 631 492 48 0 0 chr17 6096339 6096402 -89176249 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 631 649 158 190 38 chr17 6096466 6096624 -89176027 - B3A SINE B2 -16 182 1 1 631 399 300 35 28 chr17 6097092 6097236 -89175415 - B1F SINE Alu -3 146 2 1 631 663 239 25 59 chr17 6097502 6097683 -89174968 - ID_B1 SINE B4 -39 253 81 1 631 2711 205 11 67 chr17 6098258 6098881 -89173770 + RMER19C LTR ERVK 2 589 -22 1 631 736 175 33 0 chr17 6098884 6099004 -89173647 - B1_Mur2 SINE Alu -16 133 10 1 631 1189 62 7 0 chr17 6099141 6099287 -89173364 + B1_Mm SINE Alu 1 147 0 1 631 3281 56 2 2 chr17 6099709 6100105 -89172546 - MTA_Mm LTR MaLR 0 396 1 1 631 9078 40 5 11 chr17 6100105 6100163 -89172488 - MTA_Mm-int LTR MaLR 0 1098 1051 1 631 1590 47 11 0 chr17 6100163 6100354 -89172297 - B2_Mm1t SINE B2 0 193 1 1 631 9078 40 5 11 chr17 6100354 6101400 -89171251 - MTA_Mm-int LTR MaLR -48 1050 1 1 631 3363 43 2 2 chr17 6101400 6101796 -89170855 - MTA_Mm LTR MaLR 0 396 1 1 631 1140 52 0 0 chr17 6101873 6102007 -89170644 + B1_Mm SINE Alu 5 138 -9 1 631 321 0 61 0 chr17 6102007 6102056 -89170595 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 1 631 902 223 24 9 chr17 6102214 6102427 -89170224 - B3 SINE B2 0 216 1 1 631 1201 222 101 99 chr17 6102460 6102780 -89169871 + ORR1D2 LTR MaLR 5 326 -44 1 631 1230 48 7 0 chr17 6102780 6102927 -89169724 - B1_Mus1 SINE Alu 0 148 1 1 631 1201 222 101 99 chr17 6102927 6102971 -89169680 + ORR1D2 LTR MaLR 327 370 0 1 631 252 77 0 0 chr17 6103144 6103183 -89169468 + (T)n Simple_repeat Simple_repeat 1 39 0 1 631 368 306 27 0 chr17 6103508 6103619 -89169032 + PB1D10 SINE Alu 2 115 -2 1 631 646 39 69 0 chr17 6104266 6104368 -89168283 - L1Md_F3 LINE L1 0 6584 6476 1 631 199 348 62 62 chr17 6104512 6104754 -89167897 - L3 LINE CR1 -482 4007 3766 1 631 475 132 105 42 chr17 6105772 6105867 -89166784 + B1F2 SINE Alu 49 149 0 1 631 363 228 167 10 chr17 6105972 6106074 -89166577 + PB1D7 SINE Alu 2 119 -1 1 631 224 213 0 0 chr17 6106657 6106718 -89165933 + C-rich Low_complexity Low_complexity 6 66 0 1 631 219 125 0 0 chr17 6106892 6106932 -89165719 + (CGG)n Simple_repeat Simple_repeat 2 41 0 1 631 222 255 20 20 chr17 6106993 6107093 -89165558 + (CGGGG)n Simple_repeat Simple_repeat 5 104 0 2 631 562 185 123 0 chr17 6107905 6108035 -89164616 - B1_Mur1 SINE Alu -2 147 2 2 631 186 43 0 0 chr17 6108177 6108200 -89164451 + (TTTTTG)n Simple_repeat Simple_repeat 1 23 0 2 631 585 303 47 11 chr17 6108961 6109151 -89163500 - B3A SINE B2 0 198 2 2 631 1159 82 0 0 chr17 6109200 6109347 -89163304 - B1_Mus1 SINE Alu -1 147 1 2 631 542 290 65 5 chr17 6110008 6110209 -89162442 - L1MB2 LINE L1 -147 6024 5812 2 631 23 0 0 0 chr17 6110252 6110275 -89162376 + AT_rich Low_complexity Low_complexity 1 23 0 2 631 225 250 0 0 chr17 6110386 6110434 -89162217 + (TTG)n Simple_repeat Simple_repeat 1 48 0 2 631 513 206 37 18 chr17 6110725 6110834 -89161817 + RSINE1 SINE B4 12 122 -43 2 631 217 216 0 0 chr17 6110895 6110932 -89161719 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 631 956 98 9 209 chr17 6111063 6111283 -89161368 - B2_Mm1t SINE B2 -14 179 4 2 631 237 139 0 0 chr17 6111298 6111341 -89161310 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2 631 418 234 77 42 chr17 6111342 6111485 -89161166 - B1F1 SINE Alu -1 148 1 2 631 1141 99 70 0 chr17 6111784 6111956 -89160695 - B2_Mm1t SINE B2 -8 185 2 2 631 760 153 34 14 chr17 6112722 6112868 -89159783 + B1_Mur1 SINE Alu 1 149 0 2 631 304 252 56 46 chr17 6113302 6113410 -89159241 + PB1D10 SINE Alu 9 117 0 2 631 216 182 208 0 chr17 6114556 6114633 -89158018 - B1F2 SINE Alu -2 118 26 2 631 230 0 0 32 chr17 6114970 6115001 -89157650 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2 631 1228 14 0 0 chr17 6115005 6115143 -89157508 - B1_Mus2 SINE Alu -8 139 2 2 631 570 192 133 23 chr17 6115927 6116055 -89156596 + B1_Mur1 SINE Alu 3 144 -5 2 631 1121 224 0 14 chr17 6116124 6116337 -89156314 - B3 SINE B2 -4 212 3 2 631 607 186 26 0 chr17 6116659 6116772 -89155879 + B1_Mur3 SINE Alu 28 143 -6 2 631 1339 172 139 61 chr17 6116868 6116959 -89155692 + MTC LTR MaLR 2 82 -339 2 631 1309 151 27 0 chr17 6116959 6117178 -89155473 + URR1B DNA MER1_type 1 225 0 2 631 1339 172 139 61 chr17 6117178 6117445 -89155206 + MTC LTR MaLR 83 388 -33 2 631 570 182 25 106 chr17 6117853 6118013 -89154638 - B1_Mur2 SINE Alu -1 148 2 2 631 257 286 0 61 chr17 6118530 6118612 -89154039 + ID4 SINE ID 5 81 -2 2 631 645 269 38 90 chr17 6119447 6119659 -89152992 - B4 SINE B4 -10 282 82 2 631 484 215 96 7 chr17 6119678 6119814 -89152837 - B1F2 SINE Alu -1 148 1 2 631 1140 273 41 48 chr17 6120449 6120842 -89151809 - MMAR1 DNA Mariner -222 1064 675 2 631 1584 59 32 0 chr17 6120845 6121065 -89151586 - ORR1A2 LTR MaLR -8 319 93 2 631 252 0 0 0 chr17 6121065 6121093 -89151558 + (T)n Simple_repeat Simple_repeat 1 28 0 2 631 265 368 0 0 chr17 6121990 6122142 -89150509 + C-rich Low_complexity Low_complexity 6 157 0 2 631 759 86 43 0 chr17 6122224 6122340 -89150311 - ORR1A2 LTR MaLR -206 121 1 2 631 778 230 181 8 chr17 6122340 6122567 -89150084 - MMAR1 DNA Mariner -607 679 412 2 631 750 207 7 28 chr17 6122569 6122713 -89149938 - B1_Mur2 SINE Alu -4 145 5 2 631 471 177 167 9 chr17 6122716 6122830 -89149821 - MMAR1 DNA Mariner -946 340 209 2 631 412 319 15 15 chr17 6122830 6122967 -89149684 + RSINE1 SINE B4 1 137 -28 2 631 795 96 16 16 chr17 6123011 6123138 -89149513 + B1_Mur2 SINE Alu 23 149 0 2 631 781 189 64 28 chr17 6123133 6123351 -89149300 - MMAR1 DNA Mariner -1060 226 1 2 631 517 259 44 0 chr17 6123523 6123658 -89148993 + B1F SINE Alu 1 141 -8 2 631 508 211 195 17 chr17 6123665 6123839 -89148812 + B3 SINE B2 1 205 -11 2 631 27 49 0 0 chr17 6124432 6124473 -89148178 + AT_rich Low_complexity Low_complexity 1 41 0 2 631 582 245 27 27 chr17 6124973 6125120 -89147531 - B1_Mur2 SINE Alu -1 148 2 2 631 210 278 139 0 chr17 6125320 6125392 -89147259 - ID4 SINE ID 0 83 2 2 631 369 237 34 34 chr17 6125815 6125933 -89146718 - MER21B LTR ERV1 -596 267 150 2 631 530 116 40 40 chr17 6126318 6126417 -89146234 - BC1_Mm scRNA scRNA -53 99 1 2 631 233 254 18 0 chr17 6126377 6126432 -89146219 - ZP3AR Satellite Satellite -130 82 27 2 631 884 82 115 0 chr17 6126714 6126836 -89145815 - B1_Mus2 SINE Alu -9 138 3 2 631 1586 181 127 40 chr17 6126861 6127307 -89145344 - BGLII_B LTR ERVK -10 431 1 2 631 623 250 132 11 chr17 6127456 6127646 -89145005 - B3 SINE B2 -2 214 2 2 631 1730 156 70 133 chr17 6127906 6128364 -89144287 - RLTR23 LTR ERV1 0 430 2 2 631 456 221 47 19 chr17 6128740 6128846 -89143805 - PB1D10 SINE Alu -7 110 2 2 631 237 228 75 12 chr17 6128934 6129014 -89143637 - L1MB4 LINE L1 -15 6165 6081 2 631 485 207 113 45 chr17 6129084 6129261 -89143390 - L1MB4 LINE L1 -241 5939 5751 2 631 268 245 59 69 chr17 6129961 6130062 -89142589 - MLT1A1 LTR MaLR 0 408 309 2 631 891 224 88 5 chr17 6130206 6130399 -89142252 - B3 SINE B2 -6 210 2 2 631 265 302 115 8 chr17 6131292 6131422 -89141229 + MIRb SINE MIR 7 150 -118 2 631 249 57 0 0 chr17 6131655 6131690 -89140961 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2 631 636 289 21 10 chr17 6133257 6133449 -89139202 - B3 SINE B2 -20 196 3 2 631 1129 189 211 14 chr17 6134580 6134930 -89137721 + RMER10A LTR ERVL 3 421 -21 2 631 762 114 75 15 chr17 6135299 6135433 -89137218 - B1_Mur4 SINE Alu -7 143 2 2 631 482 167 0 0 chr17 6135658 6135736 -89136915 + MTC LTR MaLR 3 80 -341 2 631 805 139 6 138 chr17 6135742 6135901 -89136750 + B1_Mur4 SINE Alu 5 142 -8 2 631 1374 155 192 3 chr17 6136021 6136339 -89136312 + MTC LTR MaLR 44 421 0 2 631 730 225 17 23 chr17 6136513 6136690 -89135961 + URR1B DNA MER1_type 50 225 0 2 631 255 204 0 0 chr17 6137131 6137185 -89135466 + (CATA)n Simple_repeat Simple_repeat 2 55 0 2 631 1224 34 7 0 chr17 6139986 6140133 -89132518 + B1_Mus1 SINE Alu 1 148 0 2 631 322 256 97 32 chr17 6140186 6140279 -89132372 - MLT1A0 LTR MaLR 0 365 267 2 631 394 287 132 13 chr17 6140328 6140487 -89132164 - MLT1A0 LTR MaLR -187 178 1 2 631 607 246 11 23 chr17 6140587 6140762 -89131889 - MLT1A1 LTR MaLR -2 406 234 2 631 947 234 145 47 chr17 6140836 6141195 -89131456 - L1ME3 LINE L1 -253 5909 5516 2 631 502 111 44 0 chr17 6141575 6141665 -89130986 + ORR1B1 LTR MaLR 1 94 -313 2 631 234 159 45 0 chr17 6141653 6141697 -89130954 + MT2B2 LTR ERVL 411 456 -128 2 631 833 158 20 0 chr17 6141749 6141895 -89130756 + ORR1B1 LTR MaLR 198 346 -48 2 631 1033 146 40 12 chr17 6141908 6142081 -89130570 + MERVL_2A-int LTR ERVL 1216 1393 -4368 2 631 289 71 24 0 chr17 6142121 6142163 -89130488 - MERVL-int LTR ERVL -2339 3146 3104 2 631 338 206 123 0 chr17 6142461 6142534 -89130117 - B1_Mur3 SINE Alu -5 144 63 2 631 180 0 0 0 chr17 6142534 6142554 -89130097 + (T)n Simple_repeat Simple_repeat 1 20 0 2 631 1649 27 11 0 chr17 6142609 6142796 -89129855 - B2_Mm1t SINE B2 -4 189 1 2 631 279 0 0 0 chr17 6143155 6143186 -89129465 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 631 257 331 81 23 chr17 6143469 6143642 -89129009 - MIR SINE MIR -31 231 49 2 631 563 265 103 51 chr17 6144177 6144352 -89128299 - B4 SINE B4 0 292 109 2 631 203 271 21 0 chr17 6144363 6144411 -89128240 + CT-rich Low_complexity Low_complexity 4 52 0 2 631 294 73 0 0 chr17 6145691 6145732 -89126919 + (TCCC)n Simple_repeat Simple_repeat 4 44 0 2 631 736 161 0 0 chr17 6145733 6145863 -89126788 - B1_Mur4 SINE Alu -14 136 7 2 631 466 241 34 102 chr17 6145863 6145909 -89126742 - B4 SINE B4 -80 212 49 2 631 580 258 305 10 chr17 6145959 6146250 -89126401 - MTD LTR MaLR -31 388 12 2 631 368 234 97 28 chr17 6146563 6146708 -89125943 + L1MA4 LINE L1 5750 5904 -396 2 631 29 0 0 0 chr17 6146973 6147002 -89125649 + AT_rich Low_complexity Low_complexity 1 29 0 2 631 388 259 54 36 chr17 6147101 6147213 -89125438 + PB1D10 SINE Alu 1 114 -3 2 631 466 227 0 0 chr17 6147418 6147506 -89125145 + 5S rRNA rRNA 1 88 -33 2 631 618 221 8 16 chr17 6148233 6148357 -89124294 + B1_Mm SINE Alu 2 124 -23 2 631 210 250 144 52 chr17 6148999 6149096 -89123555 + PB1D10 SINE Alu 2 107 -10 2 631 1193 34 0 45 chr17 6149841 6149995 -89122656 - B1_Mm SINE Alu 0 147 1 2 631 888 140 0 27 chr17 6149995 6150141 -89122510 - B1_Mur4 SINE Alu -7 143 1 2 631 887 172 57 17 chr17 6151282 6151459 -89121192 + ORR1C2 LTR MaLR 198 381 -3 2 631 401 283 39 8 chr17 6151674 6151802 -89120849 - ID_B1 SINE B4 -2 222 91 2 631 317 216 58 83 chr17 6152545 6152666 -89119985 + B3A SINE B2 1 118 -80 2 631 563 196 34 22 chr17 6153682 6153828 -89118823 - MTC LTR MaLR -21 400 226 2 631 385 152 76 0 chr17 6153863 6153942 -89118709 - MTC LTR MaLR -309 85 1 2 631 765 142 102 0 chr17 6154891 6155018 -89117633 + B1_Mus1 SINE Alu 1 140 -8 2 631 280 235 12 29 chr17 6156385 6156465 -89116186 + L1M2 LINE L1 3776 3870 -2273 2 631 25 65 0 0 chr17 6156555 6156601 -89116050 + AT_rich Low_complexity Low_complexity 1 46 0 2 631 227 77 0 0 chr17 6157405 6157444 -89115207 - B1_Mur4 SINE Alu 0 150 112 2 631 1459 215 155 34 chr17 6157448 6157925 -89114726 - RMER15 LTR ERVL -14 561 27 2 631 1237 48 0 0 chr17 6158400 6158546 -89114105 - B1_Mm SINE Alu 0 147 2 2 631 186 43 0 0 chr17 6158616 6158639 -89114012 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 631 536 259 42 21 chr17 6158751 6158893 -89113758 - ID_B1 SINE B4 0 224 80 2 631 307 286 210 0 chr17 6159023 6159142 -89113509 - RSINE1 SINE B4 -18 147 4 2 631 356 284 39 129 chr17 6159199 6159377 -89113274 - RSINE1 SINE B4 -1 164 3 3 631 891 213 61 5 chr17 6159679 6159877 -89112774 - B3 SINE B2 -6 210 2 3 631 1402 62 23 0 chr17 6160099 6160276 -89112375 + B2_Mm2 SINE B2 1 181 -14 3 632 223 229 0 0 chr17 6161475 6161523 -89111128 - B3A SINE B2 -142 56 9 3 632 198 0 0 0 chr17 6162779 6162801 -89109850 + (T)n Simple_repeat Simple_repeat 1 22 0 3 632 550 254 0 9 chr17 6163370 6163485 -89109166 + PB1D10 SINE Alu 1 114 -3 3 632 1030 115 6 0 chr17 6163801 6163957 -89108694 - B2_Mm1t SINE B2 0 193 37 3 632 405 123 0 0 chr17 6163958 6164023 -89108628 + (TG)n Simple_repeat Simple_repeat 1 65 0 3 632 476 206 130 14 chr17 6164142 6164280 -89108371 - RSINE1 SINE B4 0 165 12 3 632 1115 185 0 89 chr17 6164312 6164549 -89108102 - B3 SINE B2 0 216 1 3 632 207 0 0 0 chr17 6165037 6165060 -89107591 + (A)n Simple_repeat Simple_repeat 1 23 0 3 632 213 130 65 0 chr17 6165398 6165444 -89107207 + T-rich Low_complexity Low_complexity 1 49 0 3 632 1168 105 17 0 chr17 6165716 6165897 -89106754 + B2_Mm2 SINE B2 1 184 -11 3 632 180 0 0 0 chr17 6165935 6165955 -89106696 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 3 632 558 270 126 0 chr17 6166119 6166278 -89106373 + B3 SINE B2 3 181 -35 3 632 1318 101 32 0 chr17 6166312 6166501 -89106150 - B2_Mm2 SINE B2 0 195 1 3 632 197 273 183 21 chr17 6167066 6167208 -89105443 + MIRc SINE MIR 46 210 -58 3 632 197 274 26 64 chr17 6167726 6167804 -89104847 + MIR SINE MIR 149 223 -39 3 632 609 14 0 0 chr17 6168240 6168310 -89104341 + (TC)n Simple_repeat Simple_repeat 1 70 0 3 632 983 207 28 42 chr17 6168614 6168831 -89103820 + B3 SINE B2 1 214 -2 3 632 352 186 144 56 chr17 6168858 6168983 -89103668 - MLT1A1 LTR MaLR -8 400 265 3 632 4179 2 0 0 chr17 6170467 6170919 -89101732 + L1Md_A LINE L1 6131 6582 0 3 632 209 164 0 47 chr17 6170927 6170991 -89101660 + A-rich Low_complexity Low_complexity 1 61 0 3 632 632 295 82 23 chr17 6171061 6171366 -89101285 - Lx7 LINE L1 -1782 5914 5592 3 632 21 36 0 0 chr17 6171473 6171501 -89101150 + AT_rich Low_complexity Low_complexity 1 28 0 3 632 540 274 42 73 chr17 6171515 6171680 -89100971 - RSINE1 SINE B4 -2 163 4 3 632 1470 259 86 19 chr17 6171778 6172360 -89100291 - L1M2 LINE L1 -976 5167 4547 3 632 210 288 17 0 chr17 6173456 6173515 -89099136 + RSINE1 SINE B4 26 85 -80 3 632 544 110 132 0 chr17 6173468 6173559 -89099092 + B2_Mm2 SINE B2 38 140 -55 3 632 411 21 0 0 chr17 6173567 6173615 -89099036 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 632 186 43 0 0 chr17 6174401 6174424 -89098227 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 3 632 1225 71 0 0 chr17 6174425 6174579 -89098072 - B2_Mm2 SINE B2 -41 154 1 3 632 261 0 0 0 chr17 6174876 6174905 -89097746 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 632 21 36 0 0 chr17 6175673 6175701 -89096950 + AT_rich Low_complexity Low_complexity 1 28 0 3 632 473 279 62 35 chr17 6175721 6175866 -89096785 - RSINE1 SINE B4 -15 150 2 3 632 1678 162 125 37 chr17 6175969 6176322 -89096329 - ORR1C2 LTR MaLR 0 384 1 3 632 370 156 12 61 chr17 6177119 6177201 -89095450 + ORR1C1 LTR MaLR 74 151 -227 3 632 1175 61 0 7 chr17 6177204 6177352 -89095299 + B1_Mm SINE Alu 1 147 0 3 632 943 179 81 40 chr17 6177376 6177574 -89095077 - ORR1C2 LTR MaLR -178 206 1 3 632 890 245 64 15 chr17 6177692 6177895 -89094756 + B3 SINE B2 1 213 -3 3 632 2785 32 14 9 chr17 6179951 6180296 -89092355 + L1Md_F2 LINE L1 6236 6582 0 3 632 234 0 0 0 chr17 6180847 6180873 -89091778 + (CAGG)n Simple_repeat Simple_repeat 1 26 0 3 632 234 0 0 0 chr17 6180898 6180924 -89091727 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 632 260 222 0 65 chr17 6180987 6181064 -89091587 - PB1D10 SINE Alu -2 115 44 3 632 770 219 42 15 chr17 6181191 6181481 -89091170 + L1M2 LINE L1 5184 5485 -815 3 632 711 111 21 40 chr17 6181521 6181655 -89090996 + MTB_Mm LTR MaLR 61 204 -217 3 632 1262 342 41 12 chr17 6181645 6182137 -89090514 - RCHARR1 DNA MER1_type -466 508 3 3 632 34 0 0 0 chr17 6182144 6182178 -89090473 + AT_rich Low_complexity Low_complexity 1 34 0 3 632 296 312 16 16 chr17 6182259 6182386 -89090265 + (CAGAGA)n Simple_repeat Simple_repeat 2 128 0 3 632 1287 120 11 0 chr17 6182417 6182608 -89090043 - B2_Mm1t SINE B2 0 193 1 3 632 342 115 0 0 chr17 6182662 6182714 -89089937 + (TCC)n Simple_repeat Simple_repeat 1 52 0 3 632 361 280 58 50 chr17 6183158 6183297 -89089354 + L1MEe LINE L1 760 899 -3955 3 632 313 299 124 57 chr17 6183317 6183494 -89089157 + B4 SINE B4 2 190 -102 3 632 543 150 155 70 chr17 6183604 6183733 -89088918 + B1_Mus1 SINE Alu 4 143 -5 3 632 239 95 0 45 chr17 6183733 6183777 -89088874 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 3 632 371 251 124 59 chr17 6183821 6184007 -89088644 + B3A SINE B2 1 198 0 3 632 293 350 101 18 chr17 6184411 6184629 -89088022 + MIRb SINE MIR 3 238 -30 3 632 218 346 12 25 chr17 6185397 6185477 -89087174 + ID SINE ID 5 83 -141 3 632 1253 20 7 0 chr17 6185593 6185739 -89086912 - B1_Mus1 SINE Alu 0 148 2 3 632 206 252 113 40 chr17 6186789 6186913 -89085738 + MIRc SINE MIR 112 244 -24 3 632 181 231 69 99 chr17 6187666 6187767 -89084884 - L3 LINE CR1 -2265 2224 2127 3 632 1072 75 0 81 chr17 6187828 6187988 -89084663 + B1_Mur4 SINE Alu 4 150 0 3 632 243 0 0 0 chr17 6189017 6189044 -89083607 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 632 1016 212 26 0 chr17 6189049 6189238 -89083413 - B3 SINE B2 -21 195 2 3 632 1059 277 113 34 chr17 6189360 6189767 -89082884 - RMER5 LTR ERV1 -53 481 43 3 632 207 189 52 39 chr17 6189782 6189859 -89082792 + T-rich Low_complexity Low_complexity 2 79 0 3 632 294 229 117 78 chr17 6191497 6191625 -89081026 - B1_Mur4 SINE Alu 0 150 18 3 632 1338 233 117 6 chr17 6192335 6192676 -89079975 + RLTR30 LTR ERV1 1 379 0 3 632 3476 20 8 0 chr17 6192814 6193207 -89079444 + MTA_Mm LTR MaLR 1 396 0 3 632 619 302 89 42 chr17 6193670 6194110 -89078541 - MER67B LTR ERV1 -5 656 1 3 632 399 41 0 0 chr17 6194468 6194517 -89078134 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 632 180 0 0 0 chr17 6194517 6194537 -89078114 + (CA)n Simple_repeat Simple_repeat 1 20 0 3 632 255 302 22 13 chr17 6194696 6194775 -89077876 - PB1 SINE Alu -59 90 6 3 632 2463 159 38 5 chr17 6195932 6196329 -89076322 - MTC LTR MaLR -11 410 1 3 632 183 42 0 0 chr17 6196364 6196388 -89076263 + (CAA)n Simple_repeat Simple_repeat 2 25 0 3 632 374 279 139 6 chr17 6197793 6197959 -89074692 - MLT1B LTR MaLR -16 374 187 3 632 1041 252 104 0 chr17 6198269 6198547 -89074104 + MTE2b LTR MaLR 73 379 0 3 632 991 207 24 15 chr17 6200402 6200608 -89072043 - B3 SINE B2 -6 210 3 3 632 486 0 0 0 chr17 6201070 6201124 -89071527 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 632 387 56 0 0 chr17 6201131 6201185 -89071466 + (GA)n Simple_repeat Simple_repeat 1 54 0 3 632 186 43 0 0 chr17 6201188 6201211 -89071440 + (ACCG)n Simple_repeat Simple_repeat 2 24 0 3 632 1406 199 150 15 chr17 6201289 6201616 -89071035 + ORR1D1 LTR MaLR 1 371 -3 3 632 680 303 32 29 chr17 6203259 6203538 -89069113 - B4 SINE B4 -10 282 3 3 632 227 215 0 71 chr17 6203655 6203725 -89068926 - RMER12 LTR ERVK -508 814 750 3 632 549 195 324 59 chr17 6203879 6204198 -89068453 - MTE2a LTR MaLR -15 404 1 3 632 379 61 0 0 chr17 6205437 6205486 -89067165 + B1_Mur4 SINE Alu 93 141 -9 3 632 207 0 0 0 chr17 6205486 6205509 -89067142 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 632 370 281 21 10 chr17 6206533 6206630 -89066021 - PB1D10 SINE Alu -19 98 1 3 632 364 254 116 37 chr17 6207632 6207837 -89064814 - L1MB3 LINE L1 -522 5922 5718 3 632 1292 102 43 0 chr17 6207837 6208023 -89064628 + B2_Mm2 SINE B2 1 194 -1 3 632 318 266 81 153 chr17 6208023 6208034 -89064617 - L1MB3 LINE L1 -449 5725 5723 3 632 398 292 15 15 chr17 6208034 6208166 -89064485 - B1_Mur1 SINE Alu -17 132 1 3 632 546 264 96 62 chr17 6208166 6208491 -89064160 - L1MB3 LINE L1 -452 5722 5389 3 632 982 111 28 7 chr17 6208589 6208734 -89063917 + B1_Mus1 SINE Alu 1 148 0 3 632 1179 133 0 0 chr17 6209211 6209490 -89063161 + (TG)n Simple_repeat Simple_repeat 1 279 0 3 632 773 165 220 21 chr17 6209883 6210069 -89062582 - URR1A DNA MER1_type -3 223 1 3 632 278 358 25 59 chr17 6210641 6210843 -89061808 - MLT1A LTR MaLR -178 196 2 3 632 250 312 132 8 chr17 6211523 6211652 -89060999 + MIRb SINE MIR 63 207 -61 3 632 220 283 0 0 chr17 6212191 6212237 -89060414 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 632 203 326 122 15 chr17 6213973 6214104 -89058547 - MIRb SINE MIR -108 160 16 3 632 180 97 0 0 chr17 6216368 6216399 -89056252 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 632 1194 48 7 0 chr17 6216406 6216551 -89056100 - B1_Mus2 SINE Alu 0 147 2 3 632 384 275 353 7 chr17 6217058 6217208 -89055443 + ID_B1 SINE B4 1 202 -22 4 632 1078 95 0 20 chr17 6217322 6217473 -89055178 - B1_Mus1 SINE Alu 0 148 1 4 632 1492 67 10 10 chr17 6217478 6217673 -89054978 - B2_Mm2 SINE B2 0 195 1 4 632 22 0 0 0 chr17 6217862 6217884 -89054767 + AT_rich Low_complexity Low_complexity 1 22 0 4 632 189 0 0 0 chr17 6217966 6217987 -89054664 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 4 632 239 237 34 0 chr17 6219862 6219921 -89052730 + MER57D LTR ERV1 312 372 -39 4 632 216 0 0 0 chr17 6220014 6220038 -89052613 + (CCTG)n Simple_repeat Simple_repeat 2 25 0 4 632 237 224 20 0 chr17 6220470 6220519 -89052132 - L1MA10 LINE L1 -115 6219 6170 4 632 777 297 90 53 chr17 6220592 6221171 -89051480 - L1ME3 LINE L1 -259 5903 5304 4 632 354 361 148 32 chr17 6221237 6221426 -89051225 - L1ME3 LINE L1 -1019 5127 4917 4 632 288 253 21 0 chr17 6223252 6223330 -89049321 - PB1D10 SINE Alu -59 90 4 4 632 819 236 34 19 chr17 6223471 6223678 -89048973 - ID_B1 SINE B4 -13 211 2 4 632 864 220 88 10 chr17 6223700 6223893 -89048758 - B3 SINE B2 -5 211 4 4 632 285 249 79 97 chr17 6224906 6225133 -89047518 - RMER17C LTR ERVK -59 351 129 4 632 21 0 0 0 chr17 6226415 6226436 -89046215 + AT_rich Low_complexity Low_complexity 1 21 0 4 632 23 33 0 0 chr17 6226458 6226488 -89046163 + AT_rich Low_complexity Low_complexity 1 30 0 4 632 1254 41 0 7 chr17 6226697 6226845 -89045806 + B1_Mus2 SINE Alu 1 147 0 4 632 300 253 37 25 chr17 6226849 6226930 -89045721 + L1MEg LINE L1 1882 1963 -4121 4 632 203 245 19 0 chr17 6227784 6227837 -89044814 + C-rich Low_complexity Low_complexity 6 59 0 4 632 225 205 49 0 chr17 6228192 6228314 -89044337 + GA-rich Low_complexity Low_complexity 1 128 0 4 632 227 250 336 9 chr17 6228738 6228851 -89043800 + RSINE1 SINE B4 3 152 -13 4 632 675 176 80 1 chr17 6229728 6229871 -89042780 - MTD LTR MaLR -14 405 240 4 632 1005 106 0 0 chr17 6230451 6230631 -89042020 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 632 204 40 0 0 chr17 6232022 6232047 -89040604 + (CCA)n Simple_repeat Simple_repeat 3 27 0 4 632 1961 157 90 27 chr17 6234797 6235165 -89037486 - ORR1B1 LTR MaLR -2 392 2 4 632 206 214 54 0 chr17 6235420 6235476 -89037175 - L2a LINE L2 -1 3425 3367 4 632 241 250 64 21 chr17 6236018 6236112 -89036539 - L1MC5 LINE L1 -562 7399 7302 4 632 195 129 0 0 chr17 6237785 6237816 -89034835 + (TCC)n Simple_repeat Simple_repeat 3 33 0 4 632 182 61 60 20 chr17 6238604 6238654 -89033997 + (TTTTG)n Simple_repeat Simple_repeat 4 55 0 4 632 230 116 23 0 chr17 6241815 6241858 -89030793 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4 632 369 275 22 0 chr17 6242968 6243059 -89029592 + PB1 SINE Alu 27 119 -8 4 632 793 245 30 6 chr17 6243061 6243225 -89029426 + B3 SINE B2 4 171 -45 4 632 358 250 114 0 chr17 6243351 6243439 -89029212 + PB1 SINE Alu 22 119 -8 4 632 329 0 24 0 chr17 6244012 6244053 -89028598 + (TTTC)n Simple_repeat Simple_repeat 2 43 0 4 632 1144 82 7 0 chr17 6244063 6244209 -89028442 - B1_Mus1 SINE Alu 0 148 2 4 632 710 181 112 8 chr17 6244226 6244360 -89028291 + B1_Mur2 SINE Alu 2 149 0 4 632 368 209 23 26 chr17 6245291 6245400 -89027251 + B1F SINE Alu 4 149 0 4 632 305 333 0 0 chr17 6245434 6245524 -89027127 + BC1_Mm scRNA scRNA 6 95 -57 4 632 311 215 31 0 chr17 6245529 6245594 -89027057 + ID4_ SINE ID 4 70 -13 4 632 181 327 43 92 chr17 6246246 6246593 -89026058 + L2 LINE L2 2668 2997 -422 4 632 288 0 0 0 chr17 6246838 6246870 -89025781 + (TCCC)n Simple_repeat Simple_repeat 4 35 0 4 632 607 222 138 43 chr17 6247270 6247458 -89025193 - ID_B1 SINE B4 -17 207 2 4 632 286 231 141 0 chr17 6247502 6247580 -89025071 - B1_Mus1 SINE Alu -54 94 6 4 632 721 307 60 4 chr17 6247682 6247901 -89024750 + B4A SINE B4 1 232 -60 4 632 946 182 114 0 chr17 6247901 6248077 -89024574 + B3 SINE B2 1 196 -20 4 632 419 152 13 0 chr17 6248080 6248159 -89024492 + (TGGA)n Simple_repeat Simple_repeat 1 80 0 4 632 256 257 0 119 chr17 6248178 6248262 -89024389 + B4A SINE B4 210 283 -9 4 632 1013 118 123 6 chr17 6248548 6248719 -89023932 + B2_Mm2 SINE B2 2 192 -3 4 632 249 309 39 54 chr17 6248751 6248881 -89023770 + MIRb SINE MIR 134 261 -7 4 632 304 241 60 0 chr17 6249284 6249367 -89023284 - ID_B1 SINE B4 -6 218 131 4 632 972 263 78 22 chr17 6249472 6249740 -89022911 - B4A SINE B4 -7 285 3 4 632 396 306 24 0 chr17 6249744 6249868 -89022783 - PB1 SINE Alu 0 127 1 4 632 237 88 0 0 chr17 6250388 6250422 -89022229 - RLTR8 LTR ERVK 0 365 332 4 632 1116 62 0 0 chr17 6250422 6250567 -89022084 + (GA)n Simple_repeat Simple_repeat 1 145 0 4 632 1055 103 7 0 chr17 6250567 6250713 -89021938 - RLTR8 LTR ERVK -218 147 1 4 632 2354 109 64 158 chr17 6250715 6251247 -89021404 + RLTR45 LTR ERVK 1 482 0 4 632 313 306 19 48 chr17 6251608 6251711 -89020940 + HAL1 LINE L1 580 679 -1828 4 632 227 307 260 0 chr17 6252291 6252418 -89020233 - Tigger10 DNA Tigger -501 1342 1183 4 632 1187 52 0 0 chr17 6252727 6252863 -89019788 + B1_Mm SINE Alu 1 136 -11 4 632 588 65 0 0 chr17 6252863 6252940 -89019711 + (GAAA)n Simple_repeat Simple_repeat 3 79 0 4 632 336 250 35 35 chr17 6252945 6253032 -89019619 + ID_B1 SINE B4 81 167 -57 4 632 314 287 73 39 chr17 6252946 6253061 -89019590 + PB1D10 SINE Alu 1 122 -27 4 632 2410 138 18 13 chr17 6253108 6253491 -89019160 - ORR1B1 LTR MaLR -9 385 1 4 632 1189 264 35 38 chr17 6255262 6255628 -89017023 + MTE2b LTR MaLR 11 375 -4 4 632 1577 62 0 0 chr17 6255628 6255820 -89016831 + B2_Mm1a SINE B2 2 193 0 4 632 572 201 14 0 chr17 6256180 6256319 -89016332 + (CATA)n Simple_repeat Simple_repeat 4 144 0 4 632 566 191 36 0 chr17 6256373 6256483 -89016168 - B3A SINE B2 -84 114 1 4 632 324 267 75 10 chr17 6257726 6257864 -89014787 + MIR3 SINE MIR 14 160 -48 4 632 444 294 20 53 chr17 6258073 6258175 -89014476 + RSINE1 SINE B4 4 104 -61 4 632 1105 77 0 0 chr17 6258175 6258318 -89014333 + B1_Mus1 SINE Alu 5 147 -1 4 632 444 294 20 53 chr17 6258318 6258366 -89014285 + RSINE1 SINE B4 105 149 -16 4 632 21 0 0 0 chr17 6258405 6258426 -89014225 + AT_rich Low_complexity Low_complexity 1 21 0 4 632 720 256 47 17 chr17 6259030 6259313 -89013338 - MTE2a LTR MaLR -26 353 1 4 632 335 336 132 71 chr17 6260404 6260699 -89011952 + L1M5 LINE L1 5455 5767 -406 4 632 779 240 8 137 chr17 6260868 6261124 -89011527 - ID_B1 SINE B4 -1 223 1 4 632 818 133 33 6 chr17 6261303 6261635 -89011016 + (CATA)n Simple_repeat Simple_repeat 1 341 0 4 632 2295 98 0 56 chr17 6261640 6261977 -89010674 - ORR1A3 LTR MaLR -8 318 1 4 632 228 100 0 0 chr17 6262840 6262880 -89009771 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 632 340 176 0 0 chr17 6263312 6263363 -89009288 - RSINE1 SINE B4 -110 55 5 4 632 420 303 149 40 chr17 6263812 6264087 -89008564 + LTR55 LTR ERV 55 359 -189 4 632 259 269 164 9 chr17 6264956 6264992 -89007659 - B1F SINE Alu 0 149 112 4 632 297 0 0 0 chr17 6264992 6265025 -89007626 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 4 632 259 269 164 9 chr17 6265025 6265104 -89007547 - B1F SINE Alu -38 111 17 4 632 587 191 26 17 chr17 6265159 6265276 -89007375 - B1_Mur1 SINE Alu -2 147 30 4 632 4975 109 46 19 chr17 6265348 6266136 -89006515 - RMER17D2 LTR ERVK 0 809 1 4 632 432 191 133 26 chr17 6266204 6266317 -89006334 - B4A SINE B4 -86 206 82 4 632 896 172 14 7 chr17 6266348 6266494 -89006157 + B1_Mus2 SINE Alu 1 147 0 4 632 302 280 30 0 chr17 6266499 6266599 -89006052 - Lx7 LINE L1 -9 7687 7585 4 632 318 259 33 11 chr17 6266600 6266690 -89005961 - B4A SINE B4 -199 93 2 4 632 386 296 164 53 chr17 6266715 6266904 -89005747 - B4A SINE B4 -81 211 2 4 632 312 245 27 54 chr17 6269582 6269694 -89002957 - MER81 DNA AcHobo -4 110 2 4 632 697 259 21 26 chr17 6271745 6271788 -89000863 - B3 SINE B2 -22 194 152 4 632 225 65 0 0 chr17 6271788 6271819 -89000832 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 632 705 222 13 0 chr17 6271819 6271969 -89000682 - B3A SINE B2 -46 152 2 4 632 354 274 66 41 chr17 6272921 6273043 -88999608 + PB1 SINE Alu 3 127 0 4 632 431 182 0 0 chr17 6273065 6273142 -88999509 + B1_Mur3 SINE Alu 45 121 -28 4 632 207 0 0 0 chr17 6273598 6273621 -88999030 + (C)n Simple_repeat Simple_repeat 1 23 0 4 632 661 237 21 14 chr17 6273629 6273770 -88998881 - B4A SINE B4 -63 229 88 4 632 473 260 132 115 chr17 6276301 6276588 -88996063 - B4A SINE B4 0 292 1 4 632 435 106 0 0 chr17 6276616 6276682 -88995969 + (TG)n Simple_repeat Simple_repeat 2 67 0 4 632 393 250 163 8 chr17 6276688 6276817 -88995834 - B4A SINE B4 -130 162 14 4 632 605 209 29 43 chr17 6276959 6277099 -88995552 - B1_Mur2 SINE Alu -10 139 2 4 632 314 371 33 13 chr17 6277272 6277425 -88995226 - L1MD3 LINE L1 -20 7975 7820 4 632 2258 110 71 101 chr17 6277987 6278165 -88994486 + MTC LTR MaLR 1 208 -213 4 632 2451 37 0 7 chr17 6278165 6278463 -88994188 + L1Md_F3 LINE L1 6277 6572 -12 4 632 2258 110 71 101 chr17 6278463 6278718 -88993933 + MTC LTR MaLR 209 421 0 4 632 471 274 40 43 chr17 6278718 6278996 -88993655 + RMER5 LTR ERV1 225 523 -11 4 632 705 221 22 51 chr17 6279713 6279933 -88992718 - B3A SINE B2 -2 214 5 5 632 396 0 0 0 chr17 6280947 6280991 -88991660 + (TAA)n Simple_repeat Simple_repeat 2 45 0 5 632 462 79 0 0 chr17 6281023 6281086 -88991565 + (TCC)n Simple_repeat Simple_repeat 2 64 0 5 632 672 315 46 7 chr17 6281453 6281734 -88990917 - B4A SINE B4 0 292 1 5 632 210 300 0 0 chr17 6282421 6282471 -88990180 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 632 399 309 69 89 chr17 6282693 6283060 -88989591 - MLT2B4 LTR ERVL -163 357 5 5 632 229 294 14 42 chr17 6283133 6283204 -88989447 - MIR SINE MIR -107 155 87 5 632 338 287 39 29 chr17 6283522 6283626 -88989025 + L1M4c LINE L1 812 916 -5468 5 632 958 264 178 15 chr17 6283698 6284226 -88988425 + L1M4c LINE L1 1031 1644 -4740 5 632 258 177 288 12 chr17 6284241 6284321 -88988330 + PB1D10 SINE Alu 4 105 -12 5 632 232 309 135 5 chr17 6284442 6284650 -88988001 + L1M4c LINE L1 1802 2036 -4348 5 632 297 182 0 68 chr17 6284658 6284717 -88987934 + ID2 SINE ID 20 74 -9 5 632 198 150 0 0 chr17 6284737 6284777 -88987874 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 632 269 234 68 130 chr17 6284892 6285054 -88987597 + L1M4c LINE L1 2298 2449 -3935 5 632 580 218 128 64 chr17 6285054 6285319 -88987332 + B4A SINE B4 1 282 -10 5 632 189 0 0 0 chr17 6285497 6285518 -88987133 + (T)n Simple_repeat Simple_repeat 1 21 0 5 632 397 93 7 0 chr17 6285518 6285588 -88987063 - B1_Mm SINE Alu 0 147 76 5 632 914 65 73 0 chr17 6285587 6285711 -88986940 + B1_Mus1 SINE Alu 13 145 -3 5 632 512 30 15 0 chr17 6285711 6285777 -88986874 + (GAA)n Simple_repeat Simple_repeat 2 68 0 5 632 779 87 8 65 chr17 6285782 6285881 -88986770 - RMER15 LTR ERVL -421 154 62 5 632 1000 105 246 11 chr17 6285881 6286064 -88986587 - URR1A DNA MER1_type 0 226 1 5 632 779 87 8 65 chr17 6286064 6286087 -88986564 - RMER15 LTR ERVL -514 61 39 5 632 315 237 56 63 chr17 6286233 6286359 -88986292 + L1MB3 LINE L1 5815 5939 -244 5 632 772 246 38 80 chr17 6287333 6287408 -88985243 - B4 SINE B4 -8 284 218 5 632 219 36 0 0 chr17 6287408 6287436 -88985215 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 5 632 772 246 38 80 chr17 6287436 6287647 -88985004 - B4 SINE B4 -75 217 10 5 632 542 196 102 9 chr17 6287949 6288057 -88984594 - B1_Mur1 SINE Alu -5 144 27 5 632 306 331 108 23 chr17 6287952 6288082 -88984569 - B4 SINE B4 -74 218 78 5 632 241 286 0 87 chr17 6289705 6289797 -88982854 - B3A SINE B2 -1 197 114 5 632 612 288 122 8 chr17 6289767 6290005 -88982646 - B4A SINE B4 -22 270 6 5 632 216 97 0 0 chr17 6290071 6290102 -88982549 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 632 332 316 76 34 chr17 6290102 6290220 -88982431 - RSINE1 SINE B4 -40 125 3 5 632 1608 32 16 0 chr17 6290960 6291149 -88981502 + B2_Mm1a SINE B2 2 193 0 5 632 213 283 0 0 chr17 6291343 6291396 -88981255 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 633 1240 41 0 0 chr17 6291698 6291845 -88980806 + B1_Mus1 SINE Alu 2 148 0 5 633 509 337 28 47 chr17 6292019 6292231 -88980420 - MIRb SINE MIR -36 232 25 5 633 347 333 86 25 chr17 6293126 6293323 -88979328 - B4A SINE B4 -8 284 76 5 633 203 171 0 0 chr17 6293373 6293414 -88979237 + A-rich Low_complexity Low_complexity 1 41 0 5 633 1277 58 94 0 chr17 6293564 6293735 -88978916 - B2_Mm2 SINE B2 -4 191 5 5 633 462 231 146 30 chr17 6293768 6293933 -88978718 + B3A SINE B2 3 186 -9 5 633 348 74 0 0 chr17 6296521 6296539 -88976112 + (T)n Simple_repeat Simple_repeat 1 18 0 5 633 1048 108 0 51 chr17 6296539 6296695 -88975956 - B1_Mus1 SINE Alu 0 148 1 5 633 348 74 0 0 chr17 6296695 6296730 -88975921 + (T)n Simple_repeat Simple_repeat 1 35 0 5 633 597 209 109 38 chr17 6298920 6299104 -88973547 + B3A SINE B2 1 197 -1 5 633 284 264 85 5 chr17 6299538 6299670 -88972981 + B4 SINE B4 3 152 -140 5 633 254 270 175 0 chr17 6299923 6300049 -88972602 + MIR SINE MIR 20 167 -95 5 633 186 247 195 0 chr17 6300514 6300591 -88972060 - MIR3 SINE MIR -27 181 90 5 633 201 39 0 0 chr17 6301326 6301352 -88971299 + (TTTTTG)n Simple_repeat Simple_repeat 6 31 0 5 633 235 291 6 6 chr17 6301500 6301680 -88970971 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 633 571 290 79 72 chr17 6301686 6301768 -88970883 - B4A SINE B4 0 292 211 5 633 505 299 6 19 chr17 6301768 6301925 -88970726 - RSINE1 SINE B4 -8 157 3 5 633 571 290 79 72 chr17 6301925 6302132 -88970519 - B4A SINE B4 -82 210 1 5 633 1113 197 118 45 chr17 6302246 6302533 -88970118 - ORR1B2 LTR MaLR -8 359 52 5 633 972 96 30 0 chr17 6302545 6302680 -88969971 + B1_Mur4 SINE Alu 1 139 -11 5 633 189 0 0 0 chr17 6303666 6303687 -88968964 + (CAGA)n Simple_repeat Simple_repeat 2 22 0 5 633 782 167 0 0 chr17 6304996 6305110 -88967541 + PB1D9 SINE Alu 1 114 -6 5 633 1006 217 15 0 chr17 6305116 6305319 -88967332 + B4A SINE B4 85 290 -2 5 633 180 0 0 0 chr17 6307973 6307993 -88964658 + (T)n Simple_repeat Simple_repeat 1 20 0 5 633 515 278 73 82 chr17 6308320 6308637 -88964014 - ORR1E LTR MaLR -8 351 38 5 633 2299 62 68 5 chr17 6308727 6309049 -88963602 - ORR1A2 LTR MaLR -10 317 1 5 633 869 296 12 25 chr17 6309197 6309478 -88963173 + B4A SINE B4 7 284 -8 5 633 626 233 24 48 chr17 6310034 6310201 -88962450 + RSINE1 SINE B4 3 165 0 5 633 689 276 158 16 chr17 6313303 6313550 -88959101 - MTEa LTR MaLR -29 350 69 5 633 381 184 143 42 chr17 6313539 6313658 -88958993 + MTEb LTR MaLR 211 341 -38 5 633 1939 191 51 53 chr17 6314075 6314173 -88958478 + MTC LTR MaLR 1 86 -335 5 633 1286 101 16 5 chr17 6314173 6314363 -88958288 - B2_Mm1t SINE B2 -1 192 1 5 633 1939 191 51 53 chr17 6314363 6314385 -88958266 + MTC LTR MaLR 87 103 -318 5 633 1379 82 5 26 chr17 6314385 6314574 -88958077 - B2_Mm2 SINE B2 -9 186 2 5 633 1939 191 51 53 chr17 6314574 6314866 -88957785 + MTC LTR MaLR 104 412 -9 5 633 180 281 144 30 chr17 6315027 6315159 -88957492 - MIR3 SINE MIR -20 188 42 5 633 700 255 46 37 chr17 6319221 6319510 -88953141 + MTE2a LTR MaLR 1 353 -26 5 633 21 0 0 0 chr17 6320114 6320135 -88952516 + AT_rich Low_complexity Low_complexity 1 21 0 5 633 444 294 20 53 chr17 6320174 6320222 -88952429 - RSINE1 SINE B4 -16 149 105 5 633 1135 70 0 0 chr17 6320222 6320365 -88952286 - B1_Mus1 SINE Alu -1 147 5 5 633 444 294 20 53 chr17 6320365 6320467 -88952184 - RSINE1 SINE B4 -61 104 4 5 633 324 267 75 10 chr17 6320676 6320814 -88951837 - MIR3 SINE MIR -48 160 14 5 633 566 191 36 0 chr17 6322040 6322150 -88950501 + B3A SINE B2 1 114 -84 5 633 622 189 26 0 chr17 6322204 6322357 -88950294 + (TATG)n Simple_repeat Simple_repeat 4 160 0 5 633 1577 62 0 0 chr17 6322717 6322909 -88949742 - B2_Mm1a SINE B2 0 193 2 5 633 1158 261 44 41 chr17 6322909 6323273 -88949378 - MTE2b LTR MaLR -4 375 11 5 633 216 0 0 0 chr17 6323408 6323432 -88949219 + (T)n Simple_repeat Simple_repeat 1 24 0 5 633 1839 80 11 31 chr17 6324990 6325280 -88947371 - RLTRETN_Mm LTR ERVK -27 356 1 5 633 3569 58 2 20 chr17 6325280 6325773 -88946878 - MMETn-int LTR ERVK 0 4844 4361 5 633 396 306 24 0 chr17 6325930 6326054 -88946597 + PB1 SINE Alu 1 127 0 5 633 950 267 78 22 chr17 6326058 6326326 -88946325 + B4A SINE B4 3 285 -7 5 633 304 241 60 0 chr17 6326431 6326514 -88946137 + ID_B1 SINE B4 131 218 -6 5 633 249 309 39 54 chr17 6326917 6327047 -88945604 - MIRb SINE MIR -7 261 134 5 633 1006 118 123 6 chr17 6327079 6327249 -88945402 - B2_Mm2 SINE B2 -4 191 2 5 633 239 284 0 119 chr17 6327535 6327619 -88945032 - B4A SINE B4 -9 283 210 5 633 1067 187 33 0 chr17 6327672 6327854 -88944797 - B3 SINE B2 -28 188 1 5 633 711 312 60 4 chr17 6327854 6328073 -88944578 - B4A SINE B4 -60 232 1 5 633 292 171 167 26 chr17 6328175 6328253 -88944398 + B1_Mus1 SINE Alu 6 94 -54 5 633 591 228 138 43 chr17 6328297 6328485 -88944166 + ID_B1 SINE B4 2 207 -17 5 633 612 0 0 0 chr17 6328885 6328953 -88943698 + (GGGA)n Simple_repeat Simple_repeat 4 71 0 5 633 320 215 31 0 chr17 6330173 6330238 -88942413 - ID4_ SINE ID -13 70 4 5 633 294 344 0 0 chr17 6330243 6330333 -88942318 - BC1_Mm scRNA scRNA -57 95 6 5 633 368 209 23 26 chr17 6330367 6330476 -88942175 - B1F SINE Alu 0 149 4 5 633 710 181 112 8 chr17 6331406 6331540 -88941111 - B1_Mur2 SINE Alu 0 149 2 5 633 1144 82 7 0 chr17 6331557 6331703 -88940948 + B1_Mus1 SINE Alu 2 148 0 5 633 329 0 24 0 chr17 6331713 6331754 -88940897 + (GAAA)n Simple_repeat Simple_repeat 2 43 0 5 633 358 250 114 0 chr17 6332326 6332414 -88940237 - PB1 SINE Alu -8 119 22 5 633 659 248 128 0 chr17 6332540 6332689 -88939962 - B3 SINE B2 -45 171 4 5 633 358 264 22 11 chr17 6332691 6332783 -88939868 - PB1 SINE Alu -8 119 27 5 633 1747 21 0 0 chr17 6333683 6333876 -88938775 + B2_Mm1t SINE B2 1 193 0 5 633 230 116 23 0 chr17 6334078 6334121 -88938530 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 5 633 195 129 0 0 chr17 6338126 6338157 -88934494 + (GGA)n Simple_repeat Simple_repeat 3 33 0 5 633 256 239 64 21 chr17 6339830 6339924 -88932727 + L1MC5 LINE L1 7302 7399 -562 5 633 1878 162 90 27 chr17 6340777 6341145 -88931506 + ORR1B1 LTR MaLR 2 392 -2 5 633 204 40 0 0 chr17 6343895 6343920 -88928731 + (TGG)n Simple_repeat Simple_repeat 3 27 0 5 633 2934 14 54 6 chr17 6344862 6345212 -88927439 - IAPLTR1_Mm LTR ERVK 0 367 1 5 633 29315 22 1 2 chr17 6345212 6348490 -88924161 - IAPEz-int LTR ERVK 0 6481 3209 5 633 8358 78 102 7 chr17 6348488 6349680 -88922971 - IAPEz-int LTR ERVK -5168 1313 8 5 633 2934 14 54 6 chr17 6349680 6350030 -88922621 - IAPLTR1_Mm LTR ERVK 0 367 1 5 633 480 72 0 0 chr17 6350487 6350556 -88922095 + (CA)n Simple_repeat Simple_repeat 2 70 0 6 633 673 176 80 1 chr17 6351126 6351269 -88921382 + MTD LTR MaLR 240 405 -14 6 633 261 0 0 0 chr17 6352147 6352176 -88920475 + (TG)n Simple_repeat Simple_repeat 1 29 0 6 633 233 281 15 15 chr17 6352213 6352278 -88920373 - RSINE1 SINE B4 -98 67 3 6 633 311 305 174 8 chr17 6352642 6352774 -88919877 - HAL1-3A_ME LINE L1 -420 2438 2285 6 633 326 208 64 13 chr17 6354068 6354146 -88918505 - L1MEg LINE L1 -4121 1963 1882 6 633 1241 41 0 7 chr17 6354162 6354310 -88918341 - B1_Mus2 SINE Alu 0 147 1 6 633 22 35 0 0 chr17 6354532 6354561 -88918090 + AT_rich Low_complexity Low_complexity 1 29 0 6 633 21 0 0 0 chr17 6354583 6354604 -88918047 + AT_rich Low_complexity Low_complexity 1 21 0 6 633 234 282 0 120 chr17 6355080 6355197 -88917454 - LTR87 LTR ERVL? -303 321 219 6 633 271 305 44 62 chr17 6355958 6356185 -88916466 + RMER17C LTR ERVK 129 351 -59 6 633 869 215 88 10 chr17 6357198 6357391 -88915260 + B3 SINE B2 4 211 -5 6 633 784 236 34 19 chr17 6357413 6357620 -88915031 + ID_B1 SINE B4 2 211 -13 6 633 283 253 21 0 chr17 6357761 6357839 -88914812 + PB1D10 SINE Alu 4 90 -59 6 633 354 361 148 32 chr17 6359665 6359854 -88912797 + L1ME3 LINE L1 4917 5127 -1019 6 633 786 296 90 55 chr17 6359920 6360500 -88912151 + L1ME3 LINE L1 5304 5903 -259 6 633 234 125 0 0 chr17 6360518 6360566 -88912085 + (A)n Simple_repeat Simple_repeat 1 48 0 6 633 288 0 0 0 chr17 6361085 6361117 -88911534 + (CAGG)n Simple_repeat Simple_repeat 2 33 0 6 633 239 237 34 0 chr17 6361210 6361269 -88911382 - MER57D LTR ERV1 -39 372 312 6 633 618 260 85 29 chr17 6362148 6362429 -88910222 + MMTV-int LTR ERVK 930 1226 -6027 6 633 632 303 57 59 chr17 6362511 6362932 -88909719 - MMTV-int LTR ERVK -2721 4532 4113 6 633 1277 21 7 0 chr17 6363385 6363530 -88909121 + B1_Mm SINE Alu 2 147 0 6 633 255 93 0 0 chr17 6363530 6363573 -88909078 + (A)n Simple_repeat Simple_repeat 1 43 0 6 633 389 239 0 0 chr17 6363747 6363839 -88908812 - MMTV-int LTR ERVK -3022 4384 4293 6 633 2066 294 24 30 chr17 6363848 6364692 -88907959 - MMTV-int LTR ERVK -3925 3328 2490 6 633 1125 310 67 40 chr17 6364693 6365410 -88907241 + MMTV-int LTR ERVK 4575 5284 -1969 6 633 561 355 19 41 chr17 6366590 6367174 -88905477 + MMTV-int LTR ERVK 6495 7065 -188 6 633 485 214 137 0 chr17 6367543 6367660 -88904991 + B3A SINE B2 1 133 -65 6 633 1094 182 218 45 chr17 6367670 6367982 -88904669 + ORR1D1 LTR MaLR 9 374 0 6 633 356 188 31 0 chr17 6367982 6368046 -88904605 + B3 SINE B2 141 206 -10 6 633 982 265 92 20 chr17 6368205 6368509 -88904142 + MLT1A0 LTR MaLR 40 365 0 6 633 2401 92 3 0 chr17 6368523 6368840 -88903811 + ORR1A2 LTR MaLR 2 319 -8 6 633 284 176 18 18 chr17 6370309 6370375 -88902276 + BC1_Mm scRNA scRNA 5 70 -13 6 633 1413 62 17 0 chr17 6371229 6371406 -88901245 + B2_Mm2 SINE B2 2 181 -14 6 633 529 251 82 64 chr17 6372167 6372398 -88900253 - B4A SINE B4 -20 272 2 6 633 180 333 40 0 chr17 6372566 6372641 -88900010 + MIRc SINE MIR 87 164 -104 6 633 1143 74 0 7 chr17 6372911 6373060 -88899591 - B1_Mus1 SINE Alu 0 148 1 6 633 369 301 69 17 chr17 6373105 6373242 -88899409 + MLT1A0 LTR MaLR 241 373 -17 6 633 318 336 214 0 chr17 6373433 6373653 -88898998 + L1M5 LINE L1 4694 4960 -1186 6 633 252 0 0 0 chr17 6373715 6373743 -88898908 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 6 633 801 104 92 46 chr17 6373743 6373874 -88898777 - B1_Mus1 SINE Alu -9 139 3 6 633 225 139 0 0 chr17 6373896 6373939 -88898712 + (T)n Simple_repeat Simple_repeat 1 43 0 6 633 1193 68 0 13 chr17 6373939 6374088 -88898563 - B1_Mus1 SINE Alu 0 148 2 6 633 438 106 0 29 chr17 6374144 6374212 -88898439 + B1_Mur1 SINE Alu 83 148 -1 6 633 1705 234 80 0 chr17 6374251 6374639 -88898012 - MTD LTR MaLR 0 419 1 6 633 1544 173 136 3 chr17 6374818 6374928 -88897723 - ORR1D1 LTR MaLR 0 374 228 6 633 212 0 36 0 chr17 6374928 6374956 -88897695 + (CAGG)n Simple_repeat Simple_repeat 3 31 0 6 633 1544 173 136 3 chr17 6374956 6375175 -88897476 - ORR1D1 LTR MaLR -147 227 1 6 633 320 276 29 106 chr17 6377399 6377423 -88895228 + CYRA11_Mm Unknown Y-chromosome 153 304 -308 6 633 745 132 0 85 chr17 6377423 6377564 -88895087 - URR1B DNA MER1_type -4 221 93 6 633 276 349 47 0 chr17 6378223 6378329 -88894322 - PB1 SINE Alu -16 111 1 6 633 331 212 0 15 chr17 6379134 6379201 -88893450 - Charlie12 DNA MER1_type -5 2868 2803 6 633 231 312 162 11 chr17 6379324 6379515 -88893136 - MER33 DNA MER1_type -2 322 103 6 633 206 220 0 35 chr17 6381979 6382064 -88890587 + (TCCA)n Simple_repeat Simple_repeat 1 82 0 6 633 293 269 34 0 chr17 6382129 6382309 -88890342 + (TCCA)n Simple_repeat Simple_repeat 1 186 0 6 633 358 185 112 69 chr17 6383589 6383705 -88888946 + B1F SINE Alu 9 129 -20 6 633 587 219 6 17 chr17 6383708 6383889 -88888762 + GA-rich Low_complexity Low_complexity 2 180 0 6 633 1176 68 0 0 chr17 6384335 6384482 -88888169 + B1_Mm SINE Alu 1 147 0 6 633 1695 31 0 0 chr17 6384632 6384824 -88887827 + B2_Mm1a SINE B2 1 192 -1 6 633 521 273 18 47 chr17 6385010 6385179 -88887472 + RSINE1 SINE B4 2 165 0 6 633 1146 168 54 0 chr17 6385195 6385398 -88887253 + B3 SINE B2 3 216 0 6 633 550 281 97 15 chr17 6386209 6386415 -88886236 - ID_B1 SINE B4 0 224 2 6 633 1104 203 30 0 chr17 6387203 6387405 -88885246 + B3 SINE B2 4 211 -5 6 633 1527 168 75 48 chr17 6387436 6387835 -88884816 - RMER17C LTR ERVK 0 410 1 6 633 203 176 0 0 chr17 6388273 6388307 -88884344 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 633 310 202 68 45 chr17 6388308 6388396 -88884255 - B2_Mm2 SINE B2 -8 187 98 6 633 243 179 43 43 chr17 6388530 6388600 -88884051 + L1M3b LINE L1 302 371 -5910 6 633 262 242 25 168 chr17 6388640 6388759 -88883892 + MLT1C LTR MaLR 163 264 -203 6 633 1135 225 81 94 chr17 6389064 6389467 -88883184 + MTE2a LTR MaLR 3 405 -14 6 633 348 269 0 24 chr17 6389792 6390219 -88882432 + G-rich Low_complexity Low_complexity 1 416 0 6 633 246 279 113 35 chr17 6390835 6390950 -88881701 - RSINE1 SINE B4 -35 130 7 6 633 1119 52 0 7 chr17 6391098 6391234 -88881417 + B1_Mus2 SINE Alu 1 135 -12 6 633 316 0 0 43 chr17 6391235 6391281 -88881370 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 6 633 587 203 6 28 chr17 6391647 6391829 -88880822 + (CATA)n Simple_repeat Simple_repeat 2 179 0 6 633 1048 226 15 5 chr17 6391865 6392065 -88880586 - ID_B1 SINE B4 -4 220 19 6 633 659 198 104 60 chr17 6392573 6392756 -88879895 + B3A SINE B2 2 192 -6 6 633 463 300 132 35 chr17 6392985 6393213 -88879438 - B4A SINE B4 -42 250 1 6 633 504 260 30 68 chr17 6393836 6393968 -88878683 - RSINE1 SINE B4 -37 128 2 6 633 199 133 22 22 chr17 6394674 6394720 -88877931 + CT-rich Low_complexity Low_complexity 5 50 0 6 633 293 243 68 0 chr17 6394730 6394804 -88877847 - ID2 SINE ID 0 83 5 6 633 1204 233 89 25 chr17 6395208 6395490 -88877161 + ORR1E LTR MaLR 5 304 -55 6 633 431 175 28 85 chr17 6395496 6395602 -88877049 - PB1D9 SINE Alu -12 108 9 6 633 474 255 19 0 chr17 6395687 6395793 -88876858 - RSINE1 SINE B4 -52 113 6 6 633 386 183 0 0 chr17 6396387 6396447 -88876204 + RMER6A LTR ERVK 683 742 -14 6 633 370 279 116 9 chr17 6396863 6396975 -88875676 - B1F1 SINE Alu -2 147 24 6 633 454 276 103 0 chr17 6396993 6397109 -88875542 - B3 SINE B2 -8 208 81 6 633 474 220 103 109 chr17 6397140 6397321 -88875330 - RMER30 DNA MER1_type -25 177 58 6 633 1605 201 102 8 chr17 6397321 6397702 -88874949 - MTD LTR MaLR 0 419 3 6 633 474 263 20 145 chr17 6397702 6397759 -88874892 - RMER30 DNA MER1_type -145 57 3 6 633 372 22 0 0 chr17 6399336 6399381 -88873270 + (TCTCTG)n Simple_repeat Simple_repeat 4 48 0 6 633 301 266 0 28 chr17 6399381 6399453 -88873198 + BC1_Mm scRNA scRNA 2 73 -10 6 633 222 146 0 68 chr17 6399460 6399548 -88873103 + G-rich Low_complexity Low_complexity 1 82 0 6 633 1396 96 16 0 chr17 6399603 6399791 -88872860 + B2_Mm1t SINE B2 3 193 0 6 633 510 222 0 69 chr17 6400792 6400908 -88871743 + PB1D10 SINE Alu 3 110 -7 6 633 412 327 98 25 chr17 6400971 6401134 -88871517 + B4 SINE B4 55 229 -63 6 633 561 226 84 57 chr17 6401147 6401333 -88871318 + B3A SINE B2 2 210 -6 6 633 202 274 0 0 chr17 6401387 6401438 -88871213 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 633 868 183 7 0 chr17 6401492 6401634 -88871017 - B1_Mur4 SINE Alu -6 144 2 6 633 301 277 8 112 chr17 6402457 6402591 -88870060 + PB1 SINE Alu 1 120 -7 6 633 776 256 73 30 chr17 6402781 6403015 -88869636 + B4A SINE B4 48 291 -1 6 633 957 174 28 0 chr17 6403280 6403458 -88869193 + MTC LTR MaLR 1 183 -238 6 633 1053 116 188 0 chr17 6403493 6403674 -88868977 + URR1B DNA MER1_type 1 215 -10 6 633 5085 136 71 43 chr17 6404311 6404979 -88867672 + Lx5 LINE L1 6164 6799 -251 6 633 2996 63 200 9 chr17 6404979 6405409 -88867242 + RLTR1B LTR ERV1 1 512 0 6 633 5085 136 71 43 chr17 6405409 6405603 -88867048 + Lx5 LINE L1 6800 7050 0 6 633 1238 61 0 0 chr17 6405625 6405772 -88866879 + B1_Mm SINE Alu 1 147 0 6 633 192 77 0 0 chr17 6405922 6405948 -88866703 + (T)n Simple_repeat Simple_repeat 1 26 0 6 633 377 285 20 105 chr17 6406994 6407028 -88865623 + MT2B LTR ERVL 139 159 -442 6 633 804 200 14 14 chr17 6407028 6407175 -88865476 + B1_Mus2 SINE Alu 1 147 0 7 633 1066 199 11 0 chr17 6407182 6407363 -88865288 + B3 SINE B2 9 191 -25 7 633 529 225 68 30 chr17 6407542 6407675 -88864976 + ID_B1 SINE B4 86 223 -1 7 633 632 233 75 0 chr17 6407789 6407922 -88864729 + B1_Mur1 SINE Alu 2 144 -5 7 633 1082 264 31 119 chr17 6408391 6408804 -88863847 + MTE2a LTR MaLR 1 377 -2 7 633 533 226 62 62 chr17 6409090 6409236 -88863415 + B1_Mur2 SINE Alu 3 148 -1 7 633 1019 183 56 0 chr17 6409322 6409519 -88863132 - B3 SINE B2 -2 214 7 7 633 24 0 0 0 chr17 6409673 6409697 -88862954 + AT_rich Low_complexity Low_complexity 1 24 0 7 633 1119 206 5 9 chr17 6409699 6409915 -88862736 - B3 SINE B2 0 216 2 7 633 195 100 0 0 chr17 6411110 6411140 -88861511 + (A)n Simple_repeat Simple_repeat 1 30 0 7 633 369 58 0 0 chr17 6411467 6411519 -88861132 + (TATG)n Simple_repeat Simple_repeat 1 52 0 7 633 1004 162 79 101 chr17 6411620 6411707 -88860944 - URR1A DNA MER1_type 0 226 146 7 633 1410 52 0 77 chr17 6411707 6411863 -88860788 + B2_Mm1a SINE B2 1 156 -37 7 633 207 0 0 0 chr17 6411863 6411886 -88860765 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 7 633 1410 52 0 77 chr17 6411886 6411938 -88860713 + B2_Mm1a SINE B2 157 193 0 7 633 1004 162 79 101 chr17 6411938 6412077 -88860574 - URR1A DNA MER1_type -81 145 5 7 633 341 244 8 0 chr17 6412142 6412154 -88860497 + polypurine Low_complexity Low_complexity 2 13 0 7 633 1678 26 0 5 chr17 6412154 6412348 -88860303 + B2_Mm1a SINE B2 1 193 0 7 633 341 244 8 0 chr17 6412348 6412378 -88860273 + polypurine Low_complexity Low_complexity 14 43 0 7 633 1115 107 6 0 chr17 6412378 6412556 -88860095 + (GAA)n Simple_repeat Simple_repeat 2 180 0 7 633 341 244 8 0 chr17 6412556 6412635 -88860016 + GA-rich Low_complexity Low_complexity 44 123 0 7 633 603 333 70 56 chr17 6412666 6412952 -88859699 + B4 SINE B4 1 290 -2 7 633 246 81 0 0 chr17 6412997 6413034 -88859617 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 633 744 251 106 0 chr17 6413055 6413234 -88859417 + B3A SINE B2 1 198 0 7 633 560 341 41 38 chr17 6413923 6414064 -88858587 - Charlie4a DNA MER1_type -89 419 281 7 633 4554 34 24 0 chr17 6414064 6414599 -88858052 + L1Md_F2 LINE L1 6031 6578 -4 7 633 1677 27 0 0 chr17 6414599 6414786 -88857865 + B2_Mm1a SINE B2 2 188 -5 7 633 560 341 41 38 chr17 6414786 6414984 -88857667 - Charlie4a DNA MER1_type -228 280 79 7 633 932 266 5 18 chr17 6414984 6415202 -88857449 + B3 SINE B2 1 215 -1 7 633 416 237 278 63 chr17 6415584 6415772 -88856879 + B4 SINE B4 10 247 -45 7 633 1358 96 43 0 chr17 6415772 6415959 -88856692 + B2_Mm2 SINE B2 1 195 0 7 633 416 247 169 90 chr17 6415959 6416005 -88856646 + B4 SINE B4 248 288 -4 7 633 2502 140 29 41 chr17 6417229 6417647 -88855004 + MTC LTR MaLR 1 413 -8 7 633 217 255 20 0 chr17 6418830 6418881 -88853770 + PB1 SINE Alu 2 53 -74 7 633 323 173 133 0 chr17 6419375 6419450 -88853201 + B4A SINE B4 1 85 -207 7 633 3111 12 0 23 chr17 6419997 6420351 -88852300 + ORR1A0 LTR MaLR 1 346 0 7 633 2543 115 66 8 chr17 6420351 6420746 -88851905 + MTC LTR MaLR 4 421 0 7 633 456 235 221 76 chr17 6421464 6421713 -88850938 - MTE2a LTR MaLR -9 370 86 7 633 574 226 26 0 chr17 6421714 6421829 -88850822 + B1_Mur1 SINE Alu 2 119 -30 7 633 3796 92 4 13 chr17 6421838 6422369 -88850282 + Lx4A LINE L1 6533 7058 0 7 633 241 301 138 0 chr17 6422396 6422519 -88850132 - MTD LTR MaLR -279 140 1 7 634 384 308 8 17 chr17 6422535 6422654 -88849997 - MER44D DNA MER2_type -587 118 1 7 634 731 251 80 189 chr17 6423022 6423445 -88849206 - MTE2a LTR MaLR 0 379 3 7 634 214 309 54 3 chr17 6424796 6424875 -88847776 - MIR SINE MIR -99 169 83 7 634 606 228 14 22 chr17 6425077 6425216 -88847435 + B1_Mur1 SINE Alu 5 142 -7 7 634 862 42 17 8 chr17 6425532 6425651 -88847000 + (TTTC)n Simple_repeat Simple_repeat 3 122 0 7 634 658 164 0 0 chr17 6425651 6425755 -88846896 - B1_Mur3 SINE Alu -12 137 34 7 634 348 148 0 0 chr17 6426577 6426638 -88846013 + (TCC)n Simple_repeat Simple_repeat 1 61 0 7 634 618 297 63 96 chr17 6426787 6426828 -88845823 + B4A SINE B4 1 38 -254 7 634 2525 80 6 0 chr17 6426828 6427153 -88845498 - ORR1A2 LTR MaLR 0 327 1 7 634 618 297 63 96 chr17 6427153 6427413 -88845238 + B4A SINE B4 39 292 0 7 634 309 220 208 17 chr17 6427776 6427896 -88844755 - MLT1A0 LTR MaLR -4 361 219 7 634 337 175 180 30 chr17 6427904 6428004 -88844647 - PB1D10 SINE Alu 0 117 3 7 634 442 125 0 0 chr17 6428067 6428147 -88844504 - L1Md_F2 LINE L1 -2 6580 6501 7 634 487 232 165 68 chr17 6428167 6428343 -88844308 - B3A SINE B2 -2 193 1 7 634 1202 48 0 14 chr17 6428701 6428848 -88843803 - B1_Mm SINE Alu 0 147 3 7 634 183 276 152 29 chr17 6430826 6430964 -88841687 + MIR3 SINE MIR 42 196 -12 7 634 1949 191 51 48 chr17 6431119 6431411 -88841240 - MTC LTR MaLR -8 413 106 7 634 1364 87 5 26 chr17 6431411 6431600 -88841051 + B2_Mm2 SINE B2 2 186 -9 7 634 1949 191 51 48 chr17 6431600 6431622 -88841029 - MTC LTR MaLR -316 105 88 7 634 1283 105 16 5 chr17 6431622 6431813 -88840838 + B2_Mm1t SINE B2 1 193 0 7 634 1949 191 51 48 chr17 6431813 6431909 -88840742 - MTC LTR MaLR -334 87 3 7 634 360 204 143 50 chr17 6432326 6432445 -88840206 - MTE2b LTR MaLR -39 340 211 7 634 715 249 167 17 chr17 6432448 6432681 -88839970 + MTEa LTR MaLR 83 350 -29 7 634 626 233 24 48 chr17 6435786 6435953 -88836698 - RSINE1 SINE B4 0 165 3 7 634 909 301 25 35 chr17 6436508 6436790 -88835861 - B4A SINE B4 -7 285 7 7 634 2329 56 68 5 chr17 6436938 6437259 -88835392 + ORR1A2 LTR MaLR 1 316 -11 7 634 236 260 40 14 chr17 6437259 6437333 -88835318 - RLTR9E LTR ERVK 0 409 334 7 634 561 275 73 82 chr17 6437350 6437667 -88834984 + ORR1E LTR MaLR 38 351 -8 7 634 207 0 0 0 chr17 6437994 6438017 -88834634 + (A)n Simple_repeat Simple_repeat 1 23 0 7 634 25 0 0 0 chr17 6439669 6439694 -88832957 + AT_rich Low_complexity Low_complexity 1 25 0 7 634 991 227 15 0 chr17 6440675 6440878 -88831773 - B4A SINE B4 -2 290 85 7 634 782 167 0 0 chr17 6440884 6440998 -88831653 - PB1D9 SINE Alu -6 114 1 7 634 225 0 0 0 chr17 6442307 6442332 -88830319 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 7 634 948 104 30 0 chr17 6443311 6443446 -88829205 - B1_Mur4 SINE Alu -11 139 1 7 634 1104 194 122 49 chr17 6443458 6443745 -88828906 + ORR1B2 LTR MaLR 52 359 -8 7 634 346 278 50 62 chr17 6443897 6444058 -88828593 + B4A SINE B4 49 207 -85 7 634 510 299 6 19 chr17 6444066 6444223 -88828428 + RSINE1 SINE B4 3 157 -8 7 634 215 278 8 0 chr17 6444286 6444412 -88828239 + (CA)n Simple_repeat Simple_repeat 2 128 0 7 634 226 240 0 20 chr17 6445863 6445914 -88826737 - MIR SINE MIR -95 167 118 7 634 292 185 0 0 chr17 6446320 6446374 -88826277 - B4A SINE B4 -236 56 3 7 634 548 203 109 38 chr17 6446808 6446992 -88825659 - B3A SINE B2 -1 197 1 7 634 7742 32 0 2 chr17 6448668 6449599 -88823052 - RLTR13B3 LTR ERVK 0 929 1 7 634 233 49 0 68 chr17 6450117 6450142 -88822509 + (A)n Simple_repeat Simple_repeat 1 25 0 7 634 994 101 0 51 chr17 6450142 6450298 -88822353 + B1_Mus1 SINE Alu 1 148 0 7 634 233 49 0 68 chr17 6450298 6450316 -88822335 + (A)n Simple_repeat Simple_repeat 1 16 0 7 634 429 231 146 30 chr17 6452904 6453069 -88819582 - B3A SINE B2 -9 186 3 7 634 1207 58 94 0 chr17 6453102 6453273 -88819378 + B2_Mm2 SINE B2 5 191 -4 7 634 228 130 0 0 chr17 6453423 6453469 -88819182 + (T)n Simple_repeat Simple_repeat 1 46 0 7 634 297 313 135 39 chr17 6453560 6453716 -88818935 + B4A SINE B4 114 284 -8 7 634 495 350 24 42 chr17 6454614 6454826 -88817825 + MIRb SINE MIR 25 232 -36 7 634 1137 54 0 0 chr17 6454997 6455144 -88817507 - B1_Mus1 SINE Alu 0 148 2 7 634 201 255 0 0 chr17 6455446 6455493 -88817158 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 634 1526 32 16 0 chr17 6455683 6455872 -88816779 - B2_Mm1a SINE B2 0 193 2 7 634 328 366 65 7 chr17 6456614 6456768 -88815883 + RSINE1 SINE B4 3 165 0 7 634 273 304 68 10 chr17 6456817 6456920 -88815731 + B3A SINE B2 6 114 -84 7 634 601 256 105 5 chr17 6456855 6457055 -88815596 + B4A SINE B4 51 270 -22 7 634 272 331 108 23 chr17 6458708 6458838 -88813813 + B4 SINE B4 78 218 -74 7 634 502 196 102 9 chr17 6458733 6458841 -88813810 + B1_Mur1 SINE Alu 27 144 -5 7 634 685 259 31 73 chr17 6459143 6459354 -88813297 + B4 SINE B4 10 217 -75 7 634 183 42 0 0 chr17 6459354 6459378 -88813273 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 7 634 685 259 31 73 chr17 6459378 6459453 -88813198 + B4 SINE B4 218 284 -8 7 634 300 283 40 48 chr17 6460427 6460553 -88812098 - L1MB3 LINE L1 -244 5939 5815 7 634 741 132 42 56 chr17 6460689 6460722 -88811929 + RMER15 LTR ERVL 27 61 -514 7 634 946 99 246 11 chr17 6460722 6460905 -88811746 + URR1A DNA MER1_type 1 226 0 7 634 741 132 42 56 chr17 6460905 6461015 -88811636 + RMER15 LTR ERVL 62 168 -407 7 634 480 53 40 0 chr17 6461015 6461091 -88811560 + (TTC)n Simple_repeat Simple_repeat 2 80 0 7 634 894 63 71 0 chr17 6461091 6461218 -88811433 - B1_Mus1 SINE Alu 0 148 13 7 634 375 93 7 0 chr17 6461217 6461287 -88811364 + B1_Mm SINE Alu 76 147 0 7 634 318 26 0 0 chr17 6461287 6461326 -88811325 + (A)n Simple_repeat Simple_repeat 1 39 0 8 634 229 327 19 19 chr17 6461332 6461438 -88811213 - L1M4c LINE L1 -3829 2547 2442 8 634 529 231 122 59 chr17 6461503 6461774 -88810877 - B4A SINE B4 -4 288 1 8 634 269 234 68 130 chr17 6461774 6461936 -88810715 - L1M4c LINE L1 -3935 2449 2298 8 634 198 150 0 0 chr17 6462051 6462091 -88810560 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 634 273 182 0 68 chr17 6462111 6462170 -88810481 - ID2 SINE ID -9 74 20 8 634 978 288 213 45 chr17 6462178 6462507 -88810144 - L1M4c LINE L1 -4348 2036 1645 8 634 228 177 288 12 chr17 6462507 6462587 -88810064 - PB1D10 SINE Alu -12 105 4 8 634 978 288 213 45 chr17 6462587 6463306 -88809345 - L1M4c LINE L1 -4740 1644 812 8 634 214 298 18 0 chr17 6463637 6463694 -88808957 + MIR SINE MIR 97 154 -108 8 634 371 285 49 79 chr17 6463768 6463932 -88808719 + MLT2B4 LTR ERVL 5 163 -393 8 634 210 300 0 0 chr17 6464357 6464407 -88808244 + (TA)n Simple_repeat Simple_repeat 2 51 0 8 634 575 312 46 7 chr17 6465094 6465375 -88807276 + B4A SINE B4 1 292 0 8 634 255 61 0 0 chr17 6465735 6465768 -88806883 + (GGA)n Simple_repeat Simple_repeat 2 34 0 8 634 180 0 0 0 chr17 6465800 6465820 -88806831 + (TTA)n Simple_repeat Simple_repeat 2 21 0 8 634 645 232 9 132 chr17 6466834 6467053 -88805598 + B3A SINE B2 5 196 -2 8 634 710 258 121 48 chr17 6467770 6468048 -88804603 - RMER5 LTR ERV1 -11 523 225 8 634 2098 110 72 99 chr17 6468048 6468302 -88804349 - MTC LTR MaLR 0 421 209 8 634 2301 41 0 7 chr17 6468302 6468600 -88804051 - L1Md_F3 LINE L1 -12 6572 6277 8 634 2098 110 72 99 chr17 6468600 6468778 -88803873 - MTC LTR MaLR -213 208 1 8 634 237 373 35 7 chr17 6469340 6469483 -88803168 + L1MD3 LINE L1 7820 7966 -29 8 634 571 216 29 22 chr17 6469666 6469803 -88802848 + B1_Mur2 SINE Alu 2 139 -10 8 634 278 203 28 26 chr17 6469969 6470047 -88802604 + B4A SINE B4 59 138 -154 8 634 474 88 0 0 chr17 6470070 6470138 -88802513 + (CA)n Simple_repeat Simple_repeat 2 69 0 8 634 412 272 132 118 chr17 6470178 6470466 -88802185 + B4A SINE B4 1 292 0 8 634 21 36 0 0 chr17 6470467 6470495 -88802156 + AT_rich Low_complexity Low_complexity 1 28 0 8 634 610 235 24 1 chr17 6473013 6473150 -88799501 + B4A SINE B4 98 236 -56 8 634 207 0 0 0 chr17 6473150 6473173 -88799478 + (G)n Simple_repeat Simple_repeat 1 23 0 8 634 531 286 26 7 chr17 6473173 6473190 -88799461 + B4 SINE B4 237 253 -39 8 634 405 182 0 0 chr17 6473626 6473703 -88798948 - B1_Mur3 SINE Alu -28 121 45 8 634 316 282 66 41 chr17 6473725 6473847 -88798804 - PB1 SINE Alu 0 127 3 8 634 680 214 13 0 chr17 6474775 6474926 -88797725 + B3A SINE B2 1 152 -46 8 634 309 68 0 0 chr17 6474926 6474970 -88797681 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 634 670 253 21 21 chr17 6474970 6475012 -88797639 + B3 SINE B2 152 194 -22 8 634 282 245 31 31 chr17 6477061 6477158 -88795493 + MER81 DNA AcHobo 2 98 -16 8 634 335 302 164 53 chr17 6479553 6479742 -88792909 + B4A SINE B4 2 211 -81 8 634 295 259 33 11 chr17 6479767 6479857 -88792794 + B4A SINE B4 2 93 -199 8 634 331 286 20 0 chr17 6479860 6479958 -88792693 + Lx7 LINE L1 7588 7687 -9 8 634 844 166 0 7 chr17 6479963 6480103 -88792548 - B1_Mus2 SINE Alu 0 147 9 8 634 405 285 40 93 chr17 6479968 6480119 -88792532 - B4 SINE B4 -70 222 80 8 634 358 202 143 27 chr17 6480140 6480252 -88792399 + B4A SINE B4 82 206 -86 8 634 4604 111 46 19 chr17 6480320 6481108 -88791543 + RMER17D2 LTR ERVK 1 809 0 8 634 537 200 26 17 chr17 6481180 6481297 -88791354 + B1_Mur1 SINE Alu 30 147 -2 8 634 229 269 164 9 chr17 6481352 6481431 -88791220 + B1F SINE Alu 16 110 -39 8 634 333 0 0 0 chr17 6481431 6481468 -88791183 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 8 634 229 269 164 9 chr17 6481468 6481504 -88791147 + B1F SINE Alu 111 148 -1 8 634 347 299 164 24 chr17 6482398 6482648 -88790003 - LTR55 LTR ERV -209 339 55 8 634 334 157 0 0 chr17 6483097 6483148 -88789503 + RSINE1 SINE B4 5 55 -110 8 634 206 118 0 0 chr17 6483580 6483614 -88789037 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 634 2159 98 0 56 chr17 6484477 6484814 -88787837 + ORR1A3 LTR MaLR 1 318 -8 8 634 834 145 27 6 chr17 6484819 6485153 -88787498 + (TATG)n Simple_repeat Simple_repeat 1 341 0 8 634 702 240 8 137 chr17 6485332 6485588 -88787063 + ID_B1 SINE B4 1 223 -1 8 634 186 43 0 0 chr17 6486074 6486097 -88786554 + (T)n Simple_repeat Simple_repeat 1 23 0 8 634 180 0 0 0 chr17 6486168 6486188 -88786463 + (CCCCCA)n Simple_repeat Simple_repeat 2 21 0 8 634 656 256 46 44 chr17 6487156 6487452 -88785199 + MTE2a LTR MaLR 1 357 -22 8 634 21 0 0 0 chr17 6488049 6488070 -88784581 + AT_rich Low_complexity Low_complexity 1 21 0 8 634 395 294 20 53 chr17 6488109 6488157 -88784494 - RSINE1 SINE B4 -16 149 105 8 634 1072 70 0 0 chr17 6488157 6488300 -88784351 - B1_Mus1 SINE Alu -1 147 5 8 634 395 294 20 53 chr17 6488300 6488402 -88784249 - RSINE1 SINE B4 -61 104 4 8 634 305 260 75 10 chr17 6488611 6488749 -88783902 - MIR3 SINE MIR -48 160 14 8 634 526 191 36 0 chr17 6489992 6490102 -88782549 + B3A SINE B2 1 114 -84 8 634 455 210 17 0 chr17 6490156 6490275 -88782376 + (TATG)n Simple_repeat Simple_repeat 4 124 0 8 634 1478 58 11 0 chr17 6490626 6490816 -88781835 - B2_Mm1a SINE B2 0 193 2 8 634 1113 266 32 50 chr17 6490816 6491182 -88781469 - MTE2b LTR MaLR -9 370 11 8 634 216 0 0 0 chr17 6491317 6491341 -88781310 + (T)n Simple_repeat Simple_repeat 1 24 0 8 634 225 152 0 42 chr17 6493556 6493604 -88779047 - HAL1 LINE L1 -1462 1045 1000 8 634 2266 138 18 13 chr17 6493622 6494005 -88778646 + ORR1B1 LTR MaLR 1 385 -9 8 634 273 287 73 39 chr17 6494052 6494167 -88778484 - PB1D10 SINE Alu -27 122 1 8 634 300 250 35 35 chr17 6494081 6494168 -88778483 - ID_B1 SINE B4 -57 167 81 8 634 372 94 0 0 chr17 6494183 6494236 -88778415 + (TTTC)n Simple_repeat Simple_repeat 3 55 0 8 634 1182 54 0 0 chr17 6494236 6494383 -88778268 - B1_Mm SINE Alu 0 147 1 8 634 245 306 19 48 chr17 6495399 6495502 -88777149 - HAL1 LINE L1 -1828 679 580 8 634 2184 109 64 156 chr17 6495863 6496394 -88776257 - RLTR45 LTR ERVK 0 482 1 8 634 997 103 7 0 chr17 6496396 6496542 -88776109 + RLTR8 LTR ERVK 1 147 -218 8 634 1137 113 0 0 chr17 6496542 6496745 -88775906 + (TC)n Simple_repeat Simple_repeat 1 203 0 8 634 361 306 24 0 chr17 6497299 6497423 -88775228 + PB1 SINE Alu 1 127 0 8 634 881 263 78 22 chr17 6497427 6497695 -88774956 + B4A SINE B4 3 285 -7 8 634 281 241 60 0 chr17 6497800 6497883 -88774768 + ID_B1 SINE B4 131 218 -6 8 634 233 331 31 46 chr17 6498286 6498416 -88774235 - MIRb SINE MIR -7 261 134 8 634 948 118 123 6 chr17 6498448 6498619 -88774032 - B2_Mm2 SINE B2 -3 192 2 8 634 236 257 0 119 chr17 6498905 6498989 -88773662 - B4A SINE B4 -9 283 210 8 634 419 152 13 0 chr17 6499008 6499087 -88773564 + (TCCA)n Simple_repeat Simple_repeat 1 80 0 8 634 881 176 114 0 chr17 6499090 6499266 -88773385 - B3 SINE B2 -20 196 1 8 634 658 307 60 4 chr17 6499266 6499485 -88773166 - B4A SINE B4 -60 232 1 8 634 260 231 141 0 chr17 6499587 6499665 -88772986 + B1_Mus1 SINE Alu 6 94 -54 8 634 537 222 138 43 chr17 6499709 6499897 -88772754 + ID_B1 SINE B4 2 207 -17 8 634 576 0 0 0 chr17 6500297 6500361 -88772290 + (GGGA)n Simple_repeat Simple_repeat 4 67 0 1 634 301 215 31 0 chr17 6501605 6501670 -88770981 - ID4_ SINE ID -13 70 4 2 634 220 360 0 0 chr17 6501690 6501765 -88770886 - ID4_ SINE ID -3 80 6 3 634 367 209 23 26 chr17 6501799 6501908 -88770743 - B1F SINE Alu 0 149 4 4 634 710 181 112 8 chr17 6502839 6502973 -88769678 - B1_Mur2 SINE Alu 0 149 2 5 634 1159 75 7 0 chr17 6502990 6503136 -88769515 + B1_Mus1 SINE Alu 2 148 0 6 634 293 0 27 0 chr17 6503148 6503185 -88769466 + (GAAA)n Simple_repeat Simple_repeat 2 39 0 7 634 355 222 28 0 chr17 6503789 6503877 -88768774 - PB1D10 SINE Alu -8 119 22 8 634 669 242 128 0 chr17 6504003 6504152 -88768499 - B3 SINE B2 -45 171 4 9 634 356 264 22 11 chr17 6504154 6504246 -88768405 - PB1 SINE Alu -8 119 27 1 634 230 116 23 0 chr17 6505356 6505399 -88767252 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1 634 240 59 19 38 chr17 6508622 6508675 -88763976 + (CAAA)n Simple_repeat Simple_repeat 2 53 0 1 634 195 129 0 0 chr17 6509459 6509490 -88763161 + (GGA)n Simple_repeat Simple_repeat 3 33 0 1 634 256 239 64 21 chr17 6511165 6511259 -88761392 + L1MC5 LINE L1 7302 7399 -562 1 634 206 214 54 0 chr17 6511801 6511857 -88760794 + L2a LINE L2 3367 3425 -1 1 634 1863 165 90 27 chr17 6512112 6512480 -88760171 + ORR1B1 LTR MaLR 2 392 -2 1 634 315 200 130 28 chr17 6512782 6512890 -88759761 + HAL1 LINE L1 2267 2385 -122 1 634 204 40 0 0 chr17 6515230 6515255 -88757396 + (TGG)n Simple_repeat Simple_repeat 3 27 0 1 634 498 86 0 0 chr17 6516644 6516725 -88755926 + (CA)n Simple_repeat Simple_repeat 2 82 0 1 634 686 242 150 14 chr17 6517215 6517438 -88755213 + MTD LTR MaLR 167 405 -14 2 634 226 297 15 15 chr17 6518364 6518429 -88754222 - RSINE1 SINE B4 -98 67 3 2 634 222 189 54 0 chr17 6518850 6518961 -88753690 + CT-rich Low_complexity Low_complexity 2 118 0 2 634 189 0 0 0 chr17 6520267 6520288 -88752363 + (T)n Simple_repeat Simple_repeat 1 21 0 2 634 1197 55 0 7 chr17 6520288 6520436 -88752215 - B1_Mus2 SINE Alu 0 147 1 2 634 23 33 0 0 chr17 6520645 6520675 -88751976 + AT_rich Low_complexity Low_complexity 1 30 0 2 634 234 282 0 120 chr17 6521192 6521309 -88751342 - LTR87 LTR ERVL? -303 321 219 2 634 261 286 57 75 chr17 6521993 6522220 -88750431 + RMER17C LTR ERVK 129 351 -59 2 634 869 215 88 10 chr17 6523233 6523426 -88749225 + B3 SINE B2 4 211 -5 2 634 784 236 34 19 chr17 6523448 6523655 -88748996 + ID_B1 SINE B4 2 211 -13 2 634 283 253 21 0 chr17 6523796 6523874 -88748777 + PB1D10 SINE Alu 4 90 -59 3 634 354 361 148 32 chr17 6525700 6525889 -88746762 + L1ME3 LINE L1 4917 5127 -1019 3 634 754 299 90 53 chr17 6525955 6526534 -88746117 + L1ME3 LINE L1 5304 5903 -259 3 634 261 0 0 0 chr17 6526552 6526581 -88746070 + (A)n Simple_repeat Simple_repeat 1 29 0 3 634 216 0 0 0 chr17 6527100 6527124 -88745527 + (CAGG)n Simple_repeat Simple_repeat 2 25 0 3 634 239 237 34 0 chr17 6527217 6527276 -88745375 - MER57D LTR ERV1 -39 372 312 3 634 1601 27 16 0 chr17 6527974 6528158 -88744493 - B2_Mm1a SINE B2 -6 187 1 3 634 618 260 85 29 chr17 6528355 6528636 -88744015 + MMTV-int LTR ERVK 930 1226 -6027 3 634 645 299 60 60 chr17 6528718 6529138 -88743513 - MMTV-int LTR ERVK -2721 4532 4113 3 634 1880 302 53 48 chr17 6529265 6530703 -88741948 - MMTV-int LTR ERVK -3318 3935 2490 3 634 1222 290 70 40 chr17 6530704 6531422 -88741229 + MMTV-int LTR ERVK 4575 5284 -1969 3 634 513 348 55 59 chr17 6532407 6533371 -88739280 + MMTV-int LTR ERVK 6294 7253 0 3 634 496 212 177 0 chr17 6533566 6533679 -88738972 + B3A SINE B2 1 133 -65 3 634 1057 189 218 45 chr17 6533689 6534001 -88738650 + ORR1D1 LTR MaLR 9 374 0 3 634 356 188 31 0 chr17 6534001 6534065 -88738586 + B3 SINE B2 141 206 -10 3 634 993 262 92 20 chr17 6534224 6534528 -88738123 + MLT1A0 LTR MaLR 40 365 0 4 634 2401 92 3 0 chr17 6534542 6534859 -88737792 + ORR1A2 LTR MaLR 2 319 -8 4 634 284 176 18 18 chr17 6536332 6536398 -88736253 + BC1_Mm scRNA scRNA 5 70 -13 4 634 1413 62 17 0 chr17 6537252 6537429 -88735222 + B2_Mm2 SINE B2 2 181 -14 4 634 529 251 82 64 chr17 6538190 6538421 -88734230 - B4A SINE B4 -20 272 2 4 634 183 329 61 0 chr17 6538589 6538671 -88733980 + MIRb SINE MIR 90 176 -92 4 634 1143 74 0 7 chr17 6538934 6539083 -88733568 - B1_Mus1 SINE Alu 0 148 1 4 634 369 301 69 17 chr17 6539128 6539265 -88733386 + MLT1A0 LTR MaLR 241 373 -17 4 634 318 336 214 0 chr17 6539456 6539676 -88732975 + L1M5 LINE L1 4694 4960 -1186 4 634 252 0 0 0 chr17 6539738 6539766 -88732885 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 4 634 801 104 92 46 chr17 6539766 6539897 -88732754 - B1_Mus1 SINE Alu -9 139 3 5 634 225 139 0 0 chr17 6539919 6539962 -88732689 + (T)n Simple_repeat Simple_repeat 1 43 0 5 634 1193 68 0 13 chr17 6539962 6540111 -88732540 - B1_Mus1 SINE Alu 0 148 2 5 634 438 106 0 29 chr17 6540167 6540235 -88732416 + B1_Mur1 SINE Alu 83 148 -1 5 634 1705 234 80 0 chr17 6540274 6540662 -88731989 - MTD LTR MaLR 0 419 1 5 634 1544 173 136 3 chr17 6540841 6540951 -88731700 - ORR1D1 LTR MaLR 0 374 228 5 634 212 0 36 0 chr17 6540951 6540979 -88731672 + (CAGG)n Simple_repeat Simple_repeat 3 31 0 5 634 1544 173 136 3 chr17 6540979 6541198 -88731453 - ORR1D1 LTR MaLR -147 227 1 5 634 325 276 30 101 chr17 6543422 6543446 -88729205 + CYRA11_Mm Unknown Y-chromosome 153 304 -308 5 634 750 132 0 79 chr17 6543446 6543586 -88729065 - URR1B DNA MER1_type -4 221 93 5 634 276 349 47 0 chr17 6544245 6544351 -88728300 - PB1 SINE Alu -16 111 1 5 634 331 212 0 15 chr17 6545157 6545224 -88727427 - Charlie12 DNA MER1_type -5 2868 2803 6 634 231 312 162 11 chr17 6545349 6545540 -88727111 - MER33 DNA MER1_type -2 322 103 6 634 206 220 0 35 chr17 6548004 6548089 -88724562 + (TCCA)n Simple_repeat Simple_repeat 1 82 0 6 634 293 269 34 0 chr17 6548154 6548334 -88724317 + (TCCA)n Simple_repeat Simple_repeat 1 186 0 6 634 358 185 112 69 chr17 6549617 6549733 -88722918 + B1F SINE Alu 9 129 -20 6 634 587 219 6 17 chr17 6549736 6549917 -88722734 + GA-rich Low_complexity Low_complexity 2 180 0 6 634 1176 68 0 0 chr17 6550363 6550510 -88722141 + B1_Mm SINE Alu 1 147 0 6 634 1695 31 0 0 chr17 6550660 6550852 -88721799 + B2_Mm1a SINE B2 1 192 -1 6 634 521 273 18 47 chr17 6551038 6551207 -88721444 + RSINE1 SINE B4 2 165 0 6 634 1146 168 54 0 chr17 6551223 6551426 -88721225 + B3 SINE B2 3 216 0 6 634 550 281 97 15 chr17 6552237 6552443 -88720208 - ID_B1 SINE B4 0 224 2 7 634 1104 203 30 0 chr17 6553231 6553433 -88719218 + B3 SINE B2 4 211 -5 7 79 1527 168 75 48 chr17 6553464 6553863 -88718788 - RMER17C LTR ERVK 0 410 1 7 635 203 176 0 0 chr17 6554301 6554335 -88718316 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 635 310 202 68 45 chr17 6554336 6554424 -88718227 - B2_Mm2 SINE B2 -8 187 98 7 635 271 205 132 33 chr17 6554558 6554649 -88718002 + L1M3b LINE L1 302 401 -5880 7 635 257 242 25 168 chr17 6554668 6554787 -88717864 + MLT1C LTR MaLR 163 264 -203 7 635 1133 225 81 94 chr17 6555092 6555495 -88717156 + MTE2a LTR MaLR 3 405 -14 7 635 181 193 66 66 chr17 6555603 6555664 -88716987 + L2c LINE L2 3266 3326 -61 7 635 318 236 0 30 chr17 6555820 6556094 -88716557 + G-rich Low_complexity Low_complexity 1 265 0 7 635 181 197 0 29 chr17 6556146 6556214 -88716437 + G-rich Low_complexity Low_complexity 3 68 0 7 635 300 289 65 78 chr17 6556225 6556379 -88716272 + HAL1-3A_ME LINE L1 2284 2435 -423 8 635 213 215 0 31 chr17 6556292 6556388 -88716263 + G-rich Low_complexity Low_complexity 1 93 0 8 635 351 215 0 34 chr17 6556427 6556605 -88716046 + G-rich Low_complexity Low_complexity 1 172 0 8 635 402 218 0 62 chr17 6556738 6557049 -88715602 + G-rich Low_complexity Low_complexity 1 291 0 8 635 246 279 113 35 chr17 6557665 6557780 -88714871 - RSINE1 SINE B4 -35 130 7 8 635 1128 44 0 7 chr17 6557928 6558064 -88714587 + B1_Mus2 SINE Alu 1 135 -12 8 635 335 23 0 22 chr17 6558065 6558110 -88714541 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 8 635 587 203 6 28 chr17 6558476 6558658 -88713993 + (CATA)n Simple_repeat Simple_repeat 2 179 0 8 635 1048 226 15 5 chr17 6558694 6558894 -88713757 - ID_B1 SINE B4 -4 220 19 8 635 659 198 104 60 chr17 6559402 6559585 -88713066 + B3A SINE B2 2 192 -6 8 635 463 300 132 35 chr17 6559814 6560042 -88712609 - B4A SINE B4 -42 250 1 8 635 527 252 30 68 chr17 6560665 6560797 -88711854 - RSINE1 SINE B4 -37 128 2 9 635 199 133 22 22 chr17 6561472 6561518 -88711133 + CT-rich Low_complexity Low_complexity 5 50 0 9 635 293 243 68 0 chr17 6561528 6561602 -88711049 - ID2 SINE ID 0 83 5 9 635 1211 212 96 32 chr17 6562005 6562287 -88710364 + ORR1E LTR MaLR 5 304 -55 9 635 431 175 28 85 chr17 6562293 6562399 -88710252 - PB1D9 SINE Alu -12 108 9 9 635 474 255 19 0 chr17 6562484 6562590 -88710061 - RSINE1 SINE B4 -52 113 6 9 635 386 183 0 0 chr17 6563184 6563244 -88709407 + RMER6A LTR ERVK 683 742 -14 9 635 370 279 116 9 chr17 6563657 6563769 -88708882 - B1F1 SINE Alu -2 147 24 9 635 429 284 103 0 chr17 6563787 6563903 -88708748 - B3 SINE B2 -8 208 81 9 635 474 220 103 109 chr17 6563934 6564115 -88708536 - RMER30 DNA MER1_type -25 177 58 9 635 1587 204 102 8 chr17 6564115 6564496 -88708155 - MTD LTR MaLR 0 419 3 1 635 474 263 20 145 chr17 6564496 6564553 -88708098 - RMER30 DNA MER1_type -145 57 3 9 635 238 143 0 61 chr17 6564762 6564844 -88707807 + G-rich Low_complexity Low_complexity 1 77 0 1 635 1397 86 21 0 chr17 6564899 6565086 -88707565 + B2_Mm1t SINE B2 3 193 0 1 635 510 222 0 69 chr17 6566087 6566203 -88706448 + PB1D10 SINE Alu 3 110 -7 1 635 422 321 98 25 chr17 6566266 6566429 -88706222 + B4 SINE B4 55 229 -63 1 635 561 226 84 57 chr17 6566442 6566628 -88706023 + B3A SINE B2 2 210 -6 1 635 227 255 0 0 chr17 6566682 6566733 -88705918 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 635 868 183 7 0 chr17 6566787 6566929 -88705722 - B1_Mur4 SINE Alu -6 144 2 1 635 301 277 8 112 chr17 6567752 6567886 -88704765 + PB1 SINE Alu 1 120 -7 1 635 776 256 73 30 chr17 6568076 6568310 -88704341 + B4A SINE B4 48 291 -1 1 635 938 180 28 0 chr17 6568575 6568753 -88703898 + MTC LTR MaLR 1 183 -238 1 635 1053 116 188 0 chr17 6568789 6568970 -88703681 + URR1B DNA MER1_type 1 215 -10 1 635 4683 139 68 41 chr17 6569600 6570268 -88702383 + Lx5 LINE L1 6164 6799 -251 1 635 2965 68 200 9 chr17 6570268 6570698 -88701953 + RLTR1B LTR ERV1 1 512 0 1 635 4683 139 68 41 chr17 6570698 6570892 -88701759 + Lx5 LINE L1 6800 7050 0 1 635 1213 68 0 0 chr17 6570915 6571062 -88701589 + B1_Mm SINE Alu 1 147 0 1 635 198 0 0 0 chr17 6571062 6571084 -88701567 + (A)n Simple_repeat Simple_repeat 1 22 0 1 635 201 74 0 0 chr17 6571210 6571237 -88701414 + (T)n Simple_repeat Simple_repeat 1 27 0 1 635 362 292 20 105 chr17 6572282 6572316 -88700335 + MT2B LTR ERVL 139 159 -442 1 635 817 193 14 14 chr17 6572316 6572463 -88700188 + B1_Mus2 SINE Alu 1 147 0 1 635 1106 188 11 0 chr17 6572470 6572651 -88700000 + B3 SINE B2 9 191 -25 1 635 531 217 68 30 chr17 6572830 6572963 -88699688 + ID_B1 SINE B4 86 223 -1 1 635 657 226 75 0 chr17 6573077 6573210 -88699441 + B1_Mur1 SINE Alu 2 144 -5 1 635 1128 261 32 117 chr17 6573679 6574091 -88698560 + MTE2a LTR MaLR 1 377 -2 1 635 525 221 0 37 chr17 6574382 6574490 -88698161 + B1_Mur2 SINE Alu 3 106 -43 1 635 340 291 15 59 chr17 6574490 6574516 -88698135 + ID_B1 SINE B4 84 211 -13 1 635 207 0 0 0 chr17 6574516 6574539 -88698112 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1 635 979 188 56 0 chr17 6574619 6574816 -88697835 - B3 SINE B2 -2 214 7 1 635 3688 58 31 6 chr17 6574860 6575344 -88697307 - LTRIS2 LTR ERV1 0 564 69 1 635 996 200 51 0 chr17 6575344 6575579 -88697072 - RLTR1B-int LTR ERV1 -26 5037 4791 1 635 1186 79 78 11 chr17 6575665 6575688 -88696963 - B2_Mm1t SINE B2 -1 192 162 1 635 243 0 0 0 chr17 6575688 6575715 -88696936 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 1 635 1186 79 78 11 chr17 6575715 6575870 -88696781 - B2_Mm1t SINE B2 -32 161 3 1 635 9255 141 125 45 chr17 6575888 6578561 -88694090 - RLTR1B-int LTR ERV1 -917 4146 760 1 635 4120 150 39 20 chr17 6578552 6579300 -88693351 - RMER16-int LTR ERVK -3962 1444 683 1 635 909 152 61 17 chr17 6579285 6579466 -88693185 - RMER16-int LTR ERVK -5076 330 142 1 635 1108 115 24 49 chr17 6579811 6580079 -88692572 - RLTR1B-int LTR ERV1 -3006 293 60 1 635 229 0 0 0 chr17 6580205 6580225 -88692426 - RLTR6_Mm LTR ERV1 -15 639 620 1 635 3738 62 20 6 chr17 6580225 6580714 -88691937 - LTRIS2 LTR ERV1 0 564 69 1 635 25 0 0 0 chr17 6580842 6580867 -88691784 + AT_rich Low_complexity Low_complexity 1 25 0 1 635 1119 206 5 9 chr17 6580869 6581085 -88691566 - B3 SINE B2 0 216 2 1 635 204 97 0 0 chr17 6582281 6582312 -88690339 + (A)n Simple_repeat Simple_repeat 1 31 0 1 635 699 69 0 0 chr17 6582637 6582739 -88689912 + (TATG)n Simple_repeat Simple_repeat 1 102 0 1 635 1156 167 88 0 chr17 6582840 6583044 -88689607 - URR1A DNA MER1_type 0 226 5 1 635 1064 114 6 0 chr17 6583107 6583274 -88689377 + (GAA)n Simple_repeat Simple_repeat 3 170 0 1 635 1272 72 0 4 chr17 6583276 6583512 -88689139 + (GGA)n Simple_repeat Simple_repeat 1 235 0 1 635 726 122 0 37 chr17 6583520 6583612 -88689039 + polypurine Low_complexity Low_complexity 1 91 0 1 635 1167 84 0 0 chr17 6583612 6583790 -88688861 + (GGA)n Simple_repeat Simple_repeat 3 180 0 1 635 726 122 0 37 chr17 6583790 6583817 -88688834 + polypurine Low_complexity Low_complexity 92 115 0 1 635 1202 73 6 0 chr17 6583817 6583996 -88688655 + (GGA)n Simple_repeat Simple_repeat 1 180 0 1 635 726 122 0 37 chr17 6583996 6584062 -88688589 + polypurine Low_complexity Low_complexity 116 180 0 1 635 1215 79 0 0 chr17 6584065 6584357 -88688294 + (GGA)n Simple_repeat Simple_repeat 1 292 0 1 635 687 342 75 30 chr17 6584434 6584699 -88687952 + B4 SINE B4 14 290 -2 1 635 291 71 0 0 chr17 6584729 6584771 -88687880 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 635 750 244 98 0 chr17 6584799 6584963 -88687688 + B3A SINE B2 19 198 0 1 635 632 315 60 49 chr17 6585693 6585793 -88686858 - Charlie4a DNA MER1_type -144 364 253 1 635 4574 30 22 9 chr17 6585793 6586337 -88686314 + L1Md_F2 LINE L1 6031 6581 -1 1 635 632 315 60 49 chr17 6586337 6586520 -88686131 - Charlie4a DNA MER1_type -256 252 78 1 635 932 266 5 18 chr17 6586520 6586738 -88685913 + B3 SINE B2 1 215 -1 1 635 403 241 278 63 chr17 6587124 6587312 -88685339 + B4 SINE B4 10 247 -45 1 635 1358 96 43 0 chr17 6587312 6587499 -88685152 + B2_Mm2 SINE B2 1 195 0 1 635 403 253 169 90 chr17 6587499 6587545 -88685106 + B4 SINE B4 248 288 -4 1 635 2510 137 29 41 chr17 6588769 6589187 -88683464 + MTC LTR MaLR 1 413 -8 1 635 217 255 20 0 chr17 6590370 6590421 -88682230 + PB1 SINE Alu 2 53 -74 1 635 309 187 133 0 chr17 6590915 6590990 -88681661 + B4A SINE B4 1 85 -207 1 635 3089 20 0 6 chr17 6591536 6591884 -88680767 + ORR1A0 LTR MaLR 1 346 0 1 635 2557 112 66 8 chr17 6591884 6592279 -88680372 + MTC LTR MaLR 4 421 0 1 635 433 244 221 76 chr17 6592999 6593248 -88679403 - MTE2a LTR MaLR -9 370 86 1 635 595 217 26 0 chr17 6593249 6593364 -88679287 + B1_Mur1 SINE Alu 2 119 -30 1 635 3620 94 29 14 chr17 6593373 6593891 -88678760 + Lx4A LINE L1 6533 7058 0 1 635 369 308 8 17 chr17 6594055 6594174 -88678477 - MER44D DNA MER2_type -587 118 1 1 635 772 244 76 184 chr17 6594542 6594965 -88677686 - MTE2a LTR MaLR 0 379 3 1 635 214 309 54 3 chr17 6596325 6596404 -88676247 - MIR SINE MIR -99 169 83 1 635 631 221 14 22 chr17 6596606 6596745 -88675906 + B1_Mur1 SINE Alu 5 142 -7 1 635 1028 117 0 6 chr17 6597056 6597220 -88675431 + (TTTC)n Simple_repeat Simple_repeat 3 165 0 1 635 658 164 0 0 chr17 6597220 6597324 -88675327 - B1_Mur3 SINE Alu -12 137 34 1 635 348 148 0 0 chr17 6598146 6598207 -88674444 + (TCC)n Simple_repeat Simple_repeat 1 61 0 1 635 610 293 62 114 chr17 6598356 6598397 -88674254 + B4A SINE B4 1 38 -254 1 635 2512 83 6 0 chr17 6598397 6598722 -88673929 - ORR1A2 LTR MaLR 0 327 1 1 635 610 293 62 114 chr17 6598722 6598988 -88673663 + B4A SINE B4 39 292 0 1 635 309 220 208 17 chr17 6599351 6599471 -88673180 - MLT1A0 LTR MaLR -4 361 219 1 635 337 175 180 30 chr17 6599479 6599579 -88673072 - PB1D10 SINE Alu 0 117 3 1 635 424 146 0 43 chr17 6599642 6599735 -88672916 - L1Md_F2 LINE L1 -2 6580 6492 1 635 516 226 165 68 chr17 6599742 6599918 -88672733 - B3A SINE B2 -2 193 1 1 635 1209 41 0 20 chr17 6600275 6600423 -88672228 - B1_Mm SINE Alu 0 147 3 1 635 186 284 152 29 chr17 6603181 6603319 -88669332 + MIR3 SINE MIR 42 196 -12 1 635 1967 189 51 48 chr17 6603474 6603766 -88668885 - MTC LTR MaLR -8 413 106 1 635 1379 82 5 26 chr17 6603766 6603955 -88668696 + B2_Mm2 SINE B2 2 186 -9 1 635 1967 189 51 48 chr17 6603955 6603977 -88668674 - MTC LTR MaLR -316 105 88 1 635 1267 111 16 5 chr17 6603977 6604168 -88668483 + B2_Mm1t SINE B2 1 193 0 1 635 1967 189 51 48 chr17 6604168 6604264 -88668387 - MTC LTR MaLR -334 87 3 1 635 381 184 143 42 chr17 6604681 6604800 -88667851 - MTEb LTR MaLR -38 341 211 1 635 720 268 158 16 chr17 6604789 6605036 -88667615 + MTEa LTR MaLR 69 350 -29 1 635 578 233 23 70 chr17 6608137 6608308 -88664343 - RSINE1 SINE B4 0 165 3 1 635 906 305 25 35 chr17 6608863 6609145 -88663506 - B4A SINE B4 -7 285 7 1 635 2329 56 68 5 chr17 6609293 6609614 -88663037 + ORR1A2 LTR MaLR 1 316 -11 1 635 242 236 54 27 chr17 6609614 6609688 -88662963 - RLTR9E LTR ERVK 0 409 334 1 635 342 253 33 11 chr17 6609705 6609797 -88662854 + ORR1E LTR MaLR 38 131 -228 1 635 193 328 202 6 chr17 6611271 6611449 -88661202 - L2 LINE L2 -858 2561 2349 1 635 506 268 132 118 chr17 6612662 6612950 -88659701 - B4A SINE B4 0 292 1 1 635 381 117 0 0 chr17 6612990 6613050 -88659601 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 635 320 212 103 23 chr17 6613056 6613143 -88659508 - B4A SINE B4 -130 162 69 1 635 605 209 29 43 chr17 6613317 6613457 -88659194 - B1_Mur2 SINE Alu -10 139 2 1 635 2244 113 71 103 chr17 6614332 6614510 -88658141 + MTC LTR MaLR 1 208 -213 1 635 2522 27 0 10 chr17 6614510 6614809 -88657842 + L1Md_F3 LINE L1 6277 6572 -12 1 635 2244 113 71 103 chr17 6614809 6615065 -88657586 + MTC LTR MaLR 209 421 0 1 635 471 271 40 43 chr17 6615065 6615343 -88657308 + RMER5 LTR ERV1 225 523 -11 1 635 745 221 22 45 chr17 6616059 6616278 -88656373 - B3A SINE B2 -2 214 5 1 635 180 0 0 0 chr17 6617292 6617312 -88655339 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1 635 381 93 0 0 chr17 6617344 6617398 -88655253 + (TCC)n Simple_repeat Simple_repeat 2 55 0 1 635 652 315 46 7 chr17 6617765 6618046 -88654605 - B4A SINE B4 0 292 1 1 635 210 300 0 0 chr17 6618733 6618783 -88653868 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 635 351 313 65 112 chr17 6619005 6619372 -88653279 - MLT2B4 LTR ERVL -65 349 5 2 635 221 299 14 43 chr17 6619446 6619516 -88653135 - MIR SINE MIR -108 154 87 2 635 7832 48 6 5 chr17 6619786 6620743 -88651908 - RLTR13A2 LTR ERVK 0 958 1 2 635 886 273 210 23 chr17 6620813 6621502 -88651149 + L1M4c LINE L1 827 1644 -4740 2 635 232 190 288 12 chr17 6621517 6621597 -88651054 + PB1D10 SINE Alu 4 105 -12 2 635 232 309 135 5 chr17 6621718 6621926 -88650725 + L1M4c LINE L1 1802 2036 -4348 2 635 297 182 0 68 chr17 6621934 6621993 -88650658 + ID2 SINE ID 20 74 -9 2 635 231 125 0 0 chr17 6622013 6622053 -88650598 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 635 367 288 37 99 chr17 6622168 6622330 -88650321 + L1M4c LINE L1 2298 2449 -3935 2 635 590 224 126 63 chr17 6622330 6622601 -88650050 + B4A SINE B4 1 288 -4 2 635 189 0 0 0 chr17 6622779 6622800 -88649851 + (T)n Simple_repeat Simple_repeat 1 21 0 2 635 397 93 7 0 chr17 6622800 6622870 -88649781 - B1_Mm SINE Alu 0 147 76 2 635 909 58 74 0 chr17 6622869 6622990 -88649661 + B1_Mus1 SINE Alu 13 142 -6 2 635 848 37 9 0 chr17 6622992 6623100 -88649551 + (GAA)n Simple_repeat Simple_repeat 2 110 0 2 635 762 97 30 68 chr17 6623105 6623204 -88649447 - RMER15 LTR ERVL -421 154 62 2 635 1015 99 246 11 chr17 6623204 6623387 -88649264 - URR1A DNA MER1_type 0 226 1 2 635 762 97 30 68 chr17 6623387 6623420 -88649231 - RMER15 LTR ERVL -514 61 27 2 635 216 344 160 24 chr17 6623425 6623550 -88649101 + RSINE1 SINE B4 14 155 -10 2 635 315 237 56 63 chr17 6623556 6623682 -88648969 + L1MB3 LINE L1 5815 5939 -244 2 635 772 246 38 80 chr17 6624653 6624728 -88647923 - B4 SINE B4 -8 284 218 2 635 219 36 0 0 chr17 6624728 6624756 -88647895 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 635 772 246 38 80 chr17 6624756 6624967 -88647684 - B4 SINE B4 -75 217 10 2 635 541 208 20 4 chr17 6625262 6625377 -88647274 - B1_Mur1 SINE Alu 0 149 27 2 635 277 341 108 23 chr17 6625273 6625402 -88647249 - B4 SINE B4 -75 217 78 2 635 204 135 0 0 chr17 6626239 6626276 -88646375 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 2 635 241 286 0 87 chr17 6626996 6627088 -88645563 - B3A SINE B2 -1 197 114 2 635 618 284 122 8 chr17 6627058 6627296 -88645355 - B4A SINE B4 -22 270 6 2 635 304 286 212 29 chr17 6627364 6627501 -88645150 - RSINE1 SINE B4 -1 164 3 2 635 1580 37 16 0 chr17 6628238 6628426 -88644225 + B2_Mm1a SINE B2 2 192 -1 2 635 189 229 0 0 chr17 6628621 6628669 -88643982 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 635 1262 34 0 0 chr17 6628980 6629127 -88643524 + B1_Mus1 SINE Alu 2 148 0 2 635 201 74 0 0 chr17 6629128 6629155 -88643496 + (GAA)n Simple_repeat Simple_repeat 2 28 0 2 635 523 332 28 47 chr17 6629300 6629512 -88643139 - MIRb SINE MIR -36 232 25 2 635 203 0 37 0 chr17 6630148 6630175 -88642476 + (TGGGGG)n Simple_repeat Simple_repeat 3 30 0 2 635 347 333 86 25 chr17 6630412 6630609 -88642042 - B4A SINE B4 -8 284 76 2 635 1263 64 94 0 chr17 6630849 6631020 -88641631 - B2_Mm2 SINE B2 -4 191 5 2 635 473 231 146 30 chr17 6631053 6631218 -88641433 + B3A SINE B2 3 186 -9 2 635 222 100 0 0 chr17 6633806 6633824 -88638827 + (T)n Simple_repeat Simple_repeat 1 18 0 2 635 1062 101 0 51 chr17 6633824 6633980 -88638671 - B1_Mus1 SINE Alu 0 148 1 2 635 222 100 0 0 chr17 6633980 6634001 -88638650 + (T)n Simple_repeat Simple_repeat 1 21 0 2 635 8420 20 0 2 chr17 6634518 6635449 -88637202 + RLTR13B3 LTR ERVK 1 929 0 2 635 644 192 109 38 chr17 6637125 6637309 -88635342 + B3A SINE B2 1 197 -1 2 635 284 264 85 5 chr17 6637743 6637875 -88634776 + B4 SINE B4 3 152 -140 2 635 267 270 175 0 chr17 6638128 6638254 -88634397 + MIR SINE MIR 20 167 -95 2 635 186 247 195 0 chr17 6638719 6638796 -88633855 - MIR3 SINE MIR -27 181 90 2 635 201 39 0 0 chr17 6639529 6639555 -88633096 + (TTTTTG)n Simple_repeat Simple_repeat 6 31 0 2 635 226 276 13 0 chr17 6639677 6639829 -88632822 + (TG)n Simple_repeat Simple_repeat 2 155 0 2 635 571 290 79 72 chr17 6639889 6639971 -88632680 - B4A SINE B4 0 292 211 2 635 495 305 6 19 chr17 6639971 6640128 -88632523 - RSINE1 SINE B4 -8 157 3 2 635 571 290 79 72 chr17 6640128 6640335 -88632316 - B4A SINE B4 -82 210 1 2 635 1103 201 118 45 chr17 6640449 6640736 -88631915 - ORR1B2 LTR MaLR -8 359 52 2 635 972 96 30 0 chr17 6640748 6640883 -88631768 + B1_Mur4 SINE Alu 1 139 -11 2 635 189 0 0 0 chr17 6642003 6642024 -88630627 + (CAGA)n Simple_repeat Simple_repeat 2 22 0 2 635 998 203 13 88 chr17 6643306 6643333 -88629318 + B4A SINE B4 71 96 -196 2 635 797 158 0 0 chr17 6643333 6643447 -88629204 + PB1D9 SINE Alu 1 114 -6 2 635 998 203 13 88 chr17 6643447 6643657 -88628994 + B4A SINE B4 97 290 -2 2 635 25 0 0 0 chr17 6644639 6644664 -88627987 + AT_rich Low_complexity Low_complexity 1 25 0 2 635 523 288 69 79 chr17 6646636 6646953 -88625698 - ORR1E LTR MaLR -8 351 38 2 635 2329 56 68 5 chr17 6647012 6647334 -88625317 - ORR1A2 LTR MaLR -10 317 1 2 635 909 301 25 35 chr17 6647482 6647764 -88624887 + B4A SINE B4 7 285 -7 2 635 578 233 23 70 chr17 6648319 6648490 -88624161 + RSINE1 SINE B4 3 165 0 2 635 720 268 158 16 chr17 6651593 6651840 -88620811 - MTEa LTR MaLR -29 350 69 2 635 381 184 143 42 chr17 6651829 6651948 -88620703 + MTEb LTR MaLR 211 341 -38 2 635 1967 189 51 48 chr17 6652366 6652462 -88620189 + MTC LTR MaLR 1 86 -335 2 635 1267 111 16 5 chr17 6652462 6652653 -88619998 - B2_Mm1t SINE B2 0 193 1 2 635 1967 189 51 48 chr17 6652653 6652675 -88619976 + MTC LTR MaLR 87 103 -318 2 635 1362 87 5 26 chr17 6652675 6652864 -88619787 - B2_Mm2 SINE B2 -9 186 2 2 635 1967 189 51 48 chr17 6652864 6653156 -88619495 + MTC LTR MaLR 104 412 -9 2 635 183 276 152 29 chr17 6653311 6653449 -88619202 - MIR3 SINE MIR -12 196 42 2 635 1215 41 0 14 chr17 6655436 6655583 -88617068 + B1_Mm SINE Alu 3 147 0 2 635 485 226 165 68 chr17 6655936 6656112 -88616539 + B3A SINE B2 1 193 -2 2 635 568 49 0 12 chr17 6656120 6656202 -88616449 + L1_Mus2 LINE L1 6486 6566 0 2 635 318 186 180 30 chr17 6656275 6656375 -88616276 + PB1D10 SINE Alu 3 117 0 2 635 309 220 208 17 chr17 6656383 6656503 -88616148 + MLT1A0 LTR MaLR 219 361 -4 2 635 610 293 62 114 chr17 6656870 6657136 -88615515 - B4A SINE B4 0 292 39 2 635 2498 83 6 0 chr17 6657136 6657461 -88615190 + ORR1A2 LTR MaLR 1 327 0 2 635 610 293 62 114 chr17 6657461 6657502 -88615149 - B4A SINE B4 -254 38 1 2 635 348 148 0 0 chr17 6657651 6657712 -88614939 + (GGA)n Simple_repeat Simple_repeat 1 61 0 2 635 678 160 0 0 chr17 6658534 6658640 -88614011 + B1_Mur3 SINE Alu 34 139 -10 2 635 1349 61 0 6 chr17 6658640 6658821 -88613830 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2 635 620 221 14 22 chr17 6659133 6659272 -88613379 - B1_Mur1 SINE Alu -7 142 5 2 635 214 309 54 3 chr17 6659475 6659554 -88613097 + MIR SINE MIR 83 169 -99 2 635 688 255 76 184 chr17 6660899 6661322 -88611329 + MTE2a LTR MaLR 3 379 0 2 635 384 308 8 17 chr17 6661690 6661809 -88610842 + MER44D DNA MER2_type 1 118 -587 2 635 22 35 0 0 chr17 6661947 6661976 -88610675 + AT_rich Low_complexity Low_complexity 1 29 0 2 635 3598 94 13 21 chr17 6661976 6662506 -88610145 - Lx4A LINE L1 0 7058 6533 2 635 571 226 26 0 chr17 6662515 6662630 -88610021 - B1_Mur1 SINE Alu -30 119 2 2 635 465 235 221 76 chr17 6662631 6662880 -88609771 + MTE2a LTR MaLR 86 370 -9 2 635 2492 120 66 8 chr17 6663600 6663995 -88608656 - MTC LTR MaLR 0 421 4 2 635 3092 23 0 6 chr17 6663995 6664343 -88608308 - ORR1A0 LTR MaLR 0 346 1 2 635 323 173 133 0 chr17 6664891 6664966 -88607685 - B4A SINE B4 -207 85 1 2 635 217 255 20 0 chr17 6665460 6665511 -88607140 - PB1 SINE Alu -74 53 2 2 635 2504 137 29 45 chr17 6666694 6667114 -88605537 - MTC LTR MaLR -8 413 1 2 635 406 253 169 90 chr17 6668337 6668383 -88604268 - B4 SINE B4 -4 288 249 2 635 1374 91 43 0 chr17 6668383 6668570 -88604081 - B2_Mm2 SINE B2 0 195 1 2 635 406 241 278 63 chr17 6668570 6668758 -88603893 - B4 SINE B4 -44 248 10 2 635 932 266 5 18 chr17 6669144 6669362 -88603289 - B3 SINE B2 -1 215 1 2 635 642 311 59 56 chr17 6669362 6669547 -88603104 + Charlie4a DNA MER1_type 78 252 -256 2 635 4494 35 26 7 chr17 6669547 6670089 -88602562 - L1Md_F2 LINE L1 0 6582 6031 2 635 642 311 59 56 chr17 6670089 6670189 -88602462 + Charlie4a DNA MER1_type 253 364 -144 2 635 730 257 106 0 chr17 6670919 6671098 -88601553 - B3A SINE B2 0 198 1 2 635 246 81 0 0 chr17 6671119 6671156 -88601495 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 635 617 333 71 43 chr17 6671201 6671483 -88601168 - B4 SINE B4 -2 290 1 2 635 539 157 9 0 chr17 6671514 6671622 -88601029 + CT-rich Low_complexity Low_complexity 2 110 0 2 635 1232 72 0 11 chr17 6671623 6671805 -88600846 + (TTC)n Simple_repeat Simple_repeat 1 180 0 2 635 1121 176 88 0 chr17 6671872 6672076 -88600575 + URR1A DNA MER1_type 5 226 0 2 635 462 83 0 0 chr17 6672177 6672249 -88600402 + (CATA)n Simple_repeat Simple_repeat 1 72 0 2 635 1119 206 5 9 chr17 6673801 6674017 -88598634 + B3 SINE B2 2 216 0 2 635 24 0 0 0 chr17 6674019 6674043 -88598608 + AT_rich Low_complexity Low_complexity 1 24 0 2 635 1039 178 56 0 chr17 6674197 6674394 -88598257 + B3 SINE B2 7 214 -2 2 635 546 226 62 62 chr17 6674480 6674626 -88598025 - B1_Mur2 SINE Alu -1 148 3 3 635 1137 258 31 119 chr17 6674912 6675325 -88597326 - MTE2a LTR MaLR -2 377 1 3 635 657 226 75 0 chr17 6675794 6675927 -88596724 - B1_Mur1 SINE Alu -5 144 2 3 635 553 217 68 30 chr17 6676041 6676174 -88596477 - ID_B1 SINE B4 -1 223 86 3 635 1076 190 11 0 chr17 6676356 6676535 -88596116 - B3 SINE B2 -27 189 9 3 635 817 193 14 14 chr17 6676542 6676689 -88595962 - B1_Mus2 SINE Alu 0 147 1 3 635 362 292 20 105 chr17 6676689 6676723 -88595928 - MT2B LTR ERVL -442 159 139 3 635 183 42 0 0 chr17 6677918 6677942 -88594709 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 635 1208 69 0 0 chr17 6677942 6678087 -88594564 - B1_Mm SINE Alu -2 145 1 3 635 5195 137 76 11 chr17 6678110 6678943 -88593708 - Lx5 LINE L1 0 7050 6164 3 635 1054 116 188 0 chr17 6679573 6679754 -88592897 - URR1B DNA MER1_type -10 215 1 3 635 949 185 28 0 chr17 6679789 6679967 -88592684 - MTC LTR MaLR -238 183 1 3 635 755 264 73 30 chr17 6680232 6680466 -88592185 - B4A SINE B4 -1 291 48 3 635 301 277 8 112 chr17 6680656 6680790 -88591861 - PB1 SINE Alu -7 120 1 3 635 868 183 7 0 chr17 6681597 6681739 -88590912 + B1_Mur4 SINE Alu 2 144 -6 3 635 227 255 0 0 chr17 6681793 6681844 -88590807 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 635 561 226 84 57 chr17 6681898 6682084 -88590567 - B3A SINE B2 -6 210 2 3 635 412 327 106 22 chr17 6682097 6682291 -88590360 - B4 SINE B4 -63 229 5 3 635 506 222 0 69 chr17 6682324 6682440 -88590211 - PB1D10 SINE Alu -7 110 3 3 635 1421 70 27 0 chr17 6683443 6683628 -88589023 - B2_Mm1t SINE B2 -1 192 3 3 635 222 146 0 68 chr17 6683683 6683771 -88588880 + C-rich Low_complexity Low_complexity 1 82 0 3 635 313 251 0 28 chr17 6683778 6683850 -88588801 - BC1_Mm scRNA scRNA -10 73 2 3 635 588 14 0 0 chr17 6683850 6683919 -88588732 + (CAGAGA)n Simple_repeat Simple_repeat 4 72 0 3 636 387 290 35 88 chr17 6685496 6685553 -88587098 + RMER30 DNA MER1_type 3 57 -145 3 636 1625 204 102 8 chr17 6685553 6685934 -88586717 + MTD LTR MaLR 3 419 0 3 636 387 290 35 88 chr17 6685934 6686046 -88586605 + RMER30 DNA MER1_type 58 163 -39 3 636 284 118 294 0 chr17 6686061 6686112 -88586539 + Charlie12 DNA MER1_type 2808 2873 0 3 636 489 267 75 0 chr17 6686143 6686263 -88586388 + B3 SINE B2 81 209 -7 3 636 365 229 134 27 chr17 6686280 6686392 -88586259 + B1F SINE Alu 24 147 -2 3 636 386 183 0 0 chr17 6686811 6686871 -88585780 - RMER6A LTR ERVK -14 742 683 3 636 476 255 19 0 chr17 6687465 6687571 -88585080 + RSINE1 SINE B4 6 113 -52 3 636 431 175 28 85 chr17 6687656 6687762 -88584889 + PB1D9 SINE Alu 9 108 -12 3 636 1219 194 106 32 chr17 6687767 6688049 -88584602 - ORR1E LTR MaLR -52 307 5 3 636 269 270 68 0 chr17 6688456 6688530 -88584121 + ID4_ SINE ID 5 83 0 3 636 181 196 18 18 chr17 6688530 6688587 -88584064 + GA-rich Low_complexity Low_complexity 6 62 0 3 636 542 246 30 69 chr17 6689093 6689224 -88583427 + RSINE1 SINE B4 2 127 -38 3 636 494 299 127 35 chr17 6689859 6690088 -88582563 + B4A SINE B4 1 250 -42 3 636 707 219 141 5 chr17 6690317 6690501 -88582150 - B3 SINE B2 -6 210 2 3 636 996 241 15 5 chr17 6691010 6691210 -88581441 + ID_B1 SINE B4 19 220 -4 3 636 605 197 6 27 chr17 6691237 6691420 -88581231 + (TATG)n Simple_repeat Simple_repeat 2 180 0 3 636 335 23 0 22 chr17 6691786 6691831 -88580820 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 3 636 1128 44 0 7 chr17 6691832 6691968 -88580683 - B1_Mus2 SINE Alu -12 135 1 3 636 221 291 114 35 chr17 6692117 6692231 -88580420 + RSINE1 SINE B4 8 130 -35 3 636 393 247 0 29 chr17 6692848 6693164 -88579487 + C-rich Low_complexity Low_complexity 1 306 0 3 636 300 148 14 129 chr17 6693204 6693274 -88579377 - L1MC4a LINE L1 -1792 6090 6029 3 636 181 183 0 32 chr17 6693275 6693337 -88579314 + C-rich Low_complexity Low_complexity 1 60 0 3 636 314 224 0 26 chr17 6693387 6693543 -88579108 + C-rich Low_complexity Low_complexity 1 152 0 3 636 300 148 14 129 chr17 6693583 6693653 -88578998 - L1MC4a LINE L1 -1792 6090 6029 3 636 190 180 0 32 chr17 6693654 6693717 -88578934 + C-rich Low_complexity Low_complexity 5 65 0 3 636 1712 26 0 0 chr17 6693823 6694016 -88578635 - B2_Mm1a SINE B2 0 193 1 3 636 1124 221 81 94 chr17 6694230 6694633 -88578018 - MTE2a LTR MaLR -14 405 3 3 636 256 186 41 41 chr17 6695091 6695164 -88577487 - L1M3b LINE L1 -5907 374 302 3 636 305 202 68 45 chr17 6695298 6695386 -88577265 + B2_Mm2 SINE B2 98 187 -8 3 636 203 176 0 0 chr17 6695387 6695421 -88577230 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 636 1549 169 79 38 chr17 6695855 6696249 -88576402 + RMER17C LTR ERVK 1 410 0 3 636 1139 206 29 0 chr17 6696280 6696484 -88576167 - B3 SINE B2 -5 211 2 3 636 596 276 97 15 chr17 6697269 6697475 -88575176 + ID_B1 SINE B4 2 224 0 3 636 1155 172 54 0 chr17 6698284 6698487 -88574164 - B3 SINE B2 0 216 3 3 636 533 286 18 30 chr17 6698503 6698669 -88573982 - RSINE1 SINE B4 0 165 2 3 636 1201 68 0 0 chr17 6698973 6699120 -88573531 - B1_Mm SINE Alu 0 147 1 3 636 608 213 6 17 chr17 6699566 6699747 -88572904 + CT-rich Low_complexity Low_complexity 2 180 0 3 636 367 185 112 69 chr17 6699750 6699866 -88572785 - B1F SINE Alu -20 129 9 3 636 272 274 34 0 chr17 6701148 6701328 -88571323 + (TGGA)n Simple_repeat Simple_repeat 1 186 0 3 636 336 309 17 23 chr17 6701331 6701388 -88571263 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 3 636 198 71 0 0 chr17 6701388 6701416 -88571235 + (GCTG)n Simple_repeat Simple_repeat 4 31 0 3 636 355 260 12 80 chr17 6701416 6701582 -88571069 + (TGGA)n Simple_repeat Simple_repeat 1 154 0 3 636 206 220 0 35 chr17 6755050 6755135 -88517516 + (TCCA)n Simple_repeat Simple_repeat 1 82 0 3 636 293 269 34 0 chr17 6755200 6755380 -88517271 + (TCCA)n Simple_repeat Simple_repeat 1 186 0 3 636 372 193 54 123 chr17 6756639 6756769 -88515882 + B1F SINE Alu 9 129 -20 3 636 552 228 12 6 chr17 6756772 6756944 -88515707 + GA-rich Low_complexity Low_complexity 2 174 0 3 636 1201 68 0 0 chr17 6757390 6757537 -88515114 + B1_Mm SINE Alu 1 147 0 3 636 519 286 18 47 chr17 6757841 6758010 -88514641 + RSINE1 SINE B4 2 165 0 3 636 1155 172 54 0 chr17 6758026 6758229 -88514422 + B3 SINE B2 3 216 0 3 636 585 281 97 15 chr17 6759039 6759245 -88513406 - ID_B1 SINE B4 0 224 2 3 636 1153 201 29 0 chr17 6760031 6760235 -88512416 + B3 SINE B2 2 211 -5 3 636 1601 172 68 40 chr17 6760266 6760665 -88511986 - RMER17C LTR ERVK 0 410 1 3 636 203 176 0 0 chr17 6761099 6761133 -88511518 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 636 326 191 68 45 chr17 6761134 6761222 -88511429 - B2_Mm2 SINE B2 -8 187 98 3 636 243 179 43 43 chr17 6761356 6761426 -88511225 + L1M3b LINE L1 302 371 -5910 3 636 262 242 25 168 chr17 6761466 6761585 -88511066 + MLT1C LTR MaLR 163 264 -203 3 636 1146 221 81 94 chr17 6761890 6762293 -88510358 + MTE2a LTR MaLR 3 405 -14 3 636 318 236 0 30 chr17 6762618 6762892 -88509759 + G-rich Low_complexity Low_complexity 1 265 0 3 636 231 236 0 66 chr17 6762944 6763223 -88509428 + G-rich Low_complexity Low_complexity 1 260 0 3 636 246 279 113 35 chr17 6763839 6763954 -88508697 - RSINE1 SINE B4 -35 130 7 3 636 1128 44 0 7 chr17 6764102 6764238 -88508413 + B1_Mus2 SINE Alu 1 135 -12 3 636 335 23 0 22 chr17 6764239 6764284 -88508367 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 3 636 587 203 6 28 chr17 6764650 6764832 -88507819 + (CATA)n Simple_repeat Simple_repeat 2 179 0 3 636 1048 226 15 5 chr17 6764868 6765068 -88507583 - ID_B1 SINE B4 -4 220 19 3 636 659 198 104 60 chr17 6765576 6765759 -88506892 + B3A SINE B2 2 192 -6 3 636 463 300 132 35 chr17 6765988 6766216 -88506435 - B4A SINE B4 -42 250 1 3 636 527 252 30 68 chr17 6766839 6766971 -88505680 - RSINE1 SINE B4 -37 128 2 3 636 199 133 22 22 chr17 6767646 6767692 -88504959 + CT-rich Low_complexity Low_complexity 5 50 0 3 636 293 243 68 0 chr17 6767702 6767776 -88504875 - ID2 SINE ID 0 83 5 3 636 1211 212 96 32 chr17 6768179 6768461 -88504190 + ORR1E LTR MaLR 5 304 -55 3 636 431 175 28 85 chr17 6768467 6768573 -88504078 - PB1D9 SINE Alu -12 108 9 3 636 474 255 19 0 chr17 6768658 6768764 -88503887 - RSINE1 SINE B4 -52 113 6 3 636 386 183 0 0 chr17 6769358 6769418 -88503233 + RMER6A LTR ERVK 683 742 -14 3 636 370 279 116 9 chr17 6769831 6769943 -88502708 - B1F1 SINE Alu -2 147 24 3 636 429 284 103 0 chr17 6769961 6770077 -88502574 - B3 SINE B2 -8 208 81 3 636 474 220 103 109 chr17 6770108 6770289 -88502362 - RMER30 DNA MER1_type -25 177 58 3 636 1587 204 102 8 chr17 6770289 6770670 -88501981 - MTD LTR MaLR 0 419 3 3 636 474 263 20 145 chr17 6770670 6770727 -88501924 - RMER30 DNA MER1_type -145 57 3 3 636 238 143 0 61 chr17 6770936 6771018 -88501633 + G-rich Low_complexity Low_complexity 1 77 0 3 636 1397 86 21 0 chr17 6771073 6771260 -88501391 + B2_Mm1t SINE B2 3 193 0 3 636 510 222 0 69 chr17 6772261 6772377 -88500274 + PB1D10 SINE Alu 3 110 -7 3 636 422 321 98 25 chr17 6772440 6772603 -88500048 + B4 SINE B4 55 229 -63 4 636 561 226 84 57 chr17 6772616 6772802 -88499849 + B3A SINE B2 2 210 -6 4 636 227 255 0 0 chr17 6772856 6772907 -88499744 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 636 868 183 7 0 chr17 6772961 6773103 -88499548 - B1_Mur4 SINE Alu -6 144 2 4 636 301 277 8 112 chr17 6773926 6774060 -88498591 + PB1 SINE Alu 1 120 -7 4 636 776 256 73 30 chr17 6774250 6774484 -88498167 + B4A SINE B4 48 291 -1 4 636 938 180 28 0 chr17 6774749 6774927 -88497724 + MTC LTR MaLR 1 183 -238 4 636 1053 116 188 0 chr17 6774963 6775144 -88497507 + URR1B DNA MER1_type 1 215 -10 4 636 4683 139 68 41 chr17 6775774 6776442 -88496209 + Lx5 LINE L1 6164 6799 -251 4 636 2965 68 200 9 chr17 6776442 6776872 -88495779 + RLTR1B LTR ERV1 1 512 0 4 636 4683 139 68 41 chr17 6776872 6777066 -88495585 + Lx5 LINE L1 6800 7050 0 4 636 1213 68 0 0 chr17 6777089 6777236 -88495415 + B1_Mm SINE Alu 1 147 0 4 636 198 0 0 0 chr17 6777236 6777258 -88495393 + (A)n Simple_repeat Simple_repeat 1 22 0 4 636 201 74 0 0 chr17 6777384 6777411 -88495240 + (T)n Simple_repeat Simple_repeat 1 27 0 4 636 362 292 20 105 chr17 6778456 6778490 -88494161 + MT2B LTR ERVL 139 159 -442 4 636 817 193 14 14 chr17 6778490 6778637 -88494014 + B1_Mus2 SINE Alu 1 147 0 4 636 1106 188 11 0 chr17 6778644 6778825 -88493826 + B3 SINE B2 9 191 -25 4 636 531 217 68 30 chr17 6779004 6779137 -88493514 + ID_B1 SINE B4 86 223 -1 4 636 657 226 75 0 chr17 6779251 6779384 -88493267 + B1_Mur1 SINE Alu 2 144 -5 4 636 1128 261 32 117 chr17 6779853 6780265 -88492386 + MTE2a LTR MaLR 1 377 -2 4 636 525 221 0 37 chr17 6780556 6780664 -88491987 + B1_Mur2 SINE Alu 3 106 -43 4 636 340 291 15 59 chr17 6780664 6780690 -88491961 + ID_B1 SINE B4 84 211 -13 4 636 207 0 0 0 chr17 6780690 6780713 -88491938 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 4 636 979 188 56 0 chr17 6780793 6780990 -88491661 - B3 SINE B2 -2 214 7 4 636 3688 58 31 6 chr17 6781034 6781518 -88491133 - LTRIS2 LTR ERV1 0 564 69 4 636 996 200 51 0 chr17 6781518 6781753 -88490898 - RLTR1B-int LTR ERV1 -26 5037 4791 4 636 1186 79 78 11 chr17 6781839 6781862 -88490789 - B2_Mm1t SINE B2 -1 192 162 4 636 243 0 0 0 chr17 6781862 6781889 -88490762 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 4 636 1186 79 78 11 chr17 6781889 6782044 -88490607 - B2_Mm1t SINE B2 -32 161 3 4 636 9255 141 125 45 chr17 6782062 6784735 -88487916 - RLTR1B-int LTR ERV1 -917 4146 760 4 636 4120 150 39 20 chr17 6784726 6785474 -88487177 - RMER16-int LTR ERVK -3962 1444 683 4 636 909 152 61 17 chr17 6785459 6785640 -88487011 - RMER16-int LTR ERVK -5076 330 142 4 636 1108 115 24 49 chr17 6785985 6786253 -88486398 - RLTR1B-int LTR ERV1 -3006 293 60 4 636 229 0 0 0 chr17 6786379 6786399 -88486252 - RLTR6_Mm LTR ERV1 -15 639 620 4 636 3738 62 20 6 chr17 6786399 6786888 -88485763 - LTRIS2 LTR ERV1 0 564 69 4 636 25 0 0 0 chr17 6787016 6787041 -88485610 + AT_rich Low_complexity Low_complexity 1 25 0 4 636 1119 206 5 9 chr17 6787043 6787259 -88485392 - B3 SINE B2 0 216 2 4 636 204 97 0 0 chr17 6788455 6788486 -88484165 + (A)n Simple_repeat Simple_repeat 1 31 0 4 636 699 69 0 0 chr17 6788811 6788913 -88483738 + (TATG)n Simple_repeat Simple_repeat 1 102 0 4 636 1156 167 88 0 chr17 6789014 6789218 -88483433 - URR1A DNA MER1_type 0 226 5 4 636 1064 114 6 0 chr17 6789281 6789448 -88483203 + (GAA)n Simple_repeat Simple_repeat 3 170 0 4 636 460 138 0 17 chr17 6789450 6789469 -88483182 + polypurine Low_complexity Low_complexity 3 21 0 4 636 1272 67 0 0 chr17 6789469 6789649 -88483002 + (GGA)n Simple_repeat Simple_repeat 1 180 0 4 636 460 138 0 17 chr17 6789649 6789739 -88482912 + GA-rich Low_complexity Low_complexity 22 111 0 4 636 1062 100 0 0 chr17 6789739 6789919 -88482732 + (GGA)n Simple_repeat Simple_repeat 1 180 0 4 636 687 342 75 30 chr17 6790003 6790268 -88482383 + B4 SINE B4 14 290 -2 4 636 291 71 0 0 chr17 6790298 6790340 -88482311 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 636 750 244 98 0 chr17 6790368 6790532 -88482119 + B3A SINE B2 19 198 0 4 636 632 315 60 49 chr17 6791262 6791362 -88481289 - Charlie4a DNA MER1_type -144 364 253 4 636 4574 30 22 9 chr17 6791362 6791906 -88480745 + L1Md_F2 LINE L1 6031 6581 -1 4 636 632 315 60 49 chr17 6791906 6792089 -88480562 - Charlie4a DNA MER1_type -256 252 78 4 636 932 266 5 18 chr17 6792089 6792307 -88480344 + B3 SINE B2 1 215 -1 4 636 406 241 278 63 chr17 6792693 6792881 -88479770 + B4 SINE B4 10 248 -44 4 636 1374 91 43 0 chr17 6792881 6793068 -88479583 + B2_Mm2 SINE B2 1 195 0 4 636 406 253 169 90 chr17 6793068 6793114 -88479537 + B4 SINE B4 249 288 -4 4 636 2504 137 29 45 chr17 6794337 6794757 -88477894 + MTC LTR MaLR 1 413 -8 4 636 217 255 20 0 chr17 6795940 6795991 -88476660 + PB1 SINE Alu 2 53 -74 4 636 323 173 133 0 chr17 6796485 6796560 -88476091 + B4A SINE B4 1 85 -207 4 636 3092 23 0 6 chr17 6797108 6797456 -88475195 + ORR1A0 LTR MaLR 1 346 0 4 636 2492 120 66 8 chr17 6797456 6797851 -88474800 + MTC LTR MaLR 4 421 0 4 636 465 235 221 76 chr17 6798571 6798820 -88473831 - MTE2a LTR MaLR -9 370 86 4 636 571 226 26 0 chr17 6798821 6798936 -88473715 + B1_Mur1 SINE Alu 2 119 -30 4 636 3598 94 13 21 chr17 6798945 6799475 -88473176 + Lx4A LINE L1 6533 7058 0 4 636 22 35 0 0 chr17 6799475 6799504 -88473147 + AT_rich Low_complexity Low_complexity 1 29 0 4 636 384 308 8 17 chr17 6799642 6799761 -88472890 - MER44D DNA MER2_type -587 118 1 4 636 688 255 76 184 chr17 6800129 6800552 -88472099 - MTE2a LTR MaLR 0 379 3 4 636 214 309 54 3 chr17 6801897 6801976 -88470675 - MIR SINE MIR -99 169 83 4 636 620 221 14 22 chr17 6802179 6802318 -88470333 + B1_Mur1 SINE Alu 5 142 -7 4 636 1349 61 0 6 chr17 6802630 6802811 -88469840 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 636 678 160 0 0 chr17 6802811 6802917 -88469734 - B1_Mur3 SINE Alu -10 139 34 4 636 348 148 0 0 chr17 6803739 6803800 -88468851 + (TCC)n Simple_repeat Simple_repeat 1 61 0 4 636 610 293 62 114 chr17 6803949 6803990 -88468661 + B4A SINE B4 1 38 -254 4 636 2498 83 6 0 chr17 6803990 6804315 -88468336 - ORR1A2 LTR MaLR 0 327 1 4 636 610 293 62 114 chr17 6804315 6804581 -88468070 + B4A SINE B4 39 292 0 4 636 309 220 208 17 chr17 6804948 6805068 -88467583 - MLT1A0 LTR MaLR -4 361 219 4 636 318 186 180 30 chr17 6805076 6805176 -88467475 - PB1D10 SINE Alu 0 117 3 4 636 431 161 0 0 chr17 6805236 6805323 -88467328 - L1Md_F2 LINE L1 0 6582 6496 4 636 485 226 165 68 chr17 6805339 6805515 -88467136 - B3A SINE B2 -2 193 1 4 636 1215 41 0 14 chr17 6805868 6806015 -88466636 - B1_Mm SINE Alu 0 147 3 4 636 183 276 152 29 chr17 6808002 6808140 -88464511 + MIR3 SINE MIR 42 196 -12 4 636 1967 189 51 48 chr17 6808295 6808587 -88464064 - MTC LTR MaLR -8 413 106 4 636 1379 82 5 26 chr17 6808587 6808776 -88463875 + B2_Mm2 SINE B2 2 186 -9 4 636 1967 189 51 48 chr17 6808776 6808798 -88463853 - MTC LTR MaLR -316 105 88 4 636 1267 111 16 5 chr17 6808798 6808989 -88463662 + B2_Mm1t SINE B2 1 193 0 4 636 1967 189 51 48 chr17 6808989 6809085 -88463566 - MTC LTR MaLR -334 87 3 4 636 381 184 143 42 chr17 6809502 6809621 -88463030 - MTEb LTR MaLR -38 341 211 4 636 720 268 158 16 chr17 6809610 6809857 -88462794 + MTEa LTR MaLR 69 350 -29 4 636 578 233 23 70 chr17 6812960 6813131 -88459520 - RSINE1 SINE B4 0 165 3 4 636 909 301 25 35 chr17 6813686 6813968 -88458683 - B4A SINE B4 -7 285 7 4 636 2329 56 68 5 chr17 6814116 6814438 -88458213 + ORR1A2 LTR MaLR 1 317 -10 4 636 523 288 69 79 chr17 6814497 6814814 -88457837 + ORR1E LTR MaLR 38 351 -8 4 637 25 0 0 0 chr17 6816786 6816811 -88455840 + AT_rich Low_complexity Low_complexity 1 25 0 4 637 998 203 13 88 chr17 6817793 6818003 -88454648 - B4A SINE B4 -2 290 97 4 637 797 158 0 0 chr17 6818003 6818117 -88454534 - PB1D9 SINE Alu -6 114 1 4 637 998 203 13 88 chr17 6818117 6818144 -88454507 - B4A SINE B4 -196 96 71 4 637 189 0 0 0 chr17 6819426 6819447 -88453204 + (TCTG)n Simple_repeat Simple_repeat 2 22 0 4 637 972 96 30 0 chr17 6820567 6820702 -88451949 - B1_Mur4 SINE Alu -11 139 1 4 637 1103 201 118 45 chr17 6820714 6821001 -88451650 + ORR1B2 LTR MaLR 52 359 -8 4 637 571 290 79 72 chr17 6821115 6821322 -88451329 + B4A SINE B4 1 210 -82 4 637 495 305 6 19 chr17 6821322 6821479 -88451172 + RSINE1 SINE B4 3 157 -8 4 637 571 290 79 72 chr17 6821479 6821561 -88451090 + B4A SINE B4 211 292 0 4 637 226 276 13 0 chr17 6821621 6821773 -88450878 + (CA)n Simple_repeat Simple_repeat 2 155 0 4 637 201 39 0 0 chr17 6821895 6821921 -88450730 + (CAAAAA)n Simple_repeat Simple_repeat 6 31 0 4 637 186 247 195 0 chr17 6822654 6822731 -88449920 + MIR3 SINE MIR 90 181 -27 4 637 267 270 175 0 chr17 6823196 6823322 -88449329 - MIR SINE MIR -95 167 20 4 637 284 264 85 5 chr17 6823575 6823707 -88448944 - B4 SINE B4 -140 152 3 4 637 644 192 109 38 chr17 6824141 6824325 -88448326 - B3A SINE B2 -1 197 1 4 637 8420 20 0 2 chr17 6826001 6826932 -88445719 - RLTR13B3 LTR ERVK 0 929 1 4 637 222 100 0 0 chr17 6827449 6827470 -88445181 + (A)n Simple_repeat Simple_repeat 1 21 0 4 637 1062 101 0 51 chr17 6827470 6827626 -88445025 + B1_Mus1 SINE Alu 1 148 0 4 637 222 100 0 0 chr17 6827626 6827644 -88445007 + (A)n Simple_repeat Simple_repeat 1 18 0 4 637 473 231 146 30 chr17 6830232 6830397 -88442254 - B3A SINE B2 -9 186 3 4 637 1263 64 94 0 chr17 6830430 6830601 -88442050 + B2_Mm2 SINE B2 5 191 -4 5 637 347 333 86 25 chr17 6830841 6831038 -88441613 + B4A SINE B4 76 284 -8 5 637 203 0 37 0 chr17 6831275 6831302 -88441349 + (CCCCCA)n Simple_repeat Simple_repeat 3 30 0 5 637 523 332 28 47 chr17 6831938 6832150 -88440501 + MIRb SINE MIR 25 232 -36 5 637 201 74 0 0 chr17 6832295 6832322 -88440329 + (TTC)n Simple_repeat Simple_repeat 2 28 0 5 637 1262 34 0 0 chr17 6832323 6832470 -88440181 - B1_Mus1 SINE Alu 0 148 2 5 637 189 229 0 0 chr17 6832781 6832829 -88439822 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 637 1580 37 16 0 chr17 6833024 6833212 -88439439 - B2_Mm1a SINE B2 -1 192 2 5 637 304 286 212 29 chr17 6833949 6834086 -88438565 + RSINE1 SINE B4 3 164 -1 5 637 618 284 122 8 chr17 6834154 6834392 -88438259 + B4A SINE B4 6 270 -22 5 637 241 286 0 87 chr17 6834362 6834454 -88438197 + B3A SINE B2 114 197 -1 5 637 204 135 0 0 chr17 6835174 6835211 -88437440 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 5 637 277 341 108 23 chr17 6836048 6836177 -88436474 + B4 SINE B4 78 217 -75 5 637 541 208 20 4 chr17 6836073 6836188 -88436463 + B1_Mur1 SINE Alu 27 149 0 5 637 772 246 38 80 chr17 6836483 6836694 -88435957 + B4 SINE B4 10 217 -75 5 637 219 36 0 0 chr17 6836694 6836722 -88435929 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 5 637 772 246 38 80 chr17 6836722 6836797 -88435854 + B4 SINE B4 218 284 -8 5 637 315 237 56 63 chr17 6837768 6837894 -88434757 - L1MB3 LINE L1 -244 5939 5815 5 637 216 344 160 24 chr17 6837900 6838025 -88434626 - RSINE1 SINE B4 -10 155 14 5 637 762 97 30 68 chr17 6838030 6838063 -88434588 + RMER15 LTR ERVL 27 61 -514 5 637 1015 99 246 11 chr17 6838063 6838246 -88434405 + URR1A DNA MER1_type 1 226 0 5 637 762 97 30 68 chr17 6838246 6838345 -88434306 + RMER15 LTR ERVL 62 154 -421 5 637 848 37 9 0 chr17 6838350 6838458 -88434193 + (TTC)n Simple_repeat Simple_repeat 2 110 0 5 637 909 58 74 0 chr17 6838460 6838581 -88434070 - B1_Mus1 SINE Alu -6 142 13 5 637 397 93 7 0 chr17 6838580 6838650 -88434001 + B1_Mm SINE Alu 76 147 0 5 637 189 0 0 0 chr17 6838650 6838671 -88433980 + (A)n Simple_repeat Simple_repeat 1 21 0 5 637 590 224 126 63 chr17 6838849 6839120 -88433531 - B4A SINE B4 -4 288 1 5 637 367 288 37 99 chr17 6839120 6839282 -88433369 - L1M4c LINE L1 -3935 2449 2298 5 637 231 125 0 0 chr17 6839397 6839437 -88433214 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 637 297 182 0 68 chr17 6839457 6839516 -88433135 - ID2 SINE ID -9 74 20 5 637 232 309 135 5 chr17 6839524 6839732 -88432919 - L1M4c LINE L1 -4348 2036 1802 5 637 232 190 288 12 chr17 6839853 6839933 -88432718 - PB1D10 SINE Alu -12 105 4 5 637 886 273 210 23 chr17 6839948 6840637 -88432014 - L1M4c LINE L1 -4740 1644 827 5 637 7832 48 6 5 chr17 6840707 6841664 -88430987 + RLTR13A2 LTR ERVK 1 958 0 5 637 221 299 14 43 chr17 6841934 6842004 -88430647 + MIR SINE MIR 87 154 -108 5 637 351 313 65 112 chr17 6842078 6842445 -88430206 + MLT2B4 LTR ERVL 5 349 -65 5 637 210 300 0 0 chr17 6842667 6842717 -88429934 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 637 652 315 46 7 chr17 6843404 6843685 -88428966 + B4A SINE B4 1 292 0 5 637 381 93 0 0 chr17 6844052 6844106 -88428545 + (GGA)n Simple_repeat Simple_repeat 2 55 0 5 637 180 0 0 0 chr17 6844138 6844158 -88428493 + (TTA)n Simple_repeat Simple_repeat 2 21 0 5 637 745 221 22 45 chr17 6845172 6845391 -88427260 + B3A SINE B2 5 214 -2 5 637 471 271 40 43 chr17 6846107 6846385 -88426266 - RMER5 LTR ERV1 -11 523 225 5 637 2244 113 71 103 chr17 6846385 6846641 -88426010 - MTC LTR MaLR 0 421 209 5 637 2522 27 0 10 chr17 6846641 6846940 -88425711 - L1Md_F3 LINE L1 -12 6572 6277 5 637 2244 113 71 103 chr17 6846940 6847118 -88425533 - MTC LTR MaLR -213 208 1 5 637 605 209 29 43 chr17 6847993 6848133 -88424518 + B1_Mur2 SINE Alu 2 139 -10 5 637 320 212 103 23 chr17 6848307 6848394 -88424257 + B4A SINE B4 69 162 -130 5 637 381 117 0 0 chr17 6848400 6848460 -88424191 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 637 506 268 132 118 chr17 6848500 6848788 -88423863 + B4A SINE B4 1 292 0 5 637 193 328 202 6 chr17 6850001 6850179 -88422472 + L2 LINE L2 2349 2561 -858 5 637 342 253 33 11 chr17 6851653 6851745 -88420906 - ORR1E LTR MaLR -228 131 38 5 637 242 236 54 27 chr17 6851762 6851836 -88420815 + RLTR9E LTR ERVK 334 409 0 5 637 2329 56 68 5 chr17 6851836 6852157 -88420494 - ORR1A2 LTR MaLR -11 316 1 5 637 906 305 25 35 chr17 6852305 6852587 -88420064 + B4A SINE B4 7 285 -7 5 637 578 233 23 70 chr17 6853142 6853313 -88419338 + RSINE1 SINE B4 3 165 0 5 637 720 268 158 16 chr17 6856414 6856661 -88415990 - MTEa LTR MaLR -29 350 69 5 637 381 184 143 42 chr17 6856650 6856769 -88415882 + MTEb LTR MaLR 211 341 -38 5 637 1967 189 51 48 chr17 6857187 6857283 -88415368 + MTC LTR MaLR 1 86 -335 5 637 1267 111 16 5 chr17 6857283 6857474 -88415177 - B2_Mm1t SINE B2 0 193 1 5 637 1967 189 51 48 chr17 6857474 6857496 -88415155 + MTC LTR MaLR 87 103 -318 5 637 1362 87 5 26 chr17 6857496 6857685 -88414966 - B2_Mm2 SINE B2 -9 186 2 5 637 1967 189 51 48 chr17 6857685 6857977 -88414674 + MTC LTR MaLR 104 412 -9 5 637 186 284 152 29 chr17 6858132 6858270 -88414381 - MIR3 SINE MIR -12 196 42 5 637 1209 41 0 20 chr17 6861028 6861176 -88411475 + B1_Mm SINE Alu 3 147 0 5 637 516 226 165 68 chr17 6861533 6861709 -88410942 + B3A SINE B2 1 193 -2 5 637 424 146 0 43 chr17 6861716 6861809 -88410842 + L1Md_F2 LINE L1 6492 6580 -2 5 637 337 175 180 30 chr17 6861872 6861972 -88410679 + PB1D10 SINE Alu 3 117 0 5 637 309 220 208 17 chr17 6861980 6862100 -88410551 + MLT1A0 LTR MaLR 219 361 -4 5 637 610 293 62 114 chr17 6862463 6862729 -88409922 - B4A SINE B4 0 292 39 5 637 2512 83 6 0 chr17 6862729 6863054 -88409597 + ORR1A2 LTR MaLR 1 327 0 5 637 610 293 62 114 chr17 6863054 6863095 -88409556 - B4A SINE B4 -254 38 1 5 637 348 148 0 0 chr17 6863244 6863305 -88409346 + (GGA)n Simple_repeat Simple_repeat 1 61 0 5 637 658 164 0 0 chr17 6864127 6864231 -88408420 + B1_Mur3 SINE Alu 34 137 -12 5 637 1028 117 0 6 chr17 6864231 6864395 -88408256 + (GAAA)n Simple_repeat Simple_repeat 3 165 0 5 637 631 221 14 22 chr17 6864706 6864845 -88407806 - B1_Mur1 SINE Alu -7 142 5 5 637 214 309 54 3 chr17 6865047 6865126 -88407525 + MIR SINE MIR 83 169 -99 5 637 772 244 76 184 chr17 6866486 6866909 -88405742 + MTE2a LTR MaLR 3 379 0 5 637 369 308 8 17 chr17 6867277 6867396 -88405255 + MER44D DNA MER2_type 1 118 -587 5 637 3620 94 29 14 chr17 6867560 6868078 -88404573 - Lx4A LINE L1 0 7058 6533 5 637 595 217 26 0 chr17 6868087 6868202 -88404449 - B1_Mur1 SINE Alu -30 119 2 5 637 433 244 221 76 chr17 6868203 6868452 -88404199 + MTE2a LTR MaLR 86 370 -9 5 637 2557 112 66 8 chr17 6869172 6869567 -88403084 - MTC LTR MaLR 0 421 4 5 637 3089 20 0 6 chr17 6869567 6869915 -88402736 - ORR1A0 LTR MaLR 0 346 1 5 637 309 187 133 0 chr17 6870461 6870536 -88402115 - B4A SINE B4 -207 85 1 5 637 217 255 20 0 chr17 6871030 6871081 -88401570 - PB1 SINE Alu -74 53 2 5 637 2510 137 29 41 chr17 6871896 6872314 -88400337 - MTC LTR MaLR -8 413 1 5 637 403 253 169 90 chr17 6873538 6873584 -88399067 - B4 SINE B4 -4 288 248 5 637 1358 96 43 0 chr17 6873584 6873771 -88398880 - B2_Mm2 SINE B2 0 195 1 5 637 403 241 278 63 chr17 6873771 6873959 -88398692 - B4 SINE B4 -45 247 10 5 637 932 266 5 18 chr17 6874345 6874563 -88398088 - B3 SINE B2 -1 215 1 5 637 642 311 59 56 chr17 6874563 6874748 -88397903 + Charlie4a DNA MER1_type 78 252 -256 5 637 4507 35 24 7 chr17 6874748 6875291 -88397360 - L1Md_F2 LINE L1 0 6582 6031 5 637 642 311 59 56 chr17 6875291 6875391 -88397260 + Charlie4a DNA MER1_type 253 364 -144 5 637 730 257 106 0 chr17 6876121 6876300 -88396351 - B3A SINE B2 0 198 1 5 637 246 81 0 0 chr17 6876321 6876358 -88396293 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 637 617 333 71 43 chr17 6876403 6876685 -88395966 - B4 SINE B4 -2 290 1 5 637 539 157 9 0 chr17 6876716 6876824 -88395827 + CT-rich Low_complexity Low_complexity 2 110 0 5 637 1232 72 0 11 chr17 6876825 6877007 -88395644 + (TTC)n Simple_repeat Simple_repeat 1 180 0 5 637 1121 176 88 0 chr17 6877074 6877278 -88395373 + URR1A DNA MER1_type 5 226 0 5 637 462 83 0 0 chr17 6877379 6877451 -88395200 + (CATA)n Simple_repeat Simple_repeat 1 72 0 5 637 1119 206 5 9 chr17 6879003 6879219 -88393432 + B3 SINE B2 2 216 0 5 637 24 0 0 0 chr17 6879221 6879245 -88393406 + AT_rich Low_complexity Low_complexity 1 24 0 5 637 1039 178 56 0 chr17 6879399 6879596 -88393055 + B3 SINE B2 7 214 -2 5 637 546 226 62 62 chr17 6879682 6879828 -88392823 - B1_Mur2 SINE Alu -1 148 3 5 637 1137 258 31 119 chr17 6880114 6880527 -88392124 - MTE2a LTR MaLR -2 377 1 5 637 657 226 75 0 chr17 6880996 6881129 -88391522 - B1_Mur1 SINE Alu -5 144 2 5 637 553 217 68 30 chr17 6881243 6881376 -88391275 - ID_B1 SINE B4 -1 223 86 5 637 1076 190 11 0 chr17 6881558 6881737 -88390914 - B3 SINE B2 -27 189 9 5 637 817 193 14 14 chr17 6881744 6881891 -88390760 - B1_Mus2 SINE Alu 0 147 1 5 637 362 292 20 105 chr17 6881891 6881925 -88390726 - MT2B LTR ERVL -442 159 139 5 637 183 42 0 0 chr17 6883120 6883144 -88389507 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 637 1208 69 0 0 chr17 6883144 6883289 -88389362 - B1_Mm SINE Alu -2 145 1 6 637 5195 137 76 11 chr17 6883312 6884145 -88388506 - Lx5 LINE L1 0 7050 6164 6 637 1054 116 188 0 chr17 6884775 6884956 -88387695 - URR1B DNA MER1_type -10 215 1 6 637 949 185 28 0 chr17 6884991 6885169 -88387482 - MTC LTR MaLR -238 183 1 6 637 755 264 73 30 chr17 6885434 6885668 -88386983 - B4A SINE B4 -1 291 48 6 637 301 277 8 112 chr17 6885858 6885992 -88386659 - PB1 SINE Alu -7 120 1 6 637 868 183 7 0 chr17 6886799 6886941 -88385710 + B1_Mur4 SINE Alu 2 144 -6 6 637 227 255 0 0 chr17 6886995 6887046 -88385605 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 637 561 226 84 57 chr17 6887100 6887286 -88385365 - B3A SINE B2 -6 210 2 6 637 412 327 106 22 chr17 6887299 6887493 -88385158 - B4 SINE B4 -63 229 5 6 637 506 222 0 69 chr17 6887526 6887642 -88385009 - PB1D10 SINE Alu -7 110 3 6 637 1418 70 27 0 chr17 6888645 6888830 -88383821 - B2_Mm1t SINE B2 -1 192 3 6 637 222 146 0 68 chr17 6888885 6888973 -88383678 + C-rich Low_complexity Low_complexity 1 82 0 6 637 310 251 0 28 chr17 6888980 6889052 -88383599 - BC1_Mm scRNA scRNA -10 73 2 6 637 588 14 0 0 chr17 6889052 6889121 -88383530 + (CAGAGA)n Simple_repeat Simple_repeat 4 72 0 6 637 390 290 35 88 chr17 6890698 6890755 -88381896 + RMER30 DNA MER1_type 3 57 -145 6 637 1586 204 102 8 chr17 6890755 6891136 -88381515 + MTD LTR MaLR 3 419 0 6 637 390 290 35 88 chr17 6891136 6891248 -88381403 + RMER30 DNA MER1_type 58 163 -39 6 637 284 118 294 0 chr17 6891263 6891314 -88381337 + Charlie12 DNA MER1_type 2808 2873 0 6 637 488 267 75 0 chr17 6891345 6891465 -88381186 + B3 SINE B2 81 209 -7 6 637 360 229 134 27 chr17 6891482 6891594 -88381057 + B1F SINE Alu 24 147 -2 6 637 384 183 0 0 chr17 6892013 6892073 -88380578 - RMER6A LTR ERVK -14 742 683 6 637 471 255 19 0 chr17 6892667 6892773 -88379878 + RSINE1 SINE B4 6 113 -52 6 637 422 175 28 85 chr17 6892858 6892964 -88379687 + PB1D9 SINE Alu 9 108 -12 6 637 1213 194 106 32 chr17 6892969 6893251 -88379400 - ORR1E LTR MaLR -52 307 5 6 637 258 270 68 0 chr17 6893658 6893732 -88378919 + ID4_ SINE ID 5 83 0 6 637 181 196 18 18 chr17 6893732 6893789 -88378862 + GA-rich Low_complexity Low_complexity 6 62 0 6 637 534 246 30 69 chr17 6894295 6894426 -88378225 + RSINE1 SINE B4 2 127 -38 6 637 479 299 127 35 chr17 6895061 6895290 -88377361 + B4A SINE B4 1 250 -42 6 637 676 219 141 5 chr17 6895519 6895703 -88376948 - B3 SINE B2 -6 210 2 6 637 994 241 15 5 chr17 6896212 6896412 -88376239 + ID_B1 SINE B4 19 220 -4 6 637 605 197 6 27 chr17 6896439 6896622 -88376029 + (TATG)n Simple_repeat Simple_repeat 2 180 0 6 637 335 23 0 22 chr17 6896988 6897033 -88375618 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 6 637 1113 44 0 7 chr17 6897034 6897170 -88375481 - B1_Mus2 SINE Alu -12 135 1 6 637 393 247 0 29 chr17 6898050 6898366 -88374285 + C-rich Low_complexity Low_complexity 1 306 0 6 637 300 148 14 129 chr17 6898406 6898476 -88374175 - L1MC4a LINE L1 -1792 6090 6029 6 637 304 238 3 36 chr17 6898477 6898784 -88373867 + C-rich Low_complexity Low_complexity 1 296 0 6 637 300 148 14 129 chr17 6898784 6898854 -88373797 - L1MC4a LINE L1 -1792 6090 6029 6 637 190 180 0 32 chr17 6898855 6898918 -88373733 + C-rich Low_complexity Low_complexity 5 65 0 6 637 1712 26 0 0 chr17 6899024 6899217 -88373434 - B2_Mm1a SINE B2 0 193 1 6 637 181 193 66 66 chr17 6899262 6899323 -88373328 - L2c LINE L2 -61 3326 3266 6 637 1121 226 81 93 chr17 6899431 6899834 -88372817 - MTE2a LTR MaLR -14 407 3 6 637 275 186 41 41 chr17 6900292 6900365 -88372286 - L1M3b LINE L1 -5907 374 302 6 637 310 202 68 45 chr17 6900499 6900587 -88372064 + B2_Mm2 SINE B2 98 187 -8 6 637 203 176 0 0 chr17 6900588 6900622 -88372029 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 637 1507 169 79 38 chr17 6901056 6901450 -88371201 + RMER17C LTR ERVK 1 410 0 6 637 1110 206 29 0 chr17 6901481 6901685 -88370966 - B3 SINE B2 -5 211 2 6 637 558 275 98 15 chr17 6902470 6902673 -88369978 + ID_B1 SINE B4 2 221 -3 6 637 1129 172 54 0 chr17 6903485 6903688 -88368963 - B3 SINE B2 0 216 3 6 637 575 286 18 30 chr17 6903704 6903870 -88368781 - RSINE1 SINE B4 0 165 2 6 637 1188 68 0 0 chr17 6904174 6904321 -88368330 - B1_Mm SINE Alu 0 147 1 6 637 608 213 6 17 chr17 6904767 6904948 -88367703 + CT-rich Low_complexity Low_complexity 2 180 0 6 637 358 185 112 69 chr17 6904951 6905067 -88367584 - B1F SINE Alu -20 129 9 6 637 272 274 34 0 chr17 6906349 6906529 -88366122 + (TGGA)n Simple_repeat Simple_repeat 1 186 0 6 637 336 309 17 23 chr17 6906532 6906589 -88366062 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 6 637 198 71 0 0 chr17 6906589 6906617 -88366034 + (GCTG)n Simple_repeat Simple_repeat 4 31 0 6 637 355 260 12 80 chr17 6906617 6906783 -88365868 + (TGGA)n Simple_repeat Simple_repeat 1 154 0 6 637 226 312 162 11 chr17 6909143 6909334 -88363317 + MER33 DNA MER1_type 103 322 -2 6 637 331 212 0 15 chr17 6909463 6909530 -88363121 + Charlie12 DNA MER1_type 2803 2868 -5 6 637 1328 57 91 0 chr17 6909970 6910128 -88362523 + B2_Mm1t SINE B2 1 160 -33 6 637 351 0 0 0 chr17 6910128 6910167 -88362484 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 6 637 1328 57 91 0 chr17 6910167 6910184 -88362467 + B2_Mm1t SINE B2 161 190 -3 6 637 276 349 47 0 chr17 6910561 6910667 -88361984 + PB1 SINE Alu 1 111 -16 6 637 787 116 0 85 chr17 6911327 6911468 -88361183 + URR1B DNA MER1_type 93 221 -4 6 637 340 288 24 100 chr17 6911468 6911492 -88361159 - CYRA11_Mm Unknown Y-chromosome -308 304 153 6 637 192 273 153 9 chr17 6911654 6911765 -88360886 - MIRb SINE MIR -28 240 114 6 637 1612 183 80 3 chr17 6913755 6913974 -88358677 + ORR1D1 LTR MaLR 1 227 -147 6 637 203 0 37 0 chr17 6913974 6914001 -88358650 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 6 637 1612 201 73 23 chr17 6914001 6914127 -88358524 + ORR1D1 LTR MaLR 228 370 -9 6 637 1795 221 77 0 chr17 6914301 6914677 -88357974 + MTD LTR MaLR 1 405 -14 6 637 453 127 0 27 chr17 6914729 6914802 -88357849 - B1_Mur1 SINE Alu -1 148 78 6 637 1190 61 0 13 chr17 6914853 6915002 -88357649 + B1_Mus1 SINE Alu 2 148 0 6 637 1085 49 0 83 chr17 6915052 6915209 -88357442 + B1_Mm SINE Alu 3 146 -1 6 637 358 310 69 17 chr17 6915706 6915843 -88356808 - MLT1A0 LTR MaLR -17 373 241 6 637 1202 68 0 0 chr17 6915879 6916027 -88356624 + B1_Mus1 SINE Alu 1 148 0 6 637 183 333 60 0 chr17 6916289 6916373 -88356278 - MIRb SINE MIR -92 176 88 6 637 493 259 62 80 chr17 6916535 6916711 -88355940 + B4A SINE B4 2 174 -118 6 637 1443 57 17 0 chr17 6917526 6917703 -88354948 - B2_Mm2 SINE B2 -14 181 2 6 637 284 176 18 18 chr17 6918552 6918618 -88354033 - BC1_Mm scRNA scRNA -13 70 5 6 637 2411 88 3 0 chr17 6920107 6920424 -88352227 - ORR1A2 LTR MaLR -8 319 2 6 637 982 265 92 20 chr17 6920438 6920742 -88351909 - MLT1A0 LTR MaLR 0 365 40 6 637 356 188 31 0 chr17 6920901 6920965 -88351686 - B3 SINE B2 -10 206 141 6 637 1094 182 218 45 chr17 6920965 6921277 -88351374 - ORR1D1 LTR MaLR 0 374 9 6 637 496 212 177 0 chr17 6921287 6921400 -88351251 - B3A SINE B2 -65 133 1 6 637 578 338 29 47 chr17 6921763 6922405 -88350246 - MMTV-int LTR ERVK -185 7068 6495 6 637 1713 329 43 30 chr17 6923543 6924700 -88347951 - MMTV-int LTR ERVK -1969 5284 4113 6 637 3450 315 55 52 chr17 6924811 6927331 -88345320 - MMTV-int LTR ERVK -3302 3951 1447 6 637 219 36 0 0 chr17 6927331 6927359 -88345292 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 6 637 3450 315 55 52 chr17 6927359 6927849 -88344802 - MMTV-int LTR ERVK -5807 1446 930 6 637 254 271 0 0 chr17 6928244 6928314 -88344337 - MMTV-int LTR ERVK -6874 379 310 6 637 342 242 0 98 chr17 6928426 6928559 -88344092 - MMTV-int LTR ERVK -5631 177 58 6 637 321 278 42 94 chr17 6928595 6928830 -88343821 - RLTR13D3 LTR ERVK -42 1072 642 6 637 25 75 0 0 chr17 6928917 6928970 -88343681 + AT_rich Low_complexity Low_complexity 1 53 0 6 637 254 132 0 0 chr17 6929054 6929092 -88343559 - B2_Mm2 SINE B2 -157 38 1 6 637 26 30 0 0 chr17 6929124 6929157 -88343494 + AT_rich Low_complexity Low_complexity 1 33 0 6 637 233 209 0 0 chr17 6929536 6929579 -88343072 - RLTR13D3 LTR ERVK -1071 43 1 6 637 226 300 20 0 chr17 6929621 6929671 -88342980 - tRNA-Ala-GCA tRNA tRNA -16 59 9 6 637 229 244 0 0 chr17 6929707 6929748 -88342903 - ID4_ SINE ID -33 50 10 6 637 1184 62 7 0 chr17 6929822 6929968 -88342683 + B1_Mus1 SINE Alu 2 148 0 6 637 368 155 14 0 chr17 6929975 6930046 -88342605 + GA-rich Low_complexity Low_complexity 2 73 0 6 637 318 50 0 0 chr17 6930058 6930098 -88342553 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 637 482 208 112 0 chr17 6930182 6930307 -88342344 - B2_Mm2 SINE B2 -4 191 53 6 637 354 23 0 0 chr17 6930331 6930374 -88342277 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 637 324 270 302 9 chr17 6930732 6930951 -88341700 + L1M5 LINE L1 3016 3298 -2848 6 637 885 155 7 26 chr17 6930993 6931145 -88341506 - B1_Mur3 SINE Alu 0 149 1 6 637 606 302 27 0 chr17 6931831 6931980 -88340671 + B4A SINE B4 13 165 -127 6 637 206 222 0 0 chr17 6931986 6932022 -88340629 + (ATGGTG)n Simple_repeat Simple_repeat 5 40 0 6 637 2303 103 3 45 chr17 6932059 6932393 -88340258 + ORR1A2 LTR MaLR 5 324 -3 6 637 450 0 0 0 chr17 6932393 6932443 -88340208 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 637 250 247 150 82 chr17 6933162 6933369 -88339282 + B4A SINE B4 66 286 -6 7 637 262 184 20 0 chr17 6933988 6934037 -88338614 - MER5A1 DNA MER1_type -45 121 72 7 637 678 198 0 18 chr17 6934412 6934525 -88338126 + B1_Mur1 SINE Alu 1 111 -38 7 637 232 295 0 60 chr17 6934458 6934541 -88338110 + RLTR25A LTR ERVK 521 598 -505 7 637 445 190 14 66 chr17 6934658 6935013 -88337638 + (CA)n Simple_repeat Simple_repeat 1 336 0 7 637 216 143 0 0 chr17 6935083 6935125 -88337526 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 637 474 260 23 45 chr17 6935710 6935843 -88336808 + B1_Mur2 SINE Alu 12 141 -8 7 637 969 157 0 0 chr17 6936444 6936616 -88336035 + (CTCA)n Simple_repeat Simple_repeat 1 172 0 7 637 888 144 0 0 chr17 6936761 6936900 -88335751 - B2_Mm2 SINE B2 -9 186 48 7 637 1197 234 94 51 chr17 6937480 6937831 -88334820 - ORR1D2 LTR MaLR -4 366 1 7 637 296 273 104 32 chr17 6939949 6940074 -88332577 + RSINE1 SINE B4 3 136 -29 7 637 1058 184 41 32 chr17 6941698 6941917 -88330734 - URR1B DNA MER1_type 0 225 5 7 637 387 60 0 0 chr17 6945617 6945667 -88326984 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 637 288 0 0 0 chr17 6946444 6946476 -88326175 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 638 683 245 104 56 chr17 6949801 6950069 -88322582 - B4A SINE B4 -8 284 4 7 638 446 250 163 48 chr17 6952488 6952740 -88319911 + B4A SINE B4 2 282 -10 7 638 201 128 0 49 chr17 6952785 6952826 -88319825 + A-rich Low_complexity Low_complexity 2 40 0 7 638 332 296 20 0 chr17 6953847 6953945 -88318706 + PB1D10 SINE Alu 1 100 -17 7 638 245 242 15 0 chr17 6953952 6954018 -88318633 + GA-rich Low_complexity Low_complexity 2 68 0 7 638 260 346 98 10 chr17 6954019 6954212 -88318439 + L1MC4 LINE L1 6796 7005 -1037 7 638 1370 79 21 0 chr17 6954327 6954517 -88318134 - B2_Mm2 SINE B2 -1 194 1 7 638 890 17 0 9 chr17 6954517 6954633 -88318018 + B1_Mus1 SINE Alu 34 148 0 7 638 636 174 26 0 chr17 6956317 6956432 -88316219 - PB1D9 SINE Alu -1 119 2 7 638 580 242 108 26 chr17 6959330 6959525 -88313126 - ID_B1 SINE B4 -12 212 2 7 638 447 220 50 38 chr17 6960864 6961017 -88311634 + B3A SINE B2 47 215 -1 7 638 902 214 15 15 chr17 6964623 6964822 -88307829 + B3 SINE B2 1 199 -17 7 638 322 296 44 38 chr17 6964876 6965034 -88307617 - L1MCa LINE L1 -4548 1960 1802 7 638 23 54 0 0 chr17 6965045 6965082 -88307569 + AT_rich Low_complexity Low_complexity 1 37 0 7 638 491 178 16 130 chr17 6965336 6965478 -88307173 + B1_Mur1 SINE Alu 11 135 -14 7 638 1099 55 7 0 chr17 6965829 6965975 -88306676 + B1_Mus1 SINE Alu 1 147 -1 7 638 283 312 0 79 chr17 6966205 6966306 -88306345 + B4A SINE B4 200 292 0 7 638 315 0 0 0 chr17 6966333 6966368 -88306283 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 638 647 148 101 8 chr17 6966455 6966584 -88306067 - B1F2 SINE Alu -8 141 1 7 638 719 186 43 0 chr17 6966761 6966901 -88305750 + B1_Mur3 SINE Alu 1 146 -3 7 638 206 32 32 0 chr17 6966901 6966932 -88305719 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 7 638 297 0 0 0 chr17 6966964 6966997 -88305654 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 638 421 243 29 19 chr17 6967502 6967607 -88305044 + RLTR23 LTR ERV1 325 430 0 7 638 477 233 32 40 chr17 6968668 6968793 -88303858 + RSINE1 SINE B4 11 134 -31 7 638 21 0 0 0 chr17 6969084 6969105 -88303546 + AT_rich Low_complexity Low_complexity 1 21 0 7 638 550 231 0 8 chr17 6969537 6969655 -88302996 - PB1D10 SINE Alu 0 117 1 7 638 767 125 14 42 chr17 6970853 6970995 -88301656 - B1_Mur2 SINE Alu 0 149 12 7 638 324 310 26 0 chr17 6971580 6971693 -88300958 - L1MB7 LINE L1 -13 6171 6056 7 638 289 226 120 70 chr17 6971694 6971794 -88300857 - PB1D10 SINE Alu 0 117 13 7 638 344 271 186 9 chr17 6971796 6972016 -88300635 - L1MB7 LINE L1 -123 6061 5803 7 638 30 45 0 0 chr17 6973202 6973246 -88299405 + AT_rich Low_complexity Low_complexity 1 44 0 7 638 236 354 99 33 chr17 6973247 6973399 -88299252 - RSINE1 SINE B4 -2 163 2 7 638 1128 61 0 7 chr17 6975071 6975220 -88297431 - B1_Mus1 SINE Alu 0 148 1 7 638 534 143 0 0 chr17 6975641 6975732 -88296919 + (TG)n Simple_repeat Simple_repeat 1 91 0 7 638 243 268 14 14 chr17 6975829 6975901 -88296750 - PB1D10 SINE Alu -9 108 37 7 638 699 225 157 0 chr17 6977334 6977512 -88295139 - B3 SINE B2 -7 209 4 7 638 365 268 66 66 chr17 6978276 6978428 -88294223 - RSINE1 SINE B4 0 165 14 7 638 306 173 0 0 chr17 6978593 6978668 -88293983 + GA-rich Low_complexity Low_complexity 1 75 0 7 638 1061 61 0 26 chr17 6979348 6979499 -88293152 + B1_Mus2 SINE Alu 1 147 0 7 638 621 61 0 0 chr17 6980085 6980167 -88292484 + (CA)n Simple_repeat Simple_repeat 2 83 0 7 638 238 267 0 0 chr17 6980917 6980977 -88291674 - MER58C DNA MER1_type -15 200 141 7 638 436 271 120 33 chr17 6982040 6982223 -88290428 - B3 SINE B2 -6 210 12 7 638 780 251 41 5 chr17 6982260 6982456 -88290195 + ID_B1 SINE B4 5 207 -17 7 638 22 0 0 0 chr17 6983094 6983116 -88289535 + AT_rich Low_complexity Low_complexity 1 22 0 7 638 218 314 0 0 chr17 6983916 6983967 -88288684 + ID4 SINE ID 30 80 -3 7 638 180 0 0 0 chr17 6984823 6984843 -88287808 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 7 638 29 0 0 0 chr17 6985768 6985797 -88286854 + AT_rich Low_complexity Low_complexity 1 29 0 7 638 209 171 0 0 chr17 6987039 6987074 -88285577 + (CGG)n Simple_repeat Simple_repeat 1 35 0 7 638 27 0 0 0 chr17 6987169 6987196 -88285455 + GC_rich Low_complexity Low_complexity 1 27 0 7 638 188 284 47 47 chr17 6988219 6988304 -88284347 + MIRb SINE MIR 125 209 -59 7 638 1354 71 11 11 chr17 6989235 6989421 -88283230 - B2_Mm2 SINE B2 -7 188 3 7 638 233 229 0 176 chr17 6989517 6989602 -88283049 + MER5A DNA MER1_type 120 189 0 7 638 387 0 0 0 chr17 6990904 6990947 -88281704 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 638 447 343 17 51 chr17 6991801 6991976 -88280675 - B4A SINE B4 -117 175 7 7 638 838 263 0 35 chr17 6992020 6992221 -88280430 - ID_B1 SINE B4 -30 194 1 7 638 500 244 199 6 chr17 6992508 6992689 -88279962 - B3 SINE B2 0 216 1 7 638 1057 67 0 0 chr17 6992719 6992853 -88279798 + B1_Mus1 SINE Alu 2 135 -13 7 638 26 0 0 0 chr17 6993373 6993399 -88279252 + AT_rich Low_complexity Low_complexity 1 26 0 7 638 314 254 51 60 chr17 6993739 6993856 -88278795 - MER102b DNA MER1_type -138 203 88 7 638 842 198 35 18 chr17 6994637 6994807 -88277844 + B3 SINE B2 1 173 -43 7 638 885 186 0 0 chr17 6994871 6995095 -88277556 + (CATA)n Simple_repeat Simple_repeat 1 224 0 7 638 1049 70 0 27 chr17 6995300 6995447 -88277204 + B1_Mus1 SINE Alu 1 143 -5 7 638 997 31 8 8 chr17 6995449 6995579 -88277072 + (GAAA)n Simple_repeat Simple_repeat 4 133 0 7 638 306 148 0 0 chr17 6995895 6995949 -88276702 + (GAAA)n Simple_repeat Simple_repeat 3 56 0 7 638 362 123 31 0 chr17 6996786 6996851 -88275800 + CT-rich Low_complexity Low_complexity 1 67 0 7 638 1214 116 21 0 chr17 6996851 6997040 -88275611 - B2_Mm1t SINE B2 0 193 1 7 638 543 110 0 0 chr17 6997041 6997123 -88275528 - 4.5SRNA scRNA scRNA -1 93 12 7 638 242 211 84 0 chr17 6997571 6997642 -88275009 + PB1D10 SINE Alu 40 116 -1 7 638 310 255 70 20 chr17 6998178 6998278 -88274373 + ID_B1 SINE B4 107 211 -13 7 638 231 268 90 30 chr17 6998772 6998872 -88273779 - MIRb SINE MIR -139 129 24 7 638 290 261 0 30 chr17 6999585 6999652 -88272999 + ID4_ SINE ID 8 72 -11 7 638 502 222 11 22 chr17 6999669 6999849 -88272802 + GA-rich Low_complexity Low_complexity 3 180 0 7 638 320 304 26 9 chr17 7000572 7000688 -88271963 - MLT1C LTR MaLR -315 152 35 1 638 992 244 125 8 chr17 7000753 7001009 -88271642 - B4 SINE B4 -4 288 3 2 638 567 231 0 0 chr17 7001571 7001731 -88270920 + (TG)n Simple_repeat Simple_repeat 1 160 0 3 638 559 256 23 8 chr17 7002484 7002614 -88270037 + RSINE1 SINE B4 2 133 -32 4 638 234 338 0 0 chr17 7003502 7003576 -88269075 - ID4_ SINE ID -9 74 1 5 638 219 250 0 45 chr17 7003802 7003869 -88268782 + CT-rich Low_complexity Low_complexity 2 65 0 6 638 281 315 0 52 chr17 7003875 7003972 -88268679 - PB1 SINE Alu -3 124 33 7 638 204 200 55 0 chr17 7004399 7004454 -88268197 + C-rich Low_complexity Low_complexity 4 61 0 8 638 398 139 0 14 chr17 7004517 7004590 -88268061 + CT-rich Low_complexity Low_complexity 2 73 0 9 638 1150 75 0 0 chr17 7004600 7004747 -88267904 - B1_Mus1 SINE Alu 0 148 2 1 638 282 211 98 22 chr17 7005371 7005463 -88267188 + L1M4c LINE L1 2042 2140 -4244 1 638 641 274 0 0 chr17 7005478 7005602 -88267049 + RSINE1 SINE B4 6 129 -36 1 638 1606 204 33 18 chr17 7005685 7005736 -88266915 + ORR1D2 LTR MaLR 35 82 -288 1 638 2358 136 5 55 chr17 7005736 7006134 -88266517 + ORR1C1 LTR MaLR 1 378 0 1 638 1606 204 33 18 chr17 7006134 7006411 -88266240 + ORR1D2 LTR MaLR 83 368 -2 1 638 306 87 0 0 chr17 7006486 7006532 -88266119 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 638 1956 130 6 17 chr17 7006538 7006883 -88265768 - RLTR15 LTR ERVK -18 341 1 1 638 769 263 79 18 chr17 7007218 7007446 -88265205 + B4 SINE B4 24 265 -27 1 638 2332 75 3 0 chr17 7007446 7007767 -88264884 - ORR1A2 LTR MaLR -5 322 1 1 638 285 239 0 107 chr17 7008677 7008780 -88263871 - B1F1 SINE Alu -57 92 1 1 638 249 290 0 0 chr17 7008719 7008788 -88263863 - B4A SINE B4 -146 146 78 2 638 673 240 272 30 chr17 7009580 7009915 -88262736 + MTD LTR MaLR 4 419 0 2 638 687 181 14 43 chr17 7010159 7010298 -88262353 + B1_Mur3 SINE Alu 2 136 -13 2 638 324 48 0 0 chr17 7010298 7010340 -88262311 + (CAA)n Simple_repeat Simple_repeat 1 42 0 2 638 474 299 43 7 chr17 7010366 7010504 -88262147 + RSINE1 SINE B4 2 144 -21 2 638 200 311 0 51 chr17 7010669 7010747 -88261904 + L2c LINE L2 3296 3369 -18 2 638 676 286 55 44 chr17 7010781 7011143 -88261508 - MLT1B LTR MaLR -8 382 17 2 638 644 234 28 0 chr17 7011380 7011521 -88261130 + B1_Mur3 SINE Alu 3 147 -2 2 638 207 100 0 0 chr17 7011522 7011552 -88261099 + (CAGA)n Simple_repeat Simple_repeat 1 30 0 2 638 433 194 12 63 chr17 7011836 7011968 -88260683 + B1_Mur3 SINE Alu 2 127 0 2 638 695 284 130 16 chr17 7011977 7012231 -88260420 + B4A SINE B4 4 286 -6 3 638 1783 151 107 6 chr17 7013766 7014113 -88258538 + MTD LTR MaLR 37 418 -1 3 638 616 238 6 38 chr17 7014451 7014608 -88258043 + RSINE1 SINE B4 8 159 -6 3 638 201 121 0 0 chr17 7014921 7014954 -88257697 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 3 638 366 284 18 6 chr17 7014972 7015135 -88257516 + (TTTA)n Simple_repeat Simple_repeat 2 166 0 3 638 611 112 9 0 chr17 7015152 7015259 -88257392 + (TCTA)n Simple_repeat Simple_repeat 4 111 0 3 638 277 270 13 26 chr17 7015797 7015873 -88256778 + ID4_ SINE ID 3 77 -6 3 638 387 0 0 0 chr17 7017228 7017271 -88255380 + (GA)n Simple_repeat Simple_repeat 1 43 0 3 638 201 108 0 0 chr17 7017603 7017640 -88255011 + (A)n Simple_repeat Simple_repeat 1 37 0 3 638 679 294 39 9 chr17 7017991 7018214 -88254437 + B4A SINE B4 2 231 -61 3 638 745 196 63 0 chr17 7018214 7018357 -88254294 + B3A SINE B2 1 152 -46 3 638 426 20 0 0 chr17 7018358 7018409 -88254242 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 638 306 204 128 11 chr17 7018409 7018493 -88254158 + PB1D9 SINE Alu 25 118 -2 4 638 304 307 0 0 chr17 7018508 7018583 -88254068 + B4A SINE B4 214 288 -4 3 638 26 88 0 0 chr17 7019554 7019622 -88253029 + AT_rich Low_complexity Low_complexity 1 68 0 4 638 186 43 0 0 chr17 7019633 7019656 -88252995 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 4 638 713 226 0 0 chr17 7019660 7019793 -88252858 - B1_Mur2 SINE Alu -14 135 3 4 638 475 115 118 50 chr17 7019802 7019921 -88252730 - Lx9 LINE L1 -1 7643 7517 4 638 600 146 0 0 chr17 7019923 7020026 -88252625 + (TG)n Simple_repeat Simple_repeat 1 103 0 4 638 599 181 138 7 chr17 7020030 7020175 -88252476 - Lx9 LINE L1 -183 7461 7298 4 638 828 268 14 14 chr17 7020180 7020403 -88252248 - B4A SINE B4 -64 228 6 4 638 366 271 78 50 chr17 7021757 7021898 -88250753 - L1MC4 LINE L1 -306 7689 7463 4 638 859 96 61 8 chr17 7022521 7022785 -88249866 + (TCTA)n Simple_repeat Simple_repeat 1 278 0 4 638 422 264 24 155 chr17 7022792 7022885 -88249766 - L1MC4 LINE L1 -971 7071 7012 4 638 858 235 80 0 chr17 7022885 7023085 -88249566 - B3 SINE B2 0 216 1 5 638 422 264 24 155 chr17 7023085 7023242 -88249409 - L1MC4 LINE L1 -1031 7011 6854 4 638 984 243 102 34 chr17 7023244 7023551 -88249100 - MTD LTR MaLR -7 412 58 5 638 354 348 9 0 chr17 7024601 7024713 -88247938 + RSINE1 SINE B4 2 114 -51 5 638 396 0 0 0 chr17 7024713 7024757 -88247894 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 638 1186 29 0 0 chr17 7025381 7025518 -88247133 + B1_Mus2 SINE Alu 1 137 -10 5 638 188 0 74 0 chr17 7025518 7025545 -88247106 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 638 486 304 180 51 chr17 7025561 7026033 -88246618 - MT2A LTR ERVL 0 533 1 5 638 388 209 81 11 chr17 7026268 7026355 -88246296 + B1F2 SINE Alu 56 148 -1 5 638 1979 91 6 67 chr17 7026476 7026818 -88245833 - ORR1A4 LTR MaLR -8 321 1 5 638 754 141 14 36 chr17 7027585 7027725 -88244926 + B1_Mur4 SINE Alu 2 138 -12 5 638 252 0 0 0 chr17 7027725 7027753 -88244898 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 6 638 338 326 159 0 chr17 7027995 7028133 -88244518 + RSINE1 SINE B4 4 163 -2 6 638 2409 105 14 108 chr17 7028150 7028326 -88244325 + ORR1C1 LTR MaLR 1 156 -222 6 638 1251 35 0 0 chr17 7028326 7028470 -88244181 + B1_Mus1 SINE Alu 1 144 -4 6 638 261 0 0 0 chr17 7028472 7028501 -88244150 + (CAA)n Simple_repeat Simple_repeat 2 30 0 6 638 2409 105 14 108 chr17 7028501 7028738 -88243913 + ORR1C1 LTR MaLR 157 378 0 6 638 949 260 29 94 chr17 7029873 7030362 -88242289 + RLTR12B LTR ERVK 47 503 -25 6 638 1111 220 0 14 chr17 7030429 7030646 -88242005 + B3 SINE B2 2 215 -1 6 638 1020 90 0 0 chr17 7030765 7030910 -88241741 + B2_Mm2 SINE B2 1 145 -50 6 638 371 18 71 0 chr17 7030950 7031006 -88241645 + B2_Mm1a SINE B2 127 186 -7 6 638 417 322 0 32 chr17 7031008 7031162 -88241489 - B3A SINE B2 -15 183 35 6 638 497 229 0 27 chr17 7031211 7031323 -88241328 + PB1D9 SINE Alu 5 113 -7 7 638 217 276 94 9 chr17 7031543 7031571 -88241080 - B3 SINE B2 -100 116 2 7 638 281 269 26 0 chr17 7031571 7031649 -88241002 - B4A SINE B4 -211 81 2 7 638 581 108 0 51 chr17 7033172 7033270 -88239381 - B2_Mm2 SINE B2 -88 107 15 7 638 268 250 31 52 chr17 7033726 7033823 -88238828 + MT2B LTR ERVL 184 278 -323 7 638 731 84 0 9 chr17 7033743 7033851 -88238800 + B1_Mur4 SINE Alu 44 150 0 7 638 374 308 111 35 chr17 7033857 7034173 -88238478 - L1ME1 LINE L1 -58 6121 5782 7 638 850 243 89 29 chr17 7034300 7034580 -88238071 + RMER21B LTR ERV1 271 567 -275 7 638 1508 101 0 20 chr17 7034678 7034922 -88237729 + RLTR11B LTR ERVK 214 452 -1 7 638 345 100 267 0 chr17 7034926 7034986 -88237665 - tRNA-Lys-AAG tRNA tRNA 0 76 1 7 638 1491 149 51 41 chr17 7034986 7035301 -88237350 - RLTR11B LTR ERVK -133 320 3 8 638 257 265 15 0 chr17 7035464 7035532 -88237119 + ID4_ SINE ID 10 78 -5 8 638 183 80 0 0 chr17 7035600 7035625 -88237026 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 8 638 1849 191 51 8 chr17 7035658 7036028 -88236623 + MTD LTR MaLR 22 407 -12 8 638 348 306 22 15 chr17 7036109 7036245 -88236406 - L1MEf LINE L1 -1250 4896 4760 8 638 1384 146 23 0 chr17 7036416 7036636 -88236015 - URR1B DNA MER1_type 0 225 1 8 638 3527 23 2 0 chr17 7036688 7037083 -88235568 + MTA_Mm LTR MaLR 1 396 0 8 638 936 143 47 52 chr17 7037105 7037297 -88235354 - B2_Mm2 SINE B2 -1 194 4 8 638 537 244 90 51 chr17 7037337 7037592 -88235059 - L1MEf LINE L1 -1864 4282 4018 8 638 239 244 11 44 chr17 7037640 7037730 -88234921 - MLT1A1 LTR MaLR -5 403 317 8 638 1064 102 7 0 chr17 7038207 7038354 -88234297 + B1_Mur4 SINE Alu 2 149 -1 8 638 529 252 102 0 chr17 7038533 7038680 -88233971 + RSINE1 SINE B4 4 165 0 9 638 401 180 11 0 chr17 7038699 7038788 -88233863 + (CA)n Simple_repeat Simple_repeat 2 91 0 9 638 253 258 32 0 chr17 7038870 7038932 -88233719 + CT-rich Low_complexity Low_complexity 3 66 0 9 638 404 297 25 19 chr17 7039761 7039922 -88232729 - LTR40a LTR ERVL -357 162 1 9 638 240 352 45 18 chr17 7040151 7040261 -88232390 - ORR1D1 LTR MaLR -231 143 31 9 638 352 307 104 28 chr17 7040283 7040427 -88232224 + B3A SINE B2 38 192 -6 9 638 308 189 40 142 chr17 7040508 7040656 -88231995 - L1MEf LINE L1 -3822 2324 2192 8 638 732 262 19 24 chr17 7040746 7040957 -88231694 + B3 SINE B2 1 210 -6 9 638 458 296 42 14 chr17 7040985 7041129 -88231522 + MER58B DNA MER1_type 179 326 -15 9 638 7013 125 16 4 chr17 7041209 7042846 -88229805 - Lx LINE L1 0 6654 4999 9 638 299 122 0 0 chr17 7042846 7042895 -88229756 - ETnERV-int LTR ERVK -1556 5850 5802 9 638 6690 178 21 12 chr17 7042887 7044109 -88228542 - ETnERV-int LTR ERVK -2413 4993 2986 9 638 2731 71 143 141 chr17 7044109 7044620 -88228031 + RLTR1B LTR ERV1 1 512 0 1 638 12153 207 31 27 chr17 7044620 7047713 -88224938 - ETnERV-int LTR ERVK -3182 2985 2 9 638 996 200 40 80 chr17 7047719 7048050 -88224601 - RLTRETN_Mm LTR ERVK -4 405 1 9 638 21109 146 9 13 chr17 7048055 7049636 -88223015 - L1_Mur1 LINE L1 -1066 4820 3267 1 638 1250 40 0 0 chr17 7049636 7049784 -88222867 - B1_Mus1 SINE Alu 0 148 1 1 638 21109 146 9 13 chr17 7049784 7051811 -88220840 - L1_Mur1 LINE L1 -2620 3266 1226 1 638 1053 53 60 0 chr17 7051816 7051967 -88220684 + B2_Mm2 SINE B2 2 161 -34 1 638 252 0 0 0 chr17 7051970 7051998 -88220653 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 1 638 4597 106 53 0 chr17 7052027 7052690 -88219961 - L1VL4 LINE L1 -5422 880 183 1 638 338 255 78 47 chr17 7052699 7052892 -88219759 - L1MEf LINE L1 -4153 2089 1891 8 638 860 151 0 28 chr17 7053376 7053519 -88219132 - B1_Mus1 SINE Alu -9 139 1 1 638 274 268 67 19 chr17 7054237 7054446 -88218205 - L1M4 LINE L1 -1680 4466 4248 1 638 482 79 13 0 chr17 7054458 7054534 -88218117 + (TG)n Simple_repeat Simple_repeat 2 78 0 1 638 694 258 25 0 chr17 7054534 7054693 -88217958 - B3 SINE B2 -51 165 3 1 638 333 268 75 90 chr17 7054815 7055016 -88217635 - LTR48 LTR ERV1 0 787 590 1 638 5031 103 14 17 chr17 7055607 7056365 -88216286 - RMER6A LTR ERVK 0 756 1 1 638 356 321 12 0 chr17 7057503 7057587 -88215064 - ID_B1 SINE B4 -53 171 87 1 638 239 331 10 33 chr17 7057836 7058001 -88214650 - L1M4 LINE L1 -2320 3820 3662 1 638 338 322 170 5 chr17 7058345 7058436 -88214215 - L1M4 LINE L1 -2460 3686 3595 1 638 357 43 0 0 chr17 7058436 7058483 -88214168 + (TC)n Simple_repeat Simple_repeat 1 47 0 1 638 338 322 170 5 chr17 7058483 7058603 -88214048 - L1M4 LINE L1 -2552 3594 3440 1 638 481 270 87 57 chr17 7058615 7058851 -88213800 - L1M2 LINE L1 -2817 3326 3086 1 638 222 37 0 0 chr17 7058851 7058878 -88213773 + (CTTG)n Simple_repeat Simple_repeat 2 28 0 1 638 481 270 87 57 chr17 7058878 7059077 -88213574 - L1M2 LINE L1 -3058 3085 2878 1 638 268 322 16 8 chr17 7059076 7059198 -88213453 - L1M2 LINE L1 -3540 2603 2481 1 638 716 35 0 0 chr17 7059226 7059312 -88213339 + B1_Mus2 SINE Alu 57 142 -5 1 638 580 246 141 2 chr17 7060305 7060478 -88212173 + B3A SINE B2 1 196 -20 1 638 419 278 44 19 chr17 7060508 7060666 -88211985 - RLTR12B LTR ERVK -29 499 338 1 638 3503 131 7 127 chr17 7060668 7061387 -88211264 - RMER6A LTR ERVK -16 740 108 1 638 648 292 13 105 chr17 7061463 7061777 -88210874 - RLTR11B LTR ERVK -168 285 1 1 638 429 20 0 0 chr17 7062248 7062298 -88210353 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 638 1373 73 28 0 chr17 7062311 7062488 -88210163 + B2_Mm2 SINE B2 4 185 -10 1 638 508 208 0 38 chr17 7062508 7062613 -88210038 - B1_Mus1 SINE Alu -12 136 36 1 638 927 144 179 41 chr17 7062843 7063038 -88209613 + URR1A DNA MER1_type 5 226 0 1 638 239 217 0 0 chr17 7063199 7063245 -88209406 + CT-rich Low_complexity Low_complexity 1 46 0 1 638 808 261 46 31 chr17 7063797 7063960 -88208691 + B3A SINE B2 2 164 -34 1 638 432 0 0 0 chr17 7063960 7064008 -88208643 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 638 808 261 46 31 chr17 7064008 7064038 -88208613 + B3A SINE B2 165 198 0 1 638 688 305 55 27 chr17 7064064 7064283 -88208368 + B4A SINE B4 68 292 0 1 638 321 26 0 0 chr17 7065288 7065326 -88207325 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 638 218 298 0 0 chr17 7067524 7067581 -88205070 + CT-rich Low_complexity Low_complexity 3 59 0 1 638 549 306 94 53 chr17 7067648 7067893 -88204758 + MER31B LTR ERV1 1 255 -211 1 638 225 355 109 52 chr17 7068229 7068422 -88204229 - MER102c DNA MER1_type -22 309 106 1 638 1956 195 29 5 chr17 7068754 7069140 -88203511 + MTD LTR MaLR 1 395 -24 1 638 222 218 18 18 chr17 7069216 7069272 -88203379 + G-rich Low_complexity Low_complexity 3 58 0 1 638 185 222 0 43 chr17 7069425 7069472 -88203179 - L3 LINE CR1 -1796 2693 2649 1 638 878 226 65 5 chr17 7069717 7069917 -88202734 - B3 SINE B2 -4 212 1 1 638 882 249 123 101 chr17 7070276 7070525 -88202126 - RMER4A LTR ERVK -9 457 240 1 638 1068 75 0 0 chr17 7070525 7070658 -88201993 - B1_Mus1 SINE Alu -15 133 1 1 638 882 249 123 101 chr17 7070658 7070854 -88201797 - RMER4A LTR ERVK -227 239 2 1 638 870 269 35 0 chr17 7071453 7071650 -88201001 + ID_B1 SINE B4 1 204 -20 1 638 810 199 0 0 chr17 7071713 7072003 -88200648 + (TG)n Simple_repeat Simple_repeat 1 290 0 1 638 236 170 19 0 chr17 7072595 7072648 -88200003 + GA-rich Low_complexity Low_complexity 3 56 0 1 638 1750 104 206 51 chr17 7072669 7072707 -88199944 - RMER17C LTR ERVK 0 410 388 1 638 1027 87 152 12 chr17 7072707 7072871 -88199780 + B2_Mm2 SINE B2 1 187 -8 1 638 1750 104 206 51 chr17 7072871 7073187 -88199464 - RMER17C LTR ERVK -23 387 1 1 638 2004 149 118 8 chr17 7073219 7073591 -88199060 - MTC LTR MaLR -8 413 1 1 638 991 251 74 30 chr17 7073616 7073953 -88198698 + RMER5 LTR ERV1 49 400 -134 1 638 252 0 0 0 chr17 7074178 7074206 -88198445 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 638 1323 92 43 0 chr17 7074218 7074402 -88198249 + B2_Mm2 SINE B2 2 193 -2 1 638 219 80 59 20 chr17 7074402 7074453 -88198198 + (CAAA)n Simple_repeat Simple_repeat 1 53 0 1 638 230 310 155 52 chr17 7074787 7074981 -88197670 - MIR SINE MIR -43 219 6 1 638 2408 119 69 15 chr17 7075199 7075591 -88197060 + MTC LTR MaLR 1 413 -8 1 638 407 216 61 10 chr17 7076053 7076074 -88196577 - PB1D10 SINE Alu -2 115 13 1 638 427 197 13 13 chr17 7076074 7076151 -88196500 - ID_B1 SINE B4 -54 170 94 1 638 207 200 0 0 chr17 7076314 7076354 -88196297 + A-rich Low_complexity Low_complexity 3 42 0 1 638 312 70 0 0 chr17 7076534 7076577 -88196074 + (TCCA)n Simple_repeat Simple_repeat 1 43 0 1 638 2375 201 36 27 chr17 7077019 7077575 -88195076 - RLTR31_Mm LTR ERVK 0 561 1 1 638 710 154 14 97 chr17 7077615 7077677 -88194974 - B1_Mur2 SINE Alu -16 133 73 1 79 4897 118 13 9 chr17 7077677 7078428 -88194223 + RMER6A LTR ERVK 3 756 0 1 639 710 154 14 97 chr17 7078428 7078509 -88194142 - B1_Mur2 SINE Alu -77 72 2 1 639 548 247 65 21 chr17 7079226 7079412 -88193239 + MER2 DNA MER2_type 87 280 -65 1 639 30235 56 2 10 chr17 7079419 7083527 -88189124 - L1Md_F2 LINE L1 -1 6581 2513 1 639 1134 86 51 22 chr17 7083527 7083705 -88188946 - B2_Mm1t SINE B2 -9 184 2 1 639 30235 65 2 13 chr17 7083705 7084246 -88188405 - L1Md_F2 LINE L1 -3371 2512 1975 1 639 5217 56 2 2 chr17 7084243 7084866 -88187785 - L1Md_F2 LINE L1 -5604 1012 390 1 639 508 304 30 0 chr17 7084946 7085081 -88187570 - ID_B1 SINE B4 -2 222 84 1 639 492 18 0 0 chr17 7085086 7085143 -88187508 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 1 639 2590 99 42 30 chr17 7085143 7085548 -88187103 + MTC LTR MaLR 4 413 -8 1 639 419 0 20 0 chr17 7085555 7085606 -88187045 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 1 639 1007 311 46 3 chr17 7085929 7086277 -88186374 - MLT1A0 LTR MaLR -2 363 1 1 639 504 143 0 0 chr17 7086334 7086418 -88186233 + (GAAA)n Simple_repeat Simple_repeat 3 86 0 1 639 1025 90 11 27 chr17 7086559 7086742 -88185909 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1 639 468 226 3 28 chr17 7086742 7086859 -88185792 - PB1 SINE Alu -8 119 2 1 639 288 0 0 0 chr17 7086878 7086910 -88185741 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 639 437 196 167 0 chr17 7088535 7088637 -88184014 + PB1D9 SINE Alu 1 119 -1 1 639 821 258 6 3 chr17 7088654 7088822 -88183829 + B3 SINE B2 1 164 -52 1 639 495 0 0 0 chr17 7088822 7088877 -88183774 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 639 574 266 16 96 chr17 7088877 7088895 -88183756 + B2_Mm2 SINE B2 161 172 -23 1 639 217 118 19 19 chr17 7088956 7089008 -88183643 + (CCAA)n Simple_repeat Simple_repeat 1 52 0 1 639 242 341 23 0 chr17 7089093 7089181 -88183470 + L2b LINE L2 3276 3365 -10 1 639 273 320 13 0 chr17 7089808 7089883 -88182768 + PB1D10 SINE Alu 34 109 -8 1 639 206 179 18 0 chr17 7090407 7090463 -88182188 + T-rich Low_complexity Low_complexity 3 59 0 1 639 419 102 0 28 chr17 7090463 7090534 -88182117 + (TCCC)n Simple_repeat Simple_repeat 1 69 0 1 639 834 168 14 21 chr17 7090542 7090682 -88181969 - B1_Mur2 SINE Alu 0 149 11 1 639 323 247 10 97 chr17 7090590 7090693 -88181958 - MT2B LTR ERVL -344 257 164 1 639 405 279 89 94 chr17 7090642 7090844 -88181807 + MTEa LTR MaLR 173 378 -1 1 639 229 353 78 7 chr17 7090844 7090987 -88181664 - MLT1D LTR MaLR -349 156 3 1 639 1208 61 0 0 chr17 7091204 7091351 -88181300 - B1_Mm SINE Alu 0 147 1 1 639 14296 25 1 0 chr17 7091468 7093792 -88178859 - L1Md_T LINE L1 -1 6581 4256 1 639 1222 27 0 40 chr17 7095479 7095631 -88177020 - B1_Mus2 SINE Alu 0 147 2 1 639 200 59 29 0 chr17 7096184 7096218 -88176433 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 639 1417 79 21 0 chr17 7096225 7096414 -88176237 + B2_Mm2 SINE B2 2 194 -1 1 639 410 319 205 25 chr17 7096925 7097208 -88175443 + BLACKJACK DNA AcHobo 432 765 -2179 1 639 2841 75 62 124 chr17 7097217 7097731 -88174920 + RLTR45 LTR ERVK 1 482 0 1 639 244 211 19 19 chr17 7098139 7098192 -88174459 - ID_B1 SINE B4 -13 211 159 1 639 217 191 35 200 chr17 7098192 7098224 -88174427 - B1F SINE Alu -13 136 66 1 639 407 266 247 6 chr17 7098229 7098399 -88174252 - ID_B1 SINE B4 -13 211 1 1 639 252 0 0 0 chr17 7099405 7099433 -88173218 + (T)n Simple_repeat Simple_repeat 1 28 0 1 639 279 283 30 20 chr17 7099830 7099906 -88172745 - MER45A DNA Tip100 -7 171 93 1 639 852 185 7 0 chr17 7099906 7100052 -88172599 + B1_Mur3 SINE Alu 3 149 0 1 639 279 283 30 20 chr17 7100052 7100076 -88172575 - MER45A DNA Tip100 -86 92 70 1 639 246 423 19 0 chr17 7100075 7100179 -88172472 - MER45A DNA Tip100 -71 107 2 1 639 318 224 35 0 chr17 7101129 7101214 -88171437 - L1MA5 LINE L1 -5 6295 6208 1 639 347 294 95 39 chr17 7101742 7102078 -88170573 - L1M4 LINE L1 -3996 2650 2296 1 639 335 291 23 0 chr17 7102091 7102177 -88170474 - L1MEg LINE L1 -4115 1969 1882 1 639 1213 68 0 0 chr17 7102197 7102345 -88170306 - B1_Mus1 SINE Alu 0 148 1 1 639 522 295 26 20 chr17 7102511 7102663 -88169988 - L1M4 LINE L1 -6112 430 278 1 639 461 189 150 27 chr17 7103072 7103093 -88169558 + CYRA11_Mm Unknown Y-chromosome 148 186 -431 1 639 893 69 114 0 chr17 7103093 7103224 -88169427 - URR1B DNA MER1_type 0 225 80 2 639 538 299 22 7 chr17 7103661 7103799 -88168852 - RSINE1 SINE B4 0 165 26 2 639 235 336 8 23 chr17 7104419 7104550 -88168101 + C-rich Low_complexity Low_complexity 3 131 0 2 639 427 107 24 0 chr17 7104606 7104690 -88167961 + (CA)n Simple_repeat Simple_repeat 1 86 0 2 639 264 308 41 8 chr17 7104730 7104851 -88167800 - L1MA4 LINE L1 -370 5930 5806 2 639 25 51 0 0 chr17 7105067 7105106 -88167545 + AT_rich Low_complexity Low_complexity 1 39 0 2 639 4303 55 0 2 chr17 7106271 7106801 -88165850 + L1Md_F2 LINE L1 6042 6570 -12 2 639 200 59 29 0 chr17 7106805 7106839 -88165812 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 639 907 167 47 21 chr17 7106851 7107041 -88165610 + B2_Mm2 SINE B2 1 195 0 2 639 838 333 101 11 chr17 7107065 7107591 -88165060 + Lx8 LINE L1 6895 7467 -6 2 639 36 40 0 0 chr17 7107646 7107696 -88164955 + AT_rich Low_complexity Low_complexity 1 50 0 2 639 33 0 0 0 chr17 7109083 7109116 -88163535 + AT_rich Low_complexity Low_complexity 1 33 0 2 639 3044 76 10 0 chr17 7111023 7111419 -88161232 + MTB LTR MaLR 1 400 0 2 639 552 233 15 30 chr17 7111663 7111796 -88160855 + MT2A LTR ERVL 1 131 -402 2 639 291 167 0 0 chr17 7111796 7111844 -88160807 - MERVL_2A-int LTR ERVL -5657 104 57 2 639 679 206 8 8 chr17 7111870 7112002 -88160649 - B1_Mus1 SINE Alu -14 134 3 2 639 400 162 0 0 chr17 7112004 7112072 -88160579 - MERVL_2A-int LTR ERVL -5692 69 2 2 639 438 20 0 0 chr17 7113052 7113103 -88159548 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 639 1118 69 7 14 chr17 7113196 7113343 -88159308 - B1_Mus2 SINE Alu 0 147 2 2 639 358 320 39 31 chr17 7115861 7115990 -88156661 + B1F1 SINE Alu 3 132 -17 2 639 180 226 94 0 chr17 7116427 7116480 -88156171 + MIR SINE MIR 112 169 -93 2 639 234 0 0 0 chr17 7116594 7116620 -88156031 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 639 2575 141 19 19 chr17 7117624 7118045 -88154606 + MTC LTR MaLR 1 421 0 2 639 303 28 0 0 chr17 7118741 7118777 -88153874 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 639 816 249 113 19 chr17 7119098 7119364 -88153287 - B4 SINE B4 0 292 2 2 639 482 280 0 0 chr17 7119370 7119488 -88153163 - L1MA5 LINE L1 0 6300 6183 2 639 518 248 25 105 chr17 7119668 7119830 -88152821 - B3A SINE B2 0 198 50 2 639 293 239 286 9 chr17 7120101 7120280 -88152371 - L1MD LINE L1 -901 5458 5230 2 639 322 325 0 0 chr17 7120438 7120518 -88152133 - PB1D10 SINE Alu -4 113 34 2 639 683 236 176 13 chr17 7120521 7120834 -88151817 - L1M2 LINE L1 -1441 4702 4339 2 639 721 282 85 7 chr17 7120902 7121209 -88151442 - L1M2 LINE L1 -2446 3697 3367 2 639 720 240 26 7 chr17 7121214 7121369 -88151282 - B3 SINE B2 0 216 59 2 639 509 283 31 1 chr17 7121394 7121602 -88151049 + L1M2 LINE L1 3544 3790 -2353 2 639 299 200 0 30 chr17 7121602 7121669 -88150982 - B3 SINE B2 -151 65 1 2 639 1244 95 26 26 chr17 7121699 7121894 -88150757 + B2_Mm2 SINE B2 1 195 0 2 639 527 298 124 71 chr17 7121929 7122214 -88150437 - L1M2 LINE L1 -2509 3338 3017 2 639 407 315 0 20 chr17 7122214 7122360 -88150291 - B1F1 SINE Alu -2 147 5 2 639 567 296 112 82 chr17 7122360 7123041 -88149610 - L1M2 LINE L1 -3111 3032 2348 2 639 1244 336 75 49 chr17 7123519 7124936 -88147715 + RLTR6-int LTR ERV1 1554 3006 -4772 2 639 230 288 211 70 chr17 7125004 7125132 -88147519 - RLTR16 LTR ERVK -207 298 149 2 639 4424 12 0 0 chr17 7125132 7125614 -88147037 - LTRIS_Mm LTR ERV1 0 482 1 2 639 230 288 211 70 chr17 7125614 7125627 -88147024 - RLTR16 LTR ERVK -357 148 137 2 639 38027 28 13 14 chr17 7125627 7130212 -88142439 - MuRRS-int LTR ERV1 -13 4677 16 2 639 254 230 63 110 chr17 7130212 7130226 -88142425 - RLTR12B LTR ERVK -251 277 267 2 639 4483 6 0 0 chr17 7130226 7130708 -88141943 - LTRIS_Mm LTR ERV1 0 482 1 2 639 533 191 18 26 chr17 7130708 7130821 -88141830 - RLTR16 LTR ERVK -356 149 38 2 639 1330 85 17 6 chr17 7130822 7131000 -88141651 + B2_Mm2 SINE B2 2 181 -14 2 639 1949 337 65 54 chr17 7131096 7132718 -88139933 + MuRRS4-int LTR ERV1 2242 3891 -1172 2 639 1216 136 0 0 chr17 7132718 7132895 -88139756 - B2_Mm2 SINE B2 -18 177 1 2 639 1949 337 65 54 chr17 7132895 7133025 -88139626 + MuRRS4-int LTR ERV1 3892 4014 -1049 2 639 2079 241 52 102 chr17 7133612 7134209 -88138442 + RMER2 LTR ERV1 1 567 0 2 639 231 290 30 0 chr17 7134212 7134312 -88138339 - MusHAL1 LINE L1 -2148 564 462 2 639 291 220 73 68 chr17 7134767 7134885 -88137766 + B3A SINE B2 72 192 -6 2 639 505 226 118 32 chr17 7134885 7135168 -88137483 - L1MDa LINE L1 -3834 2703 2401 2 639 219 283 19 0 chr17 7135175 7135228 -88137423 - BC1_Mm scRNA scRNA -62 90 37 2 639 352 340 147 41 chr17 7135234 7135545 -88137106 + MER54B LTR ERVL 76 419 -482 2 639 375 298 76 28 chr17 7135552 7135697 -88136954 - L1MDa LINE L1 -4905 1728 1577 2 639 235 249 124 55 chr17 7135761 7135796 -88136855 - L1MDa LINE L1 -5124 1403 1366 2 639 1175 64 0 0 chr17 7135796 7135937 -88136714 - B1_Mus2 SINE Alu -6 141 1 2 639 324 249 123 55 chr17 7135937 7136125 -88136526 - L1MDa LINE L1 -5162 1365 1163 2 639 1298 67 21 53 chr17 7143356 7143546 -88129105 + B2_Mm2 SINE B2 2 185 -10 2 639 1058 109 0 0 chr17 7143558 7143705 -88128946 + B1_Mus1 SINE Alu 1 147 -1 2 639 254 115 19 0 chr17 7143754 7143806 -88128845 + (CAA)n Simple_repeat Simple_repeat 2 54 0 2 639 28 48 0 0 chr17 7144068 7144110 -88128541 + AT_rich Low_complexity Low_complexity 1 42 0 2 639 449 220 27 0 chr17 7144415 7144565 -88128086 + (CATA)n Simple_repeat Simple_repeat 4 157 0 2 639 315 278 14 0 chr17 7144572 7144644 -88128007 - ID4 SINE ID -7 76 4 2 639 248 223 125 55 chr17 7144644 7144680 -88127971 + Charlie10 DNA MER1_type 2682 2716 -106 2 639 5927 68 7 66 chr17 7144680 7145533 -88127118 + RLTR13B4 LTR ERVK 1 803 0 2 639 248 223 125 55 chr17 7145533 7145624 -88127027 + Charlie10 DNA MER1_type 2717 2818 -4 2 639 1018 229 191 33 chr17 7145637 7145999 -88126652 + MTD LTR MaLR 1 419 0 2 639 2240 24 0 0 chr17 7146202 7146449 -88126202 + LSU-rRNA_Hsa rRNA rRNA 3667 3913 -1122 2 639 532 171 180 0 chr17 7146675 7146786 -88125865 - B1_Mur4 SINE Alu -19 131 1 2 639 738 148 16 0 chr17 7147338 7147466 -88125185 - URR1B DNA MER1_type 0 225 96 2 639 226 261 186 41 chr17 7147613 7147785 -88124866 + L2 LINE L2 2391 2587 -832 2 639 278 224 84 84 chr17 7148400 7148507 -88124144 + MTEa LTR MaLR 1 107 -272 2 639 342 0 0 0 chr17 7148849 7148887 -88123764 + (TC)n Simple_repeat Simple_repeat 1 38 0 2 639 378 0 0 0 chr17 7148887 7148928 -88123723 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 639 24 53 0 0 chr17 7149232 7149270 -88123381 + AT_rich Low_complexity Low_complexity 1 38 0 2 639 465 137 179 0 chr17 7149859 7149954 -88122697 - L1_Mur2 LINE L1 -3838 2039 1928 2 639 871 239 97 30 chr17 7149955 7150192 -88122459 + MTEa LTR MaLR 125 377 -2 2 639 681 287 60 32 chr17 7150192 7150435 -88122216 - MLT1D LTR MaLR -254 251 2 2 639 688 221 5 108 chr17 7150874 7151077 -88121574 + B3A SINE B2 1 182 -16 2 639 187 340 129 26 chr17 7151320 7151513 -88121138 - L3 LINE CR1 -770 3719 3507 2 639 201 214 0 45 chr17 7151878 7151922 -88120729 - L2a LINE L2 -19 3407 3366 2 639 214 284 58 29 chr17 7152089 7152158 -88120493 + MIRb SINE MIR 118 188 -80 2 639 268 317 84 62 chr17 7153387 7153565 -88119086 + MIR SINE MIR 44 225 -37 2 639 233 219 29 72 chr17 7153783 7153852 -88118799 + RSINE1 SINE B4 43 108 -57 2 639 307 335 143 44 chr17 7154737 7155052 -88117599 - L2 LINE L2 -340 3079 2734 2 639 288 339 170 0 chr17 7155817 7155988 -88116663 - MIRb SINE MIR -39 229 30 2 639 534 206 59 0 chr17 7156164 7156266 -88116385 - PB1D10 SINE Alu -7 110 3 2 639 1004 94 0 0 chr17 7157044 7157182 -88115469 - B1_Mus1 SINE Alu 0 148 11 2 639 274 286 52 35 chr17 7157181 7157297 -88115354 + MLT1B LTR MaLR 266 383 -7 2 639 531 214 145 0 chr17 7157526 7157643 -88115008 + B1_Mus2 SINE Alu 1 134 -13 2 639 216 0 0 0 chr17 7157643 7157667 -88114984 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2 639 249 337 28 37 chr17 7157762 7157870 -88114781 + ID_B1 SINE B4 33 139 -85 2 639 317 306 51 0 chr17 7157821 7157919 -88114732 + PB1D10 SINE Alu 9 111 -6 2 639 686 105 0 9 chr17 7157923 7158038 -88114613 + (TA)n Simple_repeat Simple_repeat 2 115 0 2 639 239 113 65 0 chr17 7158052 7158114 -88114537 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 2 639 1001 177 65 0 chr17 7158360 7158546 -88114105 - B3 SINE B2 0 216 19 2 639 798 41 0 0 chr17 7158554 7158652 -88113999 + (TCTA)n Simple_repeat Simple_repeat 1 98 0 2 639 783 178 7 0 chr17 7158652 7158787 -88113864 - B1_Mus1 SINE Alu -12 136 1 2 639 267 308 13 0 chr17 7162293 7162371 -88110280 - ID4_ SINE ID -3 80 2 2 639 454 321 40 48 chr17 7162652 7162904 -88109747 + L1M5 LINE L1 5527 5776 -403 2 639 189 0 0 0 chr17 7165143 7165164 -88107487 + (A)n Simple_repeat Simple_repeat 1 21 0 2 639 26 74 0 0 chr17 7165323 7165377 -88107274 + GC_rich Low_complexity Low_complexity 1 54 0 2 639 345 273 123 8 chr17 7167057 7167179 -88105472 + MLT1A LTR MaLR 239 374 0 2 639 261 241 25 12 chr17 7167375 7167455 -88105196 - MLT2B4 LTR ERVL -75 481 401 2 639 851 226 42 0 chr17 7167589 7167757 -88104894 + B3A SINE B2 1 175 -23 2 639 21 26 0 26 chr17 7167782 7167800 -88104851 + AT_rich Low_complexity Low_complexity 1 18 0 2 639 678 255 81 10 chr17 7167800 7167998 -88104653 + B3 SINE B2 2 213 -3 2 639 21 26 0 26 chr17 7167998 7168018 -88104633 + AT_rich Low_complexity Low_complexity 1 20 0 2 639 1307 268 85 34 chr17 7168036 7168508 -88104143 - RLTR20B3 LTR ERVK -56 521 26 2 639 461 246 101 47 chr17 7168635 7168784 -88103867 + ID_B1 SINE B4 68 224 0 2 639 295 282 117 31 chr17 7169185 7169313 -88103338 + MIR SINE MIR 11 149 -113 3 639 216 226 306 12 chr17 7169363 7169448 -88103203 - MIRm SINE MIR -146 130 21 3 639 247 242 118 21 chr17 7169510 7169603 -88103048 - MLT1A1 LTR MaLR -40 368 267 3 639 756 290 137 13 chr17 7169963 7170270 -88102381 + MER34A1 LTR ERV1 21 365 -222 3 639 253 191 215 43 chr17 7170281 7170374 -88102277 + MER34A1 LTR ERV1 457 565 -22 3 639 22 0 0 0 chr17 7171004 7171026 -88101625 + AT_rich Low_complexity Low_complexity 1 22 0 3 639 513 292 85 85 chr17 7171153 7171271 -88101380 + B4A SINE B4 97 222 -70 3 639 648 211 166 11 chr17 7171271 7171458 -88101193 + B3 SINE B2 1 216 0 3 639 513 292 85 85 chr17 7171458 7171515 -88101136 + B4A SINE B4 223 272 -20 3 639 25 0 0 0 chr17 7171925 7171950 -88100701 + AT_rich Low_complexity Low_complexity 1 25 0 3 639 1198 75 0 0 chr17 7172366 7172513 -88100138 - B1_Mus1 SINE Alu 0 148 2 3 639 213 167 48 0 chr17 7172599 7172641 -88100010 + B3A SINE B2 1 44 -154 3 639 645 291 78 3 chr17 7172911 7173194 -88099457 + L1ME2 LINE L1 5588 5891 -273 3 639 315 322 45 32 chr17 7173206 7173363 -88099288 + L1ME2 LINE L1 5940 6098 -66 3 639 251 295 240 24 chr17 7173374 7173499 -88099152 + RSINE1 SINE B4 2 153 -12 3 639 691 287 188 37 chr17 7173690 7174116 -88098535 + RMER5 LTR ERV1 45 534 0 3 639 251 295 107 133 chr17 7174175 7174445 -88098206 + ORR1E LTR MaLR 97 359 0 3 639 555 274 0 0 chr17 7174467 7174580 -88098071 + RSINE1 SINE B4 3 115 -50 3 639 248 279 48 6 chr17 7176325 7176432 -88096219 - L1MC4 LINE L1 -1206 6836 6644 3 639 27 87 0 0 chr17 7176432 7176501 -88096150 + AT_rich Low_complexity Low_complexity 1 69 0 3 639 2817 129 32 22 chr17 7176512 7176973 -88095678 + RMER4A LTR ERVK 1 466 0 3 639 694 247 13 7 chr17 7176982 7177133 -88095518 - RSINE1 SINE B4 -1 164 13 3 639 276 289 72 32 chr17 7177507 7177632 -88095019 - MLT1G3 LTR MaLR -2 593 464 3 639 1151 62 14 0 chr17 7178045 7178190 -88094461 + B1_Mus2 SINE Alu 1 147 0 3 639 366 242 50 55 chr17 7178715 7178880 -88093771 + MTEa LTR MaLR 205 372 -7 3 639 262 289 82 10 chr17 7179161 7179259 -88093392 - MLT1G3 LTR MaLR -237 137 33 3 639 255 246 116 0 chr17 7179250 7179319 -88093332 - MLT1G3 LTR MaLR -330 78 2 3 639 191 62 0 59 chr17 7181383 7181417 -88091234 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 3 639 516 186 61 10 chr17 7181440 7181538 -88091113 + B1_Mur1 SINE Alu 45 147 -2 3 639 309 242 15 0 chr17 7181548 7181614 -88091037 - Arthur1A DNA Tip100 -65 112 46 3 639 250 314 22 34 chr17 7181765 7181854 -88090797 + MER92C LTR ERV1 58 145 -409 3 639 362 256 11 0 chr17 7182231 7182321 -88090330 + RMER30 DNA MER1_type 112 202 0 3 639 213 39 0 0 chr17 7183806 7183832 -88088819 + (TG)n Simple_repeat Simple_repeat 2 27 0 3 639 236 77 26 0 chr17 7184139 7184178 -88088473 + (TC)n Simple_repeat Simple_repeat 1 40 0 3 639 1053 85 0 0 chr17 7184193 7184334 -88088317 - B1_Mus2 SINE Alu -2 145 5 3 639 1628 210 44 30 chr17 7185839 7186021 -88086630 - ORR1D1 LTR MaLR -4 375 177 3 639 207 0 0 0 chr17 7186021 7186044 -88086607 + (GA)n Simple_repeat Simple_repeat 2 24 0 3 639 1628 202 42 12 chr17 7186044 7186221 -88086430 - ORR1D1 LTR MaLR -198 176 1 3 639 338 254 43 71 chr17 7186229 7186334 -88086317 - MLT1B LTR MaLR -289 178 73 3 639 375 23 0 0 chr17 7186822 7186866 -88085785 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 639 228 163 0 0 chr17 7187870 7187913 -88084738 + (TATG)n Simple_repeat Simple_repeat 4 46 0 3 639 994 191 34 19 chr17 7188685 7188893 -88083758 - B3 SINE B2 -5 211 1 3 639 206 250 0 0 chr17 7188901 7188953 -88083698 + (TAAA)n Simple_repeat Simple_repeat 4 55 0 3 639 460 264 84 15 chr17 7190461 7190592 -88082059 - U4 snRNA snRNA -1 144 5 3 639 198 0 0 0 chr17 7191205 7191227 -88081424 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 3 639 1083 59 0 0 chr17 7191227 7191363 -88081288 - B1_Mus1 SINE Alu -11 137 2 3 639 459 299 111 44 chr17 7191478 7191679 -88080972 - L1MC2 LINE L1 -140 6204 5977 3 639 5194 136 45 104 chr17 7191679 7192722 -88079929 - RLTR13C1 LTR ERVK 0 983 3 3 639 459 299 111 44 chr17 7192722 7192835 -88079816 - L1MC2 LINE L1 -368 5976 5869 3 639 673 255 62 31 chr17 7194988 7195182 -88077469 - B3 SINE B2 -10 206 7 3 639 351 65 0 0 chr17 7195182 7195228 -88077423 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 639 539 255 36 48 chr17 7196225 7196390 -88076261 - RSINE1 SINE B4 0 165 3 3 639 242 300 38 48 chr17 7196582 7196687 -88075964 + MLT1A0 LTR MaLR 91 194 -171 3 639 839 197 13 13 chr17 7197132 7197281 -88075370 + B1_Mur1 SINE Alu 1 149 0 3 639 229 310 24 81 chr17 7197172 7197295 -88075356 + RLTR25B LTR ERVK 442 557 -471 3 639 441 0 0 0 chr17 7197559 7197608 -88075043 + (CTG)n Simple_repeat Simple_repeat 1 49 0 3 639 246 32 0 0 chr17 7200876 7200907 -88071744 + (TCTCTG)n Simple_repeat Simple_repeat 2 32 0 3 639 205 195 0 24 chr17 7201579 7201621 -88071030 + GA-rich Low_complexity Low_complexity 1 41 0 3 639 497 194 0 46 chr17 7201704 7201812 -88070839 - B1_Mur3 SINE Alu 0 149 47 3 639 319 330 53 44 chr17 7202814 7202831 -88069820 - RSINE1 SINE B4 0 165 152 3 639 261 0 0 0 chr17 7202831 7202860 -88069791 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 639 319 330 53 44 chr17 7202860 7202956 -88069695 - RSINE1 SINE B4 -14 151 51 3 639 865 66 220 44 chr17 7204626 7204785 -88067866 - B2_Mm2 SINE B2 -8 187 1 3 639 373 318 71 93 chr17 7205273 7205569 -88067082 - RMER13A LTR ERVK -43 865 591 3 639 886 269 85 59 chr17 7205632 7206017 -88066634 - RMER13A LTR ERVK -468 392 2 3 639 337 335 94 0 chr17 7206995 7207165 -88065486 - L1MC4a LINE L1 -1250 6632 6447 3 639 492 184 0 0 chr17 7208824 7208922 -88063729 + (TA)n Simple_repeat Simple_repeat 1 98 0 3 79 419 244 206 0 chr17 7208924 7209055 -88063596 - RSINE1 SINE B4 -4 161 4 3 640 1001 226 124 28 chr17 7211311 7211602 -88061049 - MTD LTR MaLR -17 402 84 3 640 194 300 0 16 chr17 7212453 7212514 -88060137 - MER5B DNA MER1_type -6 172 113 3 640 328 295 57 0 chr17 7212709 7212814 -88059837 + PB1D9 SINE Alu 10 120 0 3 640 234 0 0 0 chr17 7212851 7212877 -88059774 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 3 640 279 286 0 0 chr17 7212965 7213049 -88059602 - L1ME2z LINE L1 -76 6368 6285 3 640 607 232 32 44 chr17 7213144 7213302 -88059349 + RSINE1 SINE B4 4 159 -6 3 640 578 196 62 9 chr17 7213423 7213536 -88059115 - MTD LTR MaLR -251 119 1 3 640 210 197 306 16 chr17 7213588 7213650 -88059001 - PB1D10 SINE Alu -21 96 17 3 640 1040 149 6 6 chr17 7213717 7213886 -88058765 + URR1B DNA MER1_type 57 225 0 3 640 578 262 21 21 chr17 7214175 7214319 -88058332 + Lx9 LINE L1 6561 6704 -940 3 640 833 205 12 12 chr17 7215377 7215540 -88057111 - B3A SINE B2 0 198 36 3 640 286 253 326 0 chr17 7215894 7215989 -88056662 - RSINE1 SINE B4 -38 127 2 3 640 243 88 0 0 chr17 7216714 7216748 -88055903 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 640 411 38 0 0 chr17 7216748 7216800 -88055851 + (GA)n Simple_repeat Simple_repeat 1 53 0 3 640 211 203 65 48 chr17 7216800 7216862 -88055789 - B3A SINE B2 -134 64 2 3 640 491 320 164 63 chr17 7217939 7218226 -88054425 - MTEa LTR MaLR -62 317 2 3 640 223 357 0 41 chr17 7218441 7218514 -88054137 + RSINE1 SINE B4 3 72 -93 3 640 297 0 0 0 chr17 7218554 7218587 -88054064 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 640 495 0 0 0 chr17 7218587 7218641 -88054010 + (GA)n Simple_repeat Simple_repeat 2 56 0 3 640 276 344 61 2 chr17 7219369 7219554 -88053097 - MER57D LTR ERV1 -164 247 45 3 640 698 251 279 12 chr17 7219648 7219906 -88052745 + ORR1D2 LTR MaLR 1 327 -43 3 640 1322 77 44 0 chr17 7219921 7220102 -88052549 - B2_Mm2 SINE B2 -6 189 1 3 640 2682 97 16 10 chr17 7220115 7220499 -88052152 + RMER12 LTR ERVK 1 386 -936 3 640 1441 65 43 0 chr17 7220500 7220685 -88051966 + B2_Mm2 SINE B2 1 193 -2 3 640 4971 61 12 5 chr17 7220692 7221348 -88051303 - L1_Mur1 LINE L1 -484 5402 4742 3 640 2027 134 34 6 chr17 7221348 7221671 -88050980 + Lx3_Mus LINE L1 6666 6997 -12 3 640 449 254 35 61 chr17 7221732 7221918 -88050733 - RNLTR23 LTR ERVK 0 642 484 3 640 2272 71 16 0 chr17 7222187 7222496 -88050155 + RMER12 LTR ERVK 402 715 -607 3 640 3911 75 2 52 chr17 7222612 7223172 -88049479 - Lx3_Mus LINE L1 0 7009 6478 3 640 534 261 60 0 chr17 7223812 7223946 -88048705 - ID_B1 SINE B4 0 224 83 3 640 273 289 81 6 chr17 7223951 7224111 -88048540 + L1MA6 LINE L1 6102 6273 -27 3 640 402 21 0 0 chr17 7224681 7224728 -88047923 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 640 315 0 0 0 chr17 7225767 7225802 -88046849 + (TC)n Simple_repeat Simple_repeat 2 36 0 3 640 332 284 191 34 chr17 7226198 7226402 -88046249 - MLT1C LTR MaLR -60 407 172 3 640 503 204 10 14 chr17 7226578 7226880 -88045771 + (TG)n Simple_repeat Simple_repeat 1 300 0 3 640 216 0 0 0 chr17 7228987 7229011 -88043640 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 640 324 227 136 27 chr17 7229156 7229287 -88043364 + MIRb SINE MIR 86 238 -30 3 640 288 0 0 0 chr17 7230659 7230691 -88041960 + (GA)n Simple_repeat Simple_repeat 2 33 0 3 640 515 259 43 7 chr17 7231201 7231341 -88041310 + RSINE1 SINE B4 21 165 0 3 640 236 341 57 0 chr17 7235624 7235712 -88036939 - MLT1A0 LTR MaLR 0 365 273 3 640 264 288 0 17 chr17 7235709 7235769 -88036882 - B1F1 SINE Alu -84 65 7 3 640 762 197 66 0 chr17 7236445 7236582 -88036069 - B1_Mur2 SINE Alu -2 147 2 3 640 574 231 44 156 chr17 7236614 7236819 -88035832 - B3A SINE B2 -16 182 1 3 640 531 0 0 0 chr17 7238542 7238601 -88034050 + (GA)n Simple_repeat Simple_repeat 2 60 0 4 640 341 55 36 0 chr17 7239782 7239837 -88032814 + (TTTTTG)n Simple_repeat Simple_repeat 4 60 0 4 640 829 66 207 0 chr17 7239844 7239965 -88032686 - B1_Mus1 SINE Alu -1 147 2 4 640 279 0 0 0 chr17 7240606 7240637 -88032014 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 640 207 175 0 0 chr17 7241387 7241444 -88031207 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 640 215 219 0 0 chr17 7241503 7241544 -88031107 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 640 710 326 16 42 chr17 7241574 7241763 -88030888 - B4A SINE B4 -86 206 23 4 640 358 251 172 23 chr17 7243071 7243290 -88029361 + L1ME1 LINE L1 4243 4491 -1655 4 640 378 286 34 89 chr17 7243311 7243457 -88029194 + RSINE1 SINE B4 3 140 -25 4 640 384 22 0 0 chr17 7243468 7243513 -88029138 + (CCA)n Simple_repeat Simple_repeat 3 47 0 4 640 926 232 37 20 chr17 7243545 7243791 -88028860 + L1_Rod LINE L1 4953 5202 -645 4 640 288 0 0 0 chr17 7243805 7243837 -88028814 + (TAA)n Simple_repeat Simple_repeat 2 33 0 4 640 44 0 0 0 chr17 7243841 7243885 -88028766 + AT_rich Low_complexity Low_complexity 1 44 0 4 640 453 240 183 55 chr17 7243893 7244163 -88028488 + L1_Rod LINE L1 5202 5518 -362 4 640 383 353 40 59 chr17 7244273 7244526 -88028125 + L1ME1 LINE L1 4579 4826 -1320 4 640 400 242 18 44 chr17 7244583 7244710 -88027941 + L1ME1 LINE L1 4823 4946 -1200 4 640 3404 287 64 58 chr17 7244716 7244992 -88027659 + Lx7 LINE L1 4137 4385 -1495 4 640 2828 67 78 0 chr17 7244992 7245363 -88027288 + MTB LTR MaLR 1 400 0 4 640 3404 287 64 58 chr17 7245363 7246659 -88025992 + Lx7 LINE L1 4386 5719 -161 4 640 382 295 68 60 chr17 7246913 7247165 -88025486 + Lx7 LINE L1 5756 6009 -1687 4 640 535 317 178 9 chr17 7247175 7247464 -88025187 + L1ME1 LINE L1 5390 5716 -463 4 640 345 24 0 0 chr17 7247464 7247506 -88025145 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 640 535 317 178 9 chr17 7247506 7247649 -88025002 + L1ME1 LINE L1 5717 5895 -284 4 640 431 255 230 30 chr17 7247732 7247897 -88024754 + ID_B1 SINE B4 7 204 -20 4 640 540 286 129 18 chr17 7248173 7248397 -88024254 + MER2 DNA MER2_type 10 258 -87 4 640 391 288 88 40 chr17 7248587 7248837 -88023814 + MamRep434 DNA TcMar 159 420 -6 4 640 233 269 119 40 chr17 7249603 7249804 -88022847 - L1MB1 LINE L1 -22 6167 5951 4 640 219 69 0 0 chr17 7250235 7250264 -88022387 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4 640 489 284 53 37 chr17 7250814 7251004 -88021647 + MLT1A0 LTR MaLR 1 193 -172 4 640 221 250 0 0 chr17 7251673 7251717 -88020934 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 640 1116 81 7 0 chr17 7252447 7252595 -88020056 + B2_Mm1a SINE B2 1 149 -44 4 640 384 40 0 0 chr17 7252595 7252645 -88020006 + (CATA)n Simple_repeat Simple_repeat 3 52 0 4 640 243 0 0 0 chr17 7252754 7252781 -88019870 + (TTCA)n Simple_repeat Simple_repeat 4 30 0 4 640 388 300 219 37 chr17 7252977 7253223 -88019428 - MLT1B LTR MaLR -73 317 27 4 640 3203 61 2 5 chr17 7254161 7254558 -88018093 - MTA_Mm LTR MaLR 0 396 1 4 640 317 203 31 0 chr17 7254692 7254756 -88017895 - ID4 SINE ID -14 69 4 4 640 2152 153 58 51 chr17 7254806 7255220 -88017431 - MTC LTR MaLR 0 421 5 4 640 1106 43 0 7 chr17 7255220 7255359 -88017292 + B1_Mus1 SINE Alu 11 148 0 4 640 340 279 44 0 chr17 7255760 7255896 -88016755 + (TATG)n Simple_repeat Simple_repeat 2 143 0 4 640 609 306 5 48 chr17 7257057 7257263 -88015388 - B3A SINE B2 0 198 2 4 640 431 268 39 47 chr17 7258661 7258790 -88013861 + RSINE1 SINE B4 38 165 0 4 640 2713 43 62 0 chr17 7259365 7259690 -88012961 - ORR1A1 LTR MaLR -1 345 1 4 640 548 158 0 0 chr17 7259793 7259869 -88012782 + tRNA-Lys-AAG tRNA tRNA 1 76 0 4 640 261 0 0 0 chr17 7260225 7260254 -88012397 + (CAG)n Simple_repeat Simple_repeat 1 29 0 4 640 423 0 0 0 chr17 7260436 7260483 -88012168 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 640 23 33 0 0 chr17 7261236 7261266 -88011385 + AT_rich Low_complexity Low_complexity 1 30 0 4 640 869 146 7 14 chr17 7261332 7261471 -88011180 + B1_Mur4 SINE Alu 1 138 -12 4 640 459 0 0 0 chr17 7261474 7261525 -88011126 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 4 640 366 23 0 0 chr17 7261620 7261663 -88010988 + (CATA)n Simple_repeat Simple_repeat 1 43 0 4 640 533 172 35 0 chr17 7261861 7261948 -88010703 + RCHARR1 DNA MER1_type 3 92 -882 4 640 623 299 94 39 chr17 7262081 7262313 -88010338 + RCHARR1 DNA MER1_type 253 497 -477 4 640 505 256 68 0 chr17 7262313 7262430 -88010221 + RSINE1 SINE B4 3 127 -38 4 640 26 30 0 0 chr17 7262450 7262483 -88010168 + AT_rich Low_complexity Low_complexity 1 33 0 4 640 1148 82 0 0 chr17 7262491 7262638 -88010013 + B1_Mus1 SINE Alu 1 147 -1 4 640 644 275 0 7 chr17 7262654 7262793 -88009858 + ID_B1 SINE B4 87 224 0 4 640 1598 219 95 41 chr17 7262812 7263274 -88009377 + RCHARR1 DNA MER1_type 481 967 -7 4 640 542 280 47 12 chr17 7263660 7263830 -88008821 + MLT1C LTR MaLR 289 464 -3 4 640 485 250 50 50 chr17 7264889 7265028 -88007623 - B1F SINE Alu 0 149 11 4 640 634 248 14 0 chr17 7264908 7265049 -88007602 - ID_B1 SINE B4 -12 212 70 4 640 242 342 0 77 chr17 7265091 7265208 -88007443 + Tigger14a DNA MER2_type 89 196 -128 4 640 1977 100 3 71 chr17 7265818 7266142 -88006509 - ORR1A2 LTR MaLR -2 325 24 4 640 608 325 78 25 chr17 7266724 7267043 -88005608 + MER82 DNA MER2_type 283 618 -35 4 640 999 207 20 5 chr17 7267592 7267791 -88004860 - B3 SINE B2 -14 202 1 4 640 927 297 161 34 chr17 7267838 7268219 -88004432 - L1MB3 LINE L1 -47 6136 5717 4 640 249 234 16 0 chr17 7268219 7268283 -88004368 - ID4_ SINE ID -17 66 2 4 640 927 293 167 27 chr17 7268283 7268900 -88003751 - L1MB3 LINE L1 -467 5716 5008 4 640 1957 199 19 31 chr17 7268904 7269323 -88003328 + MTD LTR MaLR 1 414 -5 4 640 1143 289 88 45 chr17 7269327 7270159 -88002492 - L1MB3 LINE L1 -1138 5002 4135 4 640 2091 182 52 27 chr17 7270276 7270365 -88002286 - L1_Rod LINE L1 -6410 762 669 4 640 3033 128 56 40 chr17 7270365 7270763 -88001888 - RLTR11A2 LTR ERVK 0 527 123 4 640 270 0 0 0 chr17 7270763 7270793 -88001858 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 640 3033 128 56 40 chr17 7270793 7270913 -88001738 - RLTR11A2 LTR ERVK -405 122 1 4 640 2091 182 52 27 chr17 7270913 7271269 -88001382 - L1_Rod LINE L1 -6504 668 306 4 640 559 162 48 0 chr17 7271271 7271376 -88001275 - URR1B DNA MER1_type 0 225 116 4 640 21 0 0 0 chr17 7271526 7271547 -88001104 + AT_rich Low_complexity Low_complexity 1 21 0 4 640 186 43 0 0 chr17 7271989 7272012 -88000639 + (GAAA)n Simple_repeat Simple_repeat 4 26 0 4 640 330 234 198 39 chr17 7272012 7272194 -88000457 + L1M4b LINE L1 1762 1972 -5362 4 640 303 319 151 13 chr17 7272288 7272460 -88000191 - MLT1A0 LTR MaLR -141 233 50 4 640 297 276 51 0 chr17 7272496 7272594 -88000057 - MLT1A1 LTR MaLR -7 401 299 4 640 1829 154 16 74 chr17 7272842 7273277 -87999374 - RMER17C LTR ERVK 0 410 1 4 640 351 300 151 147 chr17 7273564 7274339 -87998312 - Charlie2a DNA MER1_type -130 2731 1954 4 640 620 273 101 36 chr17 7274856 7275103 -87997548 - MLT2D LTR ERVL -50 364 102 4 640 1891 146 90 44 chr17 7275102 7275467 -87997184 + MTC LTR MaLR 21 402 -19 4 640 752 69 0 10 chr17 7276074 7276176 -87996475 + B2_Mm2 SINE B2 1 101 -94 4 640 207 0 0 0 chr17 7276202 7276225 -87996426 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 4 640 207 0 0 0 chr17 7276236 7276259 -87996392 + (GA)n Simple_repeat Simple_repeat 2 24 0 4 640 233 220 0 0 chr17 7276933 7276983 -87995668 + L1MB5 LINE L1 6115 6164 -10 4 640 2302 103 69 14 chr17 7277250 7277596 -87995055 - MT2B LTR ERVL -235 366 2 4 640 443 107 0 13 chr17 7279135 7279211 -87993440 + (TG)n Simple_repeat Simple_repeat 2 76 0 4 640 457 300 104 85 chr17 7279300 7279570 -87993081 - B4 SINE B4 -17 275 1 4 640 450 65 0 0 chr17 7279663 7279725 -87992926 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 640 261 301 42 21 chr17 7279990 7280085 -87992566 - MIR SINE MIR -79 183 87 4 640 399 284 73 0 chr17 7280287 7280396 -87992255 - RSINE1 SINE B4 -26 139 23 4 640 1824 127 64 67 chr17 7281400 7281730 -87990921 - ORR1A4 LTR MaLR 0 329 1 4 640 32 0 0 0 chr17 7282644 7282676 -87989975 + AT_rich Low_complexity Low_complexity 1 32 0 4 640 464 117 0 13 chr17 7282942 7283020 -87989631 + (TATG)n Simple_repeat Simple_repeat 4 80 0 4 640 661 265 0 45 chr17 7283025 7283179 -87989472 - RSINE1 SINE B4 -14 151 5 4 640 300 224 45 96 chr17 7284956 7285134 -87987517 + HAL1-2a_MD LINE L1 2346 2514 -510 4 640 417 266 52 17 chr17 7285710 7285825 -87986826 + B1_Mur1 SINE Alu 18 136 -13 4 640 1041 70 27 8 chr17 7286813 7287074 -87985577 + (TG)n Simple_repeat Simple_repeat 1 266 0 4 640 617 128 8 23 chr17 7288042 7288170 -87984481 + GA-rich Low_complexity Low_complexity 2 127 0 4 640 743 301 18 96 chr17 7288625 7288897 -87983754 - B4A SINE B4 -38 254 4 4 640 763 296 68 121 chr17 7291200 7291773 -87980878 + RMER20B LTR ERVK 19 611 -16 4 640 305 283 19 9 chr17 7292381 7292488 -87980163 + PB1D10 SINE Alu 3 110 -7 4 640 240 299 39 0 chr17 7292494 7292571 -87980080 + ID4_ SINE ID 1 80 -3 4 640 195 72 47 23 chr17 7292580 7292623 -87980028 + (GAGAA)n Simple_repeat Simple_repeat 3 46 0 4 640 310 229 120 40 chr17 7292660 7292760 -87979891 + PB1D10 SINE Alu 9 116 -1 4 640 701 272 42 14 chr17 7294754 7294970 -87977681 - ID_B1 SINE B4 0 224 3 4 640 1003 142 7 0 chr17 7295029 7295177 -87977474 + B1_Mur4 SINE Alu 2 150 0 4 640 613 132 47 0 chr17 7295236 7295342 -87977309 + Lx5 LINE L1 6793 6903 -147 4 640 261 0 0 0 chr17 7295344 7295373 -87977278 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 640 396 0 0 0 chr17 7295373 7295416 -87977235 + (GA)n Simple_repeat Simple_repeat 1 44 0 4 640 367 214 83 0 chr17 7295437 7295521 -87977130 + ID_B1 SINE B4 94 184 -40 4 640 260 27 27 0 chr17 7295534 7295571 -87977080 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 5 640 1067 109 6 0 chr17 7295662 7295827 -87976824 + (TTTTC)n Simple_repeat Simple_repeat 5 170 0 5 640 1148 111 29 34 chr17 7297096 7297301 -87975350 - Lx LINE L1 0 6654 6451 5 640 1804 76 4 0 chr17 7297301 7297539 -87975112 - Lx LINE L1 -473 6181 5943 5 640 1098 132 6 11 chr17 7297539 7297715 -87974936 + URR1B DNA MER1_type 51 225 0 5 640 239 331 84 42 chr17 7297919 7298061 -87974590 + MER74A LTR ERVL 47 194 -364 5 640 433 233 0 46 chr17 7299427 7299535 -87973116 + PB1D10 SINE Alu 15 117 0 5 640 563 299 78 23 chr17 7301152 7301371 -87971280 + MLT1B LTR MaLR 113 343 -47 5 640 7864 45 5 0 chr17 7303988 7305241 -87967410 - L1Md_F3 LINE L1 0 6584 5326 5 640 1806 170 84 11 chr17 7305626 7305816 -87966835 - RMER17C LTR ERVK -1 409 216 5 640 360 0 0 0 chr17 7305816 7305856 -87966795 + (GA)n Simple_repeat Simple_repeat 2 41 0 5 640 1806 170 84 11 chr17 7305856 7306046 -87966605 - RMER17C LTR ERVK -195 215 2 5 640 1133 114 6 17 chr17 7307761 7307939 -87964712 - B2_Mm2 SINE B2 -18 177 2 5 640 301 147 23 128 chr17 7307944 7308030 -87964621 + L1ME4a LINE L1 6043 6119 -5 5 640 1184 51 0 0 chr17 7309693 7309831 -87962820 - B1_Mus2 SINE Alu -9 138 1 5 640 512 68 0 14 chr17 7311403 7311477 -87961174 + (TC)n Simple_repeat Simple_repeat 1 73 0 5 640 424 215 32 0 chr17 7311640 7311733 -87960918 - PB1D10 SINE Alu -21 96 1 5 640 315 297 79 0 chr17 7311748 7311849 -87960802 - MLT1C LTR MaLR -2 465 357 5 640 572 339 30 22 chr17 7312057 7312289 -87960362 + Tigger5 DNA MER2_type 3 236 -2170 5 640 254 290 75 11 chr17 7312288 7312382 -87960269 + Tigger5 DNA MER2_type 2290 2389 -17 5 640 1924 153 71 73 chr17 7314029 7314424 -87958227 - ORR1B1 LTR MaLR 0 394 1 5 640 1437 269 147 58 chr17 7315201 7315990 -87956661 + RMER13A LTR ERVK 2 860 0 5 640 618 276 139 16 chr17 7316462 7316720 -87955931 - RMER15 LTR ERVL 0 575 286 5 640 271 216 65 103 chr17 7316748 7316903 -87955748 - RMER15 LTR ERVL -425 150 2 5 640 2661 185 76 2 chr17 7317300 7317841 -87954810 - Lx5 LINE L1 0 7050 6470 5 640 4683 115 31 13 chr17 7317833 7318583 -87954068 - L1_Mur2 LINE L1 -409 5468 4706 5 640 1368 79 10 21 chr17 7318917 7319110 -87953541 + B2_Mm2 SINE B2 1 191 -4 5 640 718 273 166 86 chr17 7319369 7319718 -87952933 - MTE2a LTR MaLR -2 377 1 5 640 815 294 99 21 chr17 7319844 7320219 -87952432 - L1MB3 LINE L1 -218 5965 5562 5 640 332 204 0 0 chr17 7320268 7320322 -87952329 - HAL1-3A_ME LINE L1 -830 2028 1975 5 640 532 191 15 15 chr17 7320322 7320455 -87952196 + (TATG)n Simple_repeat Simple_repeat 4 136 0 5 640 243 0 0 0 chr17 7322382 7322409 -87950242 + (T)n Simple_repeat Simple_repeat 1 27 0 5 640 1267 134 5 0 chr17 7322633 7322827 -87949824 + B2_Mm2 SINE B2 1 195 0 5 640 510 277 118 11 chr17 7325211 7325397 -87947254 + Cheshire DNA MER1_type 40 245 -2175 5 640 694 189 17 22 chr17 7325586 7325916 -87946735 + GA-rich Low_complexity Low_complexity 1 328 0 5 640 3662 193 113 20 chr17 7327598 7328422 -87944229 + Lx9 LINE L1 6606 7479 -165 5 640 345 100 0 0 chr17 7328422 7328472 -87944179 + (CAT)n Simple_repeat Simple_repeat 1 50 0 5 640 3662 193 113 20 chr17 7328472 7328577 -87944074 + Lx9 LINE L1 7480 7620 -24 5 640 289 297 131 89 chr17 7329330 7329544 -87943107 - MLT1C LTR MaLR -231 236 14 5 640 395 319 27 68 chr17 7331370 7331518 -87941133 - B1F SINE Alu -5 144 3 5 640 249 342 113 27 chr17 7331857 7332185 -87940466 - L1MDa LINE L1 -5343 1290 935 5 640 296 239 113 17 chr17 7332435 7332550 -87940101 - L1MDa LINE L1 -6396 237 112 5 640 485 265 113 72 chr17 7332608 7332964 -87939687 + ORR1D2 LTR MaLR 6 379 0 5 640 331 304 0 0 chr17 7334439 7334518 -87938133 - ID4 SINE ID 0 83 5 5 640 21 0 0 0 chr17 7334798 7334819 -87937832 + AT_rich Low_complexity Low_complexity 1 21 0 5 640 1460 198 4 4 chr17 7335197 7335446 -87937205 + MTD LTR MaLR 1 249 -170 5 640 3142 106 32 52 chr17 7335446 7335943 -87936708 + Lx LINE L1 6161 6647 -7 5 640 522 350 68 79 chr17 7336827 7337028 -87935623 - MTEa LTR MaLR -17 362 185 5 640 2256 169 124 105 chr17 7337028 7337122 -87935529 - MT2B LTR ERVL 0 601 558 5 640 291 114 0 0 chr17 7337122 7337166 -87935485 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 640 2256 169 124 105 chr17 7337166 7337661 -87934990 - MT2B LTR ERVL -44 557 1 5 640 522 350 68 79 chr17 7337661 7337825 -87934826 - MTEa LTR MaLR -195 184 1 5 640 627 266 153 17 chr17 7337936 7338177 -87934474 - MLT1A0 LTR MaLR -8 357 84 5 640 687 236 142 11 chr17 7338650 7338826 -87933825 + B3 SINE B2 1 199 -17 5 640 1356 54 15 66 chr17 7338995 7339193 -87933458 + B2_Mm2 SINE B2 1 188 -7 5 640 242 296 36 27 chr17 7339315 7339426 -87933225 + L1M6 LINE L1 1346 1457 -5039 5 641 1937 112 30 82 chr17 7340065 7340395 -87932256 + ORR1B1 LTR MaLR 40 352 -42 5 641 1408 64 12 0 chr17 7340395 7340568 -87932083 + B2_Mm1t SINE B2 1 175 -18 5 641 287 143 20 0 chr17 7340613 7340662 -87931989 - ORR1B1 LTR MaLR 0 394 345 5 641 180 0 0 0 chr17 7340662 7340682 -87931969 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 5 641 368 189 10 27 chr17 7340688 7340778 -87931873 - B2_Mm2 SINE B2 -95 121 30 5 641 1311 159 23 0 chr17 7340939 7341153 -87931498 + URR1B DNA MER1_type 7 225 0 5 641 198 0 0 0 chr17 7341871 7341893 -87930758 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 641 1276 35 0 0 chr17 7341953 7342098 -87930553 + B1_Mus2 SINE Alu 2 146 -1 5 641 366 139 0 0 chr17 7342099 7342171 -87930480 + (A)n Simple_repeat Simple_repeat 1 72 0 5 641 259 313 0 35 chr17 7344143 7344229 -87928422 + ID2 SINE ID 1 83 0 5 641 553 329 0 0 chr17 7344235 7344375 -87928276 + RSINE1 SINE B4 9 148 -17 5 641 561 30 0 0 chr17 7344382 7344449 -87928202 + (CATA)n Simple_repeat Simple_repeat 2 68 0 5 641 766 258 18 7 chr17 7344472 7344669 -87927982 + B4A SINE B4 87 292 0 5 641 285 196 120 63 chr17 7344667 7344825 -87927826 - RLTR21 LTR ERVK -318 1254 1088 5 641 249 337 54 0 chr17 7345424 7345516 -87927135 + RMER12 LTR ERVK 750 846 -476 5 641 582 276 32 32 chr17 7345771 7345958 -87926693 + B4 SINE B4 1 187 -105 5 641 211 194 0 0 chr17 7346001 7346037 -87926614 + G-rich Low_complexity Low_complexity 5 40 0 5 641 239 29 57 0 chr17 7346037 7346072 -87926579 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 5 641 941 108 12 18 chr17 7346526 7346695 -87925956 + (GGAGAA)n Simple_repeat Simple_repeat 6 173 0 5 641 1187 46 0 7 chr17 7348887 7349041 -87923610 - L1Md_A LINE L1 0 6582 6430 5 641 256 268 51 23 chr17 7349179 7349266 -87923385 - ID2 SINE ID -60 92 4 5 641 570 216 25 4 chr17 7349974 7350112 -87922539 - B1F SINE Alu -9 138 2 5 641 387 275 24 40 chr17 7350000 7350125 -87922526 - ID_B1 SINE B4 -30 194 72 5 641 23 0 0 0 chr17 7351611 7351634 -87921017 + AT_rich Low_complexity Low_complexity 1 23 0 5 641 827 163 7 33 chr17 7351640 7351792 -87920859 - B1_Mur2 SINE Alu 0 149 2 5 641 288 292 112 40 chr17 7351792 7351917 -87920734 - MLT1B LTR MaLR -40 350 217 5 641 249 254 0 0 chr17 7352521 7352576 -87920075 + C-rich Low_complexity Low_complexity 3 57 0 5 641 463 249 6 35 chr17 7352765 7352936 -87919715 + Lx9 LINE L1 7478 7643 -1 5 641 2186 129 9 12 chr17 7354581 7354927 -87917724 - RLTR11A2 LTR ERVK -3 524 180 5 641 564 225 0 0 chr17 7354972 7355191 -87917460 + (TG)n Simple_repeat Simple_repeat 1 219 0 5 641 183 143 0 0 chr17 7356849 7356877 -87915774 + L2 LINE L2 2064 2091 -1328 5 641 276 186 30 37 chr17 7357811 7357945 -87914706 + (CCCTG)n Simple_repeat Simple_repeat 3 135 0 5 641 1060 179 0 80 chr17 7358605 7358842 -87913809 + RMER6B LTR ERVK 17 234 -227 5 641 793 67 0 0 chr17 7358827 7358931 -87913720 + B1_Mus2 SINE Alu 44 147 0 5 641 1412 163 69 30 chr17 7358931 7359235 -87913416 + RMER6B LTR ERVK 138 453 -8 5 641 1238 48 0 0 chr17 7359335 7359481 -87913170 + B1_Mus1 SINE Alu 3 148 0 5 641 665 40 29 10 chr17 7359493 7359595 -87913056 + (GAA)n Simple_repeat Simple_repeat 2 105 0 5 641 725 76 9 0 chr17 7360523 7360628 -87912023 + (GA)n Simple_repeat Simple_repeat 1 106 0 5 641 446 279 100 128 chr17 7361193 7361583 -87911068 - MLT1B LTR MaLR -2 388 10 5 641 819 146 0 0 chr17 7361606 7361729 -87910922 + B1_Mus1 SINE Alu 5 127 -21 5 641 273 96 34 57 chr17 7361933 7362021 -87910630 + C-rich Low_complexity Low_complexity 2 87 0 5 641 392 342 82 43 chr17 7363057 7363362 -87909289 - L1MEg LINE L1 -2974 3172 2856 5 641 398 235 176 34 chr17 7363378 7363497 -87909154 + B1F SINE Alu 13 148 -1 5 641 629 337 153 44 chr17 7363596 7363748 -87908903 - L1MEg LINE L1 -3378 2768 2617 5 641 1162 76 0 0 chr17 7363748 7363893 -87908758 + B1_Mus2 SINE Alu 1 145 -2 5 641 792 83 0 0 chr17 7363893 7364002 -87908649 + (GAAA)n Simple_repeat Simple_repeat 2 110 0 5 641 629 337 153 44 chr17 7364002 7364441 -87908210 - L1MEg LINE L1 -3530 2616 2112 5 641 276 347 56 16 chr17 7364637 7364763 -87907888 - LTR40c LTR ERVL -247 218 88 5 641 446 282 101 57 chr17 7365057 7365215 -87907436 - RSINE1 SINE B4 0 165 1 5 641 313 371 60 73 chr17 7365567 7365980 -87906671 - L1MEg LINE L1 -4874 1368 961 5 641 2917 119 44 40 chr17 7367753 7368226 -87904425 - MT2C_Mm LTR ERVL 0 475 1 5 641 569 221 65 16 chr17 7368657 7368781 -87903870 + URR1A DNA MER1_type 2 131 -95 5 641 2123 126 70 0 chr17 7368743 7369099 -87903552 - RMER10B LTR ERVL -17 381 1 5 641 634 101 92 0 chr17 7369099 7369208 -87903443 + URR1A DNA MER1_type 81 199 -27 5 641 1502 178 49 43 chr17 7371671 7372018 -87900633 - RLTR15 LTR ERVK -10 349 1 5 641 198 103 0 0 chr17 7372041 7372070 -87900581 + (TCC)n Simple_repeat Simple_repeat 3 31 0 5 641 216 0 0 0 chr17 7376254 7376278 -87896373 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 641 701 215 29 7 chr17 7376378 7376514 -87896137 + RSINE1 SINE B4 2 140 -25 6 641 342 0 0 0 chr17 7376527 7376565 -87896086 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 641 43 81 0 0 chr17 7379975 7380074 -87892577 + AT_rich Low_complexity Low_complexity 1 99 0 6 641 181 82 15 76 chr17 7380074 7380140 -87892511 + (TTATA)n Simple_repeat Simple_repeat 2 63 0 6 641 198 91 0 0 chr17 7380150 7380183 -87892468 + (C)n Simple_repeat Simple_repeat 1 33 0 6 641 1130 58 0 0 chr17 7380226 7380363 -87892288 + B1_Mus1 SINE Alu 2 138 -10 6 641 185 266 11 112 chr17 7381219 7381308 -87891343 + L4 LINE RTE 1429 1508 -521 6 641 618 247 124 40 chr17 7381320 7381522 -87891129 + ID_B1 SINE B4 2 220 -4 6 641 23 0 0 0 chr17 7381575 7381598 -87891053 + GC_rich Low_complexity Low_complexity 1 23 0 6 641 366 107 0 0 chr17 7381599 7381655 -87890996 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 641 470 328 73 41 chr17 7384752 7384997 -87887654 + MLT1D LTR MaLR 18 270 -235 6 641 268 193 35 17 chr17 7385785 7385843 -87886808 + C-rich Low_complexity Low_complexity 2 60 0 6 641 214 233 48 32 chr17 7386411 7386473 -87886178 + GA-rich Low_complexity Low_complexity 5 67 0 6 641 291 54 0 0 chr17 7387123 7387160 -87885491 + (TATG)n Simple_repeat Simple_repeat 2 38 0 6 641 265 282 216 31 chr17 7387251 7387445 -87885206 + MLT1D LTR MaLR 330 559 -36 6 641 1450 261 13 19 chr17 7387995 7388401 -87884250 - Lx6 LINE L1 -566 6894 6494 6 641 880 236 56 7 chr17 7388412 7388606 -87884045 - Lx6 LINE L1 -1187 6273 6065 6 641 219 36 0 0 chr17 7388606 7388634 -87884017 + (TCCC)n Simple_repeat Simple_repeat 1 28 0 6 641 880 236 56 7 chr17 7388634 7388708 -87883943 - Lx6 LINE L1 -1396 6064 5992 6 641 342 0 0 0 chr17 7388795 7388833 -87883818 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 641 555 270 152 59 chr17 7388847 7389103 -87883548 - B4A SINE B4 -11 281 2 6 641 336 307 38 47 chr17 7389942 7389961 -87882690 + L1MEg LINE L1 1836 1851 -4233 6 641 1173 68 0 0 chr17 7389961 7390108 -87882543 + B1_Mus2 SINE Alu 1 147 0 6 641 336 307 38 47 chr17 7390108 7390194 -87882457 + L1MEg LINE L1 1852 1940 -4144 6 641 435 202 61 0 chr17 7390196 7390295 -87882356 + B4 SINE B4 123 227 -65 6 641 543 168 11 42 chr17 7390297 7390410 -87882241 + PB1D9 SINE Alu 2 110 -10 6 641 364 221 0 0 chr17 7390427 7390495 -87882156 + PB1D9 SINE Alu 47 114 -6 6 641 266 277 0 241 chr17 7390445 7390578 -87882073 + B4 SINE B4 183 283 -9 6 641 430 286 142 42 chr17 7391747 7392057 -87880594 - L1MB8 LINE L1 -217 5961 5621 6 641 469 257 80 2 chr17 7392187 7392332 -87880319 - L1MB8 LINE L1 -712 5462 5310 6 641 328 303 92 0 chr17 7392332 7392441 -87880210 - ORR1E LTR MaLR -238 121 3 6 641 317 325 154 0 chr17 7394829 7395063 -87877588 - L1MB8 LINE L1 -864 5282 5013 6 641 450 0 0 0 chr17 7395085 7395135 -87877516 + (GA)n Simple_repeat Simple_repeat 2 51 0 6 641 643 235 100 16 chr17 7395157 7395347 -87877304 - B4 SINE B4 -4 288 83 6 641 1659 31 0 20 chr17 7395361 7395557 -87877094 + B2_Mm1t SINE B2 2 193 0 6 641 265 316 26 13 chr17 7395594 7395671 -87876980 - ID SINE ID -140 84 7 6 641 1964 213 180 55 chr17 7396000 7396715 -87875936 - Lx7 LINE L1 0 7696 6892 6 641 206 75 50 0 chr17 7396998 7397038 -87875613 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 6 641 1636 42 0 0 chr17 7397927 7398119 -87874532 + B2_Mm1a SINE B2 1 192 -1 6 641 3180 145 19 11 chr17 7399149 7399672 -87872979 + RLTR11A2 LTR ERVK 1 527 0 6 641 1661 240 103 6 chr17 7399744 7400230 -87872421 - Lx8 LINE L1 -157 7316 6784 6 641 642 191 0 0 chr17 7400271 7400386 -87872265 - Lx8 LINE L1 -863 6610 6496 6 641 423 0 0 0 chr17 7400405 7400452 -87872199 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 641 300 253 69 46 chr17 7402387 7402474 -87870177 - ID_B1 SINE B4 -104 120 32 6 641 365 58 19 0 chr17 7402948 7403000 -87869651 + (TCTA)n Simple_repeat Simple_repeat 1 53 0 6 641 317 263 47 51 chr17 7403316 7403429 -87869222 - PB1 SINE Alu -15 112 4 6 641 24 0 0 0 chr17 7403494 7403518 -87869133 + AT_rich Low_complexity Low_complexity 1 24 0 6 641 486 0 0 0 chr17 7403721 7403775 -87868876 + (TC)n Simple_repeat Simple_repeat 2 55 0 6 641 189 0 0 0 chr17 7404183 7404204 -87868447 + (T)n Simple_repeat Simple_repeat 1 21 0 6 641 6252 54 21 0 chr17 7405014 7405776 -87866875 + L1_Mus1 LINE L1 5790 6567 0 6 641 437 0 19 0 chr17 7405990 7406043 -87866608 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 641 523 306 113 41 chr17 7407146 7407490 -87865161 + MLT1A LTR MaLR 3 371 -3 6 641 569 247 86 25 chr17 7409853 7410015 -87862636 + ID_B1 SINE B4 36 207 -17 6 641 596 314 62 16 chr17 7410179 7410435 -87862216 - RLTR26 LTR ERVK -189 453 186 6 641 225 119 0 0 chr17 7410561 7410603 -87862048 + (CAAG)n Simple_repeat Simple_repeat 2 43 0 6 641 276 91 0 0 chr17 7412371 7412415 -87860236 + (C)n Simple_repeat Simple_repeat 1 44 0 6 641 428 313 121 19 chr17 7412867 7413131 -87859520 - B4A SINE B4 0 292 2 6 641 22 56 0 0 chr17 7414590 7414626 -87858025 + AT_rich Low_complexity Low_complexity 1 36 0 6 641 445 265 0 57 chr17 7414742 7414866 -87857785 - B1F1 SINE Alu -1 148 32 6 641 315 312 11 28 chr17 7417468 7417646 -87855005 + (TG)n Simple_repeat Simple_repeat 1 175 0 6 641 1968 174 59 0 chr17 7422399 7422756 -87849895 - ORR1C1 LTR MaLR 0 378 1 6 641 289 117 33 0 chr17 7424491 7424551 -87848100 + (TTATA)n Simple_repeat Simple_repeat 1 62 0 6 641 221 232 0 18 chr17 7425365 7425422 -87847229 + GA-rich Low_complexity Low_complexity 2 57 0 6 641 787 247 0 26 chr17 7425891 7425902 -87846749 - B3A SINE B2 -5 193 183 6 641 215 61 0 29 chr17 7425902 7425936 -87846715 + (CACCAT)n Simple_repeat Simple_repeat 4 36 0 6 641 787 247 0 26 chr17 7425936 7426119 -87846532 - B3A SINE B2 -16 182 5 6 641 204 40 0 0 chr17 7426833 7426858 -87845793 + (TCTG)n Simple_repeat Simple_repeat 1 25 0 6 641 444 82 0 0 chr17 7426862 7426923 -87845728 + (TCCC)n Simple_repeat Simple_repeat 4 64 0 6 641 432 0 0 0 chr17 7426923 7426971 -87845680 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 641 23 33 0 0 chr17 7427043 7427073 -87845578 + AT_rich Low_complexity Low_complexity 1 30 0 6 641 1254 61 0 0 chr17 7427076 7427223 -87845428 + B1_Mus2 SINE Alu 1 147 0 6 641 470 265 131 15 chr17 7427339 7427474 -87845177 - Lx9 LINE L1 -149 7495 7342 6 641 180 0 0 0 chr17 7427474 7427494 -87845157 + (C)n Simple_repeat Simple_repeat 1 20 0 6 641 470 265 131 15 chr17 7427494 7427626 -87845025 - Lx9 LINE L1 -303 7341 7197 6 641 300 319 92 0 chr17 7427741 7427926 -87844725 + L1_Mur3 LINE L1 3975 4176 -1704 6 641 18184 69 29 12 chr17 7427961 7431460 -87841191 - L1VL4 LINE L1 -2 3557 1 6 641 230 264 11 58 chr17 7431706 7431895 -87840756 + RMER17C LTR ERVK 98 277 -133 6 641 390 57 0 0 chr17 7433309 7433362 -87839289 + (TTCC)n Simple_repeat Simple_repeat 2 54 0 6 641 227 278 90 96 chr17 7433937 7434104 -87838547 + MLT1D LTR MaLR 48 213 -292 6 641 641 282 34 33 chr17 7434014 7434206 -87838445 + ID_B1 SINE B4 62 261 -31 6 641 1245 34 0 7 chr17 7434231 7434377 -87838274 - B1_Mus1 SINE Alu -2 146 2 6 641 459 0 0 0 chr17 7435946 7435997 -87836654 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 641 293 186 0 231 chr17 7436549 7436640 -87836011 + PB1D7 SINE Alu 45 114 -6 6 641 419 273 8 83 chr17 7436777 7436932 -87835719 - MLT1A1 LTR MaLR 0 408 215 6 641 304 347 45 26 chr17 7437589 7437743 -87834908 - HAL1-3A_ME LINE L1 -419 2439 2283 6 641 306 125 0 0 chr17 7438040 7438088 -87834563 + URR1B DNA MER1_type 178 225 0 6 641 180 156 31 0 chr17 7438741 7438773 -87833878 - L3 LINE CR1 -4425 64 32 6 641 21 0 0 0 chr17 7439151 7439172 -87833479 + AT_rich Low_complexity Low_complexity 1 21 0 6 641 265 157 0 54 chr17 7439293 7439367 -87833284 + A-rich Low_complexity Low_complexity 3 72 0 6 641 2129 127 115 16 chr17 7439405 7439788 -87832863 + MTC LTR MaLR 1 421 0 6 641 704 302 52 105 chr17 7439966 7440366 -87832285 - MTE2a LTR MaLR 0 379 1 6 641 884 234 184 19 chr17 7442112 7442378 -87830273 + MTEb LTR MaLR 43 352 -27 6 641 1723 203 60 21 chr17 7442533 7442915 -87829736 + MTD LTR MaLR 23 419 0 6 641 399 226 19 0 chr17 7444045 7444204 -87828447 + (CA)n Simple_repeat Simple_repeat 2 163 0 6 641 492 18 0 0 chr17 7444611 7444668 -87827983 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 641 4936 95 22 48 chr17 7447880 7448651 -87824000 - RMER17A LTR ERVK 0 751 1 6 641 438 53 0 0 chr17 7451967 7452024 -87820627 + (TC)n Simple_repeat Simple_repeat 2 58 0 6 641 1149 44 0 0 chr17 7452136 7452271 -87820380 + B1_Mus1 SINE Alu 2 136 -12 6 641 234 0 0 0 chr17 7452272 7452298 -87820353 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 6 641 193 111 54 27 chr17 7452308 7452382 -87820269 + A-rich Low_complexity Low_complexity 1 76 0 6 641 327 324 39 0 chr17 7452382 7452484 -87820167 - U6 snRNA snRNA -1 106 1 6 641 195 42 0 0 chr17 7452536 7452560 -87820091 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 641 1244 28 7 0 chr17 7452565 7452710 -87819941 - B1_Mm SINE Alu 0 147 2 6 641 414 274 32 0 chr17 7453946 7454041 -87818610 + PB1D10 SINE Alu 1 98 -19 6 641 671 230 127 69 chr17 7454977 7455054 -87817597 + B4A SINE B4 1 76 -216 6 641 221 0 0 33 chr17 7455054 7455084 -87817567 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 6 641 671 230 127 69 chr17 7455084 7455282 -87817369 + B4A SINE B4 77 292 0 6 641 211 189 0 0 chr17 7459931 7459968 -87812683 + (TGG)n Simple_repeat Simple_repeat 1 37 0 6 641 9642 144 17 7 chr17 7460809 7462491 -87810160 + L1_Mus2 LINE L1 4213 5918 -648 6 641 230 378 56 0 chr17 7462661 7462804 -87809847 - MER20 DNA MER1_type -8 211 61 7 641 826 271 100 4 chr17 7463804 7464096 -87808555 + MTEa LTR MaLR 37 377 -2 7 641 874 148 242 0 chr17 7464144 7464326 -87808325 - URR1A DNA MER1_type 0 226 1 7 641 382 287 7 59 chr17 7466224 7466376 -87806275 + Charlie1a DNA MER1_type 1295 1438 -17 7 641 1019 39 0 0 chr17 7466856 7466986 -87805665 + B1_Mm SINE Alu 18 147 0 7 641 513 47 0 0 chr17 7468460 7468524 -87804127 + (TG)n Simple_repeat Simple_repeat 2 65 0 7 641 225 191 0 0 chr17 7468745 7468787 -87803864 - ID4_ SINE ID -39 44 3 7 641 224 264 130 19 chr17 7468788 7468896 -87803755 - B1F1 SINE Alu 0 149 30 7 641 299 296 47 53 chr17 7469326 7469476 -87803175 + B4A SINE B4 75 223 -69 7 641 756 154 0 16 chr17 7469356 7469481 -87803170 + B1_Mur4 SINE Alu 27 149 -1 7 642 212 77 0 25 chr17 7471227 7471267 -87801384 + (TTTTG)n Simple_repeat Simple_repeat 3 41 0 7 642 486 0 0 0 chr17 7472783 7472837 -87799814 + (CCA)n Simple_repeat Simple_repeat 3 56 0 7 642 830 104 8 0 chr17 7476505 7476570 -87796081 + (GGGA)n Simple_repeat Simple_repeat 4 69 0 7 642 1224 101 0 0 chr17 7476570 7476748 -87795903 + (GGAA)n Simple_repeat Simple_repeat 1 178 0 7 642 830 104 8 0 chr17 7476748 7476816 -87795835 + (GGGA)n Simple_repeat Simple_repeat 2 69 0 7 642 2422 111 15 3 chr17 7478929 7479271 -87793380 + ORR1A1 LTR MaLR 1 346 0 7 642 241 322 11 0 chr17 7480672 7480759 -87791892 + CT-rich Low_complexity Low_complexity 2 89 0 7 642 296 279 8 67 chr17 7481236 7481355 -87791296 + MIR SINE MIR 42 153 -55 7 642 711 290 51 54 chr17 7482374 7482688 -87789963 - MLT1B LTR MaLR -5 385 73 7 642 471 130 0 0 chr17 7484423 7484500 -87788151 + (CA)n Simple_repeat Simple_repeat 2 78 0 7 642 216 0 0 0 chr17 7485050 7485074 -87787577 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 642 217 308 0 0 chr17 7487404 7487456 -87785195 + PB1D10 SINE Alu 66 117 0 7 642 418 272 109 72 chr17 7487993 7488258 -87784393 + B4 SINE B4 1 275 -17 7 642 204 135 0 0 chr17 7488290 7488327 -87784324 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 642 571 239 7 48 chr17 7490194 7490339 -87782312 + RSINE1 SINE B4 27 165 0 7 642 214 387 6 29 chr17 7490339 7490367 -87782284 + B2_Mm2 SINE B2 26 194 -1 7 642 585 42 0 0 chr17 7491356 7491428 -87781223 + (CA)n Simple_repeat Simple_repeat 2 73 0 7 642 418 308 76 6 chr17 7495470 7495627 -87777024 - MER34A1 LTR ERV1 -419 168 1 7 642 357 263 16 49 chr17 7495954 7496138 -87776513 + CT-rich Low_complexity Low_complexity 2 179 0 7 642 1077 183 29 0 chr17 7497508 7497716 -87774935 - URR1B DNA MER1_type 0 225 12 7 642 358 299 48 100 chr17 7497716 7497753 -87774898 + CYRA11_Mm Unknown Y-chromosome 172 403 -214 7 642 389 304 188 5 chr17 7498709 7498917 -87773734 + L1MB3 LINE L1 5621 5866 -317 7 642 728 260 32 4 chr17 7498966 7499052 -87773599 + ID_B1 SINE B4 1 95 -197 7 642 307 314 62 62 chr17 7499052 7499198 -87773453 + B1_Mm SINE Alu 1 146 -1 7 642 337 293 175 12 chr17 7499201 7499367 -87773284 + L1MB3 LINE L1 5957 6149 -34 7 642 258 357 12 6 chr17 7501387 7501559 -87771092 + (TGGA)n Simple_repeat Simple_repeat 3 175 0 1 642 522 301 108 28 chr17 7501728 7501940 -87770711 + B4A SINE B4 58 286 -6 2 642 186 182 15 29 chr17 7501967 7502035 -87770616 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 642 309 207 0 0 chr17 7502064 7502122 -87770529 + HAL1-3A_ME LINE L1 1974 2031 -827 4 642 947 223 139 24 chr17 7502764 7503058 -87769593 - ORR1E LTR MaLR 0 359 32 5 642 207 238 55 73 chr17 7504400 7504509 -87768142 + L3 LINE CR1 4362 4468 -21 6 642 245 314 57 9 chr17 7508949 7509055 -87763596 - LTR40a LTR ERVL 0 519 409 7 642 225 309 0 0 chr17 7509213 7509268 -87763383 - LTR40a LTR ERVL -400 119 65 7 642 526 256 8 0 chr17 7510057 7510178 -87762473 + PB1 SINE Alu 1 122 -5 8 642 259 240 0 0 chr17 7510835 7510885 -87761766 + B1F SINE Alu 100 149 0 9 642 7734 28 2 1 chr17 7511691 7512627 -87760024 - L1Md_A LINE L1 -1 6581 5645 1 642 198 0 0 0 chr17 7512718 7512740 -87759911 + (T)n Simple_repeat Simple_repeat 1 22 0 1 642 322 282 13 0 chr17 7513837 7513915 -87758736 - ID4 SINE ID -4 79 1 1 642 1131 307 44 17 chr17 7514591 7514999 -87757652 - MTD LTR MaLR 0 419 1 1 642 346 344 59 18 chr17 7514999 7515220 -87757431 + MLT1A LTR MaLR 145 374 0 1 642 571 323 115 10 chr17 7515376 7515776 -87756875 + L1MB3 LINE L1 5498 5939 -244 1 642 326 163 195 12 chr17 7516097 7516192 -87756459 - MTE2a LTR MaLR -226 193 66 1 642 432 0 0 0 chr17 7520866 7520914 -87751737 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 642 2540 154 116 2 chr17 7521492 7521561 -87751090 - RLTR11A LTR ERVK 0 528 459 1 642 1149 29 0 0 chr17 7521561 7521698 -87750953 + (CA)n Simple_repeat Simple_repeat 2 138 0 1 642 2540 154 116 2 chr17 7521698 7522102 -87750549 - RLTR11A LTR ERVK -70 458 2 1 642 407 271 76 8 chr17 7522318 7522437 -87750214 + B1F SINE Alu 23 149 0 2 642 252 312 0 12 chr17 7522438 7522519 -87750132 + GA-rich Low_complexity Low_complexity 2 81 0 2 642 737 212 12 6 chr17 7523411 7523572 -87749079 + HAL1-2a_MD LINE L1 2345 2506 -518 2 642 319 265 13 87 chr17 7523835 7523984 -87748667 - RLTR42-int LTR ERVK -4191 1331 1194 2 642 1104 134 110 38 chr17 7525443 7525652 -87746999 - URR1A DNA MER1_type 0 226 3 2 642 1271 207 244 13 chr17 7526355 7526732 -87745919 + MT2A LTR ERVL 1 464 -69 2 642 239 204 30 120 chr17 7526705 7526735 -87745916 - Arthur1B DNA Tip100 -473 752 725 2 642 297 75 0 0 chr17 7526735 7526775 -87745876 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 642 239 204 30 120 chr17 7526775 7526844 -87745807 - Arthur1B DNA Tip100 -501 724 662 2 642 622 221 0 9 chr17 7526845 7527066 -87745585 + (TG)n Simple_repeat Simple_repeat 1 218 0 2 642 189 107 0 0 chr17 7527079 7527107 -87745544 + (TATATG)n Simple_repeat Simple_repeat 3 30 0 2 642 232 182 0 0 chr17 7527108 7527152 -87745499 + MT2A LTR ERVL 490 533 0 2 642 351 0 0 0 chr17 7530521 7530560 -87742091 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 642 253 214 39 10 chr17 7531822 7531926 -87740725 + CT-rich Low_complexity Low_complexity 3 109 0 3 642 3312 248 92 14 chr17 7531926 7532893 -87739758 + Lx7 LINE L1 6175 7216 -480 3 642 274 263 0 35 chr17 7533005 7533051 -87739600 + T-rich Low_complexity Low_complexity 97 141 0 3 642 228 67 0 0 chr17 7533051 7533081 -87739570 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 642 274 263 0 35 chr17 7533081 7533176 -87739475 + T-rich Low_complexity Low_complexity 6 96 0 3 642 770 31 10 0 chr17 7533177 7533274 -87739377 + (TAGA)n Simple_repeat Simple_repeat 2 99 0 3 642 195 177 32 16 chr17 7534333 7534396 -87738255 + CT-rich Low_complexity Low_complexity 4 67 0 3 642 1027 113 0 18 chr17 7534437 7534653 -87737998 + (TATG)n Simple_repeat Simple_repeat 1 212 0 3 642 381 198 0 0 chr17 7534653 7534734 -87737917 + (TG)n Simple_repeat Simple_repeat 2 82 0 3 642 612 287 21 22 chr17 7534761 7534941 -87737710 - B3A SINE B2 -9 186 1 4 642 233 250 31 83 chr17 7534997 7535093 -87737558 - B3A SINE B2 -80 118 28 4 642 298 289 33 0 chr17 7535029 7535119 -87737532 - B4A SINE B4 -199 93 1 4 642 408 67 0 0 chr17 7536154 7536214 -87736437 + (TCTG)n Simple_repeat Simple_repeat 1 60 0 4 642 491 277 337 4 chr17 7536242 7536497 -87736154 - ORR1D2 LTR MaLR 0 370 31 4 642 234 208 0 20 chr17 7536507 7536556 -87736095 + MTD LTR MaLR 1 48 -331 4 642 2218 48 0 11 chr17 7536604 7536880 -87735771 - L1Md_F2 LINE L1 0 6582 6310 4 642 463 291 38 108 chr17 7536882 7537040 -87735611 + MTD LTR MaLR 66 212 -207 4 642 441 36 0 0 chr17 7537041 7537096 -87735555 + (GA)n Simple_repeat Simple_repeat 1 55 0 4 642 357 24 0 0 chr17 7539193 7539235 -87733416 + (TCC)n Simple_repeat Simple_repeat 3 44 0 4 642 308 244 152 51 chr17 7539235 7539373 -87733278 - HAL1-3A_ME LINE L1 -423 2435 2284 4 642 264 273 15 0 chr17 7539374 7539440 -87733211 + CT-rich Low_complexity Low_complexity 2 68 0 5 642 324 273 106 21 chr17 7539441 7539583 -87733068 - HAL1-3A_ME LINE L1 -420 2438 2285 5 642 204 267 0 0 chr17 7539589 7539634 -87733017 + CT-rich Low_complexity Low_complexity 3 47 0 5 642 649 214 179 0 chr17 7539646 7539819 -87732832 - ID_B1 SINE B4 -19 205 2 5 642 25 65 0 0 chr17 7540170 7540216 -87732435 + AT_rich Low_complexity Low_complexity 1 46 0 5 642 477 148 0 0 chr17 7541034 7541115 -87731536 + (TG)n Simple_repeat Simple_repeat 1 81 0 5 642 1457 225 119 24 chr17 7542148 7542517 -87730134 - MTD LTR MaLR -14 405 2 5 642 189 0 0 0 chr17 7542744 7542765 -87729886 + (T)n Simple_repeat Simple_repeat 1 21 0 5 642 403 295 82 15 chr17 7544236 7544339 -87728312 - L1MEd LINE L1 -5454 665 555 5 642 3811 60 33 2 chr17 7544339 7544821 -87727830 - L1Md_F2 LINE L1 -1 6581 6085 5 642 403 295 82 15 chr17 7544821 7544913 -87727738 - L1MEd LINE L1 -5565 554 457 5 642 401 50 17 0 chr17 7545235 7545295 -87727356 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 642 1306 235 145 23 chr17 7545971 7546441 -87726210 + RLTR11A2 LTR ERVK 1 527 0 6 642 718 292 69 9 chr17 7546937 7547155 -87725496 - MTEa LTR MaLR 0 379 149 6 642 274 380 14 27 chr17 7547146 7547292 -87725359 - Tigger5 DNA MER2_type -2224 182 39 6 642 998 230 33 9 chr17 7548071 7548282 -87724369 + B3 SINE B2 1 216 0 6 642 265 263 48 48 chr17 7549922 7550026 -87722625 + L1MA7 LINE L1 6183 6286 -5 6 642 191 61 0 29 chr17 7550232 7550266 -87722385 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 642 1782 188 80 13 chr17 7551033 7551410 -87721241 - MTC-int LTR MaLR -3 1255 854 6 642 391 341 62 96 chr17 7551435 7551727 -87720924 + ORR1E LTR MaLR 75 356 -3 6 642 274 257 150 7 chr17 7551763 7551933 -87720718 - L1M3a LINE L1 -5143 1241 1122 6 642 301 244 21 43 chr17 7553389 7553483 -87719168 - L1M3a LINE L1 -5788 515 424 6 642 318 336 8 17 chr17 7553585 7553703 -87718948 - L1MB5 LINE L1 -75 6099 5983 7 642 1160 268 116 6 chr17 7553737 7554064 -87718587 + MTE2b LTR MaLR 2 364 -15 7 642 531 43 0 0 chr17 7554387 7554457 -87718194 + (TG)n Simple_repeat Simple_repeat 1 70 0 7 642 754 259 82 67 chr17 7554480 7554749 -87717902 - B4A SINE B4 -19 273 1 7 642 1110 51 0 0 chr17 7554773 7554910 -87717741 + B1_Mus1 SINE Alu 6 142 -6 7 642 236 30 30 0 chr17 7554912 7554945 -87717706 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 7 642 739 248 277 9 chr17 7557165 7557385 -87715266 + B4A SINE B4 1 279 -13 7 642 257 156 25 25 chr17 7557679 7557758 -87714893 + (TATG)n Simple_repeat Simple_repeat 4 82 0 7 642 644 158 23 17 chr17 7557839 7558013 -87714638 + (TATG)n Simple_repeat Simple_repeat 4 178 0 7 642 313 182 27 27 chr17 7558046 7558193 -87714458 + (TG)n Simple_repeat Simple_repeat 2 148 0 7 642 407 276 0 4 chr17 7559715 7559948 -87712703 + (TG)n Simple_repeat Simple_repeat 1 231 0 8 642 723 274 44 67 chr17 7559950 7560247 -87712404 - B4A SINE B4 -2 290 1 8 642 232 298 18 65 chr17 7560543 7560656 -87711995 + G-rich Low_complexity Low_complexity 4 110 0 8 642 407 19 0 19 chr17 7560656 7560709 -87711942 + (TG)n Simple_repeat Simple_repeat 1 52 0 8 642 232 298 18 65 chr17 7560709 7560764 -87711887 + G-rich Low_complexity Low_complexity 111 164 0 8 642 436 250 16 32 chr17 7561435 7561559 -87711092 + MTEb LTR MaLR 240 361 -18 8 642 684 164 62 8 chr17 7562956 7563085 -87709566 - B1_Mur2 SINE Alu 0 149 14 8 642 249 242 62 62 chr17 7562999 7563096 -87709555 - MT2B LTR ERVL -344 257 161 8 642 278 281 134 43 chr17 7563512 7563698 -87708953 - ORR1E LTR MaLR -80 279 77 8 642 29 28 0 0 chr17 7564916 7564952 -87707699 + AT_rich Low_complexity Low_complexity 1 36 0 8 642 188 261 0 61 chr17 7566240 7566289 -87706362 + L3b LINE CR1 192 237 -245 9 642 411 78 0 0 chr17 7567446 7567510 -87705141 + (TG)n Simple_repeat Simple_repeat 2 65 0 9 642 432 284 32 98 chr17 7567512 7567705 -87704946 - B4A SINE B4 -29 263 84 9 642 248 85 43 0 chr17 7567705 7567752 -87704899 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 9 642 824 279 162 0 chr17 7568452 7568699 -87703952 + B4A SINE B4 2 288 -4 9 642 211 208 21 0 chr17 7568748 7568796 -87703855 + (CA)n Simple_repeat Simple_repeat 2 50 0 9 642 414 225 0 0 chr17 7569553 7569664 -87702987 + (TG)n Simple_repeat Simple_repeat 2 112 0 9 642 392 371 49 4 chr17 7570631 7570896 -87701755 + L1MD3 LINE L1 7719 7995 0 9 642 549 269 194 20 chr17 7571393 7571640 -87701011 - B4A SINE B4 -2 290 1 9 642 468 0 0 0 chr17 7572423 7572475 -87700176 + (CA)n Simple_repeat Simple_repeat 2 53 0 9 642 633 285 13 6 chr17 7578544 7578703 -87693948 - U1 snRNA snRNA -2 163 4 1 642 692 237 70 12 chr17 7579080 7579251 -87693400 + B3 SINE B2 1 181 -35 1 642 387 0 0 0 chr17 7579258 7579301 -87693350 + (TC)n Simple_repeat Simple_repeat 1 43 0 1 642 399 21 0 0 chr17 7579301 7579348 -87693303 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 642 277 238 35 81 chr17 7579365 7579452 -87693199 + MTE2b LTR MaLR 16 98 -281 1 642 2537 142 50 72 chr17 7580023 7580540 -87692111 + RLTR28 LTR ERVL 1 506 -18 1 642 309 329 114 36 chr17 7582579 7582746 -87689905 + HAL1-3A_ME LINE L1 2260 2439 -419 1 642 1452 79 26 0 chr17 7582748 7582938 -87689713 + B2_Mm2 SINE B2 1 195 0 1 642 606 63 0 0 chr17 7582950 7583029 -87689622 + (GAAA)n Simple_repeat Simple_repeat 4 82 0 1 642 252 208 38 0 chr17 7583029 7583082 -87689569 + GA-rich Low_complexity Low_complexity 2 56 0 1 642 283 356 25 25 chr17 7584235 7584356 -87688295 + Charlie5 DNA MER1_type 1 121 -2503 1 642 746 236 14 0 chr17 7584438 7584582 -87688069 + B1_Mur1 SINE Alu 2 147 -2 1 642 771 245 123 25 chr17 7584861 7585104 -87687547 + B4 SINE B4 1 267 -25 1 642 361 85 0 0 chr17 7585638 7585685 -87686966 - MTD LTR MaLR -8 411 365 1 642 1535 130 181 65 chr17 7585691 7585881 -87686770 + ORR1C2 LTR MaLR 3 202 -182 1 642 633 49 0 0 chr17 7585881 7585962 -87686689 + (TC)n Simple_repeat Simple_repeat 2 82 0 1 642 1535 130 181 65 chr17 7585962 7586109 -87686542 + ORR1C2 LTR MaLR 203 379 -5 1 642 1455 232 56 26 chr17 7586114 7586455 -87686196 - MTD LTR MaLR -66 353 3 1 642 1016 214 35 0 chr17 7588458 7588659 -87683992 + B3 SINE B2 3 210 -6 1 642 25 0 0 0 chr17 7590560 7590585 -87682066 + GC_rich Low_complexity Low_complexity 1 25 0 1 642 261 252 0 0 chr17 7590864 7590983 -87681668 + (TG)n Simple_repeat Simple_repeat 2 120 0 1 642 273 272 28 37 chr17 7591485 7591592 -87681059 + MER92C LTR ERV1 288 393 -161 1 642 315 275 83 51 chr17 7594016 7594173 -87678478 - L1MC4a LINE L1 -1978 5904 5743 1 642 964 205 59 15 chr17 7594542 7594745 -87677906 + B4A SINE B4 26 237 -55 1 642 858 84 0 8 chr17 7594882 7595002 -87677649 + B1_Mus2 SINE Alu 24 142 -5 1 642 252 59 0 0 chr17 7595005 7595039 -87677612 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 642 239 280 13 39 chr17 7595427 7595505 -87677146 + ID_B1 SINE B4 73 148 -76 1 642 293 250 102 20 chr17 7595447 7595545 -87677106 + PB1D10 SINE Alu 12 117 0 1 642 251 207 0 0 chr17 7595909 7595967 -87676684 + GA-rich Low_complexity Low_complexity 1 58 0 1 642 664 163 50 27 chr17 7595988 7596133 -87676518 + MTD LTR MaLR 261 419 0 1 642 16014 64 61 1 chr17 7596133 7599298 -87673353 + L1VL4 LINE L1 24 3377 -182 1 642 538 217 49 16 chr17 7599299 7599421 -87673230 + B1_Mur2 SINE Alu 18 143 -6 1 642 386 245 9 37 chr17 7599566 7599678 -87672973 + B1F SINE Alu 6 140 -9 1 642 390 212 50 0 chr17 7599696 7599776 -87672875 + BC1_Mm scRNA scRNA 1 84 -68 1 642 350 42 21 0 chr17 7599817 7599865 -87672786 + (GGGA)n Simple_repeat Simple_repeat 3 51 0 1 642 582 15 0 0 chr17 7600594 7600661 -87671990 + (TCCC)n Simple_repeat Simple_repeat 4 70 0 1 642 297 343 37 0 chr17 7601963 7602071 -87670580 + MER34A LTR ERV1 6 117 -454 1 80 558 274 84 115 chr17 7602172 7602589 -87670062 + RMER10A LTR ERVL 18 421 -21 1 643 540 0 0 0 chr17 7603026 7603086 -87669565 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 643 4908 48 10 0 chr17 7603093 7603674 -87668977 + LTRIS_Mus LTR ERV1 1 587 0 1 643 5345 197 65 40 chr17 7603674 7604472 -87668179 - RMER12B LTR ERVK -213 1191 368 1 643 1454 65 16 5 chr17 7604472 7604658 -87667993 + B2_Mm2 SINE B2 2 189 -6 1 643 5345 202 60 25 chr17 7604658 7605011 -87667640 - RMER12B LTR ERVK -1037 367 2 1 643 487 295 98 15 chr17 7605125 7605201 -87667450 + MLT1A LTR MaLR 15 93 -281 1 643 2069 180 16 5 chr17 7605201 7605263 -87667388 - ORR1C1 LTR MaLR 0 378 314 1 643 396 0 0 0 chr17 7605263 7605307 -87667344 + (GA)n Simple_repeat Simple_repeat 2 45 0 1 643 2069 180 16 5 chr17 7605307 7605618 -87667033 - ORR1C1 LTR MaLR -65 313 2 1 643 487 295 98 15 chr17 7605618 7605744 -87666907 + MLT1A LTR MaLR 94 233 -141 1 643 635 302 24 0 chr17 7606111 7606323 -87666328 + L1MA6 LINE L1 3945 4161 -1982 1 643 1649 210 15 80 chr17 7606336 7606743 -87665908 + ORR1B1 LTR MaLR 13 393 -1 1 643 450 279 67 106 chr17 7606756 7606880 -87665771 + L1MA6 LINE L1 4214 4337 -1803 1 643 728 144 65 92 chr17 7606880 7607033 -87665618 + B1_Mur4 SINE Alu 1 149 -1 1 643 450 279 67 106 chr17 7607033 7607400 -87665251 + L1MA6 LINE L1 4338 4686 -1454 1 643 759 298 131 34 chr17 7607507 7608547 -87664104 + L1MA6 LINE L1 4677 5826 -474 1 643 2132 160 15 48 chr17 7608688 7609083 -87663568 + RLTR14 LTR ERV1 1 382 0 1 643 3262 169 19 67 chr17 7609126 7609767 -87662884 + RLTR18 LTR ERVK 5 614 -2 1 643 1671 191 115 8 chr17 7609802 7610176 -87662475 + RMER5 LTR ERV1 121 534 0 1 643 809 204 129 18 chr17 7610902 7611113 -87661538 - ORR1E LTR MaLR -138 232 6 1 643 243 329 72 40 chr17 7611215 7611367 -87661284 - MIRc SINE MIR -84 184 28 1 643 235 250 88 0 chr17 7612063 7612131 -87660520 - MER34A1 LTR ERV1 -79 508 435 1 643 290 324 68 34 chr17 7612174 7612321 -87660330 - MER45B DNA Tip100 -836 204 53 1 643 1953 189 58 5 chr17 7612393 7612791 -87659860 + MTC LTR MaLR 1 419 -2 1 643 838 188 73 26 chr17 7612895 7613086 -87659565 - Lx5 LINE L1 0 7050 6851 1 643 861 216 18 0 chr17 7613072 7613243 -87659408 + Lx5 LINE L1 6565 6738 -312 1 643 310 269 59 92 chr17 7613248 7613367 -87659284 + RSINE1 SINE B4 50 164 -1 1 643 1902 120 66 13 chr17 7613372 7613677 -87658974 - ORR1A4 LTR MaLR -8 321 1 1 643 22 0 0 0 chr17 7613682 7613704 -87658947 + AT_rich Low_complexity Low_complexity 1 22 0 1 643 195 42 0 0 chr17 7613756 7613780 -87658871 + (TC)n Simple_repeat Simple_repeat 1 24 0 1 643 278 315 41 0 chr17 7613968 7614041 -87658610 - AluG_3 SINE Alu -97 214 139 1 643 2622 49 9 12 chr17 7614285 7614613 -87658038 - ORR1A2 LTR MaLR 0 327 1 1 643 3099 154 18 2 chr17 7616063 7616556 -87656095 + Lx4A LINE L1 6487 6987 -71 1 643 495 322 7 34 chr17 7618212 7618333 -87654318 + B4A SINE B4 149 270 -22 1 643 339 25 0 0 chr17 7618333 7618373 -87654278 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 643 495 322 7 34 chr17 7618373 7618399 -87654252 + B4A SINE B4 271 292 0 1 643 287 222 0 36 chr17 7618462 7618518 -87654133 - ID4_ SINE ID -2 81 28 1 643 205 182 0 0 chr17 7618518 7618551 -87654100 + polypyrimidine Low_complexity Low_complexity 2 34 0 1 643 1129 62 7 7 chr17 7618556 7618702 -87653949 - B1_Mus1 SINE Alu -2 146 1 1 643 573 227 9 52 chr17 7618792 7618908 -87653743 + B1_Mur1 SINE Alu 7 117 -3 1 643 771 227 19 67 chr17 7619676 7619884 -87652767 + B3A SINE B2 1 198 0 1 643 1373 82 22 0 chr17 7619967 7620151 -87652500 + B2_Mm2 SINE B2 3 190 -5 1 643 1792 125 60 115 chr17 7620231 7620665 -87651986 + RMER17C LTR ERVK 1 410 0 1 643 207 0 0 0 chr17 7621242 7621265 -87651386 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 643 242 314 57 9 chr17 7622359 7622465 -87650186 - LTR40a LTR ERVL 0 519 409 1 643 225 309 0 0 chr17 7622623 7622678 -87649973 - LTR40a LTR ERVL -400 119 65 1 643 188 253 147 0 chr17 7622766 7622861 -87649790 + MIRm SINE MIR 33 141 -135 1 643 529 217 8 87 chr17 7623467 7623594 -87649057 + PB1 SINE Alu 1 117 0 1 643 249 296 0 0 chr17 7624233 7624296 -87648355 + B1F SINE Alu 55 149 0 1 643 240 35 0 0 chr17 7624546 7624575 -87648076 + (CACCC)n Simple_repeat Simple_repeat 3 31 0 1 643 221 57 0 28 chr17 7624609 7624645 -87648006 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 643 5099 39 2 0 chr17 7625570 7626164 -87646487 - L1Md_T LINE L1 0 6582 5988 1 643 7892 14 0 0 chr17 7626164 7627144 -87645507 + L1Md_T LINE L1 5003 5982 -600 1 643 231 346 13 0 chr17 7628247 7628325 -87644326 - ID4_ SINE ID -4 79 1 1 643 1121 304 44 17 chr17 7629001 7629409 -87643242 - MTD LTR MaLR 0 419 1 1 643 322 324 77 27 chr17 7629409 7629630 -87643021 + MLT1A0 LTR MaLR 134 365 0 1 643 596 324 118 10 chr17 7629786 7630185 -87642466 + L1MB3 LINE L1 5498 5939 -244 1 643 298 266 147 11 chr17 7630506 7630601 -87642050 - MTD LTR MaLR -226 193 86 1 643 233 295 76 76 chr17 7631658 7631790 -87640861 - MIRb SINE MIR -94 174 43 1 643 396 0 0 0 chr17 7635262 7635306 -87637345 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 643 2561 155 104 2 chr17 7635884 7635954 -87636697 - RLTR11A LTR ERVK 0 528 458 1 643 1323 72 0 0 chr17 7635954 7636134 -87636517 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 643 2561 155 104 2 chr17 7636134 7636542 -87636109 - RLTR11A LTR ERVK -71 457 3 1 643 410 271 76 8 chr17 7636758 7636877 -87635774 + B1F SINE Alu 23 149 0 1 643 275 296 0 12 chr17 7636877 7636959 -87635692 + GA-rich Low_complexity Low_complexity 2 82 0 1 643 780 145 0 0 chr17 7637854 7637985 -87634666 + (CCA)n Simple_repeat Simple_repeat 1 131 0 1 643 364 285 33 70 chr17 7638183 7638398 -87634253 - RLTR42-int LTR ERVK -4122 1400 1194 1 643 190 278 78 61 chr17 7638718 7638833 -87633818 - L4 LINE RTE -1574 455 339 1 643 378 0 0 0 chr17 7639992 7640034 -87632617 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 643 27 29 0 0 chr17 7640676 7640710 -87631941 + AT_rich Low_complexity Low_complexity 1 34 0 1 643 1247 48 0 0 chr17 7640718 7640864 -87631787 + B1_Mus2 SINE Alu 2 147 0 1 643 207 0 0 0 chr17 7640864 7640887 -87631764 + (A)n Simple_repeat Simple_repeat 1 23 0 1 643 226 220 60 0 chr17 7641026 7641076 -87631575 - L3 LINE CR1 -4384 105 53 1 643 709 287 136 85 chr17 7641121 7641475 -87631176 + MTEa LTR MaLR 1 372 -7 1 643 664 289 216 39 chr17 7641527 7641884 -87630767 - MER21B LTR ERV1 -374 489 70 1 643 276 238 132 36 chr17 7641933 7642016 -87630635 - MER21B LTR ERV1 -768 95 5 1 643 677 199 27 60 chr17 7642119 7642269 -87630382 - B1_Mur1 SINE Alu -3 146 2 2 643 325 176 162 0 chr17 7642472 7642546 -87630105 + Lx9 LINE L1 7094 7179 -465 2 643 1203 42 0 14 chr17 7642625 7642770 -87629881 + B1_Mus2 SINE Alu 1 143 -4 2 643 183 80 0 0 chr17 7642775 7642800 -87629851 + (GAA)n Simple_repeat Simple_repeat 2 26 0 2 643 198 103 0 0 chr17 7643226 7643255 -87629396 + (CGTG)n Simple_repeat Simple_repeat 1 29 0 2 643 1528 154 39 0 chr17 7643357 7643616 -87629035 + MTB_Mm LTR MaLR 4 272 -135 2 643 444 178 0 0 chr17 7644040 7644147 -87628504 + T-rich Low_complexity Low_complexity 1 107 0 2 643 851 124 0 0 chr17 7644147 7644268 -87628383 - B2_Mm2 SINE B2 -74 121 1 2 643 21 71 0 0 chr17 7644277 7644319 -87628332 + AT_rich Low_complexity Low_complexity 1 42 0 2 643 243 286 105 79 chr17 7644489 7644573 -87628078 - MLT1A0 LTR MaLR -11 354 262 2 643 1547 47 0 10 chr17 7644573 7644765 -87627886 - B2_Mm2 SINE B2 -1 194 5 2 643 243 286 105 79 chr17 7644765 7644801 -87627850 - MLT1A0 LTR MaLR -104 261 227 2 643 3476 32 4 136 chr17 7644801 7645303 -87627348 + RLTR10C LTR ERVK 1 436 0 2 643 243 286 105 79 chr17 7645303 7645371 -87627280 - MLT1A0 LTR MaLR -139 226 160 2 643 495 205 29 23 chr17 7645393 7645568 -87627083 + GA-rich Low_complexity Low_complexity 1 176 0 2 643 233 243 29 0 chr17 7645580 7645650 -87627001 + GA-rich Low_complexity Low_complexity 2 73 0 2 643 702 235 112 0 chr17 7645677 7645864 -87626787 - B3 SINE B2 -7 209 2 2 643 2343 193 134 97 chr17 7646184 7646298 -87626353 + RMER19A LTR ERVK 1 115 -622 2 643 1429 72 17 0 chr17 7646298 7646478 -87626173 + B2_Mm2 SINE B2 3 185 -10 2 643 2343 193 134 97 chr17 7646478 7646490 -87626161 + RMER19A LTR ERVK 116 116 -621 2 643 1231 54 0 0 chr17 7646490 7646637 -87626014 + B1_Mm SINE Alu 1 147 0 2 643 2343 193 134 97 chr17 7646637 7647179 -87625472 + RMER19A LTR ERVK 116 695 -42 2 643 197 282 12 0 chr17 7647311 7647396 -87625255 + CT-rich Low_complexity Low_complexity 1 86 0 2 643 390 242 100 10 chr17 7647397 7647497 -87625154 - RSINE1 SINE B4 -35 130 22 2 643 248 250 37 74 chr17 7647509 7647617 -87625034 - L1MC LINE L1 -500 5833 5730 2 643 323 167 198 11 chr17 7648204 7648295 -87624356 - PB1D10 SINE Alu -9 108 1 2 643 1187 75 0 0 chr17 7648580 7648727 -87623924 - B1_Mus2 SINE Alu 0 147 1 2 643 1145 284 36 94 chr17 7649226 7649673 -87622978 - MTC LTR MaLR 0 421 1 2 643 1364 86 11 5 chr17 7649775 7649962 -87622689 + B2_Mm1t SINE B2 2 189 -4 2 643 741 255 14 60 chr17 7649974 7650191 -87622460 + B3 SINE B2 5 211 -5 2 643 220 217 0 0 chr17 7650287 7650333 -87622318 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 643 1275 120 11 0 chr17 7651158 7651341 -87621310 + B2_Mm1t SINE B2 2 186 -7 2 643 291 28 0 0 chr17 7651367 7651403 -87621248 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2 643 1078 80 0 7 chr17 7651403 7651541 -87621110 - B1_Mus2 SINE Alu -10 137 1 2 643 1024 231 102 79 chr17 7651552 7651744 -87620907 - RLTR12B LTR ERVK -77 451 246 2 643 378 0 0 0 chr17 7651744 7651786 -87620865 + (TC)n Simple_repeat Simple_repeat 2 43 0 2 643 1024 231 102 79 chr17 7651786 7651888 -87620763 - RLTR12B LTR ERVK -283 245 157 2 643 2406 34 57 3 chr17 7651888 7652187 -87620464 - L1Md_F3 LINE L1 0 6584 6270 2 643 1024 231 102 79 chr17 7652187 7652282 -87620369 - RLTR12B LTR ERVK -372 156 52 2 643 236 279 73 0 chr17 7652802 7652870 -87619781 - PB1 SINE Alu -54 73 1 2 643 459 234 217 19 chr17 7654030 7654191 -87618460 - RMER15 LTR ERVL -43 532 340 2 643 1897 270 82 68 chr17 7654427 7654583 -87618068 - RMER15-int LTR ERVL -4 4995 4847 2 643 1174 67 6 6 chr17 7654583 7654749 -87617902 + (TTC)n Simple_repeat Simple_repeat 2 167 0 2 643 1059 81 0 0 chr17 7654752 7654888 -87617763 - B1_Mus1 SINE Alu -12 136 1 2 643 1897 270 82 68 chr17 7654888 7655077 -87617574 - RMER15-int LTR ERVL -153 4846 4651 2 643 4004 102 41 4 chr17 7655077 7655640 -87617011 - MT2B2 LTR ERVL 0 584 1 2 643 1897 270 82 68 chr17 7655640 7656023 -87616628 - RMER15-int LTR ERVL -349 4650 4252 2 643 5184 60 126 35 chr17 7656180 7656933 -87615718 - RLTR13B2 LTR ERVK 0 822 1 2 643 479 348 133 20 chr17 7656939 7657338 -87615313 - RMER15-int LTR ERVL -2799 2200 1757 2 643 216 0 0 0 chr17 7657575 7657599 -87615052 + (TCCC)n Simple_repeat Simple_repeat 2 25 0 2 643 336 331 39 0 chr17 7657599 7657726 -87614925 - RMER15-int LTR ERVL -3507 1492 1361 2 643 1788 303 72 25 chr17 7657961 7658679 -87613972 - RMER15-int LTR ERVL -3921 1078 327 2 643 568 218 188 54 chr17 7658717 7658940 -87613711 - Lx7 LINE L1 -375 7321 7069 2 643 231 163 0 44 chr17 7714516 7714561 -87558090 + GA-rich Low_complexity Low_complexity 6 48 0 2 643 1365 275 75 40 chr17 7714619 7715002 -87557649 - RMER5 LTR ERV1 0 534 140 2 643 2014 207 14 14 chr17 7715002 7715418 -87557233 - MTD LTR MaLR 0 419 4 2 643 1365 275 75 40 chr17 7715418 7715511 -87557140 - RMER5 LTR ERV1 -395 139 41 2 643 420 161 0 0 chr17 7715511 7715592 -87557059 + (CCAA)n Simple_repeat Simple_repeat 2 82 0 2 643 341 169 17 0 chr17 7716218 7716277 -87556374 + ORR1C2 LTR MaLR 2 61 -313 2 643 589 185 115 0 chr17 7716279 7716409 -87556242 + ORR1C2 LTR MaLR 240 384 0 2 643 1309 20 0 0 chr17 7716498 7716646 -87556005 - B1_Mus1 SINE Alu 0 148 1 2 643 408 71 273 144 chr17 7716646 7716768 -87555883 - B2_Mm2 SINE B2 -9 186 47 2 643 1344 90 11 0 chr17 7716819 7716996 -87555655 - B2_Mm1t SINE B2 -14 179 1 2 643 254 234 89 25 chr17 7717053 7717132 -87555519 - RSINE1 SINE B4 -79 86 3 2 643 1766 126 15 70 chr17 7717496 7717837 -87554814 + RLTRETN_Mm LTR ERVK 1 322 0 2 643 1369 89 17 0 chr17 7717901 7718080 -87554571 + B2_Mm2 SINE B2 4 185 -10 2 643 321 264 22 11 chr17 7718127 7718219 -87554432 - MER34B-int LTR ERV1 -2948 2408 2316 2 643 207 0 0 0 chr17 7718320 7718343 -87554308 + (TTTTTG)n Simple_repeat Simple_repeat 1 23 0 2 643 1194 68 0 0 chr17 7718343 7718490 -87554161 - B1_Mus1 SINE Alu 0 148 2 2 643 296 344 59 53 chr17 7718551 7718720 -87553931 - MER57E1 LTR ERV1 -202 170 1 2 643 413 282 149 40 chr17 7719153 7719167 -87553484 - RSINE1 SINE B4 0 165 154 2 643 369 0 0 0 chr17 7719167 7719208 -87553443 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2 643 413 282 149 40 chr17 7719208 7719341 -87553310 - RSINE1 SINE B4 -12 153 2 2 643 427 312 106 25 chr17 7719365 7719602 -87553049 + MLT1C LTR MaLR 72 327 -140 2 643 261 221 59 66 chr17 7719672 7719808 -87552843 - Lx8 LINE L1 0 7473 7339 2 643 357 100 37 12 chr17 7719811 7719892 -87552759 + (TCTCTG)n Simple_repeat Simple_repeat 2 84 0 2 643 417 118 59 0 chr17 7720802 7720870 -87551781 - L1_Mus4 LINE L1 -599 6037 5966 2 643 1098 90 84 0 chr17 7720870 7721048 -87551603 + Lx LINE L1 6458 6650 -4 2 643 254 217 346 9 chr17 7721184 7721291 -87551360 + RSINE1 SINE B4 2 144 -21 2 643 428 0 0 19 chr17 7721327 7721380 -87551271 + (TAA)n Simple_repeat Simple_repeat 2 53 0 2 643 468 0 0 0 chr17 7721402 7721454 -87551197 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 643 1296 20 0 0 chr17 7721553 7721699 -87550952 + B1_Mus2 SINE Alu 2 147 0 2 643 348 24 0 0 chr17 7721699 7721740 -87550911 + (A)n Simple_repeat Simple_repeat 1 41 0 2 643 1208 58 7 0 chr17 7721754 7721908 -87550743 + B2_Mm1t SINE B2 35 189 -4 2 643 232 284 0 15 chr17 7721925 7721993 -87550658 + GA-rich Low_complexity Low_complexity 2 68 0 2 643 360 225 0 23 chr17 7722768 7722900 -87549751 + (CA)n Simple_repeat Simple_repeat 2 130 0 2 643 450 346 48 13 chr17 7723115 7723346 -87549305 - MIR SINE MIR -2 260 22 2 643 182 243 129 0 chr17 7723426 7723496 -87549155 - MIRb SINE MIR -17 251 173 2 643 522 0 0 0 chr17 7723941 7723999 -87548652 + (TC)n Simple_repeat Simple_repeat 1 58 0 2 643 681 224 0 14 chr17 7724281 7724426 -87548225 + B1F SINE Alu 7 149 0 2 643 1078 201 39 5 chr17 7725104 7725309 -87547342 - B3 SINE B2 -4 212 1 2 643 873 150 0 7 chr17 7725976 7726117 -87546534 - URR1B DNA MER1_type -85 140 1 2 643 343 157 13 67 chr17 7726606 7726681 -87545970 + MER21B LTR ERV1 28 98 -765 2 643 328 271 87 72 chr17 7726681 7726794 -87545857 + MER77 LTR ERVL 74 261 -346 2 643 972 200 0 114 chr17 7727119 7727356 -87545295 - B3 SINE B2 -3 213 4 2 643 238 318 182 0 chr17 7728059 7728191 -87544460 + MLT1D LTR MaLR 1 156 -349 2 643 268 336 0 0 chr17 7728257 7728391 -87544260 + C-rich Low_complexity Low_complexity 4 137 0 2 643 225 0 0 0 chr17 7728485 7728510 -87544141 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2 643 965 217 246 7 chr17 7728510 7728801 -87543850 - MTEa LTR MaLR -16 363 3 2 643 639 310 61 43 chr17 7729691 7730089 -87542562 - L1MA5A LINE L1 -371 5929 5514 2 643 21 57 0 0 chr17 7730089 7730124 -87542527 + AT_rich Low_complexity Low_complexity 1 35 0 2 643 1021 204 19 33 chr17 7730152 7730365 -87542286 - B3 SINE B2 -6 210 1 2 643 204 298 0 45 chr17 7730491 7730579 -87542072 + MIR3 SINE MIR 119 202 -6 2 80 741 260 55 10 chr17 7733143 7733345 -87539306 + B3 SINE B2 2 212 -4 2 644 837 251 0 0 chr17 7733883 7734050 -87538601 - B3A SINE B2 -28 170 4 2 644 2090 110 106 18 chr17 7734130 7734527 -87538124 - RLTR44E LTR ERVK -20 432 1 2 644 1156 128 18 17 chr17 7734585 7734815 -87537836 - LTRIS5 LTR ERV1 0 512 217 2 644 285 294 71 56 chr17 7734922 7735048 -87537603 + MLT1A0 LTR MaLR 1 128 -246 2 644 289 295 123 25 chr17 7735106 7735237 -87537414 + MLT1A0 LTR MaLR 250 396 -12 2 644 357 110 13 27 chr17 7735326 7735401 -87537250 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 2 644 26 0 0 0 chr17 7736424 7736450 -87536201 + AT_rich Low_complexity Low_complexity 1 26 0 2 644 822 147 0 8 chr17 7736470 7736600 -87536051 - B3 SINE B2 -87 129 1 2 644 639 226 14 114 chr17 7736605 7736825 -87535826 - B3A SINE B2 0 198 1 2 644 472 306 63 2 chr17 7736886 7737154 -87535497 + L1_Mur3 LINE L1 3546 3844 -2302 2 644 822 212 0 6 chr17 7738005 7738162 -87534489 - B3A SINE B2 -42 156 1 2 644 241 235 0 19 chr17 7738566 7738618 -87534033 + CT-rich Low_complexity Low_complexity 3 53 0 2 644 354 286 29 0 chr17 7738656 7738761 -87533890 - B1F1 SINE Alu -38 111 4 2 644 252 356 73 30 chr17 7738761 7738825 -87533826 - B4 SINE B4 -197 95 25 3 644 1171 88 0 0 chr17 7739708 7739855 -87532796 - B1_Mus1 SINE Alu 0 148 2 3 644 279 0 0 0 chr17 7739873 7739904 -87532747 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 3 644 1192 56 0 0 chr17 7739904 7740048 -87532603 - B1_Mus1 SINE Alu -3 145 2 3 644 736 151 308 0 chr17 7740110 7740269 -87532382 - B3 SINE B2 -8 208 1 3 644 546 91 0 0 chr17 7740345 7740422 -87532229 + (TCTA)n Simple_repeat Simple_repeat 2 78 0 3 644 3505 209 49 92 chr17 7741761 7742194 -87530457 + Lx5 LINE L1 6272 6585 -473 3 644 1416 70 5 0 chr17 7742194 7742379 -87530272 + B2_Mm1t SINE B2 2 187 -6 3 644 3505 181 67 18 chr17 7742379 7742839 -87529812 + Lx5 LINE L1 6570 7042 -8 3 644 426 267 120 88 chr17 7742896 7743179 -87529472 - B4 SINE B4 0 292 1 3 644 5133 112 5 11 chr17 7743361 7744099 -87528552 + MERVL-int LTR ERVL 4 737 -4748 3 644 1573 91 4 0 chr17 7744141 7744372 -87528279 + ORR1A3 LTR MaLR 57 288 -38 3 644 232 301 18 89 chr17 7744375 7744543 -87528108 + L1VL1 LINE L1 237 392 -6030 3 644 393 273 50 7 chr17 7744670 7744810 -87527841 + L1Md_F LINE L1 664 809 -5807 3 644 1747 188 46 118 chr17 7744812 7745029 -87527622 + L1Md_F LINE L1 725 954 -5662 3 644 1259 51 98 38 chr17 7745029 7745212 -87527439 + L1_Mus1 LINE L1 6373 6566 -1 3 644 1747 188 46 118 chr17 7745212 7745226 -87527425 + L1Md_F LINE L1 955 955 -5661 3 644 1190 61 0 7 chr17 7745226 7745365 -87527286 + B1_Mus1 SINE Alu 1 139 -9 3 644 371 21 0 20 chr17 7745365 7745414 -87527237 + (CAAAC)n Simple_repeat Simple_repeat 2 49 0 3 644 1747 188 46 118 chr17 7745422 7745707 -87526944 + L1Md_F LINE L1 955 1205 -5411 3 644 25999 89 14 1 chr17 7745717 7746639 -87526012 + L1Md_F LINE L1 1108 2041 -3842 3 644 1576 62 0 0 chr17 7746639 7746831 -87525820 + B2_Mm1a SINE B2 1 192 -1 3 644 25999 89 10 1 chr17 7746831 7749609 -87523042 + L1Md_F LINE L1 2042 4854 -1029 3 644 2031 67 0 0 chr17 7749609 7749863 -87522788 + L1_Mus1 LINE L1 6313 6566 -1 3 644 349 62 0 0 chr17 7749865 7749913 -87522738 + ORR1A3 LTR MaLR 272 319 -7 3 644 21 0 0 0 chr17 7750539 7750560 -87522091 + AT_rich Low_complexity Low_complexity 1 21 0 3 644 2208 88 3 9 chr17 7751206 7751527 -87521124 + ORR1A2 LTR MaLR 1 319 -8 3 644 917 138 14 7 chr17 7751608 7751754 -87520897 - B1_Mm SINE Alu 0 147 1 3 644 201 250 61 53 chr17 7751778 7751892 -87520759 + L2 LINE L2 1401 1515 -1904 3 644 1190 55 0 14 chr17 7753128 7753276 -87519375 - B1_Mm SINE Alu -1 146 1 3 644 2194 159 180 22 chr17 7753369 7753470 -87519181 - RLTR20D LTR ERVK -2 566 477 3 644 405 0 0 0 chr17 7753470 7753515 -87519136 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 644 2194 159 180 22 chr17 7753515 7753902 -87518749 - RLTR20D LTR ERVK -92 476 3 3 644 795 236 11 33 chr17 7753907 7754091 -87518560 + B3 SINE B2 31 210 -6 3 644 1268 102 11 0 chr17 7755044 7755220 -87517431 - B2_Mm1t SINE B2 -14 179 2 3 644 1390 175 90 34 chr17 7755910 7756289 -87516362 + RLTR9F LTR ERVK 1 400 -15 3 644 1354 5 25 0 chr17 7756541 7756745 -87515906 + (TCTA)n Simple_repeat Simple_repeat 1 208 0 3 644 848 215 6 0 chr17 7757466 7757486 -87515165 - RSINE1 SINE B4 0 165 145 3 644 351 0 0 0 chr17 7757486 7757525 -87515126 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 644 848 215 6 0 chr17 7757525 7757667 -87514984 - RSINE1 SINE B4 -21 144 3 3 644 229 385 9 9 chr17 7758159 7758264 -87514387 + MIR3 SINE MIR 83 187 -21 3 644 684 221 22 14 chr17 7759542 7759680 -87512971 + B1F SINE Alu 11 149 0 3 644 229 186 23 0 chr17 7759804 7759847 -87512804 + G-rich Low_complexity Low_complexity 5 48 0 3 644 2096 270 115 13 chr17 7759946 7760730 -87511921 - Lx8 LINE L1 -5 7468 6605 3 644 212 271 17 17 chr17 7760730 7760790 -87511861 - ID4_ SINE ID 0 83 24 3 644 2516 201 25 23 chr17 7761171 7761690 -87510961 - Lx7 LINE L1 -1287 6409 5890 3 644 1567 148 83 24 chr17 7761694 7762033 -87510618 - ORR1B2 LTR MaLR -8 359 1 3 644 7451 161 29 53 chr17 7762051 7763339 -87509312 - Lx7 LINE L1 -4 5876 4599 3 644 3954 65 10 0 chr17 7763339 7763835 -87508816 + L1_Mus1 LINE L1 6067 6567 0 3 644 7451 161 29 53 chr17 7763835 7764015 -87508636 - Lx7 LINE L1 -1282 4598 4444 3 644 632 174 0 18 chr17 7765470 7765581 -87507070 - PB1D9 SINE Alu -6 114 6 3 644 687 145 31 0 chr17 7766910 7767206 -87505445 + (TCTA)n Simple_repeat Simple_repeat 1 305 0 3 644 606 253 40 7 chr17 7767210 7767361 -87505290 - RSINE1 SINE B4 -6 159 4 3 644 199 271 17 0 chr17 7767506 7767565 -87505086 + L3 LINE CR1 4427 4486 -3 3 644 210 128 0 0 chr17 7769459 7769498 -87503153 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 644 1064 257 14 21 chr17 7769509 7769799 -87502852 - B4A SINE B4 0 292 5 3 644 187 329 33 105 chr17 7769823 7769976 -87502675 + MIRb SINE MIR 116 257 -11 3 644 321 26 0 0 chr17 7772432 7772470 -87500181 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 644 192 77 0 0 chr17 7772729 7772755 -87499896 + (CAAG)n Simple_repeat Simple_repeat 2 27 0 3 644 441 0 0 0 chr17 7772871 7772920 -87499731 + (TCTG)n Simple_repeat Simple_repeat 4 52 0 3 644 478 316 36 18 chr17 7772933 7773155 -87499496 - L1MC4 LINE L1 -546 7496 7271 3 644 840 207 85 19 chr17 7773681 7773893 -87498758 - MTEb LTR MaLR 0 379 154 3 644 640 172 145 7 chr17 7774158 7774310 -87498341 - MTEa LTR MaLR -162 217 45 3 644 996 236 48 4 chr17 7774787 7775038 -87497613 + MTEa LTR MaLR 116 377 -2 3 644 495 244 48 82 chr17 7775074 7775221 -87497430 + RSINE1 SINE B4 24 165 0 3 644 947 174 67 71 chr17 7775271 7775481 -87497170 + B3 SINE B2 1 209 -7 3 644 585 0 0 0 chr17 7775492 7775557 -87497094 + (GA)n Simple_repeat Simple_repeat 1 65 0 3 644 185 0 40 0 chr17 7775729 7775754 -87496897 + (TTTTTG)n Simple_repeat Simple_repeat 6 31 0 3 644 2221 125 63 75 chr17 7776539 7776938 -87495713 - ORR1B1 LTR MaLR 0 394 1 3 644 1599 260 10 51 chr17 7778166 7778580 -87494071 + Lx5 LINE L1 6653 7049 -1 3 644 328 295 123 9 chr17 7780134 7780240 -87492411 + ID_B1 SINE B4 84 201 -23 3 644 719 209 11 97 chr17 7780283 7780458 -87492193 - RSINE1 SINE B4 -4 161 2 3 644 249 281 0 24 chr17 7780778 7780862 -87491789 + L1MEd LINE L1 986 1067 -5069 3 644 895 25 0 0 chr17 7780864 7780982 -87491669 + B1_Mus2 SINE Alu 30 147 0 3 644 183 42 0 0 chr17 7780984 7781008 -87491643 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 3 644 215 209 23 0 chr17 7781267 7781310 -87491341 + ID4 SINE ID 3 46 -37 3 644 225 0 0 0 chr17 7781331 7781356 -87491295 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 644 21 57 0 0 chr17 7781359 7781394 -87491257 + AT_rich Low_complexity Low_complexity 1 35 0 3 644 297 395 6 17 chr17 7781744 7781924 -87490727 + (TG)n Simple_repeat Simple_repeat 2 179 0 3 644 343 340 19 6 chr17 7781879 7782039 -87490612 + (TATATG)n Simple_repeat Simple_repeat 3 164 0 3 644 347 316 6 39 chr17 7782085 7782263 -87490388 + (TATATG)n Simple_repeat Simple_repeat 3 174 0 3 644 218 247 25 0 chr17 7782332 7782413 -87490238 + (TATATG)n Simple_repeat Simple_repeat 1 83 0 3 644 228 288 123 35 chr17 7782607 7782834 -87489817 + L1MEd LINE L1 2145 2391 -3755 3 644 1507 34 23 0 chr17 7782836 7783011 -87489640 + B2_Mm1a SINE B2 2 180 -13 3 644 233 0 62 0 chr17 7783011 7783043 -87489608 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 644 226 284 56 11 chr17 7783074 7783163 -87489488 + L1MEd LINE L1 2556 2648 -3498 3 644 374 264 152 0 chr17 7783346 7783471 -87489180 + Lx8 LINE L1 7215 7358 -115 3 644 970 211 0 5 chr17 7784256 7784442 -87488209 + ORR1A1 LTR MaLR 1 185 -161 3 644 317 88 175 0 chr17 7784433 7784490 -87488161 - ORR1A1-int LTR MaLR -1628 164 98 3 644 252 143 0 0 chr17 7785087 7785129 -87487522 + (A)n Simple_repeat Simple_repeat 1 42 0 3 644 27 29 0 0 chr17 7785260 7785294 -87487357 + AT_rich Low_complexity Low_complexity 1 34 0 3 644 1287 20 0 0 chr17 7786736 7786886 -87485765 + (TCTA)n Simple_repeat Simple_repeat 1 150 0 3 644 308 305 38 30 chr17 7786905 7787037 -87485614 + ORR1A1 LTR MaLR 247 379 0 3 644 2488 59 0 0 chr17 7787075 7787382 -87485269 - L1_Mus1 LINE L1 -1 6566 6260 3 644 564 56 0 0 chr17 7788234 7788306 -87484345 + (GGA)n Simple_repeat Simple_repeat 2 73 0 3 644 1015 213 46 0 chr17 7788334 7788550 -87484101 + MTE2b LTR MaLR 3 228 -151 3 644 1644 175 93 3 chr17 7788584 7788927 -87483724 + ORR1D1 LTR MaLR 1 374 0 3 644 322 298 43 9 chr17 7788927 7789030 -87483621 + MTE2b LTR MaLR 273 379 0 3 644 916 33 0 16 chr17 7789052 7789175 -87483476 - B1_Mus1 SINE Alu 0 148 28 3 644 221 377 26 0 chr17 7789479 7789556 -87483095 - ID4_ SINE ID 0 83 5 3 644 256 295 67 67 chr17 7789562 7789711 -87482940 - B1F1 SINE Alu 0 149 1 3 644 300 138 0 0 chr17 7789844 7789909 -87482742 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 644 443 181 127 13 chr17 7789916 7790028 -87482623 - B4A SINE B4 -2 290 168 3 644 471 18 0 0 chr17 7790375 7790431 -87482220 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 644 427 283 77 52 chr17 7790442 7790636 -87482015 - L1MA4 LINE L1 -368 5932 5734 3 644 347 236 91 59 chr17 7790637 7790784 -87481867 - B3A SINE B2 -2 214 58 3 644 472 84 12 12 chr17 7790970 7791054 -87481597 + (TG)n Simple_repeat Simple_repeat 1 84 0 3 644 24 67 0 0 chr17 7791826 7791871 -87480780 + AT_rich Low_complexity Low_complexity 1 45 0 3 644 598 339 58 0 chr17 7792079 7792250 -87480401 - B3A SINE B2 -16 182 2 3 644 529 344 72 32 chr17 7792250 7792565 -87480086 + MLT1I LTR MaLR 19 341 -70 3 644 1741 147 81 67 chr17 7792565 7792753 -87479898 - ORR1C1 LTR MaLR 0 378 181 3 644 1073 68 7 0 chr17 7792753 7792900 -87479751 + (GGGAGA)n Simple_repeat Simple_repeat 4 151 0 3 644 1741 147 81 67 chr17 7792900 7793083 -87479568 - ORR1C1 LTR MaLR -198 180 4 3 644 529 344 72 32 chr17 7793083 7793114 -87479537 + MLT1I LTR MaLR 342 378 -33 3 644 21 0 0 0 chr17 7793755 7793776 -87478875 + AT_rich Low_complexity Low_complexity 1 21 0 3 644 198 206 41 0 chr17 7795280 7795353 -87477298 + CT-rich Low_complexity Low_complexity 6 81 0 3 644 2447 104 0 0 chr17 7795968 7796294 -87476357 - ORR1A2 LTR MaLR 0 327 2 3 644 1408 240 75 12 chr17 7796519 7797031 -87475620 + RMER19A LTR ERVK 146 737 0 4 644 807 126 0 0 chr17 7797289 7797416 -87475235 + (CAGA)n Simple_repeat Simple_repeat 2 128 0 4 644 679 280 0 27 chr17 7797417 7797570 -87475081 + B3A SINE B2 11 162 -36 4 644 598 105 9 9 chr17 7797570 7797676 -87474975 + (CA)n Simple_repeat Simple_repeat 2 107 0 4 644 679 280 0 27 chr17 7797676 7797709 -87474942 + B3A SINE B2 163 192 -6 4 644 440 250 55 6 chr17 7798251 7798305 -87474346 + polypyrimidine Low_complexity Low_complexity 120 175 0 4 644 1041 89 0 0 chr17 7798305 7798451 -87474200 + (TTCTC)n Simple_repeat Simple_repeat 3 148 0 4 644 440 250 55 6 chr17 7798451 7798561 -87474090 + polypyrimidine Low_complexity Low_complexity 4 119 0 4 644 291 193 34 0 chr17 7798563 7798651 -87474000 + CT-rich Low_complexity Low_complexity 5 95 0 4 644 23 33 0 0 chr17 7798905 7798935 -87473716 + AT_rich Low_complexity Low_complexity 1 30 0 4 644 189 0 0 0 chr17 7798939 7798960 -87473691 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 644 225 0 0 0 chr17 7798960 7798984 -87473667 + (GA)n Simple_repeat Simple_repeat 1 25 0 4 644 384 215 13 0 chr17 7799039 7799118 -87473533 - B3A SINE B2 -116 82 3 4 644 234 330 94 31 chr17 7799176 7799367 -87473284 - LTR40b LTR ERVL -77 385 183 4 644 4697 85 42 5 chr17 7799452 7800114 -87472537 + L1_Mus4 LINE L1 5948 6634 -2 4 644 359 296 75 50 chr17 7800692 7800852 -87471799 - RSINE1 SINE B4 0 165 2 4 644 396 310 0 0 chr17 7801663 7801763 -87470888 - PB1D10 SINE Alu -17 100 1 4 644 209 33 0 32 chr17 7801794 7801825 -87470826 + (TTTTA)n Simple_repeat Simple_repeat 5 34 0 4 644 538 223 315 0 chr17 7801827 7801973 -87470678 - B3 SINE B2 -24 192 1 4 644 269 211 38 50 chr17 7802376 7802456 -87470195 - MTEa LTR MaLR -108 271 193 4 644 2187 99 12 18 chr17 7802573 7802903 -87469748 - L1_Mus3 LINE L1 -1 6637 6310 4 644 623 125 0 9 chr17 7802976 7803081 -87469570 + (TTCC)n Simple_repeat Simple_repeat 1 104 0 4 644 645 112 0 0 chr17 7803527 7803625 -87469026 + ORR1B1 LTR MaLR 1 98 -296 4 644 1600 162 74 15 chr17 7803625 7803964 -87468687 + RMER17C LTR ERVK 1 359 -51 4 644 493 104 0 0 chr17 7803961 7804038 -87468613 + ORR1B1 LTR MaLR 318 394 0 4 644 463 188 0 12 chr17 7804564 7804645 -87468006 + B3 SINE B2 41 120 -96 4 644 1989 100 46 12 chr17 7804830 7805154 -87467497 - ORR1B1 LTR MaLR -1 393 59 4 644 393 277 106 66 chr17 7805287 7805310 -87467341 + L1ME4a LINE L1 5690 5710 -414 4 644 1498 60 0 5 chr17 7805310 7805494 -87467157 - B2_Mm2 SINE B2 -11 184 2 4 644 393 277 106 66 chr17 7805494 7805818 -87466833 + L1ME4a LINE L1 5711 6051 -73 4 644 300 200 0 0 chr17 7806286 7806376 -87466275 + (TG)n Simple_repeat Simple_repeat 2 91 0 4 644 1189 47 0 26 chr17 7806393 7806528 -87466123 + B1_Mus1 SINE Alu 1 135 -13 4 644 272 25 0 48 chr17 7806528 7806570 -87466081 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 4 644 1189 47 0 26 chr17 7806570 7806586 -87466065 + B1_Mus1 SINE Alu 136 148 0 4 644 727 165 77 8 chr17 7806760 7806924 -87465727 - ORR1C2 LTR MaLR 0 394 222 4 644 438 88 0 0 chr17 7806924 7806992 -87465659 + (CAGAGA)n Simple_repeat Simple_repeat 4 71 0 4 644 546 95 10 40 chr17 7807043 7807140 -87465511 - ORR1C2 LTR MaLR -230 154 61 4 644 241 188 28 111 chr17 7807140 7807212 -87465439 - RLTR31B_Mm LTR ERVK 0 557 492 4 644 730 255 139 39 chr17 7807286 7807339 -87465312 - RLTR31A_Mm LTR ERVK -103 458 402 4 644 201 39 0 0 chr17 7807339 7807365 -87465286 + (C)n Simple_repeat Simple_repeat 1 26 0 4 644 1624 143 148 9 chr17 7807365 7807727 -87464924 - RLTR31A_Mm LTR ERVK -160 401 1 4 644 286 161 63 16 chr17 7807727 7807790 -87464861 - ORR1C2 LTR MaLR -318 66 1 4 644 297 128 0 0 chr17 7808972 7809019 -87463632 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 644 424 261 34 34 chr17 7809019 7809138 -87463513 - B3A SINE B2 -57 141 23 4 644 624 14 0 0 chr17 7809139 7809212 -87463439 + (TTAGGG)n Simple_repeat Simple_repeat 1 73 0 4 644 308 25 0 0 chr17 7809212 7809252 -87463399 + RMER17D2 LTR ERVK 98 137 -672 4 644 614 311 47 21 chr17 7810028 7810307 -87462344 + B4A SINE B4 3 288 -4 4 644 218 377 32 16 chr17 7810594 7810718 -87461933 - L2b LINE L2 -10 3365 3240 4 644 378 328 53 16 chr17 7811415 7811604 -87461047 - B4A SINE B4 -12 280 85 4 644 741 53 0 0 chr17 7811795 7811889 -87460762 + (TCCA)n Simple_repeat Simple_repeat 1 94 0 4 644 841 211 10 67 chr17 7811916 7812109 -87460542 + MTEb LTR MaLR 153 334 -45 4 644 238 35 530 0 chr17 7813357 7813440 -87459211 + B2_Mm2 SINE B2 69 195 0 4 644 262 302 16 16 chr17 7813449 7813565 -87459086 + GA-rich Low_complexity Low_complexity 1 116 0 4 644 350 233 0 27 chr17 7814532 7814607 -87458044 - B1_Mur2 SINE Alu -1 148 76 4 644 422 347 0 0 chr17 7814606 7814727 -87457924 - B1F SINE Alu -22 127 7 4 644 5266 45 5 11 chr17 7814740 7815385 -87457266 - L1Md_F2 LINE L1 0 6582 5942 4 644 210 194 14 27 chr17 7815514 7815588 -87457063 + GA-rich Low_complexity Low_complexity 3 75 0 4 644 253 325 2 0 chr17 7816002 7816089 -87456562 + L1MA4A LINE L1 5814 5930 -373 4 644 582 114 0 0 chr17 7816600 7816688 -87455963 + (TCCA)n Simple_repeat Simple_repeat 2 89 0 4 644 817 246 66 10 chr17 7816689 7816886 -87455765 - B3 SINE B2 -7 209 2 4 644 3180 61 8 2 chr17 7817073 7817467 -87455184 - MTA_Mm LTR MaLR 0 396 1 4 644 273 299 0 49 chr17 7817882 7817963 -87454688 + RSINE1 SINE B4 89 165 0 4 644 207 0 0 0 chr17 7818061 7818084 -87454567 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 644 239 244 0 0 chr17 7819449 7819494 -87453157 + polypyrimidine Low_complexity Low_complexity 1 45 0 4 644 288 0 0 0 chr17 7820125 7820157 -87452494 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 644 225 0 0 0 chr17 7820292 7820317 -87452334 + (A)n Simple_repeat Simple_repeat 1 25 0 4 644 297 264 65 19 chr17 7820941 7821049 -87451602 + MIRc SINE MIR 70 182 -86 4 644 622 228 21 0 chr17 7821445 7821590 -87451061 - B1F2 SINE Alu -1 148 1 4 644 369 62 0 0 chr17 7821851 7821899 -87450752 + (TC)n Simple_repeat Simple_repeat 1 48 0 4 644 542 327 35 18 chr17 7822032 7822259 -87450392 - MTD-int LTR MaLR -1346 234 4 4 644 1135 255 78 48 chr17 7822268 7822668 -87449983 - MTD LTR MaLR -7 412 1 4 644 1628 183 29 6 chr17 7822679 7822993 -87449658 + ORR1D1 LTR MaLR 40 360 -14 4 644 3051 183 23 142 chr17 7823001 7823815 -87448836 - RMER1B Other Other -3 1063 347 4 644 191 239 26 66 chr17 7824375 7824451 -87448200 + L3 LINE CR1 4061 4133 -356 4 644 1893 117 11 126 chr17 7824605 7824977 -87447674 - ORR1A4 LTR MaLR 0 329 1 4 644 1004 250 0 9 chr17 7825347 7825561 -87447090 - B3 SINE B2 -4 212 1 4 644 593 228 69 27 chr17 7825573 7825758 -87446893 - B3A SINE B2 -9 186 20 4 644 246 312 39 23 chr17 7826500 7826628 -87446023 + MIRb SINE MIR 111 240 -28 4 644 255 170 0 0 chr17 7827503 7827550 -87445101 + CT-rich Low_complexity Low_complexity 2 48 0 4 644 1040 257 121 9 chr17 7827944 7828318 -87444333 - MTD LTR MaLR -15 404 1 4 644 581 301 142 42 chr17 7828318 7828605 -87444046 - MTEa LTR MaLR -56 323 8 4 644 1990 294 80 13 chr17 7828608 7829297 -87443354 - MTEa-int LTR MaLR -2 1578 844 4 644 396 0 0 0 chr17 7829448 7829492 -87443159 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 644 24 0 0 0 chr17 7829640 7829664 -87442987 + AT_rich Low_complexity Low_complexity 1 24 0 4 644 4748 70 12 0 chr17 7829664 7830268 -87442383 - L1_Mus1 LINE L1 -12 6555 5945 4 644 553 71 94 0 chr17 7830309 7830394 -87442257 - B2_Mm2 SINE B2 -102 93 1 4 644 3856 28 5 0 chr17 7830563 7830997 -87441654 - RLTR10C LTR ERVK 0 436 1 4 644 266 313 0 10 chr17 7831782 7831882 -87440769 + MLT1D LTR MaLR 407 505 0 4 644 499 308 20 27 chr17 7832302 7832452 -87440199 + B3 SINE B2 15 163 -53 4 644 2612 281 50 68 chr17 7832453 7833393 -87439258 + Lx9 LINE L1 6505 7431 -213 4 644 2797 53 12 6 chr17 7833393 7833737 -87438914 + ORR1A1 LTR MaLR 1 346 0 4 644 2612 281 50 68 chr17 7833737 7833876 -87438775 + Lx9 LINE L1 7432 7563 -81 4 644 249 33 0 0 chr17 7834516 7834546 -87438105 + (CCCCCA)n Simple_repeat Simple_repeat 1 30 0 4 644 239 295 139 55 chr17 7835108 7835309 -87437342 + MIRb SINE MIR 50 267 -1 4 644 306 0 0 0 chr17 7835755 7835789 -87436862 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 644 3064 161 2 33 chr17 7835989 7836534 -87436117 - RLTR11A LTR ERVK 0 528 1 4 644 273 280 311 49 chr17 7837102 7837308 -87435343 + MLT2C2 LTR ERVL 16 275 -189 4 644 568 324 44 10 chr17 7839090 7839296 -87433355 - MLT1F2 LTR MaLR 0 560 348 4 644 633 308 65 35 chr17 7839337 7839561 -87433090 - MLT1F2 LTR MaLR -293 255 14 4 644 3175 37 45 0 chr17 7839895 7840274 -87432377 + MTA_Mm LTR MaLR 1 396 0 4 644 3215 126 203 19 chr17 7840558 7841196 -87431455 - RMER6A LTR ERVK 0 756 1 4 644 342 0 0 0 chr17 7842187 7842225 -87430426 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 644 759 225 7 0 chr17 7842232 7842383 -87430268 - B3A SINE B2 -46 152 1 4 644 415 261 118 7 chr17 7842721 7842856 -87429795 + MTEb LTR MaLR 230 379 0 4 644 245 317 76 14 chr17 7844002 7844148 -87428503 - ORR1E LTR MaLR -228 146 1 4 644 397 289 114 13 chr17 7844227 7844559 -87428092 - L1M3c LINE L1 -4682 2355 1980 4 644 398 286 115 58 chr17 7844724 7844984 -87427667 - L1M3c LINE L1 -5331 1706 1432 4 644 303 28 0 0 chr17 7845641 7845677 -87426974 + (GA)n Simple_repeat Simple_repeat 1 36 0 4 644 180 111 0 0 chr17 7845680 7845707 -87426944 + (CGTG)n Simple_repeat Simple_repeat 4 30 0 4 644 629 271 82 89 chr17 7845708 7846000 -87426651 - B4A SINE B4 0 292 3 4 644 233 299 123 13 chr17 7847410 7847495 -87425156 - MLT1I LTR MaLR 0 448 318 4 644 334 278 78 2 chr17 7847692 7847818 -87424833 + B1F1 SINE Alu 1 129 -18 5 644 328 263 121 11 chr17 7847869 7847995 -87424656 + MIRb SINE MIR 50 192 -76 5 644 1115 234 60 82 chr17 7848929 7849395 -87423256 - MT2A LTR ERVL -13 588 3 5 644 963 280 29 47 chr17 7849614 7849891 -87422760 + B4A SINE B4 7 278 -14 5 644 279 114 0 0 chr17 7849906 7849950 -87422701 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 644 3469 30 2 2 chr17 7850438 7850834 -87421817 + MTA_Mm LTR MaLR 1 396 0 5 644 376 331 17 52 chr17 7851156 7851328 -87421323 - L1MEf LINE L1 -3691 2648 2483 5 644 526 239 224 0 chr17 7851342 7851513 -87421138 - ID_B1 SINE B4 -8 216 8 5 644 294 202 100 46 chr17 7851693 7851823 -87420828 - L1MEf LINE L1 -4024 2376 2240 5 644 860 365 86 40 chr17 7851932 7852580 -87420071 - L1MEf LINE L1 -4827 1588 911 5 644 267 273 36 0 chr17 7852763 7852818 -87419833 - B4 SINE B4 0 292 236 5 644 311 229 0 0 chr17 7852849 7852910 -87419741 + B4A SINE B4 112 172 -120 5 644 1107 190 133 16 chr17 7853389 7853654 -87418997 + IAPEY3_LTR LTR ERVK 1 273 -59 5 644 1021 266 27 15 chr17 7854528 7854719 -87417932 - ORR1D2 LTR MaLR 0 370 175 5 644 396 0 0 0 chr17 7854719 7854763 -87417888 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 644 1021 266 27 15 chr17 7854763 7854831 -87417820 - ORR1D2 LTR MaLR -196 174 108 5 644 422 96 24 0 chr17 7854831 7854870 -87417781 + (TTTTTG)n Simple_repeat Simple_repeat 6 44 0 5 644 1101 103 7 0 chr17 7854870 7855016 -87417635 - B1_Mm SINE Alu 0 147 1 5 644 422 96 24 0 chr17 7855016 7855059 -87417592 + (TTTTTG)n Simple_repeat Simple_repeat 3 47 0 5 644 553 168 74 14 chr17 7855059 7855189 -87417462 - ORR1D2 LTR MaLR -255 129 1 5 644 1140 97 0 0 chr17 7855260 7855405 -87417246 + B1_Mus2 SINE Alu 3 147 0 5 644 1240 232 88 3 chr17 7857607 7857948 -87414703 + ORR1D2 LTR MaLR 1 370 0 5 644 1066 68 0 8 chr17 7858113 7858247 -87414404 - B1_Mus1 SINE Alu -15 133 1 5 644 1433 271 121 25 chr17 7858314 7858825 -87413826 + L1M4b LINE L1 557 1116 -6218 5 644 1621 162 4 15 chr17 7859131 7859401 -87413250 + MERVL_2A-int LTR ERVL 1707 1973 -3788 5 644 248 263 92 126 chr17 7859420 7859594 -87413057 + B4A SINE B4 125 292 0 5 644 395 264 22 84 chr17 7860514 7860692 -87411959 + MIR SINE MIR 52 218 -44 5 644 1416 70 0 16 chr17 7861309 7861497 -87411154 - B2_Mm2 SINE B2 -8 187 3 5 644 259 258 20 40 chr17 7861899 7862000 -87410651 + GA-rich Low_complexity Low_complexity 3 101 0 5 644 250 278 0 50 chr17 7862066 7862120 -87410531 + ORR1B1-int LTR MaLR 601 647 -862 5 644 737 62 5 11 chr17 7862120 7862242 -87410409 + B1_Mus1 SINE Alu 2 120 0 5 644 321 189 0 0 chr17 7862307 7862397 -87410254 + CT-rich Low_complexity Low_complexity 1 90 0 5 644 4448 233 67 28 chr17 7862893 7863871 -87408780 - Lx6 LINE L1 -278 7182 6176 5 644 1152 109 0 0 chr17 7863871 7864051 -87408600 + (TG)n Simple_repeat Simple_repeat 1 182 -89 5 644 1152 109 0 0 chr17 7864056 7864142 -87408509 + (TG)n Simple_repeat Simple_repeat 183 271 0 5 644 4448 233 67 28 chr17 7864142 7864245 -87408406 - Lx6 LINE L1 -1301 6159 6053 5 644 334 210 16 0 chr17 7864224 7864286 -87408365 - Lx8 LINE L1 -478 6995 6933 5 80 245 269 164 0 chr17 7864286 7864390 -87408261 - MER65D LTR ERV1 -149 324 204 5 645 381 277 0 28 chr17 7864551 7864696 -87407955 + CT-rich Low_complexity Low_complexity 2 142 0 5 645 654 49 0 0 chr17 7864940 7865022 -87407629 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 5 645 276 200 215 0 chr17 7865457 7865522 -87407129 + MER45A DNA Tip100 98 176 -2 5 645 2064 129 62 18 chr17 7865579 7865917 -87406734 + ORR1B1 LTR MaLR 42 394 0 5 645 1204 180 13 9 chr17 7866610 7866834 -87405817 + URR1B DNA MER1_type 1 225 0 5 645 1016 114 6 0 chr17 7866915 7867091 -87405560 + (TG)n Simple_repeat Simple_repeat 1 177 0 5 645 696 198 0 0 chr17 7867110 7867438 -87405213 + (TG)n Simple_repeat Simple_repeat 1 328 0 5 645 668 216 8 0 chr17 7867794 7867919 -87404732 - B1_Mur4 SINE Alu -5 145 20 5 645 1145 73 0 7 chr17 7869443 7869594 -87403057 + B2_Mm2 SINE B2 1 150 -45 5 645 356 0 0 22 chr17 7869598 7869643 -87403008 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 5 645 519 332 195 20 chr17 7869684 7870074 -87402577 - MLT1G3 LTR MaLR -36 559 102 5 645 938 220 70 0 chr17 7872387 7872587 -87400064 - B3 SINE B2 0 216 3 5 645 659 308 26 78 chr17 7872649 7872883 -87399768 + ORR1E LTR MaLR 2 223 -147 5 645 3327 33 10 2 chr17 7874263 7874656 -87397995 - MTA_Mm LTR MaLR 0 396 1 5 645 495 0 0 0 chr17 7875053 7875108 -87397543 + (TC)n Simple_repeat Simple_repeat 2 56 0 5 645 24 0 0 0 chr17 7875688 7875712 -87396939 + AT_rich Low_complexity Low_complexity 1 24 0 5 645 495 0 0 0 chr17 7876685 7876740 -87395911 + (TC)n Simple_repeat Simple_repeat 2 56 0 5 645 2899 254 103 35 chr17 7876890 7877723 -87394928 + Lx8 LINE L1 6469 7358 -115 5 645 2505 34 3 0 chr17 7877723 7878018 -87394633 + L1Md_A LINE L1 6287 6582 0 5 645 2899 254 103 35 chr17 7878018 7878120 -87394531 + Lx8 LINE L1 7359 7466 -7 5 645 292 274 17 42 chr17 7878184 7878302 -87394349 + L1M1 LINE L1 5708 5822 -481 5 645 1118 65 0 0 chr17 7878309 7878447 -87394204 + B1_Mus1 SINE Alu 2 139 -9 5 645 4093 71 8 0 chr17 7878447 7878969 -87393682 + L1_Mus1 LINE L1 6042 6567 0 5 645 636 306 85 7 chr17 7879047 7879317 -87393334 + L1MA6 LINE L1 5814 6104 -196 5 645 285 118 0 0 chr17 7880197 7880248 -87392403 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 645 259 340 97 0 chr17 7880610 7880713 -87391938 - MER33 DNA MER1_type -190 134 22 5 645 1153 148 113 5 chr17 7880995 7881198 -87391453 - URR1A DNA MER1_type -1 225 1 5 645 210 37 0 0 chr17 7882683 7882710 -87389941 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 5 645 282 358 30 7 chr17 7882948 7883083 -87389568 - LTR33 LTR ERVL -10 505 368 5 645 9076 136 27 60 chr17 7883461 7883763 -87388888 - RLTR21 LTR ERVK -3 1569 1251 5 645 453 36 0 0 chr17 7883763 7883818 -87388833 + (CATA)n Simple_repeat Simple_repeat 4 58 0 5 645 9076 136 27 60 chr17 7883818 7883941 -87388710 - RLTR21 LTR ERVK -322 1250 1178 5 645 387 0 0 0 chr17 7883941 7883984 -87388667 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 645 9076 136 27 60 chr17 7883984 7884445 -87388206 - RLTR21 LTR ERVK -395 1177 712 5 645 1173 82 0 0 chr17 7884445 7884592 -87388059 + B1_Mus1 SINE Alu 2 148 0 5 645 9076 136 27 60 chr17 7884592 7885326 -87387325 - RLTR21 LTR ERVK -861 711 1 5 645 1170 69 17 0 chr17 7885481 7885655 -87386996 + (GGA)n Simple_repeat Simple_repeat 1 177 0 5 645 1120 220 283 27 chr17 7885714 7886007 -87386644 - ORR1D2 LTR MaLR 0 370 3 5 645 1403 221 94 52 chr17 7887221 7887623 -87385028 + MTD LTR MaLR 1 419 0 5 645 447 224 0 0 chr17 7888034 7888177 -87384474 + CT-rich Low_complexity Low_complexity 3 145 0 5 645 237 233 40 14 chr17 7888325 7888399 -87384252 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 5 645 460 218 54 66 chr17 7888481 7888648 -87384003 - L1MA4A LINE L1 -379 5924 5760 5 645 1349 220 133 64 chr17 7888659 7889200 -87383451 - ORR1D2-int LTR MaLR -98 1160 471 5 645 483 256 137 11 chr17 7889344 7889526 -87383125 - L1MCc LINE L1 -5102 1321 1117 5 645 895 199 75 28 chr17 7890796 7891008 -87381643 + RLTR18B LTR ERVK 15 236 -276 5 645 1980 254 35 42 chr17 7891021 7891572 -87381079 - ORR1D2-int LTR MaLR -822 548 2 5 645 442 130 0 0 chr17 7891573 7891642 -87381009 - ORR1D2 LTR MaLR 0 370 302 5 645 3254 52 0 5 chr17 7891643 7892048 -87380603 - L1Md_F2 LINE L1 0 6582 6180 5 645 1064 36 0 21 chr17 7892085 7892097 -87380554 - B1_Mm SINE Alu 0 147 138 5 645 387 0 0 0 chr17 7892097 7892140 -87380511 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 5 645 1064 36 0 21 chr17 7892140 7892269 -87380382 - B1_Mm SINE Alu -10 137 9 5 645 780 322 60 20 chr17 7892271 7892572 -87380079 - ORR1D2 LTR MaLR -56 314 2 5 645 607 57 11 11 chr17 7892673 7892762 -87379889 + (TTTTC)n Simple_repeat Simple_repeat 2 90 0 5 645 207 100 0 0 chr17 7894709 7894739 -87377912 + (CAGA)n Simple_repeat Simple_repeat 2 31 0 5 645 4567 166 40 71 chr17 7895508 7896438 -87376213 + RMER19B LTR ERVK 2 902 0 5 645 544 289 49 28 chr17 7896739 7897024 -87375627 + RLTR15 LTR ERVK 1 291 -68 5 645 1681 244 36 3 chr17 7897088 7897474 -87375177 + MTD LTR MaLR 1 399 -20 5 645 1738 232 58 16 chr17 7897491 7897636 -87375015 + MTD-int LTR MaLR 5 169 -1089 5 645 3225 31 34 0 chr17 7897636 7898019 -87374632 + MTA_Mm LTR MaLR 1 396 0 5 645 1738 232 58 16 chr17 7898019 7898359 -87374292 + MTD-int LTR MaLR 170 509 -749 5 645 1266 232 167 76 chr17 7898368 7898855 -87373796 + MT2B LTR ERVL 1 546 -55 5 645 189 74 0 0 chr17 7898855 7898882 -87373769 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 645 1266 232 167 76 chr17 7898882 7898945 -87373706 + MT2B LTR ERVL 547 601 0 5 645 1330 112 5 0 chr17 7899506 7899694 -87372957 + B2_Mm1a SINE B2 2 190 -3 5 645 482 300 36 0 chr17 7900693 7900833 -87371818 + RSINE1 SINE B4 6 150 -15 5 645 1422 234 34 11 chr17 7900893 7901243 -87371408 - ORR1D2 LTR MaLR 0 370 13 5 645 392 332 89 45 chr17 7901487 7901733 -87370918 - MTEa LTR MaLR -116 263 7 5 645 802 37 9 0 chr17 7901968 7902075 -87370576 - B1_Mus2 SINE Alu 0 147 40 5 645 1129 229 19 120 chr17 7902517 7902726 -87369925 - MTEb LTR MaLR -2 377 197 5 645 1013 113 17 6 chr17 7902726 7902904 -87369747 + (GGA)n Simple_repeat Simple_repeat 1 180 0 5 645 1129 229 19 120 chr17 7902904 7903110 -87369541 - MTEb LTR MaLR -183 196 4 5 645 405 0 0 0 chr17 7903276 7903321 -87369330 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 645 3221 122 33 0 chr17 7903325 7903815 -87368836 - Lx2 LINE L1 -10 6987 6482 5 645 212 189 0 0 chr17 7904632 7904669 -87367982 - MIRc SINE MIR -217 51 15 5 645 21 57 0 0 chr17 7904728 7904763 -87367888 + AT_rich Low_complexity Low_complexity 1 35 0 5 645 817 171 6 6 chr17 7905609 7905780 -87366871 + CT-rich Low_complexity Low_complexity 1 171 0 5 645 590 185 24 12 chr17 7905756 7905920 -87366731 + C-rich Low_complexity Low_complexity 6 171 0 5 645 396 330 98 0 chr17 7907471 7907665 -87364986 - MER20 DNA MER1_type -5 214 2 5 645 586 257 61 8 chr17 7909077 7909244 -87363407 + MTD LTR MaLR 1 189 -230 5 645 249 108 0 0 chr17 7909244 7909281 -87363370 + (CATA)n Simple_repeat Simple_repeat 2 38 0 5 645 228 163 0 0 chr17 7909302 7909345 -87363306 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 645 451 256 82 43 chr17 7909346 7909530 -87363121 + MTD LTR MaLR 186 376 -43 5 645 366 209 14 28 chr17 7909605 7909748 -87362903 + GA-rich Low_complexity Low_complexity 1 141 0 6 645 1077 83 21 0 chr17 7910199 7910343 -87362308 - B1_Mus1 SINE Alu 0 148 2 6 645 330 45 0 0 chr17 7911166 7911210 -87361441 + (T)n Simple_repeat Simple_repeat 1 44 0 6 645 501 92 0 0 chr17 7912805 7912881 -87359770 + (TG)n Simple_repeat Simple_repeat 1 76 0 6 645 343 212 0 0 chr17 7912883 7912949 -87359702 - B3A SINE B2 -47 151 86 6 645 327 243 0 0 chr17 7912997 7913071 -87359580 - B3A SINE B2 -124 74 1 6 645 1213 224 134 17 chr17 7913877 7914235 -87358416 - MTD LTR MaLR -16 403 4 6 645 655 142 7 45 chr17 7914801 7914956 -87357695 + RLTR31_Mm LTR ERVK 1 149 -412 6 645 252 0 0 0 chr17 7914978 7915006 -87357645 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 6 645 248 0 31 0 chr17 7915007 7915039 -87357612 + (TAA)n Simple_repeat Simple_repeat 1 33 0 6 645 368 186 0 28 chr17 7915043 7915115 -87357536 - RMER3D-int LTR ERVK -2772 70 1 6 645 351 188 3 32 chr17 7915115 7915213 -87357438 - RLTR31_Mm LTR ERVK 0 692 626 6 645 506 206 17 104 chr17 7915225 7915398 -87357253 - RLTR31_Mm LTR ERVK -51 510 353 6 645 1626 185 65 6 chr17 7915583 7915936 -87356715 + ORR1D1 LTR MaLR 1 374 0 6 645 566 276 0 15 chr17 7918317 7918453 -87354198 - B1F1 SINE Alu -11 138 5 6 645 878 149 28 77 chr17 7918902 7919084 -87353567 - URR1B DNA MER1_type -47 178 6 6 645 490 264 113 6 chr17 7919177 7919345 -87353306 + MTE2a LTR MaLR 194 379 0 6 645 378 250 105 59 chr17 7919346 7919499 -87353152 + MTE2a-int LTR MaLR 2 161 -1209 6 645 258 333 75 34 chr17 7919585 7919731 -87352920 - L1MEf LINE L1 -5652 548 397 6 645 33 0 0 0 chr17 7919853 7919886 -87352765 + AT_rich Low_complexity Low_complexity 1 33 0 6 645 737 228 17 55 chr17 7919966 7920147 -87352504 + B3 SINE B2 1 174 -42 6 645 264 77 0 0 chr17 7920151 7920190 -87352461 + (TC)n Simple_repeat Simple_repeat 2 40 0 6 645 414 0 0 0 chr17 7920192 7920238 -87352413 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 645 4317 14 0 0 chr17 7920307 7920795 -87351856 - L1Md_T LINE L1 -1746 4137 3650 6 645 12721 21 0 0 chr17 7920794 7922242 -87350409 + L1Md_T LINE L1 4138 5585 -298 6 645 8753 27 0 0 chr17 7922243 7923239 -87349412 + L1Md_T LINE L1 5587 6582 0 6 645 244 278 13 13 chr17 7923590 7923682 -87348969 + L1ME2z LINE L1 6059 6150 -29 6 645 2793 53 0 12 chr17 7923685 7924027 -87348624 + ORR1A1 LTR MaLR 5 342 -4 6 645 23 33 0 0 chr17 7925707 7925737 -87346914 + AT_rich Low_complexity Low_complexity 1 30 0 6 645 486 0 0 0 chr17 7926098 7926152 -87346499 + (CTAGT)n Simple_repeat Simple_repeat 3 56 0 6 645 222 118 0 0 chr17 7927039 7927073 -87345578 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 645 411 21 0 0 chr17 7927073 7927120 -87345531 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 645 502 286 22 15 chr17 7927125 7927260 -87345391 - B3A SINE B2 -46 170 35 6 645 297 0 0 0 chr17 7927261 7927294 -87345357 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 645 477 0 0 0 chr17 7927294 7927346 -87345305 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 645 673 209 7 28 chr17 7927346 7927489 -87345162 - B1_Mur4 SINE Alu -8 142 3 6 645 762 179 201 0 chr17 7927547 7927726 -87344925 + B3 SINE B2 2 216 0 6 645 451 321 48 130 chr17 7928195 7928510 -87344141 - B4 SINE B4 -3 289 1 6 645 476 246 164 62 chr17 7928513 7928638 -87344013 - B4 SINE B4 -75 217 90 6 645 528 16 0 0 chr17 7928638 7928699 -87343952 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 645 476 246 164 62 chr17 7928699 7928768 -87343883 - B4 SINE B4 -203 89 3 6 645 273 347 13 34 chr17 7928827 7928976 -87343675 - MER58C DNA MER1_type -10 205 60 6 645 207 0 0 0 chr17 7929213 7929236 -87343415 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 645 417 314 185 14 chr17 7929485 7929853 -87342798 + MLT2B3 LTR ERVL 80 510 -44 6 645 541 174 12 0 chr17 7929856 7930017 -87342634 + (TCTA)n Simple_repeat Simple_repeat 3 165 0 6 645 1013 177 0 22 chr17 7930050 7930229 -87342422 - B3A SINE B2 -16 182 8 6 645 248 0 31 0 chr17 7930229 7930261 -87342390 + (TCTG)n Simple_repeat Simple_repeat 3 35 0 6 645 677 266 124 26 chr17 7930779 7931045 -87341606 + B4 SINE B4 1 292 0 6 645 360 147 0 0 chr17 7931104 7931179 -87341472 + (TC)n Simple_repeat Simple_repeat 2 76 0 6 645 189 214 0 0 chr17 7931488 7931530 -87341121 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 645 390 247 129 7 chr17 7932868 7933015 -87339636 + MLT2D LTR ERVL 31 195 -219 6 645 471 18 0 0 chr17 7934191 7934247 -87338404 + (GGGA)n Simple_repeat Simple_repeat 3 58 0 6 645 21 0 0 0 chr17 7934378 7934399 -87338252 + AT_rich Low_complexity Low_complexity 1 21 0 6 645 258 274 83 10 chr17 7934805 7934901 -87337750 + ORR1E LTR MaLR 1 103 -256 6 645 511 265 191 0 chr17 7936080 7936216 -87336435 + RSINE1 SINE B4 4 165 0 6 645 294 358 0 0 chr17 7936216 7936378 -87336273 + (CA)n Simple_repeat Simple_repeat 1 162 0 6 645 380 300 0 82 chr17 7936394 7936590 -87336061 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 645 274 347 0 64 chr17 7936613 7936801 -87335850 + (CA)n Simple_repeat Simple_repeat 2 177 0 6 645 437 255 109 57 chr17 7936985 7937214 -87335437 + L1ME1 LINE L1 5630 5870 -309 6 645 934 180 0 0 chr17 7937219 7937369 -87335282 + B1_Mur4 SINE Alu 1 150 0 6 645 227 250 97 0 chr17 7937864 7937936 -87334715 - ID4_ SINE ID -2 81 3 6 645 197 65 32 0 chr17 7938171 7938202 -87334449 + (CAA)n Simple_repeat Simple_repeat 2 33 0 6 645 1003 174 15 0 chr17 7938202 7938398 -87334253 + URR1B DNA MER1_type 27 225 0 6 645 304 211 321 0 chr17 7938564 7938673 -87333978 + B1F SINE Alu 6 149 0 6 645 2281 199 28 32 chr17 7938796 7939227 -87333424 + Lx5 LINE L1 6622 7050 0 6 645 515 43 14 0 chr17 7939649 7939719 -87332932 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 6 645 306 226 78 78 chr17 7942460 7942575 -87330076 + MER63B DNA AcHobo 322 436 0 6 645 1565 222 94 11 chr17 7943361 7943743 -87328908 - MTD LTR MaLR 0 419 6 6 645 807 61 68 8 chr17 7944117 7944605 -87328046 + (TAGA)n Simple_repeat Simple_repeat 1 517 0 6 645 409 335 108 49 chr17 7944902 7945106 -87327545 + B4A SINE B4 77 292 0 6 645 560 108 18 0 chr17 7945128 7945239 -87327412 + (CAGA)n Simple_repeat Simple_repeat 4 116 0 6 645 264 320 100 15 chr17 7946112 7946242 -87326409 - MIR3 SINE MIR -66 142 2 6 645 201 200 22 22 chr17 7946290 7946336 -87326315 + (TCCA)n Simple_repeat Simple_repeat 2 47 0 6 645 663 332 22 14 chr17 7946766 7947041 -87325610 + B4A SINE B4 1 277 -15 6 645 360 0 0 0 chr17 7947666 7947706 -87324945 + (A)n Simple_repeat Simple_repeat 1 40 0 6 645 217 116 0 44 chr17 7948492 7948537 -87324114 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 6 645 792 292 75 8 chr17 7948547 7948799 -87323852 + B4A SINE B4 2 270 -22 6 645 333 0 0 0 chr17 7948810 7948847 -87323804 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 645 243 0 0 0 chr17 7948847 7948873 -87323778 + (CG)n Simple_repeat Simple_repeat 1 27 0 6 645 251 140 20 0 chr17 7949350 7949400 -87323251 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 645 361 194 54 27 chr17 7949419 7949567 -87323084 + (CA)n Simple_repeat Simple_repeat 2 153 0 6 645 310 223 37 43 chr17 7949607 7949771 -87322880 + (CATATA)n Simple_repeat Simple_repeat 2 164 0 6 645 270 127 42 0 chr17 7949776 7949847 -87322804 + (CA)n Simple_repeat Simple_repeat 2 75 0 6 645 229 258 14 83 chr17 7950069 7950141 -87322510 + BC1_Mm scRNA scRNA 5 71 -81 6 645 775 234 25 75 chr17 7950077 7950276 -87322375 + B3A SINE B2 9 197 -1 6 645 796 192 87 48 chr17 7950341 7950549 -87322102 + B3 SINE B2 1 216 0 6 645 303 212 0 0 chr17 7954646 7954726 -87317925 + (TG)n Simple_repeat Simple_repeat 2 81 0 6 645 692 267 41 0 chr17 7956532 7956678 -87315973 + RSINE1 SINE B4 4 155 -10 6 645 189 0 0 0 chr17 7956695 7956716 -87315935 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 6 645 291 191 0 0 chr17 7957446 7957514 -87315137 + CT-rich Low_complexity Low_complexity 1 68 0 6 645 246 304 7 7 chr17 7957993 7958129 -87314522 + (TGG)n Simple_repeat Simple_repeat 1 136 0 6 645 233 270 91 50 chr17 7958455 7958576 -87314075 + L4 LINE RTE 1628 1753 -276 6 645 757 286 97 91 chr17 7958614 7958790 -87313861 - MER58B DNA MER1_type 0 341 168 6 645 467 33 16 0 chr17 7958790 7958851 -87313800 + (TG)n Simple_repeat Simple_repeat 1 62 0 6 645 757 286 97 91 chr17 7958851 7959013 -87313638 - MER58B DNA MER1_type -174 167 2 6 645 207 69 0 0 chr17 7960197 7960226 -87312425 + (TTTCC)n Simple_repeat Simple_repeat 2 30 0 6 645 22 35 0 0 chr17 7960289 7960318 -87312333 + AT_rich Low_complexity Low_complexity 1 29 0 6 645 862 142 94 28 chr17 7960720 7960901 -87311750 - Lx4B LINE L1 0 7058 6866 6 645 956 237 58 55 chr17 7961345 7961689 -87310962 + RLTR15 LTR ERVK 1 345 -14 6 645 186 402 33 57 chr17 7961727 7961938 -87310713 - L4 LINE RTE -124 1905 1700 6 645 490 177 28 28 chr17 7962206 7962386 -87310265 + GA-rich Low_complexity Low_complexity 1 180 0 6 645 220 190 0 23 chr17 7962387 7962430 -87310221 + G-rich Low_complexity Low_complexity 5 46 0 6 645 448 280 112 0 chr17 7963372 7963497 -87309154 + B1F SINE Alu 2 140 -9 6 645 225 83 0 0 chr17 7963500 7963536 -87309115 + (CAAT)n Simple_repeat Simple_repeat 3 38 0 6 645 182 211 39 0 chr17 7963615 7963667 -87308984 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 6 645 362 242 28 83 chr17 7963734 7963842 -87308809 - L1MCa LINE L1 -4528 1980 1879 6 645 593 271 173 27 chr17 7966928 7967228 -87305423 + MER2 DNA MER2_type 1 344 -1 6 645 303 28 0 0 chr17 7969409 7969445 -87303206 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 645 1202 79 22 27 chr17 7969978 7970161 -87302490 + B2_Mm2 SINE B2 9 190 -5 6 645 605 254 0 0 chr17 7972182 7972312 -87300339 - B1_Mur1 SINE Alu -15 134 5 6 645 1169 62 0 0 chr17 7972664 7972810 -87299841 - B1_Mus1 SINE Alu -1 147 2 6 645 943 249 13 101 chr17 7973685 7973922 -87298729 + B4 SINE B4 77 292 0 7 645 1031 219 19 5 chr17 7974921 7975132 -87297519 + B3 SINE B2 3 216 0 7 645 1214 233 117 42 chr17 7976259 7976644 -87296007 + MTD LTR MaLR 5 418 -1 7 645 839 261 41 66 chr17 7981119 7981136 -87291515 + ORR1E LTR MaLR 1 17 -342 7 645 1899 78 39 4 chr17 7981136 7981395 -87291256 + L1Md_F2 LINE L1 6303 6570 -12 7 645 839 261 41 66 chr17 7981395 7981697 -87290954 + ORR1E LTR MaLR 18 312 -47 7 645 230 269 55 55 chr17 7982823 7982933 -87289718 - RLTR22_Mus LTR ERVK -114 1694 1585 7 645 328 349 35 29 chr17 7984216 7984387 -87288264 + MER121 Unknown Unknown 162 333 -79 7 645 242 281 36 12 chr17 7984535 7984618 -87288033 + RLTR44C LTR ERVK 60 144 -358 7 645 257 193 11 117 chr17 7986498 7986592 -87286059 - Charlie16a DNA MER1_type -131 211 128 7 645 190 240 35 128 chr17 7989473 7989559 -87283092 - MIR3 SINE MIR -19 189 112 7 645 831 286 48 79 chr17 7989714 7990095 -87282556 + MLT1B LTR MaLR 9 383 -7 7 645 893 321 107 56 chr17 7991275 7991806 -87280845 + MER44D DNA MER2_type 3 567 -138 7 645 5193 105 49 7 chr17 7991806 7992563 -87280088 + Lx4A LINE L1 6261 7049 -9 7 645 893 321 107 56 chr17 7992563 7992582 -87280069 + MER44D DNA MER2_type 568 581 -124 7 645 24 32 0 0 chr17 7994054 7994085 -87278566 + AT_rich Low_complexity Low_complexity 1 31 0 7 645 781 214 0 7 chr17 7994193 7994339 -87278312 - RSINE1 SINE B4 -17 148 4 7 646 273 341 54 24 chr17 7995521 7995689 -87276962 + MER121 Unknown Unknown 26 198 -214 7 646 324 0 0 0 chr17 7995720 7995756 -87276895 + (TC)n Simple_repeat Simple_repeat 1 36 0 7 646 333 0 0 0 chr17 7995757 7995794 -87276857 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 646 1357 245 90 57 chr17 7996654 7997022 -87275629 - MTD LTR MaLR -14 405 26 7 646 562 271 89 39 chr17 7997044 7997324 -87275327 - Tigger2b DNA MER2_type -432 294 1 7 646 383 293 27 104 chr17 7998306 7998489 -87274162 + B3 SINE B2 23 191 -25 7 646 259 316 75 147 chr17 7999330 7999623 -87273028 - ORR1E LTR MaLR -11 348 77 7 646 1344 95 11 5 chr17 8000094 8000284 -87272367 + B2_Mm2 SINE B2 2 192 -3 1 646 427 269 23 15 chr17 8000751 8000883 -87271768 - B1F SINE Alu 0 149 17 2 646 310 287 45 18 chr17 8001090 8001200 -87271451 + L3b LINE CR1 172 284 -198 3 646 517 281 64 7 chr17 8002121 8002261 -87270390 - RSINE1 SINE B4 -16 149 2 4 646 1302 88 0 0 chr17 8003058 8003321 -87269330 + (TTTC)n Simple_repeat Simple_repeat 1 263 0 5 646 311 326 139 21 chr17 8003321 8003465 -87269186 - HAL1-3A_ME LINE L1 -657 2201 2041 6 646 585 202 7 133 chr17 8005352 8005495 -87267156 + URR1A DNA MER1_type 1 125 -101 7 646 566 111 93 0 chr17 8006677 8006785 -87265866 + URR1A DNA MER1_type 108 225 -1 7 646 1371 30 0 0 chr17 8007733 8007897 -87264754 + (TCTCCC)n Simple_repeat Simple_repeat 6 169 0 8 646 941 276 81 26 chr17 8007924 8008195 -87264456 - B4 SINE B4 0 292 7 9 646 418 182 52 0 chr17 8008600 8008677 -87263974 + B1_Mur1 SINE Alu 40 120 -29 1 646 822 179 14 0 chr17 8008854 8008994 -87263657 + B1_Mur2 SINE Alu 1 142 -7 1 646 432 0 0 0 chr17 8008998 8009046 -87263605 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 1 646 440 324 22 22 chr17 8010150 8010289 -87262362 + B3 SINE B2 2 140 -76 1 646 486 129 0 0 chr17 8010302 8010387 -87262264 + (CA)n Simple_repeat Simple_repeat 1 85 0 1 646 279 279 196 21 chr17 8010941 8011084 -87261567 + MLT1L LTR MaLR 308 475 -135 1 646 716 283 53 0 chr17 8011974 8012161 -87260490 + ID_B1 SINE B4 2 198 -26 1 646 225 250 38 124 chr17 8012440 8012545 -87260106 - L2c LINE L2 0 3387 3292 1 646 2091 123 32 6 chr17 8012566 8012908 -87259743 + RLTR11B LTR ERVK 1 351 -102 1 646 227 250 15 0 chr17 8013334 8013402 -87259249 + CT-rich Low_complexity Low_complexity 1 69 0 1 646 760 272 118 67 chr17 8013690 8014021 -87258630 - MTD LTR MaLR -68 351 4 2 646 474 270 94 35 chr17 8015401 8015604 -87257047 + MLT1D LTR MaLR 283 497 -8 2 646 216 333 45 9 chr17 8016287 8016399 -87256252 + (CATG)n Simple_repeat Simple_repeat 3 118 0 2 646 288 310 47 33 chr17 8016673 8016823 -87255828 - Charlie1a DNA MER1_type -683 772 621 2 646 1379 45 22 11 chr17 8016826 8017004 -87255647 + B2_Mm2 SINE B2 3 182 -13 2 646 230 80 0 107 chr17 8017098 8017154 -87255497 + B2_Mm2 SINE B2 137 186 -9 2 646 285 171 0 0 chr17 8017172 8017224 -87255427 + T-rich Low_complexity Low_complexity 25 76 0 2 646 1137 55 7 7 chr17 8017224 8017370 -87255281 - B1_Mm SINE Alu 0 147 2 2 646 285 171 0 0 chr17 8017370 8017393 -87255258 + T-rich Low_complexity Low_complexity 2 24 0 2 646 372 361 27 45 chr17 8017401 8017624 -87255027 - Charlie1a DNA MER1_type -824 631 413 2 646 273 360 26 0 chr17 8017680 8017794 -87254857 - Charlie1a DNA MER1_type -1294 161 45 2 646 218 191 21 0 chr17 8019546 8019593 -87253058 + C-rich Low_complexity Low_complexity 1 48 0 2 646 396 0 0 0 chr17 8021209 8021253 -87251398 + (TC)n Simple_repeat Simple_repeat 2 45 0 3 646 431 321 77 64 chr17 8021492 8021805 -87250846 + MLT1C LTR MaLR 151 467 0 3 646 454 254 35 0 chr17 8022377 8022491 -87250160 - B4A SINE B4 -173 119 2 3 646 321 135 0 0 chr17 8022507 8022559 -87250092 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 646 846 285 14 14 chr17 8022653 8022863 -87249788 - ID_B1 SINE B4 -4 220 11 3 646 198 0 0 0 chr17 8022901 8022923 -87249728 + (TG)n Simple_repeat Simple_repeat 1 22 0 3 646 489 288 24 8 chr17 8023094 8023220 -87249431 + ID_B1 SINE B4 52 179 -45 3 646 417 282 27 0 chr17 8023129 8023239 -87249412 + PB1D10 SINE Alu 5 117 0 3 646 243 0 0 0 chr17 8023239 8023266 -87249385 + (GGAA)n Simple_repeat Simple_repeat 1 27 0 3 646 541 40 26 0 chr17 8023304 8023380 -87249271 + (TAGA)n Simple_repeat Simple_repeat 2 79 0 3 646 904 269 46 0 chr17 8025354 8025573 -87247078 - B4A SINE B4 -60 232 4 4 646 300 309 82 0 chr17 8026403 8026500 -87246151 - ORR1E LTR MaLR -251 108 4 4 646 930 117 13 58 chr17 8028440 8028595 -87244056 - B1_Mur3 SINE Alu 0 149 2 4 646 1016 254 40 40 chr17 8028631 8028927 -87243724 - Lx8 LINE L1 -5 7468 7173 4 646 566 231 8 9 chr17 8029870 8029970 -87242681 + B1_Mus2 SINE Alu 7 113 -34 4 646 399 246 92 94 chr17 8029970 8030207 -87242444 - RLTR13D3 LTR ERVK 0 1114 729 4 646 241 132 0 0 chr17 8030388 8030426 -87242225 - B2_Mm2 SINE B2 -157 38 1 4 646 228 152 20 61 chr17 8030887 8030925 -87241726 + B1_Mm SINE Alu 101 139 -8 4 646 222 37 0 0 chr17 8030925 8030952 -87241699 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 646 243 0 0 0 chr17 8030992 8031019 -87241632 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 646 726 53 0 0 chr17 8031019 8031113 -87241538 + (GA)n Simple_repeat Simple_repeat 2 96 0 4 646 1732 151 54 13 chr17 8031413 8031729 -87240922 - ORR1A4 LTR MaLR 0 329 1 5 646 247 323 65 30 chr17 8031755 8031924 -87240727 + L1MEe LINE L1 1540 1714 -4452 5 646 234 279 37 46 chr17 8032259 8032368 -87240283 + L1MEe LINE L1 2673 2780 -3366 5 646 258 276 111 10 chr17 8032832 8032931 -87239720 + PB1D10 SINE Alu 3 111 -6 5 646 399 332 72 60 chr17 8033082 8033482 -87239169 + L1MEe LINE L1 3654 4058 -2088 5 646 509 260 45 26 chr17 8033541 8033695 -87238956 - Kanga1 DNA Tc2 -1179 566 410 5 646 802 204 73 19 chr17 8034513 8034718 -87237933 + B3 SINE B2 1 216 0 5 646 198 103 0 0 chr17 8034892 8034921 -87237730 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5 646 483 18 0 0 chr17 8035612 8035668 -87236983 + (GGA)n Simple_repeat Simple_repeat 2 57 0 5 646 751 167 65 75 chr17 8036298 8036394 -87236257 + MTC LTR MaLR 2 96 -325 5 646 1396 81 38 0 chr17 8036394 8036579 -87236072 + B2_Mm2 SINE B2 1 192 -3 5 646 751 167 65 75 chr17 8036579 8036683 -87235968 + MTC LTR MaLR 97 200 -221 5 646 484 174 11 21 chr17 8036655 8036749 -87235902 + MTC LTR MaLR 329 421 0 5 646 1174 190 45 5 chr17 8036700 8036922 -87235729 - MTC LTR MaLR 0 421 191 5 646 365 303 90 11 chr17 8037139 8037231 -87235420 - LTR78 LTR ERV1 -67 1237 1133 6 646 369 0 0 0 chr17 8037231 8037272 -87235379 + (TAA)n Simple_repeat Simple_repeat 2 42 0 6 646 365 303 90 11 chr17 8037272 8037356 -87235295 - LTR78 LTR ERV1 -172 1132 1047 6 646 2937 35 21 0 chr17 8037466 8037805 -87234846 - ORR1A0 LTR MaLR 0 346 1 6 646 277 344 46 23 chr17 8038149 8038280 -87234371 + MLT1J2 LTR MaLR 70 203 -245 6 646 2237 122 12 0 chr17 8038454 8038774 -87233877 - ORR1A3 LTR MaLR 0 326 3 6 646 1284 279 43 22 chr17 8038794 8039164 -87233487 + MTEa LTR MaLR 2 379 0 6 646 564 355 61 69 chr17 8039407 8039900 -87232751 - MER82 DNA MER2_type -8 645 157 6 646 1612 145 58 102 chr17 8039912 8040274 -87232377 + ORR1B1 LTR MaLR 41 386 -8 6 646 352 222 50 20 chr17 8040375 8040476 -87232175 + B4A SINE B4 166 269 -23 6 646 378 0 0 0 chr17 8040476 8040518 -87232133 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 646 534 315 7 0 chr17 8040552 8040701 -87231950 - MER82 DNA MER2_type -496 157 8 6 646 232 346 25 0 chr17 8041602 8041683 -87230968 - MIRb SINE MIR -64 204 122 7 646 230 276 48 16 chr17 8042123 8042248 -87230403 + (TAGA)n Simple_repeat Simple_repeat 2 130 0 7 646 417 127 0 0 chr17 8042269 8042348 -87230303 + (TAGA)n Simple_repeat Simple_repeat 2 80 0 7 646 2143 88 74 0 chr17 8042420 8042717 -87229934 + ORR1A2 LTR MaLR 1 319 -8 7 646 185 165 61 10 chr17 8042723 8042821 -87229830 + (TAGA)n Simple_repeat Simple_repeat 3 105 0 7 646 258 116 0 0 chr17 8044313 8044356 -87228295 + (TC)n Simple_repeat Simple_repeat 1 43 0 7 646 253 344 0 39 chr17 8044383 8044513 -87228138 + C-rich Low_complexity Low_complexity 4 128 0 7 646 699 260 106 55 chr17 8045354 8045610 -87227041 + B4A SINE B4 1 269 -23 7 646 432 111 0 0 chr17 8045611 8045683 -87226968 + (CA)n Simple_repeat Simple_repeat 1 72 0 7 646 539 288 33 33 chr17 8045799 8045982 -87226669 + MER5A DNA MER1_type 1 183 -6 7 646 324 328 68 107 chr17 8046006 8046344 -87226307 + L1MC1 LINE L1 5997 6321 -12 7 646 2348 72 72 0 chr17 8046413 8046718 -87225933 + ORR1A2 LTR MaLR 1 327 0 8 646 582 294 69 31 chr17 8046854 8047114 -87225537 - MTD LTR MaLR -123 296 27 8 646 3680 164 24 9 chr17 8047115 8047797 -87224854 + RLTR17 LTR ERVK 1 692 0 8 646 1451 183 42 134 chr17 8047907 8048137 -87224514 + ORR1D1 LTR MaLR 3 193 -181 8 646 1848 147 40 3 chr17 8048137 8048437 -87224214 + RLTR10E LTR ERVK 1 311 0 8 646 1451 183 42 134 chr17 8048437 8048616 -87224035 + ORR1D1 LTR MaLR 194 374 0 8 646 1969 153 13 83 chr17 8048803 8049201 -87223450 + ORR1C1 LTR MaLR 1 370 -8 8 646 483 63 0 0 chr17 8049230 8049293 -87223358 + (TC)n Simple_repeat Simple_repeat 2 64 0 8 646 21 71 0 0 chr17 8049364 8049406 -87223245 + AT_rich Low_complexity Low_complexity 1 42 0 8 646 382 307 16 0 chr17 8049665 8049792 -87222859 + B1F2 SINE Alu 3 131 -18 8 646 264 185 0 0 chr17 8049815 8049869 -87222782 + GA-rich Low_complexity Low_complexity 2 55 0 8 646 307 211 11 11 chr17 8050387 8050478 -87222173 + G-rich Low_complexity Low_complexity 4 94 0 9 646 241 347 8 24 chr17 8050478 8050602 -87222049 + GA-rich Low_complexity Low_complexity 1 122 0 9 646 351 0 0 0 chr17 8050749 8050788 -87221863 + (CA)n Simple_repeat Simple_repeat 1 39 0 9 646 488 88 0 0 chr17 8051235 8051303 -87221348 + B3 SINE B2 1 68 -148 9 646 566 215 66 102 chr17 8051767 8052011 -87220640 - RLTR15 LTR ERVK 0 359 125 9 646 356 143 16 132 chr17 8052068 8052149 -87220502 - RLTR15 LTR ERVK -228 131 58 9 646 351 0 0 0 chr17 8052149 8052188 -87220463 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 9 646 1167 44 0 0 chr17 8052188 8052324 -87220327 - B1_Mus2 SINE Alu -10 137 2 9 646 356 143 16 132 chr17 8052324 8052362 -87220289 - RLTR15 LTR ERVK -302 57 26 9 646 376 277 101 67 chr17 8052866 8053044 -87219607 + RLTR23 LTR ERV1 247 430 0 9 646 310 49 0 0 chr17 8053293 8053334 -87219317 + RMER4A LTR ERVK 39 79 -506 9 646 258 206 21 42 chr17 8053334 8053430 -87219221 + (TTAA)n Simple_repeat Simple_repeat 1 94 0 9 646 1829 101 61 133 chr17 8053452 8053828 -87218823 + RMER4A LTR ERVK 115 463 -3 9 646 1219 62 0 0 chr17 8054451 8054597 -87218054 - B1_Mus1 SINE Alu 0 148 3 1 646 504 240 113 54 chr17 8054642 8054845 -87217806 + B3 SINE B2 2 216 0 1 646 728 278 24 14 chr17 8054960 8055168 -87217483 + ID_B1 SINE B4 2 211 -13 1 646 2596 94 79 33 chr17 8055171 8055591 -87217060 + Lx LINE L1 6213 6651 -3 1 646 1058 71 14 0 chr17 8055609 8055750 -87216901 + B1_Mus1 SINE Alu 6 148 0 1 646 272 224 35 0 chr17 8055750 8055835 -87216816 + A-rich Low_complexity Low_complexity 2 89 0 1 646 627 232 22 0 chr17 8055841 8055979 -87216672 + B1F SINE Alu 1 141 -8 1 646 236 160 19 39 chr17 8055982 8056034 -87216617 + GA-rich Low_complexity Low_complexity 4 54 0 1 646 595 265 94 58 chr17 8056057 8056281 -87216370 + Tigger7 DNA MER2_type 2218 2449 -42 1 646 636 337 55 18 chr17 8057461 8057736 -87214915 - MLT1B LTR MaLR -6 384 100 1 646 207 0 0 0 chr17 8058540 8058563 -87214088 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 646 207 237 224 0 chr17 8058565 8058641 -87214010 - L2b LINE L2 -32 3343 3251 1 646 2299 169 115 16 chr17 8058906 8059324 -87213327 - RLTR31B_Mm LTR ERVK -1 556 100 1 646 555 43 0 0 chr17 8059324 8059394 -87213257 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 646 2299 169 115 16 chr17 8059394 8059481 -87213170 - RLTR31B_Mm LTR ERVK -458 99 2 1 646 1090 93 0 0 chr17 8059816 8059955 -87212696 + B1_Mus2 SINE Alu 1 139 -8 1 646 221 237 11 29 chr17 8060427 8060601 -87212050 + (TA)n Simple_repeat Simple_repeat 2 172 0 1 646 370 238 133 0 chr17 8062457 8062562 -87210089 + B3 SINE B2 7 125 -91 1 646 243 214 107 0 chr17 8062694 8062750 -87209901 - RMER30 DNA MER1_type -38 164 103 1 646 197 83 100 0 chr17 8062757 8062817 -87209834 + T-rich Low_complexity Low_complexity 1 66 0 1 646 316 335 37 6 chr17 8063005 8063167 -87209484 - RMER15 LTR ERVL -5 570 404 1 646 261 285 79 120 chr17 8065402 8065669 -87206982 - ORR1E LTR MaLR -17 342 87 1 646 239 284 15 15 chr17 8065730 8065798 -87206853 - ORR1E LTR MaLR -290 69 2 1 646 2104 162 68 90 chr17 8065902 8066356 -87206295 - RLTR41 LTR ERV1 -2 444 1 1 646 480 269 20 27 chr17 8066923 8067072 -87205579 + B1F SINE Alu 1 148 -1 1 646 266 204 20 0 chr17 8067078 8067127 -87205524 + ID4 SINE ID 2 51 -32 1 646 210 191 0 0 chr17 8067239 8067281 -87205370 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 646 297 0 0 0 chr17 8067281 8067314 -87205337 + (GA)n Simple_repeat Simple_repeat 2 34 0 1 646 372 209 0 0 chr17 8069563 8069654 -87202997 + (CA)n Simple_repeat Simple_repeat 2 92 0 1 646 389 86 41 41 chr17 8072166 8072263 -87200388 + (CAGAGA)n Simple_repeat Simple_repeat 2 98 0 1 646 2247 190 53 88 chr17 8073518 8074066 -87198585 - RLTR24 LTR ERV1 0 529 1 1 646 519 334 107 54 chr17 8074451 8075260 -87197391 - L2a LINE L2 -144 3282 2433 1 646 562 301 13 19 chr17 8076358 8076517 -87196134 + RSINE1 SINE B4 8 165 0 1 646 747 197 36 0 chr17 8076744 8076881 -87195770 + RSINE1 SINE B4 24 165 0 1 646 22 88 0 0 chr17 8077045 8077102 -87195549 + AT_rich Low_complexity Low_complexity 1 57 0 1 646 522 310 32 6 chr17 8077226 8077382 -87195269 + RSINE1 SINE B4 2 161 -4 1 646 35 24 0 0 chr17 8077384 8077426 -87195225 + AT_rich Low_complexity Low_complexity 1 42 0 1 646 822 169 179 5 chr17 8077879 8078069 -87194582 + URR1A DNA MER1_type 1 223 -3 1 646 942 184 0 0 chr17 8078365 8078512 -87194139 + B1_Mus2 SINE Alu 1 147 0 1 646 246 299 52 0 chr17 8078541 8078618 -87194033 - ID2 SINE ID -2 81 1 1 646 446 222 8 92 chr17 8079062 8079181 -87193470 + PB1D10 SINE Alu 1 109 -8 1 646 603 40 0 0 chr17 8079181 8079255 -87193396 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 1 646 480 279 0 0 chr17 8079273 8079445 -87193206 + (TA)n Simple_repeat Simple_repeat 2 173 0 1 646 223 175 0 0 chr17 8079466 8079506 -87193145 + (CATATA)n Simple_repeat Simple_repeat 5 44 0 1 646 495 123 208 50 chr17 8079509 8079629 -87193022 - B1_Mus2 SINE Alu -7 140 2 1 646 673 270 106 80 chr17 8080134 8080619 -87192032 - RMER13A LTR ERVK -77 550 2 1 646 1247 134 45 31 chr17 8082304 8082527 -87190124 - URR1A DNA MER1_type 0 226 1 1 646 21 0 0 0 chr17 8082653 8082674 -87189977 + AT_rich Low_complexity Low_complexity 1 21 0 1 646 686 244 267 21 chr17 8083006 8083287 -87189364 + RLTR28B LTR ERVL 2 351 -130 1 646 207 156 0 0 chr17 8083307 8083339 -87189312 + (CACCC)n Simple_repeat Simple_repeat 3 34 0 1 646 284 180 66 0 chr17 8083345 8083406 -87189245 + RLTR28B LTR ERVL 435 499 -25 1 646 559 268 204 74 chr17 8083441 8083915 -87188736 - L1MA4A LINE L1 -373 5930 5333 1 646 219 103 0 0 chr17 8083915 8083954 -87188697 + (TC)n Simple_repeat Simple_repeat 1 39 0 1 646 372 335 89 6 chr17 8083974 8084154 -87188497 - L1MA4A LINE L1 -788 5355 5161 1 646 285 213 24 107 chr17 8084542 8084626 -87188025 + MER58A DNA MER1_type 38 114 -110 1 646 391 271 82 25 chr17 8084978 8085002 -87187649 + CYRA11_Mm Unknown Y-chromosome 148 180 -437 1 646 787 136 90 6 chr17 8085002 8085158 -87187493 - URR1A DNA MER1_type 0 226 58 1 646 246 304 57 35 chr17 8085603 8085757 -87186894 + L2a LINE L2 3017 3176 -250 1 646 207 359 0 0 chr17 8086025 8086089 -87186562 + L2a LINE L2 3311 3374 -1 1 646 275 26 51 0 chr17 8086465 8086504 -87186147 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 1 646 201 162 0 26 chr17 8086821 8086859 -87185792 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 646 252 267 28 9 chr17 8086859 8086965 -87185686 - RMER12 LTR ERVK -466 856 749 1 646 234 0 0 0 chr17 8087038 8087064 -87185587 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 1 646 1147 199 24 5 chr17 8087553 8087765 -87184886 + B3 SINE B2 1 216 0 1 646 514 243 121 34 chr17 8087804 8087953 -87184698 + B3A SINE B2 42 203 -13 1 646 324 125 0 20 chr17 8087964 8088013 -87184638 + HAL1-3A_ME LINE L1 1980 2027 -831 1 646 360 216 0 0 chr17 8088026 8088123 -87184528 + (CA)n Simple_repeat Simple_repeat 2 98 0 1 646 544 293 124 44 chr17 8088524 8088962 -87183689 + RLTR12B LTR ERVK 1 336 -23 1 646 366 143 0 0 chr17 8089690 8089767 -87182884 + (GA)n Simple_repeat Simple_repeat 2 78 0 1 646 378 0 0 0 chr17 8091060 8091102 -87181549 + (TAAA)n Simple_repeat Simple_repeat 4 45 0 1 646 388 77 43 11 chr17 8094392 8094484 -87178167 + (CAAAA)n Simple_repeat Simple_repeat 1 95 0 1 646 403 200 278 112 chr17 8094495 8094664 -87177987 + B3A SINE B2 1 197 -1 1 646 4243 33 12 0 chr17 8095603 8096090 -87176561 - MT2_Mm LTR ERVL 0 493 1 1 646 1314 171 14 0 chr17 8096176 8096398 -87176253 + URR1B DNA MER1_type 1 225 0 1 646 774 172 33 46 chr17 8097032 8097184 -87175467 + B1_Mur4 SINE Alu 1 150 0 1 646 247 349 0 44 chr17 8097318 8097408 -87175243 + RSINE1 SINE B4 1 86 -79 1 646 1045 96 20 0 chr17 8097330 8097476 -87175175 + B2_Mm2 SINE B2 8 156 -39 1 646 294 194 0 0 chr17 8097477 8097539 -87175112 + G-rich Low_complexity Low_complexity 3 64 0 1 646 1242 100 0 0 chr17 8097539 8097719 -87174932 + (GAA)n Simple_repeat Simple_repeat 1 180 0 1 646 271 333 0 80 chr17 8097741 8097816 -87174835 + B4 SINE B4 217 285 -7 1 646 373 305 28 9 chr17 8098788 8098894 -87173757 + B1F SINE Alu 39 146 -3 1 646 200 86 29 0 chr17 8099024 8099059 -87173592 + (GGGA)n Simple_repeat Simple_repeat 1 36 0 1 646 840 84 0 0 chr17 8099532 8099663 -87172988 + (CCCCAG)n Simple_repeat Simple_repeat 3 133 0 1 646 689 128 7 0 chr17 8099664 8099812 -87172839 + (TCC)n Simple_repeat Simple_repeat 1 149 0 1 646 498 160 0 0 chr17 8099913 8100044 -87172607 + CT-rich Low_complexity Low_complexity 3 133 0 1 646 930 122 0 0 chr17 8100046 8100226 -87172425 + (TCC)n Simple_repeat Simple_repeat 1 180 0 1 646 835 122 0 16 chr17 8100241 8100424 -87172227 + (TCC)n Simple_repeat Simple_repeat 1 180 0 1 646 309 189 0 0 chr17 8100438 8100528 -87172123 + CT-rich Low_complexity Low_complexity 2 91 0 1 646 975 113 0 4 chr17 8100673 8100947 -87171704 + (TCC)n Simple_repeat Simple_repeat 1 272 0 1 646 527 131 0 16 chr17 8101006 8101130 -87171521 + (TCC)n Simple_repeat Simple_repeat 3 124 0 1 646 948 133 0 0 chr17 8101182 8101362 -87171289 + (TCC)n Simple_repeat Simple_repeat 1 180 0 1 646 836 131 0 5 chr17 8101376 8101786 -87170865 + (TCC)n Simple_repeat Simple_repeat 1 407 0 1 646 302 226 26 30 chr17 8101786 8102020 -87170631 + CT-rich Low_complexity Low_complexity 1 232 0 1 646 514 162 0 19 chr17 8102151 8102242 -87170409 + CT-rich Low_complexity Low_complexity 67 154 0 1 646 1107 84 0 0 chr17 8102242 8102420 -87170231 + (TCC)n Simple_repeat Simple_repeat 3 180 0 1 646 514 162 0 19 chr17 8102420 8102464 -87170187 + polypyrimidine Low_complexity Low_complexity 23 66 0 1 646 990 112 0 0 chr17 8102464 8102642 -87170009 + (TCC)n Simple_repeat Simple_repeat 3 180 0 1 646 514 162 0 19 chr17 8102642 8102662 -87169989 + polypyrimidine Low_complexity Low_complexity 3 22 0 1 646 205 212 0 21 chr17 8102700 8102840 -87169811 + CT-rich Low_complexity Low_complexity 3 139 0 1 646 671 129 0 43 chr17 8102843 8102894 -87169757 + polypyrimidine Low_complexity Low_complexity 131 179 0 1 646 981 113 0 0 chr17 8102894 8103071 -87169580 + (TCC)n Simple_repeat Simple_repeat 3 179 0 1 646 671 129 0 43 chr17 8103071 8103205 -87169446 + CT-rich Low_complexity Low_complexity 2 130 0 1 646 349 157 0 82 chr17 8103254 8103448 -87169203 + CT-rich Low_complexity Low_complexity 1 178 0 1 646 201 94 0 0 chr17 8103625 8103657 -87168994 + (TCCC)n Simple_repeat Simple_repeat 1 32 0 1 646 811 125 0 16 chr17 8103788 8104035 -87168616 + (TCC)n Simple_repeat Simple_repeat 1 242 0 1 646 707 175 0 3 chr17 8104037 8104275 -87168376 + CT-rich Low_complexity Low_complexity 1 237 0 1 646 927 117 0 0 chr17 8104275 8104455 -87168196 + (TCC)n Simple_repeat Simple_repeat 1 180 0 1 646 707 152 0 6 chr17 8104455 8104492 -87168159 + polypyrimidine Low_complexity Low_complexity 3 39 0 1 646 880 124 0 11 chr17 8104494 8104674 -87167977 + (TCC)n Simple_repeat Simple_repeat 3 180 0 1 646 262 188 0 20 chr17 8104678 8104776 -87167875 + CT-rich Low_complexity Low_complexity 2 97 0 1 646 546 133 0 0 chr17 8104883 8104996 -87167655 + (TCC)n Simple_repeat Simple_repeat 3 115 0 2 646 373 178 0 23 chr17 8105042 8105125 -87167526 + CT-rich Low_complexity Low_complexity 50 129 0 2 646 1050 100 0 0 chr17 8105125 8105305 -87167346 + (TCC)n Simple_repeat Simple_repeat 1 180 0 2 646 373 178 0 23 chr17 8105305 8105353 -87167298 + polypyrimidine Low_complexity Low_complexity 2 49 0 2 646 845 131 0 6 chr17 8105430 8105607 -87167044 + (TCC)n Simple_repeat Simple_repeat 3 178 0 2 646 652 157 0 11 chr17 8105721 8105743 -87166908 + polypyrimidine Low_complexity Low_complexity 157 178 0 2 646 1116 89 0 0 chr17 8105743 8105923 -87166728 + (TCC)n Simple_repeat Simple_repeat 1 180 0 2 646 652 157 0 11 chr17 8105923 8106025 -87166626 + polypyrimidine Low_complexity Low_complexity 55 156 0 2 646 1071 94 0 0 chr17 8106025 8106205 -87166446 + (TCC)n Simple_repeat Simple_repeat 1 180 0 2 646 652 157 0 11 chr17 8106205 8106238 -87166413 + polypyrimidine Low_complexity Low_complexity 22 54 0 2 646 969 118 0 0 chr17 8106238 8106416 -87166235 + (TCC)n Simple_repeat Simple_repeat 3 180 0 2 646 652 157 0 11 chr17 8106416 8106436 -87166215 + polypyrimidine Low_complexity Low_complexity 2 21 0 2 646 396 302 153 60 chr17 8108439 8108654 -87163997 + MLT1B LTR MaLR 150 384 -6 2 646 406 313 10 0 chr17 8109301 8109400 -87163251 - PB1D10 SINE Alu -12 105 6 2 646 563 302 23 0 chr17 8109452 8109581 -87163070 + RSINE1 SINE B4 2 133 -32 2 646 332 328 53 48 chr17 8109946 8110238 -87162413 - MLT1H LTR MaLR -214 335 1 2 646 495 311 22 79 chr17 8111592 8111770 -87160881 + B4A SINE B4 1 168 -124 2 646 346 165 12 12 chr17 8111791 8111871 -87160780 + GA-rich Low_complexity Low_complexity 4 83 0 2 646 347 194 0 65 chr17 8111882 8111959 -87160692 + B4A SINE B4 201 272 -20 2 646 375 23 0 0 chr17 8111996 8112040 -87160611 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 646 782 197 7 14 chr17 8112559 8112703 -87159948 + B1_Mur2 SINE Alu 2 144 -5 2 646 369 0 0 0 chr17 8112771 8112812 -87159839 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 646 720 0 0 0 chr17 8113626 8113706 -87158945 + (GAGAA)n Simple_repeat Simple_repeat 5 84 0 2 646 1464 181 7 48 chr17 8113810 8114101 -87158550 - RLTR11A2 LTR ERVK 0 527 249 2 646 212 0 36 0 chr17 8114175 8114203 -87158448 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2 646 2349 63 6 57 chr17 8114887 8115223 -87157428 + ORR1A2 LTR MaLR 1 319 -8 2 646 1223 157 40 22 chr17 8115342 8115564 -87157087 - URR1A DNA MER1_type 0 226 1 2 646 207 0 0 0 chr17 8115704 8115727 -87156924 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 646 588 187 254 12 chr17 8115978 8116117 -87156534 + B3 SINE B2 1 181 -35 2 646 212 86 0 28 chr17 8116117 8116153 -87156498 + (CATA)n Simple_repeat Simple_repeat 4 38 0 2 646 588 187 254 12 chr17 8116153 8116186 -87156465 + B3 SINE B2 182 214 -2 2 646 674 281 108 17 chr17 8116755 8116987 -87155664 + B4A SINE B4 36 288 -4 2 646 205 146 0 40 chr17 8117006 8117056 -87155595 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 646 486 88 0 0 chr17 8117943 8118011 -87154640 + (CA)n Simple_repeat Simple_repeat 2 69 0 2 646 216 0 0 0 chr17 8119605 8119629 -87153022 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 646 1161 51 0 0 chr17 8122910 8123048 -87149603 + B1_Mus2 SINE Alu 1 138 -9 2 646 207 0 0 0 chr17 8123048 8123071 -87149580 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 646 234 0 0 0 chr17 8125281 8125307 -87147344 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 647 783 178 7 0 chr17 8128334 8128469 -87144182 + B1_Mus1 SINE Alu 1 136 -12 2 647 747 33 0 0 chr17 8128469 8128559 -87144092 + (TAGA)n Simple_repeat Simple_repeat 1 90 0 2 647 988 183 65 0 chr17 8128567 8128753 -87143898 + B3 SINE B2 19 216 0 2 647 283 145 60 0 chr17 8128949 8129032 -87143619 + (TAGA)n Simple_repeat Simple_repeat 2 89 0 2 647 221 146 0 20 chr17 8129046 8129095 -87143556 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 647 317 306 51 0 chr17 8129099 8129197 -87143454 - PB1D10 SINE Alu -6 111 9 2 647 249 337 28 37 chr17 8129148 8129256 -87143395 - ID_B1 SINE B4 -85 139 33 2 647 237 33 0 0 chr17 8129344 8129374 -87143277 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 2 647 539 214 145 0 chr17 8129374 8129491 -87143160 - B1_Mus2 SINE Alu -13 134 1 2 647 232 279 48 15 chr17 8129720 8129827 -87142824 - MLT1C LTR MaLR -51 416 273 2 647 303 181 40 27 chr17 8129817 8129891 -87142760 + RLTR25B LTR ERVK 424 498 -530 2 647 895 78 0 0 chr17 8129825 8129940 -87142711 + B1_Mus1 SINE Alu 34 148 0 2 647 1314 95 31 16 chr17 8130319 8130511 -87142140 + B2_Mm2 SINE B2 1 195 0 2 647 547 327 12 12 chr17 8130791 8130955 -87141696 + B4A SINE B4 1 164 -128 2 647 401 302 111 23 chr17 8132872 8133089 -87139562 - Arthur1 DNA Tip100 -2 3945 3710 2 647 215 177 0 16 chr17 8133157 8133220 -87139431 + (TA)n Simple_repeat Simple_repeat 2 63 0 2 647 248 308 151 36 chr17 8133223 8133415 -87139236 - Arthur1 DNA Tip100 -301 3646 3433 2 647 1197 228 115 36 chr17 8133727 8134091 -87138560 - MTD LTR MaLR 0 419 27 2 647 534 206 59 0 chr17 8135287 8135389 -87137262 + PB1D10 SINE Alu 3 110 -7 2 647 288 339 170 0 chr17 8135562 8135733 -87136918 + MIRb SINE MIR 30 229 -39 2 647 278 337 177 33 chr17 8136343 8137025 -87135626 + L2a LINE L2 2548 3327 -99 2 647 269 327 79 56 chr17 8137984 8138162 -87134489 - MIR SINE MIR -37 225 44 2 647 214 284 58 29 chr17 8139336 8139405 -87133246 - MIRb SINE MIR -80 188 118 2 647 201 312 16 111 chr17 8139573 8139699 -87132952 + MIRm SINE MIR 160 273 -3 2 647 693 216 5 108 chr17 8140483 8140686 -87131965 - B3A SINE B2 -16 182 1 2 647 705 283 60 32 chr17 8141125 8141377 -87131274 + MLT1D LTR MaLR 2 260 -245 2 647 842 254 89 21 chr17 8141370 8141607 -87131044 - MTE2b LTR MaLR -4 375 123 2 647 436 168 168 0 chr17 8141607 8141702 -87130949 + L1_Mur2 LINE L1 1929 2039 -3838 2 647 21 57 0 0 chr17 8142297 8142332 -87130319 + AT_rich Low_complexity Low_complexity 1 35 0 2 647 189 74 0 0 chr17 8142551 8142578 -87130073 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 647 198 0 0 0 chr17 8142600 8142622 -87130029 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 647 432 0 0 0 chr17 8142622 8142669 -87129982 + (GA)n Simple_repeat Simple_repeat 1 48 0 2 647 278 224 84 84 chr17 8143011 8143118 -87129533 - MTE2b LTR MaLR -272 107 1 2 647 226 261 186 41 chr17 8143733 8143905 -87128746 - L2 LINE L2 -832 2587 2391 2 647 738 148 16 0 chr17 8144052 8144180 -87128471 + URR1B DNA MER1_type 96 225 0 2 647 532 171 180 0 chr17 8144732 8144843 -87127808 + B1_Mur4 SINE Alu 1 131 -19 2 647 2206 32 0 0 chr17 8145069 8145316 -87127335 - LSU-rRNA_Hsa rRNA rRNA -1122 3913 3667 2 647 973 259 230 12 chr17 8145519 8145863 -87126788 - MTD LTR MaLR 0 419 1 2 647 255 215 125 55 chr17 8145876 8145967 -87126684 - Charlie10 DNA MER1_type -4 2818 2717 2 647 5984 67 6 66 chr17 8145967 8146821 -87125830 - RLTR13B4 LTR ERVK 0 803 1 2 647 255 215 125 55 chr17 8146821 8146857 -87125794 - Charlie10 DNA MER1_type -106 2716 2682 2 647 301 292 14 0 chr17 8146857 8146929 -87125722 + ID4 SINE ID 4 76 -7 2 647 253 179 18 0 chr17 8146940 8146996 -87125655 + MER4B-int LTR ERV1 1145 1201 -5557 2 647 308 210 12 0 chr17 8147005 8147086 -87125565 + (TATG)n Simple_repeat Simple_repeat 4 85 0 2 647 28 48 0 0 chr17 8147391 8147433 -87125218 + AT_rich Low_complexity Low_complexity 1 42 0 2 647 267 41 61 0 chr17 8147693 8147742 -87124909 + (TTG)n Simple_repeat Simple_repeat 2 53 0 2 647 1065 89 7 0 chr17 8147791 8147937 -87124714 - B1_Mus1 SINE Alu -1 147 1 2 647 1282 72 21 53 chr17 8147949 8148139 -87124512 - B2_Mm2 SINE B2 -10 185 2 2 647 316 241 122 54 chr17 8150343 8150534 -87122117 + L1MDa LINE L1 1160 1364 -5163 2 647 1165 64 0 0 chr17 8150534 8150675 -87121976 + B1_Mus2 SINE Alu 1 141 -6 2 647 233 239 124 55 chr17 8150675 8150710 -87121941 + L1MDa LINE L1 1365 1402 -5125 2 647 245 303 68 27 chr17 8150774 8150920 -87121731 + L1MDa LINE L1 1577 1728 -4905 2 647 378 337 147 41 chr17 8150927 8151238 -87121413 - MER54B LTR ERVL -482 419 76 2 647 211 267 67 0 chr17 8151237 8151297 -87121354 + BC1_Mm scRNA scRNA 27 90 -62 2 647 505 225 109 32 chr17 8151308 8151592 -87121059 + L1MDa LINE L1 2405 2703 -3834 2 647 291 211 73 68 chr17 8151592 8151710 -87120941 - B3A SINE B2 -6 192 72 2 647 239 280 30 0 chr17 8152164 8152264 -87120387 + MusHAL1 LINE L1 462 564 -2148 2 647 1890 237 54 102 chr17 8152267 8152863 -87119788 - RMER2 LTR ERV1 0 567 1 2 647 225 337 29 38 chr17 8152881 8152986 -87119665 - LTR44 LTR ERV1 -383 136 33 2 647 2096 331 66 52 chr17 8153450 8153580 -87119071 - MuRRS4-int LTR ERV1 -1049 4014 3884 2 647 1192 144 0 0 chr17 8153580 8153761 -87118890 + B2_Mm2 SINE B2 1 181 -14 2 647 2096 331 66 52 chr17 8153761 8155378 -87117273 - MuRRS4-int LTR ERV1 -1180 3883 2242 2 647 1330 85 17 6 chr17 8155468 8155646 -87117005 - B2_Mm2 SINE B2 -14 181 2 2 647 734 236 132 54 chr17 8155647 8155760 -87116891 + RLTR16 LTR ERVK 38 149 -356 2 647 4401 10 0 2 chr17 8155760 8156243 -87116408 + LTRIS_Mm LTR ERV1 1 482 0 2 647 734 238 130 76 chr17 8156243 8156399 -87116252 + RLTR16 LTR ERVK 150 356 -336 2 647 1220 342 72 47 chr17 8156439 8157853 -87114798 - RLTR6-int LTR ERV1 -4772 3006 1557 2 647 567 296 112 82 chr17 8158333 8159014 -87113637 + L1M2 LINE L1 2348 3032 -3111 2 647 376 329 0 20 chr17 8159014 8159160 -87113491 + B1F1 SINE Alu 5 147 -2 2 647 527 299 124 69 chr17 8159160 8159444 -87113207 + L1M2 LINE L1 3017 3338 -2509 2 647 1244 95 26 26 chr17 8159479 8159674 -87112977 - B2_Mm2 SINE B2 0 195 1 2 647 299 200 0 30 chr17 8159704 8159771 -87112880 + B3 SINE B2 1 65 -151 2 647 509 283 31 1 chr17 8159771 8159979 -87112672 - L1M2 LINE L1 -2353 3790 3544 2 647 734 234 26 7 chr17 8160004 8160159 -87112492 + B3 SINE B2 59 216 0 2 647 709 285 85 7 chr17 8160164 8160471 -87112180 + L1M2 LINE L1 3367 3697 -2446 2 647 695 239 172 13 chr17 8160539 8160853 -87111798 + L1M2 LINE L1 4339 4702 -1441 2 647 322 325 0 0 chr17 8160856 8160936 -87111715 + PB1D10 SINE Alu 34 113 -4 3 647 293 239 286 9 chr17 8161094 8161273 -87111378 + L1MD LINE L1 5230 5458 -901 3 647 534 241 25 105 chr17 8161544 8161706 -87110945 + B3A SINE B2 50 198 0 3 647 482 280 0 0 chr17 8161886 8162004 -87110647 + L1MA5 LINE L1 6183 6300 0 3 647 816 249 113 19 chr17 8162010 8162276 -87110375 + B4 SINE B4 2 292 0 3 647 483 18 0 0 chr17 8162661 8162717 -87109934 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 647 2575 141 19 19 chr17 8163413 8163834 -87108817 - MTC LTR MaLR 0 421 1 3 647 234 0 0 0 chr17 8164840 8164866 -87107785 + (TG)n Simple_repeat Simple_repeat 2 27 0 3 647 180 226 94 0 chr17 8164980 8165033 -87107618 - MIR SINE MIR -93 169 112 3 647 358 320 39 31 chr17 8165470 8165599 -87107052 - B1F1 SINE Alu -17 132 3 3 647 1112 69 7 20 chr17 8168118 8168266 -87104385 + B1_Mus2 SINE Alu 2 147 0 3 647 198 0 0 0 chr17 8168266 8168288 -87104363 + (A)n Simple_repeat Simple_repeat 1 22 0 3 647 297 0 0 0 chr17 8168367 8168400 -87104251 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 647 422 136 0 290 chr17 8169380 8169450 -87103201 + MERVL_2A-int LTR ERVL 2 69 -5692 3 647 679 206 8 8 chr17 8169450 8169582 -87103069 + B1_Mus1 SINE Alu 3 134 -14 3 647 422 136 0 290 chr17 8169582 8169656 -87102995 + MERVL_2A-int LTR ERVL 70 104 -5657 3 647 552 233 15 30 chr17 8169656 8169789 -87102862 - MT2A LTR ERVL -402 131 1 3 647 3027 78 10 0 chr17 8170033 8170429 -87102222 - MTB LTR MaLR 0 400 1 3 647 33 0 0 0 chr17 8172334 8172367 -87100284 + AT_rich Low_complexity Low_complexity 1 33 0 3 647 36 40 0 0 chr17 8173754 8173804 -87098847 + AT_rich Low_complexity Low_complexity 1 50 0 3 647 867 331 101 11 chr17 8173859 8174385 -87098266 - Lx8 LINE L1 -6 7467 6895 3 647 907 167 47 21 chr17 8174409 8174599 -87098052 - B2_Mm2 SINE B2 0 195 1 3 647 200 59 29 0 chr17 8174611 8174645 -87098006 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 647 4415 49 0 0 chr17 8174648 8175178 -87097473 - L1Md_F3 LINE L1 -14 6570 6041 3 647 272 313 40 11 chr17 8176599 8176743 -87095908 + L1MA4 LINE L1 5804 5930 -370 3 647 286 100 33 0 chr17 8176760 8176820 -87095831 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 647 217 327 0 50 chr17 8176859 8176978 -87095673 + G-rich Low_complexity Low_complexity 5 117 0 3 647 220 268 19 93 chr17 8177272 8177379 -87095272 - B4 SINE B4 -191 101 3 3 647 538 299 22 7 chr17 8177566 8177704 -87094947 + RSINE1 SINE B4 26 165 0 3 647 893 69 114 0 chr17 8178142 8178273 -87094378 + URR1B DNA MER1_type 80 225 0 3 647 461 189 150 27 chr17 8178147 8178294 -87094357 - CYRA11_Mm Unknown Y-chromosome -305 312 148 3 647 518 302 26 20 chr17 8178703 8178855 -87093796 + L1M4 LINE L1 278 430 -6112 3 647 1230 61 0 0 chr17 8179021 8179169 -87093482 + B1_Mus1 SINE Alu 1 148 0 3 647 302 309 24 0 chr17 8179189 8179273 -87093378 + L1MEg LINE L1 1884 1969 -4115 3 647 404 287 92 39 chr17 8179286 8179623 -87093028 + L1M4 LINE L1 2296 2650 -3996 3 647 257 301 40 24 chr17 8180509 8180635 -87092016 - L1M6 LINE L1 -5023 1473 1346 3 647 1352 54 15 66 chr17 8180757 8180955 -87091696 - B2_Mm2 SINE B2 -7 188 1 3 647 658 236 142 11 chr17 8181124 8181300 -87091351 - B3 SINE B2 -17 199 1 3 647 616 266 153 17 chr17 8181773 8182014 -87090637 + MLT1A0 LTR MaLR 84 357 -8 3 647 369 371 82 35 chr17 8182125 8182289 -87090362 + MTEa LTR MaLR 1 184 -195 3 647 2235 167 124 105 chr17 8182289 8182784 -87089867 + MT2B LTR ERVL 1 557 -44 3 647 273 119 0 0 chr17 8182784 8182826 -87089825 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 647 2235 167 124 105 chr17 8182826 8182920 -87089731 + MT2B LTR ERVL 558 601 0 3 647 369 371 82 35 chr17 8182920 8183012 -87089639 + MTEa LTR MaLR 185 269 -110 3 647 2980 30 0 0 chr17 8183056 8183393 -87089258 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 647 16115 23 3 1 chr17 8183393 8185192 -87087459 - IAPEz-int LTR ERVK 0 6481 4678 3 647 1857 115 4 4 chr17 8185210 8185472 -87087179 - IAPEz-int LTR ERVK -5183 2497 2236 3 647 460 66 0 32 chr17 8185461 8185524 -87087127 - IAPEz-int LTR ERVK -5062 1419 1359 3 647 4740 49 71 14 chr17 8185524 8186144 -87086507 - IAPEz-int LTR ERVK -5819 662 8 3 647 2991 27 0 0 chr17 8186144 8186481 -87086170 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 647 261 304 51 0 chr17 8186481 8186560 -87086091 + MTEa LTR MaLR 280 362 -8 3 647 3129 102 32 52 chr17 8187436 8187933 -87084718 - Lx LINE L1 -7 6647 6161 3 647 1434 202 4 4 chr17 8187933 8188182 -87084469 - MTD LTR MaLR -170 249 1 3 647 21 0 0 0 chr17 8188560 8188581 -87084070 + AT_rich Low_complexity Low_complexity 1 21 0 3 647 316 304 0 0 chr17 8188861 8188940 -87083711 + ID4 SINE ID 5 83 0 3 647 475 265 113 72 chr17 8190417 8190773 -87081878 - ORR1D2 LTR MaLR 0 379 6 3 647 361 228 160 16 chr17 8190831 8190956 -87081695 + L1MDa LINE L1 112 254 -6379 3 647 292 336 116 30 chr17 8191196 8191524 -87081127 + L1MDa LINE L1 935 1290 -5343 3 647 372 319 27 68 chr17 8191863 8192011 -87080640 + B1F SINE Alu 3 144 -5 3 647 302 292 131 89 chr17 8193860 8194074 -87078577 + MLT1C LTR MaLR 14 236 -231 3 647 3990 183 122 20 chr17 8194828 8194927 -87077724 - Lx9 LINE L1 -23 7621 7481 3 647 372 94 0 0 chr17 8194927 8194980 -87077671 + (ATG)n Simple_repeat Simple_repeat 1 53 0 3 647 3990 183 122 20 chr17 8194980 8195807 -87076844 - Lx9 LINE L1 -164 7480 6602 3 647 790 167 8 21 chr17 8197481 8197722 -87074929 + CT-rich Low_complexity Low_complexity 1 237 0 3 647 326 355 26 26 chr17 8197722 8197878 -87074773 - HAL1-3A_ME LINE L1 -419 2439 2284 3 647 1260 134 5 0 chr17 8200618 8200812 -87071839 - B2_Mm2 SINE B2 0 195 1 3 647 207 0 0 0 chr17 8201036 8201059 -87071592 + (A)n Simple_repeat Simple_repeat 1 23 0 3 647 532 191 15 15 chr17 8202986 8203119 -87069532 + (CATA)n Simple_repeat Simple_repeat 4 136 0 3 647 332 204 0 0 chr17 8203119 8203173 -87069478 + HAL1-3A_ME LINE L1 1975 2028 -830 3 647 859 294 99 21 chr17 8203222 8203597 -87069054 + L1MB3 LINE L1 5562 5965 -218 3 647 697 258 175 92 chr17 8203723 8204060 -87068591 + MTE2a LTR MaLR 1 365 -14 3 647 4912 111 30 17 chr17 8204653 8205406 -87067245 + L1_Mur2 LINE L1 4706 5468 -409 3 647 2861 185 76 2 chr17 8205398 8205939 -87066712 + Lx5 LINE L1 6470 7050 0 3 647 273 216 65 103 chr17 8206336 8206491 -87066160 + RMER15 LTR ERVL 2 150 -425 3 647 607 276 139 16 chr17 8206519 8206777 -87065874 + RMER15 LTR ERVL 286 575 0 3 647 1291 259 152 63 chr17 8207267 8208056 -87064595 - RMER13A LTR ERVK 0 860 2 3 647 1879 156 71 73 chr17 8208833 8209228 -87063423 + ORR1B1 LTR MaLR 1 394 0 3 647 252 290 75 11 chr17 8210875 8210969 -87061682 - Tigger5 DNA MER2_type -17 2389 2290 3 647 570 339 30 22 chr17 8210968 8211200 -87061451 - Tigger5 DNA MER2_type -2170 236 3 3 647 316 294 198 41 chr17 8211219 8211505 -87061146 + MLT1C LTR MaLR 108 465 -2 3 647 417 215 32 0 chr17 8211520 8211613 -87061038 + PB1D10 SINE Alu 1 96 -21 3 647 269 151 0 19 chr17 8211776 8211830 -87060821 + GA-rich Low_complexity Low_complexity 1 53 0 3 647 1138 65 0 0 chr17 8213402 8213540 -87059111 + B1_Mus2 SINE Alu 1 138 -9 3 647 1125 114 6 17 chr17 8215291 8215469 -87057182 + B2_Mm2 SINE B2 2 177 -18 3 647 1774 167 84 11 chr17 8217183 8217373 -87055278 + RMER17C LTR ERVK 1 214 -196 3 647 288 0 0 0 chr17 8217373 8217405 -87055246 + (TC)n Simple_repeat Simple_repeat 2 33 0 3 647 1774 167 84 11 chr17 8217405 8217595 -87055056 + RMER17C LTR ERVK 215 408 -2 3 647 2176 70 0 3 chr17 8217949 8218241 -87054410 + L1Md_F3 LINE L1 5326 5615 -541 3 647 8241 44 5 0 chr17 8218241 8219234 -87053417 + L1Md_F3 LINE L1 5587 6584 0 3 647 556 294 78 23 chr17 8221850 8222069 -87050582 - MLT1B LTR MaLR -47 343 113 3 647 420 223 0 64 chr17 8223686 8223796 -87048855 - PB1D10 SINE Alu 0 117 15 3 647 1104 132 6 11 chr17 8225509 8225685 -87046966 - URR1B DNA MER1_type 0 225 51 3 647 1939 67 4 0 chr17 8225685 8225923 -87046728 + Lx LINE L1 5943 6181 -473 3 647 1154 106 29 34 chr17 8225923 8226128 -87046523 + Lx LINE L1 6451 6654 0 3 647 843 39 0 0 chr17 8227437 8227540 -87045111 + (GAAA)n Simple_repeat Simple_repeat 4 106 0 3 647 220 27 26 26 chr17 8227627 8227665 -87044986 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 3 647 364 214 83 0 chr17 8227678 8227762 -87044889 - ID_B1 SINE B4 -40 184 94 3 647 396 0 0 0 chr17 8227783 8227827 -87044824 + (TC)n Simple_repeat Simple_repeat 1 44 0 3 647 243 0 0 0 chr17 8227827 8227853 -87044798 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 647 639 142 47 0 chr17 8227855 8227961 -87044690 - Lx5 LINE L1 -147 6903 6793 3 647 986 142 7 0 chr17 8228020 8228168 -87044483 - B1_Mur4 SINE Alu 0 150 2 3 647 660 272 42 14 chr17 8228227 8228443 -87044208 + ID_B1 SINE B4 3 224 0 3 647 310 229 120 40 chr17 8230560 8230660 -87041991 - PB1D10 SINE Alu -1 116 9 3 647 195 72 47 23 chr17 8230697 8230740 -87041911 + (TTCTC)n Simple_repeat Simple_repeat 3 46 0 3 647 227 299 39 0 chr17 8230749 8230826 -87041825 - ID4_ SINE ID -3 80 1 3 647 288 283 19 9 chr17 8230832 8230939 -87041712 - PB1D10 SINE Alu -7 110 3 3 647 741 293 69 122 chr17 8231547 8232120 -87040531 - RMER20B LTR ERVK -16 611 19 3 647 729 301 18 96 chr17 8234424 8234696 -87037955 + B4A SINE B4 4 254 -38 3 647 617 128 8 23 chr17 8235151 8235279 -87037372 + CT-rich Low_complexity Low_complexity 2 127 0 3 647 1035 72 15 19 chr17 8236247 8236516 -87036135 + (CA)n Simple_repeat Simple_repeat 1 268 0 3 647 413 266 52 17 chr17 8237504 8237619 -87035032 - B1_Mur1 SINE Alu -13 136 18 3 647 266 178 94 13 chr17 8238186 8238345 -87034306 + (ATG)n Simple_repeat Simple_repeat 1 172 0 3 647 655 265 0 45 chr17 8240160 8240314 -87032337 + RSINE1 SINE B4 5 151 -14 3 647 476 105 0 13 chr17 8240320 8240397 -87032254 + (CATA)n Simple_repeat Simple_repeat 1 76 0 3 647 32 0 0 0 chr17 8240663 8240695 -87031956 + AT_rich Low_complexity Low_complexity 1 32 0 3 647 1812 123 64 67 chr17 8241609 8241939 -87030712 + ORR1A4 LTR MaLR 1 329 0 3 647 399 275 73 0 chr17 8242943 8243052 -87029599 + RSINE1 SINE B4 23 139 -26 4 647 257 301 42 21 chr17 8243254 8243349 -87029302 + MIR SINE MIR 87 183 -79 4 647 468 62 0 0 chr17 8243614 8243678 -87028973 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 647 439 300 104 85 chr17 8243771 8244041 -87028610 + B4 SINE B4 1 275 -17 4 647 440 117 0 13 chr17 8244128 8244206 -87028445 + (CA)n Simple_repeat Simple_repeat 2 78 0 4 647 2302 103 69 14 chr17 8245753 8246099 -87026552 + MT2B LTR ERVL 2 366 -235 4 647 233 220 0 0 chr17 8246366 8246416 -87026235 - L1MB5 LINE L1 -10 6164 6115 4 647 258 32 0 0 chr17 8247090 8247121 -87025530 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 647 279 0 0 0 chr17 8247132 8247163 -87025488 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 4 647 779 59 0 10 chr17 8247189 8247291 -87025360 - B2_Mm2 SINE B2 -94 101 1 4 647 1898 143 90 44 chr17 8247898 8248263 -87024388 - MTC LTR MaLR -19 402 21 4 647 643 269 101 36 chr17 8248262 8248509 -87024142 + MLT2D LTR ERVL 102 364 -50 4 647 283 303 146 148 chr17 8249023 8249802 -87022849 + Charlie2a DNA MER1_type 1954 2731 -130 4 647 1842 158 14 67 chr17 8250089 8250522 -87022129 + RMER17C LTR ERVK 1 410 0 4 647 297 276 51 0 chr17 8250770 8250868 -87021783 + MLT1A1 LTR MaLR 299 401 -7 4 647 303 319 151 13 chr17 8250904 8251076 -87021575 + MLT1A0 LTR MaLR 50 233 -141 4 647 332 325 53 53 chr17 8251170 8251414 -87021237 - L1M4b LINE L1 -5362 1972 1729 4 647 21 0 0 0 chr17 8251818 8251839 -87020812 + AT_rich Low_complexity Low_complexity 1 21 0 4 647 558 164 48 0 chr17 8251989 8252093 -87020558 + URR1B DNA MER1_type 116 224 -1 4 647 1863 171 34 14 chr17 8252093 8252449 -87020202 + L1_Rod LINE L1 306 668 -6504 4 647 680 124 97 0 chr17 8252449 8252562 -87020089 + RLTR11A2 LTR ERVK 1 124 -403 4 647 378 0 0 0 chr17 8252569 8252611 -87020040 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 647 2112 92 3 69 chr17 8252612 8252961 -87019690 + IAPLTR1a_Mm LTR ERVK 1 326 -11 4 647 2462 134 48 5 chr17 8252974 8253372 -87019279 + RLTR11A2 LTR ERVK 113 527 0 4 647 276 225 124 0 chr17 8253372 8253461 -87019190 + L1_Rod LINE L1 663 762 -6410 4 647 1153 289 86 44 chr17 8253578 8254411 -87018240 + L1MB3 LINE L1 4135 5002 -1138 4 647 1936 204 19 31 chr17 8254415 8254834 -87017817 - MTD LTR MaLR -5 414 1 4 647 956 293 166 27 chr17 8254838 8255455 -87017196 + L1MB3 LINE L1 5008 5715 -468 4 647 249 234 16 0 chr17 8255455 8255519 -87017132 + ID4_ SINE ID 2 66 -17 4 647 956 296 158 34 chr17 8255519 8255902 -87016749 + L1MB3 LINE L1 5716 6135 -48 4 647 1019 202 20 5 chr17 8255949 8256148 -87016503 + B3 SINE B2 1 202 -14 4 647 620 328 79 22 chr17 8256697 8257015 -87015636 - MER82 DNA MER2_type -35 618 283 4 647 227 300 17 0 chr17 8257145 8257205 -87015446 - MER82 DNA MER2_type -569 84 24 4 648 1977 100 3 71 chr17 8257596 8257920 -87014731 + ORR1A2 LTR MaLR 24 325 -2 4 648 242 342 0 77 chr17 8258534 8258651 -87014000 - Tigger14a DNA MER2_type -128 196 89 4 648 613 255 14 0 chr17 8258693 8258834 -87013817 + ID_B1 SINE B4 70 212 -12 4 648 464 258 50 50 chr17 8258714 8258853 -87013798 + B1F SINE Alu 11 149 0 4 648 288 0 0 0 chr17 8259368 8259400 -87013251 + (A)n Simple_repeat Simple_repeat 1 32 0 4 648 557 296 41 6 chr17 8259917 8260087 -87012564 - MLT1C LTR MaLR -3 464 289 4 648 1684 231 56 44 chr17 8260472 8260953 -87011698 - RCHARR1 DNA MER1_type -7 967 481 4 648 644 275 0 7 chr17 8260972 8261111 -87011540 - ID_B1 SINE B4 0 224 87 4 648 1171 62 0 0 chr17 8261127 8261271 -87011380 - B1_Mus1 SINE Alu -2 146 3 4 648 26 30 0 0 chr17 8261281 8261314 -87011337 + AT_rich Low_complexity Low_complexity 1 33 0 4 648 497 265 68 0 chr17 8261334 8261451 -87011200 - RSINE1 SINE B4 -38 127 3 4 648 669 277 92 62 chr17 8261451 8261723 -87010928 - RCHARR1 DNA MER1_type -477 497 218 4 648 559 161 35 0 chr17 8261816 8261903 -87010748 - RCHARR1 DNA MER1_type -882 92 3 4 648 402 21 0 0 chr17 8262101 8262148 -87010503 + (TATG)n Simple_repeat Simple_repeat 1 47 0 4 648 504 0 0 0 chr17 8262243 8262299 -87010352 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 4 648 869 146 7 14 chr17 8262302 8262441 -87010210 - B1_Mur4 SINE Alu -12 138 1 4 648 23 33 0 0 chr17 8262507 8262537 -87010114 + AT_rich Low_complexity Low_complexity 1 30 0 4 648 423 0 0 0 chr17 8263288 8263335 -87009316 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 648 288 0 0 0 chr17 8263517 8263549 -87009102 + (CTG)n Simple_repeat Simple_repeat 1 32 0 4 648 548 158 0 0 chr17 8263905 8263981 -87008670 - tRNA-Lys-AAG tRNA tRNA 0 76 1 4 648 2662 52 62 0 chr17 8264084 8264409 -87008242 + ORR1A1 LTR MaLR 1 345 -1 4 648 446 293 43 0 chr17 8264998 8265114 -87007537 - RSINE1 SINE B4 -7 158 38 4 648 332 227 260 67 chr17 8266235 8266504 -87006147 - L1MC4 LINE L1 -1014 7028 6708 4 648 618 301 5 48 chr17 8266614 8266820 -87005831 + B3A SINE B2 2 198 0 4 648 326 287 39 0 chr17 8267984 8268113 -87004538 + (CATA)n Simple_repeat Simple_repeat 2 135 0 4 648 1106 43 0 7 chr17 8268514 8268653 -87003998 - B1_Mus1 SINE Alu 0 148 11 4 648 2182 150 58 48 chr17 8268653 8269066 -87003585 + MTC LTR MaLR 5 421 0 4 648 317 203 31 0 chr17 8269116 8269180 -87003471 + ID4 SINE ID 4 69 -14 4 648 3236 56 2 5 chr17 8269314 8269711 -87002940 + MTA_Mm LTR MaLR 1 396 0 4 648 396 297 220 37 chr17 8270648 8270893 -87001758 + MLT1B LTR MaLR 27 316 -74 4 648 243 0 0 0 chr17 8271090 8271117 -87001534 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 4 648 1208 118 8 0 chr17 8271191 8271226 -87001425 - B2_Mm1a SINE B2 -3 192 157 4 648 243 0 0 0 chr17 8271226 8271253 -87001398 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 4 648 1208 88 12 0 chr17 8271253 8271408 -87001243 - B2_Mm1a SINE B2 -36 157 2 4 648 221 250 0 0 chr17 8272139 8272183 -87000468 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 648 484 284 53 37 chr17 8272840 8273030 -86999621 - MLT1A0 LTR MaLR -172 193 1 4 648 183 42 0 0 chr17 8273357 8273381 -86999270 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 4 648 234 62 0 0 chr17 8273583 8273615 -86999036 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4 648 376 292 88 40 chr17 8275020 8275270 -86997381 - MamRep434 DNA TcMar -6 420 159 4 648 554 287 153 17 chr17 8275444 8275685 -86996966 - MER2 DNA MER2_type -62 283 10 4 648 431 250 230 30 chr17 8275961 8276126 -86996525 - ID_B1 SINE B4 -20 204 7 4 648 333 0 0 0 chr17 8276352 8276389 -86996262 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 648 431 319 117 3 chr17 8276389 8276677 -86995974 - L1M4 LINE L1 -2280 5715 5390 4 648 410 294 63 59 chr17 8276687 8276940 -86995711 - Lx7 LINE L1 -1687 6009 5756 4 648 3475 286 64 57 chr17 8277194 8278489 -86994162 - Lx7 LINE L1 -161 5719 4386 4 648 2884 65 75 0 chr17 8278489 8278861 -86993790 - MTB LTR MaLR 0 400 1 4 648 3475 286 64 57 chr17 8278861 8279137 -86993514 - Lx7 LINE L1 -1495 4385 4137 4 648 412 231 21 46 chr17 8279139 8279270 -86993381 - L1M4 LINE L1 -1195 4951 4823 4 648 377 353 40 59 chr17 8279364 8279617 -86993034 - L1M4 LINE L1 -1320 4826 4579 4 648 467 233 85 99 chr17 8279692 8279964 -86992687 - L1_Mur3 LINE L1 -362 5518 5251 4 648 203 116 70 28 chr17 8279967 8280038 -86992613 + (TTATA)n Simple_repeat Simple_repeat 3 76 0 4 648 369 0 0 0 chr17 8280047 8280088 -86992563 + (TTA)n Simple_repeat Simple_repeat 2 42 0 4 648 926 232 37 20 chr17 8280102 8280348 -86992303 - L1_Rod LINE L1 -645 5202 4953 4 648 234 0 0 0 chr17 8280357 8280383 -86992268 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 648 546 16 0 0 chr17 8280383 8280446 -86992205 + (TGG)n Simple_repeat Simple_repeat 3 65 0 4 648 378 286 34 89 chr17 8280457 8280603 -86992048 - RSINE1 SINE B4 -25 140 3 4 648 358 251 172 23 chr17 8280624 8280843 -86991808 - L1M4 LINE L1 -1655 4491 4243 4 648 710 326 16 42 chr17 8282150 8282339 -86990312 + B4A SINE B4 23 206 -86 4 648 215 219 0 0 chr17 8282369 8282410 -86990241 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 648 207 175 0 0 chr17 8282469 8282526 -86990125 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 648 201 231 0 0 chr17 8283258 8283297 -86989354 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 648 815 57 202 16 chr17 8283937 8284050 -86988601 + B1_Mus1 SINE Alu 2 139 -9 4 648 261 0 0 0 chr17 8284050 8284079 -86988572 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 4 648 425 59 29 0 chr17 8284091 8284159 -86988492 + (CAAAAA)n Simple_repeat Simple_repeat 3 72 0 4 648 531 0 0 0 chr17 8285340 8285399 -86987252 + (TC)n Simple_repeat Simple_repeat 2 60 0 4 648 644 252 53 70 chr17 8287129 8287300 -86985351 + B3A SINE B2 1 168 -30 4 648 762 197 66 0 chr17 8287370 8287507 -86985144 + B1_Mur2 SINE Alu 2 147 -2 4 648 264 288 0 17 chr17 8288183 8288243 -86984408 + B1F1 SINE Alu 7 65 -84 4 648 236 341 57 0 chr17 8288240 8288328 -86984323 + MLT1A0 LTR MaLR 273 365 0 4 648 515 259 43 7 chr17 8292614 8292754 -86979897 - RSINE1 SINE B4 0 165 21 4 648 540 0 0 0 chr17 8293264 8293324 -86979327 + (TC)n Simple_repeat Simple_repeat 2 61 0 4 648 324 227 136 27 chr17 8294697 8294828 -86977823 - MIRb SINE MIR -30 238 86 4 648 216 0 0 0 chr17 8294973 8294997 -86977654 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 648 503 204 10 14 chr17 8297106 8297408 -86975243 + (CA)n Simple_repeat Simple_repeat 1 300 0 4 648 332 284 191 34 chr17 8297584 8297788 -86974863 + MLT1C LTR MaLR 172 407 -60 4 648 369 0 0 0 chr17 8298184 8298225 -86974426 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 648 24 32 0 0 chr17 8298668 8298699 -86973952 + AT_rich Low_complexity Low_complexity 1 31 0 4 648 420 20 0 0 chr17 8299268 8299317 -86973334 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 648 273 289 81 6 chr17 8299887 8300047 -86972604 - L1MA6 LINE L1 -27 6273 6102 4 648 534 261 60 0 chr17 8300052 8300186 -86972465 + ID_B1 SINE B4 83 224 0 4 648 3903 77 2 50 chr17 8300827 8301386 -86971265 + Lx3_Mus LINE L1 6478 7009 0 5 648 2257 74 16 0 chr17 8301502 8301811 -86970840 - RMER12 LTR ERVK -607 715 402 5 648 449 254 35 61 chr17 8302080 8302266 -86970385 + RNLTR23 LTR ERVK 484 642 0 5 648 2027 134 34 6 chr17 8302327 8302650 -86970001 - Lx3_Mus LINE L1 -12 6997 6666 5 648 4958 63 12 5 chr17 8302650 8303306 -86969345 + L1_Mur1 LINE L1 4742 5402 -484 5 648 1441 65 43 0 chr17 8303313 8303498 -86969153 - B2_Mm2 SINE B2 -2 193 1 5 648 2682 97 16 10 chr17 8303499 8303883 -86968768 - RMER12 LTR ERVK -936 386 1 5 648 1314 78 44 0 chr17 8303896 8304076 -86968575 + B2_Mm2 SINE B2 1 188 -7 5 648 698 251 279 12 chr17 8304091 8304349 -86968302 - ORR1D2 LTR MaLR -43 327 1 5 648 276 344 61 2 chr17 8304443 8304628 -86968023 + MER57D LTR ERV1 45 247 -164 5 648 297 0 0 0 chr17 8305356 8305389 -86967262 + (TC)n Simple_repeat Simple_repeat 2 34 0 5 648 315 0 0 0 chr17 8305389 8305423 -86967228 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 648 491 320 164 63 chr17 8305751 8306038 -86966613 + MTEa LTR MaLR 2 317 -62 5 648 236 219 60 45 chr17 8307115 8307182 -86965469 + B3A SINE B2 2 69 -129 5 648 264 59 0 0 chr17 8307209 8307243 -86965408 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 648 288 242 326 0 chr17 8307968 8308063 -86964588 + RSINE1 SINE B4 2 127 -38 5 648 821 211 12 12 chr17 8308417 8308580 -86964071 + B3A SINE B2 36 198 0 5 648 578 262 21 21 chr17 8309646 8309790 -86962861 - Lx9 LINE L1 -940 6704 6561 5 648 1040 149 6 6 chr17 8310079 8310248 -86962403 - URR1B DNA MER1_type 0 225 57 5 648 210 197 306 16 chr17 8310315 8310377 -86962274 + PB1D10 SINE Alu 17 96 -21 5 648 578 196 62 9 chr17 8310429 8310542 -86962109 + MTD LTR MaLR 1 119 -251 5 648 607 232 32 44 chr17 8310663 8310821 -86961830 - RSINE1 SINE B4 -6 159 4 5 648 279 286 0 0 chr17 8310918 8311002 -86961649 + L1ME2z LINE L1 6285 6368 -76 5 648 225 0 0 0 chr17 8311092 8311117 -86961534 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 5 648 328 295 57 0 chr17 8311154 8311259 -86961392 - PB1D9 SINE Alu 0 120 10 5 648 183 317 0 16 chr17 8311454 8311515 -86961136 + MER5B DNA MER1_type 113 172 -6 5 648 994 226 124 28 chr17 8312366 8312657 -86959994 + MTD LTR MaLR 84 402 -17 5 648 424 261 179 0 chr17 8314914 8315048 -86957603 + RSINE1 SINE B4 4 161 -4 5 648 372 200 0 0 chr17 8315052 8315132 -86957519 + (CATA)n Simple_repeat Simple_repeat 3 82 0 5 648 233 0 62 0 chr17 8316631 8316663 -86955988 + (GGGTG)n Simple_repeat Simple_repeat 3 36 0 5 648 337 335 94 0 chr17 8316791 8316961 -86955690 + L1MC4a LINE L1 6447 6632 -1250 5 648 863 269 97 60 chr17 8317946 8318331 -86954320 + RMER13A LTR ERVK 2 392 -468 5 648 370 334 72 58 chr17 8318387 8318684 -86953967 + RMER13A LTR ERVK 591 865 -43 5 648 1322 55 21 37 chr17 8319171 8319361 -86953290 + B2_Mm2 SINE B2 1 187 -8 5 648 319 330 53 44 chr17 8321031 8321127 -86951524 + RSINE1 SINE B4 51 151 -14 5 648 351 0 0 0 chr17 8321127 8321166 -86951485 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 648 319 330 53 44 chr17 8321166 8321183 -86951468 + RSINE1 SINE B4 152 165 0 5 648 497 194 0 46 chr17 8322185 8322293 -86950358 + B1_Mur3 SINE Alu 47 149 0 5 648 205 195 0 24 chr17 8322376 8322418 -86950233 + CT-rich Low_complexity Low_complexity 1 41 0 5 648 228 282 136 34 chr17 8322775 8322922 -86949729 + RMER15 LTR ERVL 403 564 -11 5 648 192 40 0 0 chr17 8323045 8323070 -86949581 + (CAGAGA)n Simple_repeat Simple_repeat 2 26 0 5 648 279 0 0 0 chr17 8326321 8326352 -86946299 + (CAG)n Simple_repeat Simple_repeat 1 31 0 5 648 229 310 24 81 chr17 8326616 8326739 -86945912 - RLTR25B LTR ERVK -471 557 442 5 648 839 197 13 13 chr17 8326630 8326779 -86945872 - B1_Mur1 SINE Alu 0 149 1 5 648 251 290 38 48 chr17 8327224 8327329 -86945322 - MLT1A0 LTR MaLR -171 194 91 5 648 541 255 36 48 chr17 8327521 8327686 -86944965 + RSINE1 SINE B4 3 165 0 5 648 369 62 0 0 chr17 8328664 8328712 -86943939 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 648 669 257 67 36 chr17 8328712 8328906 -86943745 + B3 SINE B2 7 206 -10 5 648 478 302 112 35 chr17 8331058 8331169 -86941482 + L1MC2 LINE L1 5869 5976 -368 5 648 5218 131 47 106 chr17 8331169 8332214 -86940437 + RLTR13C1 LTR ERVK 1 983 0 5 648 478 302 112 35 chr17 8332214 8332414 -86940237 + L1MC2 LINE L1 5977 6204 -140 5 648 1145 51 0 0 chr17 8332529 8332667 -86939984 + B1_Mus1 SINE Alu 2 139 -9 5 648 330 87 0 0 chr17 8332669 8332715 -86939936 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 5 648 511 274 67 0 chr17 8333324 8333459 -86939192 + U4 snRNA snRNA 1 144 -1 5 648 206 250 0 0 chr17 8334969 8335021 -86937630 + (TTTA)n Simple_repeat Simple_repeat 4 55 0 5 648 1006 186 34 19 chr17 8335029 8335237 -86937414 + B3 SINE B2 1 211 -5 5 648 261 139 0 0 chr17 8336009 8336052 -86936599 + (CATA)n Simple_repeat Simple_repeat 4 46 0 5 648 303 28 0 0 chr17 8337057 8337093 -86935558 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 648 338 254 43 71 chr17 8337585 8337690 -86934961 + MLT1B LTR MaLR 73 178 -289 5 648 1647 199 42 12 chr17 8337698 8337875 -86934776 + ORR1D1 LTR MaLR 1 176 -198 5 648 207 0 0 0 chr17 8337875 8337898 -86934753 + (TC)n Simple_repeat Simple_repeat 2 24 0 5 648 1647 199 42 12 chr17 8337898 8338056 -86934595 + ORR1D1 LTR MaLR 177 346 -28 5 648 252 295 93 28 chr17 8338057 8338165 -86934486 + MLT1B LTR MaLR 211 325 -142 5 648 424 191 51 110 chr17 8339551 8339669 -86932982 + MT2B LTR ERVL 168 278 -323 5 648 996 70 0 0 chr17 8339566 8339694 -86932957 + B1_Mus2 SINE Alu 18 145 -2 5 648 294 95 0 0 chr17 8339712 8339754 -86932897 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 648 306 50 0 0 chr17 8340059 8340099 -86932552 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 648 362 256 11 0 chr17 8341584 8341674 -86930977 - RMER30 DNA MER1_type 0 202 112 5 648 257 314 22 34 chr17 8342051 8342140 -86930511 - MER92C LTR ERV1 -409 145 58 5 648 309 242 15 0 chr17 8342291 8342357 -86930294 + Arthur1A DNA Tip100 46 112 -65 5 648 529 175 61 10 chr17 8342367 8342465 -86930186 - B1_Mur1 SINE Alu -2 147 45 5 648 180 125 0 0 chr17 8342488 8342520 -86930131 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 5 648 255 246 116 0 chr17 8344585 8344654 -86927997 + MLT1A LTR MaLR 2 78 -330 5 648 262 317 86 67 chr17 8344645 8344965 -86927686 + MLT1A LTR MaLR 33 367 -23 5 648 366 242 50 55 chr17 8345024 8345189 -86927462 - MTEa LTR MaLR -7 372 205 5 648 1151 62 14 0 chr17 8345714 8345859 -86926792 - B1_Mus2 SINE Alu 0 147 1 5 648 250 281 71 40 chr17 8346272 8346398 -86926253 + MLT1A LTR MaLR 464 593 -2 5 648 729 233 13 7 chr17 8346772 8346923 -86925728 + RSINE1 SINE B4 13 164 -1 5 648 2831 131 30 22 chr17 8346932 8347394 -86925257 - RMER4A LTR ERVK 0 466 1 5 648 27 87 0 0 chr17 8347405 8347474 -86925177 + AT_rich Low_complexity Low_complexity 1 69 0 5 648 248 279 48 6 chr17 8347474 8347581 -86925070 + L1MC4 LINE L1 6644 6836 -1206 5 648 555 274 0 0 chr17 8349326 8349439 -86923212 - RSINE1 SINE B4 -50 115 3 5 648 251 295 107 133 chr17 8349461 8349731 -86922920 - ORR1E LTR MaLR 0 359 97 5 648 690 290 191 35 chr17 8349790 8350214 -86922437 - RMER5 LTR ERV1 0 534 45 5 648 251 295 240 24 chr17 8350405 8350530 -86922121 - RSINE1 SINE B4 -12 153 2 5 648 313 340 38 25 chr17 8350541 8350698 -86921953 - L1ME2 LINE L1 -66 6098 5940 5 648 646 291 78 3 chr17 8350710 8350993 -86921658 - L1ME2 LINE L1 -273 5891 5588 5 648 213 167 48 0 chr17 8351263 8351305 -86921346 - B3A SINE B2 -154 44 1 5 648 1223 68 0 0 chr17 8351391 8351538 -86921113 + B1_Mus1 SINE Alu 2 148 0 5 648 279 0 0 0 chr17 8351538 8351569 -86921082 + (A)n Simple_repeat Simple_repeat 1 31 0 5 648 25 0 0 0 chr17 8351971 8351996 -86920655 + AT_rich Low_complexity Low_complexity 1 25 0 5 648 513 292 85 85 chr17 8352406 8352463 -86920188 - B4A SINE B4 -20 272 223 5 648 637 216 166 11 chr17 8352463 8352650 -86920001 - B3 SINE B2 0 216 1 5 648 513 292 85 85 chr17 8352650 8352768 -86919883 - B4A SINE B4 -70 222 97 5 648 22 0 0 0 chr17 8352895 8352917 -86919734 + AT_rich Low_complexity Low_complexity 1 22 0 5 648 21 36 0 0 chr17 8353294 8353322 -86919329 + AT_rich Low_complexity Low_complexity 1 28 0 5 648 253 191 215 43 chr17 8353557 8353650 -86919001 - MER34A1 LTR ERV1 -22 565 457 5 648 761 291 136 13 chr17 8353661 8353971 -86918680 - MER34A1 LTR ERV1 -222 365 18 5 648 247 242 118 21 chr17 8354328 8354421 -86918230 + MLT1A1 LTR MaLR 267 368 -40 5 648 216 226 306 12 chr17 8354483 8354568 -86918083 + MIRm SINE MIR 21 130 -146 5 648 262 277 112 35 chr17 8354630 8354746 -86917905 - MIR SINE MIR -127 135 11 5 648 490 232 101 47 chr17 8355142 8355291 -86917360 - ID_B1 SINE B4 0 224 68 5 648 1312 268 85 34 chr17 8355418 8355890 -86916761 + RLTR20B3 LTR ERVK 26 521 -56 5 648 653 274 75 10 chr17 8355928 8356127 -86916524 - B3 SINE B2 -3 213 2 5 648 840 226 42 0 chr17 8356171 8356339 -86916312 - B3A SINE B2 -23 175 1 5 648 281 228 25 12 chr17 8356478 8356558 -86916093 + MLT2B4 LTR ERVL 401 481 -75 5 648 326 263 151 8 chr17 8356754 8356873 -86915778 - MLT1A LTR MaLR 0 374 239 5 648 24 67 0 0 chr17 8358565 8358610 -86914041 + GC_rich Low_complexity Low_complexity 1 45 0 5 648 481 312 40 48 chr17 8361026 8361278 -86911373 - L1M5 LINE L1 -403 5776 5527 5 648 216 289 40 0 chr17 8361559 8361635 -86911016 + ID4 SINE ID 2 80 -3 5 648 884 160 0 34 chr17 8363172 8363321 -86909330 - B1_Mus1 SINE Alu 0 148 5 5 648 936 216 50 5 chr17 8363662 8363862 -86908789 - B3 SINE B2 -6 210 2 6 648 360 289 37 37 chr17 8363942 8364050 -86908601 - PB1D10 SINE Alu 0 117 10 6 648 203 321 101 0 chr17 8364772 8364881 -86907770 + L4 LINE RTE 286 405 -1624 6 648 654 193 53 0 chr17 8365025 8365139 -86907512 - RSINE1 SINE B4 -44 121 2 6 648 203 182 0 0 chr17 8366279 8366312 -86906339 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 648 1487 62 0 20 chr17 8366414 8366611 -86906040 - B2_Mm2 SINE B2 -1 194 2 6 648 373 290 194 0 chr17 8366717 8366841 -86905810 - MLT1A0 LTR MaLR 0 365 218 6 648 293 267 45 62 chr17 8366884 8366996 -86905655 - MLT1A0 LTR MaLR -232 133 24 6 648 284 250 120 0 chr17 8368560 8368668 -86903983 + PB1 SINE Alu 1 121 -6 6 648 237 278 97 0 chr17 8368685 8368757 -86903894 + ID2 SINE ID 3 81 -2 6 648 1193 109 0 63 chr17 8369475 8369681 -86902970 - B2_Mm2 SINE B2 -2 193 1 6 648 436 211 50 16 chr17 8370223 8370328 -86902323 + PB1D9 SINE Alu 8 111 -9 6 648 440 250 54 7 chr17 8370625 8370774 -86901877 - RSINE1 SINE B4 -6 159 4 6 648 610 226 52 15 chr17 8371122 8371257 -86901394 + B1F SINE Alu 3 142 -7 6 648 236 257 175 9 chr17 8371413 8371527 -86901124 + Charlie11 DNA MER1_type 1750 1882 -314 6 648 431 195 149 25 chr17 8373983 8374104 -86898547 + ID_B1 SINE B4 82 217 -7 6 648 252 0 0 0 chr17 8374991 8375019 -86897632 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 648 195 326 122 29 chr17 8375675 8375921 -86896730 - L2a LINE L2 -220 3206 2938 6 648 212 329 224 12 chr17 8376051 8376395 -86896256 - L2a LINE L2 -728 2691 2275 6 648 247 313 57 43 chr17 8376485 8376625 -86896026 - L2a LINE L2 -1376 2043 1902 6 648 903 201 136 51 chr17 8377408 8377753 -86894898 - MTD LTR MaLR -13 406 1 6 648 207 167 0 0 chr17 8377946 8377988 -86894663 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 648 4140 42 4 23 chr17 8378023 8378539 -86894112 - L1Md_F2 LINE L1 0 6582 6077 6 648 249 299 0 0 chr17 8378686 8378753 -86893898 + Tigger5 DNA MER2_type 2300 2366 -40 6 648 194 274 198 10 chr17 8380238 8380334 -86892317 + MIRb SINE MIR 124 237 -31 6 648 441 242 33 0 chr17 8381265 8381356 -86891295 + PB1D9 SINE Alu 12 105 -15 6 648 262 325 83 8 chr17 8381356 8381386 -86891265 + B4 SINE B4 97 226 -66 6 648 305 244 194 16 chr17 8381387 8381516 -86891135 + L1MA9 LINE L1 6074 6225 -87 6 648 39 66 0 11 chr17 8381709 8381740 -86890911 + AT_rich Low_complexity Low_complexity 1 31 0 6 648 851 202 96 30 chr17 8381740 8381939 -86890712 + B3 SINE B2 2 213 -3 6 648 39 66 0 11 chr17 8381939 8381999 -86890652 + AT_rich Low_complexity Low_complexity 1 60 0 6 648 247 293 27 0 chr17 8383675 8383750 -86888901 - ID4 SINE ID -2 81 5 6 648 714 211 128 26 chr17 8383919 8384114 -86888537 + B3 SINE B2 2 216 0 6 648 28 29 0 0 chr17 8384198 8384233 -86888418 + AT_rich Low_complexity Low_complexity 1 35 0 6 648 259 270 59 117 chr17 8385791 8385910 -86886741 - PB1D10 SINE Alu 0 149 14 6 648 303 202 115 28 chr17 8385977 8386088 -86886563 - PB1D9 SINE Alu 0 150 33 6 648 260 246 18 0 chr17 8386379 8386436 -86886215 + ID2 SINE ID 15 72 -11 6 648 421 281 32 2 chr17 8386513 8386689 -86885962 + L1M2 LINE L1 4088 4267 -1873 6 648 21 0 0 0 chr17 8388123 8388144 -86884507 + AT_rich Low_complexity Low_complexity 1 21 0 6 649 266 274 182 36 chr17 8389692 8389802 -86882849 - RMER15 LTR ERVL -16 559 434 6 649 260 351 62 45 chr17 8389860 8390036 -86882615 - RMER15 LTR ERVL -396 179 1 6 649 756 261 73 25 chr17 8390619 8390823 -86881828 - B3 SINE B2 -1 215 2 6 649 32 26 0 0 chr17 8390927 8390966 -86881685 + AT_rich Low_complexity Low_complexity 1 39 0 6 649 236 278 194 0 chr17 8393320 8393392 -86879259 - B1F SINE Alu -44 105 20 6 649 309 51 0 0 chr17 8393392 8393431 -86879220 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 649 1190 62 0 0 chr17 8393431 8393575 -86879076 - B1_Mm SINE Alu -3 144 1 6 649 424 302 77 67 chr17 8393617 8393812 -86878839 - L1M4 LINE L1 -3788 2358 2162 6 649 404 313 128 28 chr17 8394865 8395115 -86877536 - B4 SINE B4 -17 275 1 6 649 354 245 76 29 chr17 8395234 8395339 -86877312 - RSINE1 SINE B4 -53 112 3 6 649 300 276 16 24 chr17 8395437 8395563 -86877088 - Lx7 LINE L1 -10 7686 7562 6 649 23 0 0 0 chr17 8395563 8395586 -86877065 + AT_rich Low_complexity Low_complexity 1 23 0 6 649 4396 190 44 14 chr17 8395705 8396630 -86876021 - Lx7 LINE L1 -422 7274 6322 6 649 378 0 0 0 chr17 8396639 8396681 -86875970 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 649 3436 183 89 15 chr17 8396686 8397684 -86874967 - Lx7 LINE L1 -1641 6055 4987 6 649 236 218 46 57 chr17 8398196 8398371 -86874280 + (CAGG)n Simple_repeat Simple_repeat 4 176 0 6 649 251 327 64 18 chr17 8398861 8398970 -86873681 + BC1_Mm scRNA scRNA 4 117 -35 6 649 778 302 12 53 chr17 8399081 8399326 -86873325 + B4A SINE B4 1 235 -57 6 649 304 286 28 19 chr17 8399347 8399454 -86873197 + RSINE1 SINE B4 58 165 0 6 649 387 0 0 0 chr17 8399535 8399578 -86873073 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 649 1205 50 0 0 chr17 8400004 8400143 -86872508 + B1_Mus1 SINE Alu 1 139 -9 6 649 195 42 0 0 chr17 8400143 8400167 -86872484 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6 649 272 253 12 25 chr17 8400169 8400250 -86872401 + MTEb LTR MaLR 300 379 0 6 649 186 43 0 0 chr17 8400566 8400589 -86872062 + (A)n Simple_repeat Simple_repeat 1 23 0 6 649 389 287 74 44 chr17 8400884 8401019 -86871632 + B1F SINE Alu 2 140 -9 6 649 915 140 0 27 chr17 8401052 8401235 -86871416 + G-rich Low_complexity Low_complexity 3 180 0 6 649 659 44 102 42 chr17 8401235 8401402 -86871249 + GA-rich Low_complexity Low_complexity 3 179 0 6 649 360 148 0 0 chr17 8401396 8401457 -86871194 + (GA)n Simple_repeat Simple_repeat 1 61 0 6 649 387 0 0 0 chr17 8401457 8401500 -86871151 + (GGAA)n Simple_repeat Simple_repeat 2 44 0 6 649 387 273 208 45 chr17 8401706 8401971 -86870680 + L1MD LINE L1 3656 3963 -2183 6 649 416 211 162 9 chr17 8401989 8402017 -86870634 + B3A SINE B2 40 83 -115 6 649 231 114 0 0 chr17 8402017 8402052 -86870599 + (CACGT)n Simple_repeat Simple_repeat 1 35 0 6 649 416 211 162 9 chr17 8402052 8402128 -86870523 + B3A SINE B2 84 160 -38 6 649 207 0 0 0 chr17 8402128 8402151 -86870500 + (TC)n Simple_repeat Simple_repeat 2 24 0 6 649 819 80 0 0 chr17 8402151 8402263 -86870388 + (CA)n Simple_repeat Simple_repeat 2 113 0 6 649 711 211 25 32 chr17 8402289 8402446 -86870205 + MTEa LTR MaLR 223 378 -1 6 649 434 349 40 73 chr17 8402609 8402909 -86869742 - MER21B LTR ERV1 -301 562 273 6 649 753 70 0 0 chr17 8405910 8406010 -86866641 + (CTTTG)n Simple_repeat Simple_repeat 5 104 0 6 649 796 182 88 0 chr17 8406011 8406148 -86866503 - B1_Mur4 SINE Alu -1 149 1 6 649 1202 280 21 75 chr17 8406380 8406755 -86865896 + MTEa LTR MaLR 22 376 -3 6 649 248 323 31 20 chr17 8407172 8407270 -86865381 - L2b LINE L2 0 3375 3277 6 649 194 239 168 35 chr17 8407716 8407829 -86864822 - L2 LINE L2 -744 2675 2548 6 649 1091 136 131 0 chr17 8407831 8408030 -86864621 + URR1B DNA MER1_type 1 225 0 6 649 2743 11 0 245 chr17 8408715 8409201 -86863450 + IAPLTR1_Mm LTR ERVK 1 367 0 6 649 53173 25 18 15 chr17 8409201 8415656 -86856995 + IAPEz-int LTR ERVK 8 6481 0 6 649 2743 11 0 245 chr17 8415656 8416142 -86856509 + IAPLTR1_Mm LTR ERVK 1 367 0 6 649 296 333 51 8 chr17 8416656 8416774 -86855877 + MER63B DNA AcHobo 300 422 -14 6 649 2887 78 22 22 chr17 8417665 8418072 -86854579 - MTB_Mm LTR MaLR 0 407 1 6 649 189 0 0 0 chr17 8418348 8418369 -86854282 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 6 649 294 263 0 0 chr17 8418385 8418442 -86854209 - ID SINE ID -139 85 29 6 649 203 167 0 0 chr17 8418676 8418718 -86853933 + A-rich Low_complexity Low_complexity 1 42 0 6 649 649 209 184 121 chr17 8419374 8419646 -86853005 - B4A SINE B4 -2 290 2 6 649 194 57 57 0 chr17 8420099 8420134 -86852517 + (TTTTTG)n Simple_repeat Simple_repeat 1 37 0 6 649 797 193 7 7 chr17 8420165 8420311 -86852340 + ID_B1 SINE B4 78 223 -1 6 649 482 184 18 0 chr17 8420321 8420430 -86852221 + GA-rich Low_complexity Low_complexity 5 115 0 6 649 1230 100 0 0 chr17 8420430 8420610 -86852041 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 6 649 1421 209 88 75 chr17 8420938 8421337 -86851314 - RLTR18B LTR ERVK -108 404 1 6 649 1109 163 118 29 chr17 8422402 8422762 -86849889 - RMER6B LTR ERVK 0 461 6 6 649 4991 90 83 10 chr17 8424135 8424821 -86847830 + RMER19A LTR ERVK 2 737 0 6 649 530 313 54 34 chr17 8425315 8425520 -86847131 + MLT1A0 LTR MaLR 1 209 -156 6 649 1202 182 0 27 chr17 8425520 8425740 -86846911 - B3 SINE B2 0 216 3 6 649 355 358 43 28 chr17 8425791 8425932 -86846719 - RSINE1 SINE B4 -13 152 10 6 649 500 185 0 24 chr17 8427990 8428156 -86844495 + CT-rich Low_complexity Low_complexity 2 163 0 6 649 325 115 22 33 chr17 8428200 8428290 -86844361 + CT-rich Low_complexity Low_complexity 2 90 0 6 649 442 227 121 57 chr17 8429540 8429680 -86842971 - B1F2 SINE Alu 0 149 1 6 649 798 253 56 0 chr17 8429680 8429733 -86842918 - ID_B1 SINE B4 -133 91 29 6 649 849 189 0 0 chr17 8429740 8429909 -86842742 + CT-rich Low_complexity Low_complexity 2 170 0 6 649 285 29 0 0 chr17 8429913 8429947 -86842704 + (TTTC)n Simple_repeat Simple_repeat 3 36 0 6 649 372 160 0 0 chr17 8429979 8430079 -86842572 + CT-rich Low_complexity Low_complexity 4 103 0 6 649 377 152 0 33 chr17 8430082 8430143 -86842508 - B1_Mur4 SINE Alu -90 60 2 6 649 401 312 108 33 chr17 8431002 8431214 -86841437 + Tigger15a DNA TcMar 31 258 -457 6 649 468 192 125 0 chr17 8431666 8431770 -86840881 + PB1D9 SINE Alu 4 120 0 7 649 238 250 16 16 chr17 8431771 8431832 -86840819 + GA-rich Low_complexity Low_complexity 4 64 0 7 649 703 271 44 0 chr17 8431855 8432036 -86840615 + ID_B1 SINE B4 36 224 0 7 649 479 17 17 0 chr17 8434855 8434915 -86837736 + (TC)n Simple_repeat Simple_repeat 2 62 0 7 649 627 179 171 0 chr17 8435802 8435919 -86836732 + B1_Mur2 SINE Alu 1 137 -12 7 649 299 304 60 17 chr17 8436413 8436530 -86836121 - MER92A LTR ERV1 -222 190 69 7 649 894 246 14 29 chr17 8436789 8436998 -86835653 + B3 SINE B2 1 206 -10 7 649 266 48 71 0 chr17 8437760 8437802 -86834849 + (ATGGTG)n Simple_repeat Simple_repeat 2 46 0 7 649 766 113 40 5 chr17 8438350 8438572 -86834079 + (TG)n Simple_repeat Simple_repeat 1 229 0 7 649 338 301 0 0 chr17 8438575 8438648 -86834003 - ID4_ SINE ID -6 77 5 7 649 343 143 314 51 chr17 8438654 8438772 -86833879 - B1F SINE Alu 0 149 1 7 649 537 326 32 53 chr17 8438890 8439078 -86833573 - B3A SINE B2 -10 188 5 7 649 189 0 0 0 chr17 8439461 8439482 -86833169 + (CAGAG)n Simple_repeat Simple_repeat 5 25 0 7 649 306 0 0 0 chr17 8439805 8439839 -86832812 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 649 257 316 29 110 chr17 8439919 8440200 -86832451 - RMER12 LTR ERVK -364 958 701 7 649 435 112 18 36 chr17 8440674 8440785 -86831866 + GA-rich Low_complexity Low_complexity 1 109 0 7 649 3177 92 30 8 chr17 8440884 8441388 -86831263 + MusHAL1 LINE L1 1571 2085 -627 7 649 22 80 0 0 chr17 8441533 8441583 -86831068 + AT_rich Low_complexity Low_complexity 1 50 0 7 649 26 30 0 0 chr17 8441958 8441991 -86830660 + AT_rich Low_complexity Low_complexity 1 33 0 7 649 347 0 0 23 chr17 8444139 8444183 -86828468 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 7 649 957 101 43 14 chr17 8444183 8444324 -86828327 - B1_Mus1 SINE Alu -2 146 2 7 649 1212 54 0 13 chr17 8445283 8445433 -86827218 - B1_Mus1 SINE Alu 0 148 1 7 649 387 359 85 40 chr17 8446067 8446465 -86826186 - L1M4 LINE L1 -428 5751 5336 7 649 992 152 197 0 chr17 8446639 8446817 -86825834 - B3 SINE B2 -3 213 1 7 649 432 300 77 36 chr17 8446858 8447221 -86825430 - L1M4 LINE L1 -1075 5071 4694 7 649 322 320 70 45 chr17 8447430 8447587 -86825064 - HAL1-3A_ME LINE L1 -416 2442 2282 7 649 680 174 0 14 chr17 8447634 8447780 -86824871 + CT-rich Low_complexity Low_complexity 2 145 0 7 649 538 219 26 0 chr17 8447826 8447940 -86824711 - PB1D10 SINE Alu 0 117 1 7 649 783 211 29 69 chr17 8448037 8448210 -86824441 - B3 SINE B2 -48 168 3 7 649 239 296 0 80 chr17 8450769 8450857 -86821794 - ID4 SINE ID 0 83 3 7 649 386 310 78 0 chr17 8450867 8450983 -86821668 - PB1 SINE Alu -2 125 1 7 649 230 284 118 87 chr17 8450983 8451027 -86821624 - MT2B2 LTR ERVL -428 156 109 7 649 411 83 0 0 chr17 8451258 8451318 -86821333 + (TG)n Simple_repeat Simple_repeat 2 61 0 7 649 227 79 26 0 chr17 8451414 8451452 -86821199 + (TGGGGG)n Simple_repeat Simple_repeat 3 41 0 7 649 296 320 74 0 chr17 8451474 8451596 -86821055 - B4 SINE B4 -68 224 94 7 649 201 39 0 0 chr17 8451614 8451640 -86821011 + (TTTTTG)n Simple_repeat Simple_repeat 5 30 0 7 649 933 128 0 0 chr17 8451833 8451981 -86820670 + (GAAA)n Simple_repeat Simple_repeat 3 150 0 7 649 523 287 179 59 chr17 8452013 8452320 -86820331 - MTE2a LTR MaLR -1 378 35 7 649 417 86 0 0 chr17 8452907 8452965 -86819686 + (GA)n Simple_repeat Simple_repeat 1 58 0 7 649 3036 50 42 3 chr17 8453049 8453430 -86819221 - MTB LTR MaLR 0 396 1 7 649 530 101 34 0 chr17 8453430 8453519 -86819132 - MTB-int LTR MaLR 0 1098 1007 7 649 497 202 113 30 chr17 8454202 8454335 -86818316 - L2c LINE L2 -30 3357 3214 7 649 220 243 0 146 chr17 8454938 8455020 -86817631 - L2c LINE L2 -2 3385 3316 7 649 6781 69 28 77 chr17 8455101 8456173 -86816478 - MTB-int LTR MaLR -79 1019 1 7 649 3039 55 5 66 chr17 8456173 8456599 -86816052 - MTB LTR MaLR 0 400 1 7 649 888 120 28 0 chr17 8456725 8456867 -86815784 - B2_Mm2 SINE B2 -2 193 48 7 649 557 158 0 17 chr17 8457342 8457458 -86815193 + CT-rich Low_complexity Low_complexity 4 117 0 7 649 3855 69 0 12 chr17 8457762 8458261 -86814390 + L1Md_F2 LINE L1 6078 6570 -12 7 649 834 137 83 0 chr17 8458267 8458435 -86814216 + Lx2A1 LINE L1 6823 7004 -4 7 649 793 150 38 0 chr17 8458460 8458593 -86814058 - RMER19C LTR ERVK -253 358 221 7 649 911 189 194 0 chr17 8458597 8458777 -86813874 + B3 SINE B2 2 216 0 7 649 312 223 110 60 chr17 8459154 8459254 -86813397 - PB1D10 SINE Alu 0 117 13 7 649 374 299 99 54 chr17 8459340 8459563 -86813088 - B4A SINE B4 -53 239 7 7 649 797 226 25 18 chr17 8459986 8460177 -86812474 - B3 SINE B2 0 195 1 7 649 270 0 0 0 chr17 8460307 8460337 -86812314 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 7 649 225 294 96 19 chr17 8460704 8460808 -86811843 - MER3 DNA MER1_type -6 203 92 7 649 322 240 139 37 chr17 8461734 8461842 -86810809 + MLT1B LTR MaLR 20 138 -252 7 649 461 224 0 1 chr17 8461842 8461926 -86810725 + RMER17C LTR ERVK 3 83 -327 7 649 423 0 0 0 chr17 8461926 8461973 -86810678 + (TC)n Simple_repeat Simple_repeat 2 48 0 7 649 361 275 0 36 chr17 8461973 8461984 -86810667 + RMER17C LTR ERVK 302 311 -647 7 649 261 184 398 0 chr17 8461974 8462077 -86810574 - B2_Mm2 SINE B2 -4 191 48 7 649 1141 117 11 11 chr17 8462162 8462343 -86810308 - B2_Mm2 SINE B2 -14 181 1 7 649 766 174 44 97 chr17 8462343 8462583 -86810068 + RMER17C LTR ERVK 182 410 0 7 649 189 178 0 0 chr17 8462684 8462729 -86809922 + (TAA)n Simple_repeat Simple_repeat 1 45 0 7 649 1262 34 0 0 chr17 8462736 8462882 -86809769 + B1_Mm SINE Alu 2 147 0 7 649 296 390 50 12 chr17 8462960 8463121 -86809530 + B4A SINE B4 126 292 0 7 649 21 0 0 0 chr17 8463154 8463175 -86809476 + AT_rich Low_complexity Low_complexity 1 21 0 7 649 228 277 111 43 chr17 8463178 8463295 -86809356 + MLT1B LTR MaLR 155 279 -111 7 649 364 299 134 63 chr17 8463302 8463640 -86809011 + MTEa LTR MaLR 6 377 -2 7 649 293 257 151 50 chr17 8463640 8463745 -86808906 + MLT1B LTR MaLR 274 390 0 7 649 728 190 80 0 chr17 8463924 8464061 -86808590 + B1_Mur4 SINE Alu 2 149 -1 7 649 242 220 56 74 chr17 8466406 8466514 -86806137 + ID_B1 SINE B4 84 193 -99 7 649 7319 107 18 16 chr17 8466899 8468587 -86804064 - Lx LINE L1 -1 6653 4956 7 649 271 306 91 29 chr17 8468589 8468746 -86803905 - L1M3 LINE L1 -795 5348 5187 7 649 216 307 60 58 chr17 8469396 8469526 -86803125 - MIRb SINE MIR -32 236 101 7 649 371 216 90 52 chr17 8469814 8469985 -86802666 - RLTR13D3 LTR ERVK 0 1114 983 7 649 1170 74 0 0 chr17 8469985 8470133 -86802518 + B1_Mus1 SINE Alu 1 148 0 7 649 344 288 76 43 chr17 8470133 8470146 -86802505 - RLTR13D3 LTR ERVK -178 724 712 7 649 279 202 190 0 chr17 8470841 8470920 -86801731 - RLTR13D3 LTR ERVK -1020 94 1 7 649 462 234 74 9 chr17 8471439 8471547 -86801104 - B1_Mur1 SINE Alu -7 142 28 7 649 304 269 10 77 chr17 8471588 8471692 -86800959 + L1MA5 LINE L1 6149 6244 -56 7 649 258 303 30 0 chr17 8471702 8471768 -86800883 + tRNA-Ala-GCY_ tRNA tRNA 2 69 -6 7 649 744 243 86 5 chr17 8471925 8472111 -86800540 + ID_B1 SINE B4 17 217 -7 7 649 393 202 110 24 chr17 8472471 8472598 -86800053 - RMER15 LTR ERVL -17 558 421 7 649 2234 143 55 5 chr17 8472885 8472994 -86799657 - MTC LTR MaLR -22 399 285 7 649 2714 146 79 10 chr17 8472994 8473485 -86799166 + RLTR11A2 LTR ERVK 1 525 -2 7 649 2234 143 55 5 chr17 8473485 8473755 -86798896 - MTC LTR MaLR -137 284 2 7 649 1447 244 54 23 chr17 8473755 8474183 -86798468 - RMER15-int LTR ERVL -340 4659 4219 7 649 265 330 97 0 chr17 8474243 8474346 -86798305 - RMER15-int LTR ERVL -2444 2555 2443 7 649 665 168 94 16 chr17 8474454 8474581 -86798070 - B1_Mur2 SINE Alu -10 139 3 7 649 236 118 0 0 chr17 8474616 8474650 -86798001 + B1_Mur1 SINE Alu 95 128 -21 7 649 503 219 37 19 chr17 8474848 8474955 -86797696 - B1_Mur1 SINE Alu -40 109 1 7 649 284 335 89 17 chr17 8474955 8475027 -86797624 - B4 SINE B4 -94 198 7 7 649 249 272 141 0 chr17 8474971 8475063 -86797588 - PB1D10 SINE Alu -6 111 7 7 649 206 148 19 0 chr17 8475305 8475359 -86797292 + T-rich Low_complexity Low_complexity 2 56 0 7 649 543 176 61 81 chr17 8475396 8475544 -86797107 - B1_Mus1 SINE Alu 0 148 4 7 649 243 286 105 18 chr17 8475563 8475677 -86796974 - LTR48 LTR ERV1 -11 776 653 7 649 221 243 0 75 chr17 8475744 8475824 -86796827 - ID_B1 SINE B4 -126 98 25 7 649 234 125 0 0 chr17 8477585 8477633 -86795018 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 7 649 462 157 45 0 chr17 8477937 8478026 -86794625 + B1_Mur4 SINE Alu 1 93 -57 7 649 439 286 98 12 chr17 8478374 8478537 -86794114 - B3 SINE B2 -27 189 13 7 649 924 88 0 55 chr17 8478566 8478711 -86793940 - B1_Mus1 SINE Alu -11 137 1 7 649 1047 107 24 14 chr17 8478723 8478893 -86793758 - B2_Mm2 SINE B2 -1 215 39 7 649 495 176 77 19 chr17 8478907 8479011 -86793640 - B1_Mur4 SINE Alu 0 150 41 7 649 362 161 0 0 chr17 8479056 8479112 -86793539 - B1_Mus2 SINE Alu -89 58 3 7 649 1217 48 0 7 chr17 8479146 8479293 -86793358 + B1_Mus2 SINE Alu 2 147 0 7 649 497 252 114 0 chr17 8479871 8479994 -86792657 - B1_Mur1 SINE Alu -11 138 2 7 649 622 276 125 119 chr17 8480248 8480521 -86792130 + L1MC1 LINE L1 4083 4371 -1775 7 649 357 214 2 9 chr17 8480521 8480594 -86792057 - ID4_ SINE ID -12 71 2 7 649 622 276 125 119 chr17 8480594 8481082 -86791569 + L1MC1 LINE L1 4372 4891 -1255 7 649 1638 36 0 15 chr17 8481082 8481277 -86791374 + B2_Mm1a SINE B2 1 192 -1 7 649 622 276 125 119 chr17 8481277 8481546 -86791105 + L1MC1 LINE L1 4823 5160 -986 7 649 347 170 208 21 chr17 8481546 8481642 -86791009 + PB1D7 SINE Alu 1 114 -6 7 649 611 276 125 119 chr17 8481642 8481794 -86790857 + L1MC1 LINE L1 5161 5346 -800 7 649 1384 226 54 61 chr17 8481868 8482292 -86790359 + MTC LTR MaLR 1 421 0 8 649 482 224 0 101 chr17 8482347 8482447 -86790204 + B1_Mur1 SINE Alu 36 127 -22 8 649 1841 150 48 6 chr17 8482447 8482763 -86789888 - ORR1A4 LTR MaLR 0 329 1 8 649 482 224 0 101 chr17 8482763 8482781 -86789870 + B1_Mur1 SINE Alu 128 142 -7 8 649 637 286 56 91 chr17 8482764 8482995 -86789656 + B4 SINE B4 70 292 0 8 649 1209 75 121 6 chr17 8483452 8483625 -86789026 + B2_Mm2 SINE B2 2 194 -1 8 649 1227 207 89 0 chr17 8483713 8483984 -86788667 + MTD LTR MaLR 123 417 -2 8 649 448 221 110 0 chr17 8483986 8484125 -86788526 + L1MC1 LINE L1 5913 6078 -1917 7 649 1243 42 0 0 chr17 8484457 8484601 -86788050 + B1_Mus2 SINE Alu 1 144 -3 8 649 452 251 268 30 chr17 8484683 8484851 -86787800 - B3 SINE B2 -7 209 2 8 649 802 226 33 28 chr17 8484869 8485083 -86787568 - B3 SINE B2 0 216 2 8 649 21 0 0 0 chr17 8485096 8485117 -86787534 + AT_rich Low_complexity Low_complexity 1 21 0 8 649 884 169 13 7 chr17 8485117 8485266 -86787385 + B1_Mur4 SINE Alu 1 150 0 8 649 356 296 66 0 chr17 8485505 8485657 -86786994 + MER33 DNA MER1_type 46 207 -117 8 649 387 319 33 23 chr17 8485696 8485829 -86786822 - ID_B1 SINE B4 -19 205 75 8 649 612 259 20 0 chr17 8485977 8486124 -86786527 - RSINE1 SINE B4 -4 161 12 8 649 671 185 85 53 chr17 8486772 8486960 -86785691 + B2_Mm2 SINE B2 2 195 0 8 649 242 236 266 26 chr17 8487089 8487202 -86785449 - B1_Mur1 SINE Alu -9 140 1 8 649 240 288 172 23 chr17 8487202 8487217 -86785434 - B4 SINE B4 -75 217 71 8 649 21 0 0 0 chr17 8488064 8488085 -86784566 + AT_rich Low_complexity Low_complexity 1 21 0 8 649 615 254 26 78 chr17 8488184 8488376 -86784275 + B3A SINE B2 2 183 -15 8 649 702 176 96 0 chr17 8488410 8488546 -86784105 + B1_Mur1 SINE Alu 1 149 0 8 649 866 132 7 14 chr17 8488562 8488700 -86783951 + B1_Mus1 SINE Alu 11 147 -1 8 649 945 149 30 69 chr17 8488780 8488982 -86783669 + B2_Mm2 SINE B2 2 195 0 8 649 319 297 65 33 chr17 8491310 8491463 -86781188 + RSINE1 SINE B4 5 162 -3 8 649 216 0 0 0 chr17 8491769 8491793 -86780858 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 8 649 2088 210 31 20 chr17 8491798 8492249 -86780402 - RLTR16 LTR ERVK -49 456 1 8 649 338 118 112 8 chr17 8493330 8493420 -86779231 + URR1B DNA MER1_type 1 120 -105 8 649 243 249 29 25 chr17 8493796 8493871 -86778780 - ID4_ SINE ID -69 83 18 8 649 234 0 0 0 chr17 8494527 8494553 -86778098 + (A)n Simple_repeat Simple_repeat 1 26 0 8 649 4507 81 27 3 chr17 8494826 8495424 -86777227 - L1Md_F2 LINE L1 -14 6568 5957 8 649 1236 41 0 20 chr17 8495426 8495576 -86777075 - B1_Mus1 SINE Alu 0 148 2 8 649 229 291 106 56 chr17 8495611 8495771 -86776880 - B4A SINE B4 0 292 125 8 649 546 196 0 22 chr17 8495971 8496107 -86776544 - RMER17C LTR ERVK -133 277 145 8 649 195 42 0 0 chr17 8496114 8496138 -86776513 + (T)n Simple_repeat Simple_repeat 1 24 0 8 649 889 226 86 37 chr17 8496540 8496783 -86775868 + RMER4B LTR ERVK 69 323 -262 8 649 1125 308 86 59 chr17 8496804 8497501 -86775150 + RMER13A LTR ERVK 14 729 -131 8 649 518 239 27 28 chr17 8497537 8497751 -86774900 + RMER4B LTR ERVK 330 576 -9 8 649 867 253 0 29 chr17 8497774 8497949 -86774702 - ID_B1 SINE B4 -31 193 24 8 649 540 0 0 0 chr17 8499163 8499223 -86773428 + (TC)n Simple_repeat Simple_repeat 2 61 0 8 649 1339 101 21 0 chr17 8499237 8499426 -86773225 - B2_Mm1t SINE B2 0 193 1 8 649 1209 48 0 0 chr17 8499428 8499573 -86773078 - B1_Mus2 SINE Alu -1 146 2 8 649 1022 78 5 38 chr17 8499594 8499780 -86772871 + (TTC)n Simple_repeat Simple_repeat 1 180 0 8 649 570 146 0 0 chr17 8499780 8499876 -86772775 + (TCC)n Simple_repeat Simple_repeat 2 97 0 8 649 314 297 129 54 chr17 8500048 8500285 -86772366 - L1MC2 LINE L1 -10 6334 6081 1 649 1812 148 107 21 chr17 8500285 8500623 -86772028 - ORR1B2 LTR MaLR 0 367 1 2 649 314 248 131 52 chr17 8500623 8500701 -86771950 - L1MC2 LINE L1 -264 6080 5981 1 649 671 65 0 11 chr17 8500820 8500914 -86771737 + (TTCC)n Simple_repeat Simple_repeat 3 95 0 3 649 591 252 32 0 chr17 8500927 8501050 -86771601 - B1_Mur1 SINE Alu -22 127 1 4 649 423 333 41 7 chr17 8501050 8501078 -86771573 - ID SINE ID -142 82 50 5 649 485 295 53 20 chr17 8501363 8501515 -86771136 + MER82 DNA MER2_type 6 162 -491 6 649 690 140 48 75 chr17 8501946 8502093 -86770558 - B1_Mur2 SINE Alu -1 148 6 7 649 405 264 62 100 chr17 8501955 8502115 -86770536 - B4 SINE B4 -73 219 66 8 649 181 372 81 0 chr17 8502134 8502220 -86770431 - MIR SINE MIR -164 98 6 9 649 958 90 15 0 chr17 8502338 8502471 -86770180 - B1_Mur4 SINE Alu -7 143 9 1 649 458 272 37 93 chr17 8502471 8502500 -86770151 - B4 SINE B4 -73 219 67 1 649 34 42 0 0 chr17 8502516 8502564 -86770087 + AT_rich Low_complexity Low_complexity 1 48 0 1 649 826 160 52 23 chr17 8502566 8502739 -86769912 - B2_Mm2 SINE B2 -16 179 2 1 649 948 219 41 68 chr17 8502871 8503091 -86769560 + B3 SINE B2 1 214 -2 1 649 1528 37 0 36 chr17 8504370 8504565 -86768086 + B2_Mm2 SINE B2 1 188 -7 1 649 473 213 10 31 chr17 8504951 8505048 -86767603 - PB1D9 SINE Alu 0 120 26 1 649 269 269 143 9 chr17 8505174 8505279 -86767372 - MER3 DNA MER1_type -17 192 74 1 649 196 314 48 63 chr17 8505665 8505791 -86766860 - L2 LINE L2 -432 2987 2864 1 649 393 286 42 8 chr17 8505797 8505917 -86766734 - MTEb LTR MaLR 0 379 256 1 649 415 366 146 4 chr17 8507093 8507340 -86765311 - MLT1A0 LTR MaLR -39 326 45 2 649 2271 102 13 0 chr17 8507534 8507849 -86764802 + ORR1A2 LTR MaLR 1 319 -8 2 649 371 361 51 34 chr17 8507864 8508039 -86764612 + MER21B LTR ERV1 39 216 -647 2 649 244 267 133 0 chr17 8508189 8508249 -86764402 + MLT1A0 LTR MaLR 1 68 -297 2 649 225 295 33 0 chr17 8508299 8508360 -86764291 + MLT1A0 LTR MaLR 275 337 -71 2 649 204 40 0 0 chr17 8508378 8508403 -86764248 + (TGG)n Simple_repeat Simple_repeat 2 26 0 2 649 670 187 82 0 chr17 8508432 8508566 -86764085 - B1_Mur1 SINE Alu -1 148 4 2 649 186 71 0 0 chr17 8508689 8508717 -86763934 + (T)n Simple_repeat Simple_repeat 1 28 0 2 649 1880 185 33 17 chr17 8508864 8509226 -86763425 - ORR1D1 LTR MaLR 0 374 7 2 649 766 224 113 15 chr17 8509492 8509687 -86762964 - B3 SINE B2 -2 214 1 2 649 256 371 36 73 chr17 8510822 8510868 -86761783 - MT2B2 LTR ERVL -245 339 188 2 649 581 306 0 29 chr17 8510868 8511006 -86761645 - ID_B1 SINE B4 -9 215 82 3 649 959 145 14 0 chr17 8511491 8511636 -86761015 + B1_Mur3 SINE Alu 2 148 -1 3 649 356 291 18 0 chr17 8513041 8513151 -86759500 + PB1D10 SINE Alu 4 115 -2 3 649 471 200 12 0 chr17 8513168 8513253 -86759398 + PB1D10 SINE Alu 30 115 -2 3 649 246 32 0 0 chr17 8513608 8513639 -86759012 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 649 301 293 9 75 chr17 8515056 8515163 -86757488 + MT2B LTR ERVL 161 260 -341 3 649 530 209 38 9 chr17 8515068 8515174 -86757477 + B1_Mur1 SINE Alu 9 117 -32 3 649 605 203 171 8 chr17 8515177 8515306 -86757345 - RSINE1 SINE B4 -8 157 8 3 649 730 179 90 0 chr17 8515539 8515673 -86756978 + B1_Mur4 SINE Alu 3 148 -2 3 649 501 257 35 0 chr17 8515694 8515807 -86756844 + PB1D10 SINE Alu 1 117 0 3 649 245 317 36 12 chr17 8517114 8517197 -86755454 - MER5A DNA MER1_type -104 85 1 4 649 404 217 0 0 chr17 8517414 8517483 -86755168 + B1_Mur1 SINE Alu 61 129 -20 4 649 207 0 0 0 chr17 8518377 8518400 -86754251 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 649 831 257 147 18 chr17 8518667 8518952 -86753699 - MTD LTR MaLR -59 360 39 4 649 348 236 9 88 chr17 8518974 8519018 -86753633 - L1MA4 LINE L1 -478 5834 5791 4 649 349 265 247 0 chr17 8519018 8519184 -86753467 + B3 SINE B2 1 207 -9 4 649 348 238 11 87 chr17 8519184 8519292 -86753359 - L1MA4 LINE L1 -522 5790 5689 4 649 1425 35 81 0 chr17 8519341 8519500 -86753151 + B2_Mm1a SINE B2 2 160 -33 4 649 243 0 0 0 chr17 8519500 8519527 -86753124 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 4 649 1425 35 81 0 chr17 8519527 8519540 -86753111 + B2_Mm1a SINE B2 161 186 -7 4 650 1601 42 5 10 chr17 8521064 8521257 -86751394 + B2_Mm1a SINE B2 2 193 0 4 650 1201 61 7 0 chr17 8521272 8521419 -86751232 + B1_Mus1 SINE Alu 1 148 0 4 650 714 230 41 29 chr17 8521419 8521589 -86751062 + B3 SINE B2 29 200 -16 5 650 4489 14 2 0 chr17 8524109 8524601 -86748050 + MT2_Mm LTR ERVL 1 493 0 5 650 39431 16 14 0 chr17 8524601 8529887 -86742764 + MERVL-int LTR ERVL 1 5360 -125 5 650 399 167 46 35 chr17 8529887 8529974 -86742677 + ORR1A3-int LTR MaLR 553 640 -1323 5 650 305 0 0 0 chr17 8529974 8530012 -86742639 + MERVL-int LTR ERVL 5448 5485 0 5 650 4489 14 2 0 chr17 8530012 8530504 -86742147 + MT2_Mm LTR ERVL 1 493 0 5 650 777 263 158 9 chr17 8530658 8530980 -86741671 - ORR1D2 LTR MaLR 0 370 1 5 650 253 305 87 52 chr17 8531198 8531371 -86741280 - B3 SINE B2 -27 189 11 5 650 730 270 0 26 chr17 8531217 8531373 -86741278 - RSINE1 SINE B4 -4 161 10 5 650 208 133 0 62 chr17 8531566 8531614 -86741037 + GA-rich Low_complexity Low_complexity 4 48 0 5 650 207 100 0 0 chr17 8533919 8533949 -86738702 + (CCG)n Simple_repeat Simple_repeat 2 31 0 5 650 252 292 79 61 chr17 8535417 8535581 -86737070 - RMER12 LTR ERVK -420 902 736 5 650 251 71 24 0 chr17 8536230 8536272 -86736379 + (TC)n Simple_repeat Simple_repeat 1 43 0 5 650 24 0 0 0 chr17 8536945 8536969 -86735682 + AT_rich Low_complexity Low_complexity 1 24 0 6 650 960 295 67 87 chr17 8538053 8538398 -86734253 - MTEa LTR MaLR -3 376 39 6 650 338 274 28 64 chr17 8538407 8538516 -86734135 - MTE-int LTR MaLR 0 1580 1476 6 650 2777 216 59 218 chr17 8538585 8538770 -86733881 + RMER19B LTR ERVK 1 240 -662 6 650 234 0 0 0 chr17 8538770 8538796 -86733855 + (CACCC)n Simple_repeat Simple_repeat 1 26 0 6 650 2777 152 153 19 chr17 8538796 8539340 -86733311 + RMER19B LTR ERVK 241 861 -41 6 650 972 291 62 34 chr17 8539358 8539730 -86732921 - MTE-int LTR MaLR -117 1463 877 6 650 397 340 0 0 chr17 8539819 8540484 -86732167 + (GGCTG)n Simple_repeat Simple_repeat 1 665 0 6 650 2135 276 219 40 chr17 8540494 8541022 -86731629 - MTE-int LTR MaLR -401 1179 596 6 650 1218 181 19 5 chr17 8541022 8541228 -86731423 - B3 SINE B2 -6 210 2 6 650 2135 276 219 40 chr17 8541228 8541439 -86731212 - MTE-int LTR MaLR -985 595 354 6 650 180 0 0 0 chr17 8541439 8541459 -86731192 + (C)n Simple_repeat Simple_repeat 1 20 0 6 650 2135 276 219 40 chr17 8541459 8541471 -86731180 - MTE-int LTR MaLR -1227 353 353 6 650 524 161 208 17 chr17 8541471 8541591 -86731060 - B1_Mus1 SINE Alu -1 147 5 7 650 2135 276 219 40 chr17 8541591 8541801 -86730850 - MTE-int LTR MaLR -1227 353 45 6 650 879 260 86 79 chr17 8541833 8542125 -86730526 - MTEa LTR MaLR -4 375 82 7 650 494 231 38 1 chr17 8542467 8542572 -86730079 + PB1D9 SINE Alu 10 113 -36 7 650 398 285 77 24 chr17 8542607 8542776 -86729875 - L1M5 LINE L1 -2844 3302 3125 7 650 807 156 22 7 chr17 8542787 8543068 -86729583 + (TG)n Simple_repeat Simple_repeat 1 285 0 7 650 2473 115 46 1 chr17 8544802 8545172 -86727479 + MTC LTR MaLR 1 377 -44 7 650 2390 137 42 10 chr17 8545184 8545590 -86727061 + MTC-int LTR MaLR 2 420 -838 7 650 525 181 168 30 chr17 8545640 8545771 -86726880 - B1_Mur3 SINE Alu 0 149 1 7 650 762 218 79 14 chr17 8545781 8545995 -86726656 + MTC-int LTR MaLR 1031 1258 0 7 650 2428 147 67 5 chr17 8545995 8546384 -86726267 + MTC LTR MaLR 1 413 -8 7 650 604 306 50 5 chr17 8546406 8546606 -86726045 + ID_B1 SINE B4 15 223 -1 7 650 566 188 59 19 chr17 8546616 8546735 -86725916 + B1_Mur4 SINE Alu 1 121 -26 7 650 288 0 0 0 chr17 8546735 8546767 -86725884 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 650 513 195 103 24 chr17 8546767 8546784 -86725867 + B1_Mm SINE Alu 122 145 -2 7 650 529 260 151 0 chr17 8546807 8546953 -86725698 + B3A SINE B2 3 170 -28 8 650 2861 114 14 14 chr17 8547075 8547493 -86725158 - MTC LTR MaLR 0 421 4 8 650 281 311 136 54 chr17 8547742 8548021 -86724630 - L2a LINE L2 -92 3334 3033 8 650 207 0 0 0 chr17 8548265 8548288 -86724363 + (TG)n Simple_repeat Simple_repeat 1 23 0 8 650 1085 176 19 34 chr17 8548288 8548494 -86724157 - B3 SINE B2 -13 203 1 8 650 219 66 30 90 chr17 8549607 8549674 -86722977 + (CAGG)n Simple_repeat Simple_repeat 4 66 0 8 650 314 211 19 87 chr17 8549674 8549778 -86722873 + ID_B1 SINE B4 121 217 -7 8 650 192 77 0 0 chr17 8550927 8550953 -86721698 + (TG)n Simple_repeat Simple_repeat 2 27 0 8 650 268 319 0 11 chr17 8551079 8551171 -86721480 + G-rich Low_complexity Low_complexity 1 91 0 8 650 596 158 130 20 chr17 8551541 8551686 -86720965 + B3 SINE B2 57 215 -1 8 650 349 216 78 22 chr17 8551906 8551996 -86720655 + RLTR16 LTR ERVK 1 95 -410 9 650 1201 138 224 34 chr17 8553283 8553359 -86719292 - RLTR20A LTR ERVK 0 541 441 9 650 270 0 0 0 chr17 8553359 8553389 -86719262 + (CA)n Simple_repeat Simple_repeat 2 31 0 9 650 1201 138 224 34 chr17 8553389 8553575 -86719076 - RLTR20A LTR ERVK -101 440 230 9 650 481 234 93 66 chr17 8553911 8554062 -86718589 + RSINE1 SINE B4 11 165 0 9 650 1004 156 6 0 chr17 8555401 8555561 -86717090 - MT2B2 LTR ERVL -80 504 344 9 650 1565 127 30 4 chr17 8555561 8555798 -86716853 - RLTR20A LTR ERVK -298 243 1 9 650 216 0 0 0 chr17 8556194 8556218 -86716433 + (GA)n Simple_repeat Simple_repeat 1 24 0 9 650 372 205 47 24 chr17 8556258 8556343 -86716308 - RSINE1 SINE B4 -31 134 48 9 650 281 172 0 15 chr17 8557020 8557085 -86715566 + CT-rich Low_complexity Low_complexity 2 65 0 9 650 908 162 6 0 chr17 8557086 8557116 -86715535 + polypyrimidine Low_complexity Low_complexity 151 180 0 9 650 1132 101 11 0 chr17 8557116 8557294 -86715357 + (TCC)n Simple_repeat Simple_repeat 1 180 0 9 650 908 162 6 0 chr17 8557294 8557442 -86715209 + CT-rich Low_complexity Low_complexity 2 150 0 1 650 785 252 76 47 chr17 8557600 8557875 -86714776 + ORR1E LTR MaLR 9 291 -68 1 650 210 342 37 25 chr17 8558423 8558504 -86714147 - ID SINE ID -141 83 2 1 650 374 278 6 0 chr17 8558765 8558934 -86713717 + (TG)n Simple_repeat Simple_repeat 1 170 0 1 650 800 160 247 6 chr17 8558934 8559104 -86713547 - RMER4B LTR ERVK 0 585 375 1 650 186 239 0 0 chr17 8559118 8559189 -86713462 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 650 308 241 22 112 chr17 8559273 8559362 -86713289 - B3A SINE B2 -8 190 110 1 650 333 296 26 9 chr17 8559484 8559617 -86713034 + MLT1A1 LTR MaLR 226 406 -2 1 650 589 201 12 127 chr17 8559735 8559900 -86712751 + B1_Mus2 SINE Alu 1 146 -1 1 650 378 57 0 0 chr17 8560322 8560375 -86712276 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 650 556 256 108 32 chr17 8560413 8560599 -86712052 + B3 SINE B2 1 200 -16 1 650 230 217 0 0 chr17 8561373 8561419 -86711232 + G-rich Low_complexity Low_complexity 1 46 0 1 650 432 0 0 0 chr17 8561948 8561996 -86710655 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 650 189 0 0 0 chr17 8562444 8562465 -86710186 + (TC)n Simple_repeat Simple_repeat 1 21 0 1 650 307 263 108 108 chr17 8562755 8562866 -86709785 + PB1D7 SINE Alu 9 119 -1 1 650 276 111 130 0 chr17 8563075 8563129 -86709522 + B3 SINE B2 150 210 -6 1 650 1937 150 143 11 chr17 8563251 8563622 -86709029 - MTC LTR MaLR -1 420 1 1 650 248 255 67 143 chr17 8563733 8563852 -86708799 - MTEb LTR MaLR -20 359 250 1 650 600 262 110 39 chr17 8563859 8564141 -86708510 - MLT1B LTR MaLR -81 309 8 1 650 328 290 15 44 chr17 8564197 8564334 -86708317 + L1MB7 LINE L1 6033 6165 -19 1 650 266 213 378 6 chr17 8564343 8564499 -86708152 - B3 SINE B2 -2 214 1 1 650 186 43 0 0 chr17 8564567 8564590 -86708061 + (GGGAA)n Simple_repeat Simple_repeat 1 23 0 1 650 265 24 48 0 chr17 8565564 8565606 -86707045 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 1 650 22 0 0 0 chr17 8565864 8565886 -86706765 + AT_rich Low_complexity Low_complexity 1 22 0 1 650 461 199 0 23 chr17 8565888 8565984 -86706667 - B1_Mus2 SINE Alu -1 148 55 1 650 567 0 0 0 chr17 8565994 8566057 -86706594 + (TTCC)n Simple_repeat Simple_repeat 4 66 0 1 650 860 194 0 7 chr17 8566978 8567123 -86705528 + B1_Mur4 SINE Alu 1 144 -6 1 650 588 225 215 45 chr17 8567276 8567453 -86705198 + B4 SINE B4 86 292 0 1 650 934 234 16 11 chr17 8567503 8567693 -86704958 + B3 SINE B2 2 192 -24 1 650 530 256 70 18 chr17 8567703 8567874 -86704777 - MTD LTR MaLR -8 411 232 1 650 852 225 111 55 chr17 8567890 8568234 -86704417 - RMER17C LTR ERVK -47 363 1 1 650 1115 159 136 34 chr17 8568234 8568444 -86704207 - MTD LTR MaLR -184 235 2 1 650 185 0 40 0 chr17 8568456 8568481 -86704170 + (TTA)n Simple_repeat Simple_repeat 1 26 0 1 650 558 0 0 0 chr17 8569434 8569496 -86703155 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 650 532 111 0 20 chr17 8570197 8570298 -86702353 + (TCTG)n Simple_repeat Simple_repeat 2 100 0 1 650 264 295 20 31 chr17 8570298 8570396 -86702255 - PB1D10 SINE Alu -10 107 11 1 650 470 276 126 70 chr17 8570998 8571197 -86701454 - B3 SINE B2 -6 210 1 1 650 712 265 12 18 chr17 8571938 8572103 -86700548 - RSINE1 SINE B4 0 165 2 1 650 714 105 16 81 chr17 8572203 8572327 -86700324 - PB1D9 SINE Alu 0 120 5 1 650 207 0 0 0 chr17 8572335 8572358 -86700293 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 650 332 47 0 0 chr17 8572360 8572403 -86700248 - B2_Mm2 SINE B2 -152 43 1 1 650 1583 52 5 0 chr17 8572560 8572752 -86699899 + B2_Mm1a SINE B2 1 193 0 1 650 913 128 7 45 chr17 8572829 8572984 -86699667 + B1_Mur4 SINE Alu 1 149 -1 1 650 3369 46 2 2 chr17 8573044 8573440 -86699211 + MTA_Mm LTR MaLR 1 396 0 1 650 581 267 25 0 chr17 8573728 8573848 -86698803 + B3 SINE B2 2 124 -92 1 650 1211 63 0 0 chr17 8573889 8574032 -86698619 + B1_Mus1 SINE Alu 1 143 -5 1 650 182 37 0 36 chr17 8574036 8574064 -86698587 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1 650 2360 110 6 17 chr17 8574069 8574429 -86698222 - RLTR15 LTR ERVK -3 356 1 1 650 3632 213 28 73 chr17 8574430 8574691 -86697960 - MYSERV6-int LTR ERVK -70 8889 8742 1 650 1155 58 0 7 chr17 8574691 8574830 -86697821 - B1_Mus1 SINE Alu -10 138 1 1 650 3632 207 20 74 chr17 8574830 8575700 -86696951 - MYSERV6-int LTR ERVK -218 8741 7935 1 650 414 0 0 0 chr17 8575896 8575942 -86696709 + (TTA)n Simple_repeat Simple_repeat 1 46 0 1 650 492 234 51 51 chr17 8575942 8576059 -86696592 - B1_Mur4 SINE Alu -12 138 22 1 650 344 149 46 0 chr17 8576144 8576231 -86696420 - MYSERV6-int LTR ERVK -2462 6497 6407 1 650 333 175 15 31 chr17 8576336 8576401 -86696250 - B1_Mur2 SINE Alu -54 95 32 1 650 210 118 0 0 chr17 8576813 8576847 -86695804 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 1 650 2007 109 84 41 chr17 8577685 8577967 -86694684 - RLTR15 LTR ERVK 0 359 62 1 650 1609 26 0 25 chr17 8577967 8578165 -86694486 - B2_Mm1a SINE B2 0 193 1 1 650 2007 109 84 41 chr17 8578165 8578226 -86694425 - RLTR15 LTR ERVK -298 61 1 1 650 226 217 49 16 chr17 8578352 8578413 -86694238 + Lx8 LINE L1 6288 6350 -1123 1 650 1445 287 118 72 chr17 8578421 8578524 -86694127 + Lx8 LINE L1 6328 6419 -1054 1 650 1018 221 29 5 chr17 8578524 8578733 -86693918 + B3 SINE B2 1 214 -2 1 650 1445 287 118 72 chr17 8578733 8578831 -86693820 + Lx8 LINE L1 6420 6497 -976 1 650 975 101 0 0 chr17 8578831 8578999 -86693652 + (CGATG)n Simple_repeat Simple_repeat 5 172 0 1 650 1445 287 118 72 chr17 8578999 8579663 -86692988 + Lx8 LINE L1 6498 7234 -239 1 650 2137 98 0 48 chr17 8579668 8579954 -86692697 + ORR1A2 LTR MaLR 1 272 -55 1 650 1269 44 6 0 chr17 8579954 8580113 -86692538 + L1Md_T LINE L1 6423 6582 0 1 650 2137 98 0 48 chr17 8580113 8580159 -86692492 + ORR1A2 LTR MaLR 273 317 -10 1 650 270 56 0 0 chr17 8580867 8580903 -86691748 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 650 1011 232 52 59 chr17 8584058 8584328 -86688323 + B4A SINE B4 25 292 0 1 650 378 258 0 0 chr17 8584328 8584460 -86688191 + (CA)n Simple_repeat Simple_repeat 1 132 0 1 650 236 209 47 0 chr17 8584603 8584646 -86688005 - PB1 SINE Alu -7 120 76 1 650 213 39 0 0 chr17 8585444 8585470 -86687181 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1 650 328 276 0 140 chr17 8585703 8585745 -86686906 + MT2B LTR ERVL 135 156 -445 1 650 850 155 55 27 chr17 8585745 8585891 -86686760 + B1_Mur4 SINE Alu 1 150 0 1 650 237 132 0 0 chr17 8585893 8585931 -86686720 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 1 650 449 283 35 17 chr17 8586058 8586173 -86686478 - PB1D10 SINE Alu 0 117 1 1 650 456 253 54 8 chr17 8586737 8586873 -86685778 + MLT1B LTR MaLR 265 467 0 1 650 188 268 121 12 chr17 8586906 8586989 -86685662 + L3 LINE CR1 4205 4296 -193 1 650 571 138 75 0 chr17 8587005 8587099 -86685552 + PB1D9 SINE Alu 13 113 -7 1 650 787 305 37 17 chr17 8587375 8587672 -86684979 - Lx9 LINE L1 -363 7281 6979 1 650 941 152 198 22 chr17 8587693 8587875 -86684776 - B3 SINE B2 -1 215 2 1 650 590 233 30 148 chr17 8587934 8588080 -86684571 - B3 SINE B2 -6 210 92 1 650 1218 61 0 0 chr17 8588080 8588228 -86684423 - B1_Mus1 SINE Alu 0 148 1 1 650 590 233 30 148 chr17 8588228 8588318 -86684333 - B3 SINE B2 -125 91 2 1 650 1196 101 6 6 chr17 8588826 8588996 -86683655 - B2_Mm2 SINE B2 -11 184 15 1 650 666 211 121 60 chr17 8589023 8589205 -86683446 - B3A SINE B2 -5 193 1 1 650 243 218 257 26 chr17 8590477 8590590 -86682061 + MER5A DNA MER1_type 47 185 -4 1 650 310 186 267 44 chr17 8590883 8590973 -86681678 - PB1 SINE Alu -6 121 12 1 650 642 26 0 0 chr17 8591218 8591294 -86681357 + (TG)n Simple_repeat Simple_repeat 1 76 0 1 650 278 146 0 0 chr17 8591345 8591386 -86681265 - MLT1A1 LTR MaLR -69 339 299 1 650 282 56 0 0 chr17 8591404 8591440 -86681211 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 650 429 109 0 0 chr17 8592036 8592100 -86680551 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 650 491 244 123 22 chr17 8592127 8592265 -86680386 - B4A SINE B4 -42 250 99 1 650 875 94 8 30 chr17 8592429 8592561 -86680090 - B1_Mur4 SINE Alu -13 137 9 1 650 247 314 0 75 chr17 8592834 8592867 -86679784 + B4 SINE B4 59 84 -208 1 650 340 206 0 0 chr17 8592867 8592930 -86679721 + B1_Mur4 SINE Alu 1 63 -87 1 650 205 250 26 26 chr17 8593051 8593129 -86679522 + CT-rich Low_complexity Low_complexity 6 83 0 1 650 338 205 11 39 chr17 8593236 8593414 -86679237 + (CA)n Simple_repeat Simple_repeat 2 174 0 1 650 537 159 18 18 chr17 8593460 8593626 -86679025 + (CA)n Simple_repeat Simple_repeat 2 167 0 1 650 304 70 0 65 chr17 8593628 8593674 -86678977 + HAL1-3A_ME LINE L1 1976 2018 -840 1 650 395 195 8 0 chr17 8593685 8593808 -86678843 + (CA)n Simple_repeat Simple_repeat 1 124 0 1 650 254 246 18 0 chr17 8593847 8593904 -86678747 - RCHARR1 DNA MER1_type -14 960 903 1 650 241 257 28 14 chr17 8593937 8594008 -86678643 - RCHARR1 DNA MER1_type -307 667 596 1 650 25 0 0 0 chr17 8594137 8594162 -86678489 + AT_rich Low_complexity Low_complexity 1 25 0 1 650 323 338 22 29 chr17 8594300 8594437 -86678214 + B4 SINE B4 4 139 -153 1 650 376 198 11 58 chr17 8594607 8594795 -86677856 + C-rich Low_complexity Low_complexity 1 179 0 1 650 322 208 11 56 chr17 8594817 8594995 -86677656 + C-rich Low_complexity Low_complexity 3 172 0 1 650 378 0 0 0 chr17 8595373 8595415 -86677236 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 650 603 103 0 0 chr17 8595415 8595512 -86677139 + (GA)n Simple_repeat Simple_repeat 2 98 0 1 650 540 163 28 31 chr17 8595519 8595842 -86676809 + (TG)n Simple_repeat Simple_repeat 1 321 0 1 650 239 234 15 15 chr17 8595853 8595918 -86676733 + (TG)n Simple_repeat Simple_repeat 1 65 0 1 650 2129 75 22 13 chr17 8596941 8597252 -86675399 + RLTRETN_Mm LTR ERVK 1 314 -8 1 650 978 122 14 7 chr17 8597321 8597462 -86675189 - B1_Mur4 SINE Alu -5 145 4 1 650 240 35 0 0 chr17 8598026 8598055 -86674596 + (GGAA)n Simple_repeat Simple_repeat 4 32 0 2 650 183 353 82 0 chr17 8598105 8598190 -86674461 + MIRm SINE MIR 94 185 -91 2 650 1187 51 0 0 chr17 8598739 8598876 -86673775 + B1_Mm SINE Alu 2 138 -9 2 650 243 0 0 0 chr17 8598876 8598903 -86673748 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 650 238 269 116 29 chr17 8598934 8599003 -86673648 + ID4 SINE ID 9 83 0 2 650 490 200 75 9 chr17 8600048 8600154 -86672497 + B1_Mur3 SINE Alu 3 115 -34 2 650 297 0 0 0 chr17 8600469 8600502 -86672149 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 650 447 294 43 61 chr17 8600608 8600631 -86672020 + ID_B1 SINE B4 64 223 -1 2 650 721 163 13 33 chr17 8600631 8600771 -86671880 + B1_Mur3 SINE Alu 2 149 -1 2 650 38 22 0 0 chr17 8600772 8600817 -86671834 + AT_rich Low_complexity Low_complexity 1 45 0 2 650 1111 62 27 20 chr17 8600897 8601044 -86671607 - B1_Mus1 SINE Alu 0 148 1 2 650 241 148 37 0 chr17 8601309 8601363 -86671288 + (TCTCTG)n Simple_repeat Simple_repeat 5 60 0 2 650 288 0 0 0 chr17 8601363 8601395 -86671256 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 650 254 263 35 17 chr17 8601411 8601469 -86671182 - PB1D10 SINE Alu -33 84 26 2 650 259 45 22 22 chr17 8602448 8602494 -86670157 + (CCA)n Simple_repeat Simple_repeat 2 47 0 2 650 371 139 16 54 chr17 8602665 8602794 -86669857 + GA-rich Low_complexity Low_complexity 1 124 0 2 650 305 309 12 0 chr17 8602803 8602887 -86669764 + G-rich Low_complexity Low_complexity 4 88 0 2 650 432 218 57 38 chr17 8603118 8603223 -86669428 - MTEb LTR MaLR -24 355 249 2 650 459 129 9 123 chr17 8603611 8603717 -86668934 + MT2B LTR ERVL 171 264 -337 2 650 995 34 0 0 chr17 8603622 8603741 -86668910 + B1_Mus2 SINE Alu 18 136 -11 2 650 270 0 0 0 chr17 8603741 8603771 -86668880 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2 650 318 267 0 51 chr17 8603810 8603889 -86668762 - RSINE1 SINE B4 -1 164 90 2 650 354 289 63 139 chr17 8603882 8604119 -86668532 - B4A SINE B4 -4 220 2 2 650 369 292 140 68 chr17 8604122 8604357 -86668294 - L1MD LINE L1 -1536 4610 4359 2 650 368 258 109 35 chr17 8604840 8604872 -86667779 - RMER12 LTR ERVK -312 1010 981 2 650 299 85 21 0 chr17 8604872 8604919 -86667732 + (CATA)n Simple_repeat Simple_repeat 3 50 0 2 650 368 258 109 35 chr17 8604919 8605115 -86667536 - RMER12 LTR ERVK -342 980 766 2 650 346 255 0 46 chr17 8605302 8605408 -86667243 + ID4_ SINE ID 6 107 -45 2 650 200 86 29 0 chr17 8606135 8606170 -86666481 + (TTCC)n Simple_repeat Simple_repeat 4 39 0 2 650 1145 36 15 0 chr17 8608067 8608204 -86664447 - B1_Mm SINE Alu -8 139 1 2 650 829 203 0 13 chr17 8609044 8609194 -86663457 + B1_Mur1 SINE Alu 1 148 -1 2 650 331 358 0 0 chr17 8609392 8609512 -86663139 + (CA)n Simple_repeat Simple_repeat 1 120 0 2 650 883 289 9 9 chr17 8610327 8610547 -86662104 + ID_B1 SINE B4 2 221 -3 2 650 641 248 49 43 chr17 8611108 8611272 -86661379 + RSINE1 SINE B4 1 165 0 2 650 254 274 0 19 chr17 8611282 8611390 -86661261 + (CATATA)n Simple_repeat Simple_repeat 5 110 0 2 650 218 319 0 14 chr17 8611390 8611463 -86661188 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 650 441 276 0 0 chr17 8611482 8611627 -86661024 + (CA)n Simple_repeat Simple_repeat 2 146 0 2 650 405 248 8 9 chr17 8611921 8612034 -86660617 + B1_Mus2 SINE Alu 21 136 -13 2 650 321 269 13 13 chr17 8612112 8612191 -86660460 - ID4 SINE ID -2 81 3 2 650 425 146 0 22 chr17 8612923 8613014 -86659637 + (CATA)n Simple_repeat Simple_repeat 4 92 0 2 650 210 304 6 0 chr17 8613017 8613204 -86659447 + (CA)n Simple_repeat Simple_repeat 1 188 0 2 650 22 0 0 0 chr17 8613640 8613662 -86658989 + AT_rich Low_complexity Low_complexity 1 22 0 2 650 1144 173 45 20 chr17 8613674 8613875 -86658776 + B3 SINE B2 2 207 -9 2 650 3280 60 2 10 chr17 8613903 8614306 -86658345 + MTB LTR MaLR 1 400 0 2 650 1333 106 16 0 chr17 8615184 8615372 -86657279 - B2_Mm2 SINE B2 -3 192 2 2 650 1062 141 10 61 chr17 8615593 8615790 -86656861 - B2_Mm2 SINE B2 -7 188 2 2 650 348 224 13 0 chr17 8616186 8616262 -86656389 + ID4_ SINE ID 5 81 -2 2 650 583 235 33 0 chr17 8616293 8616436 -86656215 + B3 SINE B2 67 214 -2 2 650 511 118 30 2 chr17 8616463 8616554 -86656097 + B1_Mus2 SINE Alu 24 115 -34 2 650 657 123 0 0 chr17 8616604 8616710 -86655941 + (GGAA)n Simple_repeat Simple_repeat 1 106 0 2 650 772 259 96 0 chr17 8617302 8617499 -86655152 - B3 SINE B2 0 216 1 2 650 707 229 40 23 chr17 8617607 8617781 -86654870 - B3A SINE B2 -20 178 2 2 650 386 202 40 17 chr17 8618395 8618571 -86654080 + GA-rich Low_complexity Low_complexity 1 180 0 2 650 251 279 14 29 chr17 8618580 8618650 -86654001 + B1F SINE Alu 27 95 -54 2 650 210 194 15 46 chr17 8618654 8618719 -86653932 + GA-rich Low_complexity Low_complexity 4 66 0 2 650 231 286 32 0 chr17 8618871 8618934 -86653717 - MER46C DNA MER2_type -10 328 264 2 650 866 230 57 38 chr17 8618992 8619204 -86653447 + B3 SINE B2 1 216 0 2 650 734 215 7 0 chr17 8619480 8619615 -86653036 + B3 SINE B2 1 136 -80 2 650 330 302 26 70 chr17 8619621 8619735 -86652916 + RSINE1 SINE B4 57 165 0 2 650 434 191 21 21 chr17 8619754 8619850 -86652801 - B1_Mur1 SINE Alu -20 129 34 2 650 217 227 91 0 chr17 8619921 8619965 -86652686 + B3A SINE B2 57 104 -94 2 650 523 103 26 0 chr17 8619966 8620044 -86652607 - L1Md_F3 LINE L1 -135 6449 6370 2 650 501 182 22 29 chr17 8620055 8620334 -86652317 + (CA)n Simple_repeat Simple_repeat 1 276 0 2 650 917 68 20 7 chr17 8620349 8620497 -86652154 + (CA)n Simple_repeat Simple_repeat 1 150 0 2 650 790 234 178 21 chr17 8620500 8620867 -86651784 + RLTR28B LTR ERVL 1 443 -38 2 650 1277 216 191 6 chr17 8620990 8621325 -86651326 + MTD LTR MaLR 18 414 -5 2 650 921 202 72 48 chr17 8621352 8621642 -86651009 + MTC-int LTR MaLR 50 441 -817 2 650 1073 140 0 0 chr17 8621657 8621807 -86650844 + B1_Mur4 SINE Alu 1 150 0 2 650 529 248 120 0 chr17 8621842 8621967 -86650684 + B1F2 SINE Alu 5 144 -5 2 650 483 18 0 0 chr17 8623254 8623310 -86649341 + (GA)n Simple_repeat Simple_repeat 1 56 0 2 650 360 0 0 0 chr17 8624863 8624903 -86647748 + (TTATA)n Simple_repeat Simple_repeat 5 44 0 2 650 221 170 0 36 chr17 8629621 8629676 -86642975 + T-rich Low_complexity Low_complexity 3 55 0 2 650 228 277 35 24 chr17 8629680 8629704 -86642947 - MT2B2 LTR ERVL -307 277 216 2 650 252 259 0 0 chr17 8629704 8629758 -86642893 - PB1D10 SINE Alu -22 95 42 2 650 334 269 13 0 chr17 8632422 8632500 -86640151 + ID4 SINE ID 3 81 -2 2 650 1048 91 39 0 chr17 8633339 8633493 -86639158 - URR1A DNA MER1_type 0 226 67 2 650 363 224 187 57 chr17 8633631 8633754 -86638897 - B1F1 SINE Alu -1 148 10 2 650 297 0 0 0 chr17 8636030 8636063 -86636588 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 650 207 220 0 0 chr17 8636737 8636787 -86635864 + (TCCA)n Simple_repeat Simple_repeat 1 50 0 2 650 662 288 96 101 chr17 8636787 8637045 -86635606 - MER44B DNA MER2_type -134 416 143 2 650 919 214 72 29 chr17 8637045 8637252 -86635399 - B3 SINE B2 0 216 1 2 650 662 288 96 101 chr17 8637252 8637368 -86635283 - MER44B DNA MER2_type -408 142 44 2 650 351 277 68 23 chr17 8637634 8637767 -86634884 - B3 SINE B2 -77 139 1 2 650 1278 78 67 0 chr17 8637850 8638007 -86634644 + B2_Mm2 SINE B2 3 159 -36 2 650 201 74 0 0 chr17 8638007 8638034 -86634617 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 2 650 1278 78 67 0 chr17 8638034 8638056 -86634595 + B2_Mm2 SINE B2 160 193 -2 2 650 1076 313 58 143 chr17 8638371 8638522 -86634129 - MTE-int LTR MaLR -732 848 698 2 650 182 37 0 36 chr17 8638522 8638550 -86634101 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 650 1076 313 58 143 chr17 8638550 8639210 -86633441 - MTE-int LTR MaLR -883 697 107 2 650 903 87 0 0 chr17 8639210 8639336 -86633315 + (TTTC)n Simple_repeat Simple_repeat 3 128 0 2 650 1347 38 0 0 chr17 8639336 8639495 -86633156 - B2_Mm1a SINE B2 -33 160 2 2 650 228 316 25 12 chr17 8639495 8639574 -86633077 - MTE-int LTR MaLR -1466 114 35 2 650 252 111 0 0 chr17 8639574 8639619 -86633032 + (CAA)n Simple_repeat Simple_repeat 3 47 0 2 650 575 318 121 44 chr17 8639637 8639976 -86632675 - ORR1D2 LTR MaLR 0 370 6 2 650 31 26 0 0 chr17 8640150 8640188 -86632463 + AT_rich Low_complexity Low_complexity 1 38 0 2 650 625 130 185 0 chr17 8641377 8641485 -86631166 - B2_Mm2 SINE B2 -66 129 2 2 650 337 187 13 0 chr17 8642122 8642197 -86630454 - L1MC LINE L1 -1476 4670 4595 2 650 1179 68 0 7 chr17 8642248 8642387 -86630264 + B1_Mus1 SINE Alu 2 140 -8 2 650 432 51 0 0 chr17 8642387 8642446 -86630205 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 2 650 891 145 13 33 chr17 8642842 8642992 -86629659 - B1_Mur3 SINE Alu -1 148 2 2 650 422 283 127 90 chr17 8643231 8643499 -86629152 - B4 SINE B4 -10 282 5 2 650 1435 44 43 5 chr17 8643594 8643778 -86628873 + B2_Mm2 SINE B2 1 191 -4 2 650 487 161 0 12 chr17 8644149 8644231 -86628420 + MTD LTR MaLR 13 93 -326 2 650 294 234 0 30 chr17 8644224 8644290 -86628361 + MTD LTR MaLR 354 417 -2 2 650 1105 206 119 3 chr17 8644303 8644539 -86628112 + RMER1A Other Other 90 463 -567 2 650 3296 46 5 10 chr17 8644539 8644937 -86627714 - MTA_Mm LTR MaLR 0 396 1 2 650 1105 196 150 3 chr17 8644937 8645043 -86627608 + RMER1A Other Other 464 598 -432 2 650 391 111 0 0 chr17 8645044 8645098 -86627553 - RMER1A Other Other -288 742 689 2 650 641 198 122 77 chr17 8645136 8645317 -86627334 + B3A SINE B2 1 189 -9 2 650 1284 103 11 11 chr17 8645341 8645527 -86627124 + B2_Mm2 SINE B2 1 186 -9 3 650 24 32 0 0 chr17 8645529 8645560 -86627091 + AT_rich Low_complexity Low_complexity 1 31 0 3 650 459 253 11 0 chr17 8645566 8645657 -86626994 - RLTR18B LTR ERVK -420 92 1 3 650 526 187 9 18 chr17 8645657 8645766 -86626885 + MTD-int LTR MaLR 1143 1250 -8 3 650 853 174 96 0 chr17 8645752 8645919 -86626732 + MTD LTR MaLR 21 203 -216 3 650 532 87 0 0 chr17 8645973 8646042 -86626609 + MTD LTR MaLR 351 419 0 3 650 383 323 33 13 chr17 8646042 8646313 -86626338 + L1ME1 LINE L1 5645 5923 -241 3 650 2779 118 34 14 chr17 8646565 8646978 -86625673 - MTC LTR MaLR 0 421 1 3 650 254 316 10 31 chr17 8647288 8647386 -86625265 + (CA)n Simple_repeat Simple_repeat 2 97 0 3 650 446 264 0 58 chr17 8647400 8647589 -86625062 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 3 650 227 349 73 114 chr17 8647654 8647900 -86624751 - RMER12 LTR ERVK -352 970 735 3 650 498 213 21 0 chr17 8649294 8649388 -86623263 - B4A SINE B4 -192 100 5 3 650 215 152 22 0 chr17 8650541 8650587 -86622064 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 650 576 145 0 0 chr17 8650623 8650740 -86621911 + (CA)n Simple_repeat Simple_repeat 2 118 0 3 651 26 50 0 0 chr17 8651153 8651193 -86621458 + AT_rich Low_complexity Low_complexity 1 40 0 3 651 210 245 19 26 chr17 8651263 8651360 -86621291 + A-rich Low_complexity Low_complexity 1 96 0 3 651 1615 229 72 15 chr17 8651433 8651823 -86620828 + MTD LTR MaLR 8 419 0 3 651 811 331 75 28 chr17 8651824 8652571 -86620080 - L1MB5 LINE L1 -229 5945 5164 3 651 375 23 0 0 chr17 8652574 8652618 -86620033 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 651 267 206 348 0 chr17 8652618 8652710 -86619941 - RSINE1 SINE B4 -41 124 1 3 651 27 62 0 0 chr17 8652752 8652800 -86619851 + AT_rich Low_complexity Low_complexity 1 48 0 3 651 1058 263 54 40 chr17 8652838 8653222 -86619429 - RLTR11B LTR ERVK -42 399 1 3 651 923 216 10 50 chr17 8653244 8653444 -86619207 - B3 SINE B2 -23 193 2 3 651 760 219 7 27 chr17 8653471 8653621 -86619030 - RSINE1 SINE B4 -8 157 11 3 651 501 233 117 36 chr17 8653636 8653885 -86618766 - L1MB5 LINE L1 -1015 5131 4863 3 651 332 256 89 0 chr17 8654600 8654690 -86617961 + B3A SINE B2 95 192 -6 3 651 397 330 60 25 chr17 8654710 8655027 -86617624 + L1M3 LINE L1 3359 3686 -2457 3 651 406 252 114 26 chr17 8655032 8655146 -86617505 + B3A SINE B2 1 124 -74 3 651 345 24 0 0 chr17 8655156 8655198 -86617453 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 651 22 35 0 0 chr17 8655198 8655227 -86617424 + AT_rich Low_complexity Low_complexity 1 29 0 3 651 947 126 0 34 chr17 8655236 8655384 -86617267 + B1_Mus1 SINE Alu 6 148 0 3 651 580 260 96 26 chr17 8655545 8655817 -86616834 + L1M3 LINE L1 3780 4070 -2070 3 651 266 258 28 145 chr17 8655828 8655973 -86616678 + L1M3 LINE L1 4142 4269 -1871 3 651 317 176 20 0 chr17 8656051 8656102 -86616549 + B1F1 SINE Alu 1 52 -97 3 651 874 215 76 15 chr17 8656745 8656943 -86615708 - B3 SINE B2 -6 210 1 3 651 648 250 225 24 chr17 8657786 8658075 -86614576 - MTEb LTR MaLR -20 359 13 3 651 1013 69 0 0 chr17 8658478 8658608 -86614043 + B1_Mus1 SINE Alu 7 136 -12 3 651 468 272 29 126 chr17 8658481 8658609 -86614042 + B4 SINE B4 94 215 -77 3 651 234 0 0 0 chr17 8658609 8658635 -86614016 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 3 651 189 0 0 0 chr17 8658642 8658663 -86613988 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 3 651 468 272 29 126 chr17 8658663 8658732 -86613919 + B4 SINE B4 217 279 -13 3 651 362 245 49 0 chr17 8659014 8659111 -86613540 + PB1D7 SINE Alu 25 128 -21 3 651 351 141 0 0 chr17 8659112 8659190 -86613461 + (GA)n Simple_repeat Simple_repeat 1 78 0 3 651 546 57 0 0 chr17 8659207 8659277 -86613374 + (GGA)n Simple_repeat Simple_repeat 1 70 0 3 651 461 17 17 0 chr17 8660135 8660193 -86612458 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 651 603 177 35 0 chr17 8660199 8660313 -86612338 - B1_Mur1 SINE Alu -12 137 12 3 651 649 317 15 25 chr17 8660868 8661072 -86611579 - B4A SINE B4 -87 205 4 3 651 431 213 91 18 chr17 8661246 8661356 -86611295 + PB1D7 SINE Alu 2 119 -1 3 651 368 305 165 0 chr17 8662191 8662391 -86610260 - L1M2 LINE L1 -825 5318 5086 3 651 322 250 0 21 chr17 8662406 8662500 -86610151 + Lx9 LINE L1 7359 7450 -194 3 651 235 209 134 0 chr17 8662567 8662634 -86610017 + B1_Mur4 SINE Alu 74 149 -1 3 651 855 139 72 44 chr17 8662679 8662859 -86609792 + B2_Mm2 SINE B2 2 186 -9 3 651 340 337 42 27 chr17 8662862 8663124 -86609527 - L1M2 LINE L1 -1604 4536 4271 3 651 1192 48 7 7 chr17 8663378 8663526 -86609125 - B1_Mus1 SINE Alu 0 148 1 3 651 244 203 0 17 chr17 8663531 8663591 -86609060 - L1M2 LINE L1 -4907 1942 1884 3 651 1296 129 0 15 chr17 8663626 8663823 -86608828 - B2_Mm2 SINE B2 -1 194 1 3 651 228 242 16 0 chr17 8663831 8663893 -86608758 - L1M2 LINE L1 -4962 1807 1745 3 651 726 261 31 26 chr17 8665039 8665232 -86607419 - B3A SINE B2 0 198 5 3 651 208 283 0 36 chr17 8666024 8666079 -86606572 - MIRm SINE MIR -13 263 211 3 651 265 56 0 0 chr17 8666423 8666459 -86606192 + B2_Mm2 SINE B2 2 37 -158 3 651 2979 109 29 43 chr17 8666459 8666947 -86605704 + Lx LINE L1 6174 6654 0 3 651 11283 63 3 1 chr17 8667077 8668589 -86604062 - L1Md_F2 LINE L1 -1159 4724 3210 3 651 6523 61 0 0 chr17 8668589 8669437 -86603214 + L1Md_F2 LINE L1 4739 5586 -297 3 651 7862 68 1 4 chr17 8669437 8670433 -86602218 + L1Md_F2 LINE L1 5587 6579 -3 3 651 816 196 0 7 chr17 8671019 8671163 -86601488 - B3 SINE B2 -71 145 3 3 651 21 0 0 0 chr17 8671563 8671584 -86601067 + AT_rich Low_complexity Low_complexity 1 21 0 3 651 405 0 0 0 chr17 8672232 8672277 -86600374 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 651 180 0 0 0 chr17 8673457 8673477 -86599174 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 3 651 317 206 49 171 chr17 8673788 8673911 -86598740 + MT2B LTR ERVL 150 257 -344 3 651 724 176 26 84 chr17 8673801 8673956 -86598695 + B1_Mus2 SINE Alu 2 147 0 3 651 261 289 48 170 chr17 8673956 8673968 -86598683 + B4A SINE B4 123 231 -61 3 651 1220 241 145 59 chr17 8673988 8674080 -86598571 - MT2A LTR ERVL -1 532 464 3 651 188 111 28 0 chr17 8674080 8674116 -86598535 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 651 1220 241 145 59 chr17 8674116 8674513 -86598138 - MT2A LTR ERVL -70 463 1 3 651 1244 48 0 0 chr17 8674555 8674702 -86597949 - B1_Mus1 SINE Alu 0 148 2 3 651 543 214 55 16 chr17 8675413 8675541 -86597110 + B3 SINE B2 3 135 -81 3 651 243 88 0 0 chr17 8675542 8675576 -86597075 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 651 219 271 0 0 chr17 8676221 8676269 -86596382 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 3 651 315 140 0 0 chr17 8676383 8676433 -86596218 - U2 snRNA snRNA -128 60 11 3 651 521 290 6 94 chr17 8676472 8676632 -86596019 - B1_Mur1 SINE Alu -1 148 3 3 651 360 0 0 0 chr17 8677166 8677206 -86595445 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 651 238 299 105 33 chr17 8677216 8677368 -86595283 + L1M5 LINE L1 5704 5866 -313 3 651 396 0 0 0 chr17 8677441 8677485 -86595166 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 651 651 26 0 0 chr17 8677485 8677561 -86595090 + (GA)n Simple_repeat Simple_repeat 1 77 0 3 651 984 182 6 23 chr17 8677568 8677742 -86594909 - ORR1C2 LTR MaLR -213 171 1 3 651 677 272 24 6 chr17 8677742 8677831 -86594820 - B4 SINE B4 -117 175 88 3 651 414 0 0 0 chr17 8677831 8677877 -86594774 + (TTTTA)n Simple_repeat Simple_repeat 4 49 0 3 651 677 272 24 6 chr17 8677877 8677957 -86594694 - B4 SINE B4 -205 87 4 3 651 848 189 104 10 chr17 8678044 8678236 -86594415 - B3 SINE B2 -6 210 1 3 651 319 211 11 11 chr17 8679763 8679854 -86592797 + GA-rich Low_complexity Low_complexity 1 91 0 3 651 1529 58 0 0 chr17 8682576 8682764 -86589887 - B2_Mm1a SINE B2 -5 188 1 3 651 2280 127 89 45 chr17 8682776 8683179 -86589472 + MTC LTR MaLR 1 421 0 3 651 1289 34 0 0 chr17 8683199 8683345 -86589306 + B1_Mm SINE Alu 2 147 0 3 651 255 61 0 0 chr17 8683348 8683381 -86589270 + (A)n Simple_repeat Simple_repeat 1 33 0 3 651 21 0 0 0 chr17 8683415 8683436 -86589215 + AT_rich Low_complexity Low_complexity 1 21 0 3 651 1593 188 103 29 chr17 8683528 8683868 -86588783 - ORR1D2 LTR MaLR -5 365 1 3 651 781 296 117 11 chr17 8683879 8684248 -86588403 + L1MA5 LINE L1 5493 5900 -400 3 651 522 292 138 42 chr17 8684939 8685396 -86587255 + L1MEc LINE L1 590 1090 -5310 3 651 1005 141 7 13 chr17 8685555 8685706 -86586945 + B1_Mur4 SINE Alu 1 150 0 3 651 363 253 23 99 chr17 8686150 8686321 -86586330 + MTD LTR MaLR 257 414 -5 3 651 268 275 11 21 chr17 8686368 8686461 -86586190 + L1MEc LINE L1 3162 3253 -3066 3 651 1960 148 18 79 chr17 8686465 8686845 -86585806 + ORR1B1 LTR MaLR 30 386 -8 3 651 776 295 32 10 chr17 8686869 8687085 -86585566 - B3A SINE B2 -6 210 1 3 651 833 174 7 0 chr17 8687167 8687305 -86585346 + B3 SINE B2 1 139 -77 3 651 1839 124 64 3 chr17 8687553 8687835 -86584816 - ORR1B1 LTR MaLR -7 387 89 3 651 1365 85 17 0 chr17 8688177 8688353 -86584298 - B2_Mm2 SINE B2 -14 181 3 3 651 234 118 0 0 chr17 8689055 8689089 -86583562 - B1_Mur1 SINE Alu -41 108 75 3 651 308 310 113 17 chr17 8689136 8689251 -86583400 - B1_Mus2 SINE Alu -21 126 1 3 651 261 0 0 0 chr17 8690409 8690438 -86582213 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 651 1102 159 78 42 chr17 8692048 8692265 -86580386 + URR1A DNA MER1_type 2 226 0 3 651 224 170 19 0 chr17 8692372 8692425 -86580226 + CT-rich Low_complexity Low_complexity 1 54 0 3 651 432 287 24 54 chr17 8692716 8692882 -86579769 - L1ME1 LINE L1 -6 6173 6013 3 651 415 244 30 45 chr17 8693001 8693134 -86579517 + MLT1A LTR MaLR 2 132 -242 3 651 201 161 0 0 chr17 8693575 8693606 -86579045 + polypyrimidine Low_complexity Low_complexity 3 33 0 3 651 266 275 16 48 chr17 8693606 8693781 -86578870 + RMER17D LTR ERVK 282 470 -419 3 651 698 176 31 23 chr17 8693781 8693803 -86578848 - B1_Mur4 SINE Alu -21 129 106 4 651 948 119 11 11 chr17 8693803 8693981 -86578670 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 4 651 266 275 16 48 chr17 8693981 8694031 -86578620 + RMER17D LTR ERVK 471 520 -369 3 651 698 176 31 23 chr17 8694031 8694086 -86578565 - B1_Mur4 SINE Alu -45 105 1 4 651 821 227 123 106 chr17 8694092 8694239 -86578412 + MTD LTR MaLR 114 252 -167 4 651 189 0 0 0 chr17 8694239 8694260 -86578391 + (TCTG)n Simple_repeat Simple_repeat 2 22 0 4 651 821 227 123 106 chr17 8694260 8694413 -86578238 + MTD LTR MaLR 253 418 -1 4 651 230 323 23 46 chr17 8694428 8694558 -86578093 - L1MEg LINE L1 -2526 3620 3494 4 651 376 301 141 120 chr17 8694559 8695125 -86577526 - L1MB8 LINE L1 -6 6172 5595 4 651 275 321 36 43 chr17 8695516 8695561 -86577090 - L1MEg LINE L1 -4899 1343 1300 4 651 2340 96 41 0 chr17 8695561 8695875 -86576776 - ORR1A2 LTR MaLR 0 327 1 4 651 275 321 36 43 chr17 8695875 8695969 -86576682 - L1MEg LINE L1 -4943 1299 1205 4 651 306 0 0 0 chr17 8695979 8696013 -86576638 + (TCTG)n Simple_repeat Simple_repeat 1 34 0 4 651 2358 156 244 8 chr17 8696509 8697000 -86575651 - RMER19C LTR ERVK 0 611 5 4 651 1118 222 109 32 chr17 8697273 8697557 -86575094 - ORR1E LTR MaLR -50 309 4 4 651 881 231 51 0 chr17 8698087 8698282 -86574369 - B3 SINE B2 -7 209 5 4 651 686 191 14 2 chr17 8698345 8698473 -86574178 + B3 SINE B2 17 158 -35 4 651 49 0 0 0 chr17 8698533 8698582 -86574069 + AT_rich Low_complexity Low_complexity 1 49 0 4 651 21 36 0 0 chr17 8701051 8701079 -86571572 + AT_rich Low_complexity Low_complexity 1 28 0 4 651 194 62 31 0 chr17 8701080 8701112 -86571539 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 4 651 1182 43 0 0 chr17 8702284 8702423 -86570228 + B1_Mus1 SINE Alu 1 139 -9 4 651 243 0 0 0 chr17 8702423 8702450 -86570201 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 651 433 305 116 22 chr17 8702583 8702901 -86569750 + L1MB3 LINE L1 5797 6144 -39 4 651 235 305 0 0 chr17 8704153 8704212 -86568439 - ID4 SINE ID -6 77 19 4 651 443 265 0 10 chr17 8704312 8704415 -86568236 + MTE2b LTR MaLR 8 109 -270 4 651 297 0 0 0 chr17 8705381 8705414 -86567237 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 651 405 0 0 0 chr17 8705414 8705458 -86567193 + (GA)n Simple_repeat Simple_repeat 1 45 0 4 651 308 192 0 27 chr17 8706452 8706527 -86566124 + (CACG)n Simple_repeat Simple_repeat 3 75 0 4 651 372 22 0 0 chr17 8706595 8706640 -86566011 + (GA)n Simple_repeat Simple_repeat 1 45 0 4 651 272 233 37 37 chr17 8707474 8707581 -86565070 + (TGGA)n Simple_repeat Simple_repeat 3 109 0 4 651 792 285 39 5 chr17 8707882 8708030 -86564621 + B3 SINE B2 1 148 -68 4 651 405 0 0 0 chr17 8708030 8708075 -86564576 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 651 792 285 39 5 chr17 8708075 8708134 -86564517 + B3 SINE B2 149 214 -2 4 651 412 315 70 55 chr17 8708339 8708651 -86564000 + L1MC4 LINE L1 6659 6975 -1067 4 651 509 267 356 0 chr17 8709637 8709911 -86562740 + MTE2b LTR MaLR 1 371 -8 4 651 296 295 135 8 chr17 8710151 8710284 -86562367 - MLT1A1 LTR MaLR -2 406 257 4 651 763 276 163 12 chr17 8711159 8711409 -86561242 + B4A SINE B4 1 288 -4 4 651 261 57 0 0 chr17 8711420 8711455 -86561196 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 651 561 160 140 124 chr17 8711580 8711758 -86560893 - B3A SINE B2 -13 182 2 4 651 534 31 0 0 chr17 8711988 8712052 -86560599 + (GGA)n Simple_repeat Simple_repeat 1 64 0 4 651 250 308 130 45 chr17 8712257 8712434 -86560217 - MLT2B3 LTR ERVL -281 273 82 4 651 488 272 39 50 chr17 8712317 8712499 -86560152 - MTEb LTR MaLR -194 185 6 4 651 2583 177 82 2 chr17 8712581 8713120 -86559531 - Lx4B LINE L1 0 7058 6477 4 651 2973 301 33 8 chr17 8713148 8713936 -86558715 - MTEa-int LTR MaLR -89 1491 684 4 651 1750 237 58 31 chr17 8713936 8714449 -86558202 + RLTR11A2 LTR ERVK 1 527 0 4 651 1378 321 135 12 chr17 8714449 8714801 -86557850 - MTEa-int LTR MaLR -891 689 279 4 651 2347 105 9 12 chr17 8714801 8715129 -86557522 - ORR1A2 LTR MaLR 0 327 1 4 651 1378 321 135 12 chr17 8715129 8715385 -86557266 - MTEa-int LTR MaLR -1302 278 2 4 651 798 287 91 91 chr17 8715385 8715757 -86556894 - MTEa LTR MaLR 0 379 8 4 651 215 321 86 35 chr17 8716210 8716326 -86556325 - L2 LINE L2 -1104 2315 2194 4 651 23 0 0 0 chr17 8718021 8718044 -86554607 + GC_rich Low_complexity Low_complexity 1 23 0 4 651 386 186 12 0 chr17 8718185 8718271 -86554380 + (CA)n Simple_repeat Simple_repeat 1 87 0 4 651 22 0 0 0 chr17 8718688 8718710 -86553941 + AT_rich Low_complexity Low_complexity 1 22 0 4 651 200 86 0 28 chr17 8718745 8718781 -86553870 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 4 651 237 265 0 14 chr17 8718817 8718886 -86553765 + (TG)n Simple_repeat Simple_repeat 1 68 0 4 651 596 14 14 0 chr17 8719567 8719640 -86553011 + (GA)n Simple_repeat Simple_repeat 1 74 0 4 651 224 263 26 13 chr17 8719745 8719822 -86552829 + CT-rich Low_complexity Low_complexity 1 78 0 4 651 354 23 0 0 chr17 8721579 8721622 -86551029 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 651 679 238 68 31 chr17 8723179 8723370 -86549281 + B3A SINE B2 1 198 0 4 651 1525 226 61 28 chr17 8723536 8723928 -86548723 + MTD LTR MaLR 15 419 0 4 651 248 70 0 23 chr17 8725048 8725092 -86547559 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 4 651 254 53 52 17 chr17 8726164 8726222 -86546429 + (TA)n Simple_repeat Simple_repeat 2 61 0 4 651 1052 168 67 16 chr17 8726225 8726418 -86546233 - B3 SINE B2 -6 210 8 4 651 745 224 56 10 chr17 8726798 8726996 -86545655 - B3 SINE B2 -9 207 1 4 651 513 293 18 71 chr17 8727069 8727238 -86545413 + MTEa LTR MaLR 1 160 -219 4 651 180 0 0 0 chr17 8727291 8727311 -86545340 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 4 651 1923 174 58 3 chr17 8727338 8727700 -86544951 + MTD LTR MaLR 24 405 -14 4 651 679 262 7 7 chr17 8727711 8727853 -86544798 - ID_B1 SINE B4 -16 208 67 4 651 360 0 0 0 chr17 8729101 8729141 -86543510 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 651 694 318 62 21 chr17 8729538 8729779 -86542872 + B4A SINE B4 42 292 0 4 651 417 109 0 0 chr17 8729781 8729845 -86542806 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 651 315 113 0 0 chr17 8730017 8730070 -86542581 + (CAA)n Simple_repeat Simple_repeat 2 54 0 4 651 994 63 0 0 chr17 8730751 8730878 -86541773 + B1_Mus1 SINE Alu 2 128 -20 4 651 342 0 0 0 chr17 8730879 8730917 -86541734 + (TAA)n Simple_repeat Simple_repeat 2 39 0 4 651 410 278 69 74 chr17 8731069 8731279 -86541372 - B3A SINE B2 0 216 9 4 651 8655 137 4 14 chr17 8731279 8732676 -86539975 - L1_Mur2 LINE L1 -444 5433 4051 4 651 7461 87 34 8 chr17 8732676 8733705 -86538946 + Lx2 LINE L1 5590 6645 -352 4 651 1263 95 113 15 chr17 8733703 8733793 -86538858 + Lx2 LINE L1 6775 6887 -110 4 651 180 111 0 0 chr17 8733793 8733820 -86538831 + (TGAG)n Simple_repeat Simple_repeat 2 28 0 4 651 1263 95 113 15 chr17 8733820 8733932 -86538719 + Lx2 LINE L1 6888 6997 0 4 651 294 29 0 0 chr17 8734537 8734572 -86538079 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 651 243 0 0 0 chr17 8736089 8736116 -86536535 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 4 651 451 160 11 11 chr17 8737366 8737461 -86535190 + CT-rich Low_complexity Low_complexity 2 96 0 4 651 633 68 0 64 chr17 8737624 8737701 -86534950 + MTC LTR MaLR 1 77 -344 4 651 2413 121 61 16 chr17 8737701 8738078 -86534573 + ORR1B1 LTR MaLR 1 394 0 4 651 633 68 0 64 chr17 8738078 8738094 -86534557 + MTC LTR MaLR 78 88 -333 4 651 283 214 176 12 chr17 8739719 8739804 -86532847 - B4 SINE B4 -193 99 1 4 651 203 369 54 9 chr17 8740113 8740225 -86532426 + L2a LINE L2 3291 3407 -19 4 651 264 212 0 0 chr17 8740953 8741019 -86531632 + (TG)n Simple_repeat Simple_repeat 1 66 0 4 651 630 212 0 0 chr17 8741035 8741195 -86531456 + (TG)n Simple_repeat Simple_repeat 1 160 0 4 651 1507 77 0 5 chr17 8741497 8741692 -86530959 + B2_Mm2 SINE B2 1 194 -1 4 651 444 286 45 90 chr17 8741724 8741924 -86530727 - B3A SINE B2 -5 193 3 4 651 294 29 0 0 chr17 8741937 8741972 -86530679 + (CTTA)n Simple_repeat Simple_repeat 1 35 0 4 651 853 224 73 24 chr17 8741973 8742179 -86530472 - B3 SINE B2 0 216 1 4 651 240 284 14 43 chr17 8742226 8742296 -86530355 - L2a LINE L2 -339 3087 3020 4 651 1308 152 0 63 chr17 8743069 8743308 -86529343 - URR1A DNA MER1_type -2 224 1 4 651 358 262 40 46 chr17 8743611 8743763 -86528888 + L1MC LINE L1 5674 5824 -509 4 651 926 97 28 11 chr17 8744938 8745115 -86527536 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 651 319 262 155 0 chr17 8746220 8746323 -86526328 - ID_B1 SINE B4 -8 216 98 4 651 241 275 103 48 chr17 8747676 8747802 -86524849 - ORR1E LTR MaLR -175 184 52 4 651 438 336 93 22 chr17 8747874 8748142 -86524509 - Tigger9b DNA MER2_type -21 603 317 4 651 2158 136 73 11 chr17 8748202 8748573 -86524078 + ORR1B1 LTR MaLR 1 394 0 4 651 235 365 96 6 chr17 8748889 8749046 -86523605 + MLT2B3 LTR ERVL 322 492 -62 4 651 274 291 93 0 chr17 8749241 8749327 -86523324 + MER63B DNA AcHobo 343 436 0 4 651 369 263 129 82 chr17 8750125 8750295 -86522356 - MIR SINE MIR -68 200 23 4 651 905 211 0 6 chr17 8750335 8750507 -86522144 - B2_Mm2 SINE B2 -23 172 2 4 651 548 234 0 98 chr17 8751256 8751379 -86521272 - B4 SINE B4 -179 113 3 4 651 217 301 0 24 chr17 8752021 8752106 -86520545 - B4 SINE B4 -207 85 3 4 651 1172 237 101 22 chr17 8752794 8753160 -86519491 - BGLII_B LTR ERVK -24 417 23 4 651 550 159 161 80 chr17 8753306 8753443 -86519208 - B1_Mur1 SINE Alu -1 148 1 4 651 198 71 0 0 chr17 8753531 8753559 -86519092 + (TTCC)n Simple_repeat Simple_repeat 3 30 0 4 651 625 234 141 11 chr17 8753563 8753740 -86518911 - B3 SINE B2 -15 201 2 4 651 219 69 0 0 chr17 8753864 8753893 -86518758 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 651 252 0 0 0 chr17 8754033 8754061 -86518590 + (TCTA)n Simple_repeat Simple_repeat 1 28 0 5 651 888 101 62 35 chr17 8754066 8754210 -86518441 - B1_Mur3 SINE Alu 0 149 2 5 651 895 306 16 50 chr17 8755086 8755464 -86517187 - MTE2b LTR MaLR -43 376 3 5 651 203 235 19 56 chr17 8755601 8755655 -86516996 - L2b LINE L2 -1 3374 3323 5 651 198 91 0 0 chr17 8756165 8756198 -86516453 + (CAA)n Simple_repeat Simple_repeat 2 34 0 5 651 728 104 0 17 chr17 8756217 8756334 -86516317 + (TTTC)n Simple_repeat Simple_repeat 4 118 0 5 651 1226 54 0 0 chr17 8756337 8756485 -86516166 - B1_Mus1 SINE Alu 0 148 1 5 651 408 20 0 0 chr17 8758401 8758450 -86514201 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 5 651 225 0 0 0 chr17 8758558 8758583 -86514068 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 5 651 248 259 72 24 chr17 8761716 8761799 -86510852 - Lx7 LINE L1 -1911 5785 5699 5 651 251 207 22 79 chr17 8762247 8762336 -86510315 - RLTR25B LTR ERVK -503 525 442 5 651 623 183 19 0 chr17 8762269 8762373 -86510278 - B1_Mur4 SINE Alu -40 110 5 5 651 225 327 72 9 chr17 8762832 8762943 -86509708 - MIRb SINE MIR -86 182 65 5 651 485 363 77 56 chr17 8763733 8764109 -86508542 + MLT2B3 LTR ERVL 42 425 -129 5 651 541 281 134 19 chr17 8764167 8764392 -86508259 + MLT2B3 LTR ERVL 264 517 -37 5 651 216 0 0 0 chr17 8764392 8764416 -86508235 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 651 541 281 134 19 chr17 8764416 8764451 -86508200 + MLT2B3 LTR ERVL 518 553 -1 5 651 311 322 41 27 chr17 8766211 8766358 -86506293 - L1MD2 LINE L1 -132 6227 6079 5 651 225 172 21 41 chr17 8767169 8767266 -86505385 + (TG)n Simple_repeat Simple_repeat 1 95 0 5 651 420 231 52 23 chr17 8767313 8767486 -86505165 + (TG)n Simple_repeat Simple_repeat 1 178 0 5 651 664 247 100 64 chr17 8768739 8769020 -86503631 + B4A SINE B4 2 292 0 5 651 352 186 9 9 chr17 8769041 8769155 -86503496 + CT-rich Low_complexity Low_complexity 2 115 0 5 651 370 291 154 54 chr17 8769586 8769863 -86502788 + B4 SINE B4 5 276 -16 5 651 298 216 74 74 chr17 8770264 8770359 -86502292 + L1MC1 LINE L1 6232 6326 -7 5 651 477 0 0 0 chr17 8770363 8770416 -86502235 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 651 255 31 0 0 chr17 8770416 8770447 -86502204 + (GA)n Simple_repeat Simple_repeat 2 33 0 5 651 1123 274 102 53 chr17 8772299 8772763 -86499888 + Lx8 LINE L1 6919 7404 -69 5 651 441 0 0 0 chr17 8772763 8772812 -86499839 + (TC)n Simple_repeat Simple_repeat 2 50 0 5 651 1123 274 102 53 chr17 8772812 8772876 -86499775 + Lx8 LINE L1 7405 7473 0 5 651 806 268 33 33 chr17 8773357 8773569 -86499082 - B3 SINE B2 -2 214 3 5 651 439 257 97 0 chr17 8775180 8775324 -86497327 + MER82 DNA MER2_type 94 251 -402 5 651 488 233 63 74 chr17 8775383 8775671 -86496980 + HAL1-2a_MD LINE L1 2345 2521 -503 5 651 198 191 0 0 chr17 8775713 8775760 -86496891 + (CACCAT)n Simple_repeat Simple_repeat 3 49 0 5 651 328 331 17 17 chr17 8776114 8776289 -86496362 + (TATATG)n Simple_repeat Simple_repeat 4 178 0 5 651 291 311 43 91 chr17 8776311 8776541 -86496110 + RLTR21 LTR ERVK 1088 1306 -266 5 651 209 352 12 24 chr17 8776541 8776707 -86495944 + (TATATG)n Simple_repeat Simple_repeat 6 169 0 5 651 227 322 160 72 chr17 8777502 8777696 -86494955 - MIRb SINE MIR -34 234 24 5 651 198 0 0 0 chr17 8778763 8778785 -86493866 + (CTAGG)n Simple_repeat Simple_repeat 1 22 0 5 651 214 347 0 14 chr17 8780660 8780733 -86491918 + MIR SINE MIR 70 141 -67 5 651 271 298 0 12 chr17 8780898 8780983 -86491668 + (TG)n Simple_repeat Simple_repeat 2 85 0 5 81 1239 7 0 0 chr17 8781796 8781936 -86490715 + (GGGAGA)n Simple_repeat Simple_repeat 3 142 0 5 652 838 267 83 33 chr17 8782617 8783128 -86489523 - MTE2a LTR MaLR -36 383 3 5 652 968 83 0 7 chr17 8783247 8783392 -86489259 + (GA)n Simple_repeat Simple_repeat 1 144 0 5 652 227 198 135 77 chr17 8783544 8783714 -86488937 - L2 LINE L2 -420 2999 2820 5 652 392 252 78 0 chr17 8784437 8784540 -86488111 - RMER30 DNA MER1_type -7 195 85 5 652 462 221 9 37 chr17 8786517 8786625 -86486026 - PB1D10 SINE Alu -8 109 5 5 652 941 277 87 46 chr17 8786832 8787177 -86485474 - Lx8 LINE L1 -3 7470 7112 5 652 281 220 0 0 chr17 8787169 8787219 -86485432 - Lx8 LINE L1 -305 7168 7119 5 652 736 313 38 21 chr17 8787600 8787835 -86484816 + MTD LTR MaLR 1 239 -180 5 652 318 274 44 62 chr17 8787982 8788095 -86484556 + MTD LTR MaLR 202 312 -67 5 652 318 319 130 32 chr17 8788277 8788585 -86484066 - L2 LINE L2 -2935 484 147 5 652 444 288 100 58 chr17 8788667 8788907 -86483744 - L1MEg LINE L1 -5181 903 654 5 652 427 280 12 23 chr17 8789605 8789777 -86482874 + (CATA)n Simple_repeat Simple_repeat 2 171 0 5 652 189 0 0 0 chr17 8789894 8789915 -86482736 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 652 363 324 0 22 chr17 8790003 8790186 -86482465 + (TA)n Simple_repeat Simple_repeat 1 179 0 5 652 1361 143 14 0 chr17 8790387 8790610 -86482041 - URR1A DNA MER1_type 0 226 1 5 652 407 141 13 0 chr17 8791541 8791619 -86481032 + GA-rich Low_complexity Low_complexity 3 81 0 5 652 1429 68 17 0 chr17 8791621 8791798 -86480853 + B2_Mm2 SINE B2 2 181 -14 5 652 252 0 0 0 chr17 8791807 8791835 -86480816 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 5 652 2594 74 3 3 chr17 8791835 8792162 -86480489 + ORR1A2 LTR MaLR 1 327 0 5 652 813 241 104 30 chr17 8793360 8793561 -86479090 + B3 SINE B2 1 216 0 5 652 278 180 0 16 chr17 8793866 8793928 -86478723 + CT-rich Low_complexity Low_complexity 2 62 0 5 652 4725 205 41 10 chr17 8793935 8794915 -86477736 - Lx5 LINE L1 -7 7043 6034 5 652 490 308 70 93 chr17 8795378 8795679 -86476972 - MER121 Unknown Unknown -47 365 72 5 652 305 271 248 69 chr17 8796994 8797240 -86475411 - B4 SINE B4 0 292 3 5 652 246 329 73 61 chr17 8797244 8797409 -86475242 - MLT1E2 LTR MaLR -442 185 19 5 652 1808 155 30 3 chr17 8797393 8797691 -86474960 + ORR1B2 LTR MaLR 62 367 0 5 652 747 33 0 0 chr17 8797780 8797870 -86474781 + (TTTC)n Simple_repeat Simple_repeat 2 91 0 5 652 317 358 34 34 chr17 8797871 8798050 -86474601 + MIRb SINE MIR 44 222 -46 5 652 672 191 6 11 chr17 8798448 8798623 -86474028 + CT-rich Low_complexity Low_complexity 3 176 0 5 652 561 59 0 0 chr17 8799238 8799306 -86473345 + Lx2 LINE L1 5710 5777 -1220 5 652 271 213 120 0 chr17 8799391 8799466 -86473185 - RMER17C-int LTR ERVK -280 2958 2875 5 652 468 353 0 0 chr17 8799477 8799633 -86473018 + (CA)n Simple_repeat Simple_repeat 2 157 0 5 652 1156 240 51 54 chr17 8799642 8799973 -86472678 + ORR1E LTR MaLR 24 353 -6 5 652 189 0 0 0 chr17 8800327 8800348 -86472303 + (T)n Simple_repeat Simple_repeat 1 21 0 5 652 240 208 94 94 chr17 8800505 8800611 -86472040 + MTA_Mm LTR MaLR 181 286 -110 5 652 1546 188 112 6 chr17 8800692 8801030 -86471621 + ORR1D1 LTR MaLR 1 374 0 5 652 220 250 0 0 chr17 8803069 8803109 -86469542 + (CG)n Simple_repeat Simple_repeat 2 41 0 5 652 520 257 9 9 chr17 8805252 8805362 -86467289 - ID_B1 SINE B4 -33 191 82 5 652 617 287 87 77 chr17 8805425 8805901 -86466750 + RNERVK23-int LTR ERVK 2582 3500 -4717 5 652 411 256 100 0 chr17 8806210 8806300 -86466351 - ID_B1 SINE B4 -125 99 1 5 652 326 309 28 9 chr17 8807893 8808001 -86464650 + Charlie1 DNA MER1_type 1922 2031 -750 5 652 483 341 86 52 chr17 8808197 8808522 -86464129 + Charlie1 DNA MER1_type 2351 2686 -95 5 652 9920 67 26 3 chr17 8808534 8810512 -86462139 + MusHAL1 LINE L1 5 2025 -1328 5 652 2963 146 2 6 chr17 8810481 8811010 -86461641 + Lx LINE L1 3245 3771 -2115 5 652 7195 132 27 3 chr17 8810998 8812907 -86459744 + Lx LINE L1 4689 6653 -1 5 652 898 256 21 30 chr17 8812936 8813170 -86459481 + B4A SINE B4 2 233 -59 5 652 322 36 11 98 chr17 8814639 8814731 -86457920 + (GGA)n Simple_repeat Simple_repeat 3 86 0 5 652 649 206 73 0 chr17 8815278 8815414 -86457237 - B1_Mur1 SINE Alu -3 146 1 5 652 361 281 185 69 chr17 8816568 8816735 -86455916 + B4A SINE B4 3 216 -76 5 652 1228 68 11 0 chr17 8816735 8816911 -86455740 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 5 652 361 281 185 69 chr17 8816911 8817003 -86455648 + B4A SINE B4 217 292 0 5 652 428 91 0 15 chr17 8817601 8817668 -86454983 + (GGA)n Simple_repeat Simple_repeat 3 68 0 5 652 734 269 22 104 chr17 8817677 8817825 -86454826 - RMER5 LTR ERV1 -17 517 384 5 652 837 255 19 9 chr17 8817825 8818035 -86454616 + B3 SINE B2 1 212 -4 5 652 734 269 22 104 chr17 8818035 8818202 -86454449 - RMER5 LTR ERV1 -151 383 228 5 652 832 167 0 15 chr17 8818200 8818334 -86454317 + B1_Mur3 SINE Alu 7 138 -11 5 652 566 265 58 75 chr17 8818352 8818593 -86454058 - RMER5 LTR ERV1 -297 237 1 5 652 190 254 50 17 chr17 8819116 8819176 -86453475 + MIR SINE MIR 55 116 -92 5 652 309 296 19 88 chr17 8820778 8820937 -86451714 + Charlie7a DNA MER1_type 9 156 -116 5 652 878 319 2 7 chr17 8821511 8821919 -86450732 + G-rich Low_complexity Low_complexity 1 406 0 5 652 522 302 0 0 chr17 8821719 8821898 -86450753 + (ATGGTG)n Simple_repeat Simple_repeat 2 180 0 5 652 205 278 518 9 chr17 8822426 8822536 -86450115 - MIRc SINE MIR -42 226 61 5 652 1127 156 0 11 chr17 8824004 8824192 -86448459 - MTC LTR MaLR -8 413 228 5 652 375 201 4 47 chr17 8824535 8824777 -86447874 + C-rich Low_complexity Low_complexity 1 231 0 5 652 216 222 15 31 chr17 8824780 8824845 -86447806 + CT-rich Low_complexity Low_complexity 4 67 0 5 652 333 205 0 23 chr17 8824848 8824978 -86447673 + C-rich Low_complexity Low_complexity 3 129 0 5 652 396 312 63 21 chr17 8825284 8825474 -86447177 + L1MB7 LINE L1 5975 6172 -12 5 652 391 272 0 12 chr17 8826874 8826956 -86445695 + B4 SINE B4 185 265 -27 5 652 411 56 0 0 chr17 8826971 8827025 -86445626 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 652 330 331 23 0 chr17 8827034 8827164 -86445487 + (CATA)n Simple_repeat Simple_repeat 2 134 0 6 652 446 270 0 6 chr17 8827165 8827344 -86445307 + (CATATA)n Simple_repeat Simple_repeat 2 179 0 6 652 850 218 126 17 chr17 8830162 8830431 -86442220 - L1_Rod LINE L1 -643 5657 5359 6 652 1107 244 9 9 chr17 8830653 8830872 -86441779 + B4 SINE B4 2 220 -72 6 652 537 114 181 0 chr17 8830876 8830981 -86441670 + Lx2 LINE L1 6863 6986 -11 6 652 249 309 0 68 chr17 8831011 8831084 -86441567 + B4 SINE B4 211 278 -14 6 652 1256 87 35 0 chr17 8831766 8831939 -86440712 - B2_Mm1t SINE B2 -14 179 1 6 652 548 280 0 8 chr17 8832015 8832141 -86440510 + B4A SINE B4 149 273 -19 6 652 206 57 0 54 chr17 8832215 8832252 -86440399 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 6 652 860 151 154 16 chr17 8832988 8833176 -86439475 - B3 SINE B2 -1 215 2 6 652 234 0 0 0 chr17 8835004 8835030 -86437621 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 652 6078 207 45 21 chr17 8836058 8837323 -86435328 + Lx7 LINE L1 6359 7653 -43 6 652 558 63 0 0 chr17 8838737 8838816 -86433835 + (CA)n Simple_repeat Simple_repeat 1 79 0 6 652 198 128 0 0 chr17 8838870 8838909 -86433742 + (CAGA)n Simple_repeat Simple_repeat 4 42 0 6 652 294 226 18 27 chr17 8838913 8839003 -86433648 - L1_Rod LINE L1 -272 5884 5721 6 652 242 196 36 0 chr17 8841533 8841589 -86431062 + B1F2 SINE Alu 1 58 -91 6 652 21 0 0 0 chr17 8841596 8841617 -86431034 + GC_rich Low_complexity Low_complexity 1 21 0 6 652 626 271 12 18 chr17 8842591 8842760 -86429891 - MTE2a LTR MaLR -5 374 207 6 652 643 282 81 84 chr17 8842767 8843126 -86429525 - MTE2a LTR MaLR 0 379 22 6 652 999 236 15 25 chr17 8843103 8843303 -86429348 - MTE2b LTR MaLR -175 204 7 6 652 183 319 0 0 chr17 8845520 8845567 -86427084 - L3 LINE CR1 -2033 2456 2410 6 652 3327 148 27 25 chr17 8848401 8848963 -86423688 + RLTR12A LTR ERVK 2 564 -4 6 652 207 0 0 0 chr17 8849689 8849712 -86422939 + (A)n Simple_repeat Simple_repeat 1 23 0 6 652 210 156 0 0 chr17 8850834 8850879 -86421772 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 652 687 219 21 28 chr17 8851126 8851267 -86421384 + B1_Mur2 SINE Alu 10 149 0 6 652 351 65 0 0 chr17 8851273 8851319 -86421332 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 6 652 298 284 72 30 chr17 8852790 8852957 -86419694 + L1MA6 LINE L1 5413 5586 -714 6 652 592 235 55 136 chr17 8852958 8853258 -86419393 + MTE2a LTR MaLR 85 365 -14 6 652 582 272 121 85 chr17 8853293 8853830 -86418821 + L1MA6 LINE L1 5749 6299 -1 6 652 474 18 0 0 chr17 8854856 8854911 -86417740 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 652 1011 158 3 0 chr17 8855696 8855980 -86416671 + CT-rich Low_complexity Low_complexity 1 284 0 6 652 405 219 35 78 chr17 8855981 8856104 -86416547 - PB1D9 SINE Alu -7 113 1 6 652 273 278 0 4 chr17 8856815 8857075 -86415576 + (CA)n Simple_repeat Simple_repeat 1 258 0 6 652 338 25 0 0 chr17 8857127 8857167 -86415484 + HAL1-3A_ME LINE L1 1977 2016 -842 6 652 1818 206 63 44 chr17 8857680 8857920 -86414731 + MTD LTR MaLR 1 240 -179 6 652 2545 135 47 10 chr17 8857920 8858325 -86414326 - MTC LTR MaLR -1 420 1 6 652 1818 206 63 44 chr17 8858325 8858495 -86414156 + MTD LTR MaLR 241 419 0 6 652 558 43 0 0 chr17 8858772 8858841 -86413810 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 6 652 351 0 0 0 chr17 8859449 8859488 -86413163 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 652 333 0 0 0 chr17 8860395 8860432 -86412219 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 652 290 383 0 11 chr17 8860436 8860618 -86412033 + (TGAG)n Simple_repeat Simple_repeat 1 180 0 6 652 701 206 44 7 chr17 8862356 8862493 -86410158 - B1_Mur1 SINE Alu -5 144 3 6 652 305 269 55 25 chr17 8862714 8862874 -86409777 - RSINE1 SINE B4 -120 172 4 6 652 230 176 0 19 chr17 8862877 8862929 -86409722 - L1MC2 LINE L1 -17 6327 6277 6 652 1019 323 79 14 chr17 8863022 8863699 -86408952 - L1MC3 LINE L1 -221 6123 5385 6 652 225 94 0 0 chr17 8865666 8865698 -86406953 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 6 652 1497 59 15 10 chr17 8865698 8865904 -86406747 - L1Md_F2 LINE L1 -2 6580 6374 6 652 4772 55 13 0 chr17 8865904 8866592 -86406059 + L1Md_F2 LINE L1 5487 6182 -400 6 652 210 250 0 42 chr17 8866755 8866826 -86405825 + CT-rich Low_complexity Low_complexity 6 73 0 6 652 2766 193 19 46 chr17 8866829 8867398 -86405253 - Lx2B LINE L1 0 7000 6447 6 652 305 307 0 10 chr17 8867399 8867501 -86405150 + CT-rich Low_complexity Low_complexity 1 101 0 6 652 513 0 0 0 chr17 8868022 8868079 -86404572 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 652 243 0 0 0 chr17 8868087 8868114 -86404537 + (GA)n Simple_repeat Simple_repeat 1 27 0 6 652 28 0 0 0 chr17 8869308 8869336 -86403315 + AT_rich Low_complexity Low_complexity 1 28 0 6 652 576 162 0 0 chr17 8869369 8869474 -86403177 + (TA)n Simple_repeat Simple_repeat 1 105 0 6 652 635 294 68 99 chr17 8870060 8870475 -86402176 - RLTR12B LTR ERVK -115 413 12 6 652 451 292 100 61 chr17 8871058 8871352 -86401299 + B4 SINE B4 4 274 -18 6 652 294 226 28 0 chr17 8871363 8871469 -86401182 + (CA)n Simple_repeat Simple_repeat 2 110 0 6 652 797 238 8 106 chr17 8871547 8871782 -86400869 - B3 SINE B2 0 216 5 6 652 3286 148 13 2 chr17 8871836 8872359 -86400292 - Lx5 LINE L1 -928 6122 5594 6 652 2566 123 20 0 chr17 8872352 8872742 -86399909 - Lx5 LINE L1 -604 5273 4876 6 652 261 0 0 0 chr17 8873145 8873174 -86399477 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 652 376 184 193 0 chr17 8873187 8873296 -86399355 - Lx3C LINE L1 -9 6967 6838 6 652 306 279 161 116 chr17 8873821 8874182 -86398469 - MLT1D LTR MaLR -108 397 21 6 652 30 0 0 0 chr17 8874988 8875018 -86397633 + AT_rich Low_complexity Low_complexity 1 30 0 6 652 4466 202 16 133 chr17 8875187 8876392 -86396259 - RMER1B Other Other -1 1065 2 6 652 324 0 0 0 chr17 8878867 8878903 -86393748 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 652 503 187 103 0 chr17 8878932 8879039 -86393612 - RSINE1 SINE B4 -36 129 12 6 652 326 218 115 0 chr17 8880094 8880172 -86392479 - L1M5 LINE L1 -2927 3219 3133 6 652 460 253 0 0 chr17 8881892 8881987 -86390664 - ORR1E LTR MaLR -264 95 1 6 652 403 206 0 72 chr17 8882211 8882405 -86390246 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 6 652 369 0 0 0 chr17 8882699 8882740 -86389911 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 652 576 252 0 16 chr17 8882764 8882893 -86389758 - B4A SINE B4 -49 243 117 6 652 276 289 94 72 chr17 8883017 8883155 -86389496 - MER3 DNA MER1_type -1 208 68 6 652 369 306 12 100 chr17 8883436 8883676 -86388975 + RMER12 LTR ERVK 767 985 -337 6 652 340 321 181 22 chr17 8884003 8884508 -86388143 + L1MB7 LINE L1 4963 5547 -627 6 652 248 265 59 24 chr17 8884513 8884598 -86388053 - MTEa LTR MaLR -4 375 288 6 652 367 290 151 9 chr17 8884855 8885199 -86387452 + L1MB7 LINE L1 5573 5965 -219 6 652 2050 92 3 77 chr17 8885206 8885558 -86387093 - IAPLTR1a_Mm LTR ERVK -11 326 1 6 652 27249 11 1 0 chr17 8885558 8888513 -86384138 - IAPEz-int LTR ERVK 0 6481 3525 6 652 953 80 24 0 chr17 8888513 8888638 -86384013 - IAPEz-int LTR ERVK -2770 4910 4783 6 652 1868 111 4 4 chr17 8888633 8888895 -86383756 - IAPEz-int LTR ERVK -5183 2497 2236 6 652 464 78 0 30 chr17 8888881 8888947 -86383704 - IAPEz-int LTR ERVK -5059 1422 1359 6 652 4688 35 37 0 chr17 8888979 8889549 -86383102 - IAPEz-int LTR ERVK -5890 591 1 6 652 1896 105 3 69 chr17 8889550 8889899 -86382752 - IAPLTR1a_Mm LTR ERVK -11 326 1 6 652 1216 200 171 22 chr17 8889947 8890269 -86382382 - ORR1D1 LTR MaLR -4 370 1 6 652 741 135 115 0 chr17 8890269 8890417 -86382234 - ORR1D1-int LTR MaLR 0 1370 1206 6 652 1111 220 145 104 chr17 8890449 8890521 -86382130 - MT2A LTR ERVL -13 520 463 6 652 300 27 0 0 chr17 8890521 8890558 -86382093 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 652 1111 220 145 104 chr17 8890558 8890983 -86381668 - MT2A LTR ERVL -71 462 3 6 652 2224 260 29 5 chr17 8890985 8891177 -86381474 - ORR1D1-int LTR MaLR -161 1209 1013 6 652 405 0 0 0 chr17 8891177 8891222 -86381429 + (TCC)n Simple_repeat Simple_repeat 2 46 0 6 652 2224 260 29 5 chr17 8891222 8891625 -86381026 - ORR1D1-int LTR MaLR -358 1012 600 6 652 1364 173 82 14 chr17 8891631 8891924 -86380727 - ORR1D1-int LTR MaLR -1055 315 3 6 652 1419 175 105 24 chr17 8891924 8892254 -86380397 - ORR1D1 LTR MaLR -13 361 5 6 652 291 187 90 39 chr17 8892295 8892373 -86380278 + L1MB7 LINE L1 6069 6150 -34 6 652 805 347 90 37 chr17 8892407 8892549 -86380102 - Lx9 LINE L1 -1 7472 7318 6 652 330 26 0 0 chr17 8892549 8892588 -86380063 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 652 965 317 59 51 chr17 8892588 8893106 -86379545 - Lx9 LINE L1 -217 7427 6792 6 652 189 237 0 0 chr17 8893107 8893166 -86379485 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 6 652 1210 54 0 0 chr17 8893261 8893408 -86379243 + B1_Mm SINE Alu 1 147 0 6 652 276 333 1 115 chr17 8894499 8894631 -86378020 + B3A SINE B2 81 201 -15 6 652 212 171 24 0 chr17 8894637 8894678 -86377973 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 652 515 197 5 38 chr17 8894689 8894874 -86377777 + (CA)n Simple_repeat Simple_repeat 2 180 0 6 652 810 280 90 11 chr17 8894993 8895260 -86377391 + B4 SINE B4 1 288 -4 6 652 199 227 0 120 chr17 8895889 8895964 -86376687 + MIRb SINE MIR 121 186 -82 6 652 291 184 0 0 chr17 8896320 8896407 -86376244 + (TG)n Simple_repeat Simple_repeat 2 88 0 6 652 330 26 0 0 chr17 8896681 8896720 -86375931 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 652 1118 254 58 3 chr17 8896742 8897054 -86375597 - ORR1D2 LTR MaLR -1 369 41 6 652 264 186 156 73 chr17 8897118 8897286 -86375365 - L1_Mur1 LINE L1 -6562 420 287 6 652 289 203 128 68 chr17 8897327 8897475 -86375176 - L1_Mur1 LINE L1 -6552 430 274 6 652 779 169 44 0 chr17 8897769 8897905 -86374746 + B1_Mur2 SINE Alu 2 143 -6 6 652 2715 137 2 0 chr17 8898275 8898668 -86373983 - ORR1B1 LTR MaLR 0 394 1 6 652 776 283 37 9 chr17 8899113 8899327 -86373324 + ID_B1 SINE B4 4 223 -1 6 652 433 286 123 28 chr17 8900117 8900369 -86372282 + B4A SINE B4 1 276 -16 6 652 2195 96 35 13 chr17 8900535 8900853 -86371798 - ORR1A2 LTR MaLR -2 325 1 6 652 7918 141 83 25 chr17 8900853 8902475 -86370176 - ORR1A2-int LTR MaLR 0 1963 248 6 652 449 103 0 0 chr17 8902455 8902523 -86370128 - ORR1A2-int LTR MaLR -1724 68 1 6 652 2065 94 10 10 chr17 8902525 8902836 -86369815 - ORR1A2 LTR MaLR -16 311 1 6 652 22 56 0 0 chr17 8904317 8904353 -86368298 + AT_rich Low_complexity Low_complexity 1 36 0 6 652 7316 98 35 3 chr17 8904353 8905716 -86366935 - Lx LINE L1 -7 6647 5244 6 652 640 175 31 8 chr17 8905723 8905850 -86366801 - B3 SINE B2 -6 210 81 6 652 812 83 0 0 chr17 8905845 8905966 -86366685 + B1_Mus1 SINE Alu 28 148 0 6 652 269 140 20 0 chr17 8906025 8906075 -86366576 - B3 SINE B2 -165 51 1 6 652 648 234 21 0 chr17 8906098 8906243 -86366408 - B1F2 SINE Alu 0 149 2 6 652 38103 20 1 7 chr17 8906853 8911900 -86360751 + L1Md_T LINE L1 578 5586 -297 7 652 8723 27 1 0 chr17 8911900 8912895 -86359756 + L1Md_T LINE L1 5587 6582 0 7 653 502 261 171 29 chr17 8912998 8913168 -86359483 - B3A SINE B2 0 198 5 7 653 872 148 7 0 chr17 8913181 8913336 -86359315 + CT-rich Low_complexity Low_complexity 1 156 0 7 653 736 236 0 0 chr17 8913336 8913480 -86359171 - B1_Mur2 SINE Alu -1 148 5 7 653 468 267 0 0 chr17 8914831 8915011 -86357640 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 653 191 253 0 24 chr17 8914999 8915084 -86357567 + (CATATA)n Simple_repeat Simple_repeat 3 85 0 7 653 327 306 16 8 chr17 8915098 8915220 -86357431 + (CATA)n Simple_repeat Simple_repeat 4 126 0 7 653 866 252 19 0 chr17 8915221 8915427 -86357224 - B3 SINE B2 -3 213 4 7 653 216 209 23 0 chr17 8915440 8915483 -86357168 + CT-rich Low_complexity Low_complexity 2 45 0 7 653 567 198 17 17 chr17 8915501 8915619 -86357032 - PB1D9 SINE Alu -2 118 1 7 653 619 250 8 8 chr17 8915736 8915869 -86356782 + RSINE1 SINE B4 9 141 -24 7 653 240 35 0 0 chr17 8915895 8915924 -86356727 + (CACCAT)n Simple_repeat Simple_repeat 4 32 0 7 653 712 241 205 26 chr17 8916509 8916847 -86355804 - ORR1E LTR MaLR 0 370 3 7 653 257 312 12 59 chr17 8917158 8917243 -86355408 - ID4 SINE ID -2 81 1 7 653 744 188 45 45 chr17 8917878 8918056 -86354595 - MTEa LTR MaLR -40 339 162 7 653 347 195 12 83 chr17 8918179 8918263 -86354388 - MTEa LTR MaLR -201 178 101 7 653 412 280 0 36 chr17 8918285 8918396 -86354255 - MTEa LTR MaLR -253 126 20 7 653 987 244 97 30 chr17 8918494 8918794 -86353857 - MTE2b LTR MaLR 0 379 60 7 653 271 306 0 0 chr17 8918797 8918869 -86353782 - MTE2b LTR MaLR -292 87 16 7 653 1491 218 16 55 chr17 8919319 8919702 -86352949 + ORR1D2 LTR MaLR 1 368 -2 7 653 264 30 0 0 chr17 8919786 8919819 -86352832 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 653 22 35 0 0 chr17 8920066 8920095 -86352556 + AT_rich Low_complexity Low_complexity 1 29 0 7 653 191 324 14 27 chr17 8921983 8922056 -86350595 + MIRb SINE MIR 125 196 -72 7 653 22 35 0 0 chr17 8922194 8922223 -86350428 + AT_rich Low_complexity Low_complexity 1 29 0 7 653 2334 94 22 3 chr17 8923093 8923413 -86349238 - Lx LINE L1 -6 6648 6323 7 653 180 0 0 0 chr17 8924094 8924114 -86348537 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 7 653 4496 198 68 17 chr17 8924465 8925385 -86347266 - Lx6 LINE L1 -11 7449 6483 7 653 717 137 0 0 chr17 8925482 8925599 -86347052 + (CA)n Simple_repeat Simple_repeat 2 118 0 7 653 278 299 0 0 chr17 8925705 8925772 -86346879 + (TG)n Simple_repeat Simple_repeat 1 67 0 7 653 676 292 53 19 chr17 8925789 8926051 -86346600 - B4A SINE B4 -18 274 4 7 653 215 196 39 0 chr17 8926836 8926887 -86345764 + GA-rich Low_complexity Low_complexity 2 54 0 7 653 675 230 34 22 chr17 8927165 8927343 -86345308 + B3A SINE B2 15 194 -4 7 653 213 225 0 0 chr17 8927646 8927686 -86344965 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 653 204 40 0 0 chr17 8927907 8927932 -86344719 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 7 653 423 0 0 0 chr17 8928265 8928312 -86344339 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 653 1989 187 99 17 chr17 8928320 8928803 -86343848 - RMER5 LTR ERV1 -11 523 1 7 653 882 54 0 0 chr17 8929513 8929625 -86343026 + (GAAA)n Simple_repeat Simple_repeat 2 113 0 7 653 646 319 0 11 chr17 8929704 8930060 -86342591 + GA-rich Low_complexity Low_complexity 1 352 0 7 653 212 291 0 0 chr17 8930627 8930682 -86341969 + (CAGG)n Simple_repeat Simple_repeat 2 56 0 7 653 639 304 12 24 chr17 8931329 8931494 -86341157 + RSINE1 SINE B4 2 164 -1 7 653 234 0 0 0 chr17 8931525 8931551 -86341100 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 653 22 0 0 0 chr17 8931734 8931756 -86340895 + AT_rich Low_complexity Low_complexity 1 22 0 7 653 319 202 50 12 chr17 8932443 8932523 -86340128 + B3 SINE B2 1 83 -133 7 653 770 182 30 18 chr17 8932524 8932692 -86339959 - Lx9 LINE L1 -240 7404 7235 7 653 251 209 104 0 chr17 8933513 8933580 -86339071 - L1MA9 LINE L1 -41 6271 6198 7 653 317 274 43 50 chr17 8933584 8933756 -86338895 - MTEa LTR MaLR -5 374 157 7 653 333 296 9 0 chr17 8934195 8934310 -86338341 + MLT2B4 LTR ERVL 3 118 -438 7 653 21 0 0 0 chr17 8934844 8934865 -86337786 + AT_rich Low_complexity Low_complexity 1 21 0 7 653 357 24 0 0 chr17 8936026 8936068 -86336583 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 653 620 183 7 0 chr17 8937484 8937626 -86335025 + (TA)n Simple_repeat Simple_repeat 2 144 0 7 653 1021 208 56 0 chr17 8938088 8938285 -86334366 + B3 SINE B2 4 211 -5 7 653 231 220 34 0 chr17 8942753 8942812 -86329839 + B4 SINE B4 54 114 -178 7 653 183 162 0 0 chr17 8942947 8942984 -86329667 + CT-rich Low_complexity Low_complexity 2 38 0 7 653 543 69 0 0 chr17 8942984 8943056 -86329595 + (CA)n Simple_repeat Simple_repeat 1 72 0 7 653 25 0 0 0 chr17 8943093 8943118 -86329533 + AT_rich Low_complexity Low_complexity 1 25 0 7 653 333 0 0 0 chr17 8944413 8944450 -86328201 + (A)n Simple_repeat Simple_repeat 1 37 0 7 653 1049 78 7 0 chr17 8944498 8944651 -86328000 + (TCC)n Simple_repeat Simple_repeat 1 154 0 7 653 213 167 24 0 chr17 8944867 8944909 -86327742 + (TA)n Simple_repeat Simple_repeat 1 43 0 7 653 976 225 34 0 chr17 8945049 8945258 -86327393 + B3 SINE B2 1 216 0 7 653 478 296 111 30 chr17 8945265 8945634 -86327017 + L1MB3 LINE L1 5713 6111 -72 7 653 234 309 15 0 chr17 8946412 8946480 -86326171 + (TG)n Simple_repeat Simple_repeat 2 70 0 7 653 415 282 89 30 chr17 8946910 8947078 -86325573 + RMER20B LTR ERVK 189 366 -261 7 653 426 39 0 0 chr17 8947101 8947153 -86325498 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 653 239 227 206 56 chr17 8947154 8947280 -86325371 + RMER20B LTR ERVK 463 607 -20 7 653 363 44 0 0 chr17 8947769 8947814 -86324837 + (CATA)n Simple_repeat Simple_repeat 2 46 0 7 653 469 289 148 43 chr17 8950460 8950670 -86321981 - RMER15 LTR ERVL -48 527 296 7 653 701 85 0 9 chr17 8951547 8951654 -86320997 + (GGA)n Simple_repeat Simple_repeat 2 107 0 7 653 315 359 39 15 chr17 8951924 8952054 -86320597 - B1F SINE Alu -8 141 9 7 653 712 306 17 0 chr17 8951958 8952131 -86320520 - ID_B1 SINE B4 -39 185 10 7 653 959 232 54 108 chr17 8952848 8953162 -86319489 + MTE2a LTR MaLR 8 304 -75 7 653 195 139 0 0 chr17 8953394 8953430 -86319221 + (TCTCCC)n Simple_repeat Simple_repeat 5 40 0 7 653 210 171 0 0 chr17 8953500 8953535 -86319116 + T-rich Low_complexity Low_complexity 1 35 0 7 653 354 274 52 26 chr17 8953594 8953710 -86318941 + MTE2b LTR MaLR 1 119 -300 7 653 610 243 11 0 chr17 8953710 8953887 -86318764 + CT-rich Low_complexity Low_complexity 1 179 0 7 653 564 0 74 0 chr17 8953907 8953988 -86318663 + (TTCCC)n Simple_repeat Simple_repeat 2 88 0 7 653 342 0 0 0 chr17 8953988 8954026 -86318625 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 7 653 605 215 29 7 chr17 8954026 8954162 -86318489 - B1F2 SINE Alu -10 139 1 7 653 785 275 132 41 chr17 8954162 8954428 -86318223 + MTE2b LTR MaLR 76 365 -14 7 653 214 29 28 28 chr17 8954829 8954865 -86317786 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 653 2170 126 6 15 chr17 8955338 8955668 -86316983 + ORR1A2 LTR MaLR 1 327 0 7 653 1628 211 72 14 chr17 8955692 8956039 -86316612 + ORR1D2 LTR MaLR 4 370 0 7 653 2235 109 16 0 chr17 8956940 8957260 -86315391 - ORR1A2 LTR MaLR 0 327 3 7 653 1350 119 48 27 chr17 8957550 8957794 -86314857 - ORR1B1 LTR MaLR -175 219 1 7 653 589 258 116 83 chr17 8957893 8958134 -86314517 - MTEa LTR MaLR -2 377 129 7 653 234 234 74 49 chr17 8958806 8958887 -86313764 - MT2A LTR ERVL -388 145 63 7 653 346 167 95 27 chr17 8958817 8958891 -86313760 - MTEa LTR MaLR -242 137 59 7 653 321 279 21 41 chr17 8958894 8958991 -86313660 - MTEa LTR MaLR -282 97 3 7 653 620 249 86 120 chr17 8959257 8959693 -86312958 - RMER20B LTR ERVK -13 614 220 7 653 328 338 0 14 chr17 8960762 8960900 -86311751 + (CATA)n Simple_repeat Simple_repeat 4 139 0 7 653 494 324 43 59 chr17 8961494 8961750 -86310901 - Tigger7 DNA MER2_type -1874 617 366 7 653 1025 275 31 92 chr17 8961774 8962134 -86310517 - Tigger7 DNA MER2_type -2116 375 38 7 653 186 43 0 0 chr17 8962494 8962517 -86310134 + (TTG)n Simple_repeat Simple_repeat 2 24 0 7 653 280 239 42 0 chr17 8962517 8962588 -86310063 - L1M4b LINE L1 -3686 3320 3247 7 653 354 223 101 5 chr17 8962592 8962757 -86309894 - L1M4b LINE L1 -4006 3096 2909 7 653 180 0 0 0 chr17 8963626 8963646 -86309005 + (T)n Simple_repeat Simple_repeat 1 20 0 7 653 261 183 0 32 chr17 8963646 8963708 -86308943 - L1MB2 LINE L1 -267 5904 5845 7 653 362 244 138 19 chr17 8963717 8963876 -86308775 - L1M4b LINE L1 -4865 2469 2292 7 653 342 0 0 0 chr17 8964170 8964208 -86308443 + (TTG)n Simple_repeat Simple_repeat 2 39 0 7 653 710 172 23 0 chr17 8964210 8964338 -86308313 - B1_Mur3 SINE Alu -18 131 1 7 653 266 209 22 21 chr17 8964424 8964522 -86308129 - L1M4b LINE L1 -5186 1823 1734 7 653 651 297 80 48 chr17 8964604 8964855 -86307796 - B4A SINE B4 0 292 34 7 653 271 250 16 0 chr17 8964877 8964941 -86307710 + B4 SINE B4 6 70 -222 7 653 491 300 125 66 chr17 8964941 8965534 -86307117 - L1M4b LINE L1 -5780 1554 927 7 653 334 364 73 37 chr17 8965564 8965755 -86306896 - L1M4b LINE L1 -6736 598 401 7 653 696 148 0 0 chr17 8965787 8965909 -86306742 + (TG)n Simple_repeat Simple_repeat 2 123 0 7 653 470 257 78 7 chr17 8966320 8966473 -86306178 - L1M4b LINE L1 -7160 174 11 7 653 189 336 37 46 chr17 8966893 8967002 -86305649 - MIR3 SINE MIR -8 200 93 7 653 491 323 81 25 chr17 8967097 8967332 -86305319 + ORR1E LTR MaLR 1 248 -111 7 653 321 320 31 10 chr17 8967576 8967674 -86304977 + ORR1E LTR MaLR 275 374 -5 7 653 258 156 0 0 chr17 8968372 8968436 -86304215 + A-rich Low_complexity Low_complexity 1 64 0 7 653 23 0 0 0 chr17 8969229 8969252 -86303399 + AT_rich Low_complexity Low_complexity 1 23 0 7 653 393 229 17 12 chr17 8969494 8969666 -86302985 + (TATG)n Simple_repeat Simple_repeat 3 175 0 7 653 515 262 0 7 chr17 8969714 8969997 -86302654 + (TG)n Simple_repeat Simple_repeat 1 280 0 7 653 306 279 109 42 chr17 8970003 8970168 -86302483 - MLT2B4 LTR ERVL -36 520 345 7 653 521 329 30 24 chr17 8970150 8970318 -86302333 - MLT2B4 LTR ERVL -387 169 1 7 653 306 270 216 0 chr17 8970919 8971030 -86301621 + Tigger7 DNA MER2_type 2355 2489 -2 7 653 190 267 217 0 chr17 8971043 8971103 -86301548 - MIRb SINE MIR -19 249 177 8 653 472 203 0 31 chr17 8971133 8971391 -86301260 + (TA)n Simple_repeat Simple_repeat 1 249 0 8 653 204 245 0 0 chr17 8971409 8971462 -86301189 + (TA)n Simple_repeat Simple_repeat 2 54 0 8 653 423 68 0 0 chr17 8971815 8971874 -86300777 + (GA)n Simple_repeat Simple_repeat 1 59 0 8 653 370 339 0 23 chr17 8972334 8972464 -86300187 + (CA)n Simple_repeat Simple_repeat 2 128 0 8 653 191 238 184 35 chr17 8973478 8973565 -86299086 - L2a LINE L2 -37 3389 3290 8 653 821 296 88 23 chr17 8973823 8974166 -86298485 - MLT1A0 LTR MaLR 0 365 1 8 653 287 349 9 36 chr17 8974736 8974846 -86297805 + B4A SINE B4 2 108 -184 8 653 305 344 79 37 chr17 8975044 8975234 -86297417 - B4A SINE B4 0 292 95 8 653 229 200 21 72 chr17 8975261 8975358 -86297293 - Lx7 LINE L1 -17 7679 7588 8 653 824 178 70 45 chr17 8975409 8975609 -86297042 - Lx7 LINE L1 -334 7362 7158 8 653 1006 144 178 1 chr17 8975610 8975846 -86296805 + ORR1A4 LTR MaLR 1 309 -58 8 653 1896 176 39 16 chr17 8975846 8976210 -86296441 - L1_Mur3 LINE L1 -613 5267 4896 8 653 705 306 12 73 chr17 8976410 8976657 -86295994 + B4A SINE B4 43 274 -18 8 653 507 123 0 0 chr17 8976693 8976774 -86295877 + (CA)n Simple_repeat Simple_repeat 2 82 0 8 653 195 184 0 0 chr17 8976810 8976848 -86295803 + (CA)n Simple_repeat Simple_repeat 2 39 0 8 653 225 209 156 44 chr17 8978633 8978723 -86293928 + MER67D LTR ERV1 148 247 -267 8 653 222 374 0 0 chr17 8979353 8979468 -86293183 + (CATATA)n Simple_repeat Simple_repeat 1 115 0 8 653 1749 136 117 31 chr17 8979490 8979816 -86292835 + ORR1B1 LTR MaLR 41 394 0 8 653 204 257 0 0 chr17 8979816 8979886 -86292765 + (CATA)n Simple_repeat Simple_repeat 2 71 0 8 653 288 77 0 0 chr17 8979973 8980012 -86292639 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 653 235 279 179 0 chr17 8980027 8980167 -86292484 - RLTR22_Mur LTR ERVK -385 1463 1299 8 653 322 297 98 75 chr17 8980205 8980471 -86292180 - MLT2C2 LTR ERVL -138 326 55 8 653 185 154 0 25 chr17 8980994 8981034 -86291617 + CT-rich Low_complexity Low_complexity 3 41 0 8 653 188 215 169 0 chr17 8981142 8981207 -86291444 - MIRb SINE MIR -13 255 180 8 653 26 50 0 0 chr17 8981579 8981619 -86291032 + AT_rich Low_complexity Low_complexity 1 40 0 8 653 478 167 19 103 chr17 8981625 8981732 -86290919 + B1_Mur2 SINE Alu 47 144 -5 8 653 280 243 27 41 chr17 8981900 8981973 -86290678 + ID4_ SINE ID 2 73 -10 8 653 856 91 17 28 chr17 8981973 8982154 -86290497 + (TG)n Simple_repeat Simple_repeat 2 180 0 8 653 425 76 38 12 chr17 8982166 8982246 -86290405 + (TG)n Simple_repeat Simple_repeat 1 82 0 8 653 207 0 0 0 chr17 8982256 8982279 -86290372 + (CAGA)n Simple_repeat Simple_repeat 2 24 0 8 653 218 100 38 57 chr17 8982881 8982934 -86289717 + A-rich Low_complexity Low_complexity 2 53 0 8 653 585 42 0 0 chr17 8983360 8983432 -86289219 + (GA)n Simple_repeat Simple_repeat 1 72 0 8 653 419 227 89 39 chr17 8984248 8984427 -86288224 + L1MB3 LINE L1 5996 6183 0 8 653 34 65 0 0 chr17 8986854 8986916 -86285735 + AT_rich Low_complexity Low_complexity 1 62 0 8 653 2621 269 56 71 chr17 8986940 8987088 -86285563 - RCHARR1 DNA MER1_type -30 944 788 8 653 1141 62 7 7 chr17 8987088 8987234 -86285417 + B1_Mm SINE Alu 1 146 -1 8 653 2621 269 56 71 chr17 8987234 8988043 -86284608 - RCHARR1 DNA MER1_type -187 787 1 8 653 547 133 8 8 chr17 8988140 8988269 -86284382 + (TC)n Simple_repeat Simple_repeat 2 130 0 8 653 249 187 13 26 chr17 8988322 8988399 -86284252 + CT-rich Low_complexity Low_complexity 1 76 0 8 653 219 338 70 0 chr17 8988921 8988992 -86283659 + RSINE1 SINE B4 3 78 -87 8 653 584 27 14 0 chr17 8989073 8989147 -86283504 + (TAAA)n Simple_repeat Simple_repeat 3 77 0 8 653 409 14 71 0 chr17 8990150 8990220 -86282431 + (CCCCCT)n Simple_repeat Simple_repeat 1 75 0 8 653 318 275 0 35 chr17 8994407 8994520 -86278131 + CT-rich Low_complexity Low_complexity 2 110 0 8 653 206 164 0 18 chr17 8994544 8994600 -86278051 + (CGG)n Simple_repeat Simple_repeat 3 57 0 8 653 209 159 0 22 chr17 8994653 8994698 -86277953 + (CGG)n Simple_repeat Simple_repeat 3 46 0 8 653 288 175 0 0 chr17 8998427 8998490 -86274161 + (TG)n Simple_repeat Simple_repeat 1 63 0 8 653 315 0 0 0 chr17 9001034 9001069 -86271582 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1 653 247 238 48 153 chr17 9003231 9003355 -86269296 - PB1D10 SINE Alu 0 117 7 2 653 207 0 0 0 chr17 9003558 9003581 -86269070 + (T)n Simple_repeat Simple_repeat 1 23 0 3 653 309 317 169 52 chr17 9003637 9003904 -86268747 + L1M5 LINE L1 4733 5045 -1101 4 653 459 0 0 0 chr17 9003904 9003955 -86268696 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 5 653 309 317 169 52 chr17 9003955 9004053 -86268598 + L1M5 LINE L1 5046 5141 -1005 4 653 296 313 36 27 chr17 9004366 9004513 -86268138 + L1M5 LINE L1 5514 5655 -2227 4 653 255 61 0 0 chr17 9006317 9006350 -86266301 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 653 682 219 13 20 chr17 9007951 9008100 -86264551 - B1_Mur2 SINE Alu 0 149 2 7 653 474 18 0 0 chr17 9008193 9008248 -86264403 + (TG)n Simple_repeat Simple_repeat 1 55 0 8 653 470 61 15 0 chr17 9008248 9008314 -86264337 + (GA)n Simple_repeat Simple_repeat 2 68 0 9 653 509 185 72 27 chr17 9009524 9009635 -86263016 + B1F2 SINE Alu 34 149 0 1 653 203 195 24 0 chr17 9009643 9009684 -86262967 + A-rich Low_complexity Low_complexity 4 45 0 1 653 1550 32 27 0 chr17 9009912 9010097 -86262554 - B2_Mm1a SINE B2 -3 190 1 1 653 27 0 0 0 chr17 9010117 9010144 -86262507 + AT_rich Low_complexity Low_complexity 1 27 0 1 653 363 115 324 63 chr17 9010144 9010255 -86262396 - B2_Mm2 SINE B2 -9 186 47 1 653 1314 85 11 0 chr17 9010287 9010463 -86262188 - B2_Mm1t SINE B2 -14 179 2 1 653 295 283 69 50 chr17 9010909 9011069 -86261582 - L1MA7 LINE L1 -39 6252 6090 1 653 238 361 73 29 chr17 9011220 9011357 -86261294 + Charlie2a DNA MER1_type 171 313 -2548 1 653 332 316 101 25 chr17 9011581 9011740 -86260911 + Charlie2a DNA MER1_type 1480 1650 -1211 1 653 367 237 10 58 chr17 9011716 9011819 -86260832 + Charlie2a DNA MER1_type 2707 2804 -57 1 653 2401 104 3 3 chr17 9011959 9012286 -86260365 - ORR1A2 LTR MaLR 0 327 1 1 653 326 42 21 0 chr17 9013325 9013373 -86259278 + (CAGA)n Simple_repeat Simple_repeat 4 52 0 1 653 623 260 46 11 chr17 9014452 9014627 -86258024 + B3A SINE B2 1 181 -17 2 653 905 172 51 51 chr17 9016037 9016252 -86256399 + B3 SINE B2 2 216 0 2 653 192 210 14 127 chr17 9017261 9017332 -86255319 + MIRm SINE MIR 116 178 -98 2 653 216 216 0 0 chr17 9017798 9017849 -86254802 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 653 480 143 124 71 chr17 9019080 9019193 -86253458 + MTD LTR MaLR 1 119 -300 2 653 871 135 24 21 chr17 9019193 9019484 -86253167 + CT-rich Low_complexity Low_complexity 1 292 0 2 653 784 181 0 0 chr17 9019494 9019621 -86253030 - B1_Mus2 SINE Alu -18 129 3 2 653 613 172 279 13 chr17 9019624 9019865 -86252786 + MTD LTR MaLR 112 405 -14 2 653 293 197 0 13 chr17 9020890 9020967 -86251684 + (TATG)n Simple_repeat Simple_repeat 4 79 0 2 653 23 33 0 0 chr17 9022712 9022742 -86249909 + AT_rich Low_complexity Low_complexity 1 30 0 2 653 561 30 0 0 chr17 9022866 9022933 -86249718 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 653 331 325 0 33 chr17 9024693 9024814 -86247837 + PB1D10 SINE Alu 1 117 0 3 653 300 297 0 0 chr17 9024814 9024888 -86247763 + ID4_ SINE ID 3 76 -7 3 653 213 226 35 12 chr17 9025839 9025924 -86246727 + (TA)n Simple_repeat Simple_repeat 2 88 0 3 653 252 0 0 0 chr17 9025935 9025963 -86246688 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 653 288 380 6 45 chr17 9026484 9026641 -86246010 - MLT2C2 LTR ERVL -224 240 90 3 653 985 148 175 0 chr17 9027263 9027446 -86245205 + URR1B DNA MER1_type 11 225 0 3 653 275 161 18 0 chr17 9027800 9027856 -86244795 + (CAAT)n Simple_repeat Simple_repeat 2 58 0 3 653 946 237 5 5 chr17 9027955 9028163 -86244488 + B3 SINE B2 3 210 -6 3 653 21 0 0 0 chr17 9028166 9028187 -86244464 + AT_rich Low_complexity Low_complexity 1 21 0 3 653 195 129 0 0 chr17 9028215 9028246 -86244405 + (TGG)n Simple_repeat Simple_repeat 1 31 0 3 653 414 0 0 0 chr17 9028482 9028528 -86244123 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 653 300 272 0 98 chr17 9028528 9028630 -86244021 + MTEa LTR MaLR 5 96 -283 4 653 267 258 30 0 chr17 9029323 9029389 -86243262 + MER81 DNA AcHobo 28 95 -19 4 653 940 221 9 112 chr17 9029752 9029966 -86242685 - B3 SINE B2 -3 192 1 4 653 363 289 71 24 chr17 9030142 9030312 -86242339 + B3 SINE B2 37 214 -2 4 653 592 252 55 0 chr17 9032820 9032947 -86239704 - B3 SINE B2 -81 135 2 4 653 553 255 13 26 chr17 9033154 9033307 -86239344 - RSINE1 SINE B4 -13 152 2 4 653 1340 77 16 37 chr17 9033332 9033522 -86239129 + B2_Mm2 SINE B2 1 186 -9 4 653 766 233 0 7 chr17 9033758 9033905 -86238746 + B1_Mur1 SINE Alu 4 149 0 4 653 536 189 0 72 chr17 9035442 9035636 -86237015 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 653 267 31 0 0 chr17 9038343 9038375 -86234276 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 653 474 65 0 0 chr17 9038799 9038861 -86233790 + (TC)n Simple_repeat Simple_repeat 1 62 0 5 653 831 224 33 33 chr17 9038867 9039047 -86233604 - B3 SINE B2 -35 181 2 5 653 342 0 0 0 chr17 9039145 9039183 -86233468 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 653 302 221 29 0 chr17 9039219 9039287 -86233364 + ID4_ SINE ID 14 83 0 5 653 1012 232 79 45 chr17 9040610 9040876 -86231775 + B4A SINE B4 2 276 -16 5 653 213 238 0 0 chr17 9040893 9041015 -86231636 + (CA)n Simple_repeat Simple_repeat 2 123 0 5 653 243 0 0 0 chr17 9041043 9041070 -86231581 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 653 769 193 20 7 chr17 9041101 9041247 -86231404 - B1_Mus1 SINE Alu 0 148 1 5 653 342 257 28 30 chr17 9041697 9041814 -86230837 - PB1D10 SINE Alu -1 148 21 5 653 297 344 56 8 chr17 9042100 9042154 -86230497 - ID_B1 SINE B4 -7 217 86 6 653 305 264 56 0 chr17 9042154 9042226 -86230425 - PB1D10 SINE Alu -37 80 5 6 654 668 177 240 0 chr17 9044213 9044388 -86228263 - URR1A DNA MER1_type 0 226 10 6 654 2548 32 19 6 chr17 9045211 9045523 -86227128 - L1Md_F3 LINE L1 0 6584 6269 6 654 909 176 0 0 chr17 9045888 9046100 -86226551 + (TG)n Simple_repeat Simple_repeat 1 212 0 6 654 391 165 24 0 chr17 9046210 9046295 -86226356 + (TA)n Simple_repeat Simple_repeat 1 87 0 6 654 300 319 164 34 chr17 9046584 9046847 -86225804 - L2 LINE L2 -518 2901 2605 6 654 691 309 103 32 chr17 9046935 9047276 -86225375 + MLT1A0 LTR MaLR 1 365 0 6 654 1075 294 98 3 chr17 9047538 9047876 -86224775 + MTEa LTR MaLR 8 377 -2 6 654 1140 272 105 32 chr17 9047913 9048352 -86224299 + MTE-int LTR MaLR 49 496 -1013 6 654 244 262 71 0 chr17 9048588 9048672 -86223979 - L1MC4a LINE L1 -488 7394 7305 7 654 711 0 0 0 chr17 9048681 9048760 -86223891 + (TTTTC)n Simple_repeat Simple_repeat 5 83 0 7 654 187 238 181 38 chr17 9049368 9049473 -86223178 - L4 LINE RTE -677 1352 1233 7 654 219 146 0 0 chr17 9049526 9049567 -86223084 + (CCCCCA)n Simple_repeat Simple_repeat 6 46 0 7 654 964 208 45 5 chr17 9050950 9051148 -86221503 - B3 SINE B2 -10 206 1 7 654 234 0 0 0 chr17 9052489 9052515 -86220136 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 654 290 288 0 0 chr17 9052819 9052892 -86219759 - 5S rRNA rRNA -32 89 17 7 654 472 206 8 8 chr17 9053875 9054007 -86218644 + (TA)n Simple_repeat Simple_repeat 2 133 0 7 654 350 241 24 50 chr17 9054514 9054647 -86218004 - MTEa LTR MaLR -5 374 229 7 654 698 63 0 190 chr17 9055037 9055174 -86217477 - B1_Mus1 SINE Alu 0 148 38 7 654 239 333 66 11 chr17 9055461 9055552 -86217099 - MLT2C1 LTR ERVL -299 98 3 8 654 711 211 38 19 chr17 9056040 9056199 -86216452 - URR1B DNA MER1_type 0 225 64 8 654 343 369 62 19 chr17 9056355 9056612 -86216039 - MER76 LTR ERVL -41 650 383 8 654 991 242 110 73 chr17 9056934 9057361 -86215290 + MT2A LTR ERVL 3 445 -88 8 654 32 98 0 0 chr17 9057376 9057478 -86215173 + AT_rich Low_complexity Low_complexity 1 102 0 8 654 228 76 0 175 chr17 9057493 9057573 -86215078 + MT2A LTR ERVL 468 533 0 8 654 373 296 68 45 chr17 9057573 9057750 -86214901 - ERVL-B4-int LTR ERVL -718 4996 4816 8 654 1394 256 20 26 chr17 9057964 9058326 -86214325 + MTE2b LTR MaLR 1 363 -16 8 654 384 238 130 38 chr17 9058375 9058506 -86214145 + B1F SINE Alu 7 149 0 8 654 477 148 0 0 chr17 9058632 9058713 -86213938 + (TA)n Simple_repeat Simple_repeat 2 82 0 8 654 348 161 0 0 chr17 9058713 9058769 -86213882 + (TG)n Simple_repeat Simple_repeat 2 57 0 8 654 182 240 133 48 chr17 9059587 9059692 -86212959 - L2a LINE L2 -42 3384 3271 9 654 327 323 91 14 chr17 9059990 9060210 -86212441 - L2 LINE L2 -623 2796 2560 9 654 414 57 0 0 chr17 9060219 9060272 -86212379 + (TCC)n Simple_repeat Simple_repeat 2 54 0 9 654 189 0 0 0 chr17 9063597 9063618 -86209033 + (CAA)n Simple_repeat Simple_repeat 1 21 0 9 654 474 241 44 22 chr17 9064517 9064653 -86207998 + B1F1 SINE Alu 6 144 -5 9 654 297 333 29 48 chr17 9067242 9067264 -86205387 + B4A SINE B4 69 88 -204 9 654 393 281 52 0 chr17 9067264 9067360 -86205291 + B1F1 SINE Alu 1 101 -48 9 654 215 328 115 58 chr17 9067717 9067856 -86204795 + B4A SINE B4 1 147 -145 9 654 701 183 76 8 chr17 9068256 9068388 -86204263 - B1_Mur2 SINE Alu -7 142 2 9 654 985 65 62 41 chr17 9069780 9069925 -86202726 + B1_Mus1 SINE Alu 1 148 0 9 654 268 321 73 9 chr17 9069950 9070060 -86202591 + MLT1E2 LTR MaLR 503 619 -8 1 654 857 258 83 106 chr17 9070358 9070718 -86201933 - MLT1A0 LTR MaLR -3 362 11 1 654 705 163 11 28 chr17 9070822 9070999 -86201652 + GA-rich Low_complexity Low_complexity 1 174 0 1 654 258 88 0 0 chr17 9070999 9071033 -86201618 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 1 654 35 71 0 0 chr17 9071373 9071443 -86201208 + AT_rich Low_complexity Low_complexity 1 70 0 1 654 180 0 0 0 chr17 9071613 9071633 -86201018 + (TTTTG)n Simple_repeat Simple_repeat 4 23 0 1 654 221 293 24 0 chr17 9072933 9073015 -86199636 + GA-rich Low_complexity Low_complexity 1 84 0 1 654 376 287 70 20 chr17 9074951 9075002 -86197649 - L1MD LINE L1 -803 5343 5285 1 654 243 0 0 0 chr17 9075002 9075029 -86197622 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 654 376 287 70 20 chr17 9075029 9075176 -86197475 - L1MD LINE L1 -862 5284 5135 1 654 249 337 87 58 chr17 9075350 9075523 -86197128 - MTEa LTR MaLR -190 189 12 1 654 480 280 35 14 chr17 9076425 9076595 -86196056 + B4 SINE B4 4 171 -53 1 654 212 236 82 41 chr17 9076513 9076610 -86196041 + PB1D10 SINE Alu 9 109 -8 1 654 657 172 26 20 chr17 9076622 9076974 -86195677 + (CA)n Simple_repeat Simple_repeat 1 354 0 1 654 206 290 14 28 chr17 9077046 9077117 -86195534 + L2 LINE L2 1469 1538 -1881 1 654 309 26 0 0 chr17 9077167 9077205 -86195446 + (TC)n Simple_repeat Simple_repeat 2 39 0 1 654 671 253 61 61 chr17 9077423 9077621 -86195030 - B3A SINE B2 0 198 1 1 654 302 333 105 5 chr17 9077652 9077842 -86194809 - L1MB4 LINE L1 -6169 438 230 1 654 180 239 21 21 chr17 9078977 9079024 -86193627 - L2 LINE L2 -1081 2338 2292 1 654 195 129 0 0 chr17 9079490 9079521 -86193130 + (CATA)n Simple_repeat Simple_repeat 1 31 0 1 654 601 195 8 24 chr17 9079904 9080030 -86192621 - MTB_Mm LTR MaLR 0 421 298 1 654 772 102 16 33 chr17 9080030 9080152 -86192499 - MTB_Mm LTR MaLR -284 123 4 1 654 612 236 0 0 chr17 9080180 9080358 -86192293 + (TG)n Simple_repeat Simple_repeat 2 179 0 1 654 208 147 0 0 chr17 9080426 9080460 -86192191 + (T)n Simple_repeat Simple_repeat 1 34 0 1 654 325 285 57 8 chr17 9081063 9081187 -86191464 + ORR1D2 LTR MaLR 5 134 -236 1 654 235 260 26 130 chr17 9081598 9081713 -86190938 - PB1D10 SINE Alu -7 110 8 1 654 312 259 12 24 chr17 9082016 9082099 -86190552 - B4A SINE B4 -209 83 2 1 654 8397 42 4 0 chr17 9082108 9083298 -86189353 - L1Md_F2 LINE L1 -2 6580 5387 1 654 27 0 0 0 chr17 9083371 9083398 -86189253 + AT_rich Low_complexity Low_complexity 1 27 0 1 654 2165 95 68 10 chr17 9083409 9083717 -86188934 - ORR1A2 LTR MaLR 0 327 2 1 654 963 70 0 0 chr17 9083721 9083849 -86188802 + (TTTC)n Simple_repeat Simple_repeat 3 130 0 1 654 222 37 0 0 chr17 9084004 9084031 -86188620 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 654 1203 88 0 0 chr17 9084031 9084190 -86188461 - B2_Mm2 SINE B2 -33 162 4 1 654 558 339 73 77 chr17 9086370 9086917 -86185734 - MER68 LTR ERVL -9 554 10 1 654 1007 307 93 30 chr17 9089223 9090073 -86182578 - L1MC3 LINE L1 -1655 6130 5225 1 654 225 94 0 0 chr17 9092046 9092078 -86180573 + (A)n Simple_repeat Simple_repeat 1 32 0 1 654 454 310 61 65 chr17 9093556 9093849 -86178802 + B4A SINE B4 1 292 0 1 654 569 230 6 0 chr17 9093867 9094045 -86178606 + (CA)n Simple_repeat Simple_repeat 1 179 0 1 654 225 254 0 0 chr17 9094057 9094128 -86178523 + (CA)n Simple_repeat Simple_repeat 2 72 0 1 654 1866 229 35 17 chr17 9094216 9094621 -86178030 - MTC LTR MaLR -8 413 2 1 654 535 247 60 66 chr17 9094716 9094898 -86177753 + B3A SINE B2 2 182 -16 1 654 435 217 11 174 chr17 9094902 9095086 -86177565 - ORR1D2 LTR MaLR -1 369 216 1 654 310 241 51 0 chr17 9095241 9095320 -86177331 + CT-rich Low_complexity Low_complexity 6 88 0 1 654 21 0 0 0 chr17 9096340 9096361 -86176290 + AT_rich Low_complexity Low_complexity 1 21 0 1 654 402 21 0 0 chr17 9097272 9097319 -86175332 + (CAAAA)n Simple_repeat Simple_repeat 4 50 0 1 654 31 0 0 0 chr17 9097368 9097399 -86175252 + AT_rich Low_complexity Low_complexity 1 31 0 1 654 1655 206 42 55 chr17 9097439 9097820 -86174831 - MTD LTR MaLR -30 389 14 1 654 3334 36 0 0 chr17 9097987 9098376 -86174275 + L1Md_T LINE L1 6194 6582 0 1 654 936 134 18 0 chr17 9098963 9099134 -86173517 + GA-rich Low_complexity Low_complexity 4 177 0 1 654 867 80 20 40 chr17 9099113 9099413 -86173238 + (GA)n Simple_repeat Simple_repeat 1 294 0 1 654 827 83 59 0 chr17 9099435 9099604 -86173047 + (GA)n Simple_repeat Simple_repeat 1 179 0 1 654 865 69 40 23 chr17 9099619 9099796 -86172855 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 654 1026 90 6 27 chr17 9099802 9099985 -86172666 + (GGAGA)n Simple_repeat Simple_repeat 1 179 0 1 654 216 0 0 0 chr17 9100167 9100191 -86172460 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 654 1246 120 0 25 chr17 9100986 9101182 -86171469 + B2_Mm2 SINE B2 2 192 -3 1 654 617 297 36 72 chr17 9101438 9101717 -86170934 + ORR1C2 LTR MaLR 5 273 -101 1 654 831 184 30 148 chr17 9101692 9101928 -86170723 + ORR1C2 LTR MaLR 176 383 -1 1 654 205 162 0 0 chr17 9102626 9102663 -86169988 + (CGGGG)n Simple_repeat Simple_repeat 5 41 0 1 654 5232 68 21 17 chr17 9103900 9104601 -86168050 - L1_Mus2 LINE L1 0 6566 5863 1 654 253 345 27 27 chr17 9105326 9105472 -86167179 + RSINE1 SINE B4 5 150 -15 1 654 30 27 0 0 chr17 9105501 9105538 -86167113 + AT_rich Low_complexity Low_complexity 1 37 0 1 654 241 259 0 79 chr17 9105541 9105582 -86167069 + B4A SINE B4 231 270 -22 1 654 1461 42 0 0 chr17 9105582 9105801 -86166850 + (CA)n Simple_repeat Simple_repeat 1 219 0 1 654 241 259 0 79 chr17 9105801 9105819 -86166832 + B4A SINE B4 271 288 -4 1 654 292 5 5 0 chr17 9107708 9107751 -86164900 + L1Md_F2 LINE L1 6531 6575 -9 1 654 250 264 119 103 chr17 9108096 9108290 -86164361 - Charlie1 DNA MER1_type -1530 1251 1055 1 654 717 278 123 4 chr17 9108471 9108706 -86163945 - B4A SINE B4 -29 263 1 1 654 379 269 6 109 chr17 9108715 9108923 -86163728 - L1M3 LINE L1 -867 5273 5025 1 654 225 0 0 0 chr17 9109751 9109776 -86162875 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1 654 3498 23 5 0 chr17 9109820 9110214 -86162437 - MTA_Mm LTR MaLR 0 396 1 1 654 9661 19 3 0 chr17 9110214 9111309 -86161342 - MTA_Mm-int LTR MaLR 0 1098 1 1 654 3516 18 10 0 chr17 9111309 9111701 -86160950 - MTA_Mm LTR MaLR 0 396 1 1 654 410 167 12 0 chr17 9111981 9112065 -86160586 + GA-rich Low_complexity Low_complexity 3 87 0 1 654 322 277 19 122 chr17 9114002 9114158 -86158493 + B4A SINE B4 2 141 -151 1 654 443 107 22 77 chr17 9115076 9115167 -86157484 + B2_Mm2 SINE B2 104 189 -6 1 654 784 181 30 53 chr17 9115567 9115736 -86156915 - B3 SINE B2 -51 165 1 1 654 294 228 202 0 chr17 9116143 9116222 -86156429 + B1F2 SINE Alu 15 109 -40 1 654 317 258 134 0 chr17 9116152 9116249 -86156402 + ID_B1 SINE B4 105 214 -10 1 654 234 0 0 0 chr17 9116432 9116458 -86156193 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 654 606 109 0 0 chr17 9116458 9116568 -86156083 + (GA)n Simple_repeat Simple_repeat 2 111 0 1 654 979 286 62 75 chr17 9116682 9117061 -86155590 - MTE2b LTR MaLR 0 421 6 1 654 232 273 14 43 chr17 9118648 9118717 -86153934 - ID4_ SINE ID -1 82 16 1 654 315 265 18 89 chr17 9118968 9119080 -86153571 + B4 SINE B4 2 105 -187 1 654 192 111 0 0 chr17 9119510 9119546 -86153105 + (TC)n Simple_repeat Simple_repeat 1 36 0 1 654 426 39 0 0 chr17 9119546 9119598 -86153053 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 654 218 239 82 82 chr17 9119739 9119812 -86152839 + B3A SINE B2 9 81 -117 1 654 305 308 37 18 chr17 9120582 9120691 -86151960 - ERVL-E-int LTR ERVL -4149 1518 1408 1 654 211 167 0 127 chr17 9121248 9121303 -86151348 - L2 LINE L2 -1900 1519 1472 1 654 228 247 114 34 chr17 9122165 9122253 -86150398 + LTR90A LTR LTR 31 125 -851 1 654 209 91 0 43 chr17 9122356 9122380 -86150271 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 654 282 56 0 0 chr17 9122380 9122416 -86150235 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 654 209 91 0 43 chr17 9122416 9122437 -86150214 + (TTTG)n Simple_repeat Simple_repeat 1 21 0 1 654 420 20 0 0 chr17 9124778 9124827 -86147824 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 654 701 284 15 30 chr17 9126653 9126817 -86145834 + B3A SINE B2 2 166 -32 1 654 408 71 0 0 chr17 9126817 9126873 -86145778 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 654 701 284 15 30 chr17 9126873 9126908 -86145743 + B3A SINE B2 167 198 0 1 654 1625 284 79 97 chr17 9127381 9127942 -86144709 - Lx8 LINE L1 -245 7228 6687 1 654 1187 62 0 0 chr17 9127942 9128088 -86144563 + B1_Mus1 SINE Alu 1 146 -2 1 654 351 0 0 0 chr17 9128088 9128127 -86144524 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 654 1625 284 79 97 chr17 9128127 9128345 -86144306 - Lx8 LINE L1 -787 6686 6463 1 654 314 138 17 0 chr17 9128801 9128859 -86143792 + (ATG)n Simple_repeat Simple_repeat 1 59 0 1 654 1305 65 18 6 chr17 9128862 9129373 -86143278 + (TCC)n Simple_repeat Simple_repeat 1 516 0 1 654 251 162 39 39 chr17 9129937 9130014 -86142637 + (TTATA)n Simple_repeat Simple_repeat 4 80 0 1 654 414 213 0 0 chr17 9130084 9130178 -86142473 + (TATG)n Simple_repeat Simple_repeat 3 96 0 1 654 467 302 21 21 chr17 9131137 9131279 -86141372 + RSINE1 SINE B4 2 143 -22 1 654 211 333 74 113 chr17 9131279 9131340 -86141311 + B2_Mm2 SINE B2 1 195 0 1 654 469 260 172 6 chr17 9132324 9132498 -86140153 + Lx8 LINE L1 6276 6478 -995 1 654 207 215 0 0 chr17 9132537 9132602 -86140049 + (CTG)n Simple_repeat Simple_repeat 3 67 0 1 654 294 259 129 54 chr17 9132604 9132751 -86139900 + Lx8 LINE L1 6749 6906 -567 1 654 263 150 17 0 chr17 9132990 9133050 -86139601 + CT-rich Low_complexity Low_complexity 4 64 0 1 654 21 0 0 0 chr17 9133320 9133341 -86139310 + AT_rich Low_complexity Low_complexity 1 21 0 1 654 208 130 0 61 chr17 9133407 9133456 -86139195 + A-rich Low_complexity Low_complexity 5 50 0 1 654 237 196 0 0 chr17 9134963 9135019 -86137632 + CT-rich Low_complexity Low_complexity 3 58 0 2 654 311 113 19 0 chr17 9135065 9135118 -86137533 + (GGAA)n Simple_repeat Simple_repeat 3 56 0 2 654 207 0 0 0 chr17 9136126 9136149 -86136502 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2 654 558 262 86 17 chr17 9136733 9136908 -86135743 + B4 SINE B4 44 230 -62 2 654 647 220 85 0 chr17 9141057 9141198 -86131453 + B3A SINE B2 1 153 -45 2 654 404 237 20 20 chr17 9141702 9141801 -86130850 - PB1D9 SINE Alu -4 116 18 2 654 290 354 0 29 chr17 9144763 9144865 -86127786 + MIR SINE MIR 45 143 -119 2 654 249 333 74 7 chr17 9150058 9150206 -86122445 - MIR SINE MIR -87 175 18 2 654 454 266 98 78 chr17 9151493 9151738 -86120913 + Charlie7 DNA MER1_type 1610 1859 -753 2 654 661 299 63 11 chr17 9151842 9152126 -86120525 - L1_Mur3 LINE L1 -4181 1699 1401 2 654 845 276 306 20 chr17 9153026 9153523 -86119128 - RCHARR1 DNA MER1_type -335 639 1 2 654 359 162 30 10 chr17 9153861 9153961 -86118690 + (TA)n Simple_repeat Simple_repeat 2 103 0 2 654 247 292 43 17 chr17 9155005 9155120 -86117531 + PB1D9 SINE Alu 1 118 -2 2 654 569 67 133 0 chr17 9156601 9156691 -86115960 - B2_Mm2 SINE B2 -3 192 91 2 654 378 0 0 0 chr17 9157742 9157784 -86114867 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 654 749 209 0 0 chr17 9157873 9158021 -86114630 - B1_Mus1 SINE Alu 0 148 1 2 654 672 262 103 19 chr17 9158611 9158872 -86113779 + B4A SINE B4 1 283 -9 2 654 226 269 188 29 chr17 9158926 9159064 -86113587 - RMER12 LTR ERVK -480 842 683 2 654 592 263 75 25 chr17 9160635 9160834 -86111817 - Lx8 LINE L1 -1065 6408 6200 2 654 207 0 0 0 chr17 9160945 9160968 -86111683 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 654 1136 189 72 93 chr17 9161092 9161498 -86111153 - ORR1B1 LTR MaLR -1 393 1 2 654 854 209 175 0 chr17 9163990 9164167 -86108484 + B3 SINE B2 5 212 -4 2 654 780 104 176 0 chr17 9164608 9164733 -86107918 - B1_Mus1 SINE Alu 0 148 2 2 654 198 0 0 0 chr17 9167137 9167159 -86105492 + (T)n Simple_repeat Simple_repeat 1 22 0 2 654 1355 161 4 9 chr17 9168188 9168414 -86104237 + URR1B DNA MER1_type 1 225 0 2 654 423 0 0 0 chr17 9168422 9168469 -86104182 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 654 234 0 0 0 chr17 9170106 9170132 -86102519 + (GCTG)n Simple_repeat Simple_repeat 1 26 0 2 654 272 311 37 9 chr17 9170706 9170813 -86101838 + B1F SINE Alu 1 110 -39 2 654 228 67 0 0 chr17 9171231 9171261 -86101390 + (TGGGGG)n Simple_repeat Simple_repeat 4 33 0 2 654 450 0 0 0 chr17 9171491 9171541 -86101110 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 654 330 87 0 0 chr17 9171541 9171586 -86101065 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 654 326 349 121 6 chr17 9172007 9172180 -86100471 - LTR69 LTR ERVL -5 583 391 2 654 554 104 281 0 chr17 9172842 9172938 -86099713 - B1_Mus2 SINE Alu -13 134 12 2 654 308 236 0 111 chr17 9172882 9172963 -86099688 - B4 SINE B4 -140 152 81 2 654 195 314 69 53 chr17 9173004 9173135 -86099516 - L4 LINE RTE -1495 534 402 2 655 276 262 0 15 chr17 9176039 9176105 -86096546 + (CA)n Simple_repeat Simple_repeat 1 65 0 2 655 1854 169 89 32 chr17 9179722 9180102 -86092549 + MTD LTR MaLR 7 408 -11 2 655 446 260 142 113 chr17 9181447 9181694 -86090957 - MTE2b LTR MaLR -124 255 2 2 655 349 301 185 39 chr17 9182489 9182613 -86090038 + MTD LTR MaLR 6 138 -281 2 655 3415 28 0 15 chr17 9182613 9183015 -86089636 + MTA_Mm LTR MaLR 1 396 0 2 655 349 301 185 39 chr17 9183015 9183122 -86089529 + MTD LTR MaLR 139 271 -148 2 655 402 21 0 0 chr17 9185621 9185668 -86086983 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 655 297 0 0 0 chr17 9186666 9186699 -86085952 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 655 1090 213 121 51 chr17 9187059 9187391 -86085260 - ORR1E LTR MaLR -4 355 1 2 655 353 288 294 9 chr17 9187746 9187967 -86084684 + B4A SINE B4 1 284 -8 2 655 214 39 55 73 chr17 9188543 9188598 -86084053 + A-rich Low_complexity Low_complexity 5 58 0 2 655 1049 219 0 10 chr17 9188718 9188921 -86083730 + B3 SINE B2 5 205 -11 2 655 1310 53 25 0 chr17 9188924 9189243 -86083408 + (TAGA)n Simple_repeat Simple_repeat 1 327 0 2 655 493 295 256 19 chr17 9190443 9190751 -86081900 - MER54A LTR ERVL -19 882 502 2 655 262 326 120 4 chr17 9190804 9191038 -86081613 - MER54A LTR ERVL -477 424 164 2 655 180 111 0 0 chr17 9191351 9191378 -86081273 + (GGA)n Simple_repeat Simple_repeat 2 28 0 2 655 186 133 0 0 chr17 9191379 9191409 -86081242 + (ATGGTG)n Simple_repeat Simple_repeat 4 33 0 2 655 423 236 6 18 chr17 9191443 9191611 -86081040 + (ATGGTG)n Simple_repeat Simple_repeat 2 167 0 2 655 213 121 0 0 chr17 9191627 9191660 -86080991 + (ATGGTG)n Simple_repeat Simple_repeat 5 37 0 2 655 1000 234 92 19 chr17 9192609 9192870 -86079781 - B4A SINE B4 -6 286 7 2 655 684 238 78 13 chr17 9192926 9193079 -86079572 - RSINE1 SINE B4 0 165 3 2 655 661 278 107 32 chr17 9193232 9193485 -86079166 + B4A SINE B4 1 272 -20 2 655 648 232 0 0 chr17 9193534 9193711 -86078940 + (CA)n Simple_repeat Simple_repeat 2 178 0 2 655 570 214 0 27 chr17 9193725 9193908 -86078743 + (CATA)n Simple_repeat Simple_repeat 1 178 0 2 655 235 65 21 21 chr17 9195068 9195115 -86077536 + (TTG)n Simple_repeat Simple_repeat 2 48 0 2 655 198 67 0 0 chr17 9195115 9195140 -86077511 + (T)n Simple_repeat Simple_repeat 1 25 0 2 655 288 0 0 0 chr17 9195280 9195312 -86077339 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 655 623 243 54 27 chr17 9195315 9195463 -86077188 - B3A SINE B2 -46 152 1 2 655 389 365 13 0 chr17 9195526 9195685 -86076966 - Tigger1 DNA MER2_type -9 2409 2249 2 655 344 327 9 35 chr17 9195720 9195834 -86076817 - Tigger1 DNA MER2_type -2307 111 1 2 655 241 269 180 25 chr17 9195847 9195969 -86076682 - B1F1 SINE Alu -8 141 1 2 655 1194 212 55 45 chr17 9196121 9196432 -86076219 - Lx7 LINE L1 -27 7669 7356 2 655 464 48 16 0 chr17 9196461 9196524 -86076127 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 2 655 534 146 9 18 chr17 9196587 9196699 -86075952 + GA-rich Low_complexity Low_complexity 2 112 0 2 655 971 213 22 31 chr17 9196702 9196925 -86075726 - Lx7 LINE L1 -329 7367 7147 2 655 2968 161 103 28 chr17 9196963 9197651 -86075000 - L1_Mur3 LINE L1 -6604 1108 369 2 655 925 161 112 0 chr17 9197665 9197708 -86074943 - L1_Mur3 LINE L1 -7203 509 460 2 655 396 0 0 0 chr17 9197708 9197752 -86074899 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 655 925 161 112 0 chr17 9197752 9197913 -86074738 - L1_Mur3 LINE L1 -7253 459 283 2 655 573 307 82 19 chr17 9198707 9198976 -86073675 - B4A SINE B4 -5 287 2 2 655 1437 65 38 0 chr17 9199346 9199532 -86073119 + B2_Mm2 SINE B2 1 193 -2 2 655 223 226 14 151 chr17 9199617 9199690 -86072961 + RSINE1 SINE B4 97 159 -6 2 655 296 276 28 9 chr17 9200041 9200147 -86072504 + (TA)n Simple_repeat Simple_repeat 2 109 0 2 655 228 228 0 0 chr17 9200164 9200221 -86072430 + (TATATG)n Simple_repeat Simple_repeat 4 60 0 2 655 569 306 49 89 chr17 9201224 9201550 -86071101 - ORR1E LTR MaLR -40 319 7 2 655 538 253 121 24 chr17 9201971 9202154 -86070497 + MTD LTR MaLR 195 419 0 2 655 201 125 54 0 chr17 9202163 9202219 -86070432 + GA-rich Low_complexity Low_complexity 3 61 0 2 655 1168 187 120 31 chr17 9202435 9202753 -86069898 + MTD LTR MaLR 24 374 -5 2 655 185 108 27 0 chr17 9203245 9203282 -86069369 + (TC)n Simple_repeat Simple_repeat 1 38 0 2 655 459 87 0 0 chr17 9203282 9203351 -86069300 + (TG)n Simple_repeat Simple_repeat 2 70 0 2 655 186 118 0 0 chr17 9203416 9203450 -86069201 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 655 257 275 145 0 chr17 9203457 9203526 -86069125 - RSINE1 SINE B4 -19 146 68 2 655 387 277 11 11 chr17 9205246 9205341 -86067310 - RLTR20B3 LTR ERVK 0 563 469 2 655 372 94 0 0 chr17 9205342 9205395 -86067256 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 655 197 0 0 67 chr17 9205395 9205425 -86067226 + (CAGAGA)n Simple_repeat Simple_repeat 3 30 0 2 655 779 103 51 8 chr17 9205462 9205579 -86067072 - B1_Mus1 SINE Alu -25 123 2 2 655 881 226 16 12 chr17 9205580 9205834 -86066817 - RLTR20B3 LTR ERVK -105 472 1 2 655 381 199 84 0 chr17 9206027 9206158 -86066493 + (TCTA)n Simple_repeat Simple_repeat 3 144 0 2 655 420 82 0 0 chr17 9206163 9206224 -86066427 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 655 27 29 0 0 chr17 9206339 9206373 -86066278 + AT_rich Low_complexity Low_complexity 1 34 0 2 655 278 26 0 25 chr17 9206661 9206701 -86065950 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 655 758 244 37 16 chr17 9207337 9207524 -86065127 - B3 SINE B2 -11 205 15 2 655 819 135 0 0 chr17 9208128 9208261 -86064390 + (TCC)n Simple_repeat Simple_repeat 3 135 0 2 655 2100 102 12 84 chr17 9208647 9208991 -86063660 + ORR1A2 LTR MaLR 1 319 -8 2 655 293 190 101 14 chr17 9210175 9210314 -86062337 - Lx9 LINE L1 -15 7629 7479 2 655 395 167 55 6 chr17 9210316 9210479 -86062172 + (TA)n Simple_repeat Simple_repeat 1 171 0 2 655 450 0 0 0 chr17 9210552 9210602 -86062049 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 655 257 262 11 35 chr17 9210621 9210708 -86061943 - Lx9 LINE L1 -203 7441 7357 2 655 445 304 8 0 chr17 9210747 9210903 -86061748 - Lx9 LINE L1 -468 7176 6888 2 655 1071 205 44 5 chr17 9211009 9211215 -86061436 - B3 SINE B2 -2 214 1 2 655 1015 237 9 18 chr17 9211470 9211689 -86060962 + ID_B1 SINE B4 2 218 -6 2 655 645 299 58 5 chr17 9212756 9212961 -86059690 + MER88 LTR ERVL 249 464 0 2 655 304 286 68 107 chr17 9213169 9213346 -86059305 + MLT1C LTR MaLR 179 449 -18 2 655 374 275 55 0 chr17 9213340 9213431 -86059220 + PB1D7 SINE Alu 10 105 -15 2 655 305 235 15 0 chr17 9214598 9214666 -86057985 + ID4_ SINE ID 3 71 -12 2 655 624 259 202 23 chr17 9215204 9215461 -86057190 - Lx8 LINE L1 -1 7472 7170 3 655 258 32 0 0 chr17 9215739 9215770 -86056881 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 3 655 650 234 74 48 chr17 9217104 9217313 -86055338 - B3A SINE B2 0 198 7 3 655 2491 95 3 0 chr17 9217482 9217807 -86054844 + ORR1A2 LTR MaLR 1 326 -1 3 655 401 302 97 40 chr17 9217956 9218132 -86054519 - B4A SINE B4 0 292 107 3 655 276 229 55 41 chr17 9218221 9218294 -86054357 + MamGypLTR3 LTR Gypsy 214 287 -552 3 655 223 154 85 19 chr17 9220387 9220493 -86052158 + (TA)n Simple_repeat Simple_repeat 2 114 0 3 655 305 174 37 15 chr17 9220505 9220639 -86052012 + (TA)n Simple_repeat Simple_repeat 2 138 0 3 655 1790 318 53 27 chr17 9220780 9221560 -86051091 - Lx8 LINE L1 -144 7329 6530 3 655 503 239 8 17 chr17 9221564 9221683 -86050968 + Lx8 LINE L1 6413 6530 -943 3 655 198 91 0 0 chr17 9221929 9221962 -86050689 + (CCAA)n Simple_repeat Simple_repeat 3 35 0 3 655 245 264 124 22 chr17 9222812 9222901 -86049750 + ORR1E LTR MaLR 52 149 -210 3 655 306 0 0 0 chr17 9223013 9223047 -86049604 + (T)n Simple_repeat Simple_repeat 1 34 0 3 655 198 0 0 0 chr17 9223458 9223480 -86049171 + (T)n Simple_repeat Simple_repeat 1 22 0 3 655 1620 6 0 0 chr17 9223643 9224129 -86048522 + (CA)n Simple_repeat Simple_repeat 1 486 0 3 655 491 222 17 17 chr17 9225950 9226129 -86046522 + GA-rich Low_complexity Low_complexity 1 179 0 3 655 474 207 0 40 chr17 9226098 9226249 -86046402 + G-rich Low_complexity Low_complexity 1 145 0 3 655 315 167 49 42 chr17 9226276 9226420 -86046231 + GA-rich Low_complexity Low_complexity 2 146 0 3 655 3591 293 45 28 chr17 9226724 9227969 -86044682 - Lx8 LINE L1 -149 7324 6059 3 655 254 180 16 0 chr17 9228366 9228427 -86044224 + (TTA)n Simple_repeat Simple_repeat 2 63 0 3 655 603 259 44 39 chr17 9228551 9228756 -86043895 + Lx8 LINE L1 6923 7128 -345 3 655 2511 54 12 0 chr17 9230659 9230993 -86041658 + IAPEY_LTR LTR ERVK 48 385 0 3 655 324 0 0 0 chr17 9231125 9231161 -86041490 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 655 693 28 18 36 chr17 9231690 9231801 -86040850 - L1Md_F3 LINE L1 0 6584 6476 3 655 604 309 53 28 chr17 9232287 9232643 -86040008 - MLT1A0 LTR MaLR 0 365 1 3 655 621 290 54 40 chr17 9233893 9234116 -86038535 - MTEa LTR MaLR -153 226 1 3 655 189 0 0 0 chr17 9235375 9235396 -86037255 + (TGG)n Simple_repeat Simple_repeat 2 22 0 3 655 490 250 158 0 chr17 9235694 9235846 -86036805 + B3 SINE B2 1 176 -40 3 655 23 0 0 0 chr17 9236515 9236538 -86036113 + AT_rich Low_complexity Low_complexity 1 23 0 3 655 987 278 19 71 chr17 9237999 9238378 -86034273 - ORR1E LTR MaLR 0 359 1 3 655 414 275 33 8 chr17 9238569 9238690 -86033961 - RMER5 LTR ERV1 -2 532 409 3 655 451 324 56 21 chr17 9238709 9238996 -86033655 - RMER5 LTR ERV1 -163 371 75 3 655 966 232 117 42 chr17 9239827 9240196 -86032455 - MTD LTR MaLR -14 407 8 3 655 441 0 0 0 chr17 9241360 9241409 -86031242 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 655 22 0 0 0 chr17 9242303 9242325 -86030326 + AT_rich Low_complexity Low_complexity 1 22 0 3 655 218 361 45 76 chr17 9242684 9242882 -86029769 - B3 SINE B2 -13 203 12 3 655 679 280 6 58 chr17 9242720 9242891 -86029760 - RSINE1 SINE B4 0 165 4 3 655 4037 59 23 0 chr17 9242942 9243454 -86029197 - L1_Mus1 LINE L1 -1 6566 6043 3 655 1606 249 20 0 chr17 9243689 9244047 -86028604 + MTE2b LTR MaLR 1 365 -14 3 655 192 77 0 0 chr17 9244156 9244182 -86028469 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3 655 342 0 0 0 chr17 9246206 9246244 -86026407 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 655 359 309 87 46 chr17 9246244 9246417 -86026234 - Lx8 LINE L1 -35 7438 7259 3 655 1046 295 142 17 chr17 9246528 9247348 -86025303 - L1M2 LINE L1 -2683 3460 2539 3 655 212 200 47 0 chr17 9247458 9247543 -86025108 + (TCTA)n Simple_repeat Simple_repeat 3 91 0 3 655 29 0 0 0 chr17 9247768 9247797 -86024854 + AT_rich Low_complexity Low_complexity 1 29 0 3 655 750 259 72 0 chr17 9247797 9247990 -86024661 - B3 SINE B2 -9 207 1 3 655 256 284 45 0 chr17 9249284 9249372 -86023279 - U6 snRNA snRNA -8 99 8 3 655 180 0 0 0 chr17 9250526 9250546 -86022105 + (A)n Simple_repeat Simple_repeat 1 20 0 3 655 2886 78 25 27 chr17 9250597 9251005 -86021646 + MTB_Mm LTR MaLR 1 407 0 3 655 184 240 9 0 chr17 9251302 9251344 -86021307 - MIR SINE MIR -113 163 113 3 655 225 402 0 0 chr17 9252151 9252258 -86020393 - L1M4 LINE L1 -5852 690 584 3 655 507 328 43 24 chr17 9252479 9252688 -86019963 + B4A SINE B4 48 260 -32 3 655 532 267 134 110 chr17 9253101 9253157 -86019494 + ORR1E LTR MaLR 3 59 -300 3 655 1828 140 67 19 chr17 9253157 9253471 -86019180 - ORR1A4 LTR MaLR 0 329 1 3 655 532 267 134 110 chr17 9253471 9253704 -86018947 + ORR1E LTR MaLR 60 299 -60 3 655 21 0 0 0 chr17 9253707 9253728 -86018923 + AT_rich Low_complexity Low_complexity 1 21 0 3 655 956 234 45 0 chr17 9253732 9253933 -86018718 - B3 SINE B2 -6 210 1 3 655 244 275 33 0 chr17 9256527 9256618 -86016033 - L1M4 LINE L1 -836 5310 5217 3 655 198 0 0 0 chr17 9258021 9258043 -86014608 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 3 655 358 337 11 33 chr17 9258416 9258597 -86014054 + (CATA)n Simple_repeat Simple_repeat 2 178 0 3 655 234 0 0 0 chr17 9259654 9259680 -86012971 + (A)n Simple_repeat Simple_repeat 1 26 0 3 655 765 125 0 0 chr17 9259769 9259889 -86012762 + (TTCTC)n Simple_repeat Simple_repeat 1 120 0 3 655 854 257 0 37 chr17 9260242 9260460 -86012191 + B3 SINE B2 5 214 -2 3 655 367 324 55 9 chr17 9260552 9260770 -86011881 - MLT1B LTR MaLR -117 273 46 3 655 612 0 0 0 chr17 9261653 9261721 -86010930 + (TC)n Simple_repeat Simple_repeat 1 68 0 3 655 570 182 0 0 chr17 9263463 9263573 -86009078 + (CA)n Simple_repeat Simple_repeat 1 110 0 3 655 1148 57 7 0 chr17 9263783 9263924 -86008727 + B1_Mus2 SINE Alu 2 143 -4 3 655 707 0 12 0 chr17 9263926 9264009 -86008642 + (GA)n Simple_repeat Simple_repeat 2 85 0 3 655 975 289 36 13 chr17 9264202 9264504 -86008147 + MTE2a LTR MaLR 10 318 -61 3 655 581 183 24 32 chr17 9264517 9264641 -86008010 + RMER19C LTR ERVK 422 544 -67 3 655 2113 79 9 57 chr17 9264646 9264871 -86007780 - ORR1A2 LTR MaLR -8 319 101 3 655 1205 62 0 0 chr17 9264871 9265017 -86007634 - B1_Mm SINE Alu 0 147 2 3 655 2113 79 9 57 chr17 9265017 9265126 -86007525 - ORR1A2 LTR MaLR -227 100 1 3 655 326 186 28 14 chr17 9265126 9265197 -86007454 + RMER19C LTR ERVK 831 902 0 3 655 411 68 0 0 chr17 9266946 9267005 -86005646 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 655 25 83 0 0 chr17 9267053 9267113 -86005538 + AT_rich Low_complexity Low_complexity 1 60 0 3 655 477 330 109 20 chr17 9267217 9267610 -86005041 - Lx9 LINE L1 -7 7637 7210 3 655 350 304 112 37 chr17 9267646 9267995 -86004656 - L1M5 LINE L1 -2405 3741 3367 3 655 601 265 84 6 chr17 9268435 9268602 -86004049 - B3A SINE B2 -18 180 1 3 655 433 154 11 11 chr17 9268957 9269049 -86003602 + (TA)n Simple_repeat Simple_repeat 1 92 0 3 655 212 296 70 0 chr17 9269248 9269319 -86003332 - B3A SINE B2 -116 82 7 3 655 296 372 87 26 chr17 9270673 9270902 -86001749 + LTR33 LTR ERVL 265 507 -8 3 655 252 226 0 0 chr17 9271369 9271431 -86001220 + CT-rich Low_complexity Low_complexity 1 62 0 3 655 450 0 0 0 chr17 9271968 9272018 -86000633 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 655 477 47 0 0 chr17 9272776 9272840 -85999811 + (TG)n Simple_repeat Simple_repeat 2 65 0 3 655 501 293 107 12 chr17 9272869 9273121 -85999530 - B4A SINE B4 -14 278 3 3 655 397 357 11 92 chr17 9273123 9273404 -85999247 + MLT2C2 LTR ERVL 3 260 -204 3 655 278 341 35 88 chr17 9273908 9274226 -85998425 - L1M4 LINE L1 -513 5667 5367 3 655 339 314 58 0 chr17 9274262 9274399 -85998252 - L1M4 LINE L1 -1100 5046 4902 3 655 724 284 60 54 chr17 9276584 9276934 -85995717 + MTD LTR MaLR 1 352 -67 3 655 274 122 38 68 chr17 9276934 9277066 -85995585 + A-rich Low_complexity Low_complexity 2 129 0 3 655 585 0 0 0 chr17 9278106 9278171 -85994480 + (GA)n Simple_repeat Simple_repeat 1 65 0 3 655 259 329 0 0 chr17 9278885 9278958 -85993693 + GA-rich Low_complexity Low_complexity 3 75 0 3 655 860 270 22 47 chr17 9278964 9279240 -85993411 - B4 SINE B4 -20 272 4 3 655 400 344 47 0 chr17 9280219 9280347 -85992304 + RSINE1 SINE B4 18 151 -14 3 655 717 158 16 24 chr17 9280349 9280595 -85992056 + (TATG)n Simple_repeat Simple_repeat 1 244 0 3 655 588 177 38 11 chr17 9280629 9280893 -85991758 + (TATG)n Simple_repeat Simple_repeat 1 271 0 3 655 439 246 45 0 chr17 9281080 9281190 -85991461 - B3A SINE B2 -83 115 1 3 655 192 217 0 0 chr17 9282008 9282054 -85990597 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 3 655 874 118 13 0 chr17 9282089 9282241 -85990410 + (TCCA)n Simple_repeat Simple_repeat 4 157 0 3 655 267 389 0 32 chr17 9282256 9282442 -85990209 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 3 655 246 232 27 55 chr17 9282957 9283030 -85989621 + B1_Mur1 SINE Alu 74 144 -5 3 655 202 219 0 30 chr17 9284713 9284779 -85987872 + CT-rich Low_complexity Low_complexity 2 65 0 3 655 873 221 29 39 chr17 9284779 9285090 -85987561 + RLTR15 LTR ERVK 1 308 -51 3 655 187 304 16 0 chr17 9285123 9285248 -85987403 + CT-rich Low_complexity Low_complexity 3 129 0 3 655 377 358 34 69 chr17 9285354 9285558 -85987093 + MTEa LTR MaLR 28 224 -155 3 655 25 0 0 0 chr17 9285891 9285916 -85986735 + AT_rich Low_complexity Low_complexity 1 25 0 3 655 1705 186 20 20 chr17 9285927 9286272 -85986379 - RLTR11A LTR ERVK -183 345 1 3 655 3309 226 42 5 chr17 9286871 9287521 -85985130 - Lx6 LINE L1 -1 7459 6786 3 655 516 170 104 52 chr17 9287526 9287726 -85984925 + RMER4B LTR ERVK 280 574 -11 3 655 647 214 14 14 chr17 9287739 9287886 -85984765 - MTC LTR MaLR -272 149 3 4 655 890 207 81 9 chr17 9287886 9288096 -85984555 + MTEa LTR MaLR 76 300 -79 4 655 414 0 0 0 chr17 9288633 9288679 -85983972 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 655 338 291 0 0 chr17 9289560 9289780 -85982871 + (TG)n Simple_repeat Simple_repeat 1 220 0 4 655 623 168 6 0 chr17 9289850 9290017 -85982634 + (TG)n Simple_repeat Simple_repeat 1 168 0 4 655 342 98 0 0 chr17 9290248 9290299 -85982352 + (TCCC)n Simple_repeat Simple_repeat 3 53 0 4 655 3104 31 3 0 chr17 9290753 9291109 -85981542 + IAPEY2_LTR LTR ERVK 1 357 0 4 655 418 316 118 58 chr17 9291132 9291548 -85981103 + L1MA7 LINE L1 5504 5944 -347 4 655 300 342 84 23 chr17 9291666 9291929 -85980722 + L1MA7 LINE L1 5930 6208 -83 4 655 203 200 0 0 chr17 9291950 9291985 -85980666 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 655 273 281 125 0 chr17 9292516 9292612 -85980039 + MER2 DNA MER2_type 87 194 -151 4 655 2078 165 70 25 chr17 9292612 9293015 -85979636 + MTC LTR MaLR 1 421 0 4 655 888 251 14 0 chr17 9294064 9294271 -85978380 - B3 SINE B2 -5 211 2 4 655 1239 56 0 0 chr17 9296454 9296614 -85976037 + (TTC)n Simple_repeat Simple_repeat 1 160 0 4 655 306 0 0 0 chr17 9297264 9297298 -85975353 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 655 669 104 17 17 chr17 9297468 9297585 -85975066 + B2_Mm2 SINE B2 76 192 -3 4 655 533 217 100 61 chr17 9297786 9298051 -85974600 - RLTR12B LTR ERVK -271 257 1 4 655 363 181 28 0 chr17 9298233 9298305 -85974346 + ID2 SINE ID 1 74 -9 4 655 245 338 0 0 chr17 9300587 9300667 -85971984 - L1ME2 LINE L1 -87 6077 5998 4 655 211 319 11 11 chr17 9301858 9301953 -85970698 + (CATATA)n Simple_repeat Simple_repeat 2 96 0 4 655 645 301 138 4 chr17 9302702 9302962 -85969689 - L1MC LINE L1 -2144 5738 5444 4 655 501 17 0 0 chr17 9303090 9303148 -85969503 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 655 970 341 98 30 chr17 9305146 9305760 -85966891 + Lx8 LINE L1 6779 7438 -35 4 655 417 39 0 0 chr17 9305760 9305811 -85966840 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 655 970 341 98 30 chr17 9305811 9305840 -85966811 + Lx8 LINE L1 7439 7466 -7 4 656 288 143 0 0 chr17 9307140 9307196 -85965455 + MTD LTR MaLR 241 296 -123 4 656 1603 181 20 155 chr17 9307196 9307462 -85965189 - ORR1C2 LTR MaLR 0 384 173 4 656 811 75 17 0 chr17 9307462 9307582 -85965069 + (GA)n Simple_repeat Simple_repeat 1 122 0 4 656 1603 181 20 155 chr17 9307582 9307754 -85964897 - ORR1C2 LTR MaLR -212 172 5 4 656 528 216 80 53 chr17 9307883 9308152 -85964499 - L1MC LINE L1 -831 5502 5227 4 656 795 120 23 0 chr17 9308159 9308334 -85964317 + (TATG)n Simple_repeat Simple_repeat 2 180 0 4 656 625 208 53 8 chr17 9308347 9308478 -85964173 - B1_Mur2 SINE Alu -10 139 3 4 656 25 31 0 0 chr17 9308549 9308581 -85964070 + AT_rich Low_complexity Low_complexity 1 32 0 4 656 1216 248 129 13 chr17 9308695 9309230 -85963421 - L1MC LINE L1 -2804 3342 2746 4 656 23 54 0 0 chr17 9309955 9309992 -85962659 + AT_rich Low_complexity Low_complexity 1 37 0 4 656 496 327 61 40 chr17 9310523 9310800 -85961851 - B4 SINE B4 -8 284 2 4 656 346 245 132 0 chr17 9312944 9313050 -85959601 + L1MC1 LINE L1 6007 6126 -207 4 656 522 0 0 0 chr17 9313143 9313201 -85959450 + (GA)n Simple_repeat Simple_repeat 1 58 0 4 656 312 27 0 0 chr17 9313635 9313672 -85958979 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 656 579 281 177 23 chr17 9314562 9314912 -85957739 - ERVL-E-int LTR ERVL -1336 4331 3928 4 656 255 31 0 0 chr17 9316592 9316624 -85956027 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 4 656 308 248 38 4 chr17 9317490 9317602 -85955049 - L1MB2 LINE L1 -7 6176 6046 4 656 803 159 14 29 chr17 9318135 9318632 -85954019 + CT-rich Low_complexity Low_complexity 1 489 0 4 656 322 269 148 7 chr17 9318633 9318768 -85953883 - HAL1-3A_ME LINE L1 -421 2437 2284 4 656 228 35 0 0 chr17 9318768 9318797 -85953854 + (TTCC)n Simple_repeat Simple_repeat 3 31 0 4 656 299 238 69 10 chr17 9318978 9319080 -85953571 - MER31A LTR ERV1 -368 117 10 4 656 353 332 67 67 chr17 9319157 9319180 -85953471 - B3 SINE B2 -6 210 187 4 656 228 67 0 0 chr17 9319180 9319210 -85953441 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 656 415 325 29 72 chr17 9319210 9319396 -85953255 - B3A SINE B2 -30 186 1 4 656 381 292 71 29 chr17 9320152 9320392 -85952259 - L1MA9 LINE L1 -10 6302 6053 4 656 414 0 0 0 chr17 9322134 9322180 -85950471 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 656 279 0 0 0 chr17 9322180 9322210 -85950441 + (GA)n Simple_repeat Simple_repeat 1 31 0 4 656 228 229 0 0 chr17 9322230 9322313 -85950338 + (TG)n Simple_repeat Simple_repeat 2 84 0 4 656 224 246 130 0 chr17 9322547 9322616 -85950035 - B4A SINE B4 -214 78 1 4 656 261 0 0 0 chr17 9323058 9323087 -85949564 + (T)n Simple_repeat Simple_repeat 1 29 0 4 656 793 187 243 14 chr17 9323692 9323959 -85948692 + RLTR11A LTR ERVK 1 295 -268 4 656 203 243 0 0 chr17 9323960 9323997 -85948654 + polypurine Low_complexity Low_complexity 3 39 0 4 656 1117 206 56 7 chr17 9323997 9324281 -85948370 + RLTR11A LTR ERVK 214 511 -17 4 656 446 0 0 18 chr17 9324291 9324346 -85948305 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 4 656 343 274 151 47 chr17 9324359 9324426 -85948225 + Lx8 LINE L1 7178 7258 -215 4 656 1268 251 78 9 chr17 9324426 9324772 -85947879 - ORR1D2 LTR MaLR 0 370 1 4 656 343 274 151 47 chr17 9324772 9324876 -85947775 + Lx8 LINE L1 7259 7367 -106 4 656 560 134 10 0 chr17 9326407 9326504 -85946147 + (TCCA)n Simple_repeat Simple_repeat 3 100 0 4 656 385 323 83 0 chr17 9326504 9326637 -85946014 - B1F SINE Alu -5 144 1 4 656 343 357 84 13 chr17 9326745 9326972 -85945679 - MER2 DNA MER2_type -1 344 102 4 656 228 67 0 0 chr17 9328269 9328299 -85944352 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 656 519 152 41 0 chr17 9329130 9329275 -85943376 + (TCTA)n Simple_repeat Simple_repeat 3 153 0 4 656 602 162 44 0 chr17 9329662 9329822 -85942829 + G-rich Low_complexity Low_complexity 1 167 0 4 656 22 80 0 0 chr17 9330520 9330570 -85942081 + AT_rich Low_complexity Low_complexity 1 50 0 4 656 709 144 15 0 chr17 9331729 9331861 -85940790 + GA-rich Low_complexity Low_complexity 1 134 0 4 656 3075 73 5 2 chr17 9332056 9332455 -85940196 - MTB LTR MaLR 0 400 1 4 656 887 289 117 27 chr17 9333022 9333133 -85939518 - L1MC3 LINE L1 -15 7770 7647 4 656 2001 168 8 36 chr17 9333133 9333517 -85939134 + ORR1D1 LTR MaLR 1 373 -1 4 656 887 289 117 27 chr17 9333517 9333960 -85938691 - L1MC3 LINE L1 -139 7646 7166 4 656 435 38 0 0 chr17 9336015 9336068 -85936583 + (TATG)n Simple_repeat Simple_repeat 2 54 0 4 656 695 98 8 24 chr17 9336634 9336760 -85935891 + (GGGA)n Simple_repeat Simple_repeat 3 126 0 4 656 22 35 0 0 chr17 9337796 9337825 -85934826 + AT_rich Low_complexity Low_complexity 1 29 0 4 656 1009 206 98 16 chr17 9338184 9338512 -85934139 + MTC LTR MaLR 20 421 0 4 656 297 311 13 135 chr17 9338517 9338673 -85933978 + MTE2a LTR MaLR 1 137 -242 4 656 620 324 46 28 chr17 9338715 9339042 -85933609 + MT2A LTR ERVL 201 533 0 4 656 3619 42 0 2 chr17 9339208 9339641 -85933010 + L1Md_F3 LINE L1 6153 6584 0 4 656 873 178 50 21 chr17 9339679 9339920 -85932731 + BGLII_B LTR ERVK 20 267 -174 4 656 993 214 13 61 chr17 9339906 9340219 -85932432 + RLTR11A LTR ERVK 214 511 -17 4 656 423 0 0 0 chr17 9340375 9340422 -85932229 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 4 656 244 250 17 0 chr17 9340451 9340511 -85932140 - RSINE1 SINE B4 -67 98 38 4 656 484 136 12 0 chr17 9341263 9341344 -85931307 - URR1B DNA MER1_type 0 225 144 4 656 233 29 29 0 chr17 9341347 9341381 -85931270 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 656 222 270 27 13 chr17 9342039 9342114 -85930537 + B1_Mur1 SINE Alu 67 142 -7 4 656 261 57 0 0 chr17 9342125 9342160 -85930491 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 656 642 187 20 54 chr17 9342244 9342391 -85930260 - URR1B DNA MER1_type -77 148 7 4 656 24 0 0 0 chr17 9342675 9342699 -85929952 + AT_rich Low_complexity Low_complexity 1 24 0 4 656 495 206 121 152 chr17 9343604 9343827 -85928824 + B3 SINE B2 1 216 0 4 656 536 315 98 44 chr17 9345939 9346696 -85925955 + L1MB7 LINE L1 5387 6184 0 4 656 602 272 11 56 chr17 9347332 9347511 -85925140 + B4A SINE B4 2 172 -120 4 656 1634 228 20 50 chr17 9348960 9349358 -85923293 + MTD LTR MaLR 18 403 -16 4 656 845 214 234 29 chr17 9350391 9350739 -85921912 - MTD LTR MaLR 0 419 1 4 656 755 117 0 0 chr17 9350954 9351065 -85921586 + Lx2 LINE L1 6538 6648 -349 4 656 1146 162 4 47 chr17 9351060 9351154 -85921497 + Lx2 LINE L1 6775 6866 -131 4 656 207 0 0 0 chr17 9351154 9351177 -85921474 + (TGGG)n Simple_repeat Simple_repeat 3 25 0 4 656 1146 162 4 47 chr17 9351177 9351315 -85921336 + Lx2 LINE L1 6867 6997 0 4 656 1356 99 41 124 chr17 9351329 9351669 -85920982 + RLTR1B LTR ERV1 47 436 -76 4 656 722 304 5 0 chr17 9352010 9352224 -85920427 + ID_B1 SINE B4 2 216 -8 4 656 21 0 0 0 chr17 9352316 9352337 -85920314 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 180 125 0 0 chr17 9352612 9352644 -85920007 + (C)n Simple_repeat Simple_repeat 1 32 0 4 656 622 222 111 50 chr17 9354027 9354226 -85918425 - B3 SINE B2 -5 211 1 4 656 559 209 39 39 chr17 9354508 9354538 -85918113 + ORR1D2-int LTR MaLR 584 613 -1350 4 656 3067 101 119 2 chr17 9354538 9355043 -85917608 + MT2B2 LTR ERVL 1 564 -20 4 656 967 254 145 15 chr17 9355419 9355743 -85916908 + ORR1D2 LTR MaLR 5 370 0 4 656 290 307 97 7 chr17 9355781 9355935 -85916716 - L1MCa LINE L1 -5242 1509 1342 4 656 570 98 0 0 chr17 9356010 9356092 -85916559 + (TG)n Simple_repeat Simple_repeat 1 82 0 4 656 1515 225 59 0 chr17 9356141 9356515 -85916136 + MTD LTR MaLR 5 400 -19 4 656 243 239 111 14 chr17 9357227 9357299 -85915352 - L1MCa LINE L1 -5894 151 73 4 656 651 224 80 42 chr17 9357318 9357556 -85915095 - RMER15 LTR ERVL 0 575 329 5 656 393 234 6 83 chr17 9357607 9357775 -85914876 - RMER15 LTR ERVL -420 155 1 5 656 252 0 0 0 chr17 9357981 9358009 -85914642 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 656 188 67 0 32 chr17 9358220 9358251 -85914400 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 5 656 1808 235 39 29 chr17 9358261 9358669 -85913982 - Lx5 LINE L1 -5 7045 6634 5 656 300 301 34 68 chr17 9359243 9359389 -85913262 - B1F1 SINE Alu -2 147 7 5 656 261 216 39 0 chr17 9359421 9359523 -85913128 + (CATATA)n Simple_repeat Simple_repeat 3 108 0 5 656 638 229 15 1 chr17 9361859 9361993 -85910658 + B1_Mur1 SINE Alu 3 136 -13 5 656 189 0 0 0 chr17 9361996 9362017 -85910634 + (CAAA)n Simple_repeat Simple_repeat 3 23 0 5 656 204 40 0 0 chr17 9363796 9363821 -85908830 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 5 656 495 157 0 0 chr17 9363959 9364048 -85908603 + (TG)n Simple_repeat Simple_repeat 2 90 0 5 656 707 310 171 33 chr17 9364569 9365259 -85907392 + L1M3e LINE L1 1326 2110 -4920 5 656 21 0 0 0 chr17 9365316 9365337 -85907314 + AT_rich Low_complexity Low_complexity 1 21 0 5 656 345 175 39 55 chr17 9365337 9365518 -85907133 + (TATAA)n Simple_repeat Simple_repeat 3 180 0 5 656 427 283 43 68 chr17 9365671 9365834 -85906817 + Lx7 LINE L1 6773 6931 -765 5 656 479 289 253 10 chr17 9365934 9366238 -85906413 + Lx8 LINE L1 7090 7467 -6 5 656 3370 145 170 0 chr17 9367021 9367633 -85905018 - RMER6D LTR ERVK -4 716 1 5 656 356 324 81 55 chr17 9367683 9367960 -85904691 + MLT1A0 LTR MaLR 59 377 -31 5 656 180 0 0 0 chr17 9367991 9368011 -85904640 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 656 635 286 145 27 chr17 9368019 9368051 -85904600 + L1MA8 LINE L1 5413 5444 -847 5 656 339 25 0 0 chr17 9368051 9368091 -85904560 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 656 712 269 177 32 chr17 9368091 9368815 -85903836 + L1MA8 LINE L1 5445 6289 -2 5 656 516 301 0 0 chr17 9368989 9369132 -85903519 - B1F SINE Alu 0 149 7 5 656 2566 88 12 0 chr17 9370214 9370556 -85902095 - ORR1A1 LTR MaLR 0 346 1 5 656 216 0 0 0 chr17 9370603 9370627 -85902024 + (T)n Simple_repeat Simple_repeat 1 24 0 5 656 3300 59 2 2 chr17 9371356 9371763 -85900888 - MTB_Mm LTR MaLR 0 407 1 5 656 245 75 0 24 chr17 9371794 9371835 -85900816 + (CTAA)n Simple_repeat Simple_repeat 3 42 0 5 656 333 0 0 0 chr17 9371959 9371996 -85900655 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 656 225 0 0 0 chr17 9372264 9372289 -85900362 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 656 617 161 153 7 chr17 9373958 9374108 -85898543 + MTD LTR MaLR 243 414 -5 5 656 317 194 17 27 chr17 9375028 9375104 -85897547 + ID4 SINE ID 1 70 -82 5 656 226 208 0 0 chr17 9375126 9375174 -85897477 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 656 230 0 33 0 chr17 9375332 9375362 -85897289 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 5 656 1152 271 115 46 chr17 9375365 9375755 -85896896 - Lx5 LINE L1 -16 7034 6618 5 656 357 252 204 8 chr17 9375803 9375935 -85896716 - RSINE1 SINE B4 -6 159 2 5 656 316 281 22 0 chr17 9376106 9376195 -85896456 - Tigger5 DNA MER2_type -49 2357 2267 5 656 384 245 54 54 chr17 9376223 9376370 -85896281 - Tigger5 DNA MER2_type -90 2316 2170 5 656 232 254 18 126 chr17 9376509 9376676 -85895975 - L1MEc LINE L1 -2369 4168 4020 5 656 353 259 151 50 chr17 9376810 9377127 -85895524 - L1MEc LINE L1 -3934 2684 2336 5 656 269 294 40 47 chr17 9377132 9377282 -85895369 - L1MEc LINE L1 -4681 1952 1804 5 656 1048 173 137 0 chr17 9377735 9377932 -85894719 + URR1B DNA MER1_type 2 225 0 5 656 230 348 0 14 chr17 9379947 9380017 -85892634 + ID4_ SINE ID 4 72 -11 5 656 1170 267 79 0 chr17 9380168 9380498 -85892153 - ORR1D2 LTR MaLR 0 370 15 5 656 2648 89 47 27 chr17 9381696 9382099 -85890552 + RLTR10A LTR ERVK 1 411 0 5 656 2383 66 119 11 chr17 9385251 9385603 -85887048 + RLTR10 LTR ERVK 1 390 0 5 656 5897 38 9 3 chr17 9385603 9386296 -85886355 + RLTR10-int LTR ERVK 302 998 -989 5 656 373 271 31 8 chr17 9386360 9386490 -85886161 + RLTR10-int LTR ERVK 1462 1594 -5987 5 656 8882 22 0 4 chr17 9386572 9387571 -85885080 + RLTR10-int LTR ERVK 990 1984 -3 5 656 2383 66 119 11 chr17 9387573 9387925 -85884726 + RLTR10 LTR ERVK 1 390 0 5 656 219 36 0 0 chr17 9389180 9389208 -85883443 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 5 656 225 169 32 48 chr17 9391030 9391092 -85881559 + (CAGA)n Simple_repeat Simple_repeat 1 61 0 5 656 1896 181 60 3 chr17 9392229 9392579 -85880072 + ORR1D1 LTR MaLR 5 374 0 5 656 466 324 0 14 chr17 9392687 9392828 -85879823 + ID_B1 SINE B4 81 219 -5 5 656 332 311 221 0 chr17 9392874 9392996 -85879655 + RSINE1 SINE B4 4 152 -13 5 656 345 100 0 0 chr17 9393868 9393918 -85878733 + (TTTC)n Simple_repeat Simple_repeat 1 50 0 5 656 438 36 0 0 chr17 9393909 9393965 -85878686 + (TTCCC)n Simple_repeat Simple_repeat 1 56 0 5 656 4473 89 5 14 chr17 9393965 9394600 -85878051 - L1_Mus3 LINE L1 -1 6637 6009 5 656 182 208 0 20 chr17 9394726 9394775 -85877876 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 656 254 167 17 0 chr17 9396448 9396508 -85876143 + (TCCA)n Simple_repeat Simple_repeat 4 64 0 5 656 1081 120 23 9 chr17 9396533 9396877 -85875774 + (TCCA)n Simple_repeat Simple_repeat 1 348 0 5 656 266 227 104 83 chr17 9399229 9399325 -85873326 + B1F2 SINE Alu 1 98 -51 5 656 231 211 0 19 chr17 9399503 9399556 -85873095 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 656 385 154 41 14 chr17 9399588 9399733 -85872918 + (CA)n Simple_repeat Simple_repeat 2 150 0 5 656 603 0 0 0 chr17 9399752 9399819 -85872832 + (TC)n Simple_repeat Simple_repeat 2 68 0 5 656 636 250 94 0 chr17 9400500 9400660 -85871991 + MTEa LTR MaLR 13 187 -192 5 656 229 218 322 0 chr17 9400694 9400781 -85871870 + MTEa LTR MaLR 263 377 -2 5 656 200 59 29 0 chr17 9400781 9400815 -85871836 + (CAAA)n Simple_repeat Simple_repeat 4 38 0 5 656 360 250 9 18 chr17 9401173 9401287 -85871364 + MTEa LTR MaLR 18 130 -289 5 656 4795 66 12 0 chr17 9401290 9402192 -85870459 - L1_Mus1 LINE L1 -381 6186 5273 5 656 2986 54 3 0 chr17 9402192 9402564 -85870087 + L1_Mus1 LINE L1 6195 6567 0 5 656 181 246 158 0 chr17 9402757 9402814 -85869837 + L3 LINE CR1 2135 2200 -2289 5 656 25 51 0 0 chr17 9403117 9403156 -85869495 + AT_rich Low_complexity Low_complexity 1 39 0 5 656 387 0 0 0 chr17 9403192 9403235 -85869416 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 656 418 290 123 6 chr17 9404007 9404201 -85868450 + MTEa LTR MaLR 121 336 -43 5 656 263 274 29 19 chr17 9404274 9404378 -85868273 - Ricksha_c DNA MuDR -1664 384 280 5 656 347 304 315 9 chr17 9405090 9405432 -85867219 - ERVL-int LTR ERVL -669 5045 4600 5 656 267 243 14 0 chr17 9405709 9405783 -85866868 - ERVL-int LTR ERVL -1743 4014 3940 5 656 678 285 46 53 chr17 9405834 9406097 -85866554 - MTD LTR MaLR -155 264 4 5 656 404 116 30 50 chr17 9406362 9406373 -85866278 - Lx3A LINE L1 -3 6978 6968 5 656 225 0 0 0 chr17 9406373 9406398 -85866253 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 5 656 404 116 30 50 chr17 9406398 9406486 -85866165 - Lx3A LINE L1 -14 6967 6882 5 656 1317 144 6 15 chr17 9406486 9406730 -85865921 + Lx3_Mus LINE L1 5755 6023 -274 5 656 521 125 11 0 chr17 9406730 9406818 -85865833 + (GAAA)n Simple_repeat Simple_repeat 1 89 0 5 656 5200 93 4 6 chr17 9406819 9407543 -85865108 + Lx3_Mus LINE L1 5911 6633 -376 5 656 439 263 67 0 chr17 9407597 9407756 -85864895 - ERVL-int LTR ERVL -1880 3877 3681 5 656 346 255 70 107 chr17 9407821 9408063 -85864588 + B4 SINE B4 1 233 -59 5 656 411 226 0 0 chr17 9408140 9408242 -85864409 + (TAGA)n Simple_repeat Simple_repeat 1 102 0 5 656 539 14 43 0 chr17 9408271 9408341 -85864310 + (CATATA)n Simple_repeat Simple_repeat 2 74 0 5 656 981 178 47 86 chr17 9409075 9409309 -85863342 - URR1B DNA MER1_type 0 225 1 5 656 417 54 0 0 chr17 9409347 9409403 -85863248 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 656 374 376 36 9 chr17 9410067 9410287 -85862364 + L1MCc LINE L1 213 438 -5985 5 656 395 106 15 0 chr17 9411050 9411116 -85861535 + (GGGA)n Simple_repeat Simple_repeat 3 69 0 5 656 862 272 54 36 chr17 9411243 9411521 -85861130 - MTE2a LTR MaLR -14 365 83 5 656 1015 274 43 61 chr17 9411524 9411916 -85860735 + Lx8 LINE L1 6936 7320 -153 5 656 1591 242 35 5 chr17 9412868 9413267 -85859384 + MTD LTR MaLR 1 411 -8 5 656 324 0 0 0 chr17 9413623 9413659 -85858992 + (TTCA)n Simple_repeat Simple_repeat 2 37 0 5 656 910 287 90 3 chr17 9413660 9413961 -85858690 - MTE-int LTR MaLR -1080 500 174 5 656 767 270 21 5 chr17 9413963 9414153 -85858498 - Lx9 LINE L1 -986 6658 6466 5 656 225 0 0 0 chr17 9414867 9414892 -85857759 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 5 656 363 183 0 0 chr17 9414908 9414990 -85857661 + (CA)n Simple_repeat Simple_repeat 1 82 0 5 656 396 0 0 0 chr17 9415216 9415260 -85857391 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 656 231 36 0 0 chr17 9415260 9415288 -85857363 + (CCA)n Simple_repeat Simple_repeat 2 29 0 5 656 192 152 0 0 chr17 9415291 9415324 -85857327 + (TCG)n Simple_repeat Simple_repeat 2 34 0 5 656 1274 267 84 14 chr17 9416757 9417243 -85855408 - Lx9 LINE L1 -7 7637 7118 5 656 233 171 15 89 chr17 9419048 9419183 -85853468 + (TATATG)n Simple_repeat Simple_repeat 6 130 0 5 656 201 303 0 0 chr17 9419216 9419338 -85853313 + (TG)n Simple_repeat Simple_repeat 1 122 0 5 656 332 304 0 37 chr17 9419384 9419466 -85853185 - RSINE1 SINE B4 -2 163 85 5 656 22 0 0 0 chr17 9419643 9419665 -85852986 + AT_rich Low_complexity Low_complexity 1 22 0 5 656 243 0 0 0 chr17 9420738 9420765 -85851886 + (A)n Simple_repeat Simple_repeat 1 27 0 5 656 486 292 45 40 chr17 9420831 9421031 -85851620 + L1MEg LINE L1 50 250 -5834 5 656 315 224 174 13 chr17 9421661 9421810 -85850841 + L1MEg LINE L1 823 995 -5089 5 656 290 239 77 61 chr17 9421982 9422178 -85850473 + L1MEg LINE L1 1041 1239 -4845 5 656 2016 113 16 3 chr17 9422559 9422869 -85849782 + ORR1A2 LTR MaLR 6 319 -8 5 656 223 297 11 0 chr17 9423660 9423835 -85848816 + (CA)n Simple_repeat Simple_repeat 2 178 0 5 656 548 281 62 18 chr17 9425476 9425701 -85846950 - Lx8 LINE L1 -941 6532 6298 5 656 1232 188 76 19 chr17 9425701 9426105 -85846546 + MT2B LTR ERVL 6 491 -110 5 656 857 95 7 0 chr17 9426122 9426269 -85846382 + (GA)n Simple_repeat Simple_repeat 1 148 0 5 656 248 236 91 0 chr17 9426270 9426325 -85846326 - Lx8 LINE L1 -1160 6313 6254 5 656 225 203 32 48 chr17 9426831 9426893 -85845758 + L1M5 LINE L1 4635 4695 -1451 5 656 318 277 78 72 chr17 9427465 9427632 -85845019 - MER20B DNA MER1_type -294 489 322 6 656 231 302 92 8 chr17 9428993 9429123 -85843528 + MLT1D LTR MaLR 247 387 -118 6 656 757 224 0 0 chr17 9430562 9430705 -85841946 + B3 SINE B2 3 145 -71 6 656 342 161 0 0 chr17 9431283 9431376 -85841275 + C-rich Low_complexity Low_complexity 1 93 0 6 656 3463 5 0 0 chr17 9431510 9431890 -85840761 + L1Md_A LINE L1 6203 6582 0 6 656 25 0 0 0 chr17 9431906 9431931 -85840720 + AT_rich Low_complexity Low_complexity 1 25 0 6 656 716 202 11 14 chr17 9432003 9432284 -85840367 + (TATG)n Simple_repeat Simple_repeat 1 280 0 6 656 3039 232 16 5 chr17 9434169 9434797 -85837854 + Lx9 LINE L1 6694 7328 -316 6 656 2642 168 94 4 chr17 9434792 9435258 -85837393 - Lx5 LINE L1 -194 6856 6349 6 656 790 204 40 6 chr17 9435258 9435431 -85837220 + Lx5 LINE L1 6869 7047 -3 6 656 888 215 161 3 chr17 9435449 9435734 -85836917 + Lx9 LINE L1 7315 7644 0 6 656 484 336 53 18 chr17 9435771 9435998 -85836653 - Lx8 LINE L1 -792 6681 6447 6 657 348 111 0 0 chr17 9437712 9437766 -85834885 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 657 425 229 19 0 chr17 9438679 9438784 -85833867 - RMER1C Other Other -1 1341 1235 6 657 2124 251 61 47 chr17 9438797 9439523 -85833128 - RMER1C Other Other -360 982 43 6 657 229 278 69 0 chr17 9439865 9439937 -85832714 - L1M5 LINE L1 -729 5465 5389 6 657 632 263 102 163 chr17 9441130 9441534 -85831117 + MTE2a LTR MaLR 1 379 0 6 657 417 88 12 24 chr17 9441935 9442017 -85830634 + (TG)n Simple_repeat Simple_repeat 2 82 0 6 657 4958 94 4 0 chr17 9442743 9443431 -85829220 - L1_Mm LINE L1 -1096 4787 4097 6 657 261 313 152 7 chr17 9443431 9443708 -85828943 + MLT1B LTR MaLR 28 344 -46 6 657 466 295 149 22 chr17 9444369 9444691 -85827960 + L1MEc LINE L1 2092 2454 -3946 6 657 396 203 491 42 chr17 9446883 9447030 -85825621 + B3 SINE B2 3 215 -1 6 657 486 0 0 0 chr17 9447143 9447197 -85825454 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 657 378 356 39 68 chr17 9447448 9447593 -85825058 + ID_B1 SINE B4 12 163 -61 6 657 2759 152 54 10 chr17 9447593 9448092 -85824559 - RLTR28 LTR ERVL -2 522 2 6 657 378 356 39 68 chr17 9448092 9448151 -85824500 + ID_B1 SINE B4 164 210 -14 6 657 1010 200 159 17 chr17 9448769 9449059 -85823592 + ORR1D2 LTR MaLR 16 346 -24 6 657 434 291 76 32 chr17 9449808 9450085 -85822566 - B4A SINE B4 -3 289 1 6 657 1191 61 0 7 chr17 9450494 9450643 -85822008 - B1_Mus1 SINE Alu 0 148 1 6 657 388 254 34 34 chr17 9450645 9450763 -85821888 - PB1D7 SINE Alu -2 118 1 6 657 1288 165 38 12 chr17 9450931 9451171 -85821480 - Lx2B LINE L1 -8 6992 6747 6 657 852 266 90 28 chr17 9452982 9453272 -85819379 - MTE2b LTR MaLR 0 379 72 6 657 246 167 0 0 chr17 9453274 9453322 -85819329 + Lx8 LINE L1 7423 7470 -3 6 657 410 267 0 0 chr17 9453355 9453441 -85819210 - MTE2b LTR MaLR -291 88 3 6 657 370 294 58 22 chr17 9453776 9453915 -85818736 + MTEa LTR MaLR 3 146 -233 6 657 286 301 136 72 chr17 9453915 9454243 -85818408 + MT2A LTR ERVL 3 534 -28 6 657 420 224 21 7 chr17 9454348 9454492 -85818159 + CT-rich Low_complexity Low_complexity 6 151 0 6 657 2564 322 67 22 chr17 9454650 9455810 -85816841 - Lx8 LINE L1 -45 7428 6216 6 657 207 88 0 0 chr17 9456971 9457005 -85815646 + (T)n Simple_repeat Simple_repeat 1 34 0 6 657 279 321 18 9 chr17 9457854 9457967 -85814684 - PB1D10 SINE Alu -1 116 3 6 657 589 299 5 57 chr17 9458516 9458725 -85813926 - B3A SINE B2 0 198 1 6 657 507 148 0 0 chr17 9458755 9458843 -85813808 + (CA)n Simple_repeat Simple_repeat 2 89 0 6 657 710 313 30 10 chr17 9459547 9459850 -85812801 + Lx9 LINE L1 7209 7517 -127 6 657 249 180 0 0 chr17 9459884 9459934 -85812717 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 657 332 160 10 0 chr17 9460052 9460152 -85812499 + (TA)n Simple_repeat Simple_repeat 1 101 0 6 657 1999 178 63 13 chr17 9460550 9460948 -85811703 + MTC LTR MaLR 4 421 0 6 657 437 298 150 79 chr17 9461228 9461582 -85811069 + MTEa LTR MaLR 1 379 0 6 657 283 74 18 36 chr17 9462386 9462442 -85810209 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 6 657 418 303 26 0 chr17 9462462 9462617 -85810034 + Lx9 LINE L1 7197 7355 -289 6 657 1033 257 73 75 chr17 9462928 9463395 -85809256 - RMER13A LTR ERVK -394 466 1 6 657 186 43 0 0 chr17 9463482 9463505 -85809146 + (TA)n Simple_repeat Simple_repeat 2 24 0 6 657 784 297 98 53 chr17 9463701 9464057 -85808594 - MTE2b LTR MaLR -6 373 2 6 657 1854 74 0 0 chr17 9464340 9464596 -85808055 + ORR1A2 LTR MaLR 1 256 -71 6 657 489 34 0 0 chr17 9466525 9466584 -85806067 + (TCC)n Simple_repeat Simple_repeat 3 61 0 6 657 505 264 131 6 chr17 9466652 9466827 -85805824 - B3A SINE B2 0 198 2 6 657 78 22 0 0 chr17 9467052 9467144 -85805507 + AT_rich Low_complexity Low_complexity 1 92 0 6 657 4464 98 5 25 chr17 9467784 9468626 -85804025 - RLTR13D2 LTR ERVK 0 1023 1 6 657 281 183 29 9 chr17 9470142 9470247 -85802404 + (TA)n Simple_repeat Simple_repeat 2 108 0 6 657 463 242 101 38 chr17 9470257 9470416 -85802235 - MLT1F2-int LTR MaLR -776 595 427 6 657 237 117 16 32 chr17 9470524 9470586 -85802065 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 657 703 119 17 28 chr17 9470607 9470788 -85801863 + (TG)n Simple_repeat Simple_repeat 2 180 0 6 657 4146 98 26 53 chr17 9470972 9471728 -85800923 + RMER17A LTR ERVK 1 736 -15 6 657 239 300 28 91 chr17 9472070 9472246 -85800405 - MLT1F2 LTR MaLR -279 281 117 6 657 316 0 45 0 chr17 9473807 9473851 -85798800 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 6 657 922 217 39 0 chr17 9473879 9474086 -85798565 - B3 SINE B2 -1 215 1 6 657 388 300 67 74 chr17 9474233 9474517 -85798134 - Lx8 LINE L1 0 7473 7192 6 657 1176 230 132 11 chr17 9475399 9475748 -85796903 + MTD LTR MaLR 20 419 0 6 657 2029 179 48 5 chr17 9475757 9476149 -85796502 + MTC LTR MaLR 5 413 -8 6 657 1287 207 10 126 chr17 9476148 9476280 -85796371 + MTC-int LTR MaLR 93 219 -1039 6 657 1187 62 0 0 chr17 9476280 9476426 -85796225 + B1_Mus2 SINE Alu 2 147 0 6 657 1287 207 10 126 chr17 9476426 9476691 -85795960 + MTC-int LTR MaLR 220 444 -814 6 657 1578 182 97 6 chr17 9476694 9477054 -85795597 + MTC-int LTR MaLR 866 1258 0 6 657 2067 178 55 5 chr17 9477054 9477454 -85795197 + MTC LTR MaLR 1 420 -1 6 657 731 154 7 0 chr17 9478178 9478314 -85794337 + (TA)n Simple_repeat Simple_repeat 1 137 0 6 657 542 159 0 9 chr17 9479104 9479212 -85793439 + (TA)n Simple_repeat Simple_repeat 2 108 0 6 657 260 216 11 112 chr17 9479604 9479701 -85792950 + ID4 SINE ID 1 92 -60 6 657 738 279 19 24 chr17 9479798 9480011 -85792640 - B3 SINE B2 -4 212 1 6 657 225 0 0 0 chr17 9480013 9480038 -85792613 + (T)n Simple_repeat Simple_repeat 1 25 0 6 657 402 21 0 0 chr17 9480934 9480981 -85791670 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 657 826 174 4 0 chr17 9481863 9482334 -85790317 + (CA)n Simple_repeat Simple_repeat 1 473 0 6 657 258 222 0 32 chr17 9482337 9482430 -85790221 + GA-rich Low_complexity Low_complexity 2 91 0 6 657 273 125 0 0 chr17 9482653 9482709 -85789942 + (T)n Simple_repeat Simple_repeat 1 56 0 6 657 2350 124 7 53 chr17 9483534 9483951 -85788700 + RMER10B LTR ERVL 1 398 0 6 657 1067 231 67 0 chr17 9486484 9486753 -85785898 + ORR1D2 LTR MaLR 3 289 -81 6 657 1400 247 40 11 chr17 9486763 9487135 -85785516 + MTD LTR MaLR 1 383 -36 6 657 243 246 0 55 chr17 9487140 9487213 -85785438 - RMER15 LTR ERVL -96 479 411 6 657 399 285 53 15 chr17 9487571 9487703 -85784948 - ORR1E LTR MaLR -222 137 1 6 657 246 218 96 43 chr17 9487725 9487840 -85784811 - Lx8 LINE L1 0 7473 7353 6 657 2172 173 19 56 chr17 9487961 9488077 -85784574 - MTC LTR MaLR -8 413 302 6 657 3495 55 34 42 chr17 9488077 9488555 -85784096 + L1_Mus1 LINE L1 6094 6567 0 6 657 2172 173 19 56 chr17 9488555 9488866 -85783785 - MTC LTR MaLR -120 301 2 6 657 310 284 0 64 chr17 9488866 9488960 -85783691 - Lx8 LINE L1 -347 7126 7039 6 657 263 252 120 6 chr17 9489016 9489196 -85783455 - L1M5 LINE L1 -758 5388 5182 6 657 282 319 20 69 chr17 9489621 9489722 -85782929 - B4 SINE B4 -2 290 195 6 657 267 344 55 47 chr17 9489813 9490066 -85782585 - L1M5 LINE L1 -1103 5043 4789 6 657 315 271 128 81 chr17 9490133 9490430 -85782221 - L1M5 LINE L1 -1486 4660 4350 6 657 641 235 133 0 chr17 9490615 9490811 -85781840 - MTD LTR MaLR 0 419 198 6 657 462 264 70 30 chr17 9491534 9491733 -85780918 - L1MC1 LINE L1 -215 6118 5912 6 657 778 239 27 72 chr17 9492085 9492378 -85780273 - B4A SINE B4 -12 280 1 6 657 189 0 0 0 chr17 9494134 9494155 -85778496 + (T)n Simple_repeat Simple_repeat 1 21 0 6 657 391 169 0 33 chr17 9494890 9494982 -85777669 + C-rich Low_complexity Low_complexity 6 94 0 6 657 363 138 103 0 chr17 9495210 9495268 -85777383 + Lx5 LINE L1 6203 6266 -784 6 657 465 345 29 29 chr17 9495264 9495437 -85777214 + Lx5 LINE L1 6832 7004 -46 6 657 21 0 0 0 chr17 9496082 9496103 -85776548 + AT_rich Low_complexity Low_complexity 1 21 0 6 657 265 159 16 16 chr17 9496114 9496178 -85776473 + (TA)n Simple_repeat Simple_repeat 2 65 0 6 657 239 114 0 0 chr17 9496377 9496421 -85776230 + Lx2A LINE L1 6965 7008 0 6 657 1198 106 119 20 chr17 9496472 9496674 -85775977 + URR1A DNA MER1_type 5 226 0 6 657 443 251 36 24 chr17 9496716 9496883 -85775768 - L1MD LINE L1 -3202 2944 2776 6 657 2670 112 48 21 chr17 9497004 9497440 -85775211 + Lx2A LINE L1 6561 7008 0 6 657 401 0 20 0 chr17 9498004 9498053 -85774598 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 657 257 224 0 20 chr17 9499469 9499569 -85773082 + (TATG)n Simple_repeat Simple_repeat 4 101 0 6 657 249 313 95 9 chr17 9499571 9499687 -85772964 - RSINE1 SINE B4 -1 164 39 6 657 453 342 45 6 chr17 9499755 9499911 -85772740 - RSINE1 SINE B4 -2 163 2 6 657 386 298 67 76 chr17 9500566 9500882 -85771769 - L1M2 LINE L1 -1611 4269 3957 1 657 736 319 72 27 chr17 9501005 9501379 -85771272 - L1M2 LINE L1 -2130 4013 3623 1 657 1541 251 65 0 chr17 9501386 9501740 -85770911 + MTE2b LTR MaLR 3 379 0 2 657 616 319 110 35 chr17 9501785 9502419 -85770232 - L1M2 LINE L1 -2587 3556 2875 1 657 996 132 58 6 chr17 9502455 9502646 -85770005 + RMER6A LTR ERVK 74 293 -397 3 657 1708 118 31 4 chr17 9502647 9502902 -85769749 + Lx2 LINE L1 6736 6997 0 4 657 28 0 0 0 chr17 9503178 9503206 -85769445 + AT_rich Low_complexity Low_complexity 1 28 0 5 657 1054 266 204 15 chr17 9504017 9504341 -85768310 + MTD LTR MaLR 1 385 -34 6 657 195 42 0 0 chr17 9504840 9504864 -85767787 + (TG)n Simple_repeat Simple_repeat 2 25 0 7 657 301 226 91 45 chr17 9505489 9505577 -85767074 + B1_Mur1 SINE Alu 58 149 0 8 657 184 137 39 0 chr17 9505918 9505969 -85766682 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 9 657 726 114 18 31 chr17 9506065 9506228 -85766423 + (TCTA)n Simple_repeat Simple_repeat 2 162 0 1 657 257 377 0 0 chr17 9506252 9506366 -85766285 - PB1D10 SINE Alu -1 116 3 1 657 626 263 22 0 chr17 9506589 9506726 -85765925 + B1F SINE Alu 1 140 -9 1 657 3956 118 45 9 chr17 9507512 9508085 -85764566 - Lx LINE L1 -5 6649 6056 1 657 3720 68 10 4 chr17 9508085 9508593 -85764058 + Lx LINE L1 5554 6064 -590 1 657 1060 225 196 42 chr17 9508886 9509239 -85763412 - MTD LTR MaLR -12 407 1 1 657 188 250 143 48 chr17 9510035 9510119 -85762532 - L2b LINE L2 -1 3374 3283 1 657 33 43 0 0 chr17 9510702 9510749 -85761902 + AT_rich Low_complexity Low_complexity 1 47 0 1 657 435 38 0 0 chr17 9510894 9510947 -85761704 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 657 184 231 0 0 chr17 9510984 9511023 -85761628 + L3 LINE CR1 1292 1330 -3159 1 657 673 93 19 0 chr17 9511653 9511760 -85760891 + (TC)n Simple_repeat Simple_repeat 2 110 0 1 657 414 114 0 0 chr17 9511809 9511888 -85760763 + (TCTG)n Simple_repeat Simple_repeat 2 80 0 2 657 281 184 102 11 chr17 9512155 9512243 -85760408 - L1MC4a LINE L1 0 7882 7787 2 657 701 323 91 28 chr17 9512475 9512946 -85759705 - L1MB7 LINE L1 -14 6170 5670 2 657 396 0 0 0 chr17 9516330 9516374 -85756277 + (TA)n Simple_repeat Simple_repeat 1 44 0 2 657 262 254 0 0 chr17 9517233 9517296 -85755355 + L1M5 LINE L1 5749 5811 -368 2 657 351 299 70 44 chr17 9517917 9518010 -85754641 + CYRA11_Mm Unknown Y-chromosome 75 173 -444 2 657 849 150 14 0 chr17 9518010 9518157 -85754494 - URR1A DNA MER1_type 0 226 78 2 657 266 350 77 11 chr17 9518196 9518378 -85754273 + MLT1D LTR MaLR 304 497 -8 2 657 302 330 133 10 chr17 9519457 9519653 -85752998 - MLT1N2 LTR MaLR -16 546 327 2 657 24 53 0 0 chr17 9520918 9520956 -85751695 + AT_rich Low_complexity Low_complexity 1 38 0 2 657 603 147 0 0 chr17 9521362 9521464 -85751187 + (TG)n Simple_repeat Simple_repeat 2 103 0 3 657 366 23 0 0 chr17 9521465 9521508 -85751143 + (GA)n Simple_repeat Simple_repeat 2 44 0 3 657 235 186 58 0 chr17 9522454 9522540 -85750111 + (TA)n Simple_repeat Simple_repeat 1 91 0 3 657 1031 281 78 25 chr17 9522956 9523351 -85749300 + Lx8 LINE L1 6973 7388 -85 3 657 746 75 56 0 chr17 9523445 9523552 -85749099 - B1_Mus1 SINE Alu -35 113 1 3 657 280 190 59 6 chr17 9523880 9524049 -85748602 + (CA)n Simple_repeat Simple_repeat 2 179 0 3 657 419 135 46 29 chr17 9524098 9524273 -85748378 + (CA)n Simple_repeat Simple_repeat 1 178 0 3 657 402 31 47 0 chr17 9524480 9524544 -85748107 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 657 243 275 92 28 chr17 9524593 9524735 -85747916 + L1MD2 LINE L1 6079 6229 -130 3 657 1324 73 43 38 chr17 9524792 9524977 -85747674 + B2_Mm1a SINE B2 1 186 -7 3 657 239 250 103 81 chr17 9525568 9525655 -85746996 + MT2B LTR ERVL 153 241 -360 3 657 485 320 57 0 chr17 9525584 9525706 -85746945 + ID_B1 SINE B4 87 215 -9 4 657 666 282 76 40 chr17 9525781 9526058 -85746593 + MER2 DNA MER2_type 1 287 -58 4 657 396 0 0 0 chr17 9526357 9526401 -85746250 + (CAA)n Simple_repeat Simple_repeat 2 45 0 4 657 311 185 44 44 chr17 9526617 9526685 -85745966 + HAL1-3A_ME LINE L1 1963 2030 -828 4 657 330 204 0 0 chr17 9526685 9526783 -85745868 + (CA)n Simple_repeat Simple_repeat 2 99 0 4 657 354 120 0 0 chr17 9526783 9526833 -85745818 + HAL1-3A_ME LINE L1 1976 2025 -833 4 657 375 141 0 0 chr17 9527091 9527155 -85745496 + (CA)n Simple_repeat Simple_repeat 2 65 0 4 657 213 295 0 0 chr17 9527376 9527437 -85745214 + (CATATA)n Simple_repeat Simple_repeat 3 63 0 4 657 24 0 0 0 chr17 9527540 9527564 -85745087 + AT_rich Low_complexity Low_complexity 1 24 0 4 657 26 0 0 0 chr17 9527587 9527613 -85745038 + AT_rich Low_complexity Low_complexity 1 26 0 4 657 24 0 0 0 chr17 9527804 9527828 -85744823 + AT_rich Low_complexity Low_complexity 1 24 0 5 657 249 264 106 26 chr17 9528154 9528267 -85744384 + L1M5 LINE L1 2662 2783 -3363 5 657 1840 142 76 15 chr17 9529888 9530216 -85742435 - ORR1B1 LTR MaLR -8 386 39 5 657 910 261 10 24 chr17 9531313 9531521 -85741130 + B3 SINE B2 2 206 -10 5 657 993 288 0 5 chr17 9532298 9532511 -85740140 - B3 SINE B2 -4 212 1 5 657 271 75 25 0 chr17 9533413 9533453 -85739198 - MT2B LTR ERVL -2 582 542 5 657 278 159 64 47 chr17 9533459 9533631 -85739020 + (TA)n Simple_repeat Simple_repeat 2 176 0 5 657 35 41 0 0 chr17 9533659 9533708 -85738943 + AT_rich Low_complexity Low_complexity 1 49 0 5 657 1694 143 38 3 chr17 9533710 9533997 -85738654 - MT2B LTR ERVL -47 554 258 5 657 740 160 0 23 chr17 9533984 9534112 -85738539 - MT2B LTR ERVL -476 125 1 5 657 675 307 73 19 chr17 9536919 9537294 -85735357 + MLT2B4 LTR ERVL 1 412 -2 5 657 624 146 67 30 chr17 9537431 9537525 -85735126 + L1_Mm LINE L1 5044 5137 -746 5 657 1184 62 7 7 chr17 9537525 9537671 -85734980 + B1_Mm SINE Alu 2 147 0 6 657 624 146 67 30 chr17 9537671 9537710 -85734941 + L1_Mm LINE L1 5138 5182 -701 5 657 4211 100 7 0 chr17 9537717 9538307 -85734344 + L1_Mm LINE L1 5114 5685 -198 6 657 38995 41 0 3 chr17 9538310 9544544 -85728107 - L1Md_T LINE L1 0 6585 271 6 657 7523 47 0 1 chr17 9544545 9545443 -85727208 + L1_Mus1 LINE L1 5671 6567 0 6 657 213 65 0 0 chr17 9546074 9546105 -85726546 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 6 657 520 220 25 97 chr17 9547521 9547714 -85724937 - B3 SINE B2 -7 191 7 6 657 912 254 5 0 chr17 9548346 9548543 -85724108 - URR1B DNA MER1_type -27 198 1 6 657 426 268 63 35 chr17 9548762 9548905 -85723746 + ID_B1 SINE B4 78 224 0 6 657 3103 78 5 12 chr17 9549994 9550396 -85722255 + L1_Mus2 LINE L1 6166 6564 -2 6 657 297 297 115 86 chr17 9550511 9550824 -85721827 - MLT1A1 LTR MaLR -86 322 1 6 657 258 284 15 0 chr17 9551459 9551526 -85721125 - MLT1A1 LTR MaLR -16 392 325 7 657 2117 24 52 0 chr17 9551526 9551777 -85720874 + L1Md_F2 LINE L1 5322 5585 -298 7 657 8535 45 9 8 chr17 9551778 9552773 -85719878 + L1Md_F2 LINE L1 5587 6582 0 7 657 233 361 111 40 chr17 9552780 9552979 -85719672 - MLT1A1 LTR MaLR -67 341 129 7 657 630 112 46 18 chr17 9553243 9553352 -85719299 - ORR1A1 LTR MaLR 0 346 235 7 657 1238 137 33 5 chr17 9553885 9554069 -85718582 - B2_Mm2 SINE B2 -6 189 1 7 657 285 75 0 0 chr17 9554162 9554202 -85718449 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 657 200 365 9 0 chr17 9554225 9554340 -85718311 + (TG)n Simple_repeat Simple_repeat 1 116 0 7 657 449 388 33 16 chr17 9554474 9554718 -85717933 - B4A SINE B4 -44 248 1 7 657 34516 41 4 15 chr17 9554739 9559920 -85712731 + L1Md_A LINE L1 469 5586 -297 7 657 8393 34 0 1 chr17 9559920 9560916 -85711735 + L1Md_A LINE L1 5587 6581 -1 7 657 329 119 0 33 chr17 9561318 9561379 -85711272 + C-rich Low_complexity Low_complexity 6 64 0 7 657 191 114 0 28 chr17 9563147 9563183 -85709468 + (TGGGGG)n Simple_repeat Simple_repeat 2 36 0 7 657 196 250 180 16 chr17 9563335 9563449 -85709202 + MIRb SINE MIR 32 161 -107 7 657 2791 132 13 30 chr17 9563513 9563974 -85708677 + Lx4A LINE L1 6606 7058 0 8 657 278 252 77 10 chr17 9563976 9564080 -85708571 + L1MC LINE L1 5091 5201 -945 8 657 289 299 68 21 chr17 9564252 9564443 -85708208 + L1M5 LINE L1 5408 5607 -555 8 657 473 265 88 62 chr17 9564443 9564636 -85708015 + B3 SINE B2 2 199 -17 8 657 234 128 0 0 chr17 9566591 9566630 -85706021 + (TA)n Simple_repeat Simple_repeat 1 39 0 8 657 260 231 51 0 chr17 9566677 9566755 -85705896 - Lx4A LINE L1 -403 6655 6574 8 657 440 256 177 24 chr17 9567531 9567904 -85704747 - L1MD LINE L1 -1208 4938 4509 8 82 475 359 80 52 chr17 9568064 9568390 -85704261 - L1MDa LINE L1 -6206 427 93 8 658 838 301 20 37 chr17 9569109 9569406 -85703245 - B4A SINE B4 0 292 1 8 658 253 263 0 0 chr17 9569642 9569699 -85702952 + (TG)n Simple_repeat Simple_repeat 2 58 0 8 658 301 259 138 9 chr17 9571258 9571367 -85701284 - HAL1-3A_ME LINE L1 -452 2406 2284 9 658 348 24 0 0 chr17 9572083 9572124 -85700527 + (CAAT)n Simple_repeat Simple_repeat 2 42 0 9 658 1772 162 0 7 chr17 9573503 9573802 -85698849 + Lx LINE L1 363 659 -5998 9 658 22619 154 24 11 chr17 9573781 9576343 -85696308 + Lx LINE L1 574 3218 -2668 9 658 3338 41 5 0 chr17 9576343 9576737 -85695914 - MTA_Mm LTR MaLR 0 396 1 9 658 22619 167 34 12 chr17 9576737 9577713 -85694938 + Lx LINE L1 3219 4193 -1693 9 658 1007 39 110 0 chr17 9577713 9577840 -85694811 + B1_Mm SINE Alu 1 141 -6 9 658 22619 161 24 10 chr17 9577840 9580285 -85692366 + Lx LINE L1 4194 6654 0 9 658 336 274 68 30 chr17 9580308 9580440 -85692211 + RMER15 LTR ERVL 3 139 -436 9 658 237 270 165 22 chr17 9580465 9580556 -85692095 + RMER15 LTR ERVL 275 378 -197 9 658 315 286 116 12 chr17 9580559 9580810 -85691841 - L1M2 LINE L1 -2460 3683 3407 9 658 297 0 0 0 chr17 9580812 9580845 -85691806 + (CA)n Simple_repeat Simple_repeat 2 34 0 9 658 848 240 62 5 chr17 9580895 9581104 -85691547 - MTEa LTR MaLR 0 379 159 9 658 47 19 0 0 chr17 9581258 9581312 -85691339 + AT_rich Low_complexity Low_complexity 1 54 0 9 658 793 276 76 34 chr17 9582433 9582669 -85689982 + B4A SINE B4 2 247 -45 1 658 612 40 0 0 chr17 9582840 9582915 -85689736 + (TC)n Simple_repeat Simple_repeat 1 75 0 1 658 1130 65 0 0 chr17 9584268 9584407 -85688244 - B1_Mm SINE Alu -8 139 1 1 658 293 258 20 10 chr17 9584531 9584635 -85688016 - L1MA6 LINE L1 -364 5936 5832 1 658 310 330 91 22 chr17 9584813 9585015 -85687636 - L1M2 LINE L1 -324 5556 5343 1 658 276 30 0 0 chr17 9585015 9585048 -85687603 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 658 310 277 115 24 chr17 9585048 9585267 -85687384 - L1M2 LINE L1 -788 5355 5131 1 658 294 254 23 69 chr17 9585397 9585502 -85687149 - PB1D10 SINE Alu -7 113 14 1 658 514 263 136 22 chr17 9585523 9585789 -85686862 - L1M2 LINE L1 -3033 3110 2793 1 658 456 268 11 42 chr17 9586153 9586344 -85686307 - L1M2 LINE L1 -3366 2777 2593 1 658 1047 89 14 0 chr17 9586403 9586549 -85686102 - B1_Mus1 SINE Alu 0 148 1 1 658 287 335 48 9 chr17 9586549 9586850 -85685801 - L1M2 LINE L1 -3411 2436 2130 1 658 247 78 19 19 chr17 9586895 9586947 -85685704 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 1 658 185 65 0 31 chr17 9587475 9587507 -85685144 + (TAAAAA)n Simple_repeat Simple_repeat 4 34 0 1 658 812 320 50 32 chr17 9588184 9588646 -85684005 - Lx8 LINE L1 -34 7439 6970 1 658 212 369 85 59 chr17 9589677 9589787 -85682864 + B1F SINE Alu 28 141 -8 1 658 897 100 0 0 chr17 9589787 9589917 -85682734 + (GGAGA)n Simple_repeat Simple_repeat 2 131 0 1 658 421 259 86 8 chr17 9592040 9592157 -85680494 - B3 SINE B2 -4 212 87 1 658 809 250 34 23 chr17 9592206 9592220 -85680431 - B3 SINE B2 -37 179 167 1 658 423 56 0 0 chr17 9592220 9592274 -85680377 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 658 809 250 34 23 chr17 9592274 9592435 -85680216 - B3 SINE B2 -50 166 2 1 658 459 0 0 0 chr17 9593434 9593485 -85679166 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 658 2008 140 16 3 chr17 9594079 9594401 -85678250 + ORR1A3 LTR MaLR 1 326 0 1 658 302 247 129 40 chr17 9594775 9594876 -85677775 - MER67D LTR ERV1 -168 346 237 1 658 1207 186 22 9 chr17 9594924 9595146 -85677505 - RMER6D LTR ERVK 0 720 496 1 658 1812 122 96 6 chr17 9595159 9595481 -85677170 - RMER6D LTR ERVK -369 351 1 1 658 230 221 52 0 chr17 9595544 9595621 -85677030 - Lx6 LINE L1 -2 7458 7378 1 658 337 288 106 14 chr17 9595672 9595813 -85676838 - MER67D LTR ERV1 -355 159 6 1 658 1424 33 0 16 chr17 9596354 9596537 -85676114 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 1 658 269 289 130 82 chr17 9596728 9596935 -85675716 + MLT1A LTR MaLR 87 303 -71 1 658 499 309 75 46 chr17 9598160 9598442 -85674209 + B4 SINE B4 3 292 0 1 658 308 24 24 0 chr17 9598602 9598643 -85674008 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 658 548 222 65 117 chr17 9598980 9599194 -85673457 - B3 SINE B2 -12 204 2 1 658 281 296 0 47 chr17 9601141 9601226 -85671425 + ID4 SINE ID 3 83 0 1 658 303 218 0 3 chr17 9601527 9601591 -85671060 - MTE2b LTR MaLR -299 80 18 1 658 414 57 0 0 chr17 9602038 9602091 -85670560 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 1 658 448 150 53 23 chr17 9602113 9602284 -85670367 + (TGGA)n Simple_repeat Simple_repeat 3 178 0 1 658 198 91 0 0 chr17 9603236 9603269 -85669382 + (G)n Simple_repeat Simple_repeat 1 33 0 1 658 192 125 0 0 chr17 9604180 9604212 -85668439 + (CACCAT)n Simple_repeat Simple_repeat 4 35 0 1 658 1105 243 164 12 chr17 9604251 9604695 -85667956 - RMER20B LTR ERVK 0 516 1 1 658 741 110 0 0 chr17 9606159 9606277 -85666374 + (TTCC)n Simple_repeat Simple_repeat 1 118 0 1 658 22 0 0 0 chr17 9606396 9606418 -85666233 + AT_rich Low_complexity Low_complexity 1 22 0 1 658 267 267 41 56 chr17 9606821 9607030 -85665621 + B4A SINE B4 1 266 -26 1 658 267 103 0 0 chr17 9607081 9607120 -85665531 + (CACG)n Simple_repeat Simple_repeat 1 39 0 1 658 633 247 19 106 chr17 9607143 9607351 -85665300 - ORR1E LTR MaLR -167 192 3 1 658 268 224 64 29 chr17 9607354 9607494 -85665157 - L1M2 LINE L1 -1381 4762 4615 1 658 316 301 60 29 chr17 9607656 9607991 -85664660 - L1M2 LINE L1 -2466 3381 3037 1 658 813 243 27 22 chr17 9608001 9608186 -85664465 - B3 SINE B2 -3 213 28 1 658 957 167 106 26 chr17 9609046 9609273 -85663378 + ORR1B1 LTR MaLR 150 394 0 1 658 2584 58 3 58 chr17 9609909 9610255 -85662396 + ORR1A2 LTR MaLR 1 327 0 1 658 451 258 0 0 chr17 9610331 9610428 -85662223 + Lx8 LINE L1 7166 7262 -211 1 658 29 84 0 0 chr17 9610695 9610766 -85661885 + AT_rich Low_complexity Low_complexity 1 71 0 1 658 636 228 183 54 chr17 9610826 9611067 -85661584 + RLTR10A LTR ERVK 140 411 0 1 658 666 0 0 0 chr17 9612190 9612264 -85660387 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 658 934 284 34 4 chr17 9612608 9612873 -85659778 + ORR1E LTR MaLR 4 276 -83 1 658 401 256 151 61 chr17 9612897 9613109 -85659542 - MER2 DNA MER2_type -83 262 32 1 658 550 319 102 19 chr17 9613496 9613761 -85658890 + MTEa LTR MaLR 56 342 -37 1 658 249 108 0 0 chr17 9614574 9614611 -85658040 + (T)n Simple_repeat Simple_repeat 1 37 0 1 658 4134 160 145 47 chr17 9615916 9616852 -85655799 + RLTR25B LTR ERVK 1 1028 0 1 658 255 344 86 21 chr17 9617097 9617284 -85655367 + Tigger5 DNA MER2_type 37 235 -2171 1 658 526 234 31 0 chr17 9618402 9618530 -85654121 + B1F2 SINE Alu 17 148 -1 1 658 226 318 37 67 chr17 9618411 9618546 -85654105 + B4 SINE B4 111 241 -51 1 658 23 0 0 0 chr17 9618800 9618823 -85653828 + AT_rich Low_complexity Low_complexity 1 23 0 1 658 2997 43 52 0 chr17 9619164 9619533 -85653118 - RLTR10 LTR ERVK -2 388 1 1 658 210 340 41 0 chr17 9620076 9620173 -85652478 - MIR SINE MIR -29 233 133 1 658 380 230 43 34 chr17 9620394 9620511 -85652140 - PB1D7 SINE Alu 0 120 3 1 658 2486 97 82 92 chr17 9623253 9623740 -85648911 - RLTR45 LTR ERVK 0 482 1 1 658 920 259 0 14 chr17 9623940 9624159 -85648492 - B3 SINE B2 0 216 1 1 658 225 304 36 0 chr17 9624432 9624488 -85648163 - B4 SINE B4 -173 119 62 1 658 507 187 178 0 chr17 9624636 9624743 -85647908 + B1_Mur3 SINE Alu 11 136 -13 1 658 423 0 0 0 chr17 9624745 9624792 -85647859 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 1 658 419 113 14 0 chr17 9624794 9624865 -85647786 + (GA)n Simple_repeat Simple_repeat 1 72 0 1 658 226 367 10 0 chr17 9626297 9626395 -85646256 + MER2B DNA MER2_type 229 327 -9 1 658 885 226 69 30 chr17 9626404 9626709 -85645942 - L1MA7 LINE L1 -2 6289 5973 1 658 3243 48 5 8 chr17 9626924 9627321 -85645330 - MTA_Mm LTR MaLR 0 396 1 1 658 333 68 0 0 chr17 9627640 9627684 -85644967 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 658 255 331 191 0 chr17 9627684 9627841 -85644810 + MLT1D LTR MaLR 268 454 -51 1 658 261 0 0 0 chr17 9629437 9629466 -85643185 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 1 658 186 263 39 26 chr17 9629940 9630018 -85642633 - MIRb SINE MIR -74 194 116 1 658 240 273 0 13 chr17 9630748 9630826 -85641825 + CT-rich Low_complexity Low_complexity 2 78 0 1 658 3237 133 68 26 chr17 9631372 9631958 -85640693 - RMER13B LTR ERVK -297 611 1 1 658 23 33 0 0 chr17 9632043 9632073 -85640578 + AT_rich Low_complexity Low_complexity 1 30 0 1 658 21 36 0 0 chr17 9632220 9632248 -85640403 + AT_rich Low_complexity Low_complexity 1 28 0 1 658 213 121 0 0 chr17 9632783 9632816 -85639835 + (GA)n Simple_repeat Simple_repeat 2 34 0 1 658 279 0 0 0 chr17 9633472 9633503 -85639148 + (A)n Simple_repeat Simple_repeat 1 31 0 1 658 273 119 0 0 chr17 9634085 9634127 -85638524 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 658 201 74 0 0 chr17 9634964 9634991 -85637660 + (CTCG)n Simple_repeat Simple_repeat 3 29 0 1 658 419 223 0 23 chr17 9635112 9635245 -85637406 + CT-rich Low_complexity Low_complexity 2 131 0 1 658 432 0 0 0 chr17 9635245 9635293 -85637358 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 658 198 0 0 0 chr17 9635343 9635365 -85637286 + (CAGCT)n Simple_repeat Simple_repeat 2 23 0 1 658 291 352 125 47 chr17 9635377 9635563 -85637088 - MER73 LTR ERVL -186 458 250 1 658 427 312 40 60 chr17 9635563 9635764 -85636887 + B3A SINE B2 1 197 -1 1 658 291 352 125 47 chr17 9635764 9635985 -85636666 - MER73 LTR ERVL -395 249 19 1 658 1302 169 48 101 chr17 9636439 9636674 -85635977 - MTC LTR MaLR 0 421 206 1 658 450 0 0 0 chr17 9636674 9636724 -85635927 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 1 658 3048 72 14 14 chr17 9636724 9637147 -85635504 - L1_Mus3 LINE L1 -15 6623 6201 1 658 1302 189 76 108 chr17 9637147 9637303 -85635348 - MTC LTR MaLR -216 205 3 1 658 640 276 5 42 chr17 9637579 9637768 -85634883 + B3 SINE B2 1 182 -34 1 658 238 317 59 0 chr17 9639859 9639876 -85632775 + PB1D10 SINE Alu 1 40 -77 1 658 245 271 0 0 chr17 9639876 9639935 -85632716 + ID_B1 SINE B4 102 160 -64 1 658 238 317 59 0 chr17 9639935 9639960 -85632691 + PB1D10 SINE Alu 41 107 -10 1 658 589 244 287 19 chr17 9640280 9640611 -85632040 + MTD LTR MaLR 1 419 0 1 658 182 348 14 14 chr17 9641771 9641841 -85630810 - L2b LINE L2 -8 3367 3298 1 658 252 0 0 0 chr17 9643205 9643233 -85629418 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1 658 280 300 109 10 chr17 9643803 9643995 -85628656 + L1MB8 LINE L1 5915 6125 -53 1 658 306 125 0 0 chr17 9644147 9644195 -85628456 + (GGA)n Simple_repeat Simple_repeat 2 49 0 1 658 3862 172 111 20 chr17 9645328 9645617 -85627034 + Lx6 LINE L1 4994 5282 -598 1 658 405 0 0 0 chr17 9645617 9645662 -85626989 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 658 321 26 0 0 chr17 9645663 9645701 -85626950 + (GA)n Simple_repeat Simple_repeat 2 39 0 1 658 3862 194 86 47 chr17 9645701 9646610 -85626041 + Lx6 LINE L1 5283 6248 -1212 1 658 1188 207 18 0 chr17 9646623 9646840 -85625811 + Lx6 LINE L1 7017 7237 -223 1 658 258 32 0 0 chr17 9648289 9648320 -85624331 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 658 578 197 7 0 chr17 9648320 9648457 -85624194 + (TA)n Simple_repeat Simple_repeat 1 138 0 1 658 294 73 0 0 chr17 9649624 9649665 -85622986 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 658 1587 289 94 36 chr17 9650263 9650965 -85621686 - Lx8 LINE L1 -2 7471 6729 2 658 472 303 34 34 chr17 9652458 9652663 -85619988 - B3 SINE B2 -7 209 5 2 658 262 288 62 12 chr17 9652755 9652836 -85619815 + RSINE1 SINE B4 64 148 -17 2 658 21 0 0 0 chr17 9652957 9652978 -85619673 + AT_rich Low_complexity Low_complexity 1 21 0 2 658 217 212 41 133 chr17 9653985 9654083 -85618568 + B1_Mus1 SINE Alu 2 90 -58 2 658 309 224 193 34 chr17 9654005 9654093 -85618558 + ID_B1 SINE B4 106 207 -17 2 658 1003 89 6 22 chr17 9655127 9655310 -85617341 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 658 497 310 110 37 chr17 9655511 9655729 -85616922 + B4A SINE B4 47 280 -12 2 658 259 231 132 0 chr17 9656059 9656150 -85616501 - L1M5 LINE L1 -381 5781 5679 2 658 1646 201 63 18 chr17 9656776 9657156 -85615495 + MTC LTR MaLR 25 421 0 2 658 4314 238 33 18 chr17 9657676 9658615 -85614036 + L1_Mur3 LINE L1 520 2087 -3793 2 658 1726 208 45 6 chr17 9658615 9658968 -85613683 + ORR1B2 LTR MaLR 1 367 0 2 658 4314 182 36 14 chr17 9658968 9659322 -85613329 + L1_Mur3 LINE L1 2088 2449 -3431 2 658 312 348 137 63 chr17 9659470 9659740 -85612911 + B4A SINE B4 1 290 -2 2 658 206 220 17 0 chr17 9659904 9659963 -85612688 + GA-rich Low_complexity Low_complexity 3 62 0 2 658 303 49 0 0 chr17 9661069 9661110 -85611541 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 658 490 277 0 37 chr17 9661282 9661417 -85611234 + B3 SINE B2 2 131 -85 2 658 496 246 355 30 chr17 9662450 9662666 -85609985 + B4 SINE B4 2 288 -4 2 658 448 337 84 85 chr17 9663140 9663633 -85609018 + MLT2B1 LTR ERVL 2 515 0 2 658 567 309 75 50 chr17 9663634 9664036 -85608615 + ERVL-B4-int LTR ERVL 2 413 -5301 2 658 2023 157 17 14 chr17 9665087 9665443 -85607208 + RLTR15 LTR ERVK 3 359 0 2 658 656 83 10 0 chr17 9667908 9668004 -85604647 + (GA)n Simple_repeat Simple_repeat 2 98 0 2 658 596 140 0 0 chr17 9668195 9668288 -85604363 - Lx2B LINE L1 -607 5279 5187 2 658 7606 156 39 11 chr17 9668282 9669947 -85602704 + Lx2B LINE L1 5275 6998 -2 2 658 907 231 14 42 chr17 9670018 9670235 -85602416 - B3 SINE B2 -4 212 2 2 658 450 157 0 0 chr17 9671180 9671282 -85601369 + (CATA)n Simple_repeat Simple_repeat 2 103 0 2 658 265 328 141 26 chr17 9671430 9671621 -85601030 + MLT1D LTR MaLR 3 215 -290 2 658 479 347 78 66 chr17 9672331 9672675 -85599976 + L1M5 LINE L1 2682 3041 -3105 2 658 907 306 0 0 chr17 9672675 9672884 -85599767 + B3 SINE B2 1 209 -7 2 658 479 347 78 66 chr17 9672884 9672898 -85599753 + L1M5 LINE L1 3042 3058 -3088 2 658 492 99 0 0 chr17 9672898 9672969 -85599682 + (CATA)n Simple_repeat Simple_repeat 2 72 0 2 658 479 347 78 66 chr17 9672969 9673488 -85599163 + L1M5 LINE L1 3059 3571 -2575 2 658 363 239 25 0 chr17 9673627 9673720 -85598931 + B1F2 SINE Alu 1 100 -20 2 658 29 0 0 0 chr17 9674073 9674102 -85598549 + AT_rich Low_complexity Low_complexity 1 29 0 2 658 270 0 0 0 chr17 9674105 9674135 -85598516 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 658 4588 156 115 50 chr17 9674135 9675143 -85597508 + RMER12 LTR ERVK 9 1082 -240 2 658 232 186 14 28 chr17 9675238 9675246 -85597405 + (CATA)n Simple_repeat Simple_repeat 1 8 0 2 658 411 21 0 0 chr17 9675246 9675294 -85597357 + (TC)n Simple_repeat Simple_repeat 2 49 0 2 658 232 186 14 28 chr17 9675294 9675357 -85597294 + (CATA)n Simple_repeat Simple_repeat 1 62 0 2 658 792 191 0 0 chr17 9675359 9675537 -85597114 + (CA)n Simple_repeat Simple_repeat 2 179 0 2 658 216 0 0 0 chr17 9675965 9675989 -85596662 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 658 192 40 0 0 chr17 9675989 9676013 -85596638 + (GA)n Simple_repeat Simple_repeat 1 25 0 2 658 478 314 96 29 chr17 9676074 9676125 -85596526 - B4A SINE B4 -2 290 240 2 658 365 0 22 0 chr17 9676125 9676170 -85596481 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 658 478 314 96 29 chr17 9676170 9676390 -85596261 - B4A SINE B4 -53 239 1 2 658 227 131 31 62 chr17 9676858 9676923 -85595728 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 2 658 620 247 88 21 chr17 9677451 9677645 -85595006 - MTD LTR MaLR -195 224 18 2 658 344 257 73 0 chr17 9678284 9678393 -85594258 + PB1D7 SINE Alu 3 119 -1 2 658 1184 95 12 12 chr17 9678858 9679029 -85593622 + L1Md_F2 LINE L1 6412 6582 0 2 658 602 270 14 7 chr17 9679143 9679281 -85593370 + B4 SINE B4 95 233 -59 2 658 361 206 20 0 chr17 9679794 9679896 -85592755 + GA-rich Low_complexity Low_complexity 2 105 0 2 658 39169 10 0 7 chr17 9682922 9688255 -85584396 + L1Md_A LINE L1 296 5586 -297 2 658 9354 13 3 0 chr17 9688255 9689247 -85583404 + L1Md_A LINE L1 5587 6581 -1 2 658 459 0 0 0 chr17 9690393 9690444 -85582207 + (TA)n Simple_repeat Simple_repeat 2 52 0 2 658 653 292 54 75 chr17 9691108 9691386 -85581265 + B4A SINE B4 2 273 -19 2 658 21 36 0 0 chr17 9691891 9691919 -85580732 + AT_rich Low_complexity Low_complexity 1 28 0 2 658 237 146 0 0 chr17 9693422 9693470 -85579181 + (TC)n Simple_repeat Simple_repeat 2 49 0 2 658 247 221 11 11 chr17 9693506 9693593 -85579058 + (TG)n Simple_repeat Simple_repeat 2 88 0 2 658 223 373 46 56 chr17 9693594 9693890 -85578761 - RSINE1 SINE B4 0 292 2 2 658 15971 147 14 29 chr17 9694373 9698014 -85574637 - Lx LINE L1 -3 6651 3072 2 658 366 320 60 0 chr17 9698124 9698358 -85574293 - L1M4 LINE L1 -1603 4543 4296 2 658 732 320 53 35 chr17 9698703 9699160 -85573491 - L1MA4A LINE L1 -1636 6008 5575 2 659 683 142 0 8 chr17 9700404 9700525 -85572126 + (GGA)n Simple_repeat Simple_repeat 2 121 0 2 659 236 337 65 0 chr17 9704277 9704369 -85568282 + MER58B DNA MER1_type 243 340 -1 2 659 499 244 17 25 chr17 9704466 9704584 -85568067 + PB1D10 SINE Alu 1 117 0 2 659 379 304 93 27 chr17 9707148 9707405 -85565246 + B4A SINE B4 2 275 -17 2 659 438 20 0 0 chr17 9708849 9708900 -85563751 + (CCA)n Simple_repeat Simple_repeat 3 53 0 2 659 238 331 35 112 chr17 9709113 9709310 -85563341 - B3A SINE B2 -16 182 1 2 659 34127 73 22 6 chr17 9710215 9715287 -85557364 + L1Md_F2 LINE L1 419 5586 -297 2 659 8278 50 18 2 chr17 9715287 9716253 -85556398 + L1Md_F2 LINE L1 5587 6567 -15 2 659 618 185 86 44 chr17 9716255 9716426 -85556225 - Lx7 LINE L1 -372 5807 5634 2 659 1138 95 6 6 chr17 9716510 9716690 -85555961 + (GGA)n Simple_repeat Simple_repeat 1 180 0 2 659 3917 99 0 4 chr17 9717416 9717932 -85554719 - Lx LINE L1 0 6654 6141 2 659 4151 85 0 26 chr17 9717930 9718498 -85554153 - L1Md_F2 LINE L1 0 6582 6030 2 659 817 141 11 10 chr17 9718498 9718644 -85554007 - Lx2 LINE L1 -688 6370 6229 2 659 813 319 10 0 chr17 9718648 9718852 -85553799 + ID_B1 SINE B4 2 207 -17 2 659 241 264 118 47 chr17 9718934 9719061 -85553590 - L1_Rod LINE L1 -87 5760 5625 2 659 868 312 99 49 chr17 9719098 9719695 -85552956 + L1_Mur3 LINE L1 4809 5435 -445 2 659 5006 233 69 22 chr17 9719694 9720981 -85551670 + Lx4B LINE L1 5730 7056 -2 2 659 376 240 57 8 chr17 9720983 9721105 -85551546 + L1_Rod LINE L1 5403 5530 -317 2 659 1244 99 22 0 chr17 9722552 9722734 -85549917 - L1_Mus1 LINE L1 -1 6566 6381 2 659 499 262 262 51 chr17 9723243 9723556 -85549095 + MTEa LTR MaLR 1 379 0 2 659 626 275 0 0 chr17 9723725 9723845 -85548806 - RSINE1 SINE B4 -34 131 12 2 659 233 253 40 0 chr17 9723975 9724050 -85548601 + L1MCc LINE L1 90 167 -6256 2 659 257 282 14 14 chr17 9724799 9724871 -85547780 + GA-rich Low_complexity Low_complexity 2 73 0 2 659 560 219 53 11 chr17 9725472 9725611 -85547040 + MTD LTR MaLR 199 405 -14 2 659 2278 312 31 20 chr17 9726523 9727469 -85545182 + Lx8 LINE L1 5996 6954 -519 2 659 245 358 12 12 chr17 9727613 9727695 -85544956 + ID4_ SINE ID 2 83 0 2 659 3110 85 36 7 chr17 9728257 9728705 -85543946 + Lx3_Mus LINE L1 6547 7007 -2 2 659 475 293 71 38 chr17 9729033 9729271 -85543380 - Charlie19a DNA Charlie -140 246 1 2 659 1046 176 0 39 chr17 9729436 9729666 -85542985 + L1_Mur3 LINE L1 4951 5171 -709 2 659 231 300 22 0 chr17 9732713 9732803 -85539848 - Lx5 LINE L1 -1167 5883 5792 2 659 760 246 76 11 chr17 9733411 9733596 -85539055 + B3 SINE B2 2 198 -18 2 659 438 69 0 0 chr17 9733605 9733663 -85538988 + (GGAAA)n Simple_repeat Simple_repeat 3 60 0 2 659 24 0 0 0 chr17 9733681 9733705 -85538946 + AT_rich Low_complexity Low_complexity 1 24 0 2 659 648 269 79 32 chr17 9733802 9734092 -85538559 - Lx8 LINE L1 -131 7342 7028 2 659 2269 119 0 0 chr17 9735188 9735508 -85537143 + ORR1A2 LTR MaLR 8 327 0 2 659 286 284 68 10 chr17 9735622 9735726 -85536925 + MER34A1 LTR ERV1 455 563 -24 2 659 532 311 37 43 chr17 9735817 9736005 -85536646 - B4A SINE B4 0 292 106 2 659 453 19 0 0 chr17 9737000 9737054 -85535597 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 2 659 1160 336 68 21 chr17 9737610 9738131 -85534520 + Charlie1a DNA MER1_type 1 552 -903 2 659 224 59 29 0 chr17 9738131 9738165 -85534486 + (CAA)n Simple_repeat Simple_repeat 2 36 0 2 659 1160 336 68 21 chr17 9738165 9738318 -85534333 + Charlie1a DNA MER1_type 553 707 -748 2 659 1963 49 15 8 chr17 9738503 9738744 -85533907 + L1Md_F3 LINE L1 6316 6559 -25 2 659 462 36 0 0 chr17 9738744 9738800 -85533851 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 659 1963 49 15 8 chr17 9738800 9738824 -85533827 + L1Md_F3 LINE L1 6560 6583 -1 2 659 834 201 92 5 chr17 9738907 9739092 -85533559 + B3 SINE B2 1 201 -15 2 659 288 0 0 0 chr17 9739092 9739124 -85533527 + (ATG)n Simple_repeat Simple_repeat 2 33 0 2 659 27 0 0 0 chr17 9739982 9740009 -85532642 + AT_rich Low_complexity Low_complexity 1 27 0 3 659 5535 72 6 14 chr17 9740162 9740893 -85531758 - L1_Mus1 LINE L1 0 6567 5843 3 659 1025 17 0 0 chr17 9740893 9741012 -85531639 + MTA_Mm LTR MaLR 2 120 -276 3 659 8176 45 13 3 chr17 9741000 9742052 -85530599 - MTA_Mm-int LTR MaLR -35 1063 1 3 659 2056 43 8 0 chr17 9742052 9742306 -85530345 - MTA_Mm LTR MaLR 0 396 141 3 659 380 0 0 0 chr17 9742307 9742353 -85530298 + MTA_Mm-int LTR MaLR 1053 1098 0 3 659 1676 43 17 2 chr17 9742353 9742580 -85530071 + MTA_Mm LTR MaLR 1 248 -171 3 659 26226 106 3 6 chr17 9742580 9746837 -85525814 - L1VL1 LINE L1 -557 5326 1080 3 659 243 0 0 0 chr17 9746931 9746958 -85525693 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 659 980 258 143 8 chr17 9746963 9747285 -85525366 + ORR1D2 LTR MaLR 1 370 0 3 659 200 111 28 0 chr17 9747639 9747675 -85524976 + (GGA)n Simple_repeat Simple_repeat 3 39 0 3 659 459 73 0 0 chr17 9748097 9748165 -85524486 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 659 326 295 55 61 chr17 9748170 9748362 -85524289 - B4A SINE B4 -11 281 86 3 659 268 250 123 40 chr17 9748587 9748764 -85523887 + MER57C2 LTR ERV1 78 279 -132 3 659 825 320 69 19 chr17 9749362 9749957 -85522694 - L1M5 LINE L1 -2521 3625 3001 3 659 437 330 133 11 chr17 9749972 9750325 -85522326 - L1MEc LINE L1 -3195 3124 2729 3 659 352 296 130 0 chr17 9751001 9751271 -85521380 - L1MEc LINE L1 -4444 1956 1652 3 659 263 214 35 35 chr17 9751295 9751411 -85521240 - L1MEc LINE L1 -4822 1578 1463 3 659 489 172 32 16 chr17 9751435 9751753 -85520898 + (TG)n Simple_repeat Simple_repeat 1 323 0 3 659 268 274 51 32 chr17 9751823 9751981 -85520670 - L1MEc LINE L1 -4954 1446 1286 3 659 331 285 66 50 chr17 9751993 9752174 -85520477 - L1MEc LINE L1 -5264 1136 953 3 659 382 276 112 56 chr17 9752170 9752366 -85520285 - L1MEc LINE L1 -5697 703 497 3 659 252 0 0 0 chr17 9752452 9752480 -85520171 + (TC)n Simple_repeat Simple_repeat 1 28 0 3 659 441 0 0 0 chr17 9752657 9752706 -85519945 + (TATG)n Simple_repeat Simple_repeat 2 50 0 3 659 23758 157 28 32 chr17 9753341 9759517 -85513134 + Lx5 LINE L1 889 7050 0 3 659 252 0 0 0 chr17 9759667 9759695 -85512956 + (GA)n Simple_repeat Simple_repeat 1 28 0 3 659 561 300 82 67 chr17 9760166 9760448 -85512203 + B4A SINE B4 5 290 -2 3 659 285 29 0 0 chr17 9760488 9760522 -85512129 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 659 23 68 0 0 chr17 9761510 9761554 -85511097 + AT_rich Low_complexity Low_complexity 1 44 0 3 659 255 125 0 0 chr17 9761581 9761621 -85511030 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 659 627 294 18 0 chr17 9761647 9761817 -85510834 - B3A SINE B2 -25 173 1 3 659 463 0 48 0 chr17 9761863 9761925 -85510726 + (CAAAA)n Simple_repeat Simple_repeat 2 66 0 3 659 264 315 106 48 chr17 9762282 9762489 -85510162 - MER58B DNA MER1_type -16 325 107 3 659 203 0 37 0 chr17 9762491 9762518 -85510133 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 3 659 436 185 19 0 chr17 9762959 9763067 -85509584 + (CATA)n Simple_repeat Simple_repeat 2 111 0 3 659 332 164 15 0 chr17 9763127 9763194 -85509457 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 3 659 3803 250 54 31 chr17 9764703 9766388 -85506263 + L1_Mur3 LINE L1 900 2620 -3260 3 659 1590 146 47 0 chr17 9766394 9766668 -85505983 + RMER6B LTR ERVK 3 289 -172 3 659 351 0 0 0 chr17 9767543 9767582 -85505069 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 659 987 83 0 0 chr17 9767582 9767737 -85504914 + (GA)n Simple_repeat Simple_repeat 1 156 0 3 659 192 97 0 0 chr17 9767746 9767777 -85504874 + (CAGAGA)n Simple_repeat Simple_repeat 4 34 0 3 659 520 345 57 0 chr17 9767840 9768017 -85504634 - B4A SINE B4 -104 188 2 3 659 337 305 42 7 chr17 9768231 9768373 -85504278 - L1MD LINE L1 -2082 4064 3918 3 659 224 333 0 0 chr17 9769517 9769583 -85503068 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 659 762 253 28 0 chr17 9769584 9769762 -85502889 - B3A SINE B2 -15 183 1 3 659 29 47 0 0 chr17 9769781 9769824 -85502827 + AT_rich Low_complexity Low_complexity 1 43 0 3 659 1134 198 0 28 chr17 9770303 9770516 -85502135 + URR1B DNA MER1_type 1 207 -18 3 659 247 191 0 21 chr17 9771542 9771590 -85501061 + B3A SINE B2 1 47 -151 3 659 590 192 0 7 chr17 9771736 9771888 -85500763 + (TG)n Simple_repeat Simple_repeat 2 152 0 3 659 273 29 0 0 chr17 9772013 9772047 -85500604 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 659 2581 205 78 32 chr17 9773337 9773535 -85499116 - RLTR18 LTR ERVK 0 616 413 3 659 2945 60 5 22 chr17 9773535 9773945 -85498706 - L1_Mus3 LINE L1 -1 6637 6235 3 659 2581 205 78 32 chr17 9773945 9774335 -85498316 - RLTR18 LTR ERVK -204 412 1 3 659 194 220 17 0 chr17 9774486 9774545 -85498106 + GA-rich Low_complexity Low_complexity 2 61 0 3 659 180 143 0 0 chr17 9774663 9774705 -85497946 + (GGAGAA)n Simple_repeat Simple_repeat 6 47 0 3 659 207 0 0 0 chr17 9774948 9774971 -85497680 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 659 1137 71 0 0 chr17 9774996 9775136 -85497515 + B1_Mus2 SINE Alu 1 140 -7 3 659 456 19 0 0 chr17 9775142 9775195 -85497456 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 3 659 265 301 35 63 chr17 9775747 9775889 -85496762 + YREP_Mm Unknown Unknown 167 304 -1508 3 659 613 271 8 0 chr17 9775767 9775900 -85496751 - ID_B1 SINE B4 -10 214 81 3 659 268 222 14 0 chr17 9776271 9776343 -85496308 + MER33 DNA MER1_type 241 313 -11 3 659 205 161 0 0 chr17 9776384 9776415 -85496236 + T-rich Low_complexity Low_complexity 2 32 0 3 659 481 328 11 0 chr17 9776789 9776963 -85495688 + (CATATA)n Simple_repeat Simple_repeat 3 178 0 3 659 251 395 0 12 chr17 9776983 9777152 -85495499 + (CATATA)n Simple_repeat Simple_repeat 4 170 0 3 659 29 0 0 0 chr17 9777306 9777335 -85495316 + AT_rich Low_complexity Low_complexity 1 29 0 3 659 431 198 126 29 chr17 9777442 9777584 -85495067 + ORR1D1 LTR MaLR 1 141 -253 3 659 7373 83 44 8 chr17 9777656 9778605 -85494046 - RLTR13C1 LTR ERVK 0 983 1 3 659 1350 155 84 26 chr17 9778658 9778959 -85493692 + ORR1C2 LTR MaLR 55 377 -7 3 659 3686 18 5 0 chr17 9780438 9780832 -85491819 + MTA_Mm LTR MaLR 1 396 0 3 659 9785 34 2 1 chr17 9780832 9781929 -85490722 + MTA_Mm-int LTR MaLR 1 1098 0 3 659 3695 20 2 0 chr17 9781929 9782324 -85490327 + MTA_Mm LTR MaLR 1 396 0 3 659 415 278 32 21 chr17 9783056 9783191 -85489460 - B1F SINE Alu 0 149 13 3 659 264 343 77 96 chr17 9783361 9783622 -85489029 - MLT1H1 LTR MaLR -290 265 10 3 659 546 91 0 0 chr17 9783824 9783901 -85488750 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 659 236 284 198 18 chr17 9786780 9786891 -85485760 + MLT1A1 LTR MaLR 258 388 -20 3 659 4463 121 62 88 chr17 9787391 9788019 -85484632 - RMER17A2 LTR ERVK -11 895 313 3 659 822 73 0 0 chr17 9788019 9788129 -85484522 + (GGGGA)n Simple_repeat Simple_repeat 2 111 0 3 659 4463 121 62 88 chr17 9788129 9788419 -85484232 - RMER17A2 LTR ERVK -594 312 1 3 659 1783 306 39 63 chr17 9788986 9789865 -85482786 + Lx7 LINE L1 6589 7467 -6 3 659 593 326 57 6 chr17 9790146 9790322 -85482329 + ID_B1 SINE B4 15 199 -25 3 659 322 311 56 24 chr17 9790220 9790345 -85482306 + B1F1 SINE Alu 14 142 -7 3 659 345 163 21 11 chr17 9790352 9790445 -85482206 + (TAGA)n Simple_repeat Simple_repeat 1 94 0 3 659 341 162 15 0 chr17 9790580 9790648 -85482003 + CT-rich Low_complexity Low_complexity 2 70 0 3 659 1250 251 43 75 chr17 9791700 9792045 -85480606 + ORR1E LTR MaLR 26 359 0 3 659 1201 248 73 13 chr17 9792056 9792371 -85480280 - MTEa LTR MaLR -45 334 1 3 659 528 185 121 61 chr17 9793490 9793622 -85479029 + B1F2 SINE Alu 5 144 -5 3 659 1017 261 87 45 chr17 9794501 9794963 -85477688 - L1MA4 LINE L1 -329 5971 5491 3 659 1522 0 0 11 chr17 9794963 9795143 -85477508 + (TTC)n Simple_repeat Simple_repeat 3 180 0 3 659 978 269 61 104 chr17 9795143 9795254 -85477397 - L1MA4 LINE L1 -810 5490 5416 3 659 492 294 79 0 chr17 9795299 9795425 -85477226 + B3A SINE B2 2 137 -61 3 659 270 0 0 0 chr17 9795443 9795473 -85477178 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 659 44 46 0 0 chr17 9795473 9795538 -85477113 + AT_rich Low_complexity Low_complexity 1 65 0 3 659 273 345 139 57 chr17 9795716 9795996 -85476655 + LTR40b LTR ERVL 121 423 -39 3 659 315 0 0 0 chr17 9796076 9796111 -85476540 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 659 230 330 44 88 chr17 9796119 9796232 -85476419 + MIRc SINE MIR 21 128 -140 3 659 586 309 196 13 chr17 9797884 9798277 -85474374 + MER70A LTR ERVL 3 467 -5 3 659 226 254 0 27 chr17 9798791 9798864 -85473787 - MER45R DNA Tip100 -82 1499 1429 3 659 331 264 11 0 chr17 9798932 9799019 -85473632 - MER45R DNA Tip100 -258 1323 1236 3 659 490 339 104 60 chr17 9799189 9799744 -85472907 - Lx8 LINE L1 0 7473 6894 3 659 468 299 30 0 chr17 9799919 9800083 -85472568 - MER45R DNA Tip100 -437 1144 976 3 659 577 148 0 0 chr17 9800580 9800668 -85471983 - RLTR9B2 LTR ERVK 0 420 333 3 659 7564 37 2 2 chr17 9800668 9801629 -85471022 - L1Md_F2 LINE L1 -117 6465 5505 3 659 550 82 0 23 chr17 9801629 9801716 -85470935 + L1Md_F2 LINE L1 6479 6563 -19 3 659 209 57 0 28 chr17 9801719 9801755 -85470896 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 659 2091 148 11 34 chr17 9801896 9801908 -85470743 - RLTR9B2 LTR ERVK -67 353 343 3 659 315 19 38 19 chr17 9801908 9801961 -85470690 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 3 659 2091 148 11 34 chr17 9801961 9802304 -85470347 - RLTR9B2 LTR ERVK -78 342 6 3 659 376 107 38 62 chr17 9802315 9802395 -85470256 - ETnERV2-int LTR ERVK -2 7404 7327 3 659 3665 65 43 4 chr17 9802414 9802878 -85469773 + RLTR45 LTR ERVK 1 482 0 3 659 637 192 151 187 chr17 9803075 9803116 -85469535 - ETnERV2-int LTR ERVK -984 6422 6381 3 659 897 116 19 0 chr17 9803116 9803271 -85469380 + (TA)n Simple_repeat Simple_repeat 2 159 0 3 659 637 192 151 187 chr17 9803271 9803561 -85469090 - ETnERV2-int LTR ERVK -1026 6380 6103 3 659 6833 185 75 30 chr17 9803573 9803705 -85468946 - RMER16-int LTR ERVK -1230 4176 4053 3 659 3391 41 8 8 chr17 9803705 9804101 -85468550 - MTA_Mm LTR MaLR 0 396 1 3 659 6833 185 75 30 chr17 9804101 9805236 -85467415 - RMER16-int LTR ERVK -1354 4052 2857 3 659 180 0 0 0 chr17 9805236 9805256 -85467395 + (GA)n Simple_repeat Simple_repeat 1 20 0 3 659 6833 185 75 30 chr17 9805256 9805491 -85467160 - RMER16-int LTR ERVK -2550 2856 2606 3 659 215 268 18 18 chr17 9806983 9807040 -85465611 - B1F2 SINE Alu -71 78 22 3 659 344 347 13 40 chr17 9806992 9807142 -85465509 - B4A SINE B4 -139 153 8 3 659 660 297 18 48 chr17 9807559 9807725 -85464926 - RSINE1 SINE B4 -2 163 3 3 659 787 281 94 67 chr17 9807725 9808053 -85464598 - MTEa LTR MaLR -40 339 3 3 659 264 299 74 31 chr17 9809506 9809639 -85463012 - PB1D9 SINE Alu -9 140 1 3 659 189 282 0 0 chr17 9809976 9810015 -85462636 + L2a LINE L2 3312 3350 -76 3 659 324 0 0 0 chr17 9810790 9810826 -85461825 + (TAA)n Simple_repeat Simple_repeat 2 37 0 4 659 263 309 40 25 chr17 9811184 9811273 -85461378 + PB1D10 SINE Alu 7 99 -21 4 659 266 311 58 16 chr17 9811915 9812070 -85460581 - MIRm SINE MIR -64 204 49 4 659 194 381 51 11 chr17 9812089 9812264 -85460387 + MIRc SINE MIR 72 253 -15 4 659 318 50 0 0 chr17 9813962 9814002 -85458649 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 659 228 392 9 18 chr17 9814223 9814332 -85458319 - MLT1A0 LTR MaLR -80 387 280 4 659 376 314 9 0 chr17 9815184 9815289 -85457362 - MLT1A0 LTR MaLR -232 133 28 4 659 1525 219 20 11 chr17 9815662 9816009 -85456642 - Lx2B LINE L1 -3 6997 6648 4 659 1580 175 24 20 chr17 9816010 9816302 -85456349 + Lx2B LINE L1 6388 6680 -320 4 659 1770 209 35 30 chr17 9816625 9816995 -85455656 + ORR1D1 LTR MaLR 3 374 0 4 659 549 128 48 17 chr17 9817655 9817887 -85454764 + (TAGA)n Simple_repeat Simple_repeat 1 239 0 4 659 335 217 62 25 chr17 9817947 9818108 -85454543 + (TAGA)n Simple_repeat Simple_repeat 4 170 0 4 659 243 213 10 41 chr17 9818063 9818161 -85454490 + (TA)n Simple_repeat Simple_repeat 1 95 0 4 659 423 0 0 0 chr17 9818358 9818405 -85454246 + (TATG)n Simple_repeat Simple_repeat 4 50 0 4 659 1257 55 14 0 chr17 9818649 9818795 -85453856 - B1_Mus1 SINE Alu 0 148 1 4 659 3041 250 151 64 chr17 9819590 9820452 -85452199 + RLTR22_Mus LTR ERVK 1 899 -909 4 659 765 0 0 0 chr17 9820452 9820537 -85452114 + (GAGAA)n Simple_repeat Simple_repeat 1 85 0 4 659 3041 250 151 64 chr17 9820537 9821156 -85451495 + RLTR22_Mus LTR ERVK 900 1611 -197 4 659 1280 48 0 0 chr17 9821872 9822019 -85450632 + B1_Mus1 SINE Alu 2 148 0 4 659 446 245 202 55 chr17 9822372 9822602 -85450049 + RLTR41 LTR ERV1 254 499 -33 4 659 1828 115 33 4 chr17 9823046 9823317 -85449334 - RLTR20C LTR ERVK -255 279 1 4 659 394 275 51 65 chr17 9823317 9823531 -85449120 + RLTR12B LTR ERVK 81 291 -237 4 659 769 283 31 0 chr17 9823582 9823773 -85448878 + B3 SINE B2 2 198 -18 4 659 216 86 0 0 chr17 9823795 9823830 -85448821 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 659 1004 85 0 0 chr17 9823830 9823959 -85448692 - B1_Mm SINE Alu -10 137 9 4 659 22 35 0 0 chr17 9823967 9823996 -85448655 + AT_rich Low_complexity Low_complexity 1 29 0 4 659 1082 191 64 25 chr17 9824086 9824354 -85448297 + RLTR11A LTR ERVK 1 262 -183 4 659 1329 73 0 0 chr17 9824354 9824532 -85448119 + (GGA)n Simple_repeat Simple_repeat 3 180 0 4 659 415 285 55 76 chr17 9824532 9824552 -85448099 + RLTR11A LTR ERVK 263 283 -162 4 659 315 0 0 0 chr17 9824552 9824587 -85448064 + (GAA)n Simple_repeat Simple_repeat 2 36 0 4 659 1342 210 19 57 chr17 9824587 9824905 -85447746 + RLTR11A LTR ERVK 214 519 -9 4 659 663 273 110 48 chr17 9825320 9825655 -85446996 - ORR1E LTR MaLR -3 356 1 4 659 180 259 35 69 chr17 9826211 9826269 -85446382 + MIRb SINE MIR 179 234 -34 4 659 203 79 0 26 chr17 9826349 9826388 -85446263 + (TTTTTG)n Simple_repeat Simple_repeat 3 40 0 4 659 848 230 15 41 chr17 9826388 9826583 -85446068 + MTD LTR MaLR 12 201 -218 4 659 200 372 129 27 chr17 9827924 9828289 -85444362 - L2a LINE L2 -35 3391 2990 4 659 437 308 121 86 chr17 9828433 9828521 -85444130 - L2a LINE L2 -659 2760 2648 4 659 232 48 48 0 chr17 9828521 9828563 -85444088 + (TTG)n Simple_repeat Simple_repeat 2 45 0 4 659 437 308 121 86 chr17 9828563 9828953 -85443698 - L2a LINE L2 -772 2647 2265 4 659 227 196 0 0 chr17 9829134 9829185 -85443466 + A-rich Low_complexity Low_complexity 1 51 0 4 659 21 0 0 0 chr17 9829732 9829753 -85442898 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 1307 295 35 8 chr17 9829808 9830174 -85442477 - MTE2b LTR MaLR -2 377 2 4 660 557 309 17 58 chr17 9830646 9830818 -85441833 + RSINE1 SINE B4 1 165 0 4 660 330 26 0 0 chr17 9830838 9830877 -85441774 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 660 225 0 0 0 chr17 9831806 9831831 -85440820 + (TC)n Simple_repeat Simple_repeat 2 26 0 4 660 225 0 0 0 chr17 9831831 9831855 -85440796 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 660 1106 228 151 26 chr17 9831904 9832215 -85440436 - MTD LTR MaLR -64 355 6 4 660 1437 242 13 74 chr17 9832804 9833196 -85439455 - ORR1D2 LTR MaLR 0 370 3 4 660 293 252 224 32 chr17 9833744 9833900 -85438751 - MLT1A0 LTR MaLR 0 365 180 4 660 1951 175 11 3 chr17 9834028 9834384 -85438267 + RLTR15 LTR ERVK 1 359 0 4 660 229 308 87 43 chr17 9839793 9840000 -85432651 + MER74A LTR ERVL 179 394 -164 4 660 522 114 0 0 chr17 9840905 9840984 -85431667 + (TG)n Simple_repeat Simple_repeat 2 80 0 4 660 245 269 70 81 chr17 9841362 9841548 -85431103 + MER63D DNA AcHobo 45 228 -833 4 660 911 231 23 37 chr17 9841667 9841692 -85430959 - B3 SINE B2 -2 214 197 4 660 3599 18 0 0 chr17 9841692 9842088 -85430563 - MTA_Mm LTR MaLR 0 396 1 4 660 911 231 23 37 chr17 9842088 9842278 -85430373 - B3 SINE B2 -20 196 2 4 660 376 328 11 0 chr17 9843795 9843972 -85428679 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 660 282 336 8 0 chr17 9843998 9844129 -85428522 + (CA)n Simple_repeat Simple_repeat 1 132 0 4 660 272 348 7 0 chr17 9844150 9844288 -85428363 + (CA)n Simple_repeat Simple_repeat 2 140 0 4 660 3184 213 80 20 chr17 9844348 9845051 -85427600 + Lx7 LINE L1 6292 7036 -660 4 660 255 303 0 22 chr17 9845883 9846025 -85426626 + (TATG)n Simple_repeat Simple_repeat 1 138 0 4 660 386 149 11 0 chr17 9846033 9846120 -85426531 + (TG)n Simple_repeat Simple_repeat 2 89 0 4 660 500 0 17 0 chr17 9848192 9848252 -85424399 + (TAGA)n Simple_repeat Simple_repeat 3 63 0 4 660 619 273 7 0 chr17 9848267 9848417 -85424234 - Lx8 LINE L1 -535 6938 6788 4 660 295 327 64 25 chr17 9848430 9848634 -85424017 + Lx8 LINE L1 7254 7465 -8 4 660 414 274 53 53 chr17 9848718 9848849 -85423802 + ID_B1 SINE B4 65 195 -29 4 660 3452 40 2 0 chr17 9849365 9849760 -85422891 + MTA_Mm LTR MaLR 1 396 0 4 660 211 315 42 112 chr17 9850346 9850489 -85422162 + B3A SINE B2 65 197 -1 4 660 56 0 0 0 chr17 9850489 9850545 -85422106 + AT_rich Low_complexity Low_complexity 1 56 0 4 660 254 312 0 0 chr17 9851215 9851279 -85421372 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 660 247 171 48 0 chr17 9851947 9852052 -85420599 + GA-rich Low_complexity Low_complexity 1 110 0 4 660 377 316 88 61 chr17 9853439 9853846 -85418805 - MLT1A-int LTR MaLR -6 1729 949 4 660 567 294 256 57 chr17 9854051 9854569 -85418082 - MLT1A-int LTR MaLR -487 884 264 4 660 312 300 132 7 chr17 9854698 9854849 -85417802 - MLT1A LTR MaLR -19 355 186 4 660 294 227 44 22 chr17 9855667 9855757 -85416894 + L1MC4 LINE L1 7552 7643 -399 4 660 332 303 140 29 chr17 9855757 9856036 -85416615 + L1M5 LINE L1 2917 3226 -2920 4 660 681 180 0 0 chr17 9856340 9856507 -85416144 + (TG)n Simple_repeat Simple_repeat 1 167 0 4 660 261 197 0 0 chr17 9856545 9856621 -85416030 + (TG)n Simple_repeat Simple_repeat 1 76 0 4 660 237 310 56 0 chr17 9857049 9857120 -85415531 - Lx8 LINE L1 -573 6900 6826 4 660 23 33 0 0 chr17 9859350 9859380 -85413271 + AT_rich Low_complexity Low_complexity 1 30 0 4 660 207 88 0 0 chr17 9860953 9860987 -85411664 + (CAG)n Simple_repeat Simple_repeat 3 36 0 4 660 22 0 0 0 chr17 9862775 9862797 -85409854 + AT_rich Low_complexity Low_complexity 1 22 0 4 660 423 0 0 0 chr17 9862916 9862963 -85409688 + (TAAAA)n Simple_repeat Simple_repeat 2 48 0 4 660 363 96 0 0 chr17 9863030 9863082 -85409569 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 660 561 68 0 0 chr17 9863099 9863173 -85409478 + (GA)n Simple_repeat Simple_repeat 1 74 0 4 660 244 176 203 14 chr17 9863311 9863380 -85409271 - MLT1A0 LTR MaLR -52 313 232 4 660 336 244 0 68 chr17 9864325 9864413 -85408238 - ID4_ SINE ID 0 83 2 4 660 216 67 0 0 chr17 9864807 9864837 -85407814 + (CAA)n Simple_repeat Simple_repeat 1 30 0 4 660 243 0 0 0 chr17 9865152 9865179 -85407472 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 660 768 318 32 58 chr17 9866006 9866390 -85406261 + MTE2a LTR MaLR 1 383 -36 4 660 450 0 0 0 chr17 9866392 9866442 -85406209 + (TTA)n Simple_repeat Simple_repeat 2 51 0 4 660 1294 324 74 36 chr17 9866857 9867806 -85404845 + Lx7 LINE L1 6462 7470 -3 4 660 704 129 0 8 chr17 9869572 9869697 -85402954 + (TC)n Simple_repeat Simple_repeat 1 124 0 4 660 812 261 24 14 chr17 9870291 9870501 -85402150 + B3 SINE B2 5 216 0 4 660 243 327 155 48 chr17 9870636 9871095 -85401556 - MLT1H-int LTR MaLR -900 509 2 4 660 416 322 98 61 chr17 9871725 9871989 -85400662 + MLT1C LTR MaLR 180 453 -14 4 660 3862 78 26 8 chr17 9872155 9872683 -85399968 - L1_Mus4 LINE L1 0 6636 6099 4 660 297 0 0 0 chr17 9872809 9872842 -85399809 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 660 684 162 0 48 chr17 9872893 9873081 -85399570 + (TG)n Simple_repeat Simple_repeat 1 179 0 4 660 347 160 0 13 chr17 9873097 9873173 -85399478 + (TG)n Simple_repeat Simple_repeat 1 75 0 4 660 762 117 0 77 chr17 9873189 9873383 -85399268 + (TG)n Simple_repeat Simple_repeat 1 179 0 4 660 197 258 0 15 chr17 9873399 9873466 -85399185 + (TG)n Simple_repeat Simple_repeat 2 67 0 4 660 351 78 0 0 chr17 9874902 9874953 -85397698 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 660 530 296 65 6 chr17 9874953 9875123 -85397528 - B4 SINE B4 -103 189 10 4 660 1177 247 136 14 chr17 9875289 9875650 -85397001 + MTD LTR MaLR 1 405 -14 4 660 241 238 0 19 chr17 9875852 9875955 -85396696 + GA-rich Low_complexity Low_complexity 3 103 0 4 660 737 194 6 0 chr17 9877902 9878062 -85394589 + CT-rich Low_complexity Low_complexity 1 161 0 4 660 240 245 0 0 chr17 9879086 9879135 -85393516 + GA-rich Low_complexity Low_complexity 2 50 0 4 660 361 270 0 0 chr17 9879400 9879489 -85393162 - Lx7 LINE L1 -1942 5754 5666 4 660 4125 39 0 0 chr17 9880381 9880863 -85391788 + L1Md_T LINE L1 6090 6571 -11 4 660 810 253 5 5 chr17 9880877 9881064 -85391587 - ORR1D2 LTR MaLR -183 187 1 4 660 333 0 0 0 chr17 9881564 9881601 -85391050 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 660 541 40 26 0 chr17 9882312 9882388 -85390263 + (TC)n Simple_repeat Simple_repeat 2 79 0 4 660 315 0 0 0 chr17 9882388 9882422 -85390229 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 660 272 362 50 58 chr17 9884263 9884504 -85388147 + B4A SINE B4 69 290 -2 4 660 214 299 15 0 chr17 9884511 9884578 -85388073 + (CA)n Simple_repeat Simple_repeat 2 69 0 4 660 529 276 100 46 chr17 9886703 9886993 -85385658 - L1MA4 LINE L1 -376 5924 5593 4 660 209 182 146 0 chr17 9887637 9887692 -85384959 - L2a LINE L2 -27 3399 3337 5 660 664 133 8 8 chr17 9888171 9888250 -85384401 + (GA)n Simple_repeat Simple_repeat 2 80 0 5 660 1142 85 11 0 chr17 9888250 9888426 -85384225 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 5 660 664 133 8 8 chr17 9888426 9888467 -85384184 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 660 432 65 21 0 chr17 9889645 9889738 -85382913 + (TAGA)n Simple_repeat Simple_repeat 1 94 0 5 660 1106 67 20 20 chr17 9889751 9889996 -85382655 + (TAGA)n Simple_repeat Simple_repeat 1 245 0 5 660 263 95 0 0 chr17 9889999 9890041 -85382610 + MT2A LTR ERVL 488 529 -4 5 660 708 306 37 70 chr17 9891236 9891535 -85381116 + B4A SINE B4 1 289 -3 5 660 21 36 0 0 chr17 9891553 9891581 -85381070 + AT_rich Low_complexity Low_complexity 1 28 0 5 660 225 291 52 43 chr17 9891849 9891964 -85380687 + MTE2a LTR MaLR 254 369 -10 5 660 336 290 212 18 chr17 9892179 9892344 -85380307 - MLT1A LTR MaLR -159 215 19 5 660 1015 101 19 0 chr17 9893301 9893459 -85379192 - B2_Mm2 SINE B2 -5 190 30 5 660 210 71 0 0 chr17 9894114 9894142 -85378509 + (T)n Simple_repeat Simple_repeat 1 28 0 5 660 372 181 0 0 chr17 9894626 9894709 -85377942 + (CCA)n Simple_repeat Simple_repeat 1 83 0 5 660 487 244 64 104 chr17 9895288 9895539 -85377112 + L1MC LINE L1 3190 3430 -2716 5 660 273 29 0 0 chr17 9896448 9896482 -85376169 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 5 660 189 0 0 0 chr17 9896741 9896762 -85375889 + (A)n Simple_repeat Simple_repeat 1 21 0 5 660 1028 259 172 11 chr17 9897211 9897559 -85375092 - MTD LTR MaLR -4 415 12 5 660 429 339 40 58 chr17 9897784 9898110 -85374541 + L1MC LINE L1 5355 5674 -2208 5 660 481 305 7 7 chr17 9898465 9898607 -85374044 + RSINE1 SINE B4 2 143 -22 5 660 203 171 0 0 chr17 9898627 9898668 -85373983 + A-rich Low_complexity Low_complexity 1 41 0 5 660 255 325 0 100 chr17 9899514 9899644 -85373007 + MTEb LTR MaLR 241 357 -22 5 660 357 306 40 65 chr17 9899650 9899849 -85372802 + MLT1A1 LTR MaLR 203 396 -12 5 660 513 0 0 0 chr17 9899878 9899935 -85372716 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 660 255 211 0 0 chr17 9899938 9899995 -85372656 + GA-rich Low_complexity Low_complexity 2 58 0 5 660 1406 53 0 91 chr17 9900626 9900835 -85371816 + L1_Mus2 LINE L1 6377 6566 0 5 660 279 306 139 72 chr17 9902232 9902426 -85370225 + MER2 DNA MER2_type 1 207 -138 5 660 194 255 0 21 chr17 9903771 9903819 -85368832 - MIRb SINE MIR -26 242 196 5 660 1222 279 94 5 chr17 9904284 9904720 -85367931 + RMER5 LTR ERV1 44 518 -16 5 660 207 0 0 0 chr17 9905456 9905479 -85367172 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 660 200 301 27 0 chr17 9906155 9906228 -85366423 + GA-rich Low_complexity Low_complexity 3 77 0 5 660 368 53 26 39 chr17 9907007 9907085 -85365566 + (CAAAAA)n Simple_repeat Simple_repeat 2 78 0 5 660 1410 260 82 100 chr17 9908039 9908800 -85363851 + RLTR22_Mur LTR ERVK 1 747 -1101 5 660 764 228 121 68 chr17 9908895 9909312 -85363339 + RLTR22_Mur LTR ERVK 747 1573 -275 5 660 1254 41 0 0 chr17 9909339 9909486 -85363165 + B1_Mm SINE Alu 1 147 0 5 660 323 238 0 56 chr17 9909505 9909594 -85363057 + RLTR22_Mur LTR ERVK 1239 1322 0 5 660 1075 265 107 3 chr17 9909936 9910262 -85362389 + RMER15-int LTR ERVL 856 1215 -3784 5 660 404 198 59 59 chr17 9910484 9910586 -85362065 + RMER15-int LTR ERVL 1513 1614 -3385 5 660 6482 93 0 3 chr17 9910620 9911507 -85361144 - L1_Mus2 LINE L1 -421 5462 4579 5 660 7561 67 17 2 chr17 9911501 9912641 -85360010 + L1_Mus2 LINE L1 5409 6566 0 5 660 655 379 75 17 chr17 9912719 9913135 -85359516 + RMER15-int LTR ERVL 1710 2149 -2850 5 660 1361 306 74 12 chr17 9913332 9913929 -85358722 + RMER15-int LTR ERVL 4155 4788 -211 5 660 375 250 0 0 chr17 9913968 9914040 -85358611 + Lx8 LINE L1 6850 6921 -552 5 660 217 295 0 0 chr17 9914625 9914686 -85357965 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 5 660 1797 160 37 30 chr17 9916823 9917228 -85355423 - RMER17C LTR ERVK 0 410 3 5 660 324 0 0 0 chr17 9917343 9917379 -85355272 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 660 644 229 151 0 chr17 9917413 9917496 -85355155 - B4A SINE B4 -4 288 189 5 660 288 0 0 0 chr17 9917496 9917528 -85355123 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 660 644 229 151 0 chr17 9917528 9917610 -85355041 - B4A SINE B4 -104 188 100 5 660 302 232 0 47 chr17 9917788 9917960 -85354691 + (TATG)n Simple_repeat Simple_repeat 2 165 0 5 660 262 260 14 0 chr17 9917975 9918048 -85354603 + (TG)n Simple_repeat Simple_repeat 1 74 0 5 660 23 0 0 0 chr17 9918099 9918122 -85354529 + AT_rich Low_complexity Low_complexity 1 23 0 5 660 207 0 0 0 chr17 9920683 9920706 -85351945 + (CAAAAA)n Simple_repeat Simple_repeat 1 23 0 5 660 364 289 79 57 chr17 9920920 9921398 -85351253 + L1M5 LINE L1 4975 5462 -702 5 660 1211 215 34 108 chr17 9921878 9922259 -85350392 + ORR1D2 LTR MaLR 5 357 -13 5 660 4528 12 0 0 chr17 9923122 9923615 -85349036 + MT2_Mm LTR ERVL 1 493 0 5 660 6520 12 31 0 chr17 9923615 9924663 -85347988 + MERVL-int LTR ERVL 1 1081 -4404 5 660 19582 26 1 0 chr17 9924651 9926847 -85345804 + MERVL-int LTR ERVL 3164 5360 -125 5 660 347 179 46 35 chr17 9926847 9926934 -85345717 + ORR1D2-int LTR MaLR 553 640 -1323 5 660 321 0 0 0 chr17 9926934 9926972 -85345679 + MERVL-int LTR ERVL 5448 5485 0 5 660 4528 12 0 0 chr17 9926972 9927465 -85345186 + MT2_Mm LTR ERVL 1 493 0 5 660 3064 83 5 2 chr17 9927796 9928195 -85344456 + MTB LTR MaLR 1 400 0 5 660 281 267 12 0 chr17 9929492 9929578 -85343073 + (TA)n Simple_repeat Simple_repeat 1 87 0 5 660 564 312 87 0 chr17 9930026 9930244 -85342407 - B4 SINE B4 -20 272 36 5 660 481 59 0 0 chr17 9932492 9932560 -85340091 + L1Md_F3 LINE L1 6503 6570 -14 5 660 23 33 0 0 chr17 9932561 9932591 -85340060 + AT_rich Low_complexity Low_complexity 1 30 0 5 660 440 257 252 19 chr17 9932989 9933203 -85339448 - MTD LTR MaLR -155 264 1 5 660 1025 298 17 69 chr17 9933298 9933644 -85339007 + MTE2b LTR MaLR 52 379 0 5 660 23 33 0 0 chr17 9933664 9933694 -85338957 + AT_rich Low_complexity Low_complexity 1 30 0 5 660 255 243 146 0 chr17 9934851 9934995 -85337656 - Charlie5 DNA MER1_type -3 2621 2457 5 660 1917 87 26 46 chr17 9935782 9936085 -85336566 - ORR1A3 LTR MaLR -29 297 1 5 660 781 253 167 22 chr17 9936213 9936524 -85336127 - ORR1E LTR MaLR -2 357 2 5 660 852 160 11 11 chr17 9937564 9937741 -85334910 + GA-rich Low_complexity Low_complexity 2 178 0 5 660 203 261 14 0 chr17 9937753 9937822 -85334829 + GA-rich Low_complexity Low_complexity 1 70 0 5 660 1016 141 6 0 chr17 9937822 9937999 -85334652 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 5 660 612 313 117 26 chr17 9939344 9939770 -85332881 - RMER5 LTR ERV1 0 534 70 5 660 2266 85 0 0 chr17 9939877 9940195 -85332456 + ORR1A3 LTR MaLR 1 318 -8 5 660 2203 179 55 12 chr17 9940364 9940766 -85331885 + MTC LTR MaLR 3 421 0 5 660 459 317 61 0 chr17 9941423 9941653 -85330998 + MER45B DNA Tip100 469 712 -328 5 660 621 258 128 23 chr17 9941738 9941836 -85330815 + MLT1A0 LTR MaLR 81 187 -178 5 660 719 170 208 6 chr17 9941836 9942019 -85330632 - URR1B DNA MER1_type -1 224 5 5 660 621 258 128 23 chr17 9942019 9942178 -85330473 + MLT1A0 LTR MaLR 188 365 0 5 660 354 304 129 85 chr17 9942546 9942909 -85329742 - MTE2a LTR MaLR 0 379 1 5 660 340 267 33 0 chr17 9943232 9943322 -85329329 - B1F1 SINE Alu -56 93 1 5 660 245 278 101 36 chr17 9943877 9943959 -85328692 - B1F1 SINE Alu -1 148 71 5 660 657 0 0 0 chr17 9943959 9944032 -85328619 + (TC)n Simple_repeat Simple_repeat 1 73 0 5 660 245 278 101 36 chr17 9944032 9944087 -85328564 - B1F1 SINE Alu -79 70 3 5 660 256 351 13 26 chr17 9944422 9944577 -85328074 - L3 LINE CR1 -153 4336 4184 5 660 995 155 77 0 chr17 9945516 9945697 -85326954 + B2_Mm2 SINE B2 1 195 0 5 660 226 254 0 0 chr17 9945730 9945785 -85326866 - ID SINE ID -141 83 29 5 660 219 312 12 0 chr17 9945785 9945810 -85326841 - ID4 SINE ID -1 82 2 5 660 1959 129 74 9 chr17 9947846 9948183 -85324468 + ORR1B2 LTR MaLR 1 359 -8 5 660 546 323 79 65 chr17 9948200 9948478 -85324173 + B4A SINE B4 11 292 0 5 660 1325 162 141 31 chr17 9948524 9948843 -85323808 + ORR1B1 LTR MaLR 41 394 0 5 660 409 237 22 51 chr17 9948973 9949111 -85323540 + Lx8 LINE L1 7266 7399 -74 5 660 342 0 0 0 chr17 9950572 9950610 -85322041 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 660 324 0 0 0 chr17 9950976 9951012 -85321639 + (GA)n Simple_repeat Simple_repeat 2 37 0 5 660 472 120 109 0 chr17 9952215 9952307 -85320344 + Lx9 LINE L1 7543 7644 0 5 660 720 64 0 0 chr17 9954111 9954205 -85318446 + (TAGA)n Simple_repeat Simple_repeat 4 97 0 5 660 214 121 0 0 chr17 9955184 9955217 -85317434 + B3 SINE B2 1 33 -183 5 660 234 0 0 0 chr17 9955769 9955795 -85316856 + (A)n Simple_repeat Simple_repeat 1 26 0 5 660 684 67 0 0 chr17 9956437 9956527 -85316124 + (GA)n Simple_repeat Simple_repeat 1 90 0 5 660 213 39 0 0 chr17 9956738 9956764 -85315887 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 5 660 483 100 0 0 chr17 9957430 9957500 -85315151 + (GGA)n Simple_repeat Simple_repeat 2 71 0 5 660 266 250 18 91 chr17 9957576 9957686 -85314965 - ID_B1 SINE B4 -2 222 121 5 660 501 311 12 47 chr17 9959724 9959893 -85312758 + RSINE1 SINE B4 3 165 0 5 660 237 265 0 0 chr17 9959901 9959984 -85312667 + (CA)n Simple_repeat Simple_repeat 1 83 0 5 660 336 301 80 43 chr17 9960364 9960527 -85312124 - MIRb SINE MIR -8 260 92 5 660 609 126 27 44 chr17 9960642 9960825 -85311826 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 660 718 118 42 21 chr17 9960848 9961185 -85311466 + (TG)n Simple_repeat Simple_repeat 1 344 0 5 661 204 231 0 0 chr17 9962287 9962326 -85310325 + (TGGA)n Simple_repeat Simple_repeat 3 41 0 5 661 890 58 53 25 chr17 9962678 9962820 -85309831 + B2_Mm2 SINE B2 2 154 -39 5 661 796 91 15 0 chr17 9962820 9962952 -85309699 + (TAGA)n Simple_repeat Simple_repeat 4 137 0 5 661 749 153 73 83 chr17 9962952 9963001 -85309650 + B2_Mm1t SINE B2 155 191 -2 5 661 330 298 39 0 chr17 9964367 9964471 -85308180 - RSINE1 SINE B4 -15 150 43 5 661 630 229 0 0 chr17 9964802 9964981 -85307670 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 661 274 277 128 73 chr17 9965128 9965455 -85307196 - L1M2 LINE L1 -1717 4426 4082 5 661 27 29 0 0 chr17 9965689 9965723 -85306928 + AT_rich Low_complexity Low_complexity 1 34 0 5 661 383 242 0 20 chr17 9965863 9965978 -85306673 + PB1D7 SINE Alu 4 113 -7 6 661 192 125 0 0 chr17 9965980 9966012 -85306639 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 6 661 609 276 33 20 chr17 9966998 9967215 -85305436 - B3A SINE B2 0 216 2 6 661 744 159 0 0 chr17 9969093 9969231 -85303420 + CT-rich Low_complexity Low_complexity 1 138 0 6 661 297 0 0 0 chr17 9969485 9969518 -85303133 + (A)n Simple_repeat Simple_repeat 1 33 0 6 661 659 292 72 8 chr17 9970686 9970921 -85301730 - B4 SINE B4 -1 291 42 6 661 258 32 0 0 chr17 9971019 9971050 -85301601 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 661 755 292 28 70 chr17 9971054 9971338 -85301313 - B4 SINE B4 -20 272 1 6 661 537 92 0 0 chr17 9972011 9972087 -85300564 + (CTG)n Simple_repeat Simple_repeat 2 77 0 6 661 4274 66 7 0 chr17 9972899 9973443 -85299208 - L1_Mus3 LINE L1 0 6638 6091 6 661 2920 30 0 3 chr17 9973443 9973781 -85298870 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 661 56831 21 13 7 chr17 9973781 9980214 -85292437 - IAPEz-int LTR ERVK 0 6481 8 6 661 2920 30 0 3 chr17 9980214 9980552 -85292099 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 661 4280 57 0 0 chr17 9980552 9981294 -85291357 - L1_Mus3 LINE L1 -542 6096 5355 6 661 557 300 134 15 chr17 9982409 9982670 -85289981 + B4A SINE B4 1 292 0 6 661 279 133 0 0 chr17 9982687 9982732 -85289919 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 661 1354 166 26 93 chr17 9983319 9983664 -85288987 + RLTRETN_Mm LTR ERVK 1 322 0 6 661 353 22 22 0 chr17 9984221 9984267 -85288384 + (TAA)n Simple_repeat Simple_repeat 2 48 0 6 661 682 243 7 0 chr17 9985545 9985685 -85286966 - RSINE1 SINE B4 -22 143 3 6 661 3970 63 40 16 chr17 9986179 9986729 -85285922 + MusHAL1 LINE L1 2150 2712 0 6 661 1127 82 7 0 chr17 9986732 9986879 -85285772 + B1_Mus1 SINE Alu 1 148 0 6 661 393 259 76 0 chr17 9987149 9987280 -85285371 + L1MD1 LINE L1 4488 4628 -1518 6 661 365 305 82 46 chr17 9987497 9987779 -85284872 + L1MD1 LINE L1 4789 5080 -1066 6 661 508 253 106 11 chr17 9987979 9988243 -85284408 + L1MD1 LINE L1 5290 5578 -781 6 661 359 311 99 10 chr17 9988431 9988623 -85284028 + L1MD1 LINE L1 5828 6036 -206 6 661 204 40 0 0 chr17 9989126 9989151 -85283500 + (T)n Simple_repeat Simple_repeat 1 25 0 6 661 198 0 0 0 chr17 9989370 9989392 -85283259 + (A)n Simple_repeat Simple_repeat 1 22 0 6 661 438 69 0 0 chr17 9990306 9990364 -85282287 + (TGGA)n Simple_repeat Simple_repeat 4 61 0 6 661 3508 54 27 4 chr17 9990434 9990919 -85281732 - LTRIS2 LTR ERV1 0 564 69 6 661 371 283 71 25 chr17 9991413 9991609 -85281042 + L1M5 LINE L1 4150 4354 -1792 6 661 479 312 70 0 chr17 9991623 9991751 -85280900 + RSINE1 SINE B4 5 141 -24 6 661 380 20 0 20 chr17 9991751 9991801 -85280850 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 661 468 264 9 0 chr17 9991875 9991981 -85280670 + B1F2 SINE Alu 43 149 0 6 661 201 74 0 0 chr17 9991993 9992020 -85280631 + (A)n Simple_repeat Simple_repeat 1 27 0 6 661 653 311 35 9 chr17 9992653 9992883 -85279768 - B4A SINE B4 -1 291 56 6 661 351 300 141 9 chr17 9993231 9993501 -85279150 - L1MD LINE L1 -2948 3198 2885 6 661 234 0 0 0 chr17 9993501 9993527 -85279124 + (ATTG)n Simple_repeat Simple_repeat 2 27 0 6 661 351 300 141 9 chr17 9993527 9993589 -85279062 - L1MD LINE L1 -3262 2884 2823 6 661 267 315 112 96 chr17 9993669 9994304 -85278347 + L1MCb LINE L1 65 709 -5336 6 661 533 273 57 31 chr17 9994972 9995165 -85277486 - B3A SINE B2 0 198 1 6 661 451 302 119 27 chr17 9997201 9997494 -85275157 - L1MC3 LINE L1 -476 7309 6990 6 661 606 174 149 0 chr17 9998037 9998158 -85274493 + B1_Mm SINE Alu 9 147 0 6 661 10200 3 1 0 chr17 9998162 10000000 -85272651 + L1Md_A LINE L1 214 2052 -3831 6 661 31803 5 0 2 chr17 10000000 10003542 -85269109 + L1Md_A LINE L1 2053 5586 -297 1 661 9222 2 0 0 chr17 10003542 10004538 -85268113 + L1Md_A LINE L1 5587 6582 0 1 661 21 89 0 0 chr17 10004538 10004594 -85268057 + AT_rich Low_complexity Low_complexity 1 56 0 2 661 21 71 0 0 chr17 10004807 10004849 -85267802 + AT_rich Low_complexity Low_complexity 1 42 0 3 661 249 146 0 0 chr17 10004851 10004899 -85267752 + (A)n Simple_repeat Simple_repeat 1 48 0 4 661 279 247 141 0 chr17 10005212 10005297 -85267354 + L1MA9 LINE L1 6062 6158 -154 5 661 232 280 13 13 chr17 10006779 10006855 -85265796 - ID4_ SINE ID -5 78 3 6 661 360 247 0 0 chr17 10007010 10007164 -85265487 + (TG)n Simple_repeat Simple_repeat 2 155 0 7 661 618 302 50 7 chr17 10007219 10007417 -85265234 - B3A SINE B2 -14 202 2 8 661 183 156 0 0 chr17 10007644 10007676 -85264975 + T-rich Low_complexity Low_complexity 1 32 0 9 661 339 295 32 0 chr17 10007841 10007936 -85264715 + B1F1 SINE Alu 1 98 -51 1 661 758 312 12 55 chr17 10007989 10008335 -85264316 + Lx7 LINE L1 6840 7170 -526 1 661 449 284 27 107 chr17 10008351 10008443 -85264208 + Lx8 LINE L1 7154 7226 -247 1 661 321 26 0 0 chr17 10008443 10008481 -85264170 + (GA)n Simple_repeat Simple_repeat 2 39 0 1 661 449 284 27 107 chr17 10008481 10008613 -85264038 + Lx8 LINE L1 7227 7360 -113 1 661 198 0 0 0 chr17 10008622 10008644 -85264007 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 1 661 319 176 0 29 chr17 10009577 10009647 -85263004 + RLTR11A2 LTR ERVK 1 68 -459 1 661 2187 271 86 51 chr17 10009655 10010589 -85262062 - MTD-int LTR MaLR -284 974 9 1 661 1047 289 90 23 chr17 10010597 10010951 -85261700 - MTD LTR MaLR 0 419 42 1 661 1199 68 0 0 chr17 10011022 10011169 -85261482 - B1_Mus2 SINE Alu 0 147 1 1 661 1382 232 64 25 chr17 10011887 10012286 -85260365 + MTE2b LTR MaLR 10 376 -43 1 661 261 0 0 0 chr17 10013110 10013139 -85259512 + (A)n Simple_repeat Simple_repeat 1 29 0 1 661 465 328 30 69 chr17 10014444 10014749 -85257902 + MER45R DNA Tip100 481 773 -808 2 661 679 253 28 11 chr17 10014738 10014918 -85257733 - B4 SINE B4 -108 184 2 2 661 704 270 11 6 chr17 10016646 10016825 -85255826 - B3A SINE B2 -18 180 1 2 661 1107 134 0 0 chr17 10018394 10018700 -85253951 + (CA)n Simple_repeat Simple_repeat 1 306 0 2 661 316 264 112 41 chr17 10019404 10019574 -85253077 + L1MA6 LINE L1 6109 6290 -10 2 661 733 199 8 17 chr17 10020821 10021062 -85251589 + GA-rich Low_complexity Low_complexity 1 238 0 2 661 264 364 123 9 chr17 10021202 10021429 -85251222 - MLT1A0 LTR MaLR -81 284 32 2 661 714 24 0 0 chr17 10022156 10022240 -85250411 + (TAGA)n Simple_repeat Simple_repeat 4 87 0 2 661 442 311 17 11 chr17 10023255 10023506 -85249145 + (CATA)n Simple_repeat Simple_repeat 1 252 0 2 661 379 259 7 33 chr17 10023519 10023829 -85248822 + (CATATA)n Simple_repeat Simple_repeat 1 301 0 2 661 300 231 144 19 chr17 10024358 10024531 -85248120 - Lx7 LINE L1 -17 7679 7506 3 661 1658 256 57 37 chr17 10024553 10025043 -85247608 - Lx7 LINE L1 -374 7322 6823 3 661 2236 219 137 23 chr17 10025782 10026433 -85246218 - RMER19A LTR ERVK -12 725 1 3 661 1639 155 41 21 chr17 10026736 10027220 -85245431 + RLTR11A LTR ERVK 7 528 0 3 661 345 252 73 18 chr17 10027220 10027329 -85245322 + Lx8 LINE L1 7265 7379 -94 3 661 28 0 0 0 chr17 10027399 10027427 -85245224 + AT_rich Low_complexity Low_complexity 1 28 0 3 661 1550 25 0 12 chr17 10030883 10031128 -85241523 + (TATATG)n Simple_repeat Simple_repeat 1 241 0 3 661 183 42 0 0 chr17 10031650 10031674 -85240977 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 661 698 234 7 0 chr17 10031694 10031839 -85240812 - RSINE1 SINE B4 -17 148 3 3 661 35 0 0 0 chr17 10031949 10031984 -85240667 + AT_rich Low_complexity Low_complexity 1 35 0 3 661 513 0 0 0 chr17 10032570 10032627 -85240024 + (TC)n Simple_repeat Simple_repeat 2 58 0 3 661 495 0 0 0 chr17 10032627 10032681 -85239970 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 661 207 195 24 0 chr17 10032943 10032984 -85239667 + GA-rich Low_complexity Low_complexity 2 43 0 4 661 4069 47 2 0 chr17 10033053 10033577 -85239074 - L1Md_T LINE L1 0 6582 6088 4 661 1887 116 0 78 chr17 10034517 10034864 -85237787 + ORR1A4 LTR MaLR 1 320 -9 4 661 775 227 117 28 chr17 10034878 10035091 -85237560 + MTE2b LTR MaLR 4 235 -144 4 661 610 304 43 70 chr17 10035092 10035393 -85237258 + MT2A LTR ERVL 155 447 -86 4 661 389 290 104 5 chr17 10035475 10035676 -85236975 + Ricksha_c DNA MuDR 680 900 -1148 4 661 394 258 75 6 chr17 10036065 10036225 -85236426 + Tigger2b DNA MER2_type 138 308 -418 4 661 1092 237 72 58 chr17 10036435 10036780 -85235871 - MTE2b LTR MaLR -5 374 25 4 661 677 311 58 40 chr17 10038086 10038364 -85234287 + B4A SINE B4 6 288 -4 4 661 374 302 63 53 chr17 10038933 10039234 -85233417 + Charlie18a DNA MER1_type 26 329 -13 5 661 435 241 31 0 chr17 10040345 10040465 -85232186 - MIRb SINE MIR -109 159 28 5 661 736 317 27 37 chr17 10040535 10040830 -85231821 + B4 SINE B4 1 292 0 5 661 818 198 6 0 chr17 10041308 10041485 -85231166 + GA-rich Low_complexity Low_complexity 3 180 0 5 661 772 221 77 30 chr17 10043998 10044166 -85228485 + B3A SINE B2 2 177 -21 5 661 294 73 0 0 chr17 10044166 10044207 -85228444 + (CAGA)n Simple_repeat Simple_repeat 4 44 0 5 661 2449 173 164 49 chr17 10044208 10044756 -85227895 - RMER19C LTR ERVK 0 611 1 5 661 246 81 0 0 chr17 10044757 10044794 -85227857 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 5 661 1189 178 174 0 chr17 10044881 10045140 -85227511 - MTD LTR MaLR -98 321 18 5 661 2116 149 102 67 chr17 10045981 10046412 -85226239 + RLTR41 LTR ERV1 1 446 0 5 661 896 249 173 16 chr17 10047713 10047962 -85224689 - MTE2a LTR MaLR 0 379 92 6 661 1540 157 87 65 chr17 10047963 10048136 -85224515 + ORR1C2 LTR MaLR 20 189 -195 6 661 444 19 0 0 chr17 10048136 10048189 -85224462 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 6 661 1158 78 0 0 chr17 10048189 10048368 -85224283 + (TC)n Simple_repeat Simple_repeat 1 180 0 6 661 1540 157 87 65 chr17 10048368 10048548 -85224103 + ORR1C2 LTR MaLR 190 381 -3 6 661 1938 267 103 60 chr17 10048621 10049814 -85222837 - MTE2a-int LTR MaLR -5 1575 3 6 661 979 260 114 87 chr17 10049817 10050184 -85222467 - MTE2a LTR MaLR -2 377 1 6 661 474 291 18 0 chr17 10052852 10053017 -85219634 - B3A SINE B2 -16 182 15 6 661 1355 198 99 33 chr17 10053229 10053594 -85219057 + Lx9 LINE L1 7240 7628 -16 6 661 372 59 0 0 chr17 10055501 10055552 -85217099 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 661 551 258 77 32 chr17 10056438 10056594 -85216057 + RSINE1 SINE B4 3 165 0 6 661 498 17 0 0 chr17 10057581 10057640 -85215011 + (TG)n Simple_repeat Simple_repeat 1 59 0 6 661 1158 152 0 19 chr17 10057994 10058202 -85214449 - RMER10B LTR ERVL 0 398 195 7 661 616 107 10 10 chr17 10058205 10058309 -85214342 + (GA)n Simple_repeat Simple_repeat 1 104 0 7 661 234 146 0 0 chr17 10058322 10058363 -85214288 + RMER17C LTR ERVK 7 47 -363 7 661 844 283 9 9 chr17 10058557 10058778 -85213873 - B4A SINE B4 -14 278 58 7 661 246 284 12 0 chr17 10059609 10059690 -85212961 + (CATA)n Simple_repeat Simple_repeat 1 82 0 7 661 757 240 97 52 chr17 10059735 10060025 -85212626 - Lx8 LINE L1 -32 7441 7139 7 661 1321 172 5 5 chr17 10060460 10060682 -85211969 + URR1A DNA MER1_type 5 226 0 7 661 24 32 0 0 chr17 10062130 10062161 -85210490 + AT_rich Low_complexity Low_complexity 1 31 0 7 661 385 274 45 30 chr17 10062443 10062575 -85210076 + B1F SINE Alu 2 135 -14 7 661 1224 41 0 0 chr17 10062579 10062726 -85209925 + B1_Mus2 SINE Alu 1 147 0 7 661 2121 200 43 13 chr17 10064252 10064717 -85207934 + RLTR16 LTR ERVK 27 505 0 8 661 463 252 63 0 chr17 10065100 10065211 -85207440 + MTEa LTR MaLR 3 120 -259 8 661 412 288 120 44 chr17 10065471 10065696 -85206955 + MTEa LTR MaLR 138 379 0 8 661 229 217 56 28 chr17 10065928 10065999 -85206652 + MTE2b LTR MaLR 293 365 -14 8 661 192 40 0 0 chr17 10067571 10067596 -85205055 + (CAAAAA)n Simple_repeat Simple_repeat 6 30 0 8 661 227 214 0 0 chr17 10067838 10067894 -85204757 + U3 snRNA snRNA 1 56 -161 8 661 217 276 81 10 chr17 10068143 10068242 -85204409 - MIRc SINE MIR -125 143 38 8 661 473 287 53 35 chr17 10068582 10068828 -85203823 - L1M5 LINE L1 -2562 5433 5170 8 661 483 279 13 25 chr17 10068830 10068988 -85203663 - L1MEc LINE L1 -6191 209 54 8 661 227 79 26 0 chr17 10069190 10069228 -85203423 + (CAAAA)n Simple_repeat Simple_repeat 1 39 0 8 661 383 18 0 0 chr17 10069229 10069286 -85203365 + L1Md_F3 LINE L1 6527 6583 -1 8 661 370 291 21 59 chr17 10069902 10070088 -85202563 - MLT1C LTR MaLR -288 179 1 9 661 654 256 27 59 chr17 10070380 10070600 -85202051 + B4 SINE B4 2 214 -78 9 661 212 254 15 15 chr17 10070611 10070679 -85201972 + (CA)n Simple_repeat Simple_repeat 1 68 0 9 661 573 354 97 32 chr17 10071697 10072254 -85200397 - L1M5 LINE L1 -1699 4447 3855 8 661 521 240 0 6 chr17 10073875 10074051 -85198600 + (CA)n Simple_repeat Simple_repeat 1 175 0 9 661 307 26 0 0 chr17 10074226 10074265 -85198386 + HAL1-3A_ME LINE L1 1973 2011 -847 9 661 317 125 0 18 chr17 10074265 10074322 -85198329 + (CACG)n Simple_repeat Simple_repeat 4 59 0 9 661 449 271 19 35 chr17 10074630 10074848 -85197803 + L1MA4A LINE L1 5805 6022 -278 9 661 1045 309 16 2 chr17 10075481 10075919 -85196732 - L1M2 LINE L1 -2583 3560 3117 9 661 722 162 0 7 chr17 10076487 10076624 -85196027 + GA-rich Low_complexity Low_complexity 2 137 0 9 661 788 191 6 0 chr17 10078515 10078693 -85193958 + (TG)n Simple_repeat Simple_repeat 2 180 0 9 661 254 233 0 11 chr17 10078720 10078807 -85193844 + (TATATG)n Simple_repeat Simple_repeat 1 86 0 1 661 704 177 11 33 chr17 10078837 10079018 -85193633 + (TATG)n Simple_repeat Simple_repeat 2 178 0 1 661 324 0 0 0 chr17 10080410 10080446 -85192205 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 661 296 326 64 64 chr17 10080738 10080974 -85191677 - L1MA7 LINE L1 0 6291 6056 1 661 244 304 0 0 chr17 10083219 10083275 -85189376 + ID2 SINE ID 22 77 -6 1 661 217 204 0 36 chr17 10084215 10084271 -85188380 + (CAGA)n Simple_repeat Simple_repeat 3 56 0 1 661 1473 140 9 0 chr17 10084694 10084916 -85187735 + URR1B DNA MER1_type 1 224 -1 1 661 511 28 14 0 chr17 10089056 10089128 -85183523 + B1_Mm SINE Alu 75 147 0 1 661 185 35 0 65 chr17 10090275 10090306 -85182345 + (CAAAAA)n Simple_repeat Simple_repeat 4 32 0 1 661 933 167 122 11 chr17 10091373 10091561 -85181090 - B3 SINE B2 -6 210 2 1 662 984 247 185 0 chr17 10092612 10092952 -85179699 - MTD LTR MaLR -16 403 1 1 662 392 224 26 70 chr17 10093892 10094007 -85178644 + B1F SINE Alu 6 115 -2 1 662 1054 120 6 6 chr17 10094044 10094220 -85178431 + (GGAA)n Simple_repeat Simple_repeat 4 179 0 1 662 215 236 55 0 chr17 10094272 10094327 -85178324 + B4 SINE B4 8 65 -227 1 662 225 0 0 0 chr17 10094327 10094352 -85178299 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 662 315 0 0 0 chr17 10094352 10094386 -85178265 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 662 1130 71 0 0 chr17 10094390 10094531 -85178120 + B1_Mm SINE Alu 1 141 -6 1 662 572 50 0 12 chr17 10094533 10094614 -85178037 + (GA)n Simple_repeat Simple_repeat 2 81 0 1 662 514 235 50 22 chr17 10094614 10094753 -85177898 + B4 SINE B4 140 282 -10 1 662 26 0 0 0 chr17 10095500 10095526 -85177125 + AT_rich Low_complexity Low_complexity 1 26 0 1 662 225 0 0 0 chr17 10095996 10096021 -85176630 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 662 324 0 0 0 chr17 10096021 10096056 -85176595 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 662 216 77 38 19 chr17 10098693 10098746 -85173905 + (CAAAAA)n Simple_repeat Simple_repeat 2 55 0 1 662 27 49 0 0 chr17 10099675 10099716 -85172935 + AT_rich Low_complexity Low_complexity 1 41 0 1 662 277 233 40 27 chr17 10100141 10100216 -85172435 - ORR1D2 LTR MaLR -285 85 10 1 662 252 86 0 0 chr17 10100363 10100398 -85172253 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 1 662 887 125 7 29 chr17 10100398 10100538 -85172113 + B1_Mur4 SINE Alu 2 138 -12 1 662 195 42 0 0 chr17 10100538 10100562 -85172089 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 1 662 564 237 36 84 chr17 10100566 10100732 -85171919 - MTD LTR MaLR -39 380 223 1 662 825 40 0 0 chr17 10101261 10101362 -85171289 + (CA)n Simple_repeat Simple_repeat 1 101 0 1 662 1121 6 44 0 chr17 10102289 10102447 -85170204 + (TC)n Simple_repeat Simple_repeat 2 166 0 1 662 211 147 26 39 chr17 10102512 10102590 -85170061 + (TCTCTG)n Simple_repeat Simple_repeat 2 78 0 1 662 346 84 14 27 chr17 10102899 10102972 -85169679 + (TTTTTG)n Simple_repeat Simple_repeat 1 72 0 1 662 312 27 0 0 chr17 10104428 10104465 -85168186 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 1 662 960 163 204 0 chr17 10104465 10104637 -85168014 - B3 SINE B2 -9 207 1 1 662 281 268 97 18 chr17 10104854 10104968 -85167683 - MIRb SINE MIR -121 147 25 1 662 383 317 8 16 chr17 10106051 10106176 -85166475 + GA-rich Low_complexity Low_complexity 3 126 0 1 662 749 90 107 0 chr17 10107431 10107553 -85165098 + B1_Mus1 SINE Alu 13 147 -1 1 662 217 172 0 49 chr17 10107558 10107619 -85165032 + GA-rich Low_complexity Low_complexity 3 60 0 1 662 1079 104 6 0 chr17 10107622 10107786 -85164865 + (GAGAA)n Simple_repeat Simple_repeat 1 165 0 1 662 21 0 0 0 chr17 10108451 10108472 -85164179 + AT_rich Low_complexity Low_complexity 1 21 0 1 662 387 0 0 0 chr17 10108780 10108823 -85163828 + (TAA)n Simple_repeat Simple_repeat 1 43 0 1 662 719 297 50 0 chr17 10109554 10109756 -85162895 - B3 SINE B2 -4 212 1 1 662 581 276 23 40 chr17 10109771 10109972 -85162679 - B3A SINE B2 -1 194 1 1 662 2155 100 103 3 chr17 10110003 10110363 -85162288 + RLTR9B2 LTR ERVK 1 396 -24 1 662 265 310 133 25 chr17 10110670 10111216 -85161435 + L1ME3 LINE L1 5341 5955 -207 1 662 247 328 0 0 chr17 10111424 10111482 -85161169 + PB1D10 SINE Alu 3 60 -57 1 662 207 88 0 0 chr17 10111538 10111572 -85161079 + (TTTTG)n Simple_repeat Simple_repeat 1 34 0 1 662 7453 99 23 14 chr17 10111631 10111930 -85160721 + L1_Mur2 LINE L1 3538 3848 -2029 1 662 384 22 0 0 chr17 10111930 10111975 -85160676 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 662 7453 99 23 14 chr17 10111975 10112806 -85159845 + L1_Mur2 LINE L1 3849 4677 -1200 1 662 305 297 11 0 chr17 10112806 10112897 -85159754 + B1_Mur2 SINE Alu 57 148 -1 1 662 21 0 0 0 chr17 10112899 10112920 -85159731 + AT_rich Low_complexity Low_complexity 1 21 0 1 662 1695 169 42 7 chr17 10113196 10113506 -85159145 + ORR1C1 LTR MaLR 58 378 0 1 662 285 337 0 0 chr17 10113531 10113629 -85159022 + PB1D10 SINE Alu 11 108 -9 1 662 249 175 62 0 chr17 10114020 10114100 -85158551 + (TCTA)n Simple_repeat Simple_repeat 3 87 0 1 662 1219 269 14 28 chr17 10114228 10114580 -85158071 + ORR1E LTR MaLR 8 354 -5 1 662 814 216 18 0 chr17 10116118 10116285 -85156366 + B3A SINE B2 7 176 -22 1 662 342 0 0 0 chr17 10116469 10116507 -85156144 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 662 238 168 25 42 chr17 10116536 10116654 -85155997 + (CA)n Simple_repeat Simple_repeat 2 117 0 1 662 354 125 0 0 chr17 10116673 10116729 -85155922 + HAL1-3A_ME LINE L1 1977 2032 -826 1 662 1922 108 24 51 chr17 10116732 10117063 -85155588 + RLTRETN_Mm LTR ERVK 1 322 0 1 662 969 83 38 0 chr17 10117346 10117478 -85155173 - B1_Mm SINE Alu -10 137 1 1 662 872 138 7 0 chr17 10120181 10120333 -85152318 - URR1B DNA MER1_type -5 220 68 1 662 723 206 0 0 chr17 10121706 10121871 -85150780 + (CA)n Simple_repeat Simple_repeat 2 166 0 1 662 398 212 10 0 chr17 10121889 10121988 -85150663 + (CA)n Simple_repeat Simple_repeat 1 100 0 1 662 379 224 20 10 chr17 10122208 10122307 -85150344 - MTE2b LTR MaLR -35 344 245 1 662 180 0 0 0 chr17 10123223 10123243 -85149408 + (A)n Simple_repeat Simple_repeat 1 20 0 1 662 284 310 40 31 chr17 10123910 10124078 -85148573 + MIRb SINE MIR 46 218 -58 1 662 597 271 93 10 chr17 10125017 10125267 -85147384 - MLT1C LTR MaLR 0 505 200 1 662 616 205 0 12 chr17 10125639 10125812 -85146839 + (CA)n Simple_repeat Simple_repeat 1 171 0 1 662 563 216 27 27 chr17 10125915 10126221 -85146430 + (CATA)n Simple_repeat Simple_repeat 1 306 0 1 662 21 0 0 0 chr17 10126269 10126290 -85146361 + AT_rich Low_complexity Low_complexity 1 21 0 1 662 2294 148 16 8 chr17 10126923 10127298 -85145353 + ORR1C1 LTR MaLR 1 378 0 1 662 627 335 33 36 chr17 10127373 10127732 -85144919 - Lx8 LINE L1 -53 7420 7063 1 662 304 259 8 132 chr17 10128735 10128864 -85143787 - PB1 SINE Alu -6 114 2 1 662 286 289 13 0 chr17 10129207 10129283 -85143368 - MIRb SINE MIR -157 111 35 1 662 826 208 209 9 chr17 10129894 10130335 -85142316 - MT2A LTR ERVL -5 528 1 1 662 2228 154 6 0 chr17 10131928 10132286 -85140365 + Lx4A LINE L1 6694 7053 -5 1 662 224 220 20 0 chr17 10132334 10132384 -85140267 + GA-rich Low_complexity Low_complexity 6 56 0 1 662 384 283 93 67 chr17 10132836 10133029 -85139622 + B3A SINE B2 1 198 0 1 662 323 225 0 0 chr17 10133746 10133817 -85138834 + MER63B DNA AcHobo 323 393 -43 1 662 305 348 79 31 chr17 10133918 10134209 -85138442 - L1MEg LINE L1 -4598 1817 1513 1 662 1772 174 13 51 chr17 10134341 10134716 -85137935 - ORR1C1 LTR MaLR -15 363 3 1 662 270 212 58 23 chr17 10134918 10135005 -85137646 - L1MEg LINE L1 -5232 1168 1079 1 662 235 343 164 20 chr17 10135369 10135771 -85136880 - L1MEg LINE L1 -5784 616 157 1 662 567 219 88 22 chr17 10137519 10137701 -85134950 - B3A SINE B2 0 198 5 1 662 401 287 17 0 chr17 10137934 10138049 -85134602 - HAL1 LINE L1 -772 1735 1619 1 662 516 202 79 0 chr17 10138059 10138173 -85134478 + RLTR11A2 LTR ERVK 1 123 -405 1 662 992 178 14 24 chr17 10138145 10138358 -85134293 + RLTR11A2 LTR ERVK 272 482 -45 1 662 230 329 0 14 chr17 10139319 10139393 -85133258 - HAL1 LINE L1 -2434 73 1 1 662 535 343 25 10 chr17 10139410 10139613 -85133038 + MLT1H LTR MaLR 39 244 -305 1 662 226 307 117 48 chr17 10139624 10139812 -85132839 + MLT1H LTR MaLR 349 549 0 1 662 470 154 0 8 chr17 10140071 10140202 -85132449 + (CAGAGA)n Simple_repeat Simple_repeat 1 130 0 1 662 754 249 28 22 chr17 10141416 10141597 -85131054 - B3A SINE B2 -16 182 1 1 662 291 250 296 13 chr17 10141769 10141928 -85130723 + MTE2a LTR MaLR 176 379 0 1 662 182 321 151 36 chr17 10142214 10142353 -85130298 + L2a LINE L2 3271 3425 -1 1 662 402 21 0 0 chr17 10142611 10142658 -85129993 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 662 1840 281 84 19 chr17 10142671 10143280 -85129371 + Lx9 LINE L1 6357 7010 -634 1 662 2212 134 23 52 chr17 10143280 10143665 -85128986 + ORR1C1 LTR MaLR 3 376 -2 1 662 1840 281 84 19 chr17 10143665 10143698 -85128953 + Lx9 LINE L1 7011 7041 -603 1 662 3074 154 60 48 chr17 10143705 10143819 -85128832 + Lx5 LINE L1 6444 6568 -482 1 662 2757 98 122 11 chr17 10143819 10144253 -85128398 - RLTR45 LTR ERVK 0 482 1 1 662 3074 154 60 48 chr17 10144253 10144738 -85127913 + Lx5 LINE L1 6569 7050 0 1 662 763 287 92 37 chr17 10144746 10145259 -85127392 + Lx9 LINE L1 7022 7597 -47 1 662 244 286 0 54 chr17 10145769 10145843 -85126808 + ID_B1 SINE B4 147 216 -8 1 662 201 262 0 0 chr17 10145863 10145905 -85126746 + GA-rich Low_complexity Low_complexity 2 43 0 1 662 311 22 65 0 chr17 10146838 10146884 -85125767 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1 662 279 93 0 0 chr17 10147319 10147362 -85125289 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 662 182 250 39 65 chr17 10148267 10148344 -85124307 + L2c LINE L2 3282 3356 -31 1 662 1561 155 194 8 chr17 10148405 10148760 -85123891 - MTC LTR MaLR 0 421 1 1 662 1211 141 19 5 chr17 10148930 10149137 -85123514 + URR1B DNA MER1_type 16 225 0 1 662 699 244 161 4 chr17 10149638 10149881 -85122770 + B4A SINE B4 1 281 -11 2 662 536 280 95 60 chr17 10150760 10150992 -85121659 + B4A SINE B4 5 244 -48 2 662 229 174 43 0 chr17 10150994 10151040 -85121611 + (CATG)n Simple_repeat Simple_repeat 2 49 0 2 662 900 72 0 0 chr17 10151306 10151431 -85121220 + (TC)n Simple_repeat Simple_repeat 2 126 0 2 662 186 43 0 0 chr17 10151459 10151482 -85121169 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 662 900 263 36 36 chr17 10151514 10151766 -85120885 - B4 SINE B4 0 292 41 2 662 1036 275 85 50 chr17 10152356 10152793 -85119858 + MLT2B2 LTR ERVL 1 452 -63 2 662 2515 297 42 7 chr17 10152896 10153761 -85118890 - RCHARR1 DNA MER1_type -28 946 52 2 662 312 245 30 35 chr17 10153908 10154000 -85118651 - PB1D7 SINE Alu -3 124 33 2 662 22 35 0 0 chr17 10154022 10154051 -85118600 + AT_rich Low_complexity Low_complexity 1 29 0 2 662 504 279 82 6 chr17 10156267 10156426 -85116225 - ID_B1 SINE B4 -53 171 1 2 662 2021 138 95 38 chr17 10156564 10156934 -85115717 - ORR1B1 LTR MaLR -3 391 1 2 662 572 203 75 8 chr17 10157068 10157202 -85115449 - MTD LTR MaLR 0 419 277 2 662 367 326 110 87 chr17 10157380 10157827 -85114824 - MLT1C LTR MaLR 0 467 11 2 662 261 0 0 0 chr17 10158646 10158675 -85113976 + (GGA)n Simple_repeat Simple_repeat 3 31 0 2 662 432 0 0 0 chr17 10158675 10158723 -85113928 + (GA)n Simple_repeat Simple_repeat 1 48 0 2 662 225 0 0 0 chr17 10158724 10158749 -85113902 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 2 662 225 0 0 0 chr17 10159346 10159371 -85113280 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 2 662 297 208 0 40 chr17 10162010 10162110 -85110541 + GA-rich Low_complexity Low_complexity 1 96 0 2 662 232 238 33 132 chr17 10162315 10162436 -85110215 - MLT1A0 LTR MaLR -238 127 19 2 662 283 308 14 34 chr17 10164993 10165141 -85107510 + CT-rich Low_complexity Low_complexity 3 147 0 2 662 271 275 66 0 chr17 10165301 10165392 -85107259 + MTEa LTR MaLR 279 375 -4 2 662 535 249 4 12 chr17 10165818 10166066 -85106585 + (CA)n Simple_repeat Simple_repeat 1 245 0 2 662 2408 128 3 0 chr17 10166067 10166412 -85106239 - ORR1A1 LTR MaLR 0 346 1 2 662 717 279 28 6 chr17 10166620 10166831 -85105820 + ID_B1 SINE B4 5 229 -63 2 662 799 277 88 8 chr17 10169537 10169788 -85102863 + B4 SINE B4 2 272 -20 2 662 357 24 0 0 chr17 10172015 10172057 -85100594 + (CAAAAA)n Simple_repeat Simple_repeat 1 42 0 2 662 337 284 78 10 chr17 10172744 10172847 -85099804 - RSINE1 SINE B4 -39 126 17 2 662 799 72 66 0 chr17 10173059 10173226 -85099425 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 2 662 243 0 0 0 chr17 10173250 10173277 -85099374 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 2 662 694 294 35 0 chr17 10173279 10173480 -85099171 - ID_B1 SINE B4 -15 209 2 2 662 225 0 0 0 chr17 10173728 10173753 -85098898 + (A)n Simple_repeat Simple_repeat 1 25 0 2 662 638 268 172 11 chr17 10174005 10174284 -85098367 + ORR1E LTR MaLR 1 324 -35 2 662 232 25 75 0 chr17 10174425 10174465 -85098186 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 2 662 431 264 43 18 chr17 10174522 10174709 -85097942 - L1M3 LINE L1 -575 5614 5427 2 662 1979 121 101 0 chr17 10174837 10175134 -85097517 + ORR1A2 LTR MaLR 1 327 0 2 662 1092 128 85 25 chr17 10175134 10175334 -85097317 - URR1A DNA MER1_type -14 212 1 2 662 925 231 72 108 chr17 10177854 10178242 -85094409 - MTD LTR MaLR -33 386 13 2 662 417 164 12 37 chr17 10178620 10178702 -85093949 + B4 SINE B4 3 82 -210 2 662 291 200 21 53 chr17 10178702 10178715 -85093936 + B3A SINE B2 3 94 -104 2 662 1734 143 15 136 chr17 10179310 10179722 -85092929 + ORR1D1 LTR MaLR 1 362 -12 2 662 233 360 22 81 chr17 10181095 10181231 -85091420 + MIRb SINE MIR 131 258 -10 2 662 535 296 29 6 chr17 10184121 10184291 -85088360 - B4 SINE B4 -117 175 2 2 662 456 19 0 0 chr17 10184670 10184723 -85087928 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 662 665 327 41 8 chr17 10184755 10185023 -85087628 - B4 SINE B4 -14 278 2 2 662 258 312 65 0 chr17 10185208 10185301 -85087350 - MLT1A LTR MaLR -232 142 44 2 662 444 173 164 0 chr17 10185407 10185509 -85087142 - URR1B DNA MER1_type 0 225 107 2 662 1354 160 205 14 chr17 10185509 10185933 -85086718 + RLTR16 LTR ERVK 1 505 0 2 662 379 294 9 9 chr17 10185935 10186045 -85086606 - URR1B DNA MER1_type -115 110 1 2 662 232 262 0 71 chr17 10186124 10186194 -85086457 + MIRb SINE MIR 125 189 -79 2 662 444 318 0 31 chr17 10187395 10187525 -85085126 - RSINE1 SINE B4 -31 134 9 2 662 429 269 25 12 chr17 10188828 10188990 -85083661 - HAL1-2a_MD LINE L1 -514 2510 2347 2 662 662 0 0 141 chr17 10189002 10189151 -85083500 + (ATGGTG)n Simple_repeat Simple_repeat 5 132 0 2 662 271 293 54 40 chr17 10189361 10189602 -85083049 + MLT2B3 LTR ERVL 283 509 -45 2 662 331 269 73 58 chr17 10189615 10189767 -85082884 + Lx9 LINE L1 7366 7516 -128 2 662 279 0 0 0 chr17 10189767 10189798 -85082853 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 662 331 269 73 58 chr17 10189798 10189905 -85082746 + Lx9 LINE L1 7517 7629 -15 2 662 272 387 0 39 chr17 10190385 10190405 -85082246 + ID_B1 SINE B4 64 213 -11 2 662 402 291 29 15 chr17 10190405 10190541 -85082110 + B1F SINE Alu 1 138 -11 2 662 849 225 128 5 chr17 10190828 10191016 -85081635 + B3 SINE B2 1 211 -5 2 662 359 262 0 9 chr17 10191032 10191145 -85081506 + ID4_ SINE ID 4 113 -39 2 662 22 35 0 0 chr17 10191161 10191190 -85081461 + AT_rich Low_complexity Low_complexity 1 29 0 2 662 232 246 116 0 chr17 10191489 10191558 -85081093 + ID4 SINE ID 1 77 -6 2 662 809 267 58 21 chr17 10192175 10192416 -85080235 + B4A SINE B4 32 281 -11 2 662 441 0 0 0 chr17 10192418 10192467 -85080184 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 662 202 274 186 0 chr17 10192545 10192647 -85080004 - MIR SINE MIR -114 148 28 2 662 650 292 27 86 chr17 10194695 10194987 -85077664 + B4A SINE B4 12 286 -6 2 662 379 211 23 6 chr17 10195041 10195213 -85077438 + (CA)n Simple_repeat Simple_repeat 2 176 0 2 662 244 184 29 19 chr17 10195249 10195354 -85077297 + (CA)n Simple_repeat Simple_repeat 1 106 0 2 662 225 296 72 42 chr17 10195684 10195850 -85076801 - MamRep434 DNA TcMar -225 201 31 2 662 226 154 0 0 chr17 10196015 10196054 -85076597 - MLT2C2 LTR ERVL -3 556 518 2 662 209 263 0 26 chr17 10196073 10196151 -85076500 + (CAGA)n Simple_repeat Simple_repeat 3 78 0 2 662 213 39 0 0 chr17 10196157 10196183 -85076468 + (CATA)n Simple_repeat Simple_repeat 2 27 0 2 662 562 108 38 15 chr17 10196183 10196305 -85076346 + (TAGA)n Simple_repeat Simple_repeat 3 128 0 2 662 288 0 0 0 chr17 10196305 10196337 -85076314 + (CATA)n Simple_repeat Simple_repeat 1 32 0 2 662 562 108 38 15 chr17 10196337 10196346 -85076305 + (TAGA)n Simple_repeat Simple_repeat 1 9 0 2 662 213 65 0 0 chr17 10196346 10196377 -85076274 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 2 662 645 300 77 18 chr17 10196683 10196955 -85075696 + B4 SINE B4 2 289 -3 2 662 22 0 0 0 chr17 10196965 10196987 -85075664 + AT_rich Low_complexity Low_complexity 1 22 0 2 662 6715 59 19 0 chr17 10197052 10197877 -85074774 + L1_Mus1 LINE L1 5727 6567 0 2 662 227 196 0 0 chr17 10197880 10197931 -85074720 + A-rich Low_complexity Low_complexity 1 51 0 2 662 315 288 0 0 chr17 10198043 10198123 -85074528 + (TG)n Simple_repeat Simple_repeat 1 80 0 2 662 1518 178 76 119 chr17 10198123 10198180 -85074471 - ORR1C1 LTR MaLR 0 378 322 2 662 297 0 0 0 chr17 10198180 10198213 -85074438 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 2 662 1518 178 76 119 chr17 10198213 10198345 -85074306 - ORR1C1 LTR MaLR -57 321 184 2 662 219 36 0 0 chr17 10198345 10198373 -85074278 + (GA)n Simple_repeat Simple_repeat 2 29 0 2 662 1518 178 76 119 chr17 10198373 10198431 -85074220 - ORR1C1 LTR MaLR -195 183 156 2 662 441 0 0 0 chr17 10198431 10198480 -85074171 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 662 1518 178 76 119 chr17 10198480 10198625 -85074026 - ORR1C1 LTR MaLR -223 155 3 2 662 315 288 0 0 chr17 10198625 10198697 -85073954 + (TG)n Simple_repeat Simple_repeat 1 72 0 2 662 288 111 0 0 chr17 10199186 10199231 -85073420 + (TCC)n Simple_repeat Simple_repeat 2 46 0 2 662 2667 58 6 0 chr17 10199240 10199565 -85073086 + ORR1A2 LTR MaLR 1 327 0 2 662 201 108 0 0 chr17 10199607 10199644 -85073007 + (TCTG)n Simple_repeat Simple_repeat 3 39 0 2 662 601 268 65 5 chr17 10200024 10200238 -85072413 + MER2 DNA MER2_type 106 332 -13 2 662 606 109 0 0 chr17 10200362 10200454 -85072197 + (TA)n Simple_repeat Simple_repeat 2 93 0 2 662 505 301 66 55 chr17 10200975 10201246 -85071405 + B4 SINE B4 1 274 -18 2 662 292 241 84 42 chr17 10201998 10202141 -85070510 - L1ME4a LINE L1 -5 6119 5971 2 662 343 286 26 35 chr17 10202270 10202386 -85070265 + PB1D10 SINE Alu 1 115 -2 2 662 252 264 137 14 chr17 10202395 10202468 -85070183 + ID4_ SINE ID 2 83 0 2 662 309 135 0 0 chr17 10202578 10202630 -85070021 + (ATGGTG)n Simple_repeat Simple_repeat 4 55 0 2 662 218 220 0 17 chr17 10202722 10202782 -85069869 + CT-rich Low_complexity Low_complexity 3 61 0 2 662 932 206 31 40 chr17 10205154 10205381 -85067270 + B4A SINE B4 68 292 0 2 662 255 300 14 0 chr17 10205575 10205645 -85067006 + (TATG)n Simple_repeat Simple_repeat 4 74 0 2 662 323 258 109 36 chr17 10206208 10206373 -85066278 - L1M5 LINE L1 -529 5650 5474 2 662 504 236 0 0 chr17 10206382 10206635 -85066016 + (TG)n Simple_repeat Simple_repeat 1 253 0 2 662 216 227 31 10 chr17 10206620 10206718 -85065933 + (TATATG)n Simple_repeat Simple_repeat 5 104 0 2 662 513 301 34 88 chr17 10206765 10207027 -85065624 - B4A SINE B4 -37 255 8 3 662 227 248 115 47 chr17 10207163 10207311 -85065340 - L1MD LINE L1 -3499 2647 2490 3 662 210 205 0 0 chr17 10207472 10207511 -85065140 - ID4 SINE ID -14 69 31 3 662 227 212 75 15 chr17 10208339 10208406 -85064245 - B1F SINE Alu -1 148 78 3 662 2546 42 0 0 chr17 10209417 10209723 -85062928 - L1Md_F2 LINE L1 -3 6579 6274 3 662 23 0 0 0 chr17 10209733 10209756 -85062895 + AT_rich Low_complexity Low_complexity 1 23 0 3 662 612 223 7 20 chr17 10210011 10210162 -85062489 + B1F SINE Alu 1 149 0 3 662 198 0 0 0 chr17 10210287 10210309 -85062342 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 3 662 217 299 23 11 chr17 10210325 10210413 -85062238 + PB1D10 SINE Alu 29 117 0 3 662 204 352 97 21 chr17 10210951 10211137 -85061514 - L2 LINE L2 -492 2927 2728 3 662 25108 57 0 6 chr17 10212271 10216128 -85056523 - L1Md_F2 LINE L1 0 6582 2748 3 662 383 265 7 0 chr17 10216858 10217009 -85055642 + (TG)n Simple_repeat Simple_repeat 1 152 0 3 662 562 324 0 17 chr17 10217037 10217213 -85055438 + (TG)n Simple_repeat Simple_repeat 1 173 0 3 662 360 284 10 0 chr17 10217343 10217445 -85055206 + PB1 SINE Alu 14 116 -11 3 662 666 266 60 87 chr17 10217701 10218001 -85054650 + B4A SINE B4 1 292 0 3 662 219 88 0 0 chr17 10218002 10218036 -85054615 + (GA)n Simple_repeat Simple_repeat 1 34 0 3 662 189 0 0 0 chr17 10219045 10219066 -85053585 + (TTG)n Simple_repeat Simple_repeat 2 22 0 3 662 1935 147 6 55 chr17 10219157 10219523 -85053128 + RMER1C Other Other 995 1342 0 3 662 1122 115 38 31 chr17 10220684 10221002 -85051649 + (TAGA)n Simple_repeat Simple_repeat 1 319 0 3 662 195 120 93 0 chr17 10221014 10221089 -85051562 + (TAGA)n Simple_repeat Simple_repeat 4 85 0 3 662 567 139 8 17 chr17 10221330 10221447 -85051204 + CT-rich Low_complexity Low_complexity 1 116 0 3 662 255 211 88 0 chr17 10221864 10221921 -85050730 - RMER30 DNA MER1_type -1 201 140 3 662 647 151 0 8 chr17 10222835 10222962 -85049689 + GA-rich Low_complexity Low_complexity 1 126 0 3 662 484 253 171 81 chr17 10223180 10223438 -85049213 - RMER13B LTR ERVK 0 908 628 3 82 1942 216 83 71 chr17 10223440 10224217 -85048434 - RMER17B LTR ERVK -183 775 2 3 663 1092 227 129 10 chr17 10225940 10226243 -85046408 - MTE2b LTR MaLR -40 339 1 3 663 216 191 24 0 chr17 10226291 10226333 -85046318 + GA-rich Low_complexity Low_complexity 4 46 0 3 663 368 250 34 11 chr17 10226898 10226987 -85045664 + B3A SINE B2 1 91 -107 3 663 1605 158 79 17 chr17 10227235 10227525 -85045126 - MTC LTR MaLR -10 411 104 3 663 1291 174 27 0 chr17 10227525 10227744 -85044907 - URR1A DNA MER1_type 0 226 2 3 663 637 188 9 0 chr17 10227744 10227855 -85044796 - MTC LTR MaLR -309 112 1 3 663 838 247 95 40 chr17 10227908 10228233 -85044418 + RLTR15 LTR ERVK 1 343 -16 3 663 1271 179 28 0 chr17 10228955 10229167 -85043484 + URR1B DNA MER1_type 1 218 -7 3 663 514 190 0 20 chr17 10229546 10229648 -85043003 - PB1D9 SINE Alu 0 120 21 3 663 1114 96 82 33 chr17 10229797 10229981 -85042670 + B2_Mm2 SINE B2 2 194 -1 3 663 772 278 55 34 chr17 10231776 10231973 -85040678 - MTE2b LTR MaLR -24 355 148 3 663 1609 155 6 152 chr17 10231973 10232453 -85040198 + RMER17C LTR ERVK 1 410 0 3 663 772 278 55 34 chr17 10232453 10232490 -85040161 - MTE2b LTR MaLR -232 147 116 3 663 23 0 0 0 chr17 10233132 10233155 -85039496 + AT_rich Low_complexity Low_complexity 1 23 0 3 663 636 284 124 66 chr17 10234281 10234643 -85038008 + MLT1B LTR MaLR 1 383 -7 3 663 517 284 97 129 chr17 10236737 10237016 -85035635 - MLT1A LTR MaLR -24 350 81 3 663 283 195 131 92 chr17 10238041 10238171 -85034480 + MTEa LTR MaLR 230 364 -15 3 663 2607 129 62 19 chr17 10239504 10239937 -85032714 - RLTR11B LTR ERVK -1 452 1 3 663 234 367 27 18 chr17 10239994 10240105 -85032546 + MLT1C LTR MaLR 356 467 0 3 663 1303 243 48 116 chr17 10240377 10240619 -85032032 + MTE2b LTR MaLR 7 230 -149 3 663 771 48 0 0 chr17 10240619 10240723 -85031928 + (TC)n Simple_repeat Simple_repeat 1 104 0 3 663 1303 243 48 116 chr17 10240723 10240876 -85031775 + MTE2b LTR MaLR 231 375 -4 3 663 381 93 0 0 chr17 10241288 10241342 -85031309 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 663 311 23 47 0 chr17 10242958 10243001 -85029650 + (TTTTC)n Simple_repeat Simple_repeat 1 45 0 3 663 682 148 125 0 chr17 10244650 10244778 -85027873 + URR1A DNA MER1_type 34 177 -49 3 663 351 78 78 0 chr17 10244859 10244910 -85027741 - ORR1A2 LTR MaLR 0 326 272 3 663 273 149 0 0 chr17 10244910 10244977 -85027674 + (TTTTTG)n Simple_repeat Simple_repeat 3 69 0 3 663 1202 54 0 0 chr17 10244979 10245127 -85027524 - B1_Mus1 SINE Alu 0 148 1 3 663 1252 61 18 6 chr17 10245127 10245293 -85027358 - ORR1A2 LTR MaLR -42 285 118 3 663 341 89 0 0 chr17 10245295 10245340 -85027311 + URR1A DNA MER1_type 181 225 -1 3 663 2659 49 3 18 chr17 10245589 10245921 -85026730 + ORR1A2 LTR MaLR 1 327 0 3 663 183 42 0 0 chr17 10247037 10247061 -85025590 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 663 380 146 0 0 chr17 10247230 10247285 -85025366 - ORR1C1 LTR MaLR -2 376 322 3 663 635 269 83 58 chr17 10247690 10247895 -85024756 + B4 SINE B4 81 290 -2 3 663 308 189 32 32 chr17 10248003 10248129 -85024522 + (TATG)n Simple_repeat Simple_repeat 4 129 0 3 663 226 284 27 13 chr17 10248160 10248235 -85024416 + (TG)n Simple_repeat Simple_repeat 1 76 0 3 663 378 289 154 20 chr17 10248292 10248493 -85024158 - B4 SINE B4 -53 239 12 3 663 273 302 94 0 chr17 10248657 10248763 -85023888 + MamRep434 DNA TcMar 46 161 -265 3 663 675 229 114 75 chr17 10249373 10249628 -85023023 - ORR1D2 LTR MaLR -105 265 1 3 663 751 278 94 16 chr17 10249734 10250041 -85022610 + MLT1B LTR MaLR 60 390 0 3 663 786 304 47 93 chr17 10251866 10252167 -85020484 + B4A SINE B4 5 291 -1 3 663 2545 282 82 39 chr17 10252484 10253444 -85019207 + Lx7 LINE L1 6328 7329 -367 3 663 282 29 0 0 chr17 10253464 10253499 -85019152 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 3 663 413 336 55 34 chr17 10255388 10255625 -85017026 - MER121 Unknown Unknown -143 269 28 3 663 290 364 85 28 chr17 10255785 10255997 -85016654 - MIRc SINE MIR -14 254 31 3 663 836 291 59 124 chr17 10257137 10257525 -85015126 - MTE2a LTR MaLR -14 365 3 3 663 549 153 0 0 chr17 10258692 10258752 -85013899 + polypurine Low_complexity Low_complexity 2 61 0 3 663 1199 91 0 6 chr17 10258752 10258928 -85013723 + (GAGAA)n Simple_repeat Simple_repeat 5 179 0 3 663 549 153 0 0 chr17 10258928 10258965 -85013686 + polypurine Low_complexity Low_complexity 62 98 0 3 663 855 308 67 48 chr17 10260285 10260616 -85012035 + MTE2b LTR MaLR 43 379 0 3 663 188 327 69 10 chr17 10260751 10260853 -85011798 - MIR SINE MIR -67 141 34 3 663 479 238 68 74 chr17 10261372 10261535 -85011116 + RSINE1 SINE B4 4 165 0 3 663 608 201 4 8 chr17 10261535 10261779 -85010872 + (CA)n Simple_repeat Simple_repeat 1 242 0 3 663 471 314 8 0 chr17 10262005 10262123 -85010528 + ID_B1 SINE B4 84 202 -22 3 663 252 0 0 0 chr17 10263541 10263569 -85009082 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 663 696 231 72 15 chr17 10263571 10263763 -85008888 - B3 SINE B2 -17 181 1 3 663 188 374 28 18 chr17 10264207 10264316 -85008335 + MIR SINE MIR 37 146 -116 3 663 239 264 0 11 chr17 10264321 10264413 -85008238 + GA-rich Low_complexity Low_complexity 3 93 0 3 663 3035 228 120 19 chr17 10264985 10265655 -85006996 - RCHARR1 DNA MER1_type -67 907 171 3 663 189 0 0 0 chr17 10265655 10265676 -85006975 + (CACAA)n Simple_repeat Simple_repeat 5 25 0 3 663 3035 228 120 19 chr17 10265676 10265829 -85006822 - RCHARR1 DNA MER1_type -804 170 3 3 663 1701 148 156 9 chr17 10266962 10267282 -85005369 + ORR1B2 LTR MaLR 1 367 0 3 663 459 276 29 29 chr17 10267330 10267468 -85005183 - MER20 DNA MER1_type -81 138 1 3 663 419 75 30 0 chr17 10267604 10267671 -85004980 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 3 663 14055 78 41 6 chr17 10268737 10270414 -85002237 + L1VL2 LINE L1 313 2048 -1567 3 663 234 0 0 0 chr17 10270414 10270440 -85002211 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 3 663 14055 76 30 3 chr17 10270440 10271343 -85001308 + L1VL2 LINE L1 2049 2982 -633 3 663 648 172 117 52 chr17 10271982 10272268 -85000383 + RMER10A LTR ERVL 1 423 -19 3 663 312 234 203 67 chr17 10272506 10272895 -84999756 - RMER10A LTR ERVL 0 442 1 3 663 195 69 0 0 chr17 10273389 10273418 -84999233 + (CCCCCA)n Simple_repeat Simple_repeat 1 29 0 3 663 389 350 0 0 chr17 10274111 10274251 -84998400 + (CA)n Simple_repeat Simple_repeat 1 140 0 3 663 362 283 37 73 chr17 10274323 10274487 -84998164 - RLTR21 LTR ERVK -318 1254 1097 3 663 293 270 112 0 chr17 10274750 10274839 -84997812 + MIRc SINE MIR 98 196 -72 3 663 274 314 73 112 chr17 10277495 10277626 -84995025 + MT2B LTR ERVL 42 177 -424 3 663 2549 75 6 0 chr17 10277626 10277946 -84994705 - ORR1A2 LTR MaLR -4 323 2 3 663 274 314 73 112 chr17 10277946 10278047 -84994604 + MT2B LTR ERVL 178 265 -336 3 663 664 211 30 15 chr17 10277948 10278083 -84994568 + B1_Mur2 SINE Alu 13 149 0 3 663 608 194 7 0 chr17 10278257 10278401 -84994250 + CT-rich Low_complexity Low_complexity 2 146 0 3 663 1073 119 0 11 chr17 10278402 10278581 -84994070 + (TCTCCC)n Simple_repeat Simple_repeat 4 180 0 3 663 253 296 0 0 chr17 10278584 10278638 -84994013 - PB1D9 SINE Alu -65 55 2 3 663 659 344 32 59 chr17 10278963 10279303 -84993348 + MLT1I LTR MaLR 81 411 0 3 663 334 272 0 0 chr17 10279425 10279506 -84993145 + MER104 DNA Tc2 66 146 -35 3 663 21 0 0 0 chr17 10280096 10280117 -84992534 + AT_rich Low_complexity Low_complexity 1 21 0 3 663 273 125 0 0 chr17 10281062 10281118 -84991533 + (TC)n Simple_repeat Simple_repeat 1 56 0 3 663 537 92 0 0 chr17 10281129 10281205 -84991446 + (CA)n Simple_repeat Simple_repeat 2 77 0 3 663 215 333 49 47 chr17 10281214 10281332 -84991319 - MIR SINE MIR -126 142 23 4 663 277 340 85 0 chr17 10281587 10281693 -84990958 + Tigger5 DNA MER2_type 2291 2405 -1 4 663 384 338 112 52 chr17 10281861 10282250 -84990401 + MLT1B LTR MaLR 5 408 -59 4 663 484 225 197 0 chr17 10282333 10282475 -84990176 - Tigger7 DNA MER2_type -38 2453 2284 4 663 269 250 0 0 chr17 10282479 10282539 -84990112 - Tigger7 DNA MER2_type -2373 118 59 4 663 229 211 47 47 chr17 10283336 10283505 -84989146 + (TAGA)n Simple_repeat Simple_repeat 3 171 0 4 663 479 168 12 18 chr17 10283541 10283705 -84988946 + (TAGA)n Simple_repeat Simple_repeat 2 164 0 4 663 1317 255 78 46 chr17 10284329 10284699 -84987952 + MTD LTR MaLR 18 399 -20 4 663 2622 252 188 34 chr17 10284718 10285727 -84986924 + MTD-int LTR MaLR 1 1165 -93 4 663 435 217 43 11 chr17 10285732 10285825 -84986826 + PB1D10 SINE Alu 13 108 -9 4 663 796 236 80 0 chr17 10290381 10290580 -84982071 - ID_B1 SINE B4 -8 216 2 4 663 254 275 77 0 chr17 10291531 10291545 -84981106 - ID_B1 SINE B4 -125 99 2 4 663 255 338 13 0 chr17 10291545 10291622 -84981029 - ID4_ SINE ID -4 79 2 4 663 257 343 61 68 chr17 10292332 10292405 -84980246 - B4A SINE B4 -76 216 105 4 663 305 185 19 0 chr17 10292405 10292459 -84980192 - PB1D9 SINE Alu -57 63 9 4 663 257 343 61 68 chr17 10292459 10292479 -84980172 - B4A SINE B4 -76 104 71 4 663 711 314 35 59 chr17 10292504 10292792 -84979859 - MLT1A0 LTR MaLR -16 349 69 4 663 255 349 123 44 chr17 10292994 10293246 -84979405 + MLT1F-int LTR MaLR 10 281 -1128 4 663 395 321 87 50 chr17 10293298 10293606 -84979045 + MLT1F-int LTR MaLR 397 783 -706 4 663 1024 129 0 0 chr17 10295024 10295163 -84977488 + B1_Mus1 SINE Alu 1 139 -9 4 663 285 29 0 0 chr17 10295163 10295197 -84977454 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 4 663 1745 233 53 12 chr17 10295600 10296030 -84976621 - Lx8 LINE L1 -741 6732 6285 4 663 308 301 157 41 chr17 10296790 10296987 -84975664 + LTR50 LTR ERVL 4 223 -572 4 663 283 323 144 59 chr17 10298886 10299192 -84973459 + MamGypLTR3 LTR Gypsy 498 829 -10 4 663 333 0 0 0 chr17 10299265 10299302 -84973349 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 663 518 327 126 15 chr17 10299341 10299602 -84973049 - B4A SINE B4 -2 290 1 4 663 538 221 52 52 chr17 10299704 10299838 -84972813 - RSINE1 SINE B4 -31 134 1 4 663 209 316 8 33 chr17 10301070 10301191 -84971460 + (TG)n Simple_repeat Simple_repeat 1 118 0 4 663 1936 87 7 17 chr17 10301193 10301523 -84971128 + L1_Mus4 LINE L1 6343 6636 0 4 663 200 235 14 42 chr17 10301523 10301594 -84971057 + (TG)n Simple_repeat Simple_repeat 1 69 0 4 663 323 96 0 19 chr17 10301617 10301670 -84970981 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 663 403 292 10 30 chr17 10301713 10301812 -84970839 - RSINE1 SINE B4 0 165 69 4 663 335 255 69 52 chr17 10301833 10301949 -84970702 - B4A SINE B4 -169 123 6 4 663 280 250 0 0 chr17 10302490 10302546 -84970105 + tRNA-Ala-GCY_ tRNA tRNA 2 57 -18 4 663 587 304 9 69 chr17 10303054 10303287 -84969364 - MER20 DNA MER1_type 0 219 1 4 663 201 330 42 59 chr17 10303471 10303590 -84969061 + MIR SINE MIR 116 232 -30 4 663 297 0 0 0 chr17 10303663 10303696 -84968955 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 663 526 287 112 27 chr17 10303981 10304239 -84968412 + B4 SINE B4 2 281 -11 4 663 1182 236 84 34 chr17 10304547 10304902 -84967749 + ORR1D1 LTR MaLR 2 374 0 4 663 540 0 0 0 chr17 10306185 10306245 -84966406 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 663 180 111 0 0 chr17 10306422 10306449 -84966202 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 663 953 258 151 9 chr17 10306666 10306998 -84965653 + MTE2b LTR MaLR 1 379 0 4 663 183 250 0 0 chr17 10307480 10307548 -84965103 + (TTGG)n Simple_repeat Simple_repeat 4 71 0 4 663 869 256 37 5 chr17 10307612 10307828 -84964823 + ID_B1 SINE B4 2 224 0 4 663 2714 191 84 24 chr17 10308066 10308651 -84964000 - Lx2B LINE L1 -5 6995 6376 4 663 569 94 0 7 chr17 10308648 10308738 -84963913 + Lx2B LINE L1 5944 6029 -1021 4 663 1377 208 80 97 chr17 10308982 10309344 -84963307 - MTE2a LTR MaLR -3 376 21 4 663 402 284 23 0 chr17 10309811 10309899 -84962752 + PB1 SINE Alu 21 110 -17 4 663 376 229 20 20 chr17 10309916 10310063 -84962588 + G-rich Low_complexity Low_complexity 5 151 0 4 663 201 108 26 26 chr17 10310477 10310515 -84962136 + GA-rich Low_complexity Low_complexity 3 40 0 4 663 431 295 123 73 chr17 10311131 10311391 -84961260 + B4 SINE B4 2 274 -18 4 663 189 107 0 0 chr17 10311405 10311433 -84961218 + (CATA)n Simple_repeat Simple_repeat 2 29 0 4 663 785 79 9 0 chr17 10311445 10311559 -84961092 + (TC)n Simple_repeat Simple_repeat 1 115 0 4 663 324 48 0 0 chr17 10311559 10311600 -84961051 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 663 1278 273 16 49 chr17 10311924 10312294 -84960357 - MTEa LTR MaLR -21 358 1 4 663 190 222 29 100 chr17 10313018 10313088 -84959563 + L3 LINE CR1 2148 2212 -2277 4 663 21 0 0 0 chr17 10313647 10313668 -84958983 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 758 259 13 0 chr17 10313690 10313848 -84958803 - RSINE1 SINE B4 0 165 6 4 663 3073 145 23 23 chr17 10314229 10314757 -84957894 - RLTR11A LTR ERVK 0 528 1 4 663 228 67 0 0 chr17 10314886 10314916 -84957735 + (CAGA)n Simple_repeat Simple_repeat 1 30 0 4 663 582 15 0 0 chr17 10315569 10315636 -84957015 + (TC)n Simple_repeat Simple_repeat 1 67 0 4 663 403 285 11 108 chr17 10316312 10316497 -84956154 + L1M2 LINE L1 5173 5339 -804 4 663 454 70 28 0 chr17 10316497 10316568 -84956083 + (TG)n Simple_repeat Simple_repeat 1 73 0 4 663 690 280 12 12 chr17 10316592 10316762 -84955889 - B4A SINE B4 0 292 123 4 663 305 319 28 56 chr17 10316776 10316919 -84955732 - B4A SINE B4 -152 140 2 4 663 762 241 190 30 chr17 10317134 10317434 -84955217 + MTD LTR MaLR 58 405 -14 4 663 189 0 0 0 chr17 10318294 10318315 -84954336 + (A)n Simple_repeat Simple_repeat 1 21 0 4 663 256 342 14 14 chr17 10318379 10318527 -84954124 + GA-rich Low_complexity Low_complexity 3 150 0 4 663 771 11 0 0 chr17 10319020 10319108 -84953543 + (GA)n Simple_repeat Simple_repeat 1 88 0 4 663 692 296 26 13 chr17 10319249 10319457 -84953194 + ID_B1 SINE B4 32 246 -46 4 663 190 182 0 52 chr17 10319458 10319516 -84953135 + A-rich Low_complexity Low_complexity 1 55 0 4 663 320 125 0 15 chr17 10319702 10319767 -84952884 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 663 421 325 97 97 chr17 10319867 10320228 -84952423 - MLT1A0 LTR MaLR -2 363 3 4 663 446 232 43 66 chr17 10322232 10322382 -84950269 - B1_Mur1 SINE Alu 0 149 3 4 663 215 322 87 92 chr17 10322382 10322442 -84950209 - B4A SINE B4 -208 84 26 4 663 211 214 17 35 chr17 10322639 10322678 -84949973 + A-rich Low_complexity Low_complexity 3 40 0 4 663 579 66 0 0 chr17 10322678 10322754 -84949897 + (GGAA)n Simple_repeat Simple_repeat 3 78 0 4 663 211 214 17 35 chr17 10322754 10322772 -84949879 + A-rich Low_complexity Low_complexity 41 59 0 4 663 2055 224 66 42 chr17 10323695 10324240 -84948411 + RLTR20B3 LTR ERVK 1 558 -19 4 663 351 305 105 0 chr17 10324495 10324700 -84947951 - L1MA4 LINE L1 -362 5938 5702 4 663 191 36 36 0 chr17 10324929 10324957 -84947694 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4 663 267 305 45 30 chr17 10326701 10326833 -84945818 + MER5B DNA MER1_type 38 171 -7 4 663 315 0 0 0 chr17 10327495 10327530 -84945121 + (TC)n Simple_repeat Simple_repeat 2 36 0 4 663 232 327 58 29 chr17 10328562 10328666 -84943985 + MIRb SINE MIR 104 210 -58 4 663 908 156 97 17 chr17 10330086 10330262 -84942389 + RMER19C LTR ERVK 420 609 -2 4 663 270 0 0 0 chr17 10331642 10331672 -84940979 + (CCA)n Simple_repeat Simple_repeat 1 30 0 4 663 473 252 113 0 chr17 10332081 10332196 -84940455 + B4A SINE B4 119 246 -46 4 663 827 112 104 0 chr17 10332199 10332324 -84940327 + B1_Mus1 SINE Alu 3 140 -8 4 663 229 197 0 29 chr17 10332570 10332638 -84940013 + G-rich Low_complexity Low_complexity 4 69 0 4 663 358 338 66 133 chr17 10333083 10333401 -84939250 + MLT1J-int LTR MaLR 454 718 -669 4 663 666 0 0 0 chr17 10333401 10333475 -84939176 + (TTTCC)n Simple_repeat Simple_repeat 4 77 0 4 663 358 338 66 133 chr17 10333475 10333668 -84938983 + MLT1J-int LTR MaLR 719 932 -455 4 663 787 154 274 0 chr17 10333668 10333843 -84938808 + URR1B DNA MER1_type 3 225 0 4 663 358 338 66 133 chr17 10333843 10333894 -84938757 + MLT1J-int LTR MaLR 933 979 -408 4 663 4039 152 90 49 chr17 10334018 10334852 -84937799 - RMER19B LTR ERVK -12 890 49 4 663 281 140 0 17 chr17 10335395 10335453 -84937198 + GA-rich Low_complexity Low_complexity 4 60 0 4 663 275 292 67 36 chr17 10335455 10335679 -84936972 + HAL1 LINE L1 1161 1391 -1116 4 663 345 375 18 0 chr17 10336360 10336472 -84936179 - L1MD LINE L1 -2245 3901 3788 4 663 381 200 65 12 chr17 10337197 10337326 -84935325 - MLT2C2 LTR ERVL -225 189 6 4 663 255 304 56 28 chr17 10337674 10337816 -84934835 + MERVL_2A-int LTR ERVL 3422 3567 -2194 4 663 2462 130 2 33 chr17 10339412 10339809 -84932842 + RMER4A LTR ERVK 2 386 -80 4 663 713 116 0 18 chr17 10339825 10339939 -84932712 + RMER4A LTR ERVK 347 458 -8 4 663 228 224 134 0 chr17 10339936 10340003 -84932648 - MER5A DNA MER1_type -113 76 1 4 663 202 286 32 0 chr17 10340007 10340070 -84932581 - L3b LINE CR1 -394 88 24 4 663 438 290 78 56 chr17 10341437 10341538 -84931113 - RMER30 DNA MER1_type 0 202 102 4 663 1250 87 53 21 chr17 10341538 10341726 -84930925 - B2_Mm2 SINE B2 -1 194 1 4 663 438 290 78 56 chr17 10341726 10341789 -84930862 - RMER30 DNA MER1_type -101 101 30 4 663 2053 177 47 8 chr17 10341789 10342153 -84930498 - ORR1C1 LTR MaLR 0 378 1 4 663 438 290 78 56 chr17 10342153 10342166 -84930485 - RMER30 DNA MER1_type -173 29 20 4 663 232 317 50 0 chr17 10342224 10342325 -84930326 - MER102b DNA MER1_type -233 108 3 4 663 792 0 0 0 chr17 10343299 10343387 -84929264 + (CAGGG)n Simple_repeat Simple_repeat 2 89 0 4 663 512 256 45 31 chr17 10343559 10343847 -84928804 + LTRIS5 LTR ERV1 235 519 0 4 663 183 42 0 0 chr17 10344128 10344152 -84928499 + (G)n Simple_repeat Simple_repeat 1 24 0 5 663 540 68 0 0 chr17 10344741 10344814 -84927837 + (CA)n Simple_repeat Simple_repeat 2 74 0 5 663 247 304 97 11 chr17 10345014 10345107 -84927544 - MER20 DNA MER1_type -78 141 41 5 663 542 254 122 17 chr17 10345452 10345624 -84927027 + B3A SINE B2 9 198 0 5 663 340 319 0 0 chr17 10346371 10346462 -84926189 + RMER30 DNA MER1_type 2 92 -110 5 663 416 253 0 92 chr17 10346792 10346901 -84925750 + RMER30 DNA MER1_type 103 201 -1 5 663 324 305 7 84 chr17 10348090 10348232 -84924419 + MLT1A1 LTR MaLR 6 136 -229 5 663 991 139 6 0 chr17 10348232 10348390 -84924261 - URR1A DNA MER1_type 0 226 68 5 663 554 228 45 18 chr17 10348464 10348611 -84924040 + MLT1A1 LTR MaLR 219 408 0 5 663 476 326 83 30 chr17 10348766 10349025 -84923626 + MLT1E1 LTR MaLR 324 597 -57 5 663 3477 86 95 25 chr17 10349025 10349552 -84923099 - LTRIS2 LTR ERV1 0 564 1 5 663 476 326 79 26 chr17 10349552 10349605 -84923046 + MLT1E1 LTR MaLR 598 653 -1 5 663 1830 130 7 14 chr17 10350157 10350441 -84922210 + ORR1A2 LTR MaLR 1 288 -41 5 663 252 0 0 0 chr17 10350449 10350477 -84922174 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 5 663 1572 188 9 43 chr17 10350477 10350507 -84922144 + ORR1A2 LTR MaLR 289 312 -17 5 663 969 70 0 0 chr17 10350507 10350596 -84922055 - B1_Mus2 SINE Alu -9 138 20 5 663 422 40 0 0 chr17 10350586 10350636 -84922015 + ORR1A2 LTR MaLR 268 317 -9 5 663 340 328 67 55 chr17 10351160 10351417 -84921234 - MLT1H LTR MaLR -206 389 108 5 663 211 200 35 35 chr17 10351557 10351614 -84921037 + CT-rich Low_complexity Low_complexity 5 61 0 5 663 441 0 0 0 chr17 10351625 10351674 -84920977 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 663 890 225 40 0 chr17 10351978 10352151 -84920500 - B3A SINE B2 -18 180 1 5 663 214 265 0 0 chr17 10354306 10354355 -84918296 - B1F SINE Alu -29 120 72 5 664 2298 105 13 3 chr17 10354995 10355311 -84917340 + ORR1A2 LTR MaLR 1 319 -8 5 664 186 103 0 0 chr17 10355648 10355677 -84916974 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 5 664 450 0 0 0 chr17 10356325 10356375 -84916276 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 664 315 0 0 0 chr17 10356375 10356409 -84916242 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 664 1084 184 37 5 chr17 10357105 10357323 -84915328 - URR1B DNA MER1_type 0 225 1 5 664 806 318 66 54 chr17 10357842 10358251 -84914400 + MLT1F2 LTR MaLR 67 480 -80 5 664 331 255 93 63 chr17 10358373 10358578 -84914073 + Lx7 LINE L1 7478 7688 -8 5 664 1031 281 83 54 chr17 10359780 10360262 -84912389 + MT2A LTR ERVL 3 498 -35 5 664 636 239 0 22 chr17 10360575 10360712 -84911939 - URR1A DNA MER1_type -16 210 77 5 664 387 228 82 68 chr17 10361745 10361891 -84910760 - MLT1D LTR MaLR -4 501 354 5 664 245 29 29 0 chr17 10362092 10362126 -84910525 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 664 29 0 0 0 chr17 10363737 10363766 -84908885 + AT_rich Low_complexity Low_complexity 1 29 0 5 664 21 0 0 0 chr17 10364106 10364127 -84908524 + AT_rich Low_complexity Low_complexity 1 21 0 5 664 25 65 0 0 chr17 10364453 10364499 -84908152 + AT_rich Low_complexity Low_complexity 1 46 0 5 664 192 77 0 0 chr17 10365046 10365072 -84907579 + (CCCCCT)n Simple_repeat Simple_repeat 1 26 0 5 664 241 241 7 41 chr17 10365112 10365259 -84907392 + CT-rich Low_complexity Low_complexity 3 144 0 5 664 654 184 34 41 chr17 10365259 10365406 -84907245 - B1_Mur4 SINE Alu 0 150 5 5 664 411 239 106 0 chr17 10365413 10365526 -84907125 - L1MA9 LINE L1 -485 5827 5703 5 664 359 318 110 88 chr17 10365745 10366121 -84906530 + MER90 LTR ERV1 17 400 -175 5 664 437 267 109 51 chr17 10366430 10366706 -84905945 + B4A SINE B4 1 292 0 5 664 258 32 0 0 chr17 10366938 10366969 -84905682 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 5 664 1370 126 82 31 chr17 10367131 10367386 -84905265 - Lx LINE L1 0 6654 6387 5 664 2129 57 0 0 chr17 10367386 10367648 -84905003 + L1_Mus3 LINE L1 5621 5882 -756 5 664 679 241 28 0 chr17 10367902 10368047 -84904604 + B3A SINE B2 1 149 -49 5 664 809 97 8 0 chr17 10368057 10368191 -84904460 + (TC)n Simple_repeat Simple_repeat 1 135 0 5 664 655 272 88 69 chr17 10368603 10368864 -84903787 + B4A SINE B4 27 292 0 5 664 202 288 17 17 chr17 10368866 10368986 -84903665 + (CATATA)n Simple_repeat Simple_repeat 3 122 0 5 664 375 23 0 0 chr17 10369197 10369241 -84903410 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 664 397 341 132 35 chr17 10371347 10371687 -84900964 - MLT1C LTR MaLR -79 388 16 5 664 291 311 82 64 chr17 10372467 10372797 -84899854 + L1MC4 LINE L1 7693 8028 -14 5 664 2456 89 6 12 chr17 10373654 10373983 -84898668 - ORR1A2 LTR MaLR 0 327 1 5 664 287 352 0 11 chr17 10374442 10374531 -84898120 + Charlie24 DNA MER1_type 2363 2450 0 5 664 726 269 28 118 chr17 10375934 10376255 -84896396 + B4A SINE B4 1 292 0 5 664 522 237 0 0 chr17 10376255 10376481 -84896170 + (CA)n Simple_repeat Simple_repeat 1 226 0 5 664 678 58 0 0 chr17 10377846 10377933 -84894718 + (TTTTC)n Simple_repeat Simple_repeat 4 90 0 5 664 1505 188 42 13 chr17 10377934 10378247 -84894404 - Lx LINE L1 -16 6638 6317 5 664 1892 176 69 6 chr17 10378434 10378795 -84893856 + ORR1C2 LTR MaLR 1 384 0 5 664 465 19 0 0 chr17 10379518 10379572 -84893079 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 664 819 243 9 74 chr17 10380967 10381198 -84891453 + B3 SINE B2 1 216 0 5 664 581 0 14 0 chr17 10382626 10382695 -84889956 + (TC)n Simple_repeat Simple_repeat 1 70 0 5 664 1082 239 215 31 chr17 10383823 10384114 -84888537 + MTD LTR MaLR 1 361 -58 5 664 1449 182 146 18 chr17 10384114 10384444 -84888207 + ORR1D1 LTR MaLR 1 372 -2 5 664 1082 239 215 31 chr17 10384444 10384506 -84888145 + MTD LTR MaLR 362 419 0 5 664 261 0 0 0 chr17 10384521 10384550 -84888101 + (CAA)n Simple_repeat Simple_repeat 2 30 0 5 664 615 284 25 78 chr17 10384963 10385207 -84887444 + ORR1E LTR MaLR 1 240 -130 5 664 28 0 0 0 chr17 10386708 10386736 -84885915 + AT_rich Low_complexity Low_complexity 1 28 0 5 664 597 254 27 65 chr17 10386930 10386950 -84885701 + B3A SINE B2 3 21 -177 5 664 342 0 0 0 chr17 10386950 10386988 -84885663 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 664 597 254 27 65 chr17 10386988 10387152 -84885499 + B3A SINE B2 22 180 -18 5 664 439 191 63 13 chr17 10387153 10387312 -84885339 + (CA)n Simple_repeat Simple_repeat 2 168 0 5 664 359 250 0 0 chr17 10387448 10387524 -84885127 - ID4_ SINE ID -6 77 2 5 664 378 275 75 15 chr17 10387557 10387690 -84884961 - B1F SINE Alu -8 141 1 5 664 519 60 0 0 chr17 10389005 10389072 -84883579 + (TC)n Simple_repeat Simple_repeat 2 68 0 5 664 952 136 35 23 chr17 10389072 10389245 -84883406 - B2_Mm2 SINE B2 -19 176 2 5 664 591 321 33 0 chr17 10389838 10390022 -84882629 + MLT1D LTR MaLR 21 210 -295 5 664 572 293 32 47 chr17 10390349 10390539 -84882112 - B3A SINE B2 -10 188 2 5 664 594 250 80 37 chr17 10390544 10390731 -84881920 - B3A SINE B2 -2 196 2 5 664 237 353 29 19 chr17 10392289 10392393 -84880258 - MIRb SINE MIR -35 233 129 5 664 723 206 0 0 chr17 10392437 10392602 -84880049 + (TA)n Simple_repeat Simple_repeat 1 165 0 5 664 781 292 90 30 chr17 10392646 10392914 -84879737 - B4A SINE B4 -8 284 1 5 664 264 267 40 0 chr17 10393081 10393156 -84879495 + ID4 SINE ID 2 79 -4 5 664 1150 241 50 34 chr17 10393328 10393650 -84879001 + MTE2b LTR MaLR 21 347 -32 5 664 1317 71 22 0 chr17 10394195 10394377 -84878274 + B2_Mm1t SINE B2 4 189 -4 5 664 410 263 182 0 chr17 10394991 10395128 -84877523 - RSINE1 SINE B4 0 165 4 5 664 285 197 0 0 chr17 10396826 10396897 -84875754 + (TA)n Simple_repeat Simple_repeat 1 71 0 5 664 576 0 0 0 chr17 10397590 10397654 -84874997 + (GA)n Simple_repeat Simple_repeat 2 65 0 5 664 234 0 0 0 chr17 10397654 10397680 -84874971 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 664 221 178 0 22 chr17 10402508 10402554 -84870097 + A-rich Low_complexity Low_complexity 3 47 0 5 664 22 0 0 0 chr17 10403450 10403472 -84869179 + AT_rich Low_complexity Low_complexity 1 22 0 5 664 21 0 0 0 chr17 10403521 10403542 -84869109 + AT_rich Low_complexity Low_complexity 1 21 0 5 664 483 18 0 0 chr17 10404400 10404456 -84868195 + (GA)n Simple_repeat Simple_repeat 1 56 0 5 664 324 140 21 11 chr17 10405267 10405361 -84867290 + A-rich Low_complexity Low_complexity 2 96 0 5 664 372 133 0 0 chr17 10407317 10407377 -84865274 + (TAA)n Simple_repeat Simple_repeat 2 61 0 5 664 186 128 0 0 chr17 10408199 10408238 -84864413 + (T)n Simple_repeat Simple_repeat 1 39 0 5 664 228 250 31 0 chr17 10409380 10409444 -84863207 + GA-rich Low_complexity Low_complexity 5 70 0 5 664 189 0 0 0 chr17 10409643 10409664 -84862987 + (A)n Simple_repeat Simple_repeat 1 21 0 5 664 201 152 0 0 chr17 10409986 10410019 -84862632 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 664 225 300 78 20 chr17 10410873 10410975 -84861676 - MER94 DNA AcHobo 0 134 27 5 664 606 63 0 0 chr17 10411558 10411637 -84861014 + (TAA)n Simple_repeat Simple_repeat 2 80 0 5 664 469 175 33 142 chr17 10411637 10411757 -84860894 - PB1D9 SINE Alu -8 112 6 5 664 25 31 0 0 chr17 10412383 10412415 -84860236 + AT_rich Low_complexity Low_complexity 1 32 0 5 664 657 25 0 0 chr17 10413745 10413824 -84858827 + (TA)n Simple_repeat Simple_repeat 1 79 0 5 664 203 203 16 0 chr17 10413890 10413954 -84858697 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 664 407 293 86 0 chr17 10414412 10414528 -84858123 + RSINE1 SINE B4 2 127 -38 5 664 23 33 0 0 chr17 10414999 10415029 -84857622 + AT_rich Low_complexity Low_complexity 1 30 0 5 664 349 346 23 0 chr17 10416184 10416317 -84856334 + Charlie12 DNA MER1_type 3 138 -2735 6 664 377 227 45 11 chr17 10416185 10416274 -84856377 - RMER30 DNA MER1_type -4 198 107 6 664 189 94 0 0 chr17 10416712 10416744 -84855907 + (TCC)n Simple_repeat Simple_repeat 2 33 0 6 664 234 238 0 0 chr17 10416762 10416804 -84855847 + polypurine Low_complexity Low_complexity 3 44 0 6 664 382 198 126 68 chr17 10416812 10416915 -84855736 - PB1D9 SINE Alu 0 120 12 6 664 546 287 0 0 chr17 10417299 10417421 -84855230 + RSINE1 SINE B4 3 124 -41 6 664 26 30 0 0 chr17 10418905 10418938 -84853713 + AT_rich Low_complexity Low_complexity 1 33 0 6 664 1049 83 7 7 chr17 10419478 10419624 -84853027 + B1_Mus2 SINE Alu 2 147 0 6 664 306 0 0 0 chr17 10419775 10419809 -84852842 + (GGGGA)n Simple_repeat Simple_repeat 3 36 0 6 664 21 0 0 0 chr17 10420628 10420649 -84852002 + AT_rich Low_complexity Low_complexity 1 21 0 6 664 252 22 67 0 chr17 10421264 10421309 -84851342 + (TC)n Simple_repeat Simple_repeat 2 49 0 6 664 27 0 0 0 chr17 10421631 10421658 -84850993 + AT_rich Low_complexity Low_complexity 1 27 0 6 664 1183 61 0 7 chr17 10422058 10422206 -84850445 + B1_Mus1 SINE Alu 1 147 -1 6 664 325 240 329 9 chr17 10423469 10423679 -84848972 + L1M5 LINE L1 3100 3376 -2770 6 664 249 57 0 0 chr17 10423986 10424021 -84848630 + (A)n Simple_repeat Simple_repeat 1 35 0 6 664 709 229 302 6 chr17 10424098 10424419 -84848232 - MTD LTR MaLR -3 416 1 6 664 282 29 0 0 chr17 10425561 10425596 -84847055 + (TC)n Simple_repeat Simple_repeat 2 36 0 6 664 219 69 0 0 chr17 10425596 10425624 -84847027 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 664 607 84 266 18 chr17 10425624 10425733 -84846918 - B1_Mus1 SINE Alu -8 140 5 6 664 214 358 71 76 chr17 10426052 10426276 -84846375 + B4 SINE B4 1 223 -69 6 664 411 156 168 35 chr17 10426165 10426278 -84846373 + B1_Mur4 SINE Alu 23 150 0 6 664 343 362 70 73 chr17 10426308 10426594 -84846057 + B4 SINE B4 2 286 -6 6 664 183 80 0 0 chr17 10426657 10426682 -84845969 + (CATA)n Simple_repeat Simple_repeat 2 26 0 6 664 197 186 28 28 chr17 10427099 10427113 -84845538 + A-rich Low_complexity Low_complexity 3 17 0 6 664 239 0 32 0 chr17 10427113 10427144 -84845507 + (GGGGA)n Simple_repeat Simple_repeat 2 33 0 6 664 197 186 28 28 chr17 10427144 10427201 -84845450 + A-rich Low_complexity Low_complexity 18 74 0 6 664 845 147 24 0 chr17 10427206 10427376 -84845275 + GA-rich Low_complexity Low_complexity 4 177 0 6 664 205 366 40 56 chr17 10427803 10428052 -84844599 + L2a LINE L2 2590 2834 -585 6 664 239 348 140 38 chr17 10428116 10428352 -84844299 + L2a LINE L2 2964 3223 -203 6 664 654 255 126 15 chr17 10428627 10428890 -84843761 + L1MA5 LINE L1 5898 6189 -111 6 664 3671 213 81 21 chr17 10428895 10429781 -84842870 + Lx7 LINE L1 6064 7002 -694 6 664 343 253 98 11 chr17 10429782 10429874 -84842777 - RSINE1 SINE B4 -21 144 45 6 664 1002 71 50 0 chr17 10430417 10430557 -84842094 + B1_Mus1 SINE Alu 2 148 0 6 664 198 150 0 0 chr17 10430558 10430598 -84842053 + (A)n Simple_repeat Simple_repeat 1 40 0 6 664 552 254 21 35 chr17 10431258 10431401 -84841250 - B1_Mur1 SINE Alu -7 142 2 6 664 309 109 0 0 chr17 10431905 10431951 -84840700 + (A)n Simple_repeat Simple_repeat 1 46 0 6 664 180 226 79 16 chr17 10432131 10432194 -84840457 - L2c LINE L2 -8 3379 3313 6 664 631 260 76 65 chr17 10432586 10432849 -84839802 + Lx8 LINE L1 7208 7473 0 6 664 309 353 90 32 chr17 10432919 10433074 -84839577 + L1MEc LINE L1 25 188 -6212 6 664 297 337 19 29 chr17 10433333 10433541 -84839110 + L1MEc LINE L1 632 837 -5563 6 664 490 317 100 5 chr17 10433544 10433744 -84838907 + B4A SINE B4 2 220 -72 6 664 285 98 0 0 chr17 10433750 10433791 -84838860 + (CATA)n Simple_repeat Simple_repeat 1 41 0 6 664 687 242 106 40 chr17 10433791 10433989 -84838662 + B3 SINE B2 6 216 0 6 664 359 56 19 0 chr17 10434042 10434096 -84838555 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 664 451 300 31 62 chr17 10434379 10434539 -84838112 - RSINE1 SINE B4 0 165 11 6 664 323 304 53 92 chr17 10434863 10435015 -84837636 + LTR40a LTR ERVL 349 494 -25 6 664 2484 133 19 79 chr17 10435159 10435626 -84837025 + RLTR20A LTR ERVK 103 541 0 6 664 326 323 138 18 chr17 10436218 10436265 -84836386 - L1MD LINE L1 -1936 4210 4158 6 664 614 288 31 16 chr17 10436265 10436459 -84836192 - B3A SINE B2 0 198 2 6 664 326 323 138 18 chr17 10436459 10436635 -84836016 - L1MD LINE L1 -1989 4157 3961 6 664 370 330 0 0 chr17 10436895 10436995 -84835656 + ID_B1 SINE B4 74 173 -51 6 664 438 258 32 0 chr17 10436916 10437009 -84835642 + PB1D10 SINE Alu 14 109 -8 6 664 400 315 131 24 chr17 10437020 10437242 -84835409 - L1MEf LINE L1 -2790 3356 3113 6 664 1074 80 0 0 chr17 10437242 10437379 -84835272 - B1_Mus1 SINE Alu -11 137 1 6 664 400 315 131 24 chr17 10437379 10437621 -84835030 - L1MEf LINE L1 -3034 3112 2842 6 664 481 290 25 76 chr17 10438232 10438430 -84834221 - B3A SINE B2 -10 188 1 6 664 3247 53 2 0 chr17 10438485 10438880 -84833771 + MTA_Mm LTR MaLR 1 396 0 6 664 8527 53 14 7 chr17 10438880 10439971 -84832680 + MTA_Mm-int LTR MaLR 1 1098 0 6 664 3151 49 18 0 chr17 10439971 10440360 -84832291 + MTA_Mm LTR MaLR 1 396 0 6 664 228 336 0 0 chr17 10441031 10441135 -84831516 - L1MEf LINE L1 -4961 1281 1178 6 664 1766 189 52 22 chr17 10441807 10442175 -84830476 + RMER1B Other Other 653 1031 -35 6 664 381 342 31 93 chr17 10442275 10442436 -84830215 + RSINE1 SINE B4 15 165 0 6 664 21 0 0 0 chr17 10442467 10442488 -84830163 + AT_rich Low_complexity Low_complexity 1 21 0 6 664 1092 88 0 0 chr17 10442802 10442949 -84829702 + B1_Mm SINE Alu 1 147 0 6 664 197 132 26 0 chr17 10442949 10442987 -84829664 + GA-rich Low_complexity Low_complexity 1 39 0 6 664 471 214 16 64 chr17 10443245 10443370 -84829281 - PB1D9 SINE Alu 0 120 2 6 664 315 282 0 0 chr17 10444808 10444879 -84827772 + B1F SINE Alu 70 140 -9 6 664 34 0 0 0 chr17 10445121 10445155 -84827496 + AT_rich Low_complexity Low_complexity 1 34 0 6 664 774 327 49 45 chr17 10445496 10445784 -84826867 - B4 SINE B4 -1 291 3 6 664 235 224 16 49 chr17 10445922 10445983 -84826668 - ID4 SINE ID -24 59 1 6 664 261 118 0 0 chr17 10445987 10446038 -84826613 + (A)n Simple_repeat Simple_repeat 1 51 0 6 664 378 0 0 0 chr17 10446464 10446506 -84826145 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 664 1028 11 0 100 chr17 10447522 10447722 -84824929 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 6 664 24 32 0 0 chr17 10448037 10448068 -84824583 + AT_rich Low_complexity Low_complexity 1 31 0 6 664 180 0 0 0 chr17 10448511 10448531 -84824120 + (CA)n Simple_repeat Simple_repeat 2 21 0 6 664 279 173 0 0 chr17 10448534 10448586 -84824065 + (TATATG)n Simple_repeat Simple_repeat 5 56 0 6 664 1220 48 0 0 chr17 10448930 10449076 -84823575 + B1_Mus1 SINE Alu 1 146 -2 6 664 198 0 0 0 chr17 10449204 10449226 -84823425 + (A)n Simple_repeat Simple_repeat 1 22 0 6 664 342 0 0 0 chr17 10449732 10449770 -84822881 + (GA)n Simple_repeat Simple_repeat 1 38 0 6 664 475 291 71 137 chr17 10449860 10450071 -84822580 - B3A SINE B2 -1 197 1 6 664 227 133 0 22 chr17 10450072 10450118 -84822533 + (CAGA)n Simple_repeat Simple_repeat 2 46 0 6 664 684 319 98 33 chr17 10451173 10451510 -84821141 + ORR1E LTR MaLR 1 359 0 6 664 2109 150 104 8 chr17 10451600 10451984 -84820667 - MTC LTR MaLR 0 421 1 6 664 394 237 44 44 chr17 10452493 10452630 -84820021 - L1MD LINE L1 -541 5818 5682 6 664 330 224 47 0 chr17 10452664 10452749 -84819902 + L1MA5 LINE L1 6207 6295 -5 6 664 18234 84 10 5 chr17 10453238 10454097 -84818554 + L1_Mus2 LINE L1 3335 4195 -1688 6 664 351 0 0 0 chr17 10454097 10454136 -84818515 + (CATA)n Simple_repeat Simple_repeat 2 40 0 6 664 18234 76 20 5 chr17 10454136 10456467 -84816184 + L1_Mus2 LINE L1 4196 6565 -1 6 664 212 231 39 0 chr17 10456795 10456847 -84815804 + PB1D9 SINE Alu 41 94 -26 6 664 333 0 0 0 chr17 10456855 10456892 -84815759 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 664 409 253 10 10 chr17 10456915 10457011 -84815640 + Lx8 LINE L1 7249 7344 -129 6 664 910 82 64 43 chr17 10457026 10457167 -84815484 + B1_Mus1 SINE Alu 5 148 0 6 664 788 257 38 11 chr17 10457189 10457374 -84815277 + B3 SINE B2 27 216 0 6 664 229 278 97 58 chr17 10457600 10457703 -84814948 + MER105 DNA DNA 1 107 -97 6 664 255 61 0 0 chr17 10457753 10457786 -84814865 + (TA)n Simple_repeat Simple_repeat 1 33 0 6 664 217 286 16 0 chr17 10458173 10458236 -84814415 + RSINE1 SINE B4 11 74 -91 6 664 790 152 8 0 chr17 10459456 10459588 -84813063 - URR1B DNA MER1_type 0 225 93 6 664 412 254 60 27 chr17 10459588 10459603 -84813048 + CYRA11_Mm Unknown Y-chromosome 171 322 -295 6 664 290 303 17 28 chr17 10459717 10459836 -84812815 - PB1D7 SINE Alu -2 118 2 6 664 189 0 0 0 chr17 10460448 10460469 -84812182 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 6 664 361 278 204 0 chr17 10460791 10460899 -84811752 - RSINE1 SINE B4 0 165 36 6 664 223 140 0 66 chr17 10461824 10461885 -84810766 + G-rich Low_complexity Low_complexity 3 59 0 6 664 625 286 175 56 chr17 10461887 10462172 -84810479 + MER21B LTR ERV1 220 538 -325 6 664 226 316 174 0 chr17 10462563 10462661 -84809990 + MIRb SINE MIR 49 163 -105 6 664 531 297 34 119 chr17 10463570 10463838 -84808813 + B4A SINE B4 2 246 -46 6 664 209 163 42 32 chr17 10463969 10464064 -84808587 + (TA)n Simple_repeat Simple_repeat 1 96 0 6 664 3358 38 2 0 chr17 10464822 10465217 -84807434 - MTA_Mm LTR MaLR 0 396 1 6 664 24 53 0 0 chr17 10465496 10465534 -84807117 + AT_rich Low_complexity Low_complexity 1 38 0 6 664 249 241 0 33 chr17 10465787 10465847 -84806804 + (TAG)n Simple_repeat Simple_repeat 1 58 0 7 664 650 227 169 37 chr17 10466461 10466753 -84805898 + MTC LTR MaLR 1 327 -69 7 664 3443 52 2 9 chr17 10467898 10468341 -84804310 - L1_Mus1 LINE L1 0 6567 6128 7 664 459 52 0 0 chr17 10468561 10468619 -84804032 + (TG)n Simple_repeat Simple_repeat 1 58 0 7 664 406 286 250 0 chr17 10468629 10468839 -84803812 - B4A SINE B4 -6 286 24 7 664 296 272 0 64 chr17 10469350 10469460 -84803191 - Lx9 LINE L1 -225 7419 7317 7 664 549 328 124 23 chr17 10470183 10470448 -84802203 - B4 SINE B4 0 292 1 7 664 829 129 159 0 chr17 10471389 10471552 -84801099 + B2_Mm1t SINE B2 1 189 -4 7 664 467 295 0 69 chr17 10471695 10471855 -84800796 + B3A SINE B2 50 198 0 7 664 311 246 0 0 chr17 10471934 10471995 -84800656 - ID4_ SINE ID -2 81 21 7 664 284 295 0 49 chr17 10471995 10472007 -84800644 - ID SINE ID -137 58 10 7 664 387 0 0 0 chr17 10472108 10472151 -84800500 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 664 2824 158 25 29 chr17 10472152 10472713 -84799938 + RLTR31_Mm LTR ERVK 3 561 0 7 664 508 236 21 28 chr17 10473123 10473267 -84799384 - B1_Mus1 SINE Alu -5 143 1 7 664 21 0 0 0 chr17 10473475 10473496 -84799155 + AT_rich Low_complexity Low_complexity 1 21 0 7 664 242 233 201 20 chr17 10474480 10474629 -84798022 + L1M3 LINE L1 3483 3658 -2482 7 664 1032 189 10 73 chr17 10474629 10474835 -84797816 - URR1A DNA MER1_type -33 193 1 7 664 213 417 28 74 chr17 10475010 10475186 -84797465 - L2 LINE L2 -351 3068 2901 7 664 32 26 0 0 chr17 10477223 10477262 -84795389 + AT_rich Low_complexity Low_complexity 1 39 0 7 664 1047 113 7 0 chr17 10477432 10477583 -84795068 + URR1A DNA MER1_type 70 221 -5 7 664 596 304 20 25 chr17 10477586 10477785 -84794866 + B3 SINE B2 4 201 -15 7 664 484 293 61 2 chr17 10477802 10477988 -84794663 + B3A SINE B2 15 216 0 7 664 247 313 30 0 chr17 10478257 10478324 -84794327 + ID4_ SINE ID 2 70 -13 7 664 544 300 192 43 chr17 10478402 10478435 -84794216 - Lx8 LINE L1 -11 7462 7422 7 664 360 0 0 0 chr17 10478435 10478475 -84794176 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 664 544 300 192 43 chr17 10478475 10478971 -84793680 - Lx8 LINE L1 -52 7421 6854 7 664 206 319 14 27 chr17 10479309 10479383 -84793268 + L2a LINE L2 3351 3423 -3 7 664 342 274 83 28 chr17 10480154 10480263 -84792388 - PB1D7 SINE Alu -5 115 1 7 664 449 50 36 48 chr17 10480810 10480894 -84791757 + L1Md_F3 LINE L1 6500 6582 -2 7 664 27 0 0 0 chr17 10480894 10480921 -84791730 + AT_rich Low_complexity Low_complexity 1 27 0 7 664 198 0 0 0 chr17 10482096 10482118 -84790533 + (A)n Simple_repeat Simple_repeat 1 22 0 7 664 1628 262 121 16 chr17 10482264 10483051 -84789600 + L1M2 LINE L1 4531 5399 -744 7 664 225 237 0 0 chr17 10483053 10483091 -84789560 + RLTR14 LTR ERV1 252 289 -93 7 664 638 290 62 92 chr17 10483104 10483306 -84789345 + L1M2 LINE L1 5462 5664 -636 7 664 726 247 41 35 chr17 10483306 10483503 -84789148 + B3A SINE B2 1 198 0 7 664 638 293 60 82 chr17 10483503 10483693 -84788958 + L1M2 LINE L1 5665 5848 -496 7 664 833 210 118 5 chr17 10483906 10484093 -84788558 + B3 SINE B2 2 209 -7 7 664 397 208 34 62 chr17 10484640 10484777 -84787874 - PB1D9 SINE Alu -3 147 24 7 664 420 259 86 0 chr17 10484875 10484991 -84787660 - RSINE1 SINE B4 -29 136 11 7 664 271 200 11 111 chr17 10485327 10485417 -84787234 + L1MC4a LINE L1 7421 7501 -381 7 664 278 148 36 24 chr17 10485487 10485570 -84787081 + GA-rich Low_complexity Low_complexity 4 87 0 7 664 394 115 37 21 chr17 10485591 10485695 -84786956 + B1_Mus2 SINE Alu 42 149 0 7 665 1155 76 0 0 chr17 10485782 10485927 -84786724 - B1_Mus1 SINE Alu -2 146 2 7 665 189 0 0 0 chr17 10487395 10487416 -84785235 + (A)n Simple_repeat Simple_repeat 1 21 0 7 665 275 320 96 8 chr17 10488089 10488251 -84784400 - MIR SINE MIR -91 171 2 7 665 1200 54 0 0 chr17 10488720 10488867 -84783784 + B1_Mm SINE Alu 1 147 0 7 665 763 212 141 21 chr17 10489317 10489509 -84783142 + B3 SINE B2 9 216 0 7 665 279 0 0 0 chr17 10489509 10489540 -84783111 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 665 487 269 5 129 chr17 10489540 10489556 -84783095 + B2_Mm2 SINE B2 177 191 -4 7 665 578 268 16 0 chr17 10489931 10490054 -84782597 - B1_Mur1 SINE Alu -17 132 8 7 665 2237 120 122 10 chr17 10490939 10491342 -84781309 - Lx2 LINE L1 -6 6991 6544 7 665 291 50 0 0 chr17 10491354 10491394 -84781257 - Lx2 LINE L1 -577 6420 6381 7 665 305 83 0 20 chr17 10491926 10491975 -84780676 + B1_Mur4 SINE Alu 99 146 -4 7 665 239 259 0 0 chr17 10491976 10492030 -84780621 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 7 665 668 138 53 61 chr17 10492907 10493038 -84779613 - RLTR20B3 LTR ERVK -447 130 1 7 665 211 294 30 80 chr17 10494175 10494275 -84778376 - BC1_Mm scRNA scRNA -47 105 11 7 665 403 77 371 19 chr17 10495170 10495275 -84777376 - B2_Mm2 SINE B2 -7 188 47 7 665 1202 101 12 0 chr17 10495310 10495479 -84777172 - B2_Mm1t SINE B2 -22 171 1 7 665 248 276 162 10 chr17 10495584 10495683 -84776968 + PB1D10 SINE Alu 6 119 -1 7 665 188 67 0 32 chr17 10495686 10495717 -84776934 + (GGA)n Simple_repeat Simple_repeat 1 30 0 7 665 263 310 0 0 chr17 10496144 10496202 -84776449 - ID4_ SINE ID -8 75 18 7 665 956 168 107 0 chr17 10496651 10496847 -84775804 + URR1A DNA MER1_type 5 221 -5 7 665 297 51 0 0 chr17 10496888 10496927 -84775724 + (TG)n Simple_repeat Simple_repeat 1 39 0 7 665 235 306 0 61 chr17 10497008 10497074 -84775577 - ID4_ SINE ID 0 83 22 7 665 390 94 0 0 chr17 10497832 10497896 -84774755 + (CA)n Simple_repeat Simple_repeat 1 64 0 7 665 189 0 0 0 chr17 10498042 10498063 -84774588 + (TG)n Simple_repeat Simple_repeat 2 22 0 7 665 356 197 0 14 chr17 10498367 10498439 -84774212 - B1_Mur4 SINE Alu -2 148 78 7 665 383 138 14 58 chr17 10498475 10498544 -84774107 - B1F2 SINE Alu -72 77 12 7 665 246 250 13 105 chr17 10498487 10498563 -84774088 - B4A SINE B4 -142 150 82 7 665 333 131 0 0 chr17 10499719 10499780 -84772871 + (CA)n Simple_repeat Simple_repeat 1 61 0 7 665 920 201 101 0 chr17 10500102 10500291 -84772360 + B3 SINE B2 1 208 -8 1 665 1464 33 33 16 chr17 10500312 10500496 -84772155 + B2_Mm2 SINE B2 1 187 -8 2 665 305 329 122 7 chr17 10500619 10500766 -84771885 + L1MC3 LINE L1 6686 6849 -936 3 665 253 331 47 40 chr17 10501328 10501476 -84771175 + B1F1 SINE Alu 1 149 0 4 665 24 32 0 0 chr17 10501483 10501514 -84771137 + AT_rich Low_complexity Low_complexity 1 31 0 5 665 1143 75 0 13 chr17 10501544 10501693 -84770958 + B1_Mus2 SINE Alu 1 147 0 6 665 225 0 0 0 chr17 10501814 10501839 -84770812 + (T)n Simple_repeat Simple_repeat 1 25 0 7 665 31 26 0 0 chr17 10501841 10501879 -84770772 + AT_rich Low_complexity Low_complexity 1 38 0 8 665 21 82 0 0 chr17 10502498 10502547 -84770104 + AT_rich Low_complexity Low_complexity 1 49 0 9 665 500 215 10 23 chr17 10502940 10503052 -84769599 + PB1D9 SINE Alu 2 108 -12 1 665 261 0 0 0 chr17 10503075 10503104 -84769547 + (A)n Simple_repeat Simple_repeat 1 29 0 1 665 400 245 50 0 chr17 10503665 10503758 -84768893 - B1_Mur1 SINE Alu -1 148 52 1 665 316 192 12 60 chr17 10503704 10503787 -84768864 - RLTR25B LTR ERVK -526 502 424 1 665 287 283 0 0 chr17 10504121 10504174 -84768477 + ID2 SINE ID 20 72 -11 1 665 1043 168 40 15 chr17 10504354 10504553 -84768098 + URR1A DNA MER1_type 1 204 -22 1 665 1069 172 14 63 chr17 10505425 10505648 -84767003 - B3 SINE B2 -4 212 1 1 665 45 83 0 0 chr17 10511406 10511514 -84761137 + GC_rich Low_complexity Low_complexity 1 108 0 1 665 180 0 0 0 chr17 10511520 10511540 -84761111 + (CCCG)n Simple_repeat Simple_repeat 3 22 0 1 665 31 44 0 0 chr17 10511547 10511592 -84761059 + GC_rich Low_complexity Low_complexity 1 45 0 1 665 58 106 0 11 chr17 10511760 10512047 -84760604 + GC_rich Low_complexity Low_complexity 1 284 0 2 665 61 106 0 10 chr17 10511796 10512093 -84760558 + GC_rich Low_complexity Low_complexity 1 294 0 2 665 198 0 0 0 chr17 10512137 10512159 -84760492 + (CCG)n Simple_repeat Simple_repeat 3 24 0 2 665 55 83 0 0 chr17 10512237 10512369 -84760282 + GC_rich Low_complexity Low_complexity 1 132 0 2 665 28 0 0 0 chr17 10512560 10512588 -84760063 + AT_rich Low_complexity Low_complexity 1 28 0 2 665 21 0 0 0 chr17 10513978 10513999 -84758652 + AT_rich Low_complexity Low_complexity 1 21 0 2 665 197 361 62 52 chr17 10514069 10514262 -84758389 - MIR SINE MIR -38 224 30 2 665 360 0 0 0 chr17 10515859 10515899 -84756752 + (TAG)n Simple_repeat Simple_repeat 2 41 0 2 665 944 33 8 0 chr17 10516799 10516919 -84755732 + (TC)n Simple_repeat Simple_repeat 1 121 0 2 665 1209 216 48 6 chr17 10516919 10517232 -84755419 + BGLII_B LTR ERVK 116 441 0 2 665 427 204 102 0 chr17 10518343 10518431 -84754220 - B3 SINE B2 -119 97 1 3 665 302 153 361 0 chr17 10518531 10518603 -84754048 - B1F SINE Alu -1 148 51 3 665 3962 164 97 70 chr17 10520305 10521184 -84751467 + RMER19B LTR ERVK 1 902 0 3 665 286 284 124 11 chr17 10521272 10521361 -84751290 + PB1D7 SINE Alu 3 101 -19 3 665 246 286 79 0 chr17 10521401 10521464 -84751187 + ID4 SINE ID 5 72 -11 3 665 248 278 138 9 chr17 10522822 10522938 -84749713 + B1_Mm SINE Alu 1 131 -16 3 665 225 0 0 0 chr17 10523737 10523762 -84748889 + (C)n Simple_repeat Simple_repeat 1 25 0 3 665 545 230 20 0 chr17 10523850 10523950 -84748701 + ORR1D2 LTR MaLR 1 102 -268 3 665 1185 68 0 0 chr17 10523950 10524096 -84748555 + B1_Mus2 SINE Alu 2 147 0 3 665 807 208 196 64 chr17 10524124 10524398 -84748253 + ORR1D2 LTR MaLR 57 370 -14 3 665 633 223 54 0 chr17 10524649 10524797 -84747854 + ID_B1 SINE B4 67 222 -2 3 665 834 164 14 7 chr17 10524997 10525144 -84747507 - B1_Mur2 SINE Alu 0 149 2 4 665 216 0 0 0 chr17 10525462 10525486 -84747165 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 4 665 231 0 24 49 chr17 10525491 10525532 -84747119 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 4 665 1142 96 0 0 chr17 10525533 10525679 -84746972 - B1_Mus1 SINE Alu -1 147 2 4 665 222 291 47 0 chr17 10525865 10525951 -84746700 + MIR SINE MIR 58 147 -115 4 665 443 307 120 21 chr17 10526109 10526336 -84746315 + MLT1J1 LTR MaLR 1 240 -208 4 665 225 340 209 20 chr17 10526656 10526962 -84745689 + MLT1J1 LTR MaLR 197 560 -35 4 665 274 269 26 16 chr17 10529745 10529854 -84742797 - B1F2 SINE Alu -5 115 10 4 665 236 280 25 51 chr17 10529786 10529865 -84742786 - ID_B1 SINE B4 -67 157 81 4 665 203 138 0 0 chr17 10531615 10531644 -84741007 + (CTTG)n Simple_repeat Simple_repeat 3 31 0 4 665 425 281 16 24 chr17 10531644 10531768 -84740883 - ID_B1 SINE B4 0 224 102 4 665 940 34 0 8 chr17 10531823 10531942 -84740709 - B1_Mm SINE Alu -29 118 1 5 665 316 250 69 19 chr17 10531942 10531993 -84740658 - ORR1B1-int LTR MaLR -863 646 588 5 665 251 372 75 14 chr17 10533132 10533279 -84739372 + MIRc SINE MIR 54 209 -59 5 665 189 0 0 0 chr17 10533473 10533494 -84739157 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 5 665 604 180 12 0 chr17 10533544 10533705 -84738946 + (TA)n Simple_repeat Simple_repeat 2 164 0 5 665 368 309 118 0 chr17 10533774 10533884 -84738767 + RSINE1 SINE B4 13 135 -30 5 665 560 162 152 0 chr17 10534720 10534825 -84737826 + B1_Mur3 SINE Alu 23 143 -6 5 665 384 22 0 0 chr17 10536323 10536368 -84736283 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 665 423 0 0 0 chr17 10536368 10536414 -84736237 + (GA)n Simple_repeat Simple_repeat 2 48 0 5 665 1131 71 14 0 chr17 10536933 10537074 -84735577 + B1_Mus2 SINE Alu 2 144 -3 5 665 262 0 53 0 chr17 10537074 10537112 -84735539 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 6 665 822 76 0 0 chr17 10537292 10537411 -84735240 + (TC)n Simple_repeat Simple_repeat 2 120 0 6 665 490 87 21 21 chr17 10537430 10537524 -84735127 + (TCTCTG)n Simple_repeat Simple_repeat 5 98 0 6 665 183 156 0 0 chr17 10537541 10537573 -84735078 + C-rich Low_complexity Low_complexity 3 34 0 6 665 203 330 42 52 chr17 10538018 10538067 -84734584 - MIRb SINE MIR -6 262 212 6 665 3583 130 40 40 chr17 10538067 10538668 -84733983 - MT2B LTR ERVL 0 601 1 6 665 203 330 42 52 chr17 10538668 10538714 -84733937 - MIRb SINE MIR -57 211 168 6 665 314 170 105 24 chr17 10539282 10539391 -84733260 - PB1D10 SINE Alu -25 124 1 6 665 607 238 54 70 chr17 10539578 10539763 -84732888 - B3A SINE B2 -16 182 1 6 665 431 349 48 0 chr17 10539766 10539932 -84732719 + MER3 DNA MER1_type 33 206 -3 6 665 478 231 116 0 chr17 10540034 10540155 -84732496 + B1_Mur3 SINE Alu 2 136 -13 6 665 299 164 16 0 chr17 10540180 10540241 -84732410 + GA-rich Low_complexity Low_complexity 1 62 0 7 665 329 323 92 31 chr17 10542592 10542755 -84729896 - MLT1C LTR MaLR -8 459 287 7 665 240 35 0 0 chr17 10543064 10543093 -84729558 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 7 665 654 104 0 0 chr17 10543093 10543188 -84729463 + (TCTA)n Simple_repeat Simple_repeat 1 96 0 7 665 514 283 0 0 chr17 10543203 10543323 -84729328 - B1F SINE Alu -15 134 15 7 665 288 70 0 0 chr17 10544270 10544313 -84728338 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 7 665 715 279 76 69 chr17 10544366 10544676 -84727975 - B4A SINE B4 -20 272 2 7 665 263 333 115 0 chr17 10544676 10544761 -84727890 - Charlie1b DNA MER1_type -25 498 403 7 665 1476 43 38 0 chr17 10545160 10545346 -84727305 + B2_Mm1a SINE B2 1 193 0 7 665 1347 84 11 6 chr17 10545495 10545674 -84726977 + B2_Mm2 SINE B2 2 181 -14 7 665 207 0 0 0 chr17 10545680 10545703 -84726948 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 665 25 75 0 0 chr17 10545774 10545827 -84726824 + AT_rich Low_complexity Low_complexity 1 53 0 8 665 507 110 14 0 chr17 10545834 10545907 -84726744 - B1_Mur4 SINE Alu 0 150 77 8 665 279 268 59 49 chr17 10546839 10546941 -84725710 - MIR SINE MIR -88 120 18 8 665 552 235 9 0 chr17 10547027 10547142 -84725509 + PB1 SINE Alu 1 116 -11 8 665 1022 310 98 2 chr17 10547479 10547887 -84724764 - MER44B DNA MER2_type -96 454 8 8 665 1078 185 62 0 chr17 10548324 10548535 -84724116 + URR1A DNA MER1_type 1 224 -2 8 665 665 273 92 10 chr17 10548561 10548768 -84723883 + B4 SINE B4 2 225 -67 8 665 836 284 40 123 chr17 10549346 10549751 -84722900 + MTE2a LTR MaLR 3 373 -6 8 665 463 182 0 0 chr17 10549926 10550003 -84722648 - B1_Mur1 SINE Alu 0 149 73 8 665 381 127 38 0 chr17 10551185 10551264 -84721387 + GA-rich Low_complexity Low_complexity 1 82 0 9 665 639 39 0 0 chr17 10551355 10551433 -84721218 + (GAGAA)n Simple_repeat Simple_repeat 5 82 0 9 665 327 49 0 0 chr17 10552778 10552819 -84719832 + (T)n Simple_repeat Simple_repeat 1 41 0 9 665 1225 61 0 0 chr17 10552819 10552966 -84719685 - B1_Mm SINE Alu 0 147 1 9 665 988 301 17 24 chr17 10552980 10553022 -84719629 - B4 SINE B4 0 292 257 9 665 402 57 0 0 chr17 10553022 10553075 -84719576 + (TG)n Simple_repeat Simple_repeat 2 54 0 9 665 988 301 17 24 chr17 10553075 10553321 -84719330 - B4 SINE B4 -36 256 6 9 665 284 262 55 27 chr17 10553362 10553472 -84719179 - RSINE1 SINE B4 -5 160 48 9 665 198 0 0 0 chr17 10554359 10554381 -84718270 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 9 665 291 276 0 38 chr17 10555762 10555841 -84716810 - B4A SINE B4 -1 291 216 9 665 208 79 53 0 chr17 10555843 10555881 -84716770 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 9 665 777 238 86 14 chr17 10555881 10556090 -84716561 - B4A SINE B4 -68 224 1 9 665 188 269 19 0 chr17 10556261 10556313 -84716338 - L2b LINE L2 -9 3366 3314 1 665 280 286 0 38 chr17 10557071 10557151 -84715500 - B4A SINE B4 -1 291 215 1 665 206 81 27 0 chr17 10557154 10557191 -84715460 + (TTTTTG)n Simple_repeat Simple_repeat 2 39 0 1 665 488 293 120 36 chr17 10558467 10558720 -84713931 + L1MD3 LINE L1 6652 6937 -1058 1 665 954 0 0 0 chr17 10558720 10558826 -84713825 + (CCCCAG)n Simple_repeat Simple_repeat 1 106 0 1 665 488 306 150 52 chr17 10558826 10559354 -84713297 + L1MD3 LINE L1 6921 7490 -295 1 665 690 226 101 34 chr17 10559556 10559735 -84712916 - ID_B1 SINE B4 -13 211 21 1 665 187 323 77 0 chr17 10560040 10560105 -84712546 + L2 LINE L2 2533 2602 -817 1 665 620 234 23 23 chr17 10560862 10560993 -84711658 - B3 SINE B2 0 216 86 1 665 183 80 0 0 chr17 10561162 10561187 -84711464 + (CCCCCG)n Simple_repeat Simple_repeat 5 29 0 1 665 489 302 23 29 chr17 10561432 10561606 -84711045 - B4A SINE B4 -4 288 116 1 665 298 289 73 69 chr17 10561601 10561758 -84710893 - B4A SINE B4 -126 166 11 1 665 312 70 0 0 chr17 10561834 10561877 -84710774 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 665 257 260 96 39 chr17 10561880 10561984 -84710667 - PB1D7 SINE Alu -6 114 5 1 665 439 292 11 27 chr17 10562293 10562521 -84710130 + (TG)n Simple_repeat Simple_repeat 1 224 0 1 665 295 256 16 60 chr17 10562418 10562601 -84710050 + (TATATG)n Simple_repeat Simple_repeat 5 179 0 1 665 269 89 22 0 chr17 10562605 10562650 -84710001 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 665 262 200 0 0 chr17 10562843 10562883 -84709768 - B4A SINE B4 -221 71 32 1 665 547 261 309 27 chr17 10564017 10564241 -84708410 + B4A SINE B4 5 291 -1 1 665 212 243 13 79 chr17 10564320 10564396 -84708255 - B4A SINE B4 -216 76 6 1 665 314 229 23 46 chr17 10565155 10565242 -84707409 - L1M4b LINE L1 -5073 2261 2177 1 665 501 236 62 28 chr17 10565270 10565414 -84707237 + B1F1 SINE Alu 1 149 0 1 665 261 0 0 0 chr17 10565764 10565793 -84706858 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 665 866 200 32 26 chr17 10565985 10566175 -84706476 + URR1A DNA MER1_type 35 225 -1 1 665 270 283 69 29 chr17 10567675 10567777 -84704874 - MLT1A1 LTR MaLR -4 404 299 1 665 1091 265 153 19 chr17 10567981 10568062 -84704589 + MTD LTR MaLR 12 131 -288 1 665 270 0 0 0 chr17 10568062 10568092 -84704559 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 665 549 44 0 0 chr17 10568092 10568159 -84704492 + (GA)n Simple_repeat Simple_repeat 1 68 0 1 665 1091 256 148 0 chr17 10568159 10568414 -84704237 + MTD LTR MaLR 132 417 -2 1 665 241 271 14 0 chr17 10568418 10568488 -84704163 - MLT1A1 LTR MaLR -238 136 66 1 665 796 248 90 26 chr17 10568946 10569219 -84703432 - MLT1D LTR MaLR -1 504 203 1 665 1616 230 51 41 chr17 10569267 10569680 -84702971 - MTD LTR MaLR 0 419 3 1 665 304 283 46 28 chr17 10569699 10569808 -84702843 - MLT1D LTR MaLR -393 112 2 1 665 342 0 0 0 chr17 10569817 10569855 -84702796 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 665 754 287 109 19 chr17 10569960 10569976 -84702675 - RMER15 LTR ERVL 0 575 561 1 665 2993 100 2 64 chr17 10569976 10570459 -84702192 - RLTR11B LTR ERVK 0 453 1 1 665 754 287 109 19 chr17 10570459 10570708 -84701943 - RMER15 LTR ERVL -15 560 286 1 665 299 261 44 33 chr17 10570879 10570970 -84701681 - B1_Mur3 SINE Alu -49 100 9 1 665 424 201 16 0 chr17 10570892 10570989 -84701662 - ID_B1 SINE B4 -56 168 74 1 665 728 218 115 132 chr17 10572829 10572914 -84699737 + B4 SINE B4 1 83 -209 1 665 225 0 0 0 chr17 10572914 10572939 -84699712 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 1 665 728 218 115 132 chr17 10572939 10573149 -84699502 + B4 SINE B4 84 291 -1 1 665 204 118 0 105 chr17 10573409 10573466 -84699185 + C-rich Low_complexity Low_complexity 4 54 0 1 665 2985 153 10 23 chr17 10575190 10575710 -84696941 + RLTR11A2 LTR ERVK 1 513 -14 1 665 419 305 93 75 chr17 10575933 10576255 -84696396 + MLT1B LTR MaLR 63 390 0 1 665 1985 179 85 8 chr17 10576450 10576839 -84695812 - MTD LTR MaLR 0 419 1 1 665 521 280 30 8 chr17 10576925 10577058 -84695593 + ID_B1 SINE B4 84 219 -5 1 665 546 259 38 0 chr17 10578131 10578262 -84694389 + B3A SINE B2 41 176 -22 1 665 289 237 17 0 chr17 10578320 10578379 -84694272 + PB1D10 SINE Alu 53 112 -5 1 665 37 39 0 0 chr17 10578663 10578714 -84693937 + AT_rich Low_complexity Low_complexity 1 51 0 1 665 592 280 35 7 chr17 10578872 10579016 -84693635 - RSINE1 SINE B4 -6 159 12 1 665 7580 66 4 2 chr17 10579893 10581215 -84691436 - L1_Mus1 LINE L1 0 6567 5244 1 665 1073 126 183 5 chr17 10581260 10581451 -84691200 + URR1A DNA MER1_type 2 226 0 1 665 375 192 0 0 chr17 10582427 10582505 -84690146 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 665 205 241 56 0 chr17 10584055 10584109 -84688542 + CT-rich Low_complexity Low_complexity 1 57 0 1 665 557 296 143 93 chr17 10584202 10584620 -84688031 - MLT1C LTR MaLR -8 459 21 1 665 213 65 0 0 chr17 10584862 10584893 -84687758 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 665 1148 65 0 0 chr17 10584893 10585031 -84687620 - B1_Mus1 SINE Alu -10 138 1 1 665 1477 68 16 5 chr17 10585063 10585255 -84687396 - B2_Mm2 SINE B2 0 195 2 1 665 375 103 17 0 chr17 10585909 10585967 -84686684 - HAL1-3A_ME LINE L1 -824 2034 1976 1 665 255 61 0 0 chr17 10585967 10586000 -84686651 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 665 235 275 41 62 chr17 10586038 10586135 -84686516 - RSINE1 SINE B4 0 165 71 1 665 182 233 0 16 chr17 10586395 10586456 -84686195 + CT-rich Low_complexity Low_complexity 2 61 0 1 665 284 319 46 0 chr17 10586457 10586562 -84686089 - PB1D9 SINE Alu 0 120 11 1 665 450 0 0 0 chr17 10587577 10587627 -84685024 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 665 477 0 0 0 chr17 10587627 10587679 -84684972 + (GA)n Simple_repeat Simple_repeat 1 53 0 1 665 813 289 53 0 chr17 10588468 10588655 -84683996 + B3 SINE B2 15 211 -5 1 665 31 0 0 0 chr17 10588659 10588690 -84683961 + AT_rich Low_complexity Low_complexity 1 31 0 1 665 303 210 0 0 chr17 10588776 10588838 -84683813 + L1MA5A LINE L1 6157 6218 -79 1 665 1134 94 0 0 chr17 10588873 10589043 -84683608 + (TG)n Simple_repeat Simple_repeat 1 170 0 1 665 555 16 0 0 chr17 10591517 10591581 -84681070 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 665 279 0 0 0 chr17 10591581 10591611 -84681040 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 665 309 314 107 51 chr17 10592534 10592712 -84679939 - MER5A DNA MER1_type 0 189 2 1 665 201 175 0 0 chr17 10593912 10593952 -84678699 + CT-rich Low_complexity Low_complexity 1 40 0 1 665 205 259 0 45 chr17 10593966 10594055 -84678596 + (TCTG)n Simple_repeat Simple_repeat 2 86 0 1 665 350 228 14 7 chr17 10594485 10594577 -84678074 - MIRc SINE MIR -148 128 35 1 665 432 228 21 11 chr17 10596526 10596619 -84676032 + B1F1 SINE Alu 9 102 -47 1 665 1175 62 7 7 chr17 10596647 10596793 -84675858 - B1_Mm SINE Alu 0 147 2 1 665 287 296 204 15 chr17 10601207 10601344 -84671307 + RSINE1 SINE B4 3 165 0 1 665 342 220 124 22 chr17 10602093 10602194 -84670457 + B1F SINE Alu 5 117 -3 1 665 1234 18 25 11 chr17 10602230 10602511 -84670140 + (TCTA)n Simple_repeat Simple_repeat 1 285 0 1 665 28 0 0 0 chr17 10602642 10602670 -84669981 + AT_rich Low_complexity Low_complexity 1 28 0 1 665 237 148 70 0 chr17 10602781 10602909 -84669742 + (TA)n Simple_repeat Simple_repeat 2 138 0 1 665 308 43 0 21 chr17 10602972 10603019 -84669632 + (TCTCTG)n Simple_repeat Simple_repeat 3 48 0 1 665 261 57 0 0 chr17 10603019 10603053 -84669598 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 665 329 279 0 85 chr17 10603061 10603155 -84669496 - B1F1 SINE Alu -63 86 1 1 665 276 299 26 78 chr17 10603064 10603180 -84669471 - B4A SINE B4 -120 172 63 1 665 189 107 0 0 chr17 10603422 10603450 -84669201 + (TTG)n Simple_repeat Simple_repeat 3 30 0 1 665 513 0 0 0 chr17 10603847 10603904 -84668747 + (TC)n Simple_repeat Simple_repeat 1 57 0 1 665 308 169 91 0 chr17 10604227 10604304 -84668347 + Lx7 LINE L1 7609 7692 -4 1 665 231 36 0 0 chr17 10604754 10604782 -84667869 + (CAA)n Simple_repeat Simple_repeat 3 30 0 1 665 838 271 16 115 chr17 10606449 10606740 -84665911 + B4 SINE B4 4 271 -21 1 665 279 0 0 0 chr17 10606740 10606771 -84665880 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 665 279 0 0 0 chr17 10606771 10606801 -84665850 + (GA)n Simple_repeat Simple_repeat 1 31 0 1 665 838 271 16 115 chr17 10606801 10606829 -84665822 + B4 SINE B4 272 291 -1 1 665 326 22 43 0 chr17 10607568 10607614 -84665037 + (CAGA)n Simple_repeat Simple_repeat 4 51 0 1 665 387 198 143 0 chr17 10607614 10607705 -84664946 + HAL1-3A_ME LINE L1 1978 2081 -777 1 665 311 358 24 31 chr17 10609981 10610108 -84662543 - LFSINE_Vert SINE SINE -26 433 308 1 665 5296 73 1 6 chr17 10611173 10611861 -84660790 - L1_Mus1 LINE L1 0 6567 5883 1 665 17559 71 15 0 chr17 10611861 10614149 -84658502 + L1_Mus1 LINE L1 3544 5864 -19 1 665 187 243 0 91 chr17 10614633 10614710 -84657941 + L2 LINE L2 1532 1601 -1818 1 665 241 267 33 0 chr17 10614909 10614975 -84657676 - MIRb SINE MIR -12 264 187 1 665 422 219 151 91 chr17 10615049 10615235 -84657416 - B3A SINE B2 -1 197 1 1 665 355 289 131 21 chr17 10615484 10615629 -84657022 + RSINE1 SINE B4 3 163 -2 1 665 261 135 0 0 chr17 10615851 10615903 -84656748 + (A)n Simple_repeat Simple_repeat 1 52 0 1 665 26 50 0 0 chr17 10616299 10616339 -84656312 + AT_rich Low_complexity Low_complexity 1 40 0 1 666 231 114 0 0 chr17 10617579 10617614 -84655037 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 666 225 276 91 41 chr17 10617722 10617843 -84654808 + MIRb SINE MIR 79 205 -63 1 666 641 224 169 28 chr17 10618789 10619037 -84653614 + B4A SINE B4 1 283 -9 1 666 195 162 0 0 chr17 10619054 10619091 -84653560 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 666 181 316 65 49 chr17 10619378 10619501 -84653150 - MIRb SINE MIR -125 143 19 2 666 186 282 35 93 chr17 10620001 10620087 -84652564 - L4 LINE RTE -1345 684 604 2 666 436 121 30 0 chr17 10620087 10620186 -84652465 + (TATG)n Simple_repeat Simple_repeat 3 104 0 2 666 234 0 0 0 chr17 10620186 10620212 -84652439 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 2 666 755 235 16 43 chr17 10620234 10620421 -84652230 - B3 SINE B2 -34 182 1 2 666 370 351 0 11 chr17 10620959 10621135 -84651516 + (CATATA)n Simple_repeat Simple_repeat 6 179 0 2 666 789 286 33 101 chr17 10621400 10621707 -84650944 + B4A SINE B4 2 287 -5 2 666 468 207 0 0 chr17 10621745 10621866 -84650785 + (CA)n Simple_repeat Simple_repeat 2 122 0 2 666 841 243 59 0 chr17 10623517 10623719 -84648932 + B3 SINE B2 1 214 -2 2 666 537 44 0 0 chr17 10624165 10624233 -84648418 + (CA)n Simple_repeat Simple_repeat 2 69 0 2 666 699 300 26 86 chr17 10624681 10624984 -84647667 - B4A SINE B4 -6 286 2 2 666 704 305 32 159 chr17 10626119 10626234 -84646417 + MLT1B LTR MaLR 40 148 -242 2 666 1181 54 0 13 chr17 10626234 10626383 -84646268 - B1_Mus2 SINE Alu 0 147 1 2 666 704 305 32 159 chr17 10626383 10626669 -84645982 + MLT1B LTR MaLR 149 390 0 2 666 452 301 27 109 chr17 10627766 10627949 -84644702 + B4A SINE B4 1 168 -124 2 666 341 93 0 18 chr17 10627967 10628022 -84644629 + (AGGGGG)n Simple_repeat Simple_repeat 6 59 0 2 666 287 146 18 0 chr17 10628161 10628216 -84644435 + GA-rich Low_complexity Low_complexity 2 57 0 2 666 312 266 24 81 chr17 10628216 10628339 -84644312 + L1M4b LINE L1 2220 2335 -4999 2 666 801 107 27 0 chr17 10629112 10629224 -84643427 + B1_Mus2 SINE Alu 10 124 -23 2 666 25 0 0 0 chr17 10629490 10629515 -84643136 + GC_rich Low_complexity Low_complexity 1 25 0 2 666 826 174 7 14 chr17 10629869 10630009 -84642642 - B1_Mur1 SINE Alu -1 148 10 2 666 25 31 0 0 chr17 10630125 10630157 -84642494 + AT_rich Low_complexity Low_complexity 1 32 0 2 666 1185 34 0 75 chr17 10630634 10630794 -84641857 - B1_Mus1 SINE Alu 0 148 1 2 666 1287 108 0 0 chr17 10631137 10631387 -84641264 + (TCCA)n Simple_repeat Simple_repeat 1 250 0 2 666 203 282 89 57 chr17 10635688 10635812 -84636839 + MIRm SINE MIR 11 138 -138 2 666 8725 20 6 3 chr17 10635864 10636859 -84635792 + L1Md_F3 LINE L1 5587 6584 0 2 666 308 240 49 20 chr17 10637478 10637580 -84635071 - L1MA4A LINE L1 -396 5907 5803 2 666 300 53 0 0 chr17 10637580 10637618 -84635033 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 666 564 234 7 267 chr17 10638390 10638675 -84633976 + MT2B LTR ERVL 3 213 -388 2 666 1314 179 23 15 chr17 10638660 10638926 -84633725 - ORR1B1-int LTR MaLR -478 1031 764 2 666 233 272 85 12 chr17 10638897 10638979 -84633672 - B1_Mur3 SINE Alu 0 149 62 2 666 1049 283 146 44 chr17 10638983 10639713 -84632938 + Lx8 LINE L1 5277 6081 -1615 2 666 242 358 0 0 chr17 10639751 10639832 -84632819 + Lx8 LINE L1 6580 6660 -813 2 666 617 89 28 4 chr17 10639845 10639943 -84632708 + RLTR13B1 LTR ERVK 799 964 -14 2 666 1167 110 23 6 chr17 10639949 10640123 -84632528 + RLTR13B1 LTR ERVK 717 893 0 2 666 566 363 113 18 chr17 10640123 10640842 -84631809 + Lx8 LINE L1 6687 7473 0 2 666 214 345 162 20 chr17 10641220 10641522 -84631129 + L2a LINE L2 3031 3375 -51 2 666 351 44 0 0 chr17 10641826 10641871 -84630780 + (CAA)n Simple_repeat Simple_repeat 3 47 0 2 666 184 368 66 22 chr17 10644212 10644348 -84628303 - L2 LINE L2 -3273 146 5 2 666 402 186 0 0 chr17 10645965 10646051 -84626600 + (TG)n Simple_repeat Simple_repeat 2 87 0 2 666 498 214 102 0 chr17 10647704 10647802 -84624849 - PB1D9 SINE Alu 0 120 13 2 666 182 37 0 36 chr17 10647882 10647910 -84624741 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 2 666 605 228 216 10 chr17 10647926 10648130 -84624521 + B4A SINE B4 43 288 -4 2 666 250 315 141 68 chr17 10651051 10651228 -84621423 - LTR81A LTR ERV1? -570 780 591 2 666 183 129 0 0 chr17 10651773 10651804 -84620847 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 666 1087 249 47 58 chr17 10652008 10652321 -84620330 + MTEa LTR MaLR 1 315 -64 2 666 708 86 0 0 chr17 10652321 10652426 -84620225 + (TC)n Simple_repeat Simple_repeat 1 105 0 2 666 1087 249 47 58 chr17 10652426 10652492 -84620159 + MTEa LTR MaLR 316 376 -3 2 666 845 211 7 7 chr17 10652573 10652721 -84619930 + RSINE1 SINE B4 9 156 -9 2 666 240 329 68 34 chr17 10656960 10657108 -84615543 + MER117 DNA MER1_type 14 166 -31 2 666 492 153 0 0 chr17 10657454 10657539 -84615112 + CT-rich Low_complexity Low_complexity 1 85 0 2 666 1242 87 0 0 chr17 10658857 10659030 -84613621 + (TTCC)n Simple_repeat Simple_repeat 4 176 0 2 666 225 94 0 0 chr17 10659034 10659066 -84613585 + (TCCC)n Simple_repeat Simple_repeat 4 35 0 2 666 210 24 22 67 chr17 10659903 10659948 -84612703 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 666 862 154 0 14 chr17 10660290 10660435 -84612216 + B1_Mur4 SINE Alu 2 144 -6 2 666 375 211 70 44 chr17 10661546 10661660 -84610991 + L1MA8 LINE L1 6005 6121 -170 2 666 638 246 133 11 chr17 10661670 10661700 -84610951 - B3 SINE B2 -5 211 182 2 666 351 65 0 0 chr17 10661700 10661746 -84610905 + (TATG)n Simple_repeat Simple_repeat 1 46 0 2 666 638 246 133 11 chr17 10661746 10661896 -84610755 - B3 SINE B2 -35 181 10 2 666 1881 244 118 20 chr17 10661914 10662475 -84610176 - RMER20B LTR ERVK 0 627 12 2 666 413 272 108 52 chr17 10663084 10663278 -84609373 - MER3 DNA MER1_type -3 206 2 2 666 1164 241 104 26 chr17 10663289 10663634 -84609017 + MTE2a LTR MaLR 1 372 -7 2 666 1624 200 83 9 chr17 10663746 10664094 -84608557 - ORR1D1 LTR MaLR 0 374 1 2 666 523 289 179 51 chr17 10664095 10664470 -84608181 - L1MC4a LINE L1 -1088 6954 6521 2 666 252 0 0 0 chr17 10665596 10665624 -84607027 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 666 216 232 18 0 chr17 10670722 10670778 -84601873 + (TA)n Simple_repeat Simple_repeat 1 57 0 2 666 216 0 0 0 chr17 10671185 10671209 -84601442 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 666 310 318 34 0 chr17 10672046 10672134 -84600517 + MER81 DNA AcHobo 24 114 0 2 666 255 61 0 0 chr17 10672607 10672640 -84600011 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 2 666 936 118 22 0 chr17 10672647 10672783 -84599868 + B1_Mus2 SINE Alu 9 147 0 2 666 351 349 25 0 chr17 10673741 10673881 -84598770 + MIRb SINE MIR 5 159 -109 2 666 519 135 0 0 chr17 10673956 10674052 -84598599 + (GGGAGA)n Simple_repeat Simple_repeat 4 99 0 2 666 255 31 0 0 chr17 10674740 10674772 -84597879 + (GGA)n Simple_repeat Simple_repeat 1 32 0 2 666 252 349 10 0 chr17 10675159 10675273 -84597378 + GA-rich Low_complexity Low_complexity 1 115 0 2 666 464 0 18 0 chr17 10675466 10675522 -84597129 + (TC)n Simple_repeat Simple_repeat 1 57 0 2 666 25 0 0 0 chr17 10675972 10675997 -84596654 + AT_rich Low_complexity Low_complexity 1 25 0 2 666 366 335 71 71 chr17 10680254 10680316 -84592335 + B4 SINE B4 31 92 -200 2 666 631 277 22 0 chr17 10680316 10680453 -84592198 + B1_Mur1 SINE Alu 1 140 -9 2 666 746 246 32 55 chr17 10680464 10680683 -84591968 + B3 SINE B2 2 215 -1 2 666 246 32 0 0 chr17 10681820 10681851 -84590800 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 666 270 73 0 0 chr17 10683215 10683256 -84589395 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 666 603 0 0 0 chr17 10685940 10686007 -84586644 + (TTCTC)n Simple_repeat Simple_repeat 1 67 0 2 666 342 0 0 0 chr17 10686432 10686470 -84586181 + (CAG)n Simple_repeat Simple_repeat 2 39 0 2 666 198 128 0 0 chr17 10688136 10688175 -84584476 + (TC)n Simple_repeat Simple_repeat 2 40 0 2 666 1058 123 28 39 chr17 10688247 10688425 -84584226 - URR1B DNA MER1_type 0 225 50 2 666 517 282 47 60 chr17 10688425 10688474 -84584177 + CYRA11_Mm Unknown Y-chromosome 190 395 -222 2 666 237 33 0 0 chr17 10688842 10688872 -84583779 + (TTG)n Simple_repeat Simple_repeat 2 31 0 2 666 232 301 40 99 chr17 10689417 10689568 -84583083 + MIR SINE MIR 2 143 -125 2 666 241 203 17 17 chr17 10689633 10689693 -84582958 + (TATATG)n Simple_repeat Simple_repeat 5 64 0 2 666 312 27 0 0 chr17 10690327 10690364 -84582287 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 666 282 244 710 0 chr17 10691970 10692087 -84580564 - RMER30 DNA MER1_type -1 201 2 2 666 669 101 0 0 chr17 10692110 10692209 -84580442 + (CAA)n Simple_repeat Simple_repeat 1 99 0 2 666 1497 22 78 0 chr17 10692470 10692488 -84580163 - B2_Mm1a SINE B2 0 193 176 2 666 279 0 0 0 chr17 10692488 10692519 -84580132 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 2 666 1497 22 78 0 chr17 10692519 10692679 -84579972 - B2_Mm1a SINE B2 -18 175 2 2 666 848 113 0 68 chr17 10692683 10692844 -84579807 - L1Md_F2 LINE L1 0 6582 6433 2 666 6393 50 5 1 chr17 10692919 10693703 -84578948 - L1Md_F2 LINE L1 0 6582 5796 2 666 337 306 159 25 chr17 10694256 10694457 -84578194 + MLT1B LTR MaLR 156 383 -7 2 666 290 75 38 0 chr17 10694996 10695049 -84577602 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 2 666 2462 24 0 0 chr17 10695575 10695862 -84576789 - MT2_Mm LTR ERVL -206 287 1 2 666 319 0 0 0 chr17 10695862 10695900 -84576751 - MERVL-int LTR ERVL 0 5485 5448 2 666 338 153 26 53 chr17 10695900 10695976 -84576675 - ORR1A3-int LTR MaLR -1323 640 567 2 666 1040 24 24 0 chr17 10695976 10696103 -84576548 - MERVL-int LTR ERVL -114 5371 5242 2 666 414 272 104 121 chr17 10696761 10697117 -84575534 + L1M2 LINE L1 5258 5607 -693 2 666 241 275 358 0 chr17 10697117 10697226 -84575425 + RSINE1 SINE B4 3 150 -15 2 666 433 254 164 12 chr17 10697256 10697427 -84575224 + L1M2 LINE L1 5596 5792 -508 2 666 725 235 188 2 chr17 10697421 10697762 -84574889 + Lx8 LINE L1 4844 5267 -613 2 666 2420 265 60 18 chr17 10697755 10698443 -84574208 + Lx8 LINE L1 5430 6166 -1307 2 666 405 0 0 0 chr17 10698443 10698488 -84574163 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 666 2420 275 105 22 chr17 10698488 10698752 -84573899 + Lx8 LINE L1 6167 6482 -991 2 666 252 0 0 0 chr17 10699634 10699662 -84572989 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 666 189 0 0 0 chr17 10700768 10700789 -84571862 + (TCCC)n Simple_repeat Simple_repeat 1 21 0 3 666 2355 157 68 2 chr17 10700957 10701352 -84571299 + MTC LTR MaLR 1 421 0 3 666 1199 56 0 0 chr17 10701565 10701708 -84570943 - B1_Mm SINE Alu -1 146 4 3 666 1478 147 16 20 chr17 10705121 10705371 -84567280 + Lx9 LINE L1 6915 7163 -481 3 666 316 262 106 13 chr17 10706987 10707138 -84565513 + B4 SINE B4 126 290 -2 3 666 188 266 31 15 chr17 10707191 10707256 -84565395 - MIRc SINE MIR -118 150 85 3 666 326 333 67 36 chr17 10709036 10709201 -84563450 + MLT1D LTR MaLR 33 202 -303 3 666 350 350 28 28 chr17 10709265 10709447 -84563204 + MLT1D LTR MaLR 320 501 -4 3 666 189 0 0 0 chr17 10709558 10709579 -84563072 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 666 233 289 88 32 chr17 10709855 10709980 -84562671 + MER53 DNA hAT 57 188 -5 3 666 219 88 0 0 chr17 10712953 10712987 -84559664 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 3 666 476 230 70 21 chr17 10716581 10716723 -84555928 + B1F SINE Alu 1 149 0 3 666 1085 128 209 0 chr17 10717212 10717399 -84555252 - URR1A DNA MER1_type 0 226 1 3 666 265 325 49 16 chr17 10721672 10721794 -84550857 + MLT1D LTR MaLR 378 503 -2 3 666 798 183 0 0 chr17 10722753 10722922 -84549729 + GA-rich Low_complexity Low_complexity 1 169 0 3 666 563 259 11 98 chr17 10725149 10725333 -84547318 - RMER30 DNA MER1_type -1 201 34 3 666 433 348 36 5 chr17 10725937 10726159 -84546492 + MER45B DNA Tip100 320 548 -492 3 666 467 304 86 59 chr17 10726200 10726490 -84546161 + MER45B DNA Tip100 716 1013 -27 3 666 325 211 56 14 chr17 10726743 10726815 -84545836 + ID_B1 SINE B4 142 216 -8 3 666 538 222 0 41 chr17 10728154 10728276 -84544375 - B1F SINE Alu -29 120 4 3 666 225 250 41 68 chr17 10728215 10728288 -84544363 - B4A SINE B4 -148 144 74 3 666 237 230 79 26 chr17 10728484 10728560 -84544091 - MLT1C LTR MaLR -107 398 319 3 666 351 63 31 16 chr17 10728659 10728723 -84543928 + (GA)n Simple_repeat Simple_repeat 1 65 0 3 666 446 261 64 74 chr17 10728734 10728937 -84543714 - MTEa LTR MaLR -163 216 16 3 666 318 271 90 35 chr17 10729012 10729157 -84543494 - MLT1C LTR MaLR -256 211 59 3 666 7759 84 36 5 chr17 10729407 10730528 -84542123 + Lx LINE L1 5528 6649 -5 3 666 576 0 0 0 chr17 10731035 10731099 -84541552 + (TCTA)n Simple_repeat Simple_repeat 2 65 0 3 666 489 296 74 65 chr17 10731643 10731860 -84540791 + B4 SINE B4 57 275 -17 3 666 546 79 0 0 chr17 10731868 10731944 -84540707 + (CA)n Simple_repeat Simple_repeat 1 76 0 3 666 483 87 0 0 chr17 10732340 10732409 -84540242 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 666 840 183 214 2 chr17 10733872 10734189 -84538462 + MTD LTR MaLR 8 419 0 3 666 527 215 17 6 chr17 10734226 10734404 -84538247 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 666 215 173 0 19 chr17 10734434 10734487 -84538164 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 666 556 285 87 42 chr17 10734524 10734788 -84537863 - B4A SINE B4 -16 276 1 3 666 2387 280 104 63 chr17 10735381 10736377 -84536274 + Lx8 LINE L1 6177 7234 -239 3 666 1010 83 27 20 chr17 10736377 10736524 -84536127 - B1_Mus1 SINE Alu 0 148 1 3 666 2387 280 104 63 chr17 10736524 10736651 -84536000 + Lx8 LINE L1 7235 7346 -127 3 666 1686 279 115 46 chr17 10736653 10737419 -84535232 + Lx9 LINE L1 6593 7411 -233 3 666 256 154 103 62 chr17 10737649 10737746 -84534905 + Lx8 LINE L1 7371 7471 -2 3 666 655 253 0 7 chr17 10737808 10737955 -84534696 - B1_Mus1 SINE Alu -1 147 2 3 666 240 146 21 0 chr17 10737957 10738005 -84534646 - L1MA6 LINE L1 -24 6276 6228 3 666 429 197 0 0 chr17 10738075 10738151 -84534500 + B3A SINE B2 2 77 -121 3 666 345 100 0 0 chr17 10738315 10738365 -84534286 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 666 1385 172 123 19 chr17 10739774 10740099 -84532552 + ORR1B2 LTR MaLR 1 359 -8 3 666 473 210 70 0 chr17 10740097 10740197 -84532454 + MTC LTR MaLR 50 156 -265 3 666 844 293 119 39 chr17 10740241 10740862 -84531789 + L1MB1 LINE L1 5305 5975 -193 3 666 234 269 114 15 chr17 10740864 10740996 -84531655 + L1MA10 LINE L1 6188 6332 -2 3 666 252 0 0 0 chr17 10742785 10742813 -84529838 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 666 182 233 17 0 chr17 10744375 10744435 -84528216 + CT-rich Low_complexity Low_complexity 4 64 0 3 666 27 0 0 0 chr17 10744520 10744547 -84528104 + AT_rich Low_complexity Low_complexity 1 27 0 3 666 228 298 105 9 chr17 10744547 10744652 -84527999 - PB1D10 SINE Alu 0 117 3 3 666 289 311 95 33 chr17 10745433 10745706 -84526945 - B4A SINE B4 -2 290 1 3 666 1279 228 97 42 chr17 10746041 10746494 -84526157 - L1MA9 LINE L1 -2 6310 5833 3 666 27 49 0 0 chr17 10746541 10746582 -84526069 + AT_rich Low_complexity Low_complexity 1 41 0 3 666 69 24 0 0 chr17 10746811 10746894 -84525757 + AT_rich Low_complexity Low_complexity 1 83 0 3 666 391 274 9 28 chr17 10746894 10747003 -84525648 - B3A SINE B2 -54 144 38 3 666 784 195 32 18 chr17 10747204 10747383 -84525268 - B3 SINE B2 -5 190 2 3 666 251 328 139 46 chr17 10747388 10747647 -84525004 - L1M4c LINE L1 -5674 710 428 3 83 713 282 104 12 chr17 10747736 10747987 -84524664 - L1M4c LINE L1 -6095 289 16 3 667 21 36 0 0 chr17 10747999 10748027 -84524624 + AT_rich Low_complexity Low_complexity 1 28 0 3 667 486 99 11 21 chr17 10750369 10750462 -84522189 + (TG)n Simple_repeat Simple_repeat 2 93 0 3 667 306 0 0 0 chr17 10751056 10751090 -84521561 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 667 285 265 15 0 chr17 10751103 10751171 -84521480 + B4A SINE B4 143 211 -81 3 667 1783 315 80 11 chr17 10751206 10751871 -84520780 + Lx8 LINE L1 6433 7143 -330 3 667 556 313 97 26 chr17 10752510 10752779 -84519872 - B4A SINE B4 -4 288 1 3 667 352 284 53 20 chr17 10753214 10753365 -84519286 + MIRb SINE MIR 99 254 -14 3 667 294 106 0 0 chr17 10753377 10753424 -84519227 + (CAA)n Simple_repeat Simple_repeat 2 48 0 3 667 1132 283 29 35 chr17 10753582 10753870 -84518781 + MTE2a LTR MaLR 8 293 -86 3 667 1132 212 105 46 chr17 10753870 10754221 -84518430 + ORR1D1 LTR MaLR 3 374 0 3 667 1132 283 29 35 chr17 10754221 10754280 -84518371 + MTE2a LTR MaLR 294 353 -26 3 667 439 195 0 0 chr17 10756369 10756446 -84516205 - PB1D7 SINE Alu -1 119 43 3 667 233 291 9 19 chr17 10756458 10756563 -84516088 + Kanga1 DNA Tc2 1639 1742 -3 3 667 213 121 0 0 chr17 10756768 10756801 -84515850 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 667 961 246 56 0 chr17 10758104 10758356 -84514295 + MTE2b LTR MaLR 112 377 -2 3 667 342 206 178 0 chr17 10758490 10758563 -84514088 - B4A SINE B4 -197 95 10 3 667 534 57 0 0 chr17 10759577 10759647 -84513004 + (CTGGGG)n Simple_repeat Simple_repeat 5 74 0 3 667 462 290 48 16 chr17 10761177 10761366 -84511285 + ID_B1 SINE B4 9 203 -21 3 667 213 229 0 99 chr17 10764023 10764144 -84508507 + (CACAA)n Simple_repeat Simple_repeat 1 109 0 3 667 387 309 63 21 chr17 10764396 10764538 -84508113 - RSINE1 SINE B4 -17 148 1 3 667 260 353 12 0 chr17 10765108 10765193 -84507458 + 5S rRNA rRNA 5 90 -31 3 667 2261 55 0 0 chr17 10765649 10765923 -84506728 - L1Md_F2 LINE L1 -12 6570 6297 3 667 252 286 15 85 chr17 10766023 10766153 -84506498 + ORR1D2 LTR MaLR 8 128 -242 3 667 594 0 0 0 chr17 10767811 10767877 -84504774 + (TCCC)n Simple_repeat Simple_repeat 3 68 0 3 667 692 120 17 0 chr17 10769714 10769831 -84502820 + (TTCC)n Simple_repeat Simple_repeat 2 120 0 3 667 711 203 0 51 chr17 10769840 10769996 -84502655 - B1_Mur3 SINE Alu -1 148 1 3 667 924 250 163 12 chr17 10770186 10770437 -84502214 - B4A SINE B4 -2 290 2 3 667 498 33 0 0 chr17 10773186 10773246 -84499405 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 667 324 0 0 0 chr17 10773296 10773332 -84499319 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 667 455 273 35 0 chr17 10773332 10773475 -84499176 - B4 SINE B4 -100 192 45 3 667 21 36 0 0 chr17 10774679 10774707 -84497944 + AT_rich Low_complexity Low_complexity 1 28 0 3 667 581 220 140 21 chr17 10775628 10775814 -84496837 + ID_B1 SINE B4 3 210 -14 3 667 315 0 0 0 chr17 10775819 10775854 -84496797 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 667 396 0 0 0 chr17 10776129 10776173 -84496478 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 667 283 337 35 31 chr17 10781478 10781735 -84490916 - L1M5 LINE L1 -3194 2952 2695 3 667 323 331 31 31 chr17 10782102 10782230 -84490421 + B4A SINE B4 71 198 -94 3 667 306 345 116 29 chr17 10782830 10783278 -84489373 + HAL1 LINE L1 983 1469 -1038 3 667 674 218 0 14 chr17 10783298 10783442 -84489209 - B1_Mur2 SINE Alu -6 143 2 3 667 319 297 91 73 chr17 10785145 10785432 -84487219 - B4 SINE B4 0 292 1 3 667 243 317 0 12 chr17 10786003 10786086 -84486565 + CT-rich Low_complexity Low_complexity 2 83 0 3 667 330 26 0 0 chr17 10786677 10786716 -84485935 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 667 30 0 0 0 chr17 10787325 10787355 -84485296 + AT_rich Low_complexity Low_complexity 1 30 0 3 667 247 65 21 21 chr17 10789166 10789213 -84483438 + (CAAAC)n Simple_repeat Simple_repeat 2 48 0 3 667 180 0 0 0 chr17 10789567 10789587 -84483064 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3 667 233 250 55 55 chr17 10791172 10791282 -84481369 - LTR86B2 LTR ERVL -300 187 78 3 667 21 57 0 0 chr17 10791586 10791621 -84481030 + AT_rich Low_complexity Low_complexity 1 35 0 3 667 255 61 0 0 chr17 10793072 10793105 -84479546 + (TCCC)n Simple_repeat Simple_repeat 3 35 0 3 667 359 274 110 37 chr17 10795435 10795598 -84477053 + B4A SINE B4 1 175 -117 3 667 303 290 36 27 chr17 10795766 10795876 -84476775 + L1MEf LINE L1 1297 1407 -4793 4 667 560 173 0 58 chr17 10796510 10796700 -84475951 + (TA)n Simple_repeat Simple_repeat 2 180 0 4 667 214 250 18 0 chr17 10796714 10796770 -84475881 + (CA)n Simple_repeat Simple_repeat 1 57 0 4 667 358 327 67 30 chr17 10796802 10797070 -84475581 - L1MC LINE L1 -2315 5567 5290 4 667 1085 101 6 0 chr17 10800033 10800212 -84472439 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 4 667 285 281 36 12 chr17 10801385 10801468 -84471183 + MIR SINE MIR 105 189 -73 4 667 1974 158 62 13 chr17 10801604 10801977 -84470674 - MTC LTR MaLR -27 394 4 4 667 541 40 26 0 chr17 10804251 10804327 -84468324 + (TC)n Simple_repeat Simple_repeat 1 78 0 4 667 265 47 47 0 chr17 10804327 10804369 -84468282 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 667 446 292 20 21 chr17 10805111 10805290 -84467361 - L1MA4 LINE L1 -192 5964 5792 4 667 1240 305 37 102 chr17 10805297 10805583 -84467068 + L1M2 LINE L1 4484 4754 -1389 4 667 798 76 0 0 chr17 10805583 10805702 -84466949 + (CA)n Simple_repeat Simple_repeat 2 120 0 4 667 1240 305 37 102 chr17 10805702 10806254 -84466397 + L1M2 LINE L1 4755 5267 -876 4 667 401 265 80 14 chr17 10806320 10806458 -84466193 + L1_Mur1 LINE L1 5426 5572 -314 4 667 218 156 0 0 chr17 10806463 10806495 -84466156 + polypurine Low_complexity Low_complexity 2 33 0 4 667 762 162 23 0 chr17 10806497 10806670 -84465981 + GA-rich Low_complexity Low_complexity 4 180 0 4 667 535 343 17 25 chr17 10806677 10807022 -84465629 + Lx7 LINE L1 5537 5909 -1787 4 667 1478 81 24 5 chr17 10807401 10807613 -84465038 - L1Md_F2 LINE L1 -11 6571 6356 4 667 1202 73 0 0 chr17 10807948 10808112 -84464539 + B2_Mm2 SINE B2 1 164 -31 4 667 447 73 0 0 chr17 10808236 10808304 -84464347 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 667 331 330 0 0 chr17 10809121 10809224 -84463427 + (TG)n Simple_repeat Simple_repeat 2 104 0 4 667 386 161 23 0 chr17 10809231 10809318 -84463333 + (TATATG)n Simple_repeat Simple_repeat 4 92 0 4 667 729 256 85 52 chr17 10809321 10809593 -84463058 - B4A SINE B4 0 292 12 4 667 4168 67 2 2 chr17 10811268 10811795 -84460856 - L1Md_T LINE L1 0 6582 6056 4 667 460 272 27 48 chr17 10812462 10812661 -84459990 + B4A SINE B4 81 282 -10 4 667 561 15 0 0 chr17 10812677 10812743 -84459908 + (CA)n Simple_repeat Simple_repeat 1 66 0 4 667 315 0 0 0 chr17 10812743 10812777 -84459874 + (GA)n Simple_repeat Simple_repeat 2 36 0 4 667 234 0 0 0 chr17 10813486 10813512 -84459139 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 667 441 36 0 0 chr17 10814142 10814197 -84458454 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 667 306 50 0 0 chr17 10815558 10815598 -84457053 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 667 541 302 39 0 chr17 10815607 10815786 -84456865 - B3A SINE B2 -11 187 2 4 667 23 54 0 0 chr17 10816562 10816599 -84456052 + AT_rich Low_complexity Low_complexity 1 37 0 4 667 343 66 32 32 chr17 10817167 10817230 -84455421 + (TCTCTG)n Simple_repeat Simple_repeat 2 64 0 4 667 180 0 0 0 chr17 10817881 10817901 -84454750 + (CAT)n Simple_repeat Simple_repeat 3 22 0 4 667 409 138 25 0 chr17 10817899 10817979 -84454672 + CT-rich Low_complexity Low_complexity 1 82 0 4 667 22 0 0 0 chr17 10818508 10818530 -84454121 + AT_rich Low_complexity Low_complexity 1 22 0 4 667 689 288 53 5 chr17 10818841 10819047 -84453604 - B3 SINE B2 0 216 1 4 667 661 289 86 43 chr17 10821137 10821226 -84451425 - B4 SINE B4 -24 268 169 4 667 1268 217 140 3 chr17 10821226 10821554 -84451097 - MTE2b LTR MaLR -4 375 3 4 667 661 289 86 43 chr17 10821554 10821721 -84450930 - B4 SINE B4 -124 168 1 4 667 495 266 56 21 chr17 10822653 10822795 -84449856 + RSINE1 SINE B4 4 150 -15 4 667 501 32 0 0 chr17 10822798 10822861 -84449790 + (CA)n Simple_repeat Simple_repeat 1 63 0 4 667 184 100 50 0 chr17 10823063 10823103 -84449548 + (GAAAA)n Simple_repeat Simple_repeat 2 43 0 4 667 1654 176 38 0 chr17 10823382 10823701 -84448950 + Lx9 LINE L1 7130 7460 -184 4 667 378 42 0 0 chr17 10824681 10824729 -84447922 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 667 623 13 13 0 chr17 10825188 10825264 -84447387 + (TTCC)n Simple_repeat Simple_repeat 2 78 0 4 667 355 241 24 0 chr17 10825318 10825401 -84447250 - B1F SINE Alu -7 142 58 4 667 263 194 72 29 chr17 10825765 10825834 -84446817 + L1MDa LINE L1 1600 1697 -4936 4 667 390 316 107 53 chr17 10826518 10827222 -84445429 + L1MDa LINE L1 2667 3408 -3129 4 667 674 161 18 12 chr17 10827562 10827732 -84444919 + (TCTA)n Simple_repeat Simple_repeat 3 173 0 4 667 584 248 14 34 chr17 10827837 10827983 -84444668 - RSINE1 SINE B4 -6 159 17 4 667 382 245 18 9 chr17 10829161 10829272 -84443379 - Charlie8 DNA MER1_type -1909 519 408 4 667 324 0 0 0 chr17 10829829 10829865 -84442786 + (TC)n Simple_repeat Simple_repeat 1 36 0 4 667 3062 88 7 0 chr17 10831197 10831605 -84441046 - L1_Mus1 LINE L1 0 6567 6157 4 667 374 228 0 25 chr17 10835662 10835824 -84436827 + (TATATG)n Simple_repeat Simple_repeat 1 158 0 4 667 352 281 0 0 chr17 10835828 10835942 -84436709 + (TG)n Simple_repeat Simple_repeat 1 114 0 4 667 558 43 0 0 chr17 10836477 10836546 -84436105 + (GA)n Simple_repeat Simple_repeat 1 69 0 4 667 21 0 0 0 chr17 10837245 10837266 -84435385 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 204 40 0 0 chr17 10837689 10837714 -84434937 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 4 667 23 0 0 0 chr17 10838363 10838386 -84434265 + AT_rich Low_complexity Low_complexity 1 23 0 4 667 849 203 7 7 chr17 10838396 10838540 -84434111 + B1_Mm SINE Alu 3 146 -1 4 667 237 225 30 23 chr17 10839123 10839255 -84433396 + (TATG)n Simple_repeat Simple_repeat 4 136 0 4 667 355 153 61 0 chr17 10839321 10839452 -84433199 + (TG)n Simple_repeat Simple_repeat 2 140 0 4 667 561 222 73 7 chr17 10839586 10839722 -84432929 + B1F SINE Alu 3 147 -2 4 667 306 0 0 0 chr17 10840200 10840234 -84432417 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 4 667 2701 115 71 43 chr17 10840332 10840794 -84431857 + IAPLTR2_Mm LTR ERVK 1 475 0 4 667 906 221 57 16 chr17 10840931 10841124 -84431527 - B3 SINE B2 -10 206 6 4 667 327 286 95 59 chr17 10841176 10841318 -84431333 - L1M5 LINE L1 -1815 4331 4189 4 667 258 32 0 0 chr17 10841318 10841349 -84431302 + (TCC)n Simple_repeat Simple_repeat 2 32 0 4 667 327 286 95 59 chr17 10841349 10841459 -84431192 - L1M5 LINE L1 -1958 4188 4071 4 667 201 339 0 0 chr17 10842203 10842268 -84430383 + GA-rich Low_complexity Low_complexity 3 67 0 4 667 21 36 0 0 chr17 10842382 10842410 -84430241 + AT_rich Low_complexity Low_complexity 1 28 0 4 667 187 304 239 0 chr17 10843062 10843154 -84429497 + MIR SINE MIR 29 142 -120 4 667 850 113 60 101 chr17 10844095 10844263 -84428388 + ORR1C1 LTR MaLR 1 161 -217 4 667 31428 101 11 18 chr17 10844266 10850263 -84422388 + L1_Mus1 LINE L1 613 6567 0 4 667 1456 154 13 0 chr17 10850267 10850500 -84422151 + ORR1C1 LTR MaLR 143 378 0 4 667 492 91 34 0 chr17 10852677 10852765 -84419886 + (TCCA)n Simple_repeat Simple_repeat 4 94 0 4 667 2571 140 50 2 chr17 10853382 10853782 -84418869 - MTC LTR MaLR 0 421 3 4 667 563 175 8 0 chr17 10854569 10854689 -84417962 + (TA)n Simple_repeat Simple_repeat 1 121 0 4 667 495 58 11 33 chr17 10856534 10856624 -84416027 + (CTGGGG)n Simple_repeat Simple_repeat 1 88 0 4 667 1192 227 117 47 chr17 10856624 10857070 -84415581 - RMER13A LTR ERVK -219 641 119 4 667 300 345 55 48 chr17 10857347 10857493 -84415158 - MIRb SINE MIR -121 147 1 4 667 511 301 136 48 chr17 10858817 10859089 -84413562 - MLT1A LTR MaLR -78 296 1 4 667 329 287 79 43 chr17 10859933 10860097 -84412554 + B4A SINE B4 1 170 -122 4 667 259 314 77 19 chr17 10860245 10860401 -84412250 + L2a LINE L2 2674 2838 -581 4 667 377 348 100 23 chr17 10860554 10860854 -84411797 + L2a LINE L2 3103 3425 -1 4 667 499 256 260 50 chr17 10861533 10861714 -84410937 - ID_B1 SINE B4 -4 220 2 4 667 25 31 0 0 chr17 10861874 10861906 -84410745 + AT_rich Low_complexity Low_complexity 1 32 0 4 667 739 220 168 52 chr17 10862662 10862931 -84409720 - ORR1E LTR MaLR 0 359 41 4 667 874 248 53 0 chr17 10862948 10863174 -84409477 + Lx8 LINE L1 6808 7045 -428 4 667 7241 54 0 0 chr17 10863791 10864662 -84407989 - L1Md_F2 LINE L1 0 6582 5712 4 667 4127 59 0 0 chr17 10864660 10865201 -84407450 + L1_Mm LINE L1 1406 1946 -3937 4 667 201 375 80 12 chr17 10865309 10865471 -84407180 - MIRb SINE MIR -30 238 66 4 667 702 288 177 37 chr17 10865689 10866090 -84406561 + MLT1C LTR MaLR 11 467 0 4 667 182 255 19 19 chr17 10867391 10867443 -84405208 + L2b LINE L2 3315 3366 -9 4 667 1058 261 67 26 chr17 10867868 10868210 -84404441 - ORR1E LTR MaLR -2 357 2 4 667 291 175 0 0 chr17 10868616 10868673 -84403978 + GA-rich Low_complexity Low_complexity 3 59 0 4 667 378 344 40 40 chr17 10869507 10869734 -84402917 - LFSINE_Vert SINE SINE -104 355 129 4 667 213 270 32 0 chr17 10870819 10870882 -84401769 - ID4 SINE ID -13 70 6 4 667 212 295 115 10 chr17 10871204 10871300 -84401351 + PB1 SINE Alu 4 109 -18 4 667 499 264 16 0 chr17 10871215 10871336 -84401315 + ID_B1 SINE B4 95 217 -7 4 667 28 48 0 0 chr17 10871420 10871462 -84401189 + AT_rich Low_complexity Low_complexity 1 42 0 4 667 2839 278 61 6 chr17 10871594 10872412 -84400239 - Lx8 LINE L1 -135 7338 6476 4 667 432 0 0 0 chr17 10873583 10873631 -84399020 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 667 612 282 8 0 chr17 10873841 10873965 -84398686 + B3A SINE B2 1 125 -73 4 667 20979 169 15 117 chr17 10873968 10876103 -84396548 + L1_Mus2 LINE L1 1456 3129 -2757 4 667 8577 49 6 0 chr17 10876103 10877081 -84395570 + L1Md_F2 LINE L1 5587 6570 -12 5 83 20979 141 15 88 chr17 10877081 10880565 -84392086 + L1_Mus2 LINE L1 3130 6564 -2 4 668 5137 74 0 25 chr17 10880582 10881475 -84391176 - L1VL1 LINE L1 -2395 1303 433 5 668 315 161 0 0 chr17 10882889 10882945 -84389706 + GA-rich Low_complexity Low_complexity 2 57 0 5 668 299 186 45 23 chr17 10883760 10883892 -84388759 + (TATATG)n Simple_repeat Simple_repeat 2 136 0 5 668 378 42 0 0 chr17 10883916 10883964 -84388687 + (TAGA)n Simple_repeat Simple_repeat 4 51 0 5 668 350 311 109 8 chr17 10885559 10885815 -84386836 + L1MEc LINE L1 683 964 -5436 5 668 811 92 183 0 chr17 10885867 10885987 -84386664 - B1_Mm SINE Alu -1 146 5 5 668 236 289 71 47 chr17 10886092 10886219 -84386432 + L1MEc LINE L1 1203 1332 -5068 5 668 255 333 0 0 chr17 10886681 10886750 -84385901 - ID4_ SINE ID 0 83 15 5 668 1343 212 4 15 chr17 10886886 10887145 -84385506 + L1_Rod LINE L1 5539 5794 -53 5 668 232 219 123 15 chr17 10887222 10887287 -84385364 + Lx9 LINE L1 7388 7459 -185 5 668 1579 205 106 5 chr17 10887349 10887717 -84384934 + Lx9 LINE L1 6957 7361 -283 5 668 1282 61 0 0 chr17 10887722 10887870 -84384781 + B1_Mus1 SINE Alu 1 148 0 5 668 346 222 195 12 chr17 10887894 10888058 -84384593 + L1MEc LINE L1 2064 2257 -4143 5 668 858 249 59 13 chr17 10888200 10888516 -84384135 - MTE2b LTR MaLR -8 371 2 5 668 438 330 71 53 chr17 10888525 10888992 -84383659 + L1MEc LINE L1 2512 2986 -3333 5 668 444 141 21 43 chr17 10889085 10889226 -84383425 + GA-rich Low_complexity Low_complexity 3 140 0 5 668 320 343 121 62 chr17 10889232 10889555 -84383096 + ORR1E LTR MaLR 9 350 -9 5 668 411 300 99 18 chr17 10889710 10890043 -84382608 - L1MB2 LINE L1 -2 6169 5810 5 668 314 211 242 0 chr17 10890183 10890278 -84382373 + RSINE1 SINE B4 36 153 -12 5 668 453 36 0 0 chr17 10890287 10890342 -84382309 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 5 668 423 0 0 0 chr17 10891457 10891504 -84381147 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 668 3642 53 26 2 chr17 10892004 10892463 -84380188 + L1_Mm LINE L1 5118 5616 -562 5 668 8498 51 8 2 chr17 10892463 10893450 -84379201 + L1Md_F2 LINE L1 5588 6580 -2 5 668 1202 280 22 24 chr17 10893450 10893500 -84379151 + L1_Mm LINE L1 5617 5665 -513 5 668 244 82 0 76 chr17 10894592 10894671 -84377980 + A-rich Low_complexity Low_complexity 6 78 0 5 668 202 287 22 33 chr17 10895276 10895366 -84377285 + GA-rich Low_complexity Low_complexity 2 90 0 5 668 261 0 0 0 chr17 10895462 10895491 -84377160 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 668 328 317 123 16 chr17 10896581 10896947 -84375704 + L1MEf LINE L1 1115 1519 -4681 5 668 322 290 140 52 chr17 10897079 10897308 -84375343 + L1MEf LINE L1 1860 2108 -4092 5 668 31 0 0 0 chr17 10897936 10897967 -84374684 + AT_rich Low_complexity Low_complexity 1 31 0 5 668 632 268 7 40 chr17 10898224 10898372 -84374279 - B1_Mur1 SINE Alu 0 149 7 5 668 296 237 68 0 chr17 10898732 10898791 -84373860 - ID4_ SINE ID 0 83 21 5 668 195 245 0 54 chr17 10899267 10899323 -84373328 - L2c LINE L2 -5 3382 3330 5 668 277 188 0 0 chr17 10901928 10901976 -84370675 + ID SINE ID 11 58 -166 5 668 422 294 0 136 chr17 10902016 10902185 -84370466 + MLT2C2 LTR ERVL 406 551 -8 5 668 204 296 37 0 chr17 10904159 10904213 -84368438 - L3 LINE CR1 -106 4383 4328 5 668 381 203 87 31 chr17 10904709 10904836 -84367815 - Arthur1 DNA Tip100 -311 3636 3503 5 668 423 0 0 0 chr17 10905398 10905445 -84367206 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 668 3799 160 91 9 chr17 10905446 10906083 -84366568 + RLTR17 LTR ERVK 4 692 0 5 668 231 254 0 0 chr17 10906123 10906186 -84366465 - Arthur1 DNA Tip100 -696 3251 3189 5 668 198 0 0 0 chr17 10906187 10906209 -84366442 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 5 668 233 353 59 20 chr17 10906266 10906419 -84366232 - Arthur1 DNA Tip100 -3133 814 656 5 668 260 352 190 37 chr17 10906599 10906841 -84365810 - Arthur1 DNA Tip100 -3666 281 3 5 668 369 0 0 0 chr17 10909401 10909442 -84363209 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 5 668 414 238 35 185 chr17 10909642 10909874 -84362777 + B3A SINE B2 1 197 -1 5 668 598 331 59 26 chr17 10910985 10911326 -84361325 - HERVL40-int LTR ERVL -2807 2723 2372 5 668 241 276 20 80 chr17 10912944 10913079 -84359572 - MTE2a LTR MaLR -250 129 1 5 668 430 278 165 6 chr17 10913154 10913324 -84359327 + MLT1A0 LTR MaLR 168 364 -1 5 668 369 0 0 0 chr17 10916026 10916067 -84356584 + (CACAA)n Simple_repeat Simple_repeat 5 45 0 5 668 403 294 0 9 chr17 10916664 10916774 -84355877 + MLT1A1 LTR MaLR 300 408 0 5 668 388 316 2 0 chr17 10918078 10918182 -84354469 + L2b LINE L2 3287 3424 -2 5 668 422 326 69 107 chr17 10918219 10918611 -84354040 + MTEa LTR MaLR 3 379 0 5 668 495 196 0 0 chr17 10918795 10918953 -84353698 + (CA)n Simple_repeat Simple_repeat 1 158 0 5 668 315 113 19 0 chr17 10918962 10919015 -84353636 + HAL1-3A_ME LINE L1 1976 2029 -829 5 668 615 183 0 0 chr17 10919039 10919219 -84353432 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 668 514 144 34 22 chr17 10919199 10919377 -84353274 + (CAGA)n Simple_repeat Simple_repeat 1 180 0 5 668 342 284 73 73 chr17 10920991 10921238 -84351413 + Lx8 LINE L1 6679 6925 -771 5 668 842 237 63 169 chr17 10921866 10922262 -84350389 - ORR1E LTR MaLR -5 354 1 5 668 386 316 166 12 chr17 10923858 10924105 -84348546 + B4A SINE B4 2 286 -6 5 668 224 218 18 18 chr17 10924162 10924218 -84348433 + (TAGA)n Simple_repeat Simple_repeat 4 59 0 5 668 253 280 8 123 chr17 10924712 10924735 -84347916 + ID SINE ID 62 70 -154 5 668 288 232 34 47 chr17 10924735 10924836 -84347815 + PB1D7 SINE Alu 1 93 -27 5 668 533 158 10 0 chr17 10925424 10925525 -84347126 + GA-rich Low_complexity Low_complexity 1 102 0 5 668 186 43 0 0 chr17 10926814 10926837 -84345814 + (CCCCCA)n Simple_repeat Simple_repeat 4 26 0 5 668 308 218 0 0 chr17 10927321 10927408 -84345243 + (CAGC)n Simple_repeat Simple_repeat 2 88 0 5 668 373 284 103 15 chr17 10930069 10930205 -84342446 + MIRb SINE MIR 1 148 -120 5 668 207 167 0 0 chr17 10932097 10932133 -84340518 + CT-rich Low_complexity Low_complexity 1 36 0 5 668 29 28 0 0 chr17 10932144 10932180 -84340471 + AT_rich Low_complexity Low_complexity 1 36 0 5 668 293 308 40 48 chr17 10932321 10932447 -84340204 - RLTR14 LTR ERV1 -14 368 244 5 668 369 0 0 0 chr17 10932452 10932493 -84340158 + (TAAAA)n Simple_repeat Simple_repeat 2 42 0 5 668 363 250 0 0 chr17 10932752 10932820 -84339831 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 5 668 180 0 0 0 chr17 10934665 10934685 -84337966 + (A)n Simple_repeat Simple_repeat 1 20 0 5 668 1309 176 22 54 chr17 10935835 10936111 -84336540 + RMER10B LTR ERVL 1 267 -131 5 668 400 197 112 25 chr17 10936083 10936244 -84336407 + RMER10B LTR ERVL 150 324 -74 5 668 507 33 0 0 chr17 10936313 10936374 -84336277 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 5 668 183 80 0 0 chr17 10938866 10938891 -84333760 + (CATG)n Simple_repeat Simple_repeat 3 27 0 5 668 1115 197 54 0 chr17 10939406 10939609 -84333042 - B3 SINE B2 0 216 3 5 668 2647 158 90 24 chr17 10940297 10940829 -84331822 + RLTR40 LTR ERVK 244 810 -7 5 668 412 264 61 35 chr17 10940836 10940950 -84331701 + MTEa LTR MaLR 68 184 -195 5 668 543 118 0 0 chr17 10940978 10941063 -84331588 + (GA)n Simple_repeat Simple_repeat 1 85 0 5 668 345 222 12 36 chr17 10941074 10941158 -84331493 + MTEa LTR MaLR 180 261 -118 5 668 258 328 0 30 chr17 10941603 10941669 -84330982 + ID4_ SINE ID 1 64 -19 5 668 24 85 0 0 chr17 10944563 10944622 -84328029 + AT_rich Low_complexity Low_complexity 1 59 0 5 668 447 101 0 0 chr17 10944961 10945040 -84327611 + (CAAAA)n Simple_repeat Simple_repeat 2 80 0 5 668 1201 278 93 13 chr17 10945126 10945513 -84327138 - MTD LTR MaLR 0 419 2 5 668 23 54 0 0 chr17 10947476 10947513 -84325138 + AT_rich Low_complexity Low_complexity 1 37 0 5 668 248 200 17 0 chr17 10947650 10947710 -84324941 + GA-rich Low_complexity Low_complexity 3 63 0 5 668 23 0 0 0 chr17 10947930 10947953 -84324698 + AT_rich Low_complexity Low_complexity 1 23 0 5 668 182 37 37 0 chr17 10948167 10948194 -84324457 + (TA)n Simple_repeat Simple_repeat 1 28 0 5 668 432 282 50 22 chr17 10948333 10948514 -84324137 + L1MB2 LINE L1 5956 6141 -30 5 668 545 269 23 8 chr17 10948871 10949002 -84323649 - RSINE1 SINE B4 -29 136 4 5 668 360 286 202 10 chr17 10950440 10950738 -84321913 + Lx8 LINE L1 6958 7313 -160 5 668 232 250 60 0 chr17 10950822 10950906 -84321745 + (CAGG)n Simple_repeat Simple_repeat 4 92 0 5 668 1599 205 84 0 chr17 10951014 10951346 -84321305 + ORR1C2 LTR MaLR 25 384 0 5 668 782 350 77 3 chr17 10951944 10952256 -84320395 - MER2 DNA MER2_type -9 336 2 5 668 291 190 0 33 chr17 10952556 10952616 -84320035 + MER34 LTR ERV1 133 190 -352 5 668 210 71 0 0 chr17 10952616 10952644 -84320007 + (T)n Simple_repeat Simple_repeat 1 28 0 5 668 197 33 33 0 chr17 10952683 10952713 -84319938 + (TTTTA)n Simple_repeat Simple_repeat 3 33 0 5 668 1586 183 36 33 chr17 10952714 10953047 -84319604 - Lx3C LINE L1 -11 6965 6632 5 668 227 291 0 11 chr17 10954632 10954806 -84317845 + (CACTA)n Simple_repeat Simple_repeat 1 172 0 5 668 225 333 11 21 chr17 10954809 10954904 -84317747 + (CACTG)n Simple_repeat Simple_repeat 1 94 0 5 668 758 188 15 15 chr17 10954948 10955083 -84317568 + B3 SINE B2 82 216 0 5 668 478 227 35 90 chr17 10955343 10955488 -84317163 - MTEa LTR MaLR 0 379 243 5 668 291 28 0 0 chr17 10956196 10956232 -84316419 + (CAA)n Simple_repeat Simple_repeat 2 37 0 5 668 3710 281 38 36 chr17 10957375 10958751 -84313900 + Lx7 LINE L1 5995 7372 -324 5 668 22 56 0 0 chr17 10958793 10958829 -84313822 + AT_rich Low_complexity Low_complexity 1 36 0 5 668 423 0 0 0 chr17 10961035 10961082 -84311569 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 668 318 339 0 34 chr17 10961225 10961344 -84311307 + PB1D10 SINE Alu 3 117 0 5 668 216 0 0 0 chr17 10963248 10963272 -84309379 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 668 203 204 0 18 chr17 10965992 10966047 -84306604 + GA-rich Low_complexity Low_complexity 3 56 0 6 668 710 274 65 0 chr17 10966969 10967155 -84305496 - MER3 DNA MER1_type -7 202 5 6 668 1398 68 15 54 chr17 10968195 10968398 -84304253 - B2_Mm2 SINE B2 0 195 1 6 668 21 71 0 0 chr17 10970384 10970426 -84302225 + AT_rich Low_complexity Low_complexity 1 42 0 6 668 325 284 49 14 chr17 10971741 10971884 -84300767 - L1MD2 LINE L1 -15 6618 6471 6 668 355 242 88 29 chr17 10972005 10972175 -84300476 - L1MD2 LINE L1 -442 6308 6129 6 668 233 270 90 0 chr17 10972370 10972481 -84300170 - L1MD2 LINE L1 -2650 3887 3767 6 668 285 304 40 0 chr17 10972671 10972796 -84299855 - L1MD2 LINE L1 -3049 3488 3359 6 668 343 315 0 47 chr17 10972882 10973032 -84299619 - L1MD2 LINE L1 -3369 3168 3026 6 668 1436 248 38 19 chr17 10973033 10973403 -84299248 - MTD LTR MaLR 0 419 43 6 668 286 261 90 0 chr17 10973430 10973541 -84299110 - L1MD2 LINE L1 -3508 3029 2909 6 668 757 282 91 87 chr17 10973843 10974605 -84298046 - L1MD2 LINE L1 -4185 2448 1684 6 668 363 282 127 89 chr17 10974758 10974989 -84297662 - L1MD2 LINE L1 -5174 1459 1210 6 668 504 261 231 14 chr17 10975275 10975496 -84297155 + RMER15 LTR ERVL 307 575 0 6 668 195 42 0 0 chr17 10977795 10977819 -84294832 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 668 396 59 0 0 chr17 10978081 10978132 -84294519 + (CATAA)n Simple_repeat Simple_repeat 2 52 0 6 668 186 415 24 0 chr17 10979127 10979250 -84293401 + L2 LINE L2 2738 2863 -556 6 668 1268 87 40 0 chr17 10980545 10980718 -84291933 + B2_Mm2 SINE B2 2 181 -14 6 668 293 309 11 67 chr17 10980735 10980825 -84291826 + PB1D10 SINE Alu 27 111 -6 6 668 295 197 12 123 chr17 10980897 10980978 -84291673 + B4A SINE B4 8 79 -213 6 668 249 255 0 101 chr17 10981031 10981140 -84291511 + B4A SINE B4 194 291 -1 6 668 279 0 0 0 chr17 10981140 10981171 -84291480 + (GA)n Simple_repeat Simple_repeat 2 32 0 6 668 21 36 0 0 chr17 10981564 10981592 -84291059 + AT_rich Low_complexity Low_complexity 1 28 0 6 668 237 65 0 0 chr17 10984632 10984663 -84287988 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 6 668 724 176 8 0 chr17 10984913 10985032 -84287619 + B1_Mur4 SINE Alu 2 121 -29 6 668 465 19 0 0 chr17 10985039 10985093 -84287558 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 668 228 67 0 0 chr17 10985093 10985122 -84287529 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 668 356 220 0 0 chr17 10985672 10985731 -84286920 + URR1B DNA MER1_type 1 59 -166 6 668 191 337 64 149 chr17 10985739 10986021 -84286630 + L2 LINE L2 266 523 -2896 6 668 457 322 67 5 chr17 10986464 10986673 -84285978 + L2 LINE L2 1356 1577 -1842 6 668 197 365 14 55 chr17 10987328 10987473 -84285178 - L2a LINE L2 -31 3395 3257 6 668 456 19 0 0 chr17 10988964 10989017 -84283634 + (TA)n Simple_repeat Simple_repeat 1 53 0 6 668 238 247 82 0 chr17 10989674 10989771 -84282880 + L1MC1 LINE L1 5304 5408 -2587 6 668 892 271 143 41 chr17 10989854 10990415 -84282236 + L1MC1 LINE L1 5623 6240 -93 6 668 25 0 0 0 chr17 10990478 10990503 -84282148 + AT_rich Low_complexity Low_complexity 1 25 0 6 668 401 345 23 46 chr17 10991663 10991882 -84280769 - MLT1J1 LTR MaLR -230 214 1 6 668 304 280 128 103 chr17 10991910 10992113 -84280538 + ID_B1 SINE B4 8 215 -9 6 668 270 0 0 0 chr17 10992147 10992177 -84280474 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 668 453 364 74 3 chr17 10992825 10993109 -84279542 - MLT1J1-int LTR MaLR -926 461 158 6 668 3129 72 118 0 chr17 10994949 10995381 -84277270 - L1_Mus3 LINE L1 -7 6631 6149 6 668 4332 70 9 0 chr17 10995383 10996286 -84276365 + L1_Mus3 LINE L1 5225 6142 -496 6 668 924 156 0 0 chr17 10996979 10997159 -84275492 + (TA)n Simple_repeat Simple_repeat 1 180 0 6 668 350 265 82 31 chr17 10997214 10997506 -84275145 - L1MEc LINE L1 -4201 2199 1893 6 668 267 275 107 75 chr17 10998104 10998701 -84273950 - L1MEc LINE L1 -5240 1160 545 6 668 386 369 70 27 chr17 10998850 10999109 -84273542 - L1MEc LINE L1 -6117 283 14 6 668 1231 188 14 0 chr17 10999188 10999411 -84273240 - URR1A DNA MER1_type 0 226 1 6 668 237 33 0 0 chr17 11000999 11001029 -84271622 + (TTG)n Simple_repeat Simple_repeat 2 31 0 1 668 219 133 44 0 chr17 11001873 11001918 -84270733 + A-rich Low_complexity Low_complexity 3 49 0 2 668 886 259 59 3 chr17 11002620 11002926 -84269725 + L1MA8 LINE L1 5574 5896 -395 3 668 260 348 85 33 chr17 11006171 11006382 -84266269 - MIR SINE MIR -31 231 10 4 668 844 277 41 3 chr17 11007586 11007879 -84264772 + L1_Mur3 LINE L1 2445 2748 -3132 5 668 252 281 78 0 chr17 11007879 11008007 -84264644 + L1MA7 LINE L1 2872 3009 -3134 6 668 3616 128 104 2 chr17 11008007 11008632 -84264019 + Lx4A LINE L1 5959 6647 -411 7 668 257 327 62 19 chr17 11008921 11009083 -84263568 + L1M3b LINE L1 237 405 -5876 8 668 309 260 20 59 chr17 11009386 11009488 -84263163 + L1MA7 LINE L1 4971 5068 -1075 6 668 681 268 60 53 chr17 11009699 11009901 -84262750 + B4A SINE B4 1 214 -78 9 668 255 31 0 0 chr17 11009901 11009933 -84262718 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1 668 681 268 60 53 chr17 11009933 11010014 -84262637 + B4A SINE B4 215 286 -6 9 669 388 296 99 55 chr17 11010061 11010443 -84262208 + L1MA7 LINE L1 5318 5716 -575 6 669 493 275 70 19 chr17 11010454 11010710 -84261941 + L1MA7 LINE L1 5837 6105 -186 6 669 342 0 0 0 chr17 11012865 11012903 -84259748 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 669 236 148 37 0 chr17 11013246 11013300 -84259351 + (TTTG)n Simple_repeat Simple_repeat 1 56 0 1 669 595 205 0 41 chr17 11013300 11013422 -84259229 - PB1D9 SINE Alu 0 120 4 1 669 3415 33 2 0 chr17 11013422 11013815 -84258836 + MTA_Mm LTR MaLR 3 396 0 1 669 504 117 0 0 chr17 11013825 11013902 -84258749 + (TG)n Simple_repeat Simple_repeat 1 77 0 1 669 202 233 23 0 chr17 11013902 11013945 -84258706 + (TATG)n Simple_repeat Simple_repeat 4 47 0 1 669 317 291 132 11 chr17 11014729 11014903 -84257748 + L1M5 LINE L1 5619 5813 -366 1 669 750 181 0 0 chr17 11015020 11015164 -84257487 + (TA)n Simple_repeat Simple_repeat 1 144 0 1 669 332 248 61 17 chr17 11015470 11015585 -84257066 + PB1D9 SINE Alu 1 120 0 1 669 22 0 0 0 chr17 11016529 11016551 -84256100 + AT_rich Low_complexity Low_complexity 1 22 0 2 669 1122 255 112 40 chr17 11017853 11018281 -84254370 + Lx8 LINE L1 6792 7250 -223 2 669 475 259 20 20 chr17 11018782 11018932 -84253719 - RCHARR1 DNA MER1_type 0 974 825 2 669 476 256 5 135 chr17 11018949 11019157 -84253494 + L1VL1 LINE L1 138 318 -6104 2 669 19192 102 4 10 chr17 11019172 11022885 -84249766 + L1_Mus2 LINE L1 2826 6514 -52 2 669 2223 282 97 30 chr17 11022885 11023745 -84248906 - RCHARR1 DNA MER1_type -57 917 1 2 669 29 47 0 0 chr17 11024209 11024252 -84248399 + AT_rich Low_complexity Low_complexity 1 43 0 2 669 225 0 0 0 chr17 11024522 11024547 -84248104 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 669 245 209 0 15 chr17 11024593 11024661 -84247990 + GA-rich Low_complexity Low_complexity 4 70 0 2 669 279 214 11 0 chr17 11024661 11024750 -84247901 + Lx7 LINE L1 7578 7667 -29 2 669 932 267 0 0 chr17 11025437 11025643 -84247008 + B3 SINE B2 1 206 -10 3 669 629 58 12 0 chr17 11025716 11025802 -84246849 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 3 669 662 243 14 29 chr17 11025992 11026132 -84246519 + B1_Mur1 SINE Alu 3 140 -9 3 669 286 323 147 39 chr17 11026629 11026861 -84245790 - MTD LTR MaLR -13 406 150 3 669 237 264 23 11 chr17 11026943 11027031 -84245620 + L1M5 LINE L1 5825 5913 -260 3 669 228 290 5 111 chr17 11027153 11027343 -84245308 - Lx8 LINE L1 -2 7471 7302 3 669 21 0 0 0 chr17 11027517 11027538 -84245113 + AT_rich Low_complexity Low_complexity 1 21 0 3 669 182 62 31 0 chr17 11027856 11027888 -84244763 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 3 669 290 26 26 0 chr17 11028181 11028220 -84244431 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 3 669 617 0 14 0 chr17 11028220 11028293 -84244358 + (GGAAA)n Simple_repeat Simple_repeat 2 75 0 3 669 1359 234 129 18 chr17 11029543 11030000 -84242651 + Lx8 LINE L1 6961 7468 -5 4 669 795 39 0 0 chr17 11030674 11030777 -84241874 + (TG)n Simple_repeat Simple_repeat 2 104 0 4 669 28 0 0 0 chr17 11033525 11033553 -84239098 + GC_rich Low_complexity Low_complexity 1 28 0 4 669 26 30 0 0 chr17 11035731 11035764 -84236887 + AT_rich Low_complexity Low_complexity 1 33 0 4 669 22 35 0 0 chr17 11036002 11036031 -84236620 + AT_rich Low_complexity Low_complexity 1 29 0 4 669 184 382 0 13 chr17 11036373 11036450 -84236201 - L2a LINE L2 -25 3401 3326 4 669 189 0 0 0 chr17 11036897 11036918 -84235733 + (GGAA)n Simple_repeat Simple_repeat 4 24 0 4 669 846 202 0 0 chr17 11036920 11037098 -84235553 + GA-rich Low_complexity Low_complexity 3 180 0 4 669 441 95 0 0 chr17 11037634 11037697 -84234954 + (TCTCCC)n Simple_repeat Simple_repeat 5 67 0 4 669 285 128 0 0 chr17 11038234 11038281 -84234370 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 669 1728 141 85 7 chr17 11038298 11038592 -84234059 - MTC LTR MaLR -8 413 97 5 669 475 197 90 0 chr17 11038595 11038717 -84233934 + RMER17C-int LTR ERVK 3106 3238 0 5 669 489 34 0 0 chr17 11039009 11039068 -84233583 + (GA)n Simple_repeat Simple_repeat 2 60 0 5 669 370 237 10 70 chr17 11039084 11039184 -84233467 - MTC LTR MaLR -327 94 1 5 669 2170 127 167 24 chr17 11039548 11040039 -84232612 - RLTR31_Mm LTR ERVK 0 561 1 5 669 387 322 89 62 chr17 11040221 11040446 -84232205 + B4A SINE B4 1 231 -61 5 669 180 176 0 0 chr17 11040511 11040545 -84232106 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 669 1853 177 225 5 chr17 11041001 11041415 -84231236 - RLTR16 LTR ERVK 0 505 1 5 669 238 309 12 23 chr17 11042253 11042339 -84230312 + RSINE1 SINE B4 2 86 -79 5 669 323 308 71 45 chr17 11042322 11042434 -84230217 + B4A SINE B4 84 198 -94 5 669 195 42 0 0 chr17 11042462 11042486 -84230165 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 669 384 82 0 0 chr17 11043724 11043785 -84228866 + (CAGA)n Simple_repeat Simple_repeat 2 62 0 6 669 1386 218 125 14 chr17 11044699 11045067 -84227584 + MTD LTR MaLR 10 418 -1 6 669 22 0 0 0 chr17 11045212 11045234 -84227417 + AT_rich Low_complexity Low_complexity 1 22 0 6 669 365 286 62 0 chr17 11045449 11045561 -84227090 + PB1D7 SINE Alu 1 119 -1 6 669 2618 81 20 38 chr17 11045905 11046301 -84226350 + L1Md_F2 LINE L1 6191 6579 -3 6 669 279 0 0 0 chr17 11046477 11046508 -84226143 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6 669 203 138 0 0 chr17 11047418 11047447 -84225204 + (TTTCC)n Simple_repeat Simple_repeat 2 30 0 6 669 462 36 0 0 chr17 11048134 11048190 -84224461 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 669 228 283 0 0 chr17 11048228 11048288 -84224363 + (TG)n Simple_repeat Simple_repeat 1 60 0 6 669 766 280 98 43 chr17 11048288 11048528 -84224123 - B4 SINE B4 0 292 38 6 669 405 0 0 0 chr17 11048528 11048573 -84224078 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 669 766 280 98 43 chr17 11048573 11048608 -84224043 - B4 SINE B4 -255 37 2 6 669 972 231 23 14 chr17 11050883 11051098 -84221553 - ORR1C2 LTR MaLR 0 384 168 7 669 268 215 7 219 chr17 11051124 11051261 -84221390 - ORR1C2 LTR MaLR -191 193 86 7 669 3038 268 52 8 chr17 11051264 11051939 -84220712 - Lx6 LINE L1 -12 7448 6755 7 669 191 88 29 0 chr17 11051939 11051973 -84220678 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 7 669 3038 268 52 8 chr17 11051973 11052098 -84220553 - Lx6 LINE L1 -706 6754 6613 7 669 475 161 86 0 chr17 11052098 11052191 -84220460 - ORR1C2 LTR MaLR -273 101 1 7 669 405 0 0 0 chr17 11053291 11053336 -84219315 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 669 877 267 126 0 chr17 11053354 11053601 -84219050 - B4A SINE B4 -12 280 3 7 669 8227 70 1 12 chr17 11054975 11056784 -84215867 - L1_Mus1 LINE L1 -1 6566 4777 7 669 1521 114 0 4 chr17 11056762 11056990 -84215661 + L1_Mus1 LINE L1 4567 4793 -1090 7 669 22 94 0 0 chr17 11057350 11057414 -84215237 + AT_rich Low_complexity Low_complexity 1 64 0 7 669 24 53 0 0 chr17 11057644 11057682 -84214969 + AT_rich Low_complexity Low_complexity 1 38 0 7 669 441 0 0 0 chr17 11057917 11057966 -84214685 + (T)n Simple_repeat Simple_repeat 1 49 0 7 669 1005 273 38 19 chr17 11057968 11058282 -84214369 - Lx8 LINE L1 -769 6704 6385 7 669 188 315 21 53 chr17 11058469 11058563 -84214088 - L3b LINE CR1 -277 205 115 8 669 602 254 21 14 chr17 11058762 11058902 -84213749 - Lx8 LINE L1 -1074 6399 6259 7 669 573 237 46 0 chr17 11061642 11061773 -84210878 + B1_Mur2 SINE Alu 1 137 -12 8 669 3224 38 5 15 chr17 11061774 11062174 -84210477 - MTA_Mm LTR MaLR 0 396 1 8 669 350 255 112 0 chr17 11062467 11062565 -84210086 + PB1D7 SINE Alu 3 111 -9 8 669 459 35 0 0 chr17 11063049 11063106 -84209545 + (TC)n Simple_repeat Simple_repeat 1 57 0 8 669 21 57 0 0 chr17 11064031 11064066 -84208585 + AT_rich Low_complexity Low_complexity 1 35 0 8 669 294 277 98 57 chr17 11064200 11064430 -84208221 + MIR SINE MIR 22 264 -4 8 669 634 316 71 40 chr17 11067450 11067776 -84204875 + MLT1A LTR MaLR 1 336 -38 8 669 792 252 65 30 chr17 11067794 11068156 -84204495 + MTE2b LTR MaLR 2 379 0 8 669 8567 66 7 4 chr17 11068383 11070209 -84202442 + L1_Mus1 LINE L1 4733 6564 -3 8 669 2350 267 82 17 chr17 11070245 11070903 -84201748 - Lx8 LINE L1 -582 6891 6191 9 669 279 306 114 42 chr17 11071086 11071253 -84201398 - MIRb SINE MIR -15 253 75 9 669 21 0 0 0 chr17 11072397 11072418 -84200233 + AT_rich Low_complexity Low_complexity 1 21 0 9 669 307 321 51 7 chr17 11073084 11073222 -84199429 + RSINE1 SINE B4 3 146 -19 9 669 180 255 36 18 chr17 11074089 11074145 -84198506 + L4 LINE RTE 1762 1818 -211 9 669 358 279 147 12 chr17 11074389 11074552 -84198099 - Lx8 LINE L1 -12 7461 7277 9 669 1266 287 43 35 chr17 11074549 11075061 -84197590 + Lx8 LINE L1 6744 7259 -214 9 669 319 352 105 27 chr17 11075731 11076026 -84196625 - L1M5 LINE L1 -1386 4760 4443 9 669 25 0 0 0 chr17 11076551 11076576 -84196075 + AT_rich Low_complexity Low_complexity 1 25 0 9 669 10070 110 12 3 chr17 11076576 11078012 -84194639 - Lx4A LINE L1 -3 7055 5608 9 669 22 35 0 0 chr17 11078878 11078907 -84193744 + AT_rich Low_complexity Low_complexity 1 29 0 9 669 594 103 11 2 chr17 11079455 11079552 -84193099 + B1_Mus2 SINE Alu 1 102 -15 1 669 2583 77 30 10 chr17 11079851 11080246 -84192405 - Lx2A LINE L1 -1 7007 6605 1 669 2392 135 20 10 chr17 11080249 11080647 -84192004 - Lx4A LINE L1 -1538 4339 3938 9 669 362 350 6 48 chr17 11082090 11082255 -84190396 - B4A SINE B4 -118 174 17 1 669 415 318 44 68 chr17 11082548 11082754 -84189897 - MIR SINE MIR 0 262 62 1 669 1217 41 0 7 chr17 11082823 11082972 -84189679 + B1_Mus1 SINE Alu 1 148 0 1 669 1065 183 35 0 chr17 11082987 11083184 -84189467 - B3 SINE B2 -1 215 12 1 669 22 35 0 0 chr17 11085152 11085181 -84187470 + AT_rich Low_complexity Low_complexity 1 29 0 1 669 544 230 122 0 chr17 11085182 11085321 -84187330 - RSINE1 SINE B4 -6 159 4 1 669 8288 32 1 2 chr17 11085481 11086806 -84185845 - L1Md_F2 LINE L1 -1 6581 5258 1 669 16370 42 0 1 chr17 11086789 11088809 -84183842 + L1Md_F2 LINE L1 3216 5234 -649 1 669 551 273 81 81 chr17 11088812 11089023 -84183628 - B3A SINE B2 -5 211 1 1 669 357 24 0 0 chr17 11090336 11090378 -84182273 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 669 480 303 37 12 chr17 11090390 11090566 -84182085 - B3A SINE B2 -36 180 1 1 669 27 0 0 0 chr17 11090868 11090895 -84181756 + AT_rich Low_complexity Low_complexity 1 27 0 1 669 627 39 0 0 chr17 11092349 11092427 -84180224 + (TC)n Simple_repeat Simple_repeat 2 79 0 1 669 471 18 0 0 chr17 11094345 11094401 -84178250 + (GA)n Simple_repeat Simple_repeat 2 57 0 1 669 212 0 36 0 chr17 11094474 11094502 -84178149 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1 669 1151 244 160 6 chr17 11094862 11095200 -84177451 - RLTR18B LTR ERVK 0 512 123 1 669 1097 215 5 0 chr17 11095210 11095405 -84177246 - RLTR18B LTR ERVK -316 196 1 1 669 1424 231 52 22 chr17 11096653 11097060 -84175591 + MTD LTR MaLR 1 419 0 1 669 1082 276 68 21 chr17 11099331 11099657 -84172994 + MTD LTR MaLR 2 342 -77 1 669 507 286 109 21 chr17 11099658 11099851 -84172800 + MER20 DNA MER1_type 2 211 -8 1 669 696 222 0 0 chr17 11100446 11100626 -84172025 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 669 235 343 0 28 chr17 11100692 11100704 -84171947 - ID_B1 SINE B4 -75 149 82 1 669 251 304 0 35 chr17 11100704 11100762 -84171889 - B1F1 SINE Alu -93 56 1 1 669 30 77 0 0 chr17 11101527 11101592 -84171059 + AT_rich Low_complexity Low_complexity 1 65 0 1 669 25 31 0 0 chr17 11101625 11101657 -84170994 + AT_rich Low_complexity Low_complexity 1 32 0 1 669 285 238 15 31 chr17 11101857 11101922 -84170729 + ID_B1 SINE B4 156 219 -5 1 669 9575 125 14 19 chr17 11102472 11105189 -84167462 + Lx2 LINE L1 4305 6997 0 1 669 256 196 0 0 chr17 11105433 11105484 -84167167 - 4.5SRNA scRNA scRNA -38 56 6 1 669 799 150 40 46 chr17 11106013 11106188 -84166463 - Lx7 LINE L1 0 7696 7523 1 669 572 272 42 42 chr17 11106885 11107150 -84165501 + LTR37B LTR ERV1 198 462 -6 1 669 427 362 70 14 chr17 11108269 11108482 -84164169 + B4A SINE B4 68 292 0 1 669 225 209 0 0 chr17 11108506 11108549 -84164102 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 669 203 175 0 0 chr17 11109066 11109106 -84163545 + T-rich Low_complexity Low_complexity 3 42 0 1 669 215 351 13 0 chr17 11110413 11110490 -84162161 - PB1D10 SINE Alu -39 78 1 1 669 532 279 14 14 chr17 11110490 11110571 -84162080 - B4 SINE B4 -207 85 5 1 669 1173 101 0 12 chr17 11110663 11110834 -84161817 + B2_Mm2 SINE B2 1 169 -26 1 669 505 286 137 30 chr17 11112699 11112962 -84159689 - Lx8 LINE L1 -101 7372 7082 1 669 3043 54 12 60 chr17 11113008 11113424 -84159227 + MTA_Mm LTR MaLR 1 396 0 1 669 8899 50 4 0 chr17 11113424 11114518 -84158133 + MTA_Mm-int LTR MaLR 1 1098 0 1 669 3364 33 5 0 chr17 11114518 11114912 -84157739 + MTA_Mm LTR MaLR 1 396 0 1 669 801 331 14 45 chr17 11115497 11115785 -84156866 + B4 SINE B4 4 282 -10 1 669 240 35 0 0 chr17 11115785 11115814 -84156837 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 669 476 263 44 0 chr17 11117484 11117598 -84155053 + B1F SINE Alu 2 120 -29 1 669 895 256 25 36 chr17 11118099 11118375 -84154276 + B4A SINE B4 2 274 -18 1 669 2784 171 38 28 chr17 11119568 11120004 -84152647 + RLTR20C LTR ERVK 1 444 -90 1 669 433 0 35 0 chr17 11120004 11120061 -84152590 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 669 2784 171 38 28 chr17 11120061 11120153 -84152498 + RLTR20C LTR ERVK 445 534 0 1 669 249 109 0 0 chr17 11121072 11121118 -84151533 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 1 669 1215 62 0 0 chr17 11121121 11121267 -84151384 - B1_Mm SINE Alu 0 147 2 1 669 531 258 75 0 chr17 11121619 11121832 -84150819 + L1MA7 LINE L1 6047 6275 -16 1 669 228 182 0 0 chr17 11122734 11122778 -84149873 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 669 200 342 13 0 chr17 11123741 11123817 -84148834 + CT-rich Low_complexity Low_complexity 1 77 0 1 669 228 274 0 0 chr17 11123748 11123799 -84148852 + C-rich Low_complexity Low_complexity 2 52 0 1 669 252 0 0 0 chr17 11124613 11124641 -84148010 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 669 821 168 21 7 chr17 11125831 11125975 -84146676 - B1_Mus1 SINE Alu 0 148 3 1 669 266 0 29 0 chr17 11126167 11126201 -84146450 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 669 3176 104 39 2 chr17 11126204 11126667 -84145984 - Lx3A LINE L1 -17 6964 6485 1 669 2826 80 111 27 chr17 11126667 11127155 -84145496 + Lx3A LINE L1 5973 6501 -480 1 669 240 356 20 0 chr17 11127212 11127313 -84145338 + MIR SINE MIR 31 133 -129 1 669 753 102 9 0 chr17 11128051 11128159 -84144492 + RMER6B LTR ERVK 351 459 -2 1 669 814 96 17 0 chr17 11128265 11128380 -84144271 - RMER6B LTR ERVK -344 117 1 1 669 300 284 93 102 chr17 11131047 11131263 -84141388 + B4 SINE B4 79 292 0 1 669 348 24 0 0 chr17 11131870 11131911 -84140740 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 669 34 24 0 0 chr17 11133552 11133593 -84139058 + AT_rich Low_complexity Low_complexity 1 41 0 1 669 1170 63 0 0 chr17 11135145 11135287 -84137364 - B1_Mus1 SINE Alu -6 142 1 1 669 1778 198 16 13 chr17 11136094 11136477 -84136174 - ORR1C2 LTR MaLR 0 384 1 1 669 587 270 126 3 chr17 11136543 11136837 -84135814 + Charlie2b DNA MER1_type 2350 2679 -103 1 669 783 161 299 0 chr17 11137181 11137355 -84135296 - URR1A DNA MER1_type 0 226 1 1 669 21 0 0 0 chr17 11138122 11138143 -84134508 + AT_rich Low_complexity Low_complexity 1 21 0 1 669 308 355 0 38 chr17 11139937 11140095 -84132556 + (CA)n Simple_repeat Simple_repeat 1 152 0 1 669 378 0 0 0 chr17 11140829 11140871 -84131780 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 83 8449 35 0 0 chr17 11141066 11142062 -84130589 + L1Md_T LINE L1 5587 6582 0 1 670 32311 45 35 16 chr17 11144045 11149074 -84123577 + L1Md_T LINE L1 466 5586 -297 1 670 8439 32 1 3 chr17 11149074 11150072 -84122579 + L1Md_T LINE L1 5587 6582 0 1 670 261 0 0 0 chr17 11151219 11151248 -84121403 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 670 469 333 41 10 chr17 11152520 11152714 -84119937 - MLT1A1 LTR MaLR -30 378 179 1 670 658 105 29 29 chr17 11153201 11153338 -84119313 + CT-rich Low_complexity Low_complexity 4 140 0 1 670 21 0 0 0 chr17 11153370 11153391 -84119260 + AT_rich Low_complexity Low_complexity 1 21 0 1 670 229 168 0 104 chr17 11153451 11153557 -84119094 - Lx7 LINE L1 -110 7586 7492 1 670 457 262 179 13 chr17 11153574 11153725 -84118926 - Lx6 LINE L1 -290 7170 6995 1 670 297 0 0 0 chr17 11154161 11154194 -84118457 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 670 391 331 31 16 chr17 11154195 11154324 -84118327 - RSINE1 SINE B4 -33 132 2 1 670 246 265 83 25 chr17 11155619 11155739 -84116912 - L2c LINE L2 -43 3344 3218 1 670 500 326 55 43 chr17 11155973 11156300 -84116351 - MER121 Unknown Unknown -81 331 1 1 670 22 0 0 0 chr17 11156452 11156474 -84116177 + AT_rich Low_complexity Low_complexity 1 22 0 1 670 21 0 0 0 chr17 11157048 11157069 -84115582 + AT_rich Low_complexity Low_complexity 1 21 0 1 670 685 279 14 117 chr17 11157875 11158098 -84114553 + B3A SINE B2 1 200 -16 1 670 522 0 0 0 chr17 11158098 11158156 -84114495 + (GA)n Simple_repeat Simple_repeat 2 59 0 1 670 656 12 0 12 chr17 11159200 11159282 -84113369 + (TTTC)n Simple_repeat Simple_repeat 1 81 0 1 670 761 219 0 0 chr17 11159282 11159419 -84113232 - B1_Mur2 SINE Alu -12 137 1 1 670 27478 30 0 1 chr17 11159880 11164012 -84108639 - L1Md_T LINE L1 0 6585 2459 1 670 8214 8 0 0 chr17 11164022 11165402 -84107249 - L1Md_A LINE L1 -32 6550 5171 1 670 8814 68 2 8 chr17 11165400 11167578 -84105073 - L1Md_T LINE L1 -3415 2471 211 1 670 256 237 110 30 chr17 11169991 11170091 -84102560 - PB1D10 SINE Alu -7 110 3 1 670 560 205 6 0 chr17 11170164 11170325 -84102326 + (CA)n Simple_repeat Simple_repeat 2 163 0 1 670 441 0 0 0 chr17 11170325 11170374 -84102277 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 670 27 29 0 0 chr17 11170972 11171006 -84101645 + AT_rich Low_complexity Low_complexity 1 34 0 1 670 223 333 49 12 chr17 11171018 11171100 -84101551 - B3A SINE B2 -33 165 81 1 670 315 327 3 3 chr17 11171105 11171233 -84101418 - B3A SINE B2 -56 142 13 1 670 1426 162 168 40 chr17 11172212 11172533 -84100118 + RLTR18 LTR ERVK 255 616 0 1 670 669 263 45 6 chr17 11172578 11172754 -84099897 - URR1A DNA MER1_type -43 183 1 1 670 880 302 82 16 chr17 11172965 11173332 -84099319 + L2 LINE L2 2143 2533 -886 1 670 236 298 35 35 chr17 11175049 11175136 -84097515 + LTR16C LTR ERVL 164 250 -239 1 670 238 314 94 9 chr17 11175960 11176066 -84096585 - MLT1A0 LTR MaLR -197 168 54 1 670 244 328 49 66 chr17 11176501 11176684 -84095967 + MIRc SINE MIR 23 202 -66 1 670 25 0 0 0 chr17 11178066 11178091 -84094560 + AT_rich Low_complexity Low_complexity 1 25 0 2 670 224 191 21 0 chr17 11178689 11178736 -84093915 + MIR SINE MIR 78 125 -137 2 670 237 65 0 0 chr17 11180492 11180523 -84092128 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 670 34092 34 0 0 chr17 11180832 11185928 -84086723 - L1Md_T LINE L1 0 6582 1487 2 670 459 92 74 16 chr17 11186596 11186718 -84085933 + GA-rich Low_complexity Low_complexity 2 130 0 2 670 845 158 17 6 chr17 11186702 11186880 -84085771 + G-rich Low_complexity Low_complexity 1 180 0 2 670 315 164 0 0 chr17 11188517 11188578 -84084073 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 670 25 51 0 0 chr17 11189575 11189614 -84083037 + AT_rich Low_complexity Low_complexity 1 39 0 2 670 512 232 111 18 chr17 11189753 11189924 -84082727 - MT2A LTR ERVL 0 533 347 2 670 840 248 62 5 chr17 11189911 11189953 -84082698 - MT2A LTR ERVL -310 223 180 2 670 861 38 0 0 chr17 11189953 11190058 -84082593 + (GA)n Simple_repeat Simple_repeat 2 106 0 2 670 840 248 62 5 chr17 11190058 11190226 -84082425 - MT2A LTR ERVL -354 179 3 2 670 26665 80 72 47 chr17 11191662 11197693 -84074958 - L1Md_F2 LINE L1 -12 6570 381 2 670 181 372 14 55 chr17 11197940 11198085 -84074566 - L2a LINE L2 -21 3405 3267 2 670 182 135 0 37 chr17 11198403 11198457 -84074194 + A-rich Low_complexity Low_complexity 2 53 0 2 670 200 274 65 52 chr17 11198467 11198544 -84074107 - MIRb SINE MIR -140 128 51 2 670 225 0 0 0 chr17 11200907 11200932 -84071719 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2 670 302 87 21 21 chr17 11201552 11201568 -84071083 - HAL1-3A_ME LINE L1 -835 2023 2007 2 670 1086 67 0 43 chr17 11201568 11201756 -84070895 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 670 302 87 21 21 chr17 11201756 11201786 -84070865 - HAL1-3A_ME LINE L1 -852 2006 1977 2 670 930 113 20 10 chr17 11201786 11202093 -84070558 + (TG)n Simple_repeat Simple_repeat 1 310 0 2 670 275 154 0 71 chr17 11202208 11202278 -84070373 + A-rich Low_complexity Low_complexity 1 65 0 2 670 495 246 46 31 chr17 11203511 11203641 -84069010 - MER5B DNA MER1_type 0 178 47 2 670 744 166 0 0 chr17 11203827 11203966 -84068685 + (CA)n Simple_repeat Simple_repeat 2 140 0 2 670 1050 144 0 0 chr17 11203980 11204160 -84068491 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 670 25 51 0 0 chr17 11204787 11204826 -84067825 + AT_rich Low_complexity Low_complexity 1 39 0 2 670 1206 61 0 0 chr17 11205305 11205452 -84067199 + B1_Mm SINE Alu 1 147 0 2 670 591 228 99 40 chr17 11205626 11205827 -84066824 + B3 SINE B2 4 216 0 2 670 258 160 0 0 chr17 11205944 11205994 -84066657 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 670 783 120 22 17 chr17 11206001 11206179 -84066472 + GA-rich Low_complexity Low_complexity 2 180 0 2 670 29 28 0 0 chr17 11206659 11206695 -84065956 + AT_rich Low_complexity Low_complexity 1 36 0 2 670 1242 40 0 0 chr17 11206777 11206925 -84065726 + B1_Mus1 SINE Alu 1 148 0 2 670 227 312 27 18 chr17 11207107 11207218 -84065433 + Charlie22a DNA MER1_type 77 188 -303 2 670 302 333 45 0 chr17 11207337 11207448 -84065203 - PB1D7 SINE Alu -2 118 3 2 670 180 111 0 0 chr17 11208142 11208169 -84064482 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 670 669 158 0 0 chr17 11209617 11209737 -84062914 + (TG)n Simple_repeat Simple_repeat 1 120 0 2 670 186 393 40 16 chr17 11211195 11211319 -84061332 - L2b LINE L2 -1 3374 3248 2 670 445 288 21 21 chr17 11212301 11212443 -84060208 - MER5A DNA MER1_type -41 148 7 2 670 623 280 32 6 chr17 11212951 11213109 -84059542 + B3 SINE B2 46 207 -9 2 670 230 271 127 14 chr17 11213776 11213847 -84058804 - ID4 SINE ID -3 80 2 2 670 470 265 40 66 chr17 11213856 11214040 -84058611 - B1F1 SINE Alu -2 147 5 2 670 1166 56 0 0 chr17 11215029 11215172 -84057479 + B1_Mus2 SINE Alu 2 144 -3 2 670 278 26 0 25 chr17 11215172 11215212 -84057439 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 2 670 222 220 0 0 chr17 11215369 11215428 -84057223 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 670 803 64 0 9 chr17 11217632 11217743 -84054908 + (TTTC)n Simple_repeat Simple_repeat 2 111 0 2 670 308 176 147 0 chr17 11218858 11218926 -84053725 + ID4 SINE ID 4 81 -2 2 670 215 395 0 8 chr17 11220056 11220181 -84052470 - MIRb SINE MIR -40 228 105 2 670 418 160 32 36 chr17 11220596 11220849 -84051802 + (CAGAGA)n Simple_repeat Simple_repeat 1 251 0 2 670 1003 212 50 0 chr17 11222298 11222496 -84050155 + B3 SINE B2 1 208 -8 2 670 189 70 44 44 chr17 11222922 11222967 -84049684 + GA-rich Low_complexity Low_complexity 4 48 0 2 670 639 295 29 29 chr17 11224511 11224752 -84047899 + MER2 DNA MER2_type 104 344 -1 2 670 404 247 12 12 chr17 11225311 11225393 -84047258 + ID4_ SINE ID 1 82 -1 2 670 308 83 0 20 chr17 11225774 11225823 -84046828 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 670 1031 309 67 9 chr17 11225896 11226242 -84046409 + MTE2b LTR MaLR 1 366 -13 2 670 21 36 0 0 chr17 11227406 11227434 -84045217 + AT_rich Low_complexity Low_complexity 1 28 0 2 670 289 340 43 0 chr17 11228438 11228579 -84044072 - Tigger15a DNA TcMar -74 641 495 2 670 1114 272 73 60 chr17 11228989 11229401 -84043250 - MTD LTR MaLR -36 383 1 2 670 233 308 0 0 chr17 11229426 11229491 -84043160 - Tigger10 DNA Tigger -575 1268 1204 2 670 253 246 15 58 chr17 11230769 11230864 -84041787 - B1F1 SINE Alu -17 100 9 2 670 1014 73 0 14 chr17 11231608 11231747 -84040904 + B1_Mm SINE Alu 10 146 -1 2 670 413 116 0 14 chr17 11231747 11231817 -84040834 + (GAAA)n Simple_repeat Simple_repeat 1 69 0 2 670 596 295 39 0 chr17 11232966 11233122 -84039529 + RSINE1 SINE B4 4 165 0 2 670 186 315 27 27 chr17 11235613 11235688 -84036963 - L3 LINE CR1 -251 4238 4164 2 670 426 121 0 0 chr17 11236011 11236077 -84036574 + (TTTC)n Simple_repeat Simple_repeat 2 67 0 2 670 512 107 50 13 chr17 11236077 11236188 -84036463 - B1_Mur1 SINE Alu 0 149 1 2 670 204 0 83 0 chr17 11237155 11237191 -84035460 + (GA)n Simple_repeat Simple_repeat 1 39 0 2 670 255 114 0 0 chr17 11239199 11239243 -84033408 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 670 923 365 52 4 chr17 11239305 11239800 -84032851 - Lx8 LINE L1 -113 7360 6842 2 670 707 187 51 116 chr17 11239798 11239945 -84032706 + Lx7 LINE L1 5677 5777 -1919 2 670 1197 204 34 0 chr17 11239945 11240151 -84032500 + B3 SINE B2 1 213 -3 2 670 707 217 13 163 chr17 11240151 11240319 -84032332 + Lx7 LINE L1 5778 5939 -1705 2 670 442 263 131 5 chr17 11241197 11241411 -84031240 + L1MB3 LINE L1 5940 6180 -3 2 670 21 0 0 0 chr17 11241592 11241613 -84031038 + AT_rich Low_complexity Low_complexity 1 21 0 2 670 5266 60 65 18 chr17 11243434 11244101 -84028550 - L1_Mus2 LINE L1 0 6566 5869 2 670 5387 106 17 0 chr17 11244101 11244865 -84027786 + L1_Mus2 LINE L1 5088 5864 -19 2 670 22 0 0 0 chr17 11245095 11245117 -84027534 + AT_rich Low_complexity Low_complexity 1 22 0 2 670 441 286 422 12 chr17 11245219 11245547 -84027104 - LTR40a LTR ERVL -54 465 3 2 670 345 24 0 0 chr17 11246011 11246053 -84026598 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 670 441 110 0 0 chr17 11246053 11246134 -84026517 + (CA)n Simple_repeat Simple_repeat 1 82 0 2 670 2228 220 70 6 chr17 11246379 11246881 -84025770 - RMER5 LTR ERV1 0 534 1 2 670 431 292 36 0 chr17 11247824 11247961 -84024690 - ID_B1 SINE B4 0 224 83 2 670 371 301 27 103 chr17 11247964 11248227 -84024424 - L1MB8 LINE L1 -118 6060 5818 2 670 226 178 40 40 chr17 11248311 11248387 -84024264 + (TG)n Simple_repeat Simple_repeat 1 76 0 2 670 600 285 68 23 chr17 11248576 11248856 -84023795 - L1MB8 LINE L1 -519 5793 5507 2 670 374 321 145 13 chr17 11248975 11249202 -84023449 - MIRb SINE MIR -11 257 1 2 670 273 291 81 0 chr17 11250051 11250137 -84022514 - Charlie2a DNA MER1_type 0 2861 2769 2 670 1185 63 14 0 chr17 11250206 11250349 -84022302 + B1_Mus1 SINE Alu 4 148 0 2 670 254 111 0 18 chr17 11250349 11250399 -84022252 + (CAAAC)n Simple_repeat Simple_repeat 1 49 0 2 670 398 324 29 0 chr17 11251108 11251247 -84021404 - B4A SINE B4 -148 144 2 2 670 208 102 41 0 chr17 11251253 11251302 -84021349 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 2 670 681 289 91 92 chr17 11251308 11252043 -84020608 - Charlie2a DNA MER1_type -624 2237 1504 2 670 214 265 73 0 chr17 11252128 11252264 -84020387 + (TGGA)n Simple_repeat Simple_repeat 3 148 0 2 670 263 331 62 8 chr17 11252783 11252911 -84019740 + MIRc SINE MIR 110 244 -24 2 670 284 280 46 9 chr17 11253122 11253230 -84019421 - MIR SINE MIR -16 246 135 2 670 228 374 21 8 chr17 11253985 11254228 -84018423 - L1MEf LINE L1 -5303 897 652 2 670 657 275 88 21 chr17 11254533 11254726 -84017925 - B3 SINE B2 -6 210 5 2 670 400 313 142 10 chr17 11254759 11255146 -84017505 - L1MC3 LINE L1 -133 7652 7215 2 670 307 259 68 77 chr17 11255444 11255561 -84017090 - RLTR14 LTR ERV1 -5 377 262 2 670 315 0 0 0 chr17 11255899 11255934 -84016717 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 670 266 0 0 29 chr17 11255934 11255968 -84016683 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 670 459 222 0 53 chr17 11256078 11256173 -84016478 - B3 SINE B2 -7 209 120 2 670 926 153 23 17 chr17 11256389 11256694 -84015957 + GA-rich Low_complexity Low_complexity 1 306 0 2 670 843 96 0 0 chr17 11258272 11258408 -84014243 + (TCTCC)n Simple_repeat Simple_repeat 1 136 0 2 670 628 248 26 40 chr17 11258949 11259100 -84013551 - B1_Mur2 SINE Alu 0 149 1 2 670 247 105 17 17 chr17 11259768 11259826 -84012825 + (TTTTG)n Simple_repeat Simple_repeat 3 60 0 2 670 21 0 0 0 chr17 11261328 11261349 -84011302 + AT_rich Low_complexity Low_complexity 1 21 0 2 670 498 251 170 68 chr17 11262441 11262706 -84009945 + B4 SINE B4 1 292 0 2 670 30 0 0 0 chr17 11263587 11263617 -84009034 + AT_rich Low_complexity Low_complexity 1 30 0 2 670 201 74 0 0 chr17 11263857 11263884 -84008767 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 670 1191 285 116 9 chr17 11263932 11264382 -84008269 - MLT2B4 LTR ERVL -58 498 1 3 670 1645 195 35 66 chr17 11264512 11264587 -84008064 - ORR1C2 LTR MaLR 0 384 315 3 670 1681 78 9 5 chr17 11264587 11264807 -84007844 + L1_Mus3 LINE L1 6411 6631 -7 3 670 1645 195 35 66 chr17 11264807 11265127 -84007524 - ORR1C2 LTR MaLR -70 314 1 3 670 222 260 0 0 chr17 11265215 11265288 -84007363 + (CA)n Simple_repeat Simple_repeat 2 74 0 3 670 674 221 64 0 chr17 11265793 11265933 -84006718 - B1_Mur2 SINE Alu 0 149 1 3 670 352 152 10 39 chr17 11266937 11267040 -84005611 + GA-rich Low_complexity Low_complexity 3 102 0 3 670 392 342 87 57 chr17 11267167 11267465 -84005186 + L1MDa LINE L1 89 395 -6238 3 670 201 161 0 0 chr17 11269478 11269509 -84003142 + (CATATA)n Simple_repeat Simple_repeat 5 35 0 3 670 191 333 0 15 chr17 11270337 11270404 -84002247 + MIR SINE MIR 124 189 -73 3 670 6115 195 71 19 chr17 11271228 11271491 -84001160 - Lx9 LINE L1 -43 7601 7313 3 670 261 0 0 0 chr17 11271491 11271520 -84001131 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 3 670 6115 195 71 19 chr17 11271520 11271681 -84000970 - Lx9 LINE L1 -332 7312 7146 3 670 252 77 0 0 chr17 11271681 11271720 -84000931 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 3 83 6115 195 71 19 chr17 11271720 11272642 -84000009 - Lx9 LINE L1 -499 7145 6183 3 671 207 0 0 0 chr17 11273136 11273159 -83999492 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 671 216 277 31 0 chr17 11273610 11273675 -83998976 + MIRb SINE MIR 58 124 -144 3 671 321 268 54 108 chr17 11274557 11274724 -83997927 - ORR1E LTR MaLR -132 238 81 3 671 432 0 0 0 chr17 11274978 11275026 -83997625 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 3 671 426 210 31 164 chr17 11275083 11275264 -83997387 - ORR1D1 LTR MaLR -21 357 197 3 671 967 35 40 23 chr17 11275696 11275873 -83996778 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 671 623 286 75 39 chr17 11275901 11276181 -83996470 - B4A SINE B4 0 292 3 3 671 310 318 87 0 chr17 11276604 11276730 -83995921 + MIR SINE MIR 16 152 -110 3 671 23 86 0 0 chr17 11276863 11276921 -83995730 + AT_rich Low_complexity Low_complexity 1 58 0 3 671 180 125 0 0 chr17 11277440 11277472 -83995179 + (TTTTG)n Simple_repeat Simple_repeat 5 36 0 3 671 313 280 172 0 chr17 11277477 11277570 -83995081 - PB1D7 SINE Alu -5 115 7 3 671 312 251 100 10 chr17 11277576 11277691 -83994960 + PB1 SINE Alu 6 125 -2 3 671 1034 167 136 0 chr17 11277897 11278095 -83994556 - URR1A DNA MER1_type -1 225 1 3 671 27 0 0 0 chr17 11278561 11278588 -83994063 + AT_rich Low_complexity Low_complexity 1 27 0 3 671 687 258 140 122 chr17 11278675 11278826 -83993825 - L1MB7 LINE L1 -9 6175 5989 3 671 198 0 0 0 chr17 11278826 11278848 -83993803 + (TCC)n Simple_repeat Simple_repeat 3 24 0 3 671 687 258 140 122 chr17 11278848 11279309 -83993342 - L1MB7 LINE L1 -196 5988 5553 3 671 336 48 0 0 chr17 11280551 11280593 -83992058 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 671 336 24 0 0 chr17 11280593 11280633 -83992018 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 671 21 36 0 0 chr17 11281673 11281701 -83990950 + AT_rich Low_complexity Low_complexity 1 28 0 3 671 1064 96 0 7 chr17 11283561 11283708 -83988943 - B1_Mus1 SINE Alu -1 147 2 3 671 329 233 12 0 chr17 11283728 11283814 -83988837 - Lx9 LINE L1 -3 7641 7555 3 671 2210 204 53 6 chr17 11283826 11284295 -83988356 - Lx9 LINE L1 -394 7250 6760 3 671 265 24 48 0 chr17 11285197 11285239 -83987412 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 3 671 351 0 0 0 chr17 11286815 11286854 -83985797 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 671 234 0 0 0 chr17 11286854 11286879 -83985772 + (GA)n Simple_repeat Simple_repeat 1 26 0 3 671 986 265 21 14 chr17 11287584 11287867 -83984784 - RMER15 LTR ERVL -18 557 273 3 671 340 190 23 23 chr17 11287899 11287985 -83984666 - RMER15 LTR ERVL -449 126 41 3 671 1067 164 119 0 chr17 11287988 11288189 -83984462 - URR1A DNA MER1_type -1 225 1 3 671 752 366 7 7 chr17 11289273 11289551 -83983100 - B4 SINE B4 -14 278 1 3 671 941 135 36 31 chr17 11289557 11289763 -83982888 + URR1B DNA MER1_type 2 225 0 3 671 1051 97 28 0 chr17 11290540 11290716 -83981935 - RLTR9D LTR ERVK -4 411 231 3 671 3088 41 0 5 chr17 11290716 11291085 -83981566 - IAPLTR1_Mm LTR ERVK 0 367 1 3 671 56477 23 15 7 chr17 11291085 11297507 -83975144 - IAPEz-int LTR ERVK 0 6481 8 3 671 3088 41 0 5 chr17 11297507 11297876 -83974775 - IAPLTR1_Mm LTR ERVK 0 367 1 3 671 1678 71 21 0 chr17 11297877 11298116 -83974535 - RLTR9D LTR ERVK -159 244 1 3 671 440 336 76 23 chr17 11298377 11298679 -83973972 - MLT1B LTR MaLR -70 320 3 3 671 273 266 0 25 chr17 11298997 11299078 -83973573 - Lx8 LINE L1 -142 7331 7253 3 671 36 0 0 0 chr17 11299092 11299128 -83973523 + AT_rich Low_complexity Low_complexity 1 36 0 3 671 187 273 115 8 chr17 11300803 11300925 -83971726 - L2a LINE L2 -239 3187 3053 3 671 233 298 31 31 chr17 11302897 11302994 -83969657 + MLT1A1 LTR MaLR 308 404 -4 3 671 351 0 0 0 chr17 11304030 11304069 -83968582 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 671 232 362 54 30 chr17 11304974 11305142 -83967509 - MLT1F LTR MaLR -364 184 13 3 671 535 245 0 33 chr17 11307299 11307451 -83965200 - MMAR1 DNA Mariner 0 1286 1140 3 671 787 271 152 42 chr17 11307452 11307931 -83964720 - RMER5 LTR ERV1 0 534 3 3 671 1495 254 137 22 chr17 11307955 11308451 -83964200 - MMAR1 DNA Mariner -164 1122 570 3 671 914 153 93 0 chr17 11309352 11309535 -83963116 - URR1A DNA MER1_type -23 203 4 3 671 273 57 0 0 chr17 11309895 11309930 -83962721 + (TC)n Simple_repeat Simple_repeat 1 35 0 3 671 1182 119 38 1 chr17 11310415 11310676 -83961975 + RMER17A2 LTR ERVK 664 958 0 3 671 304 73 0 0 chr17 11310798 11310839 -83961812 - HAL1-3A_ME LINE L1 -840 2018 1978 3 671 506 243 6 0 chr17 11310845 11311022 -83961629 + (TG)n Simple_repeat Simple_repeat 2 179 0 3 671 353 22 0 21 chr17 11313542 11313589 -83959062 + (TAA)n Simple_repeat Simple_repeat 1 46 0 3 671 531 0 0 0 chr17 11314137 11314196 -83958455 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 671 758 252 53 24 chr17 11314541 11314748 -83957903 - B3 SINE B2 -2 214 2 3 671 643 308 32 22 chr17 11315872 11316184 -83956467 - L1MA4 LINE L1 -403 5897 5583 3 671 239 269 93 28 chr17 11316184 11316291 -83956360 - L1MA4 LINE L1 -864 5436 5323 3 671 531 298 160 24 chr17 11316568 11317238 -83955413 - L1MA4 LINE L1 -934 5206 4416 3 671 24 0 0 0 chr17 11318957 11318981 -83953670 + AT_rich Low_complexity Low_complexity 1 24 0 3 671 222 37 0 0 chr17 11321799 11321826 -83950825 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 3 671 282 258 31 10 chr17 11322017 11322115 -83950536 - ORR1E LTR MaLR -253 106 7 3 671 219 209 0 0 chr17 11322555 11322598 -83950053 + RSINE1 SINE B4 75 117 -48 3 671 238 209 0 0 chr17 11322640 11322683 -83949968 + RSINE1 SINE B4 75 117 -48 3 671 618 314 10 0 chr17 11322686 11322890 -83949761 + B3 SINE B2 5 210 -6 3 671 342 0 0 0 chr17 11323166 11323204 -83949447 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 671 681 13 0 0 chr17 11324092 11324170 -83948481 + (CA)n Simple_repeat Simple_repeat 1 78 0 3 671 219 103 0 0 chr17 11324227 11324266 -83948385 + (A)n Simple_repeat Simple_repeat 1 39 0 3 671 406 282 189 26 chr17 11324628 11324781 -83947870 + B3 SINE B2 1 178 -38 3 671 685 297 5 59 chr17 11326287 11326509 -83946142 + B3 SINE B2 6 215 -1 3 671 4977 92 1 1 chr17 11327063 11327726 -83944925 - L1_Mm LINE L1 -13 5870 5208 3 671 503 51 0 0 chr17 11327750 11327809 -83944842 + L1_Mus2 LINE L1 6224 6282 -284 3 671 681 189 0 53 chr17 11327802 11327930 -83944721 - Lx7 LINE L1 -1654 6042 5922 3 671 4131 112 7 3 chr17 11327930 11328512 -83944139 + MT2B2 LTR ERVL 1 584 0 3 671 681 189 0 53 chr17 11328512 11328534 -83944117 - Lx7 LINE L1 -1775 5921 5900 3 671 1737 173 0 28 chr17 11328749 11329070 -83943581 - RLTR28 LTR ERVL -212 312 1 3 671 1011 150 0 0 chr17 11329353 11329526 -83943125 + CT-rich Low_complexity Low_complexity 4 176 0 3 671 201 74 0 0 chr17 11329526 11329553 -83943098 + (TCC)n Simple_repeat Simple_repeat 3 29 0 3 671 23 0 0 0 chr17 11330092 11330115 -83942536 + AT_rich Low_complexity Low_complexity 1 23 0 3 671 31 0 0 0 chr17 11330349 11330380 -83942271 + AT_rich Low_complexity Low_complexity 1 31 0 3 671 25 31 0 0 chr17 11330425 11330457 -83942194 + AT_rich Low_complexity Low_complexity 1 32 0 3 671 675 254 143 39 chr17 11331102 11331360 -83941291 - ORR1D2 LTR MaLR 0 370 86 3 671 321 68 0 0 chr17 11331385 11331429 -83941222 + (GA)n Simple_repeat Simple_repeat 1 44 0 3 671 240 35 0 0 chr17 11331934 11331963 -83940688 + (TA)n Simple_repeat Simple_repeat 1 29 0 3 671 613 293 63 30 chr17 11333181 11333452 -83939199 - B4A SINE B4 -12 280 1 3 671 335 344 76 20 chr17 11333512 11333761 -83938890 - LTR40c LTR ERVL -185 280 18 3 671 364 313 30 10 chr17 11333901 11334001 -83938650 - RMER5 LTR ERV1 -14 520 419 3 671 1773 203 71 0 chr17 11333996 11334376 -83938275 - MTD LTR MaLR -8 411 5 3 671 988 298 81 11 chr17 11334383 11334743 -83937908 - RMER5 LTR ERV1 -102 432 48 3 671 581 348 38 93 chr17 11336469 11336795 -83935856 - MLT1A LTR MaLR -42 366 25 3 671 428 205 398 25 chr17 11337625 11337834 -83934817 - ORR1D1 LTR MaLR -43 331 32 3 671 252 254 0 0 chr17 11337999 11338054 -83934597 + RSINE1 SINE B4 2 56 -109 3 671 863 238 215 29 chr17 11338867 11339179 -83933472 + ORR1D1 LTR MaLR 1 370 -4 3 671 960 223 0 57 chr17 11339220 11339448 -83933203 + B3 SINE B2 1 215 -1 3 671 329 310 8 72 chr17 11339530 11339655 -83932996 + PB1D10 SINE Alu 1 117 0 3 671 2250 141 41 102 chr17 11339934 11340077 -83932574 - RMER6B LTR ERVK -2 459 319 3 671 423 0 0 0 chr17 11340077 11340124 -83932527 + (CAA)n Simple_repeat Simple_repeat 2 48 0 3 671 2250 141 41 102 chr17 11340124 11340469 -83932182 - RMER6B LTR ERVK -143 318 1 3 671 484 107 45 226 chr17 11340470 11340603 -83932048 - RMER6B LTR ERVK -350 111 3 3 671 579 307 34 17 chr17 11340656 11340835 -83931816 + B4A SINE B4 8 189 -103 3 671 315 291 62 23 chr17 11340882 11341012 -83931639 - L1MC LINE L1 -872 5274 5140 3 671 393 308 27 27 chr17 11341428 11341575 -83931076 + RMER15 LTR ERVL 351 497 -78 4 671 370 259 0 27 chr17 11342741 11342852 -83929799 + GA-rich Low_complexity Low_complexity 1 108 0 4 671 326 331 98 96 chr17 11342949 11343420 -83929231 - L1ME1 LINE L1 -104 6075 5604 4 671 274 325 87 19 chr17 11343575 11343617 -83929034 - L1MEc LINE L1 -743 5576 5535 4 671 7644 83 6 10 chr17 11343617 11344654 -83927997 - RLTR13D4 LTR ERVK 0 1033 1 4 671 289 325 87 19 chr17 11344654 11344934 -83927717 - L1MEc LINE L1 -785 5534 5232 4 671 638 238 172 69 chr17 11345471 11345774 -83926877 - MTEa LTR MaLR -2 377 44 4 671 306 0 0 0 chr17 11345779 11345813 -83926838 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 671 714 24 0 0 chr17 11345813 11345896 -83926755 + (GA)n Simple_repeat Simple_repeat 1 84 0 4 671 332 191 235 41 chr17 11345931 11346029 -83926622 - RSINE1 SINE B4 -38 127 11 4 671 227 312 73 0 chr17 11346172 11346268 -83926383 - L1MEc LINE L1 -5606 794 692 4 671 206 62 31 0 chr17 11346643 11346675 -83925976 + (TC)n Simple_repeat Simple_repeat 1 33 0 4 671 33 0 0 0 chr17 11346768 11346801 -83925850 + AT_rich Low_complexity Low_complexity 1 33 0 4 671 180 0 0 0 chr17 11347253 11347273 -83925378 + (A)n Simple_repeat Simple_repeat 1 20 0 4 671 481 274 16 16 chr17 11347646 11347772 -83924879 - RMER5 LTR ERV1 -10 524 399 4 671 836 232 73 5 chr17 11347798 11347989 -83924662 - B3 SINE B2 0 216 13 4 671 1247 207 174 83 chr17 11351368 11351896 -83920755 - RMER4B LTR ERVK -9 576 1 4 671 285 330 39 0 chr17 11352052 11352155 -83920496 + PB1D7 SINE Alu 9 115 -5 4 671 460 251 199 0 chr17 11353082 11353253 -83919398 + MER2 DNA MER2_type 24 228 -117 4 671 315 0 0 0 chr17 11354021 11354056 -83918595 + (CGTG)n Simple_repeat Simple_repeat 1 35 0 4 671 2075 237 67 87 chr17 11356500 11356662 -83915989 - RCHARR1 DNA MER1_type -11 963 815 4 671 6276 47 26 0 chr17 11356662 11357431 -83915220 + L1Md_F2 LINE L1 5782 6570 -12 4 671 2075 237 67 87 chr17 11357431 11358092 -83914559 - RCHARR1 DNA MER1_type -160 814 157 4 671 963 224 6 0 chr17 11358858 11359037 -83913614 + ORR1C1 LTR MaLR 1 180 -198 4 671 568 183 8 15 chr17 11359038 11359171 -83913480 + CT-rich Low_complexity Low_complexity 4 135 0 4 671 620 238 110 24 chr17 11359180 11359344 -83913307 + ORR1C1 LTR MaLR 166 343 -31 4 671 479 312 115 54 chr17 11359355 11360040 -83912611 + L1_Rod LINE L1 1625 2351 -3496 4 671 870 300 64 19 chr17 11360421 11360904 -83911747 + L1M2 LINE L1 2543 3047 -3096 4 671 261 303 78 11 chr17 11362406 11362496 -83910155 + MER91B DNA Tip100 92 187 -3 4 671 1590 248 66 11 chr17 11362726 11363105 -83909546 - MTD LTR MaLR -8 411 12 4 671 28 0 0 0 chr17 11363135 11363163 -83909488 + AT_rich Low_complexity Low_complexity 1 28 0 4 671 344 283 34 34 chr17 11364325 11364442 -83908209 - MLT1A1 LTR MaLR -2 406 290 4 671 1212 54 0 0 chr17 11364701 11364848 -83907803 - B1_Mus1 SINE Alu 0 148 2 4 671 185 383 83 21 chr17 11364913 11365057 -83907594 - MIR SINE MIR -95 167 15 4 671 187 296 55 27 chr17 11366315 11366388 -83906263 + L2c LINE L2 3300 3374 -13 4 671 465 142 18 9 chr17 11368580 11368694 -83903957 + (TG)n Simple_repeat Simple_repeat 1 115 0 4 671 591 259 201 46 chr17 11368716 11368955 -83903696 - B4A SINE B4 -16 276 1 4 671 195 129 0 0 chr17 11370002 11370033 -83902618 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 671 387 0 0 0 chr17 11370041 11370084 -83902567 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 4 671 229 243 176 42 chr17 11370836 11371029 -83901622 - L1MD LINE L1 -2523 5472 5254 4 671 469 265 43 22 chr17 11371120 11371259 -83901392 - B1F2 SINE Alu -2 147 6 4 671 201 121 0 0 chr17 11371268 11371301 -83901350 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 4 671 24 77 0 0 chr17 11371317 11371369 -83901282 + AT_rich Low_complexity Low_complexity 1 52 0 4 671 610 248 7 29 chr17 11371374 11371511 -83901140 + B1_Mur1 SINE Alu 5 138 -11 4 671 234 62 0 0 chr17 11371514 11371546 -83901105 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 4 671 706 300 35 13 chr17 11371689 11371919 -83900732 - B4A SINE B4 -56 236 2 4 671 242 273 132 18 chr17 11371984 11372204 -83900447 - L1MD LINE L1 -2073 4073 3829 4 671 524 281 74 0 chr17 11372381 11372502 -83900149 + B3A SINE B2 2 131 -67 4 671 27 29 0 0 chr17 11372536 11372570 -83900081 + AT_rich Low_complexity Low_complexity 1 34 0 4 671 1055 185 35 44 chr17 11372675 11372901 -83899750 + URR1A DNA MER1_type 3 226 0 4 671 321 309 60 36 chr17 11373022 11373367 -83899284 - L1M4 LINE L1 -2451 3695 3350 4 671 421 286 207 4 chr17 11373367 11373599 -83899052 + B4A SINE B4 2 280 -12 4 671 597 302 82 41 chr17 11373785 11374127 -83898524 - L1M4 LINE L1 -2958 3188 2833 4 671 591 337 53 49 chr17 11374460 11374931 -83897720 - L1MC LINE L1 -861 5285 4813 4 671 25 0 0 0 chr17 11375478 11375503 -83897148 + AT_rich Low_complexity Low_complexity 1 25 0 4 671 450 0 0 0 chr17 11376056 11376106 -83896545 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 671 462 36 0 0 chr17 11376308 11376364 -83896287 + (GA)n Simple_repeat Simple_repeat 1 56 0 4 671 21 36 0 0 chr17 11377082 11377110 -83895541 + AT_rich Low_complexity Low_complexity 1 28 0 4 671 443 250 19 0 chr17 11377220 11377324 -83895327 + B1F2 SINE Alu 32 137 -12 4 671 344 247 114 1 chr17 11377679 11377789 -83894862 + L1MB3 LINE L1 5370 5492 -670 4 671 535 244 70 0 chr17 11377790 11377905 -83894746 + B3A SINE B2 4 126 -72 4 671 453 116 0 0 chr17 11377951 11378020 -83894631 + (TA)n Simple_repeat Simple_repeat 1 69 0 4 671 611 319 26 0 chr17 11378230 11378503 -83894148 + L1MB3 LINE L1 5673 5952 -231 4 671 217 298 0 0 chr17 11378505 11378552 -83894099 + (CATG)n Simple_repeat Simple_repeat 3 49 0 4 671 393 315 4 107 chr17 11378571 11378813 -83893838 - RMER12 LTR ERVK -334 988 772 4 671 241 293 11 17 chr17 11379701 11379791 -83892860 - B1_Mus1 SINE Alu -16 101 14 4 671 1307 109 5 5 chr17 11380802 11380995 -83891656 + MT2B LTR ERVL 329 521 -80 4 671 354 276 169 41 chr17 11382052 11382271 -83890380 + LTR16B1 LTR ERVL 1 247 -233 4 671 303 179 0 0 chr17 11382536 11382603 -83890048 + A-rich Low_complexity Low_complexity 1 67 0 4 671 305 282 0 49 chr17 11382695 11382818 -83889833 + L1MB2 LINE L1 6054 6170 -1 4 671 263 353 8 98 chr17 11383063 11383195 -83889456 + Charlie4z DNA MER1_type 15 134 -33 4 671 378 349 43 32 chr17 11383296 11383574 -83889077 + L3 LINE CR1 3462 3742 -747 4 671 367 258 5 3 chr17 11384258 11384341 -83888310 + B1F SINE Alu 13 98 -50 4 671 188 163 23 0 chr17 11384341 11384384 -83888267 + GA-rich Low_complexity Low_complexity 2 45 0 4 671 612 299 43 29 chr17 11385449 11385725 -83886926 - B4A SINE B4 -8 284 5 4 671 207 286 0 0 chr17 11385810 11385859 -83886792 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 671 288 0 0 0 chr17 11388259 11388291 -83884360 + (TTTG)n Simple_repeat Simple_repeat 3 34 0 4 671 438 53 0 0 chr17 11389962 11390019 -83882632 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 671 494 150 23 23 chr17 11390474 11390604 -83882047 + CT-rich Low_complexity Low_complexity 2 131 0 4 671 244 289 9 110 chr17 11390780 11390889 -83881762 + MER102a DNA MER1_type 1 98 -232 4 671 25 65 0 0 chr17 11391792 11391838 -83880813 + AT_rich Low_complexity Low_complexity 1 46 0 4 671 242 214 18 0 chr17 11392031 11392087 -83880564 + (CAA)n Simple_repeat Simple_repeat 3 59 0 4 671 287 104 21 0 chr17 11392580 11392628 -83880023 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 671 49 52 0 0 chr17 11392631 11392708 -83879943 + AT_rich Low_complexity Low_complexity 1 77 0 4 671 189 0 0 0 chr17 11392762 11392783 -83879868 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 4 671 183 231 154 0 chr17 11393677 11393742 -83878909 + L3b LINE CR1 281 355 -127 4 671 18437 72 39 5 chr17 11394018 11397224 -83875427 - MusHAL1 LINE L1 0 3353 37 4 671 827 319 52 67 chr17 11397332 11397376 -83875275 - MT2A LTR ERVL -61 472 432 4 671 450 36 0 0 chr17 11397376 11397432 -83875219 + (GA)n Simple_repeat Simple_repeat 1 56 0 4 671 827 319 52 67 chr17 11397432 11397785 -83874866 - MT2A LTR ERVL -102 431 71 4 671 1256 238 156 12 chr17 11397785 11398112 -83874539 - ORR1D1 LTR MaLR 0 374 1 4 671 827 319 52 67 chr17 11398112 11398190 -83874461 - MT2A LTR ERVL -463 70 4 4 671 525 306 79 32 chr17 11399438 11399627 -83873024 + B3A SINE B2 1 198 0 4 671 258 353 82 107 chr17 11401732 11401938 -83870713 - LTR33A_ LTR ERVL -315 216 16 4 671 4921 22 0 0 chr17 11402197 11402862 -83869789 - L1Md_T LINE L1 -435 6147 5483 4 83 3842 24 7 0 chr17 11402862 11403284 -83869367 + L1Md_T LINE L1 6158 6582 0 4 672 474 150 23 29 chr17 11405042 11405214 -83867437 + (TG)n Simple_repeat Simple_repeat 1 171 0 4 672 634 258 60 16 chr17 11406321 11406506 -83866145 + B3 SINE B2 24 216 0 4 672 371 287 18 9 chr17 11406816 11406925 -83865726 - PB1D10 SINE Alu 0 117 8 4 672 324 326 61 41 chr17 11406840 11406987 -83865664 - ID_B1 SINE B4 -49 175 26 4 672 241 325 50 33 chr17 11408182 11408303 -83864348 - MLT1J1 LTR MaLR -282 162 40 4 672 958 306 99 39 chr17 11408631 11409096 -83863555 - Lx9 LINE L1 -383 7261 6769 4 672 244 303 66 0 chr17 11409162 11409238 -83863413 + B3A SINE B2 88 168 -30 4 672 360 0 0 0 chr17 11409612 11409652 -83862999 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 672 1143 93 0 0 chr17 11409767 11410039 -83862612 + (TG)n Simple_repeat Simple_repeat 1 272 0 4 672 590 95 11 0 chr17 11411490 11411585 -83861066 + (TA)n Simple_repeat Simple_repeat 2 97 0 4 672 218 330 27 18 chr17 11411622 11411733 -83860918 + CT-rich Low_complexity Low_complexity 2 113 0 4 672 6515 53 1 5 chr17 11412280 11413043 -83859608 - L1Md_F2 LINE L1 0 6582 5823 4 672 258 32 0 0 chr17 11413043 11413074 -83859577 + L1_Mm LINE L1 1770 1800 -4083 4 672 558 284 53 94 chr17 11413118 11413289 -83859362 + RSINE1 SINE B4 1 164 -1 4 672 237 306 0 0 chr17 11413741 11413813 -83858838 + G-rich Low_complexity Low_complexity 3 74 0 5 672 464 281 54 25 chr17 11414311 11414515 -83858136 + L1MC5 LINE L1 7314 7523 -438 5 672 363 239 26 28 chr17 11414511 11414642 -83858009 + L1MB7 LINE L1 6048 6176 -2 5 672 26 0 0 0 chr17 11414715 11414741 -83857910 + AT_rich Low_complexity Low_complexity 1 26 0 5 672 5653 81 5 1 chr17 11415306 11416432 -83856219 - L1_Mus1 LINE L1 -357 6210 5079 5 672 2926 67 0 0 chr17 11416433 11416779 -83855872 + L1_Mus1 LINE L1 6221 6566 -1 5 672 21 0 0 0 chr17 11417064 11417085 -83855566 + AT_rich Low_complexity Low_complexity 1 21 0 5 672 1785 26 0 0 chr17 11417091 11417283 -83855368 + B2_Mm1a SINE B2 2 193 0 5 672 416 100 0 28 chr17 11419346 11419418 -83853233 + (TATG)n Simple_repeat Simple_repeat 4 73 0 5 672 514 306 113 14 chr17 11420499 11420721 -83851930 - MLT1A1 LTR MaLR 0 408 165 5 672 459 347 80 10 chr17 11420842 11421043 -83851608 + MER44D DNA MER2_type 1 215 -490 5 672 21 0 0 0 chr17 11422386 11422407 -83850244 + AT_rich Low_complexity Low_complexity 1 21 0 5 672 270 247 119 79 chr17 11423106 11423207 -83849444 - PB1D10 SINE Alu -8 109 5 5 672 759 279 88 24 chr17 11423447 11423741 -83848910 + Lx8 LINE L1 7109 7421 -52 5 672 363 167 0 0 chr17 11424258 11424324 -83848327 + A-rich Low_complexity Low_complexity 1 66 0 5 672 1191 65 0 0 chr17 11425315 11425453 -83847198 + B1_Mus2 SINE Alu 1 138 -9 5 672 306 0 0 0 chr17 11425453 11425487 -83847164 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 672 466 322 60 42 chr17 11425572 11425857 -83846794 + B4A SINE B4 1 290 -2 5 672 264 30 0 0 chr17 11426010 11426043 -83846608 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 5 672 618 260 31 52 chr17 11426104 11426295 -83846356 - B4 SINE B4 -18 274 88 5 672 307 287 30 0 chr17 11426678 11426779 -83845872 - MLT1A1 LTR MaLR -13 395 292 5 672 388 216 150 30 chr17 11427143 11427310 -83845341 - Lx9 LINE L1 0 7644 7458 5 672 311 167 39 19 chr17 11427311 11427415 -83845236 + (CATATA)n Simple_repeat Simple_repeat 6 111 0 5 672 1638 173 189 3 chr17 11427431 11427785 -83844866 - Lx9 LINE L1 -148 7496 7077 5 672 527 319 58 19 chr17 11431112 11431320 -83841331 - MLT1A1 LTR MaLR -4 404 189 5 672 341 262 79 0 chr17 11432895 11433059 -83839592 - BLACKJACK DNA AcHobo 0 2944 2768 5 672 363 96 0 0 chr17 11433981 11434033 -83838618 + (TCCCC)n Simple_repeat Simple_repeat 4 55 0 5 672 243 309 71 0 chr17 11434802 11434886 -83837765 - MER5A1 DNA MER1_type -73 93 4 5 672 274 226 62 41 chr17 11435165 11435262 -83837389 - L2a LINE L2 -38 3388 3290 5 672 212 312 108 27 chr17 11435403 11435551 -83837100 - L2a LINE L2 -447 2972 2813 5 672 317 0 70 0 chr17 11435935 11435978 -83836673 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 5 672 1108 109 0 0 chr17 11435978 11436116 -83836535 - B1_Mus1 SINE Alu -10 138 1 5 672 601 233 8 40 chr17 11436261 11436386 -83836265 + RSINE1 SINE B4 4 124 -41 5 672 564 42 0 0 chr17 11436386 11436457 -83836194 + (CA)n Simple_repeat Simple_repeat 2 72 0 5 672 916 306 151 29 chr17 11436624 11437115 -83835536 - Lx8 LINE L1 -1 7472 6922 5 672 441 54 0 0 chr17 11438341 11438397 -83834254 + (TCCC)n Simple_repeat Simple_repeat 4 59 0 5 672 364 355 0 0 chr17 11438429 11438536 -83834115 - PB1D10 SINE Alu -8 109 3 5 672 318 115 0 0 chr17 11439080 11439132 -83833519 + (GGA)n Simple_repeat Simple_repeat 3 54 0 5 672 1955 316 78 31 chr17 11439132 11440533 -83832118 + L1_Mus3 LINE L1 4452 5922 -716 5 672 409 311 71 9 chr17 11440805 11441029 -83831622 + L1MA6 LINE L1 5997 6234 -66 5 672 558 180 26 13 chr17 11441066 11441218 -83831433 + (TATG)n Simple_repeat Simple_repeat 1 154 0 5 672 954 140 0 0 chr17 11441220 11441399 -83831252 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 672 582 226 17 0 chr17 11442955 11443070 -83829581 + B3A SINE B2 13 129 -69 5 672 503 314 24 48 chr17 11445040 11445207 -83827444 + RSINE1 SINE B4 3 165 0 5 672 189 0 0 0 chr17 11445226 11445247 -83827404 + (CCA)n Simple_repeat Simple_repeat 3 23 0 5 672 22 0 0 0 chr17 11445275 11445297 -83827354 + AT_rich Low_complexity Low_complexity 1 22 0 5 672 3154 252 85 25 chr17 11446272 11447498 -83825153 - L1_Mur3 LINE L1 -2726 3154 1856 5 672 236 154 0 0 chr17 11447565 11447604 -83825047 - L1MEc LINE L1 -4715 1685 1647 5 672 228 135 0 0 chr17 11447571 11447608 -83825043 - L1_Mur3 LINE L1 -4011 1869 1833 5 672 242 227 13 26 chr17 11447625 11447702 -83824949 + T-rich Low_complexity Low_complexity 3 78 0 5 672 241 269 0 0 chr17 11448572 11448650 -83824001 + (CAGAGA)n Simple_repeat Simple_repeat 2 79 0 5 672 558 0 0 0 chr17 11449996 11450058 -83822593 + (CAATA)n Simple_repeat Simple_repeat 2 63 0 5 672 243 0 0 0 chr17 11451620 11451647 -83821004 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 672 335 342 40 58 chr17 11452204 11452480 -83820171 - LTR37B LTR ERV1 0 468 198 5 672 549 68 0 0 chr17 11452653 11452727 -83819924 + L1_Mus2 LINE L1 6493 6566 0 5 672 366 162 0 0 chr17 11452811 11452885 -83819766 + (TA)n Simple_repeat Simple_repeat 2 75 0 5 672 186 43 0 0 chr17 11453012 11453035 -83819616 + (TTTTA)n Simple_repeat Simple_repeat 5 27 0 5 672 751 210 219 12 chr17 11453035 11453197 -83819454 - B3 SINE B2 -16 200 2 5 672 687 225 33 55 chr17 11456493 11456676 -83815975 + URR1A DNA MER1_type 48 226 0 5 672 1198 133 29 0 chr17 11457031 11457204 -83815447 - B2_Mm2 SINE B2 -16 179 2 5 672 1226 47 0 63 chr17 11457352 11457510 -83815141 + B1_Mus1 SINE Alu 1 148 0 5 672 228 111 0 0 chr17 11457510 11457546 -83815105 + (A)n Simple_repeat Simple_repeat 1 36 0 5 672 243 0 0 0 chr17 11458061 11458088 -83814563 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 5 672 182 326 122 7 chr17 11458184 11458323 -83814328 + MIRb SINE MIR 95 249 -19 5 672 325 300 10 20 chr17 11459716 11459818 -83812833 + PB1D10 SINE Alu 4 104 -13 5 672 239 292 159 67 chr17 11459901 11460184 -83812467 - MER92B LTR ERV1 -57 579 271 5 672 234 292 122 13 chr17 11460904 11461060 -83811591 + L2 LINE L2 2819 2991 -428 5 672 262 211 59 106 chr17 11462212 11462297 -83810354 + RMER15 LTR ERVL 495 575 0 5 672 227 354 60 20 chr17 11465480 11465630 -83807021 - L2a LINE L2 -2 3424 3269 5 672 338 318 157 45 chr17 11465920 11466281 -83806370 - L2a LINE L2 -562 2857 2453 5 672 2210 183 68 5 chr17 11466281 11466677 -83805974 + MTC LTR MaLR 1 421 0 5 672 338 318 157 45 chr17 11466677 11466697 -83805954 - L2a LINE L2 -967 2452 2433 5 672 387 307 61 30 chr17 11466764 11466787 -83805864 + ID_B1 SINE B4 88 187 -37 5 672 480 218 39 10 chr17 11466787 11466889 -83805762 + B1F SINE Alu 37 141 -8 5 672 930 273 91 37 chr17 11466948 11467298 -83805353 + MTEb LTR MaLR 4 372 -7 5 672 985 211 88 0 chr17 11467535 11467729 -83804922 + B3 SINE B2 6 216 0 5 672 355 310 77 34 chr17 11467766 11467883 -83804768 + PB1 SINE Alu 1 122 -5 5 672 209 57 0 28 chr17 11467883 11467919 -83804732 + (GA)n Simple_repeat Simple_repeat 1 35 0 5 672 286 229 10 135 chr17 11468879 11468975 -83803676 - PB1D10 SINE Alu -29 88 5 5 672 923 189 0 0 chr17 11468998 11469141 -83803510 - B1_Mur2 SINE Alu -2 147 5 5 672 233 227 0 0 chr17 11469153 11469197 -83803454 - B3 SINE B2 -11 205 162 5 672 312 153 153 0 chr17 11469203 11469275 -83803376 - B2_Mm2 SINE B2 -112 83 1 5 672 803 290 55 19 chr17 11469546 11469803 -83802848 - MTD LTR MaLR -15 404 139 5 672 475 216 110 16 chr17 11469783 11469910 -83802741 + B2_Mm2 SINE B2 26 164 -31 5 672 250 326 45 0 chr17 11469937 11470026 -83802625 - MTD LTR MaLR -321 98 6 5 672 323 297 10 0 chr17 11470824 11470925 -83801726 + (TG)n Simple_repeat Simple_repeat 1 102 0 5 672 238 276 108 33 chr17 11471075 11471195 -83801456 - MIRb SINE MIR -127 141 13 5 672 1491 199 74 32 chr17 11472291 11472629 -83800022 - ORR1D1 LTR MaLR -4 370 19 5 672 264 130 0 0 chr17 11473147 11473193 -83799458 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 5 672 256 271 0 0 chr17 11473194 11473253 -83799398 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 5 672 920 293 75 109 chr17 11473831 11474353 -83798298 - MLT1E1A LTR MaLR -81 599 114 5 672 274 292 0 50 chr17 11475340 11475441 -83797210 - PB1D10 SINE Alu -1 116 21 5 672 267 340 115 45 chr17 11475655 11475812 -83796839 - MIRc SINE MIR -99 169 2 5 672 183 343 92 37 chr17 11475898 11476007 -83796644 + MIRb SINE MIR 31 145 -123 5 672 294 194 0 0 chr17 11476469 11476531 -83796120 + (TAGA)n Simple_repeat Simple_repeat 4 65 0 5 672 200 237 0 17 chr17 11476621 11476681 -83795970 + A-rich Low_complexity Low_complexity 3 61 0 5 672 234 296 154 7 chr17 11478602 11478738 -83793913 - MER3 DNA MER1_type -22 187 32 5 672 1095 207 35 0 chr17 11479360 11479563 -83793088 + B3 SINE B2 1 210 -6 5 672 4011 32 5 0 chr17 11481072 11481506 -83791145 - RLTR10C LTR ERVK 0 436 1 5 672 6413 60 60 17 chr17 11483427 11484294 -83788357 + L1_Mus2 LINE L1 5663 6566 0 5 672 22 0 0 0 chr17 11485513 11485535 -83787116 + AT_rich Low_complexity Low_complexity 1 22 0 5 672 36460 80 10 1 chr17 11485535 11492051 -83780600 - L1_Mus1 LINE L1 -1 6566 98 5 672 230 265 92 17 chr17 11493527 11493646 -83779005 - MER3 DNA MER1_type -24 185 58 5 672 1231 142 17 47 chr17 11493811 11494047 -83778604 - Lx5 LINE L1 -43 7007 6779 5 672 234 0 0 0 chr17 11496780 11496806 -83775845 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 672 252 0 0 0 chr17 11496851 11496879 -83775772 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 672 1078 117 0 11 chr17 11496886 11497067 -83775584 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 6 672 236 335 57 38 chr17 11497385 11497596 -83775055 + Cheshire DNA MER1_type 37 251 -2169 6 672 324 291 88 56 chr17 11498775 11498935 -83773716 - MIRb SINE MIR -51 217 53 6 672 435 87 0 0 chr17 11499002 11499071 -83773580 + (CA)n Simple_repeat Simple_repeat 1 69 0 6 672 183 222 0 0 chr17 11503039 11503084 -83769567 + (TATG)n Simple_repeat Simple_repeat 3 47 0 1 672 192 40 0 0 chr17 11503245 11503270 -83769381 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 2 672 353 250 0 0 chr17 11505100 11505188 -83767463 + L1MC1 LINE L1 6245 6332 -1 3 672 262 333 48 7 chr17 11506767 11506912 -83765739 - MER3 DNA MER1_type 0 209 59 4 672 181 304 77 17 chr17 11509546 11509663 -83762988 + MIR3 SINE MIR 64 187 -21 5 672 266 0 0 29 chr17 11510459 11510494 -83762157 + (GGGGA)n Simple_repeat Simple_repeat 3 36 0 6 672 180 0 0 0 chr17 11510537 11510557 -83762094 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 7 672 297 0 0 0 chr17 11511176 11511209 -83761442 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 672 249 183 0 0 chr17 11513729 11513789 -83758862 + (TG)n Simple_repeat Simple_repeat 1 60 0 9 672 296 305 8 0 chr17 11517259 11517377 -83755274 + GA-rich Low_complexity Low_complexity 2 120 0 1 672 188 194 27 18 chr17 11517392 11517502 -83755149 + (CAGAGA)n Simple_repeat Simple_repeat 6 116 0 1 672 351 0 0 0 chr17 11517536 11517575 -83755076 + (GA)n Simple_repeat Simple_repeat 2 40 0 1 672 384 59 0 0 chr17 11519325 11519376 -83753275 + (TCCCC)n Simple_repeat Simple_repeat 3 53 0 1 672 21 0 0 0 chr17 11519543 11519564 -83753087 + AT_rich Low_complexity Low_complexity 1 21 0 1 672 717 228 207 26 chr17 11519849 11520148 -83752503 + ORR1D2 LTR MaLR 18 370 0 1 672 449 286 0 96 chr17 11520625 11520803 -83751848 + ID_B1 SINE B4 2 162 -62 1 672 242 229 78 125 chr17 11520808 11521103 -83751548 + L1M3e LINE L1 1364 1644 -5386 1 672 393 230 99 75 chr17 11521161 11521696 -83750955 + L1M3e LINE L1 1225 1772 -5258 1 672 252 186 84 102 chr17 11521763 11521978 -83750673 + L1M3e LINE L1 1461 1671 -5359 1 672 865 279 57 14 chr17 11522229 11522509 -83750142 + B4 SINE B4 1 292 0 1 672 427 207 0 15 chr17 11522514 11522651 -83750000 + (CA)n Simple_repeat Simple_repeat 2 136 0 2 672 261 240 23 11 chr17 11522728 11522905 -83749746 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 672 196 384 51 0 chr17 11523117 11523255 -83749396 + MIRc SINE MIR 79 223 -45 2 672 22 0 0 0 chr17 11525707 11525729 -83746922 + AT_rich Low_complexity Low_complexity 1 22 0 2 672 204 152 22 0 chr17 11525978 11526024 -83746627 + A-rich Low_complexity Low_complexity 5 51 0 2 672 22 0 0 0 chr17 11526071 11526093 -83746558 + AT_rich Low_complexity Low_complexity 1 22 0 2 672 412 323 78 105 chr17 11526620 11526993 -83745658 + MTEa LTR MaLR 5 367 -12 2 672 1104 88 0 7 chr17 11527717 11527866 -83744785 + B1_Mus1 SINE Alu 1 148 0 2 672 636 14 0 0 chr17 11527870 11527943 -83744708 + (GA)n Simple_repeat Simple_repeat 2 74 0 2 672 462 143 0 0 chr17 11527945 11528022 -83744629 + (A)n Simple_repeat Simple_repeat 1 77 0 2 672 2286 164 63 23 chr17 11528025 11528637 -83744014 - RLTR31_Mm LTR ERVK -22 539 2 3 672 8138 55 10 3 chr17 11529808 11531157 -83741494 - L1_Mus1 LINE L1 0 6567 5209 3 672 7507 92 8 1 chr17 11531156 11532195 -83740456 + L1_Mus1 LINE L1 4167 5212 -671 3 672 400 279 35 18 chr17 11532708 11532821 -83739830 + MER2B DNA MER2_type 217 331 -5 3 672 640 306 131 43 chr17 11532838 11533498 -83739153 - L1ME2z LINE L1 -132 6312 5591 3 673 227 326 43 0 chr17 11534371 11534463 -83738188 - B4A SINE B4 -76 216 121 3 673 28 61 0 0 chr17 11534493 11534542 -83738109 + AT_rich Low_complexity Low_complexity 1 49 0 3 673 389 219 208 58 chr17 11535312 11535472 -83737179 + B4 SINE B4 2 199 -93 3 673 450 0 0 0 chr17 11535501 11535551 -83737100 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 673 1267 40 0 0 chr17 11536241 11536392 -83736259 - L1_Mus3 LINE L1 -666 5972 5822 3 673 4870 75 23 1 chr17 11536392 11537047 -83735604 + L1_Mus3 LINE L1 5970 6638 0 3 673 25 0 0 0 chr17 11537047 11537072 -83735579 + AT_rich Low_complexity Low_complexity 1 25 0 3 673 27 29 0 0 chr17 11537778 11537812 -83734839 + AT_rich Low_complexity Low_complexity 1 34 0 4 673 538 191 11 0 chr17 11537890 11537984 -83734667 - RLTR20D LTR ERVK 0 568 474 4 673 1377 162 41 4 chr17 11538023 11538290 -83734361 - RLTR20D LTR ERVK -92 476 200 4 673 261 323 52 15 chr17 11538709 11538844 -83733807 - L1M5 LINE L1 -2532 3614 3475 4 673 2570 266 170 21 chr17 11538897 11539820 -83732831 - Lx8 LINE L1 -2 7471 6412 4 673 465 304 156 20 chr17 11539823 11540310 -83732341 - L1MC LINE L1 -2697 3449 2897 4 673 304 312 61 30 chr17 11540502 11540667 -83731984 - L1MEc LINE L1 -3494 2825 2656 4 673 211 269 0 0 chr17 11540945 11540997 -83731654 - PB1D9 SINE Alu -6 114 63 4 673 414 0 0 0 chr17 11541030 11541076 -83731575 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 673 337 116 29 0 chr17 11541331 11541400 -83731251 + (CATATA)n Simple_repeat Simple_repeat 1 71 0 4 673 476 289 245 24 chr17 11541416 11542011 -83730640 - L1MEc LINE L1 -4373 2027 1301 4 673 250 200 11 32 chr17 11542060 11542153 -83730498 + (TG)n Simple_repeat Simple_repeat 2 92 0 4 673 22 0 0 0 chr17 11543409 11543431 -83729220 + AT_rich Low_complexity Low_complexity 1 22 0 5 673 525 272 129 21 chr17 11543889 11544129 -83728522 - Lx8 LINE L1 -244 7229 6964 5 673 414 39 0 0 chr17 11545238 11545290 -83727361 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 673 4773 158 73 13 chr17 11545793 11546763 -83725888 - RLTR25B LTR ERVK 0 1028 1 5 673 573 55 0 0 chr17 11546807 11546880 -83725771 + (TG)n Simple_repeat Simple_repeat 1 73 0 5 673 522 0 0 0 chr17 11547993 11548051 -83724600 + (GA)n Simple_repeat Simple_repeat 1 58 0 5 673 1617 69 14 0 chr17 11548571 11548788 -83723863 + L1Md_F2 LINE L1 6360 6579 -3 5 673 231 309 49 0 chr17 11549914 11549995 -83722656 + MTEb LTR MaLR 1 85 -294 5 673 409 320 61 11 chr17 11550037 11550217 -83722434 + MTEb LTR MaLR 161 349 -30 5 673 847 236 60 0 chr17 11550247 11550446 -83722205 - B3 SINE B2 -2 214 4 5 673 4548 56 0 0 chr17 11551744 11552295 -83720356 + L1_Mus1 LINE L1 6017 6567 0 5 673 744 146 18 12 chr17 11553189 11553350 -83719301 - ORR1B1 LTR MaLR -51 343 155 6 673 457 304 72 74 chr17 11555053 11555430 -83717221 - L1MA10 LINE L1 -11 6323 5948 6 673 419 222 64 43 chr17 11555481 11555654 -83716997 - L1MA10 LINE L1 -457 5855 5679 6 673 612 27 0 0 chr17 11555880 11555954 -83716697 + (TG)n Simple_repeat Simple_repeat 2 75 0 6 673 324 312 125 21 chr17 11555955 11556099 -83716552 - RSINE1 SINE B4 -5 160 2 6 673 306 287 74 34 chr17 11556710 11556858 -83715793 + L1ME1 LINE L1 5961 6114 -65 6 673 243 0 0 0 chr17 11557099 11557126 -83715525 + (TC)n Simple_repeat Simple_repeat 2 28 0 6 673 255 79 0 0 chr17 11557126 11557163 -83715488 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 673 794 20 0 20 chr17 11558650 11558751 -83713900 + (CATATA)n Simple_repeat Simple_repeat 4 102 0 6 673 22 0 0 0 chr17 11560094 11560116 -83712535 + AT_rich Low_complexity Low_complexity 1 22 0 6 673 242 338 110 19 chr17 11560439 11560593 -83712058 - MLT1J LTR MaLR -342 170 3 6 673 23 0 0 0 chr17 11560775 11560798 -83711853 + AT_rich Low_complexity Low_complexity 1 23 0 7 673 1872 290 53 27 chr17 11561270 11561872 -83710779 - Lx9 LINE L1 -209 7435 6818 7 673 26 0 0 0 chr17 11561891 11561917 -83710734 + AT_rich Low_complexity Low_complexity 1 26 0 7 673 367 250 0 11 chr17 11561931 11562024 -83710627 + Lx9 LINE L1 6341 6432 -1212 7 673 474 222 11 0 chr17 11562026 11562116 -83710535 + Lx9 LINE L1 6758 6848 -796 7 673 359 315 62 91 chr17 11562131 11562471 -83710180 - MLT1A0 LTR MaLR 0 408 33 7 673 480 282 8 24 chr17 11562738 11562865 -83709786 + ID_B1 SINE B4 100 224 0 7 673 227 140 20 0 chr17 11563150 11563200 -83709451 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 673 238 331 16 24 chr17 11563925 11564049 -83708602 + CT-rich Low_complexity Low_complexity 3 125 0 7 673 742 170 281 11 chr17 11564158 11564336 -83708315 - URR1A DNA MER1_type 0 226 1 7 673 480 310 148 55 chr17 11565699 11566064 -83706587 + MLT1A1 LTR MaLR 10 408 0 7 673 26 64 0 0 chr17 11566572 11566619 -83706032 + AT_rich Low_complexity Low_complexity 1 47 0 8 673 290 216 52 35 chr17 11567541 11567714 -83704937 + (TATAA)n Simple_repeat Simple_repeat 2 177 0 8 673 396 0 0 0 chr17 11569370 11569414 -83703237 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 673 463 303 0 0 chr17 11571129 11571261 -83701390 + (CCA)n Simple_repeat Simple_repeat 1 132 0 8 673 206 95 24 0 chr17 11571316 11571358 -83701293 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 8 673 218 161 35 35 chr17 11571687 11571745 -83700906 + (TATG)n Simple_repeat Simple_repeat 3 60 0 8 673 24 0 0 0 chr17 11572073 11572097 -83700554 + AT_rich Low_complexity Low_complexity 1 24 0 8 673 494 273 37 12 chr17 11572305 11572468 -83700183 - MLT1A0 LTR MaLR -198 167 1 8 673 212 163 0 0 chr17 11572745 11572788 -83699863 + A-rich Low_complexity Low_complexity 1 43 0 8 673 7632 144 55 128 chr17 11574737 11576433 -83696218 - RLTR21 LTR ERVK 0 1572 1 8 673 567 0 0 0 chr17 11576873 11576936 -83695715 + (CACAT)n Simple_repeat Simple_repeat 2 64 0 9 673 249 215 45 15 chr17 11577082 11577148 -83695503 + CT-rich Low_complexity Low_complexity 5 72 0 9 673 283 320 61 0 chr17 11577176 11577282 -83695369 - B1F1 SINE Alu -37 110 1 9 673 1067 72 50 7 chr17 11577636 11577776 -83694875 + B1_Mm SINE Alu 2 147 0 9 673 978 9 0 0 chr17 11577776 11577800 -83694851 + (GAA)n Simple_repeat Simple_repeat 3 26 0 9 673 1271 78 0 11 chr17 11577800 11577982 -83694669 + (GGA)n Simple_repeat Simple_repeat 1 180 0 9 673 978 9 0 0 chr17 11577982 11578070 -83694581 + (GAA)n Simple_repeat Simple_repeat 3 90 0 9 673 396 0 0 0 chr17 11578543 11578587 -83694064 + (CA)n Simple_repeat Simple_repeat 2 45 0 9 673 234 0 0 0 chr17 11580608 11580634 -83692017 + (T)n Simple_repeat Simple_repeat 1 26 0 9 673 1086 253 139 41 chr17 11581891 11582229 -83690422 - MTE2a LTR MaLR -8 371 1 9 673 1228 263 135 16 chr17 11583208 11583637 -83689014 - Lx8 LINE L1 -217 7256 6777 1 673 32 0 0 0 chr17 11584093 11584125 -83688526 + AT_rich Low_complexity Low_complexity 1 32 0 1 673 186 43 0 0 chr17 11584125 11584148 -83688503 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1 673 1262 28 7 0 chr17 11584153 11584295 -83688356 - B1_Mus1 SINE Alu -4 144 2 1 673 258 32 0 0 chr17 11586194 11586225 -83686426 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 673 557 264 54 48 chr17 11586766 11586781 -83685870 - B3A SINE B2 -30 168 155 1 673 297 0 0 0 chr17 11586781 11586814 -83685837 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 673 557 264 54 48 chr17 11586814 11586965 -83685686 - B3A SINE B2 -44 154 1 1 673 270 293 0 0 chr17 11588074 11588207 -83684444 + (TATG)n Simple_repeat Simple_repeat 2 134 0 1 673 350 312 58 22 chr17 11588554 11588777 -83683874 - L1MC4 LINE L1 -409 7633 7403 1 673 339 249 88 108 chr17 11589657 11589693 -83682958 + MLT2B3 LTR ERVL 119 224 -493 1 673 491 307 16 98 chr17 11589693 11589877 -83682774 + MTEa LTR MaLR 28 196 -183 1 673 339 249 88 108 chr17 11589877 11589927 -83682724 + MLT2B3 LTR ERVL 225 381 -336 1 673 21 57 0 0 chr17 11591165 11591200 -83681451 + AT_rich Low_complexity Low_complexity 1 35 0 1 673 351 0 0 0 chr17 11591967 11592006 -83680645 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1 673 1036 67 90 0 chr17 11592536 11592670 -83679981 + B1_Mus2 SINE Alu 2 147 0 1 673 35 0 0 0 chr17 11592671 11592706 -83679945 + AT_rich Low_complexity Low_complexity 1 35 0 1 673 230 0 0 32 chr17 11592811 11592842 -83679809 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1 673 1173 140 0 0 chr17 11594003 11594233 -83678418 + (CA)n Simple_repeat Simple_repeat 1 230 0 1 673 1244 35 23 4 chr17 11594935 11595195 -83677456 + (CA)n Simple_repeat Simple_repeat 1 265 0 1 673 794 277 164 55 chr17 11596682 11597529 -83675122 + L1MA8 LINE L1 4814 5761 -551 1 673 329 177 0 16 chr17 11597604 11597667 -83674984 + HAL1-3A_ME LINE L1 1957 2018 -840 1 673 262 276 97 69 chr17 11597854 11597998 -83674653 + L1MA8 LINE L1 6139 6286 -5 1 673 1101 166 64 32 chr17 11599173 11599391 -83673260 + URR1B DNA MER1_type 1 225 0 1 673 1118 240 77 77 chr17 11599442 11599821 -83672830 - MTE2b LTR MaLR 0 379 1 1 673 358 281 170 26 chr17 11599953 11600223 -83672428 + Charlie7 DNA MER1_type 440 748 -1864 1 673 651 121 16 4 chr17 11601745 11601867 -83670784 - L1_Mm LINE L1 -4045 1802 1666 1 673 930 83 0 8 chr17 11601931 11602052 -83670599 + L1Md_F2 LINE L1 5467 5586 -297 1 673 8002 62 18 4 chr17 11602053 11603034 -83669617 + L1Md_F2 LINE L1 5588 6582 0 1 673 248 215 121 15 chr17 11605404 11605470 -83667181 + L1MCc LINE L1 801 873 -5550 1 673 2219 99 13 3 chr17 11605648 11605963 -83666688 - ORR1A2 LTR MaLR -9 318 1 1 673 580 270 5 15 chr17 11605971 11606132 -83666519 + B3 SINE B2 34 188 -10 1 673 544 280 7 14 chr17 11606254 11606399 -83666252 - B1F1 SINE Alu -2 147 4 1 673 336 24 0 0 chr17 11607897 11607938 -83664713 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 673 308 250 0 0 chr17 11607968 11608048 -83664603 + (TG)n Simple_repeat Simple_repeat 1 80 0 1 673 660 234 8 0 chr17 11608387 11608511 -83664140 + B3A SINE B2 2 126 -72 1 673 186 71 0 0 chr17 11608521 11608549 -83664102 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 673 186 71 0 0 chr17 11608586 11608614 -83664037 + (A)n Simple_repeat Simple_repeat 1 28 0 1 673 185 0 0 39 chr17 11609260 11609286 -83663365 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 1 673 191 261 21 21 chr17 11609957 11610004 -83662647 + L3b LINE CR1 172 218 -264 1 673 305 266 139 48 chr17 11610805 11610971 -83661680 - Tigger15a DNA TcMar -252 463 283 1 673 492 72 0 0 chr17 11611256 11611325 -83661326 + (TG)n Simple_repeat Simple_repeat 1 69 0 1 673 542 328 24 76 chr17 11611327 11611617 -83661034 - B4 SINE B4 -14 278 4 1 673 398 219 65 28 chr17 11612272 11612380 -83660271 - L1MA6 LINE L1 -30 6270 6159 1 673 2007 113 115 14 chr17 11612381 11612677 -83659974 - ORR1A2 LTR MaLR -1 326 1 1 673 914 151 20 7 chr17 11613098 11613245 -83659406 - B1_Mur4 SINE Alu -1 149 1 1 673 236 207 0 33 chr17 11613470 11613530 -83659121 + G-rich Low_complexity Low_complexity 5 62 0 1 673 889 226 107 5 chr17 11614960 11615156 -83657495 - B3 SINE B2 0 216 1 1 673 288 0 0 0 chr17 11616108 11616140 -83656511 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 673 7780 72 11 2 chr17 11616145 11617701 -83654950 - L1_Mus1 LINE L1 0 6567 4998 1 673 5189 87 26 1 chr17 11617684 11618137 -83654514 + L1_Mm LINE L1 4281 4734 -1149 1 673 249 33 0 0 chr17 11618137 11618167 -83654484 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1 673 5189 87 26 1 chr17 11618167 11618436 -83654215 + L1_Mm LINE L1 4735 5020 -863 1 673 3223 66 5 15 chr17 11618855 11619255 -83653396 + MTA_Mm LTR MaLR 1 396 0 1 673 21 57 0 0 chr17 11619485 11619520 -83653131 + AT_rich Low_complexity Low_complexity 1 35 0 1 673 307 343 0 0 chr17 11620645 11620744 -83651907 + (TG)n Simple_repeat Simple_repeat 2 100 0 1 673 411 112 34 0 chr17 11620908 11620997 -83651654 + (TA)n Simple_repeat Simple_repeat 1 92 0 1 673 279 0 0 0 chr17 11621003 11621034 -83651617 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 673 593 314 54 21 chr17 11622277 11622557 -83650094 + B4 SINE B4 1 289 -3 1 673 7151 56 10 2 chr17 11622756 11623651 -83649000 - L1Md_F2 LINE L1 0 6582 5681 1 673 616 300 89 13 chr17 11624348 11624584 -83648067 - MER68 LTR ERVL -305 258 5 1 673 1965 82 4 0 chr17 11624739 11624995 -83647656 - RLTR1B LTR ERV1 0 512 256 1 673 2348 31 28 0 chr17 11624994 11625285 -83647366 - RLTR1B LTR ERV1 -207 305 7 1 673 302 237 20 30 chr17 11625321 11625421 -83647230 + (TG)n Simple_repeat Simple_repeat 2 100 0 1 673 390 74 0 0 chr17 11626265 11626319 -83646332 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 673 29 70 0 0 chr17 11626417 11626474 -83646177 + AT_rich Low_complexity Low_complexity 1 57 0 1 673 336 77 0 0 chr17 11627286 11627338 -83645313 + (TAAA)n Simple_repeat Simple_repeat 3 54 0 1 673 523 189 139 0 chr17 11627726 11627848 -83644803 + Lx9 LINE L1 7325 7463 -181 1 673 213 39 0 0 chr17 11627857 11627883 -83644768 + (CAGA)n Simple_repeat Simple_repeat 3 28 0 1 673 714 311 41 11 chr17 11627883 11628150 -83644501 - MER21B LTR ERV1 -578 285 11 1 673 208 271 24 32 chr17 11629046 11629172 -83643479 + (TA)n Simple_repeat Simple_repeat 2 126 0 1 673 21 71 0 0 chr17 11629244 11629286 -83643365 + AT_rich Low_complexity Low_complexity 1 42 0 1 673 690 294 75 22 chr17 11629421 11629689 -83642962 + B4 SINE B4 2 283 -9 1 673 556 116 163 0 chr17 11630276 11630405 -83642246 + Lx9 LINE L1 7495 7644 0 1 673 249 221 103 0 chr17 11631757 11631825 -83640826 - Lx8 LINE L1 -1 7472 7398 1 673 401 124 46 8 chr17 11631861 11631991 -83640660 + (TTG)n Simple_repeat Simple_repeat 2 136 0 1 673 1741 215 106 5 chr17 11632455 11632833 -83639818 - MTD LTR MaLR 0 419 4 1 673 290 226 29 0 chr17 11636792 11636894 -83635757 + Lx9 LINE L1 7478 7582 -62 1 673 512 308 86 45 chr17 11636978 11637199 -83635452 + MLT1G1 LTR MaLR 290 519 -60 1 673 962 211 43 9 chr17 11637212 11637422 -83635229 + L1MA4 LINE L1 5716 5932 -368 1 673 1041 132 149 31 chr17 11638288 11638483 -83634168 + ORR1A2 LTR MaLR 110 327 0 1 673 180 152 0 0 chr17 11638602 11638635 -83634016 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 673 1099 98 28 0 chr17 11638667 11638810 -83633841 + B1_Mus2 SINE Alu 1 147 0 1 673 219 88 0 0 chr17 11638827 11638861 -83633790 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 673 353 226 131 0 chr17 11638913 11638997 -83633654 - B3A SINE B2 -103 95 1 1 673 483 73 0 0 chr17 11639219 11639287 -83633364 + (TC)n Simple_repeat Simple_repeat 1 68 0 1 673 243 0 0 0 chr17 11639287 11639314 -83633337 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 673 1058 215 8 67 chr17 11639413 11639652 -83632999 - URR1B DNA MER1_type 0 225 1 1 673 32 0 0 0 chr17 11640057 11640089 -83632562 + AT_rich Low_complexity Low_complexity 1 32 0 1 673 219 36 0 0 chr17 11640186 11640214 -83632437 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 673 589 317 31 0 chr17 11640214 11640375 -83632276 - B3 SINE B2 -48 168 3 1 673 363 280 10 10 chr17 11640375 11640464 -83632187 - ID_B1 SINE B4 -73 151 70 1 673 567 0 0 0 chr17 11640473 11640536 -83632115 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 673 309 26 0 0 chr17 11640536 11640573 -83632078 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 673 254 322 226 43 chr17 11640637 11640845 -83631806 - B4A SINE B4 -22 270 25 1 673 606 253 76 27 chr17 11642532 11642766 -83629885 + ORR1E LTR MaLR 10 296 -83 1 673 3413 65 0 19 chr17 11642778 11643198 -83629453 - L1_Mus1 LINE L1 0 6567 6156 1 673 325 73 0 0 chr17 11643198 11643239 -83629412 + L1_Mus1 LINE L1 5843 5883 -684 1 673 234 260 0 0 chr17 11643269 11643319 -83629332 + ORR1E LTR MaLR 313 362 -17 1 673 735 272 25 8 chr17 11645240 11645481 -83627170 - RCHARR1 DNA MER1_type -5 969 725 1 673 1564 266 86 0 chr17 11645528 11645946 -83626705 - RCHARR1 DNA MER1_type -465 509 56 1 673 342 269 134 59 chr17 11646514 11646700 -83625951 - MTEa LTR MaLR -177 202 3 1 673 757 264 25 0 chr17 11646757 11646920 -83625731 + B3A SINE B2 2 168 -30 1 673 687 25 0 0 chr17 11646923 11647004 -83625647 + (CA)n Simple_repeat Simple_repeat 1 81 0 1 673 27 0 0 0 chr17 11647004 11647031 -83625620 + AT_rich Low_complexity Low_complexity 1 27 0 1 673 231 114 0 0 chr17 11651078 11651113 -83621538 + (A)n Simple_repeat Simple_repeat 1 35 0 1 673 212 257 124 71 chr17 11651764 11651877 -83620774 - PB1D9 SINE Alu -1 119 1 1 673 1038 182 136 5 chr17 11652153 11652352 -83620299 - URR1B DNA MER1_type 0 225 1 1 673 349 340 67 0 chr17 11652823 11652856 -83619795 - RMER15 LTR ERVL -40 535 503 1 673 180 77 0 0 chr17 11652856 11652882 -83619769 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 2 673 349 340 67 0 chr17 11652882 11652998 -83619653 - RMER15 LTR ERVL -73 502 377 1 673 336 24 0 0 chr17 11654176 11654217 -83618434 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 673 378 0 0 0 chr17 11654967 11655009 -83617642 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 673 382 291 199 46 chr17 11655029 11655270 -83617381 - B4A SINE B4 -2 290 13 2 673 272 274 35 12 chr17 11656464 11656549 -83616102 + L1MC4 LINE L1 6778 6864 -1178 2 673 283 302 68 81 chr17 11656574 11656808 -83615843 + L1MC4 LINE L1 6993 7223 -819 2 673 431 320 0 0 chr17 11656914 11657014 -83615637 + B1F1 SINE Alu 10 109 -40 2 673 317 47 62 0 chr17 11658364 11658428 -83614223 + (TTG)n Simple_repeat Simple_repeat 1 68 0 2 673 2430 240 141 92 chr17 11660300 11661560 -83611091 - RMER12 LTR ERVK 0 1322 1 2 673 574 252 29 15 chr17 11661948 11661994 -83610657 + ID_B1 SINE B4 84 131 -93 2 673 330 91 0 0 chr17 11661994 11662049 -83610602 + (CAGA)n Simple_repeat Simple_repeat 2 56 0 2 673 574 252 29 15 chr17 11662049 11662139 -83610512 + ID_B1 SINE B4 132 222 -2 2 673 333 296 48 17 chr17 11663720 11663950 -83608701 + L1MEc LINE L1 2246 2482 -3918 2 673 1710 289 120 18 chr17 11664363 11665401 -83607250 + L1MEc LINE L1 2721 3864 -2455 2 674 357 24 0 0 chr17 11665454 11665496 -83607155 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 674 228 167 0 23 chr17 11665633 11665676 -83606975 - FordPrefect DNA Tip100 -315 1368 1327 2 674 1030 259 144 16 chr17 11665699 11666142 -83606509 + L1MEc LINE L1 4429 4928 -1391 2 674 4107 158 22 83 chr17 11666181 11667037 -83605614 - RLTR40 LTR ERVK -7 810 7 2 674 1022 89 19 6 chr17 11667040 11667198 -83605453 + RMER6A LTR ERVK 2 161 -595 2 674 390 320 28 55 chr17 11667210 11667392 -83605259 + L1MC1 LINE L1 6157 6333 0 2 674 22 0 0 0 chr17 11667475 11667497 -83605154 + AT_rich Low_complexity Low_complexity 1 22 0 2 674 345 82 0 0 chr17 11668018 11668067 -83604584 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 674 225 0 0 0 chr17 11669163 11669188 -83603463 + (T)n Simple_repeat Simple_repeat 1 25 0 2 674 235 304 73 88 chr17 11670537 11670674 -83601977 - MTEb LTR MaLR -42 337 203 2 674 216 167 0 0 chr17 11670917 11670965 -83601686 + (TGAA)n Simple_repeat Simple_repeat 1 48 0 2 674 240 281 15 30 chr17 11671254 11671320 -83601331 + ID4_ SINE ID 6 70 -13 2 674 1348 178 155 17 chr17 11672568 11672605 -83600046 + MTD LTR MaLR 24 56 -363 2 674 3297 53 2 2 chr17 11672605 11673001 -83599650 + MTA_Mm LTR MaLR 1 396 0 2 674 1348 178 155 17 chr17 11673001 11673311 -83599340 + MTD LTR MaLR 57 419 0 2 674 237 33 0 0 chr17 11673389 11673419 -83599232 + (CATA)n Simple_repeat Simple_repeat 3 32 0 2 674 201 159 0 0 chr17 11673443 11673487 -83599164 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 674 266 286 22 0 chr17 11674369 11674460 -83598191 - L1M3 LINE L1 -1860 4280 4188 2 674 24 0 0 0 chr17 11675343 11675367 -83597284 + AT_rich Low_complexity Low_complexity 1 24 0 2 674 627 14 0 0 chr17 11675445 11675517 -83597134 + (CA)n Simple_repeat Simple_repeat 2 73 0 2 674 267 31 0 0 chr17 11676254 11676286 -83596365 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 674 281 93 0 18 chr17 11677522 11677577 -83595074 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 2 674 643 206 0 11 chr17 11678282 11678459 -83594192 + CT-rich Low_complexity Low_complexity 3 177 0 2 674 2457 170 134 99 chr17 11680484 11681079 -83591572 - RLTR18 LTR ERVK 0 616 1 2 674 5278 59 3 9 chr17 11681443 11682123 -83590528 + L1_Mus3 LINE L1 5963 6638 0 2 674 429 20 0 0 chr17 11682292 11682342 -83590309 + (GA)n Simple_repeat Simple_repeat 2 51 0 2 674 825 272 212 27 chr17 11682757 11683195 -83589456 + LTR40a LTR ERVL 1 519 0 2 674 1910 143 96 55 chr17 11683746 11684109 -83588542 + ORR1C1 LTR MaLR 1 378 0 2 674 986 258 31 27 chr17 11684947 11685206 -83587445 - MTE2b LTR MaLR -7 372 113 2 674 189 0 0 0 chr17 11685455 11685476 -83587175 + (CAA)n Simple_repeat Simple_repeat 1 21 0 2 674 38794 29 1 0 chr17 11686411 11693265 -83579386 - L1Md_T LINE L1 0 6585 1 2 674 443 143 0 0 chr17 11693849 11693933 -83578718 + B3A SINE B2 5 88 -128 2 674 263 285 157 68 chr17 11693933 11693996 -83578655 + RSINE1 SINE B4 6 165 0 2 674 262 344 20 40 chr17 11694443 11694543 -83578108 + RSINE1 SINE B4 44 141 -24 2 674 306 0 0 0 chr17 11694574 11694608 -83578043 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 674 458 247 85 37 chr17 11696377 11696541 -83576110 - B3A SINE B2 -26 172 1 2 674 200 244 0 25 chr17 11697283 11697363 -83575288 + (TATATG)n Simple_repeat Simple_repeat 4 81 0 2 674 505 280 37 146 chr17 11697389 11697611 -83575040 - B4 SINE B4 -4 288 93 2 674 990 236 24 0 chr17 11697611 11697819 -83574832 - B3 SINE B2 0 216 4 2 674 505 280 37 146 chr17 11697819 11697918 -83574733 - B4 SINE B4 -200 92 2 2 674 205 156 0 72 chr17 11699045 11699114 -83573537 + T-rich Low_complexity Low_complexity 2 65 0 2 674 242 319 19 83 chr17 11699585 11699742 -83572909 - MIR SINE MIR -111 151 5 2 674 385 314 195 26 chr17 11700127 11700434 -83572217 - MTEa LTR MaLR -20 359 1 2 674 3461 123 4 6 chr17 11700956 11701487 -83571164 - Lx2 LINE L1 -1 6996 6467 2 674 1866 109 17 14 chr17 11701489 11701777 -83570874 + Lx2 LINE L1 6175 6463 -534 2 674 371 39 39 0 chr17 11704561 11704613 -83568038 + (TATG)n Simple_repeat Simple_repeat 3 56 0 2 674 416 135 14 0 chr17 11706429 11706503 -83566148 + (TA)n Simple_repeat Simple_repeat 1 75 0 2 674 357 256 44 0 chr17 11706516 11706606 -83566045 + B3A SINE B2 40 133 -65 2 674 23 33 0 0 chr17 11706667 11706697 -83565954 + AT_rich Low_complexity Low_complexity 1 30 0 2 674 21 36 0 0 chr17 11707795 11707823 -83564828 + AT_rich Low_complexity Low_complexity 1 28 0 2 674 577 207 232 0 chr17 11708135 11708299 -83564352 - B3 SINE B2 -14 202 1 2 674 242 314 24 40 chr17 11708439 11708565 -83564086 - Lx9 LINE L1 -160 7484 7361 2 674 234 128 0 0 chr17 11710582 11710621 -83562030 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 674 393 39 0 0 chr17 11711123 11711174 -83561477 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 674 246 109 62 0 chr17 11711276 11711340 -83561311 + (CAGAGA)n Simple_repeat Simple_repeat 5 72 0 2 674 525 32 0 0 chr17 11712146 11712209 -83560442 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 2 674 186 43 0 0 chr17 11712831 11712854 -83559797 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 674 29 0 0 0 chr17 11713479 11713508 -83559143 + AT_rich Low_complexity Low_complexity 1 29 0 2 674 397 212 12 0 chr17 11714054 11714139 -83558512 + BC1_Mm scRNA scRNA 2 87 -65 2 674 517 189 0 2 chr17 11714305 11714418 -83558233 + L1_Mur3 LINE L1 4528 4659 -1484 2 674 283 132 32 21 chr17 11714419 11714512 -83558139 + (CA)n Simple_repeat Simple_repeat 1 94 0 2 674 426 20 0 0 chr17 11714531 11714582 -83558069 + (GA)n Simple_repeat Simple_repeat 2 52 0 2 674 1673 209 23 11 chr17 11714582 11714936 -83557715 + L1_Mur3 LINE L1 4641 4998 -882 2 674 551 53 0 13 chr17 11715122 11715198 -83557453 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 2 674 1489 201 207 92 chr17 11716455 11716893 -83555758 + MT2A LTR ERVL 1 493 -40 2 674 816 111 0 0 chr17 11716893 11717019 -83555632 + (TAGA)n Simple_repeat Simple_repeat 4 129 0 2 674 1489 201 207 92 chr17 11717019 11717058 -83555593 + MT2A LTR ERVL 494 533 0 2 674 450 0 0 0 chr17 11717578 11717628 -83555023 + (GGGGA)n Simple_repeat Simple_repeat 2 51 0 2 674 482 0 0 17 chr17 11717629 11717688 -83554963 + (GGAA)n Simple_repeat Simple_repeat 3 60 0 2 674 1228 61 9 0 chr17 11717691 11717922 -83554729 + (GAAA)n Simple_repeat Simple_repeat 1 232 0 2 674 248 275 32 40 chr17 11719248 11719373 -83553278 + Charlie1 DNA MER1_type 2579 2702 -79 2 674 279 0 0 0 chr17 11719616 11719647 -83553004 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 674 1147 69 0 0 chr17 11719649 11719793 -83552858 + B1_Mus1 SINE Alu 1 144 -4 2 674 186 43 0 0 chr17 11719799 11719822 -83552829 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2 674 497 16 16 0 chr17 11720986 11721048 -83551603 + (TC)n Simple_repeat Simple_repeat 2 64 0 2 674 513 0 0 0 chr17 11721048 11721104 -83551547 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 674 791 275 105 0 chr17 11721115 11721344 -83551307 - B4A SINE B4 -39 253 1 2 674 706 212 5 96 chr17 11721460 11721658 -83550993 + B3A SINE B2 17 196 -20 2 674 1121 260 64 23 chr17 11721661 11722004 -83550647 - Lx8 LINE L1 -945 6528 6172 2 674 314 295 0 6 chr17 11722004 11722178 -83550473 + (TG)n Simple_repeat Simple_repeat 1 173 0 2 674 251 224 0 13 chr17 11723947 11724024 -83548627 + (TG)n Simple_repeat Simple_repeat 1 76 0 2 674 490 294 138 46 chr17 11724235 11724668 -83547983 - L1MB5 LINE L1 -103 6080 5589 2 674 465 248 0 0 chr17 11724771 11724872 -83547779 + B1F SINE Alu 42 142 -7 2 674 240 35 0 0 chr17 11724888 11724917 -83547734 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2 674 277 291 85 16 chr17 11725455 11725584 -83547067 - MLT1A1 LTR MaLR 0 408 271 2 674 461 240 243 67 chr17 11726670 11726983 -83545668 - RLTR9A LTR ERVK 0 368 1 2 674 227 130 0 18 chr17 11727591 11727646 -83545005 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 2 674 949 247 135 47 chr17 11728385 11728725 -83543926 - ORR1D2 LTR MaLR 0 370 1 2 674 1206 55 0 7 chr17 11729447 11729594 -83543057 + B1_Mus1 SINE Alu 2 147 -1 2 674 222 250 0 19 chr17 11730240 11730293 -83542358 + (CATATA)n Simple_repeat Simple_repeat 4 55 0 2 674 267 327 58 0 chr17 11730294 11730398 -83542253 - Tigger5 DNA MER2_type -9 2397 2288 2 674 458 326 14 0 chr17 11730423 11730561 -83542090 - Tigger5 DNA MER2_type -2218 188 49 2 674 518 79 0 13 chr17 11730574 11730651 -83542000 + (TA)n Simple_repeat Simple_repeat 1 76 0 2 674 246 143 48 0 chr17 11730690 11730753 -83541898 + (TA)n Simple_repeat Simple_repeat 1 66 0 2 674 523 255 108 0 chr17 11730994 11731151 -83541500 + B3A SINE B2 4 177 -21 2 674 1430 40 62 0 chr17 11731419 11731596 -83541055 + B2_Mm2 SINE B2 1 188 -7 2 674 506 259 21 22 chr17 11732506 11732674 -83539977 - B3A SINE B2 -18 198 32 2 674 357 264 99 9 chr17 11732742 11732853 -83539798 - PB1 SINE Alu -2 125 5 3 674 2073 123 96 22 chr17 11733385 11733791 -83538860 - RMER6B LTR ERVK 0 461 26 3 674 341 267 0 0 chr17 11733961 11734036 -83538615 - ID4_ SINE ID -1 82 8 3 674 228 279 49 113 chr17 11734304 11734551 -83538100 - L1MD LINE L1 -836 5523 5293 3 674 288 239 25 5 chr17 11737580 11737792 -83534859 + (CCCTAA)n Simple_repeat Simple_repeat 1 216 0 3 674 1984 264 74 10 chr17 11738646 11739239 -83533412 - Lx8 LINE L1 -432 7041 6411 3 674 286 301 31 31 chr17 11739429 11739556 -83533095 - MLT1A LTR MaLR -247 127 1 3 674 1161 275 37 12 chr17 11740197 11740525 -83532126 - MTEa LTR MaLR -43 336 1 3 674 434 296 50 6 chr17 11741927 11742107 -83530544 + Charlie25 DNA MER1_type 695 882 -1642 3 674 274 266 0 15 chr17 11743474 11743539 -83529112 + PB1D10 SINE Alu 16 79 -38 3 674 1635 26 5 0 chr17 11749924 11750114 -83522537 + B2_Mm1t SINE B2 2 192 -1 3 674 518 241 39 20 chr17 11750151 11750332 -83522319 + RMER12 LTR ERVK 1093 1216 -106 3 674 346 223 35 112 chr17 11751783 11751899 -83520752 + PB1D7 SINE Alu 8 114 -6 3 674 318 200 0 40 chr17 11753658 11753783 -83518868 + (TG)n Simple_repeat Simple_repeat 1 120 0 3 674 426 140 20 10 chr17 11753782 11753883 -83518768 + GA-rich Low_complexity Low_complexity 1 102 0 3 674 30 0 0 0 chr17 11754031 11754061 -83518590 + AT_rich Low_complexity Low_complexity 1 30 0 3 674 1882 219 71 9 chr17 11754619 11755044 -83517607 + Lx2B LINE L1 6549 6999 -1 3 674 288 0 0 0 chr17 11755541 11755573 -83517078 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 674 253 155 28 14 chr17 11755587 11755659 -83516992 + (CAGAGA)n Simple_repeat Simple_repeat 4 76 0 3 674 340 208 0 20 chr17 11756733 11756831 -83515820 + (TA)n Simple_repeat Simple_repeat 1 96 0 3 674 516 122 0 0 chr17 11756831 11756913 -83515738 + (TG)n Simple_repeat Simple_repeat 1 82 0 3 674 305 0 0 48 chr17 11757609 11757651 -83515000 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 3 674 318 294 22 0 chr17 11759234 11759245 -83513406 + B4A SINE B4 74 86 -206 3 674 381 270 30 6 chr17 11759245 11759392 -83513259 + B1F SINE Alu 1 141 -6 3 674 243 353 28 40 chr17 11759994 11760171 -83512480 - Charlie7 DNA MER1_type -1081 1531 1357 3 674 293 51 0 0 chr17 11760781 11760820 -83511831 - L1_Mus1 LINE L1 -436 6131 6093 3 674 3572 69 0 9 chr17 11760820 11761273 -83511378 + L1_Mus1 LINE L1 6119 6567 0 3 674 287 301 0 14 chr17 11761420 11761494 -83511157 - ID SINE ID -151 73 1 3 674 180 77 0 0 chr17 11761611 11761637 -83511014 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 674 33 0 0 0 chr17 11761892 11761925 -83510726 + AT_rich Low_complexity Low_complexity 1 33 0 3 674 582 246 89 37 chr17 11761968 11762158 -83510493 - RMER30 DNA MER1_type -1 201 2 3 674 996 241 250 38 chr17 11762555 11762966 -83509685 - MT2A LTR ERVL 0 533 36 3 674 468 0 0 0 chr17 11763647 11763699 -83508952 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 674 616 258 31 25 chr17 11763700 11763863 -83508788 - B3A SINE B2 -34 164 1 3 674 186 148 56 0 chr17 11764095 11764149 -83508502 + CT-rich Low_complexity Low_complexity 2 58 0 3 674 235 296 152 22 chr17 11767697 11767835 -83504816 + MER45A DNA Tip100 20 175 -3 3 674 360 0 0 0 chr17 11768092 11768132 -83504519 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 674 751 215 198 28 chr17 11768325 11768608 -83504043 + ORR1D2 LTR MaLR 40 370 0 3 674 938 177 34 29 chr17 11770495 11770699 -83501952 - ORR1D1 LTR MaLR 0 374 170 3 674 561 177 0 0 chr17 11770708 11770821 -83501830 + GA-rich Low_complexity Low_complexity 1 113 0 3 674 913 209 0 11 chr17 11770821 11771005 -83501646 - ORR1D1 LTR MaLR -192 182 1 3 674 182 120 0 0 chr17 11773195 11773220 -83499431 + L4 LINE RTE 85 109 -1920 3 674 483 320 151 19 chr17 11776239 11776497 -83496154 + B4 SINE B4 1 292 0 3 674 385 265 10 19 chr17 11776731 11776835 -83495816 + MER58C DNA MER1_type 2 104 -111 3 674 316 252 165 31 chr17 11777015 11777142 -83495509 + B3A SINE B2 1 144 -54 3 674 252 0 0 0 chr17 11777158 11777186 -83495465 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 674 246 152 76 0 chr17 11779182 11779261 -83493390 + (CATG)n Simple_repeat Simple_repeat 2 86 0 3 674 410 284 7 73 chr17 11779272 11779409 -83493242 - B4 SINE B4 -20 272 145 3 674 1230 238 149 6 chr17 11779970 11780333 -83492318 + MTD LTR MaLR 5 419 0 3 674 253 198 23 0 chr17 11781180 11781266 -83491385 + (TATATG)n Simple_repeat Simple_repeat 3 90 0 3 674 222 261 15 0 chr17 11781270 11781335 -83491316 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 674 259 216 0 48 chr17 11781346 11781492 -83491159 + (TATG)n Simple_repeat Simple_repeat 2 140 0 3 674 347 220 0 90 chr17 11781862 11781962 -83490689 + BC1_Mm scRNA scRNA 8 98 -54 3 674 529 331 30 95 chr17 11782999 11783303 -83489348 - B4A SINE B4 -8 284 1 3 674 483 259 0 0 chr17 11783997 11784136 -83488515 + (TA)n Simple_repeat Simple_repeat 1 139 0 3 674 774 269 46 12 chr17 11785873 11786114 -83486537 - MER2 DNA MER2_type -7 338 90 3 674 303 210 0 0 chr17 11786320 11786382 -83486269 - MER92C LTR ERV1 -2 552 491 3 674 968 158 24 0 chr17 11786975 11787140 -83485511 + RLTR17 LTR ERVK 524 692 0 3 674 2351 160 49 24 chr17 11788302 11788713 -83483938 - MTC LTR MaLR 0 421 1 3 674 828 127 46 103 chr17 11788836 11789011 -83483640 - URR1A DNA MER1_type 0 226 62 3 674 866 274 141 47 chr17 11789450 11789471 -83483180 - MTEa LTR MaLR -6 373 352 3 674 387 89 0 0 chr17 11789471 11789527 -83483124 + (TAA)n Simple_repeat Simple_repeat 2 57 0 3 674 866 274 141 47 chr17 11789527 11789846 -83482805 - MTEa LTR MaLR -28 351 1 3 674 2915 136 129 46 chr17 11790161 11790725 -83481926 - RMER19C LTR ERVK 0 611 1 3 674 210 150 0 0 chr17 11790742 11790782 -83481869 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 3 674 4029 159 42 74 chr17 11790782 11791899 -83480752 - MurERV4_19-int LTR ERVK -27 5753 4760 3 674 507 206 30 15 chr17 11791913 11791934 -83480717 - MurERV4_19-int LTR ERVK -1000 4780 4760 3 674 1211 35 14 0 chr17 11791934 11792079 -83480572 - B1_Mm SINE Alu 0 147 1 3 674 507 206 30 15 chr17 11792079 11792190 -83480461 - MurERV4_19-int LTR ERVK -1021 4759 4647 3 674 793 101 0 16 chr17 11792187 11792308 -83480343 - MurERV4_19-int LTR ERVK -708 5072 4954 3 674 21248 139 45 18 chr17 11792306 11795800 -83476851 - MurERV4_19-int LTR ERVK -2187 3593 5 3 674 3123 168 70 34 chr17 11795803 11796393 -83476258 - RMER19C LTR ERVK 0 611 1 3 675 233 205 232 101 chr17 11797465 11797490 -83475161 - B2_Mm2 SINE B2 -4 191 167 3 675 369 0 0 0 chr17 11797490 11797531 -83475120 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 675 457 205 232 101 chr17 11797531 11797673 -83474978 - B3A SINE B2 -29 166 2 3 675 545 228 73 8 chr17 11797942 11798066 -83474585 + ID_B1 SINE B4 93 224 0 3 675 1775 115 6 72 chr17 11798391 11798710 -83473941 - ORR1A4 LTR MaLR -31 298 1 3 675 30 0 0 0 chr17 11799346 11799376 -83473275 + AT_rich Low_complexity Low_complexity 1 30 0 3 675 570 67 0 0 chr17 11799395 11799470 -83473181 + (TG)n Simple_repeat Simple_repeat 1 75 0 3 675 370 336 9 0 chr17 11799473 11799586 -83473065 - RSINE1 SINE B4 -41 124 11 3 675 302 258 113 91 chr17 11800319 11800549 -83472102 - MER31A LTR ERV1 -104 381 147 3 675 691 109 41 25 chr17 11800598 11800720 -83471931 + URR1A DNA MER1_type 80 203 -23 3 675 2179 171 94 44 chr17 11801852 11802352 -83470299 + RLTR11A2 LTR ERVK 1 525 -2 3 675 225 0 0 0 chr17 11803250 11803275 -83469376 + (T)n Simple_repeat Simple_repeat 1 25 0 3 675 457 181 49 32 chr17 11803473 11803625 -83469026 - B3A SINE B2 -60 156 2 3 675 359 302 7 72 chr17 11803941 11804080 -83468571 + RMER30 DNA MER1_type 65 194 -8 3 675 219 233 13 40 chr17 11805477 11805553 -83467098 + GA-rich Low_complexity Low_complexity 2 75 0 3 675 498 33 0 0 chr17 11805714 11805774 -83466877 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 675 645 14 0 0 chr17 11808366 11808440 -83464211 + (TC)n Simple_repeat Simple_repeat 2 75 0 3 675 300 143 0 0 chr17 11808440 11808510 -83464141 + (CTA)n Simple_repeat Simple_repeat 2 71 0 3 675 1189 264 126 48 chr17 11810278 11810820 -83461831 + L1MA8 LINE L1 5691 6274 -17 3 675 999 262 73 59 chr17 11811541 11811882 -83460769 + MTE2b LTR MaLR 1 346 -33 3 675 485 279 44 44 chr17 11812805 11813030 -83459621 - LTR16D1 LTR ERVL -4 671 447 3 675 259 250 23 45 chr17 11813279 11813367 -83459284 - RMER15 LTR ERVL -87 488 403 3 675 397 370 45 25 chr17 11813504 11813748 -83458903 - Arthur1B DNA Tip100 -429 796 548 3 675 268 254 0 40 chr17 11815357 11815431 -83457220 - MER58A DNA MER1_type -148 76 6 3 675 218 145 0 98 chr17 11815764 11815778 -83456873 - PB1D10 SINE Alu -1 116 106 3 675 408 88 0 0 chr17 11815778 11815835 -83456816 + (TCTTG)n Simple_repeat Simple_repeat 2 58 0 3 675 906 70 0 23 chr17 11815835 11815960 -83456691 - B1_Mus1 SINE Alu -10 138 15 3 675 2210 166 60 8 chr17 11815973 11816373 -83456278 - MTC LTR MaLR 0 421 1 3 675 455 347 76 23 chr17 11817747 11818048 -83454603 - MTEa LTR MaLR -57 322 6 3 675 611 291 9 88 chr17 11818720 11818946 -83453705 - B4 SINE B4 -4 288 81 3 675 213 230 99 66 chr17 11818939 11818973 -83453678 - BC1_Mm scRNA scRNA -25 127 3 3 675 301 193 26 90 chr17 11818973 11819060 -83453591 - B4 SINE B4 -140 84 3 3 675 959 47 0 0 chr17 11819153 11819282 -83453369 - B1_Mus1 SINE Alu 0 148 20 3 675 291 28 0 0 chr17 11820589 11820625 -83452026 + (GAGAA)n Simple_repeat Simple_repeat 5 40 0 3 675 624 116 0 0 chr17 11821152 11821247 -83451404 + (GGAA)n Simple_repeat Simple_repeat 3 97 0 3 675 546 237 0 0 chr17 11821607 11821746 -83450905 + (TG)n Simple_repeat Simple_repeat 2 140 0 3 675 332 373 21 7 chr17 11822845 11822988 -83449663 - MLT1A0 LTR MaLR -32 537 393 3 675 1258 27 7 0 chr17 11823647 11823793 -83448858 + B1_Mus2 SINE Alu 1 147 0 3 675 225 196 0 0 chr17 11823795 11823841 -83448810 + A-rich Low_complexity Low_complexity 1 46 0 3 675 725 341 62 12 chr17 11823870 11824208 -83448443 - MLT1A0 LTR MaLR -2 363 9 3 675 791 201 148 4 chr17 11824319 11824584 -83448067 - ORR1D1 LTR MaLR -32 327 1 4 675 459 15 29 14 chr17 11824731 11824800 -83447851 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 4 675 540 270 103 0 chr17 11825924 11826109 -83446542 + B3 SINE B2 2 205 -11 4 675 1131 265 11 51 chr17 11827042 11827412 -83445239 - ORR1E LTR MaLR -4 355 1 4 675 308 248 98 0 chr17 11828659 11828792 -83443859 - L1M LINE L1 -762 5418 5273 4 675 231 288 49 12 chr17 11828797 11828878 -83443773 + RSINE1 SINE B4 8 91 -74 4 675 486 227 183 23 chr17 11829610 11829741 -83442910 - RSINE1 SINE B4 -13 152 1 4 675 205 138 0 0 chr17 11830311 11830340 -83442311 + (CAA)n Simple_repeat Simple_repeat 2 30 0 4 675 24 0 0 0 chr17 11830976 11831000 -83441651 + AT_rich Low_complexity Low_complexity 1 24 0 4 675 783 249 40 13 chr17 11832068 11832296 -83440355 - MTEb LTR MaLR -5 374 141 4 675 506 272 103 52 chr17 11834064 11834277 -83438374 - RMER15 LTR ERVL -4 571 348 4 675 22 0 0 0 chr17 11834759 11834781 -83437870 + AT_rich Low_complexity Low_complexity 1 22 0 4 675 233 238 140 19 chr17 11835099 11835206 -83437445 - MLT1I LTR MaLR -38 373 254 4 675 731 203 7 0 chr17 11835976 11836114 -83436537 - B1_Mur2 SINE Alu -10 139 1 4 675 294 298 0 11 chr17 11837846 11837941 -83434710 + (TATATG)n Simple_repeat Simple_repeat 6 99 0 4 675 414 0 0 0 chr17 11837997 11838043 -83434608 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 675 358 263 50 0 chr17 11838599 11838624 -83434027 - MLT1B LTR MaLR 0 390 366 4 675 450 0 0 0 chr17 11838624 11838674 -83433977 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 675 358 263 50 0 chr17 11838674 11838747 -83433904 - MLT1B LTR MaLR -25 365 288 4 675 225 271 0 33 chr17 11838748 11838809 -83433842 - MLT1B LTR MaLR -288 102 44 4 675 3017 37 5 50 chr17 11840441 11840839 -83431812 - L1_Mus2 LINE L1 -2 6564 6185 4 675 208 167 121 69 chr17 11841602 11841660 -83430991 - MIRm SINE MIR -105 171 111 4 675 21 0 0 0 chr17 11841975 11841996 -83430655 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 2664 276 62 30 chr17 11842037 11842977 -83429674 - RCHARR1 DNA MER1_type -2 972 3 4 675 183 42 0 0 chr17 11843733 11843757 -83428894 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4 675 314 154 0 0 chr17 11844797 11844849 -83427802 + HAL1-3A_ME LINE L1 1967 2018 -840 4 675 253 253 345 0 chr17 11844947 11845063 -83427588 + RSINE1 SINE B4 10 165 0 4 675 358 89 0 43 chr17 11845076 11845146 -83427505 + (CATA)n Simple_repeat Simple_repeat 4 70 0 4 675 24 0 0 0 chr17 11845153 11845177 -83427474 + AT_rich Low_complexity Low_complexity 1 24 0 4 675 1011 61 0 0 chr17 11846388 11846519 -83426132 + (GGGAGA)n Simple_repeat Simple_repeat 4 134 0 4 675 655 154 26 0 chr17 11847292 11847409 -83425242 + B1_Mus1 SINE Alu 24 143 -5 4 675 737 98 0 9 chr17 11847409 11847522 -83425129 + (GGGGA)n Simple_repeat Simple_repeat 4 115 0 4 675 24 0 0 0 chr17 11848693 11848717 -83423934 + AT_rich Low_complexity Low_complexity 1 24 0 4 675 605 58 0 11 chr17 11849717 11849804 -83422847 + (GGGA)n Simple_repeat Simple_repeat 4 89 0 4 675 627 310 64 109 chr17 11850444 11850802 -83421849 + MER2 DNA MER2_type 1 342 -3 4 675 1017 25 0 0 chr17 11852346 11852466 -83420185 + (TC)n Simple_repeat Simple_repeat 1 120 0 4 675 228 312 61 41 chr17 11852925 11853072 -83419579 + L2 LINE L2 2650 2799 -620 4 675 1860 103 25 121 chr17 11853084 11853448 -83419203 + ORR1A4 LTR MaLR 1 329 0 4 675 212 250 0 0 chr17 11854484 11854528 -83418123 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 675 692 267 21 72 chr17 11855970 11856043 -83416608 - B4A SINE B4 0 292 220 4 675 279 0 0 0 chr17 11856043 11856074 -83416577 + (CTTG)n Simple_repeat Simple_repeat 4 34 0 4 675 692 267 21 72 chr17 11856074 11856194 -83416457 - B4A SINE B4 -73 219 109 4 675 342 0 0 0 chr17 11858422 11858460 -83414191 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 675 432 0 0 0 chr17 11858460 11858507 -83414144 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 675 468 0 0 0 chr17 11859141 11859193 -83413458 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 675 1017 266 44 26 chr17 11859463 11859806 -83412845 - ORR1E LTR MaLR -4 355 7 4 675 1764 184 112 12 chr17 11860472 11860873 -83411778 - RMER10A LTR ERVL 0 442 2 4 675 347 294 134 25 chr17 11861470 11861627 -83411024 - MER2B DNA MER2_type -5 331 158 4 675 671 115 10 0 chr17 11861846 11861950 -83410701 - B2_Mm2 SINE B2 -71 124 20 4 675 342 0 0 0 chr17 11862405 11862443 -83410208 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 675 253 280 27 0 chr17 11863604 11863679 -83408972 + MTEa LTR MaLR 281 357 -22 4 675 820 120 88 22 chr17 11864469 11864605 -83408046 - B1_Mus1 SINE Alu 0 148 4 4 675 387 297 44 25 chr17 11864683 11864842 -83407809 + Charlie19a DNA Charlie 71 232 -154 4 675 210 91 0 0 chr17 11864860 11864893 -83407758 + (A)n Simple_repeat Simple_repeat 1 33 0 4 675 336 48 0 0 chr17 11865598 11865640 -83407011 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 675 1131 119 14 65 chr17 11866013 11866229 -83406422 + RMER17A LTR ERVK 547 751 0 4 675 191 204 19 0 chr17 11867356 11867410 -83405241 + (TATATG)n Simple_repeat Simple_repeat 6 60 0 4 675 1206 269 18 11 chr17 11867447 11867732 -83404919 - B4 SINE B4 -2 290 4 4 675 729 161 400 15 chr17 11869053 11869322 -83403329 + ORR1D1 LTR MaLR 2 374 0 4 675 524 195 34 34 chr17 11869900 11870017 -83402634 + B1F SINE Alu 24 140 -9 4 675 700 182 11 17 chr17 11870030 11870209 -83402442 + GA-rich Low_complexity Low_complexity 3 180 0 4 675 28 71 0 0 chr17 11870287 11870343 -83402308 + AT_rich Low_complexity Low_complexity 1 56 0 4 675 2067 157 82 8 chr17 11870484 11870875 -83401776 - MTC LTR MaLR -1 420 1 4 675 1861 206 50 97 chr17 11871325 11871901 -83400750 + RMER15 LTR ERVL 22 570 -5 4 675 398 143 0 13 chr17 11872183 11872261 -83400390 + (TA)n Simple_repeat Simple_repeat 2 78 0 4 675 256 317 186 14 chr17 11872281 11872694 -83399957 - Helitron1Na_Mam RC Helitron -420 642 159 4 675 568 296 79 0 chr17 11873166 11873355 -83399296 + B4A SINE B4 1 204 -88 4 675 198 250 0 0 chr17 11874654 11874694 -83397957 - MIRm SINE MIR -21 255 216 4 675 1162 181 27 14 chr17 11875748 11875967 -83396684 + URR1A DNA MER1_type 2 223 -3 4 675 297 0 0 0 chr17 11876054 11876087 -83396564 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 675 312 354 110 25 chr17 11877633 11877960 -83394691 + L1M5 LINE L1 5412 5766 -474 4 675 801 63 0 0 chr17 11878162 11878273 -83394378 + B1_Mus1 SINE Alu 38 148 0 4 675 1394 45 0 6 chr17 11878610 11878789 -83393862 + (TCTCCC)n Simple_repeat Simple_repeat 3 180 0 4 675 828 159 18 6 chr17 11878790 11878961 -83393690 + CT-rich Low_complexity Low_complexity 3 175 0 4 675 192 77 0 0 chr17 11878978 11879004 -83393647 + (TGGA)n Simple_repeat Simple_repeat 3 28 0 4 675 189 0 0 0 chr17 11879962 11879983 -83392668 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 675 345 140 0 0 chr17 11879983 11880040 -83392611 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 675 378 0 0 0 chr17 11881304 11881346 -83391305 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 675 436 254 8 8 chr17 11881552 11881671 -83390980 + ORR1E LTR MaLR 1 119 -240 4 675 1939 139 18 27 chr17 11881851 11882183 -83390468 + ORR1A4 LTR MaLR 1 329 0 4 675 2609 58 32 3 chr17 11882455 11882798 -83389853 - L1Md_F2 LINE L1 -12 6570 6218 4 675 1901 165 74 19 chr17 11883235 11883612 -83389039 - RMER10B LTR ERVL 0 398 1 4 675 1542 300 67 47 chr17 11883654 11884455 -83388196 + Lx8 LINE L1 6655 7471 -2 4 675 703 279 67 100 chr17 11885476 11885985 -83386666 - Lx8 LINE L1 0 7473 6982 4 675 235 135 0 37 chr17 11886176 11886230 -83386421 - RMER2 LTR ERV1 -29 538 487 4 675 421 288 40 34 chr17 11886656 11886832 -83385819 - MLT1A1 LTR MaLR -3 405 229 4 675 438 285 154 9 chr17 11887665 11887879 -83384772 + MER21B LTR ERV1 499 743 -120 4 675 859 299 49 21 chr17 11888130 11888455 -83384196 + MTE2a LTR MaLR 2 335 -44 4 675 268 314 71 38 chr17 11888623 11888861 -83383790 - RLTR12B LTR ERVK -82 446 201 4 675 723 263 40 33 chr17 11888829 11889104 -83383547 - RLTR12B LTR ERVK -229 299 23 4 675 180 200 0 0 chr17 11889878 11889923 -83382728 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 675 746 253 5 46 chr17 11889934 11890129 -83382522 - B4 SINE B4 0 292 106 4 675 251 276 20 0 chr17 11890746 11890820 -83381831 - MER33 DNA MER1_type -251 73 1 4 675 2333 282 97 49 chr17 11891360 11892291 -83380360 - Lx8 LINE L1 -84 7389 6415 4 675 1097 294 33 38 chr17 11892283 11892999 -83379652 - Lx8 LINE L1 -1184 6289 5545 4 675 256 253 32 21 chr17 11894048 11894141 -83378510 + CT-rich Low_complexity Low_complexity 2 95 0 4 675 378 0 0 0 chr17 11894144 11894186 -83378465 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 675 721 300 40 89 chr17 11894206 11894510 -83378141 - B4 SINE B4 -2 290 2 4 675 1122 69 0 14 chr17 11895617 11895764 -83376887 - B1_Mus2 SINE Alu -1 146 2 4 675 303 287 77 63 chr17 11896497 11896847 -83375804 - L1M4 LINE L1 -783 5363 5009 4 675 446 293 17 125 chr17 11896847 11897206 -83375445 - L1MB3 LINE L1 -1 6182 5863 4 675 694 278 77 0 chr17 11897361 11897555 -83375096 - B3 SINE B2 -5 211 3 4 675 23 0 0 0 chr17 11899022 11899045 -83373606 + AT_rich Low_complexity Low_complexity 1 23 0 4 675 21 0 0 0 chr17 11899700 11899721 -83372930 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 24 0 0 0 chr17 11899832 11899856 -83372795 + AT_rich Low_complexity Low_complexity 1 24 0 4 675 495 0 0 0 chr17 11900348 11900403 -83372248 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 675 692 318 101 64 chr17 11900404 11901882 -83370769 - L1ME2 LINE L1 -102 6077 4525 5 675 1756 179 96 17 chr17 11903407 11903760 -83368891 + Lx5 LINE L1 6670 7050 0 5 675 942 71 79 0 chr17 11907533 11907659 -83364992 + B1_Mus2 SINE Alu 2 137 -10 5 675 516 300 133 4 chr17 11910007 11910255 -83362396 - MER82 DNA MER2_type -303 350 71 5 675 757 190 44 0 chr17 11910326 11910463 -83362188 + B1_Mus2 SINE Alu 1 143 -4 5 675 189 0 0 0 chr17 11910465 11910486 -83362165 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 5 675 750 129 29 8 chr17 11911142 11911392 -83361259 + (TAGA)n Simple_repeat Simple_repeat 1 255 0 5 675 519 60 0 0 chr17 11914272 11914339 -83358312 + (TAGA)n Simple_repeat Simple_repeat 3 69 0 5 675 5577 57 1 10 chr17 11916198 11916903 -83355748 - L1Md_F2 LINE L1 -1 6581 5883 5 675 191 36 0 35 chr17 11916932 11916961 -83355690 + (TC)n Simple_repeat Simple_repeat 2 29 0 5 675 280 163 10 30 chr17 11918191 11918292 -83354359 + T-rich Low_complexity Low_complexity 2 100 0 5 675 201 288 25 12 chr17 11918839 11918920 -83353731 + (TATATG)n Simple_repeat Simple_repeat 5 86 0 5 675 252 343 54 34 chr17 11919199 11919347 -83353304 - MIR SINE MIR -105 157 7 5 675 1046 270 48 12 chr17 11920172 11920506 -83352145 + RMER5 LTR ERV1 174 519 -15 5 675 1350 247 40 21 chr17 11920703 11921075 -83351576 - MTE2b LTR MaLR 0 379 1 5 675 336 178 38 82 chr17 11921118 11921231 -83351420 - B1F SINE Alu 0 149 53 5 675 260 212 120 56 chr17 11921814 11921939 -83350712 - RMER5 LTR ERV1 -354 180 48 5 675 384 289 39 44 chr17 11922100 11922207 -83350444 + Lx9 LINE L1 7316 7429 -215 5 675 1356 172 272 3 chr17 11922207 11922505 -83350146 + ORR1C1 LTR MaLR 1 378 0 5 675 384 289 39 44 chr17 11922505 11922600 -83350051 + Lx9 LINE L1 7430 7517 -127 5 675 670 203 8 0 chr17 11922604 11922862 -83349789 + (TG)n Simple_repeat Simple_repeat 1 260 0 5 675 21 71 0 0 chr17 11923010 11923052 -83349599 + AT_rich Low_complexity Low_complexity 1 42 0 5 675 459 0 0 0 chr17 11926393 11926444 -83346207 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 675 803 173 12 0 chr17 11926536 11926698 -83345953 + GA-rich Low_complexity Low_complexity 2 165 0 5 675 225 258 80 101 chr17 11926950 11926989 -83345662 + ID_B1 SINE B4 80 180 -44 5 675 230 228 11 102 chr17 11926989 11927077 -83345574 + B1F SINE Alu 41 120 -29 5 675 225 258 80 101 chr17 11927077 11927088 -83345563 + ID_B1 SINE B4 181 214 -10 5 675 382 322 16 8 chr17 11927169 11927291 -83345360 + ID_B1 SINE B4 81 203 -21 5 84 1029 200 109 27 chr17 11927328 11927696 -83344955 + RLTR26 LTR ERVK 5 435 -207 5 676 444 261 9 9 chr17 11927708 11927820 -83344831 + RLTR26 LTR ERVK 531 642 0 5 676 268 286 0 0 chr17 11927820 11927883 -83344768 + GA-rich Low_complexity Low_complexity 1 63 0 5 676 850 301 90 15 chr17 11928024 11928358 -83344293 - MLT1A0 LTR MaLR -6 359 1 5 676 369 116 0 0 chr17 11928993 11929062 -83343589 + (TC)n Simple_repeat Simple_repeat 1 69 0 5 676 1444 179 85 40 chr17 11929203 11929557 -83343094 - ORR1D1 LTR MaLR 0 374 5 5 676 886 133 37 0 chr17 11929847 11929982 -83342669 - B1_Mus1 SINE Alu -7 141 2 5 676 2051 104 93 15 chr17 11934033 11934366 -83338285 - RLTR15 LTR ERVK 0 359 1 5 676 33 0 0 0 chr17 11934786 11934819 -83337832 + AT_rich Low_complexity Low_complexity 1 33 0 5 676 525 210 245 13 chr17 11935942 11936101 -83336550 + B3A SINE B2 2 197 -1 5 676 341 227 124 11 chr17 11936599 11936688 -83335963 + PB1 SINE Alu 27 125 -2 5 676 229 342 0 0 chr17 11936698 11936771 -83335880 + ID4_ SINE ID 2 74 -9 5 676 269 226 97 0 chr17 11937038 11937100 -83335551 - L2 LINE L2 -954 2465 2398 5 676 216 97 0 0 chr17 11940550 11940581 -83332070 + (CAT)n Simple_repeat Simple_repeat 2 32 0 5 676 340 372 51 6 chr17 11940608 11940765 -83331886 - RSINE1 SINE B4 -1 164 1 5 676 423 0 0 0 chr17 11940875 11940922 -83331729 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 676 186 143 0 0 chr17 11942372 11942407 -83330244 + (TCCC)n Simple_repeat Simple_repeat 4 38 0 5 676 386 333 99 21 chr17 11942906 11943145 -83329506 - MLT1G3 LTR MaLR -302 293 38 5 676 3087 20 0 3 chr17 11943155 11943502 -83329149 - ORR1A0 LTR MaLR 0 346 1 5 676 774 261 15 45 chr17 11945984 11946185 -83326466 + B4 SINE B4 82 276 -16 5 676 333 0 0 0 chr17 11946748 11946785 -83325866 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 676 414 0 0 0 chr17 11946785 11946830 -83325821 + (GA)n Simple_repeat Simple_repeat 2 47 0 5 676 39517 35 7 1 chr17 11947372 11953456 -83319195 - L1Md_T LINE L1 0 6582 483 5 676 696 202 25 9 chr17 11953584 11953855 -83318796 - ORR1B1 LTR MaLR -218 176 1 5 676 287 299 44 53 chr17 11954254 11954367 -83318284 - PB1D10 SINE Alu -2 115 4 5 676 1671 167 105 12 chr17 11954391 11954725 -83317926 + ORR1C1 LTR MaLR 1 365 -13 5 676 248 292 10 0 chr17 11955039 11955063 -83317588 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 676 668 43 11 0 chr17 11955063 11955155 -83317496 + (TCTA)n Simple_repeat Simple_repeat 2 94 0 5 676 248 292 10 0 chr17 11955155 11955226 -83317425 + (TG)n Simple_repeat Simple_repeat 1 72 0 5 676 465 306 44 44 chr17 11955227 11955408 -83317243 - B3A SINE B2 -15 201 21 5 676 185 59 59 0 chr17 11955607 11955641 -83317010 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 5 676 1057 115 0 0 chr17 11955652 11955800 -83316851 - B1_Mus1 SINE Alu 0 148 1 5 676 537 259 106 30 chr17 11955820 11956122 -83316529 + Tigger13a DNA MER2_type 185 509 -262 5 676 721 289 5 34 chr17 11956122 11956209 -83316442 + ID SINE ID 2 82 -142 5 676 231 338 60 67 chr17 11956209 11956358 -83316293 + B1F2 SINE Alu 1 148 -1 5 676 1382 97 0 5 chr17 11956554 11956741 -83315910 - B2_Mm1a SINE B2 -4 189 4 5 676 455 0 18 0 chr17 11959241 11959296 -83313355 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 676 414 0 0 0 chr17 11959296 11959341 -83313310 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 676 193 318 0 0 chr17 11962424 11962468 -83310183 + MIR3 SINE MIR 141 184 -24 5 676 364 304 0 26 chr17 11962988 11963103 -83309548 + RSINE1 SINE B4 11 122 -43 5 676 8907 56 1 1 chr17 11963878 11964967 -83307684 - L1_Mm LINE L1 -190 5693 4605 5 676 1531 77 0 0 chr17 11964968 11965175 -83307476 + L1Md_F2 LINE L1 6376 6582 0 5 676 212 204 23 0 chr17 11966517 11966561 -83306090 - MER5B DNA MER1_type -11 167 123 5 676 757 330 38 6 chr17 11966631 11966951 -83305700 - MLT1B LTR MaLR -5 385 56 5 676 281 258 66 22 chr17 11966994 11967085 -83305566 + MER58B DNA MER1_type 246 340 -1 5 676 205 340 58 10 chr17 11967117 11967221 -83305430 + MIR SINE MIR 15 123 -139 5 676 362 293 83 0 chr17 11967355 11967536 -83305115 + L1MD3 LINE L1 7787 7982 -13 5 676 551 328 47 16 chr17 11967547 11967739 -83304912 + ID_B1 SINE B4 3 200 -24 5 676 930 198 9 76 chr17 11967740 11967964 -83304687 + B3 SINE B2 3 211 -5 5 676 3515 138 100 11 chr17 11968187 11968888 -83303763 + RMER12 LTR ERVK 1 763 -559 5 676 795 109 0 0 chr17 11968890 11969028 -83303623 + (TG)n Simple_repeat Simple_repeat 2 139 0 5 676 646 224 84 75 chr17 11969040 11969267 -83303384 + RMER12 LTR ERVK 994 1222 -100 5 676 910 167 23 0 chr17 11969474 11969648 -83303003 + URR1A DNA MER1_type 49 226 0 5 676 474 301 4 25 chr17 11970746 11970997 -83301654 + B4 SINE B4 11 292 0 5 676 1048 73 0 13 chr17 11971060 11971213 -83301438 + (GGA)n Simple_repeat Simple_repeat 3 153 0 5 676 297 156 0 38 chr17 11971214 11971294 -83301357 + GA-rich Low_complexity Low_complexity 2 78 0 5 676 362 253 0 12 chr17 11972217 11972297 -83300354 + ID4 SINE ID 4 82 -1 5 676 228 35 0 0 chr17 11972413 11972442 -83300209 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 676 204 40 0 0 chr17 11973288 11973313 -83299338 + (TGG)n Simple_repeat Simple_repeat 1 25 0 5 676 429 95 23 23 chr17 11973319 11973405 -83299246 + (TTTTC)n Simple_repeat Simple_repeat 5 90 0 5 676 389 242 148 52 chr17 11973405 11973540 -83299111 - B1F SINE Alu 0 149 2 5 676 1221 41 7 0 chr17 11974445 11974591 -83298060 + B1_Mus2 SINE Alu 1 147 0 5 676 201 39 0 0 chr17 11974592 11974618 -83298033 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 5 676 1330 251 105 17 chr17 11975069 11975544 -83297107 - RLTR20A2 LTR ERVK -16 562 46 5 676 822 257 47 71 chr17 11975640 11975937 -83296714 - B4 SINE B4 -2 290 1 5 676 22 0 0 0 chr17 11977266 11977288 -83295363 + AT_rich Low_complexity Low_complexity 1 22 0 5 676 309 300 0 0 chr17 11977340 11977420 -83295231 + PB1D10 SINE Alu 7 86 -31 5 676 198 0 0 0 chr17 11977879 11977901 -83294750 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 5 676 313 318 111 12 chr17 11978560 11978732 -83293919 - MER33 DNA MER1_type -86 238 50 5 676 232 294 82 9 chr17 11978859 11978969 -83293682 + MIR SINE MIR 142 259 -3 5 676 604 276 108 61 chr17 11980349 11980627 -83292024 - B4A SINE B4 -1 291 1 5 676 2580 164 103 9 chr17 11981066 11981298 -83291353 + RMER4B LTR ERVK 1 249 -336 5 676 194 0 39 0 chr17 11981298 11981324 -83291327 + (TTGG)n Simple_repeat Simple_repeat 3 29 0 5 676 2580 164 103 9 chr17 11981324 11981626 -83291025 + RMER4B LTR ERVK 250 584 -1 5 676 210 71 0 0 chr17 11982047 11982075 -83290576 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 5 676 2521 141 52 46 chr17 11982208 11982727 -83289924 + RLTR28 LTR ERVL 1 522 -2 5 676 317 248 25 76 chr17 11982818 11982936 -83289715 + ID_B1 SINE B4 108 219 -5 6 676 319 36 18 0 chr17 11983492 11983547 -83289104 + L1Md_F3 LINE L1 6529 6584 0 6 676 2181 139 40 0 chr17 11983762 11984115 -83288536 + MTC LTR MaLR 1 367 -54 6 676 524 106 12 0 chr17 11984764 11984849 -83287802 + (TG)n Simple_repeat Simple_repeat 1 86 0 6 676 204 270 40 26 chr17 11985495 11985571 -83287080 + C-rich Low_complexity Low_complexity 2 78 0 6 676 447 63 0 0 chr17 11985711 11985774 -83286877 + (GTTTG)n Simple_repeat Simple_repeat 2 64 0 6 676 238 65 0 0 chr17 11985774 11985805 -83286846 + (CATTT)n Simple_repeat Simple_repeat 1 31 0 6 676 796 39 0 0 chr17 11985806 11985908 -83286743 - B1_Mus2 SINE Alu -6 141 40 6 676 1156 158 0 0 chr17 11985932 11986136 -83286515 + (TCTCTG)n Simple_repeat Simple_repeat 1 204 0 6 676 352 123 35 0 chr17 11986144 11986201 -83286450 - PB1D9 SINE Alu -61 59 1 6 676 336 203 40 22 chr17 11986201 11986225 -83286426 - B4 SINE B4 -77 128 62 6 676 259 195 39 13 chr17 11987794 11987872 -83284779 + (TA)n Simple_repeat Simple_repeat 2 81 0 6 676 446 312 28 0 chr17 11988261 11988405 -83284246 + B1F SINE Alu 2 149 0 6 676 194 208 0 19 chr17 11988690 11988744 -83283907 + (TA)n Simple_repeat Simple_repeat 1 53 0 6 676 713 266 73 0 chr17 11988850 11989068 -83283583 - MLT1A0 LTR MaLR -2 363 130 6 676 627 328 41 17 chr17 11989386 11989681 -83282970 - MER57E2 LTR ERV1 -4 398 97 6 676 678 206 69 23 chr17 11990403 11990577 -83282074 - MTEa LTR MaLR -57 322 141 6 676 539 274 71 16 chr17 11990576 11990758 -83281893 - MTEb LTR MaLR -187 192 1 6 676 306 272 225 47 chr17 11991096 11991354 -83281297 + MLT1A0 LTR MaLR 3 306 -59 6 676 371 283 37 9 chr17 11992034 11992141 -83280510 + PB1D10 SINE Alu 8 117 0 6 676 207 0 0 0 chr17 11992965 11992988 -83279663 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 676 246 128 0 0 chr17 11993576 11993615 -83279036 + (TGG)n Simple_repeat Simple_repeat 3 41 0 6 676 488 185 9 0 chr17 11994565 11994673 -83277978 + (TG)n Simple_repeat Simple_repeat 1 109 0 6 676 207 0 0 0 chr17 11995253 11995276 -83277375 + (A)n Simple_repeat Simple_repeat 1 23 0 6 676 1759 131 27 63 chr17 11995303 11995636 -83277015 + ORR1A4 LTR MaLR 1 321 -8 6 676 369 0 0 0 chr17 11997061 11997102 -83275549 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 676 615 345 51 7 chr17 11998891 11999183 -83273468 - MER2 DNA MER2_type -39 306 2 6 676 288 278 36 77 chr17 12000560 12000643 -83272008 - L1M1 LINE L1 -442 5858 5783 1 676 1086 41 35 6 chr17 12000643 12000816 -83271835 + (TAGA)n Simple_repeat Simple_repeat 1 178 0 2 676 288 278 36 77 chr17 12000816 12000900 -83271751 - L1M1 LINE L1 -518 5782 5698 1 676 423 262 96 34 chr17 12002689 12002867 -83269784 + Lx9 LINE L1 7226 7414 -230 3 676 441 0 0 0 chr17 12002868 12002917 -83269734 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 676 381 43 0 0 chr17 12002965 12003012 -83269639 + (TC)n Simple_repeat Simple_repeat 2 48 0 5 676 453 19 0 0 chr17 12003012 12003065 -83269586 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 676 229 218 14 173 chr17 12003065 12003204 -83269447 + Lx9 LINE L1 7518 7634 -10 3 676 344 179 0 13 chr17 12005336 12005415 -83267236 + CT-rich Low_complexity Low_complexity 1 78 0 7 676 250 317 61 0 chr17 12005446 12005528 -83267123 + B1F SINE Alu 9 95 -54 8 676 1004 128 0 0 chr17 12005562 12005710 -83266941 + B1_Mus1 SINE Alu 1 148 0 9 676 928 12 45 34 chr17 12005720 12005896 -83266755 + (GGGAGA)n Simple_repeat Simple_repeat 3 180 0 1 676 201 132 0 26 chr17 12005896 12005924 -83266727 + G-rich Low_complexity Low_complexity 14 40 0 1 676 926 265 151 25 chr17 12006973 12007298 -83265353 - MTEa LTR MaLR -11 368 3 1 676 180 245 0 0 chr17 12007579 12007632 -83265019 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 676 465 19 0 0 chr17 12007632 12007686 -83264965 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 676 838 238 65 138 chr17 12009145 12009544 -83263107 + ORR1D1 LTR MaLR 3 372 -2 1 676 263 313 150 6 chr17 12010368 12010535 -83262116 + MLT1A0 LTR MaLR 1 191 -174 1 676 1070 119 162 15 chr17 12010574 12010771 -83261880 + URR1A DNA MER1_type 1 226 0 1 676 643 260 14 0 chr17 12011215 12011361 -83261290 + B1F SINE Alu 2 149 0 1 676 505 163 15 0 chr17 12013177 12013312 -83259339 + CT-rich Low_complexity Low_complexity 2 138 0 1 676 734 217 78 50 chr17 12013365 12013583 -83259068 - B4 SINE B4 -67 225 2 2 676 22 0 0 0 chr17 12014489 12014511 -83258140 + AT_rich Low_complexity Low_complexity 1 22 0 2 676 508 244 168 5 chr17 12014536 12014721 -83257930 - ID_B1 SINE B4 -3 221 7 2 676 540 126 0 0 chr17 12015516 12015603 -83257048 + (TA)n Simple_repeat Simple_repeat 1 87 0 2 676 1761 89 8 26 chr17 12015784 12016050 -83256601 + L1_Mus3 LINE L1 6372 6632 -6 2 676 226 246 116 0 chr17 12018466 12018535 -83254116 + ID4 SINE ID 5 81 -2 2 676 1062 55 7 7 chr17 12018656 12018802 -83253849 - B1_Mus1 SINE Alu 0 148 3 2 676 601 189 12 61 chr17 12018802 12018819 -83253832 - ID_B1 SINE B4 -1 223 69 2 676 231 250 78 0 chr17 12018935 12018999 -83253652 - L1M5 LINE L1 -557 5683 5615 2 676 319 195 0 155 chr17 12020185 12020282 -83252369 + PB1 SINE Alu 37 118 -9 2 676 962 137 39 19 chr17 12020879 12021087 -83251564 + RMER10B LTR ERVL 52 263 -135 3 676 894 162 0 0 chr17 12021095 12021255 -83251396 + CT-rich Low_complexity Low_complexity 3 162 0 3 676 1008 185 0 47 chr17 12021260 12021475 -83251176 + RMER10B LTR ERVL 194 398 0 3 676 189 0 0 0 chr17 12023738 12023759 -83248892 + (CG)n Simple_repeat Simple_repeat 2 22 0 3 676 297 0 0 0 chr17 12023759 12023791 -83248860 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 676 1121 243 22 32 chr17 12023983 12024118 -83248533 - Lx8 LINE L1 -54 7419 7332 3 676 498 96 0 0 chr17 12024118 12024191 -83248460 + (TA)n Simple_repeat Simple_repeat 1 73 0 3 676 2963 261 68 7 chr17 12024191 12024959 -83247692 - Lx9 LINE L1 -181 7463 6649 3 676 462 294 38 58 chr17 12025452 12025861 -83246790 - L1MCa LINE L1 -5527 1224 762 3 676 258 231 15 44 chr17 12025861 12025929 -83246722 - ID4 SINE ID -17 66 1 3 676 437 297 42 96 chr17 12025929 12026006 -83246645 - L1MCa LINE L1 -5284 761 679 3 676 324 296 51 26 chr17 12026431 12026587 -83246064 - L1MCa LINE L1 -6332 419 260 3 676 219 88 0 0 chr17 12029143 12029177 -83243474 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 676 701 336 56 36 chr17 12029177 12029622 -83243029 - MT2A LTR ERVL -72 461 8 4 676 453 333 63 39 chr17 12029653 12029960 -83242691 - MLT2B1 LTR ERVL -75 445 130 4 676 2197 137 7 39 chr17 12029960 12030370 -83242281 + RMER10B LTR ERVL 1 397 -1 4 676 453 333 63 39 chr17 12030370 12030393 -83242258 - MLT2B1 LTR ERVL -391 129 107 4 676 239 208 19 0 chr17 12030413 12030466 -83242185 - MLT2B1 LTR ERVL -461 54 1 4 676 388 283 182 18 chr17 12031940 12032186 -83240465 + B4 SINE B4 26 276 -16 4 676 465 246 7 66 chr17 12032240 12032392 -83240259 + MER2 DNA MER2_type 156 298 -47 4 676 1077 262 78 17 chr17 12032648 12033005 -83239646 - MTE2b LTR MaLR 0 379 1 4 676 226 301 28 104 chr17 12034465 12034647 -83238004 - L2 LINE L2 -3045 374 207 4 676 2120 99 18 56 chr17 12035191 12035533 -83237118 - ORR1A4 LTR MaLR 0 329 1 4 676 842 243 61 84 chr17 12035536 12035833 -83236818 + B4 SINE B4 3 292 0 4 676 314 304 7 11 chr17 12035844 12036116 -83236535 + (CATATA)n Simple_repeat Simple_repeat 1 270 0 5 676 239 164 32 16 chr17 12036187 12036249 -83236402 + T-rich Low_complexity Low_complexity 3 65 0 5 676 1123 68 7 39 chr17 12036250 12036403 -83236248 - B1_Mus1 SINE Alu 0 148 1 5 676 1023 205 11 5 chr17 12036419 12036610 -83236041 - B3 SINE B2 -24 192 1 5 676 182 196 36 0 chr17 12037132 12037188 -83235463 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 5 676 1383 175 28 57 chr17 12037213 12037546 -83235105 - ORR1D1 LTR MaLR 0 374 28 5 676 620 224 0 22 chr17 12037563 12037715 -83234936 - ORR1D1 LTR MaLR -254 140 1 5 676 261 250 0 62 chr17 12040583 12040664 -83231987 - MamSINE1 SINE tRNA -175 115 40 5 676 45 34 0 0 chr17 12041007 12041066 -83231585 + AT_rich Low_complexity Low_complexity 1 59 0 5 676 868 228 292 3 chr17 12041072 12041363 -83231288 + MTE2a LTR MaLR 5 379 0 5 676 432 0 0 0 chr17 12041471 12041519 -83231132 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 676 459 0 0 0 chr17 12042037 12042088 -83230563 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 676 612 0 0 0 chr17 12042093 12042161 -83230490 + (GGCTG)n Simple_repeat Simple_repeat 4 71 0 6 676 976 95 0 20 chr17 12042193 12042343 -83230308 + B2_Mm2 SINE B2 2 148 -47 6 676 477 0 0 0 chr17 12042350 12042403 -83230248 + (TAAA)n Simple_repeat Simple_repeat 1 53 0 6 676 614 345 28 8 chr17 12042412 12042666 -83229985 + B4A SINE B4 24 282 -10 6 676 324 48 0 0 chr17 12042672 12042714 -83229937 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 676 232 200 15 30 chr17 12043091 12043158 -83229493 + (TG)n Simple_repeat Simple_repeat 1 66 0 6 676 363 44 0 0 chr17 12043160 12043205 -83229446 + (TTG)n Simple_repeat Simple_repeat 1 45 0 6 676 232 311 0 0 chr17 12043206 12043267 -83229384 - ID4 SINE ID -17 66 6 6 676 319 169 0 0 chr17 12043461 12043526 -83229125 + (CATATA)n Simple_repeat Simple_repeat 3 67 0 7 676 488 193 9 0 chr17 12043528 12043637 -83229014 + (TAGA)n Simple_repeat Simple_repeat 4 113 0 7 676 366 328 9 0 chr17 12043805 12043921 -83228730 + PB1D7 SINE Alu 1 117 -3 7 676 228 278 196 0 chr17 12044027 12044124 -83228527 - LTR80B LTR ERVL -261 323 208 7 676 856 313 51 34 chr17 12044478 12045066 -83227585 + L2a LINE L2 2568 3164 -262 7 676 1423 262 28 30 chr17 12045491 12045889 -83226762 + MTD LTR MaLR 5 401 -18 7 676 384 133 0 0 chr17 12046651 12046711 -83225940 - ORR1B2 LTR MaLR 0 367 308 7 676 1026 88 0 42 chr17 12046852 12046995 -83225656 + B1_Mus1 SINE Alu 1 137 -11 7 676 249 33 0 0 chr17 12046995 12047025 -83225626 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 7 676 333 311 28 0 chr17 12047224 12047242 -83225409 - PB1D10 SINE Alu -8 109 1 7 676 344 296 0 0 chr17 12047242 12047330 -83225321 - ID_B1 SINE B4 -55 169 82 8 676 28 0 0 0 chr17 12048904 12048932 -83223719 + AT_rich Low_complexity Low_complexity 1 28 0 8 676 272 273 11 22 chr17 12048936 12049026 -83223625 - RSINE1 SINE B4 -37 128 40 8 676 266 197 92 66 chr17 12049067 12049143 -83223508 - RSINE1 SINE B4 -85 80 3 8 676 279 0 0 0 chr17 12050260 12050291 -83222360 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 676 506 210 92 0 chr17 12050816 12050935 -83221716 - B3 SINE B2 -80 136 7 8 676 259 228 0 0 chr17 12051523 12051580 -83221071 - ID_B1 SINE B4 -16 208 152 8 676 209 57 29 0 chr17 12052641 12052676 -83219975 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 8 676 234 318 45 0 chr17 12052982 12053070 -83219581 - Charlie5 DNA MER1_type -2522 102 11 8 676 265 323 0 0 chr17 12054449 12054511 -83218140 + (CGTG)n Simple_repeat Simple_repeat 1 62 0 8 676 867 310 118 25 chr17 12054515 12054955 -83217696 - Lx8 LINE L1 -146 7327 6847 9 676 459 35 0 0 chr17 12055540 12055597 -83217054 + (CA)n Simple_repeat Simple_repeat 2 58 0 9 676 286 304 88 12 chr17 12055955 12056125 -83216526 - L1MB4 LINE L1 -1 6179 5997 9 676 627 144 23 8 chr17 12056396 12056529 -83216122 + Lx4A LINE L1 6924 7058 0 9 676 21 0 0 0 chr17 12056531 12056552 -83216099 + AT_rich Low_complexity Low_complexity 1 21 0 9 676 1432 65 5 27 chr17 12056556 12056744 -83215907 + B2_Mm1a SINE B2 2 185 -8 9 676 607 295 38 28 chr17 12057433 12057646 -83215005 - ID_B1 SINE B4 -9 215 1 9 676 336 289 70 32 chr17 12058119 12058276 -83214375 + RSINE1 SINE B4 1 163 -2 9 676 331 258 118 43 chr17 12058296 12058497 -83214154 + L1MA5 LINE L1 6069 6282 -18 9 677 363 240 9 57 chr17 12059039 12059145 -83213506 - B1F SINE Alu -8 141 41 9 677 246 116 0 0 chr17 12059692 12059735 -83212916 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 677 382 282 150 34 chr17 12060328 12060475 -83212176 - ID_B1 SINE B4 -37 187 24 1 677 489 306 138 50 chr17 12061790 12062051 -83210600 - B4 SINE B4 -8 284 1 1 677 21 0 0 0 chr17 12063159 12063180 -83209471 + AT_rich Low_complexity Low_complexity 1 21 0 1 677 1173 68 0 0 chr17 12063190 12063337 -83209314 - B1_Mus2 SINE Alu 0 147 1 1 677 216 0 0 0 chr17 12064137 12064161 -83208490 + (T)n Simple_repeat Simple_repeat 1 24 0 1 677 510 332 22 44 chr17 12064473 12064700 -83207951 + B4A SINE B4 24 245 -47 1 677 504 211 0 42 chr17 12064698 12064817 -83207834 - RMER19B LTR ERVK -373 529 416 1 677 1841 110 31 3 chr17 12064809 12065102 -83207549 + RMER19B LTR ERVK 585 885 -17 1 677 3829 32 0 0 chr17 12065102 12065544 -83207107 - L1Md_T LINE L1 -892 4991 4550 1 677 5162 17 0 0 chr17 12065544 12066127 -83206524 + L1Md_T LINE L1 5004 5586 -297 1 677 9154 6 0 0 chr17 12066127 12067153 -83205498 + L1Md_T LINE L1 5587 6582 0 1 677 1475 69 15 10 chr17 12067801 12068007 -83204644 + L1Md_F2 LINE L1 6376 6582 0 1 677 366 254 19 101 chr17 12068072 12068218 -83204433 + MT2B LTR ERVL 119 257 -327 1 677 405 264 135 8 chr17 12068112 12068238 -83204413 + B4 SINE B4 80 221 -71 1 677 655 128 3 12 chr17 12068127 12068243 -83204408 + B1_Mus2 SINE Alu 12 120 0 1 677 747 0 0 0 chr17 12068254 12068337 -83204314 + (GGAAA)n Simple_repeat Simple_repeat 3 85 0 1 677 712 269 62 5 chr17 12068381 12068590 -83204061 + ID_B1 SINE B4 4 224 0 1 677 2053 119 65 2 chr17 12068996 12069393 -83203258 - BGLII_Mus LTR ERVK 0 422 1 1 677 1498 186 210 65 chr17 12070698 12071222 -83201429 + MT2B LTR ERVL 1 600 -1 1 677 2025 52 0 0 chr17 12071429 12071677 -83200974 + L1_Mus1 LINE L1 6320 6567 0 1 677 484 221 7 7 chr17 12072083 12072238 -83200413 + (TA)n Simple_repeat Simple_repeat 1 155 0 1 677 225 0 0 0 chr17 12072240 12072265 -83200386 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 677 738 196 379 21 chr17 12072267 12072605 -83200046 - MT2A LTR ERVL -74 459 1 1 677 835 233 82 5 chr17 12073109 12073303 -83199348 - B3 SINE B2 -7 209 1 1 677 246 258 30 0 chr17 12074771 12074837 -83197814 - RMER30 DNA MER1_type 0 202 135 1 677 233 246 0 30 chr17 12074900 12074967 -83197684 + (TATATG)n Simple_repeat Simple_repeat 5 69 0 1 677 2046 145 8 23 chr17 12074967 12075319 -83197332 - RLTR15 LTR ERVK 0 359 13 1 677 375 192 0 0 chr17 12075319 12075397 -83197254 + (TA)n Simple_repeat Simple_repeat 1 78 0 1 677 811 230 244 23 chr17 12075402 12075709 -83196942 - MTE2b LTR MaLR -4 375 1 1 677 289 327 65 0 chr17 12075749 12075856 -83196795 - L1MA4A LINE L1 -372 5931 5818 1 677 4387 24 0 0 chr17 12075882 12076375 -83196276 - MT2_Mm LTR ERVL 0 493 1 1 677 254 364 44 22 chr17 12076375 12076555 -83196096 - MLT1D LTR MaLR -2 503 320 1 677 282 302 22 65 chr17 12076707 12076845 -83195806 - MLT1D LTR MaLR -373 132 1 1 677 251 319 153 21 chr17 12077200 12077389 -83195262 - MLT1H LTR MaLR -267 282 69 1 677 640 271 27 0 chr17 12078923 12079111 -83193540 - B3 SINE B2 -23 193 1 1 677 207 114 0 0 chr17 12079151 12079186 -83193465 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 677 1117 188 102 93 chr17 12079747 12080111 -83192540 - ORR1D2 LTR MaLR -2 368 2 1 677 582 198 0 0 chr17 12081345 12081517 -83191134 + (TA)n Simple_repeat Simple_repeat 1 172 0 1 677 232 215 28 18 chr17 12081553 12081662 -83190989 + (TA)n Simple_repeat Simple_repeat 2 111 0 1 677 295 260 131 23 chr17 12081939 12082069 -83190582 + B1F1 SINE Alu 1 144 -5 1 677 250 303 0 0 chr17 12082079 12082145 -83190506 + tRNA-Ala-GCA tRNA tRNA 1 66 -9 1 677 286 88 34 34 chr17 12082205 12082264 -83190387 + (CAGAGA)n Simple_repeat Simple_repeat 3 61 0 1 677 1107 181 77 3 chr17 12084235 12084541 -83188110 - ORR1C2 LTR MaLR -4 380 9 1 677 288 0 0 0 chr17 12084541 12084573 -83188078 + (T)n Simple_repeat Simple_repeat 1 32 0 1 677 1146 82 0 0 chr17 12084573 12084719 -83187932 - B1_Mm SINE Alu 0 147 2 1 677 229 65 0 0 chr17 12084719 12084750 -83187901 - ORR1C2 LTR MaLR -352 32 2 1 677 250 238 0 36 chr17 12084895 12084984 -83187667 - BC1_Mm scRNA scRNA 0 83 1 1 677 453 239 45 9 chr17 12085846 12085956 -83186695 - PB1D7 SINE Alu -6 114 1 1 677 401 194 31 0 chr17 12086111 12086209 -83186442 + C-rich Low_complexity Low_complexity 4 104 0 1 677 224 234 0 21 chr17 12088580 12088628 -83184023 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 677 305 338 123 7 chr17 12088630 12088776 -83183875 - RSINE1 SINE B4 0 165 3 1 677 1103 50 50 0 chr17 12089223 12089364 -83183287 - B1_Mus1 SINE Alu 0 148 1 1 677 293 306 34 88 chr17 12089397 12089544 -83183107 + ID_B1 SINE B4 1 139 -85 1 677 22 35 0 0 chr17 12091484 12091513 -83181138 + AT_rich Low_complexity Low_complexity 1 29 0 1 677 1430 180 32 26 chr17 12091522 12091835 -83180816 - RMER1C Other Other 0 1342 1028 1 677 374 43 14 54 chr17 12091836 12091884 -83180767 + (CAAAAA)n Simple_repeat Simple_repeat 1 46 0 1 677 1220 41 7 0 chr17 12091884 12092031 -83180620 + B1_Mus1 SINE Alu 1 148 0 1 677 374 43 14 54 chr17 12092031 12092056 -83180595 + (CAAAAA)n Simple_repeat Simple_repeat 5 28 0 1 677 1213 220 88 3 chr17 12092056 12092351 -83180300 - RMER1C Other Other -303 1039 755 1 677 509 230 26 9 chr17 12092373 12092487 -83180164 + ID_B1 SINE B4 1 116 -108 1 677 192 40 0 0 chr17 12094221 12094246 -83178405 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 1 677 235 303 81 0 chr17 12096551 12096650 -83176001 + MIR SINE MIR 124 230 -32 1 677 510 320 132 15 chr17 12097163 12097683 -83174968 + L1MC LINE L1 5214 5794 -448 1 677 270 56 0 0 chr17 12097993 12098029 -83174622 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 1 677 891 75 0 0 chr17 12098545 12098665 -83173986 + (TCC)n Simple_repeat Simple_repeat 3 122 0 1 677 691 83 0 0 chr17 12098840 12098936 -83173715 - B1_Mm SINE Alu 0 147 52 1 677 2092 214 22 126 chr17 12100502 12101144 -83171507 - RMER15 LTR ERVL 0 575 1 1 677 410 305 108 14 chr17 12101184 12101527 -83171124 - MLT1C LTR MaLR -31 436 33 1 677 267 381 96 13 chr17 12101592 12101749 -83170902 - MLT1J LTR MaLR -333 179 10 1 677 494 249 91 27 chr17 12101796 12101982 -83170669 + MER33 DNA MER1_type 12 209 -115 1 677 1458 222 86 52 chr17 12102017 12102493 -83170158 + RMER5 LTR ERV1 33 524 -10 1 677 228 269 74 0 chr17 12102504 12102612 -83170039 + MER33 DNA MER1_type 205 320 -4 1 677 373 277 100 8 chr17 12102954 12103074 -83169577 - B1F2 SINE Alu 0 149 19 1 677 189 107 0 0 chr17 12103810 12103838 -83168813 + (T)n Simple_repeat Simple_repeat 1 28 0 1 677 252 59 0 0 chr17 12104507 12104541 -83168110 + (T)n Simple_repeat Simple_repeat 1 34 0 1 677 234 326 124 0 chr17 12105175 12105264 -83167387 - MIRb SINE MIR -8 260 161 1 677 34 0 0 0 chr17 12106331 12106365 -83166286 + AT_rich Low_complexity Low_complexity 1 34 0 1 677 25 51 0 0 chr17 12106374 12106413 -83166238 + AT_rich Low_complexity Low_complexity 1 39 0 1 677 2128 170 119 31 chr17 12106948 12107434 -83165217 - RLTR24 LTR ERV1 0 529 1 1 677 487 159 212 20 chr17 12108922 12109088 -83163563 + B3 SINE B2 1 193 0 1 677 489 276 75 14 chr17 12109598 12109745 -83162906 + RSINE1 SINE B4 4 159 -6 1 677 22 0 0 0 chr17 12109777 12109799 -83162852 + AT_rich Low_complexity Low_complexity 1 22 0 1 677 252 257 0 0 chr17 12109904 12109974 -83162677 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 677 225 200 0 0 chr17 12110022 12110062 -83162589 - Lx8 LINE L1 -271 7202 7163 1 677 471 296 67 43 chr17 12111299 12111507 -83161144 + MER20 DNA MER1_type 3 215 -4 1 677 186 128 0 0 chr17 12113030 12113069 -83159582 + (A)n Simple_repeat Simple_repeat 1 39 0 1 677 1211 55 0 0 chr17 12114318 12114464 -83158187 - B1_Mus1 SINE Alu -2 146 1 1 677 218 203 47 0 chr17 12114656 12114720 -83157931 + (TTA)n Simple_repeat Simple_repeat 3 69 0 1 677 241 336 47 63 chr17 12114847 12114974 -83157677 + MER45A DNA Tip100 3 127 -51 1 677 216 0 0 0 chr17 12115270 12115294 -83157357 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 677 1679 140 66 111 chr17 12115399 12115761 -83156890 + ORR1B1 LTR MaLR 41 386 -8 1 677 268 333 0 0 chr17 12116186 12116306 -83156345 + (CAT)n Simple_repeat Simple_repeat 3 122 0 1 677 1331 288 66 22 chr17 12116864 12117361 -83155290 + Lx8 LINE L1 6925 7443 -30 1 677 576 192 10 0 chr17 12118432 12118536 -83154115 - RMER13A LTR ERVK -114 746 642 1 677 817 182 9 16 chr17 12118564 12118750 -83153901 + RMER13A LTR ERVK 546 805 -55 1 677 931 276 18 35 chr17 12119338 12119623 -83153028 + B4 SINE B4 5 284 -8 1 677 321 283 149 6 chr17 12120757 12120938 -83151713 - Charlie4 DNA MER1_type -37 1924 1718 1 677 265 276 0 106 chr17 12120956 12121041 -83151610 + B1_Mur4 SINE Alu 5 80 -70 1 677 810 58 0 0 chr17 12121210 12121314 -83151337 + (TC)n Simple_repeat Simple_repeat 2 105 0 1 677 967 123 7 0 chr17 12121317 12121455 -83151196 - B1_Mus1 SINE Alu -9 139 1 1 677 423 242 20 10 chr17 12122442 12122542 -83150109 - Charlie4 DNA MER1_type -1842 119 19 1 677 486 236 26 39 chr17 12122593 12122811 -83149840 - L1M3 LINE L1 -743 5425 5213 1 677 243 265 0 0 chr17 12122819 12122868 -83149783 + ID_B1 SINE B4 167 215 -9 1 677 972 113 28 0 chr17 12122985 12123126 -83149525 - B1_Mur4 SINE Alu -5 145 1 1 677 216 0 0 0 chr17 12123954 12123978 -83148673 + (TC)n Simple_repeat Simple_repeat 2 25 0 1 677 1950 136 45 45 chr17 12124016 12124330 -83148321 + ORR1B1 LTR MaLR 30 348 -46 1 677 4824 104 22 65 chr17 12124330 12125100 -83147551 - RMER19A LTR ERVK 0 737 1 1 677 1950 136 45 45 chr17 12125100 12125140 -83147511 + ORR1B1 LTR MaLR 349 384 -10 1 677 196 354 0 30 chr17 12126269 12126368 -83146283 + L2c LINE L2 3090 3185 -202 2 677 846 227 1 65 chr17 12127159 12127393 -83145258 + B3A SINE B2 1 216 0 2 677 180 77 0 0 chr17 12127393 12127419 -83145232 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 677 688 225 42 7 chr17 12127444 12127587 -83145064 + B1_Mus1 SINE Alu 1 148 0 2 677 210 71 0 0 chr17 12128010 12128038 -83144613 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 677 342 0 0 0 chr17 12128561 12128599 -83144052 + (CATA)n Simple_repeat Simple_repeat 4 41 0 2 677 575 162 157 35 chr17 12128638 12128753 -83143898 + B1_Mur2 SINE Alu 1 129 -20 2 677 448 275 114 22 chr17 12128754 12129070 -83143581 + L1M5 LINE L1 4997 5341 -805 2 677 783 272 38 0 chr17 12130855 12131026 -83141625 + B3A SINE B2 1 174 -24 2 677 243 0 0 0 chr17 12131026 12131053 -83141598 + (GA)n Simple_repeat Simple_repeat 2 28 0 2 677 783 272 38 0 chr17 12131053 12131065 -83141586 + B3A SINE B2 175 189 -9 2 677 362 57 19 0 chr17 12131192 12131245 -83141406 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 677 2374 288 40 35 chr17 12131249 12132051 -83140600 - Lx8 LINE L1 -535 6938 6133 2 677 1668 139 22 11 chr17 12132113 12132389 -83140262 - ORR1A2 LTR MaLR -8 319 41 2 677 504 195 7 141 chr17 12132400 12132415 -83140236 - MT2B LTR ERVL -326 275 264 2 677 477 0 0 0 chr17 12132415 12132468 -83140183 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 677 738 153 0 0 chr17 12132468 12132579 -83140072 - B1_Mus2 SINE Alu -36 111 1 2 677 504 195 7 141 chr17 12132579 12132601 -83140050 - MT2B LTR ERVL -338 263 147 2 677 265 103 0 0 chr17 12134186 12134225 -83138426 + MTC LTR MaLR 1 39 -380 2 677 1330 139 5 19 chr17 12134226 12134431 -83138220 - URR1B DNA MER1_type 0 225 24 2 677 2191 177 8 23 chr17 12134435 12134828 -83137823 + MTC LTR MaLR 35 421 0 2 677 1141 239 50 53 chr17 12134833 12135213 -83137438 + MTE2a LTR MaLR 1 379 0 2 677 978 308 54 3 chr17 12135970 12136283 -83136368 - MLT2C1 LTR ERVL -62 335 7 2 677 278 316 0 0 chr17 12136348 12136424 -83136227 + (CA)n Simple_repeat Simple_repeat 1 76 0 2 677 1405 80 11 0 chr17 12136857 12137045 -83135606 + B2_Mm1t SINE B2 2 191 -2 2 677 441 339 0 8 chr17 12137397 12137516 -83135135 - ID_B1 SINE B4 -25 199 82 2 677 370 260 107 30 chr17 12137649 12137780 -83134871 - MLT1A1 LTR MaLR 0 408 268 2 677 2838 185 41 4 chr17 12138058 12138573 -83134078 - RMER5 LTR ERV1 0 534 1 2 677 1738 149 135 18 chr17 12139429 12139524 -83133127 + ORR1B2 LTR MaLR 1 112 -255 2 677 2038 170 13 173 chr17 12139524 12140079 -83132572 - RMER4A LTR ERVK 0 466 1 2 677 1738 149 135 18 chr17 12140079 12140310 -83132341 + ORR1B2 LTR MaLR 113 365 -2 2 677 829 255 98 68 chr17 12140367 12140662 -83131989 - MTEb LTR MaLR -73 306 3 2 677 252 196 20 0 chr17 12141454 12141505 -83131146 - RMER30 DNA MER1_type -47 155 104 2 677 247 260 83 46 chr17 12141455 12141564 -83131087 + Charlie12 DNA MER1_type 48 160 -2713 2 677 265 263 73 10 chr17 12141788 12141884 -83130767 + B4A SINE B4 170 271 -21 2 677 314 129 0 16 chr17 12141938 12142001 -83130650 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 677 1152 187 89 92 chr17 12143402 12143784 -83128867 - RMER10A LTR ERVL -2 440 60 2 677 182 297 39 51 chr17 12144841 12144919 -83127732 - L2a LINE L2 -10 3416 3340 2 677 1744 189 43 8 chr17 12145604 12145972 -83126679 + ORR1C2 LTR MaLR 4 384 0 2 677 2219 233 6 24 chr17 12146318 12146824 -83125827 - Lx7 LINE L1 -330 7366 6870 2 677 334 346 90 0 chr17 12148952 12149085 -83123566 - MER20 DNA MER1_type -18 201 57 2 677 282 251 62 143 chr17 12149024 12149098 -83123553 + MT2B2 LTR ERVL 105 260 -324 2 677 488 277 17 8 chr17 12149098 12149218 -83123433 + B1F1 SINE Alu 17 137 -12 2 677 282 251 62 143 chr17 12149218 12149233 -83123418 + MT2B2 LTR ERVL 261 296 -288 2 677 596 282 29 6 chr17 12150402 12150577 -83122074 + B3A SINE B2 4 182 -16 2 677 21 36 0 0 chr17 12150674 12150702 -83121949 + AT_rich Low_complexity Low_complexity 1 28 0 2 677 1049 127 72 6 chr17 12150763 12150930 -83121721 - RLTR25A LTR ERVK 0 1103 926 2 677 1525 227 93 27 chr17 12150930 12151369 -83121282 + RMER13A LTR ERVK 1 468 -392 2 677 368 326 68 68 chr17 12151419 12151715 -83120936 + RMER13A LTR ERVK 565 860 0 2 677 4887 145 31 17 chr17 12151715 12152546 -83120105 - RLTR25B LTR ERVK -185 843 1 2 677 306 0 0 0 chr17 12154206 12154240 -83118411 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 677 26 0 0 0 chr17 12154284 12154310 -83118341 + AT_rich Low_complexity Low_complexity 1 26 0 2 677 734 67 19 0 chr17 12154474 12154578 -83118073 + (GAAA)n Simple_repeat Simple_repeat 3 108 0 2 677 751 289 27 74 chr17 12155076 12155375 -83117276 + B4A SINE B4 1 285 -7 2 677 199 319 29 76 chr17 12155439 12155469 -83117182 - MIRm SINE MIR -89 187 156 2 677 270 21 64 0 chr17 12155469 12155516 -83117135 + (TTG)n Simple_repeat Simple_repeat 2 51 0 2 677 199 319 29 76 chr17 12155516 12155590 -83117061 - MIRm SINE MIR -121 155 88 2 677 389 300 204 32 chr17 12156074 12156418 -83116233 - Charlie2a DNA MER1_type -120 2741 2339 2 677 374 288 108 0 chr17 12156795 12156906 -83115745 + RSINE1 SINE B4 2 124 -41 2 677 225 65 0 0 chr17 12156906 12156937 -83115714 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 677 512 30 15 0 chr17 12156937 12157002 -83115649 + (GA)n Simple_repeat Simple_repeat 2 68 0 2 677 1364 292 134 40 chr17 12157410 12158162 -83114489 - Charlie2a DNA MER1_type -1357 1504 682 2 677 248 388 43 38 chr17 12158183 12158392 -83114259 - Charlie2b DNA MER1_type -2131 651 442 2 677 2534 122 23 3 chr17 12160326 12160712 -83111939 - ORR1B1 LTR MaLR 0 394 1 2 677 7856 53 23 1 chr17 12161228 12162293 -83110358 + L1_Mus1 LINE L1 5465 6551 -16 2 677 297 0 0 0 chr17 12162294 12162327 -83110324 + (TAA)n Simple_repeat Simple_repeat 3 35 0 2 677 399 127 0 0 chr17 12162586 12162649 -83110002 + (TTCA)n Simple_repeat Simple_repeat 3 65 0 2 677 1275 89 0 0 chr17 12162765 12162944 -83109707 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 2 677 414 57 0 0 chr17 12162944 12162997 -83109654 + (TCCC)n Simple_repeat Simple_repeat 1 53 0 2 677 1253 238 64 38 chr17 12162997 12163342 -83109309 + ORR1E LTR MaLR 1 354 -5 2 677 2254 302 91 58 chr17 12163620 12163723 -83108928 - Lx9 LINE L1 -14 7630 7521 2 677 423 0 0 0 chr17 12163723 12163770 -83108881 + (TGG)n Simple_repeat Simple_repeat 1 47 0 2 677 2254 302 91 58 chr17 12163770 12164060 -83108591 - Lx9 LINE L1 -124 7520 7185 2 677 1287 98 6 6 chr17 12164060 12164235 -83108416 + B2_Mm2 SINE B2 3 177 -18 2 677 2254 302 91 58 chr17 12164235 12165088 -83107563 - Lx9 LINE L1 -460 7184 6341 2 677 333 260 25 199 chr17 12166521 12166968 -83105683 + RMER17C LTR ERVK 8 376 -34 2 677 241 237 26 103 chr17 12167314 12167469 -83105182 + RMER17A2 LTR ERVK 245 387 -519 2 677 214 315 91 80 chr17 12167904 12168080 -83104571 - L2a LINE L2 -2 3424 3196 2 677 228 360 45 9 chr17 12168081 12168193 -83104458 - MER58B DNA MER1_type -4 337 222 2 677 396 0 0 0 chr17 12168883 12168927 -83103724 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 677 1142 195 5 23 chr17 12170365 12170585 -83102066 + B3 SINE B2 1 216 0 2 677 674 275 50 11 chr17 12172156 12172336 -83100315 - B4 SINE B4 0 292 106 2 677 536 0 16 0 chr17 12172347 12172411 -83100240 + (TG)n Simple_repeat Simple_repeat 2 66 0 2 677 771 258 14 32 chr17 12173057 12173277 -83099374 - ID_B1 SINE B4 -8 216 1 2 677 276 30 0 0 chr17 12173766 12173799 -83098852 + (CACG)n Simple_repeat Simple_repeat 4 36 0 2 677 243 189 0 0 chr17 12175441 12175494 -83097157 + (CACCAT)n Simple_repeat Simple_repeat 4 56 0 2 677 655 153 77 46 chr17 12175496 12175626 -83097025 - B1_Mus2 SINE Alu 0 147 14 2 677 265 325 73 8 chr17 12177077 12177201 -83095450 - RLTR40 LTR ERVK -324 493 362 2 677 284 143 0 18 chr17 12177246 12177303 -83095348 + C-rich Low_complexity Low_complexity 3 58 0 2 677 656 259 71 71 chr17 12177303 12177586 -83095065 - RLTR40 LTR ERVK -515 302 20 2 677 589 209 31 87 chr17 12177633 12177820 -83094831 + MTEa LTR MaLR 177 377 -2 2 677 1692 31 0 0 chr17 12178916 12179108 -83093543 + B2_Mm1a SINE B2 2 193 0 2 677 432 246 73 81 chr17 12179621 12179701 -83092950 + ID SINE ID 4 82 -142 2 677 272 204 0 0 chr17 12179701 12179750 -83092901 + PB1D7 SINE Alu 2 50 -70 2 677 472 270 0 0 chr17 12179801 12179901 -83092750 + ID_B1 SINE B4 107 206 -18 2 677 1151 102 11 0 chr17 12179902 12180078 -83092573 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 2 677 334 348 72 18 chr17 12180080 12180247 -83092404 + HAL1-3A_ME LINE L1 2294 2469 -389 2 677 213 300 0 0 chr17 12180271 12180331 -83092320 - ID4_ SINE ID 0 83 24 2 677 408 227 39 11 chr17 12180348 12180461 -83092190 - PB1D7 SINE Alu 0 120 5 2 677 270 241 21 94 chr17 12180378 12180474 -83092177 - MT2B2 LTR ERVL -338 246 158 2 677 335 245 70 20 chr17 12180628 12180728 -83091923 + Charlie5 DNA MER1_type 2480 2584 -40 2 677 294 257 14 14 chr17 12182252 12182323 -83090328 + Charlie12 DNA MER1_type 31 101 -2772 2 677 600 14 0 0 chr17 12182794 12182863 -83089788 + (ATG)n Simple_repeat Simple_repeat 2 70 0 2 677 994 224 19 5 chr17 12184985 12185196 -83087455 - B3 SINE B2 -1 215 2 2 677 1098 179 29 10 chr17 12185209 12185418 -83087233 + Lx4B LINE L1 6845 7057 -1 2 677 1061 90 0 0 chr17 12187626 12187770 -83084881 - B1_Mus1 SINE Alu 0 148 5 2 677 805 254 66 5 chr17 12187978 12188176 -83084475 - ID_B1 SINE B4 -7 217 8 2 677 648 199 63 8 chr17 12188203 12188330 -83084321 - B1_Mur2 SINE Alu -15 134 1 2 677 612 226 0 0 chr17 12188775 12188890 -83083761 + B3 SINE B2 7 121 -95 2 677 183 80 0 0 chr17 12188959 12188984 -83083667 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 678 619 209 0 0 chr17 12189980 12190085 -83082566 - B3 SINE B2 -90 126 22 2 678 411 78 0 0 chr17 12190217 12190281 -83082370 + (CA)n Simple_repeat Simple_repeat 2 65 0 2 678 403 299 32 151 chr17 12190751 12190925 -83081726 - B4A SINE B4 -17 275 2 3 678 825 134 29 29 chr17 12190805 12190943 -83081708 - B1_Mus2 SINE Alu -1 146 9 3 678 632 163 109 15 chr17 12190925 12191062 -83081589 - BC1_Mm scRNA scRNA -1 151 2 3 678 327 287 52 15 chr17 12191092 12191225 -83081426 + B1F SINE Alu 1 143 -6 3 678 1086 95 95 0 chr17 12191983 12192152 -83080499 + B2_Mm2 SINE B2 1 185 -10 3 678 387 0 0 0 chr17 12192169 12192212 -83080439 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 3 678 198 0 0 0 chr17 12192261 12192283 -83080368 + (GA)n Simple_repeat Simple_repeat 1 22 0 3 678 414 378 14 0 chr17 12192416 12192559 -83080092 - MER119 DNA MER1_type -435 148 4 3 678 894 152 0 198 chr17 12192658 12192896 -83079755 - URR1B DNA MER1_type 0 225 35 3 678 207 0 0 0 chr17 12193528 12193551 -83079100 + (CCCTAA)n Simple_repeat Simple_repeat 4 26 0 3 678 3506 23 5 0 chr17 12193551 12193944 -83078707 - MTA_Mm LTR MaLR -1 395 1 3 678 5667 39 1 1 chr17 12193944 12194637 -83078014 - MTA_Mm-int LTR MaLR 0 1098 406 3 678 1889 124 80 0 chr17 12194637 12194936 -83077715 - IAPEY2_LTR LTR ERVK 0 357 35 3 678 3368 39 2 0 chr17 12194944 12195355 -83077296 - MTA_Mm-int LTR MaLR -686 412 1 3 678 3471 43 0 0 chr17 12195355 12195751 -83076900 - MTA_Mm LTR MaLR 0 396 1 3 678 288 0 0 0 chr17 12195751 12195783 -83076868 + (CCCTAA)n Simple_repeat Simple_repeat 3 34 0 3 678 901 186 73 24 chr17 12195849 12196014 -83076637 + B3 SINE B2 35 207 -9 3 678 299 298 42 84 chr17 12196100 12196243 -83076408 + RMER12 LTR ERVK 729 865 -457 3 678 272 241 88 44 chr17 12196248 12196339 -83076312 + MER46C DNA MER2_type 244 338 0 3 678 402 258 72 101 chr17 12197330 12197537 -83075114 - RMER30 DNA MER1_type -1 201 1 3 678 450 303 252 21 chr17 12197566 12197903 -83074748 - MER47B DNA MER2_type 0 418 4 3 678 192 277 45 30 chr17 12199327 12199394 -83073257 - L2a LINE L2 -5 3421 3354 3 678 1156 68 0 7 chr17 12199836 12199984 -83072667 + B1_Mus2 SINE Alu 1 147 0 3 678 429 256 11 1 chr17 12200114 12200205 -83072446 + ORR1D1 LTR MaLR 2 92 -282 3 678 3189 51 2 5 chr17 12200205 12200602 -83072049 + L1Md_F2 LINE L1 6187 6582 0 3 678 405 261 0 105 chr17 12200602 12200643 -83072008 + ORR1D1 LTR MaLR 80 120 -264 3 678 235 260 82 55 chr17 12200950 12201060 -83071591 - MT2_Mm LTR ERVL -187 306 194 3 678 488 259 89 20 chr17 12201674 12201743 -83070908 - RLTR20D LTR ERVK 0 578 513 3 678 504 0 0 0 chr17 12201743 12201799 -83070852 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 678 488 259 89 20 chr17 12201799 12201875 -83070776 - RLTR20D LTR ERVK -66 512 424 3 678 709 298 65 43 chr17 12201866 12202143 -83070508 - RLTR20D LTR ERVK -285 283 1 3 678 4903 123 111 19 chr17 12202182 12203151 -83069500 - MYSERV16_I-int LTR ERVK -21 2305 1247 3 678 42056 9 1 2 chr17 12203151 12210771 -83061880 - L1Md_A LINE L1 0 6582 1 3 678 5963 48 1 16 chr17 12210760 12212204 -83060447 - L1Md_A LINE L1 -5972 752 1 3 678 4058 150 59 34 chr17 12212204 12212614 -83060037 - MYSERV16_I-int LTR ERVK -1071 1255 740 3 678 1184 81 0 0 chr17 12212614 12212762 -83059889 + B1_Mus1 SINE Alu 1 148 0 3 678 4058 193 69 50 chr17 12212762 12213603 -83059048 - MYSERV16_I-int LTR ERVK -1461 1381 1 3 678 266 281 22 0 chr17 12214126 12214215 -83058436 - MYSERV16_I-int LTR ERVK -2165 677 587 3 678 443 266 18 27 chr17 12214512 12214624 -83058027 - RLTR20A1 LTR ERVK 0 551 441 3 678 24 32 0 0 chr17 12214628 12214659 -83057992 + AT_rich Low_complexity Low_complexity 1 31 0 3 678 1167 75 7 0 chr17 12214919 12215066 -83057585 + B1_Mus1 SINE Alu 1 148 0 3 678 1217 62 0 0 chr17 12215091 12215237 -83057414 + B1_Mus1 SINE Alu 1 146 -2 3 678 21 57 0 0 chr17 12215373 12215408 -83057243 + AT_rich Low_complexity Low_complexity 1 35 0 3 678 8304 165 118 20 chr17 12215564 12216959 -83055692 - L1VL2 LINE L1 -2595 3282 1708 3 678 207 0 0 0 chr17 12216959 12216982 -83055669 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 678 1113 53 0 0 chr17 12216986 12217117 -83055534 - B1_Mm SINE Alu -15 132 2 3 678 8304 125 129 21 chr17 12217117 12217660 -83054991 - L1VL2 LINE L1 -4170 1707 1124 3 678 1324 78 15 25 chr17 12217660 12217856 -83054795 - B2_Mm2 SINE B2 0 195 2 3 678 4619 47 151 23 chr17 12217856 12218332 -83054319 - L1VL2 LINE L1 -5511 1123 603 3 678 298 305 427 65 chr17 12218332 12218602 -83054049 - RLTR20A1 LTR ERVK -95 439 72 3 678 1057 77 0 0 chr17 12218621 12218751 -83053900 + B1_Mus1 SINE Alu 2 131 -17 3 678 2967 86 55 79 chr17 12220012 12220363 -83052288 - MT2_Mm LTR ERVL 0 493 124 3 678 1170 51 0 0 chr17 12220363 12220501 -83052150 + B1_Mm SINE Alu 1 138 -9 3 678 2967 86 55 79 chr17 12220501 12220654 -83051997 - MT2_Mm LTR ERVL -370 123 1 3 678 35 0 0 0 chr17 12220661 12220696 -83051955 + AT_rich Low_complexity Low_complexity 1 35 0 3 678 268 174 0 0 chr17 12221001 12221047 -83051604 - HERV16-int LTR ERVL -887 4109 4064 3 678 783 302 106 8 chr17 12221576 12221830 -83050821 - MLT1A0 LTR MaLR -8 357 79 3 678 251 320 153 14 chr17 12222956 12223155 -83049496 + MIRb SINE MIR 9 250 -18 3 678 284 226 32 0 chr17 12223262 12223324 -83049327 + ORR1D2 LTR MaLR 295 358 -12 3 678 605 152 0 62 chr17 12223426 12223538 -83049113 - B1_Mur4 SINE Alu -6 144 40 3 678 261 151 54 54 chr17 12223648 12223704 -83048947 - B1_Mus1 SINE Alu -92 56 1 3 678 522 0 0 0 chr17 12224033 12224091 -83048560 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 3 678 441 76 0 0 chr17 12224805 12224871 -83047780 + (TG)n Simple_repeat Simple_repeat 2 67 0 3 678 1068 73 15 0 chr17 12226067 12226203 -83046448 - B1_Mus1 SINE Alu -10 138 1 3 678 1343 80 16 21 chr17 12227086 12227277 -83045374 - B2_Mm2 SINE B2 0 195 6 3 678 363 269 0 14 chr17 12227350 12227634 -83045017 + (CA)n Simple_repeat Simple_repeat 1 279 0 3 678 325 266 38 25 chr17 12227535 12227693 -83044958 + (CATA)n Simple_repeat Simple_repeat 3 162 0 3 678 568 139 54 5 chr17 12228774 12228879 -83043772 + B1_Mm SINE Alu 14 146 -1 3 678 297 0 0 0 chr17 12228879 12228912 -83043739 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 3 678 300 111 0 0 chr17 12229128 12229182 -83043469 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 678 870 114 0 30 chr17 12229669 12229804 -83042847 - B1_Mus1 SINE Alu -6 142 12 3 678 714 162 94 14 chr17 12229813 12229951 -83042700 - B1_Mur2 SINE Alu 0 149 1 3 678 2365 86 3 61 chr17 12230354 12230700 -83041951 - ORR1A2 LTR MaLR -1 326 1 3 678 597 191 7 42 chr17 12230842 12230984 -83041667 - Lx7 LINE L1 0 7696 7560 3 678 1123 60 0 0 chr17 12230984 12231118 -83041533 + B1_Mus1 SINE Alu 1 134 -14 3 678 1422 74 21 0 chr17 12231134 12231324 -83041327 + B2_Mm2 SINE B2 2 195 0 3 678 444 83 0 0 chr17 12231324 12231384 -83041267 - B2_Mm2 SINE B2 -135 60 1 3 678 1247 213 126 20 chr17 12231394 12231840 -83040811 - Lx7 LINE L1 -396 7300 6808 3 678 457 143 13 0 chr17 12233032 12233109 -83039542 + B2_Mm2 SINE B2 2 79 -116 3 678 207 69 0 0 chr17 12233502 12233531 -83039120 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 678 195 139 0 0 chr17 12233923 12233959 -83038692 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 3 678 976 102 0 21 chr17 12233960 12234100 -83038551 - B1_Mus2 SINE Alu -2 145 9 3 678 481 255 43 50 chr17 12233969 12234130 -83038521 - B4A SINE B4 -73 219 60 3 678 691 286 133 13 chr17 12234653 12234954 -83037697 - MLT1A0 LTR MaLR 0 365 29 3 678 304 296 43 82 chr17 12236212 12236396 -83036255 - L1MEb LINE L1 -5084 986 810 3 678 1074 208 135 8 chr17 12236401 12236668 -83035983 + MTC LTR MaLR 1 301 -120 3 678 189 107 0 0 chr17 12236673 12236701 -83035950 + (CATTT)n Simple_repeat Simple_repeat 3 30 0 3 678 902 104 7 15 chr17 12236702 12236838 -83035813 - B1_Mus1 SINE Alu -12 136 2 3 678 284 64 0 21 chr17 12236955 12237003 -83035648 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 678 1243 21 14 0 chr17 12237033 12237177 -83035474 + B1_Mus2 SINE Alu 2 147 0 3 678 60 56 0 23 chr17 12238439 12238567 -83034084 + AT_rich Low_complexity Low_complexity 1 125 0 3 678 691 230 163 0 chr17 12239398 12239576 -83033075 - B3 SINE B2 -9 207 1 3 678 477 288 43 0 chr17 12240048 12240187 -83032464 + ID_B1 SINE B4 80 224 0 3 678 485 286 75 29 chr17 12240223 12240396 -83032255 - RMER5 LTR ERV1 -195 339 159 3 678 803 260 15 40 chr17 12241121 12241321 -83031330 - MTEb LTR MaLR -172 207 13 3 678 265 333 23 0 chr17 12241756 12241843 -83030808 - L2c LINE L2 -41 3346 3258 3 678 204 203 157 95 chr17 12242841 12242959 -83029692 - MIR SINE MIR -123 139 14 3 678 408 88 0 0 chr17 12244434 12244491 -83028160 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 678 407 301 39 34 chr17 12245375 12245554 -83027097 - RMER5 LTR ERV1 0 534 355 3 678 410 35 0 0 chr17 12246522 12246579 -83026072 - ORR1A4 LTR MaLR -272 57 1 3 678 11026 129 19 111 chr17 12246579 12248740 -83023911 - ORR1A4-int LTR MaLR 0 1963 1 3 678 2027 131 3 27 chr17 12248744 12249073 -83023578 - ORR1A4 LTR MaLR -8 321 1 3 678 22 0 0 0 chr17 12249575 12249597 -83023054 + AT_rich Low_complexity Low_complexity 1 22 0 3 678 781 31 0 0 chr17 12249605 12249684 -83022967 + B1_Mm SINE Alu 3 81 -66 3 678 575 234 80 8 chr17 12249684 12249809 -83022842 + RSINE1 SINE B4 4 137 -28 3 678 1357 82 27 0 chr17 12249849 12250033 -83022618 - B2_Mm2 SINE B2 -6 189 1 3 678 912 140 208 0 chr17 12250058 12250236 -83022415 + B3 SINE B2 2 216 0 3 678 737 232 109 16 chr17 12250378 12250571 -83022080 - B3 SINE B2 -3 213 3 3 678 935 179 40 152 chr17 12251111 12251292 -83021359 - RLTR25B LTR ERVK 0 1103 934 3 678 564 15 0 0 chr17 12251292 12251357 -83021294 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 678 383 0 21 0 chr17 12251357 12251403 -83021248 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 678 935 179 40 152 chr17 12251403 12251523 -83021128 - RLTR25B LTR ERVK -170 933 836 3 678 3433 173 127 20 chr17 12251938 12252645 -83020006 - RLTR25B LTR ERVK -245 783 1 3 678 1114 89 0 7 chr17 12252852 12252999 -83019652 + B1_Mus1 SINE Alu 3 148 0 3 678 732 229 84 50 chr17 12253709 12253911 -83018740 - ID_B1 SINE B4 0 224 16 3 678 276 175 0 0 chr17 12255548 12255611 -83017040 + T-rich Low_complexity Low_complexity 1 63 0 3 678 745 266 18 6 chr17 12256560 12256730 -83015921 + B3A SINE B2 1 172 -26 3 678 198 0 0 0 chr17 12256771 12256793 -83015858 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 678 518 0 16 0 chr17 12256794 12256856 -83015795 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 4 678 908 242 37 19 chr17 12256882 12257097 -83015554 + B4A SINE B4 1 219 -73 4 678 314 263 148 39 chr17 12256985 12257242 -83015409 - RMER17D2 LTR ERVK -205 604 320 4 678 276 30 0 0 chr17 12257242 12257275 -83015376 + (CAGA)n Simple_repeat Simple_repeat 1 33 0 4 678 587 144 46 1 chr17 12257405 12257486 -83015165 - MTEb LTR MaLR -2 377 243 4 678 663 229 271 30 chr17 12257486 12257788 -83014863 + MTEa LTR MaLR 3 377 -2 4 678 882 280 9 41 chr17 12257788 12258031 -83014620 - MTEb LTR MaLR -137 242 7 4 678 21 0 0 0 chr17 12258655 12258676 -83013975 + AT_rich Low_complexity Low_complexity 1 21 0 4 678 280 285 260 0 chr17 12258749 12258872 -83013779 + RSINE1 SINE B4 4 158 -7 4 678 207 0 0 0 chr17 12259292 12259315 -83013336 + (CACCC)n Simple_repeat Simple_repeat 3 25 0 4 678 450 0 0 0 chr17 12259489 12259539 -83013112 + (TC)n Simple_repeat Simple_repeat 1 50 0 4 678 306 0 0 0 chr17 12259539 12259572 -83013079 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 678 278 268 35 11 chr17 12260111 12260198 -83012453 - MER58A DNA MER1_type -4 220 132 4 678 363 45 0 0 chr17 12260207 12260251 -83012400 - HAL1-3A_ME LINE L1 -838 2020 1977 4 678 315 313 0 0 chr17 12260259 12260409 -83012242 + (TG)n Simple_repeat Simple_repeat 1 150 0 4 678 872 294 35 24 chr17 12260430 12260719 -83011932 - B4 SINE B4 0 292 1 4 678 235 303 39 39 chr17 12260727 12260830 -83011821 - MER58A DNA MER1_type -90 134 32 4 678 220 260 0 0 chr17 12260868 12260918 -83011733 + ID2 SINE ID 2 51 -32 4 678 2022 126 3 101 chr17 12261002 12261347 -83011304 + RLTR10E LTR ERVK 1 311 0 4 678 656 78 33 0 chr17 12261347 12261437 -83011214 + MMERVK10C-int LTR ERVK 1 93 -7488 4 678 234 245 19 19 chr17 12261437 12261491 -83011160 + RLTR27 LTR ERVK 222 275 -34 4 678 57509 80 2 11 chr17 12261491 12268916 -83003735 + MMERVK10C-int LTR ERVK 225 7581 0 4 678 1994 125 0 117 chr17 12268916 12269268 -83003383 + RLTR10E LTR ERVK 1 311 0 4 678 414 0 0 0 chr17 12269727 12269773 -83002878 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 678 255 232 41 228 chr17 12271016 12271139 -83001512 + ORR1E LTR MaLR 1 100 -259 4 678 624 62 0 0 chr17 12271200 12271281 -83001370 + (TC)n Simple_repeat Simple_repeat 2 82 0 4 678 2394 66 3 59 chr17 12272377 12272715 -82999936 + ORR1A2 LTR MaLR 1 319 -8 4 678 813 223 134 11 chr17 12272751 12272883 -82999768 + B3 SINE B2 2 157 -59 4 678 468 0 0 0 chr17 12272883 12272935 -82999716 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 678 813 223 134 11 chr17 12272935 12272988 -82999663 + B3 SINE B2 158 210 -6 4 678 282 278 14 0 chr17 12274219 12274291 -82998360 - ID4 SINE ID -10 73 1 4 678 1252 34 0 0 chr17 12274391 12274537 -82998114 - B1_Mus2 SINE Alu 0 147 2 4 678 675 268 27 45 chr17 12274537 12274805 -82997846 - RMER17C LTR ERVK -29 381 21 4 678 210 338 84 0 chr17 12274819 12274890 -82997761 - BC1_Mm scRNA scRNA -75 77 1 4 678 325 204 50 11 chr17 12274910 12275000 -82997651 - PB1D10 SINE Alu -7 113 22 4 678 241 257 13 106 chr17 12275764 12275877 -82996774 - PB1D7 SINE Alu -35 113 1 4 678 26 0 0 0 chr17 12275932 12275958 -82996693 + AT_rich Low_complexity Low_complexity 1 26 0 4 678 3504 234 55 75 chr17 12276065 12276230 -82996421 - Lx9 LINE L1 -317 7327 7200 4 678 1232 41 7 0 chr17 12276230 12276376 -82996275 - B1_Mus2 SINE Alu 0 147 1 4 678 3504 234 55 75 chr17 12276376 12276779 -82995872 - Lx9 LINE L1 -445 7199 6812 4 678 1342 90 21 5 chr17 12276779 12276968 -82995683 - B2_Mm2 SINE B2 -1 194 3 4 678 3504 234 55 75 chr17 12276968 12277459 -82995192 - Lx9 LINE L1 -833 6811 6289 4 678 501 277 153 41 chr17 12277923 12278119 -82994532 + ID_B1 SINE B4 7 224 0 4 678 315 0 0 0 chr17 12278131 12278166 -82994485 + (CAA)n Simple_repeat Simple_repeat 2 36 0 4 678 360 0 0 0 chr17 12278512 12278552 -82994099 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 678 602 68 0 11 chr17 12278907 12278996 -82993655 + (TG)n Simple_repeat Simple_repeat 1 88 0 4 678 690 301 63 40 chr17 12279259 12279610 -82993041 - RLTR16 LTR ERVK -256 436 24 4 678 837 243 23 23 chr17 12279666 12279881 -82992770 - B3 SINE B2 0 216 2 4 678 649 230 170 19 chr17 12279881 12279892 -82992759 - B4 SINE B4 -62 230 206 4 678 243 257 112 56 chr17 12279892 12279999 -82992652 - PB1D7 SINE Alu -7 113 1 4 678 649 230 170 19 chr17 12279999 12280080 -82992571 - B4 SINE B4 -62 205 2 4 678 200 355 13 13 chr17 12280332 12280486 -82992165 + (CATATA)n Simple_repeat Simple_repeat 5 158 0 4 678 2050 146 27 6 chr17 12280506 12280837 -82991814 + ORR1A1 LTR MaLR 1 338 -8 4 678 8810 102 34 5 chr17 12281520 12282959 -82989692 - Lx4A LINE L1 -173 6885 5404 4 678 650 315 88 39 chr17 12283037 12283321 -82989330 - MLT1A0 LTR MaLR -6 359 62 4 678 1230 100 0 0 chr17 12284914 12285094 -82987557 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 4 678 776 267 117 34 chr17 12285124 12285508 -82987143 - Lx9 LINE L1 -4 7640 7225 4 678 297 0 0 0 chr17 12286032 12286065 -82986586 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 678 260 191 0 29 chr17 12286423 12286493 -82986158 + (CATA)n Simple_repeat Simple_repeat 1 68 0 4 678 302 303 2 28 chr17 12286514 12286636 -82986015 + Lx9 LINE L1 5738 5892 -1752 4 678 2382 96 9 15 chr17 12286640 12286968 -82985683 + ORR1A3 LTR MaLR 1 326 0 4 678 301 242 110 0 chr17 12287399 12287490 -82985161 + MLT1B LTR MaLR 69 169 -221 4 678 395 310 31 37 chr17 12288103 12288264 -82984387 + Tigger15a DNA TcMar 432 591 -124 4 678 321 185 0 0 chr17 12288520 12288585 -82984066 + A-rich Low_complexity Low_complexity 1 65 0 4 678 1070 240 0 37 chr17 12288585 12288816 -82983835 - MTEa LTR MaLR -30 349 128 4 678 2327 117 46 37 chr17 12288816 12289205 -82983446 - ORR1A2 LTR MaLR 0 379 1 4 678 4688 64 3 0 chr17 12289205 12289787 -82982864 - MT2B2 LTR ERVL 0 584 1 4 678 500 279 46 173 chr17 12289787 12289830 -82982821 - ORR1A2 LTR MaLR -333 46 2 4 678 471 191 0 78 chr17 12289996 12290098 -82982553 + ORR1E LTR MaLR 1 94 -265 4 678 1055 135 79 88 chr17 12290123 12290350 -82982301 + URR1A DNA MER1_type 1 225 -1 4 678 284 194 183 104 chr17 12290462 12290539 -82982112 + ORR1E LTR MaLR 256 336 -43 4 678 1035 204 48 5 chr17 12290539 12290746 -82981905 - B3 SINE B2 0 216 1 4 678 284 194 183 104 chr17 12290746 12290783 -82981868 + ORR1E LTR MaLR 337 379 0 4 678 188 264 18 36 chr17 12291318 12291373 -82981278 - MIR3 SINE MIR -51 157 104 4 678 449 17 17 0 chr17 12291722 12291780 -82980871 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 678 198 0 0 0 chr17 12291893 12291915 -82980736 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 678 601 234 41 58 chr17 12291917 12292089 -82980562 - B4A SINE B4 -122 170 2 4 678 1105 326 60 6 chr17 12292237 12292601 -82980050 + MLT1B LTR MaLR 5 388 -2 4 678 398 258 127 90 chr17 12292643 12292829 -82979822 + MTEa LTR MaLR 47 279 -100 4 678 1767 168 93 12 chr17 12292829 12293173 -82979478 - ORR1D1 LTR MaLR 0 374 3 4 678 398 246 53 112 chr17 12293173 12293269 -82979382 + MTEa LTR MaLR 280 378 -1 4 678 686 248 188 32 chr17 12294262 12294512 -82978139 + B4A SINE B4 2 290 -2 4 678 362 21 0 21 chr17 12294555 12294603 -82978048 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 678 589 288 20 0 chr17 12294640 12294786 -82977865 + MER5A DNA MER1_type 41 189 0 4 678 21 0 0 0 chr17 12294930 12294951 -82977700 + AT_rich Low_complexity Low_complexity 1 21 0 4 678 447 52 0 0 chr17 12296046 12296104 -82976547 + (TATG)n Simple_repeat Simple_repeat 3 60 0 4 678 476 271 47 60 chr17 12296117 12296266 -82976385 - RSINE1 SINE B4 -17 148 2 4 678 1210 61 0 0 chr17 12296592 12296739 -82975912 + B1_Mus1 SINE Alu 2 148 0 4 678 604 206 193 6 chr17 12296771 12296942 -82975709 - B3 SINE B2 -9 207 5 4 678 386 253 32 0 chr17 12297021 12297116 -82975535 + MER53 DNA hAT 8 105 -88 4 678 219 316 86 26 chr17 12297282 12297399 -82975252 + L2 LINE L2 2329 2452 -967 4 678 409 261 77 97 chr17 12297497 12297837 -82974814 - RMER10A LTR ERVL -92 350 18 4 678 216 0 0 0 chr17 12297908 12297932 -82974719 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 678 2393 136 60 10 chr17 12298007 12298408 -82974243 - MTC LTR MaLR 0 421 1 4 678 22 0 0 0 chr17 12298655 12298677 -82973974 + AT_rich Low_complexity Low_complexity 1 22 0 4 678 241 310 17 0 chr17 12299042 12299100 -82973551 - ID4_ SINE ID -17 66 8 4 678 229 346 76 69 chr17 12299125 12299380 -82973271 - L1ME3A LINE L1 -1 6172 5921 4 678 758 200 14 7 chr17 12299380 12299526 -82973125 - B1_Mur2 SINE Alu 0 149 3 4 678 229 346 76 69 chr17 12299526 12299720 -82972931 - L1ME3A LINE L1 -253 5920 5720 4 678 243 0 0 0 chr17 12299887 12299914 -82972737 + (TCTCTG)n Simple_repeat Simple_repeat 4 30 0 4 678 574 214 56 14 chr17 12299946 12300088 -82972563 - B1_Mur2 SINE Alu 0 149 2 4 678 523 304 127 20 chr17 12300194 12300644 -82972007 - L1ME3A LINE L1 -743 5403 4906 4 678 1488 127 5 5 chr17 12300684 12300905 -82971746 + URR1A DNA MER1_type 2 222 -4 4 678 224 354 37 0 chr17 12301125 12301207 -82971444 - PB1D7 SINE Alu -11 109 25 4 678 392 338 78 9 chr17 12301266 12301597 -82971054 - L1ME3A LINE L1 -1459 4687 4334 4 678 1164 88 0 0 chr17 12301622 12301770 -82970881 + B1_Mus1 SINE Alu 1 148 0 4 678 376 367 33 0 chr17 12301864 12302014 -82970637 - MLT1G LTR MaLR -117 474 320 4 678 419 300 99 8 chr17 12303320 12303441 -82969210 - RSINE1 SINE B4 -31 134 3 4 678 1246 101 36 21 chr17 12303449 12303641 -82969010 - B2_Mm2 SINE B2 0 195 1 4 678 414 0 0 0 chr17 12303822 12303868 -82968783 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 678 376 207 12 12 chr17 12303890 12303973 -82968678 + ID4 SINE ID 1 83 0 4 678 184 239 0 33 chr17 12303973 12304064 -82968587 + GA-rich Low_complexity Low_complexity 1 88 0 4 678 438 297 57 42 chr17 12304138 12304331 -82968320 + RMER15 LTR ERVL 378 573 -2 4 678 219 206 231 31 chr17 12304336 12304401 -82968250 + ID4_ SINE ID 2 79 -4 4 678 231 204 0 0 chr17 12304422 12304466 -82968185 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 678 1048 66 22 213 chr17 12304530 12304680 -82967971 + B2_Mm2 SINE B2 1 111 -84 4 678 1175 43 0 21 chr17 12304680 12304824 -82967827 - B1_Mus1 SINE Alu -6 142 2 5 678 1048 66 22 213 chr17 12304824 12304903 -82967748 + B2_Mm2 SINE B2 112 186 -9 4 678 1128 43 7 0 chr17 12304933 12305071 -82967580 - B1_Mus1 SINE Alu 0 148 10 5 678 539 263 9 9 chr17 12305310 12305425 -82967226 - PB1D10 SINE Alu -2 115 1 5 678 372 242 21 62 chr17 12305579 12305676 -82966975 + ID_B1 SINE B4 107 199 -25 5 678 316 342 0 0 chr17 12306716 12306795 -82965856 - B3A SINE B2 -116 82 4 5 678 335 247 12 0 chr17 12306802 12306883 -82965768 - MER5A1 DNA MER1_type -41 125 44 5 678 414 0 0 0 chr17 12307006 12307052 -82965599 + (TAGA)n Simple_repeat Simple_repeat 2 47 0 5 678 304 246 0 80 chr17 12307081 12307156 -82965495 + ID4 SINE ID 3 71 -12 5 678 1296 38 0 0 chr17 12307162 12307320 -82965331 + (TTTC)n Simple_repeat Simple_repeat 4 161 0 5 678 242 380 51 28 chr17 12307524 12307700 -82964951 - MLT1C LTR MaLR -86 381 202 5 678 333 256 0 13 chr17 12307802 12307881 -82964770 - MLT1C LTR MaLR -336 131 54 5 678 454 148 45 11 chr17 12307975 12308064 -82964587 + MTE2b LTR MaLR 16 107 -272 5 678 1919 116 112 59 chr17 12308117 12308474 -82964177 + ORR1C1 LTR MaLR 3 378 0 5 678 476 291 26 60 chr17 12308476 12308656 -82963995 + B3A SINE B2 30 201 -15 5 678 495 238 0 0 chr17 12308680 12308852 -82963799 + (CA)n Simple_repeat Simple_repeat 1 172 0 5 678 242 136 23 0 chr17 12308863 12308907 -82963744 - MTE2b LTR MaLR -29 350 306 5 678 519 185 95 229 chr17 12308947 12309178 -82963473 - B3 SINE B2 -16 200 1 5 678 27 29 0 0 chr17 12309190 12309224 -82963427 + AT_rich Low_complexity Low_complexity 1 34 0 5 678 342 0 0 0 chr17 12309997 12310035 -82962616 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 5 678 276 192 115 0 chr17 12310035 12310083 -82962568 - B1_Mm SINE Alu -8 139 89 5 678 738 201 20 14 chr17 12310083 12310229 -82962422 - B1_Mur3 SINE Alu -1 148 2 5 678 276 192 115 0 chr17 12310229 12310251 -82962400 - B1_Mm SINE Alu -59 88 61 5 678 1404 70 21 0 chr17 12310353 12310540 -82962111 + B2_Mm2 SINE B2 2 192 -3 5 678 387 105 0 0 chr17 12310748 12310805 -82961846 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 678 422 280 71 49 chr17 12310805 12310979 -82961672 - B3A SINE B2 -15 183 5 5 678 218 278 0 18 chr17 12314003 12314058 -82958593 + ID4 SINE ID 2 55 -28 5 678 432 0 0 0 chr17 12314813 12314861 -82957790 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 678 207 0 0 0 chr17 12315365 12315388 -82957263 + (T)n Simple_repeat Simple_repeat 1 23 0 5 678 1186 48 14 0 chr17 12315388 12315533 -82957118 - B1_Mus2 SINE Alu 0 147 1 5 678 285 29 0 0 chr17 12315812 12315846 -82956805 + (CTTTG)n Simple_repeat Simple_repeat 1 34 0 5 678 21 36 0 0 chr17 12316527 12316555 -82956096 + AT_rich Low_complexity Low_complexity 1 28 0 5 678 1222 116 16 26 chr17 12316560 12316754 -82955897 - B2_Mm2 SINE B2 0 195 4 5 678 872 146 169 15 chr17 12317002 12317197 -82955454 - URR1B DNA MER1_type 0 225 1 5 678 797 200 7 0 chr17 12317226 12317371 -82955280 - B1_Mur4 SINE Alu 0 150 5 5 678 661 274 13 72 chr17 12317371 12317462 -82955189 - ID_B1 SINE B4 0 224 3 5 678 240 35 0 0 chr17 12317656 12317685 -82954966 + (CGG)n Simple_repeat Simple_repeat 2 30 0 5 678 556 317 65 84 chr17 12318274 12318656 -82953995 - MTEb LTR MaLR -4 375 1 5 678 630 306 25 25 chr17 12318954 12319152 -82953499 - MER20 DNA MER1_type -21 198 1 5 678 509 267 124 34 chr17 12320291 12320500 -82952151 - MTE2a LTR MaLR -9 370 143 5 678 736 256 66 24 chr17 12320492 12320704 -82951947 - MTE2a LTR MaLR -158 221 1 5 679 507 33 0 0 chr17 12321830 12321891 -82950760 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 679 311 221 107 148 chr17 12322225 12322237 -82950414 + PB1D10 SINE Alu 1 45 -72 5 679 387 250 138 21 chr17 12322237 12322331 -82950320 + ID_B1 SINE B4 104 208 -16 5 679 311 221 107 148 chr17 12322331 12322347 -82950304 + PB1D10 SINE Alu 46 117 0 5 679 310 231 0 2 chr17 12323924 12323988 -82948663 - B1F SINE Alu -7 142 77 5 679 335 312 98 30 chr17 12324996 12325128 -82947523 - RSINE1 SINE B4 -10 155 15 5 679 420 280 59 45 chr17 12325097 12325126 -82947525 + CYRA11_Mm Unknown Y-chromosome 141 172 -445 5 679 1274 194 9 0 chr17 12325126 12325343 -82947308 - URR1B DNA MER1_type 0 225 7 5 679 323 263 61 42 chr17 12325382 12325612 -82947039 - L1MB8 LINE L1 -2 6176 5935 5 679 1919 147 92 27 chr17 12325871 12326241 -82946410 + ORR1B1 LTR MaLR 1 394 0 5 679 543 302 16 0 chr17 12326397 12326526 -82946125 - ID_B1 SINE B4 -8 216 86 5 679 975 293 35 32 chr17 12327475 12327757 -82944894 - B4A SINE B4 -4 288 6 5 679 201 184 26 0 chr17 12328229 12328267 -82944384 + L2b LINE L2 3333 3371 -4 5 679 194 200 43 22 chr17 12328421 12328467 -82944184 + MIRm SINE MIR 103 149 -127 5 679 759 249 58 0 chr17 12328584 12328757 -82943894 + B3 SINE B2 27 209 -7 5 679 225 0 0 0 chr17 12328767 12328792 -82943859 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 5 679 1233 42 0 0 chr17 12328792 12328936 -82943715 - B1_Mus1 SINE Alu -3 145 2 5 679 337 256 163 43 chr17 12329289 12329546 -82943105 + B4A SINE B4 2 289 -3 5 679 303 288 0 29 chr17 12329653 12329721 -82942930 - L1MEf LINE L1 -4128 2072 2007 5 679 1992 141 74 32 chr17 12329778 12330158 -82942493 - RMER10B LTR ERVL -2 396 1 5 679 561 168 0 19 chr17 12330285 12330388 -82942263 - B1_Mur2 SINE Alu -7 142 42 5 679 339 215 0 71 chr17 12330409 12330494 -82942157 + PB1D10 SINE Alu 39 117 0 5 679 327 258 131 20 chr17 12330772 12330871 -82941780 + B1F SINE Alu 35 144 -5 5 679 248 312 6 110 chr17 12331708 12331881 -82940770 - LTR77 LTR ERV1 -272 350 196 5 679 595 208 17 102 chr17 12331878 12332055 -82940596 - RSINE1 SINE B4 -1 164 3 5 679 309 100 0 0 chr17 12332217 12332267 -82940384 + (TGAA)n Simple_repeat Simple_repeat 1 50 0 5 679 1212 183 10 0 chr17 12333835 12334043 -82938608 + B3 SINE B2 2 211 -5 5 679 1230 41 0 13 chr17 12334226 12334375 -82938276 + B1_Mm SINE Alu 1 147 0 5 679 389 223 286 9 chr17 12335394 12335607 -82937044 + B4A SINE B4 3 274 -18 5 679 312 273 99 9 chr17 12336156 12336267 -82936384 + B1F SINE Alu 23 143 -6 5 679 286 303 52 22 chr17 12336267 12336291 -82936360 + B4A SINE B4 108 246 -46 5 679 231 373 70 23 chr17 12336326 12336455 -82936196 + RSINE1 SINE B4 3 137 -28 5 679 482 187 15 22 chr17 12336460 12336597 -82936054 + CT-rich Low_complexity Low_complexity 3 138 0 5 679 180 293 60 107 chr17 12336906 12337055 -82935596 - L4 LINE RTE -1145 884 743 5 679 207 69 0 0 chr17 12337596 12337625 -82935026 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 679 716 110 16 48 chr17 12338216 12338340 -82934311 - B1_Mur3 SINE Alu 0 149 30 5 679 612 129 0 0 chr17 12338341 12338442 -82934209 + (TAGA)n Simple_repeat Simple_repeat 1 101 0 5 679 426 121 0 0 chr17 12338701 12338767 -82933884 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 679 650 244 118 16 chr17 12338909 12338943 -82933708 - B3 SINE B2 0 216 165 5 679 489 97 0 0 chr17 12338943 12339015 -82933636 + (TG)n Simple_repeat Simple_repeat 1 72 0 5 679 650 244 118 16 chr17 12339015 12339167 -82933484 - B3 SINE B2 -52 164 11 5 679 416 72 0 14 chr17 12339921 12339991 -82932660 + (TC)n Simple_repeat Simple_repeat 2 70 0 5 679 337 182 74 4 chr17 12339997 12340243 -82932408 + (TCTA)n Simple_repeat Simple_repeat 1 263 0 5 679 1069 190 26 49 chr17 12340305 12340609 -82932042 - RMER17C LTR ERVK 0 410 114 5 679 209 108 27 0 chr17 12341027 12341064 -82931587 + (TC)n Simple_repeat Simple_repeat 1 38 0 5 679 192 97 0 0 chr17 12341150 12341181 -82931470 + (T)n Simple_repeat Simple_repeat 1 31 0 5 679 1048 113 0 39 chr17 12342649 12342805 -82929846 - B1_Mur4 SINE Alu 0 150 1 5 679 411 231 240 19 chr17 12343077 12343251 -82929400 + ID_B1 SINE B4 5 221 -3 5 679 225 208 19 0 chr17 12343689 12343707 -82928944 + (TA)n Simple_repeat Simple_repeat 1 19 0 5 679 189 0 0 0 chr17 12343707 12343728 -82928923 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 679 225 208 19 0 chr17 12343728 12343762 -82928889 + (TA)n Simple_repeat Simple_repeat 1 34 0 5 679 1892 132 25 74 chr17 12343763 12344130 -82928521 - ORR1B1 LTR MaLR -8 386 38 5 679 333 208 0 0 chr17 12344130 12344207 -82928444 + (TA)n Simple_repeat Simple_repeat 1 77 0 5 679 207 0 0 0 chr17 12344973 12344996 -82927655 + (A)n Simple_repeat Simple_repeat 1 23 0 5 679 313 162 12 24 chr17 12345524 12345589 -82927062 - MT2A LTR ERVL 0 533 468 5 679 477 90 0 0 chr17 12345589 12345656 -82926995 + (CA)n Simple_repeat Simple_repeat 2 68 0 5 679 313 162 12 24 chr17 12345656 12345672 -82926979 - MT2A LTR ERVL -66 467 453 5 679 464 105 52 13 chr17 12345669 12345746 -82926905 - MT2A LTR ERVL -451 82 3 5 679 416 296 41 15 chr17 12346114 12346253 -82926398 - B1F SINE Alu -7 142 2 5 679 775 222 11 54 chr17 12346319 12346505 -82926146 - B3A SINE B2 -19 179 2 5 679 280 268 77 7 chr17 12346509 12346649 -82926002 - L1MA5 LINE L1 -3 6297 6142 5 679 291 324 55 7 chr17 12346682 12346860 -82925791 - L1M2c LINE L1 -5240 1928 1743 5 679 258 176 0 0 chr17 12348456 12348507 -82924144 + T-rich Low_complexity Low_complexity 1 51 0 5 679 441 0 0 0 chr17 12349040 12349089 -82923562 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 679 273 118 12 73 chr17 12350433 12350515 -82922136 + (TTAA)n Simple_repeat Simple_repeat 4 80 0 5 679 216 0 0 0 chr17 12350516 12350540 -82922111 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 679 675 216 26 88 chr17 12350547 12350740 -82921911 - B3A SINE B2 -17 181 1 6 679 319 236 0 77 chr17 12350882 12350960 -82921691 + ID4 SINE ID 2 73 -10 6 679 258 317 49 0 chr17 12350903 12350985 -82921666 + B4 SINE B4 18 103 -189 6 679 343 291 0 0 chr17 12350988 12351067 -82921584 + ID_B1 SINE B4 146 224 0 6 679 1214 83 0 0 chr17 12351193 12351350 -82921301 + B2_Mm2 SINE B2 2 158 -37 6 679 387 0 0 0 chr17 12351351 12351394 -82921257 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 6 679 827 190 40 17 chr17 12353311 12353488 -82919163 - URR1B DNA MER1_type 0 225 45 6 679 1104 194 293 101 chr17 12353814 12354261 -82918390 + MT2A LTR ERVL 1 533 0 6 679 1059 58 66 0 chr17 12354760 12354897 -82917754 - B1_Mus2 SINE Alu 0 147 2 6 679 516 234 201 26 chr17 12355033 12355222 -82917429 - ID_B1 SINE B4 -2 222 1 6 679 188 169 39 13 chr17 12355454 12355532 -82917119 + (TG)n Simple_repeat Simple_repeat 2 81 0 6 679 337 210 36 0 chr17 12355547 12355685 -82916966 + (TG)n Simple_repeat Simple_repeat 2 144 0 6 679 23 0 0 0 chr17 12356084 12356107 -82916544 + AT_rich Low_complexity Low_complexity 1 23 0 6 679 198 0 0 0 chr17 12356532 12356554 -82916097 + (CGTG)n Simple_repeat Simple_repeat 2 23 0 6 679 730 304 13 43 chr17 12359021 12359251 -82913400 + ID_B1 SINE B4 2 224 0 6 679 447 280 156 49 chr17 12359701 12359876 -82912775 + MTEb LTR MaLR 110 292 -87 6 679 718 217 224 44 chr17 12359876 12360059 -82912592 + B3 SINE B2 1 216 0 6 679 447 280 156 49 chr17 12360059 12360127 -82912524 + MTEb LTR MaLR 293 379 0 6 679 312 70 0 0 chr17 12361125 12361168 -82911483 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 6 679 315 241 64 104 chr17 12361907 12362032 -82910619 - B1F SINE Alu 0 120 1 6 679 307 60 0 39 chr17 12362756 12362808 -82909843 + (AGGGGG)n Simple_repeat Simple_repeat 4 53 0 6 679 248 271 103 23 chr17 12363174 12363261 -82909390 - L2b LINE L2 0 3375 3282 6 679 1036 184 97 0 chr17 12363317 12363523 -82909128 - URR1A DNA MER1_type 0 226 1 6 679 514 216 0 0 chr17 12364935 12365032 -82907619 + (TG)n Simple_repeat Simple_repeat 1 97 0 6 679 567 171 0 0 chr17 12365032 12365137 -82907514 + (TA)n Simple_repeat Simple_repeat 2 106 0 6 679 459 254 0 0 chr17 12365146 12365663 -82906988 + (TG)n Simple_repeat Simple_repeat 1 517 0 6 679 333 68 0 0 chr17 12365714 12365758 -82906893 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 679 419 242 0 4 chr17 12365760 12366006 -82906645 + (TG)n Simple_repeat Simple_repeat 1 244 0 6 679 391 283 66 8 chr17 12366006 12366127 -82906524 - RSINE1 SINE B4 0 165 38 6 679 871 256 99 121 chr17 12366578 12366942 -82905709 + MTE2b LTR MaLR 2 357 -22 6 679 1281 252 99 21 chr17 12367562 12367894 -82904757 - MTE2b LTR MaLR -20 359 2 6 679 230 278 37 0 chr17 12368909 12368963 -82903688 - L2b LINE L2 -2 3373 3318 6 679 726 301 139 78 chr17 12369093 12369485 -82903166 - MLT1G3 LTR MaLR 0 595 187 6 679 449 290 147 24 chr17 12369485 12369736 -82902915 + B4A SINE B4 1 282 -10 6 679 431 63 0 16 chr17 12369745 12369809 -82902842 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 679 726 301 139 78 chr17 12369809 12369961 -82902690 - MLT1G3 LTR MaLR -414 181 7 6 679 3264 150 196 10 chr17 12369970 12370591 -82902060 - RMER19A LTR ERVK 0 737 1 6 679 476 150 9 0 chr17 12370730 12370843 -82901808 + CT-rich Low_complexity Low_complexity 1 114 0 6 679 789 220 104 5 chr17 12370843 12371035 -82901616 - B3 SINE B2 -5 211 1 6 679 677 223 156 82 chr17 12371561 12371830 -82900821 + B4 SINE B4 4 292 0 6 679 243 219 62 0 chr17 12373621 12373685 -82898966 - MLT2C1 LTR ERVL -310 87 20 6 679 294 259 0 24 chr17 12374353 12374436 -82898215 - MIR SINE MIR -128 134 54 6 679 591 203 40 8 chr17 12374573 12374697 -82897954 - MER20 DNA MER1_type -71 148 21 6 679 229 252 169 25 chr17 12375074 12375192 -82897459 + ORR1E LTR MaLR 96 230 -129 6 679 1121 93 224 0 chr17 12375214 12375397 -82897254 - URR1A DNA MER1_type -1 225 2 6 679 369 304 44 0 chr17 12376001 12376136 -82896515 - B1F SINE Alu -8 141 1 6 679 611 229 76 139 chr17 12376579 12376717 -82895934 + RLTR15 LTR ERVK 1 135 -224 6 679 486 0 0 0 chr17 12376717 12376771 -82895880 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 679 611 229 76 139 chr17 12376771 12377012 -82895639 + RLTR15 LTR ERVK 136 356 -3 6 679 308 213 28 35 chr17 12377579 12377720 -82894931 + (TATAA)n Simple_repeat Simple_repeat 5 144 0 6 679 831 228 69 5 chr17 12378290 12378493 -82894158 - B3 SINE B2 0 216 1 6 679 311 360 72 26 chr17 12378657 12378851 -82893800 + L1MEg LINE L1 1066 1268 -4816 6 679 418 294 50 141 chr17 12379018 12379216 -82893435 + ID_B1 SINE B4 12 191 -33 6 679 405 58 0 0 chr17 12379218 12379270 -82893381 + (GGAA)n Simple_repeat Simple_repeat 3 54 0 6 679 197 282 132 35 chr17 12380052 12380166 -82892485 + MIRb SINE MIR 91 215 -53 6 679 519 210 50 8 chr17 12380864 12380984 -82891667 + MER53 DNA hAT 4 128 -65 6 679 658 242 51 19 chr17 12381452 12381608 -82891043 - RSINE1 SINE B4 -2 163 3 6 679 972 207 25 65 chr17 12382033 12382234 -82890417 + B3 SINE B2 9 201 -15 6 679 209 30 0 57 chr17 12382241 12382276 -82890375 + (TTTTTA)n Simple_repeat Simple_repeat 2 34 0 6 679 1200 61 0 0 chr17 12382281 12382428 -82890223 - B1_Mus1 SINE Alu 0 148 2 6 679 588 227 35 2 chr17 12382430 12382569 -82890082 - PB1D7 SINE Alu -2 147 2 6 679 1117 62 14 14 chr17 12382624 12382771 -82889880 - B1_Mus1 SINE Alu 0 148 2 6 679 252 292 135 0 chr17 12383376 12383465 -82889186 - PB1D7 SINE Alu -19 101 1 6 679 570 288 5 0 chr17 12383485 12383617 -82889034 - ID_B1 SINE B4 -13 211 81 6 679 333 322 51 17 chr17 12384282 12384399 -82888252 + Tigger7 DNA MER2_type 16 136 -2355 6 679 233 274 0 0 chr17 12384424 12384475 -82888176 + Tigger7 DNA MER2_type 224 274 -2217 6 679 1299 156 5 36 chr17 12385385 12385604 -82887047 + URR1A DNA MER1_type 7 218 -8 6 679 2147 129 118 88 chr17 12386201 12386634 -82886017 - RLTR41 LTR ERV1 0 446 1 6 679 317 189 27 0 chr17 12386748 12386822 -82885829 + (CATATA)n Simple_repeat Simple_repeat 4 79 0 6 679 252 0 0 0 chr17 12386822 12386850 -82885801 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 679 424 247 22 33 chr17 12386850 12386942 -82885709 - RMER5 LTR ERV1 -51 483 393 6 679 948 210 50 0 chr17 12386988 12387169 -82885482 - B3 SINE B2 -24 192 3 6 679 928 289 107 18 chr17 12387169 12387494 -82885157 - RMER5 LTR ERV1 -132 402 49 6 679 216 0 0 0 chr17 12388722 12388746 -82883905 + (GGCTG)n Simple_repeat Simple_repeat 3 26 0 6 679 567 275 117 66 chr17 12390284 12390634 -82882017 - RLTR9A LTR ERVK 0 368 1 6 679 316 120 271 24 chr17 12391936 12392021 -82880630 - PB1D10 SINE Alu -10 107 2 6 679 43 0 0 0 chr17 12392034 12392077 -82880574 + AT_rich Low_complexity Low_complexity 1 43 0 6 679 1007 270 52 52 chr17 12392102 12392446 -82880205 - MTEa LTR MaLR 0 379 36 6 679 1312 171 14 0 chr17 12392447 12392669 -82879982 + URR1B DNA MER1_type 1 225 0 6 679 456 19 0 0 chr17 12393456 12393509 -82879142 + (GA)n Simple_repeat Simple_repeat 2 54 0 6 679 268 262 16 0 chr17 12393824 12393885 -82878766 - MER44D DNA MER2_type -612 93 32 6 679 1049 180 224 33 chr17 12394092 12394402 -82878249 + ORR1C1 LTR MaLR 1 378 -6 6 679 1052 171 0 28 chr17 12394500 12394717 -82877934 - RMER10B LTR ERVL 0 398 188 6 679 246 128 0 0 chr17 12394717 12394756 -82877895 + (GGA)n Simple_repeat Simple_repeat 1 39 0 6 679 1024 169 92 32 chr17 12394762 12395013 -82877638 - RMER10B LTR ERVL -131 267 2 6 679 183 42 0 0 chr17 12395795 12395819 -82876832 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 679 584 132 31 0 chr17 12395937 12396066 -82876585 + GA-rich Low_complexity Low_complexity 1 133 0 6 679 195 129 0 0 chr17 12397151 12397182 -82875469 + (TCCC)n Simple_repeat Simple_repeat 3 33 0 6 679 21 0 0 0 chr17 12397182 12397203 -82875448 + AT_rich Low_complexity Low_complexity 1 21 0 6 679 1244 203 79 50 chr17 12397342 12397721 -82874930 - RMER10B LTR ERVL 0 398 9 6 679 198 175 32 95 chr17 12398529 12398592 -82874059 + L2a LINE L2 3320 3378 -48 6 679 198 0 0 0 chr17 12399571 12399593 -82873058 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 6 679 198 0 0 0 chr17 12399732 12399754 -82872897 + (TG)n Simple_repeat Simple_repeat 1 22 0 6 679 272 232 76 132 chr17 12399756 12399900 -82872751 - RSINE1 SINE B4 -25 140 5 6 679 393 56 233 27 chr17 12401061 12401134 -82871517 - BC1_Mm scRNA scRNA -64 88 1 6 679 466 280 67 75 chr17 12402065 12402320 -82870331 + B4 SINE B4 20 272 -20 6 679 276 30 0 0 chr17 12402355 12402388 -82870263 + (TC)n Simple_repeat Simple_repeat 1 33 0 6 679 200 122 41 0 chr17 12402388 12402437 -82870214 + (CAGA)n Simple_repeat Simple_repeat 4 54 0 6 679 620 309 28 28 chr17 12405670 12405883 -82866768 + B3A SINE B2 1 213 -3 6 679 1104 171 46 36 chr17 12410385 12410604 -82862047 - URR1B DNA MER1_type -4 221 1 6 679 438 94 0 0 chr17 12412177 12412241 -82860410 + (TG)n Simple_repeat Simple_repeat 1 64 0 6 679 267 31 0 0 chr17 12412241 12412272 -82860379 + (GA)n Simple_repeat Simple_repeat 1 32 0 6 679 597 292 176 4 chr17 12412691 12412935 -82859716 - MTE2b LTR MaLR -66 313 28 6 679 21 0 0 0 chr17 12416302 12416323 -82856328 + GC_rich Low_complexity Low_complexity 1 21 0 6 679 407 252 134 0 chr17 12417244 12417363 -82855288 + RSINE1 SINE B4 17 151 -14 6 679 225 245 0 0 chr17 12417407 12417456 -82855195 + RSINE1 SINE B4 103 151 -14 6 679 225 245 0 0 chr17 12417500 12417549 -82855102 + RSINE1 SINE B4 103 151 -14 7 679 309 321 7 81 chr17 12417835 12417984 -82854667 + L1MD LINE L1 3063 3200 -2946 7 679 333 385 83 14 chr17 12418109 12418459 -82854192 + L1M4 LINE L1 3443 3816 -2330 7 679 232 222 0 16 chr17 12418507 12418571 -82854080 + L1MD LINE L1 4245 4307 -1839 7 679 243 0 0 0 chr17 12418573 12418600 -82854051 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 679 432 335 31 38 chr17 12418794 12419083 -82853568 + L1M4 LINE L1 5073 5359 -787 7 679 593 262 25 18 chr17 12419094 12419257 -82853394 + RSINE1 SINE B4 2 165 0 7 679 297 273 0 0 chr17 12420297 12420363 -82852288 + RMER30 DNA MER1_type 137 202 0 7 679 1014 69 14 0 chr17 12421917 12422062 -82850589 - B1_Mm SINE Alu 0 147 1 7 679 180 0 0 0 chr17 12422764 12422784 -82849867 + (CA)n Simple_repeat Simple_repeat 2 21 0 7 679 245 250 0 0 chr17 12423304 12423356 -82849295 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 679 829 252 102 21 chr17 12423872 12424156 -82848495 + ORR1E LTR MaLR 5 311 -48 7 679 455 172 69 0 chr17 12424275 12424362 -82848289 - PB1D10 SINE Alu -11 106 14 7 679 289 274 213 9 chr17 12424379 12424604 -82848047 - L1_Rod LINE L1 -486 5361 5091 7 679 450 323 74 59 chr17 12424648 12424918 -82847733 - B4A SINE B4 -14 278 5 7 679 287 212 172 0 chr17 12429218 12429317 -82843334 + L1MA7 LINE L1 6170 6285 -6 7 679 351 98 0 0 chr17 12433626 12433687 -82838964 + (TG)n Simple_repeat Simple_repeat 1 61 0 7 679 23 33 0 0 chr17 12434440 12434470 -82838181 + AT_rich Low_complexity Low_complexity 1 30 0 7 679 264 167 0 0 chr17 12435582 12435630 -82837021 + (CAG)n Simple_repeat Simple_repeat 1 48 0 7 679 22 35 0 0 chr17 12435746 12435775 -82836876 + AT_rich Low_complexity Low_complexity 1 29 0 7 679 233 29 29 0 chr17 12437144 12437178 -82835473 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 679 968 128 7 0 chr17 12437906 12438054 -82834597 - B1_Mur4 SINE Alu -1 149 1 7 679 31 26 0 0 chr17 12441118 12441156 -82831495 + AT_rich Low_complexity Low_complexity 1 38 0 7 679 1825 153 97 19 chr17 12442854 12443215 -82829436 + RLTR44A LTR ERVK 1 389 -16 7 679 773 75 0 0 chr17 12443272 12443378 -82829273 + RLTR44-int LTR ERVK 876 981 -1831 7 679 3997 57 10 2 chr17 12443558 12444070 -82828581 + RLTR44-int LTR ERVK 973 1488 -1324 7 679 5028 35 0 0 chr17 12444382 12444981 -82827670 + RLTR44-int LTR ERVK 2214 2812 0 7 679 2020 154 91 36 chr17 12444981 12445365 -82827286 + RLTR44A LTR ERVK 1 405 0 7 679 302 218 0 0 chr17 12448219 12448274 -82824377 + B1F SINE Alu 61 115 -34 7 679 2279 148 27 0 chr17 12448630 12448996 -82823655 + MTC LTR MaLR 1 376 -45 7 679 234 297 71 18 chr17 12448997 12449110 -82823541 + Kanga2_a DNA Tc2 445 563 -325 7 679 209 30 61 0 chr17 12450340 12450373 -82822278 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 7 680 210 227 0 0 chr17 12451942 12451986 -82820665 - L2a LINE L2 -286 3140 3097 7 680 342 0 0 0 chr17 12452682 12452720 -82819931 + (GGA)n Simple_repeat Simple_repeat 3 40 0 7 680 185 0 40 0 chr17 12452720 12452745 -82819906 + (CAG)n Simple_repeat Simple_repeat 1 26 0 7 680 359 290 88 14 chr17 12453074 12453221 -82819430 - MER20 DNA MER1_type -61 158 1 7 680 255 279 0 81 chr17 12456373 12456459 -82816192 + ID4 SINE ID 4 82 -1 7 680 603 40 0 0 chr17 12457527 12457601 -82815050 + (CCA)n Simple_repeat Simple_repeat 1 74 0 7 680 216 0 0 0 chr17 12457601 12457625 -82815026 + (CAG)n Simple_repeat Simple_repeat 3 26 0 7 680 274 288 38 0 chr17 12459666 12459746 -82812905 + MER5B DNA MER1_type 96 178 0 7 680 196 179 146 3 chr17 12459796 12459861 -82812790 + MIRc SINE MIR 89 163 -113 7 680 259 210 15 61 chr17 12463217 12463283 -82809368 - ID4_ SINE ID -18 65 3 7 680 666 299 31 26 chr17 12465535 12465762 -82806889 + B4A SINE B4 63 290 -2 7 680 206 292 0 15 chr17 12465765 12465831 -82806820 + (CA)n Simple_repeat Simple_repeat 2 66 0 7 680 519 284 196 37 chr17 12466379 12466624 -82806027 + B4A SINE B4 3 286 -6 7 680 201 139 0 0 chr17 12466630 12466673 -82805978 + (TC)n Simple_repeat Simple_repeat 1 43 0 7 680 234 0 0 0 chr17 12467156 12467182 -82805469 + (TG)n Simple_repeat Simple_repeat 2 27 0 7 680 378 246 8 119 chr17 12467590 12467724 -82804927 + MT2B LTR ERVL 145 263 -338 7 680 843 213 0 0 chr17 12467620 12467761 -82804890 + B1_Mur1 SINE Alu 6 146 -3 7 680 556 275 37 42 chr17 12468264 12468454 -82804197 - B3A SINE B2 -5 193 5 7 680 209 219 0 0 chr17 12468716 12468757 -82803894 + L2b LINE L2 3102 3142 -233 7 680 964 244 64 11 chr17 12472043 12472308 -82800343 + B4A SINE B4 1 279 -13 7 680 441 221 28 46 chr17 12472370 12472479 -82800172 + PB1D9 SINE Alu 4 110 -10 7 680 674 213 148 32 chr17 12472493 12472682 -82799969 + B3 SINE B2 2 212 -4 7 680 197 286 0 0 chr17 12474539 12474581 -82798070 + MIRb SINE MIR 219 260 -8 7 680 309 193 241 0 chr17 12474588 12474671 -82797980 + PB1D10 SINE Alu 4 106 -11 7 680 306 339 26 0 chr17 12474791 12474906 -82797745 + Lx8 LINE L1 7153 7270 -203 7 680 21 0 0 0 chr17 12475013 12475034 -82797617 + AT_rich Low_complexity Low_complexity 1 21 0 7 680 26 50 0 0 chr17 12475074 12475114 -82797537 + AT_rich Low_complexity Low_complexity 1 40 0 7 680 313 230 40 26 chr17 12475455 12475531 -82797120 + ID4_ SINE ID 5 81 -2 7 680 1593 317 93 35 chr17 12475667 12476557 -82796094 + Lx7 LINE L1 6053 6994 -702 7 680 2848 97 66 59 chr17 12476560 12477032 -82795619 + IAPLTR2_Mm LTR ERVK 1 475 0 7 680 9672 49 66 74 chr17 12477033 12478513 -82794138 + IAPEz-int LTR ERVK 9 1477 -5004 7 680 1811 86 4 0 chr17 12478514 12478759 -82793892 + IAPEz-int LTR ERVK 2252 2497 -5183 7 680 13880 62 9 3 chr17 12478758 12480558 -82792093 + IAPEz-int LTR ERVK 4656 6466 -15 7 680 702 298 94 12 chr17 12480558 12480573 -82792078 + Lx8 LINE L1 6987 7003 -470 7 680 2849 97 66 59 chr17 12480573 12481045 -82791606 + IAPLTR2_Mm LTR ERVK 1 475 0 7 680 702 298 94 12 chr17 12481045 12481358 -82791293 + Lx8 LINE L1 7004 7342 -131 7 680 400 302 118 6 chr17 12482249 12482419 -82790232 + L1MEc LINE L1 719 907 -5493 7 680 365 202 68 0 chr17 12482476 12482639 -82790012 + (ACTAG)n Simple_repeat Simple_repeat 4 177 0 7 680 362 210 66 0 chr17 12482672 12482839 -82789812 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 7 680 325 216 58 23 chr17 12482881 12483109 -82789542 + (CAAGA)n Simple_repeat Simple_repeat 1 236 0 7 680 260 229 65 24 chr17 12483120 12483290 -82789361 + (ACTAG)n Simple_repeat Simple_repeat 1 177 0 7 680 2456 267 70 87 chr17 12484333 12484425 -82788226 + Lx7 LINE L1 6212 6292 -1404 7 680 1285 41 0 0 chr17 12484425 12484571 -82788080 - B1_Mus2 SINE Alu -1 146 1 7 680 2456 267 70 87 chr17 12484571 12485539 -82787112 + Lx7 LINE L1 6293 7254 -442 7 680 348 291 23 0 chr17 12485539 12485625 -82787026 + B1F SINE Alu 61 148 -1 7 680 403 235 3 62 chr17 12487608 12487745 -82784906 + PB1D9 SINE Alu 6 127 -20 7 680 279 0 0 0 chr17 12488246 12488277 -82784374 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 680 959 68 22 36 chr17 12488769 12488907 -82783744 - B1_Mm SINE Alu 0 147 12 7 680 1321 63 80 0 chr17 12489010 12489185 -82783466 + B2_Mm1a SINE B2 1 189 -4 7 680 207 100 0 0 chr17 12490491 12490521 -82782130 + (TTCTG)n Simple_repeat Simple_repeat 1 30 0 7 680 347 208 194 0 chr17 12490522 12490594 -82782057 - PB1D10 SINE Alu -17 100 15 7 680 278 309 147 11 chr17 12490527 12490622 -82782029 - ID_B1 SINE B4 -48 176 69 7 680 375 23 0 0 chr17 12491508 12491552 -82781099 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 7 680 247 219 26 64 chr17 12492572 12492650 -82780001 + L1M4 LINE L1 5192 5266 -880 7 680 305 339 8 40 chr17 12492700 12492826 -82779825 + L1M4 LINE L1 5468 5589 -595 7 680 330 196 0 0 chr17 12493468 12493524 -82779127 + MTD LTR MaLR 356 411 -8 7 680 1420 217 70 39 chr17 12494483 12495254 -82777397 + RMER1B Other Other 1 449 -617 7 680 385 288 50 25 chr17 12495464 12495585 -82777066 + B3 SINE B2 48 171 -45 7 680 195 69 0 0 chr17 12495585 12495614 -82777037 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 680 622 248 6 113 chr17 12496866 12497043 -82775608 - B3 SINE B2 -51 165 8 7 680 233 295 131 83 chr17 12498731 12498960 -82773691 + ORR1E LTR MaLR 11 250 -109 7 680 1418 61 33 0 chr17 12499220 12499401 -82773250 + B2_Mm2 SINE B2 2 188 -7 7 680 1158 68 7 0 chr17 12499489 12499635 -82773016 + B1_Mus1 SINE Alu 2 148 0 7 680 324 0 0 0 chr17 12500136 12500172 -82772479 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 680 198 321 155 0 chr17 12500541 12500625 -82772026 - MIR SINE MIR -82 180 84 2 680 297 238 0 0 chr17 12500984 12501064 -82771587 + CT-rich Low_complexity Low_complexity 1 80 0 3 680 335 319 69 123 chr17 12501406 12501739 -82770912 - ORR1E LTR MaLR -37 322 8 4 680 2458 281 161 47 chr17 12501764 12503075 -82769576 - MTE-int LTR MaLR -72 1508 49 5 680 465 311 60 37 chr17 12503329 12503677 -82768974 - ORR1E LTR MaLR -3 356 1 6 680 6930 60 18 1 chr17 12504152 12505037 -82767614 + L1_Mus3 LINE L1 5735 6634 -4 7 680 1083 50 50 0 chr17 12505452 12505592 -82767059 + B1_Mus2 SINE Alu 1 147 0 8 680 660 299 18 27 chr17 12505958 12506178 -82766473 + B4A SINE B4 2 219 -73 9 680 1028 236 89 46 chr17 12506547 12506827 -82765824 + B4A SINE B4 1 292 0 1 680 382 114 29 0 chr17 12506856 12506926 -82765725 + (GA)n Simple_repeat Simple_repeat 2 73 0 1 680 243 0 0 0 chr17 12507711 12507738 -82764913 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1 680 297 0 0 0 chr17 12507971 12508004 -82764647 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 680 224 100 0 24 chr17 12508985 12509026 -82763625 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1 680 381 286 147 38 chr17 12510044 12510255 -82762396 + MIR SINE MIR 10 243 -19 1 680 208 327 50 91 chr17 12513181 12513302 -82759349 + L2b LINE L2 3244 3359 -16 1 680 441 309 117 70 chr17 12513379 12513748 -82758903 + MER34A LTR ERV1 89 474 -97 1 680 1138 67 0 62 chr17 12513757 12513949 -82758702 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 680 387 30 14 56 chr17 12514248 12514319 -82758332 + (TTG)n Simple_repeat Simple_repeat 2 69 0 1 680 1142 83 0 0 chr17 12514319 12514456 -82758195 - B1_Mus2 SINE Alu -9 138 2 2 680 480 333 63 6 chr17 12514476 12514651 -82758000 + B3A SINE B2 12 196 -2 2 680 399 157 0 0 chr17 12515324 12515394 -82757257 + GA-rich Low_complexity Low_complexity 1 70 0 2 680 239 212 30 0 chr17 12515529 12515595 -82757056 + T-rich Low_complexity Low_complexity 4 71 0 2 680 594 234 163 6 chr17 12515750 12515922 -82756729 + B3 SINE B2 1 199 -17 2 680 1056 201 275 17 chr17 12516080 12516378 -82756273 - MTEb LTR MaLR -2 377 3 2 680 525 337 29 44 chr17 12516461 12516666 -82755985 - MLT1A1 LTR MaLR -35 373 172 2 680 310 325 55 31 chr17 12516672 12516799 -82755852 - B1_Mur3 SINE Alu -19 130 1 2 680 748 293 21 10 chr17 12516799 12516879 -82755772 - ID SINE ID -142 82 1 2 680 360 285 218 8 chr17 12516887 12517011 -82755640 - MLT1A1 LTR MaLR -215 150 1 2 680 425 250 29 43 chr17 12517011 12517129 -82755522 + MLT1C LTR MaLR 46 161 -306 2 680 219 114 0 0 chr17 12517146 12517181 -82755470 + (TGG)n Simple_repeat Simple_repeat 1 35 0 3 680 233 335 64 47 chr17 12517398 12517570 -82755081 + MLT1C LTR MaLR 281 455 -12 2 680 1180 270 100 21 chr17 12518378 12518757 -82753894 - MLT1C LTR MaLR -6 461 53 3 680 713 312 25 95 chr17 12519337 12519780 -82752871 - MLT2D LTR ERVL -2 412 1 3 680 378 0 0 0 chr17 12521367 12521409 -82751242 + (CATA)n Simple_repeat Simple_repeat 2 43 0 3 680 215 250 96 14 chr17 12521435 12521508 -82751143 + ID4 SINE ID 2 80 -3 3 680 230 0 33 0 chr17 12521963 12521993 -82750658 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 3 680 603 225 42 0 chr17 12522963 12523105 -82749546 - B1F1 SINE Alu -1 148 1 3 680 1524 63 0 5 chr17 12523545 12523736 -82748915 - B2_Mm2 SINE B2 -4 191 2 3 680 268 300 104 32 chr17 12523753 12523883 -82748768 - ORR1E LTR MaLR -3 376 226 3 680 488 262 116 14 chr17 12523905 12524052 -82748599 - ORR1E LTR MaLR -197 162 1 3 680 220 337 0 44 chr17 12524790 12524880 -82747771 + MIRb SINE MIR 180 265 -3 3 680 796 205 98 44 chr17 12525377 12525602 -82747049 + RMER20B LTR ERVK 128 364 -263 4 680 1224 47 0 33 chr17 12525610 12525763 -82746888 + B1_Mus1 SINE Alu 1 148 0 4 680 263 129 0 61 chr17 12525764 12525863 -82746788 + A-rich Low_complexity Low_complexity 3 95 0 4 680 2310 89 22 9 chr17 12525974 12526293 -82746358 - ORR1A2 LTR MaLR -4 323 1 4 680 716 218 126 16 chr17 12526293 12526475 -82746176 - B3 SINE B2 -14 202 1 4 680 280 333 66 100 chr17 12526499 12526781 -82745870 + B4 SINE B4 4 274 -18 4 680 261 0 0 0 chr17 12526841 12526870 -82745781 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 4 680 628 254 0 0 chr17 12526880 12527014 -82745637 - B1_Mur2 SINE Alu -11 138 5 4 680 2277 157 43 3 chr17 12527072 12527443 -82745208 + ORR1B1 LTR MaLR 1 386 -8 4 680 581 274 83 35 chr17 12527448 12527702 -82744949 - MER33 DNA MER1_type -58 266 1 4 680 189 242 45 61 chr17 12527722 12527788 -82744863 + L4 LINE RTE 1755 1819 -210 5 680 202 298 101 39 chr17 12528038 12528216 -82744435 - MIRb SINE MIR -31 237 49 5 680 199 139 0 122 chr17 12528199 12528248 -82744403 - L3 LINE CR1 -677 3812 3770 5 680 375 306 75 96 chr17 12529877 12530076 -82742575 - MIRb SINE MIR -34 234 40 5 680 467 225 39 30 chr17 12530562 12530724 -82741927 + L1MA4 LINE L1 5688 5888 -412 5 680 303 28 0 0 chr17 12530726 12530762 -82741889 + (CAGA)n Simple_repeat Simple_repeat 3 38 0 5 680 726 143 0 0 chr17 12531484 12531617 -82741034 + (GA)n Simple_repeat Simple_repeat 1 133 0 5 680 250 247 41 0 chr17 12531994 12532067 -82740584 + L1ME3A LINE L1 6088 6163 -10 5 680 711 258 22 45 chr17 12532081 12532146 -82740505 + Lx9 LINE L1 7197 7259 -385 5 680 4968 99 16 19 chr17 12532146 12532904 -82739747 - RMER6A LTR ERVK 0 756 1 5 680 711 258 22 45 chr17 12532904 12533061 -82739590 + Lx9 LINE L1 7260 7414 -230 5 680 354 235 195 0 chr17 12533091 12533240 -82739411 + Lx9 LINE L1 7381 7558 -86 6 680 636 296 127 7 chr17 12533910 12534186 -82738465 - L1MC3 LINE L1 -51 7734 7426 6 680 252 236 0 27 chr17 12534371 12534445 -82738206 - L1MC3 LINE L1 -660 7125 7054 6 680 465 274 96 25 chr17 12534629 12534786 -82737865 - ID_B1 SINE B4 -1 223 56 6 680 447 106 0 0 chr17 12534911 12534977 -82737674 + (TTCC)n Simple_repeat Simple_repeat 4 69 0 6 680 1441 64 37 0 chr17 12534992 12535179 -82737472 - B2_Mm2 SINE B2 -1 194 1 6 680 2466 78 22 0 chr17 12535283 12535603 -82737048 - ORR1A2 LTR MaLR 0 327 1 6 680 788 265 49 5 chr17 12536044 12536249 -82736402 + ID_B1 SINE B4 9 222 -2 6 680 967 144 0 7 chr17 12536483 12536630 -82736021 + B1_Mus2 SINE Alu 1 146 -1 6 680 681 255 0 27 chr17 12537631 12537780 -82734871 - RSINE1 SINE B4 -18 147 3 6 680 1134 75 0 13 chr17 12537901 12538050 -82734601 + B1_Mus1 SINE Alu 2 148 0 6 680 804 57 0 0 chr17 12538437 12538543 -82734108 + B1_Mus2 SINE Alu 2 107 -40 7 680 447 160 238 10 chr17 12538890 12538991 -82733660 - B1F SINE Alu 0 149 24 7 680 225 0 0 0 chr17 12539036 12539061 -82733590 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 7 680 562 214 39 23 chr17 12539096 12539225 -82733426 - ORR1D2 LTR MaLR -235 135 5 7 680 242 341 24 0 chr17 12540511 12540593 -82732058 + L2 LINE L2 2963 3046 -373 7 680 180 0 0 0 chr17 12541530 12541550 -82731101 + (TGGGGG)n Simple_repeat Simple_repeat 4 23 0 7 680 635 246 122 71 chr17 12542556 12542867 -82729784 + RMER10A LTR ERVL 112 438 -4 7 680 563 226 109 64 chr17 12542865 12543107 -82729544 - ORR1D1 LTR MaLR -47 337 31 7 680 797 200 7 0 chr17 12543107 12543252 -82729399 + B1_Mus2 SINE Alu 2 147 0 7 680 1331 179 9 9 chr17 12543306 12543531 -82729120 - ORR1D1 LTR MaLR -148 226 2 7 680 1312 125 0 10 chr17 12545007 12545201 -82727450 - B2_Mm2 SINE B2 -2 193 2 8 680 22 0 0 0 chr17 12545253 12545275 -82727376 + AT_rich Low_complexity Low_complexity 1 22 0 8 680 1048 116 7 0 chr17 12545288 12545434 -82727217 + B1_Mus1 SINE Alu 1 147 -1 8 680 338 107 18 0 chr17 12545436 12545492 -82727159 + (GA)n Simple_repeat Simple_repeat 2 58 0 8 680 798 226 0 35 chr17 12546881 12547051 -82725600 - RSINE1 SINE B4 -1 164 1 8 680 390 286 73 25 chr17 12547240 12547444 -82725207 + L1MA5 LINE L1 6083 6300 0 8 680 877 250 9 40 chr17 12547452 12547677 -82724974 + ID_B1 SINE B4 7 224 0 8 680 1021 268 89 33 chr17 12548060 12548314 -82724337 + MTE2b LTR MaLR 1 255 -124 8 680 213 65 0 0 chr17 12548314 12548345 -82724306 + (CCCTG)n Simple_repeat Simple_repeat 3 33 0 8 680 1021 268 89 33 chr17 12548345 12548449 -82724202 + MTE2b LTR MaLR 256 379 0 8 680 3323 46 2 2 chr17 12548700 12549096 -82723555 + MTA_Mm LTR MaLR 1 396 0 8 680 29 0 0 0 chr17 12551006 12551035 -82721616 + GC_rich Low_complexity Low_complexity 1 29 0 9 680 198 0 0 0 chr17 12551231 12551253 -82721398 + (TAAAAA)n Simple_repeat Simple_repeat 4 25 0 9 680 215 214 0 0 chr17 12552037 12552079 -82720572 + CT-rich Low_complexity Low_complexity 2 43 0 9 680 648 298 35 10 chr17 12552291 12552491 -82720160 - ID_B1 SINE B4 -17 207 3 9 680 22 56 0 0 chr17 12552513 12552549 -82720102 + AT_rich Low_complexity Low_complexity 1 36 0 9 680 297 0 0 0 chr17 12553281 12553314 -82719337 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 9 680 615 27 0 0 chr17 12553389 12553462 -82719189 + (TC)n Simple_repeat Simple_repeat 1 73 0 9 680 1696 213 98 0 chr17 12553897 12554263 -82718388 + MTD LTR MaLR 1 402 -17 9 680 1051 31 8 0 chr17 12554263 12554390 -82718261 - MTA_Mm LTR MaLR 0 396 269 9 680 441 0 19 0 chr17 12554388 12554441 -82718210 - MTB_Mm LTR MaLR -353 54 1 9 680 299 316 57 66 chr17 12555389 12555511 -82717140 + ORR1E LTR MaLR 77 197 -162 1 680 394 118 91 0 chr17 12555518 12555628 -82717023 + (TCTCTG)n Simple_repeat Simple_repeat 2 121 0 1 680 528 16 0 0 chr17 12555685 12555746 -82716905 + (TTCC)n Simple_repeat Simple_repeat 2 62 0 1 680 267 275 86 21 chr17 12555774 12555867 -82716784 + ORR1E LTR MaLR 278 376 -3 1 680 743 294 37 61 chr17 12556181 12556269 -82716382 - B4A SINE B4 -4 288 212 1 680 2432 92 3 0 chr17 12556269 12556595 -82716056 - ORR1A2 LTR MaLR 0 327 1 1 680 743 294 37 61 chr17 12556595 12556800 -82715851 - B4A SINE B4 -81 211 2 1 680 348 314 201 0 chr17 12557020 12557214 -82715437 + Tigger5 DNA MER2_type 4 236 -2170 1 680 240 143 0 0 chr17 12557595 12557651 -82715000 + (T)n Simple_repeat Simple_repeat 1 56 0 1 680 258 156 0 0 chr17 12558148 12558193 -82714458 + CT-rich Low_complexity Low_complexity 1 45 0 1 680 662 244 20 64 chr17 12558193 12558410 -82714241 - B3A SINE B2 0 216 13 1 680 279 170 64 146 chr17 12558404 12558428 -82714223 - CYRA11_Mm Unknown Y-chromosome -352 265 193 1 680 383 120 76 51 chr17 12558428 12558507 -82714144 + URR1B DNA MER1_type 145 225 0 1 680 231 293 0 0 chr17 12558532 12558607 -82714044 - L1M3 LINE L1 -3591 2549 2475 1 680 22 0 0 0 chr17 12558607 12558629 -82714022 + AT_rich Low_complexity Low_complexity 1 22 0 1 680 779 262 64 5 chr17 12558659 12558862 -82713789 - B3 SINE B2 0 216 2 1 680 264 59 0 0 chr17 12558958 12558992 -82713659 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 680 21 0 0 0 chr17 12559015 12559036 -82713615 + AT_rich Low_complexity Low_complexity 1 21 0 1 680 433 306 76 22 chr17 12559059 12559260 -82713391 + L1M3 LINE L1 2377 2584 -3556 1 680 1076 138 128 35 chr17 12559260 12559463 -82713188 - URR1A DNA MER1_type 0 226 5 1 680 433 306 76 22 chr17 12559463 12559616 -82713035 + L1M3 LINE L1 2585 2749 -3391 1 680 1237 41 7 0 chr17 12559658 12559804 -82712847 - B1_Mus1 SINE Alu -1 147 1 1 680 271 236 180 40 chr17 12559806 12559956 -82712695 + L1M3 LINE L1 2740 2910 -3233 1 680 247 311 45 36 chr17 12559956 12560066 -82712585 + ID_B1 SINE B4 73 183 -41 1 680 287 291 72 26 chr17 12560912 12561064 -82711587 + RMER15 LTR ERVL 347 505 -70 1 680 30 0 0 0 chr17 12561200 12561230 -82711421 + AT_rich Low_complexity Low_complexity 1 30 0 1 680 350 226 49 117 chr17 12561338 12561501 -82711150 + L1MA9 LINE L1 6120 6280 -20 1 680 992 196 21 21 chr17 12561627 12561820 -82710831 + B3A SINE B2 1 193 -5 1 680 1081 97 32 0 chr17 12561891 12562046 -82710605 - ORR1A2 LTR MaLR -51 276 117 1 680 789 282 93 101 chr17 12562426 12562844 -82709807 - MTD LTR MaLR 0 419 5 1 680 1081 29 0 29 chr17 12563499 12563639 -82709012 + B1_Mus2 SINE Alu 9 144 -3 1 680 2738 103 44 49 chr17 12563652 12564102 -82708549 + Lx2B LINE L1 6553 7000 0 1 680 265 126 61 0 chr17 12564211 12564275 -82708376 - Lx2 LINE L1 -1152 5857 5787 1 680 261 0 0 0 chr17 12564328 12564357 -82708294 + (A)n Simple_repeat Simple_repeat 1 29 0 1 680 295 304 39 52 chr17 12565255 12565457 -82707194 + MIR SINE MIR 2 204 -64 1 680 198 0 0 0 chr17 12565780 12565802 -82706849 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 680 795 220 0 0 chr17 12565807 12565948 -82706703 - B1_Mur1 SINE Alu -7 142 2 1 680 180 0 0 0 chr17 12566633 12566653 -82705998 + (T)n Simple_repeat Simple_repeat 1 20 0 1 680 495 0 0 0 chr17 12566993 12567048 -82705603 + (TC)n Simple_repeat Simple_repeat 1 55 0 1 680 369 0 0 0 chr17 12567050 12567091 -82705560 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 680 375 304 79 37 chr17 12567184 12567348 -82705303 - B4A SINE B4 -120 172 2 1 680 1786 155 126 12 chr17 12567568 12567902 -82704749 - MTD LTR MaLR -6 413 48 1 680 300 253 75 21 chr17 12568289 12568382 -82704269 - RMER15 LTR ERVL -73 502 405 1 680 547 232 16 31 chr17 12568882 12569011 -82703640 - ORR1E LTR MaLR -228 131 5 1 680 453 243 27 1 chr17 12570043 12570161 -82702490 + PB1D7 SINE Alu 15 149 0 1 680 634 227 8 0 chr17 12570279 12570529 -82702122 + (TA)n Simple_repeat Simple_repeat 1 252 0 1 680 743 250 54 25 chr17 12570531 12570734 -82701917 - B3A SINE B2 -13 203 2 1 680 324 250 0 0 chr17 12571849 12571913 -82700738 + ID4 SINE ID 7 70 -13 1 680 423 0 0 0 chr17 12572155 12572202 -82700449 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 680 650 252 29 0 chr17 12572431 12572570 -82700081 - B1_Mur1 SINE Alu -5 144 2 1 680 378 0 0 0 chr17 12572596 12572638 -82700013 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 680 341 225 28 0 chr17 12573652 12573723 -82698928 + B1F1 SINE Alu 8 80 -69 1 680 518 0 0 16 chr17 12573740 12573803 -82698848 + (CAA)n Simple_repeat Simple_repeat 1 62 0 1 680 1168 75 0 0 chr17 12573867 12574014 -82698637 - B1_Mm SINE Alu 0 147 1 1 680 1635 138 57 77 chr17 12574139 12574503 -82698148 + Lx LINE L1 6320 6780 -278 1 680 510 17 0 0 chr17 12574809 12574868 -82697783 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 680 311 312 56 106 chr17 12575147 12575308 -82697343 + RSINE1 SINE B4 13 165 0 1 680 31 58 0 0 chr17 12575309 12575361 -82697290 + AT_rich Low_complexity Low_complexity 1 52 0 1 680 962 276 47 4 chr17 12575475 12575733 -82696918 + B4A SINE B4 1 269 -23 1 680 387 0 0 0 chr17 12575733 12575776 -82696875 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 680 296 295 20 50 chr17 12576297 12576397 -82696254 - MLT1A1 LTR MaLR -12 396 300 1 680 498 263 120 0 chr17 12576842 12576975 -82695676 + B1F1 SINE Alu 1 149 0 1 680 219 220 0 0 chr17 12576976 12577026 -82695625 + GA-rich Low_complexity Low_complexity 2 51 0 1 680 411 272 0 0 chr17 12578809 12578901 -82693750 + PB1D10 SINE Alu 21 112 -5 1 680 410 286 87 15 chr17 12578911 12579106 -82693545 - L1MA6 LINE L1 -22 6278 6070 1 680 771 302 24 14 chr17 12579654 12579862 -82692789 + B4A SINE B4 1 210 -82 1 680 753 209 0 26 chr17 12580006 12580158 -82692493 + B1_Mur1 SINE Alu 2 149 0 1 680 261 326 167 67 chr17 12580162 12580461 -82692190 - Tigger13a DNA MER2_type -442 329 1 1 680 698 234 107 122 chr17 12580822 12581207 -82691444 - MTE2a LTR MaLR 0 379 1 1 680 1037 228 34 114 chr17 12581713 12582125 -82690526 - MTE2a LTR MaLR 0 379 1 1 681 192 40 0 0 chr17 12584170 12584195 -82688456 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 1 681 417 166 40 28 chr17 12585750 12585837 -82686814 - B2_Mm2 SINE B2 -111 87 1 1 681 1200 111 0 0 chr17 12586645 12586825 -82685826 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1 681 804 286 30 44 chr17 12586952 12587033 -82685618 + B4 SINE B4 1 81 -211 1 681 522 0 0 0 chr17 12587033 12587091 -82685560 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 681 804 286 30 44 chr17 12587091 12587305 -82685346 + B4 SINE B4 82 291 -1 1 681 322 298 26 6 chr17 12587899 12588078 -82684573 - L1MEb LINE L1 -3543 2778 2602 1 681 296 214 214 0 chr17 12588807 12588896 -82683755 + MER5A DNA MER1_type 7 114 -75 1 681 228 182 0 0 chr17 12588979 12589023 -82683628 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 681 1003 148 22 28 chr17 12589023 12589203 -82683448 - B2_Mm2 SINE B2 -15 180 2 1 681 348 281 88 59 chr17 12589865 12590103 -82682548 - L1MEb LINE L1 -3605 2716 2472 1 681 342 321 22 35 chr17 12590180 12590393 -82682258 - L1MEb LINE L1 -5110 1201 984 1 681 503 70 0 14 chr17 12590789 12590862 -82681789 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 681 407 133 20 39 chr17 12591683 12591785 -82680866 + GA-rich Low_complexity Low_complexity 2 101 0 1 681 326 306 51 64 chr17 12591786 12591943 -82680708 + HAL1-3A_ME LINE L1 2284 2438 -420 1 681 391 332 130 17 chr17 12592505 12592735 -82679916 + L1M5 LINE L1 5018 5273 -873 1 681 323 315 57 66 chr17 12592746 12592957 -82679694 + L1M5 LINE L1 5309 5517 -657 1 681 621 151 9 9 chr17 12592964 12593071 -82679580 + RMER19C LTR ERVK 1 107 -504 1 681 414 0 0 0 chr17 12593126 12593172 -82679479 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 681 696 251 103 0 chr17 12593319 12593514 -82679137 + B3 SINE B2 2 216 0 1 681 370 262 42 48 chr17 12593545 12593706 -82678945 + L1M5 LINE L1 5529 5689 -475 1 681 1168 76 0 0 chr17 12593706 12593850 -82678801 - B1_Mm SINE Alu -3 144 1 1 681 428 261 41 32 chr17 12593876 12593999 -82678652 + RSINE1 SINE B4 1 124 -41 1 681 364 238 171 38 chr17 12594009 12594114 -82678537 - B1_Mur1 SINE Alu -28 121 3 1 681 267 260 88 20 chr17 12594178 12594280 -82678371 + L1M5 LINE L1 5691 5799 -365 1 681 587 259 80 101 chr17 12594516 12594881 -82677770 - ORR1E LTR MaLR -2 357 1 1 681 22 80 0 0 chr17 12595698 12595748 -82676903 + AT_rich Low_complexity Low_complexity 1 50 0 1 681 1385 131 17 35 chr17 12596561 12596791 -82675860 + URR1A DNA MER1_type 1 226 0 1 681 492 348 56 52 chr17 12597307 12597613 -82675038 - MER21B LTR ERV1 -521 342 36 1 681 806 282 79 103 chr17 12598505 12598549 -82674102 - ORR1E LTR MaLR 0 370 344 1 681 330 26 0 0 chr17 12598549 12598588 -82674063 + (CTG)n Simple_repeat Simple_repeat 3 41 0 1 681 1052 278 51 48 chr17 12598588 12598922 -82673729 - ORR1E LTR MaLR -27 343 1 1 681 432 55 0 0 chr17 12598955 12599010 -82673641 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 681 1853 260 95 22 chr17 12599898 12600437 -82672214 - MTD-int LTR MaLR -677 581 4 1 681 1448 224 118 8 chr17 12600442 12600816 -82671835 - MTD LTR MaLR -2 417 3 1 681 196 292 90 45 chr17 12601020 12601131 -82671520 - L2c LINE L2 -15 3372 3257 1 681 216 67 0 0 chr17 12601206 12601236 -82671415 + (CAGGG)n Simple_repeat Simple_repeat 5 34 0 1 681 242 217 117 0 chr17 12601444 12601504 -82671147 + RMER30 DNA MER1_type 133 199 -3 1 681 889 168 108 0 chr17 12602753 12602920 -82669731 - B3 SINE B2 0 216 32 1 681 1373 84 5 25 chr17 12602920 12603116 -82669535 - B2_Mm2 SINE B2 -1 194 3 1 681 300 200 33 16 chr17 12603879 12604001 -82668650 + CT-rich Low_complexity Low_complexity 2 125 0 1 681 492 259 43 93 chr17 12604937 12604954 -82667697 + B4 SINE B4 70 78 -214 1 681 907 177 7 0 chr17 12604954 12605101 -82667550 + B1_Mur2 SINE Alu 2 149 0 2 681 625 302 45 2 chr17 12605145 12605321 -82667330 + B3A SINE B2 2 188 -28 2 681 1131 272 48 19 chr17 12606508 12606778 -82665873 + B4A SINE B4 9 286 -6 2 681 405 0 0 0 chr17 12607660 12607705 -82664946 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 681 182 246 69 17 chr17 12607903 12607961 -82664690 - MIRb SINE MIR -91 177 117 2 681 250 185 241 0 chr17 12608592 12608646 -82664005 + MTEa LTR MaLR 6 72 -307 2 681 379 234 63 36 chr17 12608899 12609010 -82663641 + HAL1-2a_MD LINE L1 2396 2509 -515 2 681 248 70 23 0 chr17 12609729 12609772 -82662879 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 2 681 27 0 0 0 chr17 12609907 12609934 -82662717 + AT_rich Low_complexity Low_complexity 1 27 0 2 681 234 376 0 0 chr17 12610175 12610260 -82662391 + MIR SINE MIR 113 197 -65 2 681 719 245 40 0 chr17 12610526 12610677 -82661974 + B4 SINE B4 2 158 -134 2 681 441 0 0 0 chr17 12610702 12610751 -82661900 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 681 1018 198 18 52 chr17 12610863 12611092 -82661559 + B4 SINE B4 60 280 -12 2 681 189 107 0 0 chr17 12613321 12613349 -82659302 + (A)n Simple_repeat Simple_repeat 1 28 0 2 681 1088 155 55 32 chr17 12614425 12614645 -82658006 + URR1A DNA MER1_type 1 225 -1 2 681 233 291 86 7 chr17 12614898 12614979 -82657672 + MIRc SINE MIR 143 222 -46 2 681 1250 85 62 6 chr17 12615079 12615256 -82657395 + B2_Mm2 SINE B2 2 188 -7 2 681 1026 92 0 7 chr17 12615542 12615685 -82656966 - B2_Mm2 SINE B2 -14 181 40 2 681 192 77 0 0 chr17 12615916 12615942 -82656709 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 2 681 288 296 122 40 chr17 12617481 12617629 -82655022 - MER63B DNA AcHobo -4 432 273 2 681 918 280 46 8 chr17 12618150 12618388 -82654263 + B4 SINE B4 42 288 -4 2 681 1919 204 83 7 chr17 12618857 12619184 -82653467 + RLTR20D LTR ERVK 118 462 -106 2 681 306 0 0 0 chr17 12619184 12619218 -82653433 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 681 1919 204 83 7 chr17 12619218 12619309 -82653342 + RLTR20D LTR ERVK 463 567 -1 2 681 432 0 0 0 chr17 12619428 12619476 -82653175 + (GA)n Simple_repeat Simple_repeat 1 48 0 2 681 183 80 0 0 chr17 12620274 12620299 -82652352 + (A)n Simple_repeat Simple_repeat 1 25 0 2 681 558 211 122 0 chr17 12620466 12620589 -82652062 + B1_Mur3 SINE Alu 1 138 -11 2 681 612 0 0 0 chr17 12620589 12620657 -82651994 + (CAAAC)n Simple_repeat Simple_repeat 2 69 0 2 681 296 288 25 0 chr17 12620853 12620933 -82651718 - ID4 SINE ID 0 83 2 2 681 333 222 56 0 chr17 12620957 12621029 -82651622 - PB1D10 SINE Alu -35 82 7 2 681 194 143 20 0 chr17 12621739 12621788 -82650863 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 681 309 68 0 0 chr17 12621964 12622008 -82650643 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 681 282 125 0 0 chr17 12622176 12622224 -82650427 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 681 370 247 0 0 chr17 12622224 12622297 -82650354 + ID_B1 SINE B4 132 204 -20 2 681 442 185 30 8 chr17 12622306 12622437 -82650214 + CT-rich Low_complexity Low_complexity 2 135 0 2 681 22 0 0 0 chr17 12622717 12622739 -82649912 + AT_rich Low_complexity Low_complexity 1 22 0 2 681 625 280 33 6 chr17 12623188 12623371 -82649280 + B4 SINE B4 43 230 -62 2 681 207 0 0 0 chr17 12623432 12623455 -82649196 + (CATA)n Simple_repeat Simple_repeat 4 26 0 2 681 665 97 0 10 chr17 12623463 12623567 -82649084 + (GGGA)n Simple_repeat Simple_repeat 3 105 0 2 681 225 154 0 0 chr17 12624262 12624301 -82648350 + (TCTCTG)n Simple_repeat Simple_repeat 2 40 0 2 681 738 188 42 0 chr17 12624321 12624465 -82648186 - B3A SINE B2 -48 150 1 2 681 312 27 0 0 chr17 12625245 12625282 -82647369 + (TCC)n Simple_repeat Simple_repeat 1 37 0 2 681 1639 53 0 0 chr17 12625698 12625907 -82646744 + L1Md_F2 LINE L1 6374 6582 0 2 681 608 321 78 102 chr17 12627084 12627445 -82645206 + MTE2a LTR MaLR 1 352 -27 2 681 450 53 0 0 chr17 12628273 12628330 -82644321 + (TCTG)n Simple_repeat Simple_repeat 4 60 0 2 681 198 143 0 0 chr17 12628411 12628446 -82644205 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 681 280 347 31 24 chr17 12628856 12628983 -82643668 - MER58B DNA MER1_type -1 340 213 2 681 1097 87 0 12 chr17 12629292 12629456 -82643195 + (TTTC)n Simple_repeat Simple_repeat 3 164 0 2 681 311 239 298 127 chr17 12629456 12629614 -82643037 + B4 SINE B4 66 250 -42 2 681 1389 63 0 0 chr17 12629614 12629854 -82642797 + (CA)n Simple_repeat Simple_repeat 1 240 0 2 681 306 357 85 35 chr17 12631009 12631291 -82641360 - L1ME1 LINE L1 -1 6178 5883 2 681 414 0 0 0 chr17 12631747 12631793 -82640858 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 681 704 277 109 9 chr17 12632548 12632869 -82639782 + Lx9 LINE L1 7098 7450 -194 2 681 2070 148 78 6 chr17 12632964 12633198 -82639453 + RMER1B Other Other 677 920 -146 2 681 189 74 0 0 chr17 12633198 12633225 -82639426 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2 681 2070 148 78 6 chr17 12633225 12633350 -82639301 + RMER1B Other Other 921 1061 -5 2 681 595 321 45 11 chr17 12633483 12633748 -82638903 - Charlie5 DNA MER1_type -1 2623 2350 2 681 1172 58 0 0 chr17 12634050 12634188 -82638463 - B1_Mm SINE Alu -9 138 1 2 681 2287 68 39 0 chr17 12634723 12635032 -82637619 + ORR1A2 LTR MaLR 1 321 -6 2 681 760 235 42 116 chr17 12636039 12636280 -82636371 + MTE2a LTR MaLR 157 379 0 2 681 201 121 0 0 chr17 12637104 12637137 -82635514 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 681 754 262 135 16 chr17 12637153 12637397 -82635254 - B4A SINE B4 -19 273 1 2 681 240 247 96 0 chr17 12637547 12637620 -82635031 + B3A SINE B2 1 80 -118 2 681 375 78 0 0 chr17 12637826 12637877 -82634774 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 681 448 191 26 58 chr17 12639238 12639427 -82633224 - RMER17C LTR ERVK -133 277 95 2 681 1515 136 198 25 chr17 12640852 12641170 -82631481 + RMER4B LTR ERVK 195 567 -18 2 681 1146 88 0 0 chr17 12641388 12641536 -82631115 - B1_Mus1 SINE Alu 0 148 1 2 681 464 285 139 6 chr17 12642157 12642330 -82630321 + B3A SINE B2 3 198 0 2 681 4315 83 19 3 chr17 12643007 12643590 -82629061 + Lx3B LINE L1 6380 6971 -2 2 681 22 0 0 0 chr17 12643639 12643661 -82628990 + AT_rich Low_complexity Low_complexity 1 22 0 2 681 671 289 87 19 chr17 12646452 12646868 -82625783 + L1MC5 LINE L1 6968 7411 -550 2 681 462 257 73 47 chr17 12646869 12647061 -82625590 + RMER30 DNA MER1_type 5 201 -1 2 681 991 287 69 54 chr17 12647263 12647580 -82625071 - MTE2a LTR MaLR 0 379 58 2 681 26 0 0 0 chr17 12648034 12648060 -82624591 + AT_rich Low_complexity Low_complexity 1 26 0 2 681 873 259 36 15 chr17 12648077 12648273 -82624378 + B3 SINE B2 6 205 -11 2 681 1054 258 59 15 chr17 12648780 12649051 -82623600 + B4 SINE B4 1 283 -9 2 681 264 300 36 58 chr17 12649485 12649623 -82623028 - MLT1B LTR MaLR -75 315 181 2 681 202 262 30 15 chr17 12649809 12649875 -82622776 + GA-rich Low_complexity Low_complexity 5 71 0 2 681 380 238 20 4 chr17 12649974 12650076 -82622575 + ID4 SINE ID 8 110 -42 2 681 678 25 0 0 chr17 12650253 12650333 -82622318 + (TG)n Simple_repeat Simple_repeat 1 80 0 2 681 201 74 0 0 chr17 12652007 12652034 -82620617 + (TTG)n Simple_repeat Simple_repeat 2 28 0 2 681 232 295 40 146 chr17 12653494 12653645 -82619006 + Charlie6 DNA MER1_type 2371 2505 -995 2 681 251 273 84 77 chr17 12653651 12653806 -82618845 - L1MC1 LINE L1 -55 6453 6298 2 681 645 302 79 0 chr17 12653858 12654110 -82618541 - L1MC1 LINE L1 -566 5942 5671 2 681 1140 167 34 19 chr17 12654137 12654345 -82618306 - B3 SINE B2 0 216 6 2 681 3094 272 116 8 chr17 12654359 12655659 -82616992 - L1MC1 LINE L1 -2413 3908 2469 2 681 690 216 0 0 chr17 12655732 12655857 -82616794 + B3 SINE B2 1 125 -91 2 681 189 74 0 0 chr17 12655896 12655923 -82616728 + (TCCC)n Simple_repeat Simple_repeat 1 27 0 2 681 535 251 221 17 chr17 12655983 12656214 -82616437 - L1MC1 LINE L1 -6190 318 41 2 681 272 320 31 93 chr17 12656611 12656623 -82616028 + B4 SINE B4 79 151 -141 2 681 498 206 54 12 chr17 12656623 12656763 -82615888 + PB1D9 SINE Alu 6 149 0 2 681 416 354 44 13 chr17 12657508 12657734 -82614917 - Charlie2b DNA MER1_type -8 2774 2542 2 681 1110 30 82 0 chr17 12658169 12658304 -82614347 - B1_Mus2 SINE Alu 0 147 2 2 681 550 189 304 0 chr17 12658739 12658887 -82613764 + MT2A LTR ERVL 101 293 -240 2 681 1330 186 75 110 chr17 12659495 12659945 -82612706 + MT2A LTR ERVL 1 567 -34 2 681 296 190 8 41 chr17 12659967 12660088 -82612563 + (TA)n Simple_repeat Simple_repeat 2 118 0 2 681 317 205 0 13 chr17 12660088 12660167 -82612484 + MLT2B5 LTR ERVL 478 555 0 2 681 438 269 52 65 chr17 12660292 12660447 -82612204 - RSINE1 SINE B4 -9 156 4 2 681 351 0 0 0 chr17 12661019 12661058 -82611593 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 681 234 303 34 42 chr17 12661938 12662070 -82610581 + MLT1A0 LTR MaLR 257 450 -17 2 681 185 238 14 87 chr17 12663139 12663208 -82609443 - L4 LINE RTE -1349 680 617 2 681 228 322 111 33 chr17 12663601 12663691 -82608960 + MER5B DNA MER1_type 2 98 -80 2 681 337 235 150 29 chr17 12663740 12663880 -82608771 + MLT1C LTR MaLR 17 173 -294 2 681 847 242 95 31 chr17 12665915 12666171 -82606480 + B4 SINE B4 38 292 0 2 681 1328 218 59 91 chr17 12666691 12667065 -82605586 + MTEa LTR MaLR 18 379 0 2 681 301 214 14 41 chr17 12667094 12667167 -82605484 + RSINE1 SINE B4 3 73 -92 3 681 1439 231 95 56 chr17 12669400 12669863 -82602788 - Lx6 LINE L1 -1 7459 6979 3 681 352 164 400 43 chr17 12670088 12670228 -82602423 + B3A SINE B2 4 193 -5 3 681 221 325 86 51 chr17 12670487 12670513 -82602138 - B3A SINE B2 -1 197 17 3 681 655 269 20 27 chr17 12670513 12670662 -82601989 - RSINE1 SINE B4 0 165 18 3 681 483 313 0 13 chr17 12670882 12671031 -82601620 + B1_Mur1 SINE Alu 1 147 -2 3 681 1124 197 119 4 chr17 12671065 12671325 -82601326 + B4 SINE B4 3 292 0 3 681 483 202 0 0 chr17 12671325 12671454 -82601197 + (CA)n Simple_repeat Simple_repeat 1 129 0 3 681 363 73 0 0 chr17 12672488 12672543 -82600108 + (TCC)n Simple_repeat Simple_repeat 1 55 0 3 681 393 22 0 0 chr17 12673430 12673476 -82599175 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 3 681 389 320 163 15 chr17 12673703 12673906 -82598745 + RMER15 LTR ERVL 326 558 -17 3 681 367 259 35 44 chr17 12675167 12675280 -82597371 + MER81 DNA AcHobo 3 114 0 3 681 517 194 12 0 chr17 12676238 12676408 -82596243 + (CA)n Simple_repeat Simple_repeat 2 173 0 3 681 204 97 0 0 chr17 12676431 12676462 -82596189 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 681 765 315 19 0 chr17 12677272 12677485 -82595166 + B4A SINE B4 1 217 -75 3 681 302 232 147 0 chr17 12677942 12678037 -82594614 - PB1D7 SINE Alu -11 109 1 3 681 3207 104 66 0 chr17 12679088 12679209 -82593442 - Lx2A LINE L1 -6 7002 6879 3 681 186 43 0 0 chr17 12679209 12679232 -82593419 + (CCCA)n Simple_repeat Simple_repeat 1 23 0 3 681 3207 104 66 0 chr17 12679232 12679581 -82593070 - Lx2A LINE L1 -130 6878 6502 3 681 2543 48 0 16 chr17 12679801 12680119 -82592532 - L1_Mus1 LINE L1 0 6567 6255 3 681 733 197 8 8 chr17 12680178 12680311 -82592340 + B3 SINE B2 84 216 0 3 681 930 224 5 5 chr17 12680434 12680631 -82592020 - B3 SINE B2 -19 197 1 3 681 612 260 111 48 chr17 12683065 12683336 -82589315 - B4A SINE B4 -4 288 1 3 681 212 162 27 0 chr17 12683843 12683880 -82588771 + (CACAT)n Simple_repeat Simple_repeat 2 39 0 3 681 597 342 0 0 chr17 12684077 12684235 -82588416 + B3A SINE B2 27 184 -14 3 681 216 0 0 0 chr17 12684445 12684469 -82588182 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 681 225 381 87 64 chr17 12685592 12685856 -82586795 - ORR1E LTR MaLR -2 357 88 3 681 1573 67 14 0 chr17 12685889 12686099 -82586552 - L1Md_F2 LINE L1 0 6582 6370 3 681 604 267 87 0 chr17 12686450 12686611 -82586040 - ID_B1 SINE B4 -8 216 42 3 681 357 24 0 0 chr17 12686611 12686653 -82585998 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 681 573 264 20 139 chr17 12688861 12689112 -82583539 + ID_B1 SINE B4 1 221 -3 3 681 249 319 31 31 chr17 12689306 12689403 -82583248 - MLT1J1 LTR MaLR -306 138 42 3 681 932 331 13 91 chr17 12689737 12690122 -82582529 - ORR1E LTR MaLR -4 355 1 3 681 1156 286 46 46 chr17 12690263 12690586 -82582065 + MTEa LTR MaLR 3 325 -54 3 681 188 301 86 19 chr17 12690962 12691067 -82581584 + MER5A DNA MER1_type 19 130 -59 3 681 183 240 0 91 chr17 12691314 12691369 -82581282 + L2c LINE L2 3319 3368 -19 3 681 432 323 97 65 chr17 12691861 12692324 -82580327 + L1MEd LINE L1 747 1224 -4912 3 681 205 273 0 0 chr17 12692349 12692393 -82580258 - L2b LINE L2 0 3375 3332 3 681 2672 139 12 40 chr17 12693504 12693983 -82578668 - RMER4A LTR ERVK 0 466 1 3 681 557 208 47 40 chr17 12693983 12694133 -82578518 - URR1A DNA MER1_type -8 218 68 3 681 503 269 62 39 chr17 12694211 12694389 -82578262 + B3A SINE B2 1 182 -16 3 681 246 294 44 35 chr17 12694428 12694541 -82578110 + L1MEd LINE L1 1929 2042 -4124 3 681 401 224 20 30 chr17 12694902 12695003 -82577648 + MTEa LTR MaLR 280 379 0 3 681 268 260 123 34 chr17 12695024 12695260 -82577391 + L1MEd LINE L1 2204 2472 -3694 3 681 449 361 87 54 chr17 12695341 12695730 -82576921 + L1MEd LINE L1 2562 2963 -3183 3 681 927 202 43 0 chr17 12696570 12696758 -82575893 - B3 SINE B2 -20 196 1 3 681 427 318 117 24 chr17 12701095 12701301 -82571350 + MIR SINE MIR 23 247 -15 3 681 193 167 56 0 chr17 12701864 12701900 -82570751 + L2b LINE L2 3325 3362 -13 3 681 437 205 18 14 chr17 12702396 12702616 -82570035 + (CATA)n Simple_repeat Simple_repeat 1 221 0 3 681 235 138 22 101 chr17 12702866 12702955 -82569696 + (TCCTG)n Simple_repeat Simple_repeat 3 84 0 3 681 362 178 9 45 chr17 12703022 12703134 -82569517 + C-rich Low_complexity Low_complexity 5 112 0 3 681 242 204 41 0 chr17 12703326 12703424 -82569227 + (TA)n Simple_repeat Simple_repeat 2 103 0 3 681 596 255 14 7 chr17 12703453 12703591 -82569060 + B1F2 SINE Alu 1 139 -10 3 681 353 299 109 20 chr17 12703755 12703956 -82568695 + L1M2 LINE L1 5561 5779 -512 3 681 211 167 50 0 chr17 12703981 12704041 -82568610 + (CATA)n Simple_repeat Simple_repeat 2 64 0 3 681 259 282 11 23 chr17 12704195 12704282 -82568369 + MLT1A1 LTR MaLR 18 103 -305 3 681 533 271 108 20 chr17 12705140 12705343 -82567308 + ORR1E LTR MaLR 134 354 -5 3 681 255 324 62 35 chr17 12705703 12705847 -82566804 + RMER5 LTR ERV1 44 191 -343 3 681 241 238 148 37 chr17 12705946 12706081 -82566570 + RMER5 LTR ERV1 343 492 -42 3 681 294 292 85 95 chr17 12706971 12707000 -82565651 - B2_Mm1t SINE B2 -6 187 156 3 681 230 0 0 32 chr17 12707000 12707031 -82565620 + (ATGTG)n Simple_repeat Simple_repeat 1 30 0 3 681 480 270 41 54 chr17 12707031 12707190 -82565461 - B3A SINE B2 -38 155 1 3 681 265 348 35 42 chr17 12707278 12707422 -82565229 - MIR3 SINE MIR -21 187 45 3 681 320 333 113 9 chr17 12707843 12707958 -82564693 + ID_B1 SINE B4 1 127 -97 3 681 210 111 0 0 chr17 12707955 12707982 -82564669 + B1_Mur1 SINE Alu 84 110 -39 3 681 787 182 166 0 chr17 12709220 12709407 -82563244 - URR1B DNA MER1_type -3 222 5 3 681 441 84 0 0 chr17 12709602 12709673 -82562978 + (CA)n Simple_repeat Simple_repeat 1 71 0 3 681 234 0 0 0 chr17 12711844 12711870 -82560781 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 681 891 294 150 11 chr17 12711876 12712403 -82560248 - L1MA4 LINE L1 -388 5903 5304 3 681 204 40 0 0 chr17 12712861 12712886 -82559765 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 3 681 221 75 0 24 chr17 12713034 12713075 -82559576 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 3 681 1188 61 0 13 chr17 12713075 12713224 -82559427 - B1_Mm SINE Alu 0 147 1 3 681 2095 214 82 11 chr17 12713238 12713692 -82558959 + Lx7 LINE L1 6028 6513 -1183 3 681 1950 180 3 52 chr17 12713692 12713949 -82558702 - ORR1A0 LTR MaLR 0 346 96 3 681 195 42 0 0 chr17 12713949 12713973 -82558678 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 3 85 4766 112 33 14 chr17 12713973 12714697 -82557954 - Lx LINE L1 -13 6641 5904 3 682 1950 180 3 52 chr17 12714697 12714802 -82557849 - ORR1A0 LTR MaLR -251 95 2 3 682 3703 201 98 26 chr17 12714802 12715381 -82557270 + Lx7 LINE L1 6509 7157 -539 3 682 2485 69 25 0 chr17 12715381 12715700 -82556951 - ORR1A2 LTR MaLR 0 327 1 3 682 3703 201 98 26 chr17 12715700 12715954 -82556697 + Lx7 LINE L1 7158 7401 -295 3 682 369 0 0 0 chr17 12716042 12716083 -82556568 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 682 1063 258 29 35 chr17 12716405 12716750 -82555901 - RLTR15 LTR ERVK -16 343 1 3 682 317 246 0 0 chr17 12717134 12717203 -82555448 + B4A SINE B4 4 72 -220 3 682 606 82 0 0 chr17 12717417 12717502 -82555149 + (TG)n Simple_repeat Simple_repeat 1 85 0 3 682 315 0 0 0 chr17 12717502 12717536 -82555115 + (GA)n Simple_repeat Simple_repeat 1 35 0 3 682 21 0 0 0 chr17 12717539 12717560 -82555091 + AT_rich Low_complexity Low_complexity 1 21 0 3 682 246 294 30 89 chr17 12717717 12717885 -82554766 + CYRA11_Mm Unknown Y-chromosome 188 345 -272 3 682 912 192 5 107 chr17 12717737 12717953 -82554698 - URR1B DNA MER1_type -31 194 1 3 682 21 0 0 0 chr17 12718279 12718300 -82554351 + AT_rich Low_complexity Low_complexity 1 21 0 3 682 897 234 33 0 chr17 12718478 12718662 -82553989 + ID_B1 SINE B4 17 206 -18 3 682 270 0 0 0 chr17 12718674 12718704 -82553947 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 3 682 793 227 7 0 chr17 12719786 12719927 -82552724 + B3A SINE B2 1 142 -56 3 682 351 0 0 0 chr17 12719951 12719990 -82552661 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 682 21 36 0 0 chr17 12719990 12720018 -82552633 + AT_rich Low_complexity Low_complexity 1 28 0 3 682 27 0 0 0 chr17 12720150 12720177 -82552474 + AT_rich Low_complexity Low_complexity 1 27 0 3 682 2559 37 0 0 chr17 12720177 12720476 -82552175 - L1_Mus1 LINE L1 -12 6555 6257 3 682 554 31 0 0 chr17 12720476 12720541 -82552110 + L1Md_F2 LINE L1 6206 6270 -312 3 682 407 318 6 8 chr17 12721134 12721241 -82551410 - PB1D10 SINE Alu -21 127 22 3 682 981 137 39 28 chr17 12721321 12721501 -82551150 + URR1A DNA MER1_type 45 226 0 3 682 340 261 58 69 chr17 12721501 12721529 -82551122 - CYRA11_Mm Unknown Y-chromosome -446 171 146 3 682 210 201 15 0 chr17 12722317 12722360 -82550291 + MIRc SINE MIR 110 156 -52 3 682 191 296 28 0 chr17 12723057 12723128 -82549523 - MIRc SINE MIR -153 115 43 3 682 1001 178 131 0 chr17 12723768 12723959 -82548692 + B3 SINE B2 1 216 0 3 682 1262 224 132 14 chr17 12724460 12724831 -82547820 - MTD LTR MaLR -4 415 1 3 682 212 234 0 21 chr17 12725274 12725322 -82547329 + C-rich Low_complexity Low_complexity 2 48 0 3 682 474 18 0 0 chr17 12725591 12725646 -82547005 + (CA)n Simple_repeat Simple_repeat 1 55 0 3 682 214 263 0 21 chr17 12725756 12725853 -82546798 + CT-rich Low_complexity Low_complexity 4 98 0 3 682 432 0 0 0 chr17 12726117 12726165 -82546486 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 682 1128 189 159 37 chr17 12726170 12726466 -82546185 - RMER20B LTR ERVK -295 332 1 3 682 1217 303 102 75 chr17 12726580 12727166 -82545485 + Tigger7 DNA MER2_type 1 602 -1889 3 682 237 100 0 0 chr17 12727578 12727618 -82545033 - B1_Mm SINE Alu 0 147 108 4 682 579 65 13 0 chr17 12727612 12727709 -82544942 + B1_Mus1 SINE Alu 38 139 -11 4 682 329 256 154 16 chr17 12727615 12727738 -82544913 + RLTR25B LTR ERVK 441 580 -448 4 682 457 253 49 112 chr17 12728013 12728270 -82544381 + L1MA9 LINE L1 5661 5898 -258 4 682 474 65 0 0 chr17 12728271 12728333 -82544318 + (GAAA)n Simple_repeat Simple_repeat 2 63 0 4 682 256 229 132 119 chr17 12728333 12728492 -82544159 + L1MA9 LINE L1 5894 6054 -258 4 682 471 253 195 59 chr17 12728904 12729160 -82543491 - B4 SINE B4 -1 291 1 4 682 477 71 0 0 chr17 12729165 12729235 -82543416 + (TG)n Simple_repeat Simple_repeat 2 71 0 4 682 324 0 0 0 chr17 12729274 12729310 -82543341 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4 682 654 226 0 21 chr17 12729310 12729450 -82543201 - B1F2 SINE Alu -11 138 2 4 682 828 92 0 0 chr17 12729689 12729808 -82542843 + (TG)n Simple_repeat Simple_repeat 2 120 0 4 682 1362 326 66 35 chr17 12729811 12730434 -82542217 - Lx8 LINE L1 -147 7326 6685 4 682 499 93 11 23 chr17 12731072 12731160 -82541491 + (GGGAGA)n Simple_repeat Simple_repeat 3 89 0 4 682 21 0 0 0 chr17 12731198 12731219 -82541432 + AT_rich Low_complexity Low_complexity 1 21 0 4 682 222 91 0 0 chr17 12731231 12731264 -82541387 + (CAG)n Simple_repeat Simple_repeat 1 33 0 4 682 459 0 0 0 chr17 12731571 12731622 -82541029 + (TTA)n Simple_repeat Simple_repeat 3 53 0 4 682 2805 220 207 2 chr17 12731622 12732667 -82539984 - Lx6 LINE L1 -21 7439 6181 4 682 2143 102 12 60 chr17 12732667 12733002 -82539649 + ORR1A2 LTR MaLR 1 319 -8 4 682 1677 226 33 37 chr17 12733015 12733475 -82539176 - Lx6 LINE L1 -1288 6172 5715 4 682 683 136 32 8 chr17 12733476 12733602 -82539049 - Lx6 LINE L1 -511 5369 5241 4 682 221 229 10 135 chr17 12734088 12734112 -82538539 - RSINE1 SINE B4 0 165 147 4 682 360 0 0 0 chr17 12734112 12734152 -82538499 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 682 824 213 103 36 chr17 12734152 12734386 -82538265 - B4 SINE B4 -8 284 44 4 682 195 100 0 0 chr17 12735115 12735145 -82537506 + (A)n Simple_repeat Simple_repeat 1 30 0 4 682 243 122 0 0 chr17 12736049 12736098 -82536553 + (T)n Simple_repeat Simple_repeat 1 49 0 4 682 977 184 143 138 chr17 12736360 12736751 -82535900 - RLTR9C LTR ERVK 0 393 1 4 682 801 222 12 36 chr17 12737054 12737222 -82535429 + RSINE1 SINE B4 2 165 0 4 682 380 148 397 43 chr17 12737506 12737647 -82535004 - B3A SINE B2 -4 194 4 4 682 201 74 0 0 chr17 12737660 12737687 -82534964 + (TTTTG)n Simple_repeat Simple_repeat 5 31 0 4 682 189 0 0 0 chr17 12737698 12737719 -82534932 + (T)n Simple_repeat Simple_repeat 1 21 0 4 682 272 232 31 21 chr17 12737950 12738007 -82534644 + T-rich Low_complexity Low_complexity 40 99 0 4 682 240 59 0 0 chr17 12738007 12738041 -82534610 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 682 272 232 31 21 chr17 12738041 12738080 -82534571 + T-rich Low_complexity Low_complexity 2 39 0 4 682 2620 92 24 3 chr17 12738088 12738459 -82534192 - L1_Mus4 LINE L1 -6 6630 6252 4 682 385 324 79 0 chr17 12738459 12738598 -82534053 + B4 SINE B4 104 253 -39 4 682 874 170 13 0 chr17 12738724 12738877 -82533774 + Lx5 LINE L1 6855 7009 -41 4 682 3866 178 83 75 chr17 12738879 12739774 -82532877 + RMER19B LTR ERVK 1 902 0 4 682 1386 300 174 17 chr17 12739775 12741003 -82531648 + L1_Mur3 LINE L1 4024 5443 -437 4 682 231 133 0 0 chr17 12741012 12741057 -82531594 + (CTAA)n Simple_repeat Simple_repeat 3 47 0 4 682 736 255 43 6 chr17 12741057 12741219 -82531432 + B3 SINE B2 1 168 -48 4 682 228 224 0 0 chr17 12741223 12741290 -82531361 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 4 682 496 266 124 67 chr17 12741358 12741765 -82530886 + L1MA8 LINE L1 5487 5938 -353 4 682 4773 141 35 3 chr17 12741796 12742545 -82530106 - Lx LINE L1 -5 6649 5877 4 682 608 144 18 0 chr17 12742596 12742707 -82529944 + G-rich Low_complexity Low_complexity 3 115 0 4 682 2651 60 26 89 chr17 12742707 12743090 -82529561 + RLTR10D LTR ERVK 1 359 0 4 682 874 93 169 62 chr17 12743090 12743250 -82529401 + IAP-d-int LTR ERVK 1 177 -6365 4 682 725 188 7 14 chr17 12743244 12743390 -82529261 + IAP-d-int LTR ERVK 347 491 -6051 4 682 2044 208 11 0 chr17 12743390 12743769 -82528882 + IAP-d-int LTR ERVK 5012 5394 -1148 4 682 1834 153 0 0 chr17 12743808 12744083 -82528568 + IAP-d-int LTR ERVK 5394 5668 -874 4 682 35766 66 4 4 chr17 12744083 12750862 -82521789 - L1Md_F2 LINE L1 -1 6581 98 4 682 6300 98 11 35 chr17 12750863 12751766 -82520885 + IAP-d-int LTR ERVK 5658 6538 -4 4 682 2500 84 29 94 chr17 12751769 12752022 -82520629 + RLTR10D LTR ERVK 1 247 -112 4 682 531 0 0 0 chr17 12752022 12752081 -82520570 + (GA)n Simple_repeat Simple_repeat 2 60 0 4 682 2500 84 29 94 chr17 12752081 12752210 -82520441 + RLTR10D LTR ERVK 248 358 -1 4 682 741 23 0 0 chr17 12752210 12752297 -82520354 + (GGAGA)n Simple_repeat Simple_repeat 2 88 0 4 682 37 23 0 0 chr17 12753409 12753453 -82519198 + AT_rich Low_complexity Low_complexity 1 44 0 4 682 533 250 58 35 chr17 12753462 12753636 -82519015 + MTE2b LTR MaLR 160 337 -42 4 682 253 287 100 8 chr17 12753642 12753772 -82518879 + L1M5 LINE L1 2745 2886 -3260 4 682 229 302 149 16 chr17 12754012 12754133 -82518518 - L2a LINE L2 -15 3411 3275 4 682 291 259 6 25 chr17 12754443 12754605 -82518046 + (TATG)n Simple_repeat Simple_repeat 4 162 0 4 682 341 308 35 0 chr17 12754613 12754756 -82517895 + (TG)n Simple_repeat Simple_repeat 2 149 0 4 682 269 245 10 0 chr17 12754771 12754873 -82517778 + (TG)n Simple_repeat Simple_repeat 2 104 0 4 682 391 306 0 0 chr17 12754879 12754987 -82517664 + (TATATG)n Simple_repeat Simple_repeat 5 112 0 4 682 291 250 0 120 chr17 12754987 12755087 -82517564 - RSINE1 SINE B4 0 165 78 4 682 252 307 45 0 chr17 12755239 12755327 -82517324 - L2a LINE L2 -697 2722 2631 4 682 633 201 323 16 chr17 12755354 12755444 -82517207 - RLTR20A1 LTR ERVK 0 578 481 4 682 342 0 0 0 chr17 12755444 12755482 -82517169 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 682 2075 116 138 6 chr17 12755482 12755843 -82516808 - RLTR20A1 LTR ERVK -98 480 1 4 682 272 241 0 0 chr17 12755844 12755898 -82516753 - L2a LINE L2 -847 2572 2519 4 682 5798 111 19 0 chr17 12756086 12756906 -82515745 + Lx LINE L1 5780 6615 -39 4 682 1190 189 43 125 chr17 12756906 12757257 -82515394 - RLTRETN_Mm LTR ERVK 0 322 1 4 682 387 146 17 8 chr17 12757257 12757345 -82515306 - ETnERV2-int LTR ERVK -24 7382 7327 4 682 346 228 368 11 chr17 12757345 12757623 -82515028 - RLTR13B1 LTR ERVK -368 534 155 4 682 8059 152 16 28 chr17 12757626 12759034 -82513617 - ETnERV-int LTR ERVK -265 3049 1660 4 682 294 88 35 59 chr17 12759146 12759231 -82513420 + (TTTG)n Simple_repeat Simple_repeat 2 84 0 4 682 11807 112 9 8 chr17 12759493 12761164 -82511487 - ETnERV-int LTR ERVK -1641 1673 2 4 682 1160 180 41 121 chr17 12761165 12761507 -82511144 - RLTRETN_Mm LTR ERVK 0 409 1 4 682 295 260 102 37 chr17 12762023 12762131 -82510520 + RLTR15 LTR ERVK 1 115 -244 4 682 385 288 95 14 chr17 12762245 12762467 -82510184 + RLTR15 LTR ERVK 120 359 0 4 682 329 345 188 0 chr17 12762798 12762963 -82509688 - MER3 DNA MER1_type -1 208 13 4 682 399 125 0 0 chr17 12763218 12763290 -82509361 + (TG)n Simple_repeat Simple_repeat 2 73 0 4 682 505 292 32 6 chr17 12763299 12763453 -82509198 - B4 SINE B4 -6 159 1 4 682 209 323 10 41 chr17 12765252 12765349 -82507302 + MIRm SINE MIR 88 181 -95 4 682 248 337 131 45 chr17 12766100 12766177 -82506474 + L2c LINE L2 3150 3228 -147 4 682 459 0 0 0 chr17 12766177 12766228 -82506423 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 682 261 337 131 45 chr17 12766228 12766349 -82506302 + L2c LINE L2 3229 3367 -20 4 682 939 272 95 3 chr17 12766696 12767043 -82505608 + MTE2b LTR MaLR 1 379 0 4 682 366 260 91 96 chr17 12767326 12767340 -82505311 - MLT1A0 LTR MaLR -54 311 299 4 682 558 0 0 0 chr17 12767340 12767402 -82505249 + (TAAAA)n Simple_repeat Simple_repeat 4 65 0 4 682 366 260 91 96 chr17 12767402 12767574 -82505077 - MLT1A0 LTR MaLR -67 298 126 4 682 300 262 0 16 chr17 12767633 12767695 -82504956 + MER47C DNA MER2_type 4 64 -33 4 682 252 59 0 0 chr17 12767824 12767858 -82504793 + (TTG)n Simple_repeat Simple_repeat 2 35 0 4 682 212 262 148 0 chr17 12767903 12767964 -82504687 - B4 SINE B4 -218 74 5 4 682 706 273 84 99 chr17 12768276 12768658 -82503993 - MLT1B LTR MaLR 0 390 15 4 682 458 303 77 31 chr17 12769082 12769276 -82503375 - MER21-int LTR ERV1 -70 4121 3919 4 682 504 86 0 0 chr17 12769286 12769356 -82503295 + (CA)n Simple_repeat Simple_repeat 1 70 0 4 682 774 195 68 40 chr17 12769356 12769532 -82503119 - B3 SINE B2 -34 182 2 4 682 321 312 91 59 chr17 12769740 12769961 -82502690 - MER21-int LTR ERV1 -377 3814 3587 4 682 3074 219 106 32 chr17 12770531 12771439 -82501212 + Lx9 LINE L1 6622 7596 -48 4 682 30 27 0 0 chr17 12771446 12771483 -82501168 + AT_rich Low_complexity Low_complexity 1 37 0 4 682 311 281 22 0 chr17 12771518 12771598 -82501053 + MER31A LTR ERV1 389 470 -15 4 682 574 275 49 24 chr17 12771598 12771762 -82500889 - MTE2b LTR MaLR 0 379 212 4 682 339 304 22 0 chr17 12771771 12771863 -82500788 + B4 SINE B4 77 170 -122 4 682 518 158 0 0 chr17 12771783 12771859 -82500792 + B1_Mus2 SINE Alu 4 79 -68 4 682 352 234 11 80 chr17 12771859 12771871 -82500780 + MT2B LTR ERVL 168 249 -352 4 682 439 305 94 29 chr17 12771918 12772178 -82500473 - MER21-int LTR ERV1 -3352 3406 3124 4 682 933 79 0 0 chr17 12772178 12772305 -82500346 + (TTTTC)n Simple_repeat Simple_repeat 1 127 0 4 682 439 305 94 29 chr17 12772305 12772321 -82500330 - MER21-int LTR ERV1 -3635 3123 3112 4 682 1111 70 14 7 chr17 12772484 12772628 -82500023 + B1_Mus2 SINE Alu 3 147 0 4 682 630 13 0 13 chr17 12772661 12772738 -82499913 + Lx5 LINE L1 5777 5852 -1198 4 682 6237 165 46 7 chr17 12772738 12773803 -82498848 + Lx5 LINE L1 5944 7050 0 4 682 674 294 54 40 chr17 12773959 12774182 -82498469 + B4 SINE B4 1 226 -66 4 682 256 322 11 11 chr17 12776090 12776184 -82496467 + GA-rich Low_complexity Low_complexity 3 96 0 4 682 410 302 0 69 chr17 12778072 12778246 -82494405 + RSINE1 SINE B4 4 165 0 4 682 939 304 35 31 chr17 12778302 12778518 -82494133 + B4 SINE B4 3 218 -74 4 682 459 0 0 0 chr17 12778518 12778569 -82494082 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 4 682 939 304 35 31 chr17 12778569 12778641 -82494010 + B4 SINE B4 219 291 -1 4 682 213 196 0 0 chr17 12778646 12778697 -82493954 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 682 22 0 0 0 chr17 12779132 12779154 -82493497 + AT_rich Low_complexity Low_complexity 1 22 0 4 682 1377 277 147 34 chr17 12780321 12780975 -82491676 - Lx9 LINE L1 0 7644 6917 4 682 597 28 0 0 chr17 12781491 12781562 -82491089 + (TC)n Simple_repeat Simple_repeat 1 71 0 4 682 654 126 20 27 chr17 12782603 12782663 -82489988 + polypurine Low_complexity Low_complexity 3 63 0 4 682 1394 45 0 6 chr17 12782663 12782842 -82489809 + (GGAA)n Simple_repeat Simple_repeat 1 178 0 4 682 654 126 20 27 chr17 12782842 12782928 -82489723 + polypurine Low_complexity Low_complexity 64 148 0 4 682 433 273 10 0 chr17 12783279 12783378 -82489273 - B4A SINE B4 -191 101 2 4 682 1386 104 64 23 chr17 12783400 12783644 -82489007 - Lx3B LINE L1 0 6976 6703 5 682 254 320 40 10 chr17 12783644 12783745 -82488906 - RMER30 DNA MER1_type -97 105 2 5 682 234 0 0 0 chr17 12784112 12784138 -82488513 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 682 231 316 52 134 chr17 12784247 12784419 -82488232 - ORR1E LTR MaLR -1 358 201 5 682 368 274 21 21 chr17 12784489 12784586 -82488065 + B4A SINE B4 1 97 -195 5 682 1101 213 0 23 chr17 12784591 12784807 -82487844 + B3 SINE B2 6 216 0 5 682 703 266 58 108 chr17 12784821 12785044 -82487607 + B4 SINE B4 81 292 0 5 682 224 216 0 13 chr17 12785048 12785066 -82487585 + (CA)n Simple_repeat Simple_repeat 1 17 0 5 682 543 31 0 0 chr17 12785066 12785131 -82487520 + (TA)n Simple_repeat Simple_repeat 1 65 0 5 682 224 216 0 13 chr17 12785131 12785187 -82487464 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 682 251 359 0 90 chr17 12785211 12785355 -82487296 - MLT1A LTR MaLR -223 151 21 5 682 1455 198 117 30 chr17 12785372 12785856 -82486795 - RLTR1 LTR ERV1 0 624 1 5 682 568 89 0 0 chr17 12785856 12785935 -82486716 - RLTR1B-int LTR ERV1 0 3299 3221 5 682 272 282 0 0 chr17 12785934 12786005 -82486646 - MMERGLN-int LTR ERV1 -62 7494 7424 5 682 9982 149 64 59 chr17 12786017 12787976 -82484675 - RLTR1B-int LTR ERV1 -97 3202 1250 5 682 495 0 0 0 chr17 12787976 12788031 -82484620 + (TC)n Simple_repeat Simple_repeat 1 55 0 5 682 9982 242 48 39 chr17 12788031 12788302 -82484349 - RLTR1B-int LTR ERV1 -2050 1249 1125 5 682 546 176 30 8 chr17 12788310 12788502 -82484149 - RLTR1B-int LTR ERV1 -2115 1184 1021 5 682 572 144 9 19 chr17 12788507 12788613 -82484038 - RLTR1B-int LTR ERV1 -2245 1054 950 5 682 1661 142 0 147 chr17 12788715 12789102 -82483549 - MMVL30-int LTR ERV1 -2293 1405 1076 5 682 1591 191 117 102 chr17 12789511 12790115 -82482536 - MMVL30-int LTR ERV1 -6933 623 1 5 682 1583 184 59 26 chr17 12790115 12790519 -82482132 - RLTR1 LTR ERV1 0 624 135 5 682 306 154 53 15 chr17 12790856 12790988 -82481663 + (TG)n Simple_repeat Simple_repeat 2 138 0 5 682 763 88 52 12 chr17 12790999 12791171 -82481480 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 682 523 128 54 12 chr17 12791182 12791348 -82481303 + (TG)n Simple_repeat Simple_repeat 2 174 0 5 682 278 87 22 0 chr17 12791367 12791413 -82481238 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 682 1092 261 97 11 chr17 12791534 12791883 -82480768 + MTE2b LTR MaLR 1 379 0 5 682 889 177 0 0 chr17 12792177 12792318 -82480333 + B1_Mus1 SINE Alu 1 141 -7 5 682 577 238 126 0 chr17 12792548 12792691 -82479960 + MTE2b LTR MaLR 25 185 -194 5 682 7729 62 2 6 chr17 12793586 12795040 -82477611 - L1Md_F2 LINE L1 -13 6569 5121 5 682 13925 75 20 7 chr17 12795042 12797669 -82474982 - L1Md_F2 LINE L1 -2851 3032 417 5 682 234 62 0 0 chr17 12797957 12797989 -82474662 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 5 682 894 235 17 0 chr17 12797993 12798172 -82474479 - B3A SINE B2 -16 182 1 5 682 393 307 78 35 chr17 12798206 12798348 -82474303 - ID_B1 SINE B4 -1 223 76 5 682 586 121 66 0 chr17 12798464 12798630 -82474021 + (CA)n Simple_repeat Simple_repeat 2 178 0 5 682 213 121 0 0 chr17 12798641 12798674 -82473977 + (CACG)n Simple_repeat Simple_repeat 2 34 0 5 682 414 0 0 0 chr17 12799336 12799382 -82473269 + (TC)n Simple_repeat Simple_repeat 2 47 0 5 682 510 61 0 0 chr17 12799383 12799449 -82473202 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 682 255 246 0 21 chr17 12800733 12800878 -82471773 + C-rich Low_complexity Low_complexity 3 144 0 5 682 856 244 47 9 chr17 12801795 12802010 -82470641 + ID_B1 SINE B4 2 224 0 5 682 518 98 12 0 chr17 12802136 12802218 -82470433 + (TG)n Simple_repeat Simple_repeat 2 84 0 5 682 466 297 12 41 chr17 12802219 12802460 -82470191 - B4A SINE B4 -23 269 1 5 682 855 239 62 0 chr17 12803120 12803329 -82469322 + RCHARR1 DNA MER1_type 535 756 -218 5 682 564 243 210 22 chr17 12803330 12803511 -82469140 + B3 SINE B2 1 215 -1 5 682 945 217 32 32 chr17 12803499 12803751 -82468900 + RCHARR1 DNA MER1_type 723 974 0 5 682 275 0 29 0 chr17 12803772 12803807 -82468844 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 5 682 195 306 41 0 chr17 12803814 12803863 -82468788 + MER5B DNA MER1_type 122 172 -6 5 682 1094 267 39 7 chr17 12804420 12804703 -82467948 + B4A SINE B4 1 292 0 5 682 21 57 0 0 chr17 12804736 12804771 -82467880 + AT_rich Low_complexity Low_complexity 1 35 0 5 682 308 187 27 0 chr17 12804788 12804849 -82467802 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 5 682 531 82 0 0 chr17 12804849 12804922 -82467729 + (TG)n Simple_repeat Simple_repeat 2 74 0 5 682 308 187 27 0 chr17 12804922 12804935 -82467716 + (CATATA)n Simple_repeat Simple_repeat 5 17 0 5 682 406 35 0 65 chr17 12805744 12805806 -82466845 - B2_Mm2 SINE B2 -136 59 2 5 682 267 274 21 0 chr17 12805823 12805918 -82466733 + (TATATG)n Simple_repeat Simple_repeat 3 99 0 5 682 407 290 92 23 chr17 12806198 12806371 -82466280 + L1MC1 LINE L1 6117 6301 -32 5 682 366 23 0 0 chr17 12806430 12806473 -82466178 + (TTGG)n Simple_repeat Simple_repeat 2 44 0 5 682 1130 133 6 6 chr17 12806516 12806682 -82465969 - B2_Mm2 SINE B2 -29 166 1 5 682 297 236 34 0 chr17 12806698 12806787 -82465864 + (TA)n Simple_repeat Simple_repeat 2 93 0 5 682 381 75 0 0 chr17 12806890 12806943 -82465708 + (TATG)n Simple_repeat Simple_repeat 4 56 0 5 682 669 245 26 32 chr17 12806945 12807101 -82465550 - B3A SINE B2 -43 155 1 5 682 551 289 169 43 chr17 12807129 12807384 -82465267 + B4A SINE B4 5 291 -1 5 682 248 247 52 80 chr17 12809494 12809745 -82462906 + RMER17A LTR ERVK 170 413 -338 5 682 225 330 61 20 chr17 12809952 12810051 -82462600 + B4A SINE B4 53 155 -137 5 682 717 238 74 140 chr17 12810053 12810459 -82462192 - MTE2a LTR MaLR 0 379 1 5 682 251 291 132 50 chr17 12810612 12810771 -82461880 - MIR SINE MIR -29 239 68 5 682 321 152 13 113 chr17 12811132 12811210 -82461441 - BC1_Mm scRNA scRNA -72 80 10 5 682 1402 209 126 30 chr17 12811249 12811267 -82461384 - MTD LTR MaLR -14 405 392 5 682 509 0 16 0 chr17 12811267 12811328 -82461323 + (TAAAA)n Simple_repeat Simple_repeat 4 65 0 5 682 1402 209 126 30 chr17 12811328 12811674 -82460977 - MTD LTR MaLR -28 391 6 5 682 814 183 172 0 chr17 12811675 12811855 -82460796 + B3 SINE B2 1 211 -5 5 682 21 0 0 0 chr17 12811857 12811878 -82460773 + AT_rich Low_complexity Low_complexity 1 21 0 5 682 380 352 0 19 chr17 12811883 12811990 -82460661 - PB1D10 SINE Alu -12 105 1 5 682 262 405 17 8 chr17 12811990 12812029 -82460622 - ID SINE ID -145 79 40 5 682 321 26 0 0 chr17 12812107 12812145 -82460506 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 682 340 198 180 34 chr17 12812157 12812246 -82460405 - RSINE1 SINE B4 -61 104 3 5 682 312 119 0 0 chr17 12812984 12813043 -82459608 + (CAAAAA)n Simple_repeat Simple_repeat 2 60 0 5 682 922 180 0 0 chr17 12813208 12813358 -82459293 + B1_Mur4 SINE Alu 1 150 0 5 682 429 319 11 27 chr17 12813668 12813852 -82458799 + L1MC4a LINE L1 5718 5898 -1984 5 682 318 345 84 22 chr17 12814078 12814256 -82458395 + MER102c DNA MER1_type 134 322 -9 5 682 297 317 180 0 chr17 12814853 12815014 -82457637 - MIR SINE MIR -39 223 34 5 682 438 367 0 0 chr17 12815251 12815431 -82457220 + (CTG)n Simple_repeat Simple_repeat 1 180 0 5 682 219 402 0 12 chr17 12815363 12815534 -82457117 + (TTG)n Simple_repeat Simple_repeat 2 170 0 5 682 318 365 0 0 chr17 12815535 12815893 -82456758 + (CTG)n Simple_repeat Simple_repeat 1 358 0 5 682 349 284 0 124 chr17 12815896 12816057 -82456594 - HAL1-2a_MD LINE L1 -519 2505 2365 5 682 222 389 0 14 chr17 12816086 12816227 -82456424 + (CTG)n Simple_repeat Simple_repeat 3 141 0 5 682 270 315 0 0 chr17 12816227 12816405 -82456246 + (TTG)n Simple_repeat Simple_repeat 3 180 0 5 682 2289 127 19 81 chr17 12816476 12816895 -82455756 + RLTR9C LTR ERVK 1 393 0 5 682 344 296 35 28 chr17 12816898 12817093 -82455558 - HAL1-2a_MD LINE L1 -517 2507 2365 5 682 207 320 0 0 chr17 12817170 12817298 -82455353 + (CTG)n Simple_repeat Simple_repeat 2 129 0 5 682 327 323 38 25 chr17 12817302 12817461 -82455190 - HAL1-2a_MD LINE L1 -521 2503 2343 5 682 339 348 31 0 chr17 12817477 12817638 -82455013 - HAL1-2a_MD LINE L1 -512 2512 2347 5 682 282 258 0 0 chr17 12817653 12817742 -82454909 + (CTG)n Simple_repeat Simple_repeat 2 90 0 5 682 312 305 0 72 chr17 12817750 12817902 -82454749 - HAL1-2a_MD LINE L1 -519 2505 2365 5 682 413 272 0 16 chr17 12817953 12818136 -82454515 + (TTG)n Simple_repeat Simple_repeat 1 180 0 5 682 207 307 0 0 chr17 12818112 12818226 -82454425 + (CTG)n Simple_repeat Simple_repeat 1 114 0 5 682 403 309 35 6 chr17 12818230 12818399 -82454252 - HAL1-2a_MD LINE L1 -519 2505 2332 5 682 291 308 0 0 chr17 12818428 12818571 -82454080 + (CTG)n Simple_repeat Simple_repeat 2 144 0 5 682 362 301 40 27 chr17 12818584 12818734 -82453917 - HAL1-2a_MD LINE L1 -511 2513 2362 5 682 552 267 0 0 chr17 12818794 12818974 -82453677 + (TTG)n Simple_repeat Simple_repeat 1 180 0 5 682 306 343 21 14 chr17 12818994 12819139 -82453512 - HAL1-2a_MD LINE L1 -520 2504 2359 5 682 228 314 0 0 chr17 12819152 12819327 -82453324 + (TTG)n Simple_repeat Simple_repeat 2 176 0 5 682 381 302 0 0 chr17 12819344 12819506 -82453145 + (TTG)n Simple_repeat Simple_repeat 2 163 0 5 682 209 325 0 48 chr17 12819507 12819591 -82453060 + (CTG)n Simple_repeat Simple_repeat 2 81 0 5 682 346 313 0 51 chr17 12819593 12819751 -82452900 - HAL1-2a_MD LINE L1 -519 2505 2356 5 682 189 287 0 0 chr17 12819778 12819886 -82452765 + (CTG)n Simple_repeat Simple_repeat 1 108 0 5 682 400 392 0 0 chr17 12819971 12820147 -82452504 + (CTG)n Simple_repeat Simple_repeat 2 177 0 5 682 26 0 0 0 chr17 12821362 12821388 -82451263 + AT_rich Low_complexity Low_complexity 1 26 0 5 682 764 265 40 53 chr17 12821740 12821967 -82450684 + B4 SINE B4 2 225 -67 5 682 557 237 0 13 chr17 12821967 12822121 -82450530 + GA-rich Low_complexity Low_complexity 2 153 0 5 682 782 228 24 52 chr17 12822134 12822347 -82450304 + B3 SINE B2 3 209 -7 5 682 318 292 151 14 chr17 12822363 12822502 -82450149 + L1M5 LINE L1 5348 5505 -619 5 682 378 287 43 23 chr17 12822901 12823075 -82449576 - MTE2a LTR MaLR 0 379 195 5 682 186 43 0 0 chr17 12824277 12824300 -82448351 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5 682 435 271 123 0 chr17 12824300 12824422 -82448229 - ID_B1 SINE B4 -26 198 62 5 682 21 0 0 0 chr17 12825556 12825577 -82447074 + AT_rich Low_complexity Low_complexity 1 21 0 5 682 263 161 18 0 chr17 12825631 12825687 -82446964 + GA-rich Low_complexity Low_complexity 3 59 0 5 682 302 287 130 20 chr17 12825692 12825838 -82446813 + HAL1-3A_ME LINE L1 2284 2445 -413 6 682 207 0 0 0 chr17 12826556 12826579 -82446072 + (T)n Simple_repeat Simple_repeat 1 23 0 6 682 1034 39 0 16 chr17 12826579 12826708 -82445943 - B1_Mus2 SINE Alu 0 147 21 6 682 425 189 9 112 chr17 12826616 12826723 -82445928 - MT2B LTR ERVL -337 264 169 6 682 285 263 135 10 chr17 12827573 12827669 -82444982 + B4A SINE B4 2 109 -183 6 682 687 156 0 0 chr17 12828237 12828359 -82444292 + CT-rich Low_complexity Low_complexity 1 122 0 6 682 498 33 0 0 chr17 12828351 12828411 -82444240 + (TC)n Simple_repeat Simple_repeat 1 60 0 6 682 195 184 0 0 chr17 12828414 12828452 -82444199 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 682 500 241 43 7 chr17 12828485 12828623 -82444028 - ORR1D1 LTR MaLR -231 143 1 6 682 288 0 0 0 chr17 12828755 12828787 -82443864 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 6 682 227 271 119 0 chr17 12829628 12829779 -82442872 + (CAGCC)n Simple_repeat Simple_repeat 3 171 0 6 682 204 270 126 0 chr17 12830016 12830175 -82442476 + (CAGCC)n Simple_repeat Simple_repeat 1 179 0 6 682 203 354 0 38 chr17 12830150 12830335 -82442316 + C-rich Low_complexity Low_complexity 3 180 0 6 682 198 333 25 13 chr17 12832374 12832453 -82440198 + L2a LINE L2 3307 3386 -40 6 682 451 229 181 44 chr17 12832543 12832703 -82439948 + B3A SINE B2 1 182 -16 6 682 6253 126 16 12 chr17 12832900 12833847 -82438804 - Lx LINE L1 0 6654 5715 6 682 994 264 64 29 chr17 12834514 12834732 -82437919 + B4 SINE B4 2 227 -65 6 682 651 300 86 40 chr17 12834732 12835010 -82437641 + B4A SINE B4 1 291 -1 6 682 994 264 64 29 chr17 12835010 12835072 -82437579 + B4 SINE B4 228 292 0 6 682 266 0 29 0 chr17 12835077 12835111 -82437540 + (CCA)n Simple_repeat Simple_repeat 3 37 0 6 682 7151 90 28 43 chr17 12835587 12836636 -82436015 + RLTR13D4 LTR ERVK 1 1033 0 6 682 534 286 134 50 chr17 12836636 12836875 -82435776 + MER2 DNA MER2_type 87 345 0 6 682 773 269 21 11 chr17 12836980 12837168 -82435483 + B3A SINE B2 1 190 -8 6 682 1287 256 85 28 chr17 12837269 12837429 -82435222 - MTE2b LTR MaLR -5 374 207 6 682 2332 97 12 0 chr17 12837429 12837750 -82434901 + ORR1A2 LTR MaLR 1 325 -2 6 682 1287 256 85 28 chr17 12837750 12837943 -82434708 - MTE2b LTR MaLR -173 206 1 6 682 225 0 0 0 chr17 12838583 12838608 -82434043 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 682 4464 178 68 24 chr17 12838899 12839824 -82432827 + Lx5 LINE L1 6085 7050 0 6 682 960 224 29 34 chr17 12839846 12840054 -82432597 - B3 SINE B2 -9 207 1 6 682 774 254 86 19 chr17 12840084 12840293 -82432358 + ID_B1 SINE B4 2 224 0 6 682 296 29 0 0 chr17 12840385 12840420 -82432231 - U2 snRNA snRNA -153 35 1 6 682 954 153 182 10 chr17 12841429 12841621 -82431030 - URR1B DNA MER1_type 0 225 1 6 682 237 33 0 0 chr17 12841659 12841689 -82430962 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 6 682 22 0 0 0 chr17 12841961 12841983 -82430668 + AT_rich Low_complexity Low_complexity 1 22 0 6 682 340 314 32 116 chr17 12842009 12842046 -82430605 - B1F SINE Alu -7 142 111 6 682 1164 72 0 0 chr17 12842046 12842185 -82430466 + B1_Mus1 SINE Alu 2 140 -8 6 682 203 0 37 0 chr17 12842185 12842212 -82430439 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 6 682 370 18 0 66 chr17 12842213 12842274 -82430377 + (TA)n Simple_repeat Simple_repeat 2 58 0 6 682 340 314 32 116 chr17 12842274 12842388 -82430263 - B1F SINE Alu -39 110 2 6 682 779 218 6 50 chr17 12842427 12842606 -82430045 + Lx8 LINE L1 6977 7147 -326 6 682 242 255 19 84 chr17 12842703 12842810 -82429841 + Lx8 LINE L1 7374 7473 0 6 682 605 182 55 0 chr17 12843306 12843416 -82429235 + PB1D9 SINE Alu 3 118 -2 6 682 347 250 35 30 chr17 12844130 12844299 -82428352 + (TAGA)n Simple_repeat Simple_repeat 4 173 0 6 682 734 143 8 0 chr17 12844393 12844526 -82428125 + CT-rich Low_complexity Low_complexity 3 136 0 6 682 225 363 10 10 chr17 12844810 12844913 -82427738 - PB1D10 SINE Alu -12 105 3 6 683 245 342 11 112 chr17 12846156 12846232 -82426419 + ORR1E LTR MaLR 29 92 -267 6 683 1000 163 147 5 chr17 12846232 12846429 -82426222 + URR1A DNA MER1_type 2 226 0 6 683 245 342 11 112 chr17 12846429 12846530 -82426121 + ORR1E LTR MaLR 93 187 -172 6 683 518 41 14 0 chr17 12846815 12846888 -82425763 + (TCTA)n Simple_repeat Simple_repeat 2 75 0 6 683 264 118 0 121 chr17 12846933 12846991 -82425660 - B1_Mur1 SINE Alu 0 149 99 6 683 478 256 23 64 chr17 12847361 12847532 -82425119 + RSINE1 SINE B4 2 165 0 6 683 209 196 22 0 chr17 12847533 12847579 -82425072 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 683 372 22 0 0 chr17 12847581 12847626 -82425025 + (TC)n Simple_repeat Simple_repeat 1 45 0 6 683 440 209 11 11 chr17 12847626 12847805 -82424846 + (CA)n Simple_repeat Simple_repeat 1 179 0 6 683 391 232 7 138 chr17 12847975 12848120 -82424531 + MT2B LTR ERVL 133 258 -343 6 683 687 143 151 0 chr17 12848025 12848144 -82424507 + B1_Mus1 SINE Alu 11 147 -1 6 683 296 299 75 5 chr17 12848605 12848793 -82423858 + L1M3 LINE L1 5095 5295 -845 6 683 761 231 98 51 chr17 12848843 12849057 -82423594 + ORR1E LTR MaLR 118 341 -18 6 683 4200 103 24 18 chr17 12849103 12849727 -82422924 + Lx LINE L1 6027 6654 0 6 683 369 0 0 0 chr17 12851358 12851399 -82421252 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 683 253 356 44 26 chr17 12851683 12851911 -82420740 + L1M5 LINE L1 5450 5681 -481 6 683 220 274 73 65 chr17 12853003 12853138 -82419513 + MIRb SINE MIR 96 240 -28 6 683 192 350 43 21 chr17 12853635 12853775 -82418876 - MIRb SINE MIR -56 212 70 6 683 909 254 80 22 chr17 12853817 12854091 -82418560 + B4A SINE B4 2 291 -1 6 683 241 238 0 0 chr17 12854705 12854760 -82417891 - L2b LINE L2 -2 3424 3329 6 683 213 235 0 0 chr17 12855889 12855923 -82416728 - ID_B1 SINE B4 -105 119 86 6 683 789 145 0 31 chr17 12856279 12856407 -82416244 + B1_Mm SINE Alu 9 132 -15 6 683 216 0 0 0 chr17 12856409 12856433 -82416218 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 6 683 208 275 165 18 chr17 12858375 12858545 -82414106 - L2 LINE L2 -1112 2307 2113 6 683 224 328 90 46 chr17 12858712 12858923 -82413728 - MIRc SINE MIR -11 251 22 6 683 459 0 0 0 chr17 12859084 12859135 -82413516 + (TTG)n Simple_repeat Simple_repeat 1 51 0 6 683 469 116 35 0 chr17 12859261 12859347 -82413304 + C-rich Low_complexity Low_complexity 6 94 0 6 683 960 287 38 8 chr17 12860495 12860762 -82411889 + B4A SINE B4 9 283 -9 6 683 387 119 0 0 chr17 12860772 12860839 -82411812 + (CA)n Simple_repeat Simple_repeat 2 68 0 6 683 654 243 7 46 chr17 12860880 12861031 -82411620 + ID_B1 SINE B4 80 224 0 6 683 1036 131 14 52 chr17 12861194 12861404 -82411247 - Lx4B LINE L1 -249 6809 6608 6 683 1238 113 20 105 chr17 12861404 12861652 -82410999 + Lx4B LINE L1 6814 7040 -18 6 683 207 0 0 0 chr17 12861652 12861675 -82410976 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 6 683 684 296 44 68 chr17 12861710 12862271 -82410380 - RLTR18 LTR ERVK -127 385 1 6 683 210 122 49 0 chr17 12863271 12863312 -82409339 + T-rich Low_complexity Low_complexity 2 44 0 6 683 1340 45 90 6 chr17 12863314 12863492 -82409159 - B2_Mm2 SINE B2 -2 193 1 6 683 334 254 56 0 chr17 12864464 12864535 -82408116 - B4A SINE B4 -1 291 217 6 683 748 99 8 22 chr17 12864541 12864675 -82407976 + (TG)n Simple_repeat Simple_repeat 1 132 0 6 683 280 276 105 0 chr17 12864696 12864772 -82407879 - B4 SINE B4 -8 284 201 6 683 393 141 0 0 chr17 12864800 12864871 -82407780 + (TG)n Simple_repeat Simple_repeat 1 71 0 6 683 326 314 62 153 chr17 12864871 12864967 -82407684 - B4A SINE B4 0 292 183 6 683 711 220 87 0 chr17 12864967 12865117 -82407534 - RSINE1 SINE B4 0 165 3 6 683 326 314 62 153 chr17 12865117 12865340 -82407311 - B4A SINE B4 -110 182 2 6 683 39 38 0 0 chr17 12865941 12865994 -82406657 + AT_rich Low_complexity Low_complexity 1 53 0 6 683 190 156 0 30 chr17 12866021 12866087 -82406564 + (TATAA)n Simple_repeat Simple_repeat 2 65 0 6 683 537 179 10 21 chr17 12866099 12866196 -82406455 + PB1D7 SINE Alu 4 99 -21 6 683 916 267 23 18 chr17 12866395 12866652 -82405999 + ID_B1 SINE B4 1 271 -21 6 683 267 31 0 0 chr17 12867077 12867109 -82405542 + (TCCC)n Simple_repeat Simple_repeat 4 35 0 6 683 524 164 128 38 chr17 12867109 12867242 -82405409 + B1_Mur3 SINE Alu 5 149 0 6 683 211 26 0 95 chr17 12867242 12867284 -82405367 + (CAAAAA)n Simple_repeat Simple_repeat 6 43 0 6 683 264 282 83 40 chr17 12867407 12867532 -82405119 - MIRb SINE MIR -71 197 68 6 683 571 260 79 13 chr17 12867710 12867862 -82404789 + RSINE1 SINE B4 3 164 -1 6 683 195 186 0 0 chr17 12867866 12867909 -82404742 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 6 683 621 38 0 0 chr17 12868823 12868903 -82403748 + (CA)n Simple_repeat Simple_repeat 1 80 0 6 683 514 226 11 11 chr17 12868952 12869010 -82403641 + ID SINE ID 24 81 -143 6 683 330 193 361 0 chr17 12869010 12869093 -82403558 + PB1D7 SINE Alu 1 113 -7 6 683 232 305 61 0 chr17 12869300 12869382 -82403269 + MLT1E3 LTR MaLR 326 412 -212 6 683 1753 174 91 8 chr17 12869438 12869791 -82402860 - MTC-int LTR MaLR -129 1129 748 6 683 1076 206 45 30 chr17 12869796 12870061 -82402590 + ORR1E-int LTR MaLR 1087 1355 -15 6 683 1032 275 69 55 chr17 12870075 12870283 -82402368 + ORR1E LTR MaLR 4 209 -150 6 683 405 0 0 0 chr17 12870283 12870328 -82402323 + (TC)n Simple_repeat Simple_repeat 2 46 0 6 683 288 0 0 0 chr17 12870328 12870359 -82402292 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 683 1032 275 69 55 chr17 12870359 12870495 -82402156 + ORR1E LTR MaLR 210 353 -6 6 683 373 298 52 22 chr17 12871310 12871443 -82401208 + MLT1A1 LTR MaLR 1 137 -271 6 683 981 176 56 42 chr17 12871443 12871657 -82400994 - URR1B DNA MER1_type 0 225 9 7 683 282 291 43 43 chr17 12871750 12871865 -82400786 + MLT1A1 LTR MaLR 282 396 -12 6 683 2146 133 31 17 chr17 12872485 12872844 -82399807 + ORR1B1 LTR MaLR 31 394 0 7 683 283 273 123 35 chr17 12872844 12872956 -82399695 - ID_B1 SINE B4 -46 178 57 7 683 311 264 228 23 chr17 12872990 12873161 -82399490 - B4A SINE B4 -19 273 68 7 683 312 297 96 59 chr17 12874530 12874666 -82397985 + ID_B1 SINE B4 77 217 -7 7 683 180 77 0 0 chr17 12875685 12875711 -82396940 + (A)n Simple_repeat Simple_repeat 1 26 0 7 683 198 0 0 0 chr17 12876107 12876129 -82396522 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 7 683 641 250 97 73 chr17 12877357 12877616 -82395035 - B4 SINE B4 -27 265 1 7 683 310 261 153 22 chr17 12880566 12880703 -82391948 - RSINE1 SINE B4 0 165 11 7 683 263 325 0 0 chr17 12882386 12882466 -82390185 + ID4_ SINE ID 4 83 0 7 683 644 129 0 0 chr17 12887059 12887152 -82385499 - 4.5SRNA scRNA scRNA 0 94 2 7 683 180 0 0 0 chr17 12887720 12887740 -82384911 + (T)n Simple_repeat Simple_repeat 1 20 0 7 683 1550 57 5 0 chr17 12887746 12887938 -82384713 + B2_Mm1a SINE B2 1 193 0 7 683 657 272 35 30 chr17 12889425 12889622 -82383029 + B3A SINE B2 1 198 0 7 683 396 295 20 27 chr17 12889744 12889894 -82382757 + B3A SINE B2 33 181 -17 7 683 431 289 15 23 chr17 12890490 12890621 -82382030 + B1F SINE Alu 3 132 -17 7 683 1282 34 0 0 chr17 12890629 12890775 -82381876 + B1_Mm SINE Alu 2 147 0 7 683 301 326 21 21 chr17 12890780 12890874 -82381777 + L1M5 LINE L1 3081 3174 -2972 7 683 873 182 119 22 chr17 12895324 12895509 -82377142 - B3 SINE B2 0 216 14 7 683 787 232 0 0 chr17 12895945 12896083 -82376568 + RSINE1 SINE B4 6 143 -22 7 683 239 310 99 0 chr17 12896538 12896609 -82376042 - ID4_ SINE ID -4 79 2 7 683 468 252 29 36 chr17 12896619 12896759 -82375892 - B1F SINE Alu -9 140 2 7 683 315 105 0 0 chr17 12898453 12898510 -82374141 + (CA)n Simple_repeat Simple_repeat 1 57 0 7 683 471 284 134 35 chr17 12899958 12900301 -82372350 - L1MA5 LINE L1 -299 6001 5625 7 683 325 203 0 0 chr17 12900373 12900432 -82372219 - RSINE1 SINE B4 0 165 107 7 683 251 322 53 75 chr17 12900402 12900494 -82372157 - B4 SINE B4 -11 281 98 7 683 287 279 52 31 chr17 12900494 12900590 -82372061 - PB1D10 SINE Alu -7 110 13 7 683 354 98 0 0 chr17 12900730 12900781 -82371870 + (TGAA)n Simple_repeat Simple_repeat 3 53 0 7 683 258 212 15 15 chr17 12901219 12901286 -82371365 - L1M2 LINE L1 -2773 3370 3304 7 683 247 310 79 10 chr17 12901460 12901561 -82371090 + MIR SINE MIR 42 149 -113 7 683 642 194 72 0 chr17 12901716 12901855 -82370796 + B1_Mur2 SINE Alu 1 149 0 7 683 200 132 26 0 chr17 12902088 12902126 -82370525 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 7 683 909 48 159 0 chr17 12902521 12902647 -82370004 + B1_Mm SINE Alu 2 147 0 7 683 766 195 74 11 chr17 12905311 12905487 -82367164 + B2_Mm2 SINE B2 1 187 -8 7 683 236 171 33 31 chr17 12906304 12906369 -82366282 + B1F SINE Alu 12 113 -36 7 683 426 39 0 0 chr17 12906386 12906438 -82366213 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 683 514 181 94 9 chr17 12906516 12906622 -82366029 + B1F2 SINE Alu 33 147 -2 7 683 324 0 0 0 chr17 12909074 12909110 -82363541 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 683 381 314 55 55 chr17 12910412 12910577 -82362074 + ID_B1 SINE B4 2 166 -58 7 683 243 353 47 12 chr17 12910514 12910600 -82362051 + PB1D10 SINE Alu 23 111 -6 7 683 317 319 96 63 chr17 12910668 12910939 -82361712 + L1MB3 LINE L1 5903 6182 -1 7 683 354 74 0 0 chr17 12913190 12913244 -82359407 + (TG)n Simple_repeat Simple_repeat 2 55 0 7 683 447 274 31 39 chr17 12913752 12913881 -82358770 + MTEb LTR MaLR 201 328 -51 7 683 309 287 36 65 chr17 12916018 12916068 -82356583 + L1MC5 LINE L1 7802 7850 -111 7 683 1148 113 139 0 chr17 12916068 12916262 -82356389 - URR1A DNA MER1_type -3 223 3 7 683 309 287 36 65 chr17 12916262 12916349 -82356302 + L1MC5 LINE L1 7851 7935 -26 7 683 195 69 0 0 chr17 12918151 12918180 -82354471 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 683 1154 45 0 0 chr17 12919276 12919410 -82353241 + B1_Mm SINE Alu 1 134 -13 7 683 180 0 0 0 chr17 12919410 12919430 -82353221 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 7 683 351 0 0 0 chr17 12919852 12919891 -82352760 + (TG)n Simple_repeat Simple_repeat 1 39 0 7 683 494 259 151 159 chr17 12919901 12919980 -82352671 - B4A SINE B4 -18 274 215 7 683 369 43 0 0 chr17 12919980 12920027 -82352624 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 683 494 259 151 159 chr17 12920027 12920218 -82352433 - B4A SINE B4 -78 214 6 7 683 238 305 127 45 chr17 12920409 12920519 -82352132 + PB1D7 SINE Alu 1 119 -1 7 683 1137 68 0 52 chr17 12920526 12920681 -82351970 + B1_Mus1 SINE Alu 2 148 0 7 683 263 228 105 0 chr17 12920690 12920747 -82351904 + B4A SINE B4 2 64 -228 7 683 454 279 33 79 chr17 12920919 12921071 -82351580 + B4A SINE B4 148 292 0 7 683 379 279 75 87 chr17 12921113 12921274 -82351377 + RSINE1 SINE B4 5 163 -2 7 683 349 310 76 71 chr17 12921701 12921899 -82350752 + L1MB7 LINE L1 5955 6153 -31 7 683 4532 55 42 11 chr17 12921961 12922535 -82350116 + L1_Mus2 LINE L1 5975 6566 0 7 683 448 310 191 52 chr17 12923933 12924185 -82348466 + B4 SINE B4 4 290 -2 7 683 461 259 143 44 chr17 12925143 12925325 -82347326 + MLT1B LTR MaLR 191 390 0 7 683 2288 212 52 52 chr17 12925447 12926019 -82346632 + Lx5 LINE L1 6472 7043 -7 7 683 297 0 0 0 chr17 12926499 12926532 -82346119 + (CA)n Simple_repeat Simple_repeat 1 33 0 7 683 881 162 0 34 chr17 12929087 12929234 -82343417 + B1_Mur1 SINE Alu 2 143 -6 7 683 189 324 164 6 chr17 12929264 12929447 -82343204 + L2 LINE L2 1677 1888 -1531 7 683 468 242 161 15 chr17 12929710 12929840 -82342811 + RSINE1 SINE B4 11 159 -6 7 683 441 0 0 0 chr17 12929868 12929917 -82342734 + (TAA)n Simple_repeat Simple_repeat 2 50 0 7 683 207 280 167 42 chr17 12930241 12930409 -82342242 + L2 LINE L2 2656 2844 -575 7 683 547 270 7 100 chr17 12931008 12931062 -82341589 + ID_B1 SINE B4 82 126 -98 7 683 820 264 180 9 chr17 12931062 12931379 -82341272 - MTEa LTR MaLR -4 375 5 7 683 547 270 7 100 chr17 12931379 12931464 -82341187 + ID_B1 SINE B4 127 208 -16 7 683 1375 85 21 0 chr17 12931484 12931673 -82340978 + B2_Mm1t SINE B2 1 193 0 7 683 261 149 14 43 chr17 12932008 12932078 -82340573 - Lx7 LINE L1 0 7696 7629 7 683 23 0 0 0 chr17 12932252 12932275 -82340376 + AT_rich Low_complexity Low_complexity 1 23 0 7 683 2195 204 41 55 chr17 12933316 12933829 -82338822 + RLTR18B LTR ERVK 7 512 0 7 683 2106 142 103 43 chr17 12936246 12936643 -82336008 + MTC LTR MaLR 1 421 0 7 683 253 292 10 174 chr17 12939418 12939566 -82333085 + RMER5 LTR ERV1 13 138 -396 7 683 414 0 0 0 chr17 12939566 12939612 -82333039 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 683 253 292 10 174 chr17 12939612 12939670 -82332981 + RMER5 LTR ERV1 139 185 -349 7 683 327 206 165 18 chr17 12939753 12939862 -82332789 + RMER5 LTR ERV1 401 525 -9 7 683 715 213 149 27 chr17 12940635 12940823 -82331828 + B3 SINE B2 2 212 -4 7 683 403 253 41 30 chr17 12941043 12941142 -82331509 - B3A SINE B2 -96 102 2 7 683 246 226 262 10 chr17 12941260 12941363 -82331288 + B3A SINE B2 1 129 -69 7 683 856 241 59 0 chr17 12941982 12942185 -82330466 - B3 SINE B2 -1 215 1 7 683 242 301 0 14 chr17 12942229 12942303 -82330348 + YREP_Mm Unknown Unknown 240 312 -1500 7 683 718 226 14 7 chr17 12942238 12942385 -82330266 - ID_B1 SINE B4 -75 149 2 7 683 302 263 39 48 chr17 12944643 12944736 -82327915 + ID_B1 SINE B4 120 213 -11 7 683 407 265 112 15 chr17 12944736 12944870 -82327781 + B1_Mur2 SINE Alu 2 148 -1 7 683 273 266 128 0 chr17 12945647 12945741 -82326910 + PB1D9 SINE Alu 15 120 0 7 683 429 274 155 14 chr17 12946026 12946174 -82326477 + ORR1E LTR MaLR 2 170 -189 7 683 556 229 206 7 chr17 12946207 12946241 -82326410 + ID_B1 SINE B4 49 110 -114 7 683 272 266 118 50 chr17 12946241 12946360 -82326291 + PB1 SINE Alu 1 127 0 7 683 206 118 0 0 chr17 12946580 12946614 -82326037 + (A)n Simple_repeat Simple_repeat 1 34 0 7 683 568 258 45 38 chr17 12946652 12946809 -82325842 + RSINE1 SINE B4 8 165 0 7 683 1092 37 0 7 chr17 12946855 12946991 -82325660 - B1_Mus1 SINE Alu 0 148 14 7 683 270 270 70 0 chr17 12946896 12947011 -82325640 - MTEa-int LTR MaLR -755 754 632 7 683 263 277 110 85 chr17 12948355 12948626 -82324025 - MTEa LTR MaLR -14 365 89 7 683 216 182 0 0 chr17 12948795 12948839 -82323812 + C-rich Low_complexity Low_complexity 2 45 0 7 683 25 0 0 0 chr17 12949384 12949409 -82323242 + AT_rich Low_complexity Low_complexity 1 25 0 7 683 418 286 129 18 chr17 12949459 12949630 -82323021 + ID_B1 SINE B4 15 204 -20 7 683 338 256 35 2 chr17 12949907 12950001 -82322650 + B1F SINE Alu 14 112 -8 7 683 336 188 0 0 chr17 12950598 12950667 -82321984 + (TCCCG)n Simple_repeat Simple_repeat 2 70 0 7 683 299 311 18 45 chr17 12951198 12951309 -82321342 + PB1D10 SINE Alu 1 108 -9 7 683 351 44 0 0 chr17 12951316 12951361 -82321290 + (CATA)n Simple_repeat Simple_repeat 2 46 0 7 683 246 250 103 77 chr17 12951361 12951439 -82321212 + ID4_ SINE ID 3 82 -1 7 683 329 133 0 77 chr17 12952009 12952074 -82320577 + PB1D9 SINE Alu 5 64 -56 7 683 411 73 0 0 chr17 12952103 12952158 -82320493 + (CA)n Simple_repeat Simple_repeat 1 55 0 7 683 254 170 216 93 chr17 12952493 12952590 -82320061 + PB1D7 SINE Alu 5 113 -7 8 683 482 261 9 0 chr17 12953002 12953117 -82319534 + PB1D10 SINE Alu 1 116 -1 8 683 508 151 64 11 chr17 12953146 12953240 -82319411 + B1_Mur3 SINE Alu 38 136 -13 8 683 297 51 0 0 chr17 12953245 12953284 -82319367 + (CAAAA)n Simple_repeat Simple_repeat 5 43 0 8 683 313 341 110 66 chr17 12954059 12954241 -82318410 - B3A SINE B2 -4 194 5 8 683 920 176 99 40 chr17 12954450 12954494 -82318157 + B3 SINE B2 1 44 -172 8 683 1607 138 138 42 chr17 12954494 12954625 -82318026 - ORR1B2 LTR MaLR 0 367 222 8 683 267 31 0 0 chr17 12954625 12954657 -82317994 + (CAGG)n Simple_repeat Simple_repeat 4 35 0 8 683 1607 138 138 42 chr17 12954657 12954859 -82317792 - ORR1B2 LTR MaLR -146 221 2 8 683 920 176 99 40 chr17 12954859 12955015 -82317636 + B3 SINE B2 45 213 -3 8 683 1429 81 5 0 chr17 12955143 12955329 -82317322 - B2_Mm1a SINE B2 -5 188 2 8 683 328 309 57 80 chr17 12955353 12955420 -82317231 + B4A SINE B4 1 69 -223 8 683 1595 32 21 0 chr17 12955420 12955609 -82317042 - B2_Mm1a SINE B2 0 193 1 8 683 328 309 57 80 chr17 12955609 12955717 -82316934 + B4A SINE B4 70 172 -120 8 683 677 140 433 0 chr17 12956027 12956177 -82316474 + B3 SINE B2 2 216 0 8 683 419 317 12 58 chr17 12956320 12956491 -82316160 + MER20 DNA MER1_type 1 163 -56 8 683 547 244 9 0 chr17 12956532 12956647 -82316004 + ORR1D2 LTR MaLR 5 120 -250 8 683 288 0 0 0 chr17 12956883 12956915 -82315736 + (A)n Simple_repeat Simple_repeat 1 32 0 8 683 358 223 95 11 chr17 12956999 12957094 -82315557 + PB1D10 SINE Alu 9 111 -6 8 683 443 250 18 18 chr17 12957154 12957264 -82315387 + L1M5 LINE L1 5479 5588 -576 8 683 228 211 50 50 chr17 12957490 12957570 -82315081 + ID4_ SINE ID 1 80 -3 8 683 1072 46 0 0 chr17 12957625 12957756 -82314895 - B1_Mm SINE Alu -5 142 12 8 683 370 164 319 26 chr17 12957850 12957963 -82314688 - B1_Mus1 SINE Alu -4 146 1 8 683 353 224 55 46 chr17 12958783 12958897 -82313754 + PB1D10 SINE Alu 1 120 0 8 683 759 153 1 12 chr17 12960327 12960465 -82312186 + B1_Mus1 SINE Alu 1 136 -12 8 683 415 259 6 149 chr17 12960465 12960494 -82312157 + ID_B1 SINE B4 82 224 0 8 683 918 241 43 19 chr17 12960521 12960728 -82311923 + B3 SINE B2 1 212 -4 8 683 515 238 56 35 chr17 12960782 12960947 -82311704 + B3A SINE B2 44 197 -1 8 683 302 254 14 0 chr17 12960958 12961029 -82311622 + ID4 SINE ID 3 74 -9 8 683 23 0 0 0 chr17 12962194 12962217 -82310434 + GC_rich Low_complexity Low_complexity 1 23 0 8 683 412 264 11 0 chr17 12963139 12963230 -82309421 - PB1D10 SINE Alu -22 95 4 8 683 317 296 9 67 chr17 12963230 12963244 -82309407 - ID_B1 SINE B4 -48 176 78 8 683 360 269 279 20 chr17 12963312 12963509 -82309142 + B4A SINE B4 1 248 -44 8 683 675 251 174 5 chr17 12963504 12963688 -82308963 + 7SK RNA RNA 8 222 -109 8 683 1259 224 34 19 chr17 12963983 12964302 -82308349 + MTD LTR MaLR 5 348 -73 8 683 466 194 83 0 chr17 12964303 12964411 -82308240 + MTD LTR MaLR 281 397 -22 8 683 282 307 138 43 chr17 12964521 12964613 -82308038 - LTR37A LTR ERV1 -44 382 286 8 683 180 0 0 0 chr17 12964613 12964633 -82308018 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 8 683 282 307 138 43 chr17 12964633 12964822 -82307829 - LTR37A LTR ERV1 -141 285 74 8 683 328 264 67 142 chr17 12964926 12965010 -82307641 + Tigger7 DNA MER2_type 2276 2362 -129 8 683 992 148 114 21 chr17 12965010 12965203 -82307448 + B3 SINE B2 1 211 -5 8 683 328 264 67 142 chr17 12965203 12965343 -82307308 + Tigger7 DNA MER2_type 2363 2483 -8 8 683 305 197 24 73 chr17 12965434 12965516 -82307135 - ID2 SINE ID -4 79 2 8 683 521 270 102 36 chr17 12965732 12965928 -82306723 + MER58A DNA MER1_type 15 223 -1 8 683 423 234 64 0 chr17 12966048 12966142 -82306509 + ID_B1 SINE B4 106 205 -19 8 683 589 193 21 49 chr17 12966191 12966333 -82306318 + B1_Mus1 SINE Alu 11 148 0 8 683 711 285 122 37 chr17 12966394 12966747 -82305904 + MLT1C LTR MaLR 7 389 -78 8 683 406 244 0 0 chr17 12967188 12967270 -82305381 + ID4_ SINE ID 2 83 0 8 683 234 0 0 0 chr17 12967401 12967427 -82305224 + (TTTTG)n Simple_repeat Simple_repeat 4 29 0 8 683 1165 70 0 0 chr17 12967428 12967570 -82305081 - B1_Mus1 SINE Alu -6 142 1 8 683 288 0 0 0 chr17 12968373 12968405 -82304246 + (CA)n Simple_repeat Simple_repeat 2 33 0 8 683 569 229 0 8 chr17 12968405 12968528 -82304123 + B1_Mur1 SINE Alu 23 144 -5 8 683 215 61 30 0 chr17 12968528 12968561 -82304090 + (GAA)n Simple_repeat Simple_repeat 3 36 0 8 683 5275 90 22 1 chr17 12968564 12969284 -82303367 + RMER19A LTR ERVK 1 735 -2 8 683 502 274 13 40 chr17 12969389 12969541 -82303110 + B1F SINE Alu 1 148 -1 8 683 596 231 26 0 chr17 12969543 12969660 -82302991 + ID_B1 SINE B4 87 206 -18 8 683 536 208 120 0 chr17 12969683 12969808 -82302843 + B1_Mur2 SINE Alu 1 140 -9 8 683 368 275 81 18 chr17 12969819 12969930 -82302721 - RSINE1 SINE B4 -4 161 44 8 683 735 237 75 182 chr17 12969978 12970010 -82302641 + RMER4A LTR ERVK 15 42 -424 8 683 1159 55 7 0 chr17 12970010 12970155 -82302496 + B1_Mus2 SINE Alu 2 147 0 8 683 735 237 75 182 chr17 12970155 12970612 -82302039 + RMER4A LTR ERVK 43 452 -14 8 683 2045 171 65 15 chr17 12970654 12971051 -82301600 + MTC LTR MaLR 5 421 0 8 683 416 279 69 15 chr17 12971051 12971182 -82301469 + B1F1 SINE Alu 3 140 -9 8 683 883 237 186 4 chr17 12971500 12971794 -82300857 + MTD LTR MaLR 67 421 0 8 683 577 257 226 0 chr17 12972147 12972373 -82300278 - RMER15 LTR ERVL 0 575 299 8 683 898 160 188 27 chr17 12972736 12972922 -82299729 - B3 SINE B2 0 216 1 8 683 573 272 111 54 chr17 12972980 12973260 -82299391 - RMER20B LTR ERVK -235 392 97 8 683 324 310 24 37 chr17 12973481 12973618 -82299033 - L1MD1 LINE L1 -66 6293 6059 8 683 390 21 0 0 chr17 12973618 12973665 -82298986 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 683 476 240 60 37 chr17 12973668 12973682 -82298969 + B1F1 SINE Alu 13 148 0 8 683 560 241 0 25 chr17 12973682 12973801 -82298850 + ID_B1 SINE B4 109 224 0 8 683 245 231 90 0 chr17 12973824 12973902 -82298749 - L1MD1 LINE L1 -324 6035 5951 8 683 413 265 30 30 chr17 12973940 12974041 -82298610 + PB1 SINE Alu 13 113 -14 8 683 406 287 78 0 chr17 12974438 12974567 -82298084 - B1F1 SINE Alu -7 142 4 8 683 514 269 35 9 chr17 12974615 12974731 -82297920 + ID_B1 SINE B4 93 211 -13 8 683 370 308 55 114 chr17 12974711 12974931 -82297720 + B4 SINE B4 17 223 -69 8 683 562 208 101 31 chr17 12974804 12974933 -82297718 + B1_Mus1 SINE Alu 11 148 0 8 85 442 355 89 86 chr17 12975860 12976140 -82296511 + B4 SINE B4 1 281 -11 8 684 815 236 15 46 chr17 12976545 12976740 -82295911 - MTD LTR MaLR -14 405 217 8 684 981 167 15 15 chr17 12976751 12976946 -82295705 - B2_Mm2 SINE B2 0 195 1 8 684 732 213 0 0 chr17 12977004 12977126 -82295525 - MTD LTR MaLR -230 189 68 8 684 198 0 0 0 chr17 12977132 12977154 -82295497 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 8 684 1263 32 0 77 chr17 12977154 12977324 -82295327 - B2_Mm1a SINE B2 -35 158 2 8 684 397 198 71 71 chr17 12977324 12977390 -82295261 - MTD LTR MaLR -332 87 16 8 684 230 0 0 32 chr17 12977390 12977421 -82295230 + (TAA)n Simple_repeat Simple_repeat 2 31 0 8 684 397 198 71 71 chr17 12977421 12977441 -82295210 - MTD LTR MaLR -404 15 1 8 684 386 239 53 44 chr17 12977502 12977616 -82295035 + PB1D10 SINE Alu 2 116 -1 8 684 1679 124 84 122 chr17 12977625 12977993 -82294658 - ORR1B1 LTR MaLR 0 394 41 8 684 2398 156 71 69 chr17 12978000 12978216 -82294435 - ORR1B1-int LTR MaLR 0 1509 1305 8 684 1252 27 0 7 chr17 12978216 12978364 -82294287 + B1_Mm SINE Alu 1 147 0 8 684 2398 156 71 69 chr17 12978364 12978651 -82294000 - ORR1B1-int LTR MaLR -205 1304 1005 8 684 337 108 21 55 chr17 12978653 12978765 -82293886 - B2_Mm2 SINE B2 -3 192 47 8 684 1125 61 34 0 chr17 12978882 12979029 -82293622 - B2_Mm2 SINE B2 -43 152 1 8 684 5484 130 37 54 chr17 12979029 12980027 -82292624 - ORR1B1-int LTR MaLR -407 1556 576 8 684 3433 170 45 19 chr17 12980050 12980674 -82291977 - ORR1B1-int LTR MaLR -1323 640 1 8 684 1933 139 19 89 chr17 12980678 12981050 -82291601 - ORR1B1 LTR MaLR -8 386 41 8 684 686 287 107 40 chr17 12981059 12981101 -82291550 + B4A SINE B4 1 41 -251 8 684 3185 128 102 37 chr17 12981101 12981749 -82290902 + RMER6C LTR ERVK 1 690 0 8 684 686 287 107 40 chr17 12981749 12981906 -82290745 + B4A SINE B4 42 195 -97 8 684 396 0 0 0 chr17 12981906 12981950 -82290701 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 684 686 287 107 40 chr17 12981950 12982021 -82290630 + B4A SINE B4 196 289 -3 8 684 201 39 0 0 chr17 12982151 12982177 -82290474 + (CA)n Simple_repeat Simple_repeat 2 27 0 8 684 393 256 47 0 chr17 12982213 12982299 -82290352 + PB1D9 SINE Alu 26 115 -5 8 684 611 216 35 41 chr17 12982385 12982530 -82290121 - B1F2 SINE Alu 0 149 6 8 684 273 295 32 89 chr17 12982431 12982554 -82290097 - MT2B LTR ERVL -341 260 145 8 684 376 197 26 155 chr17 12982806 12982935 -82289716 - B3 SINE B2 -6 210 74 8 684 811 200 135 10 chr17 12982985 12983177 -82289474 - B3 SINE B2 0 216 1 8 684 648 330 56 5 chr17 12983402 12983615 -82289036 - MER58A DNA MER1_type 0 224 1 8 684 371 184 52 13 chr17 12984365 12984442 -82288209 - B1F SINE Alu -65 84 5 8 684 242 305 0 0 chr17 12984389 12984448 -82288203 - B4A SINE B4 -150 142 84 8 684 411 306 0 0 chr17 12984924 12985022 -82287629 + B1F1 SINE Alu 23 120 -29 8 684 199 388 12 0 chr17 12985371 12985456 -82287195 - MIRb SINE MIR -146 122 37 8 684 263 65 47 31 chr17 12986011 12986075 -82286576 + (CAAAAA)n Simple_repeat Simple_repeat 2 66 0 8 684 780 213 26 7 chr17 12986194 12986345 -82286306 - ID_B1 SINE B4 0 224 71 8 684 567 282 13 13 chr17 12986625 12986776 -82285875 - B3A SINE B2 -47 151 1 8 684 198 0 0 0 chr17 12986780 12986802 -82285849 + (T)n Simple_repeat Simple_repeat 1 22 0 8 684 1382 87 5 0 chr17 12987772 12987957 -82284694 + B2_Mm1t SINE B2 2 187 -6 9 684 288 315 0 0 chr17 12988041 12988114 -82284537 - ID_B1 SINE B4 -34 190 118 9 684 453 138 0 0 chr17 12988726 12988820 -82283831 + (TG)n Simple_repeat Simple_repeat 2 95 0 9 684 818 186 0 28 chr17 12988942 12989086 -82283565 + B1_Mus1 SINE Alu 2 141 -7 9 684 255 274 85 0 chr17 12989191 12989297 -82283354 - PB1D9 SINE Alu -1 119 5 9 684 335 239 33 66 chr17 12989452 12989573 -82283078 - PB1D10 SINE Alu 0 117 1 9 684 218 280 20 0 chr17 12989611 12989661 -82282990 + L2c LINE L2 3290 3340 -47 9 684 322 287 11 33 chr17 12989750 12989840 -82282811 - ID_B1 SINE B4 -58 166 79 9 684 1260 182 0 23 chr17 12989852 12990071 -82282580 + B3 SINE B2 1 214 -2 9 684 360 198 167 10 chr17 12990103 12990205 -82282446 - PB1D9 SINE Alu -2 118 1 9 684 574 106 24 16 chr17 12990334 12990459 -82282192 + (TAGA)n Simple_repeat Simple_repeat 4 129 0 9 684 232 215 92 0 chr17 12990748 12990813 -82281838 + PB1 SINE Alu 55 125 -2 9 684 184 211 0 0 chr17 12991406 12991444 -82281207 - MIR SINE MIR -69 193 156 9 684 288 246 0 0 chr17 12991449 12991518 -82281133 - B1F SINE Alu -2 147 79 9 684 841 279 30 42 chr17 12991645 12991881 -82280770 + B4 SINE B4 42 274 -18 9 684 324 0 0 0 chr17 12991886 12991922 -82280729 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 684 483 245 39 19 chr17 12991993 12992097 -82280554 + B1F1 SINE Alu 27 132 -17 9 684 411 38 0 0 chr17 12992101 12992154 -82280497 + (CAAAA)n Simple_repeat Simple_repeat 5 57 0 9 684 505 259 138 23 chr17 12992641 12992815 -82279836 + B3A SINE B2 5 198 0 9 684 609 258 90 35 chr17 12992910 12993111 -82279540 + B4A SINE B4 2 213 -79 9 684 662 263 56 28 chr17 12993257 12993472 -82279179 + ID_B1 SINE B4 4 224 0 9 684 363 259 145 34 chr17 12993672 12993838 -82278813 - L1ME1 LINE L1 -239 5940 5755 9 684 254 259 167 41 chr17 12993854 12994131 -82278520 - L1ME1 LINE L1 -517 5662 5348 9 684 1176 48 7 7 chr17 12994195 12994341 -82278310 - B1_Mus2 SINE Alu 0 147 2 9 684 367 282 0 0 chr17 12994342 12994413 -82278238 - B1F SINE Alu -78 71 1 9 684 285 239 15 0 chr17 12994413 12994480 -82278171 - L1M LINE L1 -968 5376 5309 9 684 368 252 52 61 chr17 12994509 12994704 -82277947 + B3A SINE B2 2 195 0 9 684 234 0 0 0 chr17 12994705 12994731 -82277920 + (TA)n Simple_repeat Simple_repeat 2 27 0 9 684 8808 72 13 2 chr17 12995375 12997252 -82275399 + L1_Mus1 LINE L1 4660 6558 -9 9 684 1283 7 0 14 chr17 12997265 12997411 -82275240 + B1_Mm SINE Alu 2 145 -2 9 684 23 0 0 0 chr17 12997422 12997445 -82275206 + AT_rich Low_complexity Low_complexity 1 23 0 9 684 265 311 138 84 chr17 12997901 12998126 -82274525 + MLT1E1A LTR MaLR 281 517 -163 9 684 435 278 48 0 chr17 12998178 12998304 -82274347 - B1F2 SINE Alu -17 132 1 9 684 608 188 20 0 chr17 12998411 12998512 -82274139 + B1_Mur4 SINE Alu 38 140 -10 9 684 753 12 0 0 chr17 12998531 12998617 -82274034 + (GAAA)n Simple_repeat Simple_repeat 4 89 0 9 684 1112 92 6 0 chr17 12998620 12998783 -82273868 + (GGGAA)n Simple_repeat Simple_repeat 4 167 0 9 684 1262 120 11 0 chr17 12998896 12999087 -82273564 + B2_Mm1t SINE B2 1 193 0 9 684 212 186 171 44 chr17 12999150 12999254 -82273397 - MIR SINE MIR -55 153 41 9 684 513 57 0 14 chr17 12999901 12999912 -82272739 - B1_Mur4 SINE Alu 0 150 140 9 684 188 35 35 0 chr17 12999912 12999941 -82272710 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 9 684 513 57 0 14 chr17 12999941 13000000 -82272651 - B1_Mur4 SINE Alu -11 139 81 9 684 562 91 0 0 chr17 13000000 13000077 -82272574 - B1_Mus2 SINE Alu -70 77 1 1 684 294 289 0 88 chr17 13000077 13000091 -82272560 - MT2B LTR ERVL -367 234 152 2 684 257 273 0 43 chr17 13000091 13000115 -82272536 - ORR1B1-int LTR MaLR -785 724 615 3 684 757 199 13 20 chr17 13000122 13000271 -82272380 - B1_Mur3 SINE Alu 0 149 2 4 684 347 97 310 34 chr17 13000280 13000396 -82272255 - B2_Mm2 SINE B2 -1 194 47 5 684 1310 85 23 6 chr17 13000443 13000620 -82272031 - B2_Mm2 SINE B2 -14 181 2 6 684 771 210 77 39 chr17 13000637 13000845 -82271806 - B3 SINE B2 0 216 1 7 684 580 217 41 8 chr17 13000864 13000985 -82271666 - B1_Mus1 SINE Alu -1 147 23 8 684 667 217 7 27 chr17 13000988 13001135 -82271516 - B1F SINE Alu -1 148 5 9 684 216 0 0 0 chr17 13001411 13001435 -82271216 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 684 957 95 0 0 chr17 13001550 13001697 -82270954 + (TC)n Simple_repeat Simple_repeat 1 147 0 1 684 345 309 101 22 chr17 13002075 13002254 -82270397 - L1MB4 LINE L1 -206 5974 5782 1 684 244 286 14 0 chr17 13002417 13002487 -82270164 - L1MB4 LINE L1 -553 5631 5561 1 684 354 227 71 10 chr17 13002718 13002816 -82269835 + LTR55 LTR ERV 150 253 -295 1 684 474 344 118 43 chr17 13002826 13003323 -82269328 - MLT2B4 LTR ERVL 0 515 1 1 684 2470 106 139 53 chr17 13003572 13004041 -82268610 - Lx2 LINE L1 0 6997 6489 1 684 460 313 22 16 chr17 13004330 13004512 -82268139 + B3A SINE B2 1 183 -15 1 684 217 298 5 37 chr17 13004641 13004736 -82267915 + MIRm SINE MIR 166 264 -12 1 684 26 64 0 0 chr17 13005045 13005092 -82267559 + AT_rich Low_complexity Low_complexity 1 47 0 1 684 239 235 187 47 chr17 13005696 13005803 -82266848 + Charlie4 DNA MER1_type 1818 1939 -22 1 684 3755 117 150 14 chr17 13005874 13006539 -82266112 - RMER6A LTR ERVK 0 756 1 2 684 344 331 73 11 chr17 13006791 13006968 -82265683 - ID_B1 SINE B4 -35 189 2 2 684 5411 135 31 67 chr17 13007294 13008215 -82264436 - RMER19B LTR ERVK 0 902 15 2 684 4590 148 43 19 chr17 13008470 13009266 -82263385 + RMER13A LTR ERVK 1 815 -45 2 684 482 125 0 0 chr17 13009689 13009761 -82262890 - B2_Mm2 SINE B2 -88 107 36 2 684 448 306 86 48 chr17 13010406 13010674 -82261977 + B4 SINE B4 2 279 -13 2 684 655 253 115 0 chr17 13011173 13011355 -82261296 + B3 SINE B2 2 204 -12 2 684 213 121 0 0 chr17 13011442 13011475 -82261176 + (GGA)n Simple_repeat Simple_repeat 2 34 0 2 684 312 83 0 0 chr17 13014003 13014051 -82258600 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 2 684 3617 120 24 0 chr17 13014082 13014479 -82258172 + Lx3B LINE L1 755 1158 -5826 2 684 351 0 0 0 chr17 13014479 13014518 -82258133 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 684 28960 108 30 14 chr17 13014518 13015456 -82257195 + Lx3B LINE L1 1159 2104 -3782 2 684 1733 170 42 78 chr17 13015456 13015864 -82256787 + RLTR9C LTR ERVK 1 393 0 3 684 28960 107 30 14 chr17 13015864 13018502 -82254149 + Lx3B LINE L1 2105 4795 -1091 2 684 2812 47 12 3 chr17 13018502 13018843 -82253808 + ORR1A1 LTR MaLR 1 344 -2 3 684 28960 111 52 12 chr17 13018843 13020944 -82251707 + Lx3B LINE L1 4796 6972 -1 2 684 693 172 95 56 chr17 13020970 13021149 -82251502 + B2_Mm2 SINE B2 2 187 -8 3 684 250 262 37 12 chr17 13021286 13021367 -82251284 + BC1_Mm scRNA scRNA 17 99 -53 3 684 216 0 0 0 chr17 13021454 13021478 -82251173 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 684 216 259 0 69 chr17 13021537 13021595 -82251056 + ID SINE ID 1 54 -170 3 684 710 164 105 19 chr17 13021595 13021757 -82250894 + ORR1B2 LTR MaLR 1 176 -191 3 684 251 176 19 38 chr17 13021882 13021935 -82250716 + RLTR11A LTR ERVK 123 174 -354 3 684 1165 219 42 5 chr17 13022128 13022398 -82250253 + ORR1C1 LTR MaLR 80 378 0 3 684 468 238 143 45 chr17 13022398 13022532 -82250119 + ID_B1 SINE B4 45 193 -31 3 684 25 0 0 0 chr17 13022613 13022638 -82250013 + AT_rich Low_complexity Low_complexity 1 25 0 4 684 507 212 88 9 chr17 13022647 13022761 -82249890 - RSINE1 SINE B4 -39 126 4 4 684 259 238 49 24 chr17 13023998 13024080 -82248571 - Tigger7 DNA MER2_type 0 2491 2408 4 684 1176 298 77 6 chr17 13024137 13024461 -82248190 - Tigger7 DNA MER2_type -2144 347 1 4 684 336 243 241 89 chr17 13024715 13024873 -82247778 - ID_B1 SINE B4 -36 188 7 4 684 464 285 41 112 chr17 13025446 13025471 -82247180 + B4 SINE B4 69 225 -66 4 684 742 175 28 49 chr17 13025471 13025615 -82247036 + B1_Mus2 SINE Alu 7 147 0 4 684 227 276 17 0 chr17 13025619 13025677 -82246974 + (CACAA)n Simple_repeat Simple_repeat 3 61 0 4 684 273 282 26 0 chr17 13025770 13025844 -82246807 + PB1 SINE Alu 37 112 -15 4 684 2584 125 29 12 chr17 13025844 13026256 -82246395 - MTC LTR MaLR 0 421 3 4 684 4723 89 62 10 chr17 13026529 13027240 -82245411 - RMER17A LTR ERVK -3 748 1 4 684 286 246 86 14 chr17 13027408 13027478 -82245173 + B3A SINE B2 98 172 -26 5 684 434 196 10 0 chr17 13027478 13027580 -82245071 + GA-rich Low_complexity Low_complexity 1 103 0 5 684 404 271 54 27 chr17 13027601 13027749 -82244902 - MLT1A0 LTR MaLR -28 337 186 5 684 477 0 0 0 chr17 13028076 13028129 -82244522 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 684 819 140 0 0 chr17 13028129 13028286 -82244365 + (GA)n Simple_repeat Simple_repeat 1 157 0 5 684 1128 68 7 20 chr17 13028399 13028549 -82244102 + B1_Mus1 SINE Alu 1 148 0 5 684 1143 248 104 16 chr17 13028565 13028873 -82243778 + MTD LTR MaLR 68 402 -17 5 684 315 237 0 0 chr17 13029687 13029746 -82242905 + B3A SINE B2 2 60 -138 5 684 211 272 183 12 chr17 13029746 13029769 -82242882 + B4A SINE B4 2 97 -195 5 684 550 271 0 33 chr17 13029846 13029968 -82242683 - ID_B1 SINE B4 -8 216 99 5 684 1446 219 61 45 chr17 13029998 13030328 -82242323 + ORR1D2 LTR MaLR 36 370 0 6 684 180 0 0 0 chr17 13030500 13030520 -82242131 + (TTTTG)n Simple_repeat Simple_repeat 4 23 0 6 684 480 276 8 54 chr17 13030529 13030659 -82241992 - B1F SINE Alu 0 149 26 6 684 555 243 35 62 chr17 13031035 13031180 -82241471 - B1F SINE Alu -5 144 4 6 684 443 315 0 0 chr17 13031282 13031393 -82241258 - RSINE1 SINE B4 -52 113 3 6 684 1241 83 77 16 chr17 13031471 13031654 -82240997 + B2_Mm2 SINE B2 2 195 0 6 684 426 223 0 112 chr17 13031684 13031700 -82240951 + MT2B LTR ERVL 155 157 -444 6 684 677 174 8 17 chr17 13031700 13031817 -82240834 + B1_Mus1 SINE Alu 4 119 -29 6 684 236 262 33 187 chr17 13032173 13032323 -82240328 + MTEa LTR MaLR 240 366 -13 6 684 652 341 42 26 chr17 13033118 13033383 -82239268 + B4A SINE B4 24 292 0 6 684 314 107 18 0 chr17 13033391 13033447 -82239204 + (CA)n Simple_repeat Simple_repeat 1 57 0 7 684 736 296 25 130 chr17 13035502 13035597 -82237054 + B4 SINE B4 1 85 -207 7 684 189 74 0 0 chr17 13035597 13035624 -82237027 + (CAA)n Simple_repeat Simple_repeat 2 28 0 7 684 736 296 25 130 chr17 13035624 13035636 -82237015 + B4 SINE B4 86 86 -206 7 684 968 230 30 0 chr17 13035636 13035836 -82236815 + B3 SINE B2 1 206 -10 7 684 736 296 25 130 chr17 13035836 13036049 -82236602 + B4 SINE B4 86 288 -4 7 684 423 0 0 0 chr17 13036098 13036145 -82236506 + (TAAAA)n Simple_repeat Simple_repeat 4 50 0 7 684 934 181 32 64 chr17 13036197 13036415 -82236236 + B3 SINE B2 5 215 -1 7 684 670 234 146 5 chr17 13036421 13036576 -82236075 + B3 SINE B2 1 167 -49 7 684 303 93 0 0 chr17 13036576 13036619 -82236032 + (CATA)n Simple_repeat Simple_repeat 4 46 0 7 684 670 234 146 5 chr17 13036619 13036648 -82236003 + B3 SINE B2 168 210 -6 7 684 297 209 0 87 chr17 13036654 13036769 -82235882 - MER33 DNA MER1_type -65 259 155 7 684 3401 31 13 0 chr17 13037749 13038140 -82234511 - MTA_Mm LTR MaLR 0 396 1 7 684 643 272 22 0 chr17 13038219 13038355 -82234296 + B1F1 SINE Alu 1 139 -10 8 684 238 237 0 136 chr17 13038370 13038386 -82234265 + MT2B LTR ERVL 152 222 -374 8 684 383 185 0 30 chr17 13038386 13038453 -82234198 + B1_Mur3 SINE Alu 1 65 -84 8 684 207 0 0 0 chr17 13040336 13040359 -82232292 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 684 297 0 0 0 chr17 13040523 13040556 -82232095 + (TA)n Simple_repeat Simple_repeat 1 33 0 8 684 335 203 21 3 chr17 13040619 13040702 -82231949 - L1MC4 LINE L1 -1499 6543 6434 8 684 243 0 0 0 chr17 13041237 13041264 -82231387 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 684 1605 37 0 0 chr17 13041272 13041462 -82231189 - B2_Mm1t SINE B2 -3 190 1 8 684 1437 83 5 0 chr17 13041495 13041687 -82230964 + B2_Mm1a SINE B2 1 193 0 8 684 1107 308 52 29 chr17 13041700 13042179 -82230472 + Lx9 LINE L1 7087 7576 -68 8 684 699 202 55 55 chr17 13042184 13042367 -82230284 - B3A SINE B2 -15 183 1 9 684 540 219 11 111 chr17 13043128 13043308 -82229343 + RSINE1 SINE B4 4 165 0 9 684 680 0 12 0 chr17 13043580 13043660 -82228991 + (TC)n Simple_repeat Simple_repeat 2 82 0 9 684 225 0 0 0 chr17 13043660 13043684 -82228967 + (TG)n Simple_repeat Simple_repeat 2 26 0 9 684 181 250 93 23 chr17 13045070 13045156 -82227495 + MIRb SINE MIR 108 199 -69 9 684 1168 62 7 0 chr17 13045159 13045304 -82227347 + B1_Mm SINE Alu 1 146 -1 9 684 196 40 38 57 chr17 13045304 13045357 -82227294 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 9 684 557 28 0 14 chr17 13046383 13046455 -82226196 + (GGAA)n Simple_repeat Simple_repeat 1 71 0 9 684 1332 229 105 26 chr17 13047269 13047582 -82225069 - MTE2b LTR MaLR -41 338 1 9 684 219 146 0 0 chr17 13047742 13047783 -82224868 + (G)n Simple_repeat Simple_repeat 1 41 0 9 684 21 0 0 0 chr17 13048802 13048823 -82223828 + AT_rich Low_complexity Low_complexity 1 21 0 1 684 419 186 184 8 chr17 13048895 13049020 -82223631 + B2_Mm2 SINE B2 47 193 -2 1 684 910 245 45 20 chr17 13049030 13049230 -82223421 + B3 SINE B2 1 205 -11 1 684 473 199 435 7 chr17 13049231 13049378 -82223273 - B3 SINE B2 -6 210 1 1 684 775 247 71 52 chr17 13049379 13049704 -82222947 + L1ME2z LINE L1 5335 5665 -499 1 684 298 223 27 146 chr17 13049708 13049818 -82222833 + B3 SINE B2 2 98 -118 1 684 1442 65 0 21 chr17 13049844 13050033 -82222618 + B2_Mm2 SINE B2 1 185 -10 1 684 396 281 6 52 chr17 13050036 13050209 -82222442 + L1ME2z LINE L1 5724 5888 -556 1 684 486 0 0 0 chr17 13050778 13050832 -82221819 + (CAAAC)n Simple_repeat Simple_repeat 5 58 0 1 684 1014 218 14 19 chr17 13050901 13051116 -82221535 - B3 SINE B2 0 216 3 1 684 21 57 0 0 chr17 13051249 13051284 -82221367 + AT_rich Low_complexity Low_complexity 1 35 0 1 684 1767 198 43 89 chr17 13051506 13051586 -82221065 + MTD LTR MaLR 1 63 -356 1 684 929 152 202 12 chr17 13051586 13051759 -82220892 + B3 SINE B2 1 206 -10 1 684 1767 198 43 89 chr17 13051759 13052117 -82220534 + MTD LTR MaLR 64 419 0 1 684 282 333 127 0 chr17 13052248 13052374 -82220277 + L4 LINE RTE 1366 1507 -522 1 684 356 271 177 27 chr17 13052581 13052865 -82219786 - MTEa LTR MaLR 0 379 1 1 684 345 47 0 0 chr17 13053107 13053150 -82219501 + (A)n Simple_repeat Simple_repeat 1 43 0 1 684 2361 89 3 58 chr17 13053313 13053658 -82218993 + ORR1A2 LTR MaLR 1 326 -1 1 684 315 269 0 0 chr17 13053736 13053866 -82218785 + (TG)n Simple_repeat Simple_repeat 1 130 0 1 684 389 260 102 56 chr17 13054127 13054305 -82218346 - B4A SINE B4 -59 233 55 1 684 252 250 60 36 chr17 13056074 13056157 -82216494 + MIRb SINE MIR 91 175 -93 1 684 1034 64 229 6 chr17 13056345 13056502 -82216149 - B2_Mm2 SINE B2 -3 192 1 1 684 2930 98 6 30 chr17 13056503 13057005 -82215646 + RMER2 LTR ERV1 7 531 -36 1 684 738 304 157 37 chr17 13057070 13057477 -82215174 - MLT1C LTR MaLR -8 459 4 1 684 403 215 0 41 chr17 13057593 13057690 -82214961 - L1MB3 LINE L1 -75 6108 6016 1 684 1128 70 31 12 chr17 13057700 13057860 -82214791 + B2_Mm1t SINE B2 17 179 -14 1 684 387 82 0 0 chr17 13057896 13057957 -82214694 + B2_Mm1a SINE B2 127 187 -6 1 684 492 221 0 0 chr17 13057974 13058087 -82214564 + (TA)n Simple_repeat Simple_repeat 1 113 0 1 684 244 243 14 0 chr17 13058306 13058376 -82214275 + ORR1C2 LTR MaLR 67 137 -247 1 684 405 242 0 0 chr17 13058570 13058669 -82213982 - L1MB3 LINE L1 -273 5910 5812 1 684 1906 65 54 2 chr17 13058810 13059105 -82213546 - ORR1A2 LTR MaLR -8 338 31 1 684 1182 282 68 9 chr17 13059198 13059520 -82213131 + MTE2b LTR MaLR 5 345 -34 1 684 372 316 32 86 chr17 13059740 13059927 -82212724 - MLT1N2 LTR MaLR -38 524 348 1 684 297 0 0 0 chr17 13060401 13060434 -82212217 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 684 1043 134 0 29 chr17 13060434 13060784 -82211867 + (TG)n Simple_repeat Simple_repeat 1 339 0 1 684 293 0 27 0 chr17 13061342 13061379 -82211272 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 684 231 125 0 0 chr17 13061817 13061857 -82210794 + (T)n Simple_repeat Simple_repeat 1 40 0 1 684 292 282 248 8 chr17 13061930 13062055 -82210596 + B4A SINE B4 1 155 -137 1 684 1321 90 0 0 chr17 13062205 13062382 -82210269 - B2_Mm2 SINE B2 -18 177 1 1 684 281 261 129 93 chr17 13062690 13062884 -82209767 + ORR1E LTR MaLR 158 358 -1 1 684 245 217 58 0 chr17 13062963 13063032 -82209619 + PB1D10 SINE Alu 43 115 -2 1 684 234 274 32 116 chr17 13063044 13063138 -82209513 - MLT1F2 LTR MaLR -411 149 64 1 684 966 94 6 63 chr17 13063138 13063155 -82209496 + B1_Mur4 SINE Alu 1 17 -133 1 684 1009 146 54 204 chr17 13063155 13063636 -82209015 - RMER17C LTR ERVK -1 409 1 1 684 966 94 6 63 chr17 13063636 13063777 -82208874 + B1_Mur4 SINE Alu 18 150 0 1 684 677 207 37 7 chr17 13063890 13064026 -82208625 + RSINE1 SINE B4 22 161 -4 1 684 921 116 0 0 chr17 13065802 13065975 -82206676 + (TC)n Simple_repeat Simple_repeat 2 174 0 1 684 826 138 0 44 chr17 13065975 13066111 -82206540 - B1_Mur4 SINE Alu -20 130 1 1 684 1116 250 97 11 chr17 13066825 13067177 -82205474 - Lx8 LINE L1 -3 7470 7089 1 684 570 272 62 56 chr17 13067177 13067356 -82205295 - ID_B1 SINE B4 -18 206 27 1 684 997 56 200 24 chr17 13067506 13067671 -82204980 - B2_Mm2 SINE B2 -1 194 1 1 684 1534 212 99 14 chr17 13067696 13068041 -82204610 - MTD LTR MaLR -43 376 3 1 684 387 229 12 0 chr17 13068043 13068126 -82204525 + B4A SINE B4 207 290 -2 1 684 242 198 22 110 chr17 13068102 13068193 -82204458 + MER50 LTR ERV1 49 131 -603 1 684 301 305 68 0 chr17 13068194 13068312 -82204339 + L1MA6 LINE L1 6175 6300 0 1 684 410 283 0 89 chr17 13068317 13068441 -82204210 + PB1D10 SINE Alu 3 115 -2 1 684 811 225 46 4 chr17 13069037 13069286 -82203365 - RMER4B LTR ERVK -9 576 283 1 684 445 226 11 0 chr17 13071520 13071632 -82201019 - PB1D10 SINE Alu 0 120 1 1 684 340 236 0 14 chr17 13072401 13072474 -82200177 + PB1D9 SINE Alu 47 118 -2 1 684 728 184 109 7 chr17 13073539 13073676 -82198975 + RSINE1 SINE B4 15 165 0 1 684 1302 92 35 0 chr17 13073852 13074025 -82198626 + B2_Mm1t SINE B2 1 179 -14 1 684 358 88 394 19 chr17 13074076 13074180 -82198471 + B2_Mm2 SINE B2 47 189 -6 1 684 761 149 137 42 chr17 13074192 13074360 -82198291 - B2_Mm2 SINE B2 -10 185 2 1 684 189 340 38 0 chr17 13074360 13074413 -82198238 - L2b LINE L2 -13 3362 3308 1 684 1044 123 5 48 chr17 13074463 13074651 -82198000 - URR1B DNA MER1_type 0 225 46 1 684 277 300 9 74 chr17 13074789 13074874 -82197777 + B3A SINE B2 97 180 -18 1 684 522 93 0 0 chr17 13074874 13074960 -82197691 + (CA)n Simple_repeat Simple_repeat 2 87 0 1 684 277 300 9 74 chr17 13074960 13074982 -82197669 + B3A SINE B2 181 197 -1 1 684 808 142 42 56 chr17 13075019 13075161 -82197490 + B1_Mur4 SINE Alu 10 149 -1 1 684 1329 79 10 35 chr17 13075167 13075364 -82197287 + B2_Mm1t SINE B2 2 193 0 1 684 338 267 0 13 chr17 13075973 13076049 -82196602 - B1_Mur1 SINE Alu -7 142 68 1 684 377 273 91 0 chr17 13076068 13076156 -82196495 - ID_B1 SINE B4 -6 218 123 1 684 918 221 24 24 chr17 13076271 13076480 -82196171 + B3 SINE B2 1 209 -7 1 684 236 265 39 65 chr17 13077355 13077479 -82195172 + MIRc SINE MIR 27 153 -115 1 684 1895 248 102 100 chr17 13077797 13078206 -82194445 + RCHARR1 DNA MER1_type 142 528 -446 1 684 1275 34 0 0 chr17 13078206 13078353 -82194298 + B1_Mus2 SINE Alu 1 147 0 1 684 1895 248 102 100 chr17 13078353 13078696 -82193955 + RCHARR1 DNA MER1_type 529 896 -78 1 684 378 238 109 0 chr17 13078683 13078784 -82193867 - PB1D9 SINE Alu 0 120 9 1 684 336 237 95 21 chr17 13078790 13078885 -82193766 + RCHARR1 DNA MER1_type 869 970 -4 1 684 426 225 191 53 chr17 13078979 13079167 -82193484 + B3 SINE B2 3 216 0 1 684 186 322 90 22 chr17 13079320 13079409 -82193242 - L2a LINE L2 -216 3210 3116 1 684 230 219 210 42 chr17 13080484 13080603 -82192048 + MT2B2 LTR ERVL 140 278 -306 1 684 568 147 10 10 chr17 13080534 13080630 -82192021 + B1_Mur2 SINE Alu 54 149 0 1 684 1302 172 19 5 chr17 13081962 13082178 -82190473 - ID_B1 SINE B4 0 224 6 1 684 186 290 174 0 chr17 13085220 13085289 -82187362 - MIRm SINE MIR -138 138 58 1 684 1028 264 10 18 chr17 13086653 13086892 -82185759 + ID_B1 SINE B4 8 238 -54 1 684 191 256 185 17 chr17 13087802 13087921 -82184730 + MER5B DNA MER1_type 14 152 -26 1 684 419 294 27 47 chr17 13088070 13088220 -82184431 + B1F SINE Alu 3 149 0 1 684 603 40 0 0 chr17 13089452 13089526 -82183125 + (CA)n Simple_repeat Simple_repeat 1 74 0 1 684 1649 42 0 0 chr17 13089684 13089877 -82182774 + B2_Mm1a SINE B2 1 193 0 1 684 193 282 11 86 chr17 13089975 13090068 -82182583 - MIR SINE MIR -104 104 19 1 684 219 36 0 0 chr17 13090268 13090296 -82182355 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 1 684 3761 95 38 31 chr17 13090328 13090881 -82181770 + RLTR31B_Mm LTR ERVK 1 557 0 1 684 550 289 6 29 chr17 13090943 13091444 -82181207 + GA-rich Low_complexity Low_complexity 1 489 0 1 684 182 279 6 30 chr17 13091469 13091635 -82181016 + GA-rich Low_complexity Low_complexity 1 162 0 1 684 1276 34 0 0 chr17 13091879 13092026 -82180625 + B1_Mus2 SINE Alu 1 147 0 1 684 782 196 136 0 chr17 13092055 13092239 -82180412 - B3 SINE B2 -7 209 1 1 684 480 235 48 10 chr17 13093170 13093273 -82179378 + B1_Mur1 SINE Alu 1 107 -42 1 684 811 107 34 0 chr17 13093271 13093420 -82179231 + RMER17B LTR ERVK 310 463 -495 1 684 311 164 18 0 chr17 13093427 13093482 -82179169 + B1F1 SINE Alu 93 148 -1 1 684 1118 199 19 0 chr17 13093491 13093697 -82178954 + B3 SINE B2 1 210 -6 1 684 746 178 20 33 chr17 13093941 13094092 -82178559 - B1_Mur1 SINE Alu 0 149 1 1 684 406 324 135 28 chr17 13094253 13094388 -82178263 - Charlie1a DNA MER1_type -669 786 654 1 684 853 248 13 71 chr17 13094388 13094614 -82178037 - ID_B1 SINE B4 -11 213 1 1 684 406 324 135 28 chr17 13094614 13094767 -82177884 - Charlie1a DNA MER1_type -802 653 467 1 684 867 171 13 23 chr17 13094773 13094968 -82177683 + B2_Mm2 SINE B2 4 193 0 1 684 1125 216 0 5 chr17 13094969 13095183 -82177468 + B3 SINE B2 4 216 0 1 684 473 321 53 131 chr17 13095341 13095753 -82176898 - Charlie1a DNA MER1_type -1039 416 37 1 684 216 179 0 0 chr17 13096745 13096784 -82175867 + G-rich Low_complexity Low_complexity 3 41 0 1 684 916 83 68 0 chr17 13096806 13096938 -82175713 + B1_Mus2 SINE Alu 1 141 -6 1 684 213 39 0 0 chr17 13096941 13096967 -82175684 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 2 684 248 26 0 71 chr17 13097251 13097293 -82175358 + (T)n Simple_repeat Simple_repeat 1 39 0 2 684 966 123 7 0 chr17 13097617 13097755 -82174896 + B1_Mus1 SINE Alu 1 139 -9 2 684 501 236 9 9 chr17 13097795 13097906 -82174745 - PB1D10 SINE Alu 0 117 7 2 684 538 244 190 43 chr17 13097918 13098171 -82174480 - B4 SINE B4 0 292 3 2 684 376 225 40 211 chr17 13099658 13099833 -82172818 + ID_B1 SINE B4 80 224 0 2 684 267 294 85 31 chr17 13099835 13099965 -82172686 + RSINE1 SINE B4 1 137 -28 2 684 945 142 136 0 chr17 13099992 13100161 -82172490 + B2_Mm2 SINE B2 2 193 -2 2 684 22 0 0 0 chr17 13100163 13100185 -82172466 + AT_rich Low_complexity Low_complexity 1 22 0 2 684 1282 27 0 0 chr17 13100240 13100387 -82172264 - B1_Mm SINE Alu 0 147 1 2 684 231 36 0 0 chr17 13101071 13101099 -82171552 + (T)n Simple_repeat Simple_repeat 1 28 0 2 684 1234 55 0 0 chr17 13101099 13101245 -82171406 - B1_Mus2 SINE Alu 0 147 2 2 684 564 223 23 15 chr17 13101455 13101587 -82171064 + B3 SINE B2 81 213 -3 2 684 207 0 0 0 chr17 13101757 13101780 -82170871 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 684 354 45 0 0 chr17 13102168 13102212 -82170439 + (TAA)n Simple_repeat Simple_repeat 3 46 0 2 684 1224 34 0 7 chr17 13102971 13103118 -82169533 + B1_Mm SINE Alu 2 147 0 2 684 207 0 0 0 chr17 13103122 13103145 -82169506 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2 684 216 0 0 0 chr17 13103449 13103473 -82169178 + (A)n Simple_repeat Simple_repeat 1 24 0 2 684 674 266 67 10 chr17 13103630 13103824 -82168827 - B3 SINE B2 -9 207 3 2 684 288 77 0 0 chr17 13104426 13104465 -82168186 + (TTCC)n Simple_repeat Simple_repeat 3 41 0 2 684 2074 251 59 11 chr17 13104762 13105502 -82167149 + Lx5 LINE L1 6455 7032 -18 2 684 1409 88 0 15 chr17 13105590 13105786 -82166865 + B2_Mm2 SINE B2 2 194 -1 2 684 315 370 0 0 chr17 13106183 13106283 -82166368 - PB1D10 SINE Alu -8 109 10 2 684 400 239 65 0 chr17 13106316 13106408 -82166243 - B1_Mur1 SINE Alu -8 141 44 2 684 838 146 27 20 chr17 13106446 13106593 -82166058 - B1_Mur3 SINE Alu 0 149 2 2 684 375 276 0 0 chr17 13106975 13107051 -82165600 + RSINE1 SINE B4 12 87 -78 2 85 441 118 72 41 chr17 13107140 13107237 -82165414 + B2_Mm2 SINE B2 91 190 -5 2 685 1462 74 16 0 chr17 13107346 13107535 -82165116 + B2_Mm2 SINE B2 2 193 -2 2 685 24 0 0 0 chr17 13107536 13107560 -82165091 + AT_rich Low_complexity Low_complexity 1 24 0 2 685 628 50 0 0 chr17 13107570 13107650 -82165001 + B1_Mus2 SINE Alu 1 80 -67 2 685 327 271 0 77 chr17 13107650 13107663 -82164988 + MT2B LTR ERVL 192 250 -334 2 685 212 158 0 26 chr17 13107738 13107777 -82164874 + ID2 SINE ID 1 38 -45 2 685 438 245 197 27 chr17 13107833 13107980 -82164671 - B3 SINE B2 -6 210 39 2 685 234 0 0 0 chr17 13110395 13110421 -82162230 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 685 1026 70 0 0 chr17 13110421 13110550 -82162101 - B1_Mm SINE Alu -18 129 1 2 685 1141 89 0 0 chr17 13111918 13112064 -82160587 - B1_Mus2 SINE Alu 0 147 2 2 685 276 336 17 0 chr17 13113410 13113526 -82159125 + PB1D9 SINE Alu 2 119 -1 2 685 21 71 0 0 chr17 13113752 13113794 -82158857 + AT_rich Low_complexity Low_complexity 1 42 0 2 685 1145 105 11 11 chr17 13113794 13113968 -82158683 + B2_Mm2 SINE B2 2 175 -20 2 685 228 268 132 12 chr17 13114291 13114305 -82158346 + MT2B LTR ERVL 145 237 -364 2 685 302 203 174 0 chr17 13114305 13114374 -82158277 + B1_Mus1 SINE Alu 1 81 -67 2 685 997 103 0 46 chr17 13115833 13115986 -82156665 - B1_Mus2 SINE Alu 0 147 2 2 685 869 85 0 71 chr17 13117840 13117980 -82154671 - B1_Mus1 SINE Alu -18 130 1 2 685 1062 89 0 33 chr17 13118347 13118498 -82154153 - B1_Mus1 SINE Alu 0 148 3 2 685 258 253 161 0 chr17 13118591 13118678 -82153973 + B1_Mm SINE Alu 12 112 -8 2 685 640 119 90 18 chr17 13118705 13118816 -82153835 + PB1D9 SINE Alu 2 120 0 2 685 515 244 23 16 chr17 13119704 13119833 -82152818 - B1_Mur1 SINE Alu -1 148 19 2 685 302 180 0 0 chr17 13119894 13119944 -82152707 - B1_Mm SINE Alu -36 111 62 2 685 1225 34 0 7 chr17 13119947 13120096 -82152555 + B1_Mus1 SINE Alu 1 148 0 2 685 376 287 11 0 chr17 13120731 13120825 -82151826 + B3A SINE B2 84 178 -20 2 685 447 241 29 7 chr17 13121065 13121203 -82151448 + B1F2 SINE Alu 1 141 -8 2 685 1202 36 0 0 chr17 13121596 13121734 -82150917 + B1_Mus1 SINE Alu 1 138 -10 2 685 216 0 0 0 chr17 13121734 13121758 -82150893 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 685 764 174 8 8 chr17 13121758 13121905 -82150746 + B1_Mur4 SINE Alu 2 150 0 2 685 283 303 61 0 chr17 13122169 13122268 -82150383 - B1F2 SINE Alu -39 110 6 2 685 430 252 84 0 chr17 13122953 13123060 -82149591 - B3A SINE B2 -65 133 18 2 685 1969 161 148 95 chr17 13123064 13123149 -82149502 - RLTR20A1 LTR ERVK 0 578 481 2 685 465 19 0 0 chr17 13123149 13123203 -82149448 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 685 1969 161 148 95 chr17 13123203 13123275 -82149376 - RLTR20A1 LTR ERVK -98 480 449 2 685 1325 86 21 16 chr17 13123275 13123465 -82149186 - B2_Mm1a SINE B2 -2 191 1 2 685 2280 102 82 18 chr17 13123465 13123855 -82148796 - RLTR20A1 LTR ERVK -130 448 1 2 685 441 264 133 33 chr17 13124090 13124270 -82148381 + B3A SINE B2 1 198 0 2 685 367 238 67 0 chr17 13124629 13124734 -82147917 - PB1 SINE Alu -7 120 9 2 685 904 247 161 78 chr17 13124953 13124985 -82147666 + RMER4B LTR ERVK 15 43 -542 2 685 1242 21 7 0 chr17 13124985 13125129 -82147522 + B1_Mus2 SINE Alu 1 145 -2 2 685 266 0 29 0 chr17 13125129 13125163 -82147488 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 685 904 247 161 78 chr17 13125163 13125349 -82147302 + RMER4B LTR ERVK 44 244 -341 2 685 368 40 0 20 chr17 13125349 13125400 -82147251 + (TGGG)n Simple_repeat Simple_repeat 1 50 0 2 685 408 40 0 0 chr17 13125400 13125449 -82147202 + (CGTG)n Simple_repeat Simple_repeat 4 53 0 2 685 904 247 161 78 chr17 13125449 13125737 -82146914 + RMER4B LTR ERVK 245 563 -22 2 685 312 282 26 0 chr17 13126098 13126176 -82146475 + B1_Mur1 SINE Alu 44 123 -26 2 685 550 191 34 115 chr17 13126208 13126302 -82146349 + B1_Mus2 SINE Alu 5 90 -57 2 685 1521 58 16 0 chr17 13126302 13126491 -82146160 + B2_Mm2 SINE B2 1 192 -3 2 685 550 191 34 115 chr17 13126491 13126544 -82146107 + B1_Mus2 SINE Alu 91 140 -7 2 685 417 206 0 0 chr17 13126567 13126664 -82145987 + (TA)n Simple_repeat Simple_repeat 1 97 0 2 685 429 236 61 38 chr17 13126699 13126831 -82145820 + RSINE1 SINE B4 1 135 -30 2 685 349 298 11 0 chr17 13127336 13127430 -82145221 + ID_B1 SINE B4 107 201 -23 2 685 245 116 551 0 chr17 13127902 13127971 -82144680 + URR1A DNA MER1_type 3 109 -117 2 685 508 133 62 0 chr17 13128029 13128157 -82144494 + RLTR19 LTR ERVK 12 181 -318 2 685 1474 58 26 0 chr17 13128270 13128459 -82144192 - B2_Mm2 SINE B2 0 195 2 2 685 2006 124 47 199 chr17 13129210 13129585 -82143066 + RLTR11B LTR ERVK 1 348 -105 2 685 1172 47 0 13 chr17 13129585 13129735 -82142916 + B1_Mus1 SINE Alu 1 148 0 2 685 2006 124 47 199 chr17 13129735 13129893 -82142758 + RLTR11B LTR ERVK 349 453 0 2 685 776 100 0 0 chr17 13130012 13130122 -82142529 + B1_Mus1 SINE Alu 39 148 0 2 685 236 259 81 97 chr17 13130014 13130138 -82142513 + B4A SINE B4 125 246 -46 2 685 1125 83 0 0 chr17 13130157 13130301 -82142350 + B1_Mus1 SINE Alu 3 146 -2 2 685 285 284 0 102 chr17 13130548 13130646 -82142005 + ID_B1 SINE B4 84 171 -53 2 685 450 303 7 77 chr17 13130694 13130766 -82141885 + RSINE1 SINE B4 11 80 -85 2 685 449 17 17 0 chr17 13130766 13130824 -82141827 + (TG)n Simple_repeat Simple_repeat 1 59 0 2 685 450 303 7 77 chr17 13130824 13130894 -82141757 + RSINE1 SINE B4 81 143 -22 2 685 183 42 0 0 chr17 13130904 13130928 -82141723 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 2 685 221 298 18 0 chr17 13131053 13131110 -82141541 - ID4 SINE ID -1 82 25 2 685 367 281 9 0 chr17 13131152 13131266 -82141385 - PB1D10 SINE Alu -1 116 2 2 685 332 152 0 15 chr17 13131502 13131569 -82141082 + (TA)n Simple_repeat Simple_repeat 1 66 0 2 685 1074 97 14 0 chr17 13131665 13131809 -82140842 + B1_Mus1 SINE Alu 3 148 0 2 685 945 201 23 41 chr17 13131835 13132053 -82140598 + B3 SINE B2 1 214 -2 2 685 314 45 23 0 chr17 13133258 13133302 -82139349 + (CCCCG)n Simple_repeat Simple_repeat 5 49 0 2 685 260 342 0 0 chr17 13134039 13134115 -82138536 + (CA)n Simple_repeat Simple_repeat 1 76 0 2 685 676 198 18 77 chr17 13134143 13134313 -82138338 - B3 SINE B2 -6 210 51 2 685 387 0 0 0 chr17 13134324 13134367 -82138284 + (TC)n Simple_repeat Simple_repeat 1 43 0 2 685 434 303 30 8 chr17 13134367 13134500 -82138151 - B1_Mur1 SINE Alu -13 136 1 2 685 531 228 150 0 chr17 13135174 13135341 -82137310 + B3A SINE B2 1 192 -6 2 685 602 228 85 10 chr17 13135861 13136060 -82136591 - MTE2a LTR MaLR -10 369 156 2 685 575 239 71 14 chr17 13136296 13136436 -82136215 + B1_Mur2 SINE Alu 2 149 0 2 685 266 283 121 36 chr17 13137437 13137602 -82135049 + B3A SINE B2 4 182 -16 2 685 210 136 0 0 chr17 13137603 13137647 -82135004 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 685 309 125 0 0 chr17 13138124 13138172 -82134479 + HAL1-3A_ME LINE L1 1976 2023 -835 2 685 904 204 28 37 chr17 13138249 13138463 -82134188 - B3 SINE B2 -3 213 2 3 685 270 0 0 0 chr17 13138477 13138507 -82134144 + (T)n Simple_repeat Simple_repeat 1 30 0 3 685 993 39 0 0 chr17 13138507 13138637 -82134014 - B1_Mus2 SINE Alu 0 147 18 3 685 235 360 90 0 chr17 13138962 13139073 -82133578 + ID_B1 SINE B4 95 215 -9 3 685 345 204 136 0 chr17 13139588 13139691 -82132960 - B1_Mur1 SINE Alu -31 118 2 3 685 311 196 370 0 chr17 13139719 13139811 -82132840 - B1_Mur4 SINE Alu -22 128 3 3 685 1442 44 55 0 chr17 13139872 13140054 -82132597 + B2_Mm2 SINE B2 2 193 -2 3 685 376 287 11 0 chr17 13140750 13140844 -82131807 + B3A SINE B2 84 178 -20 3 685 450 234 29 7 chr17 13141084 13141222 -82131429 + B1F2 SINE Alu 1 141 -8 3 685 343 260 52 10 chr17 13141746 13141843 -82130808 + RSINE1 SINE B4 24 124 -41 3 685 21 36 0 0 chr17 13142071 13142099 -82130552 + AT_rich Low_complexity Low_complexity 1 28 0 3 685 466 255 131 18 chr17 13142101 13142269 -82130382 - B3A SINE B2 -10 188 2 3 685 312 27 0 0 chr17 13142496 13142533 -82130118 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 685 765 154 0 15 chr17 13142557 13142689 -82129962 - B3 SINE B2 -86 130 1 3 685 1428 84 11 0 chr17 13142766 13142957 -82129694 + B2_Mm1t SINE B2 1 193 0 3 685 531 231 71 43 chr17 13143012 13143152 -82129499 + B1_Mur4 SINE Alu 7 150 0 3 685 556 237 149 19 chr17 13143850 13144045 -82128606 - B3 SINE B2 -3 192 1 3 685 432 319 0 48 chr17 13144134 13144259 -82128392 - B1_Mus2 SINE Alu -28 119 1 3 685 616 265 26 11 chr17 13144284 13144489 -82128162 - B3A SINE B2 -1 215 11 3 685 547 265 66 6 chr17 13145657 13145824 -82126827 - B3A SINE B2 -18 180 4 3 685 1034 110 0 14 chr17 13146053 13146201 -82126450 - B1_Mus1 SINE Alu 0 148 3 3 685 315 230 120 0 chr17 13146554 13146654 -82125997 - PB1 SINE Alu -7 120 9 3 685 393 22 0 0 chr17 13146776 13146822 -82125829 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 685 447 255 228 28 chr17 13146867 13147117 -82125534 + RMER4B LTR ERVK 267 566 -19 3 685 312 282 26 0 chr17 13147479 13147557 -82125094 + B1_Mur1 SINE Alu 44 123 -26 3 685 550 191 34 115 chr17 13147589 13147683 -82124968 + B1_Mus2 SINE Alu 5 90 -57 3 685 1513 58 16 0 chr17 13147683 13147871 -82124780 + B2_Mm2 SINE B2 1 191 -4 3 685 550 191 34 115 chr17 13147871 13147924 -82124727 + B1_Mus2 SINE Alu 91 140 -7 3 685 483 209 0 0 chr17 13147947 13148062 -82124589 + (TA)n Simple_repeat Simple_repeat 1 115 0 3 685 426 228 62 39 chr17 13148100 13148228 -82124423 + RSINE1 SINE B4 5 135 -30 3 685 349 298 11 0 chr17 13148734 13148828 -82123823 + ID_B1 SINE B4 107 201 -23 3 685 661 185 206 52 chr17 13149300 13149408 -82123243 + URR1A DNA MER1_type 3 143 -83 3 685 1406 45 57 0 chr17 13149408 13149584 -82123067 - B2_Mm1a SINE B2 -6 187 2 3 685 661 185 206 52 chr17 13149584 13149669 -82122982 + URR1A DNA MER1_type 144 226 0 3 685 434 308 8 0 chr17 13150123 13150240 -82122411 + B1F SINE Alu 6 123 -26 3 685 316 267 0 51 chr17 13150242 13150321 -82122330 + B1F SINE Alu 68 142 -7 3 685 225 0 0 0 chr17 13150395 13150420 -82122231 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 3 685 653 65 0 0 chr17 13150929 13151022 -82121629 + B1_Mus2 SINE Alu 2 94 -53 3 685 309 239 0 157 chr17 13150933 13151067 -82121584 + MT2B LTR ERVL 170 282 -319 3 685 704 192 13 27 chr17 13151213 13151363 -82121288 - B1_Mur4 SINE Alu 0 150 3 3 685 531 305 49 39 chr17 13151365 13151405 -82121246 - B3 SINE B2 -9 207 162 3 685 183 42 0 0 chr17 13151405 13151429 -82121222 + (TATG)n Simple_repeat Simple_repeat 4 27 0 3 685 531 305 49 39 chr17 13151429 13151593 -82121058 - B3 SINE B2 -55 161 1 3 685 234 0 0 0 chr17 13152073 13152099 -82120552 + (TA)n Simple_repeat Simple_repeat 1 26 0 3 685 240 236 0 0 chr17 13152300 13152355 -82120296 - tRNA-Ala-GCY_ tRNA tRNA -20 55 1 3 685 600 53 0 0 chr17 13154553 13154629 -82118022 + (TCC)n Simple_repeat Simple_repeat 3 78 0 3 685 1242 41 0 0 chr17 13154629 13154776 -82117875 - B1_Mm SINE Alu 0 147 1 3 685 757 239 60 20 chr17 13154782 13154983 -82117668 - B3 SINE B2 -6 210 2 3 685 190 233 0 0 chr17 13155295 13155338 -82117313 + L2c LINE L2 3120 3162 -225 3 685 198 103 0 0 chr17 13155396 13155425 -82117226 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 3 685 1194 54 0 0 chr17 13155430 13155577 -82117074 - B1_Mus1 SINE Alu -1 147 1 3 685 298 320 63 55 chr17 13156391 13156629 -82116022 + B4 SINE B4 1 240 -52 3 685 541 289 0 0 chr17 13156617 13156745 -82115906 - B3 SINE B2 -64 152 25 3 685 309 247 67 0 chr17 13157024 13157113 -82115538 - ORR1D2 LTR MaLR -67 303 209 3 685 1512 58 21 0 chr17 13157204 13157392 -82115259 - B2_Mm1a SINE B2 0 193 2 3 685 930 145 21 0 chr17 13157394 13157539 -82115112 - B1_Mus1 SINE Alu 0 148 1 3 685 573 209 83 30 chr17 13157545 13157678 -82114973 - B1_Mur1 SINE Alu -7 142 3 3 685 1486 54 11 0 chr17 13157678 13157863 -82114788 - B2_Mm1t SINE B2 -6 187 1 3 685 596 246 121 17 chr17 13157873 13158047 -82114604 - B3A SINE B2 -6 192 1 3 685 1040 80 13 0 chr17 13158705 13158855 -82113796 - B2_Mm2 SINE B2 -42 153 2 3 685 348 103 0 0 chr17 13160172 13160230 -82112421 + (A)n Simple_repeat Simple_repeat 1 58 0 3 685 791 67 83 0 chr17 13160953 13161073 -82111578 - B1_Mus1 SINE Alu 0 148 19 3 685 183 80 0 0 chr17 13161073 13161098 -82111553 + (CCA)n Simple_repeat Simple_repeat 2 26 0 3 685 402 252 153 8 chr17 13161158 13161282 -82111369 - B4A SINE B4 -2 290 149 3 685 242 368 69 0 chr17 13163017 13163104 -82109547 - PB1D10 SINE Alu -21 96 4 3 685 640 108 144 0 chr17 13163953 13164064 -82108587 + B1_Mus2 SINE Alu 21 147 0 3 685 334 260 13 13 chr17 13164631 13164709 -82107942 + ID4_ SINE ID 3 80 -3 3 685 23 0 0 0 chr17 13164774 13164797 -82107854 + AT_rich Low_complexity Low_complexity 1 23 0 3 685 851 221 71 15 chr17 13164797 13164995 -82107656 + B3 SINE B2 1 209 -7 3 685 833 231 56 5 chr17 13165045 13165241 -82107410 - B3 SINE B2 -10 206 1 3 685 248 261 43 0 chr17 13165248 13165317 -82107334 - PB1D9 SINE Alu -21 99 28 3 685 310 203 0 0 chr17 13165616 13165675 -82106976 - B1F SINE Alu -90 59 1 3 685 238 268 0 0 chr17 13168569 13168625 -82104026 - MurSatRep1 Unknown Unknown -1853 284 229 3 685 236 321 0 12 chr17 13168686 13168768 -82103883 + ID4 SINE ID 3 83 0 3 685 554 154 75 19 chr17 13168883 13168989 -82103662 + PB1D9 SINE Alu 5 116 -4 3 685 219 69 0 0 chr17 13168992 13169021 -82103630 + (CAAAC)n Simple_repeat Simple_repeat 4 32 0 3 685 461 219 335 0 chr17 13169059 13169214 -82103437 + B3 SINE B2 1 207 -9 3 685 216 67 0 0 chr17 13169216 13169246 -82103405 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 3 685 235 276 32 84 chr17 13169246 13169341 -82103310 + B3A SINE B2 29 118 -80 3 685 357 224 13 26 chr17 13169471 13169549 -82103102 + B1_Mur2 SINE Alu 73 149 0 3 685 219 36 0 0 chr17 13169764 13169792 -82102859 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 3 685 219 36 0 0 chr17 13169934 13169962 -82102689 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 3 685 794 47 0 0 chr17 13169964 13170070 -82102581 - B1_Mus1 SINE Alu -13 135 30 3 685 416 251 45 147 chr17 13170070 13170188 -82102463 - B4 SINE B4 -79 213 13 3 685 305 183 33 0 chr17 13170347 13170407 -82102244 - PB1D9 SINE Alu -2 118 57 3 685 366 234 137 60 chr17 13170456 13170638 -82102013 - B3A SINE B2 -2 196 1 3 685 1085 77 28 0 chr17 13170759 13170902 -82101749 - B1_Mus1 SINE Alu 0 148 2 3 685 643 267 15 0 chr17 13171117 13171252 -82101399 + RSINE1 SINE B4 3 139 -26 3 685 21 57 0 0 chr17 13171261 13171296 -82101355 + AT_rich Low_complexity Low_complexity 1 35 0 3 685 473 286 67 0 chr17 13171301 13171420 -82101231 + RSINE1 SINE B4 3 129 -36 3 685 368 249 187 50 chr17 13171501 13171683 -82100968 - B4 SINE B4 -36 256 50 3 685 555 217 93 0 chr17 13171887 13172016 -82100635 + B1_Mus2 SINE Alu 6 146 -1 3 685 811 248 44 5 chr17 13172030 13172233 -82100418 - B3 SINE B2 -3 213 3 3 685 642 231 13 13 chr17 13172528 13172677 -82099974 + B1_Mur1 SINE Alu 1 149 0 3 685 723 216 119 0 chr17 13172903 13173084 -82099567 + B3 SINE B2 16 216 0 3 685 207 0 0 0 chr17 13173112 13173135 -82099516 + (TAGA)n Simple_repeat Simple_repeat 4 26 0 3 685 1270 20 0 0 chr17 13173362 13173509 -82099142 + B1_Mus2 SINE Alu 1 147 0 3 685 342 100 0 0 chr17 13173512 13173572 -82099079 + (A)n Simple_repeat Simple_repeat 1 60 0 3 685 358 159 21 54 chr17 13174134 13174213 -82098438 + PB1D10 SINE Alu 28 106 -11 3 685 789 164 71 0 chr17 13174213 13174353 -82098298 + B1_Mur4 SINE Alu 1 150 0 3 685 358 159 21 54 chr17 13174353 13174366 -82098285 + PB1D10 SINE Alu 107 116 -1 3 685 189 0 0 0 chr17 13174413 13174434 -82098217 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 3 685 870 34 0 17 chr17 13174438 13174557 -82098094 + B1_Mus2 SINE Alu 31 147 0 3 685 388 184 284 0 chr17 13174963 13175072 -82097579 + B1_Mus1 SINE Alu 3 142 -6 3 685 234 128 0 0 chr17 13175076 13175115 -82097536 + (TGGGGG)n Simple_repeat Simple_repeat 3 41 0 4 685 228 301 157 0 chr17 13175173 13175256 -82097395 + PB1D10 SINE Alu 19 114 -3 4 685 1599 27 16 0 chr17 13175269 13175455 -82097196 - B2_Mm1a SINE B2 -4 189 1 4 685 232 386 50 50 chr17 13175487 13175648 -82097003 - RSINE1 SINE B4 -4 161 1 4 685 242 163 61 0 chr17 13175967 13176016 -82096635 + B1_Mus2 SINE Alu 96 147 0 4 685 260 236 189 11 chr17 13176123 13176213 -82096438 + PB1D10 SINE Alu 9 114 -3 4 685 398 250 53 18 chr17 13176474 13176588 -82096063 + B3A SINE B2 3 120 -78 4 685 488 231 20 9 chr17 13176755 13176889 -82095762 + B1_Mur3 SINE Alu 14 149 0 4 685 1322 95 21 5 chr17 13177306 13177497 -82095154 + B2_Mm2 SINE B2 2 195 0 4 685 200 35 35 0 chr17 13177497 13177526 -82095125 + (GAAA)n Simple_repeat Simple_repeat 4 33 0 4 685 180 0 0 0 chr17 13177529 13177549 -82095102 + (CATG)n Simple_repeat Simple_repeat 4 23 0 4 685 1187 96 45 6 chr17 13177586 13177765 -82094886 - B2_Mm2 SINE B2 -9 186 1 4 685 1138 76 0 0 chr17 13177820 13177965 -82094686 + B1_Mus1 SINE Alu 2 146 -2 4 685 243 0 0 0 chr17 13177965 13177992 -82094659 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 4 685 1054 57 35 14 chr17 13179531 13179674 -82092977 + B1_Mus2 SINE Alu 2 147 0 4 685 183 42 0 0 chr17 13179685 13179709 -82092942 + (CAA)n Simple_repeat Simple_repeat 2 25 0 4 685 529 221 207 6 chr17 13179720 13179884 -82092767 + B3A SINE B2 2 198 0 4 685 612 95 11 0 chr17 13179890 13179985 -82092666 + B2_Mm2 SINE B2 1 96 -99 4 685 491 239 85 0 chr17 13180193 13180323 -82092328 + B1_Mur2 SINE Alu 1 141 -8 4 685 1243 41 0 0 chr17 13180349 13180496 -82092155 + B1_Mm SINE Alu 1 147 0 4 685 1109 75 14 0 chr17 13180772 13180919 -82091732 + B1_Mur4 SINE Alu 2 150 0 4 685 240 143 243 54 chr17 13180962 13181036 -82091615 + B1F2 SINE Alu 33 120 -29 4 685 1344 77 21 21 chr17 13181045 13181232 -82091419 + B2_Mm2 SINE B2 5 191 -4 4 685 1157 62 0 7 chr17 13181238 13181385 -82091266 + B1_Mus2 SINE Alu 2 147 0 4 685 208 127 18 18 chr17 13181385 13181441 -82091210 + A-rich Low_complexity Low_complexity 2 57 0 4 685 845 203 85 5 chr17 13181498 13181686 -82090965 + B3 SINE B2 4 206 -10 4 685 211 204 20 0 chr17 13182024 13182073 -82090578 + MIRm SINE MIR 98 147 -129 4 685 1185 34 7 7 chr17 13182505 13182651 -82090000 + B1_Mm SINE Alu 2 147 0 4 685 1337 80 42 11 chr17 13182653 13182812 -82089839 + B2_Mm2 SINE B2 1 158 -37 4 685 207 0 0 0 chr17 13182812 13182835 -82089816 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 4 685 1337 80 42 11 chr17 13182835 13182864 -82089787 + B2_Mm2 SINE B2 159 195 0 4 685 2640 65 37 24 chr17 13182870 13183248 -82089403 + L1Md_F2 LINE L1 6200 6582 0 4 685 1068 103 23 6 chr17 13183557 13183732 -82088919 - B2_Mm2 SINE B2 -10 185 8 4 685 472 223 248 25 chr17 13183756 13183917 -82088734 - B3 SINE B2 -19 197 1 4 685 28 0 0 0 chr17 13184988 13185016 -82087635 + GC_rich Low_complexity Low_complexity 1 28 0 4 685 32 67 0 0 chr17 13185090 13185150 -82087501 + GC_rich Low_complexity Low_complexity 1 60 0 4 685 844 210 72 0 chr17 13186673 13186840 -82085811 + B3 SINE B2 1 179 -37 4 685 2894 93 12 2 chr17 13186850 13187279 -82085372 - MT2C_Mm LTR ERVL 0 475 43 4 685 404 194 104 31 chr17 13187275 13187371 -82085280 + MT2A LTR ERVL 21 123 -410 4 685 1202 36 0 0 chr17 13187455 13187593 -82085058 - B1_Mus1 SINE Alu -9 139 2 4 685 757 117 0 0 chr17 13187601 13187704 -82084947 - MERVL_2A-int LTR ERVL -3387 2374 2272 4 685 913 178 81 146 chr17 13187713 13187812 -82084839 + ORR1A2 LTR MaLR 41 158 -236 4 685 969 83 13 70 chr17 13187812 13187968 -82084683 + B1_Mus1 SINE Alu 2 148 0 4 685 1356 86 17 45 chr17 13187968 13188203 -82084448 + ORR1A2 LTR MaLR 94 353 -41 4 685 1719 71 13 0 chr17 13188203 13188428 -82084223 - L1_Mus1 LINE L1 -262 6305 6078 4 685 2197 38 0 0 chr17 13188428 13188689 -82083962 + L1_Mus1 LINE L1 6307 6567 0 4 685 451 18 0 0 chr17 13188689 13188744 -82083907 + ORR1A2 LTR MaLR 272 326 0 4 685 2044 168 88 3 chr17 13188777 13189142 -82083509 - MERVL_2A-int LTR ERVL -3783 1978 1583 4 685 460 246 178 49 chr17 13189995 13190177 -82082474 + B4 SINE B4 8 224 -68 4 685 1164 103 80 0 chr17 13190177 13190352 -82082299 - B2_Mm2 SINE B2 -6 189 1 4 685 305 238 131 56 chr17 13190352 13190425 -82082226 + B4A SINE B4 225 291 -1 4 685 249 261 14 0 chr17 13190673 13190742 -82081909 + B1F2 SINE Alu 2 71 -78 4 685 1264 110 20 106 chr17 13191270 13191515 -82081136 + Lx4A LINE L1 6835 7058 0 4 685 1044 64 0 60 chr17 13191736 13191886 -82080765 - B1_Mm SINE Alu -5 142 2 4 685 1100 198 129 50 chr17 13191964 13192267 -82080384 + RMER16 LTR ERVK 124 450 -83 4 685 1239 232 126 95 chr17 13192279 13192826 -82079825 + ETnERV2-int LTR ERVK 2176 2692 -4714 4 685 6432 84 35 15 chr17 13192844 13193848 -82078803 + MT-int LTR MaLR 1 1024 -74 4 685 14564 85 18 27 chr17 13193855 13194689 -82077962 + RMER16-int LTR ERVK 2016 2862 -2544 4 685 225 65 0 0 chr17 13194689 13194720 -82077931 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 685 14564 85 18 27 chr17 13194720 13194984 -82077667 + RMER16-int LTR ERVK 2863 3107 -2299 4 685 1047 109 0 0 chr17 13194984 13195131 -82077520 - B1_Mus2 SINE Alu 0 147 1 4 685 14564 85 18 27 chr17 13195131 13195239 -82077412 + RMER16-int LTR ERVK 3108 3208 -2198 4 685 1293 107 11 5 chr17 13195239 13195427 -82077224 - B2_Mm1t SINE B2 -4 189 1 4 685 14564 85 18 27 chr17 13195427 13196295 -82076356 + RMER16-int LTR ERVK 3209 4071 -1335 4 685 884 42 34 0 chr17 13196295 13196414 -82076237 + B1_Mus1 SINE Alu 26 148 0 4 685 195 114 0 0 chr17 13196434 13196469 -82076182 + (CAA)n Simple_repeat Simple_repeat 2 36 0 4 685 388 138 35 81 chr17 13196523 13196610 -82076041 + RMER16-int LTR ERVK 4352 4434 -972 4 685 513 0 0 0 chr17 13197062 13197119 -82075532 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 685 396 0 0 0 chr17 13197119 13197162 -82075489 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 685 538 53 94 10 chr17 13197428 13197524 -82075127 + ORR1A0 LTR MaLR 1 104 -242 4 685 11106 50 21 30 chr17 13197523 13198457 -82074194 + ORR1A0-int LTR MaLR 83 1010 -782 4 685 1245 41 0 0 chr17 13198457 13198604 -82074047 - B1_Mm SINE Alu 0 147 1 4 685 11106 50 21 30 chr17 13198604 13199319 -82073332 + ORR1A0-int LTR MaLR 1011 1717 -75 4 685 1007 92 0 0 chr17 13199337 13199479 -82073172 - B1_Mm SINE Alu 0 147 6 4 685 604 12 0 24 chr17 13199485 13199568 -82073083 + ORR1A0-int LTR MaLR 1711 1791 -1 4 685 2945 44 0 0 chr17 13199571 13199915 -82072736 + ORR1A0 LTR MaLR 3 346 0 4 685 360 0 0 0 chr17 13202136 13202176 -82070475 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 685 333 253 58 0 chr17 13202194 13202281 -82070370 - RSINE1 SINE B4 -25 140 49 4 685 202 29 28 28 chr17 13202378 13202414 -82070237 + (TTA)n Simple_repeat Simple_repeat 1 36 0 4 685 1078 84 0 25 chr17 13202445 13202604 -82070047 - B2_Mm2 SINE B2 -40 155 1 4 685 965 120 79 17 chr17 13202745 13202923 -82069728 - B2_Mm2 SINE B2 0 195 7 4 685 1398 68 5 68 chr17 13203556 13203761 -82068890 - B2_Mm1t SINE B2 -1 192 1 4 685 24 53 0 0 chr17 13203888 13203926 -82068725 + AT_rich Low_complexity Low_complexity 1 38 0 4 685 261 0 0 0 chr17 13204137 13204166 -82068485 + (TC)n Simple_repeat Simple_repeat 2 30 0 4 685 216 0 0 0 chr17 13204206 13204230 -82068421 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 685 244 200 73 0 chr17 13204572 13204627 -82068024 + B3A SINE B2 2 60 -138 4 685 1072 101 0 17 chr17 13204655 13204827 -82067824 + B2_Mm2 SINE B2 27 195 0 4 685 234 237 49 62 chr17 13205072 13205153 -82067498 - ID2 SINE ID 0 83 4 4 685 342 152 0 0 chr17 13205289 13205348 -82067303 + CT-rich Low_complexity Low_complexity 3 61 0 4 685 1193 48 0 7 chr17 13205517 13205665 -82066986 - B1_Mm SINE Alu 0 147 1 4 685 302 250 0 0 chr17 13205701 13205769 -82066882 + ID_B1 SINE B4 86 153 -71 4 685 249 250 12 50 chr17 13205769 13205781 -82066870 + PB1 SINE Alu 5 81 -46 4 685 338 221 26 0 chr17 13208568 13208645 -82064006 + ID4 SINE ID 3 81 -2 4 685 418 229 154 66 chr17 13209333 13209515 -82063136 - B3A SINE B2 0 198 1 4 685 24 0 0 0 chr17 13209518 13209542 -82063109 + AT_rich Low_complexity Low_complexity 1 24 0 4 685 1140 75 0 0 chr17 13209599 13209746 -82062905 - B1_Mus2 SINE Alu 0 147 1 4 685 1285 97 37 16 chr17 13209747 13209935 -82062716 - B2_Mm2 SINE B2 -1 194 3 4 685 589 160 8 31 chr17 13209962 13210091 -82062560 - Lx7 LINE L1 -4 7692 7567 4 685 286 375 53 13 chr17 13211197 13211424 -82061227 - MIR SINE MIR -19 243 8 4 685 536 226 39 46 chr17 13211492 13211622 -82061029 - RSINE1 SINE B4 0 165 37 4 685 229 176 0 38 chr17 13211575 13211628 -82061023 - B2_Mm2 SINE B2 -112 83 33 4 685 781 240 99 88 chr17 13212344 13212381 -82060270 - MER44B DNA MER2_type -43 507 474 4 685 255 61 0 0 chr17 13212381 13212414 -82060237 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 685 781 240 99 88 chr17 13212414 13212719 -82059932 - MER44B DNA MER2_type -77 473 161 4 685 522 295 77 98 chr17 13212745 13212812 -82059839 + B4A SINE B4 2 64 -228 4 685 1544 63 0 0 chr17 13212812 13213003 -82059648 + B2_Mm1a SINE B2 2 192 -1 4 685 522 295 77 98 chr17 13213003 13213232 -82059419 + B4A SINE B4 65 292 0 4 685 399 41 0 0 chr17 13213260 13213309 -82059342 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 685 1730 114 28 61 chr17 13213541 13213867 -82058784 - ORR1A4 LTR MaLR -8 321 7 4 685 225 0 0 0 chr17 13213884 13213909 -82058742 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 685 25 31 0 0 chr17 13213969 13214001 -82058650 + AT_rich Low_complexity Low_complexity 1 32 0 4 685 297 230 14 0 chr17 13216941 13217015 -82055636 + ORR1B1 LTR MaLR 319 393 -1 4 685 577 275 68 100 chr17 13217028 13217150 -82055501 + L1M2 LINE L1 4214 4337 -1803 4 685 704 156 52 90 chr17 13217150 13217305 -82055346 + B1_Mur4 SINE Alu 1 149 -1 4 685 577 275 68 100 chr17 13217305 13217671 -82054980 + L1M2 LINE L1 4338 4686 -1454 4 685 734 296 143 44 chr17 13217839 13218879 -82053772 + L1M2 LINE L1 4677 5788 -92 4 685 2155 146 8 3 chr17 13219021 13219379 -82053272 + RLTR14 LTR ERV1 1 360 -22 4 685 2992 172 17 65 chr17 13219444 13220078 -82052573 + RLTR18 LTR ERVK 4 607 -9 4 685 1416 193 123 19 chr17 13220120 13220495 -82052156 + RMER5 LTR ERV1 121 534 0 5 685 711 208 129 18 chr17 13221223 13221434 -82051217 - ORR1E LTR MaLR -138 232 6 5 685 282 285 91 42 chr17 13222498 13222641 -82050010 - MER45B DNA Tip100 -838 202 53 5 685 1950 194 58 5 chr17 13222713 13223112 -82049539 + MTC LTR MaLR 1 420 -1 5 685 698 210 73 31 chr17 13223215 13223407 -82049244 - Lx5 LINE L1 0 7050 6851 5 685 575 237 96 0 chr17 13223393 13223549 -82049102 + Lx5 LINE L1 6565 6735 -315 5 685 249 302 68 68 chr17 13223557 13223660 -82048991 + RSINE1 SINE B4 50 152 -13 5 685 189 0 0 0 chr17 13223663 13223684 -82048967 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 685 1525 146 8 23 chr17 13223689 13223948 -82048703 - ORR1A4 LTR MaLR -8 321 67 5 685 282 349 47 10 chr17 13224050 13224174 -82048477 - AluG_3 SINE Alu -97 214 4 5 685 2611 59 9 12 chr17 13224418 13224746 -82047905 - ORR1A2 LTR MaLR 0 327 1 5 685 2915 154 18 2 chr17 13226197 13226690 -82045961 + Lx4A LINE L1 6487 6987 -71 5 685 546 326 0 20 chr17 13228370 13228492 -82044159 + B4A SINE B4 149 270 -22 5 685 321 26 0 0 chr17 13228492 13228530 -82044121 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 685 546 326 0 20 chr17 13228530 13228554 -82044097 + B4A SINE B4 271 292 0 5 685 271 255 0 0 chr17 13228626 13228673 -82043978 - ID4_ SINE ID -9 74 28 5 685 210 171 0 0 chr17 13228673 13228714 -82043937 + CT-rich Low_complexity Low_complexity 2 42 0 5 685 1080 76 14 20 chr17 13228720 13228868 -82043783 - B1_Mus1 SINE Alu -1 147 1 5 685 391 314 0 28 chr17 13228951 13229059 -82043592 + ID_B1 SINE B4 81 185 -39 5 685 549 226 9 54 chr17 13228962 13229074 -82043577 + B1_Mur1 SINE Alu 11 117 -3 5 685 207 238 55 73 chr17 13229659 13229768 -82042883 + L3 LINE CR1 4362 4468 -21 5 685 243 0 0 0 chr17 13233103 13233130 -82039521 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 685 258 293 167 20 chr17 13234489 13234639 -82038012 - LTR40a LTR ERVL 0 519 348 5 685 225 309 0 0 chr17 13234753 13234808 -82037843 - LTR40a LTR ERVL -400 119 65 5 685 529 248 8 0 chr17 13235597 13235718 -82036933 + PB1 SINE Alu 1 122 -5 5 685 262 278 0 0 chr17 13236363 13236426 -82036225 + B1F SINE Alu 55 149 0 5 685 195 42 0 0 chr17 13236676 13236700 -82035951 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 5 685 221 57 0 28 chr17 13236734 13236770 -82035881 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 685 21 0 0 0 chr17 13237679 13237700 -82034951 + AT_rich Low_complexity Low_complexity 1 21 0 5 686 322 282 13 0 chr17 13238790 13238868 -82033783 - ID4 SINE ID -4 79 1 5 686 1153 301 42 17 chr17 13239544 13239953 -82032698 - MTD LTR MaLR 0 419 1 5 686 337 344 59 18 chr17 13239953 13240174 -82032477 + MLT1A LTR MaLR 145 374 0 5 686 528 305 128 12 chr17 13240330 13240675 -82031976 + L1MB3 LINE L1 5498 5882 -301 5 686 311 161 192 13 chr17 13241050 13241134 -82031517 - MTD LTR MaLR -226 193 66 5 686 270 0 0 0 chr17 13245828 13245858 -82026793 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 686 2575 152 112 2 chr17 13246439 13246507 -82026144 - RLTR11A LTR ERVK -1 527 459 5 686 1422 50 0 0 chr17 13246507 13246686 -82025965 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 686 2575 152 112 2 chr17 13246686 13247092 -82025559 - RLTR11A LTR ERVK -70 458 2 5 686 409 271 76 8 chr17 13247308 13247427 -82025224 + B1F SINE Alu 23 149 0 5 686 259 309 0 12 chr17 13247427 13247509 -82025142 + GA-rich Low_complexity Low_complexity 2 82 0 5 686 567 153 0 0 chr17 13248398 13248496 -82024155 + (CAT)n Simple_repeat Simple_repeat 2 99 0 5 686 344 290 33 70 chr17 13248693 13248908 -82023743 - RLTR42-int LTR ERVK -4122 1400 1194 5 686 190 289 53 53 chr17 13249228 13249323 -82023328 - L4 LINE RTE -1574 455 361 5 686 1118 129 110 38 chr17 13250370 13250579 -82022072 - URR1A DNA MER1_type 0 226 3 5 686 198 0 0 0 chr17 13251274 13251296 -82021355 + (T)n Simple_repeat Simple_repeat 1 22 0 5 686 932 223 64 101 chr17 13251315 13251633 -82021018 + MT2B LTR ERVL 238 548 -53 5 686 228 67 0 0 chr17 13251633 13251663 -82020988 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 686 932 223 64 101 chr17 13251663 13251689 -82020962 + MT2B LTR ERVL 549 569 -32 5 686 416 245 0 7 chr17 13251697 13251841 -82020810 + (TG)n Simple_repeat Simple_repeat 2 144 0 5 686 765 156 35 0 chr17 13251843 13252016 -82020635 + (TATG)n Simple_repeat Simple_repeat 1 179 0 5 686 183 80 0 0 chr17 13252028 13252053 -82020598 + (TATG)n Simple_repeat Simple_repeat 2 26 0 5 686 233 196 0 0 chr17 13252053 13252099 -82020552 + MT2A LTR ERVL 488 533 0 5 686 531 0 0 0 chr17 13255495 13255554 -82017097 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 686 331 145 29 0 chr17 13256847 13256916 -82015735 + CT-rich Low_complexity Low_complexity 1 71 0 5 686 3318 248 92 14 chr17 13256916 13257883 -82014768 + Lx7 LINE L1 6175 7216 -480 5 686 284 270 0 28 chr17 13257994 13258040 -82014611 + T-rich Low_complexity Low_complexity 97 141 0 5 686 282 56 0 0 chr17 13258040 13258076 -82014575 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 686 284 270 0 28 chr17 13258076 13258170 -82014481 + T-rich Low_complexity Low_complexity 6 96 0 5 686 519 17 0 0 chr17 13258171 13258231 -82014420 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 5 686 227 207 0 17 chr17 13258249 13258308 -82014343 + Lx7 LINE L1 7611 7668 -28 5 686 195 177 32 16 chr17 13259297 13259360 -82013291 + CT-rich Low_complexity Low_complexity 4 67 0 5 686 991 117 22 0 chr17 13259401 13259667 -82012984 + (TATG)n Simple_repeat Simple_repeat 1 271 0 5 686 364 101 58 0 chr17 13259679 13259748 -82012903 + (TATG)n Simple_repeat Simple_repeat 2 74 0 5 686 612 287 21 22 chr17 13259773 13259953 -82012698 - B3A SINE B2 -9 186 1 5 686 233 250 31 83 chr17 13260009 13260105 -82012546 - B3A SINE B2 -80 118 28 5 686 298 289 33 0 chr17 13260041 13260131 -82012520 - B4A SINE B4 -199 93 1 5 686 366 42 0 0 chr17 13261166 13261214 -82011437 + (TCTG)n Simple_repeat Simple_repeat 1 48 0 5 686 491 269 337 4 chr17 13261242 13261497 -82011154 - ORR1D2 LTR MaLR 0 370 31 5 686 245 188 0 20 chr17 13261507 13261556 -82011095 + MTD LTR MaLR 1 48 -331 5 686 216 0 0 0 chr17 13261572 13261596 -82011055 + (T)n Simple_repeat Simple_repeat 1 24 0 5 686 2239 44 0 11 chr17 13261613 13261889 -82010762 - L1Md_F2 LINE L1 0 6582 6310 5 686 413 342 11 83 chr17 13261891 13262067 -82010584 + MTD LTR MaLR 66 225 -196 5 686 285 29 0 0 chr17 13262067 13262101 -82010550 + (GA)n Simple_repeat Simple_repeat 2 35 0 5 686 458 184 0 17 chr17 13264269 13264385 -82008266 + CT-rich Low_complexity Low_complexity 3 116 0 5 686 359 298 65 23 chr17 13264398 13264651 -82008000 - HAL1-3A_ME LINE L1 -419 2439 2284 5 686 217 255 0 0 chr17 13264654 13264701 -82007950 + CT-rich Low_complexity Low_complexity 2 48 0 5 686 682 200 182 0 chr17 13264713 13264883 -82007768 - ID_B1 SINE B4 -19 205 5 5 686 25 65 0 0 chr17 13265237 13265283 -82007368 + AT_rich Low_complexity Low_complexity 1 46 0 5 686 621 154 0 0 chr17 13266100 13266210 -82006441 + (TG)n Simple_repeat Simple_repeat 1 110 0 5 686 1476 212 122 24 chr17 13267232 13267611 -82005040 - MTD LTR MaLR -14 405 2 5 686 21 0 0 0 chr17 13267838 13267859 -82004792 + AT_rich Low_complexity Low_complexity 1 21 0 5 686 377 304 73 58 chr17 13269327 13269430 -82003221 - L1MEd LINE L1 -5454 665 563 5 686 3809 63 27 0 chr17 13269430 13269905 -82002746 - L1Md_F2 LINE L1 -1 6581 6094 5 686 377 304 73 58 chr17 13269905 13270007 -82002644 - L1MEd LINE L1 -5557 562 457 5 686 694 31 21 0 chr17 13270330 13270427 -82002224 + (TG)n Simple_repeat Simple_repeat 1 99 0 5 686 1267 240 145 23 chr17 13271085 13271555 -82001096 + RLTR11A2 LTR ERVK 1 527 0 5 686 656 282 82 27 chr17 13272053 13272272 -82000379 - MTEa LTR MaLR 0 379 149 5 686 261 376 21 28 chr17 13272263 13272408 -82000243 - Tigger5 DNA MER2_type -2224 182 39 5 686 1008 225 33 9 chr17 13273210 13273421 -81999230 + B3 SINE B2 1 216 0 5 686 265 263 48 48 chr17 13275060 13275164 -81997487 + L1MA7 LINE L1 6183 6286 -5 5 686 195 26 24 71 chr17 13275374 13275416 -81997235 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 5 686 3096 172 80 33 chr17 13276173 13276915 -81995736 - MTC-int LTR MaLR -3 1255 377 5 686 36827 30 1 0 chr17 13276924 13283718 -81988933 - L1Md_T LINE L1 0 6585 1 5 686 1624 149 160 20 chr17 13283718 13284075 -81988576 - MTC-int LTR MaLR -850 408 2 5 686 2722 124 27 5 chr17 13284078 13284482 -81988169 - MTC LTR MaLR -8 413 1 5 686 219 235 39 0 chr17 13285629 13285680 -81986971 + (CATA)n Simple_repeat Simple_repeat 2 54 0 5 686 455 329 99 88 chr17 13285684 13286027 -81986624 + ORR1E LTR MaLR 10 356 -3 5 686 263 266 12 0 chr17 13286115 13286210 -81986441 - L1M3a LINE L1 -4692 1621 1540 5 686 286 256 21 43 chr17 13287685 13287779 -81984872 - L1M3a LINE L1 -5788 515 424 5 686 180 0 0 0 chr17 13287829 13287849 -81984802 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 686 311 336 17 34 chr17 13287885 13288002 -81984649 - L1MB7 LINE L1 -87 6097 5983 5 686 1107 253 161 13 chr17 13288036 13288352 -81984299 + MTE2b LTR MaLR 2 364 -15 5 686 501 68 0 0 chr17 13288675 13288749 -81983902 + (TG)n Simple_repeat Simple_repeat 1 74 0 5 686 802 256 71 56 chr17 13288772 13289041 -81983610 - B4 SINE B4 -19 273 1 5 686 1115 58 0 0 chr17 13289065 13289202 -81983449 + B1_Mus1 SINE Alu 6 142 -6 5 686 236 30 30 0 chr17 13289204 13289237 -81983414 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 5 686 727 239 277 9 chr17 13291458 13291678 -81980973 + B4A SINE B4 1 279 -13 5 686 391 174 34 20 chr17 13291968 13292115 -81980536 + (TG)n Simple_repeat Simple_repeat 2 150 0 5 686 513 171 29 23 chr17 13292120 13292294 -81980357 + (TATG)n Simple_repeat Simple_repeat 4 178 0 5 686 313 182 27 27 chr17 13292307 13292454 -81980197 + (TG)n Simple_repeat Simple_repeat 2 148 0 5 686 433 244 6 6 chr17 13293994 13294155 -81978496 + (TG)n Simple_repeat Simple_repeat 2 162 0 5 686 313 244 17 17 chr17 13294128 13294245 -81978406 + (TATATG)n Simple_repeat Simple_repeat 6 122 0 5 686 676 281 44 67 chr17 13294288 13294585 -81978066 - B4A SINE B4 -2 290 1 5 686 246 291 18 65 chr17 13294881 13294994 -81977657 + G-rich Low_complexity Low_complexity 4 110 0 6 686 242 56 0 27 chr17 13294994 13295031 -81977620 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 686 246 291 18 65 chr17 13295031 13295086 -81977565 + G-rich Low_complexity Low_complexity 111 164 0 6 686 436 250 16 32 chr17 13295757 13295881 -81976770 + MTEb LTR MaLR 240 361 -18 6 686 673 172 62 8 chr17 13297280 13297409 -81975242 - B1_Mur2 SINE Alu 0 149 14 6 686 251 281 84 99 chr17 13297283 13297425 -81975226 - B4A SINE B4 -68 224 85 6 686 319 259 156 65 chr17 13297841 13298027 -81974624 - ORR1E LTR MaLR -80 279 77 6 686 29 28 0 0 chr17 13299230 13299266 -81973385 + AT_rich Low_complexity Low_complexity 1 36 0 6 686 188 261 0 61 chr17 13300556 13300605 -81972046 + L3b LINE CR1 192 237 -245 6 686 327 25 0 0 chr17 13301763 13301803 -81970848 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 686 695 328 22 48 chr17 13301805 13301992 -81970659 - B4A SINE B4 -29 263 85 6 686 596 37 24 0 chr17 13301992 13302074 -81970577 + (CAAAA)n Simple_repeat Simple_repeat 2 85 0 6 686 695 328 22 48 chr17 13302074 13302155 -81970496 - B4A SINE B4 -208 84 3 6 686 843 275 162 0 chr17 13302765 13303012 -81969639 + B4A SINE B4 2 288 -4 6 686 211 208 21 0 chr17 13303061 13303109 -81969542 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 686 627 190 0 0 chr17 13303868 13304005 -81968646 + (TG)n Simple_repeat Simple_repeat 2 138 0 6 686 408 374 45 4 chr17 13304972 13305238 -81967413 + L1MD3 LINE L1 7719 7995 0 6 686 549 269 194 20 chr17 13305742 13305989 -81966662 - B4A SINE B4 -2 290 1 6 686 270 0 0 0 chr17 13306320 13306350 -81966301 + (TG)n Simple_repeat Simple_repeat 2 31 0 6 686 486 0 0 0 chr17 13306761 13306815 -81965836 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 686 310 341 65 60 chr17 13312787 13312971 -81959680 + MER58A DNA MER1_type 4 188 -36 6 686 620 291 13 6 chr17 13313399 13313558 -81959093 - U1 snRNA snRNA -2 163 4 6 686 692 237 70 12 chr17 13313933 13314104 -81958547 + B3 SINE B2 1 181 -35 6 686 441 0 0 0 chr17 13314111 13314160 -81958491 + (TC)n Simple_repeat Simple_repeat 1 49 0 6 686 396 0 0 0 chr17 13314160 13314203 -81958448 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 686 305 234 23 80 chr17 13314220 13314308 -81958343 + MTE2b LTR MaLR 16 98 -281 6 686 2469 131 64 80 chr17 13314877 13315391 -81957260 + RLTR28 LTR ERVL 1 506 -18 6 686 317 327 75 46 chr17 13317436 13317609 -81955042 + HAL1-3A_ME LINE L1 2260 2437 -421 6 686 1430 84 26 0 chr17 13317629 13317819 -81954832 + B2_Mm2 SINE B2 1 195 0 6 686 307 280 64 11 chr17 13317819 13317913 -81954738 + L1MEg LINE L1 1831 1929 -4155 6 686 237 188 42 0 chr17 13317913 13317961 -81954690 + GA-rich Low_complexity Low_complexity 3 52 0 6 686 259 376 0 35 chr17 13319115 13319228 -81953423 + Charlie5 DNA MER1_type 1 109 -2515 6 686 747 236 14 0 chr17 13319318 13319462 -81953189 + B1_Mur1 SINE Alu 2 147 -2 6 686 786 245 123 25 chr17 13319741 13319984 -81952667 + B4 SINE B4 1 267 -25 6 686 361 85 0 0 chr17 13320518 13320565 -81952086 - MTD LTR MaLR -8 411 365 6 686 1890 139 27 116 chr17 13320571 13320978 -81951673 + ORR1C1 LTR MaLR 3 373 -5 6 686 1443 232 53 9 chr17 13320983 13321305 -81951346 - MTD LTR MaLR -66 353 18 6 686 1017 214 35 0 chr17 13323302 13323503 -81949148 + B3 SINE B2 3 210 -6 6 686 25 0 0 0 chr17 13325405 13325430 -81947221 + GC_rich Low_complexity Low_complexity 1 25 0 6 686 240 261 0 0 chr17 13325709 13325828 -81946823 + (TG)n Simple_repeat Simple_repeat 2 120 0 6 686 276 272 28 37 chr17 13326330 13326437 -81946214 + MER92C LTR ERV1 288 393 -161 6 686 186 340 0 117 chr17 13326658 13326778 -81945873 - L3 LINE CR1 -130 4359 4254 6 686 315 275 83 51 chr17 13328861 13329018 -81943633 - L1MC4a LINE L1 -1978 5904 5743 6 686 911 215 58 24 chr17 13329389 13329594 -81943057 + B4A SINE B4 26 237 -55 6 686 815 72 0 9 chr17 13329731 13329843 -81942808 + B1_Mus2 SINE Alu 24 134 -13 6 686 260 70 0 23 chr17 13329843 13329887 -81942764 + (CAAA)n Simple_repeat Simple_repeat 1 43 0 6 686 239 280 13 39 chr17 13330275 13330353 -81942298 + ID_B1 SINE B4 73 148 -76 6 686 293 250 102 20 chr17 13330295 13330393 -81942258 + PB1D10 SINE Alu 12 117 0 6 686 180 200 0 0 chr17 13330755 13330815 -81941836 + GA-rich Low_complexity Low_complexity 1 60 0 6 686 664 164 50 27 chr17 13330836 13330981 -81941670 + MTD LTR MaLR 261 419 0 6 686 15859 62 50 2 chr17 13330983 13334188 -81938463 + L1VL4 LINE L1 26 3378 -181 6 686 518 225 49 16 chr17 13334188 13334310 -81938341 + B1_Mur2 SINE Alu 18 143 -6 6 686 355 267 9 37 chr17 13334455 13334567 -81938084 + B1F SINE Alu 6 140 -9 6 686 376 225 50 0 chr17 13334585 13334665 -81937986 + BC1_Mm scRNA scRNA 1 84 -68 6 686 350 42 21 0 chr17 13334706 13334754 -81937897 + (GGGA)n Simple_repeat Simple_repeat 3 51 0 6 686 654 13 0 0 chr17 13335483 13335558 -81937093 + (TCCC)n Simple_repeat Simple_repeat 4 78 0 6 686 279 0 0 0 chr17 13336266 13336297 -81936354 + (CTG)n Simple_repeat Simple_repeat 3 33 0 6 686 294 343 37 0 chr17 13336884 13336992 -81935659 + MER34A LTR ERV1 6 117 -454 6 686 533 274 87 115 chr17 13337093 13337509 -81935142 + RMER10A LTR ERVL 18 421 -21 6 686 255 31 0 0 chr17 13337946 13337978 -81934673 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 686 4891 45 10 3 chr17 13337985 13338568 -81934083 + LTRIS_Mus LTR ERV1 1 587 0 6 686 5403 197 64 41 chr17 13338568 13339367 -81933284 - RMER12B LTR ERVK -213 1191 368 6 686 1493 54 16 5 chr17 13339367 13339554 -81933097 + B2_Mm2 SINE B2 2 190 -5 6 686 5403 202 59 24 chr17 13339554 13339907 -81932744 - RMER12B LTR ERVK -1037 367 1 6 686 494 291 102 14 chr17 13340020 13340096 -81932555 + MLT1A LTR MaLR 15 93 -281 6 686 2036 178 16 13 chr17 13340096 13340158 -81932493 - ORR1C1 LTR MaLR 0 378 314 6 686 483 18 0 0 chr17 13340158 13340214 -81932437 + (GA)n Simple_repeat Simple_repeat 2 57 0 6 686 2036 178 16 13 chr17 13340214 13340528 -81932123 - ORR1C1 LTR MaLR -65 313 1 6 686 494 291 102 14 chr17 13340528 13340667 -81931984 + MLT1A LTR MaLR 94 248 -126 6 686 625 296 25 2 chr17 13341021 13341246 -81931405 + L1M2 LINE L1 3917 4161 -1982 6 686 1602 216 15 80 chr17 13341246 13341652 -81930999 + ORR1B1 LTR MaLR 13 392 -2 6 686 547 265 77 97 chr17 13341652 13341789 -81930862 + L1M2 LINE L1 4196 4323 -1820 6 686 714 156 52 90 chr17 13341789 13341944 -81930707 + B1_Mur4 SINE Alu 1 149 -1 6 686 547 265 77 97 chr17 13341944 13342324 -81930327 + L1M2 LINE L1 4324 4702 -1441 6 686 807 298 135 45 chr17 13342436 13343475 -81929176 + L1M2 LINE L1 4647 5788 -92 6 686 2128 151 8 38 chr17 13343617 13343988 -81928663 + RLTR14 LTR ERV1 1 360 -22 6 686 3261 167 22 64 chr17 13344050 13344691 -81927960 + RLTR18 LTR ERVK 1 614 -2 6 686 1643 194 112 8 chr17 13344726 13345101 -81927550 + RMER5 LTR ERV1 121 534 0 6 686 527 200 190 14 chr17 13345820 13345972 -81926679 - ORR1E LTR MaLR -138 232 63 6 686 3107 25 0 42 chr17 13345976 13346359 -81926292 - IAPLTR1_Mm LTR ERVK 0 367 1 6 686 56210 21 21 7 chr17 13346359 13352747 -81919904 - IAPEz-int LTR ERVK 0 6481 8 6 686 3107 25 0 42 chr17 13352747 13353130 -81919521 - IAPLTR1_Mm LTR ERVK 0 367 1 6 686 278 200 0 18 chr17 13353135 13353191 -81919460 - ORR1E LTR MaLR -299 60 6 6 686 233 329 72 40 chr17 13353293 13353445 -81919206 - MIRc SINE MIR -84 184 28 6 686 241 312 153 46 chr17 13354078 13354209 -81918442 - MER34A1 LTR ERV1 -8 579 435 6 686 307 347 54 20 chr17 13354252 13354399 -81918252 - MER45B DNA Tip100 -836 204 53 6 686 1903 180 65 12 chr17 13354471 13354870 -81917781 + MTC LTR MaLR 1 420 -1 6 686 811 213 77 0 chr17 13354986 13355169 -81917482 - Lx5 LINE L1 -3 7047 6851 6 686 807 220 18 0 chr17 13355155 13355323 -81917328 + Lx5 LINE L1 6565 6735 -315 6 686 261 302 68 68 chr17 13355331 13355434 -81917217 + RSINE1 SINE B4 50 152 -13 6 686 423 0 0 0 chr17 13355437 13355484 -81917167 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 686 1890 123 66 13 chr17 13355489 13355794 -81916857 - ORR1A4 LTR MaLR -8 321 1 6 686 22 0 0 0 chr17 13355799 13355821 -81916830 + AT_rich Low_complexity Low_complexity 1 22 0 6 686 414 0 0 0 chr17 13355873 13355919 -81916732 + (TC)n Simple_repeat Simple_repeat 1 46 0 6 686 274 329 41 0 chr17 13356107 13356180 -81916471 - AluG_3 SINE Alu -97 214 139 6 686 2902 16 0 0 chr17 13356193 13356515 -81916136 + RLTRETN_Mm LTR ERVK 1 322 0 6 686 41442 26 6 9 chr17 13356515 13361373 -81911278 + MMETn-int LTR ERVK 1 4844 0 6 686 2861 16 3 0 chr17 13361373 13361694 -81910957 + RLTRETN_Mm LTR ERVK 1 322 0 6 686 2644 52 9 12 chr17 13361928 13362256 -81910395 - ORR1A2 LTR MaLR 0 327 1 6 686 3114 154 18 2 chr17 13363698 13364191 -81908460 + Lx4A LINE L1 6487 6987 -71 6 686 506 347 0 7 chr17 13365799 13365921 -81906730 + B4A SINE B4 149 270 -22 6 686 324 0 0 0 chr17 13365921 13365957 -81906694 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 686 506 347 0 7 chr17 13365957 13365979 -81906672 + B4A SINE B4 271 292 0 6 686 280 234 0 0 chr17 13366053 13366100 -81906551 - ID4_ SINE ID -9 74 28 6 686 210 171 0 0 chr17 13366100 13366141 -81906510 + CT-rich Low_complexity Low_complexity 2 42 0 6 686 1109 75 7 13 chr17 13366142 13366291 -81906360 - B1_Mus1 SINE Alu 0 148 1 6 686 368 324 0 28 chr17 13366374 13366482 -81906169 + ID_B1 SINE B4 81 185 -39 6 686 559 226 9 54 chr17 13366385 13366497 -81906154 + B1_Mur1 SINE Alu 11 117 -3 6 686 750 233 16 58 chr17 13367265 13367456 -81905195 + B3A SINE B2 1 183 -15 6 686 1385 81 22 0 chr17 13367556 13367741 -81904910 + B2_Mm2 SINE B2 3 191 -4 6 686 1931 133 64 61 chr17 13367821 13368230 -81904421 + RMER17C LTR ERVK 1 410 0 6 686 1050 90 14 0 chr17 13368936 13369081 -81903570 - B1_Mus1 SINE Alu 0 148 2 6 686 195 272 50 71 chr17 13369156 13369255 -81903396 + L3 LINE CR1 725 821 -3668 6 85 329 232 101 40 chr17 13369279 13369378 -81903273 + RMER1B Other Other 11 115 -951 6 687 3968 140 53 24 chr17 13369378 13370098 -81902553 + RMER12 LTR ERVK 1 934 -388 6 687 597 28 0 0 chr17 13370098 13370169 -81902482 + (TC)n Simple_repeat Simple_repeat 2 72 0 7 687 228 35 0 0 chr17 13370169 13370197 -81902454 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 687 1064 255 184 119 chr17 13370197 13370568 -81902083 + RMER12 LTR ERVK 935 1321 -1 6 687 4209 183 93 22 chr17 13370568 13371462 -81901189 + RMER1B Other Other 110 1066 0 6 687 270 272 71 71 chr17 13371744 13371843 -81900808 - MLT1A0 LTR MaLR 0 365 267 7 687 1102 320 196 65 chr17 13371820 13372646 -81900005 + MLT-int LTR MaLR 74 1008 -727 7 687 278 163 20 0 chr17 13372911 13372960 -81899691 + RLTR14 LTR ERV1 314 363 -19 7 687 915 249 184 37 chr17 13373899 13374220 -81898431 - ORR1D2 LTR MaLR -1 369 2 7 687 234 0 0 0 chr17 13375131 13375157 -81897494 + (TG)n Simple_repeat Simple_repeat 2 27 0 7 687 551 255 63 7 chr17 13376154 13376296 -81896355 - MTD LTR MaLR -1 418 269 7 687 794 194 6 12 chr17 13376296 13376468 -81896183 + Lx5 LINE L1 6880 7050 0 7 687 454 213 0 100 chr17 13376533 13376550 -81896101 + MT2B LTR ERVL 151 155 -446 7 687 796 159 0 0 chr17 13376550 13376676 -81895975 + B1_Mm SINE Alu 1 126 -21 7 687 971 97 7 0 chr17 13376682 13376827 -81895824 + (GGA)n Simple_repeat Simple_repeat 3 148 0 7 687 210 37 0 0 chr17 13376923 13376950 -81895701 + (CAA)n Simple_repeat Simple_repeat 2 28 0 7 687 566 248 105 20 chr17 13376950 13377102 -81895549 - MTD LTR MaLR -140 279 115 7 687 418 191 30 8 chr17 13377102 13377234 -81895417 + GA-rich Low_complexity Low_complexity 1 135 0 7 687 414 274 10 0 chr17 13377235 13377337 -81895314 - MTD LTR MaLR -315 104 2 7 687 189 0 0 0 chr17 13377727 13377748 -81894903 + (TTG)n Simple_repeat Simple_repeat 3 23 0 7 687 750 213 0 0 chr17 13378519 13378660 -81893991 - B1_Mur4 SINE Alu -8 142 2 7 687 2382 168 8 0 chr17 13379365 13379745 -81892906 + RMER1A Other Other 304 686 -344 7 687 318 106 0 0 chr17 13379880 13379927 -81892724 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 687 402 21 0 0 chr17 13379927 13379973 -81892678 + (GA)n Simple_repeat Simple_repeat 2 48 0 7 687 662 279 97 18 chr17 13380027 13380253 -81892398 - MLT1B LTR MaLR -146 244 1 7 687 480 299 33 16 chr17 13381877 13382059 -81890592 - MER57C2 LTR ERV1 -173 238 48 7 687 245 224 0 17 chr17 13382540 13382599 -81890052 - AluF_3 SINE Alu -117 194 137 7 687 596 196 0 43 chr17 13384532 13384649 -81888002 + B1_Mur3 SINE Alu 38 149 0 7 687 360 167 0 0 chr17 13384691 13384763 -81887888 + (CACAA)n Simple_repeat Simple_repeat 3 74 0 7 687 467 283 110 65 chr17 13384874 13385015 -81887636 - B3A SINE B2 -33 165 16 7 687 2309 154 30 15 chr17 13385015 13385416 -81887235 + MTB_Mm LTR MaLR 1 407 0 7 687 467 283 110 65 chr17 13385416 13385429 -81887222 - B3A SINE B2 -183 15 4 7 687 338 274 35 17 chr17 13385432 13385547 -81887104 - MER53 DNA hAT -26 167 51 7 687 252 0 0 0 chr17 13385712 13385740 -81886911 + (TA)n Simple_repeat Simple_repeat 2 29 0 7 687 3231 52 25 0 chr17 13385756 13386157 -81886494 - RLTR10A LTR ERVK 0 411 1 7 687 5256 63 26 14 chr17 13386157 13386848 -81885803 - RLTR10-int LTR ERVK -1 1986 1288 7 687 1652 74 5 5 chr17 13386849 13387067 -81885584 - IAP-d-int LTR ERVK -658 5884 5667 7 687 3522 69 88 14 chr17 13387071 13387557 -81885094 - IAP-d-int LTR ERVK -1015 5527 5006 7 687 2074 131 12 73 chr17 13387558 13388049 -81884602 - IAP-d-int LTR ERVK -1385 602 295 7 687 3083 57 57 0 chr17 13388049 13388438 -81884213 - RLTR10A LTR ERVK 0 411 1 7 687 2779 64 56 3 chr17 13388581 13388973 -81883678 + BGLII LTR ERVK 9 421 0 7 687 260 296 33 22 chr17 13389164 13389254 -81883397 - PB1D10 SINE Alu -2 115 25 7 687 549 263 36 0 chr17 13389395 13389532 -81883119 - B1F SINE Alu -6 143 2 7 687 862 75 142 0 chr17 13389632 13389752 -81882899 + B1_Mm SINE Alu 2 138 -9 7 687 662 286 6 12 chr17 13389764 13389934 -81882717 + B3 SINE B2 48 216 0 7 687 588 237 55 60 chr17 13390106 13390331 -81882320 - MTE2a LTR MaLR -1 418 207 7 687 977 155 171 0 chr17 13390815 13390996 -81881655 + B3 SINE B2 1 212 -4 7 687 546 119 0 0 chr17 13391321 13391405 -81881246 + (GA)n Simple_repeat Simple_repeat 2 85 0 7 687 312 181 129 24 chr17 13391405 13391490 -81881161 + L1M2 LINE L1 4149 4242 -1901 7 687 964 267 5 5 chr17 13391933 13392144 -81880507 - B4 SINE B4 0 292 82 7 687 902 117 6 0 chr17 13392163 13392342 -81880309 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 7 687 216 184 0 0 chr17 13392344 13392382 -81880269 + CT-rich Low_complexity Low_complexity 1 38 0 7 687 513 176 127 67 chr17 13392394 13392528 -81880123 - B1_Mur4 SINE Alu -8 142 1 7 687 509 259 64 12 chr17 13392692 13392864 -81879787 - Charlie1a DNA MER1_type -235 1220 1040 7 687 194 128 26 0 chr17 13393296 13393335 -81879316 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 687 2212 174 114 83 chr17 13394039 13394359 -81878292 + RLTR31_Mm LTR ERVK 1 321 -240 7 687 1020 94 43 0 chr17 13394359 13394497 -81878154 + B1_Mus2 SINE Alu 2 145 -2 7 687 2212 174 114 83 chr17 13394497 13394720 -81877931 + RLTR31_Mm LTR ERVK 322 561 0 7 687 980 250 99 44 chr17 13395095 13395438 -81877213 + MTE2b LTR MaLR 8 369 -10 7 687 183 42 0 0 chr17 13395845 13395869 -81876782 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 7 687 180 125 0 0 chr17 13396725 13396757 -81875894 + (GGGTG)n Simple_repeat Simple_repeat 1 32 0 7 687 279 0 0 0 chr17 13396964 13396995 -81875656 + (TC)n Simple_repeat Simple_repeat 2 32 0 7 687 635 250 111 48 chr17 13397809 13397998 -81874653 + MTE2a LTR MaLR 179 379 0 7 687 518 248 0 8 chr17 13398819 13398937 -81873714 + PB1D9 SINE Alu 3 119 -1 7 687 766 148 12 0 chr17 13399278 13399440 -81873211 + (TGGA)n Simple_repeat Simple_repeat 2 165 0 7 687 822 143 45 0 chr17 13399441 13399574 -81873077 + RLTR41 LTR ERV1 1 139 -307 7 687 1616 158 50 14 chr17 13399641 13399923 -81872728 + RLTR41 LTR ERV1 155 446 0 7 687 678 151 35 0 chr17 13399923 13400095 -81872556 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 7 687 228 71 0 0 chr17 13400096 13400138 -81872513 + L1ME2z LINE L1 6272 6313 -131 7 687 864 246 149 17 chr17 13400152 13400382 -81872269 + MTEa LTR MaLR 1 250 -129 7 687 290 65 65 0 chr17 13400382 13400444 -81872207 + (TGGA)n Simple_repeat Simple_repeat 1 66 0 7 687 864 246 149 17 chr17 13400444 13400515 -81872136 + MTEa LTR MaLR 251 341 -38 7 687 306 206 0 0 chr17 13400848 13400916 -81871735 + CT-rich Low_complexity Low_complexity 1 68 0 7 687 1181 55 7 0 chr17 13400916 13401061 -81871590 - B1_Mus2 SINE Alu -1 146 1 7 687 1092 96 0 0 chr17 13401732 13401878 -81870773 - B1_Mus2 SINE Alu 0 147 2 7 687 333 0 0 0 chr17 13402797 13402834 -81869817 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 687 459 0 0 0 chr17 13402834 13402884 -81869767 + (GA)n Simple_repeat Simple_repeat 2 52 0 7 687 1756 233 63 136 chr17 13402956 13403558 -81869093 - RLTR1D LTR ERV1 0 605 48 7 687 188 206 206 0 chr17 13404162 13404235 -81868416 + L3 LINE CR1 3495 3582 -907 7 687 457 165 35 0 chr17 13404301 13404386 -81868265 - MLT1D LTR MaLR -16 489 402 7 687 1148 280 45 45 chr17 13404440 13404814 -81867837 + MTEa LTR MaLR 1 374 -5 7 687 237 220 14 41 chr17 13405642 13405792 -81866859 + (CA)n Simple_repeat Simple_repeat 1 145 0 7 687 375 78 0 0 chr17 13405815 13405866 -81866785 + (CATA)n Simple_repeat Simple_repeat 3 53 0 7 687 192 40 0 0 chr17 13407697 13407722 -81864929 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 7 687 200 333 76 13 chr17 13408494 13408573 -81864078 + MIRc SINE MIR 98 181 -87 7 687 310 272 74 0 chr17 13409300 13409381 -81863270 + B4 SINE B4 1 87 -205 7 687 180 77 0 0 chr17 13409382 13409408 -81863243 + (GAAA)n Simple_repeat Simple_repeat 2 27 0 7 687 539 15 15 0 chr17 13412331 13412399 -81860252 + (TG)n Simple_repeat Simple_repeat 1 69 0 7 687 192 77 0 0 chr17 13412431 13412457 -81860194 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 7 687 244 307 27 0 chr17 13412807 13412882 -81859769 + Charlie1 DNA MER1_type 773 849 -1932 7 687 1021 282 103 78 chr17 13412882 13413366 -81859285 - RLTR19 LTR ERVK -1 498 3 7 687 315 85 0 0 chr17 13413822 13413869 -81858782 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 687 370 314 17 0 chr17 13413895 13414070 -81858581 + (TG)n Simple_repeat Simple_repeat 1 178 0 7 687 7845 155 41 28 chr17 13414154 13416221 -81856430 - Lx5 LINE L1 0 7050 4958 7 687 740 158 6 109 chr17 13416366 13416522 -81856129 - B1_Mus2 SINE Alu -5 142 3 7 687 189 94 0 0 chr17 13416761 13416793 -81855858 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 7 687 990 97 20 7 chr17 13416798 13416944 -81855707 - B1_Mus1 SINE Alu 0 148 1 7 687 1113 266 144 84 chr17 13416969 13417585 -81855066 - Lx8 LINE L1 -4 7469 6817 7 687 438 256 123 65 chr17 13417626 13417919 -81854732 - L1_Mur3 LINE L1 -345 5535 5226 7 687 258 32 0 0 chr17 13417967 13417998 -81854653 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 687 989 109 0 0 chr17 13417998 13418136 -81854515 - B1_Mus2 SINE Alu -9 138 1 7 687 206 292 0 8 chr17 13420158 13420239 -81852412 + GA-rich Low_complexity Low_complexity 1 80 0 7 687 227 269 25 25 chr17 13421766 13421846 -81850805 + GA-rich Low_complexity Low_complexity 1 80 0 7 687 965 279 108 76 chr17 13422247 13422721 -81849930 - RLTR19 LTR ERVK -1 498 10 7 687 32 0 0 0 chr17 13422750 13422782 -81849869 + AT_rich Low_complexity Low_complexity 1 32 0 7 687 273 156 73 0 chr17 13423076 13423172 -81849479 + (AGTTG)n Simple_repeat Simple_repeat 1 103 0 7 687 297 0 0 0 chr17 13423248 13423281 -81849370 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 687 310 305 24 0 chr17 13423312 13423479 -81849172 + (TG)n Simple_repeat Simple_repeat 1 171 0 7 687 7374 162 49 24 chr17 13423562 13425611 -81847040 - Lx5 LINE L1 0 7050 4958 7 687 780 158 7 41 chr17 13425755 13425900 -81846751 - B1_Mus2 SINE Alu -5 142 3 7 687 1071 82 7 26 chr17 13426164 13426315 -81846336 - B1_Mus1 SINE Alu 0 148 1 7 687 1141 259 167 79 chr17 13426343 13426941 -81845710 - Lx8 LINE L1 -6 7467 6817 7 687 444 291 85 34 chr17 13426982 13427277 -81845374 - L1_Mur3 LINE L1 -345 5535 5226 7 687 1150 62 7 0 chr17 13427337 13427481 -81845170 - B1_Mus2 SINE Alu -2 145 1 7 687 259 279 14 35 chr17 13427573 13427718 -81844933 + T-rich Low_complexity Low_complexity 2 143 0 7 687 221 263 0 66 chr17 13429514 13429636 -81843015 + GA-rich Low_complexity Low_complexity 3 116 0 8 687 262 274 41 134 chr17 13430708 13430805 -81841846 - MTEa-int LTR MaLR -930 650 563 8 687 293 229 0 24 chr17 13430891 13430976 -81841675 + (TATG)n Simple_repeat Simple_repeat 4 86 0 8 687 243 343 51 61 chr17 13431012 13431226 -81841425 - MTEa-int LTR MaLR -1368 212 1 8 687 247 326 23 23 chr17 13431226 13431310 -81841341 - MTEa LTR MaLR -18 361 278 8 687 2919 45 14 0 chr17 13431351 13431703 -81840948 + IAPEY2_LTR LTR ERVK 1 357 0 8 687 312 356 0 0 chr17 13431942 13432032 -81840619 + PB1D10 SINE Alu 23 112 -5 8 687 252 0 0 0 chr17 13434194 13434222 -81838429 + (CTCTG)n Simple_repeat Simple_repeat 4 31 0 8 687 337 324 176 0 chr17 13434526 13434662 -81837989 - L1M4 LINE L1 -1564 4582 4423 8 687 2546 180 103 12 chr17 13434702 13435214 -81837437 - Lx2B LINE L1 -5 6995 6437 8 687 2047 117 12 15 chr17 13435217 13435555 -81837096 + IAPLTR1a_Mm LTR ERVK 1 337 0 8 687 56279 30 9 2 chr17 13435555 13441981 -81830670 + IAPEz-int LTR ERVK 8 6478 -3 8 687 2047 117 12 15 chr17 13441985 13442323 -81830328 + IAPLTR1a_Mm LTR ERVK 1 337 0 8 687 1863 166 49 60 chr17 13442329 13442760 -81829891 - Lx2B LINE L1 -567 6433 6008 8 687 683 132 9 0 chr17 13442760 13442866 -81829785 - U6 snRNA snRNA 0 107 1 8 687 622 138 11 0 chr17 13442867 13442961 -81829690 - MTC LTR MaLR -326 95 1 8 687 230 151 107 54 chr17 13442980 13443036 -81829615 - L1M4 LINE L1 -2102 4044 3986 8 687 264 252 266 33 chr17 13443043 13443230 -81829421 - MIRb SINE MIR -39 229 4 8 687 378 0 0 0 chr17 13443258 13443300 -81829351 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 687 1557 208 131 11 chr17 13444477 13444851 -81827800 + MTD LTR MaLR 1 419 0 8 687 241 236 18 0 chr17 13446272 13446327 -81826324 - MLT1F LTR MaLR 0 680 625 8 687 258 324 130 16 chr17 13446377 13446562 -81826089 - MLT1F LTR MaLR -161 387 182 8 687 262 253 0 13 chr17 13446813 13446889 -81825762 - MLT1A1 LTR MaLR -1 407 333 8 687 368 257 115 65 chr17 13447749 13447949 -81824702 + B3 SINE B2 4 213 -3 8 687 549 218 9 9 chr17 13447968 13448079 -81824572 + PB1D7 SINE Alu 9 119 -1 8 687 979 109 12 0 chr17 13448198 13448363 -81824288 + (TTCC)n Simple_repeat Simple_repeat 1 167 0 8 687 452 232 6 30 chr17 13448373 13448542 -81824109 + C-rich Low_complexity Low_complexity 1 165 0 8 687 300 205 22 50 chr17 13448562 13448742 -81823909 + C-rich Low_complexity Low_complexity 2 176 0 8 687 1121 23 48 0 chr17 13498820 13499130 -81773521 + (CTGTG)n Simple_repeat Simple_repeat 1 325 0 8 687 1843 183 94 3 chr17 13499415 13499799 -81772852 + MTD LTR MaLR 1 419 0 8 687 410 0 20 0 chr17 13500342 13500392 -81772259 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 688 229 73 42 56 chr17 13502695 13502767 -81769884 + T-rich Low_complexity Low_complexity 3 73 0 2 688 926 59 8 0 chr17 13503265 13503383 -81769268 - B1_Mus1 SINE Alu 0 148 30 3 688 1506 58 11 0 chr17 13503410 13503600 -81769051 + B2_Mm1t SINE B2 1 192 -1 4 688 1258 95 0 6 chr17 13503941 13504111 -81768540 + B2_Mm2 SINE B2 3 171 -24 5 688 1384 143 39 11 chr17 13504206 13504468 -81768183 - MTA_Mm-int LTR MaLR -1292 288 1 6 688 3410 33 8 0 chr17 13504468 13504860 -81767791 - MTA_Mm LTR MaLR 0 396 2 6 688 767 144 69 41 chr17 13504966 13505111 -81767540 + B1_Mur3 SINE Alu 1 149 0 7 688 443 215 20 3 chr17 13505352 13505470 -81767181 + RMER4B LTR ERVK 67 190 -276 8 688 2320 117 3 0 chr17 13505547 13505873 -81766778 - ORR1A2 LTR MaLR 0 327 1 9 688 192 345 107 16 chr17 13505914 13506035 -81766616 + MIR SINE MIR 3 134 -128 1 688 198 0 0 0 chr17 13506557 13506579 -81766072 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1 688 7338 78 14 0 chr17 13506579 13508136 -81764515 - L1_Mus1 LINE L1 -2 6565 4984 1 688 612 230 57 36 chr17 13509017 13509157 -81763494 + RSINE1 SINE B4 23 165 0 1 688 311 209 41 13 chr17 13510859 13510945 -81761706 + ORR1B1 LTR MaLR 233 392 -2 1 688 488 277 64 89 chr17 13510959 13511081 -81761570 + L1M2 LINE L1 4217 4334 -1809 1 688 733 156 52 90 chr17 13511081 13511236 -81761415 + B1_Mur4 SINE Alu 1 149 -1 1 688 488 277 64 89 chr17 13511236 13511616 -81761035 + L1M2 LINE L1 4335 4706 -1437 1 688 732 310 150 50 chr17 13511732 13512771 -81759880 + L1M2 LINE L1 4647 5788 -92 1 688 2319 146 8 3 chr17 13512913 13513271 -81759380 + RLTR14 LTR ERV1 1 360 -22 1 688 3204 176 19 67 chr17 13513333 13513978 -81758673 + RLTR18 LTR ERVK 1 614 -2 1 688 1494 198 122 21 chr17 13514012 13514388 -81758263 + RMER5 LTR ERV1 121 534 0 1 688 763 220 129 18 chr17 13515118 13515329 -81757322 - ORR1E LTR MaLR -138 232 6 2 688 243 329 72 40 chr17 13515430 13515582 -81757069 - MIRc SINE MIR -84 184 28 2 688 236 250 88 0 chr17 13516278 13516346 -81756305 - MER34A1 LTR ERV1 -79 508 435 2 688 287 336 61 27 chr17 13516389 13516536 -81756115 - MER45B DNA Tip100 -836 204 53 2 688 1988 194 58 2 chr17 13516608 13517006 -81755645 + MTC LTR MaLR 1 420 -1 2 688 671 215 73 31 chr17 13517109 13517301 -81755350 - Lx5 LINE L1 0 7050 6851 2 688 587 231 96 0 chr17 13517287 13517443 -81755208 + Lx5 LINE L1 6565 6735 -315 2 688 329 231 58 107 chr17 13517451 13517572 -81755079 + RSINE1 SINE B4 50 164 -1 2 688 1499 151 8 23 chr17 13517577 13517835 -81754816 - ORR1A4 LTR MaLR -8 321 68 2 688 301 333 69 17 chr17 13517946 13518062 -81754589 - PB1 SINE Alu -2 125 4 2 688 2630 56 9 12 chr17 13518306 13518634 -81754017 - ORR1A2 LTR MaLR 0 327 1 2 688 2909 154 18 2 chr17 13520058 13520551 -81752100 + Lx4A LINE L1 6487 6987 -71 3 688 550 319 0 34 chr17 13522134 13522256 -81750395 + B4A SINE B4 149 270 -22 3 688 342 0 0 0 chr17 13522256 13522294 -81750357 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 688 550 319 0 34 chr17 13522294 13522320 -81750331 + B4A SINE B4 271 292 0 3 688 262 265 0 0 chr17 13522392 13522441 -81750210 - ID4_ SINE ID -9 74 26 3 688 396 0 0 0 chr17 13522470 13522514 -81750137 + (TTG)n Simple_repeat Simple_repeat 2 45 0 3 688 1085 75 7 33 chr17 13522514 13522655 -81749996 - B1_Mus1 SINE Alu -8 140 1 3 688 379 324 0 28 chr17 13522743 13522851 -81749800 + ID_B1 SINE B4 81 185 -39 3 688 538 236 9 54 chr17 13522754 13522866 -81749785 + B1_Mur1 SINE Alu 11 117 -3 3 688 207 238 55 73 chr17 13523451 13523560 -81749091 + L3 LINE CR1 4362 4468 -21 3 688 21 0 0 0 chr17 13527872 13527893 -81744758 + GC_rich Low_complexity Low_complexity 1 21 0 3 688 246 314 57 9 chr17 13527992 13528098 -81744553 - LTR40a LTR ERVL 0 519 409 4 688 225 309 0 0 chr17 13528256 13528311 -81744340 - LTR40a LTR ERVL -400 119 65 4 688 515 256 8 0 chr17 13529100 13529221 -81743430 + PB1 SINE Alu 1 122 -5 4 688 245 296 0 0 chr17 13529866 13529929 -81742722 + B1F SINE Alu 55 149 0 4 688 198 71 0 0 chr17 13530176 13530204 -81742447 + (CACCC)n Simple_repeat Simple_repeat 4 31 0 4 688 239 54 0 26 chr17 13530238 13530276 -81742375 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 688 183 42 0 0 chr17 13531186 13531210 -81741441 + (T)n Simple_repeat Simple_repeat 1 24 0 4 688 322 282 13 0 chr17 13532305 13532383 -81740268 - ID4 SINE ID -4 79 1 4 688 1140 302 44 20 chr17 13533059 13533468 -81739183 - MTD LTR MaLR 0 419 1 4 688 337 344 59 18 chr17 13533468 13533689 -81738962 + MLT1A LTR MaLR 145 374 0 4 688 557 326 115 10 chr17 13533845 13534245 -81738406 + L1MB3 LINE L1 5498 5939 -244 4 688 311 161 192 13 chr17 13534566 13534650 -81738001 - MTD LTR MaLR -226 193 66 5 688 185 323 247 0 chr17 13535657 13535815 -81736836 - MIR SINE MIR -2 260 64 5 688 384 22 0 0 chr17 13539334 13539379 -81733272 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 688 2560 152 111 6 chr17 13539957 13540025 -81732626 - RLTR11A LTR ERVK -1 527 459 5 688 789 41 0 0 chr17 13540025 13540122 -81732529 + (CA)n Simple_repeat Simple_repeat 2 98 0 5 688 2560 152 111 6 chr17 13540122 13540530 -81732121 - RLTR11A LTR ERVK -70 458 1 5 688 409 271 76 8 chr17 13540746 13540865 -81731786 + B1F SINE Alu 23 149 0 5 688 254 282 13 13 chr17 13540865 13540944 -81731707 + GA-rich Low_complexity Low_complexity 2 80 0 5 688 516 245 0 44 chr17 13541839 13541997 -81730654 + HAL1-2a_MD LINE L1 2345 2495 -529 5 688 334 257 13 87 chr17 13542209 13542358 -81730293 - RLTR42-int LTR ERVK -4191 1331 1194 5 688 190 289 53 53 chr17 13542678 13542773 -81729878 - L4 LINE RTE -1574 455 361 5 688 1135 124 110 38 chr17 13543820 13544029 -81728622 - URR1A DNA MER1_type 0 226 3 6 688 956 213 69 56 chr17 13544691 13545097 -81727554 + MT2B LTR ERVL 1 553 -48 6 688 750 227 0 3 chr17 13545146 13545459 -81727192 + (TG)n Simple_repeat Simple_repeat 1 311 0 6 688 183 80 0 0 chr17 13545469 13545494 -81727157 + (TATG)n Simple_repeat Simple_repeat 2 26 0 6 688 447 35 0 0 chr17 13548993 13549050 -81723601 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 688 224 171 0 47 chr17 13550292 13550335 -81722316 + C-rich Low_complexity Low_complexity 1 41 0 6 688 310 159 29 0 chr17 13550336 13550405 -81722246 + CT-rich Low_complexity Low_complexity 1 71 0 6 688 3299 244 94 17 chr17 13550405 13551368 -81721283 + Lx7 LINE L1 6179 7216 -480 6 688 251 254 15 31 chr17 13551476 13551523 -81721128 + T-rich Low_complexity Low_complexity 85 129 0 6 688 318 50 0 0 chr17 13551523 13551563 -81721088 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 688 251 254 15 31 chr17 13551563 13551645 -81721006 + T-rich Low_complexity Low_complexity 3 84 0 7 688 883 26 18 0 chr17 13551648 13551762 -81720889 + (TAGA)n Simple_repeat Simple_repeat 2 117 0 7 688 227 207 0 17 chr17 13551780 13551839 -81720812 + Lx7 LINE L1 7611 7668 -28 6 688 195 177 32 16 chr17 13552829 13552892 -81719759 + CT-rich Low_complexity Low_complexity 4 67 0 7 688 999 123 30 7 chr17 13552935 13553208 -81719443 + (TATG)n Simple_repeat Simple_repeat 1 279 0 7 688 603 294 21 22 chr17 13553218 13553398 -81719253 - B3A SINE B2 -9 186 1 7 688 228 377 84 0 chr17 13553407 13553561 -81719090 - B4A SINE B4 -73 219 53 7 688 195 177 32 16 chr17 13553948 13554011 -81718640 + CT-rich Low_complexity Low_complexity 4 67 0 7 688 1045 116 27 0 chr17 13554052 13554277 -81718374 + (TATG)n Simple_repeat Simple_repeat 1 231 0 7 688 549 300 28 23 chr17 13554300 13554479 -81718172 - B3A SINE B2 -9 186 1 7 688 233 250 31 83 chr17 13554535 13554631 -81718020 - B3A SINE B2 -80 118 28 7 688 298 289 33 0 chr17 13554567 13554657 -81717994 - B4A SINE B4 -199 93 1 8 688 369 58 0 0 chr17 13555691 13555743 -81716908 + (TCTG)n Simple_repeat Simple_repeat 1 52 0 8 688 475 273 337 4 chr17 13555771 13556026 -81716625 - ORR1D2 LTR MaLR 0 370 31 8 688 497 274 32 194 chr17 13556036 13556128 -81716523 + MTD LTR MaLR 1 66 -353 8 688 2165 59 0 11 chr17 13556128 13556404 -81716247 - L1Md_F2 LINE L1 0 6582 6310 8 688 497 274 32 194 chr17 13556404 13556564 -81716087 + MTD LTR MaLR 67 212 -207 8 688 480 48 0 0 chr17 13556565 13556628 -81716023 + (GA)n Simple_repeat Simple_repeat 1 63 0 8 688 390 42 0 0 chr17 13558793 13558841 -81713810 + (TCC)n Simple_repeat Simple_repeat 3 50 0 8 688 332 306 95 20 chr17 13558841 13559089 -81713562 - HAL1-3A_ME LINE L1 -419 2439 2284 8 688 382 215 0 36 chr17 13559090 13559230 -81713421 + CT-rich Low_complexity Low_complexity 2 136 0 8 688 242 222 161 32 chr17 13559232 13559325 -81713326 + YREP_Mm Unknown Unknown 190 294 -1518 8 688 703 202 120 0 chr17 13559256 13559414 -81713237 - ID_B1 SINE B4 -43 181 5 9 688 25 65 0 0 chr17 13559768 13559814 -81712837 + AT_rich Low_complexity Low_complexity 1 46 0 9 688 1008 156 0 0 chr17 13560634 13560814 -81711837 + (TG)n Simple_repeat Simple_repeat 1 180 0 9 688 1474 220 119 24 chr17 13561830 13562210 -81710441 - MTD LTR MaLR -14 405 2 9 688 377 304 73 58 chr17 13563918 13564021 -81708630 - L1MEd LINE L1 -5454 665 563 9 688 3589 68 57 0 chr17 13564021 13564479 -81708172 - L1Md_F2 LINE L1 -5 6577 6094 9 688 377 304 73 58 chr17 13564479 13564581 -81708070 - L1MEd LINE L1 -5557 562 457 9 688 712 30 20 0 chr17 13564904 13565003 -81707648 + (TG)n Simple_repeat Simple_repeat 1 101 0 9 688 1285 238 145 23 chr17 13565661 13566131 -81706520 + RLTR11A2 LTR ERVK 1 527 0 9 688 656 282 82 27 chr17 13566629 13566848 -81705803 - MTEa LTR MaLR 0 379 149 9 688 261 376 21 28 chr17 13566839 13566984 -81705667 - Tigger5 DNA MER2_type -2224 182 39 9 688 1008 225 33 9 chr17 13567838 13568049 -81704602 + B3 SINE B2 1 216 0 1 688 265 263 48 48 chr17 13569688 13569792 -81702859 + L1MA7 LINE L1 6183 6286 -5 1 688 191 61 0 29 chr17 13569998 13570032 -81702619 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 688 3088 210 99 70 chr17 13570801 13571866 -81700785 - MTC-int LTR MaLR -3 1095 1 1 688 2744 122 27 5 chr17 13571870 13572274 -81700377 - MTC LTR MaLR -8 413 1 1 688 219 235 39 0 chr17 13573464 13573515 -81699136 + (CATA)n Simple_repeat Simple_repeat 2 54 0 1 688 466 329 100 82 chr17 13573519 13573860 -81698791 + ORR1E LTR MaLR 10 356 -3 1 688 260 258 219 6 chr17 13573928 13574111 -81698540 - L1M3a LINE L1 -5143 1241 1122 1 688 301 244 21 43 chr17 13575043 13575137 -81697514 - L1M3a LINE L1 -5788 515 424 1 688 307 345 8 17 chr17 13575239 13575357 -81697294 - L1MB5 LINE L1 -75 6099 5983 1 688 1117 250 161 13 chr17 13575391 13575707 -81696944 + MTE2b LTR MaLR 2 364 -15 1 688 429 76 0 0 chr17 13576030 13576096 -81696555 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 688 812 249 74 60 chr17 13576119 13576388 -81696263 - B4 SINE B4 -19 273 1 1 688 1126 51 0 0 chr17 13576412 13576549 -81696102 + B1_Mus1 SINE Alu 6 142 -6 1 688 236 30 30 0 chr17 13576551 13576584 -81696067 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1 688 727 239 277 9 chr17 13578804 13579024 -81693627 + B4A SINE B4 1 279 -13 1 688 379 157 37 9 chr17 13579314 13579423 -81693228 + (TG)n Simple_repeat Simple_repeat 1 112 0 1 688 644 158 23 17 chr17 13579460 13579634 -81693017 + (TATG)n Simple_repeat Simple_repeat 4 178 0 1 688 313 182 27 27 chr17 13579667 13579814 -81692837 + (TG)n Simple_repeat Simple_repeat 2 148 0 1 688 472 234 6 6 chr17 13581354 13581517 -81691134 + (TG)n Simple_repeat Simple_repeat 2 164 0 1 688 292 252 17 17 chr17 13581490 13581607 -81691044 + (TATATG)n Simple_repeat Simple_repeat 6 122 0 1 688 676 281 44 67 chr17 13581650 13581947 -81690704 - B4A SINE B4 -2 290 1 1 688 537 205 0 0 chr17 13582410 13582537 -81690114 + (TG)n Simple_repeat Simple_repeat 2 128 0 1 688 393 377 45 4 chr17 13583504 13583770 -81688881 + L1MD3 LINE L1 7719 7995 0 1 688 518 277 194 20 chr17 13584270 13584517 -81688134 - B4A SINE B4 -2 290 1 1 688 270 0 0 0 chr17 13584847 13584877 -81687774 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 688 450 0 0 0 chr17 13585288 13585338 -81687313 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 688 311 318 76 34 chr17 13591310 13591482 -81681169 + MER58A DNA MER1_type 16 188 -36 1 688 594 291 13 6 chr17 13591910 13592069 -81680582 - U1 snRNA snRNA -2 163 4 1 688 710 225 70 12 chr17 13592442 13592613 -81680038 + B3 SINE B2 1 181 -35 1 688 243 0 0 0 chr17 13592620 13592647 -81680004 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 688 345 24 0 0 chr17 13592647 13592688 -81679963 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 688 293 234 23 80 chr17 13592705 13592793 -81679858 + MTE2b LTR MaLR 16 98 -281 1 688 2610 131 51 64 chr17 13593363 13593876 -81678775 + RLTR28 LTR ERVL 1 506 -18 1 688 324 329 74 46 chr17 13595919 13596094 -81676557 + HAL1-3A_ME LINE L1 2260 2439 -419 1 688 1430 84 26 0 chr17 13596096 13596286 -81676365 + B2_Mm2 SINE B2 1 195 0 1 688 1077 70 0 0 chr17 13596298 13596441 -81676210 + (GAAA)n Simple_repeat Simple_repeat 4 146 0 1 688 184 175 53 0 chr17 13596442 13596499 -81676152 + GA-rich Low_complexity Low_complexity 1 60 0 1 688 253 361 9 44 chr17 13597653 13597766 -81674885 + Charlie5 DNA MER1_type 1 109 -2515 1 688 747 236 14 0 chr17 13597856 13598000 -81674651 + B1_Mur1 SINE Alu 2 147 -2 1 688 794 241 123 25 chr17 13598279 13598522 -81674129 + B4 SINE B4 1 267 -25 1 688 361 85 0 0 chr17 13599056 13599103 -81673548 - MTD LTR MaLR -8 411 365 1 688 1748 118 137 77 chr17 13599109 13599294 -81673357 + ORR1C1 LTR MaLR 3 163 -215 1 688 603 51 0 0 chr17 13599294 13599373 -81673278 + (TC)n Simple_repeat Simple_repeat 2 80 0 1 688 1748 118 137 77 chr17 13599373 13599537 -81673114 + ORR1C1 LTR MaLR 164 372 -6 1 688 1420 235 56 26 chr17 13599542 13599883 -81672768 - MTD LTR MaLR -66 353 3 1 688 2911 33 0 6 chr17 13601394 13601733 -81670918 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 688 39643 13 1 1 chr17 13601733 13606287 -81666364 - IAPEz-int LTR ERVK 0 6481 1928 1 688 2963 19 5 129 chr17 13606287 13606706 -81665945 + IAPLTR1_Mm LTR ERVK 1 367 0 1 688 8315 69 62 66 chr17 13606706 13608017 -81664634 + IAPEz-int LTR ERVK 8 1313 -5168 1 688 28203 18 1 0 chr17 13608016 13611285 -81661366 + IAPEz-int LTR ERVK 3210 6481 0 1 688 2963 19 5 129 chr17 13611285 13611704 -81660947 + IAPLTR1_Mm LTR ERVK 1 367 0 1 688 15296 42 35 20 chr17 13611704 13613602 -81659049 - IAPEz-int LTR ERVK -4548 1933 8 1 688 2881 36 0 6 chr17 13613602 13613941 -81658710 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 688 989 212 35 0 chr17 13614437 13614635 -81658016 + B3 SINE B2 3 207 -9 1 688 261 252 0 0 chr17 13616845 13616964 -81655687 + (TG)n Simple_repeat Simple_repeat 2 120 0 1 688 246 281 28 46 chr17 13617465 13617573 -81655078 + MER92C LTR ERV1 288 393 -161 1 688 196 340 0 117 chr17 13617794 13617914 -81654737 - L3 LINE CR1 -130 4359 4254 1 688 37202 10 0 0 chr17 13620019 13624898 -81647753 - L1Md_A LINE L1 0 6582 1704 1 688 1010 0 0 0 chr17 13624898 13625005 -81647646 - U6 snRNA snRNA 0 107 1 1 688 907 215 58 24 chr17 13625520 13625725 -81646926 + B4A SINE B4 26 237 -55 1 688 813 89 0 0 chr17 13625857 13625969 -81646682 + B1_Mus2 SINE Alu 23 134 -13 1 688 260 70 0 23 chr17 13625969 13626013 -81646638 + (CAAA)n Simple_repeat Simple_repeat 1 43 0 1 688 237 280 13 39 chr17 13626401 13626479 -81646172 + ID_B1 SINE B4 73 148 -76 1 688 292 250 102 20 chr17 13626421 13626519 -81646132 + PB1D10 SINE Alu 12 117 0 1 688 260 200 0 0 chr17 13626881 13626941 -81645710 + GA-rich Low_complexity Low_complexity 1 60 0 1 688 663 164 50 27 chr17 13626962 13627107 -81645544 + MTD LTR MaLR 261 419 0 1 688 17368 65 47 1 chr17 13627107 13630313 -81642338 + L1VL4 LINE L1 24 3378 -181 1 688 518 225 49 16 chr17 13630313 13630435 -81642216 + B1_Mur2 SINE Alu 18 143 -6 1 688 362 258 9 37 chr17 13630580 13630692 -81641959 + B1F SINE Alu 6 140 -9 1 688 376 225 50 0 chr17 13630710 13630790 -81641861 + BC1_Mm scRNA scRNA 1 84 -68 1 688 350 42 21 0 chr17 13630831 13630879 -81641772 + (GGGA)n Simple_repeat Simple_repeat 3 51 0 1 689 654 13 0 0 chr17 13631608 13631683 -81640968 + (TCCC)n Simple_repeat Simple_repeat 4 78 0 1 689 279 0 0 0 chr17 13632391 13632422 -81640229 + (CTG)n Simple_repeat Simple_repeat 3 33 0 1 689 294 343 37 0 chr17 13633009 13633117 -81639534 + MER34A LTR ERV1 6 117 -454 1 689 545 274 84 115 chr17 13633218 13633635 -81639016 + RMER10A LTR ERVL 18 421 -21 1 689 315 0 0 0 chr17 13634075 13634110 -81638541 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 689 4846 43 12 7 chr17 13634117 13634701 -81637950 + LTRIS_Mus LTR ERV1 1 587 0 1 689 5162 201 78 27 chr17 13634703 13635483 -81637168 - RMER12B LTR ERVK -213 1191 368 1 689 1437 65 16 5 chr17 13635483 13635669 -81636982 + B2_Mm2 SINE B2 2 189 -6 1 689 5162 201 78 27 chr17 13635669 13636022 -81636629 - RMER12B LTR ERVK -1037 367 1 1 689 451 295 98 20 chr17 13636135 13636211 -81636440 + MLT1A LTR MaLR 15 93 -281 1 689 2062 177 16 8 chr17 13636211 13636273 -81636378 - ORR1C1 LTR MaLR 0 378 314 1 689 504 0 0 0 chr17 13636273 13636329 -81636322 + (GA)n Simple_repeat Simple_repeat 2 57 0 1 689 2062 177 16 8 chr17 13636329 13636641 -81636010 - ORR1C1 LTR MaLR -65 313 2 1 689 451 295 98 20 chr17 13636641 13636768 -81635883 + MLT1A LTR MaLR 94 233 -141 1 689 672 302 24 0 chr17 13637135 13637347 -81635304 + L1MA6 LINE L1 3945 4161 -1982 1 689 1653 208 15 80 chr17 13637360 13637767 -81634884 + ORR1B1 LTR MaLR 13 393 -1 1 689 491 268 74 99 chr17 13637780 13637903 -81634748 + L1MA6 LINE L1 4214 4331 -1809 1 689 725 137 65 92 chr17 13637903 13638056 -81634595 + B1_Mur4 SINE Alu 1 149 -1 1 689 723 281 97 110 chr17 13638056 13639564 -81633087 + L1MA6 LINE L1 4332 5826 -474 1 689 2324 146 8 3 chr17 13639705 13640063 -81632588 + RLTR14 LTR ERV1 1 360 -22 1 689 3157 178 20 68 chr17 13640125 13640770 -81631881 + RLTR18 LTR ERVK 1 614 -2 1 689 1631 195 115 8 chr17 13640806 13641179 -81631472 + RMER5 LTR ERV1 122 534 0 1 689 757 224 130 22 chr17 13641897 13642120 -81630531 - ORR1E LTR MaLR -90 289 6 1 689 233 329 72 40 chr17 13642221 13642373 -81630278 - MIRc SINE MIR -84 184 28 1 689 235 250 88 0 chr17 13643069 13643137 -81629514 - MER34A1 LTR ERV1 -79 508 435 1 689 298 329 61 27 chr17 13643180 13643327 -81629324 - MER45B DNA Tip100 -836 204 53 1 689 1961 189 58 5 chr17 13643401 13643800 -81628851 + MTC LTR MaLR 1 420 -1 1 689 762 210 73 31 chr17 13643903 13644095 -81628556 - Lx5 LINE L1 0 7050 6851 1 689 675 226 94 0 chr17 13644081 13644240 -81628411 + Lx5 LINE L1 6565 6738 -312 1 689 313 248 57 107 chr17 13644245 13644367 -81628284 + RSINE1 SINE B4 50 165 0 1 689 1531 143 8 23 chr17 13644375 13644633 -81628018 - ORR1A4 LTR MaLR -8 321 68 1 689 276 333 69 17 chr17 13644744 13644860 -81627791 - PB1 SINE Alu -2 125 4 1 689 2620 52 9 12 chr17 13645104 13645432 -81627219 - ORR1A2 LTR MaLR 0 327 1 1 689 3095 157 18 2 chr17 13646851 13647344 -81625307 + Lx4A LINE L1 6487 6987 -71 1 689 492 340 0 34 chr17 13648975 13649097 -81623554 + B4A SINE B4 149 270 -22 1 689 414 39 0 0 chr17 13649097 13649149 -81623502 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 689 492 340 0 34 chr17 13649149 13649175 -81623476 + B4A SINE B4 271 292 0 1 689 280 234 0 0 chr17 13649247 13649294 -81623357 - ID4_ SINE ID -9 74 28 1 689 180 152 0 0 chr17 13649294 13649327 -81623324 + CT-rich Low_complexity Low_complexity 2 34 0 1 689 1135 68 7 7 chr17 13649343 13649491 -81623160 - B1_Mus1 SINE Alu 0 148 1 1 689 390 314 0 28 chr17 13649574 13649682 -81622969 + ID_B1 SINE B4 81 185 -39 1 689 548 226 9 54 chr17 13649585 13649697 -81622954 + B1_Mur1 SINE Alu 11 117 -3 1 689 771 227 19 67 chr17 13650473 13650681 -81621970 + B3A SINE B2 1 198 0 1 689 1342 74 23 0 chr17 13650764 13650939 -81621712 + B2_Mm2 SINE B2 3 181 -14 1 689 1831 128 63 103 chr17 13651029 13651456 -81621195 + RMER17C LTR ERVK 1 410 0 1 689 1050 90 14 0 chr17 13652164 13652309 -81620342 - B1_Mus1 SINE Alu 0 148 2 2 689 329 232 101 40 chr17 13652507 13652606 -81620045 + RMER1B Other Other 11 115 -951 2 689 3989 133 56 25 chr17 13652606 13653326 -81619325 + RMER12 LTR ERVK 1 934 -388 2 689 597 28 0 0 chr17 13653326 13653397 -81619254 + (TC)n Simple_repeat Simple_repeat 2 72 0 2 689 228 35 0 0 chr17 13653397 13653425 -81619226 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 689 1072 229 200 121 chr17 13653425 13653751 -81618900 + RMER12 LTR ERVK 935 1280 -42 2 689 4257 180 93 22 chr17 13653796 13654690 -81617961 + RMER1B Other Other 110 1066 0 2 689 270 272 71 71 chr17 13654972 13655071 -81617580 - MLT1A0 LTR MaLR 0 365 267 2 689 1108 310 197 66 chr17 13655048 13655874 -81616777 + MLT-int LTR MaLR 74 1008 -727 2 689 278 163 20 0 chr17 13656139 13656188 -81616463 + RLTR14 LTR ERV1 314 363 -19 2 689 1251 233 128 9 chr17 13657125 13657445 -81615206 - ORR1E LTR MaLR 0 359 2 2 689 228 35 0 0 chr17 13658366 13658395 -81614256 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 689 547 264 66 19 chr17 13659381 13659577 -81613074 - MTD LTR MaLR -1 420 221 2 689 229 195 65 65 chr17 13659530 13659623 -81613028 - LTR50 LTR ERVL -347 448 356 2 689 264 113 0 36 chr17 13659624 13659679 -81612972 + Lx5 LINE L1 6998 7050 0 2 689 454 213 0 100 chr17 13659744 13659761 -81612890 + MT2B LTR ERVL 151 155 -446 2 689 796 159 0 0 chr17 13659761 13659887 -81612764 + B1_Mm SINE Alu 1 126 -21 2 689 911 96 0 7 chr17 13659894 13660031 -81612620 + (GGAGAA)n Simple_repeat Simple_repeat 3 138 0 2 689 186 43 0 0 chr17 13660111 13660134 -81612517 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 689 820 266 57 107 chr17 13660139 13660291 -81612360 - MTD LTR MaLR -134 285 124 2 689 873 0 0 0 chr17 13660291 13660388 -81612263 + (GAAA)n Simple_repeat Simple_repeat 3 99 0 2 689 414 0 0 0 chr17 13660388 13660433 -81612218 + (GGGA)n Simple_repeat Simple_repeat 4 49 0 2 689 820 266 57 107 chr17 13660433 13660578 -81612073 - MTD LTR MaLR -296 123 3 2 689 189 0 0 0 chr17 13660968 13660989 -81611662 + (TTG)n Simple_repeat Simple_repeat 3 23 0 2 689 764 213 0 0 chr17 13661761 13661902 -81610749 - B1_Mur4 SINE Alu -8 142 2 2 689 4250 155 50 1 chr17 13662606 13663299 -81609352 + RMER1A Other Other 304 1030 0 2 689 234 225 53 66 chr17 13665552 13665628 -81607023 + B4 SINE B4 119 193 -99 2 689 182 312 0 0 chr17 13665758 13665806 -81606845 - L2c LINE L2 -165 3222 3175 2 689 996 142 58 27 chr17 13668207 13668395 -81604256 + B2_Mm2 SINE B2 2 195 0 2 689 340 306 40 16 chr17 13668458 13668670 -81603981 + L1M5 LINE L1 2579 2795 -3351 2 689 243 290 14 42 chr17 13668670 13668742 -81603909 + ID4 SINE ID 5 74 -9 2 689 329 313 52 45 chr17 13668934 13669088 -81603563 - MLT1D LTR MaLR -86 419 265 2 689 1030 91 12 24 chr17 13669376 13669545 -81603106 - Lx3_Mus LINE L1 0 7009 6843 2 689 3168 38 0 0 chr17 13669545 13669937 -81602714 + Lx3_Mus LINE L1 6476 6867 -142 2 689 288 0 0 0 chr17 13670003 13670035 -81602616 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 689 225 264 82 36 chr17 13670677 13670787 -81601864 + L1M5 LINE L1 4184 4298 -1848 2 689 3111 46 8 5 chr17 13670913 13671308 -81601343 + MTA_Mm LTR MaLR 1 396 0 2 689 321 26 0 0 chr17 13671397 13671435 -81601216 + (GA)n Simple_repeat Simple_repeat 2 39 0 2 689 218 119 0 23 chr17 13671685 13671728 -81600923 + (CAAAAA)n Simple_repeat Simple_repeat 5 46 0 2 689 198 0 0 0 chr17 13671728 13671750 -81600901 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 689 207 0 0 0 chr17 13672871 13672894 -81599757 + (G)n Simple_repeat Simple_repeat 1 23 0 2 689 235 300 11 0 chr17 13673264 13673354 -81599297 - L1_Mur3 LINE L1 -4292 1588 1498 2 689 251 362 93 6 chr17 13673785 13673946 -81598705 + ORR1E LTR MaLR 1 175 -184 2 689 517 195 22 33 chr17 13673978 13674158 -81598493 + CT-rich Low_complexity Low_complexity 3 180 0 2 689 733 139 0 0 chr17 13675599 13675714 -81596937 - RLTR1B-int LTR ERV1 -161 4902 4788 2 689 1153 186 22 20 chr17 13675823 13676211 -81596440 - RLTR1B-int LTR ERV1 -486 2813 2669 2 689 4057 76 66 109 chr17 13676203 13676928 -81595723 - RLTR1B-int LTR ERV1 -746 2553 1860 2 689 4410 154 76 26 chr17 13676919 13678311 -81594340 - RLTR1B-int LTR ERV1 -3216 1847 835 2 689 3447 134 138 16 chr17 13678315 13678953 -81593698 - RMER16-int LTR ERVK -3988 1418 703 2 689 216 0 0 0 chr17 13678953 13678977 -81593674 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 2 689 839 114 73 42 chr17 13678977 13679142 -81593509 - RMER16-int LTR ERVK -5096 310 141 2 689 725 117 45 3 chr17 13679489 13679660 -81592991 - RLTR1B-int LTR ERV1 -3006 293 63 2 689 4230 48 16 8 chr17 13679805 13680313 -81592338 - LTRIS3 LTR ERV1 0 512 1 2 689 1296 199 116 74 chr17 13681292 13681628 -81591023 + MTD LTR MaLR 5 354 -65 2 689 450 0 0 0 chr17 13681733 13681783 -81590868 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 689 624 305 91 52 chr17 13681950 13682258 -81590393 - ORR1E LTR MaLR -17 342 23 2 689 265 254 153 38 chr17 13682570 13682701 -81589950 + RMER15 LTR ERVL 430 575 0 2 689 1987 132 25 6 chr17 13684111 13684432 -81588219 + ORR1A4 LTR MaLR 3 329 0 2 689 468 300 210 25 chr17 13684702 13684945 -81587706 + B4A SINE B4 2 289 -3 2 689 531 0 0 0 chr17 13684945 13685004 -81587647 + (GA)n Simple_repeat Simple_repeat 2 60 0 2 689 633 288 97 18 chr17 13685058 13685284 -81587367 - MLT1B LTR MaLR -146 244 1 2 689 490 299 34 14 chr17 13686896 13687077 -81585574 - MER57C2 LTR ERV1 -170 241 48 2 689 217 271 135 36 chr17 13687451 13687562 -81585089 - BC1_Mm scRNA scRNA -24 128 7 2 689 256 207 0 17 chr17 13687560 13687619 -81585032 - AluF_3 SINE Alu -117 194 137 2 689 599 196 0 43 chr17 13689553 13689670 -81582981 + B1_Mur3 SINE Alu 38 149 0 2 689 339 181 0 0 chr17 13689712 13689784 -81582867 + (CACAA)n Simple_repeat Simple_repeat 3 74 0 2 689 300 27 0 0 chr17 13689894 13689931 -81582720 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 689 512 268 61 30 chr17 13689935 13690066 -81582585 - B3A SINE B2 -51 147 13 2 689 2354 154 30 15 chr17 13690067 13690468 -81582183 + MTB_Mm LTR MaLR 1 407 0 2 689 353 357 13 25 chr17 13690484 13690642 -81582009 + MER53 DNA hAT 37 192 -1 2 689 336 127 0 0 chr17 13690770 13690825 -81581826 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 689 3106 70 25 0 chr17 13690825 13691226 -81581425 - RLTR10A LTR ERVK 0 411 1 2 689 5018 60 25 14 chr17 13691226 13691918 -81580733 - RLTR10-int LTR ERVK -1 1986 1288 2 689 1525 83 5 5 chr17 13691919 13692137 -81580514 - IAP-d-int LTR ERVK -658 5884 5667 2 689 3315 65 100 15 chr17 13692141 13692622 -81580029 - IAP-d-int LTR ERVK -1015 5527 5006 2 689 1898 139 12 73 chr17 13692623 13693114 -81579537 - IAP-d-int LTR ERVK -1385 602 295 2 689 3019 69 45 18 chr17 13693114 13693514 -81579137 - RLTR10A LTR ERVK 0 411 1 2 689 2733 72 56 3 chr17 13693657 13694049 -81578602 + BGLII LTR ERVK 9 421 0 2 689 260 311 33 0 chr17 13694240 13694330 -81578321 - PB1D10 SINE Alu 0 117 25 2 689 582 261 36 0 chr17 13694471 13694609 -81578042 - B1F SINE Alu -6 143 1 2 689 865 75 142 0 chr17 13694708 13694828 -81577823 + B1_Mm SINE Alu 2 138 -9 2 689 665 286 6 12 chr17 13694843 13695013 -81577638 + B3 SINE B2 48 216 0 2 689 615 244 49 53 chr17 13695188 13695414 -81577237 - MTE2a LTR MaLR 0 419 207 2 689 995 155 171 0 chr17 13695898 13696079 -81576572 + B3 SINE B2 1 212 -4 2 689 618 151 0 0 chr17 13696404 13696510 -81576141 + GA-rich Low_complexity Low_complexity 2 107 0 2 689 273 193 129 24 chr17 13696510 13696595 -81576056 + L1M2 LINE L1 4149 4242 -1901 2 689 979 262 5 5 chr17 13697038 13697249 -81575402 - B4 SINE B4 0 292 82 2 689 473 47 0 15 chr17 13697269 13697334 -81575317 + (TTCC)n Simple_repeat Simple_repeat 1 64 0 2 689 334 284 41 31 chr17 13697334 13697345 -81575306 - B4 SINE B4 -190 102 94 2 689 537 176 127 67 chr17 13697345 13697479 -81575172 - B1_Mur4 SINE Alu -8 142 1 2 689 334 284 41 31 chr17 13697479 13697565 -81575086 - B4 SINE B4 -199 93 4 2 689 512 259 64 12 chr17 13697643 13697815 -81574836 - Charlie1a DNA MER1_type -235 1220 1040 2 689 293 297 11 0 chr17 13697910 13698001 -81574650 + L1MC LINE L1 5715 5806 -2076 2 689 203 175 25 0 chr17 13698237 13698277 -81574374 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 689 2243 172 114 86 chr17 13698983 13699303 -81573348 + RLTR31_Mm LTR ERVK 1 321 -240 2 689 1034 94 43 0 chr17 13699303 13699441 -81573210 + B1_Mus2 SINE Alu 2 145 -2 2 689 2243 172 114 86 chr17 13699441 13699666 -81572985 + RLTR31_Mm LTR ERVK 322 561 0 2 689 968 245 102 47 chr17 13700041 13700384 -81572267 + MTE2b LTR MaLR 8 369 -10 2 689 180 125 0 0 chr17 13701661 13701693 -81570958 + (GGGTG)n Simple_repeat Simple_repeat 1 32 0 2 689 495 0 0 0 chr17 13701900 13701955 -81570696 + (TC)n Simple_repeat Simple_repeat 2 56 0 2 689 620 244 130 6 chr17 13702822 13702983 -81569668 + MTE2a LTR MaLR 199 379 0 2 689 560 239 0 8 chr17 13703803 13703921 -81568730 + PB1D9 SINE Alu 3 119 -1 2 689 844 176 10 29 chr17 13704201 13704515 -81568136 + (TGGA)n Simple_repeat Simple_repeat 1 308 0 2 689 887 249 149 17 chr17 13704546 13704776 -81567875 + MTEa LTR MaLR 1 250 -129 2 689 347 45 61 0 chr17 13704776 13704842 -81567809 + (TGGA)n Simple_repeat Simple_repeat 1 70 0 2 689 887 249 149 17 chr17 13704842 13704913 -81567738 + MTEa LTR MaLR 251 341 -38 2 689 1092 76 21 0 chr17 13705268 13705412 -81567239 - B1_Mus2 SINE Alu 0 147 1 2 689 1131 89 0 0 chr17 13706082 13706228 -81566423 - B1_Mus2 SINE Alu 0 147 2 2 689 375 41 0 0 chr17 13707156 13707205 -81565446 + (GA)n Simple_repeat Simple_repeat 2 50 0 2 689 1880 232 53 135 chr17 13707277 13707885 -81564766 - RLTR1D LTR ERV1 0 605 48 2 689 431 176 35 0 chr17 13708626 13708711 -81563940 - MLT1D LTR MaLR -16 489 402 2 689 230 211 0 0 chr17 13708718 13708756 -81563895 + polypyrimidine Low_complexity Low_complexity 2 39 0 2 689 443 230 151 67 chr17 13708801 13708951 -81563700 - L1_Mur3 LINE L1 -347 5533 5373 2 689 555 16 0 0 chr17 13708951 13709015 -81563636 + (TA)n Simple_repeat Simple_repeat 1 64 0 2 689 443 230 151 67 chr17 13709015 13709148 -81563503 - L1_Mur3 LINE L1 -508 5372 5227 2 689 1009 131 7 0 chr17 13709215 13709360 -81563291 - B1_Mus2 SINE Alu -1 146 1 2 689 518 0 16 0 chr17 13712959 13713021 -81559630 + (TG)n Simple_repeat Simple_repeat 1 63 0 2 689 219 69 0 0 chr17 13713053 13713082 -81559569 + (GGGA)n Simple_repeat Simple_repeat 3 31 0 2 689 237 307 156 74 chr17 13713135 13713392 -81559259 - B4 SINE B4 -14 278 1 2 689 247 307 27 0 chr17 13713425 13713500 -81559151 + Charlie1 DNA MER1_type 773 849 -1932 2 689 1114 271 106 74 chr17 13713500 13713974 -81558677 - RLTR19 LTR ERVK -1 498 10 3 689 254 228 40 0 chr17 13714414 13714515 -81558136 + (TG)n Simple_repeat Simple_repeat 2 106 0 3 689 231 61 0 0 chr17 13714552 13714585 -81558066 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 689 207 307 13 0 chr17 13714613 13714688 -81557963 + (TG)n Simple_repeat Simple_repeat 1 76 0 3 689 7139 164 50 28 chr17 13714770 13716816 -81555835 - Lx5 LINE L1 0 7050 4958 3 689 767 141 65 22 chr17 13716952 13716971 -81555680 - B1_Mur3 SINE Alu -3 146 130 3 689 222 62 0 0 chr17 13716971 13717003 -81555648 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 3 689 767 141 65 22 chr17 13717003 13717121 -81555530 - B1_Mur3 SINE Alu -20 129 3 3 689 974 116 7 33 chr17 13717377 13717390 -81555261 - B1_Mus1 SINE Alu 0 148 140 3 689 253 0 54 0 chr17 13717390 13717427 -81555224 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 689 974 116 7 33 chr17 13717427 13717565 -81555086 - B1_Mus1 SINE Alu -9 139 1 3 689 1027 284 148 63 chr17 13717590 13718192 -81554459 - Lx8 LINE L1 -4 7469 6817 3 689 379 262 119 65 chr17 13718233 13718527 -81554124 - L1_Mur3 LINE L1 -345 5535 5226 3 689 1019 111 14 0 chr17 13718593 13718737 -81553914 - B1_Mus2 SINE Alu -1 146 1 3 689 252 0 0 0 chr17 13720619 13720647 -81552004 + (TATATG)n Simple_repeat Simple_repeat 1 28 0 3 689 236 232 0 42 chr17 13720762 13720834 -81551817 + GA-rich Low_complexity Low_complexity 3 71 0 3 689 297 247 0 0 chr17 13722135 13722216 -81550435 + (TG)n Simple_repeat Simple_repeat 2 82 0 3 689 267 333 51 61 chr17 13722250 13722464 -81550187 - MTEa-int LTR MaLR -1368 212 1 3 689 242 262 45 45 chr17 13722464 13722548 -81550103 - MTEa LTR MaLR -18 361 278 3 689 3015 40 14 0 chr17 13722589 13722941 -81549710 + IAPEY2_LTR LTR ERVK 1 357 0 3 689 323 344 0 0 chr17 13723191 13723281 -81549370 + PB1D10 SINE Alu 23 112 -5 3 689 252 0 0 0 chr17 13725446 13725474 -81547177 + (CTCTG)n Simple_repeat Simple_repeat 4 31 0 3 689 339 324 176 0 chr17 13725778 13725914 -81546737 - L1M4 LINE L1 -1564 4582 4423 3 689 216 0 0 0 chr17 13725963 13725987 -81546664 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 3 689 4022 185 78 23 chr17 13725987 13726741 -81545910 - Lx2B LINE L1 -32 6968 6160 3 689 288 0 0 0 chr17 13726741 13726773 -81545878 + (CCA)n Simple_repeat Simple_repeat 2 33 0 3 689 4022 185 78 23 chr17 13726773 13726929 -81545722 - Lx2B LINE L1 -841 6159 6008 3 689 652 151 9 0 chr17 13726929 13727035 -81545616 - U6 snRNA snRNA 0 107 1 3 689 654 117 11 0 chr17 13727036 13727130 -81545521 - MTC LTR MaLR -326 95 1 3 689 268 268 198 39 chr17 13727213 13727411 -81545240 - MIRb SINE MIR -40 228 4 3 689 357 62 0 0 chr17 13727439 13727487 -81545164 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 689 1684 208 131 11 chr17 13728660 13729034 -81543617 + MTD LTR MaLR 1 419 0 3 689 296 308 134 99 chr17 13730452 13730745 -81541906 - MLT1F LTR MaLR 0 489 182 3 689 272 253 0 13 chr17 13730996 13731072 -81541579 - MLT1A1 LTR MaLR -1 407 333 3 689 426 257 115 65 chr17 13731932 13732132 -81540519 + B3 SINE B2 4 213 -3 3 689 602 209 9 9 chr17 13732151 13732262 -81540389 + PB1D7 SINE Alu 9 119 -1 3 689 548 158 9 0 chr17 13732381 13732495 -81540156 + CT-rich Low_complexity Low_complexity 1 115 0 3 689 452 232 6 30 chr17 13732505 13732674 -81539977 + C-rich Low_complexity Low_complexity 1 165 0 3 689 316 287 90 27 chr17 13732675 13732786 -81539865 - HAL1-3A_ME LINE L1 -67 2791 2674 3 689 224 156 24 61 chr17 13732794 13732876 -81539775 + C-rich Low_complexity Low_complexity 2 80 0 3 689 222 37 0 0 chr17 13733019 13733046 -81539605 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 689 578 114 0 20 chr17 13733046 13733144 -81539507 + (CATATA)n Simple_repeat Simple_repeat 4 99 0 3 689 835 267 49 111 chr17 13734262 13734569 -81538082 + MTEa LTR MaLR 1 288 -91 3 689 1346 117 80 28 chr17 13734569 13734781 -81537870 + URR1A DNA MER1_type 1 223 -3 3 689 521 169 11 55 chr17 13734928 13735208 -81537443 + C-rich Low_complexity Low_complexity 1 267 0 3 689 479 271 0 0 chr17 13735444 13735540 -81537111 + B1_Mus2 SINE Alu 51 146 -1 3 689 2620 142 35 0 chr17 13736858 13737289 -81535362 + RLTR11B LTR ERVK 8 453 0 3 689 889 272 109 70 chr17 13737342 13737701 -81534950 - MTE2a LTR MaLR 0 379 7 3 689 509 258 45 0 chr17 13738371 13738503 -81534148 - ID_B1 SINE B4 -9 215 78 3 689 224 290 29 0 chr17 13738718 13738787 -81533864 + ID2 SINE ID 2 72 -11 3 689 519 95 0 0 chr17 13738924 13738998 -81533653 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 3 689 1346 74 20 59 chr17 13739001 13739203 -81533448 - B2_Mm2 SINE B2 0 195 2 3 689 215 258 100 30 chr17 13739505 13739605 -81533046 - L3 LINE CR1 -1610 2879 2773 3 689 317 236 55 8 chr17 13740085 13740185 -81532466 + B1_Mur2 SINE Alu 2 134 -15 3 689 228 143 89 0 chr17 13740191 13740247 -81532404 - RMER4B LTR ERVK -6 579 519 3 689 841 128 0 23 chr17 13740231 13740359 -81532292 - RMER4B LTR ERVK -428 157 33 3 689 180 0 0 0 chr17 13740359 13740379 -81532272 + (GTTTG)n Simple_repeat Simple_repeat 2 21 0 3 689 215 31 31 0 chr17 13740377 13740409 -81532242 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 3 689 249 340 28 0 chr17 13740476 13740582 -81532069 + L1MEc LINE L1 2302 2410 -3990 3 689 300 304 25 82 chr17 13741494 13741554 -81531097 + PB1D10 SINE Alu 3 55 -62 3 689 2423 146 60 5 chr17 13741554 13741953 -81530698 + MTC LTR MaLR 1 421 0 3 689 300 304 25 82 chr17 13741953 13742014 -81530637 + PB1D10 SINE Alu 56 117 0 3 689 393 261 63 56 chr17 13742018 13742160 -81530491 + B1F SINE Alu 1 143 -6 3 689 401 327 164 14 chr17 13742246 13742460 -81530191 + L1MEc LINE L1 2452 2697 -3622 3 689 339 294 71 63 chr17 13742595 13742849 -81529802 + L1MEc LINE L1 2853 3108 -3211 3 689 260 355 27 27 chr17 13742884 13742994 -81529657 + Tigger5 DNA MER2_type 15 124 -2282 3 689 1256 18 48 0 chr17 13743531 13744384 -81528267 + (CTGTG)n Simple_repeat Simple_repeat 1 893 0 3 689 1144 31 46 0 chr17 13744407 13745010 -81527641 + (CTGTG)n Simple_repeat Simple_repeat 1 630 0 3 689 1226 14 44 2 chr17 13745024 13745658 -81526993 + (CTGTG)n Simple_repeat Simple_repeat 1 660 0 3 689 1219 12 47 0 chr17 13745671 13746078 -81526573 + (CTGTG)n Simple_repeat Simple_repeat 1 426 0 3 689 1981 183 94 3 chr17 13746363 13746747 -81525904 + MTD LTR MaLR 1 419 0 3 689 374 0 22 0 chr17 13747290 13747336 -81525315 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 689 321 26 0 0 chr17 13748407 13748445 -81524206 + (GA)n Simple_repeat Simple_repeat 2 39 0 3 689 265 62 14 58 chr17 13749640 13749709 -81522942 + (TTTTG)n Simple_repeat Simple_repeat 5 70 0 3 689 243 0 0 0 chr17 13750193 13750220 -81522431 + (T)n Simple_repeat Simple_repeat 1 27 0 3 689 908 76 0 0 chr17 13750220 13750339 -81522312 - B1_Mus1 SINE Alu 0 148 30 3 689 1331 63 20 36 chr17 13750368 13750564 -81522087 + B2_Mm1t SINE B2 1 193 0 3 689 1258 95 0 6 chr17 13750907 13751077 -81521574 + B2_Mm2 SINE B2 3 171 -24 3 689 787 226 0 20 chr17 13751625 13751774 -81520877 + B1_Mur2 SINE Alu 2 147 -2 3 689 564 15 0 0 chr17 13751788 13751853 -81520798 + (GAGAA)n Simple_repeat Simple_repeat 2 66 0 3 689 1019 122 78 156 chr17 13752874 13753117 -81519534 - URR1A DNA MER1_type -2 224 1 3 689 327 266 0 0 chr17 13754551 13754664 -81517987 + (CA)n Simple_repeat Simple_repeat 1 113 0 3 689 316 273 12 0 chr17 13755100 13755265 -81517386 + (CTCA)n Simple_repeat Simple_repeat 4 170 0 3 689 316 337 30 12 chr17 13755296 13755464 -81517187 + (CTCA)n Simple_repeat Simple_repeat 1 171 0 3 689 674 181 41 0 chr17 13755647 13755818 -81516833 + Lx3A LINE L1 6798 6975 -6 3 689 186 71 0 0 chr17 13755901 13755929 -81516722 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 3 689 587 168 26 9 chr17 13756100 13756214 -81516437 + RLTR15 LTR ERVK 1 116 -243 3 690 497 44 15 0 chr17 13806619 13806687 -81465964 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 690 281 371 185 16 chr17 13806709 13806826 -81465825 - B4A SINE B4 0 292 134 3 690 282 81 0 0 chr17 13806826 13806863 -81465788 + RMER17C LTR ERVK 1 37 -373 3 690 281 371 185 16 chr17 13806863 13806958 -81465693 - B4A SINE B4 0 133 2 3 690 432 0 0 0 chr17 13807449 13807497 -81465154 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 690 233 362 128 28 chr17 13808044 13808294 -81464357 + MLT1A0 LTR MaLR 87 361 -4 3 690 611 233 115 12 chr17 13808330 13808495 -81464156 + B4A SINE B4 49 230 -62 3 690 226 258 62 73 chr17 13808493 13808589 -81464062 + B3 SINE B2 122 216 0 3 690 454 288 114 20 chr17 13809268 13809423 -81463228 + ORR1E LTR MaLR 1 171 -188 3 690 2571 170 58 43 chr17 13809482 13810035 -81462616 - RLTR31_Mm LTR ERVK 0 561 1 3 690 321 283 92 52 chr17 13810118 13810271 -81462380 + RSINE1 SINE B4 4 162 -3 3 690 393 102 0 0 chr17 13810285 13810344 -81462307 + (TG)n Simple_repeat Simple_repeat 1 59 0 3 690 709 284 8 95 chr17 13810352 13810605 -81462046 - B4 SINE B4 -21 271 41 3 690 1796 63 137 47 chr17 13810622 13810922 -81461729 - ORR1A2 LTR MaLR 0 327 1 3 690 1089 235 100 18 chr17 13811993 13812323 -81460328 + ORR1E LTR MaLR 1 357 -2 3 690 610 188 0 0 chr17 13812381 13812482 -81460169 + U6 snRNA snRNA 2 102 -5 3 690 204 40 0 0 chr17 13812483 13812508 -81460143 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 690 1154 126 39 0 chr17 13813087 13813115 -81459536 - B2_Mm2 SINE B2 -6 189 161 3 690 219 36 0 0 chr17 13813115 13813143 -81459508 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 3 690 1154 126 39 0 chr17 13813143 13813296 -81459355 - B2_Mm2 SINE B2 -35 160 2 3 690 432 0 0 0 chr17 13813439 13813487 -81459164 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 690 296 242 13 143 chr17 13814132 13814209 -81458442 - tRNA-Ala-GCY_ tRNA tRNA -7 68 2 3 690 423 0 0 0 chr17 13814211 13814258 -81458393 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 690 391 233 83 7 chr17 13814266 13814381 -81458270 - PB1 SINE Alu -2 125 3 3 690 192 40 0 0 chr17 13814502 13814527 -81458124 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 3 690 222 37 0 0 chr17 13814768 13814795 -81457856 + (GGGGA)n Simple_repeat Simple_repeat 5 31 0 3 690 255 311 0 62 chr17 13814800 13814930 -81457721 + GA-rich Low_complexity Low_complexity 6 127 0 3 690 1221 80 6 0 chr17 13815749 13815911 -81456740 - B2_Mm2 SINE B2 -30 165 3 3 690 2338 8 0 11 chr17 13815916 13816266 -81456385 - L1Md_T LINE L1 0 6582 6320 3 690 538 276 42 69 chr17 13816275 13816610 -81456041 + L1M2 LINE L1 4509 4834 -1309 4 690 438 20 0 0 chr17 13816662 13816713 -81455938 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 4 690 488 278 144 41 chr17 13817370 13817565 -81455086 + B4A SINE B4 76 290 -2 4 690 29 0 0 25 chr17 13818504 13818522 -81454129 + AT_rich Low_complexity Low_complexity 1 18 0 4 690 1235 61 0 0 chr17 13818522 13818670 -81453981 + B1_Mus1 SINE Alu 1 148 0 4 690 29 0 0 25 chr17 13818670 13818691 -81453960 + AT_rich Low_complexity Low_complexity 1 21 0 4 690 369 0 0 0 chr17 13818691 13818732 -81453919 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 690 369 43 0 0 chr17 13818732 13818779 -81453872 + (GA)n Simple_repeat Simple_repeat 1 47 0 4 690 399 265 128 0 chr17 13818786 13818903 -81453748 - B3A SINE B2 -13 185 54 4 690 788 300 21 25 chr17 13818934 13819173 -81453478 + B4A SINE B4 11 248 -44 4 690 240 316 71 90 chr17 13821931 13821984 -81450667 + B3 SINE B2 6 109 -107 4 690 388 208 45 90 chr17 13821984 13822032 -81450619 + B4A SINE B4 184 228 -64 4 690 702 225 28 14 chr17 13822032 13822176 -81450475 + B1_Mur1 SINE Alu 2 147 -2 4 690 388 208 45 90 chr17 13822176 13822238 -81450413 + B4A SINE B4 229 289 -3 4 690 240 316 71 90 chr17 13822238 13822286 -81450365 + B3 SINE B2 110 213 -3 4 690 1168 235 182 8 chr17 13822282 13822635 -81450016 + MTD LTR MaLR 10 419 0 4 690 27 0 0 0 chr17 13825114 13825141 -81447510 + AT_rich Low_complexity Low_complexity 1 27 0 4 690 980 142 7 20 chr17 13825141 13825292 -81447359 - B1_Mur3 SINE Alu 0 149 1 4 690 180 0 0 0 chr17 13825629 13825649 -81447002 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 4 690 296 327 9 28 chr17 13825877 13825984 -81446667 - MER34 LTR ERV1 -67 475 371 4 690 1277 33 0 0 chr17 13826455 13826606 -81446045 + B2_Mm2 SINE B2 2 152 -43 4 690 1202 54 0 20 chr17 13826889 13827040 -81445611 + B1_Mus1 SINE Alu 1 148 0 4 690 2072 104 19 19 chr17 13827113 13827435 -81445216 + ORR1A4 LTR MaLR 1 322 -7 4 690 269 160 60 0 chr17 13827436 13827486 -81445165 + B1_Mur1 SINE Alu 96 148 -1 4 690 260 200 0 0 chr17 13828900 13828965 -81443686 + G-rich Low_complexity Low_complexity 1 65 0 4 690 222 118 0 0 chr17 13830124 13830158 -81442493 + (TTTTG)n Simple_repeat Simple_repeat 4 37 0 4 690 246 62 0 0 chr17 13830630 13830662 -81441989 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4 690 468 250 0 0 chr17 13830683 13830771 -81441880 - B1_Mur1 SINE Alu -10 139 52 4 690 279 312 67 45 chr17 13830771 13830817 -81441834 - ID_B1 SINE B4 -10 214 78 4 690 831 143 70 14 chr17 13830922 13831064 -81441587 + B1_Mur4 SINE Alu 1 150 0 4 690 198 0 0 0 chr17 13831076 13831098 -81441553 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 4 690 1279 108 11 0 chr17 13832631 13832817 -81439834 + B2_Mm1t SINE B2 2 189 -4 4 690 245 294 33 0 chr17 13833230 13833322 -81439329 + L1MD LINE L1 3956 4050 -2096 4 690 272 261 125 44 chr17 13833359 13833495 -81439156 + L1MC1 LINE L1 5682 5828 -505 4 690 1193 69 51 11 chr17 13833496 13833644 -81439007 + B2_Mm1a SINE B2 1 156 -37 4 690 192 77 0 0 chr17 13833644 13833670 -81438981 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 4 690 1193 69 51 11 chr17 13833670 13833696 -81438955 + B2_Mm1a SINE B2 157 181 -12 4 690 1415 71 16 0 chr17 13833737 13833920 -81438731 - B2_Mm1t SINE B2 -6 187 2 4 690 1189 96 79 0 chr17 13834058 13834213 -81438438 + B2_Mm1a SINE B2 2 160 -33 4 690 423 0 0 0 chr17 13834213 13834260 -81438391 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 4 690 1189 96 79 0 chr17 13834260 13834282 -81438369 + B2_Mm1a SINE B2 161 192 -1 4 690 2903 165 34 29 chr17 13834448 13834972 -81437679 - RMER5 LTR ERV1 -7 527 1 4 690 250 200 119 48 chr17 13835174 13835258 -81437393 + L1MC1 LINE L1 6111 6200 -133 4 690 960 239 72 40 chr17 13835261 13835592 -81437059 + RLTR20A1 LTR ERVK 1 453 -98 4 690 324 0 0 0 chr17 13835592 13835628 -81437023 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 690 527 235 77 13 chr17 13835628 13835716 -81436935 + RLTR20A1 LTR ERVK 454 550 -1 4 690 397 226 37 19 chr17 13835736 13835844 -81436807 + L1MC1 LINE L1 6224 6333 0 4 690 463 279 81 0 chr17 13835851 13835987 -81436664 + RSINE1 SINE B4 5 151 -14 4 690 1256 34 7 0 chr17 13836138 13836284 -81436367 - B1_Mus1 SINE Alu 0 148 2 4 690 1280 96 43 5 chr17 13838352 13838540 -81434111 - B2_Mm2 SINE B2 0 195 1 4 690 208 325 13 0 chr17 13839188 13839265 -81433386 + (TG)n Simple_repeat Simple_repeat 1 78 0 4 690 840 278 53 28 chr17 13839267 13839456 -81433195 - B4A SINE B4 0 292 109 4 690 567 43 0 0 chr17 13839456 13839526 -81433125 + (CA)n Simple_repeat Simple_repeat 1 70 0 4 690 840 278 53 28 chr17 13839526 13839621 -81433030 - B4A SINE B4 -184 108 1 4 690 297 323 83 34 chr17 13840836 13841041 -81431610 - L1M5 LINE L1 -348 5816 5602 4 690 368 274 78 31 chr17 13841325 13841453 -81431198 + RMER10B LTR ERVL 258 391 -7 4 690 261 139 0 0 chr17 13841453 13841496 -81431155 + (A)n Simple_repeat Simple_repeat 1 43 0 4 690 628 80 11 0 chr17 13841820 13841908 -81430743 + B1_Mus2 SINE Alu 59 147 0 4 690 202 329 13 0 chr17 13842115 13842194 -81430457 + (TGAA)n Simple_repeat Simple_repeat 1 80 0 4 690 1138 273 38 49 chr17 13842467 13842914 -81429737 + ERVL-B4-int LTR ERVL 4747 5188 -526 4 690 248 194 49 111 chr17 13842990 13843071 -81429580 - Tigger5 DNA MER2_type -7 2399 2324 4 690 340 346 11 134 chr17 13843066 13843253 -81429398 + ID_B1 SINE B4 11 174 -50 4 690 229 307 56 118 chr17 13843177 13843321 -81429330 + 7SLRNA srpRNA srpRNA 17 151 -163 4 690 231 36 0 0 chr17 13844119 13844147 -81428504 + (TTA)n Simple_repeat Simple_repeat 3 30 0 4 690 700 277 42 65 chr17 13844149 13844458 -81428193 - RMER10A LTR ERVL -140 302 1 4 690 263 325 104 57 chr17 13844862 13845159 -81427492 + MLT2C1 LTR ERVL 67 377 -20 4 690 231 108 62 0 chr17 13845796 13845861 -81426790 + (TTTG)n Simple_repeat Simple_repeat 1 69 0 4 690 192 135 0 0 chr17 13845857 13845894 -81426757 + (TTG)n Simple_repeat Simple_repeat 1 37 0 4 690 690 209 22 0 chr17 13845894 13846028 -81426623 - B1_Mur2 SINE Alu -2 147 11 4 690 437 276 65 36 chr17 13845914 13846053 -81426598 - B4 SINE B4 -80 212 70 4 690 916 94 8 0 chr17 13847260 13847388 -81425263 + B1_Mus2 SINE Alu 3 131 -16 4 690 479 122 11 0 chr17 13847392 13847482 -81425169 + (GGAA)n Simple_repeat Simple_repeat 3 93 0 4 690 438 123 0 12 chr17 13847562 13847644 -81425007 - L1Md_F2 LINE L1 0 6582 6502 4 690 216 97 0 0 chr17 13847710 13847741 -81424910 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 4 690 245 103 0 94 chr17 13847988 13848018 -81424633 + A-rich Low_complexity Low_complexity 1 26 0 4 690 1079 68 0 45 chr17 13848018 13848173 -81424478 + B1_Mus1 SINE Alu 1 148 0 4 690 245 103 0 94 chr17 13848173 13848206 -81424445 + A-rich Low_complexity Low_complexity 27 58 0 4 690 1068 171 109 15 chr17 13848735 13848937 -81423714 + URR1B DNA MER1_type 5 225 0 4 690 239 228 0 17 chr17 13850593 13850651 -81422000 + ID SINE ID 3 59 -165 4 690 455 266 134 24 chr17 13850732 13850859 -81421792 + ID_B1 SINE B4 76 216 -8 4 690 334 265 209 13 chr17 13853121 13853274 -81419377 + MIR SINE MIR 66 248 -14 4 690 572 141 0 39 chr17 13860847 13860862 -81411789 - B1_Mur3 SINE Alu 0 149 137 4 690 185 0 40 0 chr17 13860862 13860887 -81411764 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 4 690 572 141 0 39 chr17 13860887 13860974 -81411677 - B1_Mur3 SINE Alu -13 136 51 4 690 375 243 80 10 chr17 13861891 13862006 -81410645 + B1F2 SINE Alu 5 124 -23 4 690 242 236 156 11 chr17 13862072 13862162 -81410489 + MTEb LTR MaLR 167 269 -110 4 690 225 0 0 0 chr17 13862260 13862285 -81410366 + (CAG)n Simple_repeat Simple_repeat 1 25 0 4 690 452 117 0 13 chr17 13863358 13863436 -81409215 + (CA)n Simple_repeat Simple_repeat 2 78 0 4 690 417 266 51 66 chr17 13864060 13864257 -81408394 - MLT1A1 LTR MaLR 0 408 215 4 690 223 267 15 0 chr17 13864708 13864843 -81407808 + (CACCC)n Simple_repeat Simple_repeat 4 140 0 4 690 718 248 0 7 chr17 13865174 13865320 -81407331 + B1_Mur1 SINE Alu 1 145 -4 4 690 1220 61 0 0 chr17 13866085 13866233 -81406418 + B1_Mus1 SINE Alu 1 148 0 4 690 311 261 15 0 chr17 13866233 13866298 -81406353 + L1MEg LINE L1 1882 1947 -4137 4 690 215 31 0 30 chr17 13867461 13867494 -81405157 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 4 690 1048 43 7 42 chr17 13867500 13867644 -81405007 - B1_Mus2 SINE Alu 0 147 9 4 690 995 142 0 0 chr17 13867873 13868021 -81404630 + B1_Mus1 SINE Alu 1 148 0 4 690 844 310 190 68 chr17 13870113 13871406 -81401245 - Charlie1a DNA MER1_type -5 1450 1 4 690 364 325 61 74 chr17 13873365 13873697 -81398954 + MLT1A1 LTR MaLR 45 408 0 4 690 278 302 72 10 chr17 13873799 13873896 -81398755 + RSINE1 SINE B4 2 104 -61 4 690 651 26 0 0 chr17 13874176 13874253 -81398398 + (GA)n Simple_repeat Simple_repeat 1 77 0 4 690 297 0 0 0 chr17 13875261 13875294 -81397357 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 690 314 314 39 10 chr17 13875820 13875923 -81396728 - PB1D10 SINE Alu 0 117 12 4 690 621 333 57 0 chr17 13876270 13876534 -81396117 + MER33 DNA MER1_type 45 323 -1 4 690 24 0 0 0 chr17 13876710 13876734 -81395917 + AT_rich Low_complexity Low_complexity 1 24 0 4 690 682 178 58 15 chr17 13876775 13876912 -81395739 - B1_Mm SINE Alu 0 147 5 4 690 382 248 92 0 chr17 13879432 13879541 -81393110 - LTR33 LTR ERVL -10 505 387 4 690 349 292 22 56 chr17 13879554 13879732 -81392919 + L1MB8 LINE L1 5917 6088 -90 4 690 501 206 0 0 chr17 13879801 13879908 -81392743 + A-rich Low_complexity Low_complexity 1 107 0 4 690 294 347 52 12 chr17 13882084 13882256 -81390395 - LTR40c LTR ERVL -91 374 196 4 690 568 262 79 28 chr17 13882739 13882916 -81389735 + B3 SINE B2 1 186 -30 5 690 822 125 7 14 chr17 13883090 13883228 -81389423 - B1_Mus1 SINE Alu -6 142 6 5 690 488 243 97 97 chr17 13883228 13883284 -81389367 - B4 SINE B4 -70 220 27 5 690 334 296 27 27 chr17 13883623 13883734 -81388917 + PB1D10 SINE Alu 7 117 0 5 690 292 343 98 21 chr17 13883765 13883908 -81388743 - RSINE1 SINE B4 -6 159 6 5 690 452 306 174 53 chr17 13884146 13884525 -81388126 + L1ME3A LINE L1 3639 4063 -2083 5 690 565 220 115 77 chr17 13884595 13884881 -81387770 - RMER10A LTR ERVL -25 417 121 5 690 819 145 0 22 chr17 13884952 13885086 -81387565 - B1_Mus1 SINE Alu -13 135 5 5 690 463 315 66 32 chr17 13885146 13885556 -81387095 + L1ME3A LINE L1 4258 4681 -1465 5 690 474 338 143 10 chr17 13885793 13886086 -81386565 + L1ME3A LINE L1 4982 5313 -833 5 690 716 288 61 25 chr17 13886086 13886364 -81386287 + B4 SINE B4 1 288 -4 5 690 255 79 0 0 chr17 13886367 13886405 -81386246 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 690 402 271 126 68 chr17 13886405 13886445 -81386206 + L1ME3A LINE L1 5314 5365 -808 5 690 1207 80 73 11 chr17 13886445 13886622 -81386029 + B2_Mm2 SINE B2 2 189 -6 5 690 402 271 126 68 chr17 13886622 13886729 -81385922 + L1ME3A LINE L1 5366 5471 -702 5 690 308 319 40 80 chr17 13886986 13887187 -81385464 + L1ME3A LINE L1 5856 6048 -125 5 690 522 57 0 0 chr17 13887635 13887705 -81384946 + (CA)n Simple_repeat Simple_repeat 1 70 0 5 690 827 179 197 22 chr17 13888231 13888414 -81384237 - B3 SINE B2 0 216 2 5 690 227 311 0 0 chr17 13888456 13888517 -81384134 + PB1D10 SINE Alu 21 81 -36 5 690 465 19 0 0 chr17 13888544 13888598 -81384053 + (GGGA)n Simple_repeat Simple_repeat 4 57 0 5 690 411 321 45 8 chr17 13889491 13889623 -81383028 + ID_B1 SINE B4 88 224 0 5 690 566 226 28 116 chr17 13889681 13889896 -81382755 - B3A SINE B2 0 198 3 5 690 333 0 0 0 chr17 13889902 13889939 -81382712 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 5 690 566 213 32 8 chr17 13889944 13890067 -81382584 - B1_Mur1 SINE Alu -22 127 2 5 690 1165 75 0 0 chr17 13890240 13890387 -81382264 + B1_Mus2 SINE Alu 1 147 0 5 690 237 65 0 0 chr17 13890387 13890418 -81382233 + (A)n Simple_repeat Simple_repeat 1 31 0 5 690 315 0 0 0 chr17 13890451 13890486 -81382165 + (TTG)n Simple_repeat Simple_repeat 2 36 0 5 690 235 326 61 0 chr17 13891110 13891208 -81381443 - MLT1I LTR MaLR -245 166 63 5 690 435 181 12 6 chr17 13891608 13891714 -81380937 - B1_Mur4 SINE Alu -11 109 5 5 690 552 30 0 0 chr17 13892695 13892761 -81379890 + (TC)n Simple_repeat Simple_repeat 1 66 0 5 690 883 59 92 0 chr17 13892762 13892881 -81379770 - B1_Mm SINE Alu -17 130 1 5 690 426 252 8 87 chr17 13893120 13893246 -81379405 + B1_Mur1 SINE Alu 1 116 -33 5 690 24 53 0 0 chr17 13893372 13893410 -81379241 + AT_rich Low_complexity Low_complexity 1 38 0 5 691 447 144 288 0 chr17 13893719 13893830 -81378821 - B1_Mur2 SINE Alu -6 143 1 5 691 206 238 0 0 chr17 13893983 13894025 -81378626 + CT-rich Low_complexity Low_complexity 3 44 0 5 691 1324 99 33 0 chr17 13894480 13894662 -81377989 - B2_Mm2 SINE B2 -7 188 1 5 691 744 238 35 83 chr17 13894710 13894939 -81377712 + ID_B1 SINE B4 7 224 0 5 691 950 139 0 14 chr17 13895025 13895171 -81377480 - B1_Mur4 SINE Alu -6 144 1 5 691 269 221 31 31 chr17 13897408 13897623 -81375028 + (CG)n Simple_repeat Simple_repeat 1 215 0 5 691 35 71 0 0 chr17 13897789 13897859 -81374792 + GC_rich Low_complexity Low_complexity 1 70 0 5 691 204 163 0 0 chr17 13897895 13897938 -81374713 + (CCCG)n Simple_repeat Simple_repeat 2 44 0 5 691 21 36 0 0 chr17 13899399 13899427 -81373224 + AT_rich Low_complexity Low_complexity 1 28 0 5 691 583 148 0 57 chr17 13901327 13901449 -81371202 - B1_Mm SINE Alu 0 147 33 5 691 321 289 10 20 chr17 13901492 13901591 -81371060 - PB1D10 SINE Alu -2 115 18 5 691 272 207 288 0 chr17 13901495 13901606 -81371045 - B4A SINE B4 -68 224 82 5 691 1341 106 27 14 chr17 13901761 13901981 -81370670 - Lx2 LINE L1 0 6997 6775 5 691 1789 84 95 8 chr17 13901981 13902245 -81370406 - Lx2 LINE L1 -354 6643 6357 5 691 3804 139 106 78 chr17 13902401 13903272 -81369379 - RMER19B LTR ERVK -7 895 1 5 691 1203 55 0 0 chr17 13904828 13904973 -81367678 + B1_Mus2 SINE Alu 3 147 0 5 691 258 105 0 0 chr17 13904973 13905011 -81367640 + (A)n Simple_repeat Simple_repeat 1 38 0 5 691 915 197 23 81 chr17 13906134 13906178 -81366473 + B3 SINE B2 1 40 -176 5 691 1115 83 0 0 chr17 13906178 13906314 -81366337 + B1_Mus1 SINE Alu 1 136 -12 5 691 216 0 0 0 chr17 13906314 13906338 -81366313 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 691 915 197 23 81 chr17 13906345 13906521 -81366130 + B3 SINE B2 41 208 -8 5 691 930 299 57 51 chr17 13907041 13907555 -81365096 - L1MA6 LINE L1 -358 5942 5389 5 691 6188 123 45 55 chr17 13907560 13908306 -81364345 - Lx LINE L1 0 6654 5931 5 691 1193 54 0 0 chr17 13908306 13908453 -81364198 - B1_Mus2 SINE Alu 0 147 1 5 691 6188 130 33 28 chr17 13908453 13909114 -81363537 - Lx LINE L1 -724 5930 5248 5 691 195 69 0 0 chr17 13909114 13909143 -81363508 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 5 691 1185 50 0 0 chr17 13909144 13909285 -81363366 - B1_Mm SINE Alu -6 141 1 5 691 1346 81 37 16 chr17 13909286 13909474 -81363177 - B2_Mm2 SINE B2 -1 194 3 5 691 567 176 8 31 chr17 13909502 13909631 -81363020 - Lx7 LINE L1 -4 7692 7567 5 691 225 0 0 0 chr17 13909638 13909663 -81362988 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 691 292 375 53 13 chr17 13910747 13910974 -81361677 - MIR SINE MIR -19 243 8 5 691 536 226 39 46 chr17 13911042 13911172 -81361479 - RSINE1 SINE B4 0 165 37 5 691 229 176 0 38 chr17 13911125 13911178 -81361473 - B2_Mm2 SINE B2 -112 83 33 5 691 765 243 99 88 chr17 13911894 13911931 -81360720 - MER44B DNA MER2_type -43 507 474 5 691 276 30 0 0 chr17 13911931 13911964 -81360687 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 691 765 243 99 88 chr17 13911964 13912269 -81360382 - MER44B DNA MER2_type -77 473 161 5 691 603 301 83 36 chr17 13912295 13912571 -81360080 + B4A SINE B4 2 290 -2 5 691 267 103 0 0 chr17 13912609 13912648 -81360003 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 691 1760 120 21 61 chr17 13912880 13913208 -81359443 - ORR1A4 LTR MaLR -8 321 7 5 691 240 35 0 0 chr17 13913225 13913254 -81359397 + (CATA)n Simple_repeat Simple_repeat 2 30 0 5 691 25 31 0 0 chr17 13913318 13913350 -81359301 + AT_rich Low_complexity Low_complexity 1 32 0 5 691 288 0 0 0 chr17 13913673 13913705 -81358946 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 5 691 747 127 104 0 chr17 13914848 13914982 -81357669 + B1_Mus1 SINE Alu 1 148 0 5 691 1126 262 201 11 chr17 13915798 13915980 -81356671 + MT2A LTR ERVL 1 232 -301 5 691 195 100 0 0 chr17 13915980 13916010 -81356641 + (CTG)n Simple_repeat Simple_repeat 3 32 0 5 691 1126 262 201 11 chr17 13916010 13916275 -81356376 + MT2A LTR ERVL 233 532 -1 5 691 544 185 18 23 chr17 13916321 13916465 -81356186 - B1F1 SINE Alu 0 149 8 5 691 253 248 18 90 chr17 13916374 13916485 -81356166 - MT2B2 LTR ERVL -330 254 152 5 691 1014 92 0 0 chr17 13916587 13916718 -81355933 - B1_Mus2 SINE Alu -16 131 1 5 691 198 0 0 0 chr17 13916733 13916755 -81355896 + (TTG)n Simple_repeat Simple_repeat 3 24 0 5 691 257 264 104 0 chr17 13916995 13917101 -81355550 - PB1D10 SINE Alu 0 117 1 5 691 667 152 77 35 chr17 13917292 13917435 -81355216 - B1_Mur3 SINE Alu 0 149 1 5 691 241 231 26 26 chr17 13917541 13917692 -81354959 + CT-rich Low_complexity Low_complexity 1 151 0 5 691 655 127 18 9 chr17 13918455 13918566 -81354085 - B1_Mur2 SINE Alu -9 140 29 5 691 288 179 14 43 chr17 13918508 13918578 -81354073 - MT2B LTR ERVL -361 240 173 5 691 393 22 0 0 chr17 13918904 13918950 -81353701 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 691 402 231 43 11 chr17 13918977 13919069 -81353582 - RSINE1 SINE B4 -68 97 3 5 691 512 222 244 13 chr17 13919104 13919419 -81353232 + MTD LTR MaLR 1 389 -30 5 691 236 175 0 60 chr17 13919452 13919473 -81353178 + MTD LTR MaLR 312 330 -44 5 691 1036 62 8 0 chr17 13919473 13919603 -81353048 - B1_Mus1 SINE Alu -17 131 1 5 691 311 89 0 0 chr17 13919603 13919648 -81353003 + MTD LTR MaLR 375 419 0 5 691 1201 244 129 77 chr17 13920267 13920831 -81351820 - RLTR18B LTR ERVK -106 510 1 5 691 21 0 0 0 chr17 13920832 13920853 -81351798 + AT_rich Low_complexity Low_complexity 1 21 0 5 691 2285 149 62 17 chr17 13921295 13921698 -81350953 + MTC LTR MaLR 1 421 0 5 691 21 0 0 0 chr17 13922119 13922140 -81350511 + AT_rich Low_complexity Low_complexity 1 21 0 5 691 298 271 35 0 chr17 13922658 13922743 -81349908 + CT-rich Low_complexity Low_complexity 1 88 0 5 691 573 132 22 0 chr17 13922743 13922834 -81349817 - B1_Mus2 SINE Alu -6 141 49 5 691 296 219 57 68 chr17 13922778 13922866 -81349785 - RLTR25B LTR ERVK -519 509 423 5 691 625 178 87 65 chr17 13922900 13923038 -81349613 + Lx8 LINE L1 7007 7147 -326 5 691 371 243 274 27 chr17 13923181 13923426 -81349225 - RMER4B LTR ERVK -11 574 212 5 691 1082 117 71 0 chr17 13923535 13923731 -81348920 - RMER4B LTR ERVK -375 210 1 5 691 3445 30 2 2 chr17 13924176 13924572 -81348079 - MTA_Mm LTR MaLR 0 396 1 5 691 8938 48 3 10 chr17 13924572 13925289 -81347362 - MTA_Mm-int LTR MaLR 0 1098 391 5 691 1371 95 5 5 chr17 13925289 13925480 -81347171 - B2_Mm1a SINE B2 -1 192 2 5 691 8938 48 3 10 chr17 13925480 13925868 -81346783 - MTA_Mm-int LTR MaLR -708 390 1 5 691 3443 30 2 2 chr17 13925868 13926264 -81346387 - MTA_Mm LTR MaLR 0 396 1 5 691 739 144 69 41 chr17 13926369 13926514 -81346137 + B1_Mur3 SINE Alu 1 149 0 5 691 440 165 0 0 chr17 13926755 13926834 -81345817 + RMER4B LTR ERVK 68 146 -439 5 691 2396 101 3 0 chr17 13926950 13927276 -81345375 - ORR1A2 LTR MaLR 0 327 1 5 691 308 289 136 10 chr17 13927471 13927677 -81344974 + RLTR42-int LTR ERVK 1157 1388 -4134 5 691 234 0 0 0 chr17 13927955 13927981 -81344670 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 5 691 7709 76 17 0 chr17 13927981 13929535 -81343116 - L1_Mus1 LINE L1 -2 6565 4984 5 691 544 237 57 36 chr17 13930176 13930316 -81342335 + RSINE1 SINE B4 23 165 0 6 691 291 298 213 24 chr17 13932201 13932328 -81340323 - RSINE1 SINE B4 0 165 15 6 691 265 235 12 12 chr17 13932398 13932484 -81340167 + CT-rich Low_complexity Low_complexity 3 88 0 6 691 524 146 0 141 chr17 13932508 13932636 -81340015 - B1_Mur2 SINE Alu 0 149 40 6 691 251 98 73 0 chr17 13932686 13932727 -81339924 - PB1D9 SINE Alu -68 52 9 6 691 525 241 47 54 chr17 13933362 13933511 -81339140 - RCHARR1 DNA MER1_type -749 225 78 6 691 522 271 20 27 chr17 13933514 13933662 -81338989 + B1F2 SINE Alu 3 149 0 6 691 264 234 49 49 chr17 13933665 13933746 -81338905 - RCHARR1 DNA MER1_type -893 81 1 6 691 234 0 0 0 chr17 13934326 13934352 -81338299 + (TTTTTG)n Simple_repeat Simple_repeat 5 30 0 6 691 1163 62 0 7 chr17 13934352 13934498 -81338153 - B1_Mm SINE Alu 0 147 3 6 691 944 143 148 0 chr17 13934646 13934802 -81337849 - URR1B DNA MER1_type 0 225 58 6 691 2164 152 50 3 chr17 13934802 13935178 -81337473 + ORR1B1 LTR MaLR 1 394 0 6 691 944 143 148 0 chr17 13935178 13935217 -81337434 - URR1B DNA MER1_type -168 57 2 6 691 2639 38 3 3 chr17 13935502 13935823 -81336828 + L1Md_F3 LINE L1 6250 6570 -14 6 691 396 71 0 0 chr17 13935948 13936004 -81336647 + (TATG)n Simple_repeat Simple_repeat 4 59 0 6 691 749 138 0 39 chr17 13936031 13936159 -81336492 - B2_Mm2 SINE B2 -71 124 2 6 691 25 0 0 68 chr17 13936343 13936387 -81336264 + AT_rich Low_complexity Low_complexity 1 41 0 6 691 1486 128 109 14 chr17 13936596 13936890 -81335761 - ORR1B2 LTR MaLR -45 322 1 6 691 335 310 62 49 chr17 13937054 13937278 -81335373 - L1MC LINE L1 -2375 5507 5281 6 691 369 250 29 9 chr17 13937567 13937672 -81334979 - MTE2b LTR MaLR -272 107 1 6 691 405 238 90 30 chr17 13937925 13938059 -81334592 - B1F SINE Alu -6 143 2 6 691 733 160 278 0 chr17 13938110 13938279 -81334372 - B3 SINE B2 0 216 1 6 691 27 29 0 0 chr17 13938566 13938600 -81334051 + AT_rich Low_complexity Low_complexity 1 34 0 6 691 1160 41 0 64 chr17 13938600 13938757 -81333894 - B1_Mm SINE Alu 0 147 1 6 691 423 0 0 0 chr17 13939389 13939436 -81333215 + (TTA)n Simple_repeat Simple_repeat 2 48 0 6 691 212 303 79 0 chr17 13940265 13940354 -81332297 + RSINE1 SINE B4 45 140 -25 6 691 459 0 0 0 chr17 13940355 13940406 -81332245 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 691 21 57 0 0 chr17 13940731 13940766 -81331885 + AT_rich Low_complexity Low_complexity 1 35 0 6 691 25 83 0 0 chr17 13941306 13941366 -81331285 + AT_rich Low_complexity Low_complexity 1 60 0 6 691 393 188 0 0 chr17 13941534 13941614 -81331037 + (TA)n Simple_repeat Simple_repeat 2 81 0 6 691 2172 96 0 13 chr17 13941681 13941988 -81330663 - L1Md_F2 LINE L1 -12 6570 6268 6 691 1737 204 135 25 chr17 13942005 13942487 -81330164 - RMER15 LTR ERVL -12 563 29 6 691 304 235 0 0 chr17 13943205 13943273 -81329378 - ID4 SINE ID -13 70 3 6 691 302 229 154 61 chr17 13943279 13943493 -81329158 - MER119 DNA MER1_type -42 541 308 6 691 345 238 89 0 chr17 13944824 13944925 -81327726 - MTEb LTR MaLR -8 371 262 6 691 217 231 0 0 chr17 13946010 13946049 -81326602 + polypurine Low_complexity Low_complexity 2 40 0 6 691 21 0 0 0 chr17 13946773 13946794 -81325857 + AT_rich Low_complexity Low_complexity 1 21 0 6 691 663 48 0 0 chr17 13948151 13948234 -81324417 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 6 691 1482 193 38 7 chr17 13948260 13948547 -81324104 + MTD LTR MaLR 1 296 -123 6 691 591 236 89 0 chr17 13949086 13949209 -81323442 + B1_Mur1 SINE Alu 4 137 -12 6 691 1730 148 151 59 chr17 13950295 13950653 -81321998 + ORR1B1 LTR MaLR 1 391 -3 6 691 740 272 58 97 chr17 13950765 13951151 -81321500 - ORR1E LTR MaLR -8 362 1 6 691 563 152 50 0 chr17 13951339 13951438 -81321213 + PB1D9 SINE Alu 14 117 -3 6 691 510 230 35 26 chr17 13952267 13952383 -81320268 + PB1D10 SINE Alu 1 117 0 6 691 1249 48 14 0 chr17 13952418 13952563 -81320088 - B1_Mm SINE Alu 0 147 1 6 691 636 253 7 46 chr17 13952691 13952844 -81319807 + B1F SINE Alu 2 148 -1 6 691 696 211 110 12 chr17 13953091 13953254 -81319397 - B3A SINE B2 -17 181 3 6 691 765 184 12 4 chr17 13954043 13954285 -81318366 + CT-rich Low_complexity Low_complexity 1 243 0 6 691 798 125 0 20 chr17 13954285 13954432 -81318219 + (TCCC)n Simple_repeat Simple_repeat 1 144 0 6 691 576 113 144 0 chr17 13954436 13954533 -81318118 - B1_Mur2 SINE Alu -14 135 25 6 691 29 60 0 0 chr17 13955435 13955485 -81317166 + AT_rich Low_complexity Low_complexity 1 50 0 6 691 21 36 0 0 chr17 13955607 13955635 -81317016 + AT_rich Low_complexity Low_complexity 1 28 0 6 691 392 336 101 68 chr17 13955647 13955954 -81316697 - MLT2B3 LTR ERVL -113 441 125 6 691 1284 48 7 0 chr17 13955987 13956133 -81316518 + B1_Mm SINE Alu 1 147 0 6 691 624 214 8 8 chr17 13956488 13956615 -81316036 - MTEa LTR MaLR -57 322 196 6 691 487 232 106 31 chr17 13956693 13956853 -81315798 - B4A SINE B4 -31 261 90 6 691 1323 254 59 48 chr17 13956882 13957303 -81315348 - Lx8 LINE L1 0 7473 7048 6 691 294 29 0 0 chr17 13959082 13959117 -81313534 + (ATTG)n Simple_repeat Simple_repeat 1 35 0 6 691 414 0 0 0 chr17 13959456 13959502 -81313149 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 691 182 118 29 0 chr17 13959502 13959536 -81313115 + (GA)n Simple_repeat Simple_repeat 2 36 0 6 691 1084 67 82 0 chr17 13965577 13965712 -81306939 + B1_Mus2 SINE Alu 1 146 -1 6 691 756 123 28 39 chr17 13966358 13966536 -81306115 + C-rich Low_complexity Low_complexity 4 179 0 6 691 459 0 0 0 chr17 13966538 13966589 -81306062 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 691 342 250 106 0 chr17 13967247 13967351 -81305300 - RSINE1 SINE B4 -6 159 45 6 691 767 260 88 10 chr17 13967402 13967596 -81305055 + B3 SINE B2 1 209 -7 6 691 361 199 51 13 chr17 13968122 13968200 -81304451 - B1_Mur4 SINE Alu -23 127 46 6 691 204 40 0 0 chr17 13968255 13968280 -81304371 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 6 691 185 0 40 0 chr17 13968929 13968954 -81303697 + (TTA)n Simple_repeat Simple_repeat 2 27 0 6 691 760 253 121 0 chr17 13968959 13969133 -81303518 - B3 SINE B2 -21 195 1 6 691 363 355 64 55 chr17 13970493 13970836 -81301815 + L2 LINE L2 2187 2532 -887 6 691 637 225 21 14 chr17 13973361 13973505 -81299146 - B1_Mur2 SINE Alu 0 149 5 6 691 476 221 109 73 chr17 13974071 13974208 -81298443 + B1_Mur1 SINE Alu 3 144 -5 6 691 341 145 0 75 chr17 13974449 13974516 -81298135 - HAL1-3A_ME LINE L1 -831 2027 1966 6 691 39002 32 1 1 chr17 13975031 13982090 -81290561 - L1Md_T LINE L1 0 6585 1 6 691 207 69 0 0 chr17 13982712 13982741 -81289910 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 691 347 211 28 0 chr17 13982808 13982879 -81289772 + B3A SINE B2 1 73 -125 6 691 999 226 37 33 chr17 13986725 13986940 -81285711 - B3 SINE B2 0 216 1 6 691 290 116 0 0 chr17 13986975 13987018 -81285633 - tRNA-Met-i tRNA tRNA -32 43 1 6 691 588 228 162 37 chr17 13987045 13987236 -81285415 - B3 SINE B2 0 216 2 6 691 465 303 69 16 chr17 13987290 13987478 -81285173 - B3A SINE B2 0 198 1 6 691 509 316 191 0 chr17 13988198 13988464 -81284187 - MLT1C LTR MaLR -15 452 149 6 691 222 171 0 0 chr17 13989950 13989991 -81282660 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 691 2841 118 88 96 chr17 13990801 13991324 -81281327 + MURVY-LTR LTR ERV1 1 519 0 6 691 327 208 12 91 chr17 13994860 13994957 -81277694 + PB1D10 SINE Alu 30 127 0 6 691 632 102 10 0 chr17 13994963 13995061 -81277590 + (TTTTC)n Simple_repeat Simple_repeat 3 101 0 6 691 4698 92 88 24 chr17 13995062 13995741 -81276910 - Lx LINE L1 0 6654 5932 6 691 3089 61 8 2 chr17 13995820 13996213 -81276438 - Lx LINE L1 -597 6057 5663 6 691 397 248 39 10 chr17 13996670 13996772 -81275879 + PB1D10 SINE Alu 9 113 -4 6 691 301 254 38 106 chr17 13996772 13996802 -81275849 + ID_B1 SINE B4 90 212 -12 6 691 1415 77 32 16 chr17 13998467 13998653 -81273998 + B2_Mm2 SINE B2 3 191 -4 6 691 435 262 0 36 chr17 14000596 14000707 -81271944 + PB1D10 SINE Alu 6 112 -5 1 691 1111 257 72 6 chr17 14001000 14001351 -81271300 - MTD LTR MaLR 0 374 1 2 691 1113 228 45 59 chr17 14002784 14003138 -81269513 + MTEb LTR MaLR 3 351 -28 3 691 22 0 0 0 chr17 14005164 14005186 -81267465 + AT_rich Low_complexity Low_complexity 1 22 0 4 691 472 33 0 0 chr17 14005436 14005496 -81267155 + MTA_Mm LTR MaLR 1 60 -336 5 691 3517 51 0 11 chr17 14005489 14006130 -81266521 + MTA_Mm-int LTR MaLR 330 1098 0 6 691 3452 33 3 0 chr17 14006130 14006522 -81266129 + MTA_Mm LTR MaLR 1 393 -3 6 691 375 262 85 90 chr17 14006704 14006863 -81265788 + B3A SINE B2 4 163 -35 7 691 270 0 0 0 chr17 14006863 14006893 -81265758 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 691 375 262 85 90 chr17 14006893 14006922 -81265729 + B3A SINE B2 164 191 -7 7 691 15060 133 28 42 chr17 14007220 14009594 -81263057 - Lx LINE L1 0 6654 4254 9 691 544 111 0 0 chr17 14009594 14009675 -81262976 + RLTR10B2 LTR ERVK 1 81 -284 1 691 15060 133 28 42 chr17 14009675 14010073 -81262578 - Lx LINE L1 0 4253 3850 9 691 261 0 0 0 chr17 14010073 14010102 -81262549 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 691 15060 136 28 49 chr17 14010102 14010708 -81261943 - Lx LINE L1 -2028 3849 3249 9 691 423 263 152 11 chr17 14012460 14012637 -81260014 - MER33 DNA MER1_type -118 206 5 1 691 642 261 112 0 chr17 14012847 14012877 -81259774 - B3 SINE B2 -7 209 180 1 691 342 0 0 0 chr17 14012877 14012915 -81259736 + (TATG)n Simple_repeat Simple_repeat 2 39 0 1 691 642 261 112 0 chr17 14012915 14013072 -81259579 - B3 SINE B2 -37 179 2 1 691 505 245 18 43 chr17 14014315 14014497 -81258154 + B3A SINE B2 1 183 -12 1 691 510 241 25 1 chr17 14015228 14015350 -81257301 - B1_Mur1 SINE Alu -16 133 7 1 691 438 127 0 0 chr17 14015357 14015428 -81257223 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 691 2301 288 69 82 chr17 14015432 14016584 -81256067 - Lx8 LINE L1 -148 7325 6190 1 691 241 235 29 29 chr17 14017215 14017351 -81255300 + (TA)n Simple_repeat Simple_repeat 1 136 0 1 691 1158 68 0 14 chr17 14018390 14018538 -81254113 - B1_Mus2 SINE Alu 0 147 2 2 691 512 230 79 29 chr17 14019618 14019757 -81252894 + B3 SINE B2 65 210 -6 2 691 472 306 8 0 chr17 14020436 14020560 -81252091 + B1_Mur1 SINE Alu 1 125 -24 2 691 180 234 0 0 chr17 14021195 14021242 -81251409 + GA-rich Low_complexity Low_complexity 1 47 0 2 691 27 73 0 0 chr17 14021767 14021822 -81250829 + AT_rich Low_complexity Low_complexity 1 55 0 2 691 1082 107 89 0 chr17 14022071 14022240 -81250411 + L1Md_F2 LINE L1 6387 6570 -12 2 691 22 56 0 0 chr17 14022598 14022634 -81250017 + AT_rich Low_complexity Low_complexity 1 36 0 2 692 35 54 0 0 chr17 14027639 14027695 -81244956 + AT_rich Low_complexity Low_complexity 1 56 0 2 692 216 0 0 0 chr17 14028522 14028546 -81244105 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 692 21 36 0 0 chr17 14029162 14029190 -81243461 + AT_rich Low_complexity Low_complexity 1 28 0 2 692 810 200 139 11 chr17 14031610 14031797 -81240854 - B3 SINE B2 -4 212 2 3 692 23 0 0 0 chr17 14031849 14031872 -81240779 + AT_rich Low_complexity Low_complexity 1 23 0 3 692 182 65 65 0 chr17 14032993 14033024 -81239627 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 3 692 211 140 20 20 chr17 14037996 14038047 -81234604 + (TA)n Simple_repeat Simple_repeat 1 51 0 3 692 217 276 0 0 chr17 14038613 14038671 -81233980 - B3A SINE B2 -126 72 15 3 692 23 54 0 0 chr17 14039245 14039282 -81233369 + AT_rich Low_complexity Low_complexity 1 37 0 3 692 286 319 11 0 chr17 14039823 14039917 -81232734 - B1F SINE Alu -43 106 12 3 692 226 272 84 24 chr17 14040325 14040408 -81232243 - B4A SINE B4 -4 288 201 3 692 6478 128 56 13 chr17 14044739 14046580 -81226071 - Lx LINE L1 -20 6634 4722 3 692 364 292 47 64 chr17 14046580 14046752 -81225899 - MLT1B LTR MaLR -192 198 30 3 692 312 300 53 49 chr17 14046954 14047238 -81225413 + L1M4 LINE L1 4203 4487 -1659 4 692 421 272 163 8 chr17 14048638 14048926 -81223725 - MLT1A1 LTR MaLR -13 395 20 4 692 1921 93 0 0 chr17 14049771 14050030 -81222621 + L1_Mus2 LINE L1 6306 6564 -2 4 692 640 234 137 11 chr17 14050763 14050953 -81221698 - B3 SINE B2 -2 214 1 4 692 2946 75 28 3 chr17 14052748 14053138 -81219513 - MTB LTR MaLR 0 400 1 4 692 243 0 0 0 chr17 14053162 14053189 -81219462 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 692 1166 62 7 0 chr17 14053202 14053348 -81219303 - B1_Mus1 SINE Alu 0 148 2 4 692 446 96 14 0 chr17 14053495 14053568 -81219083 + (TG)n Simple_repeat Simple_repeat 2 75 0 4 692 405 0 0 0 chr17 14054028 14054073 -81218578 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 692 1250 48 0 0 chr17 14054276 14054423 -81218228 + B1_Mus2 SINE Alu 1 147 0 4 692 266 73 24 0 chr17 14054423 14054464 -81218187 + (GAGAA)n Simple_repeat Simple_repeat 3 44 0 5 692 238 169 31 0 chr17 14055884 14055949 -81216702 + CT-rich Low_complexity Low_complexity 4 70 0 5 692 391 208 247 10 chr17 14055969 14056066 -81216585 + PB1D9 SINE Alu 1 120 0 5 692 2010 118 92 50 chr17 14057379 14057761 -81214890 - RMER10B LTR ERVL 0 398 1 5 692 423 316 137 27 chr17 14058862 14058886 -81213765 - B4A SINE B4 0 292 270 5 692 324 0 0 0 chr17 14058886 14058922 -81213729 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 692 423 316 137 27 chr17 14058922 14059160 -81213491 - B4A SINE B4 -23 269 2 5 692 282 156 0 0 chr17 14059546 14059610 -81213041 + CT-rich Low_complexity Low_complexity 1 64 0 5 692 387 0 0 0 chr17 14059623 14059666 -81212985 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 692 268 300 13 91 chr17 14060244 14060321 -81212330 + B1F SINE Alu 30 100 -17 5 692 279 0 0 0 chr17 14061965 14061996 -81210655 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 692 663 312 118 28 chr17 14062021 14062488 -81210163 - Lx8 LINE L1 -52 7421 6899 6 692 1044 303 119 43 chr17 14062477 14063292 -81209359 + L1_Mur3 LINE L1 1766 2642 -3238 6 692 673 281 14 0 chr17 14064645 14064791 -81207860 + RSINE1 SINE B4 3 150 -15 6 692 303 291 28 46 chr17 14066940 14067048 -81205603 - ORR1E LTR MaLR -166 193 88 6 692 212 200 14 0 chr17 14067435 14067505 -81205146 + (TG)n Simple_repeat Simple_repeat 2 72 0 6 692 3070 59 51 0 chr17 14067597 14067988 -81204663 - RLTR10A LTR ERVK 0 411 1 6 692 7213 93 1 23 chr17 14068913 14070263 -81202388 - L1_Mus2 LINE L1 0 6566 5247 6 692 324 275 46 0 chr17 14070696 14070805 -81201846 + L1MA9 LINE L1 6193 6306 -6 6 692 180 0 0 0 chr17 14070880 14070900 -81201751 + (CA)n Simple_repeat Simple_repeat 2 21 0 6 692 445 296 22 22 chr17 14071653 14071791 -81200860 - B1F1 SINE Alu -10 139 2 6 692 966 130 0 0 chr17 14071795 14071949 -81200702 + (TTTC)n Simple_repeat Simple_repeat 2 155 0 7 692 189 0 0 0 chr17 14073851 14073872 -81198779 + (TG)n Simple_repeat Simple_repeat 1 21 0 7 692 260 320 26 0 chr17 14074291 14074369 -81198282 - ID4 SINE ID -1 82 3 7 692 1196 68 0 0 chr17 14074593 14074740 -81197911 + B1_Mm SINE Alu 1 147 0 7 692 181 340 0 0 chr17 14076105 14076152 -81196499 - L3b LINE CR1 -247 235 189 7 692 251 307 11 0 chr17 14076685 14076773 -81195878 + (TG)n Simple_repeat Simple_repeat 2 90 0 7 692 234 0 0 0 chr17 14078286 14078312 -81194339 + (TG)n Simple_repeat Simple_repeat 2 27 0 7 692 409 335 0 27 chr17 14078326 14078510 -81194141 + (TG)n Simple_repeat Simple_repeat 2 180 0 7 692 180 231 0 0 chr17 14078535 14078587 -81194064 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 692 387 305 23 6 chr17 14078605 14078780 -81193871 + (TG)n Simple_repeat Simple_repeat 1 178 0 7 692 344 293 105 61 chr17 14080949 14081196 -81191455 + L1_Mur2 LINE L1 507 764 -6322 7 692 1034 191 27 5 chr17 14081309 14081530 -81191121 + L1_Mur2 LINE L1 2189 2414 -3463 7 692 316 298 33 50 chr17 14082920 14083040 -81189611 - B4A SINE B4 -151 141 24 7 692 395 306 6 9 chr17 14083513 14083869 -81188782 + (TG)n Simple_repeat Simple_repeat 1 354 0 7 692 545 240 23 15 chr17 14083956 14084087 -81188564 - B4 SINE B4 -17 275 144 8 692 307 324 16 91 chr17 14085158 14085345 -81187306 - L1M2 LINE L1 -2848 3295 3123 8 692 462 36 0 0 chr17 14087746 14087802 -81184849 + (CAG)n Simple_repeat Simple_repeat 1 56 0 8 692 228 288 0 121 chr17 14089690 14089781 -81182870 - LTR48 LTR ERV1 -656 131 52 8 692 846 119 20 7 chr17 14091157 14091309 -81181342 + (TTTTC)n Simple_repeat Simple_repeat 2 155 0 8 692 1048 88 7 0 chr17 14091321 14091458 -81181193 - B1_Mm SINE Alu -7 140 3 8 692 452 307 12 12 chr17 14091536 14091704 -81180947 + (TG)n Simple_repeat Simple_repeat 2 169 0 8 692 210 207 0 0 chr17 14091704 14091762 -81180889 + GA-rich Low_complexity Low_complexity 1 58 0 8 692 24 0 0 0 chr17 14094863 14094887 -81177764 + AT_rich Low_complexity Low_complexity 1 24 0 8 692 7423 90 11 16 chr17 14095394 14096568 -81176083 + ORR1A1-int LTR MaLR 144 1792 0 8 692 2237 72 86 21 chr17 14096568 14096893 -81175758 + ORR1A1 LTR MaLR 1 346 0 8 692 1861 149 14 75 chr17 14097150 14097408 -81175243 + ORR1A2 LTR MaLR 2 239 -88 9 692 3375 50 0 0 chr17 14097408 14097804 -81174847 - MTA_Mm LTR MaLR 0 396 1 9 692 1861 149 14 75 chr17 14097804 14097892 -81174759 + ORR1A2 LTR MaLR 240 327 0 9 692 472 207 29 136 chr17 14097930 14098070 -81174581 - ORR1D2-int LTR MaLR -1239 131 7 9 692 953 292 79 18 chr17 14098070 14098411 -81174240 - ORR1D2 LTR MaLR 0 370 9 9 692 573 55 0 0 chr17 14098671 14098744 -81173907 + (TG)n Simple_repeat Simple_repeat 1 73 0 9 692 387 261 108 8 chr17 14098760 14098880 -81173771 - B1_Mur2 SINE Alu 0 149 18 9 692 238 197 43 0 chr17 14099767 14099884 -81172767 + (TG)n Simple_repeat Simple_repeat 1 122 0 9 692 314 276 12 12 chr17 14099915 14100172 -81172479 + (TG)n Simple_repeat Simple_repeat 1 257 0 9 692 364 384 9 81 chr17 14100173 14100394 -81172257 - B4A SINE B4 0 292 88 9 692 189 0 0 0 chr17 14101912 14101933 -81170718 + (CAAAAA)n Simple_repeat Simple_repeat 1 21 0 9 692 336 227 145 11 chr17 14103673 14103796 -81168855 + MLT1A1 LTR MaLR 214 392 -16 9 692 1093 89 0 7 chr17 14104006 14104153 -81168498 + B1_Mm SINE Alu 2 147 0 9 692 370 330 114 54 chr17 14105230 14105268 -81167383 - L1M4 LINE L1 -1698 4448 4403 1 692 5927 50 6 4 chr17 14105268 14105997 -81166654 + L1Md_F3 LINE L1 5851 6580 -4 1 692 370 330 114 54 chr17 14105997 14106291 -81166360 - L1M4 LINE L1 -1744 4402 4096 1 692 551 270 89 47 chr17 14106417 14106631 -81166020 + MLT1B LTR MaLR 29 251 -139 1 692 2454 103 29 3 chr17 14108654 14109004 -81163647 - RLTR10D LTR ERVK 0 359 1 1 692 27 0 0 0 chr17 14110330 14110357 -81162294 + AT_rich Low_complexity Low_complexity 1 27 0 1 692 1145 82 7 0 chr17 14110357 14110503 -81162148 - B1_Mus2 SINE Alu 0 147 1 1 692 2807 47 5 16 chr17 14110974 14111341 -81161310 + L1Md_F2 LINE L1 6219 6581 -1 1 692 777 43 15 5 chr17 14111921 14112039 -81160612 + B1_Mm SINE Alu 30 149 0 1 692 279 0 0 0 chr17 14112042 14112073 -81160578 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 692 6833 92 11 1 chr17 14113032 14113965 -81158686 - L1_Mus3 LINE L1 0 6638 5697 1 692 9920 112 13 9 chr17 14113982 14116216 -81156435 - L1_Mus2 LINE L1 0 6566 4332 1 692 691 239 131 0 chr17 14120116 14120292 -81152359 + B3 SINE B2 14 212 -4 1 692 3044 79 13 0 chr17 14120716 14121108 -81151543 + MTB LTR MaLR 1 397 -3 1 692 204 40 0 0 chr17 14121885 14121910 -81150741 + (CAA)n Simple_repeat Simple_repeat 2 26 0 1 692 21 0 0 0 chr17 14122598 14122619 -81150032 + AT_rich Low_complexity Low_complexity 1 21 0 1 692 21 0 0 0 chr17 14123390 14123411 -81149240 + AT_rich Low_complexity Low_complexity 1 21 0 1 692 198 0 0 0 chr17 14123650 14123672 -81148979 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 692 818 166 23 65 chr17 14123708 14123916 -81148735 - IAPLTR2b LTR ERVK 0 326 127 1 692 216 197 41 33 chr17 14124349 14124470 -81148181 + (CA)n Simple_repeat Simple_repeat 1 122 0 1 692 222 329 26 0 chr17 14125546 14125622 -81147029 - ID4 SINE ID -3 80 3 1 692 456 86 0 0 chr17 14127751 14127821 -81144830 + (TG)n Simple_repeat Simple_repeat 2 71 0 1 692 249 219 0 0 chr17 14131813 14131886 -81140765 + CT-rich Low_complexity Low_complexity 1 73 0 1 692 186 240 0 0 chr17 14132010 14132060 -81140591 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 692 977 117 7 0 chr17 14132148 14132285 -81140366 + B1_Mm SINE Alu 2 139 -8 1 692 218 91 30 0 chr17 14132300 14132333 -81140318 + (GAAA)n Simple_repeat Simple_repeat 2 35 0 1 692 899 107 0 43 chr17 14132339 14132524 -81140127 + GA-rich Low_complexity Low_complexity 2 178 0 1 692 1461 48 0 0 chr17 14135926 14136409 -81136242 + (CTG)n Simple_repeat Simple_repeat 1 483 0 1 692 21 57 0 0 chr17 14138795 14138830 -81133821 + AT_rich Low_complexity Low_complexity 1 35 0 1 692 455 265 22 15 chr17 14140061 14140195 -81132456 + B4 SINE B4 141 275 -17 1 692 388 306 0 6 chr17 14140350 14140524 -81132127 + (CA)n Simple_repeat Simple_repeat 2 174 0 1 692 229 250 0 14 chr17 14140541 14140610 -81132041 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 692 274 294 35 52 chr17 14141087 14141202 -81131449 + B4A SINE B4 29 141 -151 1 692 1135 192 9 4 chr17 14142609 14142834 -81129817 - L1_Mur2 LINE L1 -3463 2414 2189 1 692 351 290 103 59 chr17 14142945 14143198 -81129453 - L1_Mur2 LINE L1 -6322 764 501 1 692 9564 56 2 1 chr17 14143328 14145225 -81127426 - L1Md_F2 LINE L1 -12 6570 4671 1 692 262 163 37 37 chr17 14145345 14145453 -81127198 + (TG)n Simple_repeat Simple_repeat 1 108 0 1 692 1630 152 16 42 chr17 14147359 14147669 -81124982 + IAPLTR2b LTR ERVK 1 302 -25 1 692 309 146 0 0 chr17 14147719 14147774 -81124877 + HAL1-3A_ME LINE L1 1964 2018 -840 1 692 22 0 0 0 chr17 14148013 14148035 -81124616 + AT_rich Low_complexity Low_complexity 1 22 0 1 692 21 0 0 0 chr17 14148806 14148827 -81123824 + AT_rich Low_complexity Low_complexity 1 21 0 1 692 2095 76 3 0 chr17 14150268 14150559 -81122092 - MTB LTR MaLR 0 400 109 1 692 2162 30 114 0 chr17 14150559 14150821 -81121830 + RLTR10B LTR ERVK 1 292 0 1 86 38743 16 3 7 chr17 14150850 14156313 -81116338 + L1Md_A LINE L1 151 5586 -297 1 693 8606 32 1 0 chr17 14156313 14157307 -81115344 + L1Md_A LINE L1 5587 6581 -1 1 693 622 12 12 0 chr17 14157307 14157392 -81115259 + MTA_Mm-int LTR MaLR 1012 1097 -1 1 693 2503 56 6 0 chr17 14157393 14157733 -81114918 + MTA_Mm LTR MaLR 1 342 -54 1 693 318 50 0 0 chr17 14157734 14157774 -81114877 + (A)n Simple_repeat Simple_repeat 1 40 0 1 693 1956 49 32 0 chr17 14157774 14158020 -81114631 + MMERVK10C-int LTR ERVK 23 276 -7305 1 693 732 56 213 0 chr17 14158006 14158114 -81114537 + MMERVK10C-int LTR ERVK 5436 5566 -2015 1 693 842 82 7 21 chr17 14158114 14158315 -81114336 + MMERVK10C-int LTR ERVK 7442 7579 -2 1 693 2129 38 114 0 chr17 14158317 14158579 -81114072 + RLTR10B LTR ERVK 1 292 0 1 693 673 101 18 9 chr17 14158579 14158689 -81113962 - MTB LTR MaLR -285 111 1 1 693 614 261 131 0 chr17 14159114 14159290 -81113361 - B3 SINE B2 -4 212 14 1 693 10029 108 15 9 chr17 14163180 14165411 -81107240 + L1_Mus2 LINE L1 4332 6566 0 1 693 6909 89 10 1 chr17 14165431 14166364 -81106287 + L1_Mus3 LINE L1 5697 6637 -1 1 693 207 0 0 0 chr17 14167323 14167346 -81105305 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 693 777 34 16 5 chr17 14167350 14167467 -81105184 - B1_Mm SINE Alu -1 148 30 1 693 2884 44 6 6 chr17 14168048 14168411 -81104240 - L1Md_F2 LINE L1 -1 6581 6219 1 693 1100 89 7 0 chr17 14168883 14169029 -81103622 + B1_Mus2 SINE Alu 1 147 0 1 693 27 0 0 0 chr17 14169029 14169056 -81103595 + AT_rich Low_complexity Low_complexity 1 27 0 1 693 8824 19 0 0 chr17 14170292 14171289 -81101362 - L1Md_T LINE L1 -230 5653 4657 1 693 8413 8 0 0 chr17 14171289 14172207 -81100444 + L1Md_T LINE L1 5665 6582 0 1 693 270 0 0 0 chr17 14172211 14172241 -81100410 + (A)n Simple_repeat Simple_repeat 1 30 0 1 693 2394 109 29 3 chr17 14172340 14172690 -81099961 + RLTR10D LTR ERVK 1 359 0 1 693 435 274 89 47 chr17 14174713 14174927 -81097724 - MLT1B LTR MaLR -139 251 29 1 693 6062 41 6 3 chr17 14175335 14176066 -81096585 - L1Md_F3 LINE L1 -1 6583 5851 1 693 1119 82 0 7 chr17 14177181 14177328 -81095323 - B1_Mm SINE Alu 0 147 2 1 693 292 227 145 11 chr17 14177538 14177661 -81094990 - MLT1A1 LTR MaLR -16 392 214 1 693 243 0 0 0 chr17 14179403 14179430 -81093221 + (TTTTTG)n Simple_repeat Simple_repeat 1 27 0 1 693 21 36 0 0 chr17 14180155 14180183 -81092468 + AT_rich Low_complexity Low_complexity 1 28 0 1 693 304 384 9 81 chr17 14180946 14181167 -81091484 + B4A SINE B4 88 292 0 1 693 335 276 12 12 chr17 14181168 14181425 -81091226 + (CA)n Simple_repeat Simple_repeat 1 257 0 1 693 360 233 43 0 chr17 14181459 14181575 -81091076 + (CA)n Simple_repeat Simple_repeat 2 122 0 1 693 525 286 27 11 chr17 14182464 14182648 -81090003 - B3 SINE B2 -2 214 28 1 693 359 227 106 32 chr17 14183017 14183140 -81089511 + B1_Mur2 SINE Alu 18 149 0 1 693 854 304 76 15 chr17 14183853 14184194 -81088457 + ORR1D2 LTR MaLR 9 370 0 1 693 404 204 30 144 chr17 14184202 14184334 -81088317 + ORR1D2-int LTR MaLR 15 131 -1239 1 693 1852 151 15 59 chr17 14184376 14184713 -81087938 - ORR1A2 LTR MaLR -4 323 2 1 693 2234 72 86 21 chr17 14184970 14185295 -81087356 - ORR1A1 LTR MaLR 0 346 1 1 693 6914 85 11 8 chr17 14185295 14186469 -81086182 - ORR1A1-int LTR MaLR 0 1792 144 1 693 24 0 0 0 chr17 14186976 14187000 -81085651 + AT_rich Low_complexity Low_complexity 1 24 0 1 693 210 207 0 0 chr17 14190101 14190159 -81082492 + CT-rich Low_complexity Low_complexity 1 58 0 1 693 452 307 12 12 chr17 14190159 14190327 -81082324 + (CA)n Simple_repeat Simple_repeat 2 169 0 1 693 1041 88 7 0 chr17 14190405 14190542 -81082109 + B1_Mm SINE Alu 3 140 -7 1 693 956 105 41 0 chr17 14190553 14190724 -81081927 + (GAAAA)n Simple_repeat Simple_repeat 3 180 0 1 693 813 40 0 0 chr17 14194072 14194173 -81078478 + (CTG)n Simple_repeat Simple_repeat 1 101 0 1 693 21 57 0 0 chr17 14196561 14196596 -81076055 + AT_rich Low_complexity Low_complexity 1 35 0 1 693 489 271 30 15 chr17 14197772 14197961 -81074690 + B4 SINE B4 81 275 -17 1 693 268 238 12 12 chr17 14198048 14198133 -81074518 + (CA)n Simple_repeat Simple_repeat 1 85 0 1 693 363 312 0 6 chr17 14198158 14198332 -81074319 + (CA)n Simple_repeat Simple_repeat 2 174 0 1 693 229 250 0 14 chr17 14198349 14198418 -81074233 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 693 287 300 26 52 chr17 14198895 14199011 -81073640 + B4A SINE B4 29 141 -151 1 693 1118 196 9 4 chr17 14200416 14200641 -81072010 - L1_Mur2 LINE L1 -3463 2414 2189 1 693 341 289 105 61 chr17 14200752 14200999 -81071652 - L1_Mur2 LINE L1 -6322 764 507 1 693 9523 60 2 0 chr17 14201135 14203031 -81069620 - L1Md_F2 LINE L1 -12 6570 4671 1 693 262 163 37 37 chr17 14203151 14203259 -81069392 + (TG)n Simple_repeat Simple_repeat 1 108 0 1 693 207 100 0 0 chr17 14205210 14205240 -81067411 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 693 27 0 0 0 chr17 14206235 14206262 -81066389 + AT_rich Low_complexity Low_complexity 1 27 0 1 693 2976 86 13 0 chr17 14207695 14208090 -81064561 - MTB LTR MaLR 0 400 1 1 693 677 233 131 0 chr17 14208506 14208682 -81063969 - B3 SINE B2 -4 212 14 1 693 25 31 0 0 chr17 14208855 14208887 -81063764 + AT_rich Low_complexity Low_complexity 1 32 0 1 693 780 76 102 0 chr17 14209650 14209768 -81062883 - L1Md_F3 LINE L1 -14 6573 6444 1 693 1139 14 0 0 chr17 14209768 14209908 -81062743 + MTA_Mm LTR MaLR 1 140 -256 1 693 3170 80 103 50 chr17 14209908 14210463 -81062188 - RLTR6_Mm LTR ERV1 -70 584 1 1 693 17234 31 56 3 chr17 14210463 14212611 -81060040 - MMVL30-int LTR ERV1 0 3698 1437 1 693 5377 61 27 9 chr17 14212625 14213320 -81059331 - MMVL30-int LTR ERV1 -2219 1479 772 1 693 263 115 19 0 chr17 14213669 14213721 -81058930 - MMVL30-int LTR ERV1 -2922 377 325 1 693 6693 19 42 17 chr17 14213747 14214556 -81058095 - RLTR6-int LTR ERV1 -6949 829 1 1 693 3313 80 99 49 chr17 14214556 14215132 -81057519 - RLTR6_Mm LTR ERV1 -49 605 1 1 693 2089 15 4 0 chr17 14215132 14215391 -81057260 + MTA_Mm LTR MaLR 137 396 0 1 693 37888 64 7 8 chr17 14215391 14221439 -81051212 - L1Md_F3 LINE L1 -139 6448 471 1 693 7174 95 3 25 chr17 14224597 14225947 -81046704 - L1_Mus2 LINE L1 0 6566 5247 1 693 281 300 0 0 chr17 14226402 14226492 -81046159 + L1MA9 LINE L1 6217 6306 -6 1 693 342 0 0 0 chr17 14226567 14226605 -81046046 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 693 4578 41 0 0 chr17 14227257 14227798 -81044853 - L1Md_A LINE L1 0 6582 6042 1 693 2991 40 0 0 chr17 14227798 14228152 -81044499 + L1Md_F2 LINE L1 5233 5586 -297 1 693 8057 52 3 2 chr17 14228152 14229145 -81043506 + L1Md_F2 LINE L1 5587 6580 -2 1 693 1292 238 43 8 chr17 14229145 14229188 -81043463 + L1M3 LINE L1 5616 5672 -499 1 693 235 310 56 22 chr17 14229915 14229928 -81042723 - ID_B1 SINE B4 -130 94 3 1 693 266 329 26 0 chr17 14229928 14230004 -81042647 - ID4 SINE ID -3 80 3 2 693 2878 12 0 3 chr17 14231398 14231721 -81040930 + RLTRETN_Mm LTR ERVK 1 322 0 2 693 42753 17 2 3 chr17 14231721 14236572 -81036079 + MMETn-int LTR ERVK 1 4844 0 2 693 2903 9 0 3 chr17 14236572 14236895 -81035756 + RLTRETN_Mm LTR ERVK 1 322 0 2 693 453 131 0 0 chr17 14237609 14237693 -81034958 + (TG)n Simple_repeat Simple_repeat 2 85 0 2 693 359 21 21 0 chr17 14237813 14237861 -81034790 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 2 693 183 129 0 0 chr17 14241061 14241092 -81031559 + (CTG)n Simple_repeat Simple_repeat 2 32 0 2 693 356 281 50 84 chr17 14243474 14243676 -81028975 + L1M2 LINE L1 3101 3295 -2848 2 693 437 262 34 14 chr17 14244688 14244855 -81027796 + B4 SINE B4 81 252 -40 2 693 6328 20 0 0 chr17 14244856 14245569 -81027082 + L1Md_A LINE L1 5870 6582 0 2 693 349 322 0 6 chr17 14245795 14245967 -81026684 + (CA)n Simple_repeat Simple_repeat 2 172 0 2 693 229 250 0 14 chr17 14245984 14246053 -81026598 + (CA)n Simple_repeat Simple_repeat 1 68 0 2 693 329 304 25 50 chr17 14246526 14246647 -81026004 + B4A SINE B4 24 141 -151 2 693 1026 196 27 5 chr17 14248036 14248257 -81024394 - L1_Mur2 LINE L1 -3463 2414 2189 2 693 368 291 107 49 chr17 14248370 14248594 -81024057 - L1_Mur2 LINE L1 -6322 764 528 2 693 282 296 34 0 chr17 14249993 14250081 -81022570 - RMER30 DNA MER1_type 0 202 112 2 693 310 318 110 83 chr17 14250170 14250424 -81022227 + ORR1E LTR MaLR 88 348 -11 2 693 235 211 42 14 chr17 14250826 14250898 -81021753 + (CA)n Simple_repeat Simple_repeat 1 74 0 2 693 243 140 0 0 chr17 14250913 14250963 -81021688 + (CTCA)n Simple_repeat Simple_repeat 1 50 0 2 693 436 341 0 6 chr17 14250985 14251165 -81021486 + (CA)n Simple_repeat Simple_repeat 1 179 0 2 693 344 333 0 7 chr17 14251194 14251336 -81021315 + (CA)n Simple_repeat Simple_repeat 1 141 0 2 693 612 316 80 37 chr17 14251587 14251912 -81020739 - MER82 DNA MER2_type -234 419 81 2 693 497 183 63 87 chr17 14254031 14254157 -81018494 + MTC-int LTR MaLR 1166 1256 -2 2 693 228 35 0 0 chr17 14254352 14254381 -81018270 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2 693 2669 67 6 3 chr17 14254776 14255123 -81017528 - L1_Mus2 LINE L1 0 6566 6219 2 693 295 366 0 7 chr17 14255650 14255785 -81016866 - B1F SINE Alu -11 138 5 2 693 212 319 65 11 chr17 14255977 14256069 -81016582 - MIR SINE MIR -59 203 107 2 693 195 42 0 0 chr17 14257123 14257147 -81015504 + (TC)n Simple_repeat Simple_repeat 2 25 0 2 693 2994 149 43 31 chr17 14258179 14258733 -81013918 + RLTR31_Mm LTR ERVK 1 561 0 2 693 501 17 0 0 chr17 14258736 14258794 -81013857 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 693 273 168 174 18 chr17 14258984 14259078 -81013573 + Lx LINE L1 6346 6411 -243 2 693 186 43 0 0 chr17 14259989 14260012 -81012639 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 2 693 246 62 0 0 chr17 14260211 14260243 -81012408 + (T)n Simple_repeat Simple_repeat 1 32 0 2 693 324 224 10 98 chr17 14260243 14260436 -81012215 - RMER17C LTR ERVK -138 272 97 2 693 880 169 7 0 chr17 14260684 14260826 -81011825 + B1_Mus1 SINE Alu 5 147 -1 2 693 2115 36 4 0 chr17 14261006 14261257 -81011394 - L1Md_F3 LINE L1 -519 6063 5815 2 693 3890 43 21 2 chr17 14261257 14261728 -81010923 + L1Md_F3 LINE L1 6103 6582 -2 2 693 682 84 0 40 chr17 14261740 14261839 -81010812 + B1_Mus1 SINE Alu 2 96 -52 2 693 210 336 42 99 chr17 14262253 14262395 -81010256 + B4 SINE B4 7 140 -152 2 693 384 22 0 0 chr17 14262683 14262728 -81009923 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 693 189 0 0 0 chr17 14263490 14263511 -81009140 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 693 517 275 54 3 chr17 14264526 14264710 -81007941 + B4 SINE B4 81 275 -17 2 693 400 315 0 6 chr17 14264770 14265014 -81007637 + (CA)n Simple_repeat Simple_repeat 1 242 0 2 693 276 300 105 23 chr17 14265362 14265495 -81007156 + B4A SINE B4 2 145 -147 2 693 219 69 0 0 chr17 14265676 14265705 -81006946 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 693 408 99 0 0 chr17 14267009 14267080 -81005571 + (TCTG)n Simple_repeat Simple_repeat 2 72 0 2 693 450 0 0 0 chr17 14267081 14267131 -81005520 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 693 1300 244 48 11 chr17 14268643 14268983 -81003668 + ORR1D2 LTR MaLR 1 365 -2 2 693 677 164 117 0 chr17 14269522 14269650 -81003001 - MTC LTR MaLR 0 419 277 2 693 2018 189 34 38 chr17 14269680 14270192 -81002459 - RLTR20B3 LTR ERVK -45 532 1 2 693 1034 214 51 101 chr17 14270213 14270489 -81002162 - MTC LTR MaLR -154 267 6 2 693 256 242 16 0 chr17 14272307 14272369 -81000282 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 693 198 197 16 32 chr17 14272381 14272507 -81000144 + (TG)n Simple_repeat Simple_repeat 2 125 0 2 693 469 278 49 49 chr17 14272508 14272693 -80999958 - B3A SINE B2 -13 185 1 2 693 723 54 0 0 chr17 14273088 14273180 -80999471 + (TC)n Simple_repeat Simple_repeat 1 92 0 2 693 2825 150 16 24 chr17 14274324 14274823 -80997828 + Lx4B LINE L1 6560 7054 -4 2 693 1938 189 34 41 chr17 14275281 14275694 -80996957 + MTD LTR MaLR 4 413 -6 2 693 475 250 134 18 chr17 14275989 14276160 -80996491 - MER57F LTR ERV1 -70 366 176 2 693 237 161 113 0 chr17 14276197 14276259 -80996392 - MER57F LTR ERV1 -367 69 1 2 693 564 172 195 17 chr17 14277032 14277150 -80995501 + B1_Mur2 SINE Alu 2 140 -9 2 693 441 0 0 0 chr17 14277150 14277199 -80995452 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 693 385 318 0 9 chr17 14277672 14277783 -80994868 - PB1D10 SINE Alu -7 110 1 2 693 258 327 0 55 chr17 14277696 14277806 -80994845 - ID_B1 SINE B4 -57 167 64 2 693 790 281 72 62 chr17 14277936 14278243 -80994408 - MTE2a LTR MaLR -7 372 63 2 693 372 43 0 0 chr17 14280409 14280455 -80992196 + (TC)n Simple_repeat Simple_repeat 1 46 0 2 693 2055 117 39 42 chr17 14280456 14280814 -80991837 - Lx LINE L1 -17 6637 6281 2 693 248 326 10 42 chr17 14281057 14281153 -80991498 + MTEb LTR MaLR 273 365 -14 2 693 390 85 0 0 chr17 14282823 14282882 -80989769 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 693 371 307 136 6 chr17 14283160 14283337 -80989314 - MLT1K LTR MaLR -32 563 364 2 693 1413 64 27 0 chr17 14283988 14284175 -80988476 + B2_Mm1a SINE B2 2 193 0 2 693 1273 20 0 7 chr17 14285286 14285433 -80987218 + B1_Mus2 SINE Alu 2 147 0 2 693 198 0 0 0 chr17 14285467 14285489 -80987162 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2 693 1854 162 101 36 chr17 14285804 14286219 -80986432 - RMER10A LTR ERVL 0 442 1 2 86 207 315 33 0 chr17 14286773 14286865 -80985786 - MIRb SINE MIR -124 144 50 2 694 415 216 20 10 chr17 14288206 14288304 -80984347 - PB1D9 SINE Alu -7 113 15 2 694 1196 68 0 0 chr17 14288597 14288744 -80983907 - B1_Mus2 SINE Alu 0 147 1 2 694 335 231 117 55 chr17 14289112 14289240 -80983411 - Charlie1a DNA MER1_type -48 1407 1272 2 694 2212 124 229 25 chr17 14289246 14289717 -80982934 + RMER4B LTR ERVK 18 584 -1 2 694 410 285 83 38 chr17 14289717 14289811 -80982840 - Charlie1a DNA MER1_type -174 1281 1177 2 694 2682 44 3 0 chr17 14289811 14290129 -80982522 - L1_Mus1 LINE L1 0 6567 6249 2 694 410 285 83 38 chr17 14290129 14290190 -80982461 - Charlie1a DNA MER1_type -279 1176 1119 2 694 286 312 0 0 chr17 14290215 14290295 -80982356 + (TG)n Simple_repeat Simple_repeat 1 80 0 2 694 290 269 40 40 chr17 14290442 14290566 -80982085 - Charlie1a DNA MER1_type -567 888 765 2 694 450 0 0 0 chr17 14290886 14290936 -80981715 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 694 1385 80 0 26 chr17 14291559 14291752 -80980899 - B2_Mm2 SINE B2 -5 190 3 2 694 234 0 0 0 chr17 14292832 14292858 -80979793 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2 694 340 333 34 21 chr17 14294269 14294502 -80978149 + L1M2a LINE L1 1755 1990 -5178 2 694 301 356 94 28 chr17 14295192 14295446 -80977205 - L1MB4 LINE L1 -4460 2289 2019 2 694 2183 144 0 25 chr17 14295596 14295952 -80976699 - Lx5 LINE L1 -479 6571 6225 2 694 394 225 0 24 chr17 14296008 14296090 -80976561 - ID4_ SINE ID 0 83 4 2 694 343 311 20 7 chr17 14296109 14296310 -80976341 - L1MB4 LINE L1 -5772 873 576 2 694 504 0 0 0 chr17 14296428 14296484 -80976167 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 2 694 1483 251 72 9 chr17 14296697 14297043 -80975608 - MTEa LTR MaLR 0 379 12 2 694 260 333 132 7 chr17 14297285 14297436 -80975215 + MLT1J LTR MaLR 340 509 -3 2 694 293 290 140 48 chr17 14298964 14299192 -80973459 - MER89 LTR ERV1 -86 473 225 2 694 567 157 29 40 chr17 14299330 14299606 -80973045 + (TG)n Simple_repeat Simple_repeat 1 272 0 2 694 255 341 114 38 chr17 14299610 14299741 -80972910 - MER115 DNA Tip100 -315 378 238 2 694 378 337 114 11 chr17 14301282 14301351 -80971300 + B4A SINE B4 1 79 -213 2 694 1006 58 13 19 chr17 14301351 14301509 -80971142 + (GGAGA)n Simple_repeat Simple_repeat 5 161 0 2 694 378 337 114 11 chr17 14301509 14301703 -80970948 + B4A SINE B4 80 291 -1 2 694 245 237 17 0 chr17 14301703 14301762 -80970889 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 694 225 0 0 0 chr17 14301890 14301915 -80970736 + (T)n Simple_repeat Simple_repeat 1 25 0 2 694 333 0 0 0 chr17 14302394 14302431 -80970220 + (TC)n Simple_repeat Simple_repeat 1 37 0 2 694 203 184 0 0 chr17 14303772 14303810 -80968841 + (TGAA)n Simple_repeat Simple_repeat 2 39 0 2 694 1700 152 21 74 chr17 14303917 14304350 -80968301 + RMER17C LTR ERVK 1 410 0 2 694 345 274 148 0 chr17 14305281 14305416 -80967235 - HAL1-3A_ME LINE L1 -419 2439 2285 2 694 308 319 66 16 chr17 14305393 14305553 -80967098 - HAL1-3A_ME LINE L1 -67 2791 2668 2 694 306 0 0 0 chr17 14307660 14307694 -80964957 + (TCTG)n Simple_repeat Simple_repeat 3 36 0 2 694 226 239 28 56 chr17 14308644 14308715 -80963936 + Tigger12 DNA MER2_type 1032 1100 -859 2 694 331 254 23 109 chr17 14309636 14309764 -80962887 - PB1D9 SINE Alu 0 120 4 2 694 381 62 46 0 chr17 14312038 14312103 -80960548 + (CA)n Simple_repeat Simple_repeat 2 69 0 2 694 567 190 77 8 chr17 14312320 14312437 -80960214 + MTD LTR MaLR 281 405 -14 2 694 658 173 18 12 chr17 14313916 14314080 -80958571 + CT-rich Low_complexity Low_complexity 2 166 0 2 694 189 74 0 0 chr17 14314723 14314750 -80957901 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 2 694 474 244 176 30 chr17 14314769 14314934 -80957717 - B3A SINE B2 -9 189 1 2 694 515 56 0 14 chr17 14314944 14315016 -80957635 + (TTTC)n Simple_repeat Simple_repeat 3 73 0 3 694 3555 15 5 0 chr17 14316770 14317164 -80955487 + MTA_Mm LTR MaLR 1 396 0 3 694 9263 35 4 1 chr17 14317164 14318259 -80954392 + MTA_Mm-int LTR MaLR 1 1098 0 3 694 3555 15 5 0 chr17 14318259 14318653 -80953998 + MTA_Mm LTR MaLR 1 396 0 3 694 225 128 0 0 chr17 14318949 14318996 -80953655 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 694 618 208 103 15 chr17 14319014 14319209 -80953442 - Lx9 LINE L1 0 7644 7433 3 694 378 0 0 0 chr17 14319209 14319251 -80953400 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 694 180 0 0 0 chr17 14320989 14321009 -80951642 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 3 694 201 103 88 0 chr17 14322346 14322414 -80950237 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 3 694 814 291 35 11 chr17 14322455 14322740 -80949911 - B4 SINE B4 0 292 1 3 694 661 303 102 23 chr17 14323363 14323667 -80948984 - MLT1A0 LTR MaLR -34 331 4 3 694 197 132 26 0 chr17 14323873 14323911 -80948740 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 3 694 195 184 0 0 chr17 14323943 14323981 -80948670 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 694 1103 100 18 0 chr17 14325962 14326132 -80946519 + (GGAGAA)n Simple_repeat Simple_repeat 3 175 0 3 694 200 366 24 8 chr17 14326290 14326414 -80946237 + G-rich Low_complexity Low_complexity 6 131 0 3 694 740 164 72 29 chr17 14327038 14327176 -80945475 + B1_Mur2 SINE Alu 5 148 -1 3 694 576 127 18 9 chr17 14328896 14329007 -80943644 + CT-rich Low_complexity Low_complexity 3 114 0 3 694 758 188 36 14 chr17 14329008 14329148 -80943503 - B1_Mur3 SINE Alu -5 144 2 3 694 24 32 0 0 chr17 14329272 14329303 -80943348 + AT_rich Low_complexity Low_complexity 1 31 0 3 694 1694 268 36 49 chr17 14329498 14330032 -80942619 + RMER5 LTR ERV1 1 527 -7 3 694 753 41 0 0 chr17 14330693 14330790 -80941861 + (GA)n Simple_repeat Simple_repeat 2 98 0 3 694 394 238 127 89 chr17 14330985 14331142 -80941509 + MTE-int LTR MaLR 1303 1465 -115 3 694 557 279 91 43 chr17 14331178 14331486 -80941165 + ORR1E LTR MaLR 2 341 -29 3 694 24 77 0 0 chr17 14332067 14332119 -80940532 + AT_rich Low_complexity Low_complexity 1 52 0 3 694 24 0 0 0 chr17 14332357 14332381 -80940270 + GC_rich Low_complexity Low_complexity 1 24 0 3 694 258 143 48 0 chr17 14335758 14335821 -80936830 + (TA)n Simple_repeat Simple_repeat 1 66 0 3 694 24 32 0 0 chr17 14335880 14335911 -80936740 + AT_rich Low_complexity Low_complexity 1 31 0 3 694 510 46 0 0 chr17 14336510 14336575 -80936076 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 694 193 317 11 58 chr17 14337537 14337624 -80935027 + L2 LINE L2 1928 2010 -1409 3 694 261 0 0 0 chr17 14338047 14338076 -80934575 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 3 694 181 98 49 0 chr17 14339119 14339160 -80933491 + (CCCCCA)n Simple_repeat Simple_repeat 3 45 0 3 694 22 0 0 0 chr17 14340066 14340088 -80932563 + AT_rich Low_complexity Low_complexity 1 22 0 3 694 24 53 0 0 chr17 14341013 14341051 -80931600 + AT_rich Low_complexity Low_complexity 1 38 0 3 694 227 162 203 81 chr17 14341887 14341961 -80930690 - B1F SINE Alu 0 149 67 3 694 510 336 78 16 chr17 14342304 14342737 -80929914 - L1M4 LINE L1 -1353 4793 4334 3 694 217 322 74 0 chr17 14343281 14343402 -80929249 + L2 LINE L2 2739 2868 -551 3 694 203 270 38 48 chr17 14345455 14345522 -80927129 + (TATATG)n Simple_repeat Simple_repeat 6 74 0 3 694 213 65 0 0 chr17 14345522 14345553 -80927098 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 694 393 75 0 0 chr17 14345553 14345606 -80927045 + (TA)n Simple_repeat Simple_repeat 2 54 0 3 694 203 270 38 48 chr17 14345606 14345642 -80927009 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 3 694 195 177 16 31 chr17 14345673 14345737 -80926914 + (TATG)n Simple_repeat Simple_repeat 4 66 0 3 694 244 309 18 53 chr17 14345739 14345910 -80926741 + (TATATG)n Simple_repeat Simple_repeat 6 170 0 3 694 231 36 0 0 chr17 14346053 14346081 -80926570 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 694 314 227 6 11 chr17 14346415 14346490 -80926161 + MTEa LTR MaLR 1 73 -306 3 694 1462 167 160 57 chr17 14346767 14347136 -80925515 - MTD LTR MaLR 0 419 13 3 694 549 0 0 0 chr17 14349309 14349370 -80923281 + (TC)n Simple_repeat Simple_repeat 2 62 0 3 694 237 229 26 79 chr17 14349375 14349451 -80923200 - ID4_ SINE ID -10 73 2 3 694 225 0 0 0 chr17 14349463 14349488 -80923163 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3 694 351 0 0 0 chr17 14352072 14352111 -80920540 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 3 694 1246 38 19 6 chr17 14352111 14352268 -80920383 - B2_Mm2 SINE B2 -35 160 2 3 694 751 223 22 0 chr17 14352447 14352586 -80920065 - RSINE1 SINE B4 -21 144 3 3 694 336 77 0 0 chr17 14352589 14352641 -80920010 + (TATG)n Simple_repeat Simple_repeat 4 55 0 3 694 788 194 7 7 chr17 14352643 14352783 -80919868 - B1_Mur2 SINE Alu -8 141 2 3 694 382 202 45 0 chr17 14354555 14354644 -80918007 + L1Md_F3 LINE L1 6480 6572 -12 3 694 869 241 92 123 chr17 14354745 14355134 -80917517 + MTE2b LTR MaLR 3 379 0 3 694 36 0 0 0 chr17 14356466 14356502 -80916149 + AT_rich Low_complexity Low_complexity 1 36 0 3 694 3963 70 16 2 chr17 14356509 14357025 -80915626 - L1_Mus2 LINE L1 -2 6564 6042 3 694 309 172 0 0 chr17 14357917 14357981 -80914670 + (TG)n Simple_repeat Simple_repeat 1 64 0 3 694 652 123 0 17 chr17 14358534 14358650 -80914001 + (GGGGA)n Simple_repeat Simple_repeat 1 114 0 3 694 620 258 24 30 chr17 14358750 14358918 -80913733 + B4A SINE B4 44 210 -82 3 694 7189 142 21 26 chr17 14359528 14361192 -80911459 - Lx3C LINE L1 -39 6937 5289 3 694 5279 65 6 0 chr17 14361196 14361856 -80910795 - L1_Mus2 LINE L1 -1 6565 5902 3 694 385 89 0 0 chr17 14361868 14361924 -80910727 - Lx3C LINE L1 -839 5047 4992 3 694 5257 133 2 41 chr17 14362082 14362852 -80909799 - L1_Mm LINE L1 0 5883 5149 3 694 298 0 23 23 chr17 14362852 14362895 -80909756 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 694 5257 133 2 41 chr17 14362895 14363055 -80909596 - L1_Mm LINE L1 -735 5148 4989 3 694 180 266 62 0 chr17 14363451 14363515 -80909136 + L2b LINE L2 3272 3339 -36 3 694 820 149 29 0 chr17 14363707 14363881 -80908770 + GA-rich Low_complexity Low_complexity 2 180 0 3 694 354 236 24 12 chr17 14364327 14364494 -80908157 + GA-rich Low_complexity Low_complexity 2 170 0 3 694 416 295 39 98 chr17 14365628 14365831 -80906820 + RMER30 DNA MER1_type 10 200 -2 3 694 228 67 0 0 chr17 14366371 14366401 -80906250 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 694 261 0 0 0 chr17 14366401 14366429 -80906222 + (GA)n Simple_repeat Simple_repeat 1 29 0 3 694 577 129 17 0 chr17 14366441 14366557 -80906094 + (TG)n Simple_repeat Simple_repeat 1 118 0 3 694 201 224 0 0 chr17 14366646 14366704 -80905947 + (TTCA)n Simple_repeat Simple_repeat 1 58 0 3 694 358 224 17 0 chr17 14366713 14366829 -80905822 + (TG)n Simple_repeat Simple_repeat 2 119 0 3 694 555 208 0 0 chr17 14366851 14366947 -80905704 - RLTR18B LTR ERVK -407 105 10 3 694 740 180 6 0 chr17 14366952 14367113 -80905538 + (TG)n Simple_repeat Simple_repeat 1 162 0 3 694 219 228 35 0 chr17 14367129 14367186 -80905465 + (TTCA)n Simple_repeat Simple_repeat 3 61 0 3 694 575 243 183 0 chr17 14367554 14367723 -80904928 + B4 SINE B4 41 240 -52 3 694 389 245 63 44 chr17 14367923 14368081 -80904570 - MER5B DNA MER1_type 0 178 18 3 694 757 59 43 36 chr17 14368879 14369019 -80903632 + (TCCCC)n Simple_repeat Simple_repeat 5 145 0 3 694 180 273 71 18 chr17 14369771 14369827 -80902824 - L3 LINE CR1 -4312 177 119 3 694 303 305 82 30 chr17 14370640 14370775 -80901876 - MLT1B LTR MaLR -248 142 1 3 694 225 108 0 0 chr17 14372510 14372547 -80900104 + (CAGAG)n Simple_repeat Simple_repeat 4 40 0 3 694 626 297 31 5 chr17 14375961 14376154 -80896497 - MLT1D LTR MaLR -6 499 302 3 694 453 266 163 40 chr17 14376348 14376575 -80896076 + RMER15 LTR ERVL 307 561 -14 3 694 379 314 49 77 chr17 14376584 14376767 -80895884 - MLT1D LTR MaLR -306 199 22 3 694 188 275 101 70 chr17 14376883 14377012 -80895639 - MER5A DNA MER1_type -7 182 50 3 694 219 96 58 0 chr17 14377316 14377368 -80895283 + CT-rich Low_complexity Low_complexity 2 56 0 3 694 1636 334 164 50 chr17 14377495 14378881 -80893770 + MTE-int LTR MaLR 2 1544 -36 3 694 959 117 14 7 chr17 14379302 14379448 -80893203 - B1_Mus2 SINE Alu 0 147 1 3 694 21 36 0 0 chr17 14379450 14379478 -80893173 + AT_rich Low_complexity Low_complexity 1 28 0 3 694 605 294 75 72 chr17 14379660 14380048 -80892603 - L1MA4 LINE L1 -369 5931 5543 3 694 227 229 95 54 chr17 14380086 14380160 -80892491 + RLTR12B LTR ERVK 149 225 -303 3 694 459 252 8 8 chr17 14380495 14380615 -80892036 - MER121 Unknown Unknown -233 179 60 3 694 535 209 4 35 chr17 14383916 14384149 -80888502 + (TA)n Simple_repeat Simple_repeat 1 225 0 3 694 787 293 76 18 chr17 14384150 14384197 -80888454 - MT2A LTR ERVL -40 493 448 3 694 198 0 0 0 chr17 14384197 14384219 -80888432 + (TA)n Simple_repeat Simple_repeat 1 22 0 3 694 787 293 76 18 chr17 14384219 14384501 -80888150 - MT2A LTR ERVL -86 447 145 3 694 255 312 71 20 chr17 14384513 14384611 -80888040 - MTEa LTR MaLR -259 120 18 3 694 592 369 71 52 chr17 14388847 14389647 -80883004 + HAL1 LINE L1 981 1795 -712 3 694 4056 79 24 11 chr17 14392117 14392667 -80879984 + L1_Mus4 LINE L1 6080 6636 0 3 694 1067 35 7 40 chr17 14394037 14394186 -80878465 + L1_Mus2 LINE L1 6422 6565 -1 3 694 495 310 31 44 chr17 14394533 14394759 -80877892 - L1MA4 LINE L1 -376 5924 5702 3 694 340 345 88 66 chr17 14395129 14395446 -80877205 - MLT1B LTR MaLR -48 342 19 3 694 590 287 161 80 chr17 14396022 14396408 -80876243 + BGLII_A LTR ERVK 2 418 -27 3 694 195 69 0 0 chr17 14396460 14396489 -80876162 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 4 694 275 256 138 72 chr17 14400685 14400866 -80871785 - L1M3 LINE L1 -709 5603 5411 4 694 784 225 67 162 chr17 14400868 14401239 -80871412 + MTE2a LTR MaLR 3 338 -41 4 694 414 333 183 20 chr17 14401298 14401549 -80871102 - L1M3 LINE L1 -887 5256 4965 4 694 818 290 56 63 chr17 14401549 14401931 -80870720 + MTD LTR MaLR 1 379 0 4 694 936 266 94 23 chr17 14401938 14402331 -80870320 - L1M3 LINE L1 -1181 4959 4539 4 694 270 300 14 0 chr17 14402511 14402581 -80870070 + (CA)n Simple_repeat Simple_repeat 1 71 0 4 694 317 354 51 25 chr17 14403268 14403465 -80869186 - L1MD LINE L1 -1483 4663 4462 4 694 555 118 0 0 chr17 14403652 14403737 -80868914 + (TTTC)n Simple_repeat Simple_repeat 4 88 0 4 694 226 349 46 17 chr17 14403751 14403926 -80868725 - L1MD LINE L1 -1886 4260 4081 4 694 605 304 184 9 chr17 14404991 14405323 -80867328 + MLT2D LTR ERVL 6 395 -19 4 694 210 37 0 0 chr17 14405917 14405944 -80866707 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 694 279 79 0 0 chr17 14405946 14405984 -80866667 + (TGG)n Simple_repeat Simple_repeat 1 38 0 4 694 444 118 58 29 chr17 14406025 14406199 -80866452 + (TG)n Simple_repeat Simple_repeat 1 179 0 4 694 207 156 0 0 chr17 14406229 14406261 -80866390 + (TGG)n Simple_repeat Simple_repeat 1 32 0 4 694 206 137 59 0 chr17 14407051 14407102 -80865549 + G-rich Low_complexity Low_complexity 2 55 0 4 694 232 275 120 40 chr17 14407108 14407233 -80865418 + MLT1-int LTR MaLR 358 492 -879 4 694 694 248 0 40 chr17 14407447 14407598 -80865053 - RSINE1 SINE B4 -19 146 2 4 694 22 70 0 0 chr17 14407653 14407696 -80864955 + AT_rich Low_complexity Low_complexity 1 43 0 4 694 562 302 125 87 chr17 14407731 14408227 -80864424 + RMER20A LTR ERVK 1 515 -1 4 694 1316 259 93 42 chr17 14408359 14408554 -80864097 - Lx9 LINE L1 -230 7414 7193 4 694 1086 157 398 7 chr17 14408554 14408700 -80863951 + ORR1D1 LTR MaLR 1 164 -210 4 694 564 56 0 0 chr17 14408700 14408772 -80863879 + (TC)n Simple_repeat Simple_repeat 1 72 0 4 694 1086 157 398 7 chr17 14408772 14408894 -80863757 + ORR1D1 LTR MaLR 165 373 -1 4 694 1316 259 93 42 chr17 14408894 14409194 -80863457 - Lx9 LINE L1 -452 7192 6895 4 694 752 181 28 21 chr17 14411023 14411164 -80861487 + B1_Mur3 SINE Alu 1 142 -7 4 694 1438 74 5 5 chr17 14411240 14411431 -80861220 - B2_Mm1a SINE B2 -2 191 1 4 694 330 91 0 0 chr17 14411754 14411809 -80860842 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 694 279 239 10 42 chr17 14411809 14411905 -80860746 + (CAGAGA)n Simple_repeat Simple_repeat 5 97 0 4 694 389 141 14 0 chr17 14414803 14414874 -80857777 + (CAT)n Simple_repeat Simple_repeat 3 74 0 4 694 392 282 89 49 chr17 14415106 14415330 -80857321 - RMER15 LTR ERVL 0 575 343 4 694 23 33 0 0 chr17 14416410 14416440 -80856211 + GC_rich Low_complexity Low_complexity 1 30 0 4 695 263 226 238 0 chr17 14419068 14419152 -80853499 + MIRb SINE MIR 89 192 -76 4 695 838 157 28 7 chr17 14422265 14422406 -80850245 + B1_Mur4 SINE Alu 6 149 -1 4 695 243 0 0 0 chr17 14422444 14422471 -80850180 + (CCAA)n Simple_repeat Simple_repeat 1 27 0 4 695 1151 285 7 18 chr17 14422689 14422975 -80849676 + B4 SINE B4 2 284 -8 4 695 348 119 0 0 chr17 14423012 14423071 -80849580 + (CA)n Simple_repeat Simple_repeat 1 59 0 4 695 591 207 20 12 chr17 14423517 14423780 -80848871 + GA-rich Low_complexity Low_complexity 1 265 0 4 695 203 254 17 17 chr17 14425102 14425162 -80847489 - L3 LINE CR1 -2770 1719 1660 4 695 228 67 0 0 chr17 14426050 14426080 -80846571 + (GGGAGA)n Simple_repeat Simple_repeat 3 32 0 4 695 206 0 130 0 chr17 14426077 14426131 -80846520 + (CAGG)n Simple_repeat Simple_repeat 2 62 0 4 695 482 273 28 28 chr17 14426131 14426274 -80846377 - B3A SINE B2 -55 143 1 4 695 1022 46 23 0 chr17 14426359 14426489 -80846162 - B1_Mus1 SINE Alu -5 143 11 4 695 21 0 0 0 chr17 14426674 14426695 -80845956 + AT_rich Low_complexity Low_complexity 1 21 0 4 695 1699 219 39 22 chr17 14429817 14430181 -80842470 - ORR1D2 LTR MaLR 0 370 1 4 695 4448 248 81 42 chr17 14430181 14431495 -80841156 - ORR1D2-int LTR MaLR 0 1370 5 4 695 1139 223 177 19 chr17 14431499 14431815 -80840836 - ORR1D2 LTR MaLR 0 370 5 4 695 292 327 39 0 chr17 14432025 14432129 -80840522 - MIR SINE MIR -103 159 52 4 695 1210 209 26 78 chr17 14433678 14434086 -80838565 - ORR1E LTR MaLR 0 384 1 4 695 898 133 7 13 chr17 14434086 14434238 -80838413 - ORR1E-int LTR MaLR 0 1370 1220 4 695 2939 241 42 63 chr17 14434232 14434679 -80837972 - ORR1E-int LTR MaLR -384 986 548 4 695 1136 70 28 0 chr17 14434679 14434822 -80837829 - B1_Mm SINE Alu 0 147 1 4 695 2939 257 38 84 chr17 14434822 14435346 -80837305 - ORR1E-int LTR MaLR -823 547 68 4 695 503 170 51 3 chr17 14435748 14435849 -80836802 + B1F2 SINE Alu 36 143 -6 4 695 1394 208 75 51 chr17 14435953 14435983 -80836668 - ORR1E LTR MaLR -2 357 329 4 695 278 50 0 24 chr17 14435983 14436024 -80836627 + (CAGA)n Simple_repeat Simple_repeat 4 43 0 4 695 1394 208 75 51 chr17 14436024 14436327 -80836324 - ORR1E LTR MaLR -31 328 18 4 695 742 91 45 0 chr17 14437983 14438137 -80834514 + (TCTA)n Simple_repeat Simple_repeat 2 162 0 4 695 991 53 113 0 chr17 14438216 14438349 -80834302 - B1_Mus1 SINE Alu 0 148 1 4 695 301 242 40 20 chr17 14438401 14438502 -80834149 - BC1_Mm scRNA scRNA -37 115 13 4 695 266 292 0 45 chr17 14440496 14440672 -80831979 + (CTAGG)n Simple_repeat Simple_repeat 2 169 0 4 695 859 222 46 0 chr17 14440871 14441065 -80831586 - B3 SINE B2 -12 204 2 4 695 309 354 85 24 chr17 14441143 14441473 -80831178 - L1MB2 LINE L1 -74 6097 5748 4 695 644 303 155 21 chr17 14441563 14441853 -80830798 + ORR1E LTR MaLR 28 356 -3 4 695 351 245 25 64 chr17 14441988 14442145 -80830506 - L1MB2 LINE L1 -643 5525 5375 4 695 809 307 70 26 chr17 14442213 14442711 -80829940 - L1MB2 LINE L1 -863 5277 4758 4 695 180 176 0 0 chr17 14444348 14444382 -80828269 + G-rich Low_complexity Low_complexity 2 35 0 4 695 383 221 26 20 chr17 14445196 14445348 -80827303 + (TATATG)n Simple_repeat Simple_repeat 6 158 0 4 695 543 168 16 51 chr17 14445331 14445591 -80827060 + (TATG)n Simple_repeat Simple_repeat 1 250 0 4 695 325 326 14 50 chr17 14445595 14445734 -80826917 - HAL1-3A_ME LINE L1 -831 2027 1894 4 695 186 43 0 0 chr17 14446572 14446595 -80826056 + (TTG)n Simple_repeat Simple_repeat 3 25 0 4 695 363 266 6 6 chr17 14446780 14446963 -80825688 + (TG)n Simple_repeat Simple_repeat 1 183 0 4 695 731 285 187 62 chr17 14447475 14448097 -80824554 + L1M4c LINE L1 124 792 -5592 4 695 258 32 0 0 chr17 14448097 14448128 -80824523 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 695 731 285 187 62 chr17 14448128 14448556 -80824095 + L1M4c LINE L1 793 1305 -5079 4 695 303 324 7 21 chr17 14450160 14450305 -80822346 + (CA)n Simple_repeat Simple_repeat 1 143 0 4 695 1585 194 99 19 chr17 14451894 14451981 -80820670 - MTC LTR MaLR 0 421 321 4 695 3699 109 135 31 chr17 14451981 14452290 -80820361 + RMER17A LTR ERVK 1 320 -431 4 695 561 55 0 0 chr17 14452290 14452363 -80820288 + (TCCCC)n Simple_repeat Simple_repeat 5 77 0 4 695 3699 109 135 31 chr17 14452363 14452733 -80819918 + RMER17A LTR ERVK 321 750 -1 4 695 1585 194 99 19 chr17 14452733 14453018 -80819633 - MTC LTR MaLR -101 320 20 4 695 240 294 104 77 chr17 14453919 14454217 -80818434 - MamRep1161 DNA TcMar -574 383 78 4 695 234 382 24 0 chr17 14454249 14454372 -80818279 + Charlie5 DNA MER1_type 1 126 -2498 4 695 378 0 0 0 chr17 14455689 14455731 -80816920 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 695 342 0 0 0 chr17 14456154 14456192 -80816459 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 695 691 184 0 9 chr17 14456308 14456423 -80816228 + B3 SINE B2 1 114 -102 4 695 24 0 0 0 chr17 14456476 14456500 -80816151 + AT_rich Low_complexity Low_complexity 1 24 0 4 695 243 0 0 0 chr17 14456809 14456836 -80815815 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 695 513 0 0 0 chr17 14456836 14456892 -80815759 + (GA)n Simple_repeat Simple_repeat 2 58 0 4 695 631 267 87 0 chr17 14457026 14457221 -80815430 - ID_B1 SINE B4 -12 212 1 4 695 465 19 0 0 chr17 14457806 14457860 -80814791 + (TC)n Simple_repeat Simple_repeat 1 54 0 4 695 387 0 0 0 chr17 14457860 14457902 -80814749 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 695 230 222 31 16 chr17 14459219 14459283 -80813368 + GA-rich Low_complexity Low_complexity 6 70 0 4 695 211 365 0 86 chr17 14459804 14459897 -80812754 - MIRb SINE MIR -66 202 118 4 695 6354 63 1 0 chr17 14460254 14461031 -80811620 + L1_Mus1 LINE L1 5790 6567 0 4 695 279 345 0 12 chr17 14461863 14461948 -80810703 + PB1D10 SINE Alu 12 95 -22 4 695 923 247 5 5 chr17 14462862 14463061 -80809590 - ID_B1 SINE B4 -7 217 19 4 695 505 266 0 0 chr17 14463675 14463788 -80808863 + PB1D10 SINE Alu 2 114 -3 4 695 325 264 250 33 chr17 14463801 14463882 -80808769 + ID_B1 SINE B4 1 224 0 4 695 382 220 87 29 chr17 14463882 14463985 -80808666 + PB1D10 SINE Alu 9 117 0 4 695 200 303 30 0 chr17 14464409 14464475 -80808176 + (CATG)n Simple_repeat Simple_repeat 1 68 0 4 695 206 333 0 0 chr17 14464447 14464513 -80808138 + (CA)n Simple_repeat Simple_repeat 1 66 0 4 695 765 222 124 9 chr17 14468844 14469110 -80803541 + MTD LTR MaLR 36 351 -49 4 695 636 14 0 0 chr17 14469426 14469499 -80803152 + (CA)n Simple_repeat Simple_repeat 2 74 0 4 695 32 57 0 0 chr17 14469811 14469864 -80802787 + AT_rich Low_complexity Low_complexity 1 53 0 4 695 647 274 40 0 chr17 14469894 14469928 -80802723 - B3A SINE B2 -15 183 147 4 695 437 34 17 0 chr17 14469928 14469987 -80802664 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 695 647 274 40 0 chr17 14469987 14470127 -80802524 - B3A SINE B2 -52 146 3 4 695 233 288 235 0 chr17 14470597 14470729 -80801922 + L1MB5 LINE L1 5923 6085 -89 4 695 225 0 0 0 chr17 14471652 14471677 -80800974 + (A)n Simple_repeat Simple_repeat 1 25 0 4 695 508 279 47 0 chr17 14471749 14471878 -80800773 + B4A SINE B4 10 144 -148 4 695 220 226 0 36 chr17 14471833 14471888 -80800763 + B1F2 SINE Alu 15 67 -82 4 695 28 61 0 0 chr17 14472429 14472478 -80800173 + AT_rich Low_complexity Low_complexity 1 49 0 4 695 742 148 11 0 chr17 14472480 14472656 -80799995 + (TCTA)n Simple_repeat Simple_repeat 2 179 0 4 695 620 266 14 20 chr17 14472723 14472869 -80799782 - RSINE1 SINE B4 -18 147 3 4 695 246 32 0 0 chr17 14476239 14476270 -80796381 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 695 326 247 30 18 chr17 14476270 14476435 -80796216 + (TATATG)n Simple_repeat Simple_repeat 6 172 0 4 695 332 230 6 44 chr17 14476418 14476600 -80796051 + (TATG)n Simple_repeat Simple_repeat 4 178 0 4 695 373 248 218 0 chr17 14477271 14477404 -80795247 - MT2A LTR ERVL -20 513 352 5 695 351 282 75 16 chr17 14478409 14478526 -80794125 - PB1D7 SINE Alu -26 122 6 5 695 192 77 0 0 chr17 14481229 14481255 -80791396 + (A)n Simple_repeat Simple_repeat 1 26 0 5 695 206 360 86 23 chr17 14481448 14481576 -80791075 - L2 LINE L2 -3253 166 31 5 695 243 0 0 0 chr17 14483154 14483181 -80789470 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 5 695 298 293 0 13 chr17 14485365 14485441 -80787210 - ID4 SINE ID -7 76 2 5 695 35 0 0 0 chr17 14485507 14485542 -80787109 + AT_rich Low_complexity Low_complexity 1 35 0 5 695 608 209 24 53 chr17 14486838 14486988 -80785663 - MTD LTR MaLR -14 405 232 5 695 230 317 47 39 chr17 14487000 14487128 -80785523 - MTD LTR MaLR -120 287 159 5 695 1100 109 11 0 chr17 14487151 14487325 -80785326 + (TATATG)n Simple_repeat Simple_repeat 2 177 0 5 695 270 257 40 26 chr17 14487410 14487486 -80785165 - MTD LTR MaLR -344 77 1 5 695 354 45 0 0 chr17 14488794 14488838 -80783813 + (GA)n Simple_repeat Simple_repeat 1 44 0 5 695 1964 186 8 24 chr17 14489240 14489620 -80783031 + ORR1D1 LTR MaLR 1 374 0 5 695 774 103 9 0 chr17 14492535 14492642 -80780009 + B1_Mus1 SINE Alu 40 147 -1 5 695 576 42 0 0 chr17 14492656 14492727 -80779924 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 5 695 244 226 115 35 chr17 14492803 14492890 -80779761 + RLTR13D6 LTR ERVK 63 156 -746 5 695 834 118 0 0 chr17 14495468 14495629 -80777022 + (CA)n Simple_repeat Simple_repeat 1 161 0 5 695 359 284 95 18 chr17 14496038 14496321 -80776330 - L1MC3 LINE L1 -1888 5897 5593 5 695 1378 202 143 3 chr17 14496371 14496679 -80775972 + ORR1D1 LTR MaLR 1 351 -23 5 695 272 167 0 0 chr17 14496767 14496815 -80775836 + ORR1D1-int LTR MaLR 53 100 -1270 5 695 2048 147 17 19 chr17 14496802 14497162 -80775489 + ORR1D1-int LTR MaLR 1011 1369 -1 5 695 368 193 171 0 chr17 14497212 14497300 -80775351 + ORR1D1 LTR MaLR 268 370 -4 5 695 265 267 106 52 chr17 14497311 14497539 -80775112 - L1MC3 LINE L1 -807 5526 5288 5 695 250 280 54 0 chr17 14497573 14497666 -80774985 - L1MC3 LINE L1 -919 5227 5130 5 695 324 0 0 0 chr17 14497791 14497827 -80774824 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 695 1146 239 60 30 chr17 14497834 14498132 -80774519 - RCHARR1 DNA MER1_type -93 881 575 5 695 234 203 24 129 chr17 14498124 14498172 -80774479 - RCHARR1 DNA MER1_type -657 317 272 5 695 369 0 0 0 chr17 14498172 14498213 -80774438 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 695 234 203 24 129 chr17 14498213 14498249 -80774402 - RCHARR1 DNA MER1_type -703 271 242 5 695 1736 120 101 55 chr17 14498226 14498534 -80774117 - MTC LTR MaLR -8 413 92 5 695 297 0 0 0 chr17 14498534 14498567 -80774084 + (TC)n Simple_repeat Simple_repeat 2 34 0 5 695 252 59 0 0 chr17 14498567 14498600 -80774051 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 695 420 264 147 0 chr17 14498623 14498752 -80773899 - RSINE1 SINE B4 -16 149 2 5 695 666 95 0 0 chr17 14499593 14499688 -80772963 + (TCCA)n Simple_repeat Simple_repeat 3 97 0 5 695 277 240 25 51 chr17 14500353 14500432 -80772219 + MER5A DNA MER1_type 38 114 -75 1 695 291 246 90 0 chr17 14501559 14501693 -80770958 - L1M5 LINE L1 -889 5257 5112 2 695 326 311 122 36 chr17 14502040 14502544 -80770107 - L1M5 LINE L1 -1487 4659 4105 2 695 444 342 125 0 chr17 14502889 14503073 -80769578 - MLT1A0 LTR MaLR -3 362 156 3 695 321 254 0 0 chr17 14503165 14503279 -80769372 + (CA)n Simple_repeat Simple_repeat 2 115 0 4 695 318 98 0 0 chr17 14503357 14503408 -80769243 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 695 411 73 0 0 chr17 14505422 14505477 -80767174 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 6 695 793 172 0 30 chr17 14506519 14506651 -80766000 + B3 SINE B2 3 130 -86 7 695 690 75 0 0 chr17 14506688 14506781 -80765870 + (GA)n Simple_repeat Simple_repeat 2 94 0 8 695 746 215 30 0 chr17 14507978 14508113 -80764538 - B3 SINE B2 -77 139 1 9 695 350 260 13 0 chr17 14510665 14510742 -80761909 - ID_B1 SINE B4 -1 223 146 1 695 363 60 0 0 chr17 14510774 14510824 -80761827 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 695 425 321 36 14 chr17 14510839 14510978 -80761673 - RSINE1 SINE B4 -10 155 14 1 695 305 253 88 0 chr17 14510988 14511072 -80761579 - ID_B1 SINE B4 -70 154 65 1 695 180 0 0 0 chr17 14512289 14512309 -80760342 + (CG)n Simple_repeat Simple_repeat 1 20 0 1 695 471 35 0 0 chr17 14512309 14512365 -80760286 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 695 416 308 8 0 chr17 14513808 14513925 -80758726 - ID_B1 SINE B4 -3 221 104 1 695 280 341 62 0 chr17 14513810 14513939 -80758712 - B1F1 SINE Alu -5 144 8 1 695 326 267 150 36 chr17 14515056 14515223 -80757428 + B3A SINE B2 10 195 -3 1 695 803 214 99 56 chr17 14515712 14515925 -80756726 - ID_B1 SINE B4 0 224 3 1 695 751 232 118 5 chr17 14516515 14516710 -80755941 - ID_B1 SINE B4 -6 218 2 1 695 477 0 0 0 chr17 14516819 14516872 -80755779 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 695 785 258 22 65 chr17 14518305 14518537 -80754114 - B4 SINE B4 -70 222 1 2 695 480 48 0 0 chr17 14518924 14518987 -80753664 + (TG)n Simple_repeat Simple_repeat 1 63 0 2 695 348 111 0 0 chr17 14518987 14519050 -80753601 + (GA)n Simple_repeat Simple_repeat 2 64 0 2 695 674 243 135 54 chr17 14520431 14520727 -80751924 - RLTR15 LTR ERVK -7 352 33 2 695 4573 85 49 78 chr17 14522643 14523412 -80749239 + RMER17A LTR ERVK 2 748 -3 2 695 222 62 0 0 chr17 14527339 14527371 -80745280 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 695 366 23 0 0 chr17 14533603 14533646 -80739005 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 695 632 77 10 0 chr17 14534753 14534857 -80737794 + (GA)n Simple_repeat Simple_repeat 1 105 0 2 695 237 65 0 0 chr17 14535056 14535087 -80737564 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 695 732 109 17 0 chr17 14535087 14535197 -80737454 - B1_Mus2 SINE Alu -8 139 28 3 695 473 0 0 17 chr17 14538798 14538856 -80733795 + (TTTTTG)n Simple_repeat Simple_repeat 3 59 0 3 695 985 252 10 0 chr17 14541836 14542042 -80730609 - B3 SINE B2 -7 209 2 3 695 186 310 76 54 chr17 14542099 14542191 -80730460 + MIRb SINE MIR 43 136 -132 3 695 554 271 17 40 chr17 14543148 14543321 -80729330 - HAL1-2a_MD LINE L1 -508 2516 2348 3 695 201 270 32 0 chr17 14543332 14543395 -80729256 + (ATGGTG)n Simple_repeat Simple_repeat 4 68 0 3 695 318 245 0 0 chr17 14543395 14543493 -80729158 + (CACCAT)n Simple_repeat Simple_repeat 5 102 0 3 695 256 286 0 12 chr17 14543571 14543656 -80728995 + (ATGGTG)n Simple_repeat Simple_repeat 4 87 0 3 695 25 51 0 0 chr17 14544375 14544414 -80728237 + AT_rich Low_complexity Low_complexity 1 39 0 3 695 314 290 89 10 chr17 14545632 14545733 -80726918 - PB1D7 SINE Alu -6 114 6 3 695 329 246 68 83 chr17 14546208 14546341 -80726310 + B1F SINE Alu 2 132 -17 4 696 699 269 83 0 chr17 14549546 14549739 -80722912 + B3 SINE B2 3 211 -5 4 696 477 0 0 0 chr17 14551227 14551280 -80721371 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 696 333 0 0 0 chr17 14551281 14551318 -80721333 + (CAGAGA)n Simple_repeat Simple_repeat 2 38 0 4 696 249 221 143 0 chr17 14552419 14552496 -80720155 + LTR16E1 LTR ERVL 451 538 0 4 696 213 304 8 34 chr17 14552669 14552788 -80719863 + (TATATG)n Simple_repeat Simple_repeat 6 121 0 4 696 300 292 83 8 chr17 14552830 14552951 -80719700 - Tigger7 DNA MER2_type -66 2425 2296 4 696 627 81 0 0 chr17 14552959 14553058 -80719593 + (TC)n Simple_repeat Simple_repeat 2 100 0 4 696 274 350 48 19 chr17 14553213 14553318 -80719333 - Tigger7 DNA MER2_type -2376 115 8 4 696 500 247 164 18 chr17 14553327 14553492 -80719159 + RMER30 DNA MER1_type 8 196 -6 4 696 2803 205 106 104 chr17 14555500 14556356 -80716295 + RMER13A LTR ERVK 3 860 0 4 696 31 44 0 0 chr17 14557215 14557260 -80715391 + AT_rich Low_complexity Low_complexity 1 45 0 5 696 207 0 0 0 chr17 14558068 14558091 -80714560 + (CAGCC)n Simple_repeat Simple_repeat 4 26 0 5 696 201 247 13 13 chr17 14559140 14559218 -80713433 + (TCTG)n Simple_repeat Simple_repeat 3 80 0 5 696 2456 51 11 2 chr17 14560984 14561311 -80711340 + IAPEY2_LTR LTR ERVK 32 467 -8 5 696 794 293 56 28 chr17 14561726 14562049 -80710602 - RLTR15 LTR ERVK -16 343 12 5 696 189 0 0 0 chr17 14562050 14562071 -80710580 + (TG)n Simple_repeat Simple_repeat 1 21 0 5 696 426 159 0 0 chr17 14562071 14562178 -80710473 + GA-rich Low_complexity Low_complexity 2 108 0 5 696 293 242 22 11 chr17 14562203 14562295 -80710356 + (CAGA)n Simple_repeat Simple_repeat 2 94 0 5 696 336 48 0 0 chr17 14562305 14562347 -80710304 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 696 423 0 0 0 chr17 14562347 14562393 -80710258 + (GA)n Simple_repeat Simple_repeat 2 48 0 5 696 573 308 125 37 chr17 14563598 14563895 -80708756 + MER121 Unknown Unknown 47 369 -43 6 696 335 282 141 0 chr17 14563941 14564026 -80708625 - B1F SINE Alu -51 98 2 6 696 629 152 0 7 chr17 14564558 14564697 -80707954 + CT-rich Low_complexity Low_complexity 2 139 0 6 696 355 363 98 5 chr17 14564885 14565109 -80707542 + MER44D DNA MER2_type 1 245 -460 6 696 253 311 102 48 chr17 14565369 14565403 -80707248 + MER44D DNA MER2_type 485 517 -188 6 696 479 280 138 14 chr17 14565403 14565548 -80707103 - RSINE1 SINE B4 0 165 3 6 696 253 311 102 48 chr17 14565548 14565699 -80706952 + MER44D DNA MER2_type 518 680 -25 6 696 273 197 0 0 chr17 14566152 14566213 -80706438 + (ATG)n Simple_repeat Simple_repeat 3 63 0 6 696 688 285 113 4 chr17 14566715 14566972 -80705679 + B4A SINE B4 1 285 -7 6 696 1469 211 119 24 chr17 14567920 14568290 -80704361 - MTD LTR MaLR -14 405 1 6 696 565 317 37 27 chr17 14568494 14568682 -80703969 + B4A SINE B4 1 190 -102 6 696 709 257 30 60 chr17 14568999 14569198 -80703453 + B3A SINE B2 7 199 -17 6 696 23 33 0 0 chr17 14569225 14569255 -80703396 + AT_rich Low_complexity Low_complexity 1 30 0 7 696 303 346 63 42 chr17 14573493 14573683 -80698968 - MLT1C LTR MaLR -206 261 68 7 696 203 340 10 10 chr17 14573696 14573797 -80698854 + (TG)n Simple_repeat Simple_repeat 1 101 0 7 696 456 62 0 0 chr17 14573818 14573882 -80698769 + (TG)n Simple_repeat Simple_repeat 2 65 0 7 696 217 278 0 0 chr17 14573897 14573951 -80698700 + (TG)n Simple_repeat Simple_repeat 2 55 0 7 696 1208 286 38 62 chr17 14575076 14575482 -80697169 - MTE2a LTR MaLR -16 403 19 7 696 189 0 0 0 chr17 14576020 14576041 -80696610 + (T)n Simple_repeat Simple_repeat 1 21 0 7 696 1236 240 77 40 chr17 14577768 14578119 -80694532 - MTEb LTR MaLR -4 375 12 7 696 218 105 26 0 chr17 14578962 14579000 -80693651 + (TCC)n Simple_repeat Simple_repeat 2 40 0 7 696 656 173 0 0 chr17 14579054 14579158 -80693493 - Lx5 LINE L1 -537 6513 6410 7 696 855 216 18 6 chr17 14579159 14579322 -80693329 + Lx5 LINE L1 6742 6906 -144 7 696 1074 234 57 0 chr17 14579328 14579555 -80693096 + Lx5 LINE L1 6511 6750 -300 7 696 291 54 0 0 chr17 14579804 14579841 -80692810 + (CA)n Simple_repeat Simple_repeat 1 37 0 8 696 377 330 66 18 chr17 14580241 14580469 -80692182 - L1ME3 LINE L1 -1 6161 5923 8 696 432 207 0 27 chr17 14580555 14580739 -80691912 + (CA)n Simple_repeat Simple_repeat 2 180 0 8 696 198 0 0 0 chr17 14580740 14580762 -80691889 + (GA)n Simple_repeat Simple_repeat 2 23 0 8 696 365 347 33 38 chr17 14581095 14581326 -80691325 - L1ME3 LINE L1 -733 5440 5211 8 696 607 308 66 48 chr17 14581575 14581954 -80690697 - L1ME3 LINE L1 -1435 4711 4326 8 696 263 242 109 43 chr17 14582019 14582157 -80690494 - L1MD LINE L1 -1954 4192 4046 8 696 1317 88 0 0 chr17 14582312 14582551 -80690100 + (CA)n Simple_repeat Simple_repeat 1 239 0 8 696 225 266 151 59 chr17 14582673 14582825 -80689826 - L1ME3 LINE L1 -2198 3948 3783 8 696 274 260 45 8 chr17 14582946 14583078 -80689573 + L1MB7 LINE L1 6023 6159 -25 8 696 621 293 90 26 chr17 14585669 14585935 -80686716 + B4A SINE B4 1 283 -9 8 696 354 297 110 0 chr17 14586290 14586408 -80686243 - B1F SINE Alu -13 136 6 8 696 1232 216 122 16 chr17 14587758 14588069 -80684582 - ORR1E LTR MaLR -7 352 9 8 696 479 357 82 69 chr17 14588659 14588971 -80683680 + MLT1F2 LTR MaLR 175 500 -60 9 696 825 244 34 29 chr17 14588971 14589178 -80683473 - B3 SINE B2 -6 210 3 9 696 479 357 82 69 chr17 14589178 14589241 -80683410 + MLT1F2 LTR MaLR 501 555 -5 9 696 301 420 6 6 chr17 14589457 14589634 -80683017 + (TGGG)n Simple_repeat Simple_repeat 4 180 0 9 696 491 307 6 28 chr17 14589607 14589788 -80682863 + (TGGA)n Simple_repeat Simple_repeat 3 179 0 9 696 270 95 0 0 chr17 14590590 14590632 -80682019 + (CAA)n Simple_repeat Simple_repeat 3 44 0 9 696 30 45 0 0 chr17 14590819 14590863 -80681788 + AT_rich Low_complexity Low_complexity 1 44 0 9 696 236 254 0 63 chr17 14590981 14591044 -80681607 + MTEb LTR MaLR 14 72 -307 9 696 494 210 93 112 chr17 14591836 14591997 -80680654 + MTEb LTR MaLR 213 379 0 9 696 582 280 5 60 chr17 14594183 14594384 -80678267 - B3A SINE B2 -8 190 1 9 696 972 134 0 0 chr17 14594963 14595120 -80677531 + (TTC)n Simple_repeat Simple_repeat 3 159 0 9 696 1042 62 0 0 chr17 14595121 14595249 -80677402 - B1_Mus2 SINE Alu -6 141 14 9 696 201 188 0 0 chr17 14595297 14595333 -80677318 + CT-rich Low_complexity Low_complexity 14 49 0 1 696 504 48 0 0 chr17 14595333 14595396 -80677255 + (CCCCCT)n Simple_repeat Simple_repeat 6 68 0 1 696 201 188 0 0 chr17 14595396 14595407 -80677244 + polypyrimidine Low_complexity Low_complexity 3 13 0 1 696 217 189 22 0 chr17 14595786 14595794 -80676857 + (TG)n Simple_repeat Simple_repeat 1 8 0 1 696 351 0 0 0 chr17 14595794 14595833 -80676818 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 696 217 189 22 0 chr17 14595833 14595847 -80676804 + (TG)n Simple_repeat Simple_repeat 1 14 0 1 696 351 0 0 0 chr17 14595847 14595886 -80676765 + (GA)n Simple_repeat Simple_repeat 1 39 0 1 696 617 186 10 0 chr17 14595886 14596134 -80676517 + (TG)n Simple_repeat Simple_repeat 1 250 0 1 696 443 312 119 18 chr17 14596250 14596469 -80676182 - B4A SINE B4 -50 242 2 1 696 216 97 0 0 chr17 14598861 14598892 -80673759 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 696 2813 112 5 0 chr17 14598917 14599329 -80673322 - L1_Mm LINE L1 -384 5499 5086 1 696 2300 26 0 19 chr17 14599329 14599600 -80673051 + L1_Mus1 LINE L1 6302 6567 0 1 696 891 99 0 0 chr17 14599615 14599736 -80672915 - B1_Mur3 SINE Alu -12 137 17 1 696 1209 35 0 20 chr17 14599957 14600105 -80672546 + B1_Mm SINE Alu 3 147 0 1 696 338 44 43 29 chr17 14600109 14600179 -80672472 + (CAAAAA)n Simple_repeat Simple_repeat 2 72 0 1 696 343 329 170 47 chr17 14600592 14601016 -80671635 + L1M5 LINE L1 4849 5324 -822 1 696 480 77 0 0 chr17 14601202 14601267 -80671384 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 696 274 290 54 46 chr17 14601494 14601624 -80671027 + L1M2 LINE L1 4706 4836 -1307 1 696 192 200 0 0 chr17 14601855 14601895 -80670756 + (CGTG)n Simple_repeat Simple_repeat 3 42 0 1 696 226 294 57 70 chr17 14602663 14602820 -80669831 - MTB LTR MaLR -46 354 200 1 696 348 127 0 0 chr17 14603979 14604034 -80668617 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 696 302 262 0 12 chr17 14604060 14604226 -80668425 + (TATG)n Simple_repeat Simple_repeat 4 167 0 1 696 384 309 0 0 chr17 14604233 14604369 -80668282 + (TG)n Simple_repeat Simple_repeat 1 136 0 1 696 196 267 17 0 chr17 14604391 14604511 -80668140 + (TG)n Simple_repeat Simple_repeat 1 122 0 1 696 393 321 103 5 chr17 14605820 14606014 -80666637 + Tigger5 DNA MER2_type 43 255 -2151 1 696 275 302 120 8 chr17 14606006 14606123 -80666528 + Tigger5 DNA MER2_type 2162 2291 -115 1 696 359 239 34 11 chr17 14607751 14607840 -80664811 - B2_Mm2 SINE B2 -104 91 1 1 696 468 0 0 0 chr17 14607846 14607898 -80664753 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 696 249 281 65 73 chr17 14608092 14608215 -80664436 - MLT2E LTR ERVL -264 364 243 1 696 189 0 0 0 chr17 14608951 14608972 -80663679 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 696 252 0 0 0 chr17 14609169 14609197 -80663454 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 696 780 297 152 11 chr17 14609826 14610194 -80662457 + MLT2B5 LTR ERVL 78 497 -220 1 696 311 329 176 53 chr17 14611404 14611706 -80660945 + MLT1B LTR MaLR 5 343 -47 1 696 344 247 99 0 chr17 14611726 14611807 -80660844 + B3 SINE B2 106 194 -22 1 696 279 0 0 0 chr17 14611807 14611838 -80660813 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 696 244 307 135 29 chr17 14611864 14611916 -80660735 + B4 SINE B4 26 88 -204 1 696 372 298 114 0 chr17 14611916 14612047 -80660604 + B1F1 SINE Alu 3 148 -1 1 696 305 253 115 0 chr17 14614239 14614326 -80658325 - B3A SINE B2 -100 98 2 1 696 2497 226 49 60 chr17 14614329 14615085 -80657566 - Lx9 LINE L1 -3 7641 6894 1 696 201 74 0 0 chr17 14615378 14615405 -80657246 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1 696 323 223 111 104 chr17 14615658 14615793 -80656858 - RMER15 LTR ERVL -16 559 424 1 696 21 36 0 0 chr17 14616149 14616177 -80656474 + AT_rich Low_complexity Low_complexity 1 28 0 1 696 387 351 9 31 chr17 14616699 14616928 -80655723 - L1M4 LINE L1 -1394 4752 4529 1 696 804 258 110 83 chr17 14617347 14617710 -80654941 - MTE2b LTR MaLR -4 375 3 1 696 634 294 73 59 chr17 14617719 14617779 -80654872 - L1M4 LINE L1 -2259 3887 3833 1 696 2350 181 87 14 chr17 14617779 14618271 -80654380 - RLTR11A LTR ERVK 0 528 1 1 696 634 294 73 59 chr17 14618271 14618716 -80653935 - L1M4 LINE L1 -2314 3832 3375 1 696 21 57 0 0 chr17 14619574 14619609 -80653042 + AT_rich Low_complexity Low_complexity 1 35 0 1 696 266 289 179 31 chr17 14619609 14620066 -80652585 + L1M5 LINE L1 2804 3328 -2818 1 696 1760 135 8 102 chr17 14620446 14620809 -80651842 + ORR1A4 LTR MaLR 1 329 0 1 696 204 211 0 0 chr17 14620981 14621019 -80651632 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 1 696 469 42 28 0 chr17 14621064 14621136 -80651515 + (TTG)n Simple_repeat Simple_repeat 2 75 0 1 696 715 83 4 3 chr17 14621136 14621242 -80651409 - B1_Mus1 SINE Alu -8 112 1 1 696 433 325 69 16 chr17 14621826 14622074 -80650577 - L1MA4A LINE L1 -376 5927 5671 1 696 239 276 0 75 chr17 14622140 14622234 -80650417 - L1MA4A LINE L1 -255 5592 5506 1 696 782 254 71 56 chr17 14623810 14624148 -80648503 - RLTR15 LTR ERVK -16 343 1 1 696 272 314 60 93 chr17 14624585 14624736 -80647915 - MLT1A0 LTR MaLR -195 170 25 1 696 1399 230 28 53 chr17 14625912 14626426 -80646225 - RLTR11A LTR ERVK 0 528 2 1 696 932 234 74 10 chr17 14627563 14627766 -80644885 + B3 SINE B2 1 216 0 1 696 3383 197 110 87 chr17 14628065 14629038 -80643613 - Lx7 LINE L1 -2 7694 6700 1 696 1091 232 60 47 chr17 14629037 14629275 -80643376 - Lx7 LINE L1 -7048 680 437 1 696 234 0 0 0 chr17 14629275 14629301 -80643350 + (TGGGGG)n Simple_repeat Simple_repeat 5 30 0 1 696 1091 232 60 47 chr17 14629301 14629442 -80643209 - Lx7 LINE L1 -7292 436 297 1 696 594 75 0 0 chr17 14629516 14629596 -80643055 + (TG)n Simple_repeat Simple_repeat 2 81 0 1 696 646 221 11 6 chr17 14632857 14633034 -80639617 + GA-rich Low_complexity Low_complexity 2 179 0 1 696 336 141 25 25 chr17 14633521 14633601 -80639050 + CT-rich Low_complexity Low_complexity 3 82 0 1 696 438 265 204 21 chr17 14633619 14633854 -80638797 + Lx8 LINE L1 7189 7466 -7 1 696 370 245 147 0 chr17 14635307 14635439 -80637212 + L1MA4 LINE L1 5707 5889 -411 1 696 363 23 0 0 chr17 14635447 14635491 -80637160 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 696 211 189 0 0 chr17 14635521 14635558 -80637093 + (CAA)n Simple_repeat Simple_repeat 2 38 0 1 696 804 149 42 14 chr17 14635856 14635999 -80636652 + B1_Mur3 SINE Alu 3 149 0 1 696 1327 62 10 25 chr17 14637011 14637210 -80635441 - L1_Mus4 LINE L1 0 6636 6441 1 696 4722 106 13 12 chr17 14637211 14637891 -80634760 + L1_Mus4 LINE L1 5708 6388 -248 1 696 839 241 80 5 chr17 14637891 14638079 -80634572 - ID_B1 SINE B4 -17 207 6 1 696 923 268 5 18 chr17 14638119 14638336 -80634315 + B3 SINE B2 1 214 -2 1 696 23 68 0 0 chr17 14638811 14638855 -80633796 + AT_rich Low_complexity Low_complexity 1 44 0 1 696 659 46 0 11 chr17 14638953 14639041 -80633610 + (GGAAA)n Simple_repeat Simple_repeat 3 89 0 1 696 1899 119 68 5 chr17 14639134 14639486 -80633165 - MTB_Mm LTR MaLR 0 400 1 1 696 531 0 0 0 chr17 14639533 14639592 -80633059 + (TAA)n Simple_repeat Simple_repeat 2 60 0 1 696 999 260 4 22 chr17 14639592 14639832 -80632819 - Lx7 LINE L1 -866 6778 6426 1 696 2091 88 12 70 chr17 14640202 14640533 -80632118 - ORR1A4 LTR MaLR 0 329 18 1 696 404 82 16 0 chr17 14641367 14641428 -80631223 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 696 189 0 0 0 chr17 14641890 14641911 -80630740 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 696 360 0 0 0 chr17 14641911 14641950 -80630701 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 696 374 228 0 137 chr17 14642816 14642933 -80629718 - ID_B1 SINE B4 0 224 124 1 696 291 114 0 0 chr17 14643252 14643296 -80629355 + (CAAG)n Simple_repeat Simple_repeat 1 44 0 1 696 1113 137 50 5 chr17 14644721 14644919 -80627732 - Lx2 LINE L1 -1 6996 6790 1 696 2365 83 3 9 chr17 14644921 14645250 -80627401 + Lx2 LINE L1 5661 5987 -1010 1 696 197 159 0 22 chr17 14646803 14646848 -80625803 + GA-rich Low_complexity Low_complexity 3 46 0 1 696 342 243 69 84 chr17 14646909 14647111 -80625540 + L1MC LINE L1 2155 2353 -3793 1 696 198 71 0 0 chr17 14648205 14648233 -80624418 + (CAGA)n Simple_repeat Simple_repeat 4 31 0 1 696 21 0 0 0 chr17 14648880 14648901 -80623750 + AT_rich Low_complexity Low_complexity 1 21 0 1 696 190 286 118 63 chr17 14649456 14649583 -80623068 + MIR SINE MIR 86 219 -43 1 696 1148 48 14 0 chr17 14650116 14650261 -80622390 + B1_Mus1 SINE Alu 1 147 -1 1 696 426 39 0 0 chr17 14650836 14650888 -80621763 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 696 311 378 137 23 chr17 14652079 14652518 -80620133 + Arthur1 DNA Tip100 72 560 -3387 1 696 653 167 0 8 chr17 14652803 14652930 -80619721 + GA-rich Low_complexity Low_complexity 2 127 0 1 696 190 225 0 24 chr17 14653114 14653155 -80619496 - L2 LINE L2 -542 2877 2838 1 696 432 0 0 0 chr17 14653767 14653815 -80618836 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 696 529 242 30 8 chr17 14653815 14653948 -80618703 - B1F SINE Alu -11 138 3 1 696 666 37 0 0 chr17 14655876 14655957 -80616694 + (CAAAA)n Simple_repeat Simple_repeat 2 82 0 1 696 202 200 35 35 chr17 14657401 14657458 -80615193 + (GGGTG)n Simple_repeat Simple_repeat 3 59 0 1 696 1266 90 0 0 chr17 14657972 14658150 -80614501 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 1 696 335 78 20 0 chr17 14658150 14658201 -80614450 + (TCCC)n Simple_repeat Simple_repeat 1 52 0 1 696 213 121 0 0 chr17 14658213 14658246 -80614405 + (T)n Simple_repeat Simple_repeat 1 33 0 1 696 2038 121 17 0 chr17 14659312 14659610 -80613041 - ORR1A2 LTR MaLR 0 327 25 1 696 2910 120 9 5 chr17 14660834 14661253 -80611398 - MTC LTR MaLR 0 421 1 1 696 212 367 0 12 chr17 14663025 14663105 -80609546 + PB1D10 SINE Alu 34 112 -5 1 696 234 91 0 0 chr17 14666249 14666282 -80606369 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 2 696 1135 277 50 9 chr17 14667225 14667567 -80605084 + ORR1E LTR MaLR 4 359 0 2 696 1288 202 122 25 chr17 14667903 14668263 -80604388 + MTD LTR MaLR 1 395 -24 2 696 825 107 0 53 chr17 14668558 14668810 -80603841 + (CA)n Simple_repeat Simple_repeat 1 238 0 2 696 180 77 0 0 chr17 14669629 14669655 -80602996 + (T)n Simple_repeat Simple_repeat 1 26 0 2 696 692 167 216 6 chr17 14670842 14671023 -80601628 + URR1B DNA MER1_type 6 224 -1 2 696 1962 171 32 13 chr17 14671161 14671540 -80601111 + ORR1B1 LTR MaLR 1 386 -8 2 696 182 319 0 55 chr17 14672068 14672141 -80600510 + L2c LINE L2 3266 3334 -53 2 696 6760 32 5 5 chr17 14673839 14674647 -80598004 - L1Md_F3 LINE L1 -1 6583 5776 2 696 225 0 0 0 chr17 14677298 14677323 -80595328 + (A)n Simple_repeat Simple_repeat 1 25 0 2 696 7920 66 11 34 chr17 14678373 14679497 -80593154 - MusHAL1 LINE L1 0 2712 1615 2 10 1044 243 50 77 chr17 14679868 14680247 -80592404 + MTEa LTR MaLR 6 374 -5 2 697 264 208 19 0 chr17 14680633 14680686 -80591965 + L1MD LINE L1 2644 2697 -3449 2 697 29 28 0 0 chr17 14680900 14680936 -80591715 + AT_rich Low_complexity Low_complexity 1 36 0 2 697 24 0 0 0 chr17 14681097 14681121 -80591530 + AT_rich Low_complexity Low_complexity 1 24 0 2 697 592 316 63 30 chr17 14681575 14682006 -80590645 + L1M5 LINE L1 4757 5201 -945 2 697 462 326 49 78 chr17 14682254 14682557 -80590094 + B4A SINE B4 2 292 0 2 697 25 0 0 0 chr17 14682732 14682757 -80589894 + AT_rich Low_complexity Low_complexity 1 25 0 2 697 318 244 21 49 chr17 14683604 14683746 -80588905 - L1_Mur3 LINE L1 -1540 4340 4203 2 697 519 17 0 0 chr17 14683746 14683806 -80588845 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 697 516 291 147 38 chr17 14683806 14683954 -80588697 - L1_Mur3 LINE L1 -2477 3666 3497 2 697 351 0 0 0 chr17 14683954 14683993 -80588658 + (TTA)n Simple_repeat Simple_repeat 1 39 0 2 697 516 291 194 22 chr17 14683993 14684198 -80588453 - L1_Mur3 LINE L1 -2647 3496 3192 2 697 1258 284 176 36 chr17 14684198 14685182 -80587469 - L1_Mur3 LINE L1 -2911 2969 1848 2 697 424 70 0 53 chr17 14685415 14685490 -80587161 + (TCTCCC)n Simple_repeat Simple_repeat 2 72 0 2 697 363 298 42 30 chr17 14685670 14685836 -80586815 - L1MA6 LINE L1 -307 5993 5826 2 697 382 283 151 7 chr17 14686162 14686308 -80586343 + B3A SINE B2 2 168 -30 2 697 252 59 0 0 chr17 14686312 14686346 -80586305 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 697 457 286 94 0 chr17 14686396 14686522 -80586129 + L1M3 LINE L1 4351 4486 -1654 2 697 369 0 0 0 chr17 14686522 14686563 -80586088 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 697 457 297 105 16 chr17 14686563 14686800 -80585851 + L1M3 LINE L1 4487 4749 -1394 2 697 487 229 12 0 chr17 14686802 14686972 -80585679 + (TG)n Simple_repeat Simple_repeat 1 172 0 2 697 579 260 168 31 chr17 14686991 14687217 -80585434 - B4A SINE B4 0 292 36 2 697 614 236 142 58 chr17 14687442 14687703 -80584948 - L1MB8 LINE L1 -2 6349 6067 2 697 216 0 0 0 chr17 14687786 14687810 -80584841 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 2 697 378 107 0 0 chr17 14687947 14688003 -80584648 + (TATATG)n Simple_repeat Simple_repeat 4 59 0 2 697 205 297 128 0 chr17 14688864 14688969 -80583682 + MIRb SINE MIR 28 147 -129 2 697 198 0 0 0 chr17 14688976 14688998 -80583653 + (A)n Simple_repeat Simple_repeat 1 22 0 2 697 299 285 88 75 chr17 14690043 14690401 -80582250 - L1MB8 LINE L1 -1215 5104 4738 2 697 229 239 70 52 chr17 14690508 14690623 -80582028 - L1MD LINE L1 -1798 4348 4232 2 697 4973 196 75 9 chr17 14690638 14692062 -80580589 + Lx5 LINE L1 5501 7050 0 2 697 445 308 147 44 chr17 14692080 14692309 -80580342 - L1MB8 LINE L1 -1938 4381 4147 2 697 189 0 0 0 chr17 14692309 14692330 -80580321 + (TC)n Simple_repeat Simple_repeat 2 22 0 2 697 445 308 147 44 chr17 14692330 14692741 -80579910 - L1MB8 LINE L1 -2173 4146 3676 2 697 698 240 128 167 chr17 14692747 14692922 -80579729 + MTD LTR MaLR 6 205 -214 2 697 918 188 0 0 chr17 14692922 14693071 -80579580 + B1_Mur3 SINE Alu 1 149 0 2 697 698 225 127 194 chr17 14693071 14693305 -80579346 + MTD LTR MaLR 206 391 -28 2 697 186 43 0 0 chr17 14693305 14693328 -80579323 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 2 697 266 242 54 195 chr17 14693328 14693348 -80579303 + MTD LTR MaLR 350 366 -13 2 697 253 286 174 30 chr17 14693401 14693671 -80578980 - L1MB8 LINE L1 -2694 3625 3317 2 697 403 272 31 16 chr17 14693678 14693805 -80578846 - B1F SINE Alu -1 148 20 2 697 310 301 82 66 chr17 14694509 14694897 -80577754 - L1MB8 LINE L1 -3993 2422 1953 2 697 4460 52 27 0 chr17 14695852 14696409 -80576242 - L1Md_F3 LINE L1 -1 6583 6012 2 697 244 340 29 48 chr17 14698896 14699001 -80573650 + PB1D10 SINE Alu 6 108 -9 2 697 319 250 82 18 chr17 14699032 14699142 -80573509 - PB1D10 SINE Alu 0 117 1 2 697 29168 129 47 5 chr17 14699157 14704642 -80568009 + L1_Mus4 LINE L1 366 6109 -527 2 697 2505 82 9 0 chr17 14704647 14704989 -80567662 + L1_Mus4 LINE L1 6294 6638 0 2 697 674 301 77 59 chr17 14705078 14705350 -80567301 + B4A SINE B4 1 277 -15 2 697 468 176 20 33 chr17 14705405 14705558 -80567093 + (CATA)n Simple_repeat Simple_repeat 4 154 0 2 697 302 329 75 75 chr17 14705642 14705816 -80566835 - B4A SINE B4 -118 174 1 2 697 265 327 118 11 chr17 14705977 14706249 -80566402 - L1MEf LINE L1 -4441 1759 1459 2 697 246 152 0 0 chr17 14706624 14706683 -80565968 + T-rich Low_complexity Low_complexity 1 59 0 2 697 528 342 13 0 chr17 14707667 14707825 -80564826 - ID_B1 SINE B4 -22 202 43 2 697 540 286 13 7 chr17 14708496 14708651 -80564000 + RSINE1 SINE B4 4 159 -6 2 697 407 152 0 12 chr17 14708655 14708735 -80563916 + CT-rich Low_complexity Low_complexity 3 81 0 2 697 371 242 71 0 chr17 14709108 14709207 -80563444 + B1F1 SINE Alu 37 142 -7 2 697 225 0 0 0 chr17 14709239 14709264 -80563387 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 697 220 316 0 26 chr17 14709374 14709491 -80563160 + (TG)n Simple_repeat Simple_repeat 2 115 0 2 697 288 0 0 0 chr17 14709601 14709633 -80563018 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 697 200 176 0 0 chr17 14709661 14709695 -80562956 + GA-rich Low_complexity Low_complexity 3 36 0 2 697 287 222 2 6 chr17 14709930 14710004 -80562647 - B3A SINE B2 -121 72 1 2 697 513 0 0 0 chr17 14710051 14710108 -80562543 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 697 1756 170 34 50 chr17 14711092 14711476 -80561175 - ORR1C1 LTR MaLR 0 378 1 2 697 477 76 0 0 chr17 14712013 14712079 -80560572 + (CA)n Simple_repeat Simple_repeat 2 67 0 2 697 673 235 39 0 chr17 14712332 14712485 -80560166 - MTC LTR MaLR -2 419 261 2 697 471 316 60 55 chr17 14712658 14712722 -80559929 + L1MCa LINE L1 875 940 -5568 2 697 1936 237 35 58 chr17 14712722 14713242 -80559409 + RLTR18B LTR ERVK 1 508 -4 2 697 471 316 60 55 chr17 14713242 14713542 -80559109 + L1MCa LINE L1 941 1241 -5267 2 697 324 64 0 0 chr17 14713631 14713678 -80558973 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 697 942 112 0 0 chr17 14714480 14714658 -80557993 + (TTC)n Simple_repeat Simple_repeat 3 180 0 2 697 398 335 5 81 chr17 14714708 14714733 -80557918 - B4A SINE B4 -1 291 271 2 697 435 52 0 0 chr17 14714733 14714791 -80557860 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 697 398 335 5 81 chr17 14714791 14714986 -80557665 - B4A SINE B4 -22 270 88 2 697 451 176 256 7 chr17 14716874 14717011 -80555640 + B3 SINE B2 1 171 -45 2 697 245 206 16 0 chr17 14717142 14717205 -80555446 + B3 SINE B2 153 216 0 2 697 38914 42 0 3 chr17 14717613 14724026 -80548625 - L1Md_T LINE L1 0 6585 93 2 697 516 32 0 0 chr17 14724203 14724265 -80548386 + (GA)n Simple_repeat Simple_repeat 1 62 0 2 697 28 0 0 0 chr17 14725831 14725859 -80546792 + AT_rich Low_complexity Low_complexity 1 28 0 2 697 326 23 23 0 chr17 14726671 14726714 -80545937 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 697 446 323 40 57 chr17 14726765 14726942 -80545709 - B4A SINE B4 -110 182 9 2 697 369 0 0 0 chr17 14727355 14727396 -80545255 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 697 259 280 165 29 chr17 14729185 14729288 -80543363 - B4 SINE B4 -174 118 2 2 697 635 229 34 20 chr17 14730722 14730869 -80541782 - B3 SINE B2 -67 149 1 2 697 23 54 0 0 chr17 14730885 14730922 -80541729 + AT_rich Low_complexity Low_complexity 1 37 0 2 697 223 154 0 0 chr17 14731092 14731131 -80541520 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 697 758 239 32 16 chr17 14732995 14733182 -80539469 - B2_Mm2 SINE B2 -5 190 1 2 697 23 54 0 0 chr17 14733937 14733974 -80538677 + AT_rich Low_complexity Low_complexity 1 37 0 2 697 22 0 0 0 chr17 14734628 14734650 -80538001 + AT_rich Low_complexity Low_complexity 1 22 0 2 697 590 117 0 10 chr17 14739607 14739711 -80532940 - Lx LINE L1 -4 6650 6548 2 697 1398 70 11 26 chr17 14739744 14739934 -80532717 + B2_Mm1t SINE B2 1 187 -6 2 697 679 291 39 20 chr17 14739953 14740284 -80532367 + L1MA5 LINE L1 5677 6010 -1634 2 697 7823 219 55 61 chr17 14740655 14743052 -80529599 - Lx7 LINE L1 -1477 6219 3852 2 697 180 0 0 0 chr17 14743052 14743072 -80529579 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2 697 7823 217 51 68 chr17 14743072 14743238 -80529413 - Lx7 LINE L1 -2029 3851 3686 2 697 258 81 0 0 chr17 14744027 14744064 -80528587 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 697 357 257 40 28 chr17 14744087 14744310 -80528341 + (CA)n Simple_repeat Simple_repeat 1 225 0 2 697 234 0 0 0 chr17 14745006 14745032 -80527619 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 697 215 174 22 0 chr17 14746780 14746826 -80525825 + (TTA)n Simple_repeat Simple_repeat 1 47 0 2 697 234 128 0 0 chr17 14747179 14747218 -80525433 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 697 224 188 45 45 chr17 14747301 14747390 -80525261 + (CA)n Simple_repeat Simple_repeat 2 90 0 2 697 258 116 0 0 chr17 14747517 14747560 -80525091 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 697 1262 94 61 0 chr17 14748546 14748726 -80523925 + B2_Mm2 SINE B2 4 194 -1 2 697 4564 163 71 7 chr17 14751124 14752008 -80520643 - Lx9 LINE L1 -7 7637 6697 2 697 1499 220 73 23 chr17 14752008 14752785 -80519866 - Lx9 LINE L1 -1135 6509 5544 2 697 430 373 58 18 chr17 14753477 14753753 -80518898 + MLT1E LTR MaLR 367 653 0 2 697 2236 297 64 67 chr17 14754082 14755276 -80517375 + Lx8 LINE L1 6249 7438 -35 2 697 25 31 0 0 chr17 14755283 14755315 -80517336 + AT_rich Low_complexity Low_complexity 1 32 0 2 697 654 241 0 0 chr17 14755330 14755496 -80517155 + (TA)n Simple_repeat Simple_repeat 2 167 0 2 697 405 0 0 0 chr17 14755756 14755801 -80516850 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 697 486 0 0 0 chr17 14755801 14755854 -80516797 + (GA)n Simple_repeat Simple_repeat 2 55 0 3 697 819 206 80 10 chr17 14756837 14757038 -80515613 + B3 SINE B2 2 216 0 3 697 1618 94 25 4 chr17 14757951 14758187 -80514464 - L1_Mus4 LINE L1 -6 6630 6390 3 697 1269 85 54 31 chr17 14758281 14758491 -80514160 + L1_Mus4 LINE L1 6184 6373 -263 3 697 296 242 53 68 chr17 14759594 14759727 -80512924 + Lx9 LINE L1 7387 7517 -127 3 697 576 231 0 0 chr17 14759728 14759884 -80512767 + (TA)n Simple_repeat Simple_repeat 1 156 0 3 697 198 0 0 0 chr17 14762117 14762139 -80510512 + (TG)n Simple_repeat Simple_repeat 2 23 0 3 697 608 82 144 29 chr17 14762755 14762901 -80509750 + B1_Mus2 SINE Alu 1 149 0 3 697 378 57 0 0 chr17 14762918 14762971 -80509680 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 697 439 213 3 95 chr17 14765287 14765587 -80507064 + (TTGTG)n Simple_repeat Simple_repeat 1 272 0 3 697 1199 142 5 0 chr17 14766355 14766552 -80506099 - Lx4A LINE L1 -1 7057 6860 3 697 7989 118 34 4 chr17 14766565 14767871 -80504780 + Lx4A LINE L1 5084 6427 -631 3 697 1863 115 27 57 chr17 14767871 14768203 -80504448 - RLTRETN_Mm LTR ERVK 0 322 1 3 697 7989 136 41 6 chr17 14768203 14768624 -80504027 + Lx4A LINE L1 6428 6876 -182 3 697 7827 55 7 8 chr17 14769562 14770531 -80502120 - L1_Mus1 LINE L1 0 6567 5600 3 697 29 0 0 0 chr17 14771139 14771168 -80501483 + AT_rich Low_complexity Low_complexity 1 29 0 3 697 975 155 6 0 chr17 14771281 14771455 -80501196 + Lx4A LINE L1 6883 7057 -1 3 697 270 0 0 0 chr17 14771630 14771660 -80500991 + (TA)n Simple_repeat Simple_repeat 1 30 0 3 697 283 337 45 10 chr17 14773682 14773880 -80498771 + L1MEf LINE L1 695 899 -5301 3 697 203 264 19 0 chr17 14774331 14774384 -80498267 + GA-rich Low_complexity Low_complexity 1 54 0 3 697 2048 145 33 6 chr17 14774462 14774823 -80497828 - ORR1B1 LTR MaLR -23 371 1 3 697 355 275 178 10 chr17 14775240 14775442 -80497209 + MLT1A LTR MaLR 1 236 -138 3 697 202 194 72 101 chr17 14779012 14779081 -80493570 + MIRm SINE MIR 47 113 -163 3 697 406 311 136 35 chr17 14779426 14779683 -80492968 - MLT1B LTR MaLR -38 352 70 3 697 777 156 0 0 chr17 14780325 14780492 -80492159 + GA-rich Low_complexity Low_complexity 2 168 0 3 697 567 88 44 0 chr17 14780495 14780586 -80492065 + (CAGA)n Simple_repeat Simple_repeat 2 96 0 3 697 314 280 179 31 chr17 14781530 14781725 -80490926 - Lx8 LINE L1 0 7473 7250 3 697 726 207 46 13 chr17 14781891 14782043 -80490608 - ID_B1 SINE B4 -66 158 2 3 697 26 0 0 0 chr17 14782461 14782487 -80490164 + AT_rich Low_complexity Low_complexity 1 26 0 3 697 4457 146 91 77 chr17 14782494 14783468 -80489183 + RMER12 LTR ERVK 1 988 -334 3 697 231 278 92 95 chr17 14783493 14783799 -80488852 + RLTR21 LTR ERVK 1097 1401 -171 3 697 636 265 153 4 chr17 14784241 14784495 -80488156 + B4A SINE B4 1 292 0 3 697 318 106 0 0 chr17 14784508 14784555 -80488096 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 697 441 0 0 0 chr17 14784555 14784603 -80488048 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 697 222 213 98 61 chr17 14786365 14786452 -80486199 + PB1D7 SINE Alu 21 120 0 3 697 360 0 0 0 chr17 14788841 14788881 -80483770 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 697 1130 300 52 22 chr17 14789837 14790202 -80482449 - MTEb LTR MaLR -2 377 2 3 697 25 31 0 0 chr17 14790873 14790905 -80481746 + AT_rich Low_complexity Low_complexity 1 32 0 3 697 386 36 0 35 chr17 14795135 14795192 -80477459 + (TTG)n Simple_repeat Simple_repeat 2 56 0 3 697 197 291 123 29 chr17 14795278 14795416 -80477235 + MIRc SINE MIR 112 262 -6 3 697 27 0 0 0 chr17 14796493 14796520 -80476131 + AT_rich Low_complexity Low_complexity 1 27 0 3 697 4856 64 0 30 chr17 14797166 14797809 -80474842 + L1Md_F2 LINE L1 5948 6571 -11 3 697 2069 150 42 11 chr17 14798622 14798979 -80473672 - Lx3C LINE L1 -2 6974 6607 3 697 1509 167 15 8 chr17 14798979 14799238 -80473413 - MTC LTR MaLR -159 262 2 3 697 28 91 0 0 chr17 14800964 14801041 -80471610 + AT_rich Low_complexity Low_complexity 1 77 0 3 697 201 116 44 104 chr17 14801419 14801554 -80471097 + (TATATG)n Simple_repeat Simple_repeat 2 128 0 3 697 249 167 0 0 chr17 14804609 14804645 -80468006 - B1F1 SINE Alu -41 108 73 3 697 187 306 7 7 chr17 14804717 14804855 -80467796 + (TAGA)n Simple_repeat Simple_repeat 2 139 0 3 697 200 143 0 23 chr17 14805188 14805231 -80467420 + CT-rich Low_complexity Low_complexity 5 46 0 3 697 943 133 6 11 chr17 14805400 14805575 -80467076 + (GGAA)n Simple_repeat Simple_repeat 3 176 0 3 697 196 367 12 12 chr17 14807299 14807379 -80465272 + MIR SINE MIR 19 98 -164 3 697 580 243 183 11 chr17 14809184 14809375 -80463276 - ID_B1 SINE B4 0 224 1 3 698 414 0 0 0 chr17 14811646 14811692 -80460959 + (TAA)n Simple_repeat Simple_repeat 2 47 0 3 698 362 329 52 7 chr17 14812549 14812702 -80459949 - MER2 DNA MER2_type 0 345 186 3 698 498 284 29 131 chr17 14812751 14813063 -80459588 + B4A SINE B4 11 290 -2 3 698 732 23 0 0 chr17 14814711 14814797 -80457854 + (CAGGG)n Simple_repeat Simple_repeat 3 88 0 3 698 351 0 0 0 chr17 14814836 14814875 -80457776 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 698 455 278 16 43 chr17 14814934 14815162 -80457489 + (TATG)n Simple_repeat Simple_repeat 1 221 0 3 698 186 171 0 0 chr17 14816241 14816282 -80456369 + CT-rich Low_complexity Low_complexity 1 41 0 3 698 427 258 16 39 chr17 14816319 14816448 -80456203 + MLT1A LTR MaLR 246 371 -3 3 698 759 123 0 0 chr17 14817083 14817205 -80455446 + (CA)n Simple_repeat Simple_repeat 1 122 0 3 698 411 38 0 0 chr17 14817246 14817299 -80455352 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 698 346 363 63 14 chr17 14825555 14825762 -80446889 - Tigger5 DNA MER2_type -2189 217 1 3 698 350 0 44 0 chr17 14825875 14825920 -80446731 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 3 698 211 320 21 0 chr17 14826198 14826295 -80446356 + (TATG)n Simple_repeat Simple_repeat 4 102 0 3 698 345 47 0 0 chr17 14826406 14826449 -80446202 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 698 360 0 0 0 chr17 14830143 14830183 -80442468 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 698 21 0 0 0 chr17 14832263 14832284 -80440367 + GC_rich Low_complexity Low_complexity 1 21 0 3 698 380 245 84 11 chr17 14832319 14832414 -80440237 + RSINE1 SINE B4 64 165 0 3 698 21 71 0 0 chr17 14832444 14832486 -80440165 + AT_rich Low_complexity Low_complexity 1 42 0 3 698 330 45 0 0 chr17 14832814 14832858 -80439793 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 698 669 58 0 0 chr17 14838128 14838214 -80434437 + (GA)n Simple_repeat Simple_repeat 1 86 0 3 698 23 0 0 0 chr17 14838701 14838724 -80433927 + AT_rich Low_complexity Low_complexity 1 23 0 3 698 492 226 0 0 chr17 14839391 14839515 -80433136 + (TG)n Simple_repeat Simple_repeat 1 124 0 3 698 868 35 9 0 chr17 14841406 14841520 -80431131 + L1_Mus2 LINE L1 6451 6565 -1 3 698 466 233 91 7 chr17 14841799 14841988 -80430663 - MLT2B4 LTR ERVL -307 208 1 3 698 936 153 7 0 chr17 14844257 14844401 -80428250 + B1_Mur2 SINE Alu 3 147 -2 3 698 865 171 0 11 chr17 14844912 14845089 -80427562 + GA-rich Low_complexity Low_complexity 3 177 0 3 698 198 0 0 0 chr17 14847239 14847261 -80425390 + (A)n Simple_repeat Simple_repeat 1 22 0 3 698 537 300 16 27 chr17 14849890 14850075 -80422576 + B4A SINE B4 52 234 -58 3 698 566 231 20 33 chr17 14850514 14850594 -80422057 - RLTR20C LTR ERVK -13 565 490 3 698 1098 100 0 0 chr17 14850594 14850916 -80421735 + (CA)n Simple_repeat Simple_repeat 1 322 0 3 698 566 231 20 33 chr17 14850916 14850984 -80421667 - RLTR20C LTR ERVK -89 489 420 3 698 1042 208 75 52 chr17 14850976 14851281 -80421370 - RLTR20C LTR ERVK -222 312 1 3 698 276 277 76 36 chr17 14851440 14851664 -80420987 + MTEa LTR MaLR 132 376 -3 3 698 1297 120 150 0 chr17 14853498 14853732 -80418919 - Lx LINE L1 0 6654 6386 3 698 10145 73 15 2 chr17 14853736 14855131 -80417520 + MusHAL1 LINE L1 866 2278 -434 3 698 758 65 235 13 chr17 14855134 14855278 -80417373 + L1_Mus1 LINE L1 6416 6582 0 3 698 392 138 0 91 chr17 14855258 14855346 -80417305 + MusHAL1 LINE L1 2264 2343 -369 3 698 805 308 75 15 chr17 14857059 14857739 -80414912 - L1ME1 LINE L1 -365 5968 5215 3 698 470 321 95 12 chr17 14857883 14858126 -80414525 + L1MCb LINE L1 187 449 -5596 3 698 302 254 39 23 chr17 14858598 14858727 -80413924 + L1MCb LINE L1 1034 1164 -4881 3 698 630 0 0 0 chr17 14858735 14858805 -80413846 + (GAAA)n Simple_repeat Simple_repeat 4 73 0 3 698 355 309 48 18 chr17 14858892 14859060 -80413591 + L1MCb LINE L1 1409 1581 -5170 3 698 915 308 21 48 chr17 14859565 14860002 -80412649 - L1M2 LINE L1 -1746 4397 3973 3 698 409 263 222 25 chr17 14860117 14860320 -80412331 - RMER15 LTR ERVL -58 517 275 3 698 406 289 54 54 chr17 14860489 14860767 -80411884 - L1M2 LINE L1 -3836 2307 2025 3 698 1133 261 87 9 chr17 14860736 14861186 -80411465 - L1ME1 LINE L1 -1637 4509 4015 3 698 1672 83 8 4 chr17 14861186 14861427 -80411224 - L1_Mus3 LINE L1 0 6638 6397 3 698 1362 139 25 17 chr17 14861434 14861675 -80410976 + Lx2B LINE L1 6758 7000 0 3 698 1133 261 87 9 chr17 14861675 14861768 -80410883 - L1ME1 LINE L1 -2139 4007 3915 3 698 457 204 152 0 chr17 14861769 14861922 -80410729 - MTEb LTR MaLR 0 379 201 3 698 369 290 78 18 chr17 14862214 14862345 -80410306 - L1ME1 LINE L1 -2391 3755 3617 3 698 210 71 0 0 chr17 14862345 14862373 -80410278 + (TTG)n Simple_repeat Simple_repeat 2 29 0 3 698 369 289 137 15 chr17 14862373 14862493 -80410158 - L1ME1 LINE L1 -2526 3620 3481 3 698 2131 207 95 8 chr17 14862528 14863021 -80409630 + Lx9 LINE L1 7109 7644 0 3 698 280 293 0 0 chr17 14863974 14864056 -80408595 - L1M2 LINE L1 -544 5756 5675 3 698 757 250 26 15 chr17 14864070 14864334 -80408317 - L1M2 LINE L1 -703 5597 5331 3 698 247 322 69 9 chr17 14865124 14865297 -80407354 - L1M5 LINE L1 -724 5720 5539 3 698 389 331 93 19 chr17 14865460 14865826 -80406825 - L1ME1 LINE L1 -5447 795 403 3 698 305 136 17 0 chr17 14866057 14866105 -80406546 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 698 531 0 0 0 chr17 14866105 14866164 -80406487 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 698 305 136 17 0 chr17 14866164 14866174 -80406477 + (TA)n Simple_repeat Simple_repeat 2 11 0 3 698 297 0 0 0 chr17 14866322 14866355 -80406296 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 698 975 126 0 0 chr17 14866355 14866513 -80406138 + (TC)n Simple_repeat Simple_repeat 2 160 0 4 698 381 43 0 0 chr17 14866723 14866770 -80405881 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 698 30 0 0 0 chr17 14866872 14866902 -80405749 + AT_rich Low_complexity Low_complexity 1 30 0 4 698 293 0 0 26 chr17 14866978 14867016 -80405635 + (TAA)n Simple_repeat Simple_repeat 1 37 0 4 698 656 273 72 0 chr17 14867077 14867271 -80405380 - B3 SINE B2 -4 212 5 4 698 393 288 21 28 chr17 14867443 14867586 -80405065 + ORR1E LTR MaLR 18 159 -200 4 698 2467 325 67 58 chr17 14867793 14868973 -80403678 + MTE-int LTR MaLR 1 1191 -389 4 698 1005 208 178 21 chr17 14868973 14869334 -80403317 + RLTR11B LTR ERVK 1 431 -10 4 698 802 306 37 63 chr17 14869373 14869756 -80402895 + MTE-int LTR MaLR 1174 1546 -34 4 698 572 301 56 45 chr17 14869989 14870298 -80402353 + MTD LTR MaLR 95 398 -21 4 698 866 225 43 0 chr17 14870501 14870688 -80401963 - B3A SINE B2 -3 195 1 4 698 300 111 0 0 chr17 14871698 14871743 -80400908 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 698 488 299 6 11 chr17 14871866 14872042 -80400609 + (TG)n Simple_repeat Simple_repeat 2 176 0 4 698 221 57 0 28 chr17 14872067 14872103 -80400548 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 698 250 314 167 0 chr17 14873601 14873703 -80398948 - MER34B-int LTR ERV1 -813 4543 4425 4 698 313 263 60 17 chr17 14873903 14874019 -80398632 - MER34B-int LTR ERV1 -2281 3075 2955 4 698 267 31 0 0 chr17 14874308 14874340 -80398311 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 698 3073 220 35 21 chr17 14875896 14876270 -80396381 + RMER1C Other Other 685 1039 -303 4 698 1157 68 0 7 chr17 14876270 14876418 -80396233 - B1_Mm SINE Alu 0 147 1 4 698 3073 214 37 20 chr17 14876418 14876714 -80395937 + RMER1C Other Other 1040 1342 0 4 698 3446 35 2 0 chr17 14877252 14877647 -80395004 - MTA_Mm LTR MaLR 0 396 1 4 698 831 273 54 32 chr17 14878929 14879209 -80393442 - B4A SINE B4 -6 286 1 4 698 314 275 71 55 chr17 14879234 14879361 -80393290 - MER110-int LTR ERV1 -2342 2305 2177 4 698 1106 288 69 53 chr17 14880152 14880644 -80392007 - RMER5 LTR ERV1 -2 532 33 4 698 918 152 36 6 chr17 14881497 14881663 -80390988 + URR1B DNA MER1_type 55 225 0 4 698 256 284 86 60 chr17 14881663 14881779 -80390872 - MLT-int LTR MaLR -1600 135 17 4 698 246 222 0 0 chr17 14881849 14881894 -80390757 - MLT1A0 LTR MaLR -100 265 221 4 698 639 271 105 49 chr17 14884102 14884556 -80388095 + L1MB4 LINE L1 5659 6148 -26 4 698 931 325 40 10 chr17 14884558 14884962 -80387689 + L1MA4A LINE L1 5516 5931 -372 4 698 216 0 0 0 chr17 14887870 14887894 -80384757 + (A)n Simple_repeat Simple_repeat 1 24 0 4 698 342 0 0 0 chr17 14888140 14888178 -80384473 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 698 310 339 26 32 chr17 14889632 14889821 -80382830 - Tigger5 DNA MER2_type -56 2350 2163 4 698 1312 170 9 5 chr17 14891794 14892018 -80380633 - URR1B DNA MER1_type 0 225 1 4 698 254 273 0 0 chr17 14893023 14893089 -80379562 + (TG)n Simple_repeat Simple_repeat 1 66 0 4 698 319 257 12 0 chr17 14893105 14893276 -80379375 + (TG)n Simple_repeat Simple_repeat 2 174 0 4 698 5384 61 19 16 chr17 14893812 14894512 -80378139 + L1_Mus2 LINE L1 5864 6565 -1 4 698 183 100 0 0 chr17 14894534 14894564 -80378087 + (A)n Simple_repeat Simple_repeat 1 30 0 4 698 38743 30 0 0 chr17 14894772 14900922 -80371729 - L1Md_T LINE L1 0 6585 338 4 698 25 0 0 0 chr17 14901307 14901332 -80371319 + AT_rich Low_complexity Low_complexity 1 25 0 4 698 2490 90 9 0 chr17 14902434 14902757 -80369894 + ORR1A3 LTR MaLR 1 326 0 4 698 2159 129 3 9 chr17 14905940 14906268 -80366383 + ORR1A3 LTR MaLR 1 326 0 4 698 587 270 129 5 chr17 14906271 14906643 -80366008 + L1M2 LINE L1 3065 3482 -2661 4 698 538 279 66 18 chr17 14906680 14906954 -80365697 + L1M2 LINE L1 4929 5215 -925 4 698 604 284 117 10 chr17 14908916 14909112 -80363539 + ID_B1 SINE B4 1 217 -7 4 698 1140 160 46 23 chr17 14909455 14909673 -80362978 + URR1B DNA MER1_type 3 225 0 4 698 1339 226 56 45 chr17 14910412 14910787 -80361864 - MTE2b LTR MaLR 0 379 1 4 698 225 196 0 0 chr17 14910797 14910843 -80361808 - MTE2b-int LTR MaLR -9 1249 1204 4 698 337 246 8 73 chr17 14910843 14910966 -80361685 - MTE2a-int LTR MaLR -122 1458 1344 4 698 769 237 77 4 chr17 14910972 14911220 -80361431 - Lx9 LINE L1 -1692 5952 5656 4 698 575 92 11 0 chr17 14911246 14911333 -80361318 + (GA)n Simple_repeat Simple_repeat 2 89 0 4 698 540 215 322 0 chr17 14911333 14911482 -80361169 - MT2A LTR ERVL -92 441 245 4 698 328 239 185 0 chr17 14911488 14911580 -80361071 - MT2A LTR ERVL -422 111 3 4 698 1009 243 162 29 chr17 14911585 14911962 -80360689 - Lx9 LINE L1 -189 5658 5232 4 698 381 326 53 0 chr17 14911971 14912143 -80360508 + Lx9 LINE L1 7049 7363 -281 4 698 557 351 109 0 chr17 14912396 14912676 -80359975 - MTE2a-int LTR MaLR -217 1363 1053 4 698 1659 156 80 12 chr17 14912676 14913013 -80359638 - ORR1B2 LTR MaLR 0 367 8 4 698 2855 264 91 59 chr17 14913017 14913541 -80359110 - MTE2a-int LTR MaLR -523 1057 474 4 698 1823 200 193 35 chr17 14913541 14914060 -80358591 - MT2B LTR ERVL 0 601 1 4 698 2855 264 91 59 chr17 14914060 14914559 -80358092 - MTE2a-int LTR MaLR -1107 473 1 4 698 1056 224 64 88 chr17 14914563 14914905 -80357746 - MTE2a LTR MaLR -4 375 42 4 698 318 353 68 24 chr17 14915438 14915807 -80356844 - L1M5 LINE L1 -520 5644 5260 4 698 1290 170 9 4 chr17 14915962 14916187 -80356464 + URR1A DNA MER1_type 1 226 0 4 698 216 0 0 0 chr17 14916730 14916754 -80355897 + (T)n Simple_repeat Simple_repeat 1 24 0 4 698 273 309 10 21 chr17 14917703 14917799 -80354852 + GA-rich Low_complexity Low_complexity 3 97 0 4 698 546 272 148 52 chr17 14917799 14918070 -80354581 - MLT2D LTR ERVL -62 352 56 4 698 444 134 0 0 chr17 14919303 14919400 -80353251 + (TCTG)n Simple_repeat Simple_repeat 4 100 0 4 698 342 0 0 0 chr17 14919400 14919438 -80353213 + (GA)n Simple_repeat Simple_repeat 1 38 0 4 698 1786 169 218 49 chr17 14919829 14920378 -80352273 + RLTR26 LTR ERVK 1 642 0 4 698 681 161 98 63 chr17 14921513 14921718 -80350933 - Lx2B LINE L1 -1 6999 6788 4 698 396 0 0 0 chr17 14921918 14921962 -80350689 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 698 239 306 64 18 chr17 14922076 14922186 -80350465 - HAL1 LINE L1 -1433 1074 960 4 698 184 343 0 15 chr17 14922976 14923044 -80349607 + MIR SINE MIR 30 96 -112 4 698 186 43 0 0 chr17 14923535 14923558 -80349093 + (CAGAG)n Simple_repeat Simple_repeat 5 27 0 4 698 5221 137 10 5 chr17 14923750 14924556 -80348095 + Lx LINE L1 5845 6654 0 4 698 636 130 0 10 chr17 14924578 14924679 -80347972 - MTC LTR MaLR -321 100 1 4 698 741 290 132 19 chr17 14925174 14925606 -80347045 + RMER5 LTR ERV1 44 524 -10 4 698 2987 206 81 14 chr17 14926826 14927628 -80345023 - RCHARR1 DNA MER1_type -1 973 118 4 698 430 261 0 12 chr17 14927797 14927964 -80344687 + (TG)n Simple_repeat Simple_repeat 1 165 0 4 698 198 224 0 0 chr17 14928043 14928092 -80344559 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 698 2375 72 125 3 chr17 14928181 14928377 -80344274 + BGLII LTR ERVK 1 224 -197 4 698 186 43 0 0 chr17 14928377 14928400 -80344251 + (GGA)n Simple_repeat Simple_repeat 2 24 0 4 698 2375 72 125 3 chr17 14928400 14928578 -80344073 + BGLII LTR ERVK 225 419 -2 4 698 682 280 64 15 chr17 14928578 14928781 -80343870 - B4A SINE B4 -51 241 29 4 698 3520 238 70 55 chr17 14928796 14929878 -80342773 - RLTR25A LTR ERVK 0 1103 5 4 698 657 69 0 0 chr17 14930205 14930292 -80342359 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 4 698 180 77 0 0 chr17 14930453 14930479 -80342172 + (T)n Simple_repeat Simple_repeat 1 26 0 4 698 981 304 57 52 chr17 14930506 14930874 -80341777 - MTE2b LTR MaLR -9 370 1 4 698 252 0 0 0 chr17 14932830 14932858 -80339793 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 698 672 229 140 0 chr17 14933302 14933481 -80339170 - ID_B1 SINE B4 -19 205 2 4 698 276 30 0 0 chr17 14933564 14933597 -80339054 + (TC)n Simple_repeat Simple_repeat 1 33 0 4 698 363 342 60 86 chr17 14934261 14934562 -80338089 + ORR1E LTR MaLR 1 293 -66 4 698 3796 146 42 7 chr17 14934578 14934721 -80337930 - RMER6D LTR ERVK -11 709 564 4 698 4647 99 6 15 chr17 14934721 14935406 -80337245 - L1_Mus3 LINE L1 -2 6636 5958 4 698 3796 146 42 7 chr17 14935406 14935947 -80336704 - RMER6D LTR ERVK -157 563 1 4 698 1235 298 100 17 chr17 14936030 14936549 -80336102 + ORR1E-int LTR MaLR 31 592 -988 4 698 1069 190 31 129 chr17 14936550 14936907 -80335744 + RLTRETN_Mm LTR ERVK 1 322 0 4 698 230 51 0 49 chr17 14936918 14936959 -80335692 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 698 1170 51 0 0 chr17 14936959 14937096 -80335555 - B1_Mm SINE Alu -9 138 2 4 698 3311 81 2 2 chr17 14937096 14937531 -80335120 + MMETn-int LTR ERVK 2659 3093 -1751 4 87 38921 41 0 3 chr17 14937552 14943832 -80328819 - L1Md_T LINE L1 0 6585 224 4 699 315 83 0 0 chr17 14943832 14943880 -80328771 + MMETn-int LTR ERVK 3094 3141 -1703 4 699 6873 129 14 13 chr17 14943986 14944962 -80327689 + ETnERV2-int LTR ERVK 6227 7203 -203 4 699 301 231 334 51 chr17 14944964 14945256 -80327395 + RLTR13B1 LTR ERVK 155 531 -371 4 699 412 150 23 70 chr17 14945256 14945342 -80327309 + ETnERV2-int LTR ERVK 7324 7405 -1 4 699 999 203 31 129 chr17 14945342 14945699 -80326952 + RLTRETN_Mm LTR ERVK 1 322 0 4 699 222 329 13 0 chr17 14945699 14945775 -80326876 + RSINE1 SINE B4 47 123 -42 4 699 255 61 0 0 chr17 14945824 14945857 -80326794 + (GA)n Simple_repeat Simple_repeat 1 33 0 4 699 1972 295 95 63 chr17 14945863 14946763 -80325888 + ORR1E-int LTR MaLR 600 1529 -51 4 699 278 291 201 6 chr17 14946763 14946922 -80325729 + ORR1E LTR MaLR 3 192 -167 4 699 1870 199 50 15 chr17 14947865 14948262 -80324389 + MTD LTR MaLR 5 415 -4 4 699 22 0 0 0 chr17 14948481 14948503 -80324148 + AT_rich Low_complexity Low_complexity 1 22 0 4 699 404 324 0 0 chr17 14950846 14950957 -80321694 + PB1D7 SINE Alu 1 111 -9 4 699 225 0 0 0 chr17 14950971 14950996 -80321655 + (CAAT)n Simple_repeat Simple_repeat 3 27 0 4 699 265 184 107 73 chr17 14951099 14951210 -80321441 - L1MB7 LINE L1 -214 5964 5855 4 699 207 0 0 0 chr17 14952348 14952371 -80320280 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 699 324 0 0 0 chr17 14954092 14954128 -80318523 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 699 2147 121 39 17 chr17 14955086 14955446 -80317205 + RLTR9A LTR ERVK 1 368 0 4 699 317 268 44 18 chr17 14955449 14955563 -80317088 - MMAR1 DNA Mariner -1169 117 1 4 699 1811 195 97 3 chr17 14955626 14956007 -80316644 - MTD LTR MaLR 0 419 3 4 699 222 171 0 0 chr17 14956260 14956301 -80316350 + CT-rich Low_complexity Low_complexity 3 43 0 4 699 199 133 0 43 chr17 14956302 14956349 -80316302 + (CCA)n Simple_repeat Simple_repeat 3 47 0 5 699 3360 184 122 14 chr17 14956353 14957066 -80315585 - Lx9 LINE L1 -520 7124 6335 5 699 734 191 90 28 chr17 14957074 14957252 -80315399 + L1_Rod LINE L1 4681 4869 -978 5 699 778 161 261 0 chr17 14957251 14957350 -80315301 + Lx9 LINE L1 7369 7476 -168 5 699 468 0 0 0 chr17 14957350 14957402 -80315249 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 699 778 161 261 0 chr17 14957402 14957520 -80315131 + Lx9 LINE L1 7477 7642 -2 5 699 402 303 9 0 chr17 14958412 14958629 -80314022 + (CA)n Simple_repeat Simple_repeat 1 219 0 5 699 292 312 19 31 chr17 14959125 14959287 -80313364 - MLT1A1 LTR MaLR -247 161 2 5 699 1539 177 39 115 chr17 14960600 14960927 -80311724 + ORR1C2 LTR MaLR 1 324 -60 5 699 1448 68 15 30 chr17 14960927 14961125 -80311526 + B2_Mm2 SINE B2 1 195 0 5 699 1539 177 39 115 chr17 14961125 14961144 -80311507 + ORR1C2 LTR MaLR 325 326 -58 5 699 613 203 17 8 chr17 14961144 14961263 -80311388 + PB1D9 SINE Alu 1 120 0 5 699 1539 177 39 115 chr17 14961263 14961331 -80311320 + ORR1C2 LTR MaLR 327 384 0 5 699 264 149 0 0 chr17 14962515 14962562 -80310089 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 699 1803 201 67 8 chr17 14964110 14964486 -80308165 - MTC LTR MaLR -1 420 23 5 699 198 0 0 0 chr17 14965035 14965057 -80307594 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 5 699 301 339 132 0 chr17 14966868 14967095 -80305556 + L1M4c LINE L1 1710 1966 -4884 5 699 803 277 86 48 chr17 14967106 14967396 -80305255 + L1M4c LINE L1 2058 2628 -4221 5 699 846 225 68 5 chr17 14967396 14967588 -80305063 - B3 SINE B2 -12 204 1 5 699 803 274 88 50 chr17 14967588 14967785 -80304866 + L1M4c LINE L1 2332 2540 -4310 5 699 217 273 15 15 chr17 14967787 14967854 -80304797 + RSINE1 SINE B4 4 70 -95 5 699 907 113 0 0 chr17 14967855 14967988 -80304663 + L1_Mm LINE L1 5285 5417 -466 5 699 15524 209 70 37 chr17 14968052 14972512 -80300139 - Lx9 LINE L1 -1592 6052 1413 5 699 14979 72 13 5 chr17 14973127 14976018 -80296633 + L1VL2 LINE L1 76 2989 -626 5 699 7968 39 2 1 chr17 14976194 14977148 -80295503 - L1Md_F2 LINE L1 -1 6581 5654 5 699 22 0 0 0 chr17 14977357 14977379 -80295272 + AT_rich Low_complexity Low_complexity 1 22 0 5 699 26 50 0 0 chr17 14978408 14978448 -80294203 + AT_rich Low_complexity Low_complexity 1 40 0 5 699 261 0 0 0 chr17 14978503 14978532 -80294119 + (TAGA)n Simple_repeat Simple_repeat 3 31 0 5 699 368 191 12 0 chr17 14978540 14978624 -80294027 + GA-rich Low_complexity Low_complexity 6 90 0 5 699 998 269 16 45 chr17 14980047 14980358 -80292293 + Lx8 LINE L1 7080 7381 -92 5 699 3268 220 70 35 chr17 14981324 14982124 -80290527 + Lx9 LINE L1 6636 7463 -181 5 699 549 288 131 45 chr17 14982132 14982399 -80290252 + L1M4 LINE L1 3828 4100 -2046 5 699 2868 15 49 0 chr17 14982399 14982727 -80289924 - L1Md_F2 LINE L1 -12 6570 6227 5 699 330 289 143 48 chr17 14982727 14982966 -80289685 + L1M4 LINE L1 4101 4374 -1772 5 699 205 204 0 20 chr17 14983139 14983189 -80289462 + CT-rich Low_complexity Low_complexity 1 49 0 5 699 1612 42 0 0 chr17 14984624 14984813 -80287838 + B2_Mm1t SINE B2 1 189 -4 5 699 483 257 140 37 chr17 14985485 14985942 -80286709 + Zaphod DNA Tip100 540 1043 -2988 5 699 1466 172 50 9 chr17 14987055 14987370 -80285281 + MTC LTR MaLR 8 421 0 5 699 261 246 0 0 chr17 14987453 14987587 -80285064 + (TG)n Simple_repeat Simple_repeat 2 135 0 5 699 546 202 0 0 chr17 14987614 14987777 -80284874 + (TG)n Simple_repeat Simple_repeat 2 164 0 5 699 958 276 77 50 chr17 14987801 14988320 -80284331 - L1M4 LINE L1 -2019 4127 3581 5 699 2613 162 53 34 chr17 14988425 14988955 -80283696 + RLTR20A LTR ERVK 2 541 0 5 699 24 0 0 0 chr17 14988962 14988986 -80283665 + AT_rich Low_complexity Low_complexity 1 24 0 5 699 4982 88 36 16 chr17 14989038 14989810 -80282841 - RLTR13D1 LTR ERVK -18 788 1 5 699 307 226 98 61 chr17 14989819 14989951 -80282700 - L1M4 LINE L1 -2758 3388 3252 5 699 21 0 0 0 chr17 14990106 14990127 -80282524 + AT_rich Low_complexity Low_complexity 1 21 0 5 699 352 351 42 0 chr17 14991754 14991919 -80280732 - LTR80A LTR ERVL -258 325 154 5 699 2778 151 58 40 chr17 14992263 14992889 -80279762 + L1_Mur3 LINE L1 2044 2680 -3200 5 699 1382 219 57 3 chr17 14992886 14993184 -80279467 - Lx7 LINE L1 -1219 6477 6164 5 699 209 227 0 0 chr17 14993550 14993594 -80279057 + A-rich Low_complexity Low_complexity 1 44 0 5 699 1171 121 135 10 chr17 14993795 14993995 -80278656 - URR1A DNA MER1_type 0 226 2 5 699 249 278 22 11 chr17 14995057 14995148 -80277503 - Tigger7 DNA MER2_type -8 2483 2392 5 699 679 292 99 29 chr17 14995131 14995679 -80276972 - Tigger7 DNA MER2_type -1884 607 1 5 699 957 289 206 42 chr17 14997056 14998520 -80274131 + L1MCa LINE L1 96 1830 -4678 5 699 198 0 0 0 chr17 14998553 14998575 -80274076 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 5 699 2260 91 50 21 chr17 14999226 14999607 -80273044 - MTB LTR MaLR -8 392 1 5 699 337 173 84 24 chr17 14999638 14999713 -80272938 + L1MCa LINE L1 2137 2217 -4291 5 699 243 0 0 0 chr17 14999713 14999740 -80272911 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 5 699 401 312 64 5 chr17 14999770 14999957 -80272694 + L1MCa LINE L1 2377 2574 -3747 5 699 2968 265 120 43 chr17 15000000 15000699 -80271952 + L1MC LINE L1 2480 3240 -2906 1 699 1153 82 0 0 chr17 15000699 15000846 -80271805 + B1_Mm SINE Alu 1 147 0 2 699 2968 265 120 43 chr17 15000846 15001716 -80270935 + L1MC LINE L1 3241 4170 -1976 1 699 2106 102 3 85 chr17 15001806 15002171 -80270480 + IAPLTR1a_Mm LTR ERVK 1 335 -2 3 699 24574 8 6 23 chr17 15002171 15004961 -80267690 + IAPEz-int LTR ERVK 9 2751 -3730 3 699 29288 16 4 0 chr17 15004953 15008178 -80264473 + IAPEz-int LTR ERVK 3244 6481 0 3 699 1904 106 3 86 chr17 15008178 15008540 -80264111 + IAPLTR1a_Mm LTR ERVK 1 332 -5 3 699 287 346 7 51 chr17 15008540 15008677 -80263974 + MLT1E1A LTR MaLR 401 531 -149 4 699 1817 201 42 20 chr17 15008943 15009344 -80263307 - MTD LTR MaLR 0 419 10 5 699 23 0 0 0 chr17 15009447 15009470 -80263181 + AT_rich Low_complexity Low_complexity 1 23 0 6 699 399 293 114 23 chr17 15009710 15009993 -80262658 + L1M5 LINE L1 4999 5298 -848 7 699 260 312 109 0 chr17 15010044 15010182 -80262469 + L1M5 LINE L1 5417 5569 -593 7 699 342 0 0 0 chr17 15010455 15010493 -80262158 + (CTG)n Simple_repeat Simple_repeat 2 39 0 8 699 1130 62 0 20 chr17 15010575 15010724 -80261927 + B1_Mus1 SINE Alu 3 148 0 9 699 213 154 0 0 chr17 15010728 15010767 -80261884 + A-rich Low_complexity Low_complexity 1 39 0 1 699 386 151 0 14 chr17 15010869 15010943 -80261708 + (TA)n Simple_repeat Simple_repeat 1 73 0 1 699 234 0 0 0 chr17 15011140 15011166 -80261485 + (A)n Simple_repeat Simple_repeat 1 26 0 1 699 453 303 40 8 chr17 15011170 15011394 -80261257 + Lx8 LINE L1 7096 7313 -383 1 699 387 257 127 9 chr17 15012579 15012689 -80259962 - ID_B1 SINE B4 -6 218 96 1 699 913 267 97 36 chr17 15013875 15014205 -80258446 - ORR1E LTR MaLR -4 355 6 1 699 507 254 100 87 chr17 15014660 15014914 -80257737 - L1M3 LINE L1 -570 5730 5474 1 699 459 307 87 97 chr17 15014918 15015113 -80257538 - B3A SINE B2 -5 193 1 1 699 260 258 141 8 chr17 15015179 15015300 -80257351 - L1M3 LINE L1 -827 5464 5328 1 699 1290 90 79 0 chr17 15015772 15015949 -80256702 - B2_Mm2 SINE B2 -3 192 2 1 699 386 336 37 29 chr17 15016851 15017093 -80255558 - L1M5 LINE L1 -2197 3949 3706 1 699 222 224 241 0 chr17 15017526 15017584 -80255067 + PB1D10 SINE Alu 40 111 -6 2 699 1270 76 48 21 chr17 15017819 15018007 -80254644 + B2_Mm1t SINE B2 1 193 0 2 699 883 114 27 7 chr17 15018206 15018356 -80254295 - URR1A DNA MER1_type -3 223 71 2 699 227 246 66 0 chr17 15020001 15020062 -80252589 - ID4 SINE ID -10 73 9 2 699 22 70 0 0 chr17 15020114 15020157 -80252494 + AT_rich Low_complexity Low_complexity 1 43 0 2 699 433 317 0 27 chr17 15020787 15020936 -80251715 - RSINE1 SINE B4 -18 147 3 2 699 486 311 79 70 chr17 15021971 15022199 -80250452 + MTD LTR MaLR 32 261 -158 2 699 261 185 0 18 chr17 15022200 15022255 -80250396 - ERVL-E-int LTR ERVL -1220 4447 4394 2 699 426 186 98 23 chr17 15022261 15022402 -80250249 + MTD LTR MaLR 260 401 -18 2 699 21 36 0 0 chr17 15022496 15022524 -80250127 + AT_rich Low_complexity Low_complexity 1 28 0 2 699 3430 246 126 39 chr17 15025134 15026185 -80246466 - Lx8 LINE L1 -65 7408 6267 2 699 333 319 120 41 chr17 15026284 15026526 -80246125 + B4 SINE B4 8 268 -24 3 699 2956 113 6 13 chr17 15026547 15027021 -80245630 - RLTR31B_Mm LTR ERVK -86 471 1 3 699 1402 246 61 39 chr17 15027143 15027550 -80245101 + MTD LTR MaLR 3 418 -1 3 699 3763 2 0 0 chr17 15027825 15028234 -80244417 + L1Md_A LINE L1 6174 6582 0 3 699 577 202 119 17 chr17 15028246 15028422 -80244229 + B3A SINE B2 3 196 -2 3 699 32570 103 19 5 chr17 15029676 15035710 -80236941 + L1_Mus1 LINE L1 443 6567 0 3 699 914 138 243 0 chr17 15036416 15036597 -80236054 - URR1B DNA MER1_type 0 225 1 3 699 381 259 19 0 chr17 15037081 15037239 -80235412 + (GGATG)n Simple_repeat Simple_repeat 2 162 0 3 699 3953 63 30 0 chr17 15037734 15038238 -80234413 + L1_Mus1 LINE L1 6048 6566 -1 3 699 198 91 0 0 chr17 15038600 15038633 -80234018 + (T)n Simple_repeat Simple_repeat 1 33 0 3 699 210 37 0 0 chr17 15038932 15038959 -80233692 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 699 238 247 21 73 chr17 15039072 15039168 -80233483 - PB1D7 SINE Alu -8 112 22 4 699 415 252 42 139 chr17 15040724 15041083 -80231568 - RLTR15 LTR ERVK -3 356 33 4 699 3216 300 41 20 chr17 15042074 15042593 -80230058 + Lx8 LINE L1 5459 6017 -1456 4 699 1219 48 7 0 chr17 15042593 15042740 -80229911 + B1_Mus1 SINE Alu 1 148 0 4 699 3216 306 133 35 chr17 15042740 15043944 -80228707 + Lx8 LINE L1 6018 7340 -133 4 699 246 62 0 0 chr17 15043944 15043976 -80228675 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 4 699 395 264 193 0 chr17 15043976 15044058 -80228593 + Lx8 LINE L1 7341 7444 -29 4 699 1188 41 13 13 chr17 15045363 15045512 -80227139 + B1_Mur4 SINE Alu 2 150 0 4 699 180 0 0 0 chr17 15045512 15045532 -80227119 + (A)n Simple_repeat Simple_repeat 1 20 0 4 699 1648 155 70 4 chr17 15046480 15046925 -80225726 + MT2A LTR ERVL 5 528 -5 4 699 26 30 0 0 chr17 15047186 15047219 -80225432 + AT_rich Low_complexity Low_complexity 1 33 0 4 699 412 316 41 14 chr17 15047337 15047539 -80225112 - B4A SINE B4 -5 287 1 5 699 1043 133 155 0 chr17 15047616 15047797 -80224854 + Lx4A LINE L1 6846 7054 -4 5 699 270 0 0 0 chr17 15047797 15047827 -80224824 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 5 699 311 341 30 6 chr17 15047831 15047996 -80224655 - Tigger5 DNA MER2_type -45 2361 2193 5 699 432 319 89 10 chr17 15048050 15048253 -80224398 - Tigger5 DNA MER2_type -2184 222 4 5 699 544 280 63 52 chr17 15049228 15049494 -80223157 + L1MA8 LINE L1 5539 5811 -480 5 699 710 258 50 0 chr17 15049494 15049676 -80222975 + B3A SINE B2 2 192 -6 5 699 544 284 82 50 chr17 15049676 15049723 -80222928 + L1MA8 LINE L1 5780 5830 -1866 5 699 249 294 65 0 chr17 15049705 15049797 -80222854 + L1ME3B LINE L1 6065 6162 -78 5 699 717 45 0 0 chr17 15049812 15049901 -80222750 + (GAAA)n Simple_repeat Simple_repeat 2 90 0 5 699 350 286 47 9 chr17 15049918 15050024 -80222627 + L1MA4 LINE L1 5821 5930 -370 5 699 333 204 133 51 chr17 15050064 15050162 -80222489 + L1MA8 LINE L1 5889 5994 -306 5 699 487 257 47 40 chr17 15051295 15051445 -80221206 + RMER30 DNA MER1_type 35 185 -17 5 699 830 192 0 20 chr17 15053103 15053252 -80219399 - B1_Mur3 SINE Alu -1 148 3 6 699 22 35 0 0 chr17 15054513 15054542 -80218109 + AT_rich Low_complexity Low_complexity 1 29 0 6 699 1221 54 0 0 chr17 15057555 15057702 -80214949 + B1_Mus2 SINE Alu 1 147 0 6 699 327 226 126 42 chr17 15058093 15058236 -80214415 - L1MA4 LINE L1 -364 5936 5782 6 699 303 28 0 0 chr17 15062670 15062706 -80209945 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 6 699 1177 22 0 0 chr17 15062706 15062840 -80209811 - B1_Mus1 SINE Alu -13 135 2 6 699 1049 212 24 24 chr17 15062861 15063073 -80209578 - B3 SINE B2 0 216 5 6 699 608 252 20 27 chr17 15063391 15063538 -80209113 + RSINE1 SINE B4 8 153 -12 6 699 207 0 0 0 chr17 15063580 15063603 -80209048 + (GA)n Simple_repeat Simple_repeat 2 24 0 6 699 1697 150 93 34 chr17 15064202 15064555 -80208096 + ORR1C2 LTR MaLR 1 374 -10 6 699 1030 43 7 14 chr17 15066187 15066327 -80206324 + B1_Mus1 SINE Alu 8 146 -2 7 699 272 45 0 64 chr17 15066327 15066374 -80206277 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 7 699 1871 153 68 127 chr17 15066696 15067199 -80205452 - RMER19B LTR ERVK -427 475 3 7 699 1042 243 65 7 chr17 15067333 15067644 -80205007 - ORR1D1 LTR MaLR 0 359 1 7 699 282 116 0 0 chr17 15068137 15068180 -80204471 + (TGGA)n Simple_repeat Simple_repeat 3 45 0 7 699 1224 240 139 8 chr17 15069052 15069418 -80203233 - MTD LTR MaLR 0 419 6 7 699 726 154 0 0 chr17 15070703 15070833 -80201818 + GA-rich Low_complexity Low_complexity 4 133 0 7 699 1676 123 12 84 chr17 15072178 15072524 -80200127 - RLTRETN_Mm LTR ERVK 0 322 2 7 87 1516 263 118 30 chr17 15072940 15073568 -80199083 + Lx8 LINE L1 6741 7423 -50 7 700 336 200 0 0 chr17 15073571 15073646 -80199005 + GA-rich Low_complexity Low_complexity 3 77 0 7 700 299 202 32 35 chr17 15073820 15073912 -80198739 + MTEa LTR MaLR 181 276 -103 8 700 1277 256 55 138 chr17 15074015 15074308 -80198343 - Lx8 LINE L1 -1551 5922 5629 8 700 387 0 0 0 chr17 15074308 15074351 -80198300 + (CATA)n Simple_repeat Simple_repeat 3 45 0 8 700 1277 255 51 155 chr17 15074351 15074408 -80198243 - Lx8 LINE L1 -248 5632 5619 8 700 414 0 0 0 chr17 15074408 15074454 -80198197 + (ATATG)n Simple_repeat Simple_repeat 1 46 0 8 700 1277 255 51 155 chr17 15074454 15074845 -80197806 - Lx8 LINE L1 -262 5618 5247 8 700 241 182 0 0 chr17 15075730 15075774 -80196877 - L2 LINE L2 -841 2578 2535 8 700 189 107 0 0 chr17 15076138 15076166 -80196485 + (CA)n Simple_repeat Simple_repeat 2 29 0 8 700 1217 215 208 40 chr17 15076271 15076727 -80195924 - MT2A LTR ERVL 0 533 1 8 700 973 275 28 72 chr17 15076766 15077087 -80195564 - Lx8 LINE L1 -2 7471 7165 8 700 276 30 0 0 chr17 15077093 15077126 -80195525 + (T)n Simple_repeat Simple_repeat 1 33 0 8 700 1693 21 0 0 chr17 15077130 15077322 -80195329 - B2_Mm1a SINE B2 0 193 2 8 700 225 280 0 0 chr17 15077323 15077373 -80195278 - Lx8 LINE L1 -324 7149 7100 8 700 232 355 23 68 chr17 15077451 15077584 -80195067 + MLT1J2 LTR MaLR 70 196 -252 9 700 180 0 0 0 chr17 15078581 15078601 -80194050 + (TTG)n Simple_repeat Simple_repeat 2 21 0 9 700 207 315 32 21 chr17 15080390 15080484 -80192167 + C-rich Low_complexity Low_complexity 3 97 0 9 700 195 100 0 0 chr17 15082569 15082599 -80190052 + (TC)n Simple_repeat Simple_repeat 1 30 0 9 700 21 0 0 0 chr17 15084171 15084192 -80188459 + AT_rich Low_complexity Low_complexity 1 21 0 9 700 23 0 0 0 chr17 15084694 15084717 -80187934 + AT_rich Low_complexity Low_complexity 1 23 0 9 700 486 0 0 0 chr17 15091681 15091735 -80180916 + (TAA)n Simple_repeat Simple_repeat 3 56 0 9 700 26 50 0 0 chr17 15092874 15092914 -80179737 + AT_rich Low_complexity Low_complexity 1 40 0 9 700 270 0 0 0 chr17 15093194 15093224 -80179427 + (CA)n Simple_repeat Simple_repeat 1 30 0 9 700 1185 48 0 7 chr17 15093976 15094123 -80178528 + B1_Mus2 SINE Alu 2 147 0 9 700 200 59 29 0 chr17 15094125 15094159 -80178492 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 700 723 211 36 42 chr17 15094322 15094515 -80178136 + B3A SINE B2 3 194 -4 1 700 265 242 195 116 chr17 15094930 15095271 -80177380 + L1MB3 LINE L1 4908 5299 -847 1 700 480 165 296 0 chr17 15095271 15095386 -80177265 + B1_Mur2 SINE Alu 1 149 0 1 700 931 251 223 31 chr17 15095386 15096111 -80176540 + L1MB3 LINE L1 5291 6164 -7 1 700 380 296 141 0 chr17 15096187 15096322 -80176329 - B3A SINE B2 -42 156 3 1 700 294 267 11 33 chr17 15098169 15098351 -80174300 + (CCG)n Simple_repeat Simple_repeat 2 179 0 1 700 245 261 5 69 chr17 15098443 15098632 -80174019 + (CCCCG)n Simple_repeat Simple_repeat 3 179 0 1 700 1152 62 0 7 chr17 15099885 15100021 -80172630 + B1_Mm SINE Alu 2 137 -10 1 700 347 0 23 0 chr17 15100021 15100064 -80172587 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1 700 604 221 206 82 chr17 15100140 15100470 -80172181 - MTE2b LTR MaLR 0 379 9 1 700 621 203 67 15 chr17 15100868 15101003 -80171648 - B1_Mur2 SINE Alu -7 142 1 1 700 437 244 78 9 chr17 15101511 15101627 -80171024 + B3A SINE B2 9 132 -66 1 700 341 261 148 11 chr17 15102011 15102219 -80170432 + MLT1H LTR MaLR 1 283 -312 1 700 1134 71 0 0 chr17 15102706 15102846 -80169805 - B1_Mus1 SINE Alu -7 141 2 1 700 1816 188 84 8 chr17 15103337 15103728 -80168923 - MTC LTR MaLR 0 421 1 1 700 1035 121 22 39 chr17 15103728 15103908 -80168743 + B2_Mm2 SINE B2 3 179 -16 1 700 288 0 0 0 chr17 15103909 15103941 -80168710 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1 700 457 183 26 17 chr17 15103952 15104069 -80168582 - MTC-int LTR MaLR 0 1258 1141 1 700 781 169 7 7 chr17 15104118 15104261 -80168390 - B1_Mur2 SINE Alu 0 149 7 1 700 642 209 41 41 chr17 15104863 15105008 -80167643 + B1_Mur1 SINE Alu 1 145 -4 1 700 859 209 118 0 chr17 15105406 15105593 -80167058 - B3 SINE B2 -6 210 2 1 700 417 308 91 5 chr17 15106254 15106453 -80166198 + MER34 LTR ERV1 4 219 -323 1 700 448 314 51 25 chr17 15106630 15106826 -80165825 + ERVL-B4-int LTR ERVL 2033 2233 -3481 1 700 928 274 124 9 chr17 15106851 15107190 -80165461 + ERVL-B4-int LTR ERVL 2334 2711 -3003 1 700 375 23 0 0 chr17 15107265 15107309 -80165342 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 700 789 285 130 15 chr17 15107729 15108060 -80164591 + MTEa LTR MaLR 11 379 0 1 700 396 0 0 0 chr17 15108281 15108325 -80164326 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 1 700 1095 85 7 0 chr17 15108327 15108480 -80164171 - B2_Mm1t SINE B2 -38 155 2 1 700 384 22 0 0 chr17 15108533 15108578 -80164073 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 700 612 269 123 40 chr17 15108898 15109273 -80163378 - L1M3 LINE L1 -2031 4109 3704 1 700 29 47 0 0 chr17 15109467 15109510 -80163141 + AT_rich Low_complexity Low_complexity 1 43 0 1 700 248 233 9 0 chr17 15109510 15109578 -80163073 - ID4 SINE ID -74 78 9 1 700 718 278 76 58 chr17 15109582 15109881 -80162770 - L1MCa LINE L1 -3573 2748 2441 1 700 1671 26 5 0 chr17 15109881 15110073 -80162578 - B2_Mm1t SINE B2 0 193 1 1 700 718 248 153 12 chr17 15110073 15110332 -80162319 - L1MCa LINE L1 -3881 2440 2156 1 700 608 178 25 0 chr17 15110576 15110694 -80161957 - URR1A DNA MER1_type -27 199 79 1 700 610 237 232 57 chr17 15110726 15110932 -80161719 - L1MCa LINE L1 -4665 1843 1593 1 700 1766 79 55 8 chr17 15110932 15111186 -80161465 + L1_Mus3 LINE L1 6373 6638 0 1 700 610 237 232 57 chr17 15111186 15111500 -80161151 - L1MCa LINE L1 -4916 1592 1233 1 700 1360 76 43 0 chr17 15111500 15111685 -80160966 - B2_Mm2 SINE B2 -1 194 2 1 700 610 237 232 57 chr17 15111685 15111776 -80160875 - L1MCa LINE L1 -5276 1232 1125 1 700 207 0 0 0 chr17 15111851 15111874 -80160777 + (A)n Simple_repeat Simple_repeat 1 23 0 1 700 1257 87 40 0 chr17 15111875 15112048 -80160603 - B2_Mm2 SINE B2 -14 181 2 1 700 741 265 46 108 chr17 15112049 15112400 -80160251 - L1MCa LINE L1 -5698 810 482 1 700 333 0 0 0 chr17 15112430 15112467 -80160184 + (CCA)n Simple_repeat Simple_repeat 2 38 0 1 700 248 202 44 11 chr17 15112524 15112614 -80160037 + (TA)n Simple_repeat Simple_repeat 1 93 0 1 700 585 252 63 114 chr17 15118764 15119019 -80153632 + B4A SINE B4 2 243 -49 1 700 183 156 0 0 chr17 15119785 15119817 -80152834 + (TTA)n Simple_repeat Simple_repeat 3 34 0 1 700 4861 47 23 60 chr17 15120186 15120848 -80151803 - L1_Mus1 LINE L1 0 6567 5931 1 700 216 276 87 24 chr17 15121359 15121485 -80151166 + MIR SINE MIR 123 256 -6 1 700 367 306 50 0 chr17 15121488 15121609 -80151042 + RSINE1 SINE B4 4 130 -35 1 700 1498 87 0 0 chr17 15121936 15122131 -80150520 + B2_Mm2 SINE B2 1 195 0 1 700 614 60 0 0 chr17 15122144 15122228 -80150423 + B1_Mus2 SINE Alu 64 147 0 1 700 389 287 43 0 chr17 15122526 15122641 -80150010 - RSINE1 SINE B4 -35 130 11 1 700 1098 58 0 14 chr17 15123242 15123383 -80149268 - B1_Mus2 SINE Alu -8 139 1 1 700 279 0 0 0 chr17 15124809 15124840 -80147811 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 700 399 212 40 0 chr17 15125144 15125243 -80147408 + B3A SINE B2 2 104 -94 1 700 518 277 15 0 chr17 15125412 15125489 -80147162 + ID SINE ID 5 83 -141 1 700 346 177 186 0 chr17 15125489 15125566 -80147085 + B1F2 SINE Alu 3 92 -57 1 700 207 0 0 0 chr17 15125577 15125600 -80147051 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1 700 1152 68 0 0 chr17 15126195 15126342 -80146309 + B1_Mus1 SINE Alu 2 148 0 1 700 2672 95 21 21 chr17 15126607 15127028 -80145623 - BGLII LTR ERVK 0 421 1 1 700 3591 55 87 4 chr17 15128090 15128563 -80144088 - RLTR1B LTR ERV1 0 512 1 1 700 3245 35 3 47 chr17 15128563 15129176 -80143475 - RLTR1B-int LTR ERV1 0 3299 2635 1 700 283 81 0 0 chr17 15129173 15129210 -80143441 - RLTR1B-int LTR ERV1 -1190 2109 2073 1 700 1260 96 6 0 chr17 15129208 15129386 -80143265 - RLTR1B-int LTR ERV1 -2657 642 464 1 700 294 267 11 33 chr17 15129752 15129934 -80142717 + (CCG)n Simple_repeat Simple_repeat 2 179 0 1 700 245 261 5 69 chr17 15130026 15130215 -80142436 + (CCCCG)n Simple_repeat Simple_repeat 3 179 0 1 700 1152 62 0 7 chr17 15131469 15131605 -80141046 + B1_Mm SINE Alu 2 137 -10 1 700 437 0 19 0 chr17 15131605 15131658 -80140993 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 1 700 604 221 206 82 chr17 15131734 15132064 -80140587 - MTE2b LTR MaLR 0 379 9 1 700 621 203 67 15 chr17 15132462 15132597 -80140054 - B1_Mur2 SINE Alu -7 142 1 1 700 437 244 78 9 chr17 15133105 15133221 -80139430 + B3A SINE B2 9 132 -66 1 700 341 261 148 11 chr17 15133605 15133813 -80138838 + MLT1H LTR MaLR 1 283 -312 1 700 1134 71 0 0 chr17 15134300 15134440 -80138211 - B1_Mus1 SINE Alu -7 141 2 1 700 1816 188 84 8 chr17 15134931 15135322 -80137329 - MTC LTR MaLR 0 421 1 1 700 1035 121 22 39 chr17 15135322 15135502 -80137149 + B2_Mm2 SINE B2 3 179 -16 1 700 213 65 0 0 chr17 15135503 15135534 -80137117 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 700 433 191 26 17 chr17 15135548 15135665 -80136986 - MTC-int LTR MaLR 0 1258 1141 1 700 781 169 7 7 chr17 15135714 15135857 -80136794 - B1_Mur2 SINE Alu 0 149 7 1 700 690 216 43 7 chr17 15136459 15136599 -80136052 + B1_Mur1 SINE Alu 1 145 -4 1 700 859 209 118 0 chr17 15136997 15137184 -80135467 - B3 SINE B2 -6 210 2 1 700 408 310 91 5 chr17 15137845 15138043 -80134608 + MER34 LTR ERV1 4 218 -324 1 700 448 314 51 25 chr17 15138221 15138417 -80134234 + ERVL-B4-int LTR ERVL 2033 2233 -3481 1 700 928 274 124 9 chr17 15138442 15138781 -80133870 + ERVL-B4-int LTR ERVL 2334 2711 -3003 1 700 393 22 0 0 chr17 15138856 15138902 -80133749 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 700 789 285 130 15 chr17 15139322 15139653 -80132998 + MTEa LTR MaLR 11 379 0 1 700 396 0 0 0 chr17 15139874 15139918 -80132733 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 1 700 1095 85 7 0 chr17 15139920 15140073 -80132578 - B2_Mm1t SINE B2 -38 155 2 1 700 186 43 0 0 chr17 15140126 15140149 -80132502 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 700 584 272 123 40 chr17 15140467 15140842 -80131809 - L1M3 LINE L1 -2031 4109 3704 1 700 29 47 0 0 chr17 15141036 15141079 -80131572 + AT_rich Low_complexity Low_complexity 1 43 0 1 700 248 233 9 0 chr17 15141079 15141147 -80131504 - ID4 SINE ID -74 78 9 1 700 848 262 128 13 chr17 15141151 15141682 -80130969 - L1MCa LINE L1 -3573 2748 2156 1 700 629 169 25 0 chr17 15141926 15142044 -80130607 - URR1A DNA MER1_type -27 199 79 1 700 566 238 229 62 chr17 15142076 15142282 -80130369 - L1MCa LINE L1 -4665 1843 1593 1 700 1779 75 55 8 chr17 15142282 15142536 -80130115 + L1_Mus3 LINE L1 6373 6638 0 1 700 566 238 229 62 chr17 15142536 15142854 -80129797 - L1MCa LINE L1 -4916 1592 1233 1 700 1360 76 43 0 chr17 15142854 15143039 -80129612 - B2_Mm2 SINE B2 -1 194 2 1 700 566 238 229 62 chr17 15143039 15143130 -80129521 - L1MCa LINE L1 -5276 1232 1125 1 700 207 0 0 0 chr17 15143205 15143228 -80129423 + (A)n Simple_repeat Simple_repeat 1 23 0 1 700 1234 92 40 0 chr17 15143229 15143402 -80129249 - B2_Mm2 SINE B2 -14 181 2 1 700 666 262 44 140 chr17 15143403 15143767 -80128884 - L1MCa LINE L1 -5698 810 482 1 700 387 0 0 0 chr17 15143797 15143840 -80128811 + (CCA)n Simple_repeat Simple_repeat 2 44 0 1 700 248 202 44 11 chr17 15143897 15143987 -80128664 + (TA)n Simple_repeat Simple_repeat 1 93 0 1 700 585 252 63 114 chr17 15150136 15150391 -80122260 + B4A SINE B4 2 243 -49 1 700 183 156 0 0 chr17 15151157 15151189 -80121462 + (TTA)n Simple_repeat Simple_repeat 3 34 0 1 700 4844 48 23 60 chr17 15151557 15152219 -80120432 - L1_Mus1 LINE L1 0 6567 5931 1 700 216 276 87 24 chr17 15152730 15152856 -80119795 + MIR SINE MIR 123 256 -6 1 700 367 306 50 0 chr17 15152859 15152980 -80119671 + RSINE1 SINE B4 4 130 -35 1 700 1498 87 0 0 chr17 15153307 15153502 -80119149 + B2_Mm2 SINE B2 1 195 0 1 700 616 60 0 0 chr17 15153512 15153596 -80119055 + B1_Mus2 SINE Alu 64 147 0 1 700 389 287 43 0 chr17 15153893 15154008 -80118643 - RSINE1 SINE B4 -35 130 11 1 700 1098 58 0 14 chr17 15154609 15154750 -80117901 - B1_Mus2 SINE Alu -8 139 1 1 700 261 0 0 0 chr17 15156179 15156208 -80116443 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 700 399 212 40 0 chr17 15156512 15156611 -80116040 + B3A SINE B2 2 104 -94 2 700 518 277 15 0 chr17 15156780 15156857 -80115794 + ID SINE ID 5 83 -141 2 700 346 177 186 0 chr17 15156857 15156934 -80115717 + B1F2 SINE Alu 3 92 -57 2 700 207 0 0 0 chr17 15156945 15156968 -80115683 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2 700 1152 68 0 0 chr17 15157563 15157710 -80114941 + B1_Mus1 SINE Alu 2 148 0 2 700 2694 92 21 21 chr17 15157974 15158395 -80114256 - BGLII LTR ERVK 0 421 1 2 700 3591 55 87 4 chr17 15159458 15159931 -80112720 - RLTR1B LTR ERV1 0 512 1 2 700 3245 35 3 47 chr17 15159931 15160544 -80112107 - RLTR1B-int LTR ERV1 0 3299 2635 2 700 283 81 0 0 chr17 15160541 15160578 -80112073 - RLTR1B-int LTR ERV1 -1190 2109 2073 2 700 1260 96 6 0 chr17 15160576 15160754 -80111897 - RLTR1B-int LTR ERV1 -2657 642 464 2 700 294 267 11 33 chr17 15161120 15161302 -80111349 + (CCG)n Simple_repeat Simple_repeat 2 179 0 2 700 245 261 5 69 chr17 15161394 15161583 -80111068 + (CCCCG)n Simple_repeat Simple_repeat 3 179 0 2 700 1152 62 0 7 chr17 15162837 15162973 -80109678 + B1_Mm SINE Alu 2 137 -10 2 700 437 0 19 0 chr17 15162973 15163026 -80109625 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 2 700 604 221 206 82 chr17 15163102 15163432 -80109219 - MTE2b LTR MaLR 0 379 9 2 700 621 203 67 15 chr17 15163830 15163965 -80108686 - B1_Mur2 SINE Alu -7 142 1 2 700 437 244 78 9 chr17 15164473 15164589 -80108062 + B3A SINE B2 9 132 -66 2 700 341 261 148 11 chr17 15164973 15165181 -80107470 + MLT1H LTR MaLR 1 283 -312 2 700 183 42 0 0 chr17 15165643 15165667 -80106984 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2 700 1134 71 0 0 chr17 15165668 15165808 -80106843 - B1_Mus1 SINE Alu -7 141 2 2 700 1816 188 84 8 chr17 15166298 15166689 -80105962 - MTC LTR MaLR 0 421 1 2 700 1035 121 22 39 chr17 15166689 15166869 -80105782 + B2_Mm2 SINE B2 3 179 -16 2 700 213 65 0 0 chr17 15166870 15166901 -80105750 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 700 433 191 26 17 chr17 15166915 15167032 -80105619 - MTC-int LTR MaLR 0 1258 1141 2 700 781 169 7 7 chr17 15167081 15167224 -80105427 - B1_Mur2 SINE Alu 0 149 7 2 700 690 216 43 7 chr17 15167826 15167966 -80104685 + B1_Mur1 SINE Alu 1 145 -4 2 700 859 209 118 0 chr17 15168364 15168551 -80104100 - B3 SINE B2 -6 210 2 2 700 408 310 91 5 chr17 15169212 15169410 -80103241 + MER34 LTR ERV1 4 218 -324 2 700 448 314 51 25 chr17 15169588 15169784 -80102867 + ERVL-B4-int LTR ERVL 2033 2233 -3481 2 700 928 274 124 9 chr17 15169809 15170148 -80102503 + ERVL-B4-int LTR ERVL 2334 2711 -3003 2 700 393 22 0 0 chr17 15170223 15170269 -80102382 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 700 789 285 130 15 chr17 15170689 15171020 -80101631 + MTEa LTR MaLR 11 379 0 2 700 396 0 0 0 chr17 15171241 15171285 -80101366 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 2 700 1095 85 7 0 chr17 15171287 15171440 -80101211 - B2_Mm1t SINE B2 -38 155 2 2 700 186 43 0 0 chr17 15171493 15171516 -80101135 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 700 584 272 123 40 chr17 15171834 15172209 -80100442 - L1M3 LINE L1 -2031 4109 3704 2 700 29 47 0 0 chr17 15172403 15172446 -80100205 + AT_rich Low_complexity Low_complexity 1 43 0 2 700 248 233 9 0 chr17 15172446 15172514 -80100137 - ID4 SINE ID -74 78 9 2 700 865 260 128 13 chr17 15172518 15173049 -80099602 - L1MCa LINE L1 -3573 2748 2156 2 700 629 169 25 0 chr17 15173293 15173411 -80099240 - URR1A DNA MER1_type -27 199 79 2 700 566 238 229 62 chr17 15173443 15173649 -80099002 - L1MCa LINE L1 -4665 1843 1593 2 700 1779 75 55 8 chr17 15173649 15173903 -80098748 + L1_Mus3 LINE L1 6373 6638 0 2 700 566 238 229 62 chr17 15173903 15174221 -80098430 - L1MCa LINE L1 -4916 1592 1233 2 700 1360 76 43 0 chr17 15174221 15174406 -80098245 - B2_Mm2 SINE B2 -1 194 2 2 700 566 238 229 62 chr17 15174406 15174497 -80098154 - L1MCa LINE L1 -5276 1232 1125 2 700 216 0 0 0 chr17 15174572 15174596 -80098055 + (A)n Simple_repeat Simple_repeat 1 24 0 2 700 1234 92 40 0 chr17 15174597 15174770 -80097881 - B2_Mm2 SINE B2 -14 181 2 2 700 666 262 44 140 chr17 15174771 15175135 -80097516 - L1MCa LINE L1 -5698 810 482 2 700 387 0 0 0 chr17 15175165 15175208 -80097443 + (CCA)n Simple_repeat Simple_repeat 2 44 0 2 700 248 202 44 11 chr17 15175265 15175355 -80097296 + (TA)n Simple_repeat Simple_repeat 1 93 0 2 700 585 252 63 114 chr17 15181511 15181766 -80090885 + B4A SINE B4 2 243 -49 2 700 183 156 0 0 chr17 15182532 15182564 -80090087 + (TTA)n Simple_repeat Simple_repeat 3 34 0 2 700 4861 47 23 60 chr17 15182933 15183595 -80089056 - L1_Mus1 LINE L1 0 6567 5931 2 700 216 276 87 24 chr17 15184106 15184232 -80088419 + MIR SINE MIR 123 256 -6 2 700 367 306 50 0 chr17 15184235 15184356 -80088295 + RSINE1 SINE B4 4 130 -35 2 700 1498 87 0 0 chr17 15184683 15184878 -80087773 + B2_Mm2 SINE B2 1 195 0 2 700 616 60 0 0 chr17 15184891 15184975 -80087676 + B1_Mus2 SINE Alu 64 147 0 2 700 389 287 43 0 chr17 15185272 15185387 -80087264 - RSINE1 SINE B4 -35 130 11 2 700 1098 58 0 14 chr17 15185988 15186129 -80086522 - B1_Mus2 SINE Alu -8 139 1 2 700 261 0 0 0 chr17 15187484 15187513 -80085138 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 700 399 212 40 0 chr17 15187817 15187916 -80084735 + B3A SINE B2 2 104 -94 2 700 518 277 15 0 chr17 15188085 15188162 -80084489 + ID SINE ID 5 83 -141 2 700 346 177 186 0 chr17 15188162 15188239 -80084412 + B1F2 SINE Alu 3 92 -57 2 700 207 0 0 0 chr17 15188250 15188273 -80084378 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2 700 1141 75 0 0 chr17 15188868 15189015 -80083636 + B1_Mus1 SINE Alu 2 148 0 2 700 2755 92 19 14 chr17 15189275 15189694 -80082957 - BGLII LTR ERVK 0 421 1 2 700 3796 50 64 4 chr17 15190757 15191240 -80081411 - RLTR1B LTR ERV1 0 512 1 2 700 3268 30 8 44 chr17 15191240 15191850 -80080801 - RLTR1B-int LTR ERV1 0 3299 2635 2 700 284 81 0 0 chr17 15191847 15191884 -80080767 - RLTR1B-int LTR ERV1 -1190 2109 2073 2 700 2692 86 56 0 chr17 15191882 15192241 -80080410 - RLTR1B-int LTR ERV1 -2657 642 264 2 700 858 202 177 9 chr17 15192211 15192426 -80080225 - MMERGLN-int LTR ERV1 -7175 381 131 2 700 978 142 0 123 chr17 15192405 15192611 -80080040 - RLTR1B-int LTR ERV1 -3023 276 114 2 700 393 162 27 13 chr17 15192611 15192686 -80079965 + ID_B1 SINE B4 142 217 -7 2 700 221 216 59 0 chr17 15192642 15192693 -80079958 + PB1D10 SINE Alu 64 117 0 2 700 583 217 91 0 chr17 15194225 15194368 -80078283 - B3A SINE B2 -41 157 2 2 700 311 280 70 27 chr17 15194579 15194766 -80077885 - RMER15 LTR ERVL -12 563 369 2 700 483 18 0 0 chr17 15198799 15198855 -80073796 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 700 523 189 11 0 chr17 15198859 15198949 -80073702 - B1_Mur1 SINE Alu -38 111 21 2 700 308 302 81 32 chr17 15198995 15199118 -80073533 - RSINE1 SINE B4 -36 129 1 2 700 1195 213 30 121 chr17 15199118 15199524 -80073127 + MTE2a LTR MaLR 10 378 -1 2 700 324 303 34 0 chr17 15201241 15201330 -80071321 + B1F2 SINE Alu 7 98 -51 2 700 284 311 126 39 chr17 15201330 15201368 -80071283 + B4 SINE B4 92 229 -63 2 701 364 275 53 8 chr17 15206966 15207098 -80065553 - L1MC4a LINE L1 -1949 5933 5796 2 701 606 160 158 16 chr17 15207116 15207243 -80065408 - B1_Mur1 SINE Alu 0 149 5 2 701 366 326 78 48 chr17 15207503 15207877 -80064774 - L1MC4a LINE L1 -783 5363 4979 2 701 874 151 42 31 chr17 15209780 15209972 -80062679 - B2_Mm2 SINE B2 -1 194 1 2 701 1283 27 0 0 chr17 15209998 15210145 -80062506 + B1_Mm SINE Alu 1 147 0 2 701 596 231 50 0 chr17 15210504 15210625 -80062026 + B1_Mur1 SINE Alu 17 143 -6 2 701 216 182 0 0 chr17 15210625 15210669 -80061982 + GA-rich Low_complexity Low_complexity 2 45 0 2 701 1332 208 94 26 chr17 15211344 15211695 -80060956 + MTEa LTR MaLR 1 375 -4 2 701 261 0 0 0 chr17 15212846 15212875 -80059776 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 701 246 81 0 0 chr17 15212914 15212951 -80059700 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 701 270 148 0 0 chr17 15212990 15213044 -80059607 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 701 189 175 0 0 chr17 15213061 15213101 -80059550 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 701 180 0 0 0 chr17 15213134 15213154 -80059497 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 701 543 189 0 0 chr17 15213239 15213366 -80059285 + (CA)n Simple_repeat Simple_repeat 2 128 0 2 701 345 149 0 0 chr17 15213411 15213478 -80059173 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 701 537 152 0 0 chr17 15213524 15213629 -80059022 + (CA)n Simple_repeat Simple_repeat 2 106 0 2 701 245 218 103 0 chr17 15216540 15216627 -80056024 + MER33 DNA MER1_type 160 255 -69 2 701 1218 113 97 14 chr17 15216914 15217121 -80055530 + URR1A DNA MER1_type 2 225 -1 2 701 798 294 98 18 chr17 15218185 15218462 -80054189 + MT2A LTR ERVL 235 533 0 2 701 207 0 0 0 chr17 15218737 15218760 -80053891 + (CAGA)n Simple_repeat Simple_repeat 2 24 0 2 701 2509 173 34 23 chr17 15218876 15219551 -80053100 - RLTR31_Mm LTR ERVK 0 561 3 2 701 1181 227 44 62 chr17 15221829 15222214 -80050437 - ORR1C2 LTR MaLR -2 382 5 2 701 198 0 0 0 chr17 15223230 15223252 -80049399 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 2 701 203 158 0 0 chr17 15223340 15223378 -80049273 + C-rich Low_complexity Low_complexity 1 38 0 2 701 899 142 0 6 chr17 15223505 15223668 -80048983 + (TCCC)n Simple_repeat Simple_repeat 4 165 0 2 701 319 342 40 27 chr17 15223776 15223926 -80048725 + L1MEc LINE L1 1648 1799 -4601 2 701 192 40 0 0 chr17 15224688 15224713 -80047938 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 701 237 274 32 0 chr17 15224924 15224986 -80047665 + ID SINE ID 12 75 -149 2 701 1300 111 0 31 chr17 15227081 15227277 -80045374 - B2_Mm2 SINE B2 -4 191 2 2 701 36 23 0 0 chr17 15227704 15227747 -80044904 + AT_rich Low_complexity Low_complexity 1 43 0 2 701 186 103 0 0 chr17 15228148 15228177 -80044474 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 701 855 268 66 7 chr17 15228177 15228451 -80044200 - B4 SINE B4 0 292 3 2 701 219 69 0 0 chr17 15229228 15229257 -80043394 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 2 701 1432 79 11 0 chr17 15229338 15229528 -80043123 - B2_Mm1t SINE B2 0 193 2 2 701 922 147 123 16 chr17 15229964 15230151 -80042500 + B3 SINE B2 5 211 -5 2 701 315 0 0 0 chr17 15231047 15231082 -80041569 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 701 189 0 0 0 chr17 15231732 15231753 -80040898 + (TAGTG)n Simple_repeat Simple_repeat 5 25 0 3 701 1812 202 129 38 chr17 15232325 15232799 -80039852 - RLTR12B LTR ERVK -11 517 1 3 701 751 315 44 32 chr17 15234408 15234749 -80037902 - L1MA4 LINE L1 -300 6000 5656 3 701 643 223 93 145 chr17 15235715 15236105 -80036546 - RMER4B LTR ERVK -7 578 110 3 701 3469 38 0 26 chr17 15236173 15236602 -80036049 - L1Md_F2 LINE L1 -3 6579 6162 3 701 1043 25 0 0 chr17 15236602 15236720 -80035931 - L1Md_F2 LINE L1 -655 5927 5810 3 701 393 296 426 39 chr17 15237028 15237362 -80035289 + MLT1F LTR MaLR 85 547 -1 3 701 333 0 0 0 chr17 15239881 15239918 -80032733 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 701 337 311 77 6 chr17 15241228 15241396 -80031255 - MLT1D LTR MaLR -51 454 275 3 701 484 260 0 0 chr17 15241615 15241711 -80030940 - ID_B1 SINE B4 -2 222 127 3 701 889 157 0 7 chr17 15242397 15242551 -80030100 + Lx6 LINE L1 5790 5942 -1518 3 701 4901 207 43 2 chr17 15242547 15243483 -80029168 + Lx7 LINE L1 6336 7309 -387 3 701 256 200 43 0 chr17 15243509 15243579 -80029072 + T-rich Low_complexity Low_complexity 6 78 0 3 701 417 191 0 0 chr17 15243594 15243709 -80028942 + (CATA)n Simple_repeat Simple_repeat 1 115 0 3 701 347 152 138 12 chr17 15243712 15243792 -80028859 - L1_Mur3 LINE L1 -642 5238 5149 3 701 308 235 70 37 chr17 15244041 15244159 -80028492 - B1F SINE Alu 0 149 3 3 701 1272 34 0 0 chr17 15244780 15244927 -80027724 + B1_Mus2 SINE Alu 1 147 0 3 701 195 42 0 0 chr17 15244927 15244951 -80027700 + (A)n Simple_repeat Simple_repeat 1 24 0 3 701 988 118 268 6 chr17 15247031 15247210 -80025441 + URR1A DNA MER1_type 1 226 0 3 701 366 61 0 0 chr17 15247440 15247489 -80025162 + (TCC)n Simple_repeat Simple_repeat 3 51 0 3 701 432 0 0 0 chr17 15247495 15247543 -80025108 + (TC)n Simple_repeat Simple_repeat 2 49 0 3 701 429 95 0 0 chr17 15247862 15247925 -80024726 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 701 251 313 24 0 chr17 15251165 15251248 -80021403 - MER58B DNA MER1_type -15 326 242 3 701 852 174 118 18 chr17 15252405 15252575 -80020076 + URR1A DNA MER1_type 40 226 0 3 701 400 268 115 42 chr17 15252575 15252620 -80020031 - CYRA11_Mm Unknown Y-chromosome -446 171 113 3 701 267 296 93 31 chr17 15252614 15252743 -80019908 - MLT1A1 LTR MaLR -4 404 268 3 701 785 221 129 4 chr17 15252963 15253204 -80019447 + Lx9 LINE L1 7221 7491 -153 3 701 585 76 0 0 chr17 15253208 15253287 -80019364 + (TA)n Simple_repeat Simple_repeat 2 80 0 3 701 275 85 0 21 chr17 15253387 15253435 -80019216 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 701 216 0 0 0 chr17 15253492 15253516 -80019135 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 3 701 373 163 70 0 chr17 15253792 15253878 -80018773 - Lx LINE L1 -2 6652 6561 3 701 374 258 33 22 chr17 15254338 15254429 -80018222 - MIR SINE MIR -62 200 109 3 701 416 352 0 0 chr17 15256801 15256980 -80015671 + (CACAC)n Simple_repeat Simple_repeat 2 180 0 3 701 230 283 24 24 chr17 15257367 15257490 -80015161 + (CATAC)n Simple_repeat Simple_repeat 2 124 0 3 701 2482 76 50 6 chr17 15258770 15259112 -80013539 + L1Md_F2 LINE L1 6225 6581 -1 3 701 192 263 183 73 chr17 15260657 15260739 -80011912 - MIRm SINE MIR -8 268 178 3 701 331 221 101 81 chr17 15262308 15262456 -80010195 + HAL1-3A_ME LINE L1 2292 2442 -416 3 701 272 343 142 40 chr17 15264606 15264782 -80007869 + MLT1A1 LTR MaLR 1 194 -214 3 701 237 211 67 0 chr17 15265546 15265636 -80007015 + (TCTA)n Simple_repeat Simple_repeat 3 98 0 3 701 690 113 0 0 chr17 15265913 15266019 -80006632 + (TTTC)n Simple_repeat Simple_repeat 3 108 0 3 701 2788 109 40 0 chr17 15266052 15266454 -80006197 - Lx4A LINE L1 0 7058 6641 3 701 181 360 80 20 chr17 15268939 15269089 -80003562 + L2a LINE L2 3268 3426 0 3 701 566 217 0 85 chr17 15269696 15269837 -80002814 - RMER15 LTR ERVL 0 575 447 3 701 3911 135 43 8 chr17 15269837 15270457 -80002194 - RMER1A Other Other -24 1006 365 3 701 234 0 0 0 chr17 15270518 15270544 -80002107 + (CCA)n Simple_repeat Simple_repeat 1 26 0 3 701 2825 153 21 15 chr17 15270571 15271036 -80001615 - RMER15 LTR ERVL -107 468 1 3 701 292 291 24 54 chr17 15271686 15271823 -80000828 + MIR SINE MIR 32 157 -105 3 701 216 216 0 0 chr17 15272603 15272654 -79999997 + GA-rich Low_complexity Low_complexity 3 53 0 3 701 480 254 64 0 chr17 15272691 15272801 -79999850 + PB1 SINE Alu 11 127 0 3 701 437 0 0 19 chr17 15274146 15274200 -79998451 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 701 441 0 0 0 chr17 15274295 15274344 -79998307 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 701 264 359 51 0 chr17 15275342 15275459 -79997192 - L1M4 LINE L1 -1487 4659 4537 3 701 1039 248 4 34 chr17 15275500 15275767 -79996884 - Lx9 LINE L1 -1097 6547 6289 3 701 298 274 26 34 chr17 15275919 15276036 -79996615 - PB1D10 SINE Alu 0 117 2 3 701 225 327 39 29 chr17 15276530 15276634 -79996017 - L1M4 LINE L1 -2006 4140 4036 3 701 457 250 73 20 chr17 15276777 15276928 -79995723 + MLT1A1 LTR MaLR 3 161 -247 3 701 243 316 13 0 chr17 15277045 15277124 -79995527 - ID4_ SINE ID -2 81 2 3 701 372 127 0 0 chr17 15277205 15277235 -79995416 + (A)n Simple_repeat Simple_repeat 1 30 0 3 701 1152 69 7 0 chr17 15277235 15277380 -79995271 + B1_Mus2 SINE Alu 2 147 0 3 701 372 127 0 0 chr17 15277380 15277420 -79995231 + (A)n Simple_repeat Simple_repeat 1 40 0 3 701 965 26 8 0 chr17 15279841 15279958 -79992693 + B1_Mm SINE Alu 30 147 0 3 701 694 143 15 0 chr17 15279974 15280107 -79992544 + GA-rich Low_complexity Low_complexity 2 136 0 3 701 243 0 0 0 chr17 15280818 15280845 -79991806 + (GA)n Simple_repeat Simple_repeat 1 27 0 3 701 573 15 0 0 chr17 15280845 15280910 -79991741 + (TG)n Simple_repeat Simple_repeat 2 67 0 3 701 285 269 74 21 chr17 15281148 15281243 -79991408 + RMER15 LTR ERVL 476 575 0 3 701 394 263 51 29 chr17 15281364 15281501 -79991150 + MLT1A1 LTR MaLR 269 408 0 3 701 380 289 56 31 chr17 15284520 15284681 -79987970 + HAL1-2a_MD LINE L1 2330 2494 -530 3 701 809 179 50 0 chr17 15284727 15284867 -79987784 - B1_Mur3 SINE Alu -1 148 2 3 701 309 301 64 29 chr17 15284867 15285007 -79987644 + HAL1-2a_MD LINE L1 2388 2532 -492 3 701 495 190 162 8 chr17 15285104 15285221 -79987430 + B1_Mur2 SINE Alu 10 144 -5 3 701 360 207 27 0 chr17 15285223 15285334 -79987317 + GA-rich Low_complexity Low_complexity 1 114 0 3 701 783 278 14 10 chr17 15285361 15285568 -79987083 + B3 SINE B2 1 208 -8 3 701 522 257 21 62 chr17 15285986 15286131 -79986520 - MTEa LTR MaLR -240 139 1 3 701 339 291 21 0 chr17 15286574 15286669 -79985982 + ORR1E LTR MaLR 269 365 -14 3 701 320 328 115 106 chr17 15287814 15288162 -79984489 + ORR1E LTR MaLR 1 351 -8 3 701 219 186 0 0 chr17 15288341 15288384 -79984267 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 701 579 265 98 35 chr17 15288982 15289236 -79983415 + MLT1A0 LTR MaLR 6 275 -90 3 701 348 307 61 82 chr17 15289349 15289643 -79983008 - RLTR12B LTR ERVK 0 528 241 3 701 817 266 38 56 chr17 15289631 15289898 -79982753 - RLTR11B LTR ERVK -191 262 1 3 701 1025 205 60 56 chr17 15292255 15292524 -79980127 - MTEa LTR MaLR -9 370 101 3 701 409 209 0 75 chr17 15292557 15292650 -79980001 - MTEa LTR MaLR -235 144 59 3 701 730 152 71 26 chr17 15293459 15293614 -79979037 + ORR1A4 LTR MaLR 5 166 -228 3 701 961 67 0 0 chr17 15293620 15293740 -79978911 + B1_Mm SINE Alu 19 138 -9 3 701 287 276 107 98 chr17 15293756 15293961 -79978690 + MLT2D LTR ERVL 188 394 -20 3 701 1210 163 25 0 chr17 15293786 15293989 -79978662 + ORR1A4 LTR MaLR 122 329 0 3 701 183 242 31 31 chr17 15294390 15294454 -79978197 - L4 LINE RTE -1738 291 228 3 701 243 322 22 22 chr17 15294657 15294749 -79977902 - MLT1C LTR MaLR -339 128 37 3 701 209 226 0 97 chr17 15295507 15295600 -79977051 + A-rich Low_complexity Low_complexity 5 88 0 3 701 681 93 0 0 chr17 15295629 15295736 -79976915 + (CA)n Simple_repeat Simple_repeat 2 108 0 3 701 338 312 45 46 chr17 15295752 15296059 -79976592 + L1ME1 LINE L1 4482 4798 -1348 3 701 400 322 116 44 chr17 15296194 15296526 -79976125 + L1ME1 LINE L1 4892 5260 -886 3 701 385 160 103 9 chr17 15296608 15296715 -79975936 - Lx9 LINE L1 -1 7643 7527 3 701 228 333 40 54 chr17 15296724 15296788 -79975863 - RLTR21 LTR ERVK -342 1230 1170 3 701 2614 74 3 0 chr17 15296788 15297114 -79975537 + ORR1A2 LTR MaLR 1 327 0 3 701 228 333 40 54 chr17 15297114 15297198 -79975453 - RLTR21 LTR ERVK -403 1169 1084 3 701 5317 183 59 2 chr17 15297201 15298165 -79974486 - Lx9 LINE L1 -240 7404 6386 3 701 7664 224 68 63 chr17 15298176 15300809 -79971842 - Lx9 LINE L1 -1554 6090 3403 3 701 429 323 47 17 chr17 15300823 15301056 -79971595 + L1ME1 LINE L1 5315 5554 -625 3 701 275 280 171 58 chr17 15301231 15301489 -79971162 + L1ME1 LINE L1 5874 6160 -19 3 701 219 36 0 0 chr17 15301498 15301526 -79971125 + (ATTG)n Simple_repeat Simple_repeat 1 28 0 3 701 1132 226 30 22 chr17 15302132 15302403 -79970248 - RMER15 LTR ERVL 0 575 303 3 701 484 302 98 14 chr17 15302426 15302721 -79969930 + L1MB8 LINE L1 4979 5298 -848 3 701 768 281 10 10 chr17 15302719 15302920 -79969731 + Lx8 LINE L1 6675 6875 -598 3 701 619 203 239 74 chr17 15302921 15303184 -79969467 + RLTR11A LTR ERVK 1 266 -262 3 701 368 152 54 62 chr17 15303376 15303472 -79969179 + RLTR43A LTR ERVK 201 299 -65 3 701 419 0 20 0 chr17 15303472 15303523 -79969128 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 701 368 152 54 62 chr17 15303523 15303538 -79969113 + RLTR43A LTR ERVK 300 310 -54 3 701 964 232 24 68 chr17 15303595 15303845 -79968806 + RLTR11A LTR ERVK 284 522 -6 3 701 1345 275 119 28 chr17 15303851 15304382 -79968269 + Lx8 LINE L1 6869 7447 -26 3 701 466 212 0 0 chr17 15304481 15304566 -79968085 + MLT2B3 LTR ERVL 223 307 -247 3 701 1510 265 49 12 chr17 15304659 15305086 -79967565 + ERVL-int LTR ERVL 4599 5041 -716 3 701 1184 246 15 0 chr17 15305133 15305397 -79967254 + ERVL-int LTR ERVL 5088 5355 -406 3 701 210 143 0 0 chr17 15305408 15305443 -79967208 + (TTG)n Simple_repeat Simple_repeat 3 37 0 3 701 2020 232 7 17 chr17 15305447 15305851 -79966800 + MTD LTR MaLR 12 411 -8 3 701 1080 312 182 3 chr17 15305862 15306444 -79966207 + MLT2B5 LTR ERVL 25 710 -7 4 701 331 160 15 4 chr17 15306458 15306540 -79966111 + L1MB8 LINE L1 5692 5777 -401 3 701 814 271 67 17 chr17 15306588 15306828 -79965823 + MER2 DNA MER2_type 93 344 -1 4 701 333 0 0 0 chr17 15306834 15306871 -79965780 - HAL1-3A_ME LINE L1 -846 2012 1976 4 701 309 89 0 0 chr17 15306871 15306916 -79965735 + (TCTG)n Simple_repeat Simple_repeat 3 47 0 4 701 302 183 0 16 chr17 15306919 15306980 -79965671 - HAL1-3A_ME LINE L1 -824 2034 1975 4 701 192 158 0 0 chr17 15306992 15307030 -79965621 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 701 786 270 34 27 chr17 15307058 15307386 -79965265 + L1MB8 LINE L1 5849 6178 0 3 701 227 338 0 14 chr17 15307435 15307507 -79965144 + Charlie14a DNA MER1_type 3 73 -1091 4 701 181 322 108 42 chr17 15308466 15308586 -79964065 + MIRc SINE MIR 92 219 -49 4 701 1016 281 109 21 chr17 15308948 15309071 -79963580 - ORR1D1 LTR MaLR -2 372 217 4 701 1772 123 157 14 chr17 15309071 15309416 -79963235 - ORR1B1 LTR MaLR 0 394 1 4 701 1016 281 109 21 chr17 15309416 15309623 -79963028 - ORR1D1 LTR MaLR -158 216 14 4 701 289 227 214 57 chr17 15310276 15310416 -79962235 + L1M5 LINE L1 5481 5642 -536 4 701 406 282 44 33 chr17 15310699 15310879 -79961772 + L1M5 LINE L1 5641 5822 -357 4 701 339 202 0 0 chr17 15310880 15310969 -79961682 + (TG)n Simple_repeat Simple_repeat 1 89 0 4 701 195 170 0 0 chr17 15313204 15313251 -79959400 + A-rich Low_complexity Low_complexity 2 48 0 4 701 1698 107 72 201 chr17 15313752 15314126 -79958525 - ORR1A3 LTR MaLR 0 326 1 4 701 180 231 37 37 chr17 15314723 15314777 -79957874 - L3 LINE CR1 -3406 1083 1030 4 701 259 315 142 18 chr17 15318470 15318583 -79954068 + MER2 DNA MER2_type 6 132 -213 4 701 472 256 11 117 chr17 15319273 15319556 -79953095 + RMER17C LTR ERVK 1 253 -157 4 701 543 276 67 80 chr17 15319540 15319839 -79952812 + RMER17C LTR ERVK 84 378 -32 4 701 305 341 110 42 chr17 15320068 15320331 -79952320 + ORR1E LTR MaLR 56 336 -23 4 701 207 0 0 0 chr17 15320372 15320395 -79952256 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 701 1528 180 116 6 chr17 15323591 15323927 -79948724 - ORR1D1 LTR MaLR -1 373 1 4 701 317 238 139 0 chr17 15324167 15324289 -79948362 - Ricksha_c DNA MuDR -1131 917 779 4 701 801 278 149 42 chr17 15324299 15324701 -79947950 - MLT2B5 LTR ERVL -241 476 32 4 701 474 339 0 0 chr17 15328360 15328475 -79944176 - PB1D7 SINE Alu -5 115 1 4 701 207 254 68 0 chr17 15330006 15330065 -79942586 - L2a LINE L2 -5 3421 3359 4 701 234 0 0 0 chr17 15331867 15331893 -79940758 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 701 381 304 10 10 chr17 15333768 15333871 -79938780 + PB1D7 SINE Alu 7 109 -11 4 701 423 0 0 0 chr17 15333896 15333943 -79938708 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 701 623 306 113 9 chr17 15334610 15334683 -79937968 + B4 SINE B4 3 79 -213 4 701 270 0 0 0 chr17 15334683 15334713 -79937938 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 701 623 306 113 9 chr17 15334713 15334860 -79937791 + B4 SINE B4 80 245 -47 4 701 197 275 101 0 chr17 15335151 15335220 -79937431 + MIRc SINE MIR 71 146 -122 4 702 201 26 79 0 chr17 15338994 15339032 -79933619 + (CAA)n Simple_repeat Simple_repeat 2 42 0 4 702 252 0 0 0 chr17 15339397 15339425 -79933226 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 4 702 476 307 114 26 chr17 15339425 15339733 -79932918 + L1M3 LINE L1 4280 4614 -1526 4 702 327 315 120 30 chr17 15339736 15339973 -79932678 + L1M3 LINE L1 4744 5010 -1136 4 702 324 48 0 0 chr17 15340230 15340272 -79932379 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 4 702 963 163 0 0 chr17 15341041 15341182 -79931469 - B1_Mur2 SINE Alu -7 142 2 4 702 411 21 0 0 chr17 15342187 15342235 -79930416 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 702 431 311 29 0 chr17 15342262 15342365 -79930286 - RSINE1 SINE B4 -57 108 3 4 702 270 0 0 0 chr17 15342379 15342409 -79930242 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 702 192 40 0 0 chr17 15342555 15342580 -79930071 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 4 702 1033 184 117 59 chr17 15343108 15343283 -79929368 - RMER17C LTR ERVK 0 410 220 4 702 429 20 0 0 chr17 15343283 15343333 -79929318 + (GA)n Simple_repeat Simple_repeat 2 51 0 4 702 1033 184 117 59 chr17 15343333 15343532 -79929119 - RMER17C LTR ERVK -191 219 14 4 702 617 243 101 79 chr17 15346192 15346469 -79926182 + RMER5 LTR ERV1 15 297 -237 4 702 331 346 28 0 chr17 15346556 15346663 -79925988 + RMER5 LTR ERV1 425 534 0 4 702 421 255 175 29 chr17 15347529 15347735 -79924916 + Lx9 LINE L1 6168 6403 -1241 4 702 907 126 32 19 chr17 15347754 15347908 -79924743 + ORR1A3 LTR MaLR 56 211 -115 4 702 716 102 0 114 chr17 15347928 15348060 -79924591 - ORR1A3 LTR MaLR -209 117 1 4 702 2826 214 24 2 chr17 15348146 15348728 -79923923 + Lx9 LINE L1 6923 7517 -127 4 702 462 187 0 0 chr17 15348728 15348819 -79923832 + (TG)n Simple_repeat Simple_repeat 2 92 0 4 702 488 154 92 26 chr17 15348870 15349023 -79923628 + Lx9 LINE L1 7481 7643 -1 4 702 3853 128 13 123 chr17 15349450 15350215 -79922436 + RMER6A LTR ERVK 57 737 -19 4 702 180 97 0 0 chr17 15350265 15350296 -79922355 + (G)n Simple_repeat Simple_repeat 1 31 0 4 702 234 306 39 77 chr17 15350517 15350595 -79922056 + ID4_ SINE ID 8 82 -1 4 702 255 286 8 118 chr17 15350622 15350671 -79921980 + RLTR25A LTR ERVK 476 579 -522 4 702 350 179 59 15 chr17 15350671 15350739 -79921912 + B1F1 SINE Alu 38 108 -41 4 702 423 0 0 0 chr17 15350742 15350789 -79921862 + (TCTTG)n Simple_repeat Simple_repeat 3 49 0 4 702 900 215 103 24 chr17 15353542 15353794 -79918857 - RMER21B LTR ERV1 -275 567 296 4 702 1234 240 108 34 chr17 15354359 15354683 -79917968 - MTE2b LTR MaLR -14 365 18 4 702 3682 278 146 30 chr17 15354697 15356111 -79916540 - MTE2b-int LTR MaLR -2 1578 1 4 702 1207 251 66 18 chr17 15356112 15356440 -79916211 - MTE2b LTR MaLR -20 359 16 4 702 184 349 30 37 chr17 15356442 15356576 -79916075 + MIRb SINE MIR 93 225 -43 4 702 539 147 493 20 chr17 15357025 15357171 -79915480 - B3 SINE B2 -1 215 1 4 702 235 286 141 16 chr17 15358236 15358364 -79914287 - MIRb SINE MIR -94 174 31 4 702 221 163 61 0 chr17 15358528 15358577 -79914074 + CT-rich Low_complexity Low_complexity 3 54 0 4 702 240 167 0 0 chr17 15358798 15358846 -79913805 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 702 342 0 0 0 chr17 15359037 15359075 -79913576 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 4 702 979 125 42 0 chr17 15359116 15359260 -79913391 - B1_Mur4 SINE Alu 0 150 1 4 702 344 182 0 0 chr17 15359938 15359993 -79912658 + MTEa LTR MaLR 21 75 -304 4 702 515 106 59 0 chr17 15359996 15360081 -79912570 + ORR1D2 LTR MaLR 281 370 0 4 702 354 239 59 18 chr17 15362081 15362251 -79910400 + (CAGAGA)n Simple_repeat Simple_repeat 4 180 0 4 702 285 235 5 32 chr17 15362259 15362444 -79910207 + GA-rich Low_complexity Low_complexity 1 180 0 4 702 318 302 9 0 chr17 15363021 15363174 -79909477 + (CA)n Simple_repeat Simple_repeat 1 154 0 4 702 352 295 202 11 chr17 15365969 15366147 -79906504 + MER58B DNA MER1_type 25 236 -105 4 702 502 276 24 106 chr17 15367125 15367158 -79905493 + MTEa LTR MaLR 185 214 -165 4 702 269 51 26 0 chr17 15367158 15367197 -79905454 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 702 532 249 32 47 chr17 15367197 15367333 -79905318 + MTEa LTR MaLR 215 340 -39 4 702 333 0 0 0 chr17 15367340 15367377 -79905274 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 702 219 69 0 0 chr17 15368508 15368537 -79904114 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 4 702 1366 254 212 19 chr17 15373867 15374348 -79898303 - MTE-int LTR MaLR -272 1308 735 4 702 3242 63 54 2 chr17 15377700 15378148 -79894503 + RLTR44C LTR ERVK 3 473 -29 4 702 449 311 63 26 chr17 15379865 15380228 -79892423 - L1ME2 LINE L1 -335 5844 5463 4 702 479 282 87 58 chr17 15380225 15380760 -79891891 - L1ME2 LINE L1 -1313 4833 4292 4 702 813 134 158 43 chr17 15380866 15381030 -79891621 + ORR1B2 LTR MaLR 6 188 -179 4 702 357 43 0 0 chr17 15381031 15381078 -79891573 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 702 366 331 125 40 chr17 15381170 15381346 -79891305 + B4A SINE B4 102 292 0 4 702 301 198 37 9 chr17 15381346 15381453 -79891198 + (CA)n Simple_repeat Simple_repeat 1 110 0 4 702 337 344 26 113 chr17 15381462 15381842 -79890809 - L1ME2 LINE L1 -2650 3496 3150 4 702 2050 84 58 64 chr17 15382575 15382904 -79889747 + ORR1A2 LTR MaLR 1 327 0 4 702 262 312 35 21 chr17 15382923 15383016 -79889635 + L1M4 LINE L1 5575 5668 -516 4 702 478 308 0 8 chr17 15383016 15383137 -79889514 + PB1D7 SINE Alu 1 120 0 4 702 262 312 35 21 chr17 15383137 15383187 -79889464 + L1M4 LINE L1 5669 5720 -464 4 702 1010 208 9 54 chr17 15384080 15384247 -79888404 - MTD LTR MaLR -203 216 59 4 702 1087 97 34 11 chr17 15384247 15384425 -79888226 + Lx3_Mus LINE L1 6828 7009 0 4 702 1010 208 9 54 chr17 15384425 15384481 -79888170 - MTD LTR MaLR -361 58 3 4 702 195 162 14 56 chr17 15385329 15385401 -79887250 + G-rich Low_complexity Low_complexity 1 69 0 4 702 273 264 11 32 chr17 15385405 15385499 -79887152 + GA-rich Low_complexity Low_complexity 3 94 0 4 702 414 0 0 0 chr17 15385780 15385826 -79886825 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 702 203 0 37 0 chr17 15386847 15386874 -79885777 + (CCA)n Simple_repeat Simple_repeat 3 30 0 4 702 754 221 83 0 chr17 15387364 15387545 -79885106 - B3A SINE B2 -1 197 2 4 702 280 234 52 0 chr17 15387700 15387777 -79884874 - MIR SINE MIR -66 196 116 4 702 243 0 0 0 chr17 15388933 15388960 -79883691 + (TC)n Simple_repeat Simple_repeat 2 28 0 4 702 374 175 0 12 chr17 15388960 15389041 -79883610 + (TA)n Simple_repeat Simple_repeat 2 81 0 4 702 309 51 0 0 chr17 15389567 15389606 -79883045 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 702 212 0 36 0 chr17 15391513 15391541 -79881110 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 4 702 789 229 93 9 chr17 15391852 15392062 -79880589 - MTD LTR MaLR 0 419 182 4 702 214 82 40 20 chr17 15392067 15392117 -79880534 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 4 702 1138 131 82 5 chr17 15392117 15392339 -79880312 - ORR1A2 LTR MaLR -13 314 77 4 702 1214 191 32 0 chr17 15392339 15392559 -79880092 - MTD LTR MaLR -185 234 8 4 702 501 141 0 0 chr17 15394192 15394277 -79878374 + (CA)n Simple_repeat Simple_repeat 1 85 0 4 702 1181 223 95 7 chr17 15395575 15395869 -79876782 - MTD LTR MaLR 0 419 100 4 702 290 249 40 61 chr17 15395881 15396018 -79876633 - MTD LTR MaLR -283 136 10 4 702 796 183 0 16 chr17 15397998 15398181 -79874470 + CT-rich Low_complexity Low_complexity 1 180 0 4 702 598 120 231 0 chr17 15398218 15398326 -79874325 - B1_Mus2 SINE Alu 0 147 15 5 702 180 0 0 0 chr17 15398328 15398348 -79874303 + (CCA)n Simple_repeat Simple_repeat 2 21 0 5 702 36 0 0 0 chr17 15398579 15398615 -79874036 + AT_rich Low_complexity Low_complexity 1 36 0 5 702 1768 33 5 0 chr17 15399537 15399749 -79872902 - L1Md_T LINE L1 -1 6581 6369 5 702 278 295 9 18 chr17 15400013 15400127 -79872524 - L1_Mur3 LINE L1 -2141 3739 3627 5 702 335 292 57 97 chr17 15400321 15400817 -79871834 - L1M5 LINE L1 -2701 3445 2970 5 702 200 143 24 0 chr17 15400829 15400871 -79871780 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 702 311 310 105 96 chr17 15401792 15402031 -79870620 + ORR1E LTR MaLR 59 299 -60 5 702 495 48 0 0 chr17 15402038 15402100 -79870551 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 5 702 261 0 0 0 chr17 15402158 15402187 -79870464 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 702 414 0 0 0 chr17 15402187 15402232 -79870419 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 702 420 269 21 0 chr17 15402239 15402332 -79870319 - RSINE1 SINE B4 -34 131 37 5 702 282 178 18 48 chr17 15402586 15402634 -79870017 + (TCTCTG)n Simple_repeat Simple_repeat 3 50 0 5 702 324 0 0 0 chr17 15402634 15402670 -79869981 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 702 282 218 10 27 chr17 15402670 15402884 -79869767 + (TCTCTG)n Simple_repeat Simple_repeat 1 210 0 5 702 423 0 0 0 chr17 15402888 15402935 -79869716 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 702 798 67 0 0 chr17 15404201 15404306 -79868345 + (TTC)n Simple_repeat Simple_repeat 2 106 0 5 702 441 213 36 18 chr17 15405877 15405987 -79866664 - MTEb LTR MaLR -6 373 262 5 702 310 381 12 12 chr17 15407934 15408104 -79864547 - L1M5 LINE L1 -354 5825 5656 5 702 8475 46 6 5 chr17 15408133 15409551 -79863100 + L1_Mus2 LINE L1 5144 6566 0 5 702 485 111 25 0 chr17 15409602 15409683 -79862968 + (GAAA)n Simple_repeat Simple_repeat 2 84 0 5 702 189 0 0 0 chr17 15409684 15409705 -79862946 + (CAAT)n Simple_repeat Simple_repeat 1 21 0 5 702 235 288 27 27 chr17 15409812 15409887 -79862764 - ID4 SINE ID -8 75 1 5 702 333 280 196 35 chr17 15409929 15410443 -79862208 - L1MEf LINE L1 -801 5743 5147 5 702 189 195 0 0 chr17 15410720 15410761 -79861890 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 702 262 215 111 25 chr17 15410780 15410861 -79861790 - MTEb LTR MaLR -6 373 286 5 702 607 277 75 89 chr17 15410861 15411222 -79861429 + ORR1E LTR MaLR 4 359 0 5 702 631 290 42 0 chr17 15411546 15411739 -79860912 - MTE-int LTR MaLR -27 1553 1353 5 702 3119 212 85 5 chr17 15411740 15412784 -79859867 + Lx6 LINE L1 6329 7455 -5 5 702 1307 316 116 17 chr17 15412818 15413361 -79859290 - MTE-int LTR MaLR -217 1363 767 5 702 445 224 157 19 chr17 15413422 15413581 -79859070 - L1MEf LINE L1 -4789 1851 1671 5 702 5407 29 5 0 chr17 15413595 15414216 -79858435 + L1Md_F3 LINE L1 5961 6584 0 5 702 7687 134 20 5 chr17 15414480 15415736 -79856915 + L1_Mur2 LINE L1 4001 5275 -602 5 702 226 342 0 13 chr17 15415764 15415841 -79856810 + MLT1E1 LTR MaLR 143 218 -406 5 702 253 385 55 17 chr17 15416409 15416600 -79856051 + MLT1E1 LTR MaLR 445 646 -8 5 702 661 299 75 16 chr17 15416842 15417293 -79855358 - L1MEf LINE L1 -5281 1359 884 5 702 1795 211 42 5 chr17 15418402 15418806 -79853845 + MTD LTR MaLR 1 419 0 5 702 267 31 0 0 chr17 15419116 15419148 -79853503 + (A)n Simple_repeat Simple_repeat 1 32 0 5 702 230 316 91 13 chr17 15419174 15419251 -79853400 - Arthur1B DNA Tip100 -1141 84 2 5 702 1336 189 156 107 chr17 15420443 15420828 -79851823 + MTD LTR MaLR 4 407 -12 5 702 316 213 80 36 chr17 15420954 15421066 -79851585 + Charlie26a DNA MER1_type 141 257 -68 5 702 524 307 20 7 chr17 15423907 15424058 -79848593 - B3A SINE B2 -44 154 2 5 702 189 107 0 0 chr17 15425027 15425055 -79847596 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 702 395 163 255 0 chr17 15427750 15427848 -79844803 + B1_Mur2 SINE Alu 14 136 -13 5 702 312 27 0 0 chr17 15427848 15427885 -79844766 + (CAAAA)n Simple_repeat Simple_repeat 1 37 0 5 702 549 248 103 22 chr17 15428034 15428170 -79844481 + B1_Mur1 SINE Alu 2 148 -1 5 702 519 267 127 30 chr17 15430631 15430797 -79841854 + ORR1D2 LTR MaLR 5 186 -184 5 702 285 331 50 50 chr17 15433857 15434038 -79838613 - MIRb SINE MIR -46 222 42 5 702 275 329 96 0 chr17 15434738 15434884 -79837767 - RLTR22_Mur LTR ERVK -385 1463 1304 5 702 1559 120 78 32 chr17 15434982 15435265 -79837386 + Lx LINE L1 6358 6653 -1 5 702 598 262 76 24 chr17 15435669 15435880 -79836771 + MLT1D LTR MaLR 250 471 -34 5 702 7867 33 0 1 chr17 15437721 15438669 -79833982 + MT-int LTR MaLR 57 1003 -95 5 702 772 261 14 39 chr17 15439848 15440055 -79832596 + ID_B1 SINE B4 23 224 0 5 702 2750 37 6 183 chr17 15440449 15440918 -79831733 - RLTR10 LTR ERVK -4 386 1 5 702 8913 20 3 3 chr17 15440920 15441915 -79830736 - RLTR10-int LTR ERVK -3 1984 990 5 702 576 330 15 15 chr17 15442063 15442389 -79830262 - RLTR10-int LTR ERVK -5479 1063 738 5 702 8090 34 8 1 chr17 15442446 15443390 -79829261 - RLTR10-int LTR ERVK -996 991 41 5 702 2750 37 6 183 chr17 15443406 15443875 -79828776 - RLTR10 LTR ERVK -4 386 1 5 702 348 252 86 17 chr17 15445026 15445076 -79827575 - MLT1C LTR MaLR -267 200 148 5 702 2689 116 34 5 chr17 15445076 15445484 -79827167 + MTC LTR MaLR 1 420 -1 5 702 348 252 86 17 chr17 15445484 15445550 -79827101 - MLT1C LTR MaLR -320 147 76 5 702 239 260 112 28 chr17 15445920 15446027 -79826624 - MLT1C LTR MaLR -240 227 112 5 702 297 0 0 0 chr17 15446423 15446456 -79826195 + (TCTG)n Simple_repeat Simple_repeat 3 35 0 5 702 683 227 19 25 chr17 15447560 15447718 -79824933 + ORR1D2 LTR MaLR 214 370 0 5 702 242 239 188 42 chr17 15448086 15448182 -79824469 - B1F1 SINE Alu 0 117 8 5 702 858 174 105 0 chr17 15448479 15448651 -79824000 + URR1A DNA MER1_type 37 226 0 5 702 202 286 18 0 chr17 15450119 15450175 -79822476 + CT-rich Low_complexity Low_complexity 6 62 0 5 702 623 245 8 21 chr17 15450180 15450325 -79822326 - ID_B1 SINE B4 -5 219 80 5 702 1056 90 28 0 chr17 15451220 15451364 -79821287 + B1_Mus1 SINE Alu 1 148 0 5 702 546 91 0 0 chr17 15451374 15451451 -79821200 + (GAAA)n Simple_repeat Simple_repeat 3 79 0 5 702 2668 123 8 8 chr17 15452118 15452510 -79820141 - ORR1B1 LTR MaLR -2 392 1 5 702 2211 219 68 20 chr17 15455978 15456136 -79816515 + MT2A LTR ERVL 6 159 -374 5 702 216 0 0 0 chr17 15456136 15456160 -79816491 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 702 2211 219 68 20 chr17 15456160 15456505 -79816146 + MT2A LTR ERVL 160 533 0 5 702 1373 173 146 49 chr17 15461027 15461342 -79811309 + Lx9 LINE L1 7176 7501 -143 5 702 447 68 0 0 chr17 15461342 15461401 -79811250 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 702 1373 173 146 49 chr17 15461401 15461511 -79811140 + Lx9 LINE L1 7502 7641 -3 5 702 208 219 0 30 chr17 15461803 15461869 -79810782 + A-rich Low_complexity Low_complexity 3 66 0 5 703 279 45 0 43 chr17 15467850 15467897 -79804754 + B2_Mm2 SINE B2 137 181 -14 5 703 25 0 0 0 chr17 15467897 15467922 -79804729 + AT_rich Low_complexity Low_complexity 1 25 0 5 703 240 240 70 88 chr17 15468401 15468515 -79804136 + RLTR23 LTR ERV1 22 133 -297 5 703 216 182 0 0 chr17 15469460 15469504 -79803147 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 703 298 330 59 34 chr17 15469560 15469679 -79802972 - RSINE1 SINE B4 -41 124 3 5 703 23 0 0 0 chr17 15469788 15469811 -79802840 + AT_rich Low_complexity Low_complexity 1 23 0 5 703 324 0 0 0 chr17 15472724 15472760 -79799891 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 5 703 181 273 68 0 chr17 15472977 15473021 -79799630 + MER5A DNA MER1_type 85 131 -58 5 703 373 232 9 57 chr17 15473161 15473266 -79799385 - RLTR42-int LTR ERVK -1147 4375 4276 5 703 297 125 17 35 chr17 15473525 15473583 -79799068 - RLTR42-int LTR ERVK -1283 4239 4183 5 703 321 217 0 0 chr17 15473791 15473851 -79798800 - RLTR42-int LTR ERVK -2588 2934 2875 5 703 29 28 0 0 chr17 15474060 15474096 -79798555 + AT_rich Low_complexity Low_complexity 1 36 0 5 703 24 0 0 0 chr17 15475354 15475378 -79797273 + AT_rich Low_complexity Low_complexity 1 24 0 5 703 32 0 0 0 chr17 15475412 15475444 -79797207 + AT_rich Low_complexity Low_complexity 1 32 0 5 703 198 103 0 0 chr17 15475575 15475604 -79797047 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 703 21 0 0 0 chr17 15475659 15475680 -79796971 + AT_rich Low_complexity Low_complexity 1 21 0 5 703 534 209 19 9 chr17 15475782 15475888 -79796763 - RLTR42-int LTR ERVK -3731 1791 1685 5 703 191 173 19 0 chr17 15476112 15476164 -79796487 + GA-rich Low_complexity Low_complexity 4 56 0 5 703 2611 68 6 0 chr17 15476385 15476710 -79795941 + ORR1A2 LTR MaLR 1 327 0 5 703 1224 124 21 0 chr17 15476991 15477145 -79795506 + B2_Mm2 SINE B2 6 159 -36 5 703 258 32 0 0 chr17 15477145 15477176 -79795475 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 5 703 1224 124 21 0 chr17 15477176 15477207 -79795444 + B2_Mm2 SINE B2 160 194 -1 5 703 209 220 68 0 chr17 15477359 15477418 -79795233 + CT-rich Low_complexity Low_complexity 5 67 0 5 703 330 259 24 12 chr17 15477493 15477575 -79795076 + MTEb LTR MaLR 290 372 -7 5 703 2421 89 9 0 chr17 15477583 15477907 -79794744 + ORR1A2 LTR MaLR 1 327 0 5 703 298 250 59 0 chr17 15478135 15478203 -79794448 + B1_Mur3 SINE Alu 1 72 -77 5 703 517 297 21 0 chr17 15479194 15479339 -79793312 + RSINE1 SINE B4 3 150 -15 5 703 23 86 0 0 chr17 15479359 15479417 -79793234 + AT_rich Low_complexity Low_complexity 1 58 0 5 703 2162 136 91 0 chr17 15481380 15481741 -79790910 + ORR1B1 LTR MaLR 1 394 0 5 703 6715 142 70 32 chr17 15483671 15485338 -79787313 + MYSERV16_I-int LTR ERVK 471 2325 -1 5 703 2117 206 21 32 chr17 15485340 15485927 -79786724 + RLTR20A LTR ERVK 6 534 0 5 703 856 248 19 5 chr17 15489445 15489652 -79782999 - B3 SINE B2 -6 210 1 5 703 487 275 41 8 chr17 15489679 15489800 -79782851 - ID_B1 SINE B4 -4 220 96 5 703 1208 142 98 0 chr17 15490485 15490690 -79781961 + URR1A DNA MER1_type 2 226 0 5 703 566 257 64 84 chr17 15490733 15491034 -79781617 - RLTR20B3 LTR ERVK -295 282 12 5 703 2083 158 43 35 chr17 15492571 15492946 -79779705 - ORR1C2 LTR MaLR 0 384 7 5 703 188 213 210 16 chr17 15493686 15493748 -79778903 + L2b LINE L2 3300 3373 -2 5 703 250 337 102 42 chr17 15494621 15494906 -79777745 - MLT1D LTR MaLR 0 505 204 6 703 957 203 54 5 chr17 15494927 15495130 -79777521 + RLTR28B LTR ERVL 1 213 -268 6 703 919 168 32 26 chr17 15495195 15495385 -79777266 + RLTR28B LTR ERVL 334 524 0 6 703 827 264 5 49 chr17 15495416 15495639 -79777012 + B3 SINE B2 4 216 0 6 703 276 185 0 0 chr17 15497072 15497126 -79775525 + (TA)n Simple_repeat Simple_repeat 1 54 0 6 703 214 192 198 37 chr17 15497190 15497271 -79775380 + PB1D10 SINE Alu 23 116 -1 6 703 223 225 14 14 chr17 15497271 15497343 -79775308 + GA-rich Low_complexity Low_complexity 1 72 0 6 703 1466 252 42 38 chr17 15498155 15498580 -79774071 - Lx9 LINE L1 -314 7330 6904 6 703 594 63 0 0 chr17 15498595 15498674 -79773977 + (TCC)n Simple_repeat Simple_repeat 3 81 0 6 703 207 162 0 0 chr17 15498677 15498714 -79773937 + T-rich Low_complexity Low_complexity 112 148 0 6 703 618 188 105 0 chr17 15498714 15498847 -79773804 - B1_Mur3 SINE Alu 0 149 3 6 703 249 312 0 38 chr17 15498925 15499005 -79773646 + polypyrimidine Low_complexity Low_complexity 4 80 0 6 703 871 62 0 0 chr17 15499091 15499204 -79773447 + B1_Mus2 SINE Alu 33 145 -2 6 703 268 43 21 21 chr17 15499204 15499251 -79773400 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 6 703 1311 80 34 0 chr17 15499411 15499586 -79773065 + B2_Mm2 SINE B2 1 181 -14 6 703 263 73 18 18 chr17 15499592 15499648 -79773003 + L1_Mus4 LINE L1 6579 6634 -2 6 703 458 331 100 59 chr17 15501319 15501740 -79770911 - L1MC5 LINE L1 -51 7910 7473 1 703 196 143 0 0 chr17 15503856 15503884 -79768767 + L2c LINE L2 3340 3367 -20 2 703 22 0 0 0 chr17 15504481 15504503 -79768148 + AT_rich Low_complexity Low_complexity 1 22 0 3 703 292 272 37 12 chr17 15506401 15506483 -79766168 - PB1D10 SINE Alu -13 104 21 4 703 205 333 113 36 chr17 15506493 15506661 -79765990 - MIRb SINE MIR -32 236 56 5 703 234 0 0 0 chr17 15508313 15508339 -79764312 + (TA)n Simple_repeat Simple_repeat 2 27 0 6 703 747 33 0 0 chr17 15508453 15508543 -79764108 + (GAA)n Simple_repeat Simple_repeat 3 92 0 7 703 321 164 0 0 chr17 15510953 15511026 -79761625 + GA-rich Low_complexity Low_complexity 1 73 0 8 703 24 53 0 0 chr17 15511947 15511985 -79760666 + GC_rich Low_complexity Low_complexity 1 38 0 9 703 263 303 0 0 chr17 15513108 15513184 -79759467 + C-rich Low_complexity Low_complexity 1 76 0 1 703 213 94 0 0 chr17 15514218 15514250 -79758401 + (T)n Simple_repeat Simple_repeat 1 32 0 1 703 222 156 0 0 chr17 15515658 15515703 -79756948 + CT-rich Low_complexity Low_complexity 3 47 0 1 703 420 20 0 0 chr17 15516885 15516934 -79755717 + (GGA)n Simple_repeat Simple_repeat 1 49 0 1 703 383 255 10 21 chr17 15517133 15517229 -79755422 - PB1D10 SINE Alu -21 96 2 1 703 290 255 131 10 chr17 15520119 15520140 -79752511 - L1M3 LINE L1 -2507 3633 3604 1 703 306 106 0 0 chr17 15520140 15520187 -79752464 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 703 447 280 136 11 chr17 15520187 15520378 -79752273 - L1M5 LINE L1 -2537 3609 3395 1 703 875 246 41 0 chr17 15520395 15520590 -79752061 + B3 SINE B2 1 203 -13 1 703 242 315 139 7 chr17 15520904 15521048 -79751603 - MLT1L LTR MaLR -12 598 436 1 703 707 220 15 0 chr17 15521166 15521298 -79751353 - B1_Mur3 SINE Alu -15 134 1 2 703 1245 180 75 24 chr17 15521516 15521909 -79750742 - Lx4B LINE L1 0 7000 6572 2 703 1332 85 11 0 chr17 15522043 15522219 -79750432 + B2_Mm1t SINE B2 2 179 -14 2 703 365 72 18 22 chr17 15522266 15522331 -79750320 + B2_Mm2 SINE B2 47 109 -107 2 703 180 0 0 0 chr17 15522346 15522366 -79750285 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2 703 387 316 124 79 chr17 15522611 15522752 -79749899 - HAL1 LINE L1 -940 1567 1434 2 703 310 294 27 9 chr17 15522752 15522862 -79749789 - PB1D9 SINE Alu -4 116 5 2 703 387 316 124 79 chr17 15522862 15523212 -79749439 - HAL1 LINE L1 -1074 1433 1054 2 703 348 152 0 33 chr17 15523212 15523273 -79749378 + B1_Mur4 SINE Alu 2 60 -90 2 703 507 131 87 39 chr17 15523367 15523470 -79749181 + B1_Mur4 SINE Alu 43 150 0 2 703 1122 57 0 35 chr17 15524772 15524917 -79747734 + B1_Mus1 SINE Alu 1 140 -8 2 703 342 0 0 0 chr17 15524917 15524955 -79747696 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2 703 656 195 0 9 chr17 15525175 15525279 -79747372 - MTD LTR MaLR 0 419 317 3 703 3145 155 155 18 chr17 15525279 15525897 -79746754 + RMER6D LTR ERVK 1 703 -17 3 703 938 279 124 29 chr17 15525863 15526169 -79746482 - MTD LTR MaLR -80 339 5 3 703 2250 226 60 31 chr17 15526173 15526805 -79745846 - MTD-int LTR MaLR -681 1282 639 3 703 24 32 0 0 chr17 15526849 15526880 -79745771 + AT_rich Low_complexity Low_complexity 1 31 0 3 703 24 32 0 0 chr17 15527272 15527303 -79745348 + AT_rich Low_complexity Low_complexity 1 31 0 3 703 15099 65 17 4 chr17 15527464 15530112 -79742539 - L1VL2 LINE L1 -632 2983 300 3 703 534 110 0 0 chr17 15530112 15530185 -79742466 - L1VL2 LINE L1 -6148 187 115 3 703 243 220 81 81 chr17 15530185 15530284 -79742367 - RLTR13B3 LTR ERVK -632 297 199 3 703 1092 240 49 15 chr17 15530234 15530501 -79742150 - MTD-int LTR MaLR -740 518 243 3 703 811 261 39 20 chr17 15530501 15530704 -79741947 - B3 SINE B2 -4 212 6 3 703 969 177 115 65 chr17 15530681 15530941 -79741710 - MTD-int LTR MaLR -966 292 20 3 703 1617 196 78 7 chr17 15530956 15531312 -79741339 - MTD LTR MaLR -8 413 1 3 703 765 198 91 29 chr17 15531388 15531596 -79741055 + ORR1D1 LTR MaLR 3 223 -151 3 703 207 0 0 0 chr17 15534925 15534948 -79737703 + (ATTG)n Simple_repeat Simple_repeat 4 26 0 3 703 297 318 15 51 chr17 15535024 15535246 -79737405 - RMER15 LTR ERVL -44 531 275 3 703 219 146 0 0 chr17 15536716 15536757 -79735894 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 703 22 0 0 0 chr17 15536898 15536920 -79735731 + AT_rich Low_complexity Low_complexity 1 22 0 4 703 279 79 0 0 chr17 15537806 15537844 -79734807 + (TTA)n Simple_repeat Simple_repeat 2 39 0 4 703 505 225 155 0 chr17 15537986 15538115 -79734536 + B1_Mur2 SINE Alu 1 149 0 4 703 547 365 7 0 chr17 15538232 15538377 -79734274 + RSINE1 SINE B4 4 149 -16 4 703 221 268 24 0 chr17 15540595 15540664 -79731987 - MIRc SINE MIR -43 225 153 4 703 761 135 18 0 chr17 15540847 15540958 -79731693 + B3 SINE B2 1 113 -103 4 703 248 0 31 0 chr17 15541110 15541142 -79731509 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 4 703 971 134 0 39 chr17 15541142 15541288 -79731363 - B1_Mur4 SINE Alu -9 141 1 4 703 873 211 117 4 chr17 15541297 15541545 -79731106 + Lx9 LINE L1 7362 7637 -7 4 703 1189 56 106 0 chr17 15543050 15543210 -79729441 + B2_Mm1t SINE B2 3 179 -14 5 703 320 145 0 40 chr17 15543260 15543327 -79729324 + B2_Mm2 SINE B2 47 109 -107 5 703 30 0 0 0 chr17 15543345 15543375 -79729276 + AT_rich Low_complexity Low_complexity 1 30 0 5 703 480 191 0 0 chr17 15543391 15543475 -79729176 + B1_Mur2 SINE Alu 59 142 -7 5 703 1082 207 24 5 chr17 15544054 15544263 -79728388 - B3 SINE B2 -2 214 2 5 703 1646 136 56 132 chr17 15544748 15545104 -79727547 - ORR1A4 LTR MaLR 0 329 1 5 703 772 323 0 39 chr17 15545196 15545428 -79727223 - B4A SINE B4 -34 258 36 5 703 231 94 0 0 chr17 15545749 15545781 -79726870 + U3 snRNA snRNA 1 32 -185 5 703 204 97 0 0 chr17 15545813 15545844 -79726807 + (A)n Simple_repeat Simple_repeat 1 31 0 5 703 287 280 79 10 chr17 15545928 15546029 -79726622 + PB1D10 SINE Alu 1 108 -9 5 703 365 280 220 11 chr17 15546253 15546444 -79726207 + MLT1A0 LTR MaLR 134 364 -1 6 703 355 61 0 0 chr17 15547282 15547331 -79725320 - B1_Mm SINE Alu 0 147 99 6 703 603 264 104 27 chr17 15547347 15547530 -79725121 + B3A SINE B2 1 197 -1 6 703 195 189 27 0 chr17 15547658 15547695 -79724956 - MER5A DNA MER1_type -2 187 150 6 703 184 296 79 50 chr17 15548336 15548475 -79724176 + L2b LINE L2 3224 3366 -9 6 703 355 321 49 35 chr17 15548493 15548635 -79724016 + ORR1E LTR MaLR 1 144 -215 6 703 241 256 103 11 chr17 15548691 15548778 -79723873 + ORR1E LTR MaLR 229 323 -36 6 703 702 196 20 20 chr17 15549346 15549492 -79723159 - B1_Mur2 SINE Alu 0 149 4 6 703 273 200 62 0 chr17 15549651 15549716 -79722935 - ID4 SINE ID -10 73 5 6 703 500 349 48 19 chr17 15550228 15550497 -79722154 - MER58B DNA MER1_type -5 336 60 6 703 396 0 0 0 chr17 15551407 15551451 -79721200 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 703 679 177 7 104 chr17 15552128 15552286 -79720365 - B3 SINE B2 -5 211 62 7 703 1132 275 57 28 chr17 15552313 15552665 -79719986 - MTEb LTR MaLR -8 371 10 7 703 1013 80 66 0 chr17 15552708 15552845 -79719806 + B1_Mus2 SINE Alu 2 147 0 7 703 1394 240 69 10 chr17 15553382 15553774 -79718877 + MTD LTR MaLR 1 415 -4 7 703 544 230 99 44 chr17 15553783 15553952 -79718699 - MTEa LTR MaLR -4 375 216 7 703 420 229 12 0 chr17 15553922 15554005 -79718646 - MTEa LTR MaLR -293 86 3 7 703 372 22 0 0 chr17 15554459 15554504 -79718147 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 703 230 307 42 14 chr17 15555436 15555578 -79717073 - L1_Mur3 LINE L1 -6880 832 687 7 703 517 128 202 0 chr17 15557754 15557863 -79714788 + B1_Mur2 SINE Alu 2 132 -17 7 703 21 0 0 0 chr17 15557892 15557913 -79714738 + AT_rich Low_complexity Low_complexity 1 21 0 7 703 271 286 35 119 chr17 15558228 15558244 -79714407 - B4 SINE B4 -65 227 97 7 703 410 278 0 8 chr17 15558244 15558371 -79714280 - B1F SINE Alu -12 137 12 8 703 841 189 143 21 chr17 15558787 15558976 -79713675 - B3 SINE B2 0 216 5 8 703 1198 180 15 52 chr17 15559279 15559548 -79713103 - ORR1D1 LTR MaLR -115 259 1 8 703 263 225 123 16 chr17 15561669 15561791 -79710860 + Lx9 LINE L1 7502 7636 -8 8 703 28 48 0 0 chr17 15563644 15563686 -79708965 + AT_rich Low_complexity Low_complexity 1 42 0 8 703 22 0 0 0 chr17 15566894 15566916 -79705735 + GC_rich Low_complexity Low_complexity 1 22 0 8 703 362 213 0 0 chr17 15567928 15568003 -79704648 - PB1D9 SINE Alu -10 110 36 8 703 1211 189 184 46 chr17 15569027 15569354 -79703297 - ORR1D1 LTR MaLR 0 374 3 8 703 827 176 83 21 chr17 15569528 15569720 -79702931 + B3 SINE B2 7 210 -6 8 703 25 31 0 0 chr17 15569724 15569756 -79702895 + AT_rich Low_complexity Low_complexity 1 32 0 8 703 814 103 34 0 chr17 15571484 15571601 -79701050 + B3 SINE B2 2 122 -94 9 703 351 0 0 0 chr17 15571601 15571640 -79701011 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 703 435 195 20 27 chr17 15572047 15572180 -79700471 + B3 SINE B2 1 213 -3 9 703 1158 68 0 0 chr17 15572299 15572446 -79700205 + B1_Mus1 SINE Alu 2 148 0 9 703 1123 80 37 0 chr17 15572526 15572689 -79699962 + B2_Mm1t SINE B2 11 179 -14 9 703 339 114 402 19 chr17 15572739 15572846 -79699805 + B2_Mm2 SINE B2 47 194 -1 9 703 320 283 225 28 chr17 15572846 15573072 -79699579 + L1M4c LINE L1 748 1009 -5375 9 703 308 24 24 0 chr17 15573072 15573113 -79699538 + (TA)n Simple_repeat Simple_repeat 2 43 0 9 703 320 283 225 28 chr17 15573113 15573286 -79699365 + L1M4c LINE L1 1010 1226 -5158 9 703 721 223 101 3 chr17 15573289 15573574 -79699077 - ORR1D2 LTR MaLR -2 368 3 9 703 1207 55 14 0 chr17 15573696 15573842 -79698809 + B1_Mus1 SINE Alu 1 148 0 9 703 207 0 0 0 chr17 15573857 15573880 -79698771 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 703 302 295 70 0 chr17 15573926 15574055 -79698596 + L1M4c LINE L1 1463 1600 -4784 9 703 268 254 129 48 chr17 15574076 15574200 -79698451 + B3 SINE B2 69 202 -14 1 703 379 296 8 50 chr17 15574203 15574363 -79698288 + L1M4c LINE L1 1594 1843 -4635 9 703 230 294 58 19 chr17 15574364 15574468 -79698183 + RSINE1 SINE B4 3 110 -55 1 703 309 26 0 0 chr17 15574486 15574524 -79698127 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 703 402 252 62 8 chr17 15574606 15574734 -79697917 + L1M4c LINE L1 1769 1903 -4481 9 703 395 266 32 0 chr17 15574781 15574905 -79697746 + L1M4c LINE L1 2138 2265 -4119 9 703 3520 23 2 0 chr17 15574949 15575342 -79697309 - MTA_Mm LTR MaLR 0 396 3 1 703 263 216 118 26 chr17 15575385 15575461 -79697190 - PB1D7 SINE Alu -35 85 3 1 703 382 238 48 0 chr17 15575499 15575583 -79697068 - B3 SINE B2 -25 191 104 1 703 1252 75 0 6 chr17 15575628 15575802 -79696849 - B2_Mm2 SINE B2 -21 174 2 1 703 223 238 0 0 chr17 15575806 15575848 -79696803 - B3 SINE B2 -118 98 57 1 703 440 297 22 7 chr17 15575856 15575995 -79696656 + B1F SINE Alu 2 142 -7 1 703 233 236 55 0 chr17 15576006 15576061 -79696590 + ID4_ SINE ID 18 75 -8 1 703 1544 183 185 17 chr17 15576365 15576721 -79695930 + MTC LTR MaLR 2 417 -4 1 703 296 263 51 31 chr17 15579312 15579410 -79693241 + ID_B1 SINE B4 124 223 -1 1 703 252 0 0 0 chr17 15579782 15579810 -79692841 + (CTG)n Simple_repeat Simple_repeat 2 29 0 1 703 286 221 0 69 chr17 15582937 15583068 -79689583 - RMER17C LTR ERVK -110 300 179 1 703 773 21 0 10 chr17 15583070 15583166 -79689485 + (GAGAA)n Simple_repeat Simple_repeat 5 99 0 1 703 843 10 0 0 chr17 15584587 15584683 -79687968 + (TTC)n Simple_repeat Simple_repeat 2 97 0 1 703 1237 41 0 0 chr17 15584686 15584832 -79687819 - B1_Mus1 SINE Alu -2 146 1 1 703 706 213 44 57 chr17 15585061 15585583 -79687068 + RMER17C LTR ERVK 3 410 0 1 703 1159 83 0 0 chr17 15585835 15585980 -79686671 + B1_Mm SINE Alu 2 146 -1 1 703 198 150 0 0 chr17 15585981 15586021 -79686630 + (A)n Simple_repeat Simple_repeat 1 40 0 1 703 189 0 0 0 chr17 15586066 15586087 -79686564 + (A)n Simple_repeat Simple_repeat 1 21 0 1 703 1181 61 7 0 chr17 15586111 15586258 -79686393 + B1_Mus1 SINE Alu 1 148 0 1 703 279 133 0 0 chr17 15586258 15586303 -79686348 + (A)n Simple_repeat Simple_repeat 1 45 0 1 703 221 174 0 21 chr17 15587270 15587317 -79685334 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 703 516 298 19 32 chr17 15587319 15587475 -79685176 - RSINE1 SINE B4 0 165 12 1 703 21 36 0 0 chr17 15587483 15587511 -79685140 + AT_rich Low_complexity Low_complexity 1 28 0 1 703 2423 297 42 23 chr17 15587599 15588384 -79684267 - RMER15-int LTR ERVL -2213 2786 1987 1 703 394 224 43 134 chr17 15588711 15588819 -79683832 - RMER17C LTR ERVK -243 167 98 1 703 297 0 0 0 chr17 15588819 15588852 -79683799 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 703 441 0 0 0 chr17 15588860 15588909 -79683742 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 703 394 262 41 59 chr17 15588909 15588991 -79683660 - RMER17C LTR ERVK -321 89 4 1 703 335 277 11 0 chr17 15591636 15591730 -79680921 + MLT1B LTR MaLR 279 373 -17 1 703 180 0 0 0 chr17 15592027 15592047 -79680604 + (CTCTG)n Simple_repeat Simple_repeat 2 21 0 1 703 1016 120 6 0 chr17 15592505 15592663 -79679988 + B2_Mm1t SINE B2 16 174 -19 1 703 1222 201 110 0 chr17 15593126 15593399 -79679252 + ORR1C1 LTR MaLR 1 303 -75 1 703 274 54 0 0 chr17 15593630 15593667 -79678984 + ORR1C1 LTR MaLR 340 376 -2 1 703 4597 214 71 21 chr17 15593669 15594808 -79677843 + ORR1C1-int LTR MaLR 1 1196 -174 1 703 426 20 0 0 chr17 15594811 15594862 -79677789 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 703 273 221 4 0 chr17 15595879 15595947 -79676704 - RLTR4_MM-int LTR ERV1 -2479 5122 5074 1 703 413 304 39 49 chr17 15596383 15596587 -79676064 - RLTR14-int LTR ERV1 -2698 2619 2418 1 87 2342 159 19 31 chr17 15597237 15597658 -79674993 - MTC LTR MaLR 0 421 6 1 704 453 281 17 9 chr17 15597814 15597929 -79674722 - PB1D7 SINE Alu 0 120 5 1 704 397 217 0 137 chr17 15598102 15598138 -79674513 + MT2B LTR ERVL 138 154 -447 1 704 836 62 0 0 chr17 15598138 15598250 -79674401 + B1_Mus1 SINE Alu 1 112 -36 1 704 735 44 0 0 chr17 15598257 15598348 -79674303 + (GGA)n Simple_repeat Simple_repeat 3 93 0 1 704 272 120 0 20 chr17 15598348 15598399 -79674252 + (GAAAA)n Simple_repeat Simple_repeat 2 51 0 1 704 702 237 11 45 chr17 15599455 15599622 -79673029 - MTE2a LTR MaLR -5 374 214 1 704 376 227 74 25 chr17 15599622 15599744 -79672907 + RSINE1 SINE B4 3 130 -35 1 704 315 306 41 42 chr17 15599840 15600042 -79672609 - MTE2a LTR MaLR -216 205 3 1 704 373 345 19 39 chr17 15600057 15600211 -79672440 + B3 SINE B2 9 159 -57 1 704 597 294 7 0 chr17 15600241 15600387 -79672264 + RSINE1 SINE B4 3 149 -16 1 704 758 235 49 24 chr17 15600828 15601033 -79671618 + B3 SINE B2 1 210 -6 1 704 1615 21 5 11 chr17 15601302 15601490 -79671161 + B2_Mm1t SINE B2 2 188 -5 1 704 251 213 0 16 chr17 15601511 15601573 -79671078 + G-rich Low_complexity Low_complexity 5 65 0 1 704 425 236 58 32 chr17 15601618 15601806 -79670845 + L1MC5 LINE L1 7609 7801 -160 1 704 23 0 0 0 chr17 15602159 15602182 -79670469 + AT_rich Low_complexity Low_complexity 1 23 0 1 704 1404 95 5 0 chr17 15602245 15602435 -79670216 - B2_Mm1t SINE B2 -2 191 1 1 704 1355 240 91 67 chr17 15602741 15602915 -79669736 - MT2A LTR ERVL -2 531 361 1 704 222 37 0 0 chr17 15602915 15602942 -79669709 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 704 1355 240 91 67 chr17 15602942 15603286 -79669365 - MT2A LTR ERVL -173 360 1 1 704 1162 201 4 34 chr17 15603286 15603554 -79669097 - MERVL_2A-int LTR ERVL 0 5761 5502 1 704 1197 64 124 28 chr17 15603554 15603731 -79668920 + B2_Mm2 SINE B2 2 195 0 1 704 258 160 20 0 chr17 15603773 15603823 -79668828 - MERVL_2A-int LTR ERVL -269 5492 5442 1 704 26 0 0 0 chr17 15604327 15604353 -79668298 + AT_rich Low_complexity Low_complexity 1 26 0 1 704 511 208 56 40 chr17 15604361 15604486 -79668165 + B1F2 SINE Alu 5 131 -18 1 704 2330 268 115 43 chr17 15605138 15606521 -79666130 + L1_Mur3 LINE L1 2950 4547 -1330 1 704 2010 189 18 70 chr17 15606521 15606647 -79666004 + MTC LTR MaLR 1 108 -313 1 704 1165 97 42 36 chr17 15606647 15606839 -79665812 - B2_Mm2 SINE B2 -1 194 2 1 704 2010 189 18 70 chr17 15606839 15607156 -79665495 + MTC LTR MaLR 109 421 0 1 704 2019 274 179 45 chr17 15607156 15607480 -79665171 + L1_Mur3 LINE L1 4548 4885 -992 1 704 596 251 128 6 chr17 15607573 15607753 -79664898 + B3 SINE B2 11 212 -4 1 704 387 273 89 20 chr17 15607777 15607979 -79664672 + L1_Rod LINE L1 5006 5221 -626 1 704 1713 175 229 39 chr17 15607981 15608444 -79664207 - RMER15 LTR ERVL -23 552 2 1 704 392 303 54 18 chr17 15608444 15608550 -79664101 + RSINE1 SINE B4 56 165 0 1 704 811 238 27 67 chr17 15608574 15608799 -79663852 - B3 SINE B2 0 216 1 1 704 985 259 119 45 chr17 15608831 15609225 -79663426 - MTD LTR MaLR 0 407 6 1 704 241 227 45 0 chr17 15609194 15609260 -79663391 - MTD-int LTR MaLR -5 1253 1185 1 704 460 239 209 0 chr17 15609327 15609461 -79663190 + B3A SINE B2 10 171 -27 1 704 1176 49 7 0 chr17 15609532 15609676 -79662975 + B1_Mus2 SINE Alu 2 146 -1 1 704 207 0 0 0 chr17 15609681 15609704 -79662947 + (CAAAAA)n Simple_repeat Simple_repeat 4 26 0 1 704 1243 97 45 0 chr17 15609717 15609893 -79662758 + B2_Mm2 SINE B2 3 186 -9 1 704 667 282 121 80 chr17 15609896 15609927 -79662724 - MTD-int LTR MaLR -182 1076 1040 1 704 901 179 0 0 chr17 15609927 15610067 -79662584 + B1_Mur1 SINE Alu 2 141 -8 1 704 1536 247 86 76 chr17 15610067 15610978 -79661673 - MTD-int LTR MaLR -320 1260 1 1 704 464 279 106 160 chr17 15611019 15611195 -79661456 - MTD LTR MaLR -59 360 204 1 704 449 249 165 62 chr17 15611195 15611371 -79661280 - B3A SINE B2 -4 194 1 1 704 464 279 106 160 chr17 15611371 15611544 -79661107 - MTD LTR MaLR -216 203 30 1 704 239 0 32 0 chr17 15611551 15611582 -79661069 + (CAAAA)n Simple_repeat Simple_repeat 5 36 0 1 704 761 249 107 84 chr17 15611590 15611741 -79660910 + L1_Mur3 LINE L1 5295 5437 -443 1 704 742 176 27 47 chr17 15611741 15611890 -79660761 + B1_Mur4 SINE Alu 5 150 0 1 704 700 259 84 60 chr17 15611890 15612120 -79660531 + L1_Mur3 LINE L1 5449 5685 -195 1 704 204 40 0 0 chr17 15612257 15612282 -79660369 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 704 360 277 0 0 chr17 15612328 15612411 -79660240 - RSINE1 SINE B4 -81 84 2 1 704 522 240 174 12 chr17 15612442 15612640 -79660011 + B3A SINE B2 2 216 0 1 704 567 218 165 29 chr17 15612692 15612862 -79659789 - B3A SINE B2 -5 193 1 1 704 1064 198 220 10 chr17 15613475 15613766 -79658885 + MTD LTR MaLR 66 417 -2 1 704 2097 157 81 5 chr17 15614863 15615248 -79657403 + MTC LTR MaLR 8 421 0 1 704 32 0 0 0 chr17 15615349 15615381 -79657270 + AT_rich Low_complexity Low_complexity 1 32 0 1 704 432 292 97 38 chr17 15615487 15615672 -79656979 - B3A SINE B2 -1 197 2 1 704 481 317 0 40 chr17 15616297 15616448 -79656203 + RSINE1 SINE B4 6 150 -15 1 704 2931 44 3 0 chr17 15616519 15616863 -79655788 + ORR1A1 LTR MaLR 2 346 0 1 704 610 224 95 32 chr17 15616938 15617127 -79655524 - B3 SINE B2 -15 201 1 1 704 356 190 13 0 chr17 15617169 15617248 -79655403 + GA-rich Low_complexity Low_complexity 3 82 0 1 704 927 109 0 0 chr17 15617248 15617386 -79655265 + (GAAAA)n Simple_repeat Simple_repeat 4 141 0 1 704 1179 55 7 0 chr17 15617386 15617532 -79655119 + B1_Mus1 SINE Alu 2 148 0 1 704 180 0 0 0 chr17 15617537 15617557 -79655094 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 704 224 127 18 0 chr17 15617643 15617698 -79654953 + (CAAA)n Simple_repeat Simple_repeat 2 57 0 1 704 374 202 35 14 chr17 15618027 15618128 -79654523 - B1_Mus2 SINE Alu 0 149 44 1 704 2466 86 28 8 chr17 15618226 15618613 -79654038 + RMER2 LTR ERV1 131 525 -42 1 704 975 107 12 6 chr17 15618620 15618766 -79653885 + B2_Mm1a SINE B2 14 160 -33 1 704 273 57 0 0 chr17 15618766 15618801 -79653850 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 1 704 975 107 12 6 chr17 15618801 15618814 -79653837 + B2_Mm1a SINE B2 161 173 -20 1 704 314 100 0 0 chr17 15618812 15618862 -79653789 + RMER2 LTR ERV1 514 563 -4 1 704 244 228 242 8 chr17 15618865 15618989 -79653662 + L1_Rod LINE L1 1687 1839 -4008 1 704 3127 120 221 11 chr17 15619526 15620149 -79652502 + RMER6A LTR ERVK 3 756 0 1 704 1111 75 149 0 chr17 15620430 15620591 -79652060 + B2_Mm2 SINE B2 4 188 -7 1 704 347 204 173 92 chr17 15621020 15621193 -79651458 + B3A SINE B2 2 188 -10 1 704 230 81 0 26 chr17 15621213 15621251 -79651400 + (TTTC)n Simple_repeat Simple_repeat 4 40 0 2 704 848 68 0 0 chr17 15621265 15621382 -79651269 - B2_Mm2 SINE B2 -78 117 1 2 704 1441 46 6 0 chr17 15621420 15621594 -79651057 - B2_Mm1t SINE B2 -18 175 1 2 704 879 266 107 25 chr17 15621649 15622050 -79650601 + Lx8 LINE L1 7040 7473 0 2 704 654 216 72 0 chr17 15622104 15622243 -79650408 - B1F2 SINE Alu 0 149 1 2 704 1115 200 234 30 chr17 15622505 15622876 -79649775 + RMER15 LTR ERVL 1 447 -128 2 704 240 114 0 0 chr17 15622886 15622930 -79649721 + RMER15 LTR ERVL 406 449 -126 2 704 240 114 0 0 chr17 15624557 15624601 -79648050 + RMER15 LTR ERVL 406 449 -126 2 704 240 114 0 0 chr17 15625196 15625240 -79647411 + RMER15 LTR ERVL 406 449 -126 2 704 240 114 0 0 chr17 15625646 15625690 -79646961 + RMER15 LTR ERVL 406 449 -126 2 704 247 95 0 0 chr17 15626200 15626242 -79646409 + RMER15 LTR ERVL 406 447 -128 2 704 467 139 168 0 chr17 15626330 15626431 -79646220 + RMER15 LTR ERVL 406 523 -52 2 704 632 226 26 104 chr17 15626431 15626624 -79646027 - B3 SINE B2 -38 178 1 2 704 861 175 206 17 chr17 15626652 15626832 -79645819 + B3 SINE B2 1 214 -2 2 704 267 287 65 8 chr17 15627663 15627786 -79644865 + RMER15 LTR ERVL 345 474 -101 2 704 391 176 27 0 chr17 15627842 15627916 -79644735 + B1_Mur2 SINE Alu 66 141 -8 2 704 250 340 82 9 chr17 15628170 15628280 -79644371 + MER58B DNA MER1_type 219 336 -5 2 704 482 272 98 16 chr17 15628370 15628564 -79644087 + B3 SINE B2 1 210 -6 2 704 647 148 39 84 chr17 15628636 15628783 -79643868 - B1_Mur4 SINE Alu -2 148 7 2 704 1938 69 97 26 chr17 15628811 15629080 -79643571 - L1_Mus1 LINE L1 -2 6565 6278 2 704 1584 91 5 0 chr17 15629080 15629301 -79643350 + L1_Mus1 LINE L1 5898 6119 -448 2 704 355 267 11 90 chr17 15630654 15630831 -79641820 + RNLTR23 LTR ERVK 480 642 0 2 704 479 158 0 50 chr17 15631220 15631300 -79641351 + B3 SINE B2 2 77 -139 2 704 445 216 57 0 chr17 15632154 15632242 -79640409 + PB1D9 SINE Alu 18 110 -10 2 704 494 303 44 26 chr17 15632248 15632475 -79640176 + RMER15 LTR ERVL 250 480 -95 2 704 183 129 0 0 chr17 15632539 15632570 -79640081 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 704 212 298 166 28 chr17 15632919 15633106 -79639545 + MIR SINE MIR 49 262 0 2 704 219 36 0 0 chr17 15634178 15634206 -79638445 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 704 755 161 88 0 chr17 15634363 15634500 -79638151 - B1_Mur4 SINE Alu -1 149 1 2 704 766 264 114 0 chr17 15635653 15635880 -79636771 + MTEa LTR MaLR 1 253 -126 2 704 200 170 18 36 chr17 15636087 15636142 -79636509 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 704 195 42 0 0 chr17 15636142 15636166 -79636485 + (GA)n Simple_repeat Simple_repeat 2 25 0 2 704 528 137 21 0 chr17 15636539 15636634 -79636017 + B1_Mur4 SINE Alu 53 149 -1 2 704 237 158 0 0 chr17 15636642 15636680 -79635971 + ID4 SINE ID 3 40 -43 2 704 947 229 20 10 chr17 15638207 15638410 -79634241 - B3 SINE B2 -11 205 1 2 704 216 0 0 0 chr17 15638524 15638548 -79634103 + (T)n Simple_repeat Simple_repeat 1 24 0 2 704 297 178 40 14 chr17 15639053 15639127 -79633524 + B3 SINE B2 4 79 -137 2 704 215 31 0 30 chr17 15639141 15639174 -79633477 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2 704 990 62 47 0 chr17 15639174 15639303 -79633348 - B1_Mus1 SINE Alu -13 135 1 2 704 507 247 106 7 chr17 15639380 15639531 -79633120 + B3 SINE B2 45 210 -6 2 704 299 302 102 20 chr17 15639554 15639652 -79632999 - RSINE1 SINE B4 -57 108 3 2 704 35 24 0 0 chr17 15640541 15640583 -79632068 + AT_rich Low_complexity Low_complexity 1 42 0 2 704 713 185 54 0 chr17 15640805 15640935 -79631716 - B1_Mur3 SINE Alu -10 139 3 2 704 323 121 0 17 chr17 15641354 15641413 -79631238 + (CAG)n Simple_repeat Simple_repeat 1 58 0 2 704 32 26 0 0 chr17 15642721 15642760 -79629891 + AT_rich Low_complexity Low_complexity 1 39 0 2 704 28 0 0 0 chr17 15643024 15643052 -79629599 + AT_rich Low_complexity Low_complexity 1 28 0 2 704 268 281 28 37 chr17 15643056 15643163 -79629488 - B1F1 SINE Alu -4 145 40 2 704 452 246 29 15 chr17 15643277 15643413 -79629238 + Looper DNA PiggyBac 1282 1419 -139 2 704 853 176 0 26 chr17 15643414 15643566 -79629085 + B1_Mur4 SINE Alu 2 149 -1 2 704 21 0 0 0 chr17 15643722 15643743 -79628908 + AT_rich Low_complexity Low_complexity 1 21 0 2 704 888 62 147 0 chr17 15643754 15643883 -79628768 - B1_Mus1 SINE Alu 0 148 1 2 704 225 304 12 71 chr17 15644585 15644670 -79627981 - ID4_ SINE ID -2 81 2 2 704 2009 119 66 0 chr17 15644981 15645283 -79627368 - ORR1A2 LTR MaLR -4 323 2 2 704 10683 129 84 11 chr17 15645284 15647113 -79625538 - ORR1A2-int LTR MaLR 0 1963 1 2 704 1572 110 49 135 chr17 15647117 15647465 -79625186 - ORR1A2 LTR MaLR -8 319 2 2 704 1449 212 99 14 chr17 15647590 15647944 -79624707 - ORR1C2 LTR MaLR 0 384 1 2 704 216 158 0 0 chr17 15648024 15648062 -79624589 + T-rich Low_complexity Low_complexity 1 38 0 2 704 453 50 0 0 chr17 15649151 15649211 -79623440 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 704 415 288 104 26 chr17 15649700 15650041 -79622610 - L1_Rod LINE L1 -3481 2366 2008 2 704 1741 16 0 0 chr17 15653164 15653356 -79619295 - B2_Mm1a SINE B2 0 193 2 2 704 445 194 117 0 chr17 15653414 15653517 -79619134 + PB1D9 SINE Alu 1 115 -5 2 704 208 171 0 0 chr17 15654570 15654605 -79618046 - MIRc SINE MIR -165 103 69 2 704 1391 65 49 0 chr17 15655543 15655727 -79616924 - B2_Mm2 SINE B2 -1 194 2 2 704 307 204 37 131 chr17 15655882 15655989 -79616662 - PB1D10 SINE Alu 0 117 21 2 704 555 212 366 16 chr17 15656178 15656483 -79616168 - MTD LTR MaLR -8 411 1 2 704 715 233 16 59 chr17 15657644 15657825 -79614826 - B3A SINE B2 -6 192 20 2 704 578 279 85 10 chr17 15657825 15658024 -79614627 + B3 SINE B2 2 215 -1 2 704 255 241 69 0 chr17 15658243 15658301 -79614350 + RSINE1 SINE B4 47 108 -57 2 704 250 247 123 0 chr17 15658456 15658529 -79614122 - L1M5 LINE L1 -419 5705 5624 2 704 382 292 94 34 chr17 15659185 15659302 -79613349 - RSINE1 SINE B4 -10 155 32 2 704 277 238 43 91 chr17 15660516 15660635 -79612016 - PB1 SINE Alu -1 119 5 2 704 530 111 100 18 chr17 15660651 15660761 -79611890 - B1_Mus2 SINE Alu 0 147 29 2 704 301 233 91 20 chr17 15661054 15661154 -79611497 + PB1D10 SINE Alu 12 117 0 2 704 489 291 128 0 chr17 15661491 15661639 -79611012 - B3A SINE B2 -30 168 2 2 704 352 281 0 0 chr17 15662604 15662700 -79609951 - PB1D10 SINE Alu -13 104 9 2 704 1931 42 4 32 chr17 15662947 15663195 -79609456 + L1_Mus1 LINE L1 6327 6567 0 2 704 1536 239 87 30 chr17 15665272 15665777 -79606874 + RMER5 LTR ERV1 1 534 0 2 704 861 218 92 15 chr17 15666488 15666684 -79605967 + B3 SINE B2 1 211 -5 2 704 244 221 77 87 chr17 15666772 15666876 -79605775 + MT2B LTR ERVL 155 257 -344 2 704 664 134 60 0 chr17 15666784 15666918 -79605733 + B1_Mus2 SINE Alu 6 147 0 2 704 183 129 0 0 chr17 15667227 15667258 -79605393 + (GGAGAA)n Simple_repeat Simple_repeat 1 31 0 2 704 1032 154 71 0 chr17 15667291 15667473 -79605178 + B2_Mm2 SINE B2 1 195 0 2 704 587 108 0 35 chr17 15667473 15667588 -79605063 + (GAA)n Simple_repeat Simple_repeat 3 113 0 2 704 1170 51 0 0 chr17 15668027 15668165 -79604486 - B1_Mus1 SINE Alu -10 138 1 2 704 1991 142 12 3 chr17 15668211 15668542 -79604109 - ORR1B2 LTR MaLR -33 334 1 2 704 637 170 18 0 chr17 15669501 15669613 -79603038 - B1_Mur1 SINE Alu -25 124 11 2 704 2224 154 84 34 chr17 15669611 15670089 -79602562 - RLTR11A LTR ERVK -20 508 7 2 704 1397 90 11 0 chr17 15670161 15670350 -79602301 - B2_Mm1a SINE B2 -2 191 1 2 704 495 33 0 0 chr17 15670850 15670911 -79601740 + (TC)n Simple_repeat Simple_repeat 1 61 0 2 704 1105 60 0 0 chr17 15670912 15671046 -79601605 - B1_Mus1 SINE Alu -13 135 2 2 704 803 278 72 74 chr17 15671063 15671632 -79601019 + RMER16-int LTR ERVK 2915 3382 -4835 2 704 2129 39 4 8 chr17 15671695 15671957 -79600694 + L1_Mus1 LINE L1 6307 6567 0 2 704 252 312 0 60 chr17 15672868 15672984 -79599667 + CT-rich Low_complexity Low_complexity 2 110 0 2 704 13176 96 9 11 chr17 15673893 15674681 -79597970 + RMER16-int LTR ERVK 1668 2454 -2952 2 704 1137 50 0 7 chr17 15674681 15674822 -79597829 + B1_Mm SINE Alu 2 141 -6 2 704 588 29 0 0 chr17 15674824 15674894 -79597757 + (GAAA)n Simple_repeat Simple_repeat 3 72 0 2 704 13176 96 9 11 chr17 15674894 15675952 -79596699 + RMER16-int LTR ERVK 2455 3513 -1893 2 704 804 57 56 8 chr17 15675952 15676077 -79596574 - MTB LTR MaLR 0 400 270 2 704 1132 286 140 36 chr17 15676077 15676272 -79596379 + L1_Rod LINE L1 2181 2412 -3468 2 704 1087 64 43 0 chr17 15676272 15676413 -79596238 + B1_Mm SINE Alu 1 147 0 2 704 2239 193 28 38 chr17 15676413 15676962 -79595689 + L1_Rod LINE L1 2413 3020 -2827 2 704 294 151 19 0 chr17 15676965 15677018 -79595633 - RLTR23 LTR ERV1 -1 429 376 2 704 528 156 12 187 chr17 15677224 15677390 -79595261 - RLTR23 LTR ERV1 -291 139 3 2 704 418 273 45 90 chr17 15677424 15677625 -79595026 - L1_Rod LINE L1 -6929 243 52 2 704 928 148 0 39 chr17 15677648 15677803 -79594848 - B1_Mur4 SINE Alu -1 149 1 2 704 531 45 0 0 chr17 15678123 15678189 -79594462 + (TCTA)n Simple_repeat Simple_repeat 2 67 0 2 704 312 27 0 0 chr17 15678207 15678244 -79594407 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 704 1748 190 33 108 chr17 15678595 15678657 -79593994 + MTC LTR MaLR 1 55 -366 2 704 610 130 83 9 chr17 15678657 15678766 -79593885 + PB1D9 SINE Alu 1 117 -3 2 704 671 72 21 0 chr17 15678766 15678863 -79593788 + (GAAA)n Simple_repeat Simple_repeat 2 100 0 2 704 1748 190 33 108 chr17 15678863 15678934 -79593717 + MTC LTR MaLR 56 134 -287 2 704 1168 103 68 6 chr17 15678934 15679110 -79593541 + B2_Mm2 SINE B2 2 188 -7 2 704 1748 190 33 108 chr17 15679110 15679429 -79593222 + MTC LTR MaLR 135 420 -1 2 704 599 226 0 36 chr17 15679492 15679630 -79593021 - B1_Mur4 SINE Alu 0 150 18 2 704 358 283 30 48 chr17 15679945 15680112 -79592539 - RNLTR23 LTR ERVK 0 642 479 2 704 951 47 0 0 chr17 15680444 15680571 -79592080 + B1_Mus2 SINE Alu 21 147 0 3 704 270 136 0 0 chr17 15680571 15680615 -79592036 + (A)n Simple_repeat Simple_repeat 1 44 0 3 704 556 215 33 0 chr17 15680633 15680754 -79591897 + B1_Mus2 SINE Alu 23 147 0 3 704 228 333 8 8 chr17 15681421 15681638 -79591013 - MMSAT4 Satellite Satellite -5 217 1 3 704 872 144 0 7 chr17 15682602 15682742 -79589909 - B1_Mur3 SINE Alu 0 149 11 3 704 267 185 36 24 chr17 15682742 15682825 -79589826 + T-rich Low_complexity Low_complexity 1 84 0 3 704 22 35 0 0 chr17 15683893 15683922 -79588729 + AT_rich Low_complexity Low_complexity 1 29 0 3 704 1008 207 54 0 chr17 15684173 15684376 -79588275 + B3 SINE B2 2 215 -1 3 704 1143 75 7 0 chr17 15684401 15684548 -79588103 + B1_Mus1 SINE Alu 1 148 0 3 704 207 100 0 0 chr17 15684548 15684578 -79588073 + (A)n Simple_repeat Simple_repeat 1 30 0 3 704 2033 133 58 55 chr17 15686260 15686469 -79586182 - ORR1C2 LTR MaLR 0 384 184 3 704 1612 32 16 0 chr17 15686469 15686659 -79585992 + B2_Mm1t SINE B2 1 193 0 3 704 2033 133 58 55 chr17 15686659 15686831 -79585820 - ORR1C2 LTR MaLR -201 183 2 3 704 613 164 0 15 chr17 15687507 15687549 -79585102 + polypurine Low_complexity Low_complexity 3 43 0 3 704 1139 117 0 6 chr17 15687549 15687730 -79584921 + (GGA)n Simple_repeat Simple_repeat 1 180 0 3 704 613 164 0 15 chr17 15687730 15687817 -79584834 + polypurine Low_complexity Low_complexity 44 129 0 3 704 225 271 17 0 chr17 15688226 15688288 -79584363 + CT-rich Low_complexity Low_complexity 1 63 0 3 704 308 273 13 0 chr17 15688288 15688365 -79584286 - ID4_ SINE ID -4 79 2 3 704 219 257 14 41 chr17 15688365 15688387 -79584264 + polypyrimidine Low_complexity Low_complexity 2 23 0 3 704 252 72 0 67 chr17 15689065 15689110 -79583541 - MT2B LTR ERVL 0 584 543 3 704 435 38 0 0 chr17 15689119 15689172 -79583479 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 704 192 216 0 0 chr17 15689173 15689224 -79583427 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 704 1374 233 46 63 chr17 15689225 15689525 -79583126 - MT2B LTR ERVL -60 541 297 3 704 180 0 0 0 chr17 15689525 15689545 -79583106 + (TA)n Simple_repeat Simple_repeat 2 21 0 3 704 1374 261 75 67 chr17 15689545 15689816 -79582835 - MT2B LTR ERVL -305 296 1 3 704 305 295 105 30 chr17 15690980 15691113 -79581538 + ID_B1 SINE B4 20 162 -62 3 704 799 260 59 0 chr17 15692711 15692915 -79579736 + B3 SINE B2 1 216 0 3 704 1169 44 0 0 chr17 15692936 15693073 -79579578 + B1_Mus2 SINE Alu 2 138 -9 3 704 225 65 0 0 chr17 15693073 15693104 -79579547 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 704 1137 62 7 0 chr17 15693457 15693601 -79579050 + B1_Mm SINE Alu 2 146 -1 3 704 648 192 0 48 chr17 15693601 15693976 -79578675 + GA-rich Low_complexity Low_complexity 1 356 0 3 704 183 42 0 0 chr17 15694442 15694466 -79578185 + (A)n Simple_repeat Simple_repeat 1 24 0 3 704 404 214 60 20 chr17 15694919 15695019 -79577632 - PB1D7 SINE Alu -2 118 15 3 704 479 240 144 12 chr17 15695135 15695308 -79577343 - B3A SINE B2 0 198 3 3 704 453 298 41 0 chr17 15695473 15695594 -79577057 - B1F2 SINE Alu -23 126 1 3 704 445 104 13 0 chr17 15696172 15696249 -79576402 - L1Md_F2 LINE L1 -4 6578 6501 3 704 522 249 11 181 chr17 15696507 15696767 -79575884 + L1M3 LINE L1 4031 4252 -1888 3 704 1150 88 0 0 chr17 15696767 15696914 -79575737 + B1_Mus2 SINE Alu 1 147 0 3 704 522 249 11 181 chr17 15696914 15697001 -79575650 + L1M3 LINE L1 4253 4319 -1821 3 704 1136 131 17 17 chr17 15697003 15697182 -79575469 + B2_Mm1t SINE B2 1 179 -14 3 704 332 160 13 0 chr17 15697229 15697293 -79575358 + B2_Mm2 SINE B2 47 116 -82 3 704 405 0 0 0 chr17 15697309 15697354 -79575297 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 3 704 357 252 253 56 chr17 15697374 15697698 -79574953 + L1M3 LINE L1 4310 4697 -1443 3 704 414 249 87 94 chr17 15697727 15697838 -79574813 + L1M3 LINE L1 5002 5111 -1029 3 704 1260 27 0 0 chr17 15697838 15697984 -79574667 + B1_Mm SINE Alu 2 147 0 3 704 414 249 87 94 chr17 15697984 15698160 -79574491 + L1M3 LINE L1 5112 5287 -853 3 704 450 326 69 50 chr17 15698218 15698557 -79574094 + MLT1A LTR MaLR 33 464 -3 3 704 666 234 134 48 chr17 15698572 15698786 -79573865 + L1M3 LINE L1 5343 5604 -567 3 704 1158 75 0 0 chr17 15698786 15698932 -79573719 + B1_Mus2 SINE Alu 1 146 -1 3 704 666 227 74 57 chr17 15698932 15699045 -79573606 + L1M3 LINE L1 5605 5721 -450 3 704 25 31 0 0 chr17 15699124 15699156 -79573495 + AT_rich Low_complexity Low_complexity 1 32 0 3 704 219 36 0 0 chr17 15699613 15699641 -79573010 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 704 22 0 0 0 chr17 15701838 15701860 -79570791 + AT_rich Low_complexity Low_complexity 1 22 0 3 704 566 243 30 61 chr17 15701984 15702181 -79570470 + B3A SINE B2 2 192 -6 3 704 396 72 43 0 chr17 15702331 15702400 -79570251 + (TA)n Simple_repeat Simple_repeat 2 73 0 3 704 4161 45 22 0 chr17 15702522 15703014 -79569637 + RLTR1C LTR ERV1 1 503 0 3 704 245 196 0 51 chr17 15703564 15703623 -79569028 + RSINE1 SINE B4 73 128 -37 3 704 189 147 0 0 chr17 15703641 15703675 -79568976 + (CATG)n Simple_repeat Simple_repeat 1 34 0 3 704 1122 109 43 11 chr17 15703972 15704158 -79568493 + B2_Mm2 SINE B2 1 192 -3 3 704 307 280 13 0 chr17 15704292 15704367 -79568284 + ID4_ SINE ID 2 77 -6 3 704 1153 83 0 0 chr17 15704689 15704834 -79567817 + B1_Mus2 SINE Alu 2 146 -1 3 704 509 160 21 26 chr17 15704859 15705051 -79567600 + RMER17D2 LTR ERVK 312 502 -307 3 704 396 0 0 0 chr17 15705052 15705096 -79567555 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 3 704 1120 81 6 0 chr17 15705097 15705258 -79567393 + B2_Mm1t SINE B2 2 163 -30 3 704 324 0 0 0 chr17 15705258 15705294 -79567357 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 704 277 228 38 0 chr17 15706151 15706230 -79566421 - RLTR23 LTR ERV1 0 430 349 3 704 680 185 133 62 chr17 15706823 15707059 -79565592 + ORR1B1 LTR MaLR 8 280 -114 3 704 787 181 7 32 chr17 15707867 15708021 -79564630 - RLTR42-int LTR ERVK -44 5478 5329 3 704 2305 162 44 69 chr17 15708021 15708499 -79564152 - RLTR42-int LTR ERVK -1054 4468 4003 3 704 1464 69 11 0 chr17 15708524 15708713 -79563938 + B2_Mm1t SINE B2 2 192 -1 3 704 3858 161 46 30 chr17 15708844 15709586 -79563065 - RLTR42-int LTR ERVK -2646 2876 2123 3 704 406 127 56 0 chr17 15709620 15709691 -79562960 - RLTR42-int LTR ERVK -3380 2142 2068 3 704 1489 68 5 10 chr17 15710183 15710377 -79562274 - B2_Mm1t SINE B2 0 193 1 3 704 939 126 0 33 chr17 15711031 15711211 -79561440 + CT-rich Low_complexity Low_complexity 3 176 0 3 704 189 0 0 0 chr17 15711214 15711235 -79561416 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 704 407 192 3 0 chr17 15711235 15711313 -79561338 - B1_Mus2 SINE Alu -69 81 2 3 704 394 257 70 57 chr17 15711348 15711505 -79561146 - RLTR14 LTR ERV1 0 382 224 3 704 1261 41 0 0 chr17 15711698 15711845 -79560806 - B1_Mus2 SINE Alu 0 147 1 3 704 1085 94 0 53 chr17 15711881 15712050 -79560601 - RLTR42-int LTR ERVK -3473 2049 1890 3 704 207 0 0 0 chr17 15712053 15712076 -79560575 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 3 704 234 0 0 0 chr17 15713312 15713338 -79559313 + (T)n Simple_repeat Simple_repeat 1 26 0 3 704 279 114 0 0 chr17 15714385 15714429 -79558222 + (CCCG)n Simple_repeat Simple_repeat 3 46 0 3 704 195 42 0 0 chr17 15714672 15714696 -79557955 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 3 704 757 82 24 32 chr17 15714697 15714823 -79557828 - B1_Mus2 SINE Alu -2 145 21 3 704 423 0 0 0 chr17 15715079 15715126 -79557525 + (GA)n Simple_repeat Simple_repeat 1 47 0 3 704 541 249 105 35 chr17 15715182 15715316 -79557335 - RLTR42-int LTR ERVK -3727 1795 1644 3 704 1334 97 37 16 chr17 15715316 15715505 -79557146 + B2_Mm2 SINE B2 2 194 -1 3 704 541 249 105 35 chr17 15715505 15715541 -79557110 - RLTR42-int LTR ERVK -3879 1643 1613 3 704 2033 101 158 36 chr17 15715589 15715950 -79556701 - MTB_Mm LTR MaLR -2 405 1 3 704 547 172 11 0 chr17 15715957 15716050 -79556601 - RLTR42-int LTR ERVK -4363 1159 1066 3 704 1282 68 48 92 chr17 15716129 15716357 -79556294 - MTB LTR MaLR -182 218 1 3 704 636 213 105 89 chr17 15716358 15716616 -79556035 - RLTR42-int LTR ERVK -5260 262 1 3 704 446 182 68 39 chr17 15716920 15717023 -79555628 + PB1D9 SINE Alu 15 120 0 3 704 230 310 147 32 chr17 15717084 15717274 -79555377 - MLT1H2 LTR MaLR -2 487 276 3 704 1268 72 49 22 chr17 15717367 15717551 -79555100 - B2_Mm1t SINE B2 -4 189 1 3 704 1044 121 118 22 chr17 15718102 15718280 -79554371 + B2_Mm2 SINE B2 1 195 0 3 704 572 277 7 7 chr17 15718388 15718537 -79554114 - B1_Mur1 SINE Alu 0 149 1 3 704 734 304 9 0 chr17 15718814 15719028 -79553623 - B3 SINE B2 0 216 1 3 704 346 323 27 92 chr17 15719157 15719341 -79553310 + Arthur1B DNA Tip100 218 389 -836 3 704 282 230 195 0 chr17 15719348 15719435 -79553216 + PB1D7 SINE Alu 1 104 -16 3 704 492 248 9 27 chr17 15719467 15719579 -79553072 + PB1D10 SINE Alu 6 115 -2 3 704 760 213 73 32 chr17 15719634 15719852 -79552799 + Lx8 LINE L1 7181 7407 -66 3 704 35 0 0 0 chr17 15719901 15719936 -79552715 + AT_rich Low_complexity Low_complexity 1 35 0 3 704 390 197 15 0 chr17 15720321 15720387 -79552264 + ID SINE ID 2 68 -156 3 704 299 333 12 0 chr17 15720387 15720402 -79552249 + BC1_Mm scRNA scRNA 2 83 -69 3 704 416 238 9 38 chr17 15721369 15721474 -79551177 + RSINE1 SINE B4 3 104 -61 3 704 24 53 0 0 chr17 15721523 15721561 -79551090 + AT_rich Low_complexity Low_complexity 1 38 0 3 704 22 35 0 0 chr17 15721611 15721640 -79551011 + AT_rich Low_complexity Low_complexity 1 29 0 3 704 26 30 0 0 chr17 15721810 15721843 -79550808 + AT_rich Low_complexity Low_complexity 1 33 0 3 704 44 0 0 0 chr17 15721872 15721916 -79550735 + AT_rich Low_complexity Low_complexity 1 44 0 3 704 406 219 248 20 chr17 15721937 15722086 -79550565 - B3A SINE B2 -15 183 1 3 704 280 282 0 40 chr17 15722298 15722372 -79550279 + RSINE1 SINE B4 3 73 -92 3 704 711 203 0 25 chr17 15722921 15723164 -79549487 + CT-rich Low_complexity Low_complexity 1 236 0 3 704 507 289 0 0 chr17 15723187 15723360 -79549291 + CT-rich Low_complexity Low_complexity 1 173 0 3 704 776 189 14 0 chr17 15723360 15723503 -79549148 - B1_Mur4 SINE Alu 0 150 6 3 704 950 69 0 8 chr17 15723514 15723646 -79549005 + (TTTC)n Simple_repeat Simple_repeat 2 132 0 3 704 1204 52 0 0 chr17 15723646 15723781 -79548870 - B1_Mm SINE Alu -12 135 1 4 704 5400 62 1 8 chr17 15723788 15724475 -79548176 - L1_Mus1 LINE L1 0 6567 5917 4 704 489 110 0 0 chr17 15724722 15724795 -79547856 + (GA)n Simple_repeat Simple_repeat 2 74 0 4 704 424 276 106 56 chr17 15724815 15724957 -79547694 - RSINE1 SINE B4 -13 152 4 4 704 569 239 59 22 chr17 15725451 15725649 -79547002 - MLT1F2 LTR MaLR -3 624 414 4 704 207 0 0 0 chr17 15725651 15725674 -79546977 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 704 1178 73 0 0 chr17 15725674 15725811 -79546840 - B1_Mus2 SINE Alu -9 138 2 4 704 22 0 0 0 chr17 15725815 15725837 -79546814 + AT_rich Low_complexity Low_complexity 1 22 0 4 704 347 323 153 18 chr17 15725839 15726061 -79546590 - MLT1F2 LTR MaLR -265 304 40 4 704 254 256 146 34 chr17 15726229 15726318 -79546333 - MTE2b LTR MaLR -11 368 270 4 704 483 209 73 0 chr17 15726741 15726851 -79545800 + RSINE1 SINE B4 2 119 -46 4 704 1294 28 14 0 chr17 15726851 15726996 -79545655 + B1_Mm SINE Alu 1 147 0 4 704 239 360 52 74 chr17 15727113 15727238 -79545413 + ID_B1 SINE B4 2 123 -101 4 704 267 305 0 0 chr17 15727238 15727297 -79545354 + BC1_Mm scRNA scRNA 2 60 -92 4 704 1171 70 28 0 chr17 15727346 15727489 -79545162 + B1_Mm SINE Alu 1 147 0 4 704 234 361 59 37 chr17 15727635 15727770 -79544881 + ORR1B1 LTR MaLR 24 161 -233 4 704 198 103 0 0 chr17 15727812 15727841 -79544810 + (CCA)n Simple_repeat Simple_repeat 3 31 0 4 704 542 197 0 8 chr17 15728034 15728162 -79544489 + CT-rich Low_complexity Low_complexity 2 128 0 4 704 1314 41 0 0 chr17 15728164 15728311 -79544340 - B1_Mus1 SINE Alu 0 148 2 4 705 295 262 80 48 chr17 15729165 15729398 -79543253 + L1MA4 LINE L1 5852 6093 -1551 4 705 277 198 72 0 chr17 15729444 15729555 -79543096 + (TA)n Simple_repeat Simple_repeat 2 120 0 4 705 3810 37 100 114 chr17 15729601 15730239 -79542412 - RLTR6_Mm LTR ERV1 -25 629 1 4 705 2883 294 98 16 chr17 15730242 15731274 -79541377 + Lx8 LINE L1 6242 7357 -116 4 705 312 27 0 0 chr17 15731281 15731318 -79541333 + (GGA)n Simple_repeat Simple_repeat 3 39 0 4 705 453 144 0 0 chr17 15731457 15731561 -79541090 + (TATATG)n Simple_repeat Simple_repeat 2 105 0 4 705 393 293 121 65 chr17 15731782 15731864 -79540787 + RSINE1 SINE B4 4 97 -68 4 705 1553 197 142 29 chr17 15731864 15732047 -79540604 - ORR1C2 LTR MaLR 0 384 173 4 705 408 40 0 0 chr17 15732047 15732097 -79540554 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 705 1553 197 142 29 chr17 15732097 15732258 -79540393 - ORR1C2 LTR MaLR -212 172 2 4 705 393 293 121 65 chr17 15732258 15732299 -79540352 + RSINE1 SINE B4 98 134 -31 4 705 227 206 175 0 chr17 15732648 15732711 -79539940 - PB1D10 SINE Alu -6 111 38 4 705 217 113 19 19 chr17 15732752 15732793 -79539858 + T-rich Low_complexity Low_complexity 15 55 0 4 705 1205 75 0 0 chr17 15732793 15732940 -79539711 - B1_Mus2 SINE Alu 0 147 1 4 705 217 113 19 19 chr17 15732940 15732952 -79539699 + T-rich Low_complexity Low_complexity 3 14 0 4 705 1253 48 0 33 chr17 15733073 15733086 -79539565 - B1_Mus2 SINE Alu -1 146 138 4 705 207 0 0 0 chr17 15733086 15733109 -79539542 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 705 1253 48 0 33 chr17 15733109 15733245 -79539406 - B1_Mus2 SINE Alu -10 137 2 4 705 252 0 0 0 chr17 15733400 15733428 -79539223 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 705 515 295 21 14 chr17 15733438 15733579 -79539072 - B1F1 SINE Alu -7 142 1 4 705 1244 41 7 7 chr17 15733853 15733999 -79538652 - B1_Mm SINE Alu 0 147 2 4 705 1265 126 11 0 chr17 15734507 15734682 -79537969 + B2_Mm1t SINE B2 3 179 -14 4 705 365 100 330 9 chr17 15734733 15734842 -79537809 + B2_Mm2 SINE B2 47 190 -5 4 705 380 19 0 37 chr17 15735638 15735692 -79536959 + (TAAA)n Simple_repeat Simple_repeat 3 54 0 4 705 215 253 111 25 chr17 15735852 15735933 -79536718 - B4 SINE B4 -204 88 1 4 705 187 396 0 40 chr17 15735936 15736036 -79536615 - MIR SINE MIR -57 151 56 4 705 1301 54 0 0 chr17 15736338 15736485 -79536166 + B1_Mus2 SINE Alu 1 147 0 4 705 245 75 25 0 chr17 15736492 15736532 -79536119 + (CGGGGG)n Simple_repeat Simple_repeat 2 42 0 4 705 264 258 180 0 chr17 15736912 15737001 -79535650 - MIRb SINE MIR -121 147 43 4 705 263 357 102 0 chr17 15737938 15738036 -79534615 + PB1 SINE Alu 6 113 -14 4 705 185 222 56 0 chr17 15738049 15738103 -79534548 - MIR3 SINE MIR -2 206 150 4 705 23 33 0 0 chr17 15738103 15738133 -79534518 + AT_rich Low_complexity Low_complexity 1 30 0 4 705 331 291 103 0 chr17 15738953 15739070 -79533581 + B4 SINE B4 77 205 -87 4 705 507 270 30 53 chr17 15738968 15739101 -79533550 + B1F1 SINE Alu 11 140 -9 4 705 846 0 0 0 chr17 15739101 15739195 -79533456 + (GGAAA)n Simple_repeat Simple_repeat 3 96 0 4 705 423 56 0 0 chr17 15739652 15739706 -79532945 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 705 312 91 0 0 chr17 15739703 15739747 -79532904 + (GGA)n Simple_repeat Simple_repeat 3 46 0 4 705 2352 79 3 54 chr17 15739814 15740164 -79532487 - IAPLTR1a_Mm LTR ERVK -5 332 1 4 705 57527 17 8 6 chr17 15740164 15746599 -79526052 - IAPEz-int LTR ERVK 0 6481 35 4 705 2352 79 3 54 chr17 15746611 15746961 -79525690 - IAPLTR1a_Mm LTR ERVK -5 332 1 4 705 919 246 19 19 chr17 15747043 15747258 -79525393 - B3 SINE B2 0 216 2 4 705 253 294 72 14 chr17 15747291 15747360 -79525291 - tRNA-Ala-GCA tRNA tRNA -1 74 2 4 705 284 254 0 0 chr17 15749270 15749333 -79523318 + RSINE1 SINE B4 41 103 -62 4 705 216 86 0 0 chr17 15749363 15749398 -79523253 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 4 705 1177 90 0 0 chr17 15749398 15749543 -79523108 - B1_Mus2 SINE Alu 0 147 3 4 705 438 229 132 25 chr17 15749590 15749711 -79522940 - B3 SINE B2 -19 197 64 4 705 230 217 0 0 chr17 15749753 15749799 -79522852 - B2_Mm2 SINE B2 -102 93 48 4 705 428 269 21 90 chr17 15750136 15750296 -79522355 - Lx7 LINE L1 -10 7686 7544 4 705 1262 48 7 0 chr17 15750296 15750437 -79522214 + B1_Mm SINE Alu 1 142 -5 4 705 272 27 27 0 chr17 15750437 15750474 -79522177 + (CAA)n Simple_repeat Simple_repeat 2 39 0 4 705 428 269 21 90 chr17 15750474 15750550 -79522101 - Lx7 LINE L1 -153 7543 7470 4 705 192 125 0 0 chr17 15750550 15750582 -79522069 + (GA)n Simple_repeat Simple_repeat 2 33 0 4 705 26 74 0 0 chr17 15750632 15750686 -79521965 + AT_rich Low_complexity Low_complexity 1 54 0 4 705 2473 81 3 0 chr17 15750687 15751007 -79521644 - ORR1A2 LTR MaLR -1 326 6 4 705 1731 32 0 0 chr17 15751007 15751197 -79521454 - B2_Mm1a SINE B2 -2 191 2 4 705 519 262 0 149 chr17 15751216 15751309 -79521342 + B1_Mur1 SINE Alu 1 71 -78 4 705 1181 56 28 7 chr17 15751309 15751452 -79521199 - B1_Mm SINE Alu -1 146 1 4 705 519 262 0 149 chr17 15751452 15751533 -79521118 + B1_Mur1 SINE Alu 72 149 0 4 705 874 114 18 23 chr17 15752431 15752602 -79520049 + CT-rich Low_complexity Low_complexity 4 173 0 4 705 260 111 0 0 chr17 15752602 15752638 -79520013 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 4 705 1195 84 0 0 chr17 15752650 15752792 -79519859 - B1_Mus1 SINE Alu -6 142 1 4 705 432 244 33 57 chr17 15753581 15753703 -79518948 + PB1D7 SINE Alu 1 119 -1 4 705 361 175 8 17 chr17 15754012 15754074 -79518577 + PB1D10 SINE Alu 2 61 -253 4 705 1831 32 0 0 chr17 15754074 15754293 -79518358 - MTB LTR MaLR 0 400 182 4 705 228 67 0 0 chr17 15754293 15754323 -79518328 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 4 705 1114 95 0 12 chr17 15754324 15754484 -79518167 - B2_Mm2 SINE B2 -37 158 1 4 705 1402 85 10 2 chr17 15754484 15754674 -79517977 - MTB LTR MaLR -205 191 4 4 705 300 300 0 24 chr17 15754684 15754766 -79517885 + B1F SINE Alu 67 146 -3 4 705 397 254 23 69 chr17 15755006 15755137 -79517514 - MLT1A0 LTR MaLR -240 125 1 4 705 305 137 0 0 chr17 15755391 15755442 -79517209 + B1_Mus2 SINE Alu 76 126 -21 4 705 538 187 0 0 chr17 15755570 15755661 -79516990 - RLTR33 LTR ERVK -587 91 1 4 705 1185 95 0 0 chr17 15756125 15756273 -79516378 - B1_Mus1 SINE Alu 0 148 1 4 705 772 180 244 23 chr17 15756278 15756454 -79516197 - B3 SINE B2 0 216 2 4 705 226 384 30 0 chr17 15756524 15756539 -79516112 - B3 SINE B2 -114 102 1 4 705 437 286 0 0 chr17 15756539 15756623 -79516028 - RSINE1 SINE B4 -80 85 2 4 705 300 230 22 22 chr17 15756787 15756876 -79515775 + PB1D10 SINE Alu 28 116 -1 4 705 469 268 167 0 chr17 15756899 15757037 -79515614 + MTEb LTR MaLR 166 326 -53 4 705 626 68 11 0 chr17 15757105 15757193 -79515458 + (TC)n Simple_repeat Simple_repeat 2 90 0 4 705 658 260 90 32 chr17 15758452 15758607 -79514044 + RSINE1 SINE B4 2 165 0 4 705 557 187 7 0 chr17 15758609 15758748 -79513903 + (CA)n Simple_repeat Simple_repeat 1 140 0 4 705 453 260 10 0 chr17 15759143 15759247 -79513404 + ID_B1 SINE B4 99 203 -21 4 705 232 330 10 10 chr17 15759457 15759561 -79513090 - L2 LINE L2 -1896 1523 1420 4 705 2781 64 3 55 chr17 15760903 15761268 -79511383 + ORR1A1 LTR MaLR 1 346 0 4 705 421 227 0 96 chr17 15761285 15761451 -79511200 + Lx7 LINE L1 7357 7506 -190 4 705 1257 143 23 0 chr17 15761434 15761650 -79511001 - L1_Mur3 LINE L1 -2183 3697 3477 4 705 2059 147 21 38 chr17 15761654 15762077 -79510574 - L1_Mur3 LINE L1 -2702 3178 2763 4 705 1133 219 42 32 chr17 15762090 15762402 -79510249 - RLTR15 LTR ERVK -19 340 26 4 705 4518 204 92 65 chr17 15762414 15763928 -79508723 - MYSERV6-int LTR ERVK -1 8958 7769 4 705 1334 40 0 0 chr17 15763928 15764076 -79508575 + B1_Mus1 SINE Alu 1 148 0 4 705 2825 276 113 96 chr17 15764076 15764817 -79507834 - MYSERV6-int LTR ERVK -1548 778 5 4 705 6822 176 60 37 chr17 15764825 15765946 -79506705 - L1_Mur3 LINE L1 -3111 2769 1619 4 705 1373 60 42 0 chr17 15765946 15766112 -79506539 + B2_Mm1t SINE B2 3 175 -18 4 705 6822 176 60 37 chr17 15766112 15766302 -79506349 - L1_Mur3 LINE L1 -4262 1618 1435 4 705 243 0 0 0 chr17 15766302 15766329 -79506322 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 705 6822 194 66 50 chr17 15766329 15767205 -79505446 - L1_Mur3 LINE L1 -4446 1434 534 4 705 603 229 8 8 chr17 15767205 15767324 -79505327 - PB1D9 SINE Alu -1 119 1 4 705 274 367 32 52 chr17 15767692 15767847 -79504804 + ID_B1 SINE B4 6 157 -67 5 705 218 283 22 0 chr17 15767907 15767953 -79504698 + ID_B1 SINE B4 81 127 -97 5 705 245 178 21 43 chr17 15767912 15767959 -79504692 + PB1D9 SINE Alu 5 50 -70 5 705 198 171 0 0 chr17 15767978 15768019 -79504632 + CT-rich Low_complexity Low_complexity 6 46 0 5 705 338 287 30 76 chr17 15768028 15768160 -79504491 + MT2B LTR ERVL 153 278 -323 5 705 755 186 21 21 chr17 15768043 15768186 -79504465 + B1_Mur1 SINE Alu 7 149 0 5 705 1916 197 80 123 chr17 15768345 15769017 -79503634 + RLTR42-int LTR ERVK 4822 5464 -58 5 705 519 45 0 0 chr17 15769565 15769631 -79503020 + (TG)n Simple_repeat Simple_repeat 2 67 0 5 705 264 246 101 0 chr17 15769631 15769700 -79502951 - RSINE1 SINE B4 -41 124 49 5 705 306 0 0 0 chr17 15769825 15769859 -79502792 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 5 705 274 284 44 44 chr17 15770494 15770608 -79502043 - PB1D9 SINE Alu -2 118 5 5 705 388 320 8 30 chr17 15770641 15770755 -79501896 + RSINE1 SINE B4 5 118 -47 5 705 990 190 48 133 chr17 15770755 15771107 -79501544 + RLTRETN_Mm LTR ERVK 1 322 0 5 705 388 320 8 30 chr17 15771107 15771124 -79501527 + RSINE1 SINE B4 119 132 -33 5 705 15000 175 75 97 chr17 15771124 15773349 -79499302 + MMETn-int LTR ERVK 18 2234 -2610 5 705 3134 70 3 0 chr17 15773349 15773732 -79498919 - L1Md_F2 LINE L1 0 6582 6199 5 705 15000 175 75 97 chr17 15773732 15775149 -79497502 + MMETn-int LTR ERVK 2235 3592 -1252 5 705 266 0 0 29 chr17 15775149 15775184 -79497467 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 705 15000 175 75 97 chr17 15775184 15776058 -79496593 + MMETn-int LTR ERVK 3593 4440 -404 5 705 331 237 118 74 chr17 15776058 15776272 -79496379 + RLTR13B1 LTR ERVK 92 321 -572 5 705 1026 189 36 22 chr17 15776276 15776498 -79496153 + MMETn-int LTR ERVK 4620 4844 0 5 705 1112 194 34 129 chr17 15776498 15776854 -79495797 + RLTRETN_Mm LTR ERVK 1 322 0 5 705 326 61 20 0 chr17 15776914 15776963 -79495688 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 705 468 273 47 114 chr17 15777050 15777261 -79495390 - B3A SINE B2 -1 197 1 5 705 255 204 144 22 chr17 15777327 15777417 -79495234 + Charlie8 DNA MER1_type 91 191 -2237 5 705 506 201 34 82 chr17 15777505 15777651 -79495000 + RLTR15 LTR ERVK 1 139 -220 5 705 352 269 106 72 chr17 15777681 15777945 -79494706 + RLTR15 LTR ERVK 78 350 -9 5 705 914 144 29 4 chr17 15778123 15778361 -79494290 + CT-rich Low_complexity Low_complexity 1 243 0 5 705 261 0 0 0 chr17 15779307 15779336 -79493315 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 705 1180 76 0 0 chr17 15779336 15779472 -79493179 - B1_Mus2 SINE Alu -9 138 3 5 705 1288 114 11 0 chr17 15779577 15779753 -79492898 + B2_Mm1t SINE B2 2 179 -14 5 705 345 88 439 24 chr17 15779819 15779901 -79492750 + B2_Mm2 SINE B2 47 162 -33 5 705 360 0 0 0 chr17 15779901 15779941 -79492710 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 5 705 286 215 98 37 chr17 15780057 15780139 -79492512 + MLT1B LTR MaLR 39 125 -265 5 705 1292 48 0 0 chr17 15780139 15780286 -79492365 + B1_Mus2 SINE Alu 1 147 0 5 705 195 42 0 0 chr17 15780290 15780314 -79492337 + (A)n Simple_repeat Simple_repeat 1 24 0 5 705 368 234 146 21 chr17 15780334 15780430 -79492221 + PB1D10 SINE Alu 3 110 -7 5 705 24 0 0 0 chr17 15780433 15780457 -79492194 + AT_rich Low_complexity Low_complexity 1 24 0 5 705 866 308 6 98 chr17 15780459 15780776 -79491875 + B4 SINE B4 1 288 -4 5 705 390 21 0 0 chr17 15780783 15780830 -79491821 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 705 1335 72 27 27 chr17 15781069 15781255 -79491396 - B2_Mm2 SINE B2 -9 186 1 5 705 330 348 76 0 chr17 15781284 15781402 -79491249 - RSINE1 SINE B4 -2 163 37 5 705 197 33 33 0 chr17 15781626 15781656 -79490995 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 5 705 3104 43 0 0 chr17 15781993 15782339 -79490312 - ORR1A1 LTR MaLR 0 346 1 5 705 783 220 60 64 chr17 15782550 15782783 -79489868 - MTC-int LTR MaLR -652 606 375 5 705 316 255 61 41 chr17 15783097 15783195 -79489456 + PB1 SINE Alu 25 124 -3 5 705 561 332 79 8 chr17 15783313 15783680 -79488971 - Lx9 LINE L1 -27 7617 7225 5 705 1085 83 0 6 chr17 15784324 15784505 -79488146 + (GA)n Simple_repeat Simple_repeat 1 180 0 5 705 240 146 0 0 chr17 15784507 15784548 -79488103 - ORR1C2 LTR MaLR -339 45 5 5 705 371 263 81 40 chr17 15784596 15784695 -79487956 - ID_B1 SINE B4 -40 184 82 5 705 422 269 137 42 chr17 15784724 15785061 -79487590 - Charlie4a DNA MER1_type -128 380 5 5 705 654 225 8 57 chr17 15785069 15785232 -79487419 + B1F SINE Alu 2 142 -7 5 705 474 148 24 12 chr17 15785802 15785966 -79486685 + (CA)n Simple_repeat Simple_repeat 1 166 0 5 705 726 163 79 36 chr17 15786015 15786028 -79486623 - B1_Mur3 SINE Alu -1 148 137 5 705 243 0 0 0 chr17 15786028 15786055 -79486596 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 5 705 726 163 79 36 chr17 15786055 15786181 -79486470 - B1_Mur3 SINE Alu -13 136 3 5 705 513 0 0 0 chr17 15786209 15786266 -79486385 + (TCTA)n Simple_repeat Simple_repeat 1 57 0 5 705 660 272 0 69 chr17 15786356 15786530 -79486121 - RSINE1 SINE B4 0 165 4 5 705 212 344 20 51 chr17 15786913 15787011 -79485640 + L2 LINE L2 2340 2434 -985 5 705 365 267 124 39 chr17 15787611 15787845 -79484806 + Charlie5 DNA MER1_type 2371 2624 0 5 705 357 182 91 0 chr17 15788135 15788212 -79484439 + PB1 SINE Alu 44 127 0 5 705 281 26 26 0 chr17 15788212 15788250 -79484401 + (GGGA)n Simple_repeat Simple_repeat 1 39 0 5 705 21 57 0 0 chr17 15788469 15788504 -79484147 + AT_rich Low_complexity Low_complexity 1 35 0 5 705 1732 125 95 80 chr17 15788566 15788915 -79483736 - ORR1B1 LTR MaLR 0 394 41 5 705 231 274 0 0 chr17 15789160 15789211 -79483440 - ID_B1 SINE B4 -20 204 154 5 705 378 0 0 0 chr17 15789256 15789298 -79483353 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 705 563 262 92 7 chr17 15789304 15789446 -79483205 - B3A SINE B2 -44 154 1 5 705 774 196 91 46 chr17 15789476 15789717 -79482934 + RLTR12B LTR ERVK 47 298 -230 5 705 777 250 40 62 chr17 15789730 15790003 -79482648 + RLTR12B LTR ERVK 249 515 -13 5 705 387 0 0 0 chr17 15790273 15790316 -79482335 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 705 373 230 60 90 chr17 15790337 15790471 -79482180 - RSINE1 SINE B4 -35 130 1 5 705 186 43 0 0 chr17 15791043 15791066 -79481585 + (T)n Simple_repeat Simple_repeat 1 23 0 5 705 1176 42 21 14 chr17 15791066 15791211 -79481440 - B1_Mm SINE Alu 0 147 2 5 705 428 218 35 86 chr17 15791473 15791593 -79481058 + PB1D7 SINE Alu 1 127 0 5 705 755 224 98 44 chr17 15791593 15791798 -79480853 + B3 SINE B2 1 216 0 5 705 403 320 129 14 chr17 15792084 15792379 -79480272 - L2 LINE L2 -528 2891 2563 5 705 222 191 0 0 chr17 15792380 15792427 -79480224 + GA-rich Low_complexity Low_complexity 2 48 0 5 705 603 275 35 0 chr17 15792694 15792836 -79479815 + ID_B1 SINE B4 78 224 0 5 705 1200 78 0 0 chr17 15792848 15792990 -79479661 + B1_Mus1 SINE Alu 1 142 -6 5 705 191 36 36 0 chr17 15792993 15793021 -79479630 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5 705 258 219 0 0 chr17 15793130 15793194 -79479457 + CT-rich Low_complexity Low_complexity 1 64 0 5 705 504 48 0 0 chr17 15793616 15793679 -79478972 + (TTTC)n Simple_repeat Simple_repeat 1 63 0 5 705 410 254 277 6 chr17 15793679 15793845 -79478806 - ID_B1 SINE B4 -12 212 2 5 705 21 0 0 0 chr17 15793902 15793923 -79478728 + AT_rich Low_complexity Low_complexity 1 21 0 5 705 393 300 73 121 chr17 15794014 15794122 -79478529 + LTR16B2 LTR ERVL 163 264 -198 5 705 2473 151 22 20 chr17 15794122 15794528 -79478123 + MTB_Mm LTR MaLR 1 407 0 5 705 393 300 73 121 chr17 15794528 15794734 -79477917 + LTR16B2 LTR ERVL 265 462 0 5 705 847 268 13 26 chr17 15794841 15795071 -79477580 + B4A SINE B4 1 227 -65 5 705 1250 77 6 0 chr17 15795071 15795230 -79477421 + B2_Mm1t SINE B2 1 160 -33 5 705 249 57 0 0 chr17 15795230 15795265 -79477386 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 5 705 4387 49 9 33 chr17 15795305 15795849 -79476802 - L1_Mus1 LINE L1 0 6567 6037 5 705 888 201 74 20 chr17 15795849 15796048 -79476603 + B3 SINE B2 3 212 -4 5 705 244 270 148 45 chr17 15796733 15796888 -79475763 - Lx7 LINE L1 -533 7111 6818 5 705 627 200 184 22 chr17 15796907 15797086 -79475565 - Lx8 LINE L1 -977 6496 6289 5 705 823 160 68 40 chr17 15797087 15797263 -79475388 + B2_Mm2 SINE B2 7 187 -8 5 705 1306 266 25 137 chr17 15797268 15797688 -79474963 - L1_Mur3 LINE L1 -1810 4070 3724 5 705 858 222 22 28 chr17 15797688 15797869 -79474782 - B3A SINE B2 -18 180 1 5 705 1306 266 25 137 chr17 15797869 15798136 -79474515 - L1_Mur3 LINE L1 -2157 3723 3460 5 705 1426 102 0 5 chr17 15798140 15798328 -79474323 - B2_Mm2 SINE B2 -6 189 3 5 705 545 250 0 0 chr17 15798374 15798486 -79474165 - B3 SINE B2 -102 114 3 5 705 576 236 67 115 chr17 15798490 15798569 -79474082 - L1_Mur3 LINE L1 -2904 2973 2925 5 705 1615 53 27 0 chr17 15798569 15798756 -79473895 - B2_Mm1t SINE B2 0 193 2 5 705 699 219 79 43 chr17 15798756 15799018 -79473633 - L1_Mur3 LINE L1 -986 2928 2647 5 705 25 31 0 0 chr17 15799525 15799557 -79473094 + AT_rich Low_complexity Low_complexity 1 32 0 5 705 567 340 131 48 chr17 15799563 15800165 -79472486 - HAL1 LINE L1 -1052 1455 804 5 705 2041 221 5 239 chr17 15800363 15800513 -79472138 - RMER19C LTR ERVK 0 611 475 5 705 223 28 56 0 chr17 15800513 15800549 -79472102 + (TTG)n Simple_repeat Simple_repeat 2 39 0 5 705 2041 221 5 239 chr17 15800549 15801196 -79471455 - RMER19C LTR ERVK -137 474 1 5 705 182 171 24 0 chr17 15801921 15801962 -79470689 + CT-rich Low_complexity Low_complexity 2 43 0 5 705 625 169 15 0 chr17 15802053 15802189 -79470462 + (TCCA)n Simple_repeat Simple_repeat 4 141 0 5 705 454 261 35 92 chr17 15802526 15802699 -79469952 - B3A SINE B2 -8 190 28 5 705 1514 54 16 21 chr17 15802855 15803045 -79469606 - B2_Mm1a SINE B2 -3 190 2 5 705 921 252 42 50 chr17 15803094 15803258 -79469393 + L1MA5 LINE L1 5462 5697 -603 6 705 2613 81 16 0 chr17 15803258 15803580 -79469071 - ORR1A2 LTR MaLR 0 327 1 6 705 921 253 81 50 chr17 15803580 15803799 -79468852 + L1MA5 LINE L1 5630 5931 -369 6 705 21 0 0 0 chr17 15803927 15803948 -79468703 + GC_rich Low_complexity Low_complexity 1 21 0 6 705 1117 56 7 0 chr17 15803952 15804094 -79468557 + B1_Mus1 SINE Alu 6 148 0 6 705 186 71 0 0 chr17 15804097 15804125 -79468526 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 6 705 466 235 29 0 chr17 15804218 15804320 -79468331 - ORR1D1 LTR MaLR 0 374 270 6 705 681 152 37 29 chr17 15804311 15804447 -79468204 - ORR1D1-int LTR MaLR -45 1918 1782 6 705 180 0 0 0 chr17 15804452 15804472 -79468179 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 6 705 1107 99 0 0 chr17 15804473 15804624 -79468027 - B2_Mm2 SINE B2 -37 158 8 6 705 8558 149 53 63 chr17 15804625 15805520 -79467131 - ORR1D1-int LTR MaLR -191 1772 1002 6 705 1286 54 0 0 chr17 15805520 15805667 -79466984 - B1_Mus2 SINE Alu 0 147 1 6 705 8558 152 31 102 chr17 15805667 15806544 -79466107 - ORR1D1-int LTR MaLR -929 1034 203 6 705 1218 62 7 0 chr17 15806544 15806688 -79465963 + B1_Mus2 SINE Alu 2 146 -1 6 705 8558 152 31 102 chr17 15806688 15806935 -79465716 - ORR1D1-int LTR MaLR -1761 202 1 6 705 254 125 0 0 chr17 15806933 15806973 -79465678 - ORR1D1 LTR MaLR -2 392 353 6 705 1903 118 25 93 chr17 15806977 15807342 -79465309 - ORR1B1 LTR MaLR -8 386 47 6 705 810 257 95 149 chr17 15807357 15807882 -79464769 + Lx8 LINE L1 6603 7099 -374 6 705 207 0 0 0 chr17 15807882 15807905 -79464746 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 705 456 62 0 0 chr17 15807920 15807984 -79464667 + (GA)n Simple_repeat Simple_repeat 1 64 0 6 705 1254 48 0 0 chr17 15808096 15808243 -79464408 + B1_Mm SINE Alu 1 147 0 6 705 1328 20 0 0 chr17 15808290 15808436 -79464215 + B1_Mus2 SINE Alu 2 147 0 6 705 3938 78 2 2 chr17 15808639 15809114 -79463537 + MT2C_Mm LTR ERVL 1 475 0 6 705 261 83 0 0 chr17 15809167 15809203 -79463448 + (TTG)n Simple_repeat Simple_repeat 3 38 0 6 705 255 336 93 9 chr17 15809398 15809506 -79463145 + PB1D10 SINE Alu 1 117 0 6 705 342 0 0 0 chr17 15810125 15810163 -79462488 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 705 582 158 9 38 chr17 15810169 15810274 -79462377 - B1_Mur1 SINE Alu 0 149 48 6 705 267 299 114 0 chr17 15810298 15810482 -79462169 - L1M5 LINE L1 -696 5477 5273 6 705 961 114 8 242 chr17 15810546 15810610 -79462041 - B2_Mm2 SINE B2 -7 188 123 6 705 621 72 0 0 chr17 15810610 15810693 -79461958 + (TC)n Simple_repeat Simple_repeat 2 84 0 6 705 961 114 8 242 chr17 15810693 15810872 -79461779 - B2_Mm2 SINE B2 -73 122 2 6 705 3466 126 51 22 chr17 15811763 15812110 -79460541 - RMER6A LTR ERVK -113 643 294 6 705 804 115 0 0 chr17 15812110 15812232 -79460419 + (TTCC)n Simple_repeat Simple_repeat 3 124 0 6 705 3466 126 51 22 chr17 15812232 15812509 -79460142 - RMER6A LTR ERVK -463 293 1 6 705 1124 270 105 9 chr17 15812789 15813208 -79459443 - L1MB1 LINE L1 -121 6047 5589 6 705 243 0 0 0 chr17 15814758 15814785 -79457866 + (A)n Simple_repeat Simple_repeat 1 27 0 6 705 267 350 56 14 chr17 15814960 15815102 -79457549 - LTR81A LTR ERV1? -1062 288 141 6 705 248 102 20 0 chr17 15815548 15815597 -79457054 + (CCAA)n Simple_repeat Simple_repeat 2 51 0 6 705 736 214 21 0 chr17 15815803 15815943 -79456708 + B1_Mur2 SINE Alu 1 143 -6 6 705 234 0 0 0 chr17 15816808 15816834 -79455817 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 6 705 1056 53 90 0 chr17 15817452 15817585 -79455066 + B1_Mus1 SINE Alu 4 148 0 6 705 291 164 0 0 chr17 15817587 15817648 -79455003 + A-rich Low_complexity Low_complexity 1 61 0 6 705 830 168 73 0 chr17 15817672 15817809 -79454842 - B1_Mus1 SINE Alu 0 148 2 6 705 22 0 0 0 chr17 15818270 15818292 -79454359 + AT_rich Low_complexity Low_complexity 1 22 0 6 705 1038 252 79 18 chr17 15818611 15818939 -79453712 - MLT1B LTR MaLR -10 380 33 6 705 399 340 56 3 chr17 15818990 15819156 -79453495 - MER63B DNA AcHobo -12 424 257 6 705 372 294 36 18 chr17 15819648 15819759 -79452892 + RSINE1 SINE B4 2 114 -51 6 705 543 53 0 0 chr17 15819761 15819836 -79452815 + (CA)n Simple_repeat Simple_repeat 2 76 0 6 705 243 0 0 0 chr17 15820083 15820110 -79452541 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 705 202 62 0 59 chr17 15820364 15820398 -79452253 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 6 705 531 294 109 41 chr17 15820758 15820978 -79451673 + MLT1A0 LTR MaLR 131 365 0 6 705 246 176 0 0 chr17 15821021 15821072 -79451579 + CT-rich Low_complexity Low_complexity 2 52 0 6 705 1215 88 0 0 chr17 15821073 15821221 -79451430 - B1_Mus1 SINE Alu 0 148 1 6 705 2979 151 25 10 chr17 15821273 15821788 -79450863 + RLTR11A LTR ERVK 1 523 -5 6 705 287 163 0 0 chr17 15821794 15821843 -79450808 + ORR1D2 LTR MaLR 322 370 0 6 705 236 342 81 20 chr17 15822049 15822198 -79450453 - MER21B LTR ERV1 -409 454 297 6 705 295 277 0 67 chr17 15822415 15822504 -79450147 + MLT1A LTR MaLR 81 163 -211 6 705 230 197 15 29 chr17 15822602 15822670 -79449981 + MLT1A LTR MaLR 320 386 -22 6 705 600 240 52 44 chr17 15822941 15823024 -79449627 - B3A SINE B2 -62 136 52 6 705 3516 26 23 0 chr17 15823024 15823411 -79449240 - MTA_Mm LTR MaLR 0 396 1 6 705 600 240 52 44 chr17 15823411 15823462 -79449189 - B3A SINE B2 -147 51 1 6 705 444 104 0 0 chr17 15823808 15823875 -79448776 + (CA)n Simple_repeat Simple_repeat 2 68 0 6 705 273 253 22 33 chr17 15823954 15824044 -79448607 + MLT1A1 LTR MaLR 320 408 0 6 705 1398 82 22 16 chr17 15824734 15824919 -79447732 - B2_Mm2 SINE B2 -9 186 1 6 705 205 222 19 0 chr17 15825275 15825329 -79447322 + T-rich Low_complexity Low_complexity 1 55 0 6 705 595 214 247 6 chr17 15825335 15825509 -79447142 - B3 SINE B2 0 216 1 6 705 296 257 14 14 chr17 15825578 15825649 -79447002 + 7SK RNA RNA 162 232 -99 6 705 279 0 0 0 chr17 15825703 15825734 -79446917 + (TC)n Simple_repeat Simple_repeat 2 32 0 6 705 1024 45 8 0 chr17 15825734 15825866 -79446785 - B1_Mm SINE Alu -1 146 14 6 705 434 246 56 84 chr17 15825739 15825881 -79446770 - B4 SINE B4 -72 220 83 6 705 286 263 69 123 chr17 15825910 15826040 -79446611 + MT2B LTR ERVL 142 264 -337 6 705 955 39 92 0 chr17 15825944 15826074 -79446577 + B1_Mus1 SINE Alu 7 148 0 6 705 338 256 135 82 chr17 15825947 15826117 -79446534 + B4A SINE B4 94 272 -20 6 705 892 136 8 0 chr17 15826641 15826773 -79445878 - B1_Mus1 SINE Alu -12 136 4 6 705 240 185 0 0 chr17 15826779 15826833 -79445818 + (CA)n Simple_repeat Simple_repeat 1 54 0 6 705 324 119 0 0 chr17 15827213 15827272 -79445379 + (CAGA)n Simple_repeat Simple_repeat 4 62 0 6 705 466 138 173 9 chr17 15827272 15827382 -79445269 + B1_Mur2 SINE Alu 22 149 0 6 705 237 98 0 0 chr17 15827388 15827429 -79445222 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 705 435 109 0 0 chr17 15827705 15827769 -79444882 + B1_Mm SINE Alu 84 147 0 6 705 307 318 11 0 chr17 15827823 15827911 -79444740 + ID_B1 SINE B4 84 172 -52 6 705 697 206 15 0 chr17 15827985 15828116 -79444535 - B1_Mus2 SINE Alu 0 147 15 6 705 1699 26 11 0 chr17 15828354 15828544 -79444107 + B2_Mm1a SINE B2 2 193 0 6 705 2057 169 37 43 chr17 15828562 15828893 -79443758 + ORR1D1 LTR MaLR 1 331 -43 6 705 1242 21 7 27 chr17 15828893 15828906 -79443745 - B1_Mm SINE Alu 0 147 137 6 705 198 0 0 0 chr17 15828906 15828928 -79443723 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 6 705 1242 21 7 27 chr17 15828928 15829062 -79443589 - B1_Mm SINE Alu -11 136 3 6 705 2057 169 37 43 chr17 15829062 15829106 -79443545 + ORR1D1 LTR MaLR 332 374 0 6 705 1915 158 225 63 chr17 15829888 15830346 -79442305 + MT2A LTR ERVL 2 533 0 6 705 863 93 18 6 chr17 15831345 15831508 -79441143 + (CA)n Simple_repeat Simple_repeat 1 165 0 6 705 1614 208 26 35 chr17 15831636 15831975 -79440676 - ORR1D1 LTR MaLR -38 336 1 6 705 1276 290 77 42 chr17 15831975 15832659 -79439992 + L1MA4A LINE L1 5260 5939 -1705 6 705 305 216 0 19 chr17 15832908 15833012 -79439639 + (ATG)n Simple_repeat Simple_repeat 1 102 0 6 705 578 264 12 66 chr17 15833015 15833181 -79439470 - RSINE1 SINE B4 -6 159 3 6 705 717 160 72 51 chr17 15833316 15833454 -79439197 + RLTR17 LTR ERVK 552 692 0 6 705 389 310 109 10 chr17 15833476 15833678 -79438973 - L1ME2z LINE L1 -430 6014 5793 6 705 1159 58 43 0 chr17 15833726 15833865 -79438786 + B1_Mm SINE Alu 1 145 -2 6 705 556 241 21 28 chr17 15834148 15834289 -79438362 - ORR1D1 LTR MaLR -210 164 25 6 705 325 333 10 0 chr17 15834503 15834605 -79438046 + ID_B1 SINE B4 73 175 -49 6 705 439 248 59 0 chr17 15834517 15834635 -79438016 + PB1D7 SINE Alu 6 137 -13 6 705 1180 88 0 0 chr17 15834635 15834782 -79437869 + B1_Mus2 SINE Alu 1 147 0 6 705 341 295 107 0 chr17 15834782 15834794 -79437857 + B1_Mur4 SINE Alu 138 149 -1 6 705 531 293 59 18 chr17 15834807 15834977 -79437674 + B3A SINE B2 5 181 -17 6 705 738 282 72 100 chr17 15835062 15835452 -79437199 - MTE2a LTR MaLR 0 379 1 6 705 225 294 65 76 chr17 15835492 15835584 -79437067 + PB1D7 SINE Alu 19 109 -11 6 705 423 274 37 9 chr17 15835693 15835800 -79436851 + B3A SINE B2 2 111 -87 6 705 462 341 31 13 chr17 15835946 15836172 -79436479 + L2 LINE L2 1950 2179 -1240 6 705 400 263 19 34 chr17 15836248 15836383 -79436268 + MTE2a LTR MaLR 210 344 -35 6 705 1170 272 102 26 chr17 15836912 15837239 -79435412 + MTEb LTR MaLR 3 360 -19 6 705 1898 168 38 61 chr17 15837239 15837632 -79435019 - ORR1C2 LTR MaLR 0 384 1 6 705 1170 272 102 26 chr17 15837632 15837647 -79435004 + MTEb LTR MaLR 361 371 -8 6 705 264 59 0 0 chr17 15837709 15837743 -79434908 + (TTTTC)n Simple_repeat Simple_repeat 3 36 0 6 705 1253 48 7 0 chr17 15837770 15837915 -79434736 - B1_Mus2 SINE Alu 0 147 2 6 705 301 303 40 0 chr17 15838044 15838143 -79434508 + PB1 SINE Alu 17 119 -8 6 705 599 274 48 78 chr17 15838179 15838345 -79434306 + RSINE1 SINE B4 5 165 0 6 705 229 26 0 50 chr17 15838895 15838935 -79433716 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 7 705 1280 28 0 14 chr17 15838935 15839072 -79433579 - B1_Mus2 SINE Alu -10 137 1 7 705 192 40 0 0 chr17 15839360 15839385 -79433266 + (TGG)n Simple_repeat Simple_repeat 2 26 0 7 705 250 296 25 0 chr17 15839385 15839466 -79433185 - MTEa LTR MaLR -8 371 289 7 705 231 221 11 95 chr17 15839462 15839557 -79433094 - MTEa LTR MaLR -192 167 81 7 705 360 273 0 83 chr17 15839603 15839711 -79432940 - MTEa LTR MaLR -280 99 1 7 705 475 322 34 0 chr17 15839952 15840101 -79432550 + RSINE1 SINE B4 3 156 -9 7 705 676 134 0 30 chr17 15840453 15840584 -79432067 + CT-rich Low_complexity Low_complexity 2 128 0 7 705 1204 68 0 0 chr17 15840584 15840731 -79431920 - B1_Mus1 SINE Alu 0 148 2 7 705 228 188 31 124 chr17 15840866 15840885 -79431766 + MT2B2 LTR ERVL 153 240 -344 7 705 235 197 13 90 chr17 15840885 15840963 -79431688 + PB1D10 SINE Alu 11 82 -35 7 705 249 218 94 23 chr17 15841088 15841182 -79431469 + PB1D10 SINE Alu 9 125 -2 7 705 23 0 0 0 chr17 15841630 15841653 -79430998 + GC_rich Low_complexity Low_complexity 1 23 0 7 705 234 0 0 0 chr17 15841823 15841849 -79430802 + (CCCCG)n Simple_repeat Simple_repeat 4 29 0 7 705 26 30 0 0 chr17 15841865 15841898 -79430753 + GC_rich Low_complexity Low_complexity 1 33 0 7 705 210 271 14 48 chr17 15841914 15842061 -79430590 + (CGG)n Simple_repeat Simple_repeat 2 143 0 7 705 21 82 0 0 chr17 15842205 15842254 -79430397 + GC_rich Low_complexity Low_complexity 1 49 0 7 705 29 70 0 0 chr17 15842294 15842351 -79430300 + GC_rich Low_complexity Low_complexity 1 57 0 7 705 264 204 10 58 chr17 15842384 15842523 -79430128 + G-rich Low_complexity Low_complexity 1 132 0 7 705 25 0 0 0 chr17 15842546 15842571 -79430080 + GC_rich Low_complexity Low_complexity 1 25 0 7 705 261 0 0 0 chr17 15844226 15844255 -79428396 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 705 344 279 181 35 chr17 15844447 15844618 -79428033 - MER3 DNA MER1_type 0 209 14 7 705 192 40 0 0 chr17 15844644 15844669 -79427982 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 7 705 870 164 21 7 chr17 15845281 15845422 -79427229 + B1_Mur2 SINE Alu 1 143 -6 7 705 536 269 0 0 chr17 15845598 15845717 -79426934 - B1_Mur1 SINE Alu 0 149 31 7 705 720 233 150 20 chr17 15846798 15847052 -79425599 + Lx7 LINE L1 7131 7417 -279 7 705 342 67 0 0 chr17 15847063 15847108 -79425543 + (TCCC)n Simple_repeat Simple_repeat 4 48 0 7 705 460 203 85 47 chr17 15847223 15847352 -79425299 + B1_Mus2 SINE Alu 13 146 -1 7 705 859 214 44 24 chr17 15847862 15848068 -79424583 - URR1A DNA MER1_type 0 226 17 7 705 293 305 82 103 chr17 15848395 15848541 -79424110 + B4 SINE B4 77 219 -73 7 705 681 113 28 9 chr17 15848442 15848549 -79424102 + B1_Mur3 SINE Alu 41 149 0 7 705 23 33 0 0 chr17 15849258 15849288 -79423363 + AT_rich Low_complexity Low_complexity 1 30 0 7 705 325 223 92 87 chr17 15849294 15849442 -79423209 - B1_Mur1 SINE Alu -11 138 3 7 705 492 18 0 0 chr17 15849450 15849507 -79423144 + (TC)n Simple_repeat Simple_repeat 2 58 0 7 705 965 56 8 0 chr17 15849509 15849634 -79423017 - B1_Mus2 SINE Alu 0 147 22 7 705 517 268 109 11 chr17 15850139 15850313 -79422338 - B3A SINE B2 -7 191 1 7 705 405 241 183 28 chr17 15850354 15850567 -79422084 + B4A SINE B4 1 246 -46 7 705 521 227 21 1 chr17 15850643 15850762 -79421889 - B1_Mus2 SINE Alu -27 122 1 7 705 275 216 35 97 chr17 15850666 15850779 -79421872 - MT2B LTR ERVL -348 253 148 7 705 331 296 34 43 chr17 15850811 15851019 -79421632 - L1MC4a LINE L1 -1379 6503 6298 7 705 546 57 0 0 chr17 15851027 15851097 -79421554 + (CA)n Simple_repeat Simple_repeat 2 71 0 7 705 535 234 47 25 chr17 15852307 15852478 -79420173 - B3 SINE B2 -2 196 1 7 705 781 184 0 72 chr17 15852861 15852879 -79419772 - B1_Mur1 SINE Alu 0 149 137 7 705 189 0 0 0 chr17 15852879 15852900 -79419751 + (TTTG)n Simple_repeat Simple_repeat 1 21 0 7 705 781 184 0 72 chr17 15852900 15853033 -79419618 - B1_Mur1 SINE Alu -13 136 9 7 705 1083 167 98 0 chr17 15853448 15853652 -79418999 + URR1B DNA MER1_type 2 225 0 7 705 687 62 0 0 chr17 15853966 15854063 -79418588 + (TC)n Simple_repeat Simple_repeat 2 98 0 7 705 356 188 145 0 chr17 15854500 15854569 -79418082 - B1_Mur2 SINE Alu -33 116 38 7 705 1259 48 7 0 chr17 15854720 15854866 -79417785 + B1_Mus1 SINE Alu 2 148 0 7 705 476 189 177 16 chr17 15857280 15857404 -79415247 - URR1B DNA MER1_type -81 144 1 7 705 605 236 137 18 chr17 15857608 15857776 -79414875 - B3 SINE B2 -27 189 2 7 705 628 229 24 32 chr17 15857809 15857935 -79414716 + B1_Mur1 SINE Alu 2 126 -23 7 705 703 148 9 0 chr17 15857964 15858072 -79414579 + B1_Mur4 SINE Alu 7 115 -35 7 705 26 30 0 0 chr17 15858573 15858606 -79414045 + AT_rich Low_complexity Low_complexity 1 33 0 7 705 606 208 58 77 chr17 15858642 15858798 -79413853 + B4 SINE B4 71 223 -69 7 705 1095 58 0 0 chr17 15858663 15858801 -79413850 + B1_Mm SINE Alu 10 147 0 7 705 252 0 0 0 chr17 15858801 15858829 -79413822 + (A)n Simple_repeat Simple_repeat 1 28 0 7 705 325 256 88 64 chr17 15859340 15859511 -79413140 - L1MA6 LINE L1 -74 6226 6052 7 705 243 88 0 0 chr17 15859639 15859673 -79412978 + (CGGA)n Simple_repeat Simple_repeat 3 36 0 7 88 1137 8 56 0 chr17 15859676 15860072 -79412579 + (TGGA)n Simple_repeat Simple_repeat 1 418 0 7 706 290 282 236 24 chr17 15860127 15860254 -79412397 - ID_B1 SINE B4 -39 185 32 7 706 187 256 102 23 chr17 15860478 15860566 -79412085 + L2c LINE L2 3290 3384 -3 7 706 1814 21 0 0 chr17 15861086 15861279 -79411372 - B2_Mm1t SINE B2 0 193 1 7 706 671 164 40 73 chr17 15861581 15861732 -79410919 + B1_Mur4 SINE Alu 5 150 0 7 706 2443 107 3 9 chr17 15861752 15862081 -79410570 - ORR1A2 LTR MaLR 0 327 1 7 706 305 327 29 0 chr17 15863530 15863634 -79409017 + PB1D7 SINE Alu 12 118 -2 7 706 891 232 107 74 chr17 15863893 15864065 -79408586 - MTD LTR MaLR -20 399 213 7 706 1226 62 0 0 chr17 15864065 15864211 -79408440 - B1_Mus1 SINE Alu -2 146 1 7 706 891 232 107 74 chr17 15864211 15864401 -79408250 - MTD LTR MaLR -207 212 25 7 706 1276 232 83 26 chr17 15864660 15865010 -79407641 - ORR1D2 LTR MaLR 0 370 1 7 706 186 71 0 0 chr17 15865010 15865038 -79407613 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 706 180 0 0 0 chr17 15865240 15865260 -79407391 + (TTGTG)n Simple_repeat Simple_repeat 4 23 0 7 706 1028 92 28 0 chr17 15865267 15865408 -79407243 - B1_Mus2 SINE Alu -2 145 1 7 706 709 239 116 26 chr17 15866607 15866796 -79405855 + B3 SINE B2 1 206 -10 7 706 441 0 0 0 chr17 15867158 15867207 -79405444 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 7 706 26 0 0 0 chr17 15868210 15868236 -79404415 + AT_rich Low_complexity Low_complexity 1 26 0 7 706 458 227 23 78 chr17 15868471 15868600 -79404051 - RSINE1 SINE B4 0 165 44 7 706 201 118 39 19 chr17 15869295 15869347 -79403304 + A-rich Low_complexity Low_complexity 3 55 0 7 706 261 330 47 9 chr17 15869643 15869750 -79402901 - PB1D10 SINE Alu -3 114 4 7 706 22 0 0 0 chr17 15870864 15870886 -79401765 + AT_rich Low_complexity Low_complexity 1 22 0 7 706 456 200 0 0 chr17 15871711 15871816 -79400835 + CT-rich Low_complexity Low_complexity 1 105 0 7 706 294 206 0 0 chr17 15872423 15872486 -79400165 + (TA)n Simple_repeat Simple_repeat 1 63 0 7 706 312 217 17 0 chr17 15872990 15873050 -79399601 + RSINE1 SINE B4 9 69 -96 7 706 186 43 0 0 chr17 15873095 15873118 -79399533 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 7 706 311 345 0 0 chr17 15873228 15873312 -79399339 - PB1D10 SINE Alu -22 95 12 7 706 25 31 0 0 chr17 15873342 15873374 -79399277 + AT_rich Low_complexity Low_complexity 1 32 0 7 706 196 30 29 29 chr17 15873484 15873518 -79399133 + (TA)n Simple_repeat Simple_repeat 2 35 0 7 706 21 71 0 0 chr17 15874030 15874072 -79398579 + AT_rich Low_complexity Low_complexity 1 42 0 7 706 942 41 16 0 chr17 15874133 15874254 -79398397 - B1_Mm SINE Alu -24 123 1 7 706 568 264 157 39 chr17 15874454 15874765 -79397886 - MTD LTR MaLR -26 393 21 7 706 518 193 87 9 chr17 15875209 15875324 -79397327 - B1_Mus1 SINE Alu 0 148 25 7 706 297 192 0 0 chr17 15875848 15875900 -79396751 - B3 SINE B2 -12 204 153 7 706 226 270 68 0 chr17 15875919 15875993 -79396658 - MIR SINE MIR -102 160 82 7 706 241 239 0 56 chr17 15876196 15876267 -79396384 - B1F SINE Alu -8 141 59 7 706 219 186 0 0 chr17 15876324 15876367 -79396284 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 706 659 271 0 47 chr17 15876852 15877065 -79395586 - B3 SINE B2 -13 203 1 7 706 214 289 0 73 chr17 15877406 15877488 -79395163 + B1F SINE Alu 67 142 -7 7 706 306 0 0 0 chr17 15877671 15877705 -79394946 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 7 706 1171 90 0 13 chr17 15877710 15877868 -79394783 - B2_Mm2 SINE B2 -38 157 2 7 706 1088 64 29 0 chr17 15878830 15878970 -79393681 - B1_Mus1 SINE Alu 0 148 5 7 706 22 0 0 0 chr17 15879444 15879466 -79393185 + AT_rich Low_complexity Low_complexity 1 22 0 7 706 317 294 123 20 chr17 15880736 15880882 -79391769 - RSINE1 SINE B4 -3 162 2 7 706 423 316 9 0 chr17 15881352 15881466 -79391185 + B3A SINE B2 84 198 0 7 706 389 328 167 0 chr17 15881532 15881706 -79390945 - ID_B1 SINE B4 -21 203 1 7 706 224 217 141 28 chr17 15881716 15881787 -79390864 - PB1D10 SINE Alu -6 111 33 8 706 596 209 212 12 chr17 15881821 15881986 -79390665 + B3A SINE B2 1 198 0 8 706 1228 44 0 0 chr17 15882170 15882307 -79390344 + B1_Mus1 SINE Alu 2 138 -10 8 706 419 253 22 0 chr17 15882468 15882559 -79390092 + PB1D9 SINE Alu 2 94 -26 8 706 180 0 0 0 chr17 15882720 15882740 -79389911 + (T)n Simple_repeat Simple_repeat 1 20 0 8 706 295 320 13 0 chr17 15882740 15882818 -79389833 - ID2 SINE ID 0 83 5 8 706 225 94 0 0 chr17 15882979 15883011 -79389640 + (T)n Simple_repeat Simple_repeat 1 32 0 8 706 337 269 13 13 chr17 15883502 15883581 -79389070 + ID4_ SINE ID 2 80 -3 8 706 296 285 168 8 chr17 15883894 15884025 -79388626 - MER5A DNA MER1_type -7 182 31 8 706 621 219 139 0 chr17 15885482 15885633 -79387018 + B3 SINE B2 45 216 0 8 706 27 29 0 0 chr17 15885645 15885679 -79386972 + AT_rich Low_complexity Low_complexity 1 34 0 8 706 441 0 0 0 chr17 15887799 15887848 -79384803 + (TAA)n Simple_repeat Simple_repeat 3 51 0 8 706 25 51 0 0 chr17 15888228 15888267 -79384384 + AT_rich Low_complexity Low_complexity 1 39 0 8 706 309 295 25 74 chr17 15888267 15888324 -79384327 - PB1D10 SINE Alu 0 117 62 8 706 1585 58 5 0 chr17 15888324 15888514 -79384137 - B2_Mm1t SINE B2 -2 191 1 8 706 313 295 25 74 chr17 15888514 15888577 -79384074 - PB1D10 SINE Alu -56 61 3 8 706 201 273 220 64 chr17 15888697 15888838 -79383813 - MIR SINE MIR -15 247 85 8 706 393 272 274 3 chr17 15889583 15889871 -79382780 - L1M5 LINE L1 -2504 3642 3277 8 706 497 258 133 75 chr17 15889872 15890194 -79382457 - RLTR15 LTR ERVK -18 341 1 8 706 202 214 0 67 chr17 15890243 15890318 -79382333 + T-rich Low_complexity Low_complexity 2 71 0 8 706 207 209 0 0 chr17 15890876 15890919 -79381732 + A-rich Low_complexity Low_complexity 1 43 0 8 706 1094 76 0 0 chr17 15891574 15891718 -79380933 - B1_Mus2 SINE Alu -3 144 1 8 706 287 262 25 0 chr17 15892428 15892508 -79380143 + ID4 SINE ID 1 82 -1 8 706 24 53 0 0 chr17 15893063 15893101 -79379550 + AT_rich Low_complexity Low_complexity 1 38 0 8 706 514 230 26 9 chr17 15893260 15893374 -79379277 - PB1D10 SINE Alu -1 116 1 8 706 351 0 0 0 chr17 15893417 15893456 -79379195 + (TG)n Simple_repeat Simple_repeat 1 39 0 8 706 309 238 55 55 chr17 15893459 15893565 -79379086 - ID4 SINE ID -38 114 9 8 706 384 149 21 11 chr17 15893593 15893688 -79378963 + (TA)n Simple_repeat Simple_repeat 1 96 0 8 706 210 222 0 0 chr17 15896237 15896291 -79376360 + CT-rich Low_complexity Low_complexity 2 55 0 8 706 382 311 49 122 chr17 15896358 15896563 -79376088 - B4 SINE B4 0 292 103 8 706 246 241 77 57 chr17 15896681 15896785 -79375866 + B1F SINE Alu 20 120 0 8 706 459 111 19 0 chr17 15896804 15896891 -79375760 + B1_Mus1 SINE Alu 34 126 -23 8 706 310 292 48 86 chr17 15896967 15897072 -79375579 + B3 SINE B2 108 208 -8 8 706 21 36 0 0 chr17 15897576 15897604 -79375047 + AT_rich Low_complexity Low_complexity 1 28 0 8 706 726 210 102 10 chr17 15897675 15897872 -79374779 - B3 SINE B2 -1 215 1 8 706 734 195 91 6 chr17 15898752 15898927 -79373724 + B2_Mm2 SINE B2 6 195 0 8 706 396 0 0 0 chr17 15900291 15900335 -79372316 + (TC)n Simple_repeat Simple_repeat 1 44 0 8 706 255 170 0 0 chr17 15900389 15900436 -79372215 + CT-rich Low_complexity Low_complexity 2 48 0 8 706 272 113 38 0 chr17 15900436 15900489 -79372162 + (TTTA)n Simple_repeat Simple_repeat 3 57 0 8 706 495 48 0 0 chr17 15901254 15901316 -79371335 + (TA)n Simple_repeat Simple_repeat 1 62 0 8 706 249 263 118 0 chr17 15901648 15901724 -79370927 - PB1D10 SINE Alu -6 111 27 8 706 410 322 75 52 chr17 15902125 15902338 -79370313 - MER44D DNA MER2_type -466 239 22 8 706 335 323 168 29 chr17 15903037 15903174 -79369477 - RSINE1 SINE B4 -8 157 2 8 706 22 35 0 0 chr17 15903399 15903428 -79369223 + AT_rich Low_complexity Low_complexity 1 29 0 8 706 332 328 53 16 chr17 15903661 15903848 -79368803 + L1MC4a LINE L1 7376 7566 -476 8 706 1243 34 7 0 chr17 15903848 15903994 -79368657 + B1_Mus2 SINE Alu 1 147 0 8 706 332 324 44 7 chr17 15903994 15904018 -79368633 + L1MC4a LINE L1 7549 7577 -305 8 706 210 118 0 0 chr17 15904485 15904519 -79368132 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 8 706 255 255 126 45 chr17 15904777 15904791 -79367860 - B3A SINE B2 -78 120 1 8 706 325 261 10 52 chr17 15904791 15904888 -79367763 - B4A SINE B4 -199 93 1 8 706 365 276 108 18 chr17 15905262 15905428 -79367223 - Lx9 LINE L1 -507 7137 6957 8 706 1070 145 216 36 chr17 15909857 15910186 -79362465 - Lx9 LINE L1 -28 7616 7229 8 706 960 126 0 0 chr17 15910646 15910797 -79361854 + (TTCC)n Simple_repeat Simple_repeat 2 152 0 8 706 839 131 23 0 chr17 15910804 15910934 -79361717 - B1_Mur3 SINE Alu -8 141 9 8 706 408 300 162 27 chr17 15911204 15911567 -79361084 - L1MCc LINE L1 -1260 5681 5277 8 706 501 246 13 20 chr17 15911703 15911846 -79360805 - PB1D9 SINE Alu -5 144 1 8 706 336 296 95 8 chr17 15912132 15912258 -79360393 - L1MCc LINE L1 -6209 214 78 8 706 312 323 38 51 chr17 15912438 15912673 -79359978 - L1ME3 LINE L1 -109 6053 5822 8 706 337 298 148 14 chr17 15912715 15912870 -79359781 - PB1D10 SINE Alu -11 106 1 8 706 457 233 0 0 chr17 15912786 15912872 -79359779 - ID_B1 SINE B4 -59 165 80 8 706 372 43 0 0 chr17 15913077 15913123 -79359528 + (CA)n Simple_repeat Simple_repeat 1 46 0 8 706 245 51 26 0 chr17 15913123 15913162 -79359489 + (GA)n Simple_repeat Simple_repeat 1 40 0 8 706 333 0 0 0 chr17 15913352 15913389 -79359262 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 706 447 306 169 55 chr17 15913436 15914161 -79358490 - L1MA6 LINE L1 -206 6094 5272 8 706 3629 44 5 2 chr17 15914161 15914596 -79358055 - RLTR10C LTR ERVK 0 436 1 8 706 358 290 110 111 chr17 15914596 15915217 -79357434 - L1MA6 LINE L1 -870 5273 4654 8 706 816 268 29 5 chr17 15915241 15915447 -79357204 + B3 SINE B2 1 211 -5 8 706 847 264 67 5 chr17 15915542 15915736 -79356915 - B3 SINE B2 -10 206 1 8 706 1078 149 31 0 chr17 15915812 15916007 -79356644 - Lx LINE L1 -9 6645 6445 8 706 756 86 0 0 chr17 15916013 15916118 -79356533 + (TTTTC)n Simple_repeat Simple_repeat 4 108 0 8 706 7031 72 17 1 chr17 15916122 15916325 -79356326 - L1Md_F2 LINE L1 -17 6565 6353 8 706 324 0 0 0 chr17 15916325 15916361 -79356290 + (TG)n Simple_repeat Simple_repeat 1 36 0 8 706 25227 61 3 18 chr17 15916361 15920331 -79352320 - L1Md_F2 LINE L1 -230 6352 2443 8 706 474 18 0 0 chr17 15920362 15920417 -79352234 + (CA)n Simple_repeat Simple_repeat 2 56 0 8 706 1336 197 182 88 chr17 15920465 15920888 -79351763 + MT2A LTR ERVL 1 463 -70 8 706 244 295 24 71 chr17 15920868 15920952 -79351699 + B4A SINE B4 164 243 -49 8 706 221 0 35 0 chr17 15921189 15921218 -79351433 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 8 706 1090 70 0 0 chr17 15921227 15921369 -79351282 - B1_Mus1 SINE Alu -6 142 1 8 706 1213 192 122 48 chr17 15921535 15921847 -79350804 - ORR1D1 LTR MaLR -35 339 5 8 706 891 258 0 0 chr17 15921855 15922033 -79350618 - B3 SINE B2 -38 178 1 8 706 4077 126 70 58 chr17 15923059 15923876 -79348775 - Lx4A LINE L1 0 7058 6232 8 706 320 271 115 56 chr17 15924246 15924480 -79348171 - Charlie2b DNA MER1_type -1 2781 2534 8 706 254 295 72 54 chr17 15925136 15925247 -79347404 - HAL1 LINE L1 -1652 855 743 8 706 3178 108 21 6 chr17 15925389 15925857 -79346794 - Lx LINE L1 -6 6648 6174 8 706 1052 49 7 27 chr17 15925857 15926005 -79346646 + L1_Mus4 LINE L1 6040 6184 -452 8 706 563 297 122 16 chr17 15926403 15926656 -79345995 + RMER15 LTR ERVL 296 575 0 8 706 320 319 34 17 chr17 15926710 15926828 -79345823 - PB1D7 SINE Alu 0 120 1 8 706 393 316 10 0 chr17 15926734 15926832 -79345819 - ID_B1 SINE B4 -48 176 78 8 706 501 201 0 65 chr17 15926849 15927035 -79345616 + (CATA)n Simple_repeat Simple_repeat 4 177 0 8 706 288 282 22 37 chr17 15927415 15927551 -79345100 + MLT1A1 LTR MaLR 270 403 -5 8 706 342 275 133 27 chr17 15928088 15928211 -79344440 + B4A SINE B4 146 286 -6 8 706 210 150 0 0 chr17 15928361 15928401 -79344250 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 706 450 0 0 0 chr17 15928401 15928451 -79344200 + (GA)n Simple_repeat Simple_repeat 1 50 0 8 706 230 348 0 0 chr17 15928487 15928556 -79344095 - Tigger15a DNA TcMar -643 72 4 8 706 236 275 0 80 chr17 15929171 15929246 -79343405 + BC1_Mm scRNA scRNA 1 69 -83 8 706 1323 48 0 0 chr17 15929938 15930146 -79342505 + (TTC)n Simple_repeat Simple_repeat 1 208 0 8 706 345 159 0 0 chr17 15930146 15930209 -79342442 + CT-rich Low_complexity Low_complexity 2 64 0 8 706 8591 89 34 14 chr17 15930234 15931542 -79341109 - Lx3B LINE L1 0 6973 5639 8 706 28 29 0 0 chr17 15931551 15931586 -79341065 + AT_rich Low_complexity Low_complexity 1 35 0 8 706 877 222 6 17 chr17 15931844 15932023 -79340628 - B3 SINE B2 -13 203 27 8 706 22 0 0 0 chr17 15932035 15932057 -79340594 + AT_rich Low_complexity Low_complexity 1 22 0 8 706 22 0 0 0 chr17 15932115 15932137 -79340514 + AT_rich Low_complexity Low_complexity 1 22 0 8 706 1866 123 11 114 chr17 15932146 15932513 -79340138 + ORR1A4 LTR MaLR 1 329 0 8 706 522 161 99 25 chr17 15932833 15932954 -79339697 + RLTR15 LTR ERVK 3 132 -227 8 706 239 258 21 43 chr17 15932927 15933020 -79339631 + RLTR15 LTR ERVK 252 342 -17 8 706 1128 75 0 0 chr17 15933761 15933907 -79338744 + B1_Mus2 SINE Alu 2 147 0 8 706 232 194 16 0 chr17 15933907 15933969 -79338682 + (TA)n Simple_repeat Simple_repeat 2 64 0 9 706 316 310 113 119 chr17 15934056 15934349 -79338302 + MLT1G3 LTR MaLR 5 295 -300 9 706 1773 196 30 110 chr17 15934353 15934454 -79338197 + MTD LTR MaLR 13 113 -306 9 706 774 32 0 0 chr17 15934454 15934547 -79338104 + (TTTCC)n Simple_repeat Simple_repeat 3 95 0 9 706 1773 196 30 110 chr17 15934547 15934564 -79338087 + MTD LTR MaLR 114 114 -305 9 706 1563 52 0 5 chr17 15934564 15934757 -79337894 - B2_Mm2 SINE B2 -3 192 1 9 706 1773 196 30 110 chr17 15934757 15934984 -79337667 + MTD LTR MaLR 114 340 -79 9 706 1079 58 7 0 chr17 15934984 15935122 -79337529 + B1_Mus1 SINE Alu 1 139 -9 9 706 243 0 0 0 chr17 15935122 15935149 -79337502 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 706 1773 196 30 110 chr17 15935149 15935235 -79337416 + MTD LTR MaLR 341 411 -8 9 706 966 140 0 16 chr17 15935925 15936107 -79336544 + CT-rich Low_complexity Low_complexity 1 179 0 9 706 1435 230 42 11 chr17 15936170 15936531 -79336120 + Lx9 LINE L1 7103 7474 -170 9 706 1402 70 16 5 chr17 15936819 15937007 -79335644 + B2_Mm2 SINE B2 2 191 -4 9 706 608 278 5 32 chr17 15937447 15937633 -79335018 - B2_Mm2 SINE B2 -2 193 13 9 706 647 209 57 7 chr17 15937649 15937789 -79334862 - B1_Mur3 SINE Alu 0 149 3 9 706 562 259 28 104 chr17 15937810 15938021 -79334630 - B3A SINE B2 -3 195 1 9 706 1707 179 92 17 chr17 15939318 15939664 -79332987 - ORR1D1 LTR MaLR 0 374 3 9 706 908 18 9 0 chr17 15940038 15940148 -79332503 + (TTTCC)n Simple_repeat Simple_repeat 3 113 0 9 706 27 0 0 0 chr17 15943791 15943818 -79328833 + AT_rich Low_complexity Low_complexity 1 27 0 9 706 213 226 0 0 chr17 15944052 15944105 -79328546 + A-rich Low_complexity Low_complexity 1 53 0 9 706 28 0 0 0 chr17 15945628 15945656 -79326995 + AT_rich Low_complexity Low_complexity 1 28 0 9 706 1190 156 26 48 chr17 15947701 15947930 -79324721 - URR1B DNA MER1_type -1 224 1 9 706 1171 69 0 0 chr17 15950042 15950187 -79322464 + B1_Mus2 SINE Alu 1 145 -2 9 706 261 0 0 0 chr17 15950427 15950456 -79322195 + (CCCCAG)n Simple_repeat Simple_repeat 1 29 0 9 706 907 54 0 226 chr17 15952897 15953087 -79319564 + B1_Mus1 SINE Alu 2 148 0 9 706 270 0 0 0 chr17 15953087 15953117 -79319534 + (A)n Simple_repeat Simple_repeat 1 30 0 9 706 401 278 48 0 chr17 15953449 15953575 -79319076 - RSINE1 SINE B4 -31 134 3 9 706 31 0 0 0 chr17 15955698 15955729 -79316922 + AT_rich Low_complexity Low_complexity 1 31 0 9 706 27 0 0 0 chr17 15955764 15955791 -79316860 + AT_rich Low_complexity Low_complexity 1 27 0 9 706 336 48 0 0 chr17 15955945 15955987 -79316664 + (TA)n Simple_repeat Simple_repeat 2 43 0 9 706 255 31 0 0 chr17 15956013 15956045 -79316606 + (TG)n Simple_repeat Simple_repeat 1 32 0 9 706 625 261 30 18 chr17 15956056 15956224 -79316427 - B3 SINE B2 -46 170 1 9 706 297 0 0 0 chr17 15958936 15958969 -79313682 + (TG)n Simple_repeat Simple_repeat 1 33 0 9 706 1174 136 36 20 chr17 15959485 15959681 -79312970 - B3 SINE B2 -13 203 5 9 706 382 250 16 74 chr17 15959689 15959810 -79312841 - PB1D10 SINE Alu 0 117 4 9 706 180 111 0 0 chr17 15962998 15963025 -79309626 + (CAG)n Simple_repeat Simple_repeat 2 28 0 9 706 201 206 29 14 chr17 15963025 15963094 -79309557 + (CGG)n Simple_repeat Simple_repeat 2 71 0 9 706 1009 213 20 5 chr17 15965194 15965392 -79307259 + B3 SINE B2 1 201 -15 9 706 345 47 0 0 chr17 15965583 15965626 -79307025 + (TA)n Simple_repeat Simple_repeat 2 44 0 9 706 24 67 0 0 chr17 15968559 15968604 -79304047 + AT_rich Low_complexity Low_complexity 1 45 0 9 706 309 26 0 0 chr17 15969184 15969222 -79303429 + (CAAAC)n Simple_repeat Simple_repeat 2 39 0 9 706 342 0 0 0 chr17 15969285 15969323 -79303328 + (CAA)n Simple_repeat Simple_repeat 2 39 0 9 706 269 253 0 40 chr17 15970676 15970775 -79301876 - L1MA6 LINE L1 -28 6272 6178 9 706 412 227 100 0 chr17 15970815 15970925 -79301726 - L1MA5 LINE L1 -21 6279 6159 9 706 489 254 74 58 chr17 15971020 15971262 -79301389 - L1MA8 LINE L1 -6 6285 6040 9 706 11210 103 46 7 chr17 15971365 15973275 -79299376 - Lx2 LINE L1 0 6997 5031 9 706 729 63 0 0 chr17 15973275 15973370 -79299281 + (TTTC)n Simple_repeat Simple_repeat 2 96 0 9 706 1400 78 6 0 chr17 15973370 15973549 -79299102 - B2_Mm1a SINE B2 -12 181 2 9 706 11210 134 17 14 chr17 15973549 15974512 -79298139 - Lx2 LINE L1 -853 5030 4064 9 706 774 122 0 0 chr17 15974512 15974619 -79298032 - U6 snRNA snRNA 0 107 1 9 706 232 209 0 0 chr17 15974767 15974810 -79297841 + B4 SINE B4 31 73 -219 9 706 414 0 0 0 chr17 15974815 15974861 -79297790 + (CA)n Simple_repeat Simple_repeat 2 47 0 9 706 487 270 88 0 chr17 15975112 15975249 -79297402 + B3A SINE B2 1 149 -49 9 706 369 0 0 0 chr17 15975329 15975370 -79297281 + (TG)n Simple_repeat Simple_repeat 2 42 0 9 706 292 246 0 0 chr17 15975379 15975440 -79297211 - B4 SINE B4 -4 288 228 9 706 435 304 89 40 chr17 15975787 15975989 -79296662 - B4 SINE B4 -73 219 8 9 706 2512 75 0 0 chr17 15977206 15977527 -79295124 - L1Md_F2 LINE L1 -317 6265 5945 9 706 2312 86 0 0 chr17 15977527 15977829 -79294822 + L1_Mus1 LINE L1 6266 6567 0 9 706 1202 55 0 0 chr17 15977840 15977986 -79294665 + B1_Mus2 SINE Alu 2 147 0 9 706 494 108 12 0 chr17 15977996 15978079 -79294572 + (TA)n Simple_repeat Simple_repeat 2 85 0 9 706 1183 133 94 50 chr17 15978865 15978982 -79293669 + RLTR24 LTR ERV1 1 117 -412 9 706 2047 157 38 30 chr17 15978982 15979155 -79293496 - RMER10B LTR ERVL 0 398 221 9 706 348 24 0 0 chr17 15979155 15979196 -79293455 + (CAGAGA)n Simple_repeat Simple_repeat 1 41 0 9 706 2047 157 38 30 chr17 15979196 15979416 -79293235 - RMER10B LTR ERVL -178 220 2 9 706 1183 133 94 50 chr17 15979416 15979504 -79293147 + RLTR24 LTR ERV1 118 206 -323 9 706 723 272 67 29 chr17 15979504 15979848 -79292803 + RLTR15 LTR ERVK 3 359 0 9 706 1183 133 94 50 chr17 15979848 15979918 -79292733 + RLTR24 LTR ERV1 207 289 -240 9 706 255 132 0 0 chr17 15979918 15979956 -79292695 + RLTR24 LTR ERV1 221 258 -271 9 706 255 274 119 28 chr17 15980166 15980275 -79292376 + PB1D9 SINE Alu 1 119 -1 9 706 1757 176 35 186 chr17 15980659 15980787 -79291864 - Lx7 LINE L1 0 7696 7573 9 706 1054 93 0 0 chr17 15980787 15980926 -79291725 + B1_Mus1 SINE Alu 1 139 -9 9 706 1757 176 35 186 chr17 15980926 15981377 -79291274 - Lx7 LINE L1 -124 7572 7205 9 706 1888 107 54 72 chr17 15981378 15981710 -79290941 + ORR1A3 LTR MaLR 1 326 0 9 706 1180 50 0 0 chr17 15981718 15981857 -79290794 + B1_Mus1 SINE Alu 2 140 -8 9 706 360 0 0 0 chr17 15981857 15981897 -79290754 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 9 706 1157 143 30 0 chr17 15981901 15982104 -79290547 + ORR1A3-int LTR MaLR 1 209 -1300 9 706 670 62 10 40 chr17 15982104 15982205 -79290446 + Lx4A LINE L1 5745 5842 -1216 9 706 1690 193 91 5 chr17 15983764 15984170 -79288481 + Lx5 LINE L1 5777 6246 -804 9 706 409 262 19 0 chr17 15984170 15984277 -79288374 - Lx7 LINE L1 -1332 6364 6256 9 706 4528 174 30 19 chr17 15984281 15985781 -79286870 - L1_Mur3 LINE L1 -4048 1832 314 9 706 1604 218 50 14 chr17 15985783 15986146 -79286505 - RLTR30 LTR ERV1 -3 376 1 9 706 608 210 184 47 chr17 15986164 15986354 -79286297 - L1_Mur3 LINE L1 -7206 522 307 9 706 35 41 0 0 chr17 15986456 15986505 -79286146 + AT_rich Low_complexity Low_complexity 1 49 0 9 706 27 0 0 0 chr17 15986637 15986664 -79285987 + AT_rich Low_complexity Low_complexity 1 27 0 9 706 1306 105 16 0 chr17 15986952 15987142 -79285509 + B2_Mm1a SINE B2 1 193 0 9 706 405 0 0 0 chr17 15987254 15987299 -79285352 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 9 706 321 323 11 0 chr17 15987313 15987406 -79285245 - RSINE1 SINE B4 -42 123 30 9 706 649 155 16 0 chr17 15988047 15988176 -79284475 + CT-rich Low_complexity Low_complexity 2 132 0 9 706 1044 146 96 0 chr17 15988177 15988376 -79284275 - Lx3C LINE L1 0 6976 6759 9 706 1151 308 47 63 chr17 15988492 15988560 -79284091 - L1MA6 LINE L1 -274 6023 5959 9 706 762 43 0 0 chr17 15988560 15988654 -79283997 + (TG)n Simple_repeat Simple_repeat 1 94 0 9 706 432 0 0 0 chr17 15988654 15988701 -79283950 + (GA)n Simple_repeat Simple_repeat 1 48 0 9 706 1287 294 37 61 chr17 15988701 15989050 -79283601 - L1MA6 LINE L1 -339 5958 5600 9 706 914 235 30 5 chr17 15989050 15989251 -79283400 - B3 SINE B2 -10 206 1 9 706 1287 307 41 62 chr17 15989251 15989803 -79282848 - L1MA6 LINE L1 -701 5599 4999 9 706 230 0 33 0 chr17 15989803 15989833 -79282818 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 9 706 1201 321 42 61 chr17 15989833 15989994 -79282657 - L1MA6 LINE L1 -849 4998 4839 9 706 285 302 73 0 chr17 15990039 15990135 -79282516 + L1M2 LINE L1 4724 4826 -1317 9 706 234 0 0 0 chr17 15990292 15990318 -79282333 + (T)n Simple_repeat Simple_repeat 1 26 0 9 706 350 273 14 7 chr17 15990357 15990497 -79282154 - HAL1-2a_MD LINE L1 -537 2487 2347 9 706 26 0 0 0 chr17 15990743 15990769 -79281882 + AT_rich Low_complexity Low_complexity 1 26 0 9 707 504 247 0 0 chr17 15993246 15993527 -79279124 + (TG)n Simple_repeat Simple_repeat 1 281 0 9 707 253 242 30 0 chr17 15993663 15993729 -79278922 + ID4 SINE ID 3 70 -13 9 707 3479 172 104 28 chr17 15994625 15995235 -79277416 + Lx9 LINE L1 6796 7418 -226 9 707 369 0 0 0 chr17 15995235 15995276 -79277375 + (CA)n Simple_repeat Simple_repeat 2 42 0 9 707 3479 172 104 28 chr17 15995276 15995454 -79277197 + Lx9 LINE L1 7419 7643 -1 9 707 420 250 83 119 chr17 15995504 15995672 -79276979 + RSINE1 SINE B4 4 165 0 9 707 1154 65 0 0 chr17 15995867 15996006 -79276645 + B1_Mus1 SINE Alu 1 139 -9 9 707 234 0 0 0 chr17 15996006 15996032 -79276619 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 9 707 414 290 65 58 chr17 15996631 15996663 -79275988 + RSINE1 SINE B4 11 42 -123 9 707 234 0 0 0 chr17 15996663 15996689 -79275962 + (TA)n Simple_repeat Simple_repeat 2 27 0 9 707 414 290 65 58 chr17 15996689 15996810 -79275841 + RSINE1 SINE B4 43 165 0 9 707 281 149 37 18 chr17 15996831 15996940 -79275711 + (CAGA)n Simple_repeat Simple_repeat 4 114 0 9 707 446 278 4 30 chr17 15997343 15997509 -79275142 - MLT1J1 LTR MaLR -239 172 23 9 707 2023 188 35 10 chr17 15997698 15998177 -79274474 + Lx4B LINE L1 6410 6921 -79 9 707 198 0 0 0 chr17 15998191 15998213 -79274438 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 9 707 447 313 0 58 chr17 15998233 15998372 -79274279 + RSINE1 SINE B4 35 165 0 1 707 394 122 0 48 chr17 15998813 15998916 -79273735 + (CAAA)n Simple_repeat Simple_repeat 3 100 0 1 707 451 274 32 58 chr17 16000051 16000206 -79272445 - RSINE1 SINE B4 -11 154 4 1 707 201 39 0 0 chr17 16000505 16000531 -79272120 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 707 183 42 0 0 chr17 16000535 16000559 -79272092 + (CCCCCT)n Simple_repeat Simple_repeat 1 24 0 3 707 785 134 0 0 chr17 16000560 16000694 -79271957 - Lx LINE L1 -101 6553 6420 4 707 4116 51 6 2 chr17 16000707 16001221 -79271430 - L1Md_F2 LINE L1 0 6582 6067 5 707 319 237 39 13 chr17 16003181 16003258 -79269393 + ID4 SINE ID 2 80 -3 6 707 738 196 0 0 chr17 16004687 16004909 -79267742 + (TG)n Simple_repeat Simple_repeat 1 222 0 7 707 330 318 56 22 chr17 16005090 16005270 -79267381 + RMER15-int LTR ERVL 4281 4466 -533 8 707 1834 164 6 20 chr17 16005453 16005796 -79266855 + RLTR15 LTR ERVK 1 338 -21 9 707 541 328 88 3 chr17 16005815 16006109 -79266542 + Lx8 LINE L1 6790 7108 -365 1 707 922 162 115 5 chr17 16006312 16006504 -79266147 + B3 SINE B2 1 213 -3 1 707 244 312 82 14 chr17 16006534 16006680 -79265971 - Charlie10 DNA MER1_type -2004 818 663 1 707 1279 27 0 0 chr17 16006963 16007110 -79265541 - B1_Mm SINE Alu 0 147 1 1 707 604 313 93 44 chr17 16007151 16007355 -79265296 + ID_B1 SINE B4 6 219 -5 1 707 21 0 0 0 chr17 16007581 16007602 -79265049 + AT_rich Low_complexity Low_complexity 1 21 0 1 707 229 278 37 0 chr17 16008192 16008246 -79264405 + tRNA-Ala-GCY_ tRNA tRNA 12 67 -8 1 707 363 218 79 194 chr17 16008257 16008422 -79264229 + RMER19C LTR ERVK 143 288 -449 1 707 767 175 70 0 chr17 16008442 16008585 -79264066 + RMER19C LTR ERVK 457 609 -2 1 707 546 78 33 150 chr17 16009888 16010008 -79262643 + L1_Mus4 LINE L1 6160 6265 -371 1 707 526 105 19 19 chr17 16010012 16010119 -79262532 + Lx LINE L1 6547 6653 -1 1 707 798 285 65 23 chr17 16010727 16010989 -79261662 + B4A SINE B4 5 277 -15 2 707 191 32 65 0 chr17 16012925 16012956 -79259695 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 2 707 252 0 0 0 chr17 16013212 16013240 -79259411 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 2 707 806 133 94 0 chr17 16013255 16013383 -79259268 - B2_Mm2 SINE B2 -55 140 1 2 707 683 286 14 32 chr17 16013592 16013812 -79258839 - B3 SINE B2 0 216 1 2 707 561 327 26 47 chr17 16014405 16014639 -79258012 + Lx8 LINE L1 6668 6896 -577 2 707 2164 159 68 15 chr17 16014669 16015064 -79257587 + MTC LTR MaLR 6 421 0 2 707 983 169 54 11 chr17 16015063 16015249 -79257402 + MTC-int LTR MaLR 2 195 -1063 2 707 1380 164 126 28 chr17 16015250 16015608 -79257043 + MTC-int LTR MaLR 866 1258 0 2 707 1890 152 111 39 chr17 16015608 16015997 -79256654 + MTC LTR MaLR 1 417 -4 2 707 496 264 77 0 chr17 16016003 16016158 -79256493 + Lx8 LINE L1 6923 7089 -384 2 707 257 226 0 0 chr17 16016163 16016216 -79256435 + Lx8 LINE L1 7201 7253 -220 2 707 3064 197 51 12 chr17 16016258 16017357 -79255294 - L1_Mur3 LINE L1 -3888 1992 846 2 707 2414 84 9 0 chr17 16017560 16017881 -79254770 + ORR1A2 LTR MaLR 3 326 -1 2 707 29 28 0 0 chr17 16018343 16018379 -79254272 + AT_rich Low_complexity Low_complexity 1 36 0 2 707 746 47 0 0 chr17 16018394 16018501 -79254150 - L1Md_T LINE L1 0 6582 6476 3 707 231 231 103 0 chr17 16018696 16018774 -79253877 - L1_Mur3 LINE L1 -6897 831 746 2 707 345 287 73 9 chr17 16018895 16019004 -79253647 - B1F1 SINE Alu -8 141 26 3 707 2545 195 54 7 chr17 16020520 16021252 -79251399 - Lx4B LINE L1 -6 6994 6211 3 707 270 244 8 0 chr17 16022538 16022665 -79249986 + CT-rich Low_complexity Low_complexity 1 128 0 3 707 684 219 8 0 chr17 16022666 16022794 -79249857 - B1_Mus2 SINE Alu -14 133 5 3 707 1432 228 162 15 chr17 16023667 16023707 -79248944 - MT2A LTR ERVL 0 533 495 3 707 207 100 0 0 chr17 16023707 16023737 -79248914 + (TATG)n Simple_repeat Simple_repeat 4 33 0 3 707 635 70 17 26 chr17 16023738 16023855 -79248796 + (TCTA)n Simple_repeat Simple_repeat 3 118 0 3 707 1432 228 162 15 chr17 16023855 16024275 -79248376 - MT2A LTR ERVL -39 494 3 3 707 233 333 83 0 chr17 16024361 16024457 -79248194 + MLT1K LTR MaLR 166 269 -326 3 707 5202 231 80 16 chr17 16024796 16026284 -79246367 + Lx7 LINE L1 5775 7358 -338 3 707 309 121 0 0 chr17 16026325 16026353 -79246298 + (A)n Simple_repeat Simple_repeat 1 28 0 4 707 1160 42 42 0 chr17 16026353 16026495 -79246156 + B1_Mus1 SINE Alu 1 148 0 4 707 309 121 0 0 chr17 16026495 16026524 -79246127 + (A)n Simple_repeat Simple_repeat 1 29 0 4 707 714 266 25 25 chr17 16026580 16026777 -79245874 + B3A SINE B2 2 198 0 4 707 306 107 0 0 chr17 16029236 16029292 -79243359 + (CAGG)n Simple_repeat Simple_repeat 1 56 0 4 707 21 0 0 0 chr17 16030271 16030292 -79242359 + AT_rich Low_complexity Low_complexity 1 21 0 4 707 860 123 0 0 chr17 16030515 16030669 -79241982 + MYSERV16_I-int LTR ERVK 1140 1293 -1033 4 707 3558 42 2 0 chr17 16030669 16031100 -79241551 + RLTR1C LTR ERV1 72 503 0 4 707 270 0 0 0 chr17 16031150 16031180 -79241471 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 707 1523 128 81 0 chr17 16031180 16031477 -79241174 + MYSERV16_I-int LTR ERVK 2005 2325 -1 4 707 3022 161 32 29 chr17 16031477 16031688 -79240963 + RLTR20B2 LTR ERVK 1 208 -352 4 707 3170 61 5 2 chr17 16031688 16032083 -79240568 - MTA_Mm LTR MaLR 0 396 1 4 707 3022 161 32 29 chr17 16032083 16032427 -79240224 + RLTR20B2 LTR ERVK 209 558 -2 4 707 44 20 0 0 chr17 16032427 16032478 -79240173 + AT_rich Low_complexity Low_complexity 1 51 0 5 707 249 331 49 49 chr17 16033389 16033551 -79239100 + MER53 DNA hAT 25 186 -7 5 707 261 0 0 0 chr17 16033728 16033757 -79238894 + (TC)n Simple_repeat Simple_repeat 2 30 0 5 707 7296 43 2 3 chr17 16034456 16035410 -79237241 - L1Md_A LINE L1 0 6582 5665 5 707 441 0 0 0 chr17 16036840 16036889 -79235762 + (TTCC)n Simple_repeat Simple_repeat 4 52 0 5 707 1043 74 30 0 chr17 16036921 16037200 -79235451 + (TCTA)n Simple_repeat Simple_repeat 1 287 0 5 707 841 253 35 72 chr17 16037477 16037767 -79234884 + RLTR20D LTR ERVK 1 279 -289 5 707 580 291 6 12 chr17 16037752 16037912 -79234739 + RLTR20D LTR ERVK 411 569 -9 5 707 280 388 79 30 chr17 16038027 16038130 -79234521 + LTR16E2 LTR ERVL 203 305 -263 5 707 383 90 51 0 chr17 16038130 16038208 -79234443 + (TCTA)n Simple_repeat Simple_repeat 1 82 0 5 707 280 388 79 30 chr17 16038208 16038269 -79234382 + LTR16E2 LTR ERVL 306 375 -193 5 707 1408 70 11 0 chr17 16038315 16038501 -79234150 - B2_Mm1t SINE B2 -4 189 2 5 707 295 242 76 0 chr17 16038575 16038641 -79234010 - B2_Mm2 SINE B2 -124 71 1 6 707 348 24 0 0 chr17 16038908 16038949 -79233702 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 707 483 174 398 0 chr17 16042004 16042165 -79230486 + URR1B DNA MER1_type 1 225 0 6 707 308 96 0 37 chr17 16043380 16043434 -79229217 + (TTA)n Simple_repeat Simple_repeat 2 53 0 6 707 571 130 0 18 chr17 16043524 16043634 -79229017 + L1_Mur2 LINE L1 5296 5403 -474 6 707 3035 101 26 15 chr17 16043797 16044260 -79228391 + L1_Mur2 LINE L1 5410 5877 0 6 707 2158 121 3 0 chr17 16044280 16044593 -79228058 - ORR1A3 LTR MaLR -8 318 5 6 707 1344 197 39 28 chr17 16044620 16044975 -79227676 + RLTR10D LTR ERVK 1 359 0 6 707 271 160 0 145 chr17 16046034 16046151 -79226500 + L1_Mur2 LINE L1 3068 3167 -2710 6 707 3406 72 2 44 chr17 16046181 16046659 -79225992 - L1_Mus2 LINE L1 0 6566 6109 6 707 498 70 0 4 chr17 16046659 16046734 -79225917 + L1_Mus2 LINE L1 6043 6114 -453 6 707 2446 116 13 3 chr17 16046741 16047121 -79225530 - Lx LINE L1 -2 6652 6269 6 707 22 0 0 0 chr17 16047243 16047265 -79225386 + AT_rich Low_complexity Low_complexity 1 22 0 7 707 615 197 0 0 chr17 16047660 16047949 -79224702 + (CA)n Simple_repeat Simple_repeat 1 289 0 7 707 230 176 28 56 chr17 16047950 16048022 -79224629 + (CAGA)n Simple_repeat Simple_repeat 2 71 0 7 707 382 203 8 8 chr17 16048022 16048156 -79224495 + (CA)n Simple_repeat Simple_repeat 2 135 0 7 707 868 184 18 6 chr17 16048616 16048780 -79223871 + ORR1C2 LTR MaLR 219 384 0 7 707 4293 231 47 16 chr17 16048780 16049825 -79222826 + ORR1C2-int LTR MaLR 1 1587 -205 7 707 2550 23 0 0 chr17 16049825 16050135 -79222516 - L1Md_F2 LINE L1 -343 5540 5231 7 707 333 26 0 0 chr17 16050134 16050173 -79222478 + L1Md_F2 LINE L1 5548 5586 -297 7 707 8349 36 1 0 chr17 16050173 16051164 -79221487 + L1Md_F2 LINE L1 5587 6578 -4 7 707 1371 157 92 24 chr17 16051180 16051474 -79221177 + ORR1C1-int LTR MaLR 1196 1509 0 7 707 1207 174 75 184 chr17 16051476 16051877 -79220774 + ORR1C1 LTR MaLR 21 377 -1 7 707 470 274 113 0 chr17 16052294 16052418 -79220233 - ID_B1 SINE B4 -1 223 86 7 707 247 306 0 0 chr17 16052501 16052550 -79220101 - Alu_5 SINE Alu -125 50 2 7 707 697 197 33 17 chr17 16052748 16052909 -79219742 + B3 SINE B2 15 178 -17 7 707 453 220 42 16 chr17 16054648 16054770 -79217881 + PB1D7 SINE Alu 2 120 0 8 707 216 146 11 109 chr17 16054771 16054863 -79217788 + A-rich Low_complexity Low_complexity 3 85 0 8 707 3960 209 69 35 chr17 16054937 16056194 -79216457 - RMER1A Other Other -1 1029 1 8 707 468 0 0 0 chr17 16056194 16056246 -79216405 + (TG)n Simple_repeat Simple_repeat 2 53 0 8 707 377 264 0 140 chr17 16056246 16056315 -79216336 - RMER1B Other Other -609 457 393 8 707 250 289 49 60 chr17 16056655 16056839 -79215812 - L1MC4 LINE L1 -669 7373 7192 8 707 2775 174 101 2 chr17 16058359 16058882 -79213769 + RMER15 LTR ERVL 1 575 0 8 707 799 251 94 50 chr17 16058890 16059167 -79213484 - B4A SINE B4 -3 289 1 8 707 196 325 167 45 chr17 16060391 16060523 -79212128 + MIRb SINE MIR 105 252 -16 8 707 443 45 0 0 chr17 16061032 16061099 -79211552 - L1_Mus3 LINE L1 0 6638 6572 8 707 329 200 221 71 chr17 16061628 16061768 -79210883 - L1_Mur3 LINE L1 -7290 422 262 8 707 198 118 0 0 chr17 16062248 16062282 -79210369 + (TTTC)n Simple_repeat Simple_repeat 2 35 0 9 707 503 305 53 0 chr17 16062562 16062713 -79209938 + RSINE1 SINE B4 3 161 -4 9 707 201 74 0 0 chr17 16062736 16062763 -79209888 + (TC)n Simple_repeat Simple_repeat 1 27 0 9 707 540 126 0 0 chr17 16062772 16062859 -79209792 + (TA)n Simple_repeat Simple_repeat 1 87 0 9 707 310 163 18 0 chr17 16062906 16062977 -79209674 + B3 SINE B2 2 73 -125 9 707 3279 200 61 14 chr17 16062986 16063720 -79208931 + Lx7 LINE L1 6268 7036 -660 9 707 4264 168 66 81 chr17 16063723 16064615 -79208036 - RMER19B LTR ERVK -23 879 1 9 707 838 238 46 28 chr17 16064616 16064832 -79207819 + Lx7 LINE L1 7033 7252 -444 9 707 2336 69 119 11 chr17 16064832 16065184 -79207467 - RLTR10 LTR ERVK 0 390 1 9 707 8239 21 5 0 chr17 16065186 16066174 -79206477 - RLTR10-int LTR ERVK -3 1984 992 9 707 391 282 28 28 chr17 16066257 16066439 -79206212 - RLTR10-int LTR ERVK -5987 1594 1413 9 707 318 321 19 19 chr17 16066501 16066660 -79205991 - IAP-d-int LTR ERVK -2848 3694 3536 9 707 2516 45 54 0 chr17 16066780 16067232 -79205419 - RLTR10-int LTR ERVK -1130 857 302 9 707 574 110 284 0 chr17 16067232 16067359 -79205292 - RLTR10 LTR ERVK 0 411 249 9 707 717 35 0 0 chr17 16067358 16067444 -79205207 - RLTR10 LTR ERVK -304 86 1 9 707 763 230 21 21 chr17 16067444 16067635 -79205016 + Lx7 LINE L1 7247 7437 -259 9 707 1125 243 69 159 chr17 16068674 16069257 -79203394 - MT2A LTR ERVL -3 530 1 1 707 6444 25 0 8 chr17 16069370 16070131 -79202520 - L1Md_F3 LINE L1 0 6584 5830 1 707 13273 47 5 0 chr17 16070131 16071855 -79200796 + L1Md_F3 LINE L1 4036 5767 -116 1 707 1397 227 102 27 chr17 16071870 16072358 -79200293 - Lx4B LINE L1 -1 7057 6533 1 707 465 136 0 0 chr17 16072403 16072484 -79200167 - L1_Mus2 LINE L1 0 6566 6486 1 707 1104 88 0 0 chr17 16073098 16073245 -79199406 - B1_Mus2 SINE Alu 0 147 1 1 707 195 100 0 0 chr17 16073791 16073821 -79198830 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 707 332 381 52 7 chr17 16074559 16074694 -79197957 - B1F SINE Alu -8 141 1 1 707 238 269 168 42 chr17 16074788 16074955 -79197696 - ORR1E LTR MaLR -7 352 165 1 707 535 318 22 28 chr17 16074982 16075160 -79197491 + MT2A LTR ERVL 3 179 -354 1 707 270 0 0 0 chr17 16075683 16075713 -79196938 + (T)n Simple_repeat Simple_repeat 1 30 0 1 707 536 171 35 21 chr17 16076491 16076634 -79196017 + CT-rich Low_complexity Low_complexity 4 148 0 1 707 252 247 0 0 chr17 16077265 16077350 -79195301 + T-rich Low_complexity Low_complexity 1 85 0 1 707 262 175 160 30 chr17 16077351 16077451 -79195200 + Lx8 LINE L1 7353 7465 -8 1 707 4596 40 0 11 chr17 16078358 16078914 -79193737 + L1Md_F2 LINE L1 6021 6570 -12 1 707 1284 188 238 0 chr17 16080210 16080513 -79192138 - ORR1C1 LTR MaLR 0 378 4 1 707 1027 136 77 6 chr17 16081737 16081907 -79190744 - URR1B DNA MER1_type -43 182 1 1 707 281 89 22 0 chr17 16082592 16082637 -79190014 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 707 184 299 200 25 chr17 16084122 16084242 -79188409 + MIR SINE MIR 7 147 -115 1 707 2527 200 91 30 chr17 16084421 16084439 -79188212 - RMER15 LTR ERVL -16 559 535 1 707 432 0 0 0 chr17 16084439 16084487 -79188164 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 707 2527 200 91 30 chr17 16084487 16084576 -79188075 - RMER15 LTR ERVL -41 534 450 1 707 1254 114 0 25 chr17 16084576 16084774 -79187877 - B2_Mm2 SINE B2 -1 194 2 1 707 2527 200 91 30 chr17 16084774 16085192 -79187459 - RMER15 LTR ERVL -126 449 2 1 707 204 335 170 0 chr17 16086673 16086806 -79185845 + MIRc SINE MIR 16 177 -99 1 707 245 372 74 0 chr17 16088017 16088138 -79184513 + MLT1A1 LTR MaLR 265 394 -14 1 707 24 0 0 0 chr17 16088278 16088302 -79184349 + AT_rich Low_complexity Low_complexity 1 24 0 1 707 223 250 114 48 chr17 16088725 16088830 -79183821 + MIRm SINE MIR 165 276 0 1 707 285 324 0 0 chr17 16088848 16088922 -79183729 - L3 LINE CR1 -105 4384 4311 1 707 510 275 67 57 chr17 16089471 16089664 -79182987 - MER77 LTR ERVL -7 600 406 1 707 2971 169 71 7 chr17 16089724 16090274 -79182377 + RMER6D LTR ERVK 71 655 -65 1 707 965 82 82 0 chr17 16090447 16090582 -79182069 + B1_Mm SINE Alu 1 146 -1 1 707 294 20 39 39 chr17 16090583 16090635 -79182016 + (CAAAAA)n Simple_repeat Simple_repeat 3 54 0 1 707 381 289 155 9 chr17 16091301 16091514 -79181137 + Lx9 LINE L1 7357 7600 -44 1 707 287 198 78 44 chr17 16092846 16092936 -79179715 + MTEb LTR MaLR 287 379 0 1 707 363 308 68 0 chr17 16093520 16093637 -79179014 + L1MEg LINE L1 788 912 -5330 1 707 910 268 81 33 chr17 16093655 16094014 -79178637 + Lx8 LINE L1 7077 7452 -21 1 707 301 291 146 0 chr17 16094500 16094651 -79178000 + L1MEg LINE L1 2473 2645 -3501 1 707 512 306 15 15 chr17 16094661 16094797 -79177854 - ID_B1 SINE B4 -5 219 84 1 707 225 284 142 0 chr17 16094909 16095071 -79177580 + L1MEg LINE L1 2760 2944 -3202 1 707 7264 78 4 14 chr17 16095244 16096055 -79176596 - Lx LINE L1 -70 6584 5787 1 707 189 0 0 0 chr17 16096055 16096076 -79176575 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 707 7264 156 34 4 chr17 16096076 16097318 -79175333 - Lx LINE L1 -97 5786 4504 1 707 22 35 0 0 chr17 16097570 16097599 -79175052 + AT_rich Low_complexity Low_complexity 1 29 0 1 707 21 36 0 0 chr17 16097765 16097793 -79174858 + AT_rich Low_complexity Low_complexity 1 28 0 1 707 492 339 161 42 chr17 16097890 16098201 -79174450 - ORR1E LTR MaLR -11 348 1 1 707 472 335 54 6 chr17 16098201 16098357 -79174294 - MTE-int LTR MaLR -270 1310 1147 1 707 303 28 0 0 chr17 16098387 16098423 -79174228 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 707 570 189 0 0 chr17 16098423 16098603 -79174048 + GA-rich Low_complexity Low_complexity 1 180 0 1 707 483 206 0 0 chr17 16098615 16098795 -79173856 + GA-rich Low_complexity Low_complexity 1 180 0 1 707 287 306 129 0 chr17 16099382 16099467 -79173184 + B1F1 SINE Alu 1 96 -53 1 707 269 237 186 23 chr17 16099530 16099707 -79172944 - Lx8 LINE L1 -4 7469 7264 1 707 8500 115 36 7 chr17 16099737 16101334 -79171317 - Lx2 LINE L1 0 6997 5352 1 707 996 72 0 0 chr17 16102408 16102546 -79170105 - L1Md_F2 LINE L1 -12 6570 6433 1 707 234 132 60 0 chr17 16102732 16102815 -79169836 + CT-rich Low_complexity Low_complexity 1 88 0 1 707 401 139 69 11 chr17 16103165 16103252 -79169399 - Lx9 LINE L1 -11 7633 7542 1 707 1071 197 10 25 chr17 16103468 16103666 -79168985 - B3 SINE B2 -19 197 3 1 707 198 359 68 63 chr17 16103696 16103901 -79168750 - MIRb SINE MIR -36 232 27 1 707 285 284 45 11 chr17 16104164 16104253 -79168398 - MTEa LTR MaLR -6 373 282 1 707 263 161 18 0 chr17 16104352 16104408 -79168243 + GA-rich Low_complexity Low_complexity 1 57 0 1 707 432 51 0 0 chr17 16104410 16104469 -79168182 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 707 513 47 0 0 chr17 16104469 16104532 -79168119 + (GA)n Simple_repeat Simple_repeat 2 65 0 1 707 198 351 0 17 chr17 16105947 16106005 -79166646 - MER5A DNA MER1_type -132 57 1 1 707 611 76 0 42 chr17 16106356 16106367 -79166284 - B1_Mm SINE Alu 0 147 139 1 707 1139 112 0 6 chr17 16106367 16106547 -79166104 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1 707 611 76 0 42 chr17 16106547 16106631 -79166020 - B1_Mm SINE Alu -9 138 56 1 707 422 319 42 8 chr17 16107082 16107202 -79165449 + RSINE1 SINE B4 17 140 -25 1 707 453 122 0 0 chr17 16107208 16107282 -79165369 + (CA)n Simple_repeat Simple_repeat 1 74 0 1 707 914 279 0 109 chr17 16108498 16108820 -79163831 - B4 SINE B4 -1 291 5 1 707 27 49 0 0 chr17 16108942 16108983 -79163668 + AT_rich Low_complexity Low_complexity 1 41 0 1 707 1925 169 70 146 chr17 16110141 16110638 -79162013 + RLTR11A LTR ERVK 3 457 -71 1 707 279 0 0 0 chr17 16110638 16110669 -79161982 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 707 1925 169 70 146 chr17 16110669 16110740 -79161911 + RLTR11A LTR ERVK 458 527 -1 1 707 268 337 82 0 chr17 16111384 16111482 -79161169 - L2a LINE L2 -31 3395 3290 1 707 334 290 172 5 chr17 16111628 16111843 -79160808 + L1M2 LINE L1 4850 5100 -1043 1 707 2734 47 97 0 chr17 16111881 16112242 -79160409 - MTA_Mm LTR MaLR 0 396 1 1 707 437 339 83 75 chr17 16112335 16112940 -79159711 - L2a LINE L2 -246 3180 2503 1 707 277 242 234 0 chr17 16112952 16113076 -79159575 + MIRb SINE MIR 81 233 -35 1 707 254 280 0 0 chr17 16113384 16113434 -79159217 - ID4_ SINE ID -31 52 3 1 707 463 200 30 10 chr17 16114117 16114218 -79158433 - PB1D9 SINE Alu 0 120 18 1 707 418 0 17 34 chr17 16115353 16115412 -79157239 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 1 707 7835 55 0 2 chr17 16115419 16117011 -79155640 - L1Md_F2 LINE L1 -5 6577 4991 1 707 653 213 42 7 chr17 16117471 16117613 -79155038 + B1_Mur1 SINE Alu 3 149 0 1 707 204 200 0 0 chr17 16118521 16118571 -79154080 + GA-rich Low_complexity Low_complexity 1 50 0 1 707 21 36 0 0 chr17 16118992 16119020 -79153631 + AT_rich Low_complexity Low_complexity 1 28 0 1 707 663 290 34 0 chr17 16119067 16119243 -79153408 - B3A SINE B2 -16 182 1 1 707 838 226 108 44 chr17 16119271 16119541 -79153110 - Lx9 LINE L1 -44 7600 7312 1 707 297 0 0 0 chr17 16119541 16119574 -79153077 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 707 838 226 108 44 chr17 16119574 16119599 -79153052 - Lx9 LINE L1 -333 7311 7287 1 707 596 261 8 0 chr17 16119607 16119737 -79152914 - B1_Mur1 SINE Alu -17 132 2 1 707 297 89 0 0 chr17 16120023 16120068 -79152583 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 707 319 356 82 66 chr17 16120861 16121117 -79151534 - MER102b DNA MER1_type -52 289 30 1 707 186 71 0 0 chr17 16121369 16121397 -79151254 + (CTTG)n Simple_repeat Simple_repeat 4 31 0 1 707 567 0 0 0 chr17 16121397 16121460 -79151191 + (TTTA)n Simple_repeat Simple_repeat 1 63 0 1 707 2381 101 3 20 chr17 16121479 16121832 -79150819 + RLTR8 LTR ERVK 2 348 -17 1 708 588 267 53 7 chr17 16122463 16122614 -79150037 - RSINE1 SINE B4 0 165 8 1 708 230 315 103 58 chr17 16122877 16123032 -79149619 + MER5A DNA MER1_type 2 163 -26 1 708 405 58 0 0 chr17 16123194 16123246 -79149405 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 708 225 325 78 0 chr17 16123544 16123621 -79149030 + ORR1D2 LTR MaLR 63 145 -225 1 708 372 326 20 0 chr17 16123651 16123749 -79148902 + RSINE1 SINE B4 38 137 -28 1 708 3368 38 2 0 chr17 16124233 16124628 -79148023 + MTA_Mm LTR MaLR 1 396 0 1 708 432 250 18 9 chr17 16125164 16125273 -79147378 - MER58A DNA MER1_type -105 119 10 1 708 336 324 36 0 chr17 16125435 16125546 -79147105 + MER117 DNA MER1_type 73 187 -10 1 708 734 141 0 8 chr17 16126857 16126979 -79145672 - RMER17C LTR ERVK 0 410 290 1 708 661 183 22 49 chr17 16126969 16127143 -79145508 - RMER17C LTR ERVK -586 320 1 1 708 1283 155 120 97 chr17 16128113 16128506 -79144145 - RMER17C LTR ERVK -8 402 1 1 708 537 16 0 0 chr17 16128970 16129032 -79143619 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 708 1267 242 33 55 chr17 16129786 16129859 -79142792 + MTE2a LTR MaLR 18 78 -301 1 708 405 39 0 0 chr17 16129859 16129910 -79142741 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 708 1267 242 33 55 chr17 16129910 16130199 -79142452 + MTE2a LTR MaLR 79 372 -7 1 708 870 113 0 19 chr17 16131545 16131699 -79140952 + (TCCC)n Simple_repeat Simple_repeat 2 152 0 1 708 285 104 0 0 chr17 16131699 16131741 -79140910 + (TTTC)n Simple_repeat Simple_repeat 2 43 0 1 708 687 253 42 16 chr17 16131754 16131947 -79140704 - B3 SINE B2 -15 201 4 1 708 199 275 96 103 chr17 16132300 16132446 -79140205 + L2a LINE L2 3278 3422 -4 1 708 390 125 0 0 chr17 16132731 16132811 -79139840 + (T)n Simple_repeat Simple_repeat 1 80 0 2 708 218 333 87 30 chr17 16132950 16133073 -79139578 + MIR SINE MIR 94 216 -52 2 708 612 266 10 92 chr17 16133333 16133540 -79139111 + RMER30 DNA MER1_type 2 191 -11 2 708 310 295 63 28 chr17 16134342 16134485 -79138166 - MER5B DNA MER1_type 0 178 31 2 708 22 0 0 0 chr17 16134814 16134836 -79137815 + AT_rich Low_complexity Low_complexity 1 22 0 2 708 304 309 82 0 chr17 16134867 16134977 -79137674 - PB1 SINE Alu -8 119 1 2 708 4162 148 124 69 chr17 16135343 16136198 -79136453 + RMER19B LTR ERVK 1 902 0 2 708 271 369 29 53 chr17 16136205 16136411 -79136240 + MIR SINE MIR 36 236 -26 2 708 441 54 0 0 chr17 16136444 16136500 -79136151 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 708 434 347 48 8 chr17 16136514 16136750 -79135901 - B4A SINE B4 -2 290 2 2 708 610 358 17 38 chr17 16136750 16136986 -79135665 - B4A SINE B4 -61 231 1 2 708 417 290 52 88 chr17 16138234 16138452 -79134199 - MIR SINE MIR -11 251 30 2 708 217 358 74 0 chr17 16138923 16139018 -79133633 + MIR SINE MIR 28 129 -133 2 708 558 204 153 19 chr17 16139510 16139621 -79133030 + L1MA9 LINE L1 6020 6145 -167 2 708 306 0 0 0 chr17 16139621 16139655 -79132996 + (TC)n Simple_repeat Simple_repeat 1 34 0 2 708 558 204 153 19 chr17 16139655 16139758 -79132893 + L1MA9 LINE L1 6146 6263 -49 2 708 466 377 77 34 chr17 16142128 16142507 -79130144 + MLT1I LTR MaLR 16 410 -1 2 708 468 99 0 0 chr17 16145340 16145411 -79127240 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 708 297 0 0 0 chr17 16145411 16145443 -79127208 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 708 281 342 17 56 chr17 16145774 16145901 -79126750 - LTR16B2 LTR ERVL -292 188 79 2 708 851 291 93 56 chr17 16146710 16147224 -79125427 + MT2A LTR ERVL 1 533 0 2 708 329 314 64 36 chr17 16148341 16148592 -79124059 - MERVL_2A-int LTR ERVL -2783 2978 2721 2 708 251 359 0 8 chr17 16149086 16149204 -79123447 - MERVL_2A-int LTR ERVL -3681 2080 1964 2 708 381 183 409 0 chr17 16149594 16149687 -79122964 + URR1A DNA MER1_type 1 131 -95 2 708 8006 51 1 1 chr17 16149700 16151448 -79121203 - L1Md_F3 LINE L1 -17 6567 4818 2 708 511 137 85 38 chr17 16151449 16151555 -79121096 + URR1A DNA MER1_type 115 225 -1 2 708 204 125 0 0 chr17 16152146 16152178 -79120473 + (A)n Simple_repeat Simple_repeat 1 32 0 2 708 210 231 17 8 chr17 16153968 16154086 -79118565 + GA-rich Low_complexity Low_complexity 62 180 0 2 708 590 168 0 11 chr17 16154115 16154296 -79118355 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 2 708 416 124 87 0 chr17 16154307 16154468 -79118183 + (CAGA)n Simple_repeat Simple_repeat 2 176 0 2 708 402 22 0 0 chr17 16154485 16154531 -79118120 + HAL1-3A_ME LINE L1 1976 2021 -837 2 708 307 207 48 24 chr17 16154566 16154650 -79118001 + HAL1-3A_ME LINE L1 1963 2048 -810 2 708 201 167 0 0 chr17 16154654 16154690 -79117961 + (CAGA)n Simple_repeat Simple_repeat 3 38 0 2 708 777 199 0 0 chr17 16154691 16155362 -79117289 + GA-rich Low_complexity Low_complexity 1 671 0 2 708 261 161 17 35 chr17 16155371 16155429 -79117222 + (CAGAGA)n Simple_repeat Simple_repeat 4 60 0 2 708 270 0 0 0 chr17 16155581 16155611 -79117040 + (TCTA)n Simple_repeat Simple_repeat 2 31 0 2 708 22 35 0 0 chr17 16155687 16155716 -79116935 + AT_rich Low_complexity Low_complexity 1 29 0 2 708 816 212 17 38 chr17 16155716 16155956 -79116695 - Lx2B LINE L1 0 7000 6766 2 708 620 257 14 0 chr17 16158052 16158192 -79114459 - B1_Mur3 SINE Alu -7 142 1 2 708 396 0 0 0 chr17 16158542 16158586 -79114065 + (TCTA)n Simple_repeat Simple_repeat 3 46 0 2 708 1860 153 190 5 chr17 16158670 16159076 -79113575 - Lx4B LINE L1 -10 7048 6568 2 708 7147 58 0 0 chr17 16159515 16160450 -79112201 + L1Md_F3 LINE L1 4652 5586 -297 2 708 7985 44 6 4 chr17 16160450 16161446 -79111205 + L1Md_F3 LINE L1 5587 6584 0 2 708 246 237 20 10 chr17 16161842 16161940 -79110711 + CT-rich Low_complexity Low_complexity 2 100 0 2 708 362 276 72 7 chr17 16163130 16163283 -79109368 - HAL1 LINE L1 -2323 184 22 2 708 618 315 128 4 chr17 16163283 16163525 -79109126 + MLT1G1 LTR MaLR 1 272 -307 2 708 219 193 24 12 chr17 16164094 16164178 -79108473 + (TG)n Simple_repeat Simple_repeat 1 85 0 2 708 222 183 14 27 chr17 16164248 16164321 -79108330 + (TG)n Simple_repeat Simple_repeat 1 72 0 2 708 485 318 31 37 chr17 16164336 16164499 -79108152 - RSINE1 SINE B4 0 165 4 2 708 21 0 0 0 chr17 16164850 16164871 -79107780 + AT_rich Low_complexity Low_complexity 1 21 0 2 708 394 265 10 30 chr17 16165318 16165419 -79107232 - MER5A DNA MER1_type -38 151 53 2 708 11002 63 20 20 chr17 16165829 16168011 -79104640 - L1Md_F2 LINE L1 -19 6563 4398 2 708 292 357 38 25 chr17 16168050 16168208 -79104443 - MamGypLTR1a LTR Gypsy -11 773 614 2 708 859 283 13 0 chr17 16168603 16168840 -79103811 + L1_Mur3 LINE L1 5500 5739 -141 2 708 236 114 0 0 chr17 16169849 16169884 -79102767 - MLT1A1 LTR MaLR -2 406 372 2 708 657 56 0 0 chr17 16169917 16170007 -79102644 + (CA)n Simple_repeat Simple_repeat 1 90 0 2 708 497 16 16 0 chr17 16170007 16170068 -79102583 + (GA)n Simple_repeat Simple_repeat 2 64 0 2 708 722 124 8 0 chr17 16170741 16170862 -79101789 + (TATATG)n Simple_repeat Simple_repeat 2 123 0 2 708 25 0 0 0 chr17 16170862 16170887 -79101764 + AT_rich Low_complexity Low_complexity 1 25 0 2 708 222 411 118 7 chr17 16171151 16171303 -79101348 + MIR SINE MIR 12 180 -82 2 708 2603 194 95 6 chr17 16171744 16172272 -79100379 - RMER15 LTR ERVL 0 575 1 2 708 744 257 10 50 chr17 16172298 16172499 -79100152 - B3A SINE B2 0 198 6 2 708 26436 97 2 11 chr17 16172521 16177209 -79095442 - L1_Mus1 LINE L1 0 6567 1929 2 708 630 71 0 0 chr17 16177211 16177295 -79095356 + (GA)n Simple_repeat Simple_repeat 1 84 0 2 708 210 91 0 0 chr17 16178187 16178220 -79094431 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 708 657 310 70 10 chr17 16178235 16178434 -79094217 - B4 SINE B4 0 292 82 2 708 214 323 86 31 chr17 16179797 16179925 -79092726 + L2c LINE L2 3092 3226 -161 2 708 445 206 11 0 chr17 16179970 16180062 -79092589 - Lx9 LINE L1 -237 7407 7315 2 708 29414 64 0 2 chr17 16180061 16184573 -79088078 - L1Md_F2 LINE L1 0 6582 2076 2 708 1509 75 0 0 chr17 16184576 16184763 -79087888 - L1_Mm LINE L1 -237 5646 5460 2 708 17440 113 4 19 chr17 16184770 16187514 -79085137 + L1_Mm LINE L1 2421 5125 -758 2 708 2519 95 3 0 chr17 16187520 16187869 -79084782 + L1_Mus1 LINE L1 6218 6567 0 2 708 1006 158 114 38 chr17 16190166 16190376 -79082275 - URR1A DNA MER1_type 0 226 1 2 708 243 0 0 0 chr17 16191086 16191113 -79081538 + (A)n Simple_repeat Simple_repeat 1 27 0 2 708 299 299 84 87 chr17 16194008 16194123 -79078528 - L1MA8 LINE L1 -133 6158 6042 2 708 2069 193 13 3 chr17 16194123 16194513 -79078138 - ORR1B1 LTR MaLR 0 394 1 2 708 299 299 84 87 chr17 16194513 16194789 -79077862 - L1MA8 LINE L1 -250 6041 5768 2 708 1059 242 122 27 chr17 16194796 16195311 -79077340 - Lx7 LINE L1 0 7696 7081 2 708 1026 17 0 0 chr17 16195311 16195431 -79077220 + (TTC)n Simple_repeat Simple_repeat 1 120 0 2 708 755 69 0 0 chr17 16195431 16195533 -79077118 - B1_Mus1 SINE Alu -12 136 35 2 708 1277 219 135 0 chr17 16195536 16195759 -79076892 - Lx7 LINE L1 -373 7100 6825 2 708 189 0 0 0 chr17 16195759 16195780 -79076871 + (CTG)n Simple_repeat Simple_repeat 1 21 0 2 708 1277 273 199 14 chr17 16195780 16195982 -79076669 - Lx7 LINE L1 -613 6860 6581 2 708 35 24 0 0 chr17 16196398 16196440 -79076211 + AT_rich Low_complexity Low_complexity 1 42 0 2 708 512 176 12 92 chr17 16196444 16196607 -79076044 - Lx9 LINE L1 -16 7628 7479 2 708 330 306 0 8 chr17 16196624 16196659 -79075992 - L1M4 LINE L1 -348 5826 5792 2 708 210 37 0 0 chr17 16196659 16196686 -79075965 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 708 225 0 0 0 chr17 16196692 16196717 -79075934 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 708 330 306 0 8 chr17 16196717 16196796 -79075855 - L1M4 LINE L1 -389 5785 5708 2 708 1110 208 41 15 chr17 16197094 16197362 -79075289 - Lx7 LINE L1 -247 7449 7175 2 708 278 163 106 80 chr17 16197362 16197475 -79075176 - L1_Mur3 LINE L1 -3782 2098 1983 2 708 494 286 70 113 chr17 16197472 16197870 -79074781 - L1_Mur3 LINE L1 -6670 1058 678 2 708 3620 67 2 20 chr17 16197974 16198474 -79074177 - L1Md_F2 LINE L1 0 6582 6092 2 708 399 332 41 64 chr17 16198685 16199046 -79073605 - RLTR17 LTR ERVK -250 442 59 2 708 375 331 31 38 chr17 16200132 16200292 -79072359 - RSINE1 SINE B4 -4 161 3 2 708 21 0 0 0 chr17 16200409 16200430 -79072221 + AT_rich Low_complexity Low_complexity 1 21 0 2 708 249 214 83 0 chr17 16200755 16200839 -79071812 - Lx9 LINE L1 -7 7637 7547 2 708 314 387 90 25 chr17 16200944 16201312 -79071339 + HERV16-int LTR ERVL 1848 2239 -2757 2 708 401 299 0 49 chr17 16201496 16201619 -79071032 - B4A SINE B4 -163 129 13 2 708 216 299 0 82 chr17 16201554 16201627 -79071024 - BC1_Mm scRNA scRNA -81 71 5 2 708 681 353 14 0 chr17 16202267 16202474 -79070177 - MER58A DNA MER1_type 0 224 15 2 708 200 278 0 43 chr17 16202605 16202699 -79069952 + A-rich Low_complexity Low_complexity 4 93 0 2 708 346 195 23 0 chr17 16202710 16202797 -79069854 + GA-rich Low_complexity Low_complexity 5 93 0 2 708 1512 45 0 0 chr17 16202911 16203090 -79069561 + L1Md_F2 LINE L1 5408 5586 -297 2 708 8302 35 1 0 chr17 16203090 16204074 -79068577 + L1Md_F2 LINE L1 5587 6571 -11 2 708 807 228 0 34 chr17 16204074 16204099 -79068552 + L1MD LINE L1 5616 5634 -2361 2 708 1029 301 47 40 chr17 16204623 16204722 -79067929 + MTE2b LTR MaLR 56 151 -228 2 708 2549 171 125 40 chr17 16204722 16205355 -79067296 - RMER6C LTR ERVK 0 690 4 2 708 1029 301 47 40 chr17 16205355 16205577 -79067074 + MTE2b LTR MaLR 152 379 0 2 708 439 284 121 0 chr17 16206365 16206481 -79066170 + MER45A DNA Tip100 2 131 -47 2 708 873 346 39 24 chr17 16206856 16207238 -79065413 + MLT1F2 LTR MaLR 171 558 -2 2 708 225 309 103 11 chr17 16208569 16208658 -79063993 + ID2 SINE ID 1 97 -55 3 708 261 319 166 17 chr17 16209024 16209232 -79063419 - MIRc SINE MIR 0 262 14 3 708 958 233 186 0 chr17 16209563 16209907 -79062744 - Lx9 LINE L1 -5 7639 7232 3 708 973 235 14 5 chr17 16210095 16210309 -79062342 - B3 SINE B2 0 216 1 3 708 3660 191 77 11 chr17 16210632 16211241 -79061410 + Lx9 LINE L1 6824 7456 -188 3 708 336 48 0 0 chr17 16211241 16211283 -79061368 + (TATG)n Simple_repeat Simple_repeat 2 43 0 3 708 3660 191 77 11 chr17 16211283 16211436 -79061215 + Lx9 LINE L1 7457 7636 -8 3 708 2338 51 0 7 chr17 16211769 16212063 -79060588 + L1_Mus1 LINE L1 6276 6567 0 3 708 2220 178 28 16 chr17 16212210 16212633 -79060018 - RMER15 LTR ERVL -2 573 146 3 708 7420 88 19 6 chr17 16212633 16214226 -79058425 - L1_Mus3 LINE L1 -33 6605 4996 3 708 367 179 38 25 chr17 16214228 16214308 -79058343 - RMER15 LTR ERVL -418 157 77 3 708 748 212 20 7 chr17 16214470 16214617 -79058034 - B1_Mur2 SINE Alu 0 149 1 3 708 221 75 25 0 chr17 16214655 16214695 -79057956 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 3 708 21 0 0 0 chr17 16215307 16215328 -79057323 + AT_rich Low_complexity Low_complexity 1 21 0 3 708 23 33 0 0 chr17 16215393 16215423 -79057228 + AT_rich Low_complexity Low_complexity 1 30 0 3 708 232 238 31 16 chr17 16216133 16216197 -79056454 + MER112 DNA MER1_type 116 180 -81 3 708 261 0 0 0 chr17 16216227 16216256 -79056395 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 3 708 485 68 0 13 chr17 16216569 16216644 -79056007 + (CAAAA)n Simple_repeat Simple_repeat 2 75 0 3 708 222 271 196 10 chr17 16217456 16217553 -79055098 + MIR SINE MIR 145 259 -3 3 708 237 83 0 0 chr17 16219641 16219677 -79052974 + (T)n Simple_repeat Simple_repeat 1 36 0 3 708 243 203 0 0 chr17 16220242 16220306 -79052345 + (TA)n Simple_repeat Simple_repeat 1 64 0 3 708 7060 92 6 3 chr17 16221753 16222760 -79049891 - MusHAL1 LINE L1 -819 1893 884 3 708 365 322 48 75 chr17 16223200 16223452 -79049199 + L1MA8 LINE L1 5781 6025 -275 3 708 547 228 112 63 chr17 16223626 16223832 -79048819 - B3 SINE B2 0 216 1 3 708 28 71 0 0 chr17 16224332 16224388 -79048263 + AT_rich Low_complexity Low_complexity 1 56 0 3 708 28 48 0 0 chr17 16224653 16224695 -79047956 + AT_rich Low_complexity Low_complexity 1 42 0 3 708 583 262 52 20 chr17 16224695 16224830 -79047821 + RSINE1 SINE B4 2 143 -22 3 708 306 0 0 0 chr17 16224830 16224864 -79047787 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 708 583 260 54 20 chr17 16224864 16224886 -79047765 + RSINE1 SINE B4 144 165 0 3 708 679 236 101 0 chr17 16225476 16225624 -79047027 - B3 SINE B2 -5 211 49 3 708 334 326 95 20 chr17 16225787 16225934 -79046717 - HAL1-3A_ME LINE L1 -417 2441 2284 3 708 559 228 64 12 chr17 16225941 16226114 -79046537 - L1MA6 LINE L1 0 6300 6119 3 708 226 283 72 52 chr17 16227503 16227600 -79045051 + ID_B1 SINE B4 78 176 -48 3 708 341 255 64 28 chr17 16227513 16227622 -79045029 + PB1D10 SINE Alu 5 117 0 3 708 682 217 119 5 chr17 16228124 16228309 -79044342 - B3 SINE B2 -6 210 5 3 708 239 304 28 38 chr17 16228336 16228442 -79044209 + L1M5 LINE L1 5630 5734 -460 3 708 1075 58 6 13 chr17 16228519 16228676 -79043975 + L1Md_F2 LINE L1 6426 6581 -1 3 708 192 125 0 0 chr17 16228677 16228709 -79043942 + (TAAG)n Simple_repeat Simple_repeat 4 35 0 3 708 422 167 12 0 chr17 16228925 16229009 -79043642 + CT-rich Low_complexity Low_complexity 2 86 0 3 708 2293 122 39 0 chr17 16229009 16229370 -79043281 - Lx3B LINE L1 -5 6968 6594 3 708 266 300 0 0 chr17 16229370 16229450 -79043201 + L1ME5 LINE L1 6109 6188 -6 3 708 232 349 70 23 chr17 16229979 16230108 -79042543 + MER45A DNA Tip100 31 165 -13 3 708 354 336 35 42 chr17 16230311 16230454 -79042197 - Lx8 LINE L1 -148 7325 7184 3 708 203 98 45 76 chr17 16230525 16230591 -79042060 + (CCCCG)n Simple_repeat Simple_repeat 1 64 0 3 708 633 27 0 0 chr17 16230634 16230709 -79041942 + (TTCC)n Simple_repeat Simple_repeat 4 78 0 3 708 318 219 0 88 chr17 16230721 16230801 -79041850 - B3 SINE B2 0 216 144 3 708 324 329 111 6 chr17 16230801 16230963 -79041688 - Lx8 LINE L1 -1200 6273 6095 3 708 363 296 9 36 chr17 16231207 16231319 -79041332 - PB1D10 SINE Alu -8 109 1 3 708 198 0 0 0 chr17 16231336 16231358 -79041293 + (TA)n Simple_repeat Simple_repeat 2 23 0 3 708 304 366 97 21 chr17 16232123 16232360 -79040291 - L1MEc LINE L1 -6028 372 118 3 708 192 77 0 0 chr17 16233971 16233997 -79038654 + (TC)n Simple_repeat Simple_repeat 1 26 0 3 708 333 0 0 0 chr17 16234955 16234992 -79037659 + (TTA)n Simple_repeat Simple_repeat 1 37 0 3 708 2044 335 56 23 chr17 16235075 16235563 -79037088 + Lx8 LINE L1 6254 6749 -724 3 708 180 0 0 0 chr17 16235563 16235583 -79037068 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 708 2044 335 56 23 chr17 16235583 16236053 -79036598 + Lx8 LINE L1 6750 7244 -229 3 708 28 0 0 0 chr17 16236938 16236966 -79035685 + AT_rich Low_complexity Low_complexity 1 28 0 3 708 378 0 0 0 chr17 16236979 16237021 -79035630 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 708 451 355 21 0 chr17 16237022 16237163 -79035488 - RSINE1 SINE B4 -16 149 6 3 708 250 315 127 11 chr17 16238633 16238895 -79033756 - L1MEf LINE L1 -5331 869 579 3 708 4953 236 71 24 chr17 16239774 16241029 -79031622 + Lx9 LINE L1 6309 7622 -22 3 708 251 267 46 37 chr17 16241339 16241448 -79031203 - L1MC4 LINE L1 -612 7430 7321 3 708 1804 66 0 0 chr17 16242117 16242343 -79030308 - L1_Mus1 LINE L1 0 6567 6342 3 708 576 312 25 54 chr17 16242412 16242615 -79030036 - ID_B1 SINE B4 -25 199 3 3 708 2452 180 7 189 chr17 16242997 16243744 -79028907 - RMER19C LTR ERVK 0 611 1 3 708 253 218 0 18 chr17 16244375 16244431 -79028220 + CT-rich Low_complexity Low_complexity 2 56 0 3 708 312 297 1 16 chr17 16244434 16244575 -79028076 + L1MA4 LINE L1 5794 5933 -358 3 708 215 31 0 30 chr17 16244860 16244893 -79027758 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 3 708 6230 45 0 0 chr17 16245071 16245823 -79026828 - L1Md_T LINE L1 -1 6581 5830 3 708 1062 309 61 24 chr17 16246052 16246711 -79025940 - L1_Rod LINE L1 -3029 2851 2169 3 708 269 305 6 23 chr17 16246780 16246955 -79025696 - L1_Rod LINE L1 -3901 1979 1817 3 708 3422 23 2 5 chr17 16246960 16247357 -79025294 - MTA_Mm LTR MaLR 0 396 1 3 708 8675 53 6 1 chr17 16247357 16248450 -79024201 - MTA_Mm-int LTR MaLR 0 1098 1 3 708 3120 34 5 5 chr17 16248451 16248841 -79023810 - MTA_Mm LTR MaLR -1 395 6 3 708 968 291 37 85 chr17 16248843 16249211 -79023440 - L1_Rod LINE L1 -3896 1951 1581 3 708 2225 146 60 36 chr17 16249211 16249596 -79023055 + ORR1B1 LTR MaLR 1 394 0 3 708 968 295 33 76 chr17 16249596 16250238 -79022413 - L1_Rod LINE L1 -4267 1580 914 3 708 249 133 51 51 chr17 16250964 16251043 -79021608 + T-rich Low_complexity Low_complexity 2 80 0 3 708 204 357 0 0 chr17 16251072 16251142 -79021509 + GA-rich Low_complexity Low_complexity 4 73 0 3 708 210 128 0 0 chr17 16252735 16252774 -79019877 + (TAAAAA)n Simple_repeat Simple_repeat 3 41 0 3 709 1109 158 10 20 chr17 16253902 16254102 -79018549 + Lx9 LINE L1 6859 7056 -588 3 709 715 167 33 115 chr17 16254102 16254346 -79018305 - RLTR26 LTR ERVK 0 642 419 3 709 255 289 0 10 chr17 16254348 16254446 -79018205 + (CAG)n Simple_repeat Simple_repeat 3 99 0 3 709 1086 259 81 81 chr17 16254447 16254892 -79017759 + Lx9 LINE L1 7196 7640 -4 3 709 266 249 105 77 chr17 16255174 16255422 -79017229 + Charlie1a DNA MER1_type 1114 1368 -87 3 709 30509 33 0 0 chr17 16255897 16260232 -79012419 - L1Md_T LINE L1 -1 6581 2248 3 709 40675 9 0 0 chr17 16260247 16265975 -79006676 - L1Md_A LINE L1 0 6582 854 3 709 908 9 0 0 chr17 16265967 16266078 -79006573 - L1Md_A LINE L1 -6192 532 422 3 709 7874 109 35 9 chr17 16266071 16268208 -79004443 - L1Md_T LINE L1 -3613 2270 119 3 709 7235 122 17 1 chr17 16268355 16269747 -79002904 - Lx LINE L1 -7 6647 5234 3 709 4893 97 6 17 chr17 16269738 16270935 -79001716 - L1VL2 LINE L1 -2152 1463 284 3 709 2397 200 12 32 chr17 16271876 16272438 -79000213 + RLTR31_Mur LTR ERVK 1 551 -2 3 709 28732 37 0 2 chr17 16273977 16279430 -78993221 + L1Md_T LINE L1 59 5589 -297 3 709 8534 28 0 0 chr17 16279430 16280426 -78992225 + L1Md_T LINE L1 5590 6585 0 3 709 33 56 0 0 chr17 16280494 16280548 -78992103 + AT_rich Low_complexity Low_complexity 1 54 0 3 709 554 302 68 80 chr17 16281035 16281298 -78991353 + B4A SINE B4 10 269 -23 3 709 1119 53 0 0 chr17 16281298 16281449 -78991202 + (CA)n Simple_repeat Simple_repeat 2 152 0 3 709 1206 244 89 49 chr17 16281463 16281812 -78990839 + ORR1D2 LTR MaLR 6 368 -2 3 709 288 305 90 22 chr17 16282446 16282580 -78990071 - MIR3 SINE MIR -6 202 60 3 709 978 280 85 26 chr17 16283130 16283482 -78989169 + Lx8 LINE L1 6779 7151 -322 3 709 488 242 53 0 chr17 16283947 16284079 -78988572 - B3A SINE B2 -3 195 57 3 709 1200 40 0 20 chr17 16284131 16284282 -78988369 - B1_Mus1 SINE Alu 0 148 1 3 709 1567 240 86 8 chr17 16284503 16284877 -78987774 - MTD LTR MaLR -2 417 15 3 709 386 290 103 7 chr17 16285487 16285633 -78987018 - MTEb LTR MaLR -15 364 205 3 709 535 241 129 52 chr17 16285986 16286134 -78986517 - B3 SINE B2 -8 208 50 3 709 432 0 0 0 chr17 16286134 16286182 -78986469 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 709 535 241 129 52 chr17 16286182 16286226 -78986425 - B3 SINE B2 -167 49 1 3 709 26 50 0 0 chr17 16286479 16286519 -78986132 + AT_rich Low_complexity Low_complexity 1 40 0 3 709 414 0 0 0 chr17 16286542 16286588 -78986063 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 709 224 259 24 24 chr17 16286607 16286690 -78985961 + GA-rich Low_complexity Low_complexity 1 83 0 3 709 25 0 0 0 chr17 16286696 16286721 -78985930 + AT_rich Low_complexity Low_complexity 1 25 0 3 709 820 307 14 36 chr17 16286821 16287041 -78985610 + B4 SINE B4 2 216 -76 3 709 777 118 0 0 chr17 16287051 16287170 -78985481 + (CAA)n Simple_repeat Simple_repeat 3 121 0 3 709 304 282 0 40 chr17 16287176 16287250 -78985401 + B4 SINE B4 222 292 0 3 709 856 214 125 0 chr17 16287748 16287940 -78984711 - B3 SINE B2 0 216 1 3 709 261 257 108 0 chr17 16288294 16288368 -78984283 - ID4_ SINE ID 0 83 2 3 709 306 111 0 0 chr17 16289510 16289555 -78983096 - ORR1B1 LTR MaLR 0 367 323 3 709 4939 107 24 19 chr17 16289610 16291524 -78981127 - Lx3_Mus LINE L1 -8 6973 5051 4 709 1872 153 84 0 chr17 16291526 16291847 -78980804 - ORR1B1 LTR MaLR -41 353 6 3 709 232 363 89 14 chr17 16292113 16292326 -78980325 - MIRb SINE MIR -30 232 6 4 709 1644 326 50 40 chr17 16292369 16293043 -78979608 - Lx8 LINE L1 -16 7457 6777 4 709 227 393 34 34 chr17 16295502 16295681 -78976970 + MIRb SINE MIR 22 200 -68 4 709 8577 92 194 5 chr17 16295868 16298065 -78974586 - L1Md_F LINE L1 -2894 2989 374 4 709 2109 53 8 0 chr17 16298068 16298333 -78974318 - L1_Mus1 LINE L1 -9 6558 6292 4 709 555 304 20 56 chr17 16298367 16298562 -78974089 - B3A SINE B2 -9 189 2 4 709 261 0 0 0 chr17 16298846 16298875 -78973776 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 709 233 350 30 10 chr17 16299743 16299844 -78972807 + LTR16A LTR ERVL 293 395 -56 4 709 7159 120 34 5 chr17 16300956 16302217 -78970434 - Lx2 LINE L1 0 7008 5592 4 709 844 287 31 59 chr17 16302474 16302718 -78969933 - MTE2a LTR MaLR -4 375 136 4 709 1832 209 119 10 chr17 16302718 16303230 -78969421 + RLTR12A LTR ERVK 1 568 0 4 709 844 287 31 59 chr17 16303230 16303274 -78969377 - MTE2a LTR MaLR -244 135 95 4 709 307 293 0 0 chr17 16303292 16303367 -78969284 - MTE2a LTR MaLR -288 91 17 4 709 323 329 150 42 chr17 16304849 16305109 -78967542 + L2 LINE L2 2553 2840 -579 4 709 291 28 0 0 chr17 16305154 16305190 -78967461 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 709 359 260 0 13 chr17 16305545 16305623 -78967028 + B3A SINE B2 1 77 -121 4 709 2072 94 32 3 chr17 16305627 16305935 -78966716 - L1_Mm LINE L1 -835 5048 4732 4 709 273 89 0 0 chr17 16305935 16305980 -78966671 + (T)n Simple_repeat Simple_repeat 1 45 0 4 709 349 115 0 0 chr17 16305982 16306034 -78966617 - L1_Mur2 LINE L1 -1147 4730 4679 4 709 7532 79 3 30 chr17 16306037 16307625 -78965026 + L1_Mus2 LINE L1 5037 6562 -4 4 709 242 324 75 9 chr17 16308219 16308325 -78964326 + MER20 DNA MER1_type 107 219 0 4 709 320 314 91 34 chr17 16308697 16308872 -78963779 - MLT1A0 LTR MaLR -179 186 2 4 709 6773 117 20 13 chr17 16308876 16310079 -78962572 - Lx LINE L1 -5 6649 5437 4 709 258 105 0 0 chr17 16310800 16310838 -78961813 + (T)n Simple_repeat Simple_repeat 1 38 0 4 709 264 77 0 0 chr17 16311234 16311273 -78961378 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 709 221 309 39 78 chr17 16311429 16311531 -78961120 + B1F1 SINE Alu 1 98 -51 4 709 627 39 0 0 chr17 16311597 16311675 -78960976 + (CA)n Simple_repeat Simple_repeat 2 79 0 4 709 500 284 67 45 chr17 16311811 16312126 -78960525 - L1MC2 LINE L1 -221 6123 5791 4 709 1841 274 52 7 chr17 16312293 16312731 -78959920 + Lx5 LINE L1 6588 7045 -5 4 709 21 0 0 0 chr17 16313094 16313115 -78959536 + AT_rich Low_complexity Low_complexity 1 21 0 4 709 576 212 0 32 chr17 16313320 16313505 -78959146 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 709 24 0 0 0 chr17 16315000 16315024 -78957627 + AT_rich Low_complexity Low_complexity 1 24 0 4 709 186 240 0 0 chr17 16315428 16315478 -78957173 + CT-rich Low_complexity Low_complexity 1 50 0 4 709 614 204 0 6 chr17 16315611 16315986 -78956665 + (TG)n Simple_repeat Simple_repeat 1 372 0 4 709 307 287 134 36 chr17 16316084 16316196 -78956455 - B4A SINE B4 -88 204 82 4 709 37 52 0 0 chr17 16317016 16317074 -78955577 + AT_rich Low_complexity Low_complexity 1 58 0 4 709 180 0 0 0 chr17 16317623 16317643 -78955008 + (A)n Simple_repeat Simple_repeat 1 20 0 4 709 1194 98 25 71 chr17 16318356 16318524 -78954127 + B2_Mm2 SINE B2 1 166 -29 4 709 196 30 29 29 chr17 16318524 16318558 -78954093 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 4 709 1194 98 25 71 chr17 16318558 16318586 -78954065 + B2_Mm2 SINE B2 167 188 -7 4 709 288 321 71 27 chr17 16318687 16318799 -78953852 - PB1 SINE Alu -4 123 7 4 709 248 70 0 23 chr17 16320711 16320755 -78951896 + (CAAAAA)n Simple_repeat Simple_repeat 1 43 0 4 709 249 57 0 0 chr17 16321243 16321278 -78951373 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 4 709 984 83 8 0 chr17 16321278 16321411 -78951240 - B1_Mus2 SINE Alu -13 134 1 4 709 2383 303 46 44 chr17 16322742 16323653 -78948998 + Lx7 LINE L1 6303 7215 -481 4 709 213 39 0 0 chr17 16323661 16323687 -78948964 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 709 282 306 32 16 chr17 16323733 16323856 -78948795 + Lx7 LINE L1 7559 7683 -13 4 709 7582 90 18 4 chr17 16325109 16326314 -78946337 - Lx LINE L1 -6 6648 5424 4 709 2449 151 7 0 chr17 16326314 16326725 -78945926 + L1_Mur2 LINE L1 5024 5437 -440 4 709 1937 231 5 12 chr17 16326839 16327251 -78945400 - MTD LTR MaLR -8 411 3 4 709 330 157 36 0 chr17 16327819 16327902 -78944749 + CT-rich Low_complexity Low_complexity 2 87 0 4 709 294 268 127 51 chr17 16327967 16328085 -78944566 - MLT2C2 LTR ERVL -101 363 237 4 709 610 298 21 21 chr17 16328097 16328289 -78944362 - RMER15 LTR ERVL -17 558 367 4 709 398 270 55 68 chr17 16328369 16328532 -78944119 - RMER15 LTR ERVL -414 161 1 4 709 719 238 101 18 chr17 16328532 16328749 -78943902 - MLT2C2 LTR ERVL -226 238 3 4 709 1836 233 38 32 chr17 16329550 16330344 -78942307 + L1_Mur3 LINE L1 855 1666 -4214 4 709 22 35 0 0 chr17 16331011 16331040 -78941611 + AT_rich Low_complexity Low_complexity 1 29 0 4 709 234 0 0 0 chr17 16331973 16331999 -78940652 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 709 871 225 89 0 chr17 16332828 16333019 -78939632 - B3 SINE B2 -8 208 1 4 709 23 33 0 0 chr17 16333218 16333248 -78939403 + AT_rich Low_complexity Low_complexity 1 30 0 4 709 27 49 0 0 chr17 16333356 16333397 -78939254 + AT_rich Low_complexity Low_complexity 1 41 0 4 709 604 271 17 30 chr17 16333862 16334094 -78938557 + L1MA6 LINE L1 5355 5583 -708 4 709 1365 82 16 6 chr17 16334289 16334472 -78938179 + B2_Mm2 SINE B2 5 189 -6 4 709 282 268 37 50 chr17 16334502 16334663 -78937988 + L1MA6 LINE L1 5833 5991 -309 4 709 327 368 9 0 chr17 16334710 16334824 -78937827 - PB1D10 SINE Alu 0 117 3 4 709 355 248 98 0 chr17 16334924 16335057 -78937594 + L1MA6 LINE L1 6154 6299 -1 4 709 1742 14 5 9 chr17 16335067 16335280 -78937371 + L1Md_F2 LINE L1 6369 6580 -2 4 709 23 33 0 0 chr17 16337259 16337289 -78935362 + AT_rich Low_complexity Low_complexity 1 30 0 4 709 255 61 0 0 chr17 16337604 16337637 -78935014 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 4 709 247 277 148 25 chr17 16337697 16337819 -78934832 - MIR SINE MIR -116 146 10 4 709 6414 41 1 0 chr17 16338020 16339089 -78933562 + L1Md_F2 LINE L1 5103 6172 -410 4 709 1805 36 0 0 chr17 16339089 16339311 -78933340 + L1Md_F2 LINE L1 6361 6582 0 4 709 227 217 29 115 chr17 16339372 16339476 -78933175 - LTR86B2 LTR ERVL -4 483 389 4 709 366 176 0 0 chr17 16339843 16339928 -78932723 + (TG)n Simple_repeat Simple_repeat 1 85 0 4 709 222 308 60 30 chr17 16339930 16340064 -78932587 + L2c LINE L2 3248 3385 -2 4 709 359 338 85 13 chr17 16340116 16340269 -78932382 + L2 LINE L2 2600 2763 -656 4 709 244 282 13 0 chr17 16342091 16342169 -78930482 + (CATATA)n Simple_repeat Simple_repeat 4 82 0 4 709 375 127 0 0 chr17 16342369 16342424 -78930227 + B3A SINE B2 1 55 -143 4 709 31 26 0 0 chr17 16342597 16342635 -78930016 + AT_rich Low_complexity Low_complexity 1 38 0 4 709 816 234 33 10 chr17 16343146 16343340 -78929311 + B3 SINE B2 17 209 -7 4 709 278 340 19 0 chr17 16343910 16344016 -78928635 - PB1D10 SINE Alu -9 108 1 4 709 1002 281 68 35 chr17 16344108 16344650 -78928001 - L1MC4 LINE L1 -616 7426 6867 4 709 3134 173 36 47 chr17 16344743 16345357 -78927294 - Lx5 LINE L1 0 7050 6444 4 709 2664 184 33 20 chr17 16345356 16345906 -78926745 + Lx5 LINE L1 5905 6461 -589 4 709 795 176 0 0 chr17 16346106 16346265 -78926386 + (TA)n Simple_repeat Simple_repeat 1 159 0 4 709 450 0 0 0 chr17 16346704 16346754 -78925897 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 709 482 73 2 0 chr17 16347262 16347332 -78925319 + RLTR10E LTR ERVK 250 386 -4 4 709 2337 209 111 9 chr17 16347335 16347919 -78924732 - MERVL_2A-int LTR ERVL -5116 645 2 4 709 28 0 0 0 chr17 16348714 16348742 -78923909 + AT_rich Low_complexity Low_complexity 1 28 0 4 709 21250 120 128 9 chr17 16348742 16353987 -78918664 - L1_Mus3 LINE L1 -7 6631 718 4 709 329 188 16 0 chr17 16354046 16354110 -78918541 - L1Md_F LINE L1 -5782 737 673 4 709 249 196 0 0 chr17 16354554 16354605 -78918046 + CT-rich Low_complexity Low_complexity 5 55 0 4 709 242 210 65 0 chr17 16355177 16355239 -78917412 + GA-rich Low_complexity Low_complexity 2 67 0 4 709 1167 117 0 0 chr17 16355241 16355421 -78917230 + (GA)n Simple_repeat Simple_repeat 1 180 0 4 709 269 366 23 47 chr17 16356002 16356131 -78916520 - MER5A DNA MER1_type -1 188 63 4 709 501 252 30 8 chr17 16356353 16356485 -78916166 - ORR1E LTR MaLR -221 138 4 4 709 3369 179 35 32 chr17 16356751 16357439 -78915212 + RLTR17 LTR ERVK 3 692 0 4 709 195 85 64 0 chr17 16357489 16357536 -78915115 + (TAGA)n Simple_repeat Simple_repeat 2 51 0 4 709 23 33 0 0 chr17 16358604 16358634 -78914017 + AT_rich Low_complexity Low_complexity 1 30 0 4 709 31275 92 10 7 chr17 16359171 16362862 -78909789 - L1_Mus1 LINE L1 0 6567 2889 4 709 756 22 0 0 chr17 16362862 16362952 -78909699 + (TTTC)n Simple_repeat Simple_repeat 3 92 0 4 709 31275 102 13 8 chr17 16362952 16364531 -78908120 - L1_Mus1 LINE L1 -2995 2888 1271 4 709 207 0 0 0 chr17 16364531 16364554 -78908097 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 709 989 130 0 0 chr17 16364554 16364692 -78907959 - B1_Mus1 SINE Alu -10 138 1 4 709 31275 166 54 60 chr17 16364692 16365504 -78907147 - L1_Mus1 LINE L1 -4613 1270 467 4 709 1481 101 0 58 chr17 16365552 16365795 -78906856 + L1Md_F2 LINE L1 6354 6582 0 4 709 387 113 0 0 chr17 16367127 16367189 -78905462 + (TA)n Simple_repeat Simple_repeat 1 62 0 4 709 234 0 0 0 chr17 16368872 16368898 -78903753 + (T)n Simple_repeat Simple_repeat 1 26 0 4 709 22 0 0 0 chr17 16368949 16368971 -78903680 + AT_rich Low_complexity Low_complexity 1 22 0 4 709 270 156 0 0 chr17 16369276 16369340 -78903311 + CT-rich Low_complexity Low_complexity 1 64 0 4 709 255 161 31 31 chr17 16369365 16369429 -78903222 + (CATATA)n Simple_repeat Simple_repeat 2 65 0 4 709 530 291 39 5 chr17 16369439 16369646 -78903005 - Lx7 LINE L1 -1792 5904 5691 5 709 289 222 112 56 chr17 16369879 16370006 -78902645 - L1_Rod LINE L1 -689 5435 5278 5 709 2578 206 93 5 chr17 16370010 16370590 -78902061 - Lx2B LINE L1 -10 6990 6360 5 709 2555 161 11 2 chr17 16370585 16371053 -78901598 + Lx2B LINE L1 5827 6298 -702 5 709 1066 281 56 20 chr17 16371056 16371503 -78901148 + L1M2 LINE L1 4810 5272 -871 5 709 340 287 41 0 chr17 16371568 16371690 -78900961 + L1M2 LINE L1 5648 5774 -526 5 709 1069 78 14 0 chr17 16371699 16371840 -78900811 + B1_Mm SINE Alu 2 144 -3 5 709 213 65 0 0 chr17 16371840 16371871 -78900780 + (CCAA)n Simple_repeat Simple_repeat 2 32 0 5 709 24 53 0 0 chr17 16372158 16372196 -78900455 + AT_rich Low_complexity Low_complexity 1 38 0 5 709 3790 27 2 0 chr17 16372764 16373207 -78899444 + L1Md_F2 LINE L1 6123 6566 -16 5 709 1620 78 9 0 chr17 16373227 16373446 -78899205 + L1_Mus1 LINE L1 6346 6566 -1 5 709 21 36 0 0 chr17 16373781 16373809 -78898842 + AT_rich Low_complexity Low_complexity 1 28 0 5 709 21 0 0 0 chr17 16375502 16375523 -78897128 + AT_rich Low_complexity Low_complexity 1 21 0 5 709 194 296 37 0 chr17 16376205 16376259 -78896392 + L2a LINE L2 3301 3356 -70 5 709 561 211 77 33 chr17 16376400 16376581 -78896070 + Lx7 LINE L1 7175 7363 -333 5 709 27 62 0 0 chr17 16376696 16376744 -78895907 + AT_rich Low_complexity Low_complexity 1 48 0 5 709 300 154 0 0 chr17 16376759 16376811 -78895840 + A-rich Low_complexity Low_complexity 4 55 0 5 709 513 226 73 29 chr17 16376831 16376968 -78895683 + B1_Mur2 SINE Alu 6 148 -1 5 709 326 93 37 0 chr17 16377023 16377077 -78895574 + (TCTCC)n Simple_repeat Simple_repeat 5 60 0 5 709 1244 269 105 22 chr17 16377284 16377789 -78894862 - Lx9 LINE L1 -20 7624 7078 5 709 1122 191 26 51 chr17 16377789 16378349 -78894302 - RMER17C LTR ERVK -520 438 1 5 709 3203 214 76 56 chr17 16378431 16378880 -78893771 + L1_Mur3 LINE L1 10 455 -7257 5 709 2480 160 52 62 chr17 16378880 16379414 -78893237 - RLTR24 LTR ERV1 0 529 1 5 709 3203 214 76 56 chr17 16379414 16379847 -78892804 + L1_Mur3 LINE L1 456 904 -6808 5 709 799 89 88 15 chr17 16379847 16379984 -78892667 + B1_Mm SINE Alu 1 147 0 5 709 3203 214 76 56 chr17 16379984 16380008 -78892643 + L1_Mur3 LINE L1 905 935 -6777 5 709 180 0 0 0 chr17 16380014 16380034 -78892617 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 5 709 249 57 0 0 chr17 16380047 16380082 -78892569 + (A)n Simple_repeat Simple_repeat 1 35 0 5 709 8572 162 63 66 chr17 16380089 16381031 -78891620 + L1_Mur3 LINE L1 868 1761 -4119 5 709 1493 72 0 10 chr17 16381031 16381240 -78891411 + L1Md_F2 LINE L1 6366 6572 -10 5 709 920 63 16 0 chr17 16381244 16381371 -78891280 + (GAAAA)n Simple_repeat Simple_repeat 2 130 0 5 709 8572 163 52 63 chr17 16381371 16381441 -78891210 + L1_Mur3 LINE L1 1762 1830 -4050 5 709 1135 210 4 4 chr17 16381441 16381666 -78890985 + URR1A DNA MER1_type 2 226 0 5 709 8572 163 52 63 chr17 16381666 16382986 -78889665 + L1_Mur3 LINE L1 1831 3215 -2665 5 709 50 59 0 0 chr17 16382986 16383071 -78889580 + AT_rich Low_complexity Low_complexity 1 85 0 5 709 1043 51 0 21 chr17 16383080 16383091 -78889560 - B1_Mm SINE Alu 0 147 139 5 709 207 0 0 0 chr17 16383091 16383114 -78889537 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 709 1043 51 0 21 chr17 16383114 16383243 -78889408 - B1_Mm SINE Alu -9 138 10 5 709 1210 194 56 53 chr17 16383248 16383569 -78889082 + Lx7 LINE L1 7367 7688 -8 5 88 1993 121 62 0 chr17 16383905 16384212 -78888439 - ORR1A3 LTR MaLR 0 326 1 5 710 207 0 0 0 chr17 16384325 16384348 -78888303 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 710 22 35 0 0 chr17 16384495 16384524 -78888127 + AT_rich Low_complexity Low_complexity 1 29 0 5 710 267 31 0 0 chr17 16385060 16385092 -78887559 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 5 710 34 42 0 0 chr17 16385384 16385432 -78887219 + AT_rich Low_complexity Low_complexity 1 48 0 5 710 256 269 15 0 chr17 16386082 16386149 -78886502 + GA-rich Low_complexity Low_complexity 3 70 0 5 710 5496 217 72 16 chr17 16386676 16388076 -78884575 - Lx9 LINE L1 -1 7643 6165 5 710 1575 201 30 128 chr17 16388117 16388584 -78884067 - MTC LTR MaLR 0 421 1 5 710 482 0 17 0 chr17 16390224 16390282 -78882369 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 710 330 258 76 30 chr17 16390363 16390495 -78882156 - L1ME3 LINE L1 -106 6056 5919 5 710 340 291 43 69 chr17 16390574 16390851 -78881800 - L1ME3 LINE L1 -351 5811 5542 5 710 28 0 0 0 chr17 16391081 16391109 -78881542 + AT_rich Low_complexity Low_complexity 1 28 0 5 710 353 240 130 16 chr17 16391123 16391246 -78881405 + MLT1C LTR MaLR 1 137 -330 5 710 252 0 0 0 chr17 16392254 16392282 -78880369 + (TTCC)n Simple_repeat Simple_repeat 1 28 0 5 710 1107 87 23 0 chr17 16392282 16392455 -78880196 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 5 710 1139 49 0 7 chr17 16392456 16392599 -78880052 - B1_Mus1 SINE Alu -6 142 1 5 710 1464 160 6 125 chr17 16393712 16394047 -78878604 + MT2A LTR ERVL 1 295 -238 5 710 427 227 0 64 chr17 16394054 16394195 -78878456 + MT2A LTR ERVL 402 533 0 5 710 192 158 0 0 chr17 16394576 16394614 -78878037 + A-rich Low_complexity Low_complexity 3 40 0 5 710 5548 138 34 5 chr17 16394845 16395716 -78876935 - Lx4A LINE L1 -3 7055 6159 5 710 806 295 66 31 chr17 16396777 16397231 -78875420 - Lx8 LINE L1 -28 7445 6976 5 710 21 0 0 0 chr17 16397254 16397275 -78875376 + AT_rich Low_complexity Low_complexity 1 21 0 5 710 33564 40 35 3 chr17 16397409 16403420 -78869231 - L1Md_T LINE L1 0 6585 268 5 710 1145 307 78 5 chr17 16403415 16403828 -78868823 - Lx8 LINE L1 -478 6995 6553 5 710 1319 229 130 16 chr17 16403828 16404197 -78868454 + MTD LTR MaLR 1 411 -8 5 710 925 296 47 51 chr17 16404213 16404305 -78868346 - Lx8 LINE L1 -928 6545 6460 5 710 1861 223 38 174 chr17 16404305 16405012 -78867639 - RMER19C LTR ERVK 0 611 1 5 710 925 296 47 51 chr17 16405012 16405386 -78867265 - Lx8 LINE L1 -1014 6459 6081 5 710 4794 13 0 0 chr17 16405845 16406379 -78866272 + L1Md_T LINE L1 6049 6582 0 5 710 24 53 0 0 chr17 16406930 16406968 -78865683 + AT_rich Low_complexity Low_complexity 1 38 0 5 710 1078 337 99 22 chr17 16407280 16408157 -78864494 - Lx8 LINE L1 -8 7465 6521 5 710 7216 76 6 8 chr17 16408170 16409448 -78863203 - L1_Mus1 LINE L1 -1 6566 5290 5 710 27443 104 29 6 chr17 16409455 16412431 -78860220 - L1_Mus1 LINE L1 0 6570 3481 5 710 243 0 0 0 chr17 16412431 16412458 -78860193 + (TTG)n Simple_repeat Simple_repeat 1 27 0 5 710 27443 114 32 6 chr17 16412458 16413907 -78858744 - L1_Mus1 LINE L1 -2406 3480 2010 5 710 4191 99 6 18 chr17 16413907 16414180 -78858471 - L1_Mus1 LINE L1 -1 6566 6303 5 710 3197 40 17 24 chr17 16414180 16414594 -78858057 - IAPLTR2a LTR ERVK 0 411 1 5 710 4191 99 6 18 chr17 16414594 16414945 -78857706 - L1_Mus1 LINE L1 -265 6302 5949 5 710 27443 114 23 11 chr17 16414945 16415885 -78856766 - L1_Mus1 LINE L1 -3877 2009 993 5 710 2083 225 57 50 chr17 16415853 16416837 -78855814 - L1_Mus1 LINE L1 -5433 1208 264 5 710 735 305 137 48 chr17 16416862 16417469 -78855182 - Lx8 LINE L1 -942 6531 5871 5 710 464 189 37 3 chr17 16417462 16417607 -78855044 + Lx8 LINE L1 5787 5942 -1702 5 710 191 116 47 0 chr17 16418579 16418622 -78854029 + (TCTCTG)n Simple_repeat Simple_repeat 4 48 0 5 710 1172 183 65 29 chr17 16418622 16418898 -78853753 + ORR1C2-int LTR MaLR 1085 1370 0 5 710 1407 212 37 87 chr17 16418909 16419312 -78853339 + ORR1C2 LTR MaLR 2 384 0 5 710 357 325 65 57 chr17 16419332 16419456 -78853195 + B4A SINE B4 3 127 -165 5 710 535 27 27 0 chr17 16419573 16419646 -78853005 + (TC)n Simple_repeat Simple_repeat 2 76 0 5 710 302 269 37 0 chr17 16419661 16419769 -78852882 + L1M2 LINE L1 4542 4653 -1490 5 710 2700 143 16 9 chr17 16420056 16420910 -78851741 + L1VL4 LINE L1 584 1484 -2430 5 710 569 95 0 0 chr17 16420908 16420992 -78851659 + L1VL4 LINE L1 2783 2866 -3017 5 710 2325 89 0 0 chr17 16420985 16421321 -78851330 + L1VL4 LINE L1 3898 4233 -1650 5 710 6373 172 47 7 chr17 16421334 16422956 -78849695 - Lx3C LINE L1 -2 6974 5318 5 710 11335 153 31 6 chr17 16422954 16425208 -78847443 - Lx3C LINE L1 -1639 4247 1939 5 710 32941 57 5 2 chr17 16425266 16427210 -78845441 - L1Md_F3 LINE L1 -13 6571 4623 5 710 3496 23 0 0 chr17 16427210 16427606 -78845045 - MTA_Mm LTR MaLR 0 396 1 5 710 9129 37 2 1 chr17 16427606 16428703 -78843948 - MTA_Mm-int LTR MaLR 0 1098 1 5 710 3500 23 0 0 chr17 16428703 16429099 -78843552 - MTA_Mm LTR MaLR 0 396 1 5 710 32941 82 17 3 chr17 16429099 16433289 -78839362 - L1Md_F3 LINE L1 -1261 4622 370 5 710 1944 184 36 18 chr17 16433280 16433860 -78838791 - Lx3C LINE L1 -4481 1405 835 5 710 368 206 0 0 chr17 16434149 16434217 -78838434 - Lx6 LINE L1 -774 6686 6619 5 710 622 223 29 62 chr17 16434216 16434426 -78838225 + Lx7 LINE L1 7494 7696 0 5 710 423 0 0 0 chr17 16435422 16435469 -78837182 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 710 820 262 28 5 chr17 16437421 16437632 -78835019 - B3 SINE B2 0 216 1 5 710 761 126 28 11 chr17 16437764 16437941 -78834710 + CT-rich Low_complexity Low_complexity 1 180 0 5 710 745 111 49 6 chr17 16437959 16438307 -78834344 + CT-rich Low_complexity Low_complexity 1 363 0 5 710 821 105 41 0 chr17 16438353 16438524 -78834127 + (TC)n Simple_repeat Simple_repeat 1 178 0 5 710 358 250 43 101 chr17 16438547 16438685 -78833966 - B4A SINE B4 0 292 163 5 710 2147 171 55 22 chr17 16438775 16439177 -78833474 - MTC LTR MaLR -6 415 1 5 710 341 231 15 0 chr17 16439179 16439244 -78833407 - B4A SINE B4 -226 66 1 5 710 419 101 29 0 chr17 16439352 16439421 -78833230 + (CATATA)n Simple_repeat Simple_repeat 5 75 0 5 710 268 232 214 62 chr17 16439450 16439585 -78833066 - MT2A LTR ERVL -90 443 242 5 710 453 36 0 0 chr17 16439610 16439665 -78832986 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 710 6038 96 15 0 chr17 16439665 16440542 -78832109 + L1_Mus1 LINE L1 5678 6567 0 5 710 1607 179 25 33 chr17 16440566 16441070 -78831581 + L1_Rod LINE L1 1160 1656 -4191 5 710 3840 233 86 67 chr17 16441047 16441485 -78831166 + L1_Rod LINE L1 2560 2988 -2859 5 710 1802 133 13 36 chr17 16441485 16441788 -78830863 + Lx3B LINE L1 6675 6970 -3 5 710 3840 233 86 67 chr17 16441788 16442954 -78829697 + L1_Rod LINE L1 2989 4194 -1653 5 710 2078 128 123 23 chr17 16442954 16443345 -78829306 + RLTR23 LTR ERV1 1 430 0 5 710 3840 233 86 67 chr17 16443345 16443705 -78828946 + L1_Rod LINE L1 4195 4561 -1286 5 710 1067 261 77 47 chr17 16443764 16443843 -78828808 - Lx7 LINE L1 -420 7276 7208 5 710 4931 35 130 0 chr17 16443843 16444472 -78828179 - L1Md_F2 LINE L1 0 6582 5872 5 710 1067 261 77 47 chr17 16444472 16444735 -78827916 - Lx7 LINE L1 -489 7207 6921 5 710 1665 142 81 62 chr17 16444735 16445058 -78827593 - ORR1A4 LTR MaLR 0 329 1 5 710 1067 261 77 47 chr17 16445058 16445079 -78827572 - Lx7 LINE L1 -776 6920 6901 5 710 558 110 83 0 chr17 16445086 16445195 -78827456 + L1_Mur3 LINE L1 4301 4418 -1462 5 710 21 82 0 0 chr17 16445339 16445388 -78827263 + AT_rich Low_complexity Low_complexity 1 49 0 5 710 21 71 0 0 chr17 16446546 16446588 -78826063 + AT_rich Low_complexity Low_complexity 1 42 0 5 710 210 308 142 0 chr17 16446797 16446917 -78825734 + MIR SINE MIR 120 256 -6 5 710 856 331 14 7 chr17 16447311 16447600 -78825051 - B4A SINE B4 0 292 2 5 710 373 152 26 79 chr17 16447893 16448007 -78824644 - Lx9 LINE L1 -1 7643 7536 5 710 22 56 0 0 chr17 16448111 16448147 -78824504 + AT_rich Low_complexity Low_complexity 1 36 0 5 710 21 36 0 0 chr17 16450212 16450240 -78822411 + AT_rich Low_complexity Low_complexity 1 28 0 5 710 225 309 29 0 chr17 16450334 16450402 -78822249 + (TTCA)n Simple_repeat Simple_repeat 3 72 0 5 710 571 67 22 0 chr17 16450420 16450509 -78822142 + (TCTA)n Simple_repeat Simple_repeat 3 93 0 6 710 485 313 54 18 chr17 16451401 16451567 -78821084 + B4 SINE B4 11 182 -110 6 710 361 265 69 25 chr17 16451747 16451906 -78820745 + L1MC2 LINE L1 5767 5932 -412 6 710 235 329 0 84 chr17 16451984 16452067 -78820584 - ID4 SINE ID -3 80 5 6 710 257 316 132 8 chr17 16452072 16452330 -78820321 + L1MC2 LINE L1 6052 6341 -1444 6 710 907 256 229 28 chr17 16453222 16453756 -78818895 - L1MA6 LINE L1 -295 6005 5365 6 710 342 356 10 0 chr17 16454110 16454211 -78818440 - ORR1E LTR MaLR -59 320 219 6 710 487 279 23 15 chr17 16454227 16454358 -78818293 - ORR1E LTR MaLR -227 132 1 6 710 189 94 0 0 chr17 16454380 16454412 -78818239 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 710 323 314 155 41 chr17 16454462 16454617 -78818034 - B4A SINE B4 -8 284 98 6 710 330 26 0 0 chr17 16454617 16454656 -78817995 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 710 288 0 0 0 chr17 16454656 16454687 -78817964 + (GA)n Simple_repeat Simple_repeat 1 32 0 6 710 323 314 155 41 chr17 16454687 16454749 -78817902 - B4A SINE B4 -195 97 42 6 710 4529 235 128 2 chr17 16455829 16457012 -78815639 - Lx9 LINE L1 -8 7636 6306 6 710 2824 207 100 31 chr17 16458148 16458669 -78813982 - Lx9 LINE L1 -1634 6010 5411 6 710 351 0 0 0 chr17 16458669 16458708 -78813943 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 710 2824 194 100 35 chr17 16458708 16459021 -78813630 - Lx9 LINE L1 -437 5410 5059 6 710 1748 145 98 0 chr17 16459262 16459559 -78813092 + ORR1A3 LTR MaLR 1 326 0 6 710 2154 232 92 40 chr17 16459697 16460470 -78812181 + Lx9 LINE L1 5034 5891 -1753 6 710 757 124 11 28 chr17 16460771 16460953 -78811698 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 6 710 1119 14 28 0 chr17 16460982 16461126 -78811525 + (TCTA)n Simple_repeat Simple_repeat 3 150 0 6 710 1389 306 123 26 chr17 16461160 16462340 -78810311 + Lx9 LINE L1 6339 7631 -13 6 710 441 81 0 0 chr17 16462372 16462434 -78810217 + (TG)n Simple_repeat Simple_repeat 2 63 0 6 710 4017 134 39 0 chr17 16462456 16463106 -78809545 - Lx LINE L1 -12 6642 5968 6 710 4758 94 18 10 chr17 16463106 16463828 -78808823 - MusHAL1 LINE L1 -1081 1631 904 6 710 1572 203 36 3 chr17 16463829 16464135 -78808516 - L1VL2 LINE L1 -5926 409 94 6 710 2999 201 50 0 chr17 16464158 16464744 -78807907 - Lx3C LINE L1 -4 6972 6358 6 710 2472 200 39 16 chr17 16464742 16465254 -78807397 - Lx3C LINE L1 -490 6486 5963 6 710 4609 131 7 3 chr17 16465427 16466133 -78806518 - Lx2 LINE L1 -1 6996 6288 6 710 244 208 10 10 chr17 16466623 16466720 -78805931 + CT-rich Low_complexity Low_complexity 1 97 0 6 710 230 0 33 0 chr17 16466766 16466796 -78805855 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 6 710 1153 61 0 0 chr17 16466804 16466951 -78805700 - B1_Mm SINE Alu 0 147 1 6 710 876 284 158 6 chr17 16467882 16468236 -78804415 + MLT1C LTR MaLR 3 410 -57 6 710 266 320 9 22 chr17 16468365 16468501 -78804150 + GA-rich Low_complexity Low_complexity 1 134 0 6 710 439 326 77 119 chr17 16468613 16468863 -78803788 - L2a LINE L2 0 3426 3171 6 710 718 261 43 10 chr17 16468863 16469072 -78803579 - B3 SINE B2 0 216 1 6 710 439 326 77 119 chr17 16469072 16469243 -78803408 - L2a LINE L2 -256 3170 3028 6 710 852 177 21 16 chr17 16469243 16469432 -78803219 + Lx4B LINE L1 6865 7054 -4 6 710 439 326 77 119 chr17 16469432 16469528 -78803123 - L2a LINE L2 -399 3027 2930 6 710 807 339 151 46 chr17 16469780 16470777 -78801874 - L2a LINE L2 -2255 1164 64 6 710 23 0 0 0 chr17 16471161 16471184 -78801467 + AT_rich Low_complexity Low_complexity 1 23 0 6 710 214 152 152 0 chr17 16471876 16471922 -78800729 - PB1D7 SINE Alu -3 117 65 6 710 612 227 84 0 chr17 16471885 16472004 -78800647 - ID_B1 SINE B4 -16 208 80 6 710 303 28 0 0 chr17 16472160 16472196 -78800455 + (TCCC)n Simple_repeat Simple_repeat 1 36 0 6 710 216 0 0 0 chr17 16472838 16472862 -78799789 + (CTG)n Simple_repeat Simple_repeat 3 26 0 6 710 269 326 21 0 chr17 16472889 16472984 -78799667 + MER5B DNA MER1_type 4 100 -78 6 710 206 251 35 60 chr17 16473017 16473084 -78799567 - L2c LINE L2 -2 3424 3332 6 710 327 324 88 34 chr17 16473769 16473916 -78798735 - MLT1J2 LTR MaLR -250 198 44 6 710 256 336 34 50 chr17 16474329 16474448 -78798203 - PB1D10 SINE Alu 0 117 1 6 710 369 294 112 22 chr17 16474503 16474726 -78797925 - L1MA6 LINE L1 -149 6151 5909 6 710 822 196 12 42 chr17 16474757 16474922 -78797729 - Lx7 LINE L1 -413 7283 7124 6 710 258 105 0 0 chr17 16474940 16474978 -78797673 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 6 710 180 77 0 0 chr17 16475001 16475027 -78797624 + (GAAA)n Simple_repeat Simple_repeat 4 29 0 6 710 260 348 108 29 chr17 16475123 16475327 -78797324 - MLT1F LTR MaLR -3 545 326 6 710 306 0 0 0 chr17 16477535 16477569 -78795082 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 710 977 116 7 0 chr17 16478890 16479045 -78793606 + (TTTC)n Simple_repeat Simple_repeat 2 157 0 6 710 2380 85 0 0 chr17 16479050 16479366 -78793285 - L1_Mus1 LINE L1 0 6567 6252 6 710 1624 91 0 0 chr17 16479373 16479594 -78793057 + L1_Mus1 LINE L1 6009 6229 -337 6 710 21 57 0 0 chr17 16480409 16480444 -78792207 + AT_rich Low_complexity Low_complexity 1 35 0 6 710 414 0 0 0 chr17 16480498 16480544 -78792107 + (TC)n Simple_repeat Simple_repeat 2 47 0 6 710 216 0 0 0 chr17 16480544 16480567 -78792084 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 710 183 229 62 0 chr17 16480686 16480734 -78791917 + L2 LINE L2 245 295 -3124 6 710 368 20 59 0 chr17 16481887 16481938 -78790713 + (TAAAA)n Simple_repeat Simple_repeat 3 56 0 6 710 27 29 0 0 chr17 16482076 16482110 -78790541 + AT_rich Low_complexity Low_complexity 1 34 0 6 710 407 255 52 0 chr17 16482163 16482316 -78790335 - L1MA5 LINE L1 -1 6299 6139 6 710 933 286 133 53 chr17 16482729 16483482 -78789169 - L1MA5 LINE L1 -160 6140 5328 6 710 319 209 65 30 chr17 16483543 16483644 -78789007 - L1M2c LINE L1 -3911 2934 2824 6 710 218 247 0 24 chr17 16484442 16484525 -78788126 + CT-rich Low_complexity Low_complexity 1 81 0 6 710 340 215 0 0 chr17 16484551 16484630 -78788021 - L1M2c LINE L1 -4779 2070 1992 6 710 23 54 0 0 chr17 16484630 16484667 -78787984 + AT_rich Low_complexity Low_complexity 1 37 0 6 710 2073 173 35 28 chr17 16484775 16485203 -78787448 + BGLII_B LTR ERVK 1 431 -10 6 710 261 0 0 0 chr17 16485337 16485366 -78787285 + (T)n Simple_repeat Simple_repeat 1 29 0 6 710 32560 97 27 12 chr17 16485653 16491830 -78780821 - L1Md_F2 LINE L1 -12 6570 297 6 710 257 329 7 21 chr17 16491972 16492115 -78780536 - L1M2c LINE L1 -5099 1750 1610 6 710 228 278 0 107 chr17 16493438 16493559 -78779092 - L1MB1 LINE L1 -31 6137 6030 6 710 519 60 0 0 chr17 16493668 16493735 -78778916 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 6 710 1214 259 47 108 chr17 16493735 16494056 -78778595 + RLTR11A LTR ERVK 12 366 -211 6 710 1177 177 12 17 chr17 16494056 16494297 -78778354 + Lx LINE L1 6413 6652 -2 6 710 1214 246 32 119 chr17 16494297 16494487 -78778164 + RLTR11A LTR ERVK 340 519 -9 6 710 566 94 25 8 chr17 16494505 16494623 -78778028 + (TCTA)n Simple_repeat Simple_repeat 2 121 0 6 710 190 326 21 43 chr17 16495741 16495834 -78776817 - MIRb SINE MIR -32 236 146 6 710 216 301 14 14 chr17 16496159 16496233 -78776418 + GA-rich Low_complexity Low_complexity 5 78 0 6 710 6910 119 8 0 chr17 16496333 16497354 -78775297 - L1_Mm LINE L1 -81 5802 4774 6 710 431 281 103 139 chr17 16498190 16498492 -78774159 - MER2 DNA MER2_type -53 292 2 6 710 182 299 14 29 chr17 16498849 16498918 -78773733 - L2b LINE L2 -376 2999 2932 6 710 253 351 123 26 chr17 16500318 16500473 -78772178 + MER20 DNA MER1_type 46 215 -4 1 710 264 59 0 0 chr17 16500871 16500905 -78771746 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 2 710 271 284 93 16 chr17 16501369 16501498 -78771153 + CR1_Mam LINE CR1 321 459 -1745 3 710 8764 13 0 5 chr17 16501614 16502840 -78769811 - L1Md_A LINE L1 0 6582 5362 4 710 16989 12 1 1 chr17 16502817 16504772 -78767879 + L1Md_A LINE L1 3402 5356 -527 4 710 829 295 48 27 chr17 16504764 16505057 -78767594 - Lx8 LINE L1 -960 6513 6215 5 710 23 33 0 0 chr17 16507267 16507297 -78765354 + AT_rich Low_complexity Low_complexity 1 30 0 6 710 1947 51 16 4 chr17 16507379 16507633 -78765018 + L1Md_F3 LINE L1 6325 6581 -3 7 710 3044 88 7 0 chr17 16508930 16509348 -78763303 - BGLII LTR ERVK 0 421 1 8 710 1393 103 0 0 chr17 16509422 16509625 -78763026 + Lx LINE L1 6449 6651 -3 9 710 2237 215 24 22 chr17 16510300 16510848 -78761803 + Lx9 LINE L1 5262 5810 -37 1 710 3965 70 11 24 chr17 16510865 16511438 -78761213 - RLTR13D1 LTR ERVK -15 791 227 1 710 3097 137 34 24 chr17 16511411 16511949 -78760702 - RLTR13D1 LTR ERVK -359 543 1 1 710 3253 303 45 41 chr17 16512081 16512902 -78759749 + Lx9 LINE L1 6110 6946 -698 1 710 2050 182 76 8 chr17 16512902 16513296 -78759355 + MTC LTR MaLR 1 421 0 1 710 3253 303 45 41 chr17 16513296 16513796 -78758855 + Lx9 LINE L1 6947 7436 -208 1 710 225 0 0 0 chr17 16513826 16513851 -78758800 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 710 708 92 0 0 chr17 16513851 16513969 -78758682 + (GA)n Simple_repeat Simple_repeat 2 120 0 1 710 22 35 0 0 chr17 16514819 16514848 -78757803 + AT_rich Low_complexity Low_complexity 1 29 0 1 711 207 308 53 32 chr17 16515992 16516086 -78756565 + L2a LINE L2 3314 3409 -17 1 711 471 112 0 0 chr17 16516919 16516999 -78755652 + (T)n Simple_repeat Simple_repeat 1 80 0 1 711 1161 88 0 0 chr17 16516999 16517147 -78755504 - B1_Mus1 SINE Alu 0 148 1 1 711 24 0 0 0 chr17 16517148 16517172 -78755479 + AT_rich Low_complexity Low_complexity 1 24 0 1 711 1483 88 5 14 chr17 16517305 16517525 -78755126 - Lx2 LINE L1 -2 6995 6778 2 711 194 282 96 30 chr17 16518067 16518202 -78754449 + L3b LINE CR1 148 291 -191 2 711 2894 241 99 28 chr17 16518377 16519471 -78753180 - L1_Mur3 LINE L1 -600 5283 4017 2 711 180 292 27 27 chr17 16520086 16520160 -78752491 - L3 LINE CR1 -3405 1084 1011 2 711 2600 286 43 30 chr17 16520486 16521483 -78751168 - RMER16-int LTR ERVK -417 4989 3980 2 711 3597 300 28 33 chr17 16521719 16523590 -78749061 - RMER16-int LTR ERVK -1427 3979 2118 2 711 1612 202 89 20 chr17 16523591 16523949 -78748702 + RLTR20A LTR ERVK 1 383 -158 2 711 883 251 15 10 chr17 16523944 16524141 -78748510 + B3 SINE B2 19 216 0 2 711 26 0 0 0 chr17 16524150 16524176 -78748475 + AT_rich Low_complexity Low_complexity 1 26 0 2 711 213 94 0 0 chr17 16525028 16525060 -78747591 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 711 260 362 14 19 chr17 16525087 16525258 -78747393 + MLT1L LTR MaLR 421 607 -3 2 711 25 0 0 0 chr17 16525361 16525386 -78747265 + AT_rich Low_complexity Low_complexity 1 25 0 3 711 38058 43 0 3 chr17 16525386 16531848 -78740803 - L1Md_T LINE L1 0 6585 44 3 711 1086 267 148 37 chr17 16533264 16533996 -78738655 - L1MA8 LINE L1 -96 6195 5383 3 711 26 0 0 0 chr17 16534412 16534438 -78738213 + AT_rich Low_complexity Low_complexity 1 26 0 3 711 2244 78 119 11 chr17 16534650 16535002 -78737649 - RLTR10 LTR ERVK 0 390 1 3 711 8139 102 20 10 chr17 16535427 16537381 -78735270 + L1Md_F LINE L1 387 2361 -3522 3 711 1653 112 1 9 chr17 16537349 16537625 -78735026 + L1Md_F LINE L1 3467 3768 -2378 3 711 1165 68 0 0 chr17 16538684 16538830 -78733821 + B1_Mus1 SINE Alu 3 148 0 3 711 213 121 0 0 chr17 16539048 16539081 -78733570 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 711 393 303 30 0 chr17 16540981 16541080 -78731571 + RSINE1 SINE B4 3 104 -61 3 711 916 17 17 8 chr17 16541115 16541233 -78731418 + (TAGA)n Simple_repeat Simple_repeat 4 122 0 3 711 252 59 0 0 chr17 16541703 16541737 -78730914 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 711 41079 5 0 0 chr17 16541821 16548106 -78724545 - L1Md_A LINE L1 0 6582 296 4 711 2171 189 61 85 chr17 16548292 16548918 -78723733 - RMER19C LTR ERVK 0 611 1 4 711 350 267 38 0 chr17 16549259 16549364 -78723287 - Lx6 LINE L1 -5 7455 7347 4 711 2211 192 52 6 chr17 16549383 16549859 -78722792 - L1_Mur3 LINE L1 -3303 2577 2080 4 711 2042 159 27 10 chr17 16549851 16550257 -78722394 - L1_Mur3 LINE L1 -4250 1630 1218 4 711 189 0 0 0 chr17 16550257 16550278 -78722373 + (CATTT)n Simple_repeat Simple_repeat 4 24 0 4 711 522 241 115 5 chr17 16550278 16550352 -78722299 - L1_Mur3 LINE L1 -5869 1217 1125 4 711 1469 251 135 13 chr17 16550337 16551096 -78721555 - L1_Mur3 LINE L1 -6785 943 92 4 711 520 310 110 27 chr17 16551096 16551315 -78721336 - B4A SINE B4 -55 237 1 4 711 359 335 111 41 chr17 16551388 16551739 -78720912 - MLT1A1 LTR MaLR -1 407 1 4 711 815 237 88 0 chr17 16552966 16553194 -78719457 - Lx2B LINE L1 -3 6997 6750 4 711 219 227 0 0 chr17 16553550 16553616 -78719035 + (TG)n Simple_repeat Simple_repeat 2 67 0 4 711 224 295 0 16 chr17 16554025 16554087 -78718564 + GA-rich Low_complexity Low_complexity 1 61 0 5 711 192 111 36 18 chr17 16555056 16555111 -78717540 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 711 211 220 0 0 chr17 16555408 16555458 -78717193 + A-rich Low_complexity Low_complexity 6 55 0 5 711 30181 114 14 6 chr17 16556564 16562719 -78709932 - L1_Mus1 LINE L1 0 6567 355 5 711 267 204 0 0 chr17 16563237 16563281 -78709370 + RMER30 DNA MER1_type 8 51 -151 5 711 182 246 17 50 chr17 16563351 16563411 -78709240 - MER5A DNA MER1_type -89 100 43 5 711 504 344 139 73 chr17 16564275 16564770 -78707881 + MER21B LTR ERV1 292 819 -44 5 711 3048 38 13 0 chr17 16565198 16565570 -78707081 + L1Md_F3 LINE L1 6191 6567 -17 5 711 387 0 0 0 chr17 16566043 16566086 -78706565 + (GA)n Simple_repeat Simple_repeat 2 44 0 5 711 881 61 117 36 chr17 16566680 16566817 -78705834 - B1_Mus1 SINE Alu 0 148 1 5 711 225 0 0 0 chr17 16567030 16567055 -78705596 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 711 235 235 29 14 chr17 16567089 16567158 -78705493 + (TG)n Simple_repeat Simple_repeat 2 71 0 6 711 553 92 10 10 chr17 16567196 16567295 -78705356 + (TG)n Simple_repeat Simple_repeat 2 100 0 6 711 22 0 0 0 chr17 16568721 16568743 -78703908 + AT_rich Low_complexity Low_complexity 1 22 0 6 711 21 36 0 0 chr17 16568882 16568910 -78703741 + AT_rich Low_complexity Low_complexity 1 28 0 6 711 1111 133 35 0 chr17 16569175 16569348 -78703303 + B2_Mm1t SINE B2 1 179 -14 6 711 438 129 248 52 chr17 16569348 16569505 -78703146 + B2_Mm2 SINE B2 2 186 -9 6 711 180 111 0 0 chr17 16569759 16569786 -78702865 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 6 711 932 246 256 0 chr17 16569796 16570093 -78702558 - MT2A LTR ERVL -79 454 82 6 711 2621 248 26 18 chr17 16570102 16570728 -78701923 + Lx6 LINE L1 6455 7439 -21 6 711 616 185 0 17 chr17 16570730 16570846 -78701805 - MT2A LTR ERVL -412 121 8 6 711 5049 108 47 14 chr17 16571733 16572528 -78700123 - Lx LINE L1 -7 6647 5827 6 711 12945 157 120 75 chr17 16572539 16574337 -78698314 - L1_Mus1 LINE L1 -2 6565 4547 6 711 309 270 72 27 chr17 16574337 16574489 -78698162 + B3 SINE B2 66 216 0 7 711 12945 157 120 75 chr17 16574489 16575851 -78696800 - L1_Mus1 LINE L1 -2021 4546 3018 6 711 487 254 80 101 chr17 16575851 16575897 -78696754 + B4 SINE B4 40 81 -211 7 711 994 117 0 0 chr17 16575897 16576042 -78696609 + B1_Mm SINE Alu 3 147 0 7 711 12945 157 120 75 chr17 16576042 16577655 -78694996 - L1_Mus1 LINE L1 -2 3017 1203 6 711 3778 106 89 0 chr17 16577621 16578215 -78694436 - L1Md_F LINE L1 -5380 1139 493 7 711 324 306 58 0 chr17 16578721 16578842 -78693809 + L1MC2 LINE L1 6026 6153 -191 7 711 295 288 27 9 chr17 16579073 16579185 -78693466 + MER45R DNA Tip100 526 639 -942 7 711 620 224 23 46 chr17 16579267 16579440 -78693211 + Lx9 LINE L1 6309 6477 -1167 7 711 548 101 34 0 chr17 16579439 16579528 -78693123 - L1_Mus1 LINE L1 -563 6004 5913 7 711 4362 81 2 2 chr17 16579528 16580111 -78692540 + L1_Mus1 LINE L1 5985 6567 0 7 711 2214 228 87 11 chr17 16580124 16580678 -78691973 + Lx9 LINE L1 6462 7057 -587 7 711 883 266 62 10 chr17 16580721 16581028 -78691623 + Lx9 LINE L1 7176 7498 -146 7 711 238 228 0 0 chr17 16581266 16581280 -78691371 + polypurine Low_complexity Low_complexity 3 16 0 7 711 1200 111 0 0 chr17 16581280 16581460 -78691191 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 7 711 238 228 0 0 chr17 16581460 16581502 -78691149 + polypurine Low_complexity Low_complexity 17 58 0 8 711 3540 43 0 0 chr17 16582856 16583277 -78689374 - L1_Mus1 LINE L1 -4 6563 6143 8 711 711 173 49 6 chr17 16583680 16583843 -78688808 - Lx7 LINE L1 0 7696 7527 8 711 455 182 34 0 chr17 16583864 16583952 -78688699 - Lx7 LINE L1 -693 7003 6913 8 711 3790 213 72 57 chr17 16584170 16584289 -78688362 - Lx9 LINE L1 -2 7642 7517 8 711 243 0 0 0 chr17 16584289 16584316 -78688335 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 711 3790 227 113 63 chr17 16584316 16585464 -78687187 - Lx9 LINE L1 -128 7516 6316 8 711 447 312 36 72 chr17 16585724 16585890 -78686761 + RSINE1 SINE B4 6 165 0 8 711 241 344 53 37 chr17 16585890 16585914 -78686737 + B3A SINE B2 5 197 -1 8 711 819 293 56 0 chr17 16586117 16586438 -78686213 - L1MC3 LINE L1 -132 7653 7315 8 711 21 36 0 0 chr17 16586704 16586732 -78685919 + AT_rich Low_complexity Low_complexity 1 28 0 8 711 303 298 0 0 chr17 16587312 16587406 -78685245 - L1M3 LINE L1 -501 5670 5577 8 711 561 298 98 87 chr17 16588066 16588412 -78684239 - ORR1E LTR MaLR 0 359 10 9 711 587 340 40 6 chr17 16588424 16588747 -78683904 + L1MB7 LINE L1 5840 6173 -11 9 711 256 234 0 15 chr17 16588878 16588970 -78683681 + (TA)n Simple_repeat Simple_repeat 1 90 0 9 711 25 83 0 0 chr17 16589911 16589971 -78682680 + AT_rich Low_complexity Low_complexity 1 60 0 9 711 937 148 59 0 chr17 16590672 16590874 -78681777 + Lx9 LINE L1 7424 7637 -7 9 711 579 169 82 28 chr17 16591369 16591551 -78681100 - Lx9 LINE L1 0 7644 7453 9 711 308 215 32 32 chr17 16591560 16591767 -78680884 + (TATAA)n Simple_repeat Simple_repeat 1 207 0 9 711 241 247 111 0 chr17 16592107 16592188 -78680463 + L1MA5 LINE L1 6201 6290 -10 9 711 505 319 67 99 chr17 16592275 16592619 -78680032 + MTEa LTR MaLR 3 335 -44 9 711 22 0 0 0 chr17 16592682 16592704 -78679947 + AT_rich Low_complexity Low_complexity 1 22 0 9 711 219 69 0 0 chr17 16592967 16592996 -78679655 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 711 282 231 96 32 chr17 16593052 16593177 -78679474 + MER2 DNA MER2_type 86 218 -127 1 711 333 316 159 36 chr17 16594787 16595253 -78677398 + L1MD LINE L1 4037 4559 -1587 1 711 6708 105 59 1 chr17 16595254 16596529 -78676122 - L1_Mus3 LINE L1 -2 6636 5289 1 711 294 370 17 78 chr17 16596554 16596631 -78676020 - MLT1A0 LTR MaLR -164 201 133 1 711 1780 110 162 27 chr17 16596631 16596996 -78675655 - RLTR9F LTR ERVK 0 415 2 1 711 294 370 17 78 chr17 16596996 16597097 -78675554 - MLT1A0 LTR MaLR -233 132 34 1 711 1343 274 78 11 chr17 16597367 16597739 -78674912 + MTC LTR MaLR 23 419 -2 1 711 1338 268 45 33 chr17 16597779 16598199 -78674452 + Lx8 LINE L1 7047 7471 -2 1 711 857 174 26 26 chr17 16598285 16598474 -78674177 - B2_Mm2 SINE B2 -5 190 2 1 711 22 35 0 0 chr17 16598764 16598793 -78673858 + AT_rich Low_complexity Low_complexity 1 29 0 1 711 21 0 0 0 chr17 16598805 16598826 -78673825 + AT_rich Low_complexity Low_complexity 1 21 0 1 711 2362 187 81 21 chr17 16599062 16599591 -78673060 - RLTR31_Mm LTR ERVK 0 561 1 1 711 671 216 174 4 chr17 16599799 16600046 -78672605 + Lx9 LINE L1 7355 7643 -1 1 711 8280 41 3 1 chr17 16600811 16602487 -78670164 - L1Md_F2 LINE L1 0 6582 4903 1 711 265 327 235 0 chr17 16603478 16603636 -78669015 - MIRc SINE MIR -36 232 35 1 711 1232 217 175 113 chr17 16603772 16604338 -78668313 - MT2B LTR ERVL 0 601 1 1 711 793 178 38 27 chr17 16604924 16605109 -78667542 + B2_Mm2 SINE B2 1 187 -8 1 711 1544 306 8 48 chr17 16605132 16605636 -78667015 + Lx8 LINE L1 6236 6719 -754 1 711 819 200 78 6 chr17 16605641 16605807 -78666844 + ORR1C1 LTR MaLR 199 376 -2 1 711 227 401 57 32 chr17 16605807 16605960 -78666691 - LTR16C LTR ERVL -254 235 79 1 711 240 279 147 0 chr17 16606081 16606149 -78666502 + ID4_ SINE ID 2 79 -4 1 711 312 316 30 68 chr17 16606399 16606564 -78666087 - MIR SINE MIR -6 262 98 1 711 326 311 106 10 chr17 16607643 16607747 -78664904 - PB1D10 SINE Alu -2 125 12 1 711 7767 87 2 10 chr17 16607807 16609064 -78663587 - L1_Mus4 LINE L1 0 6636 5403 1 711 363 143 39 13 chr17 16610154 16610232 -78662419 + L1M3 LINE L1 4583 4662 -1478 1 711 275 132 141 37 chr17 16610233 16610318 -78662333 + L1MB1 LINE L1 6018 6112 -56 1 711 1698 246 33 19 chr17 16610910 16611340 -78661311 + RMER5 LTR ERV1 88 523 -11 1 711 253 192 25 99 chr17 16611440 16611521 -78661130 + PB1D10 SINE Alu 43 117 0 1 711 22 0 0 0 chr17 16612255 16612277 -78660374 + AT_rich Low_complexity Low_complexity 1 22 0 1 711 645 105 0 0 chr17 16612591 16612686 -78659965 + (TTCC)n Simple_repeat Simple_repeat 3 97 0 1 711 1840 122 46 43 chr17 16612823 16613149 -78659502 - Lx3C LINE L1 -7 6969 6643 1 711 673 125 0 16 chr17 16613465 16613587 -78659064 + (TTTC)n Simple_repeat Simple_repeat 3 122 0 1 711 8313 120 55 24 chr17 16614368 16614695 -78657956 - Lx3A LINE L1 -8 6973 6655 1 711 180 0 0 0 chr17 16614695 16614715 -78657936 + (TCC)n Simple_repeat Simple_repeat 2 21 0 1 711 8313 117 34 15 chr17 16614715 16615876 -78656775 - Lx3A LINE L1 -327 6654 5446 1 711 1940 132 0 0 chr17 16615876 16616172 -78656479 + L1_Mur1 LINE L1 5292 5587 -299 1 711 25 0 0 0 chr17 16616611 16616636 -78656015 + AT_rich Low_complexity Low_complexity 1 25 0 1 711 341 237 102 10 chr17 16616929 16617027 -78655624 - MLT1D LTR MaLR -16 489 383 1 711 23 0 0 0 chr17 16617073 16617096 -78655555 + AT_rich Low_complexity Low_complexity 1 23 0 1 711 4017 114 8 10 chr17 16617096 16617698 -78654953 - Lx LINE L1 -1 6653 6053 1 711 469 332 26 39 chr17 16617702 16617934 -78654717 - MLT1D LTR MaLR -264 241 13 1 711 189 74 0 0 chr17 16619450 16619477 -78653174 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 711 630 263 43 21 chr17 16619562 16619702 -78652949 + B1_Mur2 SINE Alu 2 144 -5 1 711 369 0 0 0 chr17 16619940 16619981 -78652670 + (TC)n Simple_repeat Simple_repeat 1 41 0 1 711 459 0 0 0 chr17 16621467 16621518 -78651133 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 711 1667 223 15 9 chr17 16622866 16623330 -78649321 - Lx4B LINE L1 -79 6979 6412 1 711 356 323 59 123 chr17 16624758 16625147 -78647504 - MLT1A LTR MaLR -9 365 2 1 711 1812 167 89 31 chr17 16625325 16625684 -78646967 - RLTR14 LTR ERV1 0 382 3 1 711 377 227 0 0 chr17 16626619 16626694 -78645957 + RLTR24 LTR ERV1 1 75 -454 1 711 3339 30 5 2 chr17 16627606 16628001 -78644650 - MTA_Mm LTR MaLR 0 396 1 1 711 1028 260 138 31 chr17 16628394 16628673 -78643978 - Lx7 LINE L1 -4 7692 7407 1 711 675 0 0 0 chr17 16628673 16628748 -78643903 + (GAA)n Simple_repeat Simple_repeat 3 77 0 1 711 1028 260 138 31 chr17 16628748 16628881 -78643770 - Lx7 LINE L1 -290 7406 7237 1 711 3228 132 69 11 chr17 16628897 16629447 -78643204 - Lx2 LINE L1 -1 6996 6415 1 711 889 216 30 0 chr17 16629449 16629648 -78643003 - Lx7 LINE L1 -520 7176 6972 1 711 301 42 0 0 chr17 16630230 16630278 -78642373 + Lx LINE L1 6600 6647 -7 1 711 195 246 66 0 chr17 16630572 16630633 -78642018 - MIRc SINE MIR -2 266 202 1 711 1747 143 54 65 chr17 16632923 16633275 -78639376 + Lx3B LINE L1 6275 6972 -1 1 711 253 286 69 35 chr17 16633812 16633928 -78638723 - L1MA4A LINE L1 -357 5946 5827 1 711 285 98 0 0 chr17 16633952 16633993 -78638658 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 711 532 277 8 48 chr17 16634012 16634137 -78638514 - RSINE1 SINE B4 -38 127 8 1 711 449 269 139 27 chr17 16634175 16634469 -78638182 - L1MA4A LINE L1 -485 5806 5480 1 711 197 132 26 0 chr17 16634469 16634507 -78638144 + CT-rich Low_complexity Low_complexity 1 39 0 1 711 251 277 50 8 chr17 16634587 16634707 -78637944 - L1MA4A LINE L1 -850 5450 5326 1 711 222 37 0 0 chr17 16634771 16634798 -78637853 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 1 711 250 199 296 7 chr17 16634799 16634941 -78637710 - L1MA4A LINE L1 -837 5306 5124 1 711 180 77 0 0 chr17 16634987 16635013 -78637638 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 711 366 260 0 0 chr17 16635160 16635233 -78637418 - B3 SINE B2 -84 132 60 1 711 553 274 80 31 chr17 16635280 16635506 -78637145 - L1MA4A LINE L1 -1188 4955 4719 1 711 261 0 0 0 chr17 16635766 16635795 -78636856 + (CAAAA)n Simple_repeat Simple_repeat 4 32 0 1 711 987 325 65 8 chr17 16637292 16637664 -78634987 - Lx8 LINE L1 -699 6774 6382 1 711 454 193 0 11 chr17 16637736 16637825 -78634826 + RLTR15 LTR ERVK 1 88 -271 1 711 1551 51 0 0 chr17 16637970 16638166 -78634485 - L1Md_T LINE L1 0 6582 6387 1 711 719 25 0 0 chr17 16638166 16638246 -78634405 + L1Md_F2 LINE L1 6299 6378 -204 1 711 675 318 30 38 chr17 16638666 16639044 -78633607 - Lx8 LINE L1 -1571 5902 5497 1 711 579 215 39 39 chr17 16639492 16639517 -78633134 + ID_B1 SINE B4 70 224 0 1 711 1010 54 0 0 chr17 16639517 16639647 -78633004 + B1_Mm SINE Alu 18 147 0 1 711 28 0 0 0 chr17 16639772 16639800 -78632851 + AT_rich Low_complexity Low_complexity 1 28 0 1 711 739 295 80 45 chr17 16639839 16640061 -78632590 - Lx7 LINE L1 -29 7444 7211 1 711 2796 178 43 20 chr17 16640061 16640616 -78632035 + RLTR12A LTR ERVK 1 568 0 1 711 739 295 80 45 chr17 16640616 16640769 -78631882 - Lx7 LINE L1 -263 7210 7056 1 711 4440 75 27 2 chr17 16640815 16641406 -78631245 - L1Md_F2 LINE L1 -12 6570 5965 1 711 3810 58 0 2 chr17 16641407 16641908 -78630743 + L1_Mm LINE L1 3887 4386 -1497 1 711 398 216 33 22 chr17 16641905 16641995 -78630656 - Lx7 LINE L1 -451 7022 6932 1 711 1879 242 13 0 chr17 16642024 16642404 -78630247 - Lx5 LINE L1 -99 6951 6567 1 711 451 250 25 152 chr17 16642407 16642605 -78630046 - Lx7 LINE L1 -564 6909 6737 1 711 1336 149 18 0 chr17 16642660 16642882 -78629769 - URR1A DNA MER1_type 0 226 1 1 711 620 273 0 0 chr17 16642978 16643106 -78629545 - B1_Mur1 SINE Alu -15 134 7 1 711 2159 270 36 35 chr17 16643123 16644212 -78628439 - Lx7 LINE L1 -1207 6266 5150 1 711 390 312 6 38 chr17 16644219 16644345 -78628306 + L1_Mur3 LINE L1 4965 5091 -789 1 711 1751 195 45 37 chr17 16644345 16644520 -78628131 - MTB_Mm LTR MaLR 0 407 229 1 711 651 13 0 0 chr17 16644520 16644596 -78628055 + (TTTTG)n Simple_repeat Simple_repeat 2 77 0 1 711 1751 195 45 37 chr17 16644596 16644824 -78627827 - MTB_Mm LTR MaLR -179 228 2 1 711 390 312 6 38 chr17 16644824 16644857 -78627794 + L1_Mur3 LINE L1 5092 5118 -762 1 711 33 25 0 0 chr17 16644867 16644907 -78627744 + AT_rich Low_complexity Low_complexity 1 40 0 1 711 2924 173 114 11 chr17 16644983 16645690 -78626961 + Lx9 LINE L1 6856 7635 -9 1 711 22 0 0 0 chr17 16645785 16645807 -78626844 + AT_rich Low_complexity Low_complexity 1 22 0 1 711 369 0 0 0 chr17 16645845 16645886 -78626765 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 711 267 347 0 0 chr17 16645892 16645964 -78626687 - ID4_ SINE ID -11 72 1 1 712 21 36 0 0 chr17 16647631 16647659 -78624992 + AT_rich Low_complexity Low_complexity 1 28 0 1 712 605 280 92 77 chr17 16647883 16648208 -78624443 + MTD LTR MaLR 25 354 -65 1 712 547 282 14 15 chr17 16648260 16648493 -78624158 + L1_Rod LINE L1 5020 5269 -874 1 712 1013 157 6 22 chr17 16648493 16648675 -78623976 + RMER13A LTR ERVK 682 860 0 1 712 367 343 35 0 chr17 16648675 16648818 -78623833 + Lx8 LINE L1 6586 6733 -740 1 712 384 21 0 0 chr17 16649174 16649189 -78623462 + (T)n Simple_repeat Simple_repeat 1 15 0 1 712 1641 31 0 0 chr17 16649189 16649381 -78623270 - B2_Mm1t SINE B2 0 193 2 1 712 384 21 0 0 chr17 16649381 16649412 -78623239 + (T)n Simple_repeat Simple_repeat 1 31 0 1 712 452 224 46 18 chr17 16650719 16650828 -78621823 + B3 SINE B2 1 112 -104 1 712 479 85 31 21 chr17 16650925 16651021 -78621630 + (TCTA)n Simple_repeat Simple_repeat 1 97 0 1 712 652 252 0 29 chr17 16651032 16651171 -78621480 - B1_Mur1 SINE Alu -10 139 5 1 712 39 50 0 0 chr17 16651237 16651297 -78621354 + AT_rich Low_complexity Low_complexity 1 60 0 1 712 216 0 0 0 chr17 16651836 16651860 -78620791 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 1 712 263 323 29 53 chr17 16651922 16652092 -78620559 - RLTR15 LTR ERVK -189 170 5 1 712 22 0 0 0 chr17 16652271 16652293 -78620358 + AT_rich Low_complexity Low_complexity 1 22 0 1 712 30 0 0 0 chr17 16654488 16654518 -78618133 + AT_rich Low_complexity Low_complexity 1 30 0 1 712 1369 161 230 6 chr17 16654711 16654868 -78617783 + ORR1C2 LTR MaLR 1 165 -219 2 712 564 15 0 0 chr17 16654868 16654933 -78617718 + (TC)n Simple_repeat Simple_repeat 2 66 0 2 712 1369 161 230 6 chr17 16654933 16655088 -78617563 + ORR1C2 LTR MaLR 166 382 -2 2 712 276 264 97 0 chr17 16655520 16655592 -78617059 + MLT1A LTR MaLR 33 111 -254 2 712 229 229 16 16 chr17 16655607 16655669 -78616982 + CT-rich Low_complexity Low_complexity 1 62 0 2 712 440 391 40 35 chr17 16655671 16655870 -78616781 + MLT1A LTR MaLR 174 373 -1 2 712 991 246 29 10 chr17 16655934 16656139 -78616512 + ORR1C2 LTR MaLR 95 303 -81 2 712 706 178 0 0 chr17 16656141 16656259 -78616392 + ORR1C2 LTR MaLR 229 346 -38 2 712 651 262 89 34 chr17 16656306 16656543 -78616108 + RLTR20C LTR ERVK 145 394 -140 2 712 4379 143 40 0 chr17 16656552 16657204 -78615447 + Lx2 LINE L1 6209 6867 -130 2 712 357 24 0 0 chr17 16657204 16657246 -78615405 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 712 4379 143 40 0 chr17 16657246 16657300 -78615351 + Lx2 LINE L1 6868 6942 -55 2 712 615 245 93 28 chr17 16657323 16657336 -78615315 + RLTR20C LTR ERVK 351 364 -214 2 712 1130 117 6 0 chr17 16657336 16657515 -78615136 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 712 750 239 90 3 chr17 16657515 16657625 -78615026 + RLTR20C LTR ERVK 329 482 -96 2 712 492 99 0 0 chr17 16657625 16657696 -78614955 + (TG)n Simple_repeat Simple_repeat 2 72 0 2 712 750 238 90 0 chr17 16657696 16657785 -78614866 + RLTR20C LTR ERVK 436 533 -1 2 712 575 141 0 11 chr17 16658270 16658363 -78614288 - BC1_Mm scRNA scRNA -60 92 1 2 712 572 174 0 0 chr17 16659950 16660048 -78612603 + B1_Mur2 SINE Alu 42 139 -10 2 712 446 229 7 65 chr17 16660134 16660288 -78612363 + L1_Rod LINE L1 5007 5151 -696 2 712 617 163 6 0 chr17 16660308 16660486 -78612165 + (TA)n Simple_repeat Simple_repeat 1 179 0 2 712 449 206 14 14 chr17 16660486 16660634 -78612017 + (TAGA)n Simple_repeat Simple_repeat 3 150 0 2 712 256 118 0 19 chr17 16660635 16660687 -78611964 + L1_Rod LINE L1 5166 5216 -631 2 712 913 243 64 0 chr17 16660725 16660976 -78611675 + Lx9 LINE L1 6794 7060 -584 2 712 758 195 0 16 chr17 16660978 16661103 -78611548 + B1_Mur2 SINE Alu 17 139 -10 2 712 498 17 0 0 chr17 16661111 16661170 -78611481 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 712 287 125 0 0 chr17 16661173 16661213 -78611438 + Lx9 LINE L1 7045 7084 -560 2 712 489 198 54 0 chr17 16661216 16661327 -78611324 - L1_Rod LINE L1 -6324 848 732 2 712 302 208 14 0 chr17 16661420 16661492 -78611159 - L1_Rod LINE L1 -6496 676 604 2 712 5232 75 0 14 chr17 16661509 16662212 -78610439 - L1Md_F2 LINE L1 -13 6569 5877 2 712 5240 65 1 0 chr17 16662213 16662878 -78609773 + L1Md_F2 LINE L1 5217 5882 -1 2 712 1011 290 113 17 chr17 16662876 16663353 -78609298 - L1_Rod LINE L1 -6564 608 86 2 712 2087 80 35 22 chr17 16663764 16664083 -78608568 - L1_Mus3 LINE L1 0 6638 6316 2 712 852 263 118 26 chr17 16664341 16664646 -78608005 + RLTR14 LTR ERV1 1 333 -49 2 712 3020 151 24 8 chr17 16664681 16665190 -78607461 + Lx3B LINE L1 6453 6969 -4 2 712 398 301 88 125 chr17 16665924 16666300 -78606351 - MLT1B LTR MaLR -9 381 20 2 712 415 304 63 141 chr17 16666665 16667063 -78605588 + MTEb LTR MaLR 7 373 -6 2 712 209 132 0 26 chr17 16667144 16667183 -78605468 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 2 712 1859 184 249 13 chr17 16667247 16667720 -78604931 - RMER4B LTR ERVK 0 585 1 2 712 319 114 0 0 chr17 16667965 16668009 -78604642 - Lx4B LINE L1 -494 6564 6521 2 712 21 0 0 0 chr17 16668010 16668031 -78604620 + AT_rich Low_complexity Low_complexity 1 21 0 2 712 3291 47 22 43 chr17 16668035 16668480 -78604171 - L1_Mus2 LINE L1 0 6566 6131 2 712 426 284 97 19 chr17 16669099 16669371 -78603280 + L1MA4 LINE L1 5609 5936 -364 2 712 538 203 14 0 chr17 16669393 16669536 -78603115 + (TA)n Simple_repeat Simple_repeat 1 145 0 2 712 209 284 10 10 chr17 16669553 16669649 -78603002 + (TA)n Simple_repeat Simple_repeat 2 97 0 2 712 283 319 90 77 chr17 16669775 16669975 -78602676 - MIR SINE MIR -32 236 26 2 712 603 324 0 0 chr17 16670059 16670207 -78602444 - RSINE1 SINE B4 -16 149 2 2 712 429 20 0 0 chr17 16670544 16670594 -78602057 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 712 22 0 0 0 chr17 16671496 16671518 -78601133 + AT_rich Low_complexity Low_complexity 1 22 0 2 712 249 33 0 0 chr17 16671589 16671619 -78601032 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 2 712 345 198 0 116 chr17 16672363 16672465 -78600186 - B1_Mur4 SINE Alu -20 100 10 2 712 338 134 88 19 chr17 16672567 16672727 -78599924 + (TA)n Simple_repeat Simple_repeat 1 171 0 2 712 420 311 74 19 chr17 16673098 16673206 -78599445 + PB1D7 SINE Alu 14 127 0 2 712 200 208 0 0 chr17 16674474 16674522 -78598129 + T-rich Low_complexity Low_complexity 1 48 0 2 712 6817 128 19 32 chr17 16674524 16676504 -78596147 - L1_Mus2 LINE L1 0 6566 4617 2 712 691 260 104 5 chr17 16678866 16679067 -78593584 + Lx6 LINE L1 7063 7283 -177 2 712 2121 144 65 11 chr17 16679068 16679439 -78593212 + RLTR9D LTR ERVK 1 391 -12 2 712 13995 230 31 32 chr17 16679448 16685145 -78587506 + ETnERV2-int LTR ERVK 4 6422 -984 2 712 7856 55 4 5 chr17 16685372 16686369 -78586282 - L1Md_F2 LINE L1 0 6582 5587 2 712 7114 50 4 0 chr17 16686375 16687280 -78585371 + L1_Mm LINE L1 3260 4168 -1715 2 712 495 252 15 15 chr17 16687280 16687417 -78585234 + Lx7 LINE L1 7560 7696 0 2 712 354 375 62 31 chr17 16687423 16687682 -78584969 + L1MC4a LINE L1 5592 5858 -2024 2 712 245 35 0 0 chr17 16687806 16687835 -78584816 - L1_Mus1 LINE L1 -572 5995 5967 2 712 4354 70 3 7 chr17 16687836 16688415 -78584236 + L1_Mus1 LINE L1 5991 6567 0 2 712 6123 41 5 1 chr17 16688421 16689178 -78583473 + L1Md_F2 LINE L1 5823 6582 0 2 712 1120 136 11 0 chr17 16689249 16689425 -78583226 + B2_Mm1t SINE B2 2 179 -14 2 712 24 67 0 0 chr17 16689503 16689548 -78583103 + AT_rich Low_complexity Low_complexity 1 45 0 2 712 29 28 0 0 chr17 16689668 16689704 -78582947 + AT_rich Low_complexity Low_complexity 1 36 0 2 712 362 270 33 75 chr17 16689715 16689835 -78582816 - RSINE1 SINE B4 0 165 51 2 712 21 0 0 0 chr17 16690657 16690678 -78581973 + AT_rich Low_complexity Low_complexity 1 21 0 2 712 21 0 0 0 chr17 16691589 16691610 -78581041 + AT_rich Low_complexity Low_complexity 1 21 0 2 712 242 325 51 8 chr17 16691844 16691962 -78580689 - L1M2 LINE L1 -572 5719 5597 2 712 2026 193 33 89 chr17 16691962 16692503 -78580148 + RLTR11A LTR ERVK 1 511 -17 2 712 784 301 104 16 chr17 16692611 16693445 -78579206 - L1M2 LINE L1 -819 5481 4564 2 712 195 129 0 0 chr17 16693795 16693826 -78578825 + (GGAA)n Simple_repeat Simple_repeat 1 31 0 2 712 23 33 0 0 chr17 16695033 16695063 -78577588 + AT_rich Low_complexity Low_complexity 1 30 0 2 712 526 237 0 0 chr17 16695196 16695293 -78577358 - B3 SINE B2 -1 215 119 2 712 6871 83 24 4 chr17 16696807 16697815 -78574836 + L1_Mur1 LINE L1 4316 5343 -543 2 712 2189 93 3 3 chr17 16697846 16698160 -78574491 + Lx3A LINE L1 6663 6976 -5 2 712 1107 134 0 0 chr17 16698212 16698391 -78574260 + (GGAGAA)n Simple_repeat Simple_repeat 1 179 0 2 712 507 202 0 0 chr17 16698392 16698506 -78574145 + GA-rich Low_complexity Low_complexity 3 116 0 2 712 310 246 0 0 chr17 16698711 16698776 -78573875 + L1MB3 LINE L1 6041 6105 -78 2 712 376 297 24 63 chr17 16699090 16699216 -78573435 - B1F SINE Alu -8 141 21 2 712 519 321 118 12 chr17 16699255 16699586 -78573065 - Lx9 LINE L1 -218 7426 7061 2 712 384 388 124 30 chr17 16700356 16700718 -78571933 - LTR16C LTR ERVL 0 489 94 2 712 278 360 35 53 chr17 16700882 16701108 -78571543 - LTR78 LTR ERV1 -350 954 733 2 712 3086 71 0 12 chr17 16702244 16702658 -78569993 + L1Md_F2 LINE L1 6161 6569 -13 2 712 456 51 0 0 chr17 16702681 16702740 -78569911 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 2 712 380 212 12 12 chr17 16702743 16702824 -78569827 + Lx9 LINE L1 7240 7320 -324 2 712 2521 168 0 5 chr17 16702817 16703253 -78569398 + Lx4B LINE L1 5148 5581 -305 2 712 2356 78 6 0 chr17 16703251 16703572 -78569079 - L1_Mus4 LINE L1 -621 6015 5693 2 712 4158 95 18 3 chr17 16703572 16704175 -78568476 + L1_Mus4 LINE L1 6025 6636 0 2 712 4696 213 100 27 chr17 16704175 16705356 -78567295 + Lx4B LINE L1 5783 7051 -7 2 712 30 0 0 0 chr17 16706225 16706255 -78566396 + AT_rich Low_complexity Low_complexity 1 30 0 2 712 351 309 200 0 chr17 16706344 16706574 -78566077 + B4A SINE B4 3 278 -14 2 712 252 122 0 0 chr17 16706667 16706708 -78565943 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 712 486 0 0 0 chr17 16706860 16706914 -78565737 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 712 22 0 0 0 chr17 16707431 16707453 -78565198 + AT_rich Low_complexity Low_complexity 1 22 0 2 712 27 0 0 0 chr17 16707769 16707796 -78564855 + AT_rich Low_complexity Low_complexity 1 27 0 2 712 24 0 0 0 chr17 16709070 16709094 -78563557 + AT_rich Low_complexity Low_complexity 1 24 0 2 712 441 308 55 0 chr17 16709476 16709622 -78563029 + RMER15 LTR ERVL 422 575 0 2 712 180 125 0 0 chr17 16710280 16710312 -78562339 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 712 553 320 27 7 chr17 16710340 16710488 -78562163 + RSINE1 SINE B4 4 154 -11 2 712 24 53 0 0 chr17 16710518 16710556 -78562095 + AT_rich Low_complexity Low_complexity 1 38 0 2 712 28 29 0 0 chr17 16711050 16711085 -78561566 + AT_rich Low_complexity Low_complexity 1 35 0 2 712 26 74 0 0 chr17 16711839 16711893 -78560758 + AT_rich Low_complexity Low_complexity 1 54 0 2 712 277 274 24 89 chr17 16713505 16713629 -78559022 - RMER12 LTR ERVK -465 857 742 2 712 25 51 0 0 chr17 16713660 16713699 -78558952 + AT_rich Low_complexity Low_complexity 1 39 0 2 712 432 327 9 0 chr17 16714632 16714739 -78557912 + PB1 SINE Alu 2 109 -18 2 712 477 219 0 0 chr17 16714911 16714993 -78557658 + MTC LTR MaLR 1 82 -339 2 712 2519 109 13 5 chr17 16714993 16715381 -78557270 + L1_Mus3 LINE L1 6246 6636 -2 2 712 25 65 0 0 chr17 16715387 16715433 -78557218 + AT_rich Low_complexity Low_complexity 1 46 0 2 712 214 130 36 36 chr17 16715443 16715499 -78557152 + A-rich Low_complexity Low_complexity 4 59 0 2 712 3479 60 7 2 chr17 16715520 16715987 -78556664 - L1Md_F3 LINE L1 -666 5916 5447 2 712 5611 44 0 1 chr17 16715987 16716675 -78555976 + L1Md_F3 LINE L1 5898 6584 0 2 712 421 111 7 229 chr17 16716733 16716873 -78555778 - RLTRETN_Mm LTR ERVK -213 109 1 2 712 32384 85 3 12 chr17 16716873 16722101 -78550550 + L1_Mus1 LINE L1 986 6161 -406 2 712 1883 162 26 6 chr17 16722103 16722450 -78550201 - ORR1A2-int LTR MaLR -1609 354 1 2 712 2273 99 15 6 chr17 16722450 16722774 -78549877 - ORR1A2 LTR MaLR 0 327 1 2 712 315 145 78 13 chr17 16722783 16722860 -78549791 + L1_Mur3 LINE L1 5597 5678 -202 3 712 670 275 50 86 chr17 16722858 16723220 -78549431 - L1_Mur3 LINE L1 -557 5323 4975 3 712 201 143 83 0 chr17 16723633 16723717 -78548934 + (TAGA)n Simple_repeat Simple_repeat 4 94 0 3 712 1226 41 0 0 chr17 16725167 16725313 -78547338 + B1_Mm SINE Alu 2 147 0 3 712 266 284 25 0 chr17 16725376 16725457 -78547194 + L1MA6 LINE L1 6010 6092 -208 3 712 807 190 23 11 chr17 16725482 16725658 -78546993 + Lx9 LINE L1 7315 7492 -152 3 712 247 273 18 0 chr17 16725995 16726050 -78546601 - MurSatRep1 Unknown Unknown -1854 283 228 3 712 278 213 0 0 chr17 16726050 16726097 -78546554 + B1_Mur2 SINE Alu 74 120 -29 3 712 306 0 0 0 chr17 16726098 16726132 -78546519 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 712 543 31 0 0 chr17 16726132 16726196 -78546455 + (GA)n Simple_repeat Simple_repeat 2 66 0 3 712 257 0 30 0 chr17 16726495 16726528 -78546123 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 3 712 1354 99 9 14 chr17 16726531 16726747 -78545904 - L1_Mus3 LINE L1 -2 6636 6422 3 712 924 254 34 0 chr17 16726804 16727013 -78545638 + B3 SINE B2 1 216 0 3 712 417 298 150 80 chr17 16727150 16727641 -78545010 + MLT1H2-int LTR MaLR 874 1489 0 3 712 277 333 0 0 chr17 16727715 16727796 -78544855 + MLT1H2 LTR MaLR 99 179 -310 3 712 346 253 204 17 chr17 16727816 16727997 -78544654 - B3 SINE B2 0 216 2 3 712 371 229 47 39 chr17 16729170 16729297 -78543354 - L1M4 LINE L1 -6365 177 50 3 712 366 207 8 87 chr17 16729743 16729756 -78542895 + ID_B1 SINE B4 108 224 0 3 712 735 105 9 0 chr17 16729756 16729870 -78542781 + B1_Mus1 SINE Alu 34 148 0 3 712 207 0 0 0 chr17 16730067 16730090 -78542561 + (T)n Simple_repeat Simple_repeat 1 23 0 3 712 21 0 0 0 chr17 16730162 16730183 -78542468 + AT_rich Low_complexity Low_complexity 1 21 0 3 712 867 108 7 41 chr17 16730216 16730346 -78542305 + B1_Mus1 SINE Alu 9 137 -11 3 712 182 62 31 0 chr17 16730346 16730378 -78542273 + (CTAAA)n Simple_repeat Simple_repeat 3 35 0 3 712 867 108 7 41 chr17 16730378 16730392 -78542259 + B1_Mus1 SINE Alu 138 148 0 3 712 1161 61 0 0 chr17 16730600 16730747 -78541904 + B1_Mm SINE Alu 1 147 0 3 712 225 0 0 0 chr17 16731064 16731089 -78541562 + (A)n Simple_repeat Simple_repeat 1 25 0 3 712 1493 148 8 8 chr17 16731173 16731432 -78541219 + Lx2A1 LINE L1 6750 7008 0 3 712 252 431 0 16 chr17 16731841 16731966 -78540685 - MER102c DNA MER1_type 0 331 209 3 712 2067 82 0 19 chr17 16732562 16732874 -78539777 - L1_Mur1 LINE L1 -501 5385 5080 3 712 5754 89 54 19 chr17 16732871 16733974 -78538677 + L1_Mus2 LINE L1 5416 6565 -1 3 712 7462 82 98 3 chr17 16734001 16735102 -78537549 + Lx3_Mus LINE L1 5799 7004 -5 3 712 339 150 0 0 chr17 16736384 16736444 -78536207 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 712 516 32 0 0 chr17 16737043 16737105 -78535546 + (GA)n Simple_repeat Simple_repeat 1 62 0 3 712 720 64 0 0 chr17 16737401 16737495 -78535156 + (TA)n Simple_repeat Simple_repeat 2 95 0 3 712 637 294 81 76 chr17 16737546 16737981 -78534670 + Charlie1 DNA MER1_type 2328 2764 -17 3 712 620 279 31 88 chr17 16738087 16738405 -78534246 + L1MC3 LINE L1 6709 7008 -777 3 712 223 301 204 29 chr17 16738423 16738560 -78534091 + RSINE1 SINE B4 5 165 0 3 712 277 294 92 0 chr17 16738840 16738959 -78533692 + L1MC3 LINE L1 7292 7421 -364 3 712 288 0 0 0 chr17 16739149 16739181 -78533470 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 712 241 196 185 56 chr17 16739182 16739290 -78533361 + Lx9 LINE L1 7516 7637 -7 3 712 292 260 244 17 chr17 16739319 16739499 -78533152 + L1MC3 LINE L1 7477 7697 -88 3 712 3316 28 10 0 chr17 16739640 16740031 -78532620 - MTA_Mm LTR MaLR 0 396 2 3 712 397 143 0 0 chr17 16741365 16741428 -78531223 + MYSERV6-int LTR ERVK 6645 6707 -2252 3 712 612 227 0 77 chr17 16742021 16742164 -78530487 + B1_Mur3 SINE Alu 18 149 0 3 712 952 264 105 40 chr17 16742295 16742707 -78529944 + MYSERV16_I-int LTR ERVK 4208 4522 -2028 3 712 6000 92 17 34 chr17 16742709 16744084 -78528567 + L1VL4 LINE L1 400 1771 -1788 3 712 4440 245 74 64 chr17 16744088 16745032 -78527619 + MYSERV16_I-int LTR ERVK 381 1379 -947 3 712 1130 88 7 0 chr17 16745032 16745179 -78527472 + B1_Mus1 SINE Alu 1 148 0 3 712 4440 245 74 64 chr17 16745179 16745197 -78527454 + MYSERV16_I-int LTR ERVK 1380 1380 -946 3 712 552 68 0 0 chr17 16745197 16745270 -78527381 + (GGGAA)n Simple_repeat Simple_repeat 3 75 0 3 712 1313 67 0 11 chr17 16745271 16745453 -78527198 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 3 712 549 0 0 0 chr17 16745455 16745516 -78527135 + (GAAAA)n Simple_repeat Simple_repeat 3 63 0 3 712 4440 245 74 64 chr17 16745516 16745802 -78526849 + MYSERV16_I-int LTR ERVK 1380 1640 -686 3 712 180 0 0 0 chr17 16745802 16745822 -78526829 + (ATG)n Simple_repeat Simple_repeat 3 22 0 3 712 4440 245 74 64 chr17 16745822 16746277 -78526374 + MYSERV16_I-int LTR ERVK 1641 2107 -219 3 712 294 190 60 0 chr17 16746268 16746355 -78526296 + MYSERV6-int LTR ERVK 2200 2251 -75 3 712 1884 158 20 14 chr17 16746414 16746768 -78525883 + RLTR15 LTR ERVK 4 359 0 3 712 767 308 129 5 chr17 16747141 16747559 -78525092 + Lx9 LINE L1 6949 7418 -226 3 712 345 75 0 0 chr17 16747562 16747615 -78525036 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 712 878 306 110 19 chr17 16748193 16748884 -78523767 - L1MA4 LINE L1 -293 6010 5257 3 712 32 0 0 0 chr17 16749065 16749097 -78523554 + AT_rich Low_complexity Low_complexity 1 32 0 3 712 476 133 0 0 chr17 16751225 16751298 -78521353 + MTC LTR MaLR 1 73 -348 3 712 381 259 79 33 chr17 16751298 16751394 -78521257 - RLTR16 LTR ERVK 0 505 405 3 712 432 0 0 0 chr17 16751394 16751442 -78521209 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 712 1530 182 10 7 chr17 16751442 16751744 -78520907 - RLTR16 LTR ERVK -101 404 1 3 712 302 211 0 0 chr17 16751744 16751801 -78520850 + MTC LTR MaLR 68 124 -297 3 712 2389 235 80 30 chr17 16751802 16752185 -78520466 + Lx7 LINE L1 6994 7416 -280 3 712 441 0 0 0 chr17 16752185 16752234 -78520417 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 712 2389 235 80 30 chr17 16752234 16752516 -78520135 + Lx7 LINE L1 7417 7691 -5 3 712 1246 211 89 19 chr17 16752526 16752723 -78519928 + MTC LTR MaLR 131 336 -85 3 712 405 0 0 0 chr17 16752723 16752768 -78519883 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 712 1246 211 89 19 chr17 16752768 16752841 -78519810 + MTC LTR MaLR 337 419 -2 3 712 3174 202 162 62 chr17 16752844 16753537 -78519114 + MTC-int LTR MaLR 347 1366 -426 3 712 4213 78 0 11 chr17 16753537 16754108 -78518543 + L1Md_F2 LINE L1 6018 6582 0 3 712 3174 196 152 60 chr17 16754108 16754341 -78518310 + MTC-int LTR MaLR 1059 1258 0 3 712 252 0 0 0 chr17 16754678 16754706 -78517945 + (A)n Simple_repeat Simple_repeat 1 28 0 3 712 507 133 0 0 chr17 16754908 16755013 -78517638 + (TCTCTG)n Simple_repeat Simple_repeat 2 106 0 3 712 21 71 0 0 chr17 16755264 16755306 -78517345 + AT_rich Low_complexity Low_complexity 1 42 0 3 712 21 0 0 0 chr17 16755516 16755537 -78517114 + AT_rich Low_complexity Low_complexity 1 21 0 3 712 4126 124 61 5 chr17 16755555 16756211 -78516440 + Lx3B LINE L1 6277 6969 -4 3 712 24 0 0 0 chr17 16756220 16756244 -78516407 + AT_rich Low_complexity Low_complexity 1 24 0 3 712 338 300 66 8 chr17 16757864 16757985 -78514666 + L2a LINE L2 3293 3420 -6 3 712 1938 142 24 59 chr17 16757997 16758335 -78514316 + ORR1A3 LTR MaLR 1 326 0 3 712 389 238 37 19 chr17 16758596 16758703 -78513948 + RMER15 LTR ERVL 453 561 -14 3 712 246 276 50 93 chr17 16759704 16759844 -78512807 - ORR1A1-int LTR MaLR -184 1608 1475 3 712 297 0 0 0 chr17 16760457 16760490 -78512161 + (TA)n Simple_repeat Simple_repeat 1 33 0 3 712 306 348 73 37 chr17 16761279 16761443 -78511208 + Lx8 LINE L1 7033 7202 -271 3 712 751 138 31 0 chr17 16761585 16761715 -78510936 + RMER17C LTR ERVK 1 134 -276 3 712 2290 19 86 0 chr17 16761715 16761984 -78510667 + RLTR10B LTR ERVK 1 292 0 3 712 1481 50 0 0 chr17 16761984 16762164 -78510487 + MMERVK10C-int LTR ERVK 1 180 -7401 3 712 253 200 0 0 chr17 16762164 16762209 -78510442 + RLTR27 LTR ERVK 231 275 -34 3 712 336 43 106 0 chr17 16762209 16762256 -78510395 + MMERVK10C-int LTR ERVK 225 276 -7305 3 712 1018 47 23 0 chr17 16762242 16762370 -78510281 + MMERVK10C-int LTR ERVK 5436 5566 -2015 3 712 1863 77 0 0 chr17 16762370 16762605 -78510046 + MMERVK10C-int LTR ERVK 7347 7581 0 3 712 2278 22 86 0 chr17 16762605 16762874 -78509777 + RLTR10B LTR ERVK 1 292 0 3 712 1286 173 37 34 chr17 16762874 16763198 -78509453 + RMER17C LTR ERVK 86 410 0 3 712 355 263 98 44 chr17 16763336 16763539 -78509112 + L1_Mur3 LINE L1 5177 5390 -490 3 712 3368 203 116 8 chr17 16763533 16764426 -78508225 + Lx9 LINE L1 6645 7633 -11 3 712 514 358 13 17 chr17 16764610 16764843 -78507808 - Lx8 LINE L1 -327 7146 6915 3 712 870 318 41 50 chr17 16764848 16765316 -78507335 + Lx8 LINE L1 5413 5922 -1722 3 712 6579 98 88 2 chr17 16765305 16766317 -78506334 - Lx LINE L1 -5 6649 5523 3 712 545 142 21 1 chr17 16766302 16766423 -78506228 - L1_Mur2 LINE L1 -557 5323 5200 3 712 1081 290 28 12 chr17 16766736 16767061 -78505590 + Lx8 LINE L1 6305 6634 -839 3 712 7670 89 29 10 chr17 16767142 16768253 -78504398 - Lx3_Mus LINE L1 -13 6996 5865 3 712 416 325 74 93 chr17 16768641 16768695 -78503956 - MLT2B4 LTR ERVL -39 375 317 3 712 3974 126 106 25 chr17 16768695 16769377 -78503274 - RMER19A LTR ERVK 0 737 1 3 712 680 293 107 53 chr17 16769377 16769699 -78502952 - MLT2B4 LTR ERVL -98 316 6 3 712 377 288 0 12 chr17 16769700 16769781 -78502870 + RSINE1 SINE B4 2 81 -84 3 712 206 122 61 0 chr17 16769781 16769830 -78502821 + (CAAA)n Simple_repeat Simple_repeat 3 54 0 3 712 311 89 18 0 chr17 16769937 16769993 -78502658 + (CAAAA)n Simple_repeat Simple_repeat 4 60 0 3 712 327 49 0 0 chr17 16770094 16770135 -78502516 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 712 621 0 0 0 chr17 16770135 16770203 -78502448 + (GA)n Simple_repeat Simple_repeat 2 70 0 3 712 1636 186 14 61 chr17 16771199 16771628 -78501023 - Lx9 LINE L1 0 7644 7236 3 712 347 258 21 21 chr17 16772927 16773022 -78499629 + MER20 DNA MER1_type 92 186 -33 3 712 405 317 0 0 chr17 16773323 16773424 -78499227 - RSINE1 SINE B4 -30 135 35 3 712 505 279 9 9 chr17 16773451 16773563 -78499088 - B1F2 SINE Alu -7 142 31 3 712 1419 161 201 24 chr17 16774539 16774729 -78497922 - RMER10B LTR ERVL 0 398 156 3 712 195 42 0 0 chr17 16774729 16774753 -78497898 + (GGGAGA)n Simple_repeat Simple_repeat 1 24 0 3 712 1419 161 201 24 chr17 16774753 16774900 -78497751 - RMER10B LTR ERVL -243 155 2 3 712 4465 31 6 7 chr17 16774979 16775523 -78497128 - L1Md_F3 LINE L1 -12 6572 6030 3 712 320 253 0 25 chr17 16775640 16775721 -78496930 + Lx8 LINE L1 6313 6391 -1082 3 712 476 240 0 0 chr17 16775727 16775831 -78496820 + Lx7 LINE L1 7159 7262 -434 3 712 434 228 0 29 chr17 16775950 16776054 -78496597 + Lx7 LINE L1 7261 7361 -335 3 712 284 182 260 0 chr17 16776065 16776142 -78496509 - B1_Mur2 SINE Alu 0 149 53 3 712 337 301 50 48 chr17 16776874 16777200 -78495451 - RLTR15 LTR ERVK -9 350 1 3 713 674 258 140 12 chr17 16778256 16778499 -78494152 - Lx9 LINE L1 -398 7246 6973 4 713 602 257 35 7 chr17 16778931 16779076 -78493575 + B1_Mur2 SINE Alu 1 149 0 4 713 3217 145 108 85 chr17 16779550 16780288 -78492363 - RMER6A LTR ERVK 0 756 2 4 713 434 168 125 59 chr17 16780547 16780699 -78491952 + Lx9 LINE L1 7482 7643 -1 4 713 301 247 49 85 chr17 16782289 16782453 -78490198 + L1MC1 LINE L1 5424 5581 -752 4 713 1137 252 83 30 chr17 16782461 16782800 -78489851 + ORR1D2 LTR MaLR 14 370 0 4 713 1057 319 74 33 chr17 16782815 16783488 -78489163 + L1MC1 LINE L1 5625 6325 -8 4 713 3197 174 14 32 chr17 16784511 16785099 -78487552 + RLTR20B3 LTR ERVK 1 577 0 4 713 340 230 64 107 chr17 16785401 16785635 -78487016 - Lx7 LINE L1 -4 7692 7469 4 713 19699 103 4 5 chr17 16785706 16789361 -78483290 + L1_Mus1 LINE L1 2916 6567 0 4 713 263 331 89 39 chr17 16789863 16790042 -78482609 - Lx8 LINE L1 -21 7452 7265 4 713 4219 167 72 78 chr17 16790042 16790950 -78481701 - RMER19B LTR ERVK 0 902 1 4 713 469 302 8 0 chr17 16790951 16791080 -78481571 - Lx8 LINE L1 -204 7269 7140 4 713 26 50 0 0 chr17 16791231 16791271 -78481380 + AT_rich Low_complexity Low_complexity 1 40 0 4 713 244 241 0 0 chr17 16792389 16792447 -78480204 + T-rich Low_complexity Low_complexity 1 58 0 4 713 1629 235 37 12 chr17 16792466 16792875 -78479776 - MTD LTR MaLR 0 419 1 4 713 456 298 159 33 chr17 16792882 16793246 -78479405 - Lx8 LINE L1 -51 7422 7013 4 713 429 20 0 0 chr17 16793246 16793296 -78479355 + (TTTTC)n Simple_repeat Simple_repeat 3 52 0 4 713 951 164 14 6 chr17 16793300 16793492 -78479159 - Lx2 LINE L1 -65 6932 6765 4 713 990 139 53 16 chr17 16793501 16793728 -78478923 + L1_Mur1 LINE L1 2329 2596 -3290 4 713 1059 147 136 0 chr17 16793750 16793948 -78478703 - Lx2 LINE L1 -8 6989 6765 4 713 5429 123 11 27 chr17 16793937 16794798 -78477853 - Lx2 LINE L1 -352 6645 5799 4 713 551 354 77 10 chr17 16794827 16795127 -78477524 - Lx8 LINE L1 -453 7020 6701 4 713 270 0 0 0 chr17 16795512 16795542 -78477109 + (TA)n Simple_repeat Simple_repeat 1 30 0 4 713 24 0 0 0 chr17 16795803 16795827 -78476824 + AT_rich Low_complexity Low_complexity 1 24 0 4 713 219 167 0 0 chr17 16795988 16796030 -78476621 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 713 216 0 0 0 chr17 16796284 16796308 -78476343 + (A)n Simple_repeat Simple_repeat 1 24 0 4 713 21 36 0 0 chr17 16797482 16797510 -78475141 + AT_rich Low_complexity Low_complexity 1 28 0 4 713 1104 161 5 5 chr17 16797522 16797715 -78474936 - Lx4A LINE L1 -3 7055 6863 4 713 364 314 21 84 chr17 16797735 16797925 -78474726 + MIRb SINE MIR 25 194 -68 4 713 205 293 37 74 chr17 16797927 16798008 -78474643 - MIR SINE MIR -88 174 97 4 713 450 296 25 38 chr17 16798537 16798695 -78473956 + B3 SINE B2 48 203 -13 4 713 207 0 0 0 chr17 16800552 16800575 -78472076 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 713 1962 311 45 7 chr17 16800947 16801633 -78471018 + Lx5 LINE L1 5927 6638 -412 4 713 249 250 73 0 chr17 16802080 16802148 -78470503 + ID4 SINE ID 2 74 -9 4 713 260 27 0 26 chr17 16802817 16802855 -78469796 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 4 713 246 136 0 0 chr17 16804107 16804151 -78468500 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 713 231 296 17 77 chr17 16805603 16805720 -78466931 + Charlie26a DNA MER1_type 62 171 -154 4 713 1005 40 0 0 chr17 16807144 16807269 -78465382 - ORR1A1 LTR MaLR -81 265 141 4 713 37951 30 0 0 chr17 16807294 16813735 -78458916 - L1Md_T LINE L1 0 6585 48 4 713 782 256 31 42 chr17 16813779 16813971 -78458680 + B3 SINE B2 2 191 -25 4 713 26 50 0 0 chr17 16814389 16814429 -78458222 + AT_rich Low_complexity Low_complexity 1 40 0 4 713 221 0 35 0 chr17 16815392 16815421 -78457230 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 4 713 1683 88 71 0 chr17 16816423 16816713 -78455938 - L1_Mus3 LINE L1 -45 5838 5499 4 713 5366 86 5 13 chr17 16816713 16817477 -78455174 + L1_Mus3 LINE L1 5881 6638 0 4 713 16780 132 31 28 chr17 16817480 16820813 -78451838 + Lx3C LINE L1 2881 6217 -759 4 713 4857 82 0 3 chr17 16820831 16821484 -78451167 - L1_Mus1 LINE L1 -1 6566 5916 4 713 4161 138 19 4 chr17 16821479 16822169 -78450482 + Lx3C LINE L1 6275 6974 -2 4 713 33 0 0 0 chr17 16822797 16822830 -78449821 + AT_rich Low_complexity Low_complexity 1 33 0 4 713 210 150 0 0 chr17 16823415 16823455 -78449196 + (TTGG)n Simple_repeat Simple_repeat 4 43 0 4 713 942 168 178 5 chr17 16825616 16825807 -78446844 + URR1B DNA MER1_type 1 224 -1 4 713 288 0 0 0 chr17 16826157 16826189 -78446462 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 4 713 308 21 21 0 chr17 16826201 16826249 -78446402 + L1Md_T LINE L1 6534 6582 0 4 713 270 0 0 0 chr17 16826250 16826280 -78446371 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 4 713 951 116 27 7 chr17 16826281 16826429 -78446222 - B2_Mm2 SINE B2 -43 152 2 4 713 357 24 0 0 chr17 16826444 16826486 -78446165 + (TTA)n Simple_repeat Simple_repeat 1 42 0 4 713 225 0 0 0 chr17 16826486 16826511 -78446140 + (TAG)n Simple_repeat Simple_repeat 3 27 0 4 713 2028 57 0 15 chr17 16826511 16826780 -78445871 - L1Md_F2 LINE L1 -18 6564 6300 4 713 255 31 0 0 chr17 16827539 16827571 -78445080 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 4 713 784 191 0 68 chr17 16827572 16827718 -78444933 - B1_Mus1 SINE Alu -12 136 1 4 713 374 296 94 22 chr17 16828798 16828936 -78443715 - MLT1A0 LTR MaLR -217 148 1 4 713 22 0 0 0 chr17 16829048 16829070 -78443581 + AT_rich Low_complexity Low_complexity 1 22 0 4 713 1142 67 13 1 chr17 16829232 16829385 -78443266 + B2_Mm2 SINE B2 2 154 -41 4 713 504 0 0 0 chr17 16829385 16829441 -78443210 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 713 944 146 16 60 chr17 16829441 16829469 -78443182 + B2_Mm1t SINE B2 154 175 -18 4 713 334 282 11 45 chr17 16830215 16830304 -78442347 - B4A SINE B4 -151 141 56 4 713 849 215 73 16 chr17 16831206 16831413 -78441238 + B3 SINE B2 15 215 -1 4 713 361 318 38 38 chr17 16831546 16831703 -78440948 - MER58B DNA MER1_type -19 322 166 4 713 254 362 42 11 chr17 16831840 16831935 -78440716 - MIRm SINE MIR -22 254 157 4 713 2623 282 89 50 chr17 16832871 16834002 -78438649 + Lx9 LINE L1 6462 7636 -8 4 713 429 70 0 0 chr17 16834681 16834738 -78437913 + (CA)n Simple_repeat Simple_repeat 1 57 0 4 713 1110 241 258 19 chr17 16834867 16835114 -78437537 - Lx6 LINE L1 -26 7434 7186 4 713 372 77 0 0 chr17 16835114 16835166 -78437485 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 713 1110 241 258 19 chr17 16835166 16835434 -78437217 - Lx6 LINE L1 -275 7185 6797 4 713 224 30 0 29 chr17 16836549 16836583 -78436068 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 4 713 1560 94 0 26 chr17 16836710 16836939 -78435712 - Lx2 LINE L1 0 6997 6775 4 713 283 65 0 0 chr17 16836939 16836985 -78435666 - Lx2 LINE L1 -354 6643 6598 4 713 1464 92 0 0 chr17 16836982 16837199 -78435452 + L1_Mus4 LINE L1 5620 5836 -800 4 713 1022 103 42 140 chr17 16837202 16837352 -78435299 + B2_Mm2 SINE B2 3 161 -34 4 713 306 0 0 0 chr17 16837352 16837386 -78435265 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 4 713 1022 103 42 140 chr17 16837386 16837413 -78435238 + B2_Mm2 SINE B2 162 162 -33 4 713 5138 63 0 5 chr17 16837413 16838065 -78434586 + L1Md_T LINE L1 5934 6582 0 4 713 1022 103 42 140 chr17 16838065 16838100 -78434551 + B2_Mm2 SINE B2 162 195 0 4 713 3084 138 49 3 chr17 16838100 16838675 -78433976 + Lx2 LINE L1 5828 6428 -569 4 713 258 342 39 55 chr17 16838753 16838880 -78433771 - ORR1E LTR MaLR -168 191 67 4 713 388 328 37 13 chr17 16839201 16839347 -78433304 + B1F1 SINE Alu 5 147 0 4 713 543 256 93 0 chr17 16839502 16839631 -78433020 - B1_Mur2 SINE Alu -7 142 2 4 713 475 397 49 10 chr17 16839689 16840078 -78432573 + Kanga1a DNA Tc2 35 438 -316 4 713 216 0 0 0 chr17 16840078 16840102 -78432549 + (A)n Simple_repeat Simple_repeat 1 24 0 4 713 338 307 74 26 chr17 16840250 16840481 -78432170 + Kanga1a DNA Tc2 513 754 0 4 713 583 263 53 0 chr17 16841655 16841788 -78430863 + B1F SINE Alu 10 149 0 4 713 360 0 0 0 chr17 16841838 16841878 -78430773 + (TC)n Simple_repeat Simple_repeat 1 40 0 4 713 260 253 157 0 chr17 16842774 16842857 -78429794 + MER63B DNA AcHobo 334 429 -7 4 713 201 260 211 39 chr17 16842875 16843055 -78429596 - MIR SINE MIR -39 223 13 4 713 1893 147 11 34 chr17 16843705 16843805 -78428846 - Lx5 LINE L1 -1114 5936 5848 4 713 3374 38 2 0 chr17 16843805 16844200 -78428451 + MTA_Mm LTR MaLR 1 396 0 4 713 1893 147 11 34 chr17 16844200 16844457 -78428194 - Lx5 LINE L1 -1203 5847 5587 4 713 551 240 241 25 chr17 16844475 16844753 -78427898 - RLTR9A LTR ERVK -30 338 1 4 713 708 186 5 21 chr17 16844753 16844945 -78427706 - L1_Mur1 LINE L1 -460 5426 5238 4 713 23 0 0 0 chr17 16844945 16844968 -78427683 + AT_rich Low_complexity Low_complexity 1 23 0 4 713 1705 133 0 48 chr17 16844979 16845271 -78427380 - Lx3B LINE L1 -3 6970 6693 4 713 2373 119 5 79 chr17 16845271 16845724 -78426927 - Lx3B LINE L1 -608 6365 5945 4 713 1442 231 45 32 chr17 16845811 16846186 -78426465 + Lx5 LINE L1 6670 7049 -1 4 713 21 0 0 0 chr17 16846730 16846751 -78425900 + AT_rich Low_complexity Low_complexity 1 21 0 4 713 453 145 12 12 chr17 16847369 16847453 -78425198 - ORR1C2 LTR MaLR 0 384 301 4 713 284 352 47 31 chr17 16847498 16847627 -78425024 + MLT1H2 LTR MaLR 1 131 -358 4 713 646 287 188 28 chr17 16847724 16848011 -78424640 + MT2A LTR ERVL 196 528 -5 4 713 245 291 33 26 chr17 16848071 16848223 -78424428 - L1MEc LINE L1 -4224 2176 2024 4 713 14528 189 40 69 chr17 16849109 16849698 -78422953 + Lx2B LINE L1 834 1403 -4474 4 713 3128 28 0 3 chr17 16849698 16850056 -78422595 - IAPEY2_LTR LTR ERVK 0 357 1 4 713 14528 174 99 124 chr17 16850056 16852023 -78420628 + Lx2B LINE L1 1404 3366 -2511 4 713 5888 69 0 9 chr17 16852023 16852796 -78419855 - L1Md_F2 LINE L1 -3 6579 5814 4 713 14528 160 72 81 chr17 16852796 16856514 -78416137 + Lx2B LINE L1 3367 7000 0 4 713 2491 77 12 3 chr17 16856752 16857089 -78415562 - MTA_Mm LTR MaLR 0 396 57 4 713 498 326 21 0 chr17 16857354 16857495 -78415156 + RSINE1 SINE B4 3 146 -19 4 713 6318 186 54 18 chr17 16857830 16859165 -78413486 - Lx5 LINE L1 -72 6978 5596 5 713 4094 148 50 2 chr17 16859164 16860009 -78412642 - L1_Mur1 LINE L1 -1785 4101 3217 5 713 2082 107 21 17 chr17 16860023 16860398 -78412253 + RLTR10A LTR ERVK 1 386 -4 5 713 1158 29 0 0 chr17 16860402 16860540 -78412111 + (TTTC)n Simple_repeat Simple_repeat 1 138 0 5 713 807 144 165 5 chr17 16860545 16860733 -78411918 - MusHAL1 LINE L1 -1053 1659 1442 5 713 8800 172 168 10 chr17 16860740 16861470 -78411181 + L1_Mur2 LINE L1 2686 3419 -2458 5 713 3491 18 2 0 chr17 16861470 16861865 -78410786 - MTA_Mm LTR MaLR 0 396 1 5 713 8800 172 168 10 chr17 16861865 16863389 -78409262 + L1_Mur2 LINE L1 3420 5297 -580 5 713 3939 55 29 2 chr17 16864539 16865029 -78407622 - RLTR1C LTR ERV1 0 503 1 5 713 2815 165 57 9 chr17 16865142 16865570 -78407081 + Lx LINE L1 5307 5734 -149 5 713 3093 56 13 8 chr17 16865570 16865964 -78406687 + MTA_Mm LTR MaLR 1 396 0 5 713 5363 128 121 6 chr17 16865964 16866949 -78405702 + MTA_Mm-int LTR MaLR 1 1098 0 5 713 3088 66 2 8 chr17 16866949 16867347 -78405304 + MTA_Mm LTR MaLR 1 396 0 5 713 2815 94 75 12 chr17 16867347 16867595 -78405056 + Lx LINE L1 5735 6009 -645 5 713 787 146 0 0 chr17 16867593 16867723 -78404928 - Lx LINE L1 -385 6269 6140 5 713 2178 98 11 37 chr17 16867726 16868106 -78404545 + Lx LINE L1 6283 6652 -2 5 713 4186 128 8 8 chr17 16868115 16868771 -78403880 + Lx LINE L1 5999 6654 0 5 713 7261 161 17 10 chr17 16868774 16870625 -78402026 - L1VL4 LINE L1 -3227 2659 797 5 713 306 0 0 0 chr17 16871929 16871963 -78400688 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 713 1446 134 0 9 chr17 16872586 16872811 -78399840 - Lx2 LINE L1 0 6997 6775 5 713 645 105 114 0 chr17 16872811 16872916 -78399735 - Lx2 LINE L1 -354 6643 6527 5 713 1027 268 113 12 chr17 16873520 16873856 -78398795 + MTD LTR MaLR 48 417 -2 5 713 391 250 115 15 chr17 16873857 16873987 -78398664 + MTD-int LTR MaLR 10 152 -1106 5 713 2285 226 98 64 chr17 16873991 16874352 -78398299 + RMER17B LTR ERVK 12 485 -421 5 713 513 0 0 0 chr17 16874352 16874409 -78398242 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 713 2285 217 86 57 chr17 16874409 16874877 -78397774 + RMER17B LTR ERVK 436 892 -14 5 713 526 257 50 7 chr17 16874997 16875138 -78397513 + MTD-int LTR MaLR 302 448 -810 5 713 734 331 56 21 chr17 16875132 16875419 -78397232 + MTD-int LTR MaLR 691 987 -271 5 713 581 305 28 28 chr17 16875401 16875583 -78397068 + MT2A LTR ERVL 192 373 -160 5 713 502 342 110 10 chr17 16875921 16876222 -78396429 - MLT1A0 LTR MaLR 0 365 35 5 713 25 31 0 0 chr17 16876392 16876424 -78396227 + AT_rich Low_complexity Low_complexity 1 32 0 5 713 1297 278 49 7 chr17 16876555 16877001 -78395650 + Lx7 LINE L1 6943 7407 -289 5 713 231 331 67 93 chr17 16877379 16877679 -78394972 - ORR1D1 LTR MaLR -8 366 75 5 713 318 387 38 19 chr17 16877685 16877843 -78394808 - MLT1A1 LTR MaLR -244 164 4 5 713 351 146 49 0 chr17 16878145 16878227 -78394424 + (CATA)n Simple_repeat Simple_repeat 3 88 0 5 713 446 0 0 18 chr17 16878229 16878284 -78394367 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 713 266 161 21 21 chr17 16878397 16878492 -78394159 + (TG)n Simple_repeat Simple_repeat 2 96 0 5 713 1615 204 181 12 chr17 16878509 16878930 -78393721 + MT2A LTR ERVL 1 492 -41 5 713 35336 28 2 7 chr17 16879126 16884325 -78388326 + L1Md_A LINE L1 422 5586 -297 5 713 8396 34 0 0 chr17 16884325 16885321 -78387330 + L1Md_A LINE L1 5587 6582 0 5 713 31 58 0 0 chr17 16885321 16885373 -78387278 + AT_rich Low_complexity Low_complexity 1 52 0 5 713 220 329 177 18 chr17 16886382 16886546 -78386105 + MIR SINE MIR 72 261 -1 5 713 611 220 123 4 chr17 16887470 16887698 -78384953 + Lx9 LINE L1 7383 7637 -7 5 713 513 0 0 0 chr17 16887873 16887930 -78384721 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 713 1203 57 0 0 chr17 16887941 16888098 -78384553 - L1Md_F3 LINE L1 -15 6569 6413 5 713 184 316 66 0 chr17 16888892 16888968 -78383683 + L2c LINE L2 3248 3328 -59 5 713 273 163 0 0 chr17 16889525 16889574 -78383077 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 713 186 364 50 25 chr17 16889747 16889868 -78382783 - MIRb SINE MIR -114 154 31 5 713 284 279 260 0 chr17 16891127 16891231 -78381420 + B1F2 SINE Alu 14 144 -5 5 713 370 124 22 0 chr17 16891369 16891458 -78381193 + (TG)n Simple_repeat Simple_repeat 2 92 0 5 713 26224 96 57 1 chr17 16891483 16896386 -78376265 - L1_Mus1 LINE L1 0 6567 1373 5 713 2624 67 93 3 chr17 16896386 16896763 -78375888 + IAPLTR2a LTR ERVK 1 411 0 5 713 343 111 0 0 chr17 16896765 16896819 -78375832 + IAPEz-int LTR ERVK 3 56 -1931 5 713 418 151 0 152 chr17 16896833 16896958 -78375693 + IAPEz-int LTR ERVK 18 123 -6358 5 713 229 267 0 0 chr17 16896958 16897003 -78375648 + RLTR27 LTR ERVK 231 275 -34 5 713 650 107 29 10 chr17 16897003 16897107 -78375544 + IAPEz-int LTR ERVK 145 250 -7331 5 713 240 327 0 0 chr17 16897107 16897162 -78375489 + RLTR27 LTR ERVK 221 275 -34 5 713 3277 56 22 16 chr17 16897162 16897728 -78374923 + IAPEz-int LTR ERVK 168 662 -5819 5 713 2141 61 0 0 chr17 16897728 16898006 -78374645 + IAPEz-int LTR ERVK 1359 1636 -4845 5 713 5821 36 5 12 chr17 16898005 16898754 -78373897 + IAPEz-int LTR ERVK 5736 6479 -2 5 713 2600 72 93 3 chr17 16898756 16899133 -78373518 + IAPLTR2a LTR ERVK 1 411 0 5 713 2227 190 26 88 chr17 16899133 16900323 -78372328 - L1Md_F LINE L1 -2536 1281 163 5 713 266 295 101 40 chr17 16900350 16900449 -78372202 - PB1D10 SINE Alu 0 117 13 5 713 29 28 0 0 chr17 16900932 16900968 -78371683 + AT_rich Low_complexity Low_complexity 1 36 0 5 713 228 231 28 84 chr17 16901408 16901479 -78371172 - ORR1B1-int LTR MaLR -966 543 477 5 713 1255 247 58 14 chr17 16901729 16902094 -78370557 + MTD LTR MaLR 1 419 0 5 713 849 287 140 36 chr17 16902112 16902477 -78370174 - MTD LTR MaLR -16 403 1 5 713 2407 223 107 91 chr17 16904833 16905700 -78366951 + RMER17B LTR ERVK 1 881 -77 5 713 7669 102 4 12 chr17 16907106 16907587 -78365064 - Lx2 LINE L1 -251 6746 6273 5 713 3507 76 19 6 chr17 16907587 16908063 -78364588 + RLTR45 LTR ERVK 1 482 0 5 89 7669 108 4 11 chr17 16908063 16908815 -78363836 - Lx2 LINE L1 -725 6272 5522 5 714 360 43 0 0 chr17 16908967 16909013 -78363638 + (GA)n Simple_repeat Simple_repeat 2 47 0 5 714 581 254 163 0 chr17 16909451 16909660 -78362991 - MLT1B LTR MaLR 0 390 148 5 714 1397 222 65 12 chr17 16909947 16910288 -78362363 - ORR1D2 LTR MaLR -7 363 5 5 714 809 268 53 44 chr17 16910483 16910823 -78361828 - RLTR15 LTR ERVK -16 343 1 5 714 488 147 0 10 chr17 16910950 16911046 -78361605 - Lx2 LINE L1 0 6997 6903 5 714 24 0 0 0 chr17 16911648 16911672 -78360979 + AT_rich Low_complexity Low_complexity 1 24 0 5 714 929 153 0 12 chr17 16911672 16911844 -78360807 + CT-rich Low_complexity Low_complexity 3 172 0 5 714 2318 109 0 40 chr17 16911846 16912217 -78360434 - Lx3A LINE L1 -2 6979 6624 5 714 225 94 0 0 chr17 16912281 16912313 -78360338 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 714 192 152 0 0 chr17 16912313 16912346 -78360305 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 714 326 329 144 59 chr17 16912352 16912691 -78359960 + L1ME3 LINE L1 5685 6052 -110 5 714 540 0 0 0 chr17 16912696 16912756 -78359895 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 5 714 2451 156 14 49 chr17 16913052 16913123 -78359528 + MTC LTR MaLR 1 66 -355 5 714 4380 80 33 2 chr17 16913123 16913734 -78358917 - L1_Mus3 LINE L1 0 6638 6009 5 714 2451 156 14 49 chr17 16913734 16914094 -78358557 + MTC LTR MaLR 67 417 -4 5 714 396 0 0 0 chr17 16914225 16914269 -78358382 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 714 241 367 76 36 chr17 16914836 16915113 -78357538 + MER90 LTR ERV1 279 566 -9 5 714 810 304 118 19 chr17 16916144 16916711 -78355940 + L1MB2 LINE L1 5494 6116 -55 5 714 2803 165 32 16 chr17 16917438 16918473 -78354178 + L1VL4 LINE L1 301 1353 -2206 5 714 21058 158 18 11 chr17 16920194 16925336 -78347315 + Lx2B LINE L1 1687 6861 -139 5 714 25 31 0 0 chr17 16925349 16925381 -78347270 + AT_rich Low_complexity Low_complexity 1 32 0 5 714 213 154 26 0 chr17 16925596 16925635 -78347016 + CT-rich Low_complexity Low_complexity 1 40 0 5 714 904 91 28 0 chr17 16926571 16926714 -78345937 + (TTTC)n Simple_repeat Simple_repeat 3 149 0 5 714 992 98 59 0 chr17 16927776 16927929 -78344722 + L1_Mus2 LINE L1 6405 6566 0 5 714 803 48 0 0 chr17 16928048 16928152 -78344499 + B1_Mus2 SINE Alu 44 147 0 5 714 235 24 0 87 chr17 16928152 16928198 -78344453 + (CAAAAA)n Simple_repeat Simple_repeat 5 46 0 5 714 868 26 0 0 chr17 16928590 16928703 -78343948 + L1Md_A LINE L1 420 532 -6192 5 714 36813 6 0 0 chr17 16928695 16933427 -78339224 + L1Md_A LINE L1 854 5586 -297 5 714 9069 2 0 0 chr17 16933427 16934451 -78338200 + L1Md_A LINE L1 5587 6582 0 5 714 5676 84 24 4 chr17 16935939 16936728 -78335923 + Lx3_Mus LINE L1 6196 7000 -9 5 714 788 222 259 9 chr17 16937223 16937455 -78335196 + B4 SINE B4 3 292 0 5 714 369 0 0 0 chr17 16937902 16937943 -78334708 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 714 491 280 112 0 chr17 16937944 16938051 -78334600 - RSINE1 SINE B4 -44 121 3 5 714 1463 63 0 10 chr17 16938493 16938685 -78333966 + L1_Mus1 LINE L1 6376 6565 -2 5 714 288 318 96 52 chr17 16939153 16939382 -78333269 - MIR SINE MIR -20 242 4 5 714 22 0 0 0 chr17 16939549 16939571 -78333080 + AT_rich Low_complexity Low_complexity 1 22 0 5 714 526 228 44 0 chr17 16939595 16939709 -78332942 + B3A SINE B2 7 125 -73 5 714 444 51 0 0 chr17 16939749 16939808 -78332843 + (TG)n Simple_repeat Simple_repeat 1 59 0 5 714 220 236 0 0 chr17 16939808 16939834 -78332817 + polypurine Low_complexity Low_complexity 2 27 0 5 714 210 91 0 0 chr17 16939834 16939867 -78332784 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 714 220 236 0 0 chr17 16939867 16939895 -78332756 + polypurine Low_complexity Low_complexity 28 55 0 5 714 974 134 6 0 chr17 16941077 16941241 -78331410 + (GGAA)n Simple_repeat Simple_repeat 4 168 0 5 714 1579 177 17 3 chr17 16941831 16942132 -78330519 - Lx2B LINE L1 -1 6999 6695 5 714 5724 129 36 13 chr17 16942132 16942277 -78330374 - Lx2B LINE L1 -443 6557 6381 5 714 180 0 0 0 chr17 16942277 16942297 -78330354 + (CACCC)n Simple_repeat Simple_repeat 3 22 0 5 714 10399 154 37 13 chr17 16942297 16944869 -78327782 - Lx2B LINE L1 -620 6380 3762 5 714 434 317 33 0 chr17 16945382 16945502 -78327149 + ID_B1 SINE B4 3 126 -98 5 714 324 0 0 0 chr17 16948342 16948378 -78324273 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 714 22 0 0 0 chr17 16948851 16948873 -78323778 + AT_rich Low_complexity Low_complexity 1 22 0 5 714 182 37 0 36 chr17 16950725 16950753 -78321898 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 714 248 352 45 62 chr17 16950793 16950905 -78321746 - MLT1E2 LTR MaLR -66 561 452 5 714 1864 181 130 29 chr17 16950971 16951059 -78321592 - RLTR20C LTR ERVK 0 534 433 5 714 324 0 0 0 chr17 16951059 16951095 -78321556 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 714 1864 181 130 29 chr17 16951095 16951489 -78321162 - RLTR20C LTR ERVK -102 432 3 5 714 200 184 0 39 chr17 16951688 16951739 -78320912 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 714 456 217 16 0 chr17 16951837 16951966 -78320685 - Lx9 LINE L1 -1 7643 7513 6 714 270 0 0 0 chr17 16952587 16952617 -78320034 + (TA)n Simple_repeat Simple_repeat 1 30 0 6 714 1173 69 0 0 chr17 16952630 16952775 -78319876 - B1_Mus1 SINE Alu -2 146 2 6 714 23 68 0 0 chr17 16952775 16952819 -78319832 + AT_rich Low_complexity Low_complexity 1 44 0 6 714 213 132 0 0 chr17 16953947 16953985 -78318666 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 714 203 122 0 20 chr17 16954586 16954636 -78318015 + (TTTTTA)n Simple_repeat Simple_repeat 5 53 0 6 714 1106 291 58 21 chr17 16954754 16955130 -78317521 - Lx6 LINE L1 -27 7433 7044 6 714 1474 190 0 87 chr17 16955131 16955511 -78317140 + Lx5 LINE L1 4015 4361 -1516 6 714 242 275 115 52 chr17 16955511 16955607 -78317044 + RMER21A LTR ERV1 777 878 -69 6 714 202 143 0 45 chr17 16955783 16955827 -78316824 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 6 714 263 191 238 0 chr17 16955871 16955934 -78316717 + ID4_ SINE ID 2 79 -4 6 714 869 74 0 8 chr17 16955934 16956057 -78316594 + (GGAA)n Simple_repeat Simple_repeat 3 124 0 6 714 2750 235 69 21 chr17 16956108 16956741 -78315910 + Lx5 LINE L1 5587 6258 -792 6 714 3022 56 201 2 chr17 16956741 16957168 -78315483 - RLTR1B LTR ERV1 0 512 1 6 714 2750 249 66 15 chr17 16957168 16957428 -78315223 + Lx5 LINE L1 6259 6748 -712 6 714 338 0 24 0 chr17 16957428 16957470 -78315181 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 6 714 998 282 6 6 chr17 16957470 16957642 -78315009 + Lx5 LINE L1 6749 6893 -567 6 714 1843 174 31 131 chr17 16957649 16958270 -78314381 - RMER19B LTR ERVK -78 824 1 6 714 899 283 27 37 chr17 16958590 16958884 -78313767 - B4A SINE B4 -1 291 1 6 714 2176 205 60 13 chr17 16959141 16959654 -78312997 + Lx6 LINE L1 6537 7445 -15 6 714 3610 100 0 8 chr17 16959836 16960341 -78312310 - Lx2 LINE L1 0 6997 6497 6 714 517 136 12 0 chr17 16960341 16960422 -78312229 - Lx4B LINE L1 -142 6916 6835 6 714 282 355 53 11 chr17 16960491 16960585 -78312066 - PB1 SINE Alu -25 102 5 6 714 430 357 36 0 chr17 16960812 16960952 -78311699 - RSINE1 SINE B4 -16 149 5 6 714 269 286 14 0 chr17 16960965 16961035 -78311616 - PB1D7 SINE Alu -6 114 44 6 714 706 187 21 37 chr17 16961524 16961713 -78310938 - Lx9 LINE L1 -601 7043 6858 6 714 2045 234 56 38 chr17 16961716 16962271 -78310380 + Lx9 LINE L1 6307 6871 -773 6 714 3333 49 25 20 chr17 16962852 16963291 -78309360 + L1Md_F2 LINE L1 6130 6570 -12 6 714 649 279 14 0 chr17 16963527 16963674 -78308977 + RSINE1 SINE B4 1 149 -16 6 714 303 49 0 0 chr17 16963684 16963725 -78308926 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 714 6181 94 13 9 chr17 16965120 16965454 -78307197 + L1_Mus3 LINE L1 5725 6036 -602 6 714 3080 63 10 10 chr17 16965454 16965854 -78306797 + MTB LTR MaLR 1 400 0 6 714 6181 80 8 9 chr17 16965854 16966453 -78306198 + L1_Mus3 LINE L1 6037 6633 -5 6 714 214 336 70 17 chr17 16966880 16966995 -78305656 - B1F2 SINE Alu -25 124 4 6 714 386 113 41 0 chr17 16969952 16970049 -78302602 + (CA)n Simple_repeat Simple_repeat 2 102 0 6 714 1819 272 99 9 chr17 16970893 16971638 -78301013 + Lx7 LINE L1 6885 7696 0 6 714 705 24 0 0 chr17 16971762 16971845 -78300806 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 6 714 901 147 0 0 chr17 16971845 16971974 -78300677 - B1_Mus1 SINE Alu -9 139 11 6 714 1004 296 62 118 chr17 16972314 16972717 -78299934 - MTD LTR MaLR -15 404 49 6 714 1369 80 50 0 chr17 16973386 16973586 -78299065 + ORR1A2 LTR MaLR 118 327 0 6 714 420 291 90 86 chr17 16973721 16973977 -78298674 + RMER5 LTR ERV1 1 257 -277 6 714 696 188 0 0 chr17 16974588 16974705 -78297946 - B1_Mur3 SINE Alu -32 117 1 6 714 1727 144 17 81 chr17 16975324 16975672 -78296979 + ORR1A2 LTR MaLR 1 326 -1 6 714 410 248 72 17 chr17 16975683 16975798 -78296853 - PB1D10 SINE Alu 0 127 5 6 714 315 342 179 26 chr17 16977001 16977454 -78295197 - L2c LINE L2 0 3387 2846 6 714 461 17 17 0 chr17 16977523 16977581 -78295070 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 714 1770 140 0 7 chr17 16978153 16978441 -78294210 + Lx LINE L1 6362 6647 -7 6 714 241 295 170 44 chr17 16978821 16978956 -78293695 + MIR SINE MIR 73 224 -38 6 714 232 250 39 0 chr17 16979254 16979306 -78293345 + ID SINE ID 9 62 -162 6 714 23 0 0 0 chr17 16979704 16979727 -78292924 + AT_rich Low_complexity Low_complexity 1 23 0 6 714 902 301 29 13 chr17 16980375 16980614 -78292037 - MTE2b LTR MaLR -134 245 3 6 714 3816 175 38 26 chr17 16980628 16981507 -78291144 + L1_Mur3 LINE L1 1897 2785 -3095 6 714 195 42 0 0 chr17 16982605 16982629 -78290022 + (GA)n Simple_repeat Simple_repeat 1 24 0 6 714 2016 156 143 32 chr17 16982633 16983131 -78289520 + RMER16-int LTR ERVK 267 819 -4587 6 714 610 192 25 0 chr17 16983136 16983256 -78289395 + RMER16-int LTR ERVK 938 1060 -5077 6 714 2832 162 82 48 chr17 16983271 16984178 -78288473 + ETnERV2-int LTR ERVK 2935 4297 -2947 6 714 7174 116 20 0 chr17 16985985 16987076 -78285575 + ETnERV2-int LTR ERVK 3567 4679 -2727 6 714 2010 47 0 0 chr17 16987074 16987331 -78285320 + ETnERV2-int LTR ERVK 5356 5612 -1794 6 714 2503 163 78 4 chr17 16987326 16987842 -78284809 + ETnERV3-int LTR ERVK 4835 5388 -420 6 714 1253 48 42 0 chr17 16987867 16988034 -78284617 + RLTR13D5 LTR ERVK 291 464 -559 6 714 262 259 0 0 chr17 16988094 16988175 -78284476 + RNERVK23-int LTR ERVK 6808 6888 -1329 6 714 459 266 41 12 chr17 16988303 16988474 -78284177 + ETnERV3-int LTR ERVK 6355 6530 -714 6 714 296 299 11 11 chr17 16988517 16988605 -78284046 + ETnERV3-int LTR ERVK 6494 6581 -825 6 714 272 289 0 13 chr17 16988691 16988768 -78283883 + CT-rich Low_complexity Low_complexity 3 78 0 6 714 36352 40 0 3 chr17 16988926 16995178 -78277473 - L1Md_T LINE L1 -2 6583 253 6 714 294 316 136 25 chr17 16995208 16995370 -78277281 + LTR16C LTR ERVL 308 487 -2 6 714 2250 214 40 2 chr17 16995678 16996198 -78276453 + Lx4B LINE L1 6026 6565 -493 6 714 572 359 23 5 chr17 16996333 16996554 -78276097 + MER115 DNA Tip100 468 692 -1 6 714 234 178 67 0 chr17 16996584 16996629 -78276022 + RSINE1 SINE B4 79 126 -39 6 714 895 307 5 27 chr17 16996680 16996904 -78275747 + ID_B1 SINE B4 6 224 0 6 714 360 64 0 0 chr17 16998472 16998519 -78274132 + (TC)n Simple_repeat Simple_repeat 1 47 0 6 714 393 22 0 0 chr17 16998519 16998565 -78274086 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 714 326 350 99 15 chr17 16999233 16999686 -78272965 - ERVL-E-int LTR ERVL -2577 3180 2726 6 714 302 351 13 7 chr17 17000004 17000159 -78272492 - ERVL-E-int LTR ERVL -3361 2306 2151 1 714 510 340 20 20 chr17 17000364 17000559 -78272092 - LTR52 LTR ERVL -25 396 202 2 714 271 306 42 24 chr17 17001674 17001800 -78270851 + MIR SINE MIR 29 153 -55 3 714 1953 168 66 38 chr17 17002442 17002894 -78269757 - Lx7 LINE L1 -341 7355 6891 4 714 23 54 0 0 chr17 17003561 17003598 -78269053 + AT_rich Low_complexity Low_complexity 1 37 0 5 714 24 32 0 0 chr17 17003647 17003678 -78268973 + AT_rich Low_complexity Low_complexity 1 31 0 6 714 735 309 10 55 chr17 17004555 17004846 -78267805 + B4A SINE B4 3 280 -12 7 714 34 65 0 0 chr17 17005323 17005385 -78267266 + AT_rich Low_complexity Low_complexity 1 62 0 8 714 15856 162 18 16 chr17 17006139 17007137 -78265514 + Lx2 LINE L1 2717 3688 -2198 9 714 1146 95 0 0 chr17 17007137 17007284 -78265367 - B1_Mus1 SINE Alu 0 148 2 1 714 15856 150 15 15 chr17 17007284 17009499 -78263152 + Lx2 LINE L1 3689 5931 -1066 9 714 3056 45 0 0 chr17 17009499 17009853 -78262798 + IAPEY2_LTR LTR ERVK 1 354 -3 1 714 696 167 49 37 chr17 17009853 17010015 -78262636 + IAPLTR4_I LTR ERVK 17 180 -1290 1 714 8883 125 13 20 chr17 17010014 17011483 -78261168 + IAPEY3-int LTR ERVK 524 1982 -5698 1 714 3276 74 16 0 chr17 17011460 17011905 -78260746 + IAPEY3-int LTR ERVK 2238 2689 -4991 1 714 204 368 44 0 chr17 17011920 17012034 -78260617 + L3b LINE CR1 335 453 -29 1 714 2825 109 15 31 chr17 17012034 17012690 -78259961 + IAPEY3-int LTR ERVK 6984 7581 0 1 714 2953 48 3 0 chr17 17012690 17013043 -78259608 + IAPEY2_LTR LTR ERVK 1 354 -3 1 714 5461 152 66 13 chr17 17013051 17014065 -78258586 + Lx2 LINE L1 5929 6996 -1 1 714 217 225 0 0 chr17 17014066 17014106 -78258545 + polypurine Low_complexity Low_complexity 1 40 0 1 714 222 308 15 15 chr17 17014112 17014127 -78258524 - ID4 SINE ID 0 83 21 1 714 230 250 21 0 chr17 17014127 17014175 -78258476 - ID SINE ID -154 70 22 1 714 2195 325 51 16 chr17 17014418 17015399 -78257252 - Lx8 LINE L1 -252 7221 6207 1 714 1117 67 0 0 chr17 17015677 17015812 -78256839 + B1_Mus2 SINE Alu 2 136 -11 2 714 780 91 61 34 chr17 17016300 17016448 -78256203 - RMER17B LTR ERVK -495 463 312 2 714 25 75 0 0 chr17 17016563 17016616 -78256035 + AT_rich Low_complexity Low_complexity 1 53 0 2 714 392 339 0 0 chr17 17016650 17016765 -78255886 + PB1D10 SINE Alu 1 115 -2 2 714 274 177 0 0 chr17 17017449 17017511 -78255140 + L1MA7 LINE L1 6208 6269 -22 2 714 265 244 75 166 chr17 17018522 17018841 -78253810 + RLTR15 LTR ERVK 49 338 -21 2 714 236 213 0 21 chr17 17020116 17020164 -78252487 + T-rich Low_complexity Low_complexity 5 51 0 2 714 1190 287 20 20 chr17 17020384 17020726 -78251925 + MTE2b LTR MaLR 32 373 -6 2 714 180 250 43 72 chr17 17021528 17021597 -78251054 + MIRc SINE MIR 50 116 -152 2 714 387 41 0 0 chr17 17021773 17021822 -78250829 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 714 1190 42 0 0 chr17 17022190 17022334 -78250317 - B1_Mm SINE Alu -1 146 3 3 714 236 282 200 56 chr17 17022355 17022445 -78250206 + RSINE1 SINE B4 28 130 -35 3 714 23 54 0 0 chr17 17022445 17022482 -78250169 + AT_rich Low_complexity Low_complexity 1 37 0 3 714 405 0 0 0 chr17 17022533 17022578 -78250073 + (TGGA)n Simple_repeat Simple_repeat 1 45 0 3 714 277 295 0 0 chr17 17022598 17022659 -78249992 - RSINE1 SINE B4 -102 63 3 3 714 1047 73 0 0 chr17 17023084 17023221 -78249430 + B1_Mm SINE Alu 10 146 -1 3 714 21 71 0 0 chr17 17023530 17023572 -78249079 + AT_rich Low_complexity Low_complexity 1 42 0 3 714 291 54 0 0 chr17 17023724 17023761 -78248890 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 714 297 0 0 0 chr17 17023761 17023793 -78248858 + (GA)n Simple_repeat Simple_repeat 2 34 0 3 714 297 0 0 0 chr17 17024628 17024661 -78247990 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 3 714 1474 256 19 19 chr17 17025849 17026212 -78246439 - MTC LTR MaLR -45 376 14 4 714 1019 93 7 20 chr17 17027779 17027932 -78244719 + B2_Mm1t SINE B2 2 152 -41 4 714 564 168 48 8 chr17 17027975 17028101 -78244550 + L1VL1 LINE L1 136 266 -6156 4 714 6372 95 18 15 chr17 17028101 17029784 -78242867 + L1Md_F LINE L1 480 2167 -3716 4 714 5937 57 1 8 chr17 17029794 17030555 -78242096 - L1Md_F2 LINE L1 -1 6581 5826 4 714 877 99 0 15 chr17 17030550 17030683 -78241968 + L1Md_F2 LINE L1 6436 6566 -16 4 714 21 71 0 0 chr17 17030860 17030902 -78241749 + AT_rich Low_complexity Low_complexity 1 42 0 4 714 1827 153 25 42 chr17 17031066 17031469 -78241182 - Lx5 LINE L1 -821 6229 5834 4 714 259 351 13 0 chr17 17031627 17031704 -78240947 + ID SINE ID 3 80 -144 4 714 1663 288 35 36 chr17 17031833 17032497 -78240154 + Lx8 LINE L1 6806 7468 -5 4 714 316 117 0 0 chr17 17032551 17032615 -78240036 + L1_Mus3 LINE L1 6007 6070 -584 5 714 1432 39 44 6 chr17 17033049 17033230 -78239421 + B2_Mm1a SINE B2 2 189 -4 5 714 4102 4 2 0 chr17 17033389 17033846 -78238805 + L1Md_A LINE L1 6125 6582 0 5 714 293 234 71 47 chr17 17033940 17034025 -78238626 - L2a LINE L2 -50 3376 3290 5 714 1519 58 0 0 chr17 17034339 17034529 -78238122 + B2_Mm1t SINE B2 2 191 -2 5 714 1002 177 10 126 chr17 17034794 17035104 -78237547 - L1_Rod LINE L1 -1078 4769 4496 5 714 310 254 0 0 chr17 17035214 17035281 -78237370 + MIRc SINE MIR 92 158 -110 5 714 360 0 0 0 chr17 17035365 17035405 -78237246 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 714 602 293 14 28 chr17 17035412 17035556 -78237095 - B3A SINE B2 -53 145 4 5 714 278 247 123 0 chr17 17035606 17035679 -78236972 - ID4 SINE ID 0 83 2 5 714 267 330 0 11 chr17 17035710 17035799 -78236852 - B1F SINE Alu -7 142 55 6 714 463 248 17 50 chr17 17036743 17036862 -78235789 + PB1D10 SINE Alu 3 117 0 6 714 342 169 0 0 chr17 17036907 17036972 -78235679 + (TA)n Simple_repeat Simple_repeat 1 65 0 6 714 284 227 39 26 chr17 17037296 17037373 -78235278 - MER57E2 LTR ERV1 -314 88 11 6 714 28 61 0 0 chr17 17037599 17037648 -78235003 + AT_rich Low_complexity Low_complexity 1 49 0 6 714 800 199 204 0 chr17 17038120 17038306 -78234345 + URR1B DNA MER1_type 1 224 -1 6 714 548 285 115 34 chr17 17038728 17038968 -78233683 + MLT1D LTR MaLR 2 239 -228 6 715 275 294 128 0 chr17 17039561 17039663 -78232988 - B1F SINE Alu -8 141 27 6 715 225 267 0 0 chr17 17039630 17039675 -78232976 - PB1D7 SINE Alu -61 59 15 6 715 576 116 47 0 chr17 17039729 17039815 -78232836 - RLTR20A2 LTR ERVK 0 541 452 6 715 186 43 0 0 chr17 17039815 17039838 -78232813 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 715 360 0 0 0 chr17 17039838 17039877 -78232774 + (GA)n Simple_repeat Simple_repeat 2 41 0 7 715 1334 226 46 36 chr17 17039877 17040271 -78232380 - RLTR20A2 LTR ERVK -87 491 1 6 715 1517 52 0 35 chr17 17040586 17040785 -78231866 + B2_Mm1t SINE B2 2 193 0 7 715 22 0 0 0 chr17 17040818 17040840 -78231811 + AT_rich Low_complexity Low_complexity 1 22 0 7 715 288 77 0 0 chr17 17041038 17041077 -78231574 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 7 715 186 43 0 0 chr17 17041396 17041419 -78231232 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 7 715 3080 115 20 36 chr17 17041419 17041905 -78230746 - Lx3A LINE L1 -10 6971 6494 7 715 1316 81 5 5 chr17 17041905 17042103 -78230548 - Lx3A LINE L1 -663 6318 6121 7 715 3135 107 14 22 chr17 17042102 17042610 -78230041 + Lx3A LINE L1 5597 6100 -881 7 715 1334 42 0 0 chr17 17042705 17042870 -78229781 - B2_Mm1t SINE B2 -6 187 23 7 715 3169 181 49 29 chr17 17043101 17043937 -78228714 + L1_Mur3 LINE L1 2615 3467 -2413 7 715 224 30 30 0 chr17 17043937 17043970 -78228681 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 7 715 3672 168 23 1 chr17 17043988 17044696 -78227955 - L1_Mur3 LINE L1 -252 5628 4906 8 715 1158 186 102 48 chr17 17044760 17045133 -78227518 - L1_Mur3 LINE L1 -1270 4610 4218 8 715 341 266 40 15 chr17 17045138 17045231 -78227420 + PB1D10 SINE Alu 24 119 -1 8 715 450 300 59 12 chr17 17045267 17045430 -78227221 + B3A SINE B2 1 182 -11 8 715 251 363 110 5 chr17 17045430 17045621 -78227030 + MIRb SINE MIR 44 254 -14 8 715 211 192 26 0 chr17 17045776 17045854 -78226797 + (CA)n Simple_repeat Simple_repeat 2 81 0 8 715 240 35 0 0 chr17 17046063 17046092 -78226559 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 715 207 98 73 0 chr17 17046146 17046187 -78226464 + A-rich Low_complexity Low_complexity 2 45 0 8 715 2450 219 90 9 chr17 17046540 17047098 -78225553 - Lx5 LINE L1 -7 7043 6441 8 715 2172 103 22 9 chr17 17047100 17047423 -78225228 - ORR1A2 LTR MaLR 0 327 1 8 715 7548 128 21 8 chr17 17047423 17048299 -78224352 - ORR1A2-int LTR MaLR 0 1963 1076 8 715 4801 51 2 8 chr17 17048299 17048890 -78223761 + LTRIS_Mus LTR ERV1 1 587 0 8 715 7548 128 21 8 chr17 17048890 17049242 -78223409 - ORR1A2-int LTR MaLR -888 1075 719 8 715 730 200 8 15 chr17 17049202 17049334 -78223317 - MT2B LTR ERVL -314 287 157 9 715 3555 121 43 10 chr17 17049288 17049762 -78222889 - ORR1A2-int LTR MaLR -1187 605 127 8 715 4312 19 0 0 chr17 17049762 17050244 -78222407 + LTRIS_Mm LTR ERV1 1 482 0 9 715 3555 121 43 10 chr17 17050244 17050355 -78222296 - ORR1A2-int LTR MaLR -1666 126 1 8 715 1959 112 15 82 chr17 17050357 17050590 -78222061 - ORR1A2 LTR MaLR -4 323 108 8 715 186 71 0 0 chr17 17050590 17050618 -78222033 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 9 715 288 0 0 0 chr17 17050630 17050662 -78221989 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 9 715 1124 76 0 34 chr17 17050662 17050800 -78221851 - B1_Mus1 SINE Alu -13 135 2 9 715 1959 112 15 82 chr17 17050800 17050903 -78221748 - ORR1A2 LTR MaLR -220 107 7 8 715 3353 144 4 1 chr17 17050903 17051655 -78220996 - Lx5 LINE L1 -987 6063 5305 8 715 1726 153 10 3 chr17 17051653 17051962 -78220689 + L1_Mur3 LINE L1 3589 3899 -1981 9 715 238 135 0 0 chr17 17051961 17051998 -78220653 + Lx7 LINE L1 6880 6916 -780 9 715 1796 210 97 19 chr17 17052014 17052529 -78220122 + Lx7 LINE L1 6967 7521 -175 9 715 195 42 0 0 chr17 17052532 17052556 -78220095 + (TAG)n Simple_repeat Simple_repeat 2 25 0 9 715 21 0 0 0 chr17 17052655 17052676 -78219975 + AT_rich Low_complexity Low_complexity 1 21 0 9 715 4683 72 32 2 chr17 17052685 17053308 -78219343 + L1_Mus2 LINE L1 5925 6566 0 9 715 21 0 0 0 chr17 17053310 17053331 -78219320 + AT_rich Low_complexity Low_complexity 1 21 0 1 715 180 300 33 16 chr17 17053397 17053458 -78219193 - L2 LINE L2 -2937 482 421 1 715 606 244 94 0 chr17 17053723 17053850 -78218801 + RSINE1 SINE B4 6 144 -21 1 715 560 103 0 0 chr17 17053962 17054040 -78218611 - B1_Mus2 SINE Alu -56 91 14 1 715 456 194 9 243 chr17 17053966 17054043 -78218608 - ID_B1 SINE B4 -57 167 95 1 715 1314 83 11 0 chr17 17054043 17054223 -78218428 - B2_Mm1t SINE B2 -8 185 4 1 715 456 194 9 243 chr17 17054223 17054264 -78218387 - ID_B1 SINE B4 -130 94 1 1 715 761 50 0 0 chr17 17054264 17054363 -78218288 - BC1_Mm scRNA scRNA -53 99 1 1 715 1265 241 96 3 chr17 17054576 17054951 -78217700 - MTD LTR MaLR 0 419 10 1 715 183 100 0 0 chr17 17055669 17055699 -78216952 + (T)n Simple_repeat Simple_repeat 1 30 0 1 715 2691 92 24 88 chr17 17055699 17056154 -78216497 - RLTR1B LTR ERV1 -86 426 1 1 715 14485 82 36 66 chr17 17056154 17058911 -78213740 - RLTR1B-int LTR ERV1 -700 3990 1 1 715 1015 131 31 0 chr17 17058911 17059071 -78213580 - RLTR1B LTR ERV1 0 512 348 1 715 416 89 0 0 chr17 17059078 17059134 -78213517 - RLTR1B LTR ERV1 -102 410 355 1 715 447 35 0 0 chr17 17059508 17059565 -78213086 + (TC)n Simple_repeat Simple_repeat 1 57 0 1 715 1370 86 32 0 chr17 17059612 17059799 -78212852 + B2_Mm1t SINE B2 1 193 0 1 715 528 283 13 74 chr17 17059949 17060098 -78212553 + B3A SINE B2 48 187 -11 1 715 222 403 0 0 chr17 17060108 17060180 -78212471 + B4A SINE B4 82 153 -139 1 715 273 337 0 55 chr17 17060117 17060208 -78212443 + PB1D10 SINE Alu 6 91 -26 1 715 327 104 0 0 chr17 17060213 17060261 -78212390 + (GGGA)n Simple_repeat Simple_repeat 3 50 0 1 715 185 111 56 0 chr17 17060469 17060505 -78212146 + (TATG)n Simple_repeat Simple_repeat 1 38 0 1 715 959 152 0 6 chr17 17060956 17061135 -78211516 + GA-rich Low_complexity Low_complexity 2 179 0 1 715 477 0 0 0 chr17 17061135 17061188 -78211463 + (GGAA)n Simple_repeat Simple_repeat 1 53 0 1 715 584 116 11 0 chr17 17061202 17061297 -78211354 + (TAGA)n Simple_repeat Simple_repeat 3 98 0 1 715 180 179 0 0 chr17 17062628 17062667 -78209984 + CT-rich Low_complexity Low_complexity 2 40 0 1 715 446 182 50 0 chr17 17063734 17063833 -78208818 + Lx3B LINE L1 6867 6970 -3 1 715 22 0 0 0 chr17 17063839 17063861 -78208790 + AT_rich Low_complexity Low_complexity 1 22 0 1 715 589 294 68 10 chr17 17064948 17065243 -78207408 + Lx7 LINE L1 5659 5970 -1726 1 715 4721 207 45 18 chr17 17065241 17066491 -78206160 - L1_Mur2 LINE L1 -533 5344 4062 1 715 318 279 16 0 chr17 17066489 17066611 -78206040 + Lx7 LINE L1 5916 6039 -1657 1 715 1531 156 0 104 chr17 17066611 17066939 -78205712 + ORR1A4 LTR MaLR 2 295 -34 1 715 1501 42 10 41 chr17 17066962 17067158 -78205493 + B2_Mm1t SINE B2 2 191 -2 1 715 2225 198 74 0 chr17 17067163 17067623 -78205028 + ORR1A4-int LTR MaLR 2 495 -1468 1 715 1802 229 116 78 chr17 17067665 17068247 -78204404 - RLTR18 LTR ERVK 0 616 11 1 715 3278 56 0 0 chr17 17068247 17068643 -78204008 + MTA_Mm LTR MaLR 1 396 0 1 715 258 350 148 31 chr17 17068975 17069137 -78203514 + B3 SINE B2 26 206 -10 1 715 248 137 20 0 chr17 17069736 17069787 -78202864 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 1 715 305 344 31 15 chr17 17069826 17069956 -78202695 + MT2A LTR ERVL 1 132 -401 1 715 437 266 58 79 chr17 17069974 17070296 -78202355 + MT2A LTR ERVL 277 566 -18 1 715 942 261 87 11 chr17 17071226 17071490 -78201161 - RLTR12B LTR ERVK -238 290 7 1 715 333 338 14 35 chr17 17071544 17071685 -78200966 - B1_Mus2 SINE Alu 0 147 10 1 715 4591 209 45 7 chr17 17071688 17072876 -78199775 + L1_Mur2 LINE L1 4112 5344 -533 1 715 619 278 92 7 chr17 17072879 17073162 -78199489 - Lx7 LINE L1 -1731 5965 5659 1 715 1353 54 0 6 chr17 17074653 17074821 -78197830 + B2_Mm2 SINE B2 2 168 -27 1 715 27 29 0 0 chr17 17074874 17074908 -78197743 + AT_rich Low_complexity Low_complexity 1 34 0 1 715 1184 126 10 10 chr17 17074912 17075104 -78197547 + B2_Mm2 SINE B2 2 193 -2 1 715 8661 112 11 40 chr17 17075106 17076567 -78196084 + Lx3_Mus LINE L1 5592 7009 0 1 715 957 116 0 7 chr17 17076678 17076689 -78195962 - B1_Mus1 SINE Alu 0 148 138 1 715 207 0 0 0 chr17 17076689 17076712 -78195939 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 715 957 116 0 7 chr17 17076712 17076848 -78195803 - B1_Mus1 SINE Alu -11 137 2 1 715 23 0 0 0 chr17 17076849 17076872 -78195779 + AT_rich Low_complexity Low_complexity 1 23 0 1 715 484 190 20 66 chr17 17076975 17077127 -78195524 + L1_Mur2 LINE L1 1905 2049 -3828 1 715 351 0 0 0 chr17 17077127 17077166 -78195485 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 715 4301 92 168 7 chr17 17077166 17077858 -78194793 + RLTR13C2 LTR ERVK 6 808 0 1 715 831 179 13 54 chr17 17077859 17078083 -78194568 + L1_Mur2 LINE L1 2047 2261 -3616 1 715 8381 25 1 4 chr17 17078109 17079096 -78193555 + L1Md_F3 LINE L1 5587 6570 -14 1 715 851 160 12 23 chr17 17079175 17079348 -78193303 + B2_Mm2 SINE B2 25 195 0 1 715 2150 208 109 14 chr17 17079372 17080330 -78192321 + Lx4B LINE L1 5282 6325 -733 1 715 756 155 6 6 chr17 17080310 17080466 -78192185 + Lx4B LINE L1 6025 6180 -878 1 715 3464 223 40 31 chr17 17080503 17081313 -78191338 + RLTR25A LTR ERVK 1 817 -286 1 715 874 160 0 40 chr17 17081314 17081464 -78191187 + B1_Mm SINE Alu 1 144 -3 1 715 507 73 0 0 chr17 17081484 17081552 -78191099 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 715 441 0 0 0 chr17 17081591 17081640 -78191011 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 715 4103 36 70 30 chr17 17081662 17082232 -78190419 + RLTR6_Mm LTR ERV1 1 593 -61 1 715 540 212 256 10 chr17 17082226 17082421 -78190230 + RLTR25A LTR ERVK 861 1103 0 1 715 3631 71 110 6 chr17 17082448 17082959 -78189692 + LTRIS2 LTR ERV1 1 564 0 1 715 1170 105 0 0 chr17 17083821 17083993 -78188658 + (TCC)n Simple_repeat Simple_repeat 3 174 0 1 715 1005 112 0 27 chr17 17084024 17084171 -78188480 - B1_Mus1 SINE Alu -5 143 1 1 715 324 0 0 0 chr17 17084191 17084227 -78188424 + (ATTG)n Simple_repeat Simple_repeat 2 37 0 1 715 2766 221 51 27 chr17 17084257 17084967 -78187684 - Lx4A LINE L1 -3 7055 6329 1 715 2046 159 12 142 chr17 17084973 17085901 -78186750 + L1_Mur2 LINE L1 3295 4022 -1864 1 715 306 115 0 0 chr17 17086738 17086790 -78185861 + (T)n Simple_repeat Simple_repeat 1 52 0 1 715 1180 75 0 0 chr17 17086790 17086937 -78185714 - B1_Mus2 SINE Alu 0 147 1 1 715 406 262 26 90 chr17 17087122 17087195 -78185456 + MT2A LTR ERVL 347 466 -118 1 715 4401 6 0 0 chr17 17087195 17087677 -78184974 + LTRIS_Mm LTR ERV1 1 482 0 1 715 406 262 26 90 chr17 17087677 17087758 -78184893 + MT2A LTR ERVL 405 542 -42 1 715 24 0 0 0 chr17 17087799 17087823 -78184828 + AT_rich Low_complexity Low_complexity 1 24 0 1 715 15964 100 4 1 chr17 17089716 17092828 -78179823 - L1_Mus2 LINE L1 0 6566 3445 1 715 945 76 2 1 chr17 17092828 17092966 -78179685 + B1_Mus1 SINE Alu 11 149 0 1 715 534 158 0 0 chr17 17092978 17093073 -78179578 - L1_Mus2 LINE L1 -2457 3426 3332 1 715 501 261 67 93 chr17 17093073 17093090 -78179561 - B4 SINE B4 -73 219 205 1 715 315 0 0 0 chr17 17093090 17093125 -78179526 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 715 862 78 0 0 chr17 17093125 17093240 -78179411 - B1_Mus1 SINE Alu -32 116 2 1 715 501 261 67 93 chr17 17093240 17093301 -78179350 - B4 SINE B4 -88 204 31 1 715 306 0 0 0 chr17 17093399 17093433 -78179218 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 715 287 228 8 66 chr17 17093650 17093772 -78178879 - Lx6 LINE L1 -11 7449 7335 1 715 974 334 85 13 chr17 17094017 17094720 -78177931 - Lx6 LINE L1 -782 6678 5925 1 715 621 197 0 43 chr17 17094720 17094884 -78177767 - Lx5 LINE L1 -1271 5779 5623 1 715 1435 194 112 3 chr17 17094899 17095204 -78177447 - ORR1A1 LTR MaLR -8 338 1 1 715 2366 233 84 129 chr17 17095214 17096410 -78176241 - Lx5 LINE L1 -276 5604 4433 1 715 1109 75 0 7 chr17 17096410 17096557 -78176094 - B1_Mus1 SINE Alu -1 147 2 1 715 2366 233 84 129 chr17 17096557 17096895 -78175756 - Lx5 LINE L1 -1448 4432 4139 1 715 1600 222 24 18 chr17 17096902 17097355 -78175296 - L1VL2 LINE L1 -5437 898 443 1 715 396 71 0 0 chr17 17097598 17097654 -78174997 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 715 243 352 102 0 chr17 17097736 17097844 -78174807 + B3A SINE B2 25 143 -55 1 715 3042 74 5 2 chr17 17099433 17099828 -78172823 - MTA_Mm LTR MaLR 0 396 1 1 715 1034 80 46 0 chr17 17100767 17100918 -78171733 + L1Md_F2 LINE L1 6413 6570 -12 1 715 274 323 52 64 chr17 17101184 17101356 -78171295 + MT2A LTR ERVL 323 546 -55 1 715 1237 102 17 0 chr17 17101412 17101588 -78171063 - B2_Mm1t SINE B2 -14 179 1 1 715 386 39 19 0 chr17 17101625 17101677 -78170974 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 1 715 3133 210 111 49 chr17 17102500 17102729 -78169922 - RLTR25A LTR ERVK -1 1102 886 1 715 423 0 0 0 chr17 17102729 17102776 -78169875 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 715 270 0 0 0 chr17 17102776 17102805 -78169846 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 715 3133 215 105 51 chr17 17102805 17103580 -78169071 - RLTR25A LTR ERVK -218 885 5 1 715 4188 169 28 10 chr17 17103605 17104729 -78167922 - Lx4A LINE L1 -879 6179 5018 1 715 1836 173 43 83 chr17 17104729 17105127 -78167524 - RLTR41 LTR ERV1 0 446 65 1 715 2448 164 39 12 chr17 17105154 17105672 -78166979 - Lx4A LINE L1 -856 5021 4490 1 715 860 251 179 3 chr17 17105668 17105992 -78166659 - Lx2B LINE L1 -413 6587 6207 1 715 1456 257 73 20 chr17 17106066 17106519 -78166132 - RLTR12B LTR ERVK -41 487 11 1 715 315 331 27 34 chr17 17106567 17106714 -78165937 - B1_Mur3 SINE Alu 0 149 4 1 715 3985 217 78 29 chr17 17107252 17109287 -78163364 + MurSatRep1 Unknown Unknown 1 2135 -2 1 715 464 326 24 28 chr17 17109545 17110766 -78161885 + MurSatRep1 Unknown Unknown 1736 2049 -88 1 715 549 311 63 4 chr17 17110981 17111252 -78161399 + Lx6 LINE L1 7148 7434 -26 1 715 742 249 19 72 chr17 17111375 17111562 -78161089 - RMER20A LTR ERVK 0 516 343 1 715 3534 45 28 5 chr17 17111562 17111988 -78160663 - RLTR10C LTR ERVK 0 436 1 1 715 742 249 19 72 chr17 17111988 17112008 -78160643 - RMER20A LTR ERVK -174 342 321 1 715 619 277 6 12 chr17 17112014 17112175 -78160476 - RMER20A LTR ERVK -352 164 5 1 715 325 274 34 0 chr17 17112411 17112528 -78160123 + L1_Mur2 LINE L1 5543 5663 -214 1 715 1031 109 0 7 chr17 17114067 17114215 -78158436 - B1_Mus1 SINE Alu 0 148 2 1 715 477 0 0 0 chr17 17114444 17114497 -78158154 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 715 722 324 13 45 chr17 17114715 17115113 -78157538 - Lx6 LINE L1 -17 7443 7059 2 715 527 311 68 25 chr17 17115111 17115524 -78157127 - Lx6 LINE L1 -995 6701 6266 2 715 2231 268 29 45 chr17 17115559 17116869 -78155782 - Lx6 LINE L1 -1276 6184 4882 2 715 249 247 68 0 chr17 17116881 17116954 -78155697 + RLTR25A LTR ERVK 11 88 -1015 2 715 2071 238 58 58 chr17 17116954 17117538 -78155113 + RLTR25B LTR ERVK 1 585 -443 2 715 2696 89 144 0 chr17 17117538 17117919 -78154732 - RLTR10C LTR ERVK 0 436 1 2 715 34140 63 3 4 chr17 17117924 17122744 -78149907 - MMERVK10C-int LTR ERVK -5 7675 2832 2 715 500 82 0 0 chr17 17122742 17122815 -78149836 - MMERVK10C-int LTR ERVK -4957 2624 2552 2 715 384 95 0 0 chr17 17122821 17122884 -78149767 - MMERVK10C-int LTR ERVK -5634 1947 1885 2 715 372 173 123 0 chr17 17122875 17122956 -78149695 - MMERVK10C-int LTR ERVK -4227 1179 1089 2 715 784 192 129 82 chr17 17123000 17123341 -78149310 - RMER16-int LTR ERVK -4937 469 312 2 715 888 176 9 42 chr17 17123422 17123635 -78149016 - MMERVK10C-int LTR ERVK -6629 952 747 2 715 1333 97 157 160 chr17 17123634 17123978 -78148673 - MMERVK10C-int LTR ERVK -7238 343 1 2 715 3099 97 5 29 chr17 17123978 17124425 -78148226 - RLTR10C LTR ERVK 0 436 1 2 715 318 148 0 0 chr17 17124456 17124510 -78148141 + RLTR25A LTR ERVK 738 791 -312 2 715 4981 82 1 6 chr17 17124542 17125231 -78147420 - L1Md_F2 LINE L1 0 6582 5897 2 715 1173 74 0 0 chr17 17125232 17125380 -78147271 - B1_Mus1 SINE Alu 0 148 1 2 715 963 280 12 61 chr17 17125380 17125722 -78146929 + RLTR25A LTR ERVK 779 1103 0 2 715 294 178 0 61 chr17 17125986 17126052 -78146599 + RMER3D-int LTR ERVK 9 70 -2772 2 715 1282 94 21 5 chr17 17126052 17126244 -78146407 - B2_Mm2 SINE B2 0 195 1 2 715 6763 144 24 14 chr17 17126288 17127516 -78145135 - Lx3_Mus LINE L1 -11 6998 5758 2 715 291 206 37 47 chr17 17127546 17127653 -78144998 + RMER3D-int LTR ERVK 680 785 -2057 2 715 1092 85 0 0 chr17 17127678 17127819 -78144832 + B1_Mm SINE Alu 1 141 -6 2 715 2072 195 28 20 chr17 17127848 17128355 -78144296 + RMER3D-int LTR ERVK 1023 1533 -1309 2 715 380 57 14 41 chr17 17128386 17128459 -78144192 - L1Md_F2 LINE L1 -1 6581 6511 2 715 880 234 31 44 chr17 17128459 17128687 -78143964 + RLTR18 LTR ERVK 392 616 0 2 715 1529 251 99 2 chr17 17128733 17129136 -78143515 - ORR1A3-int LTR MaLR -1472 491 50 2 715 280 227 13 13 chr17 17129305 17129381 -78143270 - L1_Mur2 LINE L1 -690 5187 5112 2 715 2917 133 26 14 chr17 17129392 17129886 -78142765 + Lx3_Mus LINE L1 6510 7009 0 2 715 32 26 0 0 chr17 17129886 17129925 -78142726 + AT_rich Low_complexity Low_complexity 1 39 0 2 715 1230 48 0 0 chr17 17129931 17130078 -78142573 + B1_Mus1 SINE Alu 1 147 -1 2 715 836 170 4 0 chr17 17130146 17130383 -78142268 + CT-rich Low_complexity Low_complexity 1 237 0 2 715 192 149 0 0 chr17 17130382 17130429 -78142222 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 2 715 909 104 14 14 chr17 17130440 17130586 -78142065 - B1_Mus1 SINE Alu -1 147 2 2 715 1338 177 14 50 chr17 17130724 17131087 -78141564 + L1_Mur2 LINE L1 1905 2254 -3623 2 715 874 154 12 23 chr17 17131170 17131343 -78141308 + B2_Mm2 SINE B2 25 195 0 2 715 1942 238 73 6 chr17 17131371 17132310 -78140341 + Lx4B LINE L1 5282 6285 -773 2 715 789 141 0 19 chr17 17132323 17132482 -78140169 + Lx4A LINE L1 6025 6180 -878 2 715 3958 237 52 53 chr17 17132519 17133391 -78139260 + RLTR25A LTR ERVK 1 885 -218 2 715 446 0 19 0 chr17 17133391 17133445 -78139206 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 715 3958 237 52 53 chr17 17133445 17133676 -78138975 + RLTR25A LTR ERVK 886 1103 0 2 715 33720 66 6 20 chr17 17134092 17139312 -78133339 + L1Md_F3 LINE L1 407 5586 -297 2 715 7814 46 14 0 chr17 17139312 17140282 -78132369 + L1Md_F3 LINE L1 5587 6570 -14 2 715 219 305 8 23 chr17 17140677 17140808 -78131843 + CT-rich Low_complexity Low_complexity 1 129 0 2 715 231 36 0 0 chr17 17140808 17140836 -78131815 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 2 715 780 128 80 29 chr17 17140844 17140981 -78131670 - B1_Mur3 SINE Alu -5 144 1 2 715 499 258 13 14 chr17 17141164 17141313 -78131338 + MT2A LTR ERVL 347 560 -41 2 715 185 31 0 86 chr17 17141345 17141380 -78131271 + (TTTTA)n Simple_repeat Simple_repeat 4 35 0 2 715 5360 131 23 35 chr17 17142498 17143499 -78129152 - L1_Mm LINE L1 -915 4968 3980 2 715 252 77 0 0 chr17 17143876 17143915 -78128736 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 2 715 26 30 0 0 chr17 17144359 17144392 -78128259 + AT_rich Low_complexity Low_complexity 1 33 0 2 715 1113 287 80 19 chr17 17144418 17144833 -78127818 + RMER10A LTR ERVL 1 440 -2 2 715 242 200 31 0 chr17 17144901 17144966 -78127685 + (TTTAA)n Simple_repeat Simple_repeat 4 70 0 2 715 6531 107 29 16 chr17 17145255 17145530 -78127121 - L1_Mm LINE L1 -146 3768 3476 2 715 195 42 0 0 chr17 17145530 17145554 -78127097 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 715 6531 185 71 21 chr17 17145554 17147090 -78125561 - L1_Mm LINE L1 -2407 3476 1870 2 715 439 110 11 42 chr17 17147101 17147196 -78125455 + L1_Mus3 LINE L1 6534 6625 -13 2 715 36792 8 0 0 chr17 17147197 17152570 -78120081 + L1Md_A LINE L1 214 5586 -297 2 715 9062 2 0 0 chr17 17152570 17153565 -78119086 + L1Md_A LINE L1 5587 6581 -1 2 715 2442 154 70 15 chr17 17153623 17154096 -78118555 - L1VL2 LINE L1 -5554 781 283 2 715 860 122 0 87 chr17 17154170 17154215 -78118436 - B1_Mus1 SINE Alu 0 148 117 2 715 243 0 0 0 chr17 17154215 17154242 -78118409 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 715 860 122 0 87 chr17 17154242 17154357 -78118294 - B1_Mus1 SINE Alu -32 116 2 2 715 484 256 80 86 chr17 17154357 17154419 -78118232 - B4 SINE B4 -201 91 31 2 715 467 17 17 0 chr17 17154512 17154572 -78118079 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 715 248 258 11 0 chr17 17154794 17154883 -78117768 - Lx6 LINE L1 -11 7449 7360 2 715 2519 146 90 13 chr17 17154883 17155349 -78117302 - RLTR44C LTR ERVK 0 502 1 2 715 1014 339 72 11 chr17 17155620 17156331 -78116320 - Lx6 LINE L1 -782 6678 5925 2 715 546 206 49 12 chr17 17156331 17156493 -78116158 - Lx5 LINE L1 -1271 5779 5612 2 715 1664 149 6 105 chr17 17156497 17156542 -78116109 - ORR1A3 LTR MaLR -8 318 286 2 715 1272 104 6 0 chr17 17156542 17156724 -78115927 - B2_Mm1a SINE B2 -8 185 3 2 715 1664 149 6 105 chr17 17156724 17157031 -78115620 - ORR1A3 LTR MaLR -41 285 1 2 715 1604 249 64 65 chr17 17157031 17157945 -78114706 - Lx6 LINE L1 -267 5619 4741 2 715 918 136 0 13 chr17 17157958 17158107 -78114544 - B1_Mus1 SINE Alu 0 148 2 2 715 434 212 120 63 chr17 17158111 17158253 -78114398 - Lx6 LINE L1 -1448 4432 4279 2 715 306 50 0 0 chr17 17158253 17158293 -78114358 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 2 715 434 212 120 63 chr17 17158293 17158341 -78114310 - Lx6 LINE L1 -1602 4278 4231 2 715 1465 52 10 0 chr17 17158357 17158549 -78114102 + L1Md_F2 LINE L1 6377 6570 -12 2 715 186 43 0 0 chr17 17158882 17158905 -78113746 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2 715 310 200 0 23 chr17 17158913 17159000 -78113651 - Lx6 LINE L1 -1662 4218 4134 2 715 1362 219 18 95 chr17 17159001 17159109 -78113542 - L1VL2 LINE L1 -5437 898 825 2 715 4329 74 2 5 chr17 17159109 17159694 -78112957 - L1Md_F2 LINE L1 0 6582 6000 2 715 1362 219 18 95 chr17 17159694 17160079 -78112572 - L1VL2 LINE L1 -5511 824 443 2 715 23 68 0 0 chr17 17162169 17162213 -78110438 + AT_rich Low_complexity Low_complexity 1 44 0 2 715 390 274 18 73 chr17 17163360 17163525 -78109126 + MT2B LTR ERVL 402 557 -44 2 715 263 302 0 39 chr17 17163531 17163613 -78109038 + A-rich Low_complexity Low_complexity 6 84 0 2 715 1113 84 0 0 chr17 17163613 17163756 -78108895 + B1_Mm SINE Alu 3 145 -2 2 715 263 302 0 39 chr17 17163756 17163828 -78108823 + A-rich Low_complexity Low_complexity 85 154 0 2 715 440 153 0 12 chr17 17164244 17164330 -78108321 + (TA)n Simple_repeat Simple_repeat 1 85 0 2 715 268 300 202 16 chr17 17164635 17164818 -78107833 - RLTR25B LTR ERVK 0 1028 812 2 715 1460 0 0 22 chr17 17164865 17165049 -78107602 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 2 715 460 43 22 101 chr17 17165052 17165231 -78107420 + CT-rich Low_complexity Low_complexity 2 166 0 2 715 2664 230 71 58 chr17 17165231 17165306 -78107345 - RLTR25B LTR ERVK -140 888 813 2 715 378 74 0 0 chr17 17165306 17165360 -78107291 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 715 2664 230 71 58 chr17 17165360 17166158 -78106493 - RLTR25B LTR ERVK -216 812 5 2 715 2579 187 39 18 chr17 17166193 17166684 -78105967 - Lx4A LINE L1 -889 6169 5662 2 715 3596 119 29 11 chr17 17166684 17167238 -78105413 - LTRIS2 LTR ERV1 0 564 1 2 715 4969 167 15 168 chr17 17167238 17167695 -78104956 - Lx4A LINE L1 -222 5655 5402 2 715 7442 51 38 5 chr17 17167695 17168658 -78103993 + L1Md_F2 LINE L1 5588 6582 0 2 715 4969 167 15 168 chr17 17168658 17169064 -78103587 - Lx4A LINE L1 -476 5401 5022 2 715 1705 159 115 90 chr17 17169064 17169499 -78103152 - RLTR41 LTR ERV1 0 446 1 2 715 4969 167 15 168 chr17 17169499 17170047 -78102604 - Lx4A LINE L1 -856 5021 4490 2 715 1286 240 93 0 chr17 17170040 17170394 -78102257 - Lx4B LINE L1 -466 6592 6206 2 716 611 262 66 25 chr17 17170467 17170663 -78101988 - RLTR12B LTR ERVK -42 486 283 2 716 333 335 45 17 chr17 17170650 17170829 -78101822 + RLTR12B LTR ERVK 165 348 -180 2 716 457 65 0 0 chr17 17170820 17170882 -78101769 + B1_Mm SINE Alu 86 147 0 2 716 1042 293 72 10 chr17 17170942 17171356 -78101295 + RMER10A LTR ERVL 1 440 -2 2 716 217 215 31 0 chr17 17171424 17171489 -78101162 + (TTTAA)n Simple_repeat Simple_repeat 4 70 0 2 716 806 177 0 70 chr17 17171554 17171712 -78100939 - B1_Mus1 SINE Alu -1 147 1 2 716 1493 103 15 132 chr17 17171946 17172010 -78100641 - MusHAL1 LINE L1 -147 2565 2520 2 716 859 137 0 19 chr17 17172010 17172166 -78100485 + L1_Mus2 LINE L1 6414 6566 0 2 716 1493 103 15 132 chr17 17172166 17172426 -78100225 - MusHAL1 LINE L1 -193 2519 2279 2 716 23 33 0 0 chr17 17172467 17172497 -78100154 + AT_rich Low_complexity Low_complexity 1 30 0 2 716 917 109 59 16 chr17 17172763 17172950 -78099701 - MusHAL1 LINE L1 -441 2271 2077 2 716 257 203 0 17 chr17 17172995 17173055 -78099596 - RLTR25A LTR ERVK 0 1103 1045 2 716 1211 264 38 0 chr17 17173082 17173449 -78099202 - Lx2B LINE L1 -413 6587 6207 2 716 563 280 6 28 chr17 17173521 17173701 -78098950 - RLTR12B LTR ERVK -41 487 312 2 716 6552 231 21 49 chr17 17173732 17175238 -78097413 + MurSatRep1 Unknown Unknown 106 1589 -548 2 716 222 128 0 0 chr17 17175238 17175277 -78097374 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 2 716 6552 231 21 49 chr17 17175277 17175861 -78096790 + MurSatRep1 Unknown Unknown 1590 2137 0 2 716 476 330 18 20 chr17 17176114 17176171 -78096480 + MurSatRep1 Unknown Unknown 1747 1770 -367 2 716 346 314 7 0 chr17 17176171 17176324 -78096327 + MMSAT4 Satellite Satellite 15 168 0 2 716 476 330 18 20 chr17 17176324 17177004 -78095647 + MurSatRep1 Unknown Unknown 1771 2053 -84 2 716 476 279 4 4 chr17 17176945 17177167 -78095484 + MMSAT4 Satellite Satellite 1 222 0 2 716 487 327 16 14 chr17 17177052 17177592 -78095059 + MurSatRep1 Unknown Unknown 1747 2049 -88 2 716 395 301 3 3 chr17 17177533 17177755 -78094896 + MMSAT4 Satellite Satellite 1 222 0 2 716 294 333 35 30 chr17 17177640 17177868 -78094783 + MurSatRep1 Unknown Unknown 1747 1919 -218 2 716 376 275 7 7 chr17 17177868 17178007 -78094644 + MMSAT4 Satellite Satellite 30 168 0 2 716 294 333 35 30 chr17 17178007 17178177 -78094474 + MurSatRep1 Unknown Unknown 1920 2049 -88 2 716 338 282 44 22 chr17 17178113 17178334 -78094317 + MMSAT4 Satellite Satellite 1 225 0 2 716 372 325 59 4 chr17 17178374 17178646 -78094005 + Lx6 LINE L1 7147 7433 -27 2 716 1811 274 34 6 chr17 17178778 17179280 -78093371 - RMER20A LTR ERVK 0 516 1 3 716 443 254 0 0 chr17 17179506 17179624 -78093027 + L1_Mur2 LINE L1 5543 5660 -217 3 716 3650 100 8 2 chr17 17180221 17180742 -78091909 - L1_Mus1 LINE L1 0 6567 6044 3 716 2756 73 8 0 chr17 17180745 17181130 -78091521 + L1_Mus1 LINE L1 5640 6027 -539 3 716 792 164 7 46 chr17 17181221 17181374 -78091277 - B1_Mus1 SINE Alu 0 148 2 3 716 252 0 0 0 chr17 17182324 17182352 -78090299 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 716 486 0 0 0 chr17 17182352 17182405 -78090246 + (GA)n Simple_repeat Simple_repeat 1 54 0 3 716 645 336 18 48 chr17 17182622 17183019 -78089632 - Lx6 LINE L1 -17 7443 7059 3 716 1984 271 86 57 chr17 17183031 17184643 -78088008 - Lx6 LINE L1 -785 6675 4976 3 716 1242 113 5 0 chr17 17184643 17184828 -78087823 - B2_Mm1t SINE B2 -5 188 3 3 716 1750 258 92 72 chr17 17184828 17184931 -78087720 - Lx6 LINE L1 -905 4975 4881 3 716 668 198 134 94 chr17 17185015 17185216 -78087435 + RLTR25B LTR ERVK 1 209 -894 3 716 4679 48 0 3 chr17 17185216 17186075 -78086576 - L1Md_F3 LINE L1 -407 6177 5321 3 716 3588 45 5 2 chr17 17186075 17186516 -78086135 + L1Md_F3 LINE L1 6126 6567 -17 3 716 2151 269 58 76 chr17 17186533 17187031 -78085620 + RLTR25B LTR ERVK 200 704 -324 3 716 5074 55 38 3 chr17 17187031 17187692 -78084959 - L1Md_F2 LINE L1 0 6582 5899 3 716 1126 95 0 0 chr17 17187695 17187843 -78084808 - B1_Mus1 SINE Alu 0 148 1 3 716 2151 269 58 76 chr17 17187843 17188184 -78084467 + RLTR25B LTR ERVK 705 1028 0 3 716 354 152 0 57 chr17 17188448 17188518 -78084133 + RMER3D-int LTR ERVK 9 74 -2768 3 716 450 0 0 0 chr17 17188533 17188583 -78084068 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 3 716 1033 107 7 0 chr17 17188587 17188737 -78083914 - B2_Mm2 SINE B2 -44 151 1 3 716 7184 132 23 7 chr17 17188768 17190001 -78082650 - Lx3_Mus LINE L1 0 7009 5758 3 716 289 206 37 47 chr17 17190031 17190138 -78082513 + RMER3D-int LTR ERVK 680 785 -2057 3 716 1150 76 0 0 chr17 17190163 17190308 -78082343 + B1_Mm SINE Alu 1 145 -2 3 716 2141 194 30 18 chr17 17190332 17190837 -78081814 + RMER3D-int LTR ERVK 1023 1533 -1309 3 716 258 192 26 0 chr17 17191103 17191181 -78081470 + RMER3D-int LTR ERVK 1153 1232 -1094 3 716 11909 67 3 2 chr17 17191234 17193590 -78079061 - L1Md_F2 LINE L1 -1 6581 4223 3 716 306 137 41 0 chr17 17193591 17193664 -78078987 + RMER3D-int LTR ERVK 1174 1249 -1077 3 716 2476 209 19 46 chr17 17193674 17194352 -78078299 + RMER3D-int LTR ERVK 1928 2587 -255 3 716 922 47 93 0 chr17 17194384 17194552 -78078099 + L1Md_F3 LINE L1 6430 6584 0 3 716 329 43 0 21 chr17 17195002 17195050 -78077601 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 3 716 1135 50 0 7 chr17 17195052 17195194 -78077457 - B1_Mm SINE Alu -6 141 1 3 716 3774 218 54 113 chr17 17195554 17195777 -78076874 - RLTR25A LTR ERVK 0 1103 914 3 716 765 76 0 0 chr17 17195777 17195895 -78076756 + (TC)n Simple_repeat Simple_repeat 1 118 0 3 716 3774 218 54 113 chr17 17195895 17196843 -78075808 - RLTR25A LTR ERVK -190 913 1 3 716 780 148 0 19 chr17 17196880 17197039 -78075612 - Lx4B LINE L1 -878 6180 6025 3 716 2047 229 72 14 chr17 17197019 17197975 -78074676 - Lx4B LINE L1 -733 6325 5304 3 716 939 106 0 26 chr17 17198022 17198177 -78074474 - B2_Mm2 SINE B2 0 195 45 3 716 1038 95 44 0 chr17 17198228 17198386 -78074265 + B2_Mm1t SINE B2 23 187 -6 3 716 762 94 15 52 chr17 17198386 17198462 -78074189 - Lx3_Mus LINE L1 -511 6498 6427 3 716 6729 73 16 0 chr17 17198462 17199341 -78073310 - RLTR13B1 LTR ERVK 0 893 1 3 716 762 94 15 52 chr17 17199341 17199399 -78073252 - Lx3_Mus LINE L1 -583 6426 6369 3 716 310 238 12 0 chr17 17199591 17199671 -78072980 + ORR1A3-int LTR MaLR 44 124 -1839 3 716 204 200 0 0 chr17 17199758 17199818 -78072833 + CT-rich Low_complexity Low_complexity 2 61 0 3 716 216 0 0 0 chr17 17199821 17199845 -78072806 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 3 716 910 117 0 35 chr17 17199845 17199987 -78072664 - B1_Mus2 SINE Alu -10 137 1 3 716 445 262 27 60 chr17 17200171 17200321 -78072330 + MT2A LTR ERVL 347 542 -42 3 716 5256 136 24 29 chr17 17201430 17202421 -78070230 - L1_Mm LINE L1 -918 4965 3980 3 716 315 0 0 0 chr17 17202521 17202556 -78070095 + (T)n Simple_repeat Simple_repeat 1 35 0 3 716 1213 61 0 0 chr17 17202556 17202703 -78069948 - B1_Mus2 SINE Alu 0 147 1 3 716 26 30 0 0 chr17 17203475 17203508 -78069143 + AT_rich Low_complexity Low_complexity 1 33 0 3 716 1165 277 80 22 chr17 17203534 17203947 -78068704 + RMER10A LTR ERVL 1 437 -5 3 716 251 200 31 0 chr17 17204017 17204082 -78068569 + (TTTAA)n Simple_repeat Simple_repeat 4 70 0 3 716 10728 112 17 20 chr17 17204370 17204643 -78068008 - MusHAL1 LINE L1 -146 2566 2276 3 716 243 0 0 0 chr17 17204643 17204670 -78067981 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 716 10728 112 17 20 chr17 17204670 17206301 -78066350 - MusHAL1 LINE L1 -437 2275 669 3 716 397 125 20 59 chr17 17206313 17206415 -78066236 + Lx LINE L1 6551 6648 -6 3 716 2567 145 65 15 chr17 17206416 17206891 -78065760 - L1VL2 LINE L1 -5554 781 283 3 716 898 143 0 45 chr17 17206977 17207131 -78065520 - B1_Mus1 SINE Alu 0 148 2 3 716 351 44 0 0 chr17 17207303 17207348 -78065303 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 716 433 312 126 28 chr17 17207569 17207925 -78064726 - Lx6 LINE L1 -11 7449 7059 3 716 252 0 0 0 chr17 17208092 17208120 -78064531 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 3 716 1132 108 0 0 chr17 17208120 17208277 -78064374 - B2_Mm2 SINE B2 -38 157 1 3 716 813 329 81 10 chr17 17208354 17208858 -78063793 - Lx6 LINE L1 -996 6464 5925 3 716 582 206 50 6 chr17 17208858 17209019 -78063632 - Lx5 LINE L1 -1271 5779 5612 3 716 1675 149 6 105 chr17 17209023 17209068 -78063583 - ORR1A3 LTR MaLR -8 318 286 3 716 1319 72 16 11 chr17 17209068 17209250 -78063401 - B2_Mm1a SINE B2 -8 185 3 3 716 1675 149 6 105 chr17 17209250 17209557 -78063094 - ORR1A3 LTR MaLR -41 285 1 3 716 2082 240 96 79 chr17 17209557 17210485 -78062166 - Lx5 LINE L1 -269 5611 4685 3 716 1065 102 0 7 chr17 17210485 17210633 -78062018 - B1_Mus1 SINE Alu -1 147 1 3 716 2082 230 104 34 chr17 17210633 17210871 -78061780 - Lx5 LINE L1 -1196 4684 4427 3 716 23 0 0 0 chr17 17210871 17210894 -78061757 + AT_rich Low_complexity Low_complexity 1 23 0 3 716 1026 96 0 14 chr17 17210907 17211055 -78061596 - B1_Mus1 SINE Alu -1 147 2 3 716 2613 66 3 0 chr17 17211103 17211453 -78061198 - L1Md_F2 LINE L1 -232 6350 6000 3 716 1161 248 8 43 chr17 17211453 17211849 -78060802 - L1VL2 LINE L1 -5511 824 443 3 716 7066 38 25 0 chr17 17212764 17213615 -78059036 + L1Md_T LINE L1 5710 6581 -1 3 716 207 100 0 0 chr17 17213626 17213656 -78058995 + (GAAAA)n Simple_repeat Simple_repeat 4 33 0 3 716 23 68 0 0 chr17 17214377 17214421 -78058230 + AT_rich Low_complexity Low_complexity 1 44 0 3 716 370 288 18 73 chr17 17215569 17215734 -78056917 + MT2B LTR ERVL 402 557 -44 3 716 225 300 32 32 chr17 17215740 17215823 -78056828 + A-rich Low_complexity Low_complexity 6 88 0 3 716 1124 91 0 0 chr17 17215823 17215966 -78056685 + B1_Mm SINE Alu 3 145 -2 3 716 225 300 32 32 chr17 17215966 17216037 -78056614 + A-rich Low_complexity Low_complexity 89 160 0 3 716 459 78 0 0 chr17 17216456 17216520 -78056131 + (TA)n Simple_repeat Simple_repeat 1 64 0 3 716 475 256 141 53 chr17 17216826 17217032 -78055619 - RLTR25A LTR ERVK 0 1103 880 3 716 618 118 0 0 chr17 17217056 17217158 -78055493 + (TC)n Simple_repeat Simple_repeat 1 102 0 3 716 2786 214 114 32 chr17 17217163 17217936 -78054715 - RLTR25A LTR ERVK -136 967 132 3 716 1241 165 3 127 chr17 17217936 17218276 -78054375 - L1_Mur2 LINE L1 -1090 4787 4490 3 716 1095 252 95 14 chr17 17218269 17218627 -78054024 - Lx4B LINE L1 -466 6592 6206 3 716 647 260 45 30 chr17 17218698 17218900 -78053751 - RLTR12B LTR ERVK -41 487 283 3 716 244 327 9 103 chr17 17218886 17219002 -78053649 + RLTR12A LTR ERVK 162 266 -302 3 716 454 102 22 3 chr17 17219023 17219108 -78053543 + B1_Mm SINE Alu 30 147 0 3 716 1165 278 65 12 chr17 17219175 17219593 -78053058 + RMER10A LTR ERVL 1 440 -2 3 716 217 215 31 0 chr17 17219661 17219726 -78052925 + (TTTAA)n Simple_repeat Simple_repeat 4 70 0 3 716 816 123 0 88 chr17 17219791 17219951 -78052700 - B1_Mm SINE Alu -1 146 1 3 716 269 75 0 117 chr17 17220186 17220246 -78052405 - MusHAL1 LINE L1 -150 2562 2510 3 716 880 137 0 19 chr17 17220247 17220403 -78052248 + L1_Mus2 LINE L1 6414 6566 0 3 716 1541 112 18 43 chr17 17220411 17220666 -78051985 - MusHAL1 LINE L1 -173 2539 2289 3 716 219 36 0 0 chr17 17220666 17220694 -78051957 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 716 1541 112 18 43 chr17 17220694 17220718 -78051933 - MusHAL1 LINE L1 -424 2288 2267 3 716 22 56 0 0 chr17 17220719 17220755 -78051896 + AT_rich Low_complexity Low_complexity 1 36 0 3 716 909 109 59 16 chr17 17221024 17221211 -78051440 - MusHAL1 LINE L1 -441 2271 2077 3 716 289 186 0 17 chr17 17221256 17221316 -78051335 - RLTR25A LTR ERVK 0 1103 1045 3 716 1198 274 43 0 chr17 17221339 17221711 -78050940 - Lx4B LINE L1 -465 6593 6206 3 716 638 257 6 28 chr17 17221782 17221962 -78050689 - RLTR12B LTR ERVK -41 487 312 3 716 200 31 62 0 chr17 17221980 17222012 -78050639 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 716 257 363 43 36 chr17 17222042 17222182 -78050469 - B4A SINE B4 -87 205 65 3 716 4832 205 20 37 chr17 17222184 17223452 -78049199 + MurSatRep1 Unknown Unknown 311 1557 -580 3 716 209 167 0 18 chr17 17223481 17223536 -78049115 + (TCTG)n Simple_repeat Simple_repeat 3 56 0 3 716 1562 251 14 20 chr17 17223602 17224106 -78048545 + MurSatRep1 Unknown Unknown 1635 2135 -2 3 716 503 330 29 34 chr17 17224358 17224418 -78048233 + MurSatRep1 Unknown Unknown 1740 1751 -386 3 716 367 283 11 7 chr17 17224418 17224638 -78048013 + MMSAT4 Satellite Satellite 1 220 0 3 716 503 330 29 34 chr17 17224638 17226326 -78046325 + MurSatRep1 Unknown Unknown 1752 2072 -65 3 716 335 294 29 18 chr17 17226263 17226569 -78046082 + MMSAT4 Satellite Satellite 1 309 0 3 716 309 332 59 4 chr17 17226609 17226881 -78045770 + Lx6 LINE L1 7147 7433 -27 3 716 1861 269 34 6 chr17 17227012 17227514 -78045137 - RMER20A LTR ERVK 0 516 1 3 716 483 237 0 0 chr17 17227743 17227861 -78044790 + L1_Mur2 LINE L1 5543 5660 -217 3 716 3312 108 44 4 chr17 17228438 17228942 -78043709 - L1_Mus1 LINE L1 0 6567 6044 3 716 2706 73 8 0 chr17 17228945 17229330 -78043321 + L1_Mus1 LINE L1 5640 6027 -539 3 716 772 177 7 21 chr17 17229421 17229565 -78043086 - B1_Mus1 SINE Alu 0 148 7 3 716 207 0 0 0 chr17 17230523 17230546 -78042105 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 716 387 73 0 0 chr17 17230546 17230601 -78042050 + (GA)n Simple_repeat Simple_repeat 2 56 0 3 716 625 337 20 41 chr17 17230818 17231211 -78041440 - Lx6 LINE L1 -17 7443 7059 3 716 1862 274 90 55 chr17 17231220 17232824 -78039827 - Lx6 LINE L1 -782 6678 4979 3 716 1070 95 125 0 chr17 17232824 17232992 -78039659 - B2_Mm1t SINE B2 -3 190 2 3 716 1608 265 97 66 chr17 17232992 17233094 -78039557 - Lx6 LINE L1 -902 4978 4881 3 716 2026 227 163 37 chr17 17233178 17233826 -78038825 + RLTR25B LTR ERVK 1 791 -312 3 716 4425 69 3 0 chr17 17233870 17234438 -78038213 - L1Md_F2 LINE L1 -8 6574 6005 3 716 563 34 57 0 chr17 17234446 17234534 -78038117 - L1Md_T LINE L1 -1 6581 6489 4 716 299 136 0 175 chr17 17234592 17234656 -78037995 + RMER3D-int LTR ERVK 9 60 -2782 4 716 1171 117 21 0 chr17 17234656 17234844 -78037807 - B2_Mm2 SINE B2 -3 192 1 4 716 299 136 0 175 chr17 17234844 17234859 -78037792 + RMER3D-int LTR ERVK 61 74 -2768 4 716 7164 130 22 22 chr17 17234876 17236128 -78036523 - Lx3_Mus LINE L1 0 7009 5758 4 716 1151 64 0 0 chr17 17236294 17236435 -78036216 + B1_Mm SINE Alu 5 145 -2 4 716 2129 193 26 16 chr17 17236456 17236962 -78035689 + RMER3D-int LTR ERVK 1023 1533 -1309 4 716 5039 76 0 7 chr17 17237035 17237714 -78034937 - L1Md_F2 LINE L1 -12 6570 5897 4 716 1208 61 0 0 chr17 17237715 17237863 -78034788 - B1_Mus1 SINE Alu 0 148 1 4 716 1004 280 12 56 chr17 17237863 17238203 -78034448 + RLTR25B LTR ERVK 779 1103 0 3 716 334 145 0 61 chr17 17238465 17238531 -78034120 + RMER3D-int LTR ERVK 9 70 -2772 3 716 1119 132 26 10 chr17 17238531 17238723 -78033928 - B2_Mm2 SINE B2 0 195 1 4 716 26 50 0 0 chr17 17238737 17238777 -78033874 + AT_rich Low_complexity Low_complexity 1 40 0 4 716 315 49 0 0 chr17 17238825 17238866 -78033785 - Lx3_Mus LINE L1 -1211 5798 5758 4 716 275 200 43 43 chr17 17238896 17238990 -78033661 + RMER3D-int LTR ERVK 680 773 -2069 3 716 1152 82 0 0 chr17 17239028 17239175 -78033476 + B1_Mm SINE Alu 1 147 0 4 716 2944 212 40 58 chr17 17239188 17240049 -78032602 + RMER3D-int LTR ERVK 1014 1858 -984 3 716 11371 63 7 26 chr17 17240108 17242402 -78030249 - L1Md_F2 LINE L1 -2 6580 4351 4 716 761 111 26 0 chr17 17242402 17242519 -78030132 - PB1D9 SINE Alu 0 120 1 4 716 11371 74 3 46 chr17 17242519 17242646 -78030005 - L1Md_F2 LINE L1 -1533 4350 4223 4 716 279 151 41 0 chr17 17242647 17242720 -78029931 + RMER3D-int LTR ERVK 1174 1249 -1077 4 716 2994 215 32 40 chr17 17242730 17243622 -78029029 + RMER3D-int LTR ERVK 1928 2812 -30 4 716 213 204 0 0 chr17 17243624 17243673 -78028978 + T-rich Low_complexity Low_complexity 5 53 0 4 716 573 53 0 0 chr17 17243677 17243752 -78028899 - B1_Mur4 SINE Alu -7 143 69 4 716 5256 96 3 1 chr17 17243757 17244480 -78028171 + L1_Mus1 LINE L1 5844 6567 0 4 716 1819 275 51 44 chr17 17244766 17245378 -78027273 + RLTR18 LTR ERVK 1 616 0 4 716 1626 244 87 5 chr17 17245420 17245832 -78026819 - ORR1A3-int LTR MaLR -1468 495 50 4 716 725 109 15 52 chr17 17246014 17246072 -78026579 + Lx3_Mus LINE L1 6369 6426 -583 4 716 6761 74 12 0 chr17 17246072 17246954 -78025697 + RLTR13B1 LTR ERVK 1 893 0 4 716 725 109 15 52 chr17 17246954 17247030 -78025621 + Lx3_Mus LINE L1 6427 6498 -511 4 716 1048 93 43 4 chr17 17247030 17247205 -78025446 - B2_Mm1t SINE B2 -2 193 20 4 716 951 106 0 26 chr17 17247257 17247412 -78025239 + B2_Mm2 SINE B2 45 195 0 4 716 2025 226 69 14 chr17 17247459 17248387 -78024264 + Lx2B LINE L1 5304 6291 -709 4 716 753 160 0 19 chr17 17248394 17248553 -78024098 + Lx4A LINE L1 6025 6180 -878 4 716 3524 238 51 43 chr17 17248590 17249457 -78023194 + RLTR25A LTR ERVK 1 884 -219 4 716 210 37 0 0 chr17 17249457 17249484 -78023167 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 716 3524 238 51 43 chr17 17249484 17249600 -78023051 + RLTR25A LTR ERVK 885 992 -111 4 716 553 209 239 30 chr17 17249597 17249794 -78022857 + RLTR25A LTR ERVK 866 1103 0 4 716 1183 56 0 0 chr17 17250154 17250298 -78022353 + B1_Mm SINE Alu 1 144 -3 4 716 387 0 0 0 chr17 17250298 17250341 -78022310 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 4 716 31443 68 0 6 chr17 17250408 17255632 -78017019 + L1Md_F2 LINE L1 298 5589 -297 4 716 7977 54 3 0 chr17 17255632 17256625 -78016026 + L1Md_F2 LINE L1 5590 6585 0 4 716 228 200 0 0 chr17 17257082 17257142 -78015509 + CT-rich Low_complexity Low_complexity 2 61 0 4 716 942 116 0 52 chr17 17257155 17257310 -78015341 - B1_Mus2 SINE Alu 0 147 1 4 716 477 262 27 60 chr17 17257494 17257644 -78015007 + MT2A LTR ERVL 345 542 -42 4 716 23 0 0 0 chr17 17257685 17257708 -78014943 + AT_rich Low_complexity Low_complexity 1 23 0 4 716 5499 130 25 13 chr17 17258761 17258990 -78013661 - L1_Mm LINE L1 -918 4965 4736 4 716 198 0 0 0 chr17 17258990 17259012 -78013639 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 716 5499 130 25 13 chr17 17259012 17259757 -78012894 - L1_Mm LINE L1 -1148 4735 3980 4 716 26 30 0 0 chr17 17260614 17260647 -78012004 + AT_rich Low_complexity Low_complexity 1 33 0 4 716 1130 283 80 19 chr17 17260673 17261088 -78011563 + RMER10A LTR ERVL 1 440 -2 4 716 182 111 62 31 chr17 17261156 17261221 -78011430 + (TTTAA)n Simple_repeat Simple_repeat 4 70 0 4 716 10879 107 16 27 chr17 17261509 17261782 -78010869 - MusHAL1 LINE L1 -146 2566 2276 4 716 243 0 0 0 chr17 17261782 17261809 -78010842 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 716 10879 107 16 27 chr17 17261809 17263454 -78009197 - MusHAL1 LINE L1 -437 2275 669 4 716 397 125 20 59 chr17 17263466 17263568 -78009083 + Lx LINE L1 6551 6648 -6 4 716 2567 145 65 15 chr17 17263569 17264044 -78008607 - L1VL2 LINE L1 -5554 781 283 4 716 898 143 0 45 chr17 17264130 17264284 -78008367 - B1_Mus1 SINE Alu 0 148 2 4 716 462 49 0 0 chr17 17264456 17264517 -78008134 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 716 433 312 126 28 chr17 17264738 17265094 -78007557 - Lx6 LINE L1 -11 7449 7059 4 716 252 0 0 0 chr17 17265261 17265289 -78007362 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 4 716 1132 108 0 0 chr17 17265289 17265446 -78007205 - B2_Mm2 SINE B2 -38 157 1 4 716 813 329 81 10 chr17 17265523 17266027 -78006624 - Lx6 LINE L1 -996 6464 5925 4 716 582 206 50 6 chr17 17266027 17266188 -78006463 - Lx5 LINE L1 -1271 5779 5612 4 716 1694 146 6 105 chr17 17266192 17266237 -78006414 - ORR1A3 LTR MaLR -8 318 286 4 716 1319 72 16 11 chr17 17266237 17266419 -78006232 - B2_Mm1a SINE B2 -8 185 3 4 716 1694 146 6 105 chr17 17266419 17266726 -78005925 - ORR1A3 LTR MaLR -41 285 1 4 716 2084 241 95 79 chr17 17266726 17267655 -78004996 - Lx5 LINE L1 -269 5611 4685 4 716 1065 102 0 7 chr17 17267655 17267803 -78004848 - B1_Mus1 SINE Alu -1 147 1 4 716 2084 230 104 34 chr17 17267803 17268041 -78004610 - Lx5 LINE L1 -1196 4684 4427 4 716 23 0 0 0 chr17 17268041 17268064 -78004587 + AT_rich Low_complexity Low_complexity 1 23 0 4 716 1005 103 0 14 chr17 17268077 17268225 -78004426 - B1_Mus1 SINE Alu -1 147 2 4 716 2613 66 3 0 chr17 17268273 17268623 -78004028 - L1Md_F2 LINE L1 -232 6350 6000 4 716 1167 229 3 18 chr17 17268623 17269017 -78003634 - L1VL4 LINE L1 -5511 824 443 4 716 7044 39 25 0 chr17 17269928 17270779 -78001872 + L1Md_T LINE L1 5710 6581 -1 4 716 207 100 0 0 chr17 17270790 17270820 -78001831 + (GAAAA)n Simple_repeat Simple_repeat 4 33 0 4 716 23 68 0 0 chr17 17271541 17271585 -78001066 + AT_rich Low_complexity Low_complexity 1 44 0 4 716 370 288 18 73 chr17 17272733 17272898 -77999753 + MT2B LTR ERVL 402 557 -44 4 716 225 300 32 32 chr17 17272904 17272987 -77999664 + A-rich Low_complexity Low_complexity 6 88 0 4 716 1124 91 0 0 chr17 17272987 17273130 -77999521 + B1_Mm SINE Alu 3 145 -2 4 716 225 300 32 32 chr17 17273130 17273201 -77999450 + A-rich Low_complexity Low_complexity 89 160 0 4 716 531 69 0 0 chr17 17273620 17273692 -77998959 + (TA)n Simple_repeat Simple_repeat 1 72 0 4 716 3103 212 93 79 chr17 17273998 17274228 -77998423 - RLTR25A LTR ERVK 0 1103 890 4 716 989 140 6 0 chr17 17274228 17274406 -77998245 + (TC)n Simple_repeat Simple_repeat 2 180 0 4 716 3103 212 93 79 chr17 17274406 17275134 -77997517 - RLTR25A LTR ERVK -214 889 132 4 716 1241 165 3 127 chr17 17275134 17275474 -77997177 - L1_Mur2 LINE L1 -1090 4787 4490 4 716 1095 252 95 14 chr17 17275467 17275825 -77996826 - Lx4B LINE L1 -466 6592 6206 4 716 647 260 45 30 chr17 17275896 17276098 -77996553 - RLTR12B LTR ERVK -41 487 283 4 716 244 327 9 103 chr17 17276084 17276200 -77996451 + RLTR12A LTR ERVK 162 266 -302 4 716 454 102 22 3 chr17 17276221 17276306 -77996345 + B1_Mm SINE Alu 30 147 0 4 716 1165 278 65 12 chr17 17276372 17276790 -77995861 + RMER10A LTR ERVL 1 440 -2 4 716 217 215 31 0 chr17 17276858 17276923 -77995728 + (TTTAA)n Simple_repeat Simple_repeat 4 70 0 4 716 732 123 0 161 chr17 17276988 17277162 -77995489 - B1_Mm SINE Alu -1 146 1 4 716 269 75 0 117 chr17 17277405 17277465 -77995186 - MusHAL1 LINE L1 -150 2562 2510 4 716 902 131 0 19 chr17 17277466 17277622 -77995029 + L1_Mus2 LINE L1 6414 6566 0 4 716 1498 119 19 26 chr17 17277630 17277898 -77994753 - MusHAL1 LINE L1 -173 2539 2274 4 716 22 56 0 0 chr17 17277934 17277970 -77994681 + AT_rich Low_complexity Low_complexity 1 36 0 4 716 909 109 59 16 chr17 17278239 17278426 -77994225 - MusHAL1 LINE L1 -441 2271 2077 4 716 289 186 0 17 chr17 17278471 17278531 -77994120 - RLTR25A LTR ERVK 0 1103 1045 4 716 1198 274 43 0 chr17 17278554 17278926 -77993725 - Lx4B LINE L1 -465 6593 6206 4 716 638 257 6 28 chr17 17278997 17279177 -77993474 - RLTR12B LTR ERVK -41 487 312 4 716 200 31 62 0 chr17 17279195 17279227 -77993424 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 716 257 363 43 36 chr17 17279257 17279397 -77993254 - B4A SINE B4 -87 205 65 4 716 4832 205 20 37 chr17 17279399 17280667 -77991984 + MurSatRep1 Unknown Unknown 311 1557 -580 4 716 209 167 0 18 chr17 17280696 17280751 -77991900 + (TCTG)n Simple_repeat Simple_repeat 3 56 0 4 716 1562 251 14 20 chr17 17280817 17281321 -77991330 + MurSatRep1 Unknown Unknown 1635 2135 -2 4 716 225 360 23 28 chr17 17281573 17281790 -77990861 + MurSatRep1 Unknown Unknown 1835 2050 -87 4 716 367 279 11 7 chr17 17281633 17281853 -77990798 + MMSAT4 Satellite Satellite 1 220 0 4 716 489 328 32 36 chr17 17281893 17283541 -77989110 + MurSatRep1 Unknown Unknown 1740 2137 0 4 716 335 294 29 18 chr17 17283478 17283784 -77988867 + MMSAT4 Satellite Satellite 1 309 0 4 716 309 332 59 4 chr17 17283824 17284096 -77988555 + Lx6 LINE L1 7147 7433 -27 4 716 1886 266 34 6 chr17 17284227 17284729 -77987922 - RMER20A LTR ERVK 0 516 1 4 716 483 237 0 0 chr17 17284958 17285076 -77987575 + L1_Mur2 LINE L1 5543 5660 -217 4 716 3328 108 44 4 chr17 17285653 17286157 -77986494 - L1_Mus1 LINE L1 0 6567 6044 4 716 2706 73 8 0 chr17 17286160 17286545 -77986106 + L1_Mus1 LINE L1 5640 6027 -539 4 716 757 185 7 20 chr17 17286636 17286785 -77985866 - B1_Mus1 SINE Alu 0 148 2 4 716 189 0 0 0 chr17 17287738 17287759 -77984892 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 716 369 75 0 0 chr17 17287759 17287812 -77984839 + (GA)n Simple_repeat Simple_repeat 2 54 0 4 716 625 337 20 41 chr17 17288029 17288422 -77984229 - Lx6 LINE L1 -17 7443 7059 4 716 1862 274 90 55 chr17 17288431 17290035 -77982616 - Lx6 LINE L1 -782 6678 4979 4 716 1070 95 125 0 chr17 17290035 17290203 -77982448 - B2_Mm1t SINE B2 -3 190 2 4 716 1608 265 97 66 chr17 17290203 17290305 -77982346 - Lx6 LINE L1 -902 4978 4881 4 716 2048 226 163 37 chr17 17290389 17291037 -77981614 + RLTR25B LTR ERVK 1 791 -312 4 716 4425 69 3 0 chr17 17291081 17291649 -77981002 - L1Md_F2 LINE L1 -8 6574 6005 4 716 563 34 57 0 chr17 17291657 17291745 -77980906 - L1Md_T LINE L1 -1 6581 6489 5 716 299 136 0 175 chr17 17291803 17291867 -77980784 + RMER3D-int LTR ERVK 9 60 -2782 5 716 1171 117 21 0 chr17 17291867 17292055 -77980596 - B2_Mm2 SINE B2 -3 192 1 5 716 299 136 0 175 chr17 17292055 17292070 -77980581 + RMER3D-int LTR ERVK 61 74 -2768 5 716 7176 129 22 22 chr17 17292087 17293339 -77979312 - Lx3_Mus LINE L1 0 7009 5758 5 716 1151 64 0 0 chr17 17293505 17293646 -77979005 + B1_Mm SINE Alu 5 145 -2 5 716 2129 193 26 16 chr17 17293667 17294173 -77978478 + RMER3D-int LTR ERVK 1023 1533 -1309 5 716 5024 77 0 7 chr17 17294246 17294925 -77977726 - L1Md_F2 LINE L1 -12 6570 5897 5 716 1208 61 0 0 chr17 17294926 17295074 -77977577 - B1_Mus1 SINE Alu 0 148 1 5 716 1004 280 12 56 chr17 17295074 17295414 -77977237 + RLTR25B LTR ERVK 779 1103 0 4 716 334 145 0 61 chr17 17295676 17295742 -77976909 + RMER3D-int LTR ERVK 9 70 -2772 4 716 1119 132 26 10 chr17 17295742 17295934 -77976717 - B2_Mm2 SINE B2 0 195 1 5 716 26 50 0 0 chr17 17295948 17295988 -77976663 + AT_rich Low_complexity Low_complexity 1 40 0 5 716 315 49 0 0 chr17 17296036 17296077 -77976574 - Lx3_Mus LINE L1 -1211 5798 5758 5 716 275 200 43 43 chr17 17296107 17296201 -77976450 + RMER3D-int LTR ERVK 680 773 -2069 4 716 1152 82 0 0 chr17 17296239 17296386 -77976265 + B1_Mm SINE Alu 1 147 0 5 716 2944 212 40 58 chr17 17296399 17297260 -77975391 + RMER3D-int LTR ERVK 1014 1858 -984 4 716 11792 60 7 10 chr17 17297319 17299563 -77973088 - L1Md_F2 LINE L1 -2 6580 4351 5 716 761 111 26 0 chr17 17299563 17299680 -77972971 - PB1D9 SINE Alu 0 120 1 5 716 11792 70 4 17 chr17 17299680 17299807 -77972844 - L1Md_F2 LINE L1 -1533 4350 4223 5 716 279 151 41 0 chr17 17299808 17299881 -77972770 + RMER3D-int LTR ERVK 1174 1249 -1077 5 716 2994 215 32 40 chr17 17299891 17300783 -77971868 + RMER3D-int LTR ERVK 1928 2812 -30 5 716 213 204 0 0 chr17 17300785 17300834 -77971817 + T-rich Low_complexity Low_complexity 5 53 0 5 716 553 67 0 0 chr17 17300838 17300913 -77971738 - B1_Mur4 SINE Alu -7 143 69 5 89 5240 97 3 1 chr17 17300918 17301641 -77971010 + L1_Mus1 LINE L1 5844 6567 0 5 717 1847 270 49 44 chr17 17301931 17302539 -77970112 + RLTR18 LTR ERVK 6 616 0 5 717 1626 244 87 5 chr17 17302581 17302993 -77969658 - ORR1A3-int LTR MaLR -1468 495 50 5 717 725 109 15 52 chr17 17303175 17303233 -77969418 + Lx3_Mus LINE L1 6369 6426 -583 5 717 6705 77 12 0 chr17 17303233 17304115 -77968536 + RLTR13B1 LTR ERVK 1 893 0 5 717 725 109 15 52 chr17 17304115 17304191 -77968460 + Lx3_Mus LINE L1 6427 6498 -511 5 717 1048 93 43 4 chr17 17304191 17304366 -77968285 - B2_Mm1t SINE B2 -2 193 20 5 717 945 107 0 26 chr17 17304418 17304572 -77968079 + B2_Mm2 SINE B2 45 194 -1 5 717 2215 25 3 34 chr17 17304625 17304920 -77967731 - RLTR10-int LTR ERVK -1686 301 16 5 717 3025 39 2 87 chr17 17304954 17305380 -77967271 - RLTR10 LTR ERVK 0 390 1 5 717 2025 225 69 14 chr17 17305380 17306308 -77966343 + Lx2B LINE L1 5304 6291 -709 5 717 753 160 0 19 chr17 17306315 17306474 -77966177 + Lx4A LINE L1 6025 6180 -878 5 717 3524 238 51 43 chr17 17306511 17307378 -77965273 + RLTR25A LTR ERVK 1 884 -219 5 717 210 37 0 0 chr17 17307378 17307405 -77965246 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 717 3524 238 51 43 chr17 17307405 17307521 -77965130 + RLTR25A LTR ERVK 885 992 -111 5 717 553 209 239 30 chr17 17307518 17307715 -77964936 + RLTR25A LTR ERVK 866 1103 0 5 717 1183 56 0 0 chr17 17308075 17308219 -77964432 + B1_Mm SINE Alu 1 144 -3 5 717 315 0 0 0 chr17 17308219 17308254 -77964397 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 5 717 31438 68 0 6 chr17 17308321 17313545 -77959106 + L1Md_F2 LINE L1 298 5589 -297 5 717 7977 54 3 0 chr17 17313545 17314538 -77958113 + L1Md_F2 LINE L1 5590 6585 0 5 717 228 200 0 0 chr17 17314996 17315056 -77957595 + CT-rich Low_complexity Low_complexity 2 61 0 5 717 942 116 0 52 chr17 17315069 17315224 -77957427 - B1_Mus2 SINE Alu 0 147 1 5 717 477 262 27 60 chr17 17315408 17315558 -77957093 + MT2A LTR ERVL 345 542 -42 5 717 23 0 0 0 chr17 17315599 17315622 -77957029 + AT_rich Low_complexity Low_complexity 1 23 0 5 717 5499 130 25 13 chr17 17316675 17316904 -77955747 - L1_Mm LINE L1 -918 4965 4736 5 717 234 0 0 0 chr17 17316904 17316930 -77955721 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 717 5499 130 25 13 chr17 17316930 17317675 -77954976 - L1_Mm LINE L1 -1148 4735 3980 5 717 26 30 0 0 chr17 17318532 17318565 -77954086 + AT_rich Low_complexity Low_complexity 1 33 0 5 717 1130 283 80 19 chr17 17318591 17319006 -77953645 + RMER10A LTR ERVL 1 440 -2 5 717 242 200 31 0 chr17 17319074 17319139 -77953512 + (TTTAA)n Simple_repeat Simple_repeat 4 70 0 5 717 10688 113 15 20 chr17 17319427 17321337 -77951314 - MusHAL1 LINE L1 -146 2566 668 5 717 431 153 0 58 chr17 17321349 17321453 -77951198 + Lx LINE L1 6551 6648 -6 5 717 2496 149 68 15 chr17 17321454 17321925 -77950726 - L1VL2 LINE L1 -5554 781 286 5 717 854 124 13 46 chr17 17322015 17322167 -77950484 - B1_Mus1 SINE Alu 0 148 2 5 717 552 15 0 0 chr17 17322334 17322399 -77950252 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 717 339 313 132 34 chr17 17322615 17322971 -77949680 - Lx6 LINE L1 -11 7449 7059 5 717 714 348 66 42 chr17 17322971 17323666 -77948985 - Lx6 LINE L1 -771 6689 5978 5 717 607 184 63 6 chr17 17323685 17323844 -77948807 - Lx5 LINE L1 -1271 5779 5612 5 717 1604 161 8 105 chr17 17323848 17323893 -77948758 - ORR1A2 LTR MaLR -8 319 287 5 717 1176 117 17 0 chr17 17323893 17324073 -77948578 - B2_Mm1t SINE B2 -8 185 3 5 717 1604 161 8 105 chr17 17324073 17324380 -77948271 - ORR1A2 LTR MaLR -41 286 1 5 717 1946 240 108 82 chr17 17324380 17325297 -77947354 - Lx5 LINE L1 -269 5611 4701 5 717 1061 95 0 13 chr17 17325297 17325447 -77947204 - B1_Mus1 SINE Alu 0 148 1 5 717 1946 240 108 82 chr17 17325447 17325667 -77946984 - Lx5 LINE L1 -1180 4700 4445 5 717 27 0 0 0 chr17 17325680 17325707 -77946944 + AT_rich Low_complexity Low_complexity 1 27 0 5 717 930 130 0 14 chr17 17325720 17325868 -77946783 - B1_Mus1 SINE Alu -1 147 2 5 717 2604 71 0 0 chr17 17325916 17326267 -77946384 - L1Md_F2 LINE L1 -232 6350 6000 5 717 1232 244 35 29 chr17 17326267 17326779 -77945872 - L1VL2 LINE L1 -5511 824 215 5 717 230 339 119 0 chr17 17327030 17327139 -77945512 + B3 SINE B2 20 141 -75 5 717 387 281 18 73 chr17 17329910 17330075 -77942576 + MT2B LTR ERVL 402 557 -44 5 717 241 301 0 40 chr17 17330081 17330163 -77942488 + A-rich Low_complexity Low_complexity 6 84 0 5 717 1029 112 0 7 chr17 17330163 17330307 -77942344 + B1_Mm SINE Alu 3 145 -2 5 717 241 301 0 40 chr17 17330307 17330373 -77942278 + A-rich Low_complexity Low_complexity 85 148 0 5 717 420 143 0 0 chr17 17330793 17330863 -77941788 + (CA)n Simple_repeat Simple_repeat 1 70 0 5 717 267 83 0 0 chr17 17330863 17330899 -77941752 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 717 323 262 138 43 chr17 17331206 17331382 -77941269 - RLTR25A LTR ERVK -7 1096 812 5 717 306 106 0 0 chr17 17331433 17331480 -77941171 + (TC)n Simple_repeat Simple_repeat 2 48 0 5 717 2987 234 111 28 chr17 17331480 17332370 -77940281 - RLTR25A LTR ERVK -136 967 4 5 717 3429 188 40 10 chr17 17332404 17332902 -77939749 - Lx4A LINE L1 -896 6162 5645 5 717 3422 118 43 27 chr17 17332902 17333457 -77939194 - LTRIS2 LTR ERV1 0 564 1 5 717 5852 179 45 34 chr17 17333457 17334053 -77938598 - Lx4A LINE L1 -233 5644 5022 5 717 1744 152 118 90 chr17 17334053 17334487 -77938164 - RLTR41 LTR ERV1 0 446 1 5 717 5852 179 45 34 chr17 17334487 17335060 -77937591 - Lx4A LINE L1 -856 5021 4466 5 717 1220 243 93 0 chr17 17335027 17335381 -77937270 - Lx4B LINE L1 -466 6592 6206 5 717 629 263 60 25 chr17 17335453 17335652 -77936999 - RLTR12B LTR ERVK -41 487 282 5 717 339 311 69 32 chr17 17335638 17335827 -77936824 + RLTR12B LTR ERVK 165 360 -168 5 717 457 65 0 0 chr17 17335809 17335871 -77936780 + B1_Mm SINE Alu 86 147 0 5 717 207 182 0 0 chr17 17335871 17335904 -77936747 + A-rich Low_complexity Low_complexity 3 35 0 5 717 1029 292 49 30 chr17 17335961 17336144 -77936507 + RMER10A LTR ERVL 27 225 -217 5 717 1568 47 11 0 chr17 17336144 17336335 -77936316 - B2_Mm1a SINE B2 0 193 1 5 717 1029 292 49 30 chr17 17336335 17336557 -77936094 + RMER10A LTR ERVL 226 440 -2 5 717 217 215 31 0 chr17 17336625 17336690 -77935961 + (TTTAA)n Simple_repeat Simple_repeat 4 70 0 5 717 725 105 0 0 chr17 17336755 17336860 -77935791 - B1_Mm SINE Alu -1 146 42 5 717 280 156 194 32 chr17 17336798 17336891 -77935760 - RLTR25B LTR ERVK -526 502 395 5 717 374 188 57 57 chr17 17336898 17337039 -77935612 + (TCTCTG)n Simple_repeat Simple_repeat 1 141 0 5 717 307 107 69 35 chr17 17337054 17337112 -77935539 - B1_Mus1 SINE Alu -88 60 1 5 717 296 199 45 81 chr17 17337112 17337171 -77935480 - B4 SINE B4 -79 132 29 5 717 360 18 0 111 chr17 17337350 17337413 -77935238 - MusHAL1 LINE L1 -147 2565 2510 5 717 880 137 0 19 chr17 17337414 17337570 -77935081 + L1_Mus2 LINE L1 6414 6566 0 5 717 205 162 0 0 chr17 17337579 17337616 -77935035 + GA-rich Low_complexity Low_complexity 2 38 0 5 717 1526 113 26 22 chr17 17337616 17337887 -77934764 - MusHAL1 LINE L1 -174 2538 2267 5 717 22 56 0 0 chr17 17337888 17337924 -77934727 + AT_rich Low_complexity Low_complexity 1 36 0 5 717 929 113 53 16 chr17 17338190 17338379 -77934272 - MusHAL1 LINE L1 -440 2272 2077 5 717 301 169 0 17 chr17 17338424 17338484 -77934167 - RLTR25A LTR ERVK 0 1103 1045 5 717 1329 245 38 0 chr17 17338511 17338878 -77933773 - Lx2B LINE L1 -413 6587 6207 5 717 557 269 6 33 chr17 17338950 17339131 -77933520 - RLTR12B LTR ERVK -41 487 312 5 717 5405 216 18 35 chr17 17339148 17340626 -77932025 + MurSatRep1 Unknown Unknown 106 1557 -580 5 717 200 185 0 18 chr17 17340655 17340710 -77931941 + (TCTG)n Simple_repeat Simple_repeat 3 56 0 5 717 1603 242 14 20 chr17 17340776 17341282 -77931369 + MurSatRep1 Unknown Unknown 1635 2137 0 5 717 510 319 37 34 chr17 17341535 17341595 -77931056 + MurSatRep1 Unknown Unknown 1740 1766 -371 5 717 373 307 7 0 chr17 17341595 17341745 -77930906 + MMSAT4 Satellite Satellite 18 168 0 5 717 510 319 37 34 chr17 17341745 17342587 -77930064 + MurSatRep1 Unknown Unknown 1767 2137 0 5 717 426 280 0 0 chr17 17342526 17342669 -77929982 + MMSAT4 Satellite Satellite 26 168 0 5 717 510 334 17 19 chr17 17342615 17343010 -77929641 + MurSatRep1 Unknown Unknown 1739 2049 -88 5 717 365 292 7 7 chr17 17342941 17343089 -77929562 + MMSAT4 Satellite Satellite 21 168 0 5 717 417 327 55 0 chr17 17343209 17343481 -77929170 + Lx6 LINE L1 7147 7433 -27 5 717 180 0 0 0 chr17 17343523 17343543 -77929108 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 717 1770 275 34 8 chr17 17343617 17344119 -77928532 - RMER20A LTR ERVK 0 516 2 5 717 397 263 0 0 chr17 17344273 17344387 -77928264 + L1_Mur2 LINE L1 5543 5656 -221 5 717 3650 100 6 0 chr17 17344974 17345493 -77927158 - L1_Mus1 LINE L1 -2 6565 6044 5 717 1897 87 15 212 chr17 17345502 17345983 -77926668 + L1Md_F2 LINE L1 5649 6034 -548 6 717 838 145 7 46 chr17 17346074 17346226 -77926425 - B1_Mus1 SINE Alu 0 148 3 6 717 1219 125 16 0 chr17 17346971 17347155 -77925496 + B2_Mm2 SINE B2 1 187 -8 6 717 477 47 0 0 chr17 17347561 17347625 -77925026 + (GA)n Simple_repeat Simple_repeat 1 64 0 6 717 727 330 15 45 chr17 17347840 17348237 -77924414 - Lx6 LINE L1 -17 7443 7059 6 717 2102 280 48 44 chr17 17348249 17350017 -77922634 - Lx6 LINE L1 -785 6675 4882 6 717 3082 44 0 3 chr17 17350053 17350419 -77922232 - RLTR10B2 LTR ERVK 0 365 1 6 717 227 229 62 0 chr17 17350457 17350505 -77922146 + RLTR25A LTR ERVK 38 88 -1015 6 717 3115 221 163 59 chr17 17350505 17351504 -77921147 + RLTR25A LTR ERVK 1 1103 0 6 717 35982 22 2 1 chr17 17351797 17357000 -77915651 + L1Md_A LINE L1 419 5586 -297 6 717 8414 33 1 0 chr17 17357000 17357995 -77914656 + L1Md_A LINE L1 5587 6582 0 6 717 296 125 0 0 chr17 17357995 17358043 -77914608 + RMER3D-int LTR ERVK 26 73 -2769 6 717 1075 111 77 6 chr17 17358043 17358224 -77914427 - B2_Mm2 SINE B2 -1 194 1 6 717 7277 130 20 11 chr17 17358255 17359495 -77913156 - Lx3_Mus LINE L1 0 7009 5758 6 717 286 83 0 40 chr17 17359525 17359575 -77913076 + RMER3D-int LTR ERVK 680 727 -2115 6 717 1083 71 7 0 chr17 17359661 17359801 -77912850 + B1_Mm SINE Alu 5 145 -2 6 717 2037 196 33 45 chr17 17359827 17360344 -77912307 + RMER3D-int LTR ERVK 1023 1533 -1309 6 717 7127 82 0 3 chr17 17360387 17361372 -77911279 - L1Md_F2 LINE L1 -14 6568 5587 6 717 452 79 0 0 chr17 17361389 17361452 -77911199 + L1Md_F2 LINE L1 5476 5538 -345 6 717 4196 210 66 36 chr17 17361475 17362716 -77909935 + RMER3D-int LTR ERVK 1541 2818 -24 6 717 186 43 0 0 chr17 17362721 17362744 -77909907 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 717 2293 92 6 0 chr17 17362763 17363078 -77909573 + L1_Mus1 LINE L1 6251 6567 0 6 717 1887 259 51 51 chr17 17363366 17363977 -77908674 + RLTR18 LTR ERVK 6 616 0 6 717 1426 249 110 2 chr17 17364023 17364422 -77908229 - ORR1A3-int LTR MaLR -1472 491 50 6 717 275 250 13 0 chr17 17364590 17364666 -77907985 - L1_Mur2 LINE L1 -689 5188 5112 6 717 2991 127 57 0 chr17 17364677 17365150 -77907501 + Lx3_Mus LINE L1 6510 7009 0 6 717 30 27 0 0 chr17 17365150 17365187 -77907464 + AT_rich Low_complexity Low_complexity 1 37 0 6 717 1173 100 0 0 chr17 17365236 17365406 -77907245 + (TC)n Simple_repeat Simple_repeat 1 170 0 6 717 792 135 50 0 chr17 17365408 17365549 -77907102 - B1_Mus1 SINE Alu 0 148 1 6 717 1379 187 6 44 chr17 17365693 17366057 -77906594 + Lx4B LINE L1 1905 2254 -3623 6 717 854 142 11 71 chr17 17366143 17366325 -77906326 + B2_Mm2 SINE B2 25 195 0 6 717 2210 227 75 7 chr17 17366343 17367320 -77905331 + Lx4B LINE L1 5278 6318 -740 6 717 755 143 0 19 chr17 17367306 17367463 -77905188 + Lx4B LINE L1 6025 6178 -880 6 717 4023 222 51 71 chr17 17367502 17367784 -77904867 + RLTR25A LTR ERVK 1 297 -806 6 717 2712 47 0 141 chr17 17367784 17368209 -77904442 - RLTR10B2 LTR ERVK 0 365 1 6 717 4023 222 51 71 chr17 17368209 17368750 -77903901 + RLTR25A LTR ERVK 298 812 -291 6 717 4252 51 74 0 chr17 17368750 17369275 -77903376 + LTRIS2 LTR ERV1 1 564 0 6 717 4023 222 51 71 chr17 17369275 17369348 -77903303 + RLTR25A LTR ERVK 813 884 -219 6 717 191 36 36 0 chr17 17369348 17369376 -77903275 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 717 501 17 0 0 chr17 17369376 17369433 -77903218 + (GA)n Simple_repeat Simple_repeat 2 59 0 6 717 4023 222 51 71 chr17 17369433 17369659 -77902992 + RLTR25A LTR ERVK 885 1102 -1 6 717 207 0 0 0 chr17 17370568 17370591 -77902060 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 6 717 1053 84 0 27 chr17 17370596 17370743 -77901908 - B1_Mus2 SINE Alu -4 143 1 6 717 461 234 27 60 chr17 17370928 17371078 -77901573 + MT2B2 LTR ERVL 398 542 -42 6 717 22 35 0 0 chr17 17371113 17371142 -77901509 + AT_rich Low_complexity Low_complexity 1 29 0 6 717 5326 129 33 25 chr17 17372246 17373228 -77899423 - L1_Mm LINE L1 -915 4968 3980 6 717 252 77 0 0 chr17 17373605 17373644 -77899007 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 6 717 28 48 0 0 chr17 17374078 17374120 -77898531 + AT_rich Low_complexity Low_complexity 1 42 0 6 717 1119 287 80 19 chr17 17374146 17374561 -77898090 + RMER10A LTR ERVL 1 440 -2 6 717 182 111 62 31 chr17 17374629 17374694 -77897957 + (TTTAA)n Simple_repeat Simple_repeat 4 70 0 6 717 10865 104 21 22 chr17 17374984 17375257 -77897394 - MusHAL1 LINE L1 -146 2566 2276 6 717 243 0 0 0 chr17 17375257 17375284 -77897367 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 717 10865 104 21 22 chr17 17375284 17376910 -77895741 - MusHAL1 LINE L1 -437 2275 669 6 717 445 122 0 58 chr17 17376922 17377026 -77895625 + Lx LINE L1 6551 6648 -6 6 717 2578 151 63 15 chr17 17377027 17377503 -77895148 - L1VL2 LINE L1 -5554 781 283 6 717 833 131 13 58 chr17 17377586 17377740 -77894911 - B1_Mus1 SINE Alu 0 148 2 6 717 396 0 0 0 chr17 17377901 17377945 -77894706 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 717 248 258 11 0 chr17 17378167 17378256 -77894395 - Lx6 LINE L1 -11 7449 7360 6 717 2540 168 52 10 chr17 17378256 17378738 -77893913 - RLTR44C LTR ERVK 0 502 1 6 717 898 347 65 10 chr17 17378998 17379723 -77892928 - Lx6 LINE L1 -771 6689 5925 6 717 509 212 49 24 chr17 17379723 17379887 -77892764 - Lx5 LINE L1 -1271 5779 5612 6 717 1684 149 8 105 chr17 17379891 17379936 -77892715 - ORR1A2 LTR MaLR -8 319 287 6 717 1282 78 16 11 chr17 17379936 17380118 -77892533 - B2_Mm1a SINE B2 -8 185 3 6 717 1684 149 8 105 chr17 17380118 17380425 -77892226 - ORR1A2 LTR MaLR -41 286 1 6 717 1872 239 102 119 chr17 17380425 17381346 -77891305 - Lx5 LINE L1 -269 5611 4722 6 717 1052 76 28 7 chr17 17381346 17381491 -77891160 - B1_Mus1 SINE Alu 0 148 1 6 717 1872 239 102 119 chr17 17381491 17381786 -77890865 - Lx5 LINE L1 -1159 4721 4434 6 717 1126 75 0 13 chr17 17381786 17381935 -77890716 - B1_Mus1 SINE Alu 0 148 2 6 717 1872 239 102 119 chr17 17381935 17382077 -77890574 - Lx5 LINE L1 -1447 4433 4276 6 717 279 0 0 0 chr17 17382077 17382108 -77890543 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 6 717 1872 239 102 119 chr17 17382108 17382246 -77890405 - Lx5 LINE L1 -1605 4275 4140 6 717 339 316 38 34 chr17 17382289 17382355 -77890296 - L1Md_Gf LINE L1 -5442 1080 1012 6 717 3953 79 14 17 chr17 17382355 17382935 -77889716 - L1Md_F2 LINE L1 -5 6577 6000 6 717 848 201 0 5 chr17 17382935 17383120 -77889531 - L1VL4 LINE L1 -5534 768 585 6 717 195 69 0 0 chr17 17383121 17383150 -77889501 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 717 12478 53 433 19 chr17 17383269 17387460 -77885191 - L1Md_F2 LINE L1 -1 6581 659 6 717 317 258 52 63 chr17 17387465 17387639 -77885012 - L1VL2 LINE L1 -5721 614 443 6 717 204 111 0 0 chr17 17387911 17387947 -77884704 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 717 1134 65 0 0 chr17 17388010 17388148 -77884503 + B1_Mus2 SINE Alu 1 138 -9 6 717 183 42 0 0 chr17 17388148 17388172 -77884479 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 717 243 352 102 0 chr17 17388221 17388329 -77884322 + B3A SINE B2 25 143 -55 6 717 1422 184 92 0 chr17 17388448 17388741 -77883910 - IAPEY3_LTR LTR ERVK -12 320 1 6 717 411 294 12 67 chr17 17391415 17391579 -77881072 + MT2B LTR ERVL 403 557 -44 6 717 21 57 0 0 chr17 17391585 17391620 -77881031 + AT_rich Low_complexity Low_complexity 1 35 0 6 717 1027 119 0 0 chr17 17391667 17391810 -77880841 + B1_Mm SINE Alu 3 145 -2 6 717 4111 53 0 4 chr17 17391838 17392345 -77880306 + L1Md_F3 LINE L1 6065 6569 -15 6 717 258 81 0 0 chr17 17392804 17392841 -77879810 + (TA)n Simple_repeat Simple_repeat 1 37 0 6 717 478 241 138 69 chr17 17393147 17393379 -77879272 - RLTR25B LTR ERVK 0 1103 856 6 717 2654 227 59 67 chr17 17393414 17394208 -77878443 - RLTR25B LTR ERVK -235 793 6 6 717 3420 204 15 19 chr17 17394238 17394744 -77877907 - Lx4A LINE L1 -888 6170 5656 6 717 3409 126 44 11 chr17 17394744 17395290 -77877361 - LTRIS2 LTR ERV1 0 564 1 6 717 3750 138 3 61 chr17 17395290 17396278 -77876373 - Lx4A LINE L1 -222 5655 4823 6 717 7537 88 8 0 chr17 17396274 17397382 -77875269 + L1_Mm LINE L1 2600 3716 -2167 6 717 1521 128 20 0 chr17 17397405 17397655 -77874996 - MusHAL1 LINE L1 -183 2529 2275 6 717 23 33 0 0 chr17 17397683 17397713 -77874938 + AT_rich Low_complexity Low_complexity 1 30 0 6 717 886 124 53 16 chr17 17397979 17398168 -77874483 - MusHAL1 LINE L1 -440 2272 2077 6 717 285 203 0 17 chr17 17398213 17398273 -77874378 - RLTR25A LTR ERVK 0 1103 1045 6 717 1300 251 38 0 chr17 17398300 17398667 -77873984 - Lx2B LINE L1 -413 6587 6207 6 717 592 257 6 33 chr17 17398739 17398920 -77873731 - RLTR12B LTR ERVK -41 487 312 6 717 215 31 31 0 chr17 17398937 17398969 -77873682 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 6 717 5382 215 18 33 chr17 17398971 17400408 -77872243 + MurSatRep1 Unknown Unknown 142 1557 -580 6 717 200 186 0 17 chr17 17400442 17400502 -77872149 + (TCTG)n Simple_repeat Simple_repeat 3 61 0 6 717 1723 243 10 20 chr17 17400568 17401076 -77871575 + MurSatRep1 Unknown Unknown 1635 2137 0 6 717 481 324 35 28 chr17 17401329 17401386 -77871265 + MurSatRep1 Unknown Unknown 1740 1759 -378 6 717 469 281 3 0 chr17 17401386 17401621 -77871030 + MMSAT4 Satellite Satellite 1 235 0 6 717 481 324 35 28 chr17 17401621 17402723 -77869928 + MurSatRep1 Unknown Unknown 1760 2137 0 6 717 403 284 0 0 chr17 17402660 17402801 -77869850 + MMSAT4 Satellite Satellite 27 167 -1 6 717 384 320 49 21 chr17 17402771 17403055 -77869596 + MurSatRep1 Unknown Unknown 1845 2136 -1 6 717 351 320 66 11 chr17 17403161 17403433 -77869218 + Lx6 LINE L1 7147 7433 -27 6 717 1771 275 34 6 chr17 17403561 17404058 -77868593 - RMER20A LTR ERVK -5 511 1 6 717 452 246 0 0 chr17 17404283 17404401 -77868250 + L1_Mur2 LINE L1 5543 5660 -217 6 717 3677 103 4 4 chr17 17404999 17405523 -77867128 - L1_Mus1 LINE L1 0 6567 6044 6 717 2783 60 16 0 chr17 17405526 17405908 -77866743 + L1_Mus1 LINE L1 5640 6027 -539 6 717 754 154 27 47 chr17 17405999 17406149 -77866502 - B1_Mus1 SINE Alu 0 148 2 6 717 21 82 0 0 chr17 17406413 17406462 -77866189 + AT_rich Low_complexity Low_complexity 1 49 0 6 717 1317 98 16 0 chr17 17406894 17407078 -77865573 + B2_Mm2 SINE B2 1 187 -8 6 717 1466 60 32 0 chr17 17407723 17407908 -77864743 + B2_Mm1a SINE B2 1 191 -2 6 717 653 338 15 45 chr17 17407923 17408320 -77864331 - Lx6 LINE L1 -17 7443 7059 6 717 1843 274 87 61 chr17 17408329 17409951 -77862700 - Lx6 LINE L1 -782 6678 4981 6 717 1391 62 6 6 chr17 17409951 17410129 -77862522 - B2_Mm1t SINE B2 -14 179 2 6 717 1686 259 92 79 chr17 17410129 17410231 -77862420 - Lx6 LINE L1 -900 4980 4881 6 717 229 263 90 26 chr17 17410237 17410315 -77862336 + RLTR25A LTR ERVK 6 88 -1015 6 717 2111 219 82 55 chr17 17410315 17410913 -77861738 + RLTR25B LTR ERVK 1 614 -414 6 717 271 185 0 0 chr17 17410909 17410963 -77861688 + RLTR25B LTR ERVK 738 791 -312 6 717 4987 80 6 3 chr17 17411007 17411681 -77860970 - L1Md_F2 LINE L1 -8 6574 5899 6 717 1079 72 0 0 chr17 17411684 17411823 -77860828 - B1_Mus1 SINE Alu 0 148 10 6 717 897 259 51 67 chr17 17411827 17411872 -77860779 + RLTR25B LTR ERVK 778 820 -283 6 717 2246 78 3 48 chr17 17411872 17412207 -77860444 - RLTRETN_Mm LTR ERVK -2 320 1 7 717 897 259 51 67 chr17 17412207 17412275 -77860376 + RLTR25B LTR ERVK 821 896 -207 6 717 336 83 0 0 chr17 17412275 17412323 -77860328 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 717 897 259 51 67 chr17 17412323 17412539 -77860112 + RLTR25B LTR ERVK 897 1103 0 6 717 312 154 0 0 chr17 17412803 17412855 -77859796 + RMER3D-int LTR ERVK 9 60 -2782 6 717 855 149 0 31 chr17 17412856 17412888 -77859763 - B2_Mm2 SINE B2 -12 183 155 7 717 450 0 0 0 chr17 17412888 17412938 -77859713 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 7 717 855 149 0 31 chr17 17412938 17413064 -77859587 - B2_Mm2 SINE B2 -41 154 30 7 717 4431 16 0 0 chr17 17413064 17413557 -77859094 - MT2_Mm LTR ERVL 0 493 1 7 717 302 0 0 0 chr17 17413557 17413595 -77859056 - MERVL_2A-int LTR ERVL 0 5485 5448 7 717 383 167 46 35 chr17 17413595 17413682 -77858969 - ORR1A3-int LTR MaLR -1323 640 553 7 717 33143 96 1 0 chr17 17413689 17418255 -77854396 - MERVL_2A-int LTR ERVL -308 5453 886 7 717 6093 13 0 0 chr17 17418255 17418969 -77853682 - MERVL_2A-int LTR ERVL -4771 714 1 7 717 4431 16 0 0 chr17 17418969 17419462 -77853189 - MT2_Mm LTR ERVL 0 493 1 7 717 7355 133 14 14 chr17 17419527 17420780 -77851871 - Lx3_Mus LINE L1 0 7009 5758 7 717 273 216 37 47 chr17 17420809 17420916 -77851735 + RMER3D-int LTR ERVK 680 785 -2057 6 717 1143 130 10 49 chr17 17420943 17421104 -77851547 + B2_Mm2 SINE B2 1 161 -34 7 717 189 0 0 0 chr17 17421104 17421125 -77851526 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 7 717 1143 130 10 49 chr17 17421125 17421151 -77851500 + B2_Mm2 SINE B2 162 182 -13 7 717 1146 77 0 0 chr17 17421151 17421294 -77851357 + B1_Mm SINE Alu 1 143 -4 7 717 1143 130 10 49 chr17 17421294 17421308 -77851343 + B2_Mm2 SINE B2 183 195 0 7 717 2234 194 24 16 chr17 17421322 17421829 -77850822 + RMER3D-int LTR ERVK 1023 1533 -1309 6 717 6825 91 6 2 chr17 17421861 17422849 -77849802 - L1Md_F2 LINE L1 -3 6579 5588 7 717 466 104 0 0 chr17 17422866 17422933 -77849718 + L1Md_F2 LINE L1 5475 5541 -342 7 717 576 248 13 13 chr17 17422950 17423105 -77849546 + RMER3D-int LTR ERVK 1539 1693 -1149 6 717 291 71 0 0 chr17 17423130 17423172 -77849479 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 7 717 19306 50 0 0 chr17 17423172 17425697 -77846954 + L1Md_F3 LINE L1 3061 5586 -297 7 717 8112 37 5 1 chr17 17425697 17426674 -77845977 + L1Md_F3 LINE L1 5587 6567 -17 7 717 301 73 0 18 chr17 17426685 17426741 -77845910 + B2_Mm2 SINE B2 134 188 -7 7 717 21 0 0 0 chr17 17426757 17426778 -77845873 + AT_rich Low_complexity Low_complexity 1 21 0 7 717 2279 219 79 10 chr17 17426791 17427751 -77844900 + Lx4B LINE L1 5304 6324 -734 7 717 760 148 0 19 chr17 17427732 17427891 -77844760 + Lx4B LINE L1 6025 6180 -878 7 717 3826 217 48 45 chr17 17427928 17428800 -77843851 + RLTR25A LTR ERVK 1 883 -220 7 717 450 0 0 0 chr17 17428800 17428850 -77843801 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 717 3826 217 48 45 chr17 17428850 17428941 -77843710 + RLTR25A LTR ERVK 884 967 -136 7 717 249 33 0 0 chr17 17428941 17428971 -77843680 + (GA)n Simple_repeat Simple_repeat 2 31 0 7 717 573 226 192 42 chr17 17428971 17429211 -77843440 + RLTR25A LTR ERVK 753 1103 0 7 717 189 178 0 0 chr17 17430084 17430129 -77842522 + CT-rich Low_complexity Low_complexity 2 46 0 7 717 1003 91 0 34 chr17 17430151 17430299 -77842352 - B1_Mus2 SINE Alu -4 143 1 7 717 475 262 27 60 chr17 17430480 17430630 -77842021 + MT2A LTR ERVL 347 542 -42 7 717 21 36 0 0 chr17 17430665 17430693 -77841958 + AT_rich Low_complexity Low_complexity 1 28 0 7 718 10892 116 14 17 chr17 17432607 17435211 -77837440 - L1_Mus2 LINE L1 -3 6563 3980 7 718 306 0 0 0 chr17 17435610 17435644 -77837007 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 7 718 26 30 0 0 chr17 17436169 17436202 -77836449 + AT_rich Low_complexity Low_complexity 1 33 0 7 718 1033 284 73 33 chr17 17436228 17436651 -77836000 + RMER10A LTR ERVL 1 440 -2 7 718 185 140 0 23 chr17 17436741 17436785 -77835866 + (TTTAA)n Simple_repeat Simple_repeat 4 46 0 7 718 11162 106 14 20 chr17 17437074 17437354 -77835297 - MusHAL1 LINE L1 -147 2565 2276 7 718 270 0 0 0 chr17 17437354 17437384 -77835267 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 7 718 11162 106 14 20 chr17 17437384 17439013 -77833638 - MusHAL1 LINE L1 -437 2275 669 7 718 441 122 0 58 chr17 17439024 17439128 -77833523 + Lx LINE L1 6550 6647 -7 7 718 2476 154 67 21 chr17 17439129 17439606 -77833045 - L1VL2 LINE L1 -5554 781 283 7 718 1007 109 7 7 chr17 17439682 17439829 -77832822 - B1_Mus1 SINE Alu 0 148 2 7 718 228 236 34 0 chr17 17440229 17440318 -77832333 - Lx6 LINE L1 -11 7449 7358 7 718 2604 155 50 10 chr17 17440318 17440801 -77831850 - RLTR44C LTR ERVK 0 502 1 7 718 1233 41 0 0 chr17 17440945 17441091 -77831560 + B1_Mm SINE Alu 2 147 0 7 718 836 340 81 17 chr17 17441232 17441951 -77830700 - Lx6 LINE L1 -771 6689 5925 7 718 564 196 63 6 chr17 17441951 17442110 -77830541 - Lx5 LINE L1 -1271 5779 5612 7 718 1723 155 9 68 chr17 17442114 17442165 -77830486 - ORR1A2 LTR MaLR -8 319 287 7 718 1322 64 17 0 chr17 17442165 17442337 -77830314 - B2_Mm1a SINE B2 -16 177 3 7 718 1723 155 9 68 chr17 17442337 17442624 -77830027 - ORR1A2 LTR MaLR -41 286 1 7 718 1504 240 81 64 chr17 17442624 17443393 -77829258 - Lx5 LINE L1 -269 5611 4830 7 718 228 232 143 0 chr17 17443408 17443520 -77829131 - L1_Mur1 LINE L1 -1018 4868 4741 7 718 306 98 0 0 chr17 17443535 17443586 -77829065 + (TATG)n Simple_repeat Simple_repeat 2 52 0 7 718 954 117 7 14 chr17 17443586 17443724 -77828927 - B1_Mus1 SINE Alu -8 140 2 7 718 514 231 56 133 chr17 17443728 17444052 -77828599 - Lx5 LINE L1 -1448 4432 4134 7 718 646 255 14 133 chr17 17444053 17444176 -77828475 - L1_Mur1 LINE L1 -5787 1195 1120 7 718 4060 87 2 10 chr17 17444176 17444754 -77827897 - L1Md_F2 LINE L1 -10 6572 6000 7 718 1257 233 21 29 chr17 17444754 17445139 -77827512 - L1VL2 LINE L1 -5511 824 443 7 718 1132 56 0 14 chr17 17445502 17445647 -77827004 + B1_Mus2 SINE Alu 1 143 -4 7 718 11923 53 1 0 chr17 17445926 17447878 -77824773 + L1Md_F2 LINE L1 4328 6280 -302 7 718 2703 229 122 70 chr17 17447954 17448185 -77824466 - RLTR25B LTR ERVK 0 1103 854 7 718 1277 73 0 6 chr17 17448185 17448364 -77824287 + (TCTCCC)n Simple_repeat Simple_repeat 3 180 0 7 718 2703 224 88 60 chr17 17448364 17448384 -77824267 - RLTR25B LTR ERVK -175 853 822 7 718 321 93 0 0 chr17 17448384 17448438 -77824213 + (TCTG)n Simple_repeat Simple_repeat 1 54 0 7 718 2703 224 88 60 chr17 17448438 17449249 -77823402 - RLTR25B LTR ERVK -207 821 5 7 718 5902 187 37 12 chr17 17449274 17449790 -77822861 - Lx4A LINE L1 -879 6179 5646 7 718 3473 118 40 16 chr17 17449790 17450340 -77822311 - LTRIS2 LTR ERV1 -1 563 1 7 718 5902 174 53 14 chr17 17450340 17450944 -77821707 - Lx4A LINE L1 -232 5645 5023 7 718 1659 166 128 93 chr17 17450944 17451375 -77821276 - RLTR41 LTR ERV1 0 446 1 7 718 5902 174 53 14 chr17 17451375 17451742 -77820909 - Lx4A LINE L1 -855 5022 4639 7 718 198 0 0 0 chr17 17451742 17451764 -77820887 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 7 718 5902 174 53 14 chr17 17451764 17451900 -77820751 - Lx4A LINE L1 -1239 4638 4493 7 718 1209 244 96 0 chr17 17451893 17452246 -77820405 - Lx4B LINE L1 -466 6592 6206 7 718 631 263 6 11 chr17 17452317 17452494 -77820157 - RLTR12B LTR ERVK -41 487 312 7 718 288 0 0 0 chr17 17452511 17452543 -77820108 + (TTG)n Simple_repeat Simple_repeat 2 33 0 7 718 5464 214 23 32 chr17 17452566 17454023 -77818628 + MurSatRep1 Unknown Unknown 137 1580 -557 7 718 224 131 0 21 chr17 17454031 17454078 -77818573 + (TCTG)n Simple_repeat Simple_repeat 3 48 0 7 718 669 254 9 18 chr17 17454138 17454355 -77818296 + MurSatRep1 Unknown Unknown 1635 1849 -288 7 718 990 39 16 0 chr17 17454355 17454483 -77818168 - B1_Mm SINE Alu -5 142 13 7 718 1015 232 17 20 chr17 17454483 17454778 -77817873 + MurSatRep1 Unknown Unknown 1844 2137 0 7 718 316 293 14 14 chr17 17455099 17455241 -77817410 + MMSAT4 Satellite Satellite 27 168 0 7 718 474 320 20 22 chr17 17455195 17455843 -77816808 + MurSatRep1 Unknown Unknown 1746 2055 -82 7 718 369 283 7 7 chr17 17455777 17455916 -77816735 + MMSAT4 Satellite Satellite 30 168 0 7 718 342 307 60 31 chr17 17455885 17456110 -77816541 + MurSatRep1 Unknown Unknown 1751 2132 0 7 718 360 271 68 0 chr17 17456110 17456243 -77816408 + MMSAT4 Satellite Satellite 27 168 0 7 718 333 311 25 25 chr17 17456219 17456417 -77816234 + MurSatRep1 Unknown Unknown 1852 2049 -88 7 718 321 284 37 22 chr17 17456353 17456576 -77816075 + MMSAT4 Satellite Satellite 1 226 -7 7 718 389 307 67 4 chr17 17456616 17456871 -77815780 + Lx6 LINE L1 7147 7417 -43 7 718 1860 269 34 6 chr17 17457021 17457523 -77815128 - RMER20A LTR ERVK 0 516 1 7 718 24 0 0 0 chr17 17457662 17457686 -77814965 + AT_rich Low_complexity Low_complexity 1 24 0 7 718 422 263 0 0 chr17 17457749 17457867 -77814784 + L1_Mur2 LINE L1 5543 5660 -217 7 718 3788 97 0 2 chr17 17458450 17458975 -77813676 - L1_Mus1 LINE L1 0 6567 6044 7 718 2589 76 16 0 chr17 17458978 17459360 -77813291 + L1_Mus1 LINE L1 5640 6027 -539 7 718 798 163 0 41 chr17 17459428 17459575 -77813076 - B1_Mus1 SINE Alu -6 142 2 7 718 1274 100 39 0 chr17 17460326 17460506 -77812145 + B2_Mm2 SINE B2 1 187 -8 7 718 387 0 0 0 chr17 17460898 17460941 -77811710 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 718 629 330 23 50 chr17 17461156 17461552 -77811099 - Lx6 LINE L1 -17 7443 7059 7 718 2361 278 43 45 chr17 17461561 17462849 -77809802 - Lx6 LINE L1 -782 6678 5382 7 718 2741 100 31 3 chr17 17462849 17463241 -77809410 - RLTR9D LTR ERVK 0 403 1 7 718 2070 270 37 50 chr17 17463241 17463356 -77809295 - Lx6 LINE L1 -499 5381 5267 7 718 213 39 0 0 chr17 17463356 17463382 -77809269 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 7 718 2070 270 37 50 chr17 17463382 17463705 -77808946 - Lx6 LINE L1 -614 5266 4939 7 718 3072 225 115 57 chr17 17463819 17464431 -77808220 + RLTR25B LTR ERVK 11 662 -366 7 718 7517 43 15 34 chr17 17464431 17465428 -77807223 + RLTR13A3 LTR ERVK 1 978 0 7 718 3072 225 115 57 chr17 17465428 17465563 -77807088 + RLTR25B LTR ERVK 663 820 -208 7 718 423 0 0 0 chr17 17465563 17465610 -77807041 + (TC)n Simple_repeat Simple_repeat 1 47 0 7 718 270 0 0 0 chr17 17465610 17465639 -77807012 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 718 3072 225 115 57 chr17 17465639 17465851 -77806800 + RLTR25B LTR ERVK 821 1026 -2 7 718 327 265 42 28 chr17 17465851 17466009 -77806642 - Lx6 LINE L1 -1000 4880 4713 7 718 542 113 38 0 chr17 17466036 17466142 -77806509 + CT-rich Low_complexity Low_complexity 1 110 0 7 718 536 308 76 11 chr17 17466148 17466332 -77806319 - B3 SINE B2 -19 197 2 7 718 1694 230 132 94 chr17 17466403 17466539 -77806112 - RLTR18 LTR ERVK -2 614 491 7 718 1264 73 45 0 chr17 17466539 17466718 -77805933 - B2_Mm2 SINE B2 -7 188 2 7 718 1694 230 132 94 chr17 17466718 17467156 -77805495 - RLTR18 LTR ERVK -126 490 18 7 718 352 335 106 5 chr17 17467474 17467663 -77804988 + B3 SINE B2 3 210 -6 7 718 546 325 43 31 chr17 17468471 17468797 -77803854 + MT2B LTR ERVL 266 546 -55 7 718 1009 143 6 12 chr17 17471000 17471163 -77801488 - B2_Mm2 SINE B2 -33 162 1 7 718 8692 106 12 19 chr17 17471191 17472623 -77800028 - Lx3_Mus LINE L1 -1 7008 5587 7 718 4070 146 25 71 chr17 17472619 17473986 -77798665 + L1_Mur2 LINE L1 4028 5273 -607 7 718 3586 107 37 12 chr17 17473983 17474200 -77798451 - L1_Mur2 LINE L1 -3604 2273 2051 7 718 399 83 0 0 chr17 17474200 17474260 -77798391 + (TG)n Simple_repeat Simple_repeat 1 60 0 7 718 3586 107 37 12 chr17 17474260 17474696 -77797955 - L1_Mur2 LINE L1 -3827 2050 1604 7 718 5161 189 7 23 chr17 17474695 17475309 -77797342 + L1_Mur2 LINE L1 4641 5246 -631 7 718 3977 138 18 47 chr17 17475309 17475987 -77796664 + Lx4A LINE L1 6401 7058 0 7 718 5161 189 7 23 chr17 17475987 17476508 -77796143 + L1_Mur2 LINE L1 5247 5758 -119 7 718 839 243 25 32 chr17 17476696 17477040 -77795611 + L1_Mur1 LINE L1 720 1060 -5924 7 718 2265 62 3 97 chr17 17477040 17477076 -77795575 - ORR1A0 LTR MaLR -8 338 303 7 718 556 97 0 0 chr17 17477076 17477169 -77795482 + L1Md_F2 LINE L1 6489 6581 -1 7 718 2265 62 3 97 chr17 17477169 17477505 -77795146 - ORR1A0 LTR MaLR -44 302 1 7 718 3265 168 2 1 chr17 17477506 17477802 -77794849 + L1_Mur1 LINE L1 1053 1346 -4531 7 718 1128 128 0 0 chr17 17477802 17477981 -77794670 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 7 718 3265 186 133 43 chr17 17477981 17478841 -77793810 + L1_Mur1 LINE L1 1347 2300 -3577 7 718 5001 166 54 4 chr17 17478853 17479754 -77792897 + Lx2B LINE L1 6054 6999 -1 8 718 1479 169 47 23 chr17 17479756 17480280 -77792371 - L1_Mur3 LINE L1 -4342 1538 1006 8 718 458 307 0 46 chr17 17480374 17480548 -77792103 - RMER13A LTR ERVK -600 260 95 8 718 2957 24 0 0 chr17 17480597 17480934 -77791717 - IAPLTR1a_Mm LTR ERVK 0 337 1 8 718 4347 63 50 81 chr17 17481055 17481117 -77791534 - L1VL2 LINE L1 -732 2883 2843 8 718 1144 55 7 0 chr17 17481117 17481263 -77791388 - B1_Mus1 SINE Alu 0 148 2 8 718 4347 63 50 81 chr17 17481263 17481719 -77790932 - L1VL2 LINE L1 -773 2842 2414 8 718 1195 68 0 0 chr17 17481719 17481866 -77790785 - B1_Mus1 SINE Alu 0 148 2 8 718 4347 63 50 81 chr17 17481866 17482099 -77790552 - L1VL2 LINE L1 -1202 2413 2154 8 718 369 0 0 0 chr17 17482099 17482140 -77790511 + (T)n Simple_repeat Simple_repeat 1 41 0 8 718 7568 79 10 75 chr17 17483185 17483556 -77789095 - L1VL2 LINE L1 -1445 2170 1809 8 718 1117 69 14 0 chr17 17483556 17483700 -77788951 + B1_Mus2 SINE Alu 2 147 0 8 718 7568 95 15 44 chr17 17483700 17485418 -77787233 - L1VL2 LINE L1 -1807 1808 153 8 718 2816 232 80 28 chr17 17485420 17486269 -77786382 - L1_Mur3 LINE L1 -6710 1002 110 8 718 234 265 89 56 chr17 17486305 17486485 -77786166 + L1MEc LINE L1 1152 1337 -5063 8 718 299 59 38 45 chr17 17486490 17486555 -77786096 + B1_Mur4 SINE Alu 85 150 0 8 718 271 48 31 46 chr17 17486556 17486621 -77786030 + (CAAAAA)n Simple_repeat Simple_repeat 3 66 0 8 718 984 303 29 60 chr17 17487599 17488115 -77784536 + Lx9 LINE L1 6848 7347 -297 8 718 614 186 286 0 chr17 17488280 17488441 -77784210 + B3 SINE B2 2 208 -8 8 718 2976 54 0 0 chr17 17488516 17488885 -77783766 + L1_Mus1 LINE L1 6199 6567 0 8 718 2216 196 29 7 chr17 17489023 17489433 -77783218 - MTC LTR MaLR 0 421 3 8 718 299 361 10 10 chr17 17489498 17489596 -77783055 + L2b LINE L2 3228 3325 -50 8 718 21 36 0 0 chr17 17490045 17490073 -77782578 + AT_rich Low_complexity Low_complexity 1 28 0 8 718 245 243 63 126 chr17 17490604 17490731 -77781920 + MT2B2 LTR ERVL 134 252 -332 8 718 399 247 40 40 chr17 17490648 17490749 -77781902 + PB1 SINE Alu 25 125 -2 8 718 21 0 0 0 chr17 17491928 17491949 -77780702 + AT_rich Low_complexity Low_complexity 1 21 0 8 718 484 327 0 167 chr17 17492079 17492318 -77780333 + MER20 DNA MER1_type 20 218 -1 8 718 1111 251 93 61 chr17 17492323 17492667 -77779984 - ORR1E LTR MaLR -2 357 3 8 718 189 0 0 0 chr17 17493084 17493105 -77779546 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 8 718 2210 50 7 0 chr17 17493175 17493452 -77779199 + L1_Mus1 LINE L1 6289 6567 0 8 718 3247 62 0 2 chr17 17493622 17494023 -77778628 - MTB LTR MaLR 0 400 1 8 718 225 0 0 0 chr17 17494454 17494479 -77778172 + (CA)n Simple_repeat Simple_repeat 2 26 0 8 718 1224 48 0 0 chr17 17494708 17494855 -77777796 + B1_Mus2 SINE Alu 1 147 0 8 718 269 344 186 20 chr17 17494950 17495149 -77777502 - B4 SINE B4 -11 281 50 8 718 582 204 105 7 chr17 17495228 17495371 -77777280 - Lx9 LINE L1 -423 7221 7065 8 718 731 201 0 28 chr17 17495392 17495535 -77777116 - B1_Mus2 SINE Alu 0 147 9 8 718 262 260 34 121 chr17 17495423 17495572 -77777079 - MT2B LTR ERVL -323 278 143 8 718 1309 152 21 34 chr17 17495572 17495811 -77776840 - Lx9 LINE L1 -638 7006 6771 8 718 256 228 18 0 chr17 17495807 17495864 -77776787 + Lx9 LINE L1 7193 7250 -394 8 718 4007 141 14 10 chr17 17495863 17495931 -77776720 + L1_Mus4 LINE L1 5184 5251 -632 8 718 1517 58 16 0 chr17 17495931 17496121 -77776530 + B2_Mm2 SINE B2 1 193 -2 8 718 7337 90 15 6 chr17 17496121 17497496 -77775155 + L1_Mus4 LINE L1 5252 6632 -4 8 718 1437 153 164 20 chr17 17497510 17497863 -77774788 + Lx9 LINE L1 7235 7638 -6 8 718 25 51 0 0 chr17 17497863 17497902 -77774749 + AT_rich Low_complexity Low_complexity 1 39 0 8 718 268 270 34 0 chr17 17497905 17497994 -77774657 + L2 LINE L2 2794 2885 -534 8 718 285 320 21 0 chr17 17498115 17498212 -77774439 - MIR SINE MIR -25 237 139 8 718 2020 165 40 32 chr17 17498511 17498538 -77774113 + ORR1C1 LTR MaLR 1 23 -355 8 718 3243 46 5 2 chr17 17498538 17498933 -77773718 - MTA_Mm LTR MaLR 0 396 1 8 718 2020 165 40 32 chr17 17498933 17499280 -77773371 + ORR1C1 LTR MaLR 24 378 0 8 718 1028 83 7 40 chr17 17499667 17499817 -77772834 + B1_Mus1 SINE Alu 2 146 -2 8 718 699 99 0 0 chr17 17499821 17499922 -77772729 + (GA)n Simple_repeat Simple_repeat 2 102 0 8 718 1121 97 0 0 chr17 17500191 17500336 -77772315 - B1_Mus1 SINE Alu -3 145 1 1 718 507 282 86 29 chr17 17500360 17500605 -77772046 - L1M4 LINE L1 -1861 4285 4027 2 718 7672 176 123 30 chr17 17500940 17501689 -77770962 + L1_Mur3 LINE L1 3291 4025 -1855 3 718 1389 83 0 15 chr17 17501689 17501884 -77770767 + B2_Mm2 SINE B2 1 192 -3 4 718 7672 176 123 30 chr17 17501884 17503231 -77769420 + L1_Mur3 LINE L1 4026 5581 -299 3 718 7433 60 35 5 chr17 17503232 17504198 -77768453 + L1Md_F2 LINE L1 5588 6582 0 5 718 225 0 0 0 chr17 17504219 17504244 -77768407 + (A)n Simple_repeat Simple_repeat 1 25 0 6 718 303 200 47 0 chr17 17504244 17504329 -77768322 + L1_Mur3 LINE L1 4373 4461 -1419 7 718 4570 188 49 4 chr17 17504315 17505237 -77767414 + Lx7 LINE L1 6185 7147 -549 8 718 1406 44 44 0 chr17 17505275 17505456 -77767195 - B2_Mm1a SINE B2 -3 190 2 9 718 5842 123 8 15 chr17 17505459 17506342 -77766309 - Lx4A LINE L1 0 7058 6182 1 718 1076 129 30 20 chr17 17506355 17506542 -77766109 - ORR1A2 LTR MaLR 0 379 140 1 718 1241 91 34 0 chr17 17506542 17506717 -77765934 - B2_Mm2 SINE B2 -14 181 1 1 718 391 225 155 17 chr17 17507282 17507463 -77765188 - L1MA4 LINE L1 -340 5960 5755 1 718 273 237 53 0 chr17 17507465 17507541 -77765110 + L1MA4 LINE L1 5542 5621 -676 1 718 760 128 15 0 chr17 17508123 17508256 -77764395 + (TC)n Simple_repeat Simple_repeat 2 136 0 1 718 2146 142 6 6 chr17 17508283 17508624 -77764027 - RLTR14 LTR ERV1 -35 347 7 1 718 381 93 0 0 chr17 17508838 17508892 -77763759 + (TTCC)n Simple_repeat Simple_repeat 3 56 0 1 718 505 160 32 0 chr17 17508927 17509021 -77763630 - B1_Mur4 SINE Alu 0 150 54 1 718 1117 106 25 0 chr17 17509030 17509190 -77763461 + B2_Mm2 SINE B2 17 180 -15 1 718 473 87 375 0 chr17 17509219 17509323 -77763328 + B2_Mm2 SINE B2 47 189 -6 1 718 327 25 0 0 chr17 17509323 17509363 -77763288 + (GGGGA)n Simple_repeat Simple_repeat 2 41 0 2 718 402 215 0 0 chr17 17509363 17509428 -77763223 - B1_Mur4 SINE Alu -85 65 1 1 718 336 237 12 84 chr17 17509428 17509446 -77763205 - B4 SINE B4 -143 149 73 2 718 714 166 199 33 chr17 17509815 17509996 -77762655 + URR1B DNA MER1_type 15 225 0 2 718 230 316 63 70 chr17 17512212 17512355 -77760296 - L2 LINE L2 -2855 564 423 2 718 245 70 47 0 chr17 17512453 17512496 -77760155 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 2 718 1094 89 7 0 chr17 17512496 17512642 -77760009 - B1_Mus1 SINE Alu 0 148 2 2 718 720 187 8 0 chr17 17513699 17513822 -77758829 - B1_Mus2 SINE Alu -23 124 1 2 718 247 276 24 0 chr17 17513715 17513842 -77758809 - ORR1B1-int LTR MaLR -755 754 625 2 718 233 203 108 15 chr17 17514924 17514989 -77757662 - MLT1H LTR MaLR -362 187 117 2 718 180 302 0 36 chr17 17516154 17516209 -77756442 - L3 LINE CR1 -896 3593 3541 2 718 1141 82 0 0 chr17 17516512 17516659 -77755992 - B1_Mm SINE Alu 0 147 1 3 718 228 243 28 14 chr17 17517355 17517426 -77755225 + ID4 SINE ID 2 73 -10 3 718 185 59 0 56 chr17 17517449 17517485 -77755166 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 3 718 952 135 110 119 chr17 17518723 17518950 -77753701 - URR1B DNA MER1_type 0 225 1 3 718 1618 37 0 0 chr17 17520021 17520210 -77752441 + B2_Mm1a SINE B2 2 190 -3 3 718 784 130 73 8 chr17 17520470 17520594 -77752057 + B1_Mus1 SINE Alu 1 132 -16 3 718 216 345 134 11 chr17 17520999 17521178 -77751473 - L2 LINE L2 -648 2771 2571 3 718 1086 72 0 0 chr17 17521179 17521318 -77751333 + B1_Mus1 SINE Alu 2 140 -8 3 718 639 39 0 0 chr17 17521323 17521401 -77751250 + (GAAA)n Simple_repeat Simple_repeat 2 79 0 3 718 874 106 8 0 chr17 17522762 17522885 -77749766 - B2_Mm2 SINE B2 -71 124 1 3 718 435 290 129 51 chr17 17523022 17523048 -77749603 - B3A SINE B2 -4 194 169 4 718 1789 207 57 12 chr17 17523048 17523449 -77749202 - MTD LTR MaLR 0 419 1 4 718 435 290 129 51 chr17 17523449 17523600 -77749051 - B3A SINE B2 -30 168 3 4 718 1117 133 0 0 chr17 17523740 17523905 -77748746 + B2_Mm1t SINE B2 1 165 -28 4 718 234 0 0 0 chr17 17524549 17524575 -77748076 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 4 718 1163 49 7 0 chr17 17525501 17525645 -77747006 + B1_Mus1 SINE Alu 2 146 -2 4 718 673 222 17 0 chr17 17526157 17526274 -77746377 + RSINE1 SINE B4 30 148 -17 4 718 23 33 0 0 chr17 17526283 17526313 -77746338 + AT_rich Low_complexity Low_complexity 1 30 0 4 718 242 238 103 56 chr17 17526466 17526573 -77746078 + PB1D7 SINE Alu 2 113 -7 4 718 706 285 107 42 chr17 17528212 17528428 -77744223 + B4A SINE B4 61 290 -2 4 718 795 119 17 0 chr17 17528660 17528778 -77743873 + PB1D9 SINE Alu 1 120 0 4 718 289 236 163 59 chr17 17529923 17530058 -77742593 + ID_B1 SINE B4 65 213 -11 5 718 573 88 0 0 chr17 17531238 17531318 -77741333 + (GA)n Simple_repeat Simple_repeat 1 80 0 5 718 383 194 90 20 chr17 17532049 17532149 -77740502 + PB1D9 SINE Alu 1 107 -13 5 718 505 144 94 20 chr17 17532168 17532281 -77740370 + B1_Mur4 SINE Alu 1 150 0 5 718 183 42 0 0 chr17 17532283 17532307 -77740344 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 5 718 1245 34 0 0 chr17 17532965 17533112 -77739539 + B1_Mus2 SINE Alu 1 147 0 5 718 650 316 53 49 chr17 17533292 17533555 -77739096 + B4A SINE B4 9 272 -20 5 718 315 0 0 0 chr17 17533555 17533590 -77739061 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 718 246 62 0 0 chr17 17535224 17535256 -77737395 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 718 343 346 44 7 chr17 17535959 17536096 -77736555 + RSINE1 SINE B4 4 145 -20 5 718 1001 128 0 0 chr17 17536626 17536767 -77735884 - B1_Mus1 SINE Alu -5 143 3 6 718 231 265 152 10 chr17 17537169 17537268 -77735383 - MIR3 SINE MIR -1 207 95 6 718 396 248 12 0 chr17 17537369 17537479 -77735172 + B3 SINE B2 35 211 -5 6 718 901 35 9 0 chr17 17537816 17537932 -77734719 + B1_Mus1 SINE Alu 31 147 -1 6 718 257 329 0 0 chr17 17537984 17538060 -77734591 + ID4 SINE ID 2 77 -6 6 718 232 96 19 37 chr17 17538793 17538847 -77733804 + (TGG)n Simple_repeat Simple_repeat 1 53 0 6 718 456 342 31 49 chr17 17538863 17539149 -77733502 - B4A SINE B4 -7 285 5 6 718 276 77 0 0 chr17 17540981 17541020 -77731631 + (GA)n Simple_repeat Simple_repeat 2 40 0 6 718 207 100 0 0 chr17 17542541 17542571 -77730080 + (T)n Simple_repeat Simple_repeat 1 30 0 6 718 24 0 0 0 chr17 17544784 17544808 -77727843 + AT_rich Low_complexity Low_complexity 1 24 0 6 718 192 158 0 0 chr17 17546630 17546668 -77725983 + A-rich Low_complexity Low_complexity 1 38 0 7 718 904 197 83 42 chr17 17547458 17547918 -77724733 - RMER17C LTR ERVK 0 410 1 7 718 526 149 31 98 chr17 17547995 17548188 -77724463 + RMER17C LTR ERVK 96 275 -135 7 718 25 31 0 0 chr17 17548188 17548220 -77724431 + AT_rich Low_complexity Low_complexity 1 32 0 7 718 735 95 0 0 chr17 17548664 17548769 -77723882 + (TC)n Simple_repeat Simple_repeat 2 106 0 7 718 186 167 0 0 chr17 17548798 17548834 -77723817 + (CTG)n Simple_repeat Simple_repeat 1 36 0 7 718 922 148 6 51 chr17 17548834 17548991 -77723660 - B1_Mur4 SINE Alu 0 150 1 7 718 238 275 25 0 chr17 17549343 17549423 -77723228 - L1_Mur2 LINE L1 -2255 3622 3541 7 718 236 149 0 21 chr17 17549450 17549498 -77723153 + CT-rich Low_complexity Low_complexity 3 49 0 7 718 294 94 0 45 chr17 17549565 17549632 -77723019 + (TA)n Simple_repeat Simple_repeat 2 65 0 7 718 357 222 80 100 chr17 17549665 17549765 -77722886 - PB1D10 SINE Alu -9 108 11 8 718 1750 139 23 0 chr17 17549765 17550031 -77722620 - ORR1C1 LTR MaLR -1 377 106 8 718 5146 111 71 9 chr17 17550032 17550834 -77721817 + Lx2 LINE L1 6139 6990 -7 8 718 486 0 0 0 chr17 17550852 17550906 -77721745 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 8 718 1069 81 20 0 chr17 17550910 17551059 -77721592 - B2_Mm2 SINE B2 -42 153 2 8 718 372 119 0 0 chr17 17551079 17551138 -77721513 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 8 718 563 153 90 0 chr17 17551208 17551319 -77721332 - ORR1C1 LTR MaLR -263 121 1 8 718 901 90 136 14 chr17 17551325 17551472 -77721179 + ORR1A2 LTR MaLR 2 166 -161 8 718 343 122 0 0 chr17 17551474 17551523 -77721128 + PB1D9 SINE Alu 11 59 -61 8 718 967 159 4 9 chr17 17551523 17551760 -77720891 + GA-rich Low_complexity Low_complexity 1 235 0 8 718 874 71 8 8 chr17 17551761 17551889 -77720762 + (GAAAA)n Simple_repeat Simple_repeat 1 128 0 8 718 1008 97 96 6 chr17 17551889 17552045 -77720606 + ORR1A2 LTR MaLR 150 319 -8 8 718 269 231 89 49 chr17 17552072 17552195 -77720456 - L1M2 LINE L1 -2572 3571 3444 9 718 552 29 0 0 chr17 17552218 17552288 -77720363 + B1_Mur4 SINE Alu 81 150 0 9 718 252 0 0 0 chr17 17552288 17552316 -77720335 + (A)n Simple_repeat Simple_repeat 1 28 0 9 718 726 152 0 0 chr17 17552474 17552599 -77720052 + CT-rich Low_complexity Low_complexity 2 126 0 9 718 1112 75 0 7 chr17 17552599 17552747 -77719904 - B1_Mm SINE Alu 0 147 1 9 718 491 50 37 24 chr17 17552761 17552843 -77719808 - L1Md_F2 LINE L1 0 6582 6500 9 718 658 316 59 43 chr17 17552909 17553049 -77719602 - L1M2 LINE L1 -3048 3095 2962 9 718 1840 109 148 22 chr17 17553049 17553226 -77719425 - RMER17C LTR ERVK 0 410 234 9 718 506 16 16 0 chr17 17553226 17553289 -77719362 + (GA)n Simple_repeat Simple_repeat 1 64 0 9 718 1840 109 148 22 chr17 17553289 17553475 -77719176 - RMER17C LTR ERVK -177 233 2 9 718 658 316 59 43 chr17 17553475 17553896 -77718755 - L1M2 LINE L1 -3182 2961 2525 9 718 1418 78 10 5 chr17 17553962 17554154 -77718497 - B2_Mm1t SINE B2 0 193 1 9 718 1042 168 20 25 chr17 17554175 17554371 -77718280 - MTC LTR MaLR 0 421 227 9 718 766 56 9 18 chr17 17554338 17554447 -77718204 + B1_Mus2 SINE Alu 39 146 -1 1 718 411 206 369 89 chr17 17554458 17554652 -77717999 - MTC LTR MaLR -173 248 1 9 718 399 273 113 18 chr17 17554654 17554884 -77717767 - L1M4c LINE L1 -3743 2639 2381 1 718 1160 42 7 0 chr17 17554885 17555027 -77717624 - B1_Mus1 SINE Alu -5 143 1 1 718 330 315 79 98 chr17 17555247 17555739 -77716912 - L1M4c LINE L1 -4714 1670 1188 1 718 1129 51 0 0 chr17 17555755 17555892 -77716759 - B1_Mus1 SINE Alu -10 138 2 1 718 1208 240 58 14 chr17 17556036 17556399 -77716252 - MTEa LTR MaLR 0 379 1 1 718 217 51 0 49 chr17 17557083 17557124 -77715527 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 1 718 659 203 85 8 chr17 17557124 17557253 -77715398 - B1_Mur4 SINE Alu 0 150 12 1 718 362 242 0 108 chr17 17557159 17557270 -77715381 - MT2B LTR ERVL -344 257 159 1 718 264 59 0 0 chr17 17557277 17557311 -77715340 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 1 718 249 331 109 51 chr17 17558157 17558294 -77714357 - MER117 DNA MER1_type -50 147 3 1 718 234 91 0 0 chr17 17559705 17559738 -77712913 + (T)n Simple_repeat Simple_repeat 1 33 0 1 718 1259 41 0 0 chr17 17559738 17559885 -77712766 - B1_Mm SINE Alu 0 147 1 1 718 1009 273 29 12 chr17 17560104 17560345 -77712306 + RCHARR1 DNA MER1_type 3 247 -727 1 718 1542 52 11 0 chr17 17561546 17561737 -77710914 - B2_Mm1t SINE B2 0 193 1 1 718 343 189 40 0 chr17 17562110 17562184 -77710467 - ID2 SINE ID -5 78 2 1 718 198 0 0 0 chr17 17562348 17562370 -77710281 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1 718 393 98 298 8 chr17 17562370 17562486 -77710165 - Lx3_Mus LINE L1 -19 6990 6839 1 718 231 146 0 0 chr17 17562565 17562606 -77710045 + (A)n Simple_repeat Simple_repeat 1 41 0 1 718 286 310 17 42 chr17 17562880 17562998 -77709653 + L3 LINE CR1 4372 4486 -3 1 718 21 36 0 0 chr17 17563465 17563493 -77709158 + AT_rich Low_complexity Low_complexity 1 28 0 1 89 477 276 148 7 chr17 17563565 17563707 -77708944 + RSINE1 SINE B4 3 164 -1 1 719 1109 58 36 0 chr17 17563798 17563937 -77708714 - B1_Mus1 SINE Alu 0 148 5 1 719 791 186 8 0 chr17 17564686 17564815 -77707836 + B1_Mur1 SINE Alu 12 141 -8 1 719 21 0 0 0 chr17 17564820 17564841 -77707810 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 231 252 124 19 chr17 17564884 17564989 -77707662 + MIRm SINE MIR 41 156 -120 1 719 935 208 86 35 chr17 17565081 17565395 -77707256 - RMER17C LTR ERVK 0 410 81 1 719 710 235 27 66 chr17 17565408 17565741 -77706910 - RMER17A2 LTR ERVK -417 489 170 1 719 1271 90 11 6 chr17 17566327 17566505 -77706146 + B2_Mm1t SINE B2 1 179 -14 1 719 325 91 391 52 chr17 17566559 17566651 -77706000 + B2_Mm2 SINE B2 47 171 -24 1 719 1316 82 11 11 chr17 17566651 17566835 -77705816 - B2_Mm1t SINE B2 -8 185 2 1 719 278 34 0 78 chr17 17566835 17566862 -77705789 + B2_Mm2 SINE B2 172 195 0 1 719 432 0 0 0 chr17 17566883 17566931 -77705720 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 719 589 211 28 0 chr17 17566956 17567065 -77705586 - RSINE1 SINE B4 -51 114 3 1 719 31 26 0 0 chr17 17567681 17567719 -77704932 + AT_rich Low_complexity Low_complexity 1 38 0 1 719 1261 41 0 0 chr17 17567720 17567867 -77704784 + B1_Mm SINE Alu 1 147 0 1 719 449 250 192 8 chr17 17568145 17568270 -77704381 + B3A SINE B2 1 148 -50 1 719 288 0 0 0 chr17 17568270 17568302 -77704349 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 719 2518 93 144 26 chr17 17568356 17568785 -77703866 - RLTR45 LTR ERVK -2 480 1 1 719 1235 54 0 0 chr17 17569511 17569658 -77702993 - B1_Mm SINE Alu 0 147 1 1 719 261 0 0 0 chr17 17571127 17571156 -77701495 + (T)n Simple_repeat Simple_repeat 1 29 0 1 719 24 0 0 0 chr17 17571353 17571377 -77701274 + AT_rich Low_complexity Low_complexity 1 24 0 1 719 5463 37 1 0 chr17 17571436 17572086 -77700565 + L1Md_T LINE L1 5932 6582 0 1 719 1341 68 11 6 chr17 17572239 17572416 -77700235 + B2_Mm1t SINE B2 2 179 -14 1 719 439 71 9 0 chr17 17572429 17572493 -77700158 + B2_Mm2 SINE B2 47 114 -102 1 719 261 80 40 0 chr17 17572483 17572533 -77700118 + B2_Mm1t SINE B2 138 189 -4 1 719 21 0 0 0 chr17 17572533 17572554 -77700097 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 23 33 0 0 chr17 17572588 17572618 -77700033 + AT_rich Low_complexity Low_complexity 1 30 0 1 719 351 203 0 0 chr17 17572677 17572751 -77699900 + CT-rich Low_complexity Low_complexity 3 76 0 1 719 197 0 114 23 chr17 17572747 17572791 -77699860 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 1 719 1188 68 0 0 chr17 17572796 17572943 -77699708 - B1_Mus1 SINE Alu -1 147 1 1 719 793 228 32 53 chr17 17574245 17574435 -77698216 - B3A SINE B2 -4 212 27 1 719 37 23 0 0 chr17 17574435 17574479 -77698172 + AT_rich Low_complexity Low_complexity 1 44 0 1 719 5591 48 10 1 chr17 17574516 17575211 -77697440 - L1Md_F2 LINE L1 -1 6581 5881 1 719 293 242 11 0 chr17 17575342 17575433 -77697218 + GA-rich Low_complexity Low_complexity 2 93 0 1 719 189 94 0 0 chr17 17576771 17576803 -77695848 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1 719 1127 78 0 0 chr17 17576803 17576945 -77695706 - B1_Mus1 SINE Alu -6 142 1 1 719 680 182 12 17 chr17 17577032 17577205 -77695446 + GA-rich Low_complexity Low_complexity 3 174 0 1 719 278 314 0 0 chr17 17577523 17577609 -77695042 + Arthur1B DNA Tip100 1140 1225 0 1 719 241 143 0 106 chr17 17577675 17577713 -77694938 - MER5A DNA MER1_type -26 163 131 1 719 694 309 95 68 chr17 17577713 17577935 -77694716 + B4A SINE B4 1 228 -64 1 719 21 36 0 0 chr17 17578148 17578176 -77694475 + AT_rich Low_complexity Low_complexity 1 28 0 1 719 261 0 0 0 chr17 17579279 17579308 -77693343 + (CCTG)n Simple_repeat Simple_repeat 1 29 0 1 719 342 0 0 0 chr17 17579421 17579459 -77693192 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 719 249 33 0 0 chr17 17579459 17579488 -77693163 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 719 190 276 234 19 chr17 17580425 17580532 -77692119 - MIR SINE MIR -107 155 26 1 719 225 250 12 24 chr17 17581544 17581613 -77691038 + CT-rich Low_complexity Low_complexity 17 84 0 1 719 722 189 0 15 chr17 17581613 17581747 -77690904 - B1_Mur2 SINE Alu -13 136 5 1 719 225 250 12 24 chr17 17581747 17581759 -77690892 + polypyrimidine Low_complexity Low_complexity 5 16 0 1 719 268 211 55 136 chr17 17583108 17583218 -77689433 - B3A SINE B2 0 198 98 1 719 669 257 113 17 chr17 17583907 17584137 -77688514 + Tigger5 DNA MER2_type 2122 2373 -33 1 719 1225 35 0 0 chr17 17584321 17584463 -77688188 + B1_Mus1 SINE Alu 1 142 -6 1 719 248 302 46 38 chr17 17584895 17585026 -77687625 + MIR SINE MIR 120 251 -11 1 719 425 19 19 0 chr17 17585087 17585141 -77687510 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 719 22 0 0 0 chr17 17585506 17585528 -77687123 + AT_rich Low_complexity Low_complexity 1 22 0 1 719 361 243 0 13 chr17 17586668 17586743 -77685908 - MER45A DNA Tip100 0 178 105 1 719 325 287 95 27 chr17 17586784 17586931 -77685720 + MER96B DNA hAT 2 158 -259 1 719 306 0 0 0 chr17 17586942 17586976 -77685675 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1 719 309 291 48 19 chr17 17586976 17587081 -77685570 - PB1D9 SINE Alu -11 109 2 1 719 492 256 99 23 chr17 17587429 17587465 -77685186 + ID_B1 SINE B4 40 224 0 1 719 632 200 73 7 chr17 17587465 17587601 -77685050 + B1_Mus1 SINE Alu 4 148 0 1 719 298 247 24 24 chr17 17588284 17588367 -77684284 + ID4 SINE ID 1 83 0 1 719 186 43 0 0 chr17 17588430 17588453 -77684198 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 719 860 283 62 14 chr17 17588471 17588676 -77683975 + B4A SINE B4 2 217 -75 1 719 266 0 0 29 chr17 17588676 17588711 -77683940 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 719 860 283 62 14 chr17 17588711 17588781 -77683870 + B4A SINE B4 218 289 -3 1 719 1171 54 0 0 chr17 17589945 17590092 -77682559 - B1_Mm SINE Alu 0 147 1 1 719 2458 31 0 0 chr17 17590145 17590431 -77682220 - L1Md_F2 LINE L1 -12 6570 6285 1 719 208 286 0 0 chr17 17590473 17590529 -77682122 + CT-rich Low_complexity Low_complexity 3 58 0 1 719 311 328 47 54 chr17 17592760 17592889 -77679762 - RMER4A LTR ERVK -331 135 8 1 719 524 294 38 50 chr17 17593083 17593323 -77679328 - RLTR12B LTR ERVK -269 259 23 1 719 865 98 224 19 chr17 17593783 17593939 -77678712 - B2_Mm2 SINE B2 -6 189 2 1 719 591 178 100 36 chr17 17594750 17594890 -77677761 - B1_Mur4 SINE Alu 0 150 2 1 719 180 111 0 0 chr17 17595972 17595999 -77676652 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 1 719 1258 34 0 0 chr17 17595999 17596146 -77676505 - B1_Mus1 SINE Alu 0 148 2 1 719 246 360 46 63 chr17 17596833 17597008 -77675643 + MER5B DNA MER1_type 7 178 0 1 719 282 364 76 19 chr17 17598020 17598177 -77674474 - Tigger16b DNA Tigger -3 334 169 1 719 284 282 42 0 chr17 17598215 17598286 -77674365 + BC1_Mm scRNA scRNA 5 78 -74 1 719 236 370 101 16 chr17 17598699 17598828 -77673823 - MLT1K LTR MaLR -419 176 37 1 719 430 320 126 27 chr17 17598951 17599214 -77673437 + MARNA DNA Mariner 290 578 -8 1 719 1300 15 25 0 chr17 17599757 17599958 -77672693 + (TCTA)n Simple_repeat Simple_repeat 1 206 0 1 719 337 349 98 9 chr17 17600543 17600757 -77671894 + LTR48B LTR ERV1 6 238 -406 1 719 21 0 0 0 chr17 17602090 17602111 -77670540 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 459 315 40 80 chr17 17602314 17602614 -77670037 - B4A SINE B4 -3 289 2 2 719 235 250 167 0 chr17 17602614 17602708 -77669943 + Charlie5 DNA MER1_type 2446 2555 -69 2 719 563 274 0 30 chr17 17602745 17602877 -77669774 - RSINE1 SINE B4 -2 163 36 2 719 304 336 0 8 chr17 17605790 17605919 -77666732 + Lx9 LINE L1 6848 6975 -669 2 719 737 265 10 15 chr17 17606008 17606207 -77666444 + B3A SINE B2 1 198 0 2 719 1190 28 0 40 chr17 17606313 17606461 -77666190 + B1_Mm SINE Alu 1 142 -5 2 719 327 121 0 0 chr17 17606461 17606519 -77666132 + (A)n Simple_repeat Simple_repeat 1 58 0 2 719 320 47 23 0 chr17 17606930 17606973 -77665678 - B1_Mus1 SINE Alu -104 44 1 2 719 278 306 32 0 chr17 17607195 17607257 -77665394 + tRNA-Ala-GCY_ tRNA tRNA 1 64 -11 2 719 260 292 204 0 chr17 17607818 17607955 -77664696 - MIR SINE MIR -7 255 91 2 719 207 0 0 0 chr17 17607955 17607978 -77664673 + (A)n Simple_repeat Simple_repeat 1 23 0 2 719 3699 63 2 0 chr17 17608079 17608590 -77664061 - L1_Mm LINE L1 -1814 4069 3558 2 719 7687 30 30 0 chr17 17608590 17609502 -77663149 + L1Md_F2 LINE L1 5644 6582 0 2 719 300 360 80 0 chr17 17609528 17609628 -77663023 - MER5A DNA MER1_type -80 109 2 2 719 3274 11 0 5 chr17 17609754 17610123 -77662528 + IAPLTR1_Mm LTR ERVK 1 367 0 2 719 27626 22 19 0 chr17 17610123 17613755 -77658896 + IAPEz-int LTR ERVK 8 3729 -2752 2 719 14715 25 1 4 chr17 17613738 17615400 -77657251 + IAPEz-int LTR ERVK 4824 6481 0 2 719 3468 11 0 5 chr17 17615400 17615769 -77656882 + IAPLTR1_Mm LTR ERVK 1 367 0 2 719 1299 132 26 0 chr17 17616061 17616250 -77656401 - B2_Mm2 SINE B2 0 195 2 2 719 281 296 20 10 chr17 17616385 17616484 -77656167 - MIRb SINE MIR -74 194 95 2 719 249 318 12 12 chr17 17616576 17616662 -77655989 + RMER4A LTR ERVK 8 93 -373 2 719 370 287 10 10 chr17 17617236 17617338 -77655313 + B1F SINE Alu 41 142 -7 2 719 300 241 49 25 chr17 17617934 17618015 -77654636 - B1F1 SINE Alu -20 129 47 2 719 3636 157 75 69 chr17 17618128 17618361 -77654290 + RMER19B LTR ERVK 1 214 -688 2 719 3241 48 0 5 chr17 17618361 17618738 -77653913 - L1Md_F2 LINE L1 0 6582 6208 2 719 3636 157 75 69 chr17 17618738 17619262 -77653389 + RMER19B LTR ERVK 215 763 -139 2 719 641 13 0 13 chr17 17619406 17619485 -77653166 + (TTTC)n Simple_repeat Simple_repeat 2 79 0 2 719 1269 104 5 52 chr17 17619485 17619677 -77652974 - B2_Mm2 SINE B2 -12 183 1 2 719 360 0 0 0 chr17 17620927 17620967 -77651684 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 719 471 340 51 15 chr17 17621003 17621200 -77651451 - B4A SINE B4 -87 205 2 2 719 329 345 61 49 chr17 17621299 17621546 -77651105 + L1MEg LINE L1 606 855 -5229 2 719 22 0 0 0 chr17 17621602 17621624 -77651027 + AT_rich Low_complexity Low_complexity 1 22 0 2 719 558 234 69 23 chr17 17621632 17621763 -77650888 - B1_Mur2 SINE Alu 0 149 13 2 719 605 27 0 0 chr17 17621824 17621897 -77650754 + B1_Mus2 SINE Alu 62 134 -13 2 719 249 33 0 0 chr17 17621897 17621927 -77650724 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 2 719 225 0 0 0 chr17 17621937 17621962 -77650689 + (GA)n Simple_repeat Simple_repeat 1 25 0 2 719 401 0 20 0 chr17 17623143 17623192 -77649459 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 719 519 17 0 0 chr17 17623192 17623251 -77649400 + (GA)n Simple_repeat Simple_repeat 1 60 0 2 719 443 112 16 49 chr17 17623342 17623464 -77649187 + (CAGAGA)n Simple_repeat Simple_repeat 3 120 0 2 719 203 255 0 0 chr17 17623951 17624002 -77648649 + T-rich Low_complexity Low_complexity 2 52 0 2 719 1967 45 20 0 chr17 17625195 17625214 -77647437 - L1Md_F2 LINE L1 -459 6123 6103 2 719 1976 93 11 18 chr17 17625214 17625488 -77647163 - L1Md_F2 LINE L1 -1 6581 6310 2 719 1967 45 20 0 chr17 17625488 17625714 -77646937 - L1Md_F2 LINE L1 -480 6102 5875 2 719 1663 45 2 4 chr17 17625718 17625931 -77646720 + L1Md_F2 LINE L1 5693 5902 -1794 2 719 244 0 56 0 chr17 17625935 17625971 -77646680 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2 719 1194 48 7 39 chr17 17625980 17626133 -77646518 - B1_Mus1 SINE Alu 0 148 1 2 719 21 0 0 0 chr17 17627411 17627432 -77645219 + AT_rich Low_complexity Low_complexity 1 21 0 2 719 881 250 15 10 chr17 17627468 17627674 -77644977 - B4 SINE B4 -84 208 2 2 719 261 343 14 0 chr17 17627774 17627844 -77644807 + ID4_ SINE ID 2 72 -11 2 719 234 105 0 0 chr17 17628284 17628322 -77644329 + (C)n Simple_repeat Simple_repeat 1 38 0 2 719 189 183 0 0 chr17 17628931 17628991 -77643660 + CT-rich Low_complexity Low_complexity 1 60 0 2 719 298 362 53 111 chr17 17630208 17630550 -77642101 + ORR1E LTR MaLR 27 348 -11 2 719 2459 169 79 66 chr17 17631657 17632082 -77640569 - Lx9 LINE L1 -6 7638 7199 2 719 1640 37 16 5 chr17 17632082 17632270 -77640381 - B2_Mm1a SINE B2 -2 191 2 2 719 2459 169 79 66 chr17 17632270 17632416 -77640235 - Lx9 LINE L1 -446 7198 7060 2 719 7644 63 5 0 chr17 17633009 17633898 -77638753 - RLTR13B1 LTR ERVK 0 893 1 2 719 473 164 398 0 chr17 17634104 17634242 -77638409 + MTD LTR MaLR 19 211 -210 2 719 2350 62 34 3 chr17 17634242 17634493 -77638158 - L1_Mm LINE L1 -386 5497 5248 2 719 288 0 0 0 chr17 17634493 17634525 -77638126 + (TA)n Simple_repeat Simple_repeat 1 32 0 2 719 2350 62 34 3 chr17 17634525 17634595 -77638056 - L1_Mm LINE L1 -636 5247 5167 2 719 1249 97 0 0 chr17 17634595 17634760 -77637891 + L1_Mm LINE L1 5495 5659 -224 2 719 1536 63 0 0 chr17 17634778 17634967 -77637684 + L1_Mus2 LINE L1 6378 6566 0 2 719 684 36 0 0 chr17 17634982 17635065 -77637586 + (GAAA)n Simple_repeat Simple_repeat 2 84 0 2 719 285 98 0 0 chr17 17635261 17635302 -77637349 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 2 719 1109 138 87 5 chr17 17635302 17635498 -77637153 + MTD LTR MaLR 196 407 -12 2 719 606 239 15 74 chr17 17636192 17636395 -77636256 - MLT1E2 LTR MaLR -436 191 1 2 719 285 271 0 0 chr17 17636434 17636493 -77636158 + tRNA-Ala-GCY_ tRNA tRNA 10 68 -7 2 719 253 365 0 0 chr17 17636493 17636508 -77636143 + BC1_Mm scRNA scRNA 16 89 -63 2 719 1307 233 157 71 chr17 17636632 17637154 -77635497 - RMER2 LTR ERV1 0 567 1 2 719 654 275 0 8 chr17 17638011 17638143 -77634508 + RSINE1 SINE B4 2 132 -33 2 719 744 71 0 0 chr17 17638505 17638604 -77634047 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 2 719 981 144 20 14 chr17 17638609 17638757 -77633894 - B1_Mur4 SINE Alu 0 150 2 2 719 432 0 0 0 chr17 17640098 17640146 -77632505 + (TTTC)n Simple_repeat Simple_repeat 3 50 0 2 719 863 109 15 0 chr17 17640146 17640283 -77632368 + (TCCC)n Simple_repeat Simple_repeat 2 140 0 2 719 1072 119 11 0 chr17 17640284 17640461 -77632190 + (TC)n Simple_repeat Simple_repeat 2 180 0 2 719 225 0 0 0 chr17 17640461 17640485 -77632166 + (TTTC)n Simple_repeat Simple_repeat 4 28 0 2 719 838 81 0 0 chr17 17640485 17640596 -77632055 - B1_Mus1 SINE Alu -12 136 26 2 719 1339 262 25 85 chr17 17640596 17640996 -77631655 + MTE2b LTR MaLR 4 379 0 2 719 429 260 40 16 chr17 17641046 17641171 -77631480 + Charlie1a DNA MER1_type 103 230 -1225 2 719 266 316 106 35 chr17 17641198 17641339 -77631312 + Charlie1a DNA MER1_type 334 484 -971 2 719 2969 68 141 139 chr17 17641344 17641855 -77630796 + RLTR1B LTR ERV1 1 512 0 2 719 1729 79 15 103 chr17 17641855 17642340 -77630311 + RLTR1B-int LTR ERV1 1 537 -3161 2 719 1304 108 0 163 chr17 17642346 17642622 -77630029 + MMVL30-int LTR ERV1 307 537 -3161 2 719 1316 101 0 137 chr17 17642616 17643055 -77629596 + RLTR1B-int LTR ERV1 119 537 -3161 2 719 12607 77 83 34 chr17 17643051 17644973 -77627678 + RLTR1B-int LTR ERV1 119 2026 -1273 2 719 255 158 0 0 chr17 17644963 17645001 -77627650 + RLTR1B-int LTR ERV1 2754 2791 -2272 2 719 5207 54 34 0 chr17 17644999 17645642 -77627009 + RLTR1B-int LTR ERV1 2635 3299 0 2 719 3020 57 143 139 chr17 17645642 17646152 -77626499 + RLTR1B LTR ERV1 1 512 0 2 719 708 316 85 51 chr17 17646290 17646814 -77625837 + L1MD1 LINE L1 5703 6234 -8 2 719 738 294 10 44 chr17 17646824 17647030 -77625621 + ID_B1 SINE B4 5 203 -21 2 719 229 163 47 0 chr17 17647036 17647079 -77625572 + GA-rich Low_complexity Low_complexity 1 45 0 2 719 367 297 62 43 chr17 17647159 17647370 -77625281 + Charlie1a DNA MER1_type 713 927 -528 2 719 1692 150 48 7 chr17 17647378 17647687 -77624964 + RMER4B LTR ERVK 17 338 -247 2 719 561 147 0 0 chr17 17647687 17647782 -77624869 + (GGA)n Simple_repeat Simple_repeat 1 95 0 2 719 397 246 15 20 chr17 17647782 17647984 -77624667 + GA-rich Low_complexity Low_complexity 1 200 0 2 719 526 164 236 8 chr17 17647984 17648107 -77624544 + RMER4B LTR ERVK 320 470 -115 2 719 411 186 133 10 chr17 17648078 17648144 -77624507 + RMER4B LTR ERVK 357 425 -41 2 719 203 0 37 0 chr17 17648144 17648171 -77624480 + (GAA)n Simple_repeat Simple_repeat 3 30 0 2 719 411 186 133 10 chr17 17648171 17648202 -77624449 + RMER4B LTR ERVK 426 465 -1 2 719 1275 254 108 17 chr17 17648224 17648697 -77623954 + Charlie1a DNA MER1_type 940 1455 0 2 719 648 255 252 9 chr17 17648721 17649038 -77623613 - L1MB7 LINE L1 -16 6168 5775 2 719 1503 187 217 16 chr17 17649042 17649167 -77623484 - L1MB7 LINE L1 -739 5435 5309 2 719 415 226 218 35 chr17 17649167 17649341 -77623310 - B3 SINE B2 -10 206 1 2 719 1503 290 78 89 chr17 17649341 17650589 -77622062 - L1MB7 LINE L1 -838 5308 4066 2 719 1437 86 11 11 chr17 17650589 17650778 -77621873 - B2_Mm1t SINE B2 -3 190 2 2 719 1503 290 78 89 chr17 17650778 17650923 -77621728 - L1MB7 LINE L1 -2081 4065 3920 2 719 3571 146 64 102 chr17 17650938 17651245 -77621406 + RLTR21 LTR ERVK 772 1090 -482 2 719 1599 218 104 38 chr17 17651245 17651718 -77620933 + RLTR16 LTR ERVK 2 505 0 2 719 3571 146 64 102 chr17 17651718 17652243 -77620408 + RLTR21 LTR ERVK 1091 1572 0 2 719 21 0 0 0 chr17 17652252 17652273 -77620378 + AT_rich Low_complexity Low_complexity 1 21 0 2 719 297 0 0 0 chr17 17652381 17652414 -77620237 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 2 719 4228 166 11 8 chr17 17652443 17653177 -77619474 + Lx3C LINE L1 6136 6871 -105 2 719 198 0 0 0 chr17 17654640 17654662 -77617989 + (CCAA)n Simple_repeat Simple_repeat 2 23 0 2 719 420 239 102 0 chr17 17654830 17654918 -77617733 - RSINE1 SINE B4 -65 100 4 2 719 305 274 0 0 chr17 17655408 17655481 -77617170 + MIR3 SINE MIR 133 205 -3 2 719 630 213 74 0 chr17 17655746 17655868 -77616783 - RSINE1 SINE B4 -31 134 4 2 719 1067 65 0 0 chr17 17656560 17656699 -77615952 + B1_Mus2 SINE Alu 9 147 0 2 719 330 91 0 0 chr17 17656699 17656754 -77615897 + (A)n Simple_repeat Simple_repeat 1 55 0 2 719 1069 55 0 8 chr17 17657091 17657218 -77615433 + B1_Mus2 SINE Alu 4 129 -18 2 719 282 336 7 94 chr17 17658087 17658225 -77614426 + MER20 DNA MER1_type 86 211 -8 2 719 570 98 0 0 chr17 17658795 17658877 -77613774 + (CA)n Simple_repeat Simple_repeat 1 82 0 2 719 340 149 21 31 chr17 17660242 17660339 -77612312 + (TA)n Simple_repeat Simple_repeat 2 97 0 2 719 23 33 0 0 chr17 17660931 17660961 -77611690 + AT_rich Low_complexity Low_complexity 1 30 0 2 719 21 36 0 0 chr17 17661594 17661622 -77611029 + AT_rich Low_complexity Low_complexity 1 28 0 3 719 24 32 0 0 chr17 17661816 17661847 -77610804 + AT_rich Low_complexity Low_complexity 1 31 0 3 719 189 0 0 0 chr17 17662264 17662285 -77610366 + (CCAA)n Simple_repeat Simple_repeat 2 22 0 3 719 21 0 0 0 chr17 17663102 17663123 -77609528 + AT_rich Low_complexity Low_complexity 1 21 0 3 719 408 55 0 0 chr17 17663424 17663479 -77609172 + (GAA)n Simple_repeat Simple_repeat 2 56 0 3 719 27 0 0 0 chr17 17665162 17665189 -77607462 + AT_rich Low_complexity Low_complexity 1 27 0 3 719 207 0 0 0 chr17 17665571 17665594 -77607057 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 719 216 0 0 0 chr17 17668510 17668534 -77604117 + (T)n Simple_repeat Simple_repeat 1 24 0 3 719 4438 142 51 8 chr17 17668976 17669983 -77602668 + Lx5 LINE L1 969 2060 -3817 3 719 15672 141 31 8 chr17 17670035 17672940 -77599711 + Lx5 LINE L1 3092 6069 -981 3 719 1391 74 26 5 chr17 17673013 17673204 -77599447 + B2_Mm2 SINE B2 1 195 0 3 719 210 289 0 126 chr17 17674500 17674595 -77598056 + B4 SINE B4 14 96 -196 3 719 370 247 0 0 chr17 17674595 17674672 -77597979 + ID2 SINE ID 1 77 -6 3 719 216 296 19 0 chr17 17674716 17674770 -77597881 + PB1D9 SINE Alu 2 56 -64 3 719 354 216 58 88 chr17 17674816 17674953 -77597698 + L1M3 LINE L1 5478 5610 -561 3 719 795 260 135 12 chr17 17674954 17675199 -77597452 + B4 SINE B4 4 278 -14 3 719 353 252 93 39 chr17 17675255 17675433 -77597218 + L1M3 LINE L1 5617 5807 -364 3 719 245 292 0 0 chr17 17675905 17675953 -77596698 - PB1D10 SINE Alu -19 98 51 3 719 335 125 358 46 chr17 17676315 17676424 -77596227 - B2_Mm1t SINE B2 -3 190 48 3 719 1261 97 11 0 chr17 17676456 17676632 -77596019 - B2_Mm1t SINE B2 -14 179 2 3 719 1928 169 105 5 chr17 17677125 17677506 -77595145 + MTC LTR MaLR 3 421 0 3 719 544 74 0 0 chr17 17678349 17678430 -77594221 - L1_Mus2 LINE L1 0 6566 6486 3 719 1496 236 192 106 chr17 17679222 17679350 -77593301 - RMER13A LTR ERVK 0 860 726 3 719 537 58 0 0 chr17 17679350 17679419 -77593232 + (TG)n Simple_repeat Simple_repeat 1 69 0 3 719 1496 236 192 106 chr17 17679419 17679483 -77593168 - RMER13A LTR ERVK -135 725 693 3 719 2207 78 9 12 chr17 17679483 17679806 -77592845 + L1_Mus2 LINE L1 6245 6566 0 3 719 1496 236 192 106 chr17 17679806 17680356 -77592295 - RMER13A LTR ERVK -168 692 53 3 719 421 318 33 137 chr17 17680877 17681237 -77591414 + MLT1C LTR MaLR 67 467 0 3 719 536 239 97 0 chr17 17682416 17682550 -77590101 + B1_Mur1 SINE Alu 2 148 -1 3 719 1033 64 50 0 chr17 17682748 17682889 -77589762 + B1_Mus1 SINE Alu 1 148 0 3 719 199 295 112 31 chr17 17683686 17683784 -77588867 - L2a LINE L2 -4 3422 3317 3 719 24 53 0 0 chr17 17684061 17684099 -77588552 + AT_rich Low_complexity Low_complexity 1 38 0 3 719 354 194 0 0 chr17 17684208 17684280 -77588371 + (TATG)n Simple_repeat Simple_repeat 4 75 0 3 719 187 311 81 0 chr17 17684521 17684595 -77588056 + L2a LINE L2 3347 3426 0 3 719 26 30 0 0 chr17 17684673 17684706 -77587945 + AT_rich Low_complexity Low_complexity 1 33 0 3 719 228 352 113 48 chr17 17687055 17687428 -77585223 - L2c LINE L2 -67 3320 2924 3 719 235 296 5 15 chr17 17687433 17687638 -77585013 + GA-rich Low_complexity Low_complexity 1 202 0 3 719 294 215 76 15 chr17 17687873 17687939 -77584712 + MTE2b LTR MaLR 291 360 -19 3 719 21 0 0 0 chr17 17688541 17688562 -77584089 + AT_rich Low_complexity Low_complexity 1 21 0 3 719 320 313 247 18 chr17 17688794 17688960 -77583691 - MIR SINE MIR -25 237 34 3 719 185 315 13 52 chr17 17689390 17689467 -77583184 - MER5A DNA MER1_type -9 180 107 3 719 36 53 0 0 chr17 17689557 17689614 -77583037 + AT_rich Low_complexity Low_complexity 1 57 0 3 89 35432 35 1 1 chr17 17691075 17697219 -77575432 + L1Md_T LINE L1 1 5589 -297 3 720 8915 8 0 0 chr17 17697219 17698215 -77574436 + L1Md_T LINE L1 5590 6585 0 3 720 222 62 0 0 chr17 17698245 17698277 -77574374 + (A)n Simple_repeat Simple_repeat 1 32 0 3 720 1395 50 45 0 chr17 17698741 17698920 -77573731 + B2_Mm1t SINE B2 1 187 -6 3 720 349 311 179 36 chr17 17700776 17700868 -77571783 + L2 LINE L2 1711 1799 -1620 3 720 207 88 0 0 chr17 17700868 17700902 -77571749 + (TCTA)n Simple_repeat Simple_repeat 3 36 0 3 720 349 311 179 36 chr17 17700902 17701166 -77571485 + L2 LINE L2 1800 2118 -1301 3 720 578 210 192 23 chr17 17701816 17702035 -77570616 - Tigger7 DNA MER2_type -1 2490 2235 3 720 1000 310 152 2 chr17 17702028 17702436 -77570215 - Tigger7 DNA MER2_type -2022 469 1 3 720 1010 122 71 16 chr17 17704703 17704886 -77567765 - B2_Mm2 SINE B2 -1 194 2 3 720 1161 68 7 0 chr17 17705736 17705883 -77566768 - B1_Mus1 SINE Alu 0 148 1 3 720 586 324 49 25 chr17 17706279 17706564 -77566087 + B4A SINE B4 1 292 0 3 720 245 255 0 0 chr17 17706565 17706616 -77566035 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 720 411 214 22 11 chr17 17707464 17707554 -77565097 + BC1_Mm scRNA scRNA 3 93 -59 3 720 248 277 285 0 chr17 17707573 17707703 -77564948 + MIRc SINE MIR 57 223 -45 3 720 182 316 18 0 chr17 17709025 17709082 -77563569 + L2a LINE L2 3365 3422 -4 3 720 465 265 0 75 chr17 17709626 17709646 -77563005 - ID_B1 SINE B4 -1 223 88 3 720 467 272 24 16 chr17 17709646 17709773 -77562878 - B1F1 SINE Alu -15 134 7 3 720 1771 145 70 3 chr17 17710345 17710643 -77562008 + MTC LTR MaLR 1 318 -103 3 720 463 277 64 21 chr17 17713608 17713666 -77558985 - ID_B1 SINE B4 0 224 167 3 720 387 89 0 0 chr17 17713666 17713722 -77558929 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 720 463 277 64 21 chr17 17713722 17713803 -77558848 - ID_B1 SINE B4 -58 166 79 3 720 24 32 0 0 chr17 17716806 17716837 -77555814 + AT_rich Low_complexity Low_complexity 1 31 0 3 720 351 0 0 0 chr17 17717234 17717273 -77555378 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 720 2486 123 31 76 chr17 17718590 17719040 -77553611 + L1_Mm LINE L1 5345 5774 -109 3 720 5651 123 22 58 chr17 17719066 17720056 -77552595 + Lx2B LINE L1 6045 6999 -1 3 720 270 73 0 0 chr17 17720173 17720214 -77552437 + (T)n Simple_repeat Simple_repeat 1 41 0 3 720 859 277 126 34 chr17 17720291 17720616 -77552035 - ORR1E LTR MaLR 0 359 5 3 720 1552 207 146 3 chr17 17720901 17721250 -77551401 - MTD LTR MaLR -8 411 13 3 720 298 318 71 18 chr17 17723711 17723823 -77548828 + PB1 SINE Alu 6 123 -4 3 720 309 169 0 0 chr17 17723851 17723910 -77548741 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 720 1190 43 0 0 chr17 17724008 17724148 -77548503 - B1_Mm SINE Alu -6 141 2 3 720 218 32 32 0 chr17 17725150 17725181 -77547470 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 3 720 819 265 133 26 chr17 17725419 17725683 -77546968 + B4A SINE B4 1 292 0 3 720 1620 7 0 16 chr17 17725708 17726025 -77546626 + (GGGAGA)n Simple_repeat Simple_repeat 1 311 0 3 720 456 318 112 27 chr17 17726050 17726749 -77545902 + L1MEf LINE L1 920 1677 -4565 3 720 323 302 148 22 chr17 17727085 17727356 -77545295 + L1MEf LINE L1 1955 2259 -3983 3 720 314 302 252 25 chr17 17727425 17727600 -77545051 + L1MEf LINE L1 2449 2643 -3503 3 720 3439 23 5 0 chr17 17727600 17727994 -77544657 + MTA_Mm LTR MaLR 1 396 0 3 720 314 302 252 25 chr17 17727994 17728122 -77544529 + L1MEf LINE L1 2644 2796 -3350 3 720 283 264 0 65 chr17 17728122 17728133 -77544518 - tRNA-Ala-GCY_ tRNA tRNA 0 75 65 3 720 228 67 0 0 chr17 17728133 17728163 -77544488 + (TGG)n Simple_repeat Simple_repeat 3 32 0 3 720 283 264 0 65 chr17 17728163 17728228 -77544423 - tRNA-Ala-GCY_ tRNA tRNA -11 64 4 3 720 345 295 168 17 chr17 17728228 17728518 -77544133 + L1MEf LINE L1 2797 3178 -2968 3 720 2669 51 30 0 chr17 17728878 17729214 -77543437 + ORR1A1 LTR MaLR 1 346 0 3 720 244 119 17 17 chr17 17730653 17730713 -77541938 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 3 720 1204 61 13 0 chr17 17730718 17730897 -77541754 + B2_Mm2 SINE B2 2 193 0 3 720 4722 53 0 7 chr17 17731679 17732266 -77540385 - L1Md_F2 LINE L1 -13 6569 5987 3 720 329 252 145 101 chr17 17732503 17732662 -77539989 + B4 SINE B4 14 179 -113 3 720 582 250 15 38 chr17 17732843 17732976 -77539675 + RSINE1 SINE B4 2 131 -34 3 720 1349 94 17 0 chr17 17733752 17733933 -77538718 - B2_Mm2 SINE B2 -10 185 2 3 720 299 240 65 26 chr17 17733947 17734024 -77538627 + RLTR25B LTR ERVK 430 509 -519 3 720 776 61 0 0 chr17 17733968 17734066 -77538585 + B1_Mm SINE Alu 49 146 -1 3 720 911 110 14 0 chr17 17734068 17734214 -77538437 + (GAAA)n Simple_repeat Simple_repeat 2 149 0 3 720 398 332 118 64 chr17 17734274 17734643 -77538008 + MLT1H LTR MaLR 82 466 -82 3 720 3748 130 48 15 chr17 17734643 17735254 -77537397 + Lx3B LINE L1 6342 6972 -1 3 720 281 285 181 102 chr17 17735254 17735345 -77537306 + MLT1H LTR MaLR 467 541 -7 3 720 237 186 199 29 chr17 17735821 17735919 -77536732 + MIRb SINE MIR 64 175 -93 3 720 270 81 0 0 chr17 17736107 17736144 -77536507 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 3 720 894 126 133 0 chr17 17736144 17736287 -77536364 - B2_Mm2 SINE B2 -33 162 1 3 720 726 204 0 81 chr17 17736424 17736584 -77536067 + B1_Mm SINE Alu 1 147 0 3 720 270 116 0 0 chr17 17736592 17736635 -77536016 + (GGA)n Simple_repeat Simple_repeat 3 45 0 3 720 188 200 0 20 chr17 17736636 17736687 -77535964 + GA-rich Low_complexity Low_complexity 3 52 0 3 720 465 168 59 0 chr17 17736883 17737002 -77535649 - Lx9 LINE L1 0 7644 7519 3 720 371 138 0 44 chr17 17737002 17737093 -77535558 + (TG)n Simple_repeat Simple_repeat 1 87 0 3 720 320 254 66 86 chr17 17737994 17738145 -77534506 - B1F SINE Alu 0 149 2 3 720 201 250 0 42 chr17 17738149 17738245 -77534406 + T-rich Low_complexity Low_complexity 2 93 0 3 720 409 318 66 29 chr17 17738819 17739140 -77533511 + MLT1D LTR MaLR 150 618 -9 3 720 303 314 116 17 chr17 17739278 17739450 -77533201 + Tigger13a DNA MER2_type 284 472 -299 3 720 416 355 80 60 chr17 17739469 17739769 -77532882 + L1MEf LINE L1 127 432 -5768 3 720 447 92 0 0 chr17 17739794 17739859 -77532792 + (CATA)n Simple_repeat Simple_repeat 2 66 0 3 720 551 290 118 77 chr17 17739911 17740251 -77532400 - ORR1E LTR MaLR -4 355 2 3 720 644 285 20 20 chr17 17740251 17740447 -77532204 - MLT1D LTR MaLR -19 486 291 4 720 409 320 52 5 chr17 17740770 17740980 -77531671 + L1MEf LINE L1 467 686 -5514 3 720 586 252 54 29 chr17 17741625 17741829 -77530822 + ORR1D2 LTR MaLR 147 355 -15 4 720 274 320 0 25 chr17 17742268 17742348 -77530303 + B4A SINE B4 215 292 0 4 720 295 249 61 43 chr17 17742425 17742656 -77529995 + L1M5 LINE L1 5256 5490 -674 4 720 302 82 0 39 chr17 17742656 17742707 -77529944 + (TATATG)n Simple_repeat Simple_repeat 2 50 0 4 720 266 215 58 58 chr17 17742719 17742857 -77529794 + L1M5 LINE L1 5549 5686 -478 4 720 26 50 0 0 chr17 17742986 17743026 -77529625 + AT_rich Low_complexity Low_complexity 1 40 0 4 720 24 0 0 0 chr17 17743890 17743914 -77528737 + AT_rich Low_complexity Low_complexity 1 24 0 4 720 919 274 14 48 chr17 17744714 17745067 -77527584 + RLTR15 LTR ERVK 1 341 -18 4 720 324 0 0 0 chr17 17745336 17745372 -77527279 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 720 318 26 0 0 chr17 17745372 17745410 -77527241 + (GA)n Simple_repeat Simple_repeat 1 39 0 4 720 511 275 99 0 chr17 17745469 17745600 -77527051 - B1F2 SINE Alu -5 144 1 4 720 374 235 95 29 chr17 17745821 17745926 -77526725 + MLT1A LTR MaLR 259 370 -4 4 720 1171 62 14 0 chr17 17746442 17746588 -77526063 + B1_Mus1 SINE Alu 1 148 0 4 720 2369 146 56 19 chr17 17746950 17747376 -77525275 + RMER10A LTR ERVL 1 442 0 4 720 990 55 102 0 chr17 17747435 17747563 -77525088 + B1_Mus2 SINE Alu 1 141 -6 4 720 261 0 0 0 chr17 17747565 17747594 -77525057 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 4 720 402 305 86 0 chr17 17747608 17747736 -77524915 + B1F2 SINE Alu 5 143 -6 4 720 409 165 200 0 chr17 17747946 17748031 -77524620 - PB1D7 SINE Alu -1 119 18 4 720 250 318 48 0 chr17 17747982 17748045 -77524606 - B4A SINE B4 -141 151 86 4 720 2653 63 17 30 chr17 17748211 17748573 -77524078 - IAPEY2_LTR LTR ERVK 0 357 1 4 720 29 28 0 0 chr17 17749262 17749298 -77523353 + AT_rich Low_complexity Low_complexity 1 36 0 4 720 928 221 219 10 chr17 17749402 17749712 -77522939 + ORR1C1 LTR MaLR 4 378 0 4 720 1907 182 17 122 chr17 17749731 17750312 -77522339 - Lx6 LINE L1 -1354 6106 5587 4 720 4563 163 71 31 chr17 17750336 17751376 -77521275 - Lx6 LINE L1 -958 4919 3838 4 720 974 245 289 0 chr17 17752055 17752480 -77520171 + Lx8 LINE L1 6924 7471 -2 4 720 1044 105 28 28 chr17 17752677 17752853 -77519798 - B2_Mm2 SINE B2 -18 177 2 4 720 1830 154 31 25 chr17 17752974 17753293 -77519358 + Lx4A LINE L1 6738 7058 0 4 720 22 94 0 0 chr17 17753417 17753481 -77519170 + AT_rich Low_complexity Low_complexity 1 64 0 4 720 653 273 30 65 chr17 17754838 17755069 -77517582 + B4A SINE B4 9 231 -61 4 720 1180 22 0 43 chr17 17755089 17755277 -77517374 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 720 4209 53 0 2 chr17 17756642 17757166 -77515485 + L1Md_F2 LINE L1 6058 6580 -2 4 720 300 83 0 0 chr17 17757410 17757458 -77515193 + (GTTTG)n Simple_repeat Simple_repeat 2 49 0 4 720 503 174 90 75 chr17 17757515 17757664 -77514987 - B1_Mur1 SINE Alu -2 147 1 4 720 228 35 0 0 chr17 17757726 17757755 -77514896 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 720 932 66 0 74 chr17 17759282 17759430 -77513221 + B1_Mm SINE Alu 2 138 -9 4 720 198 0 0 0 chr17 17759430 17759452 -77513199 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 4 720 210 255 0 0 chr17 17760075 17760126 -77512525 + MIR3 SINE MIR 155 205 -3 4 720 194 302 68 17 chr17 17762897 17763015 -77509636 + L2a LINE L2 3057 3180 -246 4 720 406 246 173 53 chr17 17764182 17764458 -77508193 + L1MA5 LINE L1 5598 5900 -256 4 720 686 258 122 31 chr17 17764478 17764798 -77507853 - RLTR15 LTR ERVK 0 359 11 4 720 183 42 0 0 chr17 17764806 17764830 -77507821 + (A)n Simple_repeat Simple_repeat 1 24 0 4 720 1815 178 96 16 chr17 17764989 17765365 -77507286 - RMER16 LTR ERVK 0 533 128 4 720 2159 54 78 41 chr17 17765369 17765723 -77506928 - RLTR10C LTR ERVK -10 355 1 4 720 705 148 23 15 chr17 17765725 17765855 -77506796 - RMER16 LTR ERVK -402 131 1 4 720 475 104 0 0 chr17 17765855 17765932 -77506719 - RMER16-int LTR ERVK 0 5406 5330 4 720 693 167 16 16 chr17 17765988 17766116 -77506535 - RMER16 LTR ERVK -405 128 1 4 720 1061 267 112 22 chr17 17766117 17766484 -77506167 - Lx8 LINE L1 -802 6671 6272 4 720 757 242 67 37 chr17 17766481 17766751 -77505900 + Lx8 LINE L1 5412 5689 -191 4 720 249 327 10 10 chr17 17766754 17766856 -77505795 + Lx8 LINE L1 6159 6260 -1213 4 720 1250 64 70 0 chr17 17767144 17767316 -77505335 + B2_Mm1a SINE B2 1 184 -9 4 720 230 208 0 19 chr17 17767322 17767376 -77505275 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 4 720 3746 148 11 50 chr17 17768188 17768941 -77503710 + L1_Mm LINE L1 4525 5247 -636 4 720 344 242 61 0 chr17 17768943 17769042 -77503609 + RLTR22_Mur LTR ERVK 1610 1714 -134 4 720 1106 139 75 0 chr17 17769825 17770012 -77502639 - B3 SINE B2 0 216 16 4 720 582 15 0 0 chr17 17770346 17770413 -77502238 + (GA)n Simple_repeat Simple_repeat 1 67 0 4 720 388 250 11 11 chr17 17770413 17770506 -77502145 + RLTR20C LTR ERVK 442 534 0 4 720 326 260 20 20 chr17 17770667 17770769 -77501882 - RLTR11A2 LTR ERVK -186 341 240 4 720 210 215 98 37 chr17 17771643 17771725 -77500926 - MIRc SINE MIR -29 239 153 4 720 375 231 99 27 chr17 17772175 17772286 -77500365 + MT2B LTR ERVL 139 257 -344 4 720 814 93 0 41 chr17 17772213 17772320 -77500331 + B1_Mus1 SINE Alu 31 135 -13 4 720 222 62 0 0 chr17 17772320 17772352 -77500299 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4 720 814 93 0 41 chr17 17772352 17772367 -77500284 + B1_Mus1 SINE Alu 136 148 0 4 720 240 296 87 28 chr17 17773310 17773426 -77499225 - MIRc SINE MIR -85 183 54 4 720 795 304 59 74 chr17 17774365 17774685 -77497966 + ORR1E LTR MaLR 3 317 -42 4 720 1184 218 127 85 chr17 17774685 17774888 -77497763 - ORR1D2 LTR MaLR 0 370 166 4 720 1113 111 0 0 chr17 17774888 17775215 -77497436 + (GA)n Simple_repeat Simple_repeat 1 327 0 4 720 1184 218 127 85 chr17 17775215 17775339 -77497312 - ORR1D2 LTR MaLR -205 165 26 4 720 216 86 0 0 chr17 17775356 17775391 -77497260 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 4 720 1238 27 7 0 chr17 17775391 17775537 -77497114 - B1_Mm SINE Alu 0 147 1 4 720 293 111 0 0 chr17 17775561 17775606 -77497045 + ORR1E LTR MaLR 335 379 0 4 720 1231 158 46 9 chr17 17775790 17776007 -77496644 + URR1B DNA MER1_type 1 225 0 4 720 378 0 0 0 chr17 17776315 17776357 -77496294 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 4 720 1149 50 0 21 chr17 17776359 17776503 -77496148 - B1_Mus2 SINE Alu -6 141 1 4 720 206 333 75 19 chr17 17777371 17777478 -77495173 + MER5A DNA MER1_type 8 120 -69 4 720 473 308 17 28 chr17 17777728 17777968 -77494683 + Lx7 LINE L1 7100 7324 -372 4 720 947 250 45 45 chr17 17778242 17778594 -77494057 - RLTR15 LTR ERVK -7 352 1 4 720 39 22 0 0 chr17 17779096 17779142 -77493509 + AT_rich Low_complexity Low_complexity 1 46 0 4 720 261 360 119 34 chr17 17779908 17780144 -77492507 + L2 LINE L2 2691 2946 -473 4 720 1368 74 0 6 chr17 17780744 17780921 -77491730 - B2_Mm2 SINE B2 -19 176 1 4 720 1290 51 6 38 chr17 17781156 17781339 -77491312 + L1_Mus1 LINE L1 6391 6567 0 4 720 1143 41 0 52 chr17 17781823 17781977 -77490674 - B1_Mm SINE Alu 0 147 2 4 720 3757 144 12 26 chr17 17783144 17783807 -77488844 - RMER12 LTR ERVK -581 741 88 4 720 240 205 38 71 chr17 17784608 17784792 -77487859 + (TATAA)n Simple_repeat Simple_repeat 1 178 0 4 720 413 387 1 60 chr17 17784998 17785222 -77487429 + B3A SINE B2 3 214 -2 4 720 22 0 0 0 chr17 17785254 17785276 -77487375 + AT_rich Low_complexity Low_complexity 1 22 0 4 720 198 0 0 0 chr17 17785633 17785655 -77486996 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 4 720 940 42 8 0 chr17 17785655 17785775 -77486876 - B1_Mm SINE Alu -12 135 15 4 720 324 0 0 0 chr17 17786895 17786931 -77485720 + (CAA)n Simple_repeat Simple_repeat 3 38 0 4 720 270 0 0 0 chr17 17786970 17787000 -77485651 + (CAA)n Simple_repeat Simple_repeat 2 31 0 4 720 230 336 206 0 chr17 17787504 17787635 -77485016 + MER5A DNA MER1_type 1 158 -31 4 720 369 0 0 0 chr17 17787699 17787740 -77484911 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 720 775 312 65 25 chr17 17788294 17788674 -77483977 - Lx8 LINE L1 -25 7448 7041 4 720 543 245 194 32 chr17 17788674 17788760 -77483891 + RLTR15 LTR ERVK 1 101 -258 4 720 878 122 7 0 chr17 17788760 17788908 -77483743 + (GA)n Simple_repeat Simple_repeat 2 150 0 4 720 543 245 194 32 chr17 17788908 17789099 -77483552 + RLTR15 LTR ERVK 102 322 -37 4 720 425 270 52 35 chr17 17789327 17789442 -77483209 + MLT1G LTR MaLR 400 516 -75 4 720 348 143 0 0 chr17 17789889 17789959 -77482692 + (A)n Simple_repeat Simple_repeat 1 70 0 4 720 268 152 30 0 chr17 17790454 17790520 -77482131 + (TA)n Simple_repeat Simple_repeat 1 68 0 4 720 21 0 0 0 chr17 17790742 17790763 -77481888 + AT_rich Low_complexity Low_complexity 1 21 0 4 720 11601 85 16 78 chr17 17792386 17792900 -77479751 - RLTR22_Mur LTR ERVK 0 1848 1344 4 720 351 0 0 0 chr17 17792900 17792939 -77479712 + (TC)n Simple_repeat Simple_repeat 1 39 0 4 720 11601 85 16 78 chr17 17792939 17794393 -77478258 - RLTR22_Mur LTR ERVK -505 1343 1 4 720 18164 77 17 8 chr17 17795852 17799164 -77473487 + L1VL4 LINE L1 219 3559 0 4 720 1975 101 37 30 chr17 17800136 17800464 -77472187 + Lx2 LINE L1 6668 6997 0 4 720 2739 59 40 5 chr17 17800494 17800868 -77471783 + MTA_Mm LTR MaLR 1 387 -9 4 720 574 219 17 9 chr17 17800875 17800990 -77471661 - B3A SINE B2 -81 117 2 4 720 256 363 40 27 chr17 17801368 17801518 -77471133 - MIRb SINE MIR -31 237 86 4 720 180 0 0 0 chr17 17801908 17801928 -77470723 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 720 568 318 63 23 chr17 17802817 17802991 -77469660 - B4A SINE B4 -2 290 110 4 720 558 262 168 42 chr17 17803526 17803902 -77468749 + RMER2 LTR ERV1 1 336 -231 4 720 465 285 109 24 chr17 17805112 17805450 -77467201 + MuRRS4-int LTR ERV1 1041 1407 -3656 4 720 311 359 0 39 chr17 17805765 17805968 -77466683 + RLTR6-int LTR ERV1 3129 3323 -4283 5 720 337 333 59 42 chr17 17806357 17806499 -77466152 + RLTR6-int LTR ERV1 4344 4430 -3348 5 720 2012 133 15 30 chr17 17806499 17806831 -77465820 + ORR1A2 LTR MaLR 1 327 0 5 720 337 359 5 37 chr17 17806831 17806929 -77465722 + RLTR6-int LTR ERV1 4431 4528 -3250 5 720 1631 169 71 12 chr17 17807050 17807386 -77465265 - RLTR18 LTR ERVK 0 616 261 5 720 716 232 108 30 chr17 17807380 17807611 -77465040 + RMER10A LTR ERVL 171 419 -23 5 720 1008 59 235 7 chr17 17807613 17807766 -77464885 - B2_Mm2 SINE B2 -7 188 1 5 720 1143 119 0 0 chr17 17807771 17807947 -77464704 + (TTC)n Simple_repeat Simple_repeat 2 177 0 5 720 6135 70 7 1 chr17 17808739 17809545 -77463106 + L1_Mus1 LINE L1 5757 6567 0 5 720 444 67 0 0 chr17 17809595 17809655 -77462996 + (TA)n Simple_repeat Simple_repeat 1 60 0 5 720 704 331 42 13 chr17 17809870 17810250 -77462401 - Lx6 LINE L1 -11 7449 7059 5 720 2029 289 48 45 chr17 17810303 17811327 -77461324 - Lx6 LINE L1 -824 6636 5610 5 720 1813 141 18 60 chr17 17811331 17811664 -77460987 - ORR1A2 LTR MaLR -8 319 1 5 720 5944 64 6 66 chr17 17811672 17812526 -77460125 - RLTR13B4 LTR ERVK 0 803 1 5 720 3251 242 69 66 chr17 17812530 17813454 -77459197 - Lx6 LINE L1 -275 5605 4709 5 720 1248 78 32 27 chr17 17813454 17813639 -77459012 - B2_Mm2 SINE B2 -7 188 3 5 720 3251 242 69 66 chr17 17813639 17814165 -77458486 - Lx6 LINE L1 -1172 4708 4151 5 720 1707 217 15 18 chr17 17814180 17814635 -77458016 - L1VL2 LINE L1 -5437 898 445 5 720 233 232 113 60 chr17 17814669 17814820 -77457831 - L1VL2 LINE L1 -6027 308 150 5 720 201 74 0 0 chr17 17817613 17817640 -77455011 + (T)n Simple_repeat Simple_repeat 1 27 0 5 720 38902 13 1 6 chr17 17817642 17824000 -77448651 - L1Md_A LINE L1 -1 6581 259 5 720 240 35 0 0 chr17 17824152 17824181 -77448470 + (A)n Simple_repeat Simple_repeat 1 29 0 5 720 446 315 34 9 chr17 17824372 17824578 -77448073 + MT2A LTR ERVL 347 601 0 5 720 2393 213 110 7 chr17 17824730 17825330 -77447321 + Lx4A LINE L1 6394 7055 -3 5 720 237 108 0 0 chr17 17825340 17825377 -77447274 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 5 11 4078 52 55 2 chr17 17825422 17825945 -77446706 + L1_Mus2 LINE L1 6016 6566 0 5 721 204 158 0 0 chr17 17826549 17826587 -77446064 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 721 4074 218 58 51 chr17 17826810 17827029 -77445622 - RLTR25A LTR ERVK 0 1103 886 5 721 308 77 19 0 chr17 17827029 17827081 -77445570 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 721 4074 218 58 51 chr17 17827081 17827954 -77444697 - RLTR25A LTR ERVK -218 885 4 5 721 3261 166 64 12 chr17 17827979 17828962 -77443689 - Lx4A LINE L1 -879 6179 5141 5 721 8656 85 37 47 chr17 17828959 17830471 -77442180 + Lx3_Mus LINE L1 5501 7009 0 5 721 228 35 0 0 chr17 17830500 17830529 -77442122 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 5 721 2839 157 32 83 chr17 17830536 17830732 -77441919 - Lx4A LINE L1 -728 5149 4996 5 721 1204 49 0 0 chr17 17830732 17830874 -77441777 - B1_Mus1 SINE Alu -6 142 1 5 721 2839 157 32 83 chr17 17830874 17831373 -77441278 - Lx4A LINE L1 -882 4995 4490 5 721 1442 246 38 5 chr17 17831369 17831786 -77440865 - Lx2B LINE L1 -413 6587 6157 5 721 7375 63 0 1 chr17 17831785 17832800 -77439851 - L1_Mm LINE L1 -2464 3419 2406 5 721 529 31 0 0 chr17 17832802 17832866 -77439785 + L1Md_F2 LINE L1 6203 6266 -316 5 721 17048 58 2 13 chr17 17832863 17835222 -77437429 + L1Md_F2 LINE L1 3253 5585 -298 5 721 7131 64 47 9 chr17 17835223 17836183 -77436468 + L1Md_F2 LINE L1 5587 6582 0 5 721 264 331 8 8 chr17 17836256 17836390 -77436261 - MuRRS-int LTR ERV1 -1942 2748 2615 5 721 1812 45 36 24 chr17 17836938 17837187 -77435464 + L1Md_F3 LINE L1 6333 6584 0 5 721 302 314 12 60 chr17 17837654 17837820 -77434831 - MuRRS-int LTR ERV1 -2718 1972 1815 5 721 276 30 0 0 chr17 17839202 17839235 -77433416 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 5 721 719 316 41 38 chr17 17839674 17840013 -77432638 - RLTR23 LTR ERV1 0 430 91 5 721 437 224 0 0 chr17 17840107 17840192 -77432459 - RLTR23 LTR ERV1 -340 90 6 5 721 5611 202 35 8 chr17 17841188 17842890 -77429761 - Lx2B LINE L1 -85 6915 5159 5 721 533 159 9 26 chr17 17842896 17843012 -77429639 + L1_Mur2 LINE L1 2289 2402 -3475 5 721 6441 97 10 9 chr17 17843013 17843978 -77428673 - L1_Mus4 LINE L1 0 6636 5671 5 721 6233 73 5 0 chr17 17843978 17844832 -77427819 + L1_Mus2 LINE L1 5709 6566 0 5 721 221 0 35 0 chr17 17844853 17844882 -77427769 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 5 721 1321 137 0 0 chr17 17844882 17845093 -77427558 - L1_Mm LINE L1 -206 5677 5467 5 721 259 292 27 45 chr17 17845172 17845283 -77427368 - PB1D9 SINE Alu -1 119 8 5 721 25 51 0 0 chr17 17845427 17845466 -77427185 + AT_rich Low_complexity Low_complexity 1 39 0 5 721 38 0 0 0 chr17 17845812 17845850 -77426801 + AT_rich Low_complexity Low_complexity 1 38 0 5 721 28 61 0 0 chr17 17845959 17846008 -77426643 + AT_rich Low_complexity Low_complexity 1 49 0 5 721 321 411 24 5 chr17 17846187 17846559 -77426092 - Lx8 LINE L1 -236 7237 6859 5 721 1575 151 43 0 chr17 17846571 17846870 -77425781 - L1_Mur2 LINE L1 -3048 2829 2518 5 721 628 143 6 0 chr17 17846864 17846988 -77425663 + Lx2B LINE L1 5802 5929 -1079 5 721 363 192 0 0 chr17 17846989 17847067 -77425584 + Lx4B LINE L1 5893 5970 -1088 5 721 23 68 0 0 chr17 17847161 17847205 -77425446 + AT_rich Low_complexity Low_complexity 1 44 0 5 721 32 26 0 0 chr17 17847215 17847254 -77425397 + AT_rich Low_complexity Low_complexity 1 39 0 5 721 408 252 0 29 chr17 17847483 17847585 -77425066 + B1F2 SINE Alu 41 139 -10 5 721 341 268 113 0 chr17 17847794 17847891 -77424760 + B1F2 SINE Alu 5 112 -37 5 721 1427 244 48 80 chr17 17848033 17848654 -77423997 + RMER6C LTR ERVK 108 687 -3 5 721 361 175 0 0 chr17 17850632 17850695 -77421956 + B1_Mus1 SINE Alu 2 64 -84 5 721 285 260 40 40 chr17 17850695 17850732 -77421919 + B4A SINE B4 87 186 -106 5 721 747 130 0 43 chr17 17850735 17850896 -77421755 - Lx2B LINE L1 -807 6193 6040 5 721 10133 189 25 11 chr17 17850900 17851126 -77421525 - L1_Mur1 LINE L1 -1812 4074 3841 5 721 4297 145 57 93 chr17 17851126 17852062 -77420589 - RMER17A2 LTR ERVK -4 902 1 5 721 10133 189 25 11 chr17 17852062 17854173 -77418478 - L1_Mur1 LINE L1 -2046 3840 1704 5 721 1443 154 70 30 chr17 17854199 17854501 -77418150 - Lx2 LINE L1 0 6997 6684 5 721 3327 164 24 7 chr17 17854471 17855321 -77417330 - Lx2 LINE L1 -769 6228 5359 5 721 7410 160 5 36 chr17 17855316 17857783 -77414868 - L1_Mus3 LINE L1 0 6638 4261 5 721 732 135 60 0 chr17 17857785 17857918 -77414733 - URR1A DNA MER1_type -24 202 62 5 721 7292 80 1 1 chr17 17858059 17859455 -77413196 - L1_Mus1 LINE L1 -8 6559 5164 5 721 6314 71 3 1 chr17 17859587 17860433 -77412218 - L1VL1 LINE L1 -5388 1034 187 5 721 1340 158 80 17 chr17 17860444 17860746 -77411905 - Lx LINE L1 -7 6647 6327 5 721 693 120 26 0 chr17 17860750 17860867 -77411784 + MusHAL1 LINE L1 1361 1480 -1232 5 721 7148 185 39 33 chr17 17860868 17863028 -77409623 - L1VL4 LINE L1 -1341 2274 97 5 721 2271 64 0 0 chr17 17863205 17863502 -77409149 - L1_Mus1 LINE L1 -672 5895 5599 5 721 1166 87 0 0 chr17 17863502 17863663 -77408988 + L1_Mus1 LINE L1 6407 6567 0 5 721 29 0 0 0 chr17 17864137 17864166 -77408485 + AT_rich Low_complexity Low_complexity 1 29 0 5 721 537 351 58 18 chr17 17864318 17864660 -77407991 - MTEb LTR MaLR 0 379 24 5 721 586 330 25 11 chr17 17865639 17865924 -77406727 - Lx6 LINE L1 -10 7450 7162 5 721 5517 108 12 2 chr17 17865932 17866768 -77405883 - L1_Mus2 LINE L1 -1 6565 5722 5 721 5746 107 1 0 chr17 17866766 17867638 -77405013 - L1_Mus2 LINE L1 -612 5271 4399 5 721 3164 195 26 33 chr17 17867637 17868341 -77404310 - L1_Mur2 LINE L1 -5873 839 141 5 721 744 62 0 0 chr17 17868528 17868625 -77404026 - L1Md_F2 LINE L1 -562 6020 5924 5 721 4394 85 2 10 chr17 17868625 17869231 -77403420 + L1Md_F2 LINE L1 5982 6582 0 5 721 618 153 0 0 chr17 17869231 17869244 -77403407 - L1Md_F2 LINE L1 -660 5922 5910 5 721 1384 239 42 49 chr17 17869280 17869700 -77402951 - RLTR1B LTR ERV1 -17 495 62 5 721 23 68 0 0 chr17 17871115 17871159 -77401492 + AT_rich Low_complexity Low_complexity 1 44 0 5 721 3765 69 0 0 chr17 17871191 17871697 -77400954 + L1_Mm LINE L1 4761 5266 -617 5 721 450 0 0 0 chr17 17871771 17871821 -77400830 + (TTTAA)n Simple_repeat Simple_repeat 3 52 0 5 721 1181 68 0 0 chr17 17871821 17871967 -77400684 - B1_Mus1 SINE Alu -1 147 2 5 721 214 50 24 24 chr17 17871967 17872008 -77400643 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 5 721 783 212 77 39 chr17 17874146 17874340 -77398311 + L1_Mur2 LINE L1 2269 2463 -3414 5 721 3186 91 7 2 chr17 17874340 17874791 -77397860 + L1_Mus2 LINE L1 6113 6565 -1 5 721 783 212 77 39 chr17 17874791 17874802 -77397849 + L1_Mur2 LINE L1 2464 2478 -3399 5 721 1507 59 0 0 chr17 17874802 17874988 -77397663 + B2_Mm1t SINE B2 2 187 -6 5 721 783 212 77 39 chr17 17874988 17875041 -77397610 + L1_Mur2 LINE L1 2479 2537 -3340 5 721 541 303 92 21 chr17 17875147 17875538 -77397113 - Lx9 LINE L1 -1679 5965 5516 5 721 3023 136 33 18 chr17 17875538 17876047 -77396604 + Lx LINE L1 6137 6653 -1 5 721 29 28 0 0 chr17 17876049 17876085 -77396566 + AT_rich Low_complexity Low_complexity 1 36 0 5 721 324 250 0 24 chr17 17876119 17876201 -77396450 - Lx9 LINE L1 -321 5526 5447 5 721 2425 121 30 20 chr17 17876209 17876614 -77396037 - RLTR9E LTR ERVK 0 409 1 5 721 376 155 0 40 chr17 17876616 17876690 -77395961 - ETnERV2-int LTR ERVK -3 7403 7333 5 721 17482 103 8 5 chr17 17876909 17879618 -77393033 - ETnERV2-int LTR ERVK -984 6422 3759 5 721 6208 65 12 7 chr17 17879621 17880546 -77392105 - L1Md_F2 LINE L1 0 6582 5730 5 721 1077 125 16 0 chr17 17880546 17880730 -77391921 - ETnERV2-int LTR ERVK -3654 3752 3566 5 721 7057 79 4 3 chr17 17880739 17882293 -77390358 - L1Md_F2 LINE L1 -12 6570 5014 5 721 3488 90 2 0 chr17 17882292 17882801 -77389850 + L1Md_F2 LINE L1 4504 5013 -870 5 721 3155 307 64 30 chr17 17882856 17884432 -77388219 - MYSERV6-int LTR ERVK -6879 2080 452 5 721 642 156 0 23 chr17 17885207 17885338 -77387313 - Lx LINE L1 -2 6652 6525 5 721 215 138 33 49 chr17 17885376 17885437 -77387214 + T-rich Low_complexity Low_complexity 1 60 0 5 721 234 128 0 0 chr17 17885449 17885488 -77387163 + (T)n Simple_repeat Simple_repeat 1 39 0 5 721 1141 95 0 0 chr17 17885491 17885639 -77387012 - B1_Mus1 SINE Alu 0 148 1 5 721 6064 58 11 5 chr17 17885655 17886442 -77386209 - L1Md_F2 LINE L1 0 6582 5791 5 721 207 0 0 0 chr17 17886934 17886957 -77385694 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 721 633 201 375 0 chr17 17887021 17887283 -77385368 - BGLII_B LTR ERVK 0 441 82 5 721 475 257 12 6 chr17 17887295 17887467 -77385184 + L1_Mur1 LINE L1 4483 4655 -1231 5 721 4796 86 11 8 chr17 17888287 17889034 -77383617 - MusHAL1 LINE L1 -1575 1137 389 5 721 803 215 73 27 chr17 17889034 17889254 -77383397 - RLTR22_Mur LTR ERVK -1618 230 1 6 721 388 297 43 16 chr17 17889338 17889526 -77383125 - L1_Rod LINE L1 -6651 521 329 6 721 4267 152 18 4 chr17 17889678 17890386 -77382265 + Lx4A LINE L1 6339 7056 -2 6 721 50 0 0 0 chr17 17890391 17890441 -77382210 + AT_rich Low_complexity Low_complexity 1 50 0 6 721 666 37 0 0 chr17 17890478 17890559 -77382092 + (AATAG)n Simple_repeat Simple_repeat 4 84 0 6 721 548 107 0 10 chr17 17891167 17891271 -77381380 + (CAAAC)n Simple_repeat Simple_repeat 2 104 0 6 721 3884 133 26 7 chr17 17892138 17892745 -77379906 - Lx2A LINE L1 -10 6998 6380 6 721 249 269 127 30 chr17 17893353 17893487 -77379164 + MMSAT4 Satellite Satellite 8 154 -14 6 721 565 243 175 11 chr17 17893689 17893863 -77378788 + RMER19B LTR ERVK 305 508 -394 6 721 1006 214 48 13 chr17 17893863 17894090 -77378561 + RMER12 LTR ERVK 1 235 -1087 6 721 21475 160 35 10 chr17 17894090 17896470 -77376181 - Lx LINE L1 -753 5901 3475 6 721 180 0 0 0 chr17 17896470 17896490 -77376161 + (TGG)n Simple_repeat Simple_repeat 3 22 0 6 721 21475 170 40 11 chr17 17896490 17896797 -77375854 - Lx LINE L1 -2409 3474 3168 6 721 215 31 31 0 chr17 17896797 17896829 -77375822 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 721 21475 177 43 35 chr17 17896829 17899815 -77372836 - Lx LINE L1 -2716 3167 308 6 721 4960 206 98 37 chr17 17899815 17899981 -77372670 + RLTR22_Mus LTR ERVK 264 442 -1366 6 721 294 29 0 0 chr17 17899981 17900016 -77372635 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 6 721 4960 206 98 37 chr17 17900016 17901266 -77371385 + RLTR22_Mus LTR ERVK 443 1765 -43 6 721 1411 226 21 27 chr17 17901288 17901620 -77371031 + RMER19C LTR ERVK 282 611 0 6 721 21 57 0 0 chr17 17902603 17902638 -77370013 + AT_rich Low_complexity Low_complexity 1 35 0 6 721 359 247 81 93 chr17 17903419 17903580 -77369071 + RLTR14 LTR ERV1 224 382 0 6 721 409 255 33 103 chr17 17903597 17903781 -77368870 - B2_Mm2 SINE B2 -24 171 1 6 721 7612 29 0 0 chr17 17906258 17907184 -77365467 - L1Md_T LINE L1 -2 6580 5655 6 721 648 189 15 0 chr17 17907308 17907440 -77365211 + Lx5 LINE L1 6914 7047 -3 6 721 22 0 0 0 chr17 17908101 17908123 -77364528 + AT_rich Low_complexity Low_complexity 1 22 0 6 721 2055 204 32 0 chr17 17908128 17908530 -77364121 + MTC LTR MaLR 5 419 -2 6 721 3738 93 45 5 chr17 17909251 17909834 -77362817 + Lx3A LINE L1 5627 6232 -749 6 721 648 115 17 5 chr17 17909835 17909945 -77362706 + ORR1A3 LTR MaLR 222 374 0 6 721 1148 281 18 3 chr17 17909948 17910335 -77362316 + RMER1B Other Other 147 736 -330 6 721 378 94 0 0 chr17 17910335 17910399 -77362252 + L1_Mus3 LINE L1 6573 6636 -2 6 721 24 32 0 0 chr17 17910399 17910430 -77362221 + AT_rich Low_complexity Low_complexity 1 31 0 6 721 328 353 31 61 chr17 17910469 17910488 -77362163 + ID_B1 SINE B4 67 220 0 6 721 513 256 21 21 chr17 17910488 17910628 -77362023 + B1_Mur4 SINE Alu 11 150 0 6 721 201 154 0 0 chr17 17910634 17910673 -77361978 + GA-rich Low_complexity Low_complexity 2 40 0 6 721 216 0 0 0 chr17 17910745 17910769 -77361882 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 6 721 4280 103 36 5 chr17 17910769 17911403 -77361248 - Lx3A LINE L1 -15 6966 6313 6 721 1344 118 15 0 chr17 17911403 17911606 -77361045 - ORR1A2 LTR MaLR -121 206 1 6 721 7127 109 43 1 chr17 17911606 17912712 -77359939 - ORR1A2-int LTR MaLR 0 1963 811 6 721 248 299 0 83 chr17 17912674 17912758 -77359893 - B1_Mus2 SINE Alu -22 125 49 6 721 8576 116 12 3 chr17 17912758 17914137 -77358514 + Lx3A LINE L1 5588 6979 -2 6 721 1679 170 96 12 chr17 17914149 17914565 -77358086 + L1_Mur3 LINE L1 1585 2035 -3845 6 721 7332 82 11 0 chr17 17914552 17916116 -77356535 + L1_Mus1 LINE L1 4983 6567 0 6 721 1452 219 63 18 chr17 17916121 17916516 -77356135 + L1_Mur3 LINE L1 2006 2418 -3462 6 721 1247 100 0 43 chr17 17916520 17916729 -77355922 - L1_Mus4 LINE L1 0 6636 6437 6 721 4028 137 10 36 chr17 17916730 17917527 -77355124 + L1_Mur1 LINE L1 3211 3986 -1900 6 721 1381 287 49 29 chr17 17917530 17918121 -77354530 - Lx6 LINE L1 -23 7437 6456 6 721 3628 163 20 37 chr17 17918135 17918951 -77353700 + L1_Mur3 LINE L1 2406 3207 -2673 6 721 2173 219 42 32 chr17 17918951 17919451 -77353200 - RLTR11A LTR ERVK 0 528 24 6 721 6962 176 43 137 chr17 17919475 17920107 -77352544 + L1_Mur3 LINE L1 3201 3858 -2022 6 721 1100 218 21 34 chr17 17920107 17920340 -77352311 + 7SK RNA RNA 26 255 -76 6 721 6962 176 43 137 chr17 17920340 17921073 -77351578 + L1_Mur3 LINE L1 3859 4624 -1256 6 721 429 20 0 0 chr17 17921073 17921123 -77351528 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 721 6962 176 43 137 chr17 17921123 17921155 -77351496 + L1_Mur3 LINE L1 4625 4634 -1246 6 721 4171 55 19 0 chr17 17921155 17921679 -77350972 - L1_Mus1 LINE L1 0 6567 6034 6 721 6962 176 43 137 chr17 17921679 17921787 -77350864 + L1_Mur3 LINE L1 4635 4735 -1145 6 721 342 0 0 0 chr17 17921787 17921825 -77350826 + (CTA)n Simple_repeat Simple_repeat 3 40 0 6 721 6962 176 43 137 chr17 17921825 17921899 -77350752 + L1_Mur3 LINE L1 4736 4800 -1080 6 721 631 178 34 20 chr17 17921899 17922048 -77350603 + Lx3_Mus LINE L1 6851 7001 -8 6 721 6962 176 43 137 chr17 17922048 17922498 -77350153 + L1_Mur3 LINE L1 4801 5252 -628 6 721 4581 211 35 21 chr17 17922486 17923518 -77349133 + Lx6 LINE L1 6405 7450 -10 6 721 1816 179 44 58 chr17 17924046 17924349 -77348302 - RLTR22_Mur LTR ERVK -537 1311 1013 6 721 1357 98 0 10 chr17 17924349 17924545 -77348106 - B2_Mm2 SINE B2 0 195 2 6 721 1816 220 72 53 chr17 17924545 17924861 -77347790 - RLTR22_Mur LTR ERVK -836 1012 622 6 721 222 204 0 20 chr17 17924884 17924934 -77347717 + GA-rich Low_complexity Low_complexity 1 49 0 6 721 242 179 0 18 chr17 17924934 17924991 -77347660 + A-rich Low_complexity Low_complexity 4 59 0 6 721 588 143 0 0 chr17 17924977 17925075 -77347576 + (GGGGA)n Simple_repeat Simple_repeat 3 100 0 6 721 1597 192 43 40 chr17 17925516 17925912 -77346739 - RMER3D-int LTR ERVK -1299 1543 1147 6 721 1118 208 32 40 chr17 17925907 17926450 -77346201 - RMER3D-int LTR ERVK -2203 639 163 6 721 307 179 0 0 chr17 17926496 17926552 -77346099 - RMER3D-int LTR ERVK -2786 56 1 6 721 636 226 31 0 chr17 17926577 17926736 -77345915 - RLTR17 LTR ERVK -60 632 469 6 721 469 278 126 0 chr17 17926769 17926920 -77345731 - RLTR17 LTR ERVK -302 390 221 6 721 1743 256 69 37 chr17 17926946 17927806 -77344845 - L1_Rod LINE L1 -3497 2350 1464 6 721 1778 190 89 85 chr17 17927809 17928303 -77344348 - RMER19C LTR ERVK 0 611 116 6 721 548 250 25 0 chr17 17928302 17928422 -77344229 - RSINE1 SINE B4 -40 125 3 6 721 224 246 33 0 chr17 17928723 17928784 -77343867 + CT-rich Low_complexity Low_complexity 2 64 0 6 721 203 200 20 20 chr17 17929205 17929256 -77343395 + GA-rich Low_complexity Low_complexity 4 54 0 6 721 671 299 106 52 chr17 17929555 17929922 -77342729 - Lx8 LINE L1 -55 7418 7032 6 721 668 268 88 29 chr17 17929941 17930145 -77342506 - B4A SINE B4 -76 216 1 6 721 321 205 13 148 chr17 17930165 17930320 -77342331 - Lx7 LINE L1 0 7696 7563 6 721 399 196 108 0 chr17 17930690 17930792 -77341859 + Lx6 LINE L1 4818 4930 -947 6 721 2309 111 6 0 chr17 17930796 17931121 -77341530 - ORR1A2 LTR MaLR 0 327 1 6 721 7215 114 28 17 chr17 17931121 17932284 -77340367 - ORR1A2-int LTR MaLR 0 1963 788 6 721 1080 175 63 22 chr17 17932284 17932553 -77340098 + Lx6 LINE L1 4934 5213 -664 6 721 1585 247 56 61 chr17 17932571 17933164 -77339487 - RLTR26 LTR ERVK -18 624 5 6 721 262 187 13 13 chr17 17933175 17933251 -77339400 + Lx6 LINE L1 5211 5286 -591 6 721 319 329 47 0 chr17 17933259 17933408 -77339243 + Lx6 LINE L1 7239 7394 -66 6 721 31 76 0 0 chr17 17933416 17933482 -77339169 + AT_rich Low_complexity Low_complexity 1 66 0 6 721 1836 243 76 9 chr17 17933742 17934352 -77338299 + Lx6 LINE L1 5700 6391 -667 6 721 1448 272 61 15 chr17 17934380 17934888 -77337763 + Lx6 LINE L1 6506 7414 -46 6 721 8457 222 73 35 chr17 17935010 17936594 -77336057 - L1_Mur3 LINE L1 -747 5133 3507 6 721 1069 113 0 0 chr17 17936594 17936735 -77335916 + B1_Mus2 SINE Alu 1 141 -6 6 721 8457 222 73 35 chr17 17936735 17937482 -77335169 - L1_Mur3 LINE L1 -2374 3506 2709 6 721 3325 70 36 25 chr17 17937482 17937952 -77334699 - MT2C_Mm LTR ERVL 0 475 1 6 721 8457 222 73 35 chr17 17937952 17938340 -77334311 - L1_Mur3 LINE L1 -3172 2708 2309 6 721 1163 186 24 0 chr17 17938339 17938611 -77334040 + L1_Mur2 LINE L1 4884 5176 -704 6 721 584 157 8 16 chr17 17938611 17938734 -77333917 - L1_Mur3 LINE L1 -1881 3999 3878 6 721 662 294 14 81 chr17 17938734 17938945 -77333706 - B3A SINE B2 0 198 2 6 721 812 239 77 112 chr17 17938945 17939283 -77333368 - RCHARR1 DNA MER1_type -280 694 369 6 721 636 225 234 7 chr17 17939419 17939714 -77332937 + Lx9 LINE L1 7257 7618 -26 6 721 1110 289 90 6 chr17 17939768 17940102 -77332549 - MTD LTR MaLR -57 362 1 6 721 522 199 201 5 chr17 17940102 17940311 -77332340 - MTD-int LTR MaLR 0 1258 1010 6 721 1341 55 32 87 chr17 17940311 17940530 -77332121 + L1_Mus2 LINE L1 6360 6566 0 6 721 293 305 121 25 chr17 17940530 17940563 -77332088 - MTD-int LTR MaLR -231 1349 1315 6 721 343 264 74 33 chr17 17940643 17940886 -77331765 + RMER17C LTR ERVK 1 253 -157 6 721 721 131 19 39 chr17 17940893 17941153 -77331498 + CT-rich Low_complexity Low_complexity 1 254 0 6 721 536 267 60 74 chr17 17941156 17941455 -77331196 + RMER17C LTR ERVK 84 378 -32 6 721 649 94 9 19 chr17 17941576 17941684 -77330967 + (GAAA)n Simple_repeat Simple_repeat 3 109 0 6 721 1161 219 24 24 chr17 17942345 17942639 -77330012 + Lx5 LINE L1 54 347 -7381 6 721 3920 205 55 38 chr17 17942642 17943723 -77328928 + Lx5 LINE L1 1041 2140 -3740 6 721 513 58 0 0 chr17 17943723 17943792 -77328859 + (TG)n Simple_repeat Simple_repeat 2 70 0 6 721 3920 210 53 47 chr17 17943792 17943984 -77328667 + Lx5 LINE L1 2141 2330 -3550 6 721 1378 194 97 10 chr17 17943992 17944477 -77328174 + Lx5 LINE L1 5181 5790 -1260 6 721 3445 102 8 4 chr17 17944479 17944969 -77327682 + L1_Mus3 LINE L1 6142 6633 -5 6 721 463 196 0 0 chr17 17944969 17945066 -77327585 + L1_Mur2 LINE L1 5175 5271 -606 6 721 418 153 0 53 chr17 17945066 17945142 -77327509 + ORR1C1-int LTR MaLR 879 950 -559 6 721 1142 164 103 5 chr17 17945126 17945340 -77327311 + ORR1C1 LTR MaLR 144 378 0 6 721 2820 195 31 6 chr17 17945343 17945865 -77326786 - RLTR14-int LTR ERV1 -2052 3265 2731 6 721 1913 188 6 18 chr17 17945865 17946206 -77326445 - RLTR14-int LTR ERV1 -2794 2523 2187 6 721 1095 231 20 21 chr17 17946224 17946635 -77326016 - RLTR14-int LTR ERV1 -3121 2196 1876 6 721 3253 53 8 2 chr17 17946635 17947029 -77325622 - MTA_Mm LTR MaLR 0 396 1 6 721 6439 77 54 117 chr17 17947029 17947801 -77324850 - MTA_Mm-int LTR MaLR 0 1098 376 6 721 1218 61 0 0 chr17 17947801 17947948 -77324703 - B1_Mus2 SINE Alu 0 147 1 6 721 6439 77 54 117 chr17 17947948 17947986 -77324665 - MT-int LTR MaLR -723 375 375 6 721 5240 64 28 3 chr17 17947986 17948660 -77323991 - L1Md_F2 LINE L1 0 6582 5892 6 721 6439 77 54 117 chr17 17948660 17949020 -77323631 - MTA_Mm-int LTR MaLR -723 375 1 6 721 3068 58 37 3 chr17 17949020 17949403 -77323248 - MTA_Mm LTR MaLR 0 396 1 6 721 5089 208 73 122 chr17 17949403 17951096 -77321555 - RLTR14-int LTR ERV1 -3437 1880 271 6 721 283 140 0 0 chr17 17951116 17951166 -77321485 - MT2A LTR ERVL 0 533 484 6 721 28 105 0 0 chr17 17951174 17951279 -77321372 + AT_rich Low_complexity Low_complexity 1 105 0 6 721 542 240 136 13 chr17 17951302 17951526 -77321125 - MT2A LTR ERVL -211 282 1 6 721 1092 232 52 32 chr17 17951526 17951775 -77320876 - RLTR14-int LTR ERV1 -5063 254 1 6 721 2116 171 35 3 chr17 17951775 17952145 -77320506 - RLTR14 LTR ERV1 0 382 1 6 721 720 289 0 66 chr17 17952271 17952482 -77320169 + B3A SINE B2 2 198 0 6 721 672 309 5 33 chr17 17952783 17952967 -77319684 + B4A SINE B4 15 193 -99 6 721 303 71 0 0 chr17 17952997 17953039 -77319612 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 721 466 250 17 136 chr17 17953416 17953431 -77319220 - RSINE1 SINE B4 0 165 151 7 721 363 44 0 0 chr17 17953431 17953476 -77319175 + (GA)n Simple_repeat Simple_repeat 1 45 0 7 721 466 250 17 136 chr17 17953476 17953636 -77319015 - RSINE1 SINE B4 -15 150 11 7 721 389 252 106 8 chr17 17953675 17953807 -77318844 - L1MEe LINE L1 -4100 754 610 7 721 1180 91 6 17 chr17 17954118 17954297 -77318354 + B2_Mm2 SINE B2 19 195 0 7 721 965 266 66 121 chr17 17954622 17954985 -77317666 + MTE2a LTR MaLR 7 349 -30 7 721 455 250 128 54 chr17 17954999 17955093 -77317558 - B4A SINE B4 -68 224 133 7 721 823 96 0 22 chr17 17955093 17955231 -77317420 + (TTCC)n Simple_repeat Simple_repeat 1 135 0 7 721 455 250 128 54 chr17 17955231 17955339 -77317312 - B4A SINE B4 -160 132 8 7 721 1422 244 63 8 chr17 17955342 17955693 -77316958 + ORR1D2 LTR MaLR 1 370 0 7 721 593 210 8 0 chr17 17956345 17956464 -77316187 + ID_B1 SINE B4 102 221 -3 7 721 775 234 53 11 chr17 17956555 17956745 -77315906 + B3 SINE B2 16 213 -3 7 722 484 109 36 0 chr17 17957436 17957546 -77315105 + (TCTA)n Simple_repeat Simple_repeat 1 114 0 7 722 1197 114 40 0 chr17 17957546 17957721 -77314930 - B2_Mm2 SINE B2 -11 184 3 7 722 432 0 0 0 chr17 17957788 17957836 -77314815 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 722 335 328 106 87 chr17 17957875 17958129 -77314522 + MER57D LTR ERV1 134 392 -19 7 722 436 265 93 87 chr17 17958131 17958292 -77314359 + RSINE1 SINE B4 4 165 0 7 722 588 297 0 25 chr17 17958372 17958534 -77314117 - RSINE1 SINE B4 -2 163 6 7 722 900 286 9 0 chr17 17959039 17959259 -77313392 + ID_B1 SINE B4 3 224 0 7 722 598 271 23 8 chr17 17959282 17959412 -77313239 + RSINE1 SINE B4 12 143 -22 7 722 626 245 102 38 chr17 17959420 17959577 -77313074 + B3 SINE B2 47 213 -3 7 722 343 380 31 12 chr17 17959636 17959796 -77312855 + B4A SINE B4 126 288 -4 7 722 232 305 55 37 chr17 17961032 17961141 -77311510 - L2b LINE L2 0 3375 3265 7 722 234 265 14 42 chr17 17961381 17961452 -77311199 + ID4 SINE ID 2 70 -13 7 722 949 207 22 36 chr17 17961543 17961768 -77310883 - URR1A DNA MER1_type 0 226 5 7 722 503 295 106 43 chr17 17961847 17962102 -77310549 - MER44B DNA MER2_type 0 550 280 7 722 492 351 13 26 chr17 17962100 17962252 -77310399 + B3A SINE B2 16 165 -33 7 722 183 42 0 0 chr17 17962307 17962331 -77310320 + (CCAA)n Simple_repeat Simple_repeat 1 24 0 7 722 180 358 51 31 chr17 17963067 17963165 -77309486 + L2b LINE L2 2975 3074 -301 7 722 271 240 51 51 chr17 17963379 17963458 -77309193 + L2b LINE L2 3239 3317 -58 7 722 203 242 61 0 chr17 17963981 17964047 -77308604 + (CGGGG)n Simple_repeat Simple_repeat 1 70 0 7 722 243 128 0 0 chr17 17964402 17964425 -77308226 + (TGG)n Simple_repeat Simple_repeat 3 25 0 7 722 441 0 0 0 chr17 17964425 17964474 -77308177 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 722 243 128 0 0 chr17 17964474 17964497 -77308154 + (TGG)n Simple_repeat Simple_repeat 2 24 0 7 722 210 304 0 0 chr17 17965785 17965841 -77306810 + CT-rich Low_complexity Low_complexity 2 57 0 7 722 263 194 67 10 chr17 17965934 17966038 -77306613 + GA-rich Low_complexity Low_complexity 6 115 0 7 722 304 324 72 92 chr17 17966121 17966427 -77306224 + L1MEg LINE L1 730 1029 -5055 7 722 351 0 0 0 chr17 17968813 17968852 -77303799 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 722 270 0 0 0 chr17 17968852 17968881 -77303770 + (GA)n Simple_repeat Simple_repeat 2 31 0 7 722 405 0 0 0 chr17 17969550 17969595 -77303056 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 722 189 0 0 0 chr17 17969914 17969935 -77302716 + (T)n Simple_repeat Simple_repeat 1 21 0 7 722 1265 209 166 0 chr17 17970626 17970933 -77301718 - MTEa LTR MaLR -21 358 1 7 722 403 219 58 116 chr17 17970933 17971083 -77301568 - MLT1B LTR MaLR -245 145 5 7 722 673 283 6 18 chr17 17971350 17971519 -77301132 - B3A SINE B2 -31 167 1 7 722 650 204 28 49 chr17 17971608 17971752 -77300899 + B1_Mm SINE Alu 1 141 -6 7 722 929 248 186 41 chr17 17971906 17972242 -77300409 + Lx8 LINE L1 6968 7336 -137 7 722 189 0 0 0 chr17 17972242 17972263 -77300388 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 7 722 929 248 186 41 chr17 17972263 17972368 -77300283 + Lx8 LINE L1 7337 7473 0 7 722 657 166 63 21 chr17 17972393 17972535 -77300116 + B1_Mur1 SINE Alu 2 149 0 7 722 428 224 88 15 chr17 17973862 17973998 -77298653 + B1F SINE Alu 4 149 0 7 722 714 261 16 27 chr17 17974022 17974207 -77298444 + ZP3AR Satellite Satellite 5 187 -25 7 722 240 341 0 12 chr17 17974168 17974254 -77298397 + BC1_Mm scRNA scRNA 1 85 -67 7 722 799 291 48 14 chr17 17976380 17976618 -77296033 - ZP3AR Satellite Satellite -92 246 1 7 722 225 0 0 0 chr17 17976618 17976643 -77296008 + (TG)n Simple_repeat Simple_repeat 1 25 0 7 722 518 274 187 24 chr17 17976657 17976866 -77295785 - B4 SINE B4 0 292 50 7 722 317 331 40 13 chr17 17976889 17977039 -77295612 + L2 LINE L2 2803 2956 -463 7 722 183 284 34 169 chr17 17976930 17977108 -77295543 - L3 LINE CR1 -3126 1363 1210 7 722 605 246 149 5 chr17 17977541 17977729 -77294922 - ID_B1 SINE B4 -7 217 3 7 722 187 286 30 45 chr17 17977824 17977890 -77294761 - L2 LINE L2 -1385 2034 1970 7 722 446 261 71 16 chr17 17977950 17978133 -77294518 + L1MB8 LINE L1 5399 5591 -583 7 722 233 333 13 0 chr17 17978137 17978212 -77294439 + B4A SINE B4 10 85 -207 7 722 238 194 78 31 chr17 17978583 17978647 -77294004 - RLTR22_Mur LTR ERVK -474 1374 1308 7 722 520 296 101 10 chr17 17978691 17978889 -77293762 + ID_B1 SINE B4 1 216 -8 7 722 768 305 105 23 chr17 17978893 17979379 -77293272 + L1MB8 LINE L1 5594 6119 -59 7 722 273 267 48 109 chr17 17979463 17979517 -77293134 + YREP_Mm Unknown Unknown 188 239 -1573 7 722 1010 234 121 59 chr17 17979517 17979872 -77292779 + MTE2a LTR MaLR 1 377 -2 7 722 578 225 8 16 chr17 17979872 17979939 -77292712 - ID_B1 SINE B4 -66 158 93 7 722 273 267 48 109 chr17 17979939 17979964 -77292687 + YREP_Mm Unknown Unknown 240 324 -1488 7 722 830 228 99 11 chr17 17979966 17980148 -77292503 - B3 SINE B2 0 216 19 7 722 28 0 0 0 chr17 17980296 17980324 -77292327 + AT_rich Low_complexity Low_complexity 1 28 0 7 722 192 167 0 45 chr17 17980472 17980516 -77292135 - MIR SINE MIR -57 151 110 7 722 635 281 24 24 chr17 17981339 17981507 -77291144 - B3 SINE B2 -9 207 40 7 722 693 0 0 0 chr17 17981573 17981650 -77291001 + (TTTCC)n Simple_repeat Simple_repeat 3 79 0 7 722 692 280 30 0 chr17 17981666 17981834 -77290817 - MTE2a LTR MaLR -12 367 195 7 722 558 29 0 0 chr17 17981834 17981902 -77290749 + (TG)n Simple_repeat Simple_repeat 2 69 0 7 722 734 273 22 33 chr17 17981997 17982179 -77290472 - MTE2a LTR MaLR -199 180 1 7 722 417 225 159 139 chr17 17982243 17982444 -77290207 - B3 SINE B2 -9 207 3 7 722 264 277 295 92 chr17 17983298 17983525 -77289126 + RMER15 LTR ERVL 275 547 -28 7 722 513 258 95 131 chr17 17983525 17983914 -77288737 + MTE2a LTR MaLR 1 375 -4 7 722 180 77 0 0 chr17 17984433 17984459 -77288192 + (TC)n Simple_repeat Simple_repeat 1 26 0 7 722 943 228 93 4 chr17 17985415 17985640 -77287011 + MTE2a LTR MaLR 135 379 0 7 722 203 310 0 14 chr17 17985920 17985992 -77286659 + (TGAA)n Simple_repeat Simple_repeat 1 71 0 7 722 397 105 0 0 chr17 17986075 17986132 -77286519 + MTEb LTR MaLR 1 57 -302 7 722 672 240 20 7 chr17 17986130 17986281 -77286370 + MTEb LTR MaLR 207 359 -20 7 722 222 37 0 0 chr17 17986423 17986450 -77286201 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 7 722 406 285 46 59 chr17 17986495 17986648 -77286003 + B4A SINE B4 8 158 -134 7 722 198 0 0 0 chr17 17986655 17986677 -77285974 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 722 261 57 0 0 chr17 17986825 17986860 -77285791 + (TGG)n Simple_repeat Simple_repeat 3 37 0 7 722 23 33 0 0 chr17 17987712 17987742 -77284909 + AT_rich Low_complexity Low_complexity 1 30 0 7 722 693 264 76 20 chr17 17987747 17987944 -77284707 - B3 SINE B2 -1 215 8 7 722 374 256 77 11 chr17 17988291 17988382 -77284269 + RSINE1 SINE B4 25 121 -44 7 722 227 250 78 67 chr17 17988557 17988570 -77284081 - MIRb SINE MIR -89 179 169 7 722 543 220 292 0 chr17 17988570 17988738 -77283913 - ID_B1 SINE B4 -7 217 1 7 722 291 237 92 0 chr17 17988738 17988814 -77283837 - MIR SINE MIR -98 164 82 7 722 311 214 0 0 chr17 17988981 17989037 -77283614 + RSINE1 SINE B4 75 130 -35 7 722 267 54 0 0 chr17 17989047 17989084 -77283567 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 722 377 203 13 26 chr17 17989111 17989187 -77283464 + ID SINE ID 6 80 -144 7 722 356 283 28 42 chr17 17989184 17989328 -77283323 + Charlie5 DNA MER1_type 2200 2341 -283 7 722 1097 103 7 0 chr17 17989434 17989579 -77283072 + B1_Mus2 SINE Alu 2 147 0 7 722 180 0 0 0 chr17 17989607 17989627 -77283024 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 7 722 246 95 0 0 chr17 17989643 17989685 -77282966 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 7 722 1162 117 10 31 chr17 17989696 17989728 -77282923 - B2_Mm1a SINE B2 -3 190 161 7 722 219 69 0 0 chr17 17989728 17989757 -77282894 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 7 722 1162 117 10 31 chr17 17989757 17989918 -77282733 - B2_Mm1a SINE B2 -33 160 1 7 722 530 311 77 0 chr17 17989919 17990115 -77282536 - ID_B1 SINE B4 -13 211 1 7 722 537 228 75 45 chr17 17990147 17990280 -77282371 - RSINE1 SINE B4 0 165 29 7 722 468 0 0 0 chr17 17990762 17990814 -77281837 + (TC)n Simple_repeat Simple_repeat 2 53 0 7 722 885 113 0 36 chr17 17990815 17990953 -77281698 - B1_Mus1 SINE Alu -14 134 2 7 722 410 284 10 10 chr17 17990955 17991051 -77281600 - RSINE1 SINE B4 -68 97 2 7 722 422 267 50 0 chr17 17991152 17991253 -77281398 - PB1 SINE Alu -11 116 11 7 722 236 296 14 0 chr17 17991650 17991721 -77280930 - MADE2 DNA Mariner -8 72 1 8 722 549 30 0 0 chr17 17992034 17992101 -77280550 + (CA)n Simple_repeat Simple_repeat 1 67 0 8 722 219 214 0 79 chr17 17992443 17992519 -77280132 + CT-rich Low_complexity Low_complexity 2 71 0 8 722 465 34 0 0 chr17 17992691 17992750 -77279901 + (TG)n Simple_repeat Simple_repeat 2 60 0 8 722 777 107 0 0 chr17 17993128 17993250 -77279401 + (TC)n Simple_repeat Simple_repeat 1 122 0 8 722 268 332 89 71 chr17 17994450 17994674 -77277977 - L2b LINE L2 0 3375 3148 8 722 1959 131 44 95 chr17 17994749 17995181 -77277470 + RMER17C LTR ERVK 1 410 0 8 722 497 298 77 60 chr17 17995267 17995435 -77277216 + B3A SINE B2 8 178 -17 8 722 382 304 0 0 chr17 17995433 17995512 -77277139 + B3 SINE B2 45 123 -93 8 722 786 204 32 42 chr17 17995499 17995688 -77276963 - RMER10B LTR ERVL -18 380 194 8 722 1368 171 31 0 chr17 17995683 17995940 -77276711 - RMER10B LTR ERVL -133 265 1 8 722 230 0 0 32 chr17 17996124 17996155 -77276496 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 8 722 928 101 14 21 chr17 17996157 17996299 -77276352 - B1_Mus1 SINE Alu 0 148 8 8 722 244 200 0 0 chr17 17996276 17996316 -77276335 - B2_Mm2 SINE B2 -154 41 2 8 722 29 28 0 0 chr17 17996324 17996360 -77276291 + AT_rich Low_complexity Low_complexity 1 36 0 8 722 441 0 0 0 chr17 17996437 17996486 -77276165 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 8 722 1224 212 114 29 chr17 17996503 17996853 -77275798 - RMER10A LTR ERVL -62 380 1 8 722 523 337 16 36 chr17 17996860 17997054 -77275597 - ID_B1 SINE B4 -30 194 5 8 722 350 247 26 0 chr17 17997233 17997310 -77275341 + MTEb LTR MaLR 18 96 -263 8 722 213 204 0 0 chr17 17997311 17997355 -77275296 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 722 252 350 43 7 chr17 17997429 17997567 -77275084 + RMER12 LTR ERVK 712 854 -468 8 722 420 156 18 44 chr17 17997628 17997742 -77274909 - Lx2A1 LINE L1 0 7008 6898 8 722 723 289 130 32 chr17 17997873 17998188 -77274463 + MTD LTR MaLR 1 346 -73 8 722 597 101 0 0 chr17 17998188 17998287 -77274364 + (TC)n Simple_repeat Simple_repeat 2 100 0 8 722 447 297 45 31 chr17 17998411 17998627 -77274024 + MTEb LTR MaLR 129 399 -20 8 722 331 306 58 29 chr17 17998871 17999009 -77273642 - L1MCa LINE L1 -5225 1283 1142 8 722 240 130 0 0 chr17 17999221 17999267 -77273384 + (TC)n Simple_repeat Simple_repeat 2 47 0 8 722 22 0 0 0 chr17 18000461 18000483 -77272168 + AT_rich Low_complexity Low_complexity 1 22 0 1 722 452 277 10 29 chr17 18000502 18000606 -77272045 - RSINE1 SINE B4 0 165 64 2 722 471 269 42 70 chr17 18000594 18000897 -77271754 + MTD LTR MaLR 134 405 -14 3 722 379 283 56 48 chr17 18001127 18001370 -77271281 - MTEa LTR MaLR -6 373 108 4 722 1251 268 68 63 chr17 18001390 18001741 -77270910 - MTE2b LTR MaLR -26 353 1 5 722 287 275 55 9 chr17 18002635 18002745 -77269906 + LTR48B LTR ERV1 359 473 -171 6 722 299 183 16 16 chr17 18002877 18002938 -77269713 + RLTR19-int LTR ERVK 4038 4098 -2039 7 722 256 280 13 26 chr17 18003328 18003405 -77269246 - MIRb SINE MIR -71 197 122 8 722 2277 93 85 28 chr17 18003588 18003942 -77268709 - L1_Mus4 LINE L1 -2 6634 6261 9 722 636 304 84 82 chr17 18004199 18004424 -77268227 - MLT1C LTR MaLR -2 465 239 1 722 1107 94 0 0 chr17 18004424 18004604 -77268047 + (TC)n Simple_repeat Simple_repeat 1 180 0 1 722 636 304 84 82 chr17 18004604 18004656 -77267995 - MLT1C LTR MaLR -229 238 188 1 722 198 91 0 0 chr17 18004656 18004689 -77267962 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 722 636 304 84 82 chr17 18004689 18004825 -77267826 - MLT1C LTR MaLR -280 187 50 1 722 241 236 55 0 chr17 18004937 18004992 -77267659 + polypyrimidine Low_complexity Low_complexity 2 59 0 1 722 897 263 35 8 chr17 18004999 18005218 -77267433 - ID_B1 SINE B4 -46 246 20 1 722 1125 224 24 0 chr17 18005307 18005512 -77267139 + B3 SINE B2 2 211 -5 1 722 1140 243 44 31 chr17 18005533 18005826 -77266825 - Lx8 LINE L1 -235 7238 6942 1 722 22 35 0 0 chr17 18006336 18006365 -77266286 + AT_rich Low_complexity Low_complexity 1 29 0 1 722 432 312 62 0 chr17 18006420 18006532 -77266119 - RSINE1 SINE B4 -45 120 2 1 722 212 299 35 0 chr17 18006624 18006711 -77265940 + CT-rich Low_complexity Low_complexity 2 91 0 1 722 322 226 11 56 chr17 18006938 18007027 -77265624 + B1F SINE Alu 62 146 -3 2 722 730 243 0 0 chr17 18007041 18007185 -77265466 + B1_Mus2 SINE Alu 1 144 -3 2 722 717 221 43 0 chr17 18007256 18007396 -77265255 + ZP3AR Satellite Satellite 23 168 -44 2 722 683 293 6 0 chr17 18007621 18007778 -77264873 - RSINE1 SINE B4 -6 159 2 2 722 974 213 125 138 chr17 18007992 18008196 -77264455 - MTD LTR MaLR -12 407 194 2 722 1059 248 0 14 chr17 18008196 18008409 -77264242 - B3 SINE B2 -5 211 2 2 722 974 213 125 138 chr17 18008409 18008531 -77264120 - MTD LTR MaLR -226 193 85 2 722 190 286 0 0 chr17 18008533 18008575 -77264076 - MIR SINE MIR -64 144 103 2 722 232 373 27 9 chr17 18009065 18009176 -77263475 - MER21B LTR ERV1 -72 791 679 2 722 368 275 0 12 chr17 18009224 18009305 -77263346 + ID4_ SINE ID 3 82 -1 2 722 771 345 43 14 chr17 18009342 18009624 -77263027 + B4A SINE B4 3 292 0 2 722 329 0 24 0 chr17 18009761 18009802 -77262849 + (CCAA)n Simple_repeat Simple_repeat 2 43 0 3 722 401 273 107 107 chr17 18009896 18010269 -77262382 - Lx8 LINE L1 0 7473 7101 3 722 1483 305 18 18 chr17 18010280 18010784 -77261867 - Lx8 LINE L1 -494 6979 6476 3 722 359 279 0 28 chr17 18010779 18010886 -77261765 + L1_Mur3 LINE L1 4702 4805 -1075 3 722 365 277 20 132 chr17 18011223 18011427 -77261224 + RLTR23 LTR ERV1 250 430 0 3 722 855 275 16 12 chr17 18011428 18011671 -77260980 + L1_Mur3 LINE L1 4819 5062 -818 3 722 4125 203 84 37 chr17 18011681 18012450 -77260201 + RLTR25B LTR ERVK 6 806 -222 3 722 513 84 0 0 chr17 18012450 18012521 -77260130 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 722 4125 203 84 37 chr17 18012521 18012728 -77259923 + RLTR25B LTR ERVK 807 1027 -1 3 722 691 234 82 49 chr17 18012728 18012990 -77259661 + L1_Mur3 LINE L1 5206 5480 -400 3 722 351 0 0 0 chr17 18012990 18013029 -77259622 + (TC)n Simple_repeat Simple_repeat 1 39 0 3 722 691 234 82 49 chr17 18013029 18013071 -77259580 + L1_Mur3 LINE L1 5481 5520 -360 3 722 474 291 6 98 chr17 18014748 18014912 -77257739 - B1_Mur1 SINE Alu 0 149 1 3 722 612 331 43 32 chr17 18014989 18015270 -77257381 - B4A SINE B4 -4 288 5 3 722 2466 101 11 51 chr17 18015330 18015705 -77256946 - L1_Mus4 LINE L1 0 6636 6277 3 722 265 241 72 0 chr17 18016137 18016220 -77256431 + L1MB5 LINE L1 5662 5750 -434 4 722 1399 257 58 0 chr17 18016232 18016574 -77256077 - MTD LTR MaLR -43 376 15 4 722 304 324 66 38 chr17 18016662 18016768 -77255883 + PB1D10 SINE Alu 9 117 0 4 722 642 254 65 38 chr17 18016814 18017076 -77255575 + L1MB5 LINE L1 5875 6143 -31 4 722 403 279 47 60 chr17 18017076 18017225 -77255426 + B1F SINE Alu 1 147 -2 4 722 651 307 78 58 chr17 18017229 18017471 -77255180 + B4A SINE B4 2 248 -44 4 722 578 154 222 111 chr17 18017744 18017892 -77254759 - Lx9 LINE L1 -3 7641 7476 4 722 510 17 0 0 chr17 18017892 18017951 -77254700 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 722 405 0 0 0 chr17 18017951 18017995 -77254656 + (GA)n Simple_repeat Simple_repeat 2 46 0 4 722 578 154 222 111 chr17 18017995 18018079 -77254572 - Lx9 LINE L1 -169 7475 7383 4 722 383 298 146 37 chr17 18018113 18018277 -77254374 - B3A SINE B2 -16 182 1 4 722 653 321 65 75 chr17 18018569 18018862 -77253789 - B4A SINE B4 0 292 3 4 722 23 33 0 0 chr17 18018936 18018966 -77253685 + AT_rich Low_complexity Low_complexity 1 30 0 5 722 317 341 0 0 chr17 18019262 18019347 -77253304 - PB1D10 SINE Alu -23 94 10 5 722 386 311 174 0 chr17 18019383 18019573 -77253078 - ID_B1 SINE B4 0 224 2 5 722 180 323 15 15 chr17 18020394 18020460 -77252191 + L2 LINE L2 1829 1894 -1525 5 722 882 255 32 23 chr17 18020535 18020756 -77251895 - ID_B1 SINE B4 0 224 2 5 722 264 320 88 24 chr17 18021461 18021586 -77251065 - RMER15 LTR ERVL 0 575 443 5 722 962 295 50 29 chr17 18022877 18023219 -77249432 + MLT1B LTR MaLR 38 386 -4 5 722 470 305 155 0 chr17 18023305 18023492 -77249159 + ID_B1 SINE B4 2 217 -7 5 722 207 0 0 0 chr17 18023528 18023551 -77249100 + (CAGAGA)n Simple_repeat Simple_repeat 2 24 0 5 722 229 299 21 84 chr17 18023554 18023649 -77249002 + MLT1H1 LTR MaLR 1 89 -466 5 722 625 303 0 6 chr17 18023796 18023952 -77248699 - B3A SINE B2 -33 165 11 6 722 1066 216 25 5 chr17 18023996 18024196 -77248455 - B3 SINE B2 -12 204 1 6 722 278 353 9 47 chr17 18024228 18024335 -77248316 + B3A SINE B2 2 104 -94 6 722 997 245 14 9 chr17 18024466 18024680 -77247971 + B3 SINE B2 2 216 0 6 722 305 167 138 25 chr17 18025029 18025109 -77247542 + B4 SINE B4 6 94 -198 6 722 380 336 64 28 chr17 18025541 18025682 -77246969 - ZP3AR Satellite Satellite -21 191 46 6 722 551 337 19 19 chr17 18025694 18025906 -77246745 - B3 SINE B2 -4 212 1 6 722 647 348 34 48 chr17 18026454 18026747 -77245904 - B4A SINE B4 0 292 4 6 722 376 214 140 37 chr17 18027557 18027664 -77244987 - RMER15 LTR ERVL 0 575 458 6 722 282 259 33 94 chr17 18027673 18027782 -77244869 + PB1D10 SINE Alu 18 117 0 6 722 351 0 0 0 chr17 18027969 18028008 -77244643 + (TTATA)n Simple_repeat Simple_repeat 4 42 0 7 722 905 153 127 18 chr17 18029124 18029290 -77243361 + B2_Mm2 SINE B2 3 186 -9 7 722 54 67 0 8 chr17 18031046 18031078 -77241573 + AT_rich Low_complexity Low_complexity 1 32 0 7 722 407 365 20 30 chr17 18031078 18031276 -77241375 + B3A SINE B2 3 198 0 7 722 54 67 0 8 chr17 18031276 18031364 -77241287 + AT_rich Low_complexity Low_complexity 1 88 0 7 722 237 283 79 0 chr17 18031381 18031448 -77241203 + B1F2 SINE Alu 10 82 -67 7 722 426 169 42 12 chr17 18031588 18031756 -77240895 + (TG)n Simple_repeat Simple_repeat 2 174 0 7 722 316 286 46 26 chr17 18032206 18032357 -77240294 + RMER15 LTR ERVL 321 474 -101 7 722 252 86 0 0 chr17 18032648 18032683 -77239968 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 722 448 229 34 8 chr17 18032729 18032848 -77239803 - Lx9 LINE L1 -5 7639 7518 7 722 1090 235 19 52 chr17 18033745 18034055 -77238596 + RLTR20A2 LTR ERVK 1 300 -278 8 722 2016 22 0 0 chr17 18034055 18034282 -77238369 + L1Md_T LINE L1 6090 6316 -266 8 722 602 260 148 30 chr17 18034299 18034440 -77238211 + RLTR20A2 LTR ERVK 276 433 -101 8 722 528 16 0 0 chr17 18034440 18034501 -77238150 + (TC)n Simple_repeat Simple_repeat 2 62 0 8 722 189 0 0 0 chr17 18034501 18034521 -77238130 + (TG)n Simple_repeat Simple_repeat 2 22 0 8 722 602 260 148 30 chr17 18034521 18034608 -77238043 + RLTR20A2 LTR ERVK 434 531 -3 8 722 561 294 48 38 chr17 18035394 18035603 -77237048 - B3 SINE B2 -5 211 1 8 722 277 271 14 0 chr17 18036133 18036203 -77236448 + ERVL-B4-int LTR ERVL 4812 4882 -832 8 722 643 220 20 88 chr17 18036482 18036686 -77235965 - RMER1A Other Other -4 1026 837 8 722 316 191 32 0 chr17 18036686 18036749 -77235902 - RMER12 LTR ERVK -1257 65 1 8 722 1083 192 5 5 chr17 18036751 18036955 -77235696 + RMER12 LTR ERVK 73 276 -1046 8 722 264 102 40 20 chr17 18036958 18037008 -77235643 - Lx2B LINE L1 -8 6992 6942 8 722 1264 41 14 0 chr17 18037256 18037401 -77235250 + B1_Mm SINE Alu 1 147 0 9 722 249 33 0 0 chr17 18037401 18037431 -77235220 + (A)n Simple_repeat Simple_repeat 1 30 0 9 722 195 323 31 41 chr17 18038764 18038861 -77233790 - MIRm SINE MIR -92 184 89 9 722 2095 188 20 30 chr17 18039035 18039243 -77233408 + RMER10B LTR ERVL 1 203 -195 9 722 207 100 0 0 chr17 18039243 18039273 -77233378 + (TG)n Simple_repeat Simple_repeat 1 30 0 9 722 2095 188 20 30 chr17 18039273 18039464 -77233187 + RMER10B LTR ERVL 204 395 -3 9 722 257 137 0 38 chr17 18040067 18040120 -77232531 + RLTR19-int LTR ERVK 2615 2665 -3472 9 722 668 165 72 150 chr17 18040122 18040138 -77232513 + RLTR20C LTR ERVK 1 12 -522 9 722 2511 74 48 0 chr17 18040138 18040450 -77232201 + ORR1A2 LTR MaLR 1 327 0 9 722 668 165 72 150 chr17 18040450 18040527 -77232124 + RLTR20C LTR ERVK 13 100 -434 9 722 1218 106 44 11 chr17 18040527 18040708 -77231943 - B2_Mm2 SINE B2 -8 187 1 9 722 668 165 72 150 chr17 18040708 18040820 -77231831 + RLTR20C LTR ERVK 101 191 -343 9 722 670 190 0 0 chr17 18040824 18040940 -77231711 + RMER10B LTR ERVL 283 398 0 9 722 403 301 31 54 chr17 18040940 18041068 -77231583 - RSINE1 SINE B4 -38 127 3 1 722 204 97 0 0 chr17 18041078 18041109 -77231542 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 722 674 196 7 15 chr17 18041184 18041319 -77231332 - B1_Mur2 SINE Alu -2 147 14 1 722 495 268 127 54 chr17 18041317 18041522 -77231129 - B4A SINE B4 -66 226 7 1 722 322 296 46 47 chr17 18041563 18041705 -77230946 - PB1D10 SINE Alu -13 136 1 1 722 561 76 0 0 chr17 18042142 18042221 -77230430 + (TTA)n Simple_repeat Simple_repeat 3 81 0 1 722 329 227 125 0 chr17 18042245 18042333 -77230318 - PB1D10 SINE Alu -18 99 1 1 722 238 327 0 71 chr17 18042917 18043029 -77229622 - MIRc SINE MIR -113 155 52 1 722 969 287 53 29 chr17 18044511 18044852 -77227799 + MLT1B LTR MaLR 38 386 -4 1 722 494 305 155 0 chr17 18044938 18045125 -77227526 + ID_B1 SINE B4 2 217 -7 1 722 200 34 0 33 chr17 18045161 18045191 -77227460 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 1 722 577 305 20 7 chr17 18045433 18045585 -77227066 - B3A SINE B2 -34 164 11 1 722 918 219 88 10 chr17 18045623 18045817 -77226834 - B3 SINE B2 -7 209 1 1 722 321 317 0 46 chr17 18045846 18045955 -77226696 + B3A SINE B2 1 104 -94 1 722 1020 227 35 0 chr17 18046080 18046283 -77226368 + B3 SINE B2 2 211 -5 1 722 252 0 0 0 chr17 18047838 18047866 -77224785 + (T)n Simple_repeat Simple_repeat 1 28 0 1 722 271 148 36 18 chr17 18050219 18050274 -77222377 + B4 SINE B4 6 61 -231 1 722 476 307 64 21 chr17 18050739 18050879 -77221772 - ZP3AR Satellite Satellite -21 191 46 1 722 559 337 23 0 chr17 18050921 18051096 -77221555 - B3 SINE B2 -37 179 1 1 722 556 374 31 34 chr17 18051649 18051940 -77220711 - B4A SINE B4 0 292 3 1 722 185 213 85 0 chr17 18052019 18052066 -77220585 + MIRc SINE MIR 101 151 -117 1 722 2068 175 51 11 chr17 18052230 18052605 -77220046 - ORR1B1 LTR MaLR 0 394 5 1 722 676 288 68 32 chr17 18053014 18053204 -77219447 - ID_B1 SINE B4 -25 199 3 1 722 210 150 0 0 chr17 18053528 18053568 -77219083 + (CAAAA)n Simple_repeat Simple_repeat 5 44 0 1 722 466 278 104 153 chr17 18053657 18054123 -77218528 - RMER4B LTR ERVK -11 891 64 1 722 274 378 47 8 chr17 18054141 18054269 -77218382 + B4A SINE B4 148 280 -12 1 722 526 341 47 14 chr17 18054432 18054643 -77218008 + MER20 DNA MER1_type 2 219 0 1 722 466 172 0 0 chr17 18054868 18054967 -77217684 + A-rich Low_complexity Low_complexity 3 101 0 1 722 353 252 111 9 chr17 18055059 18055167 -77217484 - RMER15 LTR ERVL 0 575 457 1 722 315 224 56 45 chr17 18055175 18055264 -77217387 + PB1D10 SINE Alu 18 107 -10 1 722 303 304 34 51 chr17 18055495 18055613 -77217038 - ZP3AR Satellite Satellite -90 122 7 1 722 321 26 0 0 chr17 18056713 18056751 -77215900 + (TCTG)n Simple_repeat Simple_repeat 2 39 0 1 722 22 0 0 0 chr17 18058569 18058591 -77214060 + AT_rich Low_complexity Low_complexity 1 22 0 1 722 37 0 0 0 chr17 18058774 18058811 -77213840 + AT_rich Low_complexity Low_complexity 1 37 0 1 722 346 189 46 19 chr17 18059034 18059142 -77213509 + (TG)n Simple_repeat Simple_repeat 2 112 0 1 722 336 26 0 0 chr17 18059144 18059183 -77213468 - HAL1-3A_ME LINE L1 -846 2012 1974 1 722 296 299 46 33 chr17 18059640 18059792 -77212859 + RMER15 LTR ERVL 321 474 -101 1 722 307 253 53 0 chr17 18060052 18060127 -77212524 - HAL1-3A_ME LINE L1 -814 2044 1966 1 722 448 208 30 8 chr17 18060177 18060308 -77212343 - Lx9 LINE L1 -5 7639 7506 1 722 334 293 22 0 chr17 18060315 18060417 -77212234 - Lx7 LINE L1 -1773 5700 5597 1 722 1772 215 54 64 chr17 18061190 18061716 -77210935 + RLTR20C LTR ERVK 1 562 -6 1 722 511 271 77 44 chr17 18062442 18062640 -77210011 - B3A SINE B2 0 216 2 1 722 1592 229 33 44 chr17 18063483 18063913 -77208738 - RMER1A Other Other -10 1020 596 1 722 3773 185 22 14 chr17 18063914 18064675 -77207976 + RMER12 LTR ERVK 1 767 -555 1 722 327 145 0 0 chr17 18064676 18064745 -77207906 + (TCCA)n Simple_repeat Simple_repeat 1 69 0 1 722 422 250 30 73 chr17 18064754 18064817 -77207834 + RMER12 LTR ERVK 736 792 -530 1 722 555 78 0 0 chr17 18064817 18064894 -77207757 + (TA)n Simple_repeat Simple_repeat 2 78 0 1 722 422 250 30 73 chr17 18064894 18064994 -77207657 + RMER12 LTR ERVK 793 892 -430 1 722 378 42 0 0 chr17 18064995 18065043 -77207608 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 722 386 297 57 73 chr17 18065043 18065340 -77207311 + RMER12 LTR ERVK 1116 1523 -285 1 722 903 299 144 0 chr17 18065341 18065360 -77207291 - RMER1A Other Other -431 599 581 1 722 352 51 17 17 chr17 18065360 18065420 -77207231 + (CAAA)n Simple_repeat Simple_repeat 2 61 0 1 722 1257 309 100 11 chr17 18065420 18066052 -77206599 - RMER1A Other Other -450 580 18 1 722 4153 158 26 5 chr17 18066105 18066482 -77206169 - L1_Mur2 LINE L1 -509 5368 4990 1 722 183 100 0 0 chr17 18066482 18066512 -77206139 + (TCTTG)n Simple_repeat Simple_repeat 1 30 0 1 722 4153 158 26 5 chr17 18066512 18066877 -77205774 - L1_Mur2 LINE L1 -888 4989 4613 1 722 2588 226 32 16 chr17 18066880 18067434 -77205217 + RLTR20B1 LTR ERVK 1 563 0 1 722 2237 161 0 35 chr17 18067478 18067883 -77204768 - Lx2 LINE L1 -770 6227 5837 1 722 4010 154 60 8 chr17 18067883 18068615 -77204036 + Lx2B LINE L1 6227 6996 -4 1 722 636 26 0 0 chr17 18068846 18068924 -77203727 + (TG)n Simple_repeat Simple_repeat 2 79 0 1 722 9058 181 68 43 chr17 18069579 18070302 -77202349 + MYSERV16_I-int LTR ERVK 1 1349 -1493 1 722 1622 157 78 0 chr17 18070302 18070583 -77202068 - Lx2 LINE L1 -1 6996 6694 1 722 9058 179 69 44 chr17 18070583 18072137 -77200514 + MYSERV16_I-int LTR ERVK 742 2324 -2 1 722 2482 240 25 13 chr17 18072139 18072692 -77199959 + RLTR20B1 LTR ERVK 1 560 -3 1 722 1747 29 0 0 chr17 18072693 18072899 -77199752 + L1Md_F2 LINE L1 5814 6019 -563 1 722 4925 19 3 0 chr17 18072890 18073463 -77199188 + L1Md_F2 LINE L1 5012 5586 -297 1 722 7913 45 6 4 chr17 18073463 18074457 -77198194 + L1Md_F2 LINE L1 5587 6582 0 1 722 11303 183 21 98 chr17 18074476 18076021 -77196630 - L1_Mur2 LINE L1 -1265 4612 3066 1 722 489 34 0 0 chr17 18076021 18076080 -77196571 + (TTTTA)n Simple_repeat Simple_repeat 2 60 0 1 722 11303 183 21 98 chr17 18076080 18076151 -77196500 - L1_Mur2 LINE L1 -2812 3065 2984 1 722 3215 73 0 2 chr17 18076151 18076574 -77196077 - L1_Mus1 LINE L1 0 6567 6146 1 722 11303 183 21 98 chr17 18076574 18077753 -77194898 - L1_Mur2 LINE L1 -2894 2983 2056 1 722 393 22 0 0 chr17 18077753 18077799 -77194852 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 722 11303 183 21 98 chr17 18077799 18078051 -77194600 - L1_Mur2 LINE L1 -3822 2055 1798 1 722 812 145 0 0 chr17 18081035 18081159 -77191492 - Lx3B LINE L1 -460 6513 6390 1 722 5405 156 23 37 chr17 18081154 18082793 -77189858 - Lx3B LINE L1 -3 6997 5359 1 722 4307 140 23 130 chr17 18082803 18083755 -77188896 - L1_Mus4 LINE L1 -4 6632 5783 1 722 13200 176 132 14 chr17 18083750 18085687 -77186964 - L1_Mus4 LINE L1 -590 5293 2997 1 722 834 11 0 0 chr17 18085687 18085782 -77186869 + (TTC)n Simple_repeat Simple_repeat 2 96 0 1 722 13200 176 132 14 chr17 18085782 18086889 -77185762 - L1_Mus4 LINE L1 -2887 2996 1890 1 722 2058 74 7 6 chr17 18086883 18086986 -77185665 - L1VL2 LINE L1 -5325 1097 894 1 722 5952 84 2 1 chr17 18086986 18087786 -77184865 - L1_Mus3 LINE L1 -1 6637 5837 1 90 3379 176 132 4 chr17 18087786 18088508 -77184143 - L1VL2 LINE L1 -5400 1022 203 1 723 7571 166 76 16 chr17 18088509 18088536 -77184115 - Lx3B LINE L1 -560 5326 5307 1 723 351 0 0 0 chr17 18088536 18088575 -77184076 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1 723 2590 156 0 2 chr17 18088575 18089005 -77183646 - Lx3A LINE L1 -13 6968 6540 1 723 7571 166 76 16 chr17 18089005 18090612 -77182039 - Lx3B LINE L1 -580 5306 3594 1 723 1858 110 9 62 chr17 18090614 18090954 -77181697 - RLTRETN_Mm LTR ERVK 0 322 1 1 723 10048 124 11 40 chr17 18090954 18092687 -77179964 - MMETn-int LTR ERVK -2503 5714 3219 1 723 23808 58 1 25 chr17 18092742 18095954 -77176697 - MMETn-int LTR ERVK -1708 3136 2 1 723 1696 141 9 62 chr17 18095955 18096295 -77176356 - RLTRETN_Mm LTR ERVK 0 322 1 1 723 9670 149 34 13 chr17 18096295 18096882 -77175769 - MusHAL1 LINE L1 -316 2396 1808 1 723 1334 94 16 5 chr17 18096882 18097074 -77175577 - B2_Mm2 SINE B2 -1 194 1 1 723 9670 149 34 13 chr17 18097074 18098296 -77174355 - MusHAL1 LINE L1 -905 1807 548 1 723 30295 103 11 3 chr17 18098320 18104529 -77168122 - L1_Mus1 LINE L1 -1 6566 306 1 723 1968 168 47 7 chr17 18104536 18104963 -77167688 - MusHAL1 LINE L1 -2203 509 66 1 723 2273 158 39 30 chr17 18104960 18105365 -77167286 - L1_Mur2 LINE L1 -3410 2467 2049 1 723 507 112 0 0 chr17 18105365 18105454 -77167197 + (TG)n Simple_repeat Simple_repeat 2 90 0 1 723 2273 158 39 30 chr17 18105454 18105556 -77167095 - L1_Mur2 LINE L1 -3829 2048 1955 1 723 276 314 44 44 chr17 18105576 18105666 -77166985 - ZP3AR Satellite Satellite -116 96 7 1 723 486 137 0 0 chr17 18106890 18106985 -77165666 + (TTTC)n Simple_repeat Simple_repeat 4 98 0 1 723 2275 136 11 0 chr17 18108975 18109327 -77163324 - L1_Mm LINE L1 -60 5823 5468 1 723 2714 116 56 5 chr17 18109327 18109753 -77162898 + L1_Mus4 LINE L1 6189 6636 0 1 723 296 229 43 71 chr17 18110001 18110142 -77162509 - Lx9 LINE L1 -2 7642 7506 1 723 409 269 45 3 chr17 18110116 18110278 -77162373 - Lx7 LINE L1 -1731 5742 5532 1 723 192 97 0 0 chr17 18110295 18110326 -77162325 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 723 326 311 168 0 chr17 18111015 18111134 -77161517 + ID_B1 SINE B4 5 143 -81 1 723 2878 89 10 12 chr17 18111721 18112131 -77160520 - RLTR9E LTR ERVK 0 409 1 1 723 490 96 12 23 chr17 18112132 18112218 -77160433 - ETnERV2-int LTR ERVK -2 7404 7331 1 723 1913 195 31 53 chr17 18112417 18113403 -77159248 - RMER16-int LTR ERVK -1230 4176 2696 1 723 3419 90 14 32 chr17 18113403 18113907 -77158744 - L1Md_F2 LINE L1 -4 6578 6084 1 723 1913 209 119 72 chr17 18113907 18113995 -77158656 - RMER16-int LTR ERVK -1817 3589 3463 1 723 9714 116 38 2 chr17 18113986 18115008 -77157643 - ETnERV2-int LTR ERVK -2421 4985 3932 1 723 339 25 0 0 chr17 18115008 18115048 -77157603 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 723 9714 116 38 2 chr17 18115048 18115517 -77157134 - ETnERV2-int LTR ERVK -3475 3931 3443 1 723 4827 130 61 18 chr17 18115748 18116703 -77155948 - ETnERV2-int LTR ERVK -3958 3448 1995 1 723 234 0 0 0 chr17 18116703 18116729 -77155922 + (C)n Simple_repeat Simple_repeat 1 26 0 1 723 4827 126 64 11 chr17 18116729 18116752 -77155899 - ETnERV2-int LTR ERVK -4877 2529 2496 1 723 4693 135 64 37 chr17 18116776 18117766 -77154885 - ETnERV2-int LTR ERVK -5320 2086 1071 1 723 862 243 113 20 chr17 18117776 18118129 -77154522 - ETnERV2-int LTR ERVK -2927 387 2 1 723 2803 88 7 12 chr17 18118130 18118535 -77154116 - RLTR9E LTR ERVK 0 409 7 1 723 62 14 0 0 chr17 18119082 18119151 -77153500 + AT_rich Low_complexity Low_complexity 1 69 0 1 723 1237 242 109 35 chr17 18119423 18119791 -77152860 - MTD LTR MaLR 0 419 25 1 723 331 203 0 0 chr17 18119813 18119872 -77152779 + B3A SINE B2 2 60 -138 1 723 1325 289 33 127 chr17 18120030 18121036 -77151615 - RMER1A Other Other -431 599 7 1 723 7993 145 128 6 chr17 18121197 18123478 -77149173 + L1VL4 LINE L1 613 3161 -2722 1 723 301 280 22 88 chr17 18124606 18124743 -77147908 - B3 SINE B2 -3 213 86 1 723 319 397 38 12 chr17 18124977 18125217 -77147434 + MLT1B LTR MaLR 1 246 -144 1 723 869 239 9 32 chr17 18125224 18125444 -77147207 - Lx5 LINE L1 -165 6885 6671 1 723 226 130 0 42 chr17 18125427 18125475 -77147176 - Lx5 LINE L1 -888 6162 6117 1 723 370 407 6 6 chr17 18126499 18126667 -77145984 + B4 SINE B4 123 290 -2 1 723 2383 204 49 20 chr17 18128463 18128974 -77143677 + RLTR11A LTR ERVK 1 526 -2 1 723 25 51 0 0 chr17 18129259 18129298 -77143353 + AT_rich Low_complexity Low_complexity 1 39 0 2 723 378 0 0 0 chr17 18129624 18129666 -77142985 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 723 291 277 0 0 chr17 18129754 18129819 -77142832 + MTE2a LTR MaLR 1 65 -314 2 723 283 250 43 54 chr17 18129932 18130025 -77142626 + MTE2a LTR MaLR 278 369 -10 2 723 6733 77 17 9 chr17 18130094 18131059 -77141592 - L1_Mus3 LINE L1 -1 6637 5666 2 723 17377 141 22 55 chr17 18131146 18132807 -77139844 - Lx3C LINE L1 0 6976 5294 2 723 264 77 0 0 chr17 18132807 18132846 -77139805 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 723 17377 132 14 142 chr17 18132846 18133101 -77139550 - Lx3C LINE L1 -590 5293 4992 2 723 4817 187 38 11 chr17 18133101 18134034 -77138617 + RMER17B LTR ERVK 1 958 0 2 723 17377 132 14 142 chr17 18134034 18134386 -77138265 - Lx3C LINE L1 -892 4991 4717 2 723 1868 126 97 73 chr17 18134386 18134850 -77137801 + IAPLTR2_Mm LTR ERVK 1 475 0 2 723 17377 132 14 142 chr17 18134850 18135614 -77137037 - Lx3C LINE L1 -1167 4716 4491 2 723 1194 126 70 5 chr17 18135614 18135814 -77136837 - L1Md_F2 LINE L1 -10 6572 6360 2 723 17377 132 14 142 chr17 18135814 18138262 -77134389 - Lx3C LINE L1 -1393 4490 2039 2 723 231 294 0 0 chr17 18138948 18139016 -77133635 + (CA)n Simple_repeat Simple_repeat 2 69 0 2 723 599 71 0 12 chr17 18139890 18139976 -77132675 + (TA)n Simple_repeat Simple_repeat 1 85 0 2 723 646 302 28 34 chr17 18140000 18140178 -77132473 - B3A SINE B2 -16 182 6 2 723 384 353 15 0 chr17 18140225 18140358 -77132293 + B3A SINE B2 6 140 -58 2 723 396 0 0 0 chr17 18140363 18140407 -77132244 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 723 330 324 45 0 chr17 18140879 18140990 -77131661 + MIR SINE MIR 74 189 -73 2 723 528 344 15 45 chr17 18141726 18141927 -77130724 - ID_B1 SINE B4 -25 199 5 2 723 357 82 0 0 chr17 18142876 18142925 -77129726 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 2 723 194 0 39 0 chr17 18142968 18142994 -77129657 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 723 522 0 0 0 chr17 18142994 18143052 -77129599 + (GA)n Simple_repeat Simple_repeat 2 59 0 2 723 207 0 0 0 chr17 18143381 18143404 -77129247 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 2 723 597 14 0 0 chr17 18143894 18143964 -77128687 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 2 723 600 320 128 9 chr17 18143986 18144213 -77128438 - MTD LTR MaLR -161 258 5 2 723 13500 160 20 14 chr17 18144792 18147957 -77124694 - Lx LINE L1 -7 6647 3471 2 723 1976 141 62 40 chr17 18147957 18148357 -77124294 - RLTR9E LTR ERVK 0 409 1 2 723 13500 182 17 16 chr17 18148357 18148879 -77123772 - Lx LINE L1 -2413 3470 2940 2 723 1062 166 13 5 chr17 18148879 18149103 -77123548 + L1_Mur2 LINE L1 5159 5384 -493 2 723 4923 136 4 3 chr17 18149103 18149880 -77122771 + L1_Mus4 LINE L1 5859 6636 0 2 723 27 0 0 0 chr17 18149943 18149970 -77122681 + AT_rich Low_complexity Low_complexity 1 27 0 2 723 545 289 39 30 chr17 18150201 18150404 -77122247 - B3 SINE B2 -9 207 3 2 723 7980 141 34 13 chr17 18150572 18152131 -77120520 - Lx2 LINE L1 0 6997 5423 2 723 2337 93 0 3 chr17 18152131 18152456 -77120195 - L1_Mus1 LINE L1 0 6567 6244 2 723 3049 164 18 35 chr17 18152456 18152600 -77120051 - Lx2 LINE L1 -461 5422 5271 2 723 435 373 80 26 chr17 18152656 18152967 -77119684 + MLT1B LTR MaLR 6 333 -57 2 723 441 337 53 5 chr17 18154217 18154405 -77118246 - B3 SINE B2 -9 207 11 2 723 481 325 102 42 chr17 18154645 18154752 -77117899 + MLT1B LTR MaLR 29 143 -247 2 723 1676 43 0 0 chr17 18154752 18154959 -77117692 - L1Md_F2 LINE L1 -12 6570 6364 2 723 481 325 102 42 chr17 18154959 18155134 -77117517 + MLT1B LTR MaLR 144 328 -62 2 723 326 231 45 55 chr17 18155598 18155708 -77116943 - Lx4A LINE L1 -68 6990 6882 2 723 732 123 0 0 chr17 18156520 18156634 -77116017 + (TTCC)n Simple_repeat Simple_repeat 4 117 0 2 723 328 26 0 0 chr17 18156634 18156672 -77115979 + (TC)n Simple_repeat Simple_repeat 2 39 0 2 723 968 128 0 0 chr17 18156676 18156817 -77115834 - B1_Mus1 SINE Alu -7 141 1 2 723 456 123 0 0 chr17 18156861 18156934 -77115717 + (CA)n Simple_repeat Simple_repeat 1 73 0 2 723 269 216 0 0 chr17 18157014 18157065 -77115586 + B4 SINE B4 9 59 -233 2 723 340 398 24 18 chr17 18157092 18157256 -77115395 + B4 SINE B4 122 286 -6 2 723 1082 250 161 15 chr17 18157361 18157880 -77114771 + RMER20B LTR ERVK 3 597 -30 2 723 233 297 25 63 chr17 18157883 18157947 -77114704 + RMER20B LTR ERVK 525 588 -39 2 723 261 57 0 0 chr17 18157947 18157982 -77114669 + (CAA)n Simple_repeat Simple_repeat 2 36 0 2 723 233 297 25 63 chr17 18157982 18157996 -77114655 + RMER20B LTR ERVK 589 600 -27 2 723 252 310 58 58 chr17 18160053 18160190 -77112461 + ID_B1 SINE B4 87 223 -1 2 723 3529 85 2 12 chr17 18160974 18161462 -77111189 - L1_Mus1 LINE L1 -3 6564 6082 2 723 322 310 92 60 chr17 18161651 18161836 -77110815 + MTD LTR MaLR 9 199 -220 2 723 518 361 75 33 chr17 18162107 18162829 -77109822 + Lx8 LINE L1 6295 7046 -427 2 723 474 306 85 22 chr17 18163052 18163326 -77109325 + MTD LTR MaLR 10 286 -93 2 723 1212 245 85 41 chr17 18163326 18163609 -77109042 + ORR1C2 LTR MaLR 1 301 -83 2 723 3200 58 2 0 chr17 18163609 18164004 -77108647 + MTA_Mm LTR MaLR 1 396 0 2 723 1212 245 85 41 chr17 18164004 18164086 -77108565 + ORR1C2 LTR MaLR 302 382 -2 2 723 845 280 16 20 chr17 18164087 18164331 -77108320 + ORR1C2-int LTR MaLR 1 243 -1266 2 723 4150 149 8 0 chr17 18164337 18164989 -77107662 - Lx2 LINE L1 -1 6996 6340 2 723 6904 33 1 0 chr17 18164997 18165810 -77106841 - L1Md_F2 LINE L1 -13 6569 5756 2 723 6332 55 17 0 chr17 18165810 18166649 -77106002 + L1Md_F2 LINE L1 4796 5648 -235 2 723 16964 168 40 48 chr17 18166647 18169818 -77102833 - Lx2 LINE L1 -645 6352 3320 2 723 315 0 0 0 chr17 18169818 18169853 -77102798 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 723 16964 179 33 60 chr17 18169853 18170015 -77102636 - Lx2 LINE L1 -2567 3319 3136 2 723 312 27 0 0 chr17 18170015 18170052 -77102599 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 2 723 16964 179 33 60 chr17 18170052 18170989 -77101662 - Lx2 LINE L1 -2751 3135 2150 2 723 4394 157 19 18 chr17 18171003 18171788 -77100863 - Lx LINE L1 -7 6647 5862 2 723 6538 132 67 8 chr17 18171813 18173651 -77099000 - L1_Mus3 LINE L1 -5 6633 4708 2 723 19077 111 3 2 chr17 18173649 18176513 -77096138 + L1Md_F2 LINE L1 2718 5586 -297 2 723 7178 83 5 7 chr17 18176514 18177511 -77095140 + L1Md_F2 LINE L1 5588 6582 0 2 723 230 182 0 0 chr17 18177511 18177555 -77095096 - L1_Mur2 LINE L1 -566 5311 5268 2 723 372 22 0 0 chr17 18177752 18177797 -77094854 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 723 406 314 101 25 chr17 18178344 18178543 -77094108 - MTE2a LTR MaLR -5 374 161 2 723 499 298 32 21 chr17 18178916 18179149 -77093502 + MYSERV6-int LTR ERVK 1597 1791 -7168 2 723 1783 195 15 3 chr17 18179315 18179644 -77093007 + ORR1A1 LTR MaLR 6 338 -8 2 723 1956 296 92 91 chr17 18179769 18180403 -77092248 + MYSERV6-int LTR ERVK 1332 1977 -6982 2 723 181 250 0 43 chr17 18180403 18180449 -77092202 - L2a LINE L2 -68 3358 3315 2 723 1956 296 92 91 chr17 18180449 18180764 -77091887 + MYSERV6-int LTR ERVK 1978 2300 -6659 2 723 5924 86 9 1 chr17 18180764 18181564 -77091087 + RLTR13D1 LTR ERVK 1 806 0 2 723 1956 296 92 91 chr17 18181564 18182135 -77090516 + MYSERV6-int LTR ERVK 2301 2900 -6059 2 723 645 286 26 4 chr17 18182135 18182367 -77090284 + MYSERV6-int LTR ERVK 4120 4356 -4603 2 723 8328 38 1 1 chr17 18182368 18183365 -77089286 - L1Md_F3 LINE L1 0 6584 5588 2 723 255 175 0 0 chr17 18183602 18183659 -77088992 + (TTTA)n Simple_repeat Simple_repeat 4 60 0 2 723 605 325 58 97 chr17 18183915 18184502 -77088149 + MYSERV6-int LTR ERVK 4527 5090 -1460 2 723 373 272 93 67 chr17 18184505 18184698 -77087953 + RMER4A LTR ERVK 242 439 -27 2 723 252 0 0 0 chr17 18185175 18185203 -77087448 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 723 440 257 75 44 chr17 18185320 18185548 -77087103 + RLTR19-int LTR ERVK 2278 2512 -3625 2 723 22 0 0 0 chr17 18187650 18187672 -77084979 + AT_rich Low_complexity Low_complexity 1 22 0 2 723 21 57 0 0 chr17 18188223 18188258 -77084393 + AT_rich Low_complexity Low_complexity 1 35 0 2 723 234 377 47 0 chr17 18188381 18188487 -77084164 - RSINE1 SINE B4 -2 163 53 2 723 272 48 24 0 chr17 18189162 18189204 -77083447 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 723 183 232 0 0 chr17 18189577 18189633 -77083018 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 723 8239 86 11 10 chr17 18189907 18191246 -77081405 - L1Md_F2 LINE L1 -1 6581 5244 2 723 384 88 0 0 chr17 18191246 18191303 -77081348 + (TA)n Simple_repeat Simple_repeat 2 58 0 2 723 8239 101 9 3 chr17 18191303 18191839 -77080812 - L1Md_F2 LINE L1 -640 5243 4698 2 723 24 77 0 0 chr17 18191913 18191965 -77080686 + AT_rich Low_complexity Low_complexity 1 52 0 2 723 33 56 0 0 chr17 18192033 18192087 -77080564 + AT_rich Low_complexity Low_complexity 1 54 0 2 723 24 0 0 0 chr17 18192125 18192149 -77080502 + AT_rich Low_complexity Low_complexity 1 24 0 2 723 332 320 122 53 chr17 18192331 18192519 -77080132 - B3A SINE B2 0 216 16 2 723 4414 95 3 8 chr17 18193503 18194129 -77078522 + Lx3_Mus LINE L1 6387 7009 0 2 723 21 0 0 0 chr17 18194138 18194159 -77078492 + AT_rich Low_complexity Low_complexity 1 21 0 2 723 248 377 41 0 chr17 18195163 18195285 -77077366 - Lx8 LINE L1 -153 7320 7194 2 723 192 97 0 0 chr17 18195286 18195317 -77077334 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2 723 1204 201 155 12 chr17 18195319 18195641 -77077010 + ORR1B1 LTR MaLR 5 372 -22 2 723 3252 299 39 56 chr17 18195644 18197038 -77075613 + ORR1B1-int LTR MaLR 1 1370 0 2 723 1038 259 118 12 chr17 18197043 18197383 -77075268 + ORR1B1 LTR MaLR 11 386 -8 2 723 279 295 29 130 chr17 18197837 18197976 -77074675 + MT2B2 LTR ERVL 56 266 -315 2 723 310 333 21 0 chr17 18197976 18198072 -77074579 + B1_Mur1 SINE Alu 15 112 -37 2 723 238 234 0 15 chr17 18198115 18198180 -77074471 + (TAAA)n Simple_repeat Simple_repeat 1 64 0 2 723 654 375 16 49 chr17 18201523 18201893 -77070758 - ORR1D2 LTR MaLR -12 358 1 2 723 314 408 87 18 chr17 18201986 18202263 -77070388 - MTEb LTR MaLR -79 300 5 2 723 27 29 0 0 chr17 18202471 18202505 -77070146 + AT_rich Low_complexity Low_complexity 1 34 0 2 723 4632 157 26 6 chr17 18202505 18203338 -77069313 - Lx2 LINE L1 -1 6996 6147 2 723 327 364 47 30 chr17 18204159 18204394 -77068257 - Lx8 LINE L1 -212 7261 7023 2 723 269 234 13 13 chr17 18204498 18204576 -77068075 - Lx3B LINE L1 -3 6973 6896 2 723 5558 219 97 23 chr17 18204569 18206606 -77066045 - Lx3B LINE L1 -989 5984 3788 2 723 1750 207 19 17 chr17 18206601 18207018 -77065633 + L1_Mur2 LINE L1 4203 4620 -1257 2 723 219 146 0 0 chr17 18207120 18207161 -77065490 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 723 1652 176 49 0 chr17 18207451 18207757 -77064894 - ORR1A3 LTR MaLR 0 326 6 2 723 5891 178 48 10 chr17 18207764 18208962 -77063689 - ORR1A3-int LTR MaLR -2 1961 718 2 723 689 188 15 0 chr17 18208968 18209101 -77063550 - MT2B LTR ERVL -345 256 122 2 723 751 206 8 0 chr17 18209114 18209245 -77063406 - ORR1A3 LTR MaLR -194 132 1 2 723 27 29 0 0 chr17 18211613 18211647 -77061004 + AT_rich Low_complexity Low_complexity 1 34 0 3 723 23 0 0 0 chr17 18211696 18211719 -77060932 + AT_rich Low_complexity Low_complexity 1 23 0 3 723 232 319 17 42 chr17 18212401 18212519 -77060132 + Lx9 LINE L1 6779 6893 -751 3 723 4720 38 2 5 chr17 18212597 18213174 -77059477 + L1Md_F2 LINE L1 6004 6578 -4 3 723 349 103 0 0 chr17 18213183 18213248 -77059403 + L1VL1 LINE L1 973 1037 -2662 3 723 786 211 27 145 chr17 18213248 18213613 -77059038 + RLTRETN_Mm LTR ERVK 1 322 0 3 723 5762 193 68 69 chr17 18213616 18217527 -77055124 + MMETn-int LTR ERVK 2 6185 -1221 3 723 5036 126 15 0 chr17 18217527 18217791 -77054860 + L1_Mus1 LINE L1 3933 4196 -1687 3 723 441 0 0 0 chr17 18217791 18217840 -77054811 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 723 5036 126 15 0 chr17 18217840 18218374 -77054277 + L1_Mus1 LINE L1 4197 4742 -1141 3 90 7127 86 25 13 chr17 18218375 18219114 -77053537 + L1_Mus1 LINE L1 5244 5997 -570 3 724 2869 59 0 0 chr17 18219114 18219468 -77053183 - IAPEY2_LTR LTR ERVK 0 357 4 3 724 7127 66 25 24 chr17 18219468 18220035 -77052616 + L1_Mus1 LINE L1 5998 6566 -1 3 724 1057 296 56 82 chr17 18220426 18221461 -77051190 + MYSERV6-int LTR ERVK 8125 8898 -61 3 724 682 106 10 0 chr17 18222802 18222906 -77049745 - B1_Mus2 SINE Alu -1 146 42 3 724 266 159 41 55 chr17 18222849 18222922 -77049729 - RLTR25B LTR ERVK -530 498 427 3 724 223 353 0 0 chr17 18222923 18223008 -77049643 + C-rich Low_complexity Low_complexity 6 90 0 3 724 210 169 25 38 chr17 18223011 18223091 -77049560 + CT-rich Low_complexity Low_complexity 3 81 0 3 724 323 117 0 62 chr17 18223143 18223207 -77049444 - B1_Mur4 SINE Alu -90 60 1 3 724 257 236 13 40 chr17 18223147 18223222 -77049429 - B4A SINE B4 -150 142 70 3 724 24 32 0 0 chr17 18223878 18223909 -77048742 + AT_rich Low_complexity Low_complexity 1 31 0 3 724 482 57 14 0 chr17 18225559 18225629 -77047022 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 724 2295 62 3 31 chr17 18225847 18226166 -77046485 - L1_Mus2 LINE L1 0 6566 6257 3 724 21 57 0 0 chr17 18226282 18226317 -77046334 + AT_rich Low_complexity Low_complexity 1 35 0 3 724 297 292 75 53 chr17 18226771 18226865 -77045786 - B3 SINE B2 -119 97 2 3 724 4679 158 13 23 chr17 18227016 18227730 -77044921 + RLTR22_Mur LTR ERVK 2 719 -1129 3 724 3197 19 0 0 chr17 18227730 18228101 -77044550 - L1Md_A LINE L1 0 6582 6212 3 724 4679 158 13 23 chr17 18228101 18228249 -77044402 + RLTR22_Mur LTR ERVK 720 855 -993 3 724 2350 8 0 0 chr17 18229132 18229396 -77043255 - L1Md_A LINE L1 0 6582 6319 3 724 213 73 35 52 chr17 18229654 18229712 -77042939 + (CAAA)n Simple_repeat Simple_repeat 2 58 0 3 724 4701 114 63 1 chr17 18229867 18230596 -77042055 + Lx3_Mus LINE L1 6220 6993 -16 3 724 756 108 0 0 chr17 18231469 18231599 -77041052 + (GA)n Simple_repeat Simple_repeat 2 131 0 3 724 6041 107 36 1 chr17 18231990 18233285 -77039366 - Lx3_Mus LINE L1 -683 6326 4970 3 724 26 0 0 0 chr17 18233602 18233628 -77039023 + AT_rich Low_complexity Low_complexity 1 26 0 3 724 1014 239 148 14 chr17 18233639 18233983 -77038668 + ORR1B1 LTR MaLR 5 394 0 3 724 562 288 26 35 chr17 18234014 18234244 -77038407 + ORR1B1-int LTR MaLR 47 274 -1235 3 724 32695 89 9 5 chr17 18234244 18240271 -77032380 - L1Md_F2 LINE L1 -15 6567 514 3 724 2100 280 48 17 chr17 18240272 18241157 -77031494 + ORR1B1-int LTR MaLR 268 1315 -194 3 724 3877 124 31 39 chr17 18241157 18241801 -77030850 - L1_Mus4 LINE L1 -45 6591 5953 3 724 192 227 28 70 chr17 18244253 18244324 -77028327 - L4 LINE RTE -1539 490 423 3 724 407 390 37 73 chr17 18245013 18245367 -77027284 - ORR1D2 LTR MaLR -29 341 1 3 724 298 409 83 32 chr17 18245460 18245738 -77026913 - MTEa LTR MaLR -80 299 8 3 724 4625 174 20 7 chr17 18245972 18246810 -77025841 - Lx2 LINE L1 -3 6994 6146 3 724 25606 120 12 77 chr17 18247380 18251773 -77020878 - L1_Mus2 LINE L1 0 6566 2157 3 724 207 0 0 0 chr17 18251773 18251796 -77020855 + (TA)n Simple_repeat Simple_repeat 2 24 0 3 724 25606 127 12 96 chr17 18251796 18252458 -77020193 - L1_Mus2 LINE L1 -3727 2156 1935 3 724 3611 67 0 8 chr17 18252458 18252928 -77019723 + L1Md_F2 LINE L1 6117 6582 0 3 724 25606 122 10 68 chr17 18252928 18253761 -77018890 - L1_Mus2 LINE L1 -3949 1934 1104 3 724 9329 57 0 1 chr17 18253751 18255604 -77017047 - L1Md_F2 LINE L1 0 6582 4732 3 724 1790 195 92 5 chr17 18255595 18256007 -77016644 - L1_Mus2 LINE L1 -5486 1130 683 3 724 326 279 38 9 chr17 18256008 18256113 -77016538 - L1_Mus2 LINE L1 -5838 778 671 3 724 3346 38 55 88 chr17 18256773 18257264 -77015387 + IAPLTR2_Mm LTR ERVK 1 475 0 3 724 284 137 77 64 chr17 18257266 18257344 -77015307 + IAPEz-int LTR ERVK 3 81 -1906 3 724 491 186 19 10 chr17 18257311 18257414 -77015237 + IAPEz-int LTR ERVK 20 123 -6358 3 724 227 267 0 0 chr17 18257414 18257459 -77015192 + RLTR27 LTR ERVK 231 275 -34 3 724 226 345 0 0 chr17 18257485 18257540 -77015111 + RLTR27 LTR ERVK 221 275 -34 3 724 3601 64 1 14 chr17 18257540 18258193 -77014458 + IAPEz-int LTR ERVK 168 662 -5819 3 724 2502 94 3 3 chr17 18258193 18258535 -77014116 + IAPEz-int LTR ERVK 1359 1700 -4781 3 724 5515 44 3 15 chr17 18258528 18259214 -77013437 + IAPEz-int LTR ERVK 5651 6328 -153 3 724 351 365 43 89 chr17 18259315 18259595 -77013056 + ORR1C2 LTR MaLR 87 353 -31 3 724 2047 209 54 60 chr17 18259657 18260340 -77012311 - Lx3C LINE L1 -1004 5972 5324 3 724 4261 203 8 7 chr17 18260340 18261296 -77011355 - Lx3C LINE L1 -987 4899 3943 3 724 35161 70 6 3 chr17 18261499 18267844 -77004807 - L1Md_F2 LINE L1 -2 6583 124 3 724 747 204 18 12 chr17 18267843 18268012 -77004639 - Lx3C LINE L1 -1929 3957 3788 3 724 1717 208 42 5 chr17 18268007 18268412 -77004239 + L1_Mur2 LINE L1 4203 4622 -1255 3 724 345 75 0 0 chr17 18268512 18268565 -77004086 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 724 28 48 0 0 chr17 18268753 18268795 -77003856 + AT_rich Low_complexity Low_complexity 1 42 0 3 724 21 36 0 0 chr17 18268806 18268834 -77003817 + AT_rich Low_complexity Low_complexity 1 28 0 3 724 1300 229 68 0 chr17 18268850 18269143 -77003508 - ORR1A3 LTR MaLR -8 318 6 3 724 5308 213 21 8 chr17 18269154 18270309 -77002342 - ORR1A3-int LTR MaLR -6 1957 788 3 724 308 331 89 15 chr17 18270231 18270366 -77002285 - B1_Mus2 SINE Alu 0 147 3 3 724 289 297 28 65 chr17 18270271 18270379 -77002272 - MT2B2 LTR ERVL -327 257 154 3 724 719 224 90 0 chr17 18270385 18270541 -77002110 - MT2B LTR ERVL -345 256 87 3 724 1785 164 9 0 chr17 18270541 18270871 -77001780 + L1_Mur2 LINE L1 3367 3699 -2178 3 724 436 231 34 14 chr17 18270873 18270994 -77001657 - ORR1A3-int LTR MaLR -1134 124 2 3 724 1448 180 28 102 chr17 18270995 18271064 -77001587 - ORR1A3 LTR MaLR 0 326 286 3 724 1083 83 7 7 chr17 18271064 18271210 -77001441 - B1_Mus2 SINE Alu 0 147 2 3 724 1448 180 28 102 chr17 18271210 18271492 -77001159 - ORR1A3 LTR MaLR -41 285 1 3 724 1121 138 44 2 chr17 18271700 18271940 -77000711 + L1_Mm LINE L1 3431 3676 -2207 3 724 21 0 0 0 chr17 18274117 18274138 -76998513 + AT_rich Low_complexity Low_complexity 1 21 0 3 724 320 306 8 40 chr17 18274827 18274953 -76997698 + Lx9 LINE L1 6779 6900 -744 3 724 4580 52 2 5 chr17 18275024 18275603 -76997048 + L1Md_F2 LINE L1 6004 6580 -2 3 724 360 22 0 0 chr17 18275626 18275672 -76996979 + L1VL1 LINE L1 991 1036 -5386 3 724 756 208 172 36 chr17 18275672 18276032 -76996619 + RLTR9E LTR ERVK 1 409 0 3 724 5674 189 72 68 chr17 18276035 18279092 -76993559 + MMETn-int LTR ERVK 2 4085 -3321 3 724 288 0 0 0 chr17 18279092 18279124 -76993527 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 3 724 4582 139 3 33 chr17 18279124 18279983 -76992668 + ETnERV2-int LTR ERVK 2378 3141 -1703 3 724 6830 134 7 3 chr17 18280037 18281012 -76991639 + ETnERV2-int LTR ERVK 6228 7206 -200 3 724 716 195 294 52 chr17 18281012 18281321 -76991330 + RLTR13D6 LTR ERVK 154 537 -365 3 724 425 88 0 42 chr17 18281321 18281392 -76991259 + ETnERV2-int LTR ERVK 7329 7396 -10 3 724 868 190 170 49 chr17 18281401 18281766 -76990885 + RLTR9E LTR ERVK 1 409 0 3 724 22924 123 138 6 chr17 18281766 18284701 -76987950 + L1_Mus1 LINE L1 1247 4210 -1673 3 724 216 0 0 0 chr17 18284701 18284725 -76987926 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 724 22924 104 102 9 chr17 18284725 18286000 -76986651 + L1_Mus1 LINE L1 4211 5997 -570 3 724 2947 54 0 0 chr17 18286000 18286354 -76986297 - IAPEY2_LTR LTR ERVK -3 354 1 3 724 7215 64 25 13 chr17 18286354 18286909 -76985742 + L1_Mus1 LINE L1 5998 6566 -1 3 724 1038 302 50 77 chr17 18287299 18288334 -76984317 + MYSERV6-int LTR ERVK 8126 8898 -61 3 724 192 40 0 0 chr17 18289663 18289688 -76982963 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3 724 779 129 0 163 chr17 18289688 18289854 -76982797 - B1_Mus1 SINE Alu -9 139 1 3 724 24 32 0 0 chr17 18290528 18290559 -76982092 + AT_rich Low_complexity Low_complexity 1 31 0 3 724 482 79 13 0 chr17 18292200 18292276 -76980375 + (TG)n Simple_repeat Simple_repeat 2 78 0 3 724 2250 65 3 34 chr17 18292493 18292813 -76979838 - L1_Mus2 LINE L1 0 6566 6257 3 724 287 303 75 53 chr17 18293418 18293512 -76979139 - B3 SINE B2 -119 97 2 3 724 4745 154 14 13 chr17 18293663 18294516 -76978135 + RLTR22_Mur LTR ERVK 2 855 -993 3 724 198 0 0 0 chr17 18295633 18295655 -76976996 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3 724 4750 110 63 1 chr17 18295846 18296575 -76976076 + Lx3_Mus LINE L1 6220 6993 -16 3 724 6035 108 35 1 chr17 18297545 18298844 -76973807 - Lx3_Mus LINE L1 -683 6326 4970 3 724 26 0 0 0 chr17 18299161 18299187 -76973464 + AT_rich Low_complexity Low_complexity 1 26 0 3 724 1024 237 152 15 chr17 18299198 18299541 -76973110 + ORR1B1 LTR MaLR 5 394 0 3 724 548 312 67 45 chr17 18299541 18299809 -76972842 + ORR1B1-int LTR MaLR 1 274 -1235 3 724 13392 77 9 5 chr17 18299809 18302316 -76970335 - L1Md_F2 LINE L1 -17 6565 4045 3 724 467 235 0 25 chr17 18302316 18302438 -76970213 + ORR1B1-int LTR MaLR 1197 1315 -194 3 724 3831 128 20 38 chr17 18302438 18303089 -76969562 - L1_Mus4 LINE L1 -45 6591 5953 3 724 192 227 28 70 chr17 18305533 18305604 -76967047 - L4 LINE RTE -1539 490 423 3 724 404 381 45 82 chr17 18306293 18306647 -76966004 - ORR1D2 LTR MaLR -29 341 1 3 724 299 399 88 37 chr17 18306745 18307018 -76965633 - MTEa LTR MaLR -85 294 8 3 724 4617 173 20 7 chr17 18307251 18308089 -76964562 - Lx2 LINE L1 -3 6994 6146 3 724 7518 113 10 8 chr17 18308662 18310513 -76962138 - L1_Mus2 LINE L1 -1 6565 4705 3 724 5741 135 28 3 chr17 18310516 18311946 -76960705 - L1_Mus2 LINE L1 -3733 2150 683 3 724 336 284 19 19 chr17 18311947 18312051 -76960600 - L1_Mus2 LINE L1 -5838 778 675 3 724 300 232 45 34 chr17 18312127 18312216 -76960435 - L1VL1 LINE L1 -6060 362 273 3 724 244 94 38 0 chr17 18312811 18312864 -76959787 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 3 724 321 356 50 96 chr17 18312883 18313163 -76959488 + ORR1C2 LTR MaLR 87 353 -31 3 724 8474 26 1 0 chr17 18313229 18314821 -76957830 - L1Md_A LINE L1 0 6582 4990 3 724 2286 212 19 23 chr17 18314821 18315529 -76957122 - Lx3C LINE L1 -1004 5972 5305 3 724 5290 207 11 7 chr17 18315523 18316732 -76955919 - Lx3C LINE L1 -886 5000 3788 3 724 1755 204 42 5 chr17 18316727 18317132 -76955519 + L1_Mur2 LINE L1 4203 4622 -1255 3 724 360 59 0 0 chr17 18317232 18317283 -76955368 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 724 5447 207 33 11 chr17 18317554 18319019 -76953632 - ORR1A3-int LTR MaLR -6 1957 20 3 724 318 331 89 15 chr17 18318941 18319076 -76953575 - B1_Mus2 SINE Alu 0 147 3 3 724 627 267 139 0 chr17 18319076 18319251 -76953400 - MT2B LTR ERVL -315 286 87 3 724 1698 176 9 0 chr17 18319252 18319582 -76953069 + L1_Mm LINE L1 3374 3706 -2177 3 724 458 222 34 14 chr17 18319583 18319704 -76952947 - ORR1A3-int LTR MaLR -1134 124 2 3 724 1423 177 28 125 chr17 18319705 18319783 -76952868 - ORR1A3 LTR MaLR 0 326 286 3 724 1125 75 0 7 chr17 18319783 18319930 -76952721 - B1_Mus2 SINE Alu 0 147 2 3 724 1423 177 28 125 chr17 18319930 18320212 -76952439 - ORR1A3 LTR MaLR -41 285 1 3 724 3193 46 15 0 chr17 18324036 18324426 -76948225 + MTA_Mm LTR MaLR 1 396 0 3 724 8203 72 6 3 chr17 18324426 18325520 -76947131 + MTA_Mm-int LTR MaLR 1 1098 0 3 724 3402 33 5 0 chr17 18325520 18325914 -76946737 + MTA_Mm LTR MaLR 1 396 0 3 724 454 322 77 10 chr17 18326434 18326641 -76946010 - Lx3C LINE L1 -27 6949 6729 4 724 747 307 59 35 chr17 18326808 18327233 -76945418 + Lx9 LINE L1 6912 7346 -298 4 724 28357 23 1 1 chr17 18327471 18330822 -76941829 + L1Md_T LINE L1 2236 5586 -297 4 724 8268 38 0 4 chr17 18330822 18331822 -76940829 + L1Md_T LINE L1 5587 6582 0 4 724 3307 195 17 11 chr17 18331920 18332672 -76939979 - L1_Mur2 LINE L1 -499 5378 4622 4 724 3668 239 44 14 chr17 18332694 18333592 -76939059 + Lx4A LINE L1 6129 7038 -20 4 724 24 53 0 0 chr17 18333607 18333645 -76939006 + AT_rich Low_complexity Low_complexity 1 38 0 4 724 1608 329 79 15 chr17 18333832 18334695 -76937956 - RMER1B Other Other -5 1061 76 4 724 3283 33 10 0 chr17 18334695 18335084 -76937567 - MTA_Mm LTR MaLR 0 396 4 4 724 1459 348 81 34 chr17 18335084 18335152 -76937499 - RMER1A Other Other -955 75 16 4 724 358 346 14 23 chr17 18335323 18335539 -76937112 - Lx6 LINE L1 -35 7425 7212 4 724 192 239 0 69 chr17 18335790 18335862 -76936789 - L2 LINE L2 -1989 1430 1364 4 724 6528 71 3 1 chr17 18335945 18336803 -76935848 + L1Md_F2 LINE L1 4727 5586 -297 4 724 7552 70 1 7 chr17 18336803 18337805 -76934846 + L1Md_F2 LINE L1 5587 6582 0 4 724 323 228 92 23 chr17 18338891 18339021 -76933630 + L1M2 LINE L1 5132 5270 -873 4 724 263 335 50 50 chr17 18339360 18339561 -76933090 + Lx8 LINE L1 5599 5799 -1674 4 724 341 171 146 0 chr17 18339970 18340052 -76932599 + L1_Mur2 LINE L1 5688 5781 -96 4 724 8205 142 6 13 chr17 18340057 18341743 -76930908 + Lx3A LINE L1 5296 6966 -15 4 724 288 0 0 0 chr17 18341743 18341775 -76930876 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 4 724 447 324 12 106 chr17 18341815 18342060 -76930591 - RMER12 LTR ERVK 0 1322 1101 4 724 3219 144 44 16 chr17 18342252 18342861 -76929790 - RLTR22_Mur LTR ERVK -977 871 246 4 724 28 0 0 0 chr17 18342861 18342889 -76929762 + AT_rich Low_complexity Low_complexity 1 28 0 4 724 10406 134 45 3 chr17 18342896 18345221 -76927430 - L1_Mus3 LINE L1 -3 6635 4214 4 724 366 145 0 16 chr17 18345225 18345288 -76927363 - L1_Mus4 LINE L1 -329 6307 6246 4 724 1229 221 0 0 chr17 18345277 18345531 -76927120 + L1_Mm LINE L1 4674 4927 -956 4 724 901 200 39 0 chr17 18345528 18345708 -76926943 - L1_Mur2 LINE L1 -406 5471 5285 4 724 899 162 0 0 chr17 18345716 18345858 -76926793 - B1_Mus1 SINE Alu -6 142 1 4 724 1293 232 0 13 chr17 18345861 18346171 -76926480 - L1_Mm LINE L1 -585 5298 4993 4 724 5168 158 20 16 chr17 18346167 18347708 -76924943 - L1VL4 LINE L1 -1864 1953 474 4 724 316 294 19 19 chr17 18348648 18348752 -76923899 - L1MCa LINE L1 -4504 2004 1901 4 90 19226 38 19 4 chr17 18348794 18351112 -76921539 - RLTR45-int LTR ERVK 0 7244 4891 4 725 32488 69 41 29 chr17 18351094 18351856 -76920795 - RLTR45-int LTR ERVK -2470 4774 3994 4 725 195 270 127 0 chr17 18351856 18351919 -76920732 + MER5A DNA MER1_type 10 80 -109 4 725 32488 69 41 29 chr17 18351919 18355810 -76916841 - RLTR45-int LTR ERVK -2470 3993 1 4 725 3834 38 12 8 chr17 18355810 18356290 -76916361 - RLTR45 LTR ERVK 0 482 1 4 725 5143 156 16 103 chr17 18356970 18357118 -76915533 - RLTR13D5 LTR ERVK 0 1023 899 4 725 1051 98 0 20 chr17 18357118 18357264 -76915387 - B1_Mm SINE Alu 0 147 5 4 725 5143 156 16 103 chr17 18357264 18358235 -76914416 - RLTR13D5 LTR ERVK -125 898 1 4 725 3229 149 8 75 chr17 18359027 18359401 -76913250 - RLTR22_Mur LTR ERVK -993 855 511 4 725 1123 50 7 0 chr17 18359401 18359542 -76913109 - B1_Mm SINE Alu -1 146 5 4 725 3229 149 8 75 chr17 18359542 18359836 -76912815 - RLTR22_Mur LTR ERVK -1338 510 232 4 725 212 149 21 0 chr17 18359836 18359883 -76912768 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 725 18257 197 71 24 chr17 18360064 18362744 -76909907 + L1_Mus4 LINE L1 546 3219 -2664 4 725 2769 19 3 0 chr17 18362744 18363065 -76909586 - RLTRETN_Mm LTR ERVK 0 322 1 4 725 18257 180 74 12 chr17 18363065 18365679 -76906972 + L1_Mus4 LINE L1 3220 6146 -490 4 725 267 155 48 76 chr17 18365892 18365997 -76906654 + RMER17C LTR ERVK 175 276 -134 4 725 21 0 0 0 chr17 18367266 18367287 -76905364 + AT_rich Low_complexity Low_complexity 1 21 0 4 725 21 57 0 0 chr17 18368159 18368194 -76904457 + AT_rich Low_complexity Low_complexity 1 35 0 4 725 21 0 0 0 chr17 18368222 18368243 -76904408 + AT_rich Low_complexity Low_complexity 1 21 0 4 725 2419 127 39 8 chr17 18368983 18369371 -76903280 + RLTR9D LTR ERVK 1 400 -3 4 725 385 202 25 34 chr17 18369497 18369615 -76903036 - MYSERV-int LTR ERVK -59 6491 6375 4 725 360 257 35 35 chr17 18369764 18369877 -76902774 - MYSERV6-int LTR ERVK -266 8693 8581 4 725 2783 153 62 39 chr17 18369887 18370467 -76902184 - RLTR1D LTR ERV1 0 605 5 4 725 7929 92 42 13 chr17 18370470 18372611 -76900040 - MMVL30-int LTR ERV1 0 3698 1495 4 725 181 181 137 14 chr17 18372676 18372749 -76899902 + MIR SINE MIR 66 147 -115 4 725 378 118 29 0 chr17 18372882 18372950 -76899701 - MMVL30-int LTR ERV1 -2187 1511 1442 4 725 448 202 57 174 chr17 18372925 18373189 -76899462 - MMVL30-int LTR ERV1 -2107 1192 960 4 725 957 99 27 40 chr17 18373254 18373402 -76899249 - MMVL30-int LTR ERV1 -2245 1453 1308 4 725 254 61 0 0 chr17 18373398 18373431 -76899220 - MMVL30-int LTR ERV1 -2508 1190 1158 4 725 2546 76 79 28 chr17 18373600 18373991 -76898660 - IAPLTR2a LTR ERVK 0 411 1 4 725 346 253 0 0 chr17 18374273 18374360 -76898291 - RLTR19-int LTR ERVK -3716 2421 2335 4 725 4296 118 25 13 chr17 18374907 18375622 -76897029 - L1_Mur1 LINE L1 -1369 4517 3794 4 725 1620 316 88 13 chr17 18375626 18376428 -76896223 + RMER1B Other Other 150 1063 -3 4 725 1734 49 4 4 chr17 18376610 18376836 -76895815 - L1Md_F2 LINE L1 0 6582 6357 4 725 3229 58 2 0 chr17 18377158 18377553 -76895098 - MTA_Mm LTR MaLR 0 396 1 4 725 365 256 92 17 chr17 18377650 18377769 -76894882 + RMER15 LTR ERVL 337 464 -111 4 725 907 118 6 12 chr17 18377773 18377945 -76894706 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 4 725 244 61 39 39 chr17 18377958 18378009 -76894642 + (GAAAA)n Simple_repeat Simple_repeat 1 51 0 4 725 235 384 96 40 chr17 18378093 18378394 -76894257 + MTE-int LTR MaLR 674 991 -589 4 725 328 282 17 17 chr17 18379179 18379298 -76893353 - Lx9 LINE L1 -737 6907 6789 4 725 27 49 0 0 chr17 18379586 18379627 -76893024 + AT_rich Low_complexity Low_complexity 1 41 0 4 725 4271 127 49 7 chr17 18382365 18383077 -76889574 + Lx3_Mus LINE L1 6268 7009 0 4 725 25 31 0 0 chr17 18383123 18383155 -76889496 + AT_rich Low_complexity Low_complexity 1 32 0 4 725 1565 232 13 0 chr17 18383198 18383512 -76889139 + ORR1A3 LTR MaLR 1 318 -8 4 725 7306 221 43 68 chr17 18383517 18385529 -76887122 + ORR1A3-int LTR MaLR 2 1963 0 4 725 1416 211 81 0 chr17 18385534 18385832 -76886819 + ORR1A3 LTR MaLR 6 327 0 4 725 210 37 0 0 chr17 18386122 18386149 -76886502 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 725 1227 208 15 0 chr17 18386257 18386517 -76886134 - L1_Mur2 LINE L1 -1272 4605 4342 4 725 3770 157 46 23 chr17 18386519 18387218 -76885433 + Lx LINE L1 5935 6649 -5 4 725 4774 196 21 20 chr17 18387220 18388334 -76884317 + Lx3B LINE L1 3884 4998 -888 4 725 3063 196 11 3 chr17 18388325 18388985 -76883666 + Lx3B LINE L1 5310 5972 -1001 4 725 267 224 0 38 chr17 18388986 18389065 -76883586 + Lx3B LINE L1 6890 6965 -11 4 725 577 370 4 24 chr17 18389068 18389320 -76883331 - ORR1C2 LTR MaLR -55 329 83 4 725 4242 161 18 63 chr17 18390462 18391022 -76881629 + Lx2 LINE L1 6150 6664 -333 4 725 233 29 0 29 chr17 18391022 18391057 -76881594 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 725 4242 161 18 63 chr17 18391057 18391384 -76881267 + Lx2 LINE L1 6665 6996 -1 4 725 22 0 0 0 chr17 18391717 18391739 -76880912 + AT_rich Low_complexity Low_complexity 1 22 0 4 725 399 123 0 0 chr17 18391784 18391865 -76880786 + (T)n Simple_repeat Simple_repeat 1 81 0 4 725 1057 57 43 0 chr17 18391865 18392005 -76880646 - B1_Mm SINE Alu 0 147 2 4 725 491 379 37 74 chr17 18392260 18392585 -76880066 + ORR1D2 LTR MaLR 1 313 -57 4 725 21 36 0 0 chr17 18396053 18396081 -76876570 + AT_rich Low_complexity Low_complexity 1 28 0 4 725 342 310 56 25 chr17 18396121 18396259 -76876392 - B1_Mus2 SINE Alu -1 146 1 4 725 259 298 38 128 chr17 18396259 18396380 -76876271 - MT2B2 LTR ERVL -429 155 56 4 725 1303 294 21 5 chr17 18396827 18397207 -76875444 - ORR1B1 LTR MaLR -8 386 1 4 725 2987 327 39 42 chr17 18397207 18398580 -76874071 - ORR1B1-int LTR MaLR 0 1370 1 4 725 623 244 269 7 chr17 18398580 18398889 -76873762 - ORR1B1 LTR MaLR 0 394 5 4 725 234 0 0 0 chr17 18400258 18400284 -76872367 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 725 240 167 0 0 chr17 18400606 18400654 -76871997 + T-rich Low_complexity Low_complexity 1 48 0 4 725 353 311 79 74 chr17 18401353 18401582 -76871069 - RMER12 LTR ERVK 0 1322 1093 4 725 189 0 0 0 chr17 18401809 18401830 -76870821 + (A)n Simple_repeat Simple_repeat 1 21 0 4 725 3450 124 3 33 chr17 18401830 18402412 -76870239 - RLTR22_Mur LTR ERVK -1016 832 268 4 725 3477 181 116 61 chr17 18402414 18402615 -76870036 + L1_Mus3 LINE L1 407 581 -6057 4 725 4382 10 0 12 chr17 18402615 18403114 -76869537 - MT2_Mm LTR ERVL 0 493 1 4 725 3477 181 116 61 chr17 18403114 18403464 -76869187 + L1_Mus3 LINE L1 582 975 -5663 4 725 1088 83 0 0 chr17 18403464 18403609 -76869042 + B1_Mus2 SINE Alu 1 145 -2 4 725 227 29 0 54 chr17 18403609 18403646 -76869005 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 4 725 25528 171 61 36 chr17 18403646 18404082 -76868569 + L1_Mus3 LINE L1 976 1445 -4438 4 725 3416 75 30 2 chr17 18404082 18404552 -76868099 + L1_Mus1 LINE L1 6085 6567 0 4 725 25528 152 13 11 chr17 18404552 18409737 -76862914 + L1_Mus3 LINE L1 1446 6634 -4 4 725 1180 209 98 4 chr17 18409737 18409843 -76862808 - RLTR22_Mur LTR ERVK -1567 281 176 4 725 594 41 0 0 chr17 18409843 18409916 -76862735 + (TA)n Simple_repeat Simple_repeat 2 74 0 4 725 1180 209 98 4 chr17 18409916 18410064 -76862587 - RLTR22_Mur LTR ERVK -1673 175 4 4 725 275 330 114 19 chr17 18410218 18410323 -76862328 + B3 SINE B2 7 121 -95 4 725 24 53 0 0 chr17 18410967 18411005 -76861646 + AT_rich Low_complexity Low_complexity 1 38 0 4 725 251 278 83 0 chr17 18411032 18411140 -76861511 - Lx9 LINE L1 -6 7638 7522 4 725 405 0 0 0 chr17 18411164 18411209 -76861442 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 725 2765 104 26 0 chr17 18411678 18412100 -76860551 + L1_Mus3 LINE L1 6205 6637 -1 4 725 370 259 73 18 chr17 18415169 18415334 -76857317 - MYSERV6-int LTR ERVK -8 6542 6369 4 725 939 298 51 98 chr17 18415504 18416215 -76856436 - MYSERV6-int LTR ERVK -288 8671 8177 4 725 1895 264 100 18 chr17 18416218 18416770 -76855881 + MTE-int LTR MaLR 666 1262 -318 4 725 228 35 0 0 chr17 18416770 18416799 -76855852 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4 725 278 226 57 114 chr17 18418164 18418269 -76854382 - RMER4B LTR ERVK -39 546 448 4 725 341 316 85 22 chr17 18418341 18418528 -76854123 - MYSERV-int LTR ERVK -1440 5110 4981 4 725 2932 137 87 2 chr17 18418619 18419139 -76853512 + RMER17B LTR ERVK 1 564 -394 4 725 4522 128 16 29 chr17 18419140 18419903 -76852748 - L1_Mm LINE L1 -314 5569 4817 4 725 1317 179 0 8 chr17 18419895 18420148 -76852503 + L1_Mm LINE L1 4539 4789 -1094 4 725 29 70 0 0 chr17 18420240 18420297 -76852354 + AT_rich Low_complexity Low_complexity 1 57 0 5 725 2696 188 131 67 chr17 18421839 18423039 -76849612 + L1_Mur2 LINE L1 2496 3926 -1954 5 725 240 189 15 15 chr17 18423347 18423481 -76849170 + (TCTA)n Simple_repeat Simple_repeat 3 136 0 5 725 4024 164 23 17 chr17 18424943 18425638 -76847013 - RLTR22_Mur LTR ERVK -992 856 152 5 725 375 23 0 0 chr17 18425638 18425682 -76846969 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 725 4024 164 23 17 chr17 18425682 18425756 -76846895 - RLTR22_Mur LTR ERVK -1697 151 83 5 725 21 0 0 0 chr17 18425865 18425886 -76846765 + AT_rich Low_complexity Low_complexity 1 21 0 5 725 6460 158 9 59 chr17 18425888 18427779 -76844872 + L1VL4 LINE L1 191 1975 -1584 5 725 561 134 0 0 chr17 18428110 18428192 -76844459 - L1_Mus3 LINE L1 -379 6259 6178 5 725 5504 127 20 19 chr17 18428198 18429104 -76843547 + L1_Mus3 LINE L1 5732 6638 0 5 725 607 307 4 4 chr17 18429117 18429343 -76843308 - RLTR6-int LTR ERV1 -147 7631 7406 5 725 597 275 48 31 chr17 18429366 18429761 -76842890 + MurERV4-int LTR ERVK 2512 2829 -2431 5 725 18186 48 3 0 chr17 18430199 18432511 -76840140 + L1_Mm LINE L1 2734 5051 -832 5 725 1634 38 48 0 chr17 18432511 18432721 -76839930 + L1Md_F3 LINE L1 6351 6570 -14 5 725 418 283 102 70 chr17 18432806 18432992 -76839659 + RMER4A LTR ERVK 238 429 -37 5 725 27 0 0 0 chr17 18433094 18433121 -76839530 + AT_rich Low_complexity Low_complexity 1 27 0 5 725 1051 301 42 58 chr17 18433647 18434602 -76838049 + MYSERV6-int LTR ERVK 8092 8900 -59 5 725 1126 68 0 0 chr17 18436686 18436833 -76835818 - B1_Mm SINE Alu 0 147 1 5 725 432 0 0 0 chr17 18438462 18438510 -76834141 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 725 321 226 60 9 chr17 18438535 18438651 -76834000 + Lx9 LINE L1 7523 7644 0 5 725 25 0 0 0 chr17 18438659 18438684 -76833967 + AT_rich Low_complexity Low_complexity 1 25 0 5 725 1000 122 0 0 chr17 18438925 18439073 -76833578 - B1_Mus1 SINE Alu 0 148 1 5 725 28 48 0 0 chr17 18439128 18439170 -76833481 + AT_rich Low_complexity Low_complexity 1 42 0 5 725 27 0 0 0 chr17 18439183 18439210 -76833441 + AT_rich Low_complexity Low_complexity 1 27 0 5 725 569 196 0 0 chr17 18439339 18439451 -76833200 + ORR1B1 LTR MaLR 275 386 -8 5 725 219 69 0 0 chr17 18440177 18440206 -76832445 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 5 725 206 250 17 0 chr17 18440303 18440363 -76832288 + (CATA)n Simple_repeat Simple_repeat 4 64 0 5 725 24673 152 30 15 chr17 18442578 18445588 -76827063 - L1_Mus3 LINE L1 -6 6632 3579 5 725 210 37 0 0 chr17 18445588 18445615 -76827036 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 725 24673 165 12 22 chr17 18445615 18448147 -76824504 - L1_Mus3 LINE L1 -2305 3578 1100 5 725 195 69 0 0 chr17 18448147 18448176 -76824475 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 725 2527 211 23 131 chr17 18448176 18448826 -76823825 - L1_Mus3 LINE L1 -5558 1099 497 5 725 324 0 0 0 chr17 18448926 18448962 -76823689 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 725 5870 75 12 1 chr17 18449225 18450003 -76822648 + L1_Mus2 LINE L1 5780 6565 -1 5 725 335 402 41 58 chr17 18450684 18451048 -76821603 - ORR1D2 LTR MaLR -12 358 1 5 725 453 210 37 74 chr17 18451391 18451581 -76821070 + RMER17C LTR ERVK 95 277 -133 5 725 24 67 0 0 chr17 18451805 18451850 -76820801 + AT_rich Low_complexity Low_complexity 1 45 0 5 725 3591 183 52 62 chr17 18451850 18452659 -76819992 - Lx2 LINE L1 -6 6991 6191 5 725 1311 154 14 0 chr17 18452654 18452862 -76819789 - Lx2 LINE L1 -641 6356 6146 5 725 1687 171 111 126 chr17 18452927 18453468 -76819183 - RMER16 LTR ERVK 0 533 1 5 725 246 328 20 68 chr17 18454226 18454373 -76818278 - Lx8 LINE L1 -212 7261 7122 5 725 3264 29 0 3 chr17 18454426 18454814 -76817837 - L1Md_A LINE L1 -1 6581 6195 5 725 770 320 24 22 chr17 18454902 18455199 -76817452 + ORR1C2 LTR MaLR 46 353 -31 5 725 6171 212 25 5 chr17 18455211 18456803 -76815848 - Lx3C LINE L1 -44 6932 5310 5 725 892 231 4 25 chr17 18456795 18457039 -76815612 - Lx3C LINE L1 -889 4997 4759 5 725 364 186 14 0 chr17 18457027 18457097 -76815554 - Lx3C LINE L1 -2034 3843 3773 5 725 395 206 0 32 chr17 18457086 18457181 -76815470 + L1_Mur2 LINE L1 4203 4294 -1583 5 725 1658 160 25 6 chr17 18457853 18458167 -76814484 + L1_Mur2 LINE L1 4301 4620 -1257 5 725 23 55 0 18 chr17 18458219 18458242 -76814409 + AT_rich Low_complexity Low_complexity 1 23 0 5 725 1043 116 0 0 chr17 18458242 18458388 -76814263 - B1_Mus1 SINE Alu 0 148 3 5 725 23 55 0 18 chr17 18458388 18458419 -76814232 + AT_rich Low_complexity Low_complexity 1 31 0 5 725 462 18 0 0 chr17 18458449 18458504 -76814147 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 725 1801 185 19 0 chr17 18458797 18459116 -76813535 - ORR1A3 LTR MaLR 0 326 2 5 725 7622 200 44 76 chr17 18459117 18461145 -76811506 - ORR1A3-int LTR MaLR 0 1963 2 5 725 1568 220 9 0 chr17 18461146 18461469 -76811182 - ORR1A3 LTR MaLR 0 326 1 5 725 33 0 0 0 chr17 18465750 18465783 -76806868 + AT_rich Low_complexity Low_complexity 1 33 0 5 725 364 321 7 0 chr17 18465836 18465976 -76806675 - Lx3C LINE L1 -111 6865 6725 5 725 280 292 44 9 chr17 18465966 18466080 -76806571 - Lx4B LINE L1 -544 6514 6397 5 725 1217 218 83 2 chr17 18466356 18466816 -76805835 - Lx4A LINE L1 -505 6553 6057 5 725 1670 237 71 80 chr17 18466826 18467045 -76805606 + Lx4A LINE L1 6526 6726 -332 5 725 305 24 0 23 chr17 18467045 18467088 -76805563 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 5 725 1670 237 71 80 chr17 18467088 18467404 -76805247 + Lx4A LINE L1 6727 7056 -2 5 725 2564 77 105 3 chr17 18467642 18468005 -76804646 - MTB LTR MaLR 0 400 1 5 725 790 286 74 51 chr17 18468032 18468422 -76804229 + Lx9 LINE L1 6948 7346 -298 5 725 961 123 18 6 chr17 18468643 18468814 -76803837 + L1_Mus3 LINE L1 6466 6638 0 5 725 1051 88 0 13 chr17 18468902 18469052 -76803599 + B1_Mus1 SINE Alu 1 148 0 5 725 426 151 0 0 chr17 18469052 18469158 -76803493 + A-rich Low_complexity Low_complexity 1 106 0 5 725 618 14 0 0 chr17 18469256 18469327 -76803324 + (GA)n Simple_repeat Simple_repeat 2 72 0 5 725 3490 187 17 9 chr17 18469329 18470084 -76802567 - L1_Mur2 LINE L1 -478 5399 4639 5 725 2523 210 58 0 chr17 18470132 18470665 -76801986 + Lx4A LINE L1 6129 6692 -366 5 725 274 404 31 12 chr17 18471912 18472075 -76800576 - ETnERV2-int LTR ERVK -209 7197 7032 5 725 495 306 82 53 chr17 18472601 18472792 -76799859 - RNERVK23-int LTR ERVK -469 7748 7549 5 725 3045 20 0 3 chr17 18472792 18473139 -76799512 - ORR1A0 LTR MaLR 0 346 1 5 725 495 306 82 53 chr17 18473139 18473265 -76799386 - RNERVK23-int LTR ERVK -669 7548 7423 5 725 7834 59 9 1 chr17 18473341 18474588 -76798063 - L1Md_F2 LINE L1 -12 6570 5313 5 725 3008 323 59 55 chr17 18475464 18476163 -76796488 - RNERVK23-int LTR ERVK -2564 5653 4960 5 725 4482 81 32 0 chr17 18476163 18476779 -76795872 + L1Md_F2 LINE L1 5947 6582 0 5 725 3008 323 59 55 chr17 18476779 18478588 -76794063 - RNERVK23-int LTR ERVK -3258 4959 3129 5 725 3473 13 5 0 chr17 18478588 18478982 -76793669 - MTA_Mm LTR MaLR 0 396 1 5 725 3008 323 59 55 chr17 18478982 18479403 -76793248 - RNERVK23-int LTR ERVK -5089 3128 2711 5 725 307 329 7 7 chr17 18479555 18479693 -76792958 - RNERVK23-int LTR ERVK -5336 2344 2207 5 725 297 303 16 24 chr17 18479837 18479962 -76792689 - RNERVK23-int LTR ERVK -4340 1827 1704 5 725 257 122 24 0 chr17 18480053 18480094 -76792557 - RNERVK23-int LTR ERVK -4526 1641 1600 5 90 6466 125 21 15 chr17 18480770 18482353 -76790298 - L1_Mus3 LINE L1 -2 6636 5029 5 726 2886 110 0 28 chr17 18482335 18482792 -76789859 - MusHAL1 LINE L1 -854 1858 1415 5 726 34339 54 4 17 chr17 18482791 18488033 -76784618 + L1Md_F2 LINE L1 419 5586 -297 5 726 7713 58 3 1 chr17 18488033 18489012 -76783639 + L1Md_F2 LINE L1 5587 6567 -15 5 726 8052 127 14 17 chr17 18489022 18489976 -76782675 - L1_Mus3 LINE L1 -3250 2633 1671 5 726 270 0 0 0 chr17 18489976 18490006 -76782645 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 5 726 8052 126 10 8 chr17 18490006 18490588 -76782063 - L1_Mus3 LINE L1 -4213 1670 1099 5 726 216 0 0 0 chr17 18490588 18490612 -76782039 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 726 1356 137 15 0 chr17 18490612 18490703 -76781948 - L1_Mus3 LINE L1 -5452 1164 1071 5 726 399 167 0 13 chr17 18490640 18490719 -76781932 - L1VL2 LINE L1 -5499 836 759 5 726 1090 281 35 39 chr17 18490719 18491289 -76781362 + MYSERV6-int LTR ERVK 8129 8696 -263 5 726 308 259 0 12 chr17 18491431 18491513 -76781138 + MYSERV6-int LTR ERVK 8799 8879 -80 5 726 21 0 0 0 chr17 18493528 18493549 -76779102 + AT_rich Low_complexity Low_complexity 1 21 0 5 726 1005 133 7 0 chr17 18493557 18493700 -76778951 + B1_Mus2 SINE Alu 2 145 -2 5 726 470 232 6 0 chr17 18495426 18495590 -76777061 + (TG)n Simple_repeat Simple_repeat 2 166 0 5 726 264 265 51 0 chr17 18495620 18495737 -76776914 + Lx9 LINE L1 7522 7644 0 5 726 218 353 89 37 chr17 18496365 18496556 -76776095 - B3 SINE B2 -10 206 6 5 726 4762 155 18 9 chr17 18496702 18497550 -76775101 + RLTR22_Mur LTR ERVK 1 855 -993 5 726 344 353 17 88 chr17 18497747 18497986 -76774665 + RMER12 LTR ERVK 1101 1322 0 5 726 711 65 0 0 chr17 18498029 18498122 -76774529 + (TTCC)n Simple_repeat Simple_repeat 1 93 0 5 726 891 171 5 72 chr17 18498139 18498347 -76774304 - Lx3A LINE L1 -3 6978 6785 5 726 854 164 6 0 chr17 18498382 18498547 -76774104 + CT-rich Low_complexity Low_complexity 1 166 0 5 726 660 190 122 40 chr17 18498548 18498775 -76773876 - L1_Mur1 LINE L1 -1018 4868 4623 5 726 4350 112 9 1 chr17 18498816 18499462 -76773189 + L1_Mus3 LINE L1 5981 6631 -7 5 726 2517 188 13 6 chr17 18499471 18500000 -76772651 - L1_Mur1 LINE L1 -1220 4666 4134 5 726 1338 170 50 9 chr17 18500004 18500324 -76772327 - L1_Mur1 LINE L1 -1757 4129 3797 1 726 686 228 29 10 chr17 18500336 18500544 -76772107 + L1_Mur2 LINE L1 4210 4421 -1456 2 726 1908 217 94 119 chr17 18500548 18501365 -76771286 - ORR1A3-int LTR MaLR -781 1182 436 3 726 2167 20 0 0 chr17 18501367 18501614 -76771037 - L1Md_F2 LINE L1 -14 6568 6322 4 726 1620 233 3 3 chr17 18501818 18502206 -76770445 + Lx LINE L1 6181 6568 -86 5 726 313 156 0 15 chr17 18502211 18502276 -76770375 - RMER17D2 LTR ERVK -2 807 744 6 726 2738 48 29 63 chr17 18502279 18502657 -76769994 + RLTR10B2 LTR ERVK 1 365 0 7 726 1214 63 0 0 chr17 18502668 18502827 -76769824 + RLTR10-int LTR ERVK 42 200 -1787 7 726 252 291 0 0 chr17 18502827 18502882 -76769769 + RLTR27 LTR ERVK 221 275 -34 8 726 301 116 0 0 chr17 18502882 18502925 -76769726 + RLTR10-int LTR ERVK 225 267 -7314 7 726 443 98 34 43 chr17 18503013 18503130 -76769521 + GA-rich Low_complexity Low_complexity 3 118 0 9 726 2554 65 102 37 chr17 18503130 18503279 -76769372 + RLTR10-int LTR ERVK 566 755 -1232 7 726 6868 39 1 0 chr17 18503279 18504099 -76768552 + L1Md_T LINE L1 5762 6582 0 1 726 2554 65 102 37 chr17 18504099 18504350 -76768301 + RLTR10-int LTR ERVK 756 992 -995 7 726 351 316 21 21 chr17 18504490 18504681 -76767970 + IAP-d-int LTR ERVK 822 1012 -5530 1 726 767 69 0 0 chr17 18504982 18505084 -76767567 + BGLII LTR ERVK 1 102 -319 1 726 634 144 10 0 chr17 18505081 18505185 -76767466 + BGLII LTR ERVK 317 421 0 1 726 471 97 0 27 chr17 18505592 18505666 -76766985 + RMER3D-int LTR ERVK 489 560 -2282 1 726 360 0 0 0 chr17 18505666 18505706 -76766945 + (T)n Simple_repeat Simple_repeat 1 40 0 1 726 1215 54 0 0 chr17 18505706 18505853 -76766798 - B1_Mm SINE Alu 0 147 1 1 726 184 157 39 19 chr17 18505881 18505933 -76766718 + A-rich Low_complexity Low_complexity 3 55 0 1 726 1659 181 147 33 chr17 18505978 18506322 -76766329 + RMER3D-int LTR ERVK 1014 1399 -1443 1 726 3987 21 51 0 chr17 18506322 18506791 -76765860 - MT2_Mm LTR ERVL 0 493 1 1 726 1659 190 2 41 chr17 18506791 18506932 -76765719 + RMER3D-int LTR ERVK 1400 1533 -1309 1 726 473 175 35 55 chr17 18506968 18507113 -76765538 + RMER3D-int LTR ERVK 1538 1679 -1163 1 726 2998 206 39 47 chr17 18507132 18508056 -76764595 + RMER3D-int LTR ERVK 1925 2841 -1 1 726 2812 117 2 5 chr17 18508057 18508479 -76764172 + BGLII LTR ERVK 1 421 0 1 726 452 312 27 43 chr17 18508646 18508830 -76763821 + Lx5 LINE L1 6853 7033 -17 1 726 1205 333 69 24 chr17 18508996 18509823 -76762828 + RMER1B Other Other 2 917 -149 1 726 848 127 0 7 chr17 18509835 18509978 -76762673 + (TTC)n Simple_repeat Simple_repeat 1 142 0 2 726 396 235 14 64 chr17 18509979 18510120 -76762531 + RMER1B Other Other 924 1057 -9 1 726 1081 82 0 20 chr17 18510123 18510273 -76762378 + B1_Mm SINE Alu 1 147 0 2 726 201 39 0 0 chr17 18510327 18510353 -76762298 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2 726 2558 122 8 18 chr17 18510725 18511124 -76761527 + MTB LTR MaLR 3 397 -3 2 726 393 198 101 25 chr17 18511383 18511502 -76761149 + RMER15 LTR ERVL 337 464 -111 2 726 346 218 9 9 chr17 18511506 18511617 -76761034 + GA-rich Low_complexity Low_complexity 3 113 0 2 726 265 376 67 50 chr17 18511860 18512098 -76760553 + MTE-int LTR MaLR 820 1061 -519 2 726 13443 156 34 10 chr17 18512102 18513437 -76759214 + L1VL2 LINE L1 14 1336 -2279 2 726 180 0 0 0 chr17 18513437 18513457 -76759194 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 2 726 13443 109 11 6 chr17 18513457 18515293 -76757358 + L1VL2 LINE L1 1337 3182 -433 2 726 387 307 136 25 chr17 18515333 18515577 -76757074 + Lx3C LINE L1 6729 6996 -4 2 726 21 0 0 0 chr17 18516204 18516225 -76756426 + AT_rich Low_complexity Low_complexity 1 21 0 3 726 363 159 22 22 chr17 18516940 18517030 -76755621 - Lx LINE L1 0 6654 6565 3 726 4314 140 73 22 chr17 18517030 18517836 -76754815 + RMER17A2 LTR ERVK 1 847 -59 3 726 729 82 0 0 chr17 18517839 18517937 -76754714 - RLTR10B2 LTR ERVK 0 365 268 3 726 1698 180 178 83 chr17 18517937 18518470 -76754181 - RLTR6_Mm LTR ERV1 -70 584 1 3 726 58750 34 12 0 chr17 18518470 18526039 -76746612 - RLTR6-int LTR ERV1 0 7778 1 3 726 1733 184 168 78 chr17 18526040 18526593 -76746058 - RLTR6_Mm LTR ERV1 -51 603 1 3 726 236 0 0 0 chr17 18526593 18526621 -76746030 - RLTR10B2 LTR ERVK -94 271 244 3 726 720 0 0 0 chr17 18526771 18526851 -76745800 + (TTC)n Simple_repeat Simple_repeat 2 81 0 3 726 407 255 68 40 chr17 18527595 18527855 -76744796 + L1M2 LINE L1 4989 5293 -853 3 726 209 231 0 37 chr17 18528667 18528721 -76743930 + L2c LINE L2 3335 3386 -1 3 726 761 56 0 9 chr17 18529073 18529181 -76743470 + (TCTA)n Simple_repeat Simple_repeat 4 110 0 4 726 1115 67 27 0 chr17 18529182 18529331 -76743320 - B2_Mm2 SINE B2 -41 154 2 4 726 29 47 0 0 chr17 18529375 18529418 -76743233 + AT_rich Low_complexity Low_complexity 1 43 0 4 726 282 152 0 0 chr17 18529565 18529611 -76743040 + Lx5 LINE L1 6533 6578 -472 4 726 353 251 81 21 chr17 18529624 18529877 -76742774 + L1_Mur3 LINE L1 1070 1343 -6385 4 726 1908 282 12 33 chr17 18529874 18530269 -76742382 + L1_Mur3 LINE L1 1665 2057 -3820 4 726 288 53 0 0 chr17 18530269 18530307 -76742344 + (CCA)n Simple_repeat Simple_repeat 1 38 0 4 726 1908 282 12 33 chr17 18530307 18530709 -76741942 + L1_Mur3 LINE L1 2058 2446 -3431 4 726 3675 198 72 4 chr17 18530705 18531672 -76740979 - L1_Mur2 LINE L1 -492 5385 4353 4 726 1740 242 16 2 chr17 18531663 18532111 -76740540 + Lx2 LINE L1 5896 6349 -651 4 726 1809 183 15 0 chr17 18532116 18532449 -76740202 - Lx2 LINE L1 -2 6995 6658 4 726 676 135 0 50 chr17 18532449 18532589 -76740062 + MusHAL1 LINE L1 1436 1568 -1144 4 726 2544 226 14 25 chr17 18532586 18533223 -76739428 + Lx2 LINE L1 6333 6962 -35 4 726 339 171 43 0 chr17 18533223 18533301 -76739350 + ORR1A2 LTR MaLR 275 421 0 5 726 3307 242 136 77 chr17 18533301 18533994 -76738657 + ORR1A2-int LTR MaLR 1 1308 -484 5 726 4032 143 125 11 chr17 18533994 18534383 -76738268 - RMER17D2 LTR ERVK 0 809 392 5 726 1040 88 12 12 chr17 18534383 18534556 -76738095 + (GGAGA)n Simple_repeat Simple_repeat 1 173 0 5 726 4032 143 125 11 chr17 18534556 18534892 -76737759 - RMER17D2 LTR ERVK -418 391 1 5 726 3307 212 170 66 chr17 18534892 18535277 -76737374 + ORR1A2-int LTR MaLR 1309 1650 -142 5 726 1197 68 0 0 chr17 18535277 18535425 -76737226 - B1_Mus1 SINE Alu 0 148 1 5 726 3307 212 170 66 chr17 18535425 18535577 -76737074 + ORR1A2-int LTR MaLR 1651 1792 0 5 726 1547 186 49 23 chr17 18535577 18535885 -76736766 + ORR1A2 LTR MaLR 1 316 -11 5 726 5194 245 36 15 chr17 18535901 18537287 -76735364 + L1_Mur3 LINE L1 3384 4815 -1062 4 726 917 206 35 86 chr17 18537287 18537626 -76735025 + RLTRETN_Mm LTR ERVK 1 322 0 5 726 5194 245 36 15 chr17 18537626 18538005 -76734646 + L1_Mur3 LINE L1 4816 5186 -691 4 726 823 267 20 16 chr17 18538038 18538289 -76734362 - Lx4A LINE L1 -7 7051 6800 5 726 841 163 0 0 chr17 18538294 18538447 -76734204 + Lx4A LINE L1 6544 6696 -362 5 726 369 222 0 0 chr17 18538451 18538523 -76734128 - Lx4A LINE L1 -543 6515 6444 5 726 3603 67 24 0 chr17 18538523 18538987 -76733664 + MT2C_Mm LTR ERVL 1 475 0 5 726 40054 63 9 11 chr17 18538987 18544368 -76728283 + MERVL-int LTR ERVL 1 5371 -114 5 726 319 167 26 53 chr17 18544368 18544444 -76728207 + ORR1A3-int LTR MaLR 567 640 -1323 5 726 258 53 0 0 chr17 18544444 18544482 -76728169 + MERVL-int LTR ERVL 5448 5485 0 5 726 1289 45 73 0 chr17 18544482 18544659 -76727992 + MT2C_Mm LTR ERVL 1 190 -285 5 726 502 188 20 0 chr17 18544660 18544761 -76727890 - Lx4A LINE L1 -618 6440 6338 5 726 5230 197 43 7 chr17 18544770 18545342 -76727309 + L1_Mur2 LINE L1 1467 2063 -3814 5 726 387 0 0 0 chr17 18545342 18545385 -76727266 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 726 5230 197 43 7 chr17 18545385 18546125 -76726526 + L1_Mur2 LINE L1 2064 2826 -3051 5 726 300 231 0 63 chr17 18546117 18546144 -76726507 + L1_Mur2 LINE L1 5179 5205 -675 5 726 2640 213 65 20 chr17 18546144 18546806 -76725845 + RLTR17 LTR ERVK 1 692 0 6 726 300 231 0 63 chr17 18546806 18546889 -76725762 + L1_Mur2 LINE L1 5206 5282 -598 5 726 647 224 11 21 chr17 18547107 18547294 -76725357 - Lx2A LINE L1 -5 7003 6819 6 726 1698 135 70 88 chr17 18547302 18547675 -76724976 + RLTR9C LTR ERVK 28 393 0 6 726 1403 184 83 86 chr17 18547676 18548384 -76724267 + ETnERV2-int LTR ERVK 1075 1463 -5943 6 726 300 83 0 0 chr17 18548384 18548432 -76724219 + (A)n Simple_repeat Simple_repeat 1 48 0 6 726 346 108 25 63 chr17 18548434 18548513 -76724138 + ETnERV2-int LTR ERVK 2474 2549 -4695 6 726 4940 113 39 43 chr17 18548513 18549395 -76723256 - RLTR13A3 LTR ERVK 0 978 1 6 726 3144 164 68 10 chr17 18549395 18550071 -76722580 + ETnERV2-int LTR ERVK 1530 2244 -5162 6 726 666 144 8 25 chr17 18550061 18550182 -76722469 + ETnERV2-int LTR ERVK 2493 2611 -4795 6 726 665 160 22 40 chr17 18550157 18550382 -76722269 + ETnERV2-int LTR ERVK 2975 3135 -4271 6 726 2449 103 38 10 chr17 18550382 18550773 -76721878 + RLTR13D1 LTR ERVK 249 650 -156 6 726 3470 128 17 5 chr17 18551102 18551684 -76720967 + ETnERV2-int LTR ERVK 3442 4030 -3376 6 726 3350 195 28 60 chr17 18551684 18553086 -76719565 + ETnERV2-int LTR ERVK 2350 3749 -1095 6 726 430 97 42 0 chr17 18553299 18553371 -76719280 + ETnERV2-int LTR ERVK 7331 7405 -1 6 726 2169 142 22 80 chr17 18553372 18553786 -76718865 + RLTR9C LTR ERVK 1 390 -3 6 726 1095 200 38 0 chr17 18553794 18554029 -76718622 - Lx2A LINE L1 -887 6121 5878 6 726 620 310 30 46 chr17 18555165 18555536 -76717115 + MYSERV6-int LTR ERVK 2142 2447 -730 6 726 575 278 73 40 chr17 18555990 18556296 -76716355 + MYSERV6-int LTR ERVK 2490 2810 -6149 6 726 3015 3 0 0 chr17 18556296 18556630 -76716021 + L1Md_T LINE L1 6249 6582 0 7 726 673 278 73 40 chr17 18556630 18556721 -76715930 + MYSERV6-int LTR ERVK 2811 2900 -6059 6 726 765 286 15 4 chr17 18556721 18556988 -76715663 + MYSERV6-int LTR ERVK 4120 4389 -4570 6 726 457 254 74 68 chr17 18557604 18557794 -76714857 + MYSERV6-int LTR ERVK 4843 5033 -1517 6 726 414 255 133 46 chr17 18557883 18558056 -76714595 + RMER4A LTR ERVK 252 439 -27 7 726 336 34 17 33 chr17 18558281 18558341 -76714310 + (TTTG)n Simple_repeat Simple_repeat 1 59 0 7 726 600 212 0 0 chr17 18558612 18558744 -76713907 + CT-rich Low_complexity Low_complexity 1 132 0 7 726 1037 96 7 0 chr17 18558744 18558890 -76713761 - B1_Mus2 SINE Alu 0 147 1 7 726 1314 57 28 6 chr17 18559115 18559292 -76713359 + B2_Mm1a SINE B2 2 182 -11 7 726 204 40 0 0 chr17 18559292 18559317 -76713334 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 7 726 264 82 49 0 chr17 18559429 18559490 -76713161 + (TTTG)n Simple_repeat Simple_repeat 2 65 0 7 726 736 80 107 0 chr17 18559559 18559671 -76712980 + B1_Mm SINE Alu 24 147 0 7 726 191 103 26 0 chr17 18559672 18559711 -76712940 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 7 726 897 281 64 84 chr17 18559725 18560505 -76712146 + MYSERV6-int LTR ERVK 8212 8686 -273 6 726 23 68 0 0 chr17 18562388 18562432 -76710219 + AT_rich Low_complexity Low_complexity 1 44 0 8 726 180 77 0 0 chr17 18563596 18563622 -76709029 + (TG)n Simple_repeat Simple_repeat 1 26 0 8 726 330 314 0 0 chr17 18563640 18563745 -76708906 + (TG)n Simple_repeat Simple_repeat 2 106 0 8 726 245 252 51 17 chr17 18563767 18563884 -76708767 + Lx9 LINE L1 7522 7642 -2 8 726 7940 52 13 0 chr17 18564282 18565874 -76706777 - L1Md_F2 LINE L1 -2 6580 4965 8 726 1452 182 83 212 chr17 18565874 18566187 -76706464 + RLTR22_Mur LTR ERVK 143 486 -1362 8 726 1017 99 0 0 chr17 18566187 18566328 -76706323 + B1_Mus1 SINE Alu 1 141 -7 8 726 1452 182 83 212 chr17 18566328 18566580 -76706071 + RLTR22_Mur LTR ERVK 487 635 -1213 8 726 1100 157 17 39 chr17 18566717 18566922 -76705729 + RLTR22_Mur LTR ERVK 629 830 -1018 8 726 246 32 0 0 chr17 18566922 18566953 -76705698 + (TTG)n Simple_repeat Simple_repeat 2 32 0 8 726 1100 157 17 39 chr17 18566953 18566979 -76705672 + RLTR22_Mur LTR ERVK 831 855 -993 8 726 297 335 42 42 chr17 18567188 18567356 -76705295 + RMER12 LTR ERVK 1093 1260 -62 8 726 2818 61 0 0 chr17 18567697 18568043 -76704608 + ORR1A1 LTR MaLR 1 346 0 8 726 297 0 0 0 chr17 18569015 18569048 -76703603 + (TC)n Simple_repeat Simple_repeat 2 34 0 8 726 348 24 0 0 chr17 18569048 18569088 -76703563 + (TA)n Simple_repeat Simple_repeat 2 42 0 9 726 874 259 156 9 chr17 18570542 18570869 -76701782 + ORR1B1 LTR MaLR 20 394 0 9 726 201 121 0 0 chr17 18570926 18570959 -76701692 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 9 726 3228 288 127 11 chr17 18570959 18572262 -76700389 + ORR1B1-int LTR MaLR 55 1509 0 9 726 1369 284 16 5 chr17 18572262 18572644 -76700007 + ORR1B1 LTR MaLR 1 386 -8 9 726 5012 88 60 11 chr17 18572850 18573596 -76699055 - RLTR13C2 LTR ERVK -25 783 1 9 726 225 252 98 127 chr17 18573929 18573986 -76698665 + MT2B2 LTR ERVL 102 238 -346 9 726 267 402 0 29 chr17 18573986 18574091 -76698560 + B1_Mus2 SINE Alu 1 102 -45 9 726 225 252 98 127 chr17 18574091 18574102 -76698549 + MT2B2 LTR ERVL 239 269 -315 9 726 1431 12 31 4 chr17 18574166 18575237 -76697414 + (TCTA)n Simple_repeat Simple_repeat 1 1100 0 9 726 1160 62 0 0 chr17 18575388 18575533 -76697118 + B1_Mm SINE Alu 3 147 0 9 726 192 77 0 0 chr17 18575561 18575587 -76697064 + (CAAG)n Simple_repeat Simple_repeat 2 27 0 9 726 23 86 0 0 chr17 18579167 18579225 -76693426 + AT_rich Low_complexity Low_complexity 1 58 0 9 726 3699 208 26 12 chr17 18579825 18580663 -76691988 - Lx2 LINE L1 -2 6995 6146 1 726 26 0 0 0 chr17 18581000 18581026 -76691625 + AT_rich Low_complexity Low_complexity 1 26 0 1 726 180 0 0 0 chr17 18581878 18581898 -76690753 + (T)n Simple_repeat Simple_repeat 1 20 0 1 726 276 244 24 12 chr17 18582009 18582092 -76690559 - Lx3C LINE L1 -3 6973 6890 1 726 1739 208 24 6 chr17 18582081 18582544 -76690107 - Lx2 LINE L1 -989 5984 5516 1 726 243 167 48 0 chr17 18582548 18582590 -76690061 - Lx LINE L1 -549 6105 6062 1 726 245 188 109 0 chr17 18582583 18582647 -76690004 - Lx2 LINE L1 -490 5396 5326 1 726 4709 206 22 43 chr17 18582640 18582940 -76689711 - Lx2 LINE L1 -888 4998 4745 1 726 189 0 0 0 chr17 18582940 18582961 -76689690 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 726 4709 206 22 43 chr17 18582961 18583902 -76688749 - Lx2 LINE L1 -1142 4744 3782 1 726 1483 230 20 7 chr17 18583899 18584306 -76688345 + L1_Mur2 LINE L1 4211 4622 -1255 1 726 25 31 0 0 chr17 18584346 18584378 -76688273 + AT_rich Low_complexity Low_complexity 1 32 0 1 726 363 60 0 0 chr17 18584402 18584452 -76688199 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 726 24 106 0 0 chr17 18584639 18584733 -76687918 + AT_rich Low_complexity Low_complexity 1 94 0 1 726 1562 225 9 0 chr17 18584749 18585064 -76687587 - ORR1A2 LTR MaLR -9 318 1 1 726 6825 227 57 78 chr17 18585064 18587037 -76685614 - ORR1A2-int LTR MaLR 0 1963 31 1 726 1464 218 28 19 chr17 18587064 18587387 -76685264 - ORR1A2 LTR MaLR 0 326 1 1 726 256 256 0 0 chr17 18589450 18589528 -76683123 + T-rich Low_complexity Low_complexity 1 78 0 1 726 1166 214 138 6 chr17 18589696 18590007 -76682644 + Lx4A LINE L1 6705 7056 -2 1 726 224 200 33 16 chr17 18590010 18590071 -76682580 + A-rich Low_complexity Low_complexity 3 64 0 1 726 468 332 61 40 chr17 18590238 18590664 -76681987 + Lx9 LINE L1 6912 7346 -298 1 726 355 167 15 0 chr17 18590999 18591065 -76681586 - L1_Mur2 LINE L1 -499 5378 5312 1 726 4036 123 52 48 chr17 18591079 18591297 -76681354 - RMER17A LTR ERVK -3 955 555 1 726 450 0 0 0 chr17 18591297 18591347 -76681304 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 726 4036 109 55 45 chr17 18591347 18591869 -76680782 - RMER17A LTR ERVK -197 554 1 1 726 4608 58 10 5 chr17 18591869 18592461 -76680190 - RMER17A-int LTR ERVK 0 1728 1134 1 726 2489 69 13 0 chr17 18592457 18592774 -76679877 - RMER17A-int LTR ERVK -1406 322 2 1 726 4187 113 24 56 chr17 18592816 18593572 -76679079 - RMER17A LTR ERVK -17 734 3 1 726 2326 244 40 2 chr17 18593574 18594117 -76678534 + Lx4A LINE L1 6445 7008 -50 1 726 396 172 0 0 chr17 18594222 18594309 -76678342 + (TATG)n Simple_repeat Simple_repeat 2 88 0 1 726 2375 41 0 3 chr17 18594644 18594938 -76677713 - L1Md_F3 LINE L1 -2 6582 6290 1 726 265 282 35 0 chr17 18595775 18595860 -76676791 + RLTR45-int LTR ERVK 181 268 -6976 1 726 2235 254 64 2 chr17 18595871 18596436 -76676215 + Lx4A LINE L1 6409 7008 -50 1 726 228 258 0 0 chr17 18596523 18596620 -76676031 + (TATG)n Simple_repeat Simple_repeat 2 98 0 1 726 225 273 58 13 chr17 18596637 18596793 -76675858 + (TCTA)n Simple_repeat Simple_repeat 2 164 0 1 726 1195 42 7 0 chr17 18596829 18596973 -76675678 + B1_Mm SINE Alu 3 147 0 1 726 423 0 0 0 chr17 18596993 18597040 -76675611 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 726 976 77 7 7 chr17 18598115 18598259 -76674392 + (TTTTC)n Simple_repeat Simple_repeat 2 145 0 1 726 312 230 11 22 chr17 18598265 18598354 -76674297 + CT-rich Low_complexity Low_complexity 1 88 0 1 726 409 242 94 24 chr17 18598354 18598481 -76674170 - RMER15 LTR ERVL -103 472 337 1 726 271 216 52 39 chr17 18598605 18598682 -76673969 - RMER15 LTR ERVL -472 103 26 1 726 1595 294 110 25 chr17 18599065 18599236 -76673415 - RMER1B Other Other -5 1061 881 1 726 1515 177 59 36 chr17 18599236 18599594 -76673057 - RLTR9A LTR ERVK 0 368 3 1 726 1595 313 101 25 chr17 18599594 18600359 -76672292 - RMER1B Other Other -186 880 3 1 726 434 389 9 23 chr17 18600526 18600747 -76671904 - Lx5 LINE L1 -19 7031 6814 1 726 222 37 0 0 chr17 18601160 18601187 -76671464 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 726 352 324 83 75 chr17 18601952 18602459 -76670192 + L1M2 LINE L1 4869 5379 -764 1 726 253 142 22 108 chr17 18602700 18602773 -76669878 + L1_Rod LINE L1 5615 5689 -191 1 726 206 32 0 31 chr17 18603137 18603169 -76669482 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 1 726 267 86 0 79 chr17 18603250 18603326 -76669325 + A-rich Low_complexity Low_complexity 3 72 0 1 726 544 167 0 29 chr17 18603360 18603465 -76669186 + Lx4B LINE L1 5689 5790 -87 1 726 7479 157 23 18 chr17 18603465 18605172 -76667479 + Lx3_Mus LINE L1 5300 7009 0 1 726 2852 264 18 14 chr17 18605195 18605685 -76666966 + Lx4B LINE L1 5783 6277 -781 1 726 2356 11 0 0 chr17 18605685 18605953 -76666698 + L1Md_A LINE L1 6315 6582 0 1 726 2852 264 18 14 chr17 18605953 18606254 -76666397 + Lx4B LINE L1 6278 6577 -481 1 726 3850 259 63 65 chr17 18606246 18608196 -76664455 + L1_Mur2 LINE L1 1314 3258 -2619 1 726 1582 193 7 0 chr17 18608313 18608593 -76664058 + ORR1A2 LTR MaLR 3 284 -43 1 726 327 152 51 0 chr17 18608595 18608654 -76663997 - Lx2A LINE L1 -1102 5906 5845 1 726 1706 169 41 0 chr17 18608655 18608969 -76663682 + ORR1A2 LTR MaLR 1 327 0 1 726 2803 206 11 5 chr17 18608969 18609525 -76663126 + ORR1A2-int LTR MaLR 1 559 -1404 1 726 551 256 25 25 chr17 18609488 18609648 -76663003 + MT2B LTR ERVL 128 287 -314 1 726 270 136 0 0 chr17 18609865 18609909 -76662742 + (GGAGAA)n Simple_repeat Simple_repeat 5 48 0 1 726 236 291 62 25 chr17 18609915 18609996 -76662655 + B1F2 SINE Alu 42 125 -24 1 726 4856 216 39 20 chr17 18609946 18610519 -76662132 + ORR1A2-int LTR MaLR 797 1373 -590 1 726 3048 66 8 0 chr17 18610519 18610912 -76661739 - MTA_Mm LTR MaLR 0 396 1 1 726 4856 216 39 20 chr17 18610912 18611483 -76661168 + ORR1A2-int LTR MaLR 1374 1963 0 1 726 1554 186 15 58 chr17 18611483 18611825 -76660826 + ORR1A2 LTR MaLR 1 327 0 1 90 2414 273 61 6 chr17 18611829 18612803 -76659848 + L1_Mur2 LINE L1 3383 4409 -1468 1 727 1349 246 26 14 chr17 18612803 18613220 -76659431 + L1_Mur2 LINE L1 4765 5186 -691 1 727 339 85 0 0 chr17 18613236 18613283 -76659368 + (T)n Simple_repeat Simple_repeat 1 47 0 1 727 734 239 29 19 chr17 18613867 18614072 -76658579 - Lx4A LINE L1 -7 7051 6845 1 727 2121 118 3 0 chr17 18614069 18614398 -76658253 - L1_Mm LINE L1 -2533 3350 3021 1 727 7034 92 7 6 chr17 18614419 18615398 -76657253 + L1_Mus2 LINE L1 5587 6566 0 1 727 2150 241 21 6 chr17 18615425 18615946 -76656705 - Lx4A LINE L1 -198 6860 6332 1 727 5244 199 43 27 chr17 18615940 18616522 -76656129 + L1_Mur2 LINE L1 1456 2061 -3816 1 727 423 0 0 0 chr17 18616522 18616569 -76656082 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 727 5244 199 43 27 chr17 18616569 18617337 -76655314 + L1_Mur2 LINE L1 2062 2828 -3049 1 727 431 207 9 26 chr17 18617327 18617441 -76655210 + L1_Mur2 LINE L1 5180 5291 -589 1 727 232 180 20 0 chr17 18617928 18617978 -76654673 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 727 232 365 107 27 chr17 18618518 18618667 -76653984 - MTE2a LTR MaLR 0 379 219 1 727 4880 165 28 4 chr17 18619119 18620071 -76652580 - Lx3_Mus LINE L1 -1 7008 6034 1 727 501 17 0 0 chr17 18620356 18620414 -76652237 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 727 264 256 26 0 chr17 18620481 18620559 -76652092 + ORR1A3 LTR MaLR 6 85 -241 1 727 2942 34 0 0 chr17 18620559 18620976 -76651675 - L1_Mm LINE L1 -4296 1587 1171 1 727 25436 84 16 19 chr17 18620974 18621328 -76651323 + L1_Mm LINE L1 1615 1968 -3915 1 727 369 43 0 0 chr17 18621328 18621375 -76651276 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 727 25436 84 16 19 chr17 18621375 18623513 -76649138 + L1_Mm LINE L1 1969 4103 -1780 1 727 4168 35 0 0 chr17 18623513 18624006 -76648645 - L1Md_T LINE L1 0 6582 6090 1 727 25436 84 16 19 chr17 18624006 18625246 -76647405 + L1_Mm LINE L1 4104 5337 -546 1 727 366 228 44 0 chr17 18625243 18625357 -76647294 + L1_Mus4 LINE L1 6516 6634 -2 1 727 377 279 46 21 chr17 18625436 18625630 -76647021 + RLTR19-int LTR ERVK 2330 2528 -3609 1 727 23 0 0 0 chr17 18625648 18625671 -76646980 + AT_rich Low_complexity Low_complexity 1 23 0 1 727 836 296 31 36 chr17 18625717 18626134 -76646517 + MYSERV6-int LTR ERVK 8279 8693 -266 1 727 4824 97 19 1 chr17 18626295 18626987 -76645664 - L1_Mus2 LINE L1 -1 6565 5862 1 727 1412 194 16 40 chr17 18626989 18627364 -76645287 - L1_Mur2 LINE L1 -1733 4153 3788 1 727 694 242 38 9 chr17 18627359 18627572 -76645079 + L1_Mur2 LINE L1 4203 4421 -1456 1 727 3606 238 45 96 chr17 18627576 18628821 -76643830 - ORR1A2-int LTR MaLR -781 1182 2 1 727 1344 254 13 0 chr17 18628826 18629141 -76643510 - ORR1A2 LTR MaLR -8 319 1 1 727 24 53 0 0 chr17 18629171 18629209 -76643442 + AT_rich Low_complexity Low_complexity 1 38 0 1 727 21 0 0 0 chr17 18629993 18630014 -76642637 + AT_rich Low_complexity Low_complexity 1 21 0 1 727 2061 221 10 17 chr17 18630044 18630523 -76642128 + Lx LINE L1 6179 6654 0 1 727 2487 116 34 12 chr17 18630811 18631223 -76641428 - BGLII LTR ERVK 0 421 1 1 727 251 304 47 68 chr17 18631988 18632136 -76640515 + Lx7 LINE L1 5621 5765 -1931 1 727 286 174 48 0 chr17 18633092 18633156 -76639495 + Lx4A LINE L1 6549 6623 -435 1 727 357 271 128 35 chr17 18633158 18633384 -76639267 + L1_Mur2 LINE L1 1004 1316 -6412 1 727 1537 286 6 47 chr17 18633403 18633793 -76638858 + L1_Mur2 LINE L1 1665 2047 -3830 1 727 435 19 0 0 chr17 18633793 18633845 -76638806 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 727 1537 286 6 47 chr17 18633845 18634110 -76638541 + L1_Mur2 LINE L1 2048 2293 -3584 1 727 1001 253 19 4 chr17 18634108 18634366 -76638285 + Lx2 LINE L1 6078 6339 -661 1 727 3243 43 54 16 chr17 18634412 18634858 -76637793 + IAPLTR2_Mm LTR ERVK 1 463 -12 1 727 424 89 111 122 chr17 18634868 18634958 -76637693 + IAPEz-int LTR ERVK 35 123 -6358 1 727 227 267 0 0 chr17 18634958 18635003 -76637648 + RLTR27 LTR ERVK 231 275 -34 1 727 3444 67 1 22 chr17 18635003 18635585 -76637066 + IAPEz-int LTR ERVK 168 662 -5819 1 727 2706 67 0 3 chr17 18635585 18635928 -76636723 + IAPEz-int LTR ERVK 1359 1700 -4781 1 727 6889 38 2 6 chr17 18635923 18636753 -76635898 + IAPEz-int LTR ERVK 5653 6479 -2 1 727 3544 33 54 26 chr17 18636755 18637217 -76635434 + IAPLTR2_Mm LTR ERVK 1 475 0 1 727 1661 201 16 0 chr17 18637217 18637521 -76635130 - Lx2 LINE L1 -31 6966 6658 1 727 609 183 0 72 chr17 18637512 18637665 -76634986 + MusHAL1 LINE L1 1427 1568 -1144 1 727 2585 242 13 11 chr17 18637662 18638271 -76634380 + Lx2 LINE L1 6333 6942 -55 1 727 23 33 0 0 chr17 18638276 18638306 -76634345 + AT_rich Low_complexity Low_complexity 1 30 0 1 727 348 146 0 0 chr17 18638310 18638365 -76634286 + ORR1A2 LTR MaLR 272 326 0 1 727 808 221 14 39 chr17 18638365 18638572 -76634079 + ORR1A2-int LTR MaLR 1 202 -1761 1 727 5422 204 20 6 chr17 18638590 18639694 -76632957 + ORR1A2-int LTR MaLR 845 1963 0 1 727 432 209 11 11 chr17 18639694 18639786 -76632865 + ORR1A2 LTR MaLR 1 92 -235 1 727 965 214 170 14 chr17 18639789 18639811 -76632840 + RLTR17 LTR ERVK 351 372 -320 1 727 579 15 0 0 chr17 18639811 18639879 -76632772 + (TG)n Simple_repeat Simple_repeat 2 69 0 1 727 965 214 170 14 chr17 18639879 18640150 -76632501 + RLTR17 LTR ERVK 373 689 -3 1 727 363 197 0 11 chr17 18640153 18640249 -76632402 + Lx4A LINE L1 5201 5297 -589 1 727 3574 189 57 22 chr17 18640464 18642115 -76630536 - Lx2A LINE L1 -13 6995 5294 1 727 230 83 82 14 chr17 18642115 18642188 -76630463 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 727 909 147 12 7 chr17 18643501 18643663 -76628988 - L1_Mus3 LINE L1 -403 5781 5594 1 727 3044 142 27 7 chr17 18643639 18644193 -76628458 + MusHAL1 LINE L1 1866 2430 -282 1 727 23 78 0 0 chr17 18644290 18644341 -76628310 + AT_rich Low_complexity Low_complexity 1 51 0 1 727 2791 255 47 18 chr17 18644708 18645590 -76627061 + Lx4A LINE L1 5695 6601 -457 1 727 25 31 0 0 chr17 18645746 18645778 -76626873 + AT_rich Low_complexity Low_complexity 1 32 0 1 727 1002 282 38 26 chr17 18645780 18646359 -76626292 + L1_Mur2 LINE L1 1257 1842 -4038 1 727 24 0 0 0 chr17 18646359 18646383 -76626268 + AT_rich Low_complexity Low_complexity 1 24 0 1 727 26237 126 36 10 chr17 18646383 18648657 -76623994 - L1_Mus2 LINE L1 0 6654 4235 1 727 1769 150 76 91 chr17 18648657 18649054 -76623597 + RLTR9C LTR ERVK 1 391 -2 1 727 26237 136 29 12 chr17 18649054 18651180 -76621471 - L1_Mus2 LINE L1 -1649 4234 2072 1 727 180 77 0 0 chr17 18651180 18651206 -76621445 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 727 26237 182 36 124 chr17 18651206 18653141 -76619510 - L1_Mus2 LINE L1 -3812 2071 279 1 727 1395 279 10 53 chr17 18653161 18653782 -76618869 + L1_Mur2 LINE L1 1853 2446 -3431 1 727 4104 225 12 8 chr17 18653780 18654808 -76617843 - L1_Mur2 LINE L1 -493 5384 4353 2 727 1288 260 91 2 chr17 18654800 18655217 -76617434 + Lx2B LINE L1 5897 6350 -647 2 727 1648 213 6 0 chr17 18655218 18655556 -76617095 - Lx2 LINE L1 0 6997 6658 2 727 2634 108 2 38 chr17 18655592 18656016 -76616635 + RLTR9E LTR ERVK 1 409 0 2 727 716 252 110 55 chr17 18656017 18656382 -76616269 + ETnERV2-int LTR ERVK 3 387 -2927 2 727 5982 223 79 74 chr17 18656393 18660756 -76611895 + ETnERV2-int LTR ERVK 1072 6429 -977 2 727 328 154 0 0 chr17 18660967 18661019 -76611632 + ETnERV2-int LTR ERVK 7331 7382 -24 2 727 21 0 0 0 chr17 18661019 18661040 -76611611 + AT_rich Low_complexity Low_complexity 1 21 0 2 727 2454 158 0 7 chr17 18661058 18661465 -76611186 + RLTR9E LTR ERVK 6 409 0 2 727 659 133 0 0 chr17 18661469 18661574 -76611077 + MusHAL1 LINE L1 1464 1568 -1144 2 727 2389 255 41 2 chr17 18661571 18662137 -76610514 + Lx2B LINE L1 6332 6919 -81 2 727 1689 104 8 4 chr17 18662173 18662424 -76610227 + L1_Mus1 LINE L1 6315 6566 -1 2 727 320 182 0 0 chr17 18662437 18662492 -76610159 + ORR1A2 LTR MaLR 292 346 0 2 727 2504 216 28 9 chr17 18662496 18662803 -76609848 + ORR1A2-int LTR MaLR 5 312 -1651 2 727 432 0 0 0 chr17 18662803 18662851 -76609800 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 727 3267 230 42 39 chr17 18662851 18663994 -76608657 + ORR1A2-int LTR MaLR 313 1963 0 2 727 349 272 0 0 chr17 18663995 18664087 -76608564 + ORR1A2 LTR MaLR 2 93 -234 2 727 3164 178 50 9 chr17 18664098 18664828 -76607823 - Lx LINE L1 -1 6565 5776 2 727 1050 228 182 81 chr17 18664831 18665188 -76607463 + RLTR9C LTR ERVK 1 393 0 2 727 352 216 18 64 chr17 18665189 18665298 -76607353 + ETnERV2-int LTR ERVK 1 104 -4740 2 727 3921 185 32 104 chr17 18665333 18666471 -76606180 + ETnERV2-int LTR ERVK 108 1163 -3681 2 727 2209 176 79 24 chr17 18666502 18666968 -76605683 + ETnERV2-int LTR ERVK 2506 2997 -4409 2 727 873 186 0 17 chr17 18666968 18667148 -76605503 + RLTR13D1 LTR ERVK 486 662 -144 2 727 4007 173 32 17 chr17 18667690 18668656 -76603995 + ETnERV2-int LTR ERVK 2397 4088 -3318 2 727 29921 98 17 12 chr17 18668658 18673687 -76598964 + L1Md_F2 LINE L1 531 5585 -298 2 727 7137 76 6 39 chr17 18673688 18674710 -76597941 + L1Md_F2 LINE L1 5587 6574 -8 2 727 3222 193 23 59 chr17 18674770 18675841 -76596810 + MMETn-int LTR ERVK 2433 3745 -1099 2 727 303 75 0 0 chr17 18676057 18676097 -76596554 + MMETn-int LTR ERVK 7331 7370 -36 2 727 926 225 78 102 chr17 18676098 18676478 -76596173 + RLTR9C LTR ERVK 33 403 0 2 727 3130 219 8 1 chr17 18676483 18677133 -76595518 - Lx LINE L1 -110 5773 5120 2 727 711 215 47 167 chr17 18677135 18677422 -76595229 + ORR1A2 LTR MaLR 86 327 0 2 727 4404 270 44 15 chr17 18677422 18679188 -76593463 + L1_Mur2 LINE L1 3379 5194 -683 2 727 3026 239 13 10 chr17 18679233 18679933 -76592718 - Lx4A LINE L1 -7 7051 6350 2 727 4670 194 69 18 chr17 18679955 18680525 -76592126 + L1_Mur2 LINE L1 1465 2081 -3796 2 727 444 19 0 0 chr17 18680525 18680578 -76592073 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 727 4670 194 69 18 chr17 18680578 18681301 -76591350 + L1_Mur2 LINE L1 2082 2824 -3053 2 727 1052 198 41 18 chr17 18681323 18681544 -76591107 + RLTR17 LTR ERVK 1 226 -466 2 727 1578 234 11 0 chr17 18681571 18681935 -76590716 - L1_Mm LINE L1 -226 5657 5290 2 727 200 195 0 0 chr17 18682218 18682259 -76590392 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 727 6849 88 43 3 chr17 18682558 18684036 -76588615 - L1Md_F2 LINE L1 -4 6578 5025 2 727 409 255 27 20 chr17 18684883 18685031 -76587620 + MYSERV6-int LTR ERVK 1599 1747 -7212 2 727 17103 28 0 0 chr17 18685031 18687708 -76584943 - L1Md_T LINE L1 0 6582 3906 2 727 1101 307 21 3 chr17 18687948 18688275 -76584376 + ORR1A1 LTR MaLR 6 338 -8 2 727 1161 329 70 53 chr17 18688659 18689953 -76582698 + MYSERV6-int LTR ERVK 1591 2906 -6053 2 727 680 327 11 0 chr17 18689947 18690213 -76582438 + MurERV4-int LTR ERVK 4673 4941 -319 2 727 2890 38 3 0 chr17 18690216 18690561 -76582090 - ORR1A0 LTR MaLR 0 346 1 2 727 2838 119 29 11 chr17 18690938 18691388 -76581263 - L1_Mus2 LINE L1 0 6566 6109 2 727 397 343 77 54 chr17 18691659 18691918 -76580733 + MurERV4-int LTR ERVK 4842 5106 -1444 2 727 470 286 129 21 chr17 18691922 18692115 -76580536 + RMER4A LTR ERVK 242 455 -11 2 727 294 50 0 0 chr17 18692317 18692357 -76580294 + (T)n Simple_repeat Simple_repeat 1 40 0 2 727 809 236 169 52 chr17 18692646 18693012 -76579639 + RLTR9E LTR ERVK 1 409 0 2 727 8675 195 29 16 chr17 18693013 18695165 -76577486 + ETnERV2-int LTR ERVK 2 2124 -4043 2 727 2655 61 6 3 chr17 18695176 18695520 -76577131 + IAPLTR4 LTR ERVK 1 345 0 2 727 25417 236 20 15 chr17 18695520 18703189 -76569462 + IAPLTR3-int LTR ERVK 1 7329 -351 2 727 2680 61 3 3 chr17 18703189 18703534 -76569117 + IAPLTR4 LTR ERVK 1 345 0 2 727 20888 178 15 20 chr17 18703629 18707785 -76564866 + ETnERV2-int LTR ERVK 2227 7143 -263 2 727 586 242 224 38 chr17 18707785 18708152 -76564499 + RLTR13D6 LTR ERVK 92 537 -365 2 727 371 111 39 77 chr17 18708152 18708230 -76564421 + ETnERV2-int LTR ERVK 7329 7403 -3 2 727 732 243 179 56 chr17 18708232 18708590 -76564061 + RLTR9E LTR ERVK 1 402 -7 2 727 904 296 69 24 chr17 18708964 18709473 -76563178 + MYSERV6-int LTR ERVK 8162 8693 -266 2 727 374 206 74 9 chr17 18709619 18709727 -76562924 + MYSERV-int LTR ERVK 6369 6483 -67 2 727 180 0 0 0 chr17 18711195 18711215 -76561436 + (T)n Simple_repeat Simple_repeat 1 20 0 2 727 1044 116 0 0 chr17 18711215 18711362 -76561289 - B1_Mm SINE Alu 0 147 1 2 727 216 0 0 0 chr17 18713069 18713093 -76559558 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 727 231 61 0 0 chr17 18713118 18713151 -76559500 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 2 727 227 315 0 0 chr17 18713151 18713240 -76559411 + (TG)n Simple_repeat Simple_repeat 1 89 0 2 727 298 236 56 9 chr17 18713270 18713377 -76559274 + Lx9 LINE L1 7523 7634 -10 2 727 22 80 0 0 chr17 18713378 18713428 -76559223 + AT_rich Low_complexity Low_complexity 1 50 0 2 727 1462 161 65 24 chr17 18714214 18714507 -76558144 + RLTR22_Mur LTR ERVK 314 618 -1230 2 727 1063 160 16 0 chr17 18714652 18714840 -76557811 + RLTR22_Mur LTR ERVK 635 825 -1023 2 727 180 0 0 0 chr17 18714849 18714869 -76557782 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 2 727 253 82 41 0 chr17 18714882 18714931 -76557720 + (TTTTG)n Simple_repeat Simple_repeat 1 51 0 2 727 216 0 0 0 chr17 18714965 18714989 -76557662 + (T)n Simple_repeat Simple_repeat 1 24 0 2 727 495 0 0 0 chr17 18716592 18716647 -76556004 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 727 567 78 0 0 chr17 18717892 18717969 -76554682 + (TA)n Simple_repeat Simple_repeat 2 78 0 2 727 22 56 0 0 chr17 18718277 18718313 -76554338 + AT_rich Low_complexity Low_complexity 1 36 0 2 727 394 414 29 51 chr17 18721316 18721690 -76550961 - ORR1D2 LTR MaLR -2 368 3 2 727 3640 212 20 16 chr17 18722305 18723167 -76549484 - Lx2 LINE L1 -1 6996 6132 2 727 198 0 0 0 chr17 18724265 18724287 -76548364 + (T)n Simple_repeat Simple_repeat 1 22 0 2 727 22 35 0 0 chr17 18724389 18724418 -76548233 + AT_rich Low_complexity Low_complexity 1 29 0 2 727 228 268 24 12 chr17 18724532 18724615 -76548036 - Lx3C LINE L1 -3 6973 6890 2 727 1416 222 72 8 chr17 18724604 18725056 -76547595 - Lx2 LINE L1 -992 5984 5516 2 727 10248 159 41 34 chr17 18725059 18727344 -76545307 - L1_Mus3 LINE L1 -532 6106 3785 2 727 888 196 91 5 chr17 18727311 18727532 -76545119 - L1_Mur1 LINE L1 -336 5550 5311 2 727 409 257 9 0 chr17 18727528 18727641 -76545010 - L1_Mur1 LINE L1 -892 4994 4881 2 727 780 91 0 0 chr17 18727647 18727757 -76544894 + (TTCC)n Simple_repeat Simple_repeat 2 111 0 2 727 372 94 0 0 chr17 18727757 18727810 -76544841 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 727 922 114 15 0 chr17 18727856 18727987 -76544664 + B1_Mm SINE Alu 2 134 -13 2 727 328 147 27 0 chr17 18727990 18728065 -76544586 + (TA)n Simple_repeat Simple_repeat 2 78 0 2 727 433 256 0 168 chr17 18728065 18728188 -76544463 - L1_Mur1 LINE L1 -1064 4813 4724 2 727 228 35 0 0 chr17 18728188 18728217 -76544434 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 727 433 256 0 168 chr17 18728217 18728295 -76544356 - L1_Mur1 LINE L1 -1154 4723 4646 2 727 911 151 0 0 chr17 18728298 18728444 -76544207 + B1_Mus2 SINE Alu 1 146 -1 2 727 437 100 36 18 chr17 18728444 18728556 -76544095 + (CAAA)n Simple_repeat Simple_repeat 1 114 0 2 727 3669 212 23 1 chr17 18728595 18729459 -76543192 - L1_Mur1 LINE L1 -1222 4664 3782 2 727 1237 236 44 22 chr17 18729455 18729862 -76542789 + L1_Mur2 LINE L1 4210 4625 -1252 2 727 21 0 0 0 chr17 18729989 18730010 -76542641 + AT_rich Low_complexity Low_complexity 1 21 0 2 727 991 114 7 0 chr17 18730043 18730183 -76542468 + B1_Mus2 SINE Alu 1 141 -6 2 727 189 0 0 0 chr17 18730187 18730208 -76542443 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2 727 21 0 0 0 chr17 18730348 18730369 -76542282 + AT_rich Low_complexity Low_complexity 1 21 0 2 727 1384 229 10 3 chr17 18730463 18730766 -76541885 - ORR1A3 LTR MaLR -13 314 10 2 727 2423 251 42 14 chr17 18730774 18731421 -76541230 - ORR1A3-int LTR MaLR 0 1963 1299 2 727 489 34 0 0 chr17 18731423 18731482 -76541169 + (T)n Simple_repeat Simple_repeat 1 59 0 2 727 4009 228 60 111 chr17 18731482 18732855 -76539796 - ORR1A3-int LTR MaLR -659 1304 2 2 727 1396 231 18 18 chr17 18732856 18733182 -76539469 - ORR1A3 LTR MaLR 0 326 1 2 727 22 35 0 0 chr17 18735277 18735306 -76537345 + AT_rich Low_complexity Low_complexity 1 29 0 2 727 21 71 0 0 chr17 18735508 18735550 -76537101 + AT_rich Low_complexity Low_complexity 1 42 0 2 727 24 32 0 0 chr17 18735566 18735597 -76537054 + AT_rich Low_complexity Low_complexity 1 31 0 2 727 23 33 0 0 chr17 18735656 18735686 -76536965 + AT_rich Low_complexity Low_complexity 1 30 0 2 727 27 0 0 0 chr17 18735883 18735910 -76536741 + AT_rich Low_complexity Low_complexity 1 27 0 2 727 221 75 25 0 chr17 18737009 18737049 -76535602 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 2 727 22 0 0 0 chr17 18737419 18737441 -76535210 + AT_rich Low_complexity Low_complexity 1 22 0 2 727 448 347 67 9 chr17 18737441 18737665 -76534986 - Lx3C LINE L1 -11 6965 6729 2 727 295 318 70 32 chr17 18737636 18737792 -76534859 - Lx4B LINE L1 -517 6541 6356 2 727 1632 234 94 19 chr17 18738075 18738502 -76534149 - Lx4A LINE L1 -502 6556 6098 2 90 37964 31 0 0 chr17 18738616 18745046 -76527605 - L1Md_T LINE L1 0 6585 59 2 728 1860 219 98 6 chr17 18745101 18745593 -76527058 + Lx4A LINE L1 6520 7056 -2 2 728 193 122 19 58 chr17 18745594 18745646 -76527005 + A-rich Low_complexity Low_complexity 1 50 0 2 728 423 343 68 45 chr17 18745823 18746263 -76526388 + Lx9 LINE L1 6912 7361 -283 2 728 2688 223 49 24 chr17 18746583 18747323 -76525328 - L1_Mur2 LINE L1 -499 5378 4621 2 728 1248 266 6 18 chr17 18747352 18747678 -76524973 + Lx4A LINE L1 6129 6450 -608 2 728 3967 108 80 57 chr17 18747678 18748412 -76524239 - RMER17A LTR ERVK 0 751 1 2 728 7381 80 26 7 chr17 18748413 18749771 -76522880 - RMER17A-int LTR ERVK -1 1727 1 2 728 4288 115 12 94 chr17 18749771 18750589 -76522062 - RMER17A LTR ERVK 0 751 1 2 728 2282 238 44 2 chr17 18750590 18751130 -76521521 + Lx4A LINE L1 6446 7008 -50 2 728 373 188 30 50 chr17 18751233 18751334 -76521317 + RLTR21 LTR ERVK 1172 1270 -302 2 728 288 297 0 10 chr17 18751357 18751496 -76521155 + CT-rich Low_complexity Low_complexity 1 137 0 2 728 303 325 23 38 chr17 18752670 18752932 -76519719 + RNERVK23-int LTR ERVK 181 438 -6806 2 728 189 286 15 45 chr17 18753997 18754063 -76518588 + L3 LINE CR1 3460 3523 -966 2 728 3231 324 87 75 chr17 18754382 18756632 -76516019 + RNERVK23-int LTR ERVK 1430 4120 -4097 2 728 195 42 0 0 chr17 18756632 18756656 -76515995 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2 728 1017 104 0 0 chr17 18756656 18756791 -76515860 - B1_Mus1 SINE Alu -13 135 1 2 728 3231 325 63 52 chr17 18756791 18758482 -76514169 + RNERVK23-int LTR ERVK 4121 5836 -2381 2 728 360 328 21 26 chr17 18758702 18758896 -76513755 + RNERVK23-int LTR ERVK 6147 6339 -1878 2 728 265 270 49 20 chr17 18759324 18759426 -76513225 + RNERVK23-int LTR ERVK 6784 6888 -1329 2 728 1422 302 16 9 chr17 18759773 18760349 -76512302 + RNERVK23-int LTR ERVK 7241 7762 -455 2 728 624 177 24 0 chr17 18761579 18761743 -76510908 + T-rich Low_complexity Low_complexity 3 170 0 2 728 333 267 0 11 chr17 18761743 18761834 -76510817 + CT-rich Low_complexity Low_complexity 4 93 0 2 728 304 268 103 24 chr17 18761837 18761963 -76510688 - RMER15 LTR ERVL -103 472 337 3 728 26 30 0 0 chr17 18762059 18762092 -76510559 + AT_rich Low_complexity Low_complexity 1 33 0 3 728 233 230 52 39 chr17 18762092 18762169 -76510482 - RMER15 LTR ERVL -472 103 26 3 728 1048 257 75 44 chr17 18762557 18762729 -76509922 - RMER1A Other Other -4 1062 815 3 728 1400 181 102 38 chr17 18762729 18763073 -76509578 - RLTR9A LTR ERVK 0 368 3 3 728 1181 314 110 38 chr17 18763073 18763571 -76509080 - RMER1B Other Other -216 814 17 3 728 331 380 8 0 chr17 18763674 18763803 -76508848 - RMER1A Other Other -890 140 11 3 728 339 364 24 34 chr17 18763979 18764184 -76508467 - Lx5 LINE L1 -17 7033 6831 3 728 288 263 64 28 chr17 18765638 18765779 -76506872 + L1M2 LINE L1 5125 5270 -873 3 728 272 317 73 48 chr17 18766061 18766319 -76506332 + Lx8 LINE L1 5527 5799 -1674 3 728 275 0 0 28 chr17 18766587 18766623 -76506028 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 3 728 311 0 0 25 chr17 18766701 18766741 -76505910 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 728 209 213 0 0 chr17 18766747 18766794 -76505857 + A-rich Low_complexity Low_complexity 1 47 0 3 728 437 186 0 0 chr17 18766820 18766906 -76505745 + Lx4B LINE L1 5705 5790 -87 3 728 3486 170 14 3 chr17 18766897 18767858 -76504793 + Lx3_Mus LINE L1 5291 6260 -749 3 728 3231 172 21 34 chr17 18767850 18768476 -76504175 + Lx3_Mus LINE L1 6392 7009 0 3 728 2752 260 14 30 chr17 18768491 18769283 -76503368 + Lx4B LINE L1 5784 6562 -496 3 728 3273 272 69 64 chr17 18769320 18771184 -76501467 + L1_Mur2 LINE L1 1341 3213 -2664 3 728 1618 184 7 0 chr17 18771352 18771634 -76501017 + ORR1A2 LTR MaLR 3 286 -41 3 728 310 164 49 0 chr17 18771634 18771695 -76500956 - Lx2A LINE L1 -1102 5906 5843 3 728 1389 203 59 0 chr17 18771698 18772003 -76500648 + ORR1A2 LTR MaLR 5 327 0 3 728 3407 249 28 91 chr17 18772003 18773175 -76499476 + ORR1A2-int LTR MaLR 1 1098 -694 3 728 6374 102 13 8 chr17 18773175 18774121 -76498530 + L1_Mus2 LINE L1 5622 6654 0 3 728 2178 235 19 13 chr17 18774139 18774665 -76497986 - Lx4A LINE L1 -198 6860 6332 3 728 4770 206 56 17 chr17 18774662 18775237 -76497414 + L1_Mur2 LINE L1 1459 2056 -3821 3 728 555 85 0 0 chr17 18775237 18775319 -76497332 + (CA)n Simple_repeat Simple_repeat 1 82 0 3 728 4770 206 56 17 chr17 18775319 18776062 -76496589 + L1_Mur2 LINE L1 2057 2828 -3049 3 728 431 199 161 20 chr17 18776052 18776201 -76496450 + L1_Mur2 LINE L1 5178 5347 -530 3 728 264 130 0 0 chr17 18776657 18776703 -76495948 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 728 21 23 0 64 chr17 18776720 18776767 -76495884 + AT_rich Low_complexity Low_complexity 1 44 0 3 728 5134 161 40 2 chr17 18777875 18778810 -76493841 - Lx3_Mus LINE L1 -1 7008 6039 3 728 342 284 31 35 chr17 18778843 18779032 -76493619 + MYSERV6-int LTR ERVK 1639 1791 -7168 3 728 263 203 176 0 chr17 18779202 18779276 -76493375 + ORR1A2 LTR MaLR 6 92 -275 3 728 1117 318 82 25 chr17 18779366 18780123 -76492528 + MurERV4-int LTR ERVK 2649 3448 -1812 3 728 686 283 11 23 chr17 18780128 18780388 -76492263 + MurERV4-int LTR ERVK 4121 4377 -4582 3 728 2865 63 24 0 chr17 18780390 18780769 -76491882 - MTA_Mm LTR MaLR -8 388 1 3 728 8363 64 9 3 chr17 18780769 18781860 -76490791 - MTA_Mm-int LTR MaLR 0 1098 1 3 728 3144 71 0 0 chr17 18781860 18782256 -76490395 - MTA_Mm LTR MaLR 0 396 1 3 728 456 286 111 18 chr17 18782941 18783112 -76489539 + RMER4A LTR ERVK 253 439 -27 3 728 248 0 0 30 chr17 18783411 18783444 -76489207 + (TAA)n Simple_repeat Simple_repeat 2 33 0 3 728 5558 142 22 1 chr17 18783705 18784615 -76488036 + L1_Mus3 LINE L1 5705 6633 -5 3 728 540 332 30 19 chr17 18784694 18785237 -76487414 + MYSERV6-int LTR ERVK 8093 8513 -446 3 728 541 276 47 8 chr17 18785249 18785377 -76487274 + ETnERV2-int LTR ERVK 7070 7202 -204 3 728 1123 227 51 48 chr17 18786296 18786588 -76486063 + RMER16-int LTR ERVK 241 533 -4873 3 728 427 83 0 0 chr17 18786561 18786621 -76486030 + RLTR45-int LTR ERVK 5750 5809 -1435 3 728 3231 168 26 4 chr17 18786664 18787463 -76485188 - Lx2A LINE L1 -884 6124 5285 3 728 289 72 83 12 chr17 18787463 18787547 -76485104 + (TA)n Simple_repeat Simple_repeat 2 91 0 3 728 274 260 13 26 chr17 18787549 18787703 -76484948 + L1_Mur3 LINE L1 5213 5364 -516 3 728 22 0 0 0 chr17 18788165 18788187 -76484464 + AT_rich Low_complexity Low_complexity 1 22 0 3 728 915 175 3 11 chr17 18788823 18789009 -76483642 - L1_Mus4 LINE L1 -1704 5769 5594 3 728 3069 147 18 5 chr17 18788984 18789540 -76483111 + MusHAL1 LINE L1 1865 2427 -285 3 728 2598 258 66 23 chr17 18790035 18790856 -76481795 + Lx4B LINE L1 5783 6638 -420 3 728 3935 48 6 14 chr17 18791056 18791558 -76481093 + L1Md_F2 LINE L1 6077 6574 -8 3 728 857 269 45 35 chr17 18791566 18792101 -76480550 + L1_Mur2 LINE L1 1278 1817 -4063 3 728 21 0 0 0 chr17 18792101 18792122 -76480529 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 26650 121 30 4 chr17 18792122 18793411 -76479240 - L1_Mus2 LINE L1 0 6657 5239 3 728 306 0 0 0 chr17 18793411 18793445 -76479206 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 728 26650 142 22 3 chr17 18793445 18796548 -76476103 - L1_Mus2 LINE L1 -648 5238 2075 3 728 275 0 0 28 chr17 18796548 18796584 -76476067 + (TTG)n Simple_repeat Simple_repeat 2 36 0 3 728 26650 171 16 37 chr17 18796584 18797967 -76474684 - L1_Mus2 LINE L1 -3812 2074 637 3 728 306 274 43 29 chr17 18797985 18798124 -76474527 - L1_Mus2 LINE L1 -5801 818 678 3 728 423 297 118 34 chr17 18798243 18798496 -76474155 - L1VL1 LINE L1 -6048 370 79 3 728 1269 284 18 55 chr17 18798513 18799135 -76473516 + L1_Mur2 LINE L1 1848 2446 -3431 3 728 4035 223 10 9 chr17 18799133 18800157 -76472494 - L1_Mur2 LINE L1 -493 5384 4360 3 728 2357 287 54 81 chr17 18800154 18801204 -76471447 + Lx2 LINE L1 5895 6916 -81 3 728 1648 130 0 0 chr17 18801244 18801498 -76471153 + L1_Mus1 LINE L1 6314 6567 0 3 728 312 182 0 0 chr17 18801510 18801565 -76471086 + ORR1A2 LTR MaLR 272 326 0 3 728 3404 235 58 34 chr17 18801569 18803036 -76469615 + ORR1A2-int LTR MaLR 5 1963 0 3 728 319 290 0 0 chr17 18803036 18803129 -76469522 + ORR1A2 LTR MaLR 1 93 -233 3 728 4250 190 30 14 chr17 18803138 18804568 -76468083 - Lx LINE L1 -1 6565 5099 3 728 891 215 44 124 chr17 18804569 18804819 -76467832 + ORR1A2 LTR MaLR 96 325 -2 3 728 4519 261 54 14 chr17 18804821 18806567 -76466084 + L1_Mur2 LINE L1 3379 5193 -684 3 728 2714 253 15 32 chr17 18806611 18807325 -76465326 - Lx4A LINE L1 -7 7051 6350 3 728 4386 196 65 36 chr17 18807345 18807944 -76464707 + L1_Mur2 LINE L1 1463 2063 -3814 3 728 213 108 0 0 chr17 18807944 18807981 -76464670 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 728 4386 196 65 36 chr17 18807981 18808705 -76463946 + L1_Mur2 LINE L1 2064 2824 -3053 3 728 2603 207 48 11 chr17 18808727 18809293 -76463358 + RLTR17 LTR ERVK 1 587 -105 3 728 290 259 155 2 chr17 18809380 18809514 -76463137 + L1_Mur2 LINE L1 5197 5344 -533 3 728 5196 188 13 2 chr17 18809817 18811023 -76461628 - Lx2A LINE L1 -498 6510 5290 3 728 585 52 0 0 chr17 18811300 18811377 -76461274 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 728 21 0 0 0 chr17 18811664 18811685 -76460966 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 7131 95 3 1 chr17 18811710 18813273 -76459378 - L1Md_F2 LINE L1 0 6582 5020 3 728 21 0 0 0 chr17 18813803 18813824 -76458827 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 726 274 26 11 chr17 18814019 18814285 -76458366 + MYSERV6-int LTR ERVK 4120 4389 -4570 3 728 2841 133 2 19 chr17 18814658 18815124 -76457527 - L1_Mus2 LINE L1 0 6566 6109 3 728 387 336 66 59 chr17 18815398 18815670 -76456981 + MYSERV6-int LTR ERVK 4842 5115 -1435 3 728 226 242 91 0 chr17 18815670 18815736 -76456915 + RMER4B LTR ERVK 252 323 -143 3 728 241 237 130 30 chr17 18815737 18815837 -76456814 + RMER4B LTR ERVK 448 557 -28 3 728 7315 52 68 3 chr17 18815857 18816923 -76455728 - L1Md_F2 LINE L1 -1 6581 5455 3 728 23 0 0 0 chr17 18817017 18817040 -76455611 + AT_rich Low_complexity Low_complexity 1 23 0 3 728 937 284 64 39 chr17 18817762 18818286 -76454365 + MYSERV6-int LTR ERVK 8265 8693 -266 3 728 413 187 74 9 chr17 18818430 18818538 -76454113 + MYSERV6-int LTR ERVK 6369 6483 -67 3 728 367 0 15 60 chr17 18819996 18820063 -76452588 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 3 728 1051 88 0 0 chr17 18820063 18820200 -76452451 - B1_Mm SINE Alu -10 137 1 3 728 183 42 0 0 chr17 18821914 18821938 -76450713 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 728 317 234 56 9 chr17 18822015 18822123 -76450528 + Lx9 LINE L1 7522 7634 -10 3 728 22 80 0 0 chr17 18822124 18822174 -76450477 + AT_rich Low_complexity Low_complexity 1 50 0 3 728 24 77 0 0 chr17 18822327 18822379 -76450272 + AT_rich Low_complexity Low_complexity 1 52 0 3 728 31 92 0 0 chr17 18822488 18822575 -76450076 + AT_rich Low_complexity Low_complexity 1 87 0 3 728 277 355 80 9 chr17 18822751 18822941 -76449710 - B3A SINE B2 -5 211 7 3 728 1773 158 3 27 chr17 18822952 18823290 -76449361 + RLTR22_Mur LTR ERVK 306 635 -1213 3 728 602 185 8 0 chr17 18823434 18823553 -76449098 + RLTR22_Mur LTR ERVK 635 754 -1094 3 728 315 0 0 0 chr17 18823581 18823616 -76449035 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3 728 272 177 63 0 chr17 18823616 18823695 -76448956 + T-rich Low_complexity Low_complexity 4 87 0 3 728 318 151 0 0 chr17 18823734 18823807 -76448844 + T-rich Low_complexity Low_complexity 1 73 0 3 728 1991 62 0 0 chr17 18824680 18824936 -76447715 - L1Md_A LINE L1 0 6582 6327 3 728 21 0 0 0 chr17 18825340 18825361 -76447290 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 843 279 153 6 chr17 18827069 18827408 -76445243 + ORR1B1 LTR MaLR 5 393 -1 3 728 230 235 0 29 chr17 18827456 18827526 -76445125 + (TTTA)n Simple_repeat Simple_repeat 1 68 0 3 728 2306 295 59 44 chr17 18827526 18828858 -76443793 + ORR1B1-int LTR MaLR 54 1509 0 3 728 1062 303 23 38 chr17 18828858 18829256 -76443395 + ORR1B1 LTR MaLR 1 392 -2 3 728 317 311 82 25 chr17 18829841 18829963 -76442688 + B1_Mm SINE Alu 18 146 -1 3 728 312 91 0 0 chr17 18830015 18830059 -76442592 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 728 22 35 0 0 chr17 18832699 18832728 -76439923 + AT_rich Low_complexity Low_complexity 1 29 0 3 728 415 417 21 50 chr17 18833289 18833668 -76438983 - ORR1D2 LTR MaLR -2 368 1 3 728 3946 198 16 14 chr17 18834279 18835116 -76437535 - Lx2 LINE L1 -1 6996 6159 3 728 21 0 0 0 chr17 18835149 18835170 -76437481 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 24 32 0 0 chr17 18836345 18836376 -76436275 + AT_rich Low_complexity Low_complexity 1 31 0 3 728 1469 220 71 14 chr17 18836562 18837024 -76435627 - Lx2 LINE L1 -989 5984 5517 3 728 4988 157 49 2 chr17 18837028 18838245 -76434406 - L1_Mus3 LINE L1 -532 6106 4829 3 728 2288 147 50 7 chr17 18838239 18838657 -76433994 - L1_Mus3 LINE L1 -1659 4224 3789 3 728 857 200 90 9 chr17 18838629 18838851 -76433800 - L1_Mur1 LINE L1 -336 5550 5311 3 728 755 248 20 35 chr17 18838843 18838977 -76433674 - L1_Mur1 LINE L1 -888 4998 4861 3 728 915 97 25 13 chr17 18838977 18839134 -76433517 + (TTTC)n Simple_repeat Simple_repeat 3 161 0 3 728 755 248 20 35 chr17 18839134 18839174 -76433477 - L1_Mur1 LINE L1 -1026 4860 4823 3 728 763 139 90 0 chr17 18839174 18839296 -76433355 + B1_Mm SINE Alu 2 134 -13 3 728 711 0 0 0 chr17 18839299 18839378 -76433273 + (TA)n Simple_repeat Simple_repeat 2 80 0 3 728 755 248 20 35 chr17 18839378 18839453 -76433198 - L1_Mur1 LINE L1 -1064 4822 4750 3 728 222 105 0 0 chr17 18839456 18839494 -76433157 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 3 728 232 218 0 103 chr17 18839521 18839608 -76433043 - L1_Mur1 LINE L1 -1154 4723 4646 3 728 397 67 17 0 chr17 18839615 18839675 -76432976 + B1_Mus1 SINE Alu 5 65 -83 3 728 681 225 112 0 chr17 18839650 18839810 -76432841 - ORR1A3 LTR MaLR -139 187 10 3 728 5190 241 57 90 chr17 18839818 18841847 -76430804 - ORR1A3-int LTR MaLR 0 1963 2 3 728 1520 217 19 19 chr17 18841848 18842172 -76430479 - ORR1A3 LTR MaLR 0 326 3 3 728 21 0 0 0 chr17 18842179 18842200 -76430451 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 21 0 0 0 chr17 18842227 18842248 -76430403 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 23 33 0 0 chr17 18844278 18844308 -76428343 + AT_rich Low_complexity Low_complexity 1 30 0 4 728 23 54 0 0 chr17 18844629 18844666 -76427985 + AT_rich Low_complexity Low_complexity 1 37 0 4 728 33 25 0 0 chr17 18844863 18844903 -76427748 + AT_rich Low_complexity Low_complexity 1 40 0 4 728 377 333 80 18 chr17 18846387 18846613 -76426038 - Lx3C LINE L1 -4 6972 6733 4 728 307 291 45 16 chr17 18846587 18846745 -76425906 - Lx3C LINE L1 -432 6544 6382 4 728 994 222 102 15 chr17 18847020 18847484 -76425167 - Lx4A LINE L1 -502 6556 6053 4 728 1987 199 102 8 chr17 18847486 18847977 -76424674 + Lx4A LINE L1 6520 7056 -2 4 728 329 349 128 20 chr17 18848204 18848610 -76424041 + Lx9 LINE L1 6912 7361 -283 4 728 2841 219 40 25 chr17 18848927 18849673 -76422978 - L1_Mur2 LINE L1 -499 5378 4622 4 728 5999 72 19 31 chr17 18849673 18850505 -76422146 - RLTR13B2 LTR ERVK 0 822 1 4 728 1201 289 0 0 chr17 18850545 18850863 -76421788 + Lx4A LINE L1 6133 6450 -608 4 728 4455 112 15 62 chr17 18850863 18851651 -76421000 - RMER17A LTR ERVK 0 751 1 4 728 7000 86 50 4 chr17 18851652 18852987 -76419664 - RMER17A-int LTR ERVK -1 1727 1 4 728 4342 127 12 45 chr17 18852987 18853764 -76418887 - RMER17A LTR ERVK 0 751 1 4 728 2194 241 50 2 chr17 18853765 18854301 -76418350 + Lx4A LINE L1 6446 7007 -51 4 728 374 161 0 22 chr17 18854387 18854476 -76418175 + (TATG)n Simple_repeat Simple_repeat 2 88 0 4 728 186 43 0 0 chr17 18854555 18854578 -76418073 + (TC)n Simple_repeat Simple_repeat 2 24 0 4 728 22 56 0 0 chr17 18854776 18854812 -76417839 + AT_rich Low_complexity Low_complexity 1 36 0 4 728 292 349 17 17 chr17 18857374 18857549 -76415102 + RNERVK23-int LTR ERVK 1652 1826 -6391 4 728 250 143 0 0 chr17 18857712 18857754 -76414897 + SRV_MM-int LTR ERVK 1611 1652 -4515 4 728 195 42 0 0 chr17 18858001 18858025 -76414626 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 4 728 900 136 0 0 chr17 18858026 18858158 -76414493 - B1_Mm SINE Alu -2 145 14 4 728 300 311 28 70 chr17 18858069 18858211 -76414440 - MT2B LTR ERVL -344 257 122 4 728 1350 313 108 69 chr17 18858217 18860262 -76412389 + RNERVK23-int LTR ERVK 4209 6331 -1886 4 728 1108 268 0 0 chr17 18861132 18861397 -76411254 + RNERVK23-int LTR ERVK 7462 7726 -491 4 728 780 158 0 17 chr17 18862698 18862872 -76409779 + T-rich Low_complexity Low_complexity 3 173 0 4 728 505 51 51 0 chr17 18862947 18863026 -76409625 + (TTTC)n Simple_repeat Simple_repeat 3 85 0 4 728 394 244 100 23 chr17 18863028 18863158 -76409493 - RMER15 LTR ERVL -99 476 337 4 728 261 0 0 0 chr17 18863255 18863284 -76409367 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 728 1559 316 76 30 chr17 18863676 18863850 -76408801 - RMER1B Other Other -4 1062 877 4 728 1637 171 39 25 chr17 18863850 18864209 -76408442 - RLTR9A LTR ERVK 0 368 5 4 728 1559 328 83 30 chr17 18864209 18864982 -76407669 - RMER1B Other Other -190 876 35 4 728 334 317 47 38 chr17 18866945 18867181 -76405470 + L1M4 LINE L1 5258 5495 -679 4 728 347 314 59 45 chr17 18867247 18867467 -76405184 + L1_Mur2 LINE L1 5527 5749 -131 4 728 209 83 0 27 chr17 18867775 18867812 -76404839 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 4 728 318 26 0 0 chr17 18867887 18867926 -76404725 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 728 401 259 0 3 chr17 18867947 18868061 -76404590 + L1_Mur2 LINE L1 5689 5821 -523 4 728 6954 139 9 99 chr17 18868055 18868526 -76404125 + Lx3_Mus LINE L1 5292 5708 -178 4 728 8162 42 2 0 chr17 18868526 18869520 -76403131 + L1Md_F2 LINE L1 5587 6582 0 4 728 6954 165 40 55 chr17 18869520 18870787 -76401864 + Lx3_Mus LINE L1 5706 7009 0 4 728 2638 263 17 23 chr17 18870805 18871587 -76401064 + Lx4B LINE L1 5786 6562 -496 4 728 3565 273 86 41 chr17 18871594 18872320 -76400331 + L1_Mur2 LINE L1 1311 2054 -3823 4 728 261 118 0 0 chr17 18872320 18872371 -76400280 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 728 3565 273 86 41 chr17 18872371 18873252 -76399399 + L1_Mur2 LINE L1 2055 2988 -2889 4 728 186 71 0 0 chr17 18873252 18873280 -76399371 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 4 728 279 54 0 0 chr17 18873283 18873320 -76399331 + (CAA)n Simple_repeat Simple_repeat 3 39 0 4 728 3565 273 86 41 chr17 18873320 18873678 -76398973 + L1_Mur2 LINE L1 2989 3366 -2511 4 728 1536 197 7 0 chr17 18873691 18873975 -76398676 + ORR1A2 LTR MaLR 1 286 -41 4 728 317 123 53 0 chr17 18873975 18874032 -76398619 - Lx2A LINE L1 -1102 5906 5847 4 728 1326 211 62 0 chr17 18874035 18874343 -76398308 + ORR1A2 LTR MaLR 1 327 0 4 11 1323 214 30 20 chr17 18874343 18874643 -76398008 + ORR1A2-int LTR MaLR 1 303 -1660 4 729 38136 11 0 7 chr17 18874643 18879993 -76392658 + L1Md_A LINE L1 278 5586 -297 4 729 8804 15 0 0 chr17 18879993 18880989 -76391662 + L1Md_A LINE L1 5587 6582 0 4 729 2694 243 118 19 chr17 18881053 18881578 -76391073 + ORR1A2-int LTR MaLR 256 875 -1088 4 729 3613 44 5 2 chr17 18881578 18882013 -76390638 - RLTR10C LTR ERVK 0 436 1 4 729 2694 243 118 19 chr17 18882013 18882409 -76390242 + ORR1A2-int LTR MaLR 876 1268 -695 4 729 6470 93 25 1 chr17 18882410 18883328 -76389323 + L1_Mus2 LINE L1 5626 6565 -1 4 729 2185 237 27 6 chr17 18883353 18883871 -76388780 - Lx4A LINE L1 -198 6860 6332 4 729 4775 210 42 26 chr17 18883868 18884448 -76388203 + L1_Mur2 LINE L1 1459 2061 -3816 4 729 474 18 0 0 chr17 18884448 18884503 -76388148 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 729 4775 210 42 26 chr17 18884503 18885253 -76387398 + L1_Mur2 LINE L1 2062 2810 -3067 4 729 459 207 8 32 chr17 18885292 18885417 -76387234 + L1_Mur2 LINE L1 5170 5291 -589 4 729 22 56 0 0 chr17 18885493 18885529 -76387122 + AT_rich Low_complexity Low_complexity 1 36 0 4 729 5129 171 21 1 chr17 18886374 18887311 -76385340 - Lx3_Mus LINE L1 -20 6989 6034 4 729 354 137 53 27 chr17 18887695 18887770 -76384881 + ORR1A2 LTR MaLR 35 111 -283 4 729 587 332 36 33 chr17 18887851 18888383 -76384268 + MurERV4-int LTR ERVK 2095 2959 -2301 4 729 561 269 53 0 chr17 18888413 18888621 -76384030 + MYSERV6-int LTR ERVK 2675 2893 -6066 4 729 684 279 25 8 chr17 18888630 18888865 -76383786 + MYSERV6-int LTR ERVK 4123 4361 -4598 4 729 392 261 175 19 chr17 18889563 18889723 -76382928 + RMER4A LTR ERVK 253 437 -29 4 729 288 0 0 0 chr17 18890028 18890060 -76382591 + (TAA)n Simple_repeat Simple_repeat 2 33 0 4 729 5835 130 13 5 chr17 18890321 18891254 -76381397 + L1_Mus3 LINE L1 5699 6638 0 4 729 876 313 30 49 chr17 18891327 18892085 -76380566 + MYSERV6-int LTR ERVK 8119 8711 -248 4 729 29 47 0 0 chr17 18892164 18892207 -76380444 + AT_rich Low_complexity Low_complexity 1 43 0 4 729 4493 122 14 4 chr17 18892223 18892917 -76379734 - L1_Mus2 LINE L1 -1 6565 5865 4 729 1234 207 17 38 chr17 18892922 18893268 -76379383 - L1_Mur1 LINE L1 -1733 4153 3815 4 729 810 218 34 10 chr17 18893291 18893499 -76379152 + L1_Mur2 LINE L1 4209 4421 -1456 4 729 3446 244 44 101 chr17 18893503 18894743 -76377908 - ORR1A2-int LTR MaLR -781 1182 13 4 729 1224 257 35 0 chr17 18894743 18895031 -76377620 - ORR1A2 LTR MaLR -29 298 1 4 729 826 196 14 1 chr17 18895857 18896018 -76376633 + Lx LINE L1 6160 6328 -254 4 729 3677 39 5 2 chr17 18896018 18896453 -76376198 + RLTR10C LTR ERVK 1 436 0 4 729 1419 62 0 0 chr17 18896453 18896631 -76376020 + RLTR10-int LTR ERVK 1 178 -7403 4 729 287 175 8 77 chr17 18896685 18896815 -76375836 + A-rich Low_complexity Low_complexity 2 122 0 4 729 1950 32 154 7 chr17 18896815 18897094 -76375557 + RLTR10-int LTR ERVK 566 885 -1102 4 729 1776 39 13 4 chr17 18897063 18897293 -76375358 + MMERVK10C-int LTR ERVK 3512 3743 -3838 4 729 8685 41 0 0 chr17 18897286 18898307 -76374344 + MMERVK10C-int LTR ERVK 4790 5810 -1771 4 729 7339 52 2 52 chr17 18898293 18899278 -76373373 + MMERVK10C-int LTR ERVK 6646 7581 0 4 729 3643 44 5 2 chr17 18899278 18899713 -76372938 + RLTR10C LTR ERVK 1 436 0 4 729 1416 224 3 0 chr17 18899752 18900065 -76372586 + Lx LINE L1 6341 6654 0 4 729 2429 134 5 30 chr17 18900357 18900548 -76372103 - BGLII LTR ERVK 0 421 235 4 729 8072 23 7 3 chr17 18900548 18901474 -76371177 - RLTR13B3 LTR ERVK 0 929 1 4 729 2429 134 5 30 chr17 18901474 18901714 -76370937 - BGLII LTR ERVK -187 234 1 4 729 323 214 0 14 chr17 18901773 18901844 -76370807 + ORR1A2 LTR MaLR 26 95 -232 4 729 913 223 98 12 chr17 18901835 18901866 -76370785 + RLTR17 LTR ERVK 343 385 -307 4 729 564 81 0 0 chr17 18901866 18901953 -76370698 + (TG)n Simple_repeat Simple_repeat 2 88 0 4 729 913 226 101 13 chr17 18901953 18902226 -76370425 + RLTR17 LTR ERVK 386 618 -74 4 729 325 204 0 22 chr17 18902227 18902317 -76370334 + L1_Mur3 LINE L1 5201 5288 -592 4 729 883 207 10 5 chr17 18902545 18902749 -76369902 - Lx2A LINE L1 -13 6995 6791 4 729 950 264 70 88 chr17 18902749 18903148 -76369503 + RLTR9C LTR ERVK 2 393 0 4 729 6001 193 50 2 chr17 18903148 18904570 -76368081 - Lx2A LINE L1 -211 6797 5285 4 729 30 59 0 0 chr17 18904572 18904623 -76368028 + AT_rich Low_complexity Low_complexity 1 51 0 4 729 329 291 22 22 chr17 18904638 18904775 -76367876 + L1M LINE L1 5262 5398 -961 4 729 981 139 0 0 chr17 18905928 18906079 -76366572 - L1_Mus4 LINE L1 -892 5744 5594 4 729 2826 155 33 5 chr17 18906054 18906605 -76366046 + MusHAL1 LINE L1 1865 2430 -282 4 729 3060 250 53 13 chr17 18907124 18908032 -76364619 + Lx4B LINE L1 5695 6638 -420 4 729 727 245 66 24 chr17 18908192 18908526 -76364125 + L1_Mur2 LINE L1 1244 1591 -4289 4 729 29731 89 18 11 chr17 18908529 18913509 -76359142 + L1Md_F2 LINE L1 628 5585 -298 4 729 7723 61 4 0 chr17 18913510 18914498 -76358153 + L1Md_F2 LINE L1 5587 6578 -4 4 729 26 30 0 0 chr17 18914733 18914766 -76357885 + AT_rich Low_complexity Low_complexity 1 33 0 4 729 18947 181 69 56 chr17 18914767 18920973 -76351678 - L1_Mus2 LINE L1 -2 6567 284 4 729 1240 280 16 53 chr17 18920990 18921612 -76351039 + L1_Mur2 LINE L1 1848 2446 -3431 4 729 3816 223 40 16 chr17 18921610 18922618 -76350033 - L1_Mur2 LINE L1 -493 5384 4353 4 729 2063 304 40 79 chr17 18922608 18923675 -76348976 + Lx2 LINE L1 5895 6920 -77 4 729 1557 148 0 0 chr17 18923720 18923964 -76348687 + L1_Mus1 LINE L1 6324 6567 0 4 729 378 127 0 0 chr17 18923975 18924030 -76348621 + ORR1A3 LTR MaLR 272 326 0 4 729 2656 213 5 4 chr17 18924034 18924589 -76348062 + ORR1A3-int LTR MaLR 5 560 -1403 4 729 286 222 0 0 chr17 18924582 18924645 -76348006 + MT2B2 LTR ERVL 157 219 -365 4 729 393 184 0 0 chr17 18924763 18924839 -76347812 + ORR1A3-int LTR MaLR 844 919 -1044 4 729 3303 211 19 10 chr17 18924817 18925502 -76347149 + ORR1A3-int LTR MaLR 1273 1963 0 4 729 309 312 0 0 chr17 18925502 18925595 -76347056 + ORR1A3 LTR MaLR 1 93 -233 4 729 4239 204 35 6 chr17 18925597 18927000 -76345651 - Lx LINE L1 0 6654 5099 4 729 326 274 0 0 chr17 18927001 18927074 -76345577 + ORR1A3 LTR MaLR 96 168 -159 4 729 11167 81 2 1 chr17 18927074 18928527 -76344124 - IAPEY3-int LTR ERVK -2406 5274 3820 4 729 7260 159 16 35 chr17 18928522 18929833 -76342818 - IAPEY3-int LTR ERVK -6394 1286 1 4 729 1935 123 43 32 chr17 18929833 18930178 -76342473 - IAPEY_LTR LTR ERVK 0 385 37 4 729 364 240 144 0 chr17 18930246 18930371 -76342280 + L1_Mur2 LINE L1 5204 5346 -531 4 729 283 191 0 45 chr17 18930562 18930650 -76342001 - Lx2A LINE L1 -13 6995 6912 4 729 4786 197 18 4 chr17 18930663 18931876 -76340775 - Lx2A LINE L1 -488 6520 5290 4 729 6591 103 11 0 chr17 18932496 18934035 -76338616 - L1Md_F2 LINE L1 0 6582 5020 4 729 508 298 53 13 chr17 18934929 18935157 -76337494 + MYSERV6-int LTR ERVK 1599 1835 -7124 4 729 1178 287 31 3 chr17 18935324 18935649 -76337002 + ORR1A1 LTR MaLR 5 338 -8 4 729 982 341 41 65 chr17 18935763 18936879 -76335772 + MYSERV6-int LTR ERVK 1327 2415 -6544 4 729 37412 19 4 7 chr17 18937198 18942619 -76330032 + L1Md_A LINE L1 188 5586 -297 4 729 8697 20 0 0 chr17 18942619 18943615 -76329036 + L1Md_A LINE L1 5587 6582 0 4 729 494 221 16 8 chr17 18943624 18943743 -76328908 + MYSERV6-int LTR ERVK 2777 2905 -6054 4 729 2838 112 11 50 chr17 18944373 18944851 -76327800 - L1_Mus2 LINE L1 -1 6565 6107 4 729 395 318 46 32 chr17 18945122 18945340 -76327311 + MYSERV-int LTR ERVK 4842 5062 -1488 4 729 541 211 114 93 chr17 18945372 18945565 -76327086 + RMER4A LTR ERVK 242 438 -28 4 729 260 340 56 25 chr17 18946351 18946637 -76326014 + MYSERV-int LTR ERVK 5650 5944 -606 4 729 356 189 83 19 chr17 18947092 18947200 -76325451 + MYSERV-int LTR ERVK 6369 6483 -67 4 729 477 0 0 0 chr17 18948799 18948852 -76323799 + (TC)n Simple_repeat Simple_repeat 2 54 0 4 729 1027 91 7 0 chr17 18948857 18949000 -76323651 - B1_Mm SINE Alu -3 144 1 4 729 216 0 0 0 chr17 18950531 18950555 -76322096 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 729 219 36 0 0 chr17 18950588 18950616 -76322035 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 729 324 259 46 0 chr17 18950721 18950829 -76321822 + Lx9 LINE L1 7522 7634 -10 4 729 34 65 0 0 chr17 18951032 18951094 -76321557 + AT_rich Low_complexity Low_complexity 1 62 0 5 729 29 90 0 0 chr17 18951198 18951276 -76321375 + AT_rich Low_complexity Low_complexity 1 78 0 5 729 287 350 50 20 chr17 18951555 18951654 -76320997 - B3 SINE B2 -108 108 7 5 729 1611 153 55 43 chr17 18951663 18951990 -76320661 + RLTR22_Mur LTR ERVK 305 635 -1213 5 729 1019 161 16 5 chr17 18952134 18952322 -76320329 + RLTR22_Mur LTR ERVK 635 824 -1024 5 729 261 83 0 0 chr17 18952322 18952358 -76320293 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 5 729 388 81 27 0 chr17 18952376 18952450 -76320201 + (TTTTG)n Simple_repeat Simple_repeat 1 76 0 5 729 22 0 0 0 chr17 18953830 18953852 -76318799 + AT_rich Low_complexity Low_complexity 1 22 0 5 729 778 292 147 3 chr17 18955474 18955814 -76316837 + ORR1B1 LTR MaLR 5 393 -1 5 729 2750 308 118 20 chr17 18955935 18957263 -76315388 + ORR1B1-int LTR MaLR 51 1509 0 5 729 1201 290 23 25 chr17 18957263 18957570 -76315081 + ORR1B1 LTR MaLR 1 313 -81 5 729 2167 90 3 48 chr17 18957570 18957907 -76314744 - RLTRETN_Mm LTR ERVK 0 322 1 5 729 1201 290 23 25 chr17 18957907 18957992 -76314659 + ORR1B1 LTR MaLR 314 392 -2 5 729 243 316 0 26 chr17 18958580 18958656 -76313995 + B1_Mus2 SINE Alu 25 100 -49 5 729 348 24 0 0 chr17 18958735 18958776 -76313875 + (TCTA)n Simple_repeat Simple_repeat 1 41 0 5 729 463 413 27 43 chr17 18962151 18962525 -76310126 - ORR1D2 LTR MaLR -2 368 1 5 729 260 389 90 53 chr17 18962624 18962890 -76309761 - MTEa LTR MaLR -86 293 18 5 729 3448 219 55 16 chr17 18963139 18963971 -76308680 - Lx2 LINE L1 -1 6996 6132 5 729 21 0 0 0 chr17 18963976 18963997 -76308654 + AT_rich Low_complexity Low_complexity 1 21 0 5 729 1427 201 75 24 chr17 18965389 18965853 -76306798 - Lx2 LINE L1 -992 5984 5516 5 729 10712 158 40 3 chr17 18965855 18968092 -76304559 - L1_Mus3 LINE L1 -532 6106 3789 5 729 776 228 96 5 chr17 18968064 18968284 -76304367 - L1_Mur1 LINE L1 -336 5550 5311 5 729 542 262 42 161 chr17 18968280 18968400 -76304251 - L1_Mur1 LINE L1 -892 4985 4863 5 729 540 45 0 0 chr17 18968400 18968467 -76304184 + (TCCC)n Simple_repeat Simple_repeat 4 70 0 5 729 594 0 0 0 chr17 18968467 18968532 -76304119 + (TTTC)n Simple_repeat Simple_repeat 2 67 0 5 729 542 262 42 161 chr17 18968532 18968573 -76304078 - L1_Mur1 LINE L1 -1015 4862 4814 5 729 883 130 15 0 chr17 18968573 18968704 -76303947 + B1_Mm SINE Alu 2 134 -13 5 729 542 262 42 161 chr17 18968704 18968847 -76303804 - L1_Mur1 LINE L1 -1064 4813 4724 5 729 366 61 0 0 chr17 18968847 18968896 -76303755 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 5 729 542 262 42 161 chr17 18968896 18968974 -76303677 - L1_Mur1 LINE L1 -1154 4723 4647 5 729 952 138 0 0 chr17 18968979 18969124 -76303527 + B1_Mus2 SINE Alu 3 147 0 5 729 318 72 47 35 chr17 18969146 18969232 -76303419 + (CAAA)n Simple_repeat Simple_repeat 2 88 0 5 729 3689 210 25 1 chr17 18969234 18970096 -76302555 - L1_Mur1 LINE L1 -1222 4664 3782 5 729 1536 235 19 7 chr17 18970092 18970503 -76302148 + L1_Mur2 LINE L1 4210 4625 -1252 5 729 995 136 0 0 chr17 18970684 18970831 -76301820 + B1_Mus2 SINE Alu 1 147 0 5 729 226 26 79 0 chr17 18970831 18970869 -76301782 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 5 729 21 0 0 0 chr17 18971009 18971030 -76301621 + AT_rich Low_complexity Low_complexity 1 21 0 5 729 1423 232 10 0 chr17 18971121 18971427 -76301224 - ORR1A3 LTR MaLR -9 318 10 5 729 4264 249 38 13 chr17 18971435 18972609 -76300042 - ORR1A3-int LTR MaLR 0 1963 760 5 729 354 321 80 0 chr17 18972526 18972638 -76300013 - B1_Mur4 SINE Alu -26 124 4 5 729 235 281 48 68 chr17 18972548 18972651 -76300000 - MT2B2 LTR ERVL -330 254 154 5 729 950 215 73 0 chr17 18972659 18972864 -76299787 - MT2B LTR ERVL -347 254 35 5 729 2527 226 86 54 chr17 18972728 18973452 -76299199 - ORR1A3-int LTR MaLR -1215 748 2 5 729 1471 240 19 19 chr17 18973457 18973775 -76298876 - ORR1A3 LTR MaLR -8 318 1 5 729 31 0 0 0 chr17 18975877 18975908 -76296743 + AT_rich Low_complexity Low_complexity 1 31 0 5 729 540 0 0 0 chr17 18976114 18976174 -76296477 + (TA)n Simple_repeat Simple_repeat 1 60 0 5 729 24 32 0 0 chr17 18976220 18976251 -76296400 + AT_rich Low_complexity Low_complexity 1 31 0 5 729 28 0 0 0 chr17 18976537 18976565 -76296086 + AT_rich Low_complexity Low_complexity 1 28 0 5 729 22 80 0 0 chr17 18976690 18976740 -76295911 + AT_rich Low_complexity Low_complexity 1 50 0 5 729 340 73 61 0 chr17 18977662 18977744 -76294907 + (CAAAAA)n Simple_repeat Simple_repeat 4 90 0 5 729 531 330 60 9 chr17 18978126 18978358 -76294293 - Lx3C LINE L1 -4 6972 6729 5 729 298 327 41 0 chr17 18978329 18978485 -76294166 - Lx4B LINE L1 -517 6541 6378 5 729 13959 75 0 8 chr17 18978638 18981736 -76290915 + L1Md_Gf LINE L1 3 3118 -2768 5 729 515 268 48 24 chr17 18981738 18981864 -76290787 + RNERVK23-int LTR ERVK 7074 7202 -204 5 729 318 273 23 62 chr17 18982433 18982562 -76290089 + RLTR45-int LTR ERVK 181 304 -6940 5 729 1399 228 102 30 chr17 18982789 18983284 -76289367 + RLTR45-int LTR ERVK 241 668 -5469 5 729 468 178 93 0 chr17 18983284 18983402 -76289249 + RLTR45-int LTR ERVK 1721 1849 -5557 5 729 286 291 0 55 chr17 18983413 18983504 -76289147 + RLTR45-int LTR ERVK 2454 2539 -4867 5 729 5085 187 62 94 chr17 18983532 18985366 -76287285 + RLTR45-int LTR ERVK 3583 5907 -1337 5 729 905 314 16 9 chr17 18985389 18985710 -76286941 + RNERVK23-int LTR ERVK 7506 7828 -389 5 729 3988 190 23 10 chr17 18985738 18986439 -76286212 + ETnERV2-int LTR ERVK 6493 7202 -204 5 729 20881 28 0 0 chr17 18986829 18989310 -76283341 + L1Md_T LINE L1 3106 5586 -297 5 729 8263 39 0 0 chr17 18989310 18990306 -76282345 + L1Md_T LINE L1 5587 6582 0 5 729 201 167 0 0 chr17 18990312 18990348 -76282303 + A-rich Low_complexity Low_complexity 1 36 0 5 729 572 328 59 41 chr17 18990519 18990961 -76281690 + Lx9 LINE L1 6912 7361 -283 5 729 2627 227 48 21 chr17 18991257 18991997 -76280654 - L1_Mur2 LINE L1 -2354 5431 4636 5 729 1199 266 9 19 chr17 18992046 18992371 -76280280 + Lx4A LINE L1 6129 6450 -608 5 729 3943 120 59 36 chr17 18992404 18993120 -76279531 - RMER17A LTR ERVK -17 734 3 5 729 6925 67 33 9 chr17 18993123 18994070 -76278581 - RMER17A-int LTR ERVK -1 1727 759 5 729 1220 139 9 57 chr17 18994070 18994299 -76278352 - RMER17A LTR ERVK -533 218 1 5 729 2183 242 46 4 chr17 18994300 18994840 -76277811 + Lx4A LINE L1 6446 7008 -50 5 729 312 209 0 0 chr17 18994936 18995022 -76277629 + (TATG)n Simple_repeat Simple_repeat 1 86 0 5 729 254 307 0 10 chr17 18995112 18995214 -76277437 + CT-rich Low_complexity Low_complexity 2 102 0 5 729 247 248 96 70 chr17 18996052 18996208 -76276443 + RNLTR23 LTR ERVK 483 642 0 5 729 1604 313 58 39 chr17 18997294 18998607 -76274044 + RNERVK23-int LTR ERVK 2330 4424 -2982 5 729 271 267 57 62 chr17 18998815 18998832 -76273819 + RLTR6-int LTR ERV1 6070 6152 -1626 5 729 355 263 42 42 chr17 18998832 18998975 -76273676 + RNERVK23-int LTR ERVK 6189 6331 -1886 5 729 271 267 57 62 chr17 18998975 18998991 -76273660 + RLTR6-int LTR ERV1 6153 6244 -1534 5 729 1329 289 4 1 chr17 19000001 19000425 -76272226 + RNERVK23-int LTR ERVK 7393 7726 -491 1 729 225 290 103 65 chr17 19000745 19000900 -76271751 - MamRep605 Unknown Unknown -453 423 263 2 729 1510 308 69 35 chr17 19000900 19001061 -76271590 - RMER1B Other Other -17 1049 879 3 729 1679 163 42 25 chr17 19001061 19001419 -76271232 - RLTR9A LTR ERVK 0 368 5 4 729 1510 324 75 34 chr17 19001419 19002217 -76270434 - RMER1B Other Other -188 878 3 3 729 239 333 18 65 chr17 19004528 19004698 -76267953 + L1_Mur3 LINE L1 5596 5757 -123 5 729 202 118 0 29 chr17 19004998 19005033 -76267618 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 6 729 315 0 0 0 chr17 19005109 19005144 -76267507 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 729 393 211 18 35 chr17 19005168 19005281 -76267370 + Lx4B LINE L1 5679 5789 -88 8 91 7126 166 25 11 chr17 19005270 19006971 -76265680 + Lx3_Mus LINE L1 5278 7009 0 9 730 2410 276 16 32 chr17 19006992 19007782 -76264869 + Lx4B LINE L1 5785 6562 -496 8 730 3372 274 69 61 chr17 19007789 19008516 -76264135 + L1_Mur2 LINE L1 1311 2054 -3823 1 730 288 102 0 0 chr17 19008516 19008565 -76264086 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 730 3372 274 69 61 chr17 19008565 19009414 -76263237 + L1_Mur2 LINE L1 2055 2938 -2939 1 730 2650 31 6 3 chr17 19009414 19009735 -76262916 - RLTRETN_Mm LTR ERVK 0 322 1 1 730 3372 274 69 61 chr17 19009735 19010212 -76262439 + L1_Mur2 LINE L1 2939 3381 -2496 1 730 1565 195 7 0 chr17 19010216 19010498 -76262153 + ORR1A2 LTR MaLR 3 286 -41 1 730 317 123 53 0 chr17 19010498 19010555 -76262096 - Lx2A LINE L1 -1102 5906 5847 1 730 1337 211 62 0 chr17 19010558 19010866 -76261785 + ORR1A2 LTR MaLR 1 327 0 1 730 3438 251 45 19 chr17 19010866 19011878 -76260773 + ORR1A2-int LTR MaLR 1 1039 -753 1 730 7296 160 12 9 chr17 19011882 19013291 -76259360 - L1Md_F LINE L1 -3298 2588 1091 1 730 513 0 0 0 chr17 19013291 19013348 -76259303 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 730 2245 226 24 68 chr17 19013348 19014354 -76258297 - L1Md_F LINE L1 -5411 1208 284 1 730 1152 298 10 58 chr17 19014379 19015000 -76257651 + L1_Mur2 LINE L1 1856 2446 -3431 1 730 4200 222 10 6 chr17 19014990 19016025 -76256626 - L1_Mur2 LINE L1 -486 5391 4353 1 730 2300 275 60 85 chr17 19016015 19017063 -76255588 + Lx2 LINE L1 5895 6916 -81 2 730 1708 126 0 0 chr17 19017103 19017357 -76255294 + L1_Mus1 LINE L1 6314 6567 0 2 730 362 146 0 0 chr17 19017364 19017419 -76255232 + ORR1A3 LTR MaLR 272 326 0 2 730 1452 223 3 0 chr17 19017423 19017737 -76254914 + ORR1A3-int LTR MaLR 5 319 -1644 2 730 9740 25 5 1 chr17 19017737 19019566 -76253085 - L1Md_A LINE L1 -1 6581 4745 2 730 560 76 0 0 chr17 19019557 19019636 -76253015 + L1_Mm LINE L1 2498 2576 -3307 2 730 1209 226 11 11 chr17 19019636 19019900 -76252751 + ORR1A3-int LTR MaLR 297 560 -1403 2 730 397 187 0 0 chr17 19020068 19020143 -76252508 + ORR1A3-int LTR MaLR 845 919 -1044 2 730 3243 214 20 10 chr17 19020121 19020805 -76251846 + ORR1A3-int LTR MaLR 1273 1963 0 2 730 241 297 97 68 chr17 19020805 19021011 -76251640 + ORR1A3 LTR MaLR 1 212 -114 2 730 4258 196 17 2 chr17 19021038 19022299 -76250352 - Lx LINE L1 -266 6388 5106 2 730 774 204 70 164 chr17 19022299 19022566 -76250085 + ORR1A2 LTR MaLR 94 392 -2 2 730 4354 264 56 18 chr17 19022568 19024318 -76248333 + L1_Mur2 LINE L1 3379 5194 -683 1 730 2608 264 17 14 chr17 19024363 19025063 -76247588 - Lx4A LINE L1 -7 7051 6350 2 730 269 219 56 103 chr17 19025083 19025190 -76247461 + L1_Mur2 LINE L1 1463 1564 -4313 2 730 592 296 48 35 chr17 19025265 19025646 -76247005 + RLTR45 LTR ERVK 45 482 0 2 730 1462 282 42 23 chr17 19025647 19026170 -76246481 + RNERVK23-int LTR ERVK 2 534 -6710 2 730 637 215 0 0 chr17 19027013 19027143 -76245508 + RNERVK23-int LTR ERVK 569 698 -6546 2 730 7927 51 12 0 chr17 19027168 19028490 -76244161 - L1Md_F3 LINE L1 0 6584 5243 3 730 37424 43 0 3 chr17 19028490 19034518 -76238133 - L1Md_T LINE L1 0 6585 477 3 730 835 123 12 99 chr17 19034520 19034691 -76237960 + RLTR6_Mm LTR ERV1 1 156 -498 3 730 480 197 208 49 chr17 19034704 19034992 -76237659 + RLTR6_Mm LTR ERV1 276 609 -45 3 730 1738 90 82 98 chr17 19035031 19035150 -76237501 + MMERGLN-int LTR ERV1 60 284 -3414 3 730 228 118 0 0 chr17 19035150 19035184 -76237467 + tRNA-Arg-AGG tRNA tRNA 43 76 0 3 730 1738 90 82 98 chr17 19035184 19035425 -76237226 + MMERGLN-int LTR ERV1 285 747 -2951 3 730 362 100 219 24 chr17 19035499 19035581 -76237070 + MMVL30-int LTR ERV1 280 377 -2922 3 730 5618 48 0 3 chr17 19035929 19036613 -76236038 + MMVL30-int LTR ERV1 772 1453 -2245 3 730 9618 53 40 10 chr17 19036700 19039074 -76233577 + MMVL30-int LTR ERV1 960 3698 0 3 730 835 123 12 99 chr17 19039074 19039245 -76233406 + RLTR6_Mm LTR ERV1 1 156 -498 3 730 496 195 229 42 chr17 19039258 19039520 -76233131 + RLTR6_Mm LTR ERV1 276 586 -68 3 730 1579 126 0 7 chr17 19039521 19039792 -76232859 - L1Md_Gf LINE L1 -6047 475 207 3 730 3320 50 2 5 chr17 19039795 19040216 -76232435 - L1_Mm LINE L1 -537 5346 4927 3 730 12680 57 6 7 chr17 19040215 19041885 -76230766 + L1_Mm LINE L1 3266 4933 -950 3 730 598 218 8 0 chr17 19042223 19042347 -76230304 + RNERVK23-int LTR ERVK 693 817 -6427 2 730 270 253 26 26 chr17 19042492 19042569 -76230082 + RNERVK23-int LTR ERVK 1828 1904 -5349 2 730 272 246 8 127 chr17 19042579 19042705 -76229946 + RLTR45-int LTR ERVK 912 1022 -6222 3 730 258 56 0 0 chr17 19043013 19043049 -76229602 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 4 730 2881 329 57 45 chr17 19043100 19045790 -76226861 + RNERVK23-int LTR ERVK 2688 5410 -2807 2 730 246 220 0 0 chr17 19045792 19045842 -76226809 + RLTR17 LTR ERVK 490 539 -153 4 730 806 314 13 32 chr17 19045917 19046333 -76226318 + RMER6-int LTR ERVK 1635 2447 -730 4 730 22 0 0 0 chr17 19046378 19046400 -76226251 + AT_rich Low_complexity Low_complexity 1 22 0 4 730 456 339 45 39 chr17 19046418 19046728 -76225923 + RMER6-int LTR ERVK 2692 3003 -2257 4 730 498 242 13 13 chr17 19046976 19047127 -76225524 + RMER6-int LTR ERVK 3300 3450 -1810 4 730 697 305 11 11 chr17 19047132 19047397 -76225254 + RMER6-int LTR ERVK 4677 4941 -319 4 730 2854 133 2 40 chr17 19047781 19048257 -76224394 - L1_Mus2 LINE L1 0 6566 6109 4 730 315 343 83 61 chr17 19048529 19048793 -76223858 + RMER6-int LTR ERVK 4843 5112 -1438 4 730 304 229 162 30 chr17 19048862 19048961 -76223690 + RMER4A LTR ERVK 328 439 -27 4 730 988 269 78 34 chr17 19049874 19050375 -76222276 + MYSERV6-int LTR ERVK 8164 8686 -273 4 730 347 224 74 9 chr17 19050532 19050640 -76222011 + RMER6-int LTR ERVK 6369 6483 -67 4 730 189 0 0 0 chr17 19051100 19051121 -76221530 + (A)n Simple_repeat Simple_repeat 1 21 0 4 730 258 56 0 0 chr17 19052139 19052175 -76220476 + (T)n Simple_repeat Simple_repeat 1 36 0 4 730 1159 62 7 0 chr17 19052177 19052323 -76220328 - B1_Mm SINE Alu 0 147 1 4 730 396 0 0 0 chr17 19052331 19052375 -76220276 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 730 21 36 0 0 chr17 19053293 19053321 -76219330 + AT_rich Low_complexity Low_complexity 1 28 0 5 730 242 339 114 18 chr17 19054097 19054211 -76218440 - B3 SINE B2 -90 126 2 5 730 3132 194 16 14 chr17 19054359 19054993 -76217658 + RLTR22_Mur LTR ERVK 1 635 -1213 5 730 914 183 16 0 chr17 19055138 19055324 -76217327 + RLTR22_Mur LTR ERVK 635 823 -1025 5 730 192 40 0 0 chr17 19055324 19055349 -76217302 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 5 730 276 30 0 0 chr17 19055358 19055391 -76217260 + (TGG)n Simple_repeat Simple_repeat 1 33 0 5 730 273 75 0 0 chr17 19055392 19055432 -76217219 + (TTTTG)n Simple_repeat Simple_repeat 3 42 0 5 730 12967 70 2 13 chr17 19055575 19057348 -76215303 + L1Md_F2 LINE L1 3833 5586 -297 5 730 8002 56 0 1 chr17 19057348 19058344 -76214307 + L1Md_F2 LINE L1 5587 6581 -1 5 730 351 0 0 0 chr17 19059529 19059568 -76213083 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 730 530 15 15 0 chr17 19059835 19059902 -76212749 + (TA)n Simple_repeat Simple_repeat 1 68 0 5 730 777 288 165 18 chr17 19061323 19061663 -76210988 + ORR1B1 LTR MaLR 5 394 0 6 730 269 183 56 0 chr17 19061702 19061773 -76210878 + (TTTA)n Simple_repeat Simple_repeat 4 78 0 6 730 2620 290 132 32 chr17 19061773 19063096 -76209555 + ORR1B1-int LTR MaLR 55 1509 0 6 730 1267 293 18 3 chr17 19063096 19063476 -76209175 + ORR1B1 LTR MaLR 1 386 -8 6 730 300 307 86 26 chr17 19064067 19064184 -76208467 + B1_Mm SINE Alu 23 146 -1 6 730 195 42 0 0 chr17 19064241 19064265 -76208386 + (TA)n Simple_repeat Simple_repeat 2 25 0 6 730 381 22 0 0 chr17 19064267 19064313 -76208338 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 6 730 1275 35 23 11 chr17 19065575 19065749 -76206902 + L1Md_F3 LINE L1 6409 6584 0 6 730 378 413 32 48 chr17 19067733 19068107 -76204544 - ORR1D2 LTR MaLR -2 368 1 6 730 1879 112 28 22 chr17 19068471 19068791 -76203860 - RLTRETN_Mm LTR ERVK 0 322 1 6 730 17536 139 20 15 chr17 19068791 19075560 -76197091 - ETnERV2-int LTR ERVK -204 7202 1 6 730 1858 112 28 22 chr17 19075560 19075880 -76196771 - RLTRETN_Mm LTR ERVK 0 322 1 6 730 3920 203 18 15 chr17 19076132 19076977 -76195674 - Lx2 LINE L1 -5 6992 6146 6 730 21 0 0 0 chr17 19076997 19077018 -76195633 + AT_rich Low_complexity Low_complexity 1 21 0 6 730 191 0 103 0 chr17 19078179 19078208 -76194443 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 7 730 1329 209 80 19 chr17 19078399 19078856 -76193795 - Lx2 LINE L1 -991 5982 5516 6 730 10020 162 32 5 chr17 19078861 19081116 -76191535 - L1_Mus3 LINE L1 -534 6104 3796 7 730 842 197 89 9 chr17 19081092 19081317 -76191334 - L1_Mur2 LINE L1 -333 5553 5311 7 730 319 280 0 8 chr17 19081321 19081440 -76191211 - L1_Mur2 LINE L1 -901 4985 4868 7 730 1578 11 0 0 chr17 19081445 19081625 -76191026 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 7 730 714 159 0 0 chr17 19081643 19081769 -76190882 + CT-rich Low_complexity Low_complexity 2 127 0 7 730 681 157 0 18 chr17 19081815 19081925 -76190726 + B1_Mm SINE Alu 3 110 -37 7 730 2316 227 13 94 chr17 19081939 19082057 -76190594 - L1_Mur2 LINE L1 -1065 4812 4724 7 730 207 0 0 0 chr17 19082057 19082080 -76190571 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 7 730 2316 227 13 94 chr17 19082080 19082162 -76190489 - L1_Mur2 LINE L1 -1154 4723 4657 7 730 998 136 0 0 chr17 19082162 19082309 -76190342 + B1_Mus2 SINE Alu 1 147 0 7 730 2316 227 13 94 chr17 19082309 19082935 -76189716 - L1_Mur2 LINE L1 -1221 4656 4052 7 730 772 203 0 42 chr17 19082935 19083079 -76189572 - ORR1A3 LTR MaLR -186 140 3 7 730 22 0 0 0 chr17 19083086 19083108 -76189543 + AT_rich Low_complexity Low_complexity 1 22 0 7 730 24 0 0 0 chr17 19083133 19083157 -76189494 + AT_rich Low_complexity Low_complexity 1 24 0 8 730 23 33 0 0 chr17 19085195 19085225 -76187426 + AT_rich Low_complexity Low_complexity 1 30 0 8 730 26 64 0 0 chr17 19085428 19085475 -76187176 + AT_rich Low_complexity Low_complexity 1 47 0 8 730 27 0 0 0 chr17 19085805 19085832 -76186819 + AT_rich Low_complexity Low_complexity 1 27 0 8 730 21 82 0 0 chr17 19085957 19086006 -76186645 + AT_rich Low_complexity Low_complexity 1 49 0 8 730 380 330 64 9 chr17 19087321 19087541 -76185110 - Lx3C LINE L1 -4 6972 6741 8 730 1009 225 86 9 chr17 19087953 19088421 -76184230 - Lx4A LINE L1 -502 6556 6053 8 730 1637 196 112 7 chr17 19088448 19088894 -76183757 + Lx4A LINE L1 6564 7056 -2 8 730 264 59 0 0 chr17 19088926 19088960 -76183691 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8 730 232 351 133 25 chr17 19089136 19089542 -76183109 + Lx9 LINE L1 6912 7361 -283 8 730 2616 218 39 25 chr17 19089860 19090609 -76182042 - L1_Mur2 LINE L1 -499 5378 4620 9 730 1058 298 0 0 chr17 19090637 19090959 -76181692 + Lx4A LINE L1 6129 6450 -608 9 730 1812 136 12 51 chr17 19090959 19091504 -76181147 - RMER17A LTR ERVK 0 751 4 9 730 6534 86 41 1 chr17 19091508 19092674 -76179977 - RMER17A-int LTR ERVK 0 1728 174 9 730 2911 142 111 31 chr17 19092681 19093232 -76179419 - RLTR1D LTR ERV1 -10 595 1 9 730 1226 102 0 11 chr17 19093232 19093410 -76179241 - RMER17A-int LTR ERVK -1551 177 2 9 730 3716 130 105 41 chr17 19093411 19094117 -76178534 - RMER17A LTR ERVK 0 751 1 9 730 1893 258 43 2 chr17 19094118 19094658 -76177993 + Lx4A LINE L1 6446 7007 -51 9 730 225 0 0 0 chr17 19096064 19096089 -76176562 + (A)n Simple_repeat Simple_repeat 1 25 0 9 730 387 304 37 43 chr17 19097356 19097679 -76174972 + RNERVK23-int LTR ERVK 1706 2026 -4141 9 730 1872 120 43 13 chr17 19097837 19098141 -76174510 + IAPLTR2b LTR ERVK 1 313 -14 9 730 35600 82 25 12 chr17 19098156 19103313 -76169338 + IAPEz-int LTR ERVK 1 5424 -1057 9 730 4184 97 30 23 chr17 19103311 19103975 -76168676 + IAPEz-int LTR ERVK 5813 6481 0 9 730 2088 124 3 9 chr17 19103975 19104293 -76168358 + IAPLTR2b LTR ERVK 1 316 -11 9 730 659 296 29 22 chr17 19104469 19104784 -76167867 + RNERVK23-int LTR ERVK 2753 3069 -5148 9 730 294 157 123 41 chr17 19104841 19104914 -76167737 - IAPLTR4 LTR ERVK -8 337 259 9 730 2072 269 106 33 chr17 19105018 19105887 -76166764 - IAPLTR3-int LTR ERVK -5878 943 12 9 730 2180 116 3 18 chr17 19105903 19106245 -76166406 - IAPLTR4 LTR ERVK -8 337 1 9 730 1153 313 22 34 chr17 19106307 19107185 -76165466 + RNERVK23-int LTR ERVK 2894 3853 -3660 9 730 886 121 8 8 chr17 19107262 19107395 -76165256 - B1_Mm SINE Alu -1 146 14 9 730 377 280 47 47 chr17 19107458 19107694 -76164957 + RNERVK23-int LTR ERVK 4209 4444 -3773 9 730 1187 323 100 56 chr17 19108168 19110853 -76161798 + RNERVK23-int LTR ERVK 4945 7726 -491 9 730 4032 81 29 9 chr17 19111527 19112076 -76160575 - LTRIS2 LTR ERV1 0 564 5 1 730 834 111 26 7 chr17 19112695 19112849 -76159802 + (TTTTC)n Simple_repeat Simple_repeat 2 158 0 1 730 356 220 11 32 chr17 19112855 19112949 -76159702 + CT-rich Low_complexity Low_complexity 1 92 0 1 730 356 300 77 0 chr17 19112949 19113079 -76159572 - RMER15 LTR ERVL -99 476 337 1 730 203 152 21 42 chr17 19113176 19113224 -76159427 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 1 730 1642 303 68 45 chr17 19113684 19113859 -76158792 - RMER1B Other Other -5 1061 879 1 730 1690 174 39 25 chr17 19113859 19114219 -76158432 - RLTR9A LTR ERVK -1 367 3 1 730 1642 324 72 40 chr17 19114219 19115019 -76157632 - RMER1B Other Other -188 878 3 1 730 378 387 0 16 chr17 19115184 19115368 -76157283 - Lx5 LINE L1 -17 7033 6853 1 730 16392 70 8 1 chr17 19115867 19118040 -76154611 - L1_Mm LINE L1 -230 5653 3464 1 730 269 315 70 0 chr17 19118041 19118184 -76154467 + MYSERV6-int LTR ERVK 2744 2896 -6063 1 730 625 292 21 8 chr17 19118191 19118426 -76154225 + MYSERV6-int LTR ERVK 4123 4360 -4599 1 730 470 290 115 18 chr17 19119125 19119290 -76153361 + RMER4A LTR ERVK 259 439 -27 1 730 396 0 0 0 chr17 19119596 19119640 -76153011 + (TAA)n Simple_repeat Simple_repeat 2 45 0 1 730 5821 131 10 3 chr17 19119894 19120820 -76151831 + L1_Mus3 LINE L1 5699 6630 -8 1 730 1046 307 36 44 chr17 19120905 19121617 -76151034 + MYSERV6-int LTR ERVK 8129 8685 -274 1 730 23 78 0 0 chr17 19121732 19121783 -76150868 + AT_rich Low_complexity Low_complexity 1 51 0 1 730 4607 114 13 3 chr17 19121786 19122483 -76150168 - L1_Mus2 LINE L1 -1 6565 5862 1 730 1180 208 17 41 chr17 19122485 19122847 -76149804 - L1_Mur1 LINE L1 -1733 4153 3801 1 730 757 238 29 0 chr17 19122861 19123067 -76149584 + L1_Mur2 LINE L1 4210 4421 -1456 1 730 3235 247 34 118 chr17 19123071 19123847 -76148804 - ORR1A3-int LTR MaLR -781 1182 524 1 730 2270 78 21 56 chr17 19123847 19124186 -76148465 + IAPLTR2b LTR ERVK 1 327 0 1 730 3235 247 34 118 chr17 19124186 19124698 -76147953 - ORR1A3-int LTR MaLR -1440 523 2 1 730 1152 282 36 7 chr17 19124699 19125002 -76147649 - ORR1A3 LTR MaLR -14 312 1 1 730 21 36 0 0 chr17 19125032 19125060 -76147591 + AT_rich Low_complexity Low_complexity 1 28 0 1 730 1993 230 8 28 chr17 19125895 19126400 -76146251 + Lx LINE L1 6161 6654 0 1 730 2634 107 14 12 chr17 19126689 19127106 -76145545 - BGLII LTR ERVK 0 421 4 1 730 370 276 49 7 chr17 19129005 19129147 -76143504 + L1M3 LINE L1 5122 5269 -871 1 730 279 167 139 4 chr17 19129518 19129592 -76143059 + Lx4B LINE L1 6540 6623 -435 1 730 340 283 387 16 chr17 19129594 19129842 -76142809 + L1_Mur2 LINE L1 1004 1343 -5743 1 730 1217 290 25 64 chr17 19129847 19130225 -76142426 + L1_Mur2 LINE L1 1675 2047 -3830 1 730 399 21 0 0 chr17 19130225 19130273 -76142378 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 730 1217 290 25 64 chr17 19130273 19130539 -76142112 + L1_Mur2 LINE L1 2048 2294 -3583 1 730 715 266 18 23 chr17 19130536 19130755 -76141896 + Lx2B LINE L1 6078 6295 -705 1 730 2940 24 0 0 chr17 19130755 19131092 -76141559 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 730 23113 34 43 14 chr17 19131092 19133962 -76138689 + IAPEz-int LTR ERVK 8 2961 -3520 1 730 10196 20 3 0 chr17 19133956 19135110 -76137541 + IAPEz-int LTR ERVK 5325 6481 0 1 730 2620 28 0 0 chr17 19135117 19135435 -76137216 + IAPLTR1a_Mm LTR ERVK 20 337 0 1 730 364 123 53 0 chr17 19135435 19135492 -76137159 + Lx2B LINE L1 6290 6349 -651 1 730 1475 185 128 0 chr17 19135497 19135795 -76136856 - Lx2A LINE L1 -2 6995 6660 1 730 666 179 0 29 chr17 19135800 19135938 -76136713 + MusHAL1 LINE L1 1435 1568 -1144 1 91 2591 235 16 16 chr17 19135935 19136561 -76136090 + Lx2 LINE L1 6333 6958 -39 1 731 314 215 42 0 chr17 19136566 19136642 -76136009 + ORR1A2 LTR MaLR 275 421 0 1 731 5492 216 21 13 chr17 19136646 19137966 -76134685 + ORR1A2-int LTR MaLR 5 1963 0 1 731 427 231 11 11 chr17 19137966 19138058 -76134593 + ORR1A2 LTR MaLR 1 92 -235 1 731 606 14 0 0 chr17 19138083 19138154 -76134497 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 731 801 244 10 34 chr17 19138171 19138379 -76134272 + RLTR17 LTR ERVK 408 610 -82 1 731 1906 125 9 51 chr17 19138459 19138795 -76133856 - RLTRETN_Mm LTR ERVK 0 322 1 1 731 721 141 7 75 chr17 19138795 19138821 -76133830 - MMETn-int LTR ERVK 0 4844 4823 1 731 207 0 0 0 chr17 19138821 19138844 -76133807 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1 731 721 141 7 75 chr17 19138844 19138963 -76133688 - MMETn-int LTR ERVK -22 4822 4709 1 731 242 301 103 54 chr17 19138963 19139167 -76133484 - RLTR13A2 LTR ERVK -468 490 277 1 731 8651 119 30 23 chr17 19139168 19140557 -76132094 - ETnERV-int LTR ERVK -259 3055 1658 1 731 6566 68 4 4 chr17 19140601 19141674 -76130977 - MMETn-int LTR ERVK -1619 3225 2365 1 731 3930 174 21 8 chr17 19141674 19142622 -76130029 - Lx2A LINE L1 -741 6267 5285 1 731 220 89 88 12 chr17 19142624 19142704 -76129947 + (TA)n Simple_repeat Simple_repeat 2 87 0 1 731 252 268 20 26 chr17 19142706 19142859 -76129792 + L1_Mur3 LINE L1 5213 5364 -516 1 731 22 0 0 0 chr17 19143319 19143341 -76129310 + AT_rich Low_complexity Low_complexity 1 22 0 1 731 769 191 12 0 chr17 19143486 19143648 -76129003 + L1_Mur2 LINE L1 3513 3676 -2201 1 731 2723 252 57 17 chr17 19144076 19144906 -76127745 + Lx4B LINE L1 5776 6638 -420 1 731 900 271 47 31 chr17 19145055 19145626 -76127025 + L1_Mur3 LINE L1 1238 1817 -4063 1 731 25706 160 29 37 chr17 19145650 19152020 -76120631 - L1_Mus2 LINE L1 0 6566 295 1 731 893 291 12 78 chr17 19152036 19152216 -76120435 + L1_Mur3 LINE L1 1849 2029 -3851 1 731 1592 47 0 0 chr17 19152216 19152409 -76120242 + B2_Mm1t SINE B2 1 193 0 1 731 893 291 12 78 chr17 19152409 19152743 -76119908 + L1_Mur3 LINE L1 2030 2329 -3551 1 731 1007 232 39 4 chr17 19152747 19153007 -76119644 - Lx2A LINE L1 -851 5026 4758 1 731 371 248 24 16 chr17 19152993 19153116 -76119535 + L1_Mur2 LINE L1 2323 2446 -3431 1 731 4024 221 16 6 chr17 19153114 19154136 -76118515 - L1_Mur2 LINE L1 -493 5384 4353 1 731 2316 281 52 88 chr17 19154126 19155212 -76117439 + Lx2 LINE L1 5895 6942 -55 1 731 1697 126 0 0 chr17 19155218 19155472 -76117179 + L1_Mus1 LINE L1 6314 6567 0 1 731 356 146 0 0 chr17 19155484 19155539 -76117112 + ORR1A2 LTR MaLR 272 326 0 1 731 3253 238 39 37 chr17 19155543 19157002 -76115649 + ORR1A2-int LTR MaLR 5 1963 0 1 731 230 315 11 0 chr17 19157002 19157094 -76115557 + ORR1A2 LTR MaLR 1 93 -233 1 731 4149 204 24 5 chr17 19157104 19158502 -76114149 - Lx LINE L1 -1 6565 5106 1 731 356 237 40 0 chr17 19158503 19158579 -76114072 + ORR1A2 LTR MaLR 86 164 -163 1 731 2744 55 0 88 chr17 19158579 19158979 -76113672 + RLTR10B2 LTR ERVK 1 365 0 1 731 1591 108 6 12 chr17 19158979 19159299 -76113352 + MMERVK10C-int LTR ERVK 1 399 -7182 1 731 38585 71 2 2 chr17 19159297 19164238 -76108413 + MMERVK10C-int LTR ERVK 870 5810 -1771 1 731 6649 70 9 68 chr17 19164230 19165197 -76107454 + MMERVK10C-int LTR ERVK 6652 7561 -20 1 731 603 217 52 167 chr17 19165197 19165217 -76107434 + ORR1A2 LTR MaLR 140 158 -169 1 731 2729 60 40 6 chr17 19165217 19165570 -76107081 + RLTR10B2 LTR ERVK 1 365 0 1 731 603 217 52 167 chr17 19165570 19165759 -76106892 + ORR1A2 LTR MaLR 159 325 -2 1 731 4340 278 42 16 chr17 19165761 19167525 -76105126 + L1_Mur2 LINE L1 3379 5188 -689 1 731 2763 262 16 13 chr17 19167571 19168271 -76104380 - Lx4A LINE L1 -7 7051 6350 1 731 361 208 10 29 chr17 19168291 19168395 -76104256 + L1_Mur2 LINE L1 1463 1564 -4313 1 731 1492 70 0 0 chr17 19168825 19169024 -76103627 - RLTR10 LTR ERVK -191 199 1 1 731 548 234 0 24 chr17 19170262 19170389 -76102262 + RLTR45-int LTR ERVK 569 692 -6552 1 731 537 242 8 0 chr17 19170755 19170879 -76101772 + RLTR45-int LTR ERVK 693 817 -6427 1 731 331 252 37 104 chr17 19171110 19171274 -76101377 + RLTR45-int LTR ERVK 912 1064 -6180 1 731 315 0 0 0 chr17 19171546 19171581 -76101070 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 731 2894 325 61 52 chr17 19171620 19174487 -76098164 + RNERVK23-int LTR ERVK 2672 5564 -2653 1 731 1158 193 83 113 chr17 19174500 19174827 -76097824 - IAPEY3_LTR LTR ERVK -15 317 1 1 731 4424 129 14 23 chr17 19174827 19175723 -76096928 - IAPEY3-int LTR ERVK 0 7581 6743 1 731 3274 108 0 2 chr17 19175713 19176168 -76096483 - IAPEY3-int LTR ERVK -1367 6214 5761 1 731 3129 111 0 16 chr17 19176159 19176606 -76096045 - IAPEY3-int LTR ERVK -1939 5642 5203 1 731 776 103 35 49 chr17 19176861 19177004 -76095647 - IAPEY3-int LTR ERVK -2911 4670 4530 1 731 450 208 19 0 chr17 19177030 19177136 -76095515 - MMETn-int LTR ERVK -2380 2464 2357 1 731 1333 133 141 18 chr17 19177141 19177717 -76094934 - IAPEY3-int LTR ERVK -2648 4596 3718 1 731 670 193 0 0 chr17 19177735 19177854 -76094797 - ETnERV2-int LTR ERVK -4653 2753 2635 1 731 342 250 0 56 chr17 19177868 19177957 -76094694 - ETnERV2-int LTR ERVK -4869 2537 2454 1 731 434 234 90 0 chr17 19177970 19178081 -76094570 - RMER16-int LTR ERVK -5077 1060 940 1 731 1533 205 97 46 chr17 19178087 19178558 -76094093 - RMER16-int LTR ERVK -4750 656 255 1 731 5280 118 22 18 chr17 19178677 19179524 -76093127 - IAPLTR4_I LTR ERVK -6629 952 11 1 731 1409 184 92 0 chr17 19179524 19179817 -76092834 - IAPLTR4_I LTR ERVK -12 320 1 1 731 309 294 24 32 chr17 19179848 19179971 -76092680 + ETnERV-int LTR ERVK 1774 1895 -1419 1 731 429 304 7 7 chr17 19180392 19180538 -76092113 + ETnERV2-int LTR ERVK 6192 6337 -1880 1 731 331 162 39 51 chr17 19180472 19180550 -76092101 + RLTR6-int LTR ERV1 6170 6246 -1532 1 731 806 311 20 20 chr17 19180950 19181255 -76091396 + RLTR45-int LTR ERVK 1333 1637 -5607 1 731 1177 307 42 30 chr17 19181306 19182115 -76090536 + ETnERV2-int LTR ERVK 6331 7804 -413 1 731 1713 226 22 62 chr17 19182186 19182638 -76090013 + ETnERV2-int LTR ERVK 6647 7080 -326 1 731 619 250 65 37 chr17 19182925 19183141 -76089510 + RLTR45 LTR ERVK 261 482 0 1 731 4635 187 74 16 chr17 19183148 19183614 -76089037 + L1_Mur2 LINE L1 1567 2062 -3815 1 731 549 110 0 0 chr17 19183614 19183714 -76088937 + (CA)n Simple_repeat Simple_repeat 2 101 0 1 731 4635 187 74 16 chr17 19183714 19184437 -76088214 + L1_Mur2 LINE L1 2063 2824 -3053 1 731 2443 223 44 11 chr17 19184458 19184980 -76087671 + RLTR17 LTR ERVK 1 539 -153 1 731 1032 316 77 69 chr17 19185022 19186327 -76086324 + MYSERV6-int LTR ERVK 1591 2906 -6053 1 731 427 323 35 38 chr17 19186326 19186587 -76086064 + MYSERV6-int LTR ERVK 3907 4166 -2384 1 731 2986 108 8 30 chr17 19186979 19187447 -76085204 - L1_Mus2 LINE L1 0 6566 6109 1 731 303 293 78 67 chr17 19187720 19187899 -76084752 + MYSERV6-int LTR ERVK 4843 5023 -1527 1 731 400 254 34 42 chr17 19188042 19188161 -76084490 + RMER4A LTR ERVK 322 439 -27 1 731 236 348 11 33 chr17 19188080 19188172 -76084479 + LTR78 LTR ERV1 862 951 -353 1 731 1071 270 68 30 chr17 19189048 19189548 -76083103 + MYSERV6-int LTR ERVK 8168 8686 -273 1 731 225 0 0 0 chr17 19190267 19190292 -76082359 + (A)n Simple_repeat Simple_repeat 1 25 0 1 731 486 0 0 0 chr17 19191282 19191336 -76081315 + (TC)n Simple_repeat Simple_repeat 2 55 0 1 731 1084 88 0 20 chr17 19191365 19191515 -76081136 - B1_Mus2 SINE Alu 0 147 1 1 731 323 235 51 17 chr17 19193214 19193331 -76079320 + Lx9 LINE L1 7522 7642 -2 1 731 23 68 0 0 chr17 19193533 19193577 -76079074 + AT_rich Low_complexity Low_complexity 1 44 0 1 731 21 36 0 0 chr17 19193689 19193717 -76078934 + AT_rich Low_complexity Low_complexity 1 28 0 1 731 278 339 114 18 chr17 19194040 19194154 -76078497 - B3 SINE B2 -90 126 2 1 731 21 0 0 0 chr17 19194180 19194201 -76078450 + AT_rich Low_complexity Low_complexity 1 21 0 1 731 3228 192 6 9 chr17 19194302 19194939 -76077712 + RLTR22_Mur LTR ERVK 1 635 -1213 1 731 999 166 26 0 chr17 19195084 19195277 -76077374 + RLTR22_Mur LTR ERVK 635 832 -1016 1 731 272 44 41 82 chr17 19195277 19195307 -76077344 + T-rich Low_complexity Low_complexity 70 96 0 1 731 189 0 0 0 chr17 19195307 19195328 -76077323 + (TGG)n Simple_repeat Simple_repeat 1 21 0 1 731 272 44 41 82 chr17 19195328 19195395 -76077256 + T-rich Low_complexity Low_complexity 3 69 0 1 731 28 29 0 0 chr17 19196988 19197023 -76075628 + AT_rich Low_complexity Low_complexity 1 35 0 1 731 351 44 0 0 chr17 19197023 19197068 -76075583 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 731 490 304 159 12 chr17 19198461 19198801 -76073850 + ORR1B1 LTR MaLR 5 394 0 1 731 223 209 29 43 chr17 19198846 19198916 -76073735 + (TTTG)n Simple_repeat Simple_repeat 4 72 0 1 731 2957 288 134 21 chr17 19198916 19200223 -76072428 + ORR1B1-int LTR MaLR 55 1509 0 1 731 1189 297 24 3 chr17 19200223 19200601 -76072050 + ORR1B1 LTR MaLR 1 386 -8 1 731 321 316 86 26 chr17 19201186 19201303 -76071348 + B1_Mm SINE Alu 23 146 -1 1 731 308 24 0 24 chr17 19201353 19201395 -76071256 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 731 363 414 28 51 chr17 19204740 19205096 -76067555 - ORR1D2 LTR MaLR -6 364 17 1 731 24 72 0 14 chr17 19205688 19205716 -76066935 + AT_rich Low_complexity Low_complexity 1 28 0 1 731 3955 202 19 14 chr17 19205716 19206563 -76066088 - Lx2 LINE L1 -1 6996 6146 2 731 24 72 0 14 chr17 19206563 19206604 -76066047 + AT_rich Low_complexity Low_complexity 1 41 0 2 731 23 33 0 0 chr17 19207664 19207694 -76064957 + AT_rich Low_complexity Low_complexity 1 30 0 2 731 229 307 0 11 chr17 19207849 19207938 -76064713 + ORR1A4 LTR MaLR 186 273 -56 2 731 1651 227 26 3 chr17 19208003 19208075 -76064576 - Lx3C LINE L1 -992 5984 5913 2 731 225 0 0 0 chr17 19208075 19208100 -76064551 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2 731 1651 198 49 3 chr17 19208100 19208482 -76064169 - Lx3C LINE L1 -1064 5912 5516 2 731 10909 159 24 3 chr17 19208485 19210766 -76061885 - L1_Mus3 LINE L1 -532 6106 3789 2 731 816 202 86 9 chr17 19210750 19210960 -76061691 - Lx3C LINE L1 -350 5536 5311 2 731 3804 220 22 119 chr17 19210952 19211211 -76061440 - Lx3C LINE L1 -888 4998 4820 2 731 988 98 0 0 chr17 19211211 19211344 -76061307 + B1_Mm SINE Alu 2 134 -13 2 731 3804 220 22 119 chr17 19211344 19212431 -76060220 - Lx3C LINE L1 -1067 4819 3782 2 731 1315 243 19 14 chr17 19212427 19212841 -76059810 + L1_Mur2 LINE L1 4210 4625 -1252 2 731 1032 111 0 0 chr17 19213007 19213151 -76059500 + B1_Mm SINE Alu 1 144 -3 2 731 297 68 0 0 chr17 19213152 19213196 -76059455 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 2 731 1358 225 13 0 chr17 19213448 19213746 -76058905 - ORR1A3 LTR MaLR -15 311 10 2 731 4840 245 60 107 chr17 19213754 19214381 -76058270 - ORR1A3-int LTR MaLR 0 1963 1313 2 731 477 0 0 0 chr17 19214381 19214434 -76058217 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 731 4840 245 60 107 chr17 19214434 19214579 -76058072 - ORR1A3-int LTR MaLR -651 1312 1168 2 731 1124 81 0 20 chr17 19214579 19214730 -76057921 + B1_Mus1 SINE Alu 1 148 0 2 731 4840 245 60 107 chr17 19214730 19216013 -76056638 - ORR1A3-int LTR MaLR -796 1167 4 2 731 1393 229 21 19 chr17 19216014 19216339 -76056312 - ORR1A3 LTR MaLR 0 326 1 2 731 24 0 0 0 chr17 19216341 19216365 -76056286 + AT_rich Low_complexity Low_complexity 1 24 0 2 731 22 0 0 0 chr17 19218728 19218750 -76053901 + AT_rich Low_complexity Low_complexity 1 22 0 2 731 23 0 0 0 chr17 19219047 19219070 -76053581 + AT_rich Low_complexity Low_complexity 1 23 0 2 731 21 0 0 0 chr17 19219122 19219143 -76053508 + AT_rich Low_complexity Low_complexity 1 21 0 2 731 28 61 0 0 chr17 19219195 19219244 -76053407 + AT_rich Low_complexity Low_complexity 1 49 0 2 731 3179 56 5 0 chr17 19220067 19220461 -76052190 - MTA_Mm LTR MaLR 0 396 1 2 731 22 0 0 0 chr17 19220939 19220961 -76051690 + AT_rich Low_complexity Low_complexity 1 22 0 2 731 403 316 85 11 chr17 19220989 19221185 -76051466 - Lx3C LINE L1 -58 6942 6724 2 731 321 294 48 14 chr17 19221155 19221312 -76051339 - Lx3C LINE L1 -517 6541 6378 2 731 1071 231 88 11 chr17 19221587 19222055 -76050596 - Lx4A LINE L1 -502 6556 6053 2 731 1932 209 102 10 chr17 19222057 19222549 -76050102 + Lx4A LINE L1 6520 7056 -2 2 731 522 341 66 47 chr17 19222778 19223205 -76049446 + Lx9 LINE L1 6912 7346 -298 2 731 2859 218 19 20 chr17 19223538 19224282 -76048369 - L1_Mur2 LINE L1 -499 5378 4636 2 731 3633 248 38 1 chr17 19224335 19225180 -76047471 + Lx4A LINE L1 6133 7008 -50 2 731 338 333 8 30 chr17 19225239 19225372 -76047279 + RMER12 LTR ERVK 735 864 -458 2 731 219 244 51 17 chr17 19225386 19225533 -76047118 + (TCTCTG)n Simple_repeat Simple_repeat 1 152 0 2 731 22 0 0 0 chr17 19226520 19226542 -76046109 + AT_rich Low_complexity Low_complexity 1 22 0 2 731 303 297 43 14 chr17 19226586 19226726 -76045925 - L1MD LINE L1 -2921 3225 3082 2 731 206 264 14 14 chr17 19226726 19226799 -76045852 + T-rich Low_complexity Low_complexity 4 76 0 2 731 1049 103 0 12 chr17 19226801 19226968 -76045683 + (TTTC)n Simple_repeat Simple_repeat 3 167 0 2 731 327 305 108 18 chr17 19226969 19227136 -76045515 - RMER15 LTR ERVL -99 476 295 2 731 180 0 0 0 chr17 19227190 19227210 -76045441 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 731 234 230 52 39 chr17 19227226 19227303 -76045348 - RMER15 LTR ERVL -472 103 26 2 731 1619 317 63 21 chr17 19227683 19227856 -76044795 - RMER1B Other Other -5 1061 879 2 731 1517 183 65 28 chr17 19227856 19228211 -76044440 - RLTR9A LTR ERVK 0 368 1 2 731 1619 341 60 22 chr17 19228211 19228996 -76043655 - RMER1B Other Other -188 878 3 2 731 9636 85 17 1 chr17 19229951 19232002 -76040649 - L1Md_F2 LINE L1 -12 6570 4478 2 731 369 328 72 70 chr17 19232622 19233195 -76039456 + L1M2 LINE L1 4827 5400 -743 2 731 4145 35 12 0 chr17 19233355 19233842 -76038809 + MT2_Mm LTR ERVL 1 493 0 2 731 294 316 67 40 chr17 19233842 19234066 -76038585 + L1_Mur3 LINE L1 5528 5757 -123 2 731 605 47 12 0 chr17 19234366 19234451 -76038200 + (CAAAA)n Simple_repeat Simple_repeat 1 86 0 2 731 299 61 41 0 chr17 19234527 19234576 -76038075 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 2 731 7238 170 18 5 chr17 19234616 19236414 -76036237 + Lx3_Mus LINE L1 5210 7009 0 2 731 1787 252 0 37 chr17 19236440 19236959 -76035692 + Lx4B LINE L1 5784 6283 -775 2 731 569 293 0 6 chr17 19236983 19237158 -76035493 + Lx4B LINE L1 6404 6577 -481 2 731 3482 282 55 60 chr17 19237150 19237907 -76034744 + L1_Mur2 LINE L1 1314 2057 -3820 2 731 228 86 0 0 chr17 19237907 19237942 -76034709 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 731 3482 282 55 60 chr17 19237942 19239261 -76033390 + L1_Mur2 LINE L1 2058 3381 -2496 2 731 1365 215 68 3 chr17 19239265 19239559 -76033092 + ORR1A2 LTR MaLR 3 315 -12 2 731 1535 192 45 0 chr17 19239591 19239904 -76032747 + ORR1A2 LTR MaLR 1 327 0 2 731 1297 158 9 0 chr17 19239904 19240126 -76032525 + ORR1A2-int LTR MaLR 1 224 -1739 2 731 295 257 0 0 chr17 19240134 19240204 -76032447 - Lx4A LINE L1 -144 6914 6845 2 731 1975 119 21 0 chr17 19240197 19240524 -76032127 - L1_Mm LINE L1 -2529 3354 3021 2 731 1362 97 19 19 chr17 19240545 19240755 -76031896 + L1_Mus2 LINE L1 5587 5796 -770 2 731 35471 35 1 0 chr17 19240754 19246598 -76026053 + L1Md_T LINE L1 1 5589 -297 2 731 8956 7 0 0 chr17 19246598 19247594 -76025057 + L1Md_T LINE L1 5590 6585 0 2 731 216 164 0 0 chr17 19247597 19247629 -76025022 + A-rich Low_complexity Low_complexity 1 32 0 2 731 5125 108 2 31 chr17 19247629 19248455 -76024196 + L1_Mus2 LINE L1 5783 6566 0 2 731 2094 240 23 8 chr17 19248459 19248980 -76023671 - Lx4A LINE L1 -198 6860 6332 2 731 5259 194 56 13 chr17 19248977 19249557 -76023094 + L1_Mur2 LINE L1 1459 2061 -3816 2 731 585 28 0 0 chr17 19249557 19249628 -76023023 + (CA)n Simple_repeat Simple_repeat 1 71 0 2 731 5259 194 56 13 chr17 19249628 19249751 -76022900 + L1_Mur2 LINE L1 2062 2211 -3666 2 731 791 39 10 0 chr17 19249751 19249854 -76022797 + (GAAA)n Simple_repeat Simple_repeat 3 106 0 2 731 5259 194 56 13 chr17 19249854 19250462 -76022189 + L1_Mur2 LINE L1 2212 2827 -3050 2 731 355 228 10 0 chr17 19250454 19250555 -76022096 + L1_Mur3 LINE L1 5180 5281 -599 2 731 1629 121 60 8 chr17 19250555 19250822 -76021829 - L1Md_F2 LINE L1 -10 6572 6292 2 731 3759 95 16 0 chr17 19250822 19251414 -76021237 + L1_Mur2 LINE L1 4758 5405 -472 2 731 22 0 0 0 chr17 19251855 19251877 -76020774 + AT_rich Low_complexity Low_complexity 1 22 0 2 731 22 0 0 0 chr17 19253013 19253035 -76019616 + AT_rich Low_complexity Low_complexity 1 22 0 2 731 407 138 49 12 chr17 19253091 19253172 -76019479 + ORR1B1 LTR MaLR 34 117 -277 2 731 962 313 39 67 chr17 19253201 19254067 -76018584 + MYSERV6-int LTR ERVK 2055 2896 -6063 2 731 622 284 23 19 chr17 19254074 19254336 -76018315 + MYSERV6-int LTR ERVK 4123 4385 -4574 2 731 1709 55 0 0 chr17 19254709 19254928 -76017723 - L1Md_A LINE L1 0 6582 6364 2 731 2944 70 10 0 chr17 19255002 19255388 -76017263 - RLTR10 LTR ERVK 0 390 1 2 731 857 269 5 20 chr17 19255536 19255737 -76016914 + ORR1A4 LTR MaLR 1 198 -131 2 731 12751 56 2 1 chr17 19255740 19258038 -76014613 - L1Md_F3 LINE L1 -20 6564 4266 2 731 428 39 0 0 chr17 19258038 19258090 -76014561 - L1Md_F3 LINE L1 -1922 3961 3910 2 731 270 239 15 0 chr17 19258090 19258157 -76014494 + ORR1A4 LTR MaLR 260 327 0 2 731 2630 240 51 33 chr17 19258158 19258881 -76013770 + ORR1A4-int LTR MaLR 2 737 -1226 2 731 865 238 52 0 chr17 19258754 19258964 -76013687 + MT2B LTR ERVL 36 256 -345 2 731 1501 234 63 11 chr17 19258972 19259413 -76013238 + ORR1A4-int LTR MaLR 719 1182 -781 2 731 647 272 28 0 chr17 19259417 19259630 -76013021 - L1_Mur2 LINE L1 -1456 4421 4203 2 731 3812 204 63 31 chr17 19259625 19260087 -76012564 + L1_Mur1 LINE L1 3788 4239 -1647 2 731 3763 118 136 103 chr17 19260087 19260945 -76011706 + RMER17D LTR ERVK 1 887 -2 2 731 3812 204 63 31 chr17 19260945 19261357 -76011294 + L1_Mur1 LINE L1 4240 4673 -1213 2 731 495 33 0 0 chr17 19261357 19261418 -76011233 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 731 3812 204 63 31 chr17 19261418 19261588 -76011063 + L1_Mur1 LINE L1 4674 4860 -1026 2 731 897 15 0 44 chr17 19261588 19261725 -76010926 + (GAGAA)n Simple_repeat Simple_repeat 2 132 0 2 731 498 33 0 0 chr17 19261726 19261786 -76010865 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 2 731 3812 204 63 31 chr17 19261786 19261808 -76010843 + L1_Mur1 LINE L1 4861 4888 -998 2 731 898 198 10 15 chr17 19261808 19262008 -76010643 + Lx3A LINE L1 6783 6981 0 2 731 545 105 12 0 chr17 19262008 19262094 -76010557 + (GA)n Simple_repeat Simple_repeat 1 87 0 2 731 462 193 93 29 chr17 19262094 19262200 -76010451 + L1_Mur2 LINE L1 4551 4666 -1211 2 731 351 60 0 0 chr17 19262200 19262250 -76010401 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 731 462 193 93 29 chr17 19262250 19262282 -76010369 + L1_Mur2 LINE L1 4667 4698 -1179 2 731 21 36 0 0 chr17 19262300 19262328 -76010323 + AT_rich Low_complexity Low_complexity 1 28 0 2 731 921 122 7 20 chr17 19262397 19262554 -76010097 - RLTR22_Mur LTR ERVK -884 924 709 2 731 261 255 19 10 chr17 19262554 19262657 -76009994 + L1VL1 LINE L1 188 291 -6131 2 731 411 266 0 0 chr17 19262656 19262750 -76009901 + L1Md_A LINE L1 536 629 -5987 2 731 32977 63 1 9 chr17 19262748 19267426 -76005225 + L1Md_A LINE L1 928 5556 -327 2 731 3614 170 52 13 chr17 19267426 19267456 -76005195 - RLTR22_Mur LTR ERVK -1103 745 718 2 91 7750 63 3 4 chr17 19267456 19268450 -76004201 + L1Md_F2 LINE L1 5587 6579 -3 2 732 3614 170 52 13 chr17 19268450 19269135 -76003516 - RLTR22_Mur LTR ERVK -1131 717 2 2 732 21 0 0 0 chr17 19269603 19269624 -76003027 + AT_rich Low_complexity Low_complexity 1 21 0 2 732 32 43 0 0 chr17 19269846 19269892 -76002759 + AT_rich Low_complexity Low_complexity 1 46 0 2 732 25 31 0 0 chr17 19270041 19270073 -76002578 + AT_rich Low_complexity Low_complexity 1 32 0 2 732 1023 129 0 0 chr17 19270170 19270317 -76002334 - B1_Mus1 SINE Alu 0 148 2 2 732 230 252 69 9 chr17 19270385 19270501 -76002150 - Lx9 LINE L1 0 7644 7522 2 732 204 97 0 0 chr17 19270641 19270672 -76001979 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 732 358 86 60 36 chr17 19271477 19271561 -76001090 - L1Md_F3 LINE L1 -3 6581 6496 2 732 3227 50 2 0 chr17 19271561 19272022 -76000629 + L1Md_F3 LINE L1 5527 5988 -596 2 732 416 295 61 15 chr17 19272040 19272236 -76000415 + MYSERV6-int LTR ERVK 1631 1835 -7124 2 732 1144 248 21 64 chr17 19272403 19272731 -75999920 + ORR1A2 LTR MaLR 6 319 -8 2 732 886 337 56 72 chr17 19272842 19273950 -75998701 + MYSERV6-int LTR ERVK 1327 2416 -6543 2 732 628 103 0 56 chr17 19273951 19274095 -75998556 + A-rich Low_complexity Low_complexity 1 136 0 2 732 739 286 58 18 chr17 19274149 19274544 -75998107 + MYSERV6-int LTR ERVK 2490 2900 -6059 2 732 727 305 11 4 chr17 19274547 19274810 -75997841 + MurERV4-int LTR ERVK 4677 4941 -319 2 732 30 27 0 0 chr17 19274971 19275008 -75997643 + AT_rich Low_complexity Low_complexity 1 37 0 2 732 1602 66 0 0 chr17 19275148 19275359 -75997292 - L1Md_T LINE L1 0 6582 6372 2 732 378 335 52 55 chr17 19275588 19275733 -75996918 + MYSERV-int LTR ERVK 4789 4945 -1605 2 732 279 0 0 0 chr17 19275733 19275764 -75996887 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 732 378 335 52 55 chr17 19275764 19275909 -75996742 + MYSERV-int LTR ERVK 4946 5078 -1472 2 732 341 283 111 77 chr17 19275920 19276127 -75996524 + RMER4A LTR ERVK 238 451 -15 3 732 210 37 0 0 chr17 19276348 19276375 -75996276 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 732 299 229 21 10 chr17 19276688 19276785 -75995866 + MYSERV6-int LTR ERVK 1938 2035 -3487 2 732 1005 281 62 52 chr17 19276945 19277541 -75995110 + MYSERV6-int LTR ERVK 8092 8693 -266 3 732 415 244 57 28 chr17 19277690 19277867 -75994784 + MYSERV-int LTR ERVK 6369 6550 0 3 732 783 130 8 0 chr17 19278955 19279078 -75993573 + B1_Mus1 SINE Alu 25 148 0 3 732 182 105 0 26 chr17 19279083 19279122 -75993529 + (CAAAAA)n Simple_repeat Simple_repeat 4 41 0 3 732 643 174 0 33 chr17 19281126 19281310 -75991341 + (TG)n Simple_repeat Simple_repeat 1 178 0 3 732 236 250 80 9 chr17 19281339 19281452 -75991199 + Lx9 LINE L1 7522 7642 -2 3 732 22 56 0 0 chr17 19281454 19281490 -75991161 + AT_rich Low_complexity Low_complexity 1 36 0 3 732 21 57 0 0 chr17 19281661 19281696 -75990955 + AT_rich Low_complexity Low_complexity 1 35 0 3 732 309 369 98 7 chr17 19282052 19282244 -75990407 - B3A SINE B2 -5 211 7 3 732 3427 177 38 6 chr17 19282397 19283061 -75989590 + RLTR22_Mur LTR ERVK 3 687 -1161 3 732 1050 144 21 0 chr17 19283161 19283348 -75989303 + RLTR22_Mur LTR ERVK 634 824 -1024 3 732 180 0 0 0 chr17 19283350 19283370 -75989281 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 3 732 276 30 0 0 chr17 19283398 19283431 -75989220 + (TTG)n Simple_repeat Simple_repeat 1 33 0 3 732 234 0 0 0 chr17 19283431 19283457 -75989194 + (TGG)n Simple_repeat Simple_repeat 3 28 0 3 732 189 0 0 0 chr17 19285045 19285066 -75987585 + (TA)n Simple_repeat Simple_repeat 2 22 0 3 732 837 271 149 12 chr17 19286499 19286842 -75985809 + ORR1B1 LTR MaLR 5 394 0 3 732 195 139 0 0 chr17 19286911 19286947 -75985704 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 3 732 1956 333 71 60 chr17 19286947 19287961 -75984690 + ORR1B1-int LTR MaLR 54 1073 -297 3 732 3050 61 8 0 chr17 19287961 19288354 -75984297 - MTA_Mm LTR MaLR 0 396 1 3 732 1956 333 71 60 chr17 19288354 19288642 -75984009 + ORR1B1-int LTR MaLR 1074 1370 0 3 732 957 295 31 21 chr17 19288642 19289030 -75983621 + ORR1B1 LTR MaLR 1 392 -2 3 732 276 227 23 154 chr17 19289555 19289600 -75983051 + MT2B2 LTR ERVL 127 154 -430 3 732 289 343 71 43 chr17 19289600 19289740 -75982911 + B1_Mus1 SINE Alu 4 147 -1 3 732 395 106 15 0 chr17 19289789 19289855 -75982796 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 3 732 257 430 14 46 chr17 19293180 19293526 -75979125 - ORR1D2 LTR MaLR -27 343 9 3 732 246 396 71 20 chr17 19293712 19293908 -75978743 - MTEb LTR MaLR -169 210 5 3 732 700 106 40 24 chr17 19293948 19294074 -75978577 + L1_Mus1 LINE L1 6424 6551 -16 3 732 3855 213 17 8 chr17 19294271 19295114 -75977537 - Lx2 LINE L1 -2 6995 6146 3 732 22 35 0 0 chr17 19295175 19295204 -75977447 + AT_rich Low_complexity Low_complexity 1 29 0 3 732 1015 82 0 15 chr17 19295464 19295601 -75977050 - B1_Mm SINE Alu -12 135 1 3 732 39080 34 1 7 chr17 19295609 19301796 -75970855 - L1Md_A LINE L1 0 6582 440 3 732 594 0 0 0 chr17 19301906 19301972 -75970679 + (TA)n Simple_repeat Simple_repeat 2 67 0 3 732 233 271 27 140 chr17 19302627 19302777 -75969874 + ORR1C2 LTR MaLR 82 214 -170 3 732 1719 208 27 3 chr17 19302929 19303387 -75969264 - Lx2 LINE L1 -989 5984 5518 3 732 11633 158 7 2 chr17 19303385 19305680 -75966971 - L1_Mus3 LINE L1 -544 6094 3789 3 732 1041 203 30 4 chr17 19305649 19305886 -75966765 - L1_Mur1 LINE L1 -333 5553 5311 3 732 4703 204 24 54 chr17 19305882 19306186 -75966465 - L1_Mur1 LINE L1 -892 4994 4745 3 732 246 32 0 0 chr17 19306186 19306217 -75966434 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 3 732 4703 204 24 54 chr17 19306217 19307163 -75965488 - L1_Mur1 LINE L1 -1142 4744 3784 3 732 1056 223 158 6 chr17 19307159 19307520 -75965131 + L1_Mur2 LINE L1 4210 4625 -1252 3 732 28 61 0 0 chr17 19307822 19307871 -75964780 + AT_rich Low_complexity Low_complexity 1 49 0 3 732 1578 222 6 0 chr17 19307931 19308246 -75964405 - ORR1A3 LTR MaLR -9 317 1 3 732 4966 219 27 6 chr17 19308246 19309390 -75963261 - ORR1A3-int LTR MaLR 0 1963 796 3 732 612 176 0 0 chr17 19309461 19309563 -75963088 - MT2B LTR ERVL -345 256 155 3 732 7675 64 8 2 chr17 19309568 19310752 -75961899 - L1Md_F2 LINE L1 -13 6569 5379 3 732 2532 222 82 52 chr17 19310752 19311449 -75961202 - ORR1A3-int LTR MaLR -1244 719 2 3 732 1417 251 12 3 chr17 19311450 19311774 -75960877 - ORR1A3 LTR MaLR 0 327 1 3 732 21 100 0 0 chr17 19313992 19314062 -75958589 + AT_rich Low_complexity Low_complexity 1 70 0 3 732 999 232 143 7 chr17 19314088 19314388 -75958263 + Lx4A LINE L1 6716 7056 -2 3 732 628 321 61 39 chr17 19315041 19315450 -75957201 + Lx9 LINE L1 6929 7346 -298 3 732 1744 217 9 24 chr17 19315769 19315796 -75956855 - L1_Mur2 LINE L1 -499 5378 5352 3 732 4748 52 20 8 chr17 19315796 19316394 -75956257 - L1Md_F2 LINE L1 -12 6570 5966 3 732 1744 217 9 24 chr17 19316394 19316819 -75955832 - L1_Mur2 LINE L1 -526 5351 4934 3 732 667 241 12 17 chr17 19316818 19316991 -75955660 + Lx4A LINE L1 6834 7005 -53 3 732 330 274 0 0 chr17 19317080 19317164 -75955487 + (TATG)n Simple_repeat Simple_repeat 3 86 0 3 732 218 0 94 0 chr17 19317266 19317298 -75955353 + (CTTAT)n Simple_repeat Simple_repeat 3 37 0 3 732 402 59 0 0 chr17 19317311 19317362 -75955289 - LTRIS4 LTR ERV1 -456 51 1 3 732 238 267 57 70 chr17 19318693 19318850 -75953801 + L1M2 LINE L1 5132 5286 -857 3 732 308 306 38 55 chr17 19319192 19319375 -75953276 + Lx7 LINE L1 5619 5798 -1898 3 732 396 0 0 0 chr17 19319645 19319689 -75952962 + (CAAAA)n Simple_repeat Simple_repeat 3 46 0 3 732 421 248 1 4 chr17 19319802 19319916 -75952735 + Lx4A LINE L1 5689 5821 -523 3 732 3438 144 16 8 chr17 19319910 19320532 -75952119 + Lx3_Mus LINE L1 5292 5915 -1094 3 732 4619 175 37 18 chr17 19320541 19321489 -75951162 + Lx3_Mus LINE L1 6036 7001 -8 3 732 2885 262 27 5 chr17 19321515 19322293 -75950358 + Lx4A LINE L1 5783 6577 -481 3 732 3528 274 70 53 chr17 19322312 19324235 -75948416 + L1_Mur2 LINE L1 1341 3296 -2581 3 732 237 114 0 0 chr17 19324332 19324367 -75948284 + ORR1A3 LTR MaLR 3 37 -290 3 732 562 165 0 0 chr17 19324372 19324463 -75948188 + ORR1A3 LTR MaLR 193 283 -43 3 732 352 119 51 0 chr17 19324465 19324524 -75948127 - Lx2A LINE L1 -1102 5906 5845 3 732 1275 213 18 42 chr17 19324525 19324858 -75947793 + ORR1A2 LTR MaLR 1 325 -2 3 732 2653 204 19 8 chr17 19324882 19325416 -75947235 + ORR1A2-int LTR MaLR 16 555 -1408 3 732 579 218 29 64 chr17 19325383 19325515 -75947136 + MT2B LTR ERVL 128 220 -381 3 732 210 317 97 8 chr17 19325515 19325639 -75947012 + B1F1 SINE Alu 3 137 -12 3 732 3102 123 6 0 chr17 19325639 19326110 -75946541 - L1_Mm LINE L1 -236 5647 5174 3 732 1193 65 0 0 chr17 19326106 19326261 -75946390 + L1_Mus1 LINE L1 5726 5880 -687 3 732 3544 92 4 0 chr17 19326270 19326760 -75945891 + L1_Mus1 LINE L1 6076 6567 0 3 732 408 40 0 0 chr17 19326887 19326937 -75945714 + (TA)n Simple_repeat Simple_repeat 1 50 0 3 732 450 119 0 0 chr17 19326937 19327021 -75945630 + (GA)n Simple_repeat Simple_repeat 1 84 0 3 732 1110 234 7 30 chr17 19327023 19327319 -75945332 + ORR1A2-int LTR MaLR 846 1134 -829 3 732 385 354 82 11 chr17 19327792 19327975 -75944676 - MTE2a LTR MaLR -13 366 171 3 732 4859 170 26 3 chr17 19328379 19329334 -75943317 - Lx3_Mus LINE L1 0 7009 6033 3 732 305 314 62 16 chr17 19329366 19329560 -75943091 + MYSERV6-int LTR ERVK 1641 1843 -7116 3 732 21 0 0 0 chr17 19329638 19329659 -75942992 + AT_rich Low_complexity Low_complexity 1 21 0 3 732 267 212 42 0 chr17 19329717 19329792 -75942859 + ORR1A2 LTR MaLR 5 92 -275 3 732 1067 301 50 42 chr17 19329878 19330665 -75941986 + MYSERV6-int LTR ERVK 2104 2896 -6063 3 732 772 270 15 11 chr17 19330672 19330934 -75941717 + MYSERV6-int LTR ERVK 4123 4385 -4574 3 732 391 339 65 53 chr17 19331559 19331805 -75940846 + MYSERV6-int LTR ERVK 4843 5091 -1459 3 732 274 269 117 42 chr17 19331831 19331951 -75940700 + RMER4A LTR ERVK 252 380 -86 3 732 3031 128 16 0 chr17 19332166 19332659 -75939992 + L1_Mus3 LINE L1 5705 6187 -451 3 732 1227 187 0 47 chr17 19332659 19332901 -75939750 + RMER17A2 LTR ERVK 1 222 -684 3 732 1347 141 28 126 chr17 19332949 19333306 -75939345 - RLTRETN_Mm LTR ERVK 0 322 1 3 732 506 53 25 74 chr17 19333308 19333389 -75939262 - ETnERV2-int LTR ERVK -3 7403 7327 3 732 396 230 335 7 chr17 19333392 19333664 -75938987 - RLTR13D6 LTR ERVK -371 531 171 3 732 6301 164 20 40 chr17 19333665 19334771 -75937880 - ETnERV2-int LTR ERVK -196 7210 6127 3 732 5378 136 22 33 chr17 19334740 19336513 -75936138 - MMETn-int LTR ERVK -2004 3402 1730 3 732 4054 135 5 102 chr17 19336545 19337386 -75935265 - MMETn-int LTR ERVK -4083 761 3 3 732 1279 160 22 121 chr17 19337388 19337743 -75934908 - RLTRETN_Mm LTR ERVK 0 322 3 3 732 493 204 6 6 chr17 19341261 19341429 -75931222 + (TG)n Simple_repeat Simple_repeat 1 168 0 3 732 237 221 87 17 chr17 19341458 19341573 -75931078 + Lx9 LINE L1 7522 7644 0 3 732 23 0 0 0 chr17 19341595 19341618 -75931033 + AT_rich Low_complexity Low_complexity 1 23 0 3 732 811 181 8 0 chr17 19341640 19341773 -75930878 + B1_Mus1 SINE Alu 2 135 -13 3 732 186 43 0 0 chr17 19341773 19341796 -75930855 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 3 732 31 58 0 14 chr17 19341945 19341968 -75930683 + AT_rich Low_complexity Low_complexity 1 23 0 3 732 998 136 0 0 chr17 19341968 19342115 -75930536 - B1_Mm SINE Alu 0 147 1 3 732 31 58 0 14 chr17 19342115 19342161 -75930490 + AT_rich Low_complexity Low_complexity 1 46 0 3 732 24 0 0 0 chr17 19342746 19342770 -75929881 + AT_rich Low_complexity Low_complexity 1 24 0 3 732 1616 191 6 6 chr17 19342872 19343183 -75929468 + RLTR22_Mur LTR ERVK 1 311 -1537 3 732 9790 122 10 7 chr17 19343184 19345856 -75926795 - L1VL1 LINE L1 -1030 2884 217 3 732 1164 272 9 0 chr17 19346346 19346669 -75925982 + ORR1A3 LTR MaLR 1 326 0 3 732 3452 246 43 90 chr17 19346670 19347871 -75924780 + ORR1A3-int LTR MaLR 2 1146 -817 3 732 432 316 38 29 chr17 19348275 19348513 -75924138 - IAP-d-int LTR ERVK -6031 511 272 3 732 514 269 188 50 chr17 19349017 19349256 -75923395 - RLTR10A LTR ERVK 0 411 140 3 732 12508 176 22 13 chr17 19349307 19353053 -75919598 - L1VL2 LINE L1 -1829 4057 317 3 732 232 412 70 28 chr17 19353053 19353525 -75919126 - MTE-int LTR MaLR -515 1065 574 3 732 32 0 0 0 chr17 19353532 19353564 -75919087 + AT_rich Low_complexity Low_complexity 1 32 0 3 732 206 0 69 0 chr17 19353646 19353675 -75918976 + (TTATA)n Simple_repeat Simple_repeat 2 32 0 3 732 851 75 0 15 chr17 19353716 19353852 -75918799 - L1Md_F2 LINE L1 0 6582 6449 3 732 357 235 8 15 chr17 19353869 19354003 -75918648 + T-rich Low_complexity Low_complexity 2 134 0 3 732 256 293 88 16 chr17 19354006 19354131 -75918520 - RMER15 LTR ERVL -105 470 337 3 732 2512 131 10 2 chr17 19354387 19354784 -75917867 - MTB LTR MaLR 0 400 1 3 732 1606 307 797 17 chr17 19355145 19355255 -75917396 - RMER1A Other Other -1 1065 859 3 732 935 100 7 0 chr17 19355255 19355405 -75917246 + (GAA)n Simple_repeat Simple_repeat 1 151 0 3 732 1606 354 65 28 chr17 19355405 19356224 -75916427 - RMER1A Other Other -172 858 7 3 732 186 43 0 0 chr17 19356245 19356268 -75916383 + (T)n Simple_repeat Simple_repeat 1 23 0 4 732 557 329 14 27 chr17 19356413 19356632 -75916019 - Lx5 LINE L1 -15 7035 6820 4 732 220 374 9 36 chr17 19356960 19357071 -75915580 + B4 SINE B4 6 113 -179 4 732 2361 102 80 90 chr17 19357559 19358046 -75914605 + RLTR45 LTR ERVK 1 482 0 4 732 309 335 65 14 chr17 19358310 19358525 -75914126 + L1M2 LINE L1 4836 5061 -1082 4 732 246 291 40 60 chr17 19358973 19359123 -75913528 + Lx7 LINE L1 5619 5765 -1931 4 732 5137 123 16 5 chr17 19359171 19359814 -75912837 + RLTR13D1 LTR ERVK 3 648 -158 4 732 405 0 0 0 chr17 19359814 19359859 -75912792 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 732 5137 123 16 5 chr17 19359859 19360010 -75912641 + RLTR13D1 LTR ERVK 649 806 0 4 732 31 0 0 0 chr17 19360768 19360799 -75911852 + AT_rich Low_complexity Low_complexity 1 31 0 4 732 258 222 0 0 chr17 19360945 19360990 -75911661 + Lx4B LINE L1 6557 6601 -457 4 732 403 249 63 26 chr17 19361004 19361257 -75911394 + L1_Mur2 LINE L1 1004 1343 -6385 4 732 1776 277 17 61 chr17 19361254 19362072 -75910579 + L1_Mur2 LINE L1 1665 2446 -3431 4 732 1745 217 141 102 chr17 19362068 19362792 -75909859 - L1_Mur2 LINE L1 -492 5385 4634 4 732 683 286 49 43 chr17 19362846 19363245 -75909406 + RLTR45 LTR ERVK 29 482 0 4 732 1384 264 72 35 chr17 19363245 19363760 -75908891 + RLTR45-int LTR ERVK 1 534 -6710 4 732 560 234 0 0 chr17 19364641 19364765 -75907886 + RLTR45-int LTR ERVK 569 692 -6552 4 732 497 123 9 0 chr17 19364794 19364900 -75907751 + (CAAA)n Simple_repeat Simple_repeat 2 108 0 4 732 568 227 0 0 chr17 19365217 19365336 -75907315 + RLTR45-int LTR ERVK 693 811 -6433 4 732 280 308 0 111 chr17 19365577 19365712 -75906939 + RLTR45-int LTR ERVK 912 1031 -6213 4 732 3176 325 67 50 chr17 19366033 19369028 -75903623 + RNERVK23-int LTR ERVK 2661 5707 -2510 4 732 18890 162 25 27 chr17 19369442 19373802 -75898849 + ETnERV2-int LTR ERVK 2406 7299 -107 4 732 1422 135 33 77 chr17 19373803 19374140 -75898511 + RLTRETN_Mm LTR ERVK 1 322 0 4 732 2908 115 2 7 chr17 19374140 19374577 -75898074 - RLTR13D5 LTR ERVK -402 621 187 4 732 225 61 0 29 chr17 19374566 19374600 -75898051 - RLTR13D5 LTR ERVK -990 33 1 4 732 309 125 7 0 chr17 19374603 19374659 -75897992 + L1_Mur1 LINE L1 2718 2776 -3110 4 732 2741 259 14 15 chr17 19374652 19375321 -75897330 + Lx2A1 LINE L1 6327 6994 -14 4 732 266 204 0 0 chr17 19375321 19375370 -75897281 + ORR1A2 LTR MaLR 275 323 -3 4 732 1084 93 0 0 chr17 19375371 19375511 -75897140 + B1_Mm SINE Alu 2 141 -6 4 732 250 45 0 43 chr17 19375512 19375558 -75897093 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 4 732 5721 202 22 15 chr17 19375573 19376901 -75895750 + ORR1A2-int LTR MaLR 1 1963 0 4 732 1624 170 48 13 chr17 19376901 19377217 -75895434 + ORR1A2 LTR MaLR 1 327 0 4 732 4734 264 35 30 chr17 19377221 19379023 -75893628 + Lx4A LINE L1 3383 5194 -683 4 732 1244 74 11 0 chr17 19379025 19379201 -75893450 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 4 732 459 0 0 0 chr17 19379204 19379255 -75893396 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 4 732 2715 270 33 4 chr17 19379259 19379954 -75892697 - Lx4A LINE L1 -10 7048 6334 4 732 4188 203 60 5 chr17 19379961 19380539 -75892112 + L1_Mur2 LINE L1 1467 2063 -3814 4 732 435 119 0 0 chr17 19380539 19380606 -75892045 + (CA)n Simple_repeat Simple_repeat 1 67 0 4 732 4188 203 60 5 chr17 19380606 19381046 -75891605 + L1_Mur2 LINE L1 2064 2541 -3336 4 732 1091 134 16 11 chr17 19381046 19381234 -75891417 + RLTR9F LTR ERVK 1 189 -226 4 732 8129 104 4 4 chr17 19381234 19383163 -75889488 - L1Md_A LINE L1 -3584 2299 413 4 732 789 194 0 0 chr17 19383163 19383338 -75889313 + L1_Mur2 LINE L1 3502 3676 -2201 4 732 1108 208 51 4 chr17 19383782 19384057 -75888594 + Lx4A LINE L1 5687 5974 -1084 4 732 1197 206 4 20 chr17 19384059 19384312 -75888339 + Lx4A LINE L1 6346 6594 -464 4 732 269 237 79 0 chr17 19384334 19384410 -75888241 + L1_Mur2 LINE L1 1004 1085 -6001 4 732 1858 302 34 42 chr17 19384447 19385623 -75887028 + L1_Mur2 LINE L1 1212 2377 -3500 4 732 4217 224 9 7 chr17 19385689 19386720 -75885931 - L1_Mur2 LINE L1 -492 5385 4353 4 732 1566 274 9 16 chr17 19386710 19387159 -75885492 + Lx2 LINE L1 5895 6340 -657 4 732 1536 209 9 0 chr17 19387170 19387505 -75885146 - Lx2 LINE L1 0 6997 6660 4 732 698 128 7 57 chr17 19387507 19387648 -75885003 + MusHAL1 LINE L1 1435 1568 -1144 4 732 573 259 13 0 chr17 19387645 19387803 -75884848 + Lx2 LINE L1 6332 6491 -509 4 732 6135 238 22 49 chr17 19387804 19389545 -75883106 + ORR1A2-int LTR MaLR 99 1792 0 4 732 425 231 0 0 chr17 19389545 19389636 -75883015 + ORR1A2 LTR MaLR 1 91 -235 4 732 4168 209 27 14 chr17 19389652 19391055 -75881596 - Lx LINE L1 -10 6556 5104 4 732 1067 187 82 27 chr17 19391061 19391281 -75881370 + ORR1A2 LTR MaLR 96 327 0 4 732 4488 268 40 17 chr17 19391285 19393049 -75879602 + L1_Mur2 LINE L1 3383 5187 -690 4 732 2523 268 16 16 chr17 19393101 19393795 -75878856 - Lx4A LINE L1 -7 7051 6358 4 732 2070 220 64 41 chr17 19393819 19394572 -75878079 + L1_Mur2 LINE L1 1463 2232 -3645 4 732 977 186 80 12 chr17 19394540 19394791 -75877860 + L1_Mur2 LINE L1 2557 2824 -3053 4 732 2458 225 69 7 chr17 19394812 19395393 -75877258 + RLTR17 LTR ERVK 3 619 -73 4 91 31170 96 4 3 chr17 19395606 19401112 -75871539 + L1Md_F2 LINE L1 101 5588 -298 4 733 7678 55 20 3 chr17 19401113 19402092 -75870559 + L1Md_F2 LINE L1 5590 6585 0 4 733 271 83 0 20 chr17 19402250 19402299 -75870352 - Lx2A LINE L1 -25 6983 6936 4 733 4734 198 32 6 chr17 19402293 19403502 -75869149 - Lx2A LINE L1 -488 6520 5290 4 733 450 108 0 0 chr17 19403785 19403859 -75868792 + (CA)n Simple_repeat Simple_repeat 1 74 0 4 733 333 300 115 39 chr17 19404411 19404567 -75868084 - MTE2b LTR MaLR -7 372 205 4 733 511 290 61 18 chr17 19404963 19405191 -75867460 + MYSERV6-int LTR ERVK 1598 1835 -7124 4 733 1207 272 29 3 chr17 19405361 19405667 -75866984 + ORR1A1 LTR MaLR 25 338 -8 4 733 927 341 40 65 chr17 19405761 19406899 -75865752 + MYSERV6-int LTR ERVK 1307 2968 -2292 4 733 8147 46 0 1 chr17 19407256 19408250 -75864401 - L1Md_A LINE L1 -3 6579 5587 4 733 5219 50 1 0 chr17 19408256 19408915 -75863736 + L1_Mm LINE L1 3673 4332 -1551 4 733 710 302 12 4 chr17 19409007 19409266 -75863385 + MYSERV6-int LTR ERVK 4677 4937 -323 4 733 345 273 101 85 chr17 19409893 19410081 -75862570 + MYSERV6-int LTR ERVK 4843 5033 -1517 4 733 320 0 25 0 chr17 19410249 19410289 -75862362 + (TC)n Simple_repeat Simple_repeat 1 41 0 4 733 237 254 0 16 chr17 19410289 19410353 -75862298 + RMER4A LTR ERVK 377 439 -27 4 733 880 148 0 0 chr17 19410856 19410991 -75861660 - B1_Mus2 SINE Alu -12 135 1 4 733 6804 113 3 17 chr17 19411121 19412441 -75860210 - L1VL1 LINE L1 -3562 2321 1020 4 733 6798 106 11 4 chr17 19412439 19413477 -75859174 + L1_Mus1 LINE L1 5527 6567 0 4 733 1077 279 76 40 chr17 19413535 19414226 -75858425 + MYSERV6-int LTR ERVK 8162 8693 -266 4 733 263 212 0 12 chr17 19414839 19414920 -75857731 + GA-rich Low_complexity Low_complexity 2 81 0 4 733 360 0 0 0 chr17 19415066 19415106 -75857545 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 733 208 102 0 39 chr17 19415298 19415349 -75857302 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 4 733 431 181 66 9 chr17 19415545 19415651 -75857000 + MYSERV-int LTR ERVK 6369 6480 -70 4 733 393 22 0 0 chr17 19418874 19418920 -75853731 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 733 260 319 0 0 chr17 19418952 19419043 -75853608 + (TG)n Simple_repeat Simple_repeat 2 92 0 4 733 236 261 51 17 chr17 19419067 19419184 -75853467 + Lx9 LINE L1 7522 7642 -2 4 733 22 56 0 0 chr17 19419395 19419431 -75853220 + AT_rich Low_complexity Low_complexity 1 36 0 4 733 22 70 0 0 chr17 19419542 19419585 -75853066 + AT_rich Low_complexity Low_complexity 1 43 0 4 733 267 349 99 18 chr17 19419887 19419998 -75852653 - B3 SINE B2 -90 126 7 4 733 550 258 8 8 chr17 19420150 19420279 -75852372 + RLTR22_Mur LTR ERVK 1 129 -1719 4 733 30 0 0 0 chr17 19420500 19420530 -75852121 + AT_rich Low_complexity Low_complexity 1 30 0 4 733 1060 61 0 103 chr17 19420530 19420695 -75851956 - B1_Mus1 SINE Alu 0 148 1 4 733 792 265 173 12 chr17 19421816 19422145 -75850506 + ORR1B1 LTR MaLR 13 394 0 4 733 207 100 0 0 chr17 19422219 19422249 -75850402 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 4 733 2133 326 96 33 chr17 19422252 19423492 -75849159 + ORR1B1-int LTR MaLR 53 1370 0 4 733 1188 280 16 5 chr17 19423492 19423880 -75848771 + ORR1B1 LTR MaLR 1 392 -2 4 733 236 356 0 65 chr17 19424444 19424537 -75848114 + B1_Mus1 SINE Alu 4 90 -58 4 733 229 302 10 0 chr17 19424610 19424706 -75847945 + (CATA)n Simple_repeat Simple_repeat 2 98 0 4 733 27 62 0 0 chr17 19425162 19425210 -75847441 + AT_rich Low_complexity Low_complexity 1 48 0 4 733 1408 34 45 0 chr17 19426902 19427078 -75845573 + B2_Mm1a SINE B2 4 187 -6 4 733 271 429 18 50 chr17 19428075 19428455 -75844196 - ORR1D2 LTR MaLR -2 368 1 4 733 1262 112 82 73 chr17 19428712 19428986 -75843665 - L1Md_F2 LINE L1 -7 6629 6317 4 733 1357 67 31 10 chr17 19428985 19429180 -75843471 - L1Md_F2 LINE L1 -457 6125 5927 4 733 1061 83 14 0 chr17 19429412 19429556 -75843095 - B1_Mus2 SINE Alu 0 147 2 4 733 3952 203 21 8 chr17 19429664 19430502 -75842149 - Lx2 LINE L1 -3 6994 6146 4 733 294 324 27 61 chr17 19431612 19431760 -75840891 + ORR1C2 LTR MaLR 83 225 -159 4 733 1494 228 31 13 chr17 19431904 19432260 -75840391 - Lx3B LINE L1 -992 5981 5619 4 733 342 0 0 0 chr17 19432260 19432298 -75840353 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 733 1494 208 50 25 chr17 19432298 19432401 -75840250 - Lx3B LINE L1 -258 5628 5518 4 733 8376 178 81 3 chr17 19432404 19434547 -75838104 - L1_Mus3 LINE L1 -532 6106 3783 4 733 973 201 25 0 chr17 19434543 19434747 -75837904 - Lx3B LINE L1 -361 5525 5317 4 733 4369 206 36 53 chr17 19434746 19434929 -75837722 - Lx3B LINE L1 -888 4998 4860 4 733 1275 89 0 0 chr17 19434929 19435108 -75837543 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 4 733 4369 206 36 53 chr17 19435108 19435220 -75837431 - Lx3B LINE L1 -1027 4859 4733 4 733 207 0 0 0 chr17 19435220 19435243 -75837408 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 4 733 4369 206 36 53 chr17 19435243 19436184 -75836467 - Lx3B LINE L1 -1154 4732 3782 4 733 1471 234 27 2 chr17 19436180 19436583 -75836068 + L1_Mur2 LINE L1 4210 4622 -1255 4 733 264 59 0 0 chr17 19436679 19436713 -75835938 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 733 26 30 0 0 chr17 19436884 19436917 -75835734 + AT_rich Low_complexity Low_complexity 1 33 0 4 733 27 29 0 0 chr17 19436951 19436985 -75835666 + AT_rich Low_complexity Low_complexity 1 34 0 4 733 1349 214 54 3 chr17 19437010 19437305 -75835346 - ORR1A3 LTR MaLR -9 317 8 4 733 7273 225 30 61 chr17 19437318 19439337 -75833314 - ORR1A3-int LTR MaLR -6 1957 2 4 733 1290 222 33 60 chr17 19439338 19439673 -75832978 - ORR1A3 LTR MaLR 0 326 1 4 733 22 0 0 0 chr17 19439678 19439700 -75832951 + AT_rich Low_complexity Low_complexity 1 22 0 4 733 23 33 0 0 chr17 19441770 19441800 -75830851 + AT_rich Low_complexity Low_complexity 1 30 0 4 733 1098 95 7 0 chr17 19441809 19441956 -75830695 + B1_Mus1 SINE Alu 1 148 0 4 733 21 0 0 0 chr17 19442233 19442254 -75830397 + AT_rich Low_complexity Low_complexity 1 21 0 4 733 24 32 0 0 chr17 19442353 19442384 -75830267 + AT_rich Low_complexity Low_complexity 1 31 0 4 733 24 91 0 0 chr17 19442581 19442647 -75830004 + AT_rich Low_complexity Low_complexity 1 66 0 4 733 4212 70 15 16 chr17 19442732 19443332 -75829319 - RLTR13C2 LTR ERVK -209 905 1 4 733 382 255 39 95 chr17 19443333 19443381 -75829270 - Lx4B LINE L1 -533 6517 6470 4 733 4540 47 5 9 chr17 19443381 19443943 -75828708 - L1Md_F2 LINE L1 0 6582 6023 4 733 382 248 20 89 chr17 19443943 19444063 -75828588 - Lx4B LINE L1 -565 6493 6379 4 733 930 273 60 16 chr17 19444343 19444807 -75827844 - Lx4A LINE L1 -522 6528 6052 4 733 1968 214 93 6 chr17 19444808 19445302 -75827349 + Lx4A LINE L1 6520 7056 -2 4 733 621 297 68 53 chr17 19445564 19445977 -75826674 + Lx9 LINE L1 6943 7361 -283 4 733 2879 222 17 17 chr17 19446293 19447050 -75825601 - L1_Mur2 LINE L1 -499 5378 4622 5 733 3086 274 34 1 chr17 19447084 19447936 -75824715 + Lx4A LINE L1 6129 7008 -50 5 733 225 230 0 0 chr17 19448043 19448117 -75824534 + (TATG)n Simple_repeat Simple_repeat 2 75 0 5 733 31 58 0 0 chr17 19448404 19448456 -75824195 + AT_rich Low_complexity Low_complexity 1 52 0 5 733 357 208 37 28 chr17 19449251 19449360 -75823291 + Lx2A LINE L1 6885 6994 -14 5 733 249 143 0 125 chr17 19449360 19449388 -75823263 + ORR1A3 LTR MaLR 275 300 -26 5 733 2652 44 120 0 chr17 19449388 19449755 -75822896 - IAPLTR2a LTR ERVK 0 411 1 5 733 249 143 0 125 chr17 19449755 19449782 -75822869 + ORR1A3 LTR MaLR 301 323 -3 5 733 907 93 78 0 chr17 19449784 19449913 -75822738 + B1_Mm SINE Alu 3 141 -6 5 733 363 18 0 51 chr17 19449914 19449973 -75822678 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 5 733 5813 203 16 12 chr17 19449988 19451319 -75821332 + ORR1A2-int LTR MaLR 1 1963 0 5 733 1529 181 58 10 chr17 19451319 19451631 -75821020 + ORR1A2 LTR MaLR 1 327 0 5 733 4602 260 57 17 chr17 19451635 19453377 -75819274 + L1_Mur2 LINE L1 3383 5194 -683 5 733 552 68 0 0 chr17 19453379 19453452 -75819199 + (TTTC)n Simple_repeat Simple_repeat 3 75 0 5 733 198 0 0 0 chr17 19453457 19453479 -75819172 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 5 733 2642 268 24 7 chr17 19453483 19454186 -75818465 - Lx4A LINE L1 -10 7048 6334 5 733 5031 206 31 22 chr17 19454193 19454795 -75817856 + L1_Mur2 LINE L1 1467 2083 -3794 5 733 288 0 0 0 chr17 19454795 19454827 -75817824 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 733 5031 206 31 22 chr17 19454827 19455277 -75817374 + L1_Mur2 LINE L1 2084 2541 -3336 5 733 1949 127 21 166 chr17 19455277 19455758 -75816893 + RLTR9F LTR ERVK 1 411 -4 5 733 5031 206 31 22 chr17 19455758 19455976 -75816675 + L1_Mur2 LINE L1 2542 2749 -3128 5 733 1651 144 93 7 chr17 19455976 19456277 -75816374 + IAPEY3_LTR LTR ERVK 1 327 -5 5 733 4442 137 18 3 chr17 19456282 19457000 -75815651 + IAPEY3-int LTR ERVK 3 731 -6949 5 733 18535 60 5 0 chr17 19456988 19459303 -75813348 + IAPEY3-int LTR ERVK 2362 4687 -2993 5 733 2166 84 132 11 chr17 19459303 19459651 -75813000 + RLTR10 LTR ERVK 1 390 0 5 733 8700 115 57 57 chr17 19459651 19461333 -75811318 + RLTR10-int LTR ERVK 302 1984 -3 5 733 2200 78 132 11 chr17 19461335 19461683 -75810968 + RLTR10 LTR ERVK 1 390 0 5 733 18369 138 20 5 chr17 19461683 19464638 -75808013 + IAPEY3-int LTR ERVK 4682 7680 0 5 733 1688 141 93 3 chr17 19464638 19464938 -75807713 + IAPEY3_LTR LTR ERVK 1 327 -5 5 733 471 182 0 22 chr17 19464938 19465028 -75807623 + L1_Mur2 LINE L1 2741 2828 -3049 5 733 1142 185 62 13 chr17 19465044 19465269 -75807382 + RLTR17 LTR ERVK 1 236 -456 5 733 1193 54 7 0 chr17 19465269 19465416 -75807235 + B1_Mus1 SINE Alu 1 148 0 5 733 570 302 79 82 chr17 19465416 19465482 -75807169 + BGLII_A LTR ERVK 222 291 -154 5 733 678 179 119 0 chr17 19465472 19465606 -75807045 + RLTR17 LTR ERVK 230 379 -313 5 733 431 218 17 0 chr17 19465609 19465708 -75806943 - Lx4A LINE L1 -511 6127 6019 5 733 301 250 19 24 chr17 19465711 19465794 -75806857 + RLTR26 LTR ERVK 1 82 -824 5 733 1347 168 70 1 chr17 19465794 19466147 -75806504 + L1_Mm LINE L1 3269 3682 -2201 5 733 1081 210 56 8 chr17 19466590 19466878 -75805773 + Lx4A LINE L1 5687 5994 -1064 5 733 2998 60 8 3 chr17 19466878 19467264 -75805387 - L1Md_F3 LINE L1 -2 6582 6195 5 733 1060 228 81 33 chr17 19467264 19467303 -75805348 + Lx4A LINE L1 5995 6035 -1023 5 733 2684 57 62 0 chr17 19467303 19467639 -75805012 - IAPEY2_LTR LTR ERVK 0 357 1 5 733 1060 206 95 45 chr17 19467639 19467863 -75804788 + Lx4A LINE L1 6036 6062 -996 5 733 244 291 38 0 chr17 19467862 19467941 -75804710 + L1_Mur2 LINE L1 1004 1085 -6001 5 733 744 94 0 0 chr17 19468023 19468129 -75804522 + (TA)n Simple_repeat Simple_repeat 2 107 0 5 733 1876 305 38 36 chr17 19468131 19469310 -75803341 + L1_Mur2 LINE L1 1266 2446 -3431 5 733 4166 231 9 9 chr17 19469306 19470339 -75802312 - L1_Mur2 LINE L1 -492 5385 4353 5 733 1687 253 13 18 chr17 19470323 19470777 -75801874 + Lx2B LINE L1 5889 6340 -657 5 733 1466 219 9 0 chr17 19470788 19471121 -75801530 - Lx2 LINE L1 0 6997 6662 5 733 680 135 7 57 chr17 19471125 19471266 -75801385 + MusHAL1 LINE L1 1435 1568 -1144 5 733 2409 235 68 31 chr17 19471263 19471908 -75800743 + Lx2B LINE L1 6332 7000 0 5 733 272 160 20 0 chr17 19471916 19471966 -75800685 + ORR1A2 LTR MaLR 292 342 -4 5 733 5831 237 21 45 chr17 19471970 19473807 -75798844 + ORR1A2-int LTR MaLR 1 1792 0 5 733 441 220 0 0 chr17 19473807 19473898 -75798753 + ORR1A2 LTR MaLR 1 91 -236 5 733 348 133 53 133 chr17 19473900 19474021 -75798630 - Lx LINE L1 -17 6637 6536 5 733 4356 192 23 14 chr17 19474021 19475316 -75797335 - Lx LINE L1 -241 6413 5104 5 733 1041 192 82 27 chr17 19475322 19475542 -75797109 + ORR1A2 LTR MaLR 96 327 0 5 733 4544 274 36 11 chr17 19475546 19477307 -75795344 + L1_Mur2 LINE L1 3383 5187 -690 5 733 2682 263 14 9 chr17 19477359 19478057 -75794594 - Lx4A LINE L1 -7 7051 6350 5 733 2125 222 48 28 chr17 19478082 19478787 -75793864 + L1_Mur2 LINE L1 1471 2189 -3688 5 733 1003 170 84 12 chr17 19478800 19479050 -75793601 + L1_Mur2 LINE L1 2557 2824 -3053 5 733 2538 222 66 8 chr17 19479072 19479663 -75792988 + RLTR17 LTR ERVK 1 625 -67 5 733 267 247 0 0 chr17 19479716 19479801 -75792850 + L1_Mur2 LINE L1 5198 5282 -598 5 733 232 157 28 28 chr17 19480018 19480090 -75792561 - Lx2A LINE L1 -13 6995 6924 5 733 4752 199 26 6 chr17 19480073 19481280 -75791371 - Lx2A LINE L1 -488 6520 5290 5 733 438 108 0 0 chr17 19481562 19481636 -75791015 + (CA)n Simple_repeat Simple_repeat 1 74 0 5 733 411 268 123 32 chr17 19482208 19482362 -75790289 - MTE2a LTR MaLR -7 372 205 5 733 421 302 66 18 chr17 19482781 19483007 -75789644 + MYSERV6-int LTR ERVK 1599 1835 -7124 5 733 1085 275 26 66 chr17 19483174 19483521 -75789130 + ORR1A1 LTR MaLR 6 338 -8 5 733 1354 330 71 56 chr17 19483615 19485185 -75787466 + MYSERV6-int LTR ERVK 1307 2900 -6059 5 733 258 250 83 119 chr17 19486390 19486499 -75786152 + RMER4B LTR ERVK 448 552 -33 5 733 14823 55 38 9 chr17 19486561 19488459 -75784192 - RLTR45-int LTR ERVK -229 7015 5064 5 733 14772 55 10 18 chr17 19488451 19490937 -75781714 - RLTR45-int LTR ERVK -3258 3986 1329 5 733 1078 39 0 0 chr17 19491720 19491847 -75780804 - RLTR45-int LTR ERVK -6426 818 692 5 733 5200 68 22 4 chr17 19492202 19492882 -75779769 - RLTR45-int LTR ERVK -6552 692 1 5 733 2663 121 36 76 chr17 19492882 19493384 -75779267 - RLTR45 LTR ERVK 0 482 1 5 733 2116 59 0 14 chr17 19493384 19493675 -75778976 - MTA_Mm-int LTR MaLR -811 287 1 5 733 3013 53 8 18 chr17 19493675 19493776 -75778875 - MTA_Mm LTR MaLR 0 396 302 5 733 1593 210 13 3 chr17 19493776 19494082 -75778569 + RLTR27 LTR ERVK 1 309 0 5 733 3013 53 8 18 chr17 19494082 19494380 -75778271 - MTA_Mm LTR MaLR -95 301 1 5 733 4091 94 5 25 chr17 19494380 19495240 -75777411 - L1VL1 LINE L1 -2053 1645 804 5 733 7062 96 2 5 chr17 19495238 19496285 -75776366 + L1_Mus1 LINE L1 5527 6567 0 5 733 978 284 77 26 chr17 19496534 19497040 -75775611 + MYSERV6-int LTR ERVK 8162 8693 -266 5 733 249 197 0 0 chr17 19497663 19497724 -75774927 + GA-rich Low_complexity Low_complexity 3 63 0 5 733 486 0 0 0 chr17 19497884 19497938 -75774713 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 733 190 73 0 47 chr17 19498111 19498154 -75774497 + (TTTTTG)n Simple_repeat Simple_repeat 3 43 0 5 733 433 185 64 9 chr17 19498360 19498469 -75774182 + MYSERV-int LTR ERVK 6369 6483 -67 5 733 24 0 0 0 chr17 19500424 19500448 -75772203 + AT_rich Low_complexity Low_complexity 1 24 0 1 733 843 61 0 0 chr17 19501667 19501781 -75770870 + (TG)n Simple_repeat Simple_repeat 1 114 0 2 733 276 231 65 11 chr17 19501931 19502023 -75770628 + Lx9 LINE L1 7541 7637 -7 3 733 205 191 0 0 chr17 19502241 19502283 -75770368 + (TA)n Simple_repeat Simple_repeat 1 42 0 4 733 27271 100 13 6 chr17 19503798 19509314 -75763337 - L1Md_F2 LINE L1 -15 6567 837 5 733 811 272 156 12 chr17 19509723 19510050 -75762601 + ORR1B1 LTR MaLR 21 394 0 6 733 2905 289 132 34 chr17 19510051 19510117 -75762534 + ORR1B1-int LTR MaLR 2 57 -1452 6 733 270 0 0 0 chr17 19510117 19510147 -75762504 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 7 733 2905 289 132 34 chr17 19510147 19511454 -75761197 + ORR1B1-int LTR MaLR 58 1509 0 6 733 1189 281 18 5 chr17 19511454 19511841 -75760810 + ORR1B1 LTR MaLR 1 392 -2 6 733 260 219 40 160 chr17 19512368 19512409 -75760242 + MT2B2 LTR ERVL 130 155 -429 8 733 260 371 0 22 chr17 19512409 19512500 -75760151 + B1_Mus2 SINE Alu 1 89 -58 9 733 24 53 0 0 chr17 19512939 19512977 -75759674 + AT_rich Low_complexity Low_complexity 1 38 0 1 733 4398 56 2 2 chr17 19513114 19513670 -75758981 + L1Md_F3 LINE L1 5030 5585 -298 1 733 7819 56 6 3 chr17 19513671 19514664 -75757987 + L1Md_F3 LINE L1 5587 6582 -2 1 733 22 0 0 0 chr17 19514776 19514798 -75757853 + AT_rich Low_complexity Low_complexity 1 22 0 1 733 255 435 53 10 chr17 19518058 19518267 -75754384 - MTE2b LTR MaLR -161 218 1 1 733 3990 206 15 7 chr17 19518497 19519356 -75753295 - Lx2 LINE L1 0 6997 6132 1 733 21 0 0 0 chr17 19519361 19519382 -75753269 + AT_rich Low_complexity Low_complexity 1 21 0 1 733 25 0 0 0 chr17 19520450 19520475 -75752176 + AT_rich Low_complexity Low_complexity 1 25 0 1 733 374 291 27 60 chr17 19520482 19520632 -75752019 + ORR1C2 LTR MaLR 82 226 -158 1 733 1702 221 26 3 chr17 19520765 19521225 -75751426 - Lx2 LINE L1 -992 5981 5516 1 733 11575 139 30 2 chr17 19521228 19523492 -75749159 - L1_Mus3 LINE L1 -532 6106 3789 1 733 823 234 28 5 chr17 19523476 19523691 -75748960 - Lx2 LINE L1 -350 5536 5317 1 733 1246 225 35 26 chr17 19523730 19523876 -75748775 - Lx2 LINE L1 -886 5000 4863 1 733 950 135 6 0 chr17 19523876 19524054 -75748597 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1 733 1246 225 35 26 chr17 19524054 19524171 -75748480 - Lx2 LINE L1 -1024 4862 4745 1 733 291 28 0 0 chr17 19524171 19524207 -75748444 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 2 733 1246 225 35 26 chr17 19524207 19524285 -75748366 - Lx2 LINE L1 -1142 4744 4657 1 733 7893 39 1 8 chr17 19524283 19525769 -75746882 - L1Md_F2 LINE L1 -12 6570 5099 2 733 1183 197 78 3 chr17 19525757 19526053 -75746598 - Lx2 LINE L1 -1229 4648 4331 1 733 22 80 0 0 chr17 19526087 19526137 -75746514 + AT_rich Low_complexity Low_complexity 1 50 0 2 733 1436 220 43 0 chr17 19526194 19526498 -75746153 - ORR1A3 LTR MaLR -9 317 1 2 733 2547 267 55 68 chr17 19526498 19528028 -75744623 - ORR1A3-int LTR MaLR 0 1963 18 2 733 8956 8 0 1 chr17 19528092 19529327 -75743324 - L1Md_T LINE L1 0 6582 5349 2 733 1302 223 21 21 chr17 19529335 19529614 -75743037 - ORR1A3 LTR MaLR -47 279 1 2 734 25 31 0 0 chr17 19531716 19531748 -75740903 + AT_rich Low_complexity Low_complexity 1 32 0 2 734 41 36 0 0 chr17 19532331 19532386 -75740265 + AT_rich Low_complexity Low_complexity 1 55 0 2 734 188 67 33 0 chr17 19533233 19533263 -75739388 + (TAAAA)n Simple_repeat Simple_repeat 4 34 0 2 734 275 65 22 0 chr17 19533412 19533458 -75739193 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 734 27 0 0 0 chr17 19533660 19533687 -75738964 + AT_rich Low_complexity Low_complexity 1 27 0 2 734 501 336 54 5 chr17 19533929 19534150 -75738501 - Lx3C LINE L1 -4 6972 6741 3 734 484 271 50 6 chr17 19534129 19534289 -75738362 - Lx4B LINE L1 -513 6545 6379 3 734 7016 131 5 28 chr17 19534383 19535830 -75736821 - L1_Mus2 LINE L1 0 6566 5242 3 734 3058 40 0 0 chr17 19535830 19536184 -75736467 + IAPEY2_LTR LTR ERVK 1 354 -3 3 734 6406 201 2 83 chr17 19536184 19536974 -75735677 - L1_Mus2 LINE L1 -645 5241 4453 3 734 6341 120 51 1 chr17 19536957 19537917 -75734734 - L1VL1 LINE L1 -5414 1008 1 3 734 1125 230 95 9 chr17 19538138 19538598 -75734053 - Lx4A LINE L1 -507 6551 6052 3 734 1805 211 103 4 chr17 19538624 19539090 -75733561 + Lx4A LINE L1 6545 7056 -2 3 734 515 310 75 56 chr17 19539376 19539752 -75732899 + Lx9 LINE L1 6979 7361 -283 3 734 2732 224 20 28 chr17 19540052 19540815 -75731836 - L1_Mur2 LINE L1 -499 5378 4622 3 734 2974 281 50 1 chr17 19540852 19541689 -75730962 + Lx4A LINE L1 6129 7006 -52 3 734 21 36 0 0 chr17 19541689 19541717 -75730934 + AT_rich Low_complexity Low_complexity 1 28 0 4 734 308 301 17 26 chr17 19541769 19541885 -75730766 + RMER12 LTR ERVK 750 864 -458 4 734 213 296 10 10 chr17 19541949 19542048 -75730603 + CT-rich Low_complexity Low_complexity 2 100 0 4 734 3710 146 16 67 chr17 19542399 19542544 -75730107 - RMER17A LTR ERVK 0 751 623 4 734 2264 155 64 42 chr17 19542544 19543016 -75729635 - RLTR45 LTR ERVK 0 482 1 4 734 3710 146 16 67 chr17 19543016 19543661 -75728990 - RMER17A LTR ERVK -129 622 1 4 734 1186 71 21 26 chr17 19543661 19543850 -75728801 - RMER17A-int LTR ERVK 0 1728 1541 4 734 6640 121 32 22 chr17 19544176 19545257 -75727394 + RMER17A-int LTR ERVK 636 1727 -1 4 734 5072 123 8 81 chr17 19545259 19546214 -75726437 + RMER17D LTR ERVK 1 886 -3 4 734 185 221 0 14 chr17 19546228 19546297 -75726354 + CT-rich Low_complexity Low_complexity 1 68 0 4 734 261 213 51 39 chr17 19546545 19546623 -75726028 - RMER15 LTR ERVL -471 104 26 4 734 1341 347 111 40 chr17 19547014 19547196 -75725455 - RMER1A Other Other -5 1025 820 4 734 1292 175 149 25 chr17 19547196 19547518 -75725133 - RLTR9A LTR ERVK -4 364 3 4 734 1341 347 111 40 chr17 19547518 19548290 -75724361 - RMER1A Other Other -211 819 3 4 734 288 405 19 28 chr17 19548459 19548675 -75723976 - Lx5 LINE L1 -23 7027 6814 5 734 279 0 0 0 chr17 19550065 19550096 -75722555 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 734 257 286 48 0 chr17 19550177 19550261 -75722390 + L1M3 LINE L1 5131 5218 -922 5 734 321 306 46 56 chr17 19550293 19550490 -75722161 + L1M5 LINE L1 5258 5452 -710 5 734 216 0 0 0 chr17 19551124 19551148 -75721503 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 5 734 222 275 12 0 chr17 19551227 19551307 -75721344 + A-rich Low_complexity Low_complexity 4 84 0 5 734 416 222 0 10 chr17 19551318 19551418 -75721233 + Lx4B LINE L1 5689 5787 -90 5 734 7720 159 12 12 chr17 19551416 19553131 -75719520 + Lx3_Mus LINE L1 5291 7001 -8 5 734 2886 275 5 11 chr17 19553165 19553964 -75718687 + Lx4B LINE L1 5783 6576 -482 5 734 3004 276 92 35 chr17 19553957 19554682 -75717969 + L1_Mur2 LINE L1 1314 2058 -3819 5 734 300 53 0 0 chr17 19554682 19554720 -75717931 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 734 3004 276 87 86 chr17 19554720 19556014 -75716637 + L1_Mur2 LINE L1 2059 3344 -2503 5 734 1624 196 12 5 chr17 19556043 19556352 -75716299 + ORR1A2 LTR MaLR 3 299 -71 6 734 380 102 51 0 chr17 19556354 19556413 -75716238 - Lx4B LINE L1 -1152 5906 5845 6 734 1765 176 9 0 chr17 19556414 19556738 -75715913 + ORR1A2 LTR MaLR 1 327 0 6 734 6511 217 83 37 chr17 19556738 19558615 -75714036 + ORR1A2-int LTR MaLR 1 1963 0 6 734 1683 174 18 59 chr17 19558615 19558956 -75713695 + ORR1A2 LTR MaLR 1 327 0 6 734 1140 264 58 7 chr17 19558962 19559424 -75713227 + L1_Mur2 LINE L1 3386 3871 -2009 5 734 958 240 105 50 chr17 19559752 19560278 -75712373 + L1_Mur2 LINE L1 3898 4451 -1429 5 734 1474 253 12 0 chr17 19560245 19560660 -75711991 + L1_Mur2 LINE L1 4767 5186 -691 5 734 2776 251 26 14 chr17 19560704 19561422 -75711229 - Lx4A LINE L1 0 7058 6332 6 734 4976 188 59 34 chr17 19561419 19561809 -75710842 + L1_Mur2 LINE L1 1459 1854 -4023 6 734 4667 54 5 5 chr17 19561809 19562406 -75710245 + L1Md_F3 LINE L1 5988 6584 0 6 734 4976 188 59 34 chr17 19562406 19562583 -75710068 + L1_Mur2 LINE L1 1855 2070 -3807 6 734 402 69 0 0 chr17 19562583 19562641 -75710010 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 734 4976 188 59 34 chr17 19562641 19563409 -75709242 + L1_Mur2 LINE L1 2071 2827 -3050 6 734 435 223 0 0 chr17 19563399 19563511 -75709140 + L1_Mur2 LINE L1 5180 5291 -589 6 734 6723 105 25 5 chr17 19563778 19565041 -75707610 - L1_Mus1 LINE L1 -24 6543 5259 6 734 262 259 32 72 chr17 19565041 19565166 -75707485 + MYSERV6-int LTR ERVK 4250 4369 -4590 6 734 276 252 80 88 chr17 19566092 19566263 -75706388 + RMER4B LTR ERVK 260 547 -38 6 734 22 0 0 0 chr17 19566552 19566574 -75706077 + AT_rich Low_complexity Low_complexity 1 22 0 7 734 3284 105 13 4 chr17 19566844 19567343 -75705308 + L1_Mus3 LINE L1 5704 6187 -451 7 734 4425 166 25 51 chr17 19567343 19568257 -75704394 + RMER17A2 LTR ERVK 1 890 -16 7 734 3032 103 16 2 chr17 19568273 19568721 -75703930 + L1_Mus3 LINE L1 6182 6635 -3 7 734 1053 299 40 48 chr17 19568795 19569518 -75703133 + MYSERV6-int LTR ERVK 8129 8693 -266 7 734 335 192 0 13 chr17 19569674 19569753 -75702898 + MYSERV-int LTR ERVK 6369 6446 -104 7 734 1012 168 34 5 chr17 19569753 19569957 -75702694 - L1_Mus3 LINE L1 -6 6632 6423 7 734 189 0 0 0 chr17 19571811 19571832 -75700819 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 7 734 21 71 0 0 chr17 19571962 19572004 -75700647 + AT_rich Low_complexity Low_complexity 1 42 0 7 734 416 153 0 0 chr17 19573106 19573191 -75699460 - L1Md_A LINE L1 -3 6579 6495 7 734 6694 82 0 1 chr17 19573191 19574154 -75698497 - L1Md_F2 LINE L1 -655 5927 4966 7 734 218 0 45 45 chr17 19574627 19574671 -75697980 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 8 734 333 278 64 119 chr17 19575554 19575958 -75696693 + RLTR45-int LTR ERVK 1611 1992 -4175 8 734 213 65 0 0 chr17 19575974 19576005 -75696646 + (T)n Simple_repeat Simple_repeat 1 31 0 8 734 742 312 19 24 chr17 19576286 19576657 -75695994 + RLTR45-int LTR ERVK 2697 3065 -5152 8 734 764 94 86 0 chr17 19577344 19577461 -75695190 + RLTR45 LTR ERVK 1 127 -355 8 734 339 183 0 0 chr17 19577920 19577980 -75694671 + RLTR45-int LTR ERVK 6275 6334 -1883 8 734 2453 77 15 0 chr17 19578338 19578662 -75693989 + RLTR45-int LTR ERVK 1317 1645 -5599 8 734 7423 146 5 17 chr17 19578840 19580169 -75692482 + RLTR45-int LTR ERVK 6331 7761 -456 8 734 2372 158 40 37 chr17 19580169 19580650 -75692001 + RLTR45 LTR ERVK 1 482 0 8 734 1385 302 43 8 chr17 19580998 19581555 -75691096 + RNERVK23-int LTR ERVK 7241 7762 -455 8 734 4729 106 21 0 chr17 19582459 19583237 -75689414 + MERVL-int LTR ERVL 4693 5629 -132 8 734 298 206 13 40 chr17 19583237 19583313 -75689338 + ORR1A3-int LTR MaLR 567 640 -1323 8 734 268 79 0 0 chr17 19583313 19583351 -75689300 + MERVL-int LTR ERVL 5448 5485 0 8 734 3277 91 13 69 chr17 19583351 19583873 -75688778 + MT2_Mm LTR ERVL 1 493 0 8 734 5283 123 5 10 chr17 19584321 19585131 -75687520 + RLTR13D1 LTR ERVK 1 806 0 8 734 352 85 0 0 chr17 19585594 19585659 -75686992 + (TTCC)n Simple_repeat Simple_repeat 1 65 0 8 734 659 120 9 0 chr17 19585659 19585767 -75686884 + (TTCTC)n Simple_repeat Simple_repeat 3 111 0 9 734 2185 207 53 68 chr17 19585767 19586409 -75686242 - L1_Mur2 LINE L1 -1017 4860 4229 9 734 3687 116 17 179 chr17 19586409 19587306 -75685345 - RMER17A LTR ERVK 0 751 1 9 734 1624 195 25 38 chr17 19587309 19587757 -75684894 - L1_Mur2 LINE L1 -1645 4241 3800 9 734 783 231 24 0 chr17 19587770 19587978 -75684673 + L1_Mur2 LINE L1 4209 4421 -1456 9 734 3601 222 54 101 chr17 19587982 19589214 -75683437 - ORR1A3-int LTR MaLR -781 1182 9 9 734 2142 224 35 0 chr17 19589651 19590110 -75682541 + Lx LINE L1 6180 6654 0 9 734 2519 148 19 10 chr17 19590389 19590806 -75681845 - BGLII LTR ERVK 0 421 1 9 734 32 57 0 0 chr17 19592184 19592237 -75680414 + AT_rich Low_complexity Low_complexity 1 53 0 9 734 234 299 30 20 chr17 19592533 19592632 -75680019 + Lx9 LINE L1 6788 6887 -757 9 734 516 336 52 13 chr17 19593740 19593972 -75678679 - Lx3C LINE L1 -3 6973 6733 9 734 305 210 76 48 chr17 19593948 19594053 -75678598 - Lx4A LINE L1 -518 6540 6433 9 734 475 227 242 0 chr17 19594229 19594357 -75678294 - Lx4A LINE L1 -653 6405 6247 9 734 1047 177 0 0 chr17 19594386 19594561 -75678090 + Lx3C LINE L1 6469 6643 -333 1 734 624 250 22 22 chr17 19594562 19594746 -75677905 - Lx4A LINE L1 -808 6250 6067 9 734 714 24 0 0 chr17 19594774 19594858 -75677793 + (TA)n Simple_repeat Simple_repeat 2 85 0 1 734 2900 217 17 12 chr17 19595191 19595947 -75676704 - Lx4A LINE L1 -478 5399 4640 9 734 237 83 0 0 chr17 19595957 19595993 -75676658 + (TTG)n Simple_repeat Simple_repeat 2 37 0 1 734 2039 230 129 16 chr17 19596013 19596800 -75675851 + Lx4A LINE L1 6133 7008 -50 1 734 209 146 21 0 chr17 19596911 19596959 -75675692 + (TATG)n Simple_repeat Simple_repeat 2 50 0 1 734 239 296 37 25 chr17 19597016 19597179 -75675472 + (TCTA)n Simple_repeat Simple_repeat 3 167 0 1 734 22 35 0 0 chr17 19597360 19597389 -75675262 + AT_rich Low_complexity Low_complexity 1 29 0 1 734 1275 196 14 7 chr17 19597420 19597697 -75674954 - Lx LINE L1 0 6654 6376 1 734 346 221 9 9 chr17 19598253 19598358 -75674293 - L1_Mus4 LINE L1 -8 6628 6524 1 734 970 136 47 11 chr17 19598359 19598594 -75674057 - MusHAL1 LINE L1 -2547 1365 1118 1 734 4370 101 25 2 chr17 19598596 19599232 -75673419 - L1Md_F2 LINE L1 0 6582 5932 1 734 687 119 0 18 chr17 19599232 19599343 -75673308 + L1_Mm LINE L1 5314 5422 -461 1 734 2605 215 78 26 chr17 19599337 19600299 -75672352 - L1Md_F LINE L1 -5434 1085 123 1 734 2117 219 21 25 chr17 19600301 19600774 -75671877 - ORR1A3-int LTR MaLR -1492 471 1 1 734 318 164 0 0 chr17 19600774 19600829 -75671822 - ORR1A3 LTR MaLR 0 326 272 1 734 2794 241 21 14 chr17 19600829 19601486 -75671165 - Lx2B LINE L1 -6 6994 6333 1 734 705 176 0 29 chr17 19601482 19601622 -75671029 - MusHAL1 LINE L1 -1142 1570 1435 1 734 1697 208 0 6 chr17 19601623 19601962 -75670689 + Lx2 LINE L1 6660 6996 -1 1 734 1871 245 11 4 chr17 19601965 19602416 -75670235 - Lx2B LINE L1 -651 6349 5896 1 734 2913 215 93 83 chr17 19602406 19603105 -75669546 + L1_Mur1 LINE L1 4361 4983 -903 1 734 183 42 0 0 chr17 19603105 19603129 -75669522 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1 734 2913 215 93 83 chr17 19603129 19603193 -75669458 + L1_Mur1 LINE L1 4984 5120 -766 1 734 3975 152 44 60 chr17 19603193 19604096 -75668555 + RMER17D LTR ERVK 1 889 0 1 734 2913 215 93 83 chr17 19604096 19604354 -75668297 + L1_Mur1 LINE L1 5121 5391 -495 1 734 2000 267 13 61 chr17 19604352 19604751 -75667900 - L1_Mur2 LINE L1 -3431 2446 2061 1 734 228 86 0 0 chr17 19604751 19604786 -75667865 + (TGG)n Simple_repeat Simple_repeat 1 35 0 1 734 2000 267 13 61 chr17 19604786 19605207 -75667444 - L1_Mur2 LINE L1 -3817 2060 1665 1 734 363 204 29 10 chr17 19605211 19605315 -75667336 - L1_Mur2 LINE L1 -4541 1336 1231 1 734 484 15 31 0 chr17 19605359 19605424 -75667227 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 1 734 386 208 0 0 chr17 19605428 19605505 -75667146 - L1_Mur2 LINE L1 -6006 1080 1004 1 734 256 175 175 0 chr17 19605507 19605564 -75667087 - Lx4B LINE L1 -435 6623 6557 1 734 348 317 40 58 chr17 19606524 19606698 -75665953 - Lx7 LINE L1 -1927 5769 5599 1 734 295 273 74 46 chr17 19607037 19607264 -75665387 - L1M3 LINE L1 -867 5276 5040 1 734 279 0 0 0 chr17 19608173 19608204 -75664447 + (A)n Simple_repeat Simple_repeat 1 31 0 1 734 252 0 0 0 chr17 19608414 19608442 -75664209 + (A)n Simple_repeat Simple_repeat 1 28 0 1 734 584 340 9 19 chr17 19608666 19608882 -75663769 + Lx5 LINE L1 6820 7033 -17 1 734 243 0 0 0 chr17 19609011 19609038 -75663613 + (A)n Simple_repeat Simple_repeat 1 27 0 1 734 1462 361 64 33 chr17 19609083 19609907 -75662744 + RMER1A Other Other 7 858 -172 1 734 965 55 8 0 chr17 19609907 19610035 -75662616 + (TTC)n Simple_repeat Simple_repeat 1 129 0 1 734 1462 297 435 10 chr17 19610035 19610153 -75662498 + RMER1A Other Other 859 1025 -5 1 734 2518 138 5 2 chr17 19610506 19610905 -75661746 + MTB LTR MaLR 1 400 0 1 734 1083 89 7 0 chr17 19610913 19611059 -75661592 + B1_Mus2 SINE Alu 1 147 0 1 734 274 279 10 79 chr17 19611371 19611472 -75661179 + RMER15 LTR ERVL 371 464 -111 1 734 299 170 10 41 chr17 19611476 19611574 -75661077 + GA-rich Low_complexity Low_complexity 2 96 0 1 734 7967 162 39 6 chr17 19612017 19614364 -75658287 + L1VL2 LINE L1 105 2467 -1231 1 734 11021 130 41 28 chr17 19614365 19615050 -75657601 + L1_Mus2 LINE L1 3945 4633 -1250 1 734 513 0 0 0 chr17 19615050 19615107 -75657544 + (CAAAA)n Simple_repeat Simple_repeat 3 59 0 1 734 11021 113 38 16 chr17 19615107 19616913 -75655738 + L1_Mus2 LINE L1 4634 6489 -77 1 734 2852 134 64 4 chr17 19616926 19617443 -75655208 - MusHAL1 LINE L1 -294 2418 1871 1 734 2184 143 99 3 chr17 19617424 19617816 -75654835 + L1_Mus4 LINE L1 5594 6023 -613 1 734 869 261 47 69 chr17 19617849 19618277 -75654374 - RMER13B LTR ERVK -64 796 352 1 734 305 96 0 0 chr17 19618299 19618351 -75654300 - L1_Mus3 LINE L1 -9 6629 6578 1 734 882 196 59 94 chr17 19618352 19618712 -75653939 - RLTRETN_Mm LTR ERVK -10 399 1 1 734 712 159 48 14 chr17 19618712 19618859 -75653792 - MMETn-int LTR ERVK 0 4844 4693 1 734 476 246 176 18 chr17 19618861 19619136 -75653515 - RLTR13D6 LTR ERVK -469 433 118 1 734 6352 131 17 4 chr17 19619136 19620073 -75652578 - ETnERV2-int LTR ERVK -236 7170 6222 1 734 4822 187 37 27 chr17 19620122 19621877 -75650774 - ETnERV2-int LTR ERVK -3321 4085 2356 1 734 2389 124 16 70 chr17 19622108 19622223 -75650428 - ETnERV2-int LTR ERVK -2657 2187 2087 1 734 239 71 24 0 chr17 19622223 19622265 -75650386 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 734 2389 133 17 65 chr17 19622265 19622733 -75649918 - ETnERV2-int LTR ERVK -2758 2086 1730 1 734 5405 143 20 123 chr17 19622807 19624072 -75648579 - ETnERV2-int LTR ERVK -3708 1136 3 1 734 834 167 46 176 chr17 19624076 19624446 -75648205 - RLTRETN_Mm LTR ERVK 0 322 1 1 734 1257 114 19 14 chr17 19624446 19624659 -75647992 - L1_Mus3 LINE L1 -46 6592 6379 1 734 897 228 89 52 chr17 19624659 19625137 -75647514 - RMER17B LTR ERVK -495 463 2 1 734 3233 161 64 18 chr17 19625137 19625746 -75646905 + Lx LINE L1 6011 6647 -7 1 734 1779 149 73 3 chr17 19625754 19626097 -75646554 - L1_Mur1 LINE L1 -1254 4632 4266 1 734 2081 119 57 14 chr17 19626094 19626444 -75646207 + L1_Mus4 LINE L1 6193 6557 -79 1 734 977 116 0 13 chr17 19626678 19626827 -75645824 - B1_Mus2 SINE Alu 0 147 1 1 734 22 0 0 0 chr17 19627121 19627143 -75645508 + AT_rich Low_complexity Low_complexity 1 22 0 1 734 661 157 0 24 chr17 19627291 19627415 -75645236 + L1_Mus4 LINE L1 6439 6559 -77 1 734 22 35 0 0 chr17 19627556 19627585 -75645066 + AT_rich Low_complexity Low_complexity 1 29 0 1 734 330 264 85 4 chr17 19627631 19627792 -75644859 - L1_Mur3 LINE L1 -474 5406 5254 1 734 497 16 16 0 chr17 19627838 19627900 -75644751 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 734 7386 180 37 9 chr17 19627904 19629333 -75643318 + Lx2A LINE L1 5297 6743 -265 1 734 447 19 0 0 chr17 19629333 19629385 -75643266 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 734 7386 175 45 9 chr17 19629385 19629623 -75643028 + Lx2A LINE L1 6744 7008 0 1 734 23015 75 2 4 chr17 19629740 19632853 -75639798 + L1Md_F2 LINE L1 2480 5586 -297 1 734 7917 49 2 2 chr17 19632853 19633837 -75638814 + L1Md_F2 LINE L1 5587 6570 -12 1 734 227 135 0 0 chr17 19633844 19633881 -75638770 - MusHAL1 LINE L1 -581 2131 2095 1 734 2798 82 0 0 chr17 19633881 19634245 -75638406 + L1_Mus1 LINE L1 6199 6562 -5 1 734 7546 199 120 14 chr17 19634285 19635750 -75636901 + L1_Mur2 LINE L1 3611 5277 -600 1 734 1022 111 0 0 chr17 19635750 19635894 -75636757 + B1_Mus1 SINE Alu 1 144 -4 1 734 357 24 0 0 chr17 19635895 19635937 -75636714 + (TAA)n Simple_repeat Simple_repeat 1 42 0 1 734 7546 199 120 14 chr17 19635937 19636325 -75636326 + L1_Mur2 LINE L1 5278 5661 -216 1 734 359 175 0 28 chr17 19636404 19636510 -75636141 + A-rich Low_complexity Low_complexity 1 103 0 1 734 363 302 40 63 chr17 19637561 19637737 -75634914 + MYSERV6-int LTR ERVK 1637 1791 -7168 1 734 1615 212 21 3 chr17 19637909 19638236 -75634415 + ORR1A1 LTR MaLR 6 338 -8 1 734 442 332 53 42 chr17 19639127 19639410 -75633241 + MYSERV-int LTR ERVK 4843 5128 -1422 1 734 260 289 82 10 chr17 19639508 19639606 -75633045 + RMER4B LTR ERVK 448 552 -33 1 734 903 285 68 58 chr17 19640133 19640887 -75631764 + MYSERV6-int LTR ERVK 8116 8693 -266 1 734 331 231 73 24 chr17 19641037 19641161 -75631490 + MYSERV-int LTR ERVK 6369 6498 -52 1 734 441 0 0 0 chr17 19644848 19644897 -75627754 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 734 21 0 0 0 chr17 19645399 19645420 -75627231 + AT_rich Low_complexity Low_complexity 1 21 0 1 734 265 357 109 12 chr17 19645665 19645866 -75626785 - B3A SINE B2 0 216 1 1 734 5082 142 15 13 chr17 19646015 19646295 -75626356 + RLTR22_Mur LTR ERVK 1 281 -1567 1 734 788 79 9 0 chr17 19646295 19646409 -75626242 - L1_Mus2 LINE L1 0 6566 6452 1 734 5082 142 15 13 chr17 19646409 19646960 -75625691 + RLTR22_Mur LTR ERVK 282 833 -1015 1 734 306 73 0 0 chr17 19646960 19647001 -75625650 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 1 734 5082 142 15 13 chr17 19647001 19647036 -75625615 + RLTR22_Mur LTR ERVK 834 870 -978 1 734 1036 215 158 19 chr17 19648296 19648618 -75624033 + ORR1B1 LTR MaLR 5 371 -23 1 734 1350 279 26 24 chr17 19648640 19648903 -75623748 + ORR1B1-int LTR MaLR 1 264 -1245 1 734 4477 143 84 26 chr17 19648903 19649759 -75622892 - RMER17A2 LTR ERVK 0 906 1 1 734 1350 282 27 24 chr17 19649759 19649972 -75622679 + ORR1B1-int LTR MaLR 265 483 -887 1 734 1587 161 18 62 chr17 19649972 19650309 -75622342 + RLTRETN_Mm LTR ERVK 1 322 0 1 734 1030 333 41 34 chr17 19650309 19650387 -75622264 + ORR1B1-int LTR MaLR 484 558 -812 1 734 19580 163 47 68 chr17 19650395 19650611 -75622040 + MMETn-int LTR ERVK 85 270 -4574 1 734 369 0 0 0 chr17 19650611 19650652 -75621999 + (CAA)n Simple_repeat Simple_repeat 2 42 0 1 734 19580 163 47 68 chr17 19650652 19655273 -75617378 + MMETn-int LTR ERVK 271 4817 -27 1 734 31 0 0 0 chr17 19655273 19655304 -75617347 + AT_rich Low_complexity Low_complexity 1 31 0 1 734 503 84 0 0 chr17 19655318 19655389 -75617262 + RLTRETN_Mm LTR ERVK 1 71 -251 1 734 1188 257 19 3 chr17 19655390 19655702 -75616949 + ORR1B1-int LTR MaLR 1193 1509 0 1 734 1178 272 47 8 chr17 19655715 19656074 -75616577 + ORR1B1 LTR MaLR 14 386 -8 1 734 340 293 0 71 chr17 19656652 19656768 -75615883 + B1_Mur1 SINE Alu 4 112 -37 1 734 1693 121 32 7 chr17 19657087 19657370 -75615281 - L1_Mus3 LINE L1 -1 6637 6348 1 734 2432 80 6 0 chr17 19657370 19657697 -75614954 + L1_Mus3 LINE L1 6031 6359 -279 1 735 479 416 11 46 chr17 19660908 19661281 -75611370 - ORR1D2 LTR MaLR -6 364 5 1 735 4918 167 9 5 chr17 19661893 19662741 -75609910 - Lx2 LINE L1 0 6997 6146 1 735 295 250 39 59 chr17 19663582 19663684 -75608967 - Lx8 LINE L1 -235 7238 7139 1 735 339 98 12 35 chr17 19663847 19663932 -75608719 + (TTTG)n Simple_repeat Simple_repeat 2 84 0 1 735 1062 83 0 40 chr17 19663935 19664086 -75608565 - B1_Mus1 SINE Alu -2 146 2 1 735 227 318 23 0 chr17 19664099 19664187 -75608464 + ORR1C2 LTR MaLR 61 150 -224 1 735 210 91 0 0 chr17 19664206 19664239 -75608412 + (T)n Simple_repeat Simple_repeat 1 33 0 1 735 7024 27 45 0 chr17 19664247 19665098 -75607553 - L1Md_F2 LINE L1 -14 6568 5680 1 735 332 322 53 68 chr17 19665098 19665288 -75607363 + ORR1C2 LTR MaLR 164 350 -34 1 735 665 201 18 12 chr17 19665345 19665511 -75607140 - Lx3C LINE L1 -1000 5976 5810 1 735 3419 195 8 0 chr17 19665532 19666240 -75606411 - L1_Mur1 LINE L1 -1384 4502 3789 1 735 1500 182 42 114 chr17 19666235 19666689 -75605962 + L1_Mur2 LINE L1 4202 4622 -1255 1 735 564 42 0 0 chr17 19666788 19666859 -75605792 + (CA)n Simple_repeat Simple_repeat 2 72 0 1 735 575 155 0 19 chr17 19667136 19667241 -75605410 - ORR1A3 LTR MaLR -2 324 222 1 735 21 0 0 0 chr17 19667793 19667814 -75604837 + AT_rich Low_complexity Low_complexity 1 21 0 2 735 225 94 0 0 chr17 19669284 19669316 -75603335 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 2 735 1121 83 0 0 chr17 19669376 19669520 -75603131 + B1_Mus1 SINE Alu 1 144 -4 2 735 828 139 12 18 chr17 19669522 19669690 -75602961 + A-rich Low_complexity Low_complexity 4 170 0 2 735 180 0 0 0 chr17 19671247 19671267 -75601384 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 735 21 71 0 0 chr17 19671556 19671598 -75601053 + AT_rich Low_complexity Low_complexity 1 42 0 2 735 22 35 0 0 chr17 19671822 19671851 -75600800 + AT_rich Low_complexity Low_complexity 1 29 0 2 735 3197 110 8 10 chr17 19672760 19673248 -75599403 + L1_Mus3 LINE L1 6151 6637 -1 2 735 351 0 0 0 chr17 19673254 19673293 -75599358 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 735 183 80 0 0 chr17 19673352 19673377 -75599274 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2 735 225 0 0 0 chr17 19673498 19673523 -75599128 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 735 627 248 131 9 chr17 19673767 19673985 -75598666 - Lx2B LINE L1 -19 6981 6742 2 735 289 276 13 0 chr17 19673993 19674069 -75598582 - Lx2B LINE L1 -488 6512 6436 2 735 2835 228 58 24 chr17 19674065 19674635 -75598016 + L1_Mur2 LINE L1 2423 3018 -2859 2 735 2827 162 54 38 chr17 19674635 19675193 -75597458 - RMER2 LTR ERV1 0 567 1 2 735 2835 228 58 24 chr17 19675193 19675549 -75597102 + L1_Mur2 LINE L1 3019 3381 -2496 2 735 1614 182 20 13 chr17 19675553 19675859 -75596792 + ORR1A2 LTR MaLR 3 310 -17 2 735 283 81 0 0 chr17 19675860 19675897 -75596754 - Lx2A LINE L1 -1128 5880 5844 2 735 1432 201 38 6 chr17 19675897 19676212 -75596439 + ORR1A2 LTR MaLR 1 325 -2 2 735 5112 199 85 5 chr17 19676216 19677420 -75595231 + ORR1A2-int LTR MaLR 5 1304 -659 2 735 6268 178 30 58 chr17 19677425 19678073 -75594578 + L1_Mus4 LINE L1 4266 4936 -947 2 735 1845 193 26 5 chr17 19678073 19678459 -75594192 - Lx LINE L1 -8 6646 6253 2 735 6268 178 30 58 chr17 19678459 19678677 -75593974 + L1_Mus4 LINE L1 4937 5154 -729 2 735 4453 152 33 80 chr17 19678677 19679628 -75593023 + RMER17A2 LTR ERVK 1 906 0 2 735 6268 178 30 58 chr17 19679628 19679723 -75592928 + L1_Mus4 LINE L1 5155 5231 -652 2 735 5385 87 1 4 chr17 19679723 19680461 -75592190 + L1_Mus1 LINE L1 5831 6566 -1 2 735 6268 178 30 58 chr17 19680461 19680885 -75591766 + L1_Mus4 LINE L1 5232 5614 -269 2 735 879 238 109 104 chr17 19680885 19681223 -75591428 - RLTR9C LTR ERVK 0 393 54 2 735 1485 141 48 4 chr17 19681225 19681496 -75591155 - MMETn-int LTR ERVK -3682 3724 3442 2 735 3111 104 15 45 chr17 19682004 19682786 -75589865 - MMETn-int LTR ERVK -4387 3019 1728 2 735 6836 123 52 70 chr17 19682818 19684146 -75588505 - MMETn-int LTR ERVK -3538 1306 3 2 735 1066 225 71 108 chr17 19684150 19684558 -75588093 - RLTR9C LTR ERVK 0 393 1 2 735 1764 154 13 3 chr17 19684573 19684895 -75587756 + L1_Mus4 LINE L1 5645 5968 -614 2 735 339 308 45 8 chr17 19685499 19685633 -75587018 - RNERVK23-int LTR ERVK -522 7695 7557 2 735 458 44 29 0 chr17 19685644 19685712 -75586939 + (TCTCC)n Simple_repeat Simple_repeat 3 72 0 2 735 643 128 0 0 chr17 19685969 19686071 -75586580 + L1_Mm LINE L1 4209 4310 -1573 2 735 197 228 13 0 chr17 19686699 19686778 -75585873 + (TG)n Simple_repeat Simple_repeat 1 80 0 2 735 273 245 54 9 chr17 19686803 19686914 -75585737 + Lx9 LINE L1 7522 7637 -7 2 735 25 51 0 0 chr17 19687129 19687168 -75585483 + AT_rich Low_complexity Low_complexity 1 39 0 2 735 21 36 0 0 chr17 19687275 19687303 -75585348 + AT_rich Low_complexity Low_complexity 1 28 0 2 735 3864 156 40 19 chr17 19687715 19688503 -75584148 - Lx3_Mus LINE L1 -653 6356 5548 2 735 3210 105 10 2 chr17 19688500 19688986 -75583665 + L1_Mur1 LINE L1 4144 4633 -1253 2 735 340 77 15 15 chr17 19688989 19689055 -75583596 + (CAAAA)n Simple_repeat Simple_repeat 2 67 0 2 735 2147 109 0 60 chr17 19689080 19689431 -75583220 - L1_Mus2 LINE L1 -2 6564 6235 2 735 650 129 20 0 chr17 19689431 19689532 -75583119 + L1_Mus2 LINE L1 6120 6222 -344 2 735 5457 79 0 3 chr17 19689546 19690269 -75582382 - L1_Mus1 LINE L1 0 6567 5847 2 735 3090 113 22 7 chr17 19690271 19690735 -75581916 + L1_Mus1 LINE L1 5357 5827 -56 2 735 2932 111 17 4 chr17 19690740 19691202 -75581449 + L1_Mur1 LINE L1 4655 5122 -764 2 735 29289 110 15 5 chr17 19691202 19691580 -75581071 + MERVK26-int LTR ERVK 2620 2995 -3924 2 735 2916 81 5 2 chr17 19691580 19691975 -75580676 + MTA_Mm LTR MaLR 1 396 0 2 735 29289 110 15 5 chr17 19691975 19695801 -75576850 + MERVK26-int LTR ERVK 2996 6869 -50 2 735 3102 229 46 35 chr17 19695806 19696743 -75575908 - Lx3_Mus LINE L1 -578 5299 4353 2 735 3197 248 32 143 chr17 19696733 19697061 -75575590 + Lx2B LINE L1 5895 6219 -781 2 735 444 19 0 0 chr17 19697061 19697114 -75575537 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 2 735 3197 248 32 143 chr17 19697114 19697236 -75575415 + Lx2B LINE L1 6220 6336 -664 2 735 1563 212 9 3 chr17 19697236 19697572 -75575079 - Lx2 LINE L1 0 6997 6660 2 735 3197 248 32 143 chr17 19697572 19698355 -75574296 + Lx2B LINE L1 6337 6991 -9 2 735 311 164 0 0 chr17 19698365 19698420 -75574231 + ORR1A2 LTR MaLR 272 326 0 2 735 5878 226 30 72 chr17 19698420 19700289 -75572362 + ORR1A2-int LTR MaLR 1 1790 -2 2 735 1370 219 9 33 chr17 19700290 19700625 -75572026 + ORR1A2 LTR MaLR 1 327 0 2 735 365 259 0 9 chr17 19700626 19700739 -75571912 + L1_Mur2 LINE L1 3381 3492 -2388 2 735 1018 109 0 13 chr17 19700756 19700905 -75571746 - B1_Mus2 SINE Alu 0 147 1 2 735 3231 247 75 32 chr17 19700912 19700950 -75571701 + L1_Mur2 LINE L1 3498 3533 -2344 2 735 2768 53 9 0 chr17 19700950 19701292 -75571359 - IAPLTR4 LTR ERVK 0 345 1 2 735 3231 247 75 32 chr17 19701292 19702497 -75570154 + L1_Mur2 LINE L1 3534 4803 -1074 2 735 192 40 0 0 chr17 19702497 19702522 -75570129 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 2 735 3231 247 75 32 chr17 19702522 19702593 -75570058 + L1_Mur2 LINE L1 4804 4870 -1007 2 735 8261 146 7 1 chr17 19702610 19704758 -75567893 - L1_Mus3 LINE L1 -3 6635 4477 2 735 557 211 0 8 chr17 19704756 19704885 -75567766 + L1_Mur2 LINE L1 2697 2824 -3053 2 735 3075 220 48 8 chr17 19704907 19705572 -75567079 + RLTR17 LTR ERVK 1 692 0 2 735 331 222 167 0 chr17 19705580 19705688 -75566963 + L1_Mur2 LINE L1 5203 5328 -549 2 735 5525 181 86 48 chr17 19705878 19707058 -75565593 - Lx2A LINE L1 -3 7005 5780 2 735 1815 317 52 37 chr17 19707376 19708618 -75564033 + MYSERV6-int LTR ERVK 1635 2895 -6064 2 735 421 300 33 7 chr17 19708626 19708777 -75563874 + MurERV4_19-int LTR ERVK 4580 4734 -1046 2 735 422 65 16 0 chr17 19708840 19708902 -75563749 + (TTTTC)n Simple_repeat Simple_repeat 3 65 0 2 735 864 163 0 13 chr17 19708907 19709056 -75563595 - B1_Mus1 SINE Alu -1 147 1 2 735 292 289 96 80 chr17 19709739 19709927 -75562724 + MurERV4_19-int LTR ERVK 4843 5033 -1517 2 735 455 243 105 115 chr17 19709975 19710175 -75562476 + RMER4A LTR ERVK 242 439 -27 2 735 278 303 0 0 chr17 19710820 19710909 -75561742 + RLTR19-int LTR ERVK 2330 2418 -3719 2 735 22 0 0 0 chr17 19711031 19711053 -75561598 + AT_rich Low_complexity Low_complexity 1 22 0 2 735 892 270 103 44 chr17 19711085 19711492 -75561159 + MYSERV6-int LTR ERVK 8265 8695 -264 2 735 268 170 110 33 chr17 19711642 19711733 -75560918 + MYSERV6-int LTR ERVK 8801 8898 -61 2 735 5005 113 24 1 chr17 19711734 19712512 -75560139 + RLTR22_Mus LTR ERVK 1 796 -1012 2 735 561 321 15 0 chr17 19712518 19712649 -75560002 + ETnERV2-int LTR ERVK 7070 7202 -204 2 735 318 344 54 30 chr17 19713320 19713488 -75559163 + RMER12 LTR ERVK 1101 1272 -50 2 735 27 0 0 0 chr17 19713826 19713853 -75558798 + AT_rich Low_complexity Low_complexity 1 27 0 2 735 24 91 0 0 chr17 19714468 19714534 -75558117 + AT_rich Low_complexity Low_complexity 1 66 0 2 735 332 77 19 0 chr17 19715591 19715643 -75557008 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 735 25 51 0 0 chr17 19715772 19715811 -75556840 + AT_rich Low_complexity Low_complexity 1 39 0 2 735 21 57 0 0 chr17 19716164 19716199 -75556452 + AT_rich Low_complexity Low_complexity 1 35 0 2 735 22 56 0 0 chr17 19717157 19717193 -75555458 + AT_rich Low_complexity Low_complexity 1 36 0 2 735 4540 162 13 18 chr17 19717285 19718139 -75554512 + RLTR22_Mur LTR ERVK 6 855 -993 2 735 516 32 0 0 chr17 19719650 19719712 -75552939 + (TA)n Simple_repeat Simple_repeat 2 63 0 2 735 795 270 160 9 chr17 19721000 19721318 -75551333 + ORR1B1 LTR MaLR 5 370 -24 2 735 2643 319 33 83 chr17 19721341 19721769 -75550882 + ORR1B1-int LTR MaLR 1 419 -951 2 735 838 139 7 7 chr17 19721769 19721907 -75550744 + B1_Mus1 SINE Alu 3 140 -8 2 735 2643 319 33 83 chr17 19721907 19722919 -75549732 + ORR1B1-int LTR MaLR 420 1370 0 2 735 585 303 45 16 chr17 19722919 19723164 -75549487 + ORR1B1 LTR MaLR 1 252 -142 2 735 273 268 16 132 chr17 19723460 19723589 -75549062 + MT2B2 LTR ERVL 130 243 -341 2 735 245 349 0 23 chr17 19723513 19723601 -75549050 + B1_Mur4 SINE Alu 14 99 -51 2 735 2511 109 10 2 chr17 19723601 19723995 -75548656 + L1Md_F2 LINE L1 5190 5586 -297 2 735 6232 100 57 8 chr17 19723996 19724933 -75547718 + L1Md_F2 LINE L1 5588 6569 -13 2 735 27 62 0 0 chr17 19725673 19725721 -75546930 + AT_rich Low_complexity Low_complexity 1 48 0 2 735 21 0 0 0 chr17 19728186 19728207 -75544444 + AT_rich Low_complexity Low_complexity 1 21 0 2 735 754 203 7 128 chr17 19728288 19728570 -75544081 + Lx3B LINE L1 4738 4985 -892 2 735 2426 214 16 10 chr17 19728566 19729237 -75543414 + Lx3B LINE L1 5311 5984 -989 2 735 295 326 71 14 chr17 19729332 19729472 -75543179 - ORR1A4 LTR MaLR -83 246 99 2 735 9911 191 33 2 chr17 19730212 19730398 -75542253 + L1_Mus3 LINE L1 3653 3838 -2045 2 735 234 0 0 0 chr17 19730398 19730424 -75542227 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 735 9911 191 33 2 chr17 19730424 19730681 -75541970 + L1_Mus3 LINE L1 3839 4113 -1770 2 735 192 77 0 0 chr17 19730681 19730707 -75541944 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2 735 9911 174 27 3 chr17 19730707 19733168 -75539483 + L1_Mus3 LINE L1 4114 6637 -1 2 735 3227 194 15 1 chr17 19733533 19734200 -75538451 + Lx2 LINE L1 6146 6821 -176 2 735 11469 14 0 0 chr17 19734213 19736301 -75536350 - L1Md_T LINE L1 0 6582 4495 2 735 5495 10 0 0 chr17 19736301 19736910 -75535741 + L1Md_T LINE L1 5974 6582 0 2 735 3227 194 15 1 chr17 19736926 19737593 -75535058 - Lx2 LINE L1 -176 6821 6146 2 735 9911 174 27 3 chr17 19737958 19740419 -75532232 - L1_Mus3 LINE L1 -1 6637 4130 2 735 192 77 0 0 chr17 19740419 19740445 -75532206 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2 735 9911 191 33 2 chr17 19740445 19740702 -75531949 - L1_Mus3 LINE L1 -1754 4129 3841 2 735 234 0 0 0 chr17 19740702 19740728 -75531923 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 735 9911 191 33 2 chr17 19740728 19740914 -75531737 - L1_Mus3 LINE L1 -2043 3840 3656 2 735 295 326 71 14 chr17 19741654 19741794 -75530857 + ORR1A4 LTR MaLR 99 246 -83 2 735 2426 214 16 10 chr17 19741889 19742560 -75530091 - Lx2 LINE L1 -989 5984 5311 2 735 4016 207 65 41 chr17 19742556 19743741 -75528910 - Lx2 LINE L1 -892 4985 3773 2 735 1586 207 37 2 chr17 19743730 19744136 -75528515 + L1_Mur2 LINE L1 4203 4622 -1255 2 735 219 36 0 0 chr17 19744245 19744273 -75528378 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 735 1357 240 19 16 chr17 19744565 19744878 -75527773 - ORR1A2 LTR MaLR -8 319 6 2 735 2733 251 76 141 chr17 19744882 19746980 -75525671 - ORR1A2-int LTR MaLR 0 1963 2 2 735 1294 231 51 3 chr17 19746981 19747026 -75525625 - ORR1A2 LTR MaLR 0 327 267 2 735 228 64 64 0 chr17 19747026 19747073 -75525578 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 735 1294 231 51 3 chr17 19747073 19747339 -75525312 - ORR1A2 LTR MaLR -61 266 1 2 735 22 35 0 0 chr17 19749847 19749876 -75522775 + AT_rich Low_complexity Low_complexity 1 29 0 2 735 28 29 0 0 chr17 19751308 19751343 -75521308 + AT_rich Low_complexity Low_complexity 1 35 0 2 735 435 314 59 0 chr17 19751723 19751943 -75520708 - Lx3C LINE L1 -3 6973 6741 2 735 317 262 33 9 chr17 19751929 19752081 -75520570 - Lx3C LINE L1 -436 6540 6380 2 735 24 0 0 0 chr17 19752156 19752180 -75520471 + AT_rich Low_complexity Low_complexity 1 24 0 2 735 1122 221 127 0 chr17 19752360 19752659 -75519992 - Lx4A LINE L1 -502 6556 6220 2 735 642 99 45 0 chr17 19752669 19752801 -75519850 - L1Md_F2 LINE L1 0 6582 6467 2 735 425 78 16 0 chr17 19752802 19752866 -75519785 + L1Md_F2 LINE L1 6272 6336 -246 2 735 538 232 35 47 chr17 19752868 19753040 -75519611 - Lx4A LINE L1 -829 6229 6060 2 735 1843 214 97 2 chr17 19753070 19753543 -75519108 + Lx4A LINE L1 6541 7058 0 2 735 332 323 41 38 chr17 19753807 19754100 -75518551 + Lx9 LINE L1 6979 7272 -372 2 735 276 30 0 0 chr17 19754115 19754148 -75518503 + (TTTCC)n Simple_repeat Simple_repeat 1 33 0 2 735 1371 62 0 0 chr17 19754150 19754328 -75518323 + (TCTCC)n Simple_repeat Simple_repeat 1 178 0 3 735 1230 56 0 37 chr17 19754334 19754521 -75518130 + (TCCCC)n Simple_repeat Simple_repeat 1 180 0 3 735 296 102 0 20 chr17 19754520 19754570 -75518081 + (TTTTC)n Simple_repeat Simple_repeat 3 51 0 3 735 219 247 0 0 chr17 19754601 19754674 -75517977 + T-rich Low_complexity Low_complexity 1 73 0 3 735 1208 347 65 14 chr17 19755279 19756218 -75516433 - RMER1B Other Other -9 1057 16 3 735 26 30 0 0 chr17 19756350 19756383 -75516268 + AT_rich Low_complexity Low_complexity 1 33 0 3 735 235 408 31 16 chr17 19756391 19756585 -75516066 - Lx5 LINE L1 -23 7027 6831 3 735 9041 119 8 23 chr17 19756726 19758968 -75513683 - L1_Mus2 LINE L1 0 6566 4359 3 735 998 310 4 24 chr17 19759730 19760154 -75512497 - RNERVK23-int LTR ERVK -455 7762 7403 3 735 652 302 18 28 chr17 19759978 19760264 -75512387 - RLTR4_MM-int LTR ERV1 -298 7303 7021 3 735 410 243 52 46 chr17 19761709 19761903 -75510748 - SRV_MM-int LTR ERVK -857 5310 5116 3 735 1152 280 95 77 chr17 19761898 19762497 -75510154 - RNERVK23-int LTR ERVK -4566 3651 2982 3 735 3125 52 17 10 chr17 19762497 19762905 -75509746 - L1Md_F3 LINE L1 0 6584 6174 3 735 1152 317 68 43 chr17 19762905 19763478 -75509173 - RNERVK23-int LTR ERVK -4842 3375 2378 3 735 356 288 35 52 chr17 19765819 19766105 -75506546 - RLTR45-int LTR ERVK -6806 438 158 3 735 17234 143 12 25 chr17 19766647 19770343 -75502308 - L1Md_F LINE L1 -1520 4363 725 3 735 275 57 0 0 chr17 19770595 19770630 -75502021 - L1VL1 LINE L1 -6296 126 92 3 735 1136 79 18 7 chr17 19770832 19771023 -75501628 - MTA_Mm LTR MaLR 0 407 212 3 735 4623 163 24 13 chr17 19771260 19772106 -75500545 - RLTR13A LTR ERVK 0 855 1 3 735 3233 133 54 2 chr17 19772379 19772930 -75499721 + L1Md_F LINE L1 272 851 -5668 3 735 17509 268 21 18 chr17 19773031 19779084 -75493567 - IAP-d-int LTR ERVK -483 6059 2 3 735 1049 207 175 32 chr17 19779085 19779399 -75493252 - RLTR10D LTR ERVK 0 359 1 3 735 4188 234 52 25 chr17 19779399 19780813 -75491838 + L1_Mur2 LINE L1 3420 4870 -1007 3 735 6247 134 62 0 chr17 19780825 19782118 -75490533 - L1_Mus3 LINE L1 -2 6636 5288 3 735 5612 134 69 39 chr17 19782109 19783065 -75489586 - L1_Mus3 LINE L1 -1 6637 5644 3 735 986 119 0 0 chr17 19783065 19783208 -75489443 + B1_Mm SINE Alu 3 145 -2 3 735 198 0 0 0 chr17 19783208 19783230 -75489421 + (TAA)n Simple_repeat Simple_repeat 2 23 0 3 735 1058 130 6 0 chr17 19783235 19783412 -75489239 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 3 735 5612 154 6 26 chr17 19783412 19784132 -75488519 - L1_Mus3 LINE L1 -995 5643 4925 3 735 16277 119 49 4 chr17 19784129 19784681 -75487970 - L1Md_F2 LINE L1 -652 5930 4970 3 735 4484 93 6 17 chr17 19784681 19785338 -75487313 + L1Md_F2 LINE L1 5932 6581 -1 3 735 20042 145 16 15 chr17 19785338 19790066 -75482585 - L1Md_F2 LINE L1 -908 4969 217 3 735 242 320 89 10 chr17 19790289 19790390 -75482261 + RSINE1 SINE B4 55 163 -2 3 735 391 288 29 16 chr17 19791513 19791714 -75480937 + MYSERV6-int LTR ERVK 1597 1770 -7189 3 736 1420 236 18 3 chr17 19791912 19792239 -75480412 + ORR1A1 LTR MaLR 6 337 -9 3 736 1499 323 69 60 chr17 19792353 19793899 -75478752 + MYSERV6-int LTR ERVK 1327 2886 -6073 3 736 476 295 65 16 chr17 19793916 19794164 -75478487 + MurERV4_19-int LTR ERVK 4580 4839 -941 3 736 320 332 66 49 chr17 19794660 19794904 -75477747 + MurERV4_19-int LTR ERVK 4843 5090 -1460 3 736 272 257 109 78 chr17 19794907 19795100 -75477551 + RMER4B LTR ERVK 242 547 -38 3 736 1160 191 35 24 chr17 19795501 19795725 -75476926 - SYNREP_MM Satellite Satellite -45 226 1 3 736 3330 101 45 0 chr17 19795746 19796251 -75476400 + RLTR22_Mus LTR ERVK 296 823 -985 3 736 357 299 59 39 chr17 19796482 19796635 -75476016 + RMER12 LTR ERVK 1101 1256 -66 3 736 1283 158 13 0 chr17 19798495 19798723 -75473928 + L1_Mus4 LINE L1 6405 6635 -1 3 736 21 36 0 0 chr17 19798878 19798906 -75473745 + AT_rich Low_complexity Low_complexity 1 28 0 3 736 250 248 73 9 chr17 19800736 19800846 -75471805 + Lx9 LINE L1 7522 7638 -6 3 736 26 50 0 0 chr17 19800851 19800891 -75471760 + AT_rich Low_complexity Low_complexity 1 40 0 3 736 31 58 0 0 chr17 19801045 19801097 -75471554 + AT_rich Low_complexity Low_complexity 1 52 0 3 736 4052 179 29 27 chr17 19801771 19802624 -75470027 + RLTR22_Mur LTR ERVK 1 855 -993 3 736 198 156 0 0 chr17 19803435 19803480 -75469171 + T-rich Low_complexity Low_complexity 1 45 0 3 736 390 21 0 0 chr17 19804211 19804258 -75468393 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 736 198 0 0 0 chr17 19804258 19804279 -75468372 + (TA)n Simple_repeat Simple_repeat 2 23 0 3 736 631 300 126 19 chr17 19805744 19806084 -75466567 + ORR1B1 LTR MaLR 5 374 0 3 736 547 292 84 40 chr17 19806085 19806467 -75466184 + ORR1B1-int LTR MaLR 2 419 -951 3 736 906 122 14 7 chr17 19806476 19806616 -75466035 + B1_Mus1 SINE Alu 7 147 -1 3 736 414 255 51 76 chr17 19806479 19806636 -75466015 + B4A SINE B4 94 246 -46 3 736 619 184 7 7 chr17 19806636 19806778 -75465873 + GA-rich Low_complexity Low_complexity 3 144 0 3 736 428 294 45 15 chr17 19806778 19806978 -75465673 + ORR1B1-int LTR MaLR 409 614 -895 3 736 28142 111 16 8 chr17 19807041 19812108 -75460543 + L1Md_F LINE L1 380 5482 -401 3 736 239 277 29 150 chr17 19812634 19812677 -75459974 + MT2B LTR ERVL 128 153 -448 3 736 334 347 16 16 chr17 19812677 19812800 -75459851 + B1_Mm SINE Alu 1 123 -24 3 736 27 62 0 0 chr17 19813455 19813503 -75459148 + AT_rich Low_complexity Low_complexity 1 48 0 3 736 233 224 0 0 chr17 19816848 19816897 -75455754 - MTEb LTR MaLR -323 56 8 3 736 3676 242 35 34 chr17 19817139 19818491 -75454160 - Lx2 LINE L1 -2 6995 5706 3 736 39 38 0 0 chr17 19818545 19818598 -75454053 + AT_rich Low_complexity Low_complexity 1 53 0 3 736 201 39 0 0 chr17 19818603 19818629 -75454022 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3 736 1084 93 0 0 chr17 19818629 19818768 -75453883 - B1_Mus2 SINE Alu -8 139 1 3 736 10935 160 26 20 chr17 19818774 19821735 -75450916 - L1_Mus3 LINE L1 0 6638 3653 3 736 303 326 65 43 chr17 19822439 19822625 -75450026 - Lx8 LINE L1 -237 7236 7047 3 736 440 336 13 73 chr17 19822722 19822956 -75449695 + ORR1C2 LTR MaLR 83 302 -82 3 736 324 0 0 0 chr17 19822972 19823008 -75449643 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 3 736 2440 217 35 13 chr17 19823066 19823734 -75448917 - Lx2 LINE L1 -989 5984 5310 3 736 576 199 51 0 chr17 19823725 19823881 -75448770 - Lx2 LINE L1 -888 4998 4835 3 736 276 170 0 0 chr17 19823881 19823934 -75448717 + CT-rich Low_complexity Low_complexity 2 54 0 3 736 1015 121 23 0 chr17 19823965 19824139 -75448512 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 3 736 4552 196 19 22 chr17 19824143 19825227 -75447424 - Lx2 LINE L1 -1020 4866 3787 3 736 1627 229 32 2 chr17 19825221 19825629 -75447022 + L1_Mur2 LINE L1 4203 4622 -1255 3 736 534 31 0 0 chr17 19825728 19825792 -75446859 + (CA)n Simple_repeat Simple_repeat 1 64 0 3 736 1191 264 19 3 chr17 19826087 19826395 -75446256 - ORR1A2 LTR MaLR -8 318 6 3 736 4898 212 40 13 chr17 19826400 19827539 -75445112 - ORR1A2-int LTR MaLR 0 1963 795 3 736 316 236 16 155 chr17 19827497 19827671 -75444980 - MT2B LTR ERVL -319 282 154 3 736 1692 291 71 75 chr17 19827706 19828689 -75443962 - RMER17B LTR ERVK -26 834 1 3 736 623 242 94 0 chr17 19828690 19828839 -75443812 - MT2B LTR ERVL -387 214 52 3 736 2299 268 45 13 chr17 19828740 19829444 -75443207 - ORR1A2-int LTR MaLR -1235 728 2 3 736 1455 220 32 3 chr17 19829445 19829759 -75442892 - ORR1A2 LTR MaLR 0 327 5 3 736 23 33 0 0 chr17 19829759 19829789 -75442862 + AT_rich Low_complexity Low_complexity 1 30 0 3 736 26 0 0 0 chr17 19829849 19829875 -75442776 + AT_rich Low_complexity Low_complexity 1 26 0 3 736 1649 249 89 23 chr17 19832907 19833380 -75439271 - Lx4A LINE L1 -503 6555 6052 3 736 2023 222 92 0 chr17 19833381 19833871 -75438780 + Lx4A LINE L1 6522 7056 -2 3 736 24 32 0 0 chr17 19833871 19833902 -75438749 + AT_rich Low_complexity Low_complexity 1 31 0 3 736 326 332 60 51 chr17 19834127 19834441 -75438210 + Lx9 LINE L1 6956 7272 -372 3 736 1221 106 0 0 chr17 19834452 19834632 -75438019 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 3 736 235 234 20 14 chr17 19834638 19834785 -75437866 + CT-rich Low_complexity Low_complexity 1 148 0 3 736 1246 350 56 47 chr17 19835403 19836355 -75436296 - RMER1B Other Other -6 1060 38 3 736 21 36 0 0 chr17 19836525 19836553 -75436098 + AT_rich Low_complexity Low_complexity 1 28 0 3 736 502 365 5 15 chr17 19836565 19836760 -75435891 - Lx5 LINE L1 -27 7023 6831 3 736 340 339 102 57 chr17 19837991 19838395 -75434256 + L1M2 LINE L1 4853 5274 -869 3 736 269 273 48 27 chr17 19838453 19838600 -75434051 + L1M2 LINE L1 5336 5485 -815 3 736 401 229 12 0 chr17 19838874 19838890 -75433761 + B4 SINE B4 70 86 -206 3 736 480 102 0 2 chr17 19838890 19838970 -75433681 + B1_Mus2 SINE Alu 2 80 -69 3 736 535 176 0 10 chr17 19839023 19839126 -75433525 + Lx4B LINE L1 5689 5790 -87 3 736 6851 169 22 26 chr17 19839124 19840335 -75432316 + Lx3_Mus LINE L1 5296 6520 -489 3 736 669 13 0 0 chr17 19840335 19840413 -75432238 + (CATAA)n Simple_repeat Simple_repeat 5 82 0 3 736 6851 170 37 51 chr17 19840413 19840723 -75431928 + Lx3_Mus LINE L1 6521 6775 -234 3 736 921 62 0 0 chr17 19840723 19840852 -75431799 + (CA)n Simple_repeat Simple_repeat 2 130 0 3 736 6851 170 37 51 chr17 19840852 19841067 -75431584 + Lx3_Mus LINE L1 6776 7008 -1 3 736 2355 288 33 8 chr17 19841081 19841865 -75430786 + Lx4B LINE L1 5783 6586 -472 3 736 1882 285 29 20 chr17 19841896 19842838 -75429813 + L1_Mur3 LINE L1 1071 2019 -3858 3 736 4215 165 86 12 chr17 19842863 19843690 -75428961 + RMER17A2 LTR ERVK 1 888 -18 3 736 648 38 0 0 chr17 19843692 19843771 -75428880 + (CCA)n Simple_repeat Simple_repeat 1 79 0 3 736 3011 263 55 18 chr17 19843784 19844695 -75427956 + L1_Mur3 LINE L1 2062 2994 -2883 3 736 576 0 0 0 chr17 19844695 19844759 -75427892 + (TA)n Simple_repeat Simple_repeat 2 65 0 3 736 3011 263 55 18 chr17 19844759 19845095 -75427556 + L1_Mur3 LINE L1 2995 3355 -2522 3 736 1508 188 4 8 chr17 19845106 19845370 -75427281 + ORR1A2 LTR MaLR 3 320 -64 3 736 5551 81 13 7 chr17 19845370 19846143 -75426508 - L1Md_F2 LINE L1 -3 6579 5802 3 736 485 258 70 150 chr17 19846143 19846205 -75426446 + ORR1A2 LTR MaLR 321 357 -27 3 736 335 104 0 0 chr17 19846205 19846253 -75426398 - Lx2 LINE L1 -1105 5892 5845 3 736 1553 203 22 0 chr17 19846254 19846574 -75426077 + ORR1A2 LTR MaLR 1 327 0 3 736 1469 224 16 9 chr17 19846574 19846894 -75425757 + ORR1A2-int LTR MaLR 1 322 -1641 3 736 4348 267 77 11 chr17 19846898 19848571 -75424080 + L1_Mur3 LINE L1 3405 5186 -691 3 736 362 157 12 0 chr17 19848585 19848668 -75423983 + (TA)n Simple_repeat Simple_repeat 2 85 0 3 736 391 200 0 43 chr17 19848723 19848817 -75423834 + ORR1A3-int LTR MaLR 233 322 -1641 3 736 1126 270 76 33 chr17 19848822 19849335 -75423316 + L1_Mur2 LINE L1 3406 3940 -1937 3 736 2564 252 36 9 chr17 19849337 19849550 -75423101 - Lx4A LINE L1 -22 7036 6820 3 736 825 11 0 0 chr17 19849550 19849644 -75423007 + (TC)n Simple_repeat Simple_repeat 1 94 0 3 736 2564 252 36 9 chr17 19849644 19850099 -75422552 - Lx4A LINE L1 -239 6819 6352 3 736 4761 186 88 19 chr17 19850131 19850690 -75421961 + L1_Mur2 LINE L1 1471 2063 -3814 3 736 387 0 0 0 chr17 19850690 19850733 -75421918 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 736 4761 186 88 19 chr17 19850733 19850772 -75421879 + L1_Mur2 LINE L1 2064 2117 -3760 3 736 315 0 0 0 chr17 19850772 19850807 -75421844 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 736 4761 186 88 19 chr17 19850807 19851486 -75421165 + L1_Mur2 LINE L1 2118 2836 -3041 3 736 348 191 158 83 chr17 19851545 19851665 -75420986 + RMER4A LTR ERVK 258 386 -80 4 736 834 302 74 50 chr17 19852500 19853125 -75419526 + MYSERV6-int LTR ERVK 8186 8693 -266 4 736 312 282 53 7 chr17 19853273 19853423 -75419228 + MYSERV-int LTR ERVK 6369 6525 -25 4 736 393 22 0 0 chr17 19855994 19856040 -75416611 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 736 336 269 0 0 chr17 19856060 19856153 -75416498 + (TG)n Simple_repeat Simple_repeat 2 94 0 4 736 292 255 54 9 chr17 19856183 19856294 -75416357 + Lx9 LINE L1 7522 7637 -7 4 736 14499 186 16 14 chr17 19856677 19860475 -75412176 - L1_Mus4 LINE L1 -2 6634 2830 4 736 432 0 0 0 chr17 19860475 19860523 -75412128 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 736 997 341 17 52 chr17 19860539 19860701 -75411950 + L1VL4 LINE L1 14 162 -6140 4 736 4763 53 3 2 chr17 19860701 19861287 -75411364 - LTRIS_Mus LTR ERV1 0 587 1 4 736 997 341 17 52 chr17 19861287 19861779 -75410872 + L1VL4 LINE L1 163 645 -5657 4 736 239 186 0 0 chr17 19861779 19861822 -75410829 - MT2B LTR ERVL -506 95 53 4 736 2347 245 25 22 chr17 19861845 19862437 -75410214 - ORR1A3-int LTR MaLR -1368 595 2 4 736 1492 223 19 6 chr17 19862438 19862749 -75409902 - ORR1A3 LTR MaLR 0 326 12 4 736 22 35 0 0 chr17 19862753 19862782 -75409869 + AT_rich Low_complexity Low_complexity 1 29 0 4 736 29 28 0 0 chr17 19862790 19862826 -75409825 + AT_rich Low_complexity Low_complexity 1 36 0 4 736 2485 44 3 6 chr17 19863024 19863342 -75409309 - L1Md_F2 LINE L1 0 6582 6266 4 736 21 36 0 0 chr17 19865401 19865429 -75407222 + AT_rich Low_complexity Low_complexity 1 28 0 4 736 189 0 0 0 chr17 19866969 19866990 -75405661 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 4 736 213 39 0 0 chr17 19867078 19867104 -75405547 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 4 736 544 316 54 5 chr17 19867493 19867720 -75404931 - Lx3C LINE L1 -6 7052 6741 4 736 432 213 58 26 chr17 19867706 19867860 -75404791 - Lx3C LINE L1 -436 6540 6382 4 736 1126 231 130 7 chr17 19868137 19868438 -75404213 - Lx4A LINE L1 -503 6555 6218 4 736 7102 77 25 3 chr17 19868439 19868505 -75404146 - L1Md_F2 LINE L1 -12 6570 6505 4 736 183 80 0 0 chr17 19868505 19868530 -75404121 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 4 736 7102 70 13 2 chr17 19868530 19869800 -75402851 - L1Md_F2 LINE L1 -78 6504 5214 4 736 595 222 27 81 chr17 19869839 19870025 -75402626 - Lx4A LINE L1 -828 6230 6055 4 736 1889 234 94 0 chr17 19870029 19870516 -75402135 + Lx4A LINE L1 6522 7054 -4 4 736 25 31 0 0 chr17 19870516 19870548 -75402103 + AT_rich Low_complexity Low_complexity 1 32 0 4 736 230 299 37 0 chr17 19870801 19870908 -75401743 + Lx9 LINE L1 6979 7089 -555 4 736 880 155 6 11 chr17 19871096 19871272 -75401379 + T-rich Low_complexity Low_complexity 2 176 0 4 736 263 213 13 0 chr17 19871314 19871389 -75401262 + CT-rich Low_complexity Low_complexity 1 76 0 4 736 29386 113 13 17 chr17 19872042 19876656 -75395995 + L1Md_F2 LINE L1 654 5234 -649 4 736 849 76 0 0 chr17 19876656 19876787 -75395864 + (TA)n Simple_repeat Simple_repeat 1 131 0 4 736 29386 102 8 7 chr17 19876787 19877127 -75395524 + L1Md_F2 LINE L1 5235 5585 -298 4 736 6866 97 14 4 chr17 19877128 19878094 -75394557 + L1Md_F2 LINE L1 5588 6563 -19 4 736 189 0 0 0 chr17 19878097 19878118 -75394533 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 4 736 1306 349 69 17 chr17 19878118 19878986 -75393665 - RMER1B Other Other -13 1053 85 4 736 213 135 27 0 chr17 19879045 19879082 -75393569 + T-rich Low_complexity Low_complexity 3 40 0 4 736 25 31 0 0 chr17 19879149 19879181 -75393470 + AT_rich Low_complexity Low_complexity 1 32 0 4 736 507 368 5 15 chr17 19879184 19879388 -75393263 - Lx5 LINE L1 -18 7032 6831 4 736 315 322 41 7 chr17 19880848 19880995 -75391656 + L1M2 LINE L1 5123 5274 -869 4 736 232 288 37 29 chr17 19881062 19881198 -75391453 + L1M2 LINE L1 5346 5482 -818 4 736 4211 161 88 14 chr17 19881825 19883040 -75389611 + Lx3_Mus LINE L1 5264 6527 -482 4 736 313 70 17 17 chr17 19883042 19883100 -75389551 + (CAAAA)n Simple_repeat Simple_repeat 3 60 0 4 736 267 154 9 103 chr17 19883104 19883220 -75389431 + A-rich Low_complexity Low_complexity 2 106 0 4 736 350 188 0 0 chr17 19883236 19883305 -75389346 + Lx3_Mus LINE L1 6530 6598 -383 4 736 274 43 64 0 chr17 19883307 19883354 -75389297 + (TTTTTG)n Simple_repeat Simple_repeat 5 54 0 4 736 1031 115 0 20 chr17 19883361 19883512 -75389139 - B1_Mus1 SINE Alu 0 148 1 4 736 207 69 0 0 chr17 19883730 19883759 -75388892 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 736 330 263 11 0 chr17 19883778 19883873 -75388778 + (TG)n Simple_repeat Simple_repeat 1 96 0 4 736 312 255 54 9 chr17 19883902 19884013 -75388638 + Lx9 LINE L1 7522 7637 -7 4 736 15102 175 16 8 chr17 19884404 19888202 -75384449 - L1_Mus4 LINE L1 -2 6634 2812 4 736 1431 317 11 51 chr17 19888196 19888924 -75383727 + L1VL4 LINE L1 6 704 -5598 4 736 452 264 0 0 chr17 19888938 19889048 -75383603 - Lx4A LINE L1 -611 6447 6338 4 736 5163 195 60 11 chr17 19889054 19889606 -75383045 + L1_Mur2 LINE L1 1463 2071 -3806 4 736 576 0 0 0 chr17 19889606 19889670 -75382981 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 736 5163 195 60 11 chr17 19889670 19890410 -75382241 + L1_Mur2 LINE L1 2072 2818 -3059 4 736 2987 201 76 8 chr17 19890444 19891092 -75381559 + RLTR17 LTR ERVK 1 692 0 4 736 273 198 0 95 chr17 19891101 19891196 -75381455 + L1_Mur2 LINE L1 5204 5289 -588 4 736 327 188 0 12 chr17 19891407 19891493 -75381158 - Lx2A LINE L1 0 7008 6924 4 736 7172 196 16 14 chr17 19891494 19893176 -75379475 - Lx2A LINE L1 -41 6967 5287 4 736 26537 142 14 9 chr17 19893168 19899553 -75373098 - L1_Mus3 LINE L1 -7 6631 217 4 736 501 58 0 0 chr17 19899878 19899947 -75372704 + (CA)n Simple_repeat Simple_repeat 1 69 0 4 736 284 342 119 44 chr17 19900498 19900657 -75371994 - MTE2a LTR MaLR -5 374 204 4 736 310 286 35 23 chr17 19901058 19901230 -75371421 + MYSERV6-int LTR ERVK 1597 1770 -7189 4 736 1326 237 18 61 chr17 19901454 19901782 -75370869 + ORR1A2 LTR MaLR 6 319 -8 4 736 905 332 60 37 chr17 19902223 19903012 -75369639 + MYSERV6-int LTR ERVK 1644 2450 -6509 4 736 10063 105 24 26 chr17 19903021 19905354 -75367297 + L1Md_F LINE L1 356 2684 -3199 4 736 561 259 17 0 chr17 19905354 19905528 -75367123 + MYSERV6-int LTR ERVK 3269 3445 -1815 4 736 384 320 44 28 chr17 19905538 19905718 -75366933 + MYSERV6-int LTR ERVK 4677 4859 -401 4 736 388 335 82 51 chr17 19906289 19906544 -75366107 + MYSERV6-int LTR ERVK 4843 5105 -1445 4 736 506 234 76 76 chr17 19906554 19906731 -75365920 + RMER4A LTR ERVK 252 547 -38 4 736 288 0 0 0 chr17 19907208 19907240 -75365411 + (T)n Simple_repeat Simple_repeat 1 32 0 4 736 620 288 70 45 chr17 19907412 19907941 -75364710 + MYSERV6-int LTR ERVK 8120 8511 -448 4 736 317 209 77 0 chr17 19908268 19908359 -75364292 + MYSERV6-int LTR ERVK 8801 8898 -61 4 736 5546 103 1 26 chr17 19908360 19909204 -75363447 + RLTR22_Mus LTR ERVK 1 823 -985 4 736 299 276 201 52 chr17 19909379 19909608 -75363043 + RMER12 LTR ERVK 998 1260 -62 4 736 210 37 0 0 chr17 19911106 19911133 -75361518 + (TTGG)n Simple_repeat Simple_repeat 2 28 0 4 736 992 109 0 0 chr17 19911133 19911271 -75361380 - B1_Mus1 SINE Alu -8 140 3 4 736 1262 152 4 4 chr17 19911632 19911863 -75360788 + L1_Mus4 LINE L1 6405 6635 -1 4 736 28 29 0 0 chr17 19912063 19912098 -75360553 + AT_rich Low_complexity Low_complexity 1 35 0 4 736 470 31 16 0 chr17 19913823 19913887 -75358764 + (TG)n Simple_repeat Simple_repeat 2 66 0 4 736 27 62 0 0 chr17 19914013 19914061 -75358590 + AT_rich Low_complexity Low_complexity 1 48 0 4 736 29 60 0 0 chr17 19914212 19914262 -75358389 + AT_rich Low_complexity Low_complexity 1 50 0 4 736 222 343 0 29 chr17 19914711 19914780 -75357871 - B3 SINE B2 -108 108 42 4 736 297 0 0 0 chr17 19914780 19914813 -75357838 + (A)n Simple_repeat Simple_repeat 1 33 0 4 736 24 0 0 0 chr17 19914877 19914901 -75357750 + AT_rich Low_complexity Low_complexity 1 24 0 4 736 2758 203 17 14 chr17 19914989 19915582 -75357069 + RLTR22_Mur LTR ERVK 1 595 -1253 4 736 541 124 4 2 chr17 19915600 19915693 -75356958 - B1_Mus2 SINE Alu -3 117 24 4 736 1341 169 7 43 chr17 19915703 19915982 -75356669 + RLTR22_Mur LTR ERVK 604 872 -976 4 736 784 267 123 14 chr17 19916571 19916848 -75355803 - ORR1B1 LTR MaLR -83 311 5 4 736 486 0 0 0 chr17 19918242 19918296 -75354355 + (TA)n Simple_repeat Simple_repeat 1 54 0 4 736 180 111 0 0 chr17 19918511 19918538 -75354113 + (T)n Simple_repeat Simple_repeat 1 27 0 4 11 34917 75 9 4 chr17 19919495 19925611 -75347040 - L1Md_F3 LINE L1 -33 6551 410 4 737 688 290 112 34 chr17 19925666 19926051 -75346600 + ORR1B1-int LTR MaLR 1 415 -1094 4 737 815 161 0 7 chr17 19926062 19926206 -75346445 + B1_Mus1 SINE Alu 6 148 0 4 737 424 235 12 0 chr17 19926206 19926368 -75346283 + A-rich Low_complexity Low_complexity 3 166 0 4 737 383 265 134 32 chr17 19926368 19926555 -75346096 + ORR1B1-int LTR MaLR 409 614 -895 4 737 2695 264 24 4 chr17 19926643 19927348 -75345303 + ORR1B1-int LTR MaLR 791 1509 0 4 737 665 286 23 9 chr17 19927348 19927567 -75345084 + ORR1B1 LTR MaLR 1 222 -172 4 737 740 251 6 0 chr17 19928124 19928299 -75344352 + ORR1B1 LTR MaLR 211 386 -8 4 737 238 252 31 146 chr17 19928830 19928876 -75343775 + MT2B2 LTR ERVL 125 155 -429 4 737 364 302 40 40 chr17 19928876 19929000 -75343651 + B1_Mm SINE Alu 1 124 -23 4 737 26 74 0 0 chr17 19929675 19929729 -75342922 + AT_rich Low_complexity Low_complexity 1 54 0 4 737 31 0 0 0 chr17 19931836 19931867 -75340784 + AT_rich Low_complexity Low_complexity 1 31 0 4 737 3129 56 5 2 chr17 19932420 19932813 -75339838 - MTA_Mm LTR MaLR 0 396 3 4 737 7701 90 8 5 chr17 19932815 19933909 -75338742 - MTA_Mm-int LTR MaLR 0 1098 1 4 737 2977 71 8 13 chr17 19933909 19934307 -75338344 - MTA_Mm LTR MaLR 0 396 1 4 737 3990 228 57 83 chr17 19935184 19936512 -75336139 - Lx2 LINE L1 -2 6995 5703 4 737 978 105 14 0 chr17 19936609 19936752 -75335899 - B1_Mus2 SINE Alu -2 145 1 4 737 11049 169 24 3 chr17 19936761 19939681 -75332970 - L1_Mus3 LINE L1 -3 6635 3653 4 737 8128 42 3 3 chr17 19939930 19940923 -75331728 - L1Md_F2 LINE L1 -2 6580 5588 4 737 1453 40 0 62 chr17 19940970 19941181 -75331470 - L1Md_F3 LINE L1 -1 6583 6386 4 737 344 359 53 40 chr17 19941560 19941807 -75330844 - Lx8 LINE L1 -196 7277 7028 4 737 519 348 9 35 chr17 19941891 19942120 -75330531 + ORR1C2 LTR MaLR 86 308 -76 4 737 749 41 0 10 chr17 19942121 19942219 -75330432 + (TTTA)n Simple_repeat Simple_repeat 2 98 0 4 737 3582 219 148 12 chr17 19942231 19943639 -75329012 - Lx3B LINE L1 -1002 5974 4336 4 737 1306 248 19 7 chr17 19943847 19944156 -75328495 - ORR1A3 LTR MaLR -8 318 6 4 737 4532 236 47 12 chr17 19944161 19945364 -75327287 - ORR1A3-int LTR MaLR 0 1963 718 4 737 280 156 0 0 chr17 19945372 19945417 -75327234 - MT2B LTR ERVL -347 254 210 4 737 1676 288 45 92 chr17 19945450 19946393 -75326258 - RMER17B LTR ERVK -37 871 8 4 737 542 280 93 0 chr17 19946407 19946557 -75326094 - MT2B LTR ERVL -386 215 52 4 737 2360 237 111 8 chr17 19946516 19947154 -75325497 - ORR1A3-int LTR MaLR -1258 705 2 4 737 308 157 0 0 chr17 19947158 19947209 -75325442 - ORR1A3 LTR MaLR -7 319 269 4 737 355 145 24 0 chr17 19947210 19947293 -75325358 + (TA)n Simple_repeat Simple_repeat 1 85 0 4 737 1231 249 15 0 chr17 19947293 19947562 -75325089 - ORR1A3 LTR MaLR -54 273 1 4 737 25 0 0 0 chr17 19947564 19947589 -75325062 + AT_rich Low_complexity Low_complexity 1 25 0 4 737 23 54 0 0 chr17 19950398 19950435 -75322216 + AT_rich Low_complexity Low_complexity 1 37 0 4 737 488 309 57 7 chr17 19951912 19952132 -75320519 - Lx3C LINE L1 -4 7054 6743 5 737 451 230 45 13 chr17 19952120 19952274 -75320377 - Lx3C LINE L1 -436 6540 6382 5 737 1822 235 87 28 chr17 19952550 19953023 -75319628 - Lx4A LINE L1 -503 6555 6055 5 737 1958 214 105 2 chr17 19953046 19953514 -75319137 + Lx4A LINE L1 6541 7056 -2 5 737 209 133 0 62 chr17 19953514 19953562 -75319089 + A-rich Low_complexity Low_complexity 1 45 0 5 737 1369 367 56 12 chr17 19954439 19955395 -75317256 - RMER1A Other Other -9 1057 3 5 737 25 31 0 0 chr17 19955517 19955549 -75317102 + AT_rich Low_complexity Low_complexity 1 32 0 5 737 493 368 5 15 chr17 19955552 19955756 -75316895 - Lx5 LINE L1 -18 7032 6831 5 737 225 288 37 29 chr17 19957472 19957608 -75315043 + L1M1 LINE L1 5346 5482 -818 5 737 242 282 59 104 chr17 19957738 19957940 -75314711 + Lx7 LINE L1 5603 5795 -1901 5 737 216 130 0 0 chr17 19958218 19958264 -75314387 + (CAAA)n Simple_repeat Simple_repeat 1 46 0 5 737 459 194 0 0 chr17 19958376 19958469 -75314182 + Lx4B LINE L1 5689 5781 -96 5 737 4487 163 21 51 chr17 19958477 19959712 -75312939 + Lx3A LINE L1 5296 6507 -474 5 737 367 72 16 83 chr17 19959713 19959834 -75312817 + A-rich Low_complexity Low_complexity 3 115 0 5 737 197 140 0 23 chr17 19959898 19959942 -75312709 + (CTAA)n Simple_repeat Simple_repeat 3 45 0 5 737 504 234 0 0 chr17 19959958 19960069 -75312582 + Lx3A LINE L1 6539 6649 -360 5 737 13241 78 2 4 chr17 19960060 19961861 -75310790 + L1Md_F2 LINE L1 3790 5586 -297 5 737 7891 48 5 1 chr17 19961861 19962841 -75309810 + L1Md_F2 LINE L1 5587 6570 -12 5 737 1552 217 60 6 chr17 19962843 19962980 -75309671 + Lx3A LINE L1 6639 6775 -234 5 737 483 18 0 0 chr17 19962980 19963036 -75309615 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 737 1552 217 60 6 chr17 19963036 19963250 -75309401 + Lx3A LINE L1 6776 7007 -2 5 737 2180 274 53 12 chr17 19963265 19964037 -75308614 + Lx4B LINE L1 5783 6586 -472 5 737 1834 283 32 21 chr17 19964067 19965006 -75307645 + L1_Mur3 LINE L1 1071 2019 -3858 5 737 3817 168 130 9 chr17 19965032 19965832 -75306819 + RMER17A2 LTR ERVK 1 897 -9 5 737 453 36 0 0 chr17 19965842 19965897 -75306754 + (CA)n Simple_repeat Simple_repeat 1 55 0 5 737 3536 10 2 0 chr17 19965958 19966353 -75306298 - MTA_Mm LTR MaLR 0 396 1 5 737 9594 15 2 1 chr17 19966353 19967450 -75305201 - MTA_Mm-int LTR MaLR 0 1098 1 5 737 3536 10 2 0 chr17 19967450 19967845 -75304806 - MTA_Mm LTR MaLR 0 396 1 5 737 2815 259 61 19 chr17 19967890 19969063 -75303588 + L1_Mur3 LINE L1 2148 3370 -2507 5 737 1709 170 4 0 chr17 19969080 19969356 -75303295 + ORR1A2 LTR MaLR 10 286 -41 5 737 323 177 0 0 chr17 19969356 19969418 -75303233 - Lx2A LINE L1 -1102 5906 5845 5 737 1734 176 12 0 chr17 19969419 19969742 -75302909 + ORR1A2 LTR MaLR 1 327 0 5 737 1411 199 11 88 chr17 19969742 19970105 -75302546 + ORR1A2-int LTR MaLR 1 335 -1628 5 737 3330 243 97 15 chr17 19970106 19971310 -75301341 + L1_Mur3 LINE L1 3417 4719 -1158 5 737 771 224 0 0 chr17 19971310 19971489 -75301162 + (TA)n Simple_repeat Simple_repeat 2 180 0 5 737 870 162 0 0 chr17 19971454 19971633 -75301018 + (TATG)n Simple_repeat Simple_repeat 2 180 0 5 737 643 268 42 18 chr17 19971642 19971927 -75300724 + L1_Mur3 LINE L1 4895 5186 -691 5 737 500 30 0 15 chr17 19971940 19972007 -75300644 + (TA)n Simple_repeat Simple_repeat 2 67 0 5 737 1030 270 52 21 chr17 19972024 19972254 -75300397 - Lx4A LINE L1 -8 7050 6810 5 737 540 0 0 0 chr17 19972254 19972314 -75300337 + (TC)n Simple_repeat Simple_repeat 1 60 0 5 737 1030 270 52 21 chr17 19972314 19972408 -75300243 - Lx4A LINE L1 -249 6809 6716 5 737 2350 184 66 19 chr17 19972412 19973006 -75299645 + L1_Mur2 LINE L1 2217 2838 -3039 5 737 348 282 126 66 chr17 19973068 19973140 -75299511 + RMER4A LTR ERVK 263 349 -117 5 737 591 15 0 0 chr17 19973140 19973208 -75299443 + (TC)n Simple_repeat Simple_repeat 1 68 0 5 737 348 282 126 66 chr17 19973208 19973302 -75299349 + RMER4A LTR ERVK 350 439 -27 5 737 595 306 86 37 chr17 19974159 19974669 -75297982 + MYSERV-int LTR ERVK 5731 6265 -285 5 737 305 277 15 23 chr17 19974831 19974964 -75297687 + MYSERV-int LTR ERVK 6411 6542 -8 5 737 270 39 38 38 chr17 19978404 19978457 -75294194 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 5 737 1134 82 7 0 chr17 19978463 19978610 -75294041 - B1_Mus1 SINE Alu 0 148 1 5 737 396 304 7 0 chr17 19978832 19978967 -75293684 + (TG)n Simple_repeat Simple_repeat 1 136 0 5 737 229 276 60 8 chr17 19978996 19979113 -75293538 + Lx9 LINE L1 7522 7644 0 5 737 23 0 0 0 chr17 19979135 19979158 -75293493 + AT_rich Low_complexity Low_complexity 1 23 0 5 737 23 0 0 0 chr17 19979473 19979496 -75293155 + AT_rich Low_complexity Low_complexity 1 23 0 5 737 10697 90 34 2 chr17 19979504 19980915 -75291736 - L1Md_F2 LINE L1 -12 6570 5128 5 737 1039 58 29 7 chr17 19980915 19981053 -75291598 - B1_Mus1 SINE Alu -7 141 1 5 737 10697 86 55 1 chr17 19981053 19981861 -75290790 - L1Md_F2 LINE L1 -756 5127 4262 5 737 14690 180 17 9 chr17 19981854 19985432 -75287219 - L1_Mus4 LINE L1 -217 6419 2808 5 737 1077 320 22 48 chr17 19985422 19986012 -75286639 + L1VL4 LINE L1 6 580 -5722 5 737 6071 106 4 14 chr17 19986028 19986936 -75285715 + L1_Mus2 LINE L1 5682 6566 0 5 737 10067 125 17 21 chr17 19986936 19988763 -75283888 + MusHAL1 LINE L1 614 2431 -922 5 737 1008 181 56 22 chr17 19988908 19989139 -75283512 + RLTR22_Mur LTR ERVK 634 872 -976 5 737 237 292 97 43 chr17 19990528 19990621 -75282030 - Lx8 LINE L1 -181 7292 7195 5 737 867 265 150 27 chr17 19990643 19990977 -75281674 + ORR1B1 LTR MaLR 20 394 0 5 737 2661 308 65 56 chr17 19990977 19992327 -75280324 + ORR1B1-int LTR MaLR 1 1363 -7 5 737 437 294 7 0 chr17 19992333 19992469 -75280182 + ORR1B1 LTR MaLR 3 139 -255 5 737 477 174 12 0 chr17 19992467 19992553 -75280098 + ORR1B1 LTR MaLR 300 386 -8 5 737 204 184 0 0 chr17 19993257 19993306 -75279345 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 5 737 682 264 33 13 chr17 19993968 19994118 -75278533 - ETnERV2-int LTR ERVK -190 7216 7064 5 737 1075 75 7 7 chr17 19995099 19995246 -75277405 + B1_Mus2 SINE Alu 1 147 0 5 737 28 0 0 0 chr17 19995254 19995282 -75277369 + AT_rich Low_complexity Low_complexity 1 28 0 5 737 422 299 30 103 chr17 19996276 19996753 -75275898 + L1VL1 LINE L1 40 400 -6022 5 737 397 327 13 0 chr17 19996799 19996958 -75275693 + L1Md_F LINE L1 663 823 -5793 5 737 1030 225 17 0 chr17 19996947 19997187 -75275464 + L1Md_F LINE L1 725 968 -5648 5 737 17090 132 1 5 chr17 19997180 20000000 -75272651 + L1Md_F LINE L1 1341 4149 -1734 5 737 10489 143 9 4 chr17 20000000 20000219 -75272432 + L1_Mus1 LINE L1 4150 4368 -1515 1 737 360 0 0 0 chr17 20000219 20000259 -75272392 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 2 737 10489 119 8 3 chr17 20000259 20002441 -75270210 + L1_Mus1 LINE L1 4369 6566 -1 1 737 455 386 51 71 chr17 20003556 20003910 -75268741 - ORR1D2 LTR MaLR -23 347 1 3 737 24 53 0 0 chr17 20004481 20004519 -75268132 + AT_rich Low_complexity Low_complexity 1 38 0 4 737 4447 174 16 7 chr17 20004519 20005359 -75267292 - Lx2 LINE L1 -5 6992 6146 5 737 545 174 35 26 chr17 20006539 20006664 -75265987 - ORR1A3 LTR MaLR -210 168 6 6 737 5336 225 25 2 chr17 20006669 20007847 -75264804 - ORR1A3-int LTR MaLR 0 1963 760 6 737 914 251 78 22 chr17 20007854 20008086 -75264565 - MT2B LTR ERVL -322 279 35 7 737 2561 219 77 82 chr17 20007939 20008223 -75264428 - ORR1A3-int LTR MaLR -1201 762 488 6 737 1033 116 7 0 chr17 20008223 20008370 -75264281 - B1_Mus1 SINE Alu 0 148 1 8 737 2561 219 77 82 chr17 20008370 20008850 -75263801 - ORR1A3-int LTR MaLR -1476 487 2 6 737 1496 210 22 9 chr17 20008851 20009173 -75263478 - ORR1A3 LTR MaLR 0 326 1 6 737 353 20 41 0 chr17 20009430 20009479 -75263172 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 9 737 946 137 0 0 chr17 20009479 20009618 -75263033 - B1_Mus1 SINE Alu -9 139 1 1 737 770 56 19 0 chr17 20011717 20011824 -75260827 + (TTTC)n Simple_repeat Simple_repeat 3 111 0 1 737 239 0 32 0 chr17 20011845 20011876 -75260775 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 1 737 717 115 26 0 chr17 20011889 20012002 -75260649 - B1_Mus1 SINE Alu 0 148 33 1 737 26 0 0 0 chr17 20012074 20012100 -75260551 + AT_rich Low_complexity Low_complexity 1 26 0 1 737 21 0 0 0 chr17 20012152 20012173 -75260478 + AT_rich Low_complexity Low_complexity 1 21 0 1 737 1306 103 11 0 chr17 20012423 20012608 -75260043 + B2_Mm1t SINE B2 3 189 -4 1 737 4660 202 62 93 chr17 20013235 20014843 -75257808 - RLTR45-int LTR ERVK -1337 5907 4350 1 737 294 217 0 68 chr17 20014880 20014954 -75257697 - RMER16-int LTR ERVK -4867 2539 2471 1 737 400 257 88 0 chr17 20014988 20015101 -75257550 - RLTR19-int LTR ERVK -5077 1060 938 1 737 1237 234 96 53 chr17 20015076 20015594 -75257057 - RMER16-int LTR ERVK -4783 623 251 1 737 299 281 88 92 chr17 20015815 20016120 -75256531 - RMER16-int LTR ERVK -6940 304 1 1 737 545 276 47 16 chr17 20016513 20016642 -75256009 - ETnERV2-int LTR ERVK -204 7202 7070 2 737 379 324 27 0 chr17 20016667 20016815 -75255836 - Lx3B LINE L1 -93 6880 6729 2 737 366 242 21 17 chr17 20016809 20016917 -75255734 - Lx4B LINE L1 -544 6514 6381 2 737 259 173 115 0 chr17 20017223 20017275 -75255376 - Lx4A LINE L1 -504 6554 6497 2 737 1815 157 105 13 chr17 20017275 20017655 -75254996 + RLTR9F LTR ERVK 1 415 0 2 737 8752 170 48 29 chr17 20017657 20020520 -75252131 + ETnERV2-int LTR ERVK 3 4072 -3334 2 737 4557 202 42 31 chr17 20020508 20021270 -75251381 + ETnERV2-int LTR ERVK 5505 5829 -1577 2 737 269 26 0 26 chr17 20021270 20021309 -75251342 + (TTTTA)n Simple_repeat Simple_repeat 2 39 0 2 737 4557 181 22 25 chr17 20021309 20021926 -75250725 + ETnERV2-int LTR ERVK 5830 6406 -1000 2 737 340 147 29 14 chr17 20022149 20022218 -75250433 + ETnERV2-int LTR ERVK 7331 7400 -6 2 737 1919 158 94 5 chr17 20022222 20022603 -75250048 + RLTR9F LTR ERVK 1 415 0 2 737 613 233 93 7 chr17 20022603 20022754 -75249897 - Lx4A LINE L1 -556 6502 6339 2 737 732 278 4 9 chr17 20022769 20022994 -75249657 - Lx4A LINE L1 -783 6275 6052 2 737 2108 218 82 0 chr17 20022995 20023485 -75249166 + Lx4A LINE L1 6520 7049 -9 2 737 25978 78 1 1 chr17 20023496 20027737 -75244914 - L1Md_F2 LINE L1 -14 6568 2330 2 737 849 136 6 99 chr17 20027738 20027910 -75244741 + RLTR6_Mm LTR ERV1 1 156 -498 2 737 527 191 42 71 chr17 20027923 20028185 -75244466 + RLTR6_Mm LTR ERV1 223 447 0 2 737 986 216 60 47 chr17 20028185 20028540 -75244111 + MMVL30-int LTR ERV1 1 347 -7105 2 737 4689 119 44 13 chr17 20028557 20029330 -75243321 + MMVL30-int LTR ERV1 672 1468 -2230 2 737 16776 59 22 19 chr17 20029405 20031764 -75240887 + MMVL30-int LTR ERV1 960 3698 0 3 737 816 148 6 99 chr17 20031764 20031936 -75240715 + RLTR6_Mm LTR ERV1 1 156 -498 3 737 522 181 233 53 chr17 20031949 20032211 -75240440 + RLTR6_Mm LTR ERV1 276 584 -70 3 737 8013 86 1 8 chr17 20032211 20034215 -75238436 - L1Md_Gf LINE L1 -3551 2335 249 3 737 27 29 0 0 chr17 20034215 20034249 -75238402 + AT_rich Low_complexity Low_complexity 1 34 0 3 737 556 297 51 45 chr17 20034485 20034838 -75237813 + Lx9 LINE L1 6981 7335 -309 3 737 232 172 29 86 chr17 20035005 20035075 -75237576 + MTC-int LTR MaLR 999 1064 -194 3 737 276 216 13 13 chr17 20035155 20035230 -75237421 - L1_Mur2 LINE L1 -499 5378 5304 3 737 331 242 20 0 chr17 20035217 20035316 -75237335 - L1_Mur2 LINE L1 -1155 4722 4622 3 737 180 97 0 0 chr17 20035316 20035347 -75237304 + (T)n Simple_repeat Simple_repeat 1 31 0 3 737 3766 244 24 3 chr17 20035361 20036222 -75236429 + Lx4A LINE L1 6129 7007 -51 3 737 306 205 0 0 chr17 20036315 20036398 -75236253 + (TATG)n Simple_repeat Simple_repeat 2 84 0 3 737 21 0 0 0 chr17 20036623 20036644 -75236007 + AT_rich Low_complexity Low_complexity 1 21 0 3 737 287 267 47 0 chr17 20037419 20037505 -75235146 + L1M3 LINE L1 5129 5218 -922 4 737 2575 71 0 0 chr17 20037846 20038184 -75234467 + ORR1A1 LTR MaLR 1 338 -8 4 737 2909 147 63 23 chr17 20038188 20039128 -75233523 + ORR1A1-int LTR MaLR 1 1401 -391 4 737 2387 99 37 0 chr17 20039138 20039490 -75233161 + MERVL-int LTR ERVL 4992 5356 -129 4 737 300 115 82 0 chr17 20039547 20039608 -75233043 + MERVL-int LTR ERVL 5564 5629 -132 4 737 291 181 27 14 chr17 20039608 20039681 -75232970 + ORR1A3-int LTR MaLR 567 640 -1323 4 737 281 53 0 0 chr17 20039681 20039719 -75232932 + MERVL-int LTR ERVL 5448 5485 0 4 737 3356 88 17 2 chr17 20039719 20040187 -75232464 + MT2C_Mm LTR ERVL 1 475 0 4 737 185 65 0 31 chr17 20040718 20040750 -75231901 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 4 737 459 179 45 45 chr17 20040848 20040959 -75231692 + Lx4B LINE L1 5680 5790 -87 4 737 7722 143 21 9 chr17 20040950 20042651 -75230000 + Lx3_Mus LINE L1 5290 7009 0 4 737 2157 244 8 52 chr17 20042655 20043266 -75229385 + Lx4B LINE L1 5783 6366 -692 4 737 386 207 0 3 chr17 20043266 20043358 -75229293 + Lx4A LINE L1 6499 6602 -456 4 737 920 258 86 0 chr17 20043386 20043630 -75229021 + Lx4B LINE L1 6374 6638 -420 4 737 6036 293 35 68 chr17 20043629 20044629 -75228022 + L1_Mur3 LINE L1 1070 2064 -3822 4 737 395 19 19 0 chr17 20044629 20044681 -75227970 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 737 6036 291 39 76 chr17 20044681 20046032 -75226619 + L1_Mur3 LINE L1 2065 3390 -2496 4 737 1674 146 26 68 chr17 20046032 20046371 -75226280 + ORR1A2 LTR MaLR 3 327 0 5 737 6036 291 39 76 chr17 20046371 20046754 -75225897 + L1_Mur3 LINE L1 3391 3638 -2248 4 737 1064 89 7 0 chr17 20046754 20046900 -75225751 - B1_Mus1 SINE Alu -1 147 1 5 737 6036 293 39 74 chr17 20046900 20048445 -75224206 + L1_Mur3 LINE L1 3639 5228 -918 4 737 407 209 0 73 chr17 20048468 20048618 -75224033 - Lx4A LINE L1 0 7058 6920 5 737 3297 71 0 0 chr17 20048618 20049237 -75223414 - RLTR6-int LTR ERV1 -7121 657 1 5 737 1871 191 127 75 chr17 20049238 20049811 -75222840 - RLTR6_Mm LTR ERV1 -51 603 1 5 737 207 0 0 0 chr17 20049825 20049848 -75222803 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 737 222 258 45 26 chr17 20050728 20050883 -75221768 + (TGAG)n Simple_repeat Simple_repeat 3 160 0 5 737 1687 307 36 43 chr17 20051336 20052444 -75220207 + MYSERV6-int LTR ERVK 1654 2753 -6206 5 737 2155 87 48 6 chr17 20052445 20052757 -75219894 + IAPLTR2b LTR ERVK 1 325 -2 5 737 2491 127 11 15 chr17 20052759 20053213 -75219438 + IAPEz-int LTR ERVK 1 577 -5904 5 737 2036 86 0 0 chr17 20053199 20053467 -75219184 + IAPLTR4_I LTR ERVK 915 1182 -288 6 737 376 88 0 0 chr17 20053467 20053524 -75219127 + B1_Mur4 SINE Alu 1 57 -93 6 737 1837 84 4 0 chr17 20053529 20053768 -75218883 + IAPEY3-int LTR ERVK 2258 2497 -5183 6 92 6403 84 8 0 chr17 20053787 20054631 -75218020 + IAPEz-int LTR ERVK 4676 5526 -955 5 738 462 36 0 0 chr17 20054631 20054687 -75217964 + (A)n Simple_repeat Simple_repeat 1 56 0 6 738 7092 76 10 16 chr17 20054751 20055714 -75216937 + IAPEz-int LTR ERVK 5524 6481 0 5 738 2332 66 28 6 chr17 20055714 20056032 -75216619 + IAPLTR2b LTR ERVK 1 325 -2 5 738 276 284 36 22 chr17 20056032 20056169 -75216482 + MYSERV-int LTR ERVK 2472 2610 -3940 6 738 772 289 12 8 chr17 20056180 20056424 -75216227 + MurERV4-int LTR ERVK 4674 4918 -342 6 738 628 296 116 33 chr17 20057054 20057295 -75215356 + MurERV4-int LTR ERVK 4843 5103 -1447 6 738 1510 231 35 146 chr17 20057295 20057484 -75215167 + RLTR31A_Mm LTR ERVK 1 170 -414 6 738 3057 79 72 5 chr17 20057484 20057929 -75214722 + MT2C_Mm LTR ERVL 1 475 0 6 738 2258 158 43 21 chr17 20057939 20058359 -75214292 - Lx LINE L1 -3 6651 6223 6 738 1510 231 35 146 chr17 20058359 20058701 -75213950 + RLTR31A_Mm LTR ERVK 176 483 -101 6 738 420 250 100 61 chr17 20058752 20058824 -75213827 + RMER3D-int LTR ERVK 1 70 -2772 6 738 309 82 0 0 chr17 20058824 20058873 -75213778 + (TATG)n Simple_repeat Simple_repeat 2 50 0 7 738 420 250 100 61 chr17 20058873 20059030 -75213621 + RMER3D-int LTR ERVK 71 239 -2603 6 738 1968 324 46 38 chr17 20059198 20059333 -75213318 + MYSERV6-int LTR ERVK 1641 1716 -7243 7 738 3174 92 67 0 chr17 20059333 20059778 -75212873 - MT2C_Mm LTR ERVL 0 475 1 7 738 1968 312 44 40 chr17 20059778 20060420 -75212231 + MYSERV6-int LTR ERVK 1717 2347 -6612 7 738 2885 86 5 2 chr17 20060420 20060815 -75211836 + MTA_Mm LTR MaLR 1 396 0 7 738 1968 312 44 40 chr17 20060815 20061343 -75211308 + MYSERV6-int LTR ERVK 2348 2900 -6059 7 738 422 300 64 30 chr17 20061346 20061580 -75211071 + MurERV4_19-int LTR ERVK 4580 4821 -959 7 738 344 320 89 58 chr17 20062225 20062484 -75210167 + MurERV4_19-int LTR ERVK 4844 5110 -1440 7 738 344 220 61 55 chr17 20062516 20062659 -75209992 + RMER4A LTR ERVK 314 557 -28 7 738 7611 105 7 1 chr17 20063557 20065076 -75207575 - L1_Mus3 LINE L1 -2 6636 5108 7 738 967 144 7 0 chr17 20065102 20065248 -75207403 - B1_Mus1 SINE Alu 0 148 2 7 738 861 280 23 81 chr17 20065345 20066051 -75206600 + MYSERV6-int LTR ERVK 8322 8905 -54 7 738 1114 229 10 0 chr17 20066079 20066372 -75206279 - L1_Mur1 LINE L1 -1724 4162 3867 7 738 1967 114 26 0 chr17 20066372 20066678 -75205973 - BGLII LTR ERVK 0 421 108 7 738 2974 53 0 0 chr17 20066680 20067037 -75205614 - IAPLTR4_I LTR ERVK 0 357 1 8 738 3303 116 16 29 chr17 20067037 20067770 -75204881 - IAPEY3-int LTR ERVK 0 7581 6907 8 738 438 81 0 16 chr17 20067770 20067833 -75204818 - IAPEY3-int LTR ERVK -2770 4910 4849 8 738 4056 67 4 0 chr17 20067823 20068330 -75204321 - IAPEY3-int LTR ERVK -4991 2689 2181 8 738 3533 151 7 27 chr17 20068316 20069096 -75203555 - IAPLTR4_I LTR ERVK -300 1170 1 8 738 2594 65 62 0 chr17 20069096 20069432 -75203219 - IAPLTR4_I LTR ERVK 0 357 1 8 738 725 126 0 0 chr17 20069432 20069543 -75203108 - BGLII LTR ERVK -310 111 1 7 738 2873 224 104 10 chr17 20069543 20070485 -75202166 - MYSERV16_I-int LTR ERVK 0 2326 1296 7 738 475 213 48 28 chr17 20070494 20070639 -75202012 - RMER3D-int LTR ERVK -1163 1679 1532 8 738 2029 254 57 69 chr17 20070671 20071183 -75201468 - RMER3D-int LTR ERVK -1309 1533 1018 8 738 885 37 0 0 chr17 20071183 20071292 -75201359 + (TTTCC)n Simple_repeat Simple_repeat 4 112 0 8 738 2029 254 57 69 chr17 20071292 20071679 -75200972 - RMER3D-int LTR ERVK -1825 1017 645 8 738 2369 143 16 24 chr17 20071773 20072197 -75200454 - BGLII LTR ERVK 0 421 1 8 738 311 169 78 0 chr17 20072201 20072278 -75200373 - L1_Mur1 LINE L1 -2018 3859 3777 7 738 1218 223 19 16 chr17 20072282 20072592 -75200059 + L1_Mur2 LINE L1 4210 4520 -1357 8 738 985 207 14 0 chr17 20072605 20072827 -75199824 - ORR1A3-int LTR MaLR -1737 226 2 8 738 1510 201 40 25 chr17 20072828 20073149 -75199502 - ORR1A3 LTR MaLR 0 326 1 8 738 25 51 0 0 chr17 20076018 20076057 -75196594 + AT_rich Low_complexity Low_complexity 1 39 0 8 738 22 70 0 0 chr17 20076156 20076199 -75196452 + AT_rich Low_complexity Low_complexity 1 43 0 8 738 231 345 9 9 chr17 20076364 20076478 -75196173 + Lx9 LINE L1 6804 6917 -727 8 738 24 0 0 0 chr17 20077298 20077322 -75195329 + AT_rich Low_complexity Low_complexity 1 24 0 8 738 442 279 48 13 chr17 20077539 20077744 -75194907 - Lx4A LINE L1 -7 7051 6745 9 738 457 260 45 7 chr17 20077733 20077888 -75194763 - Lx2B LINE L1 -463 6537 6377 9 738 2181 206 81 6 chr17 20078151 20078620 -75194031 - Lx4A LINE L1 -502 6556 6053 9 738 1843 216 137 2 chr17 20078644 20079098 -75193553 + Lx4A LINE L1 6542 7056 -2 9 738 465 335 11 0 chr17 20079302 20079484 -75193167 + Lx9 LINE L1 6912 7095 -549 8 738 3366 189 11 42 chr17 20079526 20080279 -75192372 - L1_Mur2 LINE L1 -478 5399 4666 9 738 216 0 0 0 chr17 20080279 20080303 -75192348 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9 738 1026 103 0 0 chr17 20080303 20080439 -75192212 - B1_Mus1 SINE Alu -11 137 2 9 738 3366 189 11 42 chr17 20080439 20080468 -75192183 - L1_Mur2 LINE L1 -1212 4665 4641 9 738 2839 66 42 8 chr17 20080487 20080870 -75191781 - MTA_Mm LTR MaLR 0 396 1 9 738 201 129 0 0 chr17 20080872 20080903 -75191748 + (TTG)n Simple_repeat Simple_repeat 2 32 0 9 738 3049 231 125 3 chr17 20080916 20081700 -75190951 + Lx4A LINE L1 6129 7008 -50 9 738 279 140 0 0 chr17 20081821 20081871 -75190780 + (TATG)n Simple_repeat Simple_repeat 2 51 0 9 738 208 245 10 48 chr17 20081919 20082022 -75190629 + (TCTCTG)n Simple_repeat Simple_repeat 4 102 0 1 738 912 44 0 0 chr17 20082356 20082469 -75190182 + (TCTCC)n Simple_repeat Simple_repeat 1 113 0 1 738 219 146 0 0 chr17 20082471 20082512 -75190139 + (TTTCC)n Simple_repeat Simple_repeat 5 45 0 1 738 271 220 11 11 chr17 20082533 20082625 -75190026 + CT-rich Low_complexity Low_complexity 3 94 0 1 738 1100 77 0 0 chr17 20082634 20082777 -75189874 - B1_Mus1 SINE Alu -1 147 5 1 738 281 269 132 19 chr17 20082800 20082906 -75189745 - RMER15 LTR ERVL -119 456 339 1 738 1786 294 81 12 chr17 20083531 20084195 -75188456 - RMER1B Other Other -2 1064 355 1 738 486 421 34 31 chr17 20084215 20084602 -75188049 - RMER1A Other Other -641 389 2 1 738 329 298 48 9 chr17 20085617 20085855 -75186796 + Lx8 LINE L1 5130 5379 -764 1 738 241 322 23 54 chr17 20086089 20086257 -75186394 + Lx8 LINE L1 5599 5799 -504 1 738 180 0 0 0 chr17 20086492 20086512 -75186139 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1 738 3764 235 33 10 chr17 20086616 20087548 -75185103 + Lx4B LINE L1 5695 6637 -421 1 738 346 259 18 9 chr17 20087549 20087658 -75184993 + L1_Mur2 LINE L1 1005 1114 -5972 1 738 2513 263 34 85 chr17 20087656 20088460 -75184191 + L1_Mur2 LINE L1 1268 2047 -3830 1 738 453 19 0 0 chr17 20088460 20088514 -75184137 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 738 2513 263 34 85 chr17 20088514 20088952 -75183699 + L1_Mur2 LINE L1 2048 2446 -3431 1 738 4450 195 37 8 chr17 20088948 20089952 -75182699 - L1_Mur2 LINE L1 -492 5385 4353 1 738 2006 230 16 4 chr17 20089942 20090392 -75182259 + Lx2 LINE L1 5895 6349 -651 1 738 1790 184 21 0 chr17 20090393 20090724 -75181927 - Lx2 LINE L1 -2 6995 6658 1 738 591 211 0 50 chr17 20090724 20090864 -75181787 + MusHAL1 LINE L1 1436 1568 -1144 1 738 2498 243 26 10 chr17 20090861 20091472 -75181179 + Lx2 LINE L1 6333 6953 -44 1 738 325 164 64 23 chr17 20091472 20091570 -75181081 + ORR1A2 LTR MaLR 261 367 0 1 738 8184 197 69 7 chr17 20091570 20093419 -75179232 + ORR1A2-int LTR MaLR 1 1963 0 1 738 1527 179 82 0 chr17 20093419 20093710 -75178941 + ORR1A2 LTR MaLR 1 315 -12 1 738 5016 236 50 48 chr17 20093722 20095536 -75177115 + L1_Mur2 LINE L1 3379 5194 -683 1 738 22 56 0 0 chr17 20095542 20095578 -75177073 + AT_rich Low_complexity Low_complexity 1 36 0 1 738 3102 226 18 19 chr17 20095595 20096281 -75176370 - Lx4A LINE L1 -37 7021 6337 1 738 5374 180 77 9 chr17 20096289 20097561 -75175090 + L1_Mur2 LINE L1 1467 2824 -3053 1 738 395 243 0 0 chr17 20097557 20097668 -75174983 + L1_Mur2 LINE L1 5180 5290 -590 1 738 8338 161 23 11 chr17 20097903 20099609 -75173042 - Lx2A LINE L1 -4 7004 5268 1 738 420 37 0 0 chr17 20099877 20099931 -75172720 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 738 27 49 0 0 chr17 20099931 20099972 -75172679 + AT_rich Low_complexity Low_complexity 1 41 0 1 738 32741 59 3 8 chr17 20099981 20104938 -75167713 - L1Md_A LINE L1 -509 5374 445 1 738 2917 211 39 48 chr17 20104944 20105844 -75166807 + RMER3D-int LTR ERVK 1950 2841 -1 1 738 2755 97 22 5 chr17 20105845 20106259 -75166392 + BGLII LTR ERVK 1 421 0 1 738 204 40 0 0 chr17 20106355 20106380 -75166271 + (TTA)n Simple_repeat Simple_repeat 2 26 0 1 738 3851 254 24 3 chr17 20106381 20107266 -75165385 - Lx4A LINE L1 -8 7050 6148 1 738 381 236 18 35 chr17 20107319 20107433 -75165218 + L1_Mur2 LINE L1 4645 4756 -1121 1 738 2059 186 7 9 chr17 20107439 20107862 -75164789 + L1_Mur2 LINE L1 4982 5403 -474 1 738 837 278 78 17 chr17 20108100 20108521 -75164130 - Lx9 LINE L1 -286 7358 6912 1 738 23 0 0 0 chr17 20108646 20108669 -75163982 + AT_rich Low_complexity Low_complexity 1 23 0 1 738 4872 128 80 19 chr17 20108728 20109765 -75162886 - Lx3_Mus LINE L1 0 7009 5910 1 738 346 112 72 9 chr17 20109806 20109890 -75162761 - Lx3_Mus LINE L1 -1078 5931 5845 1 738 749 321 32 92 chr17 20109885 20110469 -75162182 + L1_Mur1 LINE L1 1 549 -6433 1 738 240 345 9 18 chr17 20111501 20111613 -75161038 - Lx9 LINE L1 -734 6910 6800 1 738 10323 168 36 32 chr17 20112247 20112636 -75160015 + L1_Mm LINE L1 2475 2866 -3017 1 738 1192 79 6 11 chr17 20112636 20112815 -75159836 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 1 738 10323 168 36 32 chr17 20112815 20113154 -75159497 + L1_Mm LINE L1 2867 3160 -2723 1 738 279 0 0 0 chr17 20113154 20113185 -75159466 + (CAAA)n Simple_repeat Simple_repeat 3 33 0 1 738 10323 168 36 32 chr17 20113185 20113479 -75159172 + L1_Mm LINE L1 3161 3476 -2407 1 738 230 0 0 32 chr17 20113479 20113510 -75159141 + (CAA)n Simple_repeat Simple_repeat 1 30 0 1 738 10323 168 36 32 chr17 20113510 20114661 -75157990 + L1_Mm LINE L1 3477 4658 -1225 1 738 3779 141 53 32 chr17 20114672 20115548 -75157103 - RLTR13D1 LTR ERVK 0 902 1 1 738 4677 104 1 1 chr17 20115548 20116221 -75156430 + L1_Mm LINE L1 4687 5359 -524 1 738 2566 179 60 27 chr17 20116221 20116931 -75155720 + RLTR13D4 LTR ERVK 1 1019 -14 1 738 6650 111 12 3 chr17 20116936 20118127 -75154524 + L1_Mus2 LINE L1 5359 6559 -7 1 738 693 149 27 8 chr17 20118158 20118316 -75154335 - L1_Mur1 LINE L1 -1919 3967 3791 1 738 1266 346 103 13 chr17 20118385 20118986 -75153665 + RMER1A Other Other 215 848 -182 1 738 271 0 51 0 chr17 20118986 20119025 -75153626 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1 738 1266 346 103 13 chr17 20119025 20119170 -75153481 + RMER1A Other Other 849 1027 -3 1 738 286 259 98 57 chr17 20119759 20119882 -75152769 + RMER15 LTR ERVL 337 464 -111 1 738 1174 95 6 6 chr17 20119889 20120069 -75152582 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 738 413 164 26 8 chr17 20120071 20120188 -75152463 + GA-rich Low_complexity Low_complexity 2 120 0 1 738 1046 128 6 0 chr17 20120192 20120364 -75152287 + (GGAAA)n Simple_repeat Simple_repeat 3 175 0 1 738 3426 180 98 16 chr17 20121198 20121595 -75151056 + RMER17D2 LTR ERVK 5 434 -375 1 738 1293 43 0 0 chr17 20121595 20121759 -75150892 + (TC)n Simple_repeat Simple_repeat 1 164 0 1 738 3426 180 98 16 chr17 20121759 20122105 -75150546 + RMER17D2 LTR ERVK 435 809 0 1 738 24 0 0 0 chr17 20122229 20122253 -75150398 + AT_rich Low_complexity Low_complexity 1 24 0 1 738 333 281 30 30 chr17 20122454 20122586 -75150065 - Lx9 LINE L1 -735 6909 6778 1 738 21 36 0 0 chr17 20122877 20122905 -75149746 + AT_rich Low_complexity Low_complexity 1 28 0 1 738 183 100 0 0 chr17 20125469 20125499 -75147152 + (T)n Simple_repeat Simple_repeat 1 30 0 1 738 412 35 17 0 chr17 20125501 20125559 -75147092 - B1_Mm SINE Alu 0 147 89 1 738 3552 146 129 6 chr17 20125741 20126401 -75146250 + Lx3_Mus LINE L1 6261 7001 -8 1 738 1492 227 15 15 chr17 20126527 20126853 -75145798 + ORR1A3 LTR MaLR 1 326 0 1 738 6456 221 46 80 chr17 20126854 20128885 -75143766 + ORR1A3-int LTR MaLR 2 1963 0 1 738 1466 241 9 0 chr17 20128892 20129207 -75143444 + ORR1A3 LTR MaLR 8 325 -2 1 738 1072 230 23 0 chr17 20129614 20129875 -75142776 - L1_Mur2 LINE L1 -1272 4605 4339 1 738 3783 181 28 25 chr17 20129875 20130591 -75142060 + Lx LINE L1 5935 6652 -2 1 738 5288 230 160 5 chr17 20130611 20132375 -75140276 + Lx3C LINE L1 3875 5975 -1001 1 738 320 370 6 13 chr17 20132439 20132598 -75140053 - ORR1C2 LTR MaLR -54 330 173 1 738 259 287 206 32 chr17 20132909 20133186 -75139465 + Lx8 LINE L1 7140 7464 -9 1 738 4785 123 42 0 chr17 20133277 20134680 -75137971 + L1Md_F LINE L1 371 1834 -4049 1 738 2114 127 16 24 chr17 20134738 20135116 -75137535 - RLTR22_Mur LTR ERVK -993 855 481 1 738 1146 127 80 5 chr17 20135116 20135329 -75137322 + L1_Mus3 LINE L1 6406 6634 -4 1 738 1361 200 3 45 chr17 20135330 20135618 -75137033 - RLTR22_Mur LTR ERVK -1570 278 3 1 738 294 357 110 31 chr17 20135773 20135964 -75136687 + B3 SINE B2 7 212 -4 1 738 43 35 0 0 chr17 20136334 20136391 -75136260 + AT_rich Low_complexity Low_complexity 1 57 0 1 738 26 50 0 0 chr17 20136531 20136571 -75136080 + AT_rich Low_complexity Low_complexity 1 40 0 1 738 226 276 51 8 chr17 20136576 20136693 -75135958 - Lx9 LINE L1 -1 7643 7522 1 738 342 0 0 0 chr17 20136718 20136756 -75135895 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 738 2708 106 34 5 chr17 20137229 20137645 -75135006 + L1_Mus3 LINE L1 6205 6632 -6 1 738 7577 52 15 3 chr17 20138822 20139769 -75132882 + RLTR13A2 LTR ERVK 1 958 0 1 738 338 271 7 28 chr17 20141690 20141834 -75130817 - MYSERV-int LTR ERVK -8 6542 6402 1 738 716 306 82 60 chr17 20142008 20142685 -75129966 - MYSERV6-int LTR ERVK -274 8685 8092 1 738 317 252 102 9 chr17 20143354 20143462 -75129189 - RMER4A LTR ERVK -27 439 322 1 738 2434 80 9 0 chr17 20143463 20143801 -75128850 + MTA_Mm LTR MaLR 56 396 0 1 738 362 307 59 73 chr17 20144229 20144433 -75128218 + Lx7 LINE L1 5599 5799 -1674 1 738 342 0 0 0 chr17 20144646 20144684 -75127967 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 1 738 2140 211 22 26 chr17 20144805 20145080 -75127571 + Lx4B LINE L1 5692 5968 -1090 1 738 3254 99 17 2 chr17 20145080 20145547 -75127104 + MT2C_Mm LTR ERVL 2 475 0 1 738 2140 211 22 26 chr17 20145547 20145807 -75126844 + Lx4B LINE L1 5969 6225 -833 1 738 494 187 61 7 chr17 20145824 20145957 -75126694 + RLTR13B1 LTR ERVK 781 958 0 1 738 1207 220 103 0 chr17 20145958 20146249 -75126402 + Lx4B LINE L1 6318 6638 -420 1 738 1314 269 145 19 chr17 20146248 20146991 -75125660 + L1_Mur2 LINE L1 1004 1840 -4037 1 738 442 152 11 0 chr17 20146994 20147086 -75125565 + L1_Mur2 LINE L1 1948 2040 -3837 1 738 3432 217 27 2 chr17 20147089 20147910 -75124741 - L1_Mur1 LINE L1 -684 5202 4362 1 738 1097 223 11 4 chr17 20147900 20148166 -75124485 + Lx2B LINE L1 5895 6162 -838 1 738 4446 112 4 2 chr17 20148167 20148932 -75123719 + L1VL1 LINE L1 930 1696 -2002 1 738 2160 126 142 35 chr17 20148934 20149369 -75123282 - RLTR45 LTR ERVK 0 482 1 1 738 7503 152 11 8 chr17 20149369 20150767 -75121884 - RLTR45-int LTR ERVK -456 7761 6332 1 738 2565 57 6 0 chr17 20150856 20151174 -75121477 - RLTR45-int LTR ERVK -5596 1648 1329 1 738 467 266 28 28 chr17 20151556 20151699 -75120952 - RNERVK23-int LTR ERVK -1880 6337 6195 1 738 1092 32 0 0 chr17 20151908 20152034 -75120617 - RLTR45-int LTR ERVK -6426 818 693 1 738 1007 49 0 94 chr17 20152391 20152550 -75120101 - RLTR45-int LTR ERVK -6552 692 549 1 738 2728 150 43 4 chr17 20153086 20153548 -75119103 - RLTR45-int LTR ERVK -6764 480 1 1 738 2205 131 145 19 chr17 20153548 20153976 -75118675 - RLTR45 LTR ERVK 0 482 1 1 738 23262 119 5 15 chr17 20153976 20154296 -75118355 + L1Md_F2 LINE L1 1909 2225 -3658 1 738 243 0 0 0 chr17 20154296 20154323 -75118328 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 738 23262 119 5 15 chr17 20154323 20157713 -75114938 + L1Md_F2 LINE L1 2226 5585 -298 1 738 6232 103 48 6 chr17 20157714 20158659 -75113992 + L1Md_F2 LINE L1 5587 6570 -12 1 738 35970 35 0 7 chr17 20159268 20164445 -75108206 + L1Md_T LINE L1 445 5586 -297 1 738 8390 31 3 1 chr17 20164445 20165439 -75107212 + L1Md_T LINE L1 5587 6582 0 1 738 958 192 17 0 chr17 20168210 20168387 -75104264 + Lx3_Mus LINE L1 6261 6440 -569 1 738 293 204 0 0 chr17 20168387 20168441 -75104210 - ORR1A4 LTR MaLR -268 61 8 1 738 27 29 0 0 chr17 20168491 20168525 -75104126 + AT_rich Low_complexity Low_complexity 1 34 0 1 738 2971 158 38 6 chr17 20168564 20169098 -75103553 - Lx3_Mus LINE L1 0 7009 6459 1 738 1023 267 12 0 chr17 20169099 20169350 -75103301 + ORR1A2 LTR MaLR 66 319 -8 1 738 6397 225 44 78 chr17 20169355 20171387 -75101264 + ORR1A2-int LTR MaLR 2 1963 0 1 738 1559 220 19 3 chr17 20171394 20171709 -75100942 + ORR1A2 LTR MaLR 8 327 0 1 738 1130 236 15 0 chr17 20172143 20172410 -75100241 - L1_Mur2 LINE L1 -1272 4605 4335 1 738 2715 173 40 0 chr17 20172407 20172881 -75099770 + Lx LINE L1 5935 6427 -227 1 738 2991 206 139 1 chr17 20172881 20173967 -75098684 + Lx2 LINE L1 4547 5972 -1001 1 738 523 347 32 29 chr17 20174050 20174296 -75098355 - ORR1C2 LTR MaLR -55 329 83 1 738 4209 183 35 6 chr17 20175452 20176275 -75096376 + Lx2 LINE L1 6150 6996 -1 1 738 298 408 57 20 chr17 20176528 20176801 -75095850 + MTE2b LTR MaLR 16 299 -80 1 738 513 394 19 44 chr17 20176878 20177244 -75095407 + ORR1D2 LTR MaLR 1 357 -13 2 738 187 204 0 22 chr17 20177935 20177980 -75094671 + L3 LINE CR1 2795 2838 -1651 2 738 21 57 0 0 chr17 20178221 20178256 -75094395 + AT_rich Low_complexity Low_complexity 1 35 0 2 738 276 265 61 127 chr17 20180723 20180734 -75091917 - MT2B2 LTR ERVL -315 269 255 2 738 276 295 12 25 chr17 20180734 20180814 -75091837 - B1_Mus2 SINE Alu -45 102 24 2 738 276 265 61 127 chr17 20180814 20180952 -75091699 - MT2B2 LTR ERVL -315 254 56 2 738 211 356 134 24 chr17 20180851 20181015 -75091636 - B4 SINE B4 -105 187 6 2 738 23 86 0 0 chr17 20181425 20181483 -75091168 + AT_rich Low_complexity Low_complexity 1 58 0 2 738 243 239 69 26 chr17 20181675 20181791 -75090860 - Lx9 LINE L1 -2 7642 7522 2 738 238 30 30 0 chr17 20182308 20182341 -75090310 + L1_Mus3 LINE L1 6204 6237 -401 2 738 752 183 12 0 chr17 20182341 20182505 -75090146 + L1_Mus3 LINE L1 6473 6638 0 2 738 1106 112 17 11 chr17 20184517 20184698 -75087953 + L1Md_F2 LINE L1 6401 6582 0 2 739 348 240 84 33 chr17 20185747 20185902 -75086749 - MYSERV-int LTR ERVK -46 6504 6369 2 739 875 268 18 4 chr17 20186442 20186667 -75085984 + RLTR1D LTR ERV1 21 248 -357 2 739 1585 217 65 50 chr17 20186665 20187084 -75085567 + RLTR1D LTR ERV1 183 589 -16 2 739 30172 244 35 28 chr17 20187113 20194562 -75078089 + MMERGLN-int LTR ERV1 29 7526 -30 2 739 452 150 38 0 chr17 20194559 20194639 -75078012 + RLTR6-int LTR ERV1 6043 6125 -1653 2 739 1808 226 46 67 chr17 20194652 20195282 -75077369 + RLTR1D LTR ERV1 37 611 -13 2 739 511 297 42 25 chr17 20195637 20196050 -75076601 - MYSERV6-int LTR ERVK -572 8387 8120 2 739 246 261 46 0 chr17 20196246 20196311 -75076340 - RMER4B LTR ERVK -70 515 448 2 739 267 281 57 7 chr17 20197293 20197433 -75075218 + L1M3 LINE L1 5125 5271 -869 2 739 744 90 0 0 chr17 20197467 20197578 -75075073 - L1_Mus1 LINE L1 -1 6566 6456 2 739 16976 94 7 2 chr17 20197578 20200646 -75072005 + L1_Mus1 LINE L1 3491 6567 0 2 739 4798 194 13 4 chr17 20200647 20201569 -75071082 + ORR1A2-int LTR MaLR 1011 1940 -23 2 739 478 202 0 0 chr17 20201578 20201672 -75070979 + ORR1A2 LTR MaLR 1 94 -233 2 739 543 111 0 122 chr17 20201672 20201795 -75070856 - Lx LINE L1 -7 6647 6540 2 739 4903 180 11 3 chr17 20201795 20203096 -75069555 - Lx LINE L1 -241 6413 5101 2 739 1118 175 67 27 chr17 20203099 20203322 -75069329 + ORR1A2 LTR MaLR 96 327 0 2 739 5555 247 46 11 chr17 20203322 20205069 -75067582 + L1_Mur2 LINE L1 3379 5187 -690 2 739 222 37 0 0 chr17 20205101 20205128 -75067523 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 739 974 256 34 11 chr17 20205129 20205398 -75067253 - Lx4A LINE L1 -7 7051 6777 2 739 531 258 15 0 chr17 20205396 20205528 -75067123 + Lx4A LINE L1 6393 6526 -532 2 739 252 267 26 13 chr17 20205679 20205755 -75066896 + RLTR19-int LTR ERVK 3576 3652 -2485 2 739 1191 54 60 6 chr17 20205766 20205934 -75066717 - L1Md_F3 LINE L1 -14 6570 6394 2 739 29 0 0 0 chr17 20206313 20206342 -75066309 + AT_rich Low_complexity Low_complexity 1 29 0 2 739 498 33 0 0 chr17 20207103 20207163 -75065488 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 739 321 317 0 0 chr17 20207179 20207283 -75065368 + (TG)n Simple_repeat Simple_repeat 1 104 0 2 739 31 88 0 0 chr17 20207602 20207682 -75064969 + AT_rich Low_complexity Low_complexity 1 80 0 2 739 224 310 56 33 chr17 20208128 20208218 -75064433 - B3 SINE B2 -118 98 7 2 739 3416 171 27 10 chr17 20208370 20208994 -75063657 + RLTR22_Mur LTR ERVK 1 635 -1213 2 739 279 71 0 0 chr17 20209016 20209058 -75063593 + (TTGG)n Simple_repeat Simple_repeat 2 43 0 2 739 416 259 84 0 chr17 20209069 20209200 -75063451 + RCHARR1 DNA MER1_type 831 972 -2 2 739 28151 118 4 3 chr17 20209274 20211194 -75061457 - L1_Mus1 LINE L1 0 6567 4647 2 739 1131 239 45 26 chr17 20211194 20211546 -75061105 + RLTR10D LTR ERVK 1 359 0 2 739 28151 136 2 4 chr17 20211546 20214890 -75057761 - L1_Mus1 LINE L1 -1237 4646 1308 2 739 761 294 37 21 chr17 20214890 20215258 -75057393 - ORR1B1-int LTR MaLR -1123 386 1 2 739 673 273 127 12 chr17 20215280 20215525 -75057126 - ORR1B1 LTR MaLR -23 371 99 2 739 403 271 42 82 chr17 20215525 20215831 -75056820 + L1VL1 LINE L1 178 491 -5927 2 739 263 170 37 19 chr17 20215848 20215902 -75056749 + L1Md_F LINE L1 578 632 -5887 2 739 230 304 122 29 chr17 20215908 20216047 -75056604 + RLTR25A LTR ERVK 406 557 -546 2 739 292 318 0 22 chr17 20215976 20216067 -75056584 + B1_Mus2 SINE Alu 13 103 -46 2 739 195 217 0 0 chr17 20216127 20216187 -75056464 + (TAAA)n Simple_repeat Simple_repeat 1 60 0 2 739 984 113 0 0 chr17 20216554 20216687 -75055964 + B1_Mm SINE Alu 1 133 -14 2 739 318 389 36 53 chr17 20219617 20219973 -75052678 - ORR1A3 LTR MaLR -12 358 9 2 739 4085 189 42 2 chr17 20220596 20221415 -75051236 - Lx2 LINE L1 -1 6996 6146 2 739 21 0 0 0 chr17 20221435 20221456 -75051195 + AT_rich Low_complexity Low_complexity 1 21 0 2 739 225 135 0 0 chr17 20221589 20221626 -75051025 - L1_Mur2 LINE L1 -988 4889 4853 2 739 2061 178 75 11 chr17 20221651 20221704 -75050947 - L1_Mur2 LINE L1 -1014 4863 4812 2 739 531 0 0 0 chr17 20221704 20221763 -75050888 + (TA)n Simple_repeat Simple_repeat 2 60 0 2 739 2061 178 75 11 chr17 20221763 20222164 -75050487 - L1_Mur2 LINE L1 -1066 4811 4381 2 739 3076 111 4 7 chr17 20222152 20222604 -75050047 - L1_Mus2 LINE L1 -108 5775 5325 2 739 5765 91 1 1 chr17 20222600 20223393 -75049258 + L1_Mus2 LINE L1 5774 6566 0 2 739 2500 206 13 11 chr17 20223393 20224001 -75048650 - L1_Mur2 LINE L1 -1488 4389 3781 2 739 1600 231 27 5 chr17 20224004 20224408 -75048243 + L1_Mur2 LINE L1 4210 4622 -1255 2 739 432 0 0 0 chr17 20224499 20224547 -75048104 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 739 2417 226 33 65 chr17 20224727 20225007 -75047644 - ORR1A3-int LTR MaLR -516 1447 1184 2 739 5649 115 9 14 chr17 20225007 20225582 -75047069 + L1_Mus3 LINE L1 5757 6326 -312 2 739 4955 133 5 22 chr17 20225582 20226402 -75046249 - RLTR13D1 LTR ERVK 0 806 1 2 739 5649 115 9 14 chr17 20226402 20226705 -75045946 + L1_Mus3 LINE L1 6327 6631 -7 2 739 2417 226 33 65 chr17 20226705 20227178 -75045473 - ORR1A3-int LTR MaLR -780 1183 718 2 739 1086 217 54 62 chr17 20227132 20227392 -75045259 - MT2B LTR ERVL -309 292 35 2 739 2901 202 74 61 chr17 20227240 20227993 -75044658 - ORR1A3-int LTR MaLR -1199 764 2 2 739 1415 207 20 67 chr17 20227994 20228336 -75044315 - ORR1A3 LTR MaLR 0 326 1 2 739 21 0 0 0 chr17 20228341 20228362 -75044289 + AT_rich Low_complexity Low_complexity 1 21 0 2 739 31136 172 26 18 chr17 20228736 20230889 -75041762 + IAPEY3-int LTR ERVK 1911 4118 -3562 2 739 187 200 62 124 chr17 20230889 20230986 -75041665 + L3 LINE CR1 3939 4029 -460 2 739 31136 172 26 18 chr17 20230986 20234458 -75038193 + IAPEY3-int LTR ERVK 4119 7680 0 2 739 314 292 50 66 chr17 20234586 20234784 -75037867 + RLTR46 LTR ERVK 126 320 0 2 739 287 78 0 19 chr17 20235927 20235979 -75036672 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 2 739 1054 96 7 0 chr17 20235983 20236129 -75036522 - B1_Mm SINE Alu 0 147 1 2 739 1761 98 0 0 chr17 20236164 20236408 -75036243 - L1_Mus3 LINE L1 -717 5921 5678 2 739 596 73 73 0 chr17 20236408 20236518 -75036133 + L1_Mus3 LINE L1 6515 6632 -6 2 739 1581 27 21 0 chr17 20236629 20236817 -75035834 + B2_Mm1t SINE B2 2 193 0 2 739 569 301 66 0 chr17 20237055 20237238 -75035413 - Lx3C LINE L1 -41 6935 6741 2 739 447 244 37 8 chr17 20237228 20237377 -75035274 - Lx4B LINE L1 -526 6532 6378 2 739 1703 230 91 26 chr17 20237654 20238118 -75034533 - Lx4A LINE L1 -513 6545 6052 2 739 2347 191 82 8 chr17 20238119 20238619 -75034032 + Lx4A LINE L1 6520 7056 -2 2 739 219 69 0 0 chr17 20238647 20238676 -75033975 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 739 14246 190 22 19 chr17 20238950 20242479 -75030172 + MusHAL1 LINE L1 1140 4932 -954 2 739 2324 117 39 44 chr17 20242477 20242888 -75029763 - Lx3_Mus LINE L1 -805 6204 5796 2 739 4658 148 12 1 chr17 20242888 20243647 -75029004 + Lx3_Mus LINE L1 6218 6985 -24 2 739 973 0 17 0 chr17 20243647 20243764 -75028887 + (TAGA)n Simple_repeat Simple_repeat 3 121 0 2 739 1869 209 23 14 chr17 20243791 20244227 -75028424 + MusHAL1 LINE L1 4922 5361 -516 2 739 5032 147 7 5 chr17 20244217 20244977 -75027674 - L1_Mur2 LINE L1 -1269 4608 3846 2 739 213 39 0 0 chr17 20244977 20245003 -75027648 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2 739 5032 147 7 5 chr17 20245003 20245102 -75027549 - L1_Mur2 LINE L1 -2032 3845 3747 2 739 2763 201 29 11 chr17 20245099 20245718 -75026933 + L1_Mur2 LINE L1 4594 5223 -654 2 739 3081 150 23 21 chr17 20245719 20246251 -75026400 + Lx2 LINE L1 6465 6997 0 2 739 607 288 115 29 chr17 20246662 20246905 -75025746 - Lx2B LINE L1 0 7000 6737 2 739 455 270 46 26 chr17 20246894 20247046 -75025605 - Lx4B LINE L1 -525 6533 6379 2 739 450 0 0 0 chr17 20247177 20247227 -75025424 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 739 579 319 112 51 chr17 20247355 20247712 -75024939 - ORR1C2 LTR MaLR -15 379 18 2 739 1082 189 4 32 chr17 20247712 20247963 -75024688 - RMER17A2 LTR ERVK -2 904 661 2 739 1102 140 12 0 chr17 20247961 20248132 -75024519 - RMER17A2 LTR ERVK -215 691 519 2 739 1269 152 18 36 chr17 20248134 20248359 -75024292 - RMER17A2 LTR ERVK -685 221 1 2 739 495 339 78 36 chr17 20248386 20248692 -75023959 - MTD LTR MaLR -88 331 13 2 739 327 388 57 31 chr17 20248815 20249233 -75023418 - Lx8 LINE L1 -713 6760 6332 2 739 23 0 0 0 chr17 20249343 20249366 -75023285 + AT_rich Low_complexity Low_complexity 1 23 0 2 739 576 338 83 43 chr17 20249625 20249903 -75022748 - MTE2a LTR MaLR 0 379 91 2 739 237 254 0 0 chr17 20252186 20252241 -75020410 - B4 SINE B4 -234 58 4 2 739 23 0 0 0 chr17 20252285 20252308 -75020343 + AT_rich Low_complexity Low_complexity 1 23 0 2 739 1216 48 0 0 chr17 20252421 20252567 -75020084 + B1_Mus2 SINE Alu 2 147 0 2 739 784 271 174 37 chr17 20252853 20253175 -75019476 + RMER13A LTR ERVK 96 461 -399 2 739 430 352 25 6 chr17 20254864 20255027 -75017624 + B3 SINE B2 3 168 -48 2 739 1717 209 26 11 chr17 20255035 20255384 -75017267 - ORR1B1 LTR MaLR 0 394 41 2 739 253 194 30 0 chr17 20255413 20255480 -75017171 + (TA)n Simple_repeat Simple_repeat 2 70 0 2 739 26 0 0 0 chr17 20255677 20255703 -75016948 + AT_rich Low_complexity Low_complexity 1 26 0 2 739 244 389 84 38 chr17 20256981 20257112 -75015539 + B1F2 SINE Alu 5 141 -8 2 739 24 0 0 0 chr17 20257121 20257145 -75015506 + AT_rich Low_complexity Low_complexity 1 24 0 2 739 21 0 0 0 chr17 20257797 20257818 -75014833 + AT_rich Low_complexity Low_complexity 1 21 0 2 739 183 100 0 0 chr17 20257829 20257859 -75014792 + (TCTCTG)n Simple_repeat Simple_repeat 5 34 0 2 739 384 290 13 74 chr17 20260002 20260151 -75012500 + B1_Mur1 SINE Alu 7 146 -3 2 739 534 254 28 0 chr17 20260623 20260765 -75011886 + B1_Mur2 SINE Alu 3 148 -1 2 739 243 250 46 15 chr17 20260836 20260901 -75011750 + B3A SINE B2 15 81 -117 2 739 519 17 0 0 chr17 20261323 20261383 -75011268 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 739 682 317 51 28 chr17 20261455 20261708 -75010943 + MTD LTR MaLR 1 259 -160 3 739 27 0 0 0 chr17 20262361 20262388 -75010263 + AT_rich Low_complexity Low_complexity 1 27 0 3 739 346 220 21 64 chr17 20262466 20262607 -75010044 + Lx9 LINE L1 7383 7517 -127 3 739 2130 36 0 0 chr17 20262748 20262998 -75009653 + L1_Mus1 LINE L1 6318 6567 0 3 739 252 267 0 34 chr17 20263385 20263474 -75009177 + CT-rich Low_complexity Low_complexity 1 86 0 3 739 506 367 23 55 chr17 20264522 20264741 -75007910 + ID_B1 SINE B4 5 216 -8 3 739 467 33 16 0 chr17 20264890 20264951 -75007700 + (TG)n Simple_repeat Simple_repeat 2 63 0 3 739 328 324 27 9 chr17 20265000 20265112 -75007539 - B3A SINE B2 -82 116 3 3 739 500 291 31 0 chr17 20265161 20265288 -75007363 + B3A SINE B2 11 141 -57 3 739 505 330 22 31 chr17 20265299 20265653 -75006998 - BGLII_B LTR ERVK -21 420 2 3 739 290 26 26 0 chr17 20265670 20265709 -75006942 + (TAGA)n Simple_repeat Simple_repeat 1 40 0 3 739 726 72 0 0 chr17 20265709 20265806 -75006845 + (TATAA)n Simple_repeat Simple_repeat 4 100 0 3 739 231 133 0 0 chr17 20265922 20265967 -75006684 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 739 343 337 8 17 chr17 20267850 20267983 -75004668 + B4 SINE B4 11 138 -86 3 739 569 14 14 0 chr17 20268142 20268212 -75004439 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 739 252 233 40 40 chr17 20268668 20268744 -75003907 - PB1D10 SINE Alu 0 117 42 3 739 22 0 0 0 chr17 20269101 20269123 -75003528 + AT_rich Low_complexity Low_complexity 1 22 0 3 739 492 255 251 16 chr17 20269171 20269422 -75003229 + RMER21A LTR ERV1 377 686 -261 3 739 1008 302 107 20 chr17 20269429 20269796 -75002855 + RodERV21-int LTR ERV1 58 445 -4546 3 739 225 0 0 0 chr17 20269796 20269821 -75002830 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3 739 1008 302 107 20 chr17 20269821 20269912 -75002739 + RodERV21-int LTR ERV1 446 556 -4435 3 739 1634 245 43 14 chr17 20269943 20270366 -75002285 + RodERV21-int LTR ERV1 3753 4187 -804 3 739 302 18 73 0 chr17 20270369 20270424 -75002227 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 3 739 1430 278 15 34 chr17 20270471 20270881 -75001770 + RodERV21-int LTR ERV1 4200 4601 -390 3 739 326 308 75 21 chr17 20270898 20271084 -75001567 - L1_Mur3 LINE L1 -351 5526 5331 3 739 949 318 66 41 chr17 20271115 20271301 -75001350 - L1_Mur3 LINE L1 -1487 4393 4199 3 739 4807 116 19 1 chr17 20271301 20272028 -75000623 + Lx3_Mus LINE L1 6262 7001 -8 3 739 949 318 66 41 chr17 20272028 20272745 -74999906 - L1_Mur3 LINE L1 -1682 4198 3468 3 739 2876 293 54 52 chr17 20272757 20273348 -74999303 - L1_Mur3 LINE L1 -2697 3183 2591 3 739 998 117 75 12 chr17 20273348 20273521 -74999130 - B2_Mm1t SINE B2 -8 185 2 3 739 2876 293 54 52 chr17 20273521 20274774 -74997877 - L1_Mur3 LINE L1 -3290 2590 1335 3 739 398 20 20 0 chr17 20274821 20274872 -74997779 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 3 739 6835 105 12 1 chr17 20274893 20276104 -74996547 - L1_Mus1 LINE L1 -1 6566 5345 3 739 4221 81 3 0 chr17 20276103 20276671 -74995980 + L1_Mm LINE L1 4549 5118 -765 3 739 2345 151 10 15 chr17 20276671 20277082 -74995569 - RLTR9E LTR ERVK 0 409 1 3 739 1041 273 4 8 chr17 20277453 20277719 -74994932 - Lx4A LINE L1 -10 7048 6784 3 739 1672 116 0 4 chr17 20277719 20277970 -74994681 - MTB LTR MaLR 0 400 151 3 739 540 0 0 0 chr17 20279570 20279630 -74993021 + (TA)n Simple_repeat Simple_repeat 2 61 0 3 739 357 303 30 8 chr17 20280540 20280673 -74991978 + RMER16-int LTR ERVK 169 304 -6940 3 739 1425 196 107 32 chr17 20280872 20281210 -74991441 + RMER16-int LTR ERVK 241 603 -4803 3 739 35008 48 1 3 chr17 20281216 20286549 -74986102 + L1Md_T LINE L1 171 5588 -298 3 739 8255 44 0 0 chr17 20286550 20287546 -74985105 + L1Md_T LINE L1 5590 6585 0 3 739 22 0 0 0 chr17 20287716 20287738 -74984913 + AT_rich Low_complexity Low_complexity 1 22 0 3 739 603 192 191 85 chr17 20287756 20287955 -74984696 + RMER16-int LTR ERVK 600 819 -4587 3 739 511 173 85 16 chr17 20287957 20288086 -74984565 + RMER16-int LTR ERVK 938 1060 -5077 3 739 599 197 8 0 chr17 20288190 20288307 -74984344 + RMER16-int LTR ERVK 2636 2753 -4653 3 739 5996 171 69 117 chr17 20288342 20289004 -74983647 + RLTR45-int LTR ERVK 4296 4885 -2359 3 739 186 43 0 0 chr17 20289004 20289027 -74983624 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 3 739 5996 171 69 117 chr17 20289027 20290230 -74982421 + RLTR45-int LTR ERVK 4886 6070 -1174 3 739 806 268 4 0 chr17 20290232 20290509 -74982142 + RLTR45-int LTR ERVK 7506 7748 -469 3 739 4084 181 26 7 chr17 20290622 20291314 -74981337 + ETnERV2-int LTR ERVK 6498 7202 -204 3 739 26443 135 5 25 chr17 20291811 20295615 -74977036 - L1_Mus2 LINE L1 -3 6563 2878 3 739 1145 75 0 0 chr17 20295615 20295762 -74976889 - B1_Mm SINE Alu 0 147 1 3 739 26443 152 6 23 chr17 20295762 20297967 -74974684 - L1_Mus2 LINE L1 -3006 2877 667 3 739 1007 143 0 0 chr17 20298102 20298249 -74974402 - B1_Mus1 SINE Alu -1 147 1 3 739 591 280 20 27 chr17 20299137 20299371 -74973280 - Lx3C LINE L1 -9 7049 6724 3 739 411 282 48 31 chr17 20299369 20299498 -74973153 - Lx3C LINE L1 -492 6508 6396 3 739 2022 196 147 7 chr17 20299768 20300210 -74972441 - Lx4A LINE L1 -502 6556 6053 3 739 400 215 11 0 chr17 20300212 20300305 -74972346 + Lx4A LINE L1 6520 6613 -445 3 739 780 321 56 39 chr17 20300304 20300491 -74972160 + Lx9 LINE L1 6929 7114 -530 3 739 1837 145 60 6 chr17 20300491 20300825 -74971826 + L1_Mus4 LINE L1 6277 6628 -8 3 739 306 73 0 0 chr17 20300833 20300874 -74971777 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 739 780 321 56 39 chr17 20300874 20301017 -74971634 + Lx9 LINE L1 7122 7258 -386 3 739 1131 41 0 0 chr17 20301017 20301162 -74971489 + (CA)n Simple_repeat Simple_repeat 2 146 0 3 739 780 321 56 39 chr17 20301162 20301232 -74971419 + Lx9 LINE L1 7259 7344 -300 3 739 1349 144 119 13 chr17 20301513 20301816 -74970835 - L1_Mur2 LINE L1 -478 5399 5065 3 739 1004 219 23 57 chr17 20301821 20302174 -74970477 - L1_Mur2 LINE L1 -933 4944 4604 3 739 2460 253 65 2 chr17 20302174 20302955 -74969696 + Lx4A LINE L1 6132 6962 -88 3 739 24 0 0 0 chr17 20302972 20302996 -74969655 + AT_rich Low_complexity Low_complexity 1 24 0 3 739 224 216 0 0 chr17 20303080 20303131 -74969520 + (TATG)n Simple_repeat Simple_repeat 4 54 0 3 739 195 100 0 0 chr17 20303147 20303177 -74969474 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 739 3366 70 18 5 chr17 20303242 20303690 -74968961 + L1_Mus1 LINE L1 6114 6567 0 3 739 1292 204 0 21 chr17 20303855 20304136 -74968515 - Lx LINE L1 -2 6652 6378 3 739 186 300 52 115 chr17 20304773 20304965 -74967686 - L3 LINE CR1 -747 3742 3563 3 739 310 339 163 22 chr17 20305096 20305280 -74967371 - HAL1-3A_ME LINE L1 -653 2205 1996 3 739 248 271 148 9 chr17 20305313 20305421 -74967230 - RMER15 LTR ERVL -116 459 337 3 739 918 142 28 0 chr17 20305638 20305779 -74966872 + B1_Mus1 SINE Alu 4 148 0 3 739 387 0 0 0 chr17 20305783 20305826 -74966825 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 3 739 367 221 37 22 chr17 20306237 20306371 -74966280 - RMER1B Other Other -9 1057 922 3 739 486 33 0 0 chr17 20306411 20306471 -74966180 + (TTTC)n Simple_repeat Simple_repeat 3 62 0 3 739 12066 188 101 27 chr17 20307418 20309563 -74963088 + Lx2 LINE L1 987 3409 -2477 3 739 992 106 28 7 chr17 20309563 20309705 -74962946 + B1_Mm SINE Alu 2 146 -1 3 739 12066 200 117 32 chr17 20309705 20311155 -74961496 + Lx2 LINE L1 3410 4875 -1011 3 739 1322 62 6 0 chr17 20311155 20311332 -74961319 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 3 739 7073 108 0 5 chr17 20311334 20312797 -74959854 - L1_Mus2 LINE L1 -4 6562 5107 3 739 5701 176 18 73 chr17 20312798 20314730 -74957921 + Lx2 LINE L1 4862 6724 -273 3 739 1097 199 5 0 chr17 20314727 20314938 -74957713 + L1_Mur2 LINE L1 5012 5223 -654 3 739 2867 160 15 22 chr17 20314939 20315475 -74957176 + Lx LINE L1 6117 6648 -6 3 739 28 0 0 0 chr17 20315866 20315894 -74956757 + AT_rich Low_complexity Low_complexity 1 28 0 3 739 534 282 26 52 chr17 20315894 20316121 -74956530 - Lx4B LINE L1 -8 7050 6741 3 92 383 301 15 0 chr17 20316128 20316261 -74956390 - Lx2B LINE L1 -488 6512 6378 3 740 423 0 0 0 chr17 20316391 20316438 -74956213 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 740 802 298 59 57 chr17 20316579 20316934 -74955717 - ORR1C2 LTR MaLR -29 345 1 3 740 546 349 79 26 chr17 20316934 20317237 -74955414 - MTD LTR MaLR -88 331 13 3 740 291 386 75 44 chr17 20317435 20318050 -74954601 - Lx8 LINE L1 -447 7026 6393 3 740 270 0 0 0 chr17 20321308 20321338 -74951313 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 740 742 218 185 17 chr17 20321640 20321878 -74950773 + RMER13A LTR ERVK 184 461 -399 3 740 25 0 0 0 chr17 20322517 20322542 -74950109 + AT_rich Low_complexity Low_complexity 1 25 0 3 740 433 331 16 33 chr17 20322728 20322912 -74949739 + RMER15 LTR ERVL 386 566 -9 3 740 21 57 0 0 chr17 20323026 20323061 -74949590 + AT_rich Low_complexity Low_complexity 1 35 0 3 740 1930 190 20 8 chr17 20323724 20324075 -74948576 - ORR1B1 LTR MaLR 0 394 40 3 740 234 220 55 0 chr17 20324081 20324172 -74948479 + (TA)n Simple_repeat Simple_repeat 2 97 0 3 740 23 0 0 0 chr17 20324375 20324398 -74948253 + AT_rich Low_complexity Low_complexity 1 23 0 3 740 1008 122 0 7 chr17 20325253 20325401 -74947250 + B1_Mus1 SINE Alu 2 148 0 3 740 449 343 47 52 chr17 20326321 20326533 -74946118 + ID_B1 SINE B4 14 224 0 3 740 268 264 80 0 chr17 20326766 20326891 -74945760 - MER33 DNA MER1_type -98 226 92 3 740 504 0 0 0 chr17 20327383 20327439 -74945212 + (TC)n Simple_repeat Simple_repeat 1 56 0 3 740 236 293 20 0 chr17 20327439 20327538 -74945113 + (TCTCTG)n Simple_repeat Simple_repeat 1 101 0 3 740 335 309 20 73 chr17 20329905 20330055 -74942596 + B1_Mur1 SINE Alu 5 146 -3 3 740 267 31 0 0 chr17 20330063 20330095 -74942556 + (CATA)n Simple_repeat Simple_repeat 3 34 0 3 740 555 246 28 0 chr17 20330540 20330682 -74941969 + B1_Mur2 SINE Alu 3 148 -1 3 740 255 281 47 0 chr17 20330753 20330817 -74941834 + B3A SINE B2 15 81 -117 3 740 489 58 0 0 chr17 20331351 20331420 -74941231 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 3 740 279 54 0 0 chr17 20331638 20331675 -74940976 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 740 580 345 79 12 chr17 20331755 20331996 -74940655 + MTD LTR MaLR 3 259 -160 3 740 327 137 0 0 chr17 20332290 20332363 -74940288 + (A)n Simple_repeat Simple_repeat 1 73 0 3 740 924 229 80 44 chr17 20332441 20332691 -74939960 + Lx9 LINE L1 7234 7491 -153 3 740 777 41 0 0 chr17 20332691 20332788 -74939863 + (TG)n Simple_repeat Simple_repeat 2 98 0 3 740 924 229 80 44 chr17 20332788 20332926 -74939725 + Lx9 LINE L1 7492 7635 -9 3 740 330 358 0 0 chr17 20333125 20333220 -74939431 + polypyrimidine Low_complexity Low_complexity 3 97 0 3 740 182 156 22 0 chr17 20333257 20333302 -74939349 + (TGAA)n Simple_repeat Simple_repeat 4 49 0 3 740 226 301 122 81 chr17 20333444 20333567 -74939084 - MLT1C LTR MaLR -16 451 324 3 740 993 158 55 0 chr17 20333803 20334005 -74938646 + L1_Mus3 LINE L1 6426 6638 0 4 740 964 144 0 22 chr17 20334068 20334252 -74938399 + CT-rich Low_complexity Low_complexity 1 180 0 4 740 1024 108 0 57 chr17 20334252 20334409 -74938242 - B1_Mus1 SINE Alu 0 148 1 4 740 431 338 22 53 chr17 20334865 20335090 -74937561 + ID_B1 SINE B4 5 222 -2 4 740 230 273 141 65 chr17 20335287 20335471 -74937180 - B3A SINE B2 0 198 1 4 740 506 323 0 0 chr17 20335517 20335647 -74937004 + B3A SINE B2 9 138 -60 4 740 651 331 103 31 chr17 20335661 20336048 -74936603 - BGLII_B LTR ERVK -21 420 6 4 740 189 196 0 0 chr17 20336202 20336258 -74936393 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 740 441 0 0 0 chr17 20337984 20338033 -74934618 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 4 740 185 180 0 20 chr17 20338450 20338501 -74934150 + (CATA)n Simple_repeat Simple_repeat 4 53 0 4 740 441 0 0 0 chr17 20338501 20338550 -74934101 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 740 283 308 57 32 chr17 20338697 20338821 -74933830 - B1_Mus2 SINE Alu 0 147 21 4 740 244 271 42 14 chr17 20338965 20339036 -74933615 - PB1D10 SINE Alu -2 115 43 4 740 511 283 119 12 chr17 20339463 20339631 -74933020 + RMER21B LTR ERV1 371 556 -286 4 740 644 290 148 9 chr17 20339652 20339991 -74932660 + RodERV21-int LTR ERV1 68 453 -4538 4 740 3155 264 54 28 chr17 20340129 20341034 -74931617 + RodERV21-int LTR ERV1 3755 4683 -308 4 740 288 208 0 0 chr17 20341034 20341130 -74931521 + T-rich Low_complexity Low_complexity 1 96 0 4 740 285 295 50 9 chr17 20341344 20341520 -74931131 + L1M2 LINE L1 2379 2511 -4338 4 740 22 0 0 0 chr17 20341863 20341885 -74930766 + AT_rich Low_complexity Low_complexity 1 22 0 4 740 1235 209 93 4 chr17 20341941 20342219 -74930432 + Lx2A1 LINE L1 6702 7004 -4 4 740 367 227 23 0 chr17 20342249 20342337 -74930314 + L1_Mur1 LINE L1 3470 3559 -2327 4 740 1351 199 72 22 chr17 20342343 20342760 -74929891 - RMER17C LTR ERVK -519 439 16 4 740 2851 146 193 22 chr17 20342763 20343365 -74929286 - RMER17C-int LTR ERVK 0 3238 2534 4 740 888 130 37 12 chr17 20343369 20343532 -74929119 - RMER17C-int LTR ERVK -902 2336 2170 4 740 440 157 150 42 chr17 20343550 20343670 -74928981 - RMER17C-int LTR ERVK -1248 1990 1858 4 740 319 233 20 100 chr17 20343671 20343771 -74928880 + MT2B LTR ERVL 166 257 -344 4 740 887 112 0 2 chr17 20343691 20343818 -74928833 + B1_Mus1 SINE Alu 24 143 -5 4 740 195 0 27 54 chr17 20343818 20343855 -74928796 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 4 740 239 288 41 48 chr17 20343945 20344091 -74928560 - L1_Mur3 LINE L1 -6695 1017 873 4 740 200 194 0 0 chr17 20344092 20344128 -74928523 + CT-rich Low_complexity Low_complexity 1 36 0 4 740 180 0 0 0 chr17 20344482 20344502 -74928149 + (T)n Simple_repeat Simple_repeat 1 20 0 4 740 1168 241 21 5 chr17 20344530 20344799 -74927852 + Lx3C LINE L1 6697 6974 -2 4 740 1334 89 0 21 chr17 20347029 20347223 -74925428 + B2_Mm2 SINE B2 2 191 -4 4 740 8476 109 36 2 chr17 20347247 20348610 -74924041 - Lx3_Mus LINE L1 -1019 4867 3459 4 740 7985 119 16 6 chr17 20348618 20349657 -74922994 + Lx3_Mus LINE L1 4857 5902 -1107 4 740 898 85 14 7 chr17 20349657 20349799 -74922852 + (GGAAA)n Simple_repeat Simple_repeat 3 145 0 4 740 7985 151 30 4 chr17 20349799 20350029 -74922622 + Lx3_Mus LINE L1 5903 6156 -853 4 740 279 0 0 0 chr17 20350029 20350060 -74922591 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 740 7985 151 30 4 chr17 20350060 20350873 -74921778 + Lx3_Mus LINE L1 6157 6982 -27 4 740 195 42 0 0 chr17 20350873 20350897 -74921754 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 4 740 7985 151 30 4 chr17 20350897 20350918 -74921733 + Lx3_Mus LINE L1 6983 7005 -4 4 740 330 235 0 0 chr17 20351329 20351410 -74921241 + (TA)n Simple_repeat Simple_repeat 1 81 0 4 740 246 394 40 31 chr17 20351614 20351837 -74920814 + Lx8 LINE L1 7094 7318 -155 4 740 9530 172 26 13 chr17 20352341 20354087 -74918564 + L1_Mm LINE L1 4007 5777 -106 4 740 2664 128 2 0 chr17 20354087 20354486 -74918165 + MTB LTR MaLR 1 400 0 4 740 9530 172 26 13 chr17 20354486 20354549 -74918102 + L1_Mm LINE L1 5778 5839 -44 4 740 5167 140 2 2 chr17 20354651 20355479 -74917172 + Lx LINE L1 5827 6654 0 4 740 4948 211 39 11 chr17 20355764 20357129 -74915522 - Lx3C LINE L1 -18 6636 5236 4 740 639 87 0 0 chr17 20357129 20357233 -74915418 + (TA)n Simple_repeat Simple_repeat 1 104 0 4 740 270 0 0 0 chr17 20357233 20357262 -74915389 + (GA)n Simple_repeat Simple_repeat 2 31 0 4 740 4948 182 41 3 chr17 20357262 20357592 -74915059 - Lx3C LINE L1 -651 5235 4897 4 740 4999 192 64 8 chr17 20357599 20358471 -74914180 - Lx3C LINE L1 -1463 4414 3481 4 740 207 0 0 0 chr17 20358471 20358494 -74914157 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 740 4999 192 64 8 chr17 20358494 20358798 -74913853 - Lx3C LINE L1 -2397 3480 3174 4 740 229 167 0 40 chr17 20359736 20359786 -74912865 + (TCTCTG)n Simple_repeat Simple_repeat 3 50 0 4 740 522 129 0 0 chr17 20359790 20359875 -74912776 + (TCTA)n Simple_repeat Simple_repeat 4 88 0 4 740 578 338 76 29 chr17 20360354 20360631 -74912020 - ORR1C2 LTR MaLR 0 384 95 4 740 294 374 37 5 chr17 20360734 20360922 -74911729 + Lx8 LINE L1 7046 7239 -234 4 740 233 278 0 0 chr17 20361992 20362046 -74910605 + MTEb LTR MaLR 3 56 -323 4 740 712 356 47 47 chr17 20362463 20362823 -74909828 + ORR1D2 LTR MaLR 5 364 -6 4 740 353 304 17 17 chr17 20366412 20366529 -74906122 - B1_Mur3 SINE Alu -32 117 1 4 740 683 282 66 14 chr17 20366618 20366830 -74905821 + RMER12 LTR ERVK 1100 1322 0 4 740 2742 289 71 59 chr17 20366832 20367070 -74905581 - ORR1B1-int LTR MaLR -329 1180 945 4 740 1297 159 0 0 chr17 20367070 20367296 -74905355 + Lx LINE L1 6426 6651 -3 4 740 2742 289 71 59 chr17 20367296 20368223 -74904428 - ORR1B1-int LTR MaLR -565 944 1 4 740 1224 252 91 25 chr17 20368223 20368585 -74904066 - ORR1B1 LTR MaLR 0 394 9 4 740 33 0 0 0 chr17 20369115 20369148 -74903503 + AT_rich Low_complexity Low_complexity 1 33 0 4 740 32 75 0 0 chr17 20369269 20369336 -74903315 + AT_rich Low_complexity Low_complexity 1 67 0 4 740 864 29 0 0 chr17 20372694 20372797 -74899854 + (TTTCC)n Simple_repeat Simple_repeat 4 106 0 4 740 330 26 0 0 chr17 20372798 20372837 -74899814 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 4 740 878 102 55 0 chr17 20372838 20372966 -74899685 - B1_Mm SINE Alu -12 135 1 4 740 292 234 70 152 chr17 20373186 20373357 -74899294 - MYSERV6-int LTR ERVK -4 8955 8799 4 740 1465 289 25 26 chr17 20373506 20374215 -74898436 - MYSERV6-int LTR ERVK -275 8684 8092 4 740 366 261 153 5 chr17 20374200 20374389 -74898262 - MYSERV6-int LTR ERVK -3390 2132 1916 4 740 297 282 36 112 chr17 20375400 20375596 -74897055 - MYSERV-int LTR ERVK -1821 4729 4549 4 740 733 309 23 33 chr17 20375815 20376120 -74896531 - RMER6-int LTR ERVK -215 2962 2661 4 740 323 291 33 31 chr17 20376159 20376364 -74896287 - RMER6-int LTR ERVK -359 2818 2654 4 740 495 0 0 0 chr17 20376394 20376449 -74896202 + (TC)n Simple_repeat Simple_repeat 1 55 0 4 740 351 291 89 44 chr17 20376602 20376760 -74895891 + MTE2a LTR MaLR 200 364 -15 4 740 3160 243 118 126 chr17 20377831 20378408 -74894243 - L1_Mur3 LINE L1 -532 5348 4856 4 740 1042 81 6 23 chr17 20378408 20378584 -74894067 + (TTC)n Simple_repeat Simple_repeat 2 174 0 4 740 3160 243 118 126 chr17 20378584 20380015 -74892636 - L1_Mur3 LINE L1 -1025 4855 3357 4 740 993 226 51 37 chr17 20380015 20380368 -74892283 - RLTR15 LTR ERVK 0 359 2 4 740 1231 273 39 31 chr17 20380370 20380935 -74891716 - MYSERV-int LTR ERVK -91 6459 5990 4 740 3413 260 65 64 chr17 20380937 20382126 -74890525 + RMER12 LTR ERVK 1 1190 -132 4 740 3313 163 23 13 chr17 20382147 20382764 -74889887 + Lx LINE L1 6027 6649 -5 4 740 1710 267 136 78 chr17 20382780 20383202 -74889449 + RLTR13D1 LTR ERVK 1 441 -582 4 740 8229 36 0 0 chr17 20383202 20384185 -74888466 + L1Md_F3 LINE L1 5587 6569 -15 4 740 2339 156 102 45 chr17 20384185 20384728 -74887923 + RLTR13D1 LTR ERVK 252 1022 -1 4 740 5722 177 9 8 chr17 20384728 20385795 -74886856 + Lx3B LINE L1 5904 6972 -1 4 740 5580 111 0 0 chr17 20385923 20386731 -74885920 - L1_Mus1 LINE L1 -93 5790 4983 4 740 2471 87 73 0 chr17 20386730 20387087 -74885564 + L1_Mus1 LINE L1 5807 6189 -378 4 740 3959 113 5 2 chr17 20387087 20387679 -74884972 - L1_Mm LINE L1 -388 5495 4902 4 740 929 278 71 15 chr17 20387729 20388149 -74884502 - MYSERV16_I-int LTR ERVK -1902 424 2 4 740 34 55 0 0 chr17 20388339 20388394 -74884257 + AT_rich Low_complexity Low_complexity 1 55 0 4 740 325 283 122 78 chr17 20388394 20388509 -74884142 - B1_Mus1 SINE Alu -6 142 23 4 740 21 36 0 0 chr17 20388539 20388567 -74884084 + AT_rich Low_complexity Low_complexity 1 28 0 4 740 278 200 0 0 chr17 20389071 20389126 -74883525 - MYSERV6-int LTR ERVK -2252 6707 6653 4 740 552 151 87 0 chr17 20389204 20389330 -74883321 - BC1_Mm scRNA scRNA -15 137 1 4 740 1504 198 0 10 chr17 20390080 20390386 -74882265 + Lx2 LINE L1 6685 6987 -10 4 740 393 22 0 0 chr17 20390515 20390561 -74882090 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 740 1279 243 3 27 chr17 20390670 20390966 -74881685 - RLTR15 LTR ERVK -44 315 27 4 740 1433 214 156 47 chr17 20390984 20391553 -74881098 - L1_Mur2 LINE L1 -2517 3360 2730 4 740 1057 332 73 38 chr17 20391553 20392646 -74880005 - SRV_MM-int LTR ERVK -3202 2965 1835 4 740 2270 265 52 28 chr17 20393379 20393736 -74878915 - L1_Mur2 LINE L1 -3480 2397 2053 4 740 543 69 0 0 chr17 20393736 20393808 -74878843 + (TG)n Simple_repeat Simple_repeat 2 73 0 4 740 2270 265 52 28 chr17 20393808 20394567 -74878084 - L1_Mur2 LINE L1 -3825 2052 1255 4 740 12556 131 31 17 chr17 20394561 20395923 -74876728 - Lx3_Mus LINE L1 -1 7008 5637 4 740 2334 150 5 15 chr17 20395923 20396323 -74876328 - MTA_Mm LTR MaLR 0 396 1 4 740 12556 109 85 35 chr17 20396323 20398264 -74874387 - Lx3_Mus LINE L1 -247 5639 3592 4 740 1074 37 0 7 chr17 20398264 20398400 -74874251 + MTB LTR MaLR 266 400 0 4 740 563 269 119 9 chr17 20398400 20398610 -74874041 + RMER1B Other Other 815 1047 -19 4 740 560 171 0 8 chr17 20399029 20399147 -74873504 - Lx2 LINE L1 -2 6995 6879 4 740 344 317 92 33 chr17 20400050 20400353 -74872298 + Lx9 LINE L1 6947 7267 -377 4 740 191 161 0 18 chr17 20400414 20400471 -74872180 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 740 683 91 0 0 chr17 20401472 20401571 -74871080 + L1Md_F2 LINE L1 5176 5274 -609 4 740 3111 90 0 0 chr17 20401573 20402061 -74870590 + L1Md_F2 LINE L1 5524 6011 -555 4 740 3935 27 11 0 chr17 20402057 20402691 -74869960 - L1Md_F2 LINE L1 -522 6060 5420 4 740 3682 45 0 35 chr17 20402691 20403174 -74869477 + L1Md_F2 LINE L1 6117 6582 0 4 740 3788 109 18 4 chr17 20403184 20403743 -74868908 + L1_Mus2 LINE L1 5998 6564 -2 4 740 24 0 0 0 chr17 20403743 20403767 -74868884 + AT_rich Low_complexity Low_complexity 1 24 0 4 740 228 35 0 0 chr17 20403769 20403798 -74868853 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 4 740 230 246 16 16 chr17 20403800 20403862 -74868789 - MER58A DNA MER1_type -136 88 27 4 740 885 107 47 7 chr17 20403992 20404142 -74868509 + L1_Mm LINE L1 2249 2404 -3479 4 740 5210 184 41 14 chr17 20405882 20406980 -74865671 + Lx3A LINE L1 5847 6974 -7 4 740 221 113 0 54 chr17 20407154 20407210 -74865441 + T-rich Low_complexity Low_complexity 1 53 0 4 740 4116 55 8 4 chr17 20407212 20407741 -74864910 - L1Md_F2 LINE L1 -2 6580 6050 5 740 2296 64 3 0 chr17 20407741 20408039 -74864612 + L1Md_F2 LINE L1 5744 6042 -540 5 740 244 190 12 12 chr17 20408586 20408666 -74863985 + (CATATA)n Simple_repeat Simple_repeat 4 83 0 5 740 30 27 0 0 chr17 20409171 20409208 -74863443 + AT_rich Low_complexity Low_complexity 1 37 0 5 740 24 0 0 0 chr17 20410892 20410916 -74861735 + AT_rich Low_complexity Low_complexity 1 24 0 5 740 231 195 24 24 chr17 20410976 20411060 -74861591 + (TATATG)n Simple_repeat Simple_repeat 6 89 0 5 740 610 342 20 15 chr17 20411593 20411795 -74860856 - ORR1D1 LTR MaLR -77 297 95 5 740 243 324 111 28 chr17 20411919 20412100 -74860551 + Lx8 LINE L1 7041 7236 -237 5 740 46 83 0 0 chr17 20412274 20412383 -74860268 + AT_rich Low_complexity Low_complexity 1 109 0 5 740 403 401 30 21 chr17 20413710 20414046 -74858605 + ORR1D2 LTR MaLR 9 347 -23 5 740 325 369 0 0 chr17 20417488 20417591 -74855060 - B1_Mur2 SINE Alu -46 103 1 5 740 1072 288 80 11 chr17 20418183 20418548 -74854103 - ORR1B1 LTR MaLR 0 394 5 5 740 2695 261 15 46 chr17 20418552 20419294 -74853357 - ORR1B1-int LTR MaLR 0 1509 791 5 740 5071 58 5 1 chr17 20420726 20421378 -74851273 + L1Md_F2 LINE L1 5925 6578 -4 5 740 234 0 0 0 chr17 20422611 20422637 -74850014 + (A)n Simple_repeat Simple_repeat 1 26 0 5 740 249 57 0 0 chr17 20423366 20423401 -74849250 + (ATTG)n Simple_repeat Simple_repeat 1 35 0 5 740 532 194 15 15 chr17 20423626 20423762 -74848889 - MYSERV-int LTR ERVK -46 6504 6369 5 740 22 0 0 0 chr17 20424183 20424205 -74848446 + AT_rich Low_complexity Low_complexity 1 22 0 5 740 34065 75 1 6 chr17 20424257 20430476 -74842175 - L1Md_F2 LINE L1 -2 6580 392 5 740 598 221 7 60 chr17 20430757 20430772 -74841879 + ID_B1 SINE B4 79 219 -5 5 740 1026 82 0 0 chr17 20430772 20430906 -74841745 + B1_Mus1 SINE Alu 10 143 -5 5 740 340 283 91 70 chr17 20431529 20431715 -74840936 - RMER4A LTR ERVK -27 439 250 5 740 325 333 75 37 chr17 20431720 20431907 -74840744 - MYSERV-int LTR ERVK -1460 5090 4897 5 740 7296 90 2 7 chr17 20431944 20433268 -74839383 - L1_Mus1 LINE L1 -2 6565 5249 5 740 1143 55 7 0 chr17 20433318 20433463 -74839188 - B1_Mm SINE Alu 0 147 2 5 740 2095 127 57 80 chr17 20433534 20433936 -74838715 - RLTR9C LTR ERVK 0 393 1 5 740 459 255 52 2 chr17 20434517 20434671 -74837980 - MYSERV-int LTR ERVK -2148 4402 4294 5 740 210 118 0 0 chr17 20434683 20434717 -74837934 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 740 297 0 0 0 chr17 20434719 20434752 -74837899 + (TA)n Simple_repeat Simple_repeat 1 33 0 5 740 390 42 0 0 chr17 20434753 20434801 -74837850 + (GA)n Simple_repeat Simple_repeat 2 49 0 5 740 524 328 13 27 chr17 20434814 20435112 -74837539 - MurERV4_19-int LTR ERVK -894 4886 4593 5 740 2792 108 7 26 chr17 20435112 20435541 -74837110 + BGLII LTR ERVK 1 421 0 5 740 2858 206 47 51 chr17 20435547 20435853 -74836798 + RMER17B LTR ERVK 1 340 -618 5 740 459 0 0 0 chr17 20435853 20435904 -74836747 + (TC)n Simple_repeat Simple_repeat 1 51 0 5 740 2858 245 25 10 chr17 20435904 20436475 -74836176 + RMER17B LTR ERVK 341 921 -37 5 740 1681 256 28 20 chr17 20436481 20436987 -74835664 - L1_Mur2 LINE L1 -252 5625 5116 5 740 468 384 32 81 chr17 20437057 20437428 -74835223 + ORR1D2 LTR MaLR 1 353 -17 5 740 5515 174 27 7 chr17 20437585 20438572 -74834079 - Lx LINE L1 -7 6647 5641 5 740 1066 318 43 28 chr17 20441052 20441518 -74831133 - Lx5 LINE L1 -44 7006 6534 5 740 285 293 35 0 chr17 20441900 20442016 -74830635 - Lx9 LINE L1 -6 7638 7519 5 740 364 222 22 0 chr17 20442115 20442205 -74830446 + Lx9 LINE L1 7360 7451 -193 5 740 3324 154 58 9 chr17 20442361 20442942 -74829709 + Lx LINE L1 6044 6653 -1 5 740 2805 103 0 12 chr17 20443240 20443652 -74828999 + ETnERV2-int LTR ERVK 5375 5781 -1625 5 740 961 219 39 20 chr17 20443644 20443910 -74828741 + ETnERV2-int LTR ERVK 6222 6422 -984 5 740 695 125 0 0 chr17 20444199 20444311 -74828340 + RLTR9F LTR ERVK 1 112 -303 5 740 1319 169 52 24 chr17 20444323 20444571 -74828080 - RLTR26 LTR ERVK -137 505 251 5 740 390 276 36 57 chr17 20444573 20444805 -74827846 - L1_Mur1 LINE L1 -6232 750 662 5 740 198 0 0 0 chr17 20444869 20444891 -74827760 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 5 740 972 129 0 20 chr17 20444892 20445042 -74827609 - B1_Mus1 SINE Alu 0 148 2 5 740 21 0 0 0 chr17 20445122 20445143 -74827508 + AT_rich Low_complexity Low_complexity 1 21 0 5 740 24 0 0 0 chr17 20445250 20445274 -74827377 + AT_rich Low_complexity Low_complexity 1 24 0 5 740 932 205 36 14 chr17 20445476 20445699 -74826952 + L1_Mm LINE L1 4768 4995 -888 5 740 1570 219 31 3 chr17 20445786 20446143 -74826508 + L1_Mur2 LINE L1 4982 5348 -529 5 740 396 0 0 0 chr17 20446143 20446187 -74826464 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 5 740 663 309 99 39 chr17 20446355 20446769 -74825882 - MYSERV6-int LTR ERVK -273 8686 8248 5 92 6768 131 12 3 chr17 20446769 20447970 -74824681 - L1_Mus4 LINE L1 0 6636 5499 5 741 355 273 94 44 chr17 20448703 20448789 -74823862 - RMER4A LTR ERVK -29 437 346 5 741 1580 0 0 6 chr17 20448789 20448970 -74823681 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 5 741 355 273 94 44 chr17 20448970 20449063 -74823588 - RMER4A LTR ERVK -121 345 249 5 741 533 335 54 58 chr17 20449066 20449326 -74823325 - MYSERV-int LTR ERVK -1448 5102 4844 5 741 378 311 15 73 chr17 20449493 20449698 -74822953 - MYSERV-int LTR ERVK -1831 4719 4527 5 741 3123 251 111 4 chr17 20450062 20451304 -74821347 - L1_Mur2 LINE L1 -2463 3414 2040 5 741 2319 137 40 2 chr17 20451306 20451709 -74820942 - L1_Mm LINE L1 -1805 4078 3661 5 741 2551 95 8 0 chr17 20451709 20452078 -74820573 + L1_Mm LINE L1 4197 4568 -1315 5 741 1522 151 0 0 chr17 20452079 20452330 -74820321 + L1_Mm LINE L1 5037 5287 -596 5 741 414 0 0 0 chr17 20452353 20452399 -74820252 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 741 785 326 43 47 chr17 20452399 20452698 -74819953 + ORR1D1 LTR MaLR 29 326 -48 5 741 439 252 65 23 chr17 20452708 20452923 -74819728 + Lx7 LINE L1 7302 7525 -171 5 741 195 42 0 0 chr17 20452930 20452954 -74819697 + (TTA)n Simple_repeat Simple_repeat 3 26 0 5 741 1390 254 72 16 chr17 20453001 20453470 -74819181 + L1_Mur1 LINE L1 117 863 -6119 5 741 2629 199 21 6 chr17 20455181 20455697 -74816954 + Lx3A LINE L1 6458 6981 0 5 741 447 162 0 0 chr17 20455716 20455796 -74816855 + GA-rich Low_complexity Low_complexity 2 81 0 5 741 1193 101 6 0 chr17 20455800 20455979 -74816672 + (GAA)n Simple_repeat Simple_repeat 1 180 0 5 741 254 167 288 0 chr17 20455979 20456045 -74816606 + L1_Mur2 LINE L1 175 259 -6453 5 741 293 247 42 21 chr17 20456045 20456140 -74816511 - RLTR23 LTR ERV1 0 430 334 5 741 3062 196 165 22 chr17 20456571 20457229 -74815422 + L1_Mur2 LINE L1 1 721 -5991 5 741 884 121 76 0 chr17 20457229 20457361 -74815290 + B1_Mm SINE Alu 1 142 -5 5 741 234 0 0 0 chr17 20457363 20457389 -74815262 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 5 741 3062 196 175 23 chr17 20457389 20457609 -74815042 + L1_Mur2 LINE L1 722 951 -5761 5 741 709 119 51 29 chr17 20457626 20457764 -74814887 + B2_Mm2 SINE B2 47 187 -8 5 741 495 147 0 0 chr17 20457811 20457886 -74814765 + 4.5SRNA scRNA scRNA 1 75 -19 5 741 3614 153 14 0 chr17 20458055 20458629 -74814022 - Lx LINE L1 -8 6646 6065 5 741 24 0 0 0 chr17 20458641 20458665 -74813986 + AT_rich Low_complexity Low_complexity 1 24 0 5 741 534 137 0 0 chr17 20458667 20458762 -74813889 + (CTTA)n Simple_repeat Simple_repeat 1 95 0 5 741 445 336 0 0 chr17 20458776 20458880 -74813771 - RSINE1 SINE B4 -61 104 1 5 741 477 0 0 0 chr17 20458889 20458942 -74813709 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 741 292 256 49 16 chr17 20459162 20459285 -74813366 + L1Md_F LINE L1 580 706 -5813 5 741 943 175 340 59 chr17 20459443 20459899 -74812752 + RLTR6_Mm LTR ERV1 1 584 -70 5 741 13615 152 19 13 chr17 20459907 20462861 -74809790 + L1VL4 LINE L1 254 3233 -326 5 741 7412 144 13 80 chr17 20462867 20464364 -74808287 - L1_Mm LINE L1 -212 5671 4275 5 741 1013 87 0 0 chr17 20464364 20464502 -74808149 - B1_Mm SINE Alu 0 147 10 5 741 2884 137 25 10 chr17 20464502 20464722 -74807929 - MusHAL1 LINE L1 -759 1953 1724 5 741 3508 13 2 0 chr17 20464722 20465117 -74807534 + MTA_Mm LTR MaLR 1 396 0 5 741 2884 137 25 10 chr17 20465117 20465405 -74807246 - MusHAL1 LINE L1 -989 1723 1437 5 741 25 31 0 0 chr17 20465511 20465543 -74807108 + AT_rich Low_complexity Low_complexity 1 32 0 5 741 23 54 0 0 chr17 20465569 20465606 -74807045 + AT_rich Low_complexity Low_complexity 1 37 0 5 741 231 36 0 0 chr17 20465679 20465707 -74806944 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 741 527 294 58 27 chr17 20465710 20466211 -74806440 - Lx9 LINE L1 -192 7452 6871 5 741 1315 104 16 5 chr17 20468452 20468645 -74804006 - B2_Mm2 SINE B2 0 195 1 5 741 29 28 0 0 chr17 20468792 20468828 -74803823 + AT_rich Low_complexity Low_complexity 1 36 0 5 741 387 60 0 0 chr17 20468914 20468964 -74803687 + (CATA)n Simple_repeat Simple_repeat 4 53 0 5 741 247 250 26 0 chr17 20469585 20469661 -74802990 + (TA)n Simple_repeat Simple_repeat 2 79 0 5 741 24 0 0 0 chr17 20470279 20470303 -74802348 + AT_rich Low_complexity Low_complexity 1 24 0 5 741 25 51 0 0 chr17 20470624 20470663 -74801988 + AT_rich Low_complexity Low_complexity 1 39 0 5 741 39 74 0 0 chr17 20470903 20470984 -74801667 + AT_rich Low_complexity Low_complexity 1 81 0 5 741 438 305 59 7 chr17 20471620 20471772 -74800879 - ORR1D1 LTR MaLR 0 384 225 5 741 555 53 0 0 chr17 20471857 20471932 -74800719 + (GA)n Simple_repeat Simple_repeat 2 76 0 5 741 498 314 28 28 chr17 20471932 20472076 -74800575 - ORR1D1 LTR MaLR -170 204 61 5 741 371 356 43 19 chr17 20472153 20472362 -74800289 + Lx8 LINE L1 7041 7254 -219 5 741 813 49 202 8 chr17 20472693 20472817 -74799834 + B1_Mus1 SINE Alu 1 148 0 5 741 205 56 54 27 chr17 20472821 20472858 -74799793 + (CAAAAA)n Simple_repeat Simple_repeat 2 39 0 5 741 27 0 0 0 chr17 20473687 20473714 -74798937 + AT_rich Low_complexity Low_complexity 1 27 0 5 741 15782 162 20 12 chr17 20474173 20476550 -74796101 + L1_Mus3 LINE L1 2875 5287 -596 5 741 4730 55 2 8 chr17 20476550 20477158 -74795493 + L1Md_F2 LINE L1 5979 6582 0 6 741 15782 127 15 22 chr17 20477158 20478532 -74794119 + L1_Mus3 LINE L1 5288 6633 -5 5 741 4878 128 33 1 chr17 20478640 20479957 -74792694 + L1VL2 LINE L1 285 1654 -1961 6 741 403 312 33 37 chr17 20480058 20480301 -74792350 + MYSERV6-int LTR ERVK 2093 2334 -2926 6 741 852 33 49 0 chr17 20480301 20480423 -74792228 + L1Md_T LINE L1 6455 6582 0 6 741 1030 290 59 38 chr17 20480789 20481499 -74791152 + MYSERV6-int LTR ERVK 8125 8696 -263 6 741 379 261 0 125 chr17 20481645 20481829 -74790822 + MYSERV6-int LTR ERVK 8799 8959 0 6 741 507 120 0 10 chr17 20484850 20484951 -74787700 - L1_Mus3 LINE L1 0 6638 6539 6 741 777 155 0 0 chr17 20485586 20485734 -74786917 + (TG)n Simple_repeat Simple_repeat 2 149 0 6 741 234 257 70 17 chr17 20485758 20485873 -74786778 + Lx9 LINE L1 7522 7642 -2 6 741 28792 93 20 2 chr17 20486068 20490792 -74781859 - L1Md_F LINE L1 -517 5366 553 6 741 21 36 0 0 chr17 20491294 20491322 -74781329 + AT_rich Low_complexity Low_complexity 1 28 0 6 741 253 353 0 56 chr17 20491322 20491412 -74781239 + B1_Mus1 SINE Alu 4 88 -60 6 741 212 154 0 19 chr17 20491478 20491531 -74781120 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 6 741 2759 67 0 3 chr17 20491543 20491890 -74780761 - ORR1A1 LTR MaLR 0 346 1 6 741 23 0 0 0 chr17 20492356 20492379 -74780272 + AT_rich Low_complexity Low_complexity 1 23 0 6 741 373 418 30 47 chr17 20495254 20495618 -74777033 - ORR1D2 LTR MaLR -12 358 1 6 741 300 391 70 31 chr17 20495710 20495991 -74776660 - MTE2b LTR MaLR -83 296 5 6 741 30 0 0 0 chr17 20496208 20496238 -74776413 + AT_rich Low_complexity Low_complexity 1 30 0 6 741 4828 141 28 16 chr17 20496238 20497065 -74775586 - Lx2 LINE L1 -17 6980 6144 6 741 239 0 0 31 chr17 20497141 20497173 -74775478 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 741 517 101 13 0 chr17 20497173 20497252 -74775399 - B1_Mm SINE Alu -2 145 66 6 741 676 214 0 0 chr17 20497626 20497757 -74774894 - L1_Mur1 LINE L1 -231 5655 5525 6 741 8673 88 5 8 chr17 20497766 20499069 -74773582 - L1_Mus1 LINE L1 0 6567 5293 6 741 1088 83 14 0 chr17 20499069 20499214 -74773437 - B1_Mm SINE Alu 0 147 1 6 741 8673 128 2 31 chr17 20499214 20499996 -74772655 - L1_Mus1 LINE L1 -591 5292 4517 6 741 16589 158 101 30 chr17 20500000 20504000 -74768651 - L1Md_F LINE L1 -1371 4512 231 1 741 6327 135 126 22 chr17 20504014 20505534 -74767117 - L1_Mus2 LINE L1 0 6566 4746 2 741 414 0 0 0 chr17 20505534 20505580 -74767071 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 741 4517 204 251 33 chr17 20505580 20506439 -74766212 - L1_Mus2 LINE L1 -1141 4745 3802 2 741 1577 238 18 3 chr17 20506448 20506840 -74765811 + L1_Mur2 LINE L1 4205 4602 -1275 4 741 1181 209 27 0 chr17 20506834 20507093 -74765558 + L1_Mur2 LINE L1 4357 4622 -1255 5 741 375 78 0 0 chr17 20507179 20507230 -74765421 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 741 29 28 0 0 chr17 20507419 20507455 -74765196 + AT_rich Low_complexity Low_complexity 1 36 0 7 741 1845 175 9 6 chr17 20507525 20507842 -74764809 - ORR1A2 LTR MaLR -8 319 2 8 741 7818 199 42 69 chr17 20507843 20509859 -74762792 - ORR1A2-int LTR MaLR 0 1963 2 8 741 1581 229 3 0 chr17 20509864 20510179 -74762472 - ORR1A2 LTR MaLR -8 318 3 8 741 643 140 0 0 chr17 20511007 20511098 -74761553 - L1_Mus2 LINE L1 -479 6087 5997 9 741 3709 51 4 4 chr17 20511098 20511569 -74761082 + L1Md_F2 LINE L1 6110 6580 -2 1 741 609 27 0 0 chr17 20511589 20511664 -74760987 + (GAA)n Simple_repeat Simple_repeat 2 76 0 1 741 25 31 0 0 chr17 20513305 20513337 -74759314 + AT_rich Low_complexity Low_complexity 1 32 0 1 741 282 341 7 14 chr17 20513958 20514098 -74758553 + Lx9 LINE L1 6779 6917 -727 1 741 3314 40 2 0 chr17 20514291 20514686 -74757965 + MTA_Mm LTR MaLR 1 396 0 1 741 607 303 60 45 chr17 20515272 20515607 -74757044 + Lx9 LINE L1 7022 7361 -283 1 741 22 0 0 0 chr17 20515876 20515898 -74756753 + GC_rich Low_complexity Low_complexity 1 22 0 1 741 2974 193 29 51 chr17 20516600 20517361 -74755290 - L1_Mur2 LINE L1 -529 5348 4605 1 741 3055 246 100 2 chr17 20517359 20518161 -74754490 + Lx4A LINE L1 6129 7008 -50 1 741 224 211 19 0 chr17 20518208 20518260 -74754391 + CT-rich Low_complexity Low_complexity 2 54 0 1 741 233 169 17 0 chr17 20518289 20518348 -74754303 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 741 307 250 40 29 chr17 20518378 20518551 -74754100 + (TCTA)n Simple_repeat Simple_repeat 3 177 0 2 741 1469 159 15 4 chr17 20518763 20519034 -74753617 - Lx LINE L1 -5 6649 6376 2 741 291 287 39 94 chr17 20519084 20519265 -74753386 - MTEa LTR MaLR 0 379 209 2 741 180 0 0 0 chr17 20519533 20519553 -74753098 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 2 741 948 109 14 7 chr17 20519553 20519685 -74752966 - B1_Mus2 SINE Alu -12 135 2 2 741 602 398 80 35 chr17 20520061 20520460 -74752191 - RMER1A Other Other -611 419 3 2 741 1708 158 56 70 chr17 20520467 20520949 -74751702 - IAPLTR2_Mm LTR ERVK 0 475 1 2 741 21453 65 2 3 chr17 20521183 20524730 -74747921 - L1Md_F2 LINE L1 -1 6581 3039 2 741 515 354 5 28 chr17 20524712 20524927 -74747724 - Lx5 LINE L1 -8 7042 6833 2 741 4597 32 0 2 chr17 20525735 20526290 -74746361 - L1_Mm LINE L1 -343 5540 4987 2 741 2584 41 3 0 chr17 20526290 20526605 -74746046 + L1Md_T LINE L1 6265 6580 -2 3 741 226 36 0 0 chr17 20526977 20527005 -74745646 + B4A SINE B4 192 219 -73 3 741 302 355 80 31 chr17 20527033 20527321 -74745330 + L1M2 LINE L1 4853 5154 -989 3 741 1337 88 5 5 chr17 20527335 20527540 -74745111 - L1_Mur1 LINE L1 -2165 3721 3517 3 741 35036 44 0 6 chr17 20527547 20532764 -74739887 + L1Md_T LINE L1 304 5589 -297 3 741 8443 34 0 0 chr17 20532764 20533760 -74738891 + L1Md_T LINE L1 5590 6585 0 3 741 8616 124 16 12 chr17 20533760 20535218 -74737433 - L1_Mur1 LINE L1 -2363 3523 2060 3 741 2887 103 47 71 chr17 20535218 20535750 -74736901 + MURVY-LTR LTR ERV1 1 519 0 3 741 4543 291 73 39 chr17 20535752 20538297 -74734354 + MuRRS4-int LTR ERV1 3 2817 -4739 3 741 4541 207 51 19 chr17 20538301 20539507 -74733144 + L1_Mur2 LINE L1 3089 4333 -1544 3 741 7753 138 51 16 chr17 20539505 20541180 -74731471 - Lx2 LINE L1 -15 6982 5248 3 741 1004 146 6 0 chr17 20541180 20541358 -74731293 + (TA)n Simple_repeat Simple_repeat 2 180 0 3 741 6393 179 15 13 chr17 20541358 20541967 -74730684 - Lx2 LINE L1 -636 5247 4638 3 741 1034 51 7 0 chr17 20542990 20543128 -74729523 - B1_Mus1 SINE Alu -1 147 9 3 741 530 218 39 90 chr17 20542991 20543147 -74729504 - B4 SINE B4 -69 223 76 4 741 358 320 28 56 chr17 20543333 20543512 -74729139 + Lx8 LINE L1 7074 7247 -226 4 741 21 57 0 0 chr17 20543675 20543710 -74728941 + AT_rich Low_complexity Low_complexity 1 35 0 4 741 880 374 77 76 chr17 20544006 20544646 -74728005 - ORR1D-int LTR MaLR -84 1286 653 4 741 1137 76 0 0 chr17 20544646 20544791 -74727860 + B1_Mus2 SINE Alu 2 146 -1 4 741 880 374 77 76 chr17 20544791 20545222 -74727429 - ORR1D-int LTR MaLR -718 652 214 4 741 1028 174 91 0 chr17 20545223 20545442 -74727209 - Lx2A1 LINE L1 -15 6993 6755 4 741 2735 172 84 27 chr17 20545439 20546036 -74726615 - L1_Mur2 LINE L1 -1392 4485 3855 4 741 235 177 0 75 chr17 20546056 20546123 -74726528 + T-rich Low_complexity Low_complexity 1 62 0 4 741 1976 159 117 10 chr17 20546125 20546526 -74726125 + BGLII_A LTR ERVK 1 444 -1 4 741 680 142 4 0 chr17 20546528 20546652 -74725999 - L1_Mur2 LINE L1 -2043 3843 3716 4 741 2678 109 23 10 chr17 20546660 20547058 -74725593 - L1_Mus1 LINE L1 -2 6565 6163 4 741 2781 203 17 50 chr17 20547058 20548031 -74724620 - L1VL4 LINE L1 -2433 1126 193 5 741 646 168 7 7 chr17 20548126 20548264 -74724387 + CT-rich Low_complexity Low_complexity 2 139 0 5 741 1745 276 22 47 chr17 20548319 20548873 -74723778 - Lx4B LINE L1 -17 7041 6502 5 741 572 328 41 29 chr17 20548881 20549126 -74723525 - ORR1D-int LTR MaLR -1121 249 2 4 741 3347 240 77 39 chr17 20549393 20550248 -74722403 - RMER19B LTR ERVK -13 889 2 5 741 387 0 0 0 chr17 20550842 20550885 -74721766 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 741 21 0 0 0 chr17 20551186 20551207 -74721444 + AT_rich Low_complexity Low_complexity 1 21 0 5 741 366 42 0 0 chr17 20551708 20551756 -74720895 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 741 25 51 0 0 chr17 20551789 20551828 -74720823 + AT_rich Low_complexity Low_complexity 1 39 0 5 741 21 0 0 0 chr17 20552134 20552155 -74720496 + AT_rich Low_complexity Low_complexity 1 21 0 5 741 330 238 65 35 chr17 20552756 20552926 -74719725 - RLTR42-int LTR ERVK -3556 2581 2407 5 741 503 261 59 13 chr17 20552950 20553187 -74719464 - RLTR42-int LTR ERVK -3399 2123 1876 5 741 370 125 20 20 chr17 20553517 20553615 -74719036 + (CAGA)n Simple_repeat Simple_repeat 1 98 0 6 741 213 0 53 26 chr17 20553699 20553737 -74718914 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6 741 1062 276 148 23 chr17 20554215 20554608 -74718043 - RMER20B LTR ERVK -185 442 1 6 741 768 257 11 11 chr17 20554906 20555091 -74717560 + RLTR24 LTR ERV1 1 185 -344 6 741 560 306 12 0 chr17 20555070 20555240 -74717411 + RLTR24 LTR ERV1 356 527 -2 6 741 24 0 0 0 chr17 20558199 20558223 -74714428 + AT_rich Low_complexity Low_complexity 1 24 0 6 741 270 250 72 50 chr17 20558389 20558528 -74714123 - Tigger7 DNA MER2_type -82 2409 2268 6 741 531 145 0 0 chr17 20559095 20559178 -74713473 + B1_Mus1 SINE Alu 19 101 -47 6 741 598 211 0 9 chr17 20559178 20559293 -74713358 - Lx4B LINE L1 -409 6649 6536 6 741 1315 280 23 15 chr17 20559294 20559686 -74712965 + Lx4B LINE L1 6664 7058 0 6 741 335 154 0 15 chr17 20559686 20559752 -74712899 + GA-rich Low_complexity Low_complexity 1 65 0 6 741 1043 135 11 0 chr17 20559752 20559930 -74712721 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 6 741 562 362 19 63 chr17 20560017 20560432 -74712219 + ORR1D2-int LTR MaLR 241 637 -733 7 741 608 357 40 54 chr17 20561142 20561586 -74711065 + ORR1D2-int LTR MaLR 845 1282 -88 7 741 1260 69 6 0 chr17 20561604 20561777 -74710874 - L1_Mus2 LINE L1 -1 6565 6392 7 741 242 362 32 76 chr17 20561848 20562033 -74710618 + ORR1D2 LTR MaLR 5 181 -189 7 741 1089 143 16 26 chr17 20562440 20562634 -74710017 - B2_Mm2 SINE B2 -2 193 2 7 741 25 0 0 0 chr17 20563364 20563389 -74709262 + AT_rich Low_complexity Low_complexity 1 25 0 7 741 783 260 54 21 chr17 20564849 20565128 -74707523 - RMER13B LTR ERVK -9 899 612 7 741 1529 159 86 93 chr17 20565134 20565530 -74707121 - RLTR9C LTR ERVK 0 393 1 7 741 519 17 0 0 chr17 20565533 20565593 -74707058 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 7 741 321 89 0 0 chr17 20565602 20565647 -74707004 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 741 378 0 0 0 chr17 20565647 20565688 -74706963 + (TA)n Simple_repeat Simple_repeat 1 42 0 7 741 180 0 0 0 chr17 20565688 20565707 -74706944 + (GA)n Simple_repeat Simple_repeat 2 21 0 7 741 492 99 0 0 chr17 20566385 20566456 -74706195 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 8 741 1075 191 127 46 chr17 20567482 20567789 -74704862 - IAPEY3_LTR LTR ERVK 0 332 1 8 741 453 50 0 0 chr17 20568690 20568750 -74703901 + (TC)n Simple_repeat Simple_repeat 2 61 0 8 741 642 37 0 0 chr17 20568993 20569074 -74703577 + (TC)n Simple_repeat Simple_repeat 2 82 0 8 741 1205 73 6 0 chr17 20571389 20571554 -74701097 + L1_Mus2 LINE L1 6401 6566 0 8 741 597 248 14 35 chr17 20573297 20573439 -74699212 + B1_Mur3 SINE Alu 11 149 0 8 741 2101 311 45 35 chr17 20573616 20574265 -74698386 + Lx7 LINE L1 6393 7054 -642 8 741 264 30 0 0 chr17 20574265 20574298 -74698353 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 741 981 46 0 0 chr17 20574298 20574428 -74698223 + (GA)n Simple_repeat Simple_repeat 2 132 0 8 741 2101 311 45 35 chr17 20574428 20574712 -74697939 + Lx7 LINE L1 7055 7335 -361 8 741 342 67 0 0 chr17 20574819 20574864 -74697787 + (T)n Simple_repeat Simple_repeat 1 45 0 8 741 1145 62 7 0 chr17 20574864 20575010 -74697641 - B1_Mus2 SINE Alu 0 147 1 9 741 347 291 41 33 chr17 20575012 20575133 -74697518 - B1_Mur4 SINE Alu -1 149 28 9 741 336 152 10 42 chr17 20575174 20575224 -74697427 + polypyrimidine Low_complexity Low_complexity 47 96 0 9 741 1431 11 0 22 chr17 20575224 20575408 -74697243 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 9 741 336 152 10 42 chr17 20575408 20575453 -74697198 + polypyrimidine Low_complexity Low_complexity 4 46 0 9 741 569 249 62 101 chr17 20575479 20575836 -74696815 + Lx7 LINE L1 7353 7695 -1 8 741 932 221 13 25 chr17 20576218 20576455 -74696196 - RLTR22_Mur LTR ERVK -25 1823 1590 9 741 293 167 0 0 chr17 20576655 20576703 -74695948 - RLTR22_Mur LTR ERVK -688 1160 1113 9 741 5029 106 11 0 chr17 20576759 20577479 -74695172 + L1_Mus2 LINE L1 5739 6501 -65 9 741 264 313 34 57 chr17 20577481 20577657 -74694994 + RLTR10D LTR ERVK 57 228 -131 9 741 331 143 0 0 chr17 20577657 20577720 -74694931 + L1_Mus2 LINE L1 6504 6566 0 9 741 667 274 53 48 chr17 20577773 20578130 -74694521 - RLTR10D LTR ERVK 0 359 1 9 92 4027 249 25 42 chr17 20578130 20579724 -74692927 - IAP-d-int LTR ERVK 0 6542 4864 9 742 4343 283 37 15 chr17 20579748 20581325 -74691326 - IAP-d-int LTR ERVK -1783 4759 3148 9 742 468 222 21 36 chr17 20581327 20581467 -74691184 - IAP-d-int LTR ERVK -6383 159 22 9 742 765 267 44 53 chr17 20581514 20581871 -74690780 - RLTR10D LTR ERVK 0 411 1 9 742 3540 220 81 35 chr17 20581871 20582912 -74689739 - RLTR22_Mur LTR ERVK -756 1092 4 9 742 770 265 27 75 chr17 20582912 20583206 -74689445 + L1_Mur1 LINE L1 807 1086 -5898 1 742 3944 204 16 20 chr17 20583185 20584131 -74688520 + L1_Mur1 LINE L1 2254 3195 -2691 1 742 2140 258 32 79 chr17 20584148 20584789 -74687862 - RMER17B LTR ERVK -21 887 376 1 742 2788 111 10 0 chr17 20584789 20585185 -74687466 - MTB LTR MaLR 0 400 1 1 742 2140 246 48 87 chr17 20585185 20585588 -74687063 - RMER17B LTR ERVK -487 419 1 1 742 4340 201 65 11 chr17 20585588 20585932 -74686719 + L1_Mur1 LINE L1 3190 3569 -2317 1 742 393 22 0 0 chr17 20585932 20585978 -74686673 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 742 518 86 0 21 chr17 20585978 20586072 -74686579 + (CAGAGA)n Simple_repeat Simple_repeat 4 96 0 1 742 4340 201 65 11 chr17 20586072 20586815 -74685836 + L1_Mur1 LINE L1 3570 4336 -1550 1 742 4921 188 18 30 chr17 20587040 20588082 -74684569 + Lx3C LINE L1 5933 6962 -14 1 742 22 0 0 0 chr17 20588091 20588113 -74684538 + AT_rich Low_complexity Low_complexity 1 22 0 1 742 228 164 115 0 chr17 20588116 20588177 -74684474 + Lx9 LINE L1 7395 7462 -182 1 742 450 0 0 0 chr17 20588185 20588235 -74684416 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 742 1060 101 0 20 chr17 20588834 20588972 -74683679 + B1_Mus1 SINE Alu 1 138 -10 1 742 279 0 0 0 chr17 20588972 20589003 -74683648 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 742 1060 101 0 20 chr17 20589003 20589015 -74683636 + B1_Mus1 SINE Alu 139 148 0 1 742 8585 158 84 19 chr17 20589573 20592060 -74680591 + L1_Mur1 LINE L1 553 3517 -2369 1 742 347 329 41 7 chr17 20592047 20592194 -74680457 - Lx7 LINE L1 -1939 5757 5606 1 742 2146 105 18 6 chr17 20592477 20592804 -74679847 + L1_Mus4 LINE L1 6297 6627 -9 1 742 636 26 0 0 chr17 20593105 20593183 -74679468 + (TG)n Simple_repeat Simple_repeat 2 79 0 1 742 454 274 14 0 chr17 20593304 20593450 -74679201 + Lx9 LINE L1 6912 7059 -585 1 742 220 301 0 13 chr17 20593574 20593799 -74678852 + (TATATG)n Simple_repeat Simple_repeat 1 221 0 1 742 240 298 9 0 chr17 20593735 20593849 -74678802 + (TA)n Simple_repeat Simple_repeat 2 116 0 1 742 22 80 0 0 chr17 20594650 20594700 -74677951 + AT_rich Low_complexity Low_complexity 1 50 0 1 742 5293 191 27 7 chr17 20594790 20595869 -74676782 - L1_Mur2 LINE L1 -273 5604 4504 1 742 1321 107 39 10 chr17 20595868 20596076 -74676575 + Lx2 LINE L1 5628 5841 -1167 1 742 5585 75 13 14 chr17 20596104 20596861 -74675790 - L1Md_F2 LINE L1 -2 6580 5825 1 742 257 83 0 0 chr17 20596861 20596897 -74675754 + RLTR10B LTR ERVK 1 36 -256 1 742 1848 67 6 122 chr17 20596897 20597218 -74675433 + RLTR10B LTR ERVK 9 292 0 1 742 5704 76 0 4 chr17 20597218 20597970 -74674681 - L1_Mm LINE L1 -53 5830 5082 1 742 382 93 0 0 chr17 20597956 20598010 -74674641 + L1_Mm LINE L1 5039 5092 -791 1 742 5931 188 32 3 chr17 20598010 20599147 -74673504 + Lx2 LINE L1 5827 6996 -1 1 742 270 0 0 0 chr17 20600741 20600771 -74671880 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 742 181 57 57 0 chr17 20601258 20601293 -74671358 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1 742 25 31 0 0 chr17 20601334 20601366 -74671285 + AT_rich Low_complexity Low_complexity 1 32 0 1 742 24 32 0 0 chr17 20601382 20601413 -74671238 + AT_rich Low_complexity Low_complexity 1 31 0 1 742 232 169 29 58 chr17 20601972 20602041 -74670610 - Charlie2b DNA MER1_type -1467 1315 1249 1 742 21 100 0 0 chr17 20602075 20602145 -74670506 + AT_rich Low_complexity Low_complexity 1 70 0 1 742 372 219 16 8 chr17 20602356 20602480 -74670171 + (TA)n Simple_repeat Simple_repeat 1 125 0 1 742 23 54 0 0 chr17 20602810 20602847 -74669804 + AT_rich Low_complexity Low_complexity 1 37 0 1 742 718 367 55 23 chr17 20602938 20603267 -74669384 - ORR1C2 LTR MaLR 0 384 38 1 742 306 330 66 33 chr17 20603328 20603510 -74669141 + Lx8 LINE L1 7047 7234 -239 1 742 1852 178 9 0 chr17 20603660 20603975 -74668676 + ORR1A3 LTR MaLR 1 318 -8 1 742 4343 220 98 36 chr17 20603979 20605382 -74667269 + ORR1A3-int LTR MaLR 1 1410 -382 1 742 1066 162 6 0 chr17 20605375 20605554 -74667097 + ORR1A3 LTR MaLR 148 327 0 1 742 229 31 0 0 chr17 20606185 20606217 -74666434 + B1_Mur4 SINE Alu 118 149 -1 1 742 186 118 0 0 chr17 20606218 20606252 -74666399 + (A)n Simple_repeat Simple_repeat 1 34 0 1 742 344 364 98 55 chr17 20606306 20606652 -74665999 + ORR1D2 LTR MaLR 1 361 -9 1 742 2986 83 2 1 chr17 20610052 20610465 -74662186 - Lx2A LINE L1 -1237 5771 5362 1 742 928 305 57 15 chr17 20610471 20610807 -74661844 - ORR1B1 LTR MaLR -43 351 2 1 742 4385 262 70 30 chr17 20610808 20612258 -74660393 - ORR1B1-int LTR MaLR 0 1509 1 1 742 890 271 15 6 chr17 20612258 20612511 -74660140 - ORR1B1 LTR MaLR 0 394 108 1 742 268 204 56 0 chr17 20612524 20612578 -74660073 - ORR1B1 LTR MaLR -328 66 10 1 742 25 0 0 0 chr17 20613416 20613441 -74659210 + AT_rich Low_complexity Low_complexity 1 25 0 1 742 387 0 0 0 chr17 20613790 20613833 -74658818 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 742 24 0 0 0 chr17 20614683 20614707 -74657944 + AT_rich Low_complexity Low_complexity 1 24 0 1 742 32 57 0 0 chr17 20615501 20615554 -74657097 + AT_rich Low_complexity Low_complexity 1 53 0 1 742 221 429 13 25 chr17 20615842 20616000 -74656651 + RSINE1 SINE B4 4 159 -6 1 742 23 0 0 0 chr17 20616532 20616555 -74656096 + AT_rich Low_complexity Low_complexity 1 23 0 1 742 621 105 0 0 chr17 20618818 20618913 -74653738 + (TC)n Simple_repeat Simple_repeat 2 96 0 1 742 3177 164 20 38 chr17 20619348 20619958 -74652693 + MT2B LTR ERVL 3 601 0 1 742 933 245 15 156 chr17 20620027 20620554 -74652097 - MYSERV6-int LTR ERVK -20 8939 8487 1 742 21 71 0 0 chr17 20621764 20621806 -74650845 + AT_rich Low_complexity Low_complexity 1 42 0 1 742 1080 110 0 0 chr17 20621818 20621972 -74650679 + L1_Mus2 LINE L1 5792 5945 -621 1 742 197 196 0 18 chr17 20622953 20623010 -74649641 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 742 21 36 0 0 chr17 20623478 20623506 -74649145 + AT_rich Low_complexity Low_complexity 1 28 0 1 742 435 19 0 0 chr17 20625552 20625604 -74647047 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 742 1055 30 0 0 chr17 20627109 20627243 -74645408 + L1Md_T LINE L1 6446 6579 -3 1 742 229 68 22 22 chr17 20627247 20627292 -74645359 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 1 742 930 180 0 0 chr17 20627379 20627557 -74645094 + GA-rich Low_complexity Low_complexity 1 178 0 1 742 1180 61 0 0 chr17 20627770 20627917 -74644734 + B1_Mm SINE Alu 1 147 0 1 742 225 0 0 0 chr17 20627917 20627942 -74644709 + (A)n Simple_repeat Simple_repeat 1 25 0 1 742 1448 60 0 0 chr17 20628189 20628365 -74644286 + L1_Mm LINE L1 5411 5586 -297 1 742 8433 32 0 0 chr17 20628365 20629359 -74643292 + L1Md_A LINE L1 5587 6580 -2 1 742 14090 189 24 35 chr17 20629418 20631799 -74640852 + Lx2 LINE L1 2693 5030 -856 1 742 4497 72 0 48 chr17 20631799 20632430 -74640221 + L1_Mus2 LINE L1 5966 6566 0 1 742 14090 162 18 28 chr17 20632430 20633747 -74638904 + Lx2 LINE L1 5031 6342 -655 1 742 183 80 0 0 chr17 20634622 20634647 -74638004 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 742 180 125 0 0 chr17 20634654 20634686 -74637965 + (TATATG)n Simple_repeat Simple_repeat 5 36 0 1 742 1054 23 15 0 chr17 20634691 20634824 -74637827 + (TC)n Simple_repeat Simple_repeat 2 136 0 1 742 406 336 39 39 chr17 20636340 20636600 -74636051 - Lx9 LINE L1 -366 7278 7019 1 742 467 237 29 11 chr17 20636661 20636836 -74635815 + (TA)n Simple_repeat Simple_repeat 2 179 0 1 742 247 161 41 25 chr17 20636864 20636985 -74635666 + (TA)n Simple_repeat Simple_repeat 1 123 0 1 742 288 338 0 68 chr17 20640671 20640817 -74631834 + Lx8 LINE L1 7105 7240 -233 1 742 304 376 27 65 chr17 20641297 20641482 -74631169 - ORR1D2 LTR MaLR -189 181 4 1 742 1243 355 49 75 chr17 20641551 20642175 -74630476 - ORR1D2-int LTR MaLR -88 1282 654 1 742 2559 186 25 0 chr17 20642175 20642649 -74630002 + Lx3B LINE L1 6484 6969 -4 1 742 1243 355 49 75 chr17 20642649 20643108 -74629543 - ORR1D2-int LTR MaLR -717 653 227 1 742 1493 20 0 5 chr17 20643112 20643317 -74629334 + (TTC)n Simple_repeat Simple_repeat 1 203 0 1 742 213 39 0 0 chr17 20643317 20643343 -74629308 + (TCC)n Simple_repeat Simple_repeat 3 28 0 1 742 8235 126 3 1 chr17 20643345 20645369 -74627282 - L1_Mus3 LINE L1 0 6638 4608 1 742 6529 102 32 8 chr17 20645374 20646422 -74626229 - L1_Mus2 LINE L1 -2 6564 5492 1 742 1672 135 0 11 chr17 20646420 20646690 -74625961 + L1_Mus2 LINE L1 5231 5497 -386 1 742 19517 135 20 6 chr17 20646688 20649190 -74623461 - L1_Mus2 LINE L1 -1269 4614 2072 1 742 207 0 0 0 chr17 20649190 20649213 -74623438 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 742 19517 127 21 4 chr17 20649213 20650137 -74622514 - L1_Mus2 LINE L1 -3812 2071 1141 1 742 4766 121 13 72 chr17 20650739 20651592 -74621059 + RLTR13B4 LTR ERVK 1 803 0 1 742 330 26 0 0 chr17 20651637 20651676 -74620975 + (TATAG)n Simple_repeat Simple_repeat 4 42 0 1 742 1962 199 91 21 chr17 20653376 20653848 -74618803 + RLTR16 LTR ERVK 1 505 0 1 742 312 91 0 0 chr17 20653999 20654043 -74618608 + (TCC)n Simple_repeat Simple_repeat 2 45 0 1 742 809 234 90 26 chr17 20654633 20654866 -74617785 - RLTR22_Mur LTR ERVK 0 1848 1601 1 742 1584 147 7 30 chr17 20654903 20655198 -74617453 - RLTR22_Mur LTR ERVK -1131 717 430 1 742 6218 110 21 15 chr17 20655198 20656158 -74616493 + L1_Mus3 LINE L1 5665 6630 -8 1 742 792 43 0 0 chr17 20656192 20656284 -74616367 + L1Md_F2 LINE L1 5495 5586 -297 1 742 8138 41 2 3 chr17 20656284 20657280 -74615371 + L1Md_F2 LINE L1 5587 6581 -1 1 742 285 158 35 0 chr17 20657300 20657357 -74615294 + MERVK26-int LTR ERVK 6710 6768 -151 1 742 555 259 0 0 chr17 20657358 20657524 -74615127 + CT-rich Low_complexity Low_complexity 3 168 0 1 742 685 245 19 0 chr17 20657526 20657681 -74614970 + MERVK26-int LTR ERVK 6758 6915 -4 1 742 1653 293 118 24 chr17 20657686 20658161 -74614490 + RLTR26 LTR ERVK 1 522 -120 1 742 552 68 0 0 chr17 20658161 20658234 -74614417 + (CAG)n Simple_repeat Simple_repeat 1 73 0 1 742 1653 293 118 24 chr17 20658234 20658345 -74614306 + RLTR26 LTR ERVK 523 641 -1 1 742 954 218 77 5 chr17 20658345 20658566 -74614085 - RLTR15 LTR ERVK -95 264 28 1 742 5480 246 55 18 chr17 20658582 20659821 -74612830 - L1_Mur3 LINE L1 -2516 3361 2064 1 742 192 97 0 0 chr17 20659821 20659852 -74612799 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 742 5480 269 53 28 chr17 20659852 20661010 -74611641 - L1_Mur3 LINE L1 -3814 2063 895 1 742 270 0 0 0 chr17 20661113 20661143 -74611508 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 1 742 5815 57 7 0 chr17 20661637 20662375 -74610276 + L1Md_F2 LINE L1 5840 6582 0 1 742 216 0 49 49 chr17 20662383 20662424 -74610227 + (CAAAA)n Simple_repeat Simple_repeat 5 45 0 1 742 25 0 0 0 chr17 20662487 20662512 -74610139 + AT_rich Low_complexity Low_complexity 1 25 0 1 742 1041 32 0 0 chr17 20663212 20663337 -74609314 + (CA)n Simple_repeat Simple_repeat 2 126 0 1 742 21 0 0 0 chr17 20663590 20663611 -74609040 + AT_rich Low_complexity Low_complexity 1 21 0 1 742 263 397 13 19 chr17 20664514 20664668 -74607983 + RMER15 LTR ERVL 297 449 -126 1 742 7188 84 4 2 chr17 20664905 20666092 -74606559 - L1Md_F2 LINE L1 -12 6570 5381 1 742 3426 47 28 5 chr17 20666092 20666518 -74606133 - RLTR10C LTR ERVK 0 436 1 1 742 7346 51 4 53 chr17 20666518 20667512 -74605139 - MMERVK10C-int LTR ERVK 0 7581 6637 1 742 18745 53 0 0 chr17 20667493 20669994 -74602657 - MMERVK10C-int LTR ERVK -1771 5810 3512 1 742 366 44 0 0 chr17 20669997 20670042 -74602609 - MMERVK10C-int LTR ERVK -6405 137 93 1 742 342 167 38 45 chr17 20670042 20670174 -74602477 + CT-rich Low_complexity Low_complexity 4 134 0 1 742 1410 57 31 42 chr17 20670215 20670406 -74602245 - MMERVK10C-int LTR ERVK -7314 267 1 2 742 3242 59 28 28 chr17 20670406 20670842 -74601809 - RLTR10C LTR ERVK 0 436 1 2 742 23047 95 4 3 chr17 20670842 20674125 -74598526 - L1Md_F2 LINE L1 -497 5386 2101 1 742 477 0 0 0 chr17 20674517 20674570 -74598081 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 742 726 297 30 24 chr17 20674699 20675037 -74597614 + Lx9 LINE L1 6920 7259 -385 2 742 6489 148 52 2 chr17 20675110 20676222 -74596429 - Lx2 LINE L1 -4 6993 5826 2 742 351 78 0 0 chr17 20679562 20679613 -74593038 + (CATA)n Simple_repeat Simple_repeat 2 52 0 2 742 513 0 0 0 chr17 20679811 20679868 -74592783 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 2 742 208 139 0 0 chr17 20680099 20680135 -74592516 + (T)n Simple_repeat Simple_repeat 1 36 0 2 742 183 42 0 0 chr17 20680135 20680159 -74592492 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 2 742 21 0 0 0 chr17 20680631 20680652 -74591999 + AT_rich Low_complexity Low_complexity 1 21 0 2 742 218 32 0 31 chr17 20681128 20681160 -74591491 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2 742 22 0 0 0 chr17 20681230 20681252 -74591399 + AT_rich Low_complexity Low_complexity 1 22 0 2 742 35 54 0 0 chr17 20681930 20681986 -74590665 + AT_rich Low_complexity Low_complexity 1 56 0 2 742 295 306 9 9 chr17 20682177 20682289 -74590362 + (TA)n Simple_repeat Simple_repeat 1 112 0 2 742 2445 77 0 12 chr17 20682485 20682829 -74589822 - L1_Mus2 LINE L1 0 6566 6227 2 742 30 27 0 0 chr17 20682836 20682873 -74589778 + AT_rich Low_complexity Low_complexity 1 37 0 2 742 748 42 0 0 chr17 20682888 20682984 -74589667 - B2_Mm2 SINE B2 -98 97 2 2 742 23 33 0 0 chr17 20683216 20683246 -74589405 + AT_rich Low_complexity Low_complexity 1 30 0 2 742 312 313 153 37 chr17 20683264 20683453 -74589198 - ORR1C1 LTR MaLR 0 378 168 2 742 254 352 29 0 chr17 20683682 20683787 -74588864 + Lx8 LINE L1 7127 7234 -239 2 742 1400 128 188 7 chr17 20683874 20684166 -74588485 + IAPLTR4 LTR ERVK 1 345 0 2 742 675 205 0 0 chr17 20684233 20684355 -74588296 + ORR1A3 LTR MaLR 1 122 -205 2 742 5584 202 39 53 chr17 20684358 20685431 -74587220 + ORR1A3-int LTR MaLR 325 1441 -522 2 742 2774 19 0 0 chr17 20685431 20685753 -74586898 + RLTRETN_Mm LTR ERVK 1 322 0 2 742 5584 192 42 28 chr17 20685753 20686262 -74586389 + ORR1A3-int LTR MaLR 1442 1963 0 2 742 1786 180 9 3 chr17 20686262 20686586 -74586065 + ORR1A3 LTR MaLR 1 326 0 2 742 4238 85 3 12 chr17 20687397 20687995 -74584656 + L1_Mus3 LINE L1 6046 6638 0 2 742 402 173 98 18 chr17 20688006 20688118 -74584533 + Lx8 LINE L1 7353 7473 0 2 742 3377 39 0 0 chr17 20688241 20688650 -74584001 + L1Md_A LINE L1 6173 6581 -1 2 742 204 67 0 0 chr17 20688888 20688918 -74583733 + (TTTC)n Simple_repeat Simple_repeat 2 31 0 2 742 298 403 32 78 chr17 20689104 20689451 -74583200 + ORR1D2 LTR MaLR 32 362 -8 2 742 285 29 0 0 chr17 20691708 20691742 -74580909 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 2 742 964 170 4 55 chr17 20692276 20692512 -74580139 - Lx LINE L1 0 6654 6431 2 742 5624 180 9 75 chr17 20692523 20693835 -74578816 + L1_Mm LINE L1 3865 5089 -794 2 742 29 28 0 0 chr17 20693875 20693911 -74578740 + AT_rich Low_complexity Low_complexity 1 36 0 2 742 1219 296 37 11 chr17 20694672 20695051 -74577600 - ORR1B1 LTR MaLR 0 394 6 2 742 4123 274 65 30 chr17 20695056 20695339 -74577312 - ORR1B1-int LTR MaLR 0 1509 1218 2 742 384 22 0 0 chr17 20695339 20695384 -74577267 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 2 742 4123 274 65 30 chr17 20695384 20696558 -74576093 - ORR1B1-int LTR MaLR -292 1217 2 2 742 876 292 83 15 chr17 20696558 20696895 -74575756 - ORR1B1 LTR MaLR 0 394 35 2 742 2144 101 25 6 chr17 20697011 20697331 -74575320 - L1_Mus3 LINE L1 0 6638 6313 2 742 25 0 0 0 chr17 20697701 20697726 -74574925 + AT_rich Low_complexity Low_complexity 1 25 0 2 742 181 91 0 64 chr17 20698523 20698570 -74574081 + A-rich Low_complexity Low_complexity 5 48 0 2 742 621 250 15 22 chr17 20698700 20698835 -74573816 + ETnERV2-int LTR ERVK 7069 7202 -204 2 742 24 53 0 0 chr17 20699958 20699996 -74572655 + AT_rich Low_complexity Low_complexity 1 38 0 2 742 234 0 0 0 chr17 20701765 20701791 -74570860 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 742 465 88 12 12 chr17 20702173 20702254 -74570397 + L1Md_F2 LINE L1 6492 6572 -10 2 742 212 79 0 50 chr17 20702260 20702300 -74570351 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 2 742 201 189 57 0 chr17 20702643 20702696 -74569955 + A-rich Low_complexity Low_complexity 1 56 0 2 742 563 265 6 24 chr17 20703013 20703179 -74569472 - MYSERV-int LTR ERVK -3 6547 6385 2 742 21 0 0 0 chr17 20703188 20703209 -74569442 + AT_rich Low_complexity Low_complexity 1 21 0 2 742 525 277 68 49 chr17 20703468 20703715 -74568936 - Lx7 LINE L1 -1689 5784 5501 2 742 269 333 67 42 chr17 20703939 20704351 -74568300 - L1M2 LINE L1 -869 5271 4853 2 742 320 333 33 16 chr17 20705720 20705842 -74566809 + RMER15 LTR ERVL 341 464 -111 2 742 482 344 71 57 chr17 20705848 20706199 -74566452 + MTE-int LTR MaLR 579 934 -646 2 742 546 16 0 0 chr17 20708369 20708432 -74564219 + (GA)n Simple_repeat Simple_repeat 2 64 0 2 742 214 200 0 0 chr17 20708474 20708514 -74564137 + (TA)n Simple_repeat Simple_repeat 1 40 0 2 742 316 303 0 10 chr17 20708938 20709038 -74563613 + (CATATA)n Simple_repeat Simple_repeat 1 99 0 2 92 683 316 34 43 chr17 20709155 20709506 -74563145 + Lx9 LINE L1 6912 7259 -385 2 743 235 324 7 0 chr17 20709506 20709645 -74563006 + (TA)n Simple_repeat Simple_repeat 2 141 0 2 743 292 222 19 0 chr17 20712876 20712984 -74559667 + (CATATA)n Simple_repeat Simple_repeat 2 111 0 2 743 260 237 33 25 chr17 20715516 20715637 -74557014 + ORR1A3-int LTR MaLR 632 753 -756 2 743 892 86 7 67 chr17 20715538 20715688 -74556963 + B1_Mus1 SINE Alu 8 148 0 2 743 492 18 0 0 chr17 20715688 20715745 -74556906 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 743 4948 181 8 26 chr17 20715745 20716693 -74555958 + ORR1A3-int LTR MaLR 1033 1963 0 2 743 1792 151 43 3 chr17 20716698 20717003 -74555648 + ORR1A3 LTR MaLR 10 326 0 2 743 402 397 20 54 chr17 20718352 20718701 -74553950 + ORR1D2 LTR MaLR 26 362 -8 2 743 1753 42 0 0 chr17 20722009 20722226 -74550425 - L1Md_T LINE L1 0 6582 6366 2 743 917 297 61 13 chr17 20722227 20722537 -74550114 - ORR1B1 LTR MaLR -64 330 6 2 743 3003 313 28 67 chr17 20722549 20723960 -74548691 - ORR1B1-int LTR MaLR -15 1355 1 2 743 1160 264 65 12 chr17 20723970 20724331 -74548320 - ORR1B1 LTR MaLR -11 383 6 2 743 204 40 0 0 chr17 20724727 20724752 -74547899 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 743 28 0 0 0 chr17 20724917 20724945 -74547706 + AT_rich Low_complexity Low_complexity 1 28 0 2 743 21 36 0 0 chr17 20725019 20725047 -74547604 + AT_rich Low_complexity Low_complexity 1 28 0 2 743 516 72 0 0 chr17 20725148 20725217 -74547434 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 2 743 288 120 0 0 chr17 20725539 20725589 -74547062 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 743 244 247 128 11 chr17 20725608 20725702 -74546949 + Lx9 LINE L1 7353 7457 -187 2 743 23 0 0 0 chr17 20726383 20726406 -74546245 + AT_rich Low_complexity Low_complexity 1 23 0 2 743 257 0 30 0 chr17 20726864 20726897 -74545754 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 743 698 196 108 115 chr17 20728077 20728365 -74544286 + L1_Mur1 LINE L1 82 367 -6617 2 743 18125 101 31 3 chr17 20728414 20731609 -74541042 + L1_Mur1 LINE L1 676 3974 -1912 2 743 3465 107 69 0 chr17 20731609 20732134 -74540517 + Lx3_Mus LINE L1 6449 7009 0 2 743 192 127 47 16 chr17 20734000 20734064 -74538587 + A-rich Low_complexity Low_complexity 6 71 0 2 743 338 169 0 0 chr17 20734628 20734687 -74537964 - RLTR19-int LTR ERVK -2480 3657 3599 2 743 541 141 100 10 chr17 20735417 20735517 -74537134 + RMER12 LTR ERVK 479 587 -735 2 743 2241 213 103 12 chr17 20735798 20736360 -74536291 + RMER12 LTR ERVK 4 616 -706 2 743 18027 123 104 22 chr17 20736360 20738683 -74533968 + L1_Mus2 LINE L1 2332 4882 -1684 2 743 229 133 0 82 chr17 20738683 20738732 -74533919 - RMER20A LTR ERVK -286 230 186 2 743 18027 123 104 22 chr17 20738732 20740264 -74532387 + L1_Mus2 LINE L1 4883 6566 0 2 743 1450 226 178 52 chr17 20740267 20740785 -74531866 + RMER12 LTR ERVK 599 1181 -141 2 743 595 309 30 0 chr17 20740947 20741115 -74531536 + RMER12 LTR ERVK 1142 1314 -8 2 743 507 240 95 85 chr17 20741187 20741387 -74531264 - RMER4A LTR ERVK -27 439 238 2 743 332 343 48 68 chr17 20741388 20741638 -74531013 - MYSERV-int LTR ERVK -1462 5088 4844 2 743 4445 157 42 3 chr17 20741755 20742520 -74530131 + Lx2 LINE L1 5871 6665 -332 2 743 276 140 70 0 chr17 20742524 20742581 -74530070 + Lx2 LINE L1 6918 6978 -19 2 743 1614 192 35 3 chr17 20742578 20742891 -74529760 + L1_Mur2 LINE L1 5284 5606 -271 2 743 3047 53 32 41 chr17 20742893 20743305 -74529346 + MERVK26-int LTR ERVK 3896 4303 -2616 2 743 252 332 55 60 chr17 20743496 20743896 -74528755 - MMTV-int LTR ERVK -4700 2553 2156 2 743 8248 215 14 34 chr17 20744151 20746007 -74526644 + MURVY-int LTR ERV1 5634 7452 0 2 743 764 221 52 80 chr17 20746165 20746416 -74526235 + RLTR5_Mm LTR ERV1 385 628 0 2 743 4193 161 57 3 chr17 20746984 20747860 -74524791 + L1_Mur2 LINE L1 2310 3232 -2645 2 743 1448 166 72 7 chr17 20747860 20748152 -74524499 + RLTR22_Mur LTR ERVK 1 311 -1537 2 743 1767 202 35 62 chr17 20748844 20749298 -74523353 + RLTR31A_Mm LTR ERVK 40 481 -103 2 743 298 68 0 0 chr17 20749297 20749341 -74523310 + RLTR22_Mur LTR ERVK 762 805 -1043 2 743 532 89 44 0 chr17 20749424 20749514 -74523137 + (TTCC)n Simple_repeat Simple_repeat 3 96 0 2 743 1058 106 111 5 chr17 20749524 20749713 -74522938 - Lx2 LINE L1 -14 6983 6775 2 743 3099 108 50 22 chr17 20749713 20750214 -74522437 - Lx2 LINE L1 -354 6643 6129 2 743 429 325 73 59 chr17 20750303 20750522 -74522129 + RMER12 LTR ERVK 1101 1322 0 2 743 7632 169 25 24 chr17 20750522 20752119 -74520532 + L1_Mur2 LINE L1 3227 4824 -1053 2 743 7668 204 31 10 chr17 20752114 20753309 -74519342 - MusHAL1 LINE L1 -688 2024 793 2 743 519 31 0 0 chr17 20753309 20753374 -74519277 + (TG)n Simple_repeat Simple_repeat 2 66 0 2 743 7668 204 31 10 chr17 20753374 20753998 -74518653 - MusHAL1 LINE L1 -1920 792 167 2 743 706 158 96 0 chr17 20754000 20754146 -74518505 - Lx2 LINE L1 -1 6996 6837 2 743 1889 213 20 80 chr17 20754147 20754681 -74517970 - RLTR31A_Mm LTR ERVK 0 561 3 2 743 4343 159 20 28 chr17 20754682 20754961 -74517690 - Lx2 LINE L1 -172 6825 6560 2 743 378 0 0 0 chr17 20754961 20755003 -74517648 + (TAA)n Simple_repeat Simple_repeat 3 44 0 2 743 4343 159 20 28 chr17 20755003 20755532 -74517119 - Lx2 LINE L1 -438 6559 6024 2 743 429 236 0 0 chr17 20755529 20755649 -74517002 - L1_Mur1 LINE L1 -4487 1390 1271 2 743 1106 251 87 54 chr17 20755655 20756025 -74516626 - ORR1C2 LTR MaLR -2 382 1 2 743 559 375 44 11 chr17 20756046 20756321 -74516330 - MTD LTR MaLR -122 297 14 2 743 666 370 70 37 chr17 20756556 20757257 -74515394 - Lx8 LINE L1 -455 7018 6295 3 743 237 65 0 0 chr17 20757265 20757296 -74515355 + (TTAA)n Simple_repeat Simple_repeat 1 31 0 3 743 3213 204 43 6 chr17 20757297 20757928 -74514723 - Lx4B LINE L1 -12 7046 6393 3 743 2526 163 12 33 chr17 20757965 20758453 -74514198 - Lx4B LINE L1 -991 6067 5590 3 743 238 275 29 14 chr17 20758694 20758764 -74513887 - MTE-int LTR MaLR -1457 123 53 3 743 3740 193 37 27 chr17 20759205 20760052 -74512599 + RLTR13A LTR ERVK 1 855 0 3 743 347 395 6 17 chr17 20762635 20762810 -74509841 - B4 SINE B4 -24 268 96 3 743 1139 68 0 14 chr17 20763774 20763922 -74508729 + B1_Mm SINE Alu 2 147 0 3 743 285 51 0 0 chr17 20763964 20764003 -74508648 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 743 2059 74 0 34 chr17 20764004 20764299 -74508352 + L1_Mus1 LINE L1 6282 6566 -1 3 743 6196 67 91 97 chr17 20764711 20765222 -74507429 + L1Md_Gf LINE L1 63 621 -5901 3 743 228 316 59 59 chr17 20765222 20765323 -74507328 + RLTR45 LTR ERVK 4 104 -378 3 743 6196 67 91 97 chr17 20765323 20765797 -74506854 + L1Md_Gf LINE L1 622 1142 -5380 3 743 35199 42 1 2 chr17 20765763 20770153 -74502498 + L1Md_T LINE L1 1203 5586 -297 3 743 8349 34 1 0 chr17 20770153 20771147 -74501504 + L1Md_T LINE L1 5587 6581 -1 3 743 3105 92 5 9 chr17 20771484 20771922 -74500729 - L1_Mus3 LINE L1 -6 6632 6197 3 743 22 35 0 0 chr17 20772021 20772050 -74500601 + AT_rich Low_complexity Low_complexity 1 29 0 3 743 39 22 0 0 chr17 20772592 20772638 -74500013 + AT_rich Low_complexity Low_complexity 1 46 0 3 743 273 344 120 0 chr17 20772638 20772763 -74499888 + B1_Mur1 SINE Alu 5 144 -5 3 743 32 81 0 0 chr17 20772868 20772942 -74499709 + AT_rich Low_complexity Low_complexity 1 74 0 3 743 485 300 42 14 chr17 20773196 20773338 -74499313 + B1_Mur2 SINE Alu 3 148 -1 3 743 1768 63 0 0 chr17 20773430 20773651 -74499000 - L1_Mus3 LINE L1 -268 6370 6150 3 743 1419 103 9 4 chr17 20773651 20773876 -74498775 + L1_Mus3 LINE L1 6411 6636 -2 3 743 304 340 40 69 chr17 20773877 20774051 -74498600 + B3A SINE B2 28 196 -2 3 743 230 0 0 32 chr17 20774600 20774631 -74498020 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 743 303 341 170 0 chr17 20774727 20774909 -74497742 + MTD LTR MaLR 35 247 -172 3 743 357 330 98 8 chr17 20775164 20775399 -74497252 + Lx9 LINE L1 7242 7497 -147 3 743 336 48 0 0 chr17 20775511 20775553 -74497098 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 3 743 35495 34 0 0 chr17 20775981 20781591 -74491060 + L1Md_T LINE L1 1 5589 -297 3 743 8979 5 0 0 chr17 20781591 20782587 -74490064 + L1Md_T LINE L1 5590 6585 0 3 743 384 22 0 0 chr17 20782607 20782652 -74489999 + (A)n Simple_repeat Simple_repeat 1 45 0 3 743 363 388 55 41 chr17 20783198 20783416 -74489235 + ID_B1 SINE B4 1 221 -3 3 743 434 304 33 95 chr17 20783623 20783834 -74488817 - B3A SINE B2 0 198 1 3 743 395 309 39 8 chr17 20783872 20783999 -74488652 + B3A SINE B2 6 136 -62 3 743 189 0 0 0 chr17 20784027 20784048 -74488603 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 743 236 191 0 45 chr17 20784056 20784144 -74488507 + GA-rich Low_complexity Low_complexity 3 86 0 3 743 753 22 0 0 chr17 20784188 20784279 -74488372 + (TG)n Simple_repeat Simple_repeat 2 92 0 3 743 198 103 0 0 chr17 20784454 20784483 -74488168 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 743 660 13 0 0 chr17 20784483 20784559 -74488092 + (GA)n Simple_repeat Simple_repeat 2 78 0 3 743 441 36 0 0 chr17 20784687 20784742 -74487909 + (TG)n Simple_repeat Simple_repeat 1 55 0 3 743 612 81 0 0 chr17 20785514 20785601 -74487050 + (TG)n Simple_repeat Simple_repeat 2 88 0 3 743 1176 78 0 24 chr17 20786448 20786618 -74486033 - L1_Mus1 LINE L1 -2 6565 6400 3 743 1321 215 50 2 chr17 20786656 20786995 -74485656 - L1_Mur3 LINE L1 -3828 2055 1705 3 743 3298 261 53 12 chr17 20786995 20787926 -74484725 + Lx2B LINE L1 5980 6878 -122 3 743 19052 174 44 16 chr17 20788868 20790211 -74482440 - Lx4A LINE L1 -3 7055 5671 3 743 2685 132 0 2 chr17 20790211 20790627 -74482024 + Lx LINE L1 6239 6653 -1 3 743 19052 171 76 31 chr17 20790627 20790684 -74481967 - Lx4A LINE L1 -207 5670 5610 3 743 229 218 197 60 chr17 20790684 20790801 -74481850 - MLT-int LTR MaLR -161 1574 1442 3 743 19052 171 76 31 chr17 20790801 20793178 -74479473 - Lx4A LINE L1 -207 5609 3054 3 743 1013 136 0 11 chr17 20793178 20793356 -74479295 + (TCC)n Simple_repeat Simple_repeat 3 178 0 3 743 19052 171 76 31 chr17 20793356 20794285 -74478366 - Lx4A LINE L1 -2824 3053 2061 3 743 524 15 0 15 chr17 20794285 20794351 -74478300 + (TGG)n Simple_repeat Simple_repeat 1 65 0 3 743 19052 171 76 31 chr17 20794351 20794970 -74477681 - Lx4A LINE L1 -3817 2060 1376 3 743 761 273 50 45 chr17 20794970 20795327 -74477324 - RLTR10D LTR ERVK 0 359 1 3 743 1556 200 22 34 chr17 20795327 20795684 -74476967 - IAP-d-int LTR ERVK 0 6542 6190 3 743 731 231 6 0 chr17 20795679 20795848 -74476803 - IAP-d-int LTR ERVK -459 6083 5914 3 743 946 217 0 0 chr17 20795870 20796054 -74476597 - IAP-d-int LTR ERVK -742 5800 5617 3 743 461 183 9 9 chr17 20796067 20796172 -74476479 - L1_Mur2 LINE L1 -2538 3339 3235 3 743 442 317 98 28 chr17 20796461 20796675 -74475976 - RMER15 LTR ERVL -11 564 336 3 743 264 279 12 60 chr17 20797122 20797370 -74475281 - RMER17D LTR ERVK -416 473 238 3 743 304 284 92 78 chr17 20798184 20798402 -74474249 - RLTR15 LTR ERVK -32 327 107 3 743 530 268 17 19 chr17 20799047 20800193 -74472458 + MMSAT4 Satellite Satellite 1 1143 -5 3 743 219 333 0 16 chr17 20800632 20800693 -74471958 + ID4_ SINE ID 5 64 -19 3 743 28 0 0 0 chr17 20801086 20801114 -74471537 + AT_rich Low_complexity Low_complexity 1 28 0 3 743 2244 129 22 0 chr17 20801451 20801807 -74470844 + Lx3_Mus LINE L1 6646 7009 0 3 743 414 0 0 0 chr17 20801850 20801896 -74470755 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 3 743 1224 101 0 0 chr17 20801898 20802076 -74470575 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 3 743 235 293 69 0 chr17 20802239 20802355 -74470296 - L1M LINE L1 -797 5382 5259 3 743 209 279 0 0 chr17 20802629 20802697 -74469954 + (TTA)n Simple_repeat Simple_repeat 1 68 0 3 743 184 172 11 44 chr17 20802798 20802889 -74469762 + A-rich Low_complexity Low_complexity 4 91 0 3 743 1116 98 0 0 chr17 20803269 20803513 -74469138 + (GAA)n Simple_repeat Simple_repeat 1 244 0 3 743 1081 314 58 55 chr17 20803528 20804134 -74468517 - Lx7 LINE L1 -397 7299 6692 3 743 324 0 0 0 chr17 20804252 20804288 -74468363 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 743 298 347 25 10 chr17 20804290 20804488 -74468163 - Lx7 LINE L1 -1533 6163 5963 3 743 427 219 155 8 chr17 20804555 20804684 -74467967 - Lx5 LINE L1 0 7050 6903 3 743 3958 119 0 2 chr17 20804687 20805291 -74467360 + L1_Mm LINE L1 1930 2532 -3351 3 743 4671 158 40 70 chr17 20805292 20806525 -74466126 - L1_Mur2 LINE L1 -4304 1573 379 3 743 1029 239 120 13 chr17 20806541 20806850 -74465801 - Lx7 LINE L1 -138 5742 5401 3 743 3061 86 7 2 chr17 20807080 20807501 -74465150 - L1_Mus2 LINE L1 0 6566 6144 3 743 2931 71 14 2 chr17 20807501 20807983 -74464668 + L1_Mus2 LINE L1 5431 5931 -635 3 743 207 0 0 0 chr17 20808203 20808226 -74464425 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 743 4348 186 43 36 chr17 20809509 20810359 -74462292 + RMER13A LTR ERVK 5 860 0 3 743 686 97 0 88 chr17 20810963 20811076 -74461575 - RMER6C LTR ERVK -525 165 63 3 743 3011 215 16 44 chr17 20811865 20812619 -74460032 + L1VL4 LINE L1 167 899 -5403 3 743 3429 153 124 54 chr17 20812619 20813373 -74459278 + RLTR13C2 LTR ERVK 1 1018 -5 3 743 1134 151 5 0 chr17 20813385 20813597 -74459054 + MusHAL1 LINE L1 46 258 -2454 3 743 11723 177 18 8 chr17 20813595 20816954 -74455697 + Lx2 LINE L1 3597 6997 0 3 743 3128 77 5 2 chr17 20817464 20817881 -74454770 - BGLII LTR ERVK 0 421 4 3 743 218 194 14 29 chr17 20817946 20818015 -74454636 + (TATAA)n Simple_repeat Simple_repeat 3 70 0 3 743 232 268 0 35 chr17 20818789 20818847 -74453804 + Lx8 LINE L1 7184 7239 -234 3 743 216 0 0 0 chr17 20820893 20820917 -74451734 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 3 743 2278 188 65 2 chr17 20820917 20821366 -74451285 - Lx4A LINE L1 -5 7053 6577 3 743 479 301 61 25 chr17 20821722 20821920 -74450731 - Lx9 LINE L1 -427 7217 7013 3 743 22 0 0 0 chr17 20822340 20822362 -74450289 + AT_rich Low_complexity Low_complexity 1 22 0 3 743 1085 153 0 22 chr17 20822644 20822825 -74449826 - Lx2A LINE L1 -648 6360 6184 3 743 1037 273 25 56 chr17 20823552 20823909 -74448742 - Lx2B LINE L1 -3 6997 6652 3 743 4788 178 42 15 chr17 20826216 20827924 -74444727 + Lx3C LINE L1 5124 6963 -13 3 743 239 243 13 79 chr17 20829095 20829149 -74443502 - ORR1D1 LTR MaLR -6 368 318 3 743 2299 179 83 24 chr17 20829149 20829652 -74442999 + RMER16 LTR ERVK 1 533 0 3 743 239 243 13 79 chr17 20829652 20829673 -74442978 - ORR1D1 LTR MaLR -57 317 298 3 743 1076 110 0 0 chr17 20830040 20830186 -74442465 - B1_Mus2 SINE Alu 0 147 2 3 743 832 331 56 54 chr17 20830189 20830706 -74441945 - ORR1D1-int LTR MaLR -119 1251 734 3 743 7588 178 36 13 chr17 20830722 20830810 -74441841 + Lx2 LINE L1 5516 5603 -1394 3 743 3206 71 133 0 chr17 20830810 20831262 -74441389 + RLTR1B LTR ERV1 1 512 0 3 743 7588 137 76 8 chr17 20831262 20832559 -74440092 + Lx2 LINE L1 5604 6991 -6 3 743 328 286 37 19 chr17 20832662 20832769 -74439882 - ORR1D1-int LTR MaLR -728 642 534 3 743 889 325 50 7 chr17 20832801 20833083 -74439568 - Lx5 LINE L1 -3 7047 6754 3 743 2552 236 63 24 chr17 20833100 20833209 -74439442 - Lx5 LINE L1 -199 6851 6738 3 743 3211 156 65 12 chr17 20833209 20833780 -74438871 - MT2B LTR ERVL 0 601 1 3 743 2552 263 75 20 chr17 20833780 20834580 -74438071 - Lx5 LINE L1 -232 6744 5874 3 743 7435 194 74 26 chr17 20834588 20836914 -74435737 - Lx5 LINE L1 -138 5742 3040 3 743 1083 134 0 0 chr17 20836914 20837093 -74435558 + (TTC)n Simple_repeat Simple_repeat 2 180 0 3 743 6648 214 189 38 chr17 20837093 20837349 -74435302 - Lx5 LINE L1 -2841 3039 2770 3 743 5703 144 49 5 chr17 20837384 20839110 -74433541 - L1_Mus4 LINE L1 -2 6634 4838 3 743 4207 26 4 12 chr17 20839110 20839607 -74433044 + MT2_Mm LTR ERVL 1 493 0 3 743 1257 25 18 0 chr17 20839607 20839770 -74432881 + MERVL-int LTR ERVL 1 166 -5319 3 92 40600 17 2 0 chr17 20839752 20844525 -74428126 + MERVL-int LTR ERVL 579 5360 -125 3 744 390 167 46 35 chr17 20844525 20844612 -74428039 + ORR1A3-int LTR MaLR 553 640 -1323 3 744 302 0 0 0 chr17 20844612 20844650 -74428001 + MERVL-int LTR ERVL 5448 5485 0 3 744 4289 24 0 12 chr17 20844650 20845149 -74427502 + MT2_Mm LTR ERVL 1 493 0 3 744 246 174 0 0 chr17 20845149 20845195 -74427456 - L1_Mus4 LINE L1 -1041 4842 4797 3 744 1062 236 4 0 chr17 20845192 20845455 -74427196 - Lx5 LINE L1 -3411 2466 2203 3 744 11097 113 12 16 chr17 20845461 20845931 -74426720 - MusHAL1 LINE L1 -622 2090 1617 3 744 4400 12 4 0 chr17 20845931 20846422 -74426229 + MT2_Mm LTR ERVL 1 493 0 3 744 11097 113 12 16 chr17 20846422 20847887 -74424764 - MusHAL1 LINE L1 -1096 1616 163 3 744 694 137 8 53 chr17 20848459 20848590 -74424061 - RMER6B LTR ERVK -299 162 38 3 744 1946 139 11 11 chr17 20848591 20848939 -74423712 - L1_Mur1 LINE L1 -1091 4795 4448 3 744 354 138 0 0 chr17 20848939 20848997 -74423654 + (T)n Simple_repeat Simple_repeat 1 58 0 3 744 7552 52 2 0 chr17 20848999 20849981 -74422670 - L1Md_F3 LINE L1 -14 6570 5587 4 744 35706 71 25 13 chr17 20850005 20856297 -74416354 - L1Md_T LINE L1 0 6585 220 4 744 4104 108 0 3 chr17 20856298 20856955 -74415696 - L1_Mur1 LINE L1 -1423 4463 3809 4 744 6719 117 24 29 chr17 20856953 20858810 -74413841 + Lx3_Mus LINE L1 4787 6577 -5 4 744 5351 103 5 1 chr17 20858810 20859568 -74413083 + Lx3_Mus LINE L1 6249 7009 0 4 744 572 84 53 0 chr17 20859587 20859682 -74412969 + Lx3A LINE L1 6502 6601 -380 4 744 618 156 7 49 chr17 20859690 20859832 -74412819 + Lx3A LINE L1 6840 6975 -6 4 744 24 0 0 0 chr17 20859833 20859857 -74412794 + AT_rich Low_complexity Low_complexity 1 24 0 4 744 1077 286 38 47 chr17 20859985 20860455 -74412196 + Lx9 LINE L1 6721 7186 -458 4 744 1397 218 183 63 chr17 20861638 20862254 -74410397 - RMER6C LTR ERVK 0 690 1 4 744 452 96 8 3 chr17 20862653 20862735 -74409916 - L1_Mus2 LINE L1 -18 5865 5782 4 744 368 91 0 15 chr17 20862844 20862911 -74409740 - L1Md_T LINE L1 -1 6581 6516 4 744 1341 36 0 0 chr17 20862915 20863081 -74409570 - L1_Mus2 LINE L1 -772 5794 5629 4 744 5628 61 6 1 chr17 20863081 20863799 -74408852 + L1_Mus2 LINE L1 5845 6565 -1 4 744 212 125 16 82 chr17 20863802 20863863 -74408788 + A-rich Low_complexity Low_complexity 2 58 0 4 744 279 387 28 7 chr17 20868034 20868177 -74404474 - B4 SINE B4 -29 263 118 4 744 218 239 11 0 chr17 20868460 20868552 -74404099 + (TA)n Simple_repeat Simple_repeat 1 93 0 4 744 21 0 0 0 chr17 20868702 20868723 -74403928 + AT_rich Low_complexity Low_complexity 1 21 0 4 744 23 54 0 0 chr17 20869278 20869315 -74403336 + AT_rich Low_complexity Low_complexity 1 37 0 4 744 2945 78 24 2 chr17 20870025 20870436 -74402215 - BGLII LTR ERVK 0 421 2 4 744 298 169 25 25 chr17 20871376 20871455 -74401196 + (CATATA)n Simple_repeat Simple_repeat 6 84 0 4 744 23 54 0 0 chr17 20873095 20873132 -74399519 + AT_rich Low_complexity Low_complexity 1 37 0 4 744 2856 182 91 2 chr17 20873132 20873975 -74398676 - Lx4A LINE L1 -2 7056 6139 4 744 3009 182 6 14 chr17 20873974 20874814 -74397837 + Lx4A LINE L1 5305 6149 -909 4 744 2786 38 0 6 chr17 20875570 20875910 -74396741 + L1Md_F3 LINE L1 6235 6572 -12 4 744 294 325 55 102 chr17 20876007 20876134 -74396517 + B1_Mm SINE Alu 21 141 -6 4 744 1178 235 0 45 chr17 20876363 20876737 -74395914 + MYSERV16_I-int LTR ERVK 1 357 -1969 4 744 333 234 0 0 chr17 20878684 20878776 -74393875 + MERVL_2A-int LTR ERVL 3874 4007 -1754 4 744 990 149 6 6 chr17 20879835 20880017 -74392634 + L1_Mus4 LINE L1 6448 6629 -7 4 744 867 156 52 0 chr17 20881963 20882136 -74390515 + L1_Mur2 LINE L1 2535 2716 -3161 4 744 24 32 0 0 chr17 20882642 20882673 -74389978 + AT_rich Low_complexity Low_complexity 1 31 0 4 744 216 0 0 0 chr17 20882761 20882785 -74389866 + (T)n Simple_repeat Simple_repeat 1 24 0 4 744 2482 199 104 5 chr17 20882811 20883376 -74389275 - L1_Mur1 LINE L1 -6361 621 1 4 744 1039 195 103 13 chr17 20883804 20884028 -74388623 - RMER13A LTR ERVK -26 834 591 4 744 255 238 200 38 chr17 20884042 20884147 -74388504 + RLTR6_Mm LTR ERV1 1 122 -532 4 744 2079 112 258 27 chr17 20884149 20884598 -74388053 + RLTR6_Mm LTR ERV1 37 589 -65 4 744 39193 33 16 1 chr17 20884613 20892169 -74380482 + RLTR6-int LTR ERV1 1 7778 0 4 744 259 228 200 38 chr17 20892169 20892274 -74380377 + RLTR6_Mm LTR ERV1 1 122 -532 4 744 2000 124 260 27 chr17 20892276 20892722 -74379929 + RLTR6_Mm LTR ERV1 37 586 -68 4 744 2320 214 97 24 chr17 20892720 20892888 -74379763 - RMER13A LTR ERVK -285 575 390 4 744 553 67 0 22 chr17 20892888 20892979 -74379672 + L1_Mus2 LINE L1 6478 6566 0 4 744 2320 214 97 24 chr17 20892979 20893346 -74379305 - RMER13A LTR ERVK -471 389 1 4 744 276 379 7 29 chr17 20893873 20894009 -74378642 - ORR1E LTR MaLR -219 140 8 4 744 1090 133 0 0 chr17 20894608 20894803 -74377848 - MusHAL1 LINE L1 -744 1968 1774 4 744 5813 122 4 10 chr17 20894797 20895788 -74376863 - L1_Mm LINE L1 -3262 2621 1637 4 744 28702 111 17 5 chr17 20895786 20901632 -74371019 - L1_Mus2 LINE L1 0 6566 646 4 744 367 157 0 14 chr17 20901606 20901677 -74370974 - L1_Mus2 LINE L1 -6326 290 221 4 744 6911 119 3 4 chr17 20901681 20902883 -74369768 - L1VL1 LINE L1 -2498 1200 1 4 744 317 333 41 14 chr17 20902904 20903050 -74369601 + MER77 LTR ERVL 446 595 -12 4 744 1217 277 77 26 chr17 20903873 20904262 -74368389 + Lx5 LINE L1 6637 7045 -5 4 744 364 355 52 61 chr17 20905533 20905746 -74366905 + B4 SINE B4 8 218 -74 4 744 8537 186 104 21 chr17 20905805 20906666 -74365985 - L1_Mur2 LINE L1 -364 5513 4638 4 744 459 0 0 0 chr17 20906666 20906717 -74365934 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 4 744 8537 215 64 101 chr17 20906717 20910396 -74362255 - L1_Mur2 LINE L1 -1240 4643 1414 4 744 2923 156 4 25 chr17 20910508 20911029 -74361622 - Lx2 LINE L1 0 6997 6488 4 744 1239 281 43 84 chr17 20911360 20911960 -74360691 - RMER19C LTR ERVK 0 902 119 4 744 3584 78 9 0 chr17 20911965 20912429 -74360222 - L1_Mus2 LINE L1 -1 6565 6098 4 744 368 275 114 42 chr17 20912431 20912598 -74360053 - RMER19C LTR ERVK -432 179 1 4 744 186 43 0 0 chr17 20912900 20912923 -74359728 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 744 282 116 0 0 chr17 20916165 20916208 -74356443 + (TAA)n Simple_repeat Simple_repeat 1 43 0 4 744 1342 204 15 3 chr17 20916227 20916567 -74356084 + Lx4B LINE L1 1278 1621 -4256 4 744 12522 190 32 19 chr17 20916565 20919825 -74352826 + Lx4B LINE L1 3031 6329 -729 4 744 333 0 0 0 chr17 20919825 20919862 -74352789 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 744 5092 220 70 17 chr17 20919862 20920525 -74352126 + Lx4B LINE L1 6330 7050 -8 4 744 406 236 53 53 chr17 20921024 20921270 -74351381 - Lx9 LINE L1 -2 7642 7397 4 744 756 294 20 0 chr17 20921268 20921523 -74351128 + Lx9 LINE L1 7019 7278 -366 4 744 406 331 28 21 chr17 20921548 20921690 -74350961 + B4 SINE B4 123 265 -27 4 744 409 269 8 0 chr17 20923396 20923515 -74349136 + Lx4B LINE L1 6935 7054 -4 4 744 25 0 0 0 chr17 20923515 20923540 -74349111 + AT_rich Low_complexity Low_complexity 1 25 0 4 744 6010 161 24 21 chr17 20924552 20925727 -74346924 - Lx2 LINE L1 -233 6764 5587 4 744 3051 184 35 23 chr17 20925733 20926960 -74345691 - L1VL4 LINE L1 -2159 1400 158 4 744 925 171 0 0 chr17 20927040 20927215 -74345436 - Lx2 LINE L1 -433 5444 5270 4 744 3062 128 83 2 chr17 20927223 20927726 -74344925 + Lx2 LINE L1 6454 6997 0 4 744 1664 95 16 0 chr17 20927822 20928065 -74344586 - Lx3_Mus LINE L1 -430 6579 6333 4 744 2848 95 2 9 chr17 20928065 20928491 -74344160 + Lx3_Mus LINE L1 6567 6989 -20 4 744 188 34 0 33 chr17 20928491 20928521 -74344130 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 4 744 2279 95 0 9 chr17 20928527 20928868 -74343783 - L1_Mm LINE L1 -786 5097 4760 4 744 384 55 0 0 chr17 20928868 20928923 -74343728 + L1_Mus1 LINE L1 6513 6567 0 4 744 180 0 0 0 chr17 20928931 20928951 -74343700 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 4 744 261 0 0 0 chr17 20928967 20928996 -74343655 + (GA)n Simple_repeat Simple_repeat 2 30 0 4 744 2013 112 16 0 chr17 20929413 20929736 -74342915 - L1_Mm LINE L1 -3562 2321 1994 4 744 5490 68 1 35 chr17 20929738 20930487 -74342164 + L1_Mus1 LINE L1 5843 6566 -1 4 744 3673 117 109 0 chr17 20931888 20932578 -74340073 - L1_Mur1 LINE L1 -1715 4171 3407 4 744 7219 134 43 6 chr17 20932576 20933827 -74338824 + Lx3A LINE L1 5678 6974 -7 4 744 21947 157 8 24 chr17 20933919 20934660 -74337991 + L1Md_F LINE L1 675 1359 -4524 4 744 4647 72 5 7 chr17 20934660 20935272 -74337379 + L1Md_F2 LINE L1 5958 6568 -14 4 744 21947 116 17 83 chr17 20935272 20939440 -74333211 + L1Md_F LINE L1 1360 5298 -585 4 744 19926 43 2 1 chr17 20939438 20942613 -74330038 + L1_Mus1 LINE L1 3391 6566 -1 4 744 3976 220 40 20 chr17 20942641 20943844 -74328807 + Lx2B LINE L1 5362 6603 -447 4 744 3328 155 22 14 chr17 20943818 20944296 -74328355 + Lx2B LINE L1 4133 4620 -1257 4 744 2728 59 15 0 chr17 20944296 20944637 -74328014 + ORR1A1 LTR MaLR 1 346 0 4 744 3328 155 22 14 chr17 20944637 20944781 -74327870 + Lx2B LINE L1 4621 4760 -1117 4 744 757 204 62 31 chr17 20944786 20944948 -74327703 - RLTR13D4 LTR ERVK 0 1033 867 4 744 2881 108 7 32 chr17 20944945 20945386 -74327265 - RLTR13C2 LTR ERVK -378 430 1 4 744 5436 191 8 34 chr17 20945394 20945647 -74327004 + Lx2B LINE L1 4777 5032 -854 4 744 685 97 257 0 chr17 20945647 20945760 -74326891 + B1_Mus1 SINE Alu 1 142 -6 4 744 5436 191 8 34 chr17 20945760 20945869 -74326782 + Lx2B LINE L1 5033 5119 -767 4 744 1498 67 0 5 chr17 20945869 20946063 -74326588 + B2_Mm2 SINE B2 1 193 -2 4 744 5436 213 76 20 chr17 20946063 20947798 -74324853 + Lx2B LINE L1 5120 7000 0 4 744 343 358 42 36 chr17 20949237 20949405 -74323246 - B4 SINE B4 -27 265 97 4 744 678 300 36 4 chr17 20949407 20949655 -74322996 - Lx9 LINE L1 -370 7274 7019 4 744 389 217 36 24 chr17 20949769 20949934 -74322717 + Lx9 LINE L1 7476 7642 -2 4 744 262 302 0 0 chr17 20951295 20951358 -74321293 - PB1 SINE Alu -8 119 57 4 744 21 57 0 0 chr17 20952457 20952492 -74320159 + AT_rich Low_complexity Low_complexity 1 35 0 4 744 5559 22 0 8 chr17 20952620 20953269 -74319382 - L1Md_F2 LINE L1 0 6582 5939 4 744 998 75 189 0 chr17 20953390 20953549 -74319102 + RLTR22_Mus LTR ERVK 1 189 -1619 4 744 3941 120 23 37 chr17 20953547 20954194 -74318457 + RLTR22_Mus LTR ERVK 1171 1808 0 4 744 1337 126 23 6 chr17 20954268 20954491 -74318160 - L1_Mm LINE L1 -324 5559 5294 4 744 6367 179 24 3 chr17 20954516 20956524 -74316127 - Lx LINE L1 -5 6649 4586 4 744 3979 116 2 0 chr17 20956527 20957140 -74315511 - MusHAL1 LINE L1 -519 2193 1580 4 744 8049 53 5 0 chr17 20957150 20958190 -74314461 + MTA_Mm-int LTR MaLR 54 1098 0 4 744 3156 51 8 0 chr17 20958190 20958583 -74314068 + MTA_Mm LTR MaLR 1 396 0 4 744 6172 126 16 14 chr17 20959125 20960079 -74312572 - RMER17B LTR ERVK -2 956 1 4 744 777 210 112 32 chr17 20960545 20960796 -74311855 - Lx LINE L1 -6746 982 712 4 744 2670 217 137 40 chr17 20960782 20961873 -74310778 + L1_Mur3 LINE L1 1273 2468 -3412 4 744 1243 172 22 89 chr17 20961873 20962057 -74310594 + RMER17C LTR ERVK 22 188 -222 4 744 1363 39 0 22 chr17 20962057 20962241 -74310410 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 4 744 1243 172 22 89 chr17 20962241 20962407 -74310244 + RMER17C LTR ERVK 189 347 -63 4 744 647 222 33 163 chr17 20962407 20962767 -74309884 + RLTRETN_Mm LTR ERVK 1 402 -7 4 744 301 244 0 35 chr17 20962751 20962836 -74309815 + RMER17C LTR ERVK 321 402 -8 4 744 2383 272 176 18 chr17 20962842 20964431 -74308220 + L1_Mur3 LINE L1 2454 4293 -1584 4 744 3544 229 136 31 chr17 20964963 20966217 -74306434 + L1_Mur3 LINE L1 4292 5677 -203 4 744 225 303 105 16 chr17 20966439 20966563 -74306088 + MER77 LTR ERVL 470 604 -3 4 744 24 32 0 0 chr17 20968629 20968660 -74303991 + AT_rich Low_complexity Low_complexity 1 31 0 4 11 30888 88 14 4 chr17 20968905 20973890 -74298761 + L1Md_F2 LINE L1 596 5586 -297 4 745 8158 41 3 4 chr17 20973890 20974887 -74297764 + L1Md_F2 LINE L1 5587 6582 0 4 745 3930 96 16 13 chr17 20974914 20975549 -74297102 + MusHAL1 LINE L1 206 842 -1870 4 745 7046 110 20 10 chr17 20975548 20976786 -74295865 + L1_Mus4 LINE L1 5390 6634 -2 4 745 312 390 9 58 chr17 20978527 20978750 -74293901 - B4 SINE B4 -1 291 80 4 745 26 30 0 0 chr17 20979018 20979051 -74293600 + AT_rich Low_complexity Low_complexity 1 33 0 5 745 26 0 0 0 chr17 20979115 20979141 -74293510 + AT_rich Low_complexity Low_complexity 1 26 0 5 745 26 0 0 0 chr17 20979486 20979512 -74293139 + AT_rich Low_complexity Low_complexity 1 26 0 5 745 530 354 5 58 chr17 20979607 20980028 -74292623 - Lx6 LINE L1 -99 7361 6588 5 745 423 346 25 41 chr17 20980042 20980238 -74292413 - Lx6 LINE L1 -598 6452 6260 5 745 222 289 26 13 chr17 20980243 20980320 -74292331 - B4 SINE B4 -206 86 9 5 745 952 222 142 8 chr17 20981178 20981446 -74291205 - Lx5 LINE L1 -4 7046 6743 5 745 1011 116 47 0 chr17 20981849 20982021 -74290630 - Lx LINE L1 -6 6648 6469 5 745 3737 128 16 0 chr17 20982025 20982593 -74290058 + Lx LINE L1 5832 6408 -246 5 745 24 0 0 0 chr17 20983276 20983300 -74289351 + AT_rich Low_complexity Low_complexity 1 24 0 5 745 701 119 62 20 chr17 20986188 20986334 -74286317 - RMER17B LTR ERVK -495 463 312 5 745 415 286 19 7 chr17 20986354 20986509 -74286142 + L1M3 LINE L1 5437 5593 -596 5 745 238 264 33 11 chr17 20986515 20986607 -74286044 + Lx7 LINE L1 5690 5783 -1913 5 745 1138 300 26 17 chr17 20986772 20987121 -74285530 + MTD LTR MaLR 40 391 -28 5 745 335 305 0 0 chr17 20987167 20987249 -74285402 + MTD-int LTR MaLR 30 111 -1147 5 745 7745 158 28 22 chr17 20987577 20989518 -74283133 + L1_Mur1 LINE L1 710 2670 -3216 5 745 5312 153 25 6 chr17 20989506 20989794 -74282857 - L1_Mur1 LINE L1 -1547 4339 4046 5 745 2158 80 0 35 chr17 20989794 20990107 -74282544 - L1Md_F2 LINE L1 -2 6580 6279 5 745 5312 153 25 6 chr17 20990107 20990797 -74281854 - L1_Mur1 LINE L1 -1841 4045 3344 5 745 919 144 12 0 chr17 20990808 20990975 -74281676 + CT-rich Low_complexity Low_complexity 3 171 0 5 745 471 35 0 0 chr17 20990966 20991023 -74281628 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 745 3297 188 26 20 chr17 20991026 20991761 -74280890 - MusHAL1 LINE L1 -578 2134 1396 5 745 564 192 5 157 chr17 20991789 20991849 -74280802 - L1_Mur2 LINE L1 -502 5375 5319 5 745 965 128 0 7 chr17 20991849 20991991 -74280660 + B1_Mus1 SINE Alu 2 142 -6 5 745 564 192 5 157 chr17 20991991 20992134 -74280517 - L1_Mur1 LINE L1 -559 5318 5203 5 745 414 156 0 0 chr17 20992133 20992210 -74280441 + L1_Mur1 LINE L1 5384 5460 -426 5 745 2995 189 53 45 chr17 20992220 20992862 -74279789 + Lx2B LINE L1 6337 6983 -17 5 745 322 209 0 0 chr17 20993083 20993150 -74279501 - RLTR12B LTR ERVK -458 70 4 5 745 1094 267 68 42 chr17 20993163 20993817 -74278834 - Lx7 LINE L1 -1574 6122 5459 5 745 352 175 0 0 chr17 20994893 20994950 -74277701 - HAL1-3A_ME LINE L1 -826 2032 1976 5 745 641 109 0 35 chr17 20994951 20995065 -74277586 + (TATATG)n Simple_repeat Simple_repeat 1 110 0 5 745 4181 148 20 21 chr17 20995124 20995840 -74276811 - Lx3B LINE L1 -4 6969 6255 5 745 324 205 81 59 chr17 20995848 20995993 -74276658 - RLTR13D3 LTR ERVK -60 1054 972 5 745 25668 29 1 0 chr17 20996272 21000000 -74272651 - L1Md_T LINE L1 -2 6580 2851 5 745 12906 51 0 0 chr17 21000000 21001681 -74270970 - L1Md_F LINE L1 -3033 2850 1170 1 745 4832 155 6 121 chr17 21001687 21002856 -74269795 - L1Md_F LINE L1 -5411 1205 171 1 745 5931 130 13 12 chr17 21003360 21004404 -74268247 - Lx3B LINE L1 -711 6262 5206 2 745 3330 124 26 171 chr17 21004404 21005282 -74267369 + RMER17A LTR ERVK 1 751 0 3 745 5931 133 27 18 chr17 21005282 21005635 -74267016 - Lx3B LINE L1 -681 5205 4862 2 745 777 273 5 36 chr17 21006114 21006357 -74266294 + RMER13B LTR ERVK 641 908 0 4 745 313 298 15 117 chr17 21006768 21006905 -74265746 + ORR1D2 LTR MaLR 19 141 -229 5 745 180 158 0 0 chr17 21007476 21007514 -74265137 + (GTTTG)n Simple_repeat Simple_repeat 2 39 0 6 745 3070 107 45 37 chr17 21007665 21008180 -74264471 - MURVY-LTR LTR ERV1 0 519 1 7 745 1637 277 52 35 chr17 21008265 21008728 -74263923 + RMER19C LTR ERVK 141 611 0 8 745 185 65 32 0 chr17 21008764 21008795 -74263856 + (TA)n Simple_repeat Simple_repeat 1 32 0 9 745 8680 195 31 31 chr17 21010674 21011812 -74260839 + L1_Mur2 LINE L1 919 2054 -3823 1 745 336 48 0 0 chr17 21011812 21011854 -74260797 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 745 8680 193 28 30 chr17 21011854 21013138 -74259513 + L1_Mur2 LINE L1 2055 3332 -2545 1 745 7793 188 14 27 chr17 21013411 21014071 -74258580 + L1VL4 LINE L1 443 1089 -2526 1 745 1158 75 0 0 chr17 21014071 21014218 -74258433 + B1_Mm SINE Alu 1 147 0 1 745 7793 179 22 23 chr17 21014218 21015759 -74256892 + L1VL4 LINE L1 1090 2628 -987 1 745 328 155 0 17 chr17 21015760 21015819 -74256832 - ORR1A1-int LTR MaLR -458 1334 1277 1 745 2386 185 21 15 chr17 21015821 21016288 -74256363 + L1_Mur2 LINE L1 5351 5820 -57 1 745 773 282 67 19 chr17 21016306 21016575 -74256076 + L1_Mus2 LINE L1 238 706 -5932 1 745 28292 137 14 19 chr17 21016580 21022547 -74250104 + L1_Mus2 LINE L1 352 6303 -263 1 745 10807 111 5 6 chr17 21022547 21024938 -74247713 + L1_Mus2 LINE L1 4178 6566 0 1 745 3245 240 48 17 chr17 21024944 21025821 -74246830 + Lx5 LINE L1 5846 6749 -301 1 745 1860 60 0 8 chr17 21027976 21028212 -74244439 - L1_Mus1 LINE L1 -331 6236 6003 1 745 1074 64 0 0 chr17 21028212 21028353 -74244298 + L1_Mus1 LINE L1 6427 6567 0 1 745 581 288 93 47 chr17 21028415 21028866 -74243785 + L1_Rod LINE L1 5156 5627 -220 2 745 255 154 0 0 chr17 21028883 21028922 -74243729 + Lx9 LINE L1 7161 7199 -445 2 745 842 255 108 32 chr17 21029145 21029514 -74243137 + Lx9 LINE L1 7212 7608 -36 2 745 722 238 46 111 chr17 21030588 21030957 -74241694 + L1_Mur3 LINE L1 4167 4511 -1369 2 745 4477 127 13 0 chr17 21031255 21032025 -74240626 + Lx2 LINE L1 5487 6268 -729 2 745 878 127 4 0 chr17 21032032 21032188 -74240463 - Lx2 LINE L1 -168 5715 5556 2 745 2643 139 47 0 chr17 21032181 21032605 -74240046 + Lx2 LINE L1 6267 6710 -287 2 745 2496 278 45 75 chr17 21032596 21033333 -74239318 + Lx7 LINE L1 6603 7341 -355 2 745 480 18 0 0 chr17 21033333 21033390 -74239261 + (TG)n Simple_repeat Simple_repeat 1 57 0 2 745 2496 278 45 75 chr17 21033390 21033535 -74239116 + Lx7 LINE L1 7342 7458 -238 2 745 1346 0 34 11 chr17 21033535 21033711 -74238940 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 2 745 2496 278 45 75 chr17 21033711 21033954 -74238697 + Lx7 LINE L1 7459 7696 0 2 745 257 287 0 100 chr17 21034349 21034405 -74238246 + RMER15 LTR ERVL 352 400 -175 2 745 714 317 77 31 chr17 21034405 21034757 -74237894 + ORR1D2 LTR MaLR 1 368 -2 2 745 257 287 0 100 chr17 21034757 21034820 -74237831 + RMER15 LTR ERVL 401 459 -116 2 745 405 0 0 0 chr17 21034882 21034927 -74237724 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 745 617 294 55 29 chr17 21035764 21036037 -74236614 - Lx9 LINE L1 -127 7517 7238 3 745 404 330 47 26 chr17 21036135 21036325 -74236326 + B4A SINE B4 28 221 -71 3 745 3273 41 5 0 chr17 21037183 21037577 -74235074 - MTA_Mm LTR MaLR 0 396 1 3 745 334 323 24 8 chr17 21037954 21038079 -74234572 - MER77 LTR ERVL -18 589 463 3 745 2670 94 5 20 chr17 21038706 21039108 -74233543 + L1_Mus3 LINE L1 6242 6637 -1 3 745 234 0 0 0 chr17 21039861 21039887 -74232764 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 745 589 225 8 48 chr17 21039887 21040013 -74232638 - B1_Mur4 SINE Alu -11 139 19 3 745 1120 68 0 14 chr17 21040074 21040222 -74232429 - B1_Mm SINE Alu 0 147 2 3 745 207 256 12 12 chr17 21040610 21040693 -74231958 + (CA)n Simple_repeat Simple_repeat 2 84 0 3 745 27 0 0 0 chr17 21040770 21040797 -74231854 + AT_rich Low_complexity Low_complexity 1 27 0 4 745 6085 153 10 4 chr17 21043667 21044756 -74227895 + Lx3C LINE L1 3708 4803 -1074 4 745 5872 153 34 15 chr17 21045219 21045696 -74226955 + Lx3C LINE L1 4808 5304 -582 4 745 1054 197 141 49 chr17 21045696 21046000 -74226651 - IAPEY3_LTR LTR ERVK 0 332 1 4 745 6589 170 45 23 chr17 21046000 21047636 -74225015 + Lx3C LINE L1 5305 6963 -13 4 745 657 0 0 0 chr17 21047636 21047709 -74224942 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 4 745 1648 226 29 82 chr17 21047885 21048371 -74224280 - Lx2B LINE L1 0 7000 6541 4 745 38 0 0 0 chr17 21048531 21048569 -74224082 + AT_rich Low_complexity Low_complexity 1 38 0 4 745 266 348 36 42 chr17 21048714 21048879 -74223772 - Lx8 LINE L1 -224 7249 7086 4 745 594 128 0 0 chr17 21048880 21048974 -74223677 + (TA)n Simple_repeat Simple_repeat 2 95 0 4 745 5263 113 10 4 chr17 21049145 21049926 -74222725 + Lx3A LINE L1 6184 6969 -12 4 745 477 0 0 0 chr17 21049929 21049982 -74222669 + (TAAA)n Simple_repeat Simple_repeat 1 53 0 4 745 3037 220 111 5 chr17 21052484 21053540 -74219111 + Lx4B LINE L1 5856 7053 -5 5 745 444 178 96 26 chr17 21054470 21054626 -74218025 - Lx9 LINE L1 0 7644 7478 5 745 332 159 125 45 chr17 21054660 21054772 -74217879 - Lx9 LINE L1 -127 7517 7397 5 745 358 307 14 28 chr17 21054760 21054901 -74217750 + Lx9 LINE L1 7013 7151 -493 5 745 1170 75 0 0 chr17 21054906 21055053 -74217598 + B1_Mus2 SINE Alu 1 147 0 5 745 225 94 0 0 chr17 21055055 21055087 -74217564 + (GAA)n Simple_repeat Simple_repeat 2 33 0 5 745 360 287 132 0 chr17 21055087 21055223 -74217428 + Lx9 LINE L1 7121 7274 -370 5 745 249 326 32 0 chr17 21055243 21055338 -74217313 + B4 SINE B4 118 215 -77 5 745 1133 148 44 0 chr17 21056355 21056538 -74216113 + Lx2B LINE L1 6806 6996 -4 5 745 323 369 51 21 chr17 21057756 21058257 -74214394 - Lx7 LINE L1 -209 7264 6732 5 745 643 268 6 6 chr17 21058284 21058442 -74214209 + RMER15 LTR ERVL 362 519 -56 5 745 2269 207 31 62 chr17 21060963 21061514 -74211137 + Lx5 LINE L1 6516 7049 -1 6 745 2948 175 23 2 chr17 21061532 21062058 -74210593 + L1_Mur2 LINE L1 5100 5636 -241 6 745 1597 210 38 3 chr17 21062064 21062380 -74210271 + Lx5 LINE L1 6428 6754 -296 6 745 241 163 0 0 chr17 21062344 21062387 -74210264 - L1MD3 LINE L1 -1312 6683 6641 6 745 304 191 0 0 chr17 21062427 21062490 -74210161 + L1MA5 LINE L1 6197 6259 -41 6 745 723 313 49 0 chr17 21064429 21064672 -74207979 - Lx9 LINE L1 -366 7278 7024 6 745 537 180 31 211 chr17 21064655 21064851 -74207800 + Lx9 LINE L1 7382 7516 -128 6 745 333 0 0 0 chr17 21064851 21064888 -74207763 + (TC)n Simple_repeat Simple_repeat 2 38 0 6 745 243 0 0 0 chr17 21064888 21064914 -74207737 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 745 537 180 31 211 chr17 21064914 21065033 -74207618 + Lx9 LINE L1 7517 7640 -4 6 745 471 78 0 0 chr17 21065467 21065531 -74207120 + (TTTA)n Simple_repeat Simple_repeat 3 66 0 6 745 300 91 0 0 chr17 21065586 21065630 -74207021 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 7 745 3086 185 49 85 chr17 21065631 21066346 -74206305 - Lx4B LINE L1 -8 7050 6362 7 745 707 241 5 70 chr17 21066362 21066549 -74206102 + Lx4B LINE L1 6176 6350 -708 7 745 597 133 0 0 chr17 21067419 21067517 -74205134 + (T)n Simple_repeat Simple_repeat 1 98 0 7 745 1293 54 0 0 chr17 21067521 21067668 -74204983 - B1_Mm SINE Alu 0 147 1 7 745 24 32 0 0 chr17 21067958 21067989 -74204662 + AT_rich Low_complexity Low_complexity 1 31 0 7 745 5194 144 129 16 chr17 21068258 21069227 -74203424 + Lx4A LINE L1 5649 6726 -332 7 745 3671 172 19 32 chr17 21069224 21070241 -74202410 - Lx4B LINE L1 -769 6289 5269 7 745 712 182 7 14 chr17 21070248 21070387 -74202264 + Lx4B LINE L1 5117 5254 -623 7 745 342 0 0 0 chr17 21070513 21070551 -74202100 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 7 745 776 353 18 23 chr17 21071598 21071987 -74200664 - Lx8 LINE L1 -674 6799 6413 7 745 517 321 82 37 chr17 21072005 21072383 -74200268 + Lx8 LINE L1 7079 7473 0 7 745 5378 40 2 0 chr17 21072431 21073035 -74199616 - L1Md_T LINE L1 0 6582 5978 7 745 356 130 26 0 chr17 21073310 21073387 -74199264 + (CAGA)n Simple_repeat Simple_repeat 2 80 0 8 745 247 35 0 0 chr17 21073693 21073722 -74198929 - U6 snRNA snRNA -78 29 1 8 745 468 0 0 0 chr17 21073969 21074021 -74198630 + (TG)n Simple_repeat Simple_repeat 2 53 0 8 745 251 211 0 0 chr17 21074779 21074817 -74197834 - tRNA-Ile-ATA tRNA tRNA -39 38 1 8 745 4830 155 12 0 chr17 21074820 21075655 -74196996 + Lx2 LINE L1 5513 6363 -634 8 745 528 16 0 0 chr17 21075739 21075800 -74196851 + (TTATA)n Simple_repeat Simple_repeat 5 65 0 8 745 937 269 86 19 chr17 21075839 21076108 -74196543 - B4A SINE B4 -4 288 2 8 745 789 264 66 77 chr17 21076973 21077260 -74195391 - RMER15 LTR ERVL -36 539 256 8 745 251 214 25 114 chr17 21077336 21077415 -74195236 - RMER15 LTR ERVL -500 75 4 8 745 1615 234 45 26 chr17 21077824 21078205 -74194446 - Lx7 LINE L1 -502 7194 6807 8 745 360 0 0 0 chr17 21078292 21078332 -74194319 + (CAAAA)n Simple_repeat Simple_repeat 3 42 0 8 745 344 270 123 62 chr17 21078397 21078543 -74194108 - ID_B1 SINE B4 -15 209 55 9 745 256 157 19 19 chr17 21078536 21078588 -74194063 + MTC LTR MaLR 6 57 -364 9 745 2916 211 10 10 chr17 21078785 21079387 -74193264 + Lx2B LINE L1 6200 6801 -199 9 745 362 224 46 9 chr17 21079392 21079500 -74193151 + Lx4B LINE L1 6947 7058 0 9 745 4597 49 8 0 chr17 21079926 21080455 -74192196 - L1Md_F2 LINE L1 0 6582 6050 9 745 393 331 36 14 chr17 21081230 21081368 -74191283 - B1_Mur1 SINE Alu -8 141 1 9 745 213 39 0 0 chr17 21081475 21081501 -74191150 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 9 745 275 298 0 12 chr17 21081542 21081627 -74191024 + G-rich Low_complexity Low_complexity 3 86 0 9 745 182 293 173 20 chr17 21083307 21083457 -74189194 + MIRc SINE MIR 90 262 -6 9 745 185 192 132 19 chr17 21083643 21083696 -74188955 + MIR SINE MIR 95 153 -109 9 745 322 180 237 43 chr17 21083789 21083882 -74188769 + PB1D10 SINE Alu 1 111 -6 1 745 185 250 67 0 chr17 21084046 21084106 -74188545 - L2a LINE L2 -77 3349 3286 1 745 312 27 0 0 chr17 21084344 21084381 -74188270 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 745 389 300 69 8 chr17 21084405 21084536 -74188115 + MER20 DNA MER1_type 24 162 -57 1 745 395 224 86 24 chr17 21084634 21084752 -74187899 - MLT1C LTR MaLR -21 484 355 1 745 267 305 12 12 chr17 21085309 21085392 -74187259 + MER58A DNA MER1_type 5 87 -137 1 745 323 299 86 53 chr17 21085403 21085555 -74187096 + MER58A DNA MER1_type 56 212 -12 1 745 202 29 0 54 chr17 21085635 21085672 -74186979 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 1 745 407 327 0 0 chr17 21085861 21085974 -74186677 - PB1D10 SINE Alu -2 115 3 1 745 197 235 130 56 chr17 21086372 21086480 -74186171 + MIR SINE MIR 108 223 -39 1 745 867 303 93 11 chr17 21086487 21086882 -74185769 - MLT1C LTR MaLR -16 451 43 1 745 518 279 162 66 chr17 21086928 21087200 -74185451 - MER21B LTR ERV1 -21 842 545 1 745 422 280 26 61 chr17 21087698 21087812 -74184839 - B1F1 SINE Alu -39 110 1 1 745 515 211 0 68 chr17 21087884 21088001 -74184650 - ID_B1 SINE B4 -2 222 114 1 745 231 383 0 0 chr17 21088833 21088927 -74183724 - MIR SINE MIR -71 191 98 1 745 228 330 77 26 chr17 21088986 21089154 -74183497 + MIR SINE MIR 1 185 -91 1 745 626 109 10 0 chr17 21090280 21090381 -74182270 + (GA)n Simple_repeat Simple_repeat 1 102 0 1 745 1085 118 101 0 chr17 21090582 21090751 -74181900 - B2_Mm2 SINE B2 -9 186 1 1 745 299 268 135 45 chr17 21090786 21090919 -74181732 - MLT1B LTR MaLR -5 385 241 1 745 381 22 0 0 chr17 21092265 21092311 -74180340 + (CATAC)n Simple_repeat Simple_repeat 3 48 0 1 745 262 268 58 11 chr17 21094431 21094442 -74178209 - ID_B1 SINE B4 -128 96 6 1 745 265 320 13 13 chr17 21094442 21094518 -74178133 - ID4 SINE ID -2 81 6 1 745 1145 146 17 0 chr17 21094631 21094809 -74177842 + B2_Mm2 SINE B2 1 181 -14 1 745 785 84 9 0 chr17 21099839 21099946 -74172705 + B1_Mus2 SINE Alu 40 147 0 1 745 345 275 80 80 chr17 21101067 21101229 -74171422 + B3A SINE B2 1 162 -33 1 745 255 31 0 0 chr17 21101241 21101273 -74171378 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 745 227 261 89 82 chr17 21101352 21101498 -74171153 + B1F1 SINE Alu 2 148 -1 1 745 243 0 0 0 chr17 21102120 21102147 -74170504 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 746 657 37 0 0 chr17 21103446 21103527 -74169124 + B1_Mm SINE Alu 40 120 -27 1 746 4579 152 45 24 chr17 21103533 21104355 -74168296 - RLTR25A LTR ERVK -264 839 1 1 746 295 128 183 16 chr17 21105882 21105963 -74166688 + PB1D9 SINE Alu 24 115 -5 1 746 972 200 82 21 chr17 21107032 21107226 -74165425 - B3 SINE B2 -10 206 1 1 746 564 211 0 44 chr17 21107761 21107875 -74164776 + PB1D9 SINE Alu 2 110 -10 1 746 21 0 0 0 chr17 21107952 21107973 -74164678 + AT_rich Low_complexity Low_complexity 1 21 0 1 746 450 0 0 0 chr17 21108396 21108446 -74164205 + (A)n Simple_repeat Simple_repeat 1 50 0 1 746 277 252 19 28 chr17 21108509 21108615 -74164036 + GA-rich Low_complexity Low_complexity 3 107 0 1 746 7839 11 4 0 chr17 21108914 21109733 -74162918 - RLTR13B2 LTR ERVK 0 822 1 1 746 5860 107 46 11 chr17 21109763 21110615 -74162036 - Lx3A LINE L1 -1 6980 6099 1 746 189 0 0 0 chr17 21110869 21110890 -74161761 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 746 492 18 0 0 chr17 21110971 21111028 -74161623 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 746 1775 298 52 7 chr17 21111049 21111610 -74161041 + Lx8 LINE L1 6209 6794 -679 1 746 3413 97 2 2 chr17 21111610 21112055 -74160596 + L1_Mus1 LINE L1 6122 6566 -1 1 746 298 122 0 0 chr17 21112062 21112111 -74160540 + L1_Mm LINE L1 5642 5690 -193 1 746 7341 169 32 4 chr17 21112109 21113811 -74158840 + Lx2 LINE L1 5245 6997 0 1 746 2023 75 19 0 chr17 21114724 21115012 -74157639 - L1_Mus2 LINE L1 -492 6074 5776 1 746 2918 71 5 36 chr17 21115026 21115437 -74157214 - L1_Mus2 LINE L1 -6 6560 6163 1 746 2836 22 0 0 chr17 21115437 21115759 -74156892 - RLTRETN_Mm LTR ERVK 0 322 1 1 746 38242 34 5 10 chr17 21115759 21120629 -74152022 - MMETn-int LTR ERVK 0 4844 1 1 746 2836 22 0 0 chr17 21120629 21120951 -74151700 - RLTRETN_Mm LTR ERVK 0 322 1 1 746 2426 77 0 0 chr17 21120952 21121288 -74151363 - L1_Mus2 LINE L1 -399 6167 5832 1 746 4329 19 0 0 chr17 21121288 21121770 -74150881 + LTRIS_Mm LTR ERV1 1 482 0 1 746 34051 31 16 12 chr17 21121770 21126289 -74146362 + MuRRS-int LTR ERV1 1 4690 0 1 746 4367 12 0 0 chr17 21126289 21126771 -74145880 + LTRIS_Mm LTR ERV1 1 482 0 1 746 6995 100 1 0 chr17 21126775 21127792 -74144859 - L1_Mus2 LINE L1 -52 5831 4814 1 746 907 56 8 0 chr17 21127832 21127957 -74144694 + L1_Mus2 LINE L1 6439 6564 -2 1 746 22 35 0 0 chr17 21128474 21128503 -74144148 + AT_rich Low_complexity Low_complexity 1 29 0 1 746 22 0 0 0 chr17 21128611 21128633 -74144018 + AT_rich Low_complexity Low_complexity 1 22 0 1 746 305 368 69 7 chr17 21129413 21129558 -74143093 - B3 SINE B2 -59 157 4 1 746 252 0 0 0 chr17 21129902 21129930 -74142721 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 746 1039 51 65 7 chr17 21130090 21130229 -74142422 + B1_Mus2 SINE Alu 1 147 0 1 746 805 245 85 0 chr17 21134053 21134359 -74138292 - Lx9 LINE L1 -12 7632 7301 1 746 418 259 8 8 chr17 21134367 21134484 -74138167 + Lx9 LINE L1 6712 6828 -816 1 746 576 102 0 0 chr17 21134543 21134641 -74138010 + (GA)n Simple_repeat Simple_repeat 1 98 0 1 746 1581 183 31 46 chr17 21134974 21135432 -74137219 + L1_Mur2 LINE L1 1602 2052 -3825 1 746 4121 175 40 46 chr17 21135433 21136475 -74136176 + L1_Mur2 LINE L1 2635 3670 -2207 1 746 1567 251 58 7 chr17 21136475 21136924 -74135727 + Lx5 LINE L1 6575 7046 -4 1 746 289 217 78 28 chr17 21137412 21137554 -74135097 - Lx9 LINE L1 -10 7634 7486 1 746 219 155 0 49 chr17 21137564 21137625 -74135026 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 746 1053 268 21 31 chr17 21137637 21138018 -74134633 - Lx9 LINE L1 -134 7510 7134 1 746 1190 55 0 0 chr17 21138037 21138182 -74134469 - B1_Mm SINE Alu 0 147 3 1 746 453 276 0 0 chr17 21138185 21138308 -74134343 - Lx9 LINE L1 -494 7150 7028 1 746 8097 129 22 7 chr17 21138308 21140172 -74132479 + Lx3B LINE L1 5071 6973 0 1 746 297 0 0 0 chr17 21140631 21140664 -74131987 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 746 357 43 0 0 chr17 21140664 21140710 -74131941 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 746 1270 294 75 43 chr17 21141395 21142086 -74130565 + Lx8 LINE L1 289 1001 -6727 1 746 851 111 13 13 chr17 21142088 21142243 -74130408 + L1_Mur2 LINE L1 4829 4983 -894 1 746 2269 131 111 35 chr17 21142245 21142696 -74129955 - Lx LINE L1 -3 6651 6167 1 746 472 308 96 29 chr17 21142715 21143029 -74129622 + Lx8 LINE L1 6351 6685 -788 1 746 6019 81 9 2 chr17 21143145 21143946 -74128705 + RLTR13D1 LTR ERVK 1 806 0 1 746 3219 68 0 0 chr17 21144075 21144475 -74128176 - MTB LTR MaLR 0 400 1 1 746 269 314 20 54 chr17 21144506 21144654 -74127997 - RLTR42-int LTR ERVK -4124 1398 1256 1 746 24 32 0 0 chr17 21145175 21145206 -74127445 + AT_rich Low_complexity Low_complexity 1 31 0 1 746 2540 167 35 60 chr17 21146385 21146921 -74125730 - RLTR28 LTR ERVL -1 523 1 1 746 23 0 0 0 chr17 21147470 21147493 -74125158 + AT_rich Low_complexity Low_complexity 1 23 0 1 746 1233 82 11 5 chr17 21147497 21147681 -74124970 - L1_Mus3 LINE L1 -7 6631 6447 1 746 260 128 0 0 chr17 21147681 21147720 -74124931 + L1_Mus3 LINE L1 6381 6419 -219 1 746 462 209 28 19 chr17 21148270 21148377 -74124274 + PB1D10 SINE Alu 2 109 -8 1 746 236 241 157 22 chr17 21148416 21148505 -74124146 - B1F SINE Alu 0 149 49 1 746 198 0 0 0 chr17 21149253 21149275 -74123376 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 1 746 2988 191 28 14 chr17 21149278 21149856 -74122795 - Lx5 LINE L1 -5 7045 6460 1 746 346 351 61 0 chr17 21150123 21150271 -74122380 - B4A SINE B4 -124 168 12 1 746 1257 89 50 0 chr17 21150506 21150685 -74121966 + B2_Mm2 SINE B2 2 189 -6 1 746 105 9 0 0 chr17 21150879 21150991 -74121660 + AT_rich Low_complexity Low_complexity 1 112 0 1 746 736 160 104 6 chr17 21151311 21151493 -74121158 - L1_Mur2 LINE L1 -1392 4488 4289 1 746 381 195 219 0 chr17 21151519 21151546 -74121105 - B4A SINE B4 -46 246 91 1 746 673 79 40 0 chr17 21151546 21151647 -74121004 - PB1D9 SINE Alu -10 110 6 1 746 333 0 0 0 chr17 21151647 21151684 -74120967 + (TTA)n Simple_repeat Simple_repeat 2 38 0 1 746 2463 51 10 0 chr17 21151685 21151998 -74120653 + MTA_Mm LTR MaLR 81 396 0 1 746 3271 206 57 61 chr17 21151998 21152538 -74120113 - L1_Mur2 LINE L1 -2333 3547 3002 1 746 459 52 0 0 chr17 21152538 21152596 -74120055 + (TTCC)n Simple_repeat Simple_repeat 2 59 0 1 746 1096 99 0 11 chr17 21152597 21152781 -74119870 - Lx LINE L1 -4 6650 6469 1 746 230 59 29 0 chr17 21152782 21152816 -74119835 + U2 snRNA snRNA 12 46 -142 1 746 3271 206 57 61 chr17 21152816 21153332 -74119319 - L1_Mur2 LINE L1 -2879 3000 2459 1 746 491 119 180 16 chr17 21153324 21153452 -74119199 - L1_Mus3 LINE L1 0 6638 6490 1 746 793 204 5 14 chr17 21153467 21153492 -74119159 - L1_Mur2 LINE L1 -4370 1507 1484 1 746 1186 74 0 0 chr17 21153492 21153640 -74119011 - B1_Mus1 SINE Alu 0 148 1 1 746 793 204 5 14 chr17 21153640 21153833 -74118818 - L1_Mur2 LINE L1 -4394 1483 1291 1 746 1427 242 71 41 chr17 21153885 21154324 -74118327 + RLTR11A LTR ERVK 77 528 0 1 746 839 231 51 110 chr17 21154325 21154753 -74117898 - L1_Mur2 LINE L1 -6439 1289 887 1 746 2255 173 254 16 chr17 21154896 21155507 -74117144 - RMER6A LTR ERVK 0 756 1 1 746 386 286 114 28 chr17 21156184 21156360 -74116291 - MER21B LTR ERV1 -11 852 662 1 746 1199 340 65 35 chr17 21156364 21156904 -74115747 - MER21B LTR ERV1 -307 556 1 1 746 221 283 0 0 chr17 21157223 21157269 -74115382 + polypyrimidine Low_complexity Low_complexity 1 46 0 1 746 225 268 0 0 chr17 21157384 21157425 -74115226 - B4 SINE B4 -166 126 86 1 746 573 285 0 0 chr17 21157955 21158099 -74114552 - B1F SINE Alu -1 148 5 1 746 257 342 0 12 chr17 21158225 21158305 -74114346 - PB1D10 SINE Alu -15 102 24 1 746 571 284 7 13 chr17 21158462 21158612 -74114039 + B1_Mur1 SINE Alu 1 149 0 1 746 380 293 105 31 chr17 21159425 21159749 -74112902 + L1M2 LINE L1 5407 5754 -537 1 746 429 167 0 0 chr17 21159757 21159835 -74112816 + CT-rich Low_complexity Low_complexity 4 81 0 1 746 219 69 0 0 chr17 21159835 21159864 -74112787 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 746 21 0 0 0 chr17 21160141 21160162 -74112489 + AT_rich Low_complexity Low_complexity 1 21 0 2 746 186 133 0 0 chr17 21160383 21160413 -74112238 + (TA)n Simple_repeat Simple_repeat 1 30 0 2 746 302 293 22 15 chr17 21160602 21160737 -74111914 - L1MA4 LINE L1 -365 5935 5800 2 746 477 220 35 0 chr17 21160823 21160939 -74111712 - B1_Mus2 SINE Alu 0 149 24 2 746 274 303 37 30 chr17 21160941 21161125 -74111526 - L1MA4 LINE L1 -523 5777 5593 2 746 663 291 5 11 chr17 21161219 21161403 -74111248 - B3A SINE B2 -15 183 1 2 746 294 95 0 0 chr17 21161421 21161463 -74111188 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 746 595 249 12 12 chr17 21162579 21164098 -74108553 + MMSAT4 Satellite Satellite 1 1519 -1 2 746 1297 275 93 6 chr17 21164874 21165240 -74107411 - MTD LTR MaLR -2 417 20 2 746 226 282 38 25 chr17 21165602 21165682 -74106969 + ID4 SINE ID 1 81 -2 2 746 284 296 76 72 chr17 21167884 21168135 -74104516 - IAPEY3-int LTR ERVK -2548 5132 4881 2 746 21 0 0 0 chr17 21168587 21168608 -74104043 + AT_rich Low_complexity Low_complexity 1 21 0 2 746 518 230 79 29 chr17 21169034 21169173 -74103478 + B3 SINE B2 65 210 -6 2 746 235 71 55 41 chr17 21169616 21169689 -74102962 + T-rich Low_complexity Low_complexity 2 75 0 2 746 31 58 0 0 chr17 21169906 21169958 -74102693 + AT_rich Low_complexity Low_complexity 1 52 0 2 746 281 233 168 25 chr17 21170253 21170372 -74102279 - Lx5 LINE L1 -1 7049 6914 2 746 390 310 34 8 chr17 21170770 21170887 -74101764 - RSINE1 SINE B4 -9 156 37 2 746 1388 207 177 9 chr17 21172194 21172628 -74100023 + L1Md_F LINE L1 90 596 -5923 2 746 246 128 0 0 chr17 21172628 21172667 -74099984 + L1Md_F LINE L1 190 228 -6291 2 746 406 127 0 0 chr17 21172668 21172731 -74099920 + L1Md_F LINE L1 166 228 -6291 2 746 504 97 0 0 chr17 21172732 21172804 -74099847 + L1Md_F LINE L1 166 237 -6282 2 746 2034 203 7 18 chr17 21172834 21173280 -74099371 + L1Md_F LINE L1 1 441 -6078 2 746 402 73 0 0 chr17 21173280 21173335 -74099316 + L1Md_F LINE L1 174 228 -6291 2 746 498 163 0 0 chr17 21173336 21173422 -74099229 + L1Md_F LINE L1 166 251 -6268 2 746 28900 20 1 0 chr17 21173420 21176740 -74095911 + L1Md_A LINE L1 2265 5586 -297 2 746 8539 32 4 0 chr17 21176740 21177732 -74094919 + L1Md_A LINE L1 5587 6582 0 2 746 2670 73 77 13 chr17 21180188 21180564 -74092087 - MTB LTR MaLR 0 400 1 2 746 824 74 8 0 chr17 21180719 21180840 -74091811 + (TG)n Simple_repeat Simple_repeat 2 123 0 2 746 207 0 0 0 chr17 21181331 21181354 -74091297 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 746 616 169 0 68 chr17 21182961 21183152 -74089499 + C-rich Low_complexity Low_complexity 3 180 0 2 746 396 143 122 0 chr17 21183198 21183295 -74089356 + PB1D9 SINE Alu 1 120 0 2 746 938 94 0 7 chr17 21184021 21184161 -74088490 + (TTCC)n Simple_repeat Simple_repeat 3 141 0 2 746 3122 104 7 5 chr17 21184742 21185175 -74087476 + RLTR10C LTR ERVK 1 434 -2 2 746 495 48 0 0 chr17 21186500 21186562 -74086089 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 746 284 308 26 0 chr17 21186961 21187039 -74085612 - ID4 SINE ID -1 82 3 2 746 1183 56 0 0 chr17 21187263 21187405 -74085246 + B1_Mm SINE Alu 1 142 -5 2 746 260 102 20 0 chr17 21189353 21189402 -74083249 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 746 189 0 0 0 chr17 21189513 21189534 -74083117 + (T)n Simple_repeat Simple_repeat 1 21 0 2 746 390 57 0 0 chr17 21195313 21195366 -74077285 + (CTG)n Simple_repeat Simple_repeat 1 53 0 2 746 448 265 22 15 chr17 21199028 21199162 -74073489 + B4 SINE B4 141 275 -17 2 746 325 320 0 17 chr17 21199215 21199396 -74073255 + (CA)n Simple_repeat Simple_repeat 1 178 0 2 746 420 296 0 11 chr17 21199410 21199591 -74073060 + (CA)n Simple_repeat Simple_repeat 1 179 0 2 746 288 309 26 26 chr17 21200088 21200201 -74072450 + B4A SINE B4 24 136 -156 2 746 243 0 0 0 chr17 21200764 21200791 -74071860 + (GAAAA)n Simple_repeat Simple_repeat 5 31 0 2 746 1695 243 16 38 chr17 21202361 21202866 -74069785 - L1VL4 LINE L1 -5595 763 90 2 746 4348 148 102 17 chr17 21202885 21203790 -74068861 - L1_Mur2 LINE L1 -2020 3857 2876 2 746 3235 128 28 29 chr17 21203792 21204370 -74068281 + RLTR13D6 LTR ERVK 1 577 -325 2 746 327 287 0 0 chr17 21205676 21205763 -74066888 + (CA)n Simple_repeat Simple_repeat 2 88 0 2 746 1040 71 0 0 chr17 21207716 21207856 -74064795 - B1_Mm SINE Alu -2 145 6 2 746 241 274 66 40 chr17 21208085 21208161 -74064490 + ID4 SINE ID 3 80 -3 2 746 300 53 0 0 chr17 21208563 21208601 -74064050 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 746 226 94 0 0 chr17 21208958 21208990 -74063661 + L1_Mur2 LINE L1 3454 3485 -2395 2 746 2324 150 40 20 chr17 21209012 21209461 -74063190 + L1_Mur2 LINE L1 3472 3929 -1948 2 746 29911 124 26 8 chr17 21209476 21215941 -74056710 + L1_Mus2 LINE L1 98 6566 0 2 746 254 20 78 20 chr17 21215966 21216017 -74056634 + (CAAA)n Simple_repeat Simple_repeat 3 56 0 2 746 345 47 0 0 chr17 21216160 21216203 -74056448 + (TAA)n Simple_repeat Simple_repeat 3 45 0 2 746 270 0 0 0 chr17 21216203 21216233 -74056418 + (GAA)n Simple_repeat Simple_repeat 1 30 0 2 746 185 323 0 46 chr17 21217645 21217710 -74054941 + L4 LINE RTE 624 685 -1344 2 746 2068 247 82 16 chr17 21219873 21220495 -74052156 - MTC-int LTR MaLR -594 664 2 2 746 2909 227 38 0 chr17 21221173 21221754 -74050897 - Lx5 LINE L1 -148 6902 6300 2 746 1389 291 96 60 chr17 21221757 21223019 -74049632 - L1_Mur3 LINE L1 -5742 1328 74 2 746 312 70 0 0 chr17 21223604 21223647 -74049004 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 746 2532 192 61 82 chr17 21223671 21223714 -74048937 - RLTR21 LTR ERVK -416 1156 1122 2 746 393 75 0 0 chr17 21223714 21223767 -74048884 + (CATA)n Simple_repeat Simple_repeat 1 53 0 2 746 3090 69 13 3 chr17 21223767 21224159 -74048492 - MTA_Mm LTR MaLR 0 396 1 2 746 414 69 0 0 chr17 21224160 21224218 -74048433 + (CATA)n Simple_repeat Simple_repeat 2 59 0 2 746 2532 192 61 82 chr17 21224218 21224891 -74047760 - RLTR21 LTR ERVK -451 1121 453 2 746 1618 141 19 42 chr17 21224891 21225201 -74047450 + Lx2 LINE L1 5989 6291 -706 2 746 497 226 18 55 chr17 21225202 21225366 -74047285 - RNLTR23 LTR ERVK 0 642 485 2 746 4464 118 30 6 chr17 21225632 21226328 -74046323 + Lx2 LINE L1 6284 6996 -1 2 746 1820 225 13 0 chr17 21226343 21226721 -74045930 - RLTR21 LTR ERVK -1097 475 93 2 746 198 0 0 0 chr17 21227076 21227098 -74045553 + (TTTTC)n Simple_repeat Simple_repeat 5 26 0 2 746 324 299 27 27 chr17 21227664 21227774 -74044877 - B4A SINE B4 -159 133 24 2 746 366 305 0 11 chr17 21228272 21228451 -74044200 + (TG)n Simple_repeat Simple_repeat 1 177 0 2 746 204 244 0 0 chr17 21228536 21228626 -74044025 + (TG)n Simple_repeat Simple_repeat 1 90 0 2 746 277 312 30 23 chr17 21228713 21228844 -74043807 - B4A SINE B4 -17 275 144 2 746 311 339 41 51 chr17 21229915 21230111 -74042540 - L1M5 LINE L1 -2847 3299 3106 2 746 216 309 0 0 chr17 21233271 21233326 -74039325 + MIRm SINE MIR 117 171 -105 2 747 228 288 0 121 chr17 21234428 21234519 -74038132 - LTR48 LTR ERV1 -656 131 52 2 747 311 314 103 36 chr17 21235887 21236052 -74036599 - HAL1-3A_ME LINE L1 -398 2460 2285 2 747 509 80 13 0 chr17 21236053 21236128 -74036523 + (TTTTC)n Simple_repeat Simple_repeat 3 78 0 2 747 864 118 15 0 chr17 21236139 21236275 -74036376 - B1_Mm SINE Alu -8 139 2 2 747 453 171 111 71 chr17 21236174 21236300 -74036351 - MT2B LTR ERVL -343 258 128 2 747 328 271 0 12 chr17 21236392 21236564 -74036087 + (TG)n Simple_repeat Simple_repeat 1 170 0 2 747 240 212 0 0 chr17 21236580 21236646 -74036005 + GA-rich Low_complexity Low_complexity 2 67 0 2 747 221 355 26 0 chr17 21240559 21240635 -74032016 + ID4 SINE ID 3 80 -3 2 747 216 310 56 22 chr17 21240635 21240648 -74032003 + ID_B1 SINE B4 3 94 -130 2 747 344 169 32 70 chr17 21241731 21241860 -74030791 + (TG)n Simple_repeat Simple_repeat 1 126 0 2 747 4051 94 57 7 chr17 21241860 21242458 -74030193 + RLTR5_Mm LTR ERV1 1 628 0 2 747 344 169 32 70 chr17 21242458 21242513 -74030138 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 747 239 263 111 49 chr17 21242513 21242657 -74029994 + Charlie5 DNA MER1_type 2372 2524 -100 2 747 342 115 0 0 chr17 21244932 21244984 -74027667 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 747 2814 85 2 35 chr17 21247443 21247846 -74024805 - MTB LTR MaLR 0 400 11 2 747 731 256 131 0 chr17 21248256 21248432 -74024219 - B3 SINE B2 -4 212 14 2 747 15886 53 2 1 chr17 21249389 21252037 -74020614 - L1Md_F3 LINE L1 0 6584 3932 2 747 1204 234 11 20 chr17 21252043 21252456 -74020195 - L1VL1 LINE L1 -6022 400 1 2 747 6977 108 2 24 chr17 21255653 21257004 -74015647 - L1_Mus2 LINE L1 0 6566 5247 2 747 306 289 0 0 chr17 21257466 21257556 -74015095 + L1MA9 LINE L1 6217 6306 -6 2 747 436 314 22 7 chr17 21258398 21258536 -74014115 - B1F1 SINE Alu -8 141 2 2 747 1223 30 18 12 chr17 21258539 21258708 -74013943 + (TTCC)n Simple_repeat Simple_repeat 4 173 0 2 747 768 143 6 13 chr17 21258720 21258876 -74013775 + CT-rich Low_complexity Low_complexity 3 157 0 2 747 453 36 0 0 chr17 21258929 21258984 -74013667 + (TTTA)n Simple_repeat Simple_repeat 3 57 0 2 747 561 194 54 27 chr17 21258986 21259134 -74013517 - B2_Mm2 SINE B2 -34 161 10 2 747 235 287 72 31 chr17 21260218 21260315 -74012336 - ORR1A3 LTR MaLR -196 130 30 2 747 402 286 97 53 chr17 21261867 21262114 -74010537 + L1_Mur2 LINE L1 507 764 -6322 2 747 1032 202 13 5 chr17 21262227 21262451 -74010200 + L1_Mur2 LINE L1 2189 2414 -3463 2 747 309 313 25 50 chr17 21263845 21263966 -74008685 - B4A SINE B4 -151 141 24 2 747 398 312 6 9 chr17 21264439 21264759 -74007892 + (TG)n Simple_repeat Simple_repeat 1 319 0 2 747 186 150 0 0 chr17 21264770 21264810 -74007841 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 747 484 297 30 15 chr17 21264897 21265086 -74007565 - B4 SINE B4 -17 275 81 3 747 554 99 11 0 chr17 21268677 21268768 -74003883 + (CAG)n Simple_repeat Simple_repeat 1 92 0 3 747 243 0 0 0 chr17 21271959 21271986 -74000665 + (A)n Simple_repeat Simple_repeat 1 27 0 3 747 630 91 0 0 chr17 21272098 21272197 -74000454 + (CA)n Simple_repeat Simple_repeat 1 99 0 3 747 11539 69 0 1 chr17 21273025 21274500 -73998151 + L1_Mm LINE L1 4332 5805 -78 3 747 2964 81 13 0 chr17 21274587 21274982 -73997669 - MTB LTR MaLR 0 400 1 3 747 663 263 134 0 chr17 21275401 21275572 -73997079 - B3 SINE B2 -4 212 19 3 747 6979 101 1 32 chr17 21278896 21280258 -73992393 - L1_Mus2 LINE L1 0 6566 5247 3 747 307 289 0 0 chr17 21280712 21280802 -73991849 + L1MA9 LINE L1 6217 6306 -6 3 747 198 0 0 0 chr17 21280877 21280899 -73991752 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 747 399 267 25 25 chr17 21281652 21281771 -73990880 - B1F SINE Alu -10 139 21 3 747 591 155 22 44 chr17 21281798 21281882 -73990769 + polypyrimidine Low_complexity Low_complexity 101 180 0 3 747 1304 62 11 0 chr17 21281882 21282060 -73990591 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 747 591 155 22 44 chr17 21282060 21282157 -73990494 + polypyrimidine Low_complexity Low_complexity 4 100 0 3 747 189 0 0 0 chr17 21282177 21282198 -73990453 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 3 747 499 154 55 0 chr17 21282236 21282346 -73990305 - B2_Mm2 SINE B2 -70 125 10 3 747 378 295 98 49 chr17 21285085 21285331 -73987320 + L1_Mur2 LINE L1 507 764 -6322 3 747 1080 193 13 5 chr17 21285444 21285668 -73986983 + L1_Mur2 LINE L1 2189 2414 -3463 3 747 292 304 25 50 chr17 21287054 21287175 -73985476 - B4A SINE B4 -151 141 24 3 747 311 307 3 10 chr17 21287648 21287970 -73984681 + (TG)n Simple_repeat Simple_repeat 1 319 0 3 747 186 150 0 0 chr17 21287981 21288021 -73984630 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 747 439 280 22 15 chr17 21288108 21288242 -73984409 - B4 SINE B4 -17 275 141 3 747 584 70 12 0 chr17 21291903 21291989 -73980662 + (CAG)n Simple_repeat Simple_repeat 3 89 0 3 747 183 42 0 0 chr17 21295183 21295207 -73977444 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 3 747 399 113 0 0 chr17 21295318 21295389 -73977262 + (CA)n Simple_repeat Simple_repeat 1 71 0 3 747 11560 70 0 1 chr17 21296235 21297710 -73974941 + L1_Mm LINE L1 4332 5805 -78 3 747 2954 81 13 0 chr17 21297797 21298192 -73974459 - MTB LTR MaLR 0 400 1 3 747 600 253 139 0 chr17 21298611 21298777 -73973874 - B3 SINE B2 -4 212 24 3 747 6989 101 1 32 chr17 21302108 21303470 -73969181 - L1_Mus2 LINE L1 0 6566 5247 3 747 307 289 0 0 chr17 21303924 21304014 -73968637 + L1MA9 LINE L1 6217 6306 -6 3 747 198 0 0 0 chr17 21304089 21304111 -73968540 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 747 399 267 25 25 chr17 21304864 21304983 -73967668 - B1F SINE Alu -10 139 21 3 747 497 161 24 42 chr17 21305005 21305090 -73967561 + polypyrimidine Low_complexity Low_complexity 85 165 0 3 747 1400 39 11 0 chr17 21305090 21305268 -73967383 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 747 497 161 24 42 chr17 21305268 21305350 -73967301 + polypyrimidine Low_complexity Low_complexity 2 84 0 3 747 189 0 0 0 chr17 21305397 21305418 -73967233 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 3 747 499 154 55 0 chr17 21305456 21305566 -73967085 - B2_Mm2 SINE B2 -70 125 10 3 747 299 317 0 0 chr17 21306770 21306852 -73965799 + RMER30 DNA MER1_type 1 82 -120 3 747 389 284 94 62 chr17 21308310 21308554 -73964097 + L1_Mur2 LINE L1 513 764 -6322 3 747 1118 184 13 5 chr17 21308667 21308891 -73963760 + L1_Mur2 LINE L1 2189 2414 -3463 3 747 292 304 25 50 chr17 21310277 21310398 -73962253 - B4A SINE B4 -151 141 24 3 747 414 303 6 22 chr17 21310871 21311238 -73961413 + (TG)n Simple_repeat Simple_repeat 1 360 0 3 747 439 280 22 15 chr17 21311325 21311459 -73961192 - B4 SINE B4 -17 275 141 3 747 446 96 14 0 chr17 21315105 21315178 -73957473 + (CAG)n Simple_repeat Simple_repeat 1 74 0 3 747 198 0 0 0 chr17 21318369 21318391 -73954260 + (A)n Simple_repeat Simple_repeat 1 22 0 3 747 561 105 0 0 chr17 21318503 21318598 -73954053 + (CA)n Simple_repeat Simple_repeat 1 95 0 3 747 11445 71 1 1 chr17 21319444 21320919 -73951732 + L1_Mm LINE L1 4332 5805 -78 3 747 2920 86 13 0 chr17 21321006 21321401 -73951250 - MTB LTR MaLR 0 400 1 3 747 602 247 139 0 chr17 21321820 21321986 -73950665 - B3 SINE B2 -4 212 24 3 747 6941 102 1 32 chr17 21325312 21326674 -73945977 - L1_Mus2 LINE L1 0 6566 5247 3 747 307 289 0 0 chr17 21327128 21327218 -73945433 + L1MA9 LINE L1 6217 6306 -6 3 747 198 0 0 0 chr17 21327293 21327315 -73945336 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 747 413 259 25 25 chr17 21328068 21328187 -73944464 - B1F SINE Alu -10 139 21 3 747 628 136 6 43 chr17 21328209 21328298 -73944353 + polypyrimidine Low_complexity Low_complexity 74 157 0 3 747 1022 101 11 22 chr17 21328298 21328480 -73944171 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 747 628 136 6 43 chr17 21328480 21328551 -73944100 + polypyrimidine Low_complexity Low_complexity 3 73 0 3 747 189 0 0 0 chr17 21328556 21328577 -73944074 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 3 747 499 154 55 0 chr17 21328615 21328725 -73943926 - B2_Mm2 SINE B2 -70 125 10 3 747 398 273 102 70 chr17 21331469 21331713 -73940938 + L1_Mur2 LINE L1 513 764 -6322 3 747 1107 188 13 5 chr17 21331826 21332050 -73940601 + L1_Mur2 LINE L1 2189 2414 -3463 3 747 272 313 25 50 chr17 21333445 21333566 -73939085 - B4A SINE B4 -151 141 24 3 747 398 312 6 9 chr17 21334039 21334359 -73938292 + (TG)n Simple_repeat Simple_repeat 1 319 0 3 747 186 150 0 0 chr17 21334370 21334410 -73938241 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 747 439 280 22 15 chr17 21334497 21334631 -73938020 - B4 SINE B4 -17 275 141 3 747 664 60 10 19 chr17 21338291 21338394 -73934257 + (CAG)n Simple_repeat Simple_repeat 3 104 0 3 747 35548 49 1 5 chr17 21341114 21346471 -73926180 + L1Md_T LINE L1 155 5589 -297 3 747 8646 31 0 0 chr17 21346471 21347467 -73925184 + L1Md_T LINE L1 5590 6585 0 3 747 6737 52 27 8 chr17 21348870 21349709 -73922942 - RLTR13A LTR ERVK 0 855 1 3 747 227 316 26 0 chr17 21350376 21350452 -73922199 + ID4 SINE ID 3 80 -3 3 747 288 130 0 0 chr17 21353578 21353624 -73919027 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 747 2926 38 109 0 chr17 21355191 21355559 -73917092 + IAPLTR2a LTR ERVK 4 411 0 3 747 1024 106 94 0 chr17 21355560 21355730 -73916921 + IAPEz-int LTR ERVK 9 194 -6287 3 747 242 296 0 0 chr17 21355730 21355784 -73916867 + RLTR27 LTR ERVK 222 275 -34 3 747 3462 95 21 37 chr17 21355784 21356435 -73916216 + IAPEz-int LTR ERVK 168 662 -5819 3 747 2634 79 0 6 chr17 21356435 21356779 -73915872 + IAPEz-int LTR ERVK 1359 1700 -4781 3 747 6120 63 43 11 chr17 21356772 21357577 -73915074 + IAPEz-int LTR ERVK 5651 6481 0 3 747 2795 30 0 18 chr17 21357577 21357910 -73914741 + IAPLTR2a LTR ERVK 1 327 0 3 747 2990 89 13 0 chr17 21358818 21359213 -73913438 - MTB LTR MaLR 0 400 1 3 747 636 246 137 0 chr17 21359656 21359831 -73912820 - B3 SINE B2 -4 212 14 3 747 182 37 0 36 chr17 21361683 21361711 -73910940 + (TTCC)n Simple_repeat Simple_repeat 2 28 0 3 747 428 289 95 86 chr17 21362009 21362450 -73910201 - RLTR11B LTR ERVK -41 412 1 3 748 351 0 0 0 chr17 21367347 21367386 -73905265 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 748 743 105 202 0 chr17 21367386 21367500 -73905151 - B1_Mus1 SINE Alu -10 138 2 3 748 767 235 185 9 chr17 21368477 21368709 -73903942 - Lx2B LINE L1 -5 6995 6723 3 748 423 0 0 0 chr17 21368709 21368764 -73903887 + RLTR1D LTR ERV1 1 55 -550 3 748 2448 218 19 47 chr17 21369149 21369723 -73902928 + RLTR1D LTR ERV1 48 605 0 3 748 1812 208 40 3 chr17 21369723 21370100 -73902551 - Lx4B LINE L1 -330 6728 6338 3 748 408 88 0 0 chr17 21370851 21370908 -73901743 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 748 2144 219 15 2 chr17 21370941 21371407 -73901244 + RLTR21 LTR ERVK 3 474 -1098 3 748 4403 126 24 6 chr17 21371422 21372122 -73900529 - Lx2 LINE L1 -1 6996 6284 3 748 440 234 18 37 chr17 21372389 21372553 -73900098 + RNLTR23 LTR ERVK 482 642 0 3 748 1745 133 25 40 chr17 21372554 21372875 -73899776 - Lx2 LINE L1 -706 6291 5976 3 748 2354 181 34 84 chr17 21372875 21373532 -73899119 + RLTR21 LTR ERVK 467 1090 -482 3 748 396 71 0 0 chr17 21373539 21373595 -73899056 + (TATG)n Simple_repeat Simple_repeat 4 59 0 3 748 3477 33 0 0 chr17 21373595 21373990 -73898661 - MTA_Mm LTR MaLR -1 395 1 3 748 501 17 0 0 chr17 21373990 21374048 -73898603 + (TATG)n Simple_repeat Simple_repeat 4 61 0 3 748 3157 69 5 2 chr17 21374048 21374442 -73898209 + MTA_Mm LTR MaLR 2 396 0 3 748 357 82 0 0 chr17 21374442 21374491 -73898160 + (TATG)n Simple_repeat Simple_repeat 1 49 0 3 748 327 85 0 0 chr17 21374558 21374605 -73898046 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 748 403 339 17 47 chr17 21374924 21375159 -73897492 - RMER15-int LTR ERVL -211 4788 4561 3 748 450 0 0 0 chr17 21375193 21375243 -73897408 + (TC)n Simple_repeat Simple_repeat 1 50 0 3 748 1597 309 122 36 chr17 21375250 21376271 -73896380 + L1_Mur3 LINE L1 102 1210 -6502 3 748 2915 218 43 0 chr17 21376344 21376922 -73895729 + Lx5 LINE L1 6300 6902 -148 3 748 286 245 93 31 chr17 21377359 21377456 -73895195 - RMER20B LTR ERVK -208 419 317 3 748 1962 250 84 16 chr17 21377715 21378336 -73894315 + MTC-int LTR MaLR 2 664 -594 3 748 8551 29 0 0 chr17 21380266 21381505 -73891146 - L1Md_T LINE L1 -1 6581 5343 3 748 185 323 0 46 chr17 21381716 21381781 -73890870 - L4 LINE RTE -1344 685 624 3 748 35409 72 5 3 chr17 21382260 21388002 -73884649 + L1Md_F2 LINE L1 331 6080 -502 3 748 5210 145 59 55 chr17 21388010 21389109 -73883542 - L1_Mus3 LINE L1 -285 6353 5292 3 748 3071 74 5 0 chr17 21389109 21389503 -73883148 - L1_Mus1 LINE L1 0 6567 6172 3 748 3751 231 187 142 chr17 21389503 21389661 -73882990 - L1_Mur2 LINE L1 -586 5291 5291 3 748 392 97 0 46 chr17 21389661 21389715 -73882936 + IAPEY_LTR LTR ERVK 1 54 -331 3 748 3036 63 8 0 chr17 21389715 21390097 -73882554 + IAPEY_LTR LTR ERVK 1 385 0 3 748 4027 220 118 97 chr17 21390107 21392378 -73880273 - L1_Mus3 LINE L1 -586 5291 2635 3 748 342 0 0 0 chr17 21392378 21392416 -73880235 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 748 4027 219 106 90 chr17 21392416 21392494 -73880157 - L1_Mus3 LINE L1 -3236 2644 2544 3 748 325 240 0 0 chr17 21392471 21392546 -73880105 - Lx7 LINE L1 -634 7062 6988 4 748 34 79 0 0 chr17 21395689 21395765 -73876886 + AT_rich Low_complexity Low_complexity 1 76 0 4 748 4879 82 13 20 chr17 21395827 21396528 -73876123 - L1_Mus3 LINE L1 -5 6633 5938 4 748 2489 86 0 0 chr17 21396528 21396950 -73875701 + L1_Mus3 LINE L1 5510 5931 -635 4 748 289 302 7 97 chr17 21398029 21398183 -73874468 - RMER10B LTR ERVL -62 336 197 4 748 22 0 0 0 chr17 21399704 21399726 -73872925 + AT_rich Low_complexity Low_complexity 1 22 0 4 748 290 115 16 0 chr17 21400265 21400326 -73872325 + (CAAAA)n Simple_repeat Simple_repeat 2 63 0 4 748 304 167 0 0 chr17 21400413 21400461 -73872190 - RMER19A LTR ERVK -637 100 53 4 748 417 170 0 138 chr17 21400451 21400567 -73872084 + MT2B LTR ERVL 165 264 -337 4 748 1126 22 0 28 chr17 21400463 21400606 -73872045 + B1_Mm SINE Alu 9 147 0 4 748 242 86 0 0 chr17 21400632 21400667 -73871984 - RMER19A LTR ERVK -867 35 1 4 748 865 175 7 0 chr17 21400669 21400823 -73871828 - ORR1A3-int LTR MaLR -1403 560 406 4 748 2839 174 21 39 chr17 21400824 21401393 -73871258 - RLTR31_Mm LTR ERVK 0 561 3 4 748 227 152 22 0 chr17 21401550 21401596 -73871055 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 4 748 524 165 135 18 chr17 21402002 21402113 -73870538 - ORR1A3-int LTR MaLR -1566 397 274 4 748 4932 149 35 47 chr17 21402118 21403442 -73869209 + Lx LINE L1 209 1514 -4372 4 748 9186 146 7 12 chr17 21403435 21405946 -73866705 + Lx LINE L1 4158 6651 -3 4 748 505 209 9 35 chr17 21405951 21406065 -73866586 + RMER12B LTR ERVK 1042 1152 -252 4 748 434 250 130 24 chr17 21406127 21406250 -73866401 + RLTR21 LTR ERVK 1437 1572 0 4 748 1124 82 7 0 chr17 21406556 21406702 -73865949 + B1_Mus1 SINE Alu 1 147 -1 4 748 216 200 0 0 chr17 21406703 21406753 -73865898 + A-rich Low_complexity Low_complexity 1 50 0 4 748 180 0 0 0 chr17 21407704 21407724 -73864927 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 748 354 167 0 35 chr17 21407724 21407806 -73864845 - Lx6 LINE L1 -6 7454 7375 4 748 288 143 35 35 chr17 21407874 21407932 -73864719 + MTD LTR MaLR 2 59 -360 4 748 696 240 108 3 chr17 21407917 21408108 -73864543 + MTD LTR MaLR 195 385 -34 4 748 355 314 61 41 chr17 21408201 21408397 -73864254 - RMER5 LTR ERV1 -248 286 87 4 748 234 0 0 0 chr17 21408418 21408444 -73864207 + (CAAT)n Simple_repeat Simple_repeat 2 27 0 4 748 532 92 0 0 chr17 21409027 21409114 -73863537 - L1_Mus3 LINE L1 -4 6634 6548 4 748 495 43 0 0 chr17 21409114 21409183 -73863468 + L1_Mus4 LINE L1 6258 6326 -310 4 748 1585 212 21 3 chr17 21409643 21410212 -73862439 + L1_Mur2 LINE L1 915 1497 -4380 4 748 531 378 21 5 chr17 21410588 21410777 -73861874 + ID_B1 SINE B4 12 203 -21 4 748 4288 174 38 10 chr17 21410989 21411809 -73860842 + Lx4A LINE L1 6214 7056 -2 4 748 573 156 101 22 chr17 21411848 21411986 -73860665 + Lx6 LINE L1 6363 6511 -949 4 748 7421 89 16 34 chr17 21412219 21413473 -73859178 - L1_Mus1 LINE L1 0 6567 5456 4 748 4910 145 44 31 chr17 21413473 21414368 -73858283 + RMER17A2 LTR ERVK 1 906 0 4 748 4463 231 31 128 chr17 21414368 21415745 -73856906 - L1_Mus1 LINE L1 -422 5455 4111 4 748 7862 81 8 5 chr17 21415767 21417566 -73855085 - L1Md_F2 LINE L1 0 6582 4777 4 748 3712 145 3 11 chr17 21417564 21418225 -73854426 + L1_Mur1 LINE L1 4875 5530 -356 4 748 1143 78 54 0 chr17 21418372 21418539 -73854112 - B2_Mm1t SINE B2 -8 185 10 4 748 5710 114 87 1 chr17 21418606 21419744 -73852907 - L1_Mus3 LINE L1 -2 6636 5400 4 748 516 168 0 0 chr17 21420131 21420232 -73852419 - L1_Mm LINE L1 -228 5655 5549 4 748 402 213 0 0 chr17 21421403 21421497 -73851154 + Lx9 LINE L1 7550 7643 -1 4 748 4198 89 2 14 chr17 21421907 21422490 -73850161 + L1_Mus2 LINE L1 5988 6563 -3 4 748 24 32 0 0 chr17 21422607 21422638 -73850013 + AT_rich Low_complexity Low_complexity 1 31 0 4 748 685 181 35 42 chr17 21422661 21422805 -73849846 + Lx5 LINE L1 6735 6877 -173 4 748 429 20 0 0 chr17 21424870 21424920 -73847731 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 748 377 371 13 13 chr17 21425468 21425621 -73847030 + B3 SINE B2 4 156 -60 4 748 2135 241 54 9 chr17 21428056 21428608 -73844043 - RLTR20B3 LTR ERVK 0 577 1 4 748 18981 131 29 3 chr17 21429435 21433382 -73839269 - L1Md_F LINE L1 -1450 4433 380 4 748 2033 41 30 0 chr17 21433405 21433672 -73838979 + L1_Mus1 LINE L1 6143 6417 -150 4 748 854 232 0 5 chr17 21433659 21433871 -73838780 + L1_Mur3 LINE L1 1644 1854 -4026 4 748 2465 128 41 0 chr17 21433872 21434262 -73838389 + Lx3_Mus LINE L1 6596 7001 -8 4 748 257 139 0 0 chr17 21434314 21434357 -73838294 + L1_Mur3 LINE L1 5351 5393 -487 4 748 935 181 10 24 chr17 21434355 21434367 -73838284 - Lx2 LINE L1 -729 6268 6257 4 748 297 51 0 0 chr17 21434367 21434406 -73838245 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 748 935 181 10 24 chr17 21434406 21434602 -73838049 - Lx2 LINE L1 -741 6256 6064 4 748 368 265 66 44 chr17 21434600 21434872 -73837779 + L1_Mur3 LINE L1 1916 2193 -3687 4 748 968 244 22 0 chr17 21434942 21435258 -73837393 + L1_Mur3 LINE L1 5225 5547 -333 4 748 514 313 34 34 chr17 21435255 21435546 -73837105 - Lx8 LINE L1 -414 7059 6769 4 748 4240 82 2 13 chr17 21435738 21436355 -73836296 + L1Md_F LINE L1 414 1023 -5496 4 748 30675 86 2 17 chr17 21436355 21441721 -73830930 + L1Md_F2 LINE L1 305 5586 -297 4 748 7600 70 0 6 chr17 21441721 21442722 -73829929 + L1Md_F2 LINE L1 5587 6581 -1 4 748 267 114 0 0 chr17 21443273 21443317 -73829334 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4 748 3420 33 2 0 chr17 21444755 21445150 -73827501 - MTA_Mm LTR MaLR 0 396 1 4 748 1845 294 34 13 chr17 21445432 21446046 -73826605 + Lx6 LINE L1 6832 7458 -2 4 748 739 258 32 5 chr17 21446074 21446292 -73826359 + URR1A DNA MER1_type 1 224 -2 4 748 304 56 13 66 chr17 21446340 21446416 -73826235 + (TTTTG)n Simple_repeat Simple_repeat 2 73 0 4 748 4357 165 50 62 chr17 21446420 21447439 -73825212 - Lx LINE L1 -2 6652 5646 4 748 348 24 0 0 chr17 21449843 21449884 -73822767 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 748 713 317 17 0 chr17 21449886 21450066 -73822585 - B3 SINE B2 -31 185 3 4 748 220 196 17 35 chr17 21452283 21452341 -73820310 + (TATATG)n Simple_repeat Simple_repeat 4 60 0 4 748 951 265 18 175 chr17 21452387 21452820 -73819831 + MTD LTR MaLR 5 362 -34 4 748 28151 115 11 6 chr17 21452820 21455785 -73816866 - L1_Mus2 LINE L1 -111 6455 3488 4 748 378 0 0 0 chr17 21455785 21455827 -73816824 + (TTG)n Simple_repeat Simple_repeat 1 42 0 4 748 28151 125 9 20 chr17 21455827 21458387 -73814264 - L1_Mus2 LINE L1 -2396 3487 940 4 748 279 0 0 0 chr17 21458387 21458418 -73814233 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 748 2233 140 2 154 chr17 21458418 21458441 -73814210 - L1_Mus2 LINE L1 -5718 939 936 4 748 2875 72 0 0 chr17 21458441 21458818 -73813833 - L1_Mus1 LINE L1 0 6567 6191 4 748 2233 144 3 154 chr17 21458818 21459043 -73813608 - L1_Mus2 LINE L1 -5677 939 731 4 748 386 301 58 39 chr17 21459140 21459403 -73813248 - L1VL1 LINE L1 -5932 490 214 4 748 1106 89 7 0 chr17 21459847 21459993 -73812658 + B1_Mus1 SINE Alu 1 147 -1 4 748 461 337 124 30 chr17 21461173 21461375 -73811276 - B4 SINE B4 -67 225 5 4 748 457 301 104 74 chr17 21461305 21461574 -73811077 - MER2 DNA MER2_type -58 287 11 4 748 599 314 20 25 chr17 21461681 21461880 -73810771 + B3A SINE B2 1 198 0 4 748 351 0 0 0 chr17 21461966 21462005 -73810646 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 748 346 347 0 69 chr17 21462102 21462232 -73810419 - B4A SINE B4 -74 218 98 4 748 384 252 165 0 chr17 21462261 21462388 -73810263 - B1_Mur3 SINE Alu -1 148 1 4 748 329 220 9 0 chr17 21462438 21462526 -73810125 + L1_Mur1 LINE L1 690 831 -6153 4 748 2507 187 35 12 chr17 21462645 21463057 -73809594 + L1_Mur1 LINE L1 755 1182 -5802 4 748 2160 39 0 0 chr17 21463057 21463316 -73809335 + L1Md_A LINE L1 6321 6579 -3 4 748 8833 203 139 36 chr17 21463316 21465543 -73807108 + L1_Mur1 LINE L1 1183 3751 -2126 4 748 3262 82 2 0 chr17 21465543 21465971 -73806680 + L1_Mus1 LINE L1 6139 6567 0 4 748 8833 204 147 38 chr17 21465971 21466719 -73805932 + L1_Mur1 LINE L1 3752 4479 -1398 4 748 7448 129 46 24 chr17 21466715 21468092 -73804559 + Lx3A LINE L1 5552 6967 -14 4 748 261 0 0 0 chr17 21468092 21468121 -73804530 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 4 748 776 134 0 7 chr17 21468127 21468262 -73804389 + (GGAA)n Simple_repeat Simple_repeat 3 136 0 4 748 2814 158 85 12 chr17 21468270 21468776 -73803875 + RLTR33 LTR ERVK 1 543 -135 4 748 2821 179 18 7 chr17 21468776 21469349 -73803302 - L1_Mur2 LINE L1 -662 5215 4637 4 748 2805 148 8 0 chr17 21469337 21469822 -73802829 + L1_Mm LINE L1 5364 5852 -31 4 748 262 80 40 0 chr17 21469828 21469878 -73802773 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 748 3559 181 25 5 chr17 21470207 21470836 -73801815 - RLTR26 LTR ERVK 0 642 1 4 748 256 130 0 80 chr17 21471102 21471152 -73801499 + L1_Mus3 LINE L1 4815 4860 -1023 4 748 6859 111 18 4 chr17 21471165 21472726 -73799925 + L1_Mus3 LINE L1 5050 6638 0 4 748 506 16 16 0 chr17 21472775 21472838 -73799813 + (TG)n Simple_repeat Simple_repeat 2 65 0 4 748 257 127 0 35 chr17 21472903 21472960 -73799691 + (TATAA)n Simple_repeat Simple_repeat 5 59 0 4 748 276 298 0 9 chr17 21473307 21473422 -73799229 + (TA)n Simple_repeat Simple_repeat 2 115 0 4 748 7613 49 13 1 chr17 21474471 21475783 -73796868 - L1Md_F3 LINE L1 -1 6583 5260 4 748 1944 152 6 14 chr17 21475790 21476149 -73796502 - IAPLTR1_Mm LTR ERVK -11 356 1 4 748 53631 23 4 13 chr17 21476149 21482689 -73789962 - IAPEz-int LTR ERVK 0 6481 1 4 748 1944 152 6 14 chr17 21482690 21483049 -73789602 - IAPLTR1_Mm LTR ERVK -11 356 1 4 748 29895 59 4 7 chr17 21483049 21487449 -73785202 - L1Md_F3 LINE L1 -617 5266 891 4 748 6400 74 7 5 chr17 21487448 21488344 -73784307 + L1_Mus1 LINE L1 5676 6654 0 4 748 2266 214 120 45 chr17 21488459 21489209 -73783442 + RLTR19-int LTR ERVK 2184 2989 -3148 4 748 251 148 131 0 chr17 21489209 21489270 -73783381 + RLTR19-int LTR ERVK 2951 3019 -3118 4 748 245 65 0 0 chr17 21489275 21489306 -73783345 - ORR1A4 LTR MaLR -8 321 291 4 748 15997 142 20 12 chr17 21489385 21493596 -73779055 - Lx2B LINE L1 0 7000 2760 4 748 22 0 0 0 chr17 21493655 21493677 -73778974 + AT_rich Low_complexity Low_complexity 1 22 0 4 748 495 262 21 21 chr17 21493828 21494015 -73778636 + RLTR19-int LTR ERVK 3574 3760 -2377 4 93 28950 108 8 4 chr17 21494383 21496302 -73776349 - L1_Mus1 LINE L1 -1 6566 4640 4 749 3108 66 2 5 chr17 21496302 21496699 -73775952 - MTA_Mm LTR MaLR 0 396 1 4 749 28950 108 5 4 chr17 21496699 21500000 -73772651 - L1_Mus1 LINE L1 -1244 4639 1341 4 749 5565 73 9 73 chr17 21500000 21500918 -73771733 - L1VL1 LINE L1 -5298 1124 266 1 749 2133 130 6 3 chr17 21501494 21501810 -73770841 - ORR1A2 LTR MaLR -10 317 1 2 749 785 301 41 70 chr17 21501970 21502875 -73769776 - L1MA5 LINE L1 -364 5936 5075 3 749 2878 95 69 63 chr17 21502945 21503438 -73769213 + Lx LINE L1 6157 6652 -2 4 749 334 304 0 0 chr17 21503825 21503940 -73768711 + MurSatRep1 Unknown Unknown 631 745 -1392 5 749 232 276 11 0 chr17 21504180 21504257 -73768394 - Lx6 LINE L1 -4 7456 7379 6 749 1845 151 54 88 chr17 21504257 21504664 -73767987 - RLTR9C LTR ERVK 0 393 1 7 749 358 125 0 0 chr17 21504675 21504739 -73767912 - ETnERV2-int LTR ERVK -12 7394 7331 8 749 3591 192 26 40 chr17 21504954 21506995 -73765656 - ETnERV2-int LTR ERVK -3321 4085 2351 8 749 966 133 0 18 chr17 21507550 21507718 -73764933 - RLTR13D1 LTR ERVK -156 650 486 9 749 1769 131 6 13 chr17 21507718 21508034 -73764617 - ETnERV2-int LTR ERVK -4409 2997 2684 8 749 4738 62 27 46 chr17 21508061 21508732 -73763919 - L1Md_F2 LINE L1 -1 6581 5924 1 749 3882 43 19 0 chr17 21508732 21509198 -73763453 - MT2C_Mm LTR ERVL 0 475 1 1 749 302 0 0 0 chr17 21509198 21509236 -73763415 - MERVL-int LTR ERVL 0 5485 5448 1 749 371 111 26 53 chr17 21509236 21509312 -73763339 - ORR1A3-int LTR MaLR -1323 640 567 1 749 18493 42 0 0 chr17 21509312 21511599 -73761052 - MERVL-int LTR ERVL -114 5371 3085 1 749 919 55 11 24 chr17 21511826 21511956 -73760695 + B1_Mm SINE Alu 16 147 0 1 749 21 0 0 0 chr17 21511974 21511995 -73760656 + AT_rich Low_complexity Low_complexity 1 21 0 1 749 540 234 12 47 chr17 21512182 21512586 -73760065 + MMSAT4 Satellite Satellite 1 389 0 1 749 525 237 17 18 chr17 21512612 21513257 -73759394 + MMSAT4 Satellite Satellite 1 644 0 1 749 767 286 28 9 chr17 21513511 21513723 -73758928 - B3 SINE B2 0 216 1 1 749 615 252 28 0 chr17 21513777 21513920 -73758731 + B1_Mur3 SINE Alu 2 148 -1 1 749 722 269 59 50 chr17 21513942 21514283 -73758368 + RLTR15 LTR ERVK 1 344 -15 1 749 443 235 40 81 chr17 21515143 21515291 -73757360 + MurERV4-int LTR ERVK 4543 4684 -576 1 749 367 266 18 9 chr17 21515336 21515450 -73757201 - Lx7 LINE L1 -1950 5746 5632 2 749 653 240 46 0 chr17 21515575 21515750 -73756901 - URR1A DNA MER1_type 0 226 44 2 749 927 285 83 108 chr17 21515795 21516233 -73756418 + RMER15 LTR ERVL 27 463 -112 2 749 599 264 70 20 chr17 21516233 21516434 -73756217 + B3 SINE B2 2 212 -4 2 749 927 285 83 108 chr17 21516434 21516558 -73756093 + RMER15 LTR ERVL 464 575 0 2 749 231 209 22 44 chr17 21516804 21516894 -73755757 + T-rich Low_complexity Low_complexity 2 89 0 2 749 461 160 38 0 chr17 21516904 21517010 -73755641 - Lx9 LINE L1 -9 7635 7526 2 749 491 45 15 0 chr17 21517016 21517082 -73755569 + (TA)n Simple_repeat Simple_repeat 2 68 0 2 749 2895 225 79 15 chr17 21517092 21517881 -73754770 - Lx9 LINE L1 -184 7460 6622 2 749 486 267 28 49 chr17 21517887 21518029 -73754622 - B1_Mur1 SINE Alu -1 148 10 2 749 4311 78 3 0 chr17 21518118 21518684 -73753967 - L1_Mus4 LINE L1 -5 6631 6064 2 749 225 0 0 0 chr17 21518768 21518793 -73753858 + (CCA)n Simple_repeat Simple_repeat 3 27 0 2 749 732 68 0 0 chr17 21519033 21519136 -73753515 + (TG)n Simple_repeat Simple_repeat 1 103 0 3 749 3898 138 55 45 chr17 21519330 21520079 -73752572 - RMER6A LTR ERVK 0 756 1 3 749 225 0 0 0 chr17 21521218 21521243 -73751408 + (CAA)n Simple_repeat Simple_repeat 3 27 0 3 749 225 0 0 0 chr17 21521585 21521610 -73751041 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 3 749 195 146 0 0 chr17 21523593 21523634 -73749017 + (TCTA)n Simple_repeat Simple_repeat 4 44 0 3 749 24 53 0 0 chr17 21523652 21523690 -73748961 + AT_rich Low_complexity Low_complexity 1 38 0 3 749 4305 217 52 12 chr17 21523791 21524866 -73747785 - Lx9 LINE L1 -221 7423 6306 3 749 657 251 27 35 chr17 21524961 21525034 -73747617 - Lx9 LINE L1 -1597 6047 5977 3 749 1372 81 5 0 chr17 21525034 21525219 -73747432 - B2_Mm1t SINE B2 -7 186 1 3 749 218 56 0 27 chr17 21525226 21525263 -73747388 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 749 657 251 27 35 chr17 21525263 21525441 -73747210 - Lx9 LINE L1 -1674 5970 5791 3 749 329 141 198 32 chr17 21525442 21525577 -73747074 - B2_Mm2 SINE B2 -6 189 15 3 749 1312 80 11 0 chr17 21525594 21525770 -73746881 - B2_Mm1t SINE B2 -14 179 2 4 749 898 245 98 23 chr17 21525772 21526279 -73746372 - L1_Mur2 LINE L1 -332 5824 5234 4 749 276 30 0 0 chr17 21526461 21526494 -73746157 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 749 12305 12 0 1 chr17 21526599 21528044 -73744607 + MERVL-int LTR ERVL 869 2312 -3173 4 749 628 321 74 101 chr17 21528181 21528586 -73744065 - RMER20B LTR ERVK -28 599 206 4 749 243 0 0 0 chr17 21528928 21528955 -73743696 + (TTG)n Simple_repeat Simple_repeat 2 28 0 4 749 422 86 0 0 chr17 21529866 21529924 -73742727 + ORR1B1 LTR MaLR 337 394 0 4 749 258 330 0 0 chr17 21530157 21530272 -73742379 + MurSatRep1 Unknown Unknown 631 745 -1392 4 749 2326 228 41 27 chr17 21530480 21531043 -73741608 - Lx5 LINE L1 -3 7047 6477 4 749 2152 219 8 21 chr17 21532078 21532553 -73740098 - Lx5 LINE L1 -144 6906 6438 4 749 288 268 0 27 chr17 21532580 21532726 -73739925 - Lx5 LINE L1 -6666 1062 860 4 749 1192 41 14 0 chr17 21533243 21533388 -73739263 - B1_Mm SINE Alu 0 147 1 5 749 551 259 24 26 chr17 21534186 21536077 -73736574 + MMSAT4 Satellite Satellite 1 1887 0 5 749 715 301 0 24 chr17 21536997 21537164 -73735487 - B3 SINE B2 -50 166 4 5 749 250 158 0 0 chr17 21537219 21537257 -73735394 + B1_Mus2 SINE Alu 2 39 -108 5 749 412 278 33 112 chr17 21537487 21537702 -73734949 - RLTR16 LTR ERVK -227 278 81 5 749 883 207 4 4 chr17 21537744 21538017 -73734634 + GA-rich Low_complexity Low_complexity 1 273 0 5 749 1906 190 57 14 chr17 21538017 21538438 -73734213 - RMER10A LTR ERVL -1 441 3 5 749 4096 31 4 0 chr17 21538762 21539242 -73733409 - LTRIS_Mm LTR ERV1 0 482 1 5 749 2370 56 73 64 chr17 21539640 21539983 -73732668 - ORR1A1 LTR MaLR 0 346 1 5 749 1257 102 0 26 chr17 21540078 21540270 -73732381 + B2_Mm2 SINE B2 1 187 -8 5 749 934 209 90 74 chr17 21540286 21540647 -73732004 - MYSERV-int LTR ERVK -2106 4031 3713 6 749 3896 83 4 2 chr17 21540647 21541165 -73731486 + L1_Mus3 LINE L1 6119 6637 -1 6 749 934 219 86 123 chr17 21541165 21541407 -73731244 - MYSERV-int LTR ERVK -2425 3712 3485 6 749 3007 105 40 100 chr17 21541471 21542023 -73730628 - MURVY-LTR LTR ERV1 0 519 1 6 749 296 183 179 17 chr17 21542238 21542355 -73730296 - MYSERV6-int LTR ERVK -276 8683 8548 6 749 366 274 56 9 chr17 21542407 21542514 -73730137 - RMER12B LTR ERVK -109 1295 1184 6 749 2523 199 52 89 chr17 21542516 21542612 -73730039 - RLTR21 LTR ERVK -955 617 563 6 749 717 112 16 49 chr17 21542612 21542734 -73729917 - PB1D9 SINE Alu 0 120 3 6 749 2523 199 52 89 chr17 21542734 21543278 -73729373 - RLTR21 LTR ERVK -1010 562 1 6 749 1227 266 66 57 chr17 21543278 21543820 -73728831 - MYSERV-int LTR ERVK -467 6083 5593 6 749 814 115 5 3 chr17 21543833 21544061 -73728590 - ORR1A2 LTR MaLR -8 386 1 6 749 542 252 45 10 chr17 21544066 21544266 -73728385 - RLTR42-int LTR ERVK -3395 2127 1921 6 749 2641 164 24 20 chr17 21545035 21545528 -73727123 + RLTR19 LTR ERVK 1 495 -4 6 749 288 231 117 14 chr17 21545659 21545806 -73726845 - RLTR42-int LTR ERVK -3741 1781 1559 6 749 21 57 0 0 chr17 21545841 21545876 -73726775 + AT_rich Low_complexity Low_complexity 1 35 0 7 749 25 31 0 0 chr17 21546075 21546107 -73726544 + AT_rich Low_complexity Low_complexity 1 32 0 7 749 1682 214 71 27 chr17 21546107 21546516 -73726135 - RMER10A LTR ERVL -15 427 1 7 749 1134 162 5 5 chr17 21546674 21546866 -73725785 - RMER6A LTR ERVK 0 756 565 7 749 1634 247 82 117 chr17 21546866 21547688 -73724963 + RLTR22_Mur LTR ERVK 1 793 -1055 7 749 263 232 0 0 chr17 21547696 21547752 -73724899 - RLTR33 LTR ERVK -3 675 620 7 749 3000 122 13 17 chr17 21547748 21548214 -73724437 - MT2C_Mm LTR ERVL -10 465 2 7 749 5080 131 110 154 chr17 21548214 21548262 -73724389 + MTB-int LTR MaLR 3 50 -1208 7 749 324 0 0 0 chr17 21548262 21548298 -73724353 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 7 749 5080 131 110 154 chr17 21548298 21548554 -73724097 + MTB-int LTR MaLR 51 306 -952 7 749 1160 34 7 40 chr17 21548554 21548706 -73723945 + B1_Mus2 SINE Alu 1 147 0 7 749 5080 131 110 154 chr17 21548706 21549713 -73722938 + MTB-int LTR MaLR 307 1258 0 7 749 2972 76 8 8 chr17 21549713 21550113 -73722538 + MTB LTR MaLR 1 400 0 7 749 619 270 49 25 chr17 21550123 21550286 -73722365 - RMER2 LTR ERV1 -389 178 12 8 749 1034 299 89 22 chr17 21550450 21550864 -73721787 + RMER15 LTR ERVL 26 467 -108 8 749 789 285 20 0 chr17 21550865 21551065 -73721586 + B3 SINE B2 2 205 -11 8 749 419 230 62 31 chr17 21551063 21551193 -73721458 + RMER15 LTR ERVL 442 575 0 8 749 21 36 0 0 chr17 21551399 21551427 -73721224 + AT_rich Low_complexity Low_complexity 1 28 0 8 749 352 244 104 16 chr17 21551448 21551573 -73721078 + L1MDb LINE L1 1061 1196 -5213 8 749 30500 96 9 1 chr17 21551847 21557201 -73715450 - L1_Mus1 LINE L1 0 6567 1173 8 749 5134 95 19 29 chr17 21557193 21558331 -73714320 - L1VL1 LINE L1 -4377 1506 374 8 749 3910 93 71 5 chr17 21558381 21558945 -73713706 + MT2B LTR ERVL 1 601 0 8 749 994 234 62 65 chr17 21558949 21559274 -73713377 + MERVL_2A-int LTR ERVL 5 328 -5433 8 749 1518 163 12 0 chr17 21559268 21559513 -73713138 + MERVL_2A-int LTR ERVL 1396 1643 -4118 8 749 559 220 40 0 chr17 21559513 21559663 -73712988 - Lx9 LINE L1 -589 7055 6900 8 749 190 200 109 0 chr17 21560354 21560409 -73712242 - L2 LINE L2 -3008 411 351 8 749 204 188 0 0 chr17 21561348 21561380 -73711271 + polypurine Low_complexity Low_complexity 2 33 0 9 749 4213 231 56 28 chr17 21562299 21562546 -73710105 - Lx9 LINE L1 -167 7477 7200 9 749 1561 47 0 20 chr17 21562546 21562742 -73709909 - B2_Mm1a SINE B2 -1 192 1 9 749 4213 258 51 24 chr17 21562742 21564247 -73708404 - Lx9 LINE L1 -445 7199 5525 9 749 235 282 45 0 chr17 21564465 21564575 -73708076 - L1MEg LINE L1 -4664 1420 1306 9 749 819 257 107 41 chr17 21565253 21565586 -73707065 - L1_Rod LINE L1 -33 5814 5483 9 749 417 20 0 0 chr17 21565586 21565636 -73707015 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 749 819 231 198 27 chr17 21565636 21565857 -73706794 - L1_Rod LINE L1 -750 5541 5285 9 749 1375 79 21 0 chr17 21565979 21566168 -73706483 + B2_Mm1t SINE B2 1 193 0 9 749 306 311 25 20 chr17 21566297 21566497 -73706154 - L1_Rod LINE L1 -879 5264 5064 9 749 333 255 0 0 chr17 21567176 21567274 -73705377 + MurSatRep1 Unknown Unknown 631 728 -1409 9 749 533 157 81 15 chr17 21567527 21567663 -73704988 - Lx6 LINE L1 -2 7458 7314 9 749 1358 88 0 10 chr17 21567668 21567828 -73704823 + B2_Mm1t SINE B2 1 160 -33 9 749 207 88 0 0 chr17 21567828 21567862 -73704789 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 1 749 1358 88 0 10 chr17 21567862 21567896 -73704755 + B2_Mm1t SINE B2 161 193 0 9 749 3027 217 71 8 chr17 21567900 21568616 -73704035 - Lx6 LINE L1 -176 7284 6524 9 749 1109 77 14 0 chr17 21569371 21569514 -73703137 + B1_Mus1 SINE Alu 2 146 -2 1 749 257 0 0 29 chr17 21569518 21569552 -73703099 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 1 749 369 256 14 49 chr17 21569605 21569749 -73702902 + Lx4B LINE L1 6920 7058 0 1 749 183 42 0 0 chr17 21569777 21569801 -73702850 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 1 749 665 242 16 19 chr17 21570733 21571964 -73700687 + MMSAT4 Satellite Satellite 1 1228 0 1 749 666 267 67 67 chr17 21572137 21572330 -73700321 - B3 SINE B2 -4 212 20 1 749 397 200 47 12 chr17 21572424 21572510 -73700141 + B1_Mur2 SINE Alu 34 122 -27 1 749 681 246 46 89 chr17 21572534 21572753 -73699898 - RLTR15 LTR ERVK -26 333 122 1 749 3567 15 0 0 chr17 21572753 21573149 -73699502 + MTA_Mm LTR MaLR 1 396 0 1 749 681 246 46 89 chr17 21573149 21573183 -73699468 - RLTR15 LTR ERVK -238 121 94 1 749 1865 211 84 101 chr17 21573183 21573805 -73698846 - RMER19C LTR ERVK 0 611 1 1 749 681 246 46 89 chr17 21573805 21573898 -73698753 - RLTR15 LTR ERVK -266 93 1 1 749 351 281 27 81 chr17 21574265 21574453 -73698198 - Lx7 LINE L1 -1885 5811 5635 1 749 1127 186 144 167 chr17 21574453 21574639 -73698012 - RMER6B LTR ERVK 0 461 298 1 749 1187 35 0 20 chr17 21574639 21574787 -73697864 - B1_Mus2 SINE Alu -2 145 1 1 749 1127 186 144 167 chr17 21574787 21575072 -73697579 - RMER6B LTR ERVK -164 297 1 1 749 351 281 27 81 chr17 21575072 21575104 -73697547 - Lx7 LINE L1 -2062 5634 5603 1 749 545 295 72 69 chr17 21575213 21575475 -73697176 + RMER15 LTR ERVL 28 290 -285 1 749 332 39 0 88 chr17 21575509 21575566 -73697085 - B1_Mus2 SINE Alu -1 146 95 1 749 4114 155 55 68 chr17 21575562 21576191 -73696460 - RMER19B LTR ERVK -25 877 249 1 749 1550 23 6 0 chr17 21576191 21576368 -73696283 + B2_Mm1a SINE B2 2 179 -14 1 749 4114 155 55 68 chr17 21576368 21576542 -73696109 - RMER19B LTR ERVK -654 248 85 1 749 483 259 80 34 chr17 21576546 21576722 -73695929 + RMER15 LTR ERVL 283 466 -109 1 749 645 260 89 11 chr17 21576726 21576905 -73695746 + B3 SINE B2 4 196 -20 1 749 328 287 16 50 chr17 21576900 21577021 -73695630 + RMER15 LTR ERVL 445 561 -14 1 749 212 179 0 0 chr17 21577318 21577357 -73695294 + T-rich Low_complexity Low_complexity 1 39 0 1 749 638 224 7 34 chr17 21577357 21577505 -73695146 - B1_Mur2 SINE Alu 0 149 6 1 749 264 355 63 14 chr17 21577377 21577520 -73695131 - B4 SINE B4 -66 226 77 1 749 502 191 14 7 chr17 21577526 21577668 -73694983 - Lx9 LINE L1 -8 7636 7494 1 749 450 53 0 0 chr17 21578160 21578217 -73694434 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 749 1278 204 29 7 chr17 21578220 21578496 -73694155 - Lx9 LINE L1 -179 7465 7184 1 749 1075 252 81 89 chr17 21578496 21579050 -73693601 + MT2B LTR ERVL 1 601 0 1 749 1953 221 21 48 chr17 21579050 21579336 -73693315 - Lx9 LINE L1 -456 7188 6906 1 749 4320 26 0 0 chr17 21579336 21579829 -73692822 + MT2_Mm LTR ERVL 1 493 0 1 749 1953 221 21 48 chr17 21579829 21579988 -73692663 - Lx9 LINE L1 -739 6905 6755 1 749 4379 115 40 9 chr17 21579988 21580679 -73691972 - RLTR19B LTR ERVK 0 715 3 1 749 1953 221 21 48 chr17 21580679 21580792 -73691859 - Lx9 LINE L1 -890 6754 6644 1 749 498 227 28 21 chr17 21580875 21581094 -73691557 + MMSAT4 Satellite Satellite 1 220 0 1 749 495 33 0 0 chr17 21581271 21581332 -73691319 + (TG)n Simple_repeat Simple_repeat 1 61 0 1 749 387 259 148 26 chr17 21581389 21581432 -73691219 - B3A SINE B2 -68 130 72 1 749 345 24 0 0 chr17 21581432 21581474 -73691177 + (TC)n Simple_repeat Simple_repeat 2 43 0 1 749 459 0 0 0 chr17 21581474 21581524 -73691127 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 749 387 259 148 26 chr17 21581524 21581594 -73691057 - B3A SINE B2 -127 71 3 1 749 385 329 36 0 chr17 21581646 21581786 -73690865 - Lx7 LINE L1 -1112 6361 6217 1 749 1210 74 0 0 chr17 21581957 21582105 -73690546 - B1_Mus1 SINE Alu 0 148 1 1 749 252 0 0 0 chr17 21582147 21582175 -73690476 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 749 578 249 43 11 chr17 21582502 21582708 -73689943 - Lx7 LINE L1 -503 5788 5567 1 749 785 283 98 44 chr17 21582812 21583219 -73689432 + RMER15 LTR ERVL 35 463 -112 1 749 779 287 26 5 chr17 21583219 21583408 -73689243 + B3 SINE B2 2 194 -22 1 749 490 265 88 0 chr17 21583402 21583538 -73689113 + RMER15 LTR ERVL 428 575 0 1 749 183 42 0 0 chr17 21583840 21583864 -73688787 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1 749 368 220 60 8 chr17 21583872 21584005 -73688646 - Lx9 LINE L1 0 7644 7505 1 749 266 109 43 0 chr17 21584086 21584132 -73688519 - Lx9 LINE L1 -993 6651 6604 1 749 458 234 46 46 chr17 21584132 21584262 -73688389 - B1_Mus2 SINE Alu -1 146 17 1 749 351 0 0 0 chr17 21584284 21584323 -73688328 + (TC)n Simple_repeat Simple_repeat 1 39 0 1 749 647 195 41 0 chr17 21584324 21584447 -73688204 - B1_Mur4 SINE Alu -15 135 8 1 749 1899 177 259 30 chr17 21584703 21585293 -73687358 - Lx3C LINE L1 -2 6974 6250 1 749 416 260 14 10 chr17 21585446 21585563 -73687088 + B1_Mur3 SINE Alu 1 120 0 1 749 875 194 16 21 chr17 21585657 21585847 -73686804 + B2_Mm2 SINE B2 1 189 -6 1 749 183 80 0 0 chr17 21585915 21585940 -73686711 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 1 749 268 348 44 6 chr17 21586269 21586428 -73686223 - Lx8 LINE L1 -337 7136 6972 1 749 228 67 0 0 chr17 21586531 21586561 -73686090 + (GGGA)n Simple_repeat Simple_repeat 4 33 0 1 749 258 32 0 0 chr17 21586567 21586598 -73686053 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 1 749 857 100 8 0 chr17 21586606 21586736 -73685915 + (GAAA)n Simple_repeat Simple_repeat 1 131 0 1 749 1363 179 4 46 chr17 21588031 21588312 -73684339 - Lx5 LINE L1 -41 7009 6741 1 749 455 266 18 0 chr17 21588392 21588501 -73684150 + B1_Mus1 SINE Alu 17 127 -21 1 749 225 94 0 0 chr17 21588692 21588724 -73683927 + (GTTTG)n Simple_repeat Simple_repeat 3 34 0 1 749 534 250 0 60 chr17 21588730 21588879 -73683772 - B1_Mur1 SINE Alu -1 148 9 1 749 341 133 168 25 chr17 21589859 21589970 -73682681 - B2_Mm2 SINE B2 -1 194 47 1 749 1011 95 27 0 chr17 21590021 21590169 -73682482 - B2_Mm1t SINE B2 -14 179 28 1 749 1282 109 10 10 chr17 21590177 21590371 -73682280 - B2_Mm2 SINE B2 0 195 2 1 749 3149 55 8 2 chr17 21591631 21592029 -73680622 - MTB LTR MaLR 0 400 1 1 749 1466 216 23 9 chr17 21592227 21592710 -73679941 - Lx9 LINE L1 -1615 6029 5502 1 749 213 151 25 99 chr17 21592716 21592797 -73679854 + T-rich Low_complexity Low_complexity 4 78 0 1 749 6108 165 47 11 chr17 21593980 21595118 -73677533 - Lx4B LINE L1 -4 7054 5876 1 749 1272 135 14 2 chr17 21595118 21595343 -73677308 - ORR1A3 LTR MaLR 0 329 94 1 749 8238 154 37 7 chr17 21595345 21596911 -73675740 - L1_Mur2 LINE L1 -393 5484 3872 1 749 3411 138 27 28 chr17 21596911 21597691 -73674960 - RLTR13D5 LTR ERVK 0 1023 25 1 749 3378 138 37 21 chr17 21597711 21598364 -73674287 - L1_Mur2 LINE L1 -2002 3875 3213 1 749 344 278 0 0 chr17 21598642 21598757 -73673894 + MurSatRep1 Unknown Unknown 631 745 -1392 1 749 654 208 20 21 chr17 21600717 21602408 -73670243 + MMSAT4 Satellite Satellite 1 1690 0 1 749 464 274 67 98 chr17 21602566 21602690 -73669961 - B3 SINE B2 -28 188 71 1 749 438 20 0 0 chr17 21602690 21602741 -73669910 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 749 464 274 67 98 chr17 21602741 21602810 -73669841 - B3 SINE B2 -146 70 1 1 749 545 221 107 0 chr17 21602860 21602991 -73669660 + B1_Mur2 SINE Alu 3 147 -2 1 749 1186 156 64 43 chr17 21603094 21603422 -73669229 - RMER17C LTR ERVK 0 410 76 1 749 1352 92 16 0 chr17 21603425 21603609 -73669042 - B2_Mm2 SINE B2 -8 187 1 1 749 8419 101 25 8 chr17 21603687 21604994 -73667657 - Lx2 LINE L1 -3 6994 5666 1 749 517 241 42 7 chr17 21605225 21605367 -73667284 + B1_Mur3 SINE Alu 3 149 0 1 749 1033 170 216 11 chr17 21605372 21605645 -73667006 + ORR1A2 LTR MaLR 1 329 0 1 749 2372 160 62 68 chr17 21605645 21605719 -73666932 + ORR1A2-int LTR MaLR 1 66 -1897 1 749 1200 48 0 7 chr17 21605719 21605867 -73666784 + B1_Mus2 SINE Alu 1 147 0 1 749 2372 160 62 68 chr17 21605867 21606323 -73666328 + ORR1A2-int LTR MaLR 67 528 -1435 1 749 1828 91 72 66 chr17 21606330 21606648 -73666003 + ORR1A2 LTR MaLR 8 327 0 1 749 3399 166 54 119 chr17 21606648 21607541 -73665110 + ORR1A2-int LTR MaLR 525 1359 -604 1 749 2161 107 6 6 chr17 21607544 21607865 -73664786 - ORR1A4 LTR MaLR -8 321 1 1 749 2217 159 74 7 chr17 21607866 21608331 -73664320 + ORR1A2-int LTR MaLR 1001 1772 -191 1 749 778 148 7 29 chr17 21609110 21609249 -73663402 - RMER17C LTR ERVK -274 136 1 1 749 367 268 12 0 chr17 21609427 21609509 -73663142 + B1_Mur3 SINE Alu 2 84 -65 1 749 235 344 44 19 chr17 21610030 21610190 -73662461 - Lx8 LINE L1 -338 7135 6972 1 749 661 109 0 35 chr17 21610888 21611002 -73661649 + MMERGLN-int LTR ERV1 309 418 -7138 1 749 345 88 219 24 chr17 21611076 21611158 -73661493 + MMVL30-int LTR ERV1 280 377 -2922 1 749 202 224 0 20 chr17 21611195 21611245 -73661406 + (TCTG)n Simple_repeat Simple_repeat 3 51 0 1 749 5110 60 0 7 chr17 21611506 21612193 -73660458 + MMVL30-int LTR ERV1 772 1453 -2245 1 749 17968 47 12 9 chr17 21612280 21614719 -73657932 + MMVL30-int LTR ERV1 960 3698 0 1 749 853 136 6 99 chr17 21614719 21614891 -73657760 + RLTR6_Mm LTR ERV1 1 156 -498 1 749 486 195 211 51 chr17 21614904 21615179 -73657472 + RLTR6_Mm LTR ERV1 276 594 -60 1 749 1164 58 47 6 chr17 21615163 21615373 -73657278 - RLTR1B LTR ERV1 -222 290 1 1 749 557 236 47 0 chr17 21615500 21615627 -73657024 + B1_Mur2 SINE Alu 4 136 -13 1 749 394 314 40 0 chr17 21615756 21615880 -73656771 + B1_Mur4 SINE Alu 1 129 -21 1 749 22 0 0 0 chr17 21617375 21617397 -73655254 + AT_rich Low_complexity Low_complexity 1 22 0 1 749 22 0 0 0 chr17 21617690 21617712 -73654939 + AT_rich Low_complexity Low_complexity 1 22 0 1 749 411 38 0 0 chr17 21617822 21617875 -73654776 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 749 180 0 0 0 chr17 21617989 21618009 -73654642 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 749 408 40 0 0 chr17 21618009 21618059 -73654592 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 749 2259 62 119 3 chr17 21618175 21618485 -73654166 - ORR1A1 LTR MaLR 0 346 1 1 749 432 37 0 0 chr17 21619146 21619200 -73653451 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 749 1525 238 122 34 chr17 21619350 21620051 -73652600 - RMER17B LTR ERVK -169 789 1 1 749 2675 232 143 68 chr17 21620315 21620739 -73651912 - Lx9 LINE L1 -166 7478 6955 1 749 1112 101 0 0 chr17 21620739 21620887 -73651764 + B1_Mus1 SINE Alu 1 148 0 1 749 2675 232 143 68 chr17 21620887 21621477 -73651174 - Lx9 LINE L1 -690 6954 6388 1 749 265 93 116 0 chr17 21621477 21621520 -73651131 - B2_Mm2 SINE B2 -144 51 4 1 749 1088 205 17 0 chr17 21621598 21621837 -73650814 - MYSERV16_I-int LTR ERVK -498 1828 1586 1 749 505 190 10 0 chr17 21621845 21621945 -73650706 - Lx9 LINE L1 -442 7202 7102 1 749 370 285 32 0 chr17 21621983 21622106 -73650545 - B1_Mur2 SINE Alu -5 144 18 1 749 798 196 0 0 chr17 21622162 21622300 -73650351 - B1_Mur4 SINE Alu -12 138 1 2 749 230 254 0 0 chr17 21622386 21622445 -73650206 + L1_Rod LINE L1 3333 3391 -2456 2 749 372 222 0 0 chr17 21622667 21622739 -73649912 + PB1D9 SINE Alu 1 72 -48 2 749 216 97 0 0 chr17 21622887 21622918 -73649733 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 2 749 426 96 0 0 chr17 21622977 21623050 -73649601 + (TG)n Simple_repeat Simple_repeat 1 73 0 2 749 2355 228 69 10 chr17 21623468 21624080 -73648571 - Lx6 LINE L1 -286 7174 6527 2 749 285 75 0 0 chr17 21624921 21624961 -73647690 + (TC)n Simple_repeat Simple_repeat 1 40 0 2 749 284 203 31 0 chr17 21625397 21625461 -73647190 - Lx9 LINE L1 -929 6715 6650 2 93 770 204 0 7 chr17 21626788 21626931 -73645720 + B1_Mur2 SINE Alu 2 143 -6 2 750 204 148 16 32 chr17 21626965 21627028 -73645623 + GA-rich Low_complexity Low_complexity 1 62 0 2 750 677 168 52 22 chr17 21627158 21627292 -73645359 + B1_Mus2 SINE Alu 9 146 -1 2 750 413 270 0 29 chr17 21627457 21627560 -73645091 - B1_Mur2 SINE Alu -40 109 10 2 750 799 215 0 0 chr17 21628992 21629141 -73643510 + B1_Mur4 SINE Alu 2 150 0 2 750 378 171 0 0 chr17 21629142 21629212 -73643439 + (TA)n Simple_repeat Simple_repeat 2 71 0 2 750 243 303 0 0 chr17 21629802 21629878 -73642773 - L1MD LINE L1 -1178 4968 4893 2 750 306 195 86 79 chr17 21630203 21630342 -73642309 - Lx4B LINE L1 -4 7054 6915 2 750 1684 151 0 141 chr17 21630342 21630646 -73642005 + ORR1A2 LTR MaLR 3 285 -41 2 750 1152 77 0 0 chr17 21630646 21630789 -73641862 + B1_Mus1 SINE Alu 1 143 -5 2 750 1684 151 0 141 chr17 21630789 21630861 -73641790 + ORR1A2 LTR MaLR 286 326 0 2 750 9883 134 60 85 chr17 21630861 21631952 -73640699 + ORR1A2-int LTR MaLR 1 1040 -923 2 750 1242 41 0 0 chr17 21631952 21632098 -73640553 + B1_Mm SINE Alu 1 146 -1 2 750 9883 134 60 85 chr17 21632098 21633020 -73639631 + ORR1A2-int LTR MaLR 1041 1963 0 2 750 2081 127 6 0 chr17 21633020 21633334 -73639317 + ORR1A2 LTR MaLR 11 326 -1 2 750 808 169 0 0 chr17 21633334 21633476 -73639175 - L1_Mur2 LINE L1 -1030 4847 4706 2 750 2586 69 20 2 chr17 21633501 21634039 -73638612 + L1VL4 LINE L1 588 1138 -2421 2 750 3714 131 12 92 chr17 21634042 21634855 -73637796 - RMER17A LTR ERVK -3 748 1 2 750 2974 67 2 0 chr17 21634855 21635271 -73637380 + L1VL4 LINE L1 1133 1549 -2010 2 750 385 283 19 9 chr17 21635396 21635503 -73637148 - B3 SINE B2 -101 115 8 2 750 1072 278 103 13 chr17 21635529 21635985 -73636666 - Lx9 LINE L1 -957 6687 6191 2 750 1206 212 86 10 chr17 21636039 21636471 -73636180 - Lx9 LINE L1 -1616 6028 5554 2 750 1347 90 16 0 chr17 21636788 21636976 -73635675 - B2_Mm1t SINE B2 -1 192 2 2 750 2012 264 131 95 chr17 21637735 21637968 -73634683 + RMER19C LTR ERVK 2 302 -600 2 750 1086 97 0 0 chr17 21637968 21638112 -73634539 + B1_Mus1 SINE Alu 1 144 -4 2 750 360 0 0 0 chr17 21638113 21638153 -73634498 + (TAA)n Simple_repeat Simple_repeat 3 42 0 2 750 2012 212 12 171 chr17 21638153 21638735 -73633916 + RMER19C LTR ERVK 133 611 0 2 750 653 291 101 27 chr17 21638747 21639098 -73633553 - L1MA6 LINE L1 -364 5936 5563 2 750 186 43 0 0 chr17 21639098 21639121 -73633530 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 750 653 291 101 27 chr17 21639121 21639402 -73633249 - L1MA6 LINE L1 -738 5562 5259 2 750 563 120 144 0 chr17 21639416 21639541 -73633110 + BC1_Mm scRNA scRNA 2 144 -8 2 750 334 314 104 17 chr17 21639550 21639995 -73632656 - L1MA6 LINE L1 -913 5230 4734 2 750 687 92 7 144 chr17 21640298 21640451 -73632200 - L1_Mus2 LINE L1 0 6566 6435 2 750 369 62 0 0 chr17 21640732 21640780 -73631871 + (T)n Simple_repeat Simple_repeat 1 48 0 2 750 183 80 0 0 chr17 21641158 21641183 -73631468 + (A)n Simple_repeat Simple_repeat 1 25 0 2 750 837 149 71 44 chr17 21641580 21641762 -73630889 + B2_Mm2 SINE B2 3 189 -6 2 750 303 302 0 0 chr17 21641951 21642077 -73630574 + MurSatRep1 Unknown Unknown 620 745 -1392 2 750 2653 215 178 11 chr17 21642240 21642982 -73629669 + RMER1B Other Other 45 910 -156 2 750 21 0 0 0 chr17 21643091 21643112 -73629539 + AT_rich Low_complexity Low_complexity 1 21 0 2 750 386 178 168 0 chr17 21643115 21643222 -73629429 + RMER1B Other Other 940 1064 -2 2 750 960 68 106 0 chr17 21644362 21644494 -73628157 + B1_Mus2 SINE Alu 2 147 0 2 750 546 249 11 11 chr17 21645403 21645705 -73626946 + MMSAT4 Satellite Satellite 1 302 0 2 750 646 207 12 12 chr17 21645726 21646602 -73626049 + MMSAT4 Satellite Satellite 1 876 -1 2 750 28 29 0 0 chr17 21646719 21646754 -73625897 + AT_rich Low_complexity Low_complexity 1 35 0 2 750 805 264 19 5 chr17 21646794 21647007 -73625644 - B3 SINE B2 0 216 1 2 750 638 246 42 0 chr17 21647060 21647202 -73625449 + B1_Mur2 SINE Alu 2 149 0 2 750 234 348 82 11 chr17 21647599 21647709 -73624942 + B1_Mur2 SINE Alu 5 124 -25 2 750 700 284 59 23 chr17 21647713 21648019 -73624632 - Lx8 LINE L1 -930 6543 6227 2 750 600 283 22 19 chr17 21648482 21648801 -73623850 - Lx8 LINE L1 -1545 5928 5596 2 750 949 283 74 78 chr17 21648904 21649352 -73623299 + RMER15 LTR ERVL 22 467 -108 2 750 885 255 26 10 chr17 21649360 21649554 -73623097 + B3 SINE B2 9 205 -11 2 750 491 237 42 0 chr17 21649548 21649666 -73622985 + RMER15 LTR ERVL 448 570 -5 2 750 234 169 33 17 chr17 21649890 21649950 -73622701 + T-rich Low_complexity Low_complexity 6 66 0 2 750 3911 228 29 16 chr17 21649959 21650978 -73621673 - Lx9 LINE L1 -8 7636 6604 2 750 471 246 53 8 chr17 21650987 21651118 -73621533 - B1_Mur1 SINE Alu -8 141 5 2 750 435 168 104 47 chr17 21651158 21651264 -73621387 - PB1D9 SINE Alu -3 117 6 2 750 240 238 11 101 chr17 21651184 21651273 -73621378 - MT2B2 LTR ERVL -343 241 161 2 750 2817 19 22 0 chr17 21651468 21651788 -73620863 - IAPLTR2b LTR ERVK 0 327 1 2 750 316 328 116 12 chr17 21652525 21652784 -73619867 - Lx8 LINE L1 -338 7135 6850 2 750 602 226 75 82 chr17 21653115 21653370 -73619281 - Lx4B LINE L1 -1 7057 6805 2 750 221 0 35 0 chr17 21654958 21654987 -73617664 + (TATAA)n Simple_repeat Simple_repeat 5 34 0 2 750 231 283 21 21 chr17 21655171 21655265 -73617386 - L1M2 LINE L1 -1159 4984 4891 2 750 260 244 59 34 chr17 21655543 21655662 -73616989 - L1M2 LINE L1 -1629 4514 4393 2 750 339 149 227 11 chr17 21655968 21656056 -73616595 - Lx LINE L1 -166 7478 7372 2 750 2511 126 28 46 chr17 21656069 21656501 -73616150 - Lx LINE L1 -10 6644 6221 2 750 20374 20 0 0 chr17 21656501 21659467 -73613184 - L1Md_A LINE L1 -189 6393 3428 2 750 819 119 0 0 chr17 21659650 21659776 -73612875 + (TCC)n Simple_repeat Simple_repeat 2 127 0 2 750 189 263 0 0 chr17 21659935 21659973 -73612678 + MIR SINE MIR 3 40 -222 2 750 3539 48 0 42 chr17 21660014 21660491 -73612160 - L1Md_F2 LINE L1 -3 6579 6123 2 750 1356 94 0 0 chr17 21660635 21660667 -73611984 - B2_Mm1t SINE B2 0 193 162 2 750 315 0 0 0 chr17 21660667 21660702 -73611949 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 2 750 1356 94 0 0 chr17 21660702 21660861 -73611790 - B2_Mm1t SINE B2 -32 161 3 2 750 725 311 65 64 chr17 21660994 21661345 -73611306 - L1M2 LINE L1 -53 5794 5461 2 750 4638 76 21 29 chr17 21661345 21662006 -73610645 - L1_Mus3 LINE L1 0 6638 5983 2 750 884 311 65 19 chr17 21662006 21662762 -73609889 - L1M2 LINE L1 -393 5487 4704 2 750 1452 68 11 0 chr17 21663742 21663932 -73608719 + B2_Mm1t SINE B2 1 192 -1 2 750 363 295 0 0 chr17 21664897 21665036 -73607615 + MurSatRep1 Unknown Unknown 607 745 -1392 2 750 1103 103 19 0 chr17 21665918 21666073 -73606578 - B2_Mm2 SINE B2 -37 158 1 2 750 234 0 0 0 chr17 21666391 21666417 -73606234 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2 750 1179 69 0 0 chr17 21666418 21666563 -73606088 + B1_Mus2 SINE Alu 3 147 0 2 750 200 79 0 50 chr17 21666581 21666621 -73606030 + (CAAAAA)n Simple_repeat Simple_repeat 3 40 0 2 750 23 0 0 0 chr17 21666680 21666703 -73605948 + AT_rich Low_complexity Low_complexity 1 23 0 2 750 1212 48 0 0 chr17 21666703 21666850 -73605801 - B1_Mus2 SINE Alu 0 147 1 2 750 286 172 0 0 chr17 21667684 21667742 -73604909 + MMSAT4 Satellite Satellite 31 88 -80 2 750 250 306 68 21 chr17 21670300 21670490 -73602161 + L1M2 LINE L1 3375 3573 -2570 2 750 404 287 11 0 chr17 21670575 21670669 -73601982 + B1_Mur3 SINE Alu 1 95 -54 2 750 198 0 0 0 chr17 21670671 21670693 -73601958 + (A)n Simple_repeat Simple_repeat 1 22 0 2 750 468 0 0 0 chr17 21671442 21671494 -73601157 + (GA)n Simple_repeat Simple_repeat 2 53 0 2 750 2476 162 63 21 chr17 21671622 21672101 -73600550 + RLTR19 LTR ERVK 1 499 0 2 750 214 213 0 41 chr17 21672855 21672904 -73599747 + G-rich Low_complexity Low_complexity 2 48 0 2 750 490 182 81 9 chr17 21673446 21673557 -73599094 + PB1D9 SINE Alu 2 120 0 2 750 26 30 0 0 chr17 21673558 21673591 -73599060 + AT_rich Low_complexity Low_complexity 1 33 0 2 750 207 170 0 0 chr17 21673612 21673659 -73598992 + GA-rich Low_complexity Low_complexity 2 48 0 2 750 2405 143 61 52 chr17 21673695 21674190 -73598461 + RLTR19 LTR ERVK 1 499 0 2 750 1420 58 26 10 chr17 21674201 21674393 -73598258 - B2_Mm2 SINE B2 0 195 1 2 750 800 178 15 0 chr17 21674496 21674631 -73598020 + B1_Mur4 SINE Alu 1 137 -13 2 750 442 266 0 0 chr17 21674817 21674911 -73597740 - B1_Mur2 SINE Alu -46 103 10 2 750 24 32 0 0 chr17 21675919 21675950 -73596701 + AT_rich Low_complexity Low_complexity 1 31 0 2 750 687 191 92 0 chr17 21676600 21676731 -73595920 + B1_Mur4 SINE Alu 2 144 -6 2 750 2968 143 35 16 chr17 21676755 21677245 -73595406 + RLTR19 LTR ERVK 1 499 0 2 750 2326 194 19 227 chr17 21677294 21678411 -73594240 - RLTR21 LTR ERVK 0 1572 689 2 750 22 0 0 0 chr17 21678411 21678433 -73594218 + AT_rich Low_complexity Low_complexity 1 22 0 2 750 8880 98 17 6 chr17 21678435 21680337 -73592314 - Lx3A LINE L1 -8 6973 5061 2 750 389 103 29 14 chr17 21680337 21680406 -73592245 + RLTR22_Mur LTR ERVK 92 161 -1687 2 750 242 196 0 89 chr17 21680764 21680820 -73591831 - B1F SINE Alu -85 64 14 2 750 1174 78 72 0 chr17 21680986 21681152 -73591499 + B2_Mm1t SINE B2 2 179 -14 2 750 252 62 107 0 chr17 21681166 21681229 -73591422 + B2_Mm2 SINE B2 127 195 0 2 750 198 0 0 0 chr17 21681574 21681596 -73591055 + (T)n Simple_repeat Simple_repeat 1 22 0 2 750 36297 30 1 0 chr17 21681653 21688676 -73583975 - L1Md_T LINE L1 0 6585 1 2 750 6512 159 107 32 chr17 21688676 21689809 -73582842 + RLTR22_Mur LTR ERVK 134 1364 -484 2 750 1342 87 0 16 chr17 21689809 21689997 -73582654 + B2_Mm2 SINE B2 1 185 -10 3 750 6512 171 98 43 chr17 21689997 21690375 -73582276 + RLTR22_Mur LTR ERVK 1072 1667 -181 2 750 328 295 0 64 chr17 21690400 21690494 -73582157 + RLTR22_Mur LTR ERVK 1235 1322 0 2 750 376 260 0 40 chr17 21690498 21690598 -73582053 - Lx9 LINE L1 -1230 6414 6319 3 750 1387 221 50 18 chr17 21690649 21691184 -73581467 - Lx9 LINE L1 -1531 6113 5526 3 750 1556 32 11 5 chr17 21691185 21691372 -73581279 - B2_Mm1a SINE B2 -5 188 1 3 750 311 312 20 34 chr17 21691678 21691824 -73580827 - L1MEg LINE L1 -4635 1449 1306 3 750 1922 184 79 34 chr17 21693108 21693637 -73579014 - RLTR31_Mur LTR ERVK 0 553 1 3 750 211 188 0 59 chr17 21693786 21693819 -73578832 + T-rich Low_complexity Low_complexity 32 64 0 3 750 1153 82 0 0 chr17 21693819 21693966 -73578685 - B1_Mus2 SINE Alu 0 147 1 3 750 211 188 0 59 chr17 21693966 21694000 -73578651 + T-rich Low_complexity Low_complexity 1 31 0 3 750 273 322 0 0 chr17 21694116 21694231 -73578420 + MurSatRep1 Unknown Unknown 631 745 -1392 3 750 1980 216 37 21 chr17 21694393 21695128 -73577523 + RMER1B Other Other 41 908 -158 3 750 530 233 0 14 chr17 21695283 21695431 -73577220 + RMER1B Other Other 921 1066 0 3 750 1157 93 20 99 chr17 21695588 21695790 -73576861 - B2_Mm2 SINE B2 -9 186 1 3 750 674 212 18 18 chr17 21697452 21699027 -73573624 + MMSAT4 Satellite Satellite 1 1575 -5 3 750 874 252 24 5 chr17 21699196 21699407 -73573244 - B3 SINE B2 0 216 2 3 750 212 351 17 43 chr17 21699439 21699467 -73573184 + ID SINE ID 60 84 -140 3 750 370 229 109 45 chr17 21699467 21699577 -73573074 + PB1D9 SINE Alu 4 120 0 3 750 309 152 24 37 chr17 21699680 21699762 -73572889 + CT-rich Low_complexity Low_complexity 4 84 0 3 750 446 275 0 7 chr17 21700053 21700203 -73572448 - Lx9 LINE L1 -8 7636 7488 3 750 1339 274 49 68 chr17 21700213 21700699 -73571952 - RLTR19 LTR ERVK 0 499 23 3 750 3671 197 38 15 chr17 21700745 21701624 -73571027 - Lx9 LINE L1 -142 7502 6604 3 750 468 254 28 14 chr17 21701626 21701770 -73570881 - B1_Mur3 SINE Alu -3 146 1 3 750 478 171 127 45 chr17 21701809 21701919 -73570732 - PB1D9 SINE Alu -1 119 1 3 750 21 0 0 0 chr17 21702077 21702098 -73570553 + AT_rich Low_complexity Low_complexity 1 21 0 3 750 327 247 15 78 chr17 21702288 21702450 -73570201 + PB1D9 SINE Alu 1 147 -2 3 750 323 23 0 22 chr17 21702476 21702521 -73570130 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 3 750 1102 77 0 0 chr17 21702521 21702659 -73569992 - B1_Mm SINE Alu -4 143 6 3 750 284 346 31 6 chr17 21703037 21703197 -73569454 - Lx8 LINE L1 -338 7135 6972 3 750 216 0 0 0 chr17 21703250 21703274 -73569377 + (T)n Simple_repeat Simple_repeat 1 24 0 3 750 189 0 0 0 chr17 21704364 21704385 -73568266 + (T)n Simple_repeat Simple_repeat 1 21 0 3 750 1238 209 56 33 chr17 21704694 21704996 -73567655 - Lx5 LINE L1 -1 7049 6741 3 750 405 296 48 8 chr17 21705012 21705138 -73567513 + B1_Mus1 SINE Alu 5 135 -13 3 750 492 272 7 35 chr17 21705320 21705461 -73567190 - B1_Mur1 SINE Alu 0 149 13 3 750 300 322 8 33 chr17 21705365 21705487 -73567164 - ID_B1 SINE B4 -37 187 69 3 750 267 271 39 0 chr17 21707284 21707413 -73565238 - L1M2 LINE L1 -874 5426 5293 3 750 240 290 127 16 chr17 21707603 21707729 -73564922 - L1M2 LINE L1 -1113 5030 4891 3 750 357 280 73 41 chr17 21707906 21708029 -73564622 - B3A SINE B2 -70 128 2 3 750 23 0 0 0 chr17 21708130 21708153 -73564498 + AT_rich Low_complexity Low_complexity 1 23 0 3 750 633 188 239 34 chr17 21708182 21708391 -73564260 - Lx9 LINE L1 -166 7478 7227 3 750 1095 135 31 0 chr17 21708454 21708646 -73564005 - Lx LINE L1 -5 6649 6452 3 750 27 29 0 0 chr17 21708734 21708768 -73563883 + AT_rich Low_complexity Low_complexity 1 34 0 3 750 4071 228 109 34 chr17 21708801 21710258 -73562393 - Lx9 LINE L1 -516 7128 5498 3 750 258 81 0 0 chr17 21710767 21710804 -73561847 + (T)n Simple_repeat Simple_repeat 1 37 0 3 750 370 224 9 9 chr17 21711140 21711248 -73561403 + MMSAT4 Satellite Satellite 61 168 0 3 750 312 27 0 0 chr17 21711475 21711512 -73561139 + (TC)n Simple_repeat Simple_repeat 1 37 0 3 750 288 0 0 0 chr17 21711512 21711544 -73561107 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 750 737 288 20 30 chr17 21711545 21711742 -73560909 - B3 SINE B2 -21 195 1 3 750 353 231 198 33 chr17 21711797 21711918 -73560733 + B1_Mur2 SINE Alu 3 143 -6 3 750 595 250 21 0 chr17 21712307 21712451 -73560200 + B1_Mur3 SINE Alu 3 149 0 3 750 554 338 74 15 chr17 21712660 21712999 -73559652 - Lx8 LINE L1 -553 6920 6562 3 750 475 303 67 0 chr17 21713037 21713232 -73559419 - Lx8 LINE L1 -1055 6418 6211 3 750 353 289 19 90 chr17 21713697 21713994 -73558657 - Lx8 LINE L1 -1565 5908 5615 3 750 912 268 120 73 chr17 21714157 21714576 -73558075 + RMER15 LTR ERVL 35 473 -102 3 750 613 311 32 11 chr17 21714576 21714761 -73557890 + B3 SINE B2 2 190 -26 3 750 400 306 33 0 chr17 21714769 21714890 -73557761 + RMER15 LTR ERVL 448 572 -3 3 750 1178 75 0 0 chr17 21715021 21715168 -73557483 - B1_Mus1 SINE Alu 0 148 2 3 750 625 134 27 0 chr17 21715188 21715300 -73557351 + B2_Mm2 SINE B2 78 192 -3 3 750 223 286 29 0 chr17 21715420 21715490 -73557161 + (TATG)n Simple_repeat Simple_repeat 1 72 0 3 750 2329 167 11 53 chr17 21715584 21716057 -73556594 + RLTR1D LTR ERV1 145 605 0 3 750 690 62 0 0 chr17 21716478 21716574 -73556077 + (GA)n Simple_repeat Simple_repeat 1 96 0 3 750 631 257 14 0 chr17 21717942 21718082 -73554569 + B1_Mur2 SINE Alu 1 142 -7 3 750 292 127 15 31 chr17 21718124 21718189 -73554462 + GA-rich Low_complexity Low_complexity 1 64 0 3 750 744 201 37 0 chr17 21718309 21718443 -73554208 + B1_Mus2 SINE Alu 9 147 0 3 750 397 276 0 31 chr17 21718631 21718728 -73553923 - B1_Mur2 SINE Alu -46 103 10 3 750 252 309 41 0 chr17 21718790 21718887 -73553764 - Lx9 LINE L1 -1238 6406 6306 3 750 1047 265 37 46 chr17 21719043 21719495 -73553156 - Lx9 LINE L1 -1674 5970 5491 3 750 21 0 0 0 chr17 21720181 21720202 -73552449 + AT_rich Low_complexity Low_complexity 1 21 0 3 750 184 235 78 0 chr17 21720975 21721026 -73551625 - L3 LINE CR1 -667 3822 3768 3 750 444 161 0 0 chr17 21721044 21721125 -73551526 + (TCTCTG)n Simple_repeat Simple_repeat 2 82 0 3 750 23 0 0 0 chr17 21721617 21721640 -73551011 + AT_rich Low_complexity Low_complexity 1 23 0 3 750 247 322 0 0 chr17 21721764 21721879 -73550772 + MurSatRep1 Unknown Unknown 631 745 -1392 3 750 2512 253 162 14 chr17 21722029 21722899 -73549752 + RMER1B Other Other 47 1045 -21 3 750 485 240 12 12 chr17 21724207 21724487 -73548164 + MMSAT4 Satellite Satellite 1 280 0 3 750 659 210 17 17 chr17 21724541 21725431 -73547220 + MMSAT4 Satellite Satellite 1 890 -1 3 750 862 45 0 0 chr17 21725911 21726022 -73546629 + B1_Mm SINE Alu 37 147 0 3 750 225 0 0 0 chr17 21726022 21726047 -73546604 + (A)n Simple_repeat Simple_repeat 1 25 0 3 750 210 277 106 15 chr17 21727128 21727194 -73545457 + L2 LINE L2 98 169 -3250 3 750 33 0 0 0 chr17 21727408 21727441 -73545210 + AT_rich Low_complexity Low_complexity 1 33 0 3 750 261 0 0 0 chr17 21728148 21728177 -73544474 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 750 244 319 11 0 chr17 21728673 21728767 -73543884 - L1M2 LINE L1 -1158 4985 4891 3 750 413 292 126 31 chr17 21728911 21729070 -73543581 - B3A SINE B2 -21 174 1 3 750 21 0 0 0 chr17 21729171 21729192 -73543459 + AT_rich Low_complexity Low_complexity 1 21 0 3 750 750 118 179 7 chr17 21729221 21729366 -73543285 - B2_Mm2 SINE B2 -3 192 23 3 750 4501 234 102 56 chr17 21729418 21731164 -73541487 - Lx9 LINE L1 -221 7423 5529 3 750 327 323 23 8 chr17 21731423 21731551 -73541100 - L1MEg LINE L1 -4649 1435 1306 3 750 903 65 65 0 chr17 21731990 21732128 -73540523 - L1Md_F2 LINE L1 -8 6574 6428 3 750 1033 324 61 40 chr17 21732362 21732444 -73540207 - L1_Mur3 LINE L1 -35 5845 5762 3 750 333 68 0 0 chr17 21732444 21732488 -73540163 + (TA)n Simple_repeat Simple_repeat 1 44 0 3 750 1033 324 61 40 chr17 21732488 21732726 -73539925 - L1_Mur3 LINE L1 -119 5761 5503 3 750 369 0 0 0 chr17 21732726 21732767 -73539884 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 750 1033 325 57 39 chr17 21732767 21733577 -73539074 - L1_Mur3 LINE L1 -378 5502 4733 3 750 5739 151 30 0 chr17 21734050 21735107 -73537544 + L1_Mur2 LINE L1 2058 3146 -2740 3 750 35593 10 0 29 chr17 21735108 21740416 -73532235 + L1Md_A LINE L1 440 5586 -297 3 750 8879 10 0 1 chr17 21740416 21741413 -73531238 + L1Md_A LINE L1 5587 6582 0 3 750 8623 142 31 30 chr17 21741414 21743148 -73529503 + L1_Mur2 LINE L1 3124 4859 -1018 3 750 2241 150 67 11 chr17 21744011 21744488 -73528163 + Lx3C LINE L1 5843 6346 -630 3 750 261 226 0 0 chr17 21744535 21744597 -73528054 + MMSAT4 Satellite Satellite 30 91 -77 3 750 284 270 59 20 chr17 21744790 21744892 -73527759 + PB1D9 SINE Alu 5 110 -10 3 750 293 0 0 26 chr17 21744892 21744930 -73527721 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 3 750 933 285 55 14 chr17 21745108 21745453 -73527198 - Lx8 LINE L1 -553 6920 6562 3 750 555 228 75 112 chr17 21745457 21745613 -73527038 - RLTR21 LTR ERVK 0 1404 1255 3 750 303 28 0 0 chr17 21745613 21745649 -73527002 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 750 793 188 95 84 chr17 21745649 21745922 -73526729 - RLTR21 LTR ERVK -478 1094 817 3 750 216 0 0 0 chr17 21745922 21745946 -73526705 + (TA)n Simple_repeat Simple_repeat 1 24 0 3 750 259 36 0 68 chr17 21746053 21746112 -73526539 - L1Md_F2 LINE L1 0 6582 6528 3 750 1783 138 31 11 chr17 21746609 21747060 -73525591 - L1Md_F2 LINE L1 -186 6396 6176 3 750 14189 113 32 12 chr17 21747053 21749468 -73523183 - L1_Mur2 LINE L1 -392 5485 3024 3 750 4047 127 45 3 chr17 21749494 21750315 -73522336 - L1_Mur2 LINE L1 -4447 1430 583 3 750 702 224 0 0 chr17 21750318 21750452 -73522199 - L1Md_F2 LINE L1 -824 6820 6687 3 750 553 166 172 40 chr17 21750452 21750603 -73522048 - RLTR9A LTR ERVK 0 368 198 3 750 1016 92 18 8 chr17 21751565 21751738 -73520913 - RLTR9A LTR ERVK -214 169 1 3 750 351 232 12 0 chr17 21751742 21751824 -73520827 - L1Md_F2 LINE L1 -956 6688 6606 3 750 408 258 11 0 chr17 21751824 21751917 -73520734 - B1_Mus2 SINE Alu -47 100 7 3 750 1643 128 179 67 chr17 21752208 21752610 -73520041 + LTRIS5 LTR ERV1 1 447 0 3 750 2526 164 280 14 chr17 21752793 21753375 -73519276 + RMER19A LTR ERVK 1 737 0 3 750 2449 141 47 42 chr17 21753574 21753903 -73518748 + RLTR19 LTR ERVK 1 313 -186 3 750 372 22 0 0 chr17 21753903 21753948 -73518703 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 750 2449 141 47 42 chr17 21753948 21754070 -73518581 + RLTR19 LTR ERVK 314 453 -46 3 750 186 43 0 0 chr17 21755286 21755309 -73517342 + (T)n Simple_repeat Simple_repeat 1 23 0 3 750 906 107 0 54 chr17 21755309 21755457 -73517194 - B1_Mus1 SINE Alu 0 148 9 3 750 719 204 44 0 chr17 21755517 21755654 -73516997 + B1_Mur2 SINE Alu 1 143 -6 3 750 620 87 11 0 chr17 21755690 21755782 -73516869 + (GGAAA)n Simple_repeat Simple_repeat 5 97 0 4 750 1214 112 32 0 chr17 21755801 21755988 -73516663 - B2_Mm2 SINE B2 -1 194 2 4 750 590 184 6 156 chr17 21756094 21756175 -73516476 + B1_Mus2 SINE Alu 1 64 -83 4 750 1226 68 11 6 chr17 21756175 21756353 -73516298 - L1_Mus3 LINE L1 0 6638 6460 4 750 590 184 6 156 chr17 21756353 21756438 -73516213 + B1_Mus2 SINE Alu 65 142 -5 4 750 513 47 0 0 chr17 21756456 21756520 -73516131 + (GA)n Simple_repeat Simple_repeat 1 64 0 4 750 369 309 0 21 chr17 21756660 21756756 -73515895 - B1_Mur4 SINE Alu -46 104 11 4 750 1287 226 67 113 chr17 21757401 21757774 -73514877 - RLTR21 LTR ERVK -33 1539 1180 4 750 225 0 0 0 chr17 21757774 21757799 -73514852 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 93 1287 220 53 126 chr17 21757799 21758006 -73514645 - RLTR21 LTR ERVK -143 1261 1058 4 751 294 229 0 0 chr17 21758011 21758081 -73514570 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 4 751 1923 120 56 64 chr17 21760662 21761037 -73511614 + RLTR19B LTR ERVK 344 715 0 4 751 2390 158 113 27 chr17 21761037 21761552 -73511099 + RLTR19-int LTR ERVK 1 559 -5578 4 751 3364 91 0 10 chr17 21761653 21762183 -73510468 - Lx4A LINE L1 -989 6069 5539 4 751 2792 124 21 19 chr17 21762193 21762678 -73509973 + RLTR19-int LTR ERVK 2293 2778 -3359 4 751 696 198 0 16 chr17 21762698 21762826 -73509825 - RLTR21 LTR ERVK -1446 126 1 4 751 1888 67 41 4 chr17 21762913 21763182 -73509469 + MusHAL1 LINE L1 2254 2532 -180 4 751 7414 68 3 1 chr17 21763178 21764514 -73508137 + L1_Mus1 LINE L1 5229 6567 0 4 751 1373 30 15 10 chr17 21764524 21764727 -73507924 + MusHAL1 LINE L1 2509 2712 0 4 751 22 0 0 0 chr17 21764918 21764940 -73507711 + AT_rich Low_complexity Low_complexity 1 22 0 4 751 594 242 118 5 chr17 21765527 21765722 -73506929 - L1_Rod LINE L1 -106 5741 5525 4 751 27 29 0 0 chr17 21766368 21766402 -73506249 + AT_rich Low_complexity Low_complexity 1 34 0 4 751 234 0 0 0 chr17 21766894 21766920 -73505731 + (T)n Simple_repeat Simple_repeat 1 26 0 4 751 343 255 0 0 chr17 21767846 21767944 -73504707 + MurSatRep1 Unknown Unknown 631 728 -1409 4 751 1571 249 224 15 chr17 21768129 21768724 -73503927 + RMER1B Other Other 41 759 -307 4 751 615 27 0 0 chr17 21769230 21769303 -73503348 + (TTTA)n Simple_repeat Simple_repeat 4 76 0 4 751 524 227 29 29 chr17 21770183 21770478 -73502173 + MMSAT4 Satellite Satellite 1 295 0 4 751 671 211 30 20 chr17 21770521 21772126 -73500525 + MMSAT4 Satellite Satellite 1 1620 0 4 751 728 280 34 64 chr17 21772288 21772462 -73500189 - B3 SINE B2 0 193 35 4 751 240 35 0 0 chr17 21772469 21772498 -73500153 + (TTAA)n Simple_repeat Simple_repeat 3 31 0 4 751 3264 60 0 21 chr17 21772498 21772620 -73500031 - L1_Mus1 LINE L1 -7 6560 6439 4 751 947 190 112 134 chr17 21772620 21773022 -73499629 - RLTR9C LTR ERVK 0 393 1 4 751 3264 60 0 21 chr17 21773022 21773319 -73499332 - L1_Mus1 LINE L1 -129 6438 6149 4 751 728 280 34 65 chr17 21773319 21773356 -73499295 - B3 SINE B2 -179 37 2 4 751 419 236 35 43 chr17 21773414 21773529 -73499122 + PB1D9 SINE Alu 2 115 -5 4 751 403 300 15 23 chr17 21773910 21774043 -73498608 + B1_Mur3 SINE Alu 5 136 -13 4 751 403 289 77 11 chr17 21774234 21774416 -73498235 - Lx8 LINE L1 -553 6920 6727 4 751 510 17 0 0 chr17 21774429 21774488 -73498163 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 4 751 947 308 78 11 chr17 21774493 21774930 -73497721 - Lx8 LINE L1 -789 6684 6219 4 751 478 262 52 21 chr17 21774924 21775115 -73497536 - Lx7 LINE L1 -1904 5792 5596 4 751 246 154 39 0 chr17 21775118 21775170 -73497481 + RMER15 LTR ERVL 6 59 -516 4 751 543 263 86 21 chr17 21775245 21775509 -73497142 + RMER15 LTR ERVL 81 466 -109 4 751 820 246 59 5 chr17 21775509 21775713 -73496938 + B3 SINE B2 2 216 0 4 751 400 256 57 16 chr17 21775702 21775825 -73496826 + RMER15 LTR ERVL 448 575 0 4 751 2321 94 6 0 chr17 21775827 21776145 -73496506 + ORR1A2 LTR MaLR 1 320 -7 4 751 33379 68 1 4 chr17 21776283 21782367 -73490284 - L1Md_F2 LINE L1 0 6582 515 4 751 406 248 8 0 chr17 21782630 21782747 -73489904 - Lx9 LINE L1 -7 7637 7520 4 751 1166 197 39 53 chr17 21782753 21783091 -73489560 - Lx9 LINE L1 -519 7125 6793 4 751 1093 89 0 0 chr17 21783091 21783237 -73489414 + B1_Mus1 SINE Alu 2 147 -1 4 751 228 122 0 0 chr17 21783238 21783279 -73489372 + (A)n Simple_repeat Simple_repeat 1 41 0 4 751 340 232 160 0 chr17 21783283 21783408 -73489243 - Lx9 LINE L1 -843 6801 6657 4 751 4171 122 44 6 chr17 21783413 21784066 -73488585 - RLTR33 LTR ERVK 0 678 1 4 751 236 196 20 0 chr17 21784261 21784312 -73488339 - Lx9 LINE L1 -988 6656 6605 4 751 469 262 28 7 chr17 21784313 21784455 -73488196 - B1_Mur1 SINE Alu 0 149 5 4 751 624 243 20 20 chr17 21784493 21784640 -73488011 - B1_Mur3 SINE Alu -2 147 1 4 751 2054 204 66 18 chr17 21785014 21785514 -73487137 + RLTR11A2 LTR ERVK 4 527 0 4 751 377 298 25 42 chr17 21786100 21786219 -73486432 + B1F2 SINE Alu 1 117 0 4 751 189 0 0 0 chr17 21786320 21786341 -73486310 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 4 751 249 119 0 0 chr17 21786945 21786987 -73485664 + (GGAA)n Simple_repeat Simple_repeat 3 44 0 4 751 630 201 20 40 chr17 21788381 21788531 -73484120 + B1_Mur2 SINE Alu 3 149 0 4 751 189 0 0 0 chr17 21788542 21788563 -73484088 + (GAAA)n Simple_repeat Simple_repeat 4 24 0 4 751 265 227 0 0 chr17 21788662 21788706 -73483945 + B1_Mur4 SINE Alu 1 44 -106 4 751 383 86 0 0 chr17 21789955 21790013 -73482638 + L1Md_F2 LINE L1 6513 6570 -12 4 751 340 328 56 69 chr17 21790986 21791274 -73481377 - L1M4 LINE L1 -3715 2431 2148 4 751 227 296 48 57 chr17 21791444 21791673 -73480978 - L1M2 LINE L1 -1494 4649 4423 4 751 186 209 0 0 chr17 21791702 21791745 -73480906 + CT-rich Low_complexity Low_complexity 2 44 0 4 751 24 0 0 0 chr17 21791907 21791931 -73480720 + AT_rich Low_complexity Low_complexity 1 24 0 4 751 3045 211 99 4 chr17 21791998 21792792 -73479859 - Lx9 LINE L1 -163 7481 6612 4 751 546 268 21 27 chr17 21792792 21792980 -73479671 - Lx9 LINE L1 -1166 6478 6292 4 751 22 0 0 0 chr17 21793029 21793051 -73479600 + AT_rich Low_complexity Low_complexity 1 22 0 4 751 2023 138 25 0 chr17 21793064 21793383 -73479268 + ORR1A2 LTR MaLR 1 327 0 4 751 1338 218 59 14 chr17 21793456 21793900 -73478751 - Lx9 LINE L1 -1623 6021 5525 4 751 594 311 33 14 chr17 21795054 21795432 -73477219 - L1MA5 LINE L1 -364 5936 5507 4 751 333 0 0 0 chr17 21795441 21795478 -73477173 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 751 343 294 0 0 chr17 21795886 21796012 -73476639 + MurSatRep1 Unknown Unknown 620 745 -1392 4 751 1156 69 0 0 chr17 21796285 21796430 -73476221 - B1_Mus2 SINE Alu 0 147 3 4 751 254 255 0 0 chr17 21796889 21796936 -73475715 + B4 SINE B4 138 184 -108 4 751 295 363 59 7 chr17 21797006 21797142 -73475509 - B1F SINE Alu 0 149 7 4 751 747 179 7 29 chr17 21797679 21797817 -73474834 + B1_Mur3 SINE Alu 2 136 -13 4 751 533 253 13 13 chr17 21798730 21799034 -73473617 + MMSAT4 Satellite Satellite 1 304 -5 4 751 647 225 21 18 chr17 21799057 21799620 -73473031 + MMSAT4 Satellite Satellite 1 564 0 4 751 407 305 24 61 chr17 21799803 21800016 -73472635 - B3 SINE B2 -11 205 1 4 751 361 299 108 16 chr17 21800080 21800209 -73472442 + B1_Mur2 SINE Alu 3 143 -6 4 751 429 247 0 0 chr17 21800606 21800683 -73471968 + B1_Mus2 SINE Alu 3 79 -68 4 751 275 291 0 85 chr17 21800683 21800700 -73471951 + MT2B2 LTR ERVL 167 252 -332 4 751 453 308 126 11 chr17 21800873 21801136 -73471515 - Lx8 LINE L1 -553 6920 6628 4 751 388 281 36 45 chr17 21801332 21801552 -73471099 - Lx7 LINE L1 -1783 5913 5696 4 751 1718 139 125 60 chr17 21801558 21801926 -73470725 + ORR1B1 LTR MaLR 1 392 -2 4 751 659 97 0 0 chr17 21801928 21802021 -73470630 + ORR1B1-int LTR MaLR 6 98 -1411 4 751 6970 126 40 4 chr17 21802026 21803176 -73469475 + Lx4A LINE L1 5747 6937 -121 4 751 5383 113 34 25 chr17 21803550 21804879 -73467772 - L1VL2 LINE L1 -2221 1394 66 4 751 2699 102 13 3 chr17 21804879 21805271 -73467380 - MTB LTR MaLR -4 396 1 4 751 7641 155 18 4 chr17 21805271 21806701 -73465950 + L1_Mur2 LINE L1 3415 4863 -1014 4 751 4511 93 13 79 chr17 21806703 21807534 -73465117 + L1VL1 LINE L1 226 1001 -5421 4 751 35 0 0 0 chr17 21807567 21807602 -73465049 + AT_rich Low_complexity Low_complexity 1 35 0 4 751 9690 110 24 18 chr17 21807602 21809296 -73463355 + MusHAL1 LINE L1 376 2080 -632 4 751 627 112 0 0 chr17 21809366 21809464 -73463187 + (GGAA)n Simple_repeat Simple_repeat 4 101 0 4 751 652 217 0 28 chr17 21809478 21809620 -73463031 + B1_Mur4 SINE Alu 1 138 -12 4 751 351 65 0 0 chr17 21809622 21809668 -73462983 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 4 751 205 305 213 33 chr17 21810157 21810340 -73462311 + L3b LINE CR1 259 474 -8 4 751 5071 142 11 35 chr17 21810450 21811129 -73461522 + L1VL1 LINE L1 420 1082 -5556 4 751 189 0 0 0 chr17 21811129 21811150 -73461501 + (ATG)n Simple_repeat Simple_repeat 1 21 0 4 751 13636 117 10 40 chr17 21811150 21812800 -73459851 + L1VL1 LINE L1 1083 2721 -1193 4 751 1136 62 7 0 chr17 21812800 21812945 -73459706 + B1_Mus1 SINE Alu 3 148 0 4 751 13636 126 12 39 chr17 21812945 21814291 -73458360 + L1VL1 LINE L1 2722 4022 -1861 4 751 1732 167 120 15 chr17 21814291 21814739 -73457912 + BGLII_B LTR ERVK 3 436 -5 4 751 295 160 0 0 chr17 21815175 21815225 -73457426 + RLTR11A2 LTR ERVK 1 50 -477 4 751 2544 34 0 3 chr17 21815207 21815528 -73457123 + LTRIS_Mm LTR ERV1 163 482 0 4 751 414 39 0 0 chr17 21816257 21816309 -73456342 + (GGAA)n Simple_repeat Simple_repeat 3 54 0 4 751 630 201 20 40 chr17 21817711 21817861 -73454790 + B1_Mur2 SINE Alu 3 149 0 4 751 189 0 0 0 chr17 21817872 21817893 -73454758 + (GAAA)n Simple_repeat Simple_repeat 4 24 0 4 751 243 250 0 0 chr17 21817992 21818036 -73454615 + B1_Mur4 SINE Alu 1 44 -106 4 751 316 317 67 70 chr17 21819457 21819742 -73452909 - L1M4 LINE L1 -3715 2431 2148 4 751 351 278 44 53 chr17 21819911 21820139 -73452512 - L1M2 LINE L1 -1494 4649 4424 4 751 225 196 0 0 chr17 21820170 21820221 -73452430 + CT-rich Low_complexity Low_complexity 2 52 0 4 751 3411 203 64 5 chr17 21820473 21821291 -73451360 - Lx9 LINE L1 -162 7482 6617 4 751 676 263 17 0 chr17 21821291 21821470 -73451181 - Lx9 LINE L1 -1156 6488 6307 4 751 1883 153 33 15 chr17 21821559 21821891 -73450760 + ORR1A1 LTR MaLR 1 338 -8 4 751 1335 211 65 16 chr17 21821935 21822409 -73450242 - Lx9 LINE L1 -1591 6053 5525 4 751 21 0 0 0 chr17 21823154 21823175 -73449476 + AT_rich Low_complexity Low_complexity 1 21 0 4 751 912 322 42 46 chr17 21823592 21824331 -73448320 - L1_Rod LINE L1 -15 5832 5097 4 751 338 286 0 0 chr17 21824774 21824900 -73447751 + MurSatRep1 Unknown Unknown 620 745 -1392 4 751 1656 21 0 0 chr17 21825194 21825381 -73447270 + B2_Mm1a SINE B2 2 188 -5 5 751 239 277 0 0 chr17 21825807 21825854 -73446797 + B4 SINE B4 138 184 -108 5 751 705 198 8 22 chr17 21826576 21826710 -73445941 + B1_Mur3 SINE Alu 2 133 -16 5 751 21 0 0 0 chr17 21826856 21826877 -73445774 + AT_rich Low_complexity Low_complexity 1 21 0 5 751 539 243 8 8 chr17 21827563 21827898 -73444753 + MMSAT4 Satellite Satellite 1 335 0 5 751 656 198 19 17 chr17 21827956 21829192 -73443459 + MMSAT4 Satellite Satellite 1 1238 -1 5 751 353 237 0 88 chr17 21829380 21829482 -73443169 - B3A SINE B2 -16 182 90 5 751 252 263 132 0 chr17 21829612 21829688 -73442963 + B1_Mur3 SINE Alu 58 143 -6 5 751 5093 179 16 48 chr17 21829956 21831052 -73441599 - MERVL-int LTR ERVL -4425 1060 1 5 751 2829 88 149 89 chr17 21831052 21831464 -73441187 - MT2B2 LTR ERVL 0 584 110 5 751 4577 77 29 8 chr17 21831464 21832095 -73440556 + L1Md_F2 LINE L1 5939 6582 0 5 751 2829 88 149 89 chr17 21832095 21832233 -73440418 - MT2B2 LTR ERVL -475 109 1 5 751 3166 185 29 9 chr17 21832234 21833251 -73439400 - L1VL4 LINE L1 -1984 1575 537 5 751 1722 179 53 0 chr17 21833490 21833831 -73438820 - RLTR15 LTR ERVK 0 359 1 5 751 587 256 29 82 chr17 21833836 21834151 -73438500 + MYSERV16_I-int LTR ERVK 318 615 -1711 5 751 263 203 123 136 chr17 21834198 21834352 -73438299 + RMER4A LTR ERVK 288 439 -27 5 751 2500 252 39 30 chr17 21834352 21835400 -73437251 + MYSERV6-int LTR ERVK 7777 8782 -177 5 751 495 213 76 87 chr17 21835514 21835699 -73436952 + MYSERV-int LTR ERVK 6364 6546 -4 5 751 594 308 27 95 chr17 21835703 21835955 -73436696 + BGLII_B LTR ERVK 6 233 -208 5 751 5502 66 16 7 chr17 21835955 21836686 -73435965 + L1_Mus2 LINE L1 5828 6565 -1 5 751 594 308 27 95 chr17 21836686 21836803 -73435848 + BGLII_B LTR ERVK 234 350 -91 5 751 810 292 50 4 chr17 21836910 21837151 -73435500 - ORR1D1 LTR MaLR -122 252 1 5 751 561 326 27 0 chr17 21837798 21837985 -73434666 + MTD LTR MaLR 171 362 -57 5 751 692 103 0 9 chr17 21837985 21838093 -73434558 + (TTCC)n Simple_repeat Simple_repeat 2 108 0 5 751 444 292 61 24 chr17 21838179 21838558 -73434093 - L1_Mur3 LINE L1 -1432 4448 4056 5 751 682 285 42 11 chr17 21838562 21838822 -73433829 - MTD LTR MaLR -8 399 15 5 751 2451 293 82 15 chr17 21838944 21839175 -73433476 + Lx6 LINE L1 6491 6723 -737 5 751 3558 129 185 98 chr17 21839175 21840009 -73432642 + RMER17A2 LTR ERVK 1 906 0 5 751 2451 293 82 15 chr17 21840009 21840686 -73431965 + Lx6 LINE L1 6724 7460 0 5 751 6002 84 114 7 chr17 21841872 21842377 -73430274 - L1_Mus3 LINE L1 -1 6637 6102 5 751 3481 23 0 2 chr17 21842377 21842774 -73429877 - MTA_Mm LTR MaLR 0 396 1 5 751 6002 84 114 7 chr17 21842774 21843217 -73429434 - L1_Mus3 LINE L1 -537 6101 5588 5 751 473 266 15 15 chr17 21843227 21843948 -73428703 + MMSAT4 Satellite Satellite 1 721 0 5 751 330 270 0 39 chr17 21844088 21844165 -73428486 + B1_Mur3 SINE Alu 3 76 -73 5 751 189 0 0 0 chr17 21845246 21845267 -73427384 + (T)n Simple_repeat Simple_repeat 1 21 0 5 751 303 296 97 31 chr17 21847664 21848013 -73424638 - L1_Mur3 LINE L1 -1334 4809 4438 5 751 630 202 79 16 chr17 21848066 21848192 -73424459 + B1_Mur3 SINE Alu 1 134 -15 5 751 203 167 0 27 chr17 21848192 21848229 -73424422 + G-rich Low_complexity Low_complexity 1 36 0 5 751 30 0 0 0 chr17 21848346 21848376 -73424275 + AT_rich Low_complexity Low_complexity 1 30 0 5 751 733 308 135 19 chr17 21848572 21849098 -73423553 - Lx8 LINE L1 -423 7050 6464 5 751 394 291 102 21 chr17 21849316 21849663 -73422988 - L1_Mur3 LINE L1 -1977 4166 3761 5 751 351 320 152 23 chr17 21849798 21850239 -73422412 - L1_Mur3 LINE L1 -2590 3553 3056 5 751 326 315 0 0 chr17 21850443 21850516 -73422135 + B3A SINE B2 1 73 -125 5 751 379 337 70 36 chr17 21850500 21850888 -73421763 + Tigger1 DNA MER2_type 1671 2071 -347 5 751 1174 267 78 95 chr17 21851242 21851843 -73420808 - MT2B LTR ERVL -10 591 1 5 751 947 163 148 0 chr17 21853307 21853503 -73419148 - URR1A DNA MER1_type 0 226 2 5 751 234 242 0 0 chr17 21853705 21853767 -73418884 - L1M2 LINE L1 -538 5759 5698 5 751 196 113 18 36 chr17 21853941 21853996 -73418655 + T-rich Low_complexity Low_complexity 1 54 0 5 751 401 275 97 22 chr17 21853996 21854130 -73418521 - B1_Mur1 SINE Alu 0 149 6 5 751 227 256 11 11 chr17 21854139 21854226 -73418425 - L1_Mur3 LINE L1 -443 5437 5351 5 751 527 176 66 0 chr17 21854245 21854336 -73418315 + B1_Mus1 SINE Alu 1 97 -51 5 751 1161 169 97 14 chr17 21854515 21854808 -73417843 + Lx7 LINE L1 7108 7671 -25 5 751 1988 138 128 6 chr17 21854808 21855159 -73417492 + ORR1B1 LTR MaLR 1 394 0 5 751 821 259 125 31 chr17 21855159 21855197 -73417454 + Lx7 LINE L1 7422 7456 -4 5 751 648 174 52 0 chr17 21855208 21855323 -73417328 + ORR1B1 LTR MaLR 13 133 -261 5 751 794 266 45 0 chr17 21855341 21855518 -73417133 + B3 SINE B2 30 214 -2 5 751 25 0 0 0 chr17 21855971 21855996 -73416655 + AT_rich Low_complexity Low_complexity 1 25 0 5 751 275 122 20 0 chr17 21856123 21856172 -73416479 + (TCC)n Simple_repeat Simple_repeat 3 52 0 5 751 707 229 29 0 chr17 21857160 21857300 -73415351 - B1_Mus1 SINE Alu -3 145 2 5 751 1222 42 0 0 chr17 21857337 21857481 -73415170 + B1_Mus1 SINE Alu 2 145 -3 5 751 760 238 43 14 chr17 21857588 21857797 -73414854 - B3 SINE B2 0 216 2 5 751 290 286 0 0 chr17 21857928 21858026 -73414625 + MurSatRep1 Unknown Unknown 631 728 -1409 5 751 531 82 0 0 chr17 21858268 21858341 -73414310 + (TTCC)n Simple_repeat Simple_repeat 3 75 0 5 751 734 168 72 14 chr17 21858354 21858493 -73414158 - B1_Mus2 SINE Alu 0 147 1 5 751 531 236 31 29 chr17 21859328 21860725 -73411926 + MMSAT4 Satellite Satellite 1 1400 -1 5 751 1445 130 196 16 chr17 21862625 21862937 -73409714 - RLTR9A LTR ERVK 0 368 1 5 751 747 178 243 0 chr17 21863297 21863466 -73409185 + B3 SINE B2 1 210 -6 5 751 300 350 38 54 chr17 21863521 21863760 -73408891 - Lx8 LINE L1 -22 7451 7217 5 751 624 253 130 0 chr17 21864436 21864598 -73408053 - B3 SINE B2 -33 183 1 5 751 825 184 7 0 chr17 21864728 21864869 -73407782 + B1_Mur4 SINE Alu 9 150 0 5 751 411 113 0 0 chr17 21866266 21866328 -73406323 + (TA)n Simple_repeat Simple_repeat 1 62 0 5 751 282 308 112 28 chr17 21866703 21867148 -73405503 + L1MA8 LINE L1 5730 6218 -82 5 751 1297 14 0 0 chr17 21867153 21867300 -73405351 + B1_Mus2 SINE Alu 1 147 0 5 751 198 0 0 0 chr17 21867337 21867359 -73405292 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 751 471 167 0 164 chr17 21867384 21867411 -73405240 - PB1D9 SINE Alu -13 107 83 5 751 3248 47 3 0 chr17 21867411 21867795 -73404856 - IAPEY_LTR LTR ERVK 0 385 1 5 751 471 167 0 164 chr17 21867795 21867813 -73404838 - PB1D9 SINE Alu -38 82 78 5 751 1176 48 0 7 chr17 21867813 21867960 -73404691 - B1_Mus2 SINE Alu 0 147 2 5 751 471 167 0 164 chr17 21867960 21868035 -73404616 - PB1D9 SINE Alu -43 77 6 5 751 855 162 0 0 chr17 21868064 21868206 -73404445 - B1_Mur4 SINE Alu 0 150 9 5 751 238 270 30 45 chr17 21868957 21869023 -73403628 + MT2C_Mm LTR ERVL 176 240 -235 5 751 1030 68 0 0 chr17 21868996 21869129 -73403522 + B1_Mus1 SINE Alu 10 142 -6 5 751 209 33 33 0 chr17 21869131 21869161 -73403490 + (CAAAA)n Simple_repeat Simple_repeat 4 34 0 5 751 784 157 42 14 chr17 21870127 21870269 -73402382 - B1_Mus1 SINE Alu 0 148 3 5 751 1338 185 44 146 chr17 21871692 21872104 -73400547 - RLTR30 LTR ERV1 0 379 10 5 751 692 231 68 16 chr17 21872441 21872630 -73400021 - B3 SINE B2 -10 206 2 5 751 1143 61 0 7 chr17 21872810 21872958 -73399693 + B1_Mus2 SINE Alu 1 147 0 5 751 277 254 94 104 chr17 21873350 21873412 -73399239 - L1M3 LINE L1 -1359 4781 4720 5 751 1670 21 0 0 chr17 21873412 21873600 -73399051 + B2_Mm1t SINE B2 1 188 -5 5 751 277 254 94 104 chr17 21873600 21873739 -73398912 - L1M3 LINE L1 -1421 4719 4582 5 751 305 297 165 6 chr17 21873794 21873970 -73398681 - L1M4 LINE L1 -1367 4779 4576 5 751 544 178 19 38 chr17 21874084 21874189 -73398462 - B1_Mus1 SINE Alu -43 105 3 5 751 405 343 45 16 chr17 21874218 21874461 -73398190 - L1M4 LINE L1 -3430 2716 2467 5 751 216 0 0 0 chr17 21874505 21874529 -73398122 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 751 1278 93 27 5 chr17 21874841 21875025 -73397626 - B2_Mm2 SINE B2 -6 189 2 5 751 233 222 14 14 chr17 21875057 21875130 -73397521 - L1M2 LINE L1 -688 5603 5531 5 751 383 295 68 97 chr17 21875248 21875436 -73397215 - L1M2 LINE L1 -1079 5064 4862 5 751 4841 60 6 11 chr17 21875436 21876061 -73396590 + L1_Mus1 LINE L1 5946 6567 0 5 751 383 295 68 97 chr17 21876061 21876180 -73396471 - L1M2 LINE L1 -1282 4861 4766 5 751 330 26 0 0 chr17 21876192 21876231 -73396420 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 751 966 116 0 14 chr17 21876233 21876373 -73396278 - B1_Mur4 SINE Alu -12 138 1 5 751 905 197 0 0 chr17 21876521 21876663 -73395988 - B1_Mus1 SINE Alu -1 147 6 5 751 240 35 0 0 chr17 21876911 21876940 -73395711 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 751 1643 214 122 18 chr17 21876940 21877392 -73395259 - RLTR19 LTR ERVK 0 499 1 5 751 198 0 0 0 chr17 21877464 21877486 -73395165 + (T)n Simple_repeat Simple_repeat 1 22 0 5 751 1181 27 0 75 chr17 21877496 21877655 -73394996 - B1_Mm SINE Alu 0 147 1 5 751 641 194 210 0 chr17 21877830 21878016 -73394635 + URR1B DNA MER1_type 1 225 0 5 751 306 148 0 0 chr17 21878088 21878142 -73394509 + (T)n Simple_repeat Simple_repeat 1 54 0 5 751 810 180 7 0 chr17 21878166 21878305 -73394346 - B1_Mur4 SINE Alu -9 141 2 5 751 569 157 194 24 chr17 21878478 21878602 -73394049 - B1_Mm SINE Alu -1 146 2 5 751 549 202 121 0 chr17 21878724 21878848 -73393803 - B1_Mur2 SINE Alu -8 141 3 5 751 393 117 0 0 chr17 21879333 21879393 -73393258 + (A)n Simple_repeat Simple_repeat 1 60 0 5 751 295 313 0 0 chr17 21879480 21879595 -73393056 + MurSatRep1 Unknown Unknown 631 745 -1392 5 751 501 319 64 94 chr17 21880019 21880348 -73392303 - RLTR25B LTR ERVK -709 319 1 5 751 259 365 43 14 chr17 21880501 21880640 -73392011 - B3A SINE B2 -6 192 50 5 751 592 194 0 18 chr17 21881032 21881142 -73391509 - B1_Mur4 SINE Alu -3 147 40 5 751 470 261 85 0 chr17 21881415 21881545 -73391106 - B1_Mur2 SINE Alu -8 141 1 6 751 548 227 28 20 chr17 21882495 21883861 -73388790 + MMSAT4 Satellite Satellite 1 1376 -2 6 751 347 113 0 14 chr17 21884325 21884397 -73388254 + (TTTTTG)n Simple_repeat Simple_repeat 2 72 0 6 751 754 168 33 59 chr17 21884895 21885047 -73387604 + B1_Mur4 SINE Alu 1 148 -2 6 751 243 61 0 0 chr17 21885083 21885116 -73387535 + (GA)n Simple_repeat Simple_repeat 2 34 0 6 751 1110 109 0 0 chr17 21886390 21886537 -73386114 + B1_Mus1 SINE Alu 2 148 0 6 751 201 94 0 0 chr17 21886558 21886590 -73386061 + (TC)n Simple_repeat Simple_repeat 1 32 0 6 751 1316 82 33 0 chr17 21888502 21888685 -73383966 - B2_Mm2 SINE B2 -6 189 1 6 751 334 213 133 0 chr17 21888914 21888989 -73383662 - B1_Mus2 SINE Alu -6 141 57 6 752 525 276 77 12 chr17 21889053 21889222 -73383429 - B3 SINE B2 -5 211 32 6 752 317 240 134 10 chr17 21889367 21889464 -73383187 - B1_Mur2 SINE Alu -8 141 33 6 752 1192 61 0 0 chr17 21889493 21889640 -73383011 - B1_Mus2 SINE Alu 0 147 1 6 752 840 169 7 0 chr17 21889669 21889805 -73382846 + B1_Mur4 SINE Alu 2 138 -12 6 752 204 40 0 0 chr17 21890568 21890593 -73382058 + (CCCCCA)n Simple_repeat Simple_repeat 2 26 0 6 752 2402 152 80 16 chr17 21891239 21891488 -73381163 - RLTR28B LTR ERVL -12 469 190 6 752 454 113 45 45 chr17 21891488 21891599 -73381052 - L1Md_F2 LINE L1 0 6582 6472 6 752 2402 152 80 16 chr17 21891599 21891789 -73380862 - RLTR28B LTR ERVL -292 189 2 6 752 187 31 30 30 chr17 21891941 21891974 -73380677 + (TTG)n Simple_repeat Simple_repeat 2 34 0 6 752 455 120 0 62 chr17 21891974 21892054 -73380597 - B2_Mm2 SINE B2 -12 183 109 6 752 1432 69 5 0 chr17 21892349 21892537 -73380114 - B2_Mm1t SINE B2 -2 191 3 6 752 421 305 49 14 chr17 21892675 21892818 -73379833 - B1_Mur2 SINE Alu -1 148 1 6 752 775 258 15 25 chr17 21892919 21893122 -73379529 + B3 SINE B2 13 213 -3 6 752 2255 99 12 44 chr17 21894439 21894498 -73378153 - ORR1A2 LTR MaLR 0 327 283 6 752 1180 62 0 0 chr17 21894498 21894644 -73378007 - B1_Mus2 SINE Alu 0 147 2 6 752 2255 99 12 44 chr17 21894644 21894922 -73377729 - ORR1A2 LTR MaLR -45 282 1 6 752 526 347 84 5 chr17 21895046 21895417 -73377234 - Lx8 LINE L1 -475 6998 6599 6 752 243 255 35 70 chr17 21895968 21896082 -73376569 - LTRIS5 LTR ERV1 -157 290 181 6 752 305 282 68 15 chr17 21896710 21896843 -73375808 - B1_Mur1 SINE Alu -9 140 1 6 752 778 245 39 39 chr17 21896877 21897081 -73375570 - B3 SINE B2 -8 208 5 6 752 299 191 21 43 chr17 21897094 21897187 -73375464 - L1_Mm LINE L1 -432 5451 5361 6 752 1784 159 17 91 chr17 21897505 21897569 -73375082 - ORR1A3 LTR MaLR 0 326 283 6 752 4114 58 4 8 chr17 21897569 21898092 -73374559 - L1_Mus3 LINE L1 -5 6633 6113 6 752 1784 159 17 91 chr17 21898092 21898379 -73374272 - ORR1A3 LTR MaLR -44 282 1 6 752 696 294 31 41 chr17 21898379 21898574 -73374077 - B3 SINE B2 -23 193 1 6 752 722 171 78 0 chr17 21898870 21898999 -73373652 - B1_Mus2 SINE Alu 0 147 9 6 752 208 95 48 0 chr17 21899025 21899067 -73373584 + (TTTTG)n Simple_repeat Simple_repeat 1 44 0 6 752 1176 62 7 0 chr17 21899067 21899213 -73373438 - B1_Mm SINE Alu 0 147 1 6 752 770 176 29 0 chr17 21899446 21899582 -73373069 - B1_Mur4 SINE Alu -9 141 2 6 752 1063 99 12 0 chr17 21899718 21899890 -73372761 + (TTTC)n Simple_repeat Simple_repeat 3 176 0 6 752 587 87 9 28 chr17 21899890 21899997 -73372654 + (TTC)n Simple_repeat Simple_repeat 2 106 0 6 752 181 185 0 53 chr17 21900110 21900167 -73372484 + GA-rich Low_complexity Low_complexity 5 58 0 6 752 680 79 59 0 chr17 21900207 21900308 -73372343 - BC1_Mm scRNA scRNA -43 109 3 6 752 1476 128 136 0 chr17 21901221 21901471 -73371180 + ORR1A2 LTR MaLR 5 288 -39 6 752 261 54 27 0 chr17 21901529 21901566 -73371085 + ORR1A2 LTR MaLR 289 326 0 6 752 669 197 14 43 chr17 21901700 21901838 -73370813 + B1_Mur4 SINE Alu 2 135 -15 6 752 522 0 0 0 chr17 21901839 21901897 -73370754 + (GAA)n Simple_repeat Simple_repeat 1 58 0 6 752 278 77 0 0 chr17 21901897 21901930 -73370721 + L1Md_F2 LINE L1 5554 5586 -297 6 752 8799 14 1 0 chr17 21901930 21902923 -73369728 + L1Md_A LINE L1 5587 6580 -2 6 752 627 159 0 0 chr17 21902928 21903041 -73369610 + GA-rich Low_complexity Low_complexity 3 115 0 6 752 299 138 69 40 chr17 21903471 21903644 -73369007 + (TA)n Simple_repeat Simple_repeat 1 178 0 6 752 8350 34 0 2 chr17 21903657 21904649 -73368002 + L1Md_F2 LINE L1 5593 6582 0 6 752 334 183 40 45 chr17 21904653 21904830 -73367821 + (TATAA)n Simple_repeat Simple_repeat 4 179 0 6 752 324 204 65 12 chr17 21904875 21905044 -73367607 + (TA)n Simple_repeat Simple_repeat 2 179 0 6 752 246 247 24 37 chr17 21904968 21905132 -73367519 + (TATAA)n Simple_repeat Simple_repeat 5 166 0 6 752 1703 47 0 0 chr17 21905980 21906194 -73366457 - L1Md_F2 LINE L1 -122 6460 6247 6 752 1775 150 3 47 chr17 21906418 21906739 -73365912 - ORR1A3 LTR MaLR -19 307 1 6 752 492 271 30 0 chr17 21907244 21907377 -73365274 - B1_Mur1 SINE Alu -11 138 2 6 752 391 219 209 45 chr17 21907490 21907667 -73364984 + B3 SINE B2 3 208 -8 6 752 377 287 66 25 chr17 21908013 21908299 -73364352 - L1M3 LINE L1 -1097 5043 4746 6 752 4342 41 2 8 chr17 21909193 21909708 -73362943 - LTRIS3 LTR ERV1 0 512 1 6 752 2929 60 34 3 chr17 21909970 21910358 -73362293 + MTB LTR MaLR 1 400 0 6 752 2314 103 38 44 chr17 21910475 21910842 -73361809 - RLTR8 LTR ERVK 0 365 1 6 752 953 163 0 0 chr17 21911162 21911303 -73361348 + B1_Mur4 SINE Alu 2 142 -8 6 752 826 148 6 99 chr17 21911587 21911759 -73360892 + RLTR6_Mm LTR ERV1 1 156 -498 6 752 542 200 225 45 chr17 21911772 21912039 -73360612 + RLTR6_Mm LTR ERV1 276 590 -64 6 752 390 272 246 11 chr17 21912464 21912639 -73360012 - B3 SINE B2 0 216 1 6 752 1261 101 11 6 chr17 21912911 21913091 -73359560 + B2_Mm2 SINE B2 1 181 -14 6 752 607 293 106 0 chr17 21913244 21913432 -73359219 - B3 SINE B2 -3 213 6 6 752 814 175 7 0 chr17 21913541 21913678 -73358973 - B1_Mus2 SINE Alu -1 146 9 6 752 483 291 11 85 chr17 21913548 21913736 -73358915 - ID_B1 SINE B4 -8 216 43 6 752 233 163 0 20 chr17 21914608 21914658 -73357993 - L1MEg LINE L1 -4717 1367 1319 6 752 1372 92 0 5 chr17 21915420 21915605 -73357046 + B2_Mm2 SINE B2 2 185 -10 6 752 237 254 81 74 chr17 21916022 21916171 -73356480 - Lx8 LINE L1 -348 7125 6976 6 752 449 349 42 11 chr17 21916246 21916602 -73356049 - Lx8 LINE L1 -613 6860 6494 6 752 1008 92 42 0 chr17 21916622 21916764 -73355887 - B1_Mus1 SINE Alu 0 148 1 6 752 2295 186 17 5 chr17 21916995 21917410 -73355241 + MTC LTR MaLR 1 420 -1 6 752 3974 190 144 34 chr17 21917422 21918333 -73354318 + MTC-int LTR MaLR 21 1031 -227 6 752 1609 185 3 91 chr17 21918325 21918576 -73354075 + MTC LTR MaLR 140 377 -44 6 752 1181 55 0 7 chr17 21918576 21918723 -73353928 - B1_Mus2 SINE Alu -1 146 1 6 752 1609 185 3 91 chr17 21918723 21918780 -73353871 + MTC LTR MaLR 378 421 0 6 752 337 333 99 13 chr17 21918877 21919293 -73353358 - L1_Mur3 LINE L1 -1771 4076 3619 6 752 257 242 65 0 chr17 21919293 21919355 -73353296 + MT2B LTR ERVL 1 66 -535 6 752 224 213 0 16 chr17 21919355 21919417 -73353234 + CT-rich Low_complexity Low_complexity 3 63 0 6 752 288 0 0 0 chr17 21919459 21919491 -73353160 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 752 343 315 107 15 chr17 21919689 21920015 -73352636 - L1M2 LINE L1 -1082 5061 4706 6 752 273 57 0 0 chr17 21920346 21920381 -73352270 + (TCC)n Simple_repeat Simple_repeat 2 36 0 6 752 804 204 7 13 chr17 21920381 21920530 -73352121 - B1_Mur4 SINE Alu -1 149 2 6 752 213 65 0 0 chr17 21921184 21921215 -73351436 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 6 752 472 282 91 20 chr17 21921508 21921707 -73350944 - B3 SINE B2 -3 213 1 6 752 661 157 0 0 chr17 21921912 21922014 -73350637 - B1_Mur3 SINE Alu -17 132 31 6 752 1063 100 7 0 chr17 21922477 21922617 -73350034 - B1_Mus1 SINE Alu -6 142 2 6 752 1154 133 40 0 chr17 21923053 21923226 -73349425 - B2_Mm2 SINE B2 -14 181 2 6 752 237 98 0 0 chr17 21923257 21923298 -73349353 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 6 752 793 172 0 0 chr17 21923311 21923433 -73349218 - B1_Mur3 SINE Alu -27 122 1 6 752 454 320 64 5 chr17 21923459 21923663 -73348988 - B3 SINE B2 0 216 1 6 752 363 287 0 0 chr17 21923837 21923952 -73348699 + MurSatRep1 Unknown Unknown 631 745 -1392 6 752 468 248 14 50 chr17 21924389 21924529 -73348122 + B1_Mur2 SINE Alu 13 147 -2 6 752 799 174 16 22 chr17 21925227 21925908 -73346743 + MMSAT4 Satellite Satellite 1 677 0 6 752 385 214 38 19 chr17 21926192 21926297 -73346354 + RMER15 LTR ERVL 3 109 -466 6 752 758 314 118 7 chr17 21926313 21926602 -73346049 + RMER15 LTR ERVL 209 529 -46 6 752 772 265 231 46 chr17 21927384 21927799 -73344852 + MT2B LTR ERVL 27 518 -83 6 752 447 19 0 0 chr17 21927802 21927854 -73344797 + (GA)n Simple_repeat Simple_repeat 2 53 0 6 752 933 303 162 44 chr17 21927859 21928348 -73344303 + MTC-int LTR MaLR 638 1142 -438 6 752 1147 69 0 0 chr17 21928372 21928517 -73344134 - B1_Mus2 SINE Alu 0 147 3 6 752 1056 240 162 21 chr17 21928634 21928962 -73343689 + MTD LTR MaLR 18 391 -28 6 752 3963 197 92 33 chr17 21928996 21929160 -73343491 - RLTR25A LTR ERVK -70 1033 892 6 752 351 0 0 0 chr17 21929160 21929199 -73343452 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 752 3963 197 92 33 chr17 21929199 21929630 -73343021 - RLTR25A LTR ERVK -212 891 432 6 752 1170 68 0 0 chr17 21929630 21929776 -73342875 - B1_Mus2 SINE Alu 0 147 2 6 752 3963 197 92 33 chr17 21929776 21930154 -73342497 - RLTR25A LTR ERVK -672 431 5 6 752 300 232 73 0 chr17 21930154 21930236 -73342415 - RLTR25A LTR ERVK -1015 88 1 6 752 555 289 7 7 chr17 21930237 21930380 -73342271 - B1_Mur2 SINE Alu -5 144 2 6 752 697 167 7 14 chr17 21931185 21931331 -73341320 + CT-rich Low_complexity Low_complexity 3 147 0 6 752 7162 72 23 1 chr17 21931363 21932972 -73339679 - L1_Mus2 LINE L1 0 6566 4914 7 752 1210 185 50 16 chr17 21933344 21933586 -73339065 + ORR1C2 LTR MaLR 135 384 0 7 752 721 175 260 18 chr17 21933999 21934168 -73338483 + B3 SINE B2 1 210 -6 7 752 1896 161 5 78 chr17 21934885 21935256 -73337395 + RLTR41 LTR ERV1 96 439 -7 7 752 2269 106 21 6 chr17 21935256 21935588 -73337063 + Lx3_Mus LINE L1 6673 7009 0 7 752 6266 136 34 1 chr17 21935599 21936959 -73335692 + Lx LINE L1 5123 6518 -136 7 752 279 0 0 0 chr17 21936959 21936990 -73335661 + (TGGG)n Simple_repeat Simple_repeat 3 33 0 7 752 6266 131 42 2 chr17 21936990 21937107 -73335544 + Lx LINE L1 6519 6652 -2 7 752 282 287 125 29 chr17 21937233 21937337 -73335314 + B3 SINE B2 103 216 0 7 752 323 220 42 63 chr17 21937431 21937571 -73335080 - RLTR13D3 LTR ERVK -49 1065 845 7 752 2913 15 0 3 chr17 21938048 21938375 -73334276 + IAPLTR3 LTR ERVK 1 326 0 7 752 52911 21 2 0 chr17 21938375 21945159 -73327492 + IAPLTR3-int LTR ERVK 1 6801 -20 7 752 2916 21 0 0 chr17 21945162 21945488 -73327163 - IAPLTR3 LTR ERVK 0 326 1 7 752 295 118 56 47 chr17 21945728 21945804 -73326847 + B2_Mm2 SINE B2 107 188 -7 7 752 36089 45 1 5 chr17 21946635 21953101 -73319550 - L1Md_T LINE L1 -1 6584 66 7 752 575 257 75 14 chr17 21953163 21953489 -73319162 - L1_Mur1 LINE L1 -6702 280 15 7 752 274 330 20 60 chr17 21953596 21953696 -73318955 - URR1B DNA MER1_type -129 96 1 7 752 698 342 22 4 chr17 21953808 21954075 -73318576 - RMER15 LTR ERVL -65 510 239 7 752 261 234 137 11 chr17 21954117 21954212 -73318439 - RMER15 LTR ERVL -466 109 3 7 752 390 212 39 17 chr17 21954585 21954747 -73317904 - MMSAT4 Satellite Satellite -27 165 1 7 752 932 170 3 3 chr17 21954769 21955217 -73317434 - MMSAT4 Satellite Satellite -43 448 1 7 752 1025 145 0 1 chr17 21955229 21956777 -73315874 - MMSAT4 Satellite Satellite 0 1546 1 7 752 226 345 22 33 chr17 21957484 21957574 -73315077 - B1F SINE Alu 0 149 61 7 752 231 301 9 9 chr17 21958031 21958145 -73314506 - MurSatRep1 Unknown Unknown -1393 744 631 7 752 341 354 27 20 chr17 21958503 21958653 -73313998 + B3 SINE B2 61 211 -5 7 752 329 333 21 21 chr17 21959482 21959623 -73313028 + B3 SINE B2 76 216 0 7 752 992 97 18 24 chr17 21960148 21960310 -73312341 + L1Md_F2 LINE L1 6404 6564 -18 7 752 207 0 0 0 chr17 21960310 21960333 -73312318 + (CAA)n Simple_repeat Simple_repeat 2 24 0 7 752 236 311 40 0 chr17 21961026 21961100 -73311551 + B3 SINE B2 125 201 -15 7 752 280 159 0 0 chr17 21961609 21961653 -73310998 - URR1B DNA MER1_type 0 225 182 7 752 1121 88 0 26 chr17 21962405 21962556 -73310095 - B1_Mus1 SINE Alu 0 148 2 7 752 253 31 0 0 chr17 21963033 21963065 -73309586 - L1Md_T LINE L1 -334 6248 6217 7 752 812 10 0 0 chr17 21963065 21963169 -73309482 + L1Md_T LINE L1 6479 6582 0 7 752 5098 97 12 72 chr17 21963863 21964718 -73307933 - RLTR13B4 LTR ERVK 0 803 1 7 752 311 374 33 19 chr17 21964734 21964949 -73307702 + L1MC LINE L1 3811 4028 -2118 7 752 180 0 0 0 chr17 21965130 21965150 -73307501 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 7 752 524 319 94 47 chr17 21965184 21965671 -73306980 + Lx8 LINE L1 6446 6955 -518 7 752 860 62 0 0 chr17 21966181 21966293 -73306358 - B1_Mm SINE Alu -34 113 2 7 752 14859 108 31 10 chr17 21966303 21966393 -73306258 + Lx4A LINE L1 3366 3481 -2396 7 752 195 0 86 0 chr17 21966393 21966428 -73306223 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 7 752 14859 108 31 10 chr17 21966428 21968649 -73304002 + Lx4A LINE L1 3482 5731 -146 7 752 1300 99 5 10 chr17 21968649 21968843 -73303808 + B2_Mm2 SINE B2 1 193 -2 7 752 14859 146 24 12 chr17 21968843 21970134 -73302517 + Lx4A LINE L1 5732 7057 -1 7 752 34 0 0 0 chr17 21970134 21970168 -73302483 + AT_rich Low_complexity Low_complexity 1 34 0 7 752 476 233 26 23 chr17 21970174 21970533 -73302118 + MMSAT4 Satellite Satellite 1 360 0 7 752 4599 148 79 23 chr17 21970705 21971659 -73300992 + RMER12B LTR ERVK 1 1200 -204 7 752 336 102 0 0 chr17 21971659 21971708 -73300943 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 752 4599 172 148 81 chr17 21971708 21971831 -73300820 + RMER12B LTR ERVK 1128 1288 -284 7 752 414 0 0 0 chr17 21971831 21971877 -73300774 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 752 559 190 192 120 chr17 21971877 21971966 -73300685 + RMER12B LTR ERVK 1289 1375 -197 7 752 1150 61 0 0 chr17 21971966 21972113 -73300538 + B1_Mus2 SINE Alu 1 147 0 7 752 582 192 141 86 chr17 21972113 21972258 -73300393 + RMER12B LTR ERVK 1293 1467 -105 7 752 418 246 17 17 chr17 21972353 21972473 -73300178 + RMER15 LTR ERVL 1 120 -455 7 752 866 319 44 41 chr17 21972487 21972827 -73299824 + RMER15 LTR ERVL 218 558 -17 7 752 492 32 0 0 chr17 21973070 21973132 -73299519 + (GA)n Simple_repeat Simple_repeat 1 62 0 7 752 247 62 0 0 chr17 21974866 21974898 -73297753 + ORR1A4 LTR MaLR 1 32 -297 7 752 777 195 15 69 chr17 21975574 21975778 -73296873 + B2_Mm2 SINE B2 1 193 -2 7 752 351 0 0 0 chr17 21976558 21976597 -73296054 + (GA)n Simple_repeat Simple_repeat 2 40 0 7 752 252 0 0 0 chr17 21976597 21976625 -73296026 + (GAA)n Simple_repeat Simple_repeat 3 30 0 7 752 273 331 60 16 chr17 21976644 21976896 -73295755 + L1M3 LINE L1 3784 4046 -1801 7 752 778 320 80 19 chr17 21977034 21977496 -73295155 + Lx8 LINE L1 6466 6955 -518 7 752 4750 193 21 126 chr17 21977812 21978416 -73294235 + L1_Mur3 LINE L1 4399 4939 -941 7 752 933 119 29 12 chr17 21978416 21978586 -73294065 - Lx LINE L1 -2 6652 6480 7 752 4750 193 21 126 chr17 21978586 21979533 -73293118 + L1_Mur3 LINE L1 4940 5786 -94 7 752 360 288 198 26 chr17 21979739 21980042 -73292609 + L1M4 LINE L1 2384 2738 -3408 7 752 313 224 176 9 chr17 21980045 21980153 -73292498 + B1_Mur4 SINE Alu 25 150 0 7 752 531 252 54 3 chr17 21980215 21980391 -73292260 + Lx3B LINE L1 6808 7009 0 7 752 1249 96 73 0 chr17 21980595 21980773 -73291878 - B2_Mm2 SINE B2 -4 191 1 7 752 1276 14 0 0 chr17 21983472 21983618 -73289033 + B1_Mm SINE Alu 2 147 0 7 752 387 41 0 0 chr17 21983618 21983667 -73288984 + (A)n Simple_repeat Simple_repeat 1 49 0 7 752 5719 188 41 11 chr17 21983982 21984167 -73288484 - L1_Mur2 LINE L1 -1302 4575 4396 7 752 1668 232 56 6 chr17 21984167 21984669 -73287982 - RLTR11A2 LTR ERVK 0 527 1 7 752 5719 188 41 11 chr17 21984669 21985795 -73286856 - L1_Mur2 LINE L1 -1482 4395 3224 7 752 797 82 0 109 chr17 21986070 21986195 -73286456 + B1_Mm SINE Alu 26 138 -9 7 752 249 57 0 0 chr17 21986195 21986230 -73286421 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 752 797 82 0 109 chr17 21986230 21986241 -73286410 + B1_Mm SINE Alu 139 147 0 7 752 2810 120 57 0 chr17 21986317 21986741 -73285910 + RMER13B LTR ERVK 1 448 -460 7 752 2289 174 9 2 chr17 21986743 21987372 -73285279 + L1_Mur2 LINE L1 1058 1690 -4187 7 752 186 133 0 0 chr17 21989321 21989351 -73283300 + (GAGAA)n Simple_repeat Simple_repeat 5 34 0 7 752 19071 73 7 1 chr17 21989613 21990642 -73282009 - L1_Mus1 LINE L1 -3 6564 5535 7 752 7208 26 0 4 chr17 21990642 21991467 -73281184 + RLTR13B2 LTR ERVK 1 822 0 7 752 19071 102 4 18 chr17 21991467 21994100 -73278551 - L1_Mus1 LINE L1 -349 5534 2939 7 752 3586 136 3 69 chr17 21994100 21995249 -73277402 - L1_Mus1 LINE L1 -4103 1780 725 7 752 415 263 15 8 chr17 21995251 21995385 -73277266 - L1_Mus1 LINE L1 -5807 809 675 7 752 424 234 14 95 chr17 21995419 21995607 -73277044 - L1VL1 LINE L1 -6030 392 239 7 752 403 217 31 106 chr17 21995666 21995826 -73276825 - L1VL1 LINE L1 -6022 400 253 7 752 214 26 51 26 chr17 21996004 21996043 -73276608 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 7 752 354 119 161 35 chr17 21996224 21996311 -73276340 + RMER17B LTR ERVK 370 467 -491 7 752 300 111 0 0 chr17 21996311 21996365 -73276286 + (GA)n Simple_repeat Simple_repeat 1 54 0 7 752 441 249 103 75 chr17 21996528 21996741 -73275910 - RLTR23 LTR ERV1 -10 420 202 7 752 397 136 159 0 chr17 21996935 21997023 -73275628 - RLTR23 LTR ERV1 -328 102 1 7 752 1330 31 0 0 chr17 21997089 21997249 -73275402 + B2_Mm1a SINE B2 1 160 -33 7 752 270 0 0 0 chr17 21997249 21997279 -73275372 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 7 752 393 254 38 23 chr17 21997438 21997571 -73275080 - Lx8 LINE L1 -518 6955 6821 7 752 242 174 43 14 chr17 21997686 21997756 -73274895 + T-rich Low_complexity Low_complexity 2 73 0 7 752 331 296 74 19 chr17 21997773 21997935 -73274716 - Lx8 LINE L1 -839 6634 6464 7 752 464 321 19 19 chr17 21998289 21998502 -73274149 + B3 SINE B2 2 214 -2 7 752 21 82 0 0 chr17 21999029 21999078 -73273573 + AT_rich Low_complexity Low_complexity 1 49 0 7 752 3335 135 8 49 chr17 22000467 22001058 -73271593 + RMER2 LTR ERV1 1 567 0 1 752 1174 114 0 0 chr17 22002823 22002989 -73269662 - ORR1A2 LTR MaLR -161 166 1 2 752 1925 157 134 6 chr17 22003738 22004097 -73268554 - RLTR44A LTR ERVK 0 405 1 3 752 1133 168 38 13 chr17 22004858 22005093 -73267558 - RLTR22_Mur LTR ERVK -1277 571 331 4 752 1443 169 27 72 chr17 22005082 22005413 -73267238 + RMER6A LTR ERVK 441 756 0 5 752 1293 202 122 22 chr17 22006262 22006581 -73266070 - ORR1B1 LTR MaLR -3 391 41 6 752 897 88 20 7 chr17 22006656 22006804 -73265847 + L1_Mus3 LINE L1 6483 6632 -6 7 752 678 334 80 15 chr17 22006843 22007180 -73265471 - ORR1D2 LTR MaLR -7 363 5 8 752 486 298 57 53 chr17 22008002 22008264 -73264387 - RMER2 LTR ERV1 -16 551 289 9 752 4006 209 64 17 chr17 22009204 22010069 -73262582 + RMER13B LTR ERVK 1 905 -3 1 752 539 261 46 0 chr17 22010072 22010202 -73262449 - MuRRS4-int LTR ERV1 -1100 3963 3828 1 752 216 97 0 0 chr17 22011464 22011495 -73261156 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 1 752 397 268 182 35 chr17 22011495 22011518 -73261133 - B4A SINE B4 -52 240 131 1 752 577 236 18 9 chr17 22011518 22011629 -73261022 - PB1D9 SINE Alu -6 114 3 1 752 363 291 55 23 chr17 22012055 22012199 -73260452 - B1F1 SINE Alu 0 149 1 1 752 1738 182 90 36 chr17 22013319 22013740 -73258911 - Lx5 LINE L1 -134 6916 6473 1 752 2405 215 60 12 chr17 22013733 22014662 -73257989 - Lx4B LINE L1 -243 6807 5812 1 752 2026 46 0 11 chr17 22015514 22015776 -73256875 + L1Md_F2 LINE L1 6323 6581 -1 1 752 770 312 60 13 chr17 22015802 22016104 -73256547 - RMER15 LTR ERVL -12 563 248 1 752 1091 153 11 5 chr17 22016565 22017297 -73255354 - MMSAT4 Satellite Satellite -2 736 1 2 752 903 149 0 0 chr17 22017312 22017684 -73254967 - MMSAT4 Satellite Satellite 0 372 1 2 752 272 337 0 34 chr17 22018381 22018470 -73254181 - B1F SINE Alu 0 149 64 2 753 22 0 0 0 chr17 22020106 22020128 -73252523 + AT_rich Low_complexity Low_complexity 1 22 0 2 753 5463 73 20 0 chr17 22020316 22021081 -73251570 - L1_Mus1 LINE L1 0 6567 5839 2 753 10952 125 16 2 chr17 22021246 22023031 -73249620 - L1_Mm LINE L1 -48 5835 4026 2 753 363 311 82 64 chr17 22025078 22025298 -73247353 - URR1B DNA MER1_type 0 225 2 2 753 2413 95 9 3 chr17 22025685 22026034 -73246617 - L1_Mus2 LINE L1 0 6566 6216 2 753 997 78 42 0 chr17 22026350 22026492 -73246159 + B1_Mus1 SINE Alu 1 148 0 2 753 339 354 79 40 chr17 22026511 22026840 -73245811 + L1MD LINE L1 3662 4003 -2143 2 753 346 355 45 15 chr17 22027215 22027481 -73245170 + Lx8 LINE L1 6481 6754 -719 2 753 225 0 0 0 chr17 22027481 22027506 -73245145 + (TA)n Simple_repeat Simple_repeat 1 25 0 3 753 263 333 89 40 chr17 22028329 22028554 -73244097 - Tigger1 DNA MER2_type -455 1963 1728 3 753 324 354 96 10 chr17 22028653 22028850 -73243801 - B3 SINE B2 -1 215 2 3 753 999 130 0 25 chr17 22029015 22029213 -73243438 - L1_Mm LINE L1 -1854 4029 3837 3 753 406 285 38 52 chr17 22030782 22030993 -73241658 - B3 SINE B2 -4 212 5 3 753 366 260 0 0 chr17 22031278 22031351 -73241300 - MTC LTR MaLR -137 284 212 3 753 334 234 250 6 chr17 22031404 22031528 -73241123 + B3 SINE B2 60 210 -6 3 753 1049 97 21 0 chr17 22031706 22031850 -73240801 + B1_Mus1 SINE Alu 2 148 0 3 753 222 62 0 0 chr17 22031853 22031885 -73240766 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 3 753 5811 111 50 11 chr17 22031934 22032665 -73239986 + Lx3_Mus LINE L1 6047 6775 -234 3 753 423 0 0 0 chr17 22032665 22032712 -73239939 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 753 5811 111 50 11 chr17 22032712 22032907 -73239744 + Lx3_Mus LINE L1 6776 7007 -2 3 753 25166 124 36 12 chr17 22033363 22039595 -73233056 + L1_Mus1 LINE L1 177 6567 0 4 753 236 378 0 0 chr17 22039629 22039830 -73232821 + L1_Mur3 LINE L1 3771 3971 -1909 4 753 547 352 77 30 chr17 22040047 22040515 -73232136 + Lx8 LINE L1 6466 6955 -518 4 753 4424 98 54 33 chr17 22040738 22041473 -73231178 + RMER17A LTR ERVK 1 751 0 4 753 1600 210 35 43 chr17 22041605 22042097 -73230554 + L1_Mur3 LINE L1 4399 4886 -994 4 753 3336 204 15 61 chr17 22042594 22042856 -73229795 + L1_Mur3 LINE L1 4916 5135 -745 4 753 1057 86 0 0 chr17 22042856 22042995 -73229656 + B1_Mus1 SINE Alu 2 140 -8 4 753 305 24 24 0 chr17 22042995 22043037 -73229614 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 753 3336 204 15 61 chr17 22043037 22043685 -73228966 + L1_Mur3 LINE L1 5136 5784 -96 4 753 251 210 120 105 chr17 22044134 22044267 -73228384 + MT2B LTR ERVL 96 230 -371 4 753 299 302 62 39 chr17 22044156 22044205 -73228446 + ID_B1 SINE B4 42 224 0 4 753 472 246 54 0 chr17 22044205 22044335 -73228316 + B1_Mus1 SINE Alu 12 148 0 4 753 436 127 0 0 chr17 22044400 22044471 -73228180 + Lx3B LINE L1 6808 6878 -95 5 753 1789 133 42 6 chr17 22045993 22046304 -73226347 - Lx2 LINE L1 0 6997 6676 5 753 204 40 0 0 chr17 22047104 22047129 -73225522 + (T)n Simple_repeat Simple_repeat 1 25 0 5 753 386 253 61 39 chr17 22047129 22047310 -73225341 - RMER17C LTR ERVK -137 273 89 5 753 3553 189 89 20 chr17 22047931 22048116 -73224535 - L1_Mur3 LINE L1 -1304 4576 4395 5 753 1872 214 54 6 chr17 22048116 22048619 -73224032 - RLTR11A2 LTR ERVK 0 527 1 5 753 3553 189 89 20 chr17 22048619 22049430 -73223221 - L1_Mur3 LINE L1 -1486 4394 3511 5 753 37655 31 3 7 chr17 22049432 22055814 -73216837 - L1Md_T LINE L1 -1 6581 232 5 753 5980 104 14 1 chr17 22055813 22056756 -73215895 - L1Md_F LINE L1 -1357 4526 3572 5 753 14491 130 25 10 chr17 22058261 22061494 -73211157 - L1Md_F LINE L1 -2296 3587 307 5 753 1818 192 36 16 chr17 22061493 22061937 -73210714 - L1Md_F LINE L1 -5493 1026 574 5 753 234 246 0 0 chr17 22062131 22062188 -73210463 + (TTAGGG)n Simple_repeat Simple_repeat 1 57 0 5 753 271 301 48 0 chr17 22063695 22063778 -73208873 - URR1B DNA MER1_type -132 93 7 6 753 601 333 114 9 chr17 22063838 22064162 -73208489 - RMER15 LTR ERVL 0 575 218 6 753 998 162 4 2 chr17 22064525 22066079 -73206572 - MMSAT4 Satellite Satellite -69 1556 1 6 753 272 309 24 36 chr17 22066773 22066857 -73205794 - B1F1 SINE Alu -2 147 65 6 753 236 307 9 9 chr17 22067326 22067441 -73205210 - MurSatRep1 Unknown Unknown -1392 745 631 6 753 291 373 19 19 chr17 22067804 22067960 -73204691 + B3 SINE B2 61 216 0 6 753 272 317 12 0 chr17 22068788 22068870 -73203781 + B3 SINE B2 73 155 -61 6 753 425 239 11 22 chr17 22070915 22071005 -73201646 - URR1B DNA MER1_type -136 89 1 6 753 279 261 0 0 chr17 22071362 22071431 -73201220 + (TA)n Simple_repeat Simple_repeat 1 69 0 6 753 2324 135 14 6 chr17 22071582 22071947 -73200704 + RLTR9A LTR ERVK 1 368 0 6 753 339 328 133 56 chr17 22072269 22072607 -73200044 + L1M2 LINE L1 3641 4002 -2144 7 753 474 321 54 31 chr17 22072983 22073243 -73199408 + Lx8 LINE L1 6469 6734 -739 7 753 29 0 0 0 chr17 22074216 22074245 -73198406 + AT_rich Low_complexity Low_complexity 1 29 0 7 753 1113 74 0 39 chr17 22074245 22074399 -73198252 - B1_Mus1 SINE Alu 0 148 1 7 753 23 54 0 0 chr17 22074437 22074474 -73198177 + AT_rich Low_complexity Low_complexity 1 37 0 7 753 6779 78 23 3 chr17 22074535 22076039 -73196612 + L1_Mus1 LINE L1 5033 6567 0 7 753 2753 226 76 135 chr17 22076067 22076223 -73196428 - RLTR25B LTR ERVK -21 1007 867 7 753 188 35 35 0 chr17 22076223 22076252 -73196399 + (CAAA)n Simple_repeat Simple_repeat 4 33 0 7 753 2753 226 76 135 chr17 22076252 22077165 -73195486 - RLTR25B LTR ERVK -162 866 1 7 753 220 321 137 31 chr17 22077165 22077326 -73195325 - B3 SINE B2 -37 179 2 7 753 338 347 116 43 chr17 22077525 22078458 -73194193 + L1M2 LINE L1 3065 4065 -2078 7 753 469 330 10 10 chr17 22078616 22078818 -73193833 + Lx8 LINE L1 6466 6667 -806 8 753 190 56 56 0 chr17 22078822 22078858 -73193793 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 8 753 460 257 14 28 chr17 22080576 22080720 -73191931 + Lx6 LINE L1 5536 5677 -203 8 753 22 0 0 0 chr17 22080720 22080742 -73191909 + AT_rich Low_complexity Low_complexity 1 22 0 8 753 28172 104 13 5 chr17 22080743 22084952 -73187699 - L1_Mus1 LINE L1 -2 6565 2333 8 753 3048 69 2 8 chr17 22084952 22085348 -73187303 + MTA_Mm LTR MaLR 3 396 0 8 753 28172 126 8 51 chr17 22085348 22087020 -73185631 - L1_Mus1 LINE L1 -3551 2332 725 8 753 434 241 52 8 chr17 22087028 22087162 -73185489 - L1_Mus1 LINE L1 -5813 803 664 8 753 548 141 0 10 chr17 22087266 22087366 -73185285 + Lx6 LINE L1 5675 5773 -1687 8 753 5642 151 46 0 chr17 22087390 22088451 -73184200 - L1_Mur2 LINE L1 -1523 4354 3245 8 753 354 178 27 14 chr17 22088466 22088540 -73184111 + Lx2B LINE L1 6297 6371 -629 8 753 408 96 0 88 chr17 22088540 22088620 -73184031 + L1_Mus1 LINE L1 6491 6563 -4 8 753 230 324 9 28 chr17 22088620 22088666 -73183985 + Lx3B LINE L1 6376 6420 -553 8 753 588 121 0 0 chr17 22088671 22088762 -73183889 + (GGA)n Simple_repeat Simple_repeat 2 92 0 9 753 1670 213 164 2 chr17 22088762 22089237 -73183414 + Lx2B LINE L1 6380 6935 -41 8 753 672 212 80 62 chr17 22089241 22089620 -73183031 + Lx6 LINE L1 5739 6121 -1339 9 753 323 229 36 0 chr17 22089630 22089713 -73182938 + MERVK26-int LTR ERVK 1389 1474 -5445 9 753 300 363 77 23 chr17 22090174 22090394 -73182257 + L1M2 LINE L1 3794 4025 -2118 9 753 331 310 23 8 chr17 22090586 22090716 -73181935 + Lx8 LINE L1 6824 6955 -518 9 753 794 217 28 11 chr17 22091588 22091770 -73180881 - RMER10B LTR ERVL -20 378 194 9 753 204 125 0 0 chr17 22091774 22091806 -73180845 + (GGA)n Simple_repeat Simple_repeat 3 34 0 9 753 2954 186 42 31 chr17 22091806 22092394 -73180257 - RLTR17 LTR ERVK 0 692 98 9 753 1117 28 0 20 chr17 22092417 22092564 -73180087 + (GGA)n Simple_repeat Simple_repeat 2 145 0 9 753 1008 162 94 6 chr17 22092565 22092745 -73179906 - RMER10B LTR ERVL -202 196 1 9 753 1369 198 39 92 chr17 22093115 22093548 -73179103 + RMER17C LTR ERVK 1 410 0 9 753 246 162 39 39 chr17 22094545 22094622 -73178029 + L1_Mur3 LINE L1 2811 2887 -2993 1 753 8848 202 40 79 chr17 22094630 22097509 -73175142 + L1_Mur3 LINE L1 3006 5773 -107 1 753 207 69 0 0 chr17 22097932 22097961 -73174690 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 753 252 0 0 0 chr17 22099044 22099072 -73173579 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 753 306 0 0 0 chr17 22100523 22100557 -73172094 + (T)n Simple_repeat Simple_repeat 1 34 0 1 753 478 244 44 37 chr17 22102550 22102568 -73170083 - B1_Mus1 SINE Alu 0 148 135 1 753 207 0 0 0 chr17 22102568 22102591 -73170060 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 1 753 478 244 44 37 chr17 22102591 22102708 -73169943 - B1_Mus1 SINE Alu -14 134 12 1 753 242 322 0 75 chr17 22102651 22102745 -73169906 - B4A SINE B4 -140 152 66 1 753 311 274 169 45 chr17 22102746 22103036 -73169615 - L1M4 LINE L1 -3435 2711 2386 1 753 235 119 24 0 chr17 22103685 22103727 -73168924 - B1_Mus2 SINE Alu 0 147 105 1 753 21 36 0 0 chr17 22105251 22105279 -73167372 + AT_rich Low_complexity Low_complexity 1 28 0 1 753 10056 183 66 38 chr17 22105806 22108515 -73164136 - L1_Mur3 LINE L1 -90 5790 3006 1 753 422 182 55 33 chr17 22109860 22109951 -73162700 - RLTR23 LTR ERV1 -330 100 8 1 753 1502 121 46 0 chr17 22109977 22110258 -73162393 - MusHAL1 LINE L1 -926 1786 1493 1 753 17813 51 2 0 chr17 22110252 22113342 -73159309 - L1Md_F2 LINE L1 -5 6577 3482 1 753 207 0 0 0 chr17 22113342 22113365 -73159286 + (T)n Simple_repeat Simple_repeat 1 23 0 1 753 26983 116 14 14 chr17 22113390 22119211 -73153440 - L1_Mus2 LINE L1 -336 6230 414 1 753 404 301 97 41 chr17 22119211 22119478 -73153173 + RLTR22_Mur LTR ERVK 282 563 -1285 1 753 500 208 23 134 chr17 22119592 22119764 -73152887 - RLTR26 LTR ERVK 0 642 490 1 753 352 179 15 0 chr17 22119751 22119818 -73152833 - RLTR26 LTR ERVK -574 68 1 1 753 474 275 33 103 chr17 22119818 22120087 -73152564 + RLTR22_Mus LTR ERVK 637 886 -922 1 753 24 0 0 0 chr17 22120194 22120218 -73152433 + AT_rich Low_complexity Low_complexity 1 24 0 1 753 374 326 91 45 chr17 22120266 22120605 -73152046 + RLTR22_Mur LTR ERVK 1515 1848 0 1 753 433 196 11 11 chr17 22120605 22120697 -73151954 + ORR1B2 LTR MaLR 268 359 -8 1 753 875 150 20 46 chr17 22120701 22120897 -73151754 - L1_Mur2 LINE L1 -903 4974 4784 1 753 1279 234 88 3 chr17 22120892 22121256 -73151395 - L1_Mur2 LINE L1 -1671 4206 3812 1 753 779 113 16 16 chr17 22121259 22121385 -73151266 + ORR1A4 LTR MaLR 199 324 -5 1 753 472 373 14 39 chr17 22121396 22121675 -73150976 - Lx8 LINE L1 -708 6765 6494 1 753 2841 229 86 84 chr17 22122078 22122871 -73149780 + RMER13A LTR ERVK 1 794 -66 1 753 323 328 92 60 chr17 22122887 22123202 -73149449 - L1M4 LINE L1 -2181 3965 3641 1 753 248 217 0 32 chr17 22123671 22123733 -73148918 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 1 753 353 284 143 76 chr17 22124091 22124301 -73148350 + URR1B DNA MER1_type 2 225 0 1 753 736 181 97 23 chr17 22125787 22125962 -73146689 + ORR1B1 LTR MaLR 1 188 -141 1 753 2239 116 3 0 chr17 22125961 22126279 -73146372 - ORR1A2 LTR MaLR -8 319 1 1 753 941 145 7 0 chr17 22126279 22126426 -73146225 + ORR1B1 LTR MaLR 239 386 -8 1 753 402 356 24 24 chr17 22127268 22127432 -73145219 - B3 SINE B2 0 216 53 1 753 226 348 0 0 chr17 22127763 22127878 -73144773 + MurSatRep1 Unknown Unknown 631 745 -1392 1 753 25 51 0 0 chr17 22128164 22128203 -73144448 + AT_rich Low_complexity Low_complexity 1 39 0 1 753 893 136 62 47 chr17 22128372 22128565 -73144086 - Lx3C LINE L1 -3 6973 6778 1 753 754 128 0 0 chr17 22128529 22128646 -73144005 + Lx3C LINE L1 6694 6810 -166 1 753 220 328 0 0 chr17 22128664 22128722 -73143929 + B1_Mus2 SINE Alu 64 121 -26 1 753 998 191 3 3 chr17 22129426 22130618 -73142033 + MMSAT4 Satellite Satellite 1 1192 0 1 753 733 321 24 24 chr17 22131087 22131342 -73141309 + RMER15 LTR ERVL 225 479 -96 1 753 7113 146 48 3 chr17 22132858 22134063 -73138588 + Lx4A LINE L1 5800 7058 0 1 753 1207 130 18 44 chr17 22134533 22134759 -73137892 - Lx4A LINE L1 -222 6836 6617 1 753 823 113 0 0 chr17 22134752 22134885 -73137766 + L1_Mur2 LINE L1 2260 2392 -3485 1 753 288 0 0 0 chr17 22136419 22136451 -73136200 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 753 25825 122 46 22 chr17 22136535 22136941 -73135710 + L1_Mus2 LINE L1 527 950 -5616 1 753 607 155 13 10 chr17 22136941 22137067 -73135584 + B1_Mus1 SINE Alu 1 129 -18 1 753 25825 122 46 22 chr17 22137067 22142439 -73130212 + L1_Mus2 LINE L1 951 6565 -1 1 753 237 280 16 16 chr17 22143026 22143153 -73129498 - MMSAT4 Satellite Satellite -7 161 35 1 753 681 217 44 23 chr17 22143165 22143880 -73128771 - MMSAT4 Satellite Satellite 0 729 1 1 753 243 307 57 0 chr17 22144000 22144140 -73128511 - MMSAT4 Satellite Satellite 0 168 21 1 753 260 245 67 67 chr17 22144160 22144265 -73128386 - MMSAT4 Satellite Satellite -15 153 49 1 753 1103 173 100 11 chr17 22144697 22144775 -73127876 - L1_Mur2 LINE L1 -1763 4114 4036 1 753 1158 61 0 7 chr17 22144775 22144923 -73127728 - B1_Mm SINE Alu 0 147 1 1 753 1103 173 100 11 chr17 22144923 22145124 -73127527 - L1_Mur2 LINE L1 -1842 4035 3810 1 753 5867 191 13 26 chr17 22145121 22146560 -73126091 - L1_Mur2 LINE L1 -2358 3519 2100 1 753 411 198 99 0 chr17 22146562 22146663 -73125988 - L1_Mur2 LINE L1 -3896 1990 1880 1 753 347 144 65 105 chr17 22146878 22147002 -73125649 + Lx4A LINE L1 6940 7058 0 1 753 27 0 0 0 chr17 22147860 22147887 -73124764 + AT_rich Low_complexity Low_complexity 1 27 0 1 753 282 73 0 0 chr17 22147991 22148032 -73124619 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 753 1030 228 36 0 chr17 22148941 22149165 -73123486 + ORR1B1 LTR MaLR 163 394 0 1 753 1453 177 15 66 chr17 22150000 22150333 -73122318 - RMER6A LTR ERVK 0 756 441 1 753 1222 142 23 5 chr17 22150330 22150549 -73122102 + RLTR22_Mur LTR ERVK 339 561 -1287 1 753 26 0 0 0 chr17 22150782 22150808 -73121843 + AT_rich Low_complexity Low_complexity 1 26 0 1 754 288 0 0 0 chr17 22153228 22153260 -73119391 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 1 754 210 71 0 0 chr17 22155336 22155364 -73117287 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 1 754 22 0 0 0 chr17 22155540 22155562 -73117089 + AT_rich Low_complexity Low_complexity 1 22 0 1 754 1033 146 6 0 chr17 22155701 22155866 -73116785 + ORR1A2 LTR MaLR 1 166 -161 1 754 4426 130 9 86 chr17 22156022 22156898 -73115753 + RMER17D2 LTR ERVK 1 809 0 1 754 3273 144 8 41 chr17 22158502 22158628 -73114023 - RMER2 LTR ERV1 0 567 461 1 754 186 43 0 0 chr17 22158628 22158651 -73114000 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 754 3273 144 8 41 chr17 22158651 22159110 -73113541 - RMER2 LTR ERV1 -107 460 1 1 754 4646 103 8 72 chr17 22159123 22159926 -73112725 + RMER17A LTR ERVK 1 751 0 1 754 265 333 90 6 chr17 22160096 22160262 -73112389 + Lx8 LINE L1 7067 7246 -227 1 754 18801 83 16 4 chr17 22161039 22165232 -73107419 + L1Md_F LINE L1 578 5459 -424 1 754 450 0 0 0 chr17 22165781 22165831 -73106820 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 754 395 116 24 32 chr17 22168226 22168351 -73104300 + (CA)n Simple_repeat Simple_repeat 1 124 0 1 754 235 316 26 0 chr17 22169457 22169533 -73103118 - ID4 SINE ID -3 80 3 1 754 653 45 11 0 chr17 22171658 22171747 -73100904 + (TG)n Simple_repeat Simple_repeat 1 90 0 1 754 636 87 0 0 chr17 22175068 22175160 -73097491 + (CTG)n Simple_repeat Simple_repeat 1 92 0 1 754 21 0 0 0 chr17 22177997 22178018 -73094633 + AT_rich Low_complexity Low_complexity 1 21 0 1 754 411 287 32 11 chr17 22178735 22178919 -73093732 + B4 SINE B4 81 269 -23 1 754 198 150 0 0 chr17 22179012 22179052 -73093599 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 754 522 268 0 9 chr17 22179063 22179416 -73093235 + (CA)n Simple_repeat Simple_repeat 1 349 0 1 754 257 316 25 50 chr17 22179890 22180010 -73092641 + B4A SINE B4 25 141 -151 1 754 1113 201 9 0 chr17 22181404 22181628 -73091023 - L1_Mur2 LINE L1 -3463 2414 2189 1 754 413 289 93 45 chr17 22181741 22181987 -73090664 - L1_Mur2 LINE L1 -6322 764 507 1 754 9008 10 2 0 chr17 22182001 22183428 -73089223 - L1Md_A LINE L1 0 6582 5153 1 754 29 0 0 0 chr17 22184155 22184184 -73088467 + AT_rich Low_complexity Low_complexity 1 29 0 1 754 235 211 42 14 chr17 22185663 22185735 -73086916 + (CA)n Simple_repeat Simple_repeat 1 74 0 1 754 288 283 0 0 chr17 22185749 22185922 -73086729 + (CA)n Simple_repeat Simple_repeat 2 174 0 1 754 452 324 0 27 chr17 22185947 22186131 -73086520 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 754 288 53 0 0 chr17 22186145 22186183 -73086468 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 754 260 307 11 0 chr17 22189508 22189596 -73083055 + (CA)n Simple_repeat Simple_repeat 2 90 0 1 754 3334 111 19 19 chr17 22190579 22191101 -73081550 - L1_Mm LINE L1 -1113 4770 4249 1 754 1273 142 97 15 chr17 22191104 22191434 -73081217 + RMER17A2 LTR ERVK 154 510 -396 1 754 4477 156 78 14 chr17 22191451 22191867 -73080784 - RMER17A2 LTR ERVK -4 902 484 1 754 677 73 10 0 chr17 22191867 22191963 -73080688 + (GA)n Simple_repeat Simple_repeat 2 98 0 1 754 4477 156 78 14 chr17 22191963 22192394 -73080257 - RMER17A2 LTR ERVK -423 483 1 1 754 2147 86 0 0 chr17 22192394 22192697 -73079954 - L1_Mm LINE L1 -3981 1902 1600 1 754 3021 42 12 81 chr17 22192697 22193116 -73079535 + RLTR10 LTR ERVK 1 390 0 1 754 8107 43 5 2 chr17 22193116 22194082 -73078569 + RLTR10-int LTR ERVK 1 998 -989 1 754 373 271 31 8 chr17 22194146 22194276 -73078375 + RLTR10-int LTR ERVK 1462 1594 -5987 1 754 8980 15 0 4 chr17 22194358 22195357 -73077294 + RLTR10-int LTR ERVK 990 1984 -3 1 754 3021 42 12 81 chr17 22195359 22195778 -73076873 + RLTR10 LTR ERVK 1 390 0 1 754 3125 156 64 14 chr17 22195778 22196845 -73075806 - L1Md_F LINE L1 -4278 1605 468 1 754 3754 225 31 33 chr17 22197083 22197992 -73074659 + RMER13B LTR ERVK 2 908 0 1 754 530 277 46 0 chr17 22198019 22198149 -73074502 - MuRRS4-int LTR ERV1 -1100 3963 3828 1 754 297 0 0 0 chr17 22199399 22199432 -73073219 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1 754 479 248 0 66 chr17 22199432 22199543 -73073108 - PB1D9 SINE Alu -12 108 3 1 754 322 271 57 16 chr17 22199976 22200100 -73072551 - B1_Mur1 SINE Alu 0 149 21 1 754 2075 207 93 42 chr17 22201149 22201699 -73070952 - Lx5 LINE L1 0 7050 6473 1 754 3793 241 71 30 chr17 22201692 22202676 -73069975 - Lx5 LINE L1 -243 6807 5779 1 754 306 0 0 0 chr17 22203532 22203566 -73069085 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 754 597 336 11 11 chr17 22203591 22203853 -73068798 - RMER15 LTR ERVL -83 492 231 1 754 1177 151 15 8 chr17 22204293 22205020 -73067631 - MMSAT4 Satellite Satellite -7 732 1 1 754 965 154 1 1 chr17 22205035 22205491 -73067160 - MMSAT4 Satellite Satellite 0 456 1 1 754 301 303 0 33 chr17 22206192 22206284 -73066367 - B1F SINE Alu 0 149 61 1 754 264 330 0 0 chr17 22206731 22206849 -73065802 - MurSatRep1 Unknown Unknown -1392 745 628 1 754 34298 71 8 5 chr17 22208359 22213536 -73059115 + L1Md_F3 LINE L1 401 5585 -298 1 754 8083 53 2 5 chr17 22213537 22214536 -73058115 + L1Md_F3 LINE L1 5587 6582 -2 1 754 262 159 0 0 chr17 22216340 22216384 -73056267 - URR1B DNA MER1_type 0 225 182 1 754 316 263 53 0 chr17 22216483 22216559 -73056092 - URR1B DNA MER1_type -144 81 2 1 754 333 118 0 0 chr17 22218618 22218669 -73053982 + (A)n Simple_repeat Simple_repeat 1 51 0 1 754 522 335 69 24 chr17 22218869 22219202 -73053449 + Lx8 LINE L1 6481 6828 -645 2 754 290 339 32 43 chr17 22219783 22219968 -73052683 + Lx8 LINE L1 6469 6651 -822 2 754 259 337 136 11 chr17 22220302 22220479 -73052172 - B3 SINE B2 -4 212 14 2 754 1158 139 0 15 chr17 22220656 22220861 -73051790 - L1_Mm LINE L1 -1854 4029 3828 2 754 26 64 0 0 chr17 22220938 22220985 -73051666 + AT_rich Low_complexity Low_complexity 1 47 0 2 754 480 291 39 29 chr17 22222420 22222625 -73050026 - B3 SINE B2 -5 211 5 2 754 290 237 39 26 chr17 22222910 22222988 -73049663 - MTB_Mm LTR MaLR -138 269 191 2 754 359 209 26 113 chr17 22222999 22223150 -73049501 + B2_Mm2 SINE B2 56 193 -2 2 754 1086 102 0 26 chr17 22223307 22223458 -73049193 + B1_Mus1 SINE Alu 2 148 0 2 754 471 113 0 0 chr17 22223486 22223557 -73049094 + (GGAA)n Simple_repeat Simple_repeat 3 73 0 2 754 6611 113 14 18 chr17 22223592 22224438 -73048213 + Lx3_Mus LINE L1 6042 6893 -116 2 754 2597 84 75 45 chr17 22224438 22224837 -73047814 - IAPLTR2a LTR ERVK 0 411 1 2 754 6611 113 14 18 chr17 22224837 22224961 -73047690 + Lx3_Mus LINE L1 6894 7009 0 2 754 1856 219 36 13 chr17 22225361 22225838 -73046813 + L1_Mur3 LINE L1 4399 4886 -994 2 754 3767 213 9 43 chr17 22226333 22227234 -73045417 + L1_Mur3 LINE L1 4916 5785 -95 2 754 229 244 113 118 chr17 22227630 22227816 -73044835 + MT2B2 LTR ERVL 46 230 -354 2 754 250 301 108 74 chr17 22227705 22227881 -73044770 + B4 SINE B4 42 223 -69 2 754 457 240 62 0 chr17 22227754 22227883 -73044768 + B1_Mus1 SINE Alu 12 148 0 2 754 514 174 6 1 chr17 22227949 22228067 -73044584 + Lx3B LINE L1 6808 6928 -48 2 754 1179 88 0 7 chr17 22228768 22228916 -73043735 - B1_Mus2 SINE Alu 0 147 1 2 754 1589 218 62 62 chr17 22229234 22229641 -73043010 + RLTR19C LTR ERVK 26 439 -67 2 754 1151 92 0 0 chr17 22229641 22229783 -73042868 - B1_Mus1 SINE Alu -5 143 2 2 754 1589 218 62 62 chr17 22229783 22229829 -73042822 + RLTR19C LTR ERVK 440 479 -27 2 754 329 314 121 79 chr17 22229858 22230048 -73042603 + RLTR19C LTR ERVK 485 682 -33 2 754 1354 163 20 8 chr17 22230074 22230327 -73042324 - RMER6A LTR ERVK -109 647 392 2 754 4537 96 25 53 chr17 22230364 22231122 -73041529 - RMER17A LTR ERVK -14 737 1 2 754 1145 209 23 4 chr17 22231122 22231374 -73041277 - RMER6A LTR ERVK -358 398 142 2 754 3132 117 4 0 chr17 22231374 22231846 -73040805 - L1_Mm LINE L1 -1194 4689 4216 2 754 230 291 0 18 chr17 22232467 22232523 -73040128 + C-rich Low_complexity Low_complexity 1 55 0 2 754 661 255 25 34 chr17 22232717 22233327 -73039324 - MMSAT4 Satellite Satellite -20 604 1 2 754 5378 206 36 31 chr17 22233309 22234382 -73038269 - L1_Mur2 LINE L1 -2599 3278 2213 2 754 1232 82 0 0 chr17 22234382 22234529 -73038122 - B1_Mm SINE Alu 0 147 1 2 754 5378 206 36 31 chr17 22234529 22234685 -73037966 - L1_Mur2 LINE L1 -3665 2212 2053 2 754 777 84 0 0 chr17 22234685 22234804 -73037847 + (TG)n Simple_repeat Simple_repeat 1 119 0 2 754 5378 206 36 31 chr17 22234804 22234947 -73037704 - L1_Mur2 LINE L1 -3825 2052 1897 2 754 4169 167 37 21 chr17 22235149 22235878 -73036773 + Lx4A LINE L1 6315 7055 -3 2 754 27 0 0 0 chr17 22236732 22236759 -73035892 + AT_rich Low_complexity Low_complexity 1 27 0 2 754 588 62 0 0 chr17 22236869 22236950 -73035701 + (TG)n Simple_repeat Simple_repeat 2 82 0 2 754 1284 218 28 11 chr17 22237792 22238075 -73034576 + ORR1B1 LTR MaLR 107 394 0 2 754 1585 173 12 57 chr17 22238921 22239252 -73033399 - RMER6A LTR ERVK 0 756 441 2 754 1152 181 25 4 chr17 22239230 22239468 -73033183 + RLTR22_Mur LTR ERVK 319 561 -1287 2 754 25 0 0 0 chr17 22239701 22239726 -73032925 + AT_rich Low_complexity Low_complexity 1 25 0 2 754 1009 158 6 12 chr17 22241002 22241169 -73031482 + ORR1A2 LTR MaLR 1 166 -161 2 754 4952 131 22 25 chr17 22241324 22242135 -73030516 + RMER17D2 LTR ERVK 1 809 0 2 754 3477 144 23 14 chr17 22243728 22243759 -73028892 - RMER2 LTR ERV1 0 567 538 2 754 234 0 0 0 chr17 22243759 22243785 -73028866 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2 754 3477 144 23 14 chr17 22243785 22244315 -73028336 - RMER2 LTR ERV1 -30 537 1 2 754 2408 132 13 78 chr17 22244340 22244925 -73027726 + RMER17D LTR ERVK 26 526 -363 2 754 1577 112 51 42 chr17 22244926 22245233 -73027418 + RLTR13B1 LTR ERVK 1 304 -551 2 754 32924 59 1 4 chr17 22245236 22246949 -73025702 - MMERVK10C-int LTR ERVK -2710 4871 3163 2 754 3629 16 21 0 chr17 22246949 22247337 -73025314 - MTA_Mm LTR MaLR 0 396 1 2 754 9641 38 5 1 chr17 22247337 22248431 -73024220 - MTA_Mm-int LTR MaLR 0 1098 1 2 754 3629 16 21 0 chr17 22248431 22248819 -73023832 - MTA_Mm LTR MaLR 0 396 1 2 754 32924 59 1 4 chr17 22248819 22251116 -73021535 - MMERVK10C-int LTR ERVK -4419 3162 872 2 754 878 118 0 0 chr17 22251114 22251241 -73021410 - MMERVK10C-int LTR ERVK -7182 399 273 2 754 9542 24 0 0 chr17 22251241 22253010 -73019641 - L1Md_A LINE L1 0 6582 4814 2 754 1857 101 50 47 chr17 22253010 22253368 -73019283 - MMERVK10C-int LTR ERVK -7304 277 1 2 754 1946 67 51 18 chr17 22253368 22253643 -73019008 - RLTR10B LTR ERVK 0 292 9 2 754 285 28 0 0 chr17 22253643 22253679 -73018972 - RLTR10B LTR ERVK -256 36 1 2 754 235 213 16 0 chr17 22254042 22254103 -73018548 + L1_Mur3 LINE L1 1356 1417 -4463 2 754 355 358 24 19 chr17 22254701 22254912 -73017739 - B3 SINE B2 -3 213 2 2 754 255 340 75 12 chr17 22255268 22255429 -73017222 + Lx8 LINE L1 6464 6634 -839 2 754 196 72 17 67 chr17 22255445 22255505 -73017146 + A-rich Low_complexity Low_complexity 3 59 0 2 754 422 260 40 27 chr17 22255618 22255768 -73016883 + Lx8 LINE L1 6804 6955 -518 2 754 547 258 77 205 chr17 22255967 22256460 -73016191 + RLTR23 LTR ERV1 1 430 0 2 754 393 127 0 0 chr17 22256640 22256719 -73015932 + (TC)n Simple_repeat Simple_repeat 2 80 0 2 754 268 131 0 28 chr17 22256972 22257043 -73015608 + A-rich Low_complexity Low_complexity 2 70 0 2 754 9091 11 0 0 chr17 22257384 22258544 -73014107 - L1Md_T LINE L1 0 6582 5422 2 754 218 186 0 44 chr17 22258599 22258644 -73014007 + polypyrimidine Low_complexity Low_complexity 5 47 0 2 754 6887 104 3 1 chr17 22259195 22260145 -73012506 - L1_Mus2 LINE L1 -1 6565 5614 2 754 6391 117 35 1 chr17 22260140 22261121 -73011530 + L1_Mm LINE L1 3861 4874 -1009 2 754 542 204 82 22 chr17 22261121 22261256 -73011395 + RMER13A LTR ERVK 252 394 -466 2 754 1648 52 5 0 chr17 22262055 22262247 -73010404 - B2_Mm1a SINE B2 0 193 1 2 754 15457 66 7 15 chr17 22262248 22264980 -73007671 - L1Md_F2 LINE L1 -13 6569 3863 2 754 1158 87 44 5 chr17 22264982 22265275 -73007376 - RLTR1B LTR ERV1 -139 373 1 2 754 4620 65 50 40 chr17 22265275 22265933 -73006718 - RLTR1B-int LTR ERV1 0 3299 2635 2 754 6585 71 16 24 chr17 22265930 22266794 -73005857 - RLTR1B-int LTR ERV1 -1190 2109 1253 2 754 36729 65 2 2 chr17 22266898 22273088 -72999563 - L1Md_F2 LINE L1 0 6582 436 2 754 815 71 0 0 chr17 22273096 22273222 -72999429 - RLTR1B-int LTR ERV1 -2035 1264 1139 2 754 2798 101 38 40 chr17 22273189 22273760 -72998891 - RLTR1B-int LTR ERV1 -2310 1388 782 2 754 447 155 161 108 chr17 22273861 22273991 -72998660 - RLTR1B-int LTR ERV1 -2515 784 648 2 754 1861 125 40 29 chr17 22274032 22274482 -72998169 - RLTR1B-int LTR ERV1 -7253 303 1 2 754 1143 141 45 6 chr17 22274482 22274719 -72997932 - RLTR1B LTR ERV1 0 624 339 2 754 13444 110 11 2 chr17 22274719 22277163 -72995488 - L1Md_F LINE L1 -2745 3138 671 2 754 219 339 17 0 chr17 22277269 22277328 -72995323 - ID_B1 SINE B4 -93 131 72 2 754 353 276 55 23 chr17 22277734 22277878 -72994773 - B1F1 SINE Alu 0 149 1 2 754 1788 201 67 39 chr17 22278851 22279398 -72993253 - Lx5 LINE L1 -5 7053 6473 2 754 3322 245 72 34 chr17 22279391 22280351 -72992300 - Lx5 LINE L1 -243 6807 5812 2 754 414 0 0 0 chr17 22281235 22281281 -72991370 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 754 625 358 8 8 chr17 22281306 22281568 -72991083 - RMER15 LTR ERVL -83 492 231 2 94 1037 161 13 8 chr17 22282015 22282737 -72989914 - MMSAT4 Satellite Satellite -17 725 1 2 755 887 179 0 0 chr17 22282752 22283124 -72989527 - MMSAT4 Satellite Satellite 0 372 1 2 755 339 256 81 0 chr17 22287922 22288008 -72984643 - URR1A DNA MER1_type -132 94 2 2 755 402 355 110 35 chr17 22288768 22289313 -72983338 + L1M4 LINE L1 3523 4095 -2051 2 755 484 321 51 30 chr17 22289631 22289965 -72982686 + Lx8 LINE L1 6488 6828 -645 2 755 329 337 126 16 chr17 22291059 22291249 -72981402 - B3 SINE B2 -4 212 2 2 755 4721 60 0 0 chr17 22291414 22292001 -72980650 + L1Md_F2 LINE L1 5995 6581 -1 2 755 1011 120 0 45 chr17 22292014 22292214 -72980437 - L1_Mm LINE L1 -1855 4028 3838 2 755 27 62 0 0 chr17 22292302 22292350 -72980301 + AT_rich Low_complexity Low_complexity 1 48 0 2 755 402 295 35 25 chr17 22293791 22293989 -72978662 - B3 SINE B2 -12 204 5 2 755 290 211 38 38 chr17 22294274 22294353 -72978298 - MTB_Mm LTR MaLR -138 269 191 2 755 374 213 27 111 chr17 22294337 22294515 -72978136 + B2_Mm2 SINE B2 34 193 -2 2 755 1051 103 0 7 chr17 22294674 22294821 -72977830 + B1_Mus1 SINE Alu 3 148 0 2 755 575 51 0 12 chr17 22294854 22294934 -72977717 + (GAAA)n Simple_repeat Simple_repeat 2 80 0 2 755 6514 91 21 6 chr17 22294970 22295919 -72976732 + Lx3_Mus LINE L1 6047 7009 0 2 755 1596 225 36 13 chr17 22296326 22296803 -72975848 + L1_Mur3 LINE L1 4399 4886 -994 2 755 3508 205 7 48 chr17 22297295 22298203 -72974448 + L1_Mur3 LINE L1 4916 5785 -95 2 755 226 269 97 102 chr17 22298574 22298760 -72973891 + MT2B LTR ERVL 46 230 -371 2 755 307 288 73 50 chr17 22298649 22298698 -72973953 + ID_B1 SINE B4 42 224 0 2 755 516 231 54 0 chr17 22298698 22298828 -72973823 + B1_Mus1 SINE Alu 12 148 0 2 755 516 184 2 5 chr17 22298894 22299023 -72973628 + Lx3B LINE L1 6808 6934 -47 2 755 1068 82 7 7 chr17 22299714 22299861 -72972790 - B1_Mus2 SINE Alu 0 147 1 2 755 520 69 0 0 chr17 22299920 22299992 -72972659 + B1_Mus2 SINE Alu 76 147 0 2 755 340 189 43 22 chr17 22300714 22300806 -72971845 + L1_Rod LINE L1 592 685 -6487 2 755 1021 157 130 0 chr17 22300831 22301016 -72971635 + URR1B DNA MER1_type 1 209 -16 2 755 335 234 113 0 chr17 22301023 22301164 -72971487 + L1_Rod LINE L1 736 892 -6280 2 755 2224 59 0 0 chr17 22301472 22301810 -72970841 - L1_Mus1 LINE L1 0 6567 6289 2 755 1706 112 84 7 chr17 22302270 22302557 -72970094 - Lx2 LINE L1 -1 6996 6688 2 755 411 21 0 0 chr17 22303367 22303415 -72969236 + (TTTC)n Simple_repeat Simple_repeat 1 48 0 2 755 391 200 21 69 chr17 22303416 22303604 -72969047 - RMER17C LTR ERVK -136 274 96 2 755 2887 166 60 24 chr17 22304217 22304403 -72968248 - L1_Mur3 LINE L1 -1306 4574 4395 2 755 1892 210 54 6 chr17 22304403 22304906 -72967745 - RLTR11A2 LTR ERVK 0 527 1 2 755 2887 166 60 24 chr17 22304906 22305397 -72967254 - L1_Mur3 LINE L1 -1486 4394 3872 2 755 240 341 109 0 chr17 22305443 22305581 -72967070 - Lx8 LINE L1 -227 7246 7094 2 755 1151 75 0 0 chr17 22306138 22306284 -72966367 - B1_Mus2 SINE Alu 0 147 2 2 755 386 278 61 0 chr17 22306312 22306427 -72966224 - B1_Mur2 SINE Alu -1 148 27 2 755 372 311 50 11 chr17 22306483 22306662 -72965989 + MURVY-int LTR ERV1 3551 3736 -3865 2 755 2109 187 76 68 chr17 22307161 22307690 -72964961 + RMER16 LTR ERVK 1 533 0 3 755 1030 88 0 0 chr17 22308067 22308204 -72964447 + B1_Mm SINE Alu 1 137 -10 3 755 216 0 0 0 chr17 22308204 22308228 -72964423 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 755 538 273 8 9 chr17 22308390 22308589 -72964062 + MURVY-int LTR ERV1 4731 5107 -2671 2 755 3286 111 13 69 chr17 22308608 22308707 -72963944 + L1_Mus1 LINE L1 6064 6158 -409 3 755 1204 41 0 7 chr17 22308707 22308854 -72963797 + B1_Mm SINE Alu 2 147 0 3 755 3286 111 13 69 chr17 22308854 22309288 -72963363 + L1_Mus1 LINE L1 6159 6567 0 3 755 451 283 0 0 chr17 22309347 22309476 -72963175 + MuLV-int LTR ERV1 7091 7257 -349 3 755 1595 211 59 21 chr17 22309789 22310161 -72962490 + RLTR19C LTR ERVK 26 411 -95 3 755 1049 106 0 0 chr17 22310196 22310338 -72962313 - B1_Mus1 SINE Alu -5 143 2 3 755 356 297 120 88 chr17 22310413 22310605 -72962046 + RLTR19C LTR ERVK 485 682 -33 3 755 1389 167 15 4 chr17 22310631 22310890 -72961761 - RMER6A LTR ERVK -109 647 386 3 755 2161 145 25 59 chr17 22310922 22311397 -72961254 - RMER17A LTR ERVK -14 737 279 3 755 6826 72 14 0 chr17 22311398 22312279 -72960372 - RLTR13B1 LTR ERVK 0 893 1 3 755 519 122 24 0 chr17 22312293 22312375 -72960276 - ETnERV3-int LTR ERVK -28 5780 5697 3 755 798 214 51 5 chr17 22312381 22312597 -72960054 + L1Md_F2 LINE L1 204 429 -6295 3 755 29739 74 1 1 chr17 22312622 22316811 -72955840 + L1Md_F2 LINE L1 1398 5586 -297 3 755 8128 41 2 0 chr17 22316812 22317793 -72954858 + L1Md_F2 LINE L1 5588 6570 -12 3 755 7261 120 26 21 chr17 22317793 22317905 -72954746 - ETnERV3-int LTR ERVK -97 5711 5606 3 755 1821 40 4 9 chr17 22317905 22318131 -72954520 - L1Md_F3 LINE L1 -14 6570 6346 3 755 7261 114 25 16 chr17 22318131 22319401 -72953250 - ETnERV3-int LTR ERVK -1339 5905 4468 3 755 423 0 0 0 chr17 22319401 22319448 -72953203 + (GA)n Simple_repeat Simple_repeat 1 47 0 3 755 471 35 0 0 chr17 22319448 22319505 -72953146 + (GAA)n Simple_repeat Simple_repeat 3 59 0 3 755 2467 106 26 26 chr17 22319505 22319923 -72952728 - RMER17A LTR ERVK -333 418 1 3 755 1166 195 35 12 chr17 22319923 22320174 -72952477 - RMER6A LTR ERVK -358 398 142 3 755 2863 113 11 0 chr17 22320174 22320643 -72952008 - L1_Mm LINE L1 -1194 4689 4216 3 755 6147 104 0 215 chr17 22323094 22323704 -72948947 - L1_Mm LINE L1 -1654 4229 3633 3 755 2401 90 3 9 chr17 22323704 22324041 -72948610 - IAPLTR1a_Mm LTR ERVK -2 335 1 3 755 6147 104 0 215 chr17 22324041 22324221 -72948430 - L1_Mm LINE L1 -1654 3632 3455 3 755 1463 53 26 11 chr17 22324221 22324411 -72948240 - B2_Mm2 SINE B2 -1 194 2 3 755 6147 104 0 215 chr17 22324411 22324927 -72947724 - L1_Mm LINE L1 -2429 3454 2939 3 755 3420 81 6 14 chr17 22324922 22325424 -72947227 + L1_Mus2 LINE L1 5668 6165 -401 3 755 612 247 23 31 chr17 22325878 22326413 -72946238 - MMSAT4 Satellite Satellite -7 530 1 3 755 4594 192 37 81 chr17 22326405 22327544 -72945107 - L1_Mur2 LINE L1 -2606 3271 2213 3 755 1073 110 7 0 chr17 22327544 22327690 -72944961 - B1_Mus2 SINE Alu 0 147 1 3 755 4594 192 37 81 chr17 22327690 22327845 -72944806 - L1_Mur2 LINE L1 -3665 2212 2053 3 755 501 92 0 0 chr17 22327845 22327921 -72944730 + (TG)n Simple_repeat Simple_repeat 1 76 0 3 755 4594 192 37 81 chr17 22327921 22328064 -72944587 - L1_Mur2 LINE L1 -3825 2052 1897 3 755 1415 152 63 7 chr17 22328265 22328536 -72944115 + Lx4A LINE L1 6315 6600 -458 3 755 8024 180 25 22 chr17 22328535 22330302 -72942349 - L1_Mur2 LINE L1 -269 5608 3836 3 755 313 211 9 71 chr17 22330318 22330430 -72942221 - Lx4A LINE L1 0 7058 6954 3 755 3646 167 43 60 chr17 22330429 22330941 -72941710 - L1_Mur2 LINE L1 -1929 3948 3450 3 755 746 58 19 0 chr17 22330941 22331044 -72941607 + (TTTC)n Simple_repeat Simple_repeat 2 106 0 3 755 3646 167 43 60 chr17 22331044 22331506 -72941145 - L1_Mur2 LINE L1 -2428 3449 2991 3 755 211 150 32 32 chr17 22331507 22331569 -72941082 + (TTA)n Simple_repeat Simple_repeat 1 62 0 3 755 2652 179 23 2 chr17 22331569 22332055 -72940596 - Lx4A LINE L1 -3 7055 6560 3 755 460 331 56 0 chr17 22332412 22332590 -72940061 - B3 SINE B2 -4 212 25 3 755 4524 149 53 70 chr17 22333070 22333992 -72938659 - RMER17A2 LTR ERVK 0 906 1 3 755 910 144 78 101 chr17 22334194 22334411 -72938240 - RLTR23 LTR ERV1 -2 428 217 3 755 201 74 0 0 chr17 22334427 22334454 -72938197 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 755 2645 28 0 47 chr17 22334697 22335035 -72937616 + RLTRETN_Mm LTR ERVK 1 322 0 3 755 627 331 8 8 chr17 22335831 22336078 -72936573 - RMER15 LTR ERVL -89 486 240 3 755 1142 148 4 2 chr17 22336537 22338397 -72934254 - MMSAT4 Satellite Satellite -17 1864 1 3 755 290 326 0 33 chr17 22339097 22339189 -72933462 - B1F SINE Alu 0 149 61 3 755 21 0 0 0 chr17 22340812 22340833 -72931818 + AT_rich Low_complexity Low_complexity 1 21 0 3 755 231 343 0 0 chr17 22343583 22343682 -72928969 + L1_Rod LINE L1 3872 3970 -1877 3 755 363 326 126 16 chr17 22344584 22344774 -72927877 - B3 SINE B2 -4 212 2 3 755 1064 109 0 30 chr17 22344938 22345136 -72927515 - L1_Mur1 LINE L1 -1854 4032 3841 3 755 407 284 42 56 chr17 22346732 22346945 -72925706 - B3 SINE B2 -2 214 5 3 755 345 279 15 15 chr17 22347261 22347450 -72925201 + L1VL1 LINE L1 87 382 -6040 3 755 409 262 16 8 chr17 22347508 22347635 -72925016 + L1_Mus1 LINE L1 675 802 -5814 3 755 22897 157 7 40 chr17 22347644 22350350 -72922301 + L1_Mus1 LINE L1 725 3375 -3192 3 755 452 125 0 27 chr17 22350350 22350424 -72922227 + LTRIS2 LTR ERV1 414 485 -79 3 755 22897 157 7 40 chr17 22350424 22353681 -72918970 + L1_Mus1 LINE L1 3376 6567 0 3 755 540 115 0 46 chr17 22353702 22353811 -72918840 + Lx LINE L1 6551 6654 0 3 755 336 264 0 0 chr17 22353878 22353950 -72918701 - MTC LTR MaLR -137 284 213 3 755 342 243 33 125 chr17 22353981 22354154 -72918497 + B2_Mm1t SINE B2 60 193 -2 3 755 1005 116 0 7 chr17 22354315 22354463 -72918188 + B1_Mus1 SINE Alu 2 148 0 3 755 1283 19 7 0 chr17 22354498 22354652 -72917999 + (GGAA)n Simple_repeat Simple_repeat 3 157 0 3 755 816 9 37 0 chr17 22354660 22354768 -72917883 + (GAAA)n Simple_repeat Simple_repeat 4 115 0 3 755 6429 102 21 4 chr17 22354818 22355765 -72916886 + Lx3_Mus LINE L1 6047 7009 0 3 755 234 257 76 77 chr17 22356209 22356417 -72916234 + L1_Mur3 LINE L1 3797 3998 -2142 3 755 452 347 84 38 chr17 22356672 22357089 -72915562 + Lx8 LINE L1 6498 6933 -540 3 755 1521 265 47 26 chr17 22357363 22357569 -72915082 + L1_Mur3 LINE L1 4345 4547 -1596 3 755 228 86 0 0 chr17 22357569 22357604 -72915047 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 3 755 1521 220 42 13 chr17 22357604 22357964 -72914687 + L1_Mur3 LINE L1 4516 4885 -995 3 755 3424 208 14 32 chr17 22358422 22359308 -72913343 + L1_Mur3 LINE L1 4916 5785 -95 3 755 236 242 113 98 chr17 22359754 22359887 -72912764 + MT2B LTR ERVL 96 230 -371 3 755 275 322 57 34 chr17 22359776 22359953 -72912698 + ID_B1 SINE B4 42 222 -2 3 755 489 237 51 22 chr17 22359820 22359958 -72912693 + B1_Mus2 SINE Alu 6 147 0 3 755 532 134 0 10 chr17 22360022 22360120 -72912531 + Lx3B LINE L1 6808 6904 -69 3 755 302 320 103 33 chr17 22360483 22360725 -72911926 + L1M2 LINE L1 4528 4786 -1357 3 755 1720 138 40 10 chr17 22361976 22362277 -72910374 - Lx2 LINE L1 0 6997 6688 3 755 419 191 21 68 chr17 22363112 22363303 -72909348 - RMER17C LTR ERVK -133 277 96 3 755 3845 204 62 27 chr17 22363903 22364086 -72908565 - L1_Mur3 LINE L1 -1306 4574 4395 3 755 1896 214 52 6 chr17 22364086 22364590 -72908061 - RLTR11A2 LTR ERVK 0 527 1 3 755 3845 204 62 27 chr17 22364590 22365470 -72907181 - L1_Mur3 LINE L1 -1486 4394 3472 3 755 3808 106 7 7 chr17 22365470 22366032 -72906619 - L1Md_F2 LINE L1 0 6582 6021 3 755 3845 204 62 27 chr17 22366032 22366071 -72906580 - L1_Mur3 LINE L1 -2409 3471 3433 3 755 1106 156 15 15 chr17 22366100 22366302 -72906349 + RMER16 LTR ERVK 332 533 0 3 755 759 277 59 32 chr17 22366848 22367107 -72905544 + RLTR6-int LTR ERV1 4902 5163 -2615 3 755 225 0 0 0 chr17 22367107 22367132 -72905519 + (CAA)n Simple_repeat Simple_repeat 3 27 0 3 755 759 295 70 33 chr17 22367132 22367291 -72905360 + RLTR6-int LTR ERV1 4969 5248 -2530 3 755 2884 25 0 0 chr17 22367375 22367701 -72904950 + IAPLTR3 LTR ERVK 1 326 0 3 755 57057 23 2 1 chr17 22367701 22374490 -72898161 + IAPLTR3-int LTR ERVK 1 6801 -20 3 755 2929 18 0 0 chr17 22374490 22374816 -72897835 + IAPLTR3 LTR ERVK 1 326 0 3 755 360 317 0 0 chr17 22374951 22375074 -72897577 + RLTR6-int LTR ERV1 5399 5521 -2035 3 755 300 327 117 19 chr17 22374981 22375143 -72897508 + RLTR19-int LTR ERVK 4366 4543 -1594 3 755 6806 156 4 33 chr17 22375238 22376536 -72896115 - Lx4A LINE L1 -245 6813 5521 3 755 3023 109 0 0 chr17 22376535 22377012 -72895639 + L1_Mm LINE L1 4936 5412 -471 3 755 4301 144 29 35 chr17 22377013 22377918 -72894733 + L1_Mus1 LINE L1 307 1205 -5411 3 755 35328 36 0 46 chr17 22377926 22382341 -72890310 + L1_Mus1 LINE L1 1172 5586 -297 3 755 7957 59 0 0 chr17 22382341 22383337 -72889314 + L1Md_T LINE L1 5587 6582 0 3 755 35328 63 4 24 chr17 22383337 22384545 -72888106 + L1_Mus1 LINE L1 5587 6566 -1 3 755 449 244 2 19 chr17 22384589 22384718 -72887933 + MuLV-int LTR ERV1 7154 7263 -343 3 755 1542 242 56 40 chr17 22385050 22385450 -72887201 + RLTR19C LTR ERVK 26 442 -64 3 755 1144 69 14 0 chr17 22385450 22385595 -72887056 - B1_Mus1 SINE Alu 0 148 2 3 755 1542 242 56 40 chr17 22385595 22385641 -72887010 + RLTR19C LTR ERVK 443 479 -27 3 755 296 326 121 79 chr17 22385670 22385860 -72886791 + RLTR19C LTR ERVK 485 682 -33 3 755 1179 192 19 4 chr17 22385886 22386142 -72886509 - RMER6A LTR ERVK -109 647 388 3 755 4092 102 12 140 chr17 22386176 22387021 -72885630 - RMER17A LTR ERVK -14 737 1 3 755 1156 209 24 0 chr17 22387021 22387272 -72885379 - RMER6A LTR ERVK -358 398 142 3 755 5569 99 5 2 chr17 22387272 22388139 -72884512 - L1_Mm LINE L1 -1194 4689 3821 3 755 1486 202 12 57 chr17 22388497 22388828 -72883823 - RMER6A LTR ERVK 0 756 441 3 755 1145 195 44 11 chr17 22388817 22389087 -72883564 + RLTR22_Mur LTR ERVK 331 609 -1239 3 755 26 0 0 0 chr17 22389273 22389299 -72883352 + AT_rich Low_complexity Low_complexity 1 26 0 3 755 995 157 30 11 chr17 22390581 22390777 -72881874 + ORR1A2 LTR MaLR 1 221 -125 3 755 4329 138 71 7 chr17 22390902 22391662 -72880989 + RMER17D2 LTR ERVK 1 809 0 3 755 1505 143 21 52 chr17 22393283 22393314 -72879337 - RMER2 LTR ERV1 0 567 539 3 755 180 77 0 0 chr17 22393314 22393340 -72879311 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 755 1505 143 21 52 chr17 22393340 22393595 -72879056 - RMER2 LTR ERV1 -29 538 290 3 755 31899 87 16 7 chr17 22393601 22399679 -72872972 - L1Md_F2 LINE L1 -3 6579 447 3 755 1865 152 9 12 chr17 22399679 22399998 -72872653 - RMER2 LTR ERV1 -249 318 1 3 755 4395 134 17 24 chr17 22400011 22400767 -72871884 + RMER17A LTR ERVK 1 751 0 3 755 268 338 92 6 chr17 22400939 22401103 -72871548 + Lx8 LINE L1 7069 7246 -227 3 755 195 42 0 0 chr17 22401900 22401924 -72870727 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 755 492 335 28 23 chr17 22402722 22402936 -72869715 - B3 SINE B2 0 216 2 3 755 10895 102 7 26 chr17 22403122 22404963 -72867688 + MMETn-int LTR ERVK 3219 4844 0 3 755 1661 128 27 66 chr17 22404963 22405298 -72867353 + RLTRETN_Mm LTR ERVK 1 322 0 3 755 10382 135 32 6 chr17 22405298 22405628 -72867023 - L1Md_F LINE L1 -2054 3829 3488 3 755 243 0 0 0 chr17 22405628 22405655 -72866996 + (TTG)n Simple_repeat Simple_repeat 1 27 0 3 755 10382 135 32 6 chr17 22405655 22406241 -72866410 - L1Md_F LINE L1 -2396 3487 2890 3 755 859 106 7 14 chr17 22406241 22406384 -72866267 + (TTTC)n Simple_repeat Simple_repeat 2 143 0 3 755 10382 135 32 6 chr17 22406384 22407351 -72865300 - L1Md_F LINE L1 -2994 2889 1901 3 755 816 174 25 31 chr17 22407351 22407511 -72865140 + RMER17A2 LTR ERVK 1 159 -747 3 755 461 97 0 0 chr17 22407511 22407583 -72865068 - MusHAL1 LINE L1 -2393 319 248 3 755 1925 140 252 29 chr17 22407583 22408031 -72864620 - RLTR6_Mm LTR ERV1 -70 584 37 3 755 2962 161 37 14 chr17 22408143 22409112 -72863539 - L1Md_F LINE L1 -4429 1454 509 3 755 1322 190 8 39 chr17 22409352 22409609 -72863042 + RMER13B LTR ERVK 1 249 -659 4 755 499 252 48 8 chr17 22409986 22410110 -72862541 - ETnERV2-int LTR ERVK -204 7202 7074 4 755 3037 216 54 17 chr17 22410111 22410756 -72861895 + RMER13B LTR ERVK 240 908 0 4 755 511 261 46 0 chr17 22410783 22410913 -72861738 - MuRRS4-int LTR ERV1 -1100 3963 3828 4 755 279 54 0 0 chr17 22412161 22412198 -72860453 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 4 755 500 245 0 45 chr17 22412198 22412309 -72860342 - PB1D9 SINE Alu -12 108 3 4 755 374 266 56 17 chr17 22412728 22412872 -72859779 - B1F1 SINE Alu 0 149 1 4 756 1754 225 83 38 chr17 22413843 22414398 -72858253 - Lx5 LINE L1 0 7050 6471 4 756 3307 244 92 42 chr17 22414380 22415174 -72857477 - Lx5 LINE L1 -222 6828 6006 4 756 3279 46 2 0 chr17 22415174 22415567 -72857084 + MTA_Mm LTR MaLR 1 394 -2 4 756 3307 244 92 42 chr17 22415567 22415791 -72856860 - Lx5 LINE L1 -1045 6005 5772 4 756 450 0 0 0 chr17 22415791 22415841 -72856810 + (TAAA)n Simple_repeat Simple_repeat 1 50 0 4 756 3307 244 92 42 chr17 22415841 22415898 -72856753 - Lx5 LINE L1 -1279 5771 5699 4 756 8249 194 28 131 chr17 22415868 22418234 -72854417 - L1_Mur1 LINE L1 -315 5571 3449 4 756 627 14 0 0 chr17 22418234 22418306 -72854345 + (TTTC)n Simple_repeat Simple_repeat 3 74 0 4 756 8249 194 28 131 chr17 22418306 22418808 -72853843 - L1_Mur1 LINE L1 -2438 3448 3000 4 756 220 145 48 16 chr17 22418809 22418872 -72853779 + (TTA)n Simple_repeat Simple_repeat 1 65 0 4 756 2468 181 33 20 chr17 22418872 22419362 -72853289 - Lx4A LINE L1 -3 7055 6560 4 756 430 328 66 16 chr17 22419716 22419899 -72852752 - B3 SINE B2 0 216 25 4 756 4340 164 34 82 chr17 22420380 22421332 -72851319 - RMER17A2 LTR ERVK 0 906 1 4 756 902 174 69 114 chr17 22421525 22421771 -72850880 - RLTR23 LTR ERV1 0 430 196 4 756 333 0 0 0 chr17 22422760 22422797 -72849854 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 756 769 311 16 8 chr17 22422819 22423075 -72849576 - RMER15 LTR ERVL -78 497 240 4 756 1063 140 5 2 chr17 22423609 22425489 -72847162 - MMSAT4 Satellite Satellite -74 1885 1 4 756 290 326 0 33 chr17 22426189 22426281 -72846370 - B1F SINE Alu 0 149 61 4 756 355 306 82 64 chr17 22430173 22430393 -72842258 - URR1B DNA MER1_type 0 225 2 4 756 2209 124 6 14 chr17 22430768 22431120 -72841531 - L1_Mus2 LINE L1 -2 6564 6216 4 756 335 359 102 30 chr17 22432660 22433133 -72839518 + L1M4 LINE L1 3503 4003 -2143 4 756 279 348 42 24 chr17 22433526 22433694 -72838957 + Lx8 LINE L1 6481 6651 -822 4 756 260 344 61 35 chr17 22433705 22433934 -72838717 - Tigger1 DNA MER2_type -456 1962 1728 4 756 284 219 16 0 chr17 22434061 22434125 -72838526 + L1Md_F LINE L1 654 718 -5801 4 756 15730 127 18 31 chr17 22434122 22436802 -72835849 + L1_Mus1 LINE L1 637 3318 -2568 4 756 423 176 0 26 chr17 22436802 22436878 -72835773 + LTRIS2 LTR ERV1 412 485 -79 4 756 15730 127 18 31 chr17 22436878 22437514 -72835137 + L1_Mus1 LINE L1 3319 3956 -1930 4 756 2853 6 3 0 chr17 22437514 22437835 -72834816 + RLTRETN_Mm LTR ERVK 1 322 0 4 756 19752 25 0 7 chr17 22437835 22440285 -72832366 + MMETn-int LTR ERVK 1 2435 -2409 4 756 12697 97 8 17 chr17 22440285 22443016 -72829635 + L1_Mus1 LINE L1 3853 6570 0 4 756 486 135 0 46 chr17 22443037 22443146 -72829505 + Lx LINE L1 6551 6654 0 4 756 374 253 0 0 chr17 22443210 22443285 -72829366 - MTC LTR MaLR -135 286 212 4 756 327 252 22 96 chr17 22443350 22443486 -72829165 + B2_Mm2 SINE B2 68 193 -2 4 756 958 136 0 7 chr17 22443647 22443795 -72828856 + B1_Mus1 SINE Alu 2 148 0 4 756 237 305 73 70 chr17 22443832 22444051 -72828600 - RMER17A LTR ERVK -325 426 205 4 756 6453 100 19 1 chr17 22444051 22444998 -72827653 + Lx3_Mus LINE L1 6046 7009 0 4 756 237 305 73 70 chr17 22444998 22445120 -72827531 - RMER17A LTR ERVK -547 204 84 4 756 471 340 124 40 chr17 22445264 22445690 -72826961 + L1M2 LINE L1 3585 4046 -2097 4 756 431 350 86 40 chr17 22445905 22446301 -72826350 + Lx8 LINE L1 6498 6911 -562 4 756 1583 220 40 17 chr17 22446694 22446807 -72825844 + L1_Mur3 LINE L1 4399 4515 -1365 4 756 215 61 30 0 chr17 22446807 22446840 -72825811 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 4 756 1583 220 40 17 chr17 22446840 22447203 -72825448 + L1_Mur3 LINE L1 4516 4886 -994 4 756 3537 206 6 39 chr17 22447700 22448600 -72824051 + L1_Mur3 LINE L1 4916 5785 -95 4 756 242 300 86 99 chr17 22448968 22449190 -72823461 + MT2B LTR ERVL 46 264 -337 4 756 285 294 73 50 chr17 22449044 22449093 -72823558 + ID_B1 SINE B4 42 224 0 4 756 495 239 54 0 chr17 22449093 22449223 -72823428 + B1_Mus1 SINE Alu 12 148 0 4 756 532 135 5 11 chr17 22449281 22449397 -72823254 + Lx3B LINE L1 6808 6925 -51 4 756 27 62 0 0 chr17 22449407 22449455 -72823196 + AT_rich Low_complexity Low_complexity 1 48 0 4 756 1720 132 43 10 chr17 22451186 22451485 -72821166 - Lx2 LINE L1 -1 6996 6688 4 756 437 183 21 69 chr17 22452324 22452512 -72820139 - RMER17C LTR ERVK -136 274 96 4 756 3858 206 62 24 chr17 22453111 22453294 -72819357 - L1_Mur3 LINE L1 -1306 4574 4395 4 756 1903 214 52 6 chr17 22453294 22453798 -72818853 - RLTR11A2 LTR ERVK 0 527 1 4 756 3858 206 62 24 chr17 22453798 22454674 -72817977 - L1_Mur3 LINE L1 -1486 4394 3472 4 756 4092 84 0 11 chr17 22454674 22455240 -72817411 - L1Md_F2 LINE L1 -2 6580 6021 4 756 3858 206 62 24 chr17 22455240 22455279 -72817372 - L1_Mur3 LINE L1 -2409 3471 3433 4 756 1154 164 5 15 chr17 22455308 22455512 -72817139 + RMER16 LTR ERVK 332 533 0 4 756 780 277 60 21 chr17 22456058 22456313 -72816338 + RLTR6-int LTR ERV1 4902 5163 -2615 4 756 279 0 0 0 chr17 22456313 22456344 -72816307 + (CAA)n Simple_repeat Simple_repeat 3 33 0 4 756 780 309 67 17 chr17 22456344 22456547 -72816104 + RLTR6-int LTR ERV1 5164 5248 -2530 4 756 360 317 0 0 chr17 22456716 22456839 -72815812 + RLTR6-int LTR ERV1 5399 5521 -2035 4 756 300 327 117 19 chr17 22456746 22456908 -72815743 + RLTR19-int LTR ERVK 4366 4543 -1594 4 756 6729 159 4 35 chr17 22457003 22458303 -72814348 - Lx4A LINE L1 -245 6813 5521 4 756 2227 116 3 0 chr17 22458302 22458665 -72813986 + L1_Mm LINE L1 4936 5299 -584 4 756 35915 24 2 60 chr17 22458665 22463824 -72808827 + L1_Mus1 LINE L1 462 5586 -297 4 756 8456 35 0 0 chr17 22463824 22464817 -72807834 + L1Md_T LINE L1 5587 6579 -3 4 756 35915 52 3 33 chr17 22464817 22466114 -72806537 + L1_Mus1 LINE L1 5587 6567 0 4 756 449 244 2 19 chr17 22466160 22466289 -72806362 + MuLV-int LTR ERV1 7154 7263 -343 4 756 1453 231 63 16 chr17 22466620 22466986 -72805665 + RLTR19C LTR ERVK 26 408 -98 4 756 999 81 0 7 chr17 22467018 22467155 -72805496 - B1_Mm SINE Alu 0 147 12 4 756 2373 200 113 23 chr17 22467159 22467892 -72804759 - MYSERV6-int LTR ERVK -164 8795 7997 4 756 266 254 0 0 chr17 22467920 22467983 -72804668 - RMER15 LTR ERVL -96 479 417 4 756 664 224 0 36 chr17 22468663 22468974 -72803677 - MMSAT4 Satellite Satellite -27 299 1 4 756 724 184 18 18 chr17 22468987 22469178 -72803473 - MMSAT4 Satellite Satellite 0 191 1 4 756 1484 168 15 15 chr17 22470098 22470424 -72802227 - L1_Mur2 LINE L1 -1763 4114 3789 4 756 6323 194 24 44 chr17 22470398 22472054 -72800597 - L1_Mur2 LINE L1 -2358 3519 1897 4 756 4025 176 17 29 chr17 22472256 22473009 -72799642 + Lx4A LINE L1 6315 7058 0 4 756 1126 72 0 0 chr17 22473283 22473422 -72799229 + B1_Mm SINE Alu 3 141 -6 4 756 231 36 0 0 chr17 22474002 22474030 -72798621 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 4 756 27 0 0 0 chr17 22474064 22474091 -72798560 + AT_rich Low_complexity Low_complexity 1 27 0 4 756 665 332 108 9 chr17 22474868 22475193 -72797458 - RMER15 LTR ERVL -1 574 218 4 756 184 222 51 89 chr17 22475316 22475395 -72797256 - L3 LINE CR1 -3193 1296 1221 4 756 1107 155 7 4 chr17 22475556 22476697 -72795954 - MMSAT4 Satellite Satellite -61 1143 1 4 756 243 375 0 59 chr17 22477416 22477501 -72795150 - B1F1 SINE Alu -24 125 46 4 756 320 373 37 31 chr17 22478355 22478546 -72794105 + B3 SINE B2 25 216 0 4 756 273 119 0 0 chr17 22479373 22479415 -72793236 - B1_Mus2 SINE Alu 0 147 106 4 756 388 238 11 45 chr17 22481494 22481582 -72791069 - URR1A DNA MER1_type -141 85 1 4 756 251 273 0 0 chr17 22481938 22482004 -72790647 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 4 756 346 344 100 39 chr17 22482468 22482922 -72789729 + L1M2 LINE L1 3638 4123 -2023 4 756 183 80 0 0 chr17 22483079 22483104 -72789547 + (T)n Simple_repeat Simple_repeat 1 25 0 4 756 1277 27 0 0 chr17 22483104 22483251 -72789400 - B1_Mm SINE Alu 0 147 1 4 756 467 337 54 25 chr17 22483370 22483650 -72789001 + Lx8 LINE L1 6467 6754 -719 4 756 237 348 61 39 chr17 22484269 22484580 -72788071 - Tigger1 DNA MER2_type -409 2009 1692 4 756 23 0 0 0 chr17 22484633 22484656 -72787995 + AT_rich Low_complexity Low_complexity 1 23 0 4 756 2606 223 102 135 chr17 22484681 22484900 -72787751 - RLTR25B LTR ERVK 0 1028 794 4 756 1607 37 16 0 chr17 22484900 22485090 -72787561 + B2_Mm1a SINE B2 1 193 0 4 756 2606 223 102 135 chr17 22485090 22485931 -72786720 - RLTR25B LTR ERVK -235 793 3 4 756 315 343 73 33 chr17 22486598 22486872 -72785779 + L1M2 LINE L1 3794 4078 -2065 4 756 366 312 47 0 chr17 22487277 22487405 -72785246 - Lx8 LINE L1 -518 6955 6822 4 756 448 315 49 5 chr17 22487832 22488036 -72784615 - B3 SINE B2 -2 214 2 4 756 306 0 0 0 chr17 22488479 22488513 -72784138 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 756 264 108 123 0 chr17 22490174 22490239 -72782412 + L1_Mur3 LINE L1 2816 2888 -2992 4 756 9259 204 45 36 chr17 22490236 22492983 -72779668 + L1_Mur3 LINE L1 2998 5767 -113 4 756 5662 152 45 0 chr17 22493013 22494059 -72778592 - L1_Mur2 LINE L1 -1523 4354 3262 4 756 343 299 35 29 chr17 22494678 22494850 -72777801 + L1_Rod LINE L1 3798 3970 -1877 4 756 3455 59 13 20 chr17 22494980 22495430 -72777221 + L1_Mus1 LINE L1 6121 6567 0 4 756 322 326 21 7 chr17 22495500 22495645 -72777006 + Lx8 LINE L1 6803 6949 -524 4 756 609 311 5 16 chr17 22496525 22496711 -72775940 - RMER10B LTR ERVL -21 377 194 4 756 183 156 0 0 chr17 22496711 22496743 -72775908 + GA-rich Low_complexity Low_complexity 3 34 0 4 756 3134 196 26 7 chr17 22496743 22497327 -72775324 - RLTR17 LTR ERVK 0 692 98 4 756 1049 170 104 9 chr17 22497343 22497563 -72775088 - RMER10B LTR ERVL -157 241 1 4 756 207 0 0 0 chr17 22497960 22497983 -72774668 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 756 204 217 0 48 chr17 22498678 22498741 -72773910 + (CGGGG)n Simple_repeat Simple_repeat 5 64 0 4 756 220 179 0 0 chr17 22498701 22498740 -72773911 + G-rich Low_complexity Low_complexity 1 39 0 4 756 4739 113 16 5 chr17 22499263 22500000 -72772651 - L1_Mus4 LINE L1 -7 6629 5885 4 756 1640 65 9 0 chr17 22500000 22500215 -72772436 - Lx LINE L1 -770 5884 5668 1 756 1230 41 0 0 chr17 22500709 22500855 -72771796 - B1_Mm SINE Alu 0 147 2 2 756 2593 94 5 25 chr17 22500888 22501292 -72771359 + RLTR9D LTR ERVK 7 402 -1 3 756 26 0 0 0 chr17 22501727 22501753 -72770898 + AT_rich Low_complexity Low_complexity 1 26 0 4 756 1330 155 24 16 chr17 22501995 22502250 -72770401 - RLTR1 LTR ERV1 0 624 368 5 756 3745 178 111 48 chr17 22502374 22503047 -72769604 - RLTR22_Mur LTR ERVK -797 1051 313 6 756 1587 37 0 0 chr17 22503047 22503235 -72769416 - B2_Mm1a SINE B2 -4 189 2 7 756 3745 178 111 48 chr17 22503235 22503550 -72769101 - RLTR22_Mur LTR ERVK -1536 312 1 6 756 213 39 0 0 chr17 22504686 22504712 -72767939 + (T)n Simple_repeat Simple_repeat 1 26 0 8 756 505 82 0 0 chr17 22504744 22504817 -72767834 - B1_Mur4 SINE Alu 0 150 78 9 756 268 222 0 53 chr17 22504750 22504826 -72767825 - ID_B1 SINE B4 -6 218 147 1 756 715 320 68 74 chr17 22504982 22505485 -72767166 - Lx8 LINE L1 -522 6951 6452 1 756 648 48 0 0 chr17 22506005 22506089 -72766562 + (GA)n Simple_repeat Simple_repeat 1 84 0 1 756 22 0 0 0 chr17 22506926 22506948 -72765703 + AT_rich Low_complexity Low_complexity 1 22 0 1 756 406 328 53 15 chr17 22507049 22507315 -72765336 + Tigger1 DNA MER2_type 1734 2009 -409 1 756 21 36 0 0 chr17 22507315 22507343 -72765308 + AT_rich Low_complexity Low_complexity 1 28 0 1 756 338 247 78 0 chr17 22508021 22508098 -72764553 + URR1B DNA MER1_type 2 84 -141 1 756 414 264 52 45 chr17 22510112 22510267 -72762384 - B3 SINE B2 0 216 61 1 756 241 220 78 60 chr17 22510278 22510394 -72762257 + MMSAT4 Satellite Satellite 37 154 -14 1 756 228 325 9 9 chr17 22510627 22510742 -72761909 + MurSatRep1 Unknown Unknown 631 745 -1392 1 756 318 326 0 0 chr17 22511202 22511288 -72761363 + B1F2 SINE Alu 64 149 0 2 756 1032 102 0 20 chr17 22511476 22511626 -72761025 + B1_Mus1 SINE Alu 2 148 0 2 756 1075 177 5 3 chr17 22512114 22513546 -72759105 + MMSAT4 Satellite Satellite 1 1434 0 2 756 261 232 35 35 chr17 22513810 22513895 -72758756 + RMER15 LTR ERVL 1 85 -490 2 756 311 370 34 7 chr17 22513959 22514106 -72758545 + RMER15 LTR ERVL 243 393 -182 2 756 297 75 0 0 chr17 22514335 22514375 -72758276 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 756 377 313 80 67 chr17 22514912 22515224 -72757427 - L1MD LINE L1 -2390 5605 5290 2 756 3460 197 25 35 chr17 22515298 22515487 -72757164 + Lx4B LINE L1 1861 2047 -3830 2 756 246 62 0 0 chr17 22515487 22515519 -72757132 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 756 3460 197 25 35 chr17 22515519 22516169 -72756482 + Lx4B LINE L1 2048 2692 -3185 2 756 2070 196 97 69 chr17 22516169 22516718 -72755933 - RMER19B LTR ERVK -335 567 4 2 756 5635 175 45 2 chr17 22516719 22517717 -72754934 + Lx4A LINE L1 5921 6961 -97 2 756 404 244 0 56 chr17 22517692 22517818 -72754833 + Lx4B LINE L1 3365 3483 -2394 2 756 17012 93 22 12 chr17 22517834 22520998 -72751653 + L1Md_F2 LINE L1 503 3696 -2187 3 756 7082 86 12 9 chr17 22520965 22521976 -72750675 + L1Md_F2 LINE L1 4572 5585 -298 3 756 7226 85 7 7 chr17 22521977 22522970 -72749681 + L1Md_F2 LINE L1 5587 6579 -3 3 756 2307 186 32 18 chr17 22522998 22523503 -72749148 + Lx4B LINE L1 3478 3989 -1888 2 756 4131 164 74 26 chr17 22523506 22524373 -72748278 - RMER12 LTR ERVK -414 908 1 3 756 6216 182 42 14 chr17 22524374 22525799 -72746852 + Lx4B LINE L1 5376 6842 -216 2 756 2020 217 96 36 chr17 22525796 22525951 -72746700 + Lx5 LINE L1 6486 6640 -410 3 756 2800 81 12 62 chr17 22525951 22526371 -72746280 + MTB LTR MaLR 2 400 0 3 756 2020 217 96 36 chr17 22526371 22526745 -72745906 + Lx5 LINE L1 6641 7047 -3 3 756 285 330 0 9 chr17 22527503 22527611 -72745040 + RMER15 LTR ERVL 260 366 -209 3 756 1807 216 11 98 chr17 22527611 22527693 -72744958 + MTC LTR MaLR 1 80 -341 3 756 2066 66 0 0 chr17 22527693 22527951 -72744700 + L1_Mus1 LINE L1 6303 6560 -7 3 756 1598 40 8 82 chr17 22527948 22528191 -72744460 + L1Md_F3 LINE L1 6359 6583 -1 3 756 1807 216 11 98 chr17 22528191 22528291 -72744360 + MTC LTR MaLR 81 147 -274 3 756 1663 135 12 65 chr17 22528291 22528631 -72744020 - RLTRETN_Mm LTR ERVK 0 322 1 3 756 1807 216 11 98 chr17 22528631 22528907 -72743744 + MTC LTR MaLR 148 419 -2 3 756 396 247 34 0 chr17 22528945 22529034 -72743617 + RMER15 LTR ERVL 431 522 -53 3 756 249 57 0 0 chr17 22529876 22529911 -72742740 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 3 756 225 278 0 0 chr17 22530831 22530885 -72741766 - B4A SINE B4 -153 139 86 4 756 35235 47 0 3 chr17 22531345 22536699 -72735952 + L1Md_T LINE L1 154 5589 -297 4 756 8458 34 0 0 chr17 22536699 22537695 -72734956 + L1Md_T LINE L1 5590 6585 0 4 756 615 127 0 10 chr17 22538211 22538314 -72734337 - BC1_Mm scRNA scRNA -48 104 3 4 756 234 229 0 153 chr17 22538258 22538330 -72734321 - ZP3AR Satellite Satellite -119 93 33 4 756 660 295 20 20 chr17 22538620 22538824 -72733827 - B3 SINE B2 -12 204 1 4 756 21 71 0 0 chr17 22539284 22539326 -72733325 + AT_rich Low_complexity Low_complexity 1 42 0 4 756 289 280 52 34 chr17 22539472 22539720 -72732931 - L1MA4 LINE L1 -366 5931 5683 4 756 1312 85 17 0 chr17 22539799 22539976 -72732675 + B2_Mm2 SINE B2 2 181 -14 4 756 513 66 0 0 chr17 22539976 22540052 -72732599 - L1Md_F2 LINE L1 -6 6576 6501 4 756 759 326 71 62 chr17 22540219 22540798 -72731853 + Lx8 LINE L1 6544 7127 -346 4 756 7570 93 11 0 chr17 22540914 22542552 -72730099 - L1_Mus1 LINE L1 -112 6455 4799 5 756 6832 76 8 0 chr17 22542902 22543788 -72728863 + RLTR13B1 LTR ERVK 1 893 0 5 757 230 244 59 82 chr17 22544947 22545032 -72727619 - Tigger16b DNA Tigger -145 192 110 5 757 1328 164 68 48 chr17 22545021 22545343 -72727308 + RLTR46 LTR ERVK 25 368 -17 5 757 353 256 46 11 chr17 22545426 22545513 -72727138 + B3 SINE B2 1 90 -126 5 757 32 26 0 0 chr17 22545609 22545648 -72727003 + AT_rich Low_complexity Low_complexity 1 39 0 5 757 9118 91 38 1 chr17 22546282 22547561 -72725090 + Lx3B LINE L1 5645 6970 -3 5 757 772 274 25 5 chr17 22547799 22548001 -72724650 + B3 SINE B2 1 206 -10 5 757 239 335 100 18 chr17 22548137 22548307 -72724344 - MIRb SINE MIR -1 267 84 5 757 183 28 54 27 chr17 22548362 22548399 -72724252 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 5 757 637 348 27 112 chr17 22550063 22550438 -72722213 + ORR1D2 LTR MaLR 1 343 -27 6 757 226 339 70 21 chr17 22550595 22550782 -72721869 + Lx8 LINE L1 6781 6976 -497 6 757 1005 105 28 7 chr17 22551125 22551269 -72721382 - B1_Mus1 SINE Alu 0 148 2 6 757 36 0 0 0 chr17 22552744 22552780 -72719871 + AT_rich Low_complexity Low_complexity 1 36 0 6 757 559 280 33 28 chr17 22554567 22554780 -72717871 + B3 SINE B2 2 215 -1 6 757 352 365 50 7 chr17 22554886 22555187 -72717464 + Tigger1 DNA MER2_type 1734 2047 -371 6 757 602 289 30 5 chr17 22556522 22556720 -72715931 + B3 SINE B2 2 204 -12 6 757 298 355 22 0 chr17 22556998 22557136 -72715515 - B1_Mur1 SINE Alu -8 141 1 6 757 568 305 14 5 chr17 22557155 22557366 -72715285 - B3 SINE B2 -1 215 3 6 757 252 148 0 0 chr17 22557580 22557641 -72715010 + (T)n Simple_repeat Simple_repeat 1 61 0 6 757 226 217 101 0 chr17 22557668 22557737 -72714914 - L1_Mm LINE L1 -1631 4252 4177 7 757 469 320 78 49 chr17 22557815 22558019 -72714632 - B3 SINE B2 -3 213 4 7 757 329 184 26 13 chr17 22558563 22558640 -72714011 - L1MEg LINE L1 -4699 1385 1308 7 757 3366 175 84 37 chr17 22559325 22560180 -72712471 + L1_Mur3 LINE L1 3682 4576 -1304 7 757 201 238 0 0 chr17 22561423 22561465 -72711186 + G-rich Low_complexity Low_complexity 4 45 0 7 757 2085 75 158 64 chr17 22561820 22562193 -72710458 - RLTR9E LTR ERVK 0 409 2 7 757 1483 178 12 28 chr17 22562332 22562655 -72709996 + L1_Mur3 LINE L1 3972 4289 -1591 7 757 1721 163 26 10 chr17 22562665 22563055 -72709596 - L1_Mur3 LINE L1 -2405 3475 3080 7 757 291 171 39 13 chr17 22563057 22563134 -72709517 - L1_Mur3 LINE L1 -2992 2888 2810 7 757 1719 163 25 118 chr17 22564383 22564822 -72707829 + RMER10B LTR ERVL 1 398 0 7 757 1197 141 16 0 chr17 22565616 22565808 -72706843 - B2_Mm2 SINE B2 0 195 1 7 757 418 294 129 5 chr17 22565867 22566069 -72706582 - Lx8 LINE L1 -518 6955 6729 8 757 253 200 18 0 chr17 22566144 22566199 -72706452 - L1M3 LINE L1 -2142 3998 3943 8 757 466 332 66 35 chr17 22567158 22567355 -72705296 + B3 SINE B2 14 216 0 8 757 396 0 0 0 chr17 22567366 22567410 -72705241 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 8 757 246 341 67 22 chr17 22567491 22567716 -72704935 + Tigger1 DNA MER2_type 1734 1968 -450 8 757 2533 166 44 32 chr17 22567748 22568280 -72704371 + RLTR31_Mur LTR ERVK 61 553 0 8 757 305 304 86 7 chr17 22568284 22568423 -72704228 + Tigger1 DNA MER2_type 1989 2138 -280 6 757 4257 41 16 0 chr17 22569266 22569777 -72702874 - MURVY-LTR LTR ERV1 0 519 1 8 757 509 221 18 132 chr17 22571848 22572015 -72700636 - B1_Mur4 SINE Alu 0 150 3 8 757 1371 80 21 0 chr17 22572047 22572234 -72700417 - B2_Mm2 SINE B2 -3 192 2 8 757 389 329 36 18 chr17 22572298 22572518 -72700133 - Lx8 LINE L1 -611 6862 6639 8 757 1036 297 40 6 chr17 22572519 22572848 -72699803 - ORR1D2 LTR MaLR -25 345 6 9 757 23 0 0 0 chr17 22573102 22573125 -72699526 + AT_rich Low_complexity Low_complexity 1 23 0 9 757 29623 101 16 7 chr17 22573952 22577270 -72695381 - L1_Mus2 LINE L1 -2 6564 3183 9 757 186 43 0 0 chr17 22577270 22577293 -72695358 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 9 757 29623 108 22 13 chr17 22577293 22580073 -72692578 - L1_Mus2 LINE L1 -2701 3182 407 9 757 16064 119 30 35 chr17 22580097 22581829 -72690822 - L1_Mur2 LINE L1 -960 4917 3139 9 757 369 0 0 0 chr17 22581829 22581870 -72690781 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 9 757 16064 119 30 35 chr17 22581870 22583010 -72689641 - L1_Mur2 LINE L1 -2739 3138 2062 9 757 637 147 132 7 chr17 22583018 22583162 -72689489 - RMER12B LTR ERVK -931 473 312 9 757 1978 175 3 29 chr17 22583572 22583949 -72688702 + ORR1B2 LTR MaLR 1 367 0 9 757 348 218 0 13 chr17 22584763 22584842 -72687809 + ORR1B2 LTR MaLR 266 343 -24 9 757 1322 186 4 13 chr17 22584842 22585081 -72687570 + ORR1A4 LTR MaLR 85 321 -8 9 757 491 359 37 24 chr17 22585087 22585384 -72687267 - Lx8 LINE L1 -704 6769 6469 1 757 315 365 35 15 chr17 22585767 22585970 -72686681 - L1M2 LINE L1 -2142 4001 3795 1 757 424 215 0 24 chr17 22586597 22586721 -72685930 + (TATG)n Simple_repeat Simple_repeat 2 122 0 1 757 438 20 0 0 chr17 22586721 22586772 -72685879 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 757 409 291 117 66 chr17 22587112 22587325 -72685326 + URR1B DNA MER1_type 2 225 0 1 757 22 0 0 0 chr17 22588553 22588575 -72684076 + AT_rich Low_complexity Low_complexity 1 22 0 1 757 191 61 30 0 chr17 22588575 22588608 -72684043 + (TATAA)n Simple_repeat Simple_repeat 5 38 0 1 757 242 339 0 0 chr17 22590436 22590551 -72682100 + MurSatRep1 Unknown Unknown 631 745 -1392 1 757 1052 171 5 2 chr17 22591776 22592970 -72679681 + MMSAT4 Satellite Satellite 1 1197 -1 1 757 831 312 67 33 chr17 22593394 22593725 -72678926 + RMER15 LTR ERVL 218 559 -16 1 757 366 309 0 0 chr17 22593798 22593879 -72678772 + URR1B DNA MER1_type 1 81 -144 1 757 8732 170 74 8 chr17 22594869 22596210 -72676441 + L1_Mur2 LINE L1 3828 5274 -603 1 757 180 0 0 0 chr17 22596210 22596230 -72676421 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1 757 8732 170 74 8 chr17 22596230 22596527 -72676124 + L1_Mur2 LINE L1 5275 5586 -291 1 757 2279 165 107 25 chr17 22596527 22597013 -72675638 + RLTR11A LTR ERVK 3 528 0 1 757 8732 170 74 8 chr17 22597013 22597213 -72675438 + L1_Mur2 LINE L1 5587 5788 -89 1 757 519 222 69 70 chr17 22597232 22597601 -72675050 + L1VL4 LINE L1 448 806 -5813 1 757 13106 123 22 6 chr17 22597610 22599722 -72672929 + L1VL4 LINE L1 729 2867 -1050 1 757 778 61 0 34 chr17 22599722 22599841 -72672810 + (GAAA)n Simple_repeat Simple_repeat 3 117 0 1 757 13106 156 20 47 chr17 22599841 22600620 -72672031 + L1VL4 LINE L1 2865 3343 -574 1 757 7713 67 0 4 chr17 22600620 22601620 -72671031 + L1Md_F2 LINE L1 5587 6582 0 1 757 11056 217 18 106 chr17 22601620 22602734 -72669917 + L1VL4 LINE L1 3330 4434 -1449 1 757 19717 65 1 3 chr17 22602730 22605872 -72666779 + L1Md_F3 LINE L1 640 3729 -2154 1 757 34115 54 15 4 chr17 22605870 22611456 -72661195 + L1Md_T LINE L1 1 5588 -298 1 757 8602 34 0 0 chr17 22611457 22612453 -72660198 + L1Md_T LINE L1 5590 6585 0 1 757 15141 54 1 0 chr17 22612453 22614325 -72658326 + L1Md_F3 LINE L1 3713 5586 -297 1 757 7883 55 4 1 chr17 22614325 22615306 -72657345 + L1Md_F3 LINE L1 5587 6570 -14 1 757 9275 111 13 8 chr17 22615334 22617452 -72655199 + L1_Mus2 LINE L1 4427 6565 -1 1 757 5058 207 76 16 chr17 22617470 22618629 -72654022 + Lx4B LINE L1 5782 7010 -48 1 757 369 0 0 0 chr17 22618642 22618683 -72653968 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 1 757 1353 234 140 18 chr17 22618686 22619121 -72653530 + Lx5 LINE L1 6556 7043 -7 1 757 29 60 0 15 chr17 22619143 22619184 -72653467 + AT_rich Low_complexity Low_complexity 1 41 0 1 757 983 78 21 0 chr17 22619184 22619325 -72653326 + L1_Mus2 LINE L1 6423 6566 0 1 757 29 60 0 15 chr17 22619325 22619351 -72653300 + AT_rich Low_complexity Low_complexity 1 26 0 1 757 321 357 45 10 chr17 22619551 22619749 -72652902 - Lx8 LINE L1 -357 7116 6912 1 757 18270 81 34 8 chr17 22619919 22623192 -72649459 - L1VL4 LINE L1 -4 3555 194 1 757 2439 182 111 48 chr17 22623720 22624482 -72648169 + RLTR13C1 LTR ERVK 3 918 -65 1 757 3017 21 0 0 chr17 22624482 22624819 -72647832 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 757 2439 162 123 29 chr17 22624819 22624840 -72647811 + RLTR13C1 LTR ERVK 919 934 -49 1 757 56763 22 9 6 chr17 22624843 22631245 -72641406 + IAPEz-int LTR ERVK 57 6481 0 1 757 3017 21 0 0 chr17 22631245 22631582 -72641069 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 757 374 143 14 14 chr17 22631582 22631653 -72640998 + RLTR13C1 LTR ERVK 913 983 0 1 757 1585 198 85 6 chr17 22632573 22632938 -72639713 + ORR1B1 LTR MaLR 1 394 0 1 757 319 296 93 25 chr17 22633021 22633243 -72639408 + Lx9 LINE L1 6321 6536 -1108 1 757 867 70 0 0 chr17 22634053 22634168 -72638483 + (GAAA)n Simple_repeat Simple_repeat 3 117 0 1 757 234 308 37 0 chr17 22634812 22634919 -72637732 - L1M1 LINE L1 -376 5927 5817 1 757 189 0 0 0 chr17 22634920 22634941 -72637710 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 757 1065 80 0 7 chr17 22634941 22635080 -72637571 - B1_Mus2 SINE Alu -9 138 1 1 757 372 282 44 26 chr17 22635342 22635455 -72637196 - RSINE1 SINE B4 -48 117 3 1 757 446 290 130 66 chr17 22635459 22635771 -72636880 - L1M4 LINE L1 -2471 3675 3313 1 757 1312 113 0 5 chr17 22635771 22635966 -72636685 - B2_Mm2 SINE B2 0 195 2 1 757 318 290 130 67 chr17 22635966 22636210 -72636441 - L1M4 LINE L1 -2831 3312 3081 1 757 26 30 0 0 chr17 22636210 22636243 -72636408 + AT_rich Low_complexity Low_complexity 1 33 0 1 757 14014 86 11 21 chr17 22636811 22639095 -72633556 - L1VL2 LINE L1 -635 2980 723 1 757 3508 18 5 0 chr17 22639095 22639489 -72633162 - MTA_Mm LTR MaLR 0 396 1 1 757 9290 33 4 1 chr17 22639489 22640584 -72632067 - MTA_Mm-int LTR MaLR 0 1098 1 1 757 3508 18 5 0 chr17 22640584 22640978 -72631673 - MTA_Mm LTR MaLR 0 396 1 1 757 5680 95 28 28 chr17 22640978 22641493 -72631158 - L1VL2 LINE L1 -5613 722 202 1 757 243 0 0 0 chr17 22644688 22644715 -72627936 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 757 903 181 32 5 chr17 22646603 22646792 -72625859 - URR1A DNA MER1_type 0 226 33 1 757 217 246 0 14 chr17 22647410 22647484 -72625167 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 757 387 0 0 0 chr17 22647485 22647528 -72625123 + (TCTA)n Simple_repeat Simple_repeat 2 44 0 1 757 188 232 0 35 chr17 22647649 22647707 -72624944 - L3 LINE CR1 -2095 2394 2339 1 757 4881 102 50 15 chr17 22648068 22648802 -72623849 - L1_Mus4 LINE L1 0 6636 5877 1 757 256 185 30 15 chr17 22648863 22648929 -72623722 - RLTR13D3 LTR ERVK -65 1049 983 1 757 239 108 0 0 chr17 22649210 22649247 -72623404 - B2_Mm2 SINE B2 -157 38 2 1 757 495 118 89 16 chr17 22649738 22649838 -72622813 - L1_Mus4 LINE L1 -754 5882 5744 1 757 714 121 0 0 chr17 22650363 22650479 -72622172 + (TCCC)n Simple_repeat Simple_repeat 3 118 0 1 757 282 247 25 25 chr17 22651395 22651474 -72621177 - RMER12 LTR ERVK -144 1178 1100 1 757 3125 182 39 31 chr17 22651636 22652429 -72620222 - RLTR22_Mur LTR ERVK -1049 799 1 1 757 694 170 30 2 chr17 22656593 22656745 -72615906 - RMER19A LTR ERVK 0 737 449 1 757 4411 137 65 21 chr17 22656787 22657633 -72615018 - RLTR13D6 LTR ERVK -19 883 1 1 757 362 271 16 9 chr17 22657644 22657752 -72614899 - RMER19A LTR ERVK -162 575 371 1 757 1443 225 112 119 chr17 22657752 22658628 -72614023 + MurERV4_19-int LTR ERVK 4894 5763 -17 1 757 1057 110 7 0 chr17 22659299 22659445 -72613206 + B1_Mus1 SINE Alu 2 148 0 1 757 524 56 14 0 chr17 22659450 22659522 -72613129 + (GA)n Simple_repeat Simple_repeat 2 74 0 1 757 239 297 40 0 chr17 22659668 22659742 -72612909 + ZP3AR Satellite Satellite 6 82 -130 1 757 695 61 0 10 chr17 22659702 22659801 -72612850 + BC1_Mm scRNA scRNA 1 98 -54 1 757 299 261 33 43 chr17 22659982 22660074 -72612577 + PB1D10 SINE Alu 27 117 0 1 757 3000 91 51 12 chr17 22660212 22660704 -72611947 - MusHAL1 LINE L1 -1789 923 413 1 757 906 122 115 0 chr17 22660704 22660843 -72611808 - L1VL2 LINE L1 -5844 491 337 1 757 2852 196 79 19 chr17 22660884 22661566 -72611085 + RMER19B LTR ERVK 7 729 -173 1 757 3650 201 30 139 chr17 22661566 22661872 -72610779 - L1_Mur2 LINE L1 -1720 4160 3863 1 757 5044 123 28 14 chr17 22661872 22662666 -72609985 - Lx LINE L1 -1 6653 5849 1 757 4075 185 33 48 chr17 22662666 22663671 -72608980 - L1_Mur2 LINE L1 -1900 3977 2992 1 757 19695 96 5 4 chr17 22663663 22667115 -72605536 - L1Md_F2 LINE L1 -3 6579 3122 1 757 1330 127 33 17 chr17 22667115 22667356 -72605295 + L1_Mus1 LINE L1 6323 6567 0 1 757 243 176 0 0 chr17 22667639 22667690 -72604961 + T-rich Low_complexity Low_complexity 1 51 0 1 757 1625 37 0 0 chr17 22667706 22667896 -72604755 - B2_Mm1t SINE B2 -3 190 1 1 757 720 135 9 0 chr17 22667944 22668055 -72604596 - RMER19C LTR ERVK -499 112 1 1 757 494 231 18 27 chr17 22668236 22668474 -72604177 - ORR1C2 LTR MaLR -5 379 1 1 757 456 250 8 8 chr17 22668474 22668591 -72604060 - ORR1C2-int LTR MaLR 0 1370 1254 1 757 25438 82 8 1 chr17 22668642 22672990 -72599661 - L1Md_F LINE L1 -1147 4736 357 1 758 3922 75 8 9 chr17 22675582 22676110 -72596541 - L1_Mus1 LINE L1 0 6567 6041 1 758 3184 92 7 3 chr17 22676111 22676717 -72595934 + L1_Mus1 LINE L1 5418 6025 -542 1 758 10613 196 38 8 chr17 22678088 22680472 -72592179 - L1_Mur2 LINE L1 -684 5193 2739 1 758 1828 32 5 0 chr17 22680480 22680698 -72591953 + L1Md_F2 LINE L1 5368 5586 -297 1 758 8281 40 1 0 chr17 22680698 22681693 -72590958 + L1Md_F2 LINE L1 5587 6582 0 1 758 4831 237 29 20 chr17 22681693 22682952 -72589699 + Lx2B LINE L1 5728 6998 -2 1 758 1129 237 142 63 chr17 22682954 22683337 -72589314 + RLTR21 LTR ERVK 729 1170 -402 1 758 486 120 0 0 chr17 22683337 22683412 -72589239 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 758 1129 280 81 71 chr17 22683412 22684029 -72588622 + RLTR21 LTR ERVK 1052 1572 0 1 758 21 36 0 0 chr17 22684377 22684405 -72588246 + AT_rich Low_complexity Low_complexity 1 28 0 1 758 2545 163 24 9 chr17 22685933 22686397 -72586254 + RLTR31B_Mm LTR ERVK 1 471 -86 1 758 4538 111 14 42 chr17 22687413 22688136 -72584515 - Lx3_Mus LINE L1 -182 6827 6125 1 758 774 153 61 12 chr17 22688137 22688302 -72584349 + Lx3_Mus LINE L1 6829 7001 -8 1 758 30670 101 24 1 chr17 22688323 22693594 -72579057 + L1Md_F3 LINE L1 191 5585 -298 1 758 8002 38 13 0 chr17 22693595 22694566 -72578085 + L1Md_F3 LINE L1 5587 6570 -14 1 758 4058 50 0 0 chr17 22695308 22695804 -72576847 + L1_Mm LINE L1 5288 5783 -100 1 758 21 36 0 0 chr17 22695908 22695936 -72576715 + AT_rich Low_complexity Low_complexity 1 28 0 1 758 244 349 36 18 chr17 22696393 22696504 -72576147 + MTD LTR MaLR 1 113 -306 1 758 317 188 121 36 chr17 22696479 22696562 -72576089 + RLTR25B LTR ERVK 420 509 -519 1 758 795 73 0 9 chr17 22696495 22696605 -72576046 + B1_Mus1 SINE Alu 40 148 0 1 758 228 111 0 0 chr17 22696716 22696752 -72575899 - L1Md_F LINE L1 -5883 636 601 1 758 270 219 70 0 chr17 22696806 22696897 -72575754 + MTD LTR MaLR 258 399 -20 1 758 245 316 42 10 chr17 22697878 22698078 -72574573 - L1_Mur3 LINE L1 -2228 3915 3679 1 758 626 257 71 0 chr17 22698228 22698411 -72574240 - Lx2B LINE L1 0 7000 6805 1 758 234 379 0 87 chr17 22698460 22698564 -72574087 + RMER1B Other Other 163 257 -809 1 758 777 369 67 21 chr17 22698622 22699215 -72573436 + RMER1C Other Other 445 994 -348 1 758 6678 118 4 1 chr17 22699218 22700225 -72572426 + L1_Mus3 LINE L1 5625 6638 0 1 758 569 304 57 18 chr17 22700234 22700515 -72572136 + RMER1C Other Other 1046 1337 -5 1 758 1916 312 38 32 chr17 22700898 22701705 -72570946 + Lx5 LINE L1 5927 6738 -312 1 758 5868 82 12 0 chr17 22701714 22702512 -72570139 - L1_Mus1 LINE L1 -1 6566 5759 1 758 3224 97 13 55 chr17 22702512 22702555 -72570096 + L1_Mm LINE L1 5259 5299 -584 1 758 2910 94 0 15 chr17 22702555 22702965 -72569686 + L1Md_F2 LINE L1 6167 6570 -12 1 758 3224 97 13 55 chr17 22702965 22703446 -72569205 + L1_Mm LINE L1 5300 5761 -122 1 758 486 373 7 53 chr17 22703456 22703756 -72568895 + Lx5 LINE L1 6749 7034 -16 1 758 261 0 0 0 chr17 22703758 22703787 -72568864 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 1 758 21 0 0 0 chr17 22704096 22704117 -72568534 + AT_rich Low_complexity Low_complexity 1 21 0 2 758 456 51 0 0 chr17 22704273 22704332 -72568319 + (TA)n Simple_repeat Simple_repeat 1 59 0 2 758 277 318 83 29 chr17 22705087 22705291 -72567360 + B3 SINE B2 2 216 0 2 758 21 0 0 0 chr17 22705403 22705424 -72567227 + AT_rich Low_complexity Low_complexity 1 21 0 2 758 1870 38 12 36 chr17 22706085 22706332 -72566319 - L1Md_F3 LINE L1 -1 6583 6343 2 758 216 339 11 17 chr17 22706481 22706658 -72565993 + (CATATA)n Simple_repeat Simple_repeat 1 176 0 2 758 465 34 0 0 chr17 22706710 22706769 -72565882 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 758 223 197 26 26 chr17 22707056 22707134 -72565517 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 2 758 555 208 0 0 chr17 22709530 22709650 -72563001 + (TATATG)n Simple_repeat Simple_repeat 6 125 0 2 758 28 48 0 0 chr17 22711756 22711798 -72560853 + AT_rich Low_complexity Low_complexity 1 42 0 2 758 2063 282 76 62 chr17 22712013 22712885 -72559766 - L1_Mur3 LINE L1 -2059 3821 2943 2 758 2765 83 5 17 chr17 22712885 22713289 -72559362 - L1Md_F2 LINE L1 -13 6569 6171 2 758 2063 282 76 62 chr17 22713289 22714134 -72558517 - L1_Mur3 LINE L1 -2938 2942 2080 2 758 1265 315 89 24 chr17 22714642 22715234 -72557417 - L1_Mur3 LINE L1 -6914 814 184 2 758 1377 158 58 7 chr17 22715213 22715487 -72557164 + L1_Mur1 LINE L1 4827 5114 -772 2 758 386 326 14 7 chr17 22715573 22715715 -72556936 + B1_Mur3 SINE Alu 3 145 -4 2 758 988 311 48 20 chr17 22716608 22716966 -72555685 + RMER1B Other Other 2 369 -697 2 758 495 350 1 1 chr17 22717008 22717176 -72555475 + RMER1A Other Other 44 192 -838 2 758 1526 249 66 9 chr17 22717219 22717672 -72554979 - Lx6 LINE L1 -572 6888 6410 2 758 2671 106 34 10 chr17 22717680 22718091 -72554560 - BGLII LTR ERVK 0 421 1 2 758 1094 311 6 20 chr17 22718091 22718435 -72554216 - Lx6 LINE L1 -946 6514 6176 2 758 1182 285 97 27 chr17 22718437 22719105 -72553546 - Lx6 LINE L1 -1600 6096 5357 2 758 1112 103 11 39 chr17 22719105 22719286 -72553365 + B2_Mm2 SINE B2 6 181 -14 2 758 1002 108 0 7 chr17 22719288 22719437 -72553214 + B1_Mus1 SINE Alu 1 148 0 2 758 2244 275 26 24 chr17 22719660 22720479 -72552172 - Lx6 LINE L1 -519 5361 4542 2 758 1450 323 83 15 chr17 22720452 22721426 -72551225 - Lx6 LINE L1 -6385 1343 304 2 758 273 89 0 0 chr17 22721426 22721471 -72551180 + (CAAA)n Simple_repeat Simple_repeat 4 48 0 2 758 774 75 0 0 chr17 22721643 22721749 -72550902 + (TA)n Simple_repeat Simple_repeat 2 107 0 2 758 369 0 0 0 chr17 22721749 22721789 -72550862 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 758 21 36 0 0 chr17 22721842 22721870 -72550781 + AT_rich Low_complexity Low_complexity 1 28 0 2 758 2314 84 3 30 chr17 22722102 22722433 -72550218 + RLTRETN_Mm LTR ERVK 1 322 0 2 758 23623 59 6 14 chr17 22722434 22725900 -72546751 + MMETn-int LTR ERVK 2 4693 -2713 2 758 9950 116 16 31 chr17 22725988 22727698 -72544953 + MMETn-int LTR ERVK 3219 5707 -2510 2 758 2300 84 0 50 chr17 22727698 22728037 -72544614 + RLTRETN_Mm LTR ERVK 1 322 0 2 758 306 182 0 0 chr17 22728668 22728734 -72543917 + CT-rich Low_complexity Low_complexity 2 67 0 2 758 246 338 0 0 chr17 22729001 22729075 -72543576 - B3 SINE B2 -118 98 25 2 758 214 118 52 31 chr17 22729204 22729300 -72543351 + (TA)n Simple_repeat Simple_repeat 1 98 0 2 758 2024 211 52 10 chr17 22729630 22729953 -72542698 + L1VL2 LINE L1 443 776 -5559 2 758 2230 129 14 3 chr17 22729953 22730317 -72542334 + Lx LINE L1 6284 6651 -3 2 758 2024 183 13 2 chr17 22730317 22730831 -72541820 + L1VL2 LINE L1 777 1304 -2311 2 758 7884 191 28 108 chr17 22730818 22730858 -72541793 + L1_Mur2 LINE L1 2664 2708 -3169 2 758 297 0 0 0 chr17 22730858 22730891 -72541760 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 758 7884 191 28 108 chr17 22730891 22731684 -72540967 + L1_Mur2 LINE L1 2709 3461 -2416 2 758 1108 126 28 11 chr17 22731684 22731861 -72540790 + B2_Mm2 SINE B2 1 180 -15 2 758 7884 191 28 108 chr17 22731861 22731931 -72540720 + L1_Mur2 LINE L1 3462 3520 -2357 2 758 372 100 319 44 chr17 22731931 22732044 -72540607 + B2_Mm2 SINE B2 47 190 -5 2 758 7884 191 28 108 chr17 22732044 22732395 -72540256 + L1_Mur2 LINE L1 3521 3817 -2060 2 758 3777 78 0 6 chr17 22732395 22732897 -72539754 + L1Md_F2 LINE L1 6073 6571 -11 2 758 7884 191 28 108 chr17 22732897 22734028 -72538623 + L1_Mur2 LINE L1 3818 4964 -913 2 758 2069 94 25 21 chr17 22734028 22734354 -72538297 + L1Md_F2 LINE L1 6255 6581 -1 2 758 1724 292 45 93 chr17 22734381 22735351 -72537300 + L1_Mur3 LINE L1 2087 2973 -2907 2 758 564 258 8 0 chr17 22735351 22735479 -72537172 + B1_Mur4 SINE Alu 5 133 -17 2 758 1724 292 45 93 chr17 22735479 22736331 -72536320 + L1_Mur3 LINE L1 2974 3821 -2059 2 758 513 115 0 0 chr17 22738699 22738777 -72533874 + (TA)n Simple_repeat Simple_repeat 2 79 0 2 758 358 185 0 15 chr17 22741165 22741297 -72531354 + (TA)n Simple_repeat Simple_repeat 1 130 0 2 758 293 309 12 18 chr17 22741592 22741809 -72530842 + (TG)n Simple_repeat Simple_repeat 1 215 0 2 758 366 319 52 33 chr17 22742781 22742992 -72529659 - B3 SINE B2 0 216 2 2 758 21 0 0 0 chr17 22743960 22743981 -72528670 + AT_rich Low_complexity Low_complexity 1 21 0 2 758 2835 116 19 50 chr17 22744614 22745084 -72527567 - L1_Mm LINE L1 -122 5761 5294 2 758 3055 69 17 10 chr17 22745084 22745493 -72527158 - L1Md_F2 LINE L1 -2 6580 6169 2 758 2835 116 19 50 chr17 22745493 22745541 -72527110 - L1_Mm LINE L1 -590 5293 5259 2 758 6124 72 9 0 chr17 22745541 22746341 -72526310 + L1_Mus1 LINE L1 5759 6565 -2 2 758 1573 321 41 31 chr17 22746351 22747136 -72525515 - Lx5 LINE L1 -312 6738 5946 2 758 383 304 70 11 chr17 22747558 22747744 -72524907 - RMER1C Other Other -5 1337 1141 2 758 5702 126 13 0 chr17 22747782 22748717 -72523934 - L1_Mus3 LINE L1 -63 6575 5625 2 758 650 376 60 17 chr17 22748725 22749306 -72523345 - RMER1C Other Other -347 995 426 2 758 520 257 74 0 chr17 22749530 22749705 -72522946 + Lx2B LINE L1 6810 6997 -3 2 758 217 132 0 0 chr17 22750815 22750853 -72521798 + (T)n Simple_repeat Simple_repeat 1 38 0 2 758 253 83 0 0 chr17 22751214 22751250 -72521401 + L1Md_F LINE L1 601 636 -5883 2 758 765 73 0 35 chr17 22751374 22751487 -72521164 - B1_Mus1 SINE Alu 0 148 40 2 758 315 188 121 36 chr17 22751420 22751503 -72521148 - RLTR25B LTR ERVK -519 509 420 2 758 242 339 36 18 chr17 22751478 22751589 -72521062 - MTD LTR MaLR -306 113 1 2 758 21 36 0 0 chr17 22752046 22752074 -72520577 + AT_rich Low_complexity Low_complexity 1 28 0 2 758 21 0 0 0 chr17 22752706 22752727 -72519924 + AT_rich Low_complexity Low_complexity 1 21 0 2 758 716 166 61 12 chr17 22752727 22752892 -72519759 - Lx3_Mus LINE L1 -8 7001 6829 2 758 4547 102 14 3 chr17 22752893 22753589 -72519062 + Lx3_Mus LINE L1 6125 6828 -181 2 758 21 89 0 0 chr17 22754288 22754344 -72518307 + AT_rich Low_complexity Low_complexity 1 56 0 2 758 2584 171 8 11 chr17 22754608 22755080 -72517571 - RLTR31B_Mm LTR ERVK -86 471 1 2 758 218 351 18 96 chr17 22756417 22756584 -72516067 + B3A SINE B2 34 187 -11 2 758 357 260 0 0 chr17 22756872 22756949 -72515702 - RLTR21 LTR ERVK -4 1568 1492 2 758 5987 64 0 6 chr17 22756949 22757750 -72514901 - L1Md_F2 LINE L1 -25 6557 5762 2 758 8511 164 14 11 chr17 22757879 22759912 -72512739 - MuRRS-int LTR ERV1 -3110 4342 2151 2 758 934 104 0 0 chr17 22759914 22760058 -72512593 - MuRRS-int LTR ERV1 -3439 1251 1108 2 758 3130 110 29 30 chr17 22760180 22761012 -72511639 - MuRRS-int LTR ERV1 -3581 1109 1 2 758 4706 60 3 2 chr17 22761012 22761598 -72511053 - LTRIS_Mus LTR ERV1 0 587 1 2 758 323 306 82 70 chr17 22763423 22763697 -72508954 + L1M4 LINE L1 5233 5506 -667 2 758 3856 88 2 7 chr17 22763998 22764557 -72508094 - L1_Mus2 LINE L1 0 6654 6017 2 758 595 74 0 59 chr17 22764558 22764659 -72507992 - L1_Mus2 LINE L1 -455 6111 6017 2 758 7526 100 2 19 chr17 22764656 22766090 -72506561 - L1_Mus2 LINE L1 -450 6116 4712 2 758 371 282 12 0 chr17 22766162 22766247 -72506404 - URR1B DNA MER1_type -139 86 1 2 758 429 54 0 0 chr17 22766334 22766390 -72506261 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 758 429 20 0 0 chr17 22766394 22766444 -72506207 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 758 496 311 68 36 chr17 22766486 22766706 -72505945 - RMER15 LTR ERVL -106 469 243 2 758 307 328 34 0 chr17 22766736 22766855 -72505796 - RMER15 LTR ERVL -452 123 1 2 758 21 36 0 0 chr17 22766911 22766939 -72505712 + AT_rich Low_complexity Low_complexity 1 28 0 2 758 1245 248 43 78 chr17 22767125 22767571 -72505080 + RLTR20B3 LTR ERVK 1 430 -147 2 758 180 213 84 96 chr17 22767979 22768062 -72504589 + L3 LINE CR1 4400 4481 -8 2 758 2259 137 64 55 chr17 22768668 22769139 -72503512 - IAPLTR2_Mm LTR ERVK 0 475 1 2 758 20170 13 3 0 chr17 22769139 22771491 -72501160 - IAPEz-int LTR ERVK 0 6481 4123 2 758 873 81 24 0 chr17 22771493 22771616 -72501035 - IAPEz-int LTR ERVK -2770 4910 4785 2 758 1716 123 4 4 chr17 22771613 22771875 -72500776 - IAPEz-int LTR ERVK -5183 2497 2236 2 758 424 38 0 0 chr17 22771874 22771927 -72500724 - IAPEz-int LTR ERVK -5070 1411 1359 2 758 4564 64 4 33 chr17 22771927 22772614 -72500037 - IAPEz-int LTR ERVK -5819 662 3 2 758 2259 137 64 55 chr17 22772616 22773087 -72499564 - IAPLTR2_Mm LTR ERVK 0 475 1 2 758 494 298 0 0 chr17 22773111 22773232 -72499419 + RodERV21-int LTR ERV1 4286 4406 -585 2 758 1073 221 77 79 chr17 22773283 22773922 -72498729 + RMER19B LTR ERVK 1 864 -38 2 758 1037 128 0 0 chr17 22773938 22774086 -72498565 - B1_Mus1 SINE Alu 0 148 1 2 758 16304 112 5 5 chr17 22774255 22777491 -72495160 - L1Md_F2 LINE L1 0 6582 3346 2 758 31179 112 24 14 chr17 22777489 22783201 -72489450 - L1Md_F2 LINE L1 -537 6045 268 2 758 655 125 94 62 chr17 22783210 22783338 -72489313 + MURVY-LTR LTR ERV1 388 519 0 2 758 259 257 0 0 chr17 22783375 22783445 -72489206 + MMSAT4 Satellite Satellite 22 91 -77 2 758 6670 101 28 21 chr17 22783743 22784766 -72487885 - Lx3_Mus LINE L1 -8 7001 5972 2 758 994 339 106 26 chr17 22784816 22785346 -72487305 + RMER15 LTR ERVL 1 572 -3 2 758 33748 44 1 3 chr17 22785417 22790656 -72481995 + L1Md_T LINE L1 269 5589 -297 2 758 8460 31 0 1 chr17 22790656 22791653 -72480998 + L1Md_T LINE L1 5590 6585 0 2 758 23 0 0 0 chr17 22791653 22791676 -72480975 + AT_rich Low_complexity Low_complexity 1 23 0 2 758 324 169 54 16 chr17 22792090 22792182 -72480469 + Lx7 LINE L1 7617 7696 0 2 758 727 126 9 0 chr17 22792544 22792655 -72479996 - RMER19C LTR ERVK -499 112 1 2 758 443 274 76 76 chr17 22792836 22793085 -72479566 - ORR1D1 LTR MaLR -5 369 121 2 758 307 175 0 0 chr17 22793095 22793152 -72479499 - ORR1D1-int LTR MaLR -60 1310 1254 2 758 1108 62 0 7 chr17 22793319 22793464 -72479187 + B1_Mus1 SINE Alu 5 148 0 2 758 258 106 0 0 chr17 22793464 22793511 -72479140 + (A)n Simple_repeat Simple_repeat 1 47 0 2 758 309 333 50 10 chr17 22794166 22794266 -72478385 + B1F1 SINE Alu 26 129 -20 2 758 360 319 40 40 chr17 22794542 22794692 -72477959 + ID_B1 SINE B4 72 221 -3 2 758 514 242 52 29 chr17 22794560 22794696 -72477955 + B1_Mur2 SINE Alu 9 147 -2 2 758 353 189 107 13 chr17 22794855 22794930 -72477721 - RMER10B LTR ERVL -316 82 1 2 758 205 312 0 15 chr17 22794971 22795036 -72477615 + CT-rich Low_complexity Low_complexity 2 65 0 2 758 230 183 42 0 chr17 22795698 22795769 -72476882 + L1_Mur3 LINE L1 2810 2883 -2997 2 758 2790 197 44 68 chr17 22795771 22796731 -72475920 + L1_Mur3 LINE L1 2996 3932 -1948 2 758 207 69 0 0 chr17 22796938 22796967 -72475684 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3 758 2257 148 129 7 chr17 22797546 22797988 -72474663 - L1Md_F LINE L1 -5766 753 258 3 758 304 194 0 16 chr17 22797988 22798051 -72474600 + RMER19B LTR ERVK 841 902 0 3 758 605 334 45 12 chr17 22798079 22798412 -72474239 + RodERV21-int LTR ERV1 4476 4819 -172 3 758 254 319 10 21 chr17 22798420 22798516 -72474135 + RMER4B LTR ERVK 346 440 -145 3 758 443 227 0 20 chr17 22799062 22799161 -72473490 + RLTR9F LTR ERVK 319 415 0 3 758 313 269 9 4 chr17 22799496 22799612 -72473039 + L1VL1 LINE L1 220 355 -6067 3 758 314 299 32 19 chr17 22799695 22799852 -72472799 + L1_Mus3 LINE L1 675 833 -5783 3 758 611 202 16 0 chr17 22799831 22799960 -72472691 + L1_Mus3 LINE L1 725 855 -5761 3 758 1122 73 17 17 chr17 22799960 22800141 -72472510 + L1Md_F2 LINE L1 6402 6582 0 3 758 34 72 0 0 chr17 22800141 22800210 -72472441 + AT_rich Low_complexity Low_complexity 1 69 0 3 758 29393 105 4 83 chr17 22800210 22802307 -72470344 + L1_Mus3 LINE L1 860 2894 -2989 3 758 1067 38 0 0 chr17 22802307 22802439 -72470212 + B1_Mm SINE Alu 14 145 -2 3 758 618 14 0 0 chr17 22802439 22802510 -72470141 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 3 758 29393 86 5 74 chr17 22802510 22805197 -72467454 + L1_Mus3 LINE L1 2895 5586 -297 3 758 8033 45 4 6 chr17 22805197 22806194 -72466457 + L1Md_F2 LINE L1 5587 6581 -1 3 94 29393 68 30 14 chr17 22806194 22807435 -72465216 + L1_Mus3 LINE L1 5587 6638 0 3 759 189 346 0 0 chr17 22807478 22807530 -72465121 - L2c LINE L2 -63 3324 3273 3 759 1016 194 23 36 chr17 22807592 22807811 -72464840 + B3 SINE B2 1 216 0 3 759 6688 104 19 7 chr17 22807892 22808923 -72463728 + L1_Mus4 LINE L1 5587 6630 -6 3 759 2067 228 23 11 chr17 22808935 22809508 -72463143 + L1_Mur3 LINE L1 3805 4384 -1496 3 759 1946 225 50 18 chr17 22809522 22810024 -72462627 + RLTR11A2 LTR ERVK 1 518 -9 3 759 744 183 59 0 chr17 22810039 22810208 -72462443 + L1_Mur3 LINE L1 4398 4576 -1304 3 759 204 40 0 0 chr17 22810978 22811003 -72461648 + (G)n Simple_repeat Simple_repeat 1 25 0 3 759 236 53 26 0 chr17 22811145 22811183 -72461468 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 759 612 0 0 0 chr17 22811933 22812001 -72460650 + (TTTTA)n Simple_repeat Simple_repeat 2 69 0 3 759 860 96 71 8 chr17 22812001 22812127 -72460524 - B1_Mus2 SINE Alu -12 135 2 3 759 252 77 0 0 chr17 22812512 22812551 -72460100 + (TTGG)n Simple_repeat Simple_repeat 1 39 0 3 759 182 132 0 50 chr17 22814576 22814616 -72458035 + GA-rich Low_complexity Low_complexity 5 42 0 3 759 1597 196 14 101 chr17 22814662 22815098 -72457553 + RMER10B LTR ERVL 1 398 0 3 759 572 347 67 36 chr17 22815990 22816349 -72456302 - Lx8 LINE L1 -555 6918 6549 3 759 261 120 329 13 chr17 22816345 22816421 -72456230 + L1_Mur2 LINE L1 5056 5155 -722 3 759 893 172 0 0 chr17 22816428 22816597 -72456054 + MYSERV6-int LTR ERVK 3305 3473 -5486 3 759 485 367 45 27 chr17 22817146 22817770 -72454881 - MERVK26-int LTR ERVK -4754 2165 1531 3 759 207 0 0 0 chr17 22819116 22819139 -72453512 + (A)n Simple_repeat Simple_repeat 1 23 0 3 759 300 53 0 0 chr17 22820179 22820217 -72452434 + (TC)n Simple_repeat Simple_repeat 1 38 0 3 759 249 33 0 0 chr17 22820217 22820247 -72452404 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 759 226 335 95 11 chr17 22820387 22820650 -72452001 - Lx8 LINE L1 -589 6884 6600 3 759 354 338 70 20 chr17 22821415 22821744 -72450907 - L1MD LINE L1 -1988 4155 3810 3 759 576 79 0 0 chr17 22821864 22821940 -72450711 + B1_Mus1 SINE Alu 3 78 -70 3 759 372 94 0 0 chr17 22821940 22821993 -72450658 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 759 261 135 0 0 chr17 22821993 22822045 -72450606 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 759 320 316 108 0 chr17 22822161 22822319 -72450332 - Lx8 LINE L1 -805 6668 6494 3 759 1223 35 0 0 chr17 22825146 22825291 -72447360 + B1_Mus2 SINE Alu 2 146 -1 3 759 180 0 0 0 chr17 22825333 22825353 -72447298 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 3 759 210 347 0 14 chr17 22825403 22825476 -72447175 + B1_Mus1 SINE Alu 30 101 -47 3 759 233 57 0 28 chr17 22825818 22825854 -72446797 + (TTTC)n Simple_repeat Simple_repeat 3 37 0 3 759 971 161 6 3 chr17 22826487 22827666 -72444985 + MMSAT4 Satellite Satellite 1 1183 -9 3 759 827 182 71 0 chr17 22827757 22827955 -72444696 - RLTR19-int LTR ERVK -2947 3190 2979 3 759 885 153 165 0 chr17 22827957 22828133 -72444518 - RMER19A LTR ERVK -532 205 1 3 759 2179 204 88 76 chr17 22828148 22828528 -72444123 - RLTR19-int LTR ERVK -3404 2733 2334 3 759 764 43 8 8 chr17 22828528 22828646 -72444005 + L1_Mus4 LINE L1 6514 6631 -5 3 759 2179 204 88 76 chr17 22828646 22829067 -72443584 - RLTR19-int LTR ERVK -3804 2333 1922 3 759 2906 57 46 0 chr17 22829226 22829594 -72443057 + IAPEY_LTR LTR ERVK 1 385 0 3 759 482 322 37 22 chr17 22829634 22829904 -72442747 - MuLV-int LTR ERV1 -216 7390 7117 3 759 302 140 40 0 chr17 22830431 22830481 -72442170 - RLTR14-int LTR ERV1 -753 4564 4513 3 759 497 323 21 5 chr17 22831025 22831215 -72441436 - RLTR6-int LTR ERV1 -2377 5401 5209 3 759 240 167 0 0 chr17 22831220 22831268 -72441383 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 759 197 196 20 0 chr17 22831267 22831318 -72441333 + (CATATA)n Simple_repeat Simple_repeat 3 54 0 3 759 491 262 36 41 chr17 22831382 22831601 -72441050 - RLTR6-int LTR ERV1 -2575 4981 4764 3 759 480 337 34 31 chr17 22831973 22832437 -72440214 - RLTR6-int LTR ERV1 -3075 4481 4017 3 759 585 235 39 50 chr17 22832639 22832818 -72439833 - MuRRS4-int LTR ERV1 -2596 2467 2291 3 759 243 0 0 0 chr17 22833621 22833648 -72439003 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 759 738 341 45 16 chr17 22834269 22834582 -72438069 - RLTR23 LTR ERV1 0 430 109 3 759 463 195 0 174 chr17 22834613 22834768 -72437883 - RLTR23 LTR ERV1 -295 135 8 3 759 656 301 130 29 chr17 22834801 22835215 -72437436 - Lx8 LINE L1 -554 6919 6464 3 759 315 295 15 44 chr17 22835666 22835801 -72436850 - L1MC LINE L1 -2421 3725 3595 3 759 275 342 9 0 chr17 22836118 22836232 -72436419 - Lx8 LINE L1 -797 6676 6562 3 759 3034 17 0 3 chr17 22836758 22837111 -72435540 - L1Md_A LINE L1 -1 6581 6230 3 759 419 308 120 6 chr17 22837474 22837657 -72434994 + B3 SINE B2 2 205 -11 3 759 5702 154 26 25 chr17 22837698 22838834 -72433817 + Lx3C LINE L1 5669 6806 -170 3 759 587 184 0 99 chr17 22839014 22839165 -72433486 - Lx3C LINE L1 -425 6551 6416 3 759 472 40 0 26 chr17 22839537 22839614 -72433037 - L1VL4 LINE L1 -5471 831 757 3 759 315 0 0 0 chr17 22839614 22839649 -72433002 + (CAT)n Simple_repeat Simple_repeat 2 36 0 3 759 616 234 98 0 chr17 22839722 22839936 -72432715 + Lx9 LINE L1 7372 7606 -38 3 759 36851 8 0 1 chr17 22839942 22845931 -72426720 + L1Md_A LINE L1 1 5586 -297 3 759 9045 3 0 0 chr17 22845931 22846927 -72425724 + L1Md_A LINE L1 5587 6582 0 3 759 477 352 55 41 chr17 22846994 22847213 -72425438 + MLT1A0 LTR MaLR 39 260 -105 3 759 773 277 27 3 chr17 22847339 22847636 -72425015 + L1M2 LINE L1 3818 4121 -2022 3 759 3118 215 55 16 chr17 22847945 22848660 -72423991 - MTC-int LTR MaLR -370 888 1 3 759 571 231 275 0 chr17 22848660 22848820 -72423831 - MTC LTR MaLR 0 421 218 3 759 3711 149 76 21 chr17 22848821 22849528 -72423123 - L1VL2 LINE L1 -5524 811 66 3 759 630 217 29 11 chr17 22849641 22850326 -72422325 - MMSAT4 Satellite Satellite -78 697 1 3 759 1743 160 0 60 chr17 22850326 22850673 -72421978 - ORR1A3 LTR MaLR 0 326 1 3 759 1091 154 1 2 chr17 22850673 22852358 -72420293 - MMSAT4 Satellite Satellite -26 1683 1 3 759 488 354 39 0 chr17 22857287 22857465 -72415186 + B3 SINE B2 18 202 -14 3 759 213 94 0 0 chr17 22857467 22857499 -72415152 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3 759 460 327 19 0 chr17 22857876 22858081 -72414570 + B3 SINE B2 3 211 -5 3 759 379 230 21 103 chr17 22861311 22861408 -72411243 + URR1B DNA MER1_type 1 89 -136 3 759 248 329 12 0 chr17 22861858 22861943 -72410708 + MLT1E2 LTR MaLR 81 166 -461 3 759 385 354 15 13 chr17 22862098 22862259 -72410392 - MT2A LTR ERVL -55 546 316 3 759 375 273 0 10 chr17 22862352 22862452 -72410199 - MT2A LTR ERVL -434 99 1 3 759 4564 130 40 34 chr17 22862776 22863692 -72408959 - RMER17A2 LTR ERVK -106 800 1 3 759 329 241 78 94 chr17 22864172 22864300 -72408351 + RodERV21-int LTR ERV1 2372 2497 -2494 3 759 257 0 30 0 chr17 22864308 22864341 -72408310 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 3 759 893 59 0 8 chr17 22864342 22864462 -72408189 - B1_Mus2 SINE Alu -2 145 27 3 759 303 237 13 13 chr17 22864464 22864541 -72408110 + RodERV21-int LTR ERV1 2516 2592 -2399 3 759 507 145 0 0 chr17 22864918 22864994 -72407657 + RLTR23 LTR ERV1 349 424 -6 3 759 3176 163 86 18 chr17 22865372 22866044 -72406607 - RMER17B LTR ERVK 0 958 286 3 759 1220 245 54 21 chr17 22866016 22866441 -72406210 - RMER17B LTR ERVK -519 439 1 3 759 1285 247 25 16 chr17 22866876 22867197 -72405454 + Lx5 LINE L1 6374 6697 -353 3 759 938 176 46 17 chr17 22868355 22868592 -72404059 + L1_Mur3 LINE L1 4692 4935 -945 3 759 2969 224 49 2 chr17 22869004 22869846 -72402805 + L1_Mur3 LINE L1 4930 5810 -70 3 759 4637 120 69 6 chr17 22869837 22870921 -72401730 + Lx2B LINE L1 5240 6384 -616 3 759 620 147 12 0 chr17 22870927 22871090 -72401561 + (TAGA)n Simple_repeat Simple_repeat 4 168 0 3 759 3286 140 64 28 chr17 22871092 22871673 -72400978 + Lx2B LINE L1 6396 6997 -3 3 759 190 320 20 49 chr17 22872954 22873056 -72399595 + MIRc SINE MIR 45 143 -125 3 759 654 49 0 0 chr17 22874033 22874115 -72398536 + (TA)n Simple_repeat Simple_repeat 1 82 0 3 759 501 237 38 15 chr17 22874474 22874607 -72398044 + B1_Mur4 SINE Alu 12 147 -3 3 759 227 235 22 45 chr17 22875028 22875117 -72397534 + L1M3 LINE L1 4583 4669 -1471 3 759 878 249 17 13 chr17 22877818 22878022 -72394629 - L1_Mur3 LINE L1 -1510 4636 4393 3 759 1572 238 75 10 chr17 22878022 22878515 -72394136 - RLTR11A2 LTR ERVK 0 527 3 3 759 878 246 12 12 chr17 22878515 22878576 -72394075 - L1_Mur3 LINE L1 -1488 4392 4330 3 759 412 312 39 14 chr17 22878863 22879071 -72393580 - B3 SINE B2 -1 215 3 3 759 549 350 44 0 chr17 22879469 22879675 -72392976 - B3 SINE B2 -1 215 1 3 759 4046 118 46 14 chr17 22882493 22883567 -72389084 + RLTR13D1 LTR ERVK 1 806 0 3 759 243 286 0 0 chr17 22884158 22884256 -72388395 + MurSatRep1 Unknown Unknown 631 728 -1409 3 759 220 286 0 0 chr17 22884685 22884734 -72387917 + B1F SINE Alu 88 136 -13 3 759 3220 107 2 8 chr17 22885216 22885697 -72386954 + L1_Mus4 LINE L1 6159 6636 0 4 759 323 335 38 19 chr17 22885846 22886056 -72386595 + B3 SINE B2 1 214 -2 4 759 1643 199 90 12 chr17 22886551 22886897 -72385754 + ORR1C1 LTR MaLR 4 376 -2 4 759 207 0 0 0 chr17 22887409 22887432 -72385219 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 759 393 376 52 26 chr17 22887679 22888064 -72384587 + L1M2 LINE L1 3910 4304 -1839 4 759 3110 210 33 5 chr17 22888671 22889313 -72383338 + Lx4B LINE L1 6399 7058 0 4 759 667 232 7 0 chr17 22890284 22890426 -72382225 + B1_Mur3 SINE Alu 1 143 -6 4 759 1958 113 12 51 chr17 22890494 22890829 -72381822 + RLTRETN_Mm LTR ERVK 1 322 0 4 759 279 309 42 12 chr17 22892115 22892282 -72380369 + L1_Rod LINE L1 736 907 -6265 4 759 6034 65 14 2 chr17 22892300 22893116 -72379535 + RLTR22_Mus LTR ERVK 1 825 -983 4 759 458 289 40 75 chr17 22893356 22893584 -72379067 + RMER12 LTR ERVK 1101 1320 -2 4 759 1391 197 35 44 chr17 22893774 22894093 -72378558 + RLTR16 LTR ERVK 1 316 -189 4 759 3801 47 20 6 chr17 22894093 22894582 -72378069 - LTRIS2 LTR ERV1 0 564 69 4 759 533 293 23 11 chr17 22894596 22894772 -72377879 + RLTR16 LTR ERVK 313 490 -15 4 759 411 263 35 0 chr17 22894840 22894954 -72377697 + B1_Mur2 SINE Alu 32 149 0 4 759 373 342 71 22 chr17 22895064 22895288 -72377363 + ORR1D2 LTR MaLR 6 240 -130 4 759 8333 4 0 0 chr17 22895292 22896215 -72376436 - L1Md_T LINE L1 0 6582 5660 4 759 7054 15 0 0 chr17 22896215 22897022 -72375629 + L1Md_T LINE L1 4849 5655 -228 4 759 393 260 57 8 chr17 22897022 22897146 -72375505 + ORR1D2 LTR MaLR 238 367 -3 4 759 1299 200 13 47 chr17 22897262 22897561 -72375090 - RMER6B LTR ERVK -2 459 171 4 759 701 253 0 0 chr17 22898278 22898424 -72374227 - B1_Mur4 SINE Alu -2 148 3 4 759 330 345 34 28 chr17 22898424 22898553 -72374098 + B3 SINE B2 85 214 -2 4 759 12779 135 29 5 chr17 22898676 22900839 -72371812 - L1_Mur2 LINE L1 -157 5720 3507 4 759 14542 13 2 15 chr17 22900833 22903206 -72369445 - L1Md_A LINE L1 -2977 2906 570 4 759 1426 264 77 39 chr17 22904118 22904642 -72368009 - RMER19C LTR ERVK -243 659 138 4 759 1075 188 69 30 chr17 22904677 22905012 -72367639 - MurERV4_19-int LTR ERVK 0 5780 5433 4 759 406 240 56 28 chr17 22905110 22905217 -72367434 - RSINE1 SINE B4 -54 111 2 4 759 536 176 48 56 chr17 22905301 22905427 -72367224 - B1_Mur1 SINE Alu -7 142 18 4 759 353 265 24 101 chr17 22905427 22905464 -72367187 - ID_B1 SINE B4 -2 217 68 4 759 358 133 0 16 chr17 22905598 22905659 -72366992 - L1_Mur2 LINE L1 -3696 2181 2122 4 759 4152 161 77 3 chr17 22905655 22906425 -72366226 - Lx4A LINE L1 -247 6811 5985 4 759 1581 214 52 9 chr17 22906413 22906758 -72365893 + Lx4A LINE L1 6660 7019 -39 4 759 22 35 0 0 chr17 22906771 22906800 -72365851 + AT_rich Low_complexity Low_complexity 1 29 0 4 759 201 39 0 0 chr17 22906806 22906832 -72365819 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 4 759 240 111 0 0 chr17 22907978 22908014 -72364637 + (T)n Simple_repeat Simple_repeat 1 36 0 4 759 905 67 0 0 chr17 22908014 22908134 -72364517 - B1_Mus2 SINE Alu 0 147 28 4 759 2007 32 8 8 chr17 22909226 22909477 -72363174 - L1Md_F3 LINE L1 -2 6582 6332 4 759 550 299 67 63 chr17 22909562 22909801 -72362850 - RMER15 LTR ERVL -96 479 240 4 759 1877 203 29 81 chr17 22909808 22910391 -72362260 - RLTR31_Mur LTR ERVK 0 553 1 4 759 5750 202 42 61 chr17 22910397 22911881 -72360770 - RMER3D-int LTR ERVK -5 2837 1382 4 759 1088 177 345 25 chr17 22912033 22912311 -72360340 - RMER3D-int LTR ERVK -1460 1382 1016 4 759 871 247 39 83 chr17 22912574 22912984 -72359667 - RMER3D-int LTR ERVK -2129 713 1 4 759 2396 206 7 55 chr17 22912984 22913565 -72359086 - RLTR31_Mur LTR ERVK 0 553 1 4 759 1113 150 3 0 chr17 22914019 22915206 -72357445 - MMSAT4 Satellite Satellite -11 1190 1 4 759 254 339 0 0 chr17 22916367 22916482 -72356169 - MurSatRep1 Unknown Unknown -1392 745 631 4 759 276 266 43 34 chr17 22916723 22916840 -72355811 - MMSAT4 Satellite Satellite -14 154 37 4 759 381 366 18 12 chr17 22916843 22917006 -72355645 + B3 SINE B2 53 216 0 4 759 418 271 12 0 chr17 22919620 22919705 -72352946 - URR1B DNA MER1_type -139 86 1 4 759 358 315 22 37 chr17 22920019 22920154 -72352497 + RMER12 LTR ERVK 718 850 -472 4 759 240 298 12 0 chr17 22920154 22920238 -72352413 + (TA)n Simple_repeat Simple_repeat 2 86 0 4 759 391 325 87 30 chr17 22920842 22921140 -72351511 + L1_Mur3 LINE L1 3761 4075 -1805 4 759 500 370 25 8 chr17 22921445 22921690 -72350961 + Lx8 LINE L1 6506 6754 -719 4 759 1332 158 26 0 chr17 22921703 22921931 -72350720 - ORR1A4 LTR MaLR 0 329 96 4 759 407 176 0 13 chr17 22921934 22922009 -72350642 - ORR1B2 LTR MaLR -24 343 270 4 759 1526 244 14 8 chr17 22922864 22923227 -72349424 - ORR1B2 LTR MaLR 0 367 3 4 759 2912 208 37 12 chr17 22923280 22924045 -72348606 + L1_Mur3 LINE L1 2881 3664 -2216 4 759 24391 156 28 8 chr17 22924055 22930197 -72342454 + Lx LINE L1 356 6634 -20 4 759 942 205 25 0 chr17 22930200 22930400 -72342251 + RCHARR1 DNA MER1_type 655 859 -115 4 759 472 262 11 4 chr17 22930498 22930706 -72341945 + MMSAT4 Satellite Satellite 1 209 -4 4 759 1960 118 39 60 chr17 22930977 22931311 -72341340 - ORR1A2 LTR MaLR 0 327 1 4 759 399 306 20 40 chr17 22931657 22931823 -72340828 + RMER20B LTR ERVK 1 161 -355 4 759 354 295 112 20 chr17 22932338 22932490 -72340161 + MERVK26-int LTR ERVK 192 357 -6562 4 759 303 367 22 22 chr17 22934549 22934730 -72337921 + MERVK26-int LTR ERVK 2599 2779 -4140 4 759 1888 151 3 23 chr17 22934729 22935074 -72337577 - MYSERV6-int LTR ERVK -5484 3475 3138 4 759 2289 143 15 25 chr17 22935069 22935470 -72337181 - MYSERV6-int LTR ERVK -7623 1336 940 4 759 555 180 63 0 chr17 22935454 22935565 -72337086 - MYSERV6-int LTR ERVK -8481 478 361 4 759 422 165 0 0 chr17 22935560 22935645 -72337006 - MYSERV6-int LTR ERVK -8528 431 347 4 759 357 273 67 70 chr17 22936145 22936472 -72336179 + RodERV21-int LTR ERV1 2749 3074 -1917 4 759 953 312 20 0 chr17 22936759 22937063 -72335588 + RodERV21-int LTR ERV1 4251 4560 -431 4 760 530 244 25 15 chr17 22938104 22938661 -72333990 + MMSAT4 Satellite Satellite 1 562 0 4 760 300 254 0 14 chr17 22938895 22938967 -72333684 + RMER12B LTR ERVK 1 71 -1333 4 760 482 230 0 10 chr17 22938936 22939037 -72333614 + RMER12B LTR ERVK 241 340 -1064 4 760 394 256 17 17 chr17 22939091 22939210 -72333441 + RMER15 LTR ERVL 1 119 -456 4 760 858 296 22 25 chr17 22939264 22939538 -72333113 + RMER15 LTR ERVL 303 575 0 4 760 2885 68 16 0 chr17 22940125 22940506 -72332145 - L1_Mus3 LINE L1 -635 6003 5617 4 760 4539 75 28 3 chr17 22940519 22941138 -72331513 + L1_Mus3 LINE L1 6005 6638 0 4 760 255 355 19 0 chr17 22941736 22941843 -72330808 + B1F SINE Alu 1 109 -40 4 760 294 311 116 40 chr17 22943624 22943822 -72328829 - B3 SINE B2 -3 213 1 4 760 301 231 12 25 chr17 22944112 22944192 -72328459 - MTC LTR MaLR -137 284 206 4 760 489 124 0 0 chr17 22944332 22944429 -72328222 + (CA)n Simple_repeat Simple_repeat 2 98 0 4 760 301 240 0 107 chr17 22945036 22945120 -72327531 + B3A SINE B2 1 75 -141 4 760 6319 196 227 25 chr17 22945709 22945804 -72326847 + L1_Mur3 LINE L1 2996 3087 -2793 4 760 306 0 0 0 chr17 22945804 22945838 -72326813 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 4 760 6319 196 227 25 chr17 22945838 22946194 -72326457 + L1_Mur3 LINE L1 3088 3476 -2404 4 760 198 0 0 0 chr17 22946194 22946216 -72326435 + (CCA)n Simple_repeat Simple_repeat 1 22 0 4 760 6319 196 227 25 chr17 22946216 22948091 -72324560 + L1_Mur3 LINE L1 3477 5793 -87 4 760 23 33 0 0 chr17 22948149 22948179 -72324472 + AT_rich Low_complexity Low_complexity 1 30 0 4 760 431 202 12 0 chr17 22948457 22948541 -72324110 + ORR1C1 LTR MaLR 207 291 -87 4 760 6088 78 12 13 chr17 22948783 22950444 -72322207 + L1VL4 LINE L1 100 1756 -1803 4 760 3449 173 64 57 chr17 22950443 22952080 -72320571 + Lx2 LINE L1 5346 6997 0 4 760 293 266 33 99 chr17 22952253 22952374 -72320277 + MT2B LTR ERVL 146 258 -343 4 760 452 254 60 23 chr17 22952276 22952409 -72320242 + B1_Mur3 SINE Alu 5 142 -7 4 760 29 28 0 0 chr17 22952953 22952989 -72319662 + AT_rich Low_complexity Low_complexity 1 36 0 4 760 204 175 0 34 chr17 22953719 22953778 -72318873 + (CAAA)n Simple_repeat Simple_repeat 3 59 0 4 760 3691 205 31 12 chr17 22955752 22955936 -72316715 - L1_Mur3 LINE L1 -1304 4576 4393 4 760 1588 218 89 24 chr17 22955936 22956429 -72316222 - RLTR11A2 LTR ERVK 0 527 3 4 760 3691 205 31 12 chr17 22956429 22957209 -72315442 - L1_Mur3 LINE L1 -1488 4392 3594 4 760 2134 122 3 0 chr17 22957226 22957538 -72315113 + ORR1A2 LTR MaLR 7 319 -8 4 760 2084 198 71 5 chr17 22957542 22958102 -72314549 - L1_Mur3 LINE L1 -2288 3592 2996 4 760 491 94 31 10 chr17 22958604 22958701 -72313950 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 4 760 441 15 45 0 chr17 22958834 22958900 -72313751 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 4 760 952 85 0 0 chr17 22958900 22959029 -72313622 - B1_Mus1 SINE Alu -10 138 10 4 760 26584 31 1 6 chr17 22959125 22963213 -72309438 - L1Md_T LINE L1 0 6582 2517 4 760 33017 52 1 8 chr17 22963194 22968619 -72304032 + L1Md_T LINE L1 110 5589 -297 4 760 8391 36 1 0 chr17 22968619 22969614 -72303037 + L1Md_T LINE L1 5590 6585 0 4 760 10439 36 0 18 chr17 22969616 22971561 -72301090 - L1Md_T LINE L1 -3351 2532 631 4 760 14691 105 9 9 chr17 22971549 22974622 -72298029 + L1_Mus2 LINE L1 3494 6566 0 4 760 640 270 0 0 chr17 22974625 22974762 -72297889 + B3 SINE B2 68 204 -12 4 760 29 0 0 0 chr17 22974832 22974861 -72297790 + AT_rich Low_complexity Low_complexity 1 29 0 4 760 1666 150 26 75 chr17 22975786 22976132 -72296519 - ORR1A4 LTR MaLR 0 329 1 4 760 7683 74 3 2 chr17 22976331 22977397 -72295254 - L1Md_F2 LINE L1 -145 5738 4672 4 760 5343 61 4 1 chr17 22977397 22978105 -72294546 + L1Md_F2 LINE L1 5759 6468 -114 4 760 303 275 47 68 chr17 22978175 22978323 -72294328 + B1_Mur1 SINE Alu 5 149 0 4 760 2378 192 255 65 chr17 22978500 22978716 -72293935 + RMER19B LTR ERVK 1 243 -659 4 760 180 0 0 0 chr17 22978716 22978736 -72293915 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 760 2378 192 255 65 chr17 22978736 22979277 -72293374 + RMER19B LTR ERVK 244 902 0 4 760 357 24 0 0 chr17 22980058 22980100 -72292551 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 760 22 0 0 0 chr17 22980884 22980906 -72291745 + AT_rich Low_complexity Low_complexity 1 22 0 4 760 303 28 0 0 chr17 22981326 22981362 -72291289 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 760 294 29 0 0 chr17 22981362 22981396 -72291255 + (GA)n Simple_repeat Simple_repeat 2 36 0 4 760 301 347 14 74 chr17 22981665 22981880 -72290771 - B3 SINE B2 -14 202 1 4 760 557 221 40 46 chr17 22982253 22982405 -72290246 - URR1A DNA MER1_type -41 185 35 4 760 545 244 73 0 chr17 22982821 22982944 -72289707 - ORR1C2 LTR MaLR -10 374 243 4 760 338 253 54 21 chr17 22982963 22983056 -72289595 - ORR1C2 LTR MaLR -278 96 1 4 760 346 245 38 1 chr17 22983056 22983151 -72289500 - ORR1C2-int LTR MaLR -53 1527 1445 4 760 2938 203 38 14 chr17 22983162 22983827 -72288824 - Lx2B LINE L1 -6 6994 6314 5 760 677 274 107 49 chr17 22983859 22984283 -72288368 + RMER12 LTR ERVK 568 1184 -138 5 760 324 48 0 0 chr17 22984962 22985004 -72287647 + (CAA)n Simple_repeat Simple_repeat 2 43 0 5 760 520 328 34 29 chr17 22985345 22985552 -72287099 - B3 SINE B2 -1 215 8 5 760 221 281 222 46 chr17 22986284 22986392 -72286259 + B1_Mur2 SINE Alu 23 149 0 5 760 460 215 19 9 chr17 22986815 22986923 -72285728 - RMER15 LTR ERVL -466 109 1 5 760 903 164 16 9 chr17 22987231 22988303 -72284348 - MMSAT4 Satellite Satellite -75 1079 1 5 760 1070 151 5 5 chr17 22988317 22988944 -72283707 - MMSAT4 Satellite Satellite -2 627 1 5 760 246 383 68 38 chr17 22990058 22990191 -72282460 - B1_Mm SINE Alu 0 147 11 5 760 1555 167 40 6 chr17 22990939 22991457 -72281194 + L1_Mur2 LINE L1 963 1504 -4373 5 760 3939 178 28 51 chr17 22991465 22991652 -72280999 + L1_Mur2 LINE L1 1916 2064 -3813 5 760 405 0 0 0 chr17 22991652 22991697 -72280954 + (CTA)n Simple_repeat Simple_repeat 3 47 0 5 760 3939 178 28 51 chr17 22991697 22992491 -72280160 + L1_Mur2 LINE L1 2065 2874 -3003 5 760 2691 161 52 63 chr17 22992499 22993153 -72279498 + L1_Mur2 LINE L1 3513 4159 -1718 5 760 2861 211 73 14 chr17 22993157 22993858 -72278793 + Lx5 LINE L1 6301 7042 -8 5 760 3352 33 5 0 chr17 22995487 22995881 -72276770 + MTA_Mm LTR MaLR 1 396 0 5 760 397 388 30 0 chr17 22996057 22996258 -72276393 + B3 SINE B2 5 211 -5 5 760 1726 65 0 4 chr17 22996538 22996770 -72275881 + L1Md_F3 LINE L1 5356 5586 -297 5 760 8503 20 5 0 chr17 22996770 22997747 -72274904 + L1Md_F3 LINE L1 5587 6568 -16 5 760 283 238 162 0 chr17 22999312 22999392 -72273259 - B1_Mur3 SINE Alu -56 93 1 5 760 431 262 34 34 chr17 22999392 22999520 -72273131 + B3 SINE B2 89 216 0 5 760 31 44 0 0 chr17 22999520 22999565 -72273086 + AT_rich Low_complexity Low_complexity 1 45 0 5 760 289 420 25 5 chr17 23000331 23000532 -72272119 + B3 SINE B2 1 205 -11 1 760 306 372 12 0 chr17 23001222 23001386 -72271265 + L1M4 LINE L1 3812 3977 -2169 2 760 781 297 115 16 chr17 23001633 23002058 -72270593 + Lx8 LINE L1 6467 6933 -540 3 760 238 186 15 119 chr17 23002852 23002919 -72269732 + RMER10A LTR ERVL 1 60 -382 4 760 301 109 0 0 chr17 23003297 23003343 -72269308 + RMER10A LTR ERVL 372 417 -25 4 760 306 0 0 0 chr17 23004520 23004554 -72268097 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 760 354 80 0 0 chr17 23004896 23004946 -72267705 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 760 345 353 61 17 chr17 23005114 23005408 -72267243 - Lx8 LINE L1 -294 7179 6873 7 760 582 15 0 0 chr17 23005446 23005513 -72267138 + (GGAA)n Simple_repeat Simple_repeat 3 69 0 8 760 2125 178 59 82 chr17 23006019 23006508 -72266143 - RLTR40 LTR ERVK -35 782 305 9 760 281 189 25 75 chr17 23006479 23006559 -72266092 - RLTR40 LTR ERVK -741 76 1 9 760 2088 231 9 0 chr17 23006690 23007144 -72265507 + Lx6 LINE L1 6173 6630 -830 1 760 363 312 26 35 chr17 23007242 23007358 -72265293 - B1F SINE Alu -29 120 6 1 760 1898 242 62 60 chr17 23007527 23008089 -72264562 + RLTR18 LTR ERVK 1 563 -53 1 760 375 251 214 39 chr17 23008106 23008288 -72264363 + RMER21B LTR ERV1 351 564 -278 1 760 230 283 16 16 chr17 23008491 23008552 -72264099 + RLTR18B LTR ERVK 452 512 0 1 760 22 0 0 0 chr17 23009140 23009162 -72263489 + AT_rich Low_complexity Low_complexity 1 22 0 1 760 680 221 7 7 chr17 23009168 23009309 -72263342 - B1_Mus1 SINE Alu -7 141 1 1 760 643 314 5 24 chr17 23009314 23009526 -72263125 - B3 SINE B2 -6 210 3 1 760 189 275 71 71 chr17 23009870 23009968 -72262683 + L3 LINE CR1 2022 2119 -2370 1 760 1343 66 71 0 chr17 23010177 23010359 -72262292 - B2_Mm2 SINE B2 0 195 1 1 760 599 291 24 24 chr17 23011037 23011248 -72261403 - B3 SINE B2 -4 212 2 2 760 338 343 0 0 chr17 23011951 23012053 -72260598 + B2_Mm2 SINE B2 1 102 -93 2 760 251 282 52 52 chr17 23012458 23012574 -72260077 - RLTR10A LTR ERVK 0 411 296 2 760 442 174 30 20 chr17 23012587 23012687 -72259964 - RLTR10A LTR ERVK -164 247 147 2 760 246 313 9 124 chr17 23012907 23013020 -72259631 + MT2B LTR ERVL 141 240 -361 2 760 559 232 7 92 chr17 23012946 23013098 -72259553 + B1_Mur2 SINE Alu 11 149 0 2 760 1835 159 34 23 chr17 23013187 23013574 -72259077 + LSU-rRNA_Hsa rRNA rRNA 2614 3004 -2031 2 760 2956 56 200 9 chr17 23013856 23014286 -72258365 + RLTR1B LTR ERV1 1 512 0 2 760 4214 139 93 34 chr17 23014320 23014687 -72257964 + LSU-rRNA_Hsa rRNA rRNA 3564 3952 -1083 2 760 234 0 0 0 chr17 23014687 23014713 -72257938 + (C)n Simple_repeat Simple_repeat 1 26 0 2 760 4214 139 93 34 chr17 23014713 23015159 -72257492 + LSU-rRNA_Hsa rRNA rRNA 3953 4425 -610 2 760 355 172 23 121 chr17 23015180 23015312 -72257339 + Lx9 LINE L1 7522 7640 -4 2 760 183 162 0 0 chr17 23016241 23016278 -72256373 + (TTG)n Simple_repeat Simple_repeat 1 37 0 2 760 697 288 63 8 chr17 23016284 23016471 -72256180 - B3 SINE B2 -7 209 11 3 760 710 241 0 0 chr17 23016484 23016621 -72256030 - B1_Mur4 SINE Alu 0 150 14 3 760 1473 100 0 9 chr17 23016978 23017190 -72255461 + ORR1A3 LTR MaLR 113 322 -4 3 760 3314 153 27 13 chr17 23017193 23017790 -72254861 + ORR1A3-int LTR MaLR 1 605 -1187 3 760 575 234 8 53 chr17 23017711 23017842 -72254809 + MT2B LTR ERVL 130 254 -347 3 760 2818 189 72 103 chr17 23018154 23018667 -72253984 + RLTR40 LTR ERVK 39 568 -249 3 760 408 20 0 0 chr17 23018667 23018716 -72253935 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 760 2818 189 72 103 chr17 23018716 23018985 -72253666 + RLTR40 LTR ERVK 569 796 -21 3 760 518 261 62 5 chr17 23019441 23019634 -72253017 - L1M2 LINE L1 -687 5613 5410 3 760 239 293 94 53 chr17 23019727 23020026 -72252625 + L1M2 LINE L1 3372 3682 -2461 3 760 222 118 0 0 chr17 23020050 23020084 -72252567 + (TTA)n Simple_repeat Simple_repeat 2 35 0 3 760 343 242 17 0 chr17 23020164 23020284 -72252367 + CT-rich Low_complexity Low_complexity 3 124 0 3 760 284 354 83 33 chr17 23020424 23020725 -72251926 - Lx8 LINE L1 -292 7181 6866 4 760 429 164 40 79 chr17 23020746 23020872 -72251779 - RMER1B Other Other -4 1062 942 4 760 297 0 0 0 chr17 23021341 23021374 -72251277 + (A)n Simple_repeat Simple_repeat 1 33 0 4 760 323 276 124 49 chr17 23021634 23021859 -72250792 - L1M4 LINE L1 -1326 4820 4579 4 760 326 321 83 54 chr17 23022166 23022287 -72250364 - L1M4 LINE L1 -3301 2845 2731 4 760 512 271 21 0 chr17 23022287 23022431 -72250220 - B1_Mus2 SINE Alu 0 147 1 4 760 423 283 97 36 chr17 23022431 23022753 -72249898 - L1M4 LINE L1 -3416 2730 2389 4 760 1690 183 128 9 chr17 23023174 23023510 -72249141 - ORR1C1 LTR MaLR -2 376 1 4 760 386 333 29 14 chr17 23024479 23024689 -72247962 - B3 SINE B2 -2 214 2 4 760 24 0 0 0 chr17 23024850 23024874 -72247777 + AT_rich Low_complexity Low_complexity 1 24 0 4 760 3424 198 110 15 chr17 23025430 23026183 -72246468 - Lx5 LINE L1 -75 6975 6151 4 760 3139 153 50 21 chr17 23026181 23026358 -72246293 - L1_Mur2 LINE L1 -2597 3280 3105 5 760 257 0 0 29 chr17 23026358 23026392 -72246259 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 5 760 1140 69 7 0 chr17 23026392 23026536 -72246115 - B1_Mus1 SINE Alu -3 145 1 5 760 3139 153 50 21 chr17 23026536 23027033 -72245618 - L1_Mur2 LINE L1 -2773 3104 2586 5 760 2742 193 60 33 chr17 23027033 23027773 -72244878 - RLTR13D2 LTR ERVK 0 1023 1 5 760 2483 170 11 8 chr17 23027773 23028300 -72244351 - L1_Mur2 LINE L1 -3287 2590 2062 5 760 2431 177 83 8 chr17 23028321 23028812 -72243839 + RLTR11A LTR ERVK 1 528 0 5 760 1952 179 72 2 chr17 23028812 23029323 -72243328 - L1_Mur2 LINE L1 -3891 1986 1440 5 760 1598 194 58 23 chr17 23029323 23029835 -72242816 - RLTR12A LTR ERVK -9 559 1 5 760 1283 170 168 11 chr17 23029835 23030323 -72242328 - L1_Mur2 LINE L1 -4429 1448 889 5 760 24 0 0 0 chr17 23030569 23030593 -72242058 + AT_rich Low_complexity Low_complexity 1 24 0 5 760 439 305 94 5 chr17 23031308 23031499 -72241152 - B3 SINE B2 -8 208 1 5 760 396 218 46 73 chr17 23031535 23031644 -72241007 + B1_Mus1 SINE Alu 37 142 -6 5 760 188 103 0 49 chr17 23032298 23032339 -72240312 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 5 760 451 326 7 22 chr17 23032365 23032503 -72240148 + B1F1 SINE Alu 13 148 -1 6 760 251 294 45 45 chr17 23033467 23033599 -72239052 + MMSAT4 Satellite Satellite 31 162 -6 6 760 439 269 40 4 chr17 23033676 23033873 -72238778 + MMSAT4 Satellite Satellite 1 204 -6 6 760 526 219 33 67 chr17 23033897 23034173 -72238478 + MMSAT4 Satellite Satellite 1 266 -1 6 760 1225 34 7 0 chr17 23034173 23034319 -72238332 - B1_Mm SINE Alu 0 147 1 6 760 385 244 2 38 chr17 23034319 23034558 -72238093 + MMSAT4 Satellite Satellite 1 230 0 6 760 280 197 16 32 chr17 23034965 23035028 -72237623 - PB1D9 SINE Alu -1 119 58 6 760 11586 28 0 0 chr17 23035832 23037935 -72234716 - L1Md_T LINE L1 0 6582 4479 6 760 313 276 43 43 chr17 23037978 23038191 -72234460 - MMSAT4 Satellite Satellite -5 213 1 6 760 17489 49 9 1 chr17 23038965 23041964 -72230687 - L1Md_F3 LINE L1 0 6584 3560 6 760 28170 41 2 1 chr17 23041963 23046319 -72226332 - L1Md_T LINE L1 0 7442 3107 6 760 7947 32 4 3 chr17 23046314 23047558 -72225093 - L1Md_F3 LINE L1 0 6584 5340 6 760 6609 94 1 0 chr17 23047546 23048532 -72224119 + L1_Mm LINE L1 3471 4457 -1426 7 760 33 0 0 0 chr17 23048532 23048565 -72224086 + AT_rich Low_complexity Low_complexity 1 33 0 7 760 9436 84 3 7 chr17 23048566 23049986 -72222665 - L1_Mm LINE L1 -2944 2939 1526 7 760 1600 147 8 0 chr17 23050381 23050632 -72222019 + Lx LINE L1 6086 6338 -316 7 760 344 260 0 0 chr17 23050671 23050744 -72221907 - B3 SINE B2 -118 98 26 7 760 3905 147 37 18 chr17 23050848 23051529 -72221122 + Lx LINE L1 5961 6654 0 7 760 1050 110 7 0 chr17 23051531 23051677 -72220974 + B1_Mus2 SINE Alu 1 147 0 7 760 573 64 0 0 chr17 23051680 23051758 -72220893 + (GAAA)n Simple_repeat Simple_repeat 3 80 0 7 760 2109 168 124 13 chr17 23051762 23052238 -72220413 + RLTR21 LTR ERVK 614 1142 -430 7 760 711 148 14 27 chr17 23052266 23052412 -72220239 + Lx2 LINE L1 6780 6923 -74 7 760 543 56 0 0 chr17 23052424 23052495 -72220156 + (TG)n Simple_repeat Simple_repeat 2 72 0 8 760 701 292 86 109 chr17 23052571 23052804 -72219847 + RLTR21 LTR ERVK 1059 1258 -314 8 760 195 114 0 0 chr17 23052804 23052839 -72219812 + (TCTG)n Simple_repeat Simple_repeat 4 38 0 8 760 701 292 86 109 chr17 23052839 23053128 -72219523 + RLTR21 LTR ERVK 1259 1569 -3 8 760 339 324 42 83 chr17 23053346 23053538 -72219113 - B3A SINE B2 -2 196 13 8 760 288 343 10 10 chr17 23055618 23055718 -72216933 + B3A SINE B2 1 100 -98 8 760 439 350 126 0 chr17 23057180 23057394 -72215257 + MTC LTR MaLR 53 293 -128 8 760 226 185 0 44 chr17 23057946 23058014 -72214637 + T-rich Low_complexity Low_complexity 5 69 0 8 760 455 48 16 0 chr17 23058004 23058066 -72214585 + (TC)n Simple_repeat Simple_repeat 2 64 0 8 760 947 73 0 0 chr17 23058066 23058190 -72214461 - B1_Mm SINE Alu 0 147 24 8 760 276 265 14 14 chr17 23058193 23058262 -72214389 - B1_Mur1 SINE Alu 0 149 81 8 760 331 321 37 30 chr17 23058381 23058516 -72214135 - B1_Mur1 SINE Alu -5 144 9 9 760 1107 314 91 47 chr17 23058821 23059329 -72213322 + RLTR20B3 LTR ERVK 21 550 -27 9 760 2089 325 36 60 chr17 23059557 23060547 -72212104 + RMER1C Other Other 375 1164 -178 9 760 2195 129 3 0 chr17 23060547 23060873 -72211778 - ORR1A2 LTR MaLR 0 327 1 9 760 2089 317 37 64 chr17 23060873 23061028 -72211623 + RMER1C Other Other 1165 1326 -16 9 760 330 321 65 30 chr17 23061187 23061386 -72211265 - L1MEg LINE L1 -4567 1517 1312 9 760 3046 306 45 18 chr17 23061405 23062483 -72210168 + Lx5 LINE L1 5926 7033 -17 9 760 252 0 0 0 chr17 23062484 23062512 -72210139 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 9 760 2892 36 0 14 chr17 23062920 23063282 -72209369 - L1Md_F3 LINE L1 -1 6583 6227 9 760 429 326 30 10 chr17 23064155 23064353 -72208298 + B3 SINE B2 2 203 -13 9 760 378 179 10 21 chr17 23065819 23065916 -72206735 + (TATATG)n Simple_repeat Simple_repeat 1 96 0 9 760 531 0 0 0 chr17 23067417 23067476 -72205175 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 761 21 36 0 0 chr17 23068825 23068853 -72203798 + AT_rich Low_complexity Low_complexity 1 28 0 1 761 459 35 0 0 chr17 23071588 23071645 -72201006 + (CATA)n Simple_repeat Simple_repeat 3 59 0 1 761 1707 219 17 26 chr17 23071645 23072114 -72200537 - L1_Mur3 LINE L1 -2064 3816 3352 1 761 1339 52 0 12 chr17 23072163 23072415 -72200236 + (TTC)n Simple_repeat Simple_repeat 1 249 0 1 761 256 300 137 20 chr17 23072426 23072528 -72200123 - B1_Mus1 SINE Alu -25 123 10 1 761 388 246 34 8 chr17 23072533 23072652 -72199999 - L1_Mur3 LINE L1 -2907 2973 2852 1 761 2210 69 3 20 chr17 23072654 23072719 -72199932 - Lx3A LINE L1 -155 6826 6766 1 761 384 22 0 0 chr17 23072719 23072764 -72199887 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 761 2210 69 3 20 chr17 23072764 23072992 -72199659 - Lx3A LINE L1 -216 6765 6538 1 761 4217 153 29 30 chr17 23072992 23073813 -72198838 + RMER16-int LTR ERVK 3945 4764 -642 1 761 2238 90 17 62 chr17 23073813 23074167 -72198484 - L1Md_F2 LINE L1 -13 6569 6232 1 761 7355 56 6 16 chr17 23074164 23075125 -72197526 + L1Md_F2 LINE L1 5618 6569 -13 1 761 2839 144 23 10 chr17 23075125 23075638 -72197013 - RMER16-int LTR ERVK -642 4764 4245 1 761 7840 57 4 4 chr17 23075704 23076780 -72195871 - L1Md_F2 LINE L1 -1 6581 5507 1 761 1489 134 34 67 chr17 23076780 23077077 -72195574 - RMER16-int LTR ERVK -1175 4231 3945 1 761 2210 69 3 20 chr17 23077077 23077305 -72195346 + Lx3A LINE L1 6538 6765 -216 1 761 420 20 0 0 chr17 23077305 23077354 -72195297 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 761 2210 69 3 20 chr17 23077354 23077419 -72195232 + Lx3A LINE L1 6766 6826 -155 1 761 388 246 34 8 chr17 23077421 23077540 -72195111 + L1_Mur3 LINE L1 2852 2973 -2907 1 761 256 300 137 20 chr17 23077545 23077647 -72195004 + B1_Mus1 SINE Alu 10 123 -25 1 761 1372 49 0 12 chr17 23077658 23077907 -72194744 + (GAA)n Simple_repeat Simple_repeat 1 246 0 1 761 1707 219 17 26 chr17 23077956 23078425 -72194226 + L1_Mur3 LINE L1 3352 3816 -2064 1 761 351 44 0 0 chr17 23078425 23078470 -72194181 + (TATG)n Simple_repeat Simple_repeat 3 47 0 1 761 21 36 0 0 chr17 23081205 23081233 -72191418 + AT_rich Low_complexity Low_complexity 1 28 0 1 761 423 0 0 0 chr17 23082582 23082629 -72190022 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 761 390 170 21 11 chr17 23084130 23084225 -72188426 + (CATATA)n Simple_repeat Simple_repeat 1 96 0 1 761 378 337 30 25 chr17 23085691 23085892 -72186759 - B3 SINE B2 -13 203 2 1 761 2942 34 0 14 chr17 23086767 23087129 -72185522 + L1Md_F3 LINE L1 6227 6583 -1 1 761 255 31 0 0 chr17 23087531 23087563 -72185088 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 1 761 3056 308 46 18 chr17 23087563 23088641 -72184010 - Lx5 LINE L1 -16 7034 5926 1 761 229 246 18 0 chr17 23088701 23088758 -72183893 + L1M2 LINE L1 2469 2526 -4323 1 761 1924 323 43 67 chr17 23089019 23089170 -72183481 - RMER1C Other Other -16 1326 1165 1 761 2023 148 6 0 chr17 23089170 23089495 -72183156 + ORR1A2 LTR MaLR 1 327 0 1 761 1924 334 39 61 chr17 23089495 23090436 -72182215 - RMER1C Other Other -178 1164 375 1 761 631 262 68 47 chr17 23090609 23090871 -72181780 - RLTR20B3 LTR ERVK -307 271 21 1 761 321 328 37 30 chr17 23091176 23091311 -72181340 + B1_Mur1 SINE Alu 9 144 -5 1 761 284 250 14 14 chr17 23091430 23091499 -72181152 + B1_Mur1 SINE Alu 81 149 0 1 761 401 193 49 114 chr17 23091504 23091614 -72181037 + B4 SINE B4 111 214 -78 1 761 620 26 13 0 chr17 23091614 23091692 -72180959 + (GAAAA)n Simple_repeat Simple_repeat 3 81 0 1 761 531 31 0 0 chr17 23091692 23091757 -72180894 + (CAAGG)n Simple_repeat Simple_repeat 1 65 0 1 761 401 193 49 114 chr17 23091757 23091768 -72180883 + B4 SINE B4 215 224 -68 1 761 188 229 0 32 chr17 23091775 23091838 -72180813 + A-rich Low_complexity Low_complexity 1 61 0 1 761 409 365 126 0 chr17 23092385 23092599 -72180052 - MTC LTR MaLR -128 293 53 1 761 276 380 0 0 chr17 23094054 23094154 -72178497 - B3A SINE B2 -98 100 1 1 761 210 286 88 77 chr17 23096087 23096178 -72176473 + B3A SINE B2 13 104 -94 1 761 6512 196 25 8 chr17 23096178 23097626 -72175025 + L1_Mur2 LINE L1 1921 3393 -2493 1 761 2157 187 3 16 chr17 23097648 23098137 -72174514 - L1VL4 LINE L1 -2243 1316 805 1 761 396 0 0 0 chr17 23098137 23098181 -72174470 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 761 2074 239 57 92 chr17 23098181 23098849 -72173802 - L1VL4 LINE L1 -5498 804 193 1 761 11809 146 25 101 chr17 23098858 23101459 -72171192 + L1_Mur2 LINE L1 3408 5811 -66 1 761 5921 192 14 9 chr17 23101460 23102569 -72170082 + Lx4A LINE L1 5937 7051 -7 1 761 205 205 0 0 chr17 23102573 23102612 -72170039 + A-rich Low_complexity Low_complexity 1 39 0 1 761 268 347 6 6 chr17 23103488 23103659 -72168992 + (CA)n Simple_repeat Simple_repeat 2 172 0 1 761 236 355 12 0 chr17 23103719 23103885 -72168766 + (CA)n Simple_repeat Simple_repeat 2 169 0 1 761 11600 80 6 73 chr17 23105122 23106127 -72166524 + RLTR22_Mus LTR ERVK 1 912 -896 1 761 2369 70 11 58 chr17 23106127 23106490 -72166161 - L1_Mus2 LINE L1 -3 6563 6218 1 761 11600 80 6 73 chr17 23106490 23107315 -72165336 + RLTR22_Mus LTR ERVK 913 1708 -100 1 761 39626 15 0 6 chr17 23107369 23113779 -72158872 - L1Md_A LINE L1 -1 6581 214 1 761 253 383 19 0 chr17 23113914 23114021 -72158630 - B1_Mur4 SINE Alu -33 117 9 1 761 28 0 0 0 chr17 23115830 23115858 -72156793 + AT_rich Low_complexity Low_complexity 1 28 0 1 761 22 0 0 0 chr17 23116522 23116544 -72156107 + AT_rich Low_complexity Low_complexity 1 22 0 1 761 227 152 22 0 chr17 23116794 23116840 -72155811 + GA-rich Low_complexity Low_complexity 2 48 0 1 761 423 98 0 0 chr17 23116846 23116907 -72155744 + (GAAA)n Simple_repeat Simple_repeat 2 62 0 1 761 351 230 23 9 chr17 23116917 23117090 -72155561 + L1_Rod LINE L1 5142 5363 -780 1 761 15791 105 20 6 chr17 23117091 23120040 -72152611 + L1Md_F LINE L1 596 3590 -2293 1 761 1591 34 0 72 chr17 23120041 23120263 -72152388 + ORR1A1 LTR MaLR 141 346 0 1 761 13176 65 22 3 chr17 23120263 23122023 -72150628 + ORR1A1-int LTR MaLR 1 1792 0 1 761 367 39 0 0 chr17 23122023 23122075 -72150576 + ORR1A1 LTR MaLR 1 52 -294 1 761 1800 285 68 33 chr17 23122106 23122698 -72149953 - Lx5 LINE L1 -81 7379 6455 1 761 306 0 0 0 chr17 23122698 23122732 -72149919 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 1 761 1710 305 100 61 chr17 23122732 23123182 -72149469 - Lx5 LINE L1 -707 6753 6049 1 761 29 28 0 0 chr17 23123182 23123218 -72149433 + AT_rich Low_complexity Low_complexity 1 36 0 1 761 8450 179 136 0 chr17 23123218 23124985 -72147666 + L1_Mur1 LINE L1 3575 5581 -305 1 761 7368 72 3 10 chr17 23124985 23125975 -72146676 + L1Md_F2 LINE L1 5587 6569 -13 1 761 4023 165 34 27 chr17 23125975 23126789 -72145862 - RMER16-int LTR ERVK -642 4764 3945 1 761 2148 80 3 27 chr17 23126789 23127085 -72145566 + Lx3A LINE L1 6538 6826 -155 1 761 395 227 25 0 chr17 23127087 23127206 -72145445 + L1_Mur3 LINE L1 2852 2973 -2907 1 761 324 294 135 19 chr17 23127209 23127313 -72145338 + B1_Mus2 SINE Alu 7 122 -25 1 761 901 62 0 15 chr17 23127324 23127455 -72145196 + (GAA)n Simple_repeat Simple_repeat 1 129 0 1 761 1593 239 13 21 chr17 23127499 23127973 -72144678 + L1_Mur3 LINE L1 3347 3816 -2064 1 761 297 0 0 0 chr17 23127973 23128006 -72144645 + (TATG)n Simple_repeat Simple_repeat 3 35 0 1 761 435 19 0 0 chr17 23132141 23132193 -72140458 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 761 608 195 18 6 chr17 23133657 23133827 -72138824 + (TA)n Simple_repeat Simple_repeat 1 172 0 1 761 335 337 63 5 chr17 23135292 23135483 -72137168 - B3 SINE B2 -13 203 2 1 761 2993 28 0 3 chr17 23136344 23136704 -72135947 + L1Md_F3 LINE L1 6225 6583 -1 1 761 333 118 0 0 chr17 23136724 23136775 -72135876 + (GAAAA)n Simple_repeat Simple_repeat 4 54 0 1 761 252 0 0 0 chr17 23137146 23137174 -72135477 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 1 761 2943 310 45 19 chr17 23137174 23138254 -72134397 - Lx5 LINE L1 -16 7034 5926 1 761 301 335 59 30 chr17 23138273 23138476 -72134175 + L1MEg LINE L1 1312 1520 -4564 1 761 2102 321 46 36 chr17 23138632 23138787 -72133864 - RMER1C Other Other -16 1326 1165 1 761 2114 138 3 0 chr17 23138787 23139113 -72133538 + ORR1A2 LTR MaLR 1 327 0 1 761 2102 338 45 31 chr17 23139113 23140102 -72132549 - RMER1C Other Other -178 1164 390 1 761 1139 275 122 66 chr17 23140333 23140835 -72131816 - RLTR20B3 LTR ERVK -27 550 21 1 761 271 346 38 30 chr17 23141136 23141267 -72131384 + B1_Mur1 SINE Alu 9 140 -9 1 761 280 265 14 14 chr17 23141390 23141459 -72131192 + B1_Mur1 SINE Alu 81 149 0 1 761 889 62 0 0 chr17 23141462 23141574 -72131077 + B1_Mm SINE Alu 24 135 -12 1 761 964 131 11 0 chr17 23141575 23141750 -72130901 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 1 761 441 355 126 0 chr17 23142306 23142520 -72130131 - MTC LTR MaLR -128 293 53 1 761 1394 52 6 0 chr17 23143353 23143526 -72129125 + B2_Mm1a SINE B2 1 174 -19 1 761 225 94 0 0 chr17 23143527 23143559 -72129092 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1 761 286 343 10 10 chr17 23144210 23144310 -72128341 - B3A SINE B2 -98 100 1 1 761 3879 194 20 5 chr17 23146334 23147176 -72125475 + Lx4A LINE L1 1921 2775 -3111 1 761 3424 151 25 16 chr17 23147189 23147817 -72124834 + Lx4A LINE L1 4862 5495 -382 1 761 6127 203 38 16 chr17 23148058 23149501 -72123150 + Lx4A LINE L1 5473 7051 -7 1 761 222 118 0 0 chr17 23149511 23149545 -72123106 + (A)n Simple_repeat Simple_repeat 1 34 0 1 761 268 347 6 6 chr17 23150420 23150591 -72122060 + (CA)n Simple_repeat Simple_repeat 2 172 0 1 761 222 321 19 0 chr17 23150690 23150858 -72121793 + (CATATA)n Simple_repeat Simple_repeat 1 171 0 1 761 11400 81 5 78 chr17 23152523 23153527 -72119124 + RLTR22_Mus LTR ERVK 1 912 -896 1 761 2267 93 8 55 chr17 23153527 23153890 -72118761 - L1_Mus2 LINE L1 -3 6563 6218 1 761 11400 81 5 78 chr17 23153890 23154726 -72117925 + RLTR22_Mus LTR ERVK 913 1708 -100 1 761 219 392 19 0 chr17 23154899 23155006 -72117645 - B1_Mur4 SINE Alu -33 117 9 1 761 28 0 0 0 chr17 23156816 23156844 -72115807 + AT_rich Low_complexity Low_complexity 1 28 0 1 761 23 0 0 0 chr17 23157508 23157531 -72115120 + AT_rich Low_complexity Low_complexity 1 23 0 1 761 335 121 17 0 chr17 23157778 23157836 -72114815 + (GGA)n Simple_repeat Simple_repeat 2 60 0 1 761 251 309 39 7 chr17 23157888 23158041 -72114610 + L1M2 LINE L1 5206 5363 -780 1 761 27749 97 64 2 chr17 23158041 23162738 -72109913 + L1Md_F2 LINE L1 596 5585 -298 1 761 7463 73 2 5 chr17 23162739 23163725 -72108926 + L1Md_F2 LINE L1 5587 6569 -13 1 761 2776 146 34 8 chr17 23163725 23164229 -72108422 - RMER16-int LTR ERVK -642 4764 4248 1 761 22974 27 0 2 chr17 23164265 23166533 -72106118 - L1Md_T LINE L1 -13 6569 4307 1 761 2939 21 0 0 chr17 23166533 23166870 -72105781 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 761 29976 37 0 2 chr17 23166870 23170591 -72102060 - L1Md_T LINE L1 -1577 4306 629 1 761 241 287 53 11 chr17 23170611 23170706 -72101945 + L1M2 LINE L1 2428 2526 -4323 2 761 1931 317 51 48 chr17 23170967 23171122 -72101529 - RMER1C Other Other -16 1326 1165 2 761 2054 147 3 0 chr17 23171122 23171448 -72101203 + ORR1A2 LTR MaLR 1 327 0 2 761 1931 335 43 41 chr17 23171448 23172438 -72100213 - RMER1C Other Other -178 1164 389 2 761 1053 279 114 67 chr17 23172667 23173171 -72099480 - RLTR20B3 LTR ERVK -27 550 20 2 761 311 307 38 30 chr17 23173474 23173605 -72099046 + B1_Mur1 SINE Alu 9 140 -9 2 761 289 250 14 14 chr17 23173728 23173797 -72098854 + B1_Mur1 SINE Alu 81 149 0 2 761 615 97 3 1 chr17 23173800 23173896 -72098755 + B1_Mus1 SINE Alu 24 120 0 2 761 292 192 39 0 chr17 23173901 23173979 -72098672 + A-rich Low_complexity Low_complexity 4 84 0 2 761 379 361 65 0 chr17 23174587 23174742 -72097909 - MTC LTR MaLR -203 218 54 2 761 286 343 10 10 chr17 23176198 23176298 -72096353 - B3A SINE B2 -98 100 1 2 761 11590 151 28 58 chr17 23176774 23180374 -72092277 + Lx4A LINE L1 3567 7051 -7 2 761 186 133 0 0 chr17 23180384 23180414 -72092237 + (A)n Simple_repeat Simple_repeat 1 30 0 2 761 268 347 6 6 chr17 23181290 23181461 -72091190 + (CA)n Simple_repeat Simple_repeat 2 172 0 2 761 226 349 11 11 chr17 23181554 23181728 -72090923 + (CATATA)n Simple_repeat Simple_repeat 6 179 0 2 761 11675 79 4 72 chr17 23183393 23184400 -72088251 + RLTR22_Mus LTR ERVK 1 912 -896 2 761 2352 67 11 58 chr17 23184400 23184762 -72087889 - L1_Mus2 LINE L1 -3 6563 6219 2 761 11675 79 4 72 chr17 23184762 23185586 -72087065 + RLTR22_Mus LTR ERVK 913 1708 -100 2 761 237 369 12 0 chr17 23185781 23185865 -72086786 - B1_Mur4 SINE Alu -57 93 9 2 761 25 0 0 0 chr17 23187687 23187712 -72084939 + AT_rich Low_complexity Low_complexity 1 25 0 2 761 22 0 0 0 chr17 23188378 23188400 -72084251 + AT_rich Low_complexity Low_complexity 1 22 0 2 761 242 125 21 0 chr17 23188650 23188698 -72083953 + (GGA)n Simple_repeat Simple_repeat 3 51 0 2 761 252 41 39 39 chr17 23188691 23188742 -72083909 + (GAAA)n Simple_repeat Simple_repeat 4 54 0 2 761 386 268 44 8 chr17 23188752 23188930 -72083721 + L1M2 LINE L1 5156 5370 -773 2 761 21653 123 28 4 chr17 23188928 23193610 -72079041 + L1Md_T LINE L1 600 5581 -299 2 761 7608 68 2 1 chr17 23193610 23194594 -72078057 + L1Md_T LINE L1 5587 6571 -11 2 761 4184 150 37 31 chr17 23194594 23195408 -72077243 - RMER16-int LTR ERVK -643 4763 3945 2 761 2019 87 7 53 chr17 23195408 23195711 -72076940 + Lx3A LINE L1 6538 6826 -155 2 761 386 231 34 17 chr17 23195713 23195832 -72076819 + L1_Mur3 LINE L1 2852 2972 -2908 2 761 296 300 137 20 chr17 23195838 23195940 -72076711 + B1_Mus1 SINE Alu 10 123 -25 2 761 220 372 107 15 chr17 23195940 23195963 -72076688 + ID_B1 SINE B4 106 224 0 2 761 693 0 0 0 chr17 23195963 23196040 -72076611 + (GAA)n Simple_repeat Simple_repeat 1 77 0 2 761 1625 251 21 25 chr17 23196046 23196633 -72076018 + L1_Mur3 LINE L1 3249 3847 -2296 2 761 297 0 0 0 chr17 23196633 23196666 -72075985 + (TATG)n Simple_repeat Simple_repeat 3 35 0 2 761 534 321 55 40 chr17 23196666 23196679 -72075972 + L1_Mur3 LINE L1 3848 3858 -2285 2 762 468 0 0 0 chr17 23200801 23200853 -72071798 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 762 764 173 6 16 chr17 23202323 23202505 -72070146 + (TA)n Simple_repeat Simple_repeat 1 180 0 2 762 335 337 63 5 chr17 23203970 23204161 -72068490 - B3 SINE B2 -13 203 2 2 762 2964 33 0 3 chr17 23205023 23205383 -72067268 + L1Md_F3 LINE L1 6225 6583 -1 2 762 284 70 0 23 chr17 23205403 23205447 -72067204 + (GAAAA)n Simple_repeat Simple_repeat 2 44 0 2 762 288 0 0 0 chr17 23205818 23205850 -72066801 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 2 762 2957 311 45 17 chr17 23205850 23206928 -72065723 - Lx5 LINE L1 -16 7034 5926 2 762 301 335 59 30 chr17 23206947 23207150 -72065501 + L1MEg LINE L1 1312 1520 -4564 2 762 2062 321 48 36 chr17 23207306 23207461 -72065190 - RMER1C Other Other -16 1326 1165 2 762 2114 138 3 0 chr17 23207461 23207787 -72064864 + ORR1A2 LTR MaLR 1 327 0 2 762 2062 338 46 31 chr17 23207787 23208775 -72063876 - RMER1C Other Other -178 1164 390 2 762 1083 284 104 55 chr17 23209006 23209439 -72063212 - RLTR20B3 LTR ERVK -27 550 97 2 762 271 346 38 30 chr17 23209813 23209944 -72062707 + B1_Mur1 SINE Alu 9 140 -9 2 762 280 265 14 14 chr17 23210067 23210136 -72062515 + B1_Mur1 SINE Alu 81 149 0 2 762 896 54 0 0 chr17 23210139 23210251 -72062400 + B1_Mm SINE Alu 24 135 -12 2 762 1023 102 6 17 chr17 23210252 23210431 -72062220 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 2 762 441 355 126 0 chr17 23210987 23211201 -72061450 - MTC LTR MaLR -128 293 53 2 762 286 343 10 10 chr17 23212664 23212764 -72059887 - B3A SINE B2 -98 100 1 2 762 6378 193 30 8 chr17 23214789 23215650 -72057001 + L1_Mur2 LINE L1 1921 2805 -3081 2 762 207 0 0 0 chr17 23215650 23215673 -72056978 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2 762 6378 193 30 8 chr17 23215673 23216253 -72056398 + L1_Mur2 LINE L1 2806 3392 -2494 2 762 2267 220 14 67 chr17 23216275 23217472 -72055179 - L1VL4 LINE L1 -2243 1316 193 2 762 11489 143 24 13 chr17 23217481 23219546 -72053105 + L1_Mur2 LINE L1 3408 5495 -382 2 762 1837 158 53 3 chr17 23219787 23220110 -72052541 + L1_Mur2 LINE L1 5473 5811 -66 2 762 5938 191 14 9 chr17 23220111 23221221 -72051430 + Lx4A LINE L1 5937 7051 -7 2 762 186 133 0 0 chr17 23221231 23221261 -72051390 + (A)n Simple_repeat Simple_repeat 1 30 0 2 762 223 314 25 6 chr17 23221882 23222039 -72050612 + (CA)n Simple_repeat Simple_repeat 1 160 0 2 762 268 347 6 6 chr17 23222137 23222308 -72050343 + (CA)n Simple_repeat Simple_repeat 2 172 0 2 762 222 331 6 30 chr17 23222407 23222575 -72050076 + (CATA)n Simple_repeat Simple_repeat 4 167 0 2 762 11455 81 5 76 chr17 23224240 23225243 -72047408 + RLTR22_Mus LTR ERVK 1 912 -896 2 762 2328 76 11 58 chr17 23225243 23225606 -72047045 - L1_Mus2 LINE L1 -3 6563 6218 2 762 11455 81 5 76 chr17 23225606 23226439 -72046212 + RLTR22_Mus LTR ERVK 913 1708 -100 2 762 226 392 19 0 chr17 23226612 23226719 -72045932 - B1_Mur4 SINE Alu -33 117 9 2 762 28 0 0 0 chr17 23228529 23228557 -72044094 + AT_rich Low_complexity Low_complexity 1 28 0 2 762 25 0 0 0 chr17 23229221 23229246 -72043405 + AT_rich Low_complexity Low_complexity 1 25 0 2 762 275 146 18 0 chr17 23229493 23229548 -72043103 + GA-rich Low_complexity Low_complexity 2 57 0 2 762 189 0 0 0 chr17 23229554 23229575 -72043076 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 2 762 254 319 35 6 chr17 23229587 23229757 -72042894 + L1M2 LINE L1 5189 5363 -780 2 762 26191 97 64 4 chr17 23229757 23234462 -72038189 + L1Md_F2 LINE L1 596 5585 -298 2 762 7474 73 3 5 chr17 23234463 23235448 -72037203 + L1Md_F2 LINE L1 5587 6569 -13 2 762 2599 146 34 16 chr17 23235448 23235956 -72036695 - RMER16-int LTR ERVK -642 4764 4248 2 762 37209 35 2 6 chr17 23235978 23242172 -72030479 - L1Md_T LINE L1 0 6582 421 2 762 233 280 64 11 chr17 23242193 23242287 -72030364 + L1M2 LINE L1 2428 2526 -4323 2 762 1695 319 36 63 chr17 23242547 23242702 -72029949 - RMER1C Other Other -16 1326 1165 2 762 2146 138 3 0 chr17 23242702 23243028 -72029623 + ORR1A2 LTR MaLR 1 327 0 2 762 1695 329 33 56 chr17 23243028 23243973 -72028678 - RMER1C Other Other -178 1164 375 2 762 1158 298 96 77 chr17 23244246 23244766 -72027885 - RLTR20B3 LTR ERVK -27 550 21 2 762 287 339 38 30 chr17 23245065 23245196 -72027455 + B1_Mur1 SINE Alu 9 140 -9 2 762 290 250 14 14 chr17 23245319 23245388 -72027263 + B1_Mur1 SINE Alu 81 149 0 2 762 906 54 0 0 chr17 23245391 23245503 -72027148 + B1_Mm SINE Alu 24 135 -12 2 762 956 141 0 6 chr17 23245504 23245682 -72026969 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 2 762 455 306 217 64 chr17 23246185 23246452 -72026199 - MTC LTR MaLR -46 361 53 2 762 246 372 0 0 chr17 23247920 23248006 -72024645 - B3A SINE B2 -112 86 1 2 762 10062 162 25 18 chr17 23248482 23252070 -72020581 + Lx4A LINE L1 3567 7051 -7 2 762 186 133 0 0 chr17 23252080 23252110 -72020541 + (A)n Simple_repeat Simple_repeat 1 30 0 2 762 268 347 6 6 chr17 23252987 23253158 -72019493 + (CA)n Simple_repeat Simple_repeat 2 172 0 2 762 233 306 0 48 chr17 23253257 23253425 -72019226 + (CATA)n Simple_repeat Simple_repeat 4 163 0 2 762 6592 81 17 12 chr17 23255087 23256038 -72016613 + RLTR22_Mus LTR ERVK 1 956 -852 2 762 432 193 17 0 chr17 23256095 23256199 -72016452 - L1_Mus4 LINE L1 -9 6627 6522 2 762 2216 90 15 45 chr17 23256199 23256536 -72016115 - IAPLTR2b LTR ERVK 0 327 1 2 762 432 193 17 0 chr17 23256536 23256550 -72016101 - L1_Mus4 LINE L1 -115 6521 6508 2 762 5473 61 13 18 chr17 23256550 23257313 -72015338 - IAPEz-int LTR ERVK -14 6467 5709 2 762 2997 17 0 0 chr17 23257304 23257661 -72014990 - IAPEz-int LTR ERVK -2124 4357 4001 2 762 18926 56 48 18 chr17 23257659 23260285 -72012366 - IAPEz-int LTR ERVK -3707 2774 70 2 762 614 274 73 26 chr17 23260289 23260364 -72012287 - L1_Mus2 LINE L1 -37 6960 6876 2 762 2216 90 15 45 chr17 23260364 23260701 -72011950 - IAPLTR2b LTR ERVK 0 327 1 2 762 1917 70 8 4 chr17 23260701 23260965 -72011686 - L1_Mus2 LINE L1 -112 6526 6219 2 762 5680 87 1 12 chr17 23260983 23261791 -72010860 + RLTR22_Mus LTR ERVK 910 1708 -100 2 762 244 369 12 0 chr17 23261988 23262072 -72010579 - B1_Mur4 SINE Alu -57 93 9 2 762 21 36 0 0 chr17 23263884 23263912 -72008739 + AT_rich Low_complexity Low_complexity 1 28 0 2 762 22 0 0 0 chr17 23264576 23264598 -72008053 + AT_rich Low_complexity Low_complexity 1 22 0 2 762 224 114 29 0 chr17 23264844 23264879 -72007772 + (GGA)n Simple_repeat Simple_repeat 3 38 0 2 762 369 32 15 46 chr17 23264879 23264944 -72007707 + (GAAA)n Simple_repeat Simple_repeat 4 66 0 2 762 333 224 21 9 chr17 23264954 23265124 -72007527 + L1_Rod LINE L1 5142 5360 -783 2 762 20454 126 23 5 chr17 23265127 23269829 -72002822 + L1Md_F2 LINE L1 596 5580 -297 2 762 7451 74 2 8 chr17 23269829 23270818 -72001833 + L1Md_F2 LINE L1 5587 6569 -13 2 762 3849 159 34 26 chr17 23270818 23271631 -72001020 - RMER16-int LTR ERVK -642 4764 3945 2 762 1894 96 25 0 chr17 23271631 23271852 -72000799 + Lx3A LINE L1 6538 6759 -222 2 762 696 56 0 0 chr17 23271852 23271941 -72000710 + (TA)n Simple_repeat Simple_repeat 1 89 0 2 762 1894 96 25 0 chr17 23271941 23272000 -72000651 + Lx3A LINE L1 6760 6823 -158 2 762 365 256 24 0 chr17 23271997 23272122 -72000529 + L1_Mur3 LINE L1 2846 2973 -2907 2 762 315 319 132 16 chr17 23272125 23272246 -72000405 + B1_Mus2 SINE Alu 7 141 -6 2 762 1171 90 6 11 chr17 23272246 23272291 -72000360 + (GAA)n Simple_repeat Simple_repeat 1 45 0 3 762 1473 39 0 0 chr17 23272291 23272471 -72000180 + (GGA)n Simple_repeat Simple_repeat 1 180 0 3 762 1171 90 6 11 chr17 23272471 23272605 -72000046 + (GAA)n Simple_repeat Simple_repeat 1 134 0 3 762 215 169 42 14 chr17 23272608 23272680 -71999971 + GA-rich Low_complexity Low_complexity 2 75 0 3 762 1462 244 13 21 chr17 23272724 23273198 -71999453 + L1_Mur3 LINE L1 3347 3816 -2064 2 762 261 0 0 0 chr17 23273198 23273227 -71999424 + (TATG)n Simple_repeat Simple_repeat 3 31 0 3 762 30918 38 4 7 chr17 23274091 23280187 -71992464 - L1Md_T LINE L1 -78 6504 421 3 762 251 287 53 11 chr17 23280208 23280303 -71992348 + L1M2 LINE L1 2428 2526 -4323 3 762 1997 319 36 63 chr17 23280563 23280718 -71991933 - RMER1C Other Other -16 1326 1165 3 762 2129 138 3 0 chr17 23280718 23281044 -71991607 + ORR1A2 LTR MaLR 1 327 0 3 762 1997 328 34 57 chr17 23281044 23281989 -71990662 - RMER1C Other Other -178 1164 375 3 762 1113 293 99 88 chr17 23282262 23282786 -71989865 - RLTR20B3 LTR ERVK -27 550 21 3 762 236 297 50 8 chr17 23282819 23282938 -71989713 + L1_Rod LINE L1 3797 3920 -1927 3 762 282 339 38 30 chr17 23283085 23283216 -71989435 + B1_Mur1 SINE Alu 9 140 -9 3 762 289 250 14 14 chr17 23283339 23283408 -71989243 + B1_Mur1 SINE Alu 81 149 0 3 762 931 81 0 0 chr17 23283411 23283535 -71989116 + B1_Mm SINE Alu 24 147 0 3 762 334 244 64 93 chr17 23283413 23283553 -71989098 + B4A SINE B4 111 246 -46 3 762 623 179 0 7 chr17 23283553 23283694 -71988957 + GA-rich Low_complexity Low_complexity 3 142 0 3 762 452 306 217 64 chr17 23284197 23284464 -71988187 - MTC LTR MaLR -46 361 53 3 762 243 372 0 0 chr17 23285932 23286018 -71986633 - B3A SINE B2 -112 86 1 3 762 9175 22 1 0 chr17 23288035 23289105 -71983546 + L1Md_T LINE L1 4516 5586 -297 3 762 8261 39 3 0 chr17 23289105 23290097 -71982554 + L1Md_T LINE L1 5587 6581 -1 3 762 231 36 0 0 chr17 23290164 23290192 -71982459 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 762 583 315 106 41 chr17 23290420 23290834 -71981817 - RLTR21 LTR ERVK -3 1569 1129 3 762 2286 194 116 52 chr17 23290835 23290990 -71981661 - RLTR21 LTR ERVK -266 1306 1165 3 762 297 0 0 0 chr17 23290990 23291023 -71981628 + (TA)n Simple_repeat Simple_repeat 2 34 0 3 762 2286 194 116 52 chr17 23291023 23291516 -71981135 - RLTR21 LTR ERVK -408 1164 617 3 762 258 32 0 0 chr17 23291520 23291551 -71981100 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 3 762 198 91 0 0 chr17 23291544 23291577 -71981074 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 3 762 1074 89 7 0 chr17 23291582 23291728 -71980923 - B1_Mus2 SINE Alu 0 147 1 3 762 3814 156 31 15 chr17 23291729 23292412 -71980239 - Lx LINE L1 0 6654 5961 3 762 376 233 0 0 chr17 23292516 23292589 -71980062 + B3 SINE B2 26 98 -118 3 762 189 0 0 0 chr17 23292794 23292815 -71979836 + (TA)n Simple_repeat Simple_repeat 1 21 0 3 762 13872 82 1 0 chr17 23293026 23294966 -71977685 + L1_Mm LINE L1 1526 3468 -2415 3 762 7722 34 1 0 chr17 23295090 23296292 -71976359 - L1Md_F2 LINE L1 -78 6504 5302 3 762 11658 50 2 0 chr17 23296303 23298454 -71974197 - L1Md_F2 LINE L1 0 6582 4428 3 762 882 282 11 19 chr17 23298917 23299177 -71973474 - Lx6 LINE L1 -26 7434 7177 3 762 465 313 54 0 chr17 23299349 23299515 -71973136 + MTE2b LTR MaLR 205 379 0 3 762 1048 259 23 75 chr17 23299596 23299899 -71972752 - MTD LTR MaLR 0 419 125 3 762 219 36 0 0 chr17 23299899 23299927 -71972724 + (CTCA)n Simple_repeat Simple_repeat 4 31 0 3 762 1048 259 23 75 chr17 23299927 23300061 -71972590 - MTD LTR MaLR -295 124 5 3 762 850 157 11 0 chr17 23300313 23300491 -71972160 + GA-rich Low_complexity Low_complexity 1 180 0 3 762 23 0 0 0 chr17 23300531 23300554 -71972097 + AT_rich Low_complexity Low_complexity 1 23 0 3 762 965 216 123 105 chr17 23300558 23300931 -71971720 + RLTR11A LTR ERVK 69 448 -80 3 762 216 111 0 0 chr17 23300931 23300967 -71971684 + (TCTCCC)n Simple_repeat Simple_repeat 6 41 0 3 762 378 0 0 0 chr17 23300978 23301020 -71971631 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 762 366 288 36 78 chr17 23301100 23301111 -71971540 - Lx7 LINE L1 -361 7335 7325 3 762 912 129 0 0 chr17 23301111 23301258 -71971393 + (GGAA)n Simple_repeat Simple_repeat 3 149 0 3 762 366 288 36 78 chr17 23301258 23301326 -71971325 - Lx7 LINE L1 -372 7324 7268 3 762 3080 51 10 18 chr17 23301326 23301725 -71970926 + MTA_Mm LTR MaLR 1 396 0 3 762 1146 274 126 38 chr17 23301725 23302201 -71970450 - Lx7 LINE L1 -429 7267 6741 3 762 923 269 59 100 chr17 23302207 23302612 -71970039 - MT2A LTR ERVL -76 525 1 3 762 22 0 0 0 chr17 23303831 23303853 -71968798 + AT_rich Low_complexity Low_complexity 1 22 0 3 762 24 53 0 0 chr17 23305502 23305540 -71967111 + AT_rich Low_complexity Low_complexity 1 38 0 3 762 727 298 68 16 chr17 23306439 23306688 -71965963 + ORR1D2 LTR MaLR 101 362 -8 3 762 1001 32 0 0 chr17 23306719 23306842 -71965809 + B1_Mm SINE Alu 25 147 0 3 762 606 298 19 5 chr17 23306866 23307082 -71965569 + Lx8 LINE L1 6644 6862 -611 3 762 238 397 27 14 chr17 23307710 23307858 -71964793 + Lx8 LINE L1 7192 7341 -132 3 762 495 33 0 0 chr17 23309360 23309421 -71963230 + (TG)n Simple_repeat Simple_repeat 1 61 0 3 762 493 367 7 0 chr17 23309422 23309569 -71963082 - B3 SINE B2 -68 148 1 3 762 1022 295 262 2 chr17 23311408 23311854 -71960797 - RMER15 LTR ERVL 0 575 14 3 762 24 0 0 0 chr17 23311854 23311878 -71960773 + AT_rich Low_complexity Low_complexity 1 24 0 3 762 978 214 22 15 chr17 23312139 23313918 -71958733 - MMSAT4 Satellite Satellite -8 1791 1 3 762 285 282 127 8 chr17 23314673 23314791 -71957860 - B1_Mur2 SINE Alu -1 148 17 3 762 327 320 26 7 chr17 23315224 23315375 -71957276 - MurSatRep1 Unknown Unknown -1378 759 606 3 762 405 367 35 0 chr17 23315504 23315703 -71956948 + B3 SINE B2 4 209 -7 3 762 221 220 34 0 chr17 23316017 23316076 -71956575 + CT-rich Low_complexity Low_complexity 2 62 0 3 762 303 146 0 0 chr17 23316080 23316135 -71956516 + (T)n Simple_repeat Simple_repeat 1 55 0 3 762 287 289 78 17 chr17 23316141 23316257 -71956394 - RMER10B LTR ERVL -57 341 219 3 762 459 0 0 0 chr17 23316270 23316321 -71956330 + (GA)n Simple_repeat Simple_repeat 1 51 0 3 762 300 354 20 15 chr17 23316952 23317150 -71955501 + B3 SINE B2 2 200 -16 3 762 1251 34 0 0 chr17 23318047 23318194 -71954457 + B1_Mm SINE Alu 1 147 0 3 762 214 272 0 36 chr17 23318276 23318313 -71954338 + A-rich Low_complexity Low_complexity 1 35 0 3 762 3886 103 70 8 chr17 23318313 23318917 -71953734 + Lx2 LINE L1 6357 6997 0 3 762 214 272 0 36 chr17 23318917 23318963 -71953688 + A-rich Low_complexity Low_complexity 36 81 0 3 762 201 147 0 0 chr17 23319017 23319051 -71953600 + (CAA)n Simple_repeat Simple_repeat 1 34 0 3 762 189 154 0 0 chr17 23319057 23319096 -71953555 + A-rich Low_complexity Low_complexity 1 39 0 3 762 522 0 0 0 chr17 23320410 23320468 -71952183 + (TAAAA)n Simple_repeat Simple_repeat 3 60 0 3 762 253 214 41 41 chr17 23320544 23320617 -71952034 + L1M2 LINE L1 4556 4628 -1515 3 762 202 379 42 0 chr17 23320710 23320805 -71951846 - MIRm SINE MIR -142 134 36 3 762 2004 145 97 6 chr17 23321744 23322105 -71950546 + ORR1B1 LTR MaLR 1 394 0 3 762 518 344 61 0 chr17 23322657 23322983 -71949668 - Tigger1 DNA MER2_type -341 2077 1732 3 762 249 173 49 12 chr17 23323043 23323125 -71949526 + T-rich Low_complexity Low_complexity 3 87 0 3 762 544 276 43 33 chr17 23323125 23323335 -71949316 - B3 SINE B2 -4 212 1 3 762 281 289 86 41 chr17 23324062 23324329 -71948322 + L1_Mur3 LINE L1 3811 4089 -1791 3 762 1318 331 35 10 chr17 23324562 23325163 -71947488 + Lx8 LINE L1 6476 7091 -382 3 762 29 0 0 0 chr17 23325298 23325327 -71947324 + AT_rich Low_complexity Low_complexity 1 29 0 3 762 391 300 76 67 chr17 23325504 23325714 -71946937 + L1M2 LINE L1 4425 4631 -1512 3 762 198 0 0 0 chr17 23325714 23325736 -71946915 + (GA)n Simple_repeat Simple_repeat 2 23 0 3 762 391 300 76 67 chr17 23325736 23325868 -71946783 + L1M2 LINE L1 4632 4769 -1374 3 762 22 35 0 0 chr17 23326255 23326284 -71946367 + AT_rich Low_complexity Low_complexity 1 29 0 3 762 278 289 16 8 chr17 23326430 23326552 -71946099 + L1M2 LINE L1 5488 5610 -693 3 762 226 152 0 33 chr17 23326795 23326856 -71945795 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 762 332 238 9 0 chr17 23326915 23327020 -71945631 + (TA)n Simple_repeat Simple_repeat 2 107 0 3 762 328 300 160 23 chr17 23327223 23327530 -71945121 + L1M4 LINE L1 2488 2836 -3310 3 762 279 286 102 12 chr17 23327602 23327768 -71944883 + L1M4 LINE L1 4570 4750 -1390 3 762 302 353 42 60 chr17 23327853 23328070 -71944581 + L1M2 LINE L1 4574 4786 -1357 3 762 278 296 45 58 chr17 23329114 23329268 -71943383 - RLTR14 LTR ERV1 -7 375 224 3 762 234 0 0 0 chr17 23330305 23330331 -71942320 + (T)n Simple_repeat Simple_repeat 1 26 0 3 762 1437 6 0 0 chr17 23330357 23330519 -71942132 + (TTTC)n Simple_repeat Simple_repeat 1 162 0 3 763 294 29 0 0 chr17 23330920 23330955 -71941696 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 763 246 32 0 0 chr17 23330960 23330991 -71941660 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 3 763 381 245 156 0 chr17 23331157 23331368 -71941283 + L1_Rod LINE L1 1203 1434 -4446 3 763 507 95 0 0 chr17 23331774 23331848 -71940803 + (GA)n Simple_repeat Simple_repeat 1 74 0 3 763 355 370 24 51 chr17 23332002 23332295 -71940356 - L1M2 LINE L1 -2493 3650 3366 3 763 503 297 34 0 chr17 23332446 23332621 -71940030 + L1MA4A LINE L1 5438 5618 -685 3 763 25 0 0 0 chr17 23332759 23332784 -71939867 + AT_rich Low_complexity Low_complexity 1 25 0 3 763 187 322 42 62 chr17 23332860 23332956 -71939695 - L4 LINE RTE -842 1187 1094 3 763 1301 68 6 0 chr17 23333021 23333198 -71939453 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 3 763 351 0 0 0 chr17 23333198 23333237 -71939414 + (GGAA)n Simple_repeat Simple_repeat 1 39 0 3 763 636 255 13 0 chr17 23333288 23333437 -71939214 - RLTR40 LTR ERVK -7 810 660 3 763 925 138 132 41 chr17 23333432 23333651 -71939000 + RLTR40 LTR ERVK 560 798 -19 3 763 392 218 0 10 chr17 23333704 23333806 -71938845 + Lx9 LINE L1 7521 7621 -23 4 763 207 0 0 0 chr17 23334053 23334076 -71938575 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 763 1118 37 7 0 chr17 23334076 23334212 -71938439 - B1_Mm SINE Alu -10 137 1 4 763 264 174 21 11 chr17 23334527 23334620 -71938031 + (TA)n Simple_repeat Simple_repeat 1 94 0 4 763 440 191 7 34 chr17 23334647 23334793 -71937858 + (TA)n Simple_repeat Simple_repeat 1 142 0 4 763 285 324 97 32 chr17 23334796 23334815 -71937836 - B3A SINE B2 0 198 2 4 763 553 346 6 24 chr17 23334815 23334981 -71937670 - RSINE1 SINE B4 0 165 3 4 763 227 281 29 19 chr17 23335613 23335718 -71936933 - L1_Mur3 LINE L1 -559 5321 5216 4 763 281 312 52 0 chr17 23335762 23335916 -71936735 + L1MA4A LINE L1 5769 5930 -373 3 763 6101 60 0 18 chr17 23336160 23336954 -71935697 - L1Md_F2 LINE L1 -12 6570 5791 4 763 244 0 0 0 chr17 23337146 23337175 -71935476 - L1Md_F2 LINE L1 -635 5947 5919 4 763 998 53 0 0 chr17 23337172 23337305 -71935346 + L1_Mm LINE L1 4416 4548 -1335 4 763 246 320 13 0 chr17 23337654 23337729 -71934922 + (CA)n Simple_repeat Simple_repeat 1 76 0 4 763 2126 78 162 12 chr17 23337848 23338187 -71934464 + RLTR10 LTR ERVK 1 390 0 4 763 509 354 56 60 chr17 23338198 23338483 -71934168 - B4A SINE B4 -8 284 1 4 763 252 0 0 0 chr17 23338583 23338611 -71934040 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 763 552 143 0 0 chr17 23338611 23338709 -71933942 + (GA)n Simple_repeat Simple_repeat 1 98 0 4 763 420 267 33 0 chr17 23338736 23338826 -71933825 - B3 SINE B2 -22 194 102 4 763 2187 136 143 28 chr17 23338828 23339260 -71933391 - RLTR45 LTR ERVK 0 482 1 4 763 9808 24 0 1 chr17 23339279 23341165 -71931486 - L1Md_A LINE L1 -2 6580 4696 4 763 7205 147 12 10 chr17 23341174 23342566 -71930085 - RLTR45-int LTR ERVK -456 7761 6331 4 763 2535 50 0 0 chr17 23342655 23342975 -71929676 - RLTR45-int LTR ERVK -5596 1648 1329 4 763 377 281 28 28 chr17 23343359 23343502 -71929149 - RNERVK23-int LTR ERVK -1880 6337 6195 4 763 2138 320 63 50 chr17 23343871 23346782 -71925869 - RNERVK23-int LTR ERVK -2469 5748 2376 4 763 655 126 0 8 chr17 23347232 23347352 -71925299 - RLTR45-int LTR ERVK -6213 1031 913 4 763 1607 72 36 0 chr17 23347475 23347698 -71924953 - RLTR45-int LTR ERVK -6333 911 681 4 763 990 56 7 40 chr17 23348035 23348184 -71924467 - RLTR45-int LTR ERVK -6552 692 549 4 763 3054 99 32 4 chr17 23348961 23349426 -71923225 - RLTR45-int LTR ERVK -6752 492 15 4 763 469 263 51 0 chr17 23349426 23349440 -71923211 - B3 SINE B2 -91 125 107 4 763 2757 125 37 41 chr17 23349440 23349924 -71922727 - RLTR45 LTR ERVK 0 482 1 4 763 469 263 51 0 chr17 23349924 23350027 -71922624 - B3 SINE B2 -110 106 3 4 763 222 276 36 84 chr17 23350158 23350241 -71922410 - ID4_ SINE ID 0 83 5 4 763 6036 56 3 1 chr17 23350571 23351340 -71921311 - RLTR13D1 LTR ERVK -36 770 1 4 763 579 205 126 0 chr17 23351767 23351894 -71920757 + B1_Mur2 SINE Alu 2 144 -5 4 763 780 254 30 10 chr17 23351901 23352104 -71920547 + B3 SINE B2 1 207 -9 4 763 593 330 0 0 chr17 23352131 23352322 -71920329 - Lx5 LINE L1 -608 6442 6252 4 763 1446 256 111 11 chr17 23352326 23352975 -71919676 + Lx6 LINE L1 6456 7426 -34 4 763 195 42 0 0 chr17 23352975 23352999 -71919652 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 4 763 358 305 0 0 chr17 23353186 23353268 -71919383 - ID4 SINE ID 0 83 2 4 763 6978 114 20 3 chr17 23353538 23355002 -71917649 - Lx LINE L1 -6 6648 5156 4 763 1773 213 9 211 chr17 23355003 23355765 -71916886 - RMER19C LTR ERVK -1 610 3 4 763 720 104 32 8 chr17 23355864 23355990 -71916661 + MMETn-int LTR ERVK 2202 2330 -2514 4 763 15087 112 26 2 chr17 23356010 23359024 -71913627 - Lx LINE L1 -2202 3681 596 4 763 325 277 34 8 chr17 23359024 23359197 -71913454 - L1M2 LINE L1 -780 5363 5156 4 763 257 75 25 0 chr17 23359242 23359282 -71913369 + (TCC)n Simple_repeat Simple_repeat 2 42 0 4 763 29 0 0 0 chr17 23360214 23360243 -71912408 + AT_rich Low_complexity Low_complexity 1 29 0 4 763 248 369 12 0 chr17 23361931 23362015 -71910636 + B1_Mur4 SINE Alu 9 93 -57 4 763 4971 89 35 24 chr17 23362210 23362973 -71909678 - RLTR22_Mus LTR ERVK -100 1708 937 4 763 7207 50 12 0 chr17 23362973 23363908 -71908743 - L1Md_F2 LINE L1 -23 6559 5614 4 763 513 186 0 136 chr17 23364291 23364453 -71908198 + MusHAL1 LINE L1 324 463 -2249 4 763 8429 194 46 4 chr17 23364503 23365796 -71906855 - MusHAL1 LINE L1 -525 2187 848 4 763 459 0 0 0 chr17 23365796 23365847 -71906804 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 763 8429 194 46 4 chr17 23365847 23366591 -71906060 - MusHAL1 LINE L1 -1865 847 65 4 763 367 162 0 0 chr17 23366600 23366680 -71905971 + L1_Mur1 LINE L1 1462 1541 -4345 4 763 5250 183 28 12 chr17 23366692 23368234 -71904417 - Lx4B LINE L1 -315 6743 5164 4 763 1011 305 48 24 chr17 23368277 23368656 -71903995 - RLTR11A2 LTR ERVK -6 521 134 4 763 3923 117 3 1 chr17 23368656 23369275 -71903376 - L1_Mus3 LINE L1 -253 6385 5765 4 763 23609 102 11 30 chr17 23369273 23372367 -71900284 - L1Md_F2 LINE L1 -11 6571 3460 4 763 408 40 0 0 chr17 23372367 23372417 -71900234 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 4 763 981 104 8 0 chr17 23372417 23372551 -71900100 - B1_Mus2 SINE Alu -12 135 1 4 763 23609 114 8 38 chr17 23372551 23372603 -71900048 - L1Md_F2 LINE L1 -2424 3459 3415 4 763 1127 81 0 0 chr17 23372603 23372751 -71899900 + B1_Mus1 SINE Alu 1 148 0 4 763 23609 114 8 38 chr17 23372751 23372783 -71899868 - L1_Mm LINE L1 -2469 3414 3414 4 763 324 0 0 0 chr17 23372783 23372819 -71899832 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 4 763 23609 114 8 38 chr17 23372819 23373890 -71898761 - L1Md_F2 LINE L1 -2469 3414 2399 4 763 3056 75 0 7 chr17 23373890 23374294 -71898357 - L1_Mus1 LINE L1 -4 6563 6163 4 763 23609 114 8 38 chr17 23374294 23374828 -71897823 - L1Md_F2 LINE L1 -3485 2398 1903 4 763 6098 102 8 7 chr17 23374828 23375718 -71896933 + L1_Mus3 LINE L1 5743 6633 -5 4 763 433 239 82 11 chr17 23376031 23376213 -71896438 + Lx7 LINE L1 5212 5406 -474 4 763 2540 300 65 78 chr17 23376224 23376885 -71895766 + Lx7 LINE L1 6066 6739 -957 4 763 279 0 0 0 chr17 23376885 23376916 -71895735 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 763 2540 300 65 78 chr17 23376916 23377905 -71894746 + Lx7 LINE L1 6740 7696 0 4 763 412 281 94 45 chr17 23377962 23378163 -71894488 - B3A SINE B2 0 216 6 4 763 2151 30 0 15 chr17 23379772 23380040 -71892611 + L1Md_F3 LINE L1 6320 6583 -1 4 763 21 36 0 0 chr17 23380472 23380500 -71892151 + AT_rich Low_complexity Low_complexity 1 28 0 4 763 198 0 0 0 chr17 23380511 23380533 -71892118 + (TTAA)n Simple_repeat Simple_repeat 2 23 0 4 763 387 325 71 32 chr17 23381009 23381205 -71891446 + B3 SINE B2 1 199 -17 4 763 240 391 17 42 chr17 23381252 23381372 -71891279 - RSINE1 SINE B4 -14 151 35 4 763 35002 34 19 7 chr17 23381967 23387485 -71885166 + L1Md_A LINE L1 1 5586 -297 4 763 8417 35 0 0 chr17 23387485 23388480 -71884171 + L1Md_A LINE L1 5587 6581 -1 4 763 472 290 30 0 chr17 23389754 23389885 -71882766 - B1_Mur1 SINE Alu 0 149 15 4 763 448 307 14 14 chr17 23390001 23390143 -71882508 - B1_Mur1 SINE Alu -1 148 7 4 763 202 125 41 20 chr17 23390507 23390556 -71882095 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 4 763 38524 17 5 6 chr17 23391220 23397611 -71875040 - L1Md_A LINE L1 0 6582 208 4 763 16301 134 134 3 chr17 23397825 23400102 -71872549 - L1_Mus1 LINE L1 -4 6563 3547 4 763 338 80 26 39 chr17 23400102 23400180 -71872471 + (CTATA)n Simple_repeat Simple_repeat 2 78 0 4 763 16301 171 149 2 chr17 23400180 23403075 -71869576 - L1_Mus1 LINE L1 -2340 3546 615 4 763 284 324 0 0 chr17 23403756 23403830 -71868821 + B3A SINE B2 5 78 -120 4 763 180 0 0 0 chr17 23404117 23404137 -71868514 + (T)n Simple_repeat Simple_repeat 1 20 0 4 763 1586 226 98 6 chr17 23405130 23405486 -71867165 + ORR1B1 LTR MaLR 1 389 -5 4 763 3042 273 59 19 chr17 23405500 23405608 -71867043 + ORR1B1-int LTR MaLR 9 117 -1392 4 763 2203 180 21 43 chr17 23405608 23406078 -71866573 + RMER6B LTR ERVK 1 460 -1 4 763 3042 266 47 40 chr17 23406078 23407182 -71865469 + ORR1B1-int LTR MaLR 118 1145 -364 4 763 426 296 0 0 chr17 23407193 23407308 -71865343 + ORR1B1 LTR MaLR 261 375 -19 4 763 6788 189 11 53 chr17 23407308 23408901 -71863750 + L1_Mm LINE L1 3844 5370 -513 4 763 3796 130 7 64 chr17 23408899 23409167 -71863484 + Lx LINE L1 5176 5446 -437 4 763 3672 32 0 2 chr17 23409167 23409599 -71863052 + L1Md_T LINE L1 6151 6581 -1 4 763 6746 130 6 10 chr17 23409599 23410837 -71861814 + Lx LINE L1 5447 6646 -8 4 763 410 75 15 0 chr17 23411095 23411162 -71861489 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 763 351 0 0 0 chr17 23411281 23411320 -71861331 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 763 699 84 0 0 chr17 23413207 23413302 -71859349 + BC1_Mm scRNA scRNA 1 95 -57 4 763 22 0 0 0 chr17 23415609 23415631 -71857020 + AT_rich Low_complexity Low_complexity 1 22 0 4 763 1098 83 0 43 chr17 23415907 23416095 -71856556 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 4 763 235 259 64 18 chr17 23416495 23416605 -71856046 - L1M2 LINE L1 -521 5776 5662 4 763 1706 244 63 6 chr17 23416671 23417336 -71855315 - L1_Mur3 LINE L1 -3081 2799 2097 4 763 27 49 0 0 chr17 23417336 23417377 -71855274 + AT_rich Low_complexity Low_complexity 1 41 0 4 763 372 144 8 0 chr17 23417384 23417450 -71855201 - B2_Mm2 SINE B2 -82 116 46 4 763 637 199 89 45 chr17 23417463 23417496 -71855155 - ORR1A3-int LTR MaLR 0 1509 1478 4 763 1383 62 17 0 chr17 23417496 23417674 -71854977 - B2_Mm2 SINE B2 -14 181 1 4 763 9334 136 62 50 chr17 23417674 23419103 -71853548 - ORR1A3-int LTR MaLR -63 1900 433 4 763 1088 98 0 0 chr17 23419103 23419246 -71853405 - B1_Mus2 SINE Alu -4 143 1 4 763 9334 136 62 50 chr17 23419246 23419612 -71853039 - ORR1A3-int LTR MaLR -1531 432 82 4 763 2748 80 21 3 chr17 23420197 23420571 -71852080 + L1Md_F2 LINE L1 6199 6579 -3 4 763 1265 199 12 35 chr17 23420572 23420910 -71851741 + RMER3D-int LTR ERVK 1052 1381 -1461 4 763 411 221 9 9 chr17 23421068 23421173 -71851478 + RMER3D-int LTR ERVK 1384 1488 -1354 4 763 501 236 40 13 chr17 23421202 23421352 -71851299 + MYSERV16_I-int LTR ERVK 641 794 -1532 4 763 1308 191 75 26 chr17 23421372 23421717 -71850934 + MYSERV16_I-int LTR ERVK 917 1278 -1048 4 763 557 180 130 11 chr17 23421724 23421909 -71850742 + MYSERV16_I-int LTR ERVK 2087 2293 -33 4 763 1430 78 15 15 chr17 23421917 23422112 -71850539 - B2_Mm2 SINE B2 0 195 1 4 763 478 244 10 100 chr17 23422112 23422306 -71850345 + RLTR16 LTR ERVK 11 182 -386 4 763 1705 102 22 6 chr17 23422306 23422590 -71850061 - MTB LTR MaLR 0 400 110 4 763 7163 108 36 4 chr17 23422590 23423687 -71848964 - MERVL-int LTR ERVL -1459 4026 2894 4 763 10418 90 5 11 chr17 23423690 23425915 -71846736 + L1Md_A LINE L1 446 2638 -3245 4 763 4185 86 14 137 chr17 23425915 23426721 -71845930 - RMER17A LTR ERVK -44 707 1 4 763 403 284 106 27 chr17 23426721 23426908 -71845743 + RLTR21 LTR ERVK 1105 1306 -266 4 763 527 258 0 29 chr17 23426965 23427101 -71845550 + RLTR21 LTR ERVK 1437 1568 -4 4 763 252 184 0 0 chr17 23427381 23427430 -71845221 + (CGTG)n Simple_repeat Simple_repeat 1 49 0 4 763 313 333 32 16 chr17 23427477 23427602 -71845049 - B3A SINE B2 -60 138 12 4 763 2302 196 24 13 chr17 23428927 23429393 -71843258 + RLTR31B_Mm LTR ERVK 1 471 -86 4 763 29 70 0 0 chr17 23429662 23429719 -71842932 + AT_rich Low_complexity Low_complexity 1 57 0 4 763 4779 65 24 2 chr17 23429721 23430349 -71842302 - L1_Mus1 LINE L1 -2 6565 5924 5 763 22 0 0 0 chr17 23431014 23431036 -71841615 + AT_rich Low_complexity Low_complexity 1 22 0 5 763 3129 123 33 2 chr17 23431036 23431517 -71841134 - L1_Mus4 LINE L1 -8 6628 6133 5 763 5085 77 4 10 chr17 23431536 23432243 -71840408 - Lx3_Mus LINE L1 -182 6827 6125 5 763 864 197 11 17 chr17 23432243 23432424 -71840227 + Lx3_Mus LINE L1 6828 7007 -2 5 763 5726 17 0 0 chr17 23432951 23433600 -71839051 + L1Md_A LINE L1 5934 6582 0 5 763 511 343 107 36 chr17 23434216 23434338 -71838313 + MTD LTR MaLR 1 123 -296 5 763 1273 99 6 0 chr17 23434338 23434520 -71838131 - B2_Mm1a SINE B2 -10 183 1 5 763 511 333 109 34 chr17 23434520 23434681 -71837970 + MTD LTR MaLR 124 304 -115 5 763 278 87 0 21 chr17 23435335 23435382 -71837269 + (GAAA)n Simple_repeat Simple_repeat 2 47 0 5 763 420 329 22 26 chr17 23435435 23435666 -71836985 - L1M2 LINE L1 -2191 3952 3723 5 763 23115 123 32 17 chr17 23435679 23440297 -71832354 + L1Md_F LINE L1 419 5117 -766 5 763 821 227 5 10 chr17 23440373 23440569 -71832082 - Lx2B LINE L1 -1 6999 6805 5 763 373 116 0 28 chr17 23440778 23440794 -71831857 - L1_Mus1 LINE L1 -15 6552 6538 5 763 404 37 0 18 chr17 23440794 23440849 -71831802 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 763 373 116 0 28 chr17 23440849 23440903 -71831748 - L1_Mus1 LINE L1 -30 6537 6484 5 763 5241 72 1 3 chr17 23440903 23441613 -71831038 + L1_Mus1 LINE L1 5761 6469 -98 5 763 497 278 141 14 chr17 23441609 23441886 -71830765 + RMER1C Other Other 1031 1342 0 5 763 2163 332 24 27 chr17 23442273 23443385 -71829266 + Lx5 LINE L1 5926 7034 -16 5 763 303 28 0 0 chr17 23443385 23443421 -71829230 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 5 763 492 18 0 0 chr17 23443749 23443806 -71828845 + (TA)n Simple_repeat Simple_repeat 1 57 0 5 763 415 363 34 14 chr17 23444245 23444452 -71828199 + B3 SINE B2 2 212 -4 5 763 282 316 13 13 chr17 23445483 23445634 -71827017 + (CA)n Simple_repeat Simple_repeat 2 152 0 5 763 591 53 0 0 chr17 23445801 23445876 -71826775 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 5 763 918 119 8 0 chr17 23445876 23446010 -71826641 - B1_Mus2 SINE Alu -10 137 3 5 763 209 229 33 0 chr17 23446157 23446218 -71826433 + (TCTCTG)n Simple_repeat Simple_repeat 2 64 0 5 763 247 295 0 9 chr17 23446193 23446306 -71826345 + (TA)n Simple_repeat Simple_repeat 1 112 0 5 763 417 20 0 0 chr17 23447855 23447905 -71824746 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 763 22 70 0 0 chr17 23449972 23450015 -71822636 + AT_rich Low_complexity Low_complexity 1 43 0 5 763 21 0 0 0 chr17 23450093 23450114 -71822537 + AT_rich Low_complexity Low_complexity 1 21 0 5 763 7715 90 3 6 chr17 23450148 23451320 -71821331 - L1_Mus1 LINE L1 -5 6995 5475 5 763 1212 61 0 0 chr17 23451325 23451472 -71821179 - B1_Mm SINE Alu 0 147 1 5 763 342 297 66 26 chr17 23451776 23452233 -71820418 + L1_Mur3 LINE L1 941 1403 -4474 5 763 36463 48 8 3 chr17 23452254 23457580 -71815071 + L1Md_A LINE L1 244 5586 -297 5 763 7619 40 48 1 chr17 23457580 23458529 -71814122 + L1Md_A LINE L1 5587 6580 -2 5 95 28447 67 17 3 chr17 23458564 23462391 -71810260 + L1_Mm LINE L1 1706 5586 -297 5 764 8983 4 0 0 chr17 23462391 23463387 -71809264 + L1Md_A LINE L1 5587 6582 0 5 764 8383 86 5 1 chr17 23463390 23464544 -71808107 + L1Md_F2 LINE L1 4427 5585 -298 5 764 7729 61 8 5 chr17 23464545 23465537 -71807114 + L1Md_F2 LINE L1 5587 6581 -1 5 764 602 214 7 6 chr17 23465537 23465724 -71806927 + L1_Mur3 LINE L1 1406 1588 -4289 5 764 3296 276 38 8 chr17 23465722 23466704 -71805947 + Lx5 LINE L1 6037 7047 -3 5 764 2458 286 48 50 chr17 23466725 23467089 -71805562 - Lx7 LINE L1 -6 7690 7351 5 764 189 0 0 0 chr17 23467089 23467110 -71805541 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 764 549 0 0 0 chr17 23467110 23467170 -71805481 + (GA)n Simple_repeat Simple_repeat 2 62 0 5 764 2458 286 48 50 chr17 23467170 23467952 -71804699 - Lx7 LINE L1 -346 7350 6547 5 764 3065 39 0 0 chr17 23467953 23468310 -71804341 - IAPEY2_LTR LTR ERVK 0 357 1 5 764 2911 170 24 75 chr17 23468310 23468939 -71803712 - MMERVK10C-int LTR ERVK 0 7581 6985 5 764 202 368 44 0 chr17 23468966 23469080 -71803571 - L3b LINE CR1 -29 453 335 5 764 3539 67 9 0 chr17 23469095 23469543 -71803108 - IAPEy-int LTR ERVK -4991 2689 2238 5 764 7801 170 7 46 chr17 23469520 23471042 -71801609 - IAPEy-int LTR ERVK -5501 2012 550 5 764 685 155 62 43 chr17 23471042 23471204 -71801447 - IAPLTR4_I LTR ERVK -1290 180 16 5 764 2708 39 63 0 chr17 23471204 23471536 -71801115 - IAPEY2_LTR LTR ERVK -4 353 1 5 764 4938 117 21 3 chr17 23471559 23472280 -71800371 + MERVL_2A-int LTR ERVL 2275 3008 -2753 5 764 26 30 0 0 chr17 23472282 23472315 -71800336 + AT_rich Low_complexity Low_complexity 1 33 0 5 764 34386 70 7 2 chr17 23472315 23476885 -71795766 - L1Md_F3 LINE L1 -17 6567 1968 5 764 318 26 0 0 chr17 23476885 23476924 -71795727 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 764 34386 65 6 0 chr17 23476924 23478294 -71794357 - L1Md_F3 LINE L1 -3916 1967 594 5 764 271 288 13 32 chr17 23478298 23478456 -71794195 + T-rich Low_complexity Low_complexity 2 156 0 5 764 7609 79 1 1 chr17 23478948 23480031 -71792620 + L1_Mus1 LINE L1 5485 6567 0 5 764 23 54 0 0 chr17 23480031 23480068 -71792583 + AT_rich Low_complexity Low_complexity 1 37 0 5 764 22 0 0 0 chr17 23480102 23480124 -71792527 + AT_rich Low_complexity Low_complexity 1 22 0 5 764 270 0 0 0 chr17 23482315 23482345 -71790306 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 764 180 163 0 0 chr17 23483970 23484013 -71788638 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 764 210 156 0 0 chr17 23484012 23484057 -71788594 + GA-rich Low_complexity Low_complexity 2 46 0 5 764 261 278 5 20 chr17 23484355 23484601 -71788050 + (TG)n Simple_repeat Simple_repeat 1 242 0 5 764 291 354 47 35 chr17 23485559 23485729 -71786922 - B3 SINE B2 -4 212 41 5 764 498 17 0 0 chr17 23486197 23486256 -71786395 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 764 519 17 0 0 chr17 23486532 23486592 -71786059 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 764 447 19 0 0 chr17 23486592 23486643 -71786008 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 764 261 0 0 0 chr17 23487124 23487153 -71785498 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 5 764 2512 322 28 33 chr17 23487154 23488270 -71784381 - Lx5 LINE L1 -15 7035 5926 5 764 583 291 127 11 chr17 23488660 23488935 -71783716 - RMER1C Other Other -5 1337 1031 5 764 5499 79 0 1 chr17 23488931 23489641 -71783010 - L1_Mus1 LINE L1 -98 6469 5761 5 764 433 133 0 0 chr17 23489641 23489716 -71782935 + L1_Mus1 LINE L1 6484 6558 -9 5 764 189 107 0 0 chr17 23489720 23489748 -71782903 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 5 764 25 0 0 0 chr17 23489754 23489779 -71782872 + AT_rich Low_complexity Low_complexity 1 25 0 5 764 291 376 20 0 chr17 23489803 23489952 -71782699 - RMER1B Other Other -752 314 163 5 764 800 256 0 5 chr17 23490001 23490197 -71782454 + Lx2B LINE L1 6805 6999 -1 5 764 8615 107 15 2 chr17 23490271 23491569 -71781082 - L1_Mm LINE L1 -766 5117 3803 5 764 727 132 0 0 chr17 23491570 23491684 -71780967 - ETnERV2-int LTR ERVK -3727 3679 3566 5 764 6839 52 1 8 chr17 23491694 23492561 -71780090 - L1Md_F2 LINE L1 0 6582 5722 5 764 509 355 99 28 chr17 23493200 23493361 -71779290 - MTD LTR MaLR -115 304 124 5 764 1107 143 28 0 chr17 23493361 23493543 -71779108 + B2_Mm2 SINE B2 1 187 -8 5 764 509 355 99 28 chr17 23493543 23493665 -71778986 - MTD LTR MaLR -296 123 1 5 764 4514 75 44 2 chr17 23494659 23495275 -71777376 + L1_Mus1 LINE L1 5924 6565 -2 5 764 32 43 0 0 chr17 23495288 23495334 -71777317 + AT_rich Low_complexity Low_complexity 1 46 0 5 764 2379 184 30 4 chr17 23495610 23496069 -71776582 - RLTR31B_Mm LTR ERVK -86 471 1 5 764 300 311 24 24 chr17 23497393 23497518 -71775133 + B3 SINE B2 12 136 -80 5 764 393 39 0 0 chr17 23497555 23497606 -71775045 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 764 419 295 98 106 chr17 23497895 23498141 -71774510 - RLTR21 LTR ERVK -4 1568 1157 5 764 189 121 0 0 chr17 23498176 23498209 -71774442 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 5 764 967 241 92 88 chr17 23498307 23498946 -71773705 - RLTR21 LTR ERVK -266 1306 737 5 764 457 277 122 37 chr17 23498972 23499186 -71773465 - Lx2B LINE L1 -13 6987 6756 5 764 1282 213 16 8 chr17 23499186 23499442 -71773209 - RLTR21 LTR ERVK -1314 258 1 5 764 1014 229 8 60 chr17 23499647 23499957 -71772694 + L1VL4 LINE L1 164 662 -5640 5 764 351 0 0 0 chr17 23499961 23500000 -71772651 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 764 225 0 0 0 chr17 23500004 23500029 -71772622 + (A)n Simple_repeat Simple_repeat 1 25 0 1 764 731 177 0 0 chr17 23500029 23500176 -71772475 + L1VL4 LINE L1 674 820 -5482 2 764 31195 91 5 12 chr17 23500181 23505370 -71767281 + L1Md_F3 LINE L1 446 5584 -299 3 764 8054 45 5 1 chr17 23505372 23506366 -71766285 + L1Md_F3 LINE L1 5587 6584 0 3 764 5154 64 4 4 chr17 23506384 23507060 -71765591 + L1_Mm LINE L1 5123 5798 -85 4 764 5251 54 1 0 chr17 23507051 23507697 -71764954 - L1Md_F2 LINE L1 -208 6374 5728 5 764 1322 51 11 0 chr17 23507698 23507874 -71764777 + L1Md_A LINE L1 6405 6582 0 6 764 5594 86 3 6 chr17 23507993 23508770 -71763881 + L1Md_F2 LINE L1 5772 6542 -40 7 764 388 35 17 17 chr17 23508770 23508829 -71763822 + (TAAA)n Simple_repeat Simple_repeat 1 59 0 8 764 540 0 0 0 chr17 23509055 23509115 -71763536 + (TC)n Simple_repeat Simple_repeat 1 60 0 9 764 1146 335 83 4 chr17 23509115 23509364 -71763287 + L1_Mur3 LINE L1 240 508 -7220 1 764 203 0 37 0 chr17 23509364 23509391 -71763260 + (CAAAA)n Simple_repeat Simple_repeat 5 32 0 1 764 1146 335 83 4 chr17 23509391 23509686 -71762965 + L1_Mur3 LINE L1 509 826 -6902 1 764 1439 271 57 21 chr17 23510191 23510802 -71761849 + L1_Mur3 LINE L1 2075 2707 -3173 1 764 257 229 57 0 chr17 23510827 23510932 -71761719 + L1_Mur3 LINE L1 3038 3148 -2732 1 764 1647 11 16 0 chr17 23511010 23511199 -71761452 + B2_Mm1a SINE B2 2 193 0 1 764 564 216 47 12 chr17 23511222 23511391 -71761260 + L1_Mur3 LINE L1 2799 2973 -2907 1 764 494 297 22 0 chr17 23511399 23511537 -71761114 + B1_Mur3 SINE Alu 9 149 0 1 764 320 248 31 25 chr17 23511561 23511722 -71760929 + L1_Mur3 LINE L1 2988 3149 -2731 1 764 4376 132 7 10 chr17 23511726 23512671 -71759980 + L1Md_F3 LINE L1 425 1336 -5324 1 764 2308 112 106 57 chr17 23512672 23513125 -71759526 + IAPLTR2_Mm LTR ERVK 1 475 0 1 764 1534 49 0 0 chr17 23513129 23513327 -71759324 - RLTR10-int LTR ERVK -1415 572 302 1 764 2690 52 62 11 chr17 23513327 23513698 -71758953 - RLTR10 LTR ERVK 0 390 1 1 764 32943 55 1 4 chr17 23513698 23514878 -71757773 + L1Md_F3 LINE L1 1332 2511 -3375 1 764 3744 66 0 4 chr17 23514878 23515365 -71757286 + L1Md_F2 LINE L1 6098 6582 0 1 764 32943 55 1 4 chr17 23515365 23518453 -71754198 + L1Md_F3 LINE L1 2512 5589 -297 1 764 8116 43 5 1 chr17 23518453 23519447 -71753204 + L1Md_F3 LINE L1 5590 6587 0 1 764 1328 274 35 28 chr17 23519498 23520102 -71752549 + L1_Mur3 LINE L1 3210 3817 -2063 1 764 483 33 0 0 chr17 23523197 23523258 -71749393 + (TC)n Simple_repeat Simple_repeat 2 62 0 1 764 510 17 0 0 chr17 23523258 23523316 -71749335 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 764 200 257 0 28 chr17 23524892 23524964 -71747687 + (TA)n Simple_repeat Simple_repeat 1 70 0 2 764 243 239 28 0 chr17 23524930 23525001 -71747650 + (TAGA)n Simple_repeat Simple_repeat 1 73 0 2 764 376 298 11 17 chr17 23525289 23525470 -71747181 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 764 1176 48 7 0 chr17 23526450 23526596 -71746055 + B1_Mus2 SINE Alu 1 147 0 2 764 270 341 63 26 chr17 23526666 23526856 -71745795 - B3 SINE B2 -18 198 2 2 764 560 53 0 13 chr17 23527286 23527363 -71745288 + (TA)n Simple_repeat Simple_repeat 1 76 0 2 764 225 0 0 0 chr17 23528125 23528150 -71744501 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 2 764 2465 327 30 38 chr17 23528152 23528454 -71744197 - Lx5 LINE L1 -16 7034 6743 2 764 966 92 0 7 chr17 23528454 23528596 -71744055 + L1_Mus1 LINE L1 6427 6567 0 2 764 2465 327 30 38 chr17 23528596 23529410 -71743241 - Lx5 LINE L1 -308 6742 5927 2 764 1320 295 65 41 chr17 23529810 23530424 -71742227 - RMER1C Other Other -5 1337 709 3 764 554 363 53 43 chr17 23530603 23531081 -71741570 - RMER1C Other Other -493 849 163 3 764 594 259 37 5 chr17 23531131 23531321 -71741330 + Lx2B LINE L1 6805 7000 0 3 764 283 320 32 11 chr17 23531479 23531706 -71740945 + L1M2 LINE L1 3712 3946 -2200 3 764 316 292 34 0 chr17 23532726 23532815 -71739836 - MTD LTR MaLR -115 304 213 3 764 8056 26 11 0 chr17 23532822 23533983 -71738668 - L1Md_T LINE L1 0 6582 5403 3 764 326 364 34 17 chr17 23533995 23534174 -71738477 - MTD LTR MaLR -237 182 1 3 764 1167 68 0 0 chr17 23534356 23534502 -71738149 + B1_Mus1 SINE Alu 1 146 -2 3 764 24 32 0 0 chr17 23535184 23535215 -71737436 + AT_rich Low_complexity Low_complexity 1 31 0 3 764 643 185 19 19 chr17 23535486 23535640 -71737011 - Lx3A LINE L1 -8 6973 6820 3 764 4832 102 14 0 chr17 23535647 23536344 -71736307 + Lx3_Mus LINE L1 6122 6828 -181 3 764 25 31 0 0 chr17 23537032 23537064 -71735587 + AT_rich Low_complexity Low_complexity 1 32 0 4 764 2636 156 17 11 chr17 23537344 23537811 -71734840 - RLTR31B_Mm LTR ERVK -87 470 1 4 764 6187 84 5 2 chr17 23539191 23540036 -71732615 + L1_Mus1 LINE L1 5721 6567 0 4 764 22 35 0 0 chr17 23540084 23540113 -71732538 + AT_rich Low_complexity Low_complexity 1 29 0 4 764 999 271 107 94 chr17 23540359 23540975 -71731676 - RLTR21 LTR ERVK -4 1568 1056 4 764 560 53 13 0 chr17 23540975 23541051 -71731600 + (CATA)n Simple_repeat Simple_repeat 3 79 0 4 764 999 234 182 65 chr17 23541051 23541418 -71731233 - RLTR21 LTR ERVK -404 1168 731 4 764 4676 251 44 16 chr17 23541419 23542657 -71729994 - Lx2B LINE L1 -1 6999 5727 4 764 11833 192 30 13 chr17 23542656 23545210 -71727441 + L1_Mur2 LINE L1 2739 5335 -542 4 764 514 185 9 0 chr17 23545213 23545321 -71727330 + Lx LINE L1 6534 6642 -12 4 764 289 172 0 54 chr17 23545456 23545548 -71727103 + Lx2B LINE L1 6913 6999 -1 4 764 384 303 195 13 chr17 23545920 23546074 -71726577 + B3 SINE B2 11 192 -24 5 764 26 30 0 0 chr17 23546119 23546152 -71726499 + AT_rich Low_complexity Low_complexity 1 33 0 5 764 6678 131 17 7 chr17 23546286 23547377 -71725274 - Lx3_Mus LINE L1 0 7009 5908 5 764 195 129 0 0 chr17 23547382 23547413 -71725238 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 5 764 11699 92 25 8 chr17 23547451 23549162 -71723489 - L1_Mur1 LINE L1 -3 5883 4144 5 764 1975 138 10 16 chr17 23549166 23549476 -71723175 - RLTR10E LTR ERVK -3 308 1 5 764 20818 78 4 5 chr17 23549476 23552509 -71720142 - MMERVK10C-int LTR ERVK 0 7680 4623 5 764 787 102 39 8 chr17 23553148 23553276 -71719375 - MMERVK10C-int LTR ERVK -2920 4661 4530 5 764 477 195 10 32 chr17 23553287 23553414 -71719237 - MMERVK10C-int LTR ERVK -2380 2464 2356 5 764 3842 131 99 3 chr17 23553414 23554057 -71718594 - ETnERV2-int LTR ERVK -3135 4271 3567 5 764 674 193 0 0 chr17 23554083 23554202 -71718449 - ETnERV2-int LTR ERVK -4653 2753 2635 5 764 259 291 0 55 chr17 23554215 23554306 -71718345 - ETnERV2-int LTR ERVK -4867 2539 2454 5 764 504 202 92 0 chr17 23554323 23554432 -71718219 - RMER16-int LTR ERVK -5081 1056 938 5 764 1536 170 135 22 chr17 23554435 23554875 -71717776 - RMER16-int LTR ERVK -5469 668 192 5 764 3012 186 75 80 chr17 23554850 23555726 -71716925 - MMERVK10C-int LTR ERVK -6709 872 1 5 764 1919 139 16 3 chr17 23555730 23556034 -71716617 - RLTR10E LTR ERVK -3 308 1 5 764 16091 104 16 6 chr17 23556034 23557446 -71715205 - L1_Mur1 LINE L1 -1737 4149 2712 5 764 252 0 0 0 chr17 23557446 23557474 -71715177 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 764 16091 104 16 6 chr17 23557474 23557881 -71714770 - L1_Mur1 LINE L1 -3175 2711 2305 5 764 7055 37 7 0 chr17 23557881 23558725 -71713926 + L1Md_T LINE L1 5732 6581 -1 6 764 16091 104 16 6 chr17 23558725 23559549 -71713102 - L1_Mur1 LINE L1 -3582 2304 1481 5 764 423 38 0 0 chr17 23559549 23559602 -71713049 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 764 311 301 6 33 chr17 23559645 23559827 -71712824 + (TATG)n Simple_repeat Simple_repeat 4 180 0 6 764 288 0 0 0 chr17 23561178 23561222 -71711429 - L1Md_T LINE L1 0 6582 6539 6 764 4938 70 0 0 chr17 23561229 23561861 -71710790 - L1Md_T LINE L1 0 6582 5951 6 764 1815 331 74 20 chr17 23561878 23562731 -71709920 - Lx5 LINE L1 -5 7045 6147 6 764 4127 62 9 0 chr17 23562738 23563286 -71709365 + L1Md_F2 LINE L1 5709 6261 -321 6 764 460 127 0 0 chr17 23563288 23563351 -71709300 - RLTR27 LTR ERVK 0 309 247 6 764 34327 68 2 14 chr17 23563354 23569654 -71702997 - L1Md_F2 LINE L1 -10 6572 348 6 764 189 0 0 0 chr17 23570023 23570044 -71702607 + (T)n Simple_repeat Simple_repeat 1 21 0 7 764 1215 34 7 0 chr17 23570044 23570190 -71702461 - B1_Mm SINE Alu 0 147 1 7 764 417 132 32 3 chr17 23570976 23571086 -71701565 - L1VL4 LINE L1 -2254 1660 1546 7 764 1026 86 0 44 chr17 23571104 23571263 -71701388 - L1_Mus1 LINE L1 0 6567 6416 7 764 4382 65 0 2 chr17 23571263 23571895 -71700756 - L1_Mus1 LINE L1 -395 6172 5542 7 764 2759 148 1 16 chr17 23571892 23572737 -71699914 - L1VL4 LINE L1 -2331 1583 756 7 764 24 32 0 0 chr17 23572805 23572836 -71699815 + AT_rich Low_complexity Low_complexity 1 31 0 7 764 3563 202 31 4 chr17 23572975 23573692 -71698959 + RLTR21 LTR ERVK 1 736 -836 7 764 5377 232 24 15 chr17 23573692 23575225 -71697426 + Lx2B LINE L1 5455 6999 -1 7 764 1045 209 165 38 chr17 23575235 23575735 -71696916 + RLTR21 LTR ERVK 737 1300 -272 7 764 801 264 65 109 chr17 23575741 23575895 -71696756 + RLTR21 LTR ERVK 1056 1226 -346 7 764 4313 96 14 154 chr17 23575895 23576769 -71695882 - RMER17A LTR ERVK 0 751 1 7 764 801 264 65 109 chr17 23576769 23577155 -71695496 + RLTR21 LTR ERVK 1227 1572 0 7 764 573 52 0 0 chr17 23577439 23577516 -71695135 + (TG)n Simple_repeat Simple_repeat 2 78 0 7 764 313 333 32 16 chr17 23577554 23577679 -71694972 - B3A SINE B2 -60 138 12 8 764 2472 177 30 4 chr17 23579003 23579462 -71693189 + RLTR31B_Mm LTR ERVK 1 471 -86 8 764 29 94 0 0 chr17 23579748 23579833 -71692818 + AT_rich Low_complexity Low_complexity 1 85 0 8 764 6165 46 16 0 chr17 23579835 23580601 -71692050 - L1Md_F3 LINE L1 -2 6582 5805 8 764 4724 84 6 2 chr17 23580601 23581233 -71691418 - L1_Mus1 LINE L1 -8 6559 5925 8 764 1439 97 14 0 chr17 23581302 23581509 -71691142 - Lx3_Mus LINE L1 -277 6732 6523 8 764 246 62 0 0 chr17 23581512 23581544 -71691107 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 8 764 855 28 9 0 chr17 23581545 23581654 -71690997 - B1_Mm SINE Alu 0 147 38 8 764 2918 72 0 5 chr17 23581661 23582066 -71690585 - Lx3_Mus LINE L1 -482 6527 6125 8 764 865 176 22 28 chr17 23582066 23582247 -71690404 + Lx3_Mus LINE L1 6828 7007 -2 8 764 496 344 103 32 chr17 23583429 23583506 -71689145 + MTD LTR MaLR 48 123 -296 8 764 1331 93 16 0 chr17 23583506 23583689 -71688962 - B2_Mm2 SINE B2 -9 186 1 9 764 496 344 103 32 chr17 23583689 23583863 -71688788 + MTD LTR MaLR 124 317 -102 8 764 318 132 0 0 chr17 23584496 23584549 -71688102 + (GAAA)n Simple_repeat Simple_repeat 3 55 0 9 764 432 324 22 26 chr17 23584602 23584833 -71687818 - L1M2 LINE L1 -2191 3952 3723 9 764 2180 189 7 2 chr17 23584872 23585318 -71687333 + L1Md_F LINE L1 578 1025 -5494 9 764 36056 41 1 3 chr17 23585318 23591249 -71681402 + L1Md_T LINE L1 242 6252 -333 9 764 516 101 37 0 chr17 23591249 23591358 -71681293 + Lx3_Mus LINE L1 6897 7009 0 9 764 371 106 15 0 chr17 23591488 23591554 -71681097 + (TA)n Simple_repeat Simple_repeat 2 68 0 9 764 219 114 0 0 chr17 23591557 23591592 -71681059 + (TG)n Simple_repeat Simple_repeat 1 35 0 9 764 357 323 207 0 chr17 23591606 23591770 -71680881 - B3 SINE B2 -8 208 11 9 764 254 166 0 56 chr17 23592144 23592235 -71680416 - Lx LINE L1 -4 6996 6913 9 764 512 185 9 0 chr17 23592370 23592478 -71680173 - Lx LINE L1 -12 6642 6534 9 95 11567 192 22 1 chr17 23592481 23595024 -71677627 - L1_Mur2 LINE L1 -542 5335 2739 1 765 3032 241 40 18 chr17 23595023 23595858 -71676793 + Lx2B LINE L1 5727 6579 -421 1 765 2878 93 12 0 chr17 23595852 23596281 -71676370 - L1_Mus1 LINE L1 -413 6154 5721 1 765 2564 166 28 7 chr17 23597667 23598128 -71674523 + RLTR31B_Mm LTR ERVK 1 471 -86 1 765 21 57 0 0 chr17 23598408 23598443 -71674208 + AT_rich Low_complexity Low_complexity 1 35 0 1 765 4360 90 30 3 chr17 23598456 23599080 -71673571 - L1_Mus1 LINE L1 -2 6565 5925 1 765 3349 75 8 208 chr17 23599149 23599389 -71673262 - Lx3_Mus LINE L1 -277 6732 6509 1 765 835 73 0 0 chr17 23599389 23599499 -71673152 - B1_Mus2 SINE Alu 0 147 38 1 765 3349 75 8 208 chr17 23599499 23599909 -71672742 - Lx3_Mus LINE L1 -277 6508 6125 1 765 757 212 23 12 chr17 23599909 23600081 -71672570 + Lx3_Mus LINE L1 6828 7001 -8 1 765 31961 109 15 31 chr17 23600082 23601350 -71671301 + L1Md_F2 LINE L1 208 1452 -4431 1 765 7117 51 1 0 chr17 23601350 23602226 -71670425 + L1Md_F2 LINE L1 5694 6570 -12 1 765 31961 59 1 4 chr17 23602226 23606372 -71666279 + L1Md_F2 LINE L1 1453 5586 -297 1 765 7959 52 4 0 chr17 23606372 23607363 -71665288 + L1Md_F2 LINE L1 5587 6581 -1 1 765 27 0 0 0 chr17 23607364 23607391 -71665260 + AT_rich Low_complexity Low_complexity 1 27 0 1 765 516 335 172 29 chr17 23608570 23608647 -71664004 + MTD LTR MaLR 48 123 -296 1 765 1318 93 6 0 chr17 23608647 23608830 -71663821 - B2_Mm1t SINE B2 -9 184 1 1 765 516 335 172 29 chr17 23608830 23609060 -71663591 + MTD LTR MaLR 124 399 -20 1 765 329 93 0 18 chr17 23609637 23609692 -71662959 + (GAAA)n Simple_repeat Simple_repeat 2 55 0 1 765 432 324 22 26 chr17 23609745 23609976 -71662675 - L1M2 LINE L1 -2191 3952 3723 1 765 2252 183 7 0 chr17 23610015 23610462 -71662189 + L1Md_F LINE L1 578 1027 -5492 1 765 2518 47 0 0 chr17 23610457 23610776 -71661875 + L1Md_F2 LINE L1 5268 5586 -297 1 765 8818 40 2 0 chr17 23610776 23611770 -71660881 + L1Md_F2 LINE L1 5587 6582 0 1 765 373 287 6 23 chr17 23612800 23612971 -71659680 + (CA)n Simple_repeat Simple_repeat 1 168 0 1 765 396 0 0 0 chr17 23613135 23613179 -71659472 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 1 765 948 149 0 0 chr17 23613179 23613313 -71659338 - B1_Mus2 SINE Alu -12 135 2 1 765 209 229 33 0 chr17 23613458 23613519 -71659132 + (TCTCTG)n Simple_repeat Simple_repeat 2 64 0 1 765 256 295 0 9 chr17 23613494 23613607 -71659044 + (TA)n Simple_repeat Simple_repeat 1 112 0 1 765 237 33 0 0 chr17 23615160 23615190 -71657461 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 765 26 0 0 0 chr17 23617378 23617404 -71655247 + AT_rich Low_complexity Low_complexity 1 26 0 1 765 9605 158 15 26 chr17 23617651 23617859 -71654792 - L1_Mur1 LINE L1 -1585 4301 4098 1 765 3691 28 0 0 chr17 23617859 23618255 -71654396 + MTA_Mm LTR MaLR 1 396 0 1 765 9605 158 15 26 chr17 23618255 23619985 -71652666 - L1_Mur1 LINE L1 -1789 4097 2384 1 765 357 174 13 0 chr17 23620049 23620131 -71652520 - L1_Mur1 LINE L1 -6175 809 686 1 765 482 303 89 28 chr17 23620196 23620360 -71652291 + B3 SINE B2 5 183 -33 1 765 245 89 22 0 chr17 23620360 23620405 -71652246 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 765 482 303 89 28 chr17 23620405 23620420 -71652231 + B3 SINE B2 184 195 -21 1 765 437 167 0 43 chr17 23621371 23621465 -71651186 + L1Md_F LINE L1 7 96 -6423 1 765 4365 60 6 0 chr17 23621465 23621982 -71650669 + L1Md_F2 LINE L1 6063 6582 0 1 765 241 307 53 0 chr17 23622223 23622298 -71650353 - B2_Mm2 SINE B2 -106 89 11 1 765 559 212 24 2 chr17 23623052 23623208 -71649443 - L1_Mur1 LINE L1 -1861 4279 4116 1 765 11680 142 42 14 chr17 23623196 23624867 -71647784 + L1_Mur1 LINE L1 529 2219 -3667 1 765 6327 54 3 3 chr17 23624867 23625615 -71647036 + L1Md_F2 LINE L1 5835 6582 0 1 765 11680 140 49 18 chr17 23625615 23626765 -71645886 + L1_Mur1 LINE L1 2220 3423 -2463 1 765 813 87 0 0 chr17 23626765 23626880 -71645771 + (TTTC)n Simple_repeat Simple_repeat 3 117 0 1 765 2654 144 222 23 chr17 23626949 23627525 -71645126 - L1_Mur3 LINE L1 -120 5760 5070 1 765 420 141 43 0 chr17 23627529 23627621 -71645030 + GA-rich Low_complexity Low_complexity 1 96 0 1 765 1995 182 45 43 chr17 23627627 23628070 -71644581 + L1_Mur3 LINE L1 4641 5084 -796 1 765 468 66 0 84 chr17 23628063 23628146 -71644505 + Lx3A LINE L1 3415 3490 -2396 1 765 264 133 0 0 chr17 23628246 23628291 -71644360 + MT2A LTR ERVL 489 533 0 1 765 31 26 0 0 chr17 23628543 23628581 -71644070 + AT_rich Low_complexity Low_complexity 1 38 0 1 765 9050 135 13 5 chr17 23629301 23631690 -71640961 + Lx3A LINE L1 4457 6858 -123 1 765 1455 79 0 21 chr17 23631690 23631883 -71640768 - L1_Mus1 LINE L1 -10 6557 6369 1 765 2080 137 26 6 chr17 23631884 23631948 -71640703 - L1_Mm LINE L1 -576 5307 5245 1 765 315 104 0 0 chr17 23631948 23631996 -71640655 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 765 2080 137 26 6 chr17 23631996 23632276 -71640375 - L1_Mm LINE L1 -639 5244 4957 1 765 3151 21 0 0 chr17 23632277 23632614 -71640037 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 765 56713 20 15 6 chr17 23632614 23639029 -71633622 - IAPEz-int LTR ERVK 0 6481 8 1 765 3141 24 0 0 chr17 23639029 23639366 -71633285 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 765 5031 125 6 8 chr17 23639367 23639420 -71633231 - L1_Mm LINE L1 -924 4959 4907 1 765 5460 62 10 15 chr17 23639420 23640097 -71632554 + L1Md_F2 LINE L1 5909 6582 0 1 765 5031 125 6 8 chr17 23640097 23640835 -71631816 - L1_Mm LINE L1 -977 4906 4169 1 765 4666 57 2 2 chr17 23640836 23641385 -71631266 - L1Md_F2 LINE L1 -5 6577 6029 1 765 4665 10 12 0 chr17 23641385 23641872 -71630779 + MT2_Mm LTR ERVL 1 493 0 1 765 48191 15 8 0 chr17 23641872 23647192 -71625459 + MERVL-int LTR ERVL 1 5360 -125 1 765 348 191 46 35 chr17 23647192 23647279 -71625372 + ORR1A3-int LTR MaLR 553 640 -1323 1 765 269 0 27 0 chr17 23647279 23647316 -71625335 + MERVL-int LTR ERVL 5448 5485 0 1 765 4598 16 12 0 chr17 23647316 23647803 -71624848 + MT2_Mm LTR ERVL 1 493 0 1 765 3596 46 5 0 chr17 23647803 23648238 -71624413 - L1Md_F2 LINE L1 -549 6033 5597 1 765 1006 152 27 20 chr17 23648249 23648456 -71624195 + B2_Mm2 SINE B2 5 213 -3 1 765 236 270 16 0 chr17 23648944 23649007 -71623644 - B2_Mm2 SINE B2 -108 87 24 1 765 196 137 19 19 chr17 23649135 23649187 -71623464 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 765 442 345 21 42 chr17 23649195 23649397 -71623254 - B3A SINE B2 -13 203 11 1 765 254 347 0 0 chr17 23649669 23649741 -71622910 + B3 SINE B2 25 96 -120 1 765 303 179 0 45 chr17 23649773 23649861 -71622790 - Lx2B LINE L1 -4 6996 6913 1 765 8000 148 36 5 chr17 23649992 23652004 -71620647 - Lx2 LINE L1 0 6997 4920 1 765 180 238 0 0 chr17 23652977 23653019 -71619632 - L3 LINE CR1 -896 3593 3552 1 765 23 0 0 0 chr17 23653374 23653397 -71619254 + AT_rich Low_complexity Low_complexity 1 23 0 1 765 613 333 32 75 chr17 23653524 23653832 -71618819 - Lx5 LINE L1 0 7050 6756 1 765 6846 129 10 0 chr17 23653836 23654877 -71617774 - L1_Mm LINE L1 -122 5761 4711 1 765 21 36 0 0 chr17 23655155 23655183 -71617468 + AT_rich Low_complexity Low_complexity 1 28 0 1 765 1438 353 54 28 chr17 23655273 23656368 -71616283 - RMER1C Other Other 0 1342 362 1 765 957 223 5 0 chr17 23656410 23656603 -71616048 + Lx2B LINE L1 6804 6997 -3 1 765 230 242 115 10 chr17 23656826 23656922 -71615729 + L1M2 LINE L1 3809 3914 -2229 1 765 3087 145 12 54 chr17 23657050 23658238 -71614413 + L1Md_F LINE L1 513 1664 -4219 1 765 853 201 108 145 chr17 23658238 23658646 -71614005 + RLTR9C LTR ERVK 1 393 0 1 765 11805 100 20 8 chr17 23658647 23660286 -71612365 + ETnERV2-int LTR ERVK 2 1660 -1654 1 765 20329 184 32 23 chr17 23660518 23664981 -71607670 + ETnERV2-int LTR ERVK 1791 7077 -329 1 765 328 82 0 39 chr17 23664976 23665027 -71607624 + ETnERV-int LTR ERVK 2969 3017 -297 1 765 575 236 81 5 chr17 23665027 23665198 -71607453 + RLTR13B1 LTR ERVK 118 300 -593 1 765 239 214 127 14 chr17 23665222 23665293 -71607358 + RLTR13B1 LTR ERVK 459 537 -365 1 765 405 125 69 0 chr17 23665293 23665365 -71607286 + ETnERV2-int LTR ERVK 7329 7405 -1 1 765 805 192 151 144 chr17 23665366 23665756 -71606895 + RLTR9C LTR ERVK 1 393 0 1 765 1457 96 0 0 chr17 23665756 23665964 -71606687 + L1_Mm LINE L1 1659 1866 -4017 1 765 8510 36 4 1 chr17 23666047 23667731 -71604920 - L1Md_F3 LINE L1 0 6584 4895 1 765 30 0 0 0 chr17 23667853 23667883 -71604768 + AT_rich Low_complexity Low_complexity 1 30 0 1 765 181 106 61 41 chr17 23667987 23668036 -71604615 + CT-rich Low_complexity Low_complexity 1 50 0 1 765 318 331 115 0 chr17 23668036 23668175 -71604476 - HAL1-3A_ME LINE L1 -420 2438 2284 1 765 265 220 0 35 chr17 23668184 23668269 -71604382 + C-rich Low_complexity Low_complexity 1 82 0 1 765 747 112 5 68 chr17 23668287 23668478 -71604173 + CT-rich Low_complexity Low_complexity 1 179 0 1 765 315 0 0 0 chr17 23668582 23668617 -71604034 + (A)n Simple_repeat Simple_repeat 1 35 0 1 765 370 207 230 18 chr17 23668933 23669046 -71603605 - B1_Mm SINE Alu -1 146 10 1 765 275 71 24 0 chr17 23669126 23669168 -71603483 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 1 765 624 36 0 0 chr17 23669171 23669255 -71603396 - B2_Mm1t SINE B2 -1 192 109 1 765 766 204 199 0 chr17 23669346 23669522 -71603129 + B3 SINE B2 1 211 -5 1 765 672 0 0 0 chr17 23670928 23671001 -71601650 + tRNA-Lys-AAG tRNA tRNA 1 73 -3 1 765 247 189 0 54 chr17 23671340 23671396 -71601255 + tRNA-Pro-CCY tRNA tRNA 1 53 -22 1 765 509 255 197 21 chr17 23671535 23671723 -71600928 - ID_B1 SINE B4 -2 222 2 1 765 672 0 0 0 chr17 23672298 23672371 -71600280 - tRNA-Lys-AAG tRNA tRNA -3 73 1 1 765 419 246 122 30 chr17 23673760 23673885 -71598766 - B3A SINE B2 -6 192 69 1 765 180 0 0 0 chr17 23673908 23673928 -71598723 + (T)n Simple_repeat Simple_repeat 1 20 0 1 765 562 150 5 75 chr17 23674011 23674198 -71598453 + GA-rich Low_complexity Low_complexity 3 176 0 1 765 230 53 66 66 chr17 23674210 23674271 -71598380 + GA-rich Low_complexity Low_complexity 5 65 0 1 765 183 238 71 59 chr17 23674308 23674393 -71598258 + L3 LINE CR1 899 984 -3505 1 765 410 153 0 14 chr17 23674641 23674714 -71597937 - tRNA-Pro-CCY tRNA tRNA -3 72 1 1 765 334 262 0 12 chr17 23675191 23675272 -71597379 + B1_Mur2 SINE Alu 70 149 0 1 765 520 97 0 0 chr17 23675732 23675804 -71596847 - tRNA-Pro-CCA tRNA tRNA -3 72 1 1 765 440 313 9 9 chr17 23676211 23676327 -71596324 + ID_B1 SINE B4 82 197 -27 1 765 654 0 0 0 chr17 23677881 23677953 -71594698 + tRNA-Pro-CCG tRNA tRNA 1 72 -3 1 765 543 132 0 0 chr17 23678059 23678135 -71594516 - tRNA-Lys-AAG tRNA tRNA 0 76 1 1 765 225 270 8 73 chr17 23678638 23678762 -71593889 - Lx8 LINE L1 -2 7471 7356 1 765 184 77 51 0 chr17 23679737 23679776 -71592875 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 1 765 415 288 136 0 chr17 23680127 23680252 -71592399 + B1F SINE Alu 2 143 -6 1 765 211 175 17 17 chr17 23680252 23680310 -71592341 + GA-rich Low_complexity Low_complexity 1 58 0 2 765 282 79 0 0 chr17 23680333 23680371 -71592280 + RMER20A LTR ERVK 1 38 -478 2 765 280 182 18 0 chr17 23680379 23680434 -71592217 - RMER20A LTR ERVK -412 104 49 2 765 1897 181 45 6 chr17 23680440 23680796 -71591855 + RMER20A LTR ERVK 147 516 0 2 765 3526 125 63 72 chr17 23680879 23681542 -71591109 - RLTR33 LTR ERVK -21 657 1 2 765 344 237 129 0 chr17 23681750 23681843 -71590808 + B1_Mur4 SINE Alu 13 117 -33 2 765 1643 162 163 68 chr17 23681966 23682364 -71590287 + RMER6B LTR ERVK 1 436 -25 2 765 653 113 85 0 chr17 23682569 23682710 -71589941 - RMER17B LTR ERVK -499 459 307 2 765 870 53 117 44 chr17 23683095 23683232 -71589419 + B1_Mus2 SINE Alu 1 147 0 2 765 654 0 0 0 chr17 23683442 23683514 -71589137 - tRNA-Pro-CCA tRNA tRNA -3 72 1 2 765 672 0 0 0 chr17 23684326 23684399 -71588252 + tRNA-Lys-AAG tRNA tRNA 1 73 -3 2 765 26 0 0 0 chr17 23685112 23685138 -71587513 + AT_rich Low_complexity Low_complexity 1 26 0 2 765 265 340 37 37 chr17 23685155 23685175 -71587476 + ID_B1 SINE B4 77 176 -48 2 765 420 235 25 1 chr17 23685175 23685254 -71587397 + B1F2 SINE Alu 20 98 -51 2 765 396 0 0 0 chr17 23685254 23685298 -71587353 + (TATG)n Simple_repeat Simple_repeat 2 45 0 2 765 811 85 59 8 chr17 23685456 23685574 -71587077 + B1_Mm SINE Alu 1 124 -23 2 765 625 41 0 0 chr17 23685734 23685807 -71586844 - tRNA-Arg-AGG tRNA tRNA -3 73 1 2 765 387 193 135 11 chr17 23686743 23686832 -71585819 - PB1D10 SINE Alu -1 116 17 2 765 236 204 56 0 chr17 23686900 23686954 -71585697 - L1MB3 LINE L1 -34 6149 6093 2 765 660 14 0 0 chr17 23687228 23687302 -71585349 - tRNA-Arg-CGG tRNA tRNA -2 74 1 2 765 358 356 130 73 chr17 23688540 23688786 -71583865 + LTR53 LTR ERVL 203 474 -45 2 765 621 72 0 0 chr17 23688786 23688869 -71583782 + (GGGA)n Simple_repeat Simple_repeat 3 85 0 2 765 358 356 130 73 chr17 23688869 23688922 -71583729 + LTR53 LTR ERVL 475 518 -1 2 765 223 230 230 0 chr17 23689278 23689365 -71583286 - MIRm SINE MIR -9 267 161 2 765 189 0 0 0 chr17 23692535 23692556 -71580095 + (GGCTG)n Simple_repeat Simple_repeat 4 24 0 2 765 382 244 87 56 chr17 23695440 23695566 -71577085 + RSINE1 SINE B4 4 133 -32 2 765 273 100 27 41 chr17 23696754 23696827 -71575824 + C-rich Low_complexity Low_complexity 3 74 0 2 765 1431 52 0 67 chr17 23697288 23697496 -71575155 + B2_Mm2 SINE B2 2 195 0 2 765 694 84 64 18 chr17 23697771 23697880 -71574771 + B1_Mur3 SINE Alu 35 148 -1 2 765 740 261 111 0 chr17 23698978 23699146 -71573505 + ID_B1 SINE B4 4 191 -33 2 765 1020 225 5 0 chr17 23699146 23699337 -71573314 + B3 SINE B2 2 193 -23 2 765 1237 130 11 0 chr17 23699339 23699516 -71573135 + B2_Mm1t SINE B2 1 179 -14 2 765 285 254 108 31 chr17 23699548 23699630 -71573021 + B2_Mm2 SINE B2 47 129 -66 2 765 234 0 0 0 chr17 23699630 23699656 -71572995 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2 765 285 254 108 31 chr17 23699656 23699703 -71572948 + B2_Mm2 SINE B2 130 186 -9 2 765 676 129 129 0 chr17 23699730 23699854 -71572797 - B1_Mus1 SINE Alu 0 148 9 2 765 399 282 83 21 chr17 23699732 23699877 -71572774 - B4 SINE B4 -69 223 70 2 765 287 307 59 0 chr17 23699926 23700027 -71572624 + PB1D7 SINE Alu 7 113 -7 2 765 899 233 19 15 chr17 23700124 23700329 -71572322 + B3 SINE B2 1 206 -10 2 765 566 193 33 46 chr17 23702118 23702270 -71570381 - RMER1B Other Other -31 1035 886 2 765 693 250 46 7 chr17 23702296 23702449 -71570202 - B3 SINE B2 -10 206 48 2 765 2885 347 45 42 chr17 23702690 23703402 -71569249 + RodERV21-int LTR ERV1 2718 3413 -1578 2 765 1192 75 0 0 chr17 23703402 23703548 -71569103 + B1_Mus2 SINE Alu 2 147 0 2 765 2885 347 45 42 chr17 23703548 23704665 -71567986 + RodERV21-int LTR ERV1 3414 4553 -438 2 765 3242 70 2 0 chr17 23704850 23705249 -71567402 + MTB LTR MaLR 1 400 0 2 765 288 191 43 106 chr17 23705783 23705877 -71566774 - B4A SINE B4 -1 291 204 2 765 207 284 40 26 chr17 23706192 23706268 -71566383 - MIRc SINE MIR -127 141 65 2 765 237 185 37 0 chr17 23706289 23706343 -71566308 - L1MB2 LINE L1 -3 6168 6113 2 765 754 229 32 11 chr17 23706344 23706529 -71566122 - B3A SINE B2 -3 195 7 2 765 300 279 77 51 chr17 23706557 23706576 -71566075 + ID_B1 SINE B4 79 198 -26 2 765 565 133 92 0 chr17 23706576 23706674 -71565977 + B1_Mus2 SINE Alu 12 118 -29 2 765 780 234 34 39 chr17 23706780 23706958 -71565693 - MTD LTR MaLR -16 403 227 2 765 1657 142 53 37 chr17 23706966 23707266 -71565385 - RMER19B LTR ERVK -12 890 586 2 765 3202 101 132 24 chr17 23707266 23708216 -71564435 - MurERV4_19-int LTR ERVK -1352 4428 3377 2 765 1524 179 59 42 chr17 23708216 23708658 -71563993 - RLTR20D LTR ERVK -13 555 62 2 765 901 96 96 0 chr17 23708672 23708808 -71563843 + B2_Mm1t SINE B2 1 149 -44 2 765 265 73 55 0 chr17 23708811 23708866 -71563785 - B2_Mm2 SINE B2 -1 194 137 2 765 441 138 0 4 chr17 23708855 23708929 -71563722 - B2_Mm1t SINE B2 -107 109 38 2 765 590 69 138 0 chr17 23708927 23709014 -71563637 + B2_Mm2 SINE B2 50 148 -47 2 765 344 83 358 18 chr17 23709015 23709124 -71563527 - B2_Mm2 SINE B2 -3 192 47 2 765 1057 82 119 0 chr17 23709157 23709316 -71563335 - B2_Mm1t SINE B2 -14 179 2 2 765 288 59 0 19 chr17 23709350 23709402 -71563249 + B2_Mm2 SINE B2 139 189 -6 2 765 467 100 29 0 chr17 23709397 23709467 -71563184 - RLTR20D LTR ERVK -492 76 5 2 765 828 188 7 13 chr17 23709520 23709671 -71562980 + B1_Mur4 SINE Alu 1 150 0 2 765 218 184 0 0 chr17 23710143 23710181 -71562470 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 765 2077 210 72 113 chr17 23710521 23711133 -71561518 + LTRIS_Mus LTR ERV1 1 587 0 2 765 606 263 44 0 chr17 23711416 23711553 -71561098 + ID_B1 SINE B4 77 219 -5 2 765 802 206 0 14 chr17 23711555 23711703 -71560948 - B1_Mus1 SINE Alu -2 146 1 2 765 253 297 52 52 chr17 23711763 23711859 -71560792 - B3 SINE B2 -37 179 84 2 765 350 274 179 0 chr17 23712022 23712139 -71560512 + ID_B1 SINE B4 87 224 0 2 765 916 74 66 0 chr17 23712149 23712270 -71560381 + B1_Mus1 SINE Alu 1 129 -19 2 765 258 297 198 0 chr17 23712303 23712394 -71560257 + RSINE1 SINE B4 48 156 -9 2 765 234 0 0 0 chr17 23712429 23712455 -71560196 + (TTA)n Simple_repeat Simple_repeat 1 26 0 2 765 759 118 84 56 chr17 23712456 23712599 -71560052 - B1_Mus2 SINE Alu 0 147 1 2 765 213 39 0 0 chr17 23714137 23714163 -71558488 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 2 765 277 214 100 0 chr17 23714557 23714627 -71558024 + PB1D10 SINE Alu 31 107 -10 2 765 505 167 0 12 chr17 23714686 23714771 -71557880 + ID_B1 SINE B4 141 224 0 2 765 955 48 167 0 chr17 23714825 23714951 -71557700 + B1_Mus2 SINE Alu 1 147 0 2 765 743 276 45 36 chr17 23715440 23715654 -71556997 + B4 SINE B4 3 219 -73 2 765 180 0 0 0 chr17 23715654 23715674 -71556977 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2 765 587 86 187 19 chr17 23715683 23715790 -71556861 + B1_Mus1 SINE Alu 24 148 0 2 765 1166 52 0 0 chr17 23715795 23715931 -71556720 + B1_Mus1 SINE Alu 1 136 -12 2 765 287 113 0 16 chr17 23715959 23716022 -71556629 + (CAAAAA)n Simple_repeat Simple_repeat 2 63 0 2 765 414 0 0 0 chr17 23716090 23716136 -71556515 + (TC)n Simple_repeat Simple_repeat 1 46 0 2 765 456 19 0 0 chr17 23716136 23716188 -71556463 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 765 435 83 0 0 chr17 23716245 23716305 -71556346 + (TGGA)n Simple_repeat Simple_repeat 3 62 0 2 765 352 214 18 223 chr17 23716631 23716802 -71555849 - B1F1 SINE Alu -8 142 1 2 765 239 321 9 9 chr17 23717096 23717209 -71555442 - MurSatRep1 Unknown Unknown -1422 715 603 2 765 269 188 209 66 chr17 23718602 23718693 -71553958 + ID_B1 SINE B4 120 223 -1 2 765 1413 69 26 11 chr17 23718947 23719137 -71553514 - B2_Mm2 SINE B2 -2 193 1 2 765 265 275 61 168 chr17 23719265 23719333 -71553318 + RLTR25B LTR ERVK 319 382 -646 2 765 1661 36 0 0 chr17 23719333 23719525 -71553126 + B2_Mm1a SINE B2 2 193 0 2 765 265 275 61 168 chr17 23719525 23719670 -71552981 + RLTR25B LTR ERVK 383 509 -519 2 765 799 69 0 0 chr17 23719612 23719713 -71552938 + B1_Mm SINE Alu 47 147 0 2 765 387 261 84 54 chr17 23719956 23720122 -71552529 + RLTR13C2 LTR ERVK 638 808 0 2 765 585 215 57 8 chr17 23720158 23720280 -71552371 + B1_Mur4 SINE Alu 1 128 -22 2 765 797 151 0 39 chr17 23720300 23720479 -71552172 + GA-rich Low_complexity Low_complexity 1 172 0 2 765 312 274 75 0 chr17 23720562 23720668 -71551983 + B1F SINE Alu 36 149 0 2 765 198 71 0 0 chr17 23720752 23720780 -71551871 + (TCCC)n Simple_repeat Simple_repeat 2 29 0 2 765 250 211 133 53 chr17 23720798 23720873 -71551778 + ID4 SINE ID 1 81 -2 2 765 748 253 14 67 chr17 23720894 23721102 -71551549 + B3A SINE B2 1 197 -1 2 765 187 369 89 21 chr17 23721852 23722043 -71550608 - MIRc SINE MIR -35 233 30 2 765 408 40 0 0 chr17 23722062 23722112 -71550539 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 765 778 119 93 43 chr17 23723425 23723565 -71549086 + B1_Mur3 SINE Alu 3 149 0 2 95 438 149 0 13 chr17 23723978 23724053 -71548598 - B1_Mur2 SINE Alu -20 129 56 2 766 696 251 138 0 chr17 23724092 23724259 -71548392 + B3 SINE B2 2 191 -25 2 766 301 269 56 91 chr17 23724546 23724689 -71547962 + B1F SINE Alu 12 149 0 3 766 4070 54 30 0 chr17 23724720 23725217 -71547434 + LTRIS3 LTR ERV1 1 512 0 3 766 340 265 48 10 chr17 23725275 23725378 -71547273 + PB1D10 SINE Alu 11 117 0 3 766 234 312 17 2 chr17 23725379 23725444 -71547207 + ID4 SINE ID 3 67 -16 3 766 216 0 0 0 chr17 23725512 23725536 -71547115 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 766 679 137 88 0 chr17 23725556 23725658 -71546993 - B1_Mus1 SINE Alu -32 116 6 3 766 375 310 48 66 chr17 23725697 23725863 -71546788 + RSINE1 SINE B4 3 165 0 3 766 276 185 0 0 chr17 23725891 23725945 -71546706 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 766 647 223 24 114 chr17 23726069 23726111 -71546540 + B3A SINE B2 1 39 -159 3 766 1113 98 56 66 chr17 23726111 23726307 -71546344 + B2_Mm2 SINE B2 2 195 0 3 766 647 223 24 114 chr17 23726307 23726431 -71546220 + B3A SINE B2 40 152 -46 3 766 1073 85 43 0 chr17 23726930 23727071 -71545580 + B1_Mus1 SINE Alu 2 148 0 3 766 249 108 0 0 chr17 23727071 23727108 -71545543 + (A)n Simple_repeat Simple_repeat 1 37 0 3 766 533 276 82 0 chr17 23727247 23727381 -71545270 + ID_B1 SINE B4 80 224 0 3 766 304 203 156 84 chr17 23727365 23727532 -71545119 + RLTR25B LTR ERVK 331 509 -519 3 766 1000 100 0 28 chr17 23727435 23727579 -71545072 + B1_Mur4 SINE Alu 11 150 0 3 766 1301 55 37 0 chr17 23727638 23727801 -71544850 + B2_Mm2 SINE B2 1 169 -26 3 766 226 95 0 0 chr17 23727806 23727848 -71544803 + L1Md_F2 LINE L1 6532 6573 -9 3 766 372 246 121 15 chr17 23727978 23728110 -71544541 - B2_Mm2 SINE B2 -11 184 39 3 766 859 155 0 0 chr17 23728137 23728266 -71544385 + B1_Mus1 SINE Alu 2 130 -18 3 766 453 62 0 0 chr17 23728651 23728716 -71543935 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 3 766 496 223 19 0 chr17 23728732 23728835 -71543816 + PB1D9 SINE Alu 2 106 -14 3 766 300 111 0 0 chr17 23728836 23728881 -71543770 + (TGG)n Simple_repeat Simple_repeat 3 47 0 3 766 526 350 0 7 chr17 23728907 23729051 -71543600 + ID_B1 SINE B4 56 198 -26 3 766 322 276 0 0 chr17 23729221 23729297 -71543354 + B3 SINE B2 9 84 -132 3 766 452 151 14 0 chr17 23729343 23729416 -71543235 + B1_Mur2 SINE Alu 24 97 -52 3 766 287 268 14 14 chr17 23730126 23730217 -71542434 + ID4_ SINE ID 15 105 -47 3 766 553 262 183 23 chr17 23730225 23730444 -71542207 + B4A SINE B4 7 260 -32 3 766 304 315 32 43 chr17 23730489 23730582 -71542069 + B1F2 SINE Alu 2 93 -56 3 766 2015 192 20 41 chr17 23730593 23730983 -71541668 - RLTR14 LTR ERV1 0 382 1 3 766 624 27 0 0 chr17 23731058 23731132 -71541519 + (GAAA)n Simple_repeat Simple_repeat 1 74 0 3 766 1597 32 5 5 chr17 23731132 23731321 -71541330 + B2_Mm1t SINE B2 2 190 -3 3 766 1250 55 0 22 chr17 23731321 23731505 -71541146 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 766 1389 58 36 26 chr17 23731536 23731729 -71540922 + B2_Mm2 SINE B2 1 195 0 3 766 419 309 47 23 chr17 23731733 23731862 -71540789 + RSINE1 SINE B4 12 143 -22 3 766 1217 68 0 0 chr17 23732331 23732479 -71540172 - B1_Mus1 SINE Alu 0 148 1 3 766 1344 101 5 5 chr17 23732823 23733012 -71539639 + B2_Mm2 SINE B2 4 192 -3 3 766 206 192 39 0 chr17 23733016 23733068 -71539583 + (TCTG)n Simple_repeat Simple_repeat 4 57 0 3 766 300 263 0 50 chr17 23733119 23733199 -71539452 - B1F SINE Alu 0 149 74 3 766 460 290 50 88 chr17 23733268 23733427 -71539224 + B4 SINE B4 68 220 -72 3 766 845 204 7 0 chr17 23733290 23733432 -71539219 + B1_Mur2 SINE Alu 6 148 -1 3 766 21 0 0 0 chr17 23734003 23734024 -71538627 + AT_rich Low_complexity Low_complexity 1 21 0 3 766 343 315 23 30 chr17 23734024 23734155 -71538496 - MTD LTR MaLR -285 134 5 3 766 540 202 0 0 chr17 23734156 23734245 -71538406 + 4.5SRNA scRNA scRNA 2 90 -4 3 766 704 173 107 28 chr17 23734245 23734423 -71538228 + B2_Mm2 SINE B2 2 193 -2 3 766 1293 107 6 0 chr17 23734425 23734603 -71538048 + B2_Mm1a SINE B2 1 179 -14 3 766 648 0 0 0 chr17 23734604 23734676 -71537975 + (GAA)n Simple_repeat Simple_repeat 1 72 0 3 766 562 306 71 5 chr17 23734757 23734954 -71537697 + B4A SINE B4 1 210 -82 3 766 198 0 0 0 chr17 23734963 23734985 -71537666 + (CAAAC)n Simple_repeat Simple_repeat 2 23 0 3 766 511 234 108 0 chr17 23735022 23735133 -71537518 + B1_Mur1 SINE Alu 7 129 -20 3 766 660 102 0 0 chr17 23735134 23735232 -71537419 + (GGA)n Simple_repeat Simple_repeat 2 99 0 3 766 587 186 51 114 chr17 23735236 23735394 -71537257 + B1_Mur1 SINE Alu 2 149 0 3 766 195 353 91 75 chr17 23736271 23736458 -71536193 - L2b LINE L2 -35 3340 3151 3 766 256 167 0 0 chr17 23736852 23736894 -71535757 - RSINE1 SINE B4 -28 137 96 3 766 610 253 218 6 chr17 23736908 23737087 -71535564 - ID_B1 SINE B4 0 224 8 3 766 338 297 16 41 chr17 23737092 23737215 -71535436 - PB1D7 SINE Alu 0 120 1 3 766 737 176 32 8 chr17 23737236 23737362 -71535289 - B1_Mur2 SINE Alu -9 140 12 3 766 247 337 0 34 chr17 23737444 23737533 -71535118 + L2c LINE L2 3301 3386 -1 3 766 261 0 0 0 chr17 23738160 23738189 -71534462 + (A)n Simple_repeat Simple_repeat 1 29 0 3 766 264 216 118 26 chr17 23738384 23738460 -71534191 - RLTR23 LTR ERV1 -279 151 69 3 766 475 250 66 36 chr17 23738829 23738995 -71533656 - B2_Mm2 SINE B2 -2 193 23 3 766 341 234 84 11 chr17 23739138 23739233 -71533418 - B1F SINE Alu -1 148 47 3 766 595 211 170 50 chr17 23739287 23739487 -71533164 - ID_B1 SINE B4 0 224 1 3 766 258 128 191 0 chr17 23740362 23740409 -71532242 + B1_Mus2 SINE Alu 2 57 -90 3 766 711 90 0 0 chr17 23740409 23740509 -71532142 + (GAAA)n Simple_repeat Simple_repeat 1 100 0 3 766 829 232 31 36 chr17 23740944 23741136 -71531515 - B3 SINE B2 -25 191 1 3 766 337 326 20 34 chr17 23741422 23741571 -71531080 - B4A SINE B4 -140 152 6 3 766 480 233 200 36 chr17 23741592 23741757 -71530894 - ID_B1 SINE B4 -31 193 2 3 766 1035 99 35 0 chr17 23741868 23742010 -71530641 - B1_Mus2 SINE Alu 0 147 1 3 766 944 54 262 0 chr17 23742014 23742163 -71530488 - B2_Mm2 SINE B2 -7 188 1 3 766 396 239 35 52 chr17 23742184 23742299 -71530352 - B3 SINE B2 0 216 104 3 766 221 263 72 0 chr17 23742346 23742435 -71530216 - B1F2 SINE Alu -3 114 20 3 766 1097 51 0 0 chr17 23743168 23743305 -71529346 - B1_Mus2 SINE Alu -2 145 9 3 766 216 65 59 79 chr17 23743410 23743511 -71529140 + (TTTG)n Simple_repeat Simple_repeat 1 99 0 3 766 688 204 35 21 chr17 23743511 23743656 -71528995 - B1_Mur2 SINE Alu -1 148 2 3 766 306 136 0 70 chr17 23744668 23744810 -71527841 + (TTTG)n Simple_repeat Simple_repeat 2 133 0 3 766 1151 50 0 0 chr17 23744818 23744959 -71527692 - B1_Mus2 SINE Alu 0 147 7 3 766 411 268 5 120 chr17 23744853 23745044 -71527607 - MT2B LTR ERVL -337 264 96 3 766 723 179 6 62 chr17 23744959 23744979 -71527672 - ID_B1 SINE B4 0 224 73 3 766 366 279 77 0 chr17 23745330 23745434 -71527217 - PB1D10 SINE Alu -4 113 2 3 766 368 188 58 0 chr17 23745438 23745507 -71527144 + B3 SINE B2 129 201 -15 3 766 1146 68 141 0 chr17 23745510 23745673 -71526978 + B2_Mm2 SINE B2 2 187 -8 3 766 261 0 0 0 chr17 23745999 23746028 -71526623 + (CTG)n Simple_repeat Simple_repeat 1 29 0 3 766 330 26 0 0 chr17 23746028 23746067 -71526584 + (TCC)n Simple_repeat Simple_repeat 2 40 0 3 766 588 195 62 15 chr17 23746068 23746198 -71526453 - B1_Mus1 SINE Alu 0 148 13 3 766 264 263 127 87 chr17 23746104 23746254 -71526397 - MT2B LTR ERVL -343 258 103 3 766 379 318 28 18 chr17 23748003 23748112 -71524539 - PB1D10 SINE Alu 0 117 8 3 766 590 256 8 8 chr17 23748031 23748153 -71524498 - ID_B1 SINE B4 -55 169 48 3 766 832 88 9 0 chr17 23748681 23748795 -71523856 + B1_Mus2 SINE Alu 12 126 -21 3 766 240 263 0 0 chr17 23749021 23749078 -71523573 - ID_B1 SINE B4 -86 138 82 3 766 1290 81 6 22 chr17 23749079 23749257 -71523394 - B2_Mm2 SINE B2 -19 176 2 3 766 670 165 133 8 chr17 23749701 23749829 -71522822 - B1_Mur3 SINE Alu -1 148 5 3 766 1057 102 0 0 chr17 23750174 23750186 -71522465 - B1_Mus1 SINE Alu 0 148 137 3 766 180 0 0 0 chr17 23750186 23750206 -71522445 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 3 766 1057 102 0 0 chr17 23750206 23750340 -71522311 - B1_Mus1 SINE Alu -12 136 3 3 766 442 202 58 131 chr17 23750625 23750643 -71522008 - MT2B LTR ERVL -291 310 184 3 766 938 76 0 0 chr17 23750643 23750762 -71521889 - B1_Mus1 SINE Alu -9 139 21 3 766 1361 272 61 28 chr17 23750832 23751225 -71521426 - MT2A LTR ERVL -118 415 10 3 766 222 37 0 0 chr17 23751517 23751544 -71521107 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 766 1726 26 0 0 chr17 23751859 23752052 -71520599 + B2_Mm1a SINE B2 1 193 0 3 766 1004 82 214 0 chr17 23752103 23752262 -71520389 + B2_Mm2 SINE B2 2 194 -1 3 766 239 139 0 65 chr17 23752429 23752475 -71520176 - ORR1D1 LTR MaLR 0 374 332 3 766 1214 119 11 0 chr17 23752477 23752653 -71519998 + B2_Mm1t SINE B2 2 179 -14 4 766 330 141 0 71 chr17 23752704 23752773 -71519878 + B2_Mm2 SINE B2 47 109 -107 4 766 321 26 0 0 chr17 23752787 23752825 -71519826 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 4 766 1152 211 150 17 chr17 23752826 23753120 -71519531 - ORR1D1 LTR MaLR -41 333 1 3 766 612 244 148 11 chr17 23753164 23753346 -71519305 - RMER5 LTR ERV1 0 534 328 4 766 293 206 109 73 chr17 23753346 23753456 -71519195 + PB1D9 SINE Alu 4 117 -3 4 766 192 152 0 0 chr17 23753462 23753495 -71519156 + GA-rich Low_complexity Low_complexity 3 35 0 4 766 521 250 78 53 chr17 23753495 23753807 -71518844 - MT2A LTR ERVL -210 391 1 4 766 367 356 0 0 chr17 23754355 23754490 -71518161 - B1F SINE Alu -14 135 1 4 766 183 162 0 0 chr17 23754659 23754696 -71517955 + (CACCC)n Simple_repeat Simple_repeat 5 41 0 4 766 308 292 28 0 chr17 23754907 23755013 -71517638 + Lx8 LINE L1 6588 6696 -777 4 766 420 268 199 13 chr17 23755062 23755213 -71517438 + B3A SINE B2 2 180 -18 4 766 441 156 0 0 chr17 23755248 23755325 -71517326 + T-rich Low_complexity Low_complexity 1 77 0 4 766 180 0 0 0 chr17 23756323 23756343 -71516308 + (T)n Simple_repeat Simple_repeat 1 20 0 4 766 419 130 3 3 chr17 23756373 23756454 -71516197 - B1_Mus2 SINE Alu 0 147 40 4 766 2173 134 20 0 chr17 23756460 23756811 -71515840 - Lx2 LINE L1 -66 6931 6574 4 766 1141 83 0 0 chr17 23757898 23758043 -71514608 + B1_Mus2 SINE Alu 2 146 -1 4 766 351 217 98 0 chr17 23758209 23758301 -71514350 - L1MEg LINE L1 -4130 1954 1854 4 766 423 296 37 0 chr17 23758547 23758709 -71513942 + Lx8 LINE L1 6967 7134 -339 4 766 612 225 0 0 chr17 23759028 23759148 -71513503 + B3 SINE B2 1 120 -96 4 766 414 0 0 0 chr17 23759154 23759200 -71513451 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 766 1079 203 19 0 chr17 23759286 23759493 -71513158 + B3 SINE B2 2 212 -4 4 766 780 222 135 16 chr17 23759601 23759793 -71512858 - B3 SINE B2 0 216 2 4 766 841 133 0 0 chr17 23759802 23759922 -71512729 + B2_Mm2 SINE B2 1 120 -75 4 766 289 56 0 0 chr17 23759947 23759983 -71512668 - PB1D9 SINE Alu -83 37 2 4 766 245 143 0 106 chr17 23759983 23759994 -71512657 - B4 SINE B4 -170 122 81 4 766 369 0 0 0 chr17 23760093 23760134 -71512517 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 766 216 156 0 0 chr17 23760150 23760182 -71512469 - B1_Mus2 SINE Alu -54 93 62 4 766 1514 228 192 53 chr17 23760835 23761144 -71511507 + RMER1C Other Other 672 1030 -312 4 766 1158 52 0 0 chr17 23761144 23761279 -71511372 + B1_Mus1 SINE Alu 2 136 -12 4 766 246 32 0 0 chr17 23761280 23761311 -71511340 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 766 825 11 0 0 chr17 23761315 23761409 -71511242 + (GAAA)n Simple_repeat Simple_repeat 3 96 0 4 766 1514 228 192 53 chr17 23761409 23761585 -71511066 + RMER1C Other Other 1031 1222 -120 4 766 432 0 0 0 chr17 23761585 23761633 -71511018 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 766 1514 228 192 53 chr17 23761633 23761728 -71510923 + RMER1C Other Other 1223 1336 -6 4 766 1169 58 0 0 chr17 23761910 23762047 -71510604 - B1_Mus2 SINE Alu -9 138 2 4 766 2003 180 42 58 chr17 23762089 23762591 -71510060 + Lx9 LINE L1 7144 7637 -7 4 766 645 86 47 0 chr17 23762593 23762721 -71509930 + (TAGA)n Simple_repeat Simple_repeat 4 137 0 4 766 961 207 62 14 chr17 23762735 23762946 -71509705 + RLTR40 LTR ERVK 584 804 -13 4 766 776 123 129 15 chr17 23763327 23763459 -71509192 + B1_Mur4 SINE Alu 3 149 -1 4 766 628 336 46 14 chr17 23763710 23763991 -71508660 - B4A SINE B4 -2 290 1 4 766 353 292 64 142 chr17 23764044 23764085 -71508566 - MTC-int LTR MaLR -551 707 671 4 766 1174 61 133 0 chr17 23764085 23764250 -71508401 - B2_Mm1t SINE B2 -6 187 1 4 766 353 292 64 142 chr17 23764250 23764519 -71508132 - MTC-int LTR MaLR -588 670 421 4 766 182 74 37 0 chr17 23764946 23764973 -71507678 + L2a LINE L2 3148 3175 -251 4 766 469 227 258 0 chr17 23764983 23765146 -71507505 - B3 SINE B2 -11 205 1 4 766 235 309 19 113 chr17 23765264 23765370 -71507281 + MT2B LTR ERVL 154 249 -352 4 766 420 175 37 11 chr17 23765283 23765373 -71507278 + B1_Mm SINE Alu 9 101 -16 4 766 23 33 0 0 chr17 23765814 23765844 -71506807 + AT_rich Low_complexity Low_complexity 1 30 0 4 766 1272 97 37 11 chr17 23766132 23766319 -71506332 - B2_Mm2 SINE B2 -1 194 3 4 766 183 195 49 0 chr17 23766379 23766420 -71506231 - MER5A DNA MER1_type -51 138 96 4 766 938 158 7 0 chr17 23766461 23766607 -71506044 + B1_Mus1 SINE Alu 2 148 0 4 766 586 167 96 9 chr17 23769026 23769141 -71503510 - B1_Mur3 SINE Alu -24 125 1 4 766 302 215 40 144 chr17 23769037 23769162 -71503489 - MT2B LTR ERVL -337 264 153 4 766 511 240 180 0 chr17 23769179 23769329 -71503322 - B3A SINE B2 -18 180 4 4 766 183 80 0 0 chr17 23770289 23770314 -71502337 + (GGGTG)n Simple_repeat Simple_repeat 2 26 0 4 766 832 140 7 29 chr17 23770314 23770454 -71502197 + B1_Mur3 SINE Alu 12 148 -1 4 766 596 230 36 36 chr17 23770478 23770618 -71502033 + B1_Mur1 SINE Alu 2 141 -8 4 766 551 252 7 20 chr17 23771183 23771333 -71501318 - B1F2 SINE Alu 0 149 2 4 766 3185 106 147 17 chr17 23771971 23772259 -71500392 - RMER4B LTR ERVK -1 584 295 4 766 182 62 31 0 chr17 23772259 23772291 -71500360 + (CCAA)n Simple_repeat Simple_repeat 1 33 0 4 766 3185 106 147 17 chr17 23772291 23772519 -71500132 - RMER4B LTR ERVK -291 294 2 4 766 361 182 0 0 chr17 23772519 23772574 -71500077 - B1_Mur4 SINE Alu -84 66 12 4 766 236 305 52 30 chr17 23772652 23772787 -71499864 + L2 LINE L2 2099 2236 -1183 4 766 587 153 134 8 chr17 23774048 23774167 -71498484 + B1_Mur4 SINE Alu 5 138 -12 4 766 829 66 8 8 chr17 23774167 23774289 -71498362 + (GGAA)n Simple_repeat Simple_repeat 3 124 0 4 766 721 215 0 0 chr17 23774453 23774583 -71498068 - B3 SINE B2 -86 130 1 4 766 423 265 101 9 chr17 23775186 23775324 -71497327 - B1F SINE Alu 0 149 1 4 766 387 297 9 9 chr17 23775350 23775462 -71497189 - PB1D10 SINE Alu -3 114 3 4 766 781 280 191 3 chr17 23775711 23776005 -71496646 + MLT2C1 LTR ERVL 1 349 -48 4 766 343 197 0 14 chr17 23776005 23776077 -71496574 + B1F SINE Alu 75 145 -4 4 766 918 212 73 11 chr17 23776138 23776329 -71496322 + B3 SINE B2 1 203 -13 4 766 473 234 155 8 chr17 23776362 23776491 -71496160 - B1_Mur1 SINE Alu -1 148 1 4 766 381 43 0 0 chr17 23776492 23776539 -71496112 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 766 832 246 102 0 chr17 23777309 23777496 -71495155 + B3 SINE B2 11 216 0 4 766 1370 88 5 35 chr17 23777524 23777725 -71494926 + B2_Mm2 SINE B2 1 195 0 4 766 190 56 27 27 chr17 23777725 23777762 -71494889 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 4 766 1013 216 65 47 chr17 23777983 23778260 -71494391 - B4 SINE B4 -4 288 7 4 766 207 0 0 0 chr17 23778282 23778305 -71494346 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 766 1176 69 0 0 chr17 23778305 23778449 -71494202 - B1_Mm SINE Alu -3 144 1 4 766 514 149 272 0 chr17 23778506 23778620 -71494031 - B1_Mur4 SINE Alu -1 149 5 4 766 289 248 109 50 chr17 23779039 23779158 -71493493 + PB1 SINE Alu 1 126 -1 4 766 4781 62 5 3 chr17 23779438 23780024 -71492627 + LTRIS_Mus LTR ERV1 1 587 0 4 766 348 259 83 9 chr17 23780444 23780553 -71492098 + PB1D10 SINE Alu 1 117 0 4 766 1187 41 7 7 chr17 23780795 23780941 -71491710 + B1_Mm SINE Alu 2 147 0 4 766 210 37 0 0 chr17 23782632 23782659 -71489992 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 766 1156 22 37 0 chr17 23782664 23782800 -71489851 - B1_Mm SINE Alu -5 142 2 4 766 396 0 0 0 chr17 23782853 23782897 -71489754 + (A)n Simple_repeat Simple_repeat 1 44 0 4 766 420 222 229 0 chr17 23783162 23783315 -71489336 - MLT1B LTR MaLR 0 390 203 4 766 4960 193 42 40 chr17 23783440 23784502 -71488149 - RMER1B Other Other 0 1066 2 4 766 424 214 155 0 chr17 23784645 23784748 -71487903 - PB1D9 SINE Alu 0 120 2 4 766 456 222 179 0 chr17 23784871 23784988 -71487663 + B1_Mus2 SINE Alu 9 146 -1 4 766 330 250 76 43 chr17 23785007 23785099 -71487552 - PB1D7 SINE Alu -21 99 5 4 766 1352 86 27 5 chr17 23785112 23785300 -71487351 - B2_Mm1t SINE B2 0 193 2 4 766 432 242 82 32 chr17 23785356 23785514 -71487137 + RLTR15 LTR ERVK 178 343 -16 4 766 287 254 0 0 chr17 23785673 23785732 -71486919 + ID_B1 SINE B4 98 156 -68 4 766 382 250 135 0 chr17 23785757 23785861 -71486790 + ID_B1 SINE B4 103 220 -4 4 766 1402 101 5 0 chr17 23785976 23786165 -71486486 - B2_Mm1a SINE B2 -2 191 2 4 766 846 67 33 0 chr17 23786415 23786535 -71486116 + B1_Mus1 SINE Alu 2 125 -23 4 766 195 129 0 0 chr17 23786591 23786622 -71486029 + (GAAA)n Simple_repeat Simple_repeat 3 33 0 4 766 556 159 186 23 chr17 23786774 23786903 -71485748 - B1_Mur4 SINE Alu 0 150 1 4 766 688 276 44 6 chr17 23786907 23787089 -71485562 - ID_B1 SINE B4 -1 223 35 4 766 1231 97 40 0 chr17 23787208 23787383 -71485268 + B2_Mm1t SINE B2 1 182 -11 4 766 342 101 0 21 chr17 23787445 23787511 -71485140 + B2_Mm2 SINE B2 47 109 -107 4 766 270 81 0 0 chr17 23787525 23787562 -71485089 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 4 766 642 117 0 0 chr17 23787564 23787675 -71484976 + (GAAA)n Simple_repeat Simple_repeat 3 113 0 4 766 326 214 12 0 chr17 23787803 23787887 -71484764 + G-rich Low_complexity Low_complexity 1 85 0 5 766 375 219 67 89 chr17 23788057 23788192 -71484459 + MT2B LTR ERVL 147 278 -323 5 766 819 93 15 23 chr17 23788086 23788218 -71484433 + B1_Mur4 SINE Alu 19 149 -1 5 766 216 289 9 17 chr17 23788218 23788334 -71484317 + GA-rich Low_complexity Low_complexity 1 115 0 5 766 253 348 117 28 chr17 23788584 23788729 -71483922 + B4A SINE B4 73 230 -62 5 766 716 192 7 46 chr17 23788730 23788883 -71483768 + B1_Mur1 SINE Alu 3 149 0 5 766 214 62 0 0 chr17 23788978 23789010 -71483641 + B3A SINE B2 1 32 -166 5 766 950 214 10 44 chr17 23789329 23789534 -71483117 + B3A SINE B2 1 198 0 5 766 1309 61 70 22 chr17 23789555 23789740 -71482911 + B2_Mm2 SINE B2 1 194 -1 5 766 1232 64 23 0 chr17 23789932 23790105 -71482546 + B2_Mm2 SINE B2 14 190 -5 5 766 872 70 31 0 chr17 23790114 23790243 -71482408 + B2_Mm2 SINE B2 1 133 -62 5 766 1088 50 0 0 chr17 23790251 23790392 -71482259 + B1_Mus1 SINE Alu 8 148 0 5 766 390 296 75 61 chr17 23790415 23790580 -71482071 + B3 SINE B2 30 196 -20 5 766 258 250 16 0 chr17 23790814 23790878 -71481773 + CT-rich Low_complexity Low_complexity 4 68 0 5 766 291 328 52 0 chr17 23790881 23790997 -71481654 - B1_Mur3 SINE Alu -21 128 7 5 766 417 254 35 26 chr17 23790894 23791007 -71481644 - ID_B1 SINE B4 -31 193 80 5 766 198 0 0 0 chr17 23791056 23791078 -71481573 + (A)n Simple_repeat Simple_repeat 1 22 0 5 766 487 157 64 18 chr17 23791189 23791299 -71481352 - PB1D7 SINE Alu -5 115 1 5 766 1387 80 17 0 chr17 23791949 23792125 -71480526 + B2_Mm1t SINE B2 1 179 -14 5 766 1205 48 7 0 chr17 23792129 23792275 -71480376 - B1_Mus2 SINE Alu 0 147 1 5 766 227 213 0 21 chr17 23792290 23792318 -71480333 + A-rich Low_complexity Low_complexity 4 31 0 5 766 1260 41 0 0 chr17 23792318 23792464 -71480187 + B1_Mus2 SINE Alu 2 147 0 5 766 227 213 0 21 chr17 23792464 23792483 -71480168 + A-rich Low_complexity Low_complexity 32 50 0 5 766 1256 214 16 8 chr17 23792607 23792862 -71479789 - MT2A LTR ERVL -92 441 185 5 766 697 174 0 8 chr17 23792925 23793047 -71479604 - B1F2 SINE Alu -2 147 27 5 766 708 215 0 36 chr17 23793073 23793213 -71479438 - B1_Mur3 SINE Alu -14 135 1 5 766 317 267 13 0 chr17 23793522 23793597 -71479054 - B1F SINE Alu -8 141 66 5 766 260 292 162 34 chr17 23793597 23793639 -71479012 - ID_B1 SINE B4 -8 216 85 5 766 281 229 22 42 chr17 23793696 23793797 -71478854 - PB1D10 SINE Alu 0 127 21 5 766 294 361 0 20 chr17 23794535 23794634 -71478017 + PB1D10 SINE Alu 21 117 0 5 766 248 259 0 12 chr17 23794634 23794716 -71477935 + A-rich Low_complexity Low_complexity 5 85 0 5 766 286 417 21 21 chr17 23794890 23795081 -71477570 - MIR SINE MIR -71 191 1 5 766 220 222 0 69 chr17 23795304 23795362 -71477289 - B1F2 SINE Alu -59 90 37 5 766 867 167 21 7 chr17 23795460 23795605 -71477046 - B1_Mus1 SINE Alu 0 148 2 5 766 216 0 0 0 chr17 23795620 23795644 -71477007 + (T)n Simple_repeat Simple_repeat 1 24 0 5 766 252 282 28 0 chr17 23795704 23795775 -71476876 + tRNA-Ala-GCY_ tRNA tRNA 2 74 -1 5 766 435 38 0 0 chr17 23795784 23795837 -71476814 + (TC)n Simple_repeat Simple_repeat 1 53 0 5 766 485 276 83 6 chr17 23795839 23795996 -71476655 + MER63A DNA AcHobo 41 209 -1 5 766 890 57 0 8 chr17 23796303 23796427 -71476224 + B1_Mus2 SINE Alu 25 147 0 5 766 746 259 34 14 chr17 23796442 23796650 -71476001 + ID_B1 SINE B4 2 213 -11 5 766 1892 193 47 22 chr17 23796694 23797059 -71475592 + ORR1D1 LTR MaLR 1 374 0 5 766 424 183 0 123 chr17 23799242 23799348 -71473303 + PB1D9 SINE Alu 28 120 0 5 766 201 184 26 0 chr17 23799348 23799386 -71473265 + GA-rich Low_complexity Low_complexity 1 39 0 5 766 552 218 32 16 chr17 23799493 23799619 -71473032 + ID_B1 SINE B4 97 224 0 5 766 313 324 0 0 chr17 23799638 23799712 -71472939 + ID4 SINE ID 5 78 -5 5 766 367 258 100 15 chr17 23799735 23799865 -71472786 + B1_Mur1 SINE Alu 2 142 -7 5 766 839 218 7 0 chr17 23800446 23800593 -71472058 + B1_Mur3 SINE Alu 2 149 0 5 766 202 75 75 0 chr17 23800596 23800636 -71472015 + (GAAAA)n Simple_repeat Simple_repeat 3 45 0 5 766 306 346 18 18 chr17 23800838 23800947 -71471704 - PB1D10 SINE Alu -8 109 1 5 766 1683 21 11 0 chr17 23801147 23801337 -71471314 - B2_Mm1a SINE B2 0 193 2 5 766 219 269 193 0 chr17 23801615 23801734 -71470917 + MIRb SINE MIR 119 260 -8 5 766 196 209 179 0 chr17 23803318 23803385 -71469266 + MIR SINE MIR 103 181 -81 5 766 284 263 39 25 chr17 23805619 23805731 -71466920 + B1F SINE Alu 1 141 -8 5 766 824 178 20 0 chr17 23806633 23806779 -71465872 - B1_Mur2 SINE Alu 0 149 1 5 766 213 39 0 0 chr17 23807943 23807969 -71464682 + (CCCCCA)n Simple_repeat Simple_repeat 4 29 0 5 766 1205 48 0 0 chr17 23808066 23808212 -71464439 + B1_Mm SINE Alu 2 147 0 5 766 346 321 43 7 chr17 23808339 23808361 -71464290 + B1F1 SINE Alu 1 103 -46 5 766 474 213 18 36 chr17 23808361 23808473 -71464178 + ID_B1 SINE B4 105 214 -10 5 766 416 250 260 29 chr17 23808480 23808653 -71463998 + ID_B1 SINE B4 5 217 -7 5 766 392 198 111 8 chr17 23808701 23808818 -71463833 + B3 SINE B2 2 130 -86 5 766 202 179 36 0 chr17 23808830 23808886 -71463765 + CT-rich Low_complexity Low_complexity 2 59 0 5 766 413 243 98 9 chr17 23808900 23809012 -71463639 - B1F2 SINE Alu -12 137 16 5 766 618 250 107 24 chr17 23809016 23809184 -71463467 - B3A SINE B2 -16 182 1 5 766 274 229 145 0 chr17 23809188 23809271 -71463380 + B3 SINE B2 122 216 0 5 766 314 264 22 54 chr17 23809291 23809383 -71463268 + B1_Mus2 SINE Alu 1 89 -58 5 766 1033 123 0 0 chr17 23809388 23809526 -71463125 + B1_Mur4 SINE Alu 5 142 -8 5 766 369 0 0 0 chr17 23809526 23809567 -71463084 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 766 382 307 41 35 chr17 23809662 23809807 -71462844 - B3A SINE B2 -7 191 46 5 766 433 295 14 28 chr17 23809835 23809978 -71462673 + ID_B1 SINE B4 44 184 -40 5 766 644 190 41 21 chr17 23810110 23810255 -71462396 - B1_Mur1 SINE Alu 0 149 2 5 766 383 239 43 129 chr17 23810113 23810276 -71462375 - B4 SINE B4 -69 223 75 5 766 363 330 0 10 chr17 23814835 23814936 -71457715 - PB1D7 SINE Alu -15 105 6 5 766 364 286 95 45 chr17 23815066 23815245 -71457406 - B3A SINE B2 -10 188 1 5 766 252 0 0 0 chr17 23815259 23815287 -71457364 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 5 766 225 73 91 0 chr17 23815289 23815344 -71457307 + T-rich Low_complexity Low_complexity 1 60 0 5 766 1192 55 7 0 chr17 23815345 23815491 -71457160 - B1_Mm SINE Alu 0 147 1 5 766 907 134 21 14 chr17 23815494 23815638 -71457013 - B1_Mur3 SINE Alu -3 146 2 5 766 338 0 0 23 chr17 23815659 23815702 -71456949 + (TTTC)n Simple_repeat Simple_repeat 4 45 0 5 766 1056 102 7 0 chr17 23815702 23815849 -71456802 - B1_Mus1 SINE Alu 0 148 1 5 766 543 202 0 0 chr17 23815883 23815977 -71456674 + RSINE1 SINE B4 10 103 -62 5 766 189 0 0 0 chr17 23816005 23816026 -71456625 + (TCG)n Simple_repeat Simple_repeat 2 22 0 5 766 595 266 78 65 chr17 23817500 23817717 -71454934 + ID_B1 SINE B4 5 224 0 5 766 316 242 15 26 chr17 23818769 23818861 -71453790 - ID4_ SINE ID -50 102 11 5 766 241 299 15 0 chr17 23818896 23818963 -71453688 - PB1D10 SINE Alu -7 110 43 5 766 640 197 23 8 chr17 23822062 23822190 -71450461 - B1_Mm SINE Alu -17 130 1 5 766 437 173 62 0 chr17 23822213 23822294 -71450357 - B1_Mus2 SINE Alu -61 86 1 5 766 1143 107 101 0 chr17 23822302 23822471 -71450180 - B2_Mm2 SINE B2 -9 186 1 5 766 456 219 71 71 chr17 23822505 23822618 -71450033 + B1_Mur2 SINE Alu 4 116 -33 5 766 180 152 0 0 chr17 23822638 23822671 -71449980 + A-rich Low_complexity Low_complexity 1 33 0 5 766 558 106 32 11 chr17 23822695 23822790 -71449861 + PB1D9 SINE Alu 23 119 -1 5 766 324 70 0 0 chr17 23822840 23822883 -71449768 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 766 3823 14 121 0 chr17 23822986 23823426 -71449225 - MT2_Mm LTR ERVL 0 493 1 5 766 297 0 0 0 chr17 23823426 23823464 -71449187 - MERVL-int LTR ERVL 0 5485 5448 5 766 374 167 46 35 chr17 23823464 23823551 -71449100 - ORR1A3-int LTR MaLR -1323 640 553 5 766 45924 15 6 0 chr17 23823551 23828877 -71443774 - MERVL-int LTR ERVL -125 5360 1 5 766 3823 14 121 0 chr17 23828877 23829317 -71443334 - MT2_Mm LTR ERVL 0 493 1 5 766 418 252 72 16 chr17 23829330 23829455 -71443196 + B3A SINE B2 62 193 -5 5 766 649 71 44 0 chr17 23829458 23829574 -71443077 - B1_Mus2 SINE Alu -6 143 9 5 766 702 138 25 82 chr17 23829653 23829811 -71442840 + B1_Mur3 SINE Alu 1 149 0 5 766 281 186 14 0 chr17 23829811 23829881 -71442770 + GA-rich Low_complexity Low_complexity 2 72 0 5 766 1323 112 21 0 chr17 23829947 23830135 -71442516 - B2_Mm2 SINE B2 -2 193 2 5 766 398 108 15 0 chr17 23830423 23830488 -71442163 + (GA)n Simple_repeat Simple_repeat 2 67 0 5 766 282 87 0 0 chr17 23830560 23830606 -71442045 + (CAGA)n Simple_repeat Simple_repeat 2 47 0 5 766 309 169 34 0 chr17 23830615 23830674 -71441977 - RSINE1 SINE B4 -46 119 59 5 766 381 195 69 0 chr17 23830955 23831031 -71441620 + B1_Mm SINE Alu 42 123 -24 6 766 234 0 0 0 chr17 23831031 23831057 -71441594 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 6 766 378 308 117 25 chr17 23831118 23831281 -71441370 - B3A SINE B2 -18 180 3 6 766 421 288 11 111 chr17 23831317 23831497 -71441154 - RSINE1 SINE B4 0 165 4 6 766 204 40 0 0 chr17 23832244 23832269 -71440382 + (T)n Simple_repeat Simple_repeat 1 25 0 6 766 573 139 184 24 chr17 23832269 23832394 -71440257 - B1_Mur4 SINE Alu 0 150 6 6 766 1064 91 28 0 chr17 23833259 23833402 -71439249 - B1_Mus1 SINE Alu 0 148 2 6 766 751 136 0 16 chr17 23833909 23834036 -71438615 + B1_Mus1 SINE Alu 24 148 0 6 766 657 164 36 0 chr17 23834680 23834790 -71437861 - B1_Mur1 SINE Alu -33 116 3 6 766 1244 34 0 7 chr17 23834868 23835015 -71437636 + B1_Mm SINE Alu 2 147 0 6 766 377 345 31 79 chr17 23835016 23835243 -71437408 + MLT1D LTR MaLR 288 503 -2 6 766 305 272 16 109 chr17 23835702 23835830 -71436821 + PB1D10 SINE Alu 1 116 -1 6 766 538 175 9 28 chr17 23835820 23835926 -71436725 + B1_Mur3 SINE Alu 40 143 -6 6 766 251 113 19 0 chr17 23835926 23835979 -71436672 + (CAAAAA)n Simple_repeat Simple_repeat 1 54 0 6 766 355 280 9 27 chr17 23836207 23836317 -71436334 - PB1D10 SINE Alu -9 108 1 6 766 207 69 0 0 chr17 23836508 23836537 -71436114 + (CGG)n Simple_repeat Simple_repeat 2 30 0 6 766 352 289 6 23 chr17 23836572 23836749 -71435902 + (CGG)n Simple_repeat Simple_repeat 3 176 0 6 766 231 330 130 0 chr17 23837429 23837529 -71435122 - ID_B1 SINE B4 -1 223 111 6 766 624 213 59 0 chr17 23837528 23837664 -71434987 + RSINE1 SINE B4 22 165 0 6 766 270 0 0 0 chr17 23837683 23837713 -71434938 + (A)n Simple_repeat Simple_repeat 1 30 0 6 766 651 290 70 30 chr17 23837736 23837935 -71434716 + ID_B1 SINE B4 2 208 -16 6 766 269 340 19 9 chr17 23838045 23838152 -71434499 - YREP_Mm Unknown Unknown -1498 314 207 6 766 451 322 0 0 chr17 23838061 23838182 -71434469 + ID_B1 SINE B4 102 222 -2 6 766 656 261 56 36 chr17 23838246 23838441 -71434210 + B3 SINE B2 5 203 -13 6 766 436 184 0 87 chr17 23838461 23838657 -71433994 + (CATA)n Simple_repeat Simple_repeat 1 179 0 6 766 404 204 0 64 chr17 23838668 23838841 -71433810 + (CATA)n Simple_repeat Simple_repeat 1 162 0 6 766 687 100 150 0 chr17 23838942 23839062 -71433589 + B1_Mm SINE Alu 9 146 -1 6 766 219 274 63 133 chr17 23839105 23839248 -71433403 + ID_B1 SINE B4 1 133 -91 6 766 288 0 0 0 chr17 23839451 23839483 -71433168 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 766 21 0 0 0 chr17 23839584 23839605 -71433046 + AT_rich Low_complexity Low_complexity 1 21 0 6 766 1233 41 0 14 chr17 23839853 23840001 -71432650 - B1_Mus2 SINE Alu 0 147 2 6 766 306 200 0 0 chr17 23840035 23840095 -71432556 + B1F SINE Alu 1 60 -89 6 766 2542 154 61 42 chr17 23840098 23840532 -71432119 + RLTR20A1 LTR ERVK 1 448 -103 6 766 222 118 0 0 chr17 23840532 23840566 -71432085 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 766 2542 154 61 42 chr17 23840566 23840672 -71431979 + RLTR20A1 LTR ERVK 449 550 -1 6 766 247 250 11 77 chr17 23840672 23840763 -71431888 + ID_B1 SINE B4 139 223 -1 6 766 306 0 0 0 chr17 23840767 23840801 -71431850 + (GA)n Simple_repeat Simple_repeat 2 35 0 6 766 467 219 28 42 chr17 23840809 23840952 -71431699 + RSINE1 SINE B4 25 165 0 6 766 1094 212 43 5 chr17 23841006 23841214 -71431437 - B3 SINE B2 0 216 1 6 766 384 202 9 27 chr17 23841327 23841439 -71431212 + CT-rich Low_complexity Low_complexity 3 112 0 6 766 231 209 149 0 chr17 23841442 23841509 -71431142 - PB1D10 SINE Alu 0 117 41 6 766 231 163 19 58 chr17 23841674 23841726 -71430925 + MLT1B LTR MaLR 45 94 -296 6 766 198 0 0 0 chr17 23841816 23841838 -71430813 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 6 766 230 372 25 42 chr17 23843455 23843573 -71429078 + RSINE1 SINE B4 44 159 -6 6 766 889 164 0 27 chr17 23843603 23843753 -71428898 + B1_Mus2 SINE Alu 2 147 0 6 766 417 86 0 0 chr17 23843755 23843813 -71428838 + (ATG)n Simple_repeat Simple_repeat 2 59 0 6 766 431 238 0 109 chr17 23844075 23844090 -71428561 + ID_B1 SINE B4 78 222 0 6 766 690 206 0 47 chr17 23844090 23844238 -71428413 + B1_Mur1 SINE Alu 9 149 0 6 766 188 67 33 0 chr17 23844251 23844281 -71428370 + (GAGAA)n Simple_repeat Simple_repeat 2 32 0 6 766 264 250 0 0 chr17 23845637 23845705 -71426946 + C-rich Low_complexity Low_complexity 1 68 0 6 766 311 71 129 27 chr17 23846161 23846277 -71426374 - B2_Mm2 SINE B2 0 195 47 6 766 1356 85 11 0 chr17 23846338 23846515 -71426136 - B2_Mm1t SINE B2 -14 179 1 6 766 1617 182 145 8 chr17 23847893 23848258 -71424393 + MTD LTR MaLR 5 419 0 6 766 21 0 0 0 chr17 23848393 23848414 -71424237 + GC_rich Low_complexity Low_complexity 1 21 0 6 766 692 236 0 33 chr17 23850927 23851080 -71421571 - B1_Mur1 SINE Alu -1 148 1 6 766 412 281 73 7 chr17 23851080 23851216 -71421435 - ID_B1 SINE B4 0 224 80 6 766 391 309 48 0 chr17 23851203 23851329 -71421322 - B1F SINE Alu -16 133 2 6 766 28 61 0 0 chr17 23851881 23851930 -71420721 + AT_rich Low_complexity Low_complexity 1 49 0 6 766 252 0 0 0 chr17 23851956 23851984 -71420667 + (TC)n Simple_repeat Simple_repeat 1 28 0 6 766 555 43 0 0 chr17 23851984 23852053 -71420598 + (CA)n Simple_repeat Simple_repeat 1 70 0 6 766 601 173 58 0 chr17 23852112 23852216 -71420435 - B1_Mus1 SINE Alu -7 141 32 6 766 1182 82 0 0 chr17 23852242 23852389 -71420262 - B1_Mm SINE Alu 0 147 1 6 766 1380 74 5 55 chr17 23852389 23852589 -71420062 - B2_Mm1a SINE B2 -1 192 2 6 766 186 43 0 0 chr17 23853660 23853683 -71418968 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 766 1249 97 57 0 chr17 23854430 23854606 -71418045 + B2_Mm2 SINE B2 3 188 -7 6 767 642 235 15 0 chr17 23855634 23855766 -71416885 - B1F SINE Alu -15 134 1 6 767 1194 75 0 0 chr17 23856074 23856221 -71416430 + B1_Mus1 SINE Alu 2 148 0 6 767 707 100 0 0 chr17 23856245 23856345 -71416306 + B2_Mm2 SINE B2 46 145 -50 6 767 270 0 0 0 chr17 23857428 23857458 -71415193 + (CCCCAG)n Simple_repeat Simple_repeat 4 33 0 6 767 180 339 157 0 chr17 23859179 23859294 -71413357 - MIRc SINE MIR -124 144 12 6 767 697 238 14 7 chr17 23860516 23860664 -71411987 - B1_Mur1 SINE Alu 0 149 1 6 767 1194 182 0 9 chr17 23860823 23861045 -71411606 - URR1B DNA MER1_type 0 225 6 6 767 207 0 0 0 chr17 23861161 23861184 -71411467 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 6 767 1636 47 0 0 chr17 23861195 23861387 -71411264 + B2_Mm1a SINE B2 2 193 0 6 767 240 282 47 0 chr17 23861451 23861536 -71411115 - MIRb SINE MIR -52 216 128 6 767 235 195 0 0 chr17 23861696 23861737 -71410914 - ID SINE ID -146 78 38 6 767 226 316 13 13 chr17 23861737 23861773 -71410878 - ID4_ SINE ID -6 77 1 6 767 231 246 24 205 chr17 23861773 23861957 -71410694 - MT2B LTR ERVL -286 315 170 6 767 614 221 7 67 chr17 23861812 23861962 -71410689 - B1F SINE Alu -8 141 1 6 767 301 279 40 155 chr17 23861962 23861986 -71410665 - B4 SINE B4 -74 218 65 6 767 194 33 67 0 chr17 23861994 23862024 -71410627 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 6 767 218 290 45 91 chr17 23862031 23862043 -71410608 - PB1D10 SINE Alu 0 117 106 6 767 1380 71 71 0 chr17 23862043 23862225 -71410426 - B2_Mm2 SINE B2 0 195 1 6 767 353 290 45 87 chr17 23862225 23862326 -71410325 - PB1 SINE Alu -17 110 9 6 767 207 0 0 0 chr17 23862343 23862366 -71410285 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 6 767 184 342 40 32 chr17 23862746 23862870 -71409781 + L3 LINE CR1 3943 4067 -422 6 767 213 182 0 0 chr17 23863563 23863596 -71409055 + (CCGCG)n Simple_repeat Simple_repeat 5 37 0 6 767 593 216 119 9 chr17 23864309 23864466 -71408185 - B3 SINE B2 -4 194 26 6 767 767 305 19 44 chr17 23865057 23865312 -71407339 + ID_B1 SINE B4 1 245 -47 6 767 1131 74 0 7 chr17 23865320 23865458 -71407193 + B1_Mus1 SINE Alu 1 138 -10 6 767 216 0 0 0 chr17 23865458 23865482 -71407169 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 767 249 258 32 0 chr17 23865513 23865575 -71407076 + ID4 SINE ID 2 65 -18 6 767 513 214 12 14 chr17 23865731 23865856 -71406795 + B1F SINE Alu 9 127 -22 6 767 287 216 68 0 chr17 23865898 23865986 -71406665 - L1M4 LINE L1 -1198 4948 4855 6 767 385 202 76 0 chr17 23865988 23866067 -71406584 + PB1D10 SINE Alu 25 109 -8 6 767 1023 137 0 0 chr17 23866095 23866241 -71406410 - B1_Mur4 SINE Alu 0 150 5 6 767 1418 280 51 61 chr17 23866451 23866960 -71405691 - RLTR18B LTR ERVK -3 509 6 6 767 312 306 42 56 chr17 23866904 23867046 -71405605 - ID_B1 SINE B4 -71 153 14 6 767 868 172 0 13 chr17 23867058 23867301 -71405350 + CT-rich Low_complexity Low_complexity 1 239 0 6 767 218 37 0 0 chr17 23867303 23867330 -71405321 + (TC)n Simple_repeat Simple_repeat 2 28 0 6 767 195 42 0 0 chr17 23867330 23867354 -71405297 + (TTTCC)n Simple_repeat Simple_repeat 3 26 0 6 767 663 172 99 56 chr17 23867358 23867500 -71405151 - B1_Mur1 SINE Alu 0 149 2 6 767 644 209 217 17 chr17 23867519 23867699 -71404952 - B3 SINE B2 0 216 1 6 767 312 352 28 0 chr17 23867707 23867815 -71404836 - PB1D10 SINE Alu -5 112 2 6 767 189 0 0 0 chr17 23867975 23867996 -71404655 + (TTG)n Simple_repeat Simple_repeat 1 21 0 6 767 478 287 66 0 chr17 23868002 23868138 -71404513 - B1F2 SINE Alu -4 145 1 7 767 879 325 157 56 chr17 23868157 23868504 -71404147 - L1M4b LINE L1 -6533 801 421 7 767 1200 55 7 0 chr17 23868504 23868650 -71404001 + B1_Mus1 SINE Alu 1 147 -1 7 767 879 325 157 56 chr17 23868650 23868944 -71403707 - L1M4b LINE L1 -6914 420 95 7 767 299 150 17 0 chr17 23870188 23870248 -71402403 + GA-rich Low_complexity Low_complexity 2 62 0 7 767 691 129 137 0 chr17 23870248 23870372 -71402279 - B2_Mm2 SINE B2 -53 142 2 7 767 299 236 6 16 chr17 23872404 23872489 -71400162 - PB1D10 SINE Alu -37 112 27 7 767 263 297 87 19 chr17 23872489 23872507 -71400144 - ID_B1 SINE B4 -34 190 81 7 767 191 88 29 0 chr17 23873420 23873454 -71399197 + (TTC)n Simple_repeat Simple_repeat 1 35 0 7 767 197 159 23 0 chr17 23874973 23875017 -71397634 + GA-rich Low_complexity Low_complexity 2 46 0 7 767 541 268 70 19 chr17 23875402 23875558 -71397093 + RSINE1 SINE B4 2 165 0 7 767 182 37 0 36 chr17 23875892 23875920 -71396731 + (TCTG)n Simple_repeat Simple_repeat 3 29 0 7 767 226 0 0 56 chr17 23878214 23878250 -71394401 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 767 1049 39 62 0 chr17 23878250 23878379 -71394272 - B1_Mm SINE Alu -10 137 1 7 767 204 40 0 0 chr17 23880978 23881003 -71391648 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 7 767 192 40 0 0 chr17 23881466 23881491 -71391160 + (CCCA)n Simple_repeat Simple_repeat 3 27 0 7 767 200 257 26 26 chr17 23883095 23883171 -71389480 + G-rich Low_complexity Low_complexity 3 78 0 7 767 239 303 60 10 chr17 23884111 23884211 -71388440 - MIRb SINE MIR -115 153 49 7 767 393 179 0 0 chr17 23884305 23884389 -71388262 + CT-rich Low_complexity Low_complexity 2 85 0 7 767 1119 89 0 7 chr17 23884389 23884536 -71388115 - B1_Mus2 SINE Alu 0 147 2 7 767 628 213 28 7 chr17 23884559 23884701 -71387950 - B1_Mur1 SINE Alu 0 149 5 7 767 216 0 0 0 chr17 23885022 23885046 -71387605 + (TG)n Simple_repeat Simple_repeat 2 25 0 7 767 336 111 348 18 chr17 23885497 23885609 -71387042 - B2_Mm2 SINE B2 0 195 47 7 767 851 105 165 32 chr17 23885656 23885814 -71386837 - B2_Mm1t SINE B2 -14 179 1 7 767 439 277 62 62 chr17 23887734 23887911 -71384740 + MLT1E1A LTR MaLR 33 209 -471 7 767 426 289 9 17 chr17 23887918 23888034 -71384617 + PB1 SINE Alu 4 118 -9 7 767 367 274 57 0 chr17 23888043 23888149 -71384502 - B1F SINE Alu -18 131 20 7 767 307 20 80 0 chr17 23888173 23888223 -71384428 + (CAAAAA)n Simple_repeat Simple_repeat 1 54 0 7 767 335 321 42 42 chr17 23888308 23888474 -71384177 + MLT1E1A LTR MaLR 476 641 -12 7 767 744 176 26 66 chr17 23888985 23889137 -71383514 + B1_Mus1 SINE Alu 2 147 -1 7 767 493 235 168 0 chr17 23889168 23889287 -71383364 - B4A SINE B4 -151 141 3 7 767 1038 111 27 20 chr17 23890871 23891018 -71381633 + B1_Mur3 SINE Alu 1 148 -1 7 767 270 265 0 88 chr17 23891075 23891166 -71381485 - B1F SINE Alu 0 149 67 7 767 1167 55 14 0 chr17 23891207 23891352 -71381299 - B1_Mus2 SINE Alu 0 147 1 7 767 271 307 98 10 chr17 23891478 23891580 -71381071 - MLT1F LTR MaLR -81 467 357 7 767 423 250 0 0 chr17 23891658 23891738 -71380913 - ID4_ SINE ID -3 80 1 7 767 588 220 0 25 chr17 23891828 23891949 -71380702 - PB1D9 SINE Alu 0 120 3 7 767 1470 88 0 5 chr17 23891956 23892151 -71380500 - B2_Mm2 SINE B2 -1 194 1 7 767 899 139 0 0 chr17 23892156 23892293 -71380358 - B1_Mus1 SINE Alu -1 147 11 7 767 370 243 83 103 chr17 23892293 23892307 -71380344 - B4A SINE B4 -63 224 77 7 767 267 31 0 0 chr17 23892622 23892654 -71379997 + (TTC)n Simple_repeat Simple_repeat 2 33 0 7 767 2224 164 53 0 chr17 23894311 23894670 -71377981 + ORR1C1 LTR MaLR 1 378 0 7 767 524 182 160 49 chr17 23894671 23894815 -71377836 + ORR1C1-int LTR MaLR 3 162 -1347 7 767 872 187 25 192 chr17 23895071 23895115 -71377536 + B3 SINE B2 2 42 -174 7 767 1233 41 0 20 chr17 23895115 23895264 -71377387 + B1_Mus2 SINE Alu 2 147 0 7 767 872 187 25 192 chr17 23895264 23895464 -71377187 + B3 SINE B2 43 205 -11 7 767 302 354 140 16 chr17 23895505 23895755 -71376896 + HAL1 LINE L1 1511 1791 -716 7 767 299 356 58 64 chr17 23895996 23896152 -71376499 + RSINE1 SINE B4 11 165 0 7 767 337 186 0 67 chr17 23896154 23896229 -71376422 + PB1D9 SINE Alu 50 119 -1 7 767 1077 109 58 27 chr17 23896229 23896417 -71376234 + B2_Mm2 SINE B2 2 195 0 7 767 1265 48 0 0 chr17 23896886 23897033 -71375618 + B1_Mus2 SINE Alu 1 147 0 7 767 578 206 20 0 chr17 23901137 23901239 -71371412 + PB1D9 SINE Alu 12 115 -5 7 767 615 172 102 22 chr17 23901278 23901415 -71371236 - B1_Mur2 SINE Alu 0 149 2 7 767 418 227 31 85 chr17 23901440 23901570 -71371081 - B3A SINE B2 -73 125 3 7 767 205 290 16 0 chr17 23901585 23901647 -71371004 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 7 767 253 211 17 34 chr17 23901653 23901712 -71370939 - B3A SINE B2 -140 58 1 7 767 186 43 0 0 chr17 23902691 23902714 -71369937 + (CAA)n Simple_repeat Simple_repeat 2 24 0 7 767 897 152 0 0 chr17 23902742 23902880 -71369771 + B1_Mur3 SINE Alu 5 142 -7 7 767 262 267 26 13 chr17 23903167 23903243 -71369408 + B4 SINE B4 1 77 -215 7 767 783 164 60 0 chr17 23903257 23903391 -71369260 - B1_Mur2 SINE Alu -7 142 1 7 767 1187 62 7 0 chr17 23903401 23903547 -71369104 - B1_Mm SINE Alu 0 147 1 7 767 324 213 65 26 chr17 23903603 23903680 -71368971 + B1_Mus1 SINE Alu 36 115 -33 7 767 1482 78 5 0 chr17 23903689 23903881 -71368770 + B2_Mm1a SINE B2 1 193 0 7 767 227 83 0 77 chr17 23903883 23903922 -71368729 + B1_Mus1 SINE Alu 102 137 -11 7 767 584 295 95 34 chr17 23904245 23904508 -71368143 - B4A SINE B4 -11 281 3 7 767 210 378 52 65 chr17 23904553 23904620 -71368031 - RSINE1 SINE B4 -2 163 104 7 767 1557 32 38 0 chr17 23904620 23904806 -71367845 - B2_Mm1a SINE B2 0 193 1 7 767 210 378 52 65 chr17 23904806 23904891 -71367760 - RSINE1 SINE B4 -62 103 13 7 767 474 205 20 82 chr17 23904919 23905081 -71367570 - B1F SINE Alu 0 149 10 7 767 1316 67 0 0 chr17 23905234 23905398 -71367253 + B2_Mm2 SINE B2 1 164 -31 7 767 843 276 81 8 chr17 23905767 23906015 -71366636 + B4A SINE B4 8 273 -19 7 767 547 254 43 0 chr17 23906167 23906305 -71366346 + B1_Mur1 SINE Alu 4 147 -2 7 767 518 275 16 8 chr17 23906378 23906499 -71366152 + PB1 SINE Alu 1 122 -5 7 767 28 0 0 0 chr17 23906499 23906527 -71366124 + AT_rich Low_complexity Low_complexity 1 28 0 7 767 222 62 0 0 chr17 23906763 23906795 -71365856 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 7 767 1142 65 0 0 chr17 23906795 23906934 -71365717 - B1_Mus1 SINE Alu -8 140 2 7 767 604 197 118 22 chr17 23907179 23907314 -71365337 + B1_Mur3 SINE Alu 1 148 -1 7 767 192 125 0 0 chr17 23907819 23907851 -71364800 + (GAATG)n Simple_repeat Simple_repeat 1 32 0 7 767 21 0 0 0 chr17 23908540 23908561 -71364090 + GC_rich Low_complexity Low_complexity 1 21 0 7 767 237 257 0 39 chr17 23908927 23908971 -71363680 + polypyrimidine Low_complexity Low_complexity 37 77 0 7 767 897 135 12 75 chr17 23908971 23909131 -71363520 - B1_Mur4 SINE Alu 0 150 1 7 767 237 257 0 39 chr17 23909131 23909163 -71363488 + polypyrimidine Low_complexity Low_complexity 5 36 0 7 767 939 221 39 25 chr17 23909185 23909389 -71363262 - B3 SINE B2 0 216 10 7 767 1555 58 5 0 chr17 23909398 23909589 -71363062 - B2_Mm1a SINE B2 0 193 2 7 767 465 257 0 19 chr17 23909733 23909836 -71362815 + ID_B1 SINE B4 123 223 -1 7 767 376 228 165 0 chr17 23909943 23910070 -71362581 + B1F2 SINE Alu 1 148 -1 7 767 1040 147 179 0 chr17 23910097 23910287 -71362364 - URR1B DNA MER1_type -1 224 1 7 767 448 297 64 21 chr17 23910293 23910434 -71362217 + B3 SINE B2 62 208 -8 7 767 252 276 132 0 chr17 23910583 23910659 -71361992 + PB1 SINE Alu 2 87 -40 7 767 282 276 32 33 chr17 23910647 23910697 -71361954 + B4A SINE B4 44 149 -143 7 767 318 154 37 0 chr17 23910697 23910756 -71361895 + B1F2 SINE Alu 5 65 -83 7 767 387 0 0 0 chr17 23911478 23911521 -71361130 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 767 692 274 50 17 chr17 23911524 23911730 -71360921 - B4A SINE B4 -4 288 77 7 767 1313 14 0 0 chr17 23911764 23911909 -71360742 + B1_Mm SINE Alu 3 147 0 7 767 969 78 28 14 chr17 23911919 23912063 -71360588 - B2_Mm2 SINE B2 -14 181 36 7 767 2311 108 52 16 chr17 23912084 23912471 -71360180 - Lx LINE L1 -2 6652 6252 7 767 237 246 16 16 chr17 23912476 23912538 -71360113 - B4A SINE B4 -230 62 1 7 767 222 208 42 0 chr17 23912554 23912602 -71360049 - B1F SINE Alu -98 51 2 7 767 764 232 48 32 chr17 23912782 23912969 -71359682 + B3 SINE B2 23 212 -4 7 767 279 0 0 0 chr17 23913234 23913265 -71359386 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 767 428 146 201 2 chr17 23913742 23913859 -71358792 + B1_Mus1 SINE Alu 1 147 0 7 767 225 256 51 13 chr17 23917302 23917381 -71355270 + ID4 SINE ID 2 83 0 7 767 323 259 30 0 chr17 23917395 23917419 -71355232 + ORR1B1-int LTR MaLR 620 647 -862 7 767 1129 82 0 0 chr17 23917419 23917566 -71355085 + B1_Mus1 SINE Alu 2 148 0 7 767 307 253 11 78 chr17 23917620 23917710 -71354941 + MT2B LTR ERVL 156 239 -362 7 767 403 247 22 0 chr17 23917640 23917729 -71354922 + B1_Mus1 SINE Alu 13 103 -45 7 767 558 0 0 0 chr17 23917735 23917797 -71354854 + (TG)n Simple_repeat Simple_repeat 2 63 0 8 767 658 281 99 27 chr17 23917799 23918022 -71354629 + B4A SINE B4 13 251 -41 8 767 1031 49 153 0 chr17 23918274 23918418 -71354233 + B2_Mm2 SINE B2 15 180 -15 8 767 1105 40 13 13 chr17 23918418 23918569 -71354082 + (GAAA)n Simple_repeat Simple_repeat 2 152 0 8 767 671 233 128 15 chr17 23918864 23919060 -71353591 + ID_B1 SINE B4 2 219 -5 8 767 1379 62 28 0 chr17 23919067 23919243 -71353408 + B2_Mm2 SINE B2 1 181 -14 8 767 1057 83 14 0 chr17 23919259 23919403 -71353248 - B1_Mus1 SINE Alu -1 147 2 8 767 24 32 0 0 chr17 23919404 23919435 -71353216 + AT_rich Low_complexity Low_complexity 1 31 0 8 767 183 42 0 0 chr17 23919514 23919538 -71353113 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 8 767 809 230 10 25 chr17 23919651 23919847 -71352804 - B3A SINE B2 -1 197 5 8 767 1275 41 0 0 chr17 23919955 23920101 -71352550 - B1_Mus2 SINE Alu 0 147 2 8 767 429 139 41 14 chr17 23920163 23920236 -71352415 + PB1D10 SINE Alu 42 116 -1 8 767 207 100 0 0 chr17 23920236 23920266 -71352385 + (CATA)n Simple_repeat Simple_repeat 3 32 0 8 767 948 278 19 34 chr17 23920320 23920588 -71352063 + B4A SINE B4 11 274 -18 8 767 465 19 0 0 chr17 23920589 23920643 -71352008 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 767 462 179 86 43 chr17 23920826 23920966 -71351685 + B1_Mur4 SINE Alu 5 150 0 8 767 418 256 44 0 chr17 23921007 23921097 -71351554 + RSINE1 SINE B4 11 104 -61 8 767 678 211 62 36 chr17 23921237 23921429 -71351222 + B3A SINE B2 2 198 0 8 767 1186 51 0 0 chr17 23921435 23921573 -71351078 + B1_Mus2 SINE Alu 1 138 -9 8 767 605 268 57 125 chr17 23921679 23921767 -71350884 + MLT1D LTR MaLR 256 332 -173 8 767 1171 45 0 0 chr17 23921767 23921900 -71350751 + B1_Mus1 SINE Alu 3 135 -13 8 767 219 36 0 0 chr17 23921900 23921928 -71350723 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 8 767 605 268 57 125 chr17 23921928 23922102 -71350549 + MLT1D LTR MaLR 333 500 -5 8 767 310 213 30 60 chr17 23923318 23923418 -71349233 + B3A SINE B2 102 198 0 8 767 27 87 0 0 chr17 23923937 23924006 -71348645 + AT_rich Low_complexity Low_complexity 1 69 0 8 767 492 285 20 40 chr17 23924092 23924242 -71348409 + RSINE1 SINE B4 3 149 -16 8 767 535 211 141 90 chr17 23924240 23924417 -71348234 + B3 SINE B2 6 191 -25 8 767 21 0 0 0 chr17 23924464 23924485 -71348166 + AT_rich Low_complexity Low_complexity 1 21 0 8 767 234 297 189 0 chr17 23924495 23924569 -71348082 + PB1D10 SINE Alu 8 95 -22 8 767 247 257 157 0 chr17 23924602 23924672 -71347979 - PB1D7 SINE Alu -1 119 39 8 767 432 226 81 169 chr17 23925054 23925085 -71347566 + ORR1D2 LTR MaLR 1 31 -339 8 767 1120 81 0 0 chr17 23925085 23925221 -71347430 + B1_Mus2 SINE Alu 2 137 -10 8 767 558 0 0 0 chr17 23925221 23925283 -71347368 + (CAAAA)n Simple_repeat Simple_repeat 2 63 0 8 767 432 226 81 169 chr17 23925283 23925410 -71347241 + ORR1D2 LTR MaLR 32 145 -225 8 767 657 148 18 9 chr17 23925426 23925535 -71347116 - PB1D9 SINE Alu -9 111 2 8 767 969 75 7 22 chr17 23925566 23925703 -71346948 - B1_Mm SINE Alu 0 147 13 8 767 498 245 108 18 chr17 23925715 23925914 -71346737 + BGLII_B LTR ERVK 1 217 -475 8 767 330 301 87 0 chr17 23925885 23925988 -71346663 - ORR1D2 LTR MaLR -87 283 172 8 767 841 211 48 5 chr17 23925989 23926175 -71346476 - BGLII_B LTR ERVK 0 441 248 8 767 213 288 0 17 chr17 23926214 23926274 -71346377 + ID_B1 SINE B4 96 154 -70 8 767 798 67 0 0 chr17 23926274 23926379 -71346272 + B1_Mus2 SINE Alu 38 142 -5 8 767 180 0 0 0 chr17 23926383 23926403 -71346248 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 8 767 198 91 0 0 chr17 23926499 23926532 -71346119 + (T)n Simple_repeat Simple_repeat 1 33 0 8 767 741 257 85 77 chr17 23926559 23926960 -71345691 - RMER10A LTR ERVL -18 424 21 8 767 347 290 87 16 chr17 23926947 23927073 -71345578 + ID_B1 SINE B4 90 224 0 8 767 411 229 75 125 chr17 23927298 23927418 -71345233 + B1F SINE Alu 7 124 -25 8 767 481 306 78 54 chr17 23927956 23928160 -71344491 - MER70B LTR ERVL -250 328 120 8 767 416 253 75 31 chr17 23928255 23928414 -71344237 - B3A SINE B2 0 195 30 8 767 796 156 47 0 chr17 23928438 23928566 -71344085 - B1_Mur1 SINE Alu -7 142 9 8 767 292 253 96 112 chr17 23928471 23928649 -71344002 - MT2B LTR ERVL -338 263 89 8 767 294 29 0 0 chr17 23928670 23928705 -71343946 + (CTTG)n Simple_repeat Simple_repeat 1 35 0 8 767 207 0 0 0 chr17 23928713 23928736 -71343915 + (T)n Simple_repeat Simple_repeat 1 23 0 8 767 861 152 58 0 chr17 23928746 23928884 -71343767 - B1_Mur4 SINE Alu -4 146 1 8 767 913 117 0 35 chr17 23928886 23929028 -71343623 - B1_Mur4 SINE Alu 0 150 14 8 767 365 234 55 116 chr17 23928918 23929082 -71343569 - MT2B LTR ERVL -323 278 125 8 767 479 264 103 33 chr17 23929176 23929360 -71343291 + RMER15 LTR ERVL 362 558 -17 8 767 247 282 0 101 chr17 23929555 23929634 -71343017 - B4 SINE B4 -6 286 216 8 767 671 213 24 0 chr17 23929674 23929801 -71342850 - RSINE1 SINE B4 -33 132 3 8 767 825 277 53 26 chr17 23929801 23930021 -71342630 - B4 SINE B4 -66 226 1 8 767 463 284 23 39 chr17 23930493 23930621 -71342030 - RSINE1 SINE B4 -4 161 36 8 767 271 257 67 0 chr17 23930760 23930865 -71341786 + L1M3 LINE L1 5324 5435 -745 8 767 735 229 116 11 chr17 23930881 23931062 -71341589 + B3 SINE B2 10 209 -7 8 767 1301 94 14 103 chr17 23931226 23931269 -71341382 + B2_Mm2 SINE B2 1 28 -167 8 767 1243 105 10 86 chr17 23931269 23931478 -71341173 + B2_Mm1t SINE B2 1 193 0 8 767 1301 94 14 103 chr17 23931478 23931648 -71341003 + B2_Mm2 SINE B2 29 195 0 8 767 592 173 1 48 chr17 23931707 23931829 -71340822 + PB1D7 SINE Alu 1 119 -1 8 767 235 289 28 37 chr17 23931891 23931999 -71340652 + L1MC LINE L1 5422 5528 -2354 8 767 216 67 0 0 chr17 23932100 23932130 -71340521 + (T)n Simple_repeat Simple_repeat 1 30 0 8 767 1251 34 0 7 chr17 23932130 23932278 -71340373 - B1_Mus2 SINE Alu 0 147 1 8 767 1139 97 0 0 chr17 23932283 23932427 -71340224 - B1_Mus1 SINE Alu -2 146 3 8 767 261 254 34 0 chr17 23932456 23932515 -71340136 - ID4 SINE ID 0 83 23 8 767 254 330 26 17 chr17 23932809 23932926 -71339725 - L1MC4 LINE L1 -1432 6610 6493 8 767 1216 67 84 0 chr17 23932926 23933104 -71339547 + B2_Mm2 SINE B2 3 195 0 8 767 225 192 244 0 chr17 23933118 23933196 -71339455 - L1MC4 LINE L1 -1527 6515 6419 8 767 1112 54 74 0 chr17 23933235 23933383 -71339268 - B2_Mm2 SINE B2 -36 159 1 8 767 489 256 44 22 chr17 23933539 23933675 -71338976 - B1F SINE Alu 0 149 11 8 767 231 36 0 0 chr17 23933701 23933729 -71338922 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 8 767 21 36 0 0 chr17 23933739 23933767 -71338884 + AT_rich Low_complexity Low_complexity 1 28 0 8 767 398 106 0 5 chr17 23933768 23933833 -71338818 - B2_Mm2 SINE B2 -107 109 47 8 767 1332 85 11 0 chr17 23933865 23934041 -71338610 - B2_Mm1a SINE B2 -14 179 2 8 767 355 297 98 33 chr17 23934051 23934173 -71338478 - B1F SINE Alu -6 143 14 8 767 230 206 135 14 chr17 23934207 23934281 -71338370 - ORR1B1 LTR MaLR -307 87 5 8 767 445 202 65 83 chr17 23934354 23934462 -71338189 + PB1D7 SINE Alu 15 120 0 8 767 271 322 8 94 chr17 23934629 23934756 -71337895 - ID_B1 SINE B4 0 224 109 8 767 397 332 20 3 chr17 23934647 23934773 -71337878 - B1F2 SINE Alu -11 138 12 8 767 524 183 115 0 chr17 23935159 23935263 -71337388 + B1_Mur1 SINE Alu 34 149 0 8 767 966 260 15 10 chr17 23935263 23935465 -71337186 + B4 SINE B4 17 219 -73 8 767 387 253 38 0 chr17 23935516 23935595 -71337056 + RSINE1 SINE B4 62 143 -22 8 767 543 233 93 0 chr17 23935641 23935770 -71336881 - B1_Mur1 SINE Alu -7 142 2 8 767 482 322 107 25 chr17 23935906 23936148 -71336503 - RMER15 LTR ERVL -18 557 296 8 767 1069 16 8 0 chr17 23936337 23936466 -71336185 + B1_Mus2 SINE Alu 18 147 0 8 767 778 206 6 33 chr17 23936477 23936658 -71335993 - MurERV4-int LTR ERVK -5054 206 31 8 767 1094 83 14 0 chr17 23936684 23936829 -71335822 - B1_Mm SINE Alu 0 147 1 8 767 2208 181 72 25 chr17 23936877 23936988 -71335663 - RMER4A LTR ERVK -2 464 352 8 767 1593 37 0 11 chr17 23936988 23937177 -71335474 - B2_Mm1a SINE B2 -6 187 1 8 767 2208 181 72 25 chr17 23937177 23937508 -71335143 - RMER4A LTR ERVK -115 351 1 8 767 275 324 0 14 chr17 23937587 23937659 -71334992 - RSINE1 SINE B4 -21 144 74 8 767 563 202 4 0 chr17 23937720 23937831 -71334820 - B1F1 SINE Alu -7 113 1 8 767 1240 74 85 0 chr17 23937985 23938161 -71334490 + B2_Mm1t SINE B2 2 192 -1 8 767 474 82 0 0 chr17 23938499 23938572 -71334079 - L1_Mus1 LINE L1 0 6567 6495 8 767 464 279 90 28 chr17 23938634 23938837 -71333814 + B3A SINE B2 3 215 -1 8 767 4325 17 6 0 chr17 23938896 23939375 -71333276 - LTRIS_Mm LTR ERV1 0 482 1 8 767 205 106 20 60 chr17 23940226 23940276 -71332375 + (CGG)n Simple_repeat Simple_repeat 2 49 0 8 767 23 0 0 0 chr17 23940566 23940589 -71332062 + GC_rich Low_complexity Low_complexity 1 23 0 8 767 597 218 113 0 chr17 23941118 23941251 -71331400 - B1_Mur1 SINE Alu -1 148 1 8 767 684 21 100 40 chr17 23941274 23941374 -71331277 - B1_Mus2 SINE Alu -1 146 41 8 767 697 164 26 0 chr17 23942442 23942558 -71330093 - B1_Mur3 SINE Alu -21 128 10 8 767 624 169 72 12 chr17 23945579 23945724 -71326927 - B1_Mur2 SINE Alu 0 149 1 9 767 641 229 83 12 chr17 23945778 23945946 -71326705 - B3 SINE B2 -17 199 20 9 767 1027 45 0 36 chr17 23945972 23946111 -71326540 - B1_Mus2 SINE Alu 0 147 14 9 767 451 168 107 74 chr17 23946002 23946124 -71326527 - MT2B LTR ERVL -323 278 153 9 767 633 175 35 9 chr17 23946144 23946259 -71326392 + PB1D9 SINE Alu 1 118 -2 9 767 686 213 22 7 chr17 23946267 23946404 -71326247 + B1_Mur2 SINE Alu 11 149 0 9 767 796 171 0 15 chr17 23946461 23946592 -71326059 - B1_Mus1 SINE Alu -18 130 2 9 767 429 200 372 54 chr17 23946723 23946871 -71325780 - B2_Mm2 SINE B2 -3 195 1 9 767 497 216 76 35 chr17 23947469 23947613 -71325038 - B1_Mur4 SINE Alu 0 150 1 9 767 672 48 0 0 chr17 23948112 23948196 -71324455 + (GA)n Simple_repeat Simple_repeat 2 85 0 9 767 24 53 0 0 chr17 23948346 23948384 -71324267 + AT_rich Low_complexity Low_complexity 1 38 0 9 767 450 305 53 0 chr17 23948384 23948515 -71324136 - B1_Mur3 SINE Alu -6 143 6 9 767 302 222 200 10 chr17 23948742 23948842 -71323809 - MIRm SINE MIR -4 272 154 9 767 449 173 54 71 chr17 23948753 23948865 -71323786 - L2c LINE L2 -16 3371 3262 9 767 30 0 0 0 chr17 23948879 23948909 -71323742 + AT_rich Low_complexity Low_complexity 1 30 0 9 767 204 237 0 38 chr17 23949009 23949088 -71323563 - L2c LINE L2 -228 3159 3084 9 767 202 211 0 0 chr17 23949227 23949279 -71323372 + T-rich Low_complexity Low_complexity 1 52 0 9 767 475 106 0 66 chr17 23950501 23950592 -71322059 - L1Md_F2 LINE L1 0 6582 6498 9 767 260 293 183 61 chr17 23950953 23951084 -71321567 - RSINE1 SINE B4 0 165 19 9 767 726 234 14 14 chr17 23951099 23951246 -71321405 - B1_Mur2 SINE Alu -1 148 2 9 767 313 306 12 12 chr17 23951809 23951895 -71320756 - RSINE1 SINE B4 -8 157 72 9 767 192 222 0 0 chr17 23958519 23958591 -71314060 + CT-rich Low_complexity Low_complexity 2 73 0 9 767 506 241 82 8 chr17 23958828 23958962 -71313689 + L3b LINE CR1 141 284 -198 9 767 220 355 87 48 chr17 23958965 23959172 -71313479 - L3b LINE CR1 -24 458 244 9 767 247 298 130 51 chr17 23959201 23959378 -71313273 - LTR81B LTR ERV1? -768 625 435 9 767 702 125 0 0 chr17 23959484 23959596 -71313055 + (TCC)n Simple_repeat Simple_repeat 1 112 0 9 767 429 307 164 24 chr17 23959809 23960561 -71312090 + L2c LINE L2 2489 3339 -48 9 767 207 0 0 0 chr17 23961332 23961355 -71311296 + (T)n Simple_repeat Simple_repeat 1 23 0 9 767 276 252 0 68 chr17 23962389 23962471 -71310180 + B1_Mus1 SINE Alu 1 77 -73 9 767 655 251 183 0 chr17 23963098 23963273 -71309378 - B3 SINE B2 -4 212 6 9 767 280 87 98 2 chr17 23963390 23963463 -71309188 - B1_Mus2 SINE Alu -21 128 13 9 767 1024 68 75 8 chr17 23963534 23963668 -71308983 + B1_Mus2 SINE Alu 5 147 0 9 767 315 227 237 0 chr17 23963845 23963942 -71308709 + PB1D9 SINE Alu 1 120 0 9 767 458 220 211 18 chr17 23964104 23964275 -71308376 - B3 SINE B2 -12 204 1 9 767 301 276 79 119 chr17 23964674 23964851 -71307800 + B2_Mm2 SINE B2 3 172 -23 9 767 259 265 19 38 chr17 23966003 23966160 -71306491 + (CCCCG)n Simple_repeat Simple_repeat 1 154 0 9 767 663 202 188 17 chr17 23966361 23966537 -71306114 - B3 SINE B2 -9 207 2 9 767 2173 134 40 140 chr17 23967076 23967177 -71305474 + RLTR23 LTR ERV1 1 100 -330 9 767 180 0 0 0 chr17 23967177 23967197 -71305454 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 9 767 2173 134 40 140 chr17 23967197 23967573 -71305078 + RLTR23 LTR ERV1 101 430 0 9 767 221 246 86 14 chr17 23967953 23968023 -71304628 - B1_Mus2 SINE Alu -24 123 49 9 767 659 200 81 52 chr17 23968102 23968276 -71304375 - B3A SINE B2 -3 195 17 9 767 311 290 74 116 chr17 23968255 23968376 -71304275 - PB1D10 SINE Alu 0 127 12 9 767 268 348 0 53 chr17 23968295 23968389 -71304262 - ID_B1 SINE B4 -56 168 80 9 767 486 207 0 0 chr17 23968430 23968512 -71304139 - B1F1 SINE Alu 0 149 68 9 767 499 317 86 40 chr17 23968566 23968740 -71303911 + B3A SINE B2 1 182 -16 9 767 685 179 31 31 chr17 23968768 23968895 -71303756 + B1_Mur1 SINE Alu 14 140 -9 9 767 903 266 194 23 chr17 23970266 23970612 -71302039 - MLT1E3 LTR MaLR -3 621 217 9 767 226 224 148 34 chr17 23971415 23971503 -71301148 + ORR1D-int LTR MaLR 1212 1309 -61 9 767 1632 27 5 0 chr17 23974660 23974847 -71297804 - B2_Mm1t SINE B2 -4 189 2 9 767 290 263 126 0 chr17 23975128 23975223 -71297428 + PB1D9 SINE Alu 7 113 -7 9 767 529 297 97 0 chr17 23975236 23975401 -71297250 + B3A SINE B2 1 181 -17 9 767 291 263 0 0 chr17 23975414 23975532 -71297119 + (CA)n Simple_repeat Simple_repeat 1 118 0 9 767 1228 109 0 0 chr17 23975581 23975756 -71296895 - B2_Mm2 SINE B2 -19 176 2 9 767 411 296 108 48 chr17 23975826 23976178 -71296473 + L1MB7 LINE L1 3322 3694 -2452 9 767 1244 54 0 0 chr17 23976188 23976335 -71296316 + B1_Mm SINE Alu 1 147 0 9 767 853 140 27 27 chr17 23976380 23976527 -71296124 + B1_Mm SINE Alu 1 147 0 9 767 397 227 92 15 chr17 23976751 23976881 -71295770 + B4A SINE B4 86 225 -67 9 767 1337 101 16 21 chr17 23976894 23977086 -71295565 + B2_Mm2 SINE B2 1 191 -4 9 767 709 285 0 0 chr17 23977104 23977255 -71295396 + RSINE1 SINE B4 2 152 -13 9 767 351 293 0 0 chr17 23977342 23977417 -71295234 + B4A SINE B4 217 291 -1 9 767 370 237 81 7 chr17 23977557 23977693 -71294958 + L1MB7 LINE L1 4014 4159 -1981 9 767 490 281 107 20 chr17 23977693 23977842 -71294809 + RSINE1 SINE B4 3 164 -1 9 767 183 122 61 0 chr17 23977876 23977925 -71294726 + (CA)n Simple_repeat Simple_repeat 1 52 0 9 767 263 255 105 25 chr17 23978027 23978205 -71294446 + L1MB7 LINE L1 5849 6037 -137 9 767 374 248 50 138 chr17 23978495 23978654 -71293997 - ID_B1 SINE B4 0 224 80 9 767 331 125 152 30 chr17 23978658 23978724 -71293927 - B1_Mus2 SINE Alu 0 147 74 9 767 251 232 203 0 chr17 23978774 23978843 -71293808 + 5S rRNA rRNA 1 83 -38 9 767 1222 61 0 0 chr17 23979708 23979856 -71292795 - B1_Mus1 SINE Alu 0 148 1 9 767 827 244 21 53 chr17 23979906 23980096 -71292555 + ID_B1 SINE B4 1 184 -40 9 767 555 16 0 0 chr17 23980103 23980167 -71292484 + (CCAA)n Simple_repeat Simple_repeat 2 65 0 9 767 180 0 0 0 chr17 23981065 23981085 -71291566 + (CAG)n Simple_repeat Simple_repeat 1 20 0 9 767 376 280 41 25 chr17 23981611 23981732 -71290919 - MER77 LTR ERVL -3 604 482 9 767 219 286 18 18 chr17 23981873 23981930 -71290721 + ID4 SINE ID 16 72 -11 9 767 351 319 20 47 chr17 23981943 23982091 -71290560 + MTD LTR MaLR 1 144 -275 9 767 266 137 118 0 chr17 23982095 23982146 -71290505 - MTD LTR MaLR 0 419 363 9 767 334 204 0 0 chr17 23982144 23982198 -71290453 + B1_Mur2 SINE Alu 54 107 -42 9 767 345 210 217 24 chr17 23982188 23982271 -71290380 - B1_Mur2 SINE Alu -42 107 9 9 767 1133 49 28 0 chr17 23982273 23982415 -71290236 + B1_Mm SINE Alu 2 147 0 9 767 22 35 0 0 chr17 23982453 23982482 -71290169 + AT_rich Low_complexity Low_complexity 1 29 0 9 767 3092 86 2 7 chr17 23982517 23982928 -71289723 + L1Md_F2 LINE L1 6168 6576 -6 9 767 1279 100 5 22 chr17 23982928 23983112 -71289539 - B2_Mm2 SINE B2 -14 181 1 9 767 1046 235 5 0 chr17 23983139 23983343 -71289308 + B3 SINE B2 6 210 -6 9 767 737 197 88 0 chr17 23983368 23983505 -71289146 - B1_Mur3 SINE Alu 0 149 1 9 767 249 139 0 0 chr17 23983514 23983557 -71289094 + (TCC)n Simple_repeat Simple_repeat 3 45 0 9 767 767 147 98 23 chr17 23983558 23983690 -71288961 - B1_Mus2 SINE Alu -5 142 1 9 767 564 15 0 0 chr17 23983710 23983775 -71288876 + (TG)n Simple_repeat Simple_repeat 2 66 0 9 767 622 300 20 0 chr17 23983777 23983927 -71288724 - B3A SINE B2 -45 153 1 9 767 513 265 40 33 chr17 23983948 23984100 -71288551 - RSINE1 SINE B4 0 165 13 9 767 495 48 0 0 chr17 23984107 23984169 -71288482 + (TC)n Simple_repeat Simple_repeat 2 63 0 9 767 1679 234 42 153 chr17 23984184 23984626 -71288025 - RLTR18B LTR ERVK -5 507 109 9 767 2495 144 197 42 chr17 23984626 23984975 -71287676 + RMER19C LTR ERVK 1 416 -195 9 767 228 35 0 0 chr17 23984975 23985004 -71287647 + (TATTG)n Simple_repeat Simple_repeat 2 30 0 9 767 2495 144 197 42 chr17 23985004 23985183 -71287468 + RMER19C LTR ERVK 417 611 0 9 767 1679 234 42 153 chr17 23985183 23985216 -71287435 - RLTR18B LTR ERVK -404 108 91 9 767 2573 133 26 3 chr17 23985216 23985601 -71287050 + ORR1B1 LTR MaLR 1 394 0 9 767 1679 234 42 153 chr17 23985601 23985694 -71286957 - RLTR18B LTR ERVK -422 90 1 9 767 328 186 330 0 chr17 23985895 23985992 -71286659 - B1_Mus1 SINE Alu -19 129 1 9 768 1767 215 200 20 chr17 23986322 23986773 -71285878 + MT2A LTR ERVL 2 533 0 9 768 876 274 103 0 chr17 23986775 23986979 -71285672 + B4A SINE B4 66 290 -2 9 768 1052 241 5 0 chr17 23987077 23987284 -71285367 + B3 SINE B2 9 216 0 9 768 203 283 33 0 chr17 23987726 23987786 -71284865 + CT-rich Low_complexity Low_complexity 5 66 0 9 768 328 301 203 21 chr17 23987792 23987979 -71284672 - RMER15 LTR ERVL 0 575 355 9 768 279 0 0 0 chr17 23988105 23988136 -71284515 + (TG)n Simple_repeat Simple_repeat 1 31 0 9 768 276 125 0 0 chr17 23988172 23988204 -71284447 + (TTCC)n Simple_repeat Simple_repeat 3 34 0 9 768 1792 5 0 0 chr17 23988204 23988397 -71284254 - B2_Mm1a SINE B2 0 193 1 9 768 276 125 0 0 chr17 23988397 23988412 -71284239 + (TTCC)n Simple_repeat Simple_repeat 4 18 0 9 768 895 219 49 0 chr17 23988421 23988626 -71284025 - B3 SINE B2 0 216 2 9 768 444 266 111 16 chr17 23988637 23988763 -71283888 - B4 SINE B4 -69 223 86 1 768 1514 145 60 106 chr17 23988772 23988946 -71283705 - ORR1D1 LTR MaLR -58 316 129 1 768 3886 119 28 28 chr17 23988946 23989527 -71283124 + Lx LINE L1 6049 6639 -15 1 768 766 46 284 0 chr17 23989527 23989636 -71283015 + B1_Mus2 SINE Alu 2 141 -6 1 768 521 42 0 14 chr17 23989638 23989711 -71282940 + (TAAA)n Simple_repeat Simple_repeat 1 72 0 1 768 3886 119 28 28 chr17 23989711 23989731 -71282920 + Lx LINE L1 6640 6653 -1 1 768 1514 145 60 106 chr17 23989731 23989887 -71282764 - ORR1D1 LTR MaLR -246 128 1 1 768 720 272 35 35 chr17 23989887 23990070 -71282581 - ID_B1 SINE B4 -40 184 2 1 768 24 0 0 0 chr17 23990078 23990102 -71282549 + AT_rich Low_complexity Low_complexity 1 24 0 1 768 542 215 8 24 chr17 23990996 23991120 -71281531 - ID_B1 SINE B4 0 224 103 1 768 548 301 152 29 chr17 23991693 23991936 -71280715 + B4A SINE B4 7 279 -13 1 768 314 297 18 21 chr17 23992071 23992164 -71280487 - RSINE1 SINE B4 -1 164 83 1 768 558 0 0 0 chr17 23992188 23992250 -71280401 + (TTTA)n Simple_repeat Simple_repeat 2 63 0 1 768 869 139 80 0 chr17 23992277 23992428 -71280223 - B2_Mm2 SINE B2 -31 164 2 1 768 493 300 43 94 chr17 23992428 23992659 -71279992 - B4A SINE B4 -62 230 12 1 768 207 0 0 0 chr17 23994503 23994526 -71278125 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 768 340 224 115 26 chr17 23994584 23994662 -71277989 + B4A SINE B4 2 86 -206 1 768 243 275 93 58 chr17 23994662 23994701 -71277950 + BC1_Mm scRNA scRNA 2 123 -29 1 768 916 134 35 21 chr17 23994701 23994846 -71277805 + B1_Mus2 SINE Alu 1 147 0 1 768 578 314 76 76 chr17 23994843 23995053 -71277598 + B4A SINE B4 82 291 -1 1 768 273 310 0 0 chr17 23995107 23995178 -71277473 + ID4_ SINE ID 2 72 -11 1 768 581 194 0 6 chr17 23995186 23995367 -71277284 + GA-rich Low_complexity Low_complexity 1 180 0 1 768 549 0 0 0 chr17 23995406 23995467 -71277184 + (GA)n Simple_repeat Simple_repeat 2 62 0 1 768 1166 49 35 0 chr17 23998259 23998402 -71274249 + B1_Mus1 SINE Alu 1 148 0 1 768 544 310 30 54 chr17 23998696 23998863 -71273788 + RSINE1 SINE B4 3 165 0 1 768 682 116 40 17 chr17 23998872 23999047 -71273604 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 768 430 139 51 7 chr17 23999072 23999210 -71273441 + (CA)n Simple_repeat Simple_repeat 2 145 0 1 768 181 174 11 65 chr17 23999263 23999355 -71273296 + (CA)n Simple_repeat Simple_repeat 1 87 0 1 768 265 136 30 0 chr17 23999444 23999510 -71273141 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 768 203 283 123 66 chr17 23999571 23999677 -71272974 + L2a LINE L2 3065 3176 -250 1 768 761 57 9 28 chr17 23999752 23999764 -71272887 - B1_Mus2 SINE Alu -1 146 137 1 768 648 0 0 0 chr17 23999764 23999836 -71272815 + (TTTTG)n Simple_repeat Simple_repeat 2 73 0 1 768 761 57 9 28 chr17 23999836 23999931 -71272720 - B1_Mus2 SINE Alu -11 136 41 1 768 336 127 0 137 chr17 23999873 23999946 -71272705 - RLTR25A LTR ERVK -531 572 510 1 768 679 189 92 23 chr17 24000575 24000705 -71271946 - B1_Mur2 SINE Alu -6 143 5 1 768 374 183 19 123 chr17 24000711 24000817 -71271834 + MTEa LTR MaLR 3 97 -282 2 768 320 324 105 44 chr17 24000867 24000904 -71271747 + MTEa LTR MaLR 59 100 -259 2 768 1872 191 48 3 chr17 24000904 24001261 -71271390 + ORR1D1 LTR MaLR 1 373 -1 3 768 320 324 105 44 chr17 24001261 24001404 -71271247 + MTEa LTR MaLR 101 250 -109 2 768 305 288 12 24 chr17 24001623 24001705 -71270946 - RSINE1 SINE B4 -3 162 82 4 768 587 193 48 6 chr17 24001754 24001904 -71270747 + RMER1B Other Other 790 902 -164 5 768 867 148 11 61 chr17 24002271 24002451 -71270200 + RMER1B Other Other 893 1063 -3 5 768 24 32 0 0 chr17 24002504 24002535 -71270116 + AT_rich Low_complexity Low_complexity 1 31 0 6 768 744 171 23 6 chr17 24002559 24002736 -71269915 + (TATG)n Simple_repeat Simple_repeat 1 180 0 7 768 676 266 45 28 chr17 24002764 24002942 -71269709 - B3A SINE B2 -16 182 2 8 768 560 229 50 19 chr17 24003190 24003378 -71269273 + L1MA5 LINE L1 5716 5908 -389 9 768 265 308 27 20 chr17 24003380 24003495 -71269156 + ID4_ SINE ID 2 119 -33 1 768 246 276 80 11 chr17 24003664 24003752 -71268899 + L1MA5 LINE L1 6150 6243 -57 9 768 201 39 0 0 chr17 24003854 24003880 -71268771 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 768 729 227 0 7 chr17 24003906 24004048 -71268603 + B1_Mur2 SINE Alu 1 141 -8 1 768 207 0 0 0 chr17 24004070 24004093 -71268558 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 768 861 137 72 0 chr17 24004176 24004315 -71268336 + B1_Mur4 SINE Alu 2 150 0 1 768 477 0 0 0 chr17 24004371 24004424 -71268227 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 768 423 246 148 7 chr17 24007288 24007423 -71265228 - B3A SINE B2 -5 193 40 1 768 758 237 40 50 chr17 24007470 24007670 -71264981 - B3A SINE B2 0 198 1 1 768 914 133 27 27 chr17 24007733 24007880 -71264771 + B1_Mur4 SINE Alu 4 150 0 1 768 367 303 87 43 chr17 24007913 24007928 -71264723 - RSINE1 SINE B4 -4 161 147 1 768 876 239 30 0 chr17 24007928 24008125 -71264526 - B3 SINE B2 -12 204 2 2 768 367 303 87 43 chr17 24008125 24008247 -71264404 - RSINE1 SINE B4 -19 146 19 1 768 208 226 29 25 chr17 24008316 24008399 -71264252 - MIRc SINE MIR -142 126 46 2 768 312 356 17 0 chr17 24008617 24008732 -71263919 + MIR SINE MIR 65 181 -81 2 768 198 182 8 0 chr17 24009592 24009636 -71263015 - MIRc SINE MIR -48 160 116 2 768 267 220 68 0 chr17 24010257 24010316 -71262335 + PB1D10 SINE Alu 2 64 -53 2 768 497 182 34 37 chr17 24010370 24010527 -71262124 + B2_Mm2 SINE B2 26 205 -11 2 768 639 264 56 61 chr17 24011505 24011719 -71260932 - B3 SINE B2 -3 213 1 2 768 460 219 73 0 chr17 24011724 24011847 -71260804 - RCHARR1 DNA MER1_type -42 932 801 2 768 375 302 117 32 chr17 24011824 24011978 -71260673 - B3 SINE B2 -16 200 34 2 768 870 156 20 82 chr17 24011999 24012195 -71260456 - B2_Mm2 SINE B2 -11 184 1 2 768 1301 245 80 94 chr17 24012252 24012676 -71259975 - RCHARR1 DNA MER1_type -515 459 42 2 768 765 181 0 0 chr17 24013032 24013148 -71259503 - RSINE1 SINE B4 -47 118 3 3 768 875 162 0 7 chr17 24014878 24015021 -71257630 + B1_Mur1 SINE Alu 7 148 -1 3 768 690 291 13 41 chr17 24015023 24015255 -71257396 - B3A SINE B2 0 216 2 3 768 196 338 114 42 chr17 24015709 24015876 -71256775 - MIR SINE MIR -78 184 6 3 768 982 242 27 18 chr17 24016205 24016428 -71256223 + B4A SINE B4 1 225 -67 3 768 904 202 67 48 chr17 24016437 24016645 -71256006 + B3 SINE B2 5 216 0 3 768 423 288 66 29 chr17 24016651 24016787 -71255864 + B1_Mur1 SINE Alu 3 143 -6 3 768 380 158 0 13 chr17 24016789 24016866 -71255785 + GA-rich Low_complexity Low_complexity 3 78 0 3 768 232 211 98 66 chr17 24016967 24017028 -71255623 + B3A SINE B2 11 73 -125 3 768 504 111 0 0 chr17 24017030 24017111 -71255540 + (CA)n Simple_repeat Simple_repeat 2 82 0 3 768 669 98 0 0 chr17 24018068 24018180 -71254471 + (TC)n Simple_repeat Simple_repeat 2 113 0 4 768 661 317 65 72 chr17 24020130 24020422 -71252229 + B4A SINE B4 1 290 -2 4 768 186 133 0 0 chr17 24020442 24020472 -71252179 + (CATG)n Simple_repeat Simple_repeat 3 32 0 4 768 207 122 49 0 chr17 24020473 24020514 -71252137 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 768 195 316 76 42 chr17 24020674 24020793 -71251858 - L2c LINE L2 -238 3149 3027 4 768 619 246 49 0 chr17 24020852 24020974 -71251677 + B1_Mur3 SINE Alu 3 130 -19 4 768 189 238 262 0 chr17 24020986 24021066 -71251585 - MIR SINE MIR -130 132 32 4 768 777 237 50 30 chr17 24021097 24021284 -71251367 + ID_B1 SINE B4 21 211 -13 4 768 330 45 0 0 chr17 24021284 24021328 -71251323 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 768 777 237 50 30 chr17 24021328 24021340 -71251311 + ID_B1 SINE B4 212 223 -1 4 768 25 0 0 0 chr17 24021477 24021502 -71251149 + AT_rich Low_complexity Low_complexity 1 25 0 4 768 333 263 129 20 chr17 24021510 24021611 -71251040 + B1_Mur4 SINE Alu 11 122 -28 5 768 228 67 0 0 chr17 24021788 24021818 -71250833 + (CAT)n Simple_repeat Simple_repeat 2 31 0 5 768 699 170 89 45 chr17 24021866 24022045 -71250606 - B2_Mm2 SINE B2 -5 190 4 5 768 24 32 0 0 chr17 24022221 24022252 -71250399 + AT_rich Low_complexity Low_complexity 1 31 0 5 768 342 331 7 37 chr17 24023138 24023273 -71249378 - ID_B1 SINE B4 -3 221 91 5 768 427 278 44 22 chr17 24023290 24023426 -71249225 - RSINE1 SINE B4 0 165 27 5 768 189 154 0 0 chr17 24023460 24023499 -71249152 + (ATG)n Simple_repeat Simple_repeat 3 41 0 5 768 807 220 0 7 chr17 24023676 24023827 -71248824 - B1_Mur4 SINE Alu 0 150 1 5 768 335 158 35 0 chr17 24023850 24023907 -71248744 - B3A SINE B2 -136 62 4 5 768 294 161 18 0 chr17 24024665 24024721 -71247930 - URR1B DNA MER1_type -60 165 109 5 768 3246 135 184 8 chr17 24024789 24025032 -71247619 - RMER6A LTR ERVK 0 756 507 6 768 656 35 11 0 chr17 24025032 24025119 -71247532 + (TC)n Simple_repeat Simple_repeat 1 88 0 6 768 3246 135 184 8 chr17 24025119 24025518 -71247133 - RMER6A LTR ERVK -250 506 3 6 768 2090 149 42 58 chr17 24025777 24026155 -71246496 - RLTR14 LTR ERV1 -10 372 1 6 768 219 88 0 0 chr17 24026222 24026256 -71246395 + (TTC)n Simple_repeat Simple_repeat 2 35 0 6 768 368 274 0 41 chr17 24026265 24026387 -71246264 - PB1D9 SINE Alu -2 118 2 6 768 447 279 30 23 chr17 24026402 24026534 -71246117 - ID_B1 SINE B4 -11 213 81 6 768 1043 93 26 0 chr17 24026822 24026973 -71245678 - B2_Mm2 SINE B2 -1 194 40 6 768 240 111 0 0 chr17 24027044 24027080 -71245571 + (T)n Simple_repeat Simple_repeat 1 36 0 6 768 2721 108 35 5 chr17 24027239 24027638 -71245013 + RLTR10A LTR ERVK 1 411 0 6 768 1377 178 59 31 chr17 24027638 24028089 -71244562 + IAP-d-int LTR ERVK 295 602 -1385 6 768 1667 71 144 13 chr17 24028089 24028549 -71244102 + IAP-d-int LTR ERVK 5007 5527 -1015 6 768 1647 55 0 5 chr17 24028553 24028772 -71243879 + IAP-d-int LTR ERVK 5667 5884 -658 6 768 4932 59 32 15 chr17 24028773 24029460 -71243191 + RLTR10-int LTR ERVK 1288 1986 -1 6 768 2729 101 32 15 chr17 24029460 24029864 -71242787 + RLTR10A LTR ERVK 1 411 0 6 768 1105 149 17 0 chr17 24030649 24030824 -71241827 - B2_Mm2 SINE B2 -14 181 4 7 768 2215 99 35 3 chr17 24031146 24031461 -71241190 - ORR1A2 LTR MaLR 0 327 3 7 768 278 318 5 58 chr17 24031509 24031699 -71240952 + GA-rich Low_complexity Low_complexity 1 180 0 7 768 189 0 0 0 chr17 24032014 24032035 -71240616 + (CAGGC)n Simple_repeat Simple_repeat 1 21 0 7 768 236 261 72 0 chr17 24032907 24032976 -71239675 + RMER15 LTR ERVL 502 575 0 7 768 479 275 83 0 chr17 24032983 24033103 -71239548 - ID_B1 SINE B4 -93 131 2 7 768 330 211 28 14 chr17 24033214 24033286 -71239365 + ID2 SINE ID 2 74 -9 7 768 1314 58 0 0 chr17 24033289 24033461 -71239190 + (GGAAA)n Simple_repeat Simple_repeat 3 174 0 7 768 228 167 0 0 chr17 24033710 24033746 -71238905 + T-rich Low_complexity Low_complexity 1 36 0 7 768 303 188 31 0 chr17 24033746 24033810 -71238841 - B1_Mur3 SINE Alu 0 149 84 7 768 251 296 14 0 chr17 24033834 24033905 -71238746 - MIR SINE MIR -78 184 113 8 768 942 259 22 18 chr17 24034321 24034545 -71238106 + B4A SINE B4 1 225 -67 8 768 495 215 93 9 chr17 24034554 24034662 -71237989 + B3 SINE B2 5 121 -95 8 768 210 150 0 0 chr17 24034698 24034738 -71237913 + (GGA)n Simple_repeat Simple_repeat 3 42 0 8 768 232 211 98 66 chr17 24034833 24034894 -71237757 + B3A SINE B2 11 73 -125 8 768 342 123 0 0 chr17 24034896 24034953 -71237698 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 768 986 83 0 27 chr17 24035910 24036095 -71236556 + (TC)n Simple_repeat Simple_repeat 1 180 0 8 768 703 339 57 29 chr17 24038067 24038346 -71234305 + B4A SINE B4 2 288 -4 8 768 221 192 39 0 chr17 24038372 24038424 -71234227 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 768 204 343 83 28 chr17 24038542 24038722 -71233929 - L2c LINE L2 -171 3216 3027 8 768 653 241 15 22 chr17 24038781 24038917 -71233734 + B1_Mur3 SINE Alu 3 137 -12 9 768 688 273 34 34 chr17 24039029 24039221 -71233430 + ID_B1 SINE B4 20 211 -13 9 768 378 0 0 0 chr17 24039221 24039263 -71233388 + (CA)n Simple_repeat Simple_repeat 1 42 0 9 768 688 273 34 34 chr17 24039263 24039275 -71233376 + ID_B1 SINE B4 212 223 -1 9 768 25 0 0 0 chr17 24039413 24039438 -71233213 + AT_rich Low_complexity Low_complexity 1 25 0 9 768 927 109 0 0 chr17 24039725 24039872 -71232779 + (CAT)n Simple_repeat Simple_repeat 2 148 0 9 768 733 164 89 45 chr17 24039920 24040099 -71232552 - B2_Mm2 SINE B2 -5 190 4 9 768 24 32 0 0 chr17 24040273 24040304 -71232347 + AT_rich Low_complexity Low_complexity 1 31 0 9 768 365 326 24 38 chr17 24041193 24041353 -71231298 - ID_B1 SINE B4 -3 221 73 9 768 415 293 44 22 chr17 24041343 24041479 -71231172 - RSINE1 SINE B4 0 165 27 9 768 189 154 0 0 chr17 24041513 24041552 -71231099 + (ATG)n Simple_repeat Simple_repeat 3 41 0 9 768 827 213 0 7 chr17 24041729 24041880 -71230771 - B1_Mur4 SINE Alu 0 150 1 1 768 335 158 35 0 chr17 24041903 24041960 -71230691 - B3A SINE B2 -136 62 4 1 768 294 161 18 0 chr17 24042732 24042788 -71229863 - URR1B DNA MER1_type -60 165 109 1 768 3325 129 187 8 chr17 24042856 24043097 -71229554 - RMER6A LTR ERVK 0 756 507 1 768 616 61 20 0 chr17 24043097 24043195 -71229456 + (TC)n Simple_repeat Simple_repeat 1 100 0 1 768 3325 129 187 8 chr17 24043195 24043594 -71229057 - RMER6A LTR ERVK -250 506 3 1 768 2123 135 42 63 chr17 24043853 24044233 -71228418 - RLTR14 LTR ERV1 -10 372 1 1 768 219 88 0 0 chr17 24044303 24044337 -71228314 + (TTC)n Simple_repeat Simple_repeat 2 35 0 1 768 397 265 0 41 chr17 24044346 24044468 -71228183 - PB1D9 SINE Alu -2 118 2 1 768 461 285 23 23 chr17 24044483 24044616 -71228035 - ID_B1 SINE B4 -11 213 81 1 768 1038 105 27 0 chr17 24044904 24045078 -71227573 - B2_Mm2 SINE B2 0 195 15 1 768 216 97 0 0 chr17 24045128 24045159 -71227492 + (T)n Simple_repeat Simple_repeat 1 31 0 1 768 2890 88 32 5 chr17 24045319 24045719 -71226932 + RLTR10A LTR ERVK 1 411 0 1 768 1574 131 77 11 chr17 24045719 24046005 -71226646 + RLTR10-int LTR ERVK 302 606 -1381 1 768 359 89 18 18 chr17 24046014 24046071 -71226580 + IAP-d-int LTR ERVK 96 152 -6390 1 768 476 144 20 30 chr17 24046071 24046171 -71226480 + IAP-d-int LTR ERVK 56 154 -6388 1 768 319 77 39 0 chr17 24046171 24046223 -71226428 + IAP-d-int LTR ERVK 553 606 -1381 1 768 470 163 20 20 chr17 24046193 24046293 -71226358 + IAP-d-int LTR ERVK 56 155 -6387 1 768 470 153 20 30 chr17 24046315 24046416 -71226235 + IAP-d-int LTR ERVK 56 155 -6387 1 768 319 87 22 0 chr17 24046416 24046462 -71226189 + IAP-d-int LTR ERVK 106 152 -6390 1 768 319 77 39 0 chr17 24046440 24046492 -71226159 + IAP-d-int LTR ERVK 553 606 -1381 1 768 757 216 187 41 chr17 24046462 24046853 -71225798 + RLTR10-int LTR ERVK 56 503 -6039 1 768 3122 67 131 13 chr17 24046853 24047319 -71225332 + RLTR10-int LTR ERVK 5007 5527 -1015 1 768 4952 100 31 36 chr17 24047323 24048234 -71224417 + RLTR10-int LTR ERVK 1288 1986 -1 1 768 2764 90 62 0 chr17 24048234 24048503 -71224148 + RLTR10A LTR ERVK 1 278 -133 1 768 189 0 0 0 chr17 24048503 24048524 -71224127 + (GA)n Simple_repeat Simple_repeat 2 22 0 1 768 2764 90 62 0 chr17 24048524 24048641 -71224010 + RLTR10A LTR ERVK 279 410 -1 1 768 1185 131 17 0 chr17 24049428 24049603 -71223048 - B2_Mm2 SINE B2 -14 181 4 1 768 2256 92 35 3 chr17 24049925 24050240 -71222411 - ORR1A2 LTR MaLR 0 327 3 1 768 234 291 74 102 chr17 24050353 24050705 -71221946 - RMER10A LTR ERVL -82 360 19 1 768 234 0 0 0 chr17 24050800 24050826 -71221825 + (CAGGC)n Simple_repeat Simple_repeat 1 26 0 1 768 479 275 83 0 chr17 24051773 24051893 -71220758 - ID_B1 SINE B4 -93 131 2 1 768 337 211 26 26 chr17 24052004 24052082 -71220569 + ID4 SINE ID 2 79 -4 1 768 575 98 0 11 chr17 24052085 24052178 -71220473 + (GGAAA)n Simple_repeat Simple_repeat 3 94 0 1 768 192 135 0 0 chr17 24052436 24052473 -71220178 + (T)n Simple_repeat Simple_repeat 1 37 0 1 768 305 188 31 0 chr17 24052473 24052537 -71220114 - B1_Mur3 SINE Alu 0 149 84 1 768 934 264 22 18 chr17 24053048 24053272 -71219379 + B4A SINE B4 1 225 -67 1 768 510 200 100 0 chr17 24053281 24053381 -71219270 + B3 SINE B2 5 114 -102 1 768 201 175 0 0 chr17 24053425 24053465 -71219186 + GA-rich Low_complexity Low_complexity 3 42 0 1 768 232 211 98 66 chr17 24053560 24053621 -71219030 + B3A SINE B2 11 73 -125 1 768 414 127 0 0 chr17 24053623 24053694 -71218957 + (CA)n Simple_repeat Simple_repeat 2 72 0 1 768 918 48 0 0 chr17 24054646 24054770 -71217881 + (TC)n Simple_repeat Simple_repeat 2 125 0 1 768 775 333 42 31 chr17 24056719 24057007 -71215644 + B4A SINE B4 2 292 0 1 768 186 133 0 0 chr17 24057025 24057055 -71215596 + (CATG)n Simple_repeat Simple_repeat 3 32 0 1 768 207 122 49 0 chr17 24057056 24057097 -71215554 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 768 195 316 76 42 chr17 24057257 24057376 -71215275 - L2c LINE L2 -238 3149 3027 1 768 624 238 49 0 chr17 24057435 24057557 -71215094 + B1_Mur3 SINE Alu 3 130 -19 1 768 189 238 262 0 chr17 24057569 24057649 -71215002 - MIR SINE MIR -130 132 32 1 768 723 257 36 36 chr17 24057675 24057869 -71214782 + ID_B1 SINE B4 20 213 -11 1 768 201 154 0 0 chr17 24057869 24057908 -71214743 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 768 27 29 0 0 chr17 24058054 24058088 -71214563 + AT_rich Low_complexity Low_complexity 1 34 0 1 768 365 240 118 20 chr17 24058096 24058198 -71214453 + B1_Mur4 SINE Alu 11 122 -28 1 768 698 162 91 46 chr17 24058451 24058626 -71214025 - B2_Mm2 SINE B2 -9 186 4 1 768 24 32 0 0 chr17 24058802 24058833 -71213818 + AT_rich Low_complexity Low_complexity 1 31 0 1 768 372 305 22 51 chr17 24059711 24059849 -71212802 - ID_B1 SINE B4 0 224 91 1 768 207 0 0 0 chr17 24059864 24059887 -71212764 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 768 198 0 0 0 chr17 24060040 24060062 -71212589 + (ATG)n Simple_repeat Simple_repeat 3 24 0 1 768 2557 107 158 21 chr17 24060203 24060229 -71212422 - RMER6A LTR ERVK -223 533 491 1 768 672 13 0 0 chr17 24060229 24060306 -71212345 + (TC)n Simple_repeat Simple_repeat 1 77 0 1 768 2557 107 158 21 chr17 24060306 24060748 -71211903 - RMER6A LTR ERVK -266 490 2 1 768 1172 181 0 25 chr17 24060997 24061201 -71211450 - RLTR14 LTR ERV1 0 382 184 1 768 372 83 47 23 chr17 24061981 24062067 -71210584 + (CAGAGA)n Simple_repeat Simple_repeat 3 90 0 1 768 1713 214 70 44 chr17 24062445 24062919 -71209732 - RMER17C-int LTR ERVK -2702 536 51 1 768 1146 98 11 16 chr17 24062926 24063112 -71209539 + RMER17C LTR ERVK 226 410 0 1 768 23 54 0 0 chr17 24063219 24063256 -71209395 + AT_rich Low_complexity Low_complexity 1 37 0 1 768 1293 216 17 0 chr17 24063273 24063514 -71209137 + MTC LTR MaLR 1 245 -176 1 768 1860 132 44 13 chr17 24063516 24063916 -71208735 + RLTR28 LTR ERVL 1 510 -14 1 768 227 217 0 0 chr17 24063936 24063982 -71208669 + RLTR28 LTR ERVL 474 519 -5 1 768 597 226 184 7 chr17 24063986 24064133 -71208518 + MTC LTR MaLR 245 417 -2 1 768 2202 121 48 74 chr17 24064716 24065137 -71207514 + RMER17C LTR ERVK 1 410 0 1 768 274 254 68 0 chr17 24065278 24065337 -71207314 - B1F SINE Alu -32 117 55 1 768 216 279 0 0 chr17 24065459 24065502 -71207149 - B4A SINE B4 -169 123 81 1 768 287 293 25 33 chr17 24065778 24065898 -71206753 - Lx8 LINE L1 -6 7467 7349 1 768 781 238 93 39 chr17 24065888 24066146 -71206505 - Lx6 LINE L1 -9 7451 7180 1 768 335 280 48 48 chr17 24066156 24066261 -71206390 - RMER20B LTR ERVK -25 602 498 1 768 726 288 79 126 chr17 24066245 24066772 -71205879 - RMER20B LTR ERVK -26 601 30 1 768 1063 239 57 0 chr17 24066827 24067090 -71205561 - Lx5 LINE L1 -268 6782 6505 1 768 2977 176 72 16 chr17 24067085 24067720 -71204931 + L1_Mur3 LINE L1 4697 5367 -513 1 768 902 163 0 0 chr17 24067721 24067862 -71204789 - B1_Mus1 SINE Alu -5 143 3 1 768 1099 121 0 0 chr17 24067896 24068045 -71204606 + B1_Mur4 SINE Alu 2 150 0 1 768 186 133 0 0 chr17 24068049 24068079 -71204572 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 1 768 2263 262 77 17 chr17 24068120 24068610 -71204041 - Lx8 LINE L1 -175 7298 6782 1 768 390 208 327 9 chr17 24068610 24068717 -71203934 + B1_Mur2 SINE Alu 1 141 -8 1 768 285 29 0 0 chr17 24068718 24068752 -71203899 + (TAAAA)n Simple_repeat Simple_repeat 5 38 0 1 768 2263 262 77 17 chr17 24068752 24068951 -71203700 - Lx8 LINE L1 -692 6781 6567 1 768 1838 156 42 40 chr17 24068958 24069311 -71203340 - ORR1C1 LTR MaLR -24 354 1 1 768 360 264 0 0 chr17 24069316 24069407 -71203244 - Lx8 LINE L1 -915 6558 6468 1 768 342 96 0 40 chr17 24069627 24069703 -71202948 + (CCCTAA)n Simple_repeat Simple_repeat 6 78 0 1 768 256 217 70 0 chr17 24070188 24070303 -71202348 + (TA)n Simple_repeat Simple_repeat 1 123 0 1 768 434 61 0 15 chr17 24070303 24070370 -71202281 + (TCTA)n Simple_repeat Simple_repeat 1 66 0 1 768 854 277 54 81 chr17 24070670 24070965 -71201686 + B4A SINE B4 6 292 0 1 768 253 257 0 0 chr17 24070968 24071042 -71201609 + (CA)n Simple_repeat Simple_repeat 1 74 0 1 768 1277 183 85 20 chr17 24071052 24071347 -71201304 - ORR1B1 LTR MaLR 0 394 81 1 768 1521 167 36 54 chr17 24071358 24071693 -71200958 - ORR1A4 LTR MaLR 0 329 1 1 768 404 278 43 93 chr17 24072590 24072621 -71200030 + B4 SINE B4 67 90 -202 1 768 792 183 15 0 chr17 24072621 24072752 -71199899 + B1_Mur4 SINE Alu 1 133 -17 1 768 235 361 8 39 chr17 24072747 24072874 -71199777 - MER113 DNA MER1_type -277 244 122 1 768 1300 152 19 60 chr17 24074180 24074446 -71198205 - RLTR28 LTR ERVL -239 285 31 1 768 415 169 14 0 chr17 24074950 24075021 -71197630 - RLTR28 LTR ERVL -409 72 1 1 768 252 77 0 0 chr17 24075297 24075336 -71197315 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1 768 1247 76 0 0 chr17 24075337 24075495 -71197156 - B2_Mm2 SINE B2 -37 158 1 1 768 616 258 139 21 chr17 24075498 24075692 -71196959 - ID_B1 SINE B4 -2 222 6 1 768 917 292 93 16 chr17 24075948 24076258 -71196393 - ORR1D2 LTR MaLR 0 359 26 1 768 545 237 116 22 chr17 24076385 24076566 -71196085 + B3A SINE B2 1 198 0 1 768 551 255 54 54 chr17 24076809 24076958 -71195693 + RSINE1 SINE B4 3 151 -14 1 768 25 0 0 0 chr17 24076968 24076993 -71195658 + AT_rich Low_complexity Low_complexity 1 25 0 1 768 1163 51 0 0 chr17 24077143 24077280 -71195371 + B1_Mus1 SINE Alu 2 138 -10 1 768 792 256 20 0 chr17 24077906 24078101 -71194550 - B3 SINE B2 -14 202 4 1 768 732 54 0 0 chr17 24078214 24078307 -71194344 + (CCAA)n Simple_repeat Simple_repeat 2 94 0 1 768 949 254 40 131 chr17 24078310 24078445 -71194206 - RLTR40 LTR ERVK -277 540 431 1 768 216 0 0 0 chr17 24078445 24078469 -71194182 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1 768 949 254 40 131 chr17 24078469 24078831 -71193820 - RLTR40 LTR ERVK -387 430 88 1 768 257 324 14 0 chr17 24079119 24079193 -71193458 - MER45A DNA Tip100 -17 161 87 1 768 1179 82 0 0 chr17 24080300 24080447 -71192204 - B1_Mus2 SINE Alu 0 147 1 1 768 698 283 54 29 chr17 24080489 24080711 -71191940 + B4A SINE B4 6 231 -61 1 768 643 290 40 64 chr17 24080711 24081009 -71191642 + B4A SINE B4 2 292 0 1 768 698 283 54 29 chr17 24081009 24081066 -71191585 + B4A SINE B4 232 292 0 1 768 186 171 0 0 chr17 24082352 24082393 -71190258 + (ATG)n Simple_repeat Simple_repeat 3 43 0 1 768 468 164 0 0 chr17 24082959 24083026 -71189625 - ID4 SINE ID -13 70 4 1 768 741 114 0 0 chr17 24083030 24083144 -71189507 + (TCTA)n Simple_repeat Simple_repeat 4 117 0 1 768 269 276 103 19 chr17 24083495 24083602 -71189049 - Charlie4a DNA MER1_type -379 129 14 1 768 318 242 176 29 chr17 24083641 24083743 -71188908 + PB1 SINE Alu 3 119 -8 2 768 252 77 0 0 chr17 24083857 24083896 -71188755 + (TTTTG)n Simple_repeat Simple_repeat 3 41 0 2 768 1208 68 0 0 chr17 24083906 24084054 -71188597 - B1_Mus1 SINE Alu 0 148 1 2 768 186 174 0 0 chr17 24084078 24084124 -71188527 + (CAGA)n Simple_repeat Simple_repeat 3 48 0 2 768 581 274 67 38 chr17 24084127 24084336 -71188315 + B3 SINE B2 2 216 0 2 768 266 265 59 0 chr17 24084352 24084420 -71188231 + ID_B1 SINE B4 82 153 -71 2 768 1142 249 30 79 chr17 24084425 24084792 -71187859 - MT2B LTR ERVL 0 601 253 2 768 387 175 0 0 chr17 24084798 24084918 -71187733 + (TG)n Simple_repeat Simple_repeat 2 121 0 2 768 198 0 0 0 chr17 24085248 24085270 -71187381 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 2 768 503 144 0 10 chr17 24085635 24085733 -71186918 + (TA)n Simple_repeat Simple_repeat 2 98 0 2 768 403 289 0 37 chr17 24085734 24085842 -71186809 + PB1D9 SINE Alu 2 105 -15 2 768 1122 108 0 0 chr17 24085845 24085993 -71186658 + B1_Mus1 SINE Alu 1 148 0 2 768 253 278 93 25 chr17 24086308 24086426 -71186225 - L2c LINE L2 -234 3153 3028 2 768 1076 73 158 0 chr17 24086535 24086700 -71185951 - B2_Mm2 SINE B2 -3 192 2 2 768 1286 234 140 14 chr17 24086700 24087064 -71185587 + RLTR33 LTR ERVK 189 598 -80 2 768 255 61 0 0 chr17 24087556 24087589 -71185062 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 768 293 235 58 14 chr17 24087606 24087675 -71184976 - ID_B1 SINE B4 -4 220 149 2 768 301 279 15 103 chr17 24087672 24087801 -71184850 + MT2B LTR ERVL 16 133 -468 2 768 183 42 0 0 chr17 24087801 24087825 -71184826 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 768 1138 243 30 79 chr17 24087831 24088198 -71184453 + MT2B LTR ERVL 253 601 0 2 768 261 279 59 0 chr17 24088203 24088271 -71184380 - ID_B1 SINE B4 -71 153 82 2 768 561 279 67 38 chr17 24088287 24088496 -71184155 - B3 SINE B2 0 216 2 2 768 186 174 0 0 chr17 24088499 24088545 -71184106 + (TCTG)n Simple_repeat Simple_repeat 3 48 0 2 768 1208 68 0 0 chr17 24088569 24088717 -71183934 + B1_Mus1 SINE Alu 1 148 0 2 768 236 53 26 0 chr17 24088727 24088765 -71183886 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 2 768 21 36 0 0 chr17 24088848 24088876 -71183775 + AT_rich Low_complexity Low_complexity 1 28 0 2 768 318 242 176 29 chr17 24088881 24088983 -71183668 - PB1 SINE Alu -8 119 3 2 768 269 276 103 19 chr17 24089022 24089129 -71183522 + Charlie4a DNA MER1_type 14 129 -379 2 768 783 97 0 0 chr17 24089480 24089594 -71183057 + (TAGA)n Simple_repeat Simple_repeat 4 117 0 2 768 468 164 0 0 chr17 24089598 24089665 -71182986 + ID4 SINE ID 4 70 -13 2 768 384 191 0 0 chr17 24090230 24090319 -71182332 + (CAT)n Simple_repeat Simple_repeat 3 91 0 2 768 246 62 0 0 chr17 24093509 24093541 -71179110 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2 768 553 285 29 7 chr17 24093577 24093715 -71178936 - RSINE1 SINE B4 -21 144 4 2 768 330 292 14 103 chr17 24093734 24093772 -71178879 - B1F SINE Alu -8 141 110 2 768 529 52 26 0 chr17 24093772 24093849 -71178802 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 2 768 368 286 0 67 chr17 24093849 24093955 -71178696 - PB1D7 SINE Alu -40 109 10 2 768 384 256 92 17 chr17 24093974 24094093 -71178558 - B1F SINE Alu 0 149 22 2 768 279 311 45 45 chr17 24094142 24094253 -71178398 + PB1D10 SINE Alu 1 111 -6 2 768 612 182 0 0 chr17 24094308 24094440 -71178211 + (TG)n Simple_repeat Simple_repeat 2 133 0 2 768 494 323 53 30 chr17 24094454 24094643 -71178008 - B4A SINE B4 -10 282 88 2 768 225 0 0 0 chr17 24094643 24094668 -71177983 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2 768 494 323 53 30 chr17 24094668 24094740 -71177911 - B4A SINE B4 -205 87 16 2 768 432 378 58 13 chr17 24094740 24094965 -71177686 - B4A SINE B4 -57 235 1 2 768 32 26 0 0 chr17 24097965 24098004 -71174647 + AT_rich Low_complexity Low_complexity 1 39 0 2 768 711 216 139 11 chr17 24098008 24098195 -71174456 - B3 SINE B2 -5 211 1 2 768 554 236 18 0 chr17 24098222 24098332 -71174319 - PB1D7 SINE Alu -6 114 3 2 768 445 261 43 0 chr17 24098702 24098817 -71173834 + PB1D7 SINE Alu 1 120 0 2 768 898 315 94 17 chr17 24099058 24099410 -71173241 - MTE2a LTR MaLR 0 379 1 2 768 225 335 26 137 chr17 24099512 24099702 -71172949 + MT2B LTR ERVL 94 262 -339 2 768 511 252 95 56 chr17 24099579 24099786 -71172865 + ID_B1 SINE B4 79 276 -16 2 768 377 231 154 0 chr17 24099894 24099985 -71172666 + RSINE1 SINE B4 3 107 -58 2 768 22 35 0 0 chr17 24100191 24100220 -71172431 + AT_rich Low_complexity Low_complexity 1 29 0 2 768 218 167 0 0 chr17 24100294 24100330 -71172321 + (CAAG)n Simple_repeat Simple_repeat 2 37 0 2 768 370 105 9 0 chr17 24100437 24100496 -71172155 + MTE2a LTR MaLR 1 63 -316 2 768 495 303 12 61 chr17 24100832 24100997 -71171654 + RSINE1 SINE B4 9 165 0 2 768 22 0 0 0 chr17 24101003 24101025 -71171626 + AT_rich Low_complexity Low_complexity 1 22 0 2 768 311 0 0 25 chr17 24101227 24101267 -71171384 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 768 441 257 161 68 chr17 24101269 24101461 -71171190 + B4A SINE B4 83 292 0 2 768 2025 99 98 7 chr17 24101471 24101766 -71170885 - ORR1A2 LTR MaLR -1 326 5 2 768 501 246 114 8 chr17 24101792 24101915 -71170736 + ID_B1 SINE B4 89 224 0 2 768 189 154 0 0 chr17 24101922 24101961 -71170690 + (TAAA)n Simple_repeat Simple_repeat 4 42 0 2 768 469 297 0 0 chr17 24101968 24102079 -71170572 + PB1D7 SINE Alu 1 111 -9 2 768 261 0 0 0 chr17 24102079 24102108 -71170543 + (CAAT)n Simple_repeat Simple_repeat 2 30 0 2 768 632 56 11 0 chr17 24102141 24102230 -71170421 + (TG)n Simple_repeat Simple_repeat 1 90 0 2 768 290 291 89 18 chr17 24102268 24102380 -71170271 - B1F2 SINE Alu -26 123 4 2 768 376 263 33 148 chr17 24102380 24102487 -71170164 - B4A SINE B4 -202 90 5 2 768 516 243 27 0 chr17 24102494 24102605 -71170046 - PB1D7 SINE Alu 0 120 7 2 768 210 71 0 0 chr17 24103369 24103397 -71169254 + (TTG)n Simple_repeat Simple_repeat 1 28 0 2 768 369 349 12 6 chr17 24103404 24103571 -71169080 + (TGGA)n Simple_repeat Simple_repeat 2 169 0 2 768 226 324 62 68 chr17 24103660 24103806 -71168845 - MIR SINE MIR -21 241 97 2 768 485 296 21 0 chr17 24104713 24104855 -71167796 + ID_B1 SINE B4 79 223 -1 2 768 650 170 0 7 chr17 24105257 24105405 -71167246 + (TG)n Simple_repeat Simple_repeat 1 147 0 2 768 881 266 197 0 chr17 24105405 24105649 -71167002 - B4 SINE B4 0 292 1 2 768 645 14 0 0 chr17 24106202 24106276 -71166375 + (TC)n Simple_repeat Simple_repeat 2 75 0 2 768 1094 194 23 45 chr17 24106295 24106516 -71166135 - B3 SINE B2 0 216 1 2 768 1385 47 18 0 chr17 24106531 24106702 -71165949 - B2_Mm1a SINE B2 -18 175 2 2 768 1112 103 0 0 chr17 24107002 24107148 -71165503 + B1_Mus1 SINE Alu 2 147 -1 2 768 329 266 21 11 chr17 24107398 24107493 -71165158 - RLTR42-int LTR ERVK -4269 1253 1158 2 768 740 171 8 45 chr17 24107635 24107822 -71164829 + B3 SINE B2 1 180 -15 2 768 1192 41 7 7 chr17 24107852 24107998 -71164653 - B1_Mus2 SINE Alu 0 147 2 2 768 241 309 121 24 chr17 24108095 24108178 -71164473 - B3 SINE B2 -125 91 1 2 768 261 284 88 72 chr17 24108271 24108396 -71164255 + MIRb SINE MIR 2 128 -140 2 768 5379 148 31 14 chr17 24108589 24109481 -71163170 - RMER13B LTR ERVK 0 908 1 2 768 220 286 107 0 chr17 24110294 24110406 -71162245 + MIRc SINE MIR 39 162 -106 2 768 1521 263 95 22 chr17 24111249 24111797 -71160854 + Lx8 LINE L1 6878 7465 -8 2 768 835 246 82 13 chr17 24113697 24113928 -71158723 + RLTR18B LTR ERVK 5 251 -261 2 768 354 45 0 0 chr17 24114041 24114085 -71158566 + (CAG)n Simple_repeat Simple_repeat 1 44 0 2 768 2253 162 93 37 chr17 24114085 24114130 -71158521 - RLTR20B2 LTR ERVK -51 509 465 2 768 378 0 0 0 chr17 24114130 24114172 -71158479 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 768 2253 162 93 37 chr17 24114172 24114608 -71158043 - RLTR20B2 LTR ERVK -96 464 3 2 768 888 154 0 0 chr17 24114608 24114738 -71157913 - B1_Mur2 SINE Alu -19 130 1 2 768 611 60 12 0 chr17 24115149 24115233 -71157418 + (TC)n Simple_repeat Simple_repeat 2 86 0 2 768 739 176 0 0 chr17 24115242 24115373 -71157278 - B1_Mur4 SINE Alu -16 134 4 2 768 1086 176 29 10 chr17 24115472 24115679 -71156972 + RLTR18B LTR ERVK 302 512 0 2 768 237 65 0 0 chr17 24116045 24116076 -71156575 + (TCTCCC)n Simple_repeat Simple_repeat 5 35 0 2 768 411 21 0 0 chr17 24116078 24116126 -71156525 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 768 286 214 272 0 chr17 24116126 24116229 -71156422 + B4A SINE B4 86 216 -76 2 768 552 289 64 0 chr17 24116364 24116437 -71156214 + ID SINE ID 2 85 -139 2 768 267 291 52 43 chr17 24116437 24116552 -71156099 + PB1D10 SINE Alu 1 116 -1 2 768 202 188 0 0 chr17 24116880 24116912 -71155739 + polypurine Low_complexity Low_complexity 3 34 0 2 768 26 30 0 0 chr17 24116949 24116982 -71155669 + AT_rich Low_complexity Low_complexity 1 33 0 2 769 216 0 0 0 chr17 24117669 24117693 -71154958 + (A)n Simple_repeat Simple_repeat 1 24 0 2 769 3034 61 5 8 chr17 24117817 24118214 -71154437 + MTA_Mm LTR MaLR 1 396 0 2 769 180 77 0 0 chr17 24118342 24118368 -71154283 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2 769 306 73 0 0 chr17 24118485 24118526 -71154125 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 769 223 330 202 0 chr17 24118535 24118629 -71154022 - RSINE1 SINE B4 -16 149 37 2 769 367 234 31 33 chr17 24118765 24118872 -71153779 + MTEb LTR MaLR 269 379 0 3 769 234 277 84 0 chr17 24118934 24119017 -71153634 + MamGypLTR3 LTR Gypsy 659 748 -91 3 769 274 311 89 38 chr17 24119574 24119731 -71152920 + RSINE1 SINE B4 1 165 0 3 769 551 195 35 17 chr17 24119763 24119878 -71152773 + PB1D9 SINE Alu 3 119 -1 3 769 252 279 16 0 chr17 24120180 24120241 -71152410 - L2 LINE L2 -545 2874 2813 3 769 351 298 16 0 chr17 24120731 24120855 -71151796 - L1M5 LINE L1 -408 5771 5646 3 769 1396 65 0 21 chr17 24121135 24121325 -71151326 + B2_Mm2 SINE B2 2 187 -8 3 769 806 200 123 77 chr17 24121406 24121658 -71150993 - RMER1C Other Other -23 1319 909 3 769 439 304 74 62 chr17 24121965 24122221 -71150430 - MTEa LTR MaLR -117 262 4 3 769 231 330 173 46 chr17 24122263 24122587 -71150064 - L2 LINE L2 -875 2544 2180 3 769 1563 153 25 159 chr17 24122605 24122783 -71149868 + RMER17C LTR ERVK 1 184 -226 3 769 927 109 11 22 chr17 24122783 24122961 -71149690 + (TTCTC)n Simple_repeat Simple_repeat 2 177 0 3 769 1563 153 25 159 chr17 24122961 24123255 -71149396 + RMER17C LTR ERVK 185 410 0 3 769 236 275 52 137 chr17 24124151 24124362 -71148289 + RMER10A LTR ERVL 18 210 -232 3 769 924 64 21 0 chr17 24124377 24124518 -71148133 + (TC)n Simple_repeat Simple_repeat 2 145 0 3 769 1107 269 98 9 chr17 24124787 24125135 -71147516 - MTE2a LTR MaLR 0 379 1 3 769 485 301 50 80 chr17 24126984 24127222 -71145429 - RLTR26 LTR ERVK -223 419 189 3 769 1366 239 73 55 chr17 24127319 24127811 -71144840 - RLTR20B3 LTR ERVK -56 521 21 3 769 1062 222 0 5 chr17 24128993 24129206 -71143445 + B3 SINE B2 5 216 0 3 769 393 86 0 0 chr17 24130599 24130657 -71141994 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 769 203 56 0 129 chr17 24132319 24132381 -71140270 + (TCTG)n Simple_repeat Simple_repeat 3 56 0 3 769 307 187 19 0 chr17 24132679 24132786 -71139865 + CT-rich Low_complexity Low_complexity 2 110 0 3 769 589 163 0 0 chr17 24132786 24132884 -71139767 - B1_Mur3 SINE Alu -51 98 1 3 769 320 133 17 0 chr17 24132887 24132947 -71139704 + (TCCC)n Simple_repeat Simple_repeat 2 62 0 3 769 498 17 0 0 chr17 24134426 24134485 -71138166 + (CA)n Simple_repeat Simple_repeat 1 59 0 3 769 265 303 71 32 chr17 24136795 24136921 -71135730 - L2b LINE L2 -4 3371 3241 3 769 247 149 21 21 chr17 24137376 24137424 -71135227 - L2a LINE L2 0 3426 3379 3 769 528 273 8 2 chr17 24137985 24138125 -71134526 + B1F SINE Alu 2 141 -9 3 769 1063 194 28 9 chr17 24138139 24138352 -71134299 + ID_B1 SINE B4 6 222 -2 3 769 736 163 92 0 chr17 24138561 24138702 -71133949 + MTEb LTR MaLR 9 162 -217 3 769 986 272 99 22 chr17 24138713 24139036 -71133615 - MTE2a LTR MaLR -12 367 20 3 769 572 241 103 6 chr17 24139055 24139230 -71133421 + MTEb LTR MaLR 169 360 -19 3 769 1672 267 181 19 chr17 24139588 24140264 -71132387 + MTEa-int LTR MaLR 1 785 -795 3 769 704 170 70 7 chr17 24140296 24140438 -71132213 + MTEa-int LTR MaLR 897 1047 -533 3 769 1251 177 0 0 chr17 24140436 24140639 -71132012 + URR1A DNA MER1_type 5 207 -19 3 769 1160 102 15 46 chr17 24140639 24140834 -71131817 + B2_Mm1t SINE B2 2 190 -3 3 769 829 316 70 4 chr17 24140857 24141127 -71131524 + MTEa-int LTR MaLR 1042 1329 -251 3 769 616 309 62 50 chr17 24141631 24141769 -71130882 + MTEa-int LTR MaLR 1316 1459 -121 3 769 849 125 20 14 chr17 24141769 24141900 -71130751 + B1_Mus2 SINE Alu 1 134 -13 3 769 243 0 0 0 chr17 24141900 24141927 -71130724 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 3 769 849 125 20 14 chr17 24141927 24141941 -71130710 + B1_Mus2 SINE Alu 135 147 0 3 769 616 309 62 50 chr17 24141941 24142061 -71130590 + MTEa-int LTR MaLR 1460 1577 -3 3 769 853 275 126 75 chr17 24142064 24142398 -71130253 + MTEa LTR MaLR 1 351 -28 3 769 1006 252 97 15 chr17 24142758 24143100 -71129551 - ORR1D2 LTR MaLR 0 370 1 3 769 591 15 0 0 chr17 24143722 24143790 -71128861 + (GA)n Simple_repeat Simple_repeat 1 68 0 3 769 236 330 11 0 chr17 24144248 24144339 -71128312 + B1F1 SINE Alu 25 116 -33 3 769 199 309 37 0 chr17 24145249 24145330 -71127321 + L2 LINE L2 2510 2593 -826 3 769 2351 220 19 5 chr17 24145507 24146009 -71126642 + Lx6 LINE L1 6568 7433 -27 3 769 526 276 18 82 chr17 24146040 24146210 -71126441 + RSINE1 SINE B4 3 161 -4 3 769 356 224 0 0 chr17 24146243 24146319 -71126332 + ID_B1 SINE B4 148 223 -1 3 769 806 241 85 5 chr17 24146899 24147087 -71125564 - B3 SINE B2 -7 209 7 3 769 799 196 0 0 chr17 24147227 24147365 -71125286 - B1_Mur2 SINE Alu -1 148 11 3 769 474 237 104 22 chr17 24147409 24147543 -71125108 - B1F SINE Alu 0 149 5 3 769 440 289 83 14 chr17 24147755 24147899 -71124752 + RSINE1 SINE B4 2 155 -10 3 769 22 0 0 0 chr17 24147960 24147982 -71124669 + AT_rich Low_complexity Low_complexity 1 22 0 3 769 554 284 39 64 chr17 24147989 24148004 -71124647 - B3A SINE B2 0 198 186 3 769 919 121 29 0 chr17 24148004 24148144 -71124507 - B1_Mur3 SINE Alu -5 144 1 3 769 261 0 0 0 chr17 24148154 24148183 -71124468 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 3 769 554 284 39 64 chr17 24148183 24148359 -71124292 - B3A SINE B2 -21 177 1 3 769 1072 167 45 5 chr17 24148359 24148565 -71124086 + ORR1C2 LTR MaLR 170 384 0 3 769 24 32 0 0 chr17 24148583 24148614 -71124037 + AT_rich Low_complexity Low_complexity 1 31 0 3 769 265 327 80 33 chr17 24148746 24148958 -71123693 - L1M5 LINE L1 -263 5861 5640 3 769 243 0 0 0 chr17 24149033 24149060 -71123591 + (TC)n Simple_repeat Simple_repeat 1 27 0 3 769 523 0 0 29 chr17 24149060 24149128 -71123523 + (CA)n Simple_repeat Simple_repeat 1 67 0 3 769 399 262 47 0 chr17 24149128 24149235 -71123416 - PB1D10 SINE Alu 0 117 6 3 769 693 66 0 0 chr17 24149254 24149345 -71123306 + (GAAA)n Simple_repeat Simple_repeat 2 92 0 3 769 1280 73 6 0 chr17 24149345 24149522 -71123129 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 3 769 584 91 0 11 chr17 24149522 24149611 -71123040 + (GAAA)n Simple_repeat Simple_repeat 1 88 0 3 769 881 257 0 0 chr17 24150106 24150289 -71122362 + B3 SINE B2 29 211 -5 3 769 535 182 0 35 chr17 24150415 24150529 -71122122 + PB1D9 SINE Alu 2 111 -9 3 769 243 0 0 0 chr17 24150542 24150569 -71122082 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 769 295 225 137 72 chr17 24151406 24151482 -71121169 + ID_B1 SINE B4 77 164 -60 3 769 1763 177 24 40 chr17 24151482 24151858 -71120793 - ORR1D1 LTR MaLR -4 370 1 3 769 295 225 137 72 chr17 24151858 24151920 -71120731 + ID_B1 SINE B4 165 224 0 3 769 293 254 0 0 chr17 24151969 24152040 -71120611 + MER110A LTR ERV1 98 168 -300 3 769 246 81 0 0 chr17 24152137 24152174 -71120477 + (CACCC)n Simple_repeat Simple_repeat 5 41 0 3 769 235 170 0 41 chr17 24153028 24153077 -71119574 + ID SINE ID 28 74 -150 3 769 932 224 30 5 chr17 24153108 24153310 -71119341 + B3 SINE B2 4 210 -6 3 769 387 231 190 0 chr17 24153336 24153457 -71119194 + B1F SINE Alu 1 144 -5 3 769 22 0 0 0 chr17 24153457 24153479 -71119172 + AT_rich Low_complexity Low_complexity 1 22 0 3 769 471 246 55 0 chr17 24153483 24153593 -71119058 + B1_Mur3 SINE Alu 1 116 -33 3 769 2069 127 22 36 chr17 24153611 24153970 -71118681 + ORR1B1 LTR MaLR 41 394 0 3 769 14389 71 3 7 chr17 24154042 24155403 -71117248 - L1_Mus3 LINE L1 -1 6637 5295 3 769 1139 81 0 0 chr17 24155403 24155551 -71117100 - B1_Mus1 SINE Alu 0 148 1 3 769 14389 100 6 10 chr17 24155551 24157109 -71115542 - L1_Mus3 LINE L1 -589 5294 3732 3 769 613 218 23 8 chr17 24158276 24158429 -71114222 - MTC LTR MaLR -2 419 218 3 769 2599 213 62 92 chr17 24158429 24159594 -71113057 - RMER1B Other Other -191 875 15 3 769 2761 58 58 5 chr17 24159594 24159994 -71112657 - BGLII LTR ERVK 0 421 1 3 769 1118 224 135 120 chr17 24159994 24160053 -71112598 - RMER1B Other Other -962 104 46 3 769 545 202 0 0 chr17 24160295 24160394 -71112257 - MTC LTR MaLR -320 99 1 3 769 233 246 0 0 chr17 24160394 24160451 -71112200 - MTC-int LTR MaLR 0 1258 1202 3 769 1046 64 43 0 chr17 24160451 24160592 -71112059 + B1_Mm SINE Alu 1 147 0 3 769 375 86 42 86 chr17 24161483 24161605 -71111046 - MTC-int LTR MaLR -85 1013 928 3 769 1151 62 0 0 chr17 24161633 24161778 -71110873 - B1_Mus1 SINE Alu -2 146 2 3 769 340 143 0 168 chr17 24161778 24161796 -71110855 - MTC-int LTR MaLR -159 1099 1085 3 769 683 214 28 14 chr17 24161796 24161938 -71110713 + B1_Mur2 SINE Alu 5 148 -1 3 769 340 153 4 153 chr17 24161938 24162029 -71110622 - MTC-int LTR MaLR -174 1084 1016 3 769 977 72 0 21 chr17 24162055 24162196 -71110455 - B1_Mus1 SINE Alu 0 148 11 3 769 1367 170 70 4 chr17 24162197 24162468 -71110183 - MTC-int LTR MaLR -261 997 709 3 769 2299 116 39 6 chr17 24162488 24162852 -71109799 + RLTR14 LTR ERV1 7 382 0 3 769 962 181 11 153 chr17 24162852 24163123 -71109528 - MTC-int LTR MaLR -643 615 384 3 769 531 0 0 0 chr17 24163132 24163191 -71109460 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 769 2454 98 35 5 chr17 24163303 24163702 -71108949 + RMER17A LTR ERVK 1 411 -340 3 769 4493 186 58 32 chr17 24163704 24164662 -71107989 - RMER1A Other Other -25 1005 23 3 769 1337 222 3 58 chr17 24164662 24164973 -71107678 - MTC-int LTR MaLR -862 396 103 3 769 1547 195 3 13 chr17 24164965 24165267 -71107384 - MTC LTR MaLR -122 299 1 3 769 24 0 0 0 chr17 24165518 24165542 -71107109 + AT_rich Low_complexity Low_complexity 1 24 0 3 769 915 268 72 25 chr17 24165564 24165840 -71106811 + Lx5 LINE L1 6751 7039 -11 3 769 396 0 0 0 chr17 24165840 24165884 -71106767 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 3 769 262 286 57 0 chr17 24165903 24165973 -71106678 + ID4 SINE ID 10 83 0 3 769 211 346 62 0 chr17 24165973 24165984 -71106667 + ID_B1 SINE B4 10 95 -129 3 769 273 238 0 0 chr17 24165986 24166066 -71106585 + GA-rich Low_complexity Low_complexity 2 81 0 3 769 207 0 0 0 chr17 24166360 24166383 -71106268 + (CAGA)n Simple_repeat Simple_repeat 4 26 0 3 769 413 252 29 0 chr17 24166391 24166494 -71106157 + PB1D7 SINE Alu 1 106 -14 3 769 598 282 71 54 chr17 24166917 24167101 -71105550 + B4A SINE B4 48 234 -58 3 769 842 161 7 40 chr17 24167098 24167220 -71105431 + B1_Mur1 SINE Alu 1 123 -26 3 769 2251 180 79 40 chr17 24167220 24167700 -71104951 - RLTR19 LTR ERVK 0 499 1 3 769 842 161 7 40 chr17 24167700 24167726 -71104925 + B1_Mur1 SINE Alu 124 144 -5 3 769 467 287 82 99 chr17 24167726 24167789 -71104862 + B4 SINE B4 202 292 0 3 769 315 0 0 0 chr17 24167799 24167834 -71104817 + (CG)n Simple_repeat Simple_repeat 2 36 0 3 769 459 0 0 0 chr17 24167834 24167884 -71104767 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 769 1250 41 0 0 chr17 24168347 24168493 -71104158 + B1_Mus2 SINE Alu 2 147 0 4 769 185 0 40 0 chr17 24168702 24168727 -71103924 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 769 203 146 18 0 chr17 24168737 24168792 -71103859 + (TTTG)n Simple_repeat Simple_repeat 1 56 0 4 769 1190 42 7 0 chr17 24168792 24168935 -71103716 - B1_Mus2 SINE Alu 0 147 4 4 769 216 0 0 0 chr17 24169365 24169389 -71103262 + (CCCCG)n Simple_repeat Simple_repeat 1 24 0 4 769 478 306 41 0 chr17 24169608 24169729 -71102922 + B1F1 SINE Alu 2 127 -22 4 769 694 196 53 0 chr17 24169737 24169870 -71102781 + B1_Mur4 SINE Alu 1 140 -10 4 769 243 204 0 0 chr17 24169871 24169925 -71102726 + GA-rich Low_complexity Low_complexity 1 54 0 4 769 861 130 161 0 chr17 24169944 24170105 -71102546 + RMER10A LTR ERVL 2 188 -254 4 769 617 272 85 57 chr17 24170243 24170505 -71102146 + RMER10A LTR ERVL 152 421 -21 4 769 1634 42 0 0 chr17 24170505 24170698 -71101953 - B2_Mm1a SINE B2 0 193 1 4 769 617 272 85 57 chr17 24170698 24170716 -71101935 + RMER10A LTR ERVL 422 439 -3 4 769 183 80 0 0 chr17 24171253 24171278 -71101373 + (TTG)n Simple_repeat Simple_repeat 2 26 0 4 769 657 95 143 0 chr17 24171283 24171388 -71101263 - B1_Mur4 SINE Alu -8 142 23 4 769 549 0 0 0 chr17 24171597 24171658 -71100993 + (GA)n Simple_repeat Simple_repeat 2 62 0 4 769 325 239 15 0 chr17 24171884 24171951 -71100700 + B3A SINE B2 1 68 -130 4 769 378 0 0 0 chr17 24172407 24172449 -71100202 + (TGG)n Simple_repeat Simple_repeat 1 42 0 4 769 250 258 95 76 chr17 24172478 24172583 -71100068 - B1_Mur2 SINE Alu -1 148 42 4 769 204 0 0 156 chr17 24172586 24172682 -71099969 + (CTCTG)n Simple_repeat Simple_repeat 5 85 0 4 769 286 255 0 175 chr17 24172706 24172820 -71099831 - PB1D10 SINE Alu -1 116 23 4 769 328 141 72 72 chr17 24172876 24172945 -71099706 + B1F SINE Alu 79 147 -2 4 769 327 294 94 64 chr17 24172978 24173204 -71099447 - L1M5 LINE L1 -602 5522 5285 4 769 592 265 20 7 chr17 24173398 24173550 -71099101 + RSINE1 SINE B4 2 155 -10 4 769 258 32 0 0 chr17 24174648 24174679 -71097972 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 769 642 68 0 0 chr17 24174843 24174931 -71097720 + (TGAA)n Simple_repeat Simple_repeat 4 91 0 4 769 186 43 0 0 chr17 24175297 24175320 -71097331 + (CTG)n Simple_repeat Simple_repeat 2 24 0 4 769 494 70 0 14 chr17 24176518 24176590 -71096061 + (GGA)n Simple_repeat Simple_repeat 1 71 0 4 769 231 113 0 90 chr17 24176702 24176780 -71095871 + T-rich Low_complexity Low_complexity 5 75 0 4 769 389 120 0 12 chr17 24176801 24176885 -71095766 + (TCTG)n Simple_repeat Simple_repeat 4 86 0 4 769 240 161 321 0 chr17 24176952 24177008 -71095643 - B3A SINE B2 -121 77 4 4 769 899 265 56 10 chr17 24177018 24177216 -71095435 - B3 SINE B2 0 216 10 4 769 604 239 7 55 chr17 24177213 24177359 -71095292 - B1F SINE Alu -1 148 10 4 769 1059 251 80 96 chr17 24177541 24177906 -71094745 - MTE2a LTR MaLR 0 379 21 4 769 225 0 0 0 chr17 24179088 24179113 -71093538 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 769 1365 57 0 0 chr17 24179113 24179287 -71093364 + (GA)n Simple_repeat Simple_repeat 2 176 0 4 769 977 216 45 20 chr17 24180106 24180304 -71092347 + B3 SINE B2 7 209 -7 4 769 410 276 44 25 chr17 24180654 24180748 -71091903 - RSINE1 SINE B4 0 165 68 4 769 603 0 0 0 chr17 24180748 24180815 -71091836 + (TG)n Simple_repeat Simple_repeat 1 67 0 4 769 410 276 44 25 chr17 24180815 24180880 -71091771 - RSINE1 SINE B4 -98 67 4 4 769 394 234 23 37 chr17 24180968 24181087 -71091564 - MIR SINE MIR -82 180 67 4 769 924 179 158 5 chr17 24182023 24182219 -71090432 + URR1A DNA MER1_type 1 226 0 4 769 342 115 0 0 chr17 24182916 24182968 -71089683 + (A)n Simple_repeat Simple_repeat 1 52 0 4 769 821 216 0 33 chr17 24183534 24183687 -71088964 + B1_Mur1 SINE Alu 2 149 0 4 769 1261 54 0 0 chr17 24186484 24186631 -71086020 + B1_Mus2 SINE Alu 1 147 0 4 769 270 73 0 0 chr17 24186633 24186674 -71085977 + (A)n Simple_repeat Simple_repeat 1 41 0 4 769 236 0 0 83 chr17 24187022 24187070 -71085581 + (CTGGGG)n Simple_repeat Simple_repeat 1 44 0 4 769 374 292 26 34 chr17 24188208 24188325 -71084326 + PB1 SINE Alu 1 116 -11 4 769 545 212 35 9 chr17 24188358 24188472 -71084179 - PB1D9 SINE Alu -3 117 1 4 769 210 171 0 0 chr17 24188482 24188517 -71084134 + (TTA)n Simple_repeat Simple_repeat 1 35 0 4 769 332 304 132 7 chr17 24188525 24188661 -71083990 - RSINE1 SINE B4 -12 153 1 4 769 454 291 36 0 chr17 24188668 24188778 -71083873 - PB1D10 SINE Alu 0 117 4 4 769 1541 38 49 0 chr17 24188888 24189071 -71083580 + B2_Mm1t SINE B2 1 192 -1 4 769 754 185 36 15 chr17 24189084 24189221 -71083430 + B1_Mur1 SINE Alu 1 140 -9 4 769 180 311 62 75 chr17 24189247 24189393 -71083258 + L2 LINE L2 465 608 -2811 4 769 1183 82 0 0 chr17 24189531 24189677 -71082974 - B1_Mus2 SINE Alu 0 147 2 4 769 1410 85 0 0 chr17 24191372 24191532 -71081119 + B2_Mm1a SINE B2 1 160 -33 4 769 198 0 0 0 chr17 24191532 24191554 -71081097 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 4 769 1410 85 0 0 chr17 24191554 24191581 -71081070 + B2_Mm1a SINE B2 161 187 -6 4 769 180 0 0 0 chr17 24191581 24191601 -71081050 + (TA)n Simple_repeat Simple_repeat 2 21 0 4 769 448 219 102 55 chr17 24197341 24197474 -71075177 - B1F1 SINE Alu -4 146 1 4 769 259 318 188 7 chr17 24197474 24197503 -71075148 - B4 SINE B4 -185 107 52 4 769 1337 90 17 0 chr17 24197565 24197742 -71074909 + B2_Mm2 SINE B2 2 181 -14 4 769 207 0 0 0 chr17 24197753 24197776 -71074875 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 4 769 1226 58 0 0 chr17 24197776 24197930 -71074721 - B2_Mm2 SINE B2 -40 155 2 4 769 21 36 0 0 chr17 24197930 24197958 -71074693 + AT_rich Low_complexity Low_complexity 1 28 0 4 769 1528 231 50 62 chr17 24200725 24201109 -71071542 - MTD LTR MaLR -36 383 5 4 769 1086 196 19 10 chr17 24201110 24201316 -71071335 + B3 SINE B2 1 208 -8 4 769 795 193 27 7 chr17 24201329 24201475 -71071176 + B1_Mur4 SINE Alu 1 149 -1 4 769 763 169 73 11 chr17 24201506 24201697 -71070954 - MTC-int LTR MaLR 0 1258 1056 4 769 303 28 0 0 chr17 24202164 24202200 -71070451 + (TTA)n Simple_repeat Simple_repeat 2 37 0 4 769 483 274 18 28 chr17 24202200 24202309 -71070342 - PB1D9 SINE Alu -11 109 2 4 769 180 200 39 20 chr17 24203559 24203610 -71069041 - MIRc SINE MIR -101 167 116 4 769 201 39 0 0 chr17 24204656 24204682 -71067969 + (TC)n Simple_repeat Simple_repeat 2 27 0 4 769 1080 89 0 14 chr17 24204692 24204840 -71067811 - B1_Mus2 SINE Alu -1 146 1 4 769 885 214 124 5 chr17 24207721 24207914 -71064737 - B3 SINE B2 0 216 1 4 769 279 122 0 0 chr17 24207984 24208033 -71064618 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 769 942 88 86 22 chr17 24208110 24208249 -71064402 - B1_Mur3 SINE Alu -1 148 1 4 769 694 196 235 12 chr17 24208277 24208447 -71064204 - B3 SINE B2 -5 211 4 4 769 677 150 0 32 chr17 24208463 24208587 -71064064 - B1_Mus1 SINE Alu -1 147 28 4 769 384 256 53 43 chr17 24208582 24208676 -71063975 - RSINE1 SINE B4 -40 125 31 4 769 287 300 49 123 chr17 24212636 24212921 -71059730 + L1ME4a LINE L1 5679 5942 -182 4 769 290 309 0 0 chr17 24212922 24213003 -71059648 + ID2 SINE ID 2 82 -1 4 769 513 0 0 0 chr17 24213622 24213679 -71058972 + (CA)n Simple_repeat Simple_repeat 1 57 0 4 769 193 117 83 0 chr17 24217675 24217735 -71054916 + (CAT)n Simple_repeat Simple_repeat 1 65 0 4 769 558 211 81 22 chr17 24217735 24217890 -71054761 + ID_B1 SINE B4 75 224 0 4 769 183 188 104 0 chr17 24218199 24218247 -71054404 + L3 LINE CR1 794 846 -3643 4 769 475 216 34 61 chr17 24218505 24218627 -71054024 - B3 SINE B2 0 216 99 4 769 1024 88 7 0 chr17 24218627 24218763 -71053888 + B2_Mm1t SINE B2 1 137 -56 4 769 318 155 13 34 chr17 24218786 24218859 -71053792 + B2_Mm2 SINE B2 47 121 -95 4 769 531 0 0 0 chr17 24218865 24218924 -71053727 + (TAAA)n Simple_repeat Simple_repeat 3 61 0 4 769 529 194 40 10 chr17 24218940 24219039 -71053612 - B3 SINE B2 -111 105 4 4 769 305 298 154 0 chr17 24219179 24219283 -71053368 - B1F2 SINE Alu -29 120 1 4 769 974 97 0 94 chr17 24219312 24219472 -71053179 + B1_Mus1 SINE Alu 2 146 -2 4 769 239 273 0 0 chr17 24219543 24219587 -71053064 + RSINE1 SINE B4 118 161 -4 4 769 230 0 33 0 chr17 24220170 24220200 -71052451 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 769 1754 174 135 6 chr17 24220216 24220556 -71052095 + ORR1C2 LTR MaLR 1 384 0 4 769 689 326 93 0 chr17 24220576 24220748 -71051903 - B3 SINE B2 -28 188 1 4 769 663 243 181 6 chr17 24220748 24220916 -71051735 - B4A SINE B4 -84 208 9 4 769 881 279 87 29 chr17 24220951 24221398 -71051253 - Charlie1 DNA MER1_type -2238 543 71 4 769 835 147 102 7 chr17 24221466 24221603 -71051048 - B1_Mur4 SINE Alu 0 150 1 4 769 671 229 88 24 chr17 24221894 24222144 -71050507 + L1_Rod LINE L1 5143 5408 -439 4 769 650 176 23 39 chr17 24222166 24222296 -71050355 + B1_Mur4 SINE Alu 2 129 -21 4 769 418 265 90 70 chr17 24222300 24222366 -71050285 + L1M1 LINE L1 5522 5588 -715 4 769 564 278 22 11 chr17 24222366 24222544 -71050107 + B3A SINE B2 1 180 -18 5 769 180 0 0 0 chr17 24222546 24222566 -71050085 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 769 446 264 81 5 chr17 24222566 24222752 -71049899 + L1M1 LINE L1 5589 5782 -521 4 769 298 333 120 0 chr17 24222756 24222873 -71049778 + B1F SINE Alu 11 141 -8 5 769 333 0 0 0 chr17 24222931 24222968 -71049683 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 769 449 128 366 27 chr17 24223124 24223236 -71049415 + B1_Mur4 SINE Alu 1 150 0 5 769 578 213 43 54 chr17 24223403 24223587 -71049064 + B3A SINE B2 1 182 -16 5 769 348 24 0 0 chr17 24223587 24223628 -71049023 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 769 486 0 0 0 chr17 24223690 24223744 -71048907 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 769 277 174 43 14 chr17 24224108 24224178 -71048473 + Lx8 LINE L1 7400 7471 -2 5 769 535 221 5 0 chr17 24224241 24224353 -71048298 + B1_Mur2 SINE Alu 1 116 -4 5 769 344 331 56 42 chr17 24224353 24224378 -71048273 + B4 SINE B4 86 224 -68 5 769 318 148 0 0 chr17 24224507 24224561 -71048090 + (TATG)n Simple_repeat Simple_repeat 2 55 0 5 769 182 137 20 0 chr17 24224572 24224587 -71048064 + T-rich Low_complexity Low_complexity 39 53 0 5 769 1128 89 0 0 chr17 24224587 24224733 -71047918 - B1_Mus1 SINE Alu 0 148 3 5 769 182 137 20 0 chr17 24224733 24224768 -71047883 + T-rich Low_complexity Low_complexity 3 38 0 5 769 1145 35 28 14 chr17 24225623 24225768 -71046883 + B1_Mus2 SINE Alu 1 147 0 5 769 216 217 16 32 chr17 24227098 24227160 -71045491 - PB1D10 SINE Alu -1 116 56 5 769 186 133 0 0 chr17 24227213 24227243 -71045408 + (TCCA)n Simple_repeat Simple_repeat 3 32 0 5 769 207 161 0 0 chr17 24227256 24227287 -71045364 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 5 769 717 259 12 6 chr17 24227287 24227454 -71045197 - B3 SINE B2 -48 168 1 5 769 239 188 0 0 chr17 24227454 24227499 -71045152 - B1F SINE Alu -49 68 24 5 769 373 191 32 0 chr17 24228946 24229040 -71043611 + GA-rich Low_complexity Low_complexity 8 104 0 5 769 1061 70 21 7 chr17 24229161 24229305 -71043346 + B1_Mm SINE Alu 1 146 -1 5 769 329 239 14 0 chr17 24229379 24229446 -71043205 + B1_Mur4 SINE Alu 43 110 -40 5 769 320 277 25 67 chr17 24229446 24229566 -71043085 + PB1D10 SINE Alu 3 117 0 5 769 990 219 19 19 chr17 24231077 24231287 -71041364 - B3 SINE B2 -5 211 2 5 769 871 49 187 0 chr17 24231376 24231499 -71041152 + B1_Mus2 SINE Alu 2 147 0 5 769 1270 82 47 32 chr17 24232084 24232274 -71040377 + B2_Mm1t SINE B2 1 193 0 5 769 213 39 0 0 chr17 24232742 24232768 -71039883 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 5 769 1221 7 0 70 chr17 24232769 24234079 -71038572 + (TGGA)n Simple_repeat Simple_repeat 1 1218 0 5 769 925 254 14 0 chr17 24234097 24234310 -71038341 + B3 SINE B2 1 216 0 5 769 658 218 24 0 chr17 24234694 24234818 -71037833 - B1_Mur1 SINE Alu -18 131 5 5 769 331 302 8 33 chr17 24234824 24234944 -71037707 - PB1D10 SINE Alu 0 117 1 5 769 1703 16 5 0 chr17 24235863 24236054 -71036597 + B2_Mm1t SINE B2 2 193 0 5 769 1229 48 0 0 chr17 24236250 24236397 -71036254 - B1_Mus2 SINE Alu 0 147 1 5 769 2048 180 91 0 chr17 24239712 24240096 -71032555 + MTD LTR MaLR 1 419 0 5 769 187 284 119 0 chr17 24240425 24240492 -71032159 - MIRm SINE MIR -156 120 46 5 769 299 54 0 0 chr17 24241644 24241681 -71030970 - Lx2B LINE L1 -627 6373 6337 5 769 798 56 0 0 chr17 24241726 24241833 -71030818 + B1_Mus2 SINE Alu 41 147 0 5 769 24 0 0 0 chr17 24241861 24241885 -71030766 + AT_rich Low_complexity Low_complexity 1 24 0 5 769 450 192 221 0 chr17 24243033 24243137 -71029514 + B1_Mm SINE Alu 5 131 -16 5 769 180 0 0 0 chr17 24244624 24244644 -71028007 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 5 769 933 162 14 0 chr17 24244728 24244876 -71027775 + B1_Mur4 SINE Alu 1 150 0 5 769 225 0 0 0 chr17 24245594 24245619 -71027032 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 769 641 188 96 52 chr17 24245728 24245863 -71026788 - B1_Mus2 SINE Alu -6 141 1 5 769 445 308 15 0 chr17 24246639 24246769 -71025882 + B1_Mur1 SINE Alu 1 132 -17 5 769 207 0 0 0 chr17 24246789 24246812 -71025839 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 769 1271 97 49 0 chr17 24246853 24247038 -71025613 + B2_Mm2 SINE B2 2 195 0 5 769 304 297 35 18 chr17 24247495 24247608 -71025043 - PB1 SINE Alu 0 127 13 5 770 334 268 144 0 chr17 24248541 24248638 -71024013 + PB1D10 SINE Alu 1 111 -6 5 770 263 292 14 0 chr17 24248785 24248857 -71023794 + B4 SINE B4 13 85 -207 5 770 298 315 58 117 chr17 24248862 24249085 -71023566 + B4 SINE B4 2 211 -81 5 770 282 56 0 0 chr17 24249089 24249125 -71023526 + (ATTG)n Simple_repeat Simple_repeat 3 38 0 5 770 419 191 25 110 chr17 24249227 24249242 -71023409 + MT2B LTR ERVL 151 155 -446 5 770 918 150 7 0 chr17 24249242 24249389 -71023262 + B1_Mus1 SINE Alu 1 148 0 5 770 363 208 0 14 chr17 24249491 24249564 -71023087 + ID4_ SINE ID 12 83 0 5 770 243 200 55 0 chr17 24249762 24249817 -71022834 + CT-rich Low_complexity Low_complexity 2 59 0 5 770 1180 63 0 0 chr17 24250377 24250520 -71022131 + B1_Mus2 SINE Alu 2 144 -3 5 770 531 0 0 0 chr17 24250520 24250579 -71022072 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 5 770 369 299 54 70 chr17 24250803 24251095 -71021556 + B4A SINE B4 8 291 -1 5 770 201 147 0 0 chr17 24251098 24251132 -71021519 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 770 21 36 0 0 chr17 24251132 24251160 -71021491 + AT_rich Low_complexity Low_complexity 1 28 0 5 770 211 167 0 27 chr17 24251594 24251631 -71021020 + ID4_ SINE ID 7 42 -41 5 770 680 202 32 8 chr17 24251893 24252018 -71020633 + B1_Mur1 SINE Alu 1 128 -21 5 770 711 94 38 0 chr17 24252031 24252137 -71020514 + B1_Mus1 SINE Alu 2 111 -37 5 770 276 190 52 0 chr17 24252211 24252269 -71020382 - PB1 SINE Alu -1 126 66 5 770 193 140 39 39 chr17 24252317 24252369 -71020282 + CT-rich Low_complexity Low_complexity 2 53 0 5 770 638 203 17 8 chr17 24252385 24252504 -71020147 - B1_Mus2 SINE Alu -27 120 1 5 770 23 0 0 29 chr17 24252505 24252526 -71020125 + AT_rich Low_complexity Low_complexity 1 21 0 5 770 1170 57 0 0 chr17 24252526 24252666 -71019985 - B1_Mus1 SINE Alu -7 141 2 5 770 23 0 0 29 chr17 24252666 24252678 -71019973 + AT_rich Low_complexity Low_complexity 1 12 0 5 770 256 237 0 0 chr17 24252781 24252840 -71019811 - ID4_ SINE ID -13 70 12 5 770 1027 134 12 0 chr17 24254165 24254329 -71018322 + B2_Mm2 SINE B2 1 166 -29 5 770 280 272 69 39 chr17 24254733 24254863 -71017788 - MER20 DNA MER1_type -21 198 65 5 770 447 349 0 32 chr17 24254996 24255150 -71017501 + B3 SINE B2 34 182 -34 5 770 1028 203 30 15 chr17 24255182 24255382 -71017269 - B3 SINE B2 -10 206 4 5 770 32 26 0 0 chr17 24255387 24255426 -71017225 + AT_rich Low_complexity Low_complexity 1 39 0 5 770 446 191 8 87 chr17 24255435 24255558 -71017093 + B1_Mur1 SINE Alu 35 142 -7 5 770 198 103 0 0 chr17 24255569 24255598 -71017053 + (TAGA)n Simple_repeat Simple_repeat 4 32 0 5 770 1565 43 21 0 chr17 24255620 24255807 -71016844 - B2_Mm1a SINE B2 -1 192 2 5 770 466 224 94 8 chr17 24256910 24257027 -71015624 + B1_Mur2 SINE Alu 23 149 0 5 770 240 111 0 0 chr17 24257027 24257063 -71015588 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 5 770 821 209 141 21 chr17 24257073 24257264 -71015387 + B3 SINE B2 3 216 0 5 770 1212 61 0 0 chr17 24257266 24257413 -71015238 + B1_Mus1 SINE Alu 1 147 -1 5 770 913 163 20 0 chr17 24257477 24257624 -71015027 + B1_Mur4 SINE Alu 1 150 0 5 770 569 248 8 15 chr17 24257685 24257816 -71014835 + B1_Mus2 SINE Alu 1 130 -17 5 770 285 185 0 0 chr17 24257846 24257911 -71014740 + GA-rich Low_complexity Low_complexity 3 67 0 5 770 653 202 16 31 chr17 24258135 24258263 -71014388 + RSINE1 SINE B4 3 128 -37 5 770 236 30 0 29 chr17 24258700 24258734 -71013917 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 5 770 664 178 0 25 chr17 24258734 24258845 -71013806 - PB1D9 SINE Alu -9 111 3 5 770 939 226 21 0 chr17 24258883 24259073 -71013578 + B3 SINE B2 1 194 -22 5 770 613 234 14 41 chr17 24259533 24259563 -71013088 + B1_Mur1 SINE Alu 2 31 -118 5 770 2815 124 103 30 chr17 24259563 24259782 -71012869 + RLTR19 LTR ERVK 1 246 -253 5 770 1369 64 16 31 chr17 24259782 24259976 -71012675 - B2_Mm2 SINE B2 -4 191 1 5 770 2815 124 103 30 chr17 24259976 24260221 -71012430 + RLTR19 LTR ERVK 247 499 0 5 770 613 234 14 41 chr17 24260221 24260337 -71012314 + B1_Mur1 SINE Alu 32 144 -5 5 770 892 222 58 15 chr17 24260889 24261095 -71011556 + B3 SINE B2 2 216 0 5 770 462 18 0 0 chr17 24261625 24261680 -71010971 + (TC)n Simple_repeat Simple_repeat 1 55 0 5 770 1365 87 16 0 chr17 24262117 24262302 -71010349 + B2_Mm2 SINE B2 1 188 -7 5 770 1005 247 41 41 chr17 24262849 24263140 -71009511 - B4A SINE B4 0 292 2 5 770 1248 150 19 0 chr17 24263174 24263387 -71009264 + URR1A DNA MER1_type 10 226 0 5 770 278 290 18 18 chr17 24263508 24263617 -71009034 + PB1D10 SINE Alu 6 114 -3 5 770 252 295 67 11 chr17 24263653 24263742 -71008909 + B1F SINE Alu 50 143 -6 5 770 519 262 59 26 chr17 24264010 24264163 -71008488 + RSINE1 SINE B4 4 161 -4 5 770 722 191 38 8 chr17 24264239 24264371 -71008280 - B1_Mm SINE Alu -11 136 1 6 770 25 0 0 0 chr17 24264371 24264396 -71008255 + AT_rich Low_complexity Low_complexity 1 25 0 6 770 252 0 0 0 chr17 24264588 24264616 -71008035 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 6 770 963 136 57 47 chr17 24264798 24264991 -71007660 + B2_Mm2 SINE B2 1 195 0 6 770 709 194 14 143 chr17 24265017 24265234 -71007417 + B2_Mm2 SINE B2 2 190 -5 6 770 492 217 93 53 chr17 24265234 24265385 -71007266 + L1MD3 LINE L1 7596 7752 -243 6 770 534 203 66 22 chr17 24265537 24265673 -71006978 - B1_Mur2 SINE Alu -7 142 1 6 770 212 219 0 0 chr17 24265698 24265739 -71006912 - RSINE1 SINE B4 -42 123 83 6 770 21 57 0 0 chr17 24265773 24265808 -71006843 + AT_rich Low_complexity Low_complexity 1 35 0 6 770 296 149 103 15 chr17 24265992 24266060 -71006591 - PB1D10 SINE Alu -26 91 18 6 770 441 0 0 0 chr17 24266095 24266144 -71006507 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 770 219 312 141 0 chr17 24266164 24266228 -71006423 - B3 SINE B2 -143 73 1 6 770 202 220 0 0 chr17 24266236 24266286 -71006365 + T-rich Low_complexity Low_complexity 1 50 0 6 770 716 139 34 81 chr17 24266292 24266441 -71006210 - B1_Mur3 SINE Alu -6 143 2 6 770 225 0 0 0 chr17 24266446 24266471 -71006180 + (T)n Simple_repeat Simple_repeat 1 25 0 6 770 1189 54 0 13 chr17 24266471 24266620 -71006031 - B1_Mus2 SINE Alu 0 147 1 6 770 733 269 112 38 chr17 24268990 24269257 -71003394 + B4A SINE B4 6 292 0 6 770 1170 62 7 0 chr17 24269276 24269422 -71003229 + B1_Mus2 SINE Alu 1 147 0 6 770 1238 87 35 0 chr17 24269461 24269634 -71003017 - B2_Mm1t SINE B2 -13 180 2 6 770 276 338 3 11 chr17 24269702 24269800 -71002851 - B1F1 SINE Alu -28 99 5 6 770 228 338 0 29 chr17 24269742 24269812 -71002839 - ID_B1 SINE B4 -81 143 76 6 770 1396 85 11 0 chr17 24269986 24270175 -71002476 - B2_Mm1t SINE B2 -2 191 1 6 770 789 118 24 0 chr17 24270178 24270305 -71002346 - B1_Mur3 SINE Alu 0 149 20 6 770 403 122 40 109 chr17 24270219 24270320 -71002331 - MT2B LTR ERVL -343 258 165 6 770 343 309 0 40 chr17 24270331 24270432 -71002219 + L1MC3 LINE L1 7285 7381 -404 6 770 303 93 0 0 chr17 24270498 24270541 -71002110 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 6 770 350 190 475 25 chr17 24270613 24270735 -71001916 + B4A SINE B4 55 231 -61 6 770 639 237 153 0 chr17 24270742 24270983 -71001668 + B4A SINE B4 10 287 -5 6 770 232 259 11 66 chr17 24271073 24271164 -71001487 + GA-rich Low_complexity Low_complexity 2 87 0 6 770 802 243 83 40 chr17 24271166 24271444 -71001207 + B4 SINE B4 3 292 0 6 770 336 260 9 57 chr17 24271465 24271571 -71001080 + PB1D10 SINE Alu 9 109 -8 6 770 732 183 35 0 chr17 24271580 24271722 -71000929 + B1_Mus1 SINE Alu 1 147 -1 6 770 214 70 44 44 chr17 24272152 24272197 -71000454 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 6 770 1193 68 0 0 chr17 24272391 24272538 -71000113 + B1_Mus2 SINE Alu 1 147 0 6 770 227 183 0 48 chr17 24272843 24272857 -70999794 + A-rich Low_complexity Low_complexity 1 14 0 6 770 1230 41 0 0 chr17 24272857 24273003 -70999648 + B1_Mus2 SINE Alu 1 146 -1 6 770 227 183 0 48 chr17 24273003 24273051 -70999600 + A-rich Low_complexity Low_complexity 15 60 0 6 770 815 168 0 8 chr17 24273554 24273686 -70998965 + B1_Mur2 SINE Alu 9 139 -10 6 770 291 233 11 65 chr17 24273730 24273822 -70998829 - PB1 SINE Alu -2 125 39 6 770 689 184 151 0 chr17 24273869 24274021 -70998630 - B3 SINE B2 -10 206 32 6 770 21 0 0 0 chr17 24274096 24274117 -70998534 + AT_rich Low_complexity Low_complexity 1 21 0 6 770 921 144 230 0 chr17 24274839 24275013 -70997638 + B3 SINE B2 3 216 0 6 770 23 0 0 0 chr17 24275015 24275038 -70997613 + AT_rich Low_complexity Low_complexity 1 23 0 6 770 603 283 73 37 chr17 24275041 24275232 -70997419 + B3A SINE B2 17 214 -2 6 770 462 240 81 14 chr17 24275384 24275522 -70997129 + B3A SINE B2 40 188 -10 6 770 674 194 13 73 chr17 24275522 24275672 -70996979 - B1_Mus2 SINE Alu -6 141 1 6 770 241 111 0 0 chr17 24275704 24275740 -70996911 + B2_Mm2 SINE B2 21 56 -139 6 770 244 217 0 77 chr17 24275844 24275909 -70996742 + RLTR25B LTR ERVK 440 499 -529 6 770 455 204 32 21 chr17 24275856 24275951 -70996700 + B1_Mur1 SINE Alu 49 144 -5 6 770 261 182 80 3 chr17 24276423 24276505 -70996146 + MIRb SINE MIR 83 172 -96 6 770 370 273 84 21 chr17 24277275 24277417 -70995234 + Charlie4z DNA MER1_type 2 152 -15 6 770 273 250 0 14 chr17 24277532 24277601 -70995050 - ID4 SINE ID -14 69 2 6 770 22 56 0 0 chr17 24278291 24278327 -70994324 + GC_rich Low_complexity Low_complexity 1 36 0 6 770 28 61 0 0 chr17 24278534 24278583 -70994068 + GC_rich Low_complexity Low_complexity 1 49 0 6 770 355 221 56 0 chr17 24279032 24279136 -70993515 - B1F SINE Alu 0 120 12 6 770 481 267 102 88 chr17 24279247 24279473 -70993178 - B4A SINE B4 -62 230 2 6 770 247 196 22 0 chr17 24279481 24279527 -70993124 - ID4_ SINE ID 0 83 37 6 770 584 229 30 0 chr17 24279590 24279721 -70992930 - B1F1 SINE Alu -4 145 11 6 770 259 140 100 0 chr17 24279754 24279804 -70992847 + Lx8 LINE L1 6895 6949 -524 6 770 307 157 323 43 chr17 24279805 24279898 -70992753 + PB1D9 SINE Alu 1 119 -1 6 770 1009 268 140 3 chr17 24279909 24280265 -70992386 + Lx8 LINE L1 6935 7339 -134 6 770 272 140 51 34 chr17 24280338 24280397 -70992254 + PB1D10 SINE Alu 53 112 -5 6 770 203 152 0 0 chr17 24280576 24280609 -70992042 - MIR SINE MIR -117 145 113 6 770 1416 58 16 5 chr17 24280751 24280941 -70991710 + B2_Mm2 SINE B2 1 192 -3 6 770 1058 72 0 0 chr17 24280942 24281080 -70991571 + B1_Mus1 SINE Alu 2 139 -9 6 770 522 0 0 0 chr17 24281080 24281138 -70991513 + (TAAA)n Simple_repeat Simple_repeat 2 59 0 6 770 325 306 74 0 chr17 24281146 24281254 -70991397 + B4A SINE B4 8 123 -169 6 770 374 325 71 0 chr17 24281303 24281429 -70991222 + RSINE1 SINE B4 14 148 -17 6 770 736 190 136 37 chr17 24281445 24281636 -70991015 - B3 SINE B2 -2 214 5 6 770 305 212 0 5 chr17 24281645 24281707 -70990944 + PB1D9 SINE Alu 60 127 0 6 770 294 29 0 0 chr17 24281707 24281742 -70990909 + (GA)n Simple_repeat Simple_repeat 2 36 0 6 770 513 104 0 0 chr17 24281801 24281878 -70990773 + (GA)n Simple_repeat Simple_repeat 2 78 0 6 770 1047 57 7 0 chr17 24282769 24282909 -70989742 - B1_Mm SINE Alu 0 147 7 6 770 456 213 30 95 chr17 24282795 24282959 -70989692 - MT2B LTR ERVL -306 278 125 6 770 709 125 0 77 chr17 24282995 24283125 -70989526 - B1_Mus2 SINE Alu -1 146 27 6 770 393 127 0 0 chr17 24283212 24283291 -70989360 + (GA)n Simple_repeat Simple_repeat 1 79 0 6 770 452 184 21 113 chr17 24283291 24283432 -70989219 + HAL1 LINE L1 1678 1805 -702 6 770 293 299 130 26 chr17 24283448 24283640 -70989011 - L2a LINE L2 -5 3421 3210 6 770 215 31 0 30 chr17 24283787 24283820 -70988831 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6 770 1162 49 0 0 chr17 24283847 24283991 -70988660 + B1_Mus1 SINE Alu 5 148 0 6 770 234 0 0 0 chr17 24284264 24284290 -70988361 + (T)n Simple_repeat Simple_repeat 1 26 0 6 770 275 208 0 0 chr17 24284292 24284340 -70988311 - B1_Mus2 SINE Alu -98 49 2 6 770 251 264 0 0 chr17 24284297 24284350 -70988301 - ID_B1 SINE B4 -99 125 73 6 770 563 214 152 21 chr17 24284374 24284565 -70988086 - B3 SINE B2 0 216 1 6 770 227 342 0 0 chr17 24284753 24284829 -70987822 - ID2 SINE ID -6 77 2 6 770 204 40 0 0 chr17 24284967 24284992 -70987659 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 770 279 0 0 0 chr17 24284992 24285022 -70987629 + (CATA)n Simple_repeat Simple_repeat 3 33 0 6 770 689 150 0 0 chr17 24285053 24285166 -70987485 + B1_Mus2 SINE Alu 35 147 0 6 770 256 304 72 0 chr17 24285252 24285321 -70987330 + ID4_ SINE ID 2 75 -8 6 770 1120 124 22 6 chr17 24285321 24285499 -70987152 + B2_Mm2 SINE B2 2 183 -12 6 770 295 129 28 20 chr17 24285544 24285650 -70987001 + B2_Mm2 SINE B2 47 189 -6 6 770 324 383 73 12 chr17 24285760 24285924 -70986727 + B4 SINE B4 117 290 -2 6 770 544 214 20 60 chr17 24286052 24286201 -70986450 + B1_Mur4 SINE Alu 7 149 -1 6 770 390 240 248 30 chr17 24286272 24286405 -70986246 + RSINE1 SINE B4 4 165 0 6 770 233 266 15 15 chr17 24286468 24286533 -70986118 + ID4_ SINE ID 16 80 -3 6 770 398 338 27 7 chr17 24286475 24286624 -70986027 + ID_B1 SINE B4 24 175 -49 6 770 442 291 111 0 chr17 24286798 24286915 -70985736 - B1_Mur1 SINE Alu -2 147 18 6 770 519 17 0 0 chr17 24286924 24286984 -70985667 + (TATG)n Simple_repeat Simple_repeat 2 61 0 6 770 1252 80 34 6 chr17 24286984 24287161 -70985490 - B2_Mm2 SINE B2 -12 183 2 6 770 237 267 33 16 chr17 24287346 24287407 -70985244 + B4A SINE B4 9 70 -222 6 770 555 211 82 17 chr17 24287414 24287569 -70985082 + B3A SINE B2 42 203 -13 6 770 304 253 9 120 chr17 24288290 24288398 -70984253 + ID_B1 SINE B4 129 224 0 6 770 410 123 0 22 chr17 24288693 24288783 -70983868 - B1_Mm SINE Alu 0 147 33 6 770 764 189 105 45 chr17 24289744 24289944 -70982707 + B3 SINE B2 1 212 -4 7 770 341 274 75 57 chr17 24289960 24290127 -70982524 + B3A SINE B2 1 184 -11 7 770 303 261 193 0 chr17 24290169 24290257 -70982394 + B3A SINE B2 50 154 -44 7 770 23 0 0 0 chr17 24290315 24290338 -70982313 + AT_rich Low_complexity Low_complexity 1 23 0 7 770 576 170 125 0 chr17 24290339 24290451 -70982200 - B1_Mur4 SINE Alu -5 145 20 7 770 351 288 118 22 chr17 24290340 24290475 -70982176 - B4 SINE B4 -72 220 73 7 770 347 247 86 0 chr17 24290495 24290588 -70982063 + ID_B1 SINE B4 6 106 -118 7 770 427 266 43 34 chr17 24290657 24290774 -70981877 - ID_B1 SINE B4 -31 193 76 7 770 513 280 79 42 chr17 24290794 24290984 -70981667 - B3A SINE B2 -1 197 1 7 770 946 133 0 14 chr17 24291007 24291152 -70981499 - B1_Mus1 SINE Alu -1 147 5 7 770 237 328 0 0 chr17 24291422 24291486 -70981165 - tRNA-Ala-GCY_ tRNA tRNA -8 67 4 7 770 247 226 0 61 chr17 24293295 24293361 -70979290 + B1_Mur1 SINE Alu 87 148 -1 7 770 363 170 97 123 chr17 24293378 24293492 -70979159 + RSINE1 SINE B4 5 115 -50 7 770 1279 98 5 5 chr17 24296273 24296467 -70976184 + MTB_Mm LTR MaLR 1 194 -213 7 770 994 39 85 0 chr17 24296467 24296597 -70976054 + B1_Mus2 SINE Alu 1 141 -6 7 770 276 243 43 0 chr17 24296666 24296736 -70975915 + PB1 SINE Alu 53 125 -2 7 770 310 266 0 25 chr17 24296766 24296847 -70975804 + ID4_ SINE ID 1 79 -4 7 770 1146 55 7 0 chr17 24296881 24297026 -70975625 - B1_Mus2 SINE Alu 0 147 2 7 770 685 225 74 17 chr17 24297031 24297207 -70975444 - B3 SINE B2 -11 205 20 7 770 784 191 7 7 chr17 24297278 24297418 -70975233 + B1_Mur3 SINE Alu 1 141 -8 7 770 255 61 0 0 chr17 24297418 24297451 -70975200 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 7 770 366 221 13 25 chr17 24297463 24297542 -70975109 + B3A SINE B2 3 80 -118 7 770 225 0 0 0 chr17 24297751 24297776 -70974875 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 7 770 568 270 12 50 chr17 24297779 24297939 -70974712 + RSINE1 SINE B4 8 161 -4 7 770 204 111 0 0 chr17 24297951 24297987 -70974664 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 770 1187 41 0 0 chr17 24299336 24299482 -70973169 + B1_Mm SINE Alu 1 146 -1 7 770 183 80 0 0 chr17 24305353 24305378 -70967273 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 7 770 24 0 0 0 chr17 24305836 24305860 -70966791 + GC_rich Low_complexity Low_complexity 1 24 0 7 770 323 229 0 0 chr17 24307087 24307148 -70965503 - B1_Mur1 SINE Alu -7 142 82 7 770 693 266 6 0 chr17 24307938 24308096 -70964555 - B3 SINE B2 -57 159 1 7 770 534 129 21 0 chr17 24308144 24308237 -70964414 - PB1D9 SINE Alu 0 120 26 7 770 298 214 259 0 chr17 24308149 24308261 -70964390 - B4 SINE B4 -71 221 81 7 770 184 200 0 28 chr17 24308554 24308590 -70964061 - L2b LINE L2 -24 3351 3317 7 770 207 350 10 20 chr17 24309126 24309138 -70963513 + polypurine Low_complexity Low_complexity 3 14 0 7 770 366 269 46 9 chr17 24309138 24309247 -70963404 + PB1D10 SINE Alu 3 115 -2 7 770 207 350 10 20 chr17 24309247 24309336 -70963315 + GA-rich Low_complexity Low_complexity 15 103 0 7 770 1217 41 0 0 chr17 24309560 24309707 -70962944 - B1_Mus1 SINE Alu 0 148 2 7 770 22 0 0 0 chr17 24309719 24309741 -70962910 + AT_rich Low_complexity Low_complexity 1 22 0 7 770 307 318 34 0 chr17 24309755 24309843 -70962808 + PB1D10 SINE Alu 1 91 -26 7 770 653 229 152 5 chr17 24309960 24310144 -70962507 + B3 SINE B2 2 212 -4 7 770 735 199 7 7 chr17 24310155 24310297 -70962354 + B1_Mur2 SINE Alu 8 149 0 7 770 831 135 35 7 chr17 24310868 24311010 -70961641 + B1_Mus2 SINE Alu 2 147 0 7 770 361 173 13 26 chr17 24311096 24311173 -70961478 - PB1D10 SINE Alu -28 89 14 7 770 326 233 140 52 chr17 24311820 24311956 -70960695 + B1_Mur4 SINE Alu 2 150 0 7 770 1438 47 16 5 chr17 24312555 24312748 -70959903 - B2_Mm2 SINE B2 0 195 1 7 770 471 253 42 38 chr17 24312751 24312882 -70959769 - B1F SINE Alu 0 149 17 7 770 1157 35 0 20 chr17 24313014 24313162 -70959489 - B1_Mm SINE Alu -2 145 1 7 770 922 208 16 0 chr17 24313170 24313353 -70959298 - B3 SINE B2 -2 214 29 7 770 721 159 0 0 chr17 24313369 24313482 -70959169 - B1_Mus2 SINE Alu -12 135 23 7 770 422 263 93 0 chr17 24313898 24314016 -70958635 - ID_B1 SINE B4 -2 222 94 7 770 809 228 69 0 chr17 24314361 24314563 -70958088 - B3 SINE B2 0 216 1 7 770 480 35 0 0 chr17 24314568 24314626 -70958025 + (TATG)n Simple_repeat Simple_repeat 2 59 0 7 770 722 216 14 0 chr17 24314639 24314778 -70957873 - B1F2 SINE Alu -3 146 6 7 770 293 336 40 93 chr17 24314643 24314794 -70957857 - B4 SINE B4 -73 219 77 7 770 407 244 0 0 chr17 24314880 24314958 -70957693 + ID4_ SINE ID 2 79 -4 7 770 820 131 66 0 chr17 24315177 24315314 -70957337 + B1_Mur4 SINE Alu 5 150 0 7 770 616 127 0 18 chr17 24315318 24315430 -70957221 + (TA)n Simple_repeat Simple_repeat 2 111 0 7 770 477 259 20 88 chr17 24315490 24315638 -70957013 + ID_B1 SINE B4 83 220 -4 7 770 444 222 73 18 chr17 24316303 24316413 -70956238 + B1F SINE Alu 16 131 -18 7 770 300 120 0 0 chr17 24321127 24321177 -70951474 + (CAGA)n Simple_repeat Simple_repeat 2 51 0 7 770 225 0 0 0 chr17 24321862 24321887 -70950764 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 770 721 194 0 11 chr17 24321922 24322104 -70950547 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 770 572 289 48 5 chr17 24323484 24323672 -70948979 + B3A SINE B2 2 197 -1 7 770 833 199 0 0 chr17 24323699 24323845 -70948806 - B1_Mur3 SINE Alu 0 149 4 7 770 1559 42 0 0 chr17 24323853 24324043 -70948608 - B2_Mm1a SINE B2 -2 191 2 7 770 1144 181 24 0 chr17 24324071 24324281 -70948370 - B3 SINE B2 -1 215 1 7 770 1059 88 0 13 chr17 24324334 24324483 -70948168 + B1_Mus1 SINE Alu 1 147 -1 7 770 1439 58 5 0 chr17 24324494 24324684 -70947967 + B2_Mm1a SINE B2 1 191 -2 7 770 1005 39 0 8 chr17 24324688 24324816 -70947835 + B1_Mus2 SINE Alu 2 128 -19 7 770 306 297 57 21 chr17 24325134 24325275 -70947376 + B1F SINE Alu 1 146 -3 7 770 1227 27 0 0 chr17 24325334 24325480 -70947171 - B1_Mus2 SINE Alu 0 147 2 7 770 874 229 11 22 chr17 24325480 24325663 -70946988 + B3 SINE B2 31 211 -5 7 770 926 117 7 20 chr17 24325687 24325835 -70946816 + B1_Mm SINE Alu 1 146 -1 7 770 441 0 0 0 chr17 24325841 24325890 -70946761 + (CAGA)n Simple_repeat Simple_repeat 4 52 0 7 770 342 222 14 50 chr17 24325910 24326023 -70946628 + B1F1 SINE Alu 2 147 -2 7 770 850 212 25 3 chr17 24326024 24326196 -70946455 + Lx9 LINE L1 7302 7518 -126 7 770 447 19 0 0 chr17 24326196 24326248 -70946403 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 770 276 171 207 33 chr17 24326248 24326352 -70946299 + Lx9 LINE L1 7519 7644 0 7 770 21 36 0 0 chr17 24326352 24326380 -70946271 + AT_rich Low_complexity Low_complexity 1 28 0 7 770 1084 62 0 14 chr17 24326390 24326538 -70946113 + B1_Mm SINE Alu 2 147 0 7 770 246 323 15 0 chr17 24326635 24326700 -70945951 + ID SINE ID 8 73 -151 7 770 249 347 42 0 chr17 24326642 24326737 -70945914 + BC1_Mm scRNA scRNA 15 113 -39 7 770 401 200 200 0 chr17 24327054 24327149 -70945502 - PB1D9 SINE Alu -6 114 1 7 770 387 286 119 73 chr17 24327291 24327551 -70945100 - B4 SINE B4 -20 272 1 7 770 1109 183 20 5 chr17 24327578 24327781 -70944870 + B3 SINE B2 2 207 -9 7 770 204 40 0 0 chr17 24327781 24327806 -70944845 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 7 770 213 254 17 0 chr17 24327946 24328005 -70944646 - B3 SINE B2 -156 60 1 7 770 231 295 22 33 chr17 24328015 24328106 -70944545 - PB1D10 SINE Alu 0 117 28 7 770 756 167 72 7 chr17 24328148 24328287 -70944364 + B1_Mur2 SINE Alu 2 149 0 7 770 818 194 17 121 chr17 24328303 24328350 -70944301 - B3 SINE B2 -1 215 176 7 770 231 88 0 0 chr17 24328350 24328384 -70944267 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 7 770 1093 69 7 0 chr17 24328384 24328529 -70944122 - B1_Mus1 SINE Alu -2 146 1 7 770 818 194 17 121 chr17 24328529 24328720 -70943931 - B3 SINE B2 -41 175 2 7 770 255 304 38 0 chr17 24328779 24328858 -70943793 + ID4_ SINE ID 1 82 -1 7 770 492 212 28 13 chr17 24329456 24329581 -70943070 + B3 SINE B2 86 216 0 7 770 321 197 0 15 chr17 24329647 24329714 -70942937 + B3 SINE B2 5 70 -146 7 770 600 97 0 21 chr17 24329794 24329889 -70942762 + B1_Mus2 SINE Alu 55 147 0 7 770 233 109 22 0 chr17 24330174 24330220 -70942431 + (TTTTC)n Simple_repeat Simple_repeat 2 48 0 7 770 489 234 50 0 chr17 24330223 24330364 -70942287 - B1_Mur1 SINE Alu 0 149 2 7 770 381 306 50 64 chr17 24330376 24330596 -70942055 - ID_B1 SINE B4 -7 217 1 7 770 387 0 0 0 chr17 24331808 24331851 -70940800 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 770 188 35 35 0 chr17 24332102 24332131 -70940520 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 7 770 1427 207 30 44 chr17 24332487 24332826 -70939825 + ORR1D1 LTR MaLR 41 374 0 7 770 494 175 107 0 chr17 24335968 24336071 -70936580 - B1_Mur1 SINE Alu -16 133 20 8 770 1271 237 14 11 chr17 24338297 24338583 -70934068 + B4A SINE B4 6 292 0 8 770 478 209 9 26 chr17 24339037 24339150 -70933501 + PB1D10 SINE Alu 1 111 -6 8 770 284 282 12 37 chr17 24339163 24339244 -70933407 + ID4_ SINE ID 5 83 0 8 770 405 243 54 9 chr17 24340380 24340492 -70932159 - PB1D10 SINE Alu 0 117 1 8 770 21 36 0 0 chr17 24346278 24346306 -70926345 + GC_rich Low_complexity Low_complexity 1 28 0 8 770 223 340 9 36 chr17 24346866 24346976 -70925675 + MIRb SINE MIR 120 226 -42 8 770 371 237 54 0 chr17 24350330 24350423 -70922228 + PB1D7 SINE Alu 23 120 0 8 770 1224 49 0 0 chr17 24350481 24350625 -70922026 + B1_Mus2 SINE Alu 1 144 -3 8 770 192 200 0 0 chr17 24350627 24350667 -70921984 + A-rich Low_complexity Low_complexity 1 40 0 8 770 393 200 161 18 chr17 24350704 24350816 -70921835 + B1_Mur1 SINE Alu 22 149 0 8 770 353 263 131 0 chr17 24350815 24350914 -70921737 + B3A SINE B2 27 138 -60 8 770 458 304 0 0 chr17 24350963 24351078 -70921573 - PB1D9 SINE Alu -5 115 1 8 770 602 264 149 17 chr17 24351101 24351282 -70921369 + B3 SINE B2 1 205 -11 8 770 399 282 66 37 chr17 24351286 24351422 -70921229 - B3 SINE B2 -7 209 70 8 770 1200 55 7 0 chr17 24351850 24351995 -70920656 - B1_Mus1 SINE Alu 0 148 3 8 770 1392 82 16 16 chr17 24352005 24352190 -70920461 - B2_Mm2 SINE B2 -9 186 2 8 770 299 194 48 0 chr17 24352239 24352301 -70920350 - PB1D10 SINE Alu -32 85 21 8 770 477 115 146 0 chr17 24352335 24352431 -70920220 - B1_Mur3 SINE Alu 0 149 40 8 770 874 134 42 0 chr17 24353539 24353681 -70918970 + B1_Mur3 SINE Alu 1 148 -1 8 770 272 265 0 46 chr17 24353978 24354065 -70918586 + G-rich Low_complexity Low_complexity 6 88 0 8 770 213 213 0 0 chr17 24354211 24354258 -70918393 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 8 770 1151 63 28 0 chr17 24354285 24354427 -70918224 + B1_Mm SINE Alu 1 146 -1 8 770 549 246 106 22 chr17 24355544 24355723 -70916928 + B3A SINE B2 1 194 -4 8 770 1173 82 0 0 chr17 24355729 24355876 -70916775 + B1_Mus1 SINE Alu 2 148 0 8 770 252 0 0 0 chr17 24355888 24355916 -70916735 + (GA)n Simple_repeat Simple_repeat 2 29 0 8 770 318 50 0 0 chr17 24355918 24355958 -70916693 + (GGA)n Simple_repeat Simple_repeat 3 42 0 8 770 1198 34 0 20 chr17 24356230 24356379 -70916272 - B1_Mus2 SINE Alu 0 147 2 8 770 361 218 39 0 chr17 24358436 24358514 -70914137 - ID_B1 SINE B4 -21 203 123 8 770 1171 75 0 0 chr17 24358536 24358683 -70913968 - B1_Mus1 SINE Alu 0 148 2 8 770 668 251 65 6 chr17 24358708 24358876 -70913775 - B3 SINE B2 -38 178 1 8 770 506 306 93 2 chr17 24359283 24359455 -70913196 - B3 SINE B2 -9 189 13 8 770 308 221 44 0 chr17 24359503 24359571 -70913080 - MIRb SINE MIR -74 194 124 8 770 717 12 0 0 chr17 24361581 24361663 -70910988 + (CA)n Simple_repeat Simple_repeat 2 83 0 8 770 261 0 0 0 chr17 24363212 24363241 -70909410 + (CAA)n Simple_repeat Simple_repeat 2 30 0 8 770 369 269 67 39 chr17 24363948 24364126 -70908525 + L1MB8 LINE L1 5881 6063 -115 8 770 812 93 127 37 chr17 24364191 24364325 -70908326 - B1_Mus1 SINE Alu -1 147 2 8 770 441 0 0 0 chr17 24364412 24364461 -70908190 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 770 237 65 0 0 chr17 24364477 24364508 -70908143 + (TC)n Simple_repeat Simple_repeat 2 32 0 8 770 183 80 0 0 chr17 24364508 24364533 -70908118 + (CA)n Simple_repeat Simple_repeat 1 25 0 8 770 983 216 34 0 chr17 24365392 24365600 -70907051 - B3 SINE B2 0 216 2 8 770 292 191 151 9 chr17 24365693 24365799 -70906852 - Lx7 LINE L1 -22 7674 7554 8 770 231 88 0 0 chr17 24365834 24365868 -70906783 + (CA)n Simple_repeat Simple_repeat 2 35 0 8 770 598 223 57 57 chr17 24365868 24366077 -70906574 - Lx7 LINE L1 -281 7415 7207 8 770 1384 103 0 15 chr17 24366320 24366518 -70906133 + B2_Mm2 SINE B2 1 195 0 8 770 451 318 46 33 chr17 24366527 24366680 -70905971 + RSINE1 SINE B4 1 155 -10 8 770 218 202 32 53 chr17 24366684 24366753 -70905898 + (TAA)n Simple_repeat Simple_repeat 3 71 0 8 770 1603 37 0 5 chr17 24366753 24366943 -70905708 - B2_Mm1a SINE B2 -3 190 2 8 770 218 202 32 53 chr17 24366943 24366967 -70905684 + (TAA)n Simple_repeat Simple_repeat 3 25 0 8 770 214 321 78 35 chr17 24367126 24367242 -70905409 - B1F SINE Alu -6 143 23 8 770 493 282 78 32 chr17 24367465 24367619 -70905032 + RSINE1 SINE B4 3 163 -2 8 770 1118 111 63 48 chr17 24367681 24367870 -70904781 + B2_Mm2 SINE B2 1 192 -3 8 770 1105 95 7 0 chr17 24367959 24368106 -70904545 - B1_Mus1 SINE Alu 0 148 1 8 770 198 91 0 0 chr17 24368641 24368674 -70903977 + (C)n Simple_repeat Simple_repeat 1 33 0 8 770 423 292 57 53 chr17 24369058 24369322 -70903329 + RMER10B LTR ERVL 5 269 -129 8 770 910 195 21 11 chr17 24370392 24370579 -70902072 + MTC LTR MaLR 128 316 -105 8 770 674 273 6 13 chr17 24372432 24372588 -70900063 - RSINE1 SINE B4 -9 156 2 8 770 502 344 37 5 chr17 24372650 24372840 -70899811 - B4A SINE B4 -96 196 1 8 770 207 0 0 0 chr17 24372853 24372876 -70899775 + (A)n Simple_repeat Simple_repeat 1 23 0 8 770 291 279 37 37 chr17 24373423 24373505 -70899146 + PB1D7 SINE Alu 10 91 -29 8 770 270 282 114 35 chr17 24373508 24373622 -70899029 + B4A SINE B4 2 124 -168 8 770 903 222 35 10 chr17 24374345 24374545 -70898106 - B3 SINE B2 -11 205 1 8 770 693 197 52 7 chr17 24375019 24375172 -70897479 + B3 SINE B2 57 216 0 8 770 1590 121 105 26 chr17 24375461 24375774 -70896877 + MTC LTR MaLR 83 420 -1 8 770 325 226 243 10 chr17 24375776 24375879 -70896772 - RSINE1 SINE B4 -30 135 9 8 770 805 247 20 25 chr17 24376454 24376653 -70895998 + B3A SINE B2 1 198 0 8 770 231 114 0 0 chr17 24378556 24378591 -70894060 + (T)n Simple_repeat Simple_repeat 1 35 0 8 770 1142 95 0 12 chr17 24378638 24378809 -70893842 - B2_Mm2 SINE B2 -25 170 2 8 770 258 262 24 36 chr17 24378879 24378962 -70893689 - ID4 SINE ID -1 82 1 8 771 553 262 92 27 chr17 24380417 24380673 -70891978 + L1MB7 LINE L1 5828 6111 -63 8 771 455 170 105 18 chr17 24380677 24380791 -70891860 + B3 SINE B2 93 216 0 8 771 216 0 0 0 chr17 24380803 24380827 -70891824 + (CA)n Simple_repeat Simple_repeat 2 25 0 8 771 305 282 63 16 chr17 24381145 24381271 -70891380 + Charlie13b DNA Charlie 280 411 -101 8 771 886 158 0 0 chr17 24382428 24382561 -70890090 + B1_Mur4 SINE Alu 3 135 -15 8 771 810 102 0 0 chr17 24382564 24382682 -70889969 + (GGAA)n Simple_repeat Simple_repeat 3 120 0 8 771 1284 89 0 0 chr17 24382682 24382862 -70889789 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 8 771 794 86 9 0 chr17 24382862 24382978 -70889673 + (GGAA)n Simple_repeat Simple_repeat 1 117 0 8 771 1515 28 0 0 chr17 24382978 24383158 -70889493 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 8 771 846 255 204 64 chr17 24383227 24383667 -70888984 + RCHARR1 DNA MER1_type 37 538 -436 8 771 869 244 50 5 chr17 24383667 24383865 -70888786 + B3 SINE B2 1 207 -9 8 771 415 252 183 0 chr17 24383954 24384069 -70888582 - B1_Mur3 SINE Alu -13 136 1 8 771 1226 48 0 0 chr17 24384094 24384239 -70888412 + B1_Mus1 SINE Alu 4 148 0 8 771 888 94 195 0 chr17 24384280 24384429 -70888222 + B2_Mm2 SINE B2 4 181 -14 8 771 354 82 49 0 chr17 24384458 24384519 -70888132 + B2_Mm1a SINE B2 127 190 -3 8 771 1275 41 0 0 chr17 24384533 24384680 -70887971 - B1_Mus2 SINE Alu 0 147 1 8 771 28 0 0 0 chr17 24384717 24384745 -70887906 + AT_rich Low_complexity Low_complexity 1 28 0 8 771 1506 63 21 5 chr17 24384903 24385094 -70887557 + B2_Mm2 SINE B2 1 194 -1 8 771 831 206 18 0 chr17 24385100 24385270 -70887381 - B3 SINE B2 -41 175 3 8 771 216 163 47 0 chr17 24385422 24385465 -70887186 + PB1D10 SINE Alu 42 86 -31 8 771 295 262 25 0 chr17 24385428 24385508 -70887143 + ID_B1 SINE B4 129 210 -14 8 771 245 306 91 10 chr17 24385522 24385621 -70887030 + PB1D10 SINE Alu 1 107 -10 8 771 933 222 19 14 chr17 24385656 24385871 -70886780 + B3 SINE B2 1 216 0 8 771 763 178 262 17 chr17 24385939 24386111 -70886540 + B3 SINE B2 1 214 -2 8 771 884 43 8 0 chr17 24386499 24386616 -70886035 + B1_Mus2 SINE Alu 30 147 0 8 771 463 259 17 25 chr17 24386870 24386989 -70885662 - ID_B1 SINE B4 -26 198 81 8 771 1234 121 9 33 chr17 24387199 24387412 -70885239 - URR1A DNA MER1_type -13 213 6 8 771 1108 81 0 7 chr17 24389152 24389301 -70883350 - B1_Mus1 SINE Alu 0 148 1 8 771 982 239 188 41 chr17 24389632 24389977 -70882674 + MTD LTR MaLR 21 416 -3 8 771 242 315 44 11 chr17 24389977 24390049 -70882602 - B1F1 SINE Alu -63 86 12 8 771 2196 87 32 19 chr17 24390058 24390374 -70882277 + ORR1A2 LTR MaLR 8 327 0 8 771 1731 204 33 86 chr17 24390594 24391049 -70881602 - RLTR28B LTR ERVL -50 431 1 8 771 728 287 152 76 chr17 24391303 24391546 -70881105 - L1_Mur3 LINE L1 -3137 2710 2399 9 771 504 0 0 0 chr17 24391546 24391602 -70881049 + (TTTTG)n Simple_repeat Simple_repeat 1 56 0 9 771 728 287 152 76 chr17 24391602 24391962 -70880689 - L1_Mur3 LINE L1 -3417 2430 2023 9 771 569 196 333 6 chr17 24391962 24392121 -70880530 - B3 SINE B2 -5 211 1 9 771 662 287 152 76 chr17 24392121 24392380 -70880271 - L1_Mur3 LINE L1 -3825 2022 1782 9 771 249 108 0 0 chr17 24394762 24394799 -70877852 + (T)n Simple_repeat Simple_repeat 1 37 0 9 771 1091 82 0 13 chr17 24394801 24394950 -70877701 - B1_Mus1 SINE Alu 0 148 2 9 771 1418 74 21 0 chr17 24395178 24395368 -70877283 - B2_Mm2 SINE B2 0 195 2 9 771 1168 56 14 0 chr17 24395731 24395875 -70876776 + B1_Mm SINE Alu 2 147 0 9 771 243 0 0 0 chr17 24395875 24395902 -70876749 + (A)n Simple_repeat Simple_repeat 1 27 0 9 771 1362 241 60 41 chr17 24395913 24396280 -70876371 - MTD LTR MaLR -38 381 8 9 771 279 0 0 0 chr17 24396468 24396499 -70876152 + (CA)n Simple_repeat Simple_repeat 2 32 0 9 771 256 333 31 37 chr17 24396521 24396683 -70875968 - RSINE1 SINE B4 -2 163 3 9 771 233 253 46 46 chr17 24396997 24397084 -70875567 + RLTR25B LTR ERVK 428 514 -514 9 771 424 211 53 0 chr17 24397013 24397108 -70875543 + B1_Mm SINE Alu 43 142 -5 9 771 1543 187 12 126 chr17 24397856 24398012 -70874639 + ORR1D1 LTR MaLR 1 148 -226 9 771 1211 34 0 26 chr17 24398012 24398163 -70874488 + B1_Mus2 SINE Alu 1 147 0 9 771 1543 187 12 126 chr17 24398163 24398428 -70874223 + ORR1D1 LTR MaLR 149 374 0 9 771 961 145 21 0 chr17 24398520 24398665 -70873986 - B1_Mus1 SINE Alu 0 148 1 9 771 1043 278 62 88 chr17 24399173 24399560 -70873091 + MTE2a LTR MaLR 1 377 -2 9 771 888 287 80 27 chr17 24399585 24399886 -70872765 + MTE-int LTR MaLR 42 358 -1222 9 771 2172 119 34 3 chr17 24399820 24400148 -70872503 - ORR1A1 LTR MaLR -8 338 1 9 771 1528 21 5 56 chr17 24400165 24400362 -70872289 + B2_Mm1a SINE B2 2 188 -5 9 771 1292 14 0 7 chr17 24400372 24400520 -70872131 + B1_Mm SINE Alu 1 147 0 9 771 1204 61 0 0 chr17 24400542 24400689 -70871962 + B1_Mus1 SINE Alu 2 148 0 9 771 400 221 0 0 chr17 24400689 24400766 -70871885 + MTE-int LTR MaLR 287 363 -1217 9 771 372 189 0 0 chr17 24400769 24400843 -70871808 + T-rich Low_complexity Low_complexity 2 75 0 9 771 1553 53 16 0 chr17 24400862 24401051 -70871600 - B2_Mm2 SINE B2 -1 194 3 9 771 538 205 131 0 chr17 24401057 24401179 -70871472 + MTE2a LTR MaLR 238 375 -4 9 771 1631 47 0 0 chr17 24401505 24401698 -70870953 + B2_Mm1t SINE B2 1 193 0 9 771 225 327 59 59 chr17 24401900 24402069 -70870582 + MIR3 SINE MIR 36 204 -4 9 771 375 210 100 3 chr17 24403256 24403372 -70869279 - PB1D10 SINE Alu -12 136 7 9 771 262 322 149 0 chr17 24403294 24403381 -70869270 - ID_B1 SINE B4 -47 177 78 9 771 728 237 117 17 chr17 24403384 24403564 -70869087 - B3A SINE B2 0 198 1 9 771 217 291 89 0 chr17 24403580 24403659 -70868992 - MIR SINE MIR -23 245 160 9 771 405 102 0 0 chr17 24404932 24404991 -70867660 + (GGA)n Simple_repeat Simple_repeat 1 59 0 9 771 23 33 0 0 chr17 24405074 24405104 -70867547 + AT_rich Low_complexity Low_complexity 1 30 0 9 771 729 0 0 0 chr17 24405115 24405196 -70867455 + (TTC)n Simple_repeat Simple_repeat 2 82 0 9 771 1059 78 162 0 chr17 24405196 24405350 -70867301 - B2_Mm1a SINE B2 -13 180 2 9 771 1113 8 0 0 chr17 24405350 24405476 -70867175 + (TTC)n Simple_repeat Simple_repeat 2 127 0 9 771 356 299 113 65 chr17 24405939 24406186 -70866465 - Lx8 LINE L1 -2 7471 7213 9 771 1202 74 0 0 chr17 24406382 24406530 -70866121 + B1_Mus1 SINE Alu 1 148 0 9 771 324 0 0 0 chr17 24406974 24407010 -70865641 + (TTTTG)n Simple_repeat Simple_repeat 3 38 0 9 771 459 302 40 0 chr17 24407012 24407138 -70865513 - B1F SINE Alu -12 137 7 9 771 453 36 0 0 chr17 24407254 24407309 -70865342 + (GA)n Simple_repeat Simple_repeat 1 55 0 9 771 219 233 27 27 chr17 24407413 24407488 -70865163 + G-rich Low_complexity Low_complexity 3 77 0 9 771 922 244 24 0 chr17 24407702 24407907 -70864744 + B3 SINE B2 1 210 -6 9 771 1254 249 104 9 chr17 24407952 24408280 -70864371 - ORR1D2 LTR MaLR -11 359 1 9 771 1629 247 79 75 chr17 24408348 24408468 -70864183 + L1_Mur3 LINE L1 1533 1635 -4245 9 771 892 156 14 0 chr17 24408468 24408609 -70864042 + B1_Mur3 SINE Alu 5 147 -2 9 771 1629 247 79 75 chr17 24408609 24408967 -70863684 + L1_Mur3 LINE L1 1636 1979 -3901 9 771 1501 169 172 0 chr17 24408967 24409286 -70863365 + ORR1D1 LTR MaLR 1 374 0 9 771 1629 247 79 75 chr17 24409286 24409502 -70863149 + L1_Mur3 LINE L1 1980 2231 -3649 9 771 1216 54 0 0 chr17 24409507 24409654 -70862997 + B1_Mus2 SINE Alu 1 147 0 9 771 958 189 41 77 chr17 24409654 24409992 -70862659 + L1_Mur3 LINE L1 3047 3372 -2508 9 771 456 55 0 0 chr17 24409992 24410047 -70862604 - ORR1A2 LTR MaLR 0 326 272 9 771 213 65 0 0 chr17 24410064 24410095 -70862556 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 771 824 23 0 223 chr17 24410095 24410252 -70862399 - B1_Mus2 SINE Alu -10 137 17 9 771 2013 81 3 72 chr17 24410263 24410568 -70862083 - ORR1A2 LTR MaLR -43 284 1 9 771 288 212 106 0 chr17 24410574 24410659 -70861992 + L1_Mur3 LINE L1 3376 3469 -2411 9 771 213 293 58 58 chr17 24410676 24410763 -70861888 - B2_Mm1t SINE B2 -106 87 1 9 771 717 183 107 0 chr17 24410791 24410922 -70861729 + B1_Mur3 SINE Alu 3 147 -2 9 771 1152 65 0 0 chr17 24411027 24411166 -70861485 + B1_Mus1 SINE Alu 1 139 -9 9 771 221 0 0 33 chr17 24411166 24411196 -70861455 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 9 771 259 306 22 65 chr17 24411435 24411620 -70861031 - L1MEg LINE L1 -4771 1313 1137 9 771 679 144 0 25 chr17 24411632 24411753 -70860898 + ORR1B1 LTR MaLR 41 158 -236 9 771 826 87 15 5 chr17 24411767 24411901 -70860750 + ORR1B1 LTR MaLR 230 386 -8 9 771 10271 134 36 106 chr17 24411907 24413782 -70858869 + ORR1B1-int LTR MaLR 3 1772 -191 9 771 1350 81 16 21 chr17 24413782 24413971 -70858680 - B2_Mm1t SINE B2 -4 189 2 9 771 10271 134 36 106 chr17 24413971 24414147 -70858504 + ORR1B1-int LTR MaLR 1773 1914 -49 9 771 2560 142 42 16 chr17 24414147 24414596 -70858055 + RMER6B LTR ERVK 1 461 0 9 771 10271 134 36 106 chr17 24414596 24414651 -70858000 + ORR1B1-int LTR MaLR 1915 1963 0 9 771 1692 147 82 124 chr17 24414651 24415021 -70857630 + ORR1B1 LTR MaLR 42 394 0 9 771 318 204 210 20 chr17 24415297 24415397 -70857254 + PB1D9 SINE Alu 1 119 -1 9 771 192 200 0 0 chr17 24415710 24415750 -70856901 + GA-rich Low_complexity Low_complexity 2 41 0 9 771 256 292 114 81 chr17 24416856 24416869 -70855782 + PB1 SINE Alu 1 12 -115 9 771 2507 105 65 0 chr17 24416869 24417239 -70855412 + ORR1B1 LTR MaLR 1 394 0 9 771 353 284 50 43 chr17 24417239 24417348 -70855303 + PB1D10 SINE Alu 13 127 0 9 771 361 312 42 7 chr17 24418557 24418699 -70853952 + B1F SINE Alu 1 147 -2 9 771 1360 267 137 21 chr17 24418731 24418765 -70853886 + Lx7 LINE L1 6692 6724 -972 9 771 195 42 0 0 chr17 24418765 24418789 -70853862 + (TGGGGG)n Simple_repeat Simple_repeat 6 29 0 9 771 1360 267 137 21 chr17 24418789 24419279 -70853372 + Lx7 LINE L1 6725 7276 -420 9 771 201 139 0 0 chr17 24419313 24419356 -70853295 + (TTGG)n Simple_repeat Simple_repeat 2 44 0 9 771 1084 38 0 0 chr17 24419373 24419506 -70853145 + B1_Mus2 SINE Alu 15 147 0 9 771 216 135 0 0 chr17 24419506 24419543 -70853108 + (A)n Simple_repeat Simple_repeat 1 37 0 9 771 24 0 0 0 chr17 24419621 24419645 -70853006 + AT_rich Low_complexity Low_complexity 1 24 0 9 771 936 187 80 5 chr17 24419668 24419845 -70852806 + B3 SINE B2 11 201 -15 9 771 4862 191 46 12 chr17 24419845 24420821 -70851830 + RMER19B LTR ERVK 1 897 -5 9 771 28 48 0 0 chr17 24420885 24420927 -70851724 + AT_rich Low_complexity Low_complexity 1 42 0 9 771 266 254 31 31 chr17 24421125 24421190 -70851461 + ID4 SINE ID 14 78 -5 9 771 227 274 39 64 chr17 24421190 24421203 -70851448 + ID SINE ID 14 89 -135 9 771 301 137 11 83 chr17 24421386 24421458 -70851193 - B2_Mm2 SINE B2 -100 116 47 9 771 1330 91 11 0 chr17 24421524 24421700 -70850951 - B2_Mm1t SINE B2 -14 179 2 9 771 438 198 35 35 chr17 24421700 24421815 -70850836 + MER2 DNA MER2_type 121 235 -110 9 771 306 249 1 0 chr17 24421808 24421872 -70850779 + ID4 SINE ID 10 74 -78 9 771 450 0 0 0 chr17 24421872 24421922 -70850729 + (CA)n Simple_repeat Simple_repeat 1 50 0 9 771 248 313 30 0 chr17 24421922 24421960 -70850691 + BC1_Mm scRNA scRNA 75 114 -38 9 771 407 234 252 0 chr17 24422047 24422148 -70850503 + B1_Mur2 SINE Alu 10 138 -11 9 771 652 122 10 252 chr17 24422148 24422211 -70850440 + B1_Mur4 SINE Alu 1 58 -92 9 771 441 0 0 0 chr17 24422211 24422260 -70850391 + (TG)n Simple_repeat Simple_repeat 1 49 0 9 771 652 122 10 252 chr17 24422260 24422394 -70850257 + B1_Mur4 SINE Alu 59 150 0 9 771 295 231 123 0 chr17 24423077 24423142 -70849509 - ID4_ SINE ID -10 73 1 9 771 983 168 40 55 chr17 24423302 24423504 -70849147 + B3 SINE B2 3 201 -15 9 771 809 203 74 30 chr17 24423514 24423717 -70848934 - B3 SINE B2 -4 212 1 9 771 558 275 41 22 chr17 24423824 24424044 -70848607 + B3A SINE B2 1 216 0 9 771 261 83 0 0 chr17 24424054 24424090 -70848561 + (A)n Simple_repeat Simple_repeat 1 36 0 9 771 340 324 57 28 chr17 24424256 24424504 -70848147 - L1ME3 LINE L1 0 6162 5908 9 771 1115 43 49 14 chr17 24424997 24425139 -70847512 - B1_Mus2 SINE Alu 0 147 1 9 771 421 292 41 7 chr17 24425174 24425319 -70847332 - RSINE1 SINE B4 -2 163 14 9 771 997 54 39 0 chr17 24425347 24425477 -70847174 - B1_Mus2 SINE Alu -4 143 9 9 771 910 131 20 27 chr17 24427002 24427151 -70845500 - B1_Mur1 SINE Alu -1 148 1 9 771 1163 164 30 0 chr17 24429125 24429326 -70843325 + B3 SINE B2 4 210 -6 9 771 751 184 7 29 chr17 24429358 24429481 -70843170 + B1_Mur2 SINE Alu 13 136 -13 9 771 511 60 0 23 chr17 24429481 24429567 -70843084 + (CAAAC)n Simple_repeat Simple_repeat 1 84 0 9 771 751 184 7 29 chr17 24429567 24429583 -70843068 + B1_Mur2 SINE Alu 137 149 0 9 771 993 140 0 7 chr17 24430350 24430501 -70842150 + B1_Mur4 SINE Alu 1 150 0 9 771 213 121 0 0 chr17 24430529 24430562 -70842089 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 771 822 182 0 0 chr17 24430617 24430776 -70841875 + (TG)n Simple_repeat Simple_repeat 2 160 0 9 771 330 299 0 0 chr17 24430782 24430869 -70841782 - PB1D10 SINE Alu -5 112 26 9 771 1568 33 0 26 chr17 24430877 24431066 -70841585 - B2_Mm1t SINE B2 -8 185 2 9 771 1417 205 101 73 chr17 24431247 24431615 -70841036 + ORR1C1 LTR MaLR 1 378 0 1 771 521 219 19 19 chr17 24431667 24431774 -70840877 - PB1D10 SINE Alu -10 107 1 1 771 525 158 32 144 chr17 24431778 24431950 -70840701 - B1_Mur4 SINE Alu 0 150 2 1 771 713 197 45 0 chr17 24432582 24432714 -70839937 + B1_Mur2 SINE Alu 2 139 -10 1 771 261 359 28 0 chr17 24432802 24432908 -70839743 + L3 LINE CR1 4373 4481 -8 1 771 518 114 0 11 chr17 24432912 24433001 -70839650 + (TG)n Simple_repeat Simple_repeat 1 88 0 1 771 436 288 36 43 chr17 24433014 24433152 -70839499 - B4A SINE B4 -22 270 134 1 771 1197 55 0 47 chr17 24433336 24433507 -70839144 - B2_Mm2 SINE B2 -4 191 29 1 771 461 317 40 127 chr17 24433697 24433758 -70838893 + MLT1G1 LTR MaLR 166 225 -354 1 771 3375 48 0 2 chr17 24433758 24434159 -70838492 - MTB LTR MaLR 0 400 1 1 771 461 302 68 152 chr17 24434159 24434424 -70838227 + MLT1G1 LTR MaLR 180 416 -163 1 771 264 314 71 40 chr17 24434924 24435050 -70837601 + MLT1G1-int LTR MaLR 828 957 -452 1 771 1266 76 47 0 chr17 24435059 24435231 -70837420 + B2_Mm2 SINE B2 1 180 -15 1 771 219 139 0 0 chr17 24435231 24435267 -70837384 + (TTC)n Simple_repeat Simple_repeat 2 37 0 1 771 1261 34 0 7 chr17 24435267 24435415 -70837236 - B1_Mus1 SINE Alu 0 148 2 1 771 319 114 0 0 chr17 24435450 24435494 -70837157 + B2_Mm2 SINE B2 121 164 -31 1 771 656 305 155 46 chr17 24435460 24435872 -70836779 + MLT1G1-int LTR MaLR 947 1403 -6 1 771 504 0 0 0 chr17 24436454 24436510 -70836141 + (GA)n Simple_repeat Simple_repeat 1 56 0 1 771 414 0 0 0 chr17 24436561 24436607 -70836044 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 771 778 179 20 20 chr17 24437724 24437872 -70834779 - B1_Mur4 SINE Alu -1 149 2 1 771 424 262 0 0 chr17 24438331 24438411 -70834240 - ID SINE ID -143 81 2 1 771 961 264 103 36 chr17 24438417 24438884 -70833767 + L1M4 LINE L1 4325 4822 -1324 1 771 665 201 64 7 chr17 24438925 24439065 -70833586 - B1F2 SINE Alu -1 148 1 1 771 898 234 35 0 chr17 24439106 24439307 -70833344 - B3 SINE B2 -8 208 1 1 771 994 85 0 28 chr17 24439322 24439504 -70833147 + (TG)n Simple_repeat Simple_repeat 1 177 0 1 771 1220 41 0 13 chr17 24439610 24439759 -70832892 + B1_Mus1 SINE Alu 2 148 0 1 771 346 279 30 24 chr17 24439790 24439959 -70832692 + L1M4 LINE L1 5211 5380 -766 1 771 434 189 77 1 chr17 24440948 24441040 -70831611 + B1_Mur4 SINE Alu 1 100 -20 1 771 864 114 0 0 chr17 24441041 24441172 -70831479 + (GGAA)n Simple_repeat Simple_repeat 3 133 0 1 771 4376 19 12 0 chr17 24441360 24441847 -70830804 + MT2_Mm LTR ERVL 1 493 0 1 771 365 308 47 19 chr17 24441867 24442099 -70830552 + L1M2 LINE L1 2138 2363 -4219 1 771 416 304 33 115 chr17 24442381 24442417 -70830234 + B4 SINE B4 56 76 -216 1 771 784 186 7 20 chr17 24442417 24442565 -70830086 + B1_Mur1 SINE Alu 3 148 -1 1 771 1455 59 38 0 chr17 24442631 24442817 -70829834 + B2_Mm2 SINE B2 1 193 -2 1 771 1223 84 66 0 chr17 24442835 24443002 -70829649 + B2_Mm1t SINE B2 2 179 -14 1 771 301 151 375 79 chr17 24443002 24443151 -70829500 + B2_Mm2 SINE B2 2 194 -1 1 771 859 317 214 42 chr17 24443199 24443589 -70829062 + MER21B LTR ERV1 19 458 -405 1 771 645 14 0 0 chr17 24443589 24443663 -70828988 + (TCTA)n Simple_repeat Simple_repeat 2 75 0 1 771 859 317 214 42 chr17 24443663 24443898 -70828753 + MER21B LTR ERV1 459 752 -111 1 771 1003 40 79 0 chr17 24443983 24444109 -70828542 + B1_Mus2 SINE Alu 3 138 -9 1 771 228 67 0 0 chr17 24444109 24444139 -70828512 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1 771 463 204 164 18 chr17 24444612 24444722 -70827929 + B3 SINE B2 91 216 0 1 771 919 139 7 0 chr17 24444732 24444876 -70827775 + B1_Mur4 SINE Alu 6 150 0 1 771 330 26 0 0 chr17 24444883 24444922 -70827729 + (CCA)n Simple_repeat Simple_repeat 1 39 0 1 771 271 285 27 116 chr17 24445011 24445034 -70827617 - BC1_Mm scRNA scRNA -18 134 115 1 771 1204 68 0 0 chr17 24445034 24445180 -70827471 - B1_Mus2 SINE Alu 0 147 2 1 771 301 285 27 116 chr17 24445180 24445303 -70827348 - ID4 SINE ID -38 114 1 1 771 233 326 29 39 chr17 24445386 24445488 -70827163 - B1_Mur2 SINE Alu -2 147 47 1 771 228 67 0 0 chr17 24445728 24445758 -70826893 + (TGG)n Simple_repeat Simple_repeat 1 30 0 1 771 540 302 0 26 chr17 24445835 24445988 -70826663 - RSINE1 SINE B4 -14 151 3 1 771 257 320 53 0 chr17 24446229 24446304 -70826347 + B3A SINE B2 69 147 -51 1 771 673 270 38 61 chr17 24446318 24446531 -70826120 - B4 SINE B4 -10 282 75 1 771 1189 48 7 0 chr17 24446643 24446789 -70825862 + B1_Mus2 SINE Alu 1 147 0 1 771 218 95 0 23 chr17 24446806 24446849 -70825802 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 771 214 265 0 0 chr17 24446946 24446995 -70825656 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 771 508 265 91 32 chr17 24447169 24447356 -70825295 + B3A SINE B2 1 198 0 1 771 803 229 214 12 chr17 24447382 24447625 -70825026 + B4 SINE B4 1 292 0 1 771 458 225 0 124 chr17 24447669 24447806 -70824845 + MT2B LTR ERVL 145 264 -337 1 771 1010 54 15 0 chr17 24447701 24447831 -70824820 + B1_Mus1 SINE Alu 9 140 -8 1 771 194 0 0 37 chr17 24447832 24447859 -70824792 + (CAAAA)n Simple_repeat Simple_repeat 4 29 0 1 771 270 0 0 0 chr17 24447986 24448016 -70824635 + (TC)n Simple_repeat Simple_repeat 1 30 0 1 771 252 0 0 0 chr17 24448016 24448043 -70824608 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 771 219 293 347 0 chr17 24448051 24448126 -70824525 + B1F1 SINE Alu 1 101 -48 1 771 245 140 23 23 chr17 24448095 24448139 -70824512 + PB1D7 SINE Alu 71 114 -6 1 771 1786 99 93 26 chr17 24448597 24448907 -70823744 + Lx LINE L1 6324 6654 0 1 771 1229 34 0 27 chr17 24449801 24449940 -70822711 + B1_Mus1 SINE Alu 1 139 -9 1 771 648 0 0 0 chr17 24449940 24450012 -70822639 + (CAAAC)n Simple_repeat Simple_repeat 2 73 0 1 771 632 259 51 6 chr17 24450352 24450527 -70822124 + B3A SINE B2 1 183 -15 1 771 1708 112 75 14 chr17 24450966 24451247 -70821404 + ORR1B1 LTR MaLR 97 394 0 1 771 429 198 104 47 chr17 24451247 24451350 -70821301 + B2_Mm2 SINE B2 82 190 -5 1 771 1046 120 56 28 chr17 24452150 24452330 -70820321 - B2_Mm2 SINE B2 -9 186 2 1 771 755 199 14 7 chr17 24452358 24452505 -70820146 - B1_Mur2 SINE Alu 0 149 2 1 771 2040 103 197 0 chr17 24452928 24453278 -70819373 + Lx3B LINE L1 6555 6973 0 1 771 213 65 0 0 chr17 24453328 24453359 -70819292 + (CAAAAA)n Simple_repeat Simple_repeat 4 34 0 1 771 2656 193 61 37 chr17 24453391 24453982 -70818669 + RLTR1D LTR ERV1 1 605 0 1 771 499 316 68 64 chr17 24455303 24455584 -70817067 - MT2A LTR ERVL -157 376 95 1 771 301 296 0 0 chr17 24455681 24455752 -70816899 - ID4_ SINE ID -10 73 3 1 771 461 210 0 10 chr17 24455772 24455873 -70816778 - PB1D10 SINE Alu -13 104 5 1 771 416 222 188 62 chr17 24455938 24456082 -70816569 - RSINE1 SINE B4 -1 164 3 1 771 402 212 234 6 chr17 24456144 24456203 -70816448 - RMER17C LTR ERVK -135 275 187 1 771 788 18 18 18 chr17 24456203 24456315 -70816336 + (GAGAA)n Simple_repeat Simple_repeat 5 116 0 1 771 402 212 234 6 chr17 24456315 24456426 -70816225 - RMER17C LTR ERVK -224 186 67 1 771 473 198 0 0 chr17 24456438 24456519 -70816132 + B3 SINE B2 1 81 -135 1 771 311 326 62 67 chr17 24456521 24456715 -70815936 - L1M4 LINE L1 -769 5377 5185 1 771 226 235 78 39 chr17 24456849 24456951 -70815700 + ORR1E LTR MaLR 39 144 -215 1 771 481 284 17 33 chr17 24457393 24457513 -70815138 - PB1 SINE Alu -7 120 3 1 771 620 152 182 8 chr17 24457595 24457721 -70814930 - B1_Mus1 SINE Alu 0 148 1 1 771 207 0 0 0 chr17 24457774 24457797 -70814854 + (TAATG)n Simple_repeat Simple_repeat 3 25 0 1 771 1103 68 0 33 chr17 24458283 24458434 -70814217 + B1_Mus2 SINE Alu 2 147 0 1 771 243 0 0 0 chr17 24458434 24458461 -70814190 + (A)n Simple_repeat Simple_repeat 1 27 0 1 771 481 18 0 0 chr17 24458461 24458516 -70814135 + ORR1A3 LTR MaLR 272 326 0 1 771 220 311 27 0 chr17 24458581 24458655 -70813996 + CT-rich Low_complexity Low_complexity 3 78 0 1 771 243 196 43 0 chr17 24458599 24458645 -70814006 + polypyrimidine Low_complexity Low_complexity 2 49 0 1 771 306 232 121 12 chr17 24458792 24458875 -70813776 - PB1D10 SINE Alu -2 115 24 1 771 336 228 46 14 chr17 24458879 24458993 -70813658 - L1M4 LINE L1 -2320 3826 3705 1 771 897 213 15 62 chr17 24459028 24459223 -70813428 - B3 SINE B2 0 216 31 1 771 2023 230 65 81 chr17 24459225 24459301 -70813350 + Lx9 LINE L1 5141 5215 -632 1 771 332 43 22 0 chr17 24459301 24459347 -70813304 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 771 2023 230 65 81 chr17 24459347 24459885 -70812766 + Lx9 LINE L1 5216 5771 -76 1 771 1230 54 0 0 chr17 24459885 24460032 -70812619 + B1_Mus2 SINE Alu 1 147 0 1 771 2023 230 65 81 chr17 24460032 24460051 -70812600 + Lx9 LINE L1 5772 5777 -70 1 771 701 199 179 16 chr17 24460051 24460235 -70812416 - B3 SINE B2 -1 215 2 1 771 3941 233 64 58 chr17 24460235 24461576 -70811075 + Lx9 LINE L1 5778 7274 -370 1 771 965 135 14 0 chr17 24461644 24461785 -70810866 - B1_Mur3 SINE Alu -5 144 2 1 771 320 283 40 20 chr17 24461790 24461938 -70810713 - L1M4 LINE L1 -950 5196 5046 1 771 457 294 275 0 chr17 24462131 24462349 -70810302 - B4A SINE B4 -8 284 7 1 771 355 283 69 0 chr17 24462349 24462494 -70810157 - L1M4 LINE L1 -1094 5052 4898 1 771 240 310 0 53 chr17 24463625 24463700 -70808951 - tRNA-Ala-GCY_ tRNA tRNA -4 71 1 1 771 252 329 0 0 chr17 24463633 24463703 -70808948 - ID4_ SINE ID -10 73 4 1 771 1125 63 7 0 chr17 24463971 24464106 -70808545 + B1_Mus1 SINE Alu 5 140 -8 1 771 269 26 26 0 chr17 24464106 24464144 -70808507 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 771 614 271 22 0 chr17 24464274 24464422 -70808229 + B1F2 SINE Alu 6 148 -1 1 771 265 305 66 33 chr17 24464914 24465036 -70807615 + B1F SINE Alu 24 149 0 1 771 225 0 0 0 chr17 24467249 24467274 -70805377 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 771 1137 78 0 0 chr17 24467277 24467418 -70805233 - B1_Mus1 SINE Alu -6 142 2 1 771 992 251 41 4 chr17 24467941 24468209 -70804442 - B4 SINE B4 -14 278 1 1 771 1748 100 70 4 chr17 24468599 24468868 -70803783 + RLTR33 LTR ERVK 1 287 -391 1 771 2565 60 3 0 chr17 24468868 24469186 -70803465 + ORR1A2 LTR MaLR 1 319 -8 1 771 2064 181 36 5 chr17 24469190 24469249 -70803402 + RLTR33 LTR ERVK 283 341 -337 1 771 1211 35 0 7 chr17 24469249 24469394 -70803257 + B1_Mus2 SINE Alu 1 144 -3 1 771 2064 181 36 5 chr17 24469394 24469718 -70802933 + RLTR33 LTR ERVK 342 677 -1 1 771 383 198 87 78 chr17 24469801 24469916 -70802735 + ID_B1 SINE B4 94 209 -15 1 771 271 167 0 29 chr17 24469922 24469990 -70802661 + GA-rich Low_complexity Low_complexity 2 67 0 1 771 256 329 0 0 chr17 24470067 24470143 -70802508 + ID4 SINE ID 2 77 -6 1 771 245 250 88 0 chr17 24470572 24470640 -70802011 - ID4_ SINE ID -8 75 2 1 771 376 289 78 43 chr17 24471440 24471581 -70801070 + MIR SINE MIR 30 175 -87 1 771 1170 42 0 34 chr17 24471713 24471861 -70800790 + B1_Mus2 SINE Alu 5 147 0 1 771 216 143 20 20 chr17 24471861 24471911 -70800740 + A-rich Low_complexity Low_complexity 1 50 0 1 771 346 275 85 41 chr17 24472048 24472227 -70800424 - MIR SINE MIR -40 222 34 1 771 785 170 0 7 chr17 24472794 24472930 -70799721 + B1_Mus1 SINE Alu 1 135 -13 1 771 4928 164 47 32 chr17 24473042 24473919 -70798732 + RMER19B LTR ERVK 1 890 -12 1 771 1021 110 14 0 chr17 24473961 24474106 -70798545 - B1_Mus1 SINE Alu -1 147 1 1 771 459 269 14 84 chr17 24474156 24474201 -70798450 - RSINE1 SINE B4 -31 134 96 1 771 2161 114 111 6 chr17 24474201 24474554 -70798097 + ORR1B1 LTR MaLR 5 394 0 1 771 459 269 14 84 chr17 24474554 24474650 -70798001 - RSINE1 SINE B4 -70 95 3 1 771 1425 169 79 7 chr17 24474786 24475066 -70797585 - RMER1B Other Other -9 1057 758 1 771 924 222 64 0 chr17 24475075 24475278 -70797373 + B3 SINE B2 1 216 0 1 771 240 86 0 0 chr17 24475414 24475449 -70797202 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 771 558 138 202 44 chr17 24475449 24475563 -70797088 - B1_Mus1 SINE Alu -8 140 9 1 771 504 0 0 0 chr17 24475606 24475662 -70796989 + (TTATA)n Simple_repeat Simple_repeat 5 60 0 1 771 4229 147 62 11 chr17 24476054 24476761 -70795890 + Lx7 LINE L1 542 1269 -6459 1 771 1230 75 16 65 chr17 24476761 24476946 -70795705 + B2_Mm2 SINE B2 1 176 -19 1 771 4229 149 100 7 chr17 24476946 24477029 -70795622 + Lx7 LINE L1 1270 1378 -4502 1 771 3777 157 131 41 chr17 24477097 24477807 -70794844 + RMER1A Other Other 127 878 -152 1 771 495 0 0 0 chr17 24477807 24477862 -70794789 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 771 3777 157 131 41 chr17 24477862 24477976 -70794675 + RMER1A Other Other 879 1024 -6 1 771 1155 101 6 0 chr17 24477977 24478136 -70794515 + B2_Mm1a SINE B2 1 160 -33 1 771 207 0 0 0 chr17 24478136 24478159 -70794492 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 1 771 7297 187 37 109 chr17 24478172 24480484 -70792167 + Lx7 LINE L1 5260 7360 -336 1 771 1142 76 14 0 chr17 24480512 24480657 -70791994 - B1_Mus2 SINE Alu 0 147 1 1 771 1590 139 8 127 chr17 24480717 24481103 -70791548 + Lx7 LINE L1 7357 7696 0 1 771 1232 48 0 0 chr17 24481176 24481321 -70791330 + B1_Mus1 SINE Alu 1 145 -3 1 771 437 0 19 0 chr17 24481326 24481379 -70791272 + (TAAAA)n Simple_repeat Simple_repeat 2 55 0 1 771 392 279 81 18 chr17 24481502 24481628 -70791023 - L2b LINE L2 -8 3418 3250 1 771 2385 154 37 12 chr17 24482025 24482432 -70790219 + MTC LTR MaLR 1 417 -4 1 771 475 64 231 0 chr17 24482684 24482762 -70789889 + B1_Mus2 SINE Alu 42 137 -10 1 771 603 0 0 0 chr17 24482763 24482830 -70789821 + (CAAAA)n Simple_repeat Simple_repeat 3 69 0 1 771 391 198 39 101 chr17 24482858 24482987 -70789664 + RSINE1 SINE B4 39 159 -6 1 771 488 229 0 0 chr17 24483507 24483603 -70789048 + ID_B1 SINE B4 127 222 -2 1 771 506 241 295 7 chr17 24483792 24484074 -70788577 + MTE2b LTR MaLR 16 378 -1 1 771 967 144 20 0 chr17 24484280 24484426 -70788225 + B1_Mur2 SINE Alu 1 149 0 1 771 324 354 160 39 chr17 24484436 24484951 -70787700 + L2 LINE L2 2087 2678 -741 1 771 1214 97 15 70 chr17 24484951 24485151 -70787500 - B2_Mm1t SINE B2 -4 189 1 1 771 324 354 160 39 chr17 24485151 24485328 -70787323 + L2 LINE L2 2679 2863 -556 1 771 688 274 101 19 chr17 24485391 24485599 -70787052 + B4A SINE B4 3 227 -65 1 771 665 316 6 0 chr17 24485603 24485780 -70786871 + B3A SINE B2 2 179 -19 1 771 504 0 0 0 chr17 24485782 24485838 -70786813 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 771 22 35 0 0 chr17 24485879 24485908 -70786743 + AT_rich Low_complexity Low_complexity 1 29 0 1 771 225 0 0 0 chr17 24485957 24485982 -70786669 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 771 917 93 79 0 chr17 24485996 24486135 -70786516 + B1_Mur4 SINE Alu 1 150 0 1 771 336 260 67 30 chr17 24486402 24486537 -70786114 + RLTR15 LTR ERVK 1 140 -219 1 771 259 328 129 2 chr17 24487594 24487719 -70784932 - MIRc SINE MIR -36 172 35 1 771 391 319 28 7 chr17 24490686 24490831 -70781820 + RSINE1 SINE B4 1 148 -17 1 771 513 88 0 0 chr17 24491838 24491918 -70780733 + (TG)n Simple_repeat Simple_repeat 2 81 0 1 771 432 233 12 78 chr17 24491963 24492099 -70780552 + MT2B LTR ERVL 125 260 -324 1 771 1027 94 0 0 chr17 24492003 24492141 -70780510 + B1_Mus2 SINE Alu 10 147 0 1 771 1977 224 19 36 chr17 24492539 24492951 -70779700 - Lx5 LINE L1 -7 7043 6639 1 771 242 330 151 16 chr17 24492960 24493271 -70779380 - ORR1D1 LTR MaLR -3 371 19 1 771 364 124 28 19 chr17 24493444 24493551 -70779100 + (TG)n Simple_repeat Simple_repeat 1 108 0 1 771 229 140 58 32 chr17 24493607 24493762 -70778889 + (TG)n Simple_repeat Simple_repeat 1 159 0 1 771 809 246 81 15 chr17 24493762 24494034 -70778617 - B4A SINE B4 0 292 3 1 771 766 270 59 0 chr17 24494061 24494265 -70778386 - B3 SINE B2 0 216 1 1 771 392 308 75 20 chr17 24494505 24494651 -70778000 - RSINE1 SINE B4 -11 154 1 1 771 473 264 30 44 chr17 24495194 24495329 -70777322 + B1_Mur2 SINE Alu 2 134 -15 1 771 1822 137 10 23 chr17 24495580 24495879 -70776772 + ORR1B2 LTR MaLR 69 363 -4 1 771 239 241 0 0 chr17 24496510 24496564 -70776087 + ID4_ SINE ID 13 66 -17 1 771 286 234 15 30 chr17 24497652 24497718 -70774933 - tRNA-Ala-GCY_ tRNA tRNA -10 65 1 1 771 681 252 98 10 chr17 24498198 24498402 -70774249 - ID_B1 SINE B4 -2 222 1 1 771 538 185 74 0 chr17 24498579 24498687 -70773964 + RSINE1 SINE B4 14 129 -36 1 771 568 214 0 64 chr17 24498894 24499019 -70773632 - PB1D9 SINE Alu -2 118 2 1 771 2739 34 6 0 chr17 24499054 24499382 -70773269 - L1Md_F3 LINE L1 0 6584 6255 1 771 951 28 0 0 chr17 24499382 24499489 -70773162 - U6 snRNA snRNA 0 107 1 1 771 372 262 0 0 chr17 24499505 24499589 -70773062 - B1_Mur4 SINE Alu -66 84 1 1 771 570 265 38 0 chr17 24500170 24500302 -70772349 + B1F1 SINE Alu 2 138 -11 1 771 406 382 69 0 chr17 24500576 24500707 -70771944 - RSINE1 SINE B4 -1 164 25 2 771 1141 75 7 0 chr17 24500764 24500910 -70771741 + B1_Mus1 SINE Alu 2 148 0 3 771 536 258 0 89 chr17 24501060 24501239 -70771412 + RSINE1 SINE B4 3 165 0 4 771 886 160 0 8 chr17 24502495 24502627 -70770024 + B1_Mur1 SINE Alu 7 137 -12 5 771 252 287 112 62 chr17 24502627 24502648 -70770003 - YREP_Mm Unknown Unknown -1494 283 151 6 771 251 272 98 94 chr17 24503478 24503609 -70769042 + MT2B2 LTR ERVL 25 227 -356 7 771 418 211 0 0 chr17 24503609 24503680 -70768971 + PB1D9 SINE Alu 2 72 -48 8 771 639 235 83 0 chr17 24504115 24504247 -70768404 + B1_Mur2 SINE Alu 1 143 -6 9 771 803 230 40 20 chr17 24504255 24504455 -70768196 + B3 SINE B2 1 204 -12 1 771 406 242 251 41 chr17 24504747 24504918 -70767733 + B3 SINE B2 2 208 -8 1 771 268 157 16 75 chr17 24504961 24505043 -70767608 + B1_Mus2 SINE Alu 44 146 -1 8 771 274 77 57 19 chr17 24505058 24505111 -70767540 + A-rich Low_complexity Low_complexity 2 56 0 1 771 3183 49 0 0 chr17 24505241 24505628 -70767023 - MTB LTR MaLR 0 400 14 1 771 7511 80 7 79 chr17 24505628 24506812 -70765839 - MTB-int LTR MaLR 0 1098 1 1 771 2944 54 75 0 chr17 24506812 24507184 -70765467 - MTB LTR MaLR 0 400 1 1 771 1360 105 115 0 chr17 24507187 24507387 -70765264 - URR1A DNA MER1_type -3 223 1 1 771 324 271 142 107 chr17 24508171 24508202 -70764449 + B4 SINE B4 69 161 -131 1 771 775 88 18 0 chr17 24508202 24508315 -70764336 + B1_Mur3 SINE Alu 34 148 -1 1 771 324 271 142 107 chr17 24508315 24508340 -70764311 + B4 SINE B4 162 243 -49 1 771 361 287 74 31 chr17 24508359 24508521 -70764130 + MLT1D LTR MaLR 240 408 -97 1 771 4233 98 95 0 chr17 24508694 24509306 -70763345 - RLTR33 LTR ERVK -2 676 7 1 771 280 162 24 48 chr17 24509583 24509667 -70762984 + (TG)n Simple_repeat Simple_repeat 1 82 0 1 96 4446 199 44 35 chr17 24509667 24510554 -70762097 + RMER19B LTR ERVK 1 895 -7 2 772 194 147 14 42 chr17 24510561 24510632 -70762019 + (TG)n Simple_repeat Simple_repeat 1 69 0 2 772 612 241 126 45 chr17 24510632 24510901 -70761750 - B4A SINE B4 0 292 2 2 772 268 256 32 8 chr17 24511687 24511733 -70760918 + T-rich Low_complexity Low_complexity 83 130 0 2 772 938 162 0 0 chr17 24511733 24511881 -70760770 - B1_Mus1 SINE Alu 0 148 1 2 772 268 256 32 8 chr17 24511881 24511960 -70760691 + T-rich Low_complexity Low_complexity 3 82 0 2 772 258 56 0 0 chr17 24512519 24512555 -70760096 + (T)n Simple_repeat Simple_repeat 1 36 0 2 772 876 98 28 7 chr17 24512555 24512699 -70759952 - B1_Mm SINE Alu 0 147 1 2 772 22 0 0 0 chr17 24514366 24514388 -70758263 + AT_rich Low_complexity Low_complexity 1 22 0 2 772 746 214 45 65 chr17 24515189 24515389 -70757262 - B3A SINE B2 -2 196 1 2 772 21 36 0 0 chr17 24515408 24515436 -70757215 + AT_rich Low_complexity Low_complexity 1 28 0 3 772 228 299 33 142 chr17 24515436 24515619 -70757032 - RSINE1 SINE B4 0 165 3 3 772 1295 67 22 27 chr17 24516186 24516370 -70756281 - B2_Mm2 SINE B2 -10 185 3 3 772 560 222 185 0 chr17 24516481 24516616 -70756035 - MLT1A1 LTR MaLR -8 400 241 3 772 481 211 96 9 chr17 24516782 24516897 -70755754 + B1F SINE Alu 25 149 0 3 772 378 238 60 0 chr17 24517035 24517067 -70755584 + ID_B1 SINE B4 65 100 -124 3 772 477 0 0 0 chr17 24517067 24517120 -70755531 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 772 378 238 60 0 chr17 24517120 24517171 -70755480 + ID_B1 SINE B4 101 152 -72 3 772 732 271 25 20 chr17 24517280 24517476 -70755175 + B3A SINE B2 2 198 0 3 772 370 153 23 23 chr17 24517797 24517884 -70754767 + (TATG)n Simple_repeat Simple_repeat 3 89 0 3 772 1530 52 0 20 chr17 24517943 24518140 -70754511 + B2_Mm2 SINE B2 1 193 -2 3 772 252 111 0 0 chr17 24518149 24518194 -70754457 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 4 772 905 239 11 0 chr17 24518194 24518374 -70754277 - B3 SINE B2 -34 182 1 4 772 610 279 35 52 chr17 24518494 24518668 -70753983 + ID_B1 SINE B4 53 223 -1 4 772 367 247 0 49 chr17 24519313 24519394 -70753257 - ID4_ SINE ID -2 81 5 4 772 196 85 0 60 chr17 24519504 24519554 -70753097 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 4 772 667 269 240 10 chr17 24519590 24519890 -70752761 - MTEb LTR MaLR -10 369 1 4 772 1198 68 0 0 chr17 24519965 24520111 -70752540 + B1_Mus2 SINE Alu 1 146 -1 4 772 241 306 14 0 chr17 24521794 24521866 -70750785 + ID4_ SINE ID 2 74 -9 4 772 2326 237 73 88 chr17 24524644 24525015 -70747636 - RMER17B LTR ERVK -4 954 588 4 772 3315 53 0 2 chr17 24525015 24525412 -70747239 - MTA_Mm LTR MaLR 0 396 1 4 772 2326 227 206 119 chr17 24525412 24526035 -70746616 - RMER17B LTR ERVK -226 680 1 4 772 756 197 31 0 chr17 24526201 24526328 -70746323 + ID_B1 SINE B4 84 214 -10 5 772 628 199 69 62 chr17 24526328 24526345 -70746306 + B1F SINE Alu 3 147 -2 5 772 318 326 88 54 chr17 24526345 24526394 -70746257 - YREP_Mm Unknown Unknown -1488 292 114 5 772 354 101 43 0 chr17 24526481 24526550 -70746101 + (TCC)n Simple_repeat Simple_repeat 2 73 0 5 772 4346 179 154 25 chr17 24526560 24526633 -70746018 - MTC-int LTR MaLR -98 1160 1087 5 772 962 103 20 20 chr17 24526633 24526781 -70745870 + B1_Mus1 SINE Alu 1 148 0 5 772 4346 179 154 25 chr17 24526781 24527735 -70744916 - MTC-int LTR MaLR -172 1086 3 5 772 1981 126 162 3 chr17 24527739 24528090 -70744561 - MTC LTR MaLR -14 407 1 5 772 340 248 53 0 chr17 24528208 24528362 -70744289 - B3 SINE B2 0 216 2 5 772 858 143 30 0 chr17 24528609 24528742 -70743909 - B1_Mur2 SINE Alu -11 138 2 5 772 333 0 0 0 chr17 24528801 24528838 -70743813 + (TTAG)n Simple_repeat Simple_repeat 3 39 0 5 772 970 137 0 7 chr17 24528838 24528978 -70743673 - B1_Mus2 SINE Alu -8 139 1 5 772 251 159 0 0 chr17 24529398 24529442 -70743209 + L1MC2 LINE L1 6277 6320 -24 6 772 192 152 0 0 chr17 24529529 24529562 -70743089 + CT-rich Low_complexity Low_complexity 3 35 0 6 772 771 146 16 8 chr17 24529562 24529686 -70742965 - B1_Mm SINE Alu -21 126 2 6 772 226 186 23 23 chr17 24529657 24529701 -70742950 - MT2B2 LTR ERVL -297 287 244 6 772 268 0 95 0 chr17 24530487 24530529 -70742122 + (GGGA)n Simple_repeat Simple_repeat 3 48 0 6 772 221 270 189 0 chr17 24530984 24531058 -70741593 + RSINE1 SINE B4 43 130 -35 6 772 357 24 0 0 chr17 24531070 24531112 -70741539 + (TC)n Simple_repeat Simple_repeat 1 42 0 6 772 294 29 0 0 chr17 24531112 24531146 -70741505 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 772 25 0 0 0 chr17 24531153 24531178 -70741473 + AT_rich Low_complexity Low_complexity 1 25 0 6 772 1218 68 0 0 chr17 24531178 24531325 -70741326 - B1_Mus2 SINE Alu 0 147 1 6 772 759 217 35 0 chr17 24531344 24531487 -70741164 + B1_Mur1 SINE Alu 2 149 0 7 772 214 156 0 0 chr17 24531687 24531719 -70740932 - ID2 SINE ID -3 80 49 7 772 617 269 113 99 chr17 24531809 24532242 -70740409 - L1MB7 LINE L1 -136 6048 5610 7 772 765 0 0 0 chr17 24532430 24532515 -70740136 + (GA)n Simple_repeat Simple_repeat 2 86 0 7 772 1307 102 37 0 chr17 24532861 24533048 -70739603 - B2_Mm2 SINE B2 -1 194 1 7 772 515 268 49 7 chr17 24533747 24533890 -70738761 - B1F2 SINE Alu 0 149 1 7 772 1662 26 5 0 chr17 24534752 24534942 -70737709 - B2_Mm1a SINE B2 -1 192 2 7 772 935 132 28 7 chr17 24536226 24536371 -70736280 - B1_Mur2 SINE Alu -1 148 1 7 772 556 180 99 0 chr17 24538315 24538426 -70734225 - B3 SINE B2 -93 123 2 7 772 356 115 375 9 chr17 24539717 24539821 -70732830 - B2_Mm2 SINE B2 -7 188 47 7 772 1149 92 0 0 chr17 24539867 24540019 -70732632 - B2_Mm2 SINE B2 -41 154 3 8 772 237 295 33 0 chr17 24540061 24540122 -70732529 - RSINE1 SINE B4 -36 129 67 8 772 453 295 16 8 chr17 24540336 24540459 -70732192 + PB1 SINE Alu 2 125 -2 8 772 1255 47 0 0 chr17 24540491 24540639 -70732012 + B1_Mus1 SINE Alu 1 148 0 8 772 393 75 0 0 chr17 24540639 24540692 -70731959 + (A)n Simple_repeat Simple_repeat 1 53 0 8 772 274 247 41 92 chr17 24540694 24540792 -70731859 + RSINE1 SINE B4 12 104 -61 8 772 444 330 48 43 chr17 24540795 24540982 -70731669 + B3A SINE B2 2 189 -9 8 772 1051 101 52 23 chr17 24541005 24541178 -70731473 + B2_Mm2 SINE B2 2 179 -16 8 772 207 0 0 0 chr17 24541180 24541203 -70731448 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 772 949 153 21 0 chr17 24541206 24541350 -70731301 + B1_Mur4 SINE Alu 3 149 -1 8 772 745 285 14 18 chr17 24541386 24541593 -70731058 + B3 SINE B2 2 208 -8 9 772 493 194 117 0 chr17 24541624 24541727 -70730924 + B3 SINE B2 97 211 -5 9 772 821 239 55 20 chr17 24543008 24543209 -70729442 - B3 SINE B2 -7 209 2 9 772 719 170 96 0 chr17 24543282 24543417 -70729234 + B1_Mur3 SINE Alu 2 149 0 9 772 901 153 0 34 chr17 24544032 24544181 -70728470 - B1_Mur3 SINE Alu 0 149 6 9 772 252 321 29 7 chr17 24546675 24546813 -70725838 + CR1_Mam LINE CR1 1494 1634 -570 9 772 599 260 186 23 chr17 24547317 24547537 -70725114 - MTEb LTR MaLR -1 378 123 9 772 478 183 17 126 chr17 24547799 24547816 -70724835 + MT2B LTR ERVL 152 155 -446 9 772 1065 73 0 7 chr17 24547816 24547953 -70724698 + B1_Mm SINE Alu 2 137 -10 9 772 306 0 0 0 chr17 24547953 24547987 -70724664 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 9 772 714 243 29 0 chr17 24548122 24548258 -70724393 - B1_Mur1 SINE Alu -8 141 2 1 772 382 124 26 110 chr17 24548322 24548439 -70724212 + B1_Mur3 SINE Alu 16 148 -1 1 772 284 250 12 24 chr17 24548440 24548522 -70724129 + MurSatRep1 Unknown Unknown 222 302 -1835 1 772 234 356 71 80 chr17 24548522 24548577 -70724074 - ID_B1 SINE B4 0 224 1 1 772 1061 132 12 23 chr17 24548577 24548748 -70723903 - B2_Mm2 SINE B2 -26 169 1 1 772 478 95 45 56 chr17 24548753 24548842 -70723809 - B1_Mus2 SINE Alu 0 147 60 1 772 1205 68 0 0 chr17 24549196 24549343 -70723308 - B1_Mus2 SINE Alu 0 147 1 1 772 762 65 352 0 chr17 24549417 24549556 -70723095 + B2_Mm1t SINE B2 2 189 -4 1 772 482 232 158 16 chr17 24549879 24550006 -70722645 + MT2A LTR ERVL 1 145 -388 1 772 531 290 129 10 chr17 24550026 24550228 -70722423 + MT2A LTR ERVL 188 413 -120 1 772 828 52 25 41 chr17 24550757 24550878 -70721773 + B1_Mus1 SINE Alu 1 119 -29 1 772 207 0 0 0 chr17 24550878 24550901 -70721750 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 772 228 186 143 55 chr17 24552686 24552777 -70719874 + MER33 DNA MER1_type 91 189 -135 1 772 447 160 238 10 chr17 24552807 24552908 -70719743 + B1_Mur1 SINE Alu 16 139 -10 1 772 265 152 152 55 chr17 24552961 24553051 -70719600 - B1_Mur4 SINE Alu -4 145 57 1 772 534 218 262 12 chr17 24553314 24553486 -70719165 + ID_B1 SINE B4 9 223 -1 1 772 366 243 160 28 chr17 24553528 24553634 -70719017 + B1_Mur3 SINE Alu 1 120 0 1 772 1050 98 35 0 chr17 24553651 24553794 -70718857 + B1_Mus1 SINE Alu 1 148 0 1 772 187 273 18 18 chr17 24554097 24554153 -70718498 - MIRb SINE MIR -8 260 205 1 772 375 202 244 0 chr17 24554306 24554425 -70718226 - B1_Mus1 SINE Alu 0 148 1 1 772 647 243 20 33 chr17 24556395 24556548 -70716103 - B3 SINE B2 0 198 48 1 772 1050 121 5 64 chr17 24556585 24556788 -70715863 - B2_Mm2 SINE B2 -4 191 1 1 772 415 149 0 0 chr17 24556983 24557050 -70715601 + B1_Mus1 SINE Alu 3 69 -79 1 772 209 333 0 0 chr17 24557144 24557219 -70715432 + (CCCCAG)n Simple_repeat Simple_repeat 1 75 0 1 772 658 237 36 0 chr17 24557396 24557535 -70715116 + RSINE1 SINE B4 3 146 -19 1 772 1158 48 7 0 chr17 24557641 24557787 -70714864 + B1_Mus2 SINE Alu 1 147 0 1 772 236 344 13 26 chr17 24557830 24557985 -70714666 + RSINE1 SINE B4 3 155 -10 1 772 1604 163 104 18 chr17 24558043 24558381 -70714270 - ORR1C1 LTR MaLR -5 373 7 1 772 384 311 12 18 chr17 24558432 24558562 -70714089 - PB1D7 SINE Alu -11 138 7 1 772 296 341 7 113 chr17 24558471 24558613 -70714038 - ID_B1 SINE B4 -48 176 50 1 772 240 59 0 0 chr17 24559869 24559903 -70712748 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 772 1122 22 0 7 chr17 24559903 24560042 -70712609 - B1_Mm SINE Alu -9 138 1 1 772 608 203 60 0 chr17 24560625 24560758 -70711893 + B1_Mur2 SINE Alu 2 142 -7 1 772 380 296 20 34 chr17 24561035 24561182 -70711469 - B1_Mur1 SINE Alu -1 148 4 1 772 302 229 130 40 chr17 24561185 24561285 -70711366 - PB1D10 SINE Alu -3 114 6 1 772 805 192 0 0 chr17 24561731 24561877 -70710774 + B1_Mur3 SINE Alu 4 149 0 1 772 1068 76 14 0 chr17 24563100 24563245 -70709406 + B1_Mus2 SINE Alu 1 147 0 1 772 228 178 0 0 chr17 24564341 24564386 -70708265 + PB1D10 SINE Alu 43 87 -30 1 772 24 0 0 0 chr17 24564865 24564889 -70707762 + AT_rich Low_complexity Low_complexity 1 24 0 1 772 510 195 73 8 chr17 24565053 24565177 -70707474 - ID_B1 SINE B4 0 224 93 1 772 28 0 0 0 chr17 24565191 24565219 -70707432 + AT_rich Low_complexity Low_complexity 1 28 0 1 772 1372 61 0 6 chr17 24565317 24565498 -70707153 + B2_Mm2 SINE B2 2 181 -14 1 772 297 299 102 65 chr17 24565541 24565558 -70707093 - B2_Mm1a SINE B2 0 193 172 1 772 1151 68 0 0 chr17 24565558 24565706 -70706945 - B1_Mus1 SINE Alu 0 148 1 1 772 746 196 56 20 chr17 24565706 24565874 -70706777 - B3 SINE B2 -22 171 1 1 772 363 381 37 5 chr17 24567264 24567454 -70705197 - B4A SINE B4 -76 216 21 1 772 2001 112 68 16 chr17 24567605 24568029 -70704622 - RMER21B LTR ERV1 0 947 451 1 772 217 263 42 10 chr17 24568142 24568238 -70704413 + (TTTG)n Simple_repeat Simple_repeat 1 99 0 1 772 1449 63 16 0 chr17 24568436 24568627 -70704024 - B2_Mm2 SINE B2 -1 194 1 1 772 257 233 100 0 chr17 24568627 24568687 -70703964 - RMER30 DNA MER1_type -127 75 10 1 772 207 0 0 0 chr17 24569246 24569269 -70703382 + (T)n Simple_repeat Simple_repeat 1 23 0 1 772 1231 27 0 0 chr17 24569269 24569416 -70703235 - B1_Mm SINE Alu 0 147 1 1 772 650 191 34 34 chr17 24569630 24569776 -70702875 - B1_Mus2 SINE Alu -1 146 1 1 772 761 194 0 0 chr17 24569827 24569961 -70702690 - B1_Mus2 SINE Alu -5 142 9 1 772 361 191 19 113 chr17 24569867 24569973 -70702678 - MT2B LTR ERVL -344 257 162 1 772 867 141 47 10 chr17 24570424 24570619 -70702032 - RMER6A LTR ERVK -149 541 311 1 772 1118 82 0 0 chr17 24570619 24570765 -70701886 - B1_Mus2 SINE Alu 0 147 2 1 772 575 236 76 30 chr17 24570765 24570805 -70701846 - RMER6A LTR ERVK -354 336 295 1 772 650 119 9 9 chr17 24571225 24571335 -70701316 + B1_Mur4 SINE Alu 41 150 0 1 772 198 0 0 0 chr17 24571335 24571357 -70701294 + (CAAAAA)n Simple_repeat Simple_repeat 6 27 0 1 772 786 156 117 63 chr17 24571800 24572005 -70700646 + B3 SINE B2 1 216 0 1 772 281 270 0 0 chr17 24572013 24572076 -70700575 - ID_B1 SINE B4 -89 135 73 1 772 720 137 24 24 chr17 24572199 24572326 -70700325 + B1_Mm SINE Alu 1 127 -20 1 772 300 196 248 43 chr17 24573481 24573598 -70699053 + B1_Mur3 SINE Alu 2 142 -7 1 772 271 274 186 0 chr17 24574853 24574977 -70697674 - B1F SINE Alu 0 149 3 1 772 1112 68 0 0 chr17 24574996 24575142 -70697509 - B1_Mus2 SINE Alu 0 147 2 1 772 258 375 8 45 chr17 24575372 24575416 -70697235 + ID_B1 SINE B4 44 172 -52 1 772 301 311 44 0 chr17 24575416 24575506 -70697145 + B1F SINE Alu 1 94 -55 1 772 1025 81 0 7 chr17 24575541 24575678 -70696973 + B1_Mus1 SINE Alu 3 138 -10 1 772 236 269 72 29 chr17 24575699 24575768 -70696883 - PB1D10 SINE Alu -13 104 33 1 772 244 271 0 66 chr17 24576045 24576136 -70696515 + RLTR25B LTR ERVK 437 521 -507 1 772 674 84 0 0 chr17 24576063 24576158 -70696493 + B1_Mus2 SINE Alu 53 147 0 1 772 680 228 115 16 chr17 24576309 24576492 -70696159 + B3 SINE B2 2 202 -14 1 772 219 36 0 0 chr17 24576507 24576535 -70696116 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 772 343 233 282 6 chr17 24576551 24576647 -70696004 + B4 SINE B4 4 123 -169 1 772 207 0 0 0 chr17 24576647 24576670 -70695981 + (TGGGGG)n Simple_repeat Simple_repeat 2 24 0 1 772 343 233 282 6 chr17 24576670 24576750 -70695901 + B4 SINE B4 124 228 -64 1 772 200 265 41 0 chr17 24577070 24577119 -70695532 + (CATG)n Simple_repeat Simple_repeat 3 53 0 1 772 278 319 42 11 chr17 24577779 24577874 -70694777 - MIR SINE MIR -79 183 86 1 772 301 83 0 20 chr17 24578132 24578168 -70694483 + HAL1-3A_ME LINE L1 1975 2010 -848 1 772 342 0 0 0 chr17 24578168 24578206 -70694445 + (CCA)n Simple_repeat Simple_repeat 1 38 0 1 772 301 83 0 20 chr17 24578206 24578218 -70694433 + HAL1-3A_ME LINE L1 2011 2021 -837 1 772 468 0 0 0 chr17 24580790 24580842 -70691809 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 772 492 292 51 0 chr17 24582647 24582784 -70689867 + ID_B1 SINE B4 81 224 0 1 772 1081 161 13 98 chr17 24587138 24587372 -70685279 - URR1B DNA MER1_type -6 219 6 1 772 271 312 0 0 chr17 24587414 24587478 -70685173 - ID4_ SINE ID -18 65 2 1 772 848 231 85 5 chr17 24587509 24587543 -70685108 - B3 SINE B2 0 216 183 1 772 189 0 0 0 chr17 24587543 24587564 -70685087 + (TATG)n Simple_repeat Simple_repeat 2 22 0 1 772 848 231 85 5 chr17 24587564 24587729 -70684922 - B3 SINE B2 -34 182 2 1 772 343 303 104 15 chr17 24587736 24587870 -70684781 - B1F SINE Alu -2 147 2 1 772 270 0 0 0 chr17 24588101 24588131 -70684520 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 772 425 157 0 28 chr17 24588903 24588975 -70683676 + ID4 SINE ID 1 70 -13 1 772 215 301 110 0 chr17 24589203 24589276 -70683375 - ID4_ SINE ID 0 83 3 1 772 1146 48 7 0 chr17 24589472 24589619 -70683032 + B1_Mus1 SINE Alu 1 148 0 1 772 456 199 3 0 chr17 24589637 24589730 -70682921 + B3 SINE B2 1 96 -99 1 772 398 200 87 43 chr17 24589732 24589847 -70682804 - B1_Mm SINE Alu -24 123 4 1 772 903 232 9 87 chr17 24589875 24590067 -70682584 - B3 SINE B2 0 216 42 1 772 1098 95 0 0 chr17 24590067 24590215 -70682436 - B1_Mus1 SINE Alu 0 148 1 1 772 903 232 9 87 chr17 24590215 24590253 -70682398 - B3 SINE B2 -175 41 4 1 772 746 169 235 0 chr17 24590686 24590869 -70681782 + URR1A DNA MER1_type 1 226 0 1 772 593 152 9 0 chr17 24590895 24591000 -70681651 + PB1D9 SINE Alu 15 120 0 1 772 927 107 30 0 chr17 24591017 24591148 -70681503 + B1_Mus1 SINE Alu 1 135 -13 1 772 288 0 0 0 chr17 24591148 24591180 -70681471 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1 772 319 127 0 35 chr17 24592571 24592628 -70680023 - B2_Mm2 SINE B2 -94 101 47 1 772 1163 101 77 0 chr17 24592701 24592870 -70679781 - B2_Mm2 SINE B2 -13 182 1 1 772 709 185 131 11 chr17 24592887 24593062 -70679589 - B3 SINE B2 0 216 21 1 772 342 137 32 8 chr17 24593197 24593298 -70679353 - B2_Mm2 SINE B2 -5 190 47 1 772 1081 75 50 0 chr17 24593350 24593511 -70679140 - B2_Mm1t SINE B2 -24 169 1 2 772 348 270 85 33 chr17 24593945 24594098 -70678553 - L1M4 LINE L1 -366 5812 5652 2 772 465 34 0 0 chr17 24594159 24594218 -70678433 + (TTTA)n Simple_repeat Simple_repeat 3 61 0 2 772 1088 103 0 0 chr17 24594219 24594374 -70678277 - B2_Mm2 SINE B2 -37 158 4 2 772 760 256 12 0 chr17 24594409 24594569 -70678082 + B3A SINE B2 2 163 -35 2 772 532 29 0 0 chr17 24594572 24594641 -70678010 - B2_Mm2 SINE B2 -124 71 3 2 772 257 226 0 0 chr17 24594728 24594781 -70677870 + RSINE1 SINE B4 37 89 -76 2 772 1115 68 0 0 chr17 24594844 24594991 -70677660 + B1_Mus1 SINE Alu 2 148 0 2 772 607 279 0 25 chr17 24595097 24595255 -70677396 + RSINE1 SINE B4 12 165 0 2 772 1025 129 6 12 chr17 24595424 24595597 -70677054 + B2_Mm2 SINE B2 1 172 -23 2 772 1259 56 61 0 chr17 24595600 24595780 -70676871 - B2_Mm1t SINE B2 -1 192 2 2 772 548 217 54 34 chr17 24595794 24595999 -70676652 - RMER17C LTR ERVK -135 275 67 2 772 738 256 18 0 chr17 24596020 24596184 -70676467 + B3 SINE B2 2 168 -48 2 772 313 241 118 24 chr17 24596189 24596274 -70676377 - B1_Mur2 SINE Alu -56 93 1 2 772 1482 33 49 0 chr17 24596370 24596553 -70676098 - B2_Mm1a SINE B2 -1 192 1 2 772 373 208 108 83 chr17 24596561 24596688 -70675963 - B3 SINE B2 -8 187 56 2 772 3343 30 0 0 chr17 24596688 24597084 -70675567 - MTA_Mm LTR MaLR 0 396 1 2 772 9245 14 3 0 chr17 24597084 24598179 -70674472 - MTA_Mm-int LTR MaLR 0 1098 1 2 772 3367 28 0 0 chr17 24598179 24598575 -70674076 - MTA_Mm LTR MaLR 0 396 1 2 772 373 169 93 82 chr17 24598575 24598626 -70674025 - B3 SINE B2 -161 55 3 2 772 662 244 27 81 chr17 24598632 24598855 -70673796 - B3 SINE B2 -5 211 1 2 772 421 113 0 27 chr17 24598856 24598929 -70673722 + B1F1 SINE Alu 79 149 0 2 772 282 203 76 30 chr17 24599748 24599814 -70672837 - B4A SINE B4 -97 195 127 2 772 243 0 0 0 chr17 24599845 24599872 -70672779 + (CTTG)n Simple_repeat Simple_repeat 2 28 0 2 772 488 133 235 0 chr17 24599910 24600008 -70672643 - B1_Mus1 SINE Alu -5 143 23 2 772 230 0 33 0 chr17 24600010 24600040 -70672611 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 772 428 260 91 8 chr17 24600186 24600318 -70672333 + B1F SINE Alu 1 143 -6 2 772 1757 170 129 2 chr17 24600374 24600769 -70671882 - BGLII_A LTR ERVK 0 445 1 2 772 1312 58 5 77 chr17 24601109 24601316 -70671335 - B2_Mm1a SINE B2 0 193 2 2 772 320 98 33 0 chr17 24601495 24601556 -70671095 + (TCTG)n Simple_repeat Simple_repeat 2 64 0 2 772 300 246 0 0 chr17 24601559 24601624 -70671027 - ID_B1 SINE B4 -17 207 143 2 772 230 0 0 32 chr17 24601627 24601658 -70670993 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2 772 648 232 104 35 chr17 24601658 24601859 -70670792 - B3 SINE B2 0 216 2 2 772 427 290 64 21 chr17 24601859 24601999 -70670652 - ID_B1 SINE B4 -78 146 1 2 772 335 227 52 52 chr17 24602002 24602118 -70670533 - PB1D9 SINE Alu -3 117 2 2 772 273 329 0 25 chr17 24602118 24602152 -70670499 + RSINE1 SINE B4 54 85 -80 2 772 1171 80 22 44 chr17 24602206 24602388 -70670263 + B2_Mm2 SINE B2 4 181 -14 2 772 988 65 65 0 chr17 24602399 24602537 -70670114 - B1_Mm SINE Alu 0 147 1 2 772 30 45 0 0 chr17 24602538 24602582 -70670069 + AT_rich Low_complexity Low_complexity 1 44 0 2 772 347 239 68 0 chr17 24602756 24602844 -70669807 - MTEa LTR MaLR -16 363 270 2 772 790 271 9 35 chr17 24602855 24603081 -70669570 + ID_B1 SINE B4 1 220 -4 2 772 1172 132 26 5 chr17 24603709 24603899 -70668752 - B2_Mm2 SINE B2 0 195 2 2 772 2799 60 0 18 chr17 24604389 24604779 -70667872 + L1Md_F2 LINE L1 6200 6582 0 2 772 663 125 71 92 chr17 24604994 24605135 -70667516 - B1_Mur3 SINE Alu -10 139 2 2 772 352 230 129 26 chr17 24605137 24605253 -70667398 + B3 SINE B2 60 187 -29 2 772 1149 61 0 0 chr17 24605283 24605431 -70667220 - B1_Mus1 SINE Alu 0 148 1 2 772 338 286 54 23 chr17 24605447 24605576 -70667075 - B3A SINE B2 -24 174 42 2 772 1532 179 20 108 chr17 24605584 24605984 -70666667 + RLTR24 LTR ERV1 1 365 -164 2 772 324 164 16 0 chr17 24605980 24606041 -70666610 + RLTR24 LTR ERV1 468 529 0 2 772 1500 58 0 0 chr17 24606052 24606240 -70666411 + B2_Mm1a SINE B2 2 189 -4 2 772 226 296 90 62 chr17 24606320 24606464 -70666187 + L1ME3 LINE L1 5965 6112 -50 2 772 1234 66 78 0 chr17 24606503 24606670 -70665981 + B2_Mm2 SINE B2 2 181 -14 2 772 353 217 7 55 chr17 24607354 24607500 -70665151 + (CGG)n Simple_repeat Simple_repeat 1 139 0 2 772 521 174 0 16 chr17 24616342 24616465 -70656186 + CT-rich Low_complexity Low_complexity 3 123 0 2 772 274 270 159 18 chr17 24616465 24616578 -70656073 - MER53 DNA hAT -64 129 1 2 772 28 29 0 0 chr17 24616659 24616694 -70655957 + AT_rich Low_complexity Low_complexity 1 35 0 2 772 338 56 0 36 chr17 24616903 24616959 -70655692 + B1_Mur4 SINE Alu 1 54 -96 2 772 1068 282 114 41 chr17 24617033 24617524 -70655127 - Lx5 LINE L1 -18 7032 6506 2 772 486 160 26 0 chr17 24617780 24617886 -70654765 - B1_Mur3 SINE Alu -21 128 15 2 772 246 32 0 0 chr17 24617908 24617939 -70654712 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 772 1250 41 0 0 chr17 24617942 24618088 -70654563 - B1_Mm SINE Alu -1 146 1 2 772 771 243 16 46 chr17 24618089 24618283 -70654368 - ID_B1 SINE B4 -3 221 34 2 772 210 71 0 0 chr17 24618330 24618358 -70654293 + (CG)n Simple_repeat Simple_repeat 2 29 0 2 772 306 0 0 0 chr17 24618358 24618391 -70654260 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 772 285 118 157 0 chr17 24618767 24618818 -70653833 + BC1_Mm scRNA scRNA 5 63 -89 2 772 836 155 49 0 chr17 24619007 24619149 -70653502 - B1_Mur3 SINE Alu 0 149 1 2 772 28 0 0 0 chr17 24619159 24619187 -70653464 + AT_rich Low_complexity Low_complexity 1 28 0 2 772 236 145 50 83 chr17 24619198 24619258 -70653393 - B2_Mm2 SINE B2 -91 104 47 2 772 1085 89 127 0 chr17 24619276 24619434 -70653217 - B2_Mm1t SINE B2 -14 179 2 2 772 1154 72 0 0 chr17 24619487 24619626 -70653025 + B1_Mus2 SINE Alu 1 139 -8 2 772 263 286 125 52 chr17 24619663 24619759 -70652892 - ID_B1 SINE B4 -21 203 101 2 772 1179 61 0 13 chr17 24619922 24619933 -70652718 - B1_Mus1 SINE Alu 0 148 139 2 772 221 0 35 0 chr17 24619933 24619962 -70652689 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2 772 1179 61 0 13 chr17 24619962 24620099 -70652552 - B1_Mus1 SINE Alu -10 138 2 2 772 598 252 4 21 chr17 24620260 24620452 -70652199 - B3A SINE B2 -8 187 2 2 772 383 242 0 59 chr17 24620581 24620682 -70651969 + PB1D10 SINE Alu 18 112 -5 2 772 881 269 50 30 chr17 24620742 24621103 -70651548 - L1MB7 LINE L1 -168 6016 5649 2 772 936 74 82 0 chr17 24621118 24621253 -70651398 - B1_Mus1 SINE Alu -1 147 2 2 772 1327 91 32 5 chr17 24621438 24621625 -70651026 - B2_Mm2 SINE B2 -2 193 2 2 772 1212 61 0 0 chr17 24622036 24622183 -70650468 + B1_Mus2 SINE Alu 1 147 0 2 772 202 302 115 16 chr17 24622345 24622506 -70650145 - MIR SINE MIR -23 245 60 2 772 207 0 0 0 chr17 24622513 24622536 -70650115 + (GCTG)n Simple_repeat Simple_repeat 3 25 0 2 772 249 289 142 3 chr17 24622778 24622931 -70649720 - MIRc SINE MIR -63 205 29 2 772 23 0 0 0 chr17 24622977 24623000 -70649651 + AT_rich Low_complexity Low_complexity 1 23 0 2 772 1189 68 0 0 chr17 24623000 24623146 -70649505 - B1_Mus1 SINE Alu -2 146 1 2 772 1097 67 0 0 chr17 24623398 24623533 -70649118 + B1_Mus1 SINE Alu 1 135 -13 2 772 183 42 0 0 chr17 24623533 24623557 -70649094 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2 772 664 287 39 0 chr17 24623594 24623775 -70648876 + MER115 DNA Tip100 489 676 -17 2 772 1209 41 7 7 chr17 24624089 24624237 -70648414 + B1_Mus1 SINE Alu 1 148 0 2 772 266 140 0 34 chr17 24624247 24624306 -70648345 + GA-rich Low_complexity Low_complexity 2 58 0 2 772 21 89 0 0 chr17 24625513 24625569 -70647082 + GC_rich Low_complexity Low_complexity 1 56 0 2 772 36 62 0 0 chr17 24625624 24625688 -70646963 + GC_rich Low_complexity Low_complexity 1 64 0 2 772 221 163 0 20 chr17 24625732 24625782 -70646869 + (CCCGAA)n Simple_repeat Simple_repeat 3 51 0 2 772 36 23 0 0 chr17 24626014 24626057 -70646594 + GC_rich Low_complexity Low_complexity 1 43 0 2 772 270 266 117 41 chr17 24627156 24627301 -70645350 + MIRc SINE MIR 68 223 -45 2 772 600 161 15 99 chr17 24627705 24627836 -70644815 + PB1D9 SINE Alu 1 120 0 2 772 372 22 0 0 chr17 24628138 24628183 -70644468 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 772 788 171 8 0 chr17 24628210 24628339 -70644312 + B1_Mur1 SINE Alu 1 130 -19 2 772 375 247 0 0 chr17 24628481 24628558 -70644093 - ID4 SINE ID -4 79 3 2 772 861 67 192 0 chr17 24628600 24628720 -70643931 + B1_Mus1 SINE Alu 1 143 -5 2 772 617 255 28 28 chr17 24628749 24628894 -70643757 - B1_Mur1 SINE Alu -1 148 4 2 772 266 293 0 109 chr17 24628812 24628904 -70643747 - MT2B LTR ERVL -362 239 158 2 772 585 178 0 0 chr17 24628910 24629028 -70643623 + C-rich Low_complexity Low_complexity 1 118 0 2 772 215 326 57 14 chr17 24629626 24629766 -70642885 - L2 LINE L2 -374 3045 2900 2 772 541 179 53 9 chr17 24629839 24629952 -70642699 - PB1D9 SINE Alu -2 118 1 2 772 1160 75 0 7 chr17 24629982 24630130 -70642521 + B1_Mus2 SINE Alu 1 147 0 2 772 223 310 99 0 chr17 24630193 24630264 -70642387 - RSINE1 SINE B4 -6 159 82 3 772 243 0 0 0 chr17 24630331 24630358 -70642293 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 3 772 317 333 29 0 chr17 24630358 24630463 -70642188 - PB1D10 SINE Alu -9 108 1 3 772 195 42 0 0 chr17 24630492 24630516 -70642135 + (CCTG)n Simple_repeat Simple_repeat 3 26 0 3 772 1070 61 0 7 chr17 24630516 24630663 -70641988 + (TTCC)n Simple_repeat Simple_repeat 4 150 0 3 772 243 0 0 0 chr17 24630707 24630734 -70641917 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 772 787 29 29 0 chr17 24630734 24630838 -70641813 - B1_Mus2 SINE Alu -1 146 40 3 772 273 158 0 50 chr17 24630788 24630848 -70641803 - 4.5SRNA scRNA scRNA -8 86 30 3 772 384 320 10 0 chr17 24630854 24630957 -70641694 - ID_B1 SINE B4 -39 185 82 3 772 198 0 0 0 chr17 24631192 24631214 -70641437 + (TTG)n Simple_repeat Simple_repeat 2 23 0 3 772 837 154 28 42 chr17 24631214 24631356 -70641295 - B1_Mur4 SINE Alu -10 140 1 3 772 531 0 0 0 chr17 24631361 24631420 -70641231 + (TCTG)n Simple_repeat Simple_repeat 4 62 0 3 772 327 104 0 0 chr17 24631430 24631478 -70641173 + (TATG)n Simple_repeat Simple_repeat 2 49 0 3 772 782 207 0 7 chr17 24631478 24631619 -70641032 - B1_Mur4 SINE Alu -9 141 2 3 772 254 297 0 0 chr17 24631883 24631947 -70640704 - MIRc SINE MIR -167 101 38 3 772 411 229 44 44 chr17 24634043 24634157 -70638494 + PB1D10 SINE Alu 3 116 -1 3 772 483 301 14 35 chr17 24634168 24634309 -70638342 + ID_B1 SINE B4 87 224 0 3 772 628 268 19 73 chr17 24634309 24634590 -70638061 + B4A SINE B4 1 233 -59 3 772 492 241 0 0 chr17 24634697 24634871 -70637780 + (CA)n Simple_repeat Simple_repeat 2 175 0 3 772 251 212 12 0 chr17 24634887 24634967 -70637684 + (CA)n Simple_repeat Simple_repeat 1 81 0 3 772 361 250 53 0 chr17 24635024 24635100 -70637551 + B4A SINE B4 213 292 0 3 772 355 169 62 0 chr17 24635147 24635212 -70637439 + ID4_ SINE ID 3 71 -12 3 772 1413 74 10 16 chr17 24635304 24635497 -70637154 - B2_Mm2 SINE B2 -1 194 3 3 772 290 257 46 65 chr17 24635521 24635629 -70637022 + MIRc SINE MIR 61 166 -102 3 772 1128 72 0 0 chr17 24637075 24637213 -70635438 + B1_Mus1 SINE Alu 2 139 -9 3 772 201 39 0 0 chr17 24638418 24638444 -70634207 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 772 450 135 21 53 chr17 24639494 24639588 -70633063 + PB1D10 SINE Alu 1 91 -26 3 773 943 135 14 0 chr17 24645901 24646042 -70626609 + B1_Mur1 SINE Alu 2 144 -5 3 773 612 0 0 0 chr17 24649523 24649591 -70623060 + (TCCC)n Simple_repeat Simple_repeat 3 70 0 3 773 676 188 113 0 chr17 24652883 24653016 -70619635 + B1_Mur2 SINE Alu 2 149 0 3 773 339 25 0 0 chr17 24653027 24653067 -70619584 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 773 181 312 15 15 chr17 24653174 24653239 -70619412 + L2 LINE L2 2846 2910 -509 3 773 1270 171 5 23 chr17 24653862 24654078 -70618573 - B3 SINE B2 0 216 5 3 773 294 185 0 18 chr17 24654108 24654163 -70618488 - PB1D9 SINE Alu -42 78 25 3 773 1240 42 0 0 chr17 24654402 24654545 -70618106 - B1_Mm SINE Alu -3 144 2 3 773 204 176 0 0 chr17 24654908 24654942 -70617709 + MIR SINE MIR 115 148 -60 3 773 501 115 0 0 chr17 24655923 24656010 -70616641 + (CATATA)n Simple_repeat Simple_repeat 2 88 0 3 773 1219 62 0 0 chr17 24658217 24658363 -70614288 + B1_Mm SINE Alu 2 147 0 3 773 875 148 28 14 chr17 24659163 24659307 -70613344 + B1_Mur4 SINE Alu 2 147 -3 3 773 602 258 36 6 chr17 24659330 24659498 -70613153 + B3 SINE B2 41 213 -3 3 773 1309 79 55 17 chr17 24659580 24659761 -70612890 - B2_Mm2 SINE B2 -7 188 1 3 773 1031 139 0 0 chr17 24659766 24659910 -70612741 - B1_Mur4 SINE Alu -5 145 2 3 773 297 317 77 0 chr17 24659919 24660023 -70612628 - PB1D7 SINE Alu -7 113 2 3 773 272 257 0 91 chr17 24660295 24660372 -70612279 - RSINE1 SINE B4 -87 78 9 3 773 460 196 62 0 chr17 24660380 24660477 -70612174 - B3 SINE B2 -113 103 1 3 773 1297 53 0 0 chr17 24660507 24660678 -70611973 + B2_Mm2 SINE B2 1 171 -24 3 773 202 89 0 62 chr17 24660730 24660759 -70611892 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 3 773 1197 82 0 0 chr17 24660759 24660905 -70611746 + B1_Mus2 SINE Alu 2 147 0 3 773 202 89 0 62 chr17 24660905 24660923 -70611728 + (TAAA)n Simple_repeat Simple_repeat 1 18 0 3 773 537 309 20 0 chr17 24660946 24661098 -70611553 - B3A SINE B2 -16 182 28 3 773 1127 103 0 0 chr17 24661101 24661247 -70611404 - B1_Mus1 SINE Alu -1 147 2 3 773 881 226 57 24 chr17 24661296 24661505 -70611146 - B3 SINE B2 0 216 1 3 773 414 88 0 0 chr17 24661565 24661633 -70611018 + (CA)n Simple_repeat Simple_repeat 2 69 0 3 773 304 331 30 15 chr17 24663046 24663178 -70609473 + MIRb SINE MIR 14 147 -121 3 773 397 305 59 18 chr17 24664221 24664391 -70608260 + MER20 DNA MER1_type 13 189 -30 3 773 253 279 0 0 chr17 24664426 24664487 -70608164 + L2a LINE L2 3346 3406 -20 3 773 192 152 0 0 chr17 24670619 24670652 -70601999 + (CAG)n Simple_repeat Simple_repeat 3 35 0 3 773 1378 95 5 0 chr17 24671227 24671416 -70601235 - B2_Mm1a SINE B2 -3 190 1 3 773 195 42 0 0 chr17 24671526 24671550 -70601101 + (TTAGGG)n Simple_repeat Simple_repeat 3 26 0 3 773 279 325 74 8 chr17 24672509 24672630 -70600021 + L2b LINE L2 3228 3356 -19 3 773 719 219 0 28 chr17 24672669 24672810 -70599841 + B1_Mur1 SINE Alu 5 141 -8 3 773 832 156 49 14 chr17 24672834 24672977 -70599674 + B1_Mur2 SINE Alu 1 148 -1 3 773 613 184 181 16 chr17 24672995 24673122 -70599529 + B1_Mus1 SINE Alu 1 148 0 3 773 378 250 0 11 chr17 24673305 24673394 -70599257 - PB1D10 SINE Alu -17 100 13 3 773 442 229 49 0 chr17 24674567 24674689 -70597962 + MIR3 SINE MIR 78 205 -3 3 773 275 0 29 0 chr17 24674748 24674783 -70597868 + (GA)n Simple_repeat Simple_repeat 1 36 0 3 773 602 313 16 74 chr17 24675516 24675758 -70596893 + B4A SINE B4 2 229 -63 3 773 1247 48 0 0 chr17 24675758 24675905 -70596746 + B1_Mus1 SINE Alu 2 148 0 3 773 195 80 80 0 chr17 24675916 24675966 -70596685 + A-rich Low_complexity Low_complexity 5 58 0 3 773 938 233 64 0 chr17 24675975 24676177 -70596474 + B3 SINE B2 2 216 0 3 773 1166 51 0 0 chr17 24676199 24676337 -70596314 + B1_Mus2 SINE Alu 1 138 -9 3 773 207 0 0 0 chr17 24676337 24676360 -70596291 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 773 435 38 0 0 chr17 24676362 24676415 -70596236 + (TAA)n Simple_repeat Simple_repeat 2 54 0 3 773 528 145 138 52 chr17 24676423 24676539 -70596112 + B1_Mur2 SINE Alu 9 134 -15 3 773 225 264 19 0 chr17 24676595 24676648 -70596003 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 773 307 307 0 0 chr17 24676670 24676758 -70595893 + Lx8 LINE L1 7037 7124 -349 3 773 282 296 34 75 chr17 24676894 24677003 -70595648 + RMER15 LTR ERVL 434 539 -36 3 773 1406 88 5 45 chr17 24677003 24677205 -70595446 + B2_Mm2 SINE B2 2 195 0 3 773 282 296 34 75 chr17 24677205 24677241 -70595410 + RMER15 LTR ERVL 540 573 -2 3 773 237 0 43 65 chr17 24677250 24677296 -70595355 + (TTTTTA)n Simple_repeat Simple_repeat 6 50 0 3 773 505 127 0 0 chr17 24677666 24677745 -70594906 - B1_Mus2 SINE Alu -67 80 2 3 773 247 267 67 0 chr17 24677745 24677797 -70594854 - B1_Mus2 SINE Alu -61 86 31 3 773 286 212 0 167 chr17 24677745 24677762 -70594889 - MT2B LTR ERVL -364 237 158 3 773 813 197 169 0 chr17 24677875 24678053 -70594598 - B3 SINE B2 -6 210 3 3 773 495 0 0 0 chr17 24678207 24678262 -70594389 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 3 773 364 306 56 0 chr17 24678281 24678389 -70594262 + PB1D7 SINE Alu 5 118 -2 3 773 711 196 14 0 chr17 24678395 24678533 -70594118 + B1_Mus1 SINE Alu 7 146 -2 3 773 255 125 0 0 chr17 24678533 24678573 -70594078 + (TAG)n Simple_repeat Simple_repeat 1 40 0 3 773 1244 61 0 0 chr17 24678579 24678726 -70593925 + B1_Mus2 SINE Alu 1 147 0 3 773 315 190 23 92 chr17 24678757 24678844 -70593807 + MT2B LTR ERVL 177 257 -344 3 773 604 171 48 16 chr17 24678766 24678891 -70593760 + B1_Mus1 SINE Alu 20 148 0 3 773 1029 97 7 0 chr17 24678953 24679098 -70593553 - B1_Mus2 SINE Alu 0 147 2 3 773 302 250 20 33 chr17 24679098 24679128 -70593523 - ORR1B1-int LTR MaLR -861 648 620 3 773 1419 73 0 35 chr17 24679128 24679153 -70593498 - B2_Mm2 SINE B2 0 195 176 3 773 429 20 0 0 chr17 24679153 24679203 -70593448 + (TTTC)n Simple_repeat Simple_repeat 2 51 0 3 773 1419 73 0 35 chr17 24679203 24679375 -70593276 - B2_Mm2 SINE B2 -20 175 5 3 773 302 250 20 33 chr17 24679375 24679391 -70593260 - ORR1B1-int LTR MaLR -890 619 604 3 773 483 263 43 49 chr17 24679410 24679574 -70593077 - RSINE1 SINE B4 0 165 3 3 773 660 59 0 0 chr17 24679654 24679739 -70592912 + (TTTC)n Simple_repeat Simple_repeat 2 86 0 3 773 1203 57 0 0 chr17 24679741 24679882 -70592769 - B1_Mus2 SINE Alu -6 141 1 3 773 239 0 32 0 chr17 24679909 24679940 -70592711 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 3 773 747 237 58 6 chr17 24679951 24680125 -70592526 + B3A SINE B2 3 185 -13 3 773 303 148 12 32 chr17 24680183 24680245 -70592406 + B1_Mus1 SINE Alu 1 67 -83 3 773 1036 103 0 40 chr17 24680261 24680413 -70592238 + B1_Mus1 SINE Alu 2 147 -1 3 773 210 227 0 22 chr17 24680423 24680468 -70592183 + B3A SINE B2 39 82 -116 3 773 477 0 0 0 chr17 24680523 24680576 -70592075 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 773 1150 79 0 0 chr17 24680608 24680748 -70591903 + B1_Mus2 SINE Alu 1 140 -7 4 773 183 100 0 0 chr17 24680748 24680778 -70591873 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 4 773 821 182 1 0 chr17 24680964 24681099 -70591552 + B1_Mur2 SINE Alu 1 133 -16 4 773 1135 81 128 0 chr17 24681099 24681271 -70591380 - B2_Mm2 SINE B2 0 195 2 4 773 311 315 78 30 chr17 24681271 24681303 -70591348 + FAM SINE Alu 280 311 0 4 773 186 167 0 0 chr17 24681303 24681339 -70591312 + (TAA)n Simple_repeat Simple_repeat 1 36 0 4 773 521 250 81 16 chr17 24681366 24681594 -70591057 - RMER4B LTR ERVK -6 579 299 4 773 330 172 38 19 chr17 24681598 24681758 -70590893 + (CAG)n Simple_repeat Simple_repeat 2 164 0 4 773 355 172 15 22 chr17 24681799 24681936 -70590715 + (CAG)n Simple_repeat Simple_repeat 2 137 0 4 773 284 245 112 194 chr17 24681943 24681996 -70590655 - RMER4B LTR ERVK -323 262 67 4 773 624 121 0 0 chr17 24682003 24682094 -70590557 + B1_Mm SINE Alu 1 91 -56 4 773 375 277 78 28 chr17 24682094 24682137 -70590514 + ID_B1 SINE B4 92 221 -3 4 773 810 119 271 0 chr17 24682141 24682292 -70590359 + B2_Mm1t SINE B2 1 192 -1 4 773 284 245 112 194 chr17 24682292 24682321 -70590330 - RMER4B LTR ERVK -523 62 41 4 773 933 151 87 22 chr17 24682321 24682504 -70590147 - B2_Mm2 SINE B2 0 195 1 4 773 284 245 112 194 chr17 24682504 24682543 -70590108 - RMER4B LTR ERVK -545 40 17 4 773 476 254 154 1 chr17 24682551 24682687 -70589964 + B3A SINE B2 4 150 -48 4 773 468 0 0 0 chr17 24682687 24682739 -70589912 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 773 329 281 101 12 chr17 24682739 24682771 -70589880 + B2_Mm2 SINE B2 149 186 -9 4 773 647 180 78 0 chr17 24682791 24682919 -70589732 - B1_Mur1 SINE Alu 0 149 12 4 773 298 288 97 90 chr17 24682799 24682944 -70589707 - B4 SINE B4 -74 218 73 4 773 871 126 0 7 chr17 24683714 24683850 -70588801 - B1_Mus1 SINE Alu -5 143 9 4 773 180 0 0 0 chr17 24683888 24683908 -70588743 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 4 773 1159 96 0 0 chr17 24683924 24684070 -70588581 - B1_Mus2 SINE Alu -1 146 1 4 773 611 175 71 0 chr17 24684080 24684206 -70588445 - B1F2 SINE Alu -6 143 9 4 773 407 267 43 43 chr17 24684206 24684221 -70588430 - ID_B1 SINE B4 -6 218 78 4 773 26 0 0 0 chr17 24684221 24684247 -70588404 + AT_rich Low_complexity Low_complexity 1 26 0 4 773 507 140 129 0 chr17 24684247 24684340 -70588311 + PB1D9 SINE Alu 10 114 -6 4 773 1249 21 7 7 chr17 24684344 24684490 -70588161 + B1_Mm SINE Alu 1 146 -1 4 773 654 229 56 14 chr17 24684511 24684653 -70587998 + B1_Mur1 SINE Alu 2 149 0 4 773 490 241 34 8 chr17 24684692 24684809 -70587842 + PB1D7 SINE Alu 1 120 0 4 773 347 242 109 20 chr17 24684820 24684921 -70587730 + PB1D9 SINE Alu 1 110 -10 4 773 777 182 7 45 chr17 24685019 24685174 -70587477 + B1_Mur3 SINE Alu 1 149 0 4 773 1145 69 7 0 chr17 24685376 24685521 -70587130 - B1_Mus2 SINE Alu -1 146 1 4 773 849 115 23 8 chr17 24686309 24686440 -70586211 - B1_Mur4 SINE Alu -15 135 3 4 773 301 352 76 36 chr17 24688109 24688333 -70584318 - MIR SINE MIR 0 262 30 4 773 233 29 0 29 chr17 24688404 24688439 -70584212 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 773 1085 80 0 0 chr17 24688446 24688583 -70584068 - B1_Mus1 SINE Alu -11 137 1 4 773 456 185 25 0 chr17 24689775 24689856 -70582795 - B1_Mur3 SINE Alu -66 83 1 4 773 434 222 97 53 chr17 24689880 24689994 -70582657 - PB1D7 SINE Alu -1 119 1 4 773 377 155 70 23 chr17 24690393 24690479 -70582172 + B1_Mm SINE Alu 58 147 0 4 773 383 286 26 26 chr17 24690510 24690625 -70582026 + PB1D7 SINE Alu 6 120 0 4 773 1519 49 16 16 chr17 24690653 24690841 -70581810 + B2_Mm2 SINE B2 2 189 -6 4 773 346 261 60 30 chr17 24690924 24691058 -70581593 + L1MB7 LINE L1 6028 6165 -19 4 773 301 358 21 0 chr17 24691134 24691229 -70581422 + B1F2 SINE Alu 2 98 -51 4 773 684 178 9 0 chr17 24691668 24691775 -70580876 - PB1D9 SINE Alu -12 108 1 4 773 242 318 76 99 chr17 24691845 24692016 -70580635 + MIRb SINE MIR 22 188 -88 4 773 390 219 93 19 chr17 24692472 24692579 -70580072 - PB1 SINE Alu 0 127 13 4 773 393 289 53 0 chr17 24692607 24692721 -70579930 - PB1D7 SINE Alu 0 120 1 4 773 28 71 0 0 chr17 24692732 24692788 -70579863 + AT_rich Low_complexity Low_complexity 1 56 0 4 773 954 158 0 20 chr17 24692788 24692937 -70579714 - B1_Mus2 SINE Alu -1 146 1 4 773 338 285 188 62 chr17 24692943 24693119 -70579532 - B3A SINE B2 0 198 1 4 773 359 167 155 10 chr17 24693131 24693228 -70579423 - ID_B1 SINE B4 -1 223 113 4 773 216 67 0 0 chr17 24693295 24693325 -70579326 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 773 295 211 189 0 chr17 24693340 24693430 -70579221 - B1F2 SINE Alu -20 129 23 4 773 269 216 138 64 chr17 24693687 24693796 -70578855 - PB1D10 SINE Alu 0 117 1 4 773 190 200 0 43 chr17 24694181 24694228 -70578423 + L2 LINE L2 479 523 -2896 4 773 331 287 104 37 chr17 24695739 24695902 -70576749 - MER113 DNA MER1_type -101 420 247 4 773 229 196 0 0 chr17 24696809 24696865 -70575786 + T-rich Low_complexity Low_complexity 1 56 0 4 773 1205 55 0 7 chr17 24696865 24697013 -70575638 - B1_Mm SINE Alu 0 147 1 4 773 1224 69 68 17 chr17 24697019 24697196 -70575455 - B2_Mm2 SINE B2 -9 186 1 4 773 234 28 28 0 chr17 24697580 24697616 -70575035 - B1_Mus2 SINE Alu 0 147 111 4 773 648 221 28 7 chr17 24698884 24699025 -70573626 - B1_Mm SINE Alu -2 145 2 4 773 207 0 0 0 chr17 24699101 24699124 -70573527 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 773 980 66 0 122 chr17 24699147 24699303 -70573348 - B1_Mm SINE Alu -10 137 1 4 773 1091 184 24 5 chr17 24699331 24699538 -70573113 - B3 SINE B2 -5 211 1 4 773 820 180 72 0 chr17 24699595 24699734 -70572917 + B1_Mur2 SINE Alu 1 149 0 4 773 673 223 81 7 chr17 24699784 24699933 -70572718 - B4 SINE B4 -127 165 6 4 773 323 212 12 48 chr17 24700201 24700285 -70572366 - B4 SINE B4 -209 83 3 4 773 205 320 10 58 chr17 24703501 24703604 -70569047 - MIRm SINE MIR -139 137 40 4 773 383 208 0 0 chr17 24704949 24705021 -70567630 - PB1D10 SINE Alu 0 117 46 4 773 242 273 26 0 chr17 24707214 24707291 -70565360 - ID4_ SINE ID -4 79 1 4 773 216 282 182 33 chr17 24707789 24707910 -70564741 - MIR SINE MIR -119 143 5 4 773 273 313 59 20 chr17 24713715 24713816 -70558835 + PB1D10 SINE Alu 13 117 0 4 773 319 309 0 0 chr17 24718861 24718942 -70553709 + ID4 SINE ID 1 81 -2 4 773 510 175 52 111 chr17 24719128 24719263 -70553388 - B1_Mur1 SINE Alu -22 127 1 4 773 293 330 117 0 chr17 24719302 24719405 -70553246 + RSINE1 SINE B4 12 126 -39 4 773 1123 55 7 52 chr17 24719407 24719561 -70553090 + B1_Mus2 SINE Alu 1 147 0 4 773 582 203 84 63 chr17 24719586 24719728 -70552923 + B1_Mur2 SINE Alu 5 149 0 4 773 1219 74 0 0 chr17 24719732 24719880 -70552771 + B1_Mus1 SINE Alu 1 148 0 4 773 2963 80 5 2 chr17 24719903 24720303 -70552348 + L1_Mus3 LINE L1 6237 6637 -1 4 773 1219 75 0 0 chr17 24720337 24720484 -70552167 + B1_Mus1 SINE Alu 2 148 0 4 773 198 0 0 0 chr17 24720487 24720509 -70552142 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 4 773 349 236 146 0 chr17 24720544 24720633 -70552018 + RSINE1 SINE B4 26 127 -38 4 773 1371 273 79 39 chr17 24720675 24721244 -70551407 - Lx6 LINE L1 -27 7433 6486 4 773 794 164 23 0 chr17 24721333 24721461 -70551190 + B1_Mus1 SINE Alu 5 135 -13 4 773 291 312 123 0 chr17 24721616 24721754 -70550897 - Tigger6b DNA MER2_type -349 1248 1094 4 773 23 33 0 0 chr17 24721865 24721895 -70550756 + AT_rich Low_complexity Low_complexity 1 30 0 4 773 296 282 75 22 chr17 24721975 24722109 -70550542 - Tigger6b DNA MER2_type -1188 409 269 4 773 306 273 30 97 chr17 24722258 24722312 -70550339 + PB1 SINE Alu 1 51 -76 4 773 222 37 0 0 chr17 24722312 24722339 -70550312 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 4 773 306 273 30 97 chr17 24722339 24722418 -70550233 + PB1 SINE Alu 52 125 -2 4 773 239 305 37 0 chr17 24722431 24722513 -70550138 + BC1_Mm scRNA scRNA 3 87 -65 4 773 673 302 66 31 chr17 24723601 24723864 -70548787 + L1M4 LINE L1 3177 3446 -2700 4 773 697 160 136 8 chr17 24723864 24723996 -70548655 + B1_Mur4 SINE Alu 1 149 -1 4 773 673 302 66 31 chr17 24723996 24724081 -70548570 + L1M4 LINE L1 3447 3537 -2609 4 773 756 150 24 0 chr17 24725492 24725619 -70547032 - B1_Mus2 SINE Alu 0 147 18 4 773 486 0 0 0 chr17 24725620 24725674 -70546977 + (CCA)n Simple_repeat Simple_repeat 2 55 0 4 773 393 117 0 0 chr17 24726038 24726098 -70546553 + (T)n Simple_repeat Simple_repeat 1 60 0 4 773 1294 27 0 0 chr17 24726098 24726245 -70546406 - B1_Mus1 SINE Alu 0 148 2 4 773 201 176 0 0 chr17 24726940 24726974 -70545677 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 4 773 1247 54 0 0 chr17 24726989 24727137 -70545514 + B1_Mus1 SINE Alu 1 148 0 4 773 339 85 0 0 chr17 24727188 24727235 -70545416 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 4 773 1175 75 0 7 chr17 24727237 24727385 -70545266 - B1_Mus2 SINE Alu 0 147 1 4 773 386 319 0 140 chr17 24729058 24729244 -70543407 + Charlie12 DNA MER1_type 14 173 -2700 4 773 266 323 41 10 chr17 24729180 24729277 -70543374 - RMER30 DNA MER1_type -100 102 3 4 773 1286 139 0 0 chr17 24729822 24730009 -70542642 - B2_Mm2 SINE B2 -8 187 1 4 773 207 0 0 0 chr17 24739245 24739268 -70533383 + (GGGTG)n Simple_repeat Simple_repeat 4 26 0 4 773 243 278 148 16 chr17 24739546 24739674 -70532977 + MLT1B LTR MaLR 28 172 -218 5 773 300 318 98 0 chr17 24739785 24739917 -70532734 + MLT1B LTR MaLR 218 362 -28 5 773 761 198 26 3 chr17 24740410 24740587 -70532064 + B3 SINE B2 8 197 -1 5 773 261 0 0 0 chr17 24740603 24740632 -70532019 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 773 1042 147 0 7 chr17 24740632 24740783 -70531868 + B1_Mur4 SINE Alu 1 150 0 5 773 550 122 0 20 chr17 24740827 24740927 -70531724 + (GGA)n Simple_repeat Simple_repeat 3 100 0 5 773 795 37 9 0 chr17 24744830 24744937 -70527714 - B1_Mus2 SINE Alu -2 145 38 5 773 516 32 0 0 chr17 24746213 24746275 -70526376 + (TC)n Simple_repeat Simple_repeat 1 62 0 5 773 978 36 0 35 chr17 24746275 24746417 -70526234 + (TTCC)n Simple_repeat Simple_repeat 3 139 0 5 773 396 0 0 0 chr17 24747661 24747705 -70524946 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 773 1608 136 136 3 chr17 24747742 24748059 -70524592 + ORR1B2 LTR MaLR 1 359 -8 5 773 3526 25 2 0 chr17 24748280 24748675 -70523976 + MTA_Mm LTR MaLR 1 396 0 5 773 8725 36 50 2 chr17 24748677 24749725 -70522926 + MTA_Mm-int LTR MaLR 1 1098 0 5 773 3526 25 2 0 chr17 24749725 24750120 -70522531 + MTA_Mm LTR MaLR 1 396 0 5 773 616 159 38 45 chr17 24753621 24753753 -70518898 + B1_Mur4 SINE Alu 19 149 -1 5 773 510 243 30 73 chr17 24753753 24753917 -70518734 + RSINE1 SINE B4 5 161 -4 5 773 306 217 124 0 chr17 24753965 24754066 -70518585 + B1F SINE Alu 10 139 -10 5 773 1454 0 6 0 chr17 24754074 24754240 -70518411 + (GGAAA)n Simple_repeat Simple_repeat 3 169 0 5 773 207 0 0 0 chr17 24754340 24754363 -70518288 + (CAA)n Simple_repeat Simple_repeat 1 23 0 5 773 397 318 106 49 chr17 24754586 24754851 -70517800 + B4 SINE B4 1 280 -12 5 773 260 253 107 0 chr17 24755045 24755120 -70517531 + L1MB8 LINE L1 5771 5853 -321 5 773 250 149 0 21 chr17 24755325 24755373 -70517278 + B1F SINE Alu 103 149 0 5 773 269 357 0 9 chr17 24755398 24755511 -70517140 + L1MB8 LINE L1 6058 6169 -9 5 773 1009 53 105 0 chr17 24760854 24760987 -70511664 + B1_Mm SINE Alu 1 147 0 5 773 307 356 0 28 chr17 24761725 24761904 -70510747 + (CCCA)n Simple_repeat Simple_repeat 3 176 0 5 773 1575 177 36 82 chr17 24762475 24762769 -70509882 + ORR1B1 LTR MaLR 47 353 -41 5 773 1098 115 0 0 chr17 24762769 24762917 -70509734 + B1_Mus1 SINE Alu 1 148 0 5 773 1575 177 36 82 chr17 24762917 24762978 -70509673 + ORR1B1 LTR MaLR 354 386 -8 5 773 188 346 24 36 chr17 24763530 24763614 -70509037 - MIRc SINE MIR -141 127 45 5 773 185 312 91 0 chr17 24763804 24763881 -70508770 - L2a LINE L2 -28 3398 3315 5 773 377 20 20 0 chr17 24763899 24763949 -70508702 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 773 972 186 68 29 chr17 24763949 24764154 -70508497 + B3 SINE B2 2 214 -2 5 773 921 177 0 0 chr17 24764179 24764326 -70508325 + B1_Mur1 SINE Alu 2 148 -1 5 773 383 303 40 47 chr17 24764345 24764494 -70508157 + RSINE1 SINE B4 2 149 -16 5 773 838 143 8 0 chr17 24764549 24764682 -70507969 + B1_Mur4 SINE Alu 5 138 -12 5 773 246 32 0 0 chr17 24764683 24764714 -70507937 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 5 773 273 279 25 0 chr17 24764836 24764915 -70507736 - ID4_ SINE ID -1 82 2 5 773 461 208 29 36 chr17 24767289 24767418 -70505233 + PB1D10 SINE Alu 1 126 -22 5 773 371 256 45 67 chr17 24767606 24767740 -70504911 + B1F1 SINE Alu 19 149 0 5 773 225 222 0 0 chr17 24768062 24768125 -70504526 + CT-rich Low_complexity Low_complexity 1 63 0 5 773 1162 76 123 39 chr17 24768260 24768398 -70504253 + B2_Mm2 SINE B2 1 160 -35 5 773 483 18 0 0 chr17 24768398 24768454 -70504197 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 773 1162 76 123 39 chr17 24768454 24768494 -70504157 + B2_Mm2 SINE B2 161 194 -1 5 773 288 0 0 0 chr17 24771213 24771245 -70501406 + (CATA)n Simple_repeat Simple_repeat 2 33 0 5 773 201 229 32 16 chr17 24772003 24772065 -70500586 + CT-rich Low_complexity Low_complexity 2 64 0 5 774 1096 75 0 27 chr17 24773001 24773151 -70499500 - B1_Mur4 SINE Alu 0 150 5 5 774 199 261 77 0 chr17 24773257 24773322 -70499329 - L2b LINE L2 -276 3099 3030 5 774 227 286 35 35 chr17 24774075 24774162 -70498489 + MIRb SINE MIR 63 149 -119 5 774 323 23 0 22 chr17 24774792 24774837 -70497814 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 5 774 346 245 138 0 chr17 24774837 24774931 -70497720 - PB1D7 SINE Alu -13 107 1 5 774 577 126 21 21 chr17 24774949 24775046 -70497605 - B1_Mm SINE Alu 0 147 51 5 774 684 176 0 44 chr17 24775044 24775181 -70497470 + B1_Mus1 SINE Alu 18 148 0 5 774 257 191 60 0 chr17 24776915 24776999 -70495652 + (TCTCTG)n Simple_repeat Simple_repeat 1 89 0 5 774 333 118 0 0 chr17 24777661 24777712 -70494939 + (CACG)n Simple_repeat Simple_repeat 1 51 0 5 774 659 186 0 17 chr17 24778020 24778140 -70494511 - B1_Mus1 SINE Alu -1 147 30 5 774 1178 69 0 0 chr17 24778268 24778413 -70494238 + B1_Mus2 SINE Alu 1 145 -2 5 774 1098 123 0 0 chr17 24778413 24778584 -70494067 + (GAA)n Simple_repeat Simple_repeat 2 172 0 5 774 276 30 0 0 chr17 24778584 24778617 -70494034 + (TAG)n Simple_repeat Simple_repeat 1 33 0 5 774 373 290 19 65 chr17 24780356 24780463 -70492188 - PB1D7 SINE Alu -12 108 7 5 774 263 293 9 124 chr17 24780370 24780483 -70492168 - MT2B LTR ERVL -352 249 150 5 774 200 156 0 43 chr17 24783570 24783591 -70489060 + A-rich Low_complexity Low_complexity 5 23 0 5 774 1207 41 7 7 chr17 24783591 24783738 -70488913 + B1_Mus2 SINE Alu 1 147 0 5 774 200 156 0 43 chr17 24783738 24783763 -70488888 + A-rich Low_complexity Low_complexity 24 48 0 5 774 243 0 0 0 chr17 24785035 24785062 -70487589 + (TC)n Simple_repeat Simple_repeat 2 28 0 5 774 513 0 0 0 chr17 24785062 24785118 -70487533 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 774 180 152 0 0 chr17 24786276 24786309 -70486342 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 774 513 0 0 0 chr17 24786309 24786366 -70486285 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 774 287 295 19 0 chr17 24787233 24787338 -70485313 + C-rich Low_complexity Low_complexity 3 109 0 5 774 249 86 0 0 chr17 24788130 24788165 -70484486 - MIRm SINE MIR -126 150 116 5 774 297 247 116 21 chr17 24789235 24789330 -70483321 + B3 SINE B2 28 131 -85 5 774 798 261 80 0 chr17 24789406 24789605 -70483046 + ID_B1 SINE B4 2 216 -8 5 774 222 37 0 0 chr17 24789605 24789632 -70483019 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 774 819 247 10 41 chr17 24789635 24789829 -70482822 + B3A SINE B2 3 190 -8 5 774 533 171 0 0 chr17 24789901 24789989 -70482662 + PB1D9 SINE Alu 26 113 -7 5 774 304 200 73 24 chr17 24790566 24790648 -70482003 + RLTR25B LTR ERVK 424 509 -519 5 774 830 9 0 18 chr17 24790584 24790693 -70481958 + B1_Mm SINE Alu 41 147 0 5 774 213 0 81 0 chr17 24790699 24790736 -70481915 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 5 774 636 145 55 31 chr17 24791875 24791990 -70480661 + B1_Mur4 SINE Alu 20 138 -12 5 774 246 32 0 0 chr17 24791990 24792021 -70480630 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 774 636 145 55 31 chr17 24792021 24792033 -70480618 + B1_Mur4 SINE Alu 139 150 0 5 774 468 282 99 0 chr17 24792088 24792230 -70480421 + RSINE1 SINE B4 3 158 -7 5 774 408 214 204 0 chr17 24792276 24792379 -70480272 + RSINE1 SINE B4 3 126 -39 5 774 274 132 66 165 chr17 24792400 24792491 -70480160 + RLTR25B LTR ERVK 428 509 -519 5 774 743 53 49 66 chr17 24792414 24792516 -70480135 + B1_Mus2 SINE Alu 28 134 -13 5 774 940 106 0 27 chr17 24792516 24792700 -70479951 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 5 774 1455 64 27 0 chr17 24792702 24792889 -70479762 + B2_Mm1a SINE B2 2 193 0 5 774 743 53 49 66 chr17 24792889 24792905 -70479746 + B1_Mus2 SINE Alu 135 147 0 5 774 621 278 61 0 chr17 24792936 24793116 -70479535 + B3 SINE B2 1 191 -25 5 774 531 0 0 0 chr17 24793460 24793519 -70479132 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 774 446 305 16 8 chr17 24793519 24793639 -70479012 - B1F SINE Alu -27 122 1 5 774 699 228 42 36 chr17 24794637 24794723 -70477928 + ID SINE ID 1 87 -137 5 774 327 233 136 0 chr17 24794723 24794826 -70477825 + PB1D10 SINE Alu 1 117 0 5 774 225 175 0 0 chr17 24795273 24795313 -70477338 + (CAG)n Simple_repeat Simple_repeat 3 42 0 5 774 205 171 0 0 chr17 24795542 24795577 -70477074 + GA-rich Low_complexity Low_complexity 6 40 0 5 774 1172 49 21 0 chr17 24796334 24796476 -70476175 + B1_Mm SINE Alu 1 145 -2 5 774 579 269 31 0 chr17 24796619 24796749 -70475902 - ID_B1 SINE B4 -10 214 81 5 774 777 204 125 0 chr17 24796915 24797091 -70475560 + B3 SINE B2 6 203 -13 5 774 1091 177 75 5 chr17 24798080 24798279 -70474372 + B3 SINE B2 4 216 0 5 774 539 12 0 48 chr17 24798300 24798384 -70474267 + (TCCA)n Simple_repeat Simple_repeat 2 81 0 5 774 898 110 0 0 chr17 24798445 24798572 -70474079 - B1_Mus1 SINE Alu 0 148 22 5 774 378 182 35 124 chr17 24798490 24798603 -70474048 - MT2B LTR ERVL -344 257 155 5 774 824 95 78 110 chr17 24798605 24798759 -70473892 + B1_Mur3 SINE Alu 1 149 0 5 774 183 156 0 0 chr17 24798812 24798844 -70473807 + GA-rich Low_complexity Low_complexity 4 35 0 5 774 510 310 49 0 chr17 24798856 24798998 -70473653 + RSINE1 SINE B4 11 159 -6 5 774 1078 64 35 28 chr17 24799372 24799517 -70473134 + B1_Mm SINE Alu 2 147 0 5 774 1109 124 0 0 chr17 24799676 24799845 -70472806 + B2_Mm2 SINE B2 1 169 -26 5 774 681 76 0 0 chr17 24799850 24799942 -70472709 + (GAA)n Simple_repeat Simple_repeat 2 93 0 5 774 439 312 0 101 chr17 24800021 24800160 -70472491 - RSINE1 SINE B4 -30 135 11 5 774 370 233 117 0 chr17 24800192 24800295 -70472356 - PB1D10 SINE Alu 0 117 3 6 774 252 266 12 60 chr17 24800533 24800617 -70472034 - ID4_ SINE ID -1 82 3 6 774 302 361 0 49 chr17 24800675 24800777 -70471874 - RSINE1 SINE B4 0 165 69 6 774 1164 181 39 5 chr17 24800848 24801054 -70471597 - B3 SINE B2 0 216 4 6 774 251 250 231 39 chr17 24801124 24801228 -70471423 - B3 SINE B2 -28 188 65 6 774 333 288 91 34 chr17 24801191 24801367 -70471284 - B4 SINE B4 0 292 107 6 774 607 183 75 0 chr17 24801574 24801694 -70470957 + B1_Mur2 SINE Alu 14 142 -7 6 774 250 292 71 55 chr17 24801581 24801708 -70470943 - YREP_Mm Unknown Unknown -1516 296 168 6 774 888 249 24 5 chr17 24801740 24801950 -70470701 + B3 SINE B2 3 216 0 6 774 1159 69 7 0 chr17 24802014 24802159 -70470492 - B1_Mm SINE Alu 0 147 2 6 774 546 0 26 13 chr17 24802353 24802429 -70470222 + B1_Mur4 SINE Alu 74 150 0 6 774 479 149 0 87 chr17 24802543 24802646 -70470005 + B1_Mur4 SINE Alu 43 136 -14 6 774 194 0 39 0 chr17 24802646 24802672 -70469979 + (CAAA)n Simple_repeat Simple_repeat 4 30 0 6 774 234 0 0 0 chr17 24802675 24802701 -70469950 + (GA)n Simple_repeat Simple_repeat 1 26 0 6 774 1248 32 26 0 chr17 24802877 24803031 -70469620 + LSU-rRNA_Hsa rRNA rRNA 3667 3824 -1211 6 774 432 228 0 109 chr17 24803031 24803169 -70469482 + MT2B LTR ERVL 142 264 -337 6 774 447 243 62 86 chr17 24803045 24803069 -70469582 + B4 SINE B4 70 224 -65 6 774 1038 52 0 0 chr17 24803069 24803204 -70469447 + B1_Mm SINE Alu 13 147 0 6 774 790 127 108 48 chr17 24803207 24803373 -70469278 - B2_Mm2 SINE B2 -19 176 1 6 774 460 144 77 11 chr17 24803374 24803465 -70469186 - ORR1C2 LTR MaLR -57 327 231 6 774 955 116 7 52 chr17 24803522 24803676 -70468975 - B1_Mus1 SINE Alu 0 148 2 6 774 269 100 0 20 chr17 24803757 24803808 -70468843 + (TTTG)n Simple_repeat Simple_repeat 2 51 0 6 774 572 122 0 45 chr17 24803911 24804023 -70468628 - B1_Mur4 SINE Alu 0 150 44 6 774 1150 29 0 42 chr17 24804234 24804378 -70468273 + B1_Mm SINE Alu 1 138 -9 6 774 1154 68 0 26 chr17 24804680 24804832 -70467819 + B1_Mus1 SINE Alu 1 148 0 6 774 983 181 114 0 chr17 24805174 24805367 -70467284 - B3 SINE B2 0 216 2 6 774 598 163 120 30 chr17 24805382 24805515 -70467136 - B1_Mur1 SINE Alu 0 149 5 6 774 290 183 150 0 chr17 24806111 24806171 -70466480 - ID4 SINE ID -10 73 5 6 774 1224 41 7 0 chr17 24806261 24806406 -70466245 + B1_Mus2 SINE Alu 1 146 -1 6 774 261 209 35 11 chr17 24806697 24806784 -70465867 + (CGG)n Simple_repeat Simple_repeat 1 89 0 6 774 192 77 0 0 chr17 24807752 24807778 -70464873 + (T)n Simple_repeat Simple_repeat 1 26 0 6 774 540 155 244 25 chr17 24807785 24807904 -70464747 - B1_Mur1 SINE Alu 0 149 5 6 774 615 149 65 0 chr17 24807908 24808034 -70464617 - B1_Mur4 SINE Alu -9 141 2 6 774 584 143 180 16 chr17 24808812 24808940 -70463711 + B1_Mur4 SINE Alu 1 149 -1 6 774 459 187 33 0 chr17 24809394 24809485 -70463166 - PB1D9 SINE Alu 0 120 27 6 774 252 77 0 0 chr17 24809639 24809678 -70462973 + (CTTG)n Simple_repeat Simple_repeat 1 39 0 6 774 633 202 0 8 chr17 24809678 24809798 -70462853 - B1_Mur4 SINE Alu -13 137 19 6 774 606 235 12 89 chr17 24809801 24809985 -70462666 - B3 SINE B2 -17 178 1 6 774 907 26 0 98 chr17 24810721 24810883 -70461768 - B1_Mm SINE Alu 0 148 2 6 774 943 92 35 7 chr17 24811934 24812077 -70460574 + B1_Mm SINE Alu 1 147 0 6 774 437 195 73 0 chr17 24812083 24812165 -70460486 - B1_Mur3 SINE Alu -13 136 49 6 774 620 98 19 38 chr17 24812178 24812191 -70460460 - B1_Mus2 SINE Alu -1 146 137 6 774 238 0 53 26 chr17 24812191 24812229 -70460422 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6 774 620 98 19 38 chr17 24812229 24812321 -70460330 - B1_Mus2 SINE Alu -11 136 43 6 774 268 145 8 179 chr17 24812261 24812352 -70460299 - RLTR25B LTR ERVK -531 572 435 6 774 195 42 0 0 chr17 24817600 24817624 -70455027 + (CCCCCA)n Simple_repeat Simple_repeat 4 27 0 6 774 246 32 0 0 chr17 24817706 24817737 -70454914 + (CCA)n Simple_repeat Simple_repeat 3 33 0 6 774 596 296 20 0 chr17 24819206 24819358 -70453293 + RSINE1 SINE B4 1 155 -10 6 774 1151 69 0 20 chr17 24819407 24819554 -70453097 - B1_Mus1 SINE Alu 0 148 5 6 774 390 262 81 36 chr17 24819559 24819651 -70453000 - B1_Mm SINE Alu -30 117 19 6 774 1139 112 100 0 chr17 24819651 24819821 -70452830 + B2_Mm2 SINE B2 4 190 -5 6 774 390 262 81 36 chr17 24819821 24819839 -70452812 - B1_Mm SINE Alu -129 18 2 6 774 28 0 0 0 chr17 24819852 24819880 -70452771 + AT_rich Low_complexity Low_complexity 1 28 0 6 774 287 77 0 0 chr17 24819992 24820031 -70452620 - B3 SINE B2 -101 115 77 6 774 1149 52 0 0 chr17 24820035 24820169 -70452482 + B1_Mus1 SINE Alu 2 135 -13 6 774 183 42 0 0 chr17 24820169 24820193 -70452458 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 6 774 388 269 37 37 chr17 24820198 24820306 -70452345 - B3 SINE B2 -6 210 103 6 774 1385 86 37 0 chr17 24820314 24820501 -70452150 - B2_Mm2 SINE B2 0 195 2 6 774 192 125 0 0 chr17 24820523 24820555 -70452096 + (T)n Simple_repeat Simple_repeat 1 32 0 6 774 696 130 146 0 chr17 24820558 24820681 -70451970 - B1_Mus1 SINE Alu 0 148 8 6 774 402 21 0 0 chr17 24820688 24820735 -70451916 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 774 295 240 200 0 chr17 24820895 24820970 -70451681 - 5S rRNA rRNA -31 90 1 6 774 1172 88 0 0 chr17 24821040 24821188 -70451463 - B1_Mus1 SINE Alu 0 148 1 6 774 316 317 33 30 chr17 24821195 24821395 -70451256 + L1MD2 LINE L1 659 906 -5641 6 774 959 86 23 0 chr17 24821420 24821548 -70451103 + B1_Mus1 SINE Alu 1 131 -17 6 774 719 83 194 62 chr17 24821565 24821679 -70450972 + B1_Mus2 SINE Alu 1 139 -8 6 774 495 0 0 0 chr17 24821679 24821734 -70450917 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 774 719 83 194 62 chr17 24821734 24821748 -70450903 + B1_Mus2 SINE Alu 140 146 -1 6 774 1152 75 0 7 chr17 24823803 24823815 -70448836 - B1_Mus2 SINE Alu 0 147 136 6 774 1254 45 0 0 chr17 24823815 24823972 -70448679 + (TTTC)n Simple_repeat Simple_repeat 2 158 0 6 774 1152 75 0 7 chr17 24823972 24824107 -70448544 - B1_Mus2 SINE Alu -12 135 1 6 774 1170 56 14 0 chr17 24824871 24825015 -70447636 + B1_Mus1 SINE Alu 2 147 -1 6 774 295 208 49 49 chr17 24825048 24825129 -70447522 + ID_B1 SINE B4 88 168 -56 6 774 302 169 281 10 chr17 24825145 24825241 -70447410 + B3 SINE B2 2 123 -93 6 774 281 295 9 9 chr17 24826532 24826645 -70446006 + G-rich Low_complexity Low_complexity 2 114 0 6 774 21 0 0 0 chr17 24826899 24826920 -70445731 + GC_rich Low_complexity Low_complexity 1 21 0 6 774 244 298 192 21 chr17 24827987 24828068 -70444583 + L2 LINE L2 1731 1835 -1584 6 774 248 253 60 96 chr17 24828068 24828151 -70444500 + ID4_ SINE ID 2 81 -2 6 774 244 298 192 21 chr17 24828151 24828309 -70444342 + L2 LINE L2 1836 2010 -1409 6 774 189 0 0 0 chr17 24828462 24828483 -70444168 + (T)n Simple_repeat Simple_repeat 1 21 0 6 774 1023 116 0 33 chr17 24828483 24828635 -70444016 - B1_Mus2 SINE Alu 0 147 1 6 774 386 136 0 0 chr17 24828664 24828723 -70443928 + B1_Mus1 SINE Alu 2 60 -88 6 774 1225 48 0 0 chr17 24828798 24828945 -70443706 - B1_Mus2 SINE Alu 0 147 1 6 774 619 190 76 55 chr17 24828946 24829091 -70443560 - B1_Mur1 SINE Alu -1 148 1 6 774 677 139 0 44 chr17 24829127 24829262 -70443389 + B1_Mur4 SINE Alu 6 134 -16 6 774 487 215 178 20 chr17 24829294 24829446 -70443205 - B3 SINE B2 -16 200 25 6 774 820 37 0 0 chr17 24831679 24831787 -70440864 - B1_Mus2 SINE Alu 0 147 40 6 774 1149 75 0 0 chr17 24831996 24832143 -70440508 - B1_Mus1 SINE Alu 0 148 2 6 774 222 290 0 16 chr17 24832459 24832522 -70440129 + ID4 SINE ID 15 76 -7 6 774 210 37 0 0 chr17 24832522 24832549 -70440102 + (TAA)n Simple_repeat Simple_repeat 1 27 0 6 774 313 299 12 18 chr17 24833090 24833257 -70439394 + G-rich Low_complexity Low_complexity 6 171 0 6 774 498 252 0 75 chr17 24833717 24833863 -70438788 - ID_B1 SINE B4 0 224 90 6 774 216 325 38 0 chr17 24833896 24833976 -70438675 - L2a LINE L2 0 3426 3344 6 774 189 0 0 0 chr17 24834287 24834308 -70438343 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 774 786 129 7 43 chr17 24834309 24834447 -70438204 - B1_Mus1 SINE Alu -8 140 8 6 774 445 276 17 89 chr17 24834447 24834488 -70438163 - ID_B1 SINE B4 -8 216 51 6 774 185 83 28 0 chr17 24834792 24834828 -70437823 + (CAAAC)n Simple_repeat Simple_repeat 3 39 0 6 774 1203 54 0 0 chr17 24839594 24839741 -70432910 + B1_Mm SINE Alu 1 147 0 6 774 1492 39 50 0 chr17 24840336 24840517 -70432134 - B2_Mm1a SINE B2 -1 192 3 6 774 203 167 28 0 chr17 24840562 24840598 -70432053 + C-rich Low_complexity Low_complexity 3 39 0 6 774 198 103 0 0 chr17 24840603 24840632 -70432019 + (T)n Simple_repeat Simple_repeat 1 29 0 6 774 1226 54 0 13 chr17 24840634 24840784 -70431867 - B1_Mus1 SINE Alu 0 148 1 6 774 688 153 16 48 chr17 24840785 24840909 -70431742 - PB1D9 SINE Alu 0 120 1 6 774 189 107 0 0 chr17 24841877 24841905 -70430746 + (TTTC)n Simple_repeat Simple_repeat 3 30 0 6 774 1227 74 0 0 chr17 24841905 24842053 -70430598 - B1_Mus1 SINE Alu 0 148 1 6 774 1182 48 0 20 chr17 24843823 24843972 -70428679 - B1_Mus2 SINE Alu -1 146 1 7 774 278 138 46 0 chr17 24844748 24844813 -70427838 + CT-rich Low_complexity Low_complexity 3 70 0 7 774 833 50 193 0 chr17 24844884 24844997 -70427654 + B1_Mm SINE Alu 2 137 -10 7 774 266 0 0 29 chr17 24844997 24845032 -70427619 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 774 202 209 23 0 chr17 24845137 24845180 -70427471 + CT-rich Low_complexity Low_complexity 1 44 0 7 774 362 206 231 9 chr17 24845180 24845288 -70427363 - B1_Mur3 SINE Alu 0 149 18 7 774 1287 27 0 0 chr17 24845328 24845475 -70427176 + B1_Mm SINE Alu 1 147 0 7 774 42 0 0 0 chr17 24845475 24845517 -70427134 + AT_rich Low_complexity Low_complexity 1 42 0 7 774 924 180 70 0 chr17 24845520 24845692 -70426959 + B2_Mm2 SINE B2 2 185 -10 7 774 834 191 56 6 chr17 24845702 24845881 -70426770 + B2_Mm2 SINE B2 3 190 -5 7 774 603 233 17 0 chr17 24845881 24846001 -70426650 + B1_Mus2 SINE Alu 25 146 -1 7 774 255 284 48 95 chr17 24846004 24846109 -70426542 - B1F SINE Alu -10 139 40 7 774 441 0 0 0 chr17 24846132 24846181 -70426470 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 774 426 252 130 0 chr17 24846217 24846332 -70426319 - RSINE1 SINE B4 -25 140 11 7 774 222 37 0 0 chr17 24846353 24846380 -70426271 + (TG)n Simple_repeat Simple_repeat 2 28 0 7 774 725 57 86 0 chr17 24846417 24846522 -70426129 - B1_Mus1 SINE Alu 0 148 35 7 774 291 147 101 14 chr17 24846466 24846535 -70426116 - 4.5SRNA scRNA scRNA -8 86 12 7 774 540 205 34 8 chr17 24846538 24846656 -70425995 - B1_Mur4 SINE Alu -25 125 5 7 774 298 244 73 96 chr17 24846547 24846683 -70425968 - MT2B LTR ERVL -336 265 133 7 774 676 262 14 0 chr17 24846705 24846846 -70425805 + B1_Mur1 SINE Alu 3 145 -4 7 774 1105 66 7 0 chr17 24847402 24847538 -70425113 + B1_Mus1 SINE Alu 2 138 -10 7 774 183 42 0 0 chr17 24847538 24847562 -70425089 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 7 774 225 159 0 0 chr17 24847580 24847624 -70425027 + A-rich Low_complexity Low_complexity 1 44 0 7 774 782 169 0 21 chr17 24847666 24847811 -70424840 + B1_Mus1 SINE Alu 7 148 0 7 774 1376 62 28 0 chr17 24848004 24848183 -70424468 - B2_Mm2 SINE B2 -10 185 2 7 774 252 0 0 0 chr17 24848209 24848237 -70424414 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 7 774 316 111 0 36 chr17 24848261 24848317 -70424334 - B2_Mm2 SINE B2 -94 101 48 7 774 1086 175 11 0 chr17 24848365 24848542 -70424109 - B2_Mm1t SINE B2 -14 179 1 7 774 454 224 208 10 chr17 24848587 24848821 -70423830 + MT2A LTR ERVL 253 540 -61 7 774 478 98 24 0 chr17 24848822 24848904 -70423747 + (TA)n Simple_repeat Simple_repeat 2 85 0 7 774 755 249 64 10 chr17 24849031 24849234 -70423417 + B3 SINE B2 3 216 0 7 774 387 0 0 0 chr17 24849272 24849315 -70423336 + (TC)n Simple_repeat Simple_repeat 2 44 0 7 774 1188 69 0 0 chr17 24849315 24849460 -70423191 - B1_Mus2 SINE Alu -1 146 2 7 774 334 203 54 0 chr17 24849488 24849562 -70423089 - B3 SINE B2 -111 105 28 7 774 252 86 0 0 chr17 24849784 24849819 -70422832 + (CGTG)n Simple_repeat Simple_repeat 1 35 0 7 774 574 191 27 18 chr17 24850042 24850154 -70422497 - B1_Mus2 SINE Alu 0 147 35 7 774 1203 115 20 25 chr17 24850175 24850371 -70422280 - B2_Mm2 SINE B2 0 195 1 7 774 387 212 38 0 chr17 24850536 24850616 -70422035 - MurERV4-int LTR ERVK -1348 3912 3830 7 774 3693 148 40 47 chr17 24850616 24851086 -70421565 + MurERV4-int LTR ERVK 3922 4402 -858 7 774 1102 97 21 0 chr17 24851086 24851231 -70421420 + B1_Mus1 SINE Alu 1 148 0 7 774 3693 148 40 47 chr17 24851231 24851491 -70421160 + MurERV4-int LTR ERVK 4403 4647 -613 7 774 1106 81 0 26 chr17 24851523 24851675 -70420976 + B1_Mus1 SINE Alu 1 148 0 7 774 1109 146 32 0 chr17 24851690 24851875 -70420776 + MurERV4-int LTR ERVK 4639 4829 -431 7 774 1530 42 26 5 chr17 24851883 24852073 -70420578 + B2_Mm2 SINE B2 2 195 0 7 774 217 319 14 14 chr17 24852087 24852160 -70420491 - L2a LINE L2 -18 3408 3336 7 774 620 250 27 43 chr17 24852168 24852352 -70420299 - B3 SINE B2 -25 191 11 7 774 680 191 96 0 chr17 24852356 24852492 -70420159 - B1_Mur2 SINE Alu 0 149 1 7 774 706 84 234 40 chr17 24855294 24855418 -70417233 + B1_Mus1 SINE Alu 1 148 0 7 774 710 163 76 23 chr17 24855662 24855794 -70416857 + B1_Mur4 SINE Alu 1 139 -11 7 774 1005 85 33 0 chr17 24856031 24856184 -70416467 + B2_Mm1t SINE B2 14 171 -22 7 774 374 104 0 5 chr17 24856201 24856266 -70416385 + B2_Mm2 SINE B2 47 109 -107 7 774 1220 55 0 0 chr17 24856304 24856450 -70416201 + B1_Mus2 SINE Alu 2 147 0 7 774 850 106 112 15 chr17 24858322 24858456 -70414195 - B1_Mus2 SINE Alu 0 147 1 7 774 1032 65 50 0 chr17 24859814 24859953 -70412698 + B1_Mus2 SINE Alu 2 147 0 7 774 193 127 0 52 chr17 24859953 24860011 -70412640 + A-rich Low_complexity Low_complexity 4 58 0 7 774 516 163 51 0 chr17 24860685 24860783 -70411868 - B1_Mus1 SINE Alu -43 105 3 7 774 360 121 17 0 chr17 24862092 24862150 -70410501 + B1_Mus1 SINE Alu 16 74 -74 7 774 340 304 78 35 chr17 24862196 24862287 -70410364 + PB1 SINE Alu 5 104 -23 7 774 313 316 31 0 chr17 24862287 24862385 -70410266 + PB1D7 SINE Alu 1 101 -19 7 774 1124 15 8 0 chr17 24862385 24862519 -70410132 + (TTTC)n Simple_repeat Simple_repeat 1 135 0 7 774 926 121 0 0 chr17 24862519 24862651 -70410000 - B1_Mus2 SINE Alu -15 132 1 7 774 340 304 78 35 chr17 24862651 24862673 -70409978 + PB1 SINE Alu 105 123 -4 7 774 1088 206 54 0 chr17 24862678 24862882 -70409769 + B3 SINE B2 2 216 0 7 774 1473 56 28 0 chr17 24862931 24863110 -70409541 - B2_Mm2 SINE B2 -10 185 2 7 774 616 126 139 25 chr17 24863110 24863232 -70409419 + B1_Mur4 SINE Alu 14 149 -1 7 774 1044 208 61 172 chr17 24863245 24863588 -70409063 - MTD LTR MaLR -103 316 12 7 774 192 111 0 0 chr17 24863590 24863626 -70409025 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 7 774 977 249 4 39 chr17 24863677 24863907 -70408744 - ID_B1 SINE B4 -1 223 2 7 774 522 0 0 0 chr17 24863917 24863975 -70408676 + (TC)n Simple_repeat Simple_repeat 2 59 0 7 774 578 139 269 0 chr17 24863976 24864084 -70408567 - B1_Mur4 SINE Alu -13 137 1 7 774 414 231 128 0 chr17 24864085 24864202 -70408449 + MTD LTR MaLR 258 389 -30 7 774 1035 186 65 5 chr17 24864223 24864423 -70408228 - B3 SINE B2 0 216 5 7 774 378 191 124 0 chr17 24865757 24865851 -70406800 + PB1 SINE Alu 14 124 -3 7 774 979 99 7 47 chr17 24865863 24865997 -70406654 + B1_Mus2 SINE Alu 5 135 -12 7 774 243 0 0 0 chr17 24865997 24866024 -70406627 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 774 979 99 7 47 chr17 24866024 24866038 -70406613 + B1_Mus2 SINE Alu 136 147 0 7 774 262 322 12 0 chr17 24866042 24866141 -70406510 + ID4_ SINE ID 5 104 -48 7 774 321 242 162 0 chr17 24866182 24866281 -70406370 - B1_Mus2 SINE Alu -33 116 2 7 774 275 165 150 12 chr17 24866282 24866362 -70406289 - PB1D10 SINE Alu -1 116 26 7 774 1232 61 0 0 chr17 24866395 24866543 -70406108 + B1_Mus1 SINE Alu 1 148 0 7 774 955 222 151 8 chr17 24866561 24866820 -70405831 - RMER15 LTR ERVL -140 435 140 7 774 270 28 0 0 chr17 24866831 24866867 -70405784 - B2_Mm2 SINE B2 -158 37 2 7 774 345 292 53 23 chr17 24866864 24866881 -70405770 + ID SINE ID 67 87 -137 7 774 692 143 84 0 chr17 24866881 24867000 -70405651 + B1_Mur3 SINE Alu 1 129 -20 7 774 1190 68 0 20 chr17 24867002 24867153 -70405498 - B1_Mus1 SINE Alu 0 148 1 7 774 302 279 124 28 chr17 24867215 24867392 -70405259 - L1MEg LINE L1 -5015 1069 876 7 774 647 246 0 28 chr17 24867421 24867563 -70405088 + ID_B1 SINE B4 86 223 -1 7 774 388 222 144 91 chr17 24868072 24868280 -70404371 + MT2B LTR ERVL 39 257 -344 7 774 1021 51 0 21 chr17 24868187 24868327 -70404324 + B1_Mus2 SINE Alu 10 146 -1 7 774 350 271 93 9 chr17 24868335 24868443 -70404208 + RSINE1 SINE B4 48 164 -1 7 774 234 269 179 0 chr17 24868984 24869062 -70403589 + PB1D10 SINE Alu 18 109 -8 7 774 211 222 0 22 chr17 24869083 24869129 -70403522 + GA-rich Low_complexity Low_complexity 4 48 0 7 774 288 340 31 0 chr17 24869897 24869994 -70402657 + L2b LINE L2 3267 3366 -9 7 774 1111 83 7 0 chr17 24871310 24871455 -70401196 + B1_Mus2 SINE Alu 2 147 0 7 774 467 246 44 80 chr17 24871482 24871558 -70401093 - ID_B1 SINE B4 -15 209 144 7 774 794 129 73 136 chr17 24871558 24871764 -70400887 - B2_Mm2 SINE B2 -2 193 1 7 774 467 246 44 80 chr17 24871764 24871824 -70400827 - ID_B1 SINE B4 -81 143 78 7 774 670 168 16 16 chr17 24871825 24871952 -70400699 - B1_Mm SINE Alu -20 127 1 7 774 528 262 30 85 chr17 24871952 24872027 -70400624 - ID SINE ID -146 78 15 7 774 362 286 31 0 chr17 24872034 24872132 -70400519 - PB1D7 SINE Alu -18 102 2 7 774 243 328 7 96 chr17 24872132 24872168 -70400483 - MT2B LTR ERVL -345 255 134 7 774 583 229 41 48 chr17 24875007 24875129 -70397522 + B1F SINE Alu 3 129 -20 7 774 1237 246 98 100 chr17 24875129 24875406 -70397245 - MTD LTR MaLR 0 419 112 7 774 866 166 29 0 chr17 24875406 24875545 -70397106 + B1_Mus1 SINE Alu 5 147 -1 7 774 1421 80 32 0 chr17 24875548 24875736 -70396915 + B2_Mm2 SINE B2 2 195 0 7 774 1237 246 98 100 chr17 24875736 24875874 -70396777 - MTD LTR MaLR -308 111 1 7 774 583 229 41 48 chr17 24875874 24875898 -70396753 + B1F SINE Alu 130 148 -1 7 774 689 232 102 54 chr17 24875927 24876132 -70396519 + B3 SINE B2 1 215 -1 8 774 787 174 14 0 chr17 24876735 24876873 -70395778 - B1_Mus2 SINE Alu 0 147 8 8 774 1653 31 0 20 chr17 24877518 24877715 -70394936 + B2_Mm1a SINE B2 1 193 0 8 774 715 198 83 6 chr17 24878051 24878219 -70394432 - B3 SINE B2 0 216 36 8 774 576 265 26 19 chr17 24878271 24878425 -70394226 - RSINE1 SINE B4 -2 163 9 8 774 815 71 0 0 chr17 24878476 24878589 -70394062 - B1_Mus2 SINE Alu 0 147 35 8 774 390 204 19 48 chr17 24878511 24878614 -70394037 - MT2B LTR ERVL -337 264 165 8 774 374 186 14 0 chr17 24878590 24878660 -70393991 - PB1D9 SINE Alu -17 103 33 8 774 442 226 113 0 chr17 24878668 24878801 -70393850 - B1F SINE Alu 0 149 2 8 774 2495 181 45 14 chr17 24880116 24880585 -70392066 - RLTR11A2 LTR ERVK 0 527 43 8 774 522 0 0 0 chr17 24880585 24880643 -70392008 + (TG)n Simple_repeat Simple_repeat 2 59 0 8 774 2495 181 45 14 chr17 24880643 24880684 -70391967 - RLTR11A2 LTR ERVK -485 42 2 8 774 231 0 77 0 chr17 24881268 24881307 -70391344 + (CAA)n Simple_repeat Simple_repeat 2 43 0 8 774 941 99 56 14 chr17 24881315 24881459 -70391192 + B1_Mur4 SINE Alu 1 150 0 8 774 468 299 106 71 chr17 24881849 24882266 -70390385 + RLTR11A2 LTR ERVK 3 434 -93 8 774 519 17 0 0 chr17 24882266 24882326 -70390325 + (CATA)n Simple_repeat Simple_repeat 1 60 0 8 774 33 43 0 0 chr17 24882336 24882383 -70390268 + AT_rich Low_complexity Low_complexity 1 47 0 8 774 680 191 65 14 chr17 24883162 24883300 -70389351 + B1F2 SINE Alu 2 146 -3 8 774 342 0 0 0 chr17 24884858 24884896 -70387755 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 8 774 866 243 66 9 chr17 24884898 24885110 -70387541 - ID_B1 SINE B4 0 224 1 8 774 737 235 33 20 chr17 24885493 24885645 -70387006 + RSINE1 SINE B4 4 157 -8 8 774 823 175 28 0 chr17 24885721 24885864 -70386787 - B1_Mus1 SINE Alu 0 148 2 8 774 610 244 117 12 chr17 24885900 24886062 -70386589 + B3A SINE B2 2 180 -18 8 774 376 261 87 0 chr17 24886134 24886272 -70386379 + L1MB5 LINE L1 5587 5736 -442 8 774 3000 212 40 104 chr17 24886288 24886580 -70386071 + RMER13A LTR ERVK 15 304 -556 8 774 1432 57 0 6 chr17 24886580 24886740 -70385911 + B2_Mm1t SINE B2 1 160 -33 8 774 210 37 0 0 chr17 24886740 24886767 -70385884 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 8 774 1432 57 0 6 chr17 24886767 24886781 -70385870 + B2_Mm1t SINE B2 161 174 -19 8 774 3000 212 40 104 chr17 24886781 24887324 -70385327 + RMER13A LTR ERVK 305 796 -64 8 774 436 280 97 36 chr17 24887381 24887629 -70385022 + L1MB5 LINE L1 5815 6077 -97 8 774 866 215 15 30 chr17 24887638 24887839 -70384812 + B3 SINE B2 19 216 0 8 774 220 0 56 28 chr17 24889101 24889137 -70383514 + (TGGG)n Simple_repeat Simple_repeat 3 39 0 8 774 405 0 0 0 chr17 24889847 24889892 -70382759 + (CCCCG)n Simple_repeat Simple_repeat 5 49 0 8 774 292 329 0 0 chr17 24890749 24890819 -70381832 - ID4_ SINE ID -1 82 13 8 774 189 301 145 0 chr17 24890972 24891055 -70381596 + L3 LINE CR1 4384 4478 -11 8 774 480 261 17 9 chr17 24892127 24892243 -70380408 - ID_B1 SINE B4 -8 216 100 8 774 264 30 0 0 chr17 24892263 24892296 -70380355 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 8 774 180 0 0 0 chr17 24892297 24892317 -70380334 + (TG)n Simple_repeat Simple_repeat 1 20 0 8 774 522 0 0 0 chr17 24892317 24892375 -70380276 + (GA)n Simple_repeat Simple_repeat 1 58 0 8 774 415 300 41 8 chr17 24892396 24892517 -70380134 - RSINE1 SINE B4 -38 127 3 8 774 417 280 137 73 chr17 24892529 24892733 -70379918 - ID_B1 SINE B4 -7 217 1 8 774 183 261 83 42 chr17 24893251 24893323 -70379328 + L2 LINE L2 2965 3039 -380 8 774 619 12 25 0 chr17 24893602 24893682 -70378969 + (TC)n Simple_repeat Simple_repeat 1 82 0 8 774 277 274 0 0 chr17 24893691 24893742 -70378909 - B1F1 SINE Alu -96 53 3 8 774 225 255 36 161 chr17 24893941 24894109 -70378542 + MTD LTR MaLR 170 316 -103 8 774 3728 14 0 0 chr17 24896926 24897369 -70375282 - MMETn-int LTR ERVK -3345 1499 1057 8 774 805 118 14 82 chr17 24897564 24897711 -70374940 - B1_Mm SINE Alu 0 147 11 8 774 190 290 70 37 chr17 24897788 24897932 -70374719 + L2b LINE L2 2928 3080 -307 8 774 957 129 0 0 chr17 24899982 24900121 -70372530 - B1_Mus2 SINE Alu 0 147 9 8 774 472 265 37 22 chr17 24900127 24900217 -70372434 + MTE2a LTR MaLR 1 94 -285 8 774 1395 162 0 39 chr17 24900217 24900448 -70372203 + URR1B DNA MER1_type 3 224 -1 8 774 472 290 42 47 chr17 24900448 24900517 -70372134 + MTE2a LTR MaLR 86 154 -225 8 774 817 196 0 13 chr17 24900517 24900667 -70371984 - B1_Mur3 SINE Alu 0 149 2 8 774 314 333 52 91 chr17 24900667 24900737 -70371914 + MTE2a LTR MaLR 155 222 -157 8 774 857 147 132 24 chr17 24900780 24900947 -70371704 - B2_Mm2 SINE B2 -9 186 2 8 774 442 233 9 19 chr17 24901100 24901205 -70371446 + ID_B1 SINE B4 121 224 0 8 774 584 260 11 60 chr17 24902773 24902957 -70369694 - HAL1-2a_MD LINE L1 -505 2519 2345 8 96 710 320 54 13 chr17 24903495 24903793 -70368858 + MLT1E1A LTR MaLR 371 680 0 8 775 441 0 0 0 chr17 24904091 24904140 -70368511 + (CA)n Simple_repeat Simple_repeat 1 49 0 8 775 238 256 44 99 chr17 24904451 24904490 -70368161 - ID_B1 SINE B4 -110 114 29 8 775 250 231 0 0 chr17 24904490 24904542 -70368109 - ID4_ SINE ID -4 79 28 8 775 1670 221 56 19 chr17 24904554 24904927 -70367724 - MTD LTR MaLR -28 391 5 8 775 182 306 60 51 chr17 24905095 24905212 -70367439 - L2 LINE L2 -968 2451 2334 8 775 267 241 228 18 chr17 24905460 24905574 -70367077 - MER20 DNA MER1_type -53 166 29 8 775 552 106 0 0 chr17 24906405 24906490 -70366161 + (TC)n Simple_repeat Simple_repeat 1 85 0 8 775 5105 141 19 73 chr17 24906900 24907441 -70365210 - L1_Mur2 LINE L1 -636 5241 4741 8 775 1222 68 0 0 chr17 24907441 24907588 -70365063 - B1_Mm SINE Alu 0 147 1 8 775 5105 141 19 73 chr17 24907588 24908104 -70364547 - L1_Mur2 LINE L1 -1137 4740 4241 8 775 6008 127 53 11 chr17 24908101 24909436 -70363215 + Lx LINE L1 5258 6648 -6 8 775 405 0 0 0 chr17 24909479 24909524 -70363127 + (TC)n Simple_repeat Simple_repeat 1 45 0 8 775 216 0 0 0 chr17 24909524 24909547 -70363104 + (CA)n Simple_repeat Simple_repeat 1 24 0 8 775 391 272 11 0 chr17 24909547 24909639 -70363012 - RSINE1 SINE B4 -49 116 24 8 775 841 215 99 43 chr17 24909645 24909878 -70362773 - B4A SINE B4 -46 246 1 8 775 686 290 10 52 chr17 24910311 24910504 -70362147 - B3A SINE B2 -5 193 9 8 775 182 45 21 64 chr17 24910517 24910564 -70362087 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 775 530 171 78 85 chr17 24910564 24910705 -70361946 + B1_Mur1 SINE Alu 9 148 -1 8 775 210 71 0 0 chr17 24910719 24910747 -70361904 + (TTCC)n Simple_repeat Simple_repeat 2 29 0 8 775 236 30 30 0 chr17 24910757 24910790 -70361861 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 8 775 1035 81 0 35 chr17 24910797 24910938 -70361713 - B1_Mus2 SINE Alu -11 136 1 8 775 209 185 37 0 chr17 24911388 24911442 -70361209 + CT-rich Low_complexity Low_complexity 1 56 0 8 775 229 316 25 25 chr17 24911442 24911523 -70361128 - ID2 SINE ID 0 83 3 8 775 297 299 78 35 chr17 24911533 24911675 -70360976 - B1F1 SINE Alu -1 148 1 8 775 229 312 98 103 chr17 24912569 24912620 -70360031 - B3 SINE B2 -2 214 2 8 775 558 261 37 37 chr17 24912620 24912783 -70359868 - RSINE1 SINE B4 0 165 3 8 775 1005 156 200 0 chr17 24913079 24913259 -70359392 - B3 SINE B2 0 216 1 8 775 240 35 0 0 chr17 24913262 24913291 -70359360 + (TTA)n Simple_repeat Simple_repeat 2 30 0 8 775 536 96 48 0 chr17 24913291 24913374 -70359277 - B1_Mur3 SINE Alu -10 139 53 8 775 481 304 108 0 chr17 24913427 24913575 -70359076 + RSINE1 SINE B4 2 165 0 8 775 586 184 6 6 chr17 24913575 24913745 -70358906 + (CA)n Simple_repeat Simple_repeat 1 170 0 8 775 543 239 37 0 chr17 24913763 24913872 -70358779 - PB1D7 SINE Alu -7 113 1 8 775 497 204 91 10 chr17 24913900 24913999 -70358652 - PB1D10 SINE Alu -10 107 1 8 775 305 244 109 39 chr17 24914103 24914231 -70358420 - MER5B DNA MER1_type -33 145 9 8 775 1319 103 11 0 chr17 24914475 24914660 -70357991 - B2_Mm1t SINE B2 -5 188 2 8 775 374 232 61 0 chr17 24914794 24914876 -70357775 + ID_B1 SINE B4 81 167 -57 8 775 840 158 8 8 chr17 24914986 24915120 -70357531 - B1_Mur2 SINE Alu -13 136 3 8 775 593 261 0 0 chr17 24915146 24915265 -70357386 - PB1D7 SINE Alu -1 119 1 8 775 204 40 0 0 chr17 24915272 24915297 -70357354 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 8 775 267 233 82 16 chr17 24915297 24915358 -70357293 - ID_B1 SINE B4 -14 210 146 8 775 351 0 0 0 chr17 24915364 24915403 -70357248 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 8 775 1072 77 7 7 chr17 24915403 24915539 -70357112 - B1_Mus1 SINE Alu -11 137 1 8 775 446 265 50 35 chr17 24915546 24915687 -70356964 - B1F SINE Alu -6 143 1 8 775 406 237 7 109 chr17 24916283 24916430 -70356221 - Lx6 LINE L1 -651 6809 6678 8 775 1068 156 150 9 chr17 24916430 24916643 -70356008 + MTC LTR MaLR 161 403 -18 8 775 633 255 7 0 chr17 24916911 24917052 -70355599 + ID_B1 SINE B4 81 222 -2 8 775 989 235 15 0 chr17 24917088 24917288 -70355363 + B3 SINE B2 5 207 -9 8 775 3215 34 3 13 chr17 24917470 24917858 -70354793 - L1Md_F2 LINE L1 0 6582 6199 8 775 390 21 0 0 chr17 24918000 24918047 -70354604 + (CCAA)n Simple_repeat Simple_repeat 1 47 0 8 775 341 221 52 0 chr17 24918077 24918154 -70354497 - ID4_ SINE ID -2 81 1 9 775 870 103 0 0 chr17 24918176 24918292 -70354359 - B1_Mus2 SINE Alu -23 124 9 9 775 444 241 61 18 chr17 24918193 24918307 -70354344 - B4 SINE B4 -94 198 80 9 775 709 245 0 0 chr17 24918319 24918466 -70354185 - B1_Mur1 SINE Alu -1 148 2 9 775 509 152 0 186 chr17 24918528 24918657 -70353994 - B1_Mur3 SINE Alu -43 106 2 9 775 333 0 0 0 chr17 24919068 24919105 -70353546 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 9 775 266 158 0 0 chr17 24919200 24919238 -70353413 + B1_Mus1 SINE Alu 2 39 -109 9 775 225 154 0 0 chr17 24919230 24919269 -70353382 + B1_Mus2 SINE Alu 108 146 -1 9 775 228 218 91 118 chr17 24919600 24919787 -70352864 + ZP3AR Satellite Satellite 2 183 -29 9 775 252 159 0 0 chr17 24919750 24919794 -70352857 + B3A SINE B2 1 44 -154 9 775 3537 128 146 22 chr17 24919796 24920474 -70352177 + Lx2 LINE L1 6232 6993 -4 9 775 558 281 68 6 chr17 24920482 24920643 -70352008 + B3 SINE B2 27 197 -19 9 775 469 185 0 69 chr17 24920644 24920731 -70351920 + ID_B1 SINE B4 143 223 -1 9 775 30019 96 32 6 chr17 24920876 24924501 -70348150 + L1_Mus2 LINE L1 675 4441 -1442 9 775 1562 48 5 0 chr17 24924501 24924688 -70347963 + B2_Mm1t SINE B2 2 189 -4 9 775 30019 73 20 13 chr17 24924688 24926839 -70345812 + L1_Mus2 LINE L1 4442 6566 0 9 775 850 175 142 5 chr17 24927035 24927225 -70345426 - B3 SINE B2 0 216 1 9 775 189 263 171 6 chr17 24927225 24927347 -70345304 - L2c LINE L2 -229 3158 3010 9 775 359 217 129 61 chr17 24927436 24927498 -70345153 - MER53 DNA hAT -3 190 125 9 775 826 258 40 67 chr17 24927498 24927722 -70344929 + ID_B1 SINE B4 3 220 -4 9 775 359 217 129 61 chr17 24927722 24927806 -70344845 - MER53 DNA hAT -69 124 34 9 775 198 0 0 0 chr17 24927989 24928011 -70344640 + (A)n Simple_repeat Simple_repeat 1 22 0 9 775 246 222 19 0 chr17 24928014 24928068 -70344583 + ID_B1 SINE B4 169 223 -1 9 775 671 246 24 0 chr17 24928076 24928202 -70344449 - ID_B1 SINE B4 -12 212 84 9 775 267 103 0 0 chr17 24928234 24928273 -70344378 + (CCTG)n Simple_repeat Simple_repeat 1 39 0 9 775 651 241 30 54 chr17 24928289 24928456 -70344195 - RSINE1 SINE B4 0 165 3 9 775 22 0 0 0 chr17 24928456 24928478 -70344173 + AT_rich Low_complexity Low_complexity 1 22 0 9 775 383 208 141 30 chr17 24928480 24928579 -70344072 + PB1D9 SINE Alu 11 120 0 9 775 236 288 30 0 chr17 24928920 24928986 -70343665 - B3A SINE B2 -2 196 129 9 775 314 193 17 26 chr17 24929064 24929171 -70343480 + BGLII_A LTR ERVK 229 417 -24 9 775 597 202 0 0 chr17 24929214 24929318 -70343333 + PB1D9 SINE Alu 2 105 -15 9 775 1671 231 67 67 chr17 24929341 24929848 -70342803 - RLTR31_Mur LTR ERVK -36 517 11 9 775 266 122 118 39 chr17 24929937 24929988 -70342663 - B2_Mm2 SINE B2 -94 101 47 9 775 1321 79 23 0 chr17 24930033 24930210 -70342441 - B2_Mm1t SINE B2 -12 181 1 9 775 321 89 0 0 chr17 24930290 24930335 -70342316 + (TCC)n Simple_repeat Simple_repeat 3 47 0 9 775 576 0 0 0 chr17 24930335 24930399 -70342252 + (TC)n Simple_repeat Simple_repeat 1 64 0 9 775 774 162 0 0 chr17 24930401 24930518 -70342133 - B1_Mur2 SINE Alu -31 118 2 9 775 463 180 0 133 chr17 24930405 24930454 -70342197 - MT2B LTR ERVL -337 264 161 9 775 242 269 0 27 chr17 24930454 24930524 -70342127 - ORR1B1-int LTR MaLR -797 712 644 9 775 916 218 69 0 chr17 24930524 24930726 -70341925 - B3 SINE B2 0 216 1 9 775 242 269 0 27 chr17 24930734 24930766 -70341885 - ORR1B1-int LTR MaLR -866 643 605 9 775 1254 41 0 0 chr17 24930769 24930915 -70341736 - B1_Mm SINE Alu -1 146 1 9 775 186 43 0 0 chr17 24931016 24931039 -70341612 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 9 775 732 186 62 0 chr17 24931039 24931168 -70341483 - B1_Mus1 SINE Alu -10 138 2 9 775 575 324 12 0 chr17 24931321 24931494 -70341157 + ID_B1 SINE B4 3 177 -47 9 775 425 230 29 20 chr17 24931505 24931607 -70341044 + ID_B1 SINE B4 91 193 -31 9 775 239 284 69 59 chr17 24932066 24932167 -70340484 + MARNA DNA Mariner 425 526 -60 9 775 189 74 0 0 chr17 24932339 24932366 -70340285 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 9 775 712 163 0 96 chr17 24932366 24932502 -70340149 - B1_Mus2 SINE Alu -10 137 15 9 775 335 221 0 175 chr17 24932400 24932505 -70340146 - MT2B LTR ERVL -343 258 176 9 775 207 0 0 0 chr17 24932505 24932528 -70340123 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 775 1209 48 7 0 chr17 24932531 24932676 -70339975 - B1_Mm SINE Alu 0 147 2 9 775 335 221 0 175 chr17 24932676 24932692 -70339959 - MT2B LTR ERVL -426 175 160 9 775 498 143 0 0 chr17 24932860 24932951 -70339700 + (TG)n Simple_repeat Simple_repeat 1 91 0 9 775 559 253 120 30 chr17 24932957 24933124 -70339527 - B3A SINE B2 -16 182 1 9 775 316 172 0 59 chr17 24933234 24933302 -70339349 + B1_Mm SINE Alu 84 147 0 9 775 1205 36 0 7 chr17 24933713 24933854 -70338797 + B1_Mus2 SINE Alu 1 140 -7 9 775 216 0 0 0 chr17 24933854 24933878 -70338773 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 9 775 506 331 14 0 chr17 24933916 24934058 -70338593 + ID_B1 SINE B4 81 224 0 9 775 250 105 310 17 chr17 24934107 24934165 -70338486 + RMER19B LTR ERVK 309 383 -519 9 775 286 243 43 0 chr17 24934174 24934244 -70338407 + PB1D10 SINE Alu 42 114 -3 9 775 231 264 28 142 chr17 24934598 24934739 -70337912 - MIRm SINE MIR -112 156 32 9 775 635 298 61 22 chr17 24934808 24935038 -70337613 - RMER15 LTR ERVL 0 575 337 9 775 293 140 18 0 chr17 24935129 24935186 -70337465 + G-rich Low_complexity Low_complexity 4 61 0 9 775 262 295 229 17 chr17 24935485 24935613 -70337038 - MIR3 SINE MIR -46 162 16 9 775 1289 78 15 63 chr17 24935670 24935875 -70336776 + B2_Mm2 SINE B2 1 195 0 9 775 751 215 195 23 chr17 24936096 24936164 -70336487 + RLTR28B LTR ERVL 17 90 -391 9 775 3374 35 0 15 chr17 24936164 24936566 -70336085 - MTA_Mm LTR MaLR 0 396 1 9 775 751 215 195 23 chr17 24936566 24936754 -70335897 + RLTR28B LTR ERVL 91 317 -164 9 775 262 189 21 32 chr17 24936756 24936849 -70335802 + (CAAA)n Simple_repeat Simple_repeat 2 93 0 9 775 328 227 153 9 chr17 24937005 24937116 -70335535 - B3 SINE B2 0 216 90 9 775 1111 15 15 0 chr17 24937184 24937321 -70335330 + (CA)n Simple_repeat Simple_repeat 2 140 0 9 775 1126 102 60 43 chr17 24937573 24937758 -70334893 + B2_Mm2 SINE B2 2 189 -6 9 775 650 231 8 0 chr17 24938585 24938706 -70333945 + RSINE1 SINE B4 3 124 -41 9 775 411 73 0 0 chr17 24938709 24938764 -70333887 + (CA)n Simple_repeat Simple_repeat 2 56 0 9 775 223 191 0 0 chr17 24938768 24938810 -70333841 + A-rich Low_complexity Low_complexity 1 42 0 9 775 529 158 39 19 chr17 24938810 24938913 -70333738 + ID_B1 SINE B4 120 224 0 9 775 206 0 69 0 chr17 24938973 24939002 -70333649 + (TATG)n Simple_repeat Simple_repeat 1 31 0 9 775 646 267 12 58 chr17 24939005 24939176 -70333475 - RSINE1 SINE B4 0 165 3 9 775 1268 27 0 7 chr17 24939280 24939427 -70333224 - B1_Mm SINE Alu 0 147 2 9 775 25 31 0 0 chr17 24939431 24939463 -70333188 + AT_rich Low_complexity Low_complexity 1 32 0 9 775 189 0 0 0 chr17 24939510 24939531 -70333120 + (TG)n Simple_repeat Simple_repeat 2 22 0 9 775 973 218 56 0 chr17 24939532 24939711 -70332940 - B3 SINE B2 -23 193 5 9 775 787 176 49 0 chr17 24939737 24939879 -70332772 - B1_Mur1 SINE Alu 0 149 1 9 775 502 117 12 38 chr17 24940183 24940263 -70332388 + B1_Mur4 SINE Alu 60 137 -13 9 775 1039 101 0 0 chr17 24940264 24940403 -70332248 - B1_Mus1 SINE Alu 0 148 10 9 775 686 214 61 0 chr17 24940467 24940598 -70332053 + B1_Mur2 SINE Alu 1 139 -10 9 775 519 189 108 50 chr17 24941811 24941950 -70330701 + B1_Mus2 SINE Alu 1 147 0 9 775 484 235 34 11 chr17 24941964 24942090 -70330561 - PB1D10 SINE Alu -12 137 12 9 775 237 309 21 0 chr17 24942121 24942218 -70330433 + CT-rich Low_complexity Low_complexity 2 100 0 9 775 752 257 10 19 chr17 24942225 24942380 -70330271 - ID_B1 SINE B4 -47 245 82 9 775 233 190 63 0 chr17 24942504 24942583 -70330068 + (TA)n Simple_repeat Simple_repeat 2 85 0 9 775 385 246 72 29 chr17 24942583 24942721 -70329930 - L1MC1 LINE L1 -279 6054 5911 9 775 510 308 152 16 chr17 24942745 24943002 -70329649 + B4A SINE B4 1 292 0 9 775 716 262 0 0 chr17 24943053 24943194 -70329457 - RSINE1 SINE B4 -21 144 4 9 775 33 25 0 0 chr17 24943200 24943240 -70329411 + AT_rich Low_complexity Low_complexity 1 40 0 9 775 841 180 169 0 chr17 24944150 24944322 -70328329 + B3 SINE B2 2 202 -14 9 775 224 240 20 0 chr17 24944330 24944380 -70328271 + B1F1 SINE Alu 1 51 -98 9 775 687 173 10 9 chr17 24944399 24944531 -70328120 + RSINE1 SINE B4 1 128 -37 9 775 1186 69 0 0 chr17 24944576 24944721 -70327930 + B1_Mus2 SINE Alu 1 145 -2 9 775 297 0 0 0 chr17 24944721 24944754 -70327897 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 9 775 251 319 43 0 chr17 24944820 24944914 -70327737 - PB1D10 SINE Alu -8 109 12 9 775 282 296 23 0 chr17 24946015 24946103 -70326548 + ID_B1 SINE B4 129 218 -6 9 775 1492 58 16 0 chr17 24946174 24946364 -70326287 - B2_Mm1a SINE B2 0 193 1 9 775 219 69 0 0 chr17 24946656 24946685 -70325966 + (TATG)n Simple_repeat Simple_repeat 4 32 0 9 775 539 284 24 0 chr17 24946724 24946851 -70325800 - B3A SINE B2 -68 130 1 1 775 374 256 56 0 chr17 24946860 24946950 -70325701 - PB1D10 SINE Alu -16 101 7 1 775 550 316 20 13 chr17 24946980 24947131 -70325520 + RSINE1 SINE B4 2 153 -12 1 775 261 225 230 40 chr17 24947646 24947794 -70324857 - ORR1D1 LTR MaLR -3 376 201 1 775 234 208 0 0 chr17 24947842 24947895 -70324756 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 1 775 885 198 16 33 chr17 24947906 24948089 -70324562 - ORR1D1 LTR MaLR -194 180 1 1 775 715 220 62 0 chr17 24948109 24948286 -70324365 - B3 SINE B2 -8 208 21 1 775 795 199 0 0 chr17 24948493 24948634 -70324017 - B1_Mur2 SINE Alu -8 141 1 1 775 230 235 33 56 chr17 24948634 24948724 -70323927 - ID_B1 SINE B4 -3 221 134 1 775 814 226 52 42 chr17 24948768 24948981 -70323670 - B3 SINE B2 0 216 2 1 775 456 252 63 21 chr17 24949004 24949146 -70323505 - B1F SINE Alu -1 148 1 1 775 382 304 35 9 chr17 24949229 24949345 -70323306 - RSINE1 SINE B4 -26 139 21 1 775 417 129 0 0 chr17 24949384 24949454 -70323197 + (TCC)n Simple_repeat Simple_repeat 2 71 0 1 775 367 336 50 62 chr17 24949465 24949775 -70322876 - B4 SINE B4 0 292 1 1 775 23 78 0 0 chr17 24949882 24949933 -70322718 + AT_rich Low_complexity Low_complexity 1 51 0 1 775 528 230 184 44 chr17 24950164 24950414 -70322237 - RMER21B LTR ERV1 -275 567 283 1 775 1138 116 0 31 chr17 24950490 24950686 -70321965 + RMER17A2 LTR ERVK 1 190 -716 1 775 449 134 24 12 chr17 24950680 24950763 -70321888 - RMER17A2 LTR ERVK -822 84 1 1 775 273 29 0 0 chr17 24950958 24950992 -70321659 + (GAAAA)n Simple_repeat Simple_repeat 3 36 0 1 775 24 0 0 0 chr17 24951042 24951066 -70321585 + AT_rich Low_complexity Low_complexity 1 24 0 1 775 256 318 145 90 chr17 24951113 24951258 -70321393 + RSINE1 SINE B4 13 165 0 1 775 27 29 0 0 chr17 24951285 24951319 -70321332 + AT_rich Low_complexity Low_complexity 1 34 0 1 775 529 233 155 0 chr17 24951442 24951571 -70321080 - B1_Mur1 SINE Alu 0 149 1 1 775 254 182 53 29 chr17 24951725 24951800 -70320851 - PB1 SINE Alu -56 93 27 1 775 609 164 0 19 chr17 24951789 24951895 -70320756 - B1_Mur4 SINE Alu -42 108 5 1 775 1229 177 29 0 chr17 24952048 24952257 -70320394 - B3 SINE B2 0 216 2 1 775 1050 211 14 5 chr17 24952405 24952614 -70320037 - B3 SINE B2 -5 211 1 1 775 192 97 0 0 chr17 24952744 24952775 -70319876 + (T)n Simple_repeat Simple_repeat 1 31 0 1 775 1286 7 0 13 chr17 24952775 24952924 -70319727 - B1_Mm SINE Alu 0 147 1 1 775 22 0 0 0 chr17 24952945 24952967 -70319684 + AT_rich Low_complexity Low_complexity 1 22 0 1 775 993 17 0 0 chr17 24953894 24954009 -70318642 + (TC)n Simple_repeat Simple_repeat 2 116 0 1 775 587 146 6 251 chr17 24954010 24954193 -70318458 - B1_Mus1 SINE Alu -10 138 1 1 775 1240 74 85 0 chr17 24954277 24954453 -70318198 - B2_Mm2 SINE B2 -4 191 1 1 775 516 74 25 0 chr17 24954493 24954574 -70318077 - L1Md_F3 LINE L1 -1 6583 6501 1 775 661 207 0 0 chr17 24955387 24955503 -70317148 + B1_Mur1 SINE Alu 23 138 -11 1 775 351 0 0 0 chr17 24955503 24955542 -70317109 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 775 204 178 44 0 chr17 24955567 24955612 -70317039 + (CAGAGA)n Simple_repeat Simple_repeat 3 49 0 1 775 317 304 65 0 chr17 24955617 24955709 -70316942 - PB1D10 SINE Alu -18 99 2 1 775 288 0 0 0 chr17 24957048 24957080 -70315571 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1 775 255 172 0 91 chr17 24957095 24957166 -70315485 - B2_Mm2 SINE B2 -107 109 47 1 775 1146 136 11 0 chr17 24957213 24957389 -70315262 - B2_Mm1t SINE B2 -14 179 2 1 775 21 0 0 0 chr17 24957415 24957436 -70315215 + AT_rich Low_complexity Low_complexity 1 21 0 1 775 293 329 0 0 chr17 24957452 24957534 -70315117 - MER2 DNA MER2_type -6 339 258 1 775 513 260 144 3 chr17 24957764 24957954 -70314697 + B3A SINE B2 2 213 -3 1 775 387 281 17 52 chr17 24958032 24958205 -70314446 - LTR16A1 LTR ERVL 0 456 290 1 775 716 252 69 5 chr17 24959325 24959528 -70313123 + B3 SINE B2 1 216 0 1 775 715 217 200 0 chr17 24959807 24959982 -70312669 + B3 SINE B2 1 210 -6 1 775 24 0 0 0 chr17 24959990 24960014 -70312637 + AT_rich Low_complexity Low_complexity 1 24 0 1 775 1235 68 61 28 chr17 24960020 24960201 -70312450 + B2_Mm2 SINE B2 2 188 -7 1 775 276 333 56 14 chr17 24960260 24960403 -70312248 - B1F2 SINE Alu 0 149 1 1 775 22 0 0 0 chr17 24960426 24960448 -70312203 + AT_rich Low_complexity Low_complexity 1 22 0 1 775 691 140 32 89 chr17 24960834 24960991 -70311660 + B1_Mus1 SINE Alu 1 148 0 1 775 612 106 0 0 chr17 24960991 24961085 -70311566 + (GAAA)n Simple_repeat Simple_repeat 3 96 0 1 775 7015 166 38 32 chr17 24961910 24963717 -70308934 - Lx5 LINE L1 -9 7041 5221 1 775 612 0 0 0 chr17 24963896 24963964 -70308687 + (TC)n Simple_repeat Simple_repeat 1 68 0 1 775 751 187 22 0 chr17 24963973 24964107 -70308544 - B1_Mur2 SINE Alu -11 138 2 1 775 245 133 578 0 chr17 24964413 24964503 -70308148 - B1_Mur3 SINE Alu -7 142 1 1 775 473 264 0 9 chr17 24964505 24964616 -70308035 - PB1D10 SINE Alu -7 110 1 1 775 415 314 25 8 chr17 24965540 24965662 -70306989 + RSINE1 SINE B4 18 141 -24 1 775 414 0 0 0 chr17 24965675 24965721 -70306930 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 775 21 0 0 0 chr17 24965736 24965757 -70306894 + AT_rich Low_complexity Low_complexity 1 21 0 1 775 227 301 60 0 chr17 24966381 24966464 -70306187 - ORR1E LTR MaLR -271 88 1 1 775 328 245 237 19 chr17 24966537 24966693 -70305958 + B3A SINE B2 15 211 -5 1 775 591 247 0 19 chr17 24966716 24966873 -70305778 - Lx6 LINE L1 -43 7417 7264 1 775 251 210 262 29 chr17 24966874 24966977 -70305674 - B4 SINE B4 -55 237 111 1 775 489 211 42 0 chr17 24966891 24966986 -70305665 - PB1D9 SINE Alu -5 115 17 1 775 236 240 0 0 chr17 24967040 24967090 -70305561 - L1MB1 LINE L1 -90 6099 6050 1 775 946 159 0 7 chr17 24967938 24968084 -70304567 + B1_Mur2 SINE Alu 5 149 0 1 775 248 296 1 0 chr17 24968130 24968198 -70304453 + B1F SINE Alu 1 69 -78 1 775 941 167 0 0 chr17 24968215 24968359 -70304292 - B1_Mus1 SINE Alu 0 148 5 1 775 867 228 48 5 chr17 24968620 24968827 -70303824 - B3 SINE B2 0 216 1 1 775 1196 54 0 13 chr17 24968989 24969138 -70303513 + B1_Mus2 SINE Alu 1 147 0 1 775 224 338 25 12 chr17 24969509 24969590 -70303061 - ID4 SINE ID -1 82 1 1 775 882 151 20 14 chr17 24969662 24969810 -70302841 - B1_Mur1 SINE Alu 0 149 1 1 775 767 202 144 21 chr17 24969823 24970010 -70302641 - B3 SINE B2 -6 210 1 1 775 1815 243 52 50 chr17 24970214 24970757 -70301894 - Lx6 LINE L1 -26 7434 6544 1 775 22 56 0 0 chr17 24970802 24970838 -70301813 + AT_rich Low_complexity Low_complexity 1 36 0 1 775 1858 192 72 5 chr17 24971157 24971544 -70301107 + MTC LTR MaLR 1 413 -8 1 775 1097 205 14 10 chr17 24972276 24972483 -70300168 - B3 SINE B2 -5 211 4 1 775 416 252 72 35 chr17 24972584 24972735 -70299916 - PB1D9 SINE Alu -8 141 3 1 775 583 268 7 7 chr17 24972942 24973085 -70299566 + ID_B1 SINE B4 82 224 0 1 775 290 26 0 25 chr17 24973087 24973127 -70299524 + (GAAAA)n Simple_repeat Simple_repeat 2 40 0 1 775 312 269 26 0 chr17 24973530 24973608 -70299043 - BC1_Mm scRNA scRNA -69 83 4 1 775 195 69 0 0 chr17 24973667 24973696 -70298955 + (A)n Simple_repeat Simple_repeat 1 29 0 1 775 918 264 10 0 chr17 24974667 24974868 -70297783 - B3 SINE B2 -12 204 2 1 775 1008 183 10 5 chr17 24974993 24975185 -70297466 + B3 SINE B2 4 196 -20 1 775 281 154 11 133 chr17 24975213 24975303 -70297348 - PB1D7 SINE Alu 0 120 42 1 775 268 57 113 0 chr17 24975301 24975354 -70297297 - B2_Mm2 SINE B2 0 195 137 1 775 257 177 125 56 chr17 24975396 24975435 -70297216 - B1F SINE Alu -19 101 54 1 775 1365 73 11 0 chr17 24975435 24975612 -70297039 - B2_Mm1t SINE B2 -14 179 1 1 775 257 169 116 58 chr17 24975612 24975651 -70297000 - B1F SINE Alu -96 53 15 1 775 312 301 51 42 chr17 24975778 24975896 -70296755 + PB1 SINE Alu 1 119 -8 1 775 386 310 9 0 chr17 24976136 24976252 -70296399 + PB1D10 SINE Alu 1 117 0 1 775 372 218 38 13 chr17 24977833 24977912 -70294739 - PB1D10 SINE Alu -15 102 22 1 775 331 300 67 0 chr17 24977922 24978012 -70294639 - ID_B1 SINE B4 -45 179 84 1 775 835 90 8 0 chr17 24978773 24978895 -70293756 + B1_Mur4 SINE Alu 15 137 -13 1 775 415 301 132 7 chr17 24978908 24979189 -70293462 - L1MB4 LINE L1 -31 6149 5834 1 775 768 201 7 14 chr17 24979228 24979374 -70293277 + B1_Mur3 SINE Alu 5 149 0 1 775 359 339 40 0 chr17 24979518 24979532 -70293119 - B1_Mur3 SINE Alu -20 129 1 1 775 492 273 0 0 chr17 24979532 24979642 -70293009 - ID_B1 SINE B4 -33 191 82 1 775 779 130 137 123 chr17 24979670 24979881 -70292770 - B3 SINE B2 -2 214 1 1 775 402 220 20 0 chr17 24980324 24980424 -70292227 - Lx7 LINE L1 0 7696 7595 1 775 1146 63 7 0 chr17 24980474 24980616 -70292035 + B1_Mus1 SINE Alu 1 143 -5 1 775 1138 217 78 11 chr17 24980616 24980886 -70291765 - Lx7 LINE L1 -457 7239 6952 1 775 192 111 0 0 chr17 24981040 24981076 -70291575 + (TTGG)n Simple_repeat Simple_repeat 4 39 0 1 775 839 153 0 0 chr17 24981076 24981213 -70291438 - B1_Mur4 SINE Alu 0 150 14 1 775 1106 253 68 13 chr17 24982103 24982411 -70290240 - RMER15 LTR ERVL -37 538 214 1 775 572 264 74 49 chr17 24982481 24982684 -70289967 - RMER15 LTR ERVL -343 232 25 1 775 1123 51 0 0 chr17 24982882 24983020 -70289631 + B1_Mm SINE Alu 1 138 -9 1 775 888 111 0 0 chr17 24983446 24983581 -70289070 + (TCTA)n Simple_repeat Simple_repeat 4 138 0 1 775 277 191 0 0 chr17 24983581 24983628 -70289023 - B1_Mur1 SINE Alu -10 139 93 1 775 340 290 39 115 chr17 24983630 24983655 -70288996 - MT2B LTR ERVL -280 321 179 1 775 740 200 0 0 chr17 24983655 24983785 -70288866 - B1_Mur1 SINE Alu -5 144 15 1 775 192 40 0 0 chr17 24983883 24983908 -70288743 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 775 224 196 0 21 chr17 24983957 24984004 -70288647 - ID_B1 SINE B4 -95 129 84 1 775 241 158 0 0 chr17 24983967 24984005 -70288646 - B1_Mus2 SINE Alu -108 39 2 1 775 905 192 66 0 chr17 24984021 24984219 -70288432 - B3 SINE B2 0 216 6 1 775 363 215 25 0 chr17 24984823 24984902 -70287749 + PB1D10 SINE Alu 32 112 -5 1 775 247 209 57 43 chr17 24985097 24985167 -70287484 + PB1D10 SINE Alu 40 110 -7 1 775 414 100 0 0 chr17 24989085 24989145 -70283506 + (A)n Simple_repeat Simple_repeat 1 60 0 1 775 288 278 62 0 chr17 24989145 24989242 -70283409 + B1F1 SINE Alu 42 144 -5 1 775 1345 82 11 11 chr17 24989255 24989441 -70283210 + B2_Mm2 SINE B2 3 188 -7 1 775 758 171 20 46 chr17 24989979 24990132 -70282519 + B1_Mur3 SINE Alu 1 149 0 1 775 218 105 0 26 chr17 24990133 24990172 -70282479 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 1 775 201 162 0 0 chr17 24990189 24990226 -70282425 + A-rich Low_complexity Low_complexity 4 40 0 1 775 2575 150 110 22 chr17 24990765 24991024 -70281627 - RMER4B LTR ERVK 0 585 289 1 775 1283 47 13 166 chr17 24991024 24991253 -70281398 + B2_Mm2 SINE B2 2 195 0 1 775 2575 150 110 22 chr17 24991253 24991531 -70281120 - RMER4B LTR ERVK -297 288 1 1 775 375 23 0 0 chr17 24991792 24991836 -70280815 + (GA)n Simple_repeat Simple_repeat 2 45 0 1 775 225 239 0 173 chr17 24991914 24991995 -70280656 + B1_Mur1 SINE Alu 40 106 -43 1 775 232 250 36 0 chr17 24992035 24992091 -70280560 - PB1D7 SINE Alu -1 119 62 1 775 210 37 0 0 chr17 24992149 24992176 -70280475 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 775 639 26 0 0 chr17 24994587 24994664 -70277987 + (TG)n Simple_repeat Simple_repeat 1 77 0 1 775 508 212 62 0 chr17 24995572 24995685 -70276966 - PB1D7 SINE Alu 0 120 1 1 775 1343 103 108 0 chr17 24995759 24995962 -70276689 - URR1A DNA MER1_type 0 226 2 1 775 1071 45 0 0 chr17 24996285 24996418 -70276233 + (TG)n Simple_repeat Simple_repeat 2 134 0 1 775 1092 191 142 8 chr17 24996441 24996694 -70275957 + MTD LTR MaLR 1 287 -132 1 775 356 206 41 10 chr17 24996743 24996841 -70275810 - B4 SINE B4 -191 101 1 1 775 420 252 56 24 chr17 24998871 24998997 -70273654 + B1F SINE Alu 18 147 -2 1 775 894 56 17 61 chr17 24999011 24999177 -70273474 + B1_Mus1 SINE Alu 1 149 0 1 775 1157 223 0 0 chr17 24999598 24999809 -70272842 - B3 SINE B2 -5 211 1 1 775 404 236 17 83 chr17 25002664 25002784 -70269867 + PB1D9 SINE Alu 1 112 -8 1 775 273 175 0 18 chr17 25003375 25003436 -70269215 + PB1D7 SINE Alu 61 120 0 2 775 210 143 0 0 chr17 25003502 25003537 -70269114 + (CATATA)n Simple_repeat Simple_repeat 5 39 0 3 775 840 164 13 27 chr17 25004220 25004370 -70268281 + B1_Mur3 SINE Alu 2 149 0 4 775 202 109 43 21 chr17 25005207 25005254 -70267397 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 775 246 270 16 0 chr17 25005270 25005333 -70267318 - tRNA-Ala-GCA tRNA tRNA -1 74 11 6 775 256 333 0 0 chr17 25005282 25005348 -70267303 - ID4_ SINE ID -16 67 2 7 775 370 311 53 71 chr17 25005455 25005548 -70267103 + ID_B1 SINE B4 3 223 -1 8 775 442 280 15 0 chr17 25005548 25005680 -70266971 + B1F SINE Alu 15 148 -1 9 775 256 193 70 0 chr17 25005847 25005904 -70266747 + L1M4 LINE L1 3387 3447 -2699 1 775 230 281 309 6 chr17 25006182 25006347 -70266304 + L1M4 LINE L1 3613 3827 -2319 1 775 616 265 123 4 chr17 25006524 25006759 -70265892 - MLT1D LTR MaLR -34 471 209 1 775 413 307 189 32 chr17 25007108 25007990 -70264661 + L1M4 LINE L1 4229 5249 -897 1 775 975 237 14 0 chr17 25008048 25008259 -70264392 + B3 SINE B2 2 215 -1 1 775 686 184 1 21 chr17 25008264 25008418 -70264233 + B1_Mur3 SINE Alu 2 141 -7 1 775 27 0 0 0 chr17 25008437 25008464 -70264187 + AT_rich Low_complexity Low_complexity 1 27 0 1 775 499 325 75 33 chr17 25008508 25008721 -70263930 + B4A SINE B4 1 222 -70 1 775 2130 312 67 43 chr17 25008784 25009515 -70263136 + Lx5 LINE L1 4686 5448 -432 1 775 186 43 0 0 chr17 25009515 25009538 -70263113 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 775 2130 312 67 43 chr17 25009538 25009869 -70262782 + Lx5 LINE L1 5449 5772 -108 1 775 587 201 140 30 chr17 25009885 25010049 -70262602 + B3 SINE B2 1 182 -34 1 775 903 168 0 0 chr17 25010098 25010235 -70262416 + B1_Mur4 SINE Alu 1 137 -13 1 775 955 116 12 12 chr17 25010238 25010404 -70262247 + (GAAA)n Simple_repeat Simple_repeat 3 168 0 2 775 255 73 98 0 chr17 25010406 25010447 -70262204 + Lx5 LINE L1 5800 5844 -1206 1 775 455 301 14 22 chr17 25010486 25010625 -70262026 + Lx9 LINE L1 5830 5967 -1677 2 775 944 188 25 30 chr17 25010705 25010908 -70261743 + RLTR20C LTR ERVK 1 202 -332 2 775 2330 70 122 3 chr17 25010908 25011237 -70261414 - RLTR9A LTR ERVK 0 368 1 2 775 1476 150 7 26 chr17 25011237 25011510 -70261141 - ORR1A4 LTR MaLR -61 268 1 2 775 270 267 31 87 chr17 25011511 25011574 -70261077 + Lx8 LINE L1 6064 6127 -1569 2 775 4758 98 143 39 chr17 25011574 25012393 -70260258 + RMER17A2 LTR ERVK 3 906 0 2 775 270 302 19 94 chr17 25012393 25012456 -70260195 + Lx8 LINE L1 6125 6180 -1293 2 775 855 208 52 5 chr17 25012464 25012657 -70259994 + B3 SINE B2 10 211 -5 2 775 409 269 83 8 chr17 25012662 25012782 -70259869 + Lx7 LINE L1 6195 6323 -1373 2 775 753 129 0 17 chr17 25012782 25012900 -70259751 + B1_Mur4 SINE Alu 31 146 -4 2 775 447 273 45 7 chr17 25012932 25013087 -70259564 + Lx8 LINE L1 6318 6478 -995 2 775 431 308 26 0 chr17 25013404 25013521 -70259130 + PB1D7 SINE Alu 1 120 0 3 775 583 255 7 33 chr17 25013516 25013666 -70258985 + ID_B1 SINE B4 79 224 0 3 775 324 242 37 104 chr17 25013688 25013822 -70258829 + MT2B LTR ERVL 154 278 -323 3 775 871 144 0 21 chr17 25013705 25013847 -70258804 + B1_Mur4 SINE Alu 10 148 -2 3 775 207 0 0 0 chr17 25014295 25014318 -70258333 + (GTGTG)n Simple_repeat Simple_repeat 3 25 0 3 775 475 269 92 0 chr17 25020283 25020424 -70252227 + RSINE1 SINE B4 4 157 -8 3 775 193 271 59 59 chr17 25024291 25024393 -70248258 - L2 LINE L2 -836 2583 2482 3 775 492 181 143 0 chr17 25025280 25025385 -70247266 - PB1D9 SINE Alu 0 120 1 3 775 225 140 220 0 chr17 25025458 25025508 -70247143 - RSINE1 SINE B4 -28 137 77 3 775 23 33 0 0 chr17 25033511 25033541 -70239110 + GC_rich Low_complexity Low_complexity 1 30 0 3 776 369 271 154 8 chr17 25036973 25037103 -70235548 - B1F SINE Alu 0 149 1 4 776 798 212 422 3 chr17 25040453 25040747 -70231904 + MTD LTR MaLR 1 417 -2 4 776 238 333 92 20 chr17 25043974 25044072 -70228579 - PB1D10 SINE Alu -1 116 12 4 776 27 0 0 0 chr17 25046175 25046202 -70226449 + AT_rich Low_complexity Low_complexity 1 27 0 4 776 845 95 17 0 chr17 25046370 25046486 -70226165 - PB1D9 SINE Alu -2 118 1 4 776 215 220 169 0 chr17 25047441 25047500 -70225151 - ID4_ SINE ID -3 80 12 4 776 233 185 167 0 chr17 25047447 25047501 -70225150 - tRNA-Ala-GCY_ tRNA tRNA -8 67 5 4 776 1140 88 0 0 chr17 25047692 25047839 -70224812 + B1_Mus2 SINE Alu 1 147 0 4 776 270 0 0 0 chr17 25047843 25047873 -70224778 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 4 776 426 85 0 0 chr17 25048882 25048941 -70223710 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 776 530 155 125 10 chr17 25050194 25050298 -70222353 - PB1D9 SINE Alu -4 116 1 5 776 260 121 35 0 chr17 25050857 25050915 -70221736 + (TCTG)n Simple_repeat Simple_repeat 2 61 0 5 776 345 242 48 95 chr17 25050920 25051025 -70221626 - B1F2 SINE Alu -20 100 1 5 776 531 247 258 4 chr17 25051025 25051264 -70221387 + MLT1B LTR MaLR 80 379 -11 5 776 290 333 104 0 chr17 25052846 25052981 -70219670 + MER20 DNA MER1_type 70 218 -1 5 776 307 308 62 42 chr17 25053566 25053759 -70218892 + L1MEb LINE L1 743 939 -5131 5 776 1094 190 39 5 chr17 25055297 25055503 -70217148 - B3 SINE B2 0 216 4 5 776 750 251 57 0 chr17 25055607 25055782 -70216869 - B3A SINE B2 -13 185 1 5 776 313 238 107 0 chr17 25055845 25055929 -70216722 - B4A SINE B4 -59 233 141 5 776 386 293 14 48 chr17 25058915 25059062 -70213589 - B1F SINE Alu -7 142 1 5 776 263 288 15 15 chr17 25060029 25060096 -70212555 + RMER30 DNA MER1_type 133 199 -3 6 776 258 251 69 66 chr17 25061457 25061574 -70211077 + ID4 SINE ID 1 115 -37 6 776 1210 35 14 0 chr17 25061637 25061782 -70210869 + B1_Mus2 SINE Alu 1 147 0 6 776 25 0 0 0 chr17 25063133 25063158 -70209493 + AT_rich Low_complexity Low_complexity 1 25 0 6 776 1169 49 0 7 chr17 25063166 25063305 -70209346 + B1_Mus1 SINE Alu 2 140 -8 6 776 375 73 0 0 chr17 25063305 25063360 -70209291 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 6 776 484 258 60 65 chr17 25063602 25063632 -70209019 - B3A SINE B2 0 198 174 6 776 180 0 0 0 chr17 25063632 25063652 -70208999 + (GGGTG)n Simple_repeat Simple_repeat 4 23 0 6 776 484 258 60 65 chr17 25063652 25063820 -70208831 - B3A SINE B2 -25 173 2 6 776 309 109 0 0 chr17 25063853 25063899 -70208752 + (TTA)n Simple_repeat Simple_repeat 3 48 0 6 776 800 232 0 0 chr17 25063903 25064045 -70208606 - B1_Mur3 SINE Alu -6 143 2 6 776 941 171 10 45 chr17 25064047 25064249 -70208402 - B2_Mm2 SINE B2 0 195 1 7 776 1164 56 21 0 chr17 25065135 25065279 -70207372 + B1_Mus1 SINE Alu 2 148 0 7 776 204 40 0 0 chr17 25065279 25065304 -70207347 + (A)n Simple_repeat Simple_repeat 1 25 0 7 776 288 0 0 0 chr17 25065306 25065338 -70207313 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 776 219 139 0 0 chr17 25065599 25065635 -70207016 + (T)n Simple_repeat Simple_repeat 1 36 0 7 776 1173 62 7 0 chr17 25065638 25065783 -70206868 - B1_Mm SINE Alu 0 147 2 7 776 395 220 130 0 chr17 25065787 25065887 -70206764 - B1_Mur1 SINE Alu -2 147 35 7 776 966 190 29 20 chr17 25065896 25066100 -70206551 - B3 SINE B2 -10 206 1 7 776 1301 34 0 0 chr17 25067037 25067184 -70205467 + B1_Mm SINE Alu 1 147 0 7 776 1690 36 0 0 chr17 25067707 25067900 -70204751 - B2_Mm1a SINE B2 0 193 1 7 776 896 128 11 113 chr17 25067900 25068085 -70204566 - B2_Mm2 SINE B2 0 195 30 8 776 310 301 0 12 chr17 25068055 25068139 -70204512 + PB1D10 SINE Alu 30 112 -5 8 776 592 211 0 120 chr17 25068150 25068317 -70204334 + B1_Mur3 SINE Alu 2 148 -1 8 776 1143 63 14 0 chr17 25068413 25068555 -70204096 + B1_Mus1 SINE Alu 5 148 0 8 776 201 39 0 0 chr17 25068556 25068582 -70204069 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 8 776 1011 52 123 0 chr17 25068590 25068745 -70203906 - B2_Mm2 SINE B2 -2 193 20 8 776 307 341 84 49 chr17 25068838 25069063 -70203588 + B4 SINE B4 2 234 -58 8 776 968 47 132 0 chr17 25069325 25069454 -70203197 + B1_Mus2 SINE Alu 2 147 0 8 776 1109 83 0 0 chr17 25069867 25070011 -70202640 - B1_Mus1 SINE Alu 0 148 5 8 776 333 326 83 28 chr17 25070580 25070621 -70202030 - MER3 DNA MER1_type -14 195 145 8 776 300 268 12 12 chr17 25070621 25070704 -70201947 + ID4 SINE ID 1 83 0 9 776 333 326 83 28 chr17 25070704 25070842 -70201809 - MER3 DNA MER1_type -65 144 6 8 776 1084 97 102 0 chr17 25074349 25074525 -70198126 - B2_Mm2 SINE B2 0 195 2 9 776 739 214 87 41 chr17 25074611 25074806 -70197845 - B3 SINE B2 -1 215 12 9 776 279 186 11 0 chr17 25074885 25074936 -70197715 - B1_Mur1 SINE Alu -16 133 79 9 776 2370 122 13 23 chr17 25075025 25075411 -70197240 + RLTR14 LTR ERV1 1 382 0 9 776 583 265 48 18 chr17 25075561 25075726 -70196925 - B3 SINE B2 -19 197 28 9 776 839 203 41 104 chr17 25075834 25076054 -70196597 - B3 SINE B2 -10 206 1 9 776 569 263 27 74 chr17 25076140 25076288 -70196363 - B1_Mur4 SINE Alu -2 148 8 9 776 1288 78 77 6 chr17 25076399 25076580 -70196071 + B2_Mm2 SINE B2 2 195 0 9 776 748 52 0 0 chr17 25076581 25076677 -70195974 - B1_Mus1 SINE Alu -51 97 2 9 776 437 204 105 21 chr17 25076677 25076772 -70195879 - B1_Mur1 SINE Alu -12 137 35 1 776 981 78 8 0 chr17 25076884 25077012 -70195639 - B1_Mur4 SINE Alu -11 139 11 1 776 23 0 0 0 chr17 25077012 25077035 -70195616 + AT_rich Low_complexity Low_complexity 1 23 0 1 776 225 0 0 0 chr17 25077103 25077128 -70195523 + (A)n Simple_repeat Simple_repeat 1 25 0 1 776 632 180 1 10 chr17 25077208 25077326 -70195325 - ORR1D2 LTR MaLR 0 370 257 1 776 642 26 0 0 chr17 25077326 25077402 -70195249 + (CAAG)n Simple_repeat Simple_repeat 3 78 0 1 776 573 207 16 16 chr17 25077402 25077415 -70195236 - ORR1D2 LTR MaLR -118 256 244 1 776 261 287 30 50 chr17 25077426 25077525 -70195126 - ORR1D2 LTR MaLR -231 139 43 1 776 570 101 22 12 chr17 25077509 25077599 -70195052 + B1_Mus2 SINE Alu 27 135 -12 1 776 252 0 0 0 chr17 25077599 25077627 -70195024 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1 776 385 238 27 48 chr17 25077973 25078101 -70194550 - B1_Mus1 SINE Alu -20 129 1 1 776 211 336 33 58 chr17 25078101 25078137 -70194514 - ID SINE ID -148 76 44 1 776 1874 118 40 103 chr17 25078202 25078373 -70194278 - ORR1A2 LTR MaLR 0 327 155 1 776 1146 89 0 0 chr17 25078373 25078519 -70194132 + B1_Mus2 SINE Alu 2 147 0 1 776 1874 118 40 103 chr17 25078519 25078696 -70193955 - ORR1A2 LTR MaLR -173 154 1 1 776 1039 82 0 0 chr17 25079183 25079317 -70193334 + B1_Mus1 SINE Alu 2 135 -13 1 776 233 29 29 0 chr17 25079317 25079351 -70193300 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1 776 255 262 114 45 chr17 25079762 25079894 -70192757 - MamRep1161 DNA TcMar -805 152 12 1 776 2453 57 9 19 chr17 25081802 25082124 -70190527 + ORR1A2 LTR MaLR 1 319 -8 1 776 1112 151 0 21 chr17 25082145 25082335 -70190316 + URR1B DNA MER1_type 39 224 -1 1 776 265 286 10 62 chr17 25082741 25082838 -70189813 - ID_B1 SINE B4 0 224 133 1 776 285 305 18 37 chr17 25082950 25083059 -70189592 + B3A SINE B2 91 197 -1 1 776 225 330 31 31 chr17 25083102 25083199 -70189452 + ID_B1 SINE B4 16 112 -112 1 776 23 0 0 0 chr17 25083306 25083329 -70189322 + AT_rich Low_complexity Low_complexity 1 23 0 1 776 229 225 192 27 chr17 25083464 25083537 -70189114 + PB1D7 SINE Alu 24 108 -12 1 776 472 172 128 29 chr17 25083530 25083632 -70189019 - PB1D9 SINE Alu -2 118 7 1 776 590 254 30 7 chr17 25084019 25084154 -70188497 - RSINE1 SINE B4 -22 143 6 1 776 548 218 0 43 chr17 25084290 25084405 -70188246 - PB1D9 SINE Alu -10 110 1 1 776 336 209 116 50 chr17 25084415 25084536 -70188115 - L1MC5 LINE L1 -922 7039 6911 1 776 475 274 90 86 chr17 25084777 25085021 -70187630 + RLTR11B LTR ERVK 177 421 -32 1 776 530 320 21 51 chr17 25086465 25086699 -70185952 + RMER15 LTR ERVL 335 561 -14 1 776 1145 101 0 25 chr17 25087025 25087187 -70185464 - B2_Mm2 SINE B2 -37 158 1 1 776 584 174 143 42 chr17 25087204 25087372 -70185279 + RMER4B LTR ERVK 72 256 -329 1 776 2476 95 3 0 chr17 25087575 25087901 -70184750 - ORR1A2 LTR MaLR 0 327 1 1 776 1058 59 7 0 chr17 25088447 25088582 -70184069 + B1_Mus2 SINE Alu 5 140 -7 1 776 192 77 0 0 chr17 25088588 25088614 -70184037 + (A)n Simple_repeat Simple_repeat 1 26 0 1 776 648 255 103 118 chr17 25088614 25089080 -70183571 + RMER4B LTR ERVK 72 457 -9 1 776 202 253 168 42 chr17 25089255 25089350 -70183301 + MIR3 SINE MIR 56 162 -46 1 776 482 298 46 0 chr17 25090013 25090144 -70182507 + B3A SINE B2 20 156 -42 1 776 293 349 0 0 chr17 25090297 25090380 -70182271 - PB1D10 SINE Alu -21 96 14 1 776 399 335 67 17 chr17 25090407 25090586 -70182065 + MIRb SINE MIR 30 217 -51 1 776 761 133 140 37 chr17 25091145 25091234 -70181417 + B2_Mm2 SINE B2 1 110 -85 1 776 1262 48 0 0 chr17 25091234 25091381 -70181270 - B1_Mm SINE Alu 0 147 1 1 776 761 133 140 37 chr17 25091381 25091455 -70181196 + B2_Mm2 SINE B2 111 181 -14 1 776 43 47 0 0 chr17 25091460 25091524 -70181127 + AT_rich Low_complexity Low_complexity 1 64 0 1 776 931 130 7 0 chr17 25091530 25091668 -70180983 - B1_Mur4 SINE Alu -8 142 4 1 776 183 114 0 0 chr17 25091701 25091736 -70180915 + (A)n Simple_repeat Simple_repeat 1 35 0 1 776 275 258 48 0 chr17 25092356 25092418 -70180233 + PB1D10 SINE Alu 6 70 -47 1 776 590 158 35 17 chr17 25092422 25092538 -70180113 + PB1D9 SINE Alu 3 120 0 1 776 1801 147 55 3 chr17 25092551 25092858 -70179793 + MTC LTR MaLR 13 335 -86 1 776 421 245 32 11 chr17 25093256 25093351 -70179300 + PB1D10 SINE Alu 7 103 -14 1 776 276 324 0 0 chr17 25094214 25094285 -70178366 + PB1D10 SINE Alu 1 71 -46 1 776 461 256 15 90 chr17 25094232 25094296 -70178355 + ID_B1 SINE B4 100 161 -63 1 776 543 142 164 52 chr17 25094296 25094430 -70178221 + B1_Mur2 SINE Alu 1 149 0 1 776 461 256 15 90 chr17 25094430 25094498 -70178153 + ID_B1 SINE B4 162 222 -2 1 776 477 227 64 0 chr17 25094609 25094719 -70177932 - B1_Mur2 SINE Alu -32 117 1 1 776 259 301 51 42 chr17 25094622 25094740 -70177911 - MT2B LTR ERVL -344 257 139 1 776 717 102 0 0 chr17 25095302 25095410 -70177241 + (TTTC)n Simple_repeat Simple_repeat 4 111 0 1 776 1067 80 7 0 chr17 25095416 25095554 -70177097 - B1_Mus1 SINE Alu -8 140 2 1 776 298 253 20 147 chr17 25095586 25095688 -70176963 - PB1D10 SINE Alu -11 106 18 1 776 420 224 71 10 chr17 25095606 25095705 -70176946 - ID_B1 SINE B4 -42 182 78 1 776 23 0 0 0 chr17 25098615 25098638 -70174013 + AT_rich Low_complexity Low_complexity 1 23 0 1 776 615 235 81 0 chr17 25100048 25100184 -70172467 + B1_Mur3 SINE Alu 1 147 -2 1 776 233 57 29 0 chr17 25100190 25100225 -70172426 + (GGGTG)n Simple_repeat Simple_repeat 1 36 0 1 776 1133 82 0 0 chr17 25100692 25100839 -70171812 + B1_Mus1 SINE Alu 2 148 0 1 776 321 89 0 0 chr17 25100846 25100891 -70171760 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 776 224 286 48 0 chr17 25102500 25102563 -70170088 + PB1D10 SINE Alu 41 106 -11 1 776 721 244 99 5 chr17 25103015 25103217 -70169434 + B4A SINE B4 5 225 -67 1 776 433 252 34 17 chr17 25103224 25103341 -70169310 + RSINE1 SINE B4 5 123 -42 1 776 506 297 59 66 chr17 25103582 25103838 -70168813 - B4A SINE B4 -38 254 1 1 776 512 270 0 17 chr17 25103996 25104113 -70168538 - PB1D7 SINE Alu 0 120 6 1 776 3755 109 96 62 chr17 25104394 25104787 -70167864 + RMER17A LTR ERVK 1 426 -325 1 776 1736 21 0 0 chr17 25104787 25104980 -70167671 - B2_Mm1a SINE B2 0 193 1 1 776 3755 109 96 62 chr17 25104980 25105312 -70167339 + RMER17A LTR ERVK 427 751 0 1 776 1015 90 0 0 chr17 25106798 25106931 -70165720 + B1_Mus2 SINE Alu 2 134 -13 1 776 387 0 0 0 chr17 25106931 25106974 -70165677 + (CAAA)n Simple_repeat Simple_repeat 1 43 0 1 776 273 298 34 34 chr17 25107151 25107269 -70165382 + L1ME3 LINE L1 6041 6158 -4 1 776 671 216 40 7 chr17 25110731 25110880 -70161771 + B3 SINE B2 48 201 -15 1 776 499 284 68 6 chr17 25110916 25111093 -70161558 + B3A SINE B2 1 188 -10 1 776 590 199 92 35 chr17 25111781 25111897 -70160754 + B1_Mur4 SINE Alu 1 118 -32 1 776 255 125 0 0 chr17 25111897 25111937 -70160714 + (CACG)n Simple_repeat Simple_repeat 4 43 0 1 776 590 199 92 35 chr17 25111937 25111961 -70160690 + B1_Mur4 SINE Alu 119 149 -1 1 776 309 281 207 27 chr17 25112603 25112753 -70159898 - MER58A DNA MER1_type 0 224 48 1 776 276 278 65 32 chr17 25112759 25112852 -70159799 + L1MB8 LINE L1 5896 5991 -187 1 776 502 311 34 54 chr17 25112951 25113247 -70159404 + B4A SINE B4 3 292 0 1 776 21 36 0 0 chr17 25113569 25113597 -70159054 + AT_rich Low_complexity Low_complexity 1 28 0 1 776 303 386 0 10 chr17 25113597 25113699 -70158952 - RSINE1 SINE B4 -11 154 54 1 776 226 308 25 13 chr17 25115816 25115895 -70156756 + ID4_ SINE ID 1 80 -3 1 776 1167 70 44 6 chr17 25116067 25116226 -70156425 + B2_Mm2 SINE B2 3 167 -28 1 776 302 301 12 0 chr17 25116739 25116822 -70155829 - B2_Mm2 SINE B2 -110 85 2 1 776 450 343 42 14 chr17 25116832 25116974 -70155677 - B1F1 SINE Alu -3 146 1 1 776 470 238 67 37 chr17 25117014 25117149 -70155502 + B1_Mur1 SINE Alu 9 147 -2 1 776 773 40 10 0 chr17 25117184 25117285 -70155366 + (GAAA)n Simple_repeat Simple_repeat 1 102 0 1 776 444 37 0 0 chr17 25117287 25117341 -70155310 + (GGGA)n Simple_repeat Simple_repeat 1 54 0 1 776 277 324 67 64 chr17 25117730 25118003 -70154648 + RSINE1 SINE B4 1 274 -18 1 776 304 325 187 33 chr17 25121258 25121589 -70151062 + L1MB5 LINE L1 5793 6174 0 1 776 503 233 34 17 chr17 25123370 25123488 -70149163 - PB1D9 SINE Alu 0 120 1 1 776 207 0 0 0 chr17 25124391 25124414 -70148237 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 1 776 276 184 14 1 chr17 25124846 25124916 -70147735 + L1_Mur2 LINE L1 5351 5456 -706 1 776 267 284 85 12 chr17 25125030 25125041 -70147610 + B4A SINE B4 69 155 -136 1 776 366 188 2 0 chr17 25125041 25125111 -70147540 + B1_Mus1 SINE Alu 1 71 -79 1 776 318 286 126 26 chr17 25125254 25125444 -70147207 + L1MC1 LINE L1 5858 6066 -267 1 776 1180 49 28 0 chr17 25125444 25125587 -70147064 + B1_Mus2 SINE Alu 1 147 0 1 776 657 285 55 10 chr17 25125994 25126196 -70146455 + B3 SINE B2 1 211 -5 1 776 978 243 152 11 chr17 25128642 25128972 -70143679 + MTD LTR MaLR 25 405 -14 1 776 240 282 98 49 chr17 25128974 25129097 -70143554 + RSINE1 SINE B4 36 164 -1 1 776 220 234 0 0 chr17 25129099 25129146 -70143505 + A-rich Low_complexity Low_complexity 1 47 0 1 776 307 0 0 22 chr17 25129922 25129968 -70142683 - L1_Mus2 LINE L1 0 6566 6522 2 776 675 0 0 0 chr17 25130080 25130155 -70142496 + (GGAA)n Simple_repeat Simple_repeat 2 76 0 2 776 580 176 193 0 chr17 25130165 25130284 -70142367 + B1_Mus2 SINE Alu 6 147 0 2 776 320 338 193 0 chr17 25130286 25130431 -70142220 + L1MEf LINE L1 1480 1652 -4548 2 776 1101 64 43 0 chr17 25131304 25131445 -70141206 + B1_Mus2 SINE Alu 1 147 0 2 776 231 125 0 0 chr17 25132475 25132515 -70140136 + (A)n Simple_repeat Simple_repeat 1 40 0 2 776 1867 189 156 51 chr17 25133656 25134142 -70138509 + RMER15 LTR ERVL 39 575 0 2 776 634 101 294 0 chr17 25135118 25135227 -70137424 - B1_Mus2 SINE Alu -6 141 1 2 776 385 318 216 10 chr17 25135247 25135632 -70137019 + L1MC4a LINE L1 6814 7277 -765 2 776 342 338 63 25 chr17 25135713 25135871 -70136780 - RSINE1 SINE B4 0 165 2 2 776 21 0 0 0 chr17 25135904 25135925 -70136726 + AT_rich Low_complexity Low_complexity 1 21 0 2 776 204 125 0 0 chr17 25136799 25136831 -70135820 + (T)n Simple_repeat Simple_repeat 1 32 0 2 776 1159 75 0 0 chr17 25136831 25136978 -70135673 - B1_Mus1 SINE Alu 0 148 2 2 776 1785 229 46 20 chr17 25137444 25137837 -70134814 + MTD LTR MaLR 5 407 -12 2 776 1426 89 16 0 chr17 25138467 25138657 -70133994 + B2_Mm2 SINE B2 1 193 -2 2 776 180 179 0 0 chr17 25139021 25139060 -70133591 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 776 301 290 34 17 chr17 25139075 25139180 -70133471 - MER58A DNA MER1_type -76 148 45 2 776 1261 41 0 0 chr17 25139283 25139429 -70133222 + B1_Mm SINE Alu 2 147 0 2 776 529 258 16 126 chr17 25139448 25139630 -70133021 + B3 SINE B2 27 191 -25 2 776 357 240 12 56 chr17 25140791 25140885 -70131766 - ID4_ SINE ID -54 98 6 2 776 1307 95 16 10 chr17 25141292 25141484 -70131167 - B2_Mm2 SINE B2 -2 193 1 2 776 325 262 38 0 chr17 25141503 25141583 -70131068 - B1F1 SINE Alu -66 83 1 2 776 345 356 82 43 chr17 25141971 25142176 -70130475 + MER47B DNA MER2_type 98 321 -97 2 776 814 258 5 0 chr17 25142176 25142362 -70130289 - B3A SINE B2 -9 189 3 2 776 345 356 82 43 chr17 25142362 25142461 -70130190 + MER47B DNA MER2_type 322 414 -4 2 776 702 196 58 29 chr17 25142707 25142844 -70129807 + B1_Mur1 SINE Alu 8 148 -1 2 776 251 321 35 35 chr17 25142845 25142961 -70129690 - Charlie5 DNA MER1_type -2507 117 2 2 776 894 45 0 0 chr17 25145212 25145323 -70127328 + (TTTC)n Simple_repeat Simple_repeat 2 112 0 2 776 1382 88 0 6 chr17 25145323 25145505 -70127146 - B2_Mm2 SINE B2 -14 181 1 2 776 1216 68 0 0 chr17 25145528 25145675 -70126976 + B1_Mus1 SINE Alu 1 147 -1 2 776 287 364 8 0 chr17 25145763 25145788 -70126863 + polypurine Low_complexity Low_complexity 3 27 0 2 776 1021 66 72 14 chr17 25145788 25145926 -70126725 + B1_Mm SINE Alu 2 147 0 2 776 287 364 8 0 chr17 25145926 25146021 -70126630 + GA-rich Low_complexity Low_complexity 28 123 0 2 776 400 246 87 10 chr17 25147264 25147377 -70125274 + PB1D9 SINE Alu 1 119 -30 2 776 231 176 137 0 chr17 25147469 25147520 -70125131 + PB1D10 SINE Alu 60 117 0 2 776 180 0 0 0 chr17 25147706 25147726 -70124925 + (TTTTTG)n Simple_repeat Simple_repeat 6 25 0 2 776 696 178 0 52 chr17 25147726 25147862 -70124789 - B1_Mur3 SINE Alu 0 149 21 2 776 789 211 14 0 chr17 25149587 25149734 -70122917 - B1_Mur1 SINE Alu 0 149 1 2 776 395 248 184 0 chr17 25149831 25149940 -70122711 + B1F SINE Alu 21 149 0 2 776 28 0 0 0 chr17 25151059 25151087 -70121564 + GC_rich Low_complexity Low_complexity 1 28 0 2 776 951 138 0 0 chr17 25154630 25154768 -70117883 + B1_Mur3 SINE Alu 12 149 0 2 776 253 324 38 96 chr17 25154636 25154793 -70117858 + B4A SINE B4 103 250 -42 2 776 581 210 78 21 chr17 25154895 25155036 -70117615 - B1_Mur2 SINE Alu 0 149 1 2 776 395 179 130 4 chr17 25155072 25155171 -70117480 - B3A SINE B2 -78 117 2 2 776 887 233 48 5 chr17 25156160 25156367 -70116284 - B3 SINE B2 0 216 1 2 776 382 273 9 18 chr17 25156385 25156497 -70116154 - MLT1C LTR MaLR 0 467 357 2 776 321 241 60 12 chr17 25156630 25156714 -70115937 + B4A SINE B4 140 227 -65 2 776 401 279 152 14 chr17 25156714 25156852 -70115799 + RSINE1 SINE B4 3 159 -6 2 776 674 228 25 96 chr17 25156882 25157034 -70115617 - B3A SINE B2 -13 185 40 2 776 324 0 0 0 chr17 25157034 25157070 -70115581 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 776 1460 51 17 0 chr17 25157070 25157247 -70115404 - B2_Mm2 SINE B2 -15 180 1 2 776 674 228 25 96 chr17 25157247 25157292 -70115359 - B3A SINE B2 -159 39 2 2 776 280 294 28 42 chr17 25157824 25157966 -70114685 - Lx8 LINE L1 0 7473 7334 2 776 1415 80 5 5 chr17 25158025 25158214 -70114437 - B2_Mm1a SINE B2 -4 189 1 2 776 1706 21 0 5 chr17 25158591 25158784 -70113867 - B2_Mm1a SINE B2 0 193 2 2 776 1808 169 54 52 chr17 25158970 25159339 -70113312 - ORR1C2 LTR MaLR -12 372 3 2 776 243 0 0 0 chr17 25159756 25159783 -70112868 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 776 363 273 200 24 chr17 25160014 25160071 -70112580 + ID_B1 SINE B4 28 156 -136 2 776 591 119 211 0 chr17 25160071 25160180 -70112471 + B1_Mus1 SINE Alu 12 143 -5 2 776 363 273 200 24 chr17 25160180 25160226 -70112425 + ID_B1 SINE B4 157 266 -26 2 776 353 234 156 84 chr17 25160227 25160277 -70112374 - FAM SINE Alu 0 311 294 2 776 1091 51 0 0 chr17 25160277 25160409 -70112242 - B1_Mus2 SINE Alu -4 143 12 2 776 621 95 16 65 chr17 25160414 25160538 -70112113 - L1_Mus3 LINE L1 -13 6625 6508 2 776 503 184 65 84 chr17 25160538 25160554 -70112097 - B4A SINE B4 -207 85 68 2 776 216 0 0 0 chr17 25160584 25160608 -70112043 + (TAA)n Simple_repeat Simple_repeat 2 25 0 2 776 189 107 0 0 chr17 25160608 25160636 -70112015 + (TTA)n Simple_repeat Simple_repeat 2 29 0 2 776 264 236 0 0 chr17 25160846 25160901 -70111750 + L1MC3 LINE L1 6901 6955 -830 2 776 1225 54 0 0 chr17 25160911 25161059 -70111592 + B1_Mus1 SINE Alu 1 148 0 2 776 1910 143 118 12 chr17 25161189 25161521 -70111130 - ORR1B2 LTR MaLR 0 367 1 2 776 1119 244 128 89 chr17 25161528 25161997 -70110654 + L1MC3 LINE L1 7155 7661 -124 2 776 318 254 56 0 chr17 25161997 25162068 -70110583 - ID4_ SINE ID -7 76 2 2 776 1119 244 128 89 chr17 25162068 25162202 -70110449 + L1MC3 LINE L1 7662 7781 -4 2 776 362 302 0 49 chr17 25163132 25163254 -70109397 - PB1D10 SINE Alu 0 117 2 2 776 186 156 0 0 chr17 25163307 25163352 -70109299 + T-rich Low_complexity Low_complexity 1 45 0 2 776 742 180 7 41 chr17 25163364 25163509 -70109142 - B1_Mur1 SINE Alu -1 148 9 2 776 327 279 25 0 chr17 25163598 25163677 -70108974 - PB1D7 SINE Alu -33 87 7 2 776 1985 201 40 31 chr17 25163802 25164250 -70108401 - RLTR11B LTR ERVK -1 452 1 2 776 818 152 80 63 chr17 25165098 25165273 -70107378 + B2_Mm2 SINE B2 3 180 -15 2 776 1081 191 58 10 chr17 25165274 25165480 -70107171 + B3 SINE B2 1 216 0 2 777 843 229 114 6 chr17 25166591 25166767 -70105884 - B3 SINE B2 -21 195 1 2 777 258 106 0 0 chr17 25166841 25166888 -70105763 + (T)n Simple_repeat Simple_repeat 1 47 0 2 777 537 259 17 0 chr17 25166925 25167041 -70105610 - ID_B1 SINE B4 -3 221 104 2 777 395 331 34 129 chr17 25167176 25167311 -70105340 - MLT1A LTR MaLR -1 373 243 2 777 432 0 0 0 chr17 25167311 25167359 -70105292 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 2 777 992 131 0 0 chr17 25167359 25167496 -70105155 - B1_Mus1 SINE Alu -10 138 2 2 777 395 331 34 129 chr17 25167496 25167771 -70104880 - MLT1A LTR MaLR -132 242 2 2 777 189 26 79 0 chr17 25167999 25168037 -70104614 + (TTTTA)n Simple_repeat Simple_repeat 5 45 0 2 777 1306 34 0 0 chr17 25168040 25168188 -70104463 - B1_Mus1 SINE Alu 0 148 1 2 777 1290 178 5 0 chr17 25168191 25168399 -70104252 - B3 SINE B2 -3 213 5 2 777 2799 171 4 2 chr17 25168407 25168869 -70103782 - RMER4A LTR ERVK 0 466 4 2 777 269 364 126 9 chr17 25169363 25169474 -70103177 - PB1 SINE Alu -1 126 3 2 777 994 84 0 264 chr17 25169504 25169762 -70102889 + B2_Mm2 SINE B2 2 191 -4 2 777 702 245 7 7 chr17 25170234 25170371 -70102280 + B1_Mur2 SINE Alu 1 138 -11 2 777 666 0 0 0 chr17 25170371 25170445 -70102206 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 2 777 753 173 57 7 chr17 25170454 25170594 -70102057 + B1_Mus1 SINE Alu 2 148 0 2 777 453 196 0 71 chr17 25171120 25171219 -70101432 + PB1D10 SINE Alu 26 117 0 2 777 234 143 35 35 chr17 25171383 25171441 -70101210 - L1MB8 LINE L1 -55 6123 6066 2 777 649 196 18 0 chr17 25171597 25171709 -70100942 + PB1D9 SINE Alu 1 114 -6 2 777 317 24 24 0 chr17 25171715 25171757 -70100894 + (GGGA)n Simple_repeat Simple_repeat 2 44 0 2 777 798 11 0 0 chr17 25171757 25171848 -70100803 + (TAGA)n Simple_repeat Simple_repeat 2 92 0 2 777 231 246 77 0 chr17 25173120 25173185 -70099466 + MER45B DNA Tip100 405 474 -566 2 777 254 272 74 37 chr17 25174395 25174525 -70098126 - MLT1D LTR MaLR -12 493 327 2 777 525 289 111 19 chr17 25174639 25174801 -70097850 + B3 SINE B2 39 215 -1 2 777 246 329 0 12 chr17 25174814 25174894 -70097757 + ID4_ SINE ID 5 83 0 2 777 564 15 0 0 chr17 25175170 25175235 -70097416 + (TG)n Simple_repeat Simple_repeat 1 65 0 2 777 351 127 0 0 chr17 25175235 25175298 -70097353 + (GA)n Simple_repeat Simple_repeat 2 64 0 2 777 674 262 16 79 chr17 25175513 25175739 -70096912 - B4 SINE B4 -12 280 75 3 777 3698 182 58 112 chr17 25176350 25177277 -70095374 + RMER19B LTR ERVK 1 877 -25 3 777 1375 314 97 43 chr17 25178640 25179531 -70093120 + RMER1C Other Other 31 969 -373 3 777 369 160 26 26 chr17 25179559 25179636 -70093015 + RMER1C Other Other 884 960 -382 3 777 373 162 29 0 chr17 25179626 25179694 -70092957 + RMER1C Other Other 891 960 -382 3 777 279 188 0 0 chr17 25179694 25179742 -70092909 + RMER1C Other Other 901 948 -394 3 777 373 162 29 0 chr17 25179742 25179810 -70092841 + RMER1C Other Other 891 960 -382 3 777 373 162 29 0 chr17 25179800 25179868 -70092783 + RMER1C Other Other 891 960 -382 3 777 329 155 35 0 chr17 25179868 25179926 -70092725 + RMER1C Other Other 901 960 -382 3 777 373 162 29 0 chr17 25179916 25179984 -70092667 + RMER1C Other Other 891 960 -382 3 777 373 162 29 0 chr17 25179974 25180042 -70092609 + RMER1C Other Other 891 960 -382 3 777 373 162 29 0 chr17 25180032 25180100 -70092551 + RMER1C Other Other 891 960 -382 3 777 373 162 29 0 chr17 25180090 25180158 -70092493 + RMER1C Other Other 891 960 -382 3 777 373 162 29 0 chr17 25180148 25180216 -70092435 + RMER1C Other Other 891 960 -382 3 777 373 162 29 0 chr17 25180206 25180274 -70092377 + RMER1C Other Other 891 960 -382 3 777 1869 123 47 9 chr17 25180264 25180585 -70092066 + RMER1C Other Other 891 1223 -119 3 777 255 238 0 131 chr17 25180590 25180632 -70092019 + RMER1A Other Other 859 897 -133 3 777 1320 20 0 0 chr17 25180632 25180779 -70091872 - B1_Mm SINE Alu 0 147 1 3 777 926 154 7 7 chr17 25180788 25180932 -70091719 - B1_Mur4 SINE Alu -5 145 2 3 777 696 127 0 82 chr17 25180932 25181078 -70091573 + RMER1C Other Other 1208 1341 -1 3 777 982 148 0 0 chr17 25182859 25183001 -70089650 - B1_Mus2 SINE Alu -2 145 4 3 777 971 46 114 8 chr17 25183163 25183295 -70089356 + B1_Mus1 SINE Alu 3 148 0 3 777 215 139 0 27 chr17 25183334 25183371 -70089280 + GA-rich Low_complexity Low_complexity 3 38 0 3 777 905 209 51 0 chr17 25183626 25183803 -70088848 + B3 SINE B2 1 186 -30 3 777 1753 16 0 0 chr17 25184005 25184198 -70088453 + B2_Mm1a SINE B2 1 193 0 3 777 243 306 28 0 chr17 25184418 25184490 -70088161 - L1MB5 LINE L1 -27 6147 6074 3 777 285 252 146 15 chr17 25184513 25184650 -70088001 - L1MB5 LINE L1 -188 5986 5832 3 777 539 233 129 0 chr17 25184963 25185079 -70087572 + B1_Mur1 SINE Alu 2 132 -17 3 777 244 264 14 0 chr17 25186135 25186207 -70086444 - ID2 SINE ID -9 74 2 3 777 255 288 0 17 chr17 25186899 25186959 -70085692 - B1F1 SINE Alu -86 63 5 3 777 1248 124 5 35 chr17 25187596 25187796 -70084855 - B2_Mm2 SINE B2 0 195 2 3 777 2989 67 26 3 chr17 25187949 25188339 -70084312 - L1Md_F2 LINE L1 -12 6570 6172 3 777 485 302 103 26 chr17 25189741 25189935 -70082716 - B3A SINE B2 -1 194 1 3 777 382 259 9 35 chr17 25189968 25190080 -70082571 - PB1D10 SINE Alu -15 102 1 3 777 315 0 0 0 chr17 25191687 25191722 -70080929 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 777 184 393 21 35 chr17 25191740 25191885 -70080766 + L2b LINE L2 3032 3174 -201 3 777 759 240 125 0 chr17 25192793 25192985 -70079666 - B3 SINE B2 0 216 1 3 777 726 236 14 0 chr17 25193180 25193324 -70079327 + B1F SINE Alu 3 148 -1 3 777 665 195 0 0 chr17 25193463 25193576 -70079075 + B1_Mur2 SINE Alu 4 116 -33 3 777 314 259 16 5 chr17 25196123 25196228 -70076423 - PB1D7 SINE Alu -9 140 32 3 777 462 206 115 53 chr17 25197025 25197138 -70075513 + B1_Mur3 SINE Alu 5 124 -25 3 777 300 260 66 159 chr17 25197031 25197182 -70075469 + MT2B LTR ERVL 175 311 -290 3 777 181 135 19 19 chr17 25197342 25197395 -70075256 + T-rich Low_complexity Low_complexity 2 54 0 3 777 739 152 17 0 chr17 25197397 25197515 -70075136 - PB1D9 SINE Alu 0 120 1 3 777 661 294 6 6 chr17 25197746 25197907 -70074744 + B3A SINE B2 1 161 -37 3 777 21 0 0 0 chr17 25197928 25197949 -70074702 + AT_rich Low_complexity Low_complexity 1 21 0 3 777 1058 44 73 0 chr17 25197962 25198099 -70074552 + B1_Mus1 SINE Alu 2 148 0 3 777 751 176 73 0 chr17 25199225 25199361 -70073290 - B1_Mus1 SINE Alu -2 146 1 3 777 736 271 46 95 chr17 25199729 25199817 -70072834 + B4A SINE B4 2 90 -202 3 777 180 0 0 0 chr17 25199817 25199837 -70072814 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3 777 989 113 7 7 chr17 25199838 25199981 -70072670 + B1_Mur4 SINE Alu 5 147 -3 3 777 429 20 0 0 chr17 25199981 25200031 -70072620 + (TGAA)n Simple_repeat Simple_repeat 3 52 0 3 777 736 271 46 95 chr17 25200031 25200245 -70072406 + B4A SINE B4 91 291 -1 3 777 514 191 38 0 chr17 25200585 25200690 -70071961 + PB1D10 SINE Alu 9 117 0 3 777 294 248 256 0 chr17 25200690 25200702 -70071949 + B4A SINE B4 94 240 -52 3 777 815 162 80 7 chr17 25202228 25202365 -70070286 - B1_Mur1 SINE Alu -1 148 2 3 777 474 18 0 0 chr17 25202542 25202597 -70070054 + (CATA)n Simple_repeat Simple_repeat 1 55 0 3 777 311 152 0 0 chr17 25203322 25203368 -70069283 + B1F SINE Alu 81 126 -23 3 777 251 320 26 0 chr17 25203382 25203460 -70069191 + ID4_ SINE ID 4 83 0 3 777 424 302 32 142 chr17 25205077 25205193 -70067458 - MT2B LTR ERVL -203 398 214 3 777 788 225 0 7 chr17 25205193 25205332 -70067319 - B1_Mur1 SINE Alu -10 139 2 3 777 424 302 32 142 chr17 25205332 25205386 -70067265 - MT2B LTR ERVL -203 213 124 3 777 849 199 14 7 chr17 25206403 25206550 -70066101 + B1_Mur1 SINE Alu 1 148 -1 3 777 770 278 87 11 chr17 25207673 25207939 -70064712 - B4A SINE B4 -6 286 1 3 777 425 352 0 25 chr17 25210375 25210538 -70062113 + RSINE1 SINE B4 2 160 -5 3 777 814 43 8 17 chr17 25210573 25210692 -70061959 + L1_Mus2 LINE L1 6448 6565 -1 3 777 573 176 0 0 chr17 25211241 25211349 -70061302 + (TA)n Simple_repeat Simple_repeat 2 109 0 3 777 614 277 134 16 chr17 25211394 25211647 -70061004 - B4A SINE B4 -7 285 3 3 777 1023 198 38 10 chr17 25211688 25211897 -70060754 - B3 SINE B2 0 216 2 3 777 938 153 0 0 chr17 25211973 25212110 -70060541 - B1_Mus2 SINE Alu 0 147 11 3 777 544 246 30 121 chr17 25212008 25212119 -70060532 - MT2B LTR ERVL -337 264 170 3 777 279 0 0 0 chr17 25212119 25212150 -70060501 + (TATG)n Simple_repeat Simple_repeat 2 32 0 3 777 544 246 30 121 chr17 25212150 25212269 -70060382 - MT2B LTR ERVL -432 169 55 3 777 1065 166 165 4 chr17 25212271 25212531 -70060120 - RCHARR1 DNA MER1_type -22 952 651 3 777 663 234 8 0 chr17 25212595 25212723 -70059928 - RSINE1 SINE B4 -35 130 2 3 777 31 0 0 0 chr17 25212725 25212756 -70059895 + AT_rich Low_complexity Low_complexity 1 31 0 3 777 340 157 0 0 chr17 25212786 25212837 -70059814 - B3 SINE B2 -94 122 72 3 777 345 281 11 22 chr17 25212839 25212930 -70059721 - RCHARR1 DNA MER1_type -347 627 538 3 777 702 223 14 1 chr17 25212951 25213096 -70059555 + B1_Mur1 SINE Alu 4 148 -1 3 777 1444 279 47 60 chr17 25213102 25213587 -70059064 - RCHARR1 DNA MER1_type -493 481 3 3 777 278 180 0 20 chr17 25215514 25215565 -70057086 - B1F SINE Alu 0 149 100 3 777 223 228 35 81 chr17 25218115 25218201 -70054450 - L4 LINE RTE -1340 689 608 3 777 297 0 0 0 chr17 25218452 25218485 -70054166 + (TCCA)n Simple_repeat Simple_repeat 4 36 0 3 777 1265 137 6 0 chr17 25218528 25218711 -70053940 + URR1B DNA MER1_type 1 184 -41 3 777 225 0 0 0 chr17 25220337 25220362 -70052289 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 777 846 158 43 7 chr17 25221350 25221490 -70051161 - B1_Mur2 SINE Alu 0 149 5 3 777 186 289 65 163 chr17 25221632 25221785 -70050866 - L2 LINE L2 -3279 140 3 3 777 549 0 0 0 chr17 25222905 25222966 -70049685 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 777 639 39 0 0 chr17 25225943 25226021 -70046630 + (TG)n Simple_repeat Simple_repeat 2 79 0 3 777 466 300 54 27 chr17 25226054 25226239 -70046412 + B3A SINE B2 1 190 -8 3 777 1250 48 0 0 chr17 25226968 25227115 -70045536 + B1_Mus1 SINE Alu 2 148 0 3 777 1128 88 0 0 chr17 25228104 25228251 -70044400 + B1_Mus1 SINE Alu 2 148 0 3 777 227 332 135 14 chr17 25228393 25228601 -70044050 - RLTR21 LTR ERVK -265 1307 1075 3 777 375 241 165 9 chr17 25228644 25228753 -70043898 - PB1 SINE Alu 0 127 2 3 777 368 248 52 44 chr17 25228802 25228937 -70043714 - B1F SINE Alu 0 149 14 3 777 1481 177 83 15 chr17 25230438 25230777 -70041874 - ORR1D1 LTR MaLR -12 362 1 3 777 1026 185 267 3 chr17 25231816 25232061 -70040590 - MTD LTR MaLR 0 419 105 3 777 783 246 37 42 chr17 25232061 25232277 -70040374 + B3 SINE B2 2 216 0 3 777 1026 185 267 3 chr17 25232277 25232357 -70040294 - MTD LTR MaLR -315 104 9 3 777 662 251 133 5 chr17 25232421 25232617 -70040034 - ID_B1 SINE B4 -1 223 3 3 777 362 286 0 62 chr17 25233541 25233638 -70039013 + B1F1 SINE Alu 1 91 -56 3 777 1026 209 43 17 chr17 25233964 25234198 -70038453 - RMER17B LTR ERVK -84 874 635 3 777 2415 116 17 25 chr17 25234192 25234292 -70038359 - RMER17B LTR ERVK -553 405 302 3 777 1160 49 28 0 chr17 25234292 25234434 -70038217 + B1_Mus1 SINE Alu 2 147 -1 3 777 600 14 0 0 chr17 25234436 25234505 -70038146 + (GA)n Simple_repeat Simple_repeat 1 69 0 3 777 2415 116 17 25 chr17 25234505 25234809 -70037842 - RMER17B LTR ERVK -657 301 2 3 777 1123 241 68 38 chr17 25234869 25235232 -70037419 + Lx6 LINE L1 6708 7433 -27 3 777 24 53 0 0 chr17 25237595 25237633 -70035018 + AT_rich Low_complexity Low_complexity 1 38 0 3 777 447 18 0 0 chr17 25237648 25237703 -70034948 - B2_Mm2 SINE B2 -94 101 47 3 777 1204 83 65 0 chr17 25237716 25237884 -70034767 - B2_Mm1t SINE B2 -14 179 1 3 777 632 225 72 0 chr17 25237889 25238027 -70034624 - B1_Mur1 SINE Alu -1 148 1 3 777 1318 105 10 26 chr17 25240021 25240216 -70032435 - B2_Mm2 SINE B2 -1 194 3 3 777 678 181 97 0 chr17 25240353 25240508 -70032143 + URR1A DNA MER1_type 17 186 -40 3 777 341 239 335 0 chr17 25240741 25240902 -70031749 + B3A SINE B2 2 216 0 3 777 537 295 30 12 chr17 25241109 25241277 -70031374 + B3A SINE B2 22 192 -6 3 777 333 0 0 0 chr17 25241313 25241350 -70031301 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 777 621 0 0 0 chr17 25244680 25244749 -70027902 + (TG)n Simple_repeat Simple_repeat 1 69 0 3 777 180 0 0 0 chr17 25244749 25244768 -70027883 + (CG)n Simple_repeat Simple_repeat 2 21 0 3 777 404 336 0 16 chr17 25244781 25244902 -70027749 - B3A SINE B2 -73 125 7 3 777 290 262 107 0 chr17 25244910 25245013 -70027638 - PB1D7 SINE Alu -4 116 3 3 777 542 296 34 85 chr17 25245280 25245352 -70027299 - B4 SINE B4 0 292 125 3 777 557 167 19 29 chr17 25245352 25245457 -70027194 - B1_Mur2 SINE Alu -6 143 40 4 777 272 264 0 27 chr17 25245394 25245468 -70027183 - MT2B LTR ERVL -344 257 186 4 777 1202 189 117 39 chr17 25245468 25245777 -70026874 + ORR1D1 LTR MaLR 11 343 -31 4 777 1022 157 0 0 chr17 25245786 25245933 -70026718 - B1_Mur3 SINE Alu -2 147 1 4 777 702 333 39 5 chr17 25245935 25246143 -70026508 - B4A SINE B4 -77 215 1 4 777 1132 78 0 0 chr17 25246938 25247080 -70025571 - B1_Mus2 SINE Alu -5 142 1 4 777 763 210 22 0 chr17 25248335 25248473 -70024178 + B1_Mus1 SINE Alu 1 141 -7 4 777 423 216 232 74 chr17 25250292 25250356 -70022295 + B4 SINE B4 3 220 -70 4 777 670 153 89 0 chr17 25250356 25250480 -70022171 + B1_Mur3 SINE Alu 9 143 -6 4 777 509 234 85 15 chr17 25250507 25250637 -70022014 + B1F2 SINE Alu 1 139 -10 4 777 504 321 0 0 chr17 25250646 25250805 -70021846 + B4 SINE B4 66 224 -68 4 777 246 215 47 26 chr17 25250820 25250903 -70021748 + B1F2 SINE Alu 34 120 0 4 777 186 43 0 0 chr17 25251082 25251105 -70021546 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 4 777 999 177 89 20 chr17 25251106 25251308 -70021343 - B3 SINE B2 0 216 1 4 777 1199 35 7 0 chr17 25251449 25251590 -70021061 + B1_Mus1 SINE Alu 1 142 -6 4 777 219 36 0 0 chr17 25251593 25251621 -70021030 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 4 777 319 237 13 13 chr17 25253525 25253602 -70019049 + B3A SINE B2 1 77 -121 4 777 1341 89 0 43 chr17 25254789 25254977 -70017674 + B2_Mm2 SINE B2 2 181 -14 4 777 515 275 0 42 chr17 25254984 25255128 -70017523 + RSINE1 SINE B4 26 163 -2 4 777 446 290 53 8 chr17 25255173 25255305 -70017346 + B4A SINE B4 1 138 -154 4 777 425 347 26 26 chr17 25255285 25255480 -70017171 - RMER15 LTR ERVL -18 557 363 4 777 21 0 0 0 chr17 25255934 25255955 -70016696 + AT_rich Low_complexity Low_complexity 1 21 0 4 777 334 242 45 88 chr17 25256605 25256761 -70015890 - MLT1B LTR MaLR -32 358 259 4 777 582 15 0 0 chr17 25257086 25257153 -70015498 + (GA)n Simple_repeat Simple_repeat 1 67 0 4 777 357 232 98 29 chr17 25257156 25257258 -70015393 + PB1 SINE Alu 19 127 0 4 777 474 18 0 0 chr17 25258140 25258195 -70014456 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 777 628 237 22 22 chr17 25258398 25258536 -70014115 + B1F SINE Alu 1 138 -11 4 777 222 37 0 0 chr17 25258536 25258563 -70014088 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 777 864 220 129 0 chr17 25258584 25258770 -70013881 + B3 SINE B2 2 211 -5 4 777 241 305 0 53 chr17 25258818 25258908 -70013743 + ID4_ SINE ID 12 97 -55 4 777 776 222 134 5 chr17 25258936 25259122 -70013529 + B3 SINE B2 2 211 -5 4 777 520 191 9 0 chr17 25259136 25259241 -70013410 - B1_Mur3 SINE Alu -2 147 42 4 777 216 0 0 0 chr17 25262213 25262237 -70010414 + (A)n Simple_repeat Simple_repeat 1 24 0 4 777 1122 64 43 0 chr17 25262238 25262378 -70010273 + B1_Mus2 SINE Alu 1 146 -1 4 777 894 45 0 0 chr17 25262378 25262489 -70010162 + (GGAGAA)n Simple_repeat Simple_repeat 5 115 0 4 777 313 304 0 0 chr17 25262519 25262588 -70010063 + (CTG)n Simple_repeat Simple_repeat 1 69 0 4 777 423 308 74 15 chr17 25262732 25262867 -70009784 - B1F1 SINE Alu -2 147 5 4 777 1117 82 0 27 chr17 25262890 25262902 -70009749 - B1_Mus1 SINE Alu -1 147 139 4 777 266 0 0 29 chr17 25262902 25262937 -70009714 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 777 1117 82 0 27 chr17 25262937 25263074 -70009577 - B1_Mus1 SINE Alu -10 138 2 4 777 302 281 83 0 chr17 25263504 25263600 -70009051 - L1MB7 LINE L1 -23 6161 6058 4 777 1054 95 7 13 chr17 25263623 25263772 -70008879 - B1_Mus1 SINE Alu 0 148 1 4 777 291 76 44 29 chr17 25263782 25263850 -70008801 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 4 777 505 190 80 0 chr17 25263873 25263973 -70008678 + B1_Mur2 SINE Alu 36 143 -6 4 777 201 154 0 0 chr17 25263980 25264019 -70008632 + GA-rich Low_complexity Low_complexity 2 40 0 4 777 225 0 0 0 chr17 25264451 25264476 -70008175 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 777 1048 108 0 0 chr17 25264476 25264615 -70008036 - B1_Mus1 SINE Alu -9 139 1 4 777 887 188 0 0 chr17 25264865 25265009 -70007642 - B1_Mus2 SINE Alu -2 145 2 4 777 248 393 0 9 chr17 25265198 25265311 -70007340 - PB1D10 SINE Alu -1 116 5 4 777 1002 196 77 10 chr17 25265340 25265536 -70007115 + B3 SINE B2 5 213 -3 4 777 669 198 231 0 chr17 25265744 25265926 -70006725 - ID_B1 SINE B4 0 224 1 4 777 810 143 23 0 chr17 25265939 25266072 -70006579 - B1_Mur3 SINE Alu -7 142 7 4 777 411 304 45 65 chr17 25266072 25266089 -70006562 - B4 SINE B4 -68 219 73 4 777 1224 61 0 0 chr17 25266107 25266254 -70006397 - B1_Mus2 SINE Alu 0 147 1 4 777 1240 112 17 11 chr17 25267147 25267327 -70005324 - B2_Mm2 SINE B2 -14 181 1 4 777 228 351 0 0 chr17 25267489 25267546 -70005105 + tRNA-Ala-GCA tRNA tRNA 10 66 -9 4 777 1111 88 0 0 chr17 25267872 25268008 -70004643 - B1_Mus1 SINE Alu -12 136 1 4 777 342 0 0 0 chr17 25268184 25268222 -70004429 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 777 283 183 12 12 chr17 25268424 25268507 -70004144 + (TA)n Simple_repeat Simple_repeat 2 84 0 4 777 353 242 38 61 chr17 25269068 25269200 -70003451 - RLTR13D3 LTR ERVK -42 1072 944 4 777 240 132 0 0 chr17 25269455 25269493 -70003158 - B2_Mm2 SINE B2 -157 38 1 4 777 486 229 17 52 chr17 25271738 25271853 -70000798 + B3A SINE B2 35 145 -53 4 777 405 0 0 0 chr17 25271868 25271913 -70000738 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 777 1079 54 0 109 chr17 25272117 25272282 -70000369 - B1_Mus2 SINE Alu 0 147 1 4 777 678 265 111 0 chr17 25272873 25273054 -69999597 + ID_B1 SINE B4 24 224 0 4 777 248 212 149 15 chr17 25274280 25274347 -69998304 + PB1D9 SINE Alu 42 117 -3 4 777 210 171 0 0 chr17 25274478 25274519 -69998132 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 777 585 267 93 0 chr17 25274762 25274912 -69997739 - RSINE1 SINE B4 0 165 2 4 777 1620 0 0 0 chr17 25274937 25275297 -69997354 + (TTCCC)n Simple_repeat Simple_repeat 1 360 0 4 777 240 35 0 0 chr17 25275297 25275326 -69997325 + (TC)n Simple_repeat Simple_repeat 1 29 0 4 777 1423 78 0 77 chr17 25275326 25275535 -69997116 - B2_Mm2 SINE B2 0 195 3 4 777 414 0 0 0 chr17 25275559 25275605 -69997046 + (TTTA)n Simple_repeat Simple_repeat 4 49 0 4 777 926 107 0 28 chr17 25275716 25275860 -69996791 - B1_Mus2 SINE Alu 0 147 8 4 777 441 297 37 119 chr17 25275721 25275939 -69996712 - B4 SINE B4 -69 223 24 4 777 278 226 32 0 chr17 25276073 25276135 -69996516 - B1_Mur1 SINE Alu -12 137 74 4 777 907 202 17 6 chr17 25276131 25276305 -69996346 - B3 SINE B2 -31 185 10 4 777 708 248 26 7 chr17 25276311 25276465 -69996186 - ID_B1 SINE B4 -67 157 1 4 777 282 211 104 13 chr17 25276468 25276545 -69996106 - L1MB4 LINE L1 -274 5906 5823 4 777 216 97 0 0 chr17 25276844 25276875 -69995776 + (T)n Simple_repeat Simple_repeat 1 31 0 4 777 626 227 204 10 chr17 25276890 25277086 -69995565 - B4A SINE B4 -58 234 1 4 777 715 144 126 22 chr17 25278329 25278464 -69994187 + B1_Mur4 SINE Alu 2 150 0 4 777 1133 115 0 0 chr17 25278483 25278631 -69994020 + B1_Mus1 SINE Alu 1 148 0 4 777 320 231 176 17 chr17 25278660 25278779 -69993872 + MLT1C LTR MaLR 1 138 -329 4 777 760 237 49 20 chr17 25278890 25279077 -69993574 - B3 SINE B2 0 216 36 4 777 227 210 21 168 chr17 25280287 25280430 -69992221 + B3 SINE B2 68 214 -2 4 777 1088 84 7 0 chr17 25280437 25280579 -69992072 + B1_Mus2 SINE Alu 3 145 -2 4 777 567 153 0 0 chr17 25280581 25280679 -69991972 + (TGG)n Simple_repeat Simple_repeat 3 100 0 4 777 456 320 97 18 chr17 25281579 25281738 -69990913 + B3A SINE B2 40 210 -6 4 777 385 286 84 14 chr17 25281832 25281974 -69990677 - B3A SINE B2 -46 152 1 4 777 427 278 0 0 chr17 25282101 25282198 -69990453 - PB1D10 SINE Alu -20 97 1 4 777 568 130 11 0 chr17 25282255 25282347 -69990304 - B1_Mus2 SINE Alu 0 147 55 4 777 319 182 31 83 chr17 25282281 25282377 -69990274 - MT2B LTR ERVL -323 278 188 4 777 445 259 28 9 chr17 25286598 25286707 -69985944 - PB1D10 SINE Alu -6 111 1 4 777 189 107 0 0 chr17 25288451 25288479 -69984172 + (CAACC)n Simple_repeat Simple_repeat 3 30 0 4 777 351 261 119 31 chr17 25291203 25291459 -69981192 - MTD LTR MaLR -39 380 1 4 777 1112 88 7 0 chr17 25292765 25292913 -69979738 + B1_Mur4 SINE Alu 2 150 0 4 777 28 0 0 0 chr17 25292928 25292956 -69979695 + AT_rich Low_complexity Low_complexity 1 28 0 4 777 251 341 127 17 chr17 25293118 25293410 -69979241 - L1MB5 LINE L1 -47 6127 5804 4 777 1239 61 0 0 chr17 25294988 25295135 -69977516 - B1_Mus2 SINE Alu 0 147 1 4 777 762 228 85 20 chr17 25295234 25295435 -69977216 - B3 SINE B2 -1 215 2 4 777 776 124 0 18 chr17 25295546 25295690 -69976961 - RMER17B LTR ERVK -498 460 320 4 777 1322 91 27 0 chr17 25295690 25295877 -69976774 + B2_Mm1t SINE B2 2 193 0 5 777 776 168 7 48 chr17 25295877 25295961 -69976690 - RMER17B LTR ERVK -528 378 293 4 778 457 270 80 80 chr17 25298889 25299090 -69973561 + Charlie5 DNA MER1_type 2387 2587 -37 5 778 327 104 0 0 chr17 25300786 25300834 -69971817 + (GA)n Simple_repeat Simple_repeat 2 49 0 5 778 637 224 67 0 chr17 25302023 25302157 -69970494 + B1_Mus1 SINE Alu 6 148 0 5 778 341 149 15 0 chr17 25302158 25302225 -69970426 + (TAGG)n Simple_repeat Simple_repeat 1 68 0 5 778 354 273 161 7 chr17 25302565 25302720 -69969931 + MER58A DNA MER1_type 40 218 -6 5 778 379 272 16 19 chr17 25302720 25302869 -69969782 + ID_B1 SINE B4 2 222 -2 5 778 258 172 54 91 chr17 25303048 25303136 -69969515 - B1F SINE Alu -52 97 12 5 778 425 244 78 16 chr17 25303158 25303287 -69969364 - RMER15 LTR ERVL -18 557 421 5 778 1089 58 0 7 chr17 25303793 25303931 -69968720 - B1_Mus2 SINE Alu -9 138 2 5 778 950 146 202 0 chr17 25304410 25304588 -69968063 + B3 SINE B2 2 215 -1 5 778 675 197 7 47 chr17 25305782 25305931 -69966720 + B1_Mur3 SINE Alu 1 143 -6 5 778 768 270 21 5 chr17 25306025 25306215 -69966436 - B3A SINE B2 -4 194 2 5 778 327 138 134 30 chr17 25306236 25306303 -69966348 - B1F SINE Alu -2 147 74 5 778 277 311 114 19 chr17 25306493 25306675 -69965976 - L1M5 LINE L1 -266 5898 5696 5 778 1465 74 11 0 chr17 25307296 25307486 -69965165 - B2_Mm1t SINE B2 -1 192 1 5 778 572 0 15 0 chr17 25309575 25309643 -69963008 + (TC)n Simple_repeat Simple_repeat 1 69 0 5 778 229 298 11 97 chr17 25310538 25310631 -69962020 - LTR81C LTR ERV1? -235 918 834 5 778 206 206 0 0 chr17 25311244 25311278 -69961373 + polypyrimidine Low_complexity Low_complexity 3 36 0 5 778 297 0 0 0 chr17 25311282 25311315 -69961336 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 5 778 1270 32 0 0 chr17 25311374 25311532 -69961119 + B2_Mm1t SINE B2 1 158 -35 5 778 504 0 0 0 chr17 25311532 25311588 -69961063 + (TAAA)n Simple_repeat Simple_repeat 1 56 0 5 778 396 262 0 0 chr17 25311593 25311673 -69960978 - PB1D9 SINE Alu -38 82 3 5 778 511 187 84 169 chr17 25311707 25311861 -69960790 + B1_Mus2 SINE Alu 1 141 -6 5 778 419 66 53 0 chr17 25311870 25311946 -69960705 + (GA)n Simple_repeat Simple_repeat 2 81 0 5 778 256 281 130 46 chr17 25313334 25313442 -69959209 - PB1D10 SINE Alu 0 117 1 5 778 672 245 59 54 chr17 25314171 25314374 -69958277 + ID_B1 SINE B4 2 205 -19 5 778 221 0 0 33 chr17 25314383 25314413 -69958238 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 778 452 309 68 54 chr17 25315341 25315563 -69957088 + MLT1D LTR MaLR 194 418 -87 5 778 401 275 98 8 chr17 25315777 25315909 -69956742 + B4 SINE B4 83 226 -66 5 778 673 202 8 0 chr17 25315912 25316036 -69956615 + B1_Mur2 SINE Alu 2 126 -23 5 778 483 18 0 0 chr17 25316058 25316114 -69956537 + (CATA)n Simple_repeat Simple_repeat 3 58 0 5 778 1224 41 0 13 chr17 25316615 25316764 -69955887 + B1_Mm SINE Alu 1 147 0 5 778 218 78 44 59 chr17 25316766 25316834 -69955817 + A-rich Low_complexity Low_complexity 2 68 0 5 778 252 224 52 0 chr17 25317791 25317849 -69954802 - MLT1C LTR MaLR 0 467 407 5 778 710 239 84 30 chr17 25317857 25318027 -69954624 + B3 SINE B2 3 183 -33 5 778 292 43 43 0 chr17 25318027 25318073 -69954578 + (CATA)n Simple_repeat Simple_repeat 4 51 0 5 778 710 239 84 30 chr17 25318073 25318105 -69954546 + B3 SINE B2 184 216 0 5 778 200 94 0 30 chr17 25318106 25318139 -69954512 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 5 778 1195 55 14 0 chr17 25318139 25318284 -69954367 - B1_Mus2 SINE Alu 0 147 1 5 778 938 138 14 14 chr17 25318287 25318434 -69954217 - B1_Mus1 SINE Alu -1 147 1 5 778 654 177 186 0 chr17 25318436 25318560 -69954091 - B1_Mus1 SINE Alu -1 147 1 5 778 195 100 0 0 chr17 25318679 25318709 -69953942 + (G)n Simple_repeat Simple_repeat 1 30 0 5 778 345 225 0 0 chr17 25318949 25319038 -69953613 + (TG)n Simple_repeat Simple_repeat 1 89 0 5 778 810 262 54 65 chr17 25319040 25319334 -69953317 - B4 SINE B4 0 292 2 5 778 180 0 0 0 chr17 25320736 25320756 -69951895 + (T)n Simple_repeat Simple_repeat 1 20 0 5 778 227 240 0 0 chr17 25320799 25320849 -69951802 - B4A SINE B4 -141 151 102 5 778 431 236 19 9 chr17 25322524 25322631 -69950020 - B1_Mur1 SINE Alu 0 149 42 5 778 336 299 0 40 chr17 25322691 25322792 -69949859 + ID_B1 SINE B4 80 176 -48 5 778 525 239 0 9 chr17 25322705 25322815 -69949836 + PB1D10 SINE Alu 9 117 0 5 778 267 319 35 87 chr17 25323084 25323107 -69949544 - B4A SINE B4 -45 247 151 5 778 671 217 0 7 chr17 25323107 25323246 -69949405 - B1_Mus2 SINE Alu 0 147 10 5 778 308 223 9 105 chr17 25323152 25323257 -69949394 - MT2B LTR ERVL -344 257 163 5 778 267 319 35 87 chr17 25323257 25323275 -69949376 - B4A SINE B4 -45 150 64 5 778 27 0 0 0 chr17 25323313 25323340 -69949311 + AT_rich Low_complexity Low_complexity 1 27 0 5 778 876 226 39 6 chr17 25323583 25323765 -69948886 - B3 SINE B2 -28 188 1 5 778 477 50 0 0 chr17 25324048 25324108 -69948543 + (TC)n Simple_repeat Simple_repeat 1 60 0 5 778 25 90 0 0 chr17 25325266 25325333 -69947318 + GC_rich Low_complexity Low_complexity 1 67 0 5 778 31 0 0 0 chr17 25325532 25325563 -69947088 + GC_rich Low_complexity Low_complexity 1 31 0 5 778 324 0 0 0 chr17 25326268 25326304 -69946347 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 778 737 191 14 7 chr17 25326707 25326849 -69945802 - B1_Mur2 SINE Alu 0 149 7 5 778 646 271 83 22 chr17 25327543 25327724 -69944927 - B4 SINE B4 -20 272 81 5 778 316 294 12 0 chr17 25327749 25327834 -69944817 - B4 SINE B4 -206 86 1 5 778 914 101 47 0 chr17 25328035 25328164 -69944487 - B1_Mus1 SINE Alu -13 135 1 5 778 550 301 0 0 chr17 25328201 25328324 -69944327 - B3A SINE B2 -75 123 1 5 778 332 372 25 105 chr17 25328432 25328594 -69944057 + RSINE1 SINE B4 3 151 -14 5 778 370 287 57 29 chr17 25328642 25328663 -69943988 - ID_B1 SINE B4 -2 222 135 5 778 638 159 9 9 chr17 25328663 25328771 -69943880 - B1_Mur2 SINE Alu -31 118 11 5 778 370 287 57 29 chr17 25328771 25328782 -69943869 - ID_B1 SINE B4 -2 134 79 5 778 884 234 55 10 chr17 25329033 25329232 -69943419 + B3 SINE B2 4 211 -5 5 778 1310 170 109 53 chr17 25330199 25330503 -69942148 - ORR1A4 LTR MaLR -8 321 1 5 778 209 111 0 43 chr17 25330878 25330925 -69941726 + (TCTCTG)n Simple_repeat Simple_repeat 1 45 0 5 778 551 209 43 60 chr17 25330925 25331042 -69941609 - PB1D9 SINE Alu -3 117 3 5 778 298 322 35 9 chr17 25331421 25331537 -69941114 - PB1D7 SINE Alu -1 119 1 5 778 2097 149 36 6 chr17 25331705 25332069 -69940582 - ORR1C1 LTR MaLR 0 378 4 5 778 925 137 10 14 chr17 25332105 25332395 -69940256 + CT-rich Low_complexity Low_complexity 1 289 0 5 778 648 247 212 6 chr17 25332419 25332598 -69940053 - B3 SINE B2 0 216 1 5 778 507 33 0 0 chr17 25332604 25332665 -69939986 + (TCCCC)n Simple_repeat Simple_repeat 5 65 0 5 778 462 79 0 0 chr17 25332666 25332729 -69939922 + (TC)n Simple_repeat Simple_repeat 2 64 0 5 778 879 176 0 7 chr17 25332756 25332905 -69939746 - B1_Mus1 SINE Alu 0 148 1 5 778 740 186 0 0 chr17 25333036 25333064 -69939587 + B1_Mur2 SINE Alu 9 137 -12 5 778 338 229 23 76 chr17 25333064 25333165 -69939486 + MT2B LTR ERVL 194 288 -313 5 778 231 36 0 0 chr17 25333165 25333193 -69939458 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 5 778 338 229 23 76 chr17 25333193 25333223 -69939428 + MT2B LTR ERVL 289 318 -283 5 778 474 18 0 0 chr17 25333239 25333294 -69939357 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 5 778 240 233 135 14 chr17 25333868 25333942 -69938709 - B1_Mus1 SINE Alu -48 100 18 5 778 643 232 29 0 chr17 25334719 25334857 -69937794 + B1_Mur1 SINE Alu 2 143 -6 5 778 53 49 0 0 chr17 25334974 25335055 -69937596 + AT_rich Low_complexity Low_complexity 1 81 0 5 778 302 262 68 93 chr17 25335061 25335179 -69937472 + PB1D10 SINE Alu 2 116 -1 5 778 314 277 22 58 chr17 25335379 25335517 -69937134 + BC1_Mm scRNA scRNA 2 134 -18 5 778 398 250 60 43 chr17 25335516 25335530 -69937121 + B4 SINE B4 70 187 -104 5 778 583 122 10 39 chr17 25335530 25335632 -69937019 + B1_Mur4 SINE Alu 1 99 -51 5 778 953 230 99 107 chr17 25335715 25335923 -69936728 - MTD LTR MaLR 0 419 209 5 778 582 168 191 8 chr17 25335923 25336049 -69936602 - B1_Mur4 SINE Alu -1 149 1 5 778 953 230 99 107 chr17 25336049 25336195 -69936456 - MTD LTR MaLR -211 208 68 5 778 649 82 10 0 chr17 25336230 25336327 -69936324 - B2_Mm1t SINE B2 0 193 96 5 778 465 307 43 6 chr17 25336982 25337146 -69935505 - ID_B1 SINE B4 -45 179 10 5 778 731 201 7 0 chr17 25337232 25337371 -69935280 - URR1B DNA MER1_type 0 225 86 5 778 334 282 14 114 chr17 25337444 25337584 -69935067 + B1F SINE Alu 15 140 -9 5 778 198 0 0 0 chr17 25337584 25337606 -69935045 + (CAGA)n Simple_repeat Simple_repeat 2 23 0 5 778 625 203 30 30 chr17 25337606 25337738 -69934913 + B1_Mur2 SINE Alu 5 136 -13 5 778 181 270 79 0 chr17 25338257 25338320 -69934331 - MIRm SINE MIR -180 96 29 5 778 432 298 39 19 chr17 25338523 25338677 -69933974 - L1MB5 LINE L1 -28 6146 5990 5 778 956 162 14 0 chr17 25338714 25338862 -69933789 - B1_Mur4 SINE Alu 0 150 1 5 778 520 207 72 0 chr17 25339466 25339577 -69933074 - PB1D9 SINE Alu 0 120 2 5 778 966 176 0 0 chr17 25339612 25339760 -69932891 - B1_Mur2 SINE Alu 0 149 2 5 778 408 274 29 10 chr17 25339778 25339881 -69932770 + PB1D10 SINE Alu 2 106 -11 6 778 343 307 44 59 chr17 25339904 25340039 -69932612 + B1F1 SINE Alu 17 149 0 6 778 332 344 56 0 chr17 25340058 25340218 -69932433 + ID_B1 SINE B4 2 170 -54 6 778 349 257 98 10 chr17 25340138 25340240 -69932411 + PB1D7 SINE Alu 7 117 -3 6 778 966 96 7 20 chr17 25340259 25340408 -69932243 + B2_Mm2 SINE B2 1 147 -48 6 778 332 142 0 5 chr17 25340474 25340539 -69932112 + B2_Mm2 SINE B2 47 109 -107 6 778 564 15 0 0 chr17 25340553 25340618 -69932033 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 6 778 920 133 15 7 chr17 25340664 25340800 -69931851 - B1_Mur4 SINE Alu -13 137 1 6 778 955 32 159 0 chr17 25340831 25340957 -69931694 + B1_Mm SINE Alu 2 147 0 6 778 189 0 0 0 chr17 25340957 25340978 -69931673 + (A)n Simple_repeat Simple_repeat 1 21 0 6 778 1337 53 71 0 chr17 25340990 25341159 -69931492 + B2_Mm2 SINE B2 1 181 -14 6 778 510 315 27 7 chr17 25341215 25341365 -69931286 - RSINE1 SINE B4 -9 156 4 6 778 231 286 48 0 chr17 25341373 25341436 -69931215 - L1MC1 LINE L1 -18 6315 6250 6 778 1375 80 32 0 chr17 25341535 25341722 -69930929 - B2_Mm1a SINE B2 0 193 1 6 778 445 183 0 12 chr17 25341947 25342030 -69930621 - B4A SINE B4 -208 84 3 6 778 876 271 37 5 chr17 25342099 25342314 -69930337 - ID_B1 SINE B4 0 224 3 6 778 5781 94 37 21 chr17 25343263 25344134 -69928517 - RMER17D LTR ERVK -4 885 1 6 778 487 207 229 20 chr17 25347221 25347374 -69925277 + B3A SINE B2 1 185 -13 6 778 1171 61 0 39 chr17 25347437 25347590 -69925061 - B1_Mus1 SINE Alu 0 148 2 6 778 460 148 218 19 chr17 25348353 25348471 -69924180 + B1_Mm SINE Alu 2 148 0 6 778 1756 143 125 0 chr17 25349016 25349359 -69923292 - ORR1B1 LTR MaLR -8 386 1 6 778 1231 41 0 7 chr17 25349429 25349575 -69923076 + B1_Mus1 SINE Alu 3 147 -1 6 778 469 283 18 0 chr17 25349779 25349892 -69922759 - PB1D7 SINE Alu 0 120 6 6 778 277 275 56 56 chr17 25350201 25350309 -69922342 + ID_B1 SINE B4 79 186 -38 6 778 553 124 171 0 chr17 25350218 25350323 -69922328 + B1_Mur3 SINE Alu 12 134 -15 6 778 396 0 0 0 chr17 25350505 25350549 -69922102 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 6 778 1206 43 0 0 chr17 25350549 25350687 -69921964 - B1_Mm SINE Alu -8 139 2 6 778 1305 97 11 0 chr17 25350819 25350994 -69921657 - B2_Mm1t SINE B2 -14 179 3 6 778 301 328 25 8 chr17 25351151 25351271 -69921380 - MLT1B LTR MaLR -264 126 5 6 778 374 238 38 0 chr17 25351603 25351683 -69920968 + PB1D10 SINE Alu 27 109 -8 6 778 332 307 43 0 chr17 25351786 25351926 -69920725 + L1MB3 LINE L1 5978 6123 -60 6 778 262 256 38 68 chr17 25351928 25352042 -69920609 + PB1D10 SINE Alu 1 119 -1 6 778 1642 195 66 32 chr17 25352081 25352302 -69920349 - MTC LTR MaLR 0 421 209 6 778 1718 133 54 67 chr17 25352302 25352633 -69920018 - ORR1A4 LTR MaLR 0 329 3 6 778 1642 195 66 32 chr17 25352633 25352698 -69919953 - MTC LTR MaLR -213 208 143 6 778 847 155 279 0 chr17 25352698 25352859 -69919792 + B3 SINE B2 5 210 -6 6 778 1642 195 66 32 chr17 25352859 25352978 -69919673 - MTC LTR MaLR -279 142 1 6 778 221 294 0 0 chr17 25352978 25353025 -69919626 + ID4_ SINE ID 36 82 -1 6 778 435 259 129 0 chr17 25353047 25353163 -69919488 + RSINE1 SINE B4 3 133 -32 6 778 1155 95 0 0 chr17 25353274 25353421 -69919230 - B1_Mm SINE Alu 0 147 1 6 778 219 288 0 17 chr17 25353435 25353495 -69919156 + GA-rich Low_complexity Low_complexity 3 61 0 6 778 707 199 141 83 chr17 25354062 25354089 -69918562 - B3 SINE B2 0 216 192 6 778 1463 71 5 0 chr17 25354089 25354273 -69918378 - B2_Mm1t SINE B2 -7 186 2 6 778 707 199 141 83 chr17 25354273 25354437 -69918214 - B3 SINE B2 -25 191 14 6 778 1885 191 87 13 chr17 25356268 25356715 -69915936 + RMER4B LTR ERVK 1 480 -105 6 778 753 178 43 37 chr17 25357187 25357350 -69915301 - B3 SINE B2 -1 215 52 6 778 234 240 0 0 chr17 25358540 25358590 -69914061 - ID4_ SINE ID 0 83 34 6 778 257 268 0 0 chr17 25358712 25358768 -69913883 + PB1D7 SINE Alu 23 78 -42 6 778 288 327 0 0 chr17 25359165 25359275 -69913376 + C-rich Low_complexity Low_complexity 1 110 0 6 778 480 18 0 0 chr17 25359362 25359419 -69913232 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 778 1298 191 89 140 chr17 25361420 25361546 -69911105 - RLTR14 LTR ERV1 -3 379 252 6 778 618 39 0 0 chr17 25361546 25361623 -69911028 + (CTTG)n Simple_repeat Simple_repeat 2 78 0 6 778 1298 191 89 140 chr17 25361623 25361868 -69910783 - RLTR14 LTR ERV1 -131 251 27 6 778 265 284 15 0 chr17 25362346 25362419 -69910232 + ID4_ SINE ID 4 77 -75 6 778 405 266 133 0 chr17 25362422 25362565 -69910086 + MLT1B LTR MaLR 63 224 -166 6 778 262 324 101 32 chr17 25364314 25364365 -69908286 - B4 SINE B4 -4 220 140 6 778 251 315 14 0 chr17 25364365 25364438 -69908213 - B1_Mus1 SINE Alu -65 83 10 6 778 262 324 101 32 chr17 25364438 25364515 -69908136 - B4 SINE B4 -4 139 13 6 778 466 240 60 0 chr17 25364816 25364916 -69907735 - B1F1 SINE Alu -42 107 2 6 778 236 314 16 78 chr17 25365109 25365237 -69907414 + PB1D9 SINE Alu 1 120 0 6 778 225 162 50 0 chr17 25373082 25373140 -69899511 + B1F SINE Alu 46 142 -7 6 778 765 170 7 7 chr17 25373158 25373294 -69899357 + B1_Mur4 SINE Alu 15 150 0 6 778 1177 113 11 11 chr17 25373718 25373906 -69898745 + B2_Mm2 SINE B2 1 188 -7 6 778 301 270 10 20 chr17 25373926 25374028 -69898623 + B1F SINE Alu 1 101 -48 6 778 1152 242 51 11 chr17 25374010 25374286 -69898365 + B4A SINE B4 6 292 0 6 778 793 258 32 54 chr17 25374307 25374528 -69898123 + B3 SINE B2 1 216 0 6 778 244 280 44 22 chr17 25374542 25374677 -69897974 + L1M4 LINE L1 3230 3367 -2779 6 778 288 169 161 13 chr17 25374846 25374949 -69897702 - B1F SINE Alu -22 126 13 6 778 324 301 0 0 chr17 25375104 25375197 -69897454 + (CA)n Simple_repeat Simple_repeat 2 94 0 6 778 183 80 0 0 chr17 25375435 25375460 -69897191 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 6 778 3610 50 14 5 chr17 25375496 25375515 -69897136 - L1_Mus1 LINE L1 -5 6562 6538 6 778 382 91 26 0 chr17 25375515 25375592 -69897059 + (TA)n Simple_repeat Simple_repeat 2 80 0 6 778 3610 50 14 5 chr17 25375592 25376014 -69896637 - L1_Mus1 LINE L1 -30 6537 6117 6 778 890 49 114 0 chr17 25376303 25376426 -69896225 + B1_Mm SINE Alu 1 137 -10 6 778 195 42 0 0 chr17 25376426 25376450 -69896201 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 778 1122 57 14 0 chr17 25378923 25378935 -69893716 - B1_Mus2 SINE Alu 0 147 136 6 778 207 0 0 0 chr17 25378935 25378958 -69893693 + (TGGGGG)n Simple_repeat Simple_repeat 1 23 0 6 778 1122 57 14 0 chr17 25378958 25379086 -69893565 - B1_Mus2 SINE Alu -12 135 6 6 778 227 333 84 47 chr17 25380162 25380269 -69892382 - MER20 DNA MER1_type -87 132 22 6 778 291 293 64 16 chr17 25386616 25386741 -69885910 + MIR SINE MIR 40 170 -92 6 778 1304 86 37 21 chr17 25386757 25386948 -69885703 - B2_Mm2 SINE B2 -1 194 1 6 778 343 141 23 23 chr17 25392324 25392411 -69880240 + (TCTCTG)n Simple_repeat Simple_repeat 2 88 0 6 778 432 0 0 0 chr17 25392413 25392461 -69880190 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 778 216 97 0 0 chr17 25393010 25393041 -69879610 + (TCCG)n Simple_repeat Simple_repeat 4 34 0 6 778 37 23 0 0 chr17 25393238 25393282 -69879369 + GC_rich Low_complexity Low_complexity 1 44 0 6 778 508 76 31 0 chr17 25394062 25394154 -69878497 - B1_Mur4 SINE Alu -1 146 46 6 778 555 16 0 0 chr17 25394757 25394821 -69877830 + (GA)n Simple_repeat Simple_repeat 1 64 0 6 778 646 249 96 45 chr17 25395519 25395696 -69876955 - ID_B1 SINE B4 -16 208 23 6 778 890 195 155 22 chr17 25396624 25396850 -69875801 + MTC LTR MaLR 1 256 -165 6 778 1090 82 0 0 chr17 25396851 25396998 -69875653 + B1_Mus1 SINE Alu 2 148 0 6 778 1163 48 0 0 chr17 25401818 25401963 -69870688 + B1_Mus2 SINE Alu 2 146 -1 6 778 298 260 41 20 chr17 25402774 25402872 -69869779 + PB1D10 SINE Alu 18 117 0 6 778 315 222 0 0 chr17 25402884 25402947 -69869704 + B3 SINE B2 1 63 -153 6 778 255 132 18 70 chr17 25403011 25403068 -69869583 - B1_Mm SINE Alu 0 147 94 6 778 336 220 45 67 chr17 25403146 25403256 -69869395 + ID4 SINE ID 6 110 -42 6 778 360 319 0 56 chr17 25403522 25403537 -69869114 + ID_B1 SINE B4 79 212 -11 6 778 718 181 8 0 chr17 25403537 25403664 -69868987 + B1_Mus1 SINE Alu 9 136 -12 6 778 291 289 101 54 chr17 25403725 25403893 -69868758 - B2_Mm2 SINE B2 -16 179 4 6 778 343 240 148 10 chr17 25407771 25407872 -69864779 - PB1D7 SINE Alu -5 115 1 6 778 223 191 37 35 chr17 25407905 25407974 -69864677 - PB1D9 SINE Alu -6 143 65 6 778 499 222 90 9 chr17 25408181 25408333 -69864318 + B3 SINE B2 25 198 0 6 778 336 261 45 0 chr17 25409030 25409118 -69863533 + PB1D7 SINE Alu 22 113 -7 6 778 213 39 0 0 chr17 25409334 25409360 -69863291 + (CAAAC)n Simple_repeat Simple_repeat 4 29 0 6 778 25 31 0 0 chr17 25411045 25411077 -69861574 + GC_rich Low_complexity Low_complexity 1 32 0 6 778 1043 82 14 7 chr17 25412295 25412442 -69860209 - B1_Mus1 SINE Alu 0 148 1 6 778 2752 140 14 24 chr17 25412447 25412939 -69859712 - RLTR20B1 LTR ERVK -76 487 1 6 778 603 201 93 13 chr17 25413225 25413306 -69859345 - RLTR20C LTR ERVK 0 578 490 6 778 351 0 0 0 chr17 25413306 25413345 -69859306 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 778 603 201 93 13 chr17 25413345 25413414 -69859237 - RLTR20C LTR ERVK -89 489 417 6 778 998 211 57 75 chr17 25413406 25413724 -69858927 - RLTR20C LTR ERVK -222 312 1 6 778 666 215 97 58 chr17 25414126 25414333 -69858318 + B3 SINE B2 2 216 0 7 778 3437 188 137 15 chr17 25414387 25415253 -69857398 - RMER19B LTR ERVK 0 902 1 7 778 326 284 59 117 chr17 25415272 25415511 -69857140 + RLTR12B LTR ERVK 1 225 -303 7 778 3158 231 80 25 chr17 25415673 25416540 -69856111 + MYSERV-int LTR ERVK 4213 5126 -1424 7 778 387 297 36 62 chr17 25416540 25416579 -69856072 + RMER4A LTR ERVK 251 287 -179 7 778 1700 142 35 62 chr17 25416579 25416917 -69855734 - ORR1A4 LTR MaLR 0 329 1 7 778 387 286 23 96 chr17 25416917 25417087 -69855564 + RMER4A LTR ERVK 288 553 -32 7 778 4271 184 43 64 chr17 25417087 25418109 -69854542 + MYSERV6-int LTR ERVK 7780 8783 -176 7 778 1012 68 0 0 chr17 25418109 25418241 -69854410 + B1_Mus1 SINE Alu 5 136 -12 7 778 240 35 0 0 chr17 25418245 25418274 -69854377 + (CAA)n Simple_repeat Simple_repeat 2 30 0 7 778 4271 184 43 64 chr17 25418274 25418396 -69854255 + MYSERV6-int LTR ERVK 8784 8905 -54 7 778 239 71 24 0 chr17 25418409 25418451 -69854200 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 7 778 2398 54 0 0 chr17 25418495 25418808 -69853843 - L1Md_A LINE L1 0 6582 6270 7 778 1123 68 7 0 chr17 25418835 25418982 -69853669 - B1_Mus1 SINE Alu 0 148 1 7 778 316 155 28 14 chr17 25418983 25419055 -69853596 + MYSERV-int LTR ERVK 6478 6550 0 7 778 517 310 44 44 chr17 25419068 25419480 -69853171 + RLTR12B LTR ERVK 14 291 -68 7 778 421 176 52 52 chr17 25419695 25419791 -69852860 + MT2A LTR ERVL 1 96 -437 7 778 347 168 56 120 chr17 25419800 25419831 -69852820 - ORR1D1 LTR MaLR -3 381 357 7 778 845 182 37 21 chr17 25419831 25420022 -69852629 + B2_Mm2 SINE B2 1 194 -1 7 778 347 186 55 116 chr17 25420022 25420119 -69852532 - ORR1D1 LTR MaLR -28 356 249 7 778 261 0 0 0 chr17 25420122 25420151 -69852500 + (GA)n Simple_repeat Simple_repeat 2 30 0 7 778 416 198 104 0 chr17 25420177 25420273 -69852378 - ORR1D1 LTR MaLR -268 106 1 7 778 1280 137 15 0 chr17 25420289 25420494 -69852157 + MT2A LTR ERVL 92 299 -234 7 778 932 122 82 11 chr17 25420524 25420706 -69851945 + RMER6-int LTR ERVK 2981 3175 -2 7 778 2600 138 72 22 chr17 25420706 25421208 -69851443 + RMER6A LTR ERVK 1 527 -229 7 778 920 267 46 118 chr17 25421164 25421623 -69851028 + RLTR23 LTR ERV1 5 430 0 7 778 1151 134 0 15 chr17 25421623 25421820 -69850831 + RMER6A LTR ERVK 497 690 0 7 778 201 39 0 0 chr17 25421824 25421850 -69850801 + (TG)n Simple_repeat Simple_repeat 1 26 0 7 778 458 237 128 34 chr17 25422672 25422851 -69849800 + B3A SINE B2 1 196 -2 7 778 25 31 0 0 chr17 25422856 25422888 -69849763 + AT_rich Low_complexity Low_complexity 1 32 0 7 778 350 226 0 23 chr17 25422990 25423076 -69849575 + ID_B1 SINE B4 88 171 -53 7 778 305 268 50 20 chr17 25423076 25423089 -69849562 + B1F2 SINE Alu 7 108 -41 7 778 28 0 0 0 chr17 25423108 25423136 -69849515 + AT_rich Low_complexity Low_complexity 1 28 0 7 778 1251 20 0 0 chr17 25423136 25423283 -69849368 + B1_Mm SINE Alu 1 147 0 7 778 1081 153 11 5 chr17 25423293 25423483 -69849168 - B3 SINE B2 -7 209 19 7 778 586 306 12 0 chr17 25423650 25423810 -69848841 - RSINE1 SINE B4 0 165 4 7 778 871 144 0 0 chr17 25423869 25424008 -69848643 + B1_Mus2 SINE Alu 9 147 0 7 778 1193 48 0 0 chr17 25424242 25424388 -69848263 - B1_Mus2 SINE Alu 0 147 2 7 778 536 283 42 21 chr17 25424477 25424668 -69847983 - B3A SINE B2 0 198 4 7 778 483 243 80 7 chr17 25424668 25424794 -69847857 - B1_Mur1 SINE Alu -11 138 3 7 778 1119 130 15 25 chr17 25425409 25425606 -69847045 - B2_Mm2 SINE B2 0 195 1 7 778 768 189 28 0 chr17 25425674 25425817 -69846834 + B1_Mus1 SINE Alu 1 147 -1 7 778 580 228 86 8 chr17 25426072 25426200 -69846451 - B1_Mur1 SINE Alu -9 140 3 7 778 513 0 0 0 chr17 25426247 25426304 -69846347 + (TC)n Simple_repeat Simple_repeat 2 58 0 7 778 315 0 0 0 chr17 25426304 25426338 -69846313 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 778 579 204 19 0 chr17 25426344 25426452 -69846199 - B1_Mur4 SINE Alu -40 110 1 7 778 459 0 0 0 chr17 25426507 25426558 -69846093 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 778 447 252 14 21 chr17 25426578 25426720 -69845931 + Lx6 LINE L1 7277 7417 -43 7 778 1067 101 0 0 chr17 25426847 25426995 -69845656 + B1_Mus1 SINE Alu 1 148 0 7 778 198 150 0 0 chr17 25427085 25427125 -69845526 + (GGA)n Simple_repeat Simple_repeat 3 42 0 7 778 222 37 0 0 chr17 25427182 25427209 -69845442 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 779 599 264 33 28 chr17 25428593 25428807 -69843844 + B3 SINE B2 1 215 -1 7 779 1040 82 7 0 chr17 25428814 25428960 -69843691 + B1_Mus2 SINE Alu 1 147 0 7 779 676 194 75 0 chr17 25428990 25429124 -69843527 - B1_Mur2 SINE Alu 0 149 6 7 779 1455 58 0 5 chr17 25429165 25429354 -69843297 + B2_Mm2 SINE B2 3 190 -5 7 779 508 274 0 0 chr17 25430990 25431103 -69841548 + PB1D10 SINE Alu 2 114 -3 7 779 222 396 33 11 chr17 25431436 25431528 -69841123 + RSINE1 SINE B4 11 104 -61 7 779 786 216 5 196 chr17 25431942 25432126 -69840525 - B3 SINE B2 -6 210 44 7 779 473 182 10 20 chr17 25432133 25432234 -69840417 - RMER1B Other Other 0 1066 967 7 779 518 261 42 35 chr17 25432876 25433019 -69839632 + B1F2 SINE Alu 6 149 0 7 779 381 43 0 0 chr17 25433019 25433066 -69839585 + (GAAAA)n Simple_repeat Simple_repeat 1 47 0 7 779 414 0 0 0 chr17 25433209 25433255 -69839396 + (TC)n Simple_repeat Simple_repeat 1 46 0 7 779 369 75 0 0 chr17 25433257 25433310 -69839341 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 779 840 147 37 0 chr17 25433310 25433446 -69839205 - B1_Mur4 SINE Alu -9 141 1 7 779 648 0 0 0 chr17 25433483 25433555 -69839096 + (GA)n Simple_repeat Simple_repeat 1 72 0 7 779 412 252 0 61 chr17 25433594 25433708 -69838943 + PB1D7 SINE Alu 13 119 -1 7 779 354 315 124 27 chr17 25433984 25434170 -69838481 - MLT1B LTR MaLR -141 249 46 7 779 769 57 203 0 chr17 25437452 25437575 -69835076 + B1_Mus1 SINE Alu 1 148 0 7 779 213 171 24 0 chr17 25437591 25437632 -69835019 + CT-rich Low_complexity Low_complexity 3 44 0 7 779 814 275 65 14 chr17 25437689 25437966 -69834685 - B4A SINE B4 0 292 2 7 779 1279 90 21 11 chr17 25437968 25438158 -69834493 - B2_Mm2 SINE B2 -1 194 3 7 779 378 204 118 0 chr17 25438164 25438257 -69834394 - ID_B1 SINE B4 0 224 121 7 779 310 190 0 0 chr17 25438271 25438329 -69834322 - ID SINE ID -159 65 8 7 779 248 300 79 35 chr17 25438536 25438650 -69834001 + MLT1A0 LTR MaLR 140 258 -107 7 779 409 269 18 55 chr17 25439055 25439165 -69833486 - PB1D7 SINE Alu 0 120 15 7 779 212 288 156 113 chr17 25439060 25439201 -69833450 - B4 SINE B4 -73 219 73 7 779 538 180 15 3 chr17 25439266 25439374 -69833277 - B1_Mur1 SINE Alu -2 147 38 7 779 201 163 0 0 chr17 25439406 25439455 -69833196 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 779 747 174 0 0 chr17 25439468 25439821 -69832830 + (TG)n Simple_repeat Simple_repeat 1 353 0 7 779 745 253 182 32 chr17 25439822 25440075 -69832576 - B4 SINE B4 0 292 2 7 779 468 51 0 0 chr17 25440551 25440610 -69832041 + (TC)n Simple_repeat Simple_repeat 2 60 0 7 779 279 286 192 7 chr17 25440615 25440709 -69831942 - B1F SINE Alu -11 106 4 7 779 691 186 0 0 chr17 25440889 25441013 -69831638 - B1_Mur4 SINE Alu 0 150 27 7 779 1240 100 5 21 chr17 25441013 25441207 -69831444 + B2_Mm1a SINE B2 2 192 -1 7 779 662 204 0 93 chr17 25441207 25441244 -69831407 - B1F SINE Alu -110 39 3 7 779 493 183 191 163 chr17 25441324 25441533 -69831118 + ID_B1 SINE B4 2 216 -8 7 779 341 264 0 0 chr17 25441575 25441647 -69831004 + ID4 SINE ID 2 73 -10 7 779 929 164 0 11 chr17 25441762 25441941 -69830710 + T-rich Low_complexity Low_complexity 3 179 0 7 779 712 196 63 39 chr17 25441944 25442151 -69830500 - B3 SINE B2 -3 213 2 7 779 640 291 38 5 chr17 25442156 25442367 -69830284 - ID_B1 SINE B4 -4 220 3 7 779 496 259 37 0 chr17 25442937 25443045 -69829606 + PB1D7 SINE Alu 1 112 -8 7 779 618 331 55 33 chr17 25443846 25444118 -69828533 - MTD LTR MaLR -116 303 26 7 779 1784 158 20 38 chr17 25444119 25444406 -69828245 + ORR1C1 LTR MaLR 44 330 -48 7 779 1227 96 26 21 chr17 25444406 25444597 -69828054 + B2_Mm2 SINE B2 3 194 -1 7 779 1784 158 20 38 chr17 25444597 25444650 -69828001 + ORR1C1 LTR MaLR 331 378 0 7 779 397 272 94 16 chr17 25444678 25444805 -69827846 - MTC-int LTR MaLR -2 1578 1442 7 779 649 227 82 121 chr17 25444814 25445168 -69827483 - MTC-int LTR MaLR -529 1051 345 7 779 247 319 32 0 chr17 25447753 25447777 -69824874 - ID_B1 SINE B4 -46 178 85 7 779 269 269 30 0 chr17 25447777 25447844 -69824807 - PB1D10 SINE Alu -45 72 4 7 779 241 256 133 0 chr17 25447871 25447961 -69824690 - MLT1B LTR MaLR -274 116 15 7 779 228 241 252 27 chr17 25449026 25449039 -69823612 - B4A SINE B4 -62 230 95 7 779 454 265 10 0 chr17 25449039 25449137 -69823514 - PB1D10 SINE Alu -9 108 10 7 779 308 260 13 0 chr17 25449613 25449690 -69822961 - RMER15-int LTR ERVL -2861 2138 2061 7 779 853 60 0 0 chr17 25450483 25450600 -69822051 - B1_Mus2 SINE Alu 0 147 31 7 779 276 316 74 0 chr17 25450628 25450723 -69821928 + B3 SINE B2 1 102 -114 7 779 441 0 0 0 chr17 25451049 25451098 -69821553 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 779 495 274 40 0 chr17 25451213 25451337 -69821314 + B3 SINE B2 88 216 0 7 779 237 65 0 0 chr17 25451346 25451377 -69821274 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 7 779 675 219 0 55 chr17 25451396 25451541 -69821110 + B1_Mur2 SINE Alu 12 148 -1 7 779 549 0 0 0 chr17 25451814 25451875 -69820776 + (TC)n Simple_repeat Simple_repeat 2 62 0 7 779 1351 76 16 0 chr17 25452049 25452233 -69820418 - B2_Mm2 SINE B2 -7 188 2 7 779 692 232 7 0 chr17 25452809 25452951 -69819700 + B1_Mur1 SINE Alu 5 147 -2 7 779 232 354 0 0 chr17 25453036 25453115 -69819536 + RLTR24 LTR ERV1 9 87 -442 7 779 306 237 165 88 chr17 25453254 25453448 -69819203 + RLTR24 LTR ERV1 321 529 0 7 779 966 142 0 0 chr17 25453479 25453627 -69819024 + B1_Mur3 SINE Alu 1 148 -1 8 779 206 59 0 117 chr17 25453629 25453706 -69818945 + (CAAAC)n Simple_repeat Simple_repeat 1 68 0 8 779 558 129 167 33 chr17 25453707 25453827 -69818824 - RMER5 LTR ERV1 -197 337 202 8 779 810 103 8 16 chr17 25453839 25453967 -69818684 - B1_Mur3 SINE Alu -5 144 18 8 779 1281 106 16 0 chr17 25453977 25454165 -69818486 - B2_Mm2 SINE B2 -3 192 2 8 779 915 149 191 11 chr17 25454186 25454369 -69818282 - B3 SINE B2 0 216 1 8 779 859 180 87 5 chr17 25454369 25454524 -69818127 - RMER5 LTR ERV1 -323 211 42 8 779 540 0 0 0 chr17 25454524 25454584 -69818067 + (CAGT)n Simple_repeat Simple_repeat 2 61 0 8 779 859 180 87 5 chr17 25454584 25454623 -69818028 - RMER5 LTR ERV1 -493 41 2 8 779 669 225 104 5 chr17 25454802 25454994 -69817657 - B3 SINE B2 -1 215 5 8 779 360 64 0 0 chr17 25456012 25456059 -69816592 + (TG)n Simple_repeat Simple_repeat 1 47 0 8 779 1065 103 6 11 chr17 25458327 25458504 -69814147 + (TCC)n Simple_repeat Simple_repeat 3 178 0 8 779 1208 40 0 0 chr17 25458515 25458663 -69813988 - B1_Mus1 SINE Alu 0 148 1 8 779 226 234 101 67 chr17 25459574 25459693 -69812958 - L1MD LINE L1 -605 5754 5632 8 779 288 0 0 0 chr17 25460617 25460649 -69812002 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 779 8059 76 1 33 chr17 25461355 25462821 -69809830 - L1_Mus3 LINE L1 -6 6632 5267 8 779 1121 118 0 6 chr17 25462821 25463000 -69809651 + (TCC)n Simple_repeat Simple_repeat 3 180 0 8 779 1169 55 0 0 chr17 25463000 25463146 -69809505 - B1_Mus1 SINE Alu -2 146 1 8 779 4983 106 0 113 chr17 25463146 25463348 -69809303 - L1_Mus3 LINE L1 -617 5266 5067 8 779 852 72 8 31 chr17 25464472 25464601 -69808050 + B2_Mm1t SINE B2 1 126 -67 8 779 807 138 6 87 chr17 25464740 25464923 -69807728 + URR1B DNA MER1_type 58 225 0 8 779 230 282 56 14 chr17 25465424 25465496 -69807155 - ID4_ SINE ID -6 77 3 8 779 704 248 0 14 chr17 25467128 25467267 -69805384 - B1_Mur1 SINE Alu -6 143 7 8 779 441 0 0 0 chr17 25467272 25467321 -69805330 + (TC)n Simple_repeat Simple_repeat 2 50 0 8 779 1209 97 23 6 chr17 25467321 25467498 -69805153 - B2_Mm2 SINE B2 -15 180 1 8 779 442 183 9 19 chr17 25468650 25468756 -69803895 + CT-rich Low_complexity Low_complexity 3 107 0 8 779 497 257 43 35 chr17 25468875 25469016 -69803635 - RSINE1 SINE B4 -22 143 2 8 779 252 336 22 7 chr17 25469845 25469980 -69802671 - L1MD LINE L1 -595 5764 5628 8 779 355 226 18 45 chr17 25471716 25471827 -69800824 - PB1D10 SINE Alu 0 117 10 8 779 361 262 99 26 chr17 25471847 25472039 -69800612 - L1ME1 LINE L1 -313 5866 5661 8 779 324 221 28 30 chr17 25472239 25472351 -69800300 - B1F SINE Alu -4 116 1 8 779 561 179 10 24 chr17 25472366 25472652 -69799999 + CT-rich Low_complexity Low_complexity 1 282 0 8 779 913 149 0 11 chr17 25472709 25472886 -69799765 + CT-rich Low_complexity Low_complexity 4 178 0 8 779 390 290 28 0 chr17 25472896 25473003 -69799648 - PB1D10 SINE Alu -5 112 3 8 779 519 295 12 40 chr17 25472917 25473005 -69799646 - ID_B1 SINE B4 -55 169 83 8 779 939 267 48 43 chr17 25473005 25473380 -69799271 - MTE2b LTR MaLR -2 377 1 8 779 519 295 12 40 chr17 25473380 25473464 -69799187 - ID SINE ID -142 82 2 8 779 338 265 100 25 chr17 25473466 25473586 -69799065 - L1ME1 LINE L1 -741 5443 5315 8 779 181 43 0 96 chr17 25473850 25473902 -69798749 + (GGGAGA)n Simple_repeat Simple_repeat 5 51 0 8 779 422 274 16 39 chr17 25474556 25474685 -69797966 + B3A SINE B2 73 198 0 8 779 1138 166 39 263 chr17 25475758 25476241 -69796410 - ORR1C1 LTR MaLR -3 375 1 8 779 861 10 0 0 chr17 25476399 25476497 -69796154 + (GA)n Simple_repeat Simple_repeat 1 98 0 8 779 268 255 93 19 chr17 25476909 25477017 -69795634 + PB1D10 SINE Alu 2 117 0 8 779 343 286 9 9 chr17 25477203 25477309 -69795342 + B4 SINE B4 2 107 -185 8 779 932 192 120 117 chr17 25477309 25477502 -69795149 + Lx5 LINE L1 6152 6361 -689 8 779 1145 43 0 0 chr17 25477502 25477640 -69795011 + B1_Mus2 SINE Alu 1 138 -9 8 779 260 70 23 0 chr17 25477640 25477683 -69794968 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 8 779 2239 226 77 27 chr17 25477683 25478450 -69794201 + Lx5 LINE L1 6362 7050 0 8 779 564 15 0 0 chr17 25478552 25478617 -69794034 + (CA)n Simple_repeat Simple_repeat 2 66 0 8 779 273 58 0 55 chr17 25478986 25479041 -69793610 + (TTTTG)n Simple_repeat Simple_repeat 2 53 0 8 779 758 220 0 20 chr17 25479044 25479197 -69793454 + B1_Mur4 SINE Alu 1 150 0 8 779 239 326 62 10 chr17 25479299 25479395 -69793256 - B4 SINE B4 -149 143 43 8 779 969 114 0 20 chr17 25479438 25479590 -69793061 - B1_Mur4 SINE Alu 0 150 2 8 779 729 103 0 0 chr17 25479643 25479769 -69792882 + (TG)n Simple_repeat Simple_repeat 1 126 0 8 779 502 232 165 16 chr17 25479798 25479925 -69792726 - RSINE1 SINE B4 -17 148 3 8 779 238 282 0 66 chr17 25483149 25483225 -69789426 - RMER1C Other Other -12 1330 1260 8 779 1931 300 141 20 chr17 25483329 25484094 -69788557 - Lx8 LINE L1 -252 7221 6355 8 779 816 135 68 0 chr17 25484094 25484227 -69788424 + B1_Mus1 SINE Alu 1 142 -6 8 779 1931 300 141 20 chr17 25484227 25484426 -69788225 - Lx8 LINE L1 -1119 6354 6140 8 779 453 128 35 11 chr17 25484421 25484508 -69788143 + Lx8 LINE L1 5707 5795 -1678 8 779 687 225 0 0 chr17 25484508 25484637 -69788014 + B1_Mur3 SINE Alu 1 129 -20 8 779 285 136 0 0 chr17 25484637 25484681 -69787970 + Lx8 LINE L1 5811 5854 -26 8 779 448 321 93 38 chr17 25485189 25485480 -69787171 + Lx8 LINE L1 5837 6143 -1330 8 779 708 193 140 29 chr17 25485780 25485951 -69786700 - B3 SINE B2 0 216 27 8 779 1116 128 0 0 chr17 25486415 25486594 -69786057 + (TGAA)n Simple_repeat Simple_repeat 2 180 0 8 779 3266 199 89 40 chr17 25487029 25487881 -69784770 - RMER13B LTR ERVK -14 894 1 8 779 696 160 17 0 chr17 25487972 25488091 -69784560 - B1_Mus1 SINE Alu -26 122 2 8 779 505 160 57 48 chr17 25488091 25488190 -69784461 + B1_Mur2 SINE Alu 36 135 -14 8 779 243 207 78 35 chr17 25488218 25488333 -69784318 + L1M4 LINE L1 2883 3002 -3144 8 779 1158 62 0 0 chr17 25489202 25489348 -69783303 + B1_Mus2 SINE Alu 2 147 0 8 779 344 288 48 0 chr17 25489549 25489666 -69782985 - B1F1 SINE Alu -17 130 6 8 779 195 345 0 11 chr17 25489703 25489794 -69782857 + MIR3 SINE MIR 110 199 -9 8 779 204 125 0 0 chr17 25490009 25490041 -69782610 + (TCTCCC)n Simple_repeat Simple_repeat 4 35 0 8 779 258 308 38 23 chr17 25490061 25490194 -69782457 - L1MC3 LINE L1 -20 7765 7631 8 779 394 116 0 82 chr17 25490240 25490331 -69782320 - B1_Mur3 SINE Alu 0 149 42 8 779 623 200 271 0 chr17 25490462 25490632 -69782019 - B3 SINE B2 0 216 1 8 779 389 270 144 0 chr17 25490658 25490769 -69781882 - ID_B1 SINE B4 0 224 98 8 779 290 307 48 81 chr17 25490769 25490782 -69781869 - PB1D7 SINE Alu 0 120 1 8 779 279 268 188 0 chr17 25490822 25490934 -69781717 - L1MC3 LINE L1 -354 7431 7299 8 779 1178 47 0 13 chr17 25490991 25491141 -69781510 - B1_Mus1 SINE Alu 0 148 1 8 779 673 281 82 0 chr17 25491156 25491253 -69781398 - ID_B1 SINE B4 -38 186 82 8 779 279 0 0 0 chr17 25491253 25491284 -69781367 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 8 779 673 281 82 0 chr17 25491284 25491357 -69781294 - ID SINE ID -143 81 3 8 779 2148 150 37 8 chr17 25491671 25492072 -69780579 + RLTR20D LTR ERVK 1 464 -104 8 779 579 81 0 0 chr17 25492072 25492158 -69780493 + (TG)n Simple_repeat Simple_repeat 2 87 0 8 779 824 252 84 0 chr17 25492158 25492194 -69780457 + RLTR20D LTR ERVK 431 445 -89 8 779 462 139 0 0 chr17 25492236 25492322 -69780329 + (TG)n Simple_repeat Simple_repeat 2 87 0 8 779 270 0 0 0 chr17 25492400 25492430 -69780221 + (TG)n Simple_repeat Simple_repeat 2 31 0 8 779 553 311 129 25 chr17 25492475 25492963 -69779688 + L1M4 LINE L1 4451 4989 -1157 8 779 342 318 34 0 chr17 25492966 25493054 -69779597 + B1F SINE Alu 1 91 -58 8 779 1092 88 0 0 chr17 25493060 25493207 -69779444 + B1_Mus2 SINE Alu 1 147 0 8 779 1375 88 5 0 chr17 25493209 25493402 -69779249 + B2_Mm2 SINE B2 2 195 0 8 779 218 56 0 27 chr17 25493564 25493601 -69779050 + (CCAA)n Simple_repeat Simple_repeat 1 36 0 8 779 610 260 58 6 chr17 25493660 25493834 -69778817 + B3A SINE B2 2 184 -14 8 779 562 228 73 57 chr17 25493884 25494061 -69778590 + B3A SINE B2 3 182 -16 8 779 428 175 8 0 chr17 25494095 25494221 -69778430 + (CA)n Simple_repeat Simple_repeat 1 127 0 8 779 6953 166 53 116 chr17 25494371 25495457 -69777194 + Lx6 LINE L1 5074 6081 -1379 8 779 441 0 0 0 chr17 25495457 25495506 -69777145 + (TG)n Simple_repeat Simple_repeat 1 49 0 8 779 6953 231 91 11 chr17 25495506 25496747 -69775904 + Lx6 LINE L1 6082 7459 -1 8 779 775 249 19 25 chr17 25496779 25496998 -69775653 + RSINE1 SINE B4 9 220 -72 8 779 624 150 0 0 chr17 25497023 25497136 -69775515 + GA-rich Low_complexity Low_complexity 4 116 0 8 779 311 286 106 77 chr17 25497474 25497682 -69774969 - L1MC4a LINE L1 -239 7643 7430 8 779 762 276 98 102 chr17 25498308 25498923 -69773728 + RMER13A LTR ERVK 14 670 -238 8 779 317 279 52 31 chr17 25499080 25499176 -69773475 - RMER15 LTR ERVL -122 453 356 8 779 260 254 0 0 chr17 25499294 25499353 -69773298 + CT-rich Low_complexity Low_complexity 3 61 0 8 779 817 157 13 13 chr17 25499357 25499506 -69773145 - B1_Mur4 SINE Alu 0 150 2 8 779 1573 25 5 0 chr17 25499804 25500000 -69772651 + RLTR13C2 LTR ERVK 1 197 -611 8 779 1996 109 52 46 chr17 25500000 25500345 -69772306 + RLTR13C2 LTR ERVK 198 667 -141 1 779 1255 28 7 0 chr17 25500345 25500489 -69772162 + B1_Mus2 SINE Alu 2 146 -1 2 779 1996 151 83 74 chr17 25500489 25500653 -69771998 + RLTR13C2 LTR ERVK 668 808 0 1 779 829 118 5 38 chr17 25501509 25501694 -69770957 + CT-rich Low_complexity Low_complexity 2 180 0 3 779 477 47 0 0 chr17 25501696 25501760 -69770891 + (TCTCTG)n Simple_repeat Simple_repeat 2 65 0 4 779 738 62 0 0 chr17 25502972 25503068 -69769583 + (TG)n Simple_repeat Simple_repeat 1 96 0 5 779 271 275 137 32 chr17 25505011 25505052 -69767599 + B1F SINE Alu 12 148 -1 6 779 370 277 0 0 chr17 25505052 25505135 -69767516 + ID_B1 SINE B4 141 223 -1 7 779 360 0 0 0 chr17 25506440 25506480 -69766171 + (TC)n Simple_repeat Simple_repeat 2 41 0 8 779 297 0 0 0 chr17 25506481 25506514 -69766137 + (TG)n Simple_repeat Simple_repeat 1 33 0 9 779 396 0 0 0 chr17 25506514 25506557 -69766094 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 779 483 256 68 6 chr17 25508697 25508858 -69763793 - L1MB5 LINE L1 -6 6168 5998 1 779 1263 141 37 9 chr17 25509026 25509241 -69763410 + URR1A DNA MER1_type 2 222 -4 1 779 754 157 0 11 chr17 25515845 25516025 -69756626 + (CCCCG)n Simple_repeat Simple_repeat 2 179 0 1 779 198 0 0 0 chr17 25517068 25517090 -69755561 + (CAAG)n Simple_repeat Simple_repeat 3 24 0 1 779 312 27 0 0 chr17 25518219 25518256 -69754395 + (CAGG)n Simple_repeat Simple_repeat 4 40 0 1 779 216 97 0 0 chr17 25519607 25519638 -69753013 + (CAG)n Simple_repeat Simple_repeat 3 33 0 1 779 933 159 111 62 chr17 25524192 25524400 -69748251 - URR1A DNA MER1_type -8 218 1 1 779 252 86 0 0 chr17 25529174 25529209 -69743442 + (TGG)n Simple_repeat Simple_repeat 3 37 0 1 779 225 0 0 0 chr17 25532073 25532098 -69740553 + (TGGGGG)n Simple_repeat Simple_repeat 5 29 0 1 779 239 381 38 19 chr17 25533366 25533524 -69739127 - MIRb SINE MIR -21 247 87 2 779 223 28 0 53 chr17 25542281 25542319 -69730332 + (TGGGGG)n Simple_repeat Simple_repeat 1 36 0 2 779 432 0 0 0 chr17 25545152 25545200 -69727451 + (A)n Simple_repeat Simple_repeat 1 48 0 2 779 24 0 0 0 chr17 25545552 25545576 -69727075 + GC_rich Low_complexity Low_complexity 1 24 0 2 779 326 291 213 43 chr17 25545922 25546199 -69726452 - MLT1A0 LTR MaLR -40 325 2 2 779 342 0 0 0 chr17 25547719 25547757 -69724894 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 779 183 42 0 0 chr17 25548077 25548101 -69724550 + (A)n Simple_repeat Simple_repeat 1 24 0 2 779 269 303 71 116 chr17 25548735 25548933 -69723718 + Charlie1b DNA MER1_type 221 409 -114 2 779 256 325 94 24 chr17 25548924 25548951 -69723700 - B2_Mm1t SINE B2 -11 182 153 2 779 489 47 0 0 chr17 25548951 25549015 -69723636 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 779 486 250 131 3 chr17 25549015 25549157 -69723494 - B3A SINE B2 -41 152 1 2 779 7294 36 0 0 chr17 25549790 25550758 -69721893 + L1_Mus1 LINE L1 5618 6567 0 3 779 234 0 0 0 chr17 25553198 25553224 -69719427 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 779 390 273 68 55 chr17 25554560 25554723 -69717928 + MTEb LTR MaLR 52 216 -163 3 779 549 271 0 0 chr17 25554762 25554939 -69717712 + (TA)n Simple_repeat Simple_repeat 1 177 0 3 779 269 200 66 13 chr17 25556485 25556561 -69716090 + L1M5 LINE L1 5585 5664 -780 3 779 405 0 0 0 chr17 25557098 25557143 -69715508 + (CAGG)n Simple_repeat Simple_repeat 1 45 0 3 780 905 275 18 14 chr17 25559309 25559530 -69713121 + ID_B1 SINE B4 1 222 -2 3 780 430 274 28 0 chr17 25559551 25559657 -69712994 + RSINE1 SINE B4 45 153 -12 3 780 312 284 102 13 chr17 25561801 25561958 -69710693 - MLT1C LTR MaLR -28 439 269 3 780 426 96 0 0 chr17 25561985 25562058 -69710593 + (TCTG)n Simple_repeat Simple_repeat 2 74 0 3 780 279 0 0 0 chr17 25569281 25569312 -69703339 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 780 25 65 0 0 chr17 25570619 25570665 -69701986 + GC_rich Low_complexity Low_complexity 1 46 0 4 780 27 87 0 0 chr17 25570735 25570804 -69701847 + GC_rich Low_complexity Low_complexity 1 69 0 4 780 267 103 0 0 chr17 25573320 25573359 -69699292 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 780 1142 62 14 0 chr17 25574239 25574383 -69698268 - B1_Mus2 SINE Alu 0 147 2 4 780 1975 163 82 37 chr17 25574507 25574617 -69698034 + MTC LTR MaLR 1 112 -309 4 780 342 0 0 0 chr17 25574617 25574655 -69697996 + (TAA)n Simple_repeat Simple_repeat 1 38 0 4 780 1975 163 82 37 chr17 25574655 25574945 -69697706 + MTC LTR MaLR 113 418 -3 4 780 5236 165 131 25 chr17 25574982 25575945 -69696706 + MTC-int LTR MaLR 1 1074 -184 4 780 2468 98 3 3 chr17 25575945 25576272 -69696379 + ORR1A2 LTR MaLR 1 327 0 4 780 5236 165 131 25 chr17 25576272 25576445 -69696206 + MTC-int LTR MaLR 1075 1258 0 4 780 2401 164 14 26 chr17 25576445 25576871 -69695780 + MTC LTR MaLR 1 421 0 4 780 279 331 156 23 chr17 25577140 25577397 -69695254 + L1MB8 LINE L1 5669 5959 -219 4 780 520 295 22 68 chr17 25578553 25578775 -69693876 + RMER13A LTR ERVK 649 860 0 4 780 782 141 88 7 chr17 25578795 25578931 -69693720 + B1_Mus1 SINE Alu 2 148 0 5 780 265 260 173 0 chr17 25579256 25579360 -69693291 + ORR1C2 LTR MaLR 66 187 -197 5 780 281 328 132 19 chr17 25579800 25580058 -69692593 + L1ME1 LINE L1 5820 6106 -73 5 780 460 270 0 42 chr17 25580142 25580285 -69692366 + ID_B1 SINE B4 87 223 -1 5 780 487 238 23 38 chr17 25580159 25580290 -69692361 + B1F SINE Alu 21 149 0 5 780 207 189 0 0 chr17 25580356 25580409 -69692242 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 780 216 316 26 13 chr17 25581085 25581162 -69691489 - MIR SINE MIR -63 145 68 5 780 300 392 33 29 chr17 25581817 25582027 -69690624 - MLT1D LTR MaLR -294 211 1 5 780 247 335 20 0 chr17 25583271 25583423 -69689228 + L1MEd LINE L1 958 1112 -5024 5 780 317 348 35 69 chr17 25583481 25583654 -69688997 + MER58A DNA MER1_type 43 209 -15 5 780 243 407 0 9 chr17 25583872 25583884 -69688767 + ID SINE ID 72 82 -142 6 780 370 333 0 17 chr17 25583884 25584000 -69688651 + PB1D10 SINE Alu 3 116 -1 6 780 373 98 33 0 chr17 25584004 25584065 -69688586 + ID SINE ID 2 64 -160 6 780 410 326 40 10 chr17 25584293 25584491 -69688160 + L1MEd LINE L1 4564 4767 -1379 5 780 454 229 92 0 chr17 25584607 25584716 -69687935 + MER63D DNA AcHobo 7 125 -936 6 780 358 349 0 8 chr17 25584895 25585025 -69687626 + MER63D DNA AcHobo 843 971 -90 6 780 459 0 0 0 chr17 25587993 25588044 -69684607 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 780 414 6 0 159 chr17 25588685 25588899 -69683752 + (CAGAG)n Simple_repeat Simple_repeat 1 180 0 6 780 333 328 0 0 chr17 25588818 25588946 -69683705 + (CTGGGG)n Simple_repeat Simple_repeat 3 130 0 6 780 384 295 75 71 chr17 25589600 25589826 -69682825 - MLT1D LTR MaLR -271 234 8 6 780 180 77 0 0 chr17 25590638 25590664 -69681987 + (CACCC)n Simple_repeat Simple_repeat 3 28 0 6 780 189 74 0 0 chr17 25592688 25592715 -69679936 + L2 LINE L2 3029 3055 -364 6 780 194 292 21 53 chr17 25593806 25593900 -69678751 - L2c LINE L2 -183 3204 3114 7 780 734 314 5 26 chr17 25596757 25596947 -69675704 - B4A SINE B4 0 292 107 7 780 464 256 77 0 chr17 25596956 25597112 -69675539 - L1_Rod LINE L1 -3482 2365 2198 7 780 609 171 21 7 chr17 25597112 25597253 -69675398 + CT-rich Low_complexity Low_complexity 1 143 0 7 780 1429 75 37 0 chr17 25597254 25597441 -69675210 - B2_Mm2 SINE B2 0 195 2 7 780 2197 232 120 20 chr17 25597441 25598376 -69674275 - L1_Rod LINE L1 -3635 2212 1183 7 780 1188 62 7 0 chr17 25598376 25598521 -69674130 - B1_Mm SINE Alu 0 147 2 7 780 541 233 57 99 chr17 25598521 25598689 -69673962 - L1_Rod LINE L1 -6426 1182 1038 7 780 347 0 23 0 chr17 25601498 25601541 -69671110 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 780 182 333 0 97 chr17 25602353 25602466 -69670185 + MIRb SINE MIR 74 175 -93 7 780 254 266 80 13 chr17 25604123 25604201 -69668450 - PB1D10 SINE Alu -45 72 2 7 780 252 143 0 0 chr17 25604348 25604390 -69668261 + (TTA)n Simple_repeat Simple_repeat 1 42 0 7 780 861 275 19 0 chr17 25604390 25604597 -69668054 - B4A SINE B4 -68 224 14 8 780 21 0 0 0 chr17 25606748 25606769 -69665882 + GC_rich Low_complexity Low_complexity 1 21 0 8 780 309 26 0 0 chr17 25607909 25607947 -69664704 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 780 696 250 0 14 chr17 25608083 25608229 -69664422 - B1_Mur1 SINE Alu -4 145 2 8 780 489 289 103 56 chr17 25608231 25608444 -69664207 - B4A SINE B4 -65 227 5 8 780 863 111 0 29 chr17 25609450 25609589 -69663062 - B1_Mus1 SINE Alu -1 147 13 8 780 392 275 23 77 chr17 25609480 25609610 -69663041 - MT2B LTR ERVL -324 277 155 8 780 334 228 96 0 chr17 25609795 25609888 -69662763 + PB1D10 SINE Alu 13 114 -3 8 780 378 311 71 84 chr17 25615514 25615753 -69656898 - RMER15 LTR ERVL -2 573 338 8 780 590 225 20 71 chr17 25616118 25616314 -69656337 - RMER15 LTR ERVL -47 528 343 8 780 256 339 90 6 chr17 25619303 25619469 -69653182 + Lx8 LINE L1 7045 7224 -249 9 780 307 292 87 17 chr17 25619578 25619693 -69652958 + Lx8 LINE L1 7164 7286 -187 9 780 1072 96 7 7 chr17 25621189 25621336 -69651315 - B1_Mus2 SINE Alu 0 147 1 9 780 700 249 60 75 chr17 25623282 25623482 -69649169 + B3A SINE B2 1 197 -1 9 780 251 207 0 65 chr17 25623510 25623572 -69649079 + B1_Mus2 SINE Alu 1 58 -89 9 780 537 0 137 0 chr17 25623595 25623748 -69648903 + (CAGG)n Simple_repeat Simple_repeat 2 175 0 9 780 228 68 0 64 chr17 25623797 25623844 -69648807 + PB1D9 SINE Alu 42 85 -35 9 780 662 210 105 0 chr17 25624298 25624441 -69648210 + B3A SINE B2 3 160 -38 9 780 426 39 0 0 chr17 25624456 25624508 -69648143 + (CA)n Simple_repeat Simple_repeat 2 53 0 9 780 435 320 38 59 chr17 25624508 25624694 -69647957 - ID_B1 SINE B4 -11 213 32 9 780 237 233 184 0 chr17 25624707 25624810 -69647841 + L1MB3 LINE L1 5822 5943 -240 1 780 769 233 44 126 chr17 25630901 25631107 -69641544 + B3A SINE B2 7 198 0 1 780 646 257 43 112 chr17 25631523 25631755 -69640896 + ID_B1 SINE B4 9 224 0 1 780 1062 185 14 38 chr17 25631755 25631968 -69640683 + B3 SINE B2 3 210 -6 1 780 360 0 0 0 chr17 25634261 25634301 -69638350 + (GGGTG)n Simple_repeat Simple_repeat 5 44 0 1 780 843 86 0 0 chr17 25635025 25635142 -69637509 + (TC)n Simple_repeat Simple_repeat 1 117 0 1 780 868 212 91 25 chr17 25635820 25635975 -69636676 + B3 SINE B2 2 165 -51 1 780 477 0 0 0 chr17 25635975 25636028 -69636623 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 780 868 212 91 25 chr17 25636028 25636070 -69636581 + B3 SINE B2 166 212 -4 1 780 946 233 43 24 chr17 25640885 25641092 -69631559 - B3 SINE B2 -5 211 1 1 780 912 19 0 0 chr17 25641205 25641311 -69631340 + (TC)n Simple_repeat Simple_repeat 1 106 0 1 780 426 239 80 0 chr17 25641337 25641475 -69631176 - L1MA4A LINE L1 -415 5888 5740 1 780 453 333 6 62 chr17 25642010 25642170 -69630481 + B4A SINE B4 126 276 -16 1 780 770 145 18 29 chr17 25644050 25644157 -69628494 + polypyrimidine Low_complexity Low_complexity 63 170 0 1 780 961 127 23 0 chr17 25644157 25644330 -69628321 + C-rich Low_complexity Low_complexity 1 177 0 1 780 770 145 18 29 chr17 25644330 25644393 -69628258 + polypyrimidine Low_complexity Low_complexity 2 62 0 1 780 619 269 14 0 chr17 25644395 25644536 -69628115 - ID_B1 SINE B4 0 224 82 1 780 208 261 0 0 chr17 25647023 25647069 -69625582 - L2b LINE L2 0 3375 3330 1 780 220 309 0 0 chr17 25649312 25649380 -69623271 + (TG)n Simple_repeat Simple_repeat 2 69 0 1 780 429 248 109 0 chr17 25649651 25649752 -69622899 + PB1D10 SINE Alu 1 112 -5 1 780 1939 177 186 35 chr17 25650890 25651406 -69621245 - RMER19B LTR ERVK 0 902 309 1 780 333 327 108 56 chr17 25651696 25651910 -69620741 + RMER15 LTR ERVL 347 571 -4 1 780 1756 203 95 8 chr17 25652837 25653215 -69619436 + MTD LTR MaLR 1 411 -8 1 780 294 29 0 0 chr17 25653638 25653673 -69618978 + (GGA)n Simple_repeat Simple_repeat 2 36 0 1 780 1184 50 0 0 chr17 25658130 25658269 -69614382 + B1_Mus2 SINE Alu 1 139 -8 1 780 315 65 0 0 chr17 25658269 25658315 -69614336 + (CCAA)n Simple_repeat Simple_repeat 2 47 0 1 780 225 329 25 0 chr17 25659025 25659104 -69613547 + L2a LINE L2 3346 3426 0 1 780 304 235 15 0 chr17 25659677 25659745 -69612906 - ID4_ SINE ID -1 82 14 1 780 392 245 45 9 chr17 25659774 25659885 -69612766 - PB1D10 SINE Alu 0 117 3 1 780 306 0 39 39 chr17 25661006 25661057 -69611594 + (CAAAAA)n Simple_repeat Simple_repeat 3 53 0 1 780 474 152 0 0 chr17 25662455 25662547 -69610104 + (CAGAGA)n Simple_repeat Simple_repeat 3 94 0 1 780 371 310 86 8 chr17 25662549 25662666 -69609985 - B4 SINE B4 -22 270 145 1 780 273 267 7 27 chr17 25664312 25664462 -69608189 + (TGGA)n Simple_repeat Simple_repeat 2 148 0 1 780 1948 138 52 40 chr17 25665290 25665435 -69607216 + ORR1B2 LTR MaLR 2 146 -221 1 780 675 0 0 0 chr17 25665435 25665510 -69607141 + (TC)n Simple_repeat Simple_repeat 1 75 0 1 780 1948 138 52 40 chr17 25665510 25665712 -69606939 + ORR1B2 LTR MaLR 147 352 -15 1 780 1838 127 74 10 chr17 25666098 25666407 -69606244 - ORR1A4 LTR MaLR 0 329 1 1 780 620 323 98 57 chr17 25666696 25667031 -69605620 + ORR1E LTR MaLR 1 349 -10 1 780 590 304 189 26 chr17 25668279 25668586 -69604065 + ORR1E LTR MaLR 3 359 0 1 780 544 208 112 0 chr17 25669145 25669270 -69603381 + B1_Mus2 SINE Alu 7 145 -2 1 780 639 240 146 5 chr17 25669652 25669857 -69602794 + RMER15 LTR ERVL 338 571 -4 1 780 1001 279 16 8 chr17 25670038 25670287 -69602364 + B4A SINE B4 1 251 -41 1 780 30 0 0 0 chr17 25670296 25670326 -69602325 + AT_rich Low_complexity Low_complexity 1 30 0 1 780 207 171 0 0 chr17 25670397 25670432 -69602219 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 780 204 180 20 20 chr17 25670542 25670593 -69602058 + MIRm SINE MIR 78 128 -148 1 780 441 0 0 0 chr17 25670672 25670721 -69601930 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 780 269 169 136 0 chr17 25671220 25671279 -69601372 - B1F SINE Alu -82 67 1 1 780 208 320 58 10 chr17 25672672 25672776 -69599875 - MIR SINE MIR -113 149 41 1 780 2861 148 82 13 chr17 25674888 25675437 -69597214 - RMER19B LTR ERVK -310 592 6 1 780 327 137 0 40 chr17 25675950 25676026 -69596625 + CT-rich Low_complexity Low_complexity 1 73 0 1 780 896 258 46 57 chr17 25676067 25676347 -69596304 - B4 SINE B4 -1 291 15 1 780 376 311 0 32 chr17 25677361 25677484 -69595167 + PB1D7 SINE Alu 1 119 -1 1 780 629 246 42 7 chr17 25677500 25677643 -69595008 + B1_Mur1 SINE Alu 2 149 0 1 780 270 286 29 48 chr17 25677999 25678102 -69594549 + L1MB8 LINE L1 6027 6127 -51 1 780 650 320 20 30 chr17 25678132 25678335 -69594316 + ID_B1 SINE B4 4 204 -20 1 780 569 246 71 21 chr17 25678355 25678496 -69594155 + B1F SINE Alu 1 148 -1 1 780 200 282 0 58 chr17 25679306 25679494 -69593157 + (CTGTG)n Simple_repeat Simple_repeat 1 177 0 1 780 765 161 0 0 chr17 25680308 25680420 -69592231 - PB1D10 SINE Alu -1 116 5 1 780 518 200 79 30 chr17 25681780 25681945 -69590706 + RMER4B LTR ERVK 1 173 -412 1 780 646 108 18 0 chr17 25681933 25682044 -69590607 + URR1B DNA MER1_type 73 185 -40 1 780 1152 77 0 0 chr17 25682046 25682189 -69590462 + B1_Mus1 SINE Alu 4 146 -2 1 780 813 21 0 0 chr17 25682189 25682284 -69590367 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 1 780 308 246 29 0 chr17 25682332 25682401 -69590250 + MTEb LTR MaLR 3 73 -306 1 780 488 244 28 69 chr17 25682860 25683005 -69589646 + MTEb LTR MaLR 85 223 -156 1 780 1693 193 96 21 chr17 25683205 25683594 -69589057 - MTD LTR MaLR -12 407 1 1 780 270 267 13 0 chr17 25683853 25683928 -69588723 + C-rich Low_complexity Low_complexity 3 78 0 1 780 293 0 27 0 chr17 25684720 25684757 -69587894 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 1 780 534 289 178 8 chr17 25685157 25685398 -69587253 - MLT1B LTR MaLR -65 325 44 1 780 210 315 0 64 chr17 25686717 25686795 -69585856 + MIR SINE MIR 108 180 -82 1 780 585 0 0 0 chr17 25687347 25687412 -69585239 + (TGG)n Simple_repeat Simple_repeat 1 65 0 1 780 225 0 0 0 chr17 25687882 25687907 -69584744 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 1 780 403 194 0 0 chr17 25687946 25688013 -69584638 - ID4_ SINE ID -16 67 1 1 780 278 343 0 0 chr17 25688104 25688174 -69584477 - B4A SINE B4 0 292 223 1 780 611 233 0 16 chr17 25688226 25688348 -69584303 - RSINE1 SINE B4 -35 130 11 1 780 617 283 122 0 chr17 25688351 25688556 -69584095 - B4A SINE B4 -62 230 1 1 780 359 286 10 30 chr17 25688562 25688663 -69583988 - PB1D10 SINE Alu -5 112 14 1 780 289 335 114 0 chr17 25688664 25688840 -69583811 - L1MB5 LINE L1 -41 6133 5938 1 780 301 307 169 19 chr17 25688925 25689148 -69583503 - L1MB7 LINE L1 -222 5962 5708 1 780 207 0 0 0 chr17 25689838 25689861 -69582790 + (T)n Simple_repeat Simple_repeat 1 23 0 1 780 285 267 22 22 chr17 25689861 25689953 -69582698 - MTEa LTR MaLR -8 371 280 1 781 358 287 208 70 chr17 25690246 25690589 -69582062 + MLT1C LTR MaLR 86 473 -32 1 781 250 320 11 4 chr17 25691127 25691229 -69581422 + B1F SINE Alu 40 142 -8 1 781 507 284 15 0 chr17 25691252 25691386 -69581265 + ID_B1 SINE B4 20 155 -69 1 781 1126 86 0 0 chr17 25691410 25691550 -69581101 + B1_Mus1 SINE Alu 2 141 -7 1 781 454 341 27 27 chr17 25691591 25691775 -69580876 + B3A SINE B2 4 187 -11 1 781 371 209 0 0 chr17 25691796 25691863 -69580788 + ID_B1 SINE B4 145 211 -13 1 781 923 127 27 34 chr17 25691885 25692032 -69580619 - B1_Mus1 SINE Alu 0 148 3 1 781 261 0 0 0 chr17 25694419 25694448 -69578203 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 781 1506 211 58 120 chr17 25694697 25694941 -69577710 - MTD LTR MaLR 0 419 196 1 781 1204 62 7 0 chr17 25694941 25695087 -69577564 - B1_Mus1 SINE Alu 0 148 2 1 781 1506 211 58 120 chr17 25695087 25695274 -69577377 - MTD LTR MaLR -224 195 15 1 781 669 191 8 17 chr17 25695463 25695825 -69576826 + (TGGA)n Simple_repeat Simple_repeat 1 358 0 1 781 261 149 45 0 chr17 25695934 25696001 -69576650 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 1 781 1213 229 51 113 chr17 25696524 25696913 -69575738 - MTE2b LTR MaLR -14 365 1 1 781 421 168 231 9 chr17 25699678 25699786 -69572865 + B1_Mm SINE Alu 1 132 -15 1 781 432 0 0 0 chr17 25699787 25699835 -69572816 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 1 781 779 91 16 0 chr17 25699865 25699986 -69572665 + (GAAA)n Simple_repeat Simple_repeat 3 125 0 1 781 1271 9 26 18 chr17 25701971 25702200 -69570451 + (CA)n Simple_repeat Simple_repeat 1 231 0 1 781 23 33 0 0 chr17 25702851 25702881 -69569770 + AT_rich Low_complexity Low_complexity 1 30 0 1 781 225 0 0 0 chr17 25702966 25702991 -69569660 + (A)n Simple_repeat Simple_repeat 1 25 0 1 781 24 32 0 0 chr17 25703705 25703736 -69568915 + AT_rich Low_complexity Low_complexity 1 31 0 1 781 279 0 0 0 chr17 25705621 25705652 -69566999 + (T)n Simple_repeat Simple_repeat 1 31 0 1 781 231 167 0 0 chr17 25706282 25706324 -69566327 + (CCA)n Simple_repeat Simple_repeat 1 42 0 1 781 24 0 0 0 chr17 25707318 25707342 -69565309 + GC_rich Low_complexity Low_complexity 1 24 0 1 781 676 59 20 0 chr17 25708804 25708906 -69563745 + (TC)n Simple_repeat Simple_repeat 1 104 0 1 781 338 0 24 0 chr17 25708908 25708950 -69563701 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 781 234 0 0 0 chr17 25712931 25712957 -69559694 + (T)n Simple_repeat Simple_repeat 1 26 0 2 781 198 0 0 0 chr17 25713238 25713260 -69559391 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 781 501 259 27 0 chr17 25713381 25713493 -69559158 + PB1D7 SINE Alu 1 115 -5 2 781 233 250 43 29 chr17 25713971 25714041 -69558610 - L1M4 LINE L1 -325 5859 5789 2 781 265 236 0 0 chr17 25714052 25714107 -69558544 - PB1D7 SINE Alu -65 55 1 2 781 264 309 24 24 chr17 25714107 25714135 -69558516 - ID_B1 SINE B4 -88 136 54 2 781 189 0 0 0 chr17 25715101 25715122 -69557529 + (A)n Simple_repeat Simple_repeat 1 21 0 2 781 234 0 0 0 chr17 25715331 25715357 -69557294 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2 781 976 137 7 20 chr17 25717079 25717228 -69555423 - B1_Mur3 SINE Alu -1 148 2 2 781 1160 52 0 0 chr17 25718054 25718189 -69554462 + B1_Mus2 SINE Alu 2 136 -11 2 781 198 0 0 0 chr17 25718193 25718215 -69554436 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 2 781 389 245 10 31 chr17 25718610 25718707 -69553944 + PB1D10 SINE Alu 21 115 -2 2 781 316 304 70 23 chr17 25719791 25719919 -69552732 - L1MC LINE L1 -1081 5065 4932 2 781 412 211 14 21 chr17 25720351 25720496 -69552155 + CT-rich Low_complexity Low_complexity 1 144 0 2 781 2546 77 12 0 chr17 25720521 25720844 -69551807 - ORR1A2 LTR MaLR 0 327 1 2 781 267 319 34 40 chr17 25720844 25721038 -69551613 - L1MC LINE L1 -1381 4765 4583 2 781 198 0 0 0 chr17 25721189 25721211 -69551440 + (T)n Simple_repeat Simple_repeat 1 22 0 2 781 893 136 0 0 chr17 25721211 25721351 -69551300 - B1_Mus1 SINE Alu 0 148 9 2 781 274 327 46 93 chr17 25721351 25721595 -69551056 - L1MC LINE L1 -1771 4375 4144 2 781 1277 177 190 65 chr17 25721782 25722151 -69550500 + MTD LTR MaLR 5 419 0 2 781 286 203 17 0 chr17 25723323 25723382 -69549269 - MTEb LTR MaLR 0 379 320 2 781 459 0 0 0 chr17 25723405 25723456 -69549195 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 781 264 338 14 0 chr17 25723471 25723545 -69549106 - B4A SINE B4 -170 122 48 2 781 209 122 0 24 chr17 25723555 25723597 -69549054 + (TTTTG)n Simple_repeat Simple_repeat 3 43 0 2 781 1164 82 0 0 chr17 25723597 25723743 -69548908 - B1_Mus1 SINE Alu 0 148 3 2 781 435 254 132 0 chr17 25724109 25724223 -69548428 + B1_Mur2 SINE Alu 12 140 -9 2 781 330 300 107 38 chr17 25724245 25724536 -69548115 - L1MB7 LINE L1 -57 6127 5817 2 781 1382 168 127 152 chr17 25724624 25724905 -69547746 - ORR1C2 LTR MaLR 0 384 97 2 781 578 194 153 0 chr17 25724905 25725029 -69547622 - B1_Mus2 SINE Alu 0 147 5 2 781 1382 168 127 152 chr17 25725029 25725141 -69547510 - ORR1C2 LTR MaLR -288 96 1 2 781 948 238 54 5 chr17 25725895 25726098 -69546553 + B3 SINE B2 3 215 -1 2 781 1072 94 0 26 chr17 25727812 25727953 -69544698 + B1_Mur4 SINE Alu 1 138 -12 2 781 450 0 0 0 chr17 25727953 25728003 -69544648 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 781 1072 94 0 26 chr17 25728003 25728014 -69544637 + B1_Mur4 SINE Alu 139 149 -1 2 781 813 209 39 17 chr17 25728014 25728194 -69544457 + B3 SINE B2 29 212 -4 2 781 948 25 98 16 chr17 25728291 25728414 -69544237 - B1_Mus2 SINE Alu -14 133 1 2 781 324 278 8 57 chr17 25728617 25728739 -69543912 - PB1D10 SINE Alu -1 116 1 2 781 243 0 0 0 chr17 25731551 25731578 -69541073 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 781 318 207 159 11 chr17 25731693 25731781 -69540870 + PB1D7 SINE Alu 11 111 -9 2 781 241 243 53 13 chr17 25731808 25731883 -69540768 + B1F SINE Alu 13 90 -59 2 781 307 278 0 43 chr17 25732964 25733045 -69539606 - RSINE1 SINE B4 0 165 87 2 781 669 25 0 0 chr17 25733045 25733124 -69539527 + (TTTC)n Simple_repeat Simple_repeat 4 82 0 2 781 307 278 0 43 chr17 25733124 25733136 -69539515 - RSINE1 SINE B4 -79 86 76 2 781 702 340 27 58 chr17 25733140 25733568 -69539083 - MTD LTR MaLR -14 405 3 2 781 497 270 30 59 chr17 25735178 25735347 -69537304 - RSINE1 SINE B4 0 165 2 2 781 232 326 51 36 chr17 25736872 25737009 -69535642 - L1MD3 LINE L1 -302 7693 7555 2 781 491 262 19 56 chr17 25738142 25738394 -69534257 + B4 SINE B4 1 292 0 2 781 791 182 15 0 chr17 25740100 25740237 -69532414 + B1_Mur3 SINE Alu 1 139 -10 2 781 273 273 90 10 chr17 25740875 25740975 -69531676 - MER3 DNA MER1_type -27 182 75 2 781 307 302 58 21 chr17 25741494 25741640 -69531011 - L1MEe LINE L1 -2942 3204 3072 2 781 354 256 67 0 chr17 25741642 25741732 -69530919 - PB1D7 SINE Alu -8 112 17 2 781 450 252 54 61 chr17 25742380 25742528 -69530123 + B1F SINE Alu 3 149 0 2 781 594 0 0 0 chr17 25744724 25744790 -69527861 + (TC)n Simple_repeat Simple_repeat 1 66 0 2 781 621 146 93 65 chr17 25744791 25744930 -69527721 - B1_Mur3 SINE Alu -1 148 6 2 781 413 106 24 0 chr17 25744936 25745021 -69527630 + (TCTCTG)n Simple_repeat Simple_repeat 2 88 0 2 781 424 275 29 44 chr17 25745090 25745227 -69527424 - ID_B1 SINE B4 -20 204 70 2 781 202 235 13 93 chr17 25746691 25746766 -69525885 + MIR3 SINE MIR 110 178 -30 2 781 402 21 0 0 chr17 25749460 25749507 -69523144 + (GGCTG)n Simple_repeat Simple_repeat 3 49 0 2 781 307 271 23 23 chr17 25750510 25750597 -69522054 - MTD LTR MaLR -332 87 1 2 781 292 256 34 0 chr17 25752815 25752918 -69519733 + PB1D10 SINE Alu 10 117 -32 2 781 1614 193 120 15 chr17 25752993 25753335 -69519316 - ORR1C1 LTR MaLR 0 378 1 2 781 23 33 0 0 chr17 25753349 25753379 -69519272 + AT_rich Low_complexity Low_complexity 1 30 0 2 781 214 37 0 0 chr17 25753438 25753465 -69519186 - B1_Mus2 SINE Alu -111 36 10 2 781 788 181 20 27 chr17 25753474 25753622 -69519029 - B1_Mur2 SINE Alu -1 148 2 2 781 439 196 8 8 chr17 25753788 25753922 -69518729 + (CA)n Simple_repeat Simple_repeat 1 134 0 2 781 677 185 6 0 chr17 25753973 25754151 -69518500 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 781 1164 28 0 0 chr17 25755237 25755381 -69517270 + (TG)n Simple_repeat Simple_repeat 2 145 0 2 781 27 29 0 0 chr17 25756027 25756061 -69516590 + AT_rich Low_complexity Low_complexity 1 34 0 2 781 577 212 17 17 chr17 25756189 25756304 -69516347 + PB1D9 SINE Alu 2 116 -4 2 781 205 262 0 0 chr17 25756593 25756635 -69516016 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 781 243 190 0 0 chr17 25756653 25756711 -69515940 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 781 763 332 41 33 chr17 25756964 25757356 -69515295 + L1M5 LINE L1 3346 3740 -2406 2 781 672 159 35 0 chr17 25757713 25757858 -69514793 + GA-rich Low_complexity Low_complexity 5 154 0 2 781 708 112 79 16 chr17 25757861 25757988 -69514663 + B1_Mus2 SINE Alu 12 146 -1 2 781 221 300 0 0 chr17 25758111 25758161 -69514490 + B1_Mur3 SINE Alu 2 51 -98 2 781 492 315 106 25 chr17 25758324 25758404 -69514247 + L1M5 LINE L1 4242 4322 -1824 2 781 1035 157 151 0 chr17 25758404 25758440 -69514211 - B3 SINE B2 -2 214 165 2 781 242 56 0 27 chr17 25758440 25758477 -69514174 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 781 1035 157 151 0 chr17 25758477 25758625 -69514026 - B3 SINE B2 -52 164 3 2 781 492 315 106 25 chr17 25758625 25758941 -69513710 + L1M5 LINE L1 4323 4669 -1477 2 781 1251 54 0 0 chr17 25759223 25759371 -69513280 - B1_Mus1 SINE Alu 0 148 1 2 781 2044 172 110 11 chr17 25764938 25765319 -69507332 - MTD LTR MaLR 0 419 1 2 781 385 330 60 16 chr17 25765452 25765637 -69507014 + MLT1A0 LTR MaLR 153 345 -20 2 781 549 42 0 0 chr17 25765730 25765801 -69506850 - L1Md_A LINE L1 0 6582 6512 2 781 1199 37 0 50 chr17 25765949 25766959 -69505692 + (TGGA)n Simple_repeat Simple_repeat 1 959 0 2 781 291 269 59 12 chr17 25766989 25767158 -69505493 + (TGGA)n Simple_repeat Simple_repeat 4 180 0 2 781 469 259 62 14 chr17 25767803 25767948 -69504703 - B4A SINE B4 -31 261 110 2 781 978 272 65 58 chr17 25768031 25768308 -69504343 - B4 SINE B4 -13 279 1 2 781 228 217 129 32 chr17 25768346 25768408 -69504243 + tRNA-Ala-GCY_ tRNA tRNA 4 71 -4 2 781 318 211 17 9 chr17 25772162 25772277 -69500374 + CT-rich Low_complexity Low_complexity 2 117 0 2 781 579 259 43 0 chr17 25773543 25773682 -69498969 + RSINE1 SINE B4 17 161 -4 2 781 739 157 104 0 chr17 25774719 25774853 -69497798 - B1_Mur2 SINE Alu 0 149 2 2 781 325 341 56 47 chr17 25775673 25775967 -69496684 - L1MEf LINE L1 -3268 3051 2748 2 781 333 68 0 0 chr17 25775982 25776026 -69496625 + (GA)n Simple_repeat Simple_repeat 1 44 0 2 781 408 326 185 79 chr17 25776368 25776579 -69496072 - L1MEf LINE L1 -4124 2291 2109 2 781 873 107 0 0 chr17 25776579 25776719 -69495932 + (TG)n Simple_repeat Simple_repeat 2 141 0 2 781 408 326 185 79 chr17 25776719 25776896 -69495755 - L1MEf LINE L1 -4307 2108 1900 2 781 582 247 24 48 chr17 25776896 25777062 -69495589 + RSINE1 SINE B4 3 164 -1 2 781 408 326 185 79 chr17 25777062 25777498 -69495153 - L1MEf LINE L1 -4516 1899 1380 2 781 317 294 142 8 chr17 25777716 25777843 -69494808 - L1MEf LINE L1 -5144 1256 1113 2 781 896 261 105 31 chr17 25777981 25778333 -69494318 - L1M4c LINE L1 -4117 2267 1890 2 781 1015 137 14 0 chr17 25779431 25779577 -69493074 + B1_Mus1 SINE Alu 1 148 0 2 781 353 22 0 21 chr17 25779583 25779630 -69493021 + (GGGA)n Simple_repeat Simple_repeat 1 46 0 2 781 1028 94 17 12 chr17 25779630 25779803 -69492848 + (GAAA)n Simple_repeat Simple_repeat 1 174 0 2 781 189 121 0 0 chr17 25782017 25782050 -69490601 + (CCCCAG)n Simple_repeat Simple_repeat 4 36 0 2 781 398 330 0 0 chr17 25782585 25782694 -69489957 - PB1D10 SINE Alu -2 115 7 2 781 424 278 0 9 chr17 25782710 25782819 -69489832 - PB1D10 SINE Alu -7 110 3 2 781 468 286 50 25 chr17 25782844 25783132 -69489519 - L1M5 LINE L1 -2191 3955 3667 2 781 1352 246 38 51 chr17 25786073 25786446 -69486205 + MTEa LTR MaLR 2 369 -10 2 781 655 325 110 6 chr17 25787191 25787528 -69485123 - MLT2B1 LTR ERVL -102 418 47 2 781 355 237 65 0 chr17 25787586 25787679 -69484972 + PB1D10 SINE Alu 15 113 -4 2 781 573 249 109 145 chr17 25787788 25787981 -69484670 - B3A SINE B2 -6 189 4 2 781 190 73 24 24 chr17 25788115 25788157 -69484494 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 2 781 584 126 126 0 chr17 25788157 25788252 -69484399 - PB1D9 SINE Alu -13 107 1 2 781 361 257 103 19 chr17 25788300 25788407 -69484244 - PB1D10 SINE Alu 0 117 2 2 781 181 292 0 53 chr17 25793638 25793714 -69478937 + MER5A DNA MER1_type 96 167 -22 3 781 1276 34 0 0 chr17 25794437 25794584 -69478067 + B1_Mus2 SINE Alu 1 147 0 3 781 356 73 36 0 chr17 25794584 25794639 -69478012 + (GAAAA)n Simple_repeat Simple_repeat 2 58 0 3 781 405 262 10 10 chr17 25796854 25796958 -69475693 - B4 SINE B4 -97 195 92 3 781 180 0 0 0 chr17 25796958 25796978 -69475673 + (TATG)n Simple_repeat Simple_repeat 4 23 0 3 781 1140 111 0 0 chr17 25796983 25797163 -69475488 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 781 1080 195 28 32 chr17 25797245 25797462 -69475189 + B3 SINE B2 1 216 0 3 781 378 283 26 9 chr17 25798154 25798268 -69474383 + L1MD1 LINE L1 5844 5959 -283 3 781 1260 231 120 22 chr17 25798403 25798770 -69473881 - MTD LTR MaLR -14 405 3 3 781 414 0 0 0 chr17 25798900 25798946 -69473705 + (CACAC)n Simple_repeat Simple_repeat 1 46 0 3 781 282 195 318 11 chr17 25801162 25801250 -69471401 - PB1D10 SINE Alu -2 115 1 3 781 869 281 30 11 chr17 25802912 25803175 -69469476 + B4A SINE B4 25 292 0 3 781 305 210 0 46 chr17 25803184 25803249 -69469402 + PB1D7 SINE Alu 59 120 0 3 781 390 205 244 32 chr17 25803422 25803578 -69469073 - B3A SINE B2 -9 189 1 3 781 256 212 15 0 chr17 25803704 25803770 -69468881 + RSINE1 SINE B4 99 165 0 3 781 744 231 37 74 chr17 25803927 25804142 -69468509 + B3 SINE B2 1 207 -9 3 781 243 204 0 0 chr17 25804234 25804288 -69468363 + (ATGGTG)n Simple_repeat Simple_repeat 4 57 0 3 781 332 172 151 79 chr17 25806045 25806171 -69466480 + MLT1C LTR MaLR 7 148 -319 3 781 342 0 0 0 chr17 25806181 25806219 -69466432 + (TTTG)n Simple_repeat Simple_repeat 4 41 0 3 781 259 254 14 43 chr17 25806225 25806295 -69466356 - PB1D9 SINE Alu -11 109 42 3 781 503 165 0 0 chr17 25806295 25806374 -69466277 + (TCTCTG)n Simple_repeat Simple_repeat 2 80 0 3 781 298 189 209 11 chr17 25806414 25806505 -69466146 + PB1D10 SINE Alu 1 109 -8 3 781 231 280 0 0 chr17 25806592 25806642 -69466009 + polypurine Low_complexity Low_complexity 2 51 0 3 781 262 265 97 10 chr17 25806753 25806856 -69465795 + MLT1C LTR MaLR 353 464 -3 3 781 1949 171 52 25 chr17 25807204 25807606 -69465045 + MTC LTR MaLR 1 413 -8 3 781 749 86 248 0 chr17 25807950 25808067 -69464584 + B1_Mus1 SINE Alu 3 148 0 3 781 193 109 43 0 chr17 25808628 25808674 -69463977 + GA-rich Low_complexity Low_complexity 1 48 0 3 781 240 35 0 0 chr17 25808675 25808704 -69463947 + (CAGA)n Simple_repeat Simple_repeat 4 32 0 3 781 216 208 240 40 chr17 25810449 25810524 -69462127 - PB1D10 SINE Alu -27 90 1 3 781 224 230 62 47 chr17 25810467 25810531 -69462120 - B4 SINE B4 -149 143 79 3 781 314 328 72 22 chr17 25810531 25810712 -69461939 + L1MB8 LINE L1 5795 5984 -194 3 781 258 212 38 36 chr17 25811117 25811373 -69461278 + RMER17D LTR ERVK 267 526 -283 3 781 668 205 178 0 chr17 25811305 25811490 -69461161 + ORR1D1 LTR MaLR 157 374 0 3 781 468 174 0 44 chr17 25811561 25811651 -69461000 - PB1D9 SINE Alu -32 88 3 3 781 282 348 17 40 chr17 25811651 25811729 -69460922 - B4 SINE B4 -209 83 12 3 781 270 339 28 45 chr17 25811855 25812031 -69460620 + YREP_Mm Unknown Unknown 132 304 -1508 3 781 657 297 39 0 chr17 25811901 25812083 -69460568 - ID_B1 SINE B4 -2 222 34 3 781 944 219 138 84 chr17 25812086 25812455 -69460196 + MTD LTR MaLR 31 419 0 3 781 303 293 117 37 chr17 25812563 25812726 -69459925 + L1MC LINE L1 2864 3039 -3107 3 781 793 54 54 0 chr17 25812840 25812989 -69459662 + (CCAA)n Simple_repeat Simple_repeat 4 160 0 3 781 1513 64 5 0 chr17 25813125 25813312 -69459339 + B2_Mm1a SINE B2 1 188 -5 3 781 1005 171 53 16 chr17 25813429 25813619 -69459032 + B3A SINE B2 1 197 -1 3 781 407 280 30 22 chr17 25813757 25813892 -69458759 - ID_B1 SINE B4 -8 216 81 3 781 423 0 0 0 chr17 25813901 25813948 -69458703 + (GA)n Simple_repeat Simple_repeat 2 48 0 3 781 274 304 9 29 chr17 25814064 25814169 -69458482 + (CATATA)n Simple_repeat Simple_repeat 6 108 0 3 781 743 243 0 20 chr17 25814714 25814865 -69457786 + B1_Mur3 SINE Alu 1 148 -1 3 781 529 266 158 0 chr17 25814872 25815011 -69457640 + RSINE1 SINE B4 3 163 -2 3 781 286 304 13 0 chr17 25815232 25815311 -69457340 - ID4_ SINE ID -3 80 1 3 781 225 0 0 0 chr17 25815517 25815542 -69457109 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 3 781 333 0 0 0 chr17 25815564 25815601 -69457050 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 781 674 252 25 19 chr17 25815638 25815800 -69456851 - RSINE1 SINE B4 0 165 3 3 781 231 220 0 0 chr17 25816676 25816726 -69455925 - B1F1 SINE Alu -94 55 6 3 781 352 228 130 0 chr17 25819056 25819148 -69453503 + PB1D10 SINE Alu 1 104 -13 3 781 616 193 8 25 chr17 25819164 25819286 -69453365 + PB1D9 SINE Alu 1 120 0 3 781 458 225 0 29 chr17 25819329 25819434 -69453217 + PB1D7 SINE Alu 19 120 0 3 781 916 73 0 42 chr17 25819781 25819923 -69452728 + B1_Mus1 SINE Alu 13 148 0 3 781 402 134 0 0 chr17 25819923 25819990 -69452661 + (GGA)n Simple_repeat Simple_repeat 3 69 0 3 781 1057 161 130 5 chr17 25820020 25820220 -69452431 - URR1A DNA MER1_type -1 225 1 3 781 425 189 147 16 chr17 25820334 25820463 -69452188 + MTE2a LTR MaLR 204 349 -30 3 781 1161 75 7 0 chr17 25820468 25820614 -69452037 - B1_Mus1 SINE Alu 0 148 2 3 782 482 282 117 17 chr17 25821242 25821422 -69451229 + B4 SINE B4 73 270 -22 3 782 284 254 15 15 chr17 25822090 25822158 -69450493 + ID4 SINE ID 5 72 -11 3 782 228 135 0 0 chr17 25822293 25822330 -69450321 + (TCCCC)n Simple_repeat Simple_repeat 5 41 0 3 782 477 90 0 0 chr17 25822853 25822920 -69449731 + (TC)n Simple_repeat Simple_repeat 2 68 0 3 782 531 0 0 0 chr17 25823131 25823190 -69449461 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 782 476 303 7 22 chr17 25823192 25823327 -69449324 - RSINE1 SINE B4 -17 148 16 3 782 309 354 53 15 chr17 25823542 25823674 -69448977 - RMER13B LTR ERVK -45 863 727 3 782 860 310 38 21 chr17 25824004 25824291 -69448360 - B4 SINE B4 0 292 1 3 782 401 274 0 45 chr17 25824310 25824421 -69448230 - PB1D10 SINE Alu -11 106 1 3 782 432 0 0 0 chr17 25824711 25824759 -69447892 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 782 285 324 44 44 chr17 25824762 25824875 -69447776 - RSINE1 SINE B4 -18 147 35 3 782 198 67 67 0 chr17 25824886 25824931 -69447720 + (TTTTTG)n Simple_repeat Simple_repeat 2 49 0 3 782 185 296 19 0 chr17 25825759 25825813 -69446838 + L2 LINE L2 1471 1525 -1894 3 782 1114 127 31 26 chr17 25826237 25826431 -69446220 - B2_Mm2 SINE B2 0 195 1 3 782 794 265 39 10 chr17 25827051 25827257 -69445394 - B3 SINE B2 0 216 5 3 782 294 29 0 0 chr17 25827267 25827302 -69445349 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 3 782 472 279 58 7 chr17 25827302 25827439 -69445212 - RSINE1 SINE B4 -1 164 21 3 782 298 82 66 0 chr17 25827460 25827521 -69445130 + (TCTCTG)n Simple_repeat Simple_repeat 4 68 0 3 782 369 0 0 0 chr17 25827543 25827584 -69445067 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 782 1189 246 43 38 chr17 25827768 25828140 -69444511 - MTEa LTR MaLR 0 379 6 3 782 229 172 31 0 chr17 25828154 25828218 -69444433 + (CACCAT)n Simple_repeat Simple_repeat 5 70 0 3 782 680 214 6 34 chr17 25828218 25828397 -69444254 + HAL1-2a_MD LINE L1 2345 2518 -506 3 782 219 257 0 0 chr17 25828402 25828476 -69444175 + (CAT)n Simple_repeat Simple_repeat 1 74 0 3 782 198 396 44 0 chr17 25828511 25828602 -69444049 - MIRb SINE MIR -64 204 110 3 782 182 299 101 22 chr17 25830017 25830106 -69442545 - L2a LINE L2 -60 3366 3271 3 782 201 158 0 0 chr17 25830564 25830602 -69442049 + T-rich Low_complexity Low_complexity 1 38 0 3 782 3503 49 5 0 chr17 25830623 25831049 -69441602 - L1Md_F2 LINE L1 0 6582 6155 3 782 924 47 0 0 chr17 25831058 25831165 -69441486 - U6 snRNA snRNA 0 107 1 3 782 405 0 0 0 chr17 25831299 25831344 -69441307 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 782 186 43 0 0 chr17 25831472 25831495 -69441156 + (TTTC)n Simple_repeat Simple_repeat 3 25 0 3 782 1310 109 5 25 chr17 25831497 25831695 -69440956 - B2_Mm2 SINE B2 -1 194 1 3 782 589 158 8 40 chr17 25831953 25832078 -69440573 - ID_B1 SINE B4 0 224 104 3 782 513 263 57 38 chr17 25832163 25832321 -69440330 - RSINE1 SINE B4 -4 161 1 3 782 333 0 0 0 chr17 25832379 25832416 -69440235 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 3 782 342 269 39 41 chr17 25832416 25832561 -69440090 - PB1D10 SINE Alu -11 138 2 3 782 526 184 92 0 chr17 25832860 25832969 -69439682 + B3A SINE B2 3 121 -77 3 782 246 32 0 0 chr17 25832969 25833000 -69439651 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 782 21 0 0 0 chr17 25833000 25833021 -69439630 + AT_rich Low_complexity Low_complexity 1 21 0 3 782 1628 52 0 5 chr17 25833034 25833228 -69439423 + B2_Mm1a SINE B2 1 193 0 3 782 366 146 12 24 chr17 25834027 25834111 -69438540 + GA-rich Low_complexity Low_complexity 3 85 0 3 782 227 290 29 0 chr17 25834119 25834188 -69438463 + ID4_ SINE ID 3 73 -10 3 782 778 132 8 8 chr17 25834471 25834601 -69438050 + B1_Mus2 SINE Alu 18 147 0 4 782 330 87 0 0 chr17 25834628 25834674 -69437977 + (GGA)n Simple_repeat Simple_repeat 2 47 0 4 782 624 253 82 0 chr17 25834796 25834942 -69437709 + B3A SINE B2 3 160 -38 4 782 396 0 0 0 chr17 25834980 25835024 -69437627 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 782 249 308 142 40 chr17 25835318 25835494 -69437157 + Charlie1a DNA MER1_type 1245 1438 -17 4 782 195 42 0 0 chr17 25836529 25836553 -69436098 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 4 782 2262 177 45 38 chr17 25837582 25838000 -69434651 - MTC LTR MaLR 0 421 1 4 782 780 159 151 18 chr17 25838168 25838334 -69434317 + B2_Mm2 SINE B2 2 189 -6 4 782 1202 50 0 0 chr17 25838552 25838693 -69433958 - B1_Mus2 SINE Alu -6 141 1 4 782 795 274 26 0 chr17 25838857 25839047 -69433604 - B4 SINE B4 0 292 98 4 782 416 186 274 0 chr17 25839052 25839165 -69433486 - MT2A LTR ERVL -3 530 387 4 782 12177 154 64 18 chr17 25839168 25840391 -69432260 - MERVL_2A-int LTR ERVL -3367 2394 1123 4 782 1613 31 0 20 chr17 25840391 25840588 -69432063 + B2_Mm1a SINE B2 1 193 0 4 782 12177 154 64 18 chr17 25840588 25841651 -69431000 - MERVL_2A-int LTR ERVL -4639 1122 1 4 782 474 209 84 15 chr17 25841672 25841716 -69430935 - MT2B LTR ERVL -6 595 552 4 782 501 127 0 0 chr17 25841716 25841795 -69430856 + (CAGA)n Simple_repeat Simple_repeat 2 80 0 4 782 474 244 91 42 chr17 25841795 25841967 -69430684 - MT2B LTR ERVL -50 551 317 4 782 1245 49 18 0 chr17 25842927 25843090 -69429561 + B2_Mm2 SINE B2 4 169 -26 4 782 198 0 0 0 chr17 25843093 25843115 -69429536 + (GA)n Simple_repeat Simple_repeat 1 22 0 4 782 330 307 23 0 chr17 25843115 25843203 -69429448 - MT2B LTR ERVL -134 467 378 4 782 1190 54 0 26 chr17 25844150 25844301 -69428350 - B1_Mm SINE Alu 0 147 1 4 782 428 157 0 0 chr17 25844616 25844686 -69427965 + B4 SINE B4 2 71 -221 4 782 647 179 0 57 chr17 25844695 25844819 -69427832 + MT2A LTR ERVL 1 117 -416 4 782 1808 131 103 43 chr17 25844821 25845171 -69427480 - ORR1C2 LTR MaLR -1 383 13 4 782 1269 48 0 0 chr17 25845173 25845320 -69427331 - B1_Mm SINE Alu 0 147 1 4 782 9636 34 5 8 chr17 25845474 25846664 -69425987 + ETnERV-int LTR ERVK 1988 3174 -140 4 782 2573 133 10 20 chr17 25847533 25847931 -69424720 + ORR1B1 LTR MaLR 1 394 0 4 782 369 0 0 0 chr17 25848549 25848590 -69424061 + (A)n Simple_repeat Simple_repeat 1 41 0 4 782 297 284 30 40 chr17 25849537 25849636 -69423015 - B1F SINE Alu -51 98 1 4 782 833 138 7 0 chr17 25849936 25850081 -69422570 + (TA)n Simple_repeat Simple_repeat 2 147 0 4 782 748 336 13 43 chr17 25850084 25850240 -69422411 - B4A SINE B4 -2 290 140 4 782 1653 181 91 55 chr17 25850240 25850603 -69422048 - ORR1C2 LTR MaLR -4 380 5 4 782 748 336 13 43 chr17 25850603 25850745 -69421906 - B4A SINE B4 -153 139 1 4 782 557 221 48 35 chr17 25851509 25851654 -69420997 - B1_Mur2 SINE Alu -1 148 2 4 782 198 0 0 0 chr17 25851854 25851876 -69420775 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 782 395 213 150 0 chr17 25851889 25852002 -69420649 - B1_Mur1 SINE Alu -19 130 1 4 782 1162 68 7 0 chr17 25852279 25852425 -69420226 + B1_Mus1 SINE Alu 1 147 -1 4 782 1205 62 0 0 chr17 25861739 25861885 -69410766 - B1_Mm SINE Alu 0 147 2 4 782 1470 144 14 0 chr17 25862019 25862241 -69410410 + URR1B DNA MER1_type 1 225 0 4 782 258 32 0 0 chr17 25866457 25866488 -69406163 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 4 782 534 200 49 24 chr17 25866488 25866611 -69406040 - B1_Mus2 SINE Alu -21 126 1 4 782 253 293 109 20 chr17 25866647 25866748 -69405903 + ID_B1 SINE B4 82 191 -33 4 782 409 228 11 0 chr17 25866726 25866818 -69405833 + RSINE1 SINE B4 29 121 -44 4 782 677 103 0 111 chr17 25866829 25867000 -69405651 + B1_Mur1 SINE Alu 10 131 -18 4 782 186 43 0 0 chr17 25867000 25867023 -69405628 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 782 475 39 0 181 chr17 25867023 25867039 -69405612 + B1_Mur4 SINE Alu 130 145 -5 4 782 221 236 18 0 chr17 25868912 25868967 -69403684 + MIR3 SINE MIR 104 159 -49 4 782 618 233 30 111 chr17 25869527 25869725 -69402926 + ID_B1 SINE B4 36 217 -7 4 782 515 289 63 63 chr17 25869738 25869951 -69402700 + B4 SINE B4 2 215 -77 4 782 1277 40 0 0 chr17 25869951 25870099 -69402552 + B1_Mus1 SINE Alu 1 148 0 4 782 234 253 0 0 chr17 25870191 25870274 -69402377 + (CA)n Simple_repeat Simple_repeat 2 84 0 4 782 320 281 6 0 chr17 25870309 25870487 -69402164 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 782 328 254 50 14 chr17 25871251 25871392 -69401259 + MIRb SINE MIR 45 196 -72 4 782 363 227 13 0 chr17 25871648 25871723 -69400928 + ID4 SINE ID 4 79 -4 4 782 229 176 44 0 chr17 25875672 25875740 -69396911 + GA-rich Low_complexity Low_complexity 1 71 0 4 782 439 314 138 19 chr17 25876627 25876997 -69395654 + L1MC LINE L1 2436 2849 -3297 4 782 1135 65 0 0 chr17 25876997 25877135 -69395516 - B1_Mur4 SINE Alu -12 138 1 4 782 1206 182 0 28 chr17 25877159 25877374 -69395277 - B3 SINE B2 -6 210 2 4 782 324 288 12 0 chr17 25877393 25877473 -69395178 - ID_B1 SINE B4 -1 223 143 4 782 992 249 5 14 chr17 25877485 25877697 -69394954 - B3 SINE B2 -5 211 2 4 782 287 282 136 0 chr17 25877815 25877918 -69394733 + PB1D10 SINE Alu 1 117 0 4 782 1086 64 50 0 chr17 25878014 25878154 -69394497 - B1_Mm SINE Alu 0 147 1 4 782 426 320 87 0 chr17 25878160 25878310 -69394341 + RSINE1 SINE B4 1 163 -2 4 782 1143 75 0 20 chr17 25878652 25878802 -69393849 + B1_Mus2 SINE Alu 1 147 0 4 782 380 38 38 0 chr17 25879035 25879088 -69393563 + (GGGA)n Simple_repeat Simple_repeat 4 58 0 4 782 679 224 21 14 chr17 25879212 25879357 -69393294 - B1_Mur2 SINE Alu 0 149 4 4 782 933 48 16 0 chr17 25881155 25881280 -69391371 + B1_Mus2 SINE Alu 21 147 0 4 782 189 0 0 0 chr17 25881280 25881301 -69391350 + (A)n Simple_repeat Simple_repeat 1 21 0 4 782 24 0 0 0 chr17 25882071 25882095 -69390556 + GC_rich Low_complexity Low_complexity 1 24 0 4 782 677 291 124 17 chr17 25882180 25882421 -69390230 + B4A SINE B4 3 269 -23 4 782 321 89 0 0 chr17 25882421 25882466 -69390185 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 782 442 188 205 0 chr17 25882470 25882582 -69390069 + RSINE1 SINE B4 27 161 -4 4 782 24 0 0 0 chr17 25882585 25882609 -69390042 + AT_rich Low_complexity Low_complexity 1 24 0 4 782 384 284 150 51 chr17 25882646 25882880 -69389771 - MLT1B LTR MaLR -77 313 57 4 782 265 282 0 8 chr17 25883364 25883452 -69389199 - B1F SINE Alu 0 149 35 4 782 230 291 0 0 chr17 25883449 25883504 -69389147 + PB1D10 SINE Alu 15 69 -48 4 782 539 293 0 7 chr17 25884131 25884272 -69388379 + B1F SINE Alu 3 142 -7 4 782 1024 158 38 43 chr17 25884282 25884467 -69388184 + B2_Mm2 SINE B2 1 184 -11 4 782 231 221 23 11 chr17 25884468 25884555 -69388096 + (TATATG)n Simple_repeat Simple_repeat 3 90 0 4 782 340 253 0 12 chr17 25884574 25884658 -69387993 + BC1_Mm scRNA scRNA 9 91 -61 4 782 1234 41 7 0 chr17 25887455 25887600 -69385051 + B1_Mus2 SINE Alu 1 146 -1 4 782 535 166 6 6 chr17 25888968 25889126 -69383525 + (CA)n Simple_repeat Simple_repeat 2 159 0 4 782 288 0 0 0 chr17 25890053 25890085 -69382566 + (CCTG)n Simple_repeat Simple_repeat 3 34 0 4 782 738 286 343 19 chr17 25893356 25893871 -69378780 - MER54B LTR ERVL 0 793 112 4 782 360 0 0 0 chr17 25894699 25894739 -69377912 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 782 482 157 79 0 chr17 25895053 25895142 -69377509 - RSINE1 SINE B4 -61 104 9 4 782 582 220 21 83 chr17 25895143 25895287 -69377364 - B1_Mur1 SINE Alu -14 135 1 4 782 684 216 0 0 chr17 25895292 25895417 -69377234 - ID_B1 SINE B4 0 224 100 4 782 430 300 115 0 chr17 25895436 25895566 -69377085 + RSINE1 SINE B4 11 155 -10 4 782 245 293 20 20 chr17 25895591 25895692 -69376959 - Cheshire DNA MER1_type -256 2164 2064 4 782 233 307 271 16 chr17 25895718 25895910 -69376741 - Cheshire DNA MER1_type -551 1869 1629 4 782 244 274 83 64 chr17 25896253 25896362 -69376289 + RMER15 LTR ERVL 346 456 -119 4 782 712 95 9 0 chr17 25896363 25896468 -69376183 + B1_Mus2 SINE Alu 29 134 -13 4 782 339 105 0 0 chr17 25896498 25896555 -69376096 + (GGAA)n Simple_repeat Simple_repeat 4 60 0 4 782 279 278 0 0 chr17 25896715 25896787 -69375864 - Cheshire DNA MER1_type -774 1646 1575 4 782 399 252 10 48 chr17 25896788 25896892 -69375759 + B1F SINE Alu 1 100 -49 4 782 519 287 119 50 chr17 25897157 25897476 -69375175 - Cheshire DNA MER1_type -1161 1259 919 4 782 283 292 37 6 chr17 25897488 25897597 -69375054 - PB1D10 SINE Alu 0 117 8 4 782 245 301 0 27 chr17 25897581 25897656 -69374995 - B4 SINE B4 -4 288 216 4 782 504 100 0 0 chr17 25897656 25897736 -69374915 + (TTGG)n Simple_repeat Simple_repeat 4 83 0 4 782 766 143 88 29 chr17 25897762 25897899 -69374752 - B1_Mur3 SINE Alu 0 149 5 4 782 280 254 0 27 chr17 25897913 25897986 -69374665 - B1_Mur1 SINE Alu 0 149 79 4 782 333 0 0 0 chr17 25898015 25898052 -69374599 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 782 295 302 79 0 chr17 25898060 25898186 -69374465 - RSINE1 SINE B4 -27 138 3 4 782 259 158 354 0 chr17 25898193 25898275 -69374376 - B4A SINE B4 -73 219 109 4 782 474 303 163 42 chr17 25898321 25898628 -69374023 - Cheshire DNA MER1_type -1483 937 594 4 782 295 169 75 38 chr17 25899024 25899104 -69373547 - B1_Mur3 SINE Alu 0 149 67 4 782 664 319 5 5 chr17 25899165 25899357 -69373294 + B3 SINE B2 11 202 -14 4 782 252 302 23 0 chr17 25899365 25899451 -69373200 + BC1_Mm scRNA scRNA 5 92 -60 4 782 268 250 75 0 chr17 25899457 25899537 -69373114 + PB1D10 SINE Alu 32 117 0 4 782 280 164 36 0 chr17 25899483 25899538 -69373113 + ID_B1 SINE B4 168 224 0 4 782 265 0 49 24 chr17 25899539 25899580 -69373071 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 5 782 2070 148 14 82 chr17 25899662 25900089 -69372562 + RMER10B LTR ERVL 1 398 0 5 782 257 200 0 127 chr17 25900161 25900224 -69372427 + PB1D9 SINE Alu 59 113 -7 5 782 1152 82 0 7 chr17 25900362 25900510 -69372141 + B1_Mus1 SINE Alu 2 148 0 5 782 431 254 47 47 chr17 25900519 25900668 -69371983 + B3A SINE B2 50 198 0 5 782 253 275 29 0 chr17 25900710 25900779 -69371872 + PB1 SINE Alu 24 94 -33 5 782 264 111 0 0 chr17 25900964 25901009 -69371642 + (T)n Simple_repeat Simple_repeat 1 45 0 5 782 1110 88 0 0 chr17 25901011 25901158 -69371493 - B1_Mus2 SINE Alu 0 147 1 5 782 263 293 141 89 chr17 25901390 25901525 -69371126 - B4A SINE B4 -148 144 3 5 782 24 32 0 0 chr17 25901570 25901601 -69371050 + AT_rich Low_complexity Low_complexity 1 31 0 5 782 260 127 18 0 chr17 25901609 25901664 -69370987 + (TA)n Simple_repeat Simple_repeat 1 56 0 5 782 23 33 0 0 chr17 25901680 25901710 -69370941 + AT_rich Low_complexity Low_complexity 1 30 0 5 782 694 259 46 6 chr17 25901718 25901897 -69370754 + B3A SINE B2 6 185 -10 5 782 859 165 15 0 chr17 25901906 25902039 -69370612 + B1_Mus2 SINE Alu 1 135 -12 5 782 441 0 0 0 chr17 25902039 25902088 -69370563 + (TAAAA)n Simple_repeat Simple_repeat 4 52 0 5 782 828 184 29 0 chr17 25902134 25902270 -69370381 + B1_Mus2 SINE Alu 2 141 -6 5 782 264 59 0 0 chr17 25902271 25902305 -69370346 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 5 782 646 235 95 7 chr17 25902392 25902529 -69370122 - B1_Mur2 SINE Alu 0 149 1 5 782 1128 51 0 42 chr17 25902544 25902688 -69369963 + B1_Mus1 SINE Alu 2 139 -9 5 782 210 37 0 0 chr17 25902688 25902715 -69369936 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 5 782 351 0 0 0 chr17 25902733 25902772 -69369879 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 5 782 551 240 25 88 chr17 25903584 25903744 -69368907 + ID_B1 SINE B4 72 221 -3 5 782 798 222 85 25 chr17 25904585 25904784 -69367867 - ID_B1 SINE B4 0 224 14 5 782 216 314 29 0 chr17 25904723 25904793 -69367858 - BC1_Mm scRNA scRNA -77 75 4 5 782 317 218 103 0 chr17 25904805 25904883 -69367768 - PB1D10 SINE Alu -7 110 25 5 782 784 262 100 206 chr17 25905003 25905226 -69367425 - MTD LTR MaLR -1 418 188 5 782 1065 88 0 20 chr17 25905226 25905377 -69367274 - B1_Mus1 SINE Alu 0 148 1 5 782 784 262 100 206 chr17 25905377 25905463 -69367188 - MTD LTR MaLR -232 187 117 5 782 1039 116 0 33 chr17 25905463 25905615 -69367036 + B1_Mur4 SINE Alu 4 150 0 5 782 784 262 100 206 chr17 25905615 25905766 -69366885 - MTD LTR MaLR -303 116 6 5 782 255 304 131 26 chr17 25905823 25906111 -69366540 + MLT1B LTR MaLR 144 467 0 5 782 243 0 0 0 chr17 25906595 25906622 -69366029 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 782 661 122 17 0 chr17 25906622 25906737 -69365914 + (GA)n Simple_repeat Simple_repeat 2 118 0 5 782 318 306 82 75 chr17 25906985 25907144 -69365507 + RSINE1 SINE B4 3 162 -3 5 782 959 242 24 9 chr17 25907184 25907397 -69365254 - B3 SINE B2 0 216 1 5 782 1200 94 11 6 chr17 25907405 25907587 -69365064 - L1_Mus3 LINE L1 -6 6632 6450 5 782 1007 16 0 0 chr17 25907603 25907728 -69364923 - B1_Mm SINE Alu -21 126 2 5 782 464 217 39 100 chr17 25907728 25907824 -69364827 - MT2B LTR ERVL -408 176 153 5 782 281 175 0 31 chr17 25907830 25907895 -69364756 - L1MB8 LINE L1 -1 6177 6115 5 782 223 325 26 13 chr17 25907904 25907982 -69364669 + PB1D10 SINE Alu 7 85 -32 5 782 659 157 9 0 chr17 25908005 25908113 -69364538 + B1_Mur4 SINE Alu 42 150 0 5 782 1124 82 0 14 chr17 25908116 25908264 -69364387 + B1_Mus1 SINE Alu 1 146 -2 5 782 239 119 48 48 chr17 25908274 25908336 -69364315 + A-rich Low_complexity Low_complexity 4 65 0 5 782 911 95 21 42 chr17 25908385 25908528 -69364123 + B2_Mm2 SINE B2 2 141 -54 5 782 504 284 131 28 chr17 25908604 25908876 -69363775 - B4A SINE B4 -2 290 10 5 782 1087 88 0 0 chr17 25908876 25909013 -69363638 + B1_Mus2 SINE Alu 1 137 -10 5 782 255 31 0 0 chr17 25909013 25909045 -69363606 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 5 782 964 150 0 26 chr17 25909109 25909260 -69363391 + B1_Mur3 SINE Alu 1 147 -2 5 782 428 250 87 34 chr17 25909340 25909489 -69363162 - L1MB8 LINE L1 -214 5964 5808 5 782 3613 104 34 25 chr17 25909658 25910210 -69362441 + Lx LINE L1 6098 6654 0 5 782 230 380 9 0 chr17 25913335 25913448 -69359203 + BC1_Mm scRNA scRNA 2 115 -37 5 782 1286 27 0 0 chr17 25913488 25913634 -69359017 - B1_Mus1 SINE Alu 0 148 3 5 782 1188 54 0 7 chr17 25913682 25913831 -69358820 + B1_Mus1 SINE Alu 1 148 0 5 782 371 186 175 0 chr17 25914723 25914820 -69357831 - B1F SINE Alu -1 148 35 5 782 577 269 74 0 chr17 25914901 25915050 -69357601 - RSINE1 SINE B4 -4 161 2 5 782 255 276 139 12 chr17 25915465 25915630 -69357021 - MER54A LTR ERVL -607 294 109 5 782 354 138 0 0 chr17 25916269 25916327 -69356324 + (T)n Simple_repeat Simple_repeat 1 58 0 5 782 1206 91 91 6 chr17 25922806 25922982 -69349669 + B2_Mm2 SINE B2 1 191 -4 5 782 619 57 0 22 chr17 25922986 25923076 -69349575 + BC1_Mm scRNA scRNA 1 88 -64 5 782 982 115 24 12 chr17 25923081 25923248 -69349403 + URR1B DNA MER1_type 57 225 0 5 782 356 285 52 31 chr17 25923248 25923264 -69349387 - CYRA11_Mm Unknown Y-chromosome -269 287 153 5 782 1292 14 7 0 chr17 25925337 25925483 -69347168 + B1_Mm SINE Alu 1 147 0 5 782 1127 68 0 39 chr17 25927129 25927282 -69345369 + B1_Mus1 SINE Alu 2 148 0 5 782 466 243 75 0 chr17 25928047 25928154 -69344497 + ID_B1 SINE B4 1 115 -109 5 782 191 61 30 0 chr17 25931543 25931576 -69341075 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 782 30 0 0 0 chr17 25933747 25933777 -69338874 + AT_rich Low_complexity Low_complexity 1 30 0 5 782 23 33 0 0 chr17 25933971 25934001 -69338650 + GC_rich Low_complexity Low_complexity 1 30 0 5 782 750 288 10 10 chr17 25934724 25934931 -69337720 + ID_B1 SINE B4 5 211 -13 5 782 663 34 0 0 chr17 25934972 25935060 -69337591 - L1_Mus3 LINE L1 -7 6631 6544 5 782 360 0 0 0 chr17 25935205 25935245 -69337406 + (TC)n Simple_repeat Simple_repeat 1 40 0 5 782 1467 74 21 5 chr17 25935547 25935738 -69336913 + B2_Mm2 SINE B2 2 195 0 5 782 793 167 0 35 chr17 25935973 25936116 -69336535 + B1_Mur3 SINE Alu 2 139 -10 5 782 249 33 0 0 chr17 25936117 25936147 -69336504 + (CAAA)n Simple_repeat Simple_repeat 4 33 0 5 782 564 248 0 39 chr17 25936401 25936556 -69336095 + MTE-int LTR MaLR 1242 1390 -190 5 782 1169 71 0 0 chr17 25936653 25936794 -69335857 + B1_Mm SINE Alu 2 142 -5 5 782 292 51 0 92 chr17 25936798 25936863 -69335788 + (TAAA)n Simple_repeat Simple_repeat 1 59 0 5 782 360 260 29 20 chr17 25936882 25936984 -69335667 + B1_Mur1 SINE Alu 32 134 -15 5 782 854 183 21 0 chr17 25937009 25937151 -69335500 + B1_Mur3 SINE Alu 5 149 0 5 782 698 178 37 0 chr17 25937162 25937297 -69335354 + B1_Mur2 SINE Alu 10 149 0 5 782 28 0 0 0 chr17 25937298 25937326 -69335325 + AT_rich Low_complexity Low_complexity 1 28 0 5 782 658 259 19 58 chr17 25937337 25937511 -69335140 + B3A SINE B2 2 173 -25 5 782 243 0 0 0 chr17 25937511 25937538 -69335113 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 782 658 259 19 58 chr17 25937538 25937568 -69335083 + B3A SINE B2 174 198 0 5 782 1056 128 0 20 chr17 25937588 25937740 -69334911 + B1_Mur4 SINE Alu 1 149 -1 5 782 216 0 0 0 chr17 25937749 25937773 -69334878 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 5 782 446 88 2 0 chr17 25937812 25937883 -69334768 + B1_Mus2 SINE Alu 1 72 -77 5 782 393 244 0 0 chr17 25937883 25937894 -69334757 + B4 SINE B4 86 167 -125 5 782 857 161 6 45 chr17 25938690 25938846 -69333805 + B1_Mur4 SINE Alu 1 150 0 5 782 534 70 0 0 chr17 25938871 25938942 -69333709 + (GGAA)n Simple_repeat Simple_repeat 3 73 0 5 782 201 158 26 0 chr17 25938970 25939008 -69333643 + (TGGA)n Simple_repeat Simple_repeat 3 41 0 5 782 329 263 88 0 chr17 25939019 25939133 -69333518 - MTD LTR MaLR -295 124 1 5 782 260 292 0 62 chr17 25940418 25940531 -69332120 + GA-rich Low_complexity Low_complexity 6 111 0 5 782 295 102 343 20 chr17 25941541 25941643 -69331008 - B2_Mm2 SINE B2 -14 181 47 5 782 1234 91 11 69 chr17 25941675 25941863 -69330788 - B2_Mm1t SINE B2 -14 179 3 5 782 731 317 54 129 chr17 25942215 25942353 -69330298 - RLTR18 LTR ERVK -9 607 492 5 782 1554 57 0 15 chr17 25942353 25942549 -69330102 - B2_Mm2 SINE B2 -1 194 2 5 782 731 317 54 129 chr17 25942549 25942632 -69330019 - RLTR18 LTR ERVK -125 491 411 5 782 1542 69 0 5 chr17 25942632 25942821 -69329830 - B2_Mm2 SINE B2 -7 188 1 5 782 731 317 54 129 chr17 25942821 25942904 -69329747 - RLTR18 LTR ERVK -206 410 347 5 782 1134 145 48 5 chr17 25942904 25943091 -69329560 + B2_Mm2 SINE B2 1 195 0 5 782 731 317 54 129 chr17 25943091 25943436 -69329215 - RLTR18 LTR ERVK -270 346 5 5 782 521 315 18 123 chr17 25943697 25943803 -69328848 + B4 SINE B4 2 86 -206 5 782 1167 64 0 0 chr17 25943803 25943944 -69328707 + B1_Mus2 SINE Alu 1 141 -6 5 782 521 315 18 123 chr17 25943944 25944065 -69328586 + B4 SINE B4 87 205 -87 5 782 273 119 0 0 chr17 25944080 25944122 -69328529 + (A)n Simple_repeat Simple_repeat 1 42 0 5 782 636 141 0 39 chr17 25944271 25944426 -69328225 + RMER17B LTR ERVK 312 460 -498 5 782 180 152 0 0 chr17 25944427 25944460 -69328191 + A-rich Low_complexity Low_complexity 1 33 0 5 782 1186 132 16 32 chr17 25944484 25944672 -69327979 + B2_Mm2 SINE B2 3 187 -8 5 782 704 12 12 0 chr17 25944698 25944783 -69327868 + (TC)n Simple_repeat Simple_repeat 1 86 0 6 782 243 103 0 0 chr17 25944783 25944821 -69327830 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 782 479 17 17 0 chr17 25944880 25944940 -69327711 + (CA)n Simple_repeat Simple_repeat 1 61 0 6 782 201 321 23 8 chr17 25945919 25946051 -69326600 + G-rich Low_complexity Low_complexity 1 134 0 6 782 244 242 0 16 chr17 25945986 25946049 -69326602 + GA-rich Low_complexity Low_complexity 1 62 0 6 782 26 0 0 0 chr17 25946179 25946205 -69326446 + GC_rich Low_complexity Low_complexity 1 26 0 6 782 356 233 174 0 chr17 25949850 25949936 -69322715 + PB1D7 SINE Alu 1 101 -19 6 782 315 0 0 0 chr17 25951053 25951088 -69321563 + (T)n Simple_repeat Simple_repeat 1 35 0 6 783 451 211 349 0 chr17 25952367 25952519 -69320132 + B3 SINE B2 3 207 -9 6 783 686 154 85 0 chr17 25952634 25952764 -69319887 - B1_Mus1 SINE Alu 0 148 8 6 783 214 320 125 107 chr17 25952637 25952669 -69319982 - B4A SINE B4 -68 224 130 6 783 390 241 18 44 chr17 25952669 25952782 -69319869 - MT2B LTR ERVL -337 264 155 6 783 214 320 125 107 chr17 25952782 25952805 -69319846 - B4A SINE B4 -68 129 54 6 783 952 75 88 22 chr17 25952920 25953056 -69319595 + B1_Mus2 SINE Alu 3 147 0 6 783 539 40 14 0 chr17 25957739 25957813 -69314838 + (GA)n Simple_repeat Simple_repeat 2 76 0 6 783 24 0 0 0 chr17 25958171 25958195 -69314456 + AT_rich Low_complexity Low_complexity 1 24 0 6 783 1158 77 0 0 chr17 25958453 25958596 -69314055 + B1_Mus1 SINE Alu 5 147 -1 6 783 319 172 69 0 chr17 25958604 25958662 -69313989 + L1MEg LINE L1 2040 2101 -4141 6 783 581 300 22 35 chr17 25958760 25958987 -69313664 + B3A SINE B2 4 216 0 6 783 2265 177 51 21 chr17 25959071 25959539 -69313112 + RLTR28 LTR ERVL 41 522 -2 6 783 912 63 158 0 chr17 25960021 25960148 -69312503 + B1_Mus1 SINE Alu 2 148 0 6 783 364 257 191 0 chr17 25960148 25960284 -69312367 + L1MEg LINE L1 2008 2110 -4132 6 783 285 29 0 0 chr17 25960376 25960410 -69312241 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 6 783 261 57 0 0 chr17 25965827 25965862 -69306789 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 783 229 149 43 0 chr17 25974025 25974072 -69298579 + (CTCCG)n Simple_repeat Simple_repeat 5 53 0 6 783 1082 211 5 23 chr17 25975426 25975644 -69297007 + B3 SINE B2 1 214 -2 6 783 571 125 9 9 chr17 25975649 25975754 -69296897 + (GAAA)n Simple_repeat Simple_repeat 1 105 0 6 783 1023 72 85 0 chr17 25979676 25979829 -69292822 + B2_Mm2 SINE B2 2 167 -28 6 783 1010 59 89 0 chr17 25979856 25979991 -69292660 - B1_Mus2 SINE Alu 0 147 1 6 783 342 0 0 0 chr17 25980604 25980642 -69292009 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 783 311 299 123 0 chr17 25984237 25984391 -69288260 + L1MB7 LINE L1 5784 5956 -228 6 783 782 172 234 12 chr17 25985723 25985894 -69286757 + B3 SINE B2 1 209 -7 6 783 690 211 8 30 chr17 25987914 25988046 -69284605 + B1_Mur1 SINE Alu 1 129 -20 6 783 1391 175 146 22 chr17 25990271 25990593 -69282058 + MTD LTR MaLR 13 374 -45 6 783 1127 60 0 0 chr17 25991176 25991309 -69281342 + B1_Mus2 SINE Alu 2 134 -13 6 783 276 260 63 25 chr17 25993029 25993108 -69279543 + ID4 SINE ID 1 82 -1 6 783 347 127 0 34 chr17 25993182 25993256 -69279395 - B1_Mur1 SINE Alu -8 141 70 6 783 1336 69 35 0 chr17 25993362 25993535 -69279116 - B2_Mm2 SINE B2 -16 179 1 6 783 309 291 133 14 chr17 25993541 25993613 -69279038 + L1MEf LINE L1 1923 2007 -4193 6 783 1004 124 28 0 chr17 25993613 25993758 -69278893 + B1_Mur4 SINE Alu 2 150 0 6 783 309 291 133 14 chr17 25993758 25993828 -69278823 + L1MEf LINE L1 2008 2082 -4118 6 783 577 0 0 27 chr17 25994507 25994582 -69278069 + (CA)n Simple_repeat Simple_repeat 2 74 0 6 783 603 273 43 11 chr17 25994854 25995039 -69277612 + B3A SINE B2 2 192 -6 6 783 250 236 0 18 chr17 25995050 25995106 -69277545 + B3A SINE B2 1 55 -143 6 783 622 121 111 8 chr17 25995108 25995225 -69277426 - B1_Mus1 SINE Alu -19 129 1 6 783 1431 60 44 0 chr17 25995232 25995414 -69277237 - B2_Mm2 SINE B2 -5 190 1 6 783 545 185 112 30 chr17 25999143 25999277 -69273374 - B1_Mur2 SINE Alu 0 149 5 6 783 586 153 0 10 chr17 25999480 25999579 -69273072 - B1_Mus2 SINE Alu -1 146 49 6 783 280 92 487 0 chr17 25999847 25999923 -69272728 + PB1D9 SINE Alu 7 119 -1 6 783 213 65 0 0 chr17 25999925 25999956 -69272695 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 6 783 695 255 14 0 chr17 26000073 26000218 -69272433 + B1_Mur1 SINE Alu 3 149 0 1 783 1203 48 0 20 chr17 26000220 26000369 -69272282 + B1_Mm SINE Alu 2 147 0 2 783 325 77 46 0 chr17 26000369 26000434 -69272217 + (CAAAA)n Simple_repeat Simple_repeat 2 69 0 3 783 303 286 0 61 chr17 26000465 26000547 -69272104 + ID4_ SINE ID 3 79 -4 4 783 255 79 0 0 chr17 26002351 26002389 -69270262 + (CAGGG)n Simple_repeat Simple_repeat 1 38 0 5 783 997 119 0 7 chr17 26002784 26002928 -69269723 - B1_Mus2 SINE Alu 0 147 5 6 783 1153 37 0 0 chr17 26004227 26004361 -69268290 + B1_Mus2 SINE Alu 2 135 -12 7 783 1171 68 0 0 chr17 26006426 26006572 -69266079 - B1_Mus1 SINE Alu -1 147 2 8 783 373 197 271 16 chr17 26006943 26007072 -69265579 - RMER15 LTR ERVL -87 488 327 9 783 1530 53 21 0 chr17 26007109 26007297 -69265354 + B2_Mm2 SINE B2 1 192 -3 1 783 954 48 94 8 chr17 26007307 26007434 -69265217 + B1_Mus1 SINE Alu 1 138 -10 1 783 279 0 0 0 chr17 26007434 26007465 -69265186 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 783 486 0 0 0 chr17 26007678 26007732 -69264919 + (GAAA)n Simple_repeat Simple_repeat 1 54 0 1 783 4075 66 19 4 chr17 26007739 26008255 -69264396 + L1_Mus1 LINE L1 6044 6567 0 1 783 1251 48 0 0 chr17 26008277 26008422 -69264229 + B1_Mm SINE Alu 2 146 -1 1 783 890 85 8 0 chr17 26008455 26008584 -69264067 + (GAAA)n Simple_repeat Simple_repeat 2 131 0 1 783 351 0 0 0 chr17 26008584 26008623 -69264028 + (GGGA)n Simple_repeat Simple_repeat 1 39 0 1 783 207 0 0 0 chr17 26008799 26008822 -69263829 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 1 783 831 146 7 46 chr17 26008822 26008963 -69263688 - B1_Mur4 SINE Alu -13 137 2 1 783 338 257 108 11 chr17 26009568 26009772 -69262879 + MLT1D LTR MaLR 148 493 -12 2 783 1094 42 0 0 chr17 26010604 26010746 -69261905 + B1_Mm SINE Alu 6 147 0 2 783 203 0 37 0 chr17 26010778 26010805 -69261846 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2 783 616 57 400 0 chr17 26013737 26013842 -69258809 + B1_Mus2 SINE Alu 1 147 0 2 783 292 142 18 88 chr17 26014369 26014539 -69258112 + G-rich Low_complexity Low_complexity 5 162 0 2 783 516 214 52 22 chr17 26017675 26017809 -69254842 + B1F2 SINE Alu 12 149 0 2 783 565 260 0 16 chr17 26023223 26023363 -69249288 + B1F SINE Alu 6 143 -7 2 783 1249 61 0 0 chr17 26023372 26023520 -69249131 + B1_Mus1 SINE Alu 1 148 0 2 783 1560 185 63 65 chr17 26023527 26023909 -69248742 + ORR1C2 LTR MaLR 1 381 -3 2 783 736 274 39 10 chr17 26025296 26025502 -69247149 - B3 SINE B2 -3 213 2 2 783 804 158 28 14 chr17 26025557 26025698 -69246953 + B1_Mur4 SINE Alu 1 143 -7 3 783 580 112 214 0 chr17 26025721 26025819 -69246832 + PB1D9 SINE Alu 2 120 0 3 783 234 310 94 39 chr17 26025912 26026057 -69246594 + B3A SINE B2 2 155 -43 3 783 414 0 0 0 chr17 26026057 26026103 -69246548 + (TC)n Simple_repeat Simple_repeat 1 46 0 3 783 376 255 112 99 chr17 26026103 26026118 -69246533 + RSINE1 SINE B4 151 165 0 3 783 234 310 94 39 chr17 26026118 26026138 -69246513 + B3A SINE B2 156 192 -6 3 783 429 20 0 0 chr17 26026138 26026188 -69246463 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 3 783 309 51 0 0 chr17 26026189 26026228 -69246423 + (GA)n Simple_repeat Simple_repeat 2 40 0 3 783 335 333 9 9 chr17 26026233 26026345 -69246306 + PB1D7 SINE Alu 2 113 -7 3 783 1041 199 46 0 chr17 26026354 26026550 -69246101 + B3 SINE B2 1 205 -11 3 783 326 296 12 0 chr17 26027386 26027467 -69245184 + ID2 SINE ID 2 83 0 3 783 545 264 63 21 chr17 26027714 26027857 -69244794 - B1_Mur2 SINE Alu 0 149 1 4 783 709 177 65 59 chr17 26027859 26028053 -69244598 - B3 SINE B2 -4 194 1 4 783 922 117 20 27 chr17 26028677 26028826 -69243825 - B1_Mus1 SINE Alu 0 148 1 4 783 539 308 7 20 chr17 26029206 26029352 -69243299 + ID_B1 SINE B4 81 224 0 4 783 277 267 28 19 chr17 26029529 26029636 -69243015 + L1M4 LINE L1 5137 5244 -902 4 783 249 108 0 0 chr17 26029636 26029673 -69242978 + (TTTTC)n Simple_repeat Simple_repeat 4 40 0 4 783 1266 41 0 0 chr17 26029673 26029819 -69242832 - B1_Mus2 SINE Alu 0 147 2 4 783 300 343 40 67 chr17 26029849 26029906 -69242745 + L1M4 LINE L1 5267 5322 -862 4 783 1152 69 7 0 chr17 26029906 26030051 -69242600 + B1_Mus1 SINE Alu 2 147 -1 4 783 300 343 40 67 chr17 26030051 26030218 -69242433 + L1M4 LINE L1 5323 5485 -699 4 783 525 236 19 111 chr17 26030346 26030508 -69242143 - B1_Mur4 SINE Alu -3 147 1 4 783 320 239 102 0 chr17 26030508 26030596 -69242055 - B1F2 SINE Alu -12 137 41 4 783 243 88 0 0 chr17 26030758 26030792 -69241859 + (ATTG)n Simple_repeat Simple_repeat 2 35 0 5 783 621 212 33 87 chr17 26030794 26030944 -69241707 - B1_Mur2 SINE Alu -1 148 7 5 783 327 295 7 103 chr17 26030834 26030970 -69241681 - B4 SINE B4 -100 192 70 5 783 826 191 28 0 chr17 26031649 26031790 -69240861 + B1_Mus2 SINE Alu 3 147 0 5 783 1107 139 42 11 chr17 26031829 26032018 -69240633 + B2_Mm2 SINE B2 1 195 0 5 783 1221 68 0 0 chr17 26032151 26032297 -69240354 + B1_Mus2 SINE Alu 2 147 0 5 783 740 126 16 0 chr17 26032297 26032424 -69240227 + (GAAA)n Simple_repeat Simple_repeat 1 129 0 5 783 180 0 0 0 chr17 26032422 26032442 -69240209 + (CAGT)n Simple_repeat Simple_repeat 2 21 0 5 783 405 0 0 0 chr17 26034169 26034214 -69238437 + (TTCC)n Simple_repeat Simple_repeat 1 45 0 5 783 499 122 22 0 chr17 26034214 26034304 -69238347 + (TC)n Simple_repeat Simple_repeat 1 92 0 5 783 1197 42 0 7 chr17 26034305 26034449 -69238202 - B1_Mm SINE Alu -4 143 1 6 783 629 286 36 0 chr17 26034847 26034987 -69237664 - RSINE1 SINE B4 -19 146 2 6 783 390 231 226 23 chr17 26035163 26035296 -69237355 + RSINE1 SINE B4 2 161 -4 6 783 790 132 23 15 chr17 26035334 26035465 -69237186 + B1_Mur1 SINE Alu 18 149 0 6 783 270 81 0 0 chr17 26035474 26035511 -69237140 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 6 783 1280 40 0 0 chr17 26035548 26035696 -69236955 - B1_Mus1 SINE Alu 0 148 1 6 783 758 253 5 75 chr17 26035818 26036019 -69236632 - B4A SINE B4 -104 188 2 6 783 282 160 0 0 chr17 26036124 26036174 -69236477 + CT-rich Low_complexity Low_complexity 1 50 0 6 783 449 204 183 0 chr17 26036174 26036267 -69236384 - PB1D10 SINE Alu -7 110 1 6 783 638 180 16 0 chr17 26036569 26036691 -69235960 - B1_Mus1 SINE Alu -1 147 24 6 783 311 194 55 12 chr17 26037117 26037222 -69235429 + B1F SINE Alu 12 148 -1 7 783 786 244 72 5 chr17 26037234 26037428 -69235223 + B3 SINE B2 1 207 -9 7 783 32 0 0 0 chr17 26038149 26038181 -69234470 + AT_rich Low_complexity Low_complexity 1 32 0 7 783 424 255 41 111 chr17 26038328 26038359 -69234292 + B4 SINE B4 63 218 -70 7 783 850 119 0 22 chr17 26038359 26038496 -69234155 + B1_Mus1 SINE Alu 9 142 -6 7 783 1510 43 5 21 chr17 26038563 26038751 -69233900 + B2_Mm1a SINE B2 2 186 -7 7 783 377 299 0 57 chr17 26039239 26039363 -69233288 + PB1D10 SINE Alu 1 117 0 7 783 373 320 136 44 chr17 26039450 26039656 -69232995 + MLT1E2 LTR MaLR 69 293 -334 7 783 252 354 63 0 chr17 26039676 26039803 -69232848 + MLT1E2 LTR MaLR 350 484 -143 7 783 338 0 24 0 chr17 26039809 26039851 -69232800 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 783 556 224 68 56 chr17 26040311 26040472 -69232179 - B3A SINE B2 0 198 36 7 783 639 107 78 0 chr17 26040482 26040585 -69232066 - B1_Mur3 SINE Alu -5 144 34 8 783 1177 41 0 46 chr17 26040719 26040855 -69231796 + B1_Mus2 SINE Alu 2 137 -10 8 783 189 0 0 0 chr17 26040855 26040876 -69231775 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 8 783 1177 41 0 46 chr17 26040876 26040892 -69231759 + B1_Mus2 SINE Alu 138 147 0 8 783 321 263 200 50 chr17 26041024 26041324 -69231327 + L1M5 LINE L1 5465 5809 -635 8 783 263 275 58 0 chr17 26041362 26041431 -69231220 + PB1D7 SINE Alu 33 105 -15 8 783 670 161 383 0 chr17 26041635 26041797 -69230854 - URR1B DNA MER1_type 0 225 2 8 783 350 165 105 25 chr17 26041860 26041978 -69230673 + B1F1 SINE Alu 6 148 -1 8 783 1167 95 0 0 chr17 26042055 26042203 -69230448 + B1_Mus1 SINE Alu 1 148 0 8 783 402 115 0 0 chr17 26042203 26042264 -69230387 + (GGAA)n Simple_repeat Simple_repeat 4 64 0 8 783 796 206 0 22 chr17 26042276 26042415 -69230236 + B1_Mur3 SINE Alu 1 136 -13 8 783 303 108 0 0 chr17 26043093 26043152 -69229499 + B1_Mm SINE Alu 89 147 0 9 783 652 162 76 56 chr17 26043235 26043379 -69229272 - B1_Mur2 SINE Alu 0 149 3 9 783 354 23 0 0 chr17 26043386 26043429 -69229222 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 9 783 1096 88 6 6 chr17 26043429 26043589 -69229062 - B2_Mm1a SINE B2 -33 160 1 9 783 564 250 158 0 chr17 26043614 26043778 -69228873 - B3 SINE B2 -25 191 2 9 783 499 271 0 60 chr17 26043857 26044006 -69228645 - RSINE1 SINE B4 -23 142 3 9 783 891 181 14 0 chr17 26044087 26044225 -69228426 - B1_Mus2 SINE Alu -7 140 1 9 783 813 157 64 0 chr17 26044232 26044372 -69228279 - B1_Mur2 SINE Alu 0 149 1 9 783 345 330 11 0 chr17 26044373 26044467 -69228184 + MER2 DNA MER2_type 251 345 0 9 783 1275 34 0 0 chr17 26045405 26045551 -69227100 + B1_Mus2 SINE Alu 2 147 0 9 783 1213 35 0 14 chr17 26045840 26045987 -69226664 - B1_Mm SINE Alu -1 146 2 1 783 627 145 49 9 chr17 26046047 26046179 -69226472 - B1_Mur3 SINE Alu -1 149 1 1 783 351 0 0 0 chr17 26046179 26046218 -69226433 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1 783 335 224 172 23 chr17 26046229 26046316 -69226335 - B1F2 SINE Alu -35 114 15 1 783 561 216 72 0 chr17 26046317 26046428 -69226223 + PB1D9 SINE Alu 1 119 -1 1 783 246 32 0 0 chr17 26046432 26046463 -69226188 + (CAA)n Simple_repeat Simple_repeat 2 32 0 1 783 1038 193 10 25 chr17 26046479 26046681 -69225970 + B3 SINE B2 18 216 0 1 783 24 0 0 0 chr17 26046687 26046711 -69225940 + AT_rich Low_complexity Low_complexity 1 24 0 1 783 681 157 65 36 chr17 26046711 26046850 -69225801 - B1_Mus1 SINE Alu 0 148 6 1 783 1568 47 11 0 chr17 26046884 26047074 -69225577 + B2_Mm1a SINE B2 2 193 0 1 783 461 195 113 8 chr17 26047095 26047219 -69225432 + B1_Mur1 SINE Alu 13 149 0 1 783 642 229 21 7 chr17 26047325 26047470 -69225181 + B1F1 SINE Alu 2 148 -1 1 783 534 244 148 12 chr17 26047492 26047654 -69224997 - B3A SINE B2 -10 188 5 1 783 984 140 15 84 chr17 26047820 26048023 -69224628 + B2_Mm2 SINE B2 1 189 -6 1 783 221 299 12 94 chr17 26048294 26048379 -69224272 + ID_B1 SINE B4 76 153 -71 1 783 811 175 20 20 chr17 26048379 26048525 -69224126 + B1_Mur3 SINE Alu 2 147 -2 1 783 3243 38 2 60 chr17 26049535 26049726 -69222925 + MTA_Mm LTR MaLR 1 191 -205 1 783 1237 21 14 14 chr17 26049726 26049873 -69222778 + B1_Mm SINE Alu 1 147 0 1 783 3243 38 2 60 chr17 26049873 26050101 -69222550 + MTA_Mm LTR MaLR 192 396 0 1 783 704 244 119 5 chr17 26050112 26050297 -69222354 - B3 SINE B2 -7 209 4 1 783 628 195 0 48 chr17 26051213 26051337 -69221314 + B1F2 SINE Alu 25 142 -7 1 783 317 237 140 0 chr17 26052265 26052358 -69220293 + PB1D10 SINE Alu 4 109 -8 1 783 1098 101 7 0 chr17 26052502 26052650 -69220001 + B1_Mur4 SINE Alu 1 149 -1 1 783 742 236 75 21 chr17 26052666 26052852 -69219799 + B3 SINE B2 1 196 -20 1 783 229 286 15 31 chr17 26052877 26052942 -69219709 + RSINE1 SINE B4 56 119 -46 1 783 186 43 0 0 chr17 26052963 26052986 -69219665 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1 783 1042 65 0 0 chr17 26052987 26053126 -69219525 - B1_Mus1 SINE Alu 0 148 10 1 783 924 156 14 0 chr17 26053140 26053281 -69219370 - B1_Mur2 SINE Alu -4 145 3 1 783 1174 88 0 0 chr17 26053358 26053505 -69219146 + B1_Mus1 SINE Alu 2 148 0 1 783 26 0 0 0 chr17 26053506 26053532 -69219119 + AT_rich Low_complexity Low_complexity 1 26 0 1 783 739 219 7 0 chr17 26054666 26054812 -69217839 - B1_Mus1 SINE Alu -1 147 1 1 783 260 53 0 26 chr17 26056608 26056647 -69216004 + (CCG)n Simple_repeat Simple_repeat 3 40 0 1 783 1208 68 0 0 chr17 26057783 26057930 -69214721 + B1_Mus2 SINE Alu 1 147 0 1 783 247 259 74 0 chr17 26058152 26058233 -69214418 + RSINE1 SINE B4 78 164 -1 1 783 375 78 0 0 chr17 26058290 26058341 -69214310 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 783 340 139 265 146 chr17 26058345 26058496 -69214155 + B3 SINE B2 47 215 -1 1 783 885 235 25 15 chr17 26058518 26058717 -69213934 + B3 SINE B2 3 203 -13 1 783 1145 100 100 0 chr17 26058806 26058976 -69213675 - B2_Mm2 SINE B2 -8 187 1 1 783 558 158 59 34 chr17 26059002 26059120 -69213531 + B1_Mus1 SINE Alu 28 148 0 1 783 421 273 101 0 chr17 26059385 26059479 -69213172 + B1F1 SINE Alu 11 114 -35 1 783 552 291 54 16 chr17 26059479 26059663 -69212988 + B3A SINE B2 1 184 -32 1 783 349 167 232 30 chr17 26060074 26060173 -69212478 + PB1D7 SINE Alu 1 119 -1 1 783 21 0 0 0 chr17 26060672 26060693 -69211958 + AT_rich Low_complexity Low_complexity 1 21 0 1 783 1247 41 0 0 chr17 26060698 26060844 -69211807 + B1_Mm SINE Alu 2 147 0 1 783 425 302 8 43 chr17 26061117 26061271 -69211380 + MLT2B3 LTR ERVL 1 150 -370 1 783 537 291 121 26 chr17 26061288 26061560 -69211091 + MLT1A LTR MaLR 76 373 -1 1 783 871 236 84 0 chr17 26061690 26061893 -69210758 + ID_B1 SINE B4 3 222 -2 1 783 950 63 0 0 chr17 26061900 26062026 -69210625 + B1_Mus2 SINE Alu 2 127 -20 1 783 258 0 23 45 chr17 26062027 26062071 -69210580 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 783 700 153 48 0 chr17 26062944 26063068 -69209583 + B1_Mur4 SINE Alu 7 136 -14 1 783 1198 124 69 37 chr17 26064130 26064348 -69208303 + URR1B DNA MER1_type 1 225 0 1 783 1347 75 0 4 chr17 26064988 26065214 -69207437 + (GGA)n Simple_repeat Simple_repeat 1 225 0 1 783 1269 41 0 0 chr17 26066141 26066287 -69206364 - B1_Mm SINE Alu 0 147 2 1 783 484 276 0 70 chr17 26066305 26066323 -69206328 + ID_B1 SINE B4 76 219 -4 1 783 830 162 0 7 chr17 26066323 26066460 -69206191 + B1_Mur4 SINE Alu 10 145 -5 1 783 690 194 14 36 chr17 26069909 26070048 -69202603 - B1_Mur2 SINE Alu -1 148 13 1 783 189 94 0 0 chr17 26070624 26070656 -69201995 + (TCTG)n Simple_repeat Simple_repeat 4 35 0 1 783 961 145 14 0 chr17 26070656 26070794 -69201857 - B1_Mur4 SINE Alu -8 142 3 1 783 21 0 0 0 chr17 26070955 26070976 -69201675 + AT_rich Low_complexity Low_complexity 1 21 0 1 783 352 204 2 0 chr17 26072404 26072473 -69200178 + PB1D9 SINE Alu 1 70 -57 1 783 267 207 44 89 chr17 26072473 26072485 -69200166 + MT2B LTR ERVL 185 238 -363 1 783 1258 41 0 0 chr17 26072757 26072903 -69199748 + B1_Mus2 SINE Alu 2 147 0 1 783 492 167 181 10 chr17 26073044 26073171 -69199480 + B1_Mur1 SINE Alu 3 147 -2 1 783 524 223 62 0 chr17 26073185 26073297 -69199354 + B3 SINE B2 4 122 -94 1 783 698 122 9 0 chr17 26073294 26073401 -69199250 - B1_Mus1 SINE Alu -40 108 1 1 783 293 263 53 0 chr17 26074796 26074872 -69197779 + PB1D10 SINE Alu 1 80 -37 1 783 448 288 7 52 chr17 26074884 26075038 -69197613 + B1F SINE Alu 2 148 -1 1 783 707 224 207 0 chr17 26075079 26075258 -69197393 + B3 SINE B2 1 216 0 1 783 317 316 0 0 chr17 26075279 26075358 -69197293 + ID4_ SINE ID 2 80 -3 1 783 1369 99 16 0 chr17 26075383 26075575 -69197076 + B2_Mm2 SINE B2 1 195 0 1 783 655 262 160 9 chr17 26075721 26075933 -69196718 + RMER21B LTR ERV1 324 567 -275 1 783 1258 62 78 72 chr17 26076268 26076461 -69196190 + B2_Mm2 SINE B2 1 194 -1 1 783 180 0 0 0 chr17 26078167 26078187 -69194464 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 783 754 248 64 5 chr17 26078199 26078402 -69194249 + ID_B1 SINE B4 3 217 -7 1 783 396 0 0 0 chr17 26079431 26079475 -69193176 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 783 210 37 0 0 chr17 26079856 26079883 -69192768 + (CCTG)n Simple_repeat Simple_repeat 2 28 0 1 783 222 91 0 0 chr17 26081349 26081382 -69191269 + (AGGGGG)n Simple_repeat Simple_repeat 2 34 0 1 783 465 66 0 0 chr17 26081621 26081682 -69190969 + (CCA)n Simple_repeat Simple_repeat 3 63 0 1 783 323 0 0 0 chr17 26081682 26081720 -69190931 + HAL1-3A_ME LINE L1 1976 2013 -845 1 783 1147 69 14 0 chr17 26082135 26082280 -69190371 - B1_Mus1 SINE Alu 0 148 2 1 784 1399 85 21 0 chr17 26085724 26085912 -69186739 - B2_Mm1t SINE B2 0 193 2 1 784 462 252 45 0 chr17 26085949 26086060 -69186591 + PB1D9 SINE Alu 5 120 0 1 784 772 60 0 0 chr17 26086064 26086164 -69186487 + B1_Mm SINE Alu 38 137 -10 1 784 1351 98 11 0 chr17 26086313 26086497 -69186154 + B2_Mm2 SINE B2 2 187 -8 1 784 1208 62 7 0 chr17 26086524 26086670 -69185981 - B1_Mm SINE Alu 0 147 1 1 784 180 0 0 0 chr17 26089732 26089752 -69182899 + (TCCC)n Simple_repeat Simple_repeat 2 21 0 1 784 215 91 91 0 chr17 26089755 26089799 -69182852 + (TCTG)n Simple_repeat Simple_repeat 1 48 0 1 784 1358 85 0 65 chr17 26090906 26091107 -69181544 - B2_Mm2 SINE B2 -3 192 5 1 784 1078 49 0 0 chr17 26091433 26091575 -69181076 - B1_Mus2 SINE Alu 0 147 6 1 784 21 0 0 0 chr17 26091652 26091673 -69180978 + GC_rich Low_complexity Low_complexity 1 21 0 1 784 278 243 6 55 chr17 26091854 26092037 -69180614 + (TG)n Simple_repeat Simple_repeat 1 174 0 1 784 321 210 6 54 chr17 26092137 26092303 -69180348 + (TG)n Simple_repeat Simple_repeat 1 158 0 1 784 405 0 0 0 chr17 26098271 26098316 -69174335 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 784 401 248 94 47 chr17 26098331 26098458 -69174193 - ID_B1 SINE B4 -13 211 79 1 784 272 200 14 0 chr17 26102011 26102081 -69170570 + CT-rich Low_complexity Low_complexity 4 74 0 1 784 586 238 0 32 chr17 26102598 26102724 -69169927 + MTEa LTR MaLR 3 124 -255 1 784 325 291 47 0 chr17 26102712 26102798 -69169853 - B1_Mur4 SINE Alu -50 100 11 1 784 396 238 0 12 chr17 26102809 26102890 -69169761 + MTEa LTR MaLR 109 188 -191 1 784 1061 117 0 7 chr17 26102938 26103084 -69169567 + B1_Mus2 SINE Alu 2 146 -1 1 784 1227 56 0 0 chr17 26103086 26103229 -69169422 + B1_Mus2 SINE Alu 1 143 -4 1 784 201 121 0 0 chr17 26103239 26103272 -69169379 + (A)n Simple_repeat Simple_repeat 1 33 0 1 784 442 315 0 9 chr17 26103306 26103418 -69169233 + RSINE1 SINE B4 53 163 -2 1 784 301 268 35 11 chr17 26103455 26103542 -69169109 + MTEa LTR MaLR 205 293 -86 1 784 513 310 180 19 chr17 26103579 26103895 -69168756 + ORR1D-int LTR MaLR 835 1201 -169 2 784 238 191 15 45 chr17 26103921 26103987 -69168664 + PB1D9 SINE Alu 1 64 -56 2 784 337 272 139 9 chr17 26104006 26104121 -69168530 + MTEa LTR MaLR 250 379 0 1 784 278 314 105 0 chr17 26105964 26105980 -69166671 - PB1D10 SINE Alu 0 117 3 2 784 316 341 0 0 chr17 26105980 26106068 -69166583 - ID_B1 SINE B4 -53 171 84 2 784 539 270 82 26 chr17 26106191 26106385 -69166266 - B3 SINE B2 -6 210 6 2 784 416 162 25 0 chr17 26106398 26106478 -69166173 - B1F1 SINE Alu -1 148 67 2 784 1095 89 0 6 chr17 26106481 26106650 -69166001 - B2_Mm2 SINE B2 0 195 28 2 784 1147 90 0 0 chr17 26106675 26106820 -69165831 - B1_Mus2 SINE Alu 0 147 3 2 784 235 73 0 47 chr17 26106821 26106864 -69165787 - B2_Mm2 SINE B2 -154 41 1 2 784 1122 92 0 0 chr17 26106884 26107026 -69165625 - B1_Mus1 SINE Alu -5 143 2 2 784 789 117 0 0 chr17 26107396 26107524 -69165127 + (CA)n Simple_repeat Simple_repeat 2 129 0 2 784 476 288 90 11 chr17 26107527 26107804 -69164847 + L1MB5 LINE L1 5391 5689 -495 2 784 428 148 135 29 chr17 26107873 26107977 -69164674 + B1_Mur3 SINE Alu 35 149 0 2 784 212 145 35 52 chr17 26107980 26108038 -69164613 + A-rich Low_complexity Low_complexity 2 58 0 2 784 255 61 0 0 chr17 26108123 26108156 -69164495 + (T)n Simple_repeat Simple_repeat 1 33 0 2 784 1181 74 0 0 chr17 26108156 26108304 -69164347 - B1_Mus1 SINE Alu 0 148 1 2 784 314 316 142 8 chr17 26108306 26108616 -69164035 + L1MB5 LINE L1 5778 6142 -36 2 784 2123 184 58 5 chr17 26108616 26109014 -69163637 + MTD LTR MaLR 1 419 0 2 784 275 324 167 11 chr17 26109014 26109050 -69163601 + L1MB5 LINE L1 6143 6178 0 2 784 216 0 0 0 chr17 26110415 26110439 -69162212 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 784 1094 82 0 39 chr17 26110760 26110913 -69161738 + B1_Mus1 SINE Alu 2 148 0 2 784 207 0 0 0 chr17 26110916 26110939 -69161712 + (A)n Simple_repeat Simple_repeat 1 23 0 2 784 396 266 35 0 chr17 26111808 26111921 -69160730 - PB1D10 SINE Alu 0 117 1 2 784 232 188 232 0 chr17 26111924 26111993 -69160658 + MER58B DNA MER1_type 152 236 -105 2 784 1409 60 16 0 chr17 26112231 26112415 -69160236 + B2_Mm2 SINE B2 2 188 -7 2 784 331 231 43 21 chr17 26112466 26112559 -69160092 + PB1D10 SINE Alu 22 116 -1 2 784 626 265 0 14 chr17 26112570 26112713 -69159938 + B3 SINE B2 9 151 -47 2 784 303 28 0 0 chr17 26112713 26112749 -69159902 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 784 536 301 37 21 chr17 26112749 26112792 -69159859 + B3A SINE B2 152 197 -1 2 784 322 266 38 0 chr17 26113015 26113094 -69159557 - PB1D10 SINE Alu 0 117 36 2 784 731 86 134 14 chr17 26113216 26113358 -69159293 - RMER4A LTR ERVK 0 466 308 2 784 1780 180 58 110 chr17 26113352 26113525 -69159126 - RMER4A LTR ERVK -9 457 323 2 784 673 93 246 0 chr17 26113525 26113643 -69159008 - B1_Mm SINE Alu 0 147 1 2 784 1780 180 58 110 chr17 26113643 26113951 -69158700 - RMER4A LTR ERVK -144 322 1 2 784 1547 36 0 10 chr17 26114118 26114312 -69158339 + B2_Mm1a SINE B2 2 193 0 2 784 301 241 48 0 chr17 26114977 26115060 -69157591 - ID_B1 SINE B4 -5 219 133 2 784 355 235 9 105 chr17 26118368 26118383 -69154268 + MT2B LTR ERVL 155 158 -443 2 784 576 164 29 0 chr17 26118383 26118488 -69154163 + B1_Mm SINE Alu 1 109 -40 2 784 252 0 0 0 chr17 26118488 26118516 -69154135 + (CAGC)n Simple_repeat Simple_repeat 1 28 0 2 784 771 112 0 0 chr17 26118516 26118641 -69154010 + (CA)n Simple_repeat Simple_repeat 1 125 0 2 784 1164 61 0 0 chr17 26119242 26119389 -69153262 - B1_Mus2 SINE Alu 0 147 1 2 784 26 30 0 0 chr17 26120858 26120891 -69151760 + AT_rich Low_complexity Low_complexity 1 33 0 2 784 225 137 23 5 chr17 26121155 26121223 -69151428 + MIRb SINE MIR 120 194 -82 2 784 1177 34 7 0 chr17 26123410 26123556 -69149095 + B1_Mm SINE Alu 1 147 0 2 784 227 155 17 17 chr17 26123557 26123616 -69149035 + A-rich Low_complexity Low_complexity 4 62 0 2 784 363 225 19 29 chr17 26124270 26124362 -69148289 + PB1D10 SINE Alu 24 120 -7 2 784 240 189 9 182 chr17 26124289 26124399 -69148252 + MT2B2 LTR ERVL 197 287 -297 2 784 439 158 83 65 chr17 26124379 26124487 -69148164 + PB1D9 SINE Alu 11 120 0 2 784 205 75 24 24 chr17 26126246 26126287 -69146364 + (TA)n Simple_repeat Simple_repeat 1 41 0 2 784 209 350 0 0 chr17 26126519 26126599 -69146052 + (CA)n Simple_repeat Simple_repeat 1 80 0 2 784 258 32 0 0 chr17 26127330 26127361 -69145290 + (TC)n Simple_repeat Simple_repeat 2 32 0 2 784 446 293 30 0 chr17 26129778 26129911 -69142740 - ID_B1 SINE B4 0 224 88 2 784 242 238 22 56 chr17 26130524 26130613 -69142038 - L1MC3 LINE L1 -854 6931 6846 2 784 275 352 0 87 chr17 26130657 26130772 -69141879 + RSINE1 SINE B4 32 136 -29 2 784 216 0 0 0 chr17 26130871 26130895 -69141756 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 784 688 161 43 21 chr17 26130898 26131038 -69141613 - B1_Mur4 SINE Alu -7 143 1 2 784 1291 79 17 6 chr17 26131579 26131757 -69140894 - B2_Mm2 SINE B2 -14 181 2 2 784 840 140 0 0 chr17 26132152 26132288 -69140363 + B1_Mur3 SINE Alu 14 149 0 2 784 271 200 92 0 chr17 26132874 26132939 -69139712 - PB1D7 SINE Alu -2 118 48 2 784 205 283 57 0 chr17 26133175 26133228 -69139423 + MIRb SINE MIR 126 181 -87 2 784 1179 34 0 20 chr17 26133520 26133531 -69139120 - B1_Mus2 SINE Alu 0 147 139 2 784 216 86 0 0 chr17 26133531 26133566 -69139085 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 784 1179 34 0 20 chr17 26133566 26133703 -69138948 - B1_Mus2 SINE Alu -9 138 2 2 784 1051 206 9 29 chr17 26133710 26133920 -69138731 - B3 SINE B2 -5 211 6 2 784 388 177 10 20 chr17 26133937 26134035 -69138616 + CT-rich Low_complexity Low_complexity 1 97 0 2 784 627 229 53 46 chr17 26134126 26134277 -69138374 - B4A SINE B4 -100 192 41 2 784 449 339 0 0 chr17 26134294 26134418 -69138233 - ID_B1 SINE B4 -21 203 80 2 784 219 36 0 0 chr17 26134551 26134579 -69138072 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 784 1072 80 0 0 chr17 26134579 26134717 -69137934 - B1_Mus1 SINE Alu -9 139 2 2 784 335 223 202 0 chr17 26135873 26135967 -69136684 + MT2B LTR ERVL 1 113 -488 2 784 2957 145 73 4 chr17 26135967 26136515 -69136136 + MERVL_2A-int LTR ERVL 605 1190 -4571 2 784 811 162 15 7 chr17 26136515 26136652 -69135999 + B1_Mur4 SINE Alu 1 138 -12 2 784 7097 40 5 0 chr17 26136660 26137533 -69135118 - L1Md_F2 LINE L1 -1 6581 5705 2 784 3776 174 77 24 chr17 26137582 26138630 -69134021 + MERVL_2A-int LTR ERVL 1178 2349 -3412 2 784 2709 185 44 7 chr17 26138646 26139190 -69133461 + MERVL_2A-int LTR ERVL 5052 5615 -146 2 784 247 247 0 34 chr17 26139190 26139278 -69133373 + ORR1A3-int LTR MaLR 572 656 -1307 2 784 419 211 53 0 chr17 26139317 26139412 -69133239 - B1_Mus1 SINE Alu -16 132 33 2 784 788 210 34 71 chr17 26139436 26139741 -69132910 + MT2B LTR ERVL 83 544 -57 2 784 264 111 0 0 chr17 26139741 26139786 -69132865 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 2 784 689 175 9 141 chr17 26139786 26139880 -69132771 + MT2B LTR ERVL 466 533 0 2 784 1141 191 58 8 chr17 26139915 26140158 -69132493 + ORR1D1 LTR MaLR 104 358 -16 2 784 243 0 0 0 chr17 26140162 26140189 -69132462 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 784 2425 183 28 81 chr17 26140214 26140755 -69131896 + ORR1D1-int LTR MaLR 852 1363 -7 2 784 1052 214 25 118 chr17 26140746 26141101 -69131550 + ORR1D1 LTR MaLR 53 374 0 2 784 486 201 100 79 chr17 26142139 26142279 -69130372 - B1_Mur1 SINE Alu 0 149 7 2 784 245 276 198 9 chr17 26142190 26142296 -69130355 - B4 SINE B4 -95 197 72 2 784 205 316 104 10 chr17 26142706 26142802 -69129849 + MIRc SINE MIR 50 154 -114 2 784 273 216 66 26 chr17 26144339 26144415 -69128236 - ID4_ SINE ID 0 83 5 2 784 246 182 0 39 chr17 26144448 26144500 -69128151 - PB1 SINE Alu -64 63 13 2 784 256 319 66 48 chr17 26144966 26145193 -69127458 + MT2B LTR ERVL 62 292 -309 2 784 884 99 7 21 chr17 26145165 26145309 -69127342 + B1_Mur4 SINE Alu 9 150 0 2 784 1073 95 0 0 chr17 26148321 26148468 -69124183 - B1_Mus2 SINE Alu 0 147 1 2 784 772 147 93 0 chr17 26148476 26148605 -69124046 - B1_Mus1 SINE Alu -6 142 2 2 784 1535 21 32 0 chr17 26150302 26150488 -69122163 - B2_Mm1a SINE B2 0 193 2 2 784 1011 116 7 0 chr17 26151307 26151454 -69121197 + B1_Mur4 SINE Alu 3 150 0 2 784 607 232 14 14 chr17 26151591 26151735 -69120916 - B1F2 SINE Alu -2 147 4 2 784 29 28 0 0 chr17 26151737 26151773 -69120878 + AT_rich Low_complexity Low_complexity 1 36 0 2 784 749 209 14 0 chr17 26151854 26151993 -69120658 + B1_Mur2 SINE Alu 4 144 -5 2 784 699 186 0 67 chr17 26152007 26152157 -69120494 + B1_Mus1 SINE Alu 7 146 -2 2 784 237 33 0 0 chr17 26152158 26152188 -69120463 + (TAG)n Simple_repeat Simple_repeat 2 31 0 2 784 222 344 53 21 chr17 26152311 26152406 -69120245 + B3A SINE B2 74 171 -27 2 784 692 272 64 16 chr17 26152453 26152640 -69120011 + ID_B1 SINE B4 29 224 0 2 784 4656 54 5 5 chr17 26153184 26153799 -69118852 + L1_Mus3 LINE L1 6022 6636 -2 2 784 399 276 9 0 chr17 26153933 26154038 -69118613 + PB1D10 SINE Alu 5 110 -7 2 784 631 232 25 25 chr17 26154219 26154378 -69118273 + RSINE1 SINE B4 5 163 -2 2 784 613 153 137 0 chr17 26154403 26154527 -69118124 + B1_Mur4 SINE Alu 2 142 -8 2 784 231 125 0 0 chr17 26154592 26154632 -69118019 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 2 784 531 242 15 8 chr17 26155320 26155453 -69117198 + B1_Mur1 SINE Alu 1 134 -15 2 784 237 65 0 0 chr17 26155702 26155733 -69116918 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 784 554 263 144 5 chr17 26156008 26156195 -69116456 - B3 SINE B2 -3 213 1 2 784 720 84 3 0 chr17 26156213 26156328 -69116323 - B1_Mur4 SINE Alu 0 150 32 2 784 361 267 43 86 chr17 26156453 26156505 -69116146 + Lx7 LINE L1 7477 7530 -166 2 784 444 19 0 0 chr17 26156505 26156558 -69116093 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 784 361 267 43 86 chr17 26156558 26156714 -69115937 + Lx7 LINE L1 7531 7676 -20 2 784 892 104 20 20 chr17 26156739 26156886 -69115765 + B1_Mur4 SINE Alu 4 150 0 3 784 303 65 42 0 chr17 26156909 26156966 -69115685 + B1_Mm SINE Alu 88 147 0 3 784 393 233 67 10 chr17 26157014 26157118 -69115533 + PB1D9 SINE Alu 3 112 -8 3 784 353 310 38 30 chr17 26157127 26157260 -69115391 + RSINE1 SINE B4 12 145 -20 3 784 731 185 22 0 chr17 26157306 26157441 -69115210 - B1_Mus1 SINE Alu -9 139 2 3 784 667 158 112 8 chr17 26159549 26159683 -69112968 + B1_Mus1 SINE Alu 1 148 0 3 784 249 0 73 0 chr17 26159689 26159730 -69112921 + (CAA)n Simple_repeat Simple_repeat 2 45 0 3 784 633 192 8 8 chr17 26159762 26159883 -69112768 + B1_Mur2 SINE Alu 28 148 -1 3 784 429 205 52 35 chr17 26159900 26159913 -69112738 - PB1D9 SINE Alu 0 120 110 3 784 237 65 0 0 chr17 26159913 26159944 -69112707 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 3 784 429 205 52 35 chr17 26159944 26160046 -69112605 - PB1D9 SINE Alu -11 109 3 3 784 450 299 14 14 chr17 26160051 26160197 -69112454 - ID_B1 SINE B4 -1 223 78 3 784 1131 61 0 13 chr17 26160533 26160683 -69111968 - B1_Mus1 SINE Alu 0 148 1 3 784 306 0 0 0 chr17 26161587 26161621 -69111030 + (GGGTG)n Simple_repeat Simple_repeat 3 36 0 3 784 575 306 0 0 chr17 26161871 26162028 -69110623 + RSINE1 SINE B4 3 159 -6 3 784 206 32 0 31 chr17 26162096 26162128 -69110523 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 3 784 435 17 17 0 chr17 26162128 26162187 -69110464 - B1_Mus2 SINE Alu 0 147 88 3 784 699 166 15 34 chr17 26162210 26162358 -69110293 - B1_Mur1 SINE Alu -2 147 5 3 784 262 182 0 29 chr17 26162380 26162448 -69110203 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 784 716 234 89 6 chr17 26162459 26162627 -69110024 - B3A SINE B2 -16 182 1 3 784 627 186 46 15 chr17 26162650 26162781 -69109870 - B1_Mur1 SINE Alu -2 147 13 3 784 908 197 55 10 chr17 26162844 26163044 -69109607 - B3 SINE B2 -7 209 1 3 784 1148 48 0 7 chr17 26163300 26163447 -69109204 + B1_Mm SINE Alu 2 147 0 3 784 954 111 7 0 chr17 26163517 26163661 -69108990 + B2_Mm2 SINE B2 15 159 -36 3 784 369 0 0 0 chr17 26163663 26163704 -69108947 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 3 784 418 317 90 47 chr17 26163713 26163925 -69108726 + B4A SINE B4 26 246 -46 3 784 264 59 0 0 chr17 26163936 26163970 -69108681 + (T)n Simple_repeat Simple_repeat 1 34 0 3 784 220 270 76 48 chr17 26163970 26164075 -69108576 - PB1D7 SINE Alu 0 120 13 3 784 422 254 104 0 chr17 26164603 26164737 -69107914 + B1_Mur2 SINE Alu 2 149 0 3 784 180 0 0 0 chr17 26164740 26164760 -69107891 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3 784 756 204 0 7 chr17 26164814 26164952 -69107699 + B3 SINE B2 1 137 -79 3 784 883 158 0 0 chr17 26165464 26165610 -69107041 + B1_Mus2 SINE Alu 2 147 0 3 784 29 0 0 0 chr17 26165642 26165671 -69106980 + AT_rich Low_complexity Low_complexity 1 29 0 3 784 312 292 129 85 chr17 26165720 26166089 -69106562 + RLTR15 LTR ERVK 43 521 -7 3 784 1461 32 37 5 chr17 26166532 26166720 -69105931 + B2_Mm2 SINE B2 2 195 0 3 784 312 136 0 106 chr17 26166937 26167003 -69105648 + RLTR25B LTR ERVK 441 499 -529 3 784 882 38 0 0 chr17 26166945 26167051 -69105600 + B1_Mus2 SINE Alu 42 147 0 3 784 207 88 0 0 chr17 26167054 26167088 -69105563 + (A)n Simple_repeat Simple_repeat 1 34 0 3 784 401 207 86 46 chr17 26167431 26167583 -69105068 + MYSERV6-int LTR ERVK 4843 5000 -3959 3 784 243 163 23 0 chr17 26167588 26167631 -69105020 + B1_Mur4 SINE Alu 42 85 -65 3 784 319 171 24 24 chr17 26167739 26167823 -69104828 + MYSERV6-int LTR ERVK 6412 6495 -2464 3 784 839 244 32 32 chr17 26167947 26168137 -69104514 - B3 SINE B2 -25 191 2 3 784 317 168 67 3 chr17 26168141 26168215 -69104436 - PB1D7 SINE Alu -2 125 42 3 784 1543 42 0 68 chr17 26168215 26168421 -69104230 - B2_Mm1a SINE B2 0 193 2 3 784 905 158 0 33 chr17 26168447 26168598 -69104053 - B1_Mur2 SINE Alu 0 149 4 3 784 1214 54 0 20 chr17 26169596 26169747 -69102904 + B1_Mus1 SINE Alu 1 148 0 3 784 293 281 79 110 chr17 26169754 26169771 -69102880 + B4 SINE B4 72 229 -62 3 784 768 146 14 62 chr17 26169771 26169917 -69102734 + B1_Mus2 SINE Alu 8 146 -1 3 784 355 286 62 16 chr17 26169985 26170113 -69102538 + B1F1 SINE Alu 11 144 -5 3 784 261 343 176 0 chr17 26170128 26170236 -69102415 + ID_B1 SINE B4 90 216 -8 3 784 356 288 0 0 chr17 26170239 26170312 -69102339 + B1_Mur4 SINE Alu 1 73 -77 3 784 401 312 29 0 chr17 26171492 26171630 -69101021 - B1F SINE Alu -7 142 1 3 784 231 240 25 74 chr17 26171708 26171789 -69100862 + B3A SINE B2 111 187 -11 3 784 529 163 12 0 chr17 26173370 26173456 -69099195 + B1_Mur4 SINE Alu 14 100 -50 3 784 434 265 20 1 chr17 26174141 26174249 -69098402 + B1F SINE Alu 33 141 -6 3 784 310 256 51 0 chr17 26174263 26174380 -69098271 + L1M4 LINE L1 5151 5273 -873 3 784 816 250 61 144 chr17 26174443 26174656 -69097995 + B4A SINE B4 6 216 -76 3 784 661 276 139 32 chr17 26174656 26174907 -69097744 + B4A SINE B4 1 278 -14 3 784 816 250 61 144 chr17 26174907 26174918 -69097733 + B4A SINE B4 217 223 -69 3 784 1059 98 0 0 chr17 26174918 26174957 -69097694 + (TG)n Simple_repeat Simple_repeat 1 40 -182 3 784 1059 98 0 0 chr17 26174964 26175140 -69097511 + (TG)n Simple_repeat Simple_repeat 41 222 0 3 784 816 250 61 144 chr17 26175140 26175219 -69097432 + B4A SINE B4 224 292 0 3 784 391 212 15 0 chr17 26175240 26175306 -69097345 + AluG_3 SINE Alu 148 214 -97 3 784 216 130 0 0 chr17 26175309 26175355 -69097296 + (T)n Simple_repeat Simple_repeat 1 46 0 3 784 1561 43 5 0 chr17 26175391 26175577 -69097074 - B2_Mm1t SINE B2 -5 188 2 3 784 268 57 0 70 chr17 26175587 26175644 -69097007 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 3 784 747 159 47 8 chr17 26175646 26175773 -69096878 - B1_Mur4 SINE Alu 0 150 19 3 784 301 262 71 123 chr17 26175788 26175808 -69096843 + B4A SINE B4 66 225 -66 3 784 802 141 34 47 chr17 26175808 26175957 -69096694 + B1_Mus1 SINE Alu 1 147 -1 3 784 465 277 15 12 chr17 26175999 26176153 -69096498 + B3A SINE B2 52 206 -10 3 784 439 209 26 60 chr17 26176376 26176390 -69096261 + MT2B LTR ERVL 152 264 -337 3 784 672 107 97 0 chr17 26176390 26176493 -69096158 + B1_Mus1 SINE Alu 1 113 -35 3 784 549 231 8 32 chr17 26176475 26176600 -69096051 + B1_Mur3 SINE Alu 27 148 -1 3 784 530 98 12 0 chr17 26176600 26176682 -69095969 + (GA)n Simple_repeat Simple_repeat 1 83 0 3 784 375 210 78 14 chr17 26176696 26176823 -69095828 - MLT1A1 LTR MaLR -38 370 207 3 784 296 266 32 11 chr17 26176981 26177076 -69095575 + PB1D10 SINE Alu 21 117 0 3 784 296 360 70 28 chr17 26177082 26177225 -69095426 + RSINE1 SINE B4 5 153 -12 3 784 335 194 14 69 chr17 26177305 26177377 -69095274 + ID4_ SINE ID 5 72 -11 3 784 415 223 168 9 chr17 26177445 26177558 -69095093 + ID_B1 SINE B4 86 216 -8 3 784 244 211 0 19 chr17 26177558 26177611 -69095040 + G-rich Low_complexity Low_complexity 2 53 0 3 784 1230 62 0 0 chr17 26177928 26178074 -69094577 + B1_Mm SINE Alu 2 147 0 3 784 709 243 97 48 chr17 26178515 26178783 -69093868 + B4A SINE B4 5 285 -7 3 784 215 219 109 0 chr17 26178928 26178992 -69093659 + BC1_Mm scRNA scRNA 1 71 -81 3 784 659 235 96 27 chr17 26178943 26179131 -69093520 + ID_B1 SINE B4 23 223 -1 3 784 233 255 136 32 chr17 26179009 26179163 -69093488 - YREP_Mm Unknown Unknown -1516 296 127 3 784 44 0 0 0 chr17 26179258 26179302 -69093349 + AT_rich Low_complexity Low_complexity 1 44 0 3 784 1312 133 67 159 chr17 26179584 26179898 -69092753 + ORR1C1 LTR MaLR 90 374 -4 3 784 308 141 224 45 chr17 26180842 26180909 -69091742 - B3 SINE B2 -133 83 5 3 784 327 285 37 8 chr17 26181288 26181391 -69091260 - B1_Mur2 SINE Alu -1 119 17 3 784 805 208 0 0 chr17 26181512 26181642 -69091009 + B3 SINE B2 2 131 -85 3 784 389 165 116 87 chr17 26181684 26181776 -69090875 - B1F2 SINE Alu -51 99 5 3 784 1203 55 0 7 chr17 26181942 26182090 -69090561 + B1_Mm SINE Alu 1 147 0 3 784 554 214 51 107 chr17 26182806 26182984 -69089667 + ID_B1 SINE B4 8 175 -49 3 784 882 161 0 22 chr17 26182998 26183278 -69089373 + (CA)n Simple_repeat Simple_repeat 1 273 0 3 784 482 242 70 0 chr17 26183760 26183922 -69088729 + ORR1D2 LTR MaLR 201 384 0 3 784 231 343 9 92 chr17 26184026 26184135 -69088516 - PB1D10 SINE Alu -1 116 17 3 784 867 168 312 11 chr17 26184223 26184537 -69088114 - MTD LTR MaLR -12 407 1 3 784 284 313 83 15 chr17 26184576 26184709 -69087942 + RSINE1 SINE B4 5 146 -19 3 784 324 0 0 0 chr17 26184778 26184814 -69087837 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 784 1240 41 0 0 chr17 26184921 26185068 -69087583 + B1_Mus1 SINE Alu 2 148 0 3 784 225 0 0 0 chr17 26185068 26185093 -69087558 + (A)n Simple_repeat Simple_repeat 1 25 0 3 784 724 216 29 0 chr17 26185406 26185545 -69087106 - RSINE1 SINE B4 -6 159 17 3 784 236 146 0 35 chr17 26185640 26185697 -69086954 + (CAGA)n Simple_repeat Simple_repeat 2 56 0 3 784 752 190 104 16 chr17 26185703 26185854 -69086797 + B3A SINE B2 1 166 -32 3 784 329 0 24 0 chr17 26185854 26185895 -69086756 + (CATA)n Simple_repeat Simple_repeat 1 42 0 4 784 752 190 104 16 chr17 26185895 26185925 -69086726 + B3A SINE B2 167 198 0 3 784 27 0 0 0 chr17 26185927 26185954 -69086697 + AT_rich Low_complexity Low_complexity 1 27 0 4 784 898 174 0 7 chr17 26185960 26186110 -69086541 + B1_Mur3 SINE Alu 1 149 0 4 784 546 286 16 0 chr17 26186428 26186554 -69086097 - ID_B1 SINE B4 -11 213 86 4 784 1275 98 0 54 chr17 26186648 26186852 -69085799 + B2_Mm2 SINE B2 2 194 -1 4 784 911 230 25 51 chr17 26186973 26187170 -69085481 + B3 SINE B2 1 192 -24 4 784 341 295 137 16 chr17 26187236 26187360 -69085291 + B1F2 SINE Alu 11 149 0 4 784 1982 137 46 52 chr17 26187475 26187707 -69084944 + RLTR14 LTR ERV1 15 260 -122 4 784 1488 73 5 0 chr17 26187707 26187898 -69084753 + B2_Mm1a SINE B2 2 193 0 4 784 1982 137 46 52 chr17 26187898 26188011 -69084640 + RLTR14 LTR ERV1 261 358 -24 4 784 627 214 145 0 chr17 26189117 26189248 -69083403 - RSINE1 SINE B4 -14 151 2 4 784 1207 68 0 0 chr17 26189554 26189701 -69082950 + B1_Mus1 SINE Alu 2 148 0 4 784 189 0 0 0 chr17 26189739 26189760 -69082891 + (A)n Simple_repeat Simple_repeat 1 21 0 4 784 447 254 71 21 chr17 26189760 26189901 -69082750 + RSINE1 SINE B4 12 159 -6 4 784 920 221 27 55 chr17 26189942 26190162 -69082489 + B3 SINE B2 1 214 -2 4 784 1215 54 7 0 chr17 26190190 26190337 -69082314 + B1_Mus1 SINE Alu 1 148 0 4 784 1344 96 32 0 chr17 26190341 26190529 -69082122 + B2_Mm2 SINE B2 2 195 0 4 784 238 250 162 0 chr17 26190710 26190778 -69081873 + ID4_ SINE ID 3 81 -2 4 784 203 314 116 0 chr17 26190986 26191072 -69081579 + MER5A DNA MER1_type 93 188 -1 4 784 529 325 73 0 chr17 26191798 26191989 -69080662 + ID_B1 SINE B4 2 206 -18 4 784 707 123 127 30 chr17 26192367 26192501 -69080150 + B1_Mur2 SINE Alu 2 148 -1 4 784 300 284 0 39 chr17 26192729 26192806 -69079845 - ID_B1 SINE B4 -7 217 144 4 784 211 315 219 26 chr17 26192806 26192843 -69079808 - B1F2 SINE Alu -7 142 7 4 784 391 268 40 86 chr17 26192869 26192885 -69079766 + ID_B1 SINE B4 72 215 -9 4 784 720 181 52 15 chr17 26192885 26193020 -69079631 + B1_Mur4 SINE Alu 2 141 -9 4 784 533 341 29 0 chr17 26195125 26195298 -69077353 - B3A SINE B2 0 198 21 4 784 225 0 0 0 chr17 26195509 26195534 -69077117 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 4 784 374 220 200 0 chr17 26195539 26195639 -69077012 + PB1D9 SINE Alu 1 120 0 4 784 1087 37 90 0 chr17 26195708 26195842 -69076809 + B1_Mus2 SINE Alu 2 147 0 4 784 409 200 67 0 chr17 26195850 26195925 -69076726 + ID_B1 SINE B4 142 221 -3 4 784 242 275 49 35 chr17 26196037 26196180 -69076471 - L1MB3 LINE L1 -132 6051 5907 4 784 615 249 8 152 chr17 26196251 26196488 -69076163 + ID_B1 SINE B4 2 204 -20 4 784 225 0 0 0 chr17 26197292 26197317 -69075334 + (GCTG)n Simple_repeat Simple_repeat 1 25 0 4 784 242 253 49 25 chr17 26197546 26197627 -69075024 + PB1D10 SINE Alu 32 114 -3 4 784 225 167 0 0 chr17 26197778 26197820 -69074831 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 784 259 276 0 73 chr17 26197860 26197942 -69074709 + B1_Mur3 SINE Alu 6 81 -68 4 784 245 298 154 46 chr17 26197942 26197983 -69074668 + ID_B1 SINE B4 98 223 -1 4 784 973 139 21 0 chr17 26198008 26198152 -69074499 + B1_Mus2 SINE Alu 1 147 0 4 784 343 203 70 27 chr17 26198240 26198361 -69074290 - B1_Mur3 SINE Alu -25 124 1 4 784 22 0 0 0 chr17 26198383 26198405 -69074246 + AT_rich Low_complexity Low_complexity 1 22 0 4 784 701 251 82 49 chr17 26198437 26198621 -69074030 - B3A SINE B2 -5 190 1 4 784 22 56 0 0 chr17 26198621 26198657 -69073994 + AT_rich Low_complexity Low_complexity 1 36 0 4 784 816 179 22 0 chr17 26198657 26198791 -69073860 - B1_Mus2 SINE Alu 0 147 11 4 784 419 302 17 0 chr17 26198842 26198961 -69073690 - B1_Mur1 SINE Alu -24 125 5 4 784 222 62 0 0 chr17 26199200 26199232 -69073419 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 784 219 220 0 0 chr17 26199255 26199305 -69073346 + CT-rich Low_complexity Low_complexity 1 50 0 4 784 774 210 14 0 chr17 26199306 26199444 -69073207 - B1_Mur1 SINE Alu -8 141 2 4 784 1086 76 13 27 chr17 26199760 26199909 -69072742 + B1_Mus1 SINE Alu 2 148 0 4 784 572 136 66 3 chr17 26199986 26200108 -69072543 + B1F2 SINE Alu 9 149 0 4 784 575 271 19 19 chr17 26200193 26200351 -69072300 + ID_B1 SINE B4 66 223 -1 4 784 219 316 51 0 chr17 26200647 26200726 -69071925 + PB1D7 SINE Alu 1 83 -37 4 784 341 236 0 0 chr17 26200655 26200727 -69071924 + ID_B1 SINE B4 91 162 -62 4 784 279 289 141 0 chr17 26200781 26200909 -69071742 + RSINE1 SINE B4 1 146 -19 4 784 391 220 22 0 chr17 26200977 26201068 -69071583 + PB1D9 SINE Alu 28 120 0 4 784 575 204 12 62 chr17 26201145 26201307 -69071344 + ID_B1 SINE B4 69 222 -2 4 784 1005 64 7 28 chr17 26201167 26201312 -69071339 + B1_Mus1 SINE Alu 7 148 0 4 784 320 277 103 36 chr17 26201375 26201540 -69071111 + B3A SINE B2 1 176 -22 4 784 863 177 13 26 chr17 26201611 26201762 -69070889 + B1_Mur3 SINE Alu 1 149 0 4 784 384 250 52 10 chr17 26202190 26202287 -69070364 + PB1D9 SINE Alu 3 103 -17 4 784 323 60 0 20 chr17 26202960 26203011 -69069640 + (CAA)n Simple_repeat Simple_repeat 2 51 0 4 784 283 63 52 0 chr17 26203148 26203205 -69069446 - PB1D10 SINE Alu -5 122 52 4 784 1053 126 210 0 chr17 26203440 26203607 -69069044 - B3 SINE B2 -14 202 1 4 784 615 263 23 0 chr17 26203927 26204060 -69068591 - B1F SINE Alu -9 140 5 4 784 251 325 52 0 chr17 26204121 26204198 -69068453 - ID SINE ID -141 83 3 4 784 42 48 0 0 chr17 26206184 26206247 -69066404 + GC_rich Low_complexity Low_complexity 1 63 0 4 784 25 0 0 0 chr17 26206469 26206494 -69066157 + GC_rich Low_complexity Low_complexity 1 25 0 4 784 947 97 155 7 chr17 26207799 26207954 -69064697 + B2_Mm1a SINE B2 2 179 -14 4 784 307 83 39 67 chr17 26208020 26208137 -69064514 + B2_Mm2 SINE B2 47 195 0 4 784 525 254 76 0 chr17 26208158 26208276 -69064375 + B4A SINE B4 8 134 -158 4 784 273 210 0 0 chr17 26208306 26208368 -69064283 + GA-rich Low_complexity Low_complexity 3 64 0 4 784 766 189 189 0 chr17 26208368 26208543 -69064108 + B3 SINE B2 1 208 -8 4 784 1247 54 0 0 chr17 26208548 26208695 -69063956 + B1_Mm SINE Alu 1 147 0 4 784 36 40 0 0 chr17 26208695 26208745 -69063906 + AT_rich Low_complexity Low_complexity 1 50 0 4 784 240 202 258 43 chr17 26208749 26208842 -69063809 + B3A SINE B2 7 119 -79 4 784 1114 79 20 7 chr17 26208931 26209084 -69063567 + B2_Mm2 SINE B2 33 187 -8 4 784 386 81 32 0 chr17 26209821 26209883 -69062768 + (CATA)n Simple_repeat Simple_repeat 4 67 0 4 784 899 126 13 59 chr17 26209906 26210058 -69062593 + B1_Mus2 SINE Alu 2 146 -1 4 784 234 0 0 0 chr17 26210805 26210831 -69061820 + (T)n Simple_repeat Simple_repeat 1 26 0 4 784 189 0 0 0 chr17 26211041 26211062 -69061589 + (TC)n Simple_repeat Simple_repeat 2 22 0 4 784 1110 77 7 7 chr17 26211062 26211205 -69061446 - B1_Mus1 SINE Alu -5 143 1 4 784 1663 42 0 0 chr17 26211219 26211411 -69061240 - B2_Mm1a SINE B2 0 193 2 4 784 684 205 0 0 chr17 26211701 26211857 -69060794 + (TG)n Simple_repeat Simple_repeat 1 156 0 4 784 905 169 43 85 chr17 26211859 26212047 -69060604 - B3A SINE B2 -16 182 3 4 784 465 307 36 0 chr17 26212634 26212771 -69059880 - B1F1 SINE Alu -7 142 1 4 784 452 293 41 0 chr17 26212790 26212913 -69059738 - ID_B1 SINE B4 0 224 97 4 784 905 128 15 0 chr17 26212910 26213043 -69059608 + B1_Mus1 SINE Alu 7 141 -7 4 784 385 210 64 48 chr17 26212944 26213069 -69059582 + RLTR25B LTR ERVK 441 567 -461 4 784 488 118 24 0 chr17 26213674 26213759 -69058892 + (TTCC)n Simple_repeat Simple_repeat 3 89 0 4 784 660 102 117 17 chr17 26214076 26214196 -69058455 + L1Md_F2 LINE L1 6447 6578 -4 4 785 1201 55 0 0 chr17 26214894 26215039 -69057612 - B1_Mm SINE Alu -1 146 2 4 785 1087 82 86 23 chr17 26215050 26215224 -69057427 - B2_Mm2 SINE B2 -9 186 2 4 785 207 0 0 0 chr17 26215235 26215258 -69057393 + (A)n Simple_repeat Simple_repeat 1 23 0 4 785 864 202 65 6 chr17 26215259 26215428 -69057223 + B3 SINE B2 34 212 -4 4 785 505 253 50 62 chr17 26215467 26215627 -69057024 + RSINE1 SINE B4 2 159 -6 4 785 592 273 45 7 chr17 26215634 26215789 -69056862 + RSINE1 SINE B4 3 163 -2 4 785 228 79 0 73 chr17 26216272 26216310 -69056341 - B1_Mur4 SINE Alu -6 144 110 4 785 1459 112 10 173 chr17 26216310 26216378 -69056273 - ORR1A4 LTR MaLR 0 329 290 4 785 1135 69 14 0 chr17 26216378 26216523 -69056128 - B1_Mus2 SINE Alu 0 147 1 4 785 1459 112 10 173 chr17 26216523 26216666 -69055985 - ORR1A4 LTR MaLR -40 289 163 4 785 1147 64 0 0 chr17 26216666 26216807 -69055844 + B1_Mm SINE Alu 1 141 -6 4 785 207 0 0 0 chr17 26216810 26216833 -69055818 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 785 1459 112 10 173 chr17 26216833 26216928 -69055723 - ORR1A4 LTR MaLR -167 162 69 4 785 660 132 82 37 chr17 26216873 26217007 -69055644 - B2_Mm2 SINE B2 -55 140 1 4 785 283 243 312 9 chr17 26217009 26217121 -69055530 - B1F1 SINE Alu -1 148 3 5 785 436 303 20 0 chr17 26217198 26217297 -69055354 - PB1D10 SINE Alu -7 110 10 5 785 540 253 83 39 chr17 26217343 26217499 -69055152 + B3A SINE B2 1 163 -35 5 785 348 125 18 0 chr17 26217508 26217564 -69055087 + B1_Mur4 SINE Alu 1 57 -93 5 785 366 74 327 27 chr17 26218195 26218305 -69054346 - B2_Mm2 SINE B2 -6 189 47 5 785 1039 129 92 0 chr17 26218351 26218514 -69054137 - B2_Mm1t SINE B2 -14 179 2 5 785 1020 52 82 0 chr17 26218588 26218722 -69053929 + B1_Mus1 SINE Alu 3 147 -1 5 785 218 286 64 32 chr17 26219024 26219118 -69053533 + ID_B1 SINE B4 1 97 -127 5 785 939 102 0 0 chr17 26219371 26219508 -69053143 + (GGAAA)n Simple_repeat Simple_repeat 4 140 0 5 785 1212 49 14 0 chr17 26220302 26220446 -69052205 - B1_Mus1 SINE Alu 0 148 3 5 785 1159 55 0 20 chr17 26221189 26221338 -69051313 + B1_Mm SINE Alu 2 147 0 5 785 234 0 0 0 chr17 26221347 26221373 -69051278 + (CAA)n Simple_repeat Simple_repeat 2 27 0 5 785 291 280 151 0 chr17 26221494 26221587 -69051064 + ID_B1 SINE B4 113 219 -5 5 785 234 150 0 0 chr17 26221593 26221633 -69051018 + (TGGA)n Simple_repeat Simple_repeat 3 42 0 5 785 239 54 27 0 chr17 26221649 26221686 -69050965 + (TTTTTG)n Simple_repeat Simple_repeat 3 40 0 5 785 589 340 71 86 chr17 26221688 26221719 -69050932 + MLT1C LTR MaLR 65 95 -372 5 785 796 145 57 14 chr17 26221719 26221859 -69050792 + B1_Mm SINE Alu 1 146 -1 5 785 589 340 71 86 chr17 26221859 26221963 -69050688 + MLT1C LTR MaLR 96 183 -284 5 785 250 269 64 0 chr17 26221963 26222041 -69050610 + ID4 SINE ID 1 83 0 5 785 589 340 71 86 chr17 26222041 26222313 -69050338 + MLT1C LTR MaLR 184 465 -2 5 785 283 203 135 0 chr17 26222366 26222440 -69050211 - B3 SINE B2 -4 212 129 5 785 207 0 0 0 chr17 26222655 26222678 -69049973 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 5 785 768 203 7 14 chr17 26222678 26222812 -69049839 - B1_Mus2 SINE Alu -11 136 3 5 785 211 132 26 0 chr17 26222839 26222877 -69049774 + (TATG)n Simple_repeat Simple_repeat 1 39 0 5 785 438 296 9 0 chr17 26222878 26222986 -69049665 - RSINE1 SINE B4 -4 161 53 5 785 870 137 65 0 chr17 26223046 26223185 -69049466 - B1_Mus1 SINE Alu 0 148 1 5 785 30 0 0 0 chr17 26223192 26223222 -69049429 + AT_rich Low_complexity Low_complexity 1 30 0 5 785 440 174 0 55 chr17 26223228 26223319 -69049332 - B2_Mm2 SINE B2 -76 119 34 5 785 343 0 43 0 chr17 26223325 26223372 -69049279 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 5 785 1159 69 0 0 chr17 26223372 26223510 -69049141 - B1_Mus1 SINE Alu -9 139 2 5 785 746 30 0 20 chr17 26223520 26223621 -69049030 + B1_Mus2 SINE Alu 49 147 0 5 785 1288 60 0 6 chr17 26223626 26223793 -69048858 - L1_Mus2 LINE L1 -3 6563 6398 5 785 1224 55 0 0 chr17 26223821 26223967 -69048684 + B1_Mus2 SINE Alu 2 147 0 5 785 448 222 40 10 chr17 26226017 26226117 -69046534 - B3A SINE B2 -95 103 1 5 785 608 233 8 0 chr17 26226153 26226282 -69046369 + B1_Mus1 SINE Alu 12 141 -7 5 785 1213 41 0 20 chr17 26226571 26226720 -69045931 + B1_Mm SINE Alu 2 147 0 5 785 592 283 62 57 chr17 26228402 26228646 -69044005 + RMER15 LTR ERVL 328 572 -3 5 785 376 306 9 0 chr17 26229235 26229346 -69043305 + PB1D7 SINE Alu 1 112 -8 5 785 755 226 24 0 chr17 26229355 26229523 -69043128 + B3A SINE B2 1 172 -26 5 785 440 18 18 0 chr17 26229529 26229586 -69043065 + (TAAA)n Simple_repeat Simple_repeat 2 59 0 5 785 399 234 256 77 chr17 26229595 26229767 -69042884 + ID_B1 SINE B4 2 203 -21 5 785 317 338 29 22 chr17 26229972 26230044 -69042607 + ID_B1 SINE B4 82 157 -67 5 785 1495 70 16 0 chr17 26230044 26230231 -69042420 + B2_Mm2 SINE B2 1 190 -5 5 785 317 338 29 22 chr17 26230231 26230297 -69042354 + ID_B1 SINE B4 158 221 -3 5 785 704 183 7 14 chr17 26230347 26230491 -69042160 - B1_Mus1 SINE Alu 0 148 6 5 785 323 213 0 96 chr17 26232559 26232642 -69040009 + ID4 SINE ID 9 83 0 5 785 1018 57 7 7 chr17 26233061 26233203 -69039448 - B1_Mus1 SINE Alu 0 148 7 5 785 426 262 0 45 chr17 26233240 26233352 -69039299 - B3A SINE B2 -91 107 1 5 785 1226 58 29 0 chr17 26233463 26233634 -69039017 - B2_Mm2 SINE B2 -1 194 19 5 785 21 0 0 0 chr17 26233637 26233658 -69038993 + AT_rich Low_complexity Low_complexity 1 21 0 5 785 1194 56 0 0 chr17 26233680 26233823 -69038828 - B1_Mus1 SINE Alu -5 143 1 5 785 403 230 160 0 chr17 26233823 26233923 -69038728 - B1_Mur1 SINE Alu -21 128 13 5 785 824 88 208 54 chr17 26233923 26234091 -69038560 + B2_Mm2 SINE B2 2 195 0 5 785 1179 68 7 0 chr17 26234106 26234253 -69038398 + B1_Mus1 SINE Alu 1 148 0 5 785 687 150 158 0 chr17 26234346 26234473 -69038178 - B1_Mus1 SINE Alu -1 147 1 5 785 877 80 0 8 chr17 26234474 26234600 -69038051 + B1_Mur4 SINE Alu 13 137 -13 5 785 207 0 0 0 chr17 26234602 26234625 -69038026 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 785 451 228 0 27 chr17 26234721 26234906 -69037745 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 785 259 237 7 29 chr17 26234935 26235074 -69037577 + (TG)n Simple_repeat Simple_repeat 1 136 0 5 785 449 328 30 20 chr17 26235085 26235284 -69037367 - B4A SINE B4 -4 288 88 5 785 201 74 0 0 chr17 26235311 26235338 -69037313 + (T)n Simple_repeat Simple_repeat 1 27 0 5 785 1269 41 0 0 chr17 26235338 26235485 -69037166 - B1_Mm SINE Alu 0 147 1 5 785 578 290 98 0 chr17 26235537 26235720 -69036931 - ID_B1 SINE B4 -1 223 23 5 785 195 42 0 0 chr17 26235727 26235751 -69036900 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 5 785 24 0 0 0 chr17 26235792 26235816 -69036835 + AT_rich Low_complexity Low_complexity 1 24 0 5 785 502 165 43 17 chr17 26236321 26236438 -69036213 - B2_Mm2 SINE B2 -6 189 70 5 785 1088 87 0 0 chr17 26236511 26236649 -69036002 - B1_Mus2 SINE Alu -8 139 2 5 785 240 281 37 0 chr17 26236673 26236755 -69035896 - B3 SINE B2 0 216 132 5 785 370 76 30 15 chr17 26236815 26236882 -69035769 + (TTTC)n Simple_repeat Simple_repeat 1 68 0 5 785 956 74 309 0 chr17 26236882 26237031 -69035620 - B2_Mm2 SINE B2 0 195 1 5 785 248 291 45 18 chr17 26237044 26237156 -69035495 - L1MEf LINE L1 -4975 1225 1111 5 785 253 0 0 51 chr17 26237499 26237538 -69035113 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 5 785 413 295 23 8 chr17 26237548 26237681 -69034970 + MTEa LTR MaLR 5 139 -240 5 785 897 115 3 0 chr17 26237745 26237889 -69034762 + B1_Mus1 SINE Alu 1 148 -1 5 785 341 231 63 42 chr17 26238081 26238176 -69034475 + RSINE1 SINE B4 47 143 -22 5 785 189 0 0 0 chr17 26238220 26238241 -69034410 + (CTA)n Simple_repeat Simple_repeat 3 23 0 5 785 204 67 0 0 chr17 26238252 26238282 -69034369 + (GA)n Simple_repeat Simple_repeat 1 30 0 5 785 276 305 0 0 chr17 26238350 26238409 -69034242 - PB1D7 SINE Alu -57 63 5 5 785 530 160 8 0 chr17 26238530 26238661 -69033990 + (CAGG)n Simple_repeat Simple_repeat 4 135 0 5 785 863 53 0 0 chr17 26238832 26238946 -69033705 - B1_Mus1 SINE Alu 0 148 35 5 785 290 167 0 111 chr17 26238881 26238962 -69033689 - RLTR25A LTR ERVK -531 572 501 5 785 389 203 0 0 chr17 26238980 26239054 -69033597 - B3 SINE B2 -6 210 137 5 785 549 145 131 8 chr17 26239128 26239265 -69033386 + B1_Mus2 SINE Alu 1 148 -1 5 785 1218 55 0 0 chr17 26239269 26239415 -69033236 + B1_Mus1 SINE Alu 3 148 0 5 785 196 77 25 25 chr17 26239415 26239455 -69033196 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 5 785 379 325 0 9 chr17 26239488 26239603 -69033048 + ID_B1 SINE B4 87 200 -24 5 785 344 163 12 0 chr17 26239628 26239714 -69032937 + CT-rich Low_complexity Low_complexity 2 88 0 5 785 577 195 8 63 chr17 26239717 26239843 -69032808 - PB1D9 SINE Alu -1 119 1 5 785 2856 148 24 78 chr17 26239956 26240544 -69032107 - RMER4B LTR ERVK -4 581 26 5 785 884 106 135 32 chr17 26240551 26240707 -69031944 + B2_Mm2 SINE B2 2 173 -22 5 785 258 265 65 22 chr17 26240748 26240887 -69031764 + B3 SINE B2 47 195 0 5 785 240 105 0 0 chr17 26240887 26240894 -69031757 + (A)n Simple_repeat Simple_repeat 1 7 0 5 785 1079 102 0 0 chr17 26240894 26241041 -69031610 + B1_Mus2 SINE Alu 1 147 0 5 785 240 105 0 0 chr17 26241041 26241071 -69031580 + (A)n Simple_repeat Simple_repeat 1 30 0 5 785 688 188 98 0 chr17 26241160 26241293 -69031358 - RMER4B LTR ERVK -151 434 289 5 785 1205 74 0 0 chr17 26241294 26241442 -69031209 + B1_Mus1 SINE Alu 1 148 0 5 785 402 115 0 0 chr17 26241442 26241503 -69031148 + (A)n Simple_repeat Simple_repeat 1 61 0 5 785 446 250 0 121 chr17 26241609 26241741 -69030910 - PB1D7 SINE Alu -3 117 2 5 785 1029 175 0 5 chr17 26241796 26241953 -69030698 + B2_Mm2 SINE B2 2 157 -38 5 785 423 0 0 0 chr17 26241953 26242000 -69030651 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 5 785 1029 175 0 5 chr17 26242000 26242026 -69030625 + B2_Mm2 SINE B2 158 183 -12 5 785 1357 194 114 21 chr17 26242006 26242338 -69030313 - RLTR30 LTR ERV1 -16 363 1 5 785 443 118 0 13 chr17 26242655 26242732 -69029919 + (TCCC)n Simple_repeat Simple_repeat 4 79 0 5 785 1013 80 66 0 chr17 26243523 26243660 -69028991 + B1_Mus1 SINE Alu 3 148 0 5 785 1479 49 44 0 chr17 26243666 26243849 -69028802 + B2_Mm1t SINE B2 2 192 -1 5 785 180 0 0 0 chr17 26244028 26244048 -69028603 + (T)n Simple_repeat Simple_repeat 1 20 0 5 785 1199 68 0 0 chr17 26244048 26244195 -69028456 - B1_Mm SINE Alu 0 147 1 6 785 802 153 14 14 chr17 26244195 26244334 -69028317 + B1_Mur4 SINE Alu 12 150 0 6 785 255 125 0 0 chr17 26244334 26244374 -69028277 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 6 785 22 67 0 16 chr17 26244399 26244433 -69028218 + AT_rich Low_complexity Low_complexity 1 34 0 6 785 1495 69 16 0 chr17 26244433 26244621 -69028030 + B2_Mm2 SINE B2 1 191 -4 6 785 22 67 0 16 chr17 26244621 26244647 -69028004 + AT_rich Low_complexity Low_complexity 1 26 0 6 785 2412 62 36 0 chr17 26244653 26244960 -69027691 - L1_Mus1 LINE L1 0 6567 6250 6 785 292 273 13 5 chr17 26245112 26245198 -69027453 + PB1D10 SINE Alu 14 99 -50 6 785 1031 161 41 46 chr17 26245199 26245395 -69027256 - B2_Mm2 SINE B2 0 195 1 6 785 514 190 0 16 chr17 26245420 26245543 -69027108 + CT-rich Low_complexity Low_complexity 2 122 0 6 785 1288 41 0 0 chr17 26245551 26245698 -69026953 - B1_Mm SINE Alu 0 147 1 6 785 1239 110 40 0 chr17 26245698 26245870 -69026781 - B2_Mm2 SINE B2 -13 182 3 6 785 1095 89 0 38 chr17 26245884 26246070 -69026581 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 6 785 344 182 26 0 chr17 26246072 26246149 -69026502 + 4.5SRNA scRNA scRNA 5 83 -11 6 785 327 275 53 132 chr17 26246076 26246157 -69026494 + B1F2 SINE Alu 10 88 -61 6 785 1015 219 40 0 chr17 26246157 26246358 -69026293 - B3 SINE B2 -7 209 1 6 785 327 275 53 132 chr17 26246358 26246403 -69026248 + B1F2 SINE Alu 89 130 -19 6 785 1269 91 36 31 chr17 26246403 26246596 -69026055 - B2_Mm2 SINE B2 -1 194 1 6 785 327 275 53 132 chr17 26246596 26246619 -69026032 + B1F2 SINE Alu 131 148 -1 6 785 1729 21 0 0 chr17 26246760 26246953 -69025698 - B2_Mm1a SINE B2 0 193 1 6 785 21 0 0 0 chr17 26247051 26247072 -69025579 + AT_rich Low_complexity Low_complexity 1 21 0 6 785 417 257 27 18 chr17 26247537 26247648 -69025003 - B3A SINE B2 -86 112 1 6 785 650 228 29 34 chr17 26248442 26248619 -69024032 - B3A SINE B2 -13 182 4 6 785 473 174 22 0 chr17 26248743 26248835 -69023816 - B1_Mus2 SINE Alu -10 137 44 6 785 458 165 412 0 chr17 26249251 26249348 -69023303 - B1_Mus1 SINE Alu -7 141 5 6 785 324 308 22 0 chr17 26249410 26249501 -69023150 - PB1D7 SINE Alu -27 93 1 6 785 812 191 7 20 chr17 26249541 26249691 -69022960 - B1_Mus1 SINE Alu 0 148 1 6 785 253 246 0 63 chr17 26250292 26250418 -69022233 + G-rich Low_complexity Low_complexity 4 121 0 6 785 183 42 0 0 chr17 26250445 26250469 -69022182 + (CTG)n Simple_repeat Simple_repeat 1 24 0 6 785 28 29 0 0 chr17 26250538 26250573 -69022078 + GC_rich Low_complexity Low_complexity 1 35 0 6 785 1489 35 0 17 chr17 26251305 26251316 -69021335 - B2_Mm1a SINE B2 -19 174 166 6 785 294 29 0 0 chr17 26251316 26251351 -69021300 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 6 785 1489 35 0 17 chr17 26251351 26251516 -69021135 - B2_Mm1a SINE B2 -28 165 1 6 785 1437 89 5 0 chr17 26251516 26251707 -69020944 - B2_Mm1a SINE B2 0 193 2 6 785 30 27 0 0 chr17 26253305 26253342 -69019309 + GC_rich Low_complexity Low_complexity 1 37 0 6 785 181 175 50 0 chr17 26257843 26257883 -69014768 - L2a LINE L2 -250 3176 3135 6 785 1059 36 14 0 chr17 26261882 26262021 -69010630 - B1_Mus2 SINE Alu 0 147 7 6 785 470 173 0 126 chr17 26261917 26262036 -69010615 - MT2B LTR ERVL -337 264 161 6 785 293 83 42 0 chr17 26262711 26262759 -69009892 + (TTTC)n Simple_repeat Simple_repeat 3 52 0 6 785 1258 41 0 0 chr17 26262759 26262906 -69009745 - B1_Mus1 SINE Alu 0 148 2 6 785 931 81 69 56 chr17 26263582 26263726 -69008925 - B1_Mm SINE Alu 0 147 2 6 785 703 258 26 0 chr17 26264619 26264770 -69007881 - RSINE1 SINE B4 -2 163 9 6 785 285 301 0 66 chr17 26265100 26265203 -69007448 - PB1D10 SINE Alu -2 115 18 6 785 207 125 0 0 chr17 26265203 26265243 -69007408 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 785 285 301 0 66 chr17 26265243 26265260 -69007391 - PB1D10 SINE Alu -100 17 3 6 785 338 283 61 9 chr17 26265582 26265696 -69006955 - PB1D7 SINE Alu 0 120 1 6 785 225 94 0 0 chr17 26268787 26268819 -69003832 + (T)n Simple_repeat Simple_repeat 1 32 0 6 785 249 196 0 0 chr17 26269009 26269065 -69003586 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 785 189 0 0 0 chr17 26270328 26270349 -69002302 + (TGGGGG)n Simple_repeat Simple_repeat 3 23 0 6 785 216 0 0 0 chr17 26270469 26270493 -69002158 + (T)n Simple_repeat Simple_repeat 1 24 0 6 785 1005 44 0 14 chr17 26270493 26270632 -69002019 - B1_Mus2 SINE Alu 0 147 11 6 785 445 208 69 100 chr17 26270495 26270655 -69001996 - B4 SINE B4 -69 223 69 6 785 540 307 29 0 chr17 26271326 26271463 -69001188 + RSINE1 SINE B4 2 142 -23 6 785 237 349 58 29 chr17 26271463 26271500 -69001151 + B2_Mm2 SINE B2 1 179 -16 6 785 829 139 14 21 chr17 26271756 26271896 -69000755 - B1_Mur4 SINE Alu -6 144 6 6 785 841 151 251 17 chr17 26271924 26272099 -69000552 + B3 SINE B2 1 216 0 6 785 344 254 0 0 chr17 26272132 26272203 -69000448 + PB1D10 SINE Alu 18 88 -29 6 785 1377 87 22 0 chr17 26272884 26273068 -68999583 - B2_Mm1t SINE B2 -5 188 1 6 785 555 137 16 33 chr17 26273088 26273209 -68999442 - L1_Mus3 LINE L1 -3 6635 6517 6 785 955 49 17 174 chr17 26273240 26273412 -68999239 - B1_Mus2 SINE Alu 0 147 3 6 785 1235 48 0 0 chr17 26273433 26273580 -68999071 - B1_Mus2 SINE Alu 0 147 1 6 785 1133 125 0 17 chr17 26273633 26273812 -68998839 + B2_Mm2 SINE B2 6 181 -14 6 785 23 0 0 0 chr17 26275636 26275659 -68996992 + GC_rich Low_complexity Low_complexity 1 23 0 6 785 33 66 0 0 chr17 26275846 26275907 -68996744 + GC_rich Low_complexity Low_complexity 1 61 0 6 785 700 183 127 39 chr17 26277866 26278071 -68994580 - ID_B1 SINE B4 -1 223 1 6 785 677 152 11 63 chr17 26278091 26278235 -68994416 - B1_Mur3 SINE Alu -2 148 1 6 785 489 223 17 26 chr17 26278330 26278445 -68994206 - PB1D7 SINE Alu -6 114 1 6 785 225 211 0 0 chr17 26280750 26280788 -68991863 + PB1 SINE Alu 24 61 -66 6 785 1035 43 0 28 chr17 26281068 26281211 -68991440 - B1_Mus2 SINE Alu 0 147 9 6 785 546 207 71 91 chr17 26281256 26281288 -68991363 - B2_Mm2 SINE B2 -1 194 162 6 785 192 77 0 0 chr17 26281288 26281314 -68991337 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 785 860 202 12 6 chr17 26281314 26281478 -68991173 - B3 SINE B2 -50 166 2 6 785 1337 81 11 0 chr17 26281908 26282082 -68990569 - B2_Mm2 SINE B2 -19 176 1 6 785 822 176 15 8 chr17 26282444 26282576 -68990075 + B1_Mur3 SINE Alu 1 133 -16 6 785 1147 61 0 7 chr17 26282793 26282941 -68989710 - B1_Mus1 SINE Alu 0 148 2 6 785 572 266 81 12 chr17 26282974 26283134 -68989517 - ID_B1 SINE B4 -2 222 52 6 785 342 231 161 8 chr17 26283180 26283298 -68989353 - ID_B1 SINE B4 -7 217 82 6 785 208 256 0 0 chr17 26283562 26283605 -68989046 + CT-rich Low_complexity Low_complexity 3 45 0 6 785 673 204 13 39 chr17 26283605 26283758 -68988893 - B1_Mur1 SINE Alu 0 149 1 6 785 568 189 247 17 chr17 26283958 26284136 -68988515 + URR1B DNA MER1_type 7 225 0 6 785 754 195 6 51 chr17 26284723 26284880 -68987771 - B1_Mur4 SINE Alu 0 150 1 6 785 367 302 0 65 chr17 26284881 26284902 -68987749 - PB1D10 SINE Alu 0 117 4 6 785 407 307 0 0 chr17 26284902 26285003 -68987648 - ID_B1 SINE B4 -39 185 85 6 785 270 266 51 42 chr17 26285053 26285088 -68987563 + ID_B1 SINE B4 106 192 -32 6 785 458 111 28 0 chr17 26285088 26285160 -68987491 + B1_Mus2 SINE Alu 67 140 -7 6 785 270 266 51 42 chr17 26285160 26285171 -68987480 + ID_B1 SINE B4 193 224 0 6 785 325 274 24 16 chr17 26285184 26285310 -68987341 - B3A SINE B2 -6 192 66 6 785 646 199 37 0 chr17 26285387 26285523 -68987128 - B1_Mur2 SINE Alu 0 149 9 6 785 342 274 71 62 chr17 26285429 26285542 -68987109 - B4 SINE B4 -98 194 81 6 785 1246 41 0 0 chr17 26285577 26285723 -68986928 - B1_Mus2 SINE Alu 0 147 2 6 785 366 242 99 20 chr17 26285732 26285833 -68986818 - PB1D10 SINE Alu -3 114 6 6 785 22 0 0 0 chr17 26285851 26285873 -68986778 + AT_rich Low_complexity Low_complexity 1 22 0 6 785 689 236 6 42 chr17 26285894 26286062 -68986589 - RSINE1 SINE B4 0 165 4 6 785 312 296 31 31 chr17 26286119 26286248 -68986403 - B3 SINE B2 -4 212 84 6 785 299 222 26 65 chr17 26286872 26286949 -68985702 - B1_Mus2 SINE Alu -5 142 69 6 785 961 220 0 164 chr17 26287038 26287435 -68985216 - RLTR21 LTR ERVK -159 1413 1082 6 785 3515 206 144 50 chr17 26287416 26287877 -68984774 - RMER12B LTR ERVK -143 1261 779 6 785 1116 68 7 7 chr17 26287877 26288025 -68984626 - B1_Mus1 SINE Alu 0 148 1 6 785 3515 206 144 50 chr17 26288025 26288441 -68984210 - RMER12B LTR ERVK -626 778 294 6 785 1050 135 5 63 chr17 26288441 26288647 -68984004 + B2_Mm2 SINE B2 1 194 -1 6 785 3515 206 144 50 chr17 26288647 26288920 -68983731 - RMER12B LTR ERVK -1111 293 3 6 785 400 207 69 0 chr17 26288920 26289004 -68983647 - B1_Mur4 SINE Alu -59 91 2 6 785 1178 87 59 16 chr17 26289455 26289468 -68983183 - B2_Mm2 SINE B2 -1 194 182 6 785 1077 50 43 7 chr17 26289468 26289609 -68983042 - B1_Mm SINE Alu 0 147 2 6 785 1178 87 59 16 chr17 26289609 26289781 -68982870 - B2_Mm2 SINE B2 -14 181 1 6 785 696 146 57 0 chr17 26290043 26290166 -68982485 - B3 SINE B2 -86 130 1 6 785 515 328 0 0 chr17 26290179 26290307 -68982344 - ID_B1 SINE B4 -7 217 90 6 785 297 0 0 0 chr17 26290388 26290421 -68982230 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 785 183 129 0 0 chr17 26290601 26290632 -68982019 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 7 785 561 154 0 0 chr17 26291011 26291102 -68981549 - B3 SINE B2 -125 91 1 7 785 337 167 15 0 chr17 26292308 26292374 -68980277 + B3 SINE B2 150 216 0 7 785 305 208 188 50 chr17 26292387 26292488 -68980163 + PB1D7 SINE Alu 6 120 0 7 785 732 158 251 23 chr17 26292492 26292667 -68979984 + B3 SINE B2 1 215 -1 7 785 1739 16 0 0 chr17 26292697 26292889 -68979762 + B2_Mm1a SINE B2 2 193 0 7 785 189 74 0 0 chr17 26292917 26292944 -68979707 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 7 785 674 191 0 0 chr17 26293009 26293124 -68979527 - B1_Mus1 SINE Alu -24 124 10 7 785 726 197 36 0 chr17 26293132 26293269 -68979382 - B1_Mur2 SINE Alu -7 142 1 7 785 237 246 0 66 chr17 26293375 26293436 -68979215 + B1_Mur2 SINE Alu 86 142 -7 7 785 1506 58 11 0 chr17 26293494 26293682 -68978969 + B2_Mm1a SINE B2 3 192 -1 7 785 315 0 0 0 chr17 26293834 26293869 -68978782 + (CATA)n Simple_repeat Simple_repeat 4 38 0 7 785 516 219 43 17 chr17 26293870 26293986 -68978665 + B1_Mur2 SINE Alu 2 120 0 7 785 1075 116 87 0 chr17 26294062 26294234 -68978417 + B2_Mm2 SINE B2 4 190 -5 7 785 189 0 0 0 chr17 26294303 26294324 -68978327 + (TA)n Simple_repeat Simple_repeat 1 21 0 7 785 285 29 0 0 chr17 26294324 26294357 -68978294 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 785 902 114 0 0 chr17 26294423 26294554 -68978097 + B1_Mus1 SINE Alu 6 136 -12 7 785 324 70 0 0 chr17 26294555 26294598 -68978053 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 7 785 476 206 9 45 chr17 26294629 26294741 -68977910 + PB1D9 SINE Alu 12 119 -1 7 785 23 54 0 0 chr17 26294780 26294817 -68977834 + AT_rich Low_complexity Low_complexity 1 37 0 7 785 701 263 15 54 chr17 26294820 26295025 -68977626 - B3A SINE B2 0 198 2 7 785 733 251 89 0 chr17 26295067 26295258 -68977393 + B3 SINE B2 5 212 -4 7 785 1182 119 0 61 chr17 26296048 26296072 -68976579 - B2_Mm2 SINE B2 -10 185 165 7 785 1261 118 43 0 chr17 26296072 26296258 -68976393 - B2_Mm2 SINE B2 0 195 2 7 785 1182 119 0 61 chr17 26296258 26296430 -68976221 - B2_Mm2 SINE B2 -31 164 1 7 785 1195 81 0 0 chr17 26296435 26296583 -68976068 - B1_Mus1 SINE Alu 0 148 1 7 785 270 0 0 0 chr17 26296587 26296617 -68976034 + (T)n Simple_repeat Simple_repeat 1 30 0 7 785 1129 186 24 10 chr17 26296627 26296833 -68975818 - B3 SINE B2 -7 209 1 7 785 513 0 0 0 chr17 26296837 26296894 -68975757 + (TTTA)n Simple_repeat Simple_repeat 1 57 0 7 785 415 309 63 8 chr17 26296898 26297025 -68975626 - B3A SINE B2 -26 172 39 7 785 601 257 57 31 chr17 26297072 26297265 -68975386 - B3 SINE B2 -17 199 2 7 785 578 303 9 66 chr17 26297708 26297934 -68974717 - ID_B1 SINE B4 -4 220 8 7 785 578 279 0 0 chr17 26298213 26298349 -68974302 - B1F2 SINE Alu -5 144 9 7 785 260 333 12 12 chr17 26298275 26298360 -68974291 - B4A SINE B4 -125 167 83 7 785 1201 41 7 0 chr17 26298365 26298510 -68974141 - B1_Mm SINE Alu -1 146 1 7 785 262 211 38 0 chr17 26298804 26298872 -68973779 + B1_Mur4 SINE Alu 15 87 -63 7 785 183 162 0 0 chr17 26298878 26298915 -68973736 + (TA)n Simple_repeat Simple_repeat 2 38 0 7 785 1358 105 16 0 chr17 26298979 26299169 -68973482 - B2_Mm2 SINE B2 -1 194 2 7 785 397 281 0 12 chr17 26299172 26299255 -68973396 - B1_Mus1 SINE Alu -66 82 1 7 785 685 183 15 44 chr17 26299989 26300126 -68972525 + B1_Mur1 SINE Alu 17 149 0 7 785 208 147 0 0 chr17 26300134 26300168 -68972483 + (A)n Simple_repeat Simple_repeat 1 34 0 7 785 210 154 0 0 chr17 26300354 26300393 -68972258 + (TTATA)n Simple_repeat Simple_repeat 5 43 0 7 785 242 286 0 16 chr17 26300419 26300483 -68972168 - PB1D7 SINE Alu -57 63 1 7 785 1197 61 0 0 chr17 26300496 26300643 -68972008 - B1_Mus2 SINE Alu 0 147 1 7 785 430 285 88 0 chr17 26301098 26301235 -68971416 - RSINE1 SINE B4 -8 157 9 7 785 1433 88 5 15 chr17 26301472 26301669 -68970982 - B2_Mm2 SINE B2 0 195 1 7 785 737 221 0 0 chr17 26301842 26301982 -68970669 - B1_Mur1 SINE Alu -9 140 1 7 785 341 226 226 0 chr17 26302804 26302919 -68969732 - B1_Mus2 SINE Alu -5 142 2 7 785 213 39 0 0 chr17 26303943 26303969 -68968682 + (GGGGA)n Simple_repeat Simple_repeat 3 28 0 7 785 369 269 108 63 chr17 26304042 26304153 -68968498 + PB1D10 SINE Alu 2 117 0 7 785 672 224 179 17 chr17 26304165 26304338 -68968313 + B3 SINE B2 5 205 -11 7 785 234 0 0 0 chr17 26304382 26304408 -68968243 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 785 693 215 0 8 chr17 26304483 26304731 -68967920 + CT-rich Low_complexity Low_complexity 1 245 0 7 785 327 307 0 0 chr17 26304733 26304808 -68967843 + B1_Mus1 SINE Alu 1 75 -73 7 785 189 74 0 0 chr17 26304834 26304861 -68967790 + (GA)n Simple_repeat Simple_repeat 2 28 0 7 785 1906 146 71 22 chr17 26304891 26305255 -68967396 - ORR1B1 LTR MaLR -7 387 6 7 785 441 217 113 32 chr17 26305312 26305341 -68967310 - B1F2 SINE Alu -11 138 52 7 785 479 235 126 66 chr17 26305341 26305399 -68967252 - B4A SINE B4 -98 194 137 7 785 180 0 0 0 chr17 26305399 26305419 -68967232 + (TC)n Simple_repeat Simple_repeat 1 20 0 7 785 441 217 113 32 chr17 26305419 26305455 -68967196 - B1F2 SINE Alu -98 51 6 7 785 479 235 126 66 chr17 26305455 26305542 -68967109 - B4A SINE B4 -156 136 3 7 785 459 317 35 41 chr17 26305625 26305796 -68966855 + B3 SINE B2 7 176 -40 7 785 655 270 4 7 chr17 26306017 26306189 -68966462 - L1MD LINE L1 -1164 4982 4809 7 785 302 95 375 0 chr17 26306576 26306680 -68965971 - B2_Mm2 SINE B2 -6 189 47 7 785 1341 74 11 6 chr17 26306712 26306889 -68965762 - B2_Mm1t SINE B2 -14 179 2 7 785 1155 75 0 0 chr17 26306911 26307057 -68965594 - B1_Mus2 SINE Alu 0 147 2 7 785 657 164 45 0 chr17 26307127 26307261 -68965390 + URR1B DNA MER1_type 86 225 0 7 785 347 224 13 38 chr17 26307261 26307337 -68965314 - B1_Mus2 SINE Alu -72 75 2 7 785 248 284 13 26 chr17 26307269 26307345 -68965306 - B4A SINE B4 -137 155 81 7 785 1629 27 5 0 chr17 26307415 26307602 -68965049 - B2_Mm1a SINE B2 -4 189 2 7 785 1235 100 53 0 chr17 26307625 26307795 -68964856 - B2_Mm2 SINE B2 -14 181 3 7 785 1174 124 15 30 chr17 26307802 26308002 -68964649 - URR1A DNA MER1_type -28 198 2 7 785 786 262 92 13 chr17 26308170 26308398 -68964253 + B4A SINE B4 14 259 -33 7 785 338 221 58 12 chr17 26308404 26308507 -68964144 + PB1D10 SINE Alu 1 109 -8 7 785 230 217 186 14 chr17 26308551 26308621 -68964030 + PB1D9 SINE Alu 34 115 -5 7 785 1227 68 0 0 chr17 26308628 26308789 -68963862 + B2_Mm2 SINE B2 1 161 -34 7 785 297 0 0 0 chr17 26308789 26308822 -68963829 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 7 785 289 236 40 40 chr17 26308928 26309003 -68963648 + PB1D10 SINE Alu 3 77 -40 7 785 198 71 0 0 chr17 26309089 26309117 -68963534 + (TA)n Simple_repeat Simple_repeat 1 28 0 7 785 284 103 0 79 chr17 26309117 26309180 -68963471 + (CA)n Simple_repeat Simple_repeat 1 58 0 7 785 799 264 46 10 chr17 26309203 26309398 -68963253 + B3 SINE B2 8 209 -7 7 785 737 159 127 15 chr17 26309464 26309598 -68963053 - B1_Mur4 SINE Alu -1 149 1 7 785 545 181 8 65 chr17 26309598 26309722 -68962929 - B1_Mur3 SINE Alu -12 137 21 7 785 632 164 58 97 chr17 26309726 26309881 -68962770 - B1_Mur3 SINE Alu 0 149 1 7 785 1219 108 49 0 chr17 26310828 26311013 -68961638 - B2_Mm2 SINE B2 0 195 2 7 785 358 236 46 26 chr17 26311021 26311118 -68961533 + B1F SINE Alu 19 120 0 7 785 1065 37 67 0 chr17 26311333 26311468 -68961183 - B1_Mus2 SINE Alu -3 144 1 7 785 270 0 0 0 chr17 26312141 26312171 -68960480 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 7 785 1130 88 0 7 chr17 26312171 26312319 -68960332 - B1_Mus1 SINE Alu -1 147 1 7 785 27 0 0 0 chr17 26312416 26312443 -68960208 + AT_rich Low_complexity Low_complexity 1 27 0 7 785 847 197 15 0 chr17 26312451 26312588 -68960063 + B1_Mur2 SINE Alu 2 140 -9 7 785 414 245 198 19 chr17 26312607 26312769 -68959882 - B3 SINE B2 -25 191 1 7 785 280 339 78 31 chr17 26312962 26313090 -68959561 - B4A SINE B4 -91 201 68 7 785 297 274 31 10 chr17 26313379 26313475 -68959176 - LTR82A LTR ERVL -483 389 292 7 785 1884 131 19 16 chr17 26313532 26313850 -68958801 - ORR1A2 LTR MaLR -8 319 1 7 785 10049 127 96 37 chr17 26313850 26314734 -68957917 - ORR1A2-int LTR MaLR 0 1963 1034 7 785 1282 126 11 0 chr17 26314734 26314925 -68957726 - B2_Mm1t SINE B2 0 193 1 7 785 10049 127 96 37 chr17 26314925 26315894 -68956757 - ORR1A2-int LTR MaLR -930 1033 1 7 785 352 64 0 0 chr17 26315898 26315945 -68956706 - ORR1A2 LTR MaLR -8 318 272 7 785 1218 62 0 0 chr17 26315949 26316095 -68956556 - B1_Mus2 SINE Alu -1 146 1 7 785 1197 119 11 6 chr17 26316095 26316272 -68956379 - B2_Mm1t SINE B2 -15 178 1 7 785 292 206 139 9 chr17 26316315 26316423 -68956228 + L2a LINE L2 3305 3426 0 7 785 528 200 0 0 chr17 26316472 26316582 -68956069 + (TA)n Simple_repeat Simple_repeat 2 111 0 7 785 1548 48 16 5 chr17 26316640 26316829 -68955822 + B2_Mm2 SINE B2 1 191 -4 7 785 373 215 0 0 chr17 26316846 26316911 -68955740 + B1_Mur4 SINE Alu 1 65 -85 7 785 687 25 0 0 chr17 26316930 26317011 -68955640 + (TTCTC)n Simple_repeat Simple_repeat 4 84 0 7 785 986 102 22 0 chr17 26317011 26317148 -68955503 - B1_Mus2 SINE Alu -3 144 5 8 785 186 43 0 0 chr17 26317271 26317294 -68955357 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 8 785 588 226 60 0 chr17 26317475 26317608 -68955043 - B1_Mur1 SINE Alu -8 141 1 8 785 303 314 20 0 chr17 26317879 26317981 -68954670 - ID_B1 SINE B4 -120 104 1 8 785 234 0 0 0 chr17 26319025 26319051 -68953600 + (TG)n Simple_repeat Simple_repeat 1 26 0 8 785 216 0 0 0 chr17 26319051 26319074 -68953577 + (GA)n Simple_repeat Simple_repeat 1 24 0 8 785 1115 69 0 40 chr17 26320052 26320203 -68952448 - B1_Mm SINE Alu 0 147 3 8 785 989 143 68 6 chr17 26320851 26321027 -68951624 + B2_Mm2 SINE B2 2 188 -7 8 785 973 138 7 0 chr17 26321717 26321862 -68950789 - B1_Mus1 SINE Alu -2 146 1 8 785 612 0 0 0 chr17 26321871 26321939 -68950712 + (TG)n Simple_repeat Simple_repeat 2 69 0 8 785 663 227 221 0 chr17 26322336 26322508 -68950143 + B3 SINE B2 1 210 -6 8 785 36 40 0 0 chr17 26322508 26322558 -68950093 + AT_rich Low_complexity Low_complexity 1 50 0 8 785 1359 86 37 11 chr17 26322968 26323157 -68949494 - B2_Mm2 SINE B2 0 195 2 8 785 622 187 2 2 chr17 26323690 26323811 -68948840 - B1_Mus1 SINE Alu -29 120 1 8 785 271 364 44 39 chr17 26323879 26324082 -68948569 + B4A SINE B4 52 255 -37 8 785 412 224 120 9 chr17 26324136 26324244 -68948407 + PB1D9 SINE Alu 1 120 0 8 785 255 198 2 0 chr17 26324415 26324474 -68948177 + B1_Mus2 SINE Alu 91 149 0 8 785 182 208 19 0 chr17 26324474 26324527 -68948124 + GA-rich Low_complexity Low_complexity 2 55 0 8 785 344 300 0 22 chr17 26326264 26326356 -68946295 - ID_B1 SINE B4 -52 172 83 8 785 1200 55 0 7 chr17 26326560 26326708 -68945943 + B1_Mus2 SINE Alu 1 147 0 8 785 231 36 0 0 chr17 26326709 26326737 -68945914 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 8 785 1271 116 21 5 chr17 26328530 26328720 -68943931 + B2_Mm2 SINE B2 1 193 -2 8 785 1211 61 0 0 chr17 26328724 26328872 -68943779 + B1_Mus1 SINE Alu 1 148 0 8 785 1135 50 28 0 chr17 26330086 26330227 -68942424 + B1_Mus2 SINE Alu 3 147 0 8 785 751 124 0 0 chr17 26331402 26331515 -68941136 + B1_Mm SINE Alu 1 113 -34 8 785 243 88 0 0 chr17 26331556 26331590 -68941061 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 8 785 189 0 0 0 chr17 26331637 26331658 -68940993 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 8 785 23 33 0 0 chr17 26338092 26338122 -68934529 + GC_rich Low_complexity Low_complexity 1 30 0 8 785 223 219 35 49 chr17 26338168 26338312 -68934339 + (CCGCG)n Simple_repeat Simple_repeat 3 144 0 8 785 853 121 30 8 chr17 26340986 26341119 -68931532 + B1_Mur4 SINE Alu 5 140 -10 8 785 240 35 0 0 chr17 26342426 26342455 -68930196 + (TGGGGG)n Simple_repeat Simple_repeat 1 29 0 8 785 474 202 91 9 chr17 26343498 26343608 -68929043 + B1_Mur2 SINE Alu 28 146 -3 8 785 684 157 88 22 chr17 26343610 26343747 -68928904 + B1_Mur3 SINE Alu 4 149 0 8 785 478 300 31 0 chr17 26343822 26343952 -68928699 + ID_B1 SINE B4 84 217 -7 8 786 232 222 12 111 chr17 26345634 26345715 -68926936 - B1F1 SINE Alu -45 104 32 8 786 286 317 121 8 chr17 26345747 26345823 -68926828 + B1_Mur1 SINE Alu 5 90 -59 8 786 1207 34 0 0 chr17 26345823 26345970 -68926681 + B1_Mus2 SINE Alu 1 147 0 8 786 286 317 121 8 chr17 26345970 26346017 -68926634 + B1_Mur1 SINE Alu 91 142 -7 8 786 21 0 0 31 chr17 26346185 26346203 -68926448 + AT_rich Low_complexity Low_complexity 1 18 0 8 786 1148 54 0 26 chr17 26346203 26346355 -68926296 - B1_Mus1 SINE Alu 0 148 1 8 786 21 0 0 31 chr17 26346355 26346368 -68926283 + AT_rich Low_complexity Low_complexity 1 13 0 8 786 573 114 208 16 chr17 26346407 26346481 -68926170 + B1_Mur3 SINE Alu 1 82 -67 8 786 684 0 0 0 chr17 26346481 26346557 -68926094 + (GA)n Simple_repeat Simple_repeat 2 77 0 8 786 573 114 208 16 chr17 26346557 26346607 -68926044 + B1_Mur3 SINE Alu 83 147 -2 8 786 336 38 18 36 chr17 26346785 26346840 -68925811 + B1_Mus2 SINE Alu 94 147 0 8 786 550 194 46 0 chr17 26346847 26346955 -68925696 - B1_Mm SINE Alu -32 115 3 8 786 385 204 0 72 chr17 26346860 26346971 -68925680 - MT2B LTR ERVL -344 257 155 8 786 321 274 34 57 chr17 26346967 26347122 -68925529 - PB1D10 SINE Alu -6 144 1 8 786 416 242 39 48 chr17 26348473 26348577 -68924074 + RSINE1 SINE B4 2 104 -61 8 786 1164 34 0 20 chr17 26348577 26348727 -68923924 + B1_Mus2 SINE Alu 1 147 0 8 786 189 0 0 0 chr17 26348727 26348748 -68923903 + (A)n Simple_repeat Simple_repeat 1 21 0 8 786 221 270 0 93 chr17 26351832 26351983 -68920668 + (CTGGGG)n Simple_repeat Simple_repeat 6 142 0 8 786 846 224 113 158 chr17 26352653 26353115 -68919536 + RMER4B LTR ERVK 15 455 -11 8 786 1071 81 0 13 chr17 26353713 26353863 -68918788 + B1_Mus1 SINE Alu 1 148 0 8 786 352 234 138 0 chr17 26354547 26354641 -68918010 + PB1D10 SINE Alu 11 117 0 8 786 407 209 11 11 chr17 26354654 26354741 -68917910 + B4A SINE B4 8 94 -198 8 786 511 177 21 0 chr17 26355862 26355958 -68916693 + B1_Mur1 SINE Alu 46 143 -6 8 786 1146 55 7 0 chr17 26356168 26356313 -68916338 + B1_Mus1 SINE Alu 2 147 -1 8 786 209 125 0 24 chr17 26356414 26356455 -68916196 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 8 786 1120 62 7 0 chr17 26356455 26356601 -68916050 - B1_Mus1 SINE Alu 0 148 2 8 786 506 287 97 19 chr17 26356629 26356835 -68915816 + ID_B1 SINE B4 1 222 -2 8 786 24 0 0 0 chr17 26356835 26356859 -68915792 + AT_rich Low_complexity Low_complexity 1 24 0 8 786 301 300 52 43 chr17 26357643 26357758 -68914893 - RSINE1 SINE B4 0 165 50 8 786 801 172 174 20 chr17 26357805 26358001 -68914650 - MTC LTR MaLR 0 421 196 8 786 1106 62 0 7 chr17 26358040 26358187 -68914464 - B1_Mus1 SINE Alu -1 147 2 8 786 293 167 88 29 chr17 26358213 26358281 -68914370 + B1_Mur4 SINE Alu 79 150 0 8 786 3378 151 124 10 chr17 26358300 26358976 -68913675 - MTC-int LTR MaLR -272 986 234 8 786 429 272 134 46 chr17 26359201 26359417 -68913234 + RMER15 LTR ERVL 220 454 -121 8 786 1949 168 80 96 chr17 26359476 26359547 -68913104 + RLTR16 LTR ERVK 1 65 -440 8 786 1220 34 0 0 chr17 26359547 26359694 -68912957 + B1_Mus2 SINE Alu 1 147 0 8 786 1949 168 80 96 chr17 26359694 26360135 -68912516 + RLTR16 LTR ERVK 66 505 0 8 786 528 194 19 10 chr17 26360175 26360279 -68912372 - B1_Mur1 SINE Alu -11 138 34 8 786 33 25 0 0 chr17 26360280 26360320 -68912331 + AT_rich Low_complexity Low_complexity 1 40 0 8 786 563 197 8 8 chr17 26360324 26360442 -68912209 + PB1D9 SINE Alu 2 119 -1 8 786 242 148 19 0 chr17 26361679 26361733 -68910918 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 8 786 237 313 15 0 chr17 26361774 26361841 -68910810 + MIR SINE MIR 77 144 -118 8 786 288 111 0 0 chr17 26361870 26361915 -68910736 - ID_B1 SINE B4 0 224 180 8 786 276 175 173 12 chr17 26361915 26361951 -68910700 - PB1D10 SINE Alu -1 116 23 8 786 415 233 29 0 chr17 26361948 26362051 -68910600 - B3 SINE B2 -109 107 2 8 786 323 163 3 35 chr17 26362055 26362129 -68910522 - PB1D7 SINE Alu 0 120 46 8 786 448 248 17 8 chr17 26362650 26362768 -68909883 + PB1D7 SINE Alu 1 119 -1 8 786 191 32 0 61 chr17 26363555 26363588 -68909063 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8 786 540 179 11 0 chr17 26363609 26363704 -68908947 - B1_Mur1 SINE Alu -8 141 46 8 786 416 162 0 39 chr17 26363718 26363795 -68908856 + B1_Mus2 SINE Alu 74 147 0 8 786 1114 134 0 40 chr17 26363827 26363995 -68908656 + B2_Mm2 SINE B2 2 163 -32 8 786 297 0 0 0 chr17 26363995 26364028 -68908623 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 8 786 1114 134 0 40 chr17 26364028 26364046 -68908605 + B2_Mm2 SINE B2 164 180 -15 8 786 1095 55 7 0 chr17 26364046 26364191 -68908460 + B1_Mus2 SINE Alu 2 147 0 8 786 1114 134 0 40 chr17 26364191 26364205 -68908446 + B2_Mm2 SINE B2 181 194 -1 8 786 320 245 18 81 chr17 26364246 26364357 -68908294 + ID_B1 SINE B4 118 221 -3 8 786 367 235 41 7 chr17 26364420 26364525 -68908126 - PB1D9 SINE Alu -26 123 22 8 786 444 237 11 0 chr17 26364717 26364810 -68907841 + PB1 SINE Alu 27 120 -7 8 786 1099 68 0 20 chr17 26365188 26365337 -68907314 + B1_Mus2 SINE Alu 2 147 0 8 786 225 0 0 0 chr17 26365337 26365362 -68907289 + (A)n Simple_repeat Simple_repeat 1 25 0 8 786 481 275 97 30 chr17 26365362 26365527 -68907124 + ID_B1 SINE B4 49 224 0 8 786 417 289 35 56 chr17 26365544 26365687 -68906964 + RSINE1 SINE B4 2 141 -24 8 786 387 89 0 0 chr17 26365687 26365743 -68906908 + (CA)n Simple_repeat Simple_repeat 1 56 0 8 786 180 0 0 0 chr17 26365845 26365865 -68906786 + (T)n Simple_repeat Simple_repeat 1 20 0 8 786 442 191 46 37 chr17 26365865 26365974 -68906677 - B1_Mur2 SINE Alu 0 149 40 8 786 195 244 0 0 chr17 26366050 26366128 -68906523 + (CCTG)n Simple_repeat Simple_repeat 2 79 0 8 786 277 324 14 0 chr17 26366339 26366410 -68906241 + B3 SINE B2 53 124 -92 8 786 539 183 9 9 chr17 26366513 26366618 -68906033 + B1_Mus2 SINE Alu 5 109 -38 8 786 348 282 111 16 chr17 26366618 26366639 -68906012 + ID_B1 SINE B4 86 223 -1 8 786 278 288 0 0 chr17 26366654 26366727 -68905924 + ID4_ SINE ID 1 73 -10 8 786 221 138 24 24 chr17 26366754 26366801 -68905850 + RSINE1 SINE B4 3 50 -115 8 786 203 168 98 0 chr17 26367101 26367153 -68905498 - MIRm SINE MIR -116 152 99 9 786 375 202 23 23 chr17 26367381 26367467 -68905184 + B3 SINE B2 131 216 0 9 786 258 371 0 67 chr17 26367504 26367608 -68905043 + ID_B1 SINE B4 84 180 -44 9 786 288 53 0 0 chr17 26367633 26367671 -68904980 + (CAGAGA)n Simple_repeat Simple_repeat 3 40 0 9 786 332 313 23 38 chr17 26368175 26368308 -68904343 + ID_B1 SINE B4 93 223 -1 9 786 563 187 52 103 chr17 26368309 26368464 -68904187 + B1_Mur2 SINE Alu 2 148 -1 9 786 215 216 0 0 chr17 26368464 26368501 -68904150 + polypurine Low_complexity Low_complexity 2 38 0 9 786 381 314 155 23 chr17 26368505 26368763 -68903888 + B4A SINE B4 1 292 0 9 786 30 27 0 0 chr17 26368933 26368970 -68903681 + AT_rich Low_complexity Low_complexity 1 37 0 9 786 252 125 0 94 chr17 26368970 26369023 -68903628 - B2_Mm2 SINE B2 -99 96 49 9 786 25 63 0 16 chr17 26369110 26369152 -68903499 + AT_rich Low_complexity Low_complexity 1 42 0 9 786 1149 41 7 7 chr17 26369152 26369299 -68903352 + B1_Mm SINE Alu 1 147 0 9 786 25 63 0 16 chr17 26369299 26369320 -68903331 + AT_rich Low_complexity Low_complexity 1 21 0 9 786 180 0 0 0 chr17 26369834 26369854 -68902797 + (GA)n Simple_repeat Simple_repeat 2 21 0 9 786 908 204 33 65 chr17 26369859 26370074 -68902577 + B3 SINE B2 5 212 -4 9 786 2283 151 44 0 chr17 26370084 26370496 -68902155 - RMER10A LTR ERVL -12 430 1 9 786 1419 64 5 0 chr17 26370501 26370688 -68901963 - B2_Mm2 SINE B2 -6 189 2 9 786 852 215 77 5 chr17 26370718 26370914 -68901737 - B3 SINE B2 -6 210 1 9 786 321 341 14 42 chr17 26370925 26371015 -68901636 + L1M5 LINE L1 3071 3161 -2985 9 786 399 211 18 55 chr17 26371015 26371125 -68901526 + PB1D9 SINE Alu 1 106 -14 9 786 321 341 14 42 chr17 26371125 26371178 -68901473 + L1M5 LINE L1 3162 3210 -2936 9 786 311 264 134 47 chr17 26371231 26371244 -68901407 - ID_B1 SINE B4 -1 223 211 9 786 465 19 0 0 chr17 26371244 26371298 -68901353 + (TC)n Simple_repeat Simple_repeat 1 54 0 9 786 311 264 134 47 chr17 26371298 26371411 -68901240 - ID_B1 SINE B4 -14 210 86 9 786 253 305 106 8 chr17 26371419 26371551 -68901100 - L1MD1 LINE L1 -280 5962 5818 9 786 1303 110 16 0 chr17 26371611 26371802 -68900849 - B2_Mm2 SINE B2 -1 194 1 9 786 374 329 34 41 chr17 26373341 26373470 -68899181 + ID_B1 SINE B4 78 207 -17 9 786 1135 61 0 7 chr17 26373470 26373606 -68899045 + B1_Mm SINE Alu 1 136 -11 9 786 222 37 0 0 chr17 26373606 26373633 -68899018 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 786 1135 61 0 7 chr17 26373633 26373644 -68899007 + B1_Mm SINE Alu 137 147 0 9 786 374 329 34 41 chr17 26373644 26373660 -68898991 + ID_B1 SINE B4 208 222 -2 9 786 455 302 60 19 chr17 26373660 26373860 -68898791 + RCHARR1 DNA MER1_type 523 747 -227 9 786 695 153 57 0 chr17 26373839 26373963 -68898688 - B1_Mur4 SINE Alu -9 141 11 9 786 394 271 36 43 chr17 26373963 26373978 -68898673 - ID_B1 SINE B4 -9 215 78 9 786 21 0 0 0 chr17 26373978 26373999 -68898652 + AT_rich Low_complexity Low_complexity 1 21 0 9 786 546 268 0 0 chr17 26373999 26374126 -68898525 - B1F1 SINE Alu -7 142 16 9 786 316 292 28 0 chr17 26374140 26374246 -68898405 + RCHARR1 DNA MER1_type 732 840 -134 9 786 794 222 24 48 chr17 26374232 26374440 -68898211 + B3 SINE B2 8 210 -6 9 786 389 36 18 0 chr17 26374531 26374586 -68898065 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 9 786 307 131 15 62 chr17 26375092 26375157 -68897494 + HAL1-3A_ME LINE L1 1966 2027 -831 9 786 378 154 0 0 chr17 26375189 26375267 -68897384 + (CA)n Simple_repeat Simple_repeat 1 78 0 9 786 293 155 17 0 chr17 26375402 26375460 -68897191 + GA-rich Low_complexity Low_complexity 3 61 0 9 786 216 0 0 0 chr17 26375463 26375487 -68897164 + (CA)n Simple_repeat Simple_repeat 2 25 0 9 786 275 254 0 0 chr17 26375488 26375543 -68897108 - ID4_ SINE ID -22 61 7 9 786 1076 76 0 0 chr17 26375895 26376040 -68896611 + B1_Mus1 SINE Alu 1 145 -3 9 786 183 42 0 0 chr17 26376040 26376064 -68896587 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 9 786 656 169 39 72 chr17 26376094 26376247 -68896404 + B1_Mur3 SINE Alu 1 148 -1 9 786 341 216 83 83 chr17 26376304 26376359 -68896292 + B1_Mus1 SINE Alu 24 82 -66 9 786 1331 52 0 22 chr17 26376359 26376537 -68896114 + B2_Mm1t SINE B2 1 174 -19 9 786 341 216 83 83 chr17 26376537 26376577 -68896074 + B1_Mus1 SINE Alu 83 119 -29 9 786 325 169 15 15 chr17 26377114 26377180 -68895471 - ID_B1 SINE B4 -75 149 84 9 786 355 107 0 0 chr17 26377125 26377181 -68895470 - B1F2 SINE Alu -92 57 2 9 786 460 257 79 22 chr17 26377213 26377352 -68895299 - ID_B1 SINE B4 0 224 78 9 786 417 285 29 81 chr17 26377794 26377966 -68894685 - RSINE1 SINE B4 0 165 3 9 786 1149 84 83 6 chr17 26378682 26378862 -68893789 - B2_Mm2 SINE B2 0 195 2 9 786 252 86 0 0 chr17 26378870 26378905 -68893746 + (T)n Simple_repeat Simple_repeat 1 35 0 9 786 1176 61 0 0 chr17 26378908 26379055 -68893596 - B1_Mm SINE Alu 0 147 1 9 786 643 236 0 0 chr17 26379292 26379415 -68893236 + B3 SINE B2 56 178 -38 9 786 284 94 19 0 chr17 26379415 26379468 -68893183 + (TC)n Simple_repeat Simple_repeat 2 55 0 9 786 488 257 51 7 chr17 26379524 26379661 -68892990 + B1_Mur1 SINE Alu 1 143 -6 9 786 267 257 411 6 chr17 26380035 26380195 -68892456 + MLT1F1 LTR MaLR 293 517 -52 9 786 312 312 54 0 chr17 26380191 26380303 -68892348 - PB1D7 SINE Alu 0 120 3 9 786 343 280 9 78 chr17 26381589 26381705 -68890946 - RSINE1 SINE B4 -39 126 19 9 786 4503 106 7 117 chr17 26381705 26381744 -68890907 - RMER19A LTR ERVK -1 736 709 9 786 1084 75 7 0 chr17 26381744 26381890 -68890761 - B1_Mus2 SINE Alu 0 147 1 9 786 4503 106 7 117 chr17 26381890 26382577 -68890074 - RMER19A LTR ERVK -29 708 84 9 786 1188 47 0 7 chr17 26382577 26382726 -68889925 + B1_Mus1 SINE Alu 1 148 0 9 786 4503 106 7 117 chr17 26382726 26382822 -68889829 - RMER19A LTR ERVK -654 83 3 9 786 218 371 52 0 chr17 26382823 26382920 -68889731 - B4 SINE B4 -187 105 4 9 786 411 113 0 0 chr17 26382928 26382990 -68889661 + (TCC)n Simple_repeat Simple_repeat 3 64 0 9 786 469 342 24 77 chr17 26382992 26383201 -68889450 - ID_B1 SINE B4 0 224 27 9 786 218 286 0 18 chr17 26383152 26383209 -68889442 - ID4 SINE ID -9 74 19 9 786 264 257 53 71 chr17 26383261 26383374 -68889277 - RLTR25B LTR ERVK -477 551 441 9 786 763 84 0 0 chr17 26383307 26383414 -68889237 - B1_Mus1 SINE Alu -41 107 1 9 786 545 93 61 176 chr17 26383414 26383463 -68889188 + RMER19A LTR ERVK 71 103 -634 9 786 1230 104 60 0 chr17 26383463 26383646 -68889005 + B2_Mm2 SINE B2 1 194 -1 9 786 1504 39 0 0 chr17 26383646 26383827 -68888824 + B2_Mm1a SINE B2 2 182 -11 9 786 306 0 0 0 chr17 26383827 26383861 -68888790 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 9 786 545 93 61 176 chr17 26383861 26383935 -68888716 + RMER19A LTR ERVK 104 179 -558 9 786 189 0 0 0 chr17 26384025 26384046 -68888605 + (CAGA)n Simple_repeat Simple_repeat 2 22 0 9 786 300 53 0 0 chr17 26384067 26384105 -68888546 + (TTTC)n Simple_repeat Simple_repeat 1 38 0 9 786 775 169 56 0 chr17 26384105 26384247 -68888404 - B1_Mur4 SINE Alu 0 150 1 9 786 776 276 0 53 chr17 26384417 26384624 -68888027 - B3A SINE B2 0 198 3 9 786 498 245 6 104 chr17 26384655 26384764 -68887887 - RMER5 LTR ERV1 0 534 429 9 786 1692 98 194 29 chr17 26384764 26385078 -68887573 - ORR1B2 LTR MaLR 0 367 2 9 786 498 245 6 104 chr17 26385078 26385141 -68887510 - RMER5 LTR ERV1 -106 428 379 9 786 643 172 86 0 chr17 26385137 26385265 -68887386 - B1_Mus2 SINE Alu -1 146 8 9 786 3264 38 2 0 chr17 26385265 26385660 -68886991 + MTA_Mm LTR MaLR 1 396 0 9 786 378 0 0 0 chr17 26385694 26385736 -68886915 + (CA)n Simple_repeat Simple_repeat 1 42 0 9 786 315 197 30 0 chr17 26385765 26385831 -68886820 - B1_Mur1 SINE Alu -29 120 53 9 786 472 220 555 0 chr17 26385968 26386112 -68886539 - ID_B1 SINE B4 0 224 1 9 786 1848 141 36 55 chr17 26386235 26386596 -68886055 - RMER6A LTR ERVK -12 744 391 9 786 816 156 31 113 chr17 26386635 26386747 -68885904 + RMER6B LTR ERVK 13 127 -334 9 786 1251 20 0 0 chr17 26386747 26386894 -68885757 - B1_Mm SINE Alu 0 147 1 9 786 816 156 31 113 chr17 26386894 26386976 -68885675 + RMER6B LTR ERVK 128 191 -270 9 786 881 41 0 16 chr17 26386954 26387077 -68885574 + B1_Mus1 SINE Alu 28 148 0 9 786 987 211 105 24 chr17 26387083 26387331 -68885320 + RMER6B LTR ERVK 194 461 0 9 786 189 0 0 0 chr17 26387566 26387587 -68885064 + (GTTTG)n Simple_repeat Simple_repeat 3 23 0 9 786 1157 115 10 35 chr17 26387968 26388166 -68884485 - B2_Mm1t SINE B2 0 193 1 9 786 672 135 0 0 chr17 26388449 26388553 -68884098 + B2_Mm2 SINE B2 4 107 -88 9 786 316 316 0 95 chr17 26388722 26388848 -68883803 + PB1D10 SINE Alu 3 116 -1 9 786 458 291 8 30 chr17 26388865 26388996 -68883655 + ID_B1 SINE B4 96 223 -1 9 786 889 75 315 0 chr17 26389034 26389180 -68883471 - B2_Mm1a SINE B2 -1 192 1 9 786 623 181 7 15 chr17 26389184 26389319 -68883332 - B1_Mus2 SINE Alu 0 147 14 9 786 1008 107 128 23 chr17 26389418 26389590 -68883061 - B2_Mm2 SINE B2 -4 191 2 9 786 29 0 0 0 chr17 26389590 26389619 -68883032 + AT_rich Low_complexity Low_complexity 1 29 0 9 786 22 0 0 0 chr17 26392128 26392150 -68880501 + AT_rich Low_complexity Low_complexity 1 22 0 9 786 495 167 0 0 chr17 26392154 26392244 -68880407 + (TA)n Simple_repeat Simple_repeat 2 91 0 9 786 834 60 0 0 chr17 26392281 26392397 -68880254 + B1_Mus1 SINE Alu 33 148 0 9 786 216 0 0 0 chr17 26392397 26392421 -68880230 + (A)n Simple_repeat Simple_repeat 1 24 0 9 786 480 286 162 0 chr17 26392430 26392584 -68880067 + B3A SINE B2 1 179 -19 9 786 23 0 0 0 chr17 26392595 26392618 -68880033 + AT_rich Low_complexity Low_complexity 1 23 0 1 786 287 194 0 43 chr17 26392697 26392767 -68879884 + B3 SINE B2 149 215 -1 9 786 237 229 0 0 chr17 26393115 26393163 -68879488 + (CATATA)n Simple_repeat Simple_repeat 5 52 0 1 786 406 241 133 14 chr17 26393328 26393471 -68879180 - RSINE1 SINE B4 -4 161 2 1 786 505 248 85 0 chr17 26393883 26394012 -68878639 - B1_Mm SINE Alu -6 141 2 1 786 635 167 66 29 chr17 26394186 26394322 -68878329 - B1_Mur2 SINE Alu -8 141 1 1 786 495 276 8 30 chr17 26394378 26394509 -68878142 - ID_B1 SINE B4 -1 223 96 1 786 207 114 0 28 chr17 26394549 26394585 -68878066 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 786 243 0 0 0 chr17 26394585 26394612 -68878039 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 786 351 0 0 0 chr17 26394614 26394653 -68877998 + (CATA)n Simple_repeat Simple_repeat 4 42 0 1 786 286 325 0 24 chr17 26394655 26394737 -68877914 - PB1D10 SINE Alu -35 82 3 1 786 542 306 71 5 chr17 26395149 26395359 -68877292 - ID_B1 SINE B4 0 224 1 1 786 1158 75 0 0 chr17 26395482 26395628 -68877023 - B1_Mm SINE Alu 0 147 2 1 786 360 0 0 0 chr17 26395652 26395692 -68876959 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 786 223 231 88 88 chr17 26395758 26395872 -68876779 - B1F SINE Alu -4 145 32 1 786 402 277 62 9 chr17 26396078 26396191 -68876460 - B1_Mur1 SINE Alu 0 149 31 1 786 333 247 20 80 chr17 26396199 26396346 -68876305 - B3A SINE B2 -19 174 36 1 786 1429 84 5 0 chr17 26396346 26396536 -68876115 - B2_Mm1a SINE B2 -1 192 2 1 786 331 236 15 167 chr17 26396536 26396576 -68876075 - B2_Mm2 SINE B2 -159 36 1 1 786 1805 153 6 35 chr17 26396618 26396957 -68875694 - ORR1A4 LTR MaLR 0 329 1 1 786 271 200 255 43 chr17 26397087 26397181 -68875470 + PB1D9 SINE Alu 5 118 -2 1 786 351 308 118 40 chr17 26397191 26397343 -68875308 + RSINE1 SINE B4 2 165 0 1 786 353 298 47 64 chr17 26397792 26397964 -68874687 + B3 SINE B2 23 191 -25 1 786 633 212 7 42 chr17 26398039 26398182 -68874469 - B1_Mur4 SINE Alu -8 142 5 1 786 613 161 35 18 chr17 26398551 26398665 -68873986 - B3 SINE B2 -100 116 1 1 786 236 273 0 18 chr17 26398665 26398719 -68873932 - B4 SINE B4 -197 95 43 1 786 266 102 490 10 chr17 26398753 26398849 -68873802 - B2_Mm2 SINE B2 -7 188 47 1 786 1060 127 6 0 chr17 26398900 26399065 -68873586 - B2_Mm1t SINE B2 -22 171 6 1 786 1041 45 30 0 chr17 26399093 26399226 -68873425 - B1_Mm SINE Alu -10 137 1 1 786 232 218 47 82 chr17 26399430 26399515 -68873136 + ID4_ SINE ID 2 83 0 1 786 615 247 96 6 chr17 26399700 26399867 -68872784 + B3A SINE B2 1 182 -16 1 786 537 224 153 32 chr17 26400042 26400199 -68872452 - B3A SINE B2 -11 187 12 1 786 198 0 0 0 chr17 26400432 26400454 -68872197 + (TGGGGG)n Simple_repeat Simple_repeat 2 23 0 1 786 431 279 19 0 chr17 26400583 26400687 -68871964 - B1_Mur2 SINE Alu -6 143 38 1 786 257 232 132 12 chr17 26400904 26400987 -68871664 + B1F2 SINE Alu 22 114 -35 1 786 232 265 110 20 chr17 26400987 26401004 -68871647 + ID_B1 SINE B4 103 211 -13 1 786 744 120 120 0 chr17 26401639 26401764 -68870887 - B1_Mus1 SINE Alu -8 140 1 1 786 257 242 14 57 chr17 26401850 26401920 -68870731 - B1F SINE Alu -54 95 29 1 786 931 145 0 65 chr17 26401940 26401976 -68870675 - B2_Mm2 SINE B2 -8 187 159 1 786 251 54 0 26 chr17 26401976 26402014 -68870637 + (TTTG)n Simple_repeat Simple_repeat 3 39 0 1 786 1182 44 0 19 chr17 26402014 26402176 -68870475 - B2_Mm1a SINE B2 -33 160 2 1 786 233 117 32 48 chr17 26402178 26402241 -68870410 + T-rich Low_complexity Low_complexity 4 65 0 1 786 526 274 0 17 chr17 26402263 26402378 -68870273 - RSINE1 SINE B4 -51 114 2 1 786 573 359 65 0 chr17 26402378 26402592 -68870059 - B4 SINE B4 -62 230 2 1 786 251 167 117 0 chr17 26402752 26402812 -68869839 - PB1D9 SINE Alu -5 115 49 1 786 462 242 81 0 chr17 26402942 26403066 -68869585 + B1_Mur1 SINE Alu 2 135 -14 1 786 287 258 45 0 chr17 26403079 26403145 -68869506 + ID4_ SINE ID 5 73 -10 1 786 403 224 61 10 chr17 26403502 26403601 -68869050 - PB1D9 SINE Alu 0 120 17 1 786 238 263 65 13 chr17 26403883 26403960 -68868691 - ID_B1 SINE B4 -15 209 129 1 786 681 230 14 7 chr17 26404318 26404458 -68868193 - B1_Mur3 SINE Alu -8 141 1 1 786 231 146 0 0 chr17 26404459 26404500 -68868151 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 786 630 174 72 0 chr17 26404512 26404650 -68868001 - B1_Mus1 SINE Alu 0 148 1 1 786 597 246 95 37 chr17 26404669 26404859 -68867792 - B3 SINE B2 -7 209 9 1 786 301 340 10 41 chr17 26405014 26405112 -68867539 + PB1D10 SINE Alu 1 95 -22 1 786 416 285 71 31 chr17 26405025 26405152 -68867499 + ID_B1 SINE B4 93 224 0 1 786 480 231 119 30 chr17 26405324 26405525 -68867126 - L1MC1 LINE L1 -108 6225 6007 1 786 1080 71 21 0 chr17 26405560 26405701 -68866950 + B1_Mus1 SINE Alu 5 148 0 1 786 209 227 0 0 chr17 26405703 26405747 -68866904 + A-rich Low_complexity Low_complexity 1 44 0 1 786 1283 88 0 76 chr17 26405999 26406209 -68866442 - B2_Mm2 SINE B2 0 195 2 1 786 27 73 0 0 chr17 26407390 26407445 -68865206 + AT_rich Low_complexity Low_complexity 1 55 0 1 786 23 78 0 0 chr17 26407531 26407582 -68865069 + AT_rich Low_complexity Low_complexity 1 51 0 1 786 324 311 0 0 chr17 26407938 26408028 -68864623 + PB1D10 SINE Alu 1 90 -27 1 786 703 211 172 0 chr17 26408085 26408265 -68864386 - B3 SINE B2 -2 214 4 1 786 1141 171 14 19 chr17 26408383 26408598 -68864053 + URR1B DNA MER1_type 8 221 -4 1 786 305 206 59 0 chr17 26408602 26408670 -68863981 + PB1D9 SINE Alu 38 109 -11 1 786 662 256 127 6 chr17 26408746 26408927 -68863724 + B3 SINE B2 9 211 -5 1 786 1156 89 0 0 chr17 26408930 26409076 -68863575 - B1_Mus1 SINE Alu -2 146 1 1 786 544 150 264 13 chr17 26409210 26409365 -68863286 - B2_Mm2 SINE B2 -1 194 1 1 786 1590 42 21 0 chr17 26409389 26409578 -68863073 - B2_Mm1t SINE B2 0 193 1 1 786 1503 168 189 38 chr17 26409578 26409943 -68862708 + MTC LTR MaLR 2 421 0 1 786 730 94 17 0 chr17 26410241 26410358 -68862293 + (TC)n Simple_repeat Simple_repeat 2 120 0 1 786 207 0 0 0 chr17 26410383 26410406 -68862245 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 786 4641 71 22 6 chr17 26410423 26411048 -68861603 - L1_Mus3 LINE L1 0 6638 6004 1 786 1507 33 60 0 chr17 26411082 26411264 -68861387 - B2_Mm1t SINE B2 0 193 1 1 786 1183 55 0 7 chr17 26411376 26411524 -68861127 - B1_Mm SINE Alu 0 147 1 1 786 404 318 18 48 chr17 26411699 26411864 -68860787 - B3A SINE B2 -3 195 36 1 786 658 188 65 36 chr17 26411880 26412018 -68860633 - B1_Mur3 SINE Alu -3 146 5 1 786 2242 125 22 5 chr17 26412942 26413345 -68859306 + RLTR44E LTR ERVK 1 410 -42 1 786 518 261 19 42 chr17 26413388 26413565 -68859086 - B3 SINE B2 -2 193 27 1 786 207 0 0 0 chr17 26413566 26413589 -68859062 + (T)n Simple_repeat Simple_repeat 1 23 0 1 786 1112 75 0 13 chr17 26413589 26413738 -68858913 - B1_Mus1 SINE Alu 0 148 2 1 786 528 254 113 26 chr17 26413766 26413960 -68858691 - B3 SINE B2 -5 211 1 1 786 550 237 8 17 chr17 26414665 26414785 -68857866 - PB1D9 SINE Alu -1 119 1 1 786 583 216 16 16 chr17 26414939 26415066 -68857585 - B1_Mus1 SINE Alu -20 128 2 1 786 389 252 171 0 chr17 26415494 26415617 -68857034 - B1_Mur3 SINE Alu 0 149 6 1 786 280 235 28 56 chr17 26415559 26415631 -68857020 - B4 SINE B4 -142 150 81 1 786 1289 27 0 0 chr17 26415655 26415802 -68856849 - B1_Mm SINE Alu 0 147 1 1 786 1037 38 114 0 chr17 26415889 26416021 -68856630 + B1_Mm SINE Alu 1 147 0 1 786 213 152 0 21 chr17 26416023 26416070 -68856581 + A-rich Low_complexity Low_complexity 3 48 0 1 786 322 272 86 0 chr17 26416166 26416247 -68856404 - PB1D9 SINE Alu -8 112 25 1 786 753 184 35 0 chr17 26416561 26416702 -68855949 - B1_Mm SINE Alu 0 147 2 1 786 274 300 140 0 chr17 26417420 26417520 -68855131 - PB1D10 SINE Alu -2 115 2 1 786 314 326 67 47 chr17 26417655 26417704 -68854947 - B3A SINE B2 0 198 156 1 786 315 0 0 0 chr17 26417704 26417739 -68854912 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 786 314 326 67 47 chr17 26417739 26417882 -68854769 - B3A SINE B2 -43 155 2 1 786 1556 53 16 0 chr17 26417905 26418094 -68854557 - B2_Mm1a SINE B2 0 193 2 1 786 264 220 0 17 chr17 26418164 26418224 -68854427 - PB1D7 SINE Alu -61 59 1 1 786 776 181 21 3 chr17 26418291 26418441 -68854210 + B1_Mur4 SINE Alu 2 150 0 1 786 183 26 75 25 chr17 26420413 26420453 -68852198 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 1 786 361 188 37 12 chr17 26420453 26420534 -68852117 - PB1D9 SINE Alu 0 120 38 1 786 1078 103 0 0 chr17 26420655 26420801 -68851850 + B1_Mus1 SINE Alu 3 148 0 1 786 281 313 69 9 chr17 26420905 26421021 -68851630 - MLT2B1 LTR ERVL -223 297 175 1 786 557 276 88 24 chr17 26421803 26422052 -68850599 - L1MB5 LINE L1 -37 6137 5873 1 786 1434 169 85 6 chr17 26422144 26422472 -68850179 + MTEb LTR MaLR 1 354 -25 1 786 408 177 232 8 chr17 26423036 26423161 -68849490 + URR1A DNA MER1_type 74 226 0 1 786 228 292 20 40 chr17 26424378 26424478 -68848173 + CT-rich Low_complexity Low_complexity 2 99 0 1 786 251 333 11 0 chr17 26424638 26424728 -68847923 + PB1 SINE Alu 1 91 -36 1 786 305 300 12 0 chr17 26424776 26424856 -68847795 + ID4_ SINE ID 1 81 -2 1 786 334 340 14 7 chr17 26426414 26426559 -68846092 + CT-rich Low_complexity Low_complexity 2 147 0 1 786 589 294 0 27 chr17 26426714 26426899 -68845752 + B3A SINE B2 3 182 -16 1 786 240 86 0 0 chr17 26426905 26426940 -68845711 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 786 329 306 82 0 chr17 26427040 26427174 -68845477 + B3 SINE B2 67 211 -5 1 786 351 287 0 36 chr17 26427213 26427325 -68845326 + B1F2 SINE Alu 3 110 -39 1 786 242 323 45 45 chr17 26427325 26427343 -68845308 + B4 SINE B4 88 217 -75 1 786 1076 115 21 37 chr17 26427384 26427574 -68845077 + B2_Mm2 SINE B2 1 187 -8 1 786 405 268 103 70 chr17 26427846 26428119 -68844532 - L1MB4 LINE L1 -39 6141 5860 1 786 2155 134 25 30 chr17 26428286 26428647 -68844004 - RLTR10D LTR ERVK 0 359 1 1 786 51420 64 16 11 chr17 26428647 26435152 -68837499 - IAP-d-int LTR ERVK 0 6542 1 1 786 2244 132 8 30 chr17 26435152 26435519 -68837132 - RLTR10D LTR ERVK 0 359 1 1 786 3348 33 10 0 chr17 26435714 26436106 -68836545 + MTA_Mm LTR MaLR 1 396 0 1 786 1131 138 53 18 chr17 26436155 26436383 -68836268 + Lx LINE L1 6418 6653 -1 1 786 372 327 68 12 chr17 26436790 26436951 -68835700 - B3A SINE B2 -26 172 3 1 786 457 275 8 0 chr17 26436977 26437097 -68835554 - B1_Mur2 SINE Alu -8 141 21 1 786 509 224 23 23 chr17 26437131 26437259 -68835392 + B3 SINE B2 2 129 -87 1 786 241 204 0 0 chr17 26437407 26437451 -68835200 + B1_Mur1 SINE Alu 67 110 -39 1 786 406 295 21 131 chr17 26437492 26437555 -68835096 - B3A SINE B2 -28 170 119 1 786 1129 134 0 36 chr17 26437555 26437749 -68834902 - B2_Mm2 SINE B2 -8 187 1 1 786 406 295 21 131 chr17 26437749 26437876 -68834775 - B3A SINE B2 -80 118 1 1 786 753 276 24 9 chr17 26438044 26438256 -68834395 + MTD LTR MaLR 205 419 0 1 786 3572 242 60 51 chr17 26438256 26438799 -68833852 + Lx9 LINE L1 6394 6921 -723 1 786 659 196 65 7 chr17 26438799 26438938 -68833713 - B1_Mus2 SINE Alu 0 147 1 1 786 3572 242 60 51 chr17 26438938 26439460 -68833191 + Lx9 LINE L1 6922 7469 -175 1 786 183 100 0 0 chr17 26439520 26439550 -68833101 + (A)n Simple_repeat Simple_repeat 1 30 0 1 786 232 175 142 28 chr17 26439576 26439682 -68832969 + Lx9 LINE L1 7527 7644 0 1 786 1236 34 7 0 chr17 26439738 26439884 -68832767 - B1_Mm SINE Alu 0 147 1 1 786 798 81 0 0 chr17 26439980 26440104 -68832547 + (TG)n Simple_repeat Simple_repeat 1 124 0 1 786 996 109 60 44 chr17 26440126 26440308 -68832343 - B2_Mm2 SINE B2 -9 186 2 1 786 323 293 85 37 chr17 26441264 26441452 -68831199 - MLT2B1 LTR ERVL 0 567 371 1 786 251 207 121 44 chr17 26441569 26441660 -68830991 - MLT2B1 LTR ERVL -392 128 31 1 786 1021 103 7 7 chr17 26441746 26441893 -68830758 + B1_Mus1 SINE Alu 2 148 0 1 786 1831 140 32 54 chr17 26442033 26442403 -68830248 + RLTR9A LTR ERVK 7 368 0 1 786 484 270 282 42 chr17 26442405 26442755 -68829896 + ETnERV-int LTR ERVK 4 437 -2877 1 786 433 248 36 54 chr17 26446022 26446188 -68826463 - RNLTR23 LTR ERVK 0 642 480 1 786 255 255 37 122 chr17 26446624 26446731 -68825920 - ETnERV2-int LTR ERVK -559 6847 6750 1 786 21711 285 46 26 chr17 26446866 26454349 -68818302 - RNERVK23-int LTR ERVK -398 7819 183 1 786 483 217 36 48 chr17 26454533 26454698 -68817953 - RNLTR23 LTR ERVK 0 642 480 1 786 213 94 0 0 chr17 26459625 26459657 -68812994 + (TTC)n Simple_repeat Simple_repeat 3 34 0 1 786 1164 112 0 0 chr17 26459657 26459668 -68812983 + (TCC)n Simple_repeat Simple_repeat 2 12 0 1 786 1452 44 0 0 chr17 26459668 26459848 -68812803 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 1 786 1164 112 0 0 chr17 26459848 26460014 -68812637 + (TCC)n Simple_repeat Simple_repeat 1 166 0 1 786 644 264 14 0 chr17 26460120 26460260 -68812391 + RSINE1 SINE B4 9 150 -15 1 786 293 278 71 36 chr17 26460566 26460678 -68811973 + MIRc SINE MIR 61 176 -92 1 786 249 247 134 12 chr17 26461082 26461164 -68811487 - ORR1E LTR MaLR -15 364 273 1 786 340 317 20 10 chr17 26461452 26461554 -68811097 - ORR1E LTR MaLR -246 113 11 1 786 2225 109 19 0 chr17 26461732 26462052 -68810599 + ORR1A3 LTR MaLR 1 326 0 1 786 948 242 66 106 chr17 26462136 26462608 -68810043 + L1MA5 LINE L1 4535 4987 -1156 1 786 599 221 65 36 chr17 26462611 26462766 -68809885 + B3A SINE B2 2 151 -44 1 786 468 0 0 0 chr17 26462769 26462821 -68809830 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 786 268 248 43 142 chr17 26462845 26462986 -68809665 + L1MA5 LINE L1 5008 5215 -928 1 786 708 237 0 0 chr17 26462995 26463130 -68809521 + ID_B1 SINE B4 88 222 -2 1 786 652 325 71 30 chr17 26463143 26463590 -68809061 + L1MA5 LINE L1 5407 5872 -428 1 786 1251 34 0 0 chr17 26463590 26463736 -68808915 + B1_Mus2 SINE Alu 2 147 0 1 786 578 341 77 43 chr17 26463736 26463897 -68808754 + L1MA5 LINE L1 5873 6035 -265 1 786 1072 74 14 0 chr17 26465060 26465208 -68807443 + RMER17B LTR ERVK 86 235 -723 1 786 407 167 11 0 chr17 26465208 26465298 -68807353 + (TG)n Simple_repeat Simple_repeat 2 92 0 1 786 300 267 0 33 chr17 26465258 26465440 -68807211 + (TATATG)n Simple_repeat Simple_repeat 1 176 0 1 786 610 168 35 12 chr17 26465450 26465619 -68807032 + (TATG)n Simple_repeat Simple_repeat 4 176 0 1 786 324 274 137 0 chr17 26465903 26465998 -68806653 - PB1D10 SINE Alu -8 109 2 1 786 222 37 0 0 chr17 26466501 26466528 -68806123 + (TAAAA)n Simple_repeat Simple_repeat 4 30 0 1 786 414 0 0 0 chr17 26466529 26466575 -68806076 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 1 786 381 261 78 0 chr17 26466724 26466866 -68805785 + L1MCa LINE L1 1503 1655 -4853 1 786 349 360 0 0 chr17 26467255 26467416 -68805235 + (CA)n Simple_repeat Simple_repeat 1 161 0 1 786 432 357 0 10 chr17 26467517 26467835 -68804816 + (CA)n Simple_repeat Simple_repeat 1 314 0 1 786 356 351 0 17 chr17 26467850 26468024 -68804627 + (CA)n Simple_repeat Simple_repeat 1 171 0 1 786 261 398 0 0 chr17 26468063 26468224 -68804427 + (CA)n Simple_repeat Simple_repeat 1 161 0 1 786 457 307 59 0 chr17 26468232 26468434 -68804217 + L1MCa LINE L1 1929 2142 -4366 1 786 1256 228 124 122 chr17 26468483 26468996 -68803655 + Lx7 LINE L1 7092 7574 -122 1 786 324 0 0 0 chr17 26468996 26469032 -68803619 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 786 1256 228 124 122 chr17 26469032 26469122 -68803529 + Lx7 LINE L1 7575 7696 0 1 786 676 248 112 47 chr17 26469133 26469366 -68803285 + B4 SINE B4 1 248 -44 1 786 1445 285 126 23 chr17 26469582 26469988 -68802663 + L1MC1 LINE L1 5413 5825 -508 1 786 1219 222 180 14 chr17 26469988 26470344 -68802307 - MTD LTR MaLR -4 415 1 1 786 1445 285 126 23 chr17 26470344 26470626 -68802025 + L1MC1 LINE L1 5826 6172 -161 1 786 278 314 0 0 chr17 26470742 26470828 -68801823 + L1MB3 LINE L1 5810 5895 -288 1 786 637 245 10 5 chr17 26471390 26471536 -68801115 + B1F2 SINE Alu 5 148 0 1 786 227 311 39 19 chr17 26471602 26471756 -68800895 + L1MCa LINE L1 2293 2449 -3872 1 786 2380 105 6 0 chr17 26473672 26473997 -68798654 + ORR1A2 LTR MaLR 1 327 0 1 786 2125 180 65 3 chr17 26474065 26474449 -68798202 - MTC LTR MaLR -8 413 6 1 98 3526 310 51 45 chr17 26475862 26477797 -68794854 - MMTV-int LTR ERVK -1971 5282 3325 1 787 4221 48 15 4 chr17 26477797 26478317 -68794334 + L1Md_F3 LINE L1 6059 6584 0 1 787 3526 310 51 45 chr17 26478317 26478862 -68793789 - MMTV-int LTR ERVK -3929 3324 2788 1 787 594 188 0 27 chr17 26478915 26479063 -68793588 + CT-rich Low_complexity Low_complexity 1 144 0 1 787 1080 96 0 0 chr17 26479063 26479209 -68793442 - B1_Mus1 SINE Alu -1 147 2 1 787 529 329 46 53 chr17 26479445 26480172 -68792479 - MMTV-int LTR ERVK -4720 2533 1828 1 787 613 83 0 0 chr17 26480242 26480326 -68792325 + B1_Mus2 SINE Alu 64 147 0 1 787 303 273 66 33 chr17 26480326 26480417 -68792234 + L1M5 LINE L1 3106 3199 -2947 1 787 955 320 52 36 chr17 26480530 26481278 -68791373 - MMTV-int LTR ERVK -5564 1689 930 1 787 1237 34 0 7 chr17 26481878 26482026 -68790625 - B1_Mm SINE Alu 0 147 1 1 787 359 233 101 116 chr17 26482171 26482425 -68790226 - RLTR13D3 LTR ERVK 0 1114 785 1 787 240 79 105 0 chr17 26482584 26482622 -68790029 - B2_Mm2 SINE B2 -153 42 1 1 787 218 56 0 27 chr17 26482798 26482835 -68789816 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 1 787 1127 89 0 14 chr17 26482835 26482983 -68789668 - B1_Mus2 SINE Alu -1 146 1 1 787 264 345 45 9 chr17 26483277 26483388 -68789263 + MIRb SINE MIR 96 210 -58 1 787 1518 228 32 45 chr17 26483668 26484044 -68788607 - MTE2b LTR MaLR -8 371 1 1 787 223 43 283 0 chr17 26484271 26484317 -68788334 - B3 SINE B2 -144 72 14 1 787 1222 83 0 0 chr17 26484372 26484528 -68788123 + B2_Mm2 SINE B2 2 157 -38 1 787 358 350 123 23 chr17 26484752 26484971 -68787680 - Tigger7 DNA MER2_type -2237 254 14 1 787 328 268 25 118 chr17 26485057 26485218 -68787433 + MLT1A LTR MaLR 9 154 -220 1 787 631 230 39 65 chr17 26485341 26485480 -68787171 + RSINE1 SINE B4 2 141 -24 1 787 857 106 0 22 chr17 26485480 26485664 -68786987 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 787 631 293 26 20 chr17 26485664 26485690 -68786961 + RSINE1 SINE B4 142 165 0 1 787 299 202 10 0 chr17 26485701 26485805 -68786846 + (CA)n Simple_repeat Simple_repeat 1 105 0 1 787 640 157 12 0 chr17 26485824 26485990 -68786661 + (CA)n Simple_repeat Simple_repeat 1 168 0 1 787 280 216 174 10 chr17 26486027 26486125 -68786526 + ORR1D1 LTR MaLR 103 216 -168 1 787 1277 103 11 0 chr17 26486125 26486300 -68786351 + B2_Mm1t SINE B2 3 179 -14 1 787 339 154 15 2 chr17 26486333 26486397 -68786254 + B2_Mm2 SINE B2 46 115 -83 1 787 753 162 156 0 chr17 26486429 26486583 -68786068 + ORR1D1 LTR MaLR 195 372 -2 1 787 397 297 0 29 chr17 26486637 26486741 -68785910 - PB1D10 SINE Alu -8 109 9 1 787 242 321 117 32 chr17 26487378 26487540 -68785111 + MIR SINE MIR 4 171 -91 1 787 334 127 14 14 chr17 26487545 26487617 -68785034 + G-rich Low_complexity Low_complexity 2 73 0 1 787 585 0 0 0 chr17 26487948 26488013 -68784638 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 787 559 311 43 57 chr17 26488073 26488381 -68784270 - ORR1E LTR MaLR -20 359 39 1 787 246 257 67 29 chr17 26488715 26488819 -68783832 - MIRb SINE MIR -121 147 40 1 787 192 77 0 0 chr17 26490505 26490531 -68782120 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 787 441 125 16 0 chr17 26490592 26490656 -68781995 - B4A SINE B4 -223 69 5 1 787 256 304 85 21 chr17 26491723 26491864 -68780787 + MER45B DNA Tip100 739 888 -152 1 787 241 231 140 0 chr17 26492174 26492317 -68780334 + (CTCTG)n Simple_repeat Simple_repeat 3 165 0 1 787 332 297 56 108 chr17 26492454 26492742 -68779909 - ORR1E LTR MaLR -96 274 3 1 787 782 237 62 10 chr17 26493436 26493628 -68779023 - B3 SINE B2 -14 202 1 1 787 425 371 61 56 chr17 26493710 26493941 -68778710 + MLT1A LTR MaLR 141 372 -2 1 787 251 345 45 0 chr17 26493981 26494091 -68778560 + PB1D10 SINE Alu 1 115 -2 1 787 264 246 0 15 chr17 26494106 26494172 -68778479 + tRNA-Ala-GCY_ tRNA tRNA 1 65 -10 1 787 308 178 14 0 chr17 26494250 26494323 -68778328 + G-rich Low_complexity Low_complexity 1 74 0 1 787 226 217 30 48 chr17 26494844 26494923 -68777728 + MIRc SINE MIR 115 198 -70 1 787 25 31 0 0 chr17 26495515 26495547 -68777104 + AT_rich Low_complexity Low_complexity 1 32 0 1 787 341 276 179 47 chr17 26495701 26495998 -68776653 - ORR1E LTR MaLR -9 350 15 1 787 186 338 102 34 chr17 26496404 26496551 -68776100 + MIRb SINE MIR 86 242 -26 1 787 252 0 0 0 chr17 26497723 26497751 -68774900 + (T)n Simple_repeat Simple_repeat 1 28 0 1 787 592 260 103 28 chr17 26498337 26498551 -68774100 - B4A SINE B4 -3 289 60 1 787 636 206 0 0 chr17 26499322 26499458 -68773193 + GA-rich Low_complexity Low_complexity 2 137 0 1 787 710 23 11 0 chr17 26499458 26499546 -68773105 + (GAAAA)n Simple_repeat Simple_repeat 5 93 0 1 787 315 330 18 0 chr17 26500001 26500113 -68772538 + MLT1D LTR MaLR 385 498 -7 1 787 5206 98 48 32 chr17 26501865 26502746 -68769905 - RMER17A2 LTR ERVK -11 895 1 2 787 192 152 0 0 chr17 26503909 26503942 -68768709 + CT-rich Low_complexity Low_complexity 2 34 0 3 787 764 50 0 10 chr17 26504987 26505089 -68767562 + (GA)n Simple_repeat Simple_repeat 2 102 0 4 787 231 270 180 16 chr17 26505567 26505695 -68766956 - L1ME1 LINE L1 -13 6166 6018 5 787 228 276 10 31 chr17 26505858 26505955 -68766696 - L1MC LINE L1 -1957 5828 5734 6 787 267 323 46 0 chr17 26509481 26509611 -68763040 - L2 LINE L2 -557 2862 2727 7 787 392 248 6 4 chr17 26510484 26510595 -68762056 - MIR SINE MIR -88 180 63 8 787 267 103 0 0 chr17 26510645 26510684 -68761967 + (ATTG)n Simple_repeat Simple_repeat 4 42 0 9 787 344 298 64 0 chr17 26511269 26511363 -68761288 - PB1D10 SINE Alu -17 100 1 1 787 186 133 0 0 chr17 26511416 26511446 -68761205 + (CATG)n Simple_repeat Simple_repeat 3 32 0 1 787 232 253 125 12 chr17 26511473 26511553 -68761098 - B4 SINE B4 -11 281 193 1 787 2722 157 72 14 chr17 26511904 26512402 -68760249 - RLTR11A2 LTR ERVK 0 527 1 1 787 440 35 0 17 chr17 26513045 26513104 -68759547 + (TCCC)n Simple_repeat Simple_repeat 1 58 0 1 787 340 322 89 44 chr17 26513536 26513856 -68758795 - L2b LINE L2 -92 3334 2973 1 787 325 274 92 23 chr17 26514829 26514960 -68757691 + ORSL DNA Tip100 136 275 0 1 787 217 343 137 0 chr17 26514968 26515070 -68757581 - MIRb SINE MIR -125 143 28 1 787 391 117 247 0 chr17 26516210 26516287 -68756364 + B3 SINE B2 1 96 -120 1 787 346 214 29 0 chr17 26517473 26517576 -68755075 + C-rich Low_complexity Low_complexity 3 108 0 1 787 207 219 0 0 chr17 26519560 26519601 -68753050 - MIRc SINE MIR -145 123 83 2 787 837 186 75 40 chr17 26521390 26521506 -68751145 + URR1B DNA MER1_type 1 129 -96 2 787 3228 25 0 3 chr17 26521506 26521874 -68750777 + IAPLTR1_Mm LTR ERVK 1 367 0 2 787 837 186 75 40 chr17 26521874 26521931 -68750720 + URR1B DNA MER1_type 130 180 -45 2 787 606 164 0 0 chr17 26523388 26523510 -68749141 + (TG)n Simple_repeat Simple_repeat 2 123 0 2 787 595 282 37 31 chr17 26523887 26524048 -68748603 + RSINE1 SINE B4 2 163 -2 2 787 235 327 106 0 chr17 26524255 26524368 -68748283 - MIRc SINE MIR -57 211 87 2 787 232 267 71 45 chr17 26525549 26525664 -68746987 - L1MB2 LINE L1 -20 6160 6032 2 787 204 208 0 70 chr17 26525666 26525723 -68746928 - L2b LINE L2 -11 3364 3312 2 787 2050 152 66 0 chr17 26527018 26527380 -68745271 - ORR1B1 LTR MaLR -8 386 1 2 787 246 205 398 8 chr17 26527380 26527503 -68745148 + MTE2a LTR MaLR 76 246 -133 2 787 396 0 0 0 chr17 26527567 26527611 -68745040 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 787 318 308 38 9 chr17 26528531 26528636 -68744015 + MIR3 SINE MIR 14 121 -87 3 787 286 188 0 0 chr17 26528736 26528784 -68743867 + ID SINE ID 26 73 -151 3 787 206 174 43 0 chr17 26528880 26528926 -68743725 + MIR SINE MIR 100 147 -61 3 787 417 172 9 3 chr17 26528986 26529075 -68743576 - ORR1B1 LTR MaLR -283 91 1 3 787 246 205 398 8 chr17 26529075 26529198 -68743453 + MTE2a LTR MaLR 76 246 -133 3 787 180 0 0 0 chr17 26529262 26529282 -68743369 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 787 253 222 0 24 chr17 26530064 26530147 -68742504 + (TG)n Simple_repeat Simple_repeat 2 82 0 3 787 272 209 17 6 chr17 26530160 26530338 -68742313 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 787 506 229 29 0 chr17 26530361 26530536 -68742115 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 787 473 181 11 11 chr17 26530610 26530789 -68741862 + (TG)n Simple_repeat Simple_repeat 2 180 0 3 787 470 266 13 10 chr17 26531189 26531338 -68741313 + L1MB7 LINE L1 5731 5882 -418 3 787 226 297 71 18 chr17 26531472 26531585 -68741066 + L1MB7 LINE L1 6054 6172 -6 3 787 1197 54 0 20 chr17 26531617 26531768 -68740883 - B1_Mus1 SINE Alu 0 148 1 4 787 1137 124 82 5 chr17 26532303 26532498 -68740153 + URR1A DNA MER1_type 17 226 0 4 787 347 230 22 22 chr17 26532495 26532516 -68740135 + PB1 SINE Alu 35 55 -72 4 787 1162 44 0 0 chr17 26532516 26532652 -68739999 + B1_Mus1 SINE Alu 2 137 -11 4 787 573 61 0 0 chr17 26532652 26532734 -68739917 + (CAAAA)n Simple_repeat Simple_repeat 2 83 0 4 787 347 183 70 0 chr17 26532734 26532805 -68739846 + PB1D10 SINE Alu 42 117 0 4 787 944 106 25 0 chr17 26534050 26534332 -68738319 + (TC)n Simple_repeat Simple_repeat 1 288 0 4 787 323 196 37 15 chr17 26535475 26535610 -68737041 + (TGGA)n Simple_repeat Simple_repeat 2 139 0 4 787 393 337 86 0 chr17 26536029 26536231 -68736420 - MIRb SINE MIR -8 260 38 4 787 727 310 54 78 chr17 26536328 26536622 -68736029 - B4A SINE B4 -2 290 4 4 787 2289 131 50 6 chr17 26537879 26538241 -68734410 - ORR1C1 LTR MaLR 0 378 1 5 787 382 279 41 75 chr17 26538659 26538806 -68733845 + L1MA9 LINE L1 5804 5945 -367 5 787 256 261 34 11 chr17 26538831 26538920 -68733731 + L1MA9 LINE L1 6086 6176 -115 5 787 228 179 13 130 chr17 26539119 26539196 -68733455 + ID4 SINE ID 5 72 -11 5 787 246 232 0 0 chr17 26539208 26539264 -68733387 + L1MEc LINE L1 1124 1179 -5221 5 787 323 178 137 0 chr17 26539270 26539343 -68733308 - ID4_ SINE ID 0 83 1 5 787 354 258 113 0 chr17 26541670 26541794 -68730857 + MIRb SINE MIR 50 187 -81 5 787 705 199 13 33 chr17 26543581 26543732 -68728919 + B1_Mur2 SINE Alu 1 148 -1 5 787 236 304 25 12 chr17 26543867 26543947 -68728704 - MIRc SINE MIR -104 164 84 5 787 561 275 65 16 chr17 26544500 26544770 -68727881 - L1M5 LINE L1 -2279 5603 5313 5 787 362 189 110 11 chr17 26544806 26544897 -68727754 - B4A SINE B4 -7 285 186 5 787 487 282 8 0 chr17 26544920 26545044 -68727607 - B4A SINE B4 -166 126 2 5 787 466 246 4 0 chr17 26545106 26545215 -68727436 - B1F SINE Alu -8 112 1 6 787 891 245 17 68 chr17 26545370 26545606 -68727045 - ID_B1 SINE B4 0 224 1 6 787 377 20 20 0 chr17 26546122 26546172 -68726479 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 787 275 365 32 0 chr17 26546181 26546307 -68726344 - L1M5 LINE L1 -1549 4597 4468 5 787 336 320 87 27 chr17 26546955 26547138 -68725513 + MIR SINE MIR 23 216 -46 6 787 1346 51 6 0 chr17 26547175 26547350 -68725301 + (TCTA)n Simple_repeat Simple_repeat 2 177 0 6 787 215 250 0 0 chr17 26547862 26547910 -68724741 + L4 LINE RTE 1763 1810 -219 6 787 262 342 0 0 chr17 26548304 26548380 -68724271 - ID4 SINE ID 0 83 8 6 787 222 239 56 14 chr17 26548380 26548452 -68724199 - PB1D10 SINE Alu -2 115 41 6 787 207 273 0 57 chr17 26549603 26549673 -68722978 + CT-rich Low_complexity Low_complexity 2 67 0 6 787 309 397 58 19 chr17 26550409 26550666 -68721985 - Kanga2_a DNA Tc2 -539 349 83 6 787 187 348 161 31 chr17 26551128 26551321 -68721330 + L2b LINE L2 3136 3353 -22 7 787 46 79 0 21 chr17 26551734 26551876 -68720775 + GC_rich Low_complexity Low_complexity 1 139 0 7 787 486 0 0 0 chr17 26552747 26552801 -68719850 + (TC)n Simple_repeat Simple_repeat 2 55 0 7 787 297 0 0 0 chr17 26552801 26552833 -68719818 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 787 360 348 6 117 chr17 26554321 26554500 -68718151 - MIRb SINE MIR -76 192 34 7 787 257 150 33 16 chr17 26555352 26555413 -68717238 + (CAGAGA)n Simple_repeat Simple_repeat 2 63 0 7 787 766 238 47 36 chr17 26556461 26556653 -68715998 - B3A SINE B2 -1 197 4 7 787 231 61 0 0 chr17 26556653 26556686 -68715965 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 787 536 272 43 37 chr17 26556688 26556852 -68715799 - B3A SINE B2 -32 166 2 7 787 271 186 26 79 chr17 26556859 26556935 -68715716 - PB1D10 SINE Alu -5 112 41 7 787 300 323 106 19 chr17 26558519 26558680 -68713971 - MIR SINE MIR -30 232 58 8 787 1202 61 0 7 chr17 26559922 26560070 -68712581 - B1_Mus1 SINE Alu -1 147 1 8 787 304 319 28 55 chr17 26560172 26560317 -68712334 + MIRc SINE MIR 20 158 -104 8 787 405 0 0 0 chr17 26562644 26562689 -68709962 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 787 1226 61 0 0 chr17 26563457 26563604 -68709047 + B1_Mus2 SINE Alu 1 147 0 8 787 183 80 0 0 chr17 26563604 26563629 -68709022 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 8 787 220 333 40 0 chr17 26563750 26563849 -68708802 - MIR SINE MIR -139 123 21 8 787 310 345 55 30 chr17 26563883 26564083 -68708568 - MIRb SINE MIR -15 253 49 8 787 294 357 90 30 chr17 26567219 26567551 -68705100 + L2b LINE L2 3016 3367 -8 8 787 188 143 0 0 chr17 26569390 26569425 -68703226 - MIR SINE MIR -119 143 109 8 787 567 0 0 0 chr17 26570876 26570939 -68701712 + (CCA)n Simple_repeat Simple_repeat 3 65 0 9 787 886 210 82 0 chr17 26571178 26571373 -68701278 - B3 SINE B2 -4 212 2 9 787 290 272 47 102 chr17 26571683 26571707 -68700944 + MT2B LTR ERVL 138 154 -447 9 787 739 204 0 7 chr17 26571707 26571845 -68700806 + B1_Mur1 SINE Alu 3 139 -10 9 787 394 318 80 17 chr17 26572255 26572431 -68700220 + MER53 DNA hAT 1 187 -6 9 787 911 196 0 7 chr17 26573655 26573817 -68698834 + B3 SINE B2 1 159 -57 9 787 227 79 26 0 chr17 26573817 26573855 -68698796 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 787 593 243 26 67 chr17 26573855 26573886 -68698765 + B2_Mm2 SINE B2 150 185 -10 9 787 201 146 49 0 chr17 26576380 26576421 -68696230 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 9 787 31 58 0 0 chr17 26576437 26576489 -68696162 + AT_rich Low_complexity Low_complexity 1 52 0 9 787 250 115 19 19 chr17 26576579 26576617 -68696034 + T-rich Low_complexity Low_complexity 16 54 0 9 787 1163 68 0 20 chr17 26576617 26576768 -68695883 - B1_Mus1 SINE Alu 0 148 1 1 787 250 115 19 19 chr17 26576768 26576782 -68695869 + T-rich Low_complexity Low_complexity 2 15 0 1 787 360 0 0 0 chr17 26580020 26580060 -68692591 + (TTG)n Simple_repeat Simple_repeat 2 41 0 1 787 341 248 57 41 chr17 26580374 26580496 -68692155 - L1M5 LINE L1 -2942 3204 3081 1 787 616 167 88 29 chr17 26580500 26580636 -68692015 - B1_Mus1 SINE Alu 0 148 5 1 787 220 286 111 28 chr17 26581502 26581610 -68691041 - MIR SINE MIR -101 161 45 1 787 196 77 0 0 chr17 26582218 26582244 -68690407 + L2b LINE L2 3330 3355 -20 1 787 221 244 88 51 chr17 26582329 26582442 -68690209 - L2c LINE L2 -6 3420 3290 1 787 333 0 0 0 chr17 26582864 26582901 -68689750 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 787 992 93 29 0 chr17 26584599 26584739 -68687912 + B1_Mus1 SINE Alu 5 148 0 1 787 273 206 48 0 chr17 26585347 26585410 -68687241 - MTE-int LTR MaLR -878 702 637 1 787 502 333 130 55 chr17 26585392 26585722 -68686929 + MTE-int LTR MaLR 317 671 -909 1 787 976 297 50 16 chr17 26585682 26586003 -68686648 - MTE-int LTR MaLR -1244 336 5 1 787 668 273 232 4 chr17 26586015 26586265 -68686386 - MTEb LTR MaLR -72 307 1 1 787 1664 255 31 5 chr17 26586502 26586892 -68685759 + MTD LTR MaLR 5 404 -15 1 787 258 343 0 0 chr17 26587476 26587546 -68685105 + polypurine Low_complexity Low_complexity 2 71 0 1 787 252 294 84 32 chr17 26588295 26588390 -68684261 + MER44B DNA MER2_type 13 112 -438 1 787 409 290 61 14 chr17 26588408 26588555 -68684096 + MER44B DNA MER2_type 196 349 -201 1 787 5493 121 37 58 chr17 26590416 26591337 -68681314 + RMER19B LTR ERVK 1 902 0 1 787 5564 91 49 62 chr17 26591544 26592462 -68680189 + RMER17A2 LTR ERVK 1 906 0 1 787 483 310 12 25 chr17 26592598 26592760 -68679891 + RSINE1 SINE B4 4 163 -2 1 787 229 275 57 14 chr17 26593002 26593072 -68679579 + ID4 SINE ID 8 80 -3 1 787 322 317 99 50 chr17 26593099 26593341 -68679310 - L2b LINE L2 -96 3279 3026 1 787 297 161 75 0 chr17 26594398 26594559 -68678092 + (CAGA)n Simple_repeat Simple_repeat 4 176 0 1 787 180 0 0 0 chr17 26594582 26594602 -68678049 + (GA)n Simple_repeat Simple_repeat 2 21 0 1 787 180 384 127 12 chr17 26595651 26595817 -68676834 + L2 LINE L2 2725 2909 -510 1 787 580 286 40 68 chr17 26596139 26596387 -68676264 + MER2 DNA MER2_type 83 323 -22 1 787 269 345 6 63 chr17 26596537 26596695 -68675956 - MLT1A0 LTR MaLR -215 150 2 1 787 1379 79 17 0 chr17 26596956 26597133 -68675518 + B2_Mm2 SINE B2 2 181 -14 1 787 345 214 14 0 chr17 26597936 26598006 -68674645 + MTEa LTR MaLR 10 80 -299 1 787 246 32 0 0 chr17 26598402 26598433 -68674218 + (GA)n Simple_repeat Simple_repeat 1 31 0 1 787 350 261 11 0 chr17 26598447 26598535 -68674116 - PB1D10 SINE Alu -14 103 15 1 787 447 35 0 0 chr17 26599115 26599172 -68673479 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 787 239 320 92 23 chr17 26599295 26599426 -68673225 - MLT1A0 LTR MaLR -219 146 7 1 787 909 304 134 10 chr17 26599916 26600334 -68672317 - Tigger7 DNA MER2_type -1890 601 132 1 787 203 321 48 24 chr17 26600674 26600757 -68671894 - MIR SINE MIR -77 185 101 1 787 231 36 0 0 chr17 26600874 26600902 -68671749 + (CAG)n Simple_repeat Simple_repeat 1 28 0 1 787 256 333 35 17 chr17 26601681 26601797 -68670854 + MIR SINE MIR 31 148 -114 1 787 1364 88 5 35 chr17 26604172 26604372 -68668279 - B2_Mm2 SINE B2 0 195 2 1 787 1348 45 72 11 chr17 26604482 26604663 -68667988 - B2_Mm1a SINE B2 0 193 2 1 787 204 40 0 0 chr17 26605357 26605382 -68667269 + (CACAC)n Simple_repeat Simple_repeat 3 27 0 1 787 222 357 0 43 chr17 26606368 26606529 -68666122 + C-rich Low_complexity Low_complexity 2 155 0 1 787 314 176 9 73 chr17 26606372 26606482 -68666169 + CT-rich Low_complexity Low_complexity 1 103 0 1 787 2082 236 25 49 chr17 26606947 26607035 -68665616 - RLTR20A LTR ERVK -1 540 452 1 787 441 0 0 0 chr17 26607035 26607084 -68665567 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 787 2082 236 25 49 chr17 26607084 26607548 -68665103 - RLTR20A LTR ERVK -90 451 1 1 788 243 323 67 8 chr17 26608218 26608340 -68664311 + MIRm SINE MIR 59 187 -81 1 788 185 156 0 0 chr17 26608638 26608670 -68663981 + MIRc SINE MIR 116 147 -121 1 788 253 367 33 16 chr17 26608718 26608840 -68663811 + MIR SINE MIR 84 207 -55 1 788 23 0 0 0 chr17 26609069 26609092 -68663559 + AT_rich Low_complexity Low_complexity 1 23 0 1 788 346 289 52 98 chr17 26609418 26609445 -68663206 + B4A SINE B4 1 27 -265 1 788 1009 202 9 71 chr17 26609445 26609669 -68662982 + B3 SINE B2 1 210 -6 1 788 346 291 79 92 chr17 26609669 26609740 -68662911 + B4A SINE B4 28 196 -96 1 788 701 138 92 0 chr17 26609740 26609870 -68662781 + B1_Mur4 SINE Alu 8 149 -1 1 788 346 291 79 92 chr17 26609870 26609889 -68662762 + B4A SINE B4 197 246 -46 1 788 230 245 0 0 chr17 26609929 26609978 -68662673 - MIR SINE MIR -119 143 95 1 788 854 212 15 25 chr17 26610080 26610278 -68662373 + ID_B1 SINE B4 1 196 -28 1 788 875 189 178 0 chr17 26610527 26610718 -68661933 - URR1B DNA MER1_type 0 225 1 1 788 552 121 0 0 chr17 26611381 26611472 -68661179 + (CA)n Simple_repeat Simple_repeat 2 92 0 1 788 578 258 85 92 chr17 26611805 26612099 -68660552 + B4A SINE B4 1 292 0 1 788 246 324 0 0 chr17 26612883 26612957 -68659694 + B4A SINE B4 217 290 -2 1 788 212 122 24 0 chr17 26613005 26613046 -68659605 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 788 259 204 24 18 chr17 26613138 26613303 -68659348 + (CAGAGA)n Simple_repeat Simple_repeat 5 170 0 1 788 2411 111 42 15 chr17 26614367 26614769 -68657882 + MTC LTR MaLR 1 413 -8 1 788 190 274 53 27 chr17 26614802 26614877 -68657774 - L2 LINE L2 -810 2609 2533 1 788 191 294 143 29 chr17 26614891 26614996 -68657655 - MIR SINE MIR -127 135 19 1 788 497 16 16 0 chr17 26615021 26615083 -68657568 + (TTTTG)n Simple_repeat Simple_repeat 5 67 0 1 788 330 233 0 64 chr17 26615083 26615161 -68657490 - PB1D10 SINE Alu -14 103 31 1 788 198 354 49 0 chr17 26616290 26616372 -68656279 + MER5A DNA MER1_type 103 188 -1 1 788 188 308 25 13 chr17 26616372 26616445 -68656206 + L2 LINE L2 2805 2878 -541 1 788 307 253 36 0 chr17 26617803 26617886 -68654765 + CT-rich Low_complexity Low_complexity 3 88 0 1 788 228 309 15 0 chr17 26618689 26618757 -68653894 + (CACG)n Simple_repeat Simple_repeat 4 72 0 1 788 720 217 7 0 chr17 26619765 26619908 -68652743 - B1_Mur2 SINE Alu -2 147 4 1 788 1186 49 0 0 chr17 26620184 26620328 -68652323 + B1_Mus2 SINE Alu 2 145 -2 1 788 207 0 0 0 chr17 26620328 26620351 -68652300 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 788 724 294 135 48 chr17 26621315 26621811 -68650840 + L1MB8 LINE L1 5640 6178 0 1 788 243 0 0 0 chr17 26622387 26622414 -68650237 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1 788 396 224 65 0 chr17 26622549 26622656 -68649995 + PB1D7 SINE Alu 1 114 -6 1 788 506 301 72 21 chr17 26622655 26622848 -68649803 + MER2 DNA MER2_type 82 284 -61 1 788 1064 68 7 39 chr17 26623292 26623445 -68649206 + B1_Mus1 SINE Alu 1 148 0 1 788 225 132 0 0 chr17 26623447 26623485 -68649166 + (GAAA)n Simple_repeat Simple_repeat 3 40 0 1 788 622 189 206 0 chr17 26623570 26623745 -68648906 + B3 SINE B2 1 211 -5 1 788 295 223 161 91 chr17 26623823 26623966 -68648685 + B4 SINE B4 69 221 -71 1 788 662 173 87 0 chr17 26623842 26623969 -68648682 + B1_Mur2 SINE Alu 10 147 -2 1 788 23 0 0 0 chr17 26624045 26624068 -68648583 + AT_rich Low_complexity Low_complexity 1 23 0 1 788 1309 214 129 29 chr17 26624233 26624614 -68648037 - MTD LTR MaLR 0 419 1 1 788 190 336 9 36 chr17 26625462 26625573 -68647078 + L2c LINE L2 3057 3164 -223 1 788 309 333 17 0 chr17 26625661 26625778 -68646873 + MIRb SINE MIR 13 131 -137 1 788 261 57 0 0 chr17 26628350 26628385 -68644266 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 788 207 0 0 0 chr17 26628530 26628553 -68644098 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 788 1087 66 0 0 chr17 26628553 26628690 -68643961 - B1_Mus1 SINE Alu -10 138 2 1 788 616 302 26 10 chr17 26628712 26628906 -68643745 - B3 SINE B2 0 216 20 1 788 261 288 0 0 chr17 26628924 26628990 -68643661 - ID4_ SINE ID -17 66 1 1 788 1009 161 94 10 chr17 26629737 26629938 -68642713 - Lx5 LINE L1 -1 7049 6832 1 788 1929 147 22 87 chr17 26630028 26630430 -68642221 + RLTR1B LTR ERV1 137 512 0 1 788 327 122 0 0 chr17 26630453 26630502 -68642149 - Lx4A LINE L1 -257 6801 6753 1 788 231 318 57 0 chr17 26630510 26630598 -68642053 + Tigger7 DNA MER2_type 314 406 -2085 1 788 278 309 0 21 chr17 26630632 26630713 -68641938 + B3A SINE B2 2 80 -118 1 788 3682 43 20 4 chr17 26630713 26631201 -68641450 - LTRIS2 LTR ERV1 0 564 69 1 788 243 225 23 70 chr17 26631224 26631310 -68641341 + B3A SINE B2 110 191 -7 1 788 1312 194 121 123 chr17 26631446 26631968 -68640683 - RLTR11A LTR ERVK -1 527 7 1 788 481 219 0 20 chr17 26632060 26632158 -68640493 - PB1D10 SINE Alu 0 117 22 1 788 234 133 22 22 chr17 26632201 26632247 -68640404 - LTR40a LTR ERVL -400 119 74 1 788 381 329 58 0 chr17 26632790 26632927 -68639724 - MIRm SINE MIR -98 178 34 1 788 226 223 55 118 chr17 26633050 26633177 -68639474 + RMER15 LTR ERVL 29 147 -428 1 788 397 314 22 7 chr17 26633261 26633399 -68639252 + RMER15 LTR ERVL 422 561 -14 1 788 248 330 87 0 chr17 26635245 26635418 -68637233 - L1MA6 LINE L1 0 6300 6113 1 788 306 337 126 46 chr17 26635636 26636009 -68636642 + L1M4c LINE L1 631 1033 -5445 2 788 369 310 30 30 chr17 26636068 26636201 -68636450 + RSINE1 SINE B4 22 154 -11 2 788 388 228 65 0 chr17 26636269 26636361 -68636290 + PB1D9 SINE Alu 13 110 -10 2 788 345 100 0 0 chr17 26636364 26636414 -68636237 + (TTAA)n Simple_repeat Simple_repeat 3 52 0 2 788 240 186 186 0 chr17 26636419 26636489 -68636162 + PB1 SINE Alu 45 127 0 2 788 379 194 15 0 chr17 26636509 26636576 -68636075 + ID4_ SINE ID 3 70 -13 2 788 368 276 418 27 chr17 26636612 26636885 -68635766 + L1M4c LINE L1 1302 1756 -4646 2 788 496 183 8 8 chr17 26636885 26636922 -68635729 + polypurine Low_complexity Low_complexity 1 36 0 2 788 1192 84 0 17 chr17 26636922 26637103 -68635548 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 2 788 496 183 8 8 chr17 26637103 26637186 -68635465 + polypurine Low_complexity Low_complexity 37 120 0 2 788 1871 215 49 11 chr17 26637239 26637686 -68634965 + RLTR11A2 LTR ERVK 19 482 -45 2 788 181 156 0 0 chr17 26638922 26638954 -68633697 - MIRc SINE MIR -124 144 113 2 788 204 294 15 0 chr17 26639189 26639257 -68633394 - MIRb SINE MIR -84 184 116 2 788 194 0 39 0 chr17 26639642 26639668 -68632983 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 788 488 229 54 13 chr17 26646235 26646358 -68626293 - PB1D9 SINE Alu -21 128 6 2 788 266 262 83 0 chr17 26647968 26648052 -68624599 + MIRb SINE MIR 78 168 -100 2 788 927 131 7 0 chr17 26648227 26648372 -68624279 + B1_Mus1 SINE Alu 2 147 -1 2 788 184 318 22 56 chr17 26649051 26649141 -68623510 + L2c LINE L2 3278 3364 -23 2 788 313 183 46 25 chr17 26649576 26649676 -68622975 - MIRc SINE MIR -21 187 84 2 788 507 318 132 45 chr17 26652044 26652374 -68620277 - MLT1C LTR MaLR -33 434 52 2 788 188 98 65 16 chr17 26653079 26653141 -68619510 + T-rich Low_complexity Low_complexity 2 66 0 2 788 718 206 35 0 chr17 26653325 26653466 -68619185 - B1_Mur3 SINE Alu 0 149 4 2 788 243 0 0 0 chr17 26654391 26654418 -68618233 + (GA)n Simple_repeat Simple_repeat 2 28 0 2 788 867 324 51 9 chr17 26654440 26654755 -68617896 - MER2 DNA MER2_type -14 331 4 2 788 323 319 69 0 chr17 26654794 26654954 -68617697 - L2a LINE L2 -194 3232 3062 2 788 327 321 9 26 chr17 26654978 26655093 -68617558 + L1M4 LINE L1 4158 4270 -1876 2 788 753 221 96 45 chr17 26655101 26655300 -68617351 + B3 SINE B2 1 209 -7 2 788 630 307 43 19 chr17 26655533 26655858 -68616793 + L1M4 LINE L1 4426 4758 -1388 2 788 1862 183 60 8 chr17 26656581 26656967 -68615684 - MTC LTR MaLR -13 408 3 2 788 324 226 52 31 chr17 26656972 26657068 -68615583 + RSINE1 SINE B4 68 165 0 2 788 294 173 30 0 chr17 26657136 26657212 -68615439 + L1M4 LINE L1 4964 5041 -1105 2 788 255 316 87 9 chr17 26657654 26657769 -68614882 + PB1 SINE Alu 1 124 -3 2 788 321 280 82 22 chr17 26657824 26657959 -68614692 + RSINE1 SINE B4 3 145 -20 2 788 21 36 0 0 chr17 26657992 26658020 -68614631 + AT_rich Low_complexity Low_complexity 1 28 0 2 788 1163 68 0 0 chr17 26658029 26658177 -68614474 + B1_Mus1 SINE Alu 1 148 0 2 788 192 135 0 0 chr17 26658178 26658215 -68614436 + (A)n Simple_repeat Simple_repeat 1 37 0 2 788 645 291 105 65 chr17 26658265 26658713 -68613938 + L1M4 LINE L1 5295 5760 -418 2 788 606 203 148 0 chr17 26658888 26659016 -68613635 + B1_Mur1 SINE Alu 2 148 -1 2 788 279 0 0 0 chr17 26659078 26659109 -68613542 + (GA)n Simple_repeat Simple_repeat 1 31 0 2 788 180 0 0 0 chr17 26659306 26659326 -68613325 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2 788 21 36 0 0 chr17 26659349 26659377 -68613274 + AT_rich Low_complexity Low_complexity 1 28 0 2 788 248 214 0 0 chr17 26660117 26660159 -68612492 + G-rich Low_complexity Low_complexity 5 46 0 2 788 880 136 23 6 chr17 26660159 26660336 -68612315 + GA-rich Low_complexity Low_complexity 1 180 0 2 788 287 237 0 7 chr17 26661230 26661366 -68611285 + (CA)n Simple_repeat Simple_repeat 2 136 0 2 788 1714 271 71 47 chr17 26662425 26663084 -68609567 + RCHARR1 DNA MER1_type 128 802 -172 2 788 342 0 0 0 chr17 26663093 26663131 -68609520 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 788 936 181 26 119 chr17 26663135 26663522 -68609129 + ORR1D1 LTR MaLR 44 367 0 2 788 813 203 104 0 chr17 26663523 26663705 -68608946 - B3 SINE B2 -15 201 1 2 788 847 205 98 4 chr17 26663707 26663932 -68608719 + RCHARR1 DNA MER1_type 728 973 -1 2 788 206 306 159 26 chr17 26665515 26665666 -68606985 + MIRb SINE MIR 97 267 -1 2 788 199 315 0 27 chr17 26666329 26666404 -68606247 - MIRb SINE MIR -97 171 99 2 788 341 297 113 28 chr17 26667977 26668119 -68604532 + MIRb SINE MIR 7 160 -108 2 788 327 274 62 151 chr17 26668253 26668511 -68604140 - B4A SINE B4 -18 274 40 2 788 279 204 17 14 chr17 26668532 26668606 -68604045 - B1F1 SINE Alu -50 77 6 2 788 475 204 143 8 chr17 26668729 26668862 -68603789 + Tigger5 DNA MER2_type 2202 2352 -54 2 788 417 284 0 0 chr17 26668951 26669053 -68603598 - MIRb SINE MIR -132 136 35 2 788 274 314 9 19 chr17 26669618 26669725 -68602926 + PB1D7 SINE Alu 1 106 -14 2 788 402 39 0 0 chr17 26669725 26669777 -68602874 + (CAAAA)n Simple_repeat Simple_repeat 4 55 0 2 788 213 275 214 14 chr17 26670538 26670678 -68601973 + MIRb SINE MIR 35 202 -66 2 788 353 202 34 0 chr17 26671390 26671507 -68601144 + MIRm SINE MIR 51 179 -89 2 788 186 279 125 23 chr17 26672590 26672678 -68599973 - L2a LINE L2 -5 3421 3325 2 788 214 391 39 15 chr17 26673567 26673697 -68598954 - L2a LINE L2 0 3426 3294 2 788 249 312 99 18 chr17 26673746 26673857 -68598794 + MER63B DNA AcHobo 307 426 -10 2 788 731 259 16 5 chr17 26675660 26675817 -68596834 + B3A SINE B2 1 159 -39 2 788 324 0 0 0 chr17 26675817 26675853 -68596798 + (TC)n Simple_repeat Simple_repeat 2 37 0 2 788 731 259 16 5 chr17 26675853 26675885 -68596766 + B3A SINE B2 160 192 -6 2 788 591 327 149 46 chr17 26675888 26676343 -68596308 + L1MB1 LINE L1 4367 4868 -1278 2 788 369 259 0 0 chr17 26676380 26676511 -68596140 + (CA)n Simple_repeat Simple_repeat 2 132 0 2 788 351 318 149 12 chr17 26676526 26676774 -68595877 + L1MB1 LINE L1 4958 5239 -907 2 788 327 312 62 7 chr17 26676786 26677002 -68595649 + L1MB1 LINE L1 5254 5485 -709 2 788 432 334 62 51 chr17 26677402 26677642 -68595009 + L1MB1 LINE L1 5445 5688 -495 2 788 1515 53 0 0 chr17 26677667 26677857 -68594794 - B2_Mm1a SINE B2 -2 191 2 2 788 222 136 0 0 chr17 26678189 26678233 -68594418 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 2 788 432 97 0 0 chr17 26678244 26678306 -68594345 + (CA)n Simple_repeat Simple_repeat 2 63 0 2 788 855 273 207 14 chr17 26678415 26678733 -68593918 + Lx9 LINE L1 7119 7456 -188 2 788 405 0 0 0 chr17 26678733 26678778 -68593873 + (CATA)n Simple_repeat Simple_repeat 4 48 0 2 788 855 273 207 14 chr17 26678778 26678879 -68593772 + Lx9 LINE L1 7457 7618 -26 2 788 431 308 60 20 chr17 26678994 26679193 -68593458 + L1MB1 LINE L1 5785 5991 -177 2 788 21 0 0 0 chr17 26679226 26679247 -68593404 + GC_rich Low_complexity Low_complexity 1 21 0 2 788 510 250 25 0 chr17 26679251 26679371 -68593280 - RSINE1 SINE B4 -33 132 10 2 788 292 163 0 19 chr17 26679488 26679547 -68593104 - MTD LTR MaLR -322 99 42 2 788 313 316 129 48 chr17 26680976 26681162 -68591489 + L1ME3B LINE L1 5914 6114 -126 2 788 294 273 157 119 chr17 26682435 26682772 -68589879 - ORR1E LTR MaLR -5 354 5 2 788 1315 65 11 11 chr17 26683075 26683263 -68589388 + B2_Mm2 SINE B2 5 192 -3 2 788 21 0 0 0 chr17 26683345 26683366 -68589285 + AT_rich Low_complexity Low_complexity 1 21 0 2 788 950 157 0 0 chr17 26683370 26683517 -68589134 + B1_Mus2 SINE Alu 1 147 0 2 788 513 84 0 0 chr17 26683724 26683795 -68588856 + (GA)n Simple_repeat Simple_repeat 2 72 0 2 788 1280 94 10 0 chr17 26683872 26684064 -68588587 - RLTR15 LTR ERVK 0 359 166 2 788 271 197 121 0 chr17 26684046 26684112 -68588539 - RLTR15 LTR ERVK -120 239 166 2 788 259 212 121 0 chr17 26684094 26684160 -68588491 - RLTR15 LTR ERVK -120 239 166 2 788 691 188 38 7 chr17 26684161 26684400 -68588251 + RLTR11A2 LTR ERVK 249 528 0 2 788 204 194 59 88 chr17 26686129 26686197 -68586454 - MIR SINE MIR -62 146 81 2 788 202 291 10 93 chr17 26686857 26686983 -68585668 - MIRm SINE MIR -116 152 36 2 788 785 209 135 10 chr17 26687022 26687215 -68585436 + URR1B DNA MER1_type 9 225 0 2 788 1176 93 6 0 chr17 26687630 26687802 -68584849 - B2_Mm2 SINE B2 -22 173 1 2 788 823 303 23 29 chr17 26687925 26688231 -68584420 - L1MC4 LINE L1 -883 7159 6856 2 788 664 247 32 0 chr17 26689318 26689472 -68583179 - B3A SINE B2 -39 159 1 2 788 476 156 117 18 chr17 26689902 26690013 -68582638 - B1_Mus1 SINE Alu -1 147 26 2 788 541 201 29 5 chr17 26690218 26690357 -68582294 - ORR1D1 LTR MaLR -1 373 230 2 788 382 242 46 46 chr17 26690414 26690442 -68582209 - CYRA11_Mm Unknown Y-chromosome -277 340 173 2 788 809 143 14 0 chr17 26690442 26690582 -68582069 + URR1B DNA MER1_type 83 224 -1 2 788 735 154 0 16 chr17 26690585 26690710 -68581941 - B1_Mur2 SINE Alu -26 123 1 2 788 954 219 24 10 chr17 26690710 26690917 -68581734 - ORR1D1 LTR MaLR -164 210 1 2 788 1183 216 238 9 chr17 26690925 26691032 -68581619 - ORR1D1-int LTR MaLR -9 1361 1189 2 788 658 208 20 27 chr17 26691032 26691180 -68581471 + B1_Mus1 SINE Alu 1 147 -1 2 788 1183 216 238 9 chr17 26691180 26691404 -68581247 - ORR1D1-int LTR MaLR -182 1188 955 2 788 602 291 109 50 chr17 26691669 26691991 -68580660 - ORR1E LTR MaLR -18 341 1 2 788 202 333 0 0 chr17 26692142 26692220 -68580431 + L2c LINE L2 3087 3164 -223 2 788 329 244 23 11 chr17 26692365 26692452 -68580199 + C-rich Low_complexity Low_complexity 5 92 0 2 788 268 235 0 0 chr17 26693036 26693087 -68579564 - L2a LINE L2 0 3426 3376 2 788 455 323 157 35 chr17 26693184 26693527 -68579124 - MLT1F2 LTR MaLR -109 451 67 2 788 624 259 115 5 chr17 26693744 26693961 -68578690 - MLT1F1 LTR MaLR -14 555 315 2 788 5424 61 12 1 chr17 26694019 26694737 -68577914 + L1_Mus3 LINE L1 5904 6629 -9 2 788 392 283 87 17 chr17 26694740 26694855 -68577796 - MLT1F1 LTR MaLR -402 146 24 2 788 370 89 0 0 chr17 26695137 26695193 -68577458 + B1_Mus1 SINE Alu 1 56 -92 2 788 579 204 54 0 chr17 26695195 26695362 -68577289 + (CAGAGA)n Simple_repeat Simple_repeat 1 176 0 2 788 213 97 0 0 chr17 26695362 26695393 -68577258 + B1_Mus2 SINE Alu 42 72 -75 2 788 192 97 0 0 chr17 26695393 26695424 -68577227 + (A)n Simple_repeat Simple_repeat 1 31 0 3 788 398 20 0 19 chr17 26695433 26695485 -68577166 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 3 788 729 103 37 0 chr17 26695500 26695607 -68577044 + L1_Mus3 LINE L1 6151 6261 -377 3 788 303 77 0 0 chr17 26695605 26695644 -68577007 - L1_Mus3 LINE L1 -130 6508 6470 3 788 379 262 175 0 chr17 26696072 26696175 -68576476 - MLT1J LTR MaLR -333 179 59 3 788 1146 61 0 7 chr17 26696225 26696373 -68576278 - B1_Mm SINE Alu 0 147 1 3 788 454 31 31 0 chr17 26696697 26696761 -68575890 + (TGAA)n Simple_repeat Simple_repeat 1 66 0 3 788 460 238 61 27 chr17 26697019 26697166 -68575485 - MTD LTR MaLR 0 419 268 3 788 1017 44 82 0 chr17 26697166 26697301 -68575350 + B1_Mm SINE Alu 2 147 0 3 788 351 0 0 0 chr17 26697302 26697341 -68575310 + (A)n Simple_repeat Simple_repeat 1 39 0 3 788 609 257 118 52 chr17 26697341 26697612 -68575039 - MTD LTR MaLR -130 289 1 3 788 273 203 95 0 chr17 26701356 26701430 -68571221 - ID4 SINE ID -2 81 1 3 788 400 236 17 14 chr17 26702083 26702202 -68570449 - ID4_ SINE ID -27 125 6 3 788 357 24 0 0 chr17 26702645 26702687 -68569964 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 788 321 26 0 0 chr17 26702728 26702766 -68569885 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 788 303 28 0 0 chr17 26702807 26702843 -68569808 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 788 540 0 0 0 chr17 26702883 26702943 -68569708 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 788 1580 131 1 11 chr17 26703292 26703581 -68569070 - RMER6C LTR ERVK -1 689 406 3 788 423 0 0 0 chr17 26703947 26703994 -68568657 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 788 302 288 95 7 chr17 26704754 26704901 -68567750 + L1MD LINE L1 5298 5457 -2538 3 788 255 305 76 8 chr17 26705136 26705255 -68567396 - L1MD2 LINE L1 -210 6149 6023 3 788 409 274 209 4 chr17 26705280 26705529 -68567122 - L1MB1 LINE L1 -7 6161 5862 3 788 701 238 91 22 chr17 26705964 26706239 -68566412 - RLTR15 LTR ERVK -65 294 1 3 788 491 286 6 12 chr17 26706255 26706418 -68566233 - L1MB1 LINE L1 -814 5326 5165 3 788 188 176 203 0 chr17 26708165 26708239 -68564412 - L2b LINE L2 -21 3354 3266 3 788 350 305 22 58 chr17 26708246 26708385 -68564266 - L1MDa LINE L1 -4120 2513 2380 3 788 343 250 52 35 chr17 26709046 26709162 -68563489 + PB1D7 SINE Alu 3 120 0 3 788 333 0 0 0 chr17 26709572 26709609 -68563042 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 788 809 280 136 52 chr17 26709611 26710269 -68562382 - L1M2 LINE L1 -478 5813 5081 3 788 845 174 0 0 chr17 26710269 26710407 -68562244 + B1_Mur3 SINE Alu 2 139 -10 3 788 638 306 89 119 chr17 26710407 26710872 -68561779 - L1M2 LINE L1 -1063 5080 4614 3 788 352 290 81 64 chr17 26711216 26711452 -68561199 - L1M2 LINE L1 -2427 3713 3474 3 788 226 255 108 45 chr17 26711884 26711995 -68560656 + MIRb SINE MIR 114 231 -37 3 788 21 36 0 0 chr17 26712636 26712664 -68559987 + GC_rich Low_complexity Low_complexity 1 28 0 3 788 427 300 147 34 chr17 26712695 26712961 -68559690 - MER44B DNA MER2_type -32 518 223 3 788 242 206 68 28 chr17 26713923 26714025 -68558626 - MIRc SINE MIR -133 143 38 3 788 617 94 131 9 chr17 26714577 26714684 -68557967 + PB1D9 SINE Alu 1 120 0 3 788 201 154 0 0 chr17 26714685 26714724 -68557927 + A-rich Low_complexity Low_complexity 3 41 0 3 788 301 258 65 0 chr17 26714790 26714883 -68557768 - MIR SINE MIR -139 123 25 3 788 294 179 0 0 chr17 26715874 26715930 -68556721 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 788 188 347 19 65 chr17 26716141 26716249 -68556402 + MIRm SINE MIR 45 147 -129 3 788 246 227 91 0 chr17 26716313 26716379 -68556272 - ID4 SINE ID -8 75 4 3 788 259 203 33 33 chr17 26717678 26717739 -68554912 + B1F SINE Alu 89 149 0 3 788 1134 43 0 0 chr17 26717743 26717882 -68554769 + B1_Mus1 SINE Alu 1 139 -9 3 788 203 0 0 36 chr17 26717882 26717910 -68554741 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 788 322 224 131 10 chr17 26717923 26718022 -68554629 + ID_B1 SINE B4 82 192 -32 3 788 225 354 20 33 chr17 26720782 26720934 -68551717 + MIRb SINE MIR 58 207 -61 3 788 290 169 123 0 chr17 26722148 26722213 -68550438 - ID4 SINE ID -6 77 5 3 788 1664 21 0 15 chr17 26722597 26722792 -68549859 - B2_Mm1a SINE B2 0 193 2 3 788 587 121 10 0 chr17 26723210 26723309 -68549342 + (TCTA)n Simple_repeat Simple_repeat 1 100 0 3 788 335 280 183 20 chr17 26723428 26723625 -68549026 + L1MD3 LINE L1 7679 7907 -88 3 788 1131 72 0 0 chr17 26723669 26723807 -68548844 + B1_Mus2 SINE Alu 1 138 -9 3 788 191 61 0 29 chr17 26723807 26723841 -68548810 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 3 788 317 255 74 11 chr17 26723924 26724019 -68548632 + PB1D10 SINE Alu 5 105 -12 3 788 575 92 11 0 chr17 26724020 26724107 -68548544 + (GGA)n Simple_repeat Simple_repeat 1 88 0 3 788 350 295 28 62 chr17 26725120 26725297 -68547354 - MER113 DNA MER1_type 0 521 351 3 788 322 250 28 0 chr17 26725387 26725459 -68547192 + ID4_ SINE ID 2 75 -8 3 788 702 264 169 35 chr17 26725536 26725791 -68546860 + B4A SINE B4 1 289 -3 3 788 424 248 73 14 chr17 26726301 26726431 -68546220 + PB1D9 SINE Alu 7 148 0 3 788 181 320 122 19 chr17 26726643 26726799 -68545852 - MIRm SINE MIR -82 194 23 3 788 266 247 0 53 chr17 26727159 26727215 -68545436 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 3 788 207 0 0 0 chr17 26727215 26727238 -68545413 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 788 266 247 0 53 chr17 26727238 26727275 -68545376 + (TATATG)n Simple_repeat Simple_repeat 3 39 0 3 788 633 168 118 16 chr17 26727298 26727425 -68545226 + B1_Mus2 SINE Alu 1 140 -7 3 788 28 29 0 0 chr17 26727432 26727467 -68545184 + AT_rich Low_complexity Low_complexity 1 35 0 3 788 263 250 28 12 chr17 26728116 26728213 -68544438 - MIR SINE MIR -41 167 71 3 788 1980 134 68 49 chr17 26728217 26728246 -68544405 + RMER4B LTR ERVK 19 39 -546 3 788 1188 36 0 0 chr17 26728246 26728383 -68544268 + B1_Mm SINE Alu 1 137 -10 3 788 441 0 0 0 chr17 26728383 26728432 -68544219 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 3 788 1980 144 64 60 chr17 26728432 26728885 -68543766 + RMER4B LTR ERVK 39 464 -2 3 788 379 292 20 27 chr17 26729051 26729199 -68543452 + L1MC1 LINE L1 5753 5899 -434 3 788 228 291 0 85 chr17 26730157 26730251 -68542400 - L1MC1 LINE L1 -2 6331 6246 3 788 467 240 108 0 chr17 26730423 26730552 -68542099 + B1F1 SINE Alu 6 148 -1 3 788 269 350 19 0 chr17 26730597 26730700 -68541951 - MER117 DNA MER1_type -8 189 85 3 788 531 0 0 0 chr17 26731452 26731511 -68541140 + (TG)n Simple_repeat Simple_repeat 1 59 0 3 788 1078 49 7 0 chr17 26731511 26731653 -68540998 + B2_Mm2 SINE B2 5 147 -48 3 788 280 352 115 44 chr17 26731868 26732233 -68540418 + L2a LINE L2 2964 3354 -21 3 788 252 0 0 0 chr17 26732506 26732534 -68540117 + (TTCC)n Simple_repeat Simple_repeat 2 29 0 3 788 204 301 167 24 chr17 26733772 26733898 -68538753 + MIRb SINE MIR 91 234 -34 3 788 198 0 0 0 chr17 26733908 26733930 -68538721 + (TG)n Simple_repeat Simple_repeat 2 23 0 3 788 197 236 109 0 chr17 26734338 26734393 -68538258 - L2a LINE L2 -275 3151 3091 3 788 584 285 153 3 chr17 26734442 26734770 -68537881 + MER44B DNA MER2_type 63 442 -108 3 788 599 288 5 63 chr17 26735207 26735396 -68537255 + B4A SINE B4 4 181 -111 3 788 352 323 24 24 chr17 26735387 26735514 -68537137 + B4A SINE B4 138 264 -28 3 788 456 332 94 63 chr17 26736932 26737479 -68535172 - L1M5 LINE L1 -576 5603 5056 3 788 328 335 22 28 chr17 26737806 26737984 -68534667 - L1M5 LINE L1 -1432 4714 4538 3 789 203 61 30 0 chr17 26739119 26739152 -68533499 + (AGGGGG)n Simple_repeat Simple_repeat 2 35 0 3 789 802 259 38 43 chr17 26740458 26740668 -68531983 + MTEb LTR MaLR 8 216 -163 3 789 238 215 0 48 chr17 26741109 26741192 -68531459 + T-rich Low_complexity Low_complexity 5 83 0 3 789 366 183 0 0 chr17 26741192 26741263 -68531388 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 789 240 111 0 0 chr17 26741396 26741432 -68531219 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 789 377 246 73 0 chr17 26741512 26741622 -68531029 - B4 SINE B4 -173 119 2 3 789 210 288 53 27 chr17 26741652 26741727 -68530924 - B1_Mur2 SINE Alu -45 104 28 3 789 334 205 110 33 chr17 26741818 26741909 -68530742 - PB1D10 SINE Alu 0 127 30 3 789 393 148 134 12 chr17 26741968 26742050 -68530601 - ID_B1 SINE B4 -8 216 125 3 789 966 119 14 7 chr17 26742113 26742257 -68530394 - B1_Mur3 SINE Alu -2 147 3 3 789 290 347 45 23 chr17 26742814 26742991 -68529660 + L2b LINE L2 3193 3373 -2 3 789 418 214 38 12 chr17 26743492 26743612 -68529039 - L1MC4a LINE L1 -8 7874 7664 3 789 263 326 91 76 chr17 26743752 26744042 -68528609 + ORR1D2 LTR MaLR 71 357 -13 3 789 296 293 199 16 chr17 26744046 26744237 -68528414 - L1MC4a LINE L1 -106 7776 7551 3 789 2555 148 2 17 chr17 26744971 26745390 -68527261 + MTC LTR MaLR 1 413 -8 3 789 254 260 152 12 chr17 26746065 26746150 -68526501 + RSINE1 SINE B4 3 96 -196 3 789 507 60 0 0 chr17 26746150 26746217 -68526434 + (CA)n Simple_repeat Simple_repeat 1 67 0 3 789 985 95 0 81 chr17 26746266 26746410 -68526241 + B1_Mus1 SINE Alu 1 135 -13 3 789 243 88 0 0 chr17 26746410 26746444 -68526207 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 3 789 985 95 0 81 chr17 26746444 26746460 -68526191 + B1_Mus1 SINE Alu 136 148 0 3 789 533 346 105 20 chr17 26746820 26747374 -68525277 + L1MD3 LINE L1 7345 7945 -50 3 789 269 270 126 29 chr17 26748365 26748468 -68524183 - MIRm SINE MIR -1 275 163 3 789 240 272 48 24 chr17 26748866 26748949 -68523702 - L2b LINE L2 -1 3374 3290 3 789 381 117 0 0 chr17 26749633 26749693 -68522958 + (TA)n Simple_repeat Simple_repeat 1 60 0 3 789 402 271 42 20 chr17 26749702 26749834 -68522817 - B1F2 SINE Alu 0 149 7 3 789 423 0 0 0 chr17 26749849 26749896 -68522755 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 789 261 0 0 0 chr17 26752263 26752292 -68520359 + (T)n Simple_repeat Simple_repeat 1 29 0 4 789 1213 68 0 0 chr17 26752295 26752442 -68520209 - B1_Mus2 SINE Alu 0 147 1 4 789 216 256 204 14 chr17 26752471 26752624 -68520027 + MIR3 SINE MIR 15 198 -10 4 789 302 235 15 0 chr17 26752969 26753037 -68519614 - B3 SINE B2 0 216 148 4 789 848 250 5 15 chr17 26753092 26753291 -68519360 - B3 SINE B2 -13 203 7 4 789 291 289 181 38 chr17 26754849 26754982 -68517669 + RSINE1 SINE B4 12 163 -2 4 789 3399 38 5 0 chr17 26756083 26756477 -68516174 + MTA_Mm LTR MaLR 1 396 0 4 789 439 352 70 62 chr17 26757038 26757280 -68515371 - MER2 DNA MER2_type -80 265 22 4 789 673 153 32 0 chr17 26757507 26757664 -68514987 + (CA)n Simple_repeat Simple_repeat 1 162 0 4 789 276 231 38 13 chr17 26757967 26758046 -68514605 - MIRc SINE MIR -118 150 70 4 789 240 344 39 18 chr17 26758952 26759067 -68513584 + MIRc SINE MIR 45 164 -112 4 789 433 320 69 10 chr17 26759500 26759557 -68513094 - B3 SINE B2 -2 214 155 4 789 465 19 0 0 chr17 26759557 26759611 -68513040 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 789 610 219 66 1 chr17 26759611 26759755 -68512896 - B3A SINE B2 -62 154 1 4 789 504 235 176 31 chr17 26759761 26760016 -68512635 - L1MA6 LINE L1 0 6300 6009 4 789 229 329 97 61 chr17 26760803 26760968 -68511683 + MLT1C LTR MaLR 27 197 -308 4 789 243 293 0 0 chr17 26760996 26761054 -68511597 + MLT1C LTR MaLR 410 467 0 4 789 255 61 0 0 chr17 26761720 26761753 -68510898 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 789 245 182 18 0 chr17 26761755 26761810 -68510841 + (CATA)n Simple_repeat Simple_repeat 2 57 0 4 789 1170 75 0 0 chr17 26763671 26763818 -68508833 - B1_Mus2 SINE Alu 0 147 1 4 789 447 322 85 19 chr17 26763864 26764076 -68508575 + MER2 DNA MER2_type 11 236 -109 4 789 5327 95 44 17 chr17 26764628 26765401 -68507250 + L1_Mus4 LINE L1 5839 6632 -4 4 789 224 351 46 50 chr17 26765733 26765930 -68506721 - MIR SINE MIR -7 261 56 4 789 184 328 16 0 chr17 26767283 26767347 -68505304 + MER5A DNA MER1_type 36 100 -89 4 789 326 257 85 101 chr17 26767486 26767515 -68505136 + Charlie4a DNA MER1_type 72 98 -410 4 789 1219 42 176 0 chr17 26767515 26767680 -68504971 - B2_Mm2 SINE B2 0 195 2 4 789 326 257 85 101 chr17 26767680 26767849 -68504802 + Charlie4a DNA MER1_type 99 267 -241 4 789 226 211 24 18 chr17 26769431 26769508 -68503143 - MIR SINE MIR -43 165 91 4 789 188 333 64 14 chr17 26770737 26770877 -68501774 - L2 LINE L2 -560 2859 2713 4 789 260 311 46 33 chr17 26771661 26771814 -68500837 - MLT1A1 LTR MaLR 0 408 254 4 789 212 326 0 0 chr17 26772379 26772428 -68500223 - L2b LINE L2 -6 3369 3321 4 789 332 147 0 13 chr17 26773473 26773549 -68499102 + (CA)n Simple_repeat Simple_repeat 1 75 0 4 789 663 174 0 17 chr17 26773561 26773742 -68498909 + (CA)n Simple_repeat Simple_repeat 2 179 0 4 789 234 303 102 39 chr17 26774844 26774971 -68497680 - L2b LINE L2 0 3375 3241 4 789 1193 50 0 0 chr17 26776683 26776822 -68495829 + B1_Mus1 SINE Alu 1 139 -9 4 789 195 129 0 0 chr17 26776843 26776874 -68495777 + (A)n Simple_repeat Simple_repeat 1 31 0 4 789 250 263 42 10 chr17 26777014 26777110 -68495541 - MLT1A LTR MaLR -213 161 63 4 789 187 306 197 42 chr17 26777998 26778237 -68494414 + L2c LINE L2 3094 3369 -18 4 789 596 189 119 52 chr17 26778950 26779084 -68493567 - B1_Mur2 SINE Alu -2 147 5 4 789 277 348 101 65 chr17 26779749 26779918 -68492733 - MLT1K LTR MaLR -305 290 116 4 789 974 245 34 5 chr17 26780945 26781154 -68491497 + B3 SINE B2 1 215 -1 4 789 233 230 39 39 chr17 26782588 26782665 -68489986 + L2b LINE L2 3282 3358 -17 4 789 538 272 135 7 chr17 26782689 26782911 -68489740 - MIR SINE MIR -2 266 15 4 789 264 239 42 14 chr17 26783085 26783157 -68489494 + ID4 SINE ID 2 75 -8 4 789 513 297 87 7 chr17 26783210 26783359 -68489292 + B4 SINE B4 81 241 -51 4 789 234 0 0 0 chr17 26783390 26783416 -68489235 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 789 219 351 61 26 chr17 26784020 26784134 -68488517 + MIRb SINE MIR 5 122 -146 4 789 256 238 62 70 chr17 26784554 26784664 -68487987 - MIR SINE MIR -88 188 76 4 789 566 323 6 19 chr17 26784980 26785138 -68487513 + RSINE1 SINE B4 8 163 -2 4 789 697 113 0 0 chr17 26785544 26785641 -68487010 + B1_Mus2 SINE Alu 36 132 -15 4 789 195 206 0 0 chr17 26786253 26786287 -68486364 - MIRb SINE MIR -12 256 223 4 789 215 109 0 14 chr17 26786255 26786296 -68486355 - L2b LINE L2 -18 3369 3329 4 789 264 274 38 88 chr17 26788119 26788199 -68484452 + MT2B LTR ERVL 166 241 -360 4 789 583 228 81 0 chr17 26788129 26788252 -68484399 + B1_Mus1 SINE Alu 16 148 0 4 789 23 0 0 0 chr17 26788252 26788275 -68484376 + AT_rich Low_complexity Low_complexity 1 23 0 4 789 247 321 25 0 chr17 26788337 26788418 -68484233 - MER47A DNA MER2_type 0 366 284 4 789 770 183 15 8 chr17 26788422 26788554 -68484097 + B1_Mm SINE Alu 2 134 -13 4 789 183 80 0 0 chr17 26788557 26788582 -68484069 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 789 28 29 0 0 chr17 26788594 26788629 -68484022 + AT_rich Low_complexity Low_complexity 1 35 0 4 789 279 198 45 45 chr17 26788654 26788786 -68483865 + (TATAA)n Simple_repeat Simple_repeat 5 136 0 4 789 542 248 38 57 chr17 26788812 26788970 -68483681 + B4A SINE B4 2 156 -136 4 789 274 273 15 0 chr17 26788981 26789047 -68483604 + RSINE1 SINE B4 91 157 -8 4 789 183 129 0 0 chr17 26789198 26789229 -68483422 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 789 1078 190 75 27 chr17 26789229 26789610 -68483041 - MT2A LTR ERVL -83 518 1 4 789 305 296 207 12 chr17 26789610 26789767 -68482884 - MER47A DNA MER2_type -155 211 23 4 789 3125 157 70 22 chr17 26789767 26790355 -68482296 - RLTR18 LTR ERVK 0 616 1 4 789 455 299 28 0 chr17 26790433 26790540 -68482111 + ID_B1 SINE B4 82 191 -33 4 789 344 339 0 50 chr17 26790540 26790554 -68482097 + PB1D10 SINE Alu 1 115 -2 4 789 1107 78 38 18 chr17 26790707 26790878 -68481773 + B2_Mm2 SINE B2 5 188 -28 4 789 1050 120 53 64 chr17 26790878 26791065 -68481586 + B2_Mm2 SINE B2 2 186 -9 4 789 858 188 81 22 chr17 26791065 26791078 -68481573 + B3 SINE B2 189 200 -16 4 789 360 278 128 64 chr17 26791630 26791818 -68480833 + MIRb SINE MIR 17 216 -52 4 789 204 83 56 0 chr17 26793423 26793459 -68479192 + (TTTTTG)n Simple_repeat Simple_repeat 5 42 0 4 789 321 276 65 52 chr17 26793975 26794128 -68478523 + ID_B1 SINE B4 69 223 -1 4 789 663 152 73 36 chr17 26793993 26794130 -68478521 + B1_Mur4 SINE Alu 9 150 0 4 789 650 171 0 0 chr17 26794137 26794242 -68478409 + PB1D9 SINE Alu 1 105 -15 4 789 213 108 0 0 chr17 26794246 26794283 -68478368 + (GGA)n Simple_repeat Simple_repeat 1 37 0 4 789 2340 138 64 43 chr17 26795033 26795473 -68477178 - RMER4A LTR ERVK 0 466 18 4 789 250 289 168 40 chr17 26795620 26795721 -68476930 + RSINE1 SINE B4 50 163 -2 4 789 32 26 0 0 chr17 26795721 26795760 -68476891 + AT_rich Low_complexity Low_complexity 1 39 0 4 789 306 254 3 5 chr17 26796034 26796117 -68476534 - MIRb SINE MIR -95 113 32 4 789 31 0 0 0 chr17 26796127 26796158 -68476493 + GC_rich Low_complexity Low_complexity 1 31 0 4 789 664 146 285 0 chr17 26796251 26796402 -68476249 - URR1B DNA MER1_type -31 194 1 4 789 208 297 31 0 chr17 26797076 26797140 -68475511 + L2c LINE L2 3322 3387 0 4 789 332 276 171 8 chr17 26797785 26797902 -68474749 - MIR SINE MIR -10 252 117 4 789 21 36 0 0 chr17 26798160 26798188 -68474463 + AT_rich Low_complexity Low_complexity 1 28 0 4 789 655 284 108 72 chr17 26798348 26798655 -68473996 + MER2 DNA MER2_type 1 318 -27 4 789 2035 152 79 19 chr17 26798671 26799087 -68473564 + RMER10A LTR ERVL 1 441 -1 4 789 305 308 28 18 chr17 26799738 26799847 -68472804 - PB1D10 SINE Alu -7 110 1 4 789 556 308 6 30 chr17 26800679 26800843 -68471808 + B3A SINE B2 15 174 -24 4 789 638 182 73 16 chr17 26800851 26800974 -68471677 + B1_Mm SINE Alu 16 145 -2 4 789 203 327 100 124 chr17 26801071 26801166 -68471485 + L2 LINE L2 1805 1905 -1514 4 789 480 244 154 0 chr17 26801166 26801289 -68471362 + B1_Mur3 SINE Alu 2 143 -6 4 789 203 327 100 124 chr17 26801289 26801434 -68471217 + L2 LINE L2 1906 2039 -1380 4 789 220 274 84 0 chr17 26801494 26801589 -68471062 + L2 LINE L2 2176 2278 -1141 4 789 291 316 112 0 chr17 26802260 26802358 -68470293 - ID_B1 SINE B4 -54 170 62 4 789 661 162 306 0 chr17 26802812 26802985 -68469666 + URR1A DNA MER1_type 1 226 0 4 789 341 250 150 0 chr17 26803662 26803762 -68468889 + PB1D9 SINE Alu 6 120 0 4 789 278 271 90 45 chr17 26803817 26803906 -68468745 - PB1D10 SINE Alu -3 114 22 4 789 223 294 109 84 chr17 26803836 26803955 -68468696 - ID_B1 SINE B4 -48 176 55 4 789 859 217 90 15 chr17 26804226 26804427 -68468224 - B3 SINE B2 0 216 1 4 789 517 237 113 14 chr17 26804526 26804667 -68467984 - MT2A LTR ERVL -10 523 369 4 789 2944 144 105 2 chr17 26804667 26805180 -68467471 - RMER4B LTR ERVK 0 585 20 4 789 1201 62 0 0 chr17 26805190 26805336 -68467315 + B1_Mus2 SINE Alu 1 146 -1 4 789 216 111 0 0 chr17 26805337 26805373 -68467278 + (A)n Simple_repeat Simple_repeat 1 36 0 4 789 9666 131 66 28 chr17 26805406 26806866 -68465785 - MurERV4-int LTR ERVK 0 5260 3745 4 789 1170 43 7 0 chr17 26806866 26807004 -68465647 - B1_Mus2 SINE Alu -8 139 1 4 789 9666 131 66 28 chr17 26807004 26807235 -68465416 - MurERV4-int LTR ERVK -1516 3744 3521 4 789 621 0 0 0 chr17 26807235 26807304 -68465347 + (TC)n Simple_repeat Simple_repeat 2 70 0 5 789 9666 131 66 28 chr17 26807304 26807370 -68465281 - MurERV4-int LTR ERVK -1740 3520 3436 4 789 721 252 63 108 chr17 26807395 26807806 -68464845 - RMER2 LTR ERV1 -28 539 5 5 789 301 148 18 18 chr17 26807811 26807866 -68464785 - MurERV4-int LTR ERVK -1811 3449 3395 4 789 5043 146 25 31 chr17 26807851 26808766 -68463885 - MurERV4-int LTR ERVK -4313 947 38 4 789 3458 138 17 50 chr17 26808791 26809367 -68463284 - RMER4B LTR ERVK 0 585 26 5 789 1140 82 7 0 chr17 26809367 26809513 -68463138 + B1_Mus2 SINE Alu 1 147 0 5 789 3458 138 17 50 chr17 26809513 26809539 -68463112 - RMER4B LTR ERVK -560 25 3 5 789 482 279 121 30 chr17 26809551 26809717 -68462934 - MT2A LTR ERVL -352 181 1 4 789 1053 213 54 72 chr17 26809880 26810220 -68462431 - ORR1C1 LTR MaLR -8 370 43 5 789 234 259 0 0 chr17 26810430 26810484 -68462167 + B3A SINE B2 1 54 -144 5 789 1091 222 0 14 chr17 26810723 26810933 -68461718 + B3 SINE B2 1 207 -9 5 789 772 188 26 65 chr17 26810948 26811102 -68461549 - B1_Mur3 SINE Alu 0 149 2 5 789 297 278 54 23 chr17 26811170 26811299 -68461352 + RMER15 LTR ERVL 30 162 -413 5 789 517 261 451 5 chr17 26811299 26811504 -68461147 + RMER15 LTR ERVL 279 575 0 5 789 809 213 7 0 chr17 26811667 26811808 -68460843 - B1_Mur4 SINE Alu -7 143 2 5 789 303 290 20 51 chr17 26811914 26812012 -68460639 - B1_Mur3 SINE Alu -54 95 1 5 789 198 0 0 0 chr17 26812404 26812426 -68460225 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 5 789 1061 75 0 0 chr17 26812426 26812560 -68460091 - B1_Mus2 SINE Alu -11 136 3 5 789 1586 57 0 0 chr17 26812572 26812764 -68459887 - B2_Mm1t SINE B2 -1 192 1 5 789 1075 88 7 0 chr17 26814494 26814630 -68458021 - B1_Mus2 SINE Alu -10 137 1 5 789 918 182 96 0 chr17 26814738 26814925 -68457726 - B3 SINE B2 -7 209 5 5 789 420 200 0 0 chr17 26815747 26815817 -68456834 - ID2 SINE ID -11 72 3 5 789 360 0 0 0 chr17 26816260 26816300 -68456351 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 5 789 242 308 37 99 chr17 26816326 26816488 -68456163 + RSINE1 SINE B4 8 159 -6 5 789 238 322 0 48 chr17 26816439 26816491 -68456160 + B3A SINE B2 134 183 -15 5 789 915 114 30 0 chr17 26816491 26816623 -68456028 - B1_Mus1 SINE Alu -12 136 1 5 789 1498 78 0 5 chr17 26816804 26816997 -68455654 - B2_Mm2 SINE B2 -3 192 1 5 789 384 250 48 0 chr17 26817276 26817360 -68455291 - PB1D10 SINE Alu -21 96 9 5 789 726 222 42 21 chr17 26817456 26817645 -68455006 + B3A SINE B2 1 193 -5 5 789 393 58 0 0 chr17 26817878 26817930 -68454721 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 5 789 203 277 90 30 chr17 26817930 26818064 -68454587 + L2a LINE L2 2934 3075 -351 5 789 817 246 48 24 chr17 26818335 26818543 -68454108 - B3 SINE B2 0 216 4 5 789 553 239 153 0 chr17 26819047 26819203 -68453448 - B3A SINE B2 0 216 38 5 789 350 284 0 0 chr17 26820047 26820128 -68452523 - B3 SINE B2 -107 109 29 5 789 195 69 0 0 chr17 26820142 26820171 -68452480 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 5 789 1146 43 0 14 chr17 26820171 26820311 -68452340 - B1_Mus2 SINE Alu -9 138 1 5 789 677 117 160 40 chr17 26820314 26820439 -68452212 - B1_Mur3 SINE Alu -9 140 1 5 789 23 92 0 0 chr17 26820614 26820679 -68451972 + AT_rich Low_complexity Low_complexity 1 65 0 5 789 227 184 19 58 chr17 26820687 26820739 -68451912 - ID_B1 SINE B4 -3 221 172 5 789 509 188 42 0 chr17 26820694 26820790 -68451861 - PB1D9 SINE Alu -10 110 11 5 789 955 269 87 34 chr17 26821312 26821687 -68450964 + MTE2b LTR MaLR 14 405 -14 5 789 1255 100 0 0 chr17 26821911 26822081 -68450570 - B2_Mm2 SINE B2 -24 171 2 5 789 507 247 11 22 chr17 26822418 26822542 -68450109 - B1_Mur2 SINE Alu -12 137 17 5 789 233 386 70 0 chr17 26822441 26822555 -68450096 - B4 SINE B4 -87 205 84 5 789 630 113 0 0 chr17 26823025 26823122 -68449529 + (GGGA)n Simple_repeat Simple_repeat 4 100 0 5 789 435 38 0 0 chr17 26823369 26823422 -68449229 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 789 459 236 0 0 chr17 26824311 26824421 -68448230 - PB1D10 SINE Alu -7 110 1 5 789 333 0 0 0 chr17 26824523 26824560 -68448091 + (TATG)n Simple_repeat Simple_repeat 2 38 0 5 789 375 139 29 0 chr17 26824604 26824680 -68447971 - B1_Mur1 SINE Alu -5 144 29 5 789 328 308 83 18 chr17 26824704 26824813 -68447838 - PB1D10 SINE Alu 0 117 2 5 789 23 0 0 0 chr17 26824921 26824944 -68447707 + AT_rich Low_complexity Low_complexity 1 23 0 5 789 243 0 0 0 chr17 26825001 26825028 -68447623 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 789 391 148 33 0 chr17 26825031 26825092 -68447559 - B3A SINE B2 -125 73 11 5 789 552 308 15 0 chr17 26825182 26825315 -68447336 - RSINE1 SINE B4 -29 136 2 5 789 684 279 91 0 chr17 26825893 26826112 -68446539 - MLT1E3 LTR MaLR -164 460 222 5 789 416 208 162 94 chr17 26826139 26826256 -68446395 - RSINE1 SINE B4 -40 125 1 5 789 291 279 0 0 chr17 26826274 26826342 -68446309 + ID4 SINE ID 6 73 -10 5 789 180 0 0 0 chr17 26826719 26826739 -68445912 + (GA)n Simple_repeat Simple_repeat 1 20 0 5 789 257 296 153 20 chr17 26827113 26827292 -68445359 - MIRb SINE MIR -67 201 15 5 789 279 0 0 0 chr17 26827633 26827664 -68444987 + (G)n Simple_repeat Simple_repeat 1 31 0 5 789 314 229 14 0 chr17 26827779 26827849 -68444802 + B1F SINE Alu 78 148 -1 5 789 849 141 52 0 chr17 26827856 26827991 -68444660 + B1_Mur3 SINE Alu 1 142 -7 5 789 243 224 147 15 chr17 26828027 26828095 -68444556 + ID4_ SINE ID 5 81 -2 5 789 180 176 0 0 chr17 26828568 26828602 -68444049 + T-rich Low_complexity Low_complexity 2 35 0 5 789 1267 27 0 13 chr17 26828603 26828752 -68443899 - B1_Mus2 SINE Alu 0 147 1 5 789 253 323 10 51 chr17 26828785 26828883 -68443768 + BC1_Mm scRNA scRNA 2 95 -57 5 789 305 250 0 14 chr17 26828935 26829004 -68443647 + PB1 SINE Alu 53 120 -7 5 789 182 282 56 14 chr17 26829245 26829317 -68443334 + MIR SINE MIR 64 138 -124 5 789 304 186 33 17 chr17 26829498 26829558 -68443093 + ID_B1 SINE B4 153 213 -11 5 789 1247 41 0 0 chr17 26829655 26829800 -68442851 - B1_Mm SINE Alu -1 146 2 5 789 719 218 21 0 chr17 26830283 26830425 -68442226 - B3A SINE B2 -53 145 1 5 789 216 97 0 0 chr17 26830712 26830743 -68441908 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 5 789 214 299 45 0 chr17 26831467 26831534 -68441117 + MIRm SINE MIR 207 276 0 5 789 37 23 0 0 chr17 26832549 26832593 -68440058 + AT_rich Low_complexity Low_complexity 1 44 0 5 789 331 257 72 0 chr17 26832907 26833000 -68439651 + PB1D10 SINE Alu 15 126 -23 5 789 298 255 206 9 chr17 26833000 26833014 -68439637 + ID_B1 SINE B4 96 223 -1 5 789 1144 43 142 30 chr17 26833138 26833307 -68439344 - B2_Mm1t SINE B2 -5 188 1 5 789 813 204 129 10 chr17 26833407 26833600 -68439051 - B3 SINE B2 0 216 1 5 789 185 94 31 0 chr17 26834386 26834418 -68438233 + (TTGG)n Simple_repeat Simple_repeat 1 33 0 5 789 844 131 93 14 chr17 26834441 26834580 -68438071 - B1_Mur4 SINE Alu 0 150 1 5 789 26 0 0 0 chr17 26834886 26834912 -68437739 + AT_rich Low_complexity Low_complexity 1 26 0 5 789 555 262 36 68 chr17 26834912 26835133 -68437518 + B3 SINE B2 3 216 0 5 789 1132 43 0 0 chr17 26835160 26835298 -68437353 + B1_Mus1 SINE Alu 3 140 -8 5 789 1024 174 35 10 chr17 26835883 26836080 -68436571 - B3 SINE B2 -13 203 2 5 789 223 309 35 26 chr17 26836750 26836863 -68435788 - L2c LINE L2 -2 3385 3272 5 789 332 222 37 0 chr17 26836939 26837020 -68435631 + PB1 SINE Alu 26 109 -18 5 789 236 138 203 17 chr17 26837434 26837493 -68435158 - B1F SINE Alu -32 117 48 5 789 262 96 132 19 chr17 26837666 26837719 -68434932 + ID SINE ID 4 62 -162 5 789 396 0 0 0 chr17 26837747 26837791 -68434860 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 789 35 24 0 0 chr17 26837853 26837895 -68434756 + AT_rich Low_complexity Low_complexity 1 42 0 5 789 356 293 56 63 chr17 26837928 26838070 -68434581 - RSINE1 SINE B4 -22 143 3 5 789 614 201 230 6 chr17 26838130 26838295 -68434356 - B3 SINE B2 -14 202 1 5 789 226 240 0 0 chr17 26839558 26839608 -68433043 - B1F2 SINE Alu -99 50 1 5 789 782 162 49 14 chr17 26840342 26840486 -68432165 + B1_Mur4 SINE Alu 1 149 -1 5 789 324 70 0 0 chr17 26840486 26840529 -68432122 + (TGAA)n Simple_repeat Simple_repeat 2 44 0 5 789 1199 198 133 9 chr17 26840666 26840988 -68431663 - ORR1D1 LTR MaLR -8 366 5 5 789 285 333 34 63 chr17 26841086 26841195 -68431456 + B3 SINE B2 1 104 -112 5 789 1218 28 0 7 chr17 26841195 26841341 -68431310 + B1_Mus2 SINE Alu 3 147 0 5 789 285 333 34 63 chr17 26841341 26841436 -68431215 + B3 SINE B2 105 198 -18 5 789 225 108 0 0 chr17 26841437 26841474 -68431177 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 789 961 219 34 0 chr17 26841501 26841706 -68430945 - B3 SINE B2 -3 213 2 5 789 277 324 104 9 chr17 26841742 26841848 -68430803 + ID_B1 SINE B4 99 214 -10 5 789 323 292 52 10 chr17 26841761 26841858 -68430793 + B1F SINE Alu 48 148 -1 5 789 1210 34 0 39 chr17 26842011 26842164 -68430487 - B1_Mm SINE Alu 0 147 1 5 789 394 112 9 19 chr17 26842213 26842294 -68430357 - B2_Mm2 SINE B2 -9 184 103 5 789 671 89 0 47 chr17 26842378 26842484 -68430167 - B2_Mm2 SINE B2 -93 102 2 5 789 240 226 145 0 chr17 26843215 26843277 -68429374 + ID2 SINE ID 2 72 -11 5 789 204 40 0 0 chr17 26843392 26843417 -68429234 + (TC)n Simple_repeat Simple_repeat 1 25 0 6 789 1203 41 0 7 chr17 26843455 26843603 -68429048 - B1_Mus2 SINE Alu 0 147 1 6 789 224 0 65 0 chr17 26843744 26843775 -68428876 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 6 789 231 313 0 35 chr17 26844511 26844597 -68428054 - MLT1A1 LTR MaLR -6 402 320 6 789 263 170 21 0 chr17 26845021 26845068 -68427583 + B3A SINE B2 3 50 -148 6 789 1104 76 21 0 chr17 26845083 26845228 -68427423 + B1_Mus1 SINE Alu 1 148 0 6 789 322 269 0 0 chr17 26845246 26845324 -68427327 + B3A SINE B2 54 131 -67 6 789 543 78 0 0 chr17 26845347 26845424 -68427227 + (CA)n Simple_repeat Simple_repeat 2 78 0 6 789 387 0 0 0 chr17 26845424 26845466 -68427185 + (TA)n Simple_repeat Simple_repeat 1 43 0 6 789 306 0 0 0 chr17 26845466 26845499 -68427152 + (GA)n Simple_repeat Simple_repeat 2 35 0 6 789 240 309 0 29 chr17 26845562 26845632 -68427019 - PB1D10 SINE Alu -40 77 10 6 789 372 289 97 0 chr17 26845852 26845966 -68426685 + PB1 SINE Alu 1 125 -2 6 789 225 94 0 0 chr17 26846990 26847022 -68425629 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 6 789 190 250 54 0 chr17 26847582 26847638 -68425013 - L3 LINE CR1 -24 4465 4407 6 789 329 268 35 9 chr17 26848532 26848645 -68424006 + PB1D10 SINE Alu 2 117 0 6 789 207 100 0 0 chr17 26848847 26848877 -68423774 + (TCTG)n Simple_repeat Simple_repeat 1 30 0 6 789 822 192 0 14 chr17 26848877 26849025 -68423626 - B1_Mur1 SINE Alu -1 148 3 6 789 219 298 0 0 chr17 26849050 26849107 -68423544 - PB1 SINE Alu -31 96 40 6 789 345 287 23 0 chr17 26850234 26850321 -68422330 + B1F2 SINE Alu 1 89 -60 6 789 301 232 19 0 chr17 26850414 26850490 -68422161 - MIRb SINE MIR -9 259 170 6 789 631 255 79 70 chr17 26850605 26850820 -68421831 - B4A SINE B4 -74 218 2 6 789 316 274 9 54 chr17 26851062 26851174 -68421477 - PB1D10 SINE Alu -2 115 9 6 789 1256 125 125 0 chr17 26851215 26851415 -68421236 + URR1B DNA MER1_type 1 225 0 6 789 244 339 0 43 chr17 26851481 26851598 -68421053 - PB1D7 SINE Alu -4 116 5 6 789 27 29 0 0 chr17 26852804 26852838 -68419813 + GC_rich Low_complexity Low_complexity 1 34 0 6 789 23 0 0 0 chr17 26852896 26852919 -68419732 + GC_rich Low_complexity Low_complexity 1 23 0 6 789 217 233 17 0 chr17 26852993 26853053 -68419598 + G-rich Low_complexity Low_complexity 1 61 0 6 789 213 227 15 29 chr17 26853425 26853493 -68419158 + (CGGGG)n Simple_repeat Simple_repeat 2 68 0 6 789 237 33 0 0 chr17 26853940 26853970 -68418681 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 6 789 47 28 0 14 chr17 26854601 26854641 -68418010 + AT_rich Low_complexity Low_complexity 1 40 0 6 789 723 207 0 26 chr17 26854641 26854795 -68417856 - B1_Mur4 SINE Alu 0 150 1 6 789 47 28 0 14 chr17 26854795 26854826 -68417825 + AT_rich Low_complexity Low_complexity 1 31 0 6 789 1323 97 16 0 chr17 26854975 26855160 -68417491 - B2_Mm2 SINE B2 -7 188 1 6 789 1197 48 14 0 chr17 26855190 26855337 -68417314 - B1_Mur4 SINE Alu -1 149 1 6 789 1222 42 135 24 chr17 26855365 26855535 -68417116 + B2_Mm1a SINE B2 2 190 -3 6 789 225 327 46 9 chr17 26855612 26855720 -68416931 - PB1D10 SINE Alu -3 114 3 6 789 568 226 0 2 chr17 26855979 26856107 -68416544 - B1_Mur2 SINE Alu -22 127 2 6 789 366 292 26 17 chr17 26856335 26856450 -68416201 - PB1D10 SINE Alu -1 116 1 6 789 1284 14 0 0 chr17 26856946 26857092 -68415559 - B1_Mm SINE Alu 0 147 2 6 789 445 281 36 15 chr17 26857127 26857264 -68415387 - ID_B1 SINE B4 0 224 85 6 789 198 0 0 0 chr17 26857301 26857323 -68415328 + (TTG)n Simple_repeat Simple_repeat 2 23 0 6 789 679 181 0 29 chr17 26857323 26857454 -68415197 - B1_Mur2 SINE Alu -15 134 7 6 789 501 295 72 26 chr17 26857549 26857702 -68414949 - RSINE1 SINE B4 0 165 6 6 789 341 336 44 0 chr17 26857975 26858088 -68414563 - B1F SINE Alu -31 118 1 6 789 346 269 11 11 chr17 26858158 26858252 -68414399 - PB1D9 SINE Alu -6 114 21 6 789 407 157 43 0 chr17 26858286 26858383 -68414268 - B1_Mus2 SINE Alu 0 147 9 6 789 823 234 38 33 chr17 26858614 26858826 -68413825 + B3 SINE B2 2 214 -2 6 789 325 284 119 0 chr17 26858898 26859007 -68413644 + RSINE1 SINE B4 3 124 -41 6 789 195 100 0 0 chr17 26859081 26859111 -68413540 + (TATG)n Simple_repeat Simple_repeat 4 33 0 6 789 334 284 9 56 chr17 26859233 26859341 -68413310 - RSINE1 SINE B4 -55 110 8 6 789 244 263 55 90 chr17 26859440 26859603 -68413048 - B4 SINE B4 -74 218 49 6 789 270 329 0 12 chr17 26859578 26859658 -68412993 - B1_Mus1 SINE Alu -68 80 2 6 789 217 288 38 76 chr17 26859593 26859672 -68412979 - B4A SINE B4 -143 149 74 6 789 429 20 0 0 chr17 26859873 26859923 -68412728 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 789 213 275 0 58 chr17 26860108 26860230 -68412421 + T-rich Low_complexity Low_complexity 18 131 0 6 789 595 261 58 13 chr17 26860230 26860385 -68412266 - RSINE1 SINE B4 0 165 4 6 789 213 275 0 58 chr17 26860385 26860401 -68412250 + T-rich Low_complexity Low_complexity 2 17 0 6 789 540 187 89 0 chr17 26860414 26860537 -68412114 - B1_Mur1 SINE Alu -7 142 9 6 789 600 231 23 0 chr17 26860552 26860682 -68411969 - B1F SINE Alu -7 142 10 6 789 1055 38 0 29 chr17 26860971 26861107 -68411544 - B1_Mus2 SINE Alu -14 133 2 6 789 453 263 86 14 chr17 26861587 26861726 -68410925 - B1F SINE Alu 0 149 1 6 789 808 244 40 25 chr17 26861726 26861804 -68410847 - ID SINE ID -137 87 7 6 789 1380 168 0 30 chr17 26862147 26862380 -68410271 - URR1A DNA MER1_type 0 226 1 6 789 328 236 33 33 chr17 26862717 26862809 -68409842 + PB1D10 SINE Alu 26 117 0 6 789 219 113 321 0 chr17 26862864 26862917 -68409734 + B1_Mur2 SINE Alu 79 148 -1 6 789 185 0 40 0 chr17 26862921 26862946 -68409705 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 6 789 295 164 66 0 chr17 26863017 26863078 -68409573 - PB1D7 SINE Alu 0 120 56 6 789 458 264 48 0 chr17 26863063 26863188 -68409463 - B3A SINE B2 -67 131 1 6 789 286 319 99 0 chr17 26863260 26863351 -68409300 - B3A SINE B2 -98 100 1 6 789 262 302 81 52 chr17 26863362 26863498 -68409153 - B1F SINE Alu -9 140 1 6 789 269 289 92 0 chr17 26864666 26864742 -68407909 + B1F2 SINE Alu 2 84 -65 6 789 650 131 71 71 chr17 26864768 26864908 -68407743 + B1_Mur1 SINE Alu 10 149 0 6 789 189 0 0 0 chr17 26865811 26865832 -68406819 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 6 789 816 218 40 110 chr17 26865849 26866036 -68406615 - B3 SINE B2 -5 211 40 6 789 613 155 113 30 chr17 26866036 26866169 -68406482 - B1_Mur4 SINE Alu -6 144 1 6 789 816 218 40 110 chr17 26866169 26866208 -68406443 - B3 SINE B2 -177 39 1 6 789 229 264 0 42 chr17 26867127 26867222 -68405429 + CT-rich Low_complexity Low_complexity 3 93 0 6 789 580 256 8 8 chr17 26867277 26867411 -68405240 - B1F2 SINE Alu -1 148 15 6 789 415 247 39 9 chr17 26867567 26867705 -68404946 + Lx7 LINE L1 5639 5786 -547 6 789 1337 83 22 11 chr17 26867961 26868144 -68404507 - B2_Mm2 SINE B2 -9 186 2 6 789 1284 237 173 67 chr17 26868310 26868325 -68404326 - L1MB4 LINE L1 -25 6155 6145 6 789 442 275 27 27 chr17 26868325 26868471 -68404180 - B1F SINE Alu -1 148 3 6 789 1284 237 173 67 chr17 26868471 26869069 -68403582 - L1MB4 LINE L1 -36 6144 5477 6 789 1152 61 0 33 chr17 26869082 26869234 -68403417 - B1_Mus2 SINE Alu 0 147 1 6 789 323 268 21 24 chr17 26869508 26869611 -68403040 - B1F SINE Alu -12 108 8 6 790 620 204 22 29 chr17 26870746 26870882 -68401769 - B1_Mur1 SINE Alu 0 149 15 6 790 483 291 55 28 chr17 26870875 26871020 -68401631 - RSINE1 SINE B4 -14 151 3 6 790 1384 90 5 5 chr17 26871158 26871348 -68401303 - B2_Mm1a SINE B2 -3 190 1 6 790 235 324 28 56 chr17 26871398 26871506 -68401145 - PB1D10 SINE Alu -7 110 6 6 790 648 70 0 0 chr17 26871513 26871599 -68401052 + (TTTTC)n Simple_repeat Simple_repeat 2 87 0 6 790 706 175 187 21 chr17 26872084 26872271 -68400380 - URR1B DNA MER1_type -5 220 3 6 790 265 299 131 22 chr17 26872652 26872789 -68399862 - MER5A DNA MER1_type -35 154 3 6 790 21 36 0 0 chr17 26873328 26873356 -68399295 + AT_rich Low_complexity Low_complexity 1 28 0 6 790 344 294 64 0 chr17 26873380 26873489 -68399162 - B1F1 SINE Alu -2 147 32 6 790 423 98 0 0 chr17 26874401 26874462 -68398189 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 790 298 346 19 9 chr17 26874467 26874575 -68398076 - PB1D10 SINE Alu 0 117 9 6 790 426 76 165 0 chr17 26874606 26874685 -68397966 - PB1D9 SINE Alu 0 120 29 6 790 528 267 0 36 chr17 26875496 26875636 -68397015 + RSINE1 SINE B4 3 137 -28 6 790 365 19 58 0 chr17 26875804 26875856 -68396795 + (TTTTG)n Simple_repeat Simple_repeat 1 55 0 6 790 1163 62 0 20 chr17 26875857 26876005 -68396646 - B1_Mm SINE Alu -1 146 2 6 790 741 43 0 0 chr17 26876230 26876323 -68396328 + (TTTC)n Simple_repeat Simple_repeat 3 95 0 6 790 512 0 0 0 chr17 26876323 26876385 -68396266 - B1_Mm SINE Alu -11 136 75 6 790 635 253 57 11 chr17 26877117 26877293 -68395358 - B3 SINE B2 -8 208 25 6 790 683 224 7 20 chr17 26877330 26877480 -68395171 - B1_Mur1 SINE Alu 0 149 2 7 790 590 299 24 24 chr17 26877514 26877682 -68394969 - B3A SINE B2 -30 168 1 7 790 372 43 0 0 chr17 26878059 26878105 -68394546 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 790 346 304 63 35 chr17 26878106 26878249 -68394402 - RSINE1 SINE B4 -14 151 5 7 790 831 175 28 14 chr17 26878357 26878502 -68394149 - B1_Mur1 SINE Alu -1 148 2 7 790 279 309 0 0 chr17 26879915 26880051 -68392600 + (ATG)n Simple_repeat Simple_repeat 2 137 0 7 790 21 0 0 0 chr17 26880168 26880189 -68392462 + AT_rich Low_complexity Low_complexity 1 21 0 7 790 667 243 7 0 chr17 26880579 26880715 -68391936 + B1F2 SINE Alu 11 147 -2 7 790 285 197 0 0 chr17 26881145 26881221 -68391430 + (TG)n Simple_repeat Simple_repeat 1 76 0 7 790 315 0 0 0 chr17 26881371 26881406 -68391245 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 7 790 1159 45 0 0 chr17 26881407 26881561 -68391090 - B2_Mm2 SINE B2 -41 154 1 7 790 552 231 272 9 chr17 26882124 26882469 -68390182 - L1MA9 LINE L1 -43 6269 5834 7 790 385 244 89 32 chr17 26882600 26882723 -68389928 - B1_Mur2 SINE Alu -6 143 14 7 790 31 0 0 0 chr17 26882742 26882773 -68389878 + AT_rich Low_complexity Low_complexity 1 31 0 7 790 856 243 6 11 chr17 26882775 26882954 -68389697 + B3 SINE B2 1 178 -38 7 790 549 254 35 0 chr17 26882978 26883092 -68389559 - B3A SINE B2 -43 155 38 7 790 1162 49 7 0 chr17 26883158 26883301 -68389350 - B1_Mus2 SINE Alu 0 147 4 7 790 1371 59 5 31 chr17 26883470 26883663 -68388988 - B2_Mm1a SINE B2 -4 189 2 7 790 280 305 31 21 chr17 26883681 26883778 -68388873 - B1F1 SINE Alu -46 103 6 7 790 708 271 49 4 chr17 26883780 26884006 -68388645 - L1MA9 LINE L1 -704 5608 5373 7 790 233 29 29 0 chr17 26884010 26884044 -68388607 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 790 1306 53 0 0 chr17 26884044 26884214 -68388437 - B2_Mm1t SINE B2 -23 170 1 7 790 634 269 112 7 chr17 26884215 26884500 -68388151 - L1MA9 LINE L1 -768 5375 5061 7 790 361 269 0 40 chr17 26884538 26884662 -68387989 + CT-rich Low_complexity Low_complexity 4 122 0 7 790 2936 43 72 11 chr17 26884723 26885098 -68387553 + MTB LTR MaLR 3 400 0 7 790 304 310 60 0 chr17 26885189 26885289 -68387362 - B1F1 SINE Alu 0 149 44 7 790 1184 55 7 0 chr17 26885396 26885542 -68387109 + B1_Mus1 SINE Alu 2 148 0 7 790 340 270 117 28 chr17 26885549 26885728 -68386923 - L1MA9 LINE L1 -3349 2791 2597 7 790 643 165 0 94 chr17 26885726 26885757 -68386894 - L1_Mur2 LINE L1 -3786 2091 2061 7 790 372 22 0 0 chr17 26885757 26885802 -68386849 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 790 1171 68 0 7 chr17 26885802 26885950 -68386701 - B1_Mus1 SINE Alu -1 147 1 7 790 643 165 0 94 chr17 26885950 26886098 -68386553 - L1_Mur2 LINE L1 -3817 2060 1929 7 790 393 164 0 28 chr17 26886109 26886205 -68386446 + Lx2B LINE L1 6803 6900 -100 7 790 444 263 129 31 chr17 26886215 26886439 -68386212 - L1MA9 LINE L1 -3563 2577 2332 7 790 281 263 28 10 chr17 26886489 26886588 -68386063 - PB1D10 SINE Alu -40 109 7 7 790 275 299 13 13 chr17 26886663 26886741 -68385910 - ID4 SINE ID -3 80 3 7 790 378 0 0 0 chr17 26886774 26886816 -68385835 + (TC)n Simple_repeat Simple_repeat 1 42 0 7 790 333 0 0 0 chr17 26886816 26886852 -68385799 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 790 1018 123 35 0 chr17 26886907 26887078 -68385573 + URR1A DNA MER1_type 37 213 -13 7 790 248 272 24 24 chr17 26887278 26887361 -68385290 - L1_Mur3 LINE L1 -3891 1989 1907 7 790 802 37 9 18 chr17 26887394 26887505 -68385146 + (TTCTC)n Simple_repeat Simple_repeat 2 111 0 7 790 207 0 0 0 chr17 26887511 26887534 -68385117 + (TCC)n Simple_repeat Simple_repeat 1 23 0 7 790 255 246 119 70 chr17 26887534 26887761 -68384890 - L1_Rod LINE L1 -6445 727 490 7 790 232 204 20 0 chr17 26888103 26888152 -68384499 + GA-rich Low_complexity Low_complexity 4 53 0 7 790 5217 11 0 0 chr17 26888554 26889163 -68383488 - L1Md_T LINE L1 0 6582 6009 7 790 463 252 8 25 chr17 26890848 26890966 -68381685 - ID_B1 SINE B4 -5 219 104 7 790 733 153 38 0 chr17 26891340 26891471 -68381180 - B1_Mus2 SINE Alu 0 147 12 7 790 452 268 41 55 chr17 26891342 26891488 -68381163 - B4 SINE B4 -69 223 80 7 790 724 273 19 0 chr17 26892529 26892690 -68379961 - RSINE1 SINE B4 0 165 2 7 790 216 0 0 0 chr17 26893092 26893116 -68379535 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 790 1108 69 0 14 chr17 26893116 26893252 -68379399 - B1_Mus1 SINE Alu -10 138 3 7 790 244 207 125 147 chr17 26893255 26893391 -68379260 - L1ME1 LINE L1 -7 6172 6040 7 790 377 289 73 7 chr17 26895003 26895139 -68377512 - ID_B1 SINE B4 -2 222 78 7 790 1010 122 0 7 chr17 26895817 26895965 -68376686 - B1_Mus1 SINE Alu 0 148 2 7 790 368 300 105 76 chr17 26897175 26897285 -68375366 - L1ME1 LINE L1 -38 6141 6021 7 790 617 194 102 22 chr17 26897285 26897422 -68375229 + B1_Mus1 SINE Alu 1 148 0 7 790 368 300 105 76 chr17 26897422 26897471 -68375180 - L1ME1 LINE L1 -159 6020 5973 7 790 793 218 111 11 chr17 26897471 26897661 -68374990 - B3 SINE B2 -3 213 5 7 790 368 300 105 76 chr17 26897661 26897976 -68374675 - L1ME1 LINE L1 -207 5972 5652 7 790 852 151 0 7 chr17 26898042 26898189 -68374462 + B1_Mur4 SINE Alu 3 148 -2 7 790 760 215 42 36 chr17 26898550 26898743 -68373908 + B3A SINE B2 2 195 -3 7 790 284 279 97 52 chr17 26898769 26898924 -68373727 + RSINE1 SINE B4 2 163 -2 7 790 252 111 0 0 chr17 26899336 26899381 -68373270 + (TTG)n Simple_repeat Simple_repeat 3 47 0 7 790 574 205 102 8 chr17 26899393 26899521 -68373130 - B1_Mur2 SINE Alu -9 140 1 7 790 204 222 0 0 chr17 26899857 26899893 -68372758 + polypyrimidine Low_complexity Low_complexity 4 39 0 7 790 443 319 26 0 chr17 26899917 26900033 -68372618 - B1_Mur1 SINE Alu -29 120 2 7 790 262 321 9 36 chr17 26900067 26900177 -68372474 - BC1_Mm scRNA scRNA -44 108 2 7 790 321 307 27 6 chr17 26901062 26901264 -68371387 - L1MC4 LINE L1 -4633 1678 1470 7 790 237 33 0 0 chr17 26902161 26902191 -68370460 + (TG)n Simple_repeat Simple_repeat 2 31 0 7 790 352 140 0 0 chr17 26902258 26902308 -68370343 + (GGA)n Simple_repeat Simple_repeat 2 51 0 7 790 585 111 18 18 chr17 26902308 26902418 -68370233 + (GAAA)n Simple_repeat Simple_repeat 2 111 0 7 790 489 219 61 0 chr17 26902518 26902632 -68370019 - RSINE1 SINE B4 -43 122 2 7 790 231 227 59 29 chr17 26902639 26902707 -68369944 - PB1D10 SINE Alu -7 110 41 7 790 490 236 153 28 chr17 26902750 26902894 -68369757 - RSINE1 SINE B4 0 165 4 7 790 639 165 222 18 chr17 26903347 26903514 -68369137 - B3 SINE B2 -6 210 10 7 790 24 53 0 0 chr17 26903571 26903609 -68369042 + AT_rich Low_complexity Low_complexity 1 38 0 7 790 541 125 0 46 chr17 26903656 26903765 -68368886 - L1Md_F2 LINE L1 -1 6581 6478 7 790 255 292 92 28 chr17 26904716 26904825 -68367826 + PB1D7 SINE Alu 3 118 -2 7 790 282 329 11 23 chr17 26904864 26904951 -68367700 - PB1 SINE Alu -41 86 1 7 790 276 53 0 0 chr17 26905195 26905233 -68367418 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 7 790 284 286 176 7 chr17 26905401 26905549 -68367102 - RMER15 LTR ERVL 0 575 403 7 790 321 292 138 0 chr17 26905585 26905607 -68367044 + B1_Mur4 SINE Alu 3 150 0 7 790 468 204 65 0 chr17 26905607 26905715 -68366936 + ID_B1 SINE B4 110 224 0 7 790 284 143 0 35 chr17 26905777 26905795 -68366856 + T-rich Low_complexity Low_complexity 67 84 0 7 790 1190 55 0 7 chr17 26905795 26905942 -68366709 - B1_Mus2 SINE Alu 0 147 2 7 790 284 143 0 35 chr17 26905942 26906010 -68366641 + T-rich Low_complexity Low_complexity 2 66 0 7 790 578 143 205 25 chr17 26906486 26906608 -68366043 - B1_Mur2 SINE Alu 0 149 6 7 790 202 255 0 19 chr17 26906917 26906969 -68365682 + (TATATG)n Simple_repeat Simple_repeat 6 56 0 7 790 405 231 39 62 chr17 26907025 26907154 -68365497 - B4A SINE B4 -113 179 54 7 790 520 210 40 0 chr17 26907386 26907486 -68365165 - PB1D10 SINE Alu -13 104 1 7 790 27 0 0 0 chr17 26907629 26907656 -68364995 + AT_rich Low_complexity Low_complexity 1 27 0 7 790 1232 47 0 0 chr17 26907656 26907804 -68364847 - B1_Mus1 SINE Alu 0 148 1 7 790 366 91 0 0 chr17 26908854 26908909 -68363742 + (TA)n Simple_repeat Simple_repeat 1 55 0 7 790 192 111 0 0 chr17 26909144 26909180 -68363471 + (A)n Simple_repeat Simple_repeat 1 36 0 7 790 24 0 0 0 chr17 26909785 26909809 -68362842 + AT_rich Low_complexity Low_complexity 1 24 0 7 790 1217 55 0 0 chr17 26914122 26914268 -68358383 + B1_Mm SINE Alu 2 147 0 7 790 351 214 356 46 chr17 26914326 26914542 -68358109 + B4 SINE B4 2 284 -8 7 790 672 142 16 55 chr17 26914800 26914927 -68357724 - B1_Mur3 SINE Alu -16 133 12 7 790 321 299 21 76 chr17 26914927 26914945 -68357706 - ID_B1 SINE B4 -16 208 72 7 790 245 338 12 12 chr17 26916495 26916576 -68356075 + L1MC LINE L1 5481 5561 -2321 7 790 463 240 19 0 chr17 26916584 26916688 -68355963 - PB1D9 SINE Alu -12 108 3 7 790 393 219 0 0 chr17 26916767 26916849 -68355802 + ID_B1 SINE B4 142 223 -1 7 790 250 232 14 68 chr17 26919120 26919194 -68353457 + ID4_ SINE ID 1 70 -13 7 790 334 205 92 4 chr17 26919249 26919352 -68353299 + PB1D10 SINE Alu 31 143 -7 7 790 234 324 83 9 chr17 26919579 26919688 -68352963 - MIR SINE MIR -128 134 18 7 790 351 0 0 0 chr17 26920027 26920066 -68352585 + (TC)n Simple_repeat Simple_repeat 2 40 0 7 790 315 0 0 0 chr17 26920066 26920100 -68352551 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 790 794 188 14 0 chr17 26922144 26922288 -68350363 - B1_Mur2 SINE Alu -1 148 3 8 790 330 24 0 0 chr17 26922880 26922899 -68349752 + (A)n Simple_repeat Simple_repeat 1 19 0 8 790 1183 61 0 0 chr17 26922899 26923046 -68349605 + B1_Mm SINE Alu 1 147 0 8 790 330 24 0 0 chr17 26923046 26923067 -68349584 + (A)n Simple_repeat Simple_repeat 1 21 0 8 790 262 346 10 0 chr17 26923411 26923515 -68349136 - L1MEd LINE L1 -5934 185 81 8 790 219 328 39 31 chr17 26923984 26924113 -68348538 - RSINE1 SINE B4 -35 130 1 8 790 599 251 85 40 chr17 26924125 26924324 -68348327 - ID_B1 SINE B4 -2 222 15 8 790 1145 66 0 0 chr17 26924691 26924828 -68347823 + B1_Mus2 SINE Alu 2 138 -9 8 790 486 0 0 0 chr17 26924828 26924882 -68347769 + (GGAA)n Simple_repeat Simple_repeat 3 56 0 8 790 591 15 0 0 chr17 26924884 26924952 -68347699 + (GAAAA)n Simple_repeat Simple_repeat 4 71 0 8 790 572 305 90 0 chr17 26925213 26925380 -68347271 - B3A SINE B2 -16 182 1 8 790 353 319 0 0 chr17 26925420 26925511 -68347140 + ID_B1 SINE B4 2 92 -132 8 790 337 136 152 0 chr17 26925741 26925807 -68346844 + B1_Mur2 SINE Alu 74 149 0 8 790 232 319 21 11 chr17 26925807 26925832 -68346819 + B4A SINE B4 163 254 -38 8 790 412 247 361 33 chr17 26926843 26927011 -68345640 - ID_B1 SINE B4 0 224 2 8 790 265 250 51 26 chr17 26927062 26927140 -68345511 - ID4 SINE ID -2 81 2 8 790 855 156 0 0 chr17 26927449 26927584 -68345067 + B1_Mur4 SINE Alu 1 135 -15 8 790 181 77 0 71 chr17 26927595 26927637 -68345014 + (GGGAGA)n Simple_repeat Simple_repeat 6 44 0 8 790 291 217 115 42 chr17 26927695 26927791 -68344860 + PB1D7 SINE Alu 18 120 0 8 790 428 283 0 0 chr17 26928574 26928680 -68343971 + B3A SINE B2 2 107 -91 8 790 288 0 0 0 chr17 26928710 26928742 -68343909 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 790 718 225 70 21 chr17 26929585 26929771 -68342880 + B3 SINE B2 9 203 -13 8 790 285 289 44 59 chr17 26929788 26929924 -68342727 + RSINE1 SINE B4 3 136 -29 8 790 234 0 0 0 chr17 26930678 26930704 -68341947 + (TG)n Simple_repeat Simple_repeat 1 26 0 8 790 567 336 51 28 chr17 26930762 26931016 -68341635 - Tigger7 DNA MER2_type -2220 271 12 8 790 623 159 46 0 chr17 26931038 26931478 -68341173 + (CA)n Simple_repeat Simple_repeat 1 460 0 8 790 317 281 203 0 chr17 26932243 26932396 -68340255 + MER2 DNA MER2_type 1 184 -161 8 790 363 281 184 0 chr17 26932521 26932635 -68340016 + B1_Mur1 SINE Alu 2 136 -13 8 790 378 0 0 0 chr17 26932753 26932795 -68339856 + (TC)n Simple_repeat Simple_repeat 2 43 0 8 790 743 143 304 0 chr17 26933147 26933308 -68339343 + B3 SINE B2 1 210 -6 8 790 708 150 97 8 chr17 26933322 26933456 -68339195 - B1_Mur3 SINE Alu -2 147 2 8 790 1381 81 0 31 chr17 26933482 26933673 -68338978 + B2_Mm2 SINE B2 2 186 -9 8 790 765 158 110 0 chr17 26934175 26934302 -68338349 - B1_Mus2 SINE Alu -6 141 1 8 790 533 308 89 28 chr17 26934959 26935286 -68337365 + MT2A LTR ERVL 1 347 -186 8 790 788 180 6 0 chr17 26935492 26935653 -68336998 + GA-rich Low_complexity Low_complexity 1 162 0 8 790 2207 72 19 10 chr17 26935654 26935964 -68336687 + ORR1A2 LTR MaLR 5 317 -10 8 790 693 228 169 83 chr17 26936140 26936526 -68336125 - MT2B LTR ERVL -56 545 5 8 790 539 231 7 13 chr17 26936848 26936997 -68335654 + L1M2 LINE L1 4537 4684 -1459 8 790 3456 20 8 0 chr17 26937232 26937625 -68335026 - MTA_Mm LTR MaLR 0 396 1 8 790 9437 26 6 1 chr17 26937625 26938718 -68333933 - MTA_Mm-int LTR MaLR 0 1098 1 8 790 3367 33 5 5 chr17 26938718 26939114 -68333537 - MTA_Mm LTR MaLR 0 396 1 8 790 459 0 0 0 chr17 26939208 26939259 -68333392 + (GA)n Simple_repeat Simple_repeat 1 51 0 8 790 919 196 86 20 chr17 26939283 26939481 -68333170 + B3 SINE B2 3 213 -3 8 790 830 78 0 0 chr17 26939557 26939672 -68332979 - B1_Mus1 SINE Alu 0 148 34 8 790 593 289 27 5 chr17 26939800 26939988 -68332663 - ID_B1 SINE B4 -30 194 3 8 790 436 260 79 0 chr17 26940010 26940137 -68332514 - ID_B1 SINE B4 0 224 88 8 790 254 206 40 40 chr17 26940157 26940233 -68332418 - MER2 DNA MER2_type -49 296 221 8 790 816 211 47 10 chr17 26940334 26940526 -68332125 - B3 SINE B2 -17 199 1 8 790 226 250 17 0 chr17 26940594 26940654 -68331997 + L1MB2 LINE L1 5892 5952 -219 8 790 900 199 64 13 chr17 26941168 26941402 -68331249 - RCHARR1 DNA MER1_type -207 767 522 8 790 497 279 7 60 chr17 26941428 26941577 -68331074 - B3A SINE B2 -21 195 55 8 790 1390 240 40 72 chr17 26941598 26942069 -68330582 - RCHARR1 DNA MER1_type -449 525 70 8 790 216 0 0 0 chr17 26942069 26942093 -68330558 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 790 956 48 0 0 chr17 26942099 26942224 -68330427 - B1_Mm SINE Alu -22 125 1 8 790 453 172 8 134 chr17 26942112 26942246 -68330405 - MT2B LTR ERVL -337 264 148 8 790 469 116 35 0 chr17 26942322 26942408 -68330243 + L1Md_F2 LINE L1 6493 6581 -1 8 790 1092 90 11 62 chr17 26942424 26942602 -68330049 + B2_Mm2 SINE B2 1 169 -26 8 790 396 0 0 0 chr17 26942685 26942729 -68329922 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 790 1682 158 165 12 chr17 26943338 26943671 -68328980 + ORR1C2 LTR MaLR 1 384 0 8 790 42 36 0 0 chr17 26943684 26943740 -68328911 + AT_rich Low_complexity Low_complexity 1 56 0 8 790 476 192 0 55 chr17 26943786 26943871 -68328780 - RMER1B Other Other -20 1046 962 8 790 3670 13 0 0 chr17 26943871 26944267 -68328384 + MTA_Mm LTR MaLR 1 396 0 8 790 9459 26 6 1 chr17 26944267 26945360 -68327291 + MTA_Mm-int LTR MaLR 1 1098 0 8 790 3553 18 5 0 chr17 26945360 26945754 -68326897 + MTA_Mm LTR MaLR 1 396 0 8 790 476 192 0 55 chr17 26945754 26945776 -68326875 - RMER1B Other Other -105 961 945 8 790 1095 167 59 0 chr17 26945782 26945968 -68326683 - RMER1B Other Other -293 773 577 8 790 1886 199 43 5 chr17 26945952 26946345 -68326306 - RMER1B Other Other -656 410 3 8 790 1504 228 96 14 chr17 26946454 26946810 -68325841 + MTD LTR MaLR 9 393 -26 8 790 267 249 123 39 chr17 26946811 26946919 -68325732 + B3A SINE B2 28 138 -60 8 790 273 57 0 0 chr17 26946921 26946956 -68325695 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 790 1188 62 7 0 chr17 26946981 26947126 -68325525 - B1_Mus1 SINE Alu -2 146 1 8 790 1512 50 0 0 chr17 26947126 26947305 -68325346 - B2_Mm1a SINE B2 -12 181 2 8 790 2075 237 119 15 chr17 26947321 26948023 -68324628 - Lx7 LINE L1 -12 7684 6765 8 790 2870 127 92 12 chr17 26948030 26948518 -68324133 - RLTR11A LTR ERVK 0 528 2 8 790 898 249 40 5 chr17 26949493 26949695 -68322956 - ID_B1 SINE B4 0 224 16 8 790 3164 149 30 27 chr17 26951247 26951806 -68320845 - RLTR31_Mm LTR ERVK 0 561 1 8 790 180 0 0 0 chr17 26951888 26951908 -68320743 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 8 790 252 0 0 0 chr17 26951908 26951936 -68320715 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 8 790 735 154 77 0 chr17 26951939 26952056 -68320595 - B1_Mur4 SINE Alu -13 137 12 8 790 385 289 74 52 chr17 26952056 26952074 -68320577 - ID_B1 SINE B4 -13 211 74 8 790 229 242 106 0 chr17 26952907 26952973 -68319678 + U6 snRNA snRNA 1 73 -34 8 790 326 281 0 0 chr17 26953150 26953232 -68319419 - Lx8 LINE L1 -363 7110 7029 8 790 276 30 0 0 chr17 26953376 26953409 -68319242 + (TAA)n Simple_repeat Simple_repeat 1 33 0 8 790 282 276 102 132 chr17 26953675 26953842 -68318809 + MLT1J LTR MaLR 203 364 -148 8 790 379 192 25 13 chr17 26953869 26953948 -68318703 + ID4 SINE ID 1 80 -3 8 790 389 298 74 30 chr17 26954200 26954335 -68318316 - MER102c DNA MER1_type -70 261 121 8 790 249 219 0 0 chr17 26954350 26954391 -68318260 - RSINE1 SINE B4 -32 133 93 8 790 532 147 11 43 chr17 26955649 26955834 -68316817 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 8 790 374 269 0 20 chr17 26955847 26955995 -68316656 + CT-rich Low_complexity Low_complexity 2 146 0 8 790 256 280 47 65 chr17 26956468 26956575 -68316076 - ID_B1 SINE B4 -38 186 82 8 790 473 205 35 82 chr17 26957038 26957208 -68315443 - RLTR43A LTR ERVK -2 362 201 8 790 2159 195 22 7 chr17 26957395 26957808 -68314843 - ETnERV2-int LTR ERVK -344 7062 6644 8 790 429 321 54 31 chr17 26957812 26958041 -68314610 - ETnERV2-int LTR ERVK -300 6619 6502 8 790 380 302 8 8 chr17 26958041 26958168 -68314483 - RodERV21-int LTR ERV1 -428 4563 4437 8 790 429 321 54 31 chr17 26958168 26958191 -68314460 - ETnERV2-int LTR ERVK -300 6501 6490 8 790 990 170 43 11 chr17 26958673 26958857 -68313794 - RMER16-int LTR ERVK -1426 3980 3791 8 790 2445 175 41 25 chr17 26958903 26959386 -68313265 - ETnERV2-int LTR ERVK -1613 5793 5295 8 790 1257 66 48 0 chr17 26959386 26959553 -68313098 - B2_Mm2 SINE B2 -19 176 2 8 790 2445 175 41 25 chr17 26959553 26959585 -68313066 - ETnERV2-int LTR ERVK -2112 5294 5270 8 790 843 264 20 39 chr17 26959585 26960026 -68312625 - ETnERV2-int LTR ERVK -2743 3424 3042 8 790 3498 217 75 89 chr17 26960048 26961041 -68311610 - ETnERV2-int LTR ERVK -2567 2839 1792 8 790 1084 52 7 0 chr17 26961041 26961177 -68311474 + B1_Mus1 SINE Alu 11 147 -1 8 790 3498 217 75 89 chr17 26961177 26961842 -68310809 - ETnERV2-int LTR ERVK -2567 1791 1089 8 790 1007 205 97 49 chr17 26961842 26962150 -68310501 - ETnERV2-int LTR ERVK -5469 668 346 8 790 182 282 39 78 chr17 26962161 26962238 -68310413 - L2 LINE L2 -602 2817 2744 8 790 459 185 0 0 chr17 26962238 26962319 -68310332 - ETnERV2-int LTR ERVK -5027 379 299 8 790 25 0 0 0 chr17 26962975 26963000 -68309651 + AT_rich Low_complexity Low_complexity 1 25 0 8 790 256 218 25 37 chr17 26963048 26963129 -68309522 - ETnERV2-int LTR ERVK -7948 269 190 8 790 299 216 168 40 chr17 26963425 26963462 -68309189 - RLTR43A LTR ERVK -2 362 321 8 790 207 0 0 0 chr17 26963462 26963485 -68309166 + (G)n Simple_repeat Simple_repeat 1 23 0 8 790 299 216 168 40 chr17 26963485 26963548 -68309103 - RLTR43A LTR ERVK -44 320 250 8 790 1596 37 16 0 chr17 26963550 26963738 -68308913 + B2_Mm1a SINE B2 1 191 -2 8 790 301 308 14 14 chr17 26964109 26964254 -68308397 - L1M3 LINE L1 -743 5397 5253 8 790 1431 45 79 0 chr17 26964270 26964429 -68308222 + B2_Mm1t SINE B2 2 160 -33 8 790 315 0 0 0 chr17 26964429 26964464 -68308187 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 8 790 1431 45 79 0 chr17 26964464 26964482 -68308169 + B2_Mm1t SINE B2 161 191 -2 8 790 747 179 104 0 chr17 26964494 26964628 -68308023 + B1_Mur2 SINE Alu 1 148 -1 8 790 866 177 14 0 chr17 26965642 26965783 -68306868 + B1_Mur1 SINE Alu 2 144 -5 8 790 228 322 63 105 chr17 26965784 26966069 -68306582 - ORR1E LTR MaLR -36 323 51 8 790 183 80 0 0 chr17 26966619 26966644 -68306007 + (TGGGGG)n Simple_repeat Simple_repeat 6 30 0 9 790 182 258 10 70 chr17 26966779 26966879 -68305772 - L2 LINE L2 -597 2822 2729 9 790 210 71 0 0 chr17 26966879 26966907 -68305744 + (GGA)n Simple_repeat Simple_repeat 3 30 0 9 790 292 344 70 52 chr17 26966963 26967135 -68305516 - B4 SINE B4 0 292 118 9 790 312 200 172 86 chr17 26967368 26967461 -68305190 + B4 SINE B4 1 101 -191 9 790 1914 226 88 34 chr17 26967459 26967958 -68304693 + RMER19C LTR ERVK 86 611 0 9 790 675 256 48 37 chr17 26967958 26968145 -68304506 + B4 SINE B4 96 284 -8 9 790 1139 48 0 62 chr17 26968243 26968851 -68303800 + (TCCA)n Simple_repeat Simple_repeat 1 570 0 9 790 841 162 7 39 chr17 26969054 26969208 -68303443 + B1_Mur2 SINE Alu 1 149 0 9 790 508 291 70 20 chr17 26969219 26969419 -68303232 - L2a LINE L2 -255 3171 2962 9 790 434 240 8 0 chr17 26969479 26969608 -68303043 + (CATATA)n Simple_repeat Simple_repeat 6 135 0 9 790 313 289 100 15 chr17 26969694 26969824 -68302827 - L1M5 LINE L1 -1059 5087 4947 9 790 362 272 211 13 chr17 26969921 26970148 -68302503 - L1M5 LINE L1 -1231 4915 4644 9 790 877 197 114 0 chr17 26970168 26970361 -68302290 - B3 SINE B2 0 216 2 9 790 625 194 44 16 chr17 26970634 26970801 -68301850 - B3 SINE B2 -19 176 1 9 790 198 322 37 68 chr17 26970977 26971167 -68301484 + MIRm SINE MIR 5 188 -88 9 790 369 0 0 0 chr17 26972554 26972595 -68300056 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 790 402 21 0 0 chr17 26972650 26972697 -68299954 + (CA)n Simple_repeat Simple_repeat 1 47 0 9 790 22 0 0 0 chr17 26972934 26972956 -68299695 + AT_rich Low_complexity Low_complexity 1 22 0 9 790 319 193 198 17 chr17 26973519 26973635 -68299016 + B1_Mus1 SINE Alu 3 139 -9 9 790 249 33 0 0 chr17 26973635 26973665 -68298986 + (CAAG)n Simple_repeat Simple_repeat 2 31 0 9 790 252 0 0 0 chr17 26973754 26973782 -68298869 + (CA)n Simple_repeat Simple_repeat 2 29 0 9 790 516 156 0 0 chr17 26974080 26974170 -68298481 + (CAG)n Simple_repeat Simple_repeat 2 91 0 9 790 359 234 45 27 chr17 26974195 26974305 -68298346 + RMER30 DNA MER1_type 15 126 -76 9 790 186 43 0 0 chr17 26975058 26975081 -68297570 + (CACCC)n Simple_repeat Simple_repeat 3 25 0 9 790 23 33 0 0 chr17 26976083 26976113 -68296538 + GC_rich Low_complexity Low_complexity 1 30 0 9 790 25 0 0 0 chr17 26976287 26976312 -68296339 + GC_rich Low_complexity Low_complexity 1 25 0 9 790 444 77 0 0 chr17 26977706 26977771 -68294880 + (TC)n Simple_repeat Simple_repeat 2 66 0 9 790 333 0 0 0 chr17 26980171 26980208 -68292443 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 9 790 210 105 0 0 chr17 26980902 26980940 -68291711 + (TG)n Simple_repeat Simple_repeat 2 39 0 9 790 216 167 42 0 chr17 26981938 26981986 -68290665 + (CAGAGA)n Simple_repeat Simple_repeat 3 52 0 9 790 528 273 88 6 chr17 26982063 26982391 -68290260 - L1MB5 LINE L1 -100 6078 5710 9 790 315 0 0 0 chr17 26982480 26982515 -68290136 + (CA)n Simple_repeat Simple_repeat 2 36 0 9 790 219 146 0 0 chr17 26983884 26983925 -68288726 + (TTTTTA)n Simple_repeat Simple_repeat 6 46 0 9 790 396 0 0 0 chr17 26984046 26984090 -68288561 + (TG)n Simple_repeat Simple_repeat 1 44 0 9 790 1014 107 0 0 chr17 26984178 26984328 -68288323 + (TCTA)n Simple_repeat Simple_repeat 4 153 0 9 790 393 262 63 12 chr17 26984371 26984486 -68288165 - PB1D7 SINE Alu 0 120 4 9 790 281 387 28 0 chr17 26984394 26984500 -68288151 - ID_B1 SINE B4 -51 173 65 9 790 251 28 28 0 chr17 26985548 26985584 -68287067 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 9 790 551 119 45 5 chr17 26985877 26986084 -68286567 + (TA)n Simple_repeat Simple_repeat 1 215 0 9 790 978 26 0 0 chr17 26988398 26988515 -68284136 + (TTTC)n Simple_repeat Simple_repeat 3 119 0 9 790 1126 73 0 0 chr17 26988516 26988652 -68283999 - B1_Mus1 SINE Alu -11 137 2 9 790 246 231 11 133 chr17 26989827 26989857 -68282794 - B1F2 SINE Alu -64 85 59 9 790 1410 45 0 0 chr17 26989857 26990035 -68282616 + (TC)n Simple_repeat Simple_repeat 1 178 0 9 790 246 231 11 133 chr17 26990035 26990094 -68282557 - B1F2 SINE Alu -91 58 7 9 790 246 42 20 40 chr17 26990585 26990635 -68282016 + (TTTTTG)n Simple_repeat Simple_repeat 2 50 0 9 790 301 273 99 0 chr17 26990666 26990787 -68281864 - L1M5 LINE L1 -472 5701 5569 9 790 437 226 36 45 chr17 26991295 26991406 -68281245 - B1_Mur1 SINE Alu 0 149 40 9 790 678 35 0 0 chr17 26991464 26991549 -68281102 + (TG)n Simple_repeat Simple_repeat 2 86 0 9 790 465 269 90 0 chr17 26991980 26992114 -68280537 - RSINE1 SINE B4 -4 161 16 9 790 730 136 120 8 chr17 26992337 26992470 -68280181 - B1_Mur3 SINE Alu -1 148 1 9 790 21 71 0 0 chr17 26992615 26992657 -68279994 + AT_rich Low_complexity Low_complexity 1 42 0 9 790 207 323 64 57 chr17 26993018 26993159 -68279492 + MIRb SINE MIR 19 160 -108 9 790 273 229 0 16 chr17 26993466 26993528 -68279123 + GA-rich Low_complexity Low_complexity 1 61 0 9 790 237 33 0 0 chr17 26993551 26993581 -68279070 + (GGAGA)n Simple_repeat Simple_repeat 1 30 0 9 790 327 266 38 94 chr17 26994003 26994215 -68278436 + L1MA7 LINE L1 6086 6285 -6 9 790 609 250 35 6 chr17 26995080 26995249 -68277402 + B4 SINE B4 119 292 0 9 790 636 185 0 0 chr17 26995258 26995415 -68277236 + (CA)n Simple_repeat Simple_repeat 2 158 0 9 790 324 254 8 56 chr17 26995425 26995550 -68277101 + HAL1-3A_ME LINE L1 1975 2093 -765 9 790 852 10 0 0 chr17 26995606 26995703 -68276948 + (TTTCC)n Simple_repeat Simple_repeat 3 99 0 9 790 827 174 35 0 chr17 26995720 26995864 -68276787 - B1_Mur4 SINE Alu 0 150 2 9 790 504 211 127 34 chr17 26995915 26996033 -68276618 - B1_Mur1 SINE Alu -20 129 1 9 790 753 189 243 0 chr17 26996063 26996232 -68276419 - B3 SINE B2 -6 210 1 9 790 909 166 192 6 chr17 26996297 26996479 -68276172 - B3 SINE B2 0 216 1 9 790 1147 265 114 85 chr17 26996479 26997152 -68275499 - Lx9 LINE L1 -3 7641 6949 9 790 1203 134 38 0 chr17 26997215 26997401 -68275250 - B2_Mm2 SINE B2 -1 194 2 9 790 635 37 12 0 chr17 26997442 26997524 -68275127 + (TCTA)n Simple_repeat Simple_repeat 3 85 0 9 790 906 60 0 0 chr17 26998263 26998380 -68274271 + (TC)n Simple_repeat Simple_repeat 1 117 0 9 790 199 303 30 0 chr17 26998728 26998794 -68273857 - L3 LINE CR1 0 4489 4422 9 790 847 108 17 0 chr17 26999296 26999416 -68273235 - B3 SINE B2 -94 122 1 9 790 2360 154 60 5 chr17 26999424 26999823 -68272828 - MTC LTR MaLR 0 421 1 9 790 733 282 132 30 chr17 27000077 27000373 -68272278 + MLT1F LTR MaLR 66 391 -157 1 790 429 20 0 0 chr17 27000408 27000458 -68272193 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 790 531 0 0 0 chr17 27000458 27000516 -68272135 + (CA)n Simple_repeat Simple_repeat 1 59 0 3 791 467 259 83 35 chr17 27000903 27001047 -68271604 + MLT1A1 LTR MaLR 11 161 -247 4 791 182 303 21 43 chr17 27001521 27001614 -68271037 - L2a LINE L2 -2 3424 3334 5 791 1347 54 0 0 chr17 27002589 27002755 -68269896 + B2_Mm2 SINE B2 3 168 -27 6 791 780 212 11 23 chr17 27003023 27003215 -68269436 - B3 SINE B2 -1 194 9 7 791 23 33 0 0 chr17 27003215 27003245 -68269406 + AT_rich Low_complexity Low_complexity 1 30 0 8 791 611 183 0 16 chr17 27003642 27003653 -68268998 - PB1D9 SINE Alu 0 120 112 9 791 362 57 0 19 chr17 27003653 27003707 -68268944 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 1 791 611 183 0 16 chr17 27003707 27003817 -68268834 - PB1D9 SINE Alu -9 111 2 9 791 1035 103 0 0 chr17 27004053 27004189 -68268462 - B1_Mus2 SINE Alu -11 136 1 1 791 184 91 0 43 chr17 27004340 27004386 -68268265 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1 791 231 352 34 0 chr17 27004571 27004659 -68267992 + MIRc SINE MIR 127 217 -51 1 791 522 295 0 21 chr17 27004845 27004987 -68267664 - B1F2 SINE Alu -10 139 1 1 791 744 94 0 0 chr17 27005240 27005346 -68267305 + (TC)n Simple_repeat Simple_repeat 2 107 0 1 791 955 169 175 0 chr17 27005370 27005553 -68267098 - B3 SINE B2 0 216 2 1 791 986 106 35 7 chr17 27006136 27006279 -68266372 - B1_Mus1 SINE Alu -1 147 1 1 791 279 0 0 0 chr17 27006296 27006327 -68266324 + (ATTG)n Simple_repeat Simple_repeat 3 33 0 1 791 356 142 0 22 chr17 27006335 27006401 -68266250 - B2_Mm2 SINE B2 -107 109 47 1 791 1255 98 17 0 chr17 27006472 27006646 -68266005 - B2_Mm1t SINE B2 -14 179 3 2 791 1231 74 6 6 chr17 27006653 27006830 -68265821 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 2 791 483 0 45 0 chr17 27006847 27006914 -68265737 + (TTTA)n Simple_repeat Simple_repeat 2 71 0 2 791 561 124 0 0 chr17 27007539 27007636 -68265015 + (TG)n Simple_repeat Simple_repeat 2 98 0 2 791 251 211 77 0 chr17 27007637 27007689 -68264962 - B3A SINE B2 -46 152 97 2 791 228 289 103 26 chr17 27007649 27007727 -68264924 + MER21B LTR ERV1 585 668 -195 2 791 753 196 42 0 chr17 27007765 27007908 -68264743 - B1_Mur2 SINE Alu 0 149 1 2 791 480 77 0 0 chr17 27007957 27008022 -68264629 + (CATA)n Simple_repeat Simple_repeat 2 66 0 2 791 1334 96 17 0 chr17 27008036 27008213 -68264438 - B2_Mm2 SINE B2 -14 181 2 2 791 46 84 0 14 chr17 27008224 27008253 -68264398 + AT_rich Low_complexity Low_complexity 1 28 0 2 791 1507 60 0 11 chr17 27008253 27008438 -68264213 + B2_Mm1t SINE B2 1 183 -10 3 791 46 84 0 14 chr17 27008438 27008553 -68264098 + AT_rich Low_complexity Low_complexity 1 115 0 3 791 375 276 19 27 chr17 27008553 27008673 -68263978 - PB1D10 SINE Alu -3 147 27 3 791 749 228 54 34 chr17 27008651 27008686 -68263965 - B3 SINE B2 -7 209 175 3 791 222 37 0 0 chr17 27008686 27008713 -68263938 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 791 749 228 54 34 chr17 27008713 27008881 -68263770 - B3 SINE B2 -42 174 2 3 791 21 0 0 0 chr17 27009011 27009032 -68263619 + AT_rich Low_complexity Low_complexity 1 21 0 3 791 652 47 0 0 chr17 27009087 27009172 -68263479 + B1_Mur4 SINE Alu 66 150 0 3 791 190 109 21 42 chr17 27009190 27009238 -68263413 + A-rich Low_complexity Low_complexity 4 50 0 3 791 240 35 0 0 chr17 27009264 27009293 -68263358 + (TATG)n Simple_repeat Simple_repeat 3 31 0 3 791 356 263 101 87 chr17 27009318 27009605 -68263046 - B4A SINE B4 0 292 2 3 791 501 259 87 96 chr17 27011037 27011243 -68261408 + B4A SINE B4 15 230 -62 4 791 363 44 0 0 chr17 27012701 27012746 -68259905 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 791 563 120 0 57 chr17 27013264 27013370 -68259281 + PB1D9 SINE Alu 21 120 0 4 791 296 291 13 0 chr17 27013424 27013503 -68259148 + ID4_ SINE ID 4 83 0 4 791 229 226 62 31 chr17 27013589 27013653 -68258998 - ID4 SINE ID -17 66 1 4 791 244 225 56 17 chr17 27013711 27013942 -68258709 - RMER17D LTR ERVK -409 480 241 4 791 253 306 94 0 chr17 27014517 27014602 -68258049 - RMER15-int LTR ERVL -463 4536 4444 4 791 354 284 0 0 chr17 27014725 27014806 -68257845 - RSINE1 SINE B4 -80 85 5 4 791 274 274 334 4 chr17 27014867 27015152 -68257499 + MTEb LTR MaLR 1 376 -3 4 791 204 40 0 0 chr17 27015380 27015405 -68257246 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 791 270 0 0 0 chr17 27015405 27015434 -68257217 + (TATG)n Simple_repeat Simple_repeat 2 31 0 5 791 394 236 80 18 chr17 27015492 27015508 -68257143 - PB1D9 SINE Alu -1 119 104 5 791 1040 188 9 84 chr17 27015508 27015559 -68257092 - B3 SINE B2 -3 213 164 5 791 258 32 0 0 chr17 27015559 27015590 -68257061 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 791 1040 188 9 84 chr17 27015590 27015764 -68256887 - B3 SINE B2 -53 163 5 5 791 432 174 86 3 chr17 27015764 27015859 -68256792 - B1_Mur3 SINE Alu -17 103 1 5 791 864 198 24 10 chr17 27016263 27016454 -68256197 + B3 SINE B2 27 216 0 5 791 949 271 73 16 chr17 27016759 27017141 -68255510 - L1MB7 LINE L1 -27 6157 5754 5 791 2315 118 145 12 chr17 27017690 27018103 -68254548 + RMER6A LTR ERVK 1 468 -288 5 791 842 265 105 0 chr17 27018105 27018324 -68254327 - MTEb LTR MaLR -109 270 29 5 791 1104 65 0 0 chr17 27018324 27018462 -68254189 + B1_Mus2 SINE Alu 10 147 0 5 791 643 304 50 36 chr17 27018505 27018727 -68253924 - MTEb-int LTR MaLR -21 1559 1335 5 791 312 91 0 0 chr17 27018934 27018978 -68253673 + (GGGA)n Simple_repeat Simple_repeat 1 44 0 5 791 292 348 66 92 chr17 27018999 27019271 -68253380 - ORR1E LTR MaLR -5 354 90 6 791 417 252 35 26 chr17 27020080 27020194 -68252457 - PB1D10 SINE Alu -2 115 1 6 791 237 293 0 0 chr17 27020909 27020967 -68251684 + CT-rich Low_complexity Low_complexity 2 59 0 6 791 673 193 104 0 chr17 27021211 27021346 -68251305 - B1_Mur4 SINE Alu 0 150 2 6 791 629 242 129 20 chr17 27021543 27021745 -68250906 - ID_B1 SINE B4 0 224 1 6 791 249 374 125 11 chr17 27022297 27022473 -68250178 - MIRb SINE MIR -48 220 25 6 791 204 276 26 13 chr17 27023602 27023679 -68248972 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 6 791 848 182 54 12 chr17 27024262 27024429 -68248222 + URR1B DNA MER1_type 1 174 -51 6 791 1186 35 7 20 chr17 27024462 27024610 -68248041 + B1_Mus2 SINE Alu 1 146 -1 6 791 199 320 40 0 chr17 27024689 27024764 -68247887 - MIRb SINE MIR -94 174 97 6 791 375 198 36 0 chr17 27025171 27025254 -68247397 - B3A SINE B2 -128 88 1 7 791 304 300 11 0 chr17 27025947 27026037 -68246614 - BC1_Mm scRNA scRNA -55 97 7 7 791 542 231 0 17 chr17 27026052 27026171 -68246480 - PB1D10 SINE Alu 0 117 1 7 791 857 168 0 0 chr17 27026573 27026704 -68245947 - B1_Mur4 SINE Alu -2 148 18 7 791 423 321 32 102 chr17 27026704 27026760 -68245891 - B4 SINE B4 -69 223 50 7 791 464 313 124 36 chr17 27026764 27027099 -68245552 + MLT1A0 LTR MaLR 1 408 0 7 791 218 330 50 0 chr17 27027264 27027364 -68245287 + MIR SINE MIR 67 171 -91 7 791 222 62 0 0 chr17 27028003 27028035 -68244616 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 7 791 1240 55 0 0 chr17 27028036 27028181 -68244470 - B1_Mus1 SINE Alu -1 147 3 7 791 414 0 0 0 chr17 27028380 27028426 -68244225 + (CAGT)n Simple_repeat Simple_repeat 4 49 0 7 791 535 294 68 16 chr17 27028428 27028618 -68244033 - B4A SINE B4 0 292 93 8 791 744 189 0 69 chr17 27028618 27028633 -68244018 - B1_Mur1 SINE Alu 0 149 136 8 791 198 0 0 0 chr17 27028633 27028655 -68243996 + (TTTTG)n Simple_repeat Simple_repeat 5 26 0 8 791 744 189 0 69 chr17 27028655 27028798 -68243853 - B1_Mur1 SINE Alu -14 135 2 8 791 181 269 19 0 chr17 27029042 27029094 -68243557 + MIR3 SINE MIR 11 63 -145 8 791 677 226 6 0 chr17 27029136 27029313 -68243338 + GA-rich Low_complexity Low_complexity 1 178 0 8 791 209 227 23 0 chr17 27030065 27030109 -68242542 + GA-rich Low_complexity Low_complexity 1 45 0 8 791 286 318 139 0 chr17 27030383 27030556 -68242095 - L1MB3 LINE L1 -9 6174 5978 8 791 258 250 43 14 chr17 27031329 27031398 -68241253 - ID4_ SINE ID -11 72 2 8 791 1857 161 64 6 chr17 27031845 27032188 -68240463 - ORR1D1 LTR MaLR -11 363 1 8 791 366 23 0 0 chr17 27033141 27033184 -68239467 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 791 252 392 27 58 chr17 27034422 27034717 -68237934 + ORR1D2 LTR MaLR 77 362 -8 9 791 338 330 110 28 chr17 27034799 27035017 -68237634 + MER2 DNA MER2_type 108 343 -2 9 791 432 278 27 14 chr17 27035188 27035334 -68237317 + L1MA5A LINE L1 5707 5854 -443 9 791 351 0 0 0 chr17 27035680 27035719 -68236932 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 791 779 264 24 38 chr17 27035897 27036106 -68236545 + B4A SINE B4 6 211 -81 9 791 279 79 0 0 chr17 27036144 27036182 -68236469 + (CA)n Simple_repeat Simple_repeat 2 39 0 9 791 278 276 126 0 chr17 27036464 27036551 -68236100 + MLT1A1 LTR MaLR 1 98 -310 9 791 216 0 0 0 chr17 27036558 27036582 -68236069 + (TTG)n Simple_repeat Simple_repeat 3 26 0 9 791 399 231 83 9 chr17 27036671 27036780 -68235871 + MLT1A1 LTR MaLR 292 408 0 9 791 582 15 0 0 chr17 27036827 27036894 -68235757 + (TG)n Simple_repeat Simple_repeat 1 67 0 9 791 1987 124 10 29 chr17 27037462 27037815 -68234836 + ORR1A2 LTR MaLR 1 337 -9 9 791 1277 231 52 7 chr17 27038905 27039214 -68233437 - Lx3C LINE L1 -4 6972 6650 1 791 319 299 23 30 chr17 27039276 27039313 -68233338 + L1MEg LINE L1 1842 1880 -4204 1 791 1102 57 21 0 chr17 27039313 27039453 -68233198 + B1_Mm SINE Alu 5 147 0 1 791 319 299 23 30 chr17 27039453 27039546 -68233105 + L1MEg LINE L1 1881 1970 -4114 1 791 213 39 0 0 chr17 27040040 27040066 -68232585 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 791 1028 85 50 0 chr17 27040083 27040224 -68232427 - B1_Mus1 SINE Alu 0 148 1 1 791 645 179 18 0 chr17 27040767 27040879 -68231772 - RLTR14 LTR ERV1 -26 356 243 1 791 1351 151 32 0 chr17 27040932 27041151 -68231500 - RLTR14 LTR ERV1 -150 232 7 1 791 188 213 96 96 chr17 27041450 27041554 -68231097 + L4 LINE RTE 1745 1848 -181 1 791 1285 176 4 12 chr17 27041652 27041894 -68230757 + RLTR42-int LTR ERVK 1104 1343 -4179 1 791 1191 85 0 0 chr17 27041895 27042048 -68230603 + B2_Mm2 SINE B2 2 154 -41 1 791 212 0 36 0 chr17 27042052 27042080 -68230571 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 1 791 298 169 13 101 chr17 27042093 27042172 -68230479 + B1_Mm SINE Alu 69 140 -7 1 791 337 241 49 57 chr17 27042328 27042451 -68230200 + RLTR42-int LTR ERVK 1486 1607 -3915 1 791 267 291 0 25 chr17 27042546 27042627 -68230024 - RLTR15 LTR ERVK -95 264 186 1 791 3285 53 179 2 chr17 27042805 27043240 -68229411 + RLTR1B LTR ERV1 1 512 0 1 791 55685 34 5 3 chr17 27043240 27045959 -68226692 + MMERGLN-int LTR ERV1 1 2717 -4839 1 791 3621 40 28 5 chr17 27045959 27046385 -68226266 + RLTR10C LTR ERVK 1 436 0 1 791 55685 34 5 3 chr17 27046385 27050400 -68222251 + MMERGLN-int LTR ERV1 2718 6743 -813 1 791 2347 104 15 9 chr17 27050401 27050749 -68221902 - ORR1A2-int LTR MaLR -770 1193 637 1 791 1178 74 0 0 chr17 27050767 27050915 -68221736 - B1_Mus1 SINE Alu 0 148 1 1 791 1859 115 11 106 chr17 27050916 27051133 -68221518 - ORR1A2-int LTR MaLR -1646 317 109 1 791 1153 83 7 0 chr17 27051133 27051278 -68221373 + B1_Mus2 SINE Alu 2 147 0 1 791 1859 115 11 106 chr17 27051278 27051290 -68221361 - ORR1A3-int LTR MaLR -1855 108 108 1 791 344 22 22 0 chr17 27051290 27051335 -68221316 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 1 791 1859 115 11 106 chr17 27051335 27051454 -68221197 - ORR1A2-int LTR MaLR -1855 108 1 1 791 2051 76 68 56 chr17 27051454 27051513 -68221138 - ORR1A2 LTR MaLR 0 327 286 1 791 1685 26 0 15 chr17 27051513 27051709 -68220942 - B2_Mm1a SINE B2 0 193 1 1 791 2051 76 68 56 chr17 27051709 27051971 -68220680 - ORR1A2 LTR MaLR -42 285 2 1 791 381 255 204 70 chr17 27051971 27052329 -68220322 + RLTR42-int LTR ERVK 2453 2858 -3279 1 791 558 67 0 0 chr17 27052907 27052982 -68219669 + (TATG)n Simple_repeat Simple_repeat 2 76 0 1 791 842 178 7 46 chr17 27052982 27053135 -68219516 - B1_Mur3 SINE Alu -2 147 1 1 791 551 188 6 8 chr17 27053180 27053299 -68219352 + B1_Mus2 SINE Alu 3 147 0 1 791 31 26 0 0 chr17 27053299 27053337 -68219314 + AT_rich Low_complexity Low_complexity 1 38 0 1 791 182 159 43 14 chr17 27053362 27053432 -68219219 + (TATATG)n Simple_repeat Simple_repeat 2 73 0 1 791 238 290 0 46 chr17 27053444 27053509 -68219142 - RSINE1 SINE B4 -39 126 65 1 791 405 0 0 0 chr17 27054384 27054429 -68218222 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 791 202 265 95 29 chr17 27055026 27055131 -68217520 - L2a LINE L2 -36 3390 3279 1 791 318 87 0 0 chr17 27055408 27055454 -68217197 + (A)n Simple_repeat Simple_repeat 1 46 0 1 791 984 63 0 0 chr17 27055593 27055719 -68216932 - B1_Mus2 SINE Alu -21 126 1 1 791 452 182 16 127 chr17 27055607 27055733 -68216918 - MT2B LTR ERVL -337 264 153 1 791 337 287 10 41 chr17 27055752 27055850 -68216801 - PB1D9 SINE Alu 0 120 26 1 791 3252 48 5 10 chr17 27056061 27056459 -68216192 + MTA_Mm LTR MaLR 1 396 0 1 791 233 163 47 0 chr17 27056526 27056569 -68216082 - ID_B1 SINE B4 -24 200 156 1 791 414 246 102 14 chr17 27056900 27057020 -68215631 - PB1 SINE Alu -4 123 7 1 791 227 320 28 93 chr17 27056930 27057037 -68215614 - MT2B2 LTR ERVL -333 251 152 1 791 760 158 29 36 chr17 27057093 27057231 -68215420 + B1_Mur3 SINE Alu 3 139 -10 1 791 1145 69 14 0 chr17 27057359 27057504 -68215147 - B1_Mus1 SINE Alu 0 148 2 1 791 900 142 28 0 chr17 27057536 27057677 -68214974 + B1_Mur3 SINE Alu 5 149 0 1 791 189 147 0 0 chr17 27057677 27057711 -68214940 + (A)n Simple_repeat Simple_repeat 1 34 0 1 791 1174 122 0 22 chr17 27058468 27058653 -68213998 - B2_Mm2 SINE B2 -14 181 1 1 791 1679 31 0 0 chr17 27058954 27059146 -68213505 + B2_Mm1a SINE B2 2 193 0 1 791 720 76 6 0 chr17 27059195 27059310 -68213341 - B1_Mm SINE Alu 0 120 1 1 791 389 245 0 105 chr17 27059212 27059326 -68213325 - MT2B LTR ERVL -348 253 152 1 791 406 281 109 23 chr17 27059329 27059504 -68213147 - B3A SINE B2 0 198 9 1 791 398 341 9 98 chr17 27060590 27060814 -68211837 - B4A SINE B4 -87 205 2 1 791 511 214 35 9 chr17 27062010 27062123 -68210528 - PB1D10 SINE Alu 0 117 2 1 791 276 299 52 59 chr17 27062126 27062279 -68210372 - ID_B1 SINE B4 -2 222 71 1 791 1552 27 66 0 chr17 27062876 27063059 -68209592 + B2_Mm2 SINE B2 1 195 0 1 791 1343 208 79 48 chr17 27063259 27063613 -68209038 - ORR1D1 LTR MaLR -9 365 1 1 791 1169 68 7 0 chr17 27063729 27063876 -68208775 - B1_Mus1 SINE Alu 0 148 1 1 791 264 260 17 119 chr17 27064613 27064731 -68207920 + MT2B LTR ERVL 152 257 -344 1 791 651 248 0 7 chr17 27064626 27064768 -68207883 + B1_Mur3 SINE Alu 1 141 -8 1 791 419 145 113 12 chr17 27064808 27064926 -68207725 + B3A SINE B2 11 155 -61 1 791 994 164 220 0 chr17 27065186 27065363 -68207288 - B3 SINE B2 0 216 1 1 791 4408 125 34 19 chr17 27065363 27066105 -68206546 - RMER6A LTR ERVK -2 754 2 1 791 240 273 38 25 chr17 27066545 27066624 -68206027 - ID4 SINE ID 0 83 4 1 791 637 269 91 0 chr17 27067088 27067274 -68205377 - B3 SINE B2 -10 206 4 1 791 26 30 0 0 chr17 27067277 27067310 -68205341 + AT_rich Low_complexity Low_complexity 1 33 0 1 791 865 197 0 26 chr17 27067310 27067461 -68205190 + B1_Mus2 SINE Alu 1 147 0 1 791 852 216 110 5 chr17 27067486 27067677 -68204974 - B3 SINE B2 -5 211 1 1 791 1523 83 0 0 chr17 27068005 27068198 -68204453 - B2_Mm1a SINE B2 0 193 1 1 791 1400 81 54 0 chr17 27068198 27068383 -68204268 - B2_Mm2 SINE B2 0 195 1 1 791 1381 189 191 14 chr17 27068496 27068851 -68203800 - MTD LTR MaLR 0 419 2 1 791 553 241 161 52 chr17 27069242 27069435 -68203216 - B3 SINE B2 -1 215 2 1 791 279 249 0 44 chr17 27075260 27075347 -68197304 + ID4_ SINE ID 12 95 -57 1 791 543 170 0 38 chr17 27078230 27078389 -68194262 + CT-rich Low_complexity Low_complexity 2 154 0 1 791 294 318 0 50 chr17 27078473 27078652 -68193999 + G-rich Low_complexity Low_complexity 4 173 0 1 791 276 350 0 8 chr17 27078913 27079034 -68193617 + GA-rich Low_complexity Low_complexity 4 123 0 1 791 369 0 0 0 chr17 27079873 27079914 -68192737 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 791 216 148 0 69 chr17 27080117 27080219 -68192432 + T-rich Low_complexity Low_complexity 1 94 0 1 791 239 291 0 23 chr17 27084217 27084305 -68188346 + CT-rich Low_complexity Low_complexity 4 89 0 1 791 540 0 0 0 chr17 27085065 27085125 -68187526 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 791 321 270 10 20 chr17 27085507 27085609 -68187042 + (CGG)n Simple_repeat Simple_repeat 2 102 0 1 791 29 70 0 0 chr17 27085651 27085708 -68186943 + GC_rich Low_complexity Low_complexity 1 57 0 1 791 21 71 0 0 chr17 27085820 27085862 -68186789 + GC_rich Low_complexity Low_complexity 1 42 0 1 791 195 100 0 0 chr17 27085891 27085921 -68186730 + (CGG)n Simple_repeat Simple_repeat 2 31 0 1 791 421 71 0 28 chr17 27087145 27087217 -68185434 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 791 33 0 0 0 chr17 27090813 27090846 -68181805 + GC_rich Low_complexity Low_complexity 1 33 0 1 791 195 42 0 0 chr17 27091042 27091066 -68181585 + (CAGCG)n Simple_repeat Simple_repeat 3 26 0 1 791 202 214 0 0 chr17 27091266 27091308 -68181343 - MIRm SINE MIR -3 273 232 1 791 492 62 0 0 chr17 27091423 27091487 -68181164 + (TTTTC)n Simple_repeat Simple_repeat 2 65 0 1 791 911 185 7 7 chr17 27091523 27091670 -68180981 - B1_Mur1 SINE Alu -1 148 2 1 791 1219 74 0 0 chr17 27092908 27093056 -68179595 - B1_Mus1 SINE Alu 0 148 1 1 791 555 210 186 0 chr17 27093170 27093294 -68179357 + B1_Mur4 SINE Alu 4 150 0 1 791 331 282 132 40 chr17 27093513 27093782 -68178869 - MLT1C LTR MaLR -2 388 77 1 791 199 353 19 92 chr17 27095704 27096075 -68176576 - L2 LINE L2 -663 2756 2413 1 791 341 321 3 31 chr17 27096203 27096435 -68176216 + CT-rich Low_complexity Low_complexity 1 225 0 1 791 195 100 0 0 chr17 27096505 27096535 -68176116 + (TC)n Simple_repeat Simple_repeat 1 30 0 1 791 246 62 0 0 chr17 27098911 27098943 -68173708 + (CCA)n Simple_repeat Simple_repeat 2 33 0 1 791 424 239 104 17 chr17 27100301 27100416 -68172235 + PB1 SINE Alu 1 125 -2 1 791 242 365 25 34 chr17 27100479 27100598 -68172053 + MER105 DNA DNA 20 137 -67 1 791 1231 48 0 14 chr17 27100606 27100754 -68171897 - B1_Mus2 SINE Alu 0 147 2 1 791 1317 92 38 0 chr17 27100758 27100942 -68171709 - B2_Mm1t SINE B2 0 193 3 1 791 1068 99 0 0 chr17 27102626 27102767 -68169884 - B1_Mus1 SINE Alu -4 144 4 1 791 594 179 51 0 chr17 27102774 27102891 -68169760 + B1_Mur4 SINE Alu 16 138 -12 1 791 272 27 0 26 chr17 27102891 27102929 -68169722 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 1 791 241 186 0 0 chr17 27102956 27102999 -68169652 + B4A SINE B4 103 145 -147 1 791 339 250 10 68 chr17 27102961 27103064 -68169587 + PB1D7 SINE Alu 23 119 -1 1 791 651 262 20 64 chr17 27103080 27103284 -68169367 + B3A SINE B2 2 196 -2 1 791 938 90 0 8 chr17 27103296 27103430 -68169221 + B1_Mus2 SINE Alu 9 141 -6 2 791 723 231 35 0 chr17 27103433 27103576 -68169075 + B1_Mur1 SINE Alu 1 148 -1 2 791 1043 162 108 0 chr17 27106473 27106677 -68165974 + URR1A DNA MER1_type 1 226 0 2 791 453 293 47 35 chr17 27106919 27107089 -68165562 - MamRep434 DNA TcMar -254 172 1 2 791 189 0 0 0 chr17 27109182 27109203 -68163448 + (T)n Simple_repeat Simple_repeat 1 21 0 2 791 207 100 0 0 chr17 27109294 27109324 -68163327 + (TTTTC)n Simple_repeat Simple_repeat 5 34 0 2 791 681 161 77 42 chr17 27109402 27109545 -68163106 - B1_Mur1 SINE Alu 0 149 2 2 791 904 152 18 12 chr17 27112456 27112623 -68160028 + B2_Mm2 SINE B2 1 168 -27 2 791 520 167 0 30 chr17 27112646 27112745 -68159906 + PB1D9 SINE Alu 12 107 -13 2 791 294 224 223 45 chr17 27112745 27112758 -68159893 + ID_B1 SINE B4 93 224 0 2 791 445 316 0 0 chr17 27113393 27113510 -68159141 - PB1D10 SINE Alu 0 117 1 2 791 351 232 11 34 chr17 27113661 27113750 -68158901 + B4A SINE B4 6 92 -200 2 791 394 179 0 0 chr17 27113776 27113843 -68158808 + RSINE1 SINE B4 31 97 -68 2 791 752 183 28 7 chr17 27114117 27114260 -68158391 - B1_Mus1 SINE Alu 0 148 3 2 791 238 314 14 0 chr17 27114307 27114377 -68158274 - ID4_ SINE ID -9 74 4 2 791 1131 200 40 309 chr17 27114419 27114556 -68158095 - RMER19C LTR ERVK -3 608 472 2 791 1129 54 0 13 chr17 27114556 27114705 -68157946 + B1_Mus1 SINE Alu 2 148 0 2 791 1131 200 40 309 chr17 27114705 27115399 -68157252 - RMER19C LTR ERVK -140 471 1 2 791 227 191 21 0 chr17 27115404 27115451 -68157200 + BC1_Mm scRNA scRNA 2 49 -103 2 791 1925 194 50 20 chr17 27115653 27116091 -68156560 - RLTR11A LTR ERVK 0 528 78 2 791 589 184 0 60 chr17 27116186 27116319 -68156332 - B1_Mur3 SINE Alu -8 141 17 2 791 378 235 90 15 chr17 27116205 27116339 -68156312 - B4A SINE B4 -68 224 81 2 791 963 197 49 0 chr17 27116468 27116671 -68155980 + B3 SINE B2 1 213 -3 2 791 799 193 7 0 chr17 27116685 27116830 -68155821 + B1_Mus1 SINE Alu 3 148 0 2 791 536 231 49 43 chr17 27117169 27117198 -68155453 - RSINE1 SINE B4 0 165 141 2 791 450 0 0 0 chr17 27117198 27117248 -68155403 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 791 536 231 49 43 chr17 27117248 27117381 -68155270 - RSINE1 SINE B4 -25 140 2 2 791 256 284 148 0 chr17 27117661 27117749 -68154902 - ID_B1 SINE B4 -15 209 109 2 791 674 268 198 53 chr17 27117786 27118109 -68154542 - MTEa LTR MaLR -9 370 1 2 791 500 293 68 85 chr17 27118114 27118454 -68154197 + L1MB3 LINE L1 5820 6153 -30 2 791 274 240 57 51 chr17 27118477 27118635 -68154016 + L1MC5 LINE L1 7179 7337 -624 2 791 374 264 128 0 chr17 27118782 27118907 -68153744 + B1_Mur1 SINE Alu 2 142 -7 2 791 583 236 86 77 chr17 27118930 27119017 -68153634 + ID_B1 SINE B4 3 144 -148 2 791 933 55 0 0 chr17 27119017 27119144 -68153507 + B1_Mus2 SINE Alu 21 147 0 2 791 583 236 86 77 chr17 27119144 27119216 -68153435 + ID_B1 SINE B4 145 266 -26 2 791 444 19 0 0 chr17 27119225 27119278 -68153373 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 791 1065 56 35 0 chr17 27119378 27119520 -68153131 - B1_Mus1 SINE Alu 0 148 2 2 791 477 0 0 0 chr17 27119538 27119591 -68153060 + (TTA)n Simple_repeat Simple_repeat 3 55 0 2 791 299 316 0 40 chr17 27119594 27119693 -68152958 - PB1D10 SINE Alu -11 106 12 2 791 25 31 0 0 chr17 27119826 27119858 -68152793 + AT_rich Low_complexity Low_complexity 1 32 0 2 791 3581 117 21 16 chr17 27120332 27120950 -68151701 - RMER6A LTR ERVK -4 752 132 2 791 303 294 30 157 chr17 27121050 27121248 -68151403 + ID_B1 SINE B4 4 176 -48 2 791 390 190 38 0 chr17 27121173 27121252 -68151399 + PB1D10 SINE Alu 18 99 -18 2 791 295 294 12 0 chr17 27121417 27121502 -68151149 + MLT1B LTR MaLR 230 315 -75 2 791 256 307 10 93 chr17 27121467 27121564 -68151087 + B4A SINE B4 51 139 -153 2 791 617 154 62 47 chr17 27121528 27121657 -68150994 + B1_Mur1 SINE Alu 19 149 0 2 791 270 211 0 0 chr17 27121657 27121670 -68150981 + A-rich Low_complexity Low_complexity 1 13 0 2 791 1257 20 0 0 chr17 27121670 27121818 -68150833 + B1_Mus1 SINE Alu 1 148 0 2 791 270 211 0 0 chr17 27121818 27121875 -68150776 + A-rich Low_complexity Low_complexity 14 70 0 2 791 216 0 0 0 chr17 27121876 27121900 -68150751 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2 791 1076 150 37 0 chr17 27122088 27122275 -68150376 + B2_Mm2 SINE B2 1 194 -1 2 791 337 130 0 0 chr17 27122297 27122351 -68150300 + ORR1B1 LTR MaLR 340 393 -1 2 791 1035 213 154 89 chr17 27122491 27122543 -68150108 + MTD LTR MaLR 9 56 -363 2 791 198 0 0 0 chr17 27122543 27122565 -68150086 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 791 1035 213 154 89 chr17 27122565 27122894 -68149757 + MTD LTR MaLR 57 414 -5 2 791 298 232 109 59 chr17 27123247 27123348 -68149303 + ID_B1 SINE B4 116 221 -3 2 791 276 256 0 47 chr17 27123712 27123798 -68148853 - B3A SINE B2 -114 84 3 2 791 468 91 0 0 chr17 27123807 27123873 -68148778 + (CTTCG)n Simple_repeat Simple_repeat 3 68 0 2 791 723 189 7 27 chr17 27123873 27124020 -68148631 - B1_Mur1 SINE Alu -5 144 1 2 791 458 204 0 11 chr17 27124050 27124144 -68148507 + PB1D9 SINE Alu 2 94 -26 2 791 4393 143 118 9 chr17 27124144 27124957 -68147694 + RMER19B LTR ERVK 1 902 0 2 791 460 172 8 8 chr17 27125228 27125345 -68147306 + (TG)n Simple_repeat Simple_repeat 1 117 0 2 791 233 309 8 0 chr17 27125381 27125504 -68147147 + (TATATG)n Simple_repeat Simple_repeat 6 129 0 2 791 228 364 0 0 chr17 27125514 27125591 -68147060 + (TG)n Simple_repeat Simple_repeat 2 78 0 2 791 277 200 12 70 chr17 27125600 27125686 -68146965 - B4A SINE B4 0 292 212 2 791 575 284 20 26 chr17 27125698 27125850 -68146801 - RSINE1 SINE B4 -6 159 9 2 791 853 249 5 5 chr17 27125843 27126037 -68146614 - B4A SINE B4 -55 237 44 2 791 337 172 0 30 chr17 27126061 27126127 -68146524 - PB1D10 SINE Alu -6 111 48 2 791 22 0 0 0 chr17 27126172 27126194 -68146457 + AT_rich Low_complexity Low_complexity 1 22 0 2 791 369 217 24 0 chr17 27126196 27126279 -68146372 - B3 SINE B2 -5 211 127 2 791 666 180 33 0 chr17 27126282 27126404 -68146247 - B1_Mur1 SINE Alu -5 144 19 2 791 760 234 23 86 chr17 27126473 27126693 -68145958 + B3 SINE B2 4 209 -7 2 791 847 97 8 0 chr17 27126951 27127075 -68145576 + B2_Mm1t SINE B2 2 126 -67 2 791 323 82 41 0 chr17 27127068 27127117 -68145534 - B2_Mm2 SINE B2 -143 52 2 2 791 231 273 255 14 chr17 27127294 27127439 -68145212 - ID_B1 SINE B4 -1 223 44 2 791 687 195 0 0 chr17 27127521 27127644 -68145007 - B1_Mur1 SINE Alu -13 136 14 2 791 870 108 14 0 chr17 27127937 27128076 -68144575 + B1_Mur4 SINE Alu 10 150 0 2 791 554 261 12 73 chr17 27128099 27128264 -68144387 + B3 SINE B2 58 212 -4 2 791 1566 42 0 0 chr17 27128273 27128466 -68144185 + B2_Mm1a SINE B2 1 193 0 2 791 216 0 0 0 chr17 27128484 27128508 -68144143 + (TC)n Simple_repeat Simple_repeat 2 25 0 2 791 623 244 21 88 chr17 27129241 27129434 -68143217 - B3A SINE B2 -4 194 15 2 791 551 162 0 71 chr17 27129440 27129553 -68143098 - B1F2 SINE Alu -2 147 43 2 791 1068 153 0 83 chr17 27129596 27129824 -68142827 - B3 SINE B2 -6 210 2 2 791 242 297 18 18 chr17 27129835 27129948 -68142703 - Lx5 LINE L1 -4 7046 6934 2 791 1220 86 5 51 chr17 27130082 27130279 -68142372 + B2_Mm1a SINE B2 2 189 -4 2 791 1117 50 0 0 chr17 27130283 27130424 -68142227 + B1_Mm SINE Alu 1 141 -6 2 791 264 59 0 0 chr17 27130424 27130458 -68142193 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 2 791 1236 69 0 0 chr17 27130471 27130631 -68142020 + B2_Mm1t SINE B2 1 160 -33 2 791 273 57 0 0 chr17 27130631 27130666 -68141985 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 791 569 238 35 14 chr17 27130683 27130828 -68141823 - B1_Mur1 SINE Alu -1 148 1 2 791 229 273 240 26 chr17 27130844 27130998 -68141653 - B3A SINE B2 -1 197 11 2 791 964 54 0 114 chr17 27131013 27131179 -68141472 + B1_Mus1 SINE Alu 1 147 -1 2 791 306 50 0 0 chr17 27131179 27131219 -68141432 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 791 967 257 70 22 chr17 27131327 27131773 -68140878 - RMER19A LTR ERVK 0 611 193 2 791 325 75 0 36 chr17 27131773 27131828 -68140823 - RMER19A LTR ERVK -683 54 2 2 98 1807 134 69 9 chr17 27131899 27132231 -68140420 - ORR1B1 LTR MaLR -1 393 42 2 792 320 345 62 17 chr17 27132424 27132601 -68140050 + L3 LINE CR1 3515 3699 -790 2 792 929 63 47 0 chr17 27132881 27133008 -68139643 + B1_Mus1 SINE Alu 2 134 -14 2 792 938 247 0 0 chr17 27133030 27133224 -68139427 - B3 SINE B2 -22 194 1 2 792 806 248 14 19 chr17 27133685 27133895 -68138756 - ID_B1 SINE B4 -1 223 15 2 792 366 23 0 0 chr17 27134403 27134446 -68138205 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 792 676 168 76 8 chr17 27134451 27134583 -68138068 + B1_Mur2 SINE Alu 7 147 -2 2 792 540 242 84 7 chr17 27134609 27134763 -68137888 + ID_B1 SINE B4 55 220 -4 2 792 290 296 8 107 chr17 27134771 27134789 -68137862 + PB1D10 SINE Alu 2 19 -98 2 792 3287 149 87 19 chr17 27134789 27135147 -68137504 + RLTR17 LTR ERVK 3 359 -333 2 792 1559 42 0 0 chr17 27135147 27135340 -68137311 - B2_Mm1a SINE B2 0 193 1 2 792 3287 149 87 19 chr17 27135340 27135625 -68137026 + RLTR17 LTR ERVK 360 690 -2 2 792 290 296 8 107 chr17 27135625 27135727 -68136924 + PB1D10 SINE Alu 20 110 -7 2 792 1204 48 0 0 chr17 27135736 27135883 -68136768 + B1_Mus1 SINE Alu 1 147 -1 3 792 371 56 19 0 chr17 27135884 27135938 -68136713 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 3 792 1221 75 0 6 chr17 27135948 27136121 -68136530 + B2_Mm2 SINE B2 2 173 -22 3 792 683 282 24 0 chr17 27136362 27136532 -68136119 - B3A SINE B2 -24 174 1 3 792 1151 117 1 5 chr17 27136542 27136731 -68135920 - B2_Mm2 SINE B2 -1 192 2 3 792 607 121 0 0 chr17 27136731 27136822 -68135829 - 4.5SRNA scRNA scRNA -3 91 1 3 792 591 269 0 7 chr17 27136848 27136990 -68135661 - RSINE1 SINE B4 0 165 25 3 792 277 256 219 16 chr17 27137750 27137873 -68134778 + B1F2 SINE Alu 2 149 0 3 792 671 146 30 23 chr17 27138418 27138551 -68134100 + B1_Mus2 SINE Alu 1 134 -13 3 792 582 280 48 5 chr17 27138972 27139159 -68133492 - B3A SINE B2 -3 195 1 3 792 258 270 144 62 chr17 27139352 27139498 -68133153 + MLT1D LTR MaLR 4 161 -344 3 792 1365 78 16 10 chr17 27139932 27140126 -68132525 + B2_Mm2 SINE B2 1 195 0 3 792 666 168 31 31 chr17 27140134 27140263 -68132388 + B1_Mur4 SINE Alu 9 137 -13 3 792 516 16 0 0 chr17 27140282 27140343 -68132308 + (GA)n Simple_repeat Simple_repeat 2 62 0 3 792 261 196 0 0 chr17 27140343 27140389 -68132262 + ID_B1 SINE B4 175 220 -4 3 792 322 344 65 16 chr17 27140599 27140785 -68131866 + MER58A DNA MER1_type 4 198 -26 3 792 450 207 0 0 chr17 27141285 27141367 -68131284 - ID_B1 SINE B4 -15 209 128 3 792 280 227 20 38 chr17 27141387 27141477 -68131174 - B4 SINE B4 -199 93 1 3 792 693 215 70 25 chr17 27141496 27141696 -68130955 - B3 SINE B2 -7 209 1 3 792 306 296 27 14 chr17 27142323 27142470 -68130181 + B1F1 SINE Alu 1 149 0 3 792 474 280 35 7 chr17 27143391 27143535 -68129116 + B1F1 SINE Alu 1 148 -1 3 792 227 338 70 0 chr17 27143566 27143637 -68129014 + ID4_ SINE ID 1 76 -7 3 792 1979 117 72 95 chr17 27143652 27144096 -68128555 - RMER4A LTR ERVK 0 466 33 3 792 538 215 216 24 chr17 27144171 27144338 -68128313 + B3 SINE B2 2 200 -16 3 792 243 0 0 0 chr17 27144338 27144365 -68128286 + (TAA)n Simple_repeat Simple_repeat 1 27 0 3 792 277 259 0 0 chr17 27144379 27144437 -68128214 + RSINE1 SINE B4 2 59 -106 3 792 540 157 129 24 chr17 27144447 27144571 -68128080 - B1_Mur1 SINE Alu -11 138 2 3 792 237 333 10 31 chr17 27144571 27144641 -68128010 + RSINE1 SINE B4 53 120 -45 3 792 366 23 0 0 chr17 27144647 27144690 -68127961 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 792 213 121 0 0 chr17 27144737 27144770 -68127881 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 792 1269 200 162 129 chr17 27144851 27145362 -68127289 + MT2A LTR ERVL 6 533 0 3 792 516 204 0 0 chr17 27145375 27145468 -68127183 + RMER20A LTR ERVK 11 103 -413 3 792 821 244 65 14 chr17 27145448 27145726 -68126925 + RMER20A LTR ERVK 218 509 -7 3 792 324 0 0 0 chr17 27145743 27145779 -68126872 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 792 351 0 0 0 chr17 27145779 27145817 -68126834 + (GA)n Simple_repeat Simple_repeat 1 39 0 3 792 631 197 7 99 chr17 27145817 27145969 -68126682 - B1_Mur3 SINE Alu -10 139 2 3 792 305 316 34 73 chr17 27146329 27146534 -68126117 - RLTR12B LTR ERVK -315 213 17 3 792 273 208 97 0 chr17 27146552 27146624 -68126027 - B2_Mm2 SINE B2 -116 79 1 3 792 1751 145 63 149 chr17 27146844 27147321 -68125330 + RMER4A LTR ERVK 1 436 -30 3 792 308 290 46 46 chr17 27147574 27147597 -68125054 - ID_B1 SINE B4 -2 222 93 3 792 548 224 0 0 chr17 27147597 27147704 -68124947 - B1F2 SINE Alu -31 118 12 3 792 230 391 11 0 chr17 27147814 27147906 -68124745 + ID_B1 SINE B4 7 99 -125 3 792 440 135 1 1 chr17 27147939 27148010 -68124641 + B1_Mus2 SINE Alu 1 71 -243 3 792 1083 38 0 0 chr17 27148010 27148142 -68124509 - B1_Mus2 SINE Alu -15 132 1 3 792 189 0 0 0 chr17 27148162 27148183 -68124468 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 3 792 316 267 99 8 chr17 27148488 27148609 -68124042 + B1F SINE Alu 2 133 -16 3 792 276 30 0 0 chr17 27148609 27148642 -68124009 + (GA)n Simple_repeat Simple_repeat 1 33 0 3 792 761 211 0 0 chr17 27148644 27148791 -68123860 + B1_Mur3 SINE Alu 3 149 0 3 792 257 262 118 78 chr17 27148888 27149041 -68123610 - MTEa LTR MaLR -16 363 205 3 792 498 17 0 0 chr17 27149307 27149366 -68123285 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 792 285 225 42 0 chr17 27149370 27149441 -68123210 - ID_B1 SINE B4 -14 210 137 3 792 656 233 60 27 chr17 27149598 27149783 -68122868 - B3A SINE B2 -2 196 6 3 792 292 227 63 24 chr17 27150189 27150293 -68122358 - PB1D10 SINE Alu -2 147 36 3 792 543 138 0 0 chr17 27150293 27150377 -68122274 + (TTCC)n Simple_repeat Simple_repeat 1 84 0 3 792 718 178 13 70 chr17 27150377 27150534 -68122117 - B1_Mur1 SINE Alu -1 148 1 3 792 543 138 0 0 chr17 27150534 27150543 -68122108 + (TTCC)n Simple_repeat Simple_repeat 4 12 0 3 792 367 231 245 0 chr17 27150556 27150703 -68121948 - B3A SINE B2 -15 183 1 3 792 210 118 0 0 chr17 27150766 27150800 -68121851 + (TCC)n Simple_repeat Simple_repeat 3 36 0 3 792 316 259 94 0 chr17 27150800 27150885 -68121766 - PB1D10 SINE Alu -5 112 20 3 792 731 218 93 67 chr17 27151073 27151362 -68121289 + ORR1D1 LTR MaLR 1 293 -81 3 792 451 298 0 26 chr17 27151491 27151608 -68121043 + PB1D7 SINE Alu 6 119 -1 3 792 297 167 0 0 chr17 27151771 27151825 -68120826 + (CGA)n Simple_repeat Simple_repeat 2 55 0 3 792 513 150 47 12 chr17 27151997 27152115 -68120536 + PB1D9 SINE Alu 23 137 -12 3 792 1112 68 0 7 chr17 27152115 27152263 -68120388 + B1_Mm SINE Alu 1 147 0 3 792 413 218 23 53 chr17 27152263 27152275 -68120376 + B1_Mur2 SINE Alu 138 149 0 3 792 1121 55 0 7 chr17 27152524 27152671 -68119980 - B1_Mus1 SINE Alu -2 146 1 3 792 561 236 98 0 chr17 27152701 27152824 -68119827 + B3A SINE B2 2 136 -62 3 792 288 0 0 0 chr17 27152830 27152862 -68119789 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 792 524 201 89 44 chr17 27152896 27153031 -68119620 + B1_Mur1 SINE Alu 1 141 -8 3 792 640 203 42 0 chr17 27153135 27153278 -68119373 - B1_Mur4 SINE Alu 0 150 2 3 792 339 233 55 0 chr17 27153466 27153539 -68119112 + ID_B1 SINE B4 110 186 -38 3 792 30 0 0 0 chr17 27153567 27153597 -68119054 + AT_rich Low_complexity Low_complexity 1 30 0 3 792 683 258 5 67 chr17 27154079 27154287 -68118364 - B3A SINE B2 0 198 4 3 792 329 164 0 32 chr17 27154504 27154567 -68118084 - ID_B1 SINE B4 -4 220 160 3 792 312 257 37 28 chr17 27154558 27154666 -68117985 + Charlie13a DNA Charlie 796 904 -610 3 792 180 0 0 0 chr17 27155550 27155570 -68117081 + (CCCCCA)n Simple_repeat Simple_repeat 2 21 0 3 792 399 21 0 0 chr17 27155632 27155680 -68116971 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 792 228 301 44 88 chr17 27155906 27155987 -68116664 + RSINE1 SINE B4 46 123 -42 3 792 369 0 0 0 chr17 27155987 27156028 -68116623 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 792 228 301 44 88 chr17 27156028 27156059 -68116592 + RSINE1 SINE B4 124 153 -12 3 792 1215 68 11 22 chr17 27156084 27156253 -68116398 + B2_Mm2 SINE B2 1 170 -25 3 792 1095 88 0 0 chr17 27156253 27156400 -68116251 + B1_Mm SINE Alu 1 147 0 3 792 344 44 0 0 chr17 27156570 27156615 -68116036 - B2_Mm2 SINE B2 -150 45 1 3 792 213 204 0 0 chr17 27158039 27158088 -68114563 + G-rich Low_complexity Low_complexity 1 49 0 3 792 206 283 0 0 chr17 27158529 27158582 -68114069 + G-rich Low_complexity Low_complexity 3 55 0 3 792 347 197 40 0 chr17 27158829 27158905 -68113746 + PB1D10 SINE Alu 11 89 -28 3 792 998 176 70 10 chr17 27158915 27159116 -68113535 + B3 SINE B2 1 213 -3 3 792 257 226 0 61 chr17 27160183 27160315 -68112336 + CT-rich Low_complexity Low_complexity 4 127 0 3 792 461 352 42 12 chr17 27160431 27160690 -68111961 + MT2A LTR ERVL 201 467 -66 3 792 882 230 306 12 chr17 27160767 27161176 -68111475 + RMER4B LTR ERVK 16 544 -41 3 792 303 279 30 34 chr17 27161149 27161280 -68111371 - RMER4B LTR ERVK -122 489 342 3 792 644 218 165 5 chr17 27161320 27161514 -68111137 - RMER4B LTR ERVK -339 246 22 3 792 920 134 68 34 chr17 27161514 27161691 -68110960 - B2_Mm2 SINE B2 -11 184 2 3 792 1163 48 7 0 chr17 27161745 27161892 -68110759 - B1_Mus1 SINE Alu 0 148 1 3 792 610 215 7 43 chr17 27162048 27162189 -68110462 - B1_Mur3 SINE Alu 0 149 14 3 792 262 211 115 80 chr17 27162213 27162326 -68110325 - PB1D10 SINE Alu 0 117 1 3 792 261 0 0 0 chr17 27162529 27162558 -68110093 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 3 792 389 188 12 0 chr17 27162572 27162657 -68109994 + (CA)n Simple_repeat Simple_repeat 2 87 0 3 792 444 174 236 9 chr17 27162874 27162984 -68109667 + B1_Mus1 SINE Alu 4 138 -10 3 792 465 103 0 0 chr17 27163292 27163360 -68109291 + (TG)n Simple_repeat Simple_repeat 2 69 0 3 792 390 228 3 13 chr17 27163530 27163652 -68108999 + B1_Mur1 SINE Alu 2 149 0 3 792 180 125 0 0 chr17 27163885 27163917 -68108734 + (TTA)n Simple_repeat Simple_repeat 1 32 0 3 792 554 273 45 0 chr17 27163989 27164143 -68108508 - RSINE1 SINE B4 -2 163 3 3 792 261 321 36 9 chr17 27164361 27164471 -68108180 - PB1D10 SINE Alu -1 116 4 3 792 369 197 14 0 chr17 27165821 27165892 -68106759 + PB1D10 SINE Alu 22 93 -24 4 792 282 116 0 0 chr17 27165902 27165945 -68106706 + (GGA)n Simple_repeat Simple_repeat 2 44 0 4 792 21 0 0 0 chr17 27166081 27166102 -68106549 + GC_rich Low_complexity Low_complexity 1 21 0 4 792 303 195 37 49 chr17 27167100 27167181 -68105470 + ID4_ SINE ID 1 80 -3 4 792 604 158 156 16 chr17 27167186 27167308 -68105343 + B1_Mur1 SINE Alu 10 148 -1 4 792 214 337 53 68 chr17 27167843 27168050 -68104601 + MIRb SINE MIR 41 244 -24 4 792 4150 112 73 73 chr17 27168135 27168582 -68104069 + RMER6A LTR ERVK 1 403 -353 4 792 252 0 0 0 chr17 27168582 27168610 -68104041 + (CAGA)n Simple_repeat Simple_repeat 2 29 0 4 792 4150 112 73 73 chr17 27168610 27168916 -68103735 + RMER6A LTR ERVK 404 753 -3 4 792 1466 73 0 30 chr17 27168916 27169076 -68103575 + B2_Mm1t SINE B2 1 160 -33 4 792 354 23 0 0 chr17 27169076 27169119 -68103532 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 4 792 1466 73 0 30 chr17 27169119 27169156 -68103495 + B2_Mm1t SINE B2 161 192 -1 4 792 267 244 103 11 chr17 27169157 27169172 -68103479 + MT2B LTR ERVL 144 166 -435 4 792 273 273 182 0 chr17 27169172 27169271 -68103380 + PB1D10 SINE Alu 1 117 0 4 792 281 293 13 0 chr17 27169326 27169401 -68103250 + RSINE1 SINE B4 23 98 -67 4 792 1095 60 8 0 chr17 27170231 27170365 -68102286 - B1_Mus2 SINE Alu -12 135 1 4 792 486 272 79 2 chr17 27170410 27170555 -68102096 + B3A SINE B2 60 214 -2 4 792 503 238 39 8 chr17 27170634 27170761 -68101890 - MIR SINE MIR -92 170 40 4 792 1208 29 0 0 chr17 27170957 27171094 -68101557 + B1_Mus1 SINE Alu 2 138 -10 4 792 225 0 0 0 chr17 27171094 27171119 -68101532 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 792 233 339 164 8 chr17 27171264 27171392 -68101259 - MER21B LTR ERV1 -210 653 506 4 792 252 227 63 51 chr17 27171407 27171486 -68101165 - PB1D10 SINE Alu 0 117 38 4 792 241 383 102 30 chr17 27171499 27171666 -68100985 - MER21B LTR ERV1 -660 203 25 4 792 364 189 0 78 chr17 27171895 27171908 -68100743 - PB1D10 SINE Alu 0 117 23 4 792 438 180 67 11 chr17 27171908 27171998 -68100653 - ID_B1 SINE B4 -26 198 104 4 792 240 59 0 0 chr17 27172574 27172608 -68100043 + (CACCC)n Simple_repeat Simple_repeat 3 36 0 4 792 338 0 0 23 chr17 27173454 27173497 -68099154 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 4 792 844 241 31 27 chr17 27173746 27173968 -68098683 - MTD LTR MaLR -1 418 196 4 792 382 274 12 121 chr17 27173962 27173993 -68098658 - B2_Mm2 SINE B2 -1 194 169 4 792 288 0 0 0 chr17 27173993 27174025 -68098626 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 792 516 274 12 120 chr17 27174025 27174160 -68098491 - B3A SINE B2 -25 173 46 4 792 491 294 89 11 chr17 27174163 27174342 -68098309 - MTD LTR MaLR -209 210 18 4 792 1540 52 11 0 chr17 27174367 27174558 -68098093 + B2_Mm1t SINE B2 1 193 0 4 792 226 232 18 0 chr17 27174973 27175029 -68097622 - B1F2 SINE Alu -90 59 3 4 792 239 0 32 0 chr17 27175699 27175730 -68096921 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 792 21 36 0 0 chr17 27175756 27175784 -68096867 + GC_rich Low_complexity Low_complexity 1 28 0 4 792 192 40 0 0 chr17 27176680 27176705 -68095946 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 4 792 559 228 156 12 chr17 27176741 27176914 -68095737 + ID_B1 SINE B4 27 224 0 4 792 255 154 56 84 chr17 27177076 27177147 -68095504 + PB1 SINE Alu 48 116 -11 4 792 198 91 0 0 chr17 27178019 27178052 -68094599 + (G)n Simple_repeat Simple_repeat 1 33 0 4 792 230 284 50 40 chr17 27178321 27178420 -68094231 + ID_B1 SINE B4 107 206 -18 4 792 301 296 156 58 chr17 27178653 27178932 -68093719 + L2a LINE L2 2828 3141 -285 4 792 1179 62 0 7 chr17 27179047 27179194 -68093457 - B1_Mus2 SINE Alu -1 146 1 4 792 26 0 0 0 chr17 27179197 27179223 -68093428 + AT_rich Low_complexity Low_complexity 1 26 0 4 792 484 241 21 35 chr17 27179277 27179419 -68093232 - B1F1 SINE Alu -9 140 1 4 792 212 309 111 20 chr17 27179453 27179552 -68093099 + L2a LINE L2 3284 3391 -35 4 792 577 152 20 0 chr17 27179601 27179700 -68092951 - B1_Mur1 SINE Alu -7 142 42 4 792 294 29 0 0 chr17 27179737 27179772 -68092879 + (TGGA)n Simple_repeat Simple_repeat 1 35 0 4 792 1119 62 13 33 chr17 27180608 27180759 -68091892 + B1_Mus1 SINE Alu 1 148 0 4 792 253 247 89 49 chr17 27180804 27180897 -68091754 + PB1D10 SINE Alu 1 99 -21 4 792 309 51 0 0 chr17 27180912 27180951 -68091700 + (GGGGA)n Simple_repeat Simple_repeat 3 41 0 4 792 371 278 41 83 chr17 27181007 27181152 -68091499 + ID_B1 SINE B4 16 154 -70 4 792 245 261 204 0 chr17 27181093 27181181 -68091470 + PB1D10 SINE Alu 9 114 -3 4 792 1402 73 6 0 chr17 27181466 27181643 -68091008 - B2_Mm1a SINE B2 -14 179 2 4 792 1726 16 0 0 chr17 27181651 27181842 -68090809 - B2_Mm1a SINE B2 -2 191 1 4 792 294 253 0 164 chr17 27182380 27182450 -68090201 - ID_B1 SINE B4 -6 218 165 4 792 1265 41 0 0 chr17 27182450 27182596 -68090055 - B1_Mus2 SINE Alu 0 147 2 4 792 294 253 0 164 chr17 27182596 27182629 -68090022 - ID_B1 SINE B4 -60 164 132 4 792 1176 158 38 0 chr17 27183013 27183222 -68089429 + URR1A DNA MER1_type 1 217 -9 4 792 1188 82 0 0 chr17 27183227 27183374 -68089277 + B1_Mm SINE Alu 1 147 0 4 792 183 288 0 55 chr17 27184148 27184203 -68088448 + L3 LINE CR1 4429 4480 -9 4 792 198 0 0 0 chr17 27184247 27184269 -68088382 + (CACCC)n Simple_repeat Simple_repeat 3 24 0 4 792 898 218 35 5 chr17 27184376 27184574 -68088077 - ID_B1 SINE B4 -18 206 3 4 792 342 174 221 58 chr17 27184618 27184722 -68087929 + ID_B1 SINE B4 78 198 -26 4 792 449 186 0 223 chr17 27184637 27184803 -68087848 + B1F2 SINE Alu 21 149 0 4 792 490 225 329 6 chr17 27184813 27184974 -68087677 - B3 SINE B2 -3 213 1 4 792 188 262 0 0 chr17 27185067 27185109 -68087542 + L2 LINE L2 3027 3068 -351 4 792 1265 67 11 0 chr17 27186358 27186536 -68086115 - B2_Mm2 SINE B2 0 195 16 4 792 416 310 14 7 chr17 27186608 27186754 -68085897 + (TG)n Simple_repeat Simple_repeat 2 148 0 4 792 443 220 11 34 chr17 27186757 27186936 -68085715 + (TATG)n Simple_repeat Simple_repeat 4 178 0 4 792 597 269 189 16 chr17 27186963 27187212 -68085439 - B4A SINE B4 0 292 1 4 792 225 204 0 0 chr17 27187222 27187266 -68085385 + T-rich Low_complexity Low_complexity 1 44 0 4 792 264 59 0 0 chr17 27187320 27187354 -68085297 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 792 382 280 0 45 chr17 27187365 27187477 -68085174 - RSINE1 SINE B4 -21 144 38 4 792 430 223 68 0 chr17 27187484 27187587 -68085064 - PB1D10 SINE Alu -5 112 3 4 792 270 0 0 0 chr17 27188884 27188914 -68083737 + (TGG)n Simple_repeat Simple_repeat 3 32 0 4 792 326 329 14 42 chr17 27189320 27189463 -68083188 + B1F1 SINE Alu 2 140 -9 4 792 181 0 33 33 chr17 27189471 27189501 -68083150 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 4 792 872 50 0 16 chr17 27189501 27189623 -68083028 - B1_Mus1 SINE Alu -2 146 27 4 792 1189 83 0 6 chr17 27189619 27189788 -68082863 - B2_Mm2 SINE B2 -26 169 2 4 792 407 279 39 0 chr17 27189793 27189897 -68082754 - PB1D9 SINE Alu -1 119 12 4 792 613 222 197 16 chr17 27189926 27190109 -68082542 - ID_B1 SINE B4 -4 220 5 4 792 1655 169 85 98 chr17 27190922 27191310 -68081341 - ORR1C2 LTR MaLR -1 383 1 4 792 183 42 0 0 chr17 27191596 27191620 -68081031 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 4 792 1018 143 0 0 chr17 27191620 27191767 -68080884 - B1_Mur4 SINE Alu -2 148 2 4 792 1144 227 132 75 chr17 27191830 27192156 -68080495 + MTD LTR MaLR 13 363 -56 4 792 1168 54 0 39 chr17 27192156 27192309 -68080342 - B1_Mm SINE Alu 0 147 1 4 792 1144 227 132 75 chr17 27192309 27192354 -68080297 + MTD LTR MaLR 364 405 -14 4 792 951 166 193 0 chr17 27192452 27192633 -68080018 - B3 SINE B2 0 216 1 4 792 1668 27 0 0 chr17 27192633 27192820 -68079831 - B2_Mm1a SINE B2 -6 187 1 4 792 1038 150 194 0 chr17 27192845 27193025 -68079626 - B3 SINE B2 0 216 2 4 792 372 265 148 22 chr17 27193034 27193169 -68079482 - ID_B1 SINE B4 -5 219 68 4 792 191 103 0 25 chr17 27195047 27195087 -68077564 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 4 792 222 37 0 0 chr17 27196195 27196222 -68076429 + (TC)n Simple_repeat Simple_repeat 1 27 0 4 792 871 244 10 0 chr17 27196223 27196420 -68076231 - B3 SINE B2 -17 199 1 4 792 423 245 0 106 chr17 27197088 27197211 -68075440 + ID_B1 SINE B4 102 211 -13 4 792 945 86 48 48 chr17 27198467 27198613 -68074038 - B1_Mm SINE Alu 0 147 2 4 792 957 144 0 27 chr17 27198643 27198793 -68073858 + B1_Mus2 SINE Alu 2 147 0 4 792 830 276 0 10 chr17 27198798 27198996 -68073655 - B3A SINE B2 -1 197 2 4 792 312 286 66 25 chr17 27199125 27199247 -68073404 + B1F1 SINE Alu 5 131 -18 4 792 253 301 41 0 chr17 27199255 27199328 -68073323 + ID4_ SINE ID 2 77 -6 4 792 261 368 35 0 chr17 27199511 27199625 -68073026 - PB1D7 SINE Alu 0 120 3 4 792 227 291 0 18 chr17 27199705 27199761 -68072890 - L2a LINE L2 -6 3420 3366 4 792 291 54 0 0 chr17 27199956 27199993 -68072658 + (CAA)n Simple_repeat Simple_repeat 2 38 0 4 792 756 231 119 15 chr17 27201626 27201828 -68070823 + ID_B1 SINE B4 1 223 -1 4 792 668 129 0 0 chr17 27201847 27201948 -68070703 + PB1D9 SINE Alu 15 115 -5 4 792 362 303 99 66 chr17 27204396 27204548 -68068103 + B3A SINE B2 6 162 -36 4 792 324 270 85 31 chr17 27204594 27204605 -68068046 - L1MEg LINE L1 -4132 1952 1942 4 792 876 57 187 0 chr17 27204605 27204728 -68067923 - B1_Mm SINE Alu 0 147 2 5 792 324 270 85 31 chr17 27204728 27204774 -68067877 - L1MEg LINE L1 -4143 1941 1896 4 792 1298 105 21 0 chr17 27204774 27204964 -68067687 - B2_Mm2 SINE B2 0 195 2 5 792 324 270 85 31 chr17 27204964 27205002 -68067649 - L1MEg LINE L1 -4189 1895 1850 4 792 1243 61 0 0 chr17 27205002 27205150 -68067501 - B1_Mus1 SINE Alu 0 148 1 5 792 324 270 85 31 chr17 27205150 27205182 -68067469 - L1MEg LINE L1 -4235 1849 1816 4 792 1457 63 11 11 chr17 27205184 27205375 -68067276 - B2_Mm1t SINE B2 -2 191 1 5 792 333 0 0 0 chr17 27205380 27205417 -68067234 + (TTCC)n Simple_repeat Simple_repeat 1 37 0 5 792 1107 134 0 0 chr17 27205417 27205596 -68067055 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 5 792 1030 140 0 0 chr17 27205598 27205741 -68066910 - B1_Mur4 SINE Alu -6 144 2 5 792 743 178 184 0 chr17 27205743 27205917 -68066734 - B3 SINE B2 -5 211 6 5 792 1139 95 0 7 chr17 27205952 27206101 -68066550 + B1_Mus1 SINE Alu 1 148 0 5 792 614 273 0 20 chr17 27207238 27207384 -68065267 - ID_B1 SINE B4 0 224 82 5 792 317 342 6 62 chr17 27207240 27207402 -68065249 + YREP_Mm Unknown Unknown 181 333 -1479 5 792 412 293 39 31 chr17 27207568 27207695 -68064956 - RSINE1 SINE B4 -30 135 8 5 792 902 101 0 0 chr17 27207736 27207865 -68064786 - B1_Mus2 SINE Alu -13 134 6 5 792 562 250 5 132 chr17 27207865 27207948 -68064703 - ID_B1 SINE B4 -13 211 27 5 792 912 235 78 0 chr17 27208095 27208299 -68064352 - ID_B1 SINE B4 -3 221 2 5 792 236 311 0 0 chr17 27208311 27208372 -68064279 - B1F SINE Alu -12 137 77 5 792 273 319 84 0 chr17 27208373 27208492 -68064159 - L2 LINE L2 -835 2584 2456 5 792 298 354 148 44 chr17 27208850 27209033 -68063618 - MER21B LTR ERV1 -99 764 563 5 792 405 0 0 0 chr17 27209172 27209217 -68063434 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 792 272 231 19 0 chr17 27209616 27209724 -68062927 + (TGGA)n Simple_repeat Simple_repeat 2 111 0 5 792 369 0 0 0 chr17 27209919 27209960 -68062691 + (TCTG)n Simple_repeat Simple_repeat 3 43 0 5 792 279 113 0 0 chr17 27210366 27210419 -68062232 + (TCTG)n Simple_repeat Simple_repeat 2 54 0 5 792 236 250 0 0 chr17 27210481 27210529 -68062122 + MIR3 SINE MIR 109 156 -52 5 792 819 29 0 0 chr17 27210531 27210635 -68062016 - B1_Mm SINE Alu -31 116 13 5 792 432 0 0 0 chr17 27210662 27210710 -68061941 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 792 346 288 113 14 chr17 27211590 27211731 -68060920 - RSINE1 SINE B4 -3 162 8 5 792 226 286 0 18 chr17 27211859 27211916 -68060735 + polypurine Low_complexity Low_complexity 2 57 0 5 792 254 400 7 33 chr17 27213112 27213262 -68059389 + ID_B1 SINE B4 5 150 -74 5 792 614 136 110 0 chr17 27213264 27213382 -68059269 + B1_Mur1 SINE Alu 18 148 -1 5 792 596 191 6 0 chr17 27213478 27213656 -68058995 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 792 183 242 0 0 chr17 27213706 27213768 -68058883 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 792 260 273 97 39 chr17 27214097 27214200 -68058451 - PB1D10 SINE Alu -5 112 4 5 792 975 267 51 15 chr17 27214456 27214730 -68057921 - B4A SINE B4 -1 291 8 5 792 211 250 0 0 chr17 27214751 27214791 -68057860 + ID4_ SINE ID 30 69 -14 5 792 691 196 22 0 chr17 27214850 27214988 -68057663 - B1_Mur1 SINE Alu -1 148 8 5 792 677 208 186 23 chr17 27214990 27215167 -68057484 - B3 SINE B2 -6 210 5 5 792 22 56 0 0 chr17 27215265 27215301 -68057350 + AT_rich Low_complexity Low_complexity 1 36 0 5 792 589 297 31 20 chr17 27215338 27215534 -68057117 + B3A SINE B2 1 198 0 5 792 246 32 0 0 chr17 27215572 27215603 -68057048 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 792 233 299 62 8 chr17 27215730 27215858 -68056793 - L1MB3 LINE L1 -214 5969 5835 5 792 214 48 45 45 chr17 27215890 27215934 -68056717 + (TCTCTG)n Simple_repeat Simple_repeat 3 46 0 5 792 392 265 87 14 chr17 27215970 27216108 -68056543 - B1F1 SINE Alu -1 148 1 5 792 368 160 0 26 chr17 27216117 27216194 -68056457 + C-rich Low_complexity Low_complexity 4 78 0 5 792 222 160 0 0 chr17 27216295 27216345 -68056306 + T-rich Low_complexity Low_complexity 1 50 0 5 792 357 328 63 37 chr17 27216348 27216370 -68056281 - B2_Mm2 SINE B2 0 195 171 5 792 1254 54 0 0 chr17 27216370 27216517 -68056134 - B1_Mus2 SINE Alu 0 147 1 5 792 584 242 13 62 chr17 27216517 27216684 -68055967 - B3 SINE B2 -25 170 1 5 792 343 282 45 46 chr17 27216718 27216895 -68055756 + B3A SINE B2 4 185 -10 5 792 229 253 12 48 chr17 27217118 27217135 -68055516 - ID4 SINE ID -2 81 2 5 792 250 246 0 15 chr17 27217135 27217201 -68055450 - ID SINE ID -158 66 2 5 792 596 221 64 93 chr17 27217680 27217856 -68054795 + B3A SINE B2 29 192 -6 5 792 704 148 6 34 chr17 27218126 27218301 -68054350 + CT-rich Low_complexity Low_complexity 1 170 0 5 792 519 156 14 36 chr17 27218322 27218462 -68054189 + CT-rich Low_complexity Low_complexity 1 137 0 5 792 340 288 144 47 chr17 27220059 27220089 -68052562 - B4A SINE B4 -56 236 200 5 792 542 15 15 0 chr17 27220089 27220156 -68052495 + (TG)n Simple_repeat Simple_repeat 2 69 0 5 792 340 288 144 47 chr17 27220156 27220340 -68052311 - B4A SINE B4 -93 199 2 5 792 724 211 0 7 chr17 27222155 27222424 -68050227 + (TG)n Simple_repeat Simple_repeat 1 267 0 5 792 462 210 0 0 chr17 27222437 27222556 -68050095 + (TG)n Simple_repeat Simple_repeat 1 119 0 5 792 299 301 73 8 chr17 27222606 27222730 -68049921 + MIR SINE MIR 7 138 -124 5 792 1052 200 53 14 chr17 27222741 27222949 -68049702 + B3 SINE B2 1 216 0 5 792 715 241 18 24 chr17 27223300 27223470 -68049181 + ID_B1 SINE B4 2 170 -54 5 792 231 227 76 0 chr17 27223519 27223585 -68049066 - tRNA-Ala-GCY_ tRNA tRNA -2 73 3 5 792 1115 64 19 0 chr17 27225418 27225574 -68047077 + B2_Mm2 SINE B2 37 195 0 5 792 195 129 0 0 chr17 27225590 27225621 -68047030 + (GGA)n Simple_repeat Simple_repeat 3 33 0 5 792 207 0 0 0 chr17 27226492 27226515 -68046136 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 792 598 260 136 30 chr17 27227217 27227415 -68045236 + ID_B1 SINE B4 5 223 -1 5 792 532 332 47 18 chr17 27227436 27227715 -68044936 + B4A SINE B4 2 288 -4 5 792 366 23 0 0 chr17 27227775 27227818 -68044833 + (TC)n Simple_repeat Simple_repeat 1 43 0 5 792 387 0 0 0 chr17 27227818 27227860 -68044791 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 792 742 280 62 12 chr17 27229382 27229799 -68042852 + ZP3AR Satellite Satellite 1 437 0 5 792 223 277 0 98 chr17 27229769 27229861 -68042790 + ID4 SINE ID 1 83 0 5 792 242 349 108 14 chr17 27229867 27230015 -68042636 - MIRb SINE MIR -21 247 86 5 792 245 277 179 55 chr17 27230458 27230475 -68042176 - MT2B2 LTR ERVL -248 336 175 5 792 641 145 118 24 chr17 27230475 27230602 -68042049 - B1_Mur1 SINE Alu 0 149 11 5 792 188 146 49 0 chr17 27230994 27231035 -68041616 + GA-rich Low_complexity Low_complexity 1 43 0 5 792 625 217 54 30 chr17 27231442 27231608 -68041043 + ID_B1 SINE B4 3 172 -52 5 792 980 134 14 0 chr17 27231970 27232112 -68040539 - B1_Mur2 SINE Alu -5 144 1 5 792 324 0 0 0 chr17 27232740 27232776 -68039875 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 792 444 185 0 0 chr17 27233088 27233196 -68039455 + (TG)n Simple_repeat Simple_repeat 1 108 0 5 792 945 197 35 84 chr17 27233346 27233573 -68039078 - B3 SINE B2 0 216 1 5 792 230 205 193 57 chr17 27233578 27233598 -68039053 - B1F SINE Alu -5 144 129 5 792 3058 27 51 8 chr17 27233598 27233970 -68038681 + L1Md_F2 LINE L1 6194 6581 -1 5 792 230 205 193 57 chr17 27233970 27234037 -68038614 - B1F SINE Alu -21 128 45 5 792 235 133 32 32 chr17 27234066 27234159 -68038492 + T-rich Low_complexity Low_complexity 3 95 0 5 792 1136 101 0 0 chr17 27234160 27234309 -68038342 - B1_Mur4 SINE Alu -1 149 1 5 792 553 246 0 17 chr17 27234309 27234428 -68038223 - PB1D7 SINE Alu -2 118 1 5 792 295 319 113 21 chr17 27234448 27234634 -68038017 - MIRb SINE MIR -32 236 34 5 792 188 67 0 32 chr17 27235192 27235223 -68037428 + (CGGGG)n Simple_repeat Simple_repeat 5 34 0 5 792 22 0 0 0 chr17 27237880 27237902 -68034749 + GC_rich Low_complexity Low_complexity 1 22 0 5 792 689 192 113 49 chr17 27239052 27239255 -68033396 + ID_B1 SINE B4 6 221 -3 5 792 468 355 44 24 chr17 27239276 27239527 -68033124 - Charlie4a DNA MER1_type -83 425 170 5 792 329 234 21 0 chr17 27240357 27240451 -68032200 + G-rich Low_complexity Low_complexity 1 96 0 5 792 274 318 0 28 chr17 27241692 27241800 -68030851 - ID4_ SINE ID -33 119 12 5 792 405 239 162 0 chr17 27241870 27241987 -68030664 + URR1B DNA MER1_type 1 136 -89 5 792 435 291 78 6 chr17 27242135 27242301 -68030350 - B3A SINE B2 -4 194 17 5 792 348 94 0 0 chr17 27242336 27242389 -68030262 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 792 305 272 0 98 chr17 27242679 27242842 -68029809 + C-rich Low_complexity Low_complexity 2 148 0 5 792 313 273 39 55 chr17 27242798 27242980 -68029671 + (CCCTG)n Simple_repeat Simple_repeat 2 180 0 5 792 257 354 0 58 chr17 27242907 27243096 -68029555 + C-rich Low_complexity Low_complexity 1 178 0 5 792 644 261 15 4 chr17 27243828 27243974 -68028677 + B3 SINE B2 74 216 0 5 792 756 243 180 28 chr17 27245037 27245287 -68027364 - MTEa LTR MaLR -28 351 64 5 792 424 208 28 113 chr17 27245650 27245667 -68026984 + MT2B LTR ERVL 153 205 -396 5 792 648 129 0 19 chr17 27245667 27245770 -68026881 + B1_Mur3 SINE Alu 3 103 -46 5 792 424 208 28 113 chr17 27245770 27245791 -68026860 + MT2B LTR ERVL 206 281 -320 5 792 1260 34 0 7 chr17 27245838 27245986 -68026665 - B1_Mm SINE Alu 0 147 1 5 792 2836 54 13 8 chr17 27245986 27246375 -68026276 - MTA_Mm LTR MaLR -5 391 1 5 792 345 147 267 0 chr17 27246520 27246595 -68026056 + B1_Mur4 SINE Alu 26 120 0 5 792 366 23 0 0 chr17 27246684 27246727 -68025924 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 792 342 230 214 19 chr17 27246893 27247035 -68025616 - B1_Mur1 SINE Alu 0 150 10 6 792 542 269 35 0 chr17 27247041 27247186 -68025465 - B3A SINE B2 -35 163 14 6 792 201 147 0 0 chr17 27248713 27248747 -68023904 + (CACCC)n Simple_repeat Simple_repeat 3 36 0 6 792 485 110 0 12 chr17 27249209 27249292 -68023359 + (TTCA)n Simple_repeat Simple_repeat 1 82 0 6 792 218 318 17 68 chr17 27249498 27249616 -68023035 + PB1D10 SINE Alu 1 112 -5 6 792 769 166 0 21 chr17 27249626 27249768 -68022883 + B1_Mur2 SINE Alu 11 149 0 6 792 283 279 76 15 chr17 27250014 27250145 -68022506 - L2 LINE L2 -537 2882 2744 6 792 180 0 0 0 chr17 27250160 27250180 -68022471 + (CCCCCA)n Simple_repeat Simple_repeat 1 20 0 6 792 281 293 24 0 chr17 27250286 27250368 -68022283 - ID_B1 SINE B4 -36 188 105 6 792 333 0 0 0 chr17 27259456 27259493 -68013158 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 792 215 354 62 0 chr17 27260250 27260346 -68012305 + MIRb SINE MIR 103 204 -64 6 792 391 280 15 39 chr17 27260432 27260447 -68012204 + ID SINE ID 70 81 -143 6 792 709 197 14 7 chr17 27260447 27260585 -68012066 + B1_Mus2 SINE Alu 1 139 -8 6 793 275 192 206 28 chr17 27263476 27263583 -68009068 + B1F1 SINE Alu 16 141 -8 6 793 225 265 44 0 chr17 27264214 27264282 -68008369 - B1_Mus2 SINE Alu -70 77 7 6 793 428 302 19 127 chr17 27264387 27264592 -68008059 + B4 SINE B4 83 265 -27 6 793 330 205 74 37 chr17 27265629 27265710 -68006941 + PB1D10 SINE Alu 10 93 -24 6 793 230 365 65 50 chr17 27267898 27268105 -68004546 + MIRb SINE MIR 48 254 -8 6 793 711 292 170 38 chr17 27269241 27269693 -68002958 + L2 LINE L2 2350 2861 -558 6 793 736 221 14 0 chr17 27269744 27269884 -68002767 + B3 SINE B2 48 189 -27 6 793 565 96 11 11 chr17 27271206 27271301 -68001350 + (CA)n Simple_repeat Simple_repeat 2 96 0 6 793 308 233 68 0 chr17 27271529 27271602 -68001049 - B3A SINE B2 -119 79 2 6 793 288 0 0 0 chr17 27271665 27271697 -68000954 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 793 369 152 0 29 chr17 27271698 27271766 -68000885 - B1_Mur4 SINE Alu -2 148 83 6 793 345 207 295 8 chr17 27272733 27272855 -67999796 - B3 SINE B2 0 216 60 6 793 851 170 0 7 chr17 27272891 27273027 -67999624 - B1_Mur2 SINE Alu -10 139 5 6 793 320 220 1 78 chr17 27273050 27273150 -67999501 - B1_Mus1 SINE Alu -16 101 11 6 793 503 242 0 4 chr17 27273136 27273264 -67999387 - B1_Mur3 SINE Alu -26 123 1 6 793 939 166 14 0 chr17 27273322 27273467 -67999184 + B1_Mus1 SINE Alu 2 148 0 6 793 593 202 126 25 chr17 27273714 27273938 -67998713 + ORR1C2 LTR MaLR 1 307 -87 6 793 182 294 25 166 chr17 27274089 27274216 -67998435 + MIRm SINE MIR 16 119 -157 6 793 851 243 99 0 chr17 27274216 27274418 -67998233 - ID_B1 SINE B4 -1 223 2 6 793 182 294 25 166 chr17 27274418 27274453 -67998198 + MIRm SINE MIR 120 155 -121 6 793 1128 124 41 46 chr17 27274455 27274649 -67998002 + B2_Mm2 SINE B2 1 193 -2 6 793 354 98 0 0 chr17 27274712 27274763 -67997888 + (TGAA)n Simple_repeat Simple_repeat 3 53 0 6 793 258 294 14 14 chr17 27274764 27274833 -67997818 + ID4_ SINE ID 2 70 -13 6 793 663 252 7 13 chr17 27274840 27274989 -67997662 + B1_Mur1 SINE Alu 1 148 -1 6 793 861 157 7 21 chr17 27274992 27275135 -67997516 + B1_Mur4 SINE Alu 1 141 -9 6 793 207 0 0 0 chr17 27275135 27275158 -67997493 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 6 793 311 236 90 0 chr17 27275201 27275290 -67997361 - MIRb SINE MIR -115 153 57 6 793 531 0 0 0 chr17 27276318 27276377 -67996274 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 793 558 0 0 0 chr17 27277180 27277242 -67995409 + (TC)n Simple_repeat Simple_repeat 1 62 0 6 793 424 340 70 9 chr17 27277864 27278078 -67994573 + RMER15 LTR ERVL 347 573 -2 6 793 433 202 73 7 chr17 27278338 27278456 -67994195 - MLT1A0 LTR MaLR -42 366 202 6 793 378 253 21 32 chr17 27278485 27278579 -67994072 - ID_B1 SINE B4 -41 183 91 6 793 643 241 18 48 chr17 27278587 27278753 -67993898 - RSINE1 SINE B4 -3 162 2 6 793 324 273 0 13 chr17 27278769 27278847 -67993804 - MLT1A0 LTR MaLR -314 94 18 6 793 206 174 22 0 chr17 27278920 27278966 -67993685 + GA-rich Low_complexity Low_complexity 2 48 0 6 793 1483 74 16 0 chr17 27279658 27279847 -67992804 - B2_Mm2 SINE B2 -2 193 2 6 793 203 196 19 19 chr17 27279948 27280000 -67992651 + GA-rich Low_complexity Low_complexity 2 53 0 6 793 529 180 91 30 chr17 27280259 27280391 -67992260 - B1_Mur2 SINE Alu -1 148 9 6 793 821 263 63 5 chr17 27280541 27280747 -67991904 - ID_B1 SINE B4 -5 219 2 6 793 630 0 0 0 chr17 27282325 27282395 -67990256 + (GAA)n Simple_repeat Simple_repeat 3 72 0 6 793 946 230 38 5 chr17 27282399 27282609 -67990042 + ID_B1 SINE B4 4 220 -4 6 793 1408 90 11 5 chr17 27284131 27284321 -67988330 + B2_Mm2 SINE B2 1 191 -4 6 793 552 285 75 11 chr17 27284450 27284638 -67988013 + ID_B1 SINE B4 2 201 -23 6 793 311 333 32 71 chr17 27284539 27284639 -67988012 + B1F SINE Alu 21 119 -30 6 793 225 0 0 0 chr17 27284639 27284664 -67987987 + (GTTTG)n Simple_repeat Simple_repeat 2 26 0 6 793 1211 43 0 0 chr17 27284664 27284803 -67987848 - B1_Mm SINE Alu -8 139 1 6 793 311 333 32 71 chr17 27284803 27284827 -67987824 + B1F SINE Alu 120 140 -9 6 793 1459 70 16 5 chr17 27284832 27285019 -67987632 + B2_Mm2 SINE B2 3 191 -4 6 793 873 96 81 0 chr17 27285078 27285214 -67987437 + B1_Mus1 SINE Alu 2 148 0 6 793 195 184 0 0 chr17 27285216 27285254 -67987397 + A-rich Low_complexity Low_complexity 1 38 0 6 793 307 282 0 0 chr17 27286560 27286638 -67986013 + (TG)n Simple_repeat Simple_repeat 1 78 0 6 793 360 238 0 0 chr17 27286664 27286769 -67985882 + (TG)n Simple_repeat Simple_repeat 2 106 0 6 793 188 34 0 33 chr17 27287227 27287257 -67985394 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 793 1217 111 132 29 chr17 27288810 27289015 -67983636 + URR1A DNA MER1_type 1 226 0 6 793 591 15 0 0 chr17 27289330 27289398 -67983253 + (TTCC)n Simple_repeat Simple_repeat 4 71 0 6 793 218 390 109 30 chr17 27291943 27292144 -67980507 + MIR SINE MIR 14 230 -32 6 793 513 346 60 6 chr17 27292508 27292691 -67979960 + Tigger5 DNA MER2_type 9 201 -2205 6 793 248 256 24 49 chr17 27292693 27292775 -67979876 + Tigger5 DNA MER2_type 2291 2370 -36 6 793 585 236 162 19 chr17 27293539 27293699 -67978952 - ID_B1 SINE B4 -41 183 1 6 793 316 262 12 36 chr17 27295230 27295313 -67977338 + MIRc SINE MIR 71 151 -117 6 793 215 354 10 40 chr17 27296110 27296210 -67976441 - L4 LINE RTE -517 1512 1416 6 793 326 321 92 28 chr17 27296449 27296590 -67976061 - MIRb SINE MIR -76 192 43 6 793 1241 48 0 0 chr17 27296817 27296962 -67975689 + B1_Mus1 SINE Alu 2 146 -2 6 793 513 32 0 0 chr17 27298815 27298878 -67973773 + (TG)n Simple_repeat Simple_repeat 1 63 0 6 793 429 274 15 52 chr17 27298953 27299088 -67973563 + B4A SINE B4 1 130 -162 6 793 425 219 183 35 chr17 27299319 27299461 -67973190 + B4A SINE B4 67 229 -63 6 793 478 240 89 44 chr17 27299463 27299598 -67973053 + B1_Mur3 SINE Alu 2 142 -7 6 793 560 293 36 108 chr17 27299608 27299830 -67972821 + B3 SINE B2 1 206 -10 6 793 230 231 0 19 chr17 27299887 27299940 -67972711 + B4A SINE B4 216 267 -25 6 793 267 41 61 0 chr17 27299962 27300011 -67972640 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 793 220 250 118 0 chr17 27301247 27301315 -67971336 - PB1D10 SINE Alu 0 117 42 6 793 414 328 16 8 chr17 27301444 27301567 -67971084 - ID_B1 SINE B4 -100 124 1 6 793 745 179 13 20 chr17 27301611 27302072 -67970579 + (TG)n Simple_repeat Simple_repeat 1 457 0 6 793 180 328 30 0 chr17 27302268 27302335 -67970316 - L3 LINE CR1 -431 4058 3990 6 793 499 306 13 34 chr17 27303601 27303750 -67968901 + ID_B1 SINE B4 73 218 -6 6 793 300 53 0 0 chr17 27304360 27304398 -67968253 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 793 204 358 0 31 chr17 27304830 27304928 -67967723 + GA-rich Low_complexity Low_complexity 3 97 0 6 793 22 35 0 0 chr17 27304996 27305025 -67967626 + AT_rich Low_complexity Low_complexity 1 29 0 6 793 275 115 33 0 chr17 27305039 27305100 -67967551 + (CATA)n Simple_repeat Simple_repeat 2 64 0 6 793 514 303 39 13 chr17 27305110 27305264 -67967387 - RSINE1 SINE B4 0 165 8 6 793 4009 91 66 0 chr17 27305326 27305874 -67966777 + MT2B2 LTR ERVL 1 584 0 6 793 263 200 51 51 chr17 27307188 27307267 -67965384 - MIRc SINE MIR -142 126 48 6 793 323 315 11 0 chr17 27308389 27308478 -67964173 + PB1D10 SINE Alu 1 90 -27 6 793 519 240 83 0 chr17 27308401 27308522 -67964129 + ID_B1 SINE B4 94 224 0 6 793 459 213 17 57 chr17 27309249 27309392 -67963259 + B1F SINE Alu 1 270 -41 6 793 377 95 16 0 chr17 27310305 27310368 -67962283 + (TG)n Simple_repeat Simple_repeat 1 64 0 6 793 921 217 0 21 chr17 27310372 27310565 -67962086 - B4 SINE B4 -21 271 83 6 793 259 311 40 0 chr17 27310925 27310999 -67961652 - MIR3 SINE MIR -7 201 125 6 793 296 327 9 43 chr17 27311127 27311242 -67961409 + MIR SINE MIR 40 150 -112 6 793 264 254 128 77 chr17 27311520 27311716 -67960935 + MT2B LTR ERVL 73 278 -323 6 793 737 97 26 0 chr17 27311629 27311742 -67960909 + B1_Mus1 SINE Alu 32 147 -1 6 793 433 331 60 7 chr17 27311879 27312028 -67960623 + RSINE1 SINE B4 3 159 -6 6 793 315 0 0 0 chr17 27312028 27312063 -67960588 + (TG)n Simple_repeat Simple_repeat 1 35 0 7 793 243 0 0 0 chr17 27312063 27312089 -67960562 + (GA)n Simple_repeat Simple_repeat 1 27 0 7 793 229 295 93 21 chr17 27312977 27313074 -67959577 - MIRb SINE MIR -45 223 120 7 793 324 0 0 0 chr17 27314150 27314186 -67958465 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 7 793 1226 36 0 0 chr17 27314193 27314333 -67958318 - B1_Mm SINE Alu -7 140 1 7 793 1462 74 5 5 chr17 27314335 27314526 -67958125 - B2_Mm1a SINE B2 0 193 3 7 793 319 326 59 29 chr17 27314582 27314718 -67957933 + RSINE1 SINE B4 25 164 -1 7 793 210 143 0 0 chr17 27314743 27314778 -67957873 + (TAA)n Simple_repeat Simple_repeat 1 35 0 7 793 300 111 0 0 chr17 27314776 27314821 -67957830 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 7 793 1218 34 0 14 chr17 27314822 27314970 -67957681 - B1_Mus2 SINE Alu -1 146 1 7 793 22 0 0 0 chr17 27314970 27314992 -67957659 + AT_rich Low_complexity Low_complexity 1 22 0 7 793 401 141 0 0 chr17 27315005 27315067 -67957584 + B1_Mur4 SINE Alu 3 64 -86 7 793 876 211 90 14 chr17 27315067 27315429 -67957222 + RLTR20D LTR ERVK 1 458 -110 7 793 743 271 133 16 chr17 27315422 27315695 -67956956 + ORR1D2 LTR MaLR 78 384 0 7 793 756 294 186 18 chr17 27315831 27316271 -67956380 + Lx8 LINE L1 6592 7105 -368 7 793 371 329 94 29 chr17 27316298 27316542 -67956109 + Lx8 LINE L1 7208 7467 -6 7 793 454 281 0 26 chr17 27317324 27317426 -67955225 + PB1D10 SINE Alu 3 104 -13 7 793 304 21 0 59 chr17 27317426 27317477 -67955174 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 7 793 454 281 0 26 chr17 27317477 27317491 -67955160 + PB1D10 SINE Alu 105 116 -1 7 793 897 152 27 33 chr17 27317565 27317715 -67954936 - B1_Mur4 SINE Alu -1 149 1 7 793 490 242 214 23 chr17 27317716 27317847 -67954804 + B3 SINE B2 32 187 -11 7 793 423 0 0 0 chr17 27317847 27317894 -67954757 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 793 234 231 0 0 chr17 27318549 27318601 -67954050 + C-rich Low_complexity Low_complexity 3 54 0 7 793 189 208 20 20 chr17 27318846 27318895 -67953756 - L3 LINE CR1 -115 4374 4326 7 793 355 224 81 0 chr17 27318998 27319108 -67953543 - B1F SINE Alu -23 126 1 7 793 278 315 98 98 chr17 27319108 27319312 -67953339 - MIRb SINE MIR -63 205 2 7 793 388 307 62 56 chr17 27319782 27319944 -67952707 - L3 LINE CR1 -756 3733 3571 7 793 357 109 0 0 chr17 27320008 27320063 -67952588 + (CA)n Simple_repeat Simple_repeat 1 55 0 7 793 216 0 0 0 chr17 27320100 27320124 -67952527 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 793 222 37 0 0 chr17 27320158 27320185 -67952466 + (CA)n Simple_repeat Simple_repeat 1 27 0 7 793 362 211 0 9 chr17 27320219 27320329 -67952322 + (CA)n Simple_repeat Simple_repeat 1 109 0 7 793 402 21 0 0 chr17 27320414 27320461 -67952190 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 793 276 30 0 0 chr17 27320495 27320528 -67952123 + (CA)n Simple_repeat Simple_repeat 1 33 0 7 793 206 236 0 0 chr17 27320771 27320826 -67951825 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 793 428 289 29 0 chr17 27321052 27321156 -67951495 - B3A SINE B2 -49 149 43 7 793 1347 113 0 10 chr17 27321186 27321382 -67951269 - B2_Mm2 SINE B2 0 195 2 7 793 467 258 94 72 chr17 27321387 27321567 -67951084 - B3A SINE B2 0 198 15 7 793 396 325 76 38 chr17 27322059 27322184 -67950467 + RMER15 LTR ERVL 346 468 -107 7 793 1454 168 299 72 chr17 27322184 27322615 -67950036 - MT2A LTR ERVL -2 531 3 7 793 396 325 76 38 chr17 27322615 27322700 -67949951 + RMER15 LTR ERVL 469 563 -12 7 793 440 333 44 58 chr17 27322735 27322818 -67949833 - ID_B1 SINE B4 -1 223 1 7 793 1117 49 0 0 chr17 27322818 27322961 -67949690 - B2_Mm2 SINE B2 -52 143 1 7 793 533 240 40 33 chr17 27322961 27323112 -67949539 - ID_B1 SINE B4 -68 156 5 7 793 336 299 33 64 chr17 27323363 27323550 -67949101 - MLT1H1 LTR MaLR -364 231 8 7 793 542 167 10 10 chr17 27324610 27324713 -67947938 + B3A SINE B2 1 103 -95 7 793 956 117 13 46 chr17 27325679 27325831 -67946820 + B1_Mus2 SINE Alu 1 147 0 7 793 434 254 6 5 chr17 27329060 27329163 -67943488 + PB1D10 SINE Alu 28 147 0 7 793 281 292 56 0 chr17 27332623 27332712 -67939939 + MIR3 SINE MIR 112 205 -3 7 793 1402 209 83 55 chr17 27334831 27335230 -67937421 - RMER4A LTR ERVK 0 466 57 7 793 1245 103 51 0 chr17 27335230 27335405 -67937246 + B2_Mm2 SINE B2 2 185 -10 7 793 1446 34 40 6 chr17 27335493 27335669 -67936982 + B2_Mm2 SINE B2 2 183 -12 7 793 180 0 0 0 chr17 27335669 27335689 -67936962 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 7 793 220 163 20 39 chr17 27335689 27335740 -67936911 + B3 SINE B2 60 109 -107 7 793 294 156 13 0 chr17 27335743 27335820 -67936831 - RMER4A LTR ERVK -373 93 17 7 793 598 252 147 15 chr17 27336484 27336681 -67935970 - ID_B1 SINE B4 -1 223 1 7 793 299 265 50 20 chr17 27338916 27339016 -67933635 + PB1D7 SINE Alu 18 120 0 7 793 941 211 113 0 chr17 27339019 27339213 -67933438 + B3 SINE B2 1 216 0 7 793 189 308 92 0 chr17 27339257 27339322 -67933329 + MIRc SINE MIR 166 236 -32 7 793 385 302 69 15 chr17 27339744 27339875 -67932776 + B1F SINE Alu 3 140 -9 7 793 243 0 0 0 chr17 27340034 27340061 -67932590 + (A)n Simple_repeat Simple_repeat 1 27 0 7 793 24 53 0 0 chr17 27341167 27341205 -67931446 + GC_rich Low_complexity Low_complexity 1 38 0 7 793 26 50 0 0 chr17 27341418 27341458 -67931193 + GC_rich Low_complexity Low_complexity 1 40 0 7 793 493 261 133 41 chr17 27341949 27342145 -67930506 + B3 SINE B2 1 214 -2 7 793 222 37 0 0 chr17 27343798 27343825 -67928826 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 793 349 269 9 9 chr17 27343842 27343951 -67928700 + (TG)n Simple_repeat Simple_repeat 2 110 0 7 793 699 281 128 4 chr17 27345048 27345305 -67927346 - B4A SINE B4 -1 291 3 7 793 934 82 0 93 chr17 27345333 27345382 -67927269 - B1_Mus1 SINE Alu 0 148 113 7 793 3226 58 8 2 chr17 27345382 27345778 -67926873 + MTB LTR MaLR 3 400 0 7 793 934 82 0 93 chr17 27345778 27345890 -67926761 - B1_Mus1 SINE Alu -36 112 2 7 793 435 238 0 87 chr17 27345788 27345903 -67926748 - MT2B LTR ERVL -344 257 153 7 793 728 251 12 24 chr17 27345906 27346073 -67926578 - B3A SINE B2 -33 165 1 7 793 2422 147 73 25 chr17 27347199 27347681 -67924970 - RLTR16 LTR ERVK 0 505 1 7 793 3198 160 162 63 chr17 27347808 27348621 -67924030 - RMER19B LTR ERVK -8 894 1 7 793 334 278 36 27 chr17 27348753 27348864 -67923787 + MIR SINE MIR 18 129 -79 7 793 2190 111 115 11 chr17 27350727 27351101 -67921550 + MTC LTR MaLR 1 413 -8 7 793 375 290 207 12 chr17 27351306 27351557 -67921094 + L2 LINE L2 2749 3048 -371 7 793 2382 134 106 54 chr17 27351981 27352424 -67920227 - RMER4A LTR ERVK 0 466 1 7 793 474 231 48 0 chr17 27353823 27353927 -67918724 - ID_B1 SINE B4 -7 217 109 7 793 205 329 0 0 chr17 27354229 27354302 -67918349 + (CGTG)n Simple_repeat Simple_repeat 2 74 0 7 793 259 222 16 0 chr17 27355417 27355480 -67917171 + C-rich Low_complexity Low_complexity 2 65 0 7 793 374 316 22 43 chr17 27356665 27356804 -67915847 + ID_B1 SINE B4 88 223 -1 7 793 254 143 20 0 chr17 27356804 27356853 -67915798 + GA-rich Low_complexity Low_complexity 1 50 0 7 793 740 122 9 0 chr17 27356869 27356984 -67915667 + B1_Mur2 SINE Alu 9 124 -25 7 793 332 243 114 87 chr17 27356871 27357020 -67915631 + MT2B LTR ERVL 175 327 -274 7 793 1363 41 59 6 chr17 27357128 27357298 -67915353 + B2_Mm2 SINE B2 3 181 -14 7 793 1177 82 0 0 chr17 27357319 27357466 -67915185 - B1_Mus1 SINE Alu -1 147 1 7 793 26 0 0 0 chr17 27357466 27357492 -67915159 + AT_rich Low_complexity Low_complexity 1 26 0 7 793 847 231 37 60 chr17 27357492 27357708 -67914943 + B4 SINE B4 80 290 -2 7 793 2503 183 28 22 chr17 27358302 27358804 -67913847 + RLTR18B LTR ERVK 1 505 -7 7 793 419 214 112 64 chr17 27358850 27358975 -67913676 - ID_B1 SINE B4 0 224 94 7 793 276 266 72 0 chr17 27359071 27359151 -67913500 - PB1D7 SINE Alu -56 92 7 7 793 314 293 0 0 chr17 27359193 27359268 -67913383 - MER58B DNA MER1_type -126 215 141 7 793 395 204 67 11 chr17 27359278 27359367 -67913284 + PB1D10 SINE Alu 22 115 -2 7 793 339 300 182 0 chr17 27359377 27359487 -67913164 + B1F2 SINE Alu 1 130 -19 7 793 765 241 71 114 chr17 27359648 27359888 -67912763 + ORR1D2 LTR MaLR 35 251 -119 7 793 2347 91 75 9 chr17 27359888 27360233 -67912418 + RLTR9A LTR ERVK 1 368 0 7 793 765 241 71 114 chr17 27360233 27360343 -67912308 + ORR1D2 LTR MaLR 252 369 -1 7 793 1128 128 0 0 chr17 27360533 27360712 -67911939 + (TTC)n Simple_repeat Simple_repeat 1 179 0 7 793 540 221 98 0 chr17 27360715 27360837 -67911814 - B3 SINE B2 -4 212 79 7 793 192 326 103 21 chr17 27360951 27361048 -67911603 - MIRc SINE MIR -113 155 51 7 793 272 208 90 22 chr17 27361625 27361726 -67910925 - B1F2 SINE Alu -40 110 1 7 793 245 308 0 13 chr17 27362126 27362205 -67910446 + L3 LINE CR1 3554 3631 -858 7 793 291 54 0 0 chr17 27362803 27362840 -67909811 + (GGGA)n Simple_repeat Simple_repeat 4 40 0 7 793 707 201 45 0 chr17 27366246 27366380 -67906271 + B3 SINE B2 2 141 -75 7 793 255 79 0 0 chr17 27366390 27366428 -67906223 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 793 423 0 0 0 chr17 27366428 27366475 -67906176 + (GA)n Simple_repeat Simple_repeat 1 47 0 7 793 761 199 13 20 chr17 27367716 27367865 -67904786 - B1F2 SINE Alu 0 149 2 7 793 213 180 175 32 chr17 27367868 27367931 -67904720 - B1_Mur3 SINE Alu -2 147 76 7 793 533 212 102 0 chr17 27367876 27367994 -67904657 - ID_B1 SINE B4 -8 216 87 7 793 276 314 53 69 chr17 27368168 27368194 -67904457 - LTR33A LTR ERVL -254 266 245 7 793 495 48 0 0 chr17 27368194 27368256 -67904395 + (TG)n Simple_repeat Simple_repeat 2 63 0 7 793 276 314 53 69 chr17 27368256 27368417 -67904234 - LTR33A LTR ERVL -276 244 82 7 793 546 16 0 0 chr17 27368529 27368592 -67904059 + (GGA)n Simple_repeat Simple_repeat 2 64 0 8 793 1124 35 74 205 chr17 27368645 27368725 -67903926 - B2_Mm2 SINE B2 -8 187 111 8 793 1557 47 16 10 chr17 27368725 27368918 -67903733 + B2_Mm2 SINE B2 1 194 -1 8 793 1124 35 74 205 chr17 27368918 27368946 -67903705 - B2_Mm2 SINE B2 -85 110 110 8 793 561 30 0 0 chr17 27368946 27369013 -67903638 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 8 793 1124 35 74 205 chr17 27369013 27369118 -67903533 - B2_Mm2 SINE B2 -85 110 1 8 793 458 252 161 15 chr17 27369131 27369268 -67903383 - ID_B1 SINE B4 -67 157 1 8 793 261 0 0 0 chr17 27369687 27369716 -67902935 + (TG)n Simple_repeat Simple_repeat 1 29 0 8 793 1366 199 119 35 chr17 27370692 27371036 -67901615 - ORR1D1 LTR MaLR -1 373 1 8 793 223 181 71 12 chr17 27371123 27371207 -67901444 + (TATAG)n Simple_repeat Simple_repeat 2 90 0 8 793 189 333 21 32 chr17 27371724 27371817 -67900834 + L2b LINE L2 3281 3372 -3 8 793 505 203 101 43 chr17 27371845 27371984 -67900667 + B1F2 SINE Alu 1 147 -2 8 793 1203 258 147 40 chr17 27372017 27372535 -67900116 - RMER4B LTR ERVK -12 573 1 8 793 322 282 32 51 chr17 27372766 27372833 -67899818 + L1MC5 LINE L1 7659 7724 -237 8 793 1067 193 222 29 chr17 27372833 27373148 -67899503 + MTEb LTR MaLR 4 379 0 8 793 322 282 32 51 chr17 27373148 27373237 -67899414 + L1MC5 LINE L1 7725 7812 -149 8 793 440 252 0 118 chr17 27373320 27373464 -67899187 - MT2B LTR ERVL -299 302 176 8 793 800 171 16 0 chr17 27373338 27373467 -67899184 - B1_Mur2 SINE Alu -10 139 9 8 793 435 271 49 8 chr17 27373506 27373629 -67899022 - B3A SINE B2 -70 128 1 8 793 868 172 10 113 chr17 27375275 27375478 -67897173 + B2_Mm2 SINE B2 1 182 -13 8 793 380 184 10 94 chr17 27375478 27375574 -67897077 + MT2B LTR ERVL 171 258 -343 8 793 748 133 0 0 chr17 27375490 27375603 -67897048 + B1_Mus2 SINE Alu 20 132 -15 8 793 2579 115 112 21 chr17 27376420 27376518 -67896133 - RMER4A LTR ERVK 0 466 369 8 793 318 50 0 0 chr17 27376518 27376558 -67896093 + (GA)n Simple_repeat Simple_repeat 1 40 0 8 793 2579 115 112 21 chr17 27376558 27376886 -67895765 - RMER4A LTR ERVK -98 368 1 8 793 495 239 92 0 chr17 27377324 27377454 -67895197 - ID_B1 SINE B4 0 224 83 8 793 392 240 33 12 chr17 27377457 27377568 -67895083 - PB1D10 SINE Alu -3 124 3 8 793 283 371 72 23 chr17 27377813 27378078 -67894573 + L2c LINE L2 3110 3387 0 8 793 300 199 306 7 chr17 27378633 27378778 -67893873 + ID_B1 SINE B4 3 190 -34 8 793 517 261 14 36 chr17 27378781 27378920 -67893731 + B1_Mur1 SINE Alu 1 136 -13 8 793 317 375 0 0 chr17 27379293 27379413 -67893238 - L2a LINE L2 -12 3414 3295 8 793 567 66 0 0 chr17 27379419 27379495 -67893156 + (CA)n Simple_repeat Simple_repeat 2 77 0 8 793 1736 197 88 8 chr17 27379748 27380136 -67892515 + MTD LTR MaLR 1 419 0 8 793 1506 70 16 0 chr17 27380153 27380340 -67892311 + B2_Mm2 SINE B2 1 190 -5 8 793 305 239 0 0 chr17 27380510 27380577 -67892074 - ID4 SINE ID -4 79 13 8 793 409 222 0 36 chr17 27381394 27381478 -67891173 - ID2 SINE ID -2 81 1 8 793 240 214 0 0 chr17 27381478 27381523 -67891128 - ZP3AR Satellite Satellite -116 96 52 8 793 293 254 0 0 chr17 27381601 27381664 -67890987 - MIRm SINE MIR -123 153 91 8 793 442 350 82 28 chr17 27382670 27383097 -67889554 + MLT1H2 LTR MaLR 83 478 -11 8 793 199 289 11 22 chr17 27383104 27383196 -67889455 + L2 LINE L2 2595 2685 -734 8 793 324 266 29 105 chr17 27383695 27383800 -67888851 + B4 SINE B4 108 204 -88 8 793 955 197 20 29 chr17 27383847 27384051 -67888600 + B3 SINE B2 6 207 -9 8 793 620 294 28 22 chr17 27384073 27384254 -67888397 + B3A SINE B2 2 183 -15 8 793 360 0 0 0 chr17 27384262 27384302 -67888349 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 8 793 1189 50 0 0 chr17 27384321 27384462 -67888189 - B1_Mus1 SINE Alu -6 142 2 8 793 251 250 0 0 chr17 27384497 27384545 -67888106 + B4 SINE B4 245 292 0 8 793 572 73 12 0 chr17 27384560 27384642 -67888009 + (CA)n Simple_repeat Simple_repeat 2 84 0 8 793 508 184 133 0 chr17 27385304 27385402 -67887249 - PB1D9 SINE Alu -9 111 1 8 793 532 258 15 23 chr17 27385419 27385550 -67887101 - ID_B1 SINE B4 -59 165 36 8 793 742 321 67 8 chr17 27386502 27386769 -67885882 + B4A SINE B4 9 291 -1 8 793 1261 34 0 7 chr17 27386770 27386918 -67885733 + B1_Mus1 SINE Alu 2 148 0 8 793 189 0 0 0 chr17 27386918 27386939 -67885712 + (CAAAAA)n Simple_repeat Simple_repeat 4 24 0 8 793 336 339 70 73 chr17 27388060 27388404 -67884247 + L1ME3B LINE L1 5721 6063 -177 8 793 201 154 0 0 chr17 27388717 27388756 -67883895 + CT-rich Low_complexity Low_complexity 2 40 0 8 793 712 168 0 0 chr17 27388771 27388890 -67883761 - B1_Mm SINE Alu -22 125 7 8 793 694 243 50 28 chr17 27388894 27389076 -67883575 - B3A SINE B2 -5 193 8 8 793 318 261 33 57 chr17 27389086 27389208 -67883443 - MTEb LTR MaLR -10 369 251 8 793 478 232 104 19 chr17 27389235 27389389 -67883262 - MTEb LTR MaLR -208 171 5 8 793 598 274 78 15 chr17 27389389 27389593 -67883058 + ID_B1 SINE B4 3 219 -5 8 793 271 211 0 165 chr17 27389746 27389766 -67882885 - B4A SINE B4 -120 172 97 8 793 344 171 42 14 chr17 27389766 27389837 -67882814 - PB1D7 SINE Alu -36 84 12 8 793 382 333 140 10 chr17 27390037 27390237 -67882414 - MLT1D LTR MaLR -1 504 279 8 793 252 0 0 0 chr17 27390425 27390453 -67882198 + (TTA)n Simple_repeat Simple_repeat 3 30 0 8 793 216 171 0 0 chr17 27390545 27390586 -67882065 + (CA)n Simple_repeat Simple_repeat 1 41 0 8 793 490 252 43 0 chr17 27390679 27390794 -67881857 - RSINE1 SINE B4 -31 134 15 8 793 1048 122 0 0 chr17 27390919 27391066 -67881585 + B1_Mus1 SINE Alu 1 147 -1 8 793 519 60 0 0 chr17 27391080 27391147 -67881504 + (AGGGGG)n Simple_repeat Simple_repeat 2 68 0 8 793 460 280 111 18 chr17 27391391 27391562 -67881089 - B3 SINE B2 -28 188 2 8 793 405 248 122 18 chr17 27392019 27392058 -67880593 - B4A SINE B4 -109 183 142 8 793 878 132 21 7 chr17 27392058 27392203 -67880448 - B1_Mus1 SINE Alu 0 148 2 8 793 405 248 122 18 chr17 27392203 27392327 -67880324 - B4A SINE B4 -151 141 5 8 793 373 293 8 17 chr17 27392337 27392455 -67880196 - PB1D7 SINE Alu -1 119 3 8 793 37 39 0 0 chr17 27392546 27392597 -67880054 + AT_rich Low_complexity Low_complexity 1 51 0 8 793 321 225 0 0 chr17 27392597 27392668 -67879983 + PB1D10 SINE Alu 27 97 -20 8 794 2122 156 81 36 chr17 27394275 27395087 -67877564 - RMER19B LTR ERVK 0 902 8 8 794 225 0 0 0 chr17 27395111 27395136 -67877515 + (CA)n Simple_repeat Simple_repeat 1 25 0 8 794 183 80 0 0 chr17 27395489 27395514 -67877137 + (CCCCCA)n Simple_repeat Simple_repeat 5 29 0 8 794 1063 96 0 0 chr17 27396543 27396689 -67875962 - B1_Mm SINE Alu 0 147 2 8 794 3138 151 127 141 chr17 27396768 27396843 -67875808 - RMER19B LTR ERVK -34 868 798 8 794 1093 71 0 0 chr17 27396843 27396983 -67875668 + B1_Mus1 SINE Alu 1 140 -8 8 794 3138 151 127 141 chr17 27396983 27397787 -67874864 - RMER19B LTR ERVK -105 797 1 8 794 578 235 53 0 chr17 27397857 27397989 -67874662 - ID_B1 SINE B4 -2 222 84 8 794 558 250 29 7 chr17 27397954 27398085 -67874566 + B3 SINE B2 44 178 -38 8 794 396 0 0 0 chr17 27398085 27398129 -67874522 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 794 296 278 17 92 chr17 27398437 27398556 -67874095 + PB1D7 SINE Alu 3 112 -8 8 794 892 169 82 94 chr17 27399221 27399476 -67873175 + RMER17A2 LTR ERVK 1 252 -654 8 794 369 0 0 0 chr17 27399593 27399634 -67873017 + (GA)n Simple_repeat Simple_repeat 2 42 0 8 794 1346 279 16 10 chr17 27400002 27400389 -67872262 - RodERV21-int LTR ERV1 -202 4789 4401 8 794 2816 73 2 20 chr17 27400392 27400530 -67872121 - MTA_Mm LTR MaLR 0 396 264 8 794 3406 59 48 0 chr17 27400530 27400990 -67871661 + RLTR45 LTR ERVK 1 482 0 8 794 2816 73 2 20 chr17 27400990 27401254 -67871397 - MTA_Mm LTR MaLR -133 263 1 8 794 2480 108 44 52 chr17 27401833 27402312 -67870339 - IAPLTR2_Mm LTR ERVK 0 475 1 8 794 25955 9 1 0 chr17 27402312 27405266 -67867385 - IAPEz-int LTR ERVK 0 6481 3525 8 794 905 80 24 0 chr17 27405266 27405391 -67867260 - IAPEz-int LTR ERVK -2770 4910 4783 8 794 1791 107 4 4 chr17 27405386 27405648 -67867003 - IAPEz-int LTR ERVK -5183 2497 2236 8 794 440 66 0 32 chr17 27405637 27405700 -67866951 - IAPEz-int LTR ERVK -5062 1419 1359 8 794 4758 62 0 34 chr17 27405700 27406369 -67866282 - IAPEz-int LTR ERVK -5819 662 17 8 794 360 127 0 0 chr17 27406350 27406405 -67866246 - IAPEz-int LTR ERVK -1930 57 3 8 794 2480 108 44 52 chr17 27406407 27406886 -67865765 - IAPLTR2_Mm LTR ERVK 0 475 1 8 794 372 349 58 15 chr17 27406890 27407219 -67865432 - MER52-int LTR ERV1 -1073 6018 5676 8 794 1173 54 0 0 chr17 27407734 27407881 -67864770 - B1_Mus2 SINE Alu 0 147 1 8 794 311 280 72 36 chr17 27407892 27408112 -67864539 - MER52-int LTR ERV1 -3365 4842 4664 8 794 2464 109 36 10 chr17 27408570 27408959 -67863692 + RLTR9D LTR ERVK 1 399 -4 8 794 6256 240 20 24 chr17 27408968 27410671 -67861980 + ETnERV-int LTR ERVK 3 1656 -1658 8 794 1611 306 52 40 chr17 27410681 27411105 -67861546 + ETnERV-int LTR ERVK 2715 3106 -5111 8 794 2563 131 48 34 chr17 27411105 27411580 -67861071 - RLTR45 LTR ERVK 0 482 1 8 794 1611 309 50 21 chr17 27411580 27411963 -67860688 + ETnERV-int LTR ERVK 3107 3513 -4704 8 794 8785 125 25 42 chr17 27411962 27413427 -67859224 + ETnERV2-int LTR ERVK 4980 6420 -986 8 794 338 127 40 40 chr17 27413645 27413719 -67858932 + ETnERV2-int LTR ERVK 7331 7404 -2 8 794 1501 146 24 4 chr17 27413720 27413967 -67858684 + RLTR9D LTR ERVK 1 252 -151 8 794 381 275 36 78 chr17 27414329 27414522 -67858129 - RodERV21-int LTR ERV1 -2273 2718 2534 8 794 2714 91 30 12 chr17 27414526 27414928 -67857723 + RLTR9E LTR ERVK 1 409 0 8 794 8463 200 11 20 chr17 27414929 27415739 -67856912 + ETnERV-int LTR ERVK 2 803 -2511 8 794 1880 141 7 7 chr17 27415739 27416047 -67856604 + RLTR10E LTR ERVK 1 308 -3 8 794 8463 283 32 27 chr17 27416047 27418110 -67854541 + ETnERV-int LTR ERVK 804 2750 -3417 8 794 286 298 37 28 chr17 27418256 27418363 -67854288 - RMER17C-int LTR ERVK -2769 469 362 8 794 4325 10 0 0 chr17 27418529 27419022 -67853629 + MT2_Mm LTR ERVL 1 493 0 8 794 46602 14 0 0 chr17 27419022 27424380 -67848271 + MERVL-int LTR ERVL 1 5360 -125 8 794 379 167 46 35 chr17 27424380 27424467 -67848184 + ORR1A3-int LTR MaLR 553 640 -1323 8 794 301 0 0 0 chr17 27424467 27424505 -67848146 + MERVL-int LTR ERVL 5448 5485 0 8 794 4311 12 0 0 chr17 27424505 27424998 -67847653 + MT2_Mm LTR ERVL 1 493 0 8 794 2690 19 3 0 chr17 27425209 27425530 -67847121 - RLTRETN_Mm LTR ERVK 0 322 1 8 794 6889 26 7 2 chr17 27425530 27426370 -67846281 - MMETn-int LTR ERVK 0 4844 4001 8 794 5017 31 2 0 chr17 27426372 27426976 -67845675 - MMETn-int LTR ERVK -4239 605 1 8 794 2687 19 3 0 chr17 27426976 27427297 -67845354 - RLTRETN_Mm LTR ERVK 0 322 1 8 794 423 0 0 0 chr17 27427740 27427787 -67844864 + (GA)n Simple_repeat Simple_repeat 1 47 0 8 794 3485 124 102 13 chr17 27427789 27428465 -67844186 + RMER17B LTR ERVK 223 958 0 8 794 2471 146 27 79 chr17 27429070 27429628 -67843023 + RLTR24 LTR ERV1 1 529 0 8 794 747 147 8 6 chr17 27429911 27430043 -67842608 + B1_Mus2 SINE Alu 22 146 -1 9 794 1357 66 61 0 chr17 27430096 27430277 -67842374 - B2_Mm2 SINE B2 -3 192 1 9 794 862 256 19 0 chr17 27431767 27431978 -67840673 + ID_B1 SINE B4 5 219 -5 9 794 246 256 146 0 chr17 27432678 27432760 -67839891 - MTEa LTR MaLR -7 372 279 9 794 391 296 0 39 chr17 27432950 27433052 -67839599 + PB1D10 SINE Alu 12 109 -8 9 794 1986 111 259 0 chr17 27433499 27433931 -67838720 + RMER6C LTR ERVK 133 676 -14 9 794 230 189 0 0 chr17 27434011 27434048 -67838603 - B1_Mus2 SINE Alu -108 39 3 9 794 618 206 0 58 chr17 27434187 27434326 -67838325 - B1_Mur3 SINE Alu -12 137 7 9 794 274 310 58 0 chr17 27434343 27434430 -67838221 - B4A SINE B4 -83 209 118 9 794 240 265 0 29 chr17 27434441 27434511 -67838140 - B4A SINE B4 -224 68 1 9 794 1185 61 0 6 chr17 27436256 27436422 -67836229 + RMER19A LTR ERVK 573 737 0 9 794 3545 141 19 30 chr17 27436422 27437046 -67835605 + MurERV4_19-int LTR ERVK 1 617 -5163 9 794 254 347 64 47 chr17 27438157 27438390 -67834261 + Charlie8 DNA MER1_type 62 298 -2130 9 794 235 250 0 45 chr17 27438711 27438799 -67833852 + L1ME3 LINE L1 5989 6072 -90 9 794 229 258 30 23 chr17 27439074 27439162 -67833489 + MIR SINE MIR 28 126 -142 9 794 5435 89 58 85 chr17 27443121 27444052 -67828599 - RMER17A2 LTR ERVK 0 906 1 9 794 248 320 13 0 chr17 27444162 27444237 -67828414 + Lx8 LINE L1 7164 7239 -234 9 794 1389 229 71 3 chr17 27445259 27445548 -67827103 + MTEa LTR MaLR 1 306 -73 9 794 282 29 0 0 chr17 27445548 27445583 -67827068 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 9 794 1389 229 71 3 chr17 27445583 27445643 -67827008 + MTEa LTR MaLR 307 373 -6 9 794 227 226 0 19 chr17 27445727 27445781 -67826870 - Charlie12 DNA MER1_type -3 2870 2818 9 794 198 0 0 0 chr17 27445821 27445843 -67826808 + (TA)n Simple_repeat Simple_repeat 1 22 0 9 794 456 104 0 0 chr17 27448137 27448204 -67824447 + (TGGA)n Simple_repeat Simple_repeat 4 70 0 9 794 210 323 72 8 chr17 27451514 27451639 -67821012 - MIRc SINE MIR -6 262 130 9 794 342 0 0 0 chr17 27451679 27451717 -67820934 + (GA)n Simple_repeat Simple_repeat 1 38 0 9 794 195 42 0 0 chr17 27456046 27456070 -67816581 + (CAG)n Simple_repeat Simple_repeat 1 24 0 9 794 301 23 0 0 chr17 27458206 27458249 -67814402 + Lx LINE L1 6600 6642 -12 9 794 1510 0 0 19 chr17 27458945 27459153 -67813498 + (TCTCCC)n Simple_repeat Simple_repeat 1 204 0 9 794 272 91 23 0 chr17 27459153 27459197 -67813454 + (TC)n Simple_repeat Simple_repeat 2 46 0 9 794 2102 136 52 92 chr17 27459802 27460039 -67812612 + RMER4A LTR ERVK 8 248 -218 9 794 498 17 0 0 chr17 27460039 27460098 -67812553 + (TG)n Simple_repeat Simple_repeat 1 59 0 9 794 2102 136 52 92 chr17 27460098 27460338 -67812313 + RMER4A LTR ERVK 249 466 0 9 794 1410 39 78 6 chr17 27460996 27461014 -67811637 - B2_Mm1a SINE B2 0 193 176 9 794 243 0 0 0 chr17 27461014 27461041 -67811610 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 9 794 1410 39 78 6 chr17 27461041 27461201 -67811450 - B2_Mm1a SINE B2 -18 175 3 9 794 230 230 86 65 chr17 27463480 27463573 -67809078 - LTR75 LTR ERVL -362 200 106 9 794 339 25 0 0 chr17 27467249 27467289 -67805362 + (CCA)n Simple_repeat Simple_repeat 2 41 0 9 794 277 111 0 0 chr17 27469942 27469987 -67802664 + L2a LINE L2 3382 3426 0 9 794 337 102 0 0 chr17 27471628 27471677 -67800974 - L2a LINE L2 -3 3423 3375 9 794 2453 136 53 91 chr17 27475373 27475475 -67797176 + RLTR24 LTR ERV1 1 104 -425 9 794 3433 73 51 2 chr17 27475475 27475928 -67796723 - MT2C_Mm LTR ERVL 0 475 1 9 794 2453 136 53 91 chr17 27475928 27476374 -67796277 + RLTR24 LTR ERV1 105 528 -1 9 794 192 40 0 0 chr17 27477285 27477310 -67795341 + (TGG)n Simple_repeat Simple_repeat 3 27 0 9 794 423 0 0 0 chr17 27478217 27478264 -67794387 + (CA)n Simple_repeat Simple_repeat 1 47 0 9 794 313 319 39 77 chr17 27478342 27478388 -67794263 - CR1_Mam LINE CR1 -1794 410 359 9 794 2726 133 2 24 chr17 27478388 27478804 -67793847 - MTB_Mm LTR MaLR 0 407 1 9 794 313 319 39 77 chr17 27478804 27478991 -67793660 - CR1_Mam LINE CR1 -1846 358 186 9 794 192 97 0 0 chr17 27479331 27479362 -67793289 + (G)n Simple_repeat Simple_repeat 1 31 0 9 794 288 111 0 0 chr17 27480074 27480119 -67792532 + (GGA)n Simple_repeat Simple_repeat 1 45 0 9 794 216 287 217 47 chr17 27481813 27482025 -67790626 + L2a LINE L2 3179 3426 0 9 794 198 0 0 0 chr17 27482773 27482795 -67789856 + (TG)n Simple_repeat Simple_repeat 2 23 0 9 794 247 211 20 31 chr17 27485204 27485276 -67787375 + MTE2a LTR MaLR 272 344 -35 9 794 248 260 20 59 chr17 27487224 27487326 -67785325 - MTEa LTR MaLR -174 205 108 9 794 355 309 35 65 chr17 27487248 27487449 -67785202 - MLT2B3 LTR ERVL -340 214 20 9 794 259 330 16 131 chr17 27487346 27487468 -67785183 - MTEa LTR MaLR -269 110 3 9 794 3078 50 176 0 chr17 27487917 27488321 -67784330 - IAPLTR2_Mm LTR ERVK 0 475 1 9 794 5347 57 13 20 chr17 27488323 27489033 -67783618 - IAPEz-int LTR ERVK -2 6479 5775 9 794 2930 19 0 0 chr17 27489033 27489393 -67783258 - IAPEz-int LTR ERVK -2121 4360 4001 9 794 6756 30 1 5 chr17 27489391 27490200 -67782451 - IAPEz-int LTR ERVK -3707 2774 1969 9 794 3977 52 0 2 chr17 27490194 27490691 -67781960 - IAPEz-int LTR ERVK -4627 1854 1359 9 794 3462 55 1 16 chr17 27490691 27491269 -67781382 - IAPEz-int LTR ERVK -5819 662 168 9 794 231 302 0 0 chr17 27491269 27491322 -67781329 - RLTR27 LTR ERVK -34 275 223 9 794 1005 121 25 85 chr17 27491322 27491521 -67781130 - IAPEz-int LTR ERVK -6286 195 9 9 794 2742 75 106 96 chr17 27491522 27491992 -67780659 - IAPLTR2_Mm LTR ERVK 0 475 1 9 794 221 288 62 0 chr17 27494951 27495031 -67777620 + MIRb SINE MIR 172 256 -12 9 794 630 0 0 0 chr17 27497475 27497545 -67775106 + (TC)n Simple_repeat Simple_repeat 2 71 0 9 794 201 129 0 0 chr17 27498971 27499002 -67773649 + (TG)n Simple_repeat Simple_repeat 1 31 0 9 794 478 282 7 26 chr17 27499311 27499464 -67773187 + Charlie18a DNA MER1_type 186 335 -7 9 794 184 0 0 88 chr17 27499545 27499579 -67773072 + (TGGGGG)n Simple_repeat Simple_repeat 3 33 0 9 794 1001 144 237 61 chr17 27499705 27500000 -67772651 - RMER4B LTR ERVK 0 585 239 9 794 1091 98 166 5 chr17 27500000 27500205 -67772446 - RMER4B LTR ERVK -347 238 1 1 794 296 334 0 18 chr17 27500424 27500557 -67772094 + ID2 SINE ID 8 135 -17 2 794 311 275 55 0 chr17 27500890 27500981 -67771670 - B1_Mus2 SINE Alu -51 96 1 3 794 379 238 0 0 chr17 27500908 27501000 -67771651 - ID_B1 SINE B4 -70 154 67 4 794 306 266 71 7 chr17 27501222 27501398 -67771253 + L1M4 LINE L1 5291 5478 -705 5 794 249 245 6 0 chr17 27501662 27501722 -67770929 - L1M5 LINE L1 -485 5677 5616 6 794 457 236 0 19 chr17 27501757 27501858 -67770793 + PB1D10 SINE Alu 4 103 -14 7 794 255 31 0 0 chr17 27501858 27501890 -67770761 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 8 794 196 375 0 0 chr17 27501936 27502000 -67770651 - L2b LINE L2 -230 3145 3082 9 794 438 239 114 29 chr17 27502546 27502721 -67769930 + Lx5 LINE L1 6759 6974 -84 1 794 564 15 0 0 chr17 27503667 27503732 -67768919 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 794 186 103 0 0 chr17 27503797 27503826 -67768825 + (TGGGGG)n Simple_repeat Simple_repeat 3 31 0 1 794 1840 92 0 18 chr17 27504204 27504480 -67768171 + ORR1A2 LTR MaLR 49 319 -8 1 794 266 235 267 12 chr17 27504558 27504644 -67768007 + PB1D10 SINE Alu 9 116 -1 1 794 285 286 43 0 chr17 27504681 27504751 -67767900 + B4A SINE B4 24 96 -196 1 794 521 275 131 6 chr17 27504754 27504937 -67767714 + B3 SINE B2 8 213 -3 1 794 1270 92 35 0 chr17 27504943 27505117 -67767534 + B2_Mm1t SINE B2 4 183 -10 1 794 262 144 0 7 chr17 27505175 27505229 -67767422 + B2_Mm2 SINE B2 58 109 -107 1 794 249 333 86 81 chr17 27505277 27505486 -67767165 + B4A SINE B4 82 291 -1 1 794 208 330 23 0 chr17 27505487 27505575 -67767076 + (CATATA)n Simple_repeat Simple_repeat 3 92 0 1 794 1668 175 72 23 chr17 27505609 27505694 -67766957 + ORR1D1 LTR MaLR 5 91 -283 2 794 4878 99 94 99 chr17 27505694 27506602 -67766049 + RMER17A2 LTR ERVK 4 906 0 2 794 1668 175 72 23 chr17 27506602 27506861 -67765790 + ORR1D1 LTR MaLR 92 366 -8 2 794 372 229 110 67 chr17 27507203 27507224 -67765427 - L1MC1 LINE L1 -475 5858 5836 2 794 778 223 241 27 chr17 27507224 27507252 -67765399 - ORR1E LTR MaLR 0 359 334 2 794 1125 96 0 0 chr17 27507252 27507398 -67765253 + B1_Mus1 SINE Alu 2 147 -1 2 794 251 28 0 27 chr17 27507399 27507436 -67765215 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 2 794 778 223 241 27 chr17 27507436 27507700 -67764951 - ORR1E LTR MaLR -26 333 4 2 794 372 229 110 67 chr17 27507700 27507786 -67764865 - L1MC1 LINE L1 -498 5835 5748 2 794 5081 110 49 70 chr17 27507786 27508712 -67763939 - RMER17A2 LTR ERVK 0 906 1 2 794 372 229 110 67 chr17 27508712 27508767 -67763884 - L1MC1 LINE L1 -586 5747 5689 2 794 269 359 75 70 chr17 27509033 27509246 -67763405 + LTR16A LTR ERVL 7 220 -231 2 794 212 348 102 8 chr17 27509748 27509909 -67762742 - L2b LINE L2 -1 3386 3219 2 794 691 203 7 0 chr17 27511172 27511310 -67761341 + B1_Mur2 SINE Alu 9 147 -2 2 794 318 198 57 0 chr17 27511317 27511423 -67761228 + (TA)n Simple_repeat Simple_repeat 2 113 0 3 794 1242 54 0 0 chr17 27511609 27511756 -67760895 + B1_Mus1 SINE Alu 1 147 -1 3 794 398 357 41 6 chr17 27513252 27513424 -67759227 - Tigger5 DNA MER2_type -2227 179 2 3 794 718 210 13 13 chr17 27513452 27513611 -67759040 - MTE2b LTR MaLR -6 373 215 3 794 1462 216 72 16 chr17 27513648 27514110 -67758541 - RMER19B LTR ERVK -448 454 1 3 794 694 219 49 0 chr17 27514226 27514390 -67758261 - B3 SINE B2 -11 205 34 3 794 607 303 50 5 chr17 27517016 27517215 -67755436 - MER58B DNA MER1_type -108 233 26 3 794 180 0 0 0 chr17 27517511 27517531 -67755120 + (A)n Simple_repeat Simple_repeat 1 20 0 3 794 252 0 0 0 chr17 27517597 27517625 -67755026 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 794 298 172 0 17 chr17 27517650 27517709 -67754942 - B1F1 SINE Alu -1 148 91 3 794 221 161 0 51 chr17 27517711 27517770 -67754881 + T-rich Low_complexity Low_complexity 1 56 0 4 794 1457 44 54 16 chr17 27517781 27517967 -67754684 - B2_Mm1a SINE B2 0 193 1 4 794 2346 192 69 99 chr17 27517991 27518859 -67753792 + RMER17B LTR ERVK 1 784 -174 4 794 544 258 83 26 chr17 27518851 27519075 -67753576 + RMER13B LTR ERVK 592 899 -9 4 794 560 105 20 40 chr17 27519087 27519186 -67753465 - B1_Mus2 SINE Alu -19 128 32 4 794 479 233 74 16 chr17 27519176 27519298 -67753353 - B1_Mur4 SINE Alu -16 134 6 4 794 3933 144 131 65 chr17 27519692 27520532 -67752119 - RMER19B LTR ERVK -7 895 1 4 794 204 260 40 27 chr17 27522446 27522521 -67750130 + MER91A DNA Tip100 80 155 -41 4 794 205 196 0 21 chr17 27522630 27522677 -67749974 + CT-rich Low_complexity Low_complexity 1 46 0 4 794 240 108 0 0 chr17 27523965 27524002 -67748649 - ID_B1 SINE B4 -2 222 186 4 794 580 288 107 16 chr17 27524002 27524189 -67748462 - ID_B1 SINE B4 -19 205 2 5 794 3841 51 12 116 chr17 27524196 27524767 -67747884 - RLTR1B LTR ERV1 0 512 1 5 794 263 270 183 39 chr17 27524881 27524985 -67747666 - PB1 SINE Alu -2 125 7 5 795 1528 219 37 6 chr17 27525238 27525587 -67747064 - ORR1D1 LTR MaLR -8 366 7 5 795 1748 222 45 15 chr17 27527243 27527705 -67744946 - RMER20A LTR ERVK -40 476 1 5 795 462 143 0 0 chr17 27527868 27527945 -67744706 + (CA)n Simple_repeat Simple_repeat 2 78 0 5 795 303 271 28 35 chr17 27528109 27528254 -67744397 + (TTAGGG)n Simple_repeat Simple_repeat 2 145 0 5 795 222 218 25 37 chr17 27528340 27528421 -67744230 + (TTAGGG)n Simple_repeat Simple_repeat 5 84 0 5 795 924 260 103 75 chr17 27528440 27528828 -67743823 - MTE2a LTR MaLR -15 404 10 5 795 187 103 0 49 chr17 27528860 27528901 -67743750 + (TTAGGG)n Simple_repeat Simple_repeat 6 44 0 5 795 572 295 24 49 chr17 27529558 27529722 -67742929 + RSINE1 SINE B4 2 161 -4 6 795 224 326 73 10 chr17 27529989 27530085 -67742566 + L2 LINE L2 2762 2863 -556 6 795 1122 184 29 10 chr17 27530497 27530687 -67741964 + B3 SINE B2 5 200 -16 6 795 342 0 0 0 chr17 27530687 27530725 -67741926 + (CATA)n Simple_repeat Simple_repeat 4 41 0 6 795 1122 184 29 10 chr17 27530725 27530742 -67741909 + B3 SINE B2 201 216 0 6 795 672 232 29 0 chr17 27531776 27531914 -67740737 + B1_Mur4 SINE Alu 9 150 0 6 795 272 312 71 84 chr17 27531782 27531936 -67740715 + B4A SINE B4 99 250 -42 6 795 371 328 61 58 chr17 27532037 27532162 -67740489 + L1MC LINE L1 4579 4701 -1445 6 795 377 295 57 0 chr17 27532162 27532267 -67740384 + PB1D9 SINE Alu 3 113 -7 6 795 371 335 67 57 chr17 27532267 27532525 -67740126 + L1MC LINE L1 4702 4982 -1164 6 795 583 259 7 20 chr17 27532567 27532717 -67739934 + RSINE1 SINE B4 4 151 -14 6 795 700 175 40 0 chr17 27532908 27533034 -67739617 - B1F2 SINE Alu -18 131 1 6 795 270 334 136 3 chr17 27533213 27533420 -67739231 + L1MD2 LINE L1 5795 6018 -224 7 795 233 342 89 0 chr17 27534293 27534372 -67738279 - B1F1 SINE Alu -59 90 5 7 795 331 354 18 48 chr17 27534871 27535037 -67737614 - RMER4A LTR ERVK -298 168 8 7 795 214 344 89 30 chr17 27535160 27535295 -67737356 - L2a LINE L2 -8 3418 3276 7 795 575 233 13 26 chr17 27536503 27536657 -67735994 + ZP3AR Satellite Satellite 44 195 -17 7 795 233 296 65 54 chr17 27537042 27537135 -67735516 - L3 LINE CR1 -114 4375 4282 7 795 320 236 35 62 chr17 27537197 27537310 -67735341 + ID_B1 SINE B4 27 136 -88 7 795 324 292 106 73 chr17 27537291 27537577 -67735074 + RLTR12B LTR ERVK 168 480 -48 7 795 1026 227 15 5 chr17 27537715 27537919 -67734732 + B3 SINE B2 1 206 -10 7 795 473 281 152 16 chr17 27538921 27539178 -67733473 + LTR16E1 LTR ERVL 241 532 -6 7 795 879 291 172 66 chr17 27539432 27540083 -67732568 + RMER13A LTR ERVK 98 817 -43 8 795 403 325 25 38 chr17 27541371 27541528 -67731123 + ID_B1 SINE B4 2 156 -68 8 795 754 219 0 0 chr17 27541560 27541697 -67730954 + B1_Mur1 SINE Alu 5 141 -8 8 795 983 204 61 10 chr17 27541795 27541993 -67730658 + B3 SINE B2 9 216 0 8 795 264 241 111 49 chr17 27541973 27542111 -67730540 - Charlie1a DNA MER1_type -105 1350 1204 8 795 1133 241 57 33 chr17 27542111 27542445 -67730206 + MTEb LTR MaLR 2 343 -36 8 795 503 230 31 8 chr17 27542479 27542606 -67730045 - Charlie1a DNA MER1_type -260 1195 1066 8 795 488 328 76 0 chr17 27542798 27542996 -67729655 - Charlie1a DNA MER1_type -738 717 505 8 795 330 26 0 0 chr17 27542999 27543038 -67729613 + (TG)n Simple_repeat Simple_repeat 1 39 0 8 795 591 318 0 0 chr17 27543070 27543218 -67729433 - RSINE1 SINE B4 -16 149 2 8 795 297 153 12 143 chr17 27543381 27543465 -67729186 + ORR1D2 LTR MaLR 287 359 -11 8 795 581 306 31 96 chr17 27544691 27545231 -67727420 + RLTR12B LTR ERVK 17 506 -62 8 795 245 54 27 0 chr17 27545359 27545396 -67727255 + RMER5 LTR ERV1 70 107 -427 9 795 412 261 52 0 chr17 27545418 27545533 -67727118 + RMER5 LTR ERV1 414 534 0 9 795 3190 53 5 15 chr17 27546264 27546664 -67725987 - MTA_Mm LTR MaLR 0 396 1 9 795 414 0 0 0 chr17 27546778 27546824 -67725827 + (TG)n Simple_repeat Simple_repeat 1 46 0 9 795 431 321 22 22 chr17 27546844 27546981 -67725670 - RSINE1 SINE B4 -18 147 11 9 795 269 289 24 12 chr17 27546938 27547022 -67725629 + B4A SINE B4 147 231 -61 9 795 773 232 0 19 chr17 27547026 27547184 -67725467 + RSINE1 SINE B4 11 165 0 9 795 365 98 16 0 chr17 27547654 27547715 -67724936 + B1_Mus2 SINE Alu 86 147 0 9 795 257 254 84 0 chr17 27548174 27548245 -67724406 - MTEa LTR MaLR -237 142 66 9 795 240 270 20 101 chr17 27548250 27548349 -67724302 - MTEa LTR MaLR -288 91 1 9 795 252 0 0 0 chr17 27549163 27549191 -67723460 + (CA)n Simple_repeat Simple_repeat 1 28 0 9 795 419 286 40 67 chr17 27550088 27550238 -67722413 + B1F SINE Alu 4 149 0 1 795 302 327 97 32 chr17 27550263 27550418 -67722233 + RSINE1 SINE B4 1 165 0 1 795 204 125 0 0 chr17 27550534 27550566 -67722085 + (GGAA)n Simple_repeat Simple_repeat 4 35 0 1 795 292 274 0 0 chr17 27550571 27550644 -67722007 + L1M5 LINE L1 4506 4578 -1568 1 795 395 277 9 9 chr17 27550644 27550757 -67721894 + PB1D9 SINE Alu 1 113 -7 1 795 1193 48 0 7 chr17 27550768 27550915 -67721736 + B1_Mm SINE Alu 2 147 0 1 795 216 86 0 0 chr17 27550915 27550950 -67721701 + (A)n Simple_repeat Simple_repeat 1 35 0 1 795 360 255 149 32 chr17 27551155 27551309 -67721342 + ID_B1 SINE B4 47 218 -6 1 795 2743 108 43 51 chr17 27552982 27553450 -67719201 - RMER4A LTR ERVK 0 466 3 1 795 224 208 0 47 chr17 27553454 27553560 -67719091 + (TG)n Simple_repeat Simple_repeat 1 101 0 1 795 296 103 17 0 chr17 27553562 27553620 -67719031 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 1 795 267 242 0 0 chr17 27553660 27553780 -67718871 + (TG)n Simple_repeat Simple_repeat 2 121 0 1 795 218 287 11 11 chr17 27553847 27553935 -67718716 + C-rich Low_complexity Low_complexity 3 90 0 1 795 792 221 20 20 chr17 27554262 27554414 -67718237 + RSINE1 SINE B4 2 153 -12 1 795 183 106 41 41 chr17 27554424 27554473 -67718178 + GA-rich Low_complexity Low_complexity 5 53 0 1 795 276 100 0 0 chr17 27554571 27554611 -67718040 + (CAT)n Simple_repeat Simple_repeat 2 41 0 1 795 452 254 9 62 chr17 27554708 27554875 -67717776 - L1MEd LINE L1 -5062 1057 920 1 795 923 279 47 111 chr17 27554887 27555248 -67717403 + MTEb LTR MaLR 2 342 -37 1 795 1472 143 80 176 chr17 27555248 27555461 -67717190 + ORR1C2 LTR MaLR 1 185 -199 1 795 357 24 0 0 chr17 27555461 27555503 -67717148 + (TC)n Simple_repeat Simple_repeat 2 43 0 1 795 1472 143 80 176 chr17 27555503 27555714 -67716937 + ORR1C2 LTR MaLR 186 384 0 1 795 923 279 47 111 chr17 27555714 27555756 -67716895 + MTEb LTR MaLR 343 379 0 1 795 1059 186 75 10 chr17 27555877 27556078 -67716573 - B3 SINE B2 -2 214 1 1 795 617 279 63 16 chr17 27556111 27556300 -67716351 - B3A SINE B2 0 198 1 1 795 348 247 12 0 chr17 27556310 27556391 -67716260 - ID_B1 SINE B4 -6 218 137 1 795 197 128 24 49 chr17 27556715 27556756 -67715895 - L2b LINE L2 -65 3310 3271 1 795 279 219 48 12 chr17 27557264 27557347 -67715304 + ID_B1 SINE B4 136 221 -3 1 795 216 161 32 16 chr17 27557347 27557410 -67715241 + (CAGA)n Simple_repeat Simple_repeat 1 64 0 1 795 269 310 66 52 chr17 27557522 27557720 -67714931 + L1MEc LINE L1 1158 1365 -5035 1 795 454 176 132 37 chr17 27557720 27557856 -67714795 + RSINE1 SINE B4 3 151 -14 1 795 269 310 66 52 chr17 27557856 27557943 -67714708 + L1MEc LINE L1 1366 1447 -4953 1 795 723 229 42 0 chr17 27558192 27558336 -67714315 + RSINE1 SINE B4 2 151 -14 1 795 465 293 43 0 chr17 27558735 27558875 -67713776 - MIR3 SINE MIR -38 170 25 1 795 711 52 0 0 chr17 27559157 27559253 -67713398 + (CA)n Simple_repeat Simple_repeat 1 96 0 1 795 232 276 26 26 chr17 27560999 27561077 -67711574 + ID4_ SINE ID 1 78 -5 1 795 387 41 0 0 chr17 27562494 27562543 -67710108 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 795 360 195 133 0 chr17 27562555 27562661 -67709990 - B3A SINE B2 -70 125 1 1 795 316 301 43 0 chr17 27564936 27565029 -67707622 + MLT1J LTR MaLR 77 173 -339 1 795 980 265 125 23 chr17 27565061 27565412 -67707239 + MTD LTR MaLR 31 417 -2 1 795 209 163 47 0 chr17 27566869 27566912 -67705739 + C-rich Low_complexity Low_complexity 1 45 0 1 795 226 225 0 0 chr17 27567225 27567265 -67705386 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 795 21 0 0 0 chr17 27568221 27568242 -67704409 + GC_rich Low_complexity Low_complexity 1 21 0 1 795 296 269 134 0 chr17 27568742 27568876 -67703775 + MIRc SINE MIR 33 184 -84 1 795 564 15 0 0 chr17 27573193 27573258 -67699393 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 795 649 211 2 0 chr17 27573259 27573695 -67698956 + (TG)n Simple_repeat Simple_repeat 1 437 0 1 795 525 188 11 23 chr17 27573697 27573871 -67698780 + (TCTG)n Simple_repeat Simple_repeat 3 174 0 1 795 189 0 0 0 chr17 27575971 27575992 -67696659 + (CACTC)n Simple_repeat Simple_repeat 3 23 0 1 795 182 244 67 0 chr17 27577230 27577275 -67695376 - L2b LINE L2 -16 3359 3312 1 795 271 244 213 37 chr17 27577414 27577550 -67695101 - B3 SINE B2 -32 184 25 1 795 290 226 19 123 chr17 27577569 27577634 -67695017 - RSINE1 SINE B4 -8 157 94 1 795 1333 91 27 0 chr17 27577634 27577820 -67694831 + B2_Mm2 SINE B2 3 193 -2 1 795 290 226 19 123 chr17 27577820 27577860 -67694791 - RSINE1 SINE B4 -72 93 63 1 795 354 107 0 0 chr17 27579943 27579999 -67692652 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 795 403 308 0 8 chr17 27580216 27580334 -67692317 - PB1D7 SINE Alu -2 118 2 1 795 366 321 75 71 chr17 27580909 27581191 -67691460 + L2a LINE L2 2929 3211 -215 1 795 197 59 0 56 chr17 27581205 27581241 -67691410 + (CCCCCA)n Simple_repeat Simple_repeat 2 35 0 1 795 260 172 17 0 chr17 27581345 27581403 -67691248 + CT-rich Low_complexity Low_complexity 1 59 0 1 795 324 264 0 0 chr17 27581411 27581536 -67691115 + (TG)n Simple_repeat Simple_repeat 2 126 0 1 795 747 161 0 0 chr17 27581552 27581732 -67690919 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 795 1158 219 47 70 chr17 27581738 27582037 -67690614 - B4 SINE B4 0 292 1 1 795 553 154 30 0 chr17 27582239 27582351 -67690300 + MIRb SINE MIR 21 151 -117 1 795 209 281 53 0 chr17 27582910 27582967 -67689684 - MIRb SINE MIR -160 108 49 1 795 185 138 0 0 chr17 27583688 27583717 -67688934 + MIRc SINE MIR 120 148 -120 1 795 446 223 43 26 chr17 27584077 27584192 -67688459 + PB1D7 SINE Alu 3 119 -1 1 795 473 267 52 7 chr17 27584204 27584340 -67688311 + ID_B1 SINE B4 81 222 -2 1 795 538 295 115 43 chr17 27585100 27585295 -67687356 - B4 SINE B4 -6 286 71 1 795 838 262 18 50 chr17 27585295 27585516 -67687135 - B3 SINE B2 -1 215 2 1 795 538 295 115 43 chr17 27585516 27585554 -67687097 - B4 SINE B4 -222 70 36 1 795 366 306 139 0 chr17 27586272 27586445 -67686206 + L2a LINE L2 3190 3386 -40 1 795 1033 122 14 0 chr17 27587861 27588008 -67684643 + B1_Mur2 SINE Alu 1 149 0 1 795 325 355 21 21 chr17 27591775 27591919 -67680732 + MIR SINE MIR 36 179 -83 1 795 225 233 160 28 chr17 27592444 27592550 -67680101 - RMER21B LTR ERV1 -46 796 677 1 795 581 97 66 12 chr17 27592653 27592820 -67679831 + (CA)n Simple_repeat Simple_repeat 1 176 0 1 795 506 123 65 9 chr17 27592852 27593193 -67679458 + (CA)n Simple_repeat Simple_repeat 1 360 0 1 795 221 311 38 63 chr17 27593774 27593947 -67678704 - MIRb SINE MIR -67 201 23 1 795 267 321 94 31 chr17 27594212 27594448 -67678203 - MIRb SINE MIR -6 262 10 1 795 207 256 0 0 chr17 27594601 27594640 -67678011 + (CACG)n Simple_repeat Simple_repeat 2 40 0 1 795 261 290 11 11 chr17 27595226 27595404 -67677247 + CT-rich Low_complexity Low_complexity 1 178 0 1 795 405 250 0 0 chr17 27595695 27595819 -67676832 + (CA)n Simple_repeat Simple_repeat 1 124 0 1 795 3581 18 2 0 chr17 27598038 27598432 -67674219 + MTA_Mm LTR MaLR 2 396 0 1 795 9726 24 0 0 chr17 27598432 27599530 -67673121 + MTA_Mm-int LTR MaLR 1 1098 0 1 795 3493 33 2 0 chr17 27599530 27599925 -67672726 + MTA_Mm LTR MaLR 1 396 0 1 795 245 279 116 0 chr17 27600701 27600787 -67671864 + MIRc SINE MIR 21 116 -152 1 795 301 215 0 81 chr17 27600844 27600930 -67671721 + PB1D10 SINE Alu 38 116 -1 1 795 210 315 20 92 chr17 27601031 27601129 -67671522 + L2c LINE L2 3293 3383 -4 1 795 228 348 43 0 chr17 27602618 27602710 -67669941 - MIRb SINE MIR -49 219 124 1 795 287 203 0 14 chr17 27602759 27602829 -67669822 + CT-rich Low_complexity Low_complexity 1 69 0 1 795 234 128 0 0 chr17 27603503 27603542 -67669109 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 795 198 0 0 0 chr17 27603794 27603816 -67668835 + (GGCTG)n Simple_repeat Simple_repeat 2 23 0 1 795 599 39 13 0 chr17 27603927 27604005 -67668646 + (TATATG)n Simple_repeat Simple_repeat 5 83 0 1 795 414 209 11 34 chr17 27604009 27604187 -67668464 + (TATG)n Simple_repeat Simple_repeat 2 175 0 1 795 413 194 23 11 chr17 27604188 27604457 -67668194 + (TG)n Simple_repeat Simple_repeat 1 272 0 1 795 539 178 20 31 chr17 27604469 27604725 -67667926 + (TG)n Simple_repeat Simple_repeat 1 253 0 1 795 216 213 21 0 chr17 27604841 27604888 -67667763 + CT-rich Low_complexity Low_complexity 2 49 0 1 795 564 116 0 0 chr17 27604890 27604976 -67667675 + (CA)n Simple_repeat Simple_repeat 2 87 0 1 795 510 269 0 0 chr17 27606276 27606631 -67666020 + (CA)n Simple_repeat Simple_repeat 1 355 0 1 795 198 143 0 0 chr17 27606646 27606681 -67665970 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 795 183 42 0 0 chr17 27607550 27607574 -67665077 + (TGGGGG)n Simple_repeat Simple_repeat 5 28 0 1 795 249 109 0 52 chr17 27608087 27608145 -67664506 + C-rich Low_complexity Low_complexity 1 55 0 1 795 276 331 103 0 chr17 27610882 27611027 -67661624 - MER20 DNA MER1_type -59 160 1 1 795 668 159 0 18 chr17 27611059 27611168 -67661483 + PB1D9 SINE Alu 1 107 -13 1 795 511 239 25 8 chr17 27612909 27613027 -67659624 + PB1D9 SINE Alu 1 120 0 1 795 288 288 122 14 chr17 27613027 27613054 -67659597 + B4A SINE B4 86 246 -46 1 795 315 161 0 0 chr17 27613054 27613110 -67659541 + GA-rich Low_complexity Low_complexity 1 56 0 1 795 387 370 138 3 chr17 27614323 27614627 -67658024 + MLT1I LTR MaLR 67 411 0 1 795 349 338 55 0 chr17 27614963 27615108 -67657543 - MIR SINE MIR -107 155 3 1 795 397 234 129 62 chr17 27615161 27615186 -67657465 + B4 SINE B4 72 94 -198 1 795 943 250 14 9 chr17 27615186 27615396 -67657255 + B3 SINE B2 1 211 -5 1 795 592 186 0 34 chr17 27615399 27615516 -67657135 + PB1D9 SINE Alu 8 120 0 1 795 397 230 130 61 chr17 27615516 27615532 -67657119 + B4 SINE B4 96 240 -52 1 795 1285 158 40 254 chr17 27616093 27616335 -67656316 - ORR1D1 LTR MaLR 0 374 154 1 795 740 90 205 0 chr17 27616335 27616457 -67656194 - B1_Mus2 SINE Alu 0 147 1 1 795 1285 158 40 254 chr17 27616457 27616690 -67655961 - ORR1D1 LTR MaLR -221 153 1 1 795 674 133 53 0 chr17 27616734 27616847 -67655804 + B1_Mur4 SINE Alu 19 137 -13 2 795 213 381 55 9 chr17 27616953 27617170 -67655481 + L2a LINE L2 2936 3162 -264 2 795 188 256 0 0 chr17 27617957 27617996 -67654655 + MIRb SINE MIR 122 160 -108 2 795 351 0 0 0 chr17 27618429 27618468 -67654183 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 795 190 252 319 9 chr17 27618469 27618585 -67654066 - MIRb SINE MIR -67 201 50 2 795 378 0 0 0 chr17 27619046 27619088 -67653563 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 795 195 100 0 0 chr17 27619522 27619552 -67653099 + (CACCC)n Simple_repeat Simple_repeat 3 32 0 2 795 195 139 0 0 chr17 27619785 27619821 -67652830 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 795 517 328 0 0 chr17 27620189 27620320 -67652331 + RSINE1 SINE B4 2 132 -33 2 795 258 32 0 0 chr17 27621382 27621413 -67651238 + (G)n Simple_repeat Simple_repeat 1 31 0 2 795 307 234 117 0 chr17 27621542 27621619 -67651032 + PB1D10 SINE Alu 32 117 0 2 795 284 231 31 14 chr17 27621624 27621701 -67650950 + ID2 SINE ID 12 90 -62 2 795 270 56 0 0 chr17 27622928 27622964 -67649687 + (CAG)n Simple_repeat Simple_repeat 3 38 0 2 795 373 277 30 0 chr17 27623614 27623715 -67648936 + PB1D10 SINE Alu 14 117 0 2 795 1085 83 160 6 chr17 27623729 27623898 -67648753 + B2_Mm2 SINE B2 1 195 0 2 795 304 162 38 31 chr17 27623944 27624038 -67648613 + B1F SINE Alu 14 137 -12 2 795 357 24 0 0 chr17 27624038 27624080 -67648571 + (GAAA)n Simple_repeat Simple_repeat 4 45 0 2 795 501 17 0 0 chr17 27624080 27624137 -67648514 + (GGGA)n Simple_repeat Simple_repeat 2 59 0 2 795 404 277 153 50 chr17 27624145 27624407 -67648244 + B4A SINE B4 2 290 -2 2 795 229 258 15 0 chr17 27624644 27624710 -67647941 + L2 LINE L2 3001 3067 -352 2 795 405 0 0 0 chr17 27625333 27625378 -67647273 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 795 371 225 12 12 chr17 27626185 27626266 -67646385 - ID4_ SINE ID -2 81 1 2 795 466 309 209 9 chr17 27626671 27626905 -67645746 - B4A SINE B4 -4 288 8 2 795 627 14 0 0 chr17 27627428 27627500 -67645151 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 795 511 254 139 53 chr17 27628225 27628412 -67644239 - B3 SINE B2 -5 211 9 2 795 393 109 0 0 chr17 27628418 27628482 -67644169 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 795 298 279 29 0 chr17 27628484 27628552 -67644099 - B4A SINE B4 -4 288 219 2 795 766 238 130 0 chr17 27628574 27628605 -67644046 - B3 SINE B2 0 216 170 2 795 236 30 30 0 chr17 27628605 27628638 -67644013 + (TATG)n Simple_repeat Simple_repeat 2 35 0 2 795 766 238 130 0 chr17 27628638 27628791 -67643860 - B3 SINE B2 -47 169 9 2 795 600 253 7 46 chr17 27628799 27628952 -67643699 - B4A SINE B4 -63 229 83 2 795 249 378 96 18 chr17 27629046 27629213 -67643438 + MIRc SINE MIR 30 209 -59 2 795 737 265 101 10 chr17 27629215 27629413 -67643238 + ID_B1 SINE B4 3 218 -6 2 795 667 197 96 22 chr17 27629418 27629553 -67643098 + B1_Mm SINE Alu 3 147 0 2 795 245 203 250 0 chr17 27629656 27629720 -67642931 + B4A SINE B4 2 81 -211 2 795 326 270 84 38 chr17 27629810 27629941 -67642710 + B3A SINE B2 61 197 -1 2 795 1433 71 16 0 chr17 27629955 27630137 -67642514 + B2_Mm2 SINE B2 3 187 -8 2 795 485 202 305 24 chr17 27630149 27630316 -67642335 + B3 SINE B2 3 216 0 2 795 556 165 0 0 chr17 27631577 27631668 -67640983 + B1_Mur4 SINE Alu 43 133 -17 2 795 378 0 0 0 chr17 27631684 27631726 -67640925 + (GA)n Simple_repeat Simple_repeat 1 42 0 2 795 288 0 0 0 chr17 27633465 27633497 -67639154 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 795 656 233 78 20 chr17 27633647 27633800 -67638851 - RSINE1 SINE B4 -1 164 3 2 795 434 263 64 69 chr17 27633812 27633853 -67638798 - B2_Mm2 SINE B2 -8 187 138 2 795 342 0 0 0 chr17 27633853 27633891 -67638760 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 795 773 212 7 0 chr17 27633891 27634037 -67638614 - B3A SINE B2 -51 147 1 2 795 312 238 57 45 chr17 27634046 27634134 -67638517 + RMER30 DNA MER1_type 114 202 0 2 795 413 233 7 141 chr17 27634351 27634401 -67638250 + PB1D9 SINE Alu 4 46 -74 2 795 1429 81 22 0 chr17 27634401 27634586 -67638065 + B2_Mm2 SINE B2 1 189 -6 2 795 413 233 7 141 chr17 27634586 27634670 -67637981 + PB1D9 SINE Alu 47 120 0 2 795 456 86 0 0 chr17 27634670 27634740 -67637911 + (GA)n Simple_repeat Simple_repeat 1 70 0 2 795 268 364 140 11 chr17 27634740 27635004 -67637647 - L2 LINE L2 -337 3082 2785 2 795 1271 206 91 89 chr17 27635096 27635149 -67637502 - MTD LTR MaLR -11 408 354 2 795 261 0 0 0 chr17 27635149 27635178 -67637473 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 2 795 1271 206 91 89 chr17 27635178 27635519 -67637132 - MTD LTR MaLR -66 353 13 2 795 560 185 109 11 chr17 27635542 27635685 -67636966 + ID_B1 SINE B4 96 248 -44 2 795 207 301 90 56 chr17 27636306 27636450 -67636201 - MIRb SINE MIR -14 254 106 2 795 21 0 0 0 chr17 27637147 27637168 -67635483 + GC_rich Low_complexity Low_complexity 1 21 0 2 795 456 19 0 0 chr17 27637284 27637337 -67635314 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 795 238 283 0 0 chr17 27638262 27638315 -67634336 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 795 396 0 0 0 chr17 27638606 27638650 -67634001 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 795 278 300 9 43 chr17 27638916 27639031 -67633620 + G-rich Low_complexity Low_complexity 4 114 0 2 795 285 253 12 12 chr17 27638917 27638997 -67633654 + GA-rich Low_complexity Low_complexity 1 80 0 2 795 188 214 18 0 chr17 27639284 27639340 -67633311 + (TCTG)n Simple_repeat Simple_repeat 2 58 0 2 795 1000 46 33 0 chr17 27640484 27640635 -67632016 + (GA)n Simple_repeat Simple_repeat 1 156 0 2 795 191 245 19 56 chr17 27641608 27641667 -67630984 + MIR SINE MIR 95 158 -118 2 795 319 247 0 13 chr17 27641847 27641925 -67630726 - ID4_ SINE ID -5 78 2 2 795 214 304 135 71 chr17 27645356 27645622 -67627029 - L2a LINE L2 -95 3280 2998 2 795 348 251 270 0 chr17 27647136 27647299 -67625352 - B4A SINE B4 -42 250 44 2 795 21 0 0 0 chr17 27649020 27649041 -67623610 + GC_rich Low_complexity Low_complexity 1 21 0 2 795 25 51 0 0 chr17 27649873 27649912 -67622739 + GC_rich Low_complexity Low_complexity 1 39 0 2 795 237 132 0 0 chr17 27650016 27650054 -67622597 + (CCG)n Simple_repeat Simple_repeat 3 40 0 2 795 23 97 0 0 chr17 27650209 27650281 -67622370 + GC_rich Low_complexity Low_complexity 1 72 0 2 795 219 174 22 0 chr17 27650820 27650866 -67621785 - MIRm SINE MIR -140 136 90 2 795 226 299 39 0 chr17 27651477 27651554 -67621097 + L2b LINE L2 3294 3373 -2 2 795 208 269 29 43 chr17 27652668 27652738 -67619913 - L3b LINE CR1 -193 289 221 2 795 392 247 0 118 chr17 27652924 27653034 -67619617 - B1F1 SINE Alu -21 128 32 2 795 270 260 26 0 chr17 27653053 27653130 -67619521 - PB1D10 SINE Alu -20 97 19 2 795 538 260 60 0 chr17 27653065 27653215 -67619436 - ID_B1 SINE B4 -58 166 8 2 795 255 298 0 0 chr17 27653243 27653300 -67619351 - ID4_ SINE ID -2 81 25 2 795 923 108 0 28 chr17 27653336 27653348 -67619303 - B1_Mus1 SINE Alu 0 148 140 2 795 608 48 0 24 chr17 27653348 27653433 -67619218 + (GTTTG)n Simple_repeat Simple_repeat 2 84 0 2 795 923 108 0 28 chr17 27653433 27653563 -67619088 - B1_Mus1 SINE Alu -9 139 10 2 795 850 199 18 6 chr17 27653573 27653740 -67618911 + B3 SINE B2 38 206 -10 2 795 295 184 200 33 chr17 27653772 27653862 -67618789 - RSINE1 SINE B4 -57 108 4 2 796 262 160 88 25 chr17 27657005 27657073 -67615578 + PB1D7 SINE Alu 52 126 -1 2 796 187 309 119 0 chr17 27658118 27658202 -67614449 + MER5B DNA MER1_type 8 101 -77 2 796 651 299 29 127 chr17 27658220 27658671 -67613980 + MTD LTR MaLR 13 403 -16 2 796 1026 67 0 0 chr17 27658984 27659119 -67613532 - B1_Mus1 SINE Alu -8 140 6 2 796 237 300 0 0 chr17 27659185 27659245 -67613406 - PB1D9 SINE Alu -2 118 59 2 796 254 185 37 12 chr17 27659836 27659918 -67612733 + GA-rich Low_complexity Low_complexity 3 86 0 2 796 386 264 58 97 chr17 27660492 27660523 -67612128 + B4 SINE B4 67 215 -77 2 796 872 81 16 0 chr17 27660523 27660647 -67612004 + B1_Mur4 SINE Alu 14 139 -11 2 796 360 0 0 0 chr17 27660650 27660690 -67611961 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 796 338 47 0 0 chr17 27660690 27660733 -67611918 + B1_Mur2 SINE Alu 96 138 -11 2 796 207 0 0 0 chr17 27660734 27660757 -67611894 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 796 236 262 248 19 chr17 27660764 27660869 -67611782 + ID_B1 SINE B4 1 129 -95 2 796 1250 48 0 0 chr17 27660947 27661094 -67611557 + B1_Mus1 SINE Alu 2 148 0 2 796 207 100 0 0 chr17 27661098 27661128 -67611523 + (GA)n Simple_repeat Simple_repeat 2 31 0 2 796 204 97 0 0 chr17 27661128 27661159 -67611492 + (GAAAA)n Simple_repeat Simple_repeat 1 31 0 2 796 306 294 11 11 chr17 27661317 27661410 -67611241 + MTE2b LTR MaLR 264 356 -23 2 796 942 195 0 31 chr17 27661600 27661796 -67610855 - B3 SINE B2 -4 212 23 2 796 1236 55 0 0 chr17 27661843 27661989 -67610662 - B1_Mus2 SINE Alu 0 147 2 2 796 1709 21 0 0 chr17 27662022 27662214 -67610437 - B2_Mm1a SINE B2 0 193 2 2 796 4634 132 88 9 chr17 27662214 27663023 -67609628 - RMER19B LTR ERVK -29 873 1 2 796 351 250 100 0 chr17 27663030 27663130 -67609521 - PB1D9 SINE Alu -5 115 6 2 796 1285 68 102 6 chr17 27663151 27663309 -67609342 + B2_Mm2 SINE B2 2 177 -18 3 796 315 0 0 0 chr17 27663309 27663344 -67609307 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 3 796 1285 68 102 6 chr17 27663344 27663362 -67609289 + B2_Mm2 SINE B2 178 195 0 3 796 559 316 61 14 chr17 27663443 27663655 -67608996 + B4A SINE B4 11 232 -60 3 796 1432 52 0 17 chr17 27663655 27663833 -67608818 + B2_Mm2 SINE B2 2 176 -19 3 796 241 151 18 70 chr17 27663844 27663901 -67608750 + B1F2 SINE Alu 1 54 -95 3 796 1105 83 0 14 chr17 27663901 27664047 -67608604 + B1_Mus2 SINE Alu 2 145 -2 3 796 270 262 132 46 chr17 27664320 27664472 -67608179 + MLT1G3 LTR MaLR 247 411 -184 3 796 203 300 0 0 chr17 27664664 27664714 -67607937 + (CGTG)n Simple_repeat Simple_repeat 1 50 0 3 796 239 270 13 26 chr17 27665442 27665518 -67607133 + GA-rich Low_complexity Low_complexity 2 76 0 3 796 216 262 139 66 chr17 27665640 27665660 -67606991 + B4 SINE B4 71 112 -180 3 796 325 179 179 0 chr17 27665660 27665738 -67606913 + B1_Mur3 SINE Alu 1 92 -57 3 796 216 262 139 66 chr17 27665738 27665791 -67606860 + B4 SINE B4 113 232 -60 3 796 347 252 87 39 chr17 27666316 27666419 -67606232 + B3A SINE B2 43 150 -48 3 796 1138 77 4 239 chr17 27666448 27666552 -67606099 + B2_Mm2 SINE B2 1 104 -91 3 796 1288 34 0 0 chr17 27666552 27666699 -67605952 + B1_Mm SINE Alu 1 147 0 3 796 1138 77 4 239 chr17 27666699 27666849 -67605802 + B2_Mm2 SINE B2 105 195 0 3 796 189 0 0 0 chr17 27667402 27667423 -67605228 + (A)n Simple_repeat Simple_repeat 1 21 0 3 796 286 242 94 35 chr17 27667859 27667976 -67604675 - MIR SINE MIR -106 156 44 3 796 1056 199 62 0 chr17 27668260 27668471 -67604180 - ID_B1 SINE B4 0 224 1 3 796 794 181 8 0 chr17 27668513 27668646 -67604005 + B1_Mur1 SINE Alu 1 134 -15 3 796 3808 148 113 83 chr17 27668646 27669503 -67603148 + RMER19B LTR ERVK 1 883 -19 3 796 1722 26 0 0 chr17 27669506 27669699 -67602952 + B2_Mm1a SINE B2 1 193 0 3 796 1062 87 7 0 chr17 27669760 27669898 -67602753 + B1_Mus1 SINE Alu 5 143 -5 3 796 50 0 0 0 chr17 27669898 27669948 -67602703 + AT_rich Low_complexity Low_complexity 1 50 0 3 796 985 160 101 50 chr17 27670196 27670230 -67602421 + B3 SINE B2 2 36 -180 3 796 1191 37 0 0 chr17 27670230 27670366 -67602285 + B1_Mus2 SINE Alu 2 137 -10 3 796 213 39 0 0 chr17 27670366 27670392 -67602259 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 3 796 985 160 101 50 chr17 27670392 27670554 -67602097 + B3 SINE B2 37 208 -8 3 796 1676 115 99 236 chr17 27670898 27671278 -67601373 - RLTR11B LTR ERVK 0 453 135 3 796 1347 81 32 0 chr17 27671278 27671463 -67601188 + B2_Mm1t SINE B2 3 193 0 3 796 1676 115 99 236 chr17 27671463 27671475 -67601176 - RLTR11B LTR ERVK -319 134 134 3 796 1134 38 8 0 chr17 27671475 27671608 -67601043 - B1_Mus2 SINE Alu -13 134 1 3 796 1676 115 99 236 chr17 27671608 27671739 -67600912 - RLTR11B LTR ERVK -319 134 1 3 796 214 260 0 0 chr17 27672245 27672294 -67600357 + MIRc SINE MIR 75 123 -139 3 796 456 214 170 0 chr17 27672303 27672415 -67600236 + RSINE1 SINE B4 27 157 -8 3 796 414 198 70 35 chr17 27672436 27672551 -67600100 - B3 SINE B2 -3 213 95 3 796 1084 73 7 0 chr17 27672571 27672708 -67599943 + B1_Mus1 SINE Alu 2 139 -9 3 796 978 88 0 20 chr17 27672743 27672894 -67599757 + B2_Mm2 SINE B2 46 193 -2 3 796 1518 27 0 0 chr17 27672913 27673405 -67599246 + (GAA)n Simple_repeat Simple_repeat 1 492 0 3 796 312 309 20 10 chr17 27673405 27673503 -67599148 + B4A SINE B4 82 180 -112 3 796 519 208 29 16 chr17 27673416 27673554 -67599097 + PB1D9 SINE Alu 10 139 -11 3 796 415 326 20 20 chr17 27674070 27674220 -67598431 + B3A SINE B2 25 174 -24 3 796 525 32 0 0 chr17 27674258 27674321 -67598330 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 3 796 1168 45 0 0 chr17 27674323 27674457 -67598194 - B1_Mus1 SINE Alu -13 135 2 3 796 353 382 40 0 chr17 27674621 27674773 -67597878 + MER97c DNA MER1_type? 172 329 -761 3 796 405 0 0 0 chr17 27674841 27674886 -67597765 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 796 404 239 13 36 chr17 27675132 27675246 -67597405 + B1F SINE Alu 10 119 -30 3 796 1090 76 14 0 chr17 27675246 27675390 -67597261 + B1_Mus1 SINE Alu 2 147 -1 3 796 311 271 30 106 chr17 27675390 27675423 -67597228 + B1_Mur2 SINE Alu 120 148 -1 3 796 318 278 33 0 chr17 27675440 27675530 -67597121 + ID_B1 SINE B4 1 93 -131 3 796 312 287 19 96 chr17 27675637 27675741 -67596910 - RMER10B LTR ERVL -34 364 269 3 796 908 138 14 7 chr17 27676013 27676159 -67596492 + B1_Mus1 SINE Alu 2 148 0 3 796 306 71 41 41 chr17 27676159 27676200 -67596451 + A-rich Low_complexity Low_complexity 1 38 0 3 796 1245 41 0 0 chr17 27676200 27676346 -67596305 + B1_Mm SINE Alu 2 147 0 3 796 306 71 41 41 chr17 27676346 27676377 -67596274 + A-rich Low_complexity Low_complexity 39 72 0 3 796 221 303 101 0 chr17 27676535 27676644 -67596007 - PB1 SINE Alu -7 120 1 3 796 1358 64 40 6 chr17 27676785 27676959 -67595692 + B2_Mm2 SINE B2 2 181 -14 3 796 361 162 0 5 chr17 27676986 27677051 -67595600 + B2_Mm2 SINE B2 47 109 -107 3 796 279 0 0 0 chr17 27677059 27677090 -67595561 + (CAAT)n Simple_repeat Simple_repeat 3 33 0 3 796 1116 44 194 6 chr17 27677110 27677270 -67595381 + B2_Mm2 SINE B2 3 192 -3 3 796 602 238 156 6 chr17 27677308 27677481 -67595170 + B3 SINE B2 4 202 -14 3 796 489 76 0 0 chr17 27677492 27677558 -67595093 + (CA)n Simple_repeat Simple_repeat 1 66 0 3 796 1070 37 7 0 chr17 27677739 27677874 -67594777 + (TTTC)n Simple_repeat Simple_repeat 4 139 0 3 796 1229 48 0 0 chr17 27677905 27678050 -67594601 - B1_Mus2 SINE Alu -2 145 1 3 796 565 210 141 28 chr17 27678123 27678265 -67594386 - ORR1C2 LTR MaLR -38 346 189 3 796 371 218 52 22 chr17 27678324 27678441 -67594210 + MLT1J LTR MaLR 24 143 -369 3 796 266 344 63 32 chr17 27678470 27678596 -67594055 - LTR40a LTR ERVL -353 166 37 3 796 1466 35 41 0 chr17 27679476 27679648 -67593003 + B2_Mm2 SINE B2 2 180 -15 3 796 633 86 11 0 chr17 27679650 27679743 -67592908 - BC1_Mm scRNA scRNA -58 94 1 3 796 234 93 56 0 chr17 27679790 27679844 -67592807 + B2_Mm2 SINE B2 137 193 -2 3 796 1389 78 5 30 chr17 27679861 27680058 -67592593 - B2_Mm1t SINE B2 0 193 2 3 796 238 364 62 20 chr17 27680957 27681103 -67591548 + MLT1J LTR MaLR 91 242 -306 3 796 285 29 0 0 chr17 27681274 27681308 -67591343 + (TC)n Simple_repeat Simple_repeat 1 34 0 3 796 276 382 154 0 chr17 27681339 27681572 -67591079 - MLT1J LTR MaLR -44 468 200 3 796 251 277 84 84 chr17 27681586 27681728 -67590923 - MLT1J LTR MaLR -370 142 1 3 796 952 118 0 53 chr17 27681809 27681961 -67590690 + B1_Mus2 SINE Alu 1 144 -3 3 796 794 71 18 0 chr17 27681962 27682075 -67590576 + (GAAA)n Simple_repeat Simple_repeat 3 117 0 3 796 444 37 0 0 chr17 27682075 27682128 -67590523 + (GGGA)n Simple_repeat Simple_repeat 1 54 0 3 796 742 98 15 61 chr17 27682133 27682264 -67590387 + B1_Mus1 SINE Alu 23 147 -1 3 796 1003 77 0 27 chr17 27682273 27682419 -67590232 + B1_Mus1 SINE Alu 7 148 0 3 796 300 53 0 0 chr17 27682444 27682482 -67590169 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 3 796 1347 72 28 6 chr17 27682482 27682663 -67589988 + B2_Mm1a SINE B2 1 185 -8 3 796 294 73 0 0 chr17 27682674 27682715 -67589936 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 3 796 397 258 0 0 chr17 27683957 27684046 -67588605 - B1F2 SINE Alu -59 90 2 3 796 227 299 0 130 chr17 27684062 27684080 -67588571 - B1_Mur3 SINE Alu -42 107 6 3 796 391 240 130 0 chr17 27684080 27684180 -67588471 - ID_B1 SINE B4 -25 199 87 3 796 190 245 94 0 chr17 27684729 27684782 -67587869 - L2a LINE L2 -25 3401 3344 3 796 444 186 24 21 chr17 27684810 27684925 -67587726 + PB1D9 SINE Alu 4 120 0 3 796 442 191 25 18 chr17 27685112 27685214 -67587437 - B1_Mur1 SINE Alu -1 148 23 3 796 238 162 0 0 chr17 27685248 27685285 -67587366 - PB1D10 SINE Alu -53 64 28 3 796 288 0 0 0 chr17 27685285 27685317 -67587334 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 796 435 118 0 0 chr17 27685317 27685402 -67587249 + (GA)n Simple_repeat Simple_repeat 2 86 0 3 796 228 100 0 0 chr17 27685438 27685478 -67587173 + (A)n Simple_repeat Simple_repeat 1 40 0 3 796 395 162 0 12 chr17 27687383 27687464 -67585187 + CT-rich Low_complexity Low_complexity 2 81 0 3 796 1208 42 21 0 chr17 27687466 27687610 -67585041 - B1_Mus1 SINE Alu 0 148 2 3 796 314 24 0 0 chr17 27687611 27687652 -67584999 - B2_Mm2 SINE B2 -154 41 1 3 796 372 216 52 113 chr17 27687654 27687769 -67584882 + PB1D9 SINE Alu 12 119 -1 3 796 486 0 0 0 chr17 27687769 27687823 -67584828 + (CTG)n Simple_repeat Simple_repeat 3 56 0 3 796 627 237 21 7 chr17 27688296 27688436 -67584215 - B1_Mur1 SINE Alu -7 142 1 3 796 356 202 0 18 chr17 27689076 27689167 -67583484 - PB1D9 SINE Alu -52 97 11 3 796 243 0 0 0 chr17 27689389 27689416 -67583235 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 796 383 335 49 1 chr17 27689853 27690046 -67582605 + L1M5 LINE L1 5589 5791 -371 3 796 317 310 0 12 chr17 27690486 27690571 -67582080 - RSINE1 SINE B4 -69 96 13 3 796 388 158 165 143 chr17 27690583 27690716 -67581935 - B1_Mur2 SINE Alu 0 149 14 3 796 309 254 14 0 chr17 27690798 27690869 -67581782 - PB1D9 SINE Alu -8 112 41 3 796 21 36 0 0 chr17 27693182 27693210 -67579441 + GC_rich Low_complexity Low_complexity 1 28 0 3 796 23 54 0 0 chr17 27693439 27693476 -67579175 + GC_rich Low_complexity Low_complexity 1 37 0 3 796 26 0 0 0 chr17 27693830 27693856 -67578795 + GC_rich Low_complexity Low_complexity 1 26 0 3 796 26 30 0 0 chr17 27694019 27694052 -67578599 + GC_rich Low_complexity Low_complexity 1 33 0 4 796 32 0 0 0 chr17 27696859 27696891 -67575760 + AT_rich Low_complexity Low_complexity 1 32 0 4 796 25 0 0 0 chr17 27697463 27697488 -67575163 + GC_rich Low_complexity Low_complexity 1 25 0 4 796 676 208 147 37 chr17 27703194 27703384 -67569267 + B3 SINE B2 1 211 -5 4 796 211 324 50 67 chr17 27703384 27703503 -67569148 - PB1D9 SINE Alu -1 119 3 4 796 243 211 59 36 chr17 27703541 27703642 -67569009 - ID_B1 SINE B4 -69 155 10 4 796 251 267 13 13 chr17 27703645 27703721 -67568930 + CT-rich Low_complexity Low_complexity 2 77 0 4 796 2421 164 47 12 chr17 27704728 27705135 -67567516 - MTC LTR MaLR 0 421 1 4 796 269 288 12 24 chr17 27705466 27705548 -67567103 + ID2 SINE ID 1 81 -2 4 796 528 206 150 8 chr17 27705570 27705697 -67566954 + B1_Mur2 SINE Alu 4 148 -1 4 796 284 264 10 62 chr17 27705736 27705833 -67566818 + RLTR25B LTR ERVK 430 521 -507 4 796 784 57 0 0 chr17 27705750 27705855 -67566796 + B1_Mus2 SINE Alu 43 147 0 4 796 302 232 0 28 chr17 27705931 27705943 -67566708 - ID_B1 SINE B4 0 224 213 4 796 635 0 13 0 chr17 27705943 27706018 -67566633 + (TTCC)n Simple_repeat Simple_repeat 1 76 0 4 796 302 232 0 28 chr17 27706018 27706076 -67566575 - ID_B1 SINE B4 -12 212 156 4 796 201 175 0 0 chr17 27706591 27706631 -67566020 + (TCCG)n Simple_repeat Simple_repeat 1 40 0 4 796 249 256 30 24 chr17 27707202 27707310 -67565341 - PB1D9 SINE Alu -22 125 19 4 796 633 289 19 6 chr17 27707357 27707517 -67565134 - RSINE1 SINE B4 -1 164 3 4 796 539 172 120 24 chr17 27707585 27707710 -67564941 - B1_Mur2 SINE Alu -3 146 10 4 796 376 281 24 47 chr17 27707723 27707850 -67564801 - B1F SINE Alu -2 147 24 4 796 1463 212 64 53 chr17 27708074 27708152 -67564499 + RLTR20A2 LTR ERVK 49 114 -464 4 796 1087 87 0 14 chr17 27708152 27708292 -67564359 + B1_Mus2 SINE Alu 1 138 -9 4 796 189 26 0 73 chr17 27708292 27708333 -67564318 + (CAAAC)n Simple_repeat Simple_repeat 2 39 0 4 796 1463 212 65 55 chr17 27708333 27708658 -67563993 + RLTR20A2 LTR ERVK 115 445 -106 4 796 432 0 0 0 chr17 27708658 27708706 -67563945 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 796 1431 215 102 92 chr17 27708706 27708798 -67563853 + RLTR20A2 LTR ERVK 446 548 -3 4 796 878 73 88 0 chr17 27709212 27709349 -67563302 - B2_Mm2 SINE B2 0 195 47 4 796 276 326 65 0 chr17 27709427 27709519 -67563132 + PB1D10 SINE Alu 18 115 -2 4 796 609 78 85 38 chr17 27709509 27709615 -67563036 + B1_Mur4 SINE Alu 40 150 0 4 796 1346 96 21 0 chr17 27710329 27710517 -67562134 + B2_Mm1t SINE B2 1 192 -1 4 796 1586 47 5 0 chr17 27710522 27710712 -67561939 + B2_Mm1a SINE B2 2 192 -1 4 796 1284 34 0 0 chr17 27711358 27711505 -67561146 - B1_Mus2 SINE Alu 0 147 1 4 796 212 227 0 0 chr17 27711972 27712016 -67560635 + G-rich Low_complexity Low_complexity 1 44 0 4 796 302 178 24 179 chr17 27712909 27713032 -67559619 + MT2B LTR ERVL 154 257 -344 4 796 492 143 41 80 chr17 27712924 27713057 -67559594 + B1_Mur3 SINE Alu 1 125 -22 4 796 210 347 55 117 chr17 27714025 27714188 -67558463 + B4 SINE B4 69 221 -71 4 796 622 212 35 49 chr17 27714048 27714192 -67558459 + B1_Mur2 SINE Alu 7 148 -1 4 796 340 227 15 0 chr17 27714916 27714982 -67557669 - B1F SINE Alu -54 95 29 4 796 1637 32 5 0 chr17 27714982 27715170 -67557481 - B2_Mm1a SINE B2 -4 189 1 4 796 183 80 0 0 chr17 27718409 27718434 -67554217 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 4 796 1192 68 7 0 chr17 27718435 27718581 -67554070 - B1_Mus1 SINE Alu -1 147 1 4 796 272 242 16 0 chr17 27718586 27718648 -67554003 - ID4 SINE ID -1 82 20 4 796 423 0 0 0 chr17 27718648 27718695 -67553956 + (CAGCC)n Simple_repeat Simple_repeat 3 49 0 4 796 512 316 7 7 chr17 27719225 27719365 -67553286 - B3A SINE B2 -36 162 23 4 796 635 136 0 0 chr17 27719370 27719473 -67553178 - B1F2 SINE Alu -14 135 33 4 796 661 268 79 8 chr17 27719774 27720001 -67552650 + B4 SINE B4 42 286 -6 4 796 439 217 169 19 chr17 27720284 27720444 -67552207 + B3A SINE B2 4 187 -11 4 796 27 0 0 0 chr17 27720880 27720907 -67551744 + GC_rich Low_complexity Low_complexity 1 27 0 4 796 566 75 436 0 chr17 27720907 27721001 -67551650 - B1_Mus1 SINE Alu -13 135 1 4 796 1425 84 11 0 chr17 27721146 27721337 -67551314 + B2_Mm1t SINE B2 1 193 0 4 796 424 307 65 43 chr17 27721434 27721618 -67551033 - B2_Mm2 SINE B2 -3 192 5 4 796 1083 115 0 0 chr17 27721670 27721818 -67550833 + B1_Mus1 SINE Alu 1 148 0 4 796 1225 279 67 10 chr17 27721873 27722290 -67550361 + RLTR20A1 LTR ERVK 45 485 -66 4 796 855 83 0 0 chr17 27722777 27722897 -67549754 - B1_Mus1 SINE Alu -27 121 2 4 796 412 188 0 125 chr17 27722785 27722913 -67549738 - MT2B LTR ERVL -337 264 153 4 796 454 275 47 47 chr17 27722934 27723083 -67549568 - B3 SINE B2 -11 205 57 4 796 611 268 77 5 chr17 27723140 27723335 -67549316 - ID_B1 SINE B4 -13 211 3 4 796 943 146 14 0 chr17 27723423 27723567 -67549084 + B1_Mus1 SINE Alu 3 148 0 4 796 445 226 9 36 chr17 27723787 27723897 -67548754 + PB1D9 SINE Alu 12 118 -2 4 796 234 357 24 0 chr17 27723968 27724052 -67548599 + B1F SINE Alu 1 86 -63 4 796 698 187 30 0 chr17 27724697 27724831 -67547820 - B1_Mur2 SINE Alu -1 148 11 4 796 242 299 124 16 chr17 27725202 27725331 -67547320 + MLT1L LTR MaLR 253 395 -215 4 796 446 263 6 147 chr17 27725768 27725924 -67546727 - RSINE1 SINE B4 -31 134 1 4 796 757 252 64 5 chr17 27726256 27726459 -67546192 + B3 SINE B2 1 215 -1 4 796 259 260 12 49 chr17 27727260 27727341 -67545310 - ID4 SINE ID -4 79 2 4 796 304 265 61 0 chr17 27727907 27728005 -67544646 - PB1D10 SINE Alu 0 117 14 4 796 624 195 31 8 chr17 27728037 27728166 -67544485 - B1_Mur2 SINE Alu 0 149 18 4 796 359 239 62 82 chr17 27728524 27728670 -67543981 - MTD LTR MaLR 0 419 277 4 796 201 154 0 0 chr17 27728913 27728952 -67543699 + A-rich Low_complexity Low_complexity 2 40 0 4 796 456 183 77 68 chr17 27729009 27729126 -67543525 + PB1D9 SINE Alu 3 120 0 4 796 570 216 15 7 chr17 27729132 27729267 -67543384 + B1_Mur1 SINE Alu 5 140 -9 4 796 866 226 14 67 chr17 27729271 27729480 -67543171 + B3A SINE B2 1 198 0 4 796 458 225 237 76 chr17 27729708 27729944 -67542707 - B4A SINE B4 -14 278 5 4 796 835 177 13 35 chr17 27730034 27730211 -67542440 + B3 SINE B2 1 173 -20 4 796 1263 98 12 0 chr17 27730211 27730384 -67542267 + B2_Mm1t SINE B2 1 175 -18 4 796 198 0 0 0 chr17 27730390 27730412 -67542239 + (TAAAA)n Simple_repeat Simple_repeat 3 24 0 4 796 1216 36 0 0 chr17 27730412 27730552 -67542099 + B1_Mus2 SINE Alu 2 141 -6 4 796 387 0 0 0 chr17 27730554 27730597 -67542054 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 4 796 450 264 50 114 chr17 27730597 27730609 -67542042 + B2_Mm1t SINE B2 178 187 -6 4 796 636 248 13 52 chr17 27730611 27730764 -67541887 + B1_Mur2 SINE Alu 2 148 -1 4 796 664 231 35 7 chr17 27730783 27730927 -67541724 + B1_Mur1 SINE Alu 1 148 -1 4 796 1011 101 7 33 chr17 27730933 27731086 -67541565 + B1_Mur3 SINE Alu 1 149 0 4 796 517 260 168 0 chr17 27731114 27731287 -67541364 - B3 SINE B2 -14 202 1 4 796 32 26 0 0 chr17 27732085 27732124 -67540527 + AT_rich Low_complexity Low_complexity 1 39 0 4 796 216 200 0 0 chr17 27732176 27732216 -67540435 - B1_Mus1 SINE Alu -89 59 20 4 796 482 252 86 58 chr17 27732215 27732354 -67540297 - B1F2 SINE Alu -1 148 6 4 796 262 247 106 0 chr17 27732735 27732820 -67539831 - B1F1 SINE Alu -55 94 1 4 796 227 280 0 0 chr17 27732921 27732971 -67539680 - ID4 SINE ID -32 51 2 4 796 226 242 45 0 chr17 27733228 27733294 -67539357 - ID4_ SINE ID -13 70 2 4 796 639 244 33 50 chr17 27734253 27734434 -67538217 - B3 SINE B2 -37 179 2 4 796 1328 101 21 0 chr17 27734439 27734628 -67538023 - B2_Mm1t SINE B2 0 193 1 4 796 1106 67 0 0 chr17 27734675 27734809 -67537842 + B1_Mus2 SINE Alu 1 134 -13 4 796 286 0 91 0 chr17 27734811 27734855 -67537796 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 4 796 312 236 0 27 chr17 27734892 27734966 -67537685 - ID_B1 SINE B4 -71 153 82 4 796 462 36 0 0 chr17 27735043 27735099 -67537552 + (TAGA)n Simple_repeat Simple_repeat 1 56 0 4 796 331 317 0 46 chr17 27735167 27735276 -67537375 + B3A SINE B2 9 112 -86 4 796 327 368 0 70 chr17 27735837 27736024 -67536627 - MTEa LTR MaLR 0 379 206 4 796 324 203 43 0 chr17 27736847 27736916 -67535735 - B3 SINE B2 -23 193 122 4 796 879 198 93 63 chr17 27736921 27737126 -67535525 + B3 SINE B2 3 213 -3 4 796 573 205 14 64 chr17 27737135 27737276 -67535375 - B3 SINE B2 -82 134 1 4 796 589 294 126 33 chr17 27737568 27737839 -67534812 - ORR1D2 LTR MaLR -4 366 71 4 796 425 320 146 8 chr17 27738206 27738452 -67534199 + MTE-int LTR MaLR 70 349 -1231 4 796 376 356 27 40 chr17 27738454 27738679 -67533972 + ID_B1 SINE B4 3 224 0 4 796 347 326 51 36 chr17 27738964 27739101 -67533550 + B1F SINE Alu 10 148 -1 4 796 285 351 44 88 chr17 27739149 27739241 -67533410 + MTE-int LTR MaLR 801 890 -690 4 796 1167 71 136 0 chr17 27739241 27739410 -67533241 + B2_Mm1t SINE B2 1 192 -1 4 796 285 351 44 88 chr17 27739410 27739545 -67533106 + MTE-int LTR MaLR 891 1018 -562 4 796 358 252 25 42 chr17 27739866 27739986 -67532665 + MTE-int LTR MaLR 1417 1534 -46 4 796 452 182 23 0 chr17 27740338 27740426 -67532225 + PB1D9 SINE Alu 1 90 -30 5 796 332 317 6 118 chr17 27740909 27741070 -67531581 + B4A SINE B4 2 144 -148 5 796 213 39 0 0 chr17 27741164 27741190 -67531461 + (CGA)n Simple_repeat Simple_repeat 2 27 0 5 796 475 263 25 0 chr17 27741207 27741325 -67531326 - B1_Mur1 SINE Alu -28 121 1 5 796 268 196 175 55 chr17 27741400 27741522 -67531129 - B1_Mus1 SINE Alu -25 124 2 5 796 250 297 20 48 chr17 27741706 27741815 -67530836 - B3 SINE B2 -34 182 80 5 796 246 315 28 192 chr17 27742052 27742229 -67530422 - B3 SINE B2 -29 187 40 5 796 383 304 158 45 chr17 27742450 27742792 -67529859 + L1MB3 LINE L1 5793 6176 -7 5 796 908 288 13 47 chr17 27743056 27743355 -67529296 + RMER1C Other Other 749 1037 -305 5 796 1050 51 0 0 chr17 27743476 27743614 -67529037 - B1_Mus1 SINE Alu 0 148 11 5 796 454 240 39 8 chr17 27743617 27743747 -67528904 + RMER1C Other Other 1203 1336 -6 5 796 616 246 15 50 chr17 27743974 27744032 -67528619 + ID_B1 SINE B4 31 222 0 5 796 1030 78 0 0 chr17 27744032 27744173 -67528478 + B1_Mus2 SINE Alu 7 147 0 5 796 573 144 176 46 chr17 27744221 27744352 -67528299 + B1_Mur3 SINE Alu 2 149 0 5 796 218 271 17 17 chr17 27744421 27744481 -67528170 + B4A SINE B4 2 61 -231 5 796 766 177 0 26 chr17 27744590 27744741 -67527910 + B3 SINE B2 70 216 0 5 796 313 253 165 0 chr17 27744759 27744850 -67527801 + B4 SINE B4 106 211 -81 5 796 345 314 124 50 chr17 27744883 27744962 -67527689 + B4 SINE B4 3 94 -198 5 796 949 107 132 0 chr17 27744962 27745121 -67527530 + B2_Mm2 SINE B2 1 180 -15 5 796 345 314 124 50 chr17 27745121 27745282 -67527369 + B4 SINE B4 95 260 -32 5 796 1208 68 0 0 chr17 27745648 27745795 -67526856 + B1_Mus2 SINE Alu 1 147 0 5 796 1399 133 145 33 chr17 27745803 27746106 -67526545 - ORR1B1 LTR MaLR -57 337 1 5 796 318 185 23 2 chr17 27746106 27746179 -67526472 - PB1D10 SINE Alu -34 86 11 5 796 617 248 21 129 chr17 27746217 27746458 -67526193 - ID_B1 SINE B4 -8 216 2 5 796 335 313 60 15 chr17 27746640 27746773 -67525878 - B1F SINE Alu -2 147 9 5 796 894 206 130 16 chr17 27746832 27747024 -67525627 - B3 SINE B2 -1 215 2 5 796 488 206 23 0 chr17 27747330 27747443 -67525208 + B1F2 SINE Alu 31 148 -1 5 796 864 241 51 0 chr17 27747450 27747645 -67525006 + B3 SINE B2 9 213 -3 5 796 370 279 63 0 chr17 27748531 27748642 -67524009 + PB1D9 SINE Alu 3 120 0 5 796 221 290 29 0 chr17 27748718 27748787 -67523864 - B1F1 SINE Alu -78 71 1 5 796 301 238 119 0 chr17 27748795 27748879 -67523772 + MTEa LTR MaLR 22 115 -264 5 796 300 298 61 0 chr17 27748951 27749065 -67523586 + MT2A LTR ERVL 279 399 -134 5 796 238 258 0 43 chr17 27750050 27750119 -67522532 - RSINE1 SINE B4 -90 75 10 5 796 528 97 160 28 chr17 27750228 27750334 -67522317 + B1_Mur3 SINE Alu 30 149 0 5 796 295 294 0 56 chr17 27750475 27750506 -67522145 + B4A SINE B4 60 85 -207 5 796 477 201 44 10 chr17 27750506 27750617 -67522034 + B1F1 SINE Alu 2 126 -1 5 796 507 200 7 37 chr17 27750629 27750640 -67522011 + ID SINE ID 65 74 -150 5 796 619 254 57 42 chr17 27750640 27750833 -67521818 + B3A SINE B2 1 196 -2 5 796 878 43 0 0 chr17 27750840 27750956 -67521695 + B1_Mus1 SINE Alu 1 116 -32 5 796 672 159 167 0 chr17 27751406 27751532 -67521119 - B1_Mus1 SINE Alu 0 148 2 5 796 285 294 54 44 chr17 27751684 27751887 -67520764 - L2 LINE L2 -562 2857 2653 5 796 244 271 0 79 chr17 27752067 27752143 -67520508 + ID4_ SINE ID 2 71 -12 5 796 183 80 0 0 chr17 27752172 27752197 -67520454 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 796 720 35 0 0 chr17 27752197 27752283 -67520368 + (GA)n Simple_repeat Simple_repeat 2 88 0 5 796 325 241 23 57 chr17 27752302 27752390 -67520261 + PB1D10 SINE Alu 17 101 -16 5 796 220 357 51 0 chr17 27752415 27752513 -67520138 - L2 LINE L2 -969 2450 2348 5 796 278 284 34 11 chr17 27752628 27752717 -67519934 + ID_B1 SINE B4 131 221 -3 5 796 594 91 0 0 chr17 27752717 27752816 -67519835 + (CAGGA)n Simple_repeat Simple_repeat 3 101 0 5 796 294 95 0 0 chr17 27752981 27753023 -67519628 + (GGA)n Simple_repeat Simple_repeat 2 43 0 5 796 1483 54 11 21 chr17 27753052 27753241 -67519410 + B2_Mm2 SINE B2 1 187 -8 5 796 1028 60 90 0 chr17 27753302 27753436 -67519215 + B1_Mm SINE Alu 2 147 0 5 796 206 77 0 49 chr17 27753436 27753477 -67519174 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 5 796 267 233 252 15 chr17 27753659 27753790 -67518861 - B3A SINE B2 -54 162 1 5 796 707 216 30 0 chr17 27753855 27753989 -67518662 + B1F2 SINE Alu 2 139 -10 5 796 555 56 0 0 chr17 27754354 27754425 -67518226 + (GA)n Simple_repeat Simple_repeat 1 71 0 5 796 273 57 0 0 chr17 27754479 27754514 -67518137 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 796 815 256 69 80 chr17 27754521 27754810 -67517841 + B4 SINE B4 5 290 -2 5 796 897 152 7 0 chr17 27754869 27755007 -67517644 + B1_Mus2 SINE Alu 1 139 -8 5 796 270 257 0 107 chr17 27755144 27755250 -67517401 + PB1D10 SINE Alu 9 103 -14 5 796 1229 55 0 0 chr17 27755250 27755396 -67517255 + B1_Mus2 SINE Alu 2 147 0 5 796 270 257 0 107 chr17 27755396 27755411 -67517240 + PB1D10 SINE Alu 104 116 -1 5 796 326 261 28 50 chr17 27755955 27755971 -67516680 + B4A SINE B4 66 83 -209 5 796 302 258 18 82 chr17 27755971 27756081 -67516570 + PB1D7 SINE Alu 1 103 -17 5 796 1591 38 6 0 chr17 27756286 27756469 -67516182 - B2_Mm1a SINE B2 -9 184 1 5 796 1139 96 114 0 chr17 27756719 27756885 -67515766 + B2_Mm2 SINE B2 2 186 -9 5 796 284 279 130 41 chr17 27756888 27757034 -67515617 + ID_B1 SINE B4 2 160 -64 5 796 282 195 103 13 chr17 27756984 27757062 -67515589 + PB1D10 SINE Alu 29 113 -4 5 796 183 42 0 0 chr17 27757412 27757436 -67515215 + (TGGG)n Simple_repeat Simple_repeat 1 24 0 5 796 237 65 0 0 chr17 27759087 27759118 -67513533 + (TCC)n Simple_repeat Simple_repeat 3 33 0 5 796 189 0 0 0 chr17 27759791 27759812 -67512839 + (GGGA)n Simple_repeat Simple_repeat 1 21 0 5 796 28 0 0 0 chr17 27760195 27760223 -67512428 + GC_rich Low_complexity Low_complexity 1 28 0 5 796 252 186 0 0 chr17 27760314 27760373 -67512278 + (CCG)n Simple_repeat Simple_repeat 1 59 0 5 796 271 195 8 51 chr17 27760864 27760952 -67511699 + ID4 SINE ID 30 115 -37 5 796 401 279 106 14 chr17 27761211 27761353 -67511298 - RSINE1 SINE B4 -9 156 2 5 796 526 287 53 0 chr17 27761405 27761555 -67511096 + RSINE1 SINE B4 2 159 -6 5 796 572 223 207 22 chr17 27761582 27761761 -67510890 + B3 SINE B2 1 212 -4 5 796 606 262 138 0 chr17 27761875 27762035 -67510616 + ID_B1 SINE B4 34 215 -9 5 796 515 249 48 4 chr17 27762037 27762177 -67510474 + B3A SINE B2 15 176 -40 5 796 4037 178 47 57 chr17 27762293 27763192 -67509459 + RLTR25A LTR ERVK 1 890 -213 5 796 1240 48 0 0 chr17 27763196 27763342 -67509309 + B1_Mus2 SINE Alu 2 147 0 5 796 353 231 238 49 chr17 27763422 27763544 -67509107 + RLTR25B LTR ERVK 743 892 -136 5 796 378 0 0 0 chr17 27763544 27763586 -67509065 + (GA)n Simple_repeat Simple_repeat 2 43 0 5 796 353 231 238 49 chr17 27763586 27763686 -67508965 + RLTR25B LTR ERVK 893 1006 -22 5 796 371 277 48 61 chr17 27763691 27763856 -67508795 - CR1_Mam LINE CR1 -1682 522 360 5 796 273 209 0 69 chr17 27764079 27764151 -67508500 + ID_B1 SINE B4 91 157 -67 5 796 1135 75 38 60 chr17 27764208 27764224 -67508427 - B2_Mm2 SINE B2 -12 183 170 5 796 1245 54 0 0 chr17 27764224 27764371 -67508280 + B1_Mus2 SINE Alu 1 147 0 5 796 1135 75 38 60 chr17 27764371 27764539 -67508112 - B2_Mm2 SINE B2 -26 169 3 5 796 267 325 25 66 chr17 27764557 27764679 -67507972 - RSINE1 SINE B4 -29 136 20 5 796 448 174 189 8 chr17 27764843 27764965 -67507686 - B1_Mus1 SINE Alu 0 148 5 5 796 1627 31 0 35 chr17 27765113 27765313 -67507338 - B2_Mm1a SINE B2 0 193 1 5 796 961 89 82 0 chr17 27765316 27765451 -67507200 - B1_Mus1 SINE Alu -1 147 2 5 796 1152 63 14 0 chr17 27765711 27765854 -67506797 + B1_Mus2 SINE Alu 2 146 -1 5 796 1619 37 21 0 chr17 27765857 27766046 -67506605 + B2_Mm1a SINE B2 1 193 0 5 796 333 0 0 0 chr17 27766208 27766245 -67506406 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 796 770 106 6 4 chr17 27766396 27766534 -67506117 - MTA_Mm-int LTR MaLR -1118 140 1 5 796 970 86 33 7 chr17 27766531 27766684 -67505967 - MTA_Mm LTR MaLR -3 393 237 5 796 210 315 31 42 chr17 27769484 27769512 -67503139 + B4A SINE B4 60 86 -206 5 796 259 214 152 1 chr17 27769512 27769593 -67503058 + B1_Mur4 SINE Alu 1 91 -29 5 796 558 157 209 0 chr17 27769885 27770000 -67502651 + B1_Mur3 SINE Alu 2 140 -9 5 796 405 194 80 80 chr17 27770043 27770155 -67502496 - PB1D9 SINE Alu -1 119 8 5 796 259 211 53 0 chr17 27770110 27770167 -67502484 - B4 SINE B4 -155 137 78 5 796 1166 68 0 0 chr17 27770655 27770802 -67501849 + B1_Mus2 SINE Alu 1 147 0 5 796 385 275 67 30 chr17 27770814 27770949 -67501702 + ID_B1 SINE B4 81 220 -4 5 796 230 91 0 154 chr17 27772480 27772532 -67500119 + ID_B1 SINE B4 181 224 0 5 796 1044 51 51 0 chr17 27772687 27772825 -67499826 + B1_Mus2 SINE Alu 2 146 -1 5 796 263 28 0 27 chr17 27772912 27772949 -67499702 + (TAA)n Simple_repeat Simple_repeat 2 37 0 5 796 442 163 153 0 chr17 27772975 27773073 -67499578 + B1_Mur1 SINE Alu 32 144 -5 5 796 261 328 58 8 chr17 27772981 27773101 -67499550 + B4 SINE B4 126 251 -41 5 796 314 196 0 0 chr17 27773195 27773251 -67499400 - ID_B1 SINE B4 -87 137 82 5 796 252 266 63 0 chr17 27773559 27773638 -67499013 - PB1D7 SINE Alu -19 101 18 6 796 215 283 97 39 chr17 27773648 27773751 -67498900 - B1_Mur4 SINE Alu -9 141 33 6 796 1503 55 22 0 chr17 27774073 27774254 -67498397 - B2_Mm1t SINE B2 -8 185 1 6 796 386 322 39 19 chr17 27774460 27774615 -67498036 + ID_B1 SINE B4 12 169 -55 6 796 268 232 23 68 chr17 27774615 27774703 -67497948 + B2_Mm2 SINE B2 1 84 -111 6 796 369 0 0 0 chr17 27774908 27774949 -67497702 + (TTA)n Simple_repeat Simple_repeat 2 42 0 6 796 490 121 34 9 chr17 27774951 27775056 -67497595 + B1_Mus1 SINE Alu 1 114 -6 6 796 558 0 0 0 chr17 27775056 27775118 -67497533 + (GAAA)n Simple_repeat Simple_repeat 3 64 0 6 796 641 144 10 0 chr17 27775392 27775496 -67497155 - B3 SINE B2 -110 106 2 6 796 958 151 92 0 chr17 27775540 27775725 -67496926 + URR1A DNA MER1_type 19 220 -6 6 796 477 239 50 55 chr17 27775562 27775761 -67496890 - CYRA11_Mm Unknown Y-chromosome -278 339 142 6 796 376 271 8 48 chr17 27776547 27776671 -67495980 - B1F SINE Alu -26 123 5 6 796 467 193 0 0 chr17 27776712 27776795 -67495856 - B1_Mur3 SINE Alu -64 85 3 6 796 295 216 40 26 chr17 27776795 27776867 -67495784 - B1F2 SINE Alu -68 81 9 6 796 1513 68 16 0 chr17 27776888 27777080 -67495571 + B2_Mm2 SINE B2 1 195 0 6 796 378 0 0 0 chr17 27777167 27777209 -67495442 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 796 1282 34 0 0 chr17 27777242 27777389 -67495262 - B1_Mus2 SINE Alu 0 147 1 6 796 759 221 5 72 chr17 27777417 27777586 -67495065 + B3A SINE B2 1 166 -32 6 796 297 0 0 0 chr17 27777586 27777619 -67495032 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 796 759 221 5 72 chr17 27777619 27777644 -67495007 + B3A SINE B2 167 182 -16 6 796 508 229 0 28 chr17 27777680 27777788 -67494863 - B1_Mur2 SINE Alu -42 107 3 6 796 497 248 27 98 chr17 27777803 27777829 -67494822 - ID_B1 SINE B4 -9 215 197 6 796 225 94 0 0 chr17 27777829 27777861 -67494790 + (TTA)n Simple_repeat Simple_repeat 3 34 0 6 796 497 248 27 98 chr17 27777861 27778017 -67494634 - ID_B1 SINE B4 -28 196 46 6 796 276 261 0 0 chr17 27778019 27778084 -67494567 - ID_B1 SINE B4 -73 151 87 6 796 774 215 0 0 chr17 27778582 27778908 -67493743 + (CA)n Simple_repeat Simple_repeat 1 326 0 6 796 1202 48 14 0 chr17 27778919 27779064 -67493587 + B1_Mus2 SINE Alu 1 147 0 6 796 660 160 7 26 chr17 27779085 27779239 -67493412 + (CATA)n Simple_repeat Simple_repeat 4 154 0 6 796 246 192 0 0 chr17 27779293 27779345 -67493306 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 796 392 308 87 60 chr17 27779901 27780084 -67492567 + ID_B1 SINE B4 1 188 -36 6 796 267 79 0 0 chr17 27780416 27780454 -67492197 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 6 796 428 233 8 65 chr17 27780454 27780570 -67492081 - B1_Mus1 SINE Alu -11 137 29 6 796 617 185 50 0 chr17 27780544 27780663 -67491988 - B1_Mur4 SINE Alu -21 129 5 6 796 524 263 21 49 chr17 27780683 27780827 -67491824 - B1F SINE Alu -8 141 2 6 796 541 209 17 17 chr17 27781064 27781181 -67491470 + PB1D10 SINE Alu 1 117 0 6 796 233 250 11 0 chr17 27781203 27781295 -67491356 + (CA)n Simple_repeat Simple_repeat 1 93 0 6 796 544 302 0 8 chr17 27781368 27781498 -67491153 + ID_B1 SINE B4 82 210 -14 6 796 262 232 232 0 chr17 27781505 27781574 -67491077 - 5S rRNA rRNA -36 85 1 6 796 1012 238 9 9 chr17 27781610 27781822 -67490829 + B3 SINE B2 2 213 -3 6 796 1255 28 14 0 chr17 27781857 27782001 -67490650 - B1_Mm SINE Alu 0 147 2 6 796 339 194 16 0 chr17 27782390 27782452 -67490199 + ID_B1 SINE B4 110 172 -52 6 796 349 210 179 32 chr17 27783373 27783496 -67489155 - B1_Mur1 SINE Alu 0 149 9 6 796 672 283 132 20 chr17 27783623 27783872 -67488779 + B4A SINE B4 1 277 -15 6 796 281 276 0 6 chr17 27783906 27784074 -67488577 + (CA)n Simple_repeat Simple_repeat 2 168 0 6 796 450 65 0 0 chr17 27784157 27784219 -67488432 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 796 1186 55 0 27 chr17 27784324 27784474 -67488177 + B1_Mm SINE Alu 2 147 0 6 796 2293 75 26 56 chr17 27784693 27785032 -67487619 + ORR1A4 LTR MaLR 1 329 0 6 796 991 126 7 0 chr17 27785213 27785348 -67487303 - B1_Mur3 SINE Alu -12 137 2 6 796 412 325 76 5 chr17 27785444 27785642 -67487009 + ID_B1 SINE B4 12 223 -1 6 796 810 123 0 0 chr17 27785794 27785916 -67486735 + B1_Mur4 SINE Alu 11 132 -18 6 796 870 104 0 0 chr17 27785914 27786039 -67486612 - B2_Mm2 SINE B2 -70 125 1 6 796 293 192 62 37 chr17 27786185 27786266 -67486385 + MTEa LTR MaLR 293 375 -4 6 796 436 295 0 35 chr17 27786345 27786461 -67486190 - PB1D10 SINE Alu 0 117 6 6 796 529 221 0 0 chr17 27786508 27786612 -67486039 + RSINE1 SINE B4 17 120 -45 6 796 1254 54 0 0 chr17 27786612 27786760 -67485891 + B1_Mus1 SINE Alu 1 148 0 6 796 262 244 12 35 chr17 27786855 27786940 -67485711 + RSINE1 SINE B4 43 125 -40 6 796 27 0 0 0 chr17 27786957 27786984 -67485667 + AT_rich Low_complexity Low_complexity 1 27 0 6 796 415 147 176 0 chr17 27786989 27787091 -67485560 + B3A SINE B2 1 120 -78 6 796 447 202 19 28 chr17 27787103 27787210 -67485441 + ID_B1 SINE B4 116 221 -3 6 797 345 323 22 8 chr17 27787375 27787509 -67485142 + MIR SINE MIR 44 179 -83 6 797 365 270 31 34 chr17 27787932 27788078 -67484573 + MIR SINE MIR 18 170 -98 6 797 619 243 55 7 chr17 27788145 27788290 -67484361 + RSINE1 SINE B4 12 163 -2 6 797 1032 44 7 0 chr17 27788344 27788481 -67484170 + B1_Mus1 SINE Alu 11 148 0 6 797 206 103 51 0 chr17 27788483 27788522 -67484129 + (CAAA)n Simple_repeat Simple_repeat 3 43 0 6 797 339 268 121 21 chr17 27788525 27788666 -67483985 + ID_B1 SINE B4 69 223 -1 6 797 279 79 0 0 chr17 27789318 27789356 -67483295 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 797 667 267 12 10 chr17 27789469 27789671 -67482980 - B3A SINE B2 -4 212 9 6 797 207 0 0 0 chr17 27789694 27789717 -67482934 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 6 797 889 114 0 0 chr17 27789717 27789848 -67482803 - B1_Mus2 SINE Alu -11 136 6 6 797 268 317 38 84 chr17 27789894 27790025 -67482626 - ID_B1 SINE B4 -98 126 2 6 797 234 128 0 0 chr17 27790204 27790243 -67482408 + (CAT)n Simple_repeat Simple_repeat 2 40 0 6 797 423 0 0 0 chr17 27790268 27790315 -67482336 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 797 402 367 58 58 chr17 27790949 27791348 -67481303 + MT2A LTR ERVL 1 399 -134 6 797 1311 82 42 37 chr17 27791531 27791722 -67480929 + B2_Mm2 SINE B2 2 193 -2 6 797 21 0 0 0 chr17 27792394 27792415 -67480236 + GC_rich Low_complexity Low_complexity 1 21 0 6 797 21 36 0 0 chr17 27792486 27792514 -67480137 + GC_rich Low_complexity Low_complexity 1 28 0 6 797 204 125 0 0 chr17 27792583 27792615 -67480036 + (TCC)n Simple_repeat Simple_repeat 1 32 0 6 797 219 284 156 39 chr17 27793621 27793775 -67478876 + L2b LINE L2 3122 3293 -82 6 797 288 130 0 0 chr17 27793827 27793873 -67478778 + (TGAA)n Simple_repeat Simple_repeat 4 49 0 6 797 357 208 14 14 chr17 27794863 27794936 -67477715 - ZP3AR Satellite Satellite -120 92 20 6 797 204 40 0 0 chr17 27795036 27795061 -67477590 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 6 797 568 217 0 132 chr17 27795061 27795124 -67477527 - B1_Mur4 SINE Alu -12 138 78 6 797 1371 89 5 5 chr17 27795124 27795315 -67477336 - B2_Mm2 SINE B2 -1 194 4 6 797 568 217 0 132 chr17 27795315 27795410 -67477241 - B1_Mur4 SINE Alu -73 77 1 6 797 638 113 18 36 chr17 27795429 27795539 -67477112 - B1_Mur1 SINE Alu 0 149 42 6 797 540 240 0 0 chr17 27795539 27795664 -67476987 + (CCTG)n Simple_repeat Simple_repeat 2 126 0 6 797 478 264 64 32 chr17 27795668 27795856 -67476795 - B3A SINE B2 -4 194 1 6 797 625 263 15 0 chr17 27795917 27796054 -67476597 + RSINE1 SINE B4 4 142 -23 6 797 306 106 0 0 chr17 27796107 27796154 -67476497 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 797 345 271 92 18 chr17 27796160 27796269 -67476382 + ID_B1 SINE B4 105 221 -3 6 797 827 234 79 38 chr17 27796746 27796962 -67475689 + B3 SINE B2 4 211 -5 6 797 1058 148 11 33 chr17 27797116 27797297 -67475354 + B2_Mm2 SINE B2 1 177 -18 6 797 282 234 30 69 chr17 27797314 27797415 -67475236 + MER53 DNA hAT 76 172 -21 6 797 233 356 14 0 chr17 27797489 27797562 -67475089 + RSINE1 SINE B4 75 148 -17 6 797 1647 16 16 0 chr17 27797636 27797820 -67474831 + B2_Mm1a SINE B2 2 188 -5 6 797 246 62 0 0 chr17 27797957 27797989 -67474662 + (CG)n Simple_repeat Simple_repeat 1 32 0 6 797 507 17 0 0 chr17 27797989 27798048 -67474603 + (TG)n Simple_repeat Simple_repeat 2 61 0 6 797 461 221 67 93 chr17 27798134 27798284 -67474367 - B4A SINE B4 -145 147 2 6 797 814 67 244 0 chr17 27798807 27798926 -67473725 - B1_Mus1 SINE Alu 0 148 1 6 797 21 0 0 0 chr17 27798927 27798948 -67473703 + AT_rich Low_complexity Low_complexity 1 21 0 6 797 385 294 45 3 chr17 27798962 27799080 -67473571 - B3 SINE B2 -6 210 89 6 797 691 230 0 0 chr17 27799394 27799533 -67473118 - ID_B1 SINE B4 -2 222 84 6 797 384 230 0 13 chr17 27799805 27799880 -67472771 - B1_Mur1 SINE Alu -1 148 75 6 797 306 260 90 0 chr17 27799885 27799985 -67472666 - B1F SINE Alu -5 144 36 7 797 387 127 0 0 chr17 27800000 27800063 -67472588 + (TG)n Simple_repeat Simple_repeat 1 63 0 7 797 989 105 15 0 chr17 27800151 27800284 -67472367 + B1_Mur3 SINE Alu 5 139 -10 7 797 1623 37 21 0 chr17 27800380 27800569 -67472082 + B2_Mm1a SINE B2 1 193 0 7 797 612 49 0 0 chr17 27800582 27800664 -67471987 + B1_Mus2 SINE Alu 66 147 0 7 797 282 56 0 0 chr17 27800670 27800706 -67471945 + (TATG)n Simple_repeat Simple_repeat 4 39 0 7 797 640 181 55 0 chr17 27800730 27800857 -67471794 - B3 SINE B2 -80 136 3 7 797 1028 144 0 0 chr17 27801036 27801182 -67471469 - B1_Mur1 SINE Alu -1 148 3 7 797 298 273 212 29 chr17 27801216 27801386 -67471265 + B3 SINE B2 1 201 -15 7 797 198 0 0 0 chr17 27801387 27801409 -67471242 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 7 797 819 148 28 7 chr17 27801445 27801588 -67471063 - RSINE1 SINE B4 -12 153 8 7 797 781 37 0 44 chr17 27801623 27801737 -67470914 - B2_Mm1a SINE B2 0 193 85 7 797 621 217 25 89 chr17 27801749 27801906 -67470745 + B1_Mur2 SINE Alu 1 147 -2 7 797 244 240 0 0 chr17 27801929 27801979 -67470672 + RSINE1 SINE B4 30 79 -86 7 797 250 47 45 23 chr17 27802013 27802057 -67470594 + (CATA)n Simple_repeat Simple_repeat 3 47 0 7 797 523 228 0 0 chr17 27802100 27802201 -67470450 + ID_B1 SINE B4 116 216 -8 7 797 318 256 26 0 chr17 27802527 27802605 -67470046 - ID4_ SINE ID -2 81 2 7 797 212 0 36 0 chr17 27803324 27803352 -67469299 + (TTA)n Simple_repeat Simple_repeat 2 30 0 7 797 870 249 14 18 chr17 27803352 27803562 -67469089 - ID_B1 SINE B4 -12 212 3 7 797 530 177 8 0 chr17 27803570 27803694 -67468957 + (TATATG)n Simple_repeat Simple_repeat 4 128 0 7 797 318 244 133 56 chr17 27803715 27803858 -67468793 - RSINE1 SINE B4 -10 155 2 7 797 494 245 28 0 chr17 27803866 27803972 -67468679 - PB1D10 SINE Alu -8 109 1 7 797 260 370 47 5 chr17 27804277 27804470 -67468181 + L1MC1 LINE L1 6004 6204 -129 7 797 1179 37 0 0 chr17 27804572 27804708 -67467943 + B1_Mus1 SINE Alu 3 138 -10 7 797 567 0 0 0 chr17 27804708 27804771 -67467880 + (TAAAA)n Simple_repeat Simple_repeat 2 64 0 7 797 1470 54 38 0 chr17 27805527 27805712 -67466939 - B2_Mm2 SINE B2 -3 192 1 7 797 450 297 9 0 chr17 27805720 27805831 -67466820 - PB1D9 SINE Alu -7 113 2 7 797 575 221 301 0 chr17 27805858 27806021 -67466630 - B3 SINE B2 0 216 5 7 797 29 20 0 39 chr17 27806029 27806057 -67466594 + AT_rich Low_complexity Low_complexity 1 27 0 7 797 216 0 0 0 chr17 27806066 27806090 -67466561 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 797 1154 68 0 7 chr17 27806090 27806227 -67466424 - B1_Mus2 SINE Alu -9 138 2 7 797 29 20 0 39 chr17 27806227 27806249 -67466402 + AT_rich Low_complexity Low_complexity 1 22 0 7 797 1011 199 61 10 chr17 27806257 27806455 -67466196 - B3 SINE B2 -8 208 1 7 797 373 261 82 25 chr17 27806458 27806580 -67466071 - ID_B1 SINE B4 -1 223 95 7 797 286 266 79 40 chr17 27807303 27807421 -67465230 + PB1 SINE Alu 10 125 -2 7 797 318 26 0 0 chr17 27807430 27807469 -67465182 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 7 797 599 217 7 55 chr17 27807521 27807667 -67464984 + ID_B1 SINE B4 86 224 0 7 797 1565 52 0 15 chr17 27807704 27807901 -67464750 + B2_Mm2 SINE B2 1 194 -1 7 797 998 83 0 15 chr17 27807905 27808039 -67464612 + B1_Mm SINE Alu 1 132 -15 7 797 216 190 0 23 chr17 27808731 27808774 -67463877 + CT-rich Low_complexity Low_complexity 3 44 0 7 797 870 160 12 30 chr17 27808776 27808944 -67463707 + B3 SINE B2 49 213 -3 7 797 24 0 0 0 chr17 27808944 27808968 -67463683 + AT_rich Low_complexity Low_complexity 1 24 0 7 797 260 274 80 54 chr17 27808989 27809101 -67463550 + RSINE1 SINE B4 11 125 -40 7 797 1229 55 0 0 chr17 27809229 27809374 -67463277 + B1_Mus2 SINE Alu 3 147 0 7 797 590 144 16 63 chr17 27809427 27809553 -67463098 + PB1D9 SINE Alu 1 120 0 7 797 473 287 65 22 chr17 27809569 27809754 -67462897 + B3A SINE B2 3 195 -3 7 797 377 233 146 0 chr17 27809772 27809875 -67462776 + PB1D9 SINE Alu 1 118 -2 7 797 1158 82 0 0 chr17 27809882 27810028 -67462623 + B1_Mus2 SINE Alu 2 147 0 7 797 225 94 0 0 chr17 27810028 27810060 -67462591 + (A)n Simple_repeat Simple_repeat 1 32 0 7 797 1792 84 6 126 chr17 27810082 27810407 -67462244 + ORR1A2 LTR MaLR 1 286 -41 7 797 1241 41 0 0 chr17 27810408 27810555 -67462096 + B1_Mm SINE Alu 1 147 0 7 797 1088 68 7 33 chr17 27810556 27810707 -67461944 + B1_Mus2 SINE Alu 1 147 0 7 797 258 125 0 0 chr17 27810707 27810755 -67461896 + (A)n Simple_repeat Simple_repeat 1 48 0 7 797 301 87 0 80 chr17 27810755 27810805 -67461846 + ORR1A2 LTR MaLR 272 317 -9 7 797 826 301 121 52 chr17 27810906 27811443 -67461208 + L1MB3 LINE L1 5291 5864 -319 7 797 244 218 0 18 chr17 27811453 27811509 -67461142 + B4A SINE B4 43 97 -195 7 797 1458 65 16 0 chr17 27811555 27811739 -67460912 + B2_Mm2 SINE B2 1 187 -8 7 797 642 187 0 8 chr17 27811747 27811871 -67460780 - B1_Mus1 SINE Alu -25 123 1 7 797 559 202 54 8 chr17 27811890 27812020 -67460631 - B1F SINE Alu -5 144 9 7 797 278 242 15 111 chr17 27811936 27812071 -67460580 - MT2B2 LTR ERVL -334 250 129 7 797 250 350 84 0 chr17 27812068 27812211 -67460440 + MER20 DNA MER1_type 7 161 -58 7 797 351 57 0 36 chr17 27812271 27812326 -67460325 - HAL1-3A_ME LINE L1 -830 2028 1976 7 797 291 257 0 0 chr17 27812326 27812400 -67460251 + (TG)n Simple_repeat Simple_repeat 2 75 0 7 797 256 243 14 41 chr17 27812400 27812473 -67460178 - tRNA-Ala-GCY_ tRNA tRNA -2 73 3 7 797 235 246 16 16 chr17 27812904 27812966 -67459685 + CT-rich Low_complexity Low_complexity 5 66 0 7 797 773 116 0 0 chr17 27812998 27813110 -67459541 - B1_Mur4 SINE Alu -5 145 34 7 797 305 275 12 12 chr17 27813115 27813196 -67459455 - ID4_ SINE ID -1 82 2 7 797 718 225 7 0 chr17 27813313 27813451 -67459200 - B1_Mur2 SINE Alu -10 139 1 7 797 206 81 0 26 chr17 27813775 27813813 -67458838 + (TGGGGG)n Simple_repeat Simple_repeat 4 40 0 7 797 276 30 0 0 chr17 27814168 27814201 -67458450 + (TC)n Simple_repeat Simple_repeat 2 34 0 7 797 188 218 0 35 chr17 27814490 27814547 -67458104 + (CCCA)n Simple_repeat Simple_repeat 4 58 0 7 797 795 153 84 0 chr17 27814567 27814698 -67457953 - B1_Mur1 SINE Alu -6 143 2 7 797 314 301 53 5 chr17 27814722 27814909 -67457742 + L2a LINE L2 2954 3149 -277 7 797 234 353 118 29 chr17 27814958 27815203 -67457448 + L2a LINE L2 3151 3417 -9 7 797 668 54 0 11 chr17 27815291 27815384 -67457267 - B1_Mus1 SINE Alu -55 93 2 7 797 402 236 125 8 chr17 27815384 27815423 -67457228 - B4 SINE B4 -202 90 37 7 797 252 89 43 43 chr17 27815499 27815569 -67457082 + (TCTCTG)n Simple_repeat Simple_repeat 3 72 0 7 797 377 172 0 11 chr17 27815573 27815667 -67456984 + (TG)n Simple_repeat Simple_repeat 2 94 0 7 797 334 152 0 33 chr17 27815670 27815731 -67456920 - HAL1-3A_ME LINE L1 -840 2018 1960 7 797 207 0 0 0 chr17 27816631 27816654 -67455997 + (TG)n Simple_repeat Simple_repeat 1 23 0 7 797 220 347 138 33 chr17 27817193 27817224 -67455427 + ID_B1 SINE B4 56 223 -1 7 797 242 290 10 39 chr17 27817224 27817345 -67455306 + B1F SINE Alu 5 148 -1 7 797 495 290 6 90 chr17 27817360 27817538 -67455113 + RSINE1 SINE B4 2 164 -1 7 797 1677 190 11 47 chr17 27817648 27818007 -67454644 - ORR1B1 LTR MaLR -8 386 41 7 797 280 250 25 133 chr17 27818005 27818125 -67454526 - MT2B LTR ERVL -328 273 167 7 797 524 209 19 0 chr17 27818021 27818126 -67454525 - B1_Mur2 SINE Alu -41 108 2 7 797 180 0 0 0 chr17 27818127 27818147 -67454504 + (CA)n Simple_repeat Simple_repeat 1 20 0 7 797 620 199 42 2 chr17 27818296 27818466 -67454185 - B2_Mm2 SINE B2 -4 212 27 7 797 638 84 3 26 chr17 27818464 27818584 -67454067 - B1_Mm SINE Alu -5 115 4 7 797 328 215 156 37 chr17 27818465 27818600 -67454051 - B4A SINE B4 -71 221 71 7 797 267 125 0 0 chr17 27818589 27818629 -67454022 - B2_Mm2 SINE B2 -155 40 1 7 797 861 215 20 46 chr17 27818785 27818900 -67453751 - B3 SINE B2 -4 212 100 7 797 2222 99 11 72 chr17 27818900 27818951 -67453700 - ORR1A2 LTR MaLR 0 327 287 7 797 1400 79 21 0 chr17 27818951 27819140 -67453511 - B2_Mm1t SINE B2 0 193 1 7 797 2222 99 11 72 chr17 27819140 27819436 -67453215 - ORR1A2 LTR MaLR -41 286 1 7 797 861 215 20 46 chr17 27819436 27819515 -67453136 - B3 SINE B2 -117 99 23 7 797 328 264 225 5 chr17 27821031 27821186 -67451465 + B3A SINE B2 3 190 -3 7 797 561 293 89 12 chr17 27821212 27821381 -67451270 + B4A SINE B4 10 191 -101 7 797 250 244 0 104 chr17 27821460 27821556 -67451095 - MT2B LTR ERVL -322 279 194 7 797 591 191 0 42 chr17 27821476 27821596 -67451055 - B1_Mur4 SINE Alu -33 117 3 7 797 203 0 37 0 chr17 27821812 27821839 -67450812 + (CGGGGG)n Simple_repeat Simple_repeat 2 29 0 7 797 25 31 0 0 chr17 27822887 27822919 -67449732 + GC_rich Low_complexity Low_complexity 1 32 0 7 797 360 347 136 15 chr17 27824092 27824564 -67448087 + L2a LINE L2 2792 3324 -102 7 797 366 328 38 30 chr17 27825744 27825876 -67446775 - ID_B1 SINE B4 0 224 92 7 797 327 256 93 0 chr17 27826067 27826153 -67446498 - MIR SINE MIR -119 143 50 7 797 2408 57 6 0 chr17 27826338 27826656 -67445995 - MTB_Mm LTR MaLR -87 320 1 8 797 212 207 20 17 chr17 27827165 27827225 -67445426 - MIR SINE MIR -107 169 103 8 797 198 351 0 13 chr17 27827503 27827581 -67445070 + MIR SINE MIR 61 137 -125 8 797 277 303 80 10 chr17 27828716 27828739 -67443912 - B4A SINE B4 -185 107 1 8 797 433 221 0 0 chr17 27828739 27828816 -67443835 - B3 SINE B2 -139 77 1 8 797 183 42 0 0 chr17 27828826 27828850 -67443801 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 797 1178 54 0 26 chr17 27828852 27829003 -67443648 - B1_Mus2 SINE Alu 0 147 1 8 797 1323 74 62 17 chr17 27829011 27829190 -67443461 - B2_Mm2 SINE B2 -8 187 1 8 797 570 242 78 0 chr17 27829479 27829607 -67443044 - B1_Mur2 SINE Alu -7 142 5 8 797 893 197 43 5 chr17 27829622 27829806 -67442845 - B3 SINE B2 -1 215 25 8 797 287 189 0 0 chr17 27829940 27829993 -67442658 - B1_Mur2 SINE Alu -3 146 94 8 797 1079 154 49 44 chr17 27829985 27830316 -67442335 - LTRIS5 LTR ERV1 -4 508 1 8 797 1108 183 34 43 chr17 27830316 27830478 -67442173 - MuRRS-int LTR ERV1 0 4690 4529 8 797 1465 49 54 0 chr17 27830478 27830663 -67441988 + B2_Mm2 SINE B2 1 195 0 8 797 1108 183 34 43 chr17 27830663 27830734 -67441917 - MuRRS-int LTR ERV1 -162 4528 4460 8 797 4893 197 43 28 chr17 27830802 27832533 -67440118 - MuRRS4-int LTR ERV1 -241 4449 1649 8 797 3547 10 8 0 chr17 27832533 27832926 -67439725 - MTA_Mm LTR MaLR 0 396 1 8 797 9630 17 6 0 chr17 27832926 27834017 -67438634 - MTA_Mm-int LTR MaLR 0 1098 1 8 797 3540 10 8 0 chr17 27834017 27834410 -67438241 - MTA_Mm LTR MaLR 0 396 1 8 797 5971 262 39 36 chr17 27834410 27835926 -67436725 - MuRRS4-int LTR ERV1 -3503 1560 27 8 797 949 202 283 28 chr17 27836102 27836458 -67436193 - LTRIS5 LTR ERV1 0 447 1 8 797 310 253 76 0 chr17 27836461 27836540 -67436111 - B1_Mur2 SINE Alu -55 94 10 8 797 706 233 155 6 chr17 27837014 27837246 -67435405 - MTD LTR MaLR -56 351 103 8 797 342 0 0 0 chr17 27839429 27839467 -67433184 + (T)n Simple_repeat Simple_repeat 1 38 0 8 797 1172 75 0 0 chr17 27840009 27840155 -67432496 - B1_Mus2 SINE Alu 0 147 2 8 797 454 311 7 7 chr17 27840164 27840300 -67432351 - ID_B1 SINE B4 -8 216 81 8 797 752 181 80 0 chr17 27840330 27840468 -67432183 - B1_Mur2 SINE Alu 0 149 1 8 797 525 104 0 0 chr17 27840493 27840570 -67432081 + (TCC)n Simple_repeat Simple_repeat 2 78 0 8 797 1263 27 7 0 chr17 27840779 27840925 -67431726 + B1_Mus1 SINE Alu 2 148 0 8 797 180 0 0 0 chr17 27840968 27840988 -67431663 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 8 797 243 0 0 0 chr17 27840988 27841015 -67431636 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 8 797 389 250 220 0 chr17 27841016 27841166 -67431485 - ID_B1 SINE B4 -34 190 8 8 797 1298 92 49 0 chr17 27842303 27842487 -67430164 - B2_Mm1t SINE B2 0 193 1 8 797 192 163 0 0 chr17 27842731 27842774 -67429877 + (TGG)n Simple_repeat Simple_repeat 3 45 0 8 797 204 67 0 0 chr17 27843092 27843122 -67429529 + (G)n Simple_repeat Simple_repeat 1 30 0 8 797 334 240 126 23 chr17 27843255 27843386 -67429265 + B3A SINE B2 49 180 -15 8 797 430 195 73 0 chr17 27843386 27843468 -67429183 + B3A SINE B2 21 108 -90 8 797 253 157 0 38 chr17 27843562 27843615 -67429036 + PB1D10 SINE Alu 66 116 -1 8 797 821 186 150 21 chr17 27843642 27843829 -67428822 + B3 SINE B2 5 215 -1 8 797 268 413 39 0 chr17 27844424 27844579 -67428072 - MIRb SINE MIR -7 261 101 8 797 244 83 42 0 chr17 27845025 27845073 -67427578 + (CTGGGG)n Simple_repeat Simple_repeat 3 52 0 8 797 21 36 0 0 chr17 27847975 27848003 -67424648 + AT_rich Low_complexity Low_complexity 1 28 0 8 797 207 0 0 0 chr17 27848752 27848775 -67423876 + (CG)n Simple_repeat Simple_repeat 2 24 0 8 797 217 161 48 24 chr17 27849095 27849178 -67423473 + CT-rich Low_complexity Low_complexity 3 87 0 8 797 963 233 23 32 chr17 27849212 27849429 -67423222 + B3 SINE B2 2 216 0 8 797 323 282 204 0 chr17 27849434 27849537 -67423114 - ID_B1 SINE B4 -17 207 84 8 797 689 163 5 0 chr17 27850201 27850323 -67422328 + B1_Mus2 SINE Alu 13 135 -12 8 797 218 32 0 31 chr17 27850323 27850355 -67422296 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 8 797 181 343 90 10 chr17 27850488 27850588 -67422063 + MIRc SINE MIR 18 125 -143 8 797 182 91 30 0 chr17 27851994 27852027 -67420624 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 8 797 998 112 6 17 chr17 27852111 27852292 -67420359 + (TC)n Simple_repeat Simple_repeat 2 180 0 8 797 570 128 37 22 chr17 27852293 27852429 -67420222 + CT-rich Low_complexity Low_complexity 1 138 0 8 797 233 139 0 0 chr17 27852461 27852497 -67420154 - PB1D9 SINE Alu -77 43 8 8 797 214 217 0 61 chr17 27852497 27852510 -67420141 - ID_B1 SINE B4 -100 124 79 8 797 1103 102 0 0 chr17 27852540 27852687 -67419964 - B1_Mus2 SINE Alu 0 147 1 8 797 230 331 47 24 chr17 27852892 27853019 -67419632 + Charlie5 DNA MER1_type 2489 2618 -6 8 797 628 223 132 11 chr17 27853268 27853458 -67419193 - B3 SINE B2 -2 214 2 8 797 337 229 128 37 chr17 27853471 27853580 -67419071 - PB1D9 SINE Alu -1 119 1 8 797 187 307 136 0 chr17 27856349 27856437 -67416214 - L2b LINE L2 -6 3420 3321 8 797 190 277 60 12 chr17 27856628 27856712 -67415939 - L2b LINE L2 -371 3004 2917 8 797 453 36 0 0 chr17 27857872 27857927 -67414724 + (CA)n Simple_repeat Simple_repeat 1 55 0 8 797 234 0 0 0 chr17 27858147 27858173 -67414478 + (TG)n Simple_repeat Simple_repeat 1 26 0 8 797 2229 153 22 105 chr17 27858963 27859104 -67413547 + MTC LTR MaLR 1 105 -316 8 797 1013 139 37 21 chr17 27859104 27859295 -67413356 + B2_Mm2 SINE B2 1 194 -1 8 797 846 172 7 15 chr17 27859305 27859441 -67413210 - B1_Mm SINE Alu -12 135 1 8 797 2229 153 22 105 chr17 27859441 27859747 -67412904 + MTC LTR MaLR 109 421 0 8 797 269 266 35 71 chr17 27860069 27860154 -67412497 + ID SINE ID 2 83 -141 8 797 201 179 0 25 chr17 27862776 27862816 -67409835 + GA-rich Low_complexity Low_complexity 2 40 0 8 797 318 319 22 0 chr17 27863942 27864033 -67408618 + RSINE1 SINE B4 4 96 -69 8 797 1180 41 14 7 chr17 27864184 27864330 -67408321 - B1_Mm SINE Alu 0 147 1 8 797 553 262 28 28 chr17 27864468 27864613 -67408038 + B1_Mur1 SINE Alu 2 146 -3 8 797 213 241 0 0 chr17 27864676 27864730 -67407921 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 797 864 168 0 0 chr17 27864741 27864914 -67407737 + (CA)n Simple_repeat Simple_repeat 2 174 0 8 797 494 245 0 10 chr17 27866594 27866697 -67405954 - PB1D9 SINE Alu -18 102 1 8 797 216 0 0 0 chr17 27866729 27866753 -67405898 + (TG)n Simple_repeat Simple_repeat 2 25 0 8 797 802 148 0 22 chr17 27866755 27866893 -67405758 - B3 SINE B2 -81 135 1 8 797 367 208 69 0 chr17 27867532 27867604 -67405047 + MLT1J LTR MaLR 68 144 -368 8 797 682 226 60 21 chr17 27867741 27867837 -67404814 + ID_B1 SINE B4 24 224 0 8 797 1060 58 0 0 chr17 27867837 27867976 -67404675 + B1_Mus2 SINE Alu 9 147 0 8 797 237 155 0 0 chr17 27867976 27868034 -67404617 + A-rich Low_complexity Low_complexity 1 58 0 8 797 1466 64 21 0 chr17 27868521 27868709 -67403942 + B2_Mm2 SINE B2 1 192 -3 8 797 715 175 33 53 chr17 27868750 27868901 -67403750 - B1_Mur2 SINE Alu -1 148 1 8 797 208 238 0 0 chr17 27868913 27868955 -67403696 + (TG)n Simple_repeat Simple_repeat 1 42 0 8 797 360 121 0 18 chr17 27869120 27869204 -67403447 - B1_Mur4 SINE Alu -1 149 40 8 797 393 22 0 0 chr17 27869878 27869924 -67402727 + (TG)n Simple_repeat Simple_repeat 2 47 0 8 797 396 0 0 0 chr17 27871644 27871688 -67400963 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 797 331 279 129 16 chr17 27871974 27872098 -67400553 - L2a LINE L2 -9 3417 3280 8 797 450 246 26 26 chr17 27872309 27872426 -67400225 + PB1D10 SINE Alu 1 117 0 8 797 597 176 9 0 chr17 27872802 27872910 -67399741 + ID_B1 SINE B4 116 224 0 8 797 1472 53 27 0 chr17 27873142 27873330 -67399321 - B2_Mm2 SINE B2 -2 193 1 8 797 250 265 0 105 chr17 27873916 27873992 -67398659 + ID4 SINE ID 16 83 0 8 797 469 316 6 28 chr17 27874300 27874482 -67398169 + (TGGG)n Simple_repeat Simple_repeat 2 179 0 8 797 1201 75 0 0 chr17 27875342 27875489 -67397162 + B1_Mus2 SINE Alu 1 147 0 8 797 251 281 38 1 chr17 27875524 27875612 -67397039 - MIRc SINE MIR -93 169 80 8 797 296 337 109 27 chr17 27875610 27875793 -67396858 - MIR SINE MIR -40 222 25 8 797 244 308 73 18 chr17 27875971 27876080 -67396571 - MIR SINE MIR -128 134 20 8 797 578 202 34 0 chr17 27876610 27876729 -67395922 - B1_Mur1 SINE Alu -17 132 10 8 797 211 383 41 16 chr17 27876932 27877054 -67395597 + MIR SINE MIR 24 148 -60 8 797 394 169 34 69 chr17 27877054 27877180 -67395471 + PB1 SINE Alu 1 127 0 8 797 193 258 127 16 chr17 27877381 27877444 -67395207 - MIRb SINE MIR -77 191 122 8 797 278 170 108 0 chr17 27877798 27877868 -67394783 - MIR SINE MIR -81 181 110 8 797 231 200 0 0 chr17 27878914 27878959 -67393692 - B4A SINE B4 -129 163 119 8 797 276 101 355 27 chr17 27879021 27879131 -67393520 - B2_Mm2 SINE B2 -3 192 47 8 797 1219 89 0 0 chr17 27879193 27879361 -67393290 - B2_Mm2 SINE B2 -26 169 2 8 797 315 266 487 13 chr17 27879361 27879516 -67393135 - B4A SINE B4 -61 231 2 8 797 653 213 160 112 chr17 27879524 27879591 -67393060 - ID_B1 SINE B4 -8 216 159 8 797 1218 61 0 0 chr17 27879591 27879738 -67392913 + B1_Mus1 SINE Alu 1 147 -1 8 797 653 213 160 112 chr17 27879738 27879876 -67392775 - ID_B1 SINE B4 -66 158 1 8 797 288 0 0 0 chr17 27881028 27881060 -67391591 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 797 234 0 0 0 chr17 27881088 27881114 -67391537 + (TG)n Simple_repeat Simple_repeat 2 27 0 8 797 1185 73 18 0 chr17 27881382 27881546 -67391105 - B2_Mm2 SINE B2 -27 168 2 8 797 333 0 0 0 chr17 27881572 27881609 -67391042 + (TG)n Simple_repeat Simple_repeat 1 37 0 9 797 500 186 142 0 chr17 27881620 27881733 -67390918 - B3A SINE B2 -69 129 1 9 797 864 154 24 31 chr17 27882063 27882252 -67390399 + B3 SINE B2 3 187 -8 9 797 1171 107 56 0 chr17 27882263 27882441 -67390210 + B2_Mm2 SINE B2 1 188 -7 9 797 1585 41 0 15 chr17 27882622 27882818 -67389833 - B2_Mm2 SINE B2 -1 194 2 9 797 329 243 191 35 chr17 27882993 27883108 -67389543 - ID_B1 SINE B4 -9 215 83 9 797 378 0 0 0 chr17 27883180 27883222 -67389429 + (CA)n Simple_repeat Simple_repeat 2 43 0 9 797 360 94 0 0 chr17 27883300 27883353 -67389298 + (TG)n Simple_repeat Simple_repeat 2 54 0 9 797 232 253 171 11 chr17 27885426 27885514 -67387137 - ID_B1 SINE B4 -18 206 105 9 797 278 270 342 68 chr17 27885853 27886072 -67386579 + B4A SINE B4 2 280 -12 9 797 280 317 67 9 chr17 27887146 27887251 -67385400 - PB1D7 SINE Alu -9 111 1 9 797 378 248 0 0 chr17 27888606 27888731 -67383920 + (CA)n Simple_repeat Simple_repeat 1 125 0 9 797 481 240 30 0 chr17 27891255 27891355 -67381296 + RSINE1 SINE B4 46 148 -17 9 797 242 241 0 18 chr17 27891593 27891648 -67381003 - B1F SINE Alu 0 149 96 9 797 378 319 136 12 chr17 27891675 27891837 -67380814 - B3A SINE B2 -16 182 1 9 797 366 78 20 0 chr17 27891920 27891971 -67380680 + B1_Mus1 SINE Alu 5 56 -92 9 797 216 111 0 0 chr17 27892191 27892227 -67380424 + (TG)n Simple_repeat Simple_repeat 2 37 0 9 797 203 215 0 15 chr17 27892248 27892314 -67380337 + GA-rich Low_complexity Low_complexity 1 65 0 9 797 559 198 0 59 chr17 27895935 27896053 -67376598 + PB1D9 SINE Alu 1 111 -9 9 797 26 0 0 0 chr17 27896268 27896294 -67376357 + AT_rich Low_complexity Low_complexity 1 26 0 9 797 311 311 163 6 chr17 27896307 27896492 -67376159 + B3A SINE B2 1 195 -3 9 797 234 250 11 116 chr17 27897343 27897438 -67375213 - RMER21B LTR ERV1 -218 624 540 9 797 265 251 12 11 chr17 27897622 27897704 -67374947 + B3 SINE B2 49 127 -66 9 797 252 252 252 0 chr17 27897792 27897891 -67374760 - B1_Mur1 SINE Alu -14 135 12 9 797 318 241 138 63 chr17 27897901 27898047 -67374604 - B1_Mus2 SINE Alu -1 149 2 9 797 260 323 55 0 chr17 27898555 27898682 -67373969 + L2 LINE L2 2935 3068 -351 9 797 533 218 0 198 chr17 27899276 27899361 -67373290 - B1_Mur3 SINE Alu -7 142 89 9 797 279 0 0 0 chr17 27899361 27899392 -67373259 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 797 533 218 0 198 chr17 27899392 27899483 -67373168 - B1_Mur3 SINE Alu -61 88 1 9 797 362 319 85 21 chr17 27899674 27899815 -67372836 + RSINE1 SINE B4 12 161 -4 9 797 228 314 0 14 chr17 27900897 27900968 -67371683 + MIRm SINE MIR 75 144 -132 9 797 556 220 172 45 chr17 27901134 27901291 -67371360 - B3A SINE B2 -14 184 8 9 797 358 265 255 0 chr17 27901332 27901434 -67371217 - RSINE1 SINE B4 -25 140 13 9 797 850 220 50 0 chr17 27901535 27901717 -67370934 - B3 SINE B2 -25 191 1 9 797 390 144 226 32 chr17 27901745 27901838 -67370813 - PB1D9 SINE Alu -1 119 9 9 797 1360 85 11 16 chr17 27902391 27902582 -67370069 + B2_Mm1t SINE B2 1 190 -3 9 797 318 119 511 21 chr17 27902806 27902900 -67369751 + B1_Mm SINE Alu 4 143 -4 9 797 351 65 0 0 chr17 27902900 27902946 -67369705 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 9 797 492 202 92 0 chr17 27902970 27903079 -67369572 - B3 SINE B2 -28 188 70 9 797 536 304 82 14 chr17 27903564 27903771 -67368880 + ID_B1 SINE B4 2 222 -2 9 797 221 267 0 16 chr17 27903801 27903862 -67368789 + B1F2 SINE Alu 2 61 -88 9 797 582 193 87 22 chr17 27905838 27905976 -67366675 - B3 SINE B2 -1 215 69 9 797 246 227 23 138 chr17 27905966 27906053 -67366598 + B1F1 SINE Alu 65 141 -8 9 797 637 130 0 0 chr17 27906499 27906591 -67366060 + B1_Mur4 SINE Alu 59 150 0 9 797 304 238 11 106 chr17 27906626 27906720 -67365931 - PB1D9 SINE Alu -11 109 25 9 797 640 274 88 23 chr17 27906891 27907108 -67365543 - B4A SINE B4 -6 286 56 9 797 227 294 130 14 chr17 27907549 27907618 -67365033 + ID4_ SINE ID 3 79 -4 9 797 1346 89 64 5 chr17 27908215 27908419 -67364232 + L1Md_F2 LINE L1 6367 6582 0 9 797 214 250 0 19 chr17 27908458 27908511 -67364140 + PB1D7 SINE Alu 49 100 -20 9 797 1044 160 193 0 chr17 27908976 27909157 -67363494 - B3 SINE B2 0 216 1 9 797 372 241 198 26 chr17 27909163 27909355 -67363296 + L1MD3 LINE L1 6745 6969 -1026 9 797 1088 76 0 7 chr17 27909574 27909719 -67362932 - B1_Mus1 SINE Alu 0 148 5 9 797 222 156 0 22 chr17 27909724 27909770 -67362881 - PB1D7 SINE Alu -1 119 75 9 797 547 178 76 23 chr17 27910517 27910649 -67362002 + B1_Mus2 SINE Alu 1 139 -8 9 797 249 33 0 0 chr17 27910649 27910679 -67361972 + (CAGC)n Simple_repeat Simple_repeat 2 31 0 9 797 285 217 29 0 chr17 27910765 27910834 -67361817 - L1MC1 LINE L1 -3 6330 6260 9 797 301 245 88 39 chr17 27911316 27911418 -67361233 - L1MCa LINE L1 -5129 1379 1273 9 797 408 279 132 6 chr17 27911482 27911641 -67361010 - B3A SINE B2 -18 180 2 9 797 341 348 0 69 chr17 27911891 27911906 -67360745 + ID SINE ID 69 73 -151 9 797 749 196 0 70 chr17 27911906 27912039 -67360612 + B1_Mus1 SINE Alu 4 128 -20 9 797 387 0 0 0 chr17 27912039 27912082 -67360569 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 797 383 165 165 0 chr17 27912373 27912464 -67360187 - B2_Mm2 SINE B2 -5 190 85 9 797 187 338 112 0 chr17 27913295 27913375 -67359276 - MIRb SINE MIR -66 202 114 9 797 454 212 0 0 chr17 27913790 27913870 -67358781 + ID_B1 SINE B4 135 214 -10 9 797 3954 135 98 13 chr17 27913905 27914602 -67358049 + RMER6A LTR ERVK 1 756 0 9 797 706 198 50 39 chr17 27914627 27914806 -67357845 + ORR1D1 LTR MaLR 10 190 -184 9 797 277 128 0 60 chr17 27914856 27914906 -67357745 + ORR1D1 LTR MaLR 167 213 -161 9 797 331 217 22 67 chr17 27915345 27915434 -67357217 - RSINE1 SINE B4 -59 106 22 9 797 198 0 0 0 chr17 27915436 27915458 -67357193 + (CAGC)n Simple_repeat Simple_repeat 2 23 0 9 797 633 221 76 0 chr17 27915479 27915610 -67357041 + B1_Mur1 SINE Alu 1 141 -8 9 797 355 314 43 31 chr17 27916365 27916526 -67356125 - RSINE1 SINE B4 0 165 3 9 797 1258 41 0 0 chr17 27916623 27916770 -67355881 + B1_Mus2 SINE Alu 1 147 0 9 797 207 100 0 0 chr17 27916770 27916800 -67355851 + (A)n Simple_repeat Simple_repeat 1 30 0 9 797 487 139 58 0 chr17 27917078 27917164 -67355487 + B1_Mur4 SINE Alu 60 150 0 9 797 478 146 30 50 chr17 27917702 27917803 -67354848 + B1_Mur2 SINE Alu 51 149 0 9 797 575 199 26 84 chr17 27917928 27918082 -67354569 + B1_Mur4 SINE Alu 5 149 -1 9 798 748 149 207 28 chr17 27918751 27918930 -67353721 + B3 SINE B2 6 216 0 9 798 363 229 8 146 chr17 27918925 27919048 -67353603 + MT2B LTR ERVL 152 257 -344 9 798 734 205 2 9 chr17 27918947 27919090 -67353561 + B1_Mur4 SINE Alu 5 146 -2 9 798 381 298 62 62 chr17 27919155 27919316 -67353335 - RSINE1 SINE B4 -2 163 3 9 798 228 324 14 0 chr17 27919387 27919461 -67353190 + MTE2b LTR MaLR 269 343 -36 9 798 494 245 13 52 chr17 27919619 27919774 -67352877 + B1_Mur3 SINE Alu 1 149 0 9 798 263 186 0 48 chr17 27919809 27919827 -67352824 + ID_B1 SINE B4 87 142 -79 9 798 264 146 0 0 chr17 27919827 27919868 -67352783 - YREP_Mm Unknown Unknown -1516 296 256 9 798 729 324 14 5 chr17 27919880 27920088 -67352563 + B3 SINE B2 1 210 -6 9 798 1113 35 0 53 chr17 27920309 27920446 -67352205 + B1_Mus2 SINE Alu 6 138 -9 9 798 282 29 0 0 chr17 27920446 27920481 -67352170 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 9 798 1113 35 0 53 chr17 27920481 27920493 -67352158 + B1_Mus2 SINE Alu 139 147 0 9 798 393 305 22 30 chr17 27920583 27920718 -67351933 + ID_B1 SINE B4 82 215 -9 9 798 398 193 110 0 chr17 27920738 27920847 -67351804 + B3 SINE B2 84 204 -12 9 798 23 33 0 0 chr17 27921306 27921336 -67351315 + AT_rich Low_complexity Low_complexity 1 30 0 9 798 1229 25 127 0 chr17 27922477 27922634 -67350017 + B2_Mm2 SINE B2 2 178 -17 9 798 238 340 37 50 chr17 27923363 27923524 -67349127 + RSINE1 SINE B4 2 160 -5 9 798 1308 7 0 20 chr17 27923802 27923952 -67348699 + B1_Mus2 SINE Alu 1 147 0 9 798 241 211 0 66 chr17 27923982 27924043 -67348608 - B1_Mur3 SINE Alu -13 136 80 9 798 414 300 159 34 chr17 27924142 27924318 -67348333 + B4 SINE B4 82 279 -13 9 798 1209 54 0 0 chr17 27924452 27924599 -67348052 - B1_Mus1 SINE Alu 0 148 2 9 798 724 134 62 0 chr17 27924833 27924945 -67347706 - B1_Mus2 SINE Alu 0 147 29 9 798 222 352 0 27 chr17 27925311 27925384 -67347267 + PB1 SINE Alu 38 108 -19 9 798 1038 23 102 29 chr17 27925394 27925531 -67347120 + B1_Mus1 SINE Alu 2 148 0 9 798 501 62 0 0 chr17 27926449 27926514 -67346137 + (TG)n Simple_repeat Simple_repeat 1 65 0 9 798 684 252 61 106 chr17 27926522 27926833 -67345818 + RLTR15 LTR ERVK 39 335 -24 9 798 405 0 0 0 chr17 27927340 27927385 -67345266 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 798 235 244 81 47 chr17 27928207 27928293 -67344358 + B1F1 SINE Alu 10 98 -51 1 798 299 159 62 16 chr17 27928339 27928403 -67344248 + PB1D9 SINE Alu 53 119 -1 1 798 413 295 40 39 chr17 27928408 27928628 -67344023 + RSINE1 SINE B4 7 223 -69 1 798 603 71 23 23 chr17 27928544 27928631 -67344020 + B1_Mus2 SINE Alu 59 145 -2 1 798 844 219 91 10 chr17 27928649 27928847 -67343804 + B3 SINE B2 1 214 -2 1 798 253 286 18 0 chr17 27928975 27929031 -67343620 + B1F2 SINE Alu 7 63 -86 1 798 1006 132 14 0 chr17 27929061 27929205 -67343446 + B1_Mus2 SINE Alu 1 146 -1 1 798 350 328 97 36 chr17 27929210 27929457 -67343194 + L1M4b LINE L1 2221 2482 -4852 1 798 615 113 41 0 chr17 27929782 27929879 -67342772 + B1_Mur4 SINE Alu 50 150 0 1 798 356 0 23 0 chr17 27929954 27929998 -67342653 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 798 253 293 52 29 chr17 27930214 27930318 -67342333 - PB1D7 SINE Alu 0 120 15 1 798 307 258 19 93 chr17 27930591 27930698 -67341953 + MT2B LTR ERVL 142 240 -361 1 798 672 139 164 0 chr17 27930622 27930744 -67341907 + B1_Mur4 SINE Alu 9 150 0 1 798 576 271 24 24 chr17 27931396 27931566 -67341085 - B3A SINE B2 -1 197 28 1 798 1234 48 0 0 chr17 27931591 27931738 -67340913 + B1_Mus2 SINE Alu 1 147 0 1 798 198 0 0 0 chr17 27931761 27931783 -67340868 + (A)n Simple_repeat Simple_repeat 1 22 0 1 798 339 322 29 106 chr17 27931783 27931797 -67340854 + B4 SINE B4 81 121 -171 1 798 492 229 0 92 chr17 27931797 27931917 -67340734 + B1_Mur2 SINE Alu 6 114 -35 1 798 339 322 29 106 chr17 27931917 27931953 -67340698 + B4 SINE B4 122 237 -55 1 798 333 263 2 2 chr17 27932003 27932084 -67340567 - RSINE1 SINE B4 -210 82 2 1 798 503 43 14 0 chr17 27932107 27932177 -67340474 + (TATG)n Simple_repeat Simple_repeat 2 72 0 1 798 308 219 133 0 chr17 27932581 27932686 -67339965 + PB1D7 SINE Alu 2 120 0 1 798 676 212 127 6 chr17 27932726 27932883 -67339768 + B3 SINE B2 34 209 -7 1 798 294 290 43 0 chr17 27932914 27933007 -67339644 + B4A SINE B4 1 97 -195 1 798 260 216 111 22 chr17 27933035 27933079 -67339572 + B4A SINE B4 182 235 -57 1 798 780 193 0 40 chr17 27933079 27933230 -67339421 + B1_Mur1 SINE Alu 2 146 -3 1 798 260 216 111 22 chr17 27933230 27933275 -67339376 + B4A SINE B4 236 278 -14 1 798 250 247 115 23 chr17 27933317 27933404 -67339247 + PB1D10 SINE Alu 14 108 -9 1 798 678 181 39 23 chr17 27934886 27935016 -67337635 + B1_Mm SINE Alu 10 141 -6 1 798 568 193 35 17 chr17 27935129 27935245 -67337406 - B1_Mur2 SINE Alu -5 144 27 1 798 343 178 13 52 chr17 27935237 27935314 -67337337 + PB1D10 SINE Alu 23 96 -21 1 798 422 298 13 60 chr17 27935379 27935529 -67337122 - RSINE1 SINE B4 -1 164 22 1 798 509 189 0 0 chr17 27935534 27935624 -67337027 + B3 SINE B2 2 91 -125 1 798 375 41 0 0 chr17 27935629 27935678 -67336973 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 798 586 267 0 44 chr17 27935740 27935877 -67336774 + ID_B1 SINE B4 81 211 -13 1 798 618 270 0 26 chr17 27935927 27936079 -67336572 + B1F SINE Alu 1 148 -1 1 798 392 310 36 60 chr17 27936091 27936259 -67336392 + RSINE1 SINE B4 2 165 0 1 798 1358 92 16 0 chr17 27936328 27936513 -67336138 + B2_Mm1t SINE B2 1 188 -5 1 798 207 0 0 0 chr17 27936592 27936615 -67336036 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 798 201 147 0 0 chr17 27936615 27936649 -67336002 + (A)n Simple_repeat Simple_repeat 1 34 0 1 798 732 194 28 0 chr17 27938104 27938248 -67334403 + B1_Mur1 SINE Alu 2 149 0 1 798 703 244 89 6 chr17 27938314 27938483 -67334168 + B3 SINE B2 27 209 -7 1 798 378 107 0 0 chr17 27938554 27938610 -67334041 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 798 306 324 199 0 chr17 27938610 27938746 -67333905 + RSINE1 SINE B4 3 165 0 1 798 251 330 138 0 chr17 27938814 27938923 -67333728 + RSINE1 SINE B4 23 146 -19 1 798 289 181 81 105 chr17 27939303 27939419 -67333232 + PB1D7 SINE Alu 11 119 -1 1 798 1388 59 47 31 chr17 27939475 27939667 -67332984 + B2_Mm2 SINE B2 1 195 0 1 798 203 312 0 25 chr17 27939745 27939824 -67332827 + GA-rich Low_complexity Low_complexity 3 79 0 1 798 245 211 17 50 chr17 27939884 27939944 -67332707 + PB1D10 SINE Alu 53 110 -7 1 798 636 61 99 20 chr17 27939967 27940068 -67332583 + B1_Mus1 SINE Alu 40 148 0 1 798 1881 185 72 45 chr17 27940132 27940534 -67332117 + MTC LTR MaLR 8 420 -1 1 798 810 186 87 10 chr17 27940808 27941003 -67331648 + B3 SINE B2 2 211 -5 1 798 307 273 0 49 chr17 27941036 27941117 -67331534 + B3 SINE B2 113 189 -27 1 798 217 217 22 0 chr17 27941146 27941192 -67331459 - B1F SINE Alu -7 142 96 1 798 261 390 66 15 chr17 27941166 27941364 -67331287 + ID_B1 SINE B4 11 218 -6 1 798 436 213 82 59 chr17 27941973 27942108 -67330543 + B1F2 SINE Alu 12 149 0 1 798 383 250 55 31 chr17 27942169 27942297 -67330354 + B1F2 SINE Alu 1 131 -18 1 798 225 0 0 0 chr17 27942324 27942349 -67330302 + (CAAGC)n Simple_repeat Simple_repeat 2 26 0 1 798 388 258 30 40 chr17 27942392 27942493 -67330158 + PB1D10 SINE Alu 10 109 -8 1 798 348 251 67 86 chr17 27942705 27942914 -67329737 + HAL1 LINE L1 1541 1745 -762 1 798 559 254 18 0 chr17 27943055 27943169 -67329482 - B1_Mur3 SINE Alu -32 117 2 1 798 274 271 22 119 chr17 27943169 27943184 -67329467 - MT2B LTR ERVL -329 267 152 1 798 333 251 57 21 chr17 27943190 27943334 -67329317 - B3 SINE B2 0 216 1 1 798 321 172 232 61 chr17 27943505 27943604 -67329047 + B1_Mur3 SINE Alu 14 129 -20 1 798 279 192 93 27 chr17 27943758 27943833 -67328818 + ID4 SINE ID 4 83 0 1 798 267 315 62 36 chr17 27944047 27944159 -67328492 + B3A SINE B2 79 193 -5 1 798 997 90 21 7 chr17 27944166 27944311 -67328340 + B1_Mus2 SINE Alu 1 147 0 1 798 183 155 0 79 chr17 27944316 27944379 -67328272 + A-rich Low_complexity Low_complexity 2 59 0 1 798 317 247 11 53 chr17 27944388 27944482 -67328169 + ID_B1 SINE B4 113 202 -22 1 798 353 252 50 10 chr17 27944724 27944824 -67327827 + PB1D7 SINE Alu 1 104 -16 1 798 477 252 50 131 chr17 27944847 27945007 -67327644 + B1_Mur1 SINE Alu 1 147 -2 1 798 766 246 80 45 chr17 27945389 27945589 -67327062 + B3 SINE B2 10 216 0 1 798 1033 133 0 13 chr17 27945881 27946033 -67326618 + B1_Mur4 SINE Alu 1 150 0 1 798 381 284 53 0 chr17 27947026 27947121 -67325530 + B3 SINE B2 106 205 -11 1 798 304 280 97 0 chr17 27947331 27947424 -67325227 + PB1D7 SINE Alu 1 102 -18 1 798 314 215 88 0 chr17 27948295 27948430 -67324221 + L1M LINE L1 5279 5427 -751 1 798 239 167 0 0 chr17 27948841 27948889 -67323762 + L1M LINE L1 5878 5925 -259 1 798 495 172 68 121 chr17 27949059 27949191 -67323460 + B1F2 SINE Alu 20 144 -5 1 798 354 264 56 107 chr17 27949535 27949713 -67322938 + B3A SINE B2 48 216 0 1 798 1243 98 40 17 chr17 27949825 27950001 -67322650 + B2_Mm2 SINE B2 2 181 -14 1 798 402 51 0 0 chr17 27950036 27950095 -67322556 + B2_Mm1a SINE B2 127 185 -8 1 798 31 0 0 0 chr17 27950095 27950126 -67322525 + AT_rich Low_complexity Low_complexity 1 31 0 1 798 966 125 0 0 chr17 27950174 27950310 -67322341 + B1_Mus1 SINE Alu 13 148 0 1 798 1016 99 43 0 chr17 27950330 27950471 -67322180 + B1_Mus2 SINE Alu 1 147 0 1 798 378 107 0 0 chr17 27950471 27950527 -67322124 + (A)n Simple_repeat Simple_repeat 1 56 0 1 798 471 292 28 9 chr17 27950536 27950643 -67322008 + RSINE1 SINE B4 1 109 -56 1 798 210 246 30 76 chr17 27950818 27950884 -67321767 + PB1D10 SINE Alu 42 104 -13 1 798 274 283 50 58 chr17 27950931 27951051 -67321600 + B3A SINE B2 75 193 -5 1 798 1240 34 0 7 chr17 27951144 27951292 -67321359 + B1_Mus2 SINE Alu 1 147 0 1 798 252 296 42 0 chr17 27951434 27951505 -67321146 - ID4_ SINE ID -4 79 6 1 798 223 250 221 0 chr17 27951555 27951623 -67321028 - ID_B1 SINE B4 -60 164 82 1 798 3627 10 2 0 chr17 27951855 27952250 -67320401 + MTA_Mm LTR MaLR 1 396 0 1 798 652 312 83 0 chr17 27952290 27952495 -67320156 + ID_B1 SINE B4 3 224 0 1 798 259 197 0 90 chr17 27952702 27952769 -67319882 + B1_Mur4 SINE Alu 84 144 -6 1 798 272 211 150 50 chr17 27952906 27952986 -67319665 - PB1 SINE Alu -3 124 37 1 798 667 222 14 0 chr17 27953023 27953167 -67319484 - B1_Mur2 SINE Alu 0 149 4 1 798 218 119 24 0 chr17 27953183 27953225 -67319426 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 798 1121 55 7 40 chr17 27953225 27953376 -67319275 - B1_Mus2 SINE Alu 0 147 2 1 798 316 243 28 14 chr17 27953473 27953544 -67319107 - ID4_ SINE ID -3 80 9 1 798 1444 78 21 0 chr17 27953661 27953852 -67318799 + B2_Mm2 SINE B2 1 195 0 1 798 456 212 17 35 chr17 27953887 27954002 -67318649 + PB1D9 SINE Alu 9 120 0 1 798 259 287 53 0 chr17 27954026 27954120 -67318531 + PB1D10 SINE Alu 18 116 -1 1 798 483 208 30 0 chr17 27954451 27954552 -67318099 - PB1D9 SINE Alu -2 118 15 1 798 273 245 261 9 chr17 27954456 27954567 -67318084 - ID_B1 SINE B4 -7 217 79 1 798 231 267 32 75 chr17 27954639 27954732 -67317919 + B4 SINE B4 80 168 -124 1 798 539 205 9 35 chr17 27954653 27954769 -67317882 + PB1D9 SINE Alu 6 118 -2 1 798 487 170 68 51 chr17 27954862 27954980 -67317671 - PB1D9 SINE Alu 0 120 1 1 798 322 176 0 0 chr17 27955154 27955205 -67317446 + PB1D7 SINE Alu 1 51 -69 1 798 261 225 47 49 chr17 27955205 27955240 -67317411 + ID_B1 SINE B4 97 172 -52 1 798 695 163 31 0 chr17 27955464 27955593 -67317058 - B1_Mur1 SINE Alu 0 149 17 1 798 25 0 0 0 chr17 27957328 27957353 -67315298 + GC_rich Low_complexity Low_complexity 1 25 0 1 798 222 91 0 0 chr17 27957441 27957474 -67315177 + (CCGCG)n Simple_repeat Simple_repeat 2 34 0 1 798 204 97 0 0 chr17 27957534 27957565 -67315086 + (CCG)n Simple_repeat Simple_repeat 3 33 0 1 798 242 280 143 71 chr17 27958375 27958529 -67314122 + B4A SINE B4 5 169 -123 1 798 342 215 114 0 chr17 27958482 27958561 -67314090 + PB1D9 SINE Alu 32 119 -1 1 798 345 273 71 47 chr17 27958979 27959106 -67313545 + ID_B1 SINE B4 77 206 -18 1 798 379 257 25 50 chr17 27959113 27959232 -67313419 + PB1D10 SINE Alu 1 116 -1 1 798 416 272 42 108 chr17 27959269 27959430 -67313221 + B1F SINE Alu 3 149 0 1 798 391 229 165 25 chr17 27959546 27959667 -67312984 - RSINE1 SINE B4 -25 140 3 1 798 1020 89 151 23 chr17 27959800 27959972 -67312679 + B2_Mm2 SINE B2 2 195 0 1 798 514 241 19 158 chr17 27959972 27960129 -67312522 - B1F2 SINE Alu -13 136 1 1 798 201 203 0 30 chr17 27960353 27960419 -67312232 + T-rich Low_complexity Low_complexity 4 67 0 1 798 212 125 42 0 chr17 27960370 27960418 -67312233 + (TTG)n Simple_repeat Simple_repeat 2 51 0 1 798 1148 62 7 0 chr17 27960420 27960565 -67312086 - B1_Mus1 SINE Alu -1 147 2 1 798 430 264 54 48 chr17 27960907 27961054 -67311597 + RSINE1 SINE B4 14 161 -4 1 798 461 319 16 38 chr17 27961075 27961209 -67311442 - PB1D10 SINE Alu -13 135 2 1 798 869 121 139 40 chr17 27961306 27961479 -67311172 - RMER16 LTR ERVK 0 533 344 1 798 333 67 32 53 chr17 27961586 27961680 -67310971 + T-rich Low_complexity Low_complexity 2 93 0 1 798 1212 48 7 0 chr17 27961689 27961834 -67310817 - B1_Mm SINE Alu 0 147 2 1 798 195 42 0 0 chr17 27961914 27961938 -67310713 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 798 275 299 0 0 chr17 27961981 27962048 -67310603 - B3A SINE B2 -94 104 38 1 798 1002 122 31 57 chr17 27962066 27962258 -67310393 + RMER4B LTR ERVK 85 271 -314 1 798 995 129 201 46 chr17 27962586 27962805 -67309846 + RMER4B LTR ERVK 333 585 0 1 798 1134 75 7 0 chr17 27962822 27962968 -67309683 - B1_Mus1 SINE Alu 0 148 2 1 798 603 159 114 60 chr17 27963581 27963748 -67308903 + B2_Mm2 SINE B2 1 176 -19 1 798 349 191 154 30 chr17 27963779 27963894 -67308757 + PB1D9 SINE Alu 23 147 -1 1 798 369 136 0 0 chr17 27963923 27963989 -67308662 + (GGGGA)n Simple_repeat Simple_repeat 3 68 0 1 798 1049 220 211 3 chr17 27964522 27964887 -67307764 - Lx9 LINE L1 -106 7538 7098 1 798 682 159 46 31 chr17 27965022 27965152 -67307499 - B1_Mus2 SINE Alu 0 147 16 1 798 330 280 64 92 chr17 27965152 27965195 -67307456 - ID_B1 SINE B4 0 224 57 1 798 3475 124 98 138 chr17 27965278 27966066 -67306585 - RMER6A LTR ERVK 0 756 1 1 798 214 250 0 0 chr17 27966564 27966604 -67306047 + B1_Mur4 SINE Alu 6 45 -105 1 798 276 316 0 0 chr17 27966624 27966703 -67305948 + ID4_ SINE ID 5 83 0 1 798 591 145 116 33 chr17 27966981 27967102 -67305549 + B1_Mus2 SINE Alu 5 135 -12 1 798 260 246 16 16 chr17 27967118 27967180 -67305471 - B3 SINE B2 -10 206 145 1 798 1189 41 0 20 chr17 27967215 27967364 -67305287 - B1_Mus2 SINE Alu 0 147 2 1 798 934 244 215 60 chr17 27967379 27967414 -67305237 + MT2A LTR ERVL 56 88 -445 1 798 1314 119 0 20 chr17 27967414 27967612 -67305039 - B2_Mm2 SINE B2 0 195 2 1 798 934 244 215 60 chr17 27967612 27967864 -67304787 + MT2A LTR ERVL 89 397 -136 1 798 1660 36 0 0 chr17 27967864 27968056 -67304595 - B2_Mm1a SINE B2 0 193 2 1 798 1180 53 96 45 chr17 27968060 27968238 -67304413 - B2_Mm2 SINE B2 -8 187 1 1 798 934 248 95 128 chr17 27968238 27968392 -67304259 + MT2A LTR ERVL 398 599 -2 1 798 623 308 83 77 chr17 27968392 27968714 -67303937 + MTD LTR MaLR 44 367 -52 1 798 605 264 48 30 chr17 27968793 27968961 -67303690 - ID_B1 SINE B4 -3 221 51 1 798 249 33 0 0 chr17 27969000 27969030 -67303621 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 798 1126 50 50 0 chr17 27969044 27969185 -67303466 - B1_Mus1 SINE Alu 0 148 1 1 798 229 70 70 0 chr17 27969187 27969230 -67303421 + (TTTA)n Simple_repeat Simple_repeat 1 46 0 1 798 721 193 14 0 chr17 27969239 27969379 -67303272 - B1_Mur3 SINE Alu -7 142 1 1 798 756 197 16 0 chr17 27969446 27969573 -67303078 - B1F2 SINE Alu -8 141 13 1 798 493 252 52 45 chr17 27969573 27969595 -67303056 - ID_B1 SINE B4 -3 216 67 1 798 696 271 53 0 chr17 27969758 27969928 -67302723 - ID_B1 SINE B4 -2 222 44 1 798 563 261 49 61 chr17 27969960 27970123 -67302528 - U1 snRNA snRNA -3 162 2 1 798 541 286 7 21 chr17 27970217 27970360 -67302291 + ID_B1 SINE B4 77 217 -7 1 798 627 170 12 171 chr17 27970372 27970542 -67302109 + B1_Mur4 SINE Alu 1 143 -7 1 798 406 308 122 5 chr17 27970634 27970856 -67301795 - L1M5 LINE L1 -438 5741 5494 1 798 620 214 42 57 chr17 27970874 27971092 -67301559 - B3A SINE B2 -2 193 2 1 798 278 160 19 39 chr17 27971178 27971230 -67301421 - RSINE1 SINE B4 -109 56 6 1 798 269 344 0 127 chr17 27971273 27971383 -67301268 - B1F2 SINE Alu -51 98 3 1 798 309 276 81 0 chr17 27971432 27971519 -67301132 - RSINE1 SINE B4 -21 144 51 1 798 583 213 91 49 chr17 27971573 27971689 -67300962 - B1F SINE Alu 0 149 26 1 798 2342 106 6 3 chr17 27971689 27972011 -67300640 + ORR1A2 LTR MaLR 5 327 0 1 798 583 213 91 49 chr17 27972011 27972037 -67300614 - B1F SINE Alu -124 25 1 1 798 1478 54 11 0 chr17 27972393 27972578 -67300073 + B2_Mm1t SINE B2 1 187 -6 1 798 1164 41 21 0 chr17 27972587 27972732 -67299919 + B1_Mus1 SINE Alu 1 148 0 1 798 579 261 158 20 chr17 27972818 27973064 -67299587 - B4 SINE B4 -12 280 1 1 798 331 308 27 45 chr17 27973070 27973182 -67299469 - B1F SINE Alu -3 146 37 1 798 210 342 71 44 chr17 27973386 27973499 -67299152 + MIR SINE MIR 25 140 -122 1 798 707 268 27 11 chr17 27974071 27974256 -67298395 - B3 SINE B2 -27 189 2 1 798 530 228 34 87 chr17 27974267 27974416 -67298235 - B1F2 SINE Alu -7 142 2 1 798 646 177 127 30 chr17 27974480 27974614 -67298037 - B1_Mur2 SINE Alu -2 147 1 1 798 183 42 0 0 chr17 27974636 27974660 -67297991 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1 798 1097 42 0 46 chr17 27974660 27974794 -67297857 - B1_Mm SINE Alu -3 144 17 1 798 4230 27 12 2 chr17 27974794 27975282 -67297369 + MT2_Mm LTR ERVL 1 493 0 1 798 1097 42 0 46 chr17 27975282 27975298 -67297353 - B1_Mm SINE Alu -131 16 1 1 798 710 147 93 0 chr17 27975302 27975431 -67297220 - B1_Mus2 SINE Alu -1 146 6 1 798 285 29 0 0 chr17 27975564 27975598 -67297053 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 798 261 0 0 0 chr17 27975608 27975637 -67297014 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 798 216 0 0 0 chr17 27975637 27975660 -67296991 + (GA)n Simple_repeat Simple_repeat 1 24 0 1 798 1253 41 0 7 chr17 27975871 27976020 -67296631 - B1_Mus1 SINE Alu 0 148 1 1 798 553 299 60 25 chr17 27976036 27976235 -67296416 - B3 SINE B2 -7 209 4 1 798 389 270 144 33 chr17 27976237 27976390 -67296261 - MIRb SINE MIR -57 211 42 1 798 1006 175 10 21 chr17 27976667 27976860 -67295791 + URR1B DNA MER1_type 20 210 -15 1 798 406 299 21 0 chr17 27977693 27977790 -67294861 + PB1D10 SINE Alu 15 113 -4 1 798 239 209 196 35 chr17 27978050 27978137 -67294514 + PB1D7 SINE Alu 13 119 -1 1 798 526 219 19 19 chr17 27978249 27978356 -67294295 - B1_Mur4 SINE Alu -43 107 1 1 798 446 194 36 27 chr17 27978362 27978473 -67294178 - PB1D9 SINE Alu -7 113 2 1 798 1301 27 0 0 chr17 27978549 27978695 -67293956 + B1_Mm SINE Alu 2 147 0 1 798 284 297 16 0 chr17 27978899 27978963 -67293688 + ID SINE ID 12 76 -148 1 798 357 271 62 54 chr17 27979730 27979749 -67292902 - B1F SINE Alu -6 143 14 1 798 432 278 9 18 chr17 27979749 27979859 -67292792 - ID_B1 SINE B4 -21 203 95 1 798 198 0 0 0 chr17 27979859 27979881 -67292770 + (T)n Simple_repeat Simple_repeat 1 22 0 1 798 417 266 18 0 chr17 27980013 27980122 -67292529 - PB1D9 SINE Alu -9 111 1 1 798 657 286 36 40 chr17 27980145 27980367 -67292284 - B4A SINE B4 -66 226 6 1 798 246 214 0 35 chr17 27980602 27980651 -67292000 + polypyrimidine Low_complexity Low_complexity 10 57 0 1 798 1238 48 0 0 chr17 27980651 27980797 -67291854 - B1_Mus2 SINE Alu 0 147 2 1 798 1298 116 26 0 chr17 27980806 27980996 -67291655 - B2_Mm2 SINE B2 0 195 1 1 798 398 244 15 11 chr17 27981171 27981276 -67291375 - PB1D10 SINE Alu 0 117 13 1 798 1215 48 14 0 chr17 27981444 27981589 -67291062 - B1_Mus2 SINE Alu 0 147 1 1 798 275 278 81 20 chr17 27981784 27981883 -67290768 - PB1 SINE Alu -19 108 4 1 798 635 188 88 29 chr17 27982401 27982538 -67290113 - B1_Mur3 SINE Alu 0 149 5 1 798 444 118 0 0 chr17 27982541 27982609 -67290042 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 798 289 319 21 21 chr17 27982896 27982911 -67289740 - PB1D7 SINE Alu 0 120 108 1 798 771 193 13 27 chr17 27982911 27983060 -67289591 - B1_Mus2 SINE Alu 0 147 1 1 798 289 307 0 65 chr17 27983060 27983152 -67289499 - PB1D7 SINE Alu -13 107 18 1 798 1038 147 75 99 chr17 27983734 27983825 -67288826 - B3 SINE B2 -9 207 106 1 798 1034 109 7 7 chr17 27983825 27983972 -67288679 + B1_Mus1 SINE Alu 2 148 0 1 798 1038 147 75 99 chr17 27983972 27984092 -67288559 - B3 SINE B2 -111 105 1 1 798 369 243 0 0 chr17 27984170 27984240 -67288411 - tRNA-Ala-GCY_ tRNA tRNA -1 74 5 1 798 1028 117 65 22 chr17 27984264 27984448 -67288203 - B2_Mm1t SINE B2 -1 192 1 1 798 218 212 0 18 chr17 27984508 27984574 -67288077 - B1_Mur3 SINE Alu -2 147 83 1 798 1244 28 14 0 chr17 27984617 27984762 -67287889 + B1_Mm SINE Alu 1 147 0 1 798 482 236 50 0 chr17 27985361 27985501 -67287150 - B1_Mur2 SINE Alu 0 149 3 1 798 347 221 32 23 chr17 27985625 27985723 -67286928 - PB1D9 SINE Alu -1 148 33 1 798 340 138 0 17 chr17 27986077 27986136 -67286515 - ORR1B1 LTR MaLR 0 394 337 1 798 533 196 7 4 chr17 27986138 27986273 -67286378 - ORR1B1 LTR MaLR -219 175 1 1 798 606 241 0 0 chr17 27986313 27986421 -67286230 - PB1D9 SINE Alu -12 108 1 1 798 1089 71 43 7 chr17 27986607 27986748 -67285903 - B1_Mus2 SINE Alu 0 147 2 1 798 255 346 48 9 chr17 27987247 27987352 -67285299 - PB1D10 SINE Alu -8 109 1 1 798 438 254 24 134 chr17 27987463 27987627 -67285024 - B1F1 SINE Alu 0 149 4 1 798 759 176 27 34 chr17 27987942 27988089 -67284562 + B1_Mur3 SINE Alu 2 147 -2 1 798 204 67 0 0 chr17 27988093 27988123 -67284528 + (CAAAA)n Simple_repeat Simple_repeat 4 33 0 1 798 525 176 106 19 chr17 27988386 27988490 -67284161 - B1_Mus2 SINE Alu -13 134 22 1 798 772 147 48 14 chr17 27989096 27989241 -67283410 - B1_Mur4 SINE Alu 0 150 1 1 798 224 333 41 116 chr17 27989254 27989400 -67283251 - ID_B1 SINE B4 -8 216 82 1 798 972 116 14 0 chr17 27989433 27989571 -67283080 + B1_Mur4 SINE Alu 9 148 -2 1 798 30 27 0 0 chr17 27989574 27989611 -67283040 + AT_rich Low_complexity Low_complexity 1 37 0 1 798 402 261 189 0 chr17 27989788 27989899 -67282752 - ID_B1 SINE B4 -13 211 80 1 798 207 100 0 0 chr17 27990002 27990032 -67282619 + (T)n Simple_repeat Simple_repeat 1 30 0 1 798 334 221 26 0 chr17 27990047 27990124 -67282527 - B4A SINE B4 -212 80 2 1 798 452 93 0 17 chr17 27990129 27990242 -67282409 - B2_Mm2 SINE B2 -2 193 47 1 798 1387 62 23 0 chr17 27990254 27990431 -67282220 - B2_Mm2 SINE B2 -14 181 1 1 798 266 47 0 44 chr17 27990445 27990490 -67282161 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 798 1153 37 0 0 chr17 27990492 27990626 -67282025 - B1_Mus1 SINE Alu -13 135 2 1 798 629 194 95 22 chr17 27990830 27990967 -67281684 + B1_Mus2 SINE Alu 1 147 0 1 798 341 194 429 0 chr17 27990996 27991120 -67281531 - B2_Mm2 SINE B2 -1 215 1 1 798 917 141 7 0 chr17 27991149 27991298 -67281353 + B2_Mm2 SINE B2 3 152 -43 1 798 357 326 0 0 chr17 27991298 27991390 -67281261 - ID_B1 SINE B4 -19 205 114 1 798 283 253 173 0 chr17 27991405 27991480 -67281171 - PB1D10 SINE Alu -3 114 27 1 798 827 170 7 45 chr17 27991496 27991650 -67281001 + B1_Mur3 SINE Alu 1 148 -1 1 798 453 255 48 160 chr17 27991677 27991717 -67280934 - ID_B1 SINE B4 -46 246 142 1 798 804 163 0 15 chr17 27991717 27991848 -67280803 - B1_Mur4 SINE Alu -8 142 14 1 798 230 306 39 110 chr17 27991744 27991898 -67280753 + ORR1A4 LTR MaLR 104 246 -83 1 798 453 255 48 160 chr17 27991848 27991877 -67280774 - ID_B1 SINE B4 -46 141 60 1 798 385 259 28 56 chr17 27991986 27992129 -67280522 + B1F2 SINE Alu 1 139 -10 1 798 1144 69 0 0 chr17 27992157 27992301 -67280350 - B1_Mus2 SINE Alu -3 144 1 1 798 712 243 82 6 chr17 27992325 27992507 -67280144 + B3A SINE B2 1 196 -2 1 798 694 23 0 22 chr17 27993078 27993167 -67279484 - B1_Mm SINE Alu 0 147 61 1 798 475 271 49 0 chr17 27993167 27993289 -67279362 - B1_Mur2 SINE Alu -12 137 10 1 798 385 222 116 36 chr17 27994867 27994979 -67277672 + B1F1 SINE Alu 9 129 -20 1 798 536 269 12 82 chr17 27995122 27995292 -67277359 - RSINE1 SINE B4 -4 161 4 1 798 250 231 133 80 chr17 27995297 27995308 -67277343 - PB1D7 SINE Alu -1 119 111 1 798 369 86 0 0 chr17 27995308 27995366 -67277285 + (TCTG)n Simple_repeat Simple_repeat 2 59 0 1 798 259 231 133 80 chr17 27995366 27995467 -67277184 - B1F SINE Alu -10 110 1 1 798 308 321 11 77 chr17 27995618 27995645 -67277006 - B4A SINE B4 -48 244 167 1 798 716 161 16 16 chr17 27995645 27995771 -67276880 - B1F2 SINE Alu -8 141 16 1 798 308 321 11 77 chr17 27995771 27995800 -67276851 - B4A SINE B4 -48 166 75 1 798 280 200 0 0 chr17 27995953 27996003 -67276648 - ID_B1 SINE B4 0 224 175 1 798 537 228 44 0 chr17 27996629 27996743 -67275908 + PB1D7 SINE Alu 1 119 -1 1 798 498 196 62 9 chr17 27997172 27997285 -67275366 + PB1D9 SINE Alu 1 119 -1 1 798 435 38 0 0 chr17 27997286 27997339 -67275312 + (TAA)n Simple_repeat Simple_repeat 1 53 0 1 798 218 291 74 0 chr17 27997932 27998049 -67274602 - MIRm SINE MIR -92 176 46 1 798 225 299 37 49 chr17 27998299 27998380 -67274271 - ID SINE ID -139 85 6 1 798 273 257 291 23 chr17 27998381 27998556 -67274095 - ID_B1 SINE B4 0 224 3 1 798 222 62 0 0 chr17 27998563 27998595 -67274056 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 1 798 718 280 115 33 chr17 27998682 27998952 -67273699 - B4 SINE B4 0 292 1 1 798 225 208 19 0 chr17 27999237 27999290 -67273361 - L1M5 LINE L1 -660 5513 5460 1 798 281 290 118 20 chr17 27999317 27999419 -67273232 + PB1D7 SINE Alu 1 112 -8 1 798 1122 73 0 19 chr17 27999846 28000000 -67272651 - B2_Mm2 SINE B2 -9 186 36 1 798 215 31 0 0 chr17 28000006 28000038 -67272613 - B3A SINE B2 -166 32 1 1 798 423 0 0 0 chr17 28000061 28000108 -67272543 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 798 293 239 22 11 chr17 28000161 28000250 -67272401 - RSINE1 SINE B4 -62 103 14 3 798 219 290 41 51 chr17 28000268 28000366 -67272285 - B1F SINE Alu -51 98 2 4 798 826 123 29 0 chr17 28000383 28000521 -67272130 - B1_Mur4 SINE Alu 0 150 9 5 798 353 223 26 88 chr17 28000427 28000540 -67272111 - MT2B LTR ERVL -344 257 152 6 798 535 278 129 10 chr17 28000607 28000800 -67271851 + B3 SINE B2 1 216 0 7 798 180 322 51 0 chr17 28001033 28001092 -67271559 + MIRc SINE MIR 83 144 -124 8 798 309 217 118 36 chr17 28001204 28001314 -67271337 - PB1D7 SINE Alu -1 119 1 9 798 245 250 111 0 chr17 28001331 28001403 -67271248 - U6 snRNA snRNA 0 107 28 1 798 532 156 11 0 chr17 28001404 28001494 -67271157 + B1_Mus2 SINE Alu 50 140 -7 1 798 188 79 0 50 chr17 28001498 28001538 -67271113 + (CAAAAA)n Simple_repeat Simple_repeat 4 41 0 1 798 476 285 41 14 chr17 28001562 28001708 -67270943 - RSINE1 SINE B4 -13 152 3 1 798 374 338 27 67 chr17 28001769 28001994 -67270657 - B4A SINE B4 0 292 77 1 798 774 236 156 84 chr17 28002116 28002158 -67270493 - ORR1D1 LTR MaLR 0 374 338 1 798 953 89 30 0 chr17 28002158 28002293 -67270358 + B1_Mus2 SINE Alu 3 141 -6 1 798 774 236 156 84 chr17 28002293 28002597 -67270054 - ORR1D1 LTR MaLR -37 337 3 1 798 255 202 17 79 chr17 28002943 28003184 -67269467 + (TG)n Simple_repeat Simple_repeat 1 226 0 1 798 211 239 14 56 chr17 28003342 28003413 -67269238 - PB1D10 SINE Alu -10 107 40 1 798 25 0 0 0 chr17 28003545 28003570 -67269081 + AT_rich Low_complexity Low_complexity 1 25 0 1 798 706 45 0 0 chr17 28003573 28003662 -67268989 - B1_Mus2 SINE Alu -5 142 54 2 798 516 221 33 0 chr17 28003928 28004050 -67268601 + B3 SINE B2 86 211 -5 2 798 944 193 39 24 chr17 28004153 28004360 -67268291 - B3 SINE B2 -6 210 1 2 798 405 266 125 0 chr17 28004691 28004819 -67267832 + B1F SINE Alu 1 144 -5 2 798 439 266 17 52 chr17 28004835 28004950 -67267701 + ID_B1 SINE B4 102 212 -12 2 798 690 261 83 42 chr17 28004971 28005211 -67267440 - B4A SINE B4 -36 256 7 2 798 252 300 0 0 chr17 28005334 28005394 -67267257 + ID_B1 SINE B4 165 224 0 2 798 967 103 0 0 chr17 28005715 28005851 -67266800 - B1_Mus1 SINE Alu -1 147 12 2 798 558 231 7 59 chr17 28005851 28005867 -67266784 - ID_B1 SINE B4 -1 223 80 2 798 563 278 75 13 chr17 28006137 28006363 -67266288 + L1MB8 LINE L1 5910 6149 -29 2 798 514 163 35 0 chr17 28006506 28006592 -67266059 + ID_B1 SINE B4 126 214 -10 3 798 749 250 145 25 chr17 28006751 28007018 -67265633 + ORR1D1 LTR MaLR 1 298 -76 3 798 528 194 30 37 chr17 28007235 28007369 -67265282 + B3 SINE B2 80 212 -4 3 798 305 233 196 30 chr17 28007369 28007389 -67265262 - L1M4 LINE L1 -3240 2906 2879 3 798 1175 43 0 0 chr17 28007389 28007530 -67265121 - B1_Mm SINE Alu -6 141 1 3 798 305 233 196 30 chr17 28007530 28007642 -67265009 - L1M4 LINE L1 -3268 2878 2752 3 798 902 235 30 0 chr17 28007647 28007847 -67264804 - B3 SINE B2 0 216 11 3 798 240 342 52 9 chr17 28007856 28007971 -67264680 - L1M4 LINE L1 -3375 2771 2652 3 798 367 157 36 12 chr17 28008147 28008231 -67264420 - ORR1D1 LTR MaLR 0 374 289 3 798 550 182 37 22 chr17 28008212 28008347 -67264304 - B3 SINE B2 0 216 80 3 798 429 278 7 63 chr17 28008692 28008834 -67263817 + ID_B1 SINE B4 86 219 -5 3 798 369 211 9 56 chr17 28009467 28009577 -67263074 - B1_Mur1 SINE Alu -1 148 20 3 798 326 221 0 0 chr17 28009932 28010000 -67262651 - BC1_Mm scRNA scRNA -84 68 1 4 798 212 316 13 26 chr17 28010338 28010416 -67262235 - ID4_ SINE ID -1 82 6 4 798 421 250 18 0 chr17 28010507 28010619 -67262032 + PB1D10 SINE Alu 3 116 -1 4 798 795 128 180 18 chr17 28010738 28010905 -67261746 + B2_Mm2 SINE B2 2 195 0 4 798 509 268 28 23 chr17 28010930 28011110 -67261541 - B3A SINE B2 -2 214 29 4 798 217 227 89 51 chr17 28011527 28011606 -67261045 + B1F1 SINE Alu 5 86 -63 4 798 1105 83 0 0 chr17 28012007 28012152 -67260499 - B1_Mus2 SINE Alu -2 145 1 4 798 737 115 123 0 chr17 28012208 28012338 -67260313 - B1_Mus1 SINE Alu 0 148 3 4 798 1180 167 23 0 chr17 28012339 28012555 -67260096 + RLTR17 LTR ERVK 440 660 -32 4 798 25 0 0 0 chr17 28012698 28012723 -67259928 + AT_rich Low_complexity Low_complexity 1 25 0 4 798 559 208 51 22 chr17 28012745 28012920 -67259731 - B3A SINE B2 -9 207 33 5 798 1297 80 32 0 chr17 28012920 28013107 -67259544 - B2_Mm2 SINE B2 -1 194 2 5 798 458 273 42 88 chr17 28013107 28013148 -67259503 - B3 SINE B2 -184 32 1 5 798 441 145 252 17 chr17 28013950 28014069 -67258582 - B1_Mus1 SINE Alu 0 148 2 5 798 23 0 0 0 chr17 28014082 28014105 -67258546 + AT_rich Low_complexity Low_complexity 1 23 0 5 798 223 234 21 0 chr17 28014382 28014429 -67258222 + (CGGG)n Simple_repeat Simple_repeat 3 50 0 5 798 342 164 0 32 chr17 28014429 28014492 -67258159 - PB1D10 SINE Alu -14 103 43 5 798 372 238 73 32 chr17 28014821 28014944 -67257707 - ID_B1 SINE B4 -23 201 75 5 798 252 194 16 16 chr17 28015235 28015274 -67257377 + T-rich Low_complexity Low_complexity 26 65 0 5 798 496 143 250 0 chr17 28015274 28015386 -67257265 - B1_Mur1 SINE Alu -6 143 4 5 798 252 194 16 16 chr17 28015386 28015409 -67257242 + T-rich Low_complexity Low_complexity 4 25 0 5 798 352 273 86 7 chr17 28015424 28015519 -67257132 + B4A SINE B4 1 103 -189 6 798 243 0 0 0 chr17 28015519 28015546 -67257105 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 798 352 273 86 7 chr17 28015546 28015601 -67257050 + B4A SINE B4 104 163 -129 6 798 376 228 13 0 chr17 28015587 28015666 -67256985 - B1F2 SINE Alu -61 88 9 6 798 246 256 89 0 chr17 28015590 28015680 -67256971 - B4A SINE B4 -122 170 73 6 798 352 207 269 34 chr17 28015860 28016035 -67256616 + B3 SINE B2 1 216 0 6 798 218 200 0 0 chr17 28018075 28018115 -67254536 + (TCTG)n Simple_repeat Simple_repeat 2 41 0 6 798 288 77 0 0 chr17 28018121 28018160 -67254491 + (TC)n Simple_repeat Simple_repeat 1 39 0 6 798 361 168 190 138 chr17 28018163 28018342 -67254309 - B3 SINE B2 -1 197 1 6 798 189 244 67 0 chr17 28018865 28018910 -67253741 + MER5A DNA MER1_type 142 189 0 6 798 645 180 0 0 chr17 28019087 28019198 -67253453 + PB1D9 SINE Alu 2 112 -8 6 798 2670 58 3 14 chr17 28019335 28019701 -67252950 - L1_Mus1 LINE L1 0 6567 6206 7 798 441 255 47 0 chr17 28020398 28020504 -67252147 + PB1D7 SINE Alu 6 116 -4 7 798 373 293 0 49 chr17 28020548 28020670 -67251981 + ID_B1 SINE B4 105 220 -4 7 798 258 264 140 23 chr17 28020664 28020835 -67251816 + MER106B DNA MER1_type 743 933 -126 7 798 246 246 0 58 chr17 28020818 28020887 -67251764 + B3A SINE B2 7 71 -127 7 798 434 188 9 90 chr17 28022613 28022724 -67249927 + ID_B1 SINE B4 121 222 -2 7 798 180 0 0 0 chr17 28024959 28024979 -67247672 + (TCCC)n Simple_repeat Simple_repeat 2 21 0 7 798 24 0 0 0 chr17 28024979 28025003 -67247648 + AT_rich Low_complexity Low_complexity 1 24 0 7 798 780 192 19 20 chr17 28025500 28025697 -67246954 - B3 SINE B2 -4 191 2 7 798 303 71 0 0 chr17 28025713 28025755 -67246896 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 798 288 0 0 0 chr17 28025794 28025826 -67246825 + (TG)n Simple_repeat Simple_repeat 1 32 0 7 798 342 0 0 0 chr17 28025865 28025903 -67246748 + (TG)n Simple_repeat Simple_repeat 1 38 0 7 798 430 316 82 29 chr17 28025915 28026159 -67246492 - B4A SINE B4 -35 257 1 8 798 284 238 71 12 chr17 28027359 28027444 -67245207 - PB1D10 SINE Alu -27 90 1 8 798 207 162 0 0 chr17 28027574 28027611 -67245040 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 8 798 353 346 31 36 chr17 28027647 28027663 -67244988 - B2_Mm2 SINE B2 0 195 180 8 798 961 74 44 7 chr17 28027663 28027799 -67244852 - B1_Mus1 SINE Alu -7 141 1 8 798 494 276 28 14 chr17 28027799 28027977 -67244674 - B3 SINE B2 -16 179 2 8 798 210 118 0 0 chr17 28028055 28028089 -67244562 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 798 972 168 46 16 chr17 28028090 28028284 -67244367 - B3 SINE B2 -14 202 3 8 798 333 294 100 2 chr17 28028797 28028984 -67243667 - L1M2 LINE L1 -546 5751 5543 8 798 817 98 90 8 chr17 28029056 28029189 -67243462 - B1_Mur4 SINE Alu -6 144 1 8 798 447 265 170 18 chr17 28029255 28029420 -67243231 - B3A SINE B2 -8 190 1 8 798 423 0 0 0 chr17 28029431 28029478 -67243173 + (TTA)n Simple_repeat Simple_repeat 2 48 0 9 798 1108 112 27 32 chr17 28029478 28029663 -67242988 - B2_Mm2 SINE B2 -11 184 1 9 798 414 269 44 7 chr17 28030771 28030906 -67241745 - B1F SINE Alu -3 146 7 9 798 322 340 0 0 chr17 28031999 28032096 -67240555 + RSINE1 SINE B4 69 165 0 9 798 189 139 0 0 chr17 28034821 28034864 -67237787 + (CAA)n Simple_repeat Simple_repeat 2 44 0 9 798 258 193 33 50 chr17 28037037 28037097 -67235554 - PB1D10 SINE Alu -7 110 52 9 798 441 273 7 92 chr17 28037118 28037271 -67235380 + ID_B1 SINE B4 32 171 -53 9 798 404 293 76 108 chr17 28037288 28037437 -67235214 - B3A SINE B2 -7 191 46 9 798 1209 34 0 0 chr17 28037437 28037584 -67235067 - B1_Mus2 SINE Alu 0 147 1 9 798 302 293 76 113 chr17 28037584 28037626 -67235025 - B3 SINE B2 -170 46 1 9 798 429 200 75 9 chr17 28037676 28037782 -67234869 + B1_Mur1 SINE Alu 30 142 -7 9 798 455 181 0 12 chr17 28037810 28037911 -67234740 + B1_Mur2 SINE Alu 49 149 0 1 798 895 133 7 7 chr17 28037939 28038083 -67234568 + B1_Mus1 SINE Alu 5 148 0 1 798 812 136 14 35 chr17 28038861 28039006 -67233645 + B1_Mur3 SINE Alu 1 142 -7 1 798 562 251 67 28 chr17 28039658 28039838 -67232813 + B3A SINE B2 2 188 -10 1 798 300 111 0 0 chr17 28039993 28040038 -67232613 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 798 342 244 36 12 chr17 28040491 28040574 -67232077 - ID_B1 SINE B4 -58 166 82 1 798 447 276 52 52 chr17 28040653 28040806 -67231845 - RSINE1 SINE B4 -12 153 1 1 798 493 278 52 0 chr17 28040846 28041019 -67231632 - B3A SINE B2 -16 182 1 1 798 1202 41 0 0 chr17 28041384 28041531 -67231120 + B1_Mm SINE Alu 1 147 0 1 798 237 33 0 0 chr17 28041531 28041561 -67231090 + (A)n Simple_repeat Simple_repeat 1 30 0 1 798 327 346 15 23 chr17 28041839 28041972 -67230679 - RSINE1 SINE B4 0 165 34 1 798 337 286 24 97 chr17 28042018 28042142 -67230509 + PB1D10 SINE Alu 3 117 0 1 798 1123 83 0 0 chr17 28042564 28042709 -67229942 + B1_Mus1 SINE Alu 2 146 -2 1 798 208 167 24 0 chr17 28042710 28042752 -67229899 + (CAAA)n Simple_repeat Simple_repeat 1 43 0 1 798 30 0 0 0 chr17 28042988 28043018 -67229633 + AT_rich Low_complexity Low_complexity 1 30 0 1 798 730 159 14 21 chr17 28043018 28043159 -67229492 - B1_Mur3 SINE Alu -9 140 1 1 798 767 237 29 34 chr17 28043268 28043473 -67229178 + B3 SINE B2 5 208 -8 1 798 681 164 77 15 chr17 28043793 28043923 -67228728 + B1_Mus1 SINE Alu 2 139 -9 1 798 440 143 18 37 chr17 28043923 28044032 -67228619 + GA-rich Low_complexity Low_complexity 1 107 0 1 798 981 196 34 0 chr17 28045407 28045611 -67227040 - B3 SINE B2 -3 213 3 1 798 685 221 0 26 chr17 28045640 28045793 -67226858 - B1_Mur1 SINE Alu 0 149 1 1 798 23 0 0 0 chr17 28046195 28046218 -67226433 + GC_rich Low_complexity Low_complexity 1 23 0 1 798 251 82 0 58 chr17 28046501 28046553 -67226098 + (CGG)n Simple_repeat Simple_repeat 1 49 0 1 798 211 238 111 0 chr17 28047547 28047610 -67225041 + L2a LINE L2 3353 3422 -4 1 798 874 242 67 50 chr17 28047644 28047844 -67224807 - B4A SINE B4 0 292 86 1 798 297 0 0 0 chr17 28047844 28047877 -67224774 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 798 874 242 67 50 chr17 28047877 28047959 -67224692 - B4A SINE B4 -207 85 5 1 798 2359 110 67 22 chr17 28048319 28048720 -67223931 - MTC LTR MaLR -2 419 1 1 798 923 134 41 41 chr17 28049066 28049261 -67223390 - B2_Mm2 SINE B2 0 195 1 1 799 666 253 0 0 chr17 28049648 28049798 -67222853 - B4 SINE B4 -141 151 2 1 799 1201 196 136 8 chr17 28050033 28050347 -67222304 + MTD LTR MaLR 3 388 -31 1 799 212 284 126 54 chr17 28050556 28050720 -67221931 + MIRc SINE MIR 26 200 -68 1 799 491 259 21 49 chr17 28050828 28050970 -67221681 - ID_B1 SINE B4 -1 223 86 1 799 1403 39 6 22 chr17 28052033 28052215 -67220436 - B2_Mm1a SINE B2 -14 179 1 1 799 1142 62 0 0 chr17 28052318 28052464 -67220187 - B1_Mm SINE Alu -1 146 1 1 799 263 243 39 51 chr17 28052692 28052770 -67219881 - ID4_ SINE ID -2 81 5 1 799 857 184 52 36 chr17 28052789 28052981 -67219670 - B3 SINE B2 -21 195 1 1 799 594 99 98 10 chr17 28053293 28053395 -67219256 - B1_Mm SINE Alu 0 147 37 1 799 715 145 26 0 chr17 28054629 28054746 -67217905 - B1_Mur2 SINE Alu -26 123 4 1 799 358 241 8 89 chr17 28054638 28054761 -67217890 - MT2B LTR ERVL -337 264 152 1 799 1486 154 208 23 chr17 28054853 28055204 -67217447 + MTD LTR MaLR 3 418 -1 1 799 361 81 284 0 chr17 28055406 28055480 -67217171 - B1_Mur2 SINE Alu -1 148 54 1 799 261 146 0 0 chr17 28055510 28055558 -67217093 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 799 690 270 44 35 chr17 28055855 28056058 -67216593 - B3 SINE B2 -1 215 11 1 799 201 74 0 0 chr17 28056086 28056113 -67216538 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 1 799 836 131 14 28 chr17 28056113 28056244 -67216407 - B1_Mm SINE Alu -8 139 7 1 799 241 200 0 0 chr17 28056246 28056291 -67216360 - L1MA6 LINE L1 -22 6278 6234 1 799 198 71 0 0 chr17 28056701 28056729 -67215922 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 799 755 186 0 0 chr17 28056757 28056886 -67215765 - B1_Mur2 SINE Alu -2 147 19 1 799 190 0 0 62 chr17 28056889 28056921 -67215730 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1 799 1282 41 0 0 chr17 28056921 28057068 -67215583 - B1_Mus1 SINE Alu 0 148 2 1 799 393 279 86 47 chr17 28057080 28057208 -67215443 - RSINE1 SINE B4 -19 146 14 1 799 249 284 14 0 chr17 28057230 28057304 -67215347 + ID4_ SINE ID 2 76 -7 1 799 318 240 71 107 chr17 28057690 28057712 -67214939 - PB1D10 SINE Alu -1 116 9 1 799 398 211 89 0 chr17 28057712 28057802 -67214849 - ID_B1 SINE B4 -37 187 90 1 799 221 289 93 37 chr17 28058131 28058239 -67214412 - MIRb SINE MIR -92 176 63 1 799 297 0 0 0 chr17 28059899 28059932 -67212719 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 799 411 287 25 42 chr17 28059932 28060052 -67212599 - B1F SINE Alu -27 122 5 1 799 288 338 13 13 chr17 28060345 28060423 -67212228 - RSINE1 SINE B4 -6 159 82 1 799 943 144 108 0 chr17 28060459 28060626 -67212025 - URR1A DNA MER1_type 0 226 42 1 799 355 228 202 66 chr17 28060707 28060890 -67211761 - B3 SINE B2 -5 211 4 1 799 292 301 145 0 chr17 28061019 28061102 -67211549 + B1F SINE Alu 4 98 -51 1 799 843 229 59 0 chr17 28061128 28061298 -67211353 + B3 SINE B2 27 206 -10 1 799 2207 138 59 20 chr17 28061337 28061729 -67210922 + MTB_Mm LTR MaLR 1 407 0 1 799 260 185 139 97 chr17 28061732 28061804 -67210847 - tRNA-Leu-TTA tRNA tRNA 0 86 12 1 799 615 234 8 0 chr17 28061876 28062000 -67210651 + ID_B1 SINE B4 92 216 -8 1 799 227 167 60 40 chr17 28061958 28062008 -67210643 + PB1D10 SINE Alu 65 115 -2 1 799 256 113 57 0 chr17 28062035 28062088 -67210563 + GA-rich Low_complexity Low_complexity 4 59 0 1 799 681 235 46 0 chr17 28062872 28063025 -67209626 - B3 SINE B2 -56 160 1 1 799 351 227 40 0 chr17 28063036 28063111 -67209540 + ID4 SINE ID 3 80 -3 1 799 546 189 11 0 chr17 28064340 28064435 -67208216 - B1_Mur2 SINE Alu -52 97 2 1 799 743 174 80 106 chr17 28064937 28065136 -67207515 + B3A SINE B2 1 194 -4 1 799 884 145 23 0 chr17 28065146 28065277 -67207374 + B1_Mm SINE Alu 1 134 -13 1 799 396 0 0 0 chr17 28065347 28065391 -67207260 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1 799 1347 32 0 0 chr17 28065391 28065549 -67207102 - B2_Mm1t SINE B2 -35 158 1 1 799 543 254 68 58 chr17 28066475 28066680 -67205971 - B3 SINE B2 -8 208 2 1 799 939 278 27 34 chr17 28066906 28067200 -67205451 - B4A SINE B4 0 292 1 1 799 904 211 92 0 chr17 28067202 28067387 -67205264 - ID_B1 SINE B4 -22 202 1 1 799 222 200 25 0 chr17 28067399 28067439 -67205212 - PB1D7 SINE Alu -12 108 68 1 799 307 0 23 23 chr17 28067588 28067632 -67205019 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 799 695 66 292 0 chr17 28067632 28067738 -67204913 - B1_Mus1 SINE Alu -10 138 2 1 799 679 203 7 52 chr17 28067950 28068085 -67204566 + B1_Mur4 SINE Alu 1 129 -21 1 799 1011 214 0 62 chr17 28068109 28068333 -67204318 + B3 SINE B2 1 210 -6 1 799 571 187 56 0 chr17 28068550 28068657 -67203994 - B1_Mus1 SINE Alu -35 113 1 1 799 358 265 50 17 chr17 28068553 28068672 -67203979 - ID_B1 SINE B4 -35 189 67 1 799 464 314 7 22 chr17 28069077 28069214 -67203437 - RSINE1 SINE B4 -28 137 3 1 799 806 179 157 15 chr17 28069372 28069570 -67203081 + URR1A DNA MER1_type 1 226 0 1 799 216 261 0 0 chr17 28069747 28069793 -67202858 + CT-rich Low_complexity Low_complexity 1 46 0 1 799 269 210 111 0 chr17 28069793 28069874 -67202777 - PB1D10 SINE Alu -6 111 22 1 799 849 274 109 4 chr17 28069955 28070212 -67202439 + B4A SINE B4 1 284 -8 1 799 727 175 47 81 chr17 28070488 28070637 -67202014 - B1_Mur4 SINE Alu -1 149 6 1 799 509 313 48 0 chr17 28070671 28070818 -67201833 - RSINE1 SINE B4 -8 157 4 1 799 681 45 0 64 chr17 28070850 28070944 -67201707 - B1_Mur4 SINE Alu -1 149 62 1 799 2626 124 43 2 chr17 28072088 28072484 -67200167 - MTC LTR MaLR -8 413 2 1 799 450 36 0 0 chr17 28072669 28072725 -67199926 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 799 328 321 75 9 chr17 28073034 28073141 -67199510 - B1F SINE Alu -18 131 18 1 799 1004 38 114 0 chr17 28073170 28073302 -67199349 + B1_Mus2 SINE Alu 1 147 0 1 799 210 105 0 0 chr17 28073304 28073342 -67199309 + (TTAA)n Simple_repeat Simple_repeat 1 38 0 1 799 191 36 0 35 chr17 28074505 28074534 -67198117 + (CACCC)n Simple_repeat Simple_repeat 5 32 0 1 799 284 278 14 6 chr17 28074819 28074907 -67197744 + ID4 SINE ID 17 103 -49 1 799 243 263 0 17 chr17 28075894 28075952 -67196699 + PB1D10 SINE Alu 33 89 -28 1 799 321 109 0 0 chr17 28076229 28076284 -67196367 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 799 324 0 0 0 chr17 28076284 28076319 -67196332 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 799 606 234 57 0 chr17 28076830 28076971 -67195680 - B1_Mur3 SINE Alu 0 149 1 2 799 495 0 0 0 chr17 28078481 28078536 -67194115 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 799 543 241 43 7 chr17 28079353 28079491 -67193160 - RSINE1 SINE B4 -21 144 2 2 799 901 126 49 0 chr17 28079786 28079929 -67192722 + B1_Mur4 SINE Alu 1 150 0 2 799 1487 68 21 0 chr17 28080053 28080243 -67192408 + B2_Mm2 SINE B2 2 195 0 2 799 408 227 0 13 chr17 28080334 28080410 -67192241 - ID4_ SINE ID -6 77 3 2 799 1227 55 0 0 chr17 28080483 28080629 -67192022 + B1_Mus2 SINE Alu 2 147 0 2 799 246 62 0 0 chr17 28080629 28080661 -67191990 + (A)n Simple_repeat Simple_repeat 1 32 0 2 799 343 277 91 14 chr17 28081014 28081157 -67191494 - L1M LINE L1 -543 5631 5478 2 799 1085 86 14 0 chr17 28081190 28081330 -67191321 - B1_Mus1 SINE Alu -4 144 3 2 799 1231 91 91 0 chr17 28081382 28081558 -67191093 - B2_Mm1a SINE B2 -1 192 1 2 799 297 75 0 0 chr17 28081571 28081611 -67191040 + (T)n Simple_repeat Simple_repeat 1 40 0 2 799 875 32 30 82 chr17 28081611 28081746 -67190905 - B1_Mus1 SINE Alu 0 148 21 2 799 310 240 169 96 chr17 28081661 28081827 -67190824 - MT2B2 LTR ERVL -327 257 80 2 799 262 305 11 58 chr17 28081759 28081846 -67190805 - PB1 SINE Alu -20 107 25 2 799 346 270 42 42 chr17 28081884 28082027 -67190624 - L1M LINE L1 -765 5419 5277 2 799 323 266 0 25 chr17 28082400 28082481 -67190170 + ID4 SINE ID 3 81 -2 2 799 348 83 0 0 chr17 28083296 28083344 -67189307 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 799 912 138 51 0 chr17 28083685 28083823 -67188828 + B1_Mus2 SINE Alu 3 147 0 2 799 988 149 0 7 chr17 28083901 28084050 -67188601 - B1_Mur3 SINE Alu 0 149 2 2 799 276 242 30 0 chr17 28084080 28084146 -67188505 + ID4 SINE ID 2 69 -14 2 799 201 94 0 0 chr17 28084584 28084616 -67188035 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 799 431 121 76 0 chr17 28084667 28084733 -67187918 - BC1_Mm scRNA scRNA -80 72 2 2 799 292 252 155 16 chr17 28084734 28084863 -67187788 - B4A SINE B4 -62 230 84 2 799 584 302 47 0 chr17 28084889 28085038 -67187613 - RSINE1 SINE B4 -4 161 6 2 799 340 244 13 0 chr17 28085062 28085140 -67187511 - B4A SINE B4 -211 81 3 2 799 875 254 3 33 chr17 28085461 28085645 -67187006 - B3A SINE B2 0 216 38 2 799 2028 171 77 3 chr17 28085645 28086009 -67186642 - ORR1B1 LTR MaLR 0 394 4 2 799 875 247 0 27 chr17 28086009 28086050 -67186601 - B3A SINE B2 -160 38 1 2 799 306 214 0 160 chr17 28086154 28086254 -67186397 + PB1D9 SINE Alu 3 86 -34 2 799 333 290 29 29 chr17 28086528 28086631 -67186020 + Tigger7 DNA MER2_type 29 131 -2360 2 799 1743 16 0 0 chr17 28086843 28087035 -67185616 - B2_Mm1a SINE B2 -1 192 1 2 799 782 176 0 0 chr17 28087731 28087862 -67184789 - B1_Mus2 SINE Alu -12 135 5 2 799 408 130 0 0 chr17 28087869 28087938 -67184713 + (TC)n Simple_repeat Simple_repeat 2 70 0 2 799 932 119 106 12 chr17 28087958 28088128 -67184523 - B2_Mm2 SINE B2 -7 188 3 2 799 686 316 21 40 chr17 28088521 28088847 -67183804 - RCHARR1 DNA MER1_type 0 974 655 2 799 1206 75 0 0 chr17 28088868 28089015 -67183636 - B1_Mm SINE Alu 0 147 1 2 799 328 306 113 45 chr17 28089369 28089689 -67182962 + L1_Mur3 LINE L1 4052 4435 -1708 2 799 323 324 78 0 chr17 28089785 28089927 -67182724 + L1_Mur3 LINE L1 4627 4779 -1364 2 799 578 219 8 31 chr17 28090015 28090142 -67182509 - RSINE1 SINE B4 -38 127 4 2 799 289 116 285 18 chr17 28090348 28090480 -67182171 + B2_Mm2 SINE B2 24 194 -1 2 799 918 163 14 0 chr17 28090543 28090690 -67181961 - B1_Mur4 SINE Alu -1 149 1 2 799 971 259 125 85 chr17 28090703 28091078 -67181573 - RCHARR1 DNA MER1_type -575 399 10 2 799 370 107 0 9 chr17 28091128 28091188 -67181463 + B1_Mur1 SINE Alu 72 148 -1 2 799 186 43 0 0 chr17 28091265 28091288 -67181363 + (CGTG)n Simple_repeat Simple_repeat 4 26 0 2 799 216 232 18 18 chr17 28091309 28091366 -67181285 - B1F SINE Alu -2 147 91 2 799 816 148 51 19 chr17 28092603 28092769 -67179882 + B3 SINE B2 1 171 -22 2 799 632 248 47 60 chr17 28092897 28093112 -67179539 - B3 SINE B2 -4 212 1 2 799 695 230 0 21 chr17 28093143 28093285 -67179366 + B1_Mm SINE Alu 1 139 -8 2 799 24 53 0 0 chr17 28093338 28093376 -67179275 + AT_rich Low_complexity Low_complexity 1 38 0 2 799 413 262 52 19 chr17 28093438 28093555 -67179096 - PB1D7 SINE Alu 0 120 2 2 799 1281 91 47 31 chr17 28093694 28093886 -67178765 + B2_Mm2 SINE B2 1 195 0 2 799 554 237 40 121 chr17 28094125 28094298 -67178353 + RMER30 DNA MER1_type 5 163 -39 2 799 471 279 36 0 chr17 28094293 28094404 -67178247 + B4A SINE B4 122 236 -56 2 799 457 244 76 8 chr17 28094424 28094556 -67178095 - B1F2 SINE Alu -8 141 1 2 799 413 233 75 8 chr17 28094896 28095030 -67177621 - L1MD LINE L1 -2140 4006 3864 2 799 489 294 40 0 chr17 28095059 28095185 -67177466 - RSINE1 SINE B4 -32 133 3 2 799 333 222 157 0 chr17 28095223 28095331 -67177320 - L1MC LINE L1 -2338 3808 3684 2 799 4063 98 41 2 chr17 28095359 28095921 -67176730 + MT2B2 LTR ERVL 1 584 0 2 799 419 232 45 51 chr17 28095934 28096055 -67176596 - PB1D10 SINE Alu 0 117 1 2 799 550 306 95 52 chr17 28096055 28096520 -67176131 - L1MC LINE L1 -2450 3696 3212 2 799 360 0 0 0 chr17 28097828 28097868 -67174783 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 799 494 122 23 47 chr17 28098095 28098181 -67174470 - URR1B DNA MER1_type 0 225 142 2 799 1239 48 0 0 chr17 28098264 28098411 -67174240 + B1_Mus2 SINE Alu 1 147 0 2 799 438 143 0 105 chr17 28098434 28098520 -67174131 - URR1B DNA MER1_type -127 98 22 2 799 255 271 57 0 chr17 28098578 28098648 -67174003 + MIRc SINE MIR 15 88 -180 2 799 963 128 134 0 chr17 28099171 28099350 -67173301 + ORR1B2 LTR MaLR 1 203 -164 2 799 3600 165 49 9 chr17 28099349 28100021 -67172630 + ORR1B2-int LTR MaLR 811 1509 0 2 799 1833 121 79 84 chr17 28100021 28100046 -67172605 + ORR1B2 LTR MaLR 1 25 -342 2 799 1157 54 20 0 chr17 28100046 28100193 -67172458 + B1_Mur4 SINE Alu 1 150 0 2 799 1833 121 79 84 chr17 28100193 28100536 -67172115 + ORR1B2 LTR MaLR 26 367 0 2 799 303 93 0 0 chr17 28101590 28101633 -67171018 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 2 799 188 247 3 80 chr17 28101694 28101764 -67170887 + MIR SINE MIR 44 106 -156 2 799 279 0 0 0 chr17 28101764 28101795 -67170856 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 799 186 270 61 153 chr17 28101795 28101855 -67170796 + MIR3 SINE MIR 106 162 -46 2 799 523 235 0 0 chr17 28102003 28102101 -67170550 + ID_B1 SINE B4 120 217 -7 2 799 386 206 104 174 chr17 28102569 28102828 -67169823 - B4A SINE B4 -3 289 49 2 799 1171 82 0 0 chr17 28102887 28103034 -67169617 + B1_Mus1 SINE Alu 2 148 0 2 799 228 170 0 0 chr17 28103037 28103090 -67169561 + A-rich Low_complexity Low_complexity 1 53 0 2 799 1274 172 5 9 chr17 28103092 28103303 -67169348 - B3 SINE B2 -2 214 5 2 799 202 306 99 30 chr17 28103344 28103445 -67169206 - L2c LINE L2 -26 3361 3254 2 799 469 190 200 21 chr17 28104617 28104757 -67167894 - B4A SINE B4 -76 216 52 2 799 310 222 105 57 chr17 28105058 28105182 -67167469 - HAL1 LINE L1 -740 1767 1638 2 799 670 259 170 4 chr17 28105556 28105785 -67166866 + B4A SINE B4 5 271 -21 2 799 379 288 64 14 chr17 28107442 28107583 -67165068 - L1MB1 LINE L1 -249 5940 5793 2 799 423 314 83 5 chr17 28107727 28107932 -67164719 - L1M2 LINE L1 -708 5583 5363 2 799 412 287 39 20 chr17 28108624 28108770 -67163881 - L1M5 LINE L1 -436 5688 5538 2 799 2540 80 3 3 chr17 28108770 28109097 -67163554 - ORR1A2 LTR MaLR 0 327 1 2 799 750 221 40 11 chr17 28109240 28109414 -67163237 + B4 SINE B4 1 179 -113 2 799 288 296 111 10 chr17 28109458 28109557 -67163094 + PB1D7 SINE Alu 1 109 -11 2 799 669 265 81 0 chr17 28110151 28110336 -67162315 + B3 SINE B2 10 209 -7 2 799 253 217 217 0 chr17 28110684 28110744 -67161907 + ID4 SINE ID 9 81 -2 2 799 583 203 13 119 chr17 28111092 28111243 -67161408 - B1_Mur3 SINE Alu -13 136 2 2 799 274 331 123 0 chr17 28111245 28111375 -67161276 - MER2 DNA MER2_type -180 165 20 2 799 478 321 15 0 chr17 28112744 28112878 -67159773 + RSINE1 SINE B4 1 136 -29 2 799 1017 110 14 7 chr17 28113802 28113948 -67158703 - B1_Mus1 SINE Alu 0 148 2 2 799 243 0 0 0 chr17 28116251 28116278 -67156373 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 2 799 293 93 19 0 chr17 28116295 28116349 -67156302 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 799 819 263 98 4 chr17 28116354 28116598 -67156053 - B4A SINE B4 -21 271 5 2 799 268 314 32 6 chr17 28116771 28116879 -67155772 + MIRb SINE MIR 79 186 -82 2 799 387 279 61 15 chr17 28117878 28118009 -67154642 + B1F1 SINE Alu 5 141 -8 2 799 1378 96 16 0 chr17 28118135 28118322 -67154329 - B2_Mm2 SINE B2 -4 191 2 2 799 221 318 15 0 chr17 28118327 28118393 -67154258 + C-rich Low_complexity Low_complexity 3 69 0 2 799 239 269 0 0 chr17 28118437 28118489 -67154162 - L1MC4 LINE L1 -543 7499 7448 2 799 479 222 0 112 chr17 28118590 28118734 -67153917 - PB1D7 SINE Alu -24 126 7 2 799 237 341 83 45 chr17 28118618 28118750 -67153901 - B4A SINE B4 -75 217 81 2 799 1268 47 0 0 chr17 28119005 28119153 -67153498 - B1_Mus1 SINE Alu 0 148 1 2 799 180 0 0 0 chr17 28119459 28119479 -67153172 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2 799 323 276 12 26 chr17 28120108 28120135 -67152516 - ID4_ SINE ID -51 101 7 2 799 328 257 14 0 chr17 28120135 28120205 -67152446 - tRNA-Ala-GCY_ tRNA tRNA -4 71 1 3 799 1232 48 0 0 chr17 28122891 28123038 -67149613 + B1_Mm SINE Alu 1 147 0 3 799 564 136 87 0 chr17 28124017 28124120 -67148531 + B1_Mur1 SINE Alu 25 136 -13 3 799 534 277 87 41 chr17 28124119 28124315 -67148336 - B3 SINE B2 -11 205 1 3 799 1389 74 40 0 chr17 28124922 28125097 -67147554 + B2_Mm2 SINE B2 2 183 -12 3 799 327 329 25 89 chr17 28125139 28125296 -67147355 + B4A SINE B4 78 224 -68 3 799 808 147 0 56 chr17 28125156 28125300 -67147351 + B1_Mur2 SINE Alu 13 148 -1 3 799 767 167 27 27 chr17 28128038 28128186 -67144465 + B1_Mur2 SINE Alu 2 149 0 3 799 417 216 168 49 chr17 28128440 28128628 -67144023 - B3 SINE B2 -3 192 2 3 799 770 300 31 48 chr17 28128748 28129042 -67143609 - B4A SINE B4 -1 291 3 3 799 29 0 0 0 chr17 28129530 28129559 -67143092 + AT_rich Low_complexity Low_complexity 1 29 0 3 799 429 249 17 90 chr17 28129882 28130063 -67142588 - B3 SINE B2 -44 172 2 3 799 465 34 0 0 chr17 28130293 28130352 -67142299 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 799 1524 73 16 0 chr17 28130365 28130557 -67142094 - B2_Mm2 SINE B2 0 195 1 3 799 267 294 23 53 chr17 28132443 28132576 -67140075 - MLT1A LTR MaLR 0 374 246 3 799 213 121 0 0 chr17 28133702 28133735 -67138916 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 799 325 302 100 58 chr17 28133781 28133849 -67138802 - B4A SINE B4 -6 286 119 3 799 420 168 45 98 chr17 28133849 28133961 -67138690 - B1_Mur3 SINE Alu -1 119 14 3 799 271 198 26 137 chr17 28133870 28133987 -67138664 - MT2B LTR ERVL -343 258 155 3 799 211 290 65 0 chr17 28134483 28134494 -67138157 + B4 SINE B4 71 85 -207 3 799 296 279 0 196 chr17 28134494 28134632 -67138019 + PB1D7 SINE Alu 1 111 -9 3 799 255 31 0 0 chr17 28135301 28135333 -67137318 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3 799 472 243 46 26 chr17 28135727 28135879 -67136772 + B3A SINE B2 2 156 -42 3 799 1133 41 13 27 chr17 28135911 28136060 -67136591 - B1_Mm SINE Alu 0 147 1 3 799 277 280 140 0 chr17 28136075 28136168 -67136483 + B4A SINE B4 111 216 -76 3 799 777 54 250 0 chr17 28136247 28136359 -67136292 + B1_Mus1 SINE Alu 2 141 -7 3 799 402 21 0 0 chr17 28136359 28136406 -67136245 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 799 260 312 0 25 chr17 28136567 28136646 -67136005 + PB1 SINE Alu 11 87 -40 3 799 26 0 0 0 chr17 28139212 28139238 -67133413 + GC_rich Low_complexity Low_complexity 1 26 0 3 799 215 273 36 0 chr17 28141502 28141557 -67131094 + ID_B1 SINE B4 85 141 -83 3 799 284 261 76 0 chr17 28141665 28141757 -67130894 - PB1D10 SINE Alu -5 112 14 3 799 714 262 24 0 chr17 28141758 28141953 -67130698 + ORR1D1 LTR MaLR 1 200 -178 3 799 227 250 0 18 chr17 28142016 28142073 -67130578 + ORR1D1 LTR MaLR 316 371 -3 3 799 430 263 144 0 chr17 28142138 28142256 -67130395 + B1F1 SINE Alu 4 138 -11 3 799 198 103 0 0 chr17 28144136 28144165 -67128486 + (A)n Simple_repeat Simple_repeat 1 29 0 3 799 249 33 0 0 chr17 28144355 28144385 -67128266 + (CGGG)n Simple_repeat Simple_repeat 2 31 0 3 799 209 250 39 0 chr17 28147069 28147121 -67125530 + (CATG)n Simple_repeat Simple_repeat 3 56 0 3 799 281 321 28 28 chr17 28147125 28147234 -67125417 - PB1D7 SINE Alu -5 115 7 3 799 513 0 0 0 chr17 28147302 28147359 -67125292 + (GTTTG)n Simple_repeat Simple_repeat 1 57 0 3 799 271 236 0 0 chr17 28149045 28149100 -67123551 - B1F SINE Alu -52 97 43 3 799 633 120 37 0 chr17 28149717 28149825 -67122826 - B1_Mus2 SINE Alu -6 141 30 3 799 241 236 124 41 chr17 28149756 28149853 -67122798 - MT2B LTR ERVL -344 257 153 3 799 335 121 0 17 chr17 28151013 28151072 -67121579 + (GGGA)n Simple_repeat Simple_repeat 3 60 0 3 799 486 214 71 0 chr17 28151115 28151227 -67121424 - B1_Mur2 SINE Alu -22 127 8 3 799 838 216 35 92 chr17 28151233 28151462 -67121189 - B3 SINE B2 0 216 1 3 799 186 43 0 0 chr17 28151471 28151494 -67121157 + (A)n Simple_repeat Simple_repeat 1 23 0 3 799 313 363 51 28 chr17 28151846 28152022 -67120629 - L2a LINE L2 -3 3423 3244 3 799 292 185 141 71 chr17 28153881 28153980 -67118671 - PB1D10 SINE Alu -5 112 7 3 799 259 250 15 0 chr17 28154140 28154208 -67118443 - ID4 SINE ID 0 83 15 3 799 266 106 0 21 chr17 28154232 28154280 -67118371 + (TTTTC)n Simple_repeat Simple_repeat 2 48 0 3 799 668 130 187 0 chr17 28154321 28154444 -67118207 - B1_Mus1 SINE Alu -1 147 2 3 799 489 279 35 79 chr17 28154456 28154658 -67117993 - B3A SINE B2 -5 193 1 3 799 508 289 52 35 chr17 28156651 28156823 -67115828 - B4A SINE B4 -37 255 81 3 799 457 207 89 57 chr17 28156989 28157112 -67115539 + PB1 SINE Alu 1 127 0 3 799 493 128 38 9 chr17 28157594 28157712 -67114939 + B1_Mur4 SINE Alu 18 148 -2 3 799 511 192 0 0 chr17 28158081 28158180 -67114471 - PB1D7 SINE Alu -3 117 19 3 799 207 0 0 0 chr17 28158518 28158541 -67114110 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 799 856 190 42 0 chr17 28158570 28158712 -67113939 + B1_Mur2 SINE Alu 1 148 -1 3 799 339 25 0 0 chr17 28158753 28158793 -67113858 + (CAGA)n Simple_repeat Simple_repeat 3 42 0 3 799 241 256 22 55 chr17 28161893 28161984 -67110667 - L1MD3 LINE L1 -8 7987 7900 3 799 1490 68 16 0 chr17 28164726 28164916 -67107735 - B2_Mm2 SINE B2 -2 193 1 3 799 269 325 153 27 chr17 28165620 28165920 -67106731 - Tigger13a DNA MER2_type -188 583 246 3 799 235 233 13 64 chr17 28166017 28166095 -67106556 - PB1D10 SINE Alu 0 117 44 3 799 614 309 56 48 chr17 28168236 28168648 -67104003 - L1ME2z LINE L1 -144 6300 5886 3 799 870 249 128 18 chr17 28169373 28169647 -67103004 - MTEb LTR MaLR -75 304 1 3 799 805 101 18 0 chr17 28170562 28170671 -67101980 + PB1D9 SINE Alu 1 111 -9 3 799 737 117 9 2 chr17 28171773 28171902 -67100749 - B1_Mur4 SINE Alu -5 145 17 3 799 457 350 28 17 chr17 28172818 28172998 -67099653 - B4A SINE B4 -109 183 2 3 799 242 295 42 0 chr17 28173384 28173479 -67099172 + B4 SINE B4 70 168 -124 3 799 346 118 0 12 chr17 28173429 28173495 -67099156 + B1F2 SINE Alu 34 96 -21 3 799 847 243 15 19 chr17 28173525 28173731 -67098920 + B3 SINE B2 2 206 -10 3 799 1117 97 0 0 chr17 28175128 28175272 -67097379 + B1_Mus1 SINE Alu 4 147 -1 3 799 192 77 0 0 chr17 28175272 28175298 -67097353 + (GA)n Simple_repeat Simple_repeat 1 26 0 3 799 265 317 87 24 chr17 28175881 28176007 -67096644 + MIRb SINE MIR 2 135 -133 3 799 258 81 0 0 chr17 28178408 28178445 -67094206 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 99 198 309 133 10 chr17 28180407 28180505 -67092146 - MIR SINE MIR -96 166 57 3 800 465 267 24 24 chr17 28183746 28183778 -67088873 - ID_B1 SINE B4 -21 203 82 3 800 496 211 0 0 chr17 28183778 28183868 -67088783 - PB1D10 SINE Alu -27 90 1 3 800 368 198 208 0 chr17 28183868 28183961 -67088690 - PB1D7 SINE Alu -7 113 1 3 800 477 295 56 21 chr17 28184022 28184164 -67088487 - RSINE1 SINE B4 0 165 19 3 800 461 254 102 16 chr17 28184187 28184315 -67088336 + B1_Mur1 SINE Alu 9 147 -2 3 800 240 310 168 0 chr17 28186489 28186602 -67086049 + ID_B1 SINE B4 33 164 -60 3 800 500 93 13 0 chr17 28186598 28186673 -67085978 + B3A SINE B2 5 80 -118 3 800 555 133 59 50 chr17 28186750 28186869 -67085782 + PB1D9 SINE Alu 1 120 0 3 800 192 395 70 0 chr17 28186954 28187068 -67085583 + MIR SINE MIR 34 155 -107 3 800 1268 121 87 50 chr17 28187648 28187866 -67084785 + URR1A DNA MER1_type 1 226 0 3 800 707 247 70 12 chr17 28191319 28191491 -67081160 + B3 SINE B2 29 210 -6 3 800 231 114 0 0 chr17 28191933 28191977 -67080674 + (T)n Simple_repeat Simple_repeat 1 44 0 3 800 1146 82 0 14 chr17 28191980 28192128 -67080523 - B1_Mus2 SINE Alu 0 147 2 3 800 1764 316 146 100 chr17 28192129 28192296 -67080355 - MTE-int LTR MaLR -29 1551 1395 3 800 810 179 45 0 chr17 28192296 28192430 -67080221 - B1_Mus2 SINE Alu -7 140 1 3 800 1764 316 146 100 chr17 28192430 28192476 -67080175 - MTE-int LTR MaLR -186 1394 1358 3 800 688 209 190 11 chr17 28192476 28192650 -67080001 + B3 SINE B2 2 206 -10 3 800 1764 316 146 100 chr17 28192650 28193911 -67078740 - MTE-int LTR MaLR -223 1357 8 3 800 345 271 89 89 chr17 28200852 28200977 -67071674 + L1MDa LINE L1 1610 1733 -4900 3 800 1265 89 50 0 chr17 28200977 28201157 -67071494 - B2_Mm1a SINE B2 -3 190 2 3 800 345 271 89 89 chr17 28201157 28201266 -67071385 + L1MDa LINE L1 1734 1831 -4802 3 800 347 293 20 73 chr17 28201266 28201417 -67071234 + B1F SINE Alu 1 143 -6 3 800 345 271 89 89 chr17 28201417 28201485 -67071166 + L1MDa LINE L1 1832 1913 -4720 3 800 1517 77 0 5 chr17 28201521 28201716 -67070935 + B2_Mm2 SINE B2 2 195 0 3 800 1315 92 49 0 chr17 28201967 28202151 -67070500 + B2_Mm1a SINE B2 1 193 0 3 800 540 149 226 9 chr17 28202655 28202770 -67069881 + B2_Mm2 SINE B2 1 140 -55 3 800 294 118 3 38 chr17 28202835 28202899 -67069752 + B2_Mm2 SINE B2 47 109 -107 3 800 1199 81 0 0 chr17 28203057 28203205 -67069446 + B1_Mus1 SINE Alu 1 148 0 3 800 434 241 62 9 chr17 28204266 28204379 -67068272 + B1F SINE Alu 12 130 -19 3 800 219 36 0 0 chr17 28205643 28205671 -67066980 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 800 566 292 110 103 chr17 28205681 28205864 -67066787 - B4A SINE B4 0 292 86 4 800 468 241 71 0 chr17 28205864 28205976 -67066675 - PB1D9 SINE Alu 0 120 1 4 800 566 292 110 103 chr17 28205976 28206082 -67066569 - B4A SINE B4 -207 85 1 4 800 207 0 0 0 chr17 28206088 28206111 -67066540 + (A)n Simple_repeat Simple_repeat 1 23 0 4 800 219 109 21 21 chr17 28206794 28206841 -67065810 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 4 800 1325 100 50 0 chr17 28206880 28207060 -67065591 + B2_Mm2 SINE B2 2 190 -5 4 800 2753 77 0 0 chr17 28207971 28208361 -67064290 + L1_Mus4 LINE L1 6211 6600 -36 4 800 512 209 285 12 chr17 28208932 28209097 -67063554 + B3 SINE B2 2 211 -5 4 800 375 180 87 33 chr17 28209109 28209201 -67063450 - PB1D9 SINE Alu 0 120 24 4 800 543 224 7 59 chr17 28209224 28209245 -67063406 + ID_B1 SINE B4 77 219 -4 4 800 933 77 0 0 chr17 28209245 28209375 -67063276 + B1_Mus2 SINE Alu 13 142 -5 4 800 315 0 0 0 chr17 28209379 28209414 -67063237 + (TGGA)n Simple_repeat Simple_repeat 3 37 0 4 800 2634 117 69 211 chr17 28210045 28210373 -67062278 + RMER6A LTR ERVK 1 298 -458 4 800 1076 66 22 0 chr17 28210373 28210510 -67062141 - B1_Mus1 SINE Alu -8 140 1 4 800 2634 117 69 211 chr17 28210510 28210537 -67062114 + RMER6A LTR ERVK 299 316 -440 4 800 1190 83 71 0 chr17 28210537 28210705 -67061946 + B2_Mm1t SINE B2 1 180 -13 4 800 2634 117 69 211 chr17 28210705 28210821 -67061830 + RMER6A LTR ERVK 317 317 -439 4 800 558 0 0 0 chr17 28210821 28210883 -67061768 + (GGAA)n Simple_repeat Simple_repeat 4 65 0 4 800 2634 130 68 202 chr17 28210883 28211275 -67061376 + RMER6A LTR ERVK 317 722 -34 4 800 550 40 27 0 chr17 28211394 28211468 -67061183 + B1_Mus2 SINE Alu 63 138 -9 4 800 454 14 68 14 chr17 28211484 28211557 -67061094 - RMER6A LTR ERVK -447 309 233 4 800 484 160 10 10 chr17 28211954 28212055 -67060596 + CT-rich Low_complexity Low_complexity 2 102 0 4 800 387 125 0 0 chr17 28213344 28213416 -67059235 + (TTTC)n Simple_repeat Simple_repeat 3 74 0 4 800 499 165 76 1 chr17 28213481 28213616 -67059035 + B1F2 SINE Alu 1 149 -1 4 800 1140 69 75 0 chr17 28213789 28213963 -67058688 + B2_Mm2 SINE B2 9 195 0 4 800 828 176 0 20 chr17 28213969 28214120 -67058531 + B1_Mur3 SINE Alu 2 149 0 4 800 360 233 9 37 chr17 28214220 28214327 -67058324 + L1MC LINE L1 4861 4964 -1182 4 800 256 273 29 123 chr17 28214332 28214410 -67058241 - MMAR1 DNA Mariner -10 1276 1204 4 800 1241 48 0 0 chr17 28214410 28214556 -67058095 + B1_Mus2 SINE Alu 2 147 0 4 800 256 273 29 123 chr17 28214556 28214615 -67058036 - MMAR1 DNA Mariner -83 1203 1152 4 800 647 221 23 0 chr17 28214620 28214751 -67057900 - B1F2 SINE Alu -1 148 15 4 800 518 321 8 98 chr17 28214751 28214865 -67057786 - ID_B1 SINE B4 -1 223 1 4 800 1118 102 42 0 chr17 28215225 28215392 -67057259 + B2_Mm2 SINE B2 2 175 -20 4 800 275 0 29 0 chr17 28215549 28215584 -67057067 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 4 800 1170 51 0 0 chr17 28215584 28215721 -67056930 - B1_Mus1 SINE Alu -10 138 2 4 800 765 191 169 0 chr17 28215984 28216167 -67056484 + B3 SINE B2 3 216 0 4 800 207 105 0 26 chr17 28216635 28216674 -67055977 + (CACCC)n Simple_repeat Simple_repeat 2 39 0 4 800 215 249 6 36 chr17 28217340 28217508 -67055143 + C-rich Low_complexity Low_complexity 1 162 0 4 800 362 245 43 0 chr17 28217904 28217998 -67054653 - ID_B1 SINE B4 -67 157 60 4 800 806 185 156 6 chr17 28218052 28218231 -67054420 + B3 SINE B2 2 207 -9 4 800 467 161 61 58 chr17 28218264 28218401 -67054250 - B1_Mus2 SINE Alu 0 147 6 4 800 230 286 29 0 chr17 28218492 28218562 -67054089 - B3 SINE B2 -40 176 105 4 800 236 274 0 16 chr17 28218609 28218672 -67053979 + B4A SINE B4 83 144 -148 4 800 320 260 8 39 chr17 28218620 28218725 -67053926 + PB1D10 SINE Alu 9 119 -30 4 800 357 24 0 0 chr17 28219123 28219165 -67053486 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 800 951 132 0 7 chr17 28219199 28219344 -67053307 - B1_Mur4 SINE Alu -5 145 2 4 800 482 315 6 0 chr17 28219510 28219672 -67052979 + RSINE1 SINE B4 3 165 0 4 800 207 204 0 0 chr17 28219672 28219716 -67052935 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 800 410 244 44 37 chr17 28220369 28220505 -67052146 - B1F1 SINE Alu -4 145 9 4 800 699 219 23 16 chr17 28220670 28220828 -67051823 + ID_B1 SINE B4 84 246 -46 4 800 237 33 0 0 chr17 28221181 28221211 -67051440 + (CAAAC)n Simple_repeat Simple_repeat 2 31 0 4 800 30 0 0 0 chr17 28222313 28222343 -67050308 + AT_rich Low_complexity Low_complexity 1 30 0 4 800 419 291 35 57 chr17 28223264 28223483 -67049168 - L1MB4 LINE L1 -2 6181 5971 4 800 621 216 0 0 chr17 28223590 28223849 -67048802 + (CA)n Simple_repeat Simple_repeat 1 259 0 4 800 543 242 0 0 chr17 28223860 28224038 -67048613 + (CA)n Simple_repeat Simple_repeat 1 178 0 4 800 350 279 0 6 chr17 28224049 28224208 -67048443 + (CATA)n Simple_repeat Simple_repeat 1 158 0 4 800 380 132 12 0 chr17 28224286 28224369 -67048282 + (CA)n Simple_repeat Simple_repeat 2 85 0 4 800 327 309 0 30 chr17 28224781 28224881 -67047770 + B1F SINE Alu 43 139 -10 4 800 414 0 0 0 chr17 28224898 28224944 -67047707 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 800 1431 84 11 0 chr17 28225201 28225391 -67047260 - B2_Mm1t SINE B2 -1 192 1 4 800 709 225 131 0 chr17 28225751 28225911 -67046740 - B3A SINE B2 -17 181 1 4 800 597 120 0 0 chr17 28225926 28226018 -67046633 + (TCCC)n Simple_repeat Simple_repeat 4 95 0 4 800 1523 54 11 5 chr17 28226653 28226840 -67045811 - B2_Mm2 SINE B2 -6 189 2 4 800 315 270 114 18 chr17 28226844 28226970 -67045681 - PB1D7 SINE Alu -8 141 1 4 800 583 203 41 0 chr17 28227110 28227233 -67045418 - B1_Mur1 SINE Alu -21 128 1 4 800 296 331 72 28 chr17 28227260 28227294 -67045357 - ID_B1 SINE B4 -46 246 213 4 800 1207 49 14 0 chr17 28227294 28227438 -67045213 - B1_Mm SINE Alu 0 147 2 4 800 433 264 0 28 chr17 28227443 28227552 -67045099 - PB1D10 SINE Alu -2 115 10 4 800 296 304 80 22 chr17 28227552 28227564 -67045087 - ID_B1 SINE B4 -80 207 79 4 800 234 0 0 0 chr17 28227660 28227686 -67044965 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 800 629 147 46 0 chr17 28227714 28227823 -67044828 - B1_Mur2 SINE Alu -27 122 9 4 800 294 29 0 0 chr17 28227836 28227871 -67044780 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 800 867 162 15 0 chr17 28227871 28228007 -67044644 - B1_Mus2 SINE Alu -9 138 1 4 800 853 259 56 160 chr17 28228008 28228421 -67044230 + MTE2a LTR MaLR 10 379 0 4 800 949 287 85 34 chr17 28228476 28228949 -67043702 - L1MEc LINE L1 -3213 3106 2610 4 800 842 212 94 25 chr17 28228957 28229160 -67043491 + ID_B1 SINE B4 1 217 -7 4 800 400 281 0 0 chr17 28229222 28229311 -67043340 - B1_Mur3 SINE Alu -56 93 5 4 800 260 312 0 0 chr17 28229254 28229318 -67043333 - B4 SINE B4 -146 146 83 4 800 499 235 262 0 chr17 28229375 28229524 -67043127 - B3A SINE B2 -9 189 2 4 800 701 296 84 12 chr17 28229599 28229944 -67042707 - L1MEc LINE L1 -4345 2055 1686 4 800 243 114 0 0 chr17 28230007 28230051 -67042600 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 800 629 200 24 0 chr17 28230063 28230188 -67042463 - RSINE1 SINE B4 -35 130 3 4 800 943 162 0 20 chr17 28230462 28230613 -67042038 - B1_Mur3 SINE Alu -1 148 1 4 800 1411 51 84 0 chr17 28230674 28230693 -67041958 - B2_Mm1a SINE B2 0 193 175 4 800 306 0 0 0 chr17 28230693 28230727 -67041924 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 4 800 1411 51 84 0 chr17 28230727 28230885 -67041766 - B2_Mm1a SINE B2 -19 174 2 4 800 1041 190 29 14 chr17 28230897 28231105 -67041546 - B3 SINE B2 -1 215 5 4 800 243 0 0 0 chr17 28231217 28231244 -67041407 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 4 800 1655 37 5 0 chr17 28231294 28231484 -67041167 + B2_Mm1a SINE B2 2 192 -1 4 800 1246 48 0 0 chr17 28231648 28231795 -67040856 + B1_Mus2 SINE Alu 1 147 0 4 800 331 249 7 134 chr17 28231836 28231921 -67040730 + MT2B LTR ERVL 96 151 -433 4 800 656 156 8 23 chr17 28231921 28232052 -67040599 + B1_Mur4 SINE Alu 1 129 -21 4 800 379 276 265 25 chr17 28232196 28232400 -67040251 - MTD LTR MaLR -61 358 106 4 800 612 269 71 20 chr17 28232402 28232599 -67040052 + B3 SINE B2 1 207 -9 4 800 1642 27 21 0 chr17 28232619 28232807 -67039844 - B2_Mm1a SINE B2 0 193 2 4 800 1207 28 28 0 chr17 28232851 28232995 -67039656 + B1_Mus1 SINE Alu 1 148 0 4 800 674 140 0 32 chr17 28233005 28233094 -67039557 + polypurine Low_complexity Low_complexity 2 90 0 4 800 1523 68 5 0 chr17 28233094 28233284 -67039367 + B2_Mm1a SINE B2 1 191 -2 4 800 674 140 0 32 chr17 28233284 28233349 -67039302 + polypurine Low_complexity Low_complexity 91 151 0 4 800 250 294 14 14 chr17 28233369 28233438 -67039213 - MTD LTR MaLR -350 71 3 4 800 211 211 195 13 chr17 28234821 28234898 -67037753 + PB1D10 SINE Alu 10 100 -17 4 800 186 43 0 0 chr17 28235641 28235664 -67036987 + (T)n Simple_repeat Simple_repeat 1 23 0 4 800 334 281 121 15 chr17 28236086 28236246 -67036405 + MIRb SINE MIR 75 258 -10 4 800 447 137 0 0 chr17 28236366 28236439 -67036212 + (TCCC)n Simple_repeat Simple_repeat 4 76 0 4 800 403 189 93 9 chr17 28236671 28236778 -67035873 - ID_B1 SINE B4 -1 223 108 4 800 959 39 8 0 chr17 28237074 28237201 -67035450 - B1_Mus2 SINE Alu 0 147 20 4 800 358 165 9 133 chr17 28237109 28237214 -67035437 - MT2B LTR ERVL -337 264 173 4 800 792 181 184 43 chr17 28237237 28237422 -67035229 - B3 SINE B2 -5 211 1 4 800 569 208 72 129 chr17 28237499 28237560 -67035091 + B3A SINE B2 3 54 -144 4 800 1213 96 96 0 chr17 28237560 28237738 -67034913 + B2_Mm2 SINE B2 1 195 0 4 800 569 208 72 129 chr17 28237738 28237869 -67034782 + B3A SINE B2 55 184 -14 4 800 350 276 0 0 chr17 28237969 28238045 -67034606 + ID_B1 SINE B4 142 217 -7 5 800 393 248 92 42 chr17 28238097 28238125 -67034526 - ID_B1 SINE B4 -43 249 144 5 800 552 203 116 8 chr17 28238125 28238254 -67034397 - B1_Mur2 SINE Alu -1 148 6 5 800 393 248 92 42 chr17 28238254 28238271 -67034380 - ID_B1 SINE B4 -43 143 70 5 800 232 326 63 0 chr17 28238505 28238600 -67034051 + LTR48 LTR ERV1 271 371 -416 5 800 189 360 23 11 chr17 28238982 28239069 -67033582 + MIR SINE MIR 103 190 -72 5 800 570 258 4 0 chr17 28239470 28239704 -67032947 + (TG)n Simple_repeat Simple_repeat 1 235 0 5 800 699 108 205 8 chr17 28239761 28239883 -67032768 + B1_Mus2 SINE Alu 2 147 0 5 800 467 252 67 0 chr17 28239923 28240042 -67032609 - B3 SINE B2 -2 214 88 5 800 350 132 44 52 chr17 28240043 28240179 -67032472 + (TCTCTG)n Simple_repeat Simple_repeat 3 137 0 5 800 273 286 0 0 chr17 28240193 28240263 -67032388 - B3 SINE B2 -131 85 16 5 800 516 309 96 20 chr17 28240267 28240465 -67032186 - B4A SINE B4 -58 234 22 5 800 498 236 78 8 chr17 28241034 28241162 -67031489 + ID_B1 SINE B4 82 218 -6 5 800 198 0 0 0 chr17 28241179 28241201 -67031450 + (TGG)n Simple_repeat Simple_repeat 2 23 0 5 800 1572 67 0 5 chr17 28241206 28241400 -67031251 + B2_Mm2 SINE B2 2 194 -1 5 800 618 214 184 0 chr17 28242110 28242311 -67030340 + B4A SINE B4 2 239 -53 5 800 320 213 0 57 chr17 28242914 28243011 -67029640 + PB1D10 SINE Alu 51 117 0 5 800 313 229 0 0 chr17 28243201 28243262 -67029389 + B3 SINE B2 70 130 -86 5 800 381 225 22 0 chr17 28243283 28243372 -67029279 - RSINE1 SINE B4 -70 95 5 5 800 284 225 16 112 chr17 28243408 28243533 -67029118 - B2_Mm2 SINE B2 0 195 83 5 800 354 214 17 20 chr17 28243639 28243749 -67028902 - PB1D10 SINE Alu -5 112 4 5 800 333 370 0 36 chr17 28243775 28243915 -67028736 + MIRc SINE MIR 19 153 -115 5 800 231 36 0 0 chr17 28244140 28244168 -67028483 + (TC)n Simple_repeat Simple_repeat 1 28 0 5 800 252 289 40 94 chr17 28244663 28244813 -67027838 - MIR3 SINE MIR -99 169 29 5 800 308 279 12 21 chr17 28244794 28244905 -67027746 + MIRc SINE MIR 64 177 -99 5 800 388 234 16 0 chr17 28244963 28245276 -67027375 + (TG)n Simple_repeat Simple_repeat 1 318 0 5 800 253 245 14 0 chr17 28245319 28245458 -67027193 + (TG)n Simple_repeat Simple_repeat 2 142 0 5 800 318 326 37 22 chr17 28245852 28245987 -67026664 - MLT1J LTR MaLR -280 232 96 5 800 458 240 29 20 chr17 28246112 28246214 -67026437 + RSINE1 SINE B4 25 127 -38 5 800 1473 51 17 0 chr17 28246227 28246404 -67026247 + B2_Mm2 SINE B2 2 181 -14 5 800 541 252 74 13 chr17 28246419 28246568 -67026083 - B3 SINE B2 -9 207 50 5 800 656 279 189 21 chr17 28246682 28246920 -67025731 + B4 SINE B4 5 282 -10 5 800 596 238 8 8 chr17 28247706 28247829 -67024822 + ID_B1 SINE B4 2 124 -100 5 800 225 0 0 0 chr17 28247829 28247854 -67024797 + (TGGGGG)n Simple_repeat Simple_repeat 5 29 0 5 800 227 378 0 11 chr17 28247865 28247956 -67024695 - MIR SINE MIR -153 109 20 5 800 180 0 0 0 chr17 28248721 28248741 -67023910 + (CACCC)n Simple_repeat Simple_repeat 3 22 0 5 800 359 215 65 0 chr17 28248946 28249039 -67023612 + L1MB7 LINE L1 5795 5893 -291 5 800 491 223 41 0 chr17 28249042 28249163 -67023488 - B1F1 SINE Alu -15 134 9 5 800 4433 116 75 17 chr17 28249168 28249861 -67022790 - RMER19A LTR ERVK 0 737 5 5 800 226 258 154 22 chr17 28249887 28249978 -67022673 - B1F2 SINE Alu 0 149 47 5 800 926 143 13 13 chr17 28250407 28250556 -67022095 + B1_Mur3 SINE Alu 1 149 0 5 800 360 0 0 0 chr17 28250741 28250781 -67021870 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 800 226 200 46 0 chr17 28252027 28252092 -67020559 + (TG)n Simple_repeat Simple_repeat 1 68 0 5 800 747 257 217 13 chr17 28252128 28252471 -67020180 - MTD LTR MaLR -21 398 1 5 800 1236 48 7 0 chr17 28252687 28252833 -67019818 + B1_Mus2 SINE Alu 1 147 0 5 800 400 48 32 16 chr17 28253009 28253072 -67019579 + (GGGA)n Simple_repeat Simple_repeat 4 67 0 5 800 277 277 0 15 chr17 28253268 28253334 -67019317 - B4A SINE B4 -220 72 8 5 800 30 0 0 0 chr17 28253711 28253741 -67018910 + AT_rich Low_complexity Low_complexity 1 30 0 5 800 660 219 72 7 chr17 28253741 28253879 -67018772 + B1_Mur2 SINE Alu 2 148 -1 5 800 297 0 0 0 chr17 28253912 28253945 -67018706 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 800 441 230 20 0 chr17 28253970 28254070 -67018581 - B3A SINE B2 -85 113 12 5 800 247 308 43 11 chr17 28254077 28254169 -67018482 - ID_B1 SINE B4 0 224 130 5 800 266 269 117 42 chr17 28254205 28254325 -67018326 + RSINE1 SINE B4 12 140 -25 5 800 183 80 0 0 chr17 28254362 28254387 -67018264 + (A)n Simple_repeat Simple_repeat 1 25 0 5 800 569 252 6 75 chr17 28254400 28254559 -67018092 + ID_B1 SINE B4 77 224 0 5 800 447 179 235 90 chr17 28255447 28255487 -67017164 + B2_Mm2 SINE B2 1 45 -150 5 800 1233 77 65 0 chr17 28255487 28255657 -67016994 + B2_Mm2 SINE B2 1 181 -14 5 800 447 179 235 90 chr17 28255657 28255750 -67016901 + B2_Mm2 SINE B2 46 159 -36 5 800 330 45 0 0 chr17 28255750 28255794 -67016857 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 5 800 447 179 235 90 chr17 28255794 28255825 -67016826 + B2_Mm2 SINE B2 160 190 -5 5 800 267 266 152 0 chr17 28256506 28256585 -67016066 + PB1D10 SINE Alu 6 96 -21 5 800 239 239 34 0 chr17 28256603 28256691 -67015960 + RMER17C LTR ERVK 167 257 -153 5 800 538 227 33 16 chr17 28256793 28256914 -67015737 + B3A SINE B2 49 171 -27 5 800 423 0 0 0 chr17 28256919 28256966 -67015685 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 800 201 250 0 0 chr17 28256968 28257028 -67015623 + (TAGG)n Simple_repeat Simple_repeat 1 60 0 5 800 858 212 133 6 chr17 28257030 28257183 -67015468 + B3 SINE B2 2 177 -39 5 800 300 70 0 0 chr17 28257183 28257226 -67015425 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 800 858 212 133 6 chr17 28257226 28257252 -67015399 + B3 SINE B2 178 204 -12 5 800 711 208 249 0 chr17 28257931 28258104 -67014547 + B3 SINE B2 1 216 0 5 800 493 232 0 0 chr17 28258129 28258224 -67014427 + PB1D10 SINE Alu 1 95 -22 5 800 721 236 135 22 chr17 28258385 28258563 -67014088 - B3A SINE B2 0 198 1 5 800 234 0 0 0 chr17 28258571 28258597 -67014054 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 5 800 1123 68 61 0 chr17 28258598 28258761 -67013890 - B2_Mm2 SINE B2 -22 173 1 5 800 654 268 9 32 chr17 28258868 28259076 -67013575 + B3A SINE B2 1 209 -7 5 800 2960 70 26 0 chr17 28259147 28259535 -67013116 + L1_Mus4 LINE L1 6238 6635 -1 5 800 287 280 0 13 chr17 28259589 28259665 -67012986 + ID_B1 SINE B4 144 218 -6 5 800 367 262 9 36 chr17 28259699 28259810 -67012841 + ID_B1 SINE B4 114 221 -3 5 800 243 159 0 0 chr17 28261065 28261109 -67011542 + MIR SINE MIR 99 142 -66 5 800 359 216 33 43 chr17 28261115 28261207 -67011444 + PB1D9 SINE Alu 14 104 -16 5 800 568 225 201 6 chr17 28261272 28261451 -67011200 - ID_B1 SINE B4 -7 217 4 5 800 257 100 78 20 chr17 28261601 28261652 -67010999 + B3 SINE B2 1 54 -162 5 800 687 212 14 35 chr17 28261997 28262139 -67010512 + B1_Mur1 SINE Alu 4 142 -7 5 800 561 30 0 0 chr17 28262143 28262210 -67010441 + (CAAAC)n Simple_repeat Simple_repeat 1 67 0 5 800 360 0 0 0 chr17 28262662 28262702 -67009949 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 800 450 0 0 0 chr17 28262702 28262751 -67009900 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 800 246 157 0 56 chr17 28262764 28262818 -67009833 - RSINE1 SINE B4 -36 129 79 5 800 807 161 36 0 chr17 28262965 28263102 -67009549 - B1_Mus2 SINE Alu -1 146 5 5 800 35 0 0 0 chr17 28263194 28263229 -67009422 + AT_rich Low_complexity Low_complexity 1 35 0 5 800 753 245 90 33 chr17 28263383 28263445 -67009206 - ID_B1 SINE B4 0 224 169 5 800 2252 136 20 3 chr17 28263445 28263798 -67008853 - RLTR15 LTR ERVK 0 359 1 5 800 753 245 90 33 chr17 28263798 28263946 -67008705 - ID_B1 SINE B4 -56 168 2 5 800 366 230 11 0 chr17 28263961 28264048 -67008603 - PB1D10 SINE Alu -1 116 29 5 800 1137 66 0 0 chr17 28264194 28264330 -67008321 + B1_Mus1 SINE Alu 3 138 -10 5 800 186 43 0 0 chr17 28264330 28264353 -67008298 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 800 1049 108 25 0 chr17 28264368 28264526 -67008125 + B2_Mm1t SINE B2 1 162 -31 5 800 651 120 0 61 chr17 28264543 28264658 -67007993 + URR1B DNA MER1_type 109 216 -9 5 800 798 0 29 0 chr17 28265021 28265123 -67007528 + (TTTC)n Simple_repeat Simple_repeat 1 105 0 5 800 255 206 30 45 chr17 28265132 28265198 -67007453 - ORR1D2 LTR MaLR -304 66 2 5 800 332 318 52 13 chr17 28265299 28265452 -67007199 - ID_B1 SINE B4 -59 165 7 5 800 423 0 0 0 chr17 28265647 28265694 -67006957 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 800 232 250 107 0 chr17 28265892 28265976 -67006675 + PB1D7 SINE Alu 6 98 -22 5 800 472 260 0 24 chr17 28265901 28266027 -67006624 + ID_B1 SINE B4 102 224 0 5 800 23 0 0 0 chr17 28266211 28266234 -67006417 + AT_rich Low_complexity Low_complexity 1 23 0 5 800 183 272 143 19 chr17 28266362 28266467 -67006184 - MIRb SINE MIR -62 206 89 5 800 942 112 0 43 chr17 28266795 28266935 -67005716 - B1_Mur4 SINE Alu -16 134 1 5 800 203 250 0 0 chr17 28267018 28267058 -67005593 + polypyrimidine Low_complexity Low_complexity 5 44 0 5 800 240 232 174 25 chr17 28267058 28267161 -67005490 - PB1D10 SINE Alu -1 148 28 5 800 268 232 214 0 chr17 28267829 28267941 -67004710 + ID_B1 SINE B4 86 221 -3 6 800 752 204 0 33 chr17 28268005 28268157 -67004494 - B1_Mus2 SINE Alu 0 147 1 6 800 252 278 16 54 chr17 28268188 28268374 -67004277 + (CA)n Simple_repeat Simple_repeat 1 179 0 6 800 219 218 18 35 chr17 28269024 28269081 -67003570 + B4 SINE B4 16 71 -221 6 800 473 216 0 0 chr17 28269150 28269238 -67003413 - PB1D9 SINE Alu -4 116 29 6 800 943 176 122 0 chr17 28269375 28269563 -67003088 - ID_B1 SINE B4 -13 211 1 6 800 1216 35 0 7 chr17 28269618 28269761 -67002890 - B1_Mm SINE Alu -5 142 1 6 800 397 159 8 183 chr17 28270560 28270691 -67001960 + PB1D10 SINE Alu 5 112 -5 6 800 581 254 15 0 chr17 28271212 28271342 -67001309 + ID_B1 SINE B4 64 195 -29 6 800 395 243 0 112 chr17 28271234 28271359 -67001292 + PB1D10 SINE Alu 7 117 0 6 800 248 134 151 82 chr17 28271851 28271924 -67000727 - ID_B1 SINE B4 0 224 147 6 800 522 43 0 0 chr17 28272097 28272166 -67000485 + (TG)n Simple_repeat Simple_repeat 1 69 0 6 800 1230 73 17 11 chr17 28272173 28272352 -67000299 + B2_Mm2 SINE B2 16 195 0 6 800 906 244 29 24 chr17 28272586 28272796 -66999855 + ID_B1 SINE B4 5 215 -9 6 800 569 195 26 0 chr17 28272797 28272910 -66999741 + B1_Mur4 SINE Alu 35 150 0 6 800 291 20 0 73 chr17 28272912 28272967 -66999684 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 6 800 22 0 0 0 chr17 28272993 28273015 -66999636 + AT_rich Low_complexity Low_complexity 1 22 0 6 800 765 170 0 0 chr17 28274140 28274281 -66998370 + CT-rich Low_complexity Low_complexity 3 143 0 6 800 748 251 54 16 chr17 28274570 28274756 -66997895 - B3A SINE B2 -5 193 1 6 800 373 267 0 55 chr17 28274759 28274886 -66997765 - ID_B1 SINE B4 -89 135 16 6 800 232 260 48 68 chr17 28275048 28275151 -66997500 + MIRb SINE MIR 20 120 -148 6 800 260 293 16 65 chr17 28275264 28275388 -66997263 + MT2B2 LTR ERVL 151 268 -316 6 800 406 226 68 10 chr17 28275282 28275385 -66997266 + B1F SINE Alu 3 111 -38 6 800 386 262 91 45 chr17 28275385 28275414 -66997237 + ID_B1 SINE B4 84 221 -3 6 800 428 184 81 0 chr17 28276143 28276230 -66996421 + B1_Mm SINE Alu 42 135 -12 6 800 1282 27 0 7 chr17 28276634 28276782 -66995869 + B1_Mm SINE Alu 1 147 0 6 800 229 301 113 57 chr17 28277781 28277922 -66994729 - MIR3 SINE MIR -37 171 23 6 800 25 51 0 0 chr17 28278916 28278955 -66993696 + GC_rich Low_complexity Low_complexity 1 39 0 6 800 456 207 0 0 chr17 28279000 28279116 -66993535 + GA-rich Low_complexity Low_complexity 3 118 0 6 800 28 48 0 0 chr17 28279297 28279339 -66993312 + GC_rich Low_complexity Low_complexity 1 42 0 6 800 22 0 0 0 chr17 28279437 28279459 -66993192 + GC_rich Low_complexity Low_complexity 1 22 0 6 800 180 97 0 0 chr17 28280652 28280683 -66991968 + (G)n Simple_repeat Simple_repeat 1 31 0 6 800 23 0 0 0 chr17 28282201 28282224 -66990427 + AT_rich Low_complexity Low_complexity 1 23 0 6 800 405 148 0 0 chr17 28283150 28283231 -66989420 + (TG)n Simple_repeat Simple_repeat 1 81 0 6 800 198 0 0 0 chr17 28284464 28284486 -66988165 + (T)n Simple_repeat Simple_repeat 1 22 0 6 800 549 0 0 0 chr17 28284851 28284912 -66987739 + (TC)n Simple_repeat Simple_repeat 2 62 0 6 800 282 269 30 0 chr17 28285125 28285192 -66987459 - RSINE1 SINE B4 -2 163 95 6 800 293 335 64 32 chr17 28285189 28285346 -66987305 - B4A SINE B4 -126 166 5 6 800 226 276 171 11 chr17 28285881 28285969 -66986682 - MER5B DNA MER1_type -74 104 3 6 800 534 204 17 50 chr17 28287125 28287244 -66985407 + PB1D10 SINE Alu 1 115 -2 6 800 194 0 39 0 chr17 28287246 28287272 -66985379 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 800 185 338 14 29 chr17 28287607 28287677 -66984974 - MER5A DNA MER1_type -70 119 51 6 800 474 175 97 0 chr17 28288068 28288171 -66984480 - B1_Mus1 SINE Alu 0 148 36 6 800 549 314 0 0 chr17 28288852 28288989 -66983662 + ID_B1 SINE B4 82 218 -6 6 800 339 85 0 0 chr17 28290776 28290823 -66981828 + (CGTG)n Simple_repeat Simple_repeat 4 50 0 6 800 1715 26 0 0 chr17 28290879 28291072 -66981579 - B2_Mm1a SINE B2 0 193 1 6 800 194 143 0 28 chr17 28292255 28292291 -66980360 - L2a LINE L2 -328 3098 3064 6 800 528 223 115 0 chr17 28292413 28292552 -66980099 - B3 SINE B2 -11 205 51 6 800 189 0 0 0 chr17 28292724 28292745 -66979906 + (TG)n Simple_repeat Simple_repeat 1 21 0 6 800 246 388 53 15 chr17 28293242 28293373 -66979278 + L2b LINE L2 3227 3362 -13 6 800 500 171 36 54 chr17 28293378 28293489 -66979162 + PB1D9 SINE Alu 1 109 -11 6 800 22 35 0 0 chr17 28297047 28297076 -66975575 + GC_rich Low_complexity Low_complexity 1 29 0 6 800 213 387 13 0 chr17 28299464 28299539 -66973112 - MER91A DNA Tip100 -40 156 81 6 800 333 204 20 129 chr17 28299590 28299691 -66972960 + MT2B LTR ERVL 151 240 -361 6 800 743 136 88 0 chr17 28299619 28299744 -66972907 + B1_Mus1 SINE Alu 11 146 -2 6 800 223 193 256 22 chr17 28300220 28300247 -66972404 - B1F SINE Alu -17 132 102 6 800 414 0 0 0 chr17 28300247 28300293 -66972358 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 800 224 195 250 22 chr17 28300293 28300357 -66972294 - PB1D7 SINE Alu -48 101 20 6 800 231 191 72 14 chr17 28300561 28300630 -66972021 - L1MB1 LINE L1 -14 6175 6103 6 800 372 250 42 42 chr17 28305696 28305792 -66966859 - PB1D10 SINE Alu -1 116 21 6 800 663 195 23 8 chr17 28305841 28305970 -66966681 + B1_Mur2 SINE Alu 2 132 -17 6 800 771 250 30 25 chr17 28305985 28306182 -66966469 - B3A SINE B2 0 198 1 6 800 358 303 45 9 chr17 28306206 28306316 -66966335 + PB1 SINE Alu 1 114 -13 6 800 443 193 167 50 chr17 28306380 28306500 -66966151 + B1_Mur1 SINE Alu 11 144 -5 6 800 350 269 13 0 chr17 28306646 28306724 -66965927 - RSINE1 SINE B4 -85 80 2 6 800 253 344 0 6 chr17 28307081 28307168 -66965483 + AluF_3 SINE Alu 139 204 -107 6 800 203 333 0 0 chr17 28307215 28307278 -66965373 - L2 LINE L2 -621 2798 2736 6 800 464 308 28 7 chr17 28307279 28307423 -66965228 + B1F SINE Alu 3 149 0 6 800 1048 210 39 14 chr17 28307515 28307723 -66964928 + B3 SINE B2 1 213 -3 6 800 444 317 168 14 chr17 28307799 28308084 -66964567 - L2 LINE L2 -690 2729 2401 6 800 190 292 27 14 chr17 28309366 28309439 -66963212 - L2 LINE L2 -1997 1422 1349 6 801 239 319 14 14 chr17 28312010 28312083 -66960568 + B1_Mus2 SINE Alu 2 74 -73 6 801 261 304 0 14 chr17 28312163 28312233 -66960418 + ID4 SINE ID 13 81 -2 6 801 628 184 16 23 chr17 28312303 28312431 -66960220 + B1_Mur1 SINE Alu 2 128 -21 6 801 341 240 7 134 chr17 28312431 28312446 -66960205 + MT2B LTR ERVL 189 288 -313 6 801 572 283 29 0 chr17 28312670 28312808 -66959843 - RSINE1 SINE B4 0 165 24 6 801 329 271 41 10 chr17 28312788 28312885 -66959766 - ID_B1 SINE B4 -67 157 58 6 801 256 211 55 27 chr17 28313168 28313241 -66959410 + PB1D10 SINE Alu 43 117 0 6 801 23 33 0 0 chr17 28314225 28314255 -66958396 + GC_rich Low_complexity Low_complexity 1 30 0 6 801 191 384 27 20 chr17 28315145 28315294 -66957357 + MIR3 SINE MIR 52 201 -7 6 801 360 327 62 12 chr17 28316229 28316390 -66956261 - MER34 LTR ERV1 -65 477 309 6 801 195 333 63 56 chr17 28317113 28317256 -66955395 + L2 LINE L2 1567 1710 -1709 6 801 520 223 131 41 chr17 28318059 28318204 -66954447 + RSINE1 SINE B4 8 165 0 6 801 251 272 11 32 chr17 28318852 28318864 -66953787 - L2a LINE L2 -1 3425 3414 6 801 216 0 0 0 chr17 28318864 28318888 -66953763 + (TCCA)n Simple_repeat Simple_repeat 1 24 0 6 801 251 272 11 32 chr17 28318888 28318970 -66953681 - L2a LINE L2 -13 3413 3333 6 801 327 347 91 33 chr17 28318984 28319258 -66953393 - L2a LINE L2 -196 3230 2941 6 801 359 310 26 0 chr17 28319287 28319400 -66953251 - L2a LINE L2 -562 2857 2742 6 801 238 311 107 13 chr17 28319466 28319616 -66953035 - L2a LINE L2 -677 2742 2579 6 801 521 250 24 0 chr17 28319716 28319840 -66952811 - ID_B1 SINE B4 -12 212 86 6 801 253 89 0 83 chr17 28319925 28320004 -66952647 - B1_Mur4 SINE Alu 0 147 82 6 801 453 304 98 18 chr17 28320474 28320638 -66952013 + B4A SINE B4 116 292 0 6 801 254 282 0 0 chr17 28320638 28320709 -66951942 + (CA)n Simple_repeat Simple_repeat 1 71 0 6 801 360 299 207 14 chr17 28320725 28321000 -66951651 - L1MC LINE L1 -543 5801 5474 6 801 264 245 168 9 chr17 28321088 28321195 -66951456 - B1F2 SINE Alu -2 147 24 6 801 579 122 0 0 chr17 28321504 28321594 -66951057 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 6 801 440 274 24 8 chr17 28321610 28321735 -66950916 - B1_Mur1 SINE Alu 0 149 23 6 801 320 264 77 0 chr17 28322989 28323080 -66949571 + PB1D10 SINE Alu 15 112 -5 6 801 416 130 26 0 chr17 28323302 28323379 -66949272 + GA-rich Low_complexity Low_complexity 1 79 0 6 801 223 225 114 0 chr17 28323579 28323652 -66948999 + MIRc SINE MIR 78 152 -56 6 801 279 338 78 14 chr17 28323856 28323997 -66948654 - MIRb SINE MIR -6 262 113 6 801 1363 104 5 0 chr17 28324438 28324630 -66948021 + B2_Mm2 SINE B2 1 193 -2 6 801 246 32 0 0 chr17 28324756 28324787 -66947864 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 801 1100 60 30 0 chr17 28324787 28324921 -66947730 - B1_Mus2 SINE Alu -8 139 2 6 801 298 297 102 0 chr17 28324924 28325042 -66947609 + MIR SINE MIR 22 151 -111 6 801 561 303 0 0 chr17 28325042 28325174 -66947477 + RSINE1 SINE B4 3 134 -31 6 801 362 300 60 0 chr17 28325700 28325800 -66946851 + RSINE1 SINE B4 10 115 -50 6 801 198 0 0 0 chr17 28326515 28326537 -66946114 + (TG)n Simple_repeat Simple_repeat 1 22 0 7 801 351 0 0 0 chr17 28326537 28326575 -66946076 + (GA)n Simple_repeat Simple_repeat 1 39 0 7 801 216 0 0 0 chr17 28326691 28326715 -66945936 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 801 243 343 39 48 chr17 28327246 28327350 -66945301 + MER53 DNA hAT 19 121 -72 7 801 442 226 162 37 chr17 28327397 28327564 -66945087 + B3A SINE B2 24 216 0 7 801 900 76 8 0 chr17 28328075 28328206 -66944445 - B1_Mus2 SINE Alu -3 144 13 7 801 383 211 60 60 chr17 28328107 28328223 -66944428 - MT2B LTR ERVL -337 264 149 7 801 438 225 0 0 chr17 28328686 28328797 -66943854 + (TA)n Simple_repeat Simple_repeat 2 112 0 7 801 982 143 17 40 chr17 28328802 28328977 -66943674 - B2_Mm2 SINE B2 -23 172 2 7 801 1148 263 72 64 chr17 28328989 28329460 -66943191 - MTEb-int LTR MaLR -1102 478 4 7 801 322 312 54 86 chr17 28329451 28329812 -66942839 - MTEb LTR MaLR -1 378 25 7 801 420 292 98 35 chr17 28330055 28330229 -66942422 + ID_B1 SINE B4 40 224 0 7 801 375 269 26 44 chr17 28330237 28330350 -66942301 + PB1D10 SINE Alu 5 115 -2 7 801 249 306 23 12 chr17 28330350 28330436 -66942215 + BC1_Mm scRNA scRNA 2 88 -64 7 801 496 296 14 7 chr17 28330436 28330579 -66942072 + B1F2 SINE Alu 1 144 -5 7 801 915 234 101 22 chr17 28330695 28330962 -66941689 + B4 SINE B4 5 292 0 7 801 282 277 24 0 chr17 28330966 28331049 -66941602 + (CA)n Simple_repeat Simple_repeat 1 85 0 7 801 571 272 23 19 chr17 28331090 28331260 -66941391 - ID_B1 SINE B4 0 224 63 7 801 874 118 27 40 chr17 28332442 28332592 -66940059 + B1_Mur3 SINE Alu 2 149 0 7 801 194 62 31 0 chr17 28332607 28332639 -66940012 + (CAAA)n Simple_repeat Simple_repeat 3 35 0 7 801 375 23 0 0 chr17 28332653 28332697 -66939954 + (GGGA)n Simple_repeat Simple_repeat 1 44 0 7 801 566 275 173 83 chr17 28332865 28332996 -66939655 - RCHARR1 DNA MER1_type -3 971 827 7 801 770 254 22 11 chr17 28332996 28333175 -66939476 + B3A SINE B2 2 182 -16 7 801 515 275 173 83 chr17 28333175 28333487 -66939164 - RCHARR1 DNA MER1_type -148 826 489 7 801 1516 68 0 10 chr17 28333489 28333682 -66938969 - B2_Mm2 SINE B2 -4 191 1 7 801 1093 43 0 0 chr17 28333710 28333850 -66938801 - B1_Mm SINE Alu 0 147 8 7 801 1184 289 108 11 chr17 28333855 28334299 -66938352 - RCHARR1 DNA MER1_type -479 495 9 7 801 309 267 126 19 chr17 28334981 28335084 -66937567 + PB1D10 SINE Alu 2 115 -2 7 801 1657 31 0 25 chr17 28335776 28335973 -66936678 - B2_Mm1t SINE B2 -1 192 1 7 801 207 167 0 0 chr17 28336427 28336469 -66936182 + (TATG)n Simple_repeat Simple_repeat 2 43 0 7 801 469 261 99 33 chr17 28336588 28336770 -66935881 + ORR1D2 LTR MaLR 40 233 -137 7 801 1262 41 0 0 chr17 28336886 28337032 -66935619 - B1_Mus2 SINE Alu 0 147 2 7 801 279 316 52 17 chr17 28340278 28340394 -66932257 + MT2B2 LTR ERVL 131 250 -334 7 801 273 277 15 15 chr17 28340399 28340465 -66932186 + ID4_ SINE ID 8 73 -10 7 801 195 42 0 0 chr17 28340479 28340503 -66932148 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 7 801 1018 67 74 0 chr17 28340503 28340652 -66931999 - B2_Mm1a SINE B2 -33 160 1 7 801 697 182 71 21 chr17 28340685 28340825 -66931826 + B1_Mur2 SINE Alu 2 148 -1 7 801 1464 74 21 0 chr17 28340841 28341031 -66931620 + B2_Mm2 SINE B2 2 195 0 7 801 203 397 0 25 chr17 28341664 28341744 -66930907 + MIR3 SINE MIR 120 197 -11 7 801 798 69 35 0 chr17 28341848 28341964 -66930687 + B1_Mus1 SINE Alu 22 141 -7 7 801 718 164 24 6 chr17 28343578 28343744 -66928907 + CT-rich Low_complexity Low_complexity 1 169 0 7 801 297 0 0 0 chr17 28345433 28345466 -66927185 + (CA)n Simple_repeat Simple_repeat 1 33 0 7 801 232 180 80 0 chr17 28346964 28347014 -66925637 + PB1D7 SINE Alu 3 56 -64 7 801 750 149 7 13 chr17 28347033 28347183 -66925468 + GA-rich Low_complexity Low_complexity 2 150 0 7 801 225 0 0 0 chr17 28347254 28347279 -66925372 + (T)n Simple_repeat Simple_repeat 1 25 0 7 801 1242 48 0 0 chr17 28347279 28347426 -66925225 - B1_Mus2 SINE Alu 0 147 1 7 801 189 0 0 0 chr17 28347519 28347540 -66925111 + (TTG)n Simple_repeat Simple_repeat 2 22 0 7 801 867 85 0 0 chr17 28347540 28347658 -66924993 - B1_Mur4 SINE Alu -11 139 22 7 801 1068 132 5 3 chr17 28347692 28348084 -66924567 + (TG)n Simple_repeat Simple_repeat 1 392 0 7 801 643 243 27 7 chr17 28348106 28348255 -66924396 - RSINE1 SINE B4 -1 164 13 7 801 370 206 168 0 chr17 28348369 28348476 -66924175 - B1F1 SINE Alu -24 125 1 7 801 233 348 88 7 chr17 28348476 28348516 -66924135 - MT2B LTR ERVL -433 168 118 7 801 476 194 0 149 chr17 28348514 28348635 -66924016 + PB1D7 SINE Alu 17 119 -1 7 801 276 225 31 73 chr17 28349051 28349147 -66923504 + MIRb SINE MIR 94 185 -83 7 801 466 261 115 67 chr17 28349420 28349629 -66923022 + ID_B1 SINE B4 5 223 -1 7 801 222 62 0 0 chr17 28349636 28349668 -66922983 + B3A SINE B2 2 33 -165 7 801 332 222 123 0 chr17 28349741 28349822 -66922829 + PB1D7 SINE Alu 21 111 -9 7 801 366 271 14 89 chr17 28349866 28350012 -66922639 + RSINE1 SINE B4 4 138 -27 7 801 795 189 159 6 chr17 28350305 28350481 -66922170 + B3 SINE B2 9 211 -5 7 801 620 297 12 64 chr17 28350521 28350752 -66921899 + B3A SINE B2 9 212 -4 7 801 684 243 51 61 chr17 28350829 28350868 -66921783 - B3A SINE B2 -2 196 167 7 801 324 0 0 0 chr17 28350868 28350904 -66921747 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 801 684 243 51 61 chr17 28350904 28351061 -66921590 - B3A SINE B2 -32 166 2 7 801 396 248 38 0 chr17 28351125 28351230 -66921421 + ID_B1 SINE B4 91 199 -25 7 801 244 258 16 0 chr17 28351438 28351500 -66921151 - MIRc SINE MIR -120 148 86 7 801 1722 16 0 20 chr17 28351614 28351811 -66920840 - B2_Mm1a SINE B2 0 193 1 7 801 1424 65 38 11 chr17 28351814 28352000 -66920651 - B2_Mm2 SINE B2 -4 191 1 7 801 869 67 51 29 chr17 28352054 28352192 -66920459 + B1_Mur4 SINE Alu 9 149 -1 7 801 289 254 60 0 chr17 28352410 28352477 -66920174 + ID4 SINE ID 2 72 -11 7 801 683 201 6 0 chr17 28352480 28352654 -66919997 + (CA)n Simple_repeat Simple_repeat 2 176 0 7 801 320 235 118 0 chr17 28352687 28352789 -66919862 - PB1D10 SINE Alu 0 117 4 7 801 317 286 250 0 chr17 28352832 28352944 -66919707 + RSINE1 SINE B4 3 142 -23 7 801 830 167 14 7 chr17 28353031 28353170 -66919481 - B1_Mur2 SINE Alu -5 144 5 7 801 246 232 33 86 chr17 28355577 28355714 -66916937 + MIR SINE MIR 35 157 -111 7 801 713 120 9 0 chr17 28355761 28355869 -66916782 - B1_Mur4 SINE Alu -23 127 19 7 801 318 50 0 0 chr17 28355871 28355911 -66916740 + (CCA)n Simple_repeat Simple_repeat 3 42 0 7 801 291 239 9 86 chr17 28356068 28356173 -66916478 + RLTR25B LTR ERVK 425 521 -507 7 801 728 150 0 0 chr17 28356082 28356195 -66916456 + B1_Mm SINE Alu 35 147 0 7 801 335 176 0 56 chr17 28356214 28356286 -66916365 - PB1D9 SINE Alu -51 69 2 7 801 1294 79 102 0 chr17 28356343 28356502 -66916149 + B2_Mm2 SINE B2 1 177 -18 7 801 360 0 0 0 chr17 28356502 28356542 -66916109 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 7 801 1294 79 102 0 chr17 28356542 28356559 -66916092 + B2_Mm2 SINE B2 178 194 -1 7 801 285 128 0 0 chr17 28357534 28357581 -66915070 + (T)n Simple_repeat Simple_repeat 1 47 0 7 801 249 304 0 128 chr17 28357582 28357601 -66915050 - PB1D10 SINE Alu 0 117 105 7 801 1232 48 0 0 chr17 28357601 28357746 -66914905 - B1_Mus1 SINE Alu -2 146 2 7 801 249 304 0 128 chr17 28357746 28357843 -66914808 - PB1D10 SINE Alu -13 104 16 7 801 856 287 20 51 chr17 28357988 28358282 -66914369 - B4 SINE B4 0 292 8 7 801 516 282 23 0 chr17 28358307 28358438 -66914213 - B4 SINE B4 -74 218 85 7 801 682 288 135 23 chr17 28358729 28359175 -66913476 - Lx7 LINE L1 -246 7227 6706 7 801 2331 171 21 15 chr17 28359176 28359645 -66913006 - RLTR16 LTR ERVK 0 505 34 7 801 1285 14 0 26 chr17 28359651 28359803 -66912848 + B1_Mus1 SINE Alu 1 148 0 7 801 342 262 0 35 chr17 28359825 28359912 -66912739 + PB1D10 SINE Alu 29 112 -5 7 801 781 121 96 8 chr17 28360068 28360193 -66912458 + B1_Mus1 SINE Alu 1 136 -12 7 801 387 0 0 0 chr17 28360193 28360236 -66912415 + (GA)n Simple_repeat Simple_repeat 2 44 0 7 801 211 321 0 21 chr17 28360892 28361035 -66911616 + (CAG)n Simple_repeat Simple_repeat 2 141 0 7 801 559 259 7 33 chr17 28361654 28361806 -66910845 + RSINE1 SINE B4 11 158 -7 7 801 320 179 49 49 chr17 28361918 28361941 -66910710 + B1F SINE Alu 67 148 -1 7 801 352 169 0 0 chr17 28361941 28362000 -66910651 + ID_B1 SINE B4 164 222 -2 7 801 703 258 96 15 chr17 28362003 28362200 -66910451 + B3 SINE B2 2 214 -2 7 801 531 139 20 10 chr17 28362213 28362327 -66910324 + B1_Mur4 SINE Alu 3 120 0 7 801 270 329 0 0 chr17 28362498 28362577 -66910074 - ID4 SINE ID -1 82 4 7 801 282 359 69 21 chr17 28363294 28363482 -66909169 + MIR SINE MIR 22 218 -44 7 801 630 250 52 35 chr17 28363659 28363833 -66908818 - B3 SINE B2 -13 203 27 7 801 270 91 0 0 chr17 28363833 28363841 -66908810 + (T)n Simple_repeat Simple_repeat 1 8 0 7 801 1136 29 73 0 chr17 28363841 28363978 -66908673 - B1_Mm SINE Alu 0 147 1 7 801 270 91 0 0 chr17 28363978 28364013 -66908638 + (T)n Simple_repeat Simple_repeat 1 35 0 7 801 1081 128 15 56 chr17 28364052 28364250 -66908401 - B2_Mm2 SINE B2 -5 190 1 8 801 264 167 56 0 chr17 28364301 28364355 -66908296 + B1_Mus2 SINE Alu 64 120 -27 8 801 26 0 0 0 chr17 28364362 28364388 -66908263 + AT_rich Low_complexity Low_complexity 1 26 0 8 801 504 214 0 59 chr17 28364390 28364509 -66908142 + B3A SINE B2 1 112 -86 8 801 459 237 75 82 chr17 28364483 28364630 -66908021 - ID_B1 SINE B4 -13 211 66 8 801 204 213 0 0 chr17 28365560 28365621 -66907030 + CT-rich Low_complexity Low_complexity 3 63 0 8 801 197 225 254 0 chr17 28365652 28365723 -66906928 + MIR SINE MIR 4 92 -170 8 801 180 256 0 0 chr17 28365909 28365948 -66906703 - MIR SINE MIR -137 125 87 8 801 426 292 59 12 chr17 28366207 28366377 -66906274 + MTEb LTR MaLR 202 379 0 8 801 330 295 62 9 chr17 28366603 28366716 -66905935 - PB1D7 SINE Alu -1 119 1 8 801 258 143 0 0 chr17 28366751 28366800 -66905851 + (TCTG)n Simple_repeat Simple_repeat 4 52 0 8 801 222 150 0 0 chr17 28366803 28366843 -66905808 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 801 542 210 129 0 chr17 28366844 28366968 -66905683 - RSINE1 SINE B4 -25 140 1 8 801 231 296 47 33 chr17 28367121 28367250 -66905401 + L2b LINE L2 3262 3372 -3 8 801 291 231 13 13 chr17 28367686 28367765 -66904886 + Lx8 LINE L1 7387 7465 -8 8 801 408 256 143 0 chr17 28367772 28367905 -66904746 + ID_B1 SINE B4 6 157 -67 8 801 238 298 69 35 chr17 28367856 28367943 -66904708 + PB1D10 SINE Alu 28 117 0 8 801 295 322 72 40 chr17 28368050 28368328 -66904323 + B4A SINE B4 1 287 -5 8 801 222 91 0 0 chr17 28368333 28368366 -66904285 + (CA)n Simple_repeat Simple_repeat 1 33 0 8 801 312 277 139 25 chr17 28368694 28368816 -66903835 - ID_B1 SINE B4 -2 222 87 8 801 293 268 14 0 chr17 28368902 28368973 -66903678 - RSINE1 SINE B4 -90 75 4 8 801 965 181 67 10 chr17 28368991 28369186 -66903465 + B3 SINE B2 1 206 -10 8 801 204 312 25 12 chr17 28369334 28369415 -66903236 + MIR3 SINE MIR 113 194 -14 8 801 180 0 0 0 chr17 28370362 28370382 -66902269 + (T)n Simple_repeat Simple_repeat 1 20 0 8 801 1651 16 21 5 chr17 28370788 28370977 -66901674 - B2_Mm1t SINE B2 0 193 2 8 801 441 278 8 60 chr17 28371080 28371214 -66901437 - RSINE1 SINE B4 -37 128 2 8 801 481 161 75 11 chr17 28372043 28372137 -66900514 - RSINE1 SINE B4 -58 107 8 8 801 393 242 58 8 chr17 28372145 28372266 -66900385 - B1F SINE Alu -20 129 3 8 801 256 248 85 100 chr17 28372154 28372284 -66900367 - ID_B1 SINE B4 -26 198 71 8 801 962 201 31 67 chr17 28372366 28372590 -66900061 - B3 SINE B2 0 216 1 8 801 186 43 0 0 chr17 28373817 28373840 -66898811 + (TG)n Simple_repeat Simple_repeat 1 23 0 8 801 294 262 71 0 chr17 28374385 28374469 -66898182 - PB1D9 SINE Alu -27 93 4 8 801 277 306 81 15 chr17 28375146 28375175 -66897476 - B4A SINE B4 -51 241 97 8 801 656 122 47 0 chr17 28375175 28375282 -66897369 - B1_Mus2 SINE Alu -24 123 12 8 801 409 194 10 88 chr17 28375192 28375294 -66897357 - MT2B LTR ERVL -344 257 164 8 801 243 103 0 0 chr17 28375320 28375359 -66897292 + (TCTG)n Simple_repeat Simple_repeat 4 42 0 8 801 289 333 55 31 chr17 28375391 28375518 -66897133 - MLT1G3 LTR MaLR -321 274 145 8 801 270 0 0 0 chr17 28376037 28376067 -66896584 + (T)n Simple_repeat Simple_repeat 1 30 0 8 801 717 189 0 0 chr17 28376102 28376224 -66896427 - B1_Mus2 SINE Alu -17 130 9 8 801 974 126 0 0 chr17 28376303 28376438 -66896213 + B1_Mur3 SINE Alu 1 135 -14 8 801 724 245 52 67 chr17 28376450 28376660 -66895991 + B3 SINE B2 10 216 0 8 801 22 35 0 0 chr17 28376666 28376695 -66895956 + AT_rich Low_complexity Low_complexity 1 29 0 8 801 1067 89 7 7 chr17 28376723 28376870 -66895781 + B1_Mus1 SINE Alu 2 148 0 8 801 363 250 172 0 chr17 28377352 28377468 -66895183 + ID_B1 SINE B4 87 222 -2 8 801 536 330 93 28 chr17 28379191 28379512 -66893139 + MLT1D LTR MaLR 86 427 -78 8 801 1243 41 0 0 chr17 28379983 28380130 -66892521 - B1_Mus1 SINE Alu 0 148 2 8 801 578 292 7 13 chr17 28380577 28380726 -66891925 - RSINE1 SINE B4 -15 150 3 8 801 1087 36 0 0 chr17 28381037 28381176 -66891475 + B1_Mus2 SINE Alu 8 146 -1 8 801 261 0 0 0 chr17 28381176 28381205 -66891446 + (CAA)n Simple_repeat Simple_repeat 2 30 0 8 801 292 239 7 7 chr17 28381572 28381715 -66890936 + (TG)n Simple_repeat Simple_repeat 1 143 0 8 801 491 217 67 37 chr17 28382409 28382543 -66890108 - RSINE1 SINE B4 -26 139 2 8 801 762 192 0 33 chr17 28383494 28383645 -66889006 + B1_Mus2 SINE Alu 1 146 -1 8 801 210 208 0 77 chr17 28383677 28383729 -66888922 + polypurine Low_complexity Low_complexity 4 51 0 8 801 365 58 19 0 chr17 28384323 28384375 -66888276 + (TCC)n Simple_repeat Simple_repeat 3 55 0 8 801 368 228 0 0 chr17 28385075 28385154 -66887497 - ID_B1 SINE B4 -8 216 138 8 801 246 298 58 0 chr17 28385154 28385179 -66887472 - B1_Mur1 SINE Alu -8 141 32 8 801 540 45 0 0 chr17 28385206 28385273 -66887378 + (TA)n Simple_repeat Simple_repeat 2 68 0 8 801 254 259 172 19 chr17 28385311 28385520 -66887131 - L1MB7 LINE L1 -64 6120 5880 8 801 247 377 63 49 chr17 28385562 28385785 -66886866 - B4 SINE B4 -23 269 44 8 801 869 242 56 9 chr17 28385883 28386096 -66886555 - ID_B1 SINE B4 0 224 2 8 801 731 218 182 0 chr17 28386116 28386336 -66886315 - RLTR20B3 LTR ERVK -7 570 311 8 801 299 280 128 28 chr17 28386515 28386695 -66885956 - L1MB3 LINE L1 -34 6149 5952 8 801 654 210 119 36 chr17 28386784 28386952 -66885699 - B3A SINE B2 -16 182 1 8 801 293 264 56 22 chr17 28386968 28387057 -66885594 - PB1D10 SINE Alu -6 111 20 8 801 288 250 12 50 chr17 28387077 28387157 -66885494 - L1MB3 LINE L1 -285 5898 5822 8 801 839 229 120 0 chr17 28387162 28387354 -66885297 - B3 SINE B2 0 216 2 8 801 583 191 30 22 chr17 28387382 28387516 -66885135 - B1_Mur1 SINE Alu -1 148 14 8 801 985 207 24 42 chr17 28387745 28387957 -66884694 - B3 SINE B2 -7 209 2 8 801 1211 35 14 0 chr17 28387980 28388124 -66884527 - B1_Mus2 SINE Alu 0 147 2 8 801 576 231 22 101 chr17 28388160 28388338 -66884313 - RSINE1 SINE B4 0 165 2 8 801 661 228 134 5 chr17 28388346 28388540 -66884111 - ID_B1 SINE B4 -3 221 3 8 801 263 305 0 0 chr17 28389166 28389225 -66883426 - MLT1H1 LTR MaLR -489 66 8 8 801 299 23 0 44 chr17 28389941 28389986 -66882665 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 8 801 803 47 0 0 chr17 28390062 28390169 -66882482 - B1_Mus1 SINE Alu -40 108 2 8 801 289 258 90 38 chr17 28390430 28390563 -66882088 - L1MB8 LINE L1 -172 6006 5867 8 801 234 0 0 0 chr17 28390574 28390600 -66882051 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 8 801 1420 62 0 27 chr17 28390601 28390785 -66881866 - B2_Mm2 SINE B2 -15 180 2 8 801 825 228 20 49 chr17 28390846 28391049 -66881602 - B3A SINE B2 0 198 2 8 801 413 242 50 10 chr17 28391107 28391207 -66881444 + PB1D10 SINE Alu 2 105 -12 8 801 209 186 0 0 chr17 28391209 28391252 -66881399 + CT-rich Low_complexity Low_complexity 2 44 0 8 801 207 0 0 0 chr17 28391252 28391275 -66881376 + (A)n Simple_repeat Simple_repeat 1 23 0 8 801 342 264 63 8 chr17 28391293 28391419 -66881232 - B3A SINE B2 -24 174 42 8 801 453 226 124 27 chr17 28391455 28391641 -66881010 - Lx6 LINE L1 -26 7434 7231 8 801 203 152 43 0 chr17 28392081 28392127 -66880524 + (CAGA)n Simple_repeat Simple_repeat 1 48 0 8 801 288 229 64 37 chr17 28392268 28392377 -66880274 - L1MA4 LINE L1 -395 5905 5794 8 801 304 299 97 0 chr17 28393062 28393196 -66879455 - B1F1 SINE Alu 0 149 3 8 801 266 125 21 0 chr17 28393214 28393262 -66879389 + (GGGAGA)n Simple_repeat Simple_repeat 1 49 0 8 801 895 181 0 13 chr17 28393310 28393461 -66879190 - B1_Mur1 SINE Alu 0 149 1 8 801 333 270 0 0 chr17 28393550 28393624 -66879027 - RSINE1 SINE B4 -89 76 3 8 801 252 154 0 0 chr17 28394528 28394580 -66878071 + CT-rich Low_complexity Low_complexity 4 55 0 8 801 676 103 85 31 chr17 28394584 28394714 -66877937 - B1_Mur4 SINE Alu -2 148 12 8 801 301 246 117 50 chr17 28394608 28394728 -66877923 - MT2B LTR ERVL -325 276 149 8 801 495 214 0 0 chr17 28395150 28395239 -66877412 - B1F2 SINE Alu -7 142 54 8 801 316 250 14 6 chr17 28395238 28395333 -66877318 - PB1D10 SINE Alu -24 125 28 8 801 263 330 31 0 chr17 28395331 28395428 -66877223 - MLT1A1 LTR MaLR -302 106 7 8 801 753 282 171 26 chr17 28396178 28396487 -66876164 - MTD LTR MaLR -48 371 18 8 801 376 222 71 71 chr17 28396534 28396660 -66875991 + ID_B1 SINE B4 97 222 -2 8 801 352 240 74 10 chr17 28397254 28397409 -66875242 + B3A SINE B2 17 186 -9 8 801 658 115 159 32 chr17 28397427 28397553 -66875098 - B1_Mm SINE Alu -1 146 5 8 801 210 37 0 0 chr17 28398151 28398178 -66874473 + (GA)n Simple_repeat Simple_repeat 1 27 0 8 801 333 0 0 0 chr17 28398812 28398849 -66873802 + (CA)n Simple_repeat Simple_repeat 1 37 0 8 801 246 62 0 0 chr17 28399036 28399068 -66873583 + (T)n Simple_repeat Simple_repeat 1 32 0 9 801 603 218 68 0 chr17 28399286 28399419 -66873232 - B1_Mur3 SINE Alu -7 142 1 9 801 1228 86 74 0 chr17 28399505 28399680 -66872971 + B2_Mm1a SINE B2 1 188 -5 9 801 432 0 0 0 chr17 28399765 28399813 -66872838 + (CA)n Simple_repeat Simple_repeat 2 49 0 9 801 3106 76 10 0 chr17 28399879 28400275 -66872376 + MTB LTR MaLR 1 400 0 9 801 428 236 371 0 chr17 28401128 28401268 -66871383 - ID_B1 SINE B4 -31 193 1 9 801 1040 134 209 0 chr17 28401497 28401669 -66870982 - B3 SINE B2 -8 208 1 9 801 200 197 32 16 chr17 28403324 28403351 -66869300 + A-rich Low_complexity Low_complexity 1 27 0 9 801 801 144 83 0 chr17 28403351 28403483 -66869168 + B1_Mur3 SINE Alu 1 143 -6 9 801 658 169 46 66 chr17 28403491 28403643 -66869008 + B1_Mur4 SINE Alu 1 149 -1 9 801 200 197 32 16 chr17 28403643 28403668 -66868983 + A-rich Low_complexity Low_complexity 36 62 0 9 801 1206 48 7 0 chr17 28404016 28404162 -66868489 - B1_Mus2 SINE Alu 0 147 1 9 801 225 65 0 0 chr17 28404164 28404195 -66868456 + (T)n Simple_repeat Simple_repeat 1 31 0 9 801 1154 68 7 7 chr17 28404195 28404342 -66868309 - B1_Mm SINE Alu 0 147 1 9 801 219 69 0 0 chr17 28404732 28404761 -66867890 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 801 247 186 0 0 chr17 28404812 28404855 -66867796 + B3 SINE B2 1 43 -173 9 801 248 210 123 0 chr17 28404867 28404948 -66867703 + B3 SINE B2 126 216 0 9 801 420 20 0 0 chr17 28404966 28405015 -66867636 + (CA)n Simple_repeat Simple_repeat 1 49 0 9 801 1251 41 0 7 chr17 28405763 28405911 -66866740 + B1_Mus1 SINE Alu 2 148 0 9 801 1054 215 18 32 chr17 28406070 28406291 -66866360 - B4 SINE B4 -72 220 3 9 801 186 404 25 19 chr17 28406737 28406896 -66865755 - L2b LINE L2 -212 3163 3004 9 801 536 253 191 12 chr17 28406981 28407149 -66865502 - B3 SINE B2 -7 209 12 9 801 558 296 80 0 chr17 28407805 28407967 -66864684 + B4 SINE B4 43 217 -75 9 801 1225 68 0 0 chr17 28408199 28408346 -66864305 + B1_Mus2 SINE Alu 1 147 0 9 801 210 71 0 0 chr17 28408346 28408374 -66864277 + (A)n Simple_repeat Simple_repeat 1 28 0 9 801 270 0 0 0 chr17 28410111 28410141 -66862510 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 9 801 462 228 97 117 chr17 28410149 28410303 -66862348 - RSINE1 SINE B4 -10 155 5 9 801 318 298 67 50 chr17 28410364 28410484 -66862167 + ID_B1 SINE B4 88 209 -15 9 801 201 121 0 0 chr17 28410497 28410530 -66862121 + (TCCC)n Simple_repeat Simple_repeat 1 33 0 9 801 850 203 0 0 chr17 28410530 28410673 -66861978 - B1F2 SINE Alu -5 144 2 9 801 703 274 0 10 chr17 28410708 28410893 -66861758 + B3A SINE B2 2 179 -37 9 801 245 336 91 33 chr17 28410923 28411092 -66861559 - MIR SINE MIR -91 185 3 9 801 1007 264 105 14 chr17 28411177 28411544 -66861107 - MTE2a LTR MaLR -14 405 10 9 801 219 23 22 65 chr17 28412368 28412414 -66860237 + (TTTTTG)n Simple_repeat Simple_repeat 5 48 0 9 801 1233 48 0 20 chr17 28412414 28412564 -66860087 - B1_Mus2 SINE Alu 0 147 1 9 801 1274 93 165 0 chr17 28412611 28412805 -66859846 + URR1A DNA MER1_type 1 226 0 9 801 276 259 86 0 chr17 28413053 28413134 -66859517 - B3 SINE B2 -4 212 125 9 801 457 177 0 0 chr17 28413130 28413209 -66859442 - B2_Mm2 SINE B2 -107 88 10 9 801 631 175 77 32 chr17 28415153 28415295 -66857356 + B1_Mur4 SINE Alu 1 150 0 9 801 459 35 0 0 chr17 28415343 28415400 -66857251 + (CA)n Simple_repeat Simple_repeat 1 57 0 9 801 271 315 68 45 chr17 28415469 28415615 -66857036 - B4 SINE B4 -149 143 5 9 801 527 313 26 7 chr17 28415620 28415771 -66856880 - RSINE1 SINE B4 0 165 12 9 801 504 176 71 36 chr17 28415789 28415901 -66856750 - B1F SINE Alu -33 116 1 9 801 343 248 40 71 chr17 28415901 28415915 -66856736 - ID_B1 SINE B4 -30 194 73 9 801 243 0 0 0 chr17 28415920 28415947 -66856704 + (T)n Simple_repeat Simple_repeat 1 27 0 9 801 247 316 40 0 chr17 28417690 28417766 -66854885 + MIRb SINE MIR 109 187 -81 9 801 462 18 0 0 chr17 28418278 28418333 -66854318 + (TG)n Simple_repeat Simple_repeat 1 55 0 9 801 304 300 0 0 chr17 28418883 28418963 -66853688 + (TG)n Simple_repeat Simple_repeat 1 80 0 9 801 525 265 26 39 chr17 28418963 28419116 -66853535 - RSINE1 SINE B4 0 165 15 9 801 221 0 0 33 chr17 28419293 28419323 -66853328 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 9 801 1068 36 0 21 chr17 28419323 28419465 -66853186 - B1_Mus1 SINE Alu 0 148 10 9 801 437 212 0 103 chr17 28419361 28419477 -66853174 - MT2B LTR ERVL -337 264 161 9 801 279 254 0 0 chr17 28420185 28420244 -66852407 - B1_Mur2 SINE Alu -18 131 73 9 801 339 286 49 93 chr17 28420479 28420641 -66852010 - ID_B1 SINE B4 -8 216 62 9 801 311 267 22 65 chr17 28420826 28420918 -66851733 - ID_B1 SINE B4 0 224 137 9 801 385 102 13 7 chr17 28420932 28421028 -66851623 - B2_Mm2 SINE B2 -14 181 47 9 801 604 218 70 43 chr17 28421027 28421056 -66851595 - ID_B1 SINE B4 -30 194 157 9 801 1376 79 11 0 chr17 28421056 28421233 -66851418 - B2_Mm1t SINE B2 -14 179 1 9 801 604 218 70 43 chr17 28421233 28421390 -66851261 - ID_B1 SINE B4 -68 156 3 9 801 293 266 161 46 chr17 28421832 28421962 -66850689 + ID_B1 SINE B4 78 222 -2 9 801 455 229 149 25 chr17 28421846 28421967 -66850684 + B1_Mur2 SINE Alu 14 149 0 9 801 315 127 0 0 chr17 28422024 28422087 -66850564 + (TCTG)n Simple_repeat Simple_repeat 2 64 0 9 801 1595 148 174 17 chr17 28422426 28422770 -66849881 - MTB_Mm LTR MaLR -8 399 2 9 801 397 293 90 5 chr17 28422970 28423117 -66849534 + ID_B1 SINE B4 90 249 -43 9 801 352 284 0 47 chr17 28424414 28424521 -66848130 + ID_B1 SINE B4 72 173 -51 9 801 482 217 0 10 chr17 28424432 28424546 -66848105 + B1_Mur1 SINE Alu 7 115 -34 9 801 198 185 15 44 chr17 28424547 28424615 -66848036 + G-rich Low_complexity Low_complexity 4 69 0 9 801 500 242 45 38 chr17 28425431 28425564 -66847087 + RSINE1 SINE B4 11 144 -21 9 801 635 158 60 119 chr17 28425662 28425813 -66846838 - B1_Mur1 SINE Alu 0 149 8 9 801 207 0 0 0 chr17 28425823 28425846 -66846805 + (TTG)n Simple_repeat Simple_repeat 2 24 0 9 801 3825 50 17 0 chr17 28425876 28426339 -66846312 + L1Md_F3 LINE L1 6114 6584 0 9 801 1350 61 33 0 chr17 28426353 28426533 -66846118 + B2_Mm1t SINE B2 1 186 -7 9 801 446 179 14 1 chr17 28426541 28426631 -66846020 + PB1D10 SINE Alu 1 91 -56 9 801 235 258 28 85 chr17 28426631 28426644 -66846007 + MT2B2 LTR ERVL 165 261 -323 9 801 325 309 65 32 chr17 28426808 28426831 -66845820 + B4 SINE B4 67 221 -67 9 801 493 217 31 55 chr17 28426831 28426958 -66845693 + PB1D9 SINE Alu 6 129 -20 9 801 770 101 150 30 chr17 28427511 28427644 -66845007 + B1_Mur3 SINE Alu 1 149 0 9 801 342 0 0 0 chr17 28428040 28428078 -66844573 + (TG)n Simple_repeat Simple_repeat 2 39 0 9 801 278 26 0 25 chr17 28428245 28428285 -66844366 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 9 801 738 143 17 0 chr17 28428285 28428404 -66844247 - B1_Mus1 SINE Alu -10 138 18 9 801 359 204 0 131 chr17 28428308 28428415 -66844236 - MT2B LTR ERVL -337 264 172 9 801 277 374 23 8 chr17 28428476 28428608 -66844043 + MIRb SINE MIR 111 244 -24 9 801 328 266 22 22 chr17 28428691 28428790 -66843861 + PB1D9 SINE Alu 34 132 -17 9 801 272 255 200 20 chr17 28429235 28429335 -66843316 + PB1D7 SINE Alu 3 120 0 9 801 246 292 15 0 chr17 28429446 28429511 -66843140 + B4A SINE B4 28 93 -199 9 801 662 262 60 0 chr17 28429513 28429662 -66842989 + RSINE1 SINE B4 3 160 -5 9 801 719 244 26 0 chr17 28429690 28429846 -66842805 + B3 SINE B2 1 160 -56 9 801 546 91 0 0 chr17 28429854 28429931 -66842720 + (GA)n Simple_repeat Simple_repeat 2 78 0 9 801 231 36 0 0 chr17 28429949 28429977 -66842674 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 9 801 491 238 31 8 chr17 28430013 28430140 -66842511 + B4A SINE B4 101 230 -62 9 801 870 151 7 27 chr17 28430140 28430290 -66842361 + B1_Mm SINE Alu 1 147 0 9 801 318 26 0 0 chr17 28430317 28430356 -66842295 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 801 350 269 0 0 chr17 28430365 28430443 -66842208 + ID_B1 SINE B4 147 224 0 9 801 651 209 94 28 chr17 28432805 28433006 -66839645 + B3A SINE B2 8 210 -6 9 801 420 279 47 0 chr17 28433032 28433161 -66839490 + ID_B1 SINE B4 21 155 -69 9 801 435 271 102 0 chr17 28433162 28433280 -66839371 + RSINE1 SINE B4 3 132 -33 9 801 216 0 0 0 chr17 28433299 28433323 -66839328 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 9 801 753 209 58 0 chr17 28433386 28433525 -66839126 - B1_Mur2 SINE Alu -1 148 2 9 801 1186 132 22 11 chr17 28433540 28433723 -66838928 + B2_Mm2 SINE B2 1 185 -10 9 801 535 208 0 9 chr17 28433775 28433882 -66838769 + B3 SINE B2 1 106 -110 9 801 1204 54 0 13 chr17 28434802 28434951 -66837700 + B1_Mus2 SINE Alu 1 147 0 9 801 346 264 0 0 chr17 28436090 28436162 -66836489 + ID4_ SINE ID 4 75 -8 9 801 182 200 0 0 chr17 28436302 28436337 -66836314 - MIRc SINE MIR -62 206 172 9 801 190 83 0 77 chr17 28436933 28436985 -66835666 + C-rich Low_complexity Low_complexity 3 50 0 1 801 478 214 20 10 chr17 28438700 28438799 -66833852 - RSINE1 SINE B4 -35 130 31 1 801 587 157 28 0 chr17 28438846 28438951 -66833700 - B2_Mm2 SINE B2 0 195 88 1 801 614 257 22 7 chr17 28438951 28439088 -66833563 + B1_Mur1 SINE Alu 1 139 -10 1 801 1156 48 13 27 chr17 28439101 28439114 -66833537 - B1_Mm SINE Alu 0 147 138 1 801 207 0 0 0 chr17 28439114 28439137 -66833514 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1 801 1156 48 13 27 chr17 28439137 28439272 -66833379 - B1_Mm SINE Alu -10 137 1 1 801 1441 54 0 41 chr17 28440905 28441099 -66831552 - B2_Mm2 SINE B2 -8 187 2 1 801 219 265 42 42 chr17 28441572 28441643 -66831008 + BC1_Mm scRNA scRNA 2 72 -80 1 801 1676 165 32 35 chr17 28441865 28441945 -66830706 - ORR1D1 LTR MaLR -29 345 272 1 801 1681 132 32 83 chr17 28441945 28442284 -66830367 - RLTRETN_Mm LTR ERVK 0 322 1 1 801 1676 165 32 35 chr17 28442284 28442377 -66830274 - ORR1D1 LTR MaLR -103 271 182 1 801 198 71 0 0 chr17 28442377 28442405 -66830246 + (CAGAGA)n Simple_repeat Simple_repeat 3 30 0 1 801 1676 165 32 35 chr17 28442405 28442575 -66830076 - ORR1D1 LTR MaLR -193 181 3 1 801 240 35 0 0 chr17 28442575 28442604 -66830047 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1 100 813 215 6 0 chr17 28442605 28442763 -66829888 - B3 SINE B2 -30 186 28 1 802 240 163 0 23 chr17 28442791 28442835 -66829816 - B1F1 SINE Alu -38 111 69 1 802 356 227 27 0 chr17 28442836 28442911 -66829740 - B3A SINE B2 -121 77 1 1 802 898 142 28 0 chr17 28442929 28443070 -66829581 - B1_Mus1 SINE Alu -1 147 3 1 802 1197 33 0 0 chr17 28443087 28443237 -66829414 - B2_Mm2 SINE B2 -45 150 1 1 802 1249 48 0 0 chr17 28443274 28443421 -66829230 + B1_Mus1 SINE Alu 2 148 0 1 802 214 65 0 0 chr17 28443434 28443465 -66829186 + B3 SINE B2 2 32 -184 1 802 328 83 358 9 chr17 28443557 28443666 -66828985 + B2_Mm2 SINE B2 47 193 -2 1 802 419 229 47 19 chr17 28443678 28443785 -66828866 + PB1D7 SINE Alu 1 110 -10 1 802 209 33 33 0 chr17 28444497 28444527 -66828124 + (TGGGGG)n Simple_repeat Simple_repeat 3 33 0 1 802 1089 74 0 45 chr17 28445045 28445201 -66827450 + B1_Mur4 SINE Alu 1 149 -1 1 802 478 152 0 0 chr17 28445213 28445292 -66827359 + ID_B1 SINE B4 145 223 -1 1 802 389 236 55 36 chr17 28445325 28445435 -66827216 + PB1D9 SINE Alu 9 120 0 1 802 200 323 32 0 chr17 28445936 28445998 -66826653 - MER91B DNA Tip100 -54 136 73 1 802 695 257 110 96 chr17 28446144 28446395 -66826256 + ORR1D2 LTR MaLR 85 339 -31 1 802 747 167 286 0 chr17 28446395 28446563 -66826088 - B3 SINE B2 0 216 1 1 802 695 245 117 106 chr17 28446563 28446599 -66826052 + ORR1D2 LTR MaLR 340 362 -8 1 802 1030 123 0 0 chr17 28446603 28446749 -66825902 + B1_Mus2 SINE Alu 1 146 -1 1 802 354 45 0 0 chr17 28446749 28446793 -66825858 + (GA)n Simple_repeat Simple_repeat 2 45 0 1 802 267 31 0 0 chr17 28446793 28446824 -66825827 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 1 802 659 274 111 0 chr17 28446848 28447038 -66825613 + ID_B1 SINE B4 1 211 -13 1 802 1220 61 0 0 chr17 28447075 28447222 -66825429 - B1_Mus1 SINE Alu -1 147 1 1 802 223 79 53 0 chr17 28447569 28447607 -66825044 + B2_Mm2 SINE B2 1 40 -155 1 802 1275 27 7 0 chr17 28447632 28447778 -66824873 + B1_Mus2 SINE Alu 1 147 0 1 802 1011 122 71 22 chr17 28447818 28448002 -66824649 + B2_Mm2 SINE B2 1 193 -2 1 802 837 76 112 46 chr17 28448002 28448154 -66824497 + B2_Mm2 SINE B2 31 192 -3 1 802 1287 67 79 0 chr17 28448154 28448332 -66824319 + B2_Mm1t SINE B2 1 192 -1 1 802 374 204 0 11 chr17 28448332 28448421 -66824230 + GA-rich Low_complexity Low_complexity 1 88 0 1 802 378 143 0 0 chr17 28448993 28449056 -66823595 + (TTTC)n Simple_repeat Simple_repeat 2 64 0 1 802 227 293 167 28 chr17 28449112 28449256 -66823395 + L2 LINE L2 2797 2960 -459 1 802 239 236 80 40 chr17 28449441 28449516 -66823135 + B3A SINE B2 3 80 -118 1 802 474 325 60 0 chr17 28449600 28449751 -66822900 + B3A SINE B2 1 160 -38 1 802 345 125 0 0 chr17 28449758 28449814 -66822837 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 802 899 178 153 16 chr17 28449834 28450017 -66822634 + B3 SINE B2 2 209 -7 1 802 1299 20 0 0 chr17 28450028 28450174 -66822477 - B1_Mus2 SINE Alu 0 147 2 1 802 250 271 122 20 chr17 28450869 28450967 -66821684 - PB1D10 SINE Alu -1 116 9 1 802 449 187 109 27 chr17 28451044 28451154 -66821497 + PB1D9 SINE Alu 2 120 0 1 802 419 222 64 9 chr17 28451155 28451264 -66821387 + PB1D10 SINE Alu 2 116 -1 1 802 758 112 26 0 chr17 28451326 28451442 -66821209 + PB1D9 SINE Alu 2 120 0 1 802 241 308 62 0 chr17 28451466 28451531 -66821120 + B1F SINE Alu 26 94 -55 1 802 248 198 45 80 chr17 28451532 28451620 -66821031 + MT2B LTR ERVL 194 278 -323 1 802 586 124 0 10 chr17 28451543 28451641 -66821010 + B1_Mur3 SINE Alu 47 143 -6 1 802 426 175 0 0 chr17 28451643 28451723 -66820928 + (TA)n Simple_repeat Simple_repeat 2 81 0 1 802 307 247 0 72 chr17 28451725 28451808 -66820843 - L1MC4a LINE L1 -1203 6679 6603 1 802 688 197 17 0 chr17 28452195 28452312 -66820339 - PB1D9 SINE Alu 0 120 2 1 802 386 264 23 0 chr17 28452406 28452493 -66820158 + PB1D10 SINE Alu 7 95 -22 1 802 330 328 117 0 chr17 28452493 28452529 -66820122 + ID_B1 SINE B4 87 224 0 1 802 540 188 48 55 chr17 28453560 28453706 -66818945 - B3 SINE B2 -5 211 67 1 802 609 62 0 0 chr17 28454704 28454785 -66817866 + B1_Mus2 SINE Alu 67 147 0 1 802 603 0 0 0 chr17 28455677 28455744 -66816907 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 1 802 1160 96 0 0 chr17 28455744 28455890 -66816761 - B1_Mus2 SINE Alu -1 146 1 1 802 505 219 70 9 chr17 28455893 28456008 -66816643 - ID_B1 SINE B4 0 224 103 1 802 464 197 109 47 chr17 28456008 28456020 -66816631 - B1F SINE Alu -1 147 13 1 802 494 280 60 8 chr17 28456257 28456390 -66816261 + ID_B1 SINE B4 84 223 -1 1 802 484 325 45 80 chr17 28456394 28456430 -66816221 + B3 SINE B2 1 36 -180 1 802 1347 95 16 0 chr17 28456430 28456620 -66816031 + B2_Mm1t SINE B2 1 193 0 1 802 662 252 47 30 chr17 28456620 28456807 -66815844 + B3A SINE B2 27 216 0 1 802 379 214 135 0 chr17 28456946 28457035 -66815616 + B1F SINE Alu 1 101 -48 1 802 685 161 54 1 chr17 28457036 28457165 -66815486 - B1_Mus2 SINE Alu 0 149 14 1 802 1092 133 0 6 chr17 28457225 28457399 -66815252 + B2_Mm2 SINE B2 5 177 -18 1 802 302 159 14 0 chr17 28457412 28457481 -66815170 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 802 402 259 102 0 chr17 28457980 28458088 -66814563 - ID_B1 SINE B4 -23 201 83 1 802 349 295 0 11 chr17 28458345 28458434 -66814217 - ID_B1 SINE B4 -116 108 21 1 802 189 0 0 0 chr17 28458436 28458457 -66814194 + (CCCCAG)n Simple_repeat Simple_repeat 5 25 0 1 802 354 262 154 8 chr17 28458541 28458664 -66813987 - ID_B1 SINE B4 -3 221 81 1 802 507 189 57 0 chr17 28458693 28458799 -66813852 - MTEb LTR MaLR -5 374 263 1 802 289 180 16 16 chr17 28458804 28458866 -66813785 - MTEb LTR MaLR -317 62 1 1 802 334 184 33 0 chr17 28459915 28459989 -66812662 + B1F SINE Alu 43 127 0 1 802 548 115 175 10 chr17 28460004 28460101 -66812550 + PB1D9 SINE Alu 1 113 -7 1 802 240 86 0 0 chr17 28460103 28460138 -66812513 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1 802 733 197 38 0 chr17 28460138 28460270 -66812381 + B1_Mur2 SINE Alu 2 138 -11 1 802 454 308 67 36 chr17 28460318 28460483 -66812168 + ID_B1 SINE B4 1 170 -54 1 802 216 310 115 0 chr17 28460408 28460495 -66812156 + PB1D9 SINE Alu 11 107 -13 1 802 1176 55 0 7 chr17 28460519 28460665 -66811986 + B1_Mm SINE Alu 1 145 -2 1 802 225 65 0 0 chr17 28460665 28460696 -66811955 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 802 21 0 0 0 chr17 28460696 28460717 -66811934 + AT_rich Low_complexity Low_complexity 1 21 0 1 802 225 237 0 106 chr17 28460728 28460794 -66811857 + ID_B1 SINE B4 166 224 0 1 802 362 269 39 0 chr17 28461103 28461207 -66811444 - B4A SINE B4 -78 214 107 1 802 1350 71 38 11 chr17 28461245 28461431 -66811220 - B2_Mm2 SINE B2 -1 194 4 1 802 944 238 19 19 chr17 28461438 28461466 -66811185 - B3 SINE B2 -10 206 180 1 802 306 0 0 0 chr17 28461466 28461500 -66811151 + (TC)n Simple_repeat Simple_repeat 1 34 0 1 802 944 238 19 19 chr17 28461500 28461677 -66810974 - B3 SINE B2 -37 179 1 1 802 561 256 153 0 chr17 28461705 28461842 -66810809 - RSINE1 SINE B4 -5 160 3 1 802 835 158 216 0 chr17 28461916 28462087 -66810564 + B3 SINE B2 3 210 -6 1 802 768 239 12 0 chr17 28462087 28462254 -66810397 - ID_B1 SINE B4 -16 208 40 1 802 518 217 37 2 chr17 28462253 28462395 -66810256 - B1_Mus2 SINE Alu -1 148 1 1 802 591 303 94 9 chr17 28462395 28462581 -66810070 - MTD LTR MaLR -210 209 6 1 802 641 191 30 30 chr17 28463514 28463649 -66809002 + ID_B1 SINE B4 84 218 -6 1 802 247 297 25 67 chr17 28463546 28463665 -66808986 + MLT1H-int LTR MaLR 570 683 -726 1 802 414 0 0 0 chr17 28463772 28463818 -66808833 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 802 503 253 0 108 chr17 28464161 28464246 -66808405 + MT2B LTR ERVL 91 155 -446 1 802 708 221 0 0 chr17 28464246 28464373 -66808278 + B1_Mus2 SINE Alu 1 127 -20 1 802 270 171 207 0 chr17 28466491 28466573 -66806078 - MTD LTR MaLR -224 195 97 1 802 898 116 213 0 chr17 28466988 28467143 -66805508 - B2_Mm2 SINE B2 -6 189 2 1 802 228 191 0 0 chr17 28467355 28467439 -66805212 + T-rich Low_complexity Low_complexity 1 84 0 1 802 21 57 0 0 chr17 28468759 28468794 -66803857 + AT_rich Low_complexity Low_complexity 1 35 0 1 802 22 0 0 0 chr17 28468986 28469008 -66803643 + GC_rich Low_complexity Low_complexity 1 22 0 1 802 196 128 115 0 chr17 28471732 28471810 -66800841 + (CCCCAG)n Simple_repeat Simple_repeat 1 87 0 1 802 258 105 0 0 chr17 28472958 28472996 -66799655 + (CTTG)n Simple_repeat Simple_repeat 2 39 0 1 802 425 146 122 20 chr17 28472996 28473088 -66799563 - PB1D9 SINE Alu -9 111 9 1 802 1523 42 0 35 chr17 28473938 28474135 -66798516 - B2_Mm1a SINE B2 -2 191 2 1 802 828 110 14 14 chr17 28474155 28474293 -66798358 - B1_Mur2 SINE Alu 0 149 12 1 802 278 256 67 113 chr17 28474162 28474312 -66798339 + YREP_Mm Unknown Unknown 182 324 -1488 1 802 432 326 171 0 chr17 28474746 28474927 -66797724 - MIR SINE MIR -48 214 3 1 802 329 242 108 108 chr17 28475052 28475154 -66797497 + B1_Mur2 SINE Alu 2 103 -46 1 802 337 235 22 40 chr17 28475490 28475610 -66797041 - B1F1 SINE Alu -26 123 7 1 802 779 189 120 0 chr17 28476200 28476375 -66796276 + MTD LTR MaLR 10 205 -214 1 802 1172 95 89 0 chr17 28476378 28476557 -66796094 + B2_Mm2 SINE B2 1 195 0 1 802 580 143 238 0 chr17 28476575 28476701 -66795950 + MTD LTR MaLR 255 410 -9 1 802 253 321 37 12 chr17 28478724 28478806 -66793845 + B3A SINE B2 46 129 -69 1 802 489 271 39 74 chr17 28478849 28479138 -66793513 + ID_B1 SINE B4 27 292 0 1 802 883 148 222 6 chr17 28479168 28479344 -66793307 + B3 SINE B2 3 216 0 1 802 281 238 108 54 chr17 28479453 28479564 -66793087 + PB1D10 SINE Alu 1 117 0 1 802 349 261 64 43 chr17 28479577 28479717 -66792934 + B1F1 SINE Alu 3 145 -4 1 802 638 179 8 8 chr17 28480301 28480419 -66792232 + B1_Mus2 SINE Alu 7 124 -23 1 802 275 238 162 0 chr17 28480412 28480492 -66792159 - PB1D10 SINE Alu -9 108 16 1 802 235 323 12 18 chr17 28480592 28480708 -66791943 - MIR SINE MIR -101 175 59 1 802 189 0 0 0 chr17 28483585 28483606 -66789045 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 802 711 245 38 13 chr17 28483650 28483807 -66788844 - RSINE1 SINE B4 -4 161 1 1 802 254 210 16 31 chr17 28483813 28483877 -66788774 - B1F SINE Alu -6 143 81 1 802 354 277 11 11 chr17 28483972 28484067 -66788584 - PB1D10 SINE Alu -8 109 15 1 802 712 115 143 32 chr17 28484171 28484297 -66788354 - B1_Mur3 SINE Alu -9 140 1 1 802 516 32 0 0 chr17 28484815 28484877 -66787774 + (TC)n Simple_repeat Simple_repeat 1 62 0 1 802 414 100 0 0 chr17 28484894 28484954 -66787697 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 802 198 0 0 0 chr17 28486064 28486086 -66786565 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 802 21 0 0 0 chr17 28486756 28486777 -66785874 + GC_rich Low_complexity Low_complexity 1 21 0 1 802 23 54 0 0 chr17 28487565 28487602 -66785049 + GC_rich Low_complexity Low_complexity 1 37 0 1 802 210 182 25 49 chr17 28487741 28487822 -66784829 + (CGGG)n Simple_repeat Simple_repeat 1 79 0 1 802 579 167 251 43 chr17 28489832 28489995 -66782656 + B3A SINE B2 1 197 -1 1 802 372 286 40 10 chr17 28490074 28490173 -66782478 + RSINE1 SINE B4 31 132 -33 1 802 672 165 71 0 chr17 28490246 28490373 -66782278 + B1_Mur2 SINE Alu 1 136 -13 1 802 419 298 47 113 chr17 28491064 28491123 -66781528 - B4A SINE B4 -85 207 159 1 802 1171 62 0 14 chr17 28491123 28491270 -66781381 - B1_Mus1 SINE Alu 0 148 4 1 802 419 298 47 113 chr17 28491270 28491422 -66781229 - B4A SINE B4 -134 158 10 1 802 438 20 0 0 chr17 28491434 28491485 -66781166 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 802 884 236 10 16 chr17 28491488 28491682 -66780969 - ID_B1 SINE B4 -16 208 16 1 802 1216 29 0 7 chr17 28492045 28492186 -66780465 - B1_Mm SINE Alu -7 140 1 1 802 556 229 0 9 chr17 28492617 28492727 -66779924 + PB1D9 SINE Alu 8 116 -4 1 802 231 133 229 3 chr17 28492739 28492794 -66779857 - B2_Mm2 SINE B2 -150 66 2 1 802 575 220 41 28 chr17 28492796 28492941 -66779710 - B1F1 SINE Alu -1 148 2 1 802 621 271 45 7 chr17 28493633 28493824 -66778827 + ID_B1 SINE B4 25 224 0 1 802 257 288 0 15 chr17 28493860 28493927 -66778724 + RSINE1 SINE B4 43 108 -57 1 802 468 0 0 0 chr17 28494084 28494136 -66778515 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 802 599 233 7 22 chr17 28494140 28494276 -66778375 - RSINE1 SINE B4 -29 136 3 1 802 391 243 6 186 chr17 28494528 28494580 -66778071 - B1_Mur2 SINE Alu 0 149 104 1 802 1185 68 0 26 chr17 28494580 28494731 -66777920 + B1_Mus1 SINE Alu 2 148 0 1 802 391 243 6 186 chr17 28494731 28494845 -66777806 - B1_Mur2 SINE Alu -46 103 13 1 802 538 226 56 35 chr17 28494838 28494980 -66777671 - ID_B1 SINE B4 -11 213 69 1 802 461 172 11 0 chr17 28494998 28495091 -66777560 + C-rich Low_complexity Low_complexity 6 99 0 1 802 543 274 8 0 chr17 28495094 28495218 -66777433 - ID_B1 SINE B4 -14 210 86 1 802 490 214 10 78 chr17 28495714 28495907 -66776744 + (CCCCAG)n Simple_repeat Simple_repeat 1 180 0 1 802 340 258 161 0 chr17 28496489 28496525 -66776126 - ID_B1 SINE B4 -17 207 171 1 802 1109 88 0 20 chr17 28496525 28496675 -66775976 - B1_Mus2 SINE Alu 0 147 1 1 802 340 258 161 0 chr17 28496675 28496762 -66775889 - ID_B1 SINE B4 -54 170 65 1 802 1254 190 5 0 chr17 28496783 28496994 -66775657 - B3 SINE B2 -4 212 1 1 802 366 218 200 8 chr17 28496996 28497121 -66775530 - B1F1 SINE Alu 0 149 1 1 802 272 421 51 32 chr17 28497179 28497395 -66775256 + MLT1F LTR MaLR 329 548 0 1 802 799 231 19 38 chr17 28498157 28498368 -66774283 - B3 SINE B2 -7 209 3 1 802 321 68 0 0 chr17 28498368 28498412 -66774239 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 802 538 214 94 0 chr17 28498439 28498556 -66774095 - B1_Mur4 SINE Alu -8 142 15 1 802 633 129 8 24 chr17 28498559 28498686 -66773965 + CT-rich Low_complexity Low_complexity 1 125 0 1 802 469 282 32 0 chr17 28498690 28498814 -66773837 - ID_B1 SINE B4 -2 222 95 1 802 288 272 37 0 chr17 28498955 28499036 -66773615 + PB1D10 SINE Alu 21 104 -13 1 802 252 77 0 0 chr17 28499056 28499095 -66773556 + (A)n Simple_repeat Simple_repeat 1 39 0 1 802 228 163 0 0 chr17 28499379 28499422 -66773229 + CT-rich Low_complexity Low_complexity 2 44 0 1 802 192 77 0 0 chr17 28500734 28500760 -66771891 + (CAT)n Simple_repeat Simple_repeat 3 28 0 1 802 319 237 203 0 chr17 28502395 28502513 -66770138 - B1F1 SINE Alu -6 143 2 2 802 506 94 0 23 chr17 28502681 28502768 -66769883 + (TTTC)n Simple_repeat Simple_repeat 2 86 0 3 802 1254 47 0 13 chr17 28502772 28502922 -66769729 - B1_Mus1 SINE Alu 0 148 1 4 802 614 214 14 51 chr17 28502924 28503062 -66769589 - B1_Mur1 SINE Alu 0 149 17 5 802 368 299 20 99 chr17 28502926 28503078 -66769573 - B4A SINE B4 -68 224 85 6 802 632 25 25 0 chr17 28503391 28503472 -66769179 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 7 802 1244 55 104 0 chr17 28503472 28503635 -66769016 - B2_Mm2 SINE B2 -15 180 1 8 802 1665 42 0 0 chr17 28503643 28503835 -66768816 - B2_Mm1a SINE B2 0 193 2 9 802 1360 57 0 111 chr17 28503863 28504079 -66768572 + B2_Mm2 SINE B2 2 193 -2 1 802 585 266 12 25 chr17 28504104 28504266 -66768385 + RSINE1 SINE B4 3 162 -3 1 802 303 336 45 38 chr17 28504606 28504739 -66767912 + MARNA DNA Mariner 226 359 -227 1 802 185 172 0 0 chr17 28504772 28504801 -66767850 - MIR SINE MIR -155 107 79 1 802 213 39 0 0 chr17 28504843 28504869 -66767782 + (T)n Simple_repeat Simple_repeat 1 26 0 1 802 1228 49 0 0 chr17 28504869 28505013 -66767638 - B1_Mus1 SINE Alu 0 148 5 1 802 1051 39 8 0 chr17 28505030 28505158 -66767493 - B1_Mus1 SINE Alu 0 148 20 1 802 548 249 38 14 chr17 28505194 28505354 -66767297 - B3 SINE B2 -15 178 20 1 802 1222 48 14 0 chr17 28505854 28505999 -66766652 + B1_Mm SINE Alu 1 147 0 1 802 207 69 0 0 chr17 28506099 28506128 -66766523 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 1 802 411 275 43 21 chr17 28506303 28506444 -66766207 - ORR1D2 LTR MaLR -226 144 1 2 802 405 252 28 9 chr17 28506594 28506702 -66765949 + ID_B1 SINE B4 103 212 -12 2 802 378 0 0 0 chr17 28506747 28506789 -66765862 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 2 802 935 52 0 0 chr17 28506789 28506904 -66765747 - B2_Mm1a SINE B2 -33 160 46 2 802 1207 115 27 21 chr17 28507018 28507205 -66765446 - B2_Mm2 SINE B2 -7 188 1 2 802 777 179 0 0 chr17 28507259 28507382 -66765269 + B1_Mus2 SINE Alu 12 134 -13 2 802 669 146 0 0 chr17 28507597 28507700 -66764951 - B1_Mur3 SINE Alu -5 144 42 2 802 262 85 0 161 chr17 28507650 28507706 -66764945 - 4.5SRNA scRNA scRNA -8 86 40 2 802 208 156 0 0 chr17 28507706 28507738 -66764913 + (TCTCTG)n Simple_repeat Simple_repeat 1 32 0 2 802 243 0 318 0 chr17 28507729 28507861 -66764790 + (CCTG)n Simple_repeat Simple_repeat 2 175 0 2 802 763 330 0 0 chr17 28507822 28508001 -66764650 + C-rich Low_complexity Low_complexity 2 180 0 3 802 447 106 0 0 chr17 28508102 28508168 -66764483 + (CA)n Simple_repeat Simple_repeat 1 66 0 3 802 300 53 0 0 chr17 28508172 28508210 -66764441 + (TC)n Simple_repeat Simple_repeat 2 39 0 3 802 191 273 23 0 chr17 28509135 28509179 -66763472 - MIR SINE MIR -102 106 62 3 802 284 155 18 18 chr17 28509409 28509479 -66763172 + MIRm SINE MIR 67 139 -137 3 802 1333 100 11 0 chr17 28509889 28510079 -66762572 - B2_Mm1t SINE B2 -1 192 1 3 802 393 222 50 10 chr17 28510128 28510228 -66762423 - PB1D9 SINE Alu 0 120 17 3 802 358 210 134 12 chr17 28510369 28510451 -66762200 + PB1D7 SINE Alu 18 109 -11 3 802 344 87 0 0 chr17 28510574 28510620 -66762031 - URR1B DNA MER1_type -39 186 141 3 802 570 247 24 65 chr17 28510594 28510621 -66762030 + ID_B1 SINE B4 63 224 0 3 802 1030 86 0 14 chr17 28510621 28510763 -66761888 + B1_Mur4 SINE Alu 9 148 -2 4 802 277 150 0 83 chr17 28511007 28511116 -66761535 + CT-rich Low_complexity Low_complexity 1 100 0 4 802 197 33 0 32 chr17 28511305 28511336 -66761315 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 4 802 189 0 0 0 chr17 28511502 28511523 -66761128 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 802 328 238 119 0 chr17 28511670 28511754 -66760897 - B4A SINE B4 -83 209 116 4 802 405 319 68 34 chr17 28511751 28511823 -66760828 - MT2A LTR ERVL -5 528 455 4 802 844 113 0 7 chr17 28511823 28511974 -66760677 + L1_Mus4 LINE L1 6486 6635 -1 4 802 405 319 68 34 chr17 28511974 28512196 -66760455 - MT2A LTR ERVL -79 454 224 4 802 550 208 24 8 chr17 28512363 28512489 -66760162 - B4A SINE B4 -163 129 2 4 802 2003 153 144 106 chr17 28513105 28513276 -66759375 - RMER4B LTR ERVK 0 585 446 4 802 252 0 0 0 chr17 28513276 28513304 -66759347 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 802 183 42 0 0 chr17 28513304 28513328 -66759323 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4 802 2003 153 144 106 chr17 28513328 28513719 -66758932 - RMER4B LTR ERVK -140 445 2 4 802 276 369 37 8 chr17 28513733 28513867 -66758784 + MLT1A1 LTR MaLR 270 407 -1 5 802 1314 106 16 11 chr17 28513867 28514058 -66758593 + B2_Mm2 SINE B2 3 194 -1 5 802 554 218 107 20 chr17 28514235 28514385 -66758266 - RSINE1 SINE B4 0 165 3 5 802 1486 70 37 0 chr17 28514406 28514593 -66758058 - B2_Mm2 SINE B2 0 195 2 5 802 619 229 123 74 chr17 28514833 28514879 -66757772 - ID_B1 SINE B4 -9 215 170 5 802 1693 21 0 10 chr17 28514879 28515073 -66757578 - B2_Mm1a SINE B2 -1 192 1 5 802 619 229 123 74 chr17 28515073 28515229 -66757422 - ID_B1 SINE B4 -55 169 3 5 802 183 42 0 0 chr17 28515274 28515298 -66757353 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 802 679 118 30 9 chr17 28515301 28515434 -66757217 - B1_Mus2 SINE Alu 0 149 8 5 802 552 265 52 71 chr17 28515413 28515624 -66757027 - B3A SINE B2 -8 208 2 5 802 467 288 181 20 chr17 28515863 28516111 -66756540 + B4 SINE B4 1 288 -4 5 802 676 153 118 37 chr17 28516163 28516299 -66756352 + B1_Mur2 SINE Alu 2 148 -1 6 802 311 247 151 0 chr17 28516317 28516390 -66756261 + PB1D7 SINE Alu 1 84 -36 6 802 409 293 88 33 chr17 28516408 28516510 -66756141 + RLTR11A2 LTR ERVK 301 412 -115 6 802 973 110 59 0 chr17 28516510 28516646 -66756005 + B1_Mus1 SINE Alu 4 147 -1 6 802 409 293 88 33 chr17 28516646 28516758 -66755893 + RLTR11A2 LTR ERVK 413 527 0 6 802 490 272 247 0 chr17 28516758 28516916 -66755735 - ID_B1 SINE B4 -27 197 1 6 802 702 207 154 36 chr17 28518381 28518576 -66754075 - RMER4B LTR ERVK -339 246 29 6 802 2347 61 22 28 chr17 28518588 28518910 -66753741 - ORR1A2 LTR MaLR -7 320 1 6 802 1243 108 49 0 chr17 28518928 28519113 -66753538 - B2_Mm2 SINE B2 0 195 2 6 802 278 280 97 97 chr17 28519174 28519360 -66753291 - MLT1H LTR MaLR -344 205 20 6 802 499 263 7 50 chr17 28519473 28519494 -66753157 + ID_B1 SINE B4 65 198 -26 6 802 629 235 8 0 chr17 28519494 28519613 -66753038 + B1F SINE Alu 1 120 -29 7 802 722 139 9 0 chr17 28519621 28519736 -66752915 + B1_Mm SINE Alu 32 147 0 7 802 282 156 0 0 chr17 28519740 28519804 -66752847 + A-rich Low_complexity Low_complexity 1 64 0 7 802 649 188 7 2 chr17 28520183 28520660 -66751991 + (TG)n Simple_repeat Simple_repeat 1 479 0 7 802 276 209 0 0 chr17 28520676 28520762 -66751889 + (TG)n Simple_repeat Simple_repeat 1 86 0 7 802 236 206 48 0 chr17 28520805 28520868 -66751783 + ID_B1 SINE B4 90 155 -69 7 802 479 250 148 23 chr17 28520869 28521045 -66751606 + B3A SINE B2 1 198 0 7 802 587 127 0 10 chr17 28521050 28521062 -66751589 + (GAAA)n Simple_repeat Simple_repeat 2 13 0 7 802 1260 34 7 0 chr17 28521062 28521209 -66751442 + B1_Mus1 SINE Alu 1 148 0 7 802 587 127 0 10 chr17 28521209 28521299 -66751352 + (GAAA)n Simple_repeat Simple_repeat 2 90 0 7 802 407 202 35 23 chr17 28521299 28521385 -66751266 + ID_B1 SINE B4 130 216 -8 7 802 253 204 61 0 chr17 28521342 28521391 -66751260 + PB1D9 SINE Alu 67 118 -2 7 802 463 278 20 101 chr17 28521404 28521552 -66751099 + B3 SINE B2 81 216 0 8 802 398 237 61 9 chr17 28522177 28522292 -66750359 - ID_B1 SINE B4 -22 202 82 8 802 1150 89 0 0 chr17 28522422 28522568 -66750083 - B1_Mus2 SINE Alu 0 147 2 8 802 603 0 0 0 chr17 28522603 28522670 -66749981 + (TA)n Simple_repeat Simple_repeat 1 67 0 8 802 820 210 158 21 chr17 28522671 28522861 -66749790 - B3 SINE B2 0 216 1 8 802 1000 214 9 65 chr17 28522923 28523138 -66749513 - B3 SINE B2 -13 203 1 8 802 237 307 93 34 chr17 28523146 28523264 -66749387 + MLT1J LTR MaLR 69 193 -319 8 802 809 241 69 0 chr17 28523813 28523987 -66748664 + B3 SINE B2 1 186 -30 8 802 1939 168 88 70 chr17 28523993 28524054 -66748597 - RLTR20A LTR ERVK 0 541 494 8 802 1720 34 0 0 chr17 28524054 28524259 -66748392 - L1Md_A LINE L1 0 6582 6378 8 802 1939 168 88 70 chr17 28524259 28524303 -66748348 - RLTR20A LTR ERVK -48 493 433 8 802 234 0 0 0 chr17 28524303 28524329 -66748322 + (CA)n Simple_repeat Simple_repeat 2 27 0 9 802 1939 168 88 70 chr17 28524329 28524753 -66747898 - RLTR20A LTR ERVK -109 432 2 8 802 609 237 77 26 chr17 28524801 28524962 -66747689 + B3A SINE B2 1 149 -46 9 802 306 0 0 0 chr17 28524962 28524996 -66747655 + (CA)n Simple_repeat Simple_repeat 2 35 0 9 802 345 176 349 9 chr17 28525426 28525535 -66747116 - B1_Mur2 SINE Alu -3 146 1 9 802 513 210 164 92 chr17 28525850 28526002 -66746649 - RSINE1 SINE B4 0 165 3 9 802 219 45 21 64 chr17 28526826 28526873 -66745778 + (TTTC)n Simple_repeat Simple_repeat 4 48 0 9 802 985 134 12 0 chr17 28526873 28527045 -66745606 + (TTC)n Simple_repeat Simple_repeat 1 174 0 9 802 587 90 157 0 chr17 28527045 28527134 -66745517 - B1_Mus2 SINE Alu -44 103 1 9 802 225 167 77 77 chr17 28527089 28527141 -66745510 - B4A SINE B4 -158 134 83 9 802 1555 27 43 0 chr17 28527155 28527340 -66745311 - B2_Mm1a SINE B2 0 193 1 9 802 381 185 130 0 chr17 28527361 28527453 -66745198 - ID_B1 SINE B4 -3 221 118 1 802 1308 87 0 0 chr17 28527582 28527755 -66744896 - B2_Mm2 SINE B2 -19 176 4 1 802 434 0 0 51 chr17 28527769 28527786 -66744865 + (T)n Simple_repeat Simple_repeat 1 17 0 1 802 1662 36 0 0 chr17 28527786 28527978 -66744673 - B2_Mm1t SINE B2 0 193 2 1 802 434 0 0 51 chr17 28527978 28528019 -66744632 + (T)n Simple_repeat Simple_repeat 1 39 0 1 802 1293 40 0 0 chr17 28528019 28528167 -66744484 - B1_Mus1 SINE Alu 0 148 1 1 802 425 311 99 6 chr17 28528171 28528352 -66744299 - B3A SINE B2 0 198 1 1 802 195 167 0 0 chr17 28529032 28529074 -66743577 + G-rich Low_complexity Low_complexity 1 42 0 1 802 1290 98 60 0 chr17 28529406 28529590 -66743061 + B2_Mm2 SINE B2 1 195 0 1 802 296 327 113 19 chr17 28529823 28529929 -66742722 - PB1D10 SINE Alu -1 116 1 1 802 198 0 0 0 chr17 28529936 28529958 -66742693 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 802 764 169 51 7 chr17 28529971 28530108 -66742543 - B1_Mus1 SINE Alu -1 147 5 1 802 1489 76 16 0 chr17 28530176 28530361 -66742290 + B2_Mm2 SINE B2 2 189 -6 1 802 312 259 13 104 chr17 28530451 28530604 -66742047 - B3A SINE B2 -77 139 6 1 802 1315 87 11 0 chr17 28530604 28530787 -66741864 + B2_Mm1t SINE B2 9 193 0 1 802 229 231 121 0 chr17 28530795 28530886 -66741765 + L1M4 LINE L1 2409 2510 -3636 1 802 270 242 48 0 chr17 28531026 28531088 -66741563 + RSINE1 SINE B4 99 163 -2 1 802 639 219 39 84 chr17 28531154 28531438 -66741213 + L1M4 LINE L1 2687 2951 -3189 1 802 800 232 10 80 chr17 28531445 28531630 -66741021 + B3 SINE B2 5 178 -38 1 802 2033 155 9 65 chr17 28531630 28532064 -66740587 + RMER17C LTR ERVK 1 410 0 1 802 800 232 10 80 chr17 28532064 28532079 -66740572 + B3 SINE B2 179 191 -25 1 802 225 108 0 0 chr17 28532241 28532278 -66740373 + (CTG)n Simple_repeat Simple_repeat 1 37 0 1 802 1243 228 119 38 chr17 28532279 28532648 -66740003 - RLTR26 LTR ERVK -243 399 1 1 802 569 312 38 6 chr17 28532648 28532806 -66739845 + B3A SINE B2 8 170 -28 1 802 1371 90 16 21 chr17 28533177 28533369 -66739282 - B2_Mm2 SINE B2 -3 192 2 1 802 189 0 0 0 chr17 28533430 28533451 -66739200 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 802 583 333 18 58 chr17 28533822 28534045 -66738606 + B4A SINE B4 1 214 -78 1 802 1322 80 0 22 chr17 28534058 28534238 -66738413 - B2_Mm2 SINE B2 -19 176 1 1 802 898 208 50 8 chr17 28534299 28534504 -66738147 + ORR1D1 LTR MaLR 1 214 -170 1 802 1054 96 28 73 chr17 28534519 28534698 -66737953 - B2_Mm2 SINE B2 -24 171 1 1 802 420 224 18 36 chr17 28534698 28534792 -66737859 + ORR1D1 LTR MaLR 264 355 -15 1 802 285 308 11 11 chr17 28534770 28534862 -66737789 - 5S rRNA rRNA -29 92 1 1 802 1035 205 16 5 chr17 28534891 28535077 -66737574 + B3 SINE B2 1 188 -28 1 802 1341 204 112 63 chr17 28535073 28535512 -66737139 + RMER4B LTR ERVK 51 519 -66 1 802 1369 78 15 30 chr17 28535576 28535774 -66736877 + B2_Mm2 SINE B2 1 195 0 1 802 674 254 46 36 chr17 28535806 28536002 -66736649 + B3A SINE B2 1 198 0 1 802 379 170 272 18 chr17 28538489 28538603 -66734048 - B1_Mus1 SINE Alu -5 143 1 1 802 4801 53 12 3 chr17 28538629 28539230 -66733421 - L1_Mus3 LINE L1 -10 6628 6023 1 802 351 270 81 0 chr17 28539255 28539366 -66733285 + PB1D9 SINE Alu 1 120 0 1 802 763 41 0 0 chr17 28540015 28540113 -66732538 - B1_Mus1 SINE Alu -45 103 6 1 802 431 236 50 74 chr17 28540113 28540175 -66732476 - MT2B LTR ERVL -319 250 95 1 802 387 0 0 0 chr17 28540341 28540384 -66732267 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 802 381 43 0 0 chr17 28540441 28540488 -66732163 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 802 458 316 109 59 chr17 28540490 28540729 -66731922 - B4A SINE B4 -40 252 2 1 802 272 322 79 63 chr17 28540779 28540833 -66731818 + ID SINE ID 32 82 -142 1 802 1100 90 14 0 chr17 28540833 28540978 -66731673 + B1_Mur4 SINE Alu 1 147 -3 1 802 272 322 79 63 chr17 28540978 28541112 -66731539 + ID_B1 SINE B4 83 223 -1 1 802 222 293 210 8 chr17 28541174 28541298 -66731353 + RSINE1 SINE B4 11 159 -6 1 802 547 280 38 6 chr17 28541326 28541475 -66731176 + B3A SINE B2 2 156 -42 1 802 312 27 0 0 chr17 28541475 28541512 -66731139 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 802 547 303 47 35 chr17 28541512 28541579 -66731072 + B3A SINE B2 153 216 0 1 802 1036 67 7 0 chr17 28541687 28541822 -66730829 + B1_Mm SINE Alu 12 147 0 1 802 279 0 0 0 chr17 28541822 28541853 -66730798 + (A)n Simple_repeat Simple_repeat 1 31 0 1 802 360 0 0 0 chr17 28541875 28541915 -66730736 + (T)n Simple_repeat Simple_repeat 1 40 0 1 802 1034 128 47 30 chr17 28542120 28542289 -66730362 + B2_Mm2 SINE B2 4 175 -20 1 802 545 301 35 7 chr17 28542306 28542450 -66730201 - RSINE1 SINE B4 -8 157 10 1 802 457 236 45 0 chr17 28542460 28542549 -66730102 - PB1D10 SINE Alu -6 111 19 1 802 733 124 7 98 chr17 28542565 28542708 -66729943 + ORR1C2 LTR MaLR 6 135 -249 1 802 473 169 52 0 chr17 28542709 28542786 -66729865 + ID4_ SINE ID 3 83 0 1 802 234 313 24 24 chr17 28543902 28543980 -66728671 - PB1D10 SINE Alu 0 117 40 1 802 756 192 115 6 chr17 28543980 28544137 -66728514 - URR1A DNA MER1_type 0 226 53 1 802 229 181 103 77 chr17 28545099 28545177 -66727474 - Charlie19a DNA Charlie -33 353 274 1 802 270 0 0 0 chr17 28545588 28545618 -66727033 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1 802 1444 32 30 79 chr17 28545621 28545824 -66726827 + B2_Mm1a SINE B2 1 193 0 1 802 652 207 64 0 chr17 28545921 28546061 -66726590 - B1_Mur3 SINE Alu 0 149 1 1 802 1400 94 11 0 chr17 28546464 28546655 -66725996 - B2_Mm1t SINE B2 0 193 1 1 802 1005 183 32 0 chr17 28546831 28547017 -66725634 - B2_Mm2 SINE B2 -1 194 3 1 802 356 226 189 45 chr17 28548051 28548162 -66724489 - ID_B1 SINE B4 0 224 98 1 802 251 229 221 99 chr17 28548162 28548182 -66724469 - B1F1 SINE Alu 0 149 3 1 802 408 227 6 159 chr17 28549642 28549799 -66722852 + MT2B LTR ERVL 132 264 -337 1 802 936 113 0 72 chr17 28549690 28549843 -66722808 + B1_Mur4 SINE Alu 9 150 0 1 802 183 80 0 0 chr17 28549844 28549869 -66722782 + (GAAAA)n Simple_repeat Simple_repeat 2 26 0 1 802 732 107 19 5 chr17 28550379 28550496 -66722155 + B2_Mm2 SINE B2 3 116 -100 1 802 239 200 55 0 chr17 28551208 28551263 -66721388 + RLTR6_Mm LTR ERV1 220 277 -377 1 802 206 222 37 0 chr17 28551519 28551573 -66721078 - MIRc SINE MIR -144 124 69 1 802 723 167 8 38 chr17 28551840 28551971 -66720680 + B1_Mur4 SINE Alu 24 150 0 1 802 228 185 0 53 chr17 28552071 28552128 -66720523 + L1MCc LINE L1 179 232 -6191 1 802 226 338 0 27 chr17 28553419 28553492 -66719159 - PB1D10 SINE Alu -33 84 14 1 802 221 300 24 59 chr17 28554579 28554664 -66717987 + ID4_ SINE ID 1 82 -1 1 802 2955 58 21 44 chr17 28555129 28555280 -66717371 - BGLII LTR ERVK 0 421 288 1 802 617 49 0 0 chr17 28555280 28555362 -66717289 + L1Md_T LINE L1 6501 6582 0 1 802 2955 58 21 44 chr17 28555362 28555641 -66717010 - BGLII LTR ERVK -134 287 1 1 802 1115 81 133 6 chr17 28555642 28555815 -66716836 + B2_Mm2 SINE B2 1 195 0 1 802 575 230 124 70 chr17 28555982 28556183 -66716468 + B3 SINE B2 1 212 -4 1 802 384 258 44 59 chr17 28556197 28556333 -66716318 - B3A SINE B2 0 198 65 1 802 273 318 27 9 chr17 28558070 28558181 -66714470 + B1F2 SINE Alu 34 146 -3 1 802 241 317 10 165 chr17 28558220 28558420 -66714231 + ID_B1 SINE B4 1 169 -55 1 802 265 205 71 71 chr17 28558363 28558447 -66714204 + PB1D7 SINE Alu 36 119 -1 1 802 1030 203 20 10 chr17 28558447 28558651 -66714000 + B3 SINE B2 1 206 -10 1 802 750 185 27 7 chr17 28559097 28559244 -66713407 - B1_Mur4 SINE Alu 0 150 1 1 802 186 150 0 0 chr17 28559365 28559405 -66713246 + (T)n Simple_repeat Simple_repeat 1 40 0 1 802 857 142 6 86 chr17 28559540 28559702 -66712949 + B1_Mur4 SINE Alu 2 150 0 1 802 569 278 25 62 chr17 28559946 28560010 -66712641 - B4A SINE B4 -6 286 224 1 802 701 174 0 0 chr17 28560010 28560125 -66712526 - PB1D9 SINE Alu -5 115 1 1 802 569 278 25 62 chr17 28560125 28560221 -66712430 - B4A SINE B4 -69 223 132 1 802 330 333 81 0 chr17 28560277 28560400 -66712251 - B3A SINE B2 -17 181 49 1 802 333 178 107 45 chr17 28561268 28561380 -66711271 - MER5B DNA MER1_type -6 172 54 1 802 870 153 7 0 chr17 28561690 28561834 -66710817 - B1_Mur2 SINE Alu 0 149 5 1 802 851 274 0 0 chr17 28563016 28563206 -66709445 - B3 SINE B2 -12 204 15 1 802 1103 78 19 0 chr17 28563233 28563387 -66709264 + B2_Mm2 SINE B2 1 157 -38 1 802 288 0 0 0 chr17 28563387 28563419 -66709232 + (CAAT)n Simple_repeat Simple_repeat 2 33 0 1 802 378 49 16 0 chr17 28563443 28563504 -66709147 + B2_Mm1a SINE B2 127 188 -5 1 802 421 298 183 76 chr17 28563570 28564017 -66708634 + L1MC4a LINE L1 6689 7183 -699 1 802 231 114 0 0 chr17 28564210 28564245 -66708406 + (ATG)n Simple_repeat Simple_repeat 3 37 0 1 802 941 38 105 8 chr17 28564371 28564496 -66708155 + B1_Mus2 SINE Alu 2 138 -9 1 802 207 0 0 0 chr17 28564496 28564519 -66708132 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 802 696 161 0 0 chr17 28566670 28566788 -66705863 + B3 SINE B2 1 118 -98 1 802 573 153 117 0 chr17 28566789 28566900 -66705751 + B1_Mur2 SINE Alu 26 149 0 2 802 1186 102 68 0 chr17 28567324 28567501 -66705150 + B2_Mm1t SINE B2 1 189 -4 2 802 345 223 10 69 chr17 28567548 28567649 -66705002 - RSINE1 SINE B4 -4 161 67 2 802 347 231 38 83 chr17 28567866 28567998 -66704653 - ID_B1 SINE B4 -7 217 92 2 802 575 325 86 42 chr17 28568836 28569337 -66703314 + MER90a LTR ERV1 6 528 -86 2 802 295 282 88 20 chr17 28569410 28569592 -66703059 + MER90 LTR ERV1 424 606 -8 2 802 22 0 0 0 chr17 28569834 28569856 -66702795 + AT_rich Low_complexity Low_complexity 1 22 0 2 802 438 296 125 0 chr17 28570013 28570253 -66702398 + B4A SINE B4 21 290 -2 2 802 698 251 126 58 chr17 28570520 28570846 -66701805 - L1MB2 LINE L1 -30 6141 5794 2 802 962 65 14 7 chr17 28570846 28570986 -66701665 + B1_Mur4 SINE Alu 10 150 0 2 802 327 197 13 13 chr17 28570997 28571074 -66701577 + B3 SINE B2 2 78 -138 2 802 198 0 0 0 chr17 28571108 28571130 -66701521 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 2 802 467 267 83 19 chr17 28571138 28571340 -66701311 + L1M3 LINE L1 5593 5802 -382 2 802 584 216 95 22 chr17 28572451 28572588 -66700063 + B1_Mur2 SINE Alu 3 149 0 2 802 21 0 0 0 chr17 28572751 28572772 -66699879 + AT_rich Low_complexity Low_complexity 1 21 0 2 802 348 289 25 34 chr17 28572795 28572868 -66699783 - PB1D10 SINE Alu 0 117 47 2 802 2284 122 119 3 chr17 28572868 28573245 -66699406 + MTC LTR MaLR 1 421 0 2 802 348 289 25 34 chr17 28573245 28573289 -66699362 - PB1D10 SINE Alu -71 46 2 2 100 918 255 135 12 chr17 28573676 28574077 -66698574 - Charlie1a DNA MER1_type -567 888 439 2 803 1356 84 6 0 chr17 28574374 28574552 -66698099 + B2_Mm1t SINE B2 1 179 -14 2 803 241 241 79 22 chr17 28574627 28574716 -66697935 - L1MB2 LINE L1 -1 6170 6077 2 803 227 200 0 0 chr17 28574836 28574903 -66697748 + A-rich Low_complexity Low_complexity 1 67 0 2 803 355 232 85 0 chr17 28575309 28575391 -66697260 + B1F1 SINE Alu 49 137 -12 2 803 189 0 0 0 chr17 28576043 28576064 -66696587 + (TTA)n Simple_repeat Simple_repeat 1 21 0 2 803 207 0 0 0 chr17 28576541 28576564 -66696087 + (CCTG)n Simple_repeat Simple_repeat 2 24 0 2 803 277 219 57 76 chr17 28576580 28576717 -66695934 + MLT1A LTR MaLR 233 405 -3 2 803 496 186 42 8 chr17 28576959 28577078 -66695573 + B1F1 SINE Alu 10 132 -17 2 803 652 322 5 29 chr17 28577175 28577383 -66695268 + B4A SINE B4 49 251 -41 2 803 348 135 53 26 chr17 28578693 28578769 -66693882 - B1_Mur2 SINE Alu -40 109 32 2 803 334 250 66 19 chr17 28578907 28579013 -66693638 - PB1D10 SINE Alu -6 111 1 2 803 816 282 89 19 chr17 28579818 28580187 -66692464 + RCHARR1 DNA MER1_type 75 469 -505 2 803 877 224 42 0 chr17 28580184 28580398 -66692253 + RCHARR1 DNA MER1_type 748 970 -4 2 803 631 114 65 19 chr17 28580408 28580515 -66692136 + PB1D9 SINE Alu 2 113 -7 2 803 633 239 131 10 chr17 28580678 28580869 -66691782 + B3 SINE B2 4 195 0 2 803 302 219 60 12 chr17 28580917 28581000 -66691651 + PB1D10 SINE Alu 21 107 -10 2 803 321 26 0 0 chr17 28581049 28581087 -66691564 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 803 806 189 13 13 chr17 28581501 28581651 -66691000 + B1_Mur4 SINE Alu 1 150 0 2 803 245 51 26 0 chr17 28581661 28581700 -66690951 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 2 803 247 221 68 5 chr17 28582914 28583007 -66689644 + B4A SINE B4 86 185 -107 2 803 571 284 32 13 chr17 28583007 28583164 -66689487 + RSINE1 SINE B4 1 160 -5 2 803 451 170 119 50 chr17 28583323 28583483 -66689168 + L1MB4 LINE L1 6022 6182 -1 2 803 382 245 47 0 chr17 28583805 28583911 -66688740 + 7SK RNA RNA 1 111 -220 2 803 530 196 19 9 chr17 28584042 28584150 -66688501 - PB1D9 SINE Alu -2 118 10 2 803 866 215 124 0 chr17 28585757 28585943 -66686708 - B3 SINE B2 -5 211 3 2 803 1553 42 0 25 chr17 28585963 28586159 -66686492 + B2_Mm1a SINE B2 2 192 -1 2 803 527 116 0 34 chr17 28586709 28586798 -66685853 - B1_Mur4 SINE Alu -15 135 50 2 803 588 213 183 6 chr17 28587725 28587900 -66684751 + B3 SINE B2 2 207 -9 2 803 306 0 0 0 chr17 28587911 28587945 -66684706 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 2 803 1519 47 15 20 chr17 28588102 28588297 -66684354 - B2_Mm2 SINE B2 0 195 2 2 803 522 209 114 23 chr17 28588300 28588432 -66684219 - B1_Mur2 SINE Alu 0 149 6 2 803 484 87 0 0 chr17 28588469 28588538 -66684113 + L1_Mus1 LINE L1 6499 6567 0 2 803 225 87 43 0 chr17 28589211 28589257 -66683394 + B3 SINE B2 164 211 -5 2 803 303 302 23 14 chr17 28589973 28590138 -66682513 - MLT1D LTR MaLR -5 500 297 2 803 611 294 99 16 chr17 28590239 28590491 -66682160 - B4A SINE B4 -6 286 14 2 803 202 0 91 0 chr17 28590906 28590939 -66681712 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2 803 469 176 110 0 chr17 28590939 28591030 -66681621 - B1_Mur4 SINE Alu -2 148 48 2 803 1111 270 91 51 chr17 28591798 28592251 -66680400 + RLTR18B LTR ERVK 10 480 -32 2 803 1150 186 18 13 chr17 28592254 28592478 -66680173 + RLTR18-int LTR ERVK 3930 4154 -1207 2 803 589 131 221 0 chr17 28592487 28592609 -66680042 + B1_Mur4 SINE Alu 2 150 0 2 803 201 162 0 0 chr17 28592609 28592646 -66680005 + A-rich Low_complexity Low_complexity 1 37 0 2 803 745 224 24 44 chr17 28592646 28592851 -66679800 + RLTR18-int LTR ERVK 4145 4345 -1016 2 803 3385 39 24 70 chr17 28592932 28593400 -66679251 + L1Md_F2 LINE L1 6133 6578 -4 2 803 292 252 224 9 chr17 28593411 28593527 -66679124 - B3 SINE B2 0 216 76 2 803 652 93 0 36 chr17 28593547 28593659 -66678992 + (TTCC)n Simple_repeat Simple_repeat 3 110 0 2 803 983 121 7 0 chr17 28593661 28593801 -66678850 - B1_Mur4 SINE Alu -7 143 3 2 803 227 264 0 0 chr17 28593860 28593913 -66678738 - L1MEc LINE L1 -2481 3838 3786 2 803 1120 43 43 7 chr17 28593913 28594054 -66678597 + B1_Mm SINE Alu 2 147 0 2 803 186 71 0 0 chr17 28594056 28594084 -66678567 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 2 803 416 314 85 32 chr17 28594213 28594496 -66678155 - L1MD LINE L1 -2770 3376 3079 2 803 1328 101 5 5 chr17 28594496 28594686 -66677965 - B2_Mm2 SINE B2 -3 192 3 2 803 594 172 25 33 chr17 28594894 28595014 -66677637 - PB1D9 SINE Alu 0 120 2 2 803 1012 181 87 10 chr17 28595036 28595231 -66677420 - B3 SINE B2 -5 211 2 2 803 883 144 7 27 chr17 28595239 28595389 -66677262 - B1_Mur2 SINE Alu 0 149 3 2 803 574 295 80 21 chr17 28595829 28596016 -66676635 - B3A SINE B2 0 198 1 2 803 350 306 134 22 chr17 28596023 28596327 -66676324 - L1MEc LINE L1 -3767 2552 2226 2 803 204 67 0 0 chr17 28596353 28596383 -66676268 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2 803 961 285 169 8 chr17 28596684 28597085 -66675566 - L1MEc LINE L1 -5397 1003 534 2 803 407 230 107 29 chr17 28597085 28597188 -66675463 - PB1D10 SINE Alu -6 111 1 2 803 961 285 169 8 chr17 28597188 28597264 -66675387 - L1MEc LINE L1 -5867 533 449 2 803 308 248 116 39 chr17 28597335 28597490 -66675161 - L1MEc LINE L1 -6127 273 107 2 803 340 295 71 0 chr17 28597823 28597935 -66674716 - PB1D9 SINE Alu 0 120 1 2 803 956 129 0 20 chr17 28597943 28598093 -66674558 - B1_Mus2 SINE Alu 0 147 1 2 803 375 211 16 58 chr17 28598235 28598356 -66674295 - PB1D10 SINE Alu 0 117 2 2 803 1895 194 64 10 chr17 28598634 28599024 -66673627 - Lx9 LINE L1 -571 7073 6663 2 803 425 241 36 27 chr17 28599001 28599112 -66673539 - Lx9 LINE L1 -1171 6473 6362 2 803 683 228 0 0 chr17 28599161 28599288 -66673363 + B1_Mur4 SINE Alu 3 129 -21 2 803 460 257 28 0 chr17 28599508 28599617 -66673034 + PB1D7 SINE Alu 1 112 -8 2 803 454 304 67 100 chr17 28599918 28600368 -66672283 + L1M4 LINE L1 4562 4996 -1150 2 803 462 229 48 0 chr17 28600382 28600487 -66672164 + PB1D10 SINE Alu 1 110 -7 2 803 219 361 87 22 chr17 28600881 28601156 -66671495 - L2 LINE L2 -337 3082 2790 2 803 231 291 105 19 chr17 28601639 28601744 -66670907 + L1MC LINE L1 5528 5641 -2241 2 803 732 290 110 15 chr17 28601837 28602100 -66670551 - B4A SINE B4 -1 291 4 2 803 1238 48 0 0 chr17 28602179 28602326 -66670325 + B1_Mus2 SINE Alu 1 147 0 2 803 22 0 0 0 chr17 28602663 28602685 -66669966 + AT_rich Low_complexity Low_complexity 1 22 0 2 803 906 156 190 22 chr17 28602736 28602920 -66669731 + B3 SINE B2 2 216 0 2 803 24 53 0 0 chr17 28602920 28602958 -66669693 + AT_rich Low_complexity Low_complexity 1 38 0 2 803 254 327 56 0 chr17 28603077 28603184 -66669467 - L2b LINE L2 -2 3373 3261 2 803 262 260 134 10 chr17 28603377 28603474 -66669177 - PB1D10 SINE Alu -8 109 1 2 803 353 252 212 0 chr17 28603907 28604006 -66668645 + PB1D10 SINE Alu 6 125 -2 2 803 926 148 0 39 chr17 28604077 28604232 -66668419 + B1_Mur2 SINE Alu 1 149 0 2 803 222 62 0 0 chr17 28604508 28604540 -66668111 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2 803 1171 55 0 14 chr17 28604590 28604738 -66667913 - B1_Mus2 SINE Alu 0 147 2 2 803 252 280 62 66 chr17 28605262 28605518 -66667133 + L4 LINE RTE 1707 1961 -68 2 803 24 53 0 0 chr17 28605827 28605865 -66666786 + AT_rich Low_complexity Low_complexity 1 38 0 2 803 667 153 83 8 chr17 28606241 28606373 -66666278 + B1_Mur2 SINE Alu 1 142 -7 2 803 291 277 0 3 chr17 28606411 28606502 -66666149 + ID4 SINE ID 18 107 -45 2 803 814 106 0 0 chr17 28606632 28606755 -66665896 + B1_Mus2 SINE Alu 1 123 -24 2 803 419 92 15 0 chr17 28606884 28606949 -66665702 + (GAAA)n Simple_repeat Simple_repeat 1 66 0 2 803 227 257 0 41 chr17 28607717 28607790 -66664861 + RSINE1 SINE B4 96 165 0 3 803 306 253 80 50 chr17 28608369 28608469 -66664182 - PB1D9 SINE Alu 0 120 18 3 803 808 203 80 0 chr17 28608469 28608656 -66663995 - B3 SINE B2 -11 205 4 3 803 838 115 0 14 chr17 28608755 28608896 -66663755 - B1_Mur3 SINE Alu -2 147 9 3 803 553 254 236 13 chr17 28609010 28609317 -66663334 - MTEb LTR MaLR 0 379 4 3 803 199 353 57 40 chr17 28609846 28610023 -66662628 - MIR SINE MIR -40 222 43 3 803 252 0 0 0 chr17 28610042 28610070 -66662581 + (G)n Simple_repeat Simple_repeat 1 28 0 3 803 1659 42 0 0 chr17 28610073 28610264 -66662387 + B2_Mm1a SINE B2 3 193 0 3 803 1109 35 0 0 chr17 28610279 28610422 -66662229 + B1_Mus1 SINE Alu 6 148 0 3 803 742 252 82 0 chr17 28610455 28610661 -66661990 + ID_B1 SINE B4 1 223 -1 3 803 273 369 43 6 chr17 28611034 28611195 -66661456 + ID_B1 SINE B4 1 167 -57 3 803 1118 89 0 0 chr17 28611484 28611630 -66661021 + B1_Mus2 SINE Alu 2 147 0 3 803 213 39 0 0 chr17 28611630 28611656 -66660995 + (A)n Simple_repeat Simple_repeat 1 26 0 3 803 891 266 63 11 chr17 28611854 28612124 -66660527 - B4A SINE B4 -8 284 1 3 803 324 245 38 38 chr17 28612519 28612625 -66660026 - B3A SINE B2 -90 108 3 3 803 921 176 109 21 chr17 28612657 28612849 -66659802 - B3 SINE B2 -6 210 2 3 803 288 299 39 13 chr17 28612868 28612946 -66659705 + PB1D10 SINE Alu 33 112 -5 3 803 343 258 54 0 chr17 28613240 28613278 -66659373 + L1MDa LINE L1 2403 2442 -4191 3 803 1451 73 11 0 chr17 28613278 28613469 -66659182 + B2_Mm1t SINE B2 1 193 0 3 803 343 258 54 0 chr17 28613469 28613523 -66659128 + L1MDa LINE L1 2443 2499 -4134 3 803 444 232 214 57 chr17 28614601 28614824 -66657827 + B4 SINE B4 1 269 -23 3 803 390 17 51 0 chr17 28614824 28614883 -66657768 + (CA)n Simple_repeat Simple_repeat 2 63 0 3 803 365 216 105 128 chr17 28614883 28614918 -66657733 + B4A SINE B4 270 292 0 3 803 352 267 111 7 chr17 28614961 28615237 -66657414 - L1ME2 LINE L1 -94 6068 5662 3 803 755 221 107 6 chr17 28615463 28615631 -66657020 - B3 SINE B2 -7 209 25 3 803 754 198 10 76 chr17 28615624 28615821 -66656830 - B2_Mm2 SINE B2 -9 186 3 3 803 1447 94 0 0 chr17 28615884 28616076 -66656575 - B2_Mm2 SINE B2 -2 193 2 3 803 298 83 167 0 chr17 28616491 28616539 -66656112 + B2_Mm2 SINE B2 1 56 -139 3 803 26 30 0 0 chr17 28616543 28616576 -66656075 + AT_rich Low_complexity Low_complexity 1 33 0 3 803 1263 20 0 26 chr17 28617041 28617192 -66655459 + B1_Mus1 SINE Alu 2 148 0 3 803 570 239 0 97 chr17 28617211 28617387 -66655264 - RMER10B LTR ERVL -46 352 194 3 803 1360 83 39 0 chr17 28617761 28617942 -66654709 - B2_Mm2 SINE B2 -7 188 1 3 803 997 82 0 7 chr17 28618133 28618268 -66654383 + B1_Mus1 SINE Alu 15 148 0 3 803 424 223 8 67 chr17 28618419 28618539 -66654112 - PB1D9 SINE Alu -3 117 5 3 803 607 268 202 22 chr17 28618899 28619082 -66653569 + B3 SINE B2 1 216 0 3 803 233 207 190 0 chr17 28619106 28619164 -66653487 + ID4 SINE ID 2 70 -13 3 803 275 276 23 11 chr17 28619462 28619550 -66653101 + GA-rich Low_complexity Low_complexity 5 93 0 3 803 363 210 264 90 chr17 28619847 28620025 -66652626 + B3 SINE B2 2 210 -6 3 803 406 356 14 0 chr17 28620443 28620589 -66652062 + RSINE1 SINE B4 4 151 -14 3 803 911 76 52 15 chr17 28620763 28620897 -66651754 + B1_Mur4 SINE Alu 2 140 -10 3 803 216 0 0 0 chr17 28620897 28620921 -66651730 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 3 803 1043 46 62 0 chr17 28621164 28621294 -66651357 + B1_Mus2 SINE Alu 1 138 -9 3 803 297 0 0 0 chr17 28621294 28621327 -66651324 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 3 803 180 176 0 0 chr17 28621802 28621836 -66650815 + A-rich Low_complexity Low_complexity 1 34 0 3 803 621 156 94 22 chr17 28622265 28622403 -66650248 - RSINE1 SINE B4 -7 158 11 3 803 21 57 0 0 chr17 28622671 28622706 -66649945 + GC_rich Low_complexity Low_complexity 1 35 0 3 803 208 252 31 23 chr17 28622900 28623030 -66649621 + (CCGCG)n Simple_repeat Simple_repeat 4 134 0 3 803 21 71 0 0 chr17 28623062 28623104 -66649547 + GC_rich Low_complexity Low_complexity 1 42 0 3 803 429 201 230 79 chr17 28623751 28623777 -66648874 - B3 SINE B2 -11 205 167 3 803 432 0 0 0 chr17 28623777 28623825 -66648826 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 803 429 201 230 79 chr17 28623825 28623976 -66648675 - B3 SINE B2 -50 166 1 3 803 225 83 0 0 chr17 28623979 28624015 -66648636 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 803 1491 77 0 0 chr17 28624127 28624322 -66648329 - B2_Mm2 SINE B2 0 195 1 3 803 506 306 68 6 chr17 28625477 28625638 -66647013 + MER45A DNA Tip100 1 171 -7 3 803 243 0 0 0 chr17 28625777 28625804 -66646847 + (T)n Simple_repeat Simple_repeat 1 27 0 3 803 620 259 6 58 chr17 28625839 28626011 -66646640 + RSINE1 SINE B4 2 164 -1 3 803 269 109 0 21 chr17 28626332 28626379 -66646272 + (TCTCCC)n Simple_repeat Simple_repeat 6 51 0 3 803 325 309 58 45 chr17 28626599 28626755 -66645896 + L1MCa LINE L1 1829 1986 -4522 3 803 755 267 113 6 chr17 28626777 28626954 -66645697 - B3 SINE B2 -19 197 2 3 803 535 298 22 153 chr17 28626959 28627181 -66645470 - B3A SINE B2 -1 197 1 3 803 306 0 0 0 chr17 28627216 28627250 -66645401 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 803 581 191 68 34 chr17 28627250 28627387 -66645264 - RSINE1 SINE B4 -18 147 5 3 803 484 197 129 21 chr17 28627551 28627691 -66644960 - MER58A DNA MER1_type -23 201 47 3 803 1226 117 16 16 chr17 28627697 28627888 -66644763 + B2_Mm1t SINE B2 1 191 -2 3 803 296 216 87 19 chr17 28627891 28627995 -66644656 + L1MCa LINE L1 4175 4285 -2036 3 803 401 302 0 0 chr17 28628003 28628099 -66644552 - ID_B1 SINE B4 -1 223 128 3 803 292 286 20 0 chr17 28628127 28628225 -66644426 + L1MCa LINE L1 4276 4375 -1946 3 803 813 288 24 0 chr17 28628767 28628972 -66643679 + ID_B1 SINE B4 13 222 -2 3 803 216 0 0 0 chr17 28629203 28629227 -66643424 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 3 803 763 110 34 17 chr17 28629483 28629659 -66642992 + (CA)n Simple_repeat Simple_repeat 2 180 0 3 803 816 128 5 27 chr17 28629685 28629869 -66642782 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 803 322 169 17 17 chr17 28629873 28629933 -66642718 + HAL1-3A_ME LINE L1 1977 2036 -822 3 803 400 174 79 89 chr17 28630366 28630467 -66642184 - MTEa LTR MaLR -3 376 277 3 803 691 197 8 0 chr17 28630630 28630762 -66641889 + MER53 DNA hAT 34 166 -27 3 803 348 246 0 0 chr17 28630899 28630968 -66641683 - B3A SINE B2 -128 70 2 3 803 247 305 93 21 chr17 28631109 28631206 -66641445 + RMER15 LTR ERVL 389 492 -83 3 803 1278 156 54 0 chr17 28631467 28631672 -66640979 + B3 SINE B2 1 216 0 3 803 750 210 0 28 chr17 28631713 28631855 -66640796 + B1_Mur1 SINE Alu 2 139 -10 3 803 180 0 0 0 chr17 28631855 28631875 -66640776 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3 803 438 171 0 0 chr17 28632029 28632099 -66640552 - B3A SINE B2 -127 71 2 3 803 1045 109 14 0 chr17 28632113 28632251 -66640400 - B1_Mur4 SINE Alu -6 144 5 3 803 24 0 0 0 chr17 28632254 28632278 -66640373 + AT_rich Low_complexity Low_complexity 1 24 0 3 803 501 267 30 102 chr17 28632283 28632450 -66640201 - B3A SINE B2 -13 203 49 3 803 705 265 157 25 chr17 28632500 28632754 -66639897 + B4 SINE B4 2 291 -1 3 803 312 325 138 59 chr17 28632801 28633004 -66639647 + L1MC LINE L1 5374 5592 -2290 3 803 242 115 19 0 chr17 28633197 28633249 -66639402 + (CAGAGA)n Simple_repeat Simple_repeat 5 57 0 3 803 510 281 16 16 chr17 28633253 28633376 -66639275 - ID_B1 SINE B4 -12 212 90 3 803 755 221 115 5 chr17 28633423 28633441 -66639210 - B3 SINE B2 -4 212 195 3 803 315 49 0 0 chr17 28633441 28633482 -66639169 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 803 755 221 115 5 chr17 28633482 28633654 -66638997 - B3 SINE B2 -22 194 3 3 803 359 269 90 27 chr17 28633735 28633846 -66638805 + MLT1J LTR MaLR 63 180 -332 3 803 216 97 0 0 chr17 28633943 28633974 -66638677 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 3 803 244 291 113 28 chr17 28634138 28634244 -66638407 + MLT1J LTR MaLR 389 503 -9 3 803 1550 222 10 3 chr17 28634276 28634570 -66638081 + MTD LTR MaLR 114 409 -10 3 803 762 142 0 16 chr17 28634563 28634685 -66637966 + B1_Mur2 SINE Alu 19 138 -11 3 803 624 276 54 29 chr17 28634763 28634968 -66637683 - B3 SINE B2 -1 215 6 3 803 274 178 89 76 chr17 28635238 28635317 -66637334 + B1F SINE Alu 45 148 -1 3 803 217 170 0 19 chr17 28635475 28635529 -66637122 + (CAGA)n Simple_repeat Simple_repeat 3 55 0 3 803 274 320 11 169 chr17 28635577 28635761 -66636890 + RSINE1 SINE B4 11 165 0 3 803 214 210 30 0 chr17 28635762 28635870 -66636781 + (CA)n Simple_repeat Simple_repeat 1 111 0 3 803 203 276 19 0 chr17 28635893 28636004 -66636647 + (CA)n Simple_repeat Simple_repeat 1 113 0 3 803 215 103 26 0 chr17 28636027 28636066 -66636585 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 803 247 250 41 134 chr17 28636249 28636346 -66636305 + B3A SINE B2 1 88 -110 3 803 829 203 20 0 chr17 28636359 28636507 -66636144 - B3A SINE B2 -47 151 1 3 803 496 278 68 83 chr17 28636725 28636917 -66635734 - B3A SINE B2 -6 192 4 3 803 852 301 67 47 chr17 28636970 28637310 -66635341 + ORR1E LTR MaLR 1 421 0 3 803 700 228 24 0 chr17 28637323 28637450 -66635201 + RSINE1 SINE B4 3 132 -33 3 803 278 301 21 41 chr17 28637715 28637812 -66634839 - PB1 SINE Alu -29 98 4 3 803 595 228 0 163 chr17 28637944 28638122 -66634529 + B1_Mur1 SINE Alu 1 149 0 3 803 196 229 164 0 chr17 28638179 28638240 -66634411 - MIRm SINE MIR -136 140 70 3 803 1031 164 4 100 chr17 28638430 28638557 -66634094 + B3 SINE B2 2 128 -88 4 803 1337 75 43 0 chr17 28638557 28638744 -66633907 - B2_Mm2 SINE B2 0 195 1 4 803 1031 164 4 100 chr17 28638744 28638847 -66633804 + B3 SINE B2 129 210 -6 4 803 540 143 0 0 chr17 28638990 28639116 -66633535 + (TCCC)n Simple_repeat Simple_repeat 1 126 0 4 803 296 308 36 45 chr17 28639480 28639592 -66633059 - PB1D9 SINE Alu -1 119 9 4 803 282 263 82 21 chr17 28639684 28639715 -66632936 + PB1D10 SINE Alu 1 103 -14 4 803 283 288 0 0 chr17 28639715 28639781 -66632870 + ID_B1 SINE B4 145 210 -14 4 803 530 0 0 30 chr17 28639783 28639850 -66632801 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 4 803 916 159 14 0 chr17 28639921 28640066 -66632585 + B1_Mur4 SINE Alu 2 148 -2 4 803 276 304 5 0 chr17 28640406 28640611 -66632040 + (TG)n Simple_repeat Simple_repeat 1 206 0 4 803 422 274 74 88 chr17 28640611 28640907 -66631744 - B4A SINE B4 0 292 1 4 803 435 16 0 45 chr17 28640931 28640998 -66631653 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 4 803 228 224 20 0 chr17 28641406 28641455 -66631196 + ID_B1 SINE B4 105 154 -70 4 803 509 325 12 6 chr17 28641459 28641620 -66631031 + RSINE1 SINE B4 1 162 -3 4 803 22 0 0 0 chr17 28641954 28641976 -66630675 + AT_rich Low_complexity Low_complexity 1 22 0 4 803 264 326 67 15 chr17 28642062 28642073 -66630578 + B1F SINE Alu 8 72 -77 4 803 408 259 26 9 chr17 28642073 28642186 -66630465 + ID_B1 SINE B4 99 213 -11 4 803 713 284 43 16 chr17 28642248 28642434 -66630217 + B3 SINE B2 1 191 -25 4 803 222 341 0 16 chr17 28642891 28643016 -66629635 + (TG)n Simple_repeat Simple_repeat 2 124 0 4 803 189 0 0 0 chr17 28643268 28643289 -66629362 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 803 603 251 41 73 chr17 28643292 28643511 -66629140 - B4A SINE B4 -25 267 56 4 803 510 221 113 5 chr17 28643537 28643680 -66628971 - ID_B1 SINE B4 -12 212 57 4 803 180 280 20 0 chr17 28643956 28644006 -66628645 - MIR SINE MIR -139 69 19 4 803 554 233 71 9 chr17 28644733 28644890 -66627761 + ID_B1 SINE B4 3 172 -120 4 803 260 227 162 0 chr17 28644890 28644985 -66627666 + B1_Mm SINE Alu 2 112 -8 4 803 22 56 0 0 chr17 28645037 28645073 -66627578 + AT_rich Low_complexity Low_complexity 1 36 0 4 803 956 148 7 26 chr17 28645081 28645234 -66627417 + B1_Mur4 SINE Alu 1 150 0 4 803 297 0 0 0 chr17 28645246 28645279 -66627372 + (TAA)n Simple_repeat Simple_repeat 2 34 0 4 803 785 145 71 21 chr17 28645323 28645464 -66627187 - B1_Mur3 SINE Alu 0 149 2 4 803 412 290 119 40 chr17 28645473 28645649 -66627002 - B3A SINE B2 -7 191 2 4 803 372 306 39 58 chr17 28645657 28645813 -66626838 - B4A SINE B4 -1 291 139 4 803 253 289 13 26 chr17 28645837 28645915 -66626736 - B4 SINE B4 -215 77 1 4 803 345 48 0 0 chr17 28645923 28645965 -66626686 - HAL1-3A_ME LINE L1 -842 2016 1975 4 803 738 176 19 22 chr17 28645965 28646603 -66626048 + (TG)n Simple_repeat Simple_repeat 1 636 0 4 803 551 173 9 27 chr17 28646761 28646989 -66625662 + (TG)n Simple_repeat Simple_repeat 1 223 0 4 803 505 288 24 48 chr17 28647000 28647168 -66625483 - RSINE1 SINE B4 0 165 2 4 803 636 231 35 7 chr17 28647202 28647346 -66625305 + B1_Mur1 SINE Alu 2 149 0 4 803 219 195 0 78 chr17 28648298 28648426 -66624225 + G-rich Low_complexity Low_complexity 3 120 0 4 803 262 241 12 35 chr17 28648446 28648618 -66624033 + GA-rich Low_complexity Low_complexity 3 170 0 4 803 333 0 0 0 chr17 28648977 28649014 -66623637 + (A)n Simple_repeat Simple_repeat 1 37 0 4 803 654 245 7 21 chr17 28649049 28649191 -66623460 - B1_Mur2 SINE Alu -8 141 2 4 803 258 229 0 32 chr17 28649198 28649261 -66623390 + MIRc SINE MIR 88 148 -120 4 803 204 315 53 18 chr17 28649446 28649559 -66623092 + L2a LINE L2 3214 3330 -96 4 803 202 322 148 40 chr17 28649813 28650094 -66622557 + L2b LINE L2 2870 3180 -195 4 803 1352 166 9 13 chr17 28650201 28650427 -66622224 + URR1A DNA MER1_type 2 226 0 4 803 201 170 0 113 chr17 28650438 28650491 -66622160 + MIRb SINE MIR 218 270 -6 4 803 356 150 16 16 chr17 28650631 28650692 -66621959 + RSINE1 SINE B4 45 105 -60 4 803 324 0 0 0 chr17 28650728 28650764 -66621887 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 803 555 281 0 0 chr17 28651293 28651414 -66621237 + ID_B1 SINE B4 82 202 -22 4 803 530 207 45 8 chr17 28651557 28651671 -66620980 + PB1D10 SINE Alu 5 125 -2 4 803 21 0 0 0 chr17 28651952 28651973 -66620678 + GC_rich Low_complexity Low_complexity 1 21 0 4 803 301 158 21 41 chr17 28651973 28652118 -66620533 + (CAGAGA)n Simple_repeat Simple_repeat 5 146 0 4 803 479 196 0 6 chr17 28652135 28652304 -66620347 + GA-rich Low_complexity Low_complexity 2 169 0 4 803 191 180 51 109 chr17 28652911 28653005 -66619646 - MIRc SINE MIR -128 140 49 4 803 1311 77 66 0 chr17 28653619 28653802 -66618849 + B2_Mm2 SINE B2 1 195 0 4 803 723 202 5 57 chr17 28654054 28654232 -66618419 + B3A SINE B2 5 161 -34 4 803 270 0 0 0 chr17 28654232 28654262 -66618389 + (TC)n Simple_repeat Simple_repeat 1 30 0 4 803 240 59 0 0 chr17 28654262 28654295 -66618356 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 803 527 204 28 150 chr17 28654295 28654328 -66618323 + B2_Mm2 SINE B2 162 190 -5 4 803 237 65 0 0 chr17 28655146 28655177 -66617474 + (CGGG)n Simple_repeat Simple_repeat 4 34 0 4 803 216 0 0 0 chr17 28655702 28655726 -66616925 + (GGGA)n Simple_repeat Simple_repeat 2 25 0 4 803 318 293 13 0 chr17 28656555 28656630 -66616021 - ID4_ SINE ID -2 81 6 4 803 23 33 0 0 chr17 28656631 28656661 -66615990 + AT_rich Low_complexity Low_complexity 1 30 0 4 803 1233 47 0 26 chr17 28656677 28656829 -66615822 - B1_Mus1 SINE Alu 0 148 1 4 803 24 0 0 0 chr17 28656831 28656855 -66615796 + AT_rich Low_complexity Low_complexity 1 24 0 4 803 197 65 0 31 chr17 28657287 28657319 -66615332 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 803 1072 66 0 29 chr17 28657320 28657460 -66615191 - B1_Mus1 SINE Alu -12 136 1 4 803 205 152 0 0 chr17 28657461 28657494 -66615157 + T-rich Low_complexity Low_complexity 1 33 0 4 803 524 273 118 7 chr17 28657904 28658048 -66614603 - RSINE1 SINE B4 -3 162 3 4 803 729 257 26 48 chr17 28658238 28658467 -66614184 + ID_B1 SINE B4 1 224 0 4 803 303 49 0 0 chr17 28658525 28658566 -66614085 + (TCTCTG)n Simple_repeat Simple_repeat 3 43 0 4 803 234 0 0 0 chr17 28658566 28658591 -66614060 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 803 190 282 118 0 chr17 28658913 28658998 -66613653 + MIRc SINE MIR 50 144 -124 4 803 484 236 110 31 chr17 28659193 28659320 -66613331 + RSINE1 SINE B4 14 150 -15 4 803 432 222 116 36 chr17 28660622 28660734 -66611917 + RSINE1 SINE B4 30 150 -15 4 803 326 164 134 37 chr17 28660741 28660823 -66611828 + B1_Mur3 SINE Alu 1 90 -59 4 803 310 160 63 51 chr17 28660969 28661048 -66611603 - ID_B1 SINE B4 -33 191 112 4 803 390 275 143 23 chr17 28661508 28661683 -66610968 + ID_B1 SINE B4 2 197 -27 4 803 2752 89 63 0 chr17 28661704 28662087 -66610564 + MTB_Mm LTR MaLR 1 407 0 4 803 1291 61 89 6 chr17 28662128 28662308 -66610343 + B2_Mm2 SINE B2 1 195 0 4 803 624 221 92 58 chr17 28662346 28662519 -66610132 + B3 SINE B2 37 215 -1 4 803 1117 75 14 0 chr17 28662925 28663071 -66609580 - B1_Mus1 SINE Alu 0 148 1 4 803 288 266 94 68 chr17 28663128 28663245 -66609406 + B4 SINE B4 58 177 -115 4 803 1217 42 0 0 chr17 28663263 28663405 -66609246 - B1_Mus1 SINE Alu -6 142 1 4 803 1416 84 16 0 chr17 28663416 28663606 -66609045 - B2_Mm2 SINE B2 -1 194 2 4 803 1302 112 11 5 chr17 28663665 28663854 -66608797 + B2_Mm1t SINE B2 2 191 -2 4 803 441 195 116 25 chr17 28663899 28664020 -66608631 + MTD LTR MaLR 268 399 -20 4 803 572 133 296 17 chr17 28665282 28665397 -66607254 + B1_Mus1 SINE Alu 1 147 -1 4 803 333 258 211 8 chr17 28665410 28665534 -66607117 + B4A SINE B4 83 233 -59 4 803 377 240 225 33 chr17 28665534 28665685 -66606966 + B3A SINE B2 1 180 -18 4 803 644 266 99 0 chr17 28665728 28665920 -66606731 + B3 SINE B2 1 211 -5 4 803 300 91 0 0 chr17 28666048 28666092 -66606559 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 803 949 186 84 85 chr17 28666150 28666462 -66606189 + RMER21B LTR ERV1 272 611 -336 4 803 383 208 59 50 chr17 28666664 28666765 -66605886 + ID_B1 SINE B4 60 161 -63 4 803 1145 43 0 14 chr17 28666784 28666924 -66605727 - B1_Mus2 SINE Alu -9 138 1 4 803 545 311 32 21 chr17 28666992 28667179 -66605472 + B3 SINE B2 1 189 -27 4 803 476 167 41 58 chr17 28667179 28667300 -66605351 + PB1D9 SINE Alu 1 119 -1 4 803 1409 48 21 26 chr17 28667305 28667496 -66605155 + B2_Mm2 SINE B2 1 190 -5 4 803 682 233 0 58 chr17 28668381 28668409 -66604242 - B2_Mm2 SINE B2 -27 168 142 4 803 396 0 0 0 chr17 28668409 28668453 -66604198 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 803 801 191 14 1 chr17 28668453 28668597 -66604054 - B3 SINE B2 -67 149 6 4 803 231 88 0 0 chr17 28669067 28669101 -66603550 + (CGGGG)n Simple_repeat Simple_repeat 5 38 0 4 803 676 187 0 8 chr17 28669735 28669859 -66602792 - B1_Mus1 SINE Alu -25 123 1 4 803 1173 41 0 0 chr17 28669907 28670053 -66602598 + B1_Mus1 SINE Alu 2 147 -1 4 803 654 168 0 25 chr17 28670106 28670228 -66602423 + RSINE1 SINE B4 8 126 -39 5 803 180 0 0 0 chr17 28670295 28670315 -66602336 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 803 1178 53 9 169 chr17 28670755 28670857 -66601794 - B2_Mm2 SINE B2 -6 189 99 5 803 1221 20 0 7 chr17 28670857 28671005 -66601646 + B1_Mm SINE Alu 1 147 0 5 803 1178 53 9 169 chr17 28671005 28671127 -66601524 - B2_Mm2 SINE B2 -97 98 1 5 803 980 271 69 42 chr17 28671273 28671515 -66601136 + MTD LTR MaLR 6 266 -153 5 803 837 249 24 10 chr17 28671515 28671722 -66600929 - B3 SINE B2 -6 210 1 5 803 980 269 68 40 chr17 28671722 28671829 -66600822 + MTD LTR MaLR 267 387 -32 5 803 357 24 0 0 chr17 28671831 28671873 -66600778 + (TC)n Simple_repeat Simple_repeat 1 42 0 5 803 1135 75 0 0 chr17 28672001 28672148 -66600503 - B1_Mus1 SINE Alu 0 148 2 5 803 29 0 0 0 chr17 28672151 28672180 -66600471 + AT_rich Low_complexity Low_complexity 1 29 0 5 803 818 170 40 90 chr17 28672184 28672384 -66600267 + B2_Mm2 SINE B2 1 190 -5 5 803 999 128 7 0 chr17 28672497 28672645 -66600006 + B1_Mur4 SINE Alu 2 150 0 5 803 198 0 0 0 chr17 28672691 28672713 -66599938 + (T)n Simple_repeat Simple_repeat 1 22 0 5 803 1065 101 0 7 chr17 28672713 28672862 -66599789 - B1_Mus1 SINE Alu 0 148 1 5 803 744 294 64 14 chr17 28672862 28673195 -66599456 + L1MD2 LINE L1 5634 6000 -333 5 803 1197 61 61 0 chr17 28673476 28673641 -66599010 - B2_Mm2 SINE B2 -19 176 2 5 803 417 237 52 0 chr17 28673668 28673765 -66598886 - RSINE1 SINE B4 -20 145 44 5 803 384 22 0 0 chr17 28673813 28673858 -66598793 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 803 436 270 12 68 chr17 28673858 28674021 -66598630 - RSINE1 SINE B4 -10 155 2 5 803 210 171 0 0 chr17 28674067 28674108 -66598543 + GA-rich Low_complexity Low_complexity 1 41 0 5 803 215 0 0 62 chr17 28674693 28674725 -66597926 + (CCCCG)n Simple_repeat Simple_repeat 5 34 0 5 803 358 282 17 8 chr17 28674960 28675078 -66597573 - B3 SINE B2 -10 206 88 5 803 1159 48 0 0 chr17 28675181 28675327 -66597324 - B1_Mus2 SINE Alu 0 147 2 5 803 414 0 0 0 chr17 28676067 28676113 -66596538 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 803 294 333 124 48 chr17 28676162 28676411 -66596240 - B4A SINE B4 -17 275 8 5 803 1194 70 11 23 chr17 28676502 28676678 -66595973 - B2_Mm2 SINE B2 -21 174 1 5 803 605 174 28 0 chr17 28676694 28676803 -66595848 - B3 SINE B2 -103 113 2 5 803 1412 49 22 0 chr17 28676836 28677019 -66595632 + B2_Mm2 SINE B2 2 188 -7 5 803 258 224 72 29 chr17 28677218 28677287 -66595364 - MurSatRep1 Unknown Unknown -1837 300 229 5 803 451 194 86 0 chr17 28677315 28677408 -66595243 - RSINE1 SINE B4 -62 103 3 5 803 580 185 60 23 chr17 28677607 28677740 -66594911 + MIRb SINE MIR 25 162 -106 5 803 1964 99 3 85 chr17 28678076 28678418 -66594233 - RLTR10D LTR ERVK 0 359 46 5 803 372 132 0 0 chr17 28678419 28678464 -66594187 + (A)n Simple_repeat Simple_repeat 1 45 0 5 803 1194 34 0 13 chr17 28678464 28678613 -66594038 + B1_Mm SINE Alu 1 147 0 5 803 372 132 0 0 chr17 28678613 28678643 -66594008 + (A)n Simple_repeat Simple_repeat 1 30 0 5 803 414 85 0 0 chr17 28678643 28678702 -66593949 - RLTR10D LTR ERVK -300 59 1 5 803 3305 68 0 0 chr17 28678702 28679117 -66593534 - IAP-d-int LTR ERVK 0 6542 6128 5 803 7516 44 20 46 chr17 28679120 28680164 -66592487 - IAP-d-int LTR ERVK -521 6021 5005 5 803 1333 131 10 57 chr17 28680164 28680494 -66592157 - IAP-d-int LTR ERVK -6043 499 1 5 803 2400 92 3 75 chr17 28680494 28680881 -66591770 - RLTR10D LTR ERVK 0 359 1 5 803 651 228 33 7 chr17 28680915 28681065 -66591586 + RSINE1 SINE B4 2 155 -10 5 803 24 24 0 24 chr17 28681144 28681166 -66591485 + AT_rich Low_complexity Low_complexity 1 22 0 5 803 1062 101 0 0 chr17 28681166 28681314 -66591337 + B1_Mus1 SINE Alu 1 148 0 5 803 24 24 0 24 chr17 28681314 28681333 -66591318 + AT_rich Low_complexity Low_complexity 1 19 0 5 803 1201 77 0 12 chr17 28681335 28681505 -66591146 - B2_Mm2 SINE B2 -26 169 2 5 803 386 245 0 41 chr17 28681534 28681571 -66591080 + B3 SINE B2 2 37 -179 5 803 1027 36 0 62 chr17 28681571 28681717 -66590934 + B1_Mm SINE Alu 1 137 -10 5 803 258 32 0 0 chr17 28681717 28681748 -66590903 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 5 803 386 188 374 26 chr17 28681748 28681879 -66590772 + B3 SINE B2 38 214 -2 5 803 1101 71 0 0 chr17 28681883 28682024 -66590627 + B1_Mus2 SINE Alu 1 141 -6 5 803 336 48 0 0 chr17 28682026 28682068 -66590583 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 5 803 498 176 165 10 chr17 28682069 28682172 -66590479 + PB1D9 SINE Alu 2 120 0 5 803 246 62 0 0 chr17 28682373 28682405 -66590246 + (T)n Simple_repeat Simple_repeat 1 32 0 5 803 846 199 45 10 chr17 28682929 28683127 -66589524 + B3 SINE B2 2 206 -10 5 803 240 35 0 0 chr17 28683240 28683269 -66589382 + (GA)n Simple_repeat Simple_repeat 1 29 0 5 803 868 167 0 0 chr17 28684153 28684291 -66588360 + B1F SINE Alu 1 138 -11 5 803 234 0 0 0 chr17 28684293 28684319 -66588332 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 5 803 594 233 0 0 chr17 28684324 28684444 -66588207 + B1_Mur1 SINE Alu 18 137 -12 5 803 251 342 0 168 chr17 28684560 28684697 -66587954 + ID_B1 SINE B4 25 138 -86 5 803 292 88 35 0 chr17 28684703 28684760 -66587891 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 803 592 207 1 11 chr17 28684779 28684903 -66587748 - RSINE1 SINE B4 -38 127 3 5 803 1137 28 14 0 chr17 28684983 28685128 -66587523 + B1_Mus2 SINE Alu 1 147 0 5 803 465 66 0 0 chr17 28686906 28686967 -66585684 + (TCCC)n Simple_repeat Simple_repeat 2 62 0 5 803 368 268 7 106 chr17 28686973 28687115 -66585536 - RSINE1 SINE B4 -30 135 8 5 803 1150 124 21 0 chr17 28687213 28687399 -66585252 - B2_Mm1a SINE B2 -3 190 1 5 803 324 70 0 0 chr17 28687400 28687443 -66585208 + (TTTC)n Simple_repeat Simple_repeat 4 46 0 5 803 876 228 108 14 chr17 28688486 28688821 -66583830 - MTD LTR MaLR 0 419 25 5 803 1216 14 0 14 chr17 28688835 28688983 -66583668 + B1_Mm SINE Alu 2 147 0 5 803 225 0 0 0 chr17 28688983 28689008 -66583643 + (A)n Simple_repeat Simple_repeat 1 25 0 5 803 492 261 53 13 chr17 28689014 28689189 -66583462 + B3 SINE B2 5 195 -3 5 803 246 105 0 0 chr17 28689668 28689706 -66582945 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 5 803 397 279 32 45 chr17 28689866 28690020 -66582631 + RSINE1 SINE B4 8 159 -6 5 803 626 282 6 24 chr17 28690054 28690221 -66582430 + B3A SINE B2 1 164 -34 5 803 282 120 26 13 chr17 28690282 28690358 -66582293 + A-rich Low_complexity Low_complexity 2 78 0 5 803 529 227 56 132 chr17 28690765 28690978 -66581673 - B3A SINE B2 0 198 2 5 803 22 0 0 0 chr17 28690978 28691000 -66581651 + AT_rich Low_complexity Low_complexity 1 22 0 5 803 454 272 79 8 chr17 28691003 28691129 -66581522 - B3 SINE B2 -1 215 81 5 803 250 289 6 26 chr17 28691242 28691398 -66581253 + (GGCTG)n Simple_repeat Simple_repeat 3 155 0 5 803 382 236 62 8 chr17 28691461 28691589 -66581062 - ID_B1 SINE B4 -38 186 52 5 803 232 105 0 26 chr17 28691626 28691665 -66580986 + RLTR11A LTR ERVK 95 132 -396 5 803 264 53 18 18 chr17 28691657 28691714 -66580937 - B2_Mm2 SINE B2 0 195 139 5 803 1287 79 11 0 chr17 28691725 28691902 -66580749 - B2_Mm1t SINE B2 -14 179 1 5 803 2487 103 15 7 chr17 28691904 28692313 -66580338 + RLTR11A LTR ERVK 117 528 0 5 803 369 258 0 49 chr17 28692355 28692368 -66580283 + ID SINE ID 71 78 -146 5 803 524 246 26 0 chr17 28692368 28692482 -66580169 + PB1D7 SINE Alu 1 117 -3 5 803 23 0 0 0 chr17 28692888 28692911 -66579740 + GC_rich Low_complexity Low_complexity 1 23 0 5 803 259 229 0 0 chr17 28693078 28693126 -66579525 + PB1D10 SINE Alu 3 50 -67 5 803 245 162 38 150 chr17 28693118 28693198 -66579453 - PB1D10 SINE Alu -66 83 13 5 803 265 301 81 44 chr17 28693440 28693600 -66579051 - RMER15 LTR ERVL -5 570 405 5 803 1541 36 0 20 chr17 28696128 28696325 -66576326 - B2_Mm1a SINE B2 0 193 1 5 803 400 160 154 31 chr17 28696330 28696459 -66576192 - B1F SINE Alu -1 148 1 5 803 558 188 35 21 chr17 28696542 28696557 -66576094 - ID_B1 SINE B4 0 224 82 5 803 945 56 0 0 chr17 28696557 28696683 -66575968 - B1_Mus2 SINE Alu -21 126 1 5 803 599 219 32 0 chr17 28696685 28696808 -66575843 + B1_Mur4 SINE Alu 15 141 -9 5 803 516 116 447 16 chr17 28697082 28697205 -66575446 + B2_Mm2 SINE B2 1 176 -19 5 803 369 0 0 0 chr17 28697797 28697838 -66574813 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 803 254 269 0 71 chr17 28697913 28697997 -66574654 + ID2 SINE ID 5 82 -1 5 803 245 188 129 0 chr17 28698005 28698090 -66574561 + Lx5 LINE L1 6955 7050 0 5 803 405 146 178 11 chr17 28699475 28699565 -66573086 + B1_Mur3 SINE Alu 36 140 -9 5 803 207 0 0 0 chr17 28699565 28699588 -66573063 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 5 803 282 257 108 10 chr17 28699729 28699831 -66572820 + ID_B1 SINE B4 83 194 -30 5 803 191 154 45 15 chr17 28699831 28699897 -66572754 + CT-rich Low_complexity Low_complexity 2 69 0 5 803 650 94 0 0 chr17 28699900 28699996 -66572655 - B1_Mus2 SINE Alu -3 144 49 5 803 34 0 0 0 chr17 28700027 28700061 -66572590 + AT_rich Low_complexity Low_complexity 1 34 0 5 803 298 191 59 44 chr17 28700061 28700175 -66572476 + B1F SINE Alu 1 148 -1 5 803 469 32 0 0 chr17 28700189 28700252 -66572399 + B1_Mur4 SINE Alu 88 150 0 5 803 270 81 0 0 chr17 28700252 28700289 -66572362 + (A)n Simple_repeat Simple_repeat 1 37 0 5 803 315 241 25 0 chr17 28700406 28700485 -66572166 + 4.5SRNA scRNA scRNA 7 87 -7 5 803 297 284 69 0 chr17 28700407 28700509 -66572142 + PB1D10 SINE Alu 9 117 0 6 803 217 270 143 0 chr17 28700529 28700592 -66572059 + PB1D7 SINE Alu 44 115 -5 6 803 304 309 139 125 chr17 28700598 28700654 -66571997 + B4 SINE B4 1 41 -251 6 803 1125 68 0 20 chr17 28700654 28700804 -66571847 + B1_Mus2 SINE Alu 1 147 0 6 803 385 302 81 71 chr17 28700804 28701035 -66571616 + B4A SINE B4 42 292 0 6 803 349 66 33 0 chr17 28701274 28701335 -66571316 + (TTTTTG)n Simple_repeat Simple_repeat 3 65 0 6 803 1073 88 0 0 chr17 28701337 28701484 -66571167 - B1_Mus1 SINE Alu 0 148 2 6 803 3001 164 38 87 chr17 28701484 28701607 -66571044 - ETnERV2-int LTR ERVK -4275 3131 3022 6 803 1252 101 11 0 chr17 28701607 28701796 -66570855 + B2_Mm1a SINE B2 1 191 -2 6 803 3001 164 38 87 chr17 28701796 28702412 -66570239 - ETnERV2-int LTR ERVK -4385 3021 2428 6 803 4673 117 30 142 chr17 28702407 28702511 -66570140 - ETnERV2-int LTR ERVK -5319 2087 1998 6 803 1181 34 0 14 chr17 28702511 28702659 -66569992 + B1_Mus1 SINE Alu 3 148 0 6 803 4673 117 30 142 chr17 28702659 28702951 -66569700 - ETnERV2-int LTR ERVK -5409 1997 1730 6 803 1498 27 38 0 chr17 28702951 28703136 -66569515 - B2_Mm1t SINE B2 -1 192 1 6 803 309 26 0 0 chr17 28703143 28703181 -66569470 + (TTG)n Simple_repeat Simple_repeat 2 39 0 6 803 1199 34 0 7 chr17 28703181 28703329 -66569322 - B1_Mm SINE Alu 0 147 1 6 803 4673 117 30 142 chr17 28703329 28703450 -66569201 - ETnERV2-int LTR ERVK -5677 1729 1636 6 803 1291 86 27 0 chr17 28703450 28703636 -66569015 + B2_Mm1a SINE B2 3 193 0 6 803 4673 117 30 142 chr17 28703636 28703849 -66568802 - ETnERV2-int LTR ERVK -5771 1635 1431 6 803 320 0 25 0 chr17 28703849 28703889 -66568762 + (TTA)n Simple_repeat Simple_repeat 2 42 0 6 803 1147 41 7 0 chr17 28703894 28704040 -66568611 - B1_Mus2 SINE Alu 0 147 1 6 803 1545 47 0 0 chr17 28704047 28704239 -66568412 - B2_Mm1a SINE B2 0 193 2 6 803 4673 117 30 142 chr17 28704239 28704608 -66568043 - ETnERV2-int LTR ERVK -5976 1430 1089 6 100 1030 126 49 11 chr17 28704608 28704820 -66567831 - RLTR9A2 LTR ERVK -150 218 1 6 804 645 249 138 13 chr17 28704856 28705080 -66567571 + Lx8 LINE L1 6745 6996 -477 6 804 1052 146 15 30 chr17 28705328 28705526 -66567125 + RLTR24 LTR ERV1 1 195 -334 6 804 885 94 0 0 chr17 28705529 28705656 -66566995 + B1_Mus1 SINE Alu 1 127 -21 6 804 1315 185 151 9 chr17 28705690 28706007 -66566644 + RLTR24 LTR ERV1 167 528 -1 6 804 1233 102 37 11 chr17 28706071 28706084 -66566567 - B2_Mm2 SINE B2 -1 194 182 6 804 1409 73 16 0 chr17 28706084 28706275 -66566376 - B2_Mm2 SINE B2 0 195 2 6 804 261 0 0 0 chr17 28706275 28706304 -66566347 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 6 804 1233 102 37 11 chr17 28706304 28706478 -66566173 - B2_Mm2 SINE B2 -14 181 2 6 804 1198 123 16 0 chr17 28706751 28706938 -66565713 - B2_Mm2 SINE B2 -5 190 1 6 804 425 202 43 0 chr17 28706955 28707049 -66565602 - B1F1 SINE Alu -51 98 1 6 804 1916 176 36 23 chr17 28707132 28707517 -66565134 + MTC LTR MaLR 29 418 -3 6 804 250 339 84 6 chr17 28707531 28707697 -66564954 - L1MD LINE L1 -559 5683 5505 6 804 946 221 14 40 chr17 28707733 28707955 -66564696 + B3 SINE B2 1 216 0 6 804 26 0 0 0 chr17 28707955 28707981 -66564670 + AT_rich Low_complexity Low_complexity 1 26 0 6 804 7270 70 19 21 chr17 28707993 28709018 -66563633 - RLTR13D5 LTR ERVK 0 1023 1 6 804 274 327 57 9 chr17 28709098 28709203 -66563448 + ID_B1 SINE B4 114 223 -1 6 804 1157 97 17 11 chr17 28709259 28709436 -66563215 - B2_Mm1t SINE B2 -14 179 2 6 804 216 0 0 0 chr17 28709437 28709461 -66563190 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 6 804 647 166 307 18 chr17 28710031 28710197 -66562454 + B3 SINE B2 2 215 -1 6 804 1151 108 11 26 chr17 28710210 28710401 -66562250 - B2_Mm2 SINE B2 -7 188 1 6 804 1079 102 67 17 chr17 28710410 28710589 -66562062 - B2_Mm2 SINE B2 -6 189 2 6 804 2122 86 16 7 chr17 28710752 28711056 -66561595 + RLTR27 LTR ERVK 3 309 0 6 804 348 326 0 0 chr17 28711225 28711311 -66561340 - PB1D7 SINE Alu -30 90 5 6 804 264 327 0 82 chr17 28711311 28711335 -66561316 - ID_B1 SINE B4 -56 168 68 6 804 234 0 0 0 chr17 28711339 28711365 -66561286 + (TTG)n Simple_repeat Simple_repeat 2 27 0 6 804 1024 90 14 0 chr17 28711365 28711505 -66561146 - B1_Mus1 SINE Alu 0 148 7 6 804 610 204 0 26 chr17 28711610 28711726 -66560925 - B1_Mur3 SINE Alu -31 118 6 6 804 432 296 42 113 chr17 28711612 28711825 -66560826 - B4A SINE B4 -86 206 9 6 804 221 254 65 48 chr17 28712015 28712077 -66560574 - ID_B1 SINE B4 -78 146 84 6 804 341 211 0 13 chr17 28713538 28713615 -66559036 + PB1D7 SINE Alu 40 115 -5 6 804 472 247 34 107 chr17 28713643 28713820 -66558831 + RSINE1 SINE B4 2 165 0 6 804 580 309 55 40 chr17 28715373 28715646 -66557005 - MLT1A0 LTR MaLR 0 365 89 6 804 2066 85 3 114 chr17 28715646 28716005 -66556646 - ORR1A3 LTR MaLR 0 326 8 6 804 315 265 24 12 chr17 28716016 28716100 -66556551 - MLT1A0 LTR MaLR -280 94 10 6 804 297 0 0 0 chr17 28716766 28716799 -66555852 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 804 1050 122 50 0 chr17 28718077 28718257 -66554394 + B2_Mm1t SINE B2 1 189 -4 6 804 1115 81 0 0 chr17 28718946 28719094 -66553557 - B1_Mus1 SINE Alu 0 148 1 6 804 675 220 73 24 chr17 28719094 28719298 -66553353 - B3 SINE B2 -1 215 1 6 804 434 233 19 28 chr17 28719688 28719794 -66552857 + PB1D9 SINE Alu 10 114 -6 6 804 186 43 0 0 chr17 28719798 28719821 -66552830 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 804 508 236 9 9 chr17 28720346 28720457 -66552194 - PB1D9 SINE Alu -8 112 2 6 804 254 291 7 133 chr17 28720457 28720511 -66552140 - MT2B LTR ERVL -445 156 120 6 804 213 286 0 0 chr17 28720664 28720713 -66551938 + (ATGGTG)n Simple_repeat Simple_repeat 2 50 0 6 804 336 182 0 33 chr17 28720907 28720998 -66551653 + GA-rich Low_complexity Low_complexity 1 88 0 6 804 252 0 0 0 chr17 28721094 28721122 -66551529 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 6 804 1242 20 0 0 chr17 28721137 28721284 -66551367 - B1_Mm SINE Alu 0 147 1 6 804 21 0 0 0 chr17 28721290 28721311 -66551340 + AT_rich Low_complexity Low_complexity 1 21 0 6 804 748 116 18 0 chr17 28721311 28721423 -66551228 - PB1D9 SINE Alu -5 115 2 6 804 476 290 71 77 chr17 28722760 28722928 -66549723 + ID_B1 SINE B4 51 217 -7 6 804 1167 120 57 0 chr17 28722950 28723125 -66549526 + B2_Mm2 SINE B2 3 187 -8 6 804 422 156 344 0 chr17 28723155 28723245 -66549406 + B1_Mur2 SINE Alu 20 140 -9 6 804 205 51 0 49 chr17 28723289 28723330 -66549321 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 804 1213 50 0 0 chr17 28723330 28723469 -66549182 - B1_Mus2 SINE Alu -8 139 1 6 804 222 323 0 16 chr17 28723641 28723704 -66548947 + ID4 SINE ID 3 64 -19 6 804 189 0 0 0 chr17 28723863 28723884 -66548767 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 804 406 315 76 7 chr17 28724066 28724210 -66548441 - B4A SINE B4 -68 224 71 6 804 813 94 26 0 chr17 28724324 28724441 -66548210 + PB1D9 SINE Alu 1 120 0 6 804 217 259 0 0 chr17 28724442 28724496 -66548155 + A-rich Low_complexity Low_complexity 1 54 0 6 804 1261 54 0 0 chr17 28726145 28726292 -66546359 + B1_Mus2 SINE Alu 1 147 0 6 804 519 92 0 0 chr17 28726293 28726380 -66546271 + (A)n Simple_repeat Simple_repeat 1 87 0 6 804 1136 59 0 0 chr17 28729548 28729684 -66542967 + B1_Mus2 SINE Alu 1 136 -11 6 804 300 307 137 10 chr17 28729903 28730005 -66542646 - RSINE1 SINE B4 -47 118 4 6 804 284 204 0 0 chr17 28730264 28730313 -66542338 - B1F SINE Alu -54 95 47 6 804 1226 55 0 0 chr17 28731437 28731582 -66541069 + B1_Mm SINE Alu 1 145 -2 6 804 534 31 0 0 chr17 28731582 28731646 -66541005 + (GAAAA)n Simple_repeat Simple_repeat 2 65 0 6 804 639 180 69 35 chr17 28731653 28731797 -66540854 + B1_Mur1 SINE Alu 1 149 0 6 804 278 123 18 0 chr17 28731893 28731950 -66540701 + (GA)n Simple_repeat Simple_repeat 2 59 0 6 804 290 234 45 30 chr17 28731963 28732029 -66540622 + RSINE1 SINE B4 96 162 -3 6 804 225 288 68 0 chr17 28732261 28732334 -66540317 + RSINE1 SINE B4 57 134 -31 6 804 22 0 0 0 chr17 28732389 28732411 -66540240 + AT_rich Low_complexity Low_complexity 1 22 0 6 804 1556 63 0 25 chr17 28732418 28732614 -66540037 - B2_Mm1t SINE B2 -2 191 1 6 804 287 306 56 8 chr17 28732614 28732739 -66539912 - L1_Mur3 LINE L1 -3084 2796 2666 6 804 654 167 9 0 chr17 28732944 28733052 -66539599 - B2_Mm2 SINE B2 -86 109 1 6 804 243 273 62 18 chr17 28733066 28733178 -66539473 - L1_Mur3 LINE L1 -3551 2326 2210 6 804 289 230 40 121 chr17 28733247 28733346 -66539305 + MT2B LTR ERVL 150 240 -361 6 804 766 201 15 0 chr17 28733270 28733404 -66539247 + B1_Mur2 SINE Alu 8 143 -6 6 804 492 221 193 0 chr17 28733436 28733576 -66539075 + B3A SINE B2 8 174 -24 6 804 590 316 39 6 chr17 28733581 28733759 -66538892 - B3A SINE B2 -9 189 6 6 804 450 197 0 0 chr17 28733816 28733892 -66538759 - B1_Mus1 SINE Alu -72 76 1 6 804 309 217 87 0 chr17 28733831 28733900 -66538751 - ID_B1 SINE B4 -83 141 67 6 804 267 244 0 137 chr17 28733892 28733911 -66538740 - MT2B LTR ERVL -369 232 151 6 804 294 228 271 16 chr17 28734522 28734651 -66538000 + B4A SINE B4 46 207 -85 6 804 313 323 71 16 chr17 28734698 28734824 -66537827 + B1F1 SINE Alu 2 134 -15 6 804 949 113 7 7 chr17 28734834 28734976 -66537675 + B1_Mm SINE Alu 6 147 0 6 804 490 161 24 17 chr17 28735006 28735093 -66537558 + B1_Mus1 SINE Alu 2 88 -29 6 804 234 0 0 0 chr17 28735093 28735119 -66537532 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 804 393 209 24 120 chr17 28735119 28735160 -66537491 + PB1D10 SINE Alu 89 117 0 6 804 246 32 0 0 chr17 28735293 28735324 -66537327 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 804 1223 15 0 0 chr17 28735324 28735460 -66537191 - B1_Mus1 SINE Alu -8 140 5 7 804 210 297 39 51 chr17 28736205 28736283 -66536368 + ID4_ SINE ID 7 83 0 7 804 210 139 0 0 chr17 28737350 28737386 -66535265 + (TTC)n Simple_repeat Simple_repeat 2 37 0 7 804 505 52 39 0 chr17 28738053 28738130 -66534521 + L1Md_F2 LINE L1 6502 6581 -1 7 804 1172 37 0 0 chr17 28738142 28738276 -66534375 + B1_Mus1 SINE Alu 5 138 -10 7 804 324 211 189 0 chr17 28738312 28738402 -66534249 - PB1D9 SINE Alu -13 107 1 7 804 264 277 72 65 chr17 28738515 28738654 -66533997 - RSINE1 SINE B4 -21 144 5 7 804 281 349 0 36 chr17 28739115 28739225 -66533426 + PB1D10 SINE Alu 12 117 0 7 804 560 246 72 36 chr17 28739893 28740087 -66532564 + B3 SINE B2 11 211 -5 7 804 409 232 80 17 chr17 28740220 28740333 -66532318 + B1_Mur2 SINE Alu 1 114 -3 7 804 216 0 0 0 chr17 28740506 28740530 -66532121 + (A)n Simple_repeat Simple_repeat 1 24 0 7 804 1416 78 0 54 chr17 28740607 28740767 -66531884 + B2_Mm1t SINE B2 1 160 -33 7 804 243 0 0 0 chr17 28740767 28740794 -66531857 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 7 804 1416 78 0 54 chr17 28740794 28740837 -66531814 + B2_Mm1t SINE B2 161 193 0 7 804 1178 57 0 0 chr17 28741584 28741725 -66530926 - B1_Mus1 SINE Alu -5 143 3 7 804 1093 68 7 7 chr17 28742053 28742200 -66530451 + B1_Mus2 SINE Alu 1 147 0 7 804 290 296 59 47 chr17 28742467 28742503 -66530148 - CYRA11_Mm Unknown Y-chromosome -278 339 172 7 804 639 205 15 23 chr17 28742503 28742633 -66530018 + URR1B DNA MER1_type 97 225 0 7 804 544 89 9 56 chr17 28742667 28742774 -66529877 - Lx LINE L1 -1 6653 6552 7 804 687 199 29 37 chr17 28742786 28742922 -66529729 - B1_Mur1 SINE Alu -13 136 2 7 804 333 68 0 0 chr17 28743888 28743932 -66528719 + (GAAA)n Simple_repeat Simple_repeat 3 46 0 7 804 1554 53 21 0 chr17 28744497 28744684 -66527967 + B2_Mm1a SINE B2 2 192 -1 7 804 205 205 0 0 chr17 28744762 28744801 -66527850 + A-rich Low_complexity Low_complexity 1 39 0 7 804 630 232 0 7 chr17 28745258 28745381 -66527270 - B1_Mur4 SINE Alu -23 126 11 7 804 24 0 0 0 chr17 28745921 28745945 -66526706 + AT_rich Low_complexity Low_complexity 1 24 0 7 804 207 0 0 0 chr17 28746544 28746567 -66526084 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 7 804 1072 48 97 0 chr17 28746567 28746712 -66525939 - B2_Mm1a SINE B2 -33 160 2 7 804 254 207 0 79 chr17 28746859 28746922 -66525729 - PB1D10 SINE Alu -38 79 22 7 804 1181 43 0 0 chr17 28747047 28747185 -66525466 + B1_Mus2 SINE Alu 1 138 -9 7 804 297 0 0 0 chr17 28747185 28747218 -66525433 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 7 804 462 114 0 0 chr17 28747412 28747482 -66525169 + (TCCA)n Simple_repeat Simple_repeat 3 72 0 7 804 330 26 0 0 chr17 28747514 28747553 -66525098 + (CCTA)n Simple_repeat Simple_repeat 1 39 0 7 804 496 217 146 122 chr17 28747553 28747605 -66525046 - B3 SINE B2 -11 205 166 7 804 312 27 0 0 chr17 28747605 28747642 -66525009 + (CCTA)n Simple_repeat Simple_repeat 1 37 0 7 804 566 143 177 47 chr17 28747642 28747788 -66524863 - B2_Mm2 SINE B2 -51 165 1 7 804 760 88 35 9 chr17 28747944 28748059 -66524592 - PB1D9 SINE Alu 0 120 3 7 804 1718 26 0 0 chr17 28748091 28748284 -66524367 - B2_Mm1a SINE B2 0 193 1 7 804 1509 222 182 32 chr17 28748357 28749016 -66523635 + Lx9 LINE L1 6857 7619 -25 7 804 1378 95 16 0 chr17 28749016 28749205 -66523446 - B2_Mm2 SINE B2 -2 193 2 7 804 1509 222 182 32 chr17 28749205 28749230 -66523421 + Lx9 LINE L1 7620 7644 0 7 804 1217 68 0 0 chr17 28749236 28749383 -66523268 + B1_Mus2 SINE Alu 1 147 0 7 804 198 0 0 0 chr17 28749383 28749405 -66523246 + (A)n Simple_repeat Simple_repeat 1 22 0 7 804 939 95 73 0 chr17 28750091 28750228 -66522423 + B1_Mus1 SINE Alu 2 148 0 7 804 278 291 11 34 chr17 28750716 28750805 -66521846 - RSINE1 SINE B4 -76 89 3 7 804 2043 89 124 0 chr17 28750886 28751177 -66521474 + ORR1A2 LTR MaLR 1 327 0 7 804 1386 89 5 16 chr17 28751187 28751381 -66521270 + B2_Mm1a SINE B2 2 193 0 7 804 280 276 48 5 chr17 28751781 28751868 -66520783 - B1F2 SINE Alu -27 120 36 7 804 1267 41 0 0 chr17 28752004 28752151 -66520500 + B1_Mm SINE Alu 1 147 0 7 804 1282 27 0 0 chr17 28752195 28752342 -66520309 + B1_Mus2 SINE Alu 1 147 0 7 804 279 79 0 0 chr17 28752342 28752380 -66520271 + (A)n Simple_repeat Simple_repeat 1 38 0 7 804 460 278 53 6 chr17 28752545 28752663 -66519988 + ID_B1 SINE B4 5 126 -166 7 804 1735 127 176 18 chr17 28752770 28753106 -66519545 + ORR1B1 LTR MaLR 6 394 0 7 804 193 260 20 0 chr17 28753199 28753249 -66519402 - L2a LINE L2 -38 3388 3338 7 804 1096 153 64 35 chr17 28753635 28753838 -66518813 + B3 SINE B2 1 209 -7 7 804 206 234 0 0 chr17 28754293 28754340 -66518311 + GA-rich Low_complexity Low_complexity 2 48 0 7 804 252 0 0 0 chr17 28754348 28754376 -66518275 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 7 804 454 257 63 21 chr17 28754529 28754546 -66518105 + ID_B1 SINE B4 76 224 0 7 804 749 120 103 8 chr17 28754546 28754672 -66517979 + B1_Mur3 SINE Alu 12 149 0 7 804 478 191 119 60 chr17 28755443 28755577 -66517074 + B1_Mm SINE Alu 5 146 -1 7 804 1006 103 13 40 chr17 28756131 28756197 -66516454 - B1_Mus1 SINE Alu 0 148 86 7 804 3262 51 8 0 chr17 28756197 28756590 -66516061 - MTA_Mm LTR MaLR 0 396 1 7 804 1006 103 13 40 chr17 28756590 28756675 -66515976 - B1_Mus1 SINE Alu -63 85 1 7 804 516 294 7 29 chr17 28756890 28757030 -66515621 + RSINE1 SINE B4 4 140 -25 7 804 484 225 3 12 chr17 28757183 28757295 -66515356 + B1F1 SINE Alu 1 112 -8 7 804 529 184 174 0 chr17 28757302 28757411 -66515240 + B1_Mur3 SINE Alu 1 128 -21 7 804 530 175 172 16 chr17 28758017 28758145 -66514506 + B1F2 SINE Alu 1 148 -1 7 804 29 28 0 0 chr17 28759442 28759478 -66513173 + GC_rich Low_complexity Low_complexity 1 36 0 7 804 524 192 67 0 chr17 28759858 28759962 -66512689 + PB1D9 SINE Alu 5 115 -5 7 804 411 167 0 0 chr17 28759970 28760048 -66512603 + L1_Mus2 LINE L1 6489 6566 0 7 804 231 192 0 19 chr17 28760053 28760080 -66512571 + A-rich Low_complexity Low_complexity 2 27 0 7 804 1256 54 0 0 chr17 28760080 28760228 -66512423 + B1_Mus1 SINE Alu 1 148 0 7 804 231 192 0 19 chr17 28760228 28760253 -66512398 + A-rich Low_complexity Low_complexity 28 52 0 7 804 264 313 270 0 chr17 28760255 28760370 -66512281 + RSINE1 SINE B4 3 148 -17 7 804 217 238 170 62 chr17 28760502 28760614 -66512037 - MIRb SINE MIR -6 262 139 7 804 197 33 0 32 chr17 28760920 28760951 -66511700 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 7 804 1110 67 0 0 chr17 28760951 28761086 -66511565 - B1_Mus1 SINE Alu -13 135 1 7 804 1435 72 0 54 chr17 28761180 28761384 -66511267 + B2_Mm1a SINE B2 1 193 0 7 804 489 256 236 29 chr17 28761406 28761647 -66511004 + B4A SINE B4 2 292 0 7 804 202 262 0 0 chr17 28762368 28762410 -66510241 + (CG)n Simple_repeat Simple_repeat 1 42 0 7 804 318 50 0 0 chr17 28762410 28762450 -66510201 + (CA)n Simple_repeat Simple_repeat 1 40 0 7 804 546 201 71 1 chr17 28762867 28763003 -66509648 + B3A SINE B2 1 149 -67 7 804 630 98 0 0 chr17 28763164 28763246 -66509405 + B2_Mm2 SINE B2 1 82 -113 7 804 320 348 0 17 chr17 28763246 28763284 -66509367 + RSINE1 SINE B4 2 119 -46 7 804 324 0 0 0 chr17 28763287 28763323 -66509328 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 804 964 142 13 13 chr17 28763467 28763617 -66509034 - B1_Mur4 SINE Alu 0 150 1 7 804 697 212 147 5 chr17 28763738 28763928 -66508723 + ID_B1 SINE B4 1 217 -7 7 804 288 0 0 0 chr17 28763935 28763967 -66508684 + (TC)n Simple_repeat Simple_repeat 2 33 0 7 804 227 253 52 26 chr17 28763994 28764071 -66508580 + RLTR13B3 LTR ERVK 162 240 -689 7 804 474 176 0 162 chr17 28764260 28764396 -66508255 - PB1D10 SINE Alu -3 114 1 7 804 384 225 78 35 chr17 28764411 28764526 -66508125 - PB1D9 SINE Alu 0 120 1 7 804 294 319 94 12 chr17 28764571 28764742 -66507909 - L3 LINE CR1 -2256 2233 2049 7 804 362 341 57 29 chr17 28764744 28764919 -66507732 - LTR33 LTR ERVL -43 472 293 7 804 678 245 69 0 chr17 28765169 28765328 -66507323 + ID_B1 SINE B4 39 208 -16 7 804 359 263 152 0 chr17 28766444 28766543 -66506108 + RSINE1 SINE B4 19 132 -33 7 804 22 0 0 0 chr17 28766561 28766583 -66506068 + AT_rich Low_complexity Low_complexity 1 22 0 7 804 1285 21 7 0 chr17 28766670 28766815 -66505836 - B1_Mm SINE Alu 0 147 2 7 804 203 0 37 0 chr17 28766817 28766844 -66505807 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 7 804 760 170 0 94 chr17 28767064 28767213 -66505438 - B1_Mur3 SINE Alu -2 147 13 7 804 612 96 12 23 chr17 28767360 28767463 -66505188 - B1_Mm SINE Alu 0 149 42 7 804 762 131 14 71 chr17 28767544 28767684 -66504967 + B1_Mus1 SINE Alu 11 142 -6 7 804 228 35 0 0 chr17 28767765 28767794 -66504857 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 7 804 1238 61 0 0 chr17 28767798 28767945 -66504706 - B1_Mus1 SINE Alu 0 148 2 7 804 315 0 0 0 chr17 28767964 28767999 -66504652 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 804 617 275 0 0 chr17 28767999 28768119 -66504532 - RSINE1 SINE B4 -44 121 2 7 804 429 290 95 17 chr17 28768129 28768308 -66504343 - Charlie2b DNA MER1_type -814 1968 1776 8 804 404 195 12 61 chr17 28768467 28768549 -66504102 + B4 SINE B4 3 80 -212 8 804 730 148 194 0 chr17 28768568 28768607 -66504044 + B2_Mm1t SINE B2 4 44 -149 8 804 1562 48 11 5 chr17 28768607 28768797 -66503854 + B2_Mm1t SINE B2 2 192 -1 8 804 730 148 194 0 chr17 28768797 28768912 -66503739 + B2_Mm1t SINE B2 45 187 -6 8 804 949 202 40 0 chr17 28768913 28769086 -66503565 + B3 SINE B2 37 216 0 8 804 407 176 0 11 chr17 28769093 28769185 -66503466 + GA-rich Low_complexity Low_complexity 1 91 0 8 804 1252 82 25 90 chr17 28769190 28769390 -66503261 + B2_Mm2 SINE B2 8 194 -1 8 804 733 247 19 12 chr17 28769404 28769564 -66503087 + B4 SINE B4 81 241 -51 8 804 246 62 0 0 chr17 28770803 28770835 -66501816 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 804 707 268 34 69 chr17 28770849 28771053 -66501598 - B4 SINE B4 -60 232 36 8 804 614 271 56 30 chr17 28771132 28771330 -66501321 - B4 SINE B4 -2 290 88 8 804 226 343 14 0 chr17 28771357 28771427 -66501224 + L2a LINE L2 3331 3401 -25 8 804 1865 135 113 15 chr17 28771685 28772041 -66500610 + ORR1B1 LTR MaLR 28 394 0 8 804 1168 158 18 44 chr17 28772080 28772305 -66500346 - URR1A DNA MER1_type -3 223 5 8 804 1109 90 13 0 chr17 28772369 28772524 -66500127 + B2_Mm1t SINE B2 2 158 -35 8 804 1186 70 0 0 chr17 28772524 28772667 -66499984 + B1_Mm SINE Alu 1 143 -4 8 804 234 0 0 0 chr17 28772667 28772693 -66499958 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 8 804 248 143 267 67 chr17 28772972 28773016 -66499635 - MT2A LTR ERVL 0 533 467 8 804 483 18 0 0 chr17 28773016 28773072 -66499579 + (CA)n Simple_repeat Simple_repeat 1 56 0 8 804 248 143 267 67 chr17 28773072 28773132 -66499519 - MT2A LTR ERVL -67 466 409 8 804 247 228 257 38 chr17 28773325 28773430 -66499221 - MTEa LTR MaLR -246 133 6 8 804 617 254 52 62 chr17 28773716 28773926 -66498725 - B4A SINE B4 -83 209 2 8 804 755 226 16 63 chr17 28774180 28774369 -66498282 - B3A SINE B2 -16 182 3 8 804 378 161 0 0 chr17 28775255 28775348 -66497303 + (TCTCTG)n Simple_repeat Simple_repeat 4 96 0 8 804 1168 82 0 0 chr17 28775683 28775829 -66496822 + B1_Mus2 SINE Alu 2 147 0 8 804 387 193 33 98 chr17 28777362 28777454 -66495197 - RSINE1 SINE B4 -4 161 76 8 804 1254 42 0 0 chr17 28777454 28777596 -66495055 + B1_Mus1 SINE Alu 1 142 -6 8 804 846 116 0 0 chr17 28777598 28777727 -66494924 + (GAAA)n Simple_repeat Simple_repeat 3 131 0 8 804 228 135 0 0 chr17 28778193 28778230 -66494421 + (TCC)n Simple_repeat Simple_repeat 3 39 0 8 804 1122 69 21 0 chr17 28778230 28778374 -66494277 - B1_Mus2 SINE Alu 0 147 1 8 804 1185 55 0 14 chr17 28778616 28778764 -66493887 - B1_Mus1 SINE Alu 0 148 3 8 804 509 200 172 167 chr17 28779877 28780057 -66492594 - B3 SINE B2 -13 182 2 8 804 528 194 9 44 chr17 28780588 28780701 -66491950 + B1_Mur1 SINE Alu 1 109 -40 8 804 288 0 0 0 chr17 28782195 28782227 -66490424 + (TATG)n Simple_repeat Simple_repeat 4 35 0 8 804 300 338 29 36 chr17 28782462 28782529 -66490122 - L1MCa LINE L1 -4482 2026 1959 8 804 990 229 11 0 chr17 28782529 28782708 -66489943 + B3A SINE B2 2 182 -16 8 804 300 338 29 36 chr17 28782708 28782778 -66489873 - L1MCa LINE L1 -4550 1958 1890 8 804 23 0 0 0 chr17 28782856 28782879 -66489772 + AT_rich Low_complexity Low_complexity 1 23 0 8 804 1081 95 7 0 chr17 28782922 28783069 -66489582 - B1_Mus1 SINE Alu 0 148 1 8 804 288 302 46 11 chr17 28783228 28783315 -66489336 + PB1D7 SINE Alu 25 114 -6 8 804 337 243 16 123 chr17 28783386 28783508 -66489143 + MT2B LTR ERVL 155 263 -338 8 804 744 189 24 0 chr17 28783410 28783537 -66489114 + B1_Mur1 SINE Alu 12 141 -8 8 804 329 261 9 0 chr17 28783537 28783652 -66488999 + (TA)n Simple_repeat Simple_repeat 1 116 0 8 804 1190 41 0 52 chr17 28783774 28783929 -66488722 + B1_Mus2 SINE Alu 1 147 0 8 804 292 238 66 77 chr17 28784161 28784187 -66488464 + MT2B LTR ERVL 132 221 -380 8 804 456 209 51 215 chr17 28784187 28784252 -66488399 + B1_Mur2 SINE Alu 1 64 -85 8 804 493 136 0 11 chr17 28784252 28784341 -66488310 + L1_Mus2 LINE L1 6479 6566 0 8 804 456 209 51 215 chr17 28784341 28784355 -66488296 + B1_Mur2 SINE Alu 65 65 -84 8 804 1226 55 0 7 chr17 28784355 28784503 -66488148 + B1_Mm SINE Alu 1 147 0 8 804 456 209 51 215 chr17 28784503 28784599 -66488052 + B1_Mur2 SINE Alu 65 148 -1 8 804 874 171 6 6 chr17 28784609 28784786 -66487865 + GA-rich Low_complexity Low_complexity 2 178 0 8 804 917 103 21 42 chr17 28785247 28785389 -66487262 - B1_Mur2 SINE Alu 0 149 11 8 804 425 224 47 95 chr17 28785290 28785438 -66487213 - MT2B LTR ERVL -337 264 124 8 804 204 40 0 0 chr17 28785516 28785541 -66487110 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 8 804 312 284 36 73 chr17 28785556 28785693 -66486958 - B1_Mur1 SINE Alu -16 133 2 8 804 234 75 18 54 chr17 28785878 28785934 -66486717 + (TATG)n Simple_repeat Simple_repeat 4 57 0 8 804 448 307 171 8 chr17 28785971 28786211 -66486440 - B4A SINE B4 -13 279 1 8 804 23 0 0 0 chr17 28786599 28786622 -66486029 + AT_rich Low_complexity Low_complexity 1 23 0 8 804 1181 68 0 0 chr17 28786622 28786770 -66485881 - B1_Mus1 SINE Alu 0 148 1 8 804 582 122 0 43 chr17 28786951 28787045 -66485606 - RMER10B LTR ERVL -51 347 258 8 804 26 0 0 0 chr17 28787567 28787593 -66485058 + AT_rich Low_complexity Low_complexity 1 26 0 8 804 780 173 89 36 chr17 28787608 28787776 -66484875 - B2_Mm2 SINE B2 -14 181 5 8 804 677 53 0 11 chr17 28787886 28787908 -66484743 + (TC)n Simple_repeat Simple_repeat 1 22 0 8 804 822 113 0 0 chr17 28787908 28788032 -66484619 + (TCC)n Simple_repeat Simple_repeat 2 125 0 8 804 677 53 0 11 chr17 28788032 28788104 -66484547 + (TC)n Simple_repeat Simple_repeat 1 72 0 8 804 705 197 39 78 chr17 28788123 28788256 -66484395 - B1_Mus1 SINE Alu 0 148 16 8 804 1469 69 5 0 chr17 28788256 28788445 -66484206 + B2_Mm1a SINE B2 2 191 -2 8 804 705 197 39 78 chr17 28788445 28788465 -66484186 - B1_Mus1 SINE Alu -133 15 1 8 804 1400 80 0 6 chr17 28788585 28788762 -66483889 + B2_Mm2 SINE B2 1 176 -19 8 804 505 277 21 42 chr17 28788822 28788965 -66483686 - B4A SINE B4 -124 168 29 8 804 189 0 0 0 chr17 28788966 28788987 -66483664 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 8 804 1180 51 0 0 chr17 28788987 28789124 -66483527 - B1_Mus2 SINE Alu -9 138 2 8 804 975 177 58 15 chr17 28789141 28789347 -66483304 - B3 SINE B2 0 216 2 8 804 670 229 0 41 chr17 28789947 28790093 -66482558 - B1_Mur2 SINE Alu -9 140 1 8 804 210 143 0 0 chr17 28790093 28790128 -66482523 + (TA)n Simple_repeat Simple_repeat 2 36 0 8 804 814 222 85 10 chr17 28790144 28790344 -66482307 - B3 SINE B2 -1 215 1 8 804 254 95 24 0 chr17 28790565 28790607 -66482044 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 8 804 1279 20 0 7 chr17 28790609 28790756 -66481895 - B1_Mm SINE Alu 0 147 2 8 804 489 200 57 0 chr17 28791482 28791587 -66481064 - PB1D10 SINE Alu -6 111 1 8 804 245 283 162 57 chr17 28792398 28792503 -66480148 - PB1D10 SINE Alu 0 117 2 8 804 257 119 24 0 chr17 28792503 28792545 -66480106 + L1MB7 LINE L1 6108 6150 -34 8 804 246 247 11 21 chr17 28792549 28792644 -66480007 + L1M5 LINE L1 3334 3427 -2719 8 804 909 254 70 11 chr17 28792699 28792985 -66479666 + MTE2b LTR MaLR 1 303 -76 8 804 1523 63 16 0 chr17 28793124 28793315 -66479336 + B2_Mm2 SINE B2 2 195 0 8 804 312 300 40 0 chr17 28793336 28793436 -66479215 + L1M5 LINE L1 3489 3592 -2554 8 804 363 229 11 21 chr17 28793848 28794137 -66478514 + (TG)n Simple_repeat Simple_repeat 1 285 0 8 804 1227 79 24 0 chr17 28794346 28794511 -66478140 + B2_Mm2 SINE B2 13 181 -14 8 804 788 82 0 9 chr17 28794508 28794609 -66478042 + B1_Mur4 SINE Alu 38 138 -12 8 804 495 48 0 0 chr17 28794609 28794671 -66477980 + (GA)n Simple_repeat Simple_repeat 1 62 0 8 804 344 253 15 12 chr17 28795161 28795246 -66477405 + ID4_ SINE ID 7 88 -64 8 804 579 255 14 20 chr17 28795380 28795528 -66477123 - ID_B1 SINE B4 0 224 78 8 804 2836 38 14 12 chr17 28795683 28796028 -66476623 + ORR1A1 LTR MaLR 1 346 0 8 804 251 205 165 24 chr17 28796227 28796312 -66476339 + PB1D10 SINE Alu 14 110 -7 8 804 355 188 35 122 chr17 28796329 28796444 -66476207 + MT2B LTR ERVL 153 257 -344 8 804 946 129 7 7 chr17 28796349 28796489 -66476162 + B1_Mus2 SINE Alu 8 147 0 8 804 293 208 110 14 chr17 28796843 28796916 -66475735 + B4A SINE B4 147 226 -66 8 804 817 246 11 32 chr17 28796933 28797118 -66475533 + B3A SINE B2 2 182 -16 8 804 299 265 0 14 chr17 28797151 28797220 -66475431 + B4A SINE B4 217 284 -8 8 804 278 317 19 0 chr17 28797300 28797404 -66475247 + L1MA8 LINE L1 6060 6165 -126 8 804 323 269 142 19 chr17 28797425 28797531 -66475120 + PB1D7 SINE Alu 2 120 0 8 804 1158 76 7 0 chr17 28797709 28797854 -66474797 + B1_Mus1 SINE Alu 2 147 -1 8 804 318 344 39 23 chr17 28797872 28798000 -66474651 + RSINE1 SINE B4 15 144 -21 8 804 33 0 0 0 chr17 28798030 28798063 -66474588 + AT_rich Low_complexity Low_complexity 1 33 0 8 804 456 287 0 19 chr17 28798079 28798182 -66474469 + PB1D7 SINE Alu 17 117 -3 8 804 192 40 0 0 chr17 28798185 28798210 -66474441 + (CAGAGA)n Simple_repeat Simple_repeat 2 26 0 8 804 1077 177 39 0 chr17 28798254 28798457 -66474194 + B3 SINE B2 1 211 -5 8 804 541 222 17 131 chr17 28798513 28798689 -66473962 - B3A SINE B2 -1 197 35 8 804 239 51 103 0 chr17 28798707 28798746 -66473905 - B1_Mus2 SINE Alu -34 113 71 8 804 409 225 0 0 chr17 28799147 28799218 -66473433 - ID4 SINE ID -11 72 2 9 804 211 225 0 0 chr17 28799228 28799268 -66473383 - PB1 SINE Alu -2 125 86 9 804 691 195 90 52 chr17 28799268 28799479 -66473172 + Lx4B LINE L1 6839 7057 -1 9 804 400 310 26 8 chr17 28799479 28799596 -66473055 - B1F1 SINE Alu -30 119 1 9 804 255 311 0 13 chr17 28799529 28799604 -66473047 - B4A SINE B4 -141 151 78 9 804 502 137 83 10 chr17 28799707 28799803 -66472848 - B1_Mur1 SINE Alu -10 139 37 9 804 237 324 81 54 chr17 28800004 28800115 -66472536 - RSINE1 SINE B4 -51 114 1 9 804 257 0 30 0 chr17 28800124 28800157 -66472494 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 9 804 672 87 147 0 chr17 28800157 28800274 -66472377 - B1_Mus2 SINE Alu -9 141 9 9 804 2469 150 21 3 chr17 28800718 28801106 -66471545 + MTC LTR MaLR 1 395 -26 9 804 216 0 0 0 chr17 28801150 28801174 -66471477 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9 804 1150 71 0 0 chr17 28801174 28801315 -66471336 - B1_Mus1 SINE Alu -7 141 1 9 804 315 71 0 0 chr17 28801373 28801415 -66471236 + (TTTC)n Simple_repeat Simple_repeat 2 43 0 9 804 1254 84 78 6 chr17 28801424 28801604 -66471047 - B2_Mm2 SINE B2 -2 193 1 9 804 1874 193 278 8 chr17 28801604 28802094 -66470557 - RLTR33 LTR ERVK -56 622 1 9 804 409 243 110 93 chr17 28802623 28802715 -66469936 + ID_B1 SINE B4 87 185 -39 9 804 3777 52 0 4 chr17 28802715 28803180 -66469471 + L1Md_F2 LINE L1 6119 6581 -1 9 804 409 243 110 93 chr17 28803180 28803205 -66469446 + ID_B1 SINE B4 186 206 -18 9 804 977 112 35 0 chr17 28803288 28803431 -66469220 + B1_Mur4 SINE Alu 3 150 0 9 804 431 271 3 6 chr17 28803469 28803805 -66468846 + GA-rich Low_complexity Low_complexity 1 334 0 9 804 265 242 0 46 chr17 28803813 28803878 -66468773 + 4.5SRNA scRNA scRNA 28 89 -5 9 804 459 143 0 0 chr17 28803823 28803893 -66468758 + B1_Mur2 SINE Alu 40 109 -40 9 804 453 66 0 0 chr17 28803997 28804058 -66468593 + (TG)n Simple_repeat Simple_repeat 2 62 0 9 804 598 245 43 0 chr17 28804070 28804209 -66468442 - B3A SINE B2 -44 154 10 9 804 1332 20 0 0 chr17 28804247 28804394 -66468257 - B1_Mm SINE Alu 0 147 1 9 804 980 193 0 0 chr17 28804475 28804646 -66468005 - B3 SINE B2 -45 171 1 9 804 302 325 60 13 chr17 28804888 28805122 -66467529 - L1MDa LINE L1 -4809 1824 1580 9 804 523 262 0 0 chr17 28805140 28805243 -66467408 - PB1 SINE Alu -9 118 16 9 804 270 327 143 7 chr17 28805303 28805457 -66467194 - MIRb SINE MIR -25 243 69 9 804 968 50 7 86 chr17 28805821 28805973 -66466678 - B1_Mus1 SINE Alu 0 148 9 9 804 525 244 44 138 chr17 28805823 28806004 -66466647 - B4 SINE B4 -69 223 60 9 804 386 270 147 17 chr17 28806137 28806314 -66466337 - ORR1E LTR MaLR -127 232 33 9 804 3532 34 0 128 chr17 28806342 28806842 -66465809 + RLTR10C LTR ERVK 1 436 0 9 804 385 114 13 114 chr17 28807319 28807398 -66465253 + B1_Mur1 SINE Alu 73 143 -6 9 804 1112 84 0 7 chr17 28807919 28808063 -66464588 - B1_Mus2 SINE Alu 0 147 5 9 804 394 261 170 24 chr17 28808095 28808260 -66464391 + MTE-int LTR MaLR 1355 1543 -37 9 804 291 297 0 0 chr17 28808369 28808443 -66464208 + (CATG)n Simple_repeat Simple_repeat 1 74 0 9 804 207 276 0 0 chr17 28808460 28808547 -66464104 + (TG)n Simple_repeat Simple_repeat 2 88 0 9 804 324 339 0 32 chr17 28808573 28808707 -66463944 + (TG)n Simple_repeat Simple_repeat 1 129 0 9 804 1204 43 0 0 chr17 28808707 28808846 -66463805 - B1_Mus2 SINE Alu -8 139 1 9 804 324 339 0 32 chr17 28808846 28808856 -66463795 + (TG)n Simple_repeat Simple_repeat 1 10 0 9 804 1371 77 33 0 chr17 28808856 28809037 -66463614 - B2_Mm1a SINE B2 -6 187 1 9 804 324 339 0 32 chr17 28809037 28809109 -66463542 + (TG)n Simple_repeat Simple_repeat 1 72 0 9 804 2244 95 30 36 chr17 28809206 28809535 -66463116 + ORR1A2 LTR MaLR 1 327 0 9 804 622 306 39 0 chr17 28809929 28810135 -66462516 - ID_B1 SINE B4 -9 215 2 9 804 626 285 36 68 chr17 28810248 28810470 -66462181 + B3A SINE B2 1 215 -1 9 804 1206 62 0 0 chr17 28810601 28810747 -66461904 - B1_Mus2 SINE Alu 0 147 2 9 804 1228 114 32 11 chr17 28810749 28810935 -66461716 - B2_Mm2 SINE B2 -5 190 1 9 804 640 191 61 0 chr17 28810997 28811112 -66461539 + B1_Mur1 SINE Alu 22 143 -6 9 804 333 0 0 0 chr17 28811112 28811149 -66461502 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 9 804 369 261 54 78 chr17 28811195 28811361 -66461290 - RSINE1 SINE B4 -2 163 2 9 804 324 313 59 20 chr17 28811834 28811987 -66460664 - LTR87 LTR ERVL? -9 615 457 9 804 319 306 100 0 chr17 28812114 28812284 -66460367 + L1MA4 LINE L1 5744 5930 -370 9 804 615 50 30 0 chr17 28812533 28812633 -66460018 + (TC)n Simple_repeat Simple_repeat 2 104 0 9 804 288 77 0 0 chr17 28812744 28812783 -66459868 + (TGAA)n Simple_repeat Simple_repeat 2 40 0 9 804 283 196 31 0 chr17 28812790 28812802 -66459849 + ORR1B1-int LTR MaLR 634 648 -861 9 804 701 35 0 0 chr17 28812802 28812889 -66459762 + B1_Mm SINE Alu 2 88 -59 9 804 416 298 73 68 chr17 28813275 28813466 -66459185 - MER20 DNA MER1_type -24 195 4 9 804 563 174 71 35 chr17 28813621 28813734 -66458917 + B3 SINE B2 7 123 -93 9 804 1375 84 5 10 chr17 28813734 28813926 -66458725 - B2_Mm2 SINE B2 -4 191 1 9 804 291 54 0 0 chr17 28813942 28813979 -66458672 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 9 804 445 143 0 117 chr17 28813992 28814103 -66458548 - RSINE1 SINE B4 -36 129 32 9 804 665 210 102 60 chr17 28814475 28814554 -66458097 + ID SINE ID 1 86 -138 9 804 304 283 121 0 chr17 28814554 28814653 -66457998 + PB1D10 SINE Alu 2 112 -5 9 804 468 91 0 0 chr17 28814663 28814729 -66457922 + (GGAA)n Simple_repeat Simple_repeat 4 69 0 9 804 248 235 55 68 chr17 28814736 28814809 -66457842 + MT2B LTR ERVL 169 240 -361 9 804 303 224 45 0 chr17 28814751 28814818 -66457833 + B1_Mm SINE Alu 23 92 -55 9 804 444 269 59 0 chr17 28814871 28814990 -66457661 + PB1 SINE Alu 1 126 -1 9 804 917 160 40 23 chr17 28815020 28815193 -66457458 - URR1B DNA MER1_type 0 225 50 9 804 1393 17 114 17 chr17 28815316 28815491 -66457160 - B2_Mm1a SINE B2 -1 192 1 9 804 986 188 8 148 chr17 28815630 28815817 -66456834 - B3 SINE B2 -7 209 48 9 804 844 102 17 17 chr17 28815817 28815937 -66456714 + PB1D9 SINE Alu 1 120 0 9 804 986 188 8 148 chr17 28815937 28815992 -66456659 - B3 SINE B2 -169 47 1 9 804 188 336 22 67 chr17 28816031 28816165 -66456486 - MIR3 SINE MIR -76 132 5 9 804 283 297 107 63 chr17 28816560 28816765 -66455886 + B4 SINE B4 44 257 -35 9 804 507 33 0 0 chr17 28816768 28816829 -66455822 + (CA)n Simple_repeat Simple_repeat 1 61 0 9 804 437 327 89 74 chr17 28817887 28818009 -66454642 + Charlie4a DNA MER1_type 5 132 -376 9 804 348 256 138 8 chr17 28818009 28818139 -66454512 - B1F1 SINE Alu -2 147 1 9 804 437 327 89 74 chr17 28818139 28818419 -66454232 + Charlie4a DNA MER1_type 133 413 -95 9 804 440 299 32 64 chr17 28818437 28818594 -66454057 + B3A SINE B2 46 197 -1 9 804 687 123 148 9 chr17 28818600 28818715 -66453936 + B1_Mus1 SINE Alu 18 148 0 9 804 1142 82 0 33 chr17 28818751 28818903 -66453748 - B1_Mus1 SINE Alu 0 148 2 9 804 253 250 85 96 chr17 28819017 28819172 -66453479 + MT2B LTR ERVL 100 263 -321 9 804 623 228 21 35 chr17 28819069 28819210 -66453441 + B1F SINE Alu 6 144 -5 9 804 303 250 33 0 chr17 28819226 28819286 -66453365 + tRNA-Ala-GCG tRNA tRNA 5 66 -9 9 804 250 284 84 47 chr17 28819286 28819333 -66453318 + BC1_Mm scRNA scRNA 11 121 -31 9 804 431 209 35 0 chr17 28819373 28819459 -66453192 + B3 SINE B2 1 89 -127 9 804 960 296 72 60 chr17 28819466 28820037 -66452614 + L1MB4 LINE L1 5603 6180 0 9 804 506 255 138 70 chr17 28820061 28820289 -66452362 + ID_B1 SINE B4 6 247 -45 9 804 728 177 8 15 chr17 28820478 28820610 -66452041 - RSINE1 SINE B4 -33 132 2 9 804 599 192 117 0 chr17 28820876 28820996 -66451655 - B1_Mus1 SINE Alu -8 140 7 9 804 230 288 88 81 chr17 28821067 28821203 -66451448 + MLT1A1 LTR MaLR 270 406 -2 9 804 597 64 0 0 chr17 28821243 28821321 -66451330 + (CA)n Simple_repeat Simple_repeat 2 79 0 9 804 985 33 0 0 chr17 28821346 28821467 -66451184 + B1_Mus2 SINE Alu 27 147 0 9 804 189 0 0 0 chr17 28821467 28821488 -66451163 + (A)n Simple_repeat Simple_repeat 1 21 0 9 804 242 138 17 0 chr17 28821495 28821553 -66451098 + (CA)n Simple_repeat Simple_repeat 2 60 0 9 804 1094 57 43 0 chr17 28821878 28822018 -66450633 + B1_Mus1 SINE Alu 3 148 0 9 804 22 0 0 0 chr17 28822175 28822197 -66450454 + AT_rich Low_complexity Low_complexity 1 22 0 9 804 725 222 0 40 chr17 28822199 28822349 -66450302 + B1_Mur1 SINE Alu 2 145 -4 9 804 1415 67 0 40 chr17 28822396 28822436 -66450215 - B2_Mm1a SINE B2 0 193 161 9 804 315 0 0 0 chr17 28822436 28822471 -66450180 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 9 804 1415 67 0 40 chr17 28822471 28822631 -66450020 - B2_Mm1a SINE B2 -33 160 1 9 804 22 0 0 0 chr17 28822631 28822653 -66449998 + AT_rich Low_complexity Low_complexity 1 22 0 9 804 468 296 99 11 chr17 28822708 28822724 -66449927 - B3A SINE B2 -1 197 182 9 804 1199 68 0 0 chr17 28822724 28822870 -66449781 - B1_Mus1 SINE Alu 0 148 3 9 804 468 296 99 11 chr17 28822870 28823034 -66449617 - B3A SINE B2 -17 181 2 9 804 509 273 0 8 chr17 28823040 28823162 -66449489 - ID_B1 SINE B4 -5 219 99 1 804 341 247 75 11 chr17 28823410 28823504 -66449147 + PB1D10 SINE Alu 4 103 -14 1 804 198 0 0 0 chr17 28823589 28823611 -66449040 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 804 685 230 21 7 chr17 28823638 28823778 -66448873 - B1_Mur1 SINE Alu -7 142 1 1 804 180 0 0 0 chr17 28823779 28823799 -66448852 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1 804 575 269 85 39 chr17 28823928 28824110 -66448541 + B3 SINE B2 1 175 -41 1 804 211 176 0 0 chr17 28824702 28824736 -66447915 + G-rich Low_complexity Low_complexity 3 36 0 1 804 531 247 86 7 chr17 28824762 28824913 -66447738 + RSINE1 SINE B4 3 165 0 1 804 445 234 154 15 chr17 28824960 28825090 -66447561 + B1F2 SINE Alu 1 148 -1 1 804 219 36 0 0 chr17 28825164 28825192 -66447459 + (G)n Simple_repeat Simple_repeat 1 28 0 1 804 765 134 54 24 chr17 28825192 28825339 -66447312 + B1_Mur1 SINE Alu 1 149 0 1 804 328 264 136 94 chr17 28825432 28825645 -66447006 - ID_B1 SINE B4 -68 224 3 1 804 180 0 0 0 chr17 28825951 28825971 -66446680 + (A)n Simple_repeat Simple_repeat 1 20 0 1 804 261 0 0 0 chr17 28826504 28826533 -66446118 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 1 804 300 53 0 0 chr17 28827326 28827364 -66445287 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 1 804 226 214 0 0 chr17 28827685 28827727 -66444924 - ID4_ SINE ID -5 78 37 1 804 233 261 122 22 chr17 28829852 28829942 -66442709 - PB1D9 SINE Alu -20 100 2 1 804 226 268 0 0 chr17 28830754 28830825 -66441826 + ID4 SINE ID 2 72 -11 1 804 540 210 21 25 chr17 28831140 28831269 -66441382 - B1_Mm SINE Alu 0 120 1 1 804 217 150 0 24 chr17 28832420 28832461 -66440190 + CT-rich Low_complexity Low_complexity 2 41 0 1 804 336 254 0 0 chr17 28832474 28832545 -66440106 - PB1D10 SINE Alu -40 77 7 1 804 513 47 0 0 chr17 28832738 28832802 -66439849 + (TG)n Simple_repeat Simple_repeat 2 65 0 1 804 739 188 189 22 chr17 28832811 28832991 -66439660 - B3 SINE B2 -6 210 1 1 804 210 150 0 0 chr17 28833906 28833946 -66438705 + (T)n Simple_repeat Simple_repeat 1 40 0 1 804 237 155 0 0 chr17 28834325 28834383 -66438268 + CT-rich Low_complexity Low_complexity 2 59 0 1 804 255 61 0 0 chr17 28834385 28834418 -66438233 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 804 865 203 141 39 chr17 28834838 28835094 -66437557 + B4A SINE B4 5 286 -6 1 805 312 27 0 0 chr17 28835853 28835890 -66436761 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 805 687 271 72 43 chr17 28835903 28836181 -66436470 - B4A SINE B4 -2 290 5 1 805 772 200 0 0 chr17 28836348 28836473 -66436178 + B3 SINE B2 4 128 -88 1 805 333 0 0 0 chr17 28836523 28836560 -66436091 + (T)n Simple_repeat Simple_repeat 1 37 0 1 805 222 128 0 0 chr17 28837180 28837219 -66435432 + (T)n Simple_repeat Simple_repeat 1 39 0 1 805 1139 68 0 7 chr17 28837219 28837367 -66435284 - B1_Mus2 SINE Alu 0 147 1 1 805 366 119 50 17 chr17 28837436 28837496 -66435155 + B1F1 SINE Alu 88 149 0 1 805 357 289 47 55 chr17 28837578 28837706 -66434945 - B1F2 SINE Alu -14 135 9 1 805 284 322 90 8 chr17 28837602 28837724 -66434927 - B4 SINE B4 -91 201 70 1 805 630 228 193 47 chr17 28837977 28838189 -66434462 - B4 SINE B4 0 292 50 1 805 393 295 0 9 chr17 28838392 28838505 -66434146 + PB1D10 SINE Alu 2 113 -4 1 805 1404 185 164 12 chr17 28838643 28838745 -66433906 - MTE2b LTR MaLR 0 379 276 1 805 378 0 0 0 chr17 28838745 28838787 -66433864 + (TGG)n Simple_repeat Simple_repeat 1 42 0 1 805 1404 185 164 12 chr17 28838787 28839013 -66433638 - MTE2b LTR MaLR -104 275 2 1 805 718 38 248 0 chr17 28839501 28839606 -66433045 + B1_Mus2 SINE Alu 17 147 0 1 805 192 40 0 0 chr17 28839606 28839631 -66433020 + (CAAAAA)n Simple_repeat Simple_repeat 4 28 0 1 805 225 293 160 0 chr17 28839830 28839905 -66432746 - L2c LINE L2 -41 3346 3260 1 805 469 233 211 39 chr17 28840260 28840416 -66432235 + B3A SINE B2 1 183 -15 1 805 1435 52 0 0 chr17 28840454 28840628 -66432023 - MTB_Mm LTR MaLR -53 354 181 1 805 551 60 12 0 chr17 28840645 28840728 -66431923 - L1Md_F2 LINE L1 -2 6580 6497 1 805 270 313 142 7 chr17 28840739 28840887 -66431764 - MIRc SINE MIR -41 227 60 1 805 247 25 50 0 chr17 28840902 28840942 -66431709 + (TTTG)n Simple_repeat Simple_repeat 4 45 0 1 805 1128 78 78 68 chr17 28840997 28841020 -66431631 - B2_Mm2 SINE B2 0 195 183 1 805 1035 144 201 0 chr17 28841020 28841194 -66431457 - B3 SINE B2 -6 210 2 1 805 1128 78 78 68 chr17 28841194 28841207 -66431444 - B2_Mm2 SINE B2 -13 182 172 1 805 207 0 0 0 chr17 28841207 28841230 -66431421 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1 805 1128 78 78 68 chr17 28841230 28841384 -66431267 - B2_Mm2 SINE B2 -24 171 3 1 805 1199 123 37 0 chr17 28841430 28841617 -66431034 + B2_Mm2 SINE B2 2 195 0 1 805 197 135 0 19 chr17 28841660 28841713 -66430938 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 1 805 319 299 184 10 chr17 28841806 28842012 -66430639 - Tigger5 DNA MER2_type -2164 242 1 1 805 584 307 50 50 chr17 28842338 28842540 -66430111 - MER20 DNA MER1_type 0 219 18 1 805 1454 68 21 5 chr17 28842541 28842732 -66429919 - B2_Mm2 SINE B2 0 195 2 1 805 615 293 71 79 chr17 28842747 28842869 -66429782 + MLT1F1 LTR MaLR 275 395 -174 1 805 989 198 58 29 chr17 28842869 28843077 -66429574 + B3 SINE B2 2 215 -1 1 805 615 276 83 61 chr17 28843077 28843243 -66429408 + MLT1F1 LTR MaLR 396 561 -8 1 805 314 258 234 0 chr17 28843714 28843842 -66428809 - MLT1F LTR MaLR -193 355 198 1 805 572 211 70 39 chr17 28843887 28844015 -66428636 + B4 SINE B4 85 216 -76 1 805 346 290 73 10 chr17 28845042 28845154 -66427497 - PB1D7 SINE Alu -8 112 1 1 805 207 0 0 0 chr17 28845157 28845180 -66427471 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 805 333 0 0 0 chr17 28845180 28845216 -66427435 + (GA)n Simple_repeat Simple_repeat 1 37 0 1 805 960 65 105 28 chr17 28845227 28845370 -66427281 - B2_Mm2 SINE B2 -8 187 34 1 805 539 195 42 146 chr17 28845432 28845576 -66427075 - RSINE1 SINE B4 -36 129 1 1 805 902 150 14 0 chr17 28845750 28845897 -66426754 + B1_Mur4 SINE Alu 2 150 0 1 805 319 277 35 18 chr17 28845930 28846044 -66426607 + PB1D10 SINE Alu 1 116 -1 1 805 327 299 142 0 chr17 28846288 28846422 -66426229 - MIR SINE MIR -90 172 20 1 805 540 280 77 0 chr17 28847614 28847757 -66424894 - RSINE1 SINE B4 -10 155 2 1 805 469 296 0 0 chr17 28847799 28847897 -66424754 + ID_B1 SINE B4 98 195 -29 1 805 335 286 26 0 chr17 28847907 28847984 -66424667 - ORR1E LTR MaLR -280 79 1 1 805 312 274 188 22 chr17 28848289 28848427 -66424224 - MER5A1 DNA MER1_type -2 164 4 1 805 303 281 71 20 chr17 28848492 28848590 -66424061 - MER5A1 DNA MER1_type -60 106 9 1 805 384 22 0 0 chr17 28848753 28848798 -66423853 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 805 508 286 60 38 chr17 28850138 28850323 -66422328 + MER58A DNA MER1_type 36 224 0 1 805 210 37 0 0 chr17 28850484 28850511 -66422140 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 1 805 1076 62 14 20 chr17 28850515 28850662 -66421989 - B1_Mm SINE Alu -1 146 1 1 805 694 220 72 17 chr17 28851058 28851238 -66421413 - B3 SINE B2 0 216 27 1 805 902 154 0 32 chr17 28851272 28851426 -66421225 - B1_Mur3 SINE Alu 0 149 1 1 805 276 185 0 156 chr17 28851430 28851445 -66421206 - B1F1 SINE Alu -1 148 137 1 805 300 27 0 0 chr17 28851445 28851482 -66421169 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1 805 276 185 0 156 chr17 28851482 28851543 -66421108 - B1F1 SINE Alu -13 136 84 1 805 741 224 11 6 chr17 28851672 28851822 -66420829 + B3A SINE B2 1 149 -67 1 805 348 64 0 0 chr17 28851822 28851869 -66420782 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 805 639 293 37 60 chr17 28851869 28851936 -66420715 + B3 SINE B2 150 213 -3 1 805 350 269 86 9 chr17 28852046 28852151 -66420500 + PB1D10 SINE Alu 4 116 -1 1 805 273 289 36 0 chr17 28852759 28852842 -66419809 - LTR16E2 LTR ERVL -68 500 415 1 805 724 252 294 57 chr17 28853043 28853335 -66419316 + MTE2a LTR MaLR 12 372 -7 1 805 2130 156 79 25 chr17 28853766 28854208 -66418443 + RMER4A LTR ERVK 1 466 0 1 805 649 244 140 41 chr17 28855137 28855165 -66417486 - B3 SINE B2 -27 189 164 1 805 207 0 0 0 chr17 28855165 28855188 -66417463 + (TATG)n Simple_repeat Simple_repeat 2 24 0 1 805 649 244 140 41 chr17 28855188 28855330 -66417321 - B3 SINE B2 -53 163 2 1 805 189 0 0 0 chr17 28856107 28856128 -66416523 + (T)n Simple_repeat Simple_repeat 1 21 0 1 805 1139 42 0 7 chr17 28856128 28856272 -66416379 - B1_Mus1 SINE Alu 0 148 6 1 805 255 282 26 0 chr17 28856403 28856481 -66416170 + CT-rich Low_complexity Low_complexity 2 81 0 1 805 389 195 26 0 chr17 28856483 28856560 -66416091 - PB1D9 SINE Alu -2 118 40 1 805 417 306 7 63 chr17 28856588 28856731 -66415920 - ID_B1 SINE B4 -3 221 87 1 805 248 259 17 0 chr17 28856692 28856750 -66415901 - ID4_ SINE ID -2 81 23 1 805 314 175 0 66 chr17 28857508 28857569 -66415082 + B1_Mur3 SINE Alu 93 149 0 1 805 220 162 52 117 chr17 28859083 28859160 -66413491 - RSINE1 SINE B4 0 165 94 1 805 343 245 96 0 chr17 28859275 28859369 -66413282 + PB1D10 SINE Alu 4 106 -11 1 805 213 226 79 16 chr17 28859390 28859453 -66413198 + ID2 SINE ID 17 83 0 1 805 605 265 30 0 chr17 28859553 28859685 -66412966 - RSINE1 SINE B4 -2 163 28 1 805 911 97 33 33 chr17 28859770 28859920 -66412731 - B1_Mur4 SINE Alu 0 150 1 1 805 660 258 84 0 chr17 28859961 28860128 -66412523 - B3A SINE B2 -17 181 1 1 805 352 183 195 0 chr17 28860716 28860798 -66411853 - ORR1D1 LTR MaLR -2 382 285 1 805 608 169 148 0 chr17 28860824 28860879 -66411772 - ORR1D1 LTR MaLR -211 163 103 1 805 1706 159 187 17 chr17 28860879 28861237 -66411414 - MTC LTR MaLR -2 419 1 1 805 608 169 148 0 chr17 28861237 28861323 -66411328 - ORR1D1 LTR MaLR -272 102 3 1 805 494 242 91 8 chr17 28861323 28861444 -66411207 + ID_B1 SINE B4 93 223 -1 1 805 210 71 0 0 chr17 28861645 28861673 -66410978 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 805 180 103 0 0 chr17 28863649 28863663 -66408988 + (A)n Simple_repeat Simple_repeat 1 14 0 1 805 2311 61 0 17 chr17 28863663 28863979 -66408672 + L1_Mus2 LINE L1 6270 6566 0 1 805 531 0 0 0 chr17 28864006 28864065 -66408586 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 1 805 1028 85 43 0 chr17 28864069 28864210 -66408441 - B1_Mus1 SINE Alu 0 148 2 1 805 692 237 70 6 chr17 28864230 28864394 -66408257 + B3 SINE B2 45 212 -4 1 805 1849 131 28 22 chr17 28864422 28864742 -66407909 - RLTRETN_Mm LTR ERVK 0 322 1 1 805 271 247 99 0 chr17 28865056 28865137 -66407514 - L1M5 LINE L1 -466 5713 5625 1 805 518 264 95 103 chr17 28867336 28867649 -66405002 - ORR1E LTR MaLR -36 338 19 1 805 978 315 201 32 chr17 28867663 28868452 -66404199 - MTE-int LTR MaLR -48 1532 569 1 805 198 0 0 0 chr17 28868456 28868478 -66404173 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 1 805 499 290 111 21 chr17 28868478 28868668 -66403983 - ID_B1 SINE B4 -12 212 6 1 805 896 208 60 40 chr17 28869679 28869879 -66402772 + B3 SINE B2 7 210 -6 1 805 228 260 40 0 chr17 28870200 28870250 -66402401 - ID SINE ID -168 56 5 1 805 803 9 266 0 chr17 28870281 28870390 -66402261 + B1_Mus2 SINE Alu 3 140 -7 1 805 198 167 0 0 chr17 28870394 28870430 -66402221 + A-rich Low_complexity Low_complexity 3 38 0 1 805 1720 16 0 15 chr17 28870512 28870708 -66401943 + B2_Mm1t SINE B2 1 193 0 1 805 207 0 0 0 chr17 28870708 28870731 -66401920 + (A)n Simple_repeat Simple_repeat 1 23 0 1 805 1413 56 39 0 chr17 28870760 28870939 -66401712 - B2_Mm1a SINE B2 -7 186 1 1 805 21 0 0 0 chr17 28871211 28871232 -66401419 + AT_rich Low_complexity Low_complexity 1 21 0 1 805 1207 35 0 14 chr17 28872008 28872155 -66400496 + B1_Mus2 SINE Alu 2 146 -1 1 805 210 71 0 0 chr17 28872157 28872185 -66400466 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 1 805 180 0 0 0 chr17 28872496 28872516 -66400135 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1 805 229 305 59 59 chr17 28872636 28872737 -66399914 - MER58A DNA MER1_type -93 131 31 1 805 226 234 76 30 chr17 28872985 28873051 -66399600 + PB1D10 SINE Alu 18 86 -34 1 805 260 172 15 45 chr17 28873857 28873924 -66398727 + T-rich Low_complexity Low_complexity 5 69 0 1 805 437 108 28 41 chr17 28874692 28874775 -66397876 + T-rich Low_complexity Low_complexity 62 144 0 1 805 1195 68 0 0 chr17 28874775 28874922 -66397729 - B1_Mus1 SINE Alu 0 148 2 1 805 437 108 28 41 chr17 28874922 28874983 -66397668 + T-rich Low_complexity Low_complexity 3 61 0 1 805 715 62 254 18 chr17 28875310 28875424 -66397227 + B1_Mm SINE Alu 1 141 -6 1 805 381 43 0 0 chr17 28875425 28875472 -66397179 + (GA)n Simple_repeat Simple_repeat 1 47 0 1 805 275 281 34 79 chr17 28875728 28875755 -66396896 + B4A SINE B4 68 90 -202 1 805 301 263 198 10 chr17 28875755 28875851 -66396800 + PB1D10 SINE Alu 3 116 -1 1 805 254 248 110 110 chr17 28876731 28876858 -66395793 + RSINE1 SINE B4 23 149 -16 1 805 1358 73 45 0 chr17 28878885 28879064 -66393587 - B2_Mm1t SINE B2 -5 188 2 1 805 458 268 15 52 chr17 28880992 28881126 -66391525 + B3 SINE B2 49 177 -39 1 805 1204 41 7 0 chr17 28881141 28881286 -66391365 + B1_Mus2 SINE Alu 1 146 -1 1 805 731 157 58 36 chr17 28882160 28882299 -66390352 - B1_Mus2 SINE Alu -1 146 5 1 805 1154 75 0 7 chr17 28882428 28882576 -66390075 + B1_Mus1 SINE Alu 1 147 -1 1 805 349 232 0 0 chr17 28882599 28882668 -66389983 + ID_B1 SINE B4 151 219 -5 1 805 186 174 0 0 chr17 28883401 28883447 -66389204 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 805 502 340 68 32 chr17 28886304 28886502 -66386149 + B4 SINE B4 3 212 -80 1 805 725 200 247 0 chr17 28886502 28886672 -66385979 + B3 SINE B2 1 212 -4 1 805 502 340 68 32 chr17 28886672 28886753 -66385898 + B4 SINE B4 213 291 -1 1 805 367 311 58 58 chr17 28887682 28887856 -66384795 - MER20 DNA MER1_type -1 218 45 1 805 556 219 89 8 chr17 28887997 28888121 -66384530 + B1_Mus2 SINE Alu 1 134 -13 1 805 595 57 23 0 chr17 28888121 28888209 -66384442 + (TGAA)n Simple_repeat Simple_repeat 1 90 0 1 805 521 206 146 19 chr17 28888365 28888523 -66384128 + B3A SINE B2 5 182 -16 1 805 818 181 0 20 chr17 28889108 28889260 -66383391 + B1_Mur3 SINE Alu 1 149 0 1 805 1030 117 10 72 chr17 28889287 28889480 -66383171 + B2_Mm2 SINE B2 8 188 -7 1 805 903 147 0 7 chr17 28889494 28889638 -66383013 + B1_Mus2 SINE Alu 1 143 -4 1 805 549 68 0 0 chr17 28889639 28889713 -66382938 + (TG)n Simple_repeat Simple_repeat 1 74 0 1 805 824 201 25 6 chr17 28889715 28889875 -66382776 - B3A SINE B2 -30 168 6 1 805 219 103 0 0 chr17 28889893 28889932 -66382719 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 1 805 581 68 11 74 chr17 28889933 28890028 -66382623 - B1_Mus2 SINE Alu 0 147 59 1 805 822 171 154 6 chr17 28890142 28890324 -66382327 + B3 SINE B2 1 209 -7 1 805 265 318 115 72 chr17 28890338 28890367 -66382284 + B4 SINE B4 53 87 -205 1 805 449 220 27 126 chr17 28890367 28890525 -66382126 + B1_Mur1 SINE Alu 3 143 -6 1 805 645 284 50 23 chr17 28890569 28890789 -66381862 + B4A SINE B4 1 226 -66 1 805 648 238 61 61 chr17 28890793 28890990 -66381661 + B3 SINE B2 14 210 -6 1 805 1009 46 0 0 chr17 28891023 28891154 -66381497 + B1_Mus2 SINE Alu 11 141 -6 1 805 237 33 0 0 chr17 28891161 28891191 -66381460 + (CAGA)n Simple_repeat Simple_repeat 2 31 0 1 805 375 249 0 0 chr17 28891429 28891598 -66381053 + (TG)n Simple_repeat Simple_repeat 1 169 0 1 805 498 220 0 0 chr17 28891611 28891788 -66380863 + (TG)n Simple_repeat Simple_repeat 2 178 0 1 805 1020 17 0 0 chr17 28891855 28891973 -66380678 + (TTC)n Simple_repeat Simple_repeat 2 119 0 1 805 971 58 29 0 chr17 28891976 28892113 -66380538 - B1_Mus1 SINE Alu -2 146 6 1 805 623 298 55 9 chr17 28892113 28892330 -66380321 - B4A SINE B4 -33 259 33 1 805 1412 63 11 0 chr17 28892390 28892581 -66380070 + B2_Mm1t SINE B2 1 193 0 1 805 1102 58 0 0 chr17 28892592 28892731 -66379920 + B1_Mus1 SINE Alu 1 139 -9 1 805 231 61 0 0 chr17 28892731 28892764 -66379887 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 805 549 0 0 0 chr17 28892764 28892824 -66379827 + (GA)n Simple_repeat Simple_repeat 2 62 0 1 805 981 88 0 7 chr17 28892833 28892971 -66379680 + B1_Mus1 SINE Alu 1 137 -11 1 805 234 81 0 0 chr17 28892971 28893008 -66379643 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1 805 564 15 0 0 chr17 28893008 28893072 -66379579 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 805 962 103 14 7 chr17 28893081 28893227 -66379424 + B1_Mus1 SINE Alu 1 147 -1 1 805 462 220 53 35 chr17 28893254 28893367 -66379284 + RSINE1 SINE B4 3 117 -48 1 805 425 250 9 0 chr17 28893814 28893926 -66378725 + PB1D10 SINE Alu 5 117 0 1 805 715 212 0 78 chr17 28893941 28894120 -66378531 + RSINE1 SINE B4 1 165 0 1 805 290 313 84 34 chr17 28894195 28894314 -66378337 + MER20 DNA MER1_type 32 156 -63 1 805 464 165 12 0 chr17 28894406 28894491 -66378160 + RSINE1 SINE B4 2 87 -78 1 805 247 343 19 10 chr17 28894491 28894509 -66378142 + B3A SINE B2 1 104 -94 1 805 917 134 45 39 chr17 28894701 28894879 -66377772 + B2_Mm1a SINE B2 1 179 -14 1 805 314 193 0 5 chr17 28894892 28894957 -66377694 + B2_Mm2 SINE B2 47 109 -107 1 805 26 30 0 0 chr17 28894969 28895002 -66377649 + AT_rich Low_complexity Low_complexity 1 33 0 1 805 1039 67 0 0 chr17 28895063 28895197 -66377454 - B1_Mus2 SINE Alu -12 135 2 1 805 336 300 41 8 chr17 28895680 28895801 -66376850 - B1F SINE Alu -7 142 18 1 805 351 320 0 37 chr17 28895892 28895999 -66376652 - RSINE1 SINE B4 -60 105 3 1 805 402 214 77 22 chr17 28896398 28896489 -66376162 + B3 SINE B2 40 135 -81 1 805 852 99 32 84 chr17 28896501 28896528 -66376123 + B1_Mur4 SINE Alu 3 29 -121 1 805 1321 76 0 42 chr17 28896528 28896721 -66375930 + B2_Mm2 SINE B2 2 186 -9 1 805 852 99 32 84 chr17 28896721 28896831 -66375820 + B1_Mur4 SINE Alu 30 138 -12 1 805 363 23 0 0 chr17 28896831 28896875 -66375776 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1 805 1166 61 0 0 chr17 28896879 28897027 -66375624 + B1_Mus1 SINE Alu 1 148 0 1 805 852 99 32 84 chr17 28897027 28897038 -66375613 + B1_Mur4 SINE Alu 139 146 -4 1 805 770 73 9 0 chr17 28897038 28897148 -66375503 + (GGAA)n Simple_repeat Simple_repeat 3 113 0 1 805 708 250 26 0 chr17 28897171 28897327 -66375324 - B3A SINE B2 -38 160 1 1 805 250 218 18 0 chr17 28897378 28897433 -66375218 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 805 215 185 50 0 chr17 28897445 28897564 -66375087 + (TTATA)n Simple_repeat Simple_repeat 5 129 0 1 805 483 194 0 0 chr17 28897559 28897662 -66374989 + (TA)n Simple_repeat Simple_repeat 2 104 0 1 805 233 300 101 58 chr17 28898257 28898395 -66374256 - MIRb SINE MIR -77 191 48 1 805 1394 70 0 5 chr17 28898560 28898746 -66373905 + B2_Mm2 SINE B2 5 189 -6 1 805 1152 41 0 7 chr17 28899243 28899390 -66373261 - B1_Mus1 SINE Alu -2 146 1 1 805 1231 82 0 6 chr17 28899541 28899712 -66372939 - B2_Mm2 SINE B2 -25 170 1 1 805 1038 97 14 0 chr17 28899716 28899861 -66372790 - B1_Mus2 SINE Alu 0 147 1 1 805 234 0 0 0 chr17 28899866 28899892 -66372759 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1 805 456 267 95 45 chr17 28899902 28900102 -66372549 - B3 SINE B2 -6 210 1 1 805 267 333 28 9 chr17 28900147 28900253 -66372398 - RSINE1 SINE B4 0 165 58 1 805 703 177 186 11 chr17 28900282 28900470 -66372181 - B4A SINE B4 -68 224 4 1 805 392 97 16 0 chr17 28900888 28900950 -66371701 + (TTTC)n Simple_repeat Simple_repeat 1 63 0 1 805 1206 28 0 0 chr17 28900950 28901092 -66371559 - B1_Mus1 SINE Alu -6 142 1 1 805 1249 84 51 0 chr17 28901096 28901274 -66371377 - B2_Mm2 SINE B2 -8 187 1 1 805 320 136 182 0 chr17 28901500 28901566 -66371085 + B1_Mur1 SINE Alu 72 149 0 1 805 1110 70 0 0 chr17 28901590 28901733 -66370918 + B1_Mus2 SINE Alu 2 144 -3 1 805 257 68 0 22 chr17 28901733 28901778 -66370873 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 1 805 798 300 16 16 chr17 28901780 28902073 -66370578 + Lx8 LINE L1 5610 5911 -1785 1 805 1316 62 23 0 chr17 28902356 28902532 -66370119 + B2_Mm2 SINE B2 2 181 -14 1 805 1155 68 0 0 chr17 28902649 28902796 -66369855 + B1_Mus2 SINE Alu 1 147 0 1 805 557 82 0 30 chr17 28902803 28902903 -66369748 + Lx2 LINE L1 6899 6995 -2 1 805 224 253 151 21 chr17 28903002 28903095 -66369556 - MIR SINE MIR -62 146 42 1 805 301 155 28 14 chr17 28903200 28903272 -66369379 + CT-rich Low_complexity Low_complexity 4 76 0 1 805 242 340 117 0 chr17 28903841 28904003 -66368648 + MIR SINE MIR 60 240 -22 1 805 517 208 9 0 chr17 28904406 28904512 -66368139 + B1_Mur1 SINE Alu 36 142 -7 1 805 814 0 0 0 chr17 28904521 28904663 -66367988 + L1Md_T LINE L1 6477 6582 0 1 805 1109 62 7 0 chr17 28904671 28904815 -66367836 + B1_Mus2 SINE Alu 1 145 -2 1 805 1111 64 126 17 chr17 28904843 28905018 -66367633 + B2_Mm2 SINE B2 2 195 0 1 805 896 55 39 15 chr17 28905360 28905490 -66367161 - B1_Mus1 SINE Alu -10 138 6 1 805 305 228 12 48 chr17 28905534 28905617 -66367034 - B3A SINE B2 -113 85 6 1 805 243 228 72 52 chr17 28905617 28905714 -66366937 - ID_B1 SINE B4 -5 219 121 1 805 184 225 0 40 chr17 28905716 28905790 -66366861 + CT-rich Low_complexity Low_complexity 4 74 0 1 805 372 214 138 35 chr17 28905844 28905960 -66366691 - B1F SINE Alu -16 133 6 1 805 204 237 8 63 chr17 28906161 28906287 -66366364 + (CGGGG)n Simple_repeat Simple_repeat 5 123 0 1 805 429 20 0 0 chr17 28906786 28906836 -66365815 + (TC)n Simple_repeat Simple_repeat 2 51 0 1 805 388 252 40 8 chr17 28908731 28908855 -66363796 - B1F2 SINE Alu -1 148 21 1 805 739 201 128 6 chr17 28908752 28908932 -66363719 - ID_B1 SINE B4 -21 203 2 1 805 1114 61 0 7 chr17 28908954 28909102 -66363549 - B1_Mus1 SINE Alu 0 148 2 1 805 350 214 20 0 chr17 28909804 28909902 -66362749 + (CATATA)n Simple_repeat Simple_repeat 5 104 0 1 805 453 304 93 6 chr17 28909902 28910064 -66362587 - B3A SINE B2 -18 180 5 1 805 278 308 40 32 chr17 28910072 28910196 -66362455 + MT2B LTR ERVL 145 269 -332 1 805 577 205 87 0 chr17 28910098 28910225 -66362426 + B1F2 SINE Alu 7 144 -5 1 805 350 252 0 8 chr17 28910262 28910284 -66362367 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 805 234 0 0 0 chr17 28910284 28910310 -66362341 + (GA)n Simple_repeat Simple_repeat 1 26 0 1 805 350 252 0 8 chr17 28910310 28910419 -66362232 + (TG)n Simple_repeat Simple_repeat 1 109 0 1 805 254 171 0 35 chr17 28910448 28910468 -66362183 + T-rich Low_complexity Low_complexity 63 82 0 1 805 1128 41 0 45 chr17 28910468 28910622 -66362029 - B1_Mm SINE Alu 0 147 1 1 805 254 171 0 35 chr17 28910622 28910686 -66361965 + T-rich Low_complexity Low_complexity 1 62 0 1 805 293 256 0 60 chr17 28911226 28911309 -66361342 - B4 SINE B4 0 292 215 1 805 482 234 62 28 chr17 28911294 28911326 -66361325 - B3 SINE B2 0 216 186 1 805 444 104 0 0 chr17 28911326 28911393 -66361258 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 805 482 234 62 28 chr17 28911393 28911505 -66361146 - B3 SINE B2 -31 185 67 1 805 1199 48 0 0 chr17 28911505 28911652 -66360999 + B1_Mus2 SINE Alu 1 147 0 1 805 243 0 0 0 chr17 28911652 28911679 -66360972 + (A)n Simple_repeat Simple_repeat 1 27 0 1 805 215 232 35 35 chr17 28911680 28911738 -66360913 - B3 SINE B2 -136 80 23 1 805 801 277 49 37 chr17 28911724 28911968 -66360683 - B4 SINE B4 -45 247 1 1 805 284 229 157 0 chr17 28911968 28912051 -66360600 - PB1D10 SINE Alu -18 99 4 1 805 444 135 0 0 chr17 28912422 28912496 -66360155 + (TC)n Simple_repeat Simple_repeat 1 74 0 1 805 200 214 0 0 chr17 28912705 28912747 -66359904 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 805 286 117 82 16 chr17 28912813 28912874 -66359777 - MIR3 SINE MIR -51 157 93 1 805 231 292 0 0 chr17 28912899 28913005 -66359646 + (TG)n Simple_repeat Simple_repeat 1 106 0 1 805 397 218 355 0 chr17 28913549 28913659 -66358992 - B1_Mur1 SINE Alu 0 149 1 1 805 604 251 127 30 chr17 28913671 28913868 -66358783 - ID_B1 SINE B4 -8 216 1 1 805 594 240 5 91 chr17 28913885 28914082 -66358569 - B3A SINE B2 0 198 19 1 805 252 89 178 0 chr17 28915469 28915514 -66357137 - B1F SINE Alu -26 123 71 1 805 580 159 8 74 chr17 28915529 28915651 -66357000 - PB1D9 SINE Alu -6 114 1 1 805 232 135 0 0 chr17 28915736 28915773 -66356878 - MLT1C LTR MaLR -382 85 49 1 805 263 275 0 0 chr17 28916334 28916403 -66356248 - MER103 DNA DNA -76 90 22 1 805 1293 82 11 0 chr17 28917162 28917346 -66355305 - B2_Mm1t SINE B2 -7 186 1 1 805 633 229 0 41 chr17 28917348 28917494 -66355157 - B1_Mur1 SINE Alu -3 146 7 1 805 21 0 0 0 chr17 28917823 28917844 -66354807 + AT_rich Low_complexity Low_complexity 1 21 0 1 805 207 0 0 0 chr17 28918966 28918989 -66353662 + (T)n Simple_repeat Simple_repeat 1 23 0 1 805 831 101 0 0 chr17 28918992 28919111 -66353540 - B1_Mm SINE Alu 0 147 29 1 805 299 275 10 62 chr17 28919027 28919124 -66353527 - MT2B LTR ERVL -337 264 173 1 805 836 107 56 21 chr17 28919125 28919268 -66353383 + B1_Mus1 SINE Alu 1 148 0 1 805 841 203 94 0 chr17 28919368 28919560 -66353091 + B3 SINE B2 3 212 -4 1 805 374 236 125 12 chr17 28919661 28919772 -66352879 + B1_Mur2 SINE Alu 4 120 0 1 805 566 196 62 0 chr17 28919879 28919991 -66352660 + B3 SINE B2 1 119 -97 1 805 979 74 0 15 chr17 28920051 28920188 -66352463 + B1_Mus2 SINE Alu 1 135 -12 1 805 2471 119 68 29 chr17 28920239 28920653 -66351998 - RLTR23 LTR ERV1 0 430 1 1 805 1155 177 197 20 chr17 28920868 28921085 -66351566 + RLTR15 LTR ERVK 1 271 -88 1 805 1628 26 0 0 chr17 28921085 28921277 -66351374 - B2_Mm1a SINE B2 0 193 2 1 805 1155 177 197 20 chr17 28921277 28921364 -66351287 + RLTR15 LTR ERVK 272 359 0 1 805 1116 75 0 0 chr17 28921471 28921617 -66351034 + B1_Mus1 SINE Alu 2 147 -1 1 805 495 45 0 0 chr17 28921618 28921684 -66350967 + (GAA)n Simple_repeat Simple_repeat 2 67 0 1 805 608 140 9 0 chr17 28921690 28921797 -66350854 + (GAAA)n Simple_repeat Simple_repeat 1 108 0 1 805 823 221 6 6 chr17 28921845 28922013 -66350638 + B3A SINE B2 3 170 -28 1 805 630 240 0 8 chr17 28922013 28922137 -66350514 + B1_Mur2 SINE Alu 1 123 -26 1 805 1036 223 32 186 chr17 28922137 28922643 -66350008 + RLTR11B LTR ERVK 1 428 -25 1 805 21 0 0 0 chr17 28922704 28922725 -66349926 + AT_rich Low_complexity Low_complexity 1 21 0 1 805 588 300 81 33 chr17 28922929 28923201 -66349450 - B4 SINE B4 0 292 8 1 805 585 259 14 7 chr17 28923263 28923403 -66349248 - B4A SINE B4 -149 143 3 1 805 868 258 119 32 chr17 28923693 28924037 -66348614 + MTEb LTR MaLR 1 374 -5 1 805 1030 51 0 0 chr17 28924239 28924376 -66348275 - B1_Mus1 SINE Alu 0 148 12 1 805 973 197 24 15 chr17 28924383 28924589 -66348062 - RMER6A LTR ERVK -2 754 547 1 805 1159 85 40 0 chr17 28924586 28924763 -66347888 - RMER10B LTR ERVL -214 184 1 1 805 782 93 244 18 chr17 28924763 28924829 -66347822 - RMER6A LTR ERVK -561 195 92 1 805 213 39 0 0 chr17 28924829 28924855 -66347796 + (CG)n Simple_repeat Simple_repeat 2 27 0 1 805 782 93 244 18 chr17 28924855 28924946 -66347705 - RMER6A LTR ERVK -665 91 1 1 805 605 260 130 22 chr17 28925014 28925199 -66347452 + B3 SINE B2 1 205 -11 1 805 342 246 258 60 chr17 28925245 28925396 -66347255 - B3A SINE B2 -16 182 2 1 805 737 264 38 5 chr17 28926014 28926223 -66346428 + B3 SINE B2 1 216 0 1 805 1094 62 7 0 chr17 28926306 28926452 -66346199 + B1_Mus1 SINE Alu 2 148 0 1 805 515 58 0 0 chr17 28926454 28926523 -66346128 + B1_Mus1 SINE Alu 1 69 -79 1 805 2563 99 7 66 chr17 28926527 28926603 -66346048 + MT2B2 LTR ERVL 176 239 -345 1 805 1322 62 28 0 chr17 28926603 28926782 -66345869 + B2_Mm1t SINE B2 1 184 -9 1 805 2563 99 7 66 chr17 28926782 28927116 -66345535 + MT2B2 LTR ERVL 240 562 -22 1 805 499 250 138 11 chr17 28927245 28927419 -66345232 + B3A SINE B2 2 197 -1 1 805 1173 54 0 0 chr17 28927539 28927686 -66344965 - B1_Mus1 SINE Alu 0 148 2 1 805 325 211 144 144 chr17 28927695 28927855 -66344796 - B3 SINE B2 0 195 36 1 805 320 108 60 12 chr17 28927874 28927958 -66344693 + (TTTG)n Simple_repeat Simple_repeat 1 88 0 1 805 1147 55 0 7 chr17 28927958 28928105 -66344546 - B1_Mus2 SINE Alu 0 147 2 1 805 945 113 7 28 chr17 28928115 28928260 -66344391 - B1_Mur3 SINE Alu -6 143 2 1 805 25 0 0 0 chr17 28928268 28928293 -66344358 + AT_rich Low_complexity Low_complexity 1 25 0 1 805 225 0 0 0 chr17 28928398 28928423 -66344228 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1 805 1083 71 0 0 chr17 28928426 28928566 -66344085 - B1_Mus1 SINE Alu -7 141 2 1 805 3199 128 59 12 chr17 28928568 28929209 -66343442 + RMER6A LTR ERVK 39 756 0 1 805 477 215 0 11 chr17 28929214 28929308 -66343343 - B3A SINE B2 -68 130 38 1 805 419 18 36 0 chr17 28929384 28929439 -66343212 + (TATG)n Simple_repeat Simple_repeat 2 58 0 1 805 551 319 10 19 chr17 28929928 28930136 -66342515 + ERVL-E-int LTR ERVL 4572 4777 -890 1 805 241 286 97 83 chr17 28930262 28930407 -66342244 - B3 SINE B2 -1 215 69 1 805 516 248 8 8 chr17 28930831 28930949 -66341702 + B1_Mur1 SINE Alu 4 121 -28 1 805 255 103 0 0 chr17 28930986 28931025 -66341626 + (TC)n Simple_repeat Simple_repeat 1 39 0 1 805 614 167 15 45 chr17 28931287 28931432 -66341219 + B1F2 SINE Alu 14 147 -2 1 805 180 0 0 0 chr17 28931458 28931478 -66341173 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 805 506 288 0 36 chr17 28931480 28931617 -66341034 - RSINE1 SINE B4 -33 132 1 1 805 1423 43 16 5 chr17 28931910 28932095 -66340556 - B2_Mm2 SINE B2 -8 187 1 1 805 521 267 17 57 chr17 28932097 28932272 -66340379 - B3A SINE B2 -1 197 30 1 805 422 285 26 13 chr17 28932419 28932572 -66340079 - RSINE1 SINE B4 -10 155 1 1 805 1003 263 82 36 chr17 28932887 28933277 -66339374 + BGLII_B LTR ERVK 7 414 -27 1 805 689 251 134 57 chr17 28933265 28933377 -66339274 - RLTR12B LTR ERVK -81 447 320 1 805 2251 86 3 58 chr17 28933377 28933723 -66338928 - ORR1A2 LTR MaLR 0 327 1 1 805 689 251 134 57 chr17 28933723 28933982 -66338669 - RLTR12B LTR ERVK -209 319 48 1 805 304 263 28 85 chr17 28934312 28934454 -66338197 - B3A SINE B2 0 216 82 1 805 21 0 0 0 chr17 28934850 28934871 -66337780 + AT_rich Low_complexity Low_complexity 1 21 0 1 805 438 267 52 22 chr17 28935073 28935207 -66337444 + RSINE1 SINE B4 2 139 -26 1 805 408 55 0 0 chr17 28935214 28935269 -66337382 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 1 805 582 189 82 0 chr17 28935735 28935857 -66336794 - B1_Mur1 SINE Alu 0 149 18 1 805 230 301 38 19 chr17 28936036 28936141 -66336510 - Arthur1B DNA Tip100 -352 873 767 1 805 24 67 0 0 chr17 28937871 28937916 -66334735 + GC_rich Low_complexity Low_complexity 1 45 0 1 805 239 224 0 17 chr17 28938208 28938267 -66334384 + (CCCG)n Simple_repeat Simple_repeat 2 59 0 1 805 217 193 23 46 chr17 28938313 28938400 -66334251 + G-rich Low_complexity Low_complexity 2 86 0 1 805 442 211 152 36 chr17 28939600 28939738 -66332913 - B3 SINE B2 0 216 63 1 805 28 0 0 0 chr17 28939768 28939796 -66332855 + AT_rich Low_complexity Low_complexity 1 28 0 1 805 445 92 0 30 chr17 28939819 28939886 -66332765 - B3 SINE B2 -145 71 7 1 805 358 238 50 100 chr17 28939894 28940034 -66332617 - B1_Mur1 SINE Alu 0 149 17 1 805 204 303 11 53 chr17 28940218 28940312 -66332339 + MIRb SINE MIR 114 203 -65 1 805 267 31 0 0 chr17 28940785 28940817 -66331834 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1 805 395 196 0 115 chr17 28940821 28940925 -66331726 - PB1D9 SINE Alu -15 105 14 1 805 216 162 0 0 chr17 28941051 28941088 -66331563 + A-rich Low_complexity Low_complexity 2 38 0 1 805 313 213 39 26 chr17 28941088 28941165 -66331486 + B1_Mur2 SINE Alu 63 140 -9 1 805 353 253 22 0 chr17 28941404 28941495 -66331156 + B4A SINE B4 2 94 -198 1 805 1118 156 170 8 chr17 28941640 28941899 -66330752 + RLTR11A LTR ERVK 227 527 -1 1 805 233 219 0 0 chr17 28941970 28942011 -66330640 + B4A SINE B4 235 275 -17 1 805 247 343 38 9 chr17 28942142 28942248 -66330403 - L2a LINE L2 -74 3352 3244 1 805 717 209 0 33 chr17 28942311 28942464 -66330187 - B1_Mus1 SINE Alu 0 148 1 1 805 1183 142 93 0 chr17 28942541 28942745 -66329906 + URR1B DNA MER1_type 1 223 -2 1 805 227 301 0 0 chr17 28944117 28944190 -66328461 + GA-rich Low_complexity Low_complexity 2 74 0 1 805 1235 48 7 0 chr17 28944909 28945056 -66327595 + B1_Mus1 SINE Alu 1 148 0 1 805 264 59 0 0 chr17 28945056 28945090 -66327561 + (A)n Simple_repeat Simple_repeat 1 34 0 1 805 477 319 31 36 chr17 28945120 28945204 -66327447 + ID_B1 SINE B4 2 224 0 1 805 688 250 0 0 chr17 28945204 28945344 -66327307 + B1_Mur1 SINE Alu 9 148 -1 1 805 249 284 19 15 chr17 28945478 28945570 -66327081 - L2a LINE L2 -1 3425 3291 1 805 258 246 0 0 chr17 28945896 28945953 -66326698 + MIRc SINE MIR 74 130 -138 1 805 294 230 40 0 chr17 28945972 28946046 -66326605 + MIRb SINE MIR 184 260 -8 1 805 337 273 71 0 chr17 28946545 28946575 -66326076 - ID_B1 SINE B4 -37 187 82 1 805 446 101 0 0 chr17 28946575 28946644 -66326007 - B1_Mus2 SINE Alu -78 69 1 1 805 283 256 75 32 chr17 28946798 28946891 -66325760 + ID_B1 SINE B4 80 176 -48 1 805 435 217 0 12 chr17 28946817 28946901 -66325750 + PB1D10 SINE Alu 23 105 -12 1 805 1526 238 113 103 chr17 28947875 28947998 -66324653 - RLTR40 LTR ERVK -54 763 621 1 805 468 0 0 0 chr17 28947998 28948050 -66324601 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 805 1526 238 113 103 chr17 28948050 28948200 -66324451 - RLTR40 LTR ERVK -197 620 487 1 805 1062 234 0 0 chr17 28948200 28948409 -66324242 - B3 SINE B2 -6 210 2 1 805 1526 238 113 103 chr17 28948409 28948576 -66324075 - RLTR40 LTR ERVK -331 486 351 1 805 1084 64 43 0 chr17 28948576 28948716 -66323935 - B1_Mus2 SINE Alu 0 147 2 1 805 1526 238 113 103 chr17 28948716 28949013 -66323638 - RLTR40 LTR ERVK -467 350 16 1 805 1251 48 0 0 chr17 28949027 28949174 -66323477 + B1_Mus1 SINE Alu 2 148 0 1 805 309 131 0 0 chr17 28949741 28949802 -66322849 + (TG)n Simple_repeat Simple_repeat 1 61 0 1 805 719 137 35 35 chr17 28950034 28950178 -66322473 + B1_Mur4 SINE Alu 6 149 -1 1 805 325 142 13 20 chr17 28950212 28950321 -66322330 - B2_Mm2 SINE B2 -2 193 47 1 805 1102 85 12 6 chr17 28950387 28950552 -66322099 - B2_Mm1t SINE B2 -14 179 14 1 805 275 252 84 55 chr17 28950787 28950933 -66321718 - B3A SINE B2 0 216 76 1 805 1383 77 39 0 chr17 28950993 28951174 -66321477 - B2_Mm2 SINE B2 -6 189 2 1 805 472 301 91 52 chr17 28952022 28952274 -66320377 + MIR SINE MIR 1 262 0 1 805 180 308 77 0 chr17 28952956 28953021 -66319630 + MIRb SINE MIR 143 212 -56 1 805 270 312 99 23 chr17 28953023 28953154 -66319497 + MIR SINE MIR 2 142 -120 1 805 1208 61 0 0 chr17 28953254 28953401 -66319250 + B1_Mus2 SINE Alu 1 147 0 1 805 333 0 0 0 chr17 28953401 28953438 -66319213 + (A)n Simple_repeat Simple_repeat 1 37 0 1 805 991 71 63 0 chr17 28956759 28956885 -66315766 + B1_Mus2 SINE Alu 1 134 -13 1 805 602 50 0 0 chr17 28956897 28956977 -66315674 - B1_Mus2 SINE Alu 0 147 68 1 805 222 116 0 0 chr17 28956989 28957032 -66315619 + (A)n Simple_repeat Simple_repeat 1 43 0 1 805 397 107 200 0 chr17 28957034 28957109 -66315542 + URR1B DNA MER1_type 110 199 -26 1 805 1234 210 101 52 chr17 28957109 28957455 -66315196 - RMER16 LTR ERVK 0 533 171 1 805 25 51 0 0 chr17 28957463 28957502 -66315149 + AT_rich Low_complexity Low_complexity 1 39 0 1 805 1246 192 16 4 chr17 28957502 28957753 -66314898 - RMER16-int LTR ERVK -6 5400 5147 1 805 221 288 75 0 chr17 28958851 28958931 -66313720 - L2a LINE L2 -1 3425 3340 1 805 338 295 177 8 chr17 28959028 28959288 -66313363 - L2a LINE L2 -208 3218 2915 1 805 317 237 11 11 chr17 28961303 28961403 -66311248 - ID2 SINE ID -49 103 4 1 805 312 340 0 10 chr17 28961413 28961514 -66311137 - B1F2 SINE Alu -47 102 3 1 805 262 330 18 36 chr17 28961527 28961637 -66311014 - PB1D10 SINE Alu -7 110 3 1 805 437 240 19 19 chr17 28962242 28962348 -66310303 + PB1D10 SINE Alu 12 117 0 1 805 552 113 30 40 chr17 28962959 28963060 -66309591 - B1_Mur4 SINE Alu -2 148 49 1 805 220 289 38 76 chr17 28963177 28963282 -66309369 - B1F1 SINE Alu -48 101 1 1 805 302 227 57 98 chr17 28963955 28964077 -66308574 - B1_Mm SINE Alu -2 118 2 1 805 267 227 0 0 chr17 28964251 28964317 -66308334 + CT-rich Low_complexity Low_complexity 3 68 0 1 805 1018 144 0 0 chr17 28964317 28964463 -66308188 - B1_Mus2 SINE Alu 0 147 2 1 805 513 257 100 0 chr17 28964479 28964619 -66308032 - RSINE1 SINE B4 -4 161 8 1 805 922 226 73 50 chr17 28965463 28965832 -66306819 - MTC LTR MaLR 0 419 1 1 100 1184 62 0 7 chr17 28966815 28966961 -66305690 - B1_Mm SINE Alu -2 145 1 1 806 600 285 274 11 chr17 28967837 28968107 -66304544 + MER58B DNA MER1_type 1 341 0 1 806 233 288 61 0 chr17 28969214 28969280 -66303371 - L1M5 LINE L1 -522 5602 5533 1 806 2410 149 26 3 chr17 28969316 28969700 -66302951 - ORR1B1 LTR MaLR 0 394 2 1 806 237 269 90 70 chr17 28969787 28969887 -66302764 + MER5B DNA MER1_type 29 130 -48 1 806 1157 68 0 20 chr17 28970199 28970348 -66302303 + B1_Mus2 SINE Alu 2 147 0 1 806 616 167 118 8 chr17 28970528 28970655 -66301996 + B1_Mur2 SINE Alu 6 146 -3 1 806 1225 34 7 0 chr17 28971292 28971438 -66301213 + B1_Mm SINE Alu 1 147 0 1 806 536 269 17 62 chr17 28971462 28971640 -66301011 - B3 SINE B2 0 216 47 1 806 235 304 0 35 chr17 28975840 28975898 -66296753 - B4A SINE B4 -222 70 15 1 806 201 74 0 0 chr17 28975914 28975941 -66296710 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 1 806 1845 96 91 25 chr17 28975945 28976265 -66296386 - Lx LINE L1 -25 6629 6289 1 806 3666 44 14 0 chr17 28976658 28977086 -66295565 - RLTR10C LTR ERVK 0 436 3 1 806 858 112 80 22 chr17 28977086 28977223 -66295428 + B1_Mus1 SINE Alu 4 148 0 1 806 530 261 18 0 chr17 28977312 28977423 -66295228 - B1F2 SINE Alu -34 115 3 1 806 955 325 52 26 chr17 28977426 28977931 -66294720 - Lx8 LINE L1 -132 7341 6824 1 806 593 266 51 41 chr17 28978005 28978201 -66294450 - Lx8 LINE L1 -782 6691 6494 1 806 325 276 13 157 chr17 28978217 28978376 -66294275 - Lx8 LINE L1 -1093 6380 6245 1 806 339 25 0 0 chr17 28978492 28978532 -66294119 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 806 527 150 100 0 chr17 28978533 28978633 -66294018 - B1_Mus2 SINE Alu -31 116 7 1 806 21 36 0 0 chr17 28978665 28978693 -66293958 + AT_rich Low_complexity Low_complexity 1 28 0 1 806 377 216 108 62 chr17 28978723 28978854 -66293797 + B3 SINE B2 1 147 -46 1 806 1243 72 84 0 chr17 28978867 28979034 -66293617 - B2_Mm2 SINE B2 -14 181 1 1 806 461 186 92 46 chr17 28979163 28979293 -66293358 - ID_B1 SINE B4 -5 219 84 1 806 718 40 5 4 chr17 28979177 28979294 -66293357 - B1_Mus2 SINE Alu -28 121 2 1 806 827 98 0 0 chr17 28979297 28979419 -66293232 - MTB_Mm LTR MaLR -285 122 1 1 806 2697 184 77 160 chr17 28979421 28979748 -66292903 - RMER19B LTR ERVK -52 850 581 1 806 1161 62 7 0 chr17 28979748 28979894 -66292757 + B1_Mus2 SINE Alu 1 147 0 1 806 2697 184 77 160 chr17 28979894 28980493 -66292158 - RMER19B LTR ERVK -322 580 1 1 806 888 231 150 17 chr17 28980655 28980888 -66291763 - ORR1E LTR MaLR -6 353 90 1 806 3332 36 18 0 chr17 28981620 28982009 -66290642 + MTA_Mm LTR MaLR 1 396 0 1 806 489 146 12 0 chr17 28982019 28982101 -66290550 - B2_Mm2 SINE B2 -112 83 1 1 806 225 311 110 7 chr17 28982265 28982401 -66290250 - L1M5 LINE L1 -231 5933 5784 1 806 684 175 0 0 chr17 28982427 28982587 -66290064 + (TG)n Simple_repeat Simple_repeat 2 161 0 1 806 180 77 0 0 chr17 28982655 28982681 -66289970 + (TTTTTA)n Simple_repeat Simple_repeat 1 26 0 1 806 435 170 32 7 chr17 28982927 28983081 -66289570 + (TG)n Simple_repeat Simple_repeat 2 159 0 1 806 254 138 17 0 chr17 28983138 28983196 -66289455 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 806 371 200 35 4 chr17 28983225 28983463 -66289188 + (TG)n Simple_repeat Simple_repeat 1 245 0 1 806 285 269 129 43 chr17 28983491 28983631 -66289020 - RSINE1 SINE B4 -1 164 13 1 806 261 0 0 0 chr17 28983697 28983726 -66288925 + (TCTG)n Simple_repeat Simple_repeat 3 31 0 1 806 246 81 0 0 chr17 28984631 28984668 -66287983 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 806 464 272 58 17 chr17 28984881 28985053 -66287598 + RLTR41 LTR ERV1 268 446 0 1 806 392 304 2 2 chr17 28985478 28985609 -66287042 + MuRRS-int LTR ERV1 754 866 -3824 1 806 280 98 0 0 chr17 28985615 28985656 -66286995 + B2_Mm2 SINE B2 1 41 -154 1 806 1010 46 0 0 chr17 28985654 28985785 -66286866 + B1_Mus1 SINE Alu 18 148 0 1 806 295 268 100 43 chr17 28986735 28986894 -66285757 - MIRb SINE MIR -37 171 4 1 806 368 279 44 31 chr17 28987176 28987335 -66285316 + ID_B1 SINE B4 1 161 -63 1 806 267 239 96 11 chr17 28987264 28987389 -66285262 + B1_Mus1 SINE Alu 8 142 -7 1 806 243 0 0 0 chr17 28987742 28987769 -66284882 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 806 1109 77 0 7 chr17 28987769 28987907 -66284744 - B1_Mus1 SINE Alu -10 138 1 1 806 315 0 0 0 chr17 28987934 28987969 -66284682 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 1 806 1141 103 0 11 chr17 28988000 28988017 -66284634 - B2_Mm2 SINE B2 -20 175 159 1 806 279 0 0 0 chr17 28988017 28988048 -66284603 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1 806 1141 103 0 11 chr17 28988048 28988207 -66284444 - B2_Mm2 SINE B2 -37 158 1 1 806 831 175 228 0 chr17 28988372 28988543 -66284108 - B3 SINE B2 -2 214 5 1 806 853 243 127 0 chr17 28988787 28988976 -66283675 + B3 SINE B2 1 213 -3 1 806 622 252 28 7 chr17 28989019 28989163 -66283488 - B1_Mur1 SINE Alu -2 147 1 1 806 484 304 14 29 chr17 28989191 28989330 -66283321 + RSINE1 SINE B4 11 147 -18 1 806 339 25 0 0 chr17 28989346 28989386 -66283265 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 1 806 1286 27 0 0 chr17 28989426 28989573 -66283078 + B1_Mus2 SINE Alu 1 147 0 1 806 366 23 0 0 chr17 28989756 28989799 -66282852 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 806 209 0 0 88 chr17 28990211 28990245 -66282406 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 806 226 302 177 0 chr17 28990248 28990344 -66282307 - PB1D10 SINE Alu 0 117 5 1 806 820 236 153 19 chr17 28990429 28990723 -66281928 + MTEa LTR MaLR 1 347 -32 1 806 287 217 269 59 chr17 28990965 28991150 -66281501 + RMER2 LTR ERV1 344 567 0 1 806 441 253 0 0 chr17 28991271 28991362 -66281289 + RSINE1 SINE B4 3 93 -72 1 806 650 247 239 0 chr17 28991366 28991613 -66281038 - MTD LTR MaLR -2 417 112 1 806 1064 44 0 0 chr17 28991609 28991745 -66280906 + B1_Mus2 SINE Alu 6 141 -6 1 806 692 98 108 47 chr17 28991796 28991925 -66280726 - B1_Mur3 SINE Alu 0 149 13 1 806 536 235 8 16 chr17 28992083 28992204 -66280447 - PB1D9 SINE Alu 0 120 1 1 806 716 281 102 0 chr17 28992233 28992429 -66280222 - B3 SINE B2 0 216 1 1 806 477 0 0 0 chr17 28993371 28993424 -66279227 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 806 598 239 7 14 chr17 28993694 28993987 -66278664 + GA-rich Low_complexity Low_complexity 1 290 0 1 806 568 253 9 16 chr17 28994282 28994430 -66278221 + B3A SINE B2 9 147 -46 1 806 1288 195 67 64 chr17 28994543 28994714 -66277937 + MTD LTR MaLR 46 209 -210 1 806 1107 98 126 11 chr17 28994714 28994889 -66277762 + B2_Mm2 SINE B2 1 195 0 1 806 1288 195 67 64 chr17 28994889 28995090 -66277561 + MTD LTR MaLR 210 419 0 1 806 405 0 0 0 chr17 28996144 28996189 -66276462 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 806 557 253 141 6 chr17 28997116 28997279 -66275372 - ID_B1 SINE B4 -37 187 3 1 806 822 100 8 0 chr17 28997328 28997448 -66275203 + B1_Mur4 SINE Alu 24 144 -6 1 806 261 267 16 101 chr17 28997346 28997475 -66275176 + RLTR25B LTR ERVK 442 559 -469 1 806 406 314 84 16 chr17 28997718 28997909 -66274742 - MIR SINE MIR -29 233 30 1 806 392 236 0 113 chr17 28998045 28998169 -66274482 + MT2B LTR ERVL 155 264 -337 1 806 786 182 7 14 chr17 28998060 28998205 -66274446 + B1_Mur3 SINE Alu 6 149 0 1 806 521 30 15 0 chr17 28998227 28998294 -66274357 + (TA)n Simple_repeat Simple_repeat 1 68 0 1 806 418 193 11 33 chr17 28998700 28998882 -66273769 + (TG)n Simple_repeat Simple_repeat 1 178 0 1 806 667 273 45 35 chr17 28998882 28999083 -66273568 - B4 SINE B4 0 292 90 1 806 333 0 0 0 chr17 28999090 28999127 -66273524 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1 806 1254 21 0 0 chr17 28999129 28999269 -66273382 - B1_Mm SINE Alu -6 141 2 1 806 233 191 32 0 chr17 28999272 28999335 -66273316 - B3 SINE B2 0 216 152 1 806 207 162 0 0 chr17 28999335 28999372 -66273279 + CT-rich Low_complexity Low_complexity 2 38 0 1 806 354 141 93 12 chr17 28999547 28999633 -66273018 - PB1D7 SINE Alu -1 119 27 1 806 334 263 31 21 chr17 28999891 28999988 -66272663 - RSINE1 SINE B4 0 165 68 1 806 324 257 0 0 chr17 29000571 29000641 -66272010 - RSINE1 SINE B4 -90 75 6 1 806 668 215 37 31 chr17 29001019 29001182 -66271469 - RSINE1 SINE B4 0 165 2 2 806 409 268 71 0 chr17 29001331 29001443 -66271208 - ID_B1 SINE B4 -20 204 85 3 806 389 193 165 0 chr17 29002081 29002190 -66270461 + B1F SINE Alu 14 140 -9 4 806 390 269 19 37 chr17 29002093 29002201 -66270450 + ID_B1 SINE B4 117 222 -2 5 806 1708 222 73 6 chr17 29002245 29002739 -66269912 - RLTR11A2 LTR ERVK 0 527 1 6 806 261 0 0 0 chr17 29002887 29002916 -66269735 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 7 806 638 256 146 43 chr17 29002922 29003367 -66269284 - L1MB8 LINE L1 -8 6170 5680 8 806 243 0 0 0 chr17 29003382 29003409 -66269242 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 806 459 308 79 58 chr17 29003871 29004112 -66268539 - MLT1J LTR MaLR -240 272 27 1 806 286 258 16 0 chr17 29004147 29004209 -66268442 + ID4_ SINE ID 20 82 -1 1 806 650 217 14 7 chr17 29005155 29005294 -66267357 - B1F SINE Alu 0 149 10 1 806 204 122 0 0 chr17 29005311 29005352 -66267299 + (T)n Simple_repeat Simple_repeat 1 41 0 1 806 1155 50 0 0 chr17 29005365 29005505 -66267146 + B1_Mus1 SINE Alu 2 141 -7 1 806 207 304 0 0 chr17 29005541 29005620 -66267031 + (TG)n Simple_repeat Simple_repeat 2 80 0 1 806 416 269 0 6 chr17 29005684 29005860 -66266791 + (CCCA)n Simple_repeat Simple_repeat 3 177 0 1 806 306 333 27 9 chr17 29006133 29006245 -66266406 - B4 SINE B4 -172 120 7 1 806 204 40 0 0 chr17 29006923 29006948 -66265703 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 806 1088 202 14 5 chr17 29007497 29007711 -66264940 - B3 SINE B2 0 216 1 1 806 791 212 79 0 chr17 29007883 29008086 -66264565 - ID_B1 SINE B4 -5 219 1 2 806 1155 48 0 20 chr17 29008125 29008274 -66264377 + B1_Mus2 SINE Alu 1 146 -1 2 806 785 181 0 0 chr17 29008299 29008426 -66264225 + B1_Mus2 SINE Alu 2 128 -19 2 806 183 156 0 0 chr17 29008443 29008475 -66264176 + (TATATG)n Simple_repeat Simple_repeat 3 34 0 2 806 473 265 79 79 chr17 29008477 29008641 -66264010 - RSINE1 SINE B4 0 165 2 2 806 311 273 81 0 chr17 29008961 29009060 -66263591 + ID_B1 SINE B4 110 216 -8 2 806 306 0 0 0 chr17 29009294 29009328 -66263323 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 806 946 256 131 16 chr17 29009492 29009813 -66262838 - MTE2b LTR MaLR -21 358 1 2 806 456 121 0 91 chr17 29009877 29010031 -66262620 + CT-rich Low_complexity Low_complexity 1 140 0 2 806 411 291 28 69 chr17 29010036 29010099 -66262552 - B1F2 SINE Alu -2 147 88 2 806 4207 116 63 11 chr17 29010099 29010814 -66261837 - RMER6A LTR ERVK -4 752 1 3 806 411 291 28 69 chr17 29010814 29010894 -66261757 - B1F2 SINE Alu -62 87 10 2 806 198 173 40 0 chr17 29010982 29011057 -66261594 + GA-rich Low_complexity Low_complexity 1 78 0 3 806 378 0 0 0 chr17 29011288 29011330 -66261321 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 806 1196 42 0 0 chr17 29011616 29011760 -66260891 - B1_Mm SINE Alu -2 145 2 3 806 546 288 0 0 chr17 29011786 29011911 -66260740 + ID_B1 SINE B4 92 216 -8 3 806 224 172 85 17 chr17 29012202 29012261 -66260390 + MIRm SINE MIR 81 143 -133 3 806 188 230 0 12 chr17 29012351 29012409 -66260242 + MIRm SINE MIR 67 128 -148 3 806 188 366 43 26 chr17 29012496 29012611 -66260040 - L3 LINE CR1 -89 4400 4284 3 806 239 309 11 80 chr17 29012630 29012718 -66259933 + ID4_ SINE ID 2 83 0 3 806 654 271 119 0 chr17 29012728 29012905 -66259746 + B3A SINE B2 1 198 0 3 806 1526 21 0 41 chr17 29012925 29013121 -66259530 + B2_Mm1a SINE B2 2 189 -4 4 806 539 291 39 6 chr17 29013143 29013323 -66259328 + ID_B1 SINE B4 15 200 -24 4 806 617 12 0 12 chr17 29014720 29014806 -66257845 + L1Md_T LINE L1 6498 6582 0 4 806 1110 199 18 5 chr17 29015635 29015852 -66256799 + ID_B1 SINE B4 2 221 -3 4 806 312 313 130 0 chr17 29015946 29016061 -66256590 - MIRb SINE MIR -80 188 59 4 806 1127 81 0 0 chr17 29016596 29016744 -66255907 - B1_Mus1 SINE Alu 0 148 1 4 806 822 234 22 71 chr17 29017408 29017633 -66255018 + ID_B1 SINE B4 1 214 -10 4 806 183 42 0 0 chr17 29017633 29017657 -66254994 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 4 806 403 269 127 33 chr17 29018707 29018888 -66253763 + B3A SINE B2 1 198 0 4 806 30 27 0 0 chr17 29018903 29018940 -66253711 + AT_rich Low_complexity Low_complexity 1 37 0 4 806 521 296 16 0 chr17 29019012 29019137 -66253514 + B4 SINE B4 46 172 -120 5 806 622 157 24 24 chr17 29019163 29019287 -66253364 + B1_Mur3 SINE Alu 26 149 0 5 806 560 240 13 46 chr17 29019749 29019902 -66252749 + B1_Mur3 SINE Alu 2 149 0 5 806 377 272 46 39 chr17 29019902 29020023 -66252628 - B3 SINE B2 -9 207 86 5 806 608 147 0 35 chr17 29020020 29020133 -66252518 + B1_Mus1 SINE Alu 34 142 -6 5 806 210 128 0 0 chr17 29020138 29020177 -66252474 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 5 806 565 229 20 41 chr17 29020177 29020323 -66252328 - B1_Mur1 SINE Alu -5 144 2 5 806 884 274 16 31 chr17 29020892 29021148 -66251503 + MTE2a LTR MaLR 126 377 -2 5 806 282 246 16 0 chr17 29021248 29021309 -66251342 + LTR33A LTR ERVL 71 132 -388 5 806 296 304 33 0 chr17 29021410 29021502 -66251149 - PB1D10 SINE Alu -18 99 5 5 806 665 268 38 38 chr17 29021613 29021799 -66250852 + B3A SINE B2 9 194 -4 6 806 1369 78 5 0 chr17 29021805 29021996 -66250655 + B2_Mm2 SINE B2 2 193 -2 6 806 1176 15 0 0 chr17 29021998 29022135 -66250516 + B1_Mus2 SINE Alu 1 137 -10 6 806 279 0 0 0 chr17 29022135 29022166 -66250485 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 6 806 180 243 0 0 chr17 29022649 29022686 -66249965 + MIR SINE MIR 112 148 -60 6 806 366 162 149 0 chr17 29022815 29022889 -66249762 - B1_Mur4 SINE Alu 0 150 66 6 806 441 312 8 16 chr17 29022859 29022986 -66249665 - ID_B1 SINE B4 -23 201 76 6 806 1194 101 6 11 chr17 29023059 29023081 -66249570 - B2_Mm1a SINE B2 -13 180 159 6 806 477 0 0 0 chr17 29023081 29023134 -66249517 + (TTTA)n Simple_repeat Simple_repeat 4 56 0 6 806 1194 101 6 11 chr17 29023134 29023292 -66249359 - B2_Mm1a SINE B2 -35 158 1 6 806 265 259 137 8 chr17 29023329 29023446 -66249205 - RSINE1 SINE B4 -2 163 32 6 806 466 239 0 26 chr17 29024044 29024160 -66248491 + PB1D9 SINE Alu 1 113 -7 7 806 1179 88 55 6 chr17 29024171 29024353 -66248298 + B2_Mm1t SINE B2 1 191 -2 7 806 410 152 38 12 chr17 29024353 29024425 -66248226 + URR1B DNA MER1_type 150 224 -1 7 806 707 197 20 20 chr17 29024441 29024591 -66248060 + B1_Mur4 SINE Alu 1 150 0 7 806 876 35 9 0 chr17 29024594 29024709 -66247942 + B1_Mus1 SINE Alu 33 148 0 7 806 591 135 0 0 chr17 29024715 29024811 -66247840 + (GA)n Simple_repeat Simple_repeat 2 97 0 7 806 1296 162 157 27 chr17 29025625 29025994 -66246657 - RMER10A LTR ERVL 0 442 26 7 806 255 269 30 0 chr17 29026475 29026542 -66246109 - MER53 DNA hAT -1 192 124 7 806 584 110 245 31 chr17 29026597 29026756 -66245895 - RLTR9A LTR ERVK 0 368 176 7 806 3267 136 14 9 chr17 29026770 29027320 -66245331 + RLTR1D LTR ERV1 37 589 -16 7 806 753 129 122 7 chr17 29027339 29027487 -66245164 - RLTR9A LTR ERVK -198 170 6 7 806 1195 48 0 0 chr17 29027564 29027711 -66244940 - B1_Mm SINE Alu 0 147 1 8 806 727 215 0 20 chr17 29027722 29027874 -66244777 - B1_Mur1 SINE Alu 0 149 1 8 806 1649 172 30 145 chr17 29027934 29028012 -66244639 + RLTR23 LTR ERV1 1 75 -355 8 806 3535 39 9 0 chr17 29028012 29028444 -66244207 - RLTR10C LTR ERVK 0 436 1 8 806 1649 172 30 145 chr17 29028444 29028833 -66243818 + RLTR23 LTR ERV1 76 413 -17 8 806 2349 80 0 0 chr17 29028838 29029149 -66243502 - RLTR10E LTR ERVK 0 311 1 8 806 1805 230 12 7 chr17 29029238 29029649 -66243002 - IAPEY3-int LTR ERVK -273 7407 6995 8 806 1355 92 142 0 chr17 29029653 29029871 -66242780 - IAP-d-int LTR ERVK -1287 5255 5007 8 806 413 162 0 0 chr17 29029871 29029939 -66242712 - IAP-d-int LTR ERVK -6039 503 436 8 806 427 71 0 0 chr17 29029966 29030022 -66242629 - IAP-d-int LTR ERVK -6365 177 122 8 806 1863 55 0 128 chr17 29030041 29030376 -66242275 - RLTR10B LTR ERVK 0 292 1 8 806 6016 240 31 14 chr17 29030402 29031938 -66240713 - MMERVK10C-int LTR ERVK -5360 2221 660 8 806 525 292 0 0 chr17 29031935 29032082 -66240569 - MMERVK10C-int LTR ERVK -7157 424 278 8 806 639 75 21 0 chr17 29032082 29032175 -66240476 - MMERVK10C-int LTR ERVK -7486 95 1 8 806 2254 62 23 0 chr17 29032175 29032479 -66240172 - RLTR10E LTR ERVK 0 311 1 8 806 784 244 103 48 chr17 29032520 29032898 -66239753 + RMER10A LTR ERVL 1 399 -43 8 806 322 230 208 19 chr17 29033494 29033635 -66239016 + B3A SINE B2 56 210 -6 9 806 669 171 40 16 chr17 29033750 29033875 -66238776 + B3 SINE B2 1 128 -88 9 806 243 0 0 0 chr17 29033899 29033926 -66238725 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 806 21 0 0 0 chr17 29034067 29034088 -66238563 + AT_rich Low_complexity Low_complexity 1 21 0 9 806 2595 103 25 12 chr17 29034457 29034859 -66237792 - MTB_Mm LTR MaLR 0 407 1 9 806 325 277 53 9 chr17 29034993 29035106 -66237545 + PB1D7 SINE Alu 3 120 0 9 806 240 148 0 129 chr17 29035111 29035173 -66237478 + B1_Mur4 SINE Alu 1 54 -96 9 806 360 260 224 13 chr17 29035261 29035413 -66237238 + B4 SINE B4 90 273 -19 9 806 222 171 0 0 chr17 29035440 29035481 -66237170 + (CAGG)n Simple_repeat Simple_repeat 2 42 0 9 806 422 268 134 0 chr17 29036226 29036368 -66236283 + RSINE1 SINE B4 2 162 -3 9 806 342 61 0 0 chr17 29037415 29037464 -66235187 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 806 306 0 0 0 chr17 29037474 29037508 -66235143 + (GA)n Simple_repeat Simple_repeat 1 34 0 1 806 597 275 114 30 chr17 29037554 29037790 -66234861 - B4A SINE B4 -6 286 31 1 806 291 122 281 0 chr17 29037944 29038026 -66234625 - MIRc SINE MIR -116 152 48 1 806 1051 117 30 60 chr17 29038583 29038784 -66233867 + B2_Mm2 SINE B2 1 195 0 1 806 750 111 0 8 chr17 29039454 29039572 -66233079 - B1_Mur4 SINE Alu -31 119 3 1 806 311 204 0 142 chr17 29039468 29039588 -66233063 - MT2B LTR ERVL -344 257 155 1 806 1404 73 16 0 chr17 29040490 29040682 -66231969 + B2_Mm2 SINE B2 1 195 0 1 806 1420 67 0 25 chr17 29040691 29040891 -66231760 + B2_Mm2 SINE B2 1 195 0 1 806 1142 48 0 14 chr17 29040893 29041040 -66231611 + B1_Mus1 SINE Alu 3 147 -1 1 806 612 238 8 8 chr17 29042960 29043091 -66229560 - RSINE1 SINE B4 -32 133 3 1 806 229 124 34 81 chr17 29043963 29044091 -66228560 + (TAGA)n Simple_repeat Simple_repeat 4 126 0 1 806 396 59 0 0 chr17 29044091 29044142 -66228509 + (TGGA)n Simple_repeat Simple_repeat 4 54 0 1 806 925 63 28 37 chr17 29044144 29044342 -66228309 + (TAGA)n Simple_repeat Simple_repeat 1 196 0 1 806 655 206 44 153 chr17 29044342 29044504 -66228147 - ID_B1 SINE B4 -13 211 59 1 806 1394 63 26 0 chr17 29044504 29044694 -66227957 - B2_Mm2 SINE B2 0 195 1 1 806 655 206 44 153 chr17 29044694 29044760 -66227891 - ID SINE ID -166 58 8 1 806 1096 76 7 0 chr17 29044806 29044951 -66227700 + B1_Mm SINE Alu 2 147 0 1 806 261 83 0 0 chr17 29044951 29044987 -66227664 + (A)n Simple_repeat Simple_repeat 1 36 0 1 806 186 43 0 0 chr17 29045643 29045666 -66226985 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1 806 654 204 66 0 chr17 29045666 29045793 -66226858 - B1_Mm SINE Alu -9 138 3 1 806 612 0 0 0 chr17 29045974 29046042 -66226609 + (TC)n Simple_repeat Simple_repeat 1 68 0 1 806 279 173 65 26 chr17 29047417 29047494 -66225157 - PB1D10 SINE Alu -1 116 37 1 806 265 324 17 109 chr17 29047494 29047656 -66224995 - ID_B1 SINE B4 0 224 8 1 806 640 171 115 8 chr17 29047742 29047872 -66224779 - B1_Mur2 SINE Alu 0 149 6 1 806 243 163 61 0 chr17 29047938 29047987 -66224664 - B3A SINE B2 -77 121 70 1 806 432 0 0 0 chr17 29047990 29048038 -66224613 + (TAAA)n Simple_repeat Simple_repeat 3 50 0 1 806 451 240 165 25 chr17 29048056 29048214 -66224437 + B3A SINE B2 2 181 -17 1 806 225 292 10 20 chr17 29048223 29048321 -66224330 + (CATATA)n Simple_repeat Simple_repeat 6 102 0 1 806 327 184 11 51 chr17 29048329 29048506 -66224145 + (CA)n Simple_repeat Simple_repeat 2 171 0 1 806 764 218 7 0 chr17 29048652 29048794 -66223857 + RSINE1 SINE B4 3 145 -20 1 806 451 0 34 0 chr17 29048796 29048855 -66223796 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 806 396 0 0 0 chr17 29050503 29050547 -66222104 + (TC)n Simple_repeat Simple_repeat 1 44 0 1 806 893 147 0 4 chr17 29050547 29050793 -66221858 + (CA)n Simple_repeat Simple_repeat 1 244 0 1 806 324 0 0 0 chr17 29051193 29051229 -66221422 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 806 240 149 0 0 chr17 29051622 29051669 -66220982 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 806 534 139 55 0 chr17 29051686 29051851 -66220800 + (TG)n Simple_repeat Simple_repeat 1 174 0 1 806 261 0 0 0 chr17 29052596 29052625 -66220026 + (A)n Simple_repeat Simple_repeat 1 29 0 1 806 224 59 29 0 chr17 29052688 29052722 -66219929 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 806 889 226 92 0 chr17 29052801 29052996 -66219655 + B3 SINE B2 1 213 -3 1 806 1139 79 90 0 chr17 29053057 29053234 -66219417 - B2_Mm2 SINE B2 -2 193 1 1 806 520 219 53 0 chr17 29053241 29053355 -66219296 + B1_Mur1 SINE Alu 18 137 -12 1 806 674 237 0 14 chr17 29053871 29054012 -66218639 + ID_B1 SINE B4 86 224 0 1 806 21 36 0 0 chr17 29054182 29054210 -66218441 + AT_rich Low_complexity Low_complexity 1 28 0 1 806 745 246 64 0 chr17 29054332 29054535 -66218116 + B3 SINE B2 1 216 0 1 806 315 327 38 9 chr17 29054594 29054699 -66217952 + PB1D10 SINE Alu 2 109 -8 1 806 339 188 161 23 chr17 29054729 29054816 -66217835 + PB1D9 SINE Alu 20 118 -2 1 806 929 174 66 52 chr17 29054952 29055046 -66217605 - RMER17C LTR ERVK 0 410 327 1 806 3263 66 59 79 chr17 29055046 29055142 -66217509 + MURVY-LTR LTR ERV1 1 94 -425 1 806 1128 62 14 0 chr17 29055142 29055288 -66217363 + B1_Mus1 SINE Alu 1 148 0 1 806 3263 66 59 79 chr17 29055288 29055720 -66216931 + MURVY-LTR LTR ERV1 95 518 -1 1 806 929 174 66 52 chr17 29055720 29055831 -66216820 - RMER17C LTR ERVK -84 326 214 1 806 180 0 0 0 chr17 29055831 29055851 -66216800 + (GA)n Simple_repeat Simple_repeat 2 21 0 1 806 929 174 66 52 chr17 29055851 29055916 -66216735 - RMER17C LTR ERVK -197 213 136 1 806 522 40 0 50 chr17 29056058 29056129 -66216522 + B1_Mur4 SINE Alu 75 144 -6 1 806 255 31 0 0 chr17 29056129 29056161 -66216490 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 1 806 1149 109 109 0 chr17 29056184 29056358 -66216293 + B2_Mm2 SINE B2 1 193 -2 1 806 21 0 0 0 chr17 29056930 29056951 -66215700 + AT_rich Low_complexity Low_complexity 1 21 0 1 806 642 123 19 27 chr17 29056951 29057080 -66215571 - B1F2 SINE Alu 0 149 10 1 806 279 275 78 106 chr17 29056980 29057159 -66215492 - MT2B2 LTR ERVL -306 278 105 1 806 614 295 47 54 chr17 29057221 29057497 -66215154 + B4 SINE B4 1 274 -18 1 806 691 182 0 14 chr17 29057530 29057749 -66214902 + (CA)n Simple_repeat Simple_repeat 1 215 0 1 806 569 244 16 56 chr17 29057766 29057892 -66214759 + ID_B1 SINE B4 82 202 -22 1 806 370 202 51 0 chr17 29058426 29058505 -66214146 - ID_B1 SINE B4 -1 223 141 1 806 291 300 55 55 chr17 29058505 29058553 -66214098 - B1F SINE Alu -1 148 22 1 806 231 36 0 0 chr17 29058740 29058768 -66213883 + (TCC)n Simple_repeat Simple_repeat 3 30 0 1 806 1232 41 7 0 chr17 29058770 29058916 -66213735 - B1_Mus1 SINE Alu 0 148 2 1 806 468 0 0 0 chr17 29058971 29059023 -66213628 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 806 195 100 0 0 chr17 29059034 29059064 -66213587 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1 806 266 313 0 0 chr17 29059146 29059213 -66213438 - ID_B1 SINE B4 -125 99 33 1 806 452 189 242 0 chr17 29059454 29059549 -66213102 - PB1D7 SINE Alu -2 118 1 1 806 1584 158 54 90 chr17 29060672 29061095 -66211556 + RMER17C LTR ERVK 1 408 -2 1 806 1120 119 0 54 chr17 29061071 29061097 -66211554 - B2_Mm2 SINE B2 -19 176 159 1 806 186 43 0 0 chr17 29061097 29061120 -66211531 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 1 806 1120 119 0 54 chr17 29061120 29061279 -66211372 - B2_Mm2 SINE B2 -37 158 1 1 806 436 286 11 6 chr17 29061862 29062026 -66210625 - ID_B1 SINE B4 -27 197 2 1 806 288 247 64 53 chr17 29062654 29062748 -66209903 - B1F SINE Alu -33 116 22 1 806 396 213 94 21 chr17 29063182 29063278 -66209373 - PB1D10 SINE Alu -6 143 31 1 806 335 152 212 0 chr17 29063639 29063705 -66208946 - MTC LTR MaLR -164 257 178 1 806 1152 69 7 0 chr17 29063740 29063885 -66208766 + B1_Mus2 SINE Alu 1 146 -1 1 806 191 218 0 18 chr17 29064095 29064151 -66208500 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 806 528 285 22 14 chr17 29064172 29064311 -66208340 + B1_Mur1 SINE Alu 9 148 -1 1 806 321 307 153 24 chr17 29064315 29064485 -66208166 + B3A SINE B2 2 193 -5 1 806 304 220 253 0 chr17 29064580 29064671 -66207980 - RSINE1 SINE B4 -50 115 2 1 806 340 262 62 0 chr17 29064701 29064781 -66207870 - B1F SINE Alu -64 85 1 1 806 396 59 0 0 chr17 29064924 29064975 -66207676 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 806 387 255 139 30 chr17 29065460 29065626 -66207025 - B3A SINE B2 -14 184 1 1 806 332 246 15 0 chr17 29065627 29065692 -66206959 - ID_B1 SINE B4 0 224 159 1 806 356 252 150 8 chr17 29065823 29065943 -66206708 - RSINE1 SINE B4 -17 148 12 1 806 803 203 0 39 chr17 29065961 29066115 -66206536 - B1_Mur1 SINE Alu 0 149 2 1 806 1163 62 0 40 chr17 29066143 29066294 -66206357 - B1_Mus2 SINE Alu -1 146 2 1 806 458 232 175 31 chr17 29066438 29066598 -66206053 + B3A SINE B2 1 183 -15 1 806 1072 63 42 7 chr17 29066630 29066773 -66205878 + B1_Mus1 SINE Alu 1 148 0 1 806 1439 73 15 30 chr17 29066985 29067183 -66205468 - B2_Mm2 SINE B2 0 195 1 1 806 303 288 213 14 chr17 29067614 29067755 -66204896 - ID_B1 SINE B4 -55 169 1 1 806 1521 68 16 0 chr17 29068132 29068323 -66204328 - B2_Mm2 SINE B2 0 195 2 1 806 586 267 77 24 chr17 29068603 29068772 -66203879 + B3A SINE B2 1 178 -20 1 806 507 69 0 0 chr17 29069177 29069249 -66203402 + (TTTC)n Simple_repeat Simple_repeat 2 73 0 1 806 551 256 47 35 chr17 29069787 29069957 -66202694 + MER2 DNA MER2_type 119 290 -55 1 806 504 143 0 0 chr17 29069970 29070054 -66202597 + (TA)n Simple_repeat Simple_repeat 2 85 0 1 806 893 140 91 40 chr17 29070162 29070397 -66202254 - B2_Mm2 SINE B2 -6 210 1 1 806 22 0 0 0 chr17 29070400 29070422 -66202229 + AT_rich Low_complexity Low_complexity 1 22 0 1 806 1285 14 7 0 chr17 29070428 29070573 -66202078 - B1_Mm SINE Alu 0 147 2 1 806 468 86 0 0 chr17 29070613 29070683 -66201968 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 806 500 214 41 0 chr17 29070713 29070811 -66201840 - RSINE1 SINE B4 -61 104 3 1 806 457 186 133 0 chr17 29071793 29071906 -66200745 + RSINE1 SINE B4 2 129 -36 1 806 1183 88 0 0 chr17 29071969 29072117 -66200534 + B1_Mus1 SINE Alu 1 148 0 1 806 1030 109 77 24 chr17 29072147 29072316 -66200335 + B2_Mm2 SINE B2 1 178 -17 2 806 372 43 0 0 chr17 29072549 29072595 -66200056 + (GGGGA)n Simple_repeat Simple_repeat 1 46 0 2 806 234 310 69 0 chr17 29072698 29072785 -66199866 + B1F1 SINE Alu 2 94 -55 2 806 592 127 137 93 chr17 29072815 29072954 -66199697 + B1_Mus2 SINE Alu 1 145 -2 2 806 348 197 16 0 chr17 29072977 29073038 -66199613 + ID4_ SINE ID 9 70 -13 2 806 375 258 100 15 chr17 29073125 29073255 -66199396 - B1F2 SINE Alu 0 149 9 2 806 203 289 83 34 chr17 29073258 29073366 -66199285 + L2b LINE L2 2946 3056 -319 2 806 438 246 141 141 chr17 29073454 29073667 -66198984 - B3 SINE B2 -3 213 1 2 806 849 189 94 0 chr17 29073669 29073849 -66198802 - B3 SINE B2 -19 197 1 2 806 222 284 184 63 chr17 29073864 29074022 -66198629 + L2b LINE L2 3173 3349 -26 2 806 2614 78 69 18 chr17 29074352 29074743 -66197908 + IAPLTR2a LTR ERVK 1 411 0 2 806 1033 110 25 85 chr17 29074744 29074943 -66197708 + IAPEz-int LTR ERVK 9 195 -6286 2 806 242 321 0 0 chr17 29074943 29074996 -66197655 + RLTR27 LTR ERVK 223 275 -34 2 806 3200 69 22 16 chr17 29074996 29075562 -66197089 + IAPEz-int LTR ERVK 168 662 -5819 2 806 2604 70 0 3 chr17 29075562 29075905 -66196746 + IAPEz-int LTR ERVK 1359 1700 -4781 2 806 6630 36 10 6 chr17 29075898 29076724 -66195927 + IAPEz-int LTR ERVK 5651 6479 -2 2 806 2610 92 50 25 chr17 29076726 29077127 -66195524 + IAPLTR2a LTR ERVK 1 411 0 2 806 1368 52 28 17 chr17 29077484 29077661 -66194990 + B2_Mm2 SINE B2 2 180 -15 2 806 1157 69 7 0 chr17 29077680 29077825 -66194826 - B1_Mus2 SINE Alu 0 147 2 2 806 642 139 117 22 chr17 29078559 29078705 -66193946 - B1_Mus1 SINE Alu 0 149 1 2 806 1074 167 34 43 chr17 29078808 29079015 -66193636 + B3 SINE B2 1 205 -11 2 806 259 222 0 0 chr17 29079286 29079340 -66193311 + CT-rich Low_complexity Low_complexity 1 54 0 2 806 198 182 0 0 chr17 29079377 29079407 -66193244 + T-rich Low_complexity Low_complexity 15 44 0 2 806 1310 27 0 0 chr17 29079407 29079554 -66193097 - B1_Mm SINE Alu 0 147 1 2 806 198 182 0 0 chr17 29079554 29079567 -66193084 + T-rich Low_complexity Low_complexity 2 14 0 2 806 235 186 23 0 chr17 29079619 29079662 -66192989 - B3A SINE B2 -92 106 63 2 806 931 86 7 21 chr17 29079687 29079829 -66192822 - B1_Mur3 SINE Alu -1 148 9 2 806 555 292 35 57 chr17 29079688 29079917 -66192734 - ID_B1 SINE B4 0 224 1 2 806 592 254 29 7 chr17 29079951 29080090 -66192561 + B1_Mur2 SINE Alu 2 143 -6 2 806 29 0 0 0 chr17 29080094 29080123 -66192528 + AT_rich Low_complexity Low_complexity 1 29 0 2 806 1099 97 14 0 chr17 29080273 29080418 -66192233 + B1_Mus1 SINE Alu 1 147 -1 2 806 763 221 48 30 chr17 29080447 29080615 -66192036 - B3A SINE B2 -24 174 4 2 806 1165 56 14 0 chr17 29081020 29081163 -66191488 - B1_Mm SINE Alu 0 147 3 2 806 555 258 109 31 chr17 29081203 29081395 -66191256 - B3 SINE B2 -6 210 4 2 806 23 0 0 0 chr17 29081492 29081515 -66191136 + AT_rich Low_complexity Low_complexity 1 23 0 2 806 252 291 186 8 chr17 29081569 29081687 -66190964 + RSINE1 SINE B4 4 142 -23 2 806 300 102 82 0 chr17 29081682 29081731 -66190920 - B1_Mur3 SINE Alu -51 98 46 2 806 5473 129 62 58 chr17 29081764 29082398 -66190253 - Lx LINE L1 -1 6653 5995 2 806 1114 74 0 0 chr17 29082398 29082533 -66190118 + B1_Mus2 SINE Alu 2 136 -11 2 806 216 0 0 0 chr17 29082536 29082560 -66190091 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 806 5473 130 62 53 chr17 29082560 29083019 -66189632 - Lx LINE L1 -660 5994 5539 2 806 1146 78 0 0 chr17 29083038 29083180 -66189471 - B1_Mus1 SINE Alu -6 142 1 2 806 732 295 121 28 chr17 29083200 29083489 -66189162 - MTEb LTR MaLR -61 318 3 2 806 225 231 58 0 chr17 29084391 29084443 -66188208 - ID_B1 SINE B4 -7 217 163 2 806 1313 163 14 5 chr17 29084567 29084777 -66187874 + B3 SINE B2 1 212 -4 2 806 207 0 0 0 chr17 29084792 29084815 -66187836 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 2 806 1156 122 44 6 chr17 29084922 29085103 -66187548 + B2_Mm2 SINE B2 1 188 -7 2 806 285 215 35 0 chr17 29085355 29085420 -66187231 - B3 SINE B2 -127 68 2 2 806 577 256 15 8 chr17 29085444 29085578 -66187073 - B1_Mur2 SINE Alu -14 135 1 2 806 421 292 21 0 chr17 29085585 29085681 -66186970 - PB1D7 SINE Alu -6 114 17 2 806 477 266 49 35 chr17 29085789 29085933 -66186718 + RSINE1 SINE B4 1 146 -19 2 806 1671 26 16 0 chr17 29086042 29086233 -66186418 - B2_Mm2 SINE B2 -1 194 1 2 806 442 267 59 17 chr17 29086284 29086402 -66186249 - RSINE1 SINE B4 -39 126 4 2 806 575 198 0 11 chr17 29086417 29086538 -66186113 - B1_Mur4 SINE Alu 0 120 2 2 806 1659 26 5 0 chr17 29086554 29086745 -66185906 - B2_Mm1t SINE B2 0 193 2 2 806 409 271 154 33 chr17 29086774 29086926 -66185725 - B4A SINE B4 -105 187 23 2 806 513 299 7 7 chr17 29086926 29087061 -66185590 + B1F1 SINE Alu 2 136 -13 2 806 202 340 89 25 chr17 29087124 29087281 -66185370 + MIRb SINE MIR 26 192 -76 2 806 690 72 10 0 chr17 29087513 29087610 -66185041 - B1_Mus2 SINE Alu -1 146 49 2 806 414 113 0 27 chr17 29088069 29088142 -66184509 - B1_Mur4 SINE Alu 0 150 80 2 806 357 212 0 0 chr17 29088255 29088321 -66184330 - ID_B1 SINE B4 -63 161 96 2 806 426 267 76 0 chr17 29088394 29088499 -66184152 + ID_B1 SINE B4 107 219 -5 2 806 512 296 30 24 chr17 29088506 29088588 -66184063 + ID SINE ID 1 83 -141 2 806 236 298 83 37 chr17 29088588 29088696 -66183955 + PB1D10 SINE Alu 4 116 -1 2 806 24 32 0 0 chr17 29089332 29089363 -66183288 + GC_rich Low_complexity Low_complexity 1 31 0 2 806 298 203 15 30 chr17 29091283 29091349 -66181302 + ID4 SINE ID 3 67 -16 2 806 647 180 16 8 chr17 29091914 29092037 -66180614 - B3 SINE B2 -82 134 11 2 806 318 263 20 119 chr17 29092044 29092154 -66180497 - L1MC LINE L1 -2867 3279 3176 2 806 1229 68 0 0 chr17 29092154 29092301 -66180350 - B1_Mus2 SINE Alu 0 147 1 2 806 318 263 20 119 chr17 29092301 29092341 -66180310 - L1MC LINE L1 -2971 3175 3144 2 806 395 241 190 0 chr17 29092359 29092475 -66180176 - RSINE1 SINE B4 -12 153 16 2 806 290 252 121 0 chr17 29092597 29092696 -66179955 - PB1D10 SINE Alu 0 117 7 2 806 364 280 117 78 chr17 29092704 29092909 -66179742 - L1M5 LINE L1 -3034 3112 2900 2 806 303 28 0 0 chr17 29093490 29093526 -66179125 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 806 359 312 142 17 chr17 29093688 29093722 -66178929 - B3A SINE B2 0 198 167 2 806 354 45 0 0 chr17 29093722 29093766 -66178885 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 806 359 312 142 17 chr17 29093766 29093907 -66178744 - B3A SINE B2 -32 166 2 2 806 516 223 168 49 chr17 29093919 29094122 -66178529 - Lx8 LINE L1 0 7473 7247 2 806 396 304 50 12 chr17 29094219 29094379 -66178272 - Lx8 LINE L1 -448 7025 6860 2 806 440 236 89 18 chr17 29094552 29094664 -66177987 + PB1D9 SINE Alu 1 120 0 2 806 352 221 109 73 chr17 29095360 29095497 -66177154 - B1F2 SINE Alu -7 142 1 2 806 822 171 7 40 chr17 29095576 29095728 -66176923 - B1_Mus2 SINE Alu 0 147 1 2 806 985 90 83 0 chr17 29095760 29095893 -66176758 - B1_Mus1 SINE Alu 0 148 5 2 806 967 184 89 5 chr17 29095989 29096180 -66176471 - B3 SINE B2 -8 208 2 2 806 225 0 0 0 chr17 29096285 29096310 -66176341 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 2 806 370 222 156 0 chr17 29096310 29096400 -66176251 - ID_B1 SINE B4 -12 212 109 2 806 220 236 26 212 chr17 29096400 29096423 -66176228 - PB1D9 SINE Alu -12 108 17 2 806 386 281 32 40 chr17 29096498 29096624 -66176027 - RSINE1 SINE B4 -39 126 2 2 806 482 207 18 9 chr17 29096628 29096740 -66175911 - RCHARR1 DNA MER1_type -99 875 763 2 806 1195 61 7 0 chr17 29096746 29096893 -66175758 + B1_Mus1 SINE Alu 1 148 0 2 806 630 262 26 32 chr17 29096963 29097117 -66175534 + ID_B1 SINE B4 63 215 -9 2 806 637 273 92 39 chr17 29097436 29097642 -66175009 + ID_B1 SINE B4 4 220 -4 2 806 274 282 207 49 chr17 29097646 29097810 -66174841 + B3A SINE B2 3 192 -3 2 807 660 150 26 9 chr17 29098098 29098212 -66174439 - B1_Mus1 SINE Alu -1 147 32 2 807 220 264 62 100 chr17 29098983 29099063 -66173588 - ID4_ SINE ID -4 79 3 2 807 668 222 64 49 chr17 29099072 29099276 -66173375 - B3 SINE B2 0 216 10 2 807 320 255 106 0 chr17 29100465 29100559 -66172092 + PB1D7 SINE Alu 5 108 -12 2 807 441 320 40 0 chr17 29100562 29100712 -66171939 + ID_B1 SINE B4 1 156 -68 2 807 244 364 30 0 chr17 29101227 29101326 -66171325 + B4 SINE B4 15 116 -176 2 807 330 26 0 0 chr17 29101622 29101661 -66170990 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 807 228 265 0 57 chr17 29101758 29101846 -66170805 + B1F SINE Alu 11 94 -55 2 807 715 115 0 69 chr17 29102038 29102169 -66170482 + B1_Mur4 SINE Alu 28 149 -1 2 807 555 230 71 0 chr17 29102501 29102627 -66170024 + B1_Mur1 SINE Alu 2 136 -13 2 807 1239 112 26 5 chr17 29102629 29102818 -66169833 - B2_Mm2 SINE B2 0 195 3 2 807 1249 86 26 26 chr17 29103228 29103419 -66169232 + B2_Mm1a SINE B2 2 192 -1 2 807 823 167 23 0 chr17 29105586 29105718 -66166933 - B1_Mur4 SINE Alu -13 137 3 2 807 698 261 82 41 chr17 29107313 29107509 -66165142 + B3 SINE B2 1 204 -12 2 807 319 252 64 112 chr17 29110246 29110371 -66162280 + MT2B LTR ERVL 139 257 -344 2 807 663 157 95 9 chr17 29110283 29110399 -66162252 + B1_Mur2 SINE Alu 17 142 -7 2 807 465 278 52 0 chr17 29110932 29111047 -66161604 + ID_B1 SINE B4 91 211 -13 2 807 457 254 35 21 chr17 29111049 29111190 -66161461 + RSINE1 SINE B4 4 146 -19 3 807 188 274 151 23 chr17 29111245 29111331 -66161320 + L2 LINE L2 1796 1892 -1527 3 807 1308 86 36 46 chr17 29111945 29112141 -66160510 + B2_Mm2 SINE B2 2 195 0 3 807 1202 62 0 0 chr17 29113479 29113625 -66159026 + B1_Mm SINE Alu 2 147 0 3 807 714 172 16 0 chr17 29113651 29113773 -66158878 + B3 SINE B2 3 126 -90 3 807 324 70 0 0 chr17 29113775 29113818 -66158833 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 807 218 262 141 12 chr17 29113848 29113933 -66158718 + RSINE1 SINE B4 62 157 -8 3 807 321 277 60 30 chr17 29114230 29114364 -66158287 + B1F SINE Alu 5 142 -7 3 807 305 234 52 0 chr17 29114664 29114741 -66157910 + PB1D9 SINE Alu 39 119 -1 3 807 1658 26 11 0 chr17 29114909 29115098 -66157553 + B2_Mm1a SINE B2 1 191 -2 3 807 253 260 12 49 chr17 29115165 29115246 -66157405 - ID4_ SINE ID -3 80 3 3 807 747 218 90 60 chr17 29115523 29115791 -66156860 - B4 SINE B4 -16 276 1 3 807 345 225 81 118 chr17 29116335 29116496 -66156155 + MT2B LTR ERVL 102 256 -345 3 807 736 111 34 8 chr17 29116405 29116523 -66156128 + B1_Mus1 SINE Alu 9 129 -19 3 807 507 179 132 0 chr17 29116536 29116642 -66156009 + PB1D9 SINE Alu 1 120 0 3 807 308 68 66 33 chr17 29116747 29116838 -66155813 + A-rich Low_complexity Low_complexity 1 94 0 3 807 1392 84 5 16 chr17 29116894 29117088 -66155563 - B2_Mm1a SINE B2 0 193 2 3 807 337 248 39 39 chr17 29117220 29117350 -66155301 - B4A SINE B4 -86 206 77 3 807 377 282 103 89 chr17 29117408 29117490 -66155161 + B4 SINE B4 13 199 -93 3 807 770 116 74 0 chr17 29117490 29117611 -66155040 + B1_Mur4 SINE Alu 13 142 -8 3 807 377 282 103 89 chr17 29117611 29117622 -66155029 + B4 SINE B4 200 229 -63 3 807 1620 0 3 55 chr17 29117622 29118001 -66154650 + (GGGAGA)n Simple_repeat Simple_repeat 1 358 0 3 807 240 35 0 0 chr17 29118001 29118030 -66154621 + (GGAGA)n Simple_repeat Simple_repeat 1 29 0 3 807 231 36 0 0 chr17 29118040 29118068 -66154583 + (CAGG)n Simple_repeat Simple_repeat 2 29 0 3 807 248 257 50 66 chr17 29118581 29118702 -66153949 - PB1D9 SINE Alu -1 119 1 3 807 384 234 20 16 chr17 29118706 29118808 -66153843 - B1_Mur2 SINE Alu -6 143 17 3 807 237 83 0 0 chr17 29119180 29119216 -66153435 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 807 21 57 0 0 chr17 29121423 29121458 -66151193 + AT_rich Low_complexity Low_complexity 1 35 0 3 807 350 278 36 27 chr17 29121485 29121596 -66151055 - PB1D9 SINE Alu 0 120 9 3 807 211 192 75 19 chr17 29121747 29121800 -66150851 - ID2 SINE ID -3 80 25 3 807 505 256 0 81 chr17 29122080 29122216 -66150435 + ID_B1 SINE B4 8 132 -92 3 807 1386 75 43 5 chr17 29122343 29122530 -66150121 + B2_Mm2 SINE B2 1 194 -1 3 807 1287 93 5 35 chr17 29122587 29122760 -66149891 + B2_Mm2 SINE B2 2 174 -21 3 807 1133 57 21 0 chr17 29122760 29122901 -66149750 + B1_Mus1 SINE Alu 1 144 -4 3 807 189 0 0 0 chr17 29122910 29122931 -66149720 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 3 807 1287 93 5 35 chr17 29122931 29122947 -66149704 + B2_Mm2 SINE B2 179 194 -1 3 807 197 65 32 0 chr17 29122949 29122980 -66149671 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 3 807 1018 160 16 16 chr17 29123438 29123628 -66149023 + B2_Mm2 SINE B2 2 191 -4 3 807 730 179 20 40 chr17 29123641 29123792 -66148859 + B1_Mur3 SINE Alu 1 148 -1 3 807 884 230 35 25 chr17 29123873 29124074 -66148577 - B3 SINE B2 -13 203 1 3 807 800 112 166 18 chr17 29124787 29124950 -66147701 - B2_Mm2 SINE B2 -8 187 1 3 807 373 240 51 20 chr17 29125595 29125693 -66146958 + PB1D7 SINE Alu 20 120 0 3 807 1445 49 21 16 chr17 29125775 29125961 -66146690 - B2_Mm2 SINE B2 -8 187 1 3 807 636 245 101 26 chr17 29125991 29126180 -66146471 - B3 SINE B2 0 216 14 3 807 403 270 30 0 chr17 29126175 29126275 -66146376 - PB1D9 SINE Alu -13 107 5 3 807 756 244 21 23 chr17 29126285 29126476 -66146175 - B3A SINE B2 -6 210 14 3 807 552 221 130 0 chr17 29126543 29126674 -66145977 - B1_Mur2 SINE Alu 0 149 2 3 807 21 57 0 0 chr17 29126683 29126718 -66145933 + AT_rich Low_complexity Low_complexity 1 35 0 3 807 282 222 0 0 chr17 29126743 29126797 -66145854 - B3A SINE B2 -144 54 1 3 807 841 175 90 7 chr17 29126938 29127093 -66145558 - U2 snRNA snRNA -20 168 1 3 807 301 238 115 40 chr17 29127570 29127682 -66144969 - PB1D10 SINE Alu 0 117 3 3 807 399 252 67 10 chr17 29127937 29128041 -66144610 + PB1D10 SINE Alu 7 116 -1 3 807 500 238 20 0 chr17 29128964 29129065 -66143586 - PB1D7 SINE Alu -9 111 9 3 807 308 162 29 29 chr17 29129015 29129085 -66143566 + YREP_Mm Unknown Unknown 257 326 -1486 3 807 1236 61 0 0 chr17 29129530 29129678 -66142973 + B1_Mus1 SINE Alu 1 148 0 3 807 422 266 64 0 chr17 29129788 29129897 -66142754 + RSINE1 SINE B4 2 117 -48 3 807 201 39 0 0 chr17 29129927 29129953 -66142698 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 807 23 0 0 0 chr17 29129963 29129986 -66142665 + AT_rich Low_complexity Low_complexity 1 23 0 3 807 340 160 117 26 chr17 29129990 29130067 -66142584 + RLTR25B LTR ERVK 426 509 -519 3 807 785 39 19 0 chr17 29130005 29130108 -66142543 + B1_Mm SINE Alu 43 147 0 3 807 231 61 0 0 chr17 29130108 29130141 -66142510 + (A)n Simple_repeat Simple_repeat 1 33 0 3 807 624 258 60 0 chr17 29130172 29130323 -66142328 + B3 SINE B2 55 214 -2 3 807 1626 26 11 0 chr17 29130528 29130718 -66141933 + B2_Mm1a SINE B2 2 193 0 3 807 1294 77 0 47 chr17 29130736 29130905 -66141746 + B2_Mm2 SINE B2 1 165 -30 3 807 1501 52 0 50 chr17 29130905 29131107 -66141544 + B2_Mm1t SINE B2 2 193 0 3 807 1294 77 0 47 chr17 29131107 29131127 -66141524 + B2_Mm2 SINE B2 166 181 -14 3 807 392 121 0 4 chr17 29131159 29131223 -66141428 + B2_Mm2 SINE B2 47 108 -108 3 807 198 0 0 0 chr17 29131232 29131254 -66141397 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 3 807 1056 77 7 47 chr17 29131261 29131411 -66141240 - B1_Mus2 SINE Alu -1 146 3 3 807 417 205 161 57 chr17 29131819 29131943 -66140708 - ID_B1 SINE B4 0 224 88 3 807 293 278 93 0 chr17 29132126 29132234 -66140417 + PB1D9 SINE Alu 1 118 -2 3 807 21 0 0 0 chr17 29132244 29132265 -66140386 + AT_rich Low_complexity Low_complexity 1 21 0 3 807 952 233 4 119 chr17 29132265 29132509 -66140142 - B3 SINE B2 0 216 1 3 807 792 104 184 0 chr17 29132739 29132864 -66139787 + B1_Mus1 SINE Alu 1 148 0 3 807 1556 110 31 124 chr17 29132893 29133247 -66139404 + L1_Mus3 LINE L1 6317 6637 -1 3 807 731 113 100 50 chr17 29133263 29133403 -66139248 + B2_Mm2 SINE B2 29 175 -20 3 807 1208 37 127 6 chr17 29133406 29133571 -66139080 - B2_Mm1a SINE B2 -7 186 2 3 807 952 143 7 0 chr17 29134059 29134206 -66138445 - B1_Mus1 SINE Alu 0 148 1 3 807 569 219 0 79 chr17 29134351 29134490 -66138161 + B1_Mur3 SINE Alu 9 136 -13 3 807 715 181 256 28 chr17 29134513 29134689 -66137962 - B3 SINE B2 0 216 1 3 807 257 191 138 106 chr17 29134704 29134892 -66137759 - RLTR12A LTR ERVK -4 564 371 3 807 397 285 63 0 chr17 29134970 29135128 -66137523 + L1M5 LINE L1 4485 4652 -1494 3 807 245 319 119 46 chr17 29135249 29135400 -66137251 + RSINE1 SINE B4 2 163 -2 3 807 464 284 108 36 chr17 29135520 29135659 -66136992 + RSINE1 SINE B4 10 158 -7 3 807 370 238 113 75 chr17 29135883 29136069 -66136582 + L1MD LINE L1 5118 5310 -836 3 807 783 171 8 8 chr17 29136069 29136199 -66136452 + B1_Mur2 SINE Alu 1 130 -19 3 807 1211 41 0 27 chr17 29136233 29136383 -66136268 - B1_Mm SINE Alu -1 146 1 3 807 259 267 50 55 chr17 29136472 29136634 -66136017 - MIR SINE MIR -79 189 21 3 807 229 250 0 71 chr17 29136865 29136921 -66135730 - ID4_ SINE ID -31 52 1 3 807 943 234 118 88 chr17 29137219 29137351 -66135300 + MTE2a LTR MaLR 1 138 -241 3 807 563 226 69 40 chr17 29137351 29137526 -66135125 + B3A SINE B2 2 181 -17 3 807 943 234 118 88 chr17 29137526 29137758 -66134893 + MTE2a LTR MaLR 139 376 -3 3 807 1505 252 53 30 chr17 29137809 29138206 -66134445 - MTD LTR MaLR -2 417 12 3 807 1191 75 0 0 chr17 29138322 29138469 -66134182 + B1_Mus1 SINE Alu 2 148 0 3 807 1220 41 0 7 chr17 29138471 29138619 -66134032 + B1_Mus2 SINE Alu 1 147 0 3 807 594 154 89 110 chr17 29138703 29138849 -66133802 - B1_Mus1 SINE Alu -5 143 1 3 807 25 0 0 0 chr17 29138882 29138907 -66133744 + AT_rich Low_complexity Low_complexity 1 25 0 3 807 349 257 107 19 chr17 29138966 29139069 -66133582 + ID_B1 SINE B4 81 192 -32 3 807 267 75 0 0 chr17 29139138 29139162 -66133489 + (T)n Simple_repeat Simple_repeat 1 24 0 3 807 1260 41 0 0 chr17 29139162 29139308 -66133343 - B1_Mm SINE Alu 0 147 2 3 807 267 75 0 0 chr17 29139308 29139323 -66133328 + (T)n Simple_repeat Simple_repeat 1 15 0 3 807 1249 41 0 0 chr17 29139350 29139495 -66133156 + B1_Mus1 SINE Alu 4 148 0 3 807 408 214 92 0 chr17 29139816 29139914 -66132737 - PB1D10 SINE Alu -5 112 6 3 807 1101 95 0 0 chr17 29139981 29140128 -66132523 - B1_Mus2 SINE Alu 0 147 1 3 807 1622 37 0 0 chr17 29140251 29140438 -66132213 + B2_Mm1a SINE B2 2 188 -5 4 807 364 225 86 29 chr17 29140443 29140548 -66132103 - B1F1 SINE Alu -13 136 26 4 807 23 33 0 0 chr17 29140794 29140824 -66131827 + AT_rich Low_complexity Low_complexity 1 30 0 4 807 628 237 37 7 chr17 29140956 29141092 -66131559 + RSINE1 SINE B4 1 140 -25 4 807 542 186 0 10 chr17 29141264 29141362 -66131289 - B1F SINE Alu -52 97 1 4 807 1071 108 0 0 chr17 29141389 29141537 -66131114 - B1_Mus1 SINE Alu 0 148 1 4 807 1223 48 0 0 chr17 29141566 29141713 -66130938 - B1_Mus2 SINE Alu 0 147 1 4 807 319 211 56 0 chr17 29141932 29142003 -66130648 + ID4 SINE ID 8 82 -1 4 807 280 292 86 49 chr17 29142003 29142094 -66130557 + ID_B1 SINE B4 8 175 -49 4 807 364 75 0 19 chr17 29142058 29142112 -66130539 + B1_Mus2 SINE Alu 90 142 -5 4 807 252 86 0 0 chr17 29142114 29142149 -66130502 + (CCAA)n Simple_repeat Simple_repeat 1 35 0 4 807 883 184 14 0 chr17 29142166 29142313 -66130338 + B1_Mur2 SINE Alu 1 149 0 4 807 1117 70 0 27 chr17 29143035 29143172 -66129479 + B1_Mus2 SINE Alu 1 136 -11 4 807 285 29 0 0 chr17 29143172 29143206 -66129445 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 807 593 162 19 0 chr17 29143226 29143331 -66129320 + B1_Mur3 SINE Alu 40 146 -3 4 807 760 84 0 40 chr17 29143338 29143462 -66129189 + BC1_Mm scRNA scRNA 1 119 -33 4 807 425 73 0 10 chr17 29143472 29143585 -66129066 + B2_Mm2 SINE B2 47 194 -1 4 807 384 77 0 0 chr17 29143585 29143637 -66129014 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 4 807 601 200 18 1 chr17 29143661 29143792 -66128859 + B1F2 SINE Alu 2 144 -5 4 807 296 24 24 0 chr17 29143969 29144010 -66128641 + (TTTTG)n Simple_repeat Simple_repeat 3 44 0 4 807 21 95 0 0 chr17 29144902 29144965 -66127686 + GC_rich Low_complexity Low_complexity 1 63 0 4 807 356 258 88 31 chr17 29145078 29145238 -66127413 - L1MC4a LINE L1 -7 7875 7707 4 807 413 199 44 150 chr17 29145685 29145817 -66126834 - B4A SINE B4 -68 224 101 4 807 294 29 0 0 chr17 29145817 29145852 -66126799 + (CCA)n Simple_repeat Simple_repeat 2 36 0 4 807 413 199 44 150 chr17 29145852 29145879 -66126772 - B4A SINE B4 -192 100 82 4 807 1279 14 0 7 chr17 29145900 29146048 -66126603 - B1_Mm SINE Alu 0 147 1 4 807 207 69 0 0 chr17 29146100 29146129 -66126522 + (T)n Simple_repeat Simple_repeat 1 29 0 4 807 391 191 40 120 chr17 29146140 29146265 -66126386 - ID_B1 SINE B4 -5 219 105 4 807 1107 95 0 0 chr17 29146535 29146683 -66125968 + B1_Mus1 SINE Alu 1 148 0 4 807 189 94 0 0 chr17 29146683 29146715 -66125936 + (A)n Simple_repeat Simple_repeat 1 32 0 4 807 527 234 0 0 chr17 29146720 29146814 -66125837 + B3 SINE B2 32 125 -91 4 807 941 267 89 52 chr17 29146812 29147311 -66125340 - RMER4B LTR ERVK -23 588 11 4 807 305 250 143 0 chr17 29147309 29147393 -66125258 + B3 SINE B2 118 213 -3 4 807 297 318 82 77 chr17 29147423 29147617 -66125034 + B3A SINE B2 2 196 -2 4 807 189 107 0 0 chr17 29147623 29147651 -66125000 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 807 1123 63 0 14 chr17 29147673 29147817 -66124834 - B1_Mus2 SINE Alu -5 142 1 4 807 543 239 20 55 chr17 29148133 29148279 -66124372 - B3A SINE B2 -16 182 42 4 807 219 180 200 0 chr17 29148271 29148321 -66124330 - B1_Mur1 SINE Alu -41 108 49 4 807 246 62 0 0 chr17 29148321 29148353 -66124298 + (CCTG)n Simple_repeat Simple_repeat 4 35 0 4 807 1236 96 0 69 chr17 29148383 29148408 -66124243 - B2_Mm2 SINE B2 0 195 176 4 807 1374 83 0 6 chr17 29148408 29148589 -66124062 + B2_Mm2 SINE B2 2 181 -14 4 807 1236 96 0 69 chr17 29148589 29148765 -66123886 - B2_Mm2 SINE B2 -20 175 8 4 807 278 106 0 21 chr17 29148770 29148818 -66123833 + (TCCC)n Simple_repeat Simple_repeat 3 49 0 4 807 222 300 114 0 chr17 29148829 29148899 -66123752 - B1_Mus2 SINE Alu -65 82 5 4 807 244 180 0 74 chr17 29149041 29149095 -66123556 + B1_Mus1 SINE Alu 37 86 -62 4 807 360 0 0 0 chr17 29149507 29149547 -66123104 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 807 236 30 30 0 chr17 29149697 29149730 -66122921 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 807 684 263 60 55 chr17 29149901 29149948 -66122703 + B3 SINE B2 2 51 -165 4 807 314 23 23 0 chr17 29149948 29149991 -66122660 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 4 807 1112 52 8 0 chr17 29149991 29150125 -66122526 - B1_Mus1 SINE Alu -13 135 1 4 807 684 263 60 55 chr17 29150125 29150277 -66122374 + B3 SINE B2 52 202 -14 4 807 264 135 18 88 chr17 29150274 29150331 -66122320 - B3 SINE B2 -9 207 155 4 807 447 250 0 0 chr17 29150331 29150463 -66122188 + (TA)n Simple_repeat Simple_repeat 2 133 0 4 807 183 80 0 0 chr17 29150806 29150831 -66121820 + (TGGGGG)n Simple_repeat Simple_repeat 2 26 0 4 807 358 21 0 0 chr17 29150936 29150984 -66121667 + B1_Mus2 SINE Alu 100 147 0 4 807 1131 107 35 6 chr17 29151021 29151190 -66121461 + B2_Mm2 SINE B2 15 188 -7 4 807 264 59 0 0 chr17 29151190 29151224 -66121427 + (GGA)n Simple_repeat Simple_repeat 1 34 0 4 807 256 275 8 168 chr17 29151763 29151894 -66120757 + B3A SINE B2 89 198 0 4 807 902 117 0 65 chr17 29151919 29152074 -66120577 + B2_Mm2 SINE B2 2 146 -49 4 807 342 0 0 0 chr17 29152074 29152112 -66120539 + (TA)n Simple_repeat Simple_repeat 1 38 0 4 807 742 139 72 65 chr17 29152136 29152274 -66120377 + B1_Mur4 SINE Alu 12 150 0 4 807 616 225 120 21 chr17 29152677 29152868 -66119783 + B3 SINE B2 7 216 0 4 807 1290 116 32 0 chr17 29152994 29153183 -66119468 - B2_Mm2 SINE B2 0 195 1 4 807 200 111 22 0 chr17 29153287 29153332 -66119319 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 4 807 1159 62 0 0 chr17 29153334 29153478 -66119173 - B1_Mus2 SINE Alu 0 147 4 4 807 384 22 0 0 chr17 29153683 29153728 -66118923 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 807 253 254 16 16 chr17 29154050 29154114 -66118537 - B1_Mur3 SINE Alu -41 108 45 4 807 1249 40 0 0 chr17 29154136 29154284 -66118367 - B1_Mus1 SINE Alu 0 148 1 4 807 22 35 0 0 chr17 29154288 29154317 -66118334 + AT_rich Low_complexity Low_complexity 1 29 0 4 807 390 191 119 0 chr17 29154391 29154475 -66118176 + ID_B1 SINE B4 131 224 0 4 807 1409 74 16 0 chr17 29154521 29154710 -66117941 + B2_Mm1t SINE B2 2 193 0 4 807 420 254 123 0 chr17 29154710 29154824 -66117827 + RSINE1 SINE B4 29 156 -9 4 807 1069 116 7 0 chr17 29154856 29155002 -66117649 - B1_Mus2 SINE Alu 0 147 1 4 807 39 71 0 10 chr17 29155002 29155032 -66117619 + AT_rich Low_complexity Low_complexity 1 30 0 4 807 654 233 72 13 chr17 29155032 29155184 -66117467 + RSINE1 SINE B4 3 163 -2 4 807 39 71 0 10 chr17 29155184 29155252 -66117399 + AT_rich Low_complexity Low_complexity 1 68 0 4 807 224 94 31 0 chr17 29155265 29155297 -66117354 + PB1D9 SINE Alu 1 33 -87 4 807 447 212 71 0 chr17 29155393 29155492 -66117159 - B1F SINE Alu -7 142 37 4 807 560 283 57 139 chr17 29155677 29155845 -66116806 - B3 SINE B2 0 216 38 4 807 183 42 0 0 chr17 29155845 29155869 -66116782 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 807 339 283 57 139 chr17 29155869 29155909 -66116742 - B3A SINE B2 -161 37 7 4 807 1167 58 0 0 chr17 29156100 29156238 -66116413 + B1_Mm SINE Alu 1 138 -9 4 807 228 86 0 0 chr17 29156238 29156273 -66116378 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 807 700 156 116 8 chr17 29156820 29156949 -66115702 - B1_Mur1 SINE Alu -6 143 1 4 807 369 0 0 0 chr17 29157383 29157424 -66115227 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 807 290 224 0 79 chr17 29157615 29157678 -66114973 - ID4_ SINE ID -11 72 15 4 807 619 215 105 68 chr17 29157701 29157758 -66114893 + B3A SINE B2 2 55 -143 4 807 2522 77 12 0 chr17 29157758 29158081 -66114570 + ORR1A2 LTR MaLR 1 327 0 4 807 619 215 105 68 chr17 29158081 29158213 -66114438 + B3A SINE B2 56 198 0 4 807 1219 61 0 0 chr17 29158232 29158379 -66114272 + B1_Mus2 SINE Alu 1 147 0 4 807 346 253 11 0 chr17 29158892 29158983 -66113668 + PB1D9 SINE Alu 17 108 -12 4 807 360 0 0 0 chr17 29158983 29159023 -66113628 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 4 807 597 264 8 0 chr17 29159042 29159167 -66113484 + ID_B1 SINE B4 86 211 -13 4 807 241 118 39 0 chr17 29159172 29159223 -66113428 + (TTG)n Simple_repeat Simple_repeat 2 54 0 4 807 832 134 19 78 chr17 29159768 29159922 -66112729 - B1_Mur2 SINE Alu 0 149 5 4 807 1172 49 14 0 chr17 29159969 29160112 -66112539 - B1_Mus1 SINE Alu -1 147 3 4 807 444 248 165 0 chr17 29160125 29160246 -66112405 - B1F2 SINE Alu -8 141 1 4 807 404 285 97 30 chr17 29160314 29160448 -66112203 - B4A SINE B4 0 292 150 4 807 237 300 0 14 chr17 29160498 29160569 -66112082 - RSINE1 SINE B4 -95 70 1 4 807 639 140 28 0 chr17 29160610 29160717 -66111934 - B3A SINE B2 -88 110 1 4 807 1588 27 27 0 chr17 29160753 29160939 -66111712 + B2_Mm1a SINE B2 2 192 -1 4 807 321 117 0 0 chr17 29160946 29161006 -66111645 + (A)n Simple_repeat Simple_repeat 1 60 0 4 807 371 279 86 29 chr17 29161017 29161157 -66111494 - RSINE1 SINE B4 -7 158 11 4 807 253 263 172 28 chr17 29161160 29161340 -66111311 - ID_B1 SINE B4 -18 206 1 4 807 259 294 132 105 chr17 29162399 29162627 -66110024 - MTEa LTR MaLR -118 261 28 4 807 266 224 37 62 chr17 29162648 29162729 -66109922 - ID2 SINE ID -3 80 2 4 807 671 178 85 8 chr17 29162770 29162900 -66109751 - B1_Mur2 SINE Alu -9 140 1 5 807 288 130 0 0 chr17 29162903 29162949 -66109702 - MTEa LTR MaLR -331 48 3 4 807 584 48 82 12 chr17 29162995 29163080 -66109571 + B1_Mus2 SINE Alu 47 137 -10 5 807 208 0 62 0 chr17 29163080 29163112 -66109539 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 807 459 0 0 0 chr17 29163112 29163162 -66109489 + (GGAA)n Simple_repeat Simple_repeat 3 53 0 5 807 245 284 11 64 chr17 29163184 29163278 -66109373 + PB1D9 SINE Alu 27 115 -5 5 807 436 210 0 58 chr17 29163194 29163280 -66109371 + ID_B1 SINE B4 141 221 -3 5 807 180 0 0 0 chr17 29163288 29163308 -66109343 + (GA)n Simple_repeat Simple_repeat 2 21 0 5 807 253 63 0 42 chr17 29163423 29163484 -66109167 + B1_Mur4 SINE Alu 87 142 -8 5 807 186 43 0 0 chr17 29163531 29163554 -66109097 + (TGGGGG)n Simple_repeat Simple_repeat 2 24 0 5 807 1682 158 139 8 chr17 29163755 29164107 -66108544 + RMER10B LTR ERVL 1 398 0 5 807 1471 49 16 16 chr17 29164407 29164594 -66108057 + B2_Mm2 SINE B2 2 188 -7 5 807 1184 50 0 0 chr17 29164601 29164742 -66107909 + B1_Mus2 SINE Alu 1 141 -6 5 807 243 0 0 0 chr17 29164744 29164771 -66107880 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 807 1553 48 16 0 chr17 29164847 29165033 -66107618 + B2_Mm1t SINE B2 2 190 -3 5 807 824 162 0 29 chr17 29165279 29165419 -66107232 + B1_Mus1 SINE Alu 1 136 -12 5 807 921 192 11 80 chr17 29165413 29165600 -66107051 - B3A SINE B2 -24 174 1 5 807 351 113 0 0 chr17 29165618 29165671 -66106980 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 807 1185 205 10 0 chr17 29165679 29165884 -66106767 + B3 SINE B2 6 212 -4 5 807 217 355 71 40 chr17 29165913 29166039 -66106612 + B1F SINE Alu 20 149 0 5 807 967 199 39 6 chr17 29166054 29166236 -66106415 + B3 SINE B2 1 188 -28 5 807 234 146 0 68 chr17 29166508 29166552 -66106099 - ID_B1 SINE B4 -1 223 183 5 807 252 0 0 0 chr17 29166583 29166611 -66106040 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 5 807 214 288 0 33 chr17 29166611 29166664 -66105987 + B4 SINE B4 88 139 -153 5 807 537 154 0 0 chr17 29166670 29166780 -66105871 + GA-rich Low_complexity Low_complexity 2 111 0 5 807 274 301 90 69 chr17 29166781 29166793 -66105858 + RLTR25B LTR ERVK 427 448 -580 5 807 570 108 97 0 chr17 29166793 29166886 -66105765 + B1_Mur2 SINE Alu 40 141 -8 5 807 274 301 90 69 chr17 29166886 29166970 -66105681 + RLTR25B LTR ERVK 449 619 -409 5 807 1228 61 0 0 chr17 29166977 29167124 -66105527 + B1_Mm SINE Alu 1 147 0 5 807 180 0 0 0 chr17 29167208 29167228 -66105423 + (T)n Simple_repeat Simple_repeat 1 20 0 5 807 1364 57 17 6 chr17 29167608 29167784 -66104867 + B2_Mm2 SINE B2 2 179 -16 5 807 1039 91 14 34 chr17 29167801 29167949 -66104702 - B1_Mm SINE Alu 0 147 3 5 807 585 81 241 0 chr17 29167966 29168075 -66104576 - B1_Mur2 SINE Alu 0 149 22 5 807 1483 22 48 21 chr17 29168086 29168272 -66104379 - B2_Mm1a SINE B2 0 193 3 5 807 261 298 78 9 chr17 29168354 29168469 -66104182 - ID_B1 SINE B4 0 224 102 5 807 189 269 70 56 chr17 29169884 29169955 -66102696 - L3 LINE CR1 -1327 3162 3091 5 807 333 0 0 0 chr17 29169992 29170029 -66102622 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 807 377 185 100 85 chr17 29170807 29170937 -66101714 - B1_Mm SINE Alu 0 147 16 5 807 252 258 109 31 chr17 29171295 29171359 -66101292 - ID4_ SINE ID -4 79 11 5 807 215 231 0 55 chr17 29171427 29171482 -66101169 + B1F SINE Alu 95 146 -3 5 807 216 245 20 0 chr17 29171597 29171646 -66101005 - PB1D9 SINE Alu -3 117 68 5 807 1297 76 16 31 chr17 29171651 29171842 -66100809 - B2_Mm1a SINE B2 -5 188 1 5 807 231 292 214 8 chr17 29171920 29172051 -66100600 - RSINE1 SINE B4 0 165 8 5 807 562 120 21 42 chr17 29172090 29172186 -66100465 + PB1D9 SINE Alu 27 120 0 5 807 300 295 157 54 chr17 29172186 29172237 -66100414 + B4 SINE B4 112 273 -19 5 807 279 159 0 0 chr17 29172360 29172404 -66100247 + ID_B1 SINE B4 177 220 -4 5 807 414 0 0 0 chr17 29172430 29172476 -66100175 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 5 807 256 250 96 21 chr17 29172528 29172622 -66100029 - B1_Mur2 SINE Alu 0 149 49 5 807 1190 82 0 0 chr17 29172954 29173100 -66099551 - B1_Mus2 SINE Alu 0 147 2 5 807 560 236 161 75 chr17 29173891 29173971 -66098680 + B3 SINE B2 1 94 -122 5 807 1006 79 50 0 chr17 29173971 29174111 -66098540 - B1_Mm SINE Alu 0 147 1 5 807 560 236 161 75 chr17 29174111 29174204 -66098447 + B3 SINE B2 95 189 -27 5 807 494 105 26 0 chr17 29174213 29174289 -66098362 + PB1D9 SINE Alu 43 120 0 5 807 474 175 203 34 chr17 29174468 29174586 -66098065 + B1_Mus1 SINE Alu 11 148 0 5 807 559 232 160 6 chr17 29174593 29174749 -66097902 - B3 SINE B2 -17 199 20 5 807 995 97 41 3 chr17 29174816 29174984 -66097667 + B2_Mm2 SINE B2 2 186 -7 5 807 1242 61 0 0 chr17 29175170 29175318 -66097333 - B1_Mus1 SINE Alu 0 148 1 5 807 1260 70 48 5 chr17 29177923 29178109 -66094542 - B2_Mm2 SINE B2 0 195 2 5 807 24 0 0 0 chr17 29179489 29179513 -66093138 + AT_rich Low_complexity Low_complexity 1 24 0 5 807 245 329 106 0 chr17 29180702 29180787 -66091864 + B3A SINE B2 38 131 -67 5 807 1565 48 21 0 chr17 29181011 29181199 -66091452 - B2_Mm1a SINE B2 -1 192 1 5 807 518 167 92 9 chr17 29182429 29182538 -66090113 + B1_Mus1 SINE Alu 23 140 -8 5 807 1153 119 51 0 chr17 29182581 29182757 -66089894 - B2_Mm2 SINE B2 -8 187 3 5 807 380 237 227 40 chr17 29182766 29182942 -66089709 - B3 SINE B2 -7 209 1 5 807 356 204 303 9 chr17 29183499 29183608 -66089043 - B1_Mur4 SINE Alu -7 143 3 5 807 21 0 0 0 chr17 29183610 29183631 -66089020 + AT_rich Low_complexity Low_complexity 1 21 0 5 807 1465 44 32 11 chr17 29183645 29183830 -66088821 - B2_Mm1a SINE B2 -2 191 3 5 807 618 172 156 0 chr17 29183847 29183969 -66088682 - B3 SINE B2 -17 199 59 5 807 365 232 0 28 chr17 29184047 29184118 -66088533 - RSINE1 SINE B4 -93 72 4 5 807 407 278 119 8 chr17 29184149 29184283 -66088368 - B1F2 SINE Alu 0 149 1 5 807 367 240 28 37 chr17 29184301 29184409 -66088242 - PB1D10 SINE Alu -5 112 6 5 807 335 234 47 0 chr17 29184720 29184784 -66087867 + ID4_ SINE ID 11 77 -6 5 807 690 276 0 0 chr17 29184727 29184861 -66087790 + ID_B1 SINE B4 22 155 -69 5 807 260 295 65 77 chr17 29184742 29184911 -66087740 + MT2B2 LTR ERVL 121 287 -297 5 807 439 191 22 11 chr17 29184888 29184978 -66087673 + PB1D9 SINE Alu 9 99 -21 5 807 835 188 27 7 chr17 29185008 29185158 -66087493 + B3A SINE B2 8 160 -38 5 807 1207 71 131 0 chr17 29185446 29185614 -66087037 + B2_Mm2 SINE B2 1 190 -5 5 807 610 131 8 1 chr17 29185635 29185741 -66086910 + B3 SINE B2 9 119 -79 5 807 496 242 10 33 chr17 29186447 29186598 -66086053 - B1_Mur2 SINE Alu 0 149 4 5 807 579 201 0 0 chr17 29188405 29188559 -66084092 + (TG)n Simple_repeat Simple_repeat 2 155 0 5 807 436 244 23 0 chr17 29188613 29188785 -66083866 + (TATG)n Simple_repeat Simple_repeat 4 179 0 5 807 429 265 0 0 chr17 29188799 29188969 -66083682 + (TG)n Simple_repeat Simple_repeat 2 171 0 5 807 660 265 53 0 chr17 29189132 29189283 -66083368 + RSINE1 SINE B4 3 161 -4 5 807 314 304 33 0 chr17 29189397 29189489 -66083162 + B3 SINE B2 117 211 -5 5 807 925 65 182 7 chr17 29189491 29189645 -66083006 + B2_Mm2 SINE B2 1 181 -14 5 807 1264 34 0 13 chr17 29189645 29189793 -66082858 - B1_Mus2 SINE Alu 0 147 1 5 807 504 212 32 70 chr17 29190537 29190694 -66081957 + B3 SINE B2 3 153 -63 5 807 316 233 0 52 chr17 29190651 29190728 -66081923 - B1_Mus1 SINE Alu -75 73 1 5 807 369 0 0 0 chr17 29191336 29191377 -66081274 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 807 228 217 274 32 chr17 29191424 29191548 -66081103 + RSINE1 SINE B4 11 164 -1 5 807 197 122 0 47 chr17 29191818 29191861 -66080790 + GA-rich Low_complexity Low_complexity 1 41 0 5 807 303 282 87 47 chr17 29191866 29192015 -66080636 + HAL1-3A_ME LINE L1 2282 2436 -422 5 807 357 271 16 16 chr17 29192015 29192139 -66080512 + GA-rich Low_complexity Low_complexity 1 124 0 5 807 267 203 246 0 chr17 29192145 29192214 -66080437 + RSINE1 SINE B4 47 132 -33 5 807 26 0 0 27 chr17 29192253 29192274 -66080377 + AT_rich Low_complexity Low_complexity 1 21 0 5 807 238 291 86 60 chr17 29192274 29192391 -66080260 + PB1D7 SINE Alu 1 120 0 5 807 26 0 0 27 chr17 29192391 29192406 -66080245 + AT_rich Low_complexity Low_complexity 1 15 0 5 807 184 0 62 31 chr17 29192420 29192452 -66080199 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 5 807 1126 29 7 0 chr17 29192454 29192592 -66080059 + B1_Mm SINE Alu 9 147 0 5 807 612 184 0 0 chr17 29193168 29193266 -66079385 - B1_Mm SINE Alu -47 100 3 5 807 526 278 32 74 chr17 29193270 29193478 -66079173 - B3A SINE B2 0 216 1 5 807 366 284 101 29 chr17 29193515 29193653 -66078998 - ID_B1 SINE B4 0 224 77 5 807 216 0 0 0 chr17 29193686 29193710 -66078941 + (A)n Simple_repeat Simple_repeat 1 24 0 5 807 871 231 102 0 chr17 29194401 29194587 -66078064 - B3 SINE B2 -5 211 7 6 807 516 245 167 30 chr17 29194805 29194973 -66077678 - ID_B1 SINE B4 -25 199 9 6 807 279 0 0 0 chr17 29195392 29195423 -66077228 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 807 184 244 83 104 chr17 29195811 29195907 -66076744 - L2b LINE L2 -6 3369 3276 6 807 199 241 14 34 chr17 29196416 29196496 -66076155 - MIR SINE MIR -57 151 73 6 807 243 0 0 0 chr17 29196527 29196554 -66076097 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 6 807 485 298 0 16 chr17 29196560 29196686 -66075965 + PB1 SINE Alu 1 124 -3 6 807 414 269 89 7 chr17 29196861 29196882 -66075769 + B1F2 SINE Alu 1 92 -57 6 807 451 223 48 10 chr17 29196882 29196986 -66075665 + ID_B1 SINE B4 104 211 -13 6 807 195 42 0 0 chr17 29197305 29197329 -66075322 + (GA)n Simple_repeat Simple_repeat 1 24 0 6 807 313 310 0 0 chr17 29197331 29197418 -66075233 + ID_B1 SINE B4 138 224 0 6 807 1192 56 0 14 chr17 29197510 29197644 -66075007 + B1_Mus1 SINE Alu 2 135 -13 6 807 215 31 31 0 chr17 29197644 29197676 -66074975 + (CAAAA)n Simple_repeat Simple_repeat 1 33 0 6 807 674 231 57 6 chr17 29197973 29198010 -66074641 + ID SINE ID 36 80 -144 6 807 296 252 89 148 chr17 29198010 29198145 -66074506 + PB1 SINE Alu 1 127 0 6 807 366 195 0 0 chr17 29198287 29198369 -66074282 + CT-rich Low_complexity Low_complexity 2 83 0 6 807 211 200 0 0 chr17 29198498 29198533 -66074118 + B1_Mur1 SINE Alu 98 132 -17 6 807 236 77 0 25 chr17 29198541 29198581 -66074070 + (CAA)n Simple_repeat Simple_repeat 1 39 0 6 807 515 248 17 8 chr17 29198925 29199170 -66073481 + CT-rich Low_complexity Low_complexity 1 247 0 6 807 213 292 38 100 chr17 29199171 29199251 -66073400 - ID4 SINE ID -7 76 2 6 807 453 287 82 41 chr17 29199288 29199459 -66073192 - 7SK RNA RNA -90 241 64 6 807 269 310 0 14 chr17 29199983 29200029 -66072622 + (CAGAGA)n Simple_repeat Simple_repeat 6 51 0 6 807 189 0 0 0 chr17 29200029 29200050 -66072601 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 807 269 310 0 14 chr17 29200050 29200150 -66072501 + (CAGAGA)n Simple_repeat Simple_repeat 4 101 0 6 807 270 0 0 0 chr17 29200155 29200185 -66072466 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 807 245 326 10 78 chr17 29200187 29200290 -66072361 - PB1D7 SINE Alu -23 97 2 6 807 928 264 69 60 chr17 29200311 29200646 -66072005 - Tigger7 DNA MER2_type -2138 353 16 6 807 351 217 32 11 chr17 29200669 29200762 -66071889 - ID_B1 SINE B4 -129 95 1 6 807 457 186 141 44 chr17 29201059 29201194 -66071457 - B1F2 SINE Alu 0 149 2 6 807 532 228 79 24 chr17 29201085 29201211 -66071440 - ID_B1 SINE B4 -23 201 69 6 807 196 149 21 21 chr17 29201227 29201275 -66071376 + CT-rich Low_complexity Low_complexity 3 50 0 6 807 466 274 103 7 chr17 29201287 29201423 -66071228 - RSINE1 SINE B4 -14 151 3 6 807 794 72 22 4 chr17 29201455 29201594 -66071057 - B1_Mm SINE Alu 0 148 5 6 807 219 297 50 86 chr17 29201668 29201808 -66070843 - MIRb SINE MIR -21 247 113 6 807 599 189 9 0 chr17 29201840 29201951 -66070700 - B1_Mus2 SINE Alu -26 121 10 6 807 411 247 9 101 chr17 29201858 29202020 -66070631 - MT2B LTR ERVL -327 257 107 6 807 279 160 165 6 chr17 29202119 29202193 -66070458 + ORR1D1 LTR MaLR 1 79 -305 6 807 332 305 53 28 chr17 29202658 29202829 -66069822 - MLT1G3 LTR MaLR -142 437 262 6 807 407 266 117 81 chr17 29202920 29203120 -66069531 + B3A SINE B2 1 207 -9 6 807 613 203 86 14 chr17 29203145 29203285 -66069366 + B1_Mur4 SINE Alu 1 150 0 6 807 993 66 72 7 chr17 29203305 29203443 -66069208 + B1_Mm SINE Alu 1 147 0 6 807 255 281 73 73 chr17 29203456 29203480 -66069171 - B1_Mm SINE Alu -12 135 113 6 807 783 144 204 25 chr17 29203480 29203637 -66069014 + B2_Mm2 SINE B2 3 187 -8 6 807 421 213 53 11 chr17 29203640 29203735 -66068916 - ID_B1 SINE B4 -32 192 94 6 807 248 292 31 0 chr17 29203738 29203803 -66068848 - MLT1G3 LTR MaLR -356 239 173 6 807 21 57 0 0 chr17 29204195 29204230 -66068421 + AT_rich Low_complexity Low_complexity 1 35 0 6 807 1182 75 0 0 chr17 29204239 29204386 -66068265 + B1_Mus1 SINE Alu 2 148 0 6 807 1177 86 44 0 chr17 29204399 29204585 -66068066 + Lx2 LINE L1 6474 6645 -352 6 807 1280 117 42 9 chr17 29204583 29204799 -66067852 + Lx2 LINE L1 6775 6997 0 6 807 247 314 9 56 chr17 29204824 29204930 -66067721 - RSINE1 SINE B4 0 165 65 6 807 2295 104 21 6 chr17 29204930 29205258 -66067393 + MTA_Mm LTR MaLR 1 333 -63 6 807 221 131 43 21 chr17 29205268 29205315 -66067336 - B4A SINE B4 -223 69 22 6 807 332 343 94 42 chr17 29205408 29205621 -66067030 - ID_B1 SINE B4 0 224 1 6 807 430 336 89 86 chr17 29205878 29206135 -66066516 + LTR16A1 LTR ERVL 196 453 -3 6 807 261 333 21 56 chr17 29206330 29206473 -66066178 + MLT1I LTR MaLR 233 370 -41 6 807 722 229 14 7 chr17 29206632 29206777 -66065874 + ID_B1 SINE B4 79 224 0 6 807 373 330 0 25 chr17 29206777 29206898 -66065753 + MIR SINE MIR 140 257 -5 6 807 496 230 95 15 chr17 29207040 29207177 -66065474 - RSINE1 SINE B4 -14 151 4 6 807 682 298 67 63 chr17 29207417 29207671 -66064980 + MTE2b LTR MaLR 6 260 -119 6 807 1274 135 92 0 chr17 29207786 29207993 -66064658 + URR1A DNA MER1_type 1 226 0 6 807 222 37 0 0 chr17 29208066 29208093 -66064558 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 6 807 1715 21 0 0 chr17 29208353 29208543 -66064108 + B2_Mm1t SINE B2 1 190 -3 6 807 181 200 33 83 chr17 29209601 29209661 -66062990 - MIRc SINE MIR -57 211 155 6 807 625 183 102 34 chr17 29210726 29210873 -66061778 - ID_B1 SINE B4 -1 223 67 6 807 246 312 101 0 chr17 29211047 29211156 -66061495 + MIR SINE MIR 20 139 -123 6 807 667 252 67 54 chr17 29211270 29211509 -66061142 + MIR SINE MIR 12 253 -9 6 807 663 256 13 13 chr17 29211831 29211985 -66060666 - RSINE1 SINE B4 -1 164 11 6 807 313 336 115 0 chr17 29212195 29212299 -66060352 - RSINE1 SINE B4 -47 118 3 6 807 429 291 0 8 chr17 29212301 29212419 -66060232 - PB1D10 SINE Alu 0 117 1 6 807 1154 48 14 7 chr17 29212716 29212727 -66059924 - B1_Mus2 SINE Alu 0 147 135 6 807 236 30 0 29 chr17 29212727 29212761 -66059890 + (TTTTG)n Simple_repeat Simple_repeat 1 33 0 6 807 1154 48 14 7 chr17 29212761 29212895 -66059756 - B1_Mus2 SINE Alu -13 134 1 6 807 528 290 128 91 chr17 29212939 29213235 -66059416 - ORR1E LTR MaLR -52 307 1 6 807 291 93 0 0 chr17 29213292 29213335 -66059316 + (GA)n Simple_repeat Simple_repeat 1 43 0 6 807 435 276 60 119 chr17 29213335 29213553 -66059098 + MLT2C1 LTR ERVL 190 394 -3 6 807 674 55 0 11 chr17 29213580 29213672 -66058979 + (TTTC)n Simple_repeat Simple_repeat 2 92 0 6 807 404 307 26 9 chr17 29213672 29213776 -66058875 - ID_B1 SINE B4 -10 214 108 6 807 1417 68 6 0 chr17 29213806 29213983 -66058668 - B2_Mm1a SINE B2 -14 179 2 6 807 276 77 0 0 chr17 29214002 29214041 -66058610 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 807 623 196 61 68 chr17 29214041 29214189 -66058462 - B3 SINE B2 -69 147 1 6 807 469 265 97 15 chr17 29214349 29214483 -66058168 + RSINE1 SINE B4 2 146 -19 6 807 528 38 12 25 chr17 29214542 29214561 -66058090 + (GAA)n Simple_repeat Simple_repeat 3 20 0 6 807 1446 40 0 0 chr17 29214561 29214738 -66057913 + (GGAGAA)n Simple_repeat Simple_repeat 1 177 0 6 807 528 38 12 25 chr17 29214738 29214799 -66057852 + (GAA)n Simple_repeat Simple_repeat 3 64 0 6 807 213 203 149 0 chr17 29215120 29215194 -66057457 + L3 LINE CR1 991 1075 -3414 6 807 625 244 135 15 chr17 29215414 29215614 -66057037 - ID_B1 SINE B4 0 224 1 6 807 415 287 8 50 chr17 29215625 29215746 -66056905 - ID_B1 SINE B4 -23 201 86 6 807 261 83 0 0 chr17 29215781 29215817 -66056834 + (GAAA)n Simple_repeat Simple_repeat 1 36 0 6 807 612 248 14 0 chr17 29216333 29216474 -66056177 - ID_B1 SINE B4 0 224 82 6 807 1180 49 21 0 chr17 29216511 29216653 -66055998 - B1_Mus1 SINE Alu -2 146 2 6 807 567 223 24 16 chr17 29216698 29216821 -66055830 + RSINE1 SINE B4 3 126 -39 6 807 1257 132 16 0 chr17 29216886 29217076 -66055575 + B2_Mm2 SINE B2 2 194 -1 6 807 1260 21 14 0 chr17 29217079 29217224 -66055427 + B1_Mus2 SINE Alu 1 147 0 6 807 212 179 0 0 chr17 29217224 29217263 -66055388 + A-rich Low_complexity Low_complexity 1 39 0 6 807 283 273 50 20 chr17 29217278 29217379 -66055272 - B3 SINE B2 0 216 113 6 807 1028 136 36 42 chr17 29217409 29217601 -66055050 - B2_Mm2 SINE B2 -2 193 3 6 807 312 128 49 37 chr17 29217666 29217747 -66054904 + GA-rich Low_complexity Low_complexity 4 85 0 6 807 545 291 18 29 chr17 29218181 29218351 -66054300 - ID_B1 SINE B4 -3 221 54 6 807 289 292 14 0 chr17 29218364 29218455 -66054196 - ID4 SINE ID -51 101 7 6 807 234 318 0 3 chr17 29218543 29218618 -66054033 - PB1 SINE Alu -42 75 2 6 807 319 332 152 24 chr17 29219333 29219583 -66053068 + MLT1J2 LTR MaLR 95 376 -72 6 807 186 43 0 0 chr17 29219605 29219628 -66053023 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 6 807 1107 96 0 0 chr17 29219631 29219777 -66052874 - B1_Mus1 SINE Alu -2 146 1 6 807 1252 61 0 0 chr17 29219802 29219949 -66052702 - B1_Mus1 SINE Alu -1 147 1 7 807 436 241 15 11 chr17 29219990 29220100 -66052551 - B1F2 SINE Alu -31 118 1 7 807 237 65 0 0 chr17 29220105 29220136 -66052515 + (T)n Simple_repeat Simple_repeat 1 31 0 7 807 1253 41 0 0 chr17 29220136 29220282 -66052369 - B1_Mus2 SINE Alu 0 147 2 7 807 357 258 180 0 chr17 29220293 29220382 -66052269 - PB1D10 SINE Alu -9 108 4 7 807 816 237 24 142 chr17 29221073 29221165 -66051486 - ID_B1 SINE B4 -5 219 157 7 807 767 271 21 31 chr17 29221165 29221359 -66051292 - B3A SINE B2 -6 192 1 7 807 816 237 24 142 chr17 29221359 29221512 -66051139 - ID_B1 SINE B4 -68 156 3 7 807 296 250 70 88 chr17 29221667 29221781 -66050870 + B1_Mm SINE Alu 3 114 -33 7 807 304 156 179 83 chr17 29221735 29221819 -66050832 + RSINE1 SINE B4 37 128 -37 7 807 2585 193 33 28 chr17 29221819 29222582 -66050069 + RMER13B LTR ERVK 1 898 -10 7 807 1385 68 23 0 chr17 29222698 29222875 -66049776 + B2_Mm2 SINE B2 1 181 -14 7 807 1232 55 0 0 chr17 29222882 29223028 -66049623 - B1_Mus2 SINE Alu 0 147 2 7 807 24 32 0 0 chr17 29223028 29223059 -66049592 + AT_rich Low_complexity Low_complexity 1 31 0 7 807 230 204 20 39 chr17 29223061 29223112 -66049539 + 4.5SRNA scRNA scRNA 37 86 -8 7 807 647 92 71 0 chr17 29223071 29223169 -66049482 + B1_Mm SINE Alu 43 147 0 7 807 354 80 0 0 chr17 29223169 29223219 -66049432 + (A)n Simple_repeat Simple_repeat 1 50 0 7 807 1170 134 32 0 chr17 29223230 29223416 -66049235 + B2_Mm1a SINE B2 2 193 0 7 807 897 174 0 7 chr17 29223436 29223586 -66049065 + B1_Mur3 SINE Alu 1 149 0 7 807 333 284 0 0 chr17 29223652 29223733 -66048918 + (CA)n Simple_repeat Simple_repeat 2 82 0 7 807 856 183 6 11 chr17 29224333 29224695 -66047956 + (CATA)n Simple_repeat Simple_repeat 1 360 0 7 807 670 190 17 17 chr17 29224674 29224918 -66047733 + (CATATA)n Simple_repeat Simple_repeat 1 244 0 7 807 1824 183 11 39 chr17 29225038 29225373 -66047278 - ORR1D1 LTR MaLR 0 374 49 7 807 1620 38 0 0 chr17 29225373 29225559 -66047092 + B2_Mm1a SINE B2 2 187 -6 7 807 1824 183 11 39 chr17 29225559 29225605 -66047046 - ORR1D1 LTR MaLR -326 48 4 7 807 857 144 72 0 chr17 29225952 29226091 -66046560 + B1_Mur4 SINE Alu 2 150 0 7 807 203 114 23 0 chr17 29226096 29226140 -66046511 + (CAAT)n Simple_repeat Simple_repeat 2 46 0 7 807 279 231 44 62 chr17 29226313 29226420 -66046231 + MLT1J1 LTR MaLR 235 346 -65 7 807 1165 75 0 0 chr17 29226429 29226576 -66046075 - B1_Mus2 SINE Alu 0 147 1 7 807 1349 254 111 27 chr17 29226581 29226950 -66045701 + MTD LTR MaLR 12 411 -8 7 807 279 292 73 32 chr17 29226991 29227115 -66045536 - B4A SINE B4 -63 229 101 7 807 794 139 0 37 chr17 29227115 29227302 -66045349 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 807 450 252 10 10 chr17 29227303 29227403 -66045248 - B4 SINE B4 -178 114 15 7 807 338 266 87 50 chr17 29228916 29229039 -66043612 - PB1D10 SINE Alu -3 124 10 7 100 675 268 7 26 chr17 29228969 29229122 -66043529 - ID_B1 SINE B4 -67 157 8 7 808 364 302 47 0 chr17 29229122 29229228 -66043423 - PB1D10 SINE Alu -6 111 1 7 808 526 230 0 42 chr17 29229302 29229420 -66043231 + PB1D7 SINE Alu 2 114 -6 7 808 430 231 45 27 chr17 29230018 29230129 -66042522 - PB1D10 SINE Alu 0 117 5 7 808 577 271 26 52 chr17 29230140 29230370 -66042281 - ID_B1 SINE B4 0 224 1 7 808 279 0 0 0 chr17 29230879 29230910 -66041741 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 808 483 145 0 0 chr17 29232253 29232336 -66040315 + (TG)n Simple_repeat Simple_repeat 1 83 0 7 808 323 211 116 71 chr17 29233011 29233123 -66039528 - B1_Mur2 SINE Alu -12 137 21 7 808 319 167 33 0 chr17 29233361 29233421 -66039230 + PB1D7 SINE Alu 10 71 -49 7 808 387 192 39 0 chr17 29233563 29233641 -66039010 - B1_Mur1 SINE Alu -37 112 32 7 808 255 267 104 90 chr17 29233639 29233783 -66038868 - B1F SINE Alu -3 146 1 7 808 416 196 109 27 chr17 29233685 29233795 -66038856 - ID_B1 SINE B4 -36 188 70 7 808 268 274 153 53 chr17 29234564 29234695 -66037956 - MIR SINE MIR -118 158 7 7 808 234 0 0 0 chr17 29234832 29234858 -66037793 + (T)n Simple_repeat Simple_repeat 1 26 0 7 808 1282 34 0 0 chr17 29234858 29235005 -66037646 - B1_Mm SINE Alu 0 147 1 7 808 372 214 168 59 chr17 29236029 29236148 -66036503 + B3A SINE B2 2 133 -65 7 808 267 93 0 0 chr17 29236508 29236551 -66036100 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 7 808 233 337 77 50 chr17 29237481 29237662 -66034989 + L2c LINE L2 3192 3377 -10 7 808 590 68 50 8 chr17 29237694 29237813 -66034838 + (TG)n Simple_repeat Simple_repeat 2 125 0 7 808 231 327 202 18 chr17 29240628 29240796 -66031855 - ZP3AR Satellite Satellite -8 204 6 7 808 226 315 168 39 chr17 29241977 29242132 -66030519 + ZP3AR Satellite Satellite 6 180 -32 7 808 238 331 174 17 chr17 29242840 29243012 -66029639 - ZP3AR Satellite Satellite -8 204 6 7 808 238 331 174 17 chr17 29243250 29243422 -66029229 - ZP3AR Satellite Satellite -8 204 6 7 808 29 0 0 0 chr17 29246281 29246310 -66026341 + AT_rich Low_complexity Low_complexity 1 29 0 7 808 252 0 0 0 chr17 29246328 29246356 -66026295 + (CA)n Simple_repeat Simple_repeat 1 28 0 7 808 224 282 0 90 chr17 29246360 29246438 -66026213 - RSINE1 SINE B4 -79 86 16 7 808 872 132 22 7 chr17 29246563 29246700 -66025951 - B1_Mus1 SINE Alu 0 148 10 7 808 285 245 168 69 chr17 29246703 29246804 -66025847 + MTC LTR MaLR 11 121 -300 7 808 1163 156 49 25 chr17 29246797 29247001 -66025650 - URR1B DNA MER1_type -14 211 3 7 808 1875 125 64 3 chr17 29247003 29247301 -66025350 + MTC LTR MaLR 104 419 -2 7 808 661 229 143 12 chr17 29247338 29247506 -66025145 - B3 SINE B2 0 216 27 7 808 1230 48 7 0 chr17 29247506 29247652 -66024999 + B1_Mus2 SINE Alu 1 147 0 7 808 252 77 0 0 chr17 29247652 29247691 -66024960 + (CAAAA)n Simple_repeat Simple_repeat 1 39 0 7 808 254 179 0 0 chr17 29247694 29247733 -66024918 - B3A SINE B2 -159 39 1 7 808 530 165 44 0 chr17 29247738 29247829 -66024822 - B1F SINE Alu -6 143 49 7 808 3371 21 31 0 chr17 29247922 29248306 -66024345 - MTA_Mm LTR MaLR 0 396 1 7 808 214 271 108 54 chr17 29248797 29248871 -66023780 + RSINE1 SINE B4 76 153 -12 7 808 399 263 0 69 chr17 29248890 29248992 -66023659 + RSINE1 SINE B4 69 163 -2 7 808 355 100 14 14 chr17 29249090 29249161 -66023490 + (TA)n Simple_repeat Simple_repeat 2 72 0 7 808 725 193 74 0 chr17 29249171 29249306 -66023345 - B1_Mur4 SINE Alu 0 150 6 7 808 375 161 20 117 chr17 29249526 29249628 -66023023 - PB1D10 SINE Alu 0 117 34 7 808 485 0 0 0 chr17 29249856 29249910 -66022741 - ORR1A1 LTR MaLR -1 345 292 7 808 326 178 0 5 chr17 29249947 29250012 -66022639 - B2_Mm2 SINE B2 -107 109 47 7 808 1102 82 51 40 chr17 29250059 29250089 -66022562 - B2_Mm1t SINE B2 -14 179 153 7 808 1562 58 0 0 chr17 29250089 29250279 -66022372 + B2_Mm1t SINE B2 1 190 -3 7 808 1102 82 51 40 chr17 29250279 29250425 -66022226 - B2_Mm1t SINE B2 -41 152 1 7 808 1824 103 13 90 chr17 29250425 29250733 -66021918 - ORR1A2 LTR MaLR -43 284 1 7 808 351 0 0 0 chr17 29250869 29250908 -66021743 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 808 233 119 0 23 chr17 29251263 29251306 -66021345 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 7 808 604 208 0 9 chr17 29251308 29251415 -66021236 - PB1D9 SINE Alu -5 115 10 7 808 335 274 35 12 chr17 29251342 29251427 -66021224 - B4 SINE B4 -125 167 81 7 808 707 217 0 0 chr17 29251434 29251554 -66021097 - ID_B1 SINE B4 0 224 105 7 808 216 0 0 0 chr17 29251751 29251775 -66020876 + (GGGTG)n Simple_repeat Simple_repeat 4 27 0 7 808 482 31 16 0 chr17 29252348 29252412 -66020239 + (TG)n Simple_repeat Simple_repeat 1 65 0 7 808 297 0 0 0 chr17 29252412 29252444 -66020207 + (GA)n Simple_repeat Simple_repeat 1 33 0 7 808 195 283 0 0 chr17 29253208 29253254 -66019397 - L2a LINE L2 -11 3415 3370 7 808 225 197 0 0 chr17 29253448 29253514 -66019137 + (TG)n Simple_repeat Simple_repeat 1 66 0 7 808 554 220 6 0 chr17 29253553 29253730 -66018921 + (TG)n Simple_repeat Simple_repeat 2 179 0 7 808 279 0 0 0 chr17 29253730 29253761 -66018890 + (GA)n Simple_repeat Simple_repeat 1 31 0 7 808 339 287 85 0 chr17 29253762 29253856 -66018795 - PB1D7 SINE Alu -16 104 3 7 808 264 308 19 19 chr17 29253874 29253980 -66018671 - MIRb SINE MIR -130 138 33 7 808 781 183 28 0 chr17 29254482 29254624 -66018027 - B1F2 SINE Alu -3 146 1 7 808 234 0 0 0 chr17 29254773 29254799 -66017852 + (TG)n Simple_repeat Simple_repeat 2 27 0 7 808 523 284 35 0 chr17 29254799 29254915 -66017736 - RSINE1 SINE B4 -41 124 5 7 808 204 125 0 0 chr17 29254924 29254956 -66017695 + (CATATA)n Simple_repeat Simple_repeat 1 32 0 7 808 192 200 0 0 chr17 29254961 29255001 -66017650 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 808 307 262 103 0 chr17 29255379 29255486 -66017165 - L1MEg LINE L1 -4127 1957 1840 7 808 455 209 9 0 chr17 29255486 29255596 -66017055 + CT-rich Low_complexity Low_complexity 1 111 0 7 808 492 18 0 0 chr17 29255596 29255653 -66016998 + (TTTC)n Simple_repeat Simple_repeat 1 57 0 7 808 856 265 66 48 chr17 29256413 29256686 -66015965 + B4A SINE B4 15 292 0 7 808 675 182 11 22 chr17 29256713 29256893 -66015758 + (CATA)n Simple_repeat Simple_repeat 2 179 0 7 808 688 184 8 33 chr17 29256900 29257310 -66015341 + (CATATA)n Simple_repeat Simple_repeat 1 399 0 7 808 212 83 56 0 chr17 29257310 29257346 -66015305 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 808 270 81 0 0 chr17 29258274 29258311 -66014340 + (TTA)n Simple_repeat Simple_repeat 3 39 0 8 808 524 196 59 0 chr17 29258311 29258413 -66014238 - B1_Mur4 SINE Alu -12 138 31 8 808 3068 36 0 16 chr17 29258436 29258807 -66013844 - L1Md_F2 LINE L1 0 6582 6218 8 808 658 187 0 9 chr17 29258837 29258945 -66013706 + PB1D9 SINE Alu 3 109 -11 8 808 651 256 92 35 chr17 29258966 29259140 -66013511 - B3A SINE B2 -13 185 2 8 808 367 240 100 0 chr17 29259152 29259252 -66013399 - PB1D10 SINE Alu -7 110 1 8 808 731 256 43 0 chr17 29259505 29259669 -66012982 + ID_B1 SINE B4 1 171 -53 8 808 714 236 90 0 chr17 29259685 29259829 -66012822 - RSINE1 SINE B4 -5 160 4 8 808 265 216 150 75 chr17 29260126 29260206 -66012445 - B1F SINE Alu -53 96 11 8 808 352 213 68 85 chr17 29260138 29260256 -66012395 - B4A SINE B4 -135 157 42 8 808 256 250 20 14 chr17 29260290 29260436 -66012215 + (CA)n Simple_repeat Simple_repeat 2 148 0 8 808 671 274 127 116 chr17 29260443 29260798 -66011853 - RMER15 LTR ERVL -29 546 188 8 808 489 190 35 0 chr17 29260894 29260994 -66011657 + B1F2 SINE Alu 46 149 0 8 808 1197 75 0 0 chr17 29261150 29261296 -66011355 + B1_Mm SINE Alu 2 147 0 8 808 225 83 0 0 chr17 29261296 29261332 -66011319 + (A)n Simple_repeat Simple_repeat 1 36 0 8 808 1208 72 64 99 chr17 29261390 29261592 -66011059 - B2_Mm2 SINE B2 0 195 1 8 808 769 161 8 0 chr17 29261759 29261883 -66010768 - B1_Mur4 SINE Alu -15 135 11 8 808 342 229 0 118 chr17 29261779 29261898 -66010753 - MT2B LTR ERVL -337 264 160 8 808 1631 36 0 20 chr17 29261932 29262128 -66010523 - B2_Mm1a SINE B2 0 193 2 8 808 1426 79 5 35 chr17 29262131 29262329 -66010322 - B2_Mm1t SINE B2 0 193 2 8 808 1345 232 96 45 chr17 29262381 29262737 -66009914 - MTEa LTR MaLR 0 379 6 8 808 279 0 0 0 chr17 29263096 29263127 -66009524 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8 808 254 217 0 16 chr17 29263127 29263188 -66009463 + A-rich Low_complexity Low_complexity 2 61 0 8 808 294 252 71 0 chr17 29263406 29263505 -66009146 + B1_Mus1 SINE Alu 37 142 -6 8 808 336 148 0 0 chr17 29263504 29263558 -66009093 + ID_B1 SINE B4 167 220 -4 8 808 681 279 82 10 chr17 29263745 29263951 -66008700 - ID_B1 SINE B4 -1 223 3 8 808 1270 70 18 0 chr17 29263958 29264129 -66008522 - B2_Mm2 SINE B2 -20 175 2 8 808 410 325 19 31 chr17 29264197 29264359 -66008292 - RSINE1 SINE B4 -2 163 4 8 808 591 244 0 16 chr17 29264369 29264490 -66008161 - PB1D7 SINE Alu -1 119 1 8 808 330 87 0 0 chr17 29264502 29264548 -66008103 + (GA)n Simple_repeat Simple_repeat 1 46 0 8 808 284 64 0 21 chr17 29264614 29264662 -66007989 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 8 808 935 43 0 0 chr17 29264662 29264778 -66007873 - B1_Mus1 SINE Alu 0 148 33 8 808 812 92 129 15 chr17 29264860 29264992 -66007659 + B1_Mus1 SINE Alu 1 147 -1 8 808 406 285 46 46 chr17 29265005 29265157 -66007494 + B3A SINE B2 27 173 -43 8 808 281 260 40 40 chr17 29265121 29265221 -66007430 + B4A SINE B4 12 111 -181 8 808 1753 143 93 60 chr17 29265223 29265519 -66007132 - MTC LTR MaLR -9 412 87 8 808 369 0 0 0 chr17 29265519 29265560 -66007091 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 8 808 1207 57 0 0 chr17 29265563 29265704 -66006947 - B1_Mus1 SINE Alu -6 142 2 8 808 1753 143 93 60 chr17 29265704 29265737 -66006914 - MTC LTR MaLR -335 86 68 8 808 378 42 0 0 chr17 29265776 29265824 -66006827 + (ATTG)n Simple_repeat Simple_repeat 2 49 0 8 808 1169 60 27 0 chr17 29265825 29265974 -66006677 - B2_Mm2 SINE B2 -41 154 2 8 808 300 127 118 66 chr17 29265974 29266050 -66006601 - MTC LTR MaLR -340 81 2 8 808 780 181 0 0 chr17 29266050 29266156 -66006495 + ID_B1 SINE B4 119 224 0 8 808 258 266 202 0 chr17 29266438 29266547 -66006104 - LTR37B LTR ERV1 -65 403 273 8 808 207 162 0 0 chr17 29266551 29266588 -66006063 + T-rich Low_complexity Low_complexity 1 37 0 8 808 324 284 39 19 chr17 29266731 29266835 -66005816 - RCHARR1 DNA MER1_type -4 970 865 8 808 422 350 34 11 chr17 29266832 29267011 -66005640 + B4 SINE B4 98 280 -12 8 808 618 239 113 0 chr17 29267016 29267158 -66005493 - B3A SINE B2 -37 161 4 8 808 513 71 0 0 chr17 29267168 29267238 -66005413 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 8 808 859 80 0 0 chr17 29267238 29267351 -66005300 - B1_Mus1 SINE Alu -10 138 26 8 808 385 209 130 0 chr17 29267357 29267472 -66005179 - RCHARR1 DNA MER1_type -480 494 365 8 808 445 226 47 9 chr17 29267511 29267618 -66005033 - B1_Mur4 SINE Alu -7 143 33 8 808 504 296 134 48 chr17 29267617 29267848 -66004803 - RCHARR1 DNA MER1_type -622 352 102 8 808 555 271 7 36 chr17 29267982 29268120 -66004531 + B1_Mur4 SINE Alu 2 135 -15 8 808 357 62 0 0 chr17 29268643 29268691 -66003960 + (TG)n Simple_repeat Simple_repeat 2 49 0 8 808 852 120 20 0 chr17 29269402 29269552 -66003099 + (TCC)n Simple_repeat Simple_repeat 3 155 0 8 808 969 109 22 0 chr17 29269552 29269690 -66002961 - B2_Mm2 SINE B2 0 195 55 8 808 373 247 0 73 chr17 29269770 29269782 -66002869 - PB1D9 SINE Alu -1 119 108 8 808 1279 61 0 22 chr17 29269782 29269966 -66002685 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 8 808 373 247 0 73 chr17 29269966 29270049 -66002602 - PB1D9 SINE Alu -13 107 31 8 808 470 283 0 28 chr17 29270122 29270231 -66002420 + RSINE1 SINE B4 3 108 -57 8 808 192 77 0 0 chr17 29270258 29270284 -66002367 + (CA)n Simple_repeat Simple_repeat 1 26 0 8 808 187 182 204 0 chr17 29270800 29270844 -66001807 + MIR SINE MIR 46 98 -170 8 808 194 395 75 6 chr17 29271402 29271575 -66001076 - MIRb SINE MIR -11 257 73 8 808 219 255 0 56 chr17 29271720 29271774 -66000877 - L2c LINE L2 -239 3148 3098 8 808 238 26 0 49 chr17 29271941 29271982 -66000669 + (TGGGGG)n Simple_repeat Simple_repeat 2 40 0 8 808 422 253 0 0 chr17 29271988 29272067 -66000584 + ID_B1 SINE B4 121 199 -25 8 808 344 305 32 0 chr17 29272067 29272083 -66000568 + B1F SINE Alu 40 137 -12 8 808 189 0 0 0 chr17 29272583 29272604 -66000047 + (TGGGGG)n Simple_repeat Simple_repeat 3 23 0 8 808 329 261 65 0 chr17 29273645 29273737 -65998914 + PB1D10 SINE Alu 2 99 -18 8 808 309 292 47 55 chr17 29273815 29273942 -65998709 - L1M2 LINE L1 -2959 3184 3059 8 808 1412 75 38 0 chr17 29274312 29274498 -65998153 - B2_Mm2 SINE B2 -1 194 2 8 808 602 212 5 2 chr17 29275210 29275673 -65996978 + (CA)n Simple_repeat Simple_repeat 1 464 0 8 808 339 250 0 0 chr17 29275685 29275817 -65996834 + (CA)n Simple_repeat Simple_repeat 1 132 0 8 808 201 268 103 11 chr17 29275853 29275940 -65996711 - L2c LINE L2 -192 3195 3101 8 808 208 233 0 0 chr17 29277915 29277958 -65994693 + MIRb SINE MIR 56 98 -170 8 808 534 282 30 15 chr17 29278183 29278316 -65994335 + ID_B1 SINE B4 76 210 -14 8 808 445 223 87 0 chr17 29278450 29278553 -65994098 - B1_Mm SINE Alu -2 145 34 8 808 230 259 0 0 chr17 29278509 29278563 -65994088 - MT2C_Mm LTR ERVL -277 198 145 8 808 433 276 40 24 chr17 29278597 29278723 -65993928 - B3 SINE B2 -86 130 3 8 808 1886 86 22 70 chr17 29279124 29279436 -65993215 + ORR1A2 LTR MaLR 1 297 -30 8 808 251 294 36 27 chr17 29279431 29279543 -65993108 - MTD LTR MaLR -306 113 1 8 808 253 365 41 10 chr17 29279844 29279941 -65992710 - B4 SINE B4 -13 279 180 8 808 302 245 20 20 chr17 29279961 29280061 -65992590 - B4 SINE B4 -191 101 2 8 808 476 302 53 23 chr17 29280908 29281080 -65991571 - B3A SINE B2 -10 206 33 8 808 1287 34 0 0 chr17 29281767 29281913 -65990738 - B1_Mm SINE Alu -1 146 1 8 808 250 196 20 0 chr17 29282642 29282693 -65989958 + B3 SINE B2 1 52 -164 8 808 843 266 183 34 chr17 29285444 29285794 -65986857 - MTD LTR MaLR -13 406 5 8 808 297 0 0 0 chr17 29286448 29286481 -65986170 + (TG)n Simple_repeat Simple_repeat 1 33 0 8 808 470 230 44 0 chr17 29287498 29287611 -65985040 - ID_B1 SINE B4 -1 223 106 8 808 384 190 12 12 chr17 29287685 29287770 -65984881 - PB1D10 SINE Alu 0 117 33 8 808 460 369 23 0 chr17 29287695 29287871 -65984780 - ID_B1 SINE B4 -36 188 9 8 808 717 224 13 13 chr17 29287919 29288077 -65984574 - RSINE1 SINE B4 0 165 8 8 808 320 271 30 70 chr17 29288093 29288208 -65984443 - PB1 SINE Alu -5 144 12 8 808 681 325 27 23 chr17 29288302 29288563 -65984088 - B4A SINE B4 -24 268 7 8 808 1719 192 93 29 chr17 29288865 29288913 -65983738 - MTD LTR MaLR -9 410 366 8 808 1399 77 11 0 chr17 29288913 29289095 -65983556 + B2_Mm1t SINE B2 2 185 -8 8 808 1719 192 93 29 chr17 29289095 29289431 -65983220 - MTD LTR MaLR -54 365 1 8 808 277 310 51 27 chr17 29289827 29289988 -65982663 - MIR SINE MIR -89 187 10 8 808 225 0 0 0 chr17 29289992 29290017 -65982634 + (CAGA)n Simple_repeat Simple_repeat 3 27 0 8 808 751 212 29 0 chr17 29290288 29290425 -65982226 + B1_Mus2 SINE Alu 1 141 -6 8 808 1362 256 41 102 chr17 29290448 29291006 -65981645 + Lx5 LINE L1 6527 7050 0 8 808 194 228 156 42 chr17 29292354 29292450 -65980201 + MIRb SINE MIR 70 176 -92 8 808 238 342 13 0 chr17 29293053 29293129 -65979522 + MER103 DNA DNA 8 84 -82 8 808 205 222 106 45 chr17 29293958 29294024 -65978627 + L2b LINE L2 3305 3374 -1 8 808 371 321 113 7 chr17 29294064 29294347 -65978304 + L2a LINE L2 2817 3130 -296 8 808 195 371 14 43 chr17 29295258 29295396 -65977255 - MIR3 SINE MIR -44 164 31 8 808 429 20 0 0 chr17 29297963 29298013 -65974638 + (TG)n Simple_repeat Simple_repeat 1 50 0 8 808 207 0 0 0 chr17 29298013 29298035 -65974616 + (GA)n Simple_repeat Simple_repeat 1 23 0 8 808 1090 102 0 7 chr17 29298940 29299088 -65973563 + B1_Mus1 SINE Alu 1 147 -1 9 808 206 233 0 16 chr17 29299088 29299149 -65973502 + GA-rich Low_complexity Low_complexity 1 60 0 9 808 180 273 167 22 chr17 29300054 29300144 -65972507 + MIRc SINE MIR 107 209 -59 9 808 320 252 126 87 chr17 29300147 29300377 -65972274 + RLTR21 LTR ERVK 1067 1305 -267 9 808 331 283 28 19 chr17 29300516 29300624 -65972027 - B4A SINE B4 -177 115 7 9 808 238 280 26 132 chr17 29300991 29301143 -65971508 + YREP_Mm Unknown Unknown 159 294 -1518 9 808 849 108 8 15 chr17 29301016 29301148 -65971503 - B1_Mur4 SINE Alu -1 149 19 9 808 262 264 101 22 chr17 29301191 29301280 -65971371 + RMER15 LTR ERVL 12 107 -468 9 808 869 291 98 0 chr17 29301272 29301526 -65971125 + RMER15 LTR ERVL 297 575 0 9 808 660 256 15 0 chr17 29302171 29302308 -65970343 - B1_Mur1 SINE Alu -8 141 3 9 808 222 360 17 9 chr17 29303301 29303416 -65969235 - MIR3 SINE MIR -86 122 7 9 808 248 356 169 18 chr17 29303785 29303951 -65968700 - MIRb SINE MIR -43 225 35 9 808 384 203 14 0 chr17 29303959 29304033 -65968618 - ID_B1 SINE B4 -3 221 147 9 808 916 138 7 27 chr17 29307250 29307399 -65965252 - B1_Mus1 SINE Alu -2 146 1 9 808 260 309 39 18 chr17 29307444 29307567 -65965084 - MIRm SINE MIR -119 157 26 9 808 453 281 9 17 chr17 29307906 29308022 -65964629 - PB1D10 SINE Alu -1 116 2 9 808 21 36 0 0 chr17 29309143 29309171 -65963480 + GC_rich Low_complexity Low_complexity 1 28 0 9 808 356 160 0 3 chr17 29309417 29309481 -65963170 + B3 SINE B2 3 65 -133 9 808 484 101 213 25 chr17 29309641 29309763 -65962888 - B2_Mm2 SINE B2 -4 191 47 9 808 1029 89 134 0 chr17 29309830 29309987 -65962664 - B2_Mm1t SINE B2 -14 179 2 9 808 670 153 94 24 chr17 29310865 29310992 -65961659 - B1_Mur2 SINE Alu -13 136 1 9 808 939 9 0 0 chr17 29311034 29311150 -65961501 - B1_Mm SINE Alu 0 147 32 9 808 21 0 0 0 chr17 29311150 29311171 -65961480 + AT_rich Low_complexity Low_complexity 1 21 0 9 808 339 274 58 15 chr17 29311171 29311308 -65961343 - B1_Mus1 SINE Alu 0 148 6 9 808 489 266 40 0 chr17 29311179 29311315 -65961336 - ID_B1 SINE B4 -7 217 80 9 808 292 262 138 0 chr17 29311322 29311402 -65961249 - PB1 SINE Alu -2 125 35 9 808 212 342 13 0 chr17 29311449 29311525 -65961126 - ID2 SINE ID -2 81 5 9 808 438 20 0 0 chr17 29311853 29311904 -65960747 + (TG)n Simple_repeat Simple_repeat 1 51 0 9 808 472 223 0 43 chr17 29311904 29312021 -65960630 - RSINE1 SINE B4 -40 125 14 9 808 240 246 15 15 chr17 29312056 29312122 -65960529 - ID4 SINE ID -17 66 1 9 808 180 0 0 0 chr17 29314084 29314104 -65958547 + (TG)n Simple_repeat Simple_repeat 2 21 0 9 808 1145 49 7 27 chr17 29314346 29314493 -65958158 - B1_Mus1 SINE Alu 0 148 5 9 808 868 144 13 40 chr17 29314776 29314928 -65957723 + B1_Mur1 SINE Alu 1 148 -1 9 808 533 248 22 15 chr17 29315038 29315173 -65957478 + RSINE1 SINE B4 6 141 -24 9 808 1312 76 21 42 chr17 29315240 29315433 -65957218 + B2_Mm2 SINE B2 2 190 -5 9 808 1175 88 135 0 chr17 29315455 29315625 -65957026 - B2_Mm2 SINE B2 -2 193 1 9 808 217 232 112 34 chr17 29316425 29316514 -65956137 + L2a LINE L2 3305 3400 -26 9 808 1336 85 0 6 chr17 29317966 29318143 -65954508 + B2_Mm2 SINE B2 1 176 -19 9 808 225 178 0 0 chr17 29318144 29318189 -65954462 + GA-rich Low_complexity Low_complexity 1 45 0 9 808 221 95 0 87 chr17 29318208 29318254 -65954397 + C-rich Low_complexity Low_complexity 1 42 0 9 808 230 277 80 19 chr17 29320000 29320135 -65952516 + L2b LINE L2 3182 3324 -102 9 808 215 352 21 21 chr17 29320279 29320372 -65952279 - MIR SINE MIR -86 176 84 9 808 234 0 0 0 chr17 29320703 29320729 -65951922 + (TG)n Simple_repeat Simple_repeat 2 27 0 9 808 778 189 14 34 chr17 29321734 29321865 -65950786 + B1_Mur3 SINE Alu 5 137 -12 9 808 378 0 0 0 chr17 29321865 29321907 -65950744 + (CAA)n Simple_repeat Simple_repeat 1 42 0 9 808 778 189 14 34 chr17 29321907 29321923 -65950728 + B1_Mur3 SINE Alu 138 149 0 9 808 566 198 25 49 chr17 29321930 29322052 -65950599 + PB1D9 SINE Alu 2 120 0 9 808 827 85 85 0 chr17 29323123 29323252 -65949399 + B1_Mur4 SINE Alu 11 150 0 9 808 538 262 97 0 chr17 29323277 29323422 -65949229 + RSINE1 SINE B4 3 161 -4 9 808 375 277 0 0 chr17 29323426 29323663 -65948988 + (CA)n Simple_repeat Simple_repeat 1 237 0 9 808 312 127 0 0 chr17 29323705 29323760 -65948891 + (CA)n Simple_repeat Simple_repeat 1 55 0 9 808 252 0 0 0 chr17 29324444 29324472 -65948179 + (CA)n Simple_repeat Simple_repeat 2 29 0 9 808 551 274 78 26 chr17 29324647 29324838 -65947813 - MIR3 SINE MIR -4 204 4 9 808 339 303 50 10 chr17 29325518 29325618 -65947033 + MIRc SINE MIR 21 124 -144 9 808 416 281 99 0 chr17 29326507 29326628 -65946023 + MIR SINE MIR 62 194 -68 9 808 392 208 208 0 chr17 29327025 29327126 -65945525 + PB1D10 SINE Alu 1 122 -27 9 808 450 178 0 0 chr17 29327411 29327501 -65945150 + GA-rich Low_complexity Low_complexity 2 91 0 9 808 476 160 10 0 chr17 29328182 29328282 -65944369 + (TG)n Simple_repeat Simple_repeat 1 101 0 9 808 437 267 0 11 chr17 29328350 29328532 -65944119 + (TG)n Simple_repeat Simple_repeat 1 180 0 9 808 225 196 0 0 chr17 29328681 29328727 -65943924 + T-rich Low_complexity Low_complexity 1 46 0 9 808 1233 48 0 0 chr17 29328727 29328873 -65943778 - B1_Mus2 SINE Alu 0 147 2 9 808 870 146 0 0 chr17 29328932 29329076 -65943575 - URR1A DNA MER1_type 0 226 83 9 808 937 108 70 0 chr17 29329158 29329287 -65943364 - B1_Mus1 SINE Alu -9 139 2 9 808 264 262 0 15 chr17 29329297 29329363 -65943288 - MIR SINE MIR -74 188 124 9 808 532 143 0 146 chr17 29329376 29329499 -65943152 + B1_Mur1 SINE Alu 30 134 -15 9 808 345 82 0 0 chr17 29329515 29329564 -65943087 + (CA)n Simple_repeat Simple_repeat 1 49 0 9 808 222 180 160 0 chr17 29329579 29329629 -65943022 + RSINE1 SINE B4 32 89 -76 9 808 353 22 22 0 chr17 29329675 29329721 -65942930 + (CA)n Simple_repeat Simple_repeat 2 48 0 9 808 1488 88 0 5 chr17 29329759 29329954 -65942697 + B2_Mm2 SINE B2 1 194 -1 9 808 468 0 0 0 chr17 29329966 29330018 -65942633 + (GA)n Simple_repeat Simple_repeat 1 52 0 9 808 543 359 22 5 chr17 29330133 29330357 -65942294 + Tigger15a DNA TcMar 479 706 -9 9 808 895 35 59 6 chr17 29330389 29330559 -65942092 + (CA)n Simple_repeat Simple_repeat 2 180 0 9 808 1386 84 16 5 chr17 29331182 29331373 -65941278 - B2_Mm2 SINE B2 0 195 3 9 808 651 147 151 25 chr17 29331525 29331644 -65941007 - B1_Mur2 SINE Alu -15 134 1 9 808 1617 42 0 20 chr17 29331715 29331911 -65940740 + B2_Mm1t SINE B2 1 192 -1 9 808 591 133 31 0 chr17 29332016 29332114 -65940537 + B1_Mur3 SINE Alu 40 140 -9 9 808 198 0 0 0 chr17 29332145 29332167 -65940484 + (TG)n Simple_repeat Simple_repeat 2 23 0 9 808 1210 263 11 4 chr17 29332195 29332470 -65940181 + B4 SINE B4 6 282 -10 9 808 405 102 0 0 chr17 29332475 29332534 -65940117 + (CA)n Simple_repeat Simple_repeat 1 59 0 9 808 351 316 25 8 chr17 29333104 29333222 -65939429 + RSINE1 SINE B4 32 151 -14 9 808 700 143 85 26 chr17 29333268 29333443 -65939208 + B3 SINE B2 1 176 -19 9 808 1597 42 0 25 chr17 29333452 29333649 -65939002 + B2_Mm2 SINE B2 1 192 -3 9 808 695 211 60 0 chr17 29333793 29333926 -65938725 + B1_Mur4 SINE Alu 2 142 -8 9 808 21 0 0 0 chr17 29333956 29333977 -65938674 + AT_rich Low_complexity Low_complexity 1 21 0 9 808 632 309 50 50 chr17 29334150 29334429 -65938222 - B4A SINE B4 -6 286 8 9 808 748 212 7 21 chr17 29334796 29334936 -65937715 + B1_Mus2 SINE Alu 1 138 -9 9 808 781 174 0 26 chr17 29334971 29336051 -65936600 + CT-rich Low_complexity Low_complexity 1 1051 0 9 808 216 0 0 0 chr17 29336110 29336134 -65936517 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 9 808 373 214 14 0 chr17 29336149 29336219 -65936432 + ID4_ SINE ID 3 73 -10 9 808 213 226 0 0 chr17 29336788 29336841 -65935810 + G-rich Low_complexity Low_complexity 2 54 0 9 808 633 211 0 57 chr17 29337127 29337268 -65935383 - B3 SINE B2 -76 140 8 9 808 529 172 24 79 chr17 29337274 29337400 -65935251 - PB1D9 SINE Alu -1 119 1 9 808 205 186 0 0 chr17 29337426 29337469 -65935182 + T-rich Low_complexity Low_complexity 3 45 0 9 808 1113 57 50 0 chr17 29337470 29337610 -65935041 - B1_Mus2 SINE Alu 0 147 1 9 808 1157 88 11 11 chr17 29337686 29337869 -65934782 - B2_Mm1t SINE B2 -2 191 9 9 808 225 268 0 35 chr17 29337945 29338003 -65934648 - MamGypLTR1d LTR Gypsy -510 303 248 9 808 1140 248 58 96 chr17 29338308 29338422 -65934229 + MTD LTR MaLR 18 106 -313 9 808 698 255 25 59 chr17 29338422 29338626 -65934025 - B3A SINE B2 0 198 2 9 808 1140 248 58 96 chr17 29338626 29338908 -65933743 + MTD LTR MaLR 107 399 -20 9 808 197 0 71 0 chr17 29339530 29339558 -65933093 + (CAAAA)n Simple_repeat Simple_repeat 4 33 0 9 808 278 208 208 0 chr17 29341846 29341923 -65930728 + MER5A DNA MER1_type 35 127 -62 9 808 424 226 0 0 chr17 29342062 29342146 -65930505 + B3A SINE B2 1 84 -114 9 808 399 319 50 14 chr17 29342143 29342283 -65930368 + MLT1B LTR MaLR 246 390 0 9 808 365 286 63 47 chr17 29342287 29342414 -65930237 + PB1D7 SINE Alu 2 130 -18 9 808 241 136 103 132 chr17 29342428 29342496 -65930155 + PB1D10 SINE Alu 56 127 0 1 808 1029 110 20 0 chr17 29342628 29342774 -65929877 - B1_Mur4 SINE Alu -1 149 1 1 808 468 209 96 0 chr17 29342853 29342968 -65929683 - ID_B1 SINE B4 -15 209 84 1 808 303 346 45 0 chr17 29342967 29343100 -65929551 - MER2 DNA MER2_type -114 231 93 1 808 384 240 70 34 chr17 29343638 29343793 -65928858 - B3A SINE B2 -2 214 63 1 808 378 148 14 13 chr17 29343856 29343930 -65928721 + B1_Mus2 SINE Alu 61 147 0 1 808 180 0 0 0 chr17 29343979 29343999 -65928652 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 808 306 304 25 145 chr17 29344123 29344149 -65928502 - B2_Mm2 SINE B2 -4 191 167 1 808 1145 50 152 24 chr17 29344149 29344313 -65928338 + B2_Mm2 SINE B2 2 186 -9 1 808 637 245 64 9 chr17 29344313 29344486 -65928165 - B3A SINE B2 -4 194 16 1 808 1180 75 0 0 chr17 29344529 29344676 -65927975 - B1_Mus2 SINE Alu 0 147 1 1 808 476 268 0 6 chr17 29344748 29344913 -65927738 + (TG)n Simple_repeat Simple_repeat 1 164 0 1 808 241 270 32 0 chr17 29344916 29344979 -65927672 + (TATATG)n Simple_repeat Simple_repeat 6 70 0 1 808 330 283 147 21 chr17 29344982 29345220 -65927431 - B4A SINE B4 -1 291 24 1 808 282 132 0 0 chr17 29345222 29345275 -65927376 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 808 321 253 0 0 chr17 29345494 29345577 -65927074 + (CA)n Simple_repeat Simple_repeat 2 84 0 1 808 392 206 0 8 chr17 29345594 29345721 -65926930 + (CA)n Simple_repeat Simple_repeat 2 127 0 1 808 292 248 38 107 chr17 29346096 29346227 -65926424 + MIR SINE MIR 48 170 -38 1 808 626 222 13 77 chr17 29346871 29347027 -65925624 + RSINE1 SINE B4 20 165 0 1 808 180 0 0 0 chr17 29347027 29347047 -65925604 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 808 459 248 0 0 chr17 29347673 29347810 -65924841 + (CA)n Simple_repeat Simple_repeat 2 138 0 1 808 22 0 0 0 chr17 29347866 29347888 -65924763 + AT_rich Low_complexity Low_complexity 1 22 0 1 808 228 35 0 0 chr17 29347943 29347972 -65924679 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 808 348 24 0 0 chr17 29348219 29348260 -65924391 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 808 510 119 12 0 chr17 29349034 29349118 -65923533 - MTC LTR MaLR -105 316 232 1 808 1254 27 0 27 chr17 29349518 29349668 -65922983 + B1_Mus1 SINE Alu 3 148 0 1 808 226 93 18 36 chr17 29349668 29349724 -65922927 + (CAAAA)n Simple_repeat Simple_repeat 1 55 0 1 808 767 197 21 0 chr17 29349738 29349880 -65922771 + B1_Mur4 SINE Alu 3 147 -3 1 808 264 357 23 38 chr17 29349888 29350019 -65922632 + MER5B DNA MER1_type 49 177 -1 1 808 189 0 0 0 chr17 29350038 29350059 -65922592 + (G)n Simple_repeat Simple_repeat 1 21 0 1 808 244 295 133 0 chr17 29350115 29350220 -65922431 - MIRb SINE MIR -69 199 81 1 808 243 0 0 0 chr17 29350988 29351015 -65921636 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 808 224 206 53 40 chr17 29352431 29352507 -65920144 + RSINE1 SINE B4 68 144 -21 1 808 187 204 44 22 chr17 29353601 29353646 -65919005 - MIR SINE MIR -63 145 100 1 808 442 314 44 0 chr17 29353745 29353882 -65918769 - RSINE1 SINE B4 -3 162 20 1 808 285 29 0 0 chr17 29354158 29354192 -65918459 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 808 1352 83 22 0 chr17 29354193 29354373 -65918278 + B2_Mm2 SINE B2 1 184 -11 1 808 423 36 0 0 chr17 29354373 29354429 -65918222 + B1_Mm SINE Alu 92 147 0 1 808 223 137 0 38 chr17 29354429 29354482 -65918169 + (TAAA)n Simple_repeat Simple_repeat 1 51 0 1 808 722 236 73 55 chr17 29354566 29354786 -65917865 + MTE2a LTR MaLR 116 339 -40 1 808 795 110 16 0 chr17 29354810 29354937 -65917714 - B1_Mus2 SINE Alu 0 147 19 1 808 375 212 57 81 chr17 29354836 29354959 -65917692 - MT2B LTR ERVL -323 278 159 1 808 225 280 0 0 chr17 29354954 29355004 -65917647 + MTE2a LTR MaLR 307 356 -3 1 808 360 0 0 0 chr17 29355061 29355101 -65917550 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 808 286 333 56 62 chr17 29355886 29355974 -65916677 - B3 SINE B2 -39 177 88 1 808 3623 32 82 2 chr17 29355974 29356414 -65916237 + IAPLTR2_Mm LTR ERVK 1 475 0 1 808 286 333 56 62 chr17 29356414 29356469 -65916182 - B3 SINE B2 -129 87 35 1 808 617 246 65 0 chr17 29356797 29356935 -65915716 + RSINE1 SINE B4 17 163 -2 1 808 306 243 243 0 chr17 29357012 29357115 -65915536 + RSINE1 SINE B4 3 130 -35 1 808 420 173 12 36 chr17 29357155 29357239 -65915412 - B1_Mur2 SINE Alu -1 148 67 1 808 385 62 15 15 chr17 29357242 29357308 -65915343 + (CA)n Simple_repeat Simple_repeat 2 67 0 1 808 389 323 80 40 chr17 29357684 29357884 -65914767 - MamRep434 DNA TcMar -97 329 122 1 808 206 383 12 0 chr17 29358591 29358672 -65913979 - L2a LINE L2 -2 3424 3343 1 808 265 222 98 12 chr17 29358915 29358997 -65913654 + MLT2B2 LTR ERVL 1 89 -426 1 808 870 244 5 12 chr17 29359155 29359376 -65913275 - B3A SINE B2 0 216 1 1 12 1035 300 136 74 chr17 29359603 29360200 -65912451 + MTE-int LTR MaLR 52 685 -895 1 809 1289 108 11 0 chr17 29360210 29360386 -65912265 + B2_Mm1t SINE B2 2 179 -14 1 809 334 124 0 39 chr17 29360433 29360500 -65912151 + B2_Mm2 SINE B2 47 109 -107 1 809 222 37 0 0 chr17 29360533 29360560 -65912091 + (GGAA)n Simple_repeat Simple_repeat 3 29 0 1 809 1858 283 130 38 chr17 29360594 29361380 -65911271 + MTE-int LTR MaLR 714 1571 -9 1 809 283 167 15 15 chr17 29361403 29361470 -65911181 + CT-rich Low_complexity Low_complexity 3 69 0 1 809 784 187 0 0 chr17 29361471 29361610 -65911041 - B1_Mur2 SINE Alu -10 139 1 1 809 280 314 76 19 chr17 29362706 29362866 -65909785 - MIRm SINE MIR -86 176 14 1 809 255 284 54 108 chr17 29363354 29363388 -65909263 + B1F SINE Alu 18 140 -9 1 809 305 239 31 42 chr17 29363388 29363484 -65909167 + ID_B1 SINE B4 121 215 -9 1 809 1210 57 0 0 chr17 29363500 29363659 -65908992 + B2_Mm2 SINE B2 1 159 -36 1 809 225 0 0 0 chr17 29363659 29363684 -65908967 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 1 809 192 40 0 0 chr17 29363894 29363919 -65908732 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 1 809 389 303 37 0 chr17 29364116 29364225 -65908426 + PB1D7 SINE Alu 2 114 -6 1 809 480 210 193 0 chr17 29364230 29364349 -65908302 + ID_B1 SINE B4 78 219 -5 1 809 380 272 0 0 chr17 29365088 29365169 -65907482 + ID4_ SINE ID 2 82 -1 1 809 1260 99 77 6 chr17 29365184 29365366 -65907285 + B2_Mm2 SINE B2 1 195 0 1 809 223 281 67 0 chr17 29365470 29365558 -65907093 + MIR SINE MIR 99 205 -63 1 809 309 247 118 0 chr17 29367047 29367140 -65905511 + B1F SINE Alu 46 149 0 1 809 1282 49 0 0 chr17 29367160 29367324 -65905327 + B2_Mm2 SINE B2 1 164 -31 1 809 380 181 42 0 chr17 29367330 29367402 -65905249 + ID4 SINE ID 8 82 -1 1 809 1166 28 7 34 chr17 29367621 29367633 -65905018 - B1_Mus2 SINE Alu -1 146 139 1 809 207 0 0 0 chr17 29367633 29367656 -65904995 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 1 809 1166 28 7 34 chr17 29367656 29367792 -65904859 - B1_Mus2 SINE Alu -9 138 2 1 809 194 300 198 17 chr17 29368578 29368950 -65903701 + L2b LINE L2 2655 3086 -289 1 809 413 234 37 140 chr17 29368996 29369160 -65903491 + B4 SINE B4 77 223 -69 1 809 856 128 0 48 chr17 29369020 29369167 -65903484 + B1_Mur2 SINE Alu 10 149 0 1 809 285 259 24 65 chr17 29369181 29369305 -65903346 + PB1D7 SINE Alu 1 119 -1 1 809 218 323 20 29 chr17 29369617 29369719 -65902932 + MIR SINE MIR 30 130 -78 1 809 232 304 29 29 chr17 29369818 29369923 -65902728 + B4 SINE B4 44 148 -144 1 809 210 37 0 0 chr17 29369923 29369950 -65902701 + (C)n Simple_repeat Simple_repeat 1 27 0 1 809 324 0 0 0 chr17 29370344 29370380 -65902271 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 809 274 263 70 10 chr17 29371290 29371390 -65901261 - MIRc SINE MIR -65 203 98 1 809 404 178 20 91 chr17 29371602 29371701 -65900950 - PB1D9 SINE Alu 0 120 29 1 809 859 193 0 0 chr17 29371737 29371877 -65900774 - B1_Mur2 SINE Alu -9 140 1 1 809 32 57 0 0 chr17 29375072 29375125 -65897526 + GC_rich Low_complexity Low_complexity 1 53 0 1 809 220 227 0 0 chr17 29375151 29375195 -65897456 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 809 768 174 27 14 chr17 29376570 29376716 -65895935 - B1_Mur4 SINE Alu 0 150 3 1 809 314 86 35 0 chr17 29376726 29376784 -65895867 + (TTTG)n Simple_repeat Simple_repeat 2 61 0 1 809 1156 75 0 27 chr17 29376786 29376936 -65895715 - B1_Mus2 SINE Alu 0 147 2 1 809 653 95 0 62 chr17 29377187 29377299 -65895352 + B1_Mur4 SINE Alu 46 150 0 1 809 829 67 217 0 chr17 29377864 29377984 -65894667 + B1_Mus2 SINE Alu 2 147 0 1 809 181 57 28 28 chr17 29378728 29378764 -65893887 + (TCCCC)n Simple_repeat Simple_repeat 3 38 0 1 809 887 87 1 6 chr17 29379018 29379162 -65893489 + B2_Mm2 SINE B2 3 141 -52 1 809 230 271 91 127 chr17 29379162 29379183 -65893468 + B4A SINE B4 3 161 -131 1 809 342 0 0 0 chr17 29379552 29379590 -65893061 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 809 226 285 133 11 chr17 29379887 29379992 -65892659 + L2a LINE L2 3266 3380 -46 1 809 525 230 379 0 chr17 29380897 29381058 -65891593 - ID_B1 SINE B4 0 224 3 1 809 412 209 12 12 chr17 29381069 29381171 -65891480 - PB1D7 SINE Alu -31 118 13 1 809 353 244 13 0 chr17 29381436 29381514 -65891137 - ID4_ SINE ID -4 79 1 1 809 213 39 0 0 chr17 29382477 29382503 -65890148 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 809 732 130 171 0 chr17 29383251 29383374 -65889277 + B1_Mus1 SINE Alu 5 148 0 1 809 24 0 0 0 chr17 29384019 29384043 -65888608 + AT_rich Low_complexity Low_complexity 1 24 0 1 809 319 138 12 34 chr17 29384057 29384123 -65888528 - B2_Mm2 SINE B2 -83 115 46 1 809 1123 102 0 18 chr17 29384177 29384346 -65888305 - B2_Mm2 SINE B2 -26 169 4 1 809 278 259 100 7 chr17 29384347 29384487 -65888164 + RMER17C LTR ERVK 121 273 -137 1 809 738 205 61 50 chr17 29384513 29384693 -65887958 - B3A SINE B2 -15 183 2 1 809 788 237 152 10 chr17 29387116 29387403 -65885248 + MTD LTR MaLR 61 398 -21 1 809 645 173 60 0 chr17 29387605 29387738 -65884913 + B1_Mur1 SINE Alu 9 149 0 1 809 1330 181 86 13 chr17 29389850 29390152 -65882499 - MTC LTR MaLR -97 324 1 1 809 2514 86 42 116 chr17 29390221 29390722 -65881929 + RMER16 LTR ERVK 70 533 0 1 809 260 220 0 0 chr17 29391263 29391313 -65881338 - RSINE1 SINE B4 -108 57 8 1 809 552 163 58 58 chr17 29391366 29391503 -65881148 + B1_Mus1 SINE Alu 1 137 -11 1 809 6013 53 29 2 chr17 29391880 29392667 -65879984 + RLTR13C2 LTR ERVK 1 808 0 1 809 367 258 109 32 chr17 29394124 29394280 -65878371 + MER20 DNA MER1_type 52 219 0 1 809 199 323 27 11 chr17 29395107 29395225 -65877426 + L2a LINE L2 3254 3425 -1 1 809 1068 88 0 0 chr17 29395835 29395972 -65876679 + B1_Mus2 SINE Alu 2 138 -9 1 809 860 132 7 0 chr17 29396193 29396329 -65876322 + B1_Mur4 SINE Alu 14 150 0 1 809 328 204 26 120 chr17 29396437 29396588 -65876063 + PB1D9 SINE Alu 1 132 -17 1 809 1141 15 0 0 chr17 29397183 29397316 -65875335 + B1_Mus2 SINE Alu 2 134 -13 1 809 215 303 48 39 chr17 29397670 29397773 -65874878 + L2a LINE L2 2741 2844 -575 1 809 191 240 80 0 chr17 29398011 29398061 -65874590 + L2a LINE L2 3343 3396 -30 1 809 707 102 2 29 chr17 29398077 29398214 -65874437 - B1_Mur4 SINE Alu 0 150 23 1 809 344 192 14 0 chr17 29398393 29398466 -65874185 + ID_B1 SINE B4 97 170 -54 1 809 370 231 23 13 chr17 29398519 29398619 -65874032 + ID_B1 SINE B4 1 100 -192 1 809 460 241 72 98 chr17 29399329 29399505 -65873146 + B3A SINE B2 5 179 -16 1 809 1301 50 50 6 chr17 29399505 29399685 -65872966 + B2_Mm2 SINE B2 2 189 -6 1 809 369 241 72 98 chr17 29399685 29399701 -65872950 + B2_Mm2 SINE B2 180 192 -3 1 809 30 0 0 0 chr17 29400173 29400203 -65872448 + AT_rich Low_complexity Low_complexity 1 30 0 1 809 379 217 0 21 chr17 29400219 29400313 -65872338 - PB1D10 SINE Alu -20 97 6 1 809 537 216 9 0 chr17 29400245 29400356 -65872295 - ID_B1 SINE B4 -70 154 43 1 809 207 100 0 0 chr17 29400554 29400584 -65872067 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 1 809 304 243 0 104 chr17 29401195 29401220 -65871431 - MT2B2 LTR ERVL -320 264 167 1 809 538 141 0 0 chr17 29401220 29401305 -65871346 - PB1D9 SINE Alu -34 86 2 1 809 187 264 92 71 chr17 29401311 29401409 -65871242 - MIRb SINE MIR -81 187 88 1 809 491 205 48 57 chr17 29401479 29401603 -65871048 + B1_Mus1 SINE Alu 3 125 -23 1 809 461 348 24 70 chr17 29401612 29401825 -65870826 + B4A SINE B4 1 203 -89 1 809 392 267 67 22 chr17 29402138 29402156 -65870495 - B3A SINE B2 0 198 182 1 809 207 0 0 0 chr17 29402156 29402179 -65870472 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 809 392 267 67 22 chr17 29402179 29402294 -65870357 - B3A SINE B2 -17 181 59 1 809 386 331 47 0 chr17 29402369 29402517 -65870134 + RSINE1 SINE B4 3 157 -8 1 809 288 0 0 0 chr17 29402655 29402687 -65869964 + (T)n Simple_repeat Simple_repeat 1 32 0 1 809 1124 54 0 13 chr17 29402687 29402836 -65869815 - B1_Mus2 SINE Alu 0 147 1 1 809 21 0 0 0 chr17 29402845 29402866 -65869785 + AT_rich Low_complexity Low_complexity 1 21 0 1 809 204 359 0 0 chr17 29403158 29403222 -65869429 + C-rich Low_complexity Low_complexity 5 68 0 1 809 1405 58 16 16 chr17 29403357 29403549 -65869102 + B2_Mm2 SINE B2 2 193 -2 1 809 180 0 0 0 chr17 29403959 29403979 -65868672 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1 809 1055 91 109 0 chr17 29403979 29404154 -65868497 - B2_Mm2 SINE B2 0 195 2 1 809 216 0 0 0 chr17 29404238 29404262 -65868389 + (T)n Simple_repeat Simple_repeat 1 24 0 1 809 1083 81 0 0 chr17 29404262 29404410 -65868241 - B1_Mus1 SINE Alu 0 148 1 1 809 423 51 0 0 chr17 29404711 29404770 -65867881 - B1_Mus2 SINE Alu -1 146 88 1 809 435 245 20 0 chr17 29404776 29404878 -65867773 - B3A SINE B2 -92 106 3 1 809 512 283 35 3 chr17 29405152 29405291 -65867360 + B3A SINE B2 1 143 -52 1 809 323 78 0 19 chr17 29405308 29405360 -65867291 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 809 213 94 0 0 chr17 29405617 29405649 -65867002 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 809 22 0 0 0 chr17 29405738 29405760 -65866891 + GC_rich Low_complexity Low_complexity 1 22 0 1 809 23 92 0 0 chr17 29405957 29406022 -65866629 + GC_rich Low_complexity Low_complexity 1 65 0 1 809 25 0 0 0 chr17 29406278 29406303 -65866348 + AT_rich Low_complexity Low_complexity 1 25 0 1 809 189 0 0 0 chr17 29407187 29407208 -65865443 + (TTGG)n Simple_repeat Simple_repeat 2 22 0 1 809 523 156 165 0 chr17 29407214 29407323 -65865328 - B1_Mus2 SINE Alu -19 128 2 1 809 317 230 27 149 chr17 29407809 29407957 -65864694 + ID_B1 SINE B4 1 130 -94 1 809 562 239 0 42 chr17 29408505 29408623 -65864028 - B3 SINE B2 -103 113 1 1 809 548 241 52 50 chr17 29408626 29408827 -65863824 - B3A SINE B2 -1 215 3 1 809 483 206 90 97 chr17 29409130 29409275 -65863376 - ID_B1 SINE B4 0 224 81 1 809 216 0 0 0 chr17 29409299 29409323 -65863328 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1 809 1143 70 6 0 chr17 29409323 29409481 -65863170 - B2_Mm1a SINE B2 -34 159 1 1 809 814 95 0 8 chr17 29409675 29409802 -65862849 + B1_Mus2 SINE Alu 1 126 -21 1 809 21 0 0 0 chr17 29409900 29409921 -65862730 + AT_rich Low_complexity Low_complexity 1 21 0 1 809 429 277 10 0 chr17 29409956 29410057 -65862594 - B1_Mur1 SINE Alu -29 120 19 1 809 355 291 0 0 chr17 29410179 29410258 -65862393 + RSINE1 SINE B4 3 81 -84 1 809 381 73 10 172 chr17 29410445 29410496 -65862155 + L1Md_F2 LINE L1 6499 6549 -33 1 809 1534 26 5 20 chr17 29410496 29410692 -65861959 + B2_Mm1t SINE B2 1 193 0 1 809 381 73 10 172 chr17 29410692 29410739 -65861912 + L1Md_F2 LINE L1 6550 6581 -1 1 809 369 0 0 0 chr17 29411346 29411387 -65861264 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 809 941 129 7 26 chr17 29411561 29411712 -65860939 + B1_Mur3 SINE Alu 1 148 -1 1 809 557 227 30 0 chr17 29411933 29412065 -65860586 - RSINE1 SINE B4 -18 147 12 1 809 659 247 14 0 chr17 29412601 29412747 -65859904 - B1_Mur2 SINE Alu -1 148 1 1 809 279 0 0 0 chr17 29413057 29413088 -65859563 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 809 996 103 0 0 chr17 29413092 29413228 -65859423 - B1_Mus1 SINE Alu -11 137 2 1 809 740 266 19 0 chr17 29413228 29413382 -65859269 - B3A SINE B2 -34 164 8 1 809 186 43 0 0 chr17 29413422 29413445 -65859206 + (T)n Simple_repeat Simple_repeat 1 23 0 1 809 1135 34 14 7 chr17 29413448 29413594 -65859057 - B1_Mm SINE Alu 0 147 1 1 809 471 291 55 0 chr17 29413601 29413728 -65858923 - ID_B1 SINE B4 -7 217 84 1 809 244 337 21 0 chr17 29414269 29414364 -65858287 + Tigger7 DNA MER2_type 45 141 -2350 1 809 475 254 119 14 chr17 29414448 29414734 -65857917 + Tigger7 DNA MER2_type 2139 2491 0 1 809 650 190 209 0 chr17 29415344 29415507 -65857144 - ID_B1 SINE B4 -27 197 1 1 809 615 269 36 0 chr17 29415878 29416045 -65856606 - B3 SINE B2 -15 201 29 1 809 463 233 135 0 chr17 29416143 29416276 -65856375 - ID_B1 SINE B4 -73 151 1 1 809 401 249 34 52 chr17 29416671 29416848 -65855803 - L1M4 LINE L1 -377 5803 5606 1 809 1312 70 26 26 chr17 29416848 29417039 -65855612 - B2_Mm2 SINE B2 -3 192 2 1 809 401 233 14 70 chr17 29417039 29417067 -65855584 - L1M4 LINE L1 -579 5605 5580 1 809 758 81 186 0 chr17 29417070 29417194 -65855457 + B1_Mus2 SINE Alu 1 147 0 1 809 289 249 118 51 chr17 29417332 29417527 -65855124 + L1M5 LINE L1 5254 5461 -983 1 809 1479 62 16 0 chr17 29417647 29417839 -65854812 + B2_Mm2 SINE B2 1 195 0 1 809 1099 65 0 0 chr17 29418199 29418337 -65854314 + B1_Mus2 SINE Alu 1 138 -9 1 809 1270 67 44 6 chr17 29418358 29418538 -65854113 + B2_Mm2 SINE B2 2 188 -7 1 809 522 219 9 0 chr17 29418538 29418652 -65853999 - PB1D9 SINE Alu -4 116 2 1 809 217 319 132 0 chr17 29418709 29418800 -65853851 + PB1 SINE Alu 23 125 -2 1 809 229 243 67 108 chr17 29419878 29419998 -65852653 - PB1D10 SINE Alu -1 116 2 1 809 266 211 11 0 chr17 29420087 29420151 -65852500 - MIRc SINE MIR -93 169 103 1 809 204 143 40 54 chr17 29420688 29420762 -65851889 + (TG)n Simple_repeat Simple_repeat 1 73 0 1 809 465 281 43 50 chr17 29420767 29420928 -65851723 - RSINE1 SINE B4 0 165 6 1 809 1004 103 0 14 chr17 29421485 29421632 -65851019 + B1_Mus1 SINE Alu 2 146 -2 1 809 194 0 0 37 chr17 29421633 29421660 -65850991 + (CAAAAA)n Simple_repeat Simple_repeat 5 30 0 1 809 440 300 58 34 chr17 29421689 29421896 -65850755 + Lx8 LINE L1 7115 7326 -147 1 809 336 143 0 0 chr17 29422114 29422170 -65850481 + (A)n Simple_repeat Simple_repeat 1 56 0 1 809 246 315 0 36 chr17 29423158 29423326 -65849325 + (CACTG)n Simple_repeat Simple_repeat 5 166 0 1 809 189 147 0 0 chr17 29423784 29423818 -65848833 + (TTTC)n Simple_repeat Simple_repeat 2 35 0 1 809 1111 57 0 0 chr17 29423830 29423970 -65848681 - B1_Mus1 SINE Alu -8 140 1 1 809 546 258 24 42 chr17 29424005 29424171 -65848480 + RSINE1 SINE B4 3 165 0 1 809 25 0 0 0 chr17 29424187 29424212 -65848439 + AT_rich Low_complexity Low_complexity 1 25 0 1 809 270 0 0 0 chr17 29424275 29424305 -65848346 + (ATTG)n Simple_repeat Simple_repeat 2 31 0 1 809 558 234 49 14 chr17 29424305 29424438 -65848213 - B1_Mur1 SINE Alu -10 139 1 1 809 21 0 0 0 chr17 29424443 29424464 -65848187 + AT_rich Low_complexity Low_complexity 1 21 0 1 809 608 233 45 32 chr17 29424470 29424625 -65848026 + B4 SINE B4 1 157 -135 1 809 192 234 0 0 chr17 29424807 29424854 -65847797 + (TATG)n Simple_repeat Simple_repeat 2 48 0 1 809 839 184 0 11 chr17 29424860 29425036 -65847615 + (TATATG)n Simple_repeat Simple_repeat 4 177 0 1 809 251 286 152 10 chr17 29425039 29425138 -65847513 - PB1D10 SINE Alu -3 114 2 1 809 343 298 57 103 chr17 29425232 29425494 -65847157 - MLT1B LTR MaLR -2 388 139 1 809 306 247 0 115 chr17 29425746 29425833 -65846818 + PB1D10 SINE Alu 24 100 -17 1 809 273 57 0 0 chr17 29425839 29425874 -65846777 + (TCTCCC)n Simple_repeat Simple_repeat 3 37 0 1 809 322 305 141 7 chr17 29425884 29426026 -65846625 - RSINE1 SINE B4 -4 161 1 1 809 1166 68 0 0 chr17 29426065 29426213 -65846438 - B1_Mus1 SINE Alu 0 148 1 1 809 1251 97 32 0 chr17 29426229 29426415 -65846236 - B2_Mm1t SINE B2 0 193 2 1 809 445 232 116 0 chr17 29426453 29426565 -65846086 + B1_Mur1 SINE Alu 18 142 -7 1 809 758 181 14 14 chr17 29426577 29426717 -65845934 + B1_Mur3 SINE Alu 9 148 -1 1 809 669 206 171 0 chr17 29426733 29426908 -65845743 + B3 SINE B2 4 208 -8 1 809 640 299 52 5 chr17 29427265 29427477 -65845174 + MER82 DNA MER2_type 143 364 -289 1 809 265 295 105 0 chr17 29427480 29427575 -65845076 - L1MC1 LINE L1 -5 6328 6224 1 809 470 237 8 26 chr17 29427873 29427990 -65844661 - PB1D10 SINE Alu -1 116 2 1 809 1010 38 8 0 chr17 29429070 29429203 -65843448 - B1_Mus1 SINE Alu 0 148 15 1 809 387 250 47 87 chr17 29429072 29429221 -65843430 - B4A SINE B4 -68 224 82 1 809 225 0 0 0 chr17 29429226 29429251 -65843400 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 809 523 43 0 0 chr17 29429259 29429329 -65843322 - B1_Mur4 SINE Alu -10 140 71 1 809 1315 66 55 0 chr17 29429701 29429883 -65842768 - B2_Mm1a SINE B2 -1 192 1 1 809 816 153 21 0 chr17 29429887 29430031 -65842620 - B1_Mus2 SINE Alu 0 147 1 1 809 180 0 0 0 chr17 29430711 29430731 -65841920 + (CTCTG)n Simple_repeat Simple_repeat 4 23 0 1 809 308 204 189 22 chr17 29431550 29431640 -65841011 - ORR1D2 LTR MaLR -1 369 265 1 809 559 194 111 7 chr17 29431654 29431789 -65840862 - ORR1D2 LTR MaLR -219 151 3 1 809 181 257 51 63 chr17 29431899 29431978 -65840673 - MIRc SINE MIR -120 148 71 1 809 1268 91 16 5 chr17 29432278 29432465 -65840186 - B2_Mm2 SINE B2 -5 190 2 1 809 330 368 8 8 chr17 29432472 29432598 -65840053 - RSINE1 SINE B4 -36 129 4 1 809 452 246 52 0 chr17 29432920 29433054 -65839597 + ID_B1 SINE B4 84 224 0 1 809 487 204 131 19 chr17 29433055 29433195 -65839456 + B3A SINE B2 18 177 -21 1 809 777 188 35 0 chr17 29433195 29433339 -65839312 - B1_Mur2 SINE Alu 0 149 1 1 809 487 244 95 69 chr17 29433339 29433378 -65839273 + B3A SINE B2 161 195 -3 1 809 568 235 103 32 chr17 29435039 29435224 -65837427 + B3A SINE B2 1 198 0 1 809 215 370 21 14 chr17 29435227 29435367 -65837284 + L4 LINE RTE 1675 1815 -214 1 809 375 233 126 15 chr17 29435371 29435395 -65837256 + ID_B1 SINE B4 73 222 -2 1 809 473 162 180 0 chr17 29435395 29435506 -65837145 + B1_Mur2 SINE Alu 17 147 -2 1 809 240 280 50 0 chr17 29437353 29437453 -65835198 - PB1D7 SINE Alu -15 105 1 1 809 1506 37 21 0 chr17 29437503 29437694 -65834957 - B2_Mm2 SINE B2 0 195 1 1 809 305 277 61 18 chr17 29437697 29437811 -65834840 - PB1D7 SINE Alu 0 120 2 1 809 198 0 0 0 chr17 29437855 29437877 -65834774 + (CACAG)n Simple_repeat Simple_repeat 2 23 0 1 809 351 314 34 74 chr17 29437912 29438060 -65834591 + PB1D10 SINE Alu 3 144 -5 1 809 610 195 39 0 chr17 29438909 29439037 -65833614 + B1_Mur1 SINE Alu 7 139 -10 1 809 299 276 13 0 chr17 29439071 29439147 -65833504 + ID4_ SINE ID 5 81 -2 1 809 636 170 101 22 chr17 29439698 29439836 -65832815 - B1_Mur1 SINE Alu 0 149 1 1 809 632 186 25 0 chr17 29441217 29441335 -65831316 - B1_Mur2 SINE Alu -1 148 28 1 809 219 139 0 0 chr17 29441488 29441524 -65831127 + (CAGG)n Simple_repeat Simple_repeat 1 36 0 1 809 662 250 14 7 chr17 29443696 29443841 -65828810 - B1_Mur1 SINE Alu -2 147 2 1 809 363 287 74 44 chr17 29443957 29444092 -65828559 - ID_B1 SINE B4 -1 223 85 1 809 204 40 0 0 chr17 29444287 29444312 -65828339 + (CGAG)n Simple_repeat Simple_repeat 2 26 0 1 809 274 65 47 31 chr17 29444571 29444635 -65828016 + (TCTCCC)n Simple_repeat Simple_repeat 1 65 0 1 809 1187 75 118 0 chr17 29445608 29445769 -65826882 - B2_Mm2 SINE B2 -14 181 2 1 809 621 308 123 83 chr17 29445779 29445844 -65826807 - L1MC1 LINE L1 0 6333 6253 1 809 242 73 24 0 chr17 29445844 29445885 -65826766 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 809 621 308 123 83 chr17 29445885 29446095 -65826556 - L1MC1 LINE L1 -81 6252 6033 1 809 515 186 181 24 chr17 29446095 29446222 -65826429 - B1_Mur2 SINE Alu -1 148 2 1 809 621 308 123 83 chr17 29446222 29446586 -65826065 - L1MC1 LINE L1 -301 6032 5668 1 809 1235 48 0 13 chr17 29446712 29446861 -65825790 - B1_Mus2 SINE Alu 0 147 1 1 809 766 349 76 15 chr17 29446869 29447265 -65825386 - Lx8 LINE L1 0 7473 7054 1 809 551 297 103 5 chr17 29447373 29447708 -65824943 - L1MC1 LINE L1 -803 5530 5162 1 809 333 279 77 0 chr17 29447728 29447832 -65824819 - PB1D7 SINE Alu -4 116 5 1 809 449 270 8 34 chr17 29447919 29448038 -65824613 - B3 SINE B2 -49 167 52 1 809 562 253 139 23 chr17 29448007 29448241 -65824410 - ID_B1 SINE B4 -15 277 37 1 809 1805 182 104 16 chr17 29448242 29448627 -65824024 - MTD LTR MaLR 0 419 1 1 809 184 173 58 0 chr17 29448931 29448983 -65823668 + GA-rich Low_complexity Low_complexity 1 55 0 1 809 449 267 39 55 chr17 29449079 29449206 -65823445 - B3 SINE B2 -17 199 75 1 809 322 279 77 0 chr17 29449321 29449425 -65823226 + PB1D7 SINE Alu 5 116 -4 1 809 28 29 0 0 chr17 29449494 29449529 -65823122 + AT_rich Low_complexity Low_complexity 1 35 0 1 809 796 201 177 6 chr17 29449851 29450026 -65822625 - B3 SINE B2 -7 209 5 1 809 705 273 51 0 chr17 29450035 29450211 -65822440 - B3A SINE B2 -11 187 3 1 809 923 165 16 11 chr17 29450322 29450486 -65822165 + B2_Mm2 SINE B2 1 165 -30 1 809 387 118 0 29 chr17 29450486 29450556 -65822095 - L1Md_F2 LINE L1 0 6582 6515 1 809 923 165 16 11 chr17 29450556 29450575 -65822076 + B2_Mm2 SINE B2 166 184 -11 1 809 25 0 0 0 chr17 29450591 29450616 -65822035 + AT_rich Low_complexity Low_complexity 1 25 0 1 809 1414 148 8 12 chr17 29451065 29451324 -65821327 - Lx3B LINE L1 -877 6096 5839 1 809 519 238 78 19 chr17 29451466 29451620 -65821031 + RSINE1 SINE B4 3 165 0 1 809 976 62 108 0 chr17 29451646 29451776 -65820875 + B1_Mm SINE Alu 1 144 -3 1 809 597 162 0 0 chr17 29452427 29452538 -65820113 + (TG)n Simple_repeat Simple_repeat 2 112 0 1 809 311 255 227 12 chr17 29452792 29452942 -65819709 - ORR1E LTR MaLR -23 336 152 1 809 194 0 39 0 chr17 29452942 29452968 -65819683 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 809 311 255 227 12 chr17 29452968 29452980 -65819671 - ORR1E LTR MaLR -208 151 140 1 809 898 169 35 0 chr17 29452987 29453129 -65819522 + B1_Mus2 SINE Alu 1 147 0 1 809 257 270 141 48 chr17 29453567 29453773 -65818878 - ORR1E LTR MaLR -36 323 99 1 809 1178 68 7 0 chr17 29454207 29454353 -65818298 + B1_Mus1 SINE Alu 2 148 0 1 809 288 0 0 0 chr17 29454353 29454385 -65818266 + (A)n Simple_repeat Simple_repeat 1 32 0 1 809 230 222 141 16 chr17 29454568 29454696 -65817955 + ORR1B1-int LTR MaLR 611 754 -755 1 809 440 168 25 101 chr17 29454582 29454701 -65817950 + MT2B LTR ERVL 155 264 -337 1 809 927 48 0 38 chr17 29454608 29454739 -65817912 + B1_Mus1 SINE Alu 21 146 -2 1 809 324 94 0 0 chr17 29454740 29454793 -65817858 + (TATG)n Simple_repeat Simple_repeat 3 55 0 1 809 366 91 0 22 chr17 29454794 29454860 -65817791 - B2_Mm2 SINE B2 -107 109 47 1 809 1327 69 46 6 chr17 29454907 29455082 -65817569 - B2_Mm2 SINE B2 -13 182 1 1 809 23 0 0 0 chr17 29455084 29455107 -65817544 + AT_rich Low_complexity Low_complexity 1 23 0 1 809 657 171 14 202 chr17 29455258 29455471 -65817180 + B2_Mm2 SINE B2 2 174 -21 1 809 323 203 0 0 chr17 29455616 29455680 -65816971 + B3A SINE B2 1 64 -134 1 809 290 209 83 26 chr17 29456455 29456554 -65816097 - MIRc SINE MIR -86 190 90 1 809 181 291 27 72 chr17 29457228 29457339 -65815312 + L4 LINE RTE 1731 1836 -193 1 809 275 0 29 0 chr17 29457366 29457401 -65815250 + (TGG)n Simple_repeat Simple_repeat 2 37 0 1 809 536 93 0 0 chr17 29457808 29457883 -65814768 + BC1_Mm scRNA scRNA 2 76 -76 1 809 403 254 22 60 chr17 29457883 29457942 -65814709 + ID_B1 SINE B4 2 130 -94 1 809 297 0 0 0 chr17 29458263 29458296 -65814355 + (GA)n Simple_repeat Simple_repeat 2 34 0 1 809 1071 77 28 0 chr17 29460217 29460360 -65812291 + B1_Mm SINE Alu 1 147 0 1 809 281 186 57 0 chr17 29460388 29460458 -65812193 + RSINE1 SINE B4 4 77 -88 1 809 1262 48 0 0 chr17 29460479 29460626 -65812025 + B1_Mus1 SINE Alu 2 148 0 1 809 226 176 39 19 chr17 29461204 29461256 -65811395 - B1_Mus2 SINE Alu -70 77 25 1 809 1233 89 0 0 chr17 29461460 29461629 -65811022 + B2_Mm2 SINE B2 1 169 -26 1 809 596 118 43 0 chr17 29461653 29461746 -65810905 - B2_Mm2 SINE B2 -98 97 1 1 809 1097 102 7 0 chr17 29461798 29461945 -65810706 + B1_Mus1 SINE Alu 1 148 0 1 809 4647 25 0 6 chr17 29461947 29462473 -65810178 + L1Md_F3 LINE L1 6048 6570 -14 1 809 180 0 0 0 chr17 29462491 29462511 -65810140 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 1 809 219 146 0 0 chr17 29465200 29465241 -65807410 + (TTTTC)n Simple_repeat Simple_repeat 4 44 0 1 809 1125 70 28 0 chr17 29465241 29465384 -65807267 - B1_Mus2 SINE Alu 0 147 1 1 809 550 120 21 11 chr17 29466508 29466601 -65806050 - B1_Mus2 SINE Alu 0 147 54 1 809 317 335 48 30 chr17 29466790 29466956 -65805695 - L1MB7 LINE L1 -79 6105 5937 1 809 258 245 0 0 chr17 29467031 29467080 -65805571 - RSINE1 SINE B4 -113 52 4 1 809 680 325 49 45 chr17 29467205 29467469 -65805182 - B4A SINE B4 -4 288 24 1 809 211 248 122 87 chr17 29467368 29467483 -65805168 - B3A SINE B2 -79 119 1 1 809 485 238 155 7 chr17 29467497 29467645 -65805006 - L1M4 LINE L1 -2168 3978 3809 1 809 961 53 8 8 chr17 29467928 29468061 -65804590 + (GGGAGA)n Simple_repeat Simple_repeat 2 134 0 1 809 207 69 0 0 chr17 29468061 29468090 -65804561 + (CAGG)n Simple_repeat Simple_repeat 1 29 0 1 809 297 75 0 0 chr17 29468452 29468492 -65804159 - B1_Mus2 SINE Alu -107 40 1 1 809 1291 167 99 19 chr17 29468492 29468752 -65803899 - RLTR25A LTR ERVK -807 296 16 1 809 320 221 25 38 chr17 29469797 29469877 -65802774 - RSINE1 SINE B4 -85 80 2 1 809 180 0 0 0 chr17 29470396 29470416 -65802235 + (TCC)n Simple_repeat Simple_repeat 2 21 0 1 809 316 187 138 32 chr17 29472653 29472747 -65799904 - PB1D10 SINE Alu -2 115 12 1 809 906 82 67 0 chr17 29472762 29472897 -65799754 - B1_Mur4 SINE Alu -1 149 6 1 809 540 231 43 49 chr17 29472767 29472931 -65799720 - B4 SINE B4 -72 220 58 1 809 1120 101 12 6 chr17 29474474 29474643 -65798008 + B2_Mm1t SINE B2 2 171 -22 1 809 342 134 158 56 chr17 29474680 29474798 -65797853 + B2_Mm2 SINE B2 47 192 -1 1 809 320 361 15 15 chr17 29475035 29475170 -65797481 - Charlie8 DNA MER1_type -2220 208 74 1 809 261 0 0 0 chr17 29475372 29475401 -65797250 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 809 198 0 0 0 chr17 29478400 29478422 -65794229 + (G)n Simple_repeat Simple_repeat 1 22 0 1 809 693 265 6 24 chr17 29480301 29480467 -65792184 - RSINE1 SINE B4 0 165 3 1 809 506 140 53 5 chr17 29480478 29480581 -65792070 - PB1D9 SINE Alu -21 129 26 1 809 529 303 13 27 chr17 29480614 29480763 -65791888 - RSINE1 SINE B4 -16 149 3 1 809 567 50 0 24 chr17 29481523 29481605 -65791046 - B1_Mur4 SINE Alu 0 150 71 1 809 264 317 15 61 chr17 29481633 29481764 -65790887 - RSINE1 SINE B4 -40 125 1 1 809 1758 16 0 0 chr17 29481775 29481968 -65790683 - B2_Mm1a SINE B2 0 193 1 1 809 1204 48 0 7 chr17 29483127 29483274 -65789377 - B1_Mus1 SINE Alu -1 147 2 1 809 22 0 0 0 chr17 29484513 29484535 -65788116 + GC_rich Low_complexity Low_complexity 1 22 0 1 809 192 152 0 0 chr17 29485603 29485636 -65787015 + (TATTG)n Simple_repeat Simple_repeat 5 37 0 1 809 329 205 12 60 chr17 29485747 29485830 -65786821 + PB1D10 SINE Alu 7 85 -32 1 809 261 0 0 0 chr17 29485954 29485983 -65786668 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 809 2727 57 36 0 chr17 29486373 29486707 -65785944 + ORR1A1 LTR MaLR 1 346 0 1 809 575 209 306 41 chr17 29486739 29486909 -65785742 - B3 SINE B2 0 216 2 1 809 231 83 229 0 chr17 29487028 29487076 -65785575 + B1_Mus2 SINE Alu 88 146 -1 1 809 427 227 57 25 chr17 29487363 29487485 -65785166 - B1_Mur2 SINE Alu -1 148 23 1 809 3929 159 88 34 chr17 29487602 29488334 -65784317 + RLTR13D6 LTR ERVK 1 772 -130 1 809 1120 49 21 0 chr17 29488334 29488476 -65784175 + B1_Mus2 SINE Alu 2 146 -1 1 809 3929 159 88 34 chr17 29488476 29488580 -65784071 + RLTR13D6 LTR ERVK 773 883 -19 1 809 23 33 0 0 chr17 29488804 29488834 -65783817 + AT_rich Low_complexity Low_complexity 1 30 0 1 809 1132 75 0 0 chr17 29488834 29488980 -65783671 + B1_Mus1 SINE Alu 1 146 -2 1 809 207 0 0 0 chr17 29488980 29489003 -65783648 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1 809 423 0 0 0 chr17 29489031 29489078 -65783573 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 809 675 269 0 0 chr17 29489080 29489236 -65783415 - B3A SINE B2 -42 156 1 1 809 46 83 0 0 chr17 29489341 29489450 -65783201 + AT_rich Low_complexity Low_complexity 1 109 0 1 809 1431 153 122 57 chr17 29489489 29489674 -65782977 + ORR1C2 LTR MaLR 1 172 -212 1 809 820 74 0 16 chr17 29489674 29489797 -65782854 + (TTCCC)n Simple_repeat Simple_repeat 1 121 0 1 809 1431 153 122 57 chr17 29489797 29489965 -65782686 + ORR1C2 LTR MaLR 173 376 -8 1 809 315 303 37 0 chr17 29490015 29490124 -65782527 + ID_B1 SINE B4 112 224 0 1 809 1496 79 16 0 chr17 29490132 29490322 -65782329 + B2_Mm2 SINE B2 1 193 -2 1 809 829 236 37 28 chr17 29490323 29490537 -65782114 + B3 SINE B2 1 216 0 1 809 1069 48 0 110 chr17 29490813 29490911 -65781740 - B1_Mus2 SINE Alu 0 147 65 1 809 1616 42 0 20 chr17 29490911 29491107 -65781544 + B2_Mm1a SINE B2 2 193 0 1 809 1069 48 0 110 chr17 29491107 29491172 -65781479 - B1_Mus2 SINE Alu -83 64 2 1 101 515 165 11 0 chr17 29491196 29491287 -65781364 + 4.5SRNA scRNA scRNA 1 92 -2 1 810 571 204 14 16 chr17 29491264 29491411 -65781240 + B1_Mur3 SINE Alu 5 149 0 1 810 447 125 0 0 chr17 29491427 29491499 -65781152 + (GGAAA)n Simple_repeat Simple_repeat 4 75 0 1 810 396 236 146 6 chr17 29491511 29491643 -65781008 + B1_Mur2 SINE Alu 2 145 -4 1 810 585 272 7 0 chr17 29491661 29491797 -65780854 + B1F SINE Alu 6 142 -7 1 810 764 267 63 0 chr17 29491805 29492011 -65780640 + ID_B1 SINE B4 5 223 -1 1 810 236 229 0 16 chr17 29492387 29492449 -65780202 - ID4 SINE ID -18 65 5 1 810 360 0 0 0 chr17 29492595 29492635 -65780016 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 810 726 177 13 52 chr17 29494377 29494532 -65778119 - ID_B1 SINE B4 -6 218 70 1 810 357 293 50 0 chr17 29494533 29494632 -65778019 - Lx8 LINE L1 -172 7301 7198 1 810 552 296 0 0 chr17 29494700 29494825 -65777826 - RSINE1 SINE B4 0 165 41 1 810 1185 48 14 0 chr17 29494975 29495121 -65777530 - B1_Mus1 SINE Alu 0 148 1 1 810 1533 53 0 11 chr17 29495175 29495366 -65777285 + B2_Mm1a SINE B2 1 189 -4 1 810 216 0 0 0 chr17 29495441 29495465 -65777186 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 810 326 53 18 18 chr17 29495465 29495522 -65777129 - B1_Mus2 SINE Alu -3 144 88 1 810 413 125 0 0 chr17 29495844 29495908 -65776743 + B3A SINE B2 1 64 -134 1 810 183 309 0 87 chr17 29496300 29496403 -65776248 + MIRm SINE MIR 41 134 -142 1 810 802 136 0 104 chr17 29496619 29496680 -65775971 - B1_Mus2 SINE Alu 0 147 99 1 810 1160 69 14 0 chr17 29496680 29496825 -65775826 + B1_Mm SINE Alu 1 147 0 1 810 802 136 0 104 chr17 29496825 29496927 -65775724 - B1_Mus2 SINE Alu -49 98 1 1 810 444 194 397 30 chr17 29497013 29497169 -65775482 + B3 SINE B2 3 216 0 1 810 382 255 30 30 chr17 29497184 29497285 -65775366 - RSINE1 SINE B4 -63 102 2 1 810 876 229 103 10 chr17 29497296 29497499 -65775152 - ID_B1 SINE B4 -1 223 2 1 810 601 234 147 66 chr17 29500318 29500515 -65772136 + ID_B1 SINE B4 8 220 -4 1 810 204 278 0 18 chr17 29500921 29500976 -65771675 + CT-rich Low_complexity Low_complexity 3 56 0 2 810 310 266 101 0 chr17 29500977 29501056 -65771595 - PB1D10 SINE Alu -9 108 22 3 810 27 29 0 0 chr17 29501110 29501144 -65771507 + AT_rich Low_complexity Low_complexity 1 34 0 4 810 320 121 0 39 chr17 29501156 29501223 -65771428 - B2_Mm2 SINE B2 -107 109 47 5 810 1434 52 23 0 chr17 29501291 29501465 -65771186 - B2_Mm2 SINE B2 -15 180 3 6 810 455 181 201 30 chr17 29502759 29502888 -65769763 + B3 SINE B2 19 164 -34 7 810 276 30 0 0 chr17 29502888 29502921 -65769730 + (CATA)n Simple_repeat Simple_repeat 4 36 0 8 810 455 163 222 24 chr17 29502921 29502960 -65769691 + B3 SINE B2 165 216 0 7 810 441 353 31 19 chr17 29502975 29503124 -65769527 + RSINE1 SINE B4 3 155 -10 9 810 432 118 0 0 chr17 29503124 29503192 -65769459 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 810 241 231 85 49 chr17 29503241 29503323 -65769328 + B1_Mur2 SINE Alu 65 149 0 1 810 1382 85 32 0 chr17 29503331 29503519 -65769132 + B2_Mm2 SINE B2 1 194 -1 1 810 424 202 0 50 chr17 29504492 29504591 -65768060 - MIRb SINE MIR -125 143 50 1 810 1793 177 35 17 chr17 29505480 29505921 -65766730 - RMER17C LTR ERVK -519 439 16 1 810 446 259 20 47 chr17 29506857 29507007 -65765644 + ID_B1 SINE B4 2 147 -77 1 810 563 270 0 8 chr17 29507412 29507539 -65765112 + B1_Mur1 SINE Alu 2 127 -22 1 810 364 237 0 0 chr17 29507506 29507582 -65765069 + B1F1 SINE Alu 66 141 -8 1 810 586 209 36 43 chr17 29507627 29507757 -65764894 + B1F SINE Alu 11 142 -7 1 810 489 61 37 0 chr17 29507757 29507839 -65764812 + (CA)n Simple_repeat Simple_repeat 2 86 0 1 810 801 280 10 0 chr17 29507875 29508075 -65764576 + ID_B1 SINE B4 2 203 -21 2 810 1168 100 0 12 chr17 29508693 29508865 -65763786 + B2_Mm2 SINE B2 1 170 -25 2 810 543 195 0 0 chr17 29508904 29509017 -65763634 + GA-rich Low_complexity Low_complexity 2 114 0 2 810 1444 71 43 0 chr17 29509401 29509585 -65763066 - B2_Mm2 SINE B2 -3 192 1 2 810 1140 75 0 27 chr17 29509596 29509746 -65762905 - B1_Mus1 SINE Alu -1 147 2 2 810 314 301 53 9 chr17 29509793 29509907 -65762744 + MIR SINE MIR 66 184 -78 2 810 342 0 0 0 chr17 29510408 29510446 -65762205 + (GA)n Simple_repeat Simple_repeat 1 38 0 2 810 414 57 0 0 chr17 29510547 29510600 -65762051 + (TC)n Simple_repeat Simple_repeat 1 53 0 2 810 1411 75 38 0 chr17 29510600 29510786 -65761865 - B2_Mm2 SINE B2 0 195 3 2 810 387 241 0 0 chr17 29511210 29511293 -65761358 + ID_B1 SINE B4 138 220 -4 2 810 574 196 34 40 chr17 29511329 29511478 -65761173 + B1_Mur1 SINE Alu 1 148 -1 3 810 238 304 70 63 chr17 29511556 29511714 -65760937 + MIR3 SINE MIR 8 166 -42 3 810 240 217 42 28 chr17 29512111 29512182 -65760469 - RMER21B LTR ERV1 -676 166 95 3 810 1214 48 0 0 chr17 29512272 29512410 -65760241 + B1_Mus2 SINE Alu 1 138 -9 3 810 224 30 30 0 chr17 29512410 29512443 -65760208 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 3 810 516 264 50 0 chr17 29512475 29512596 -65760055 + B1F SINE Alu 1 127 -22 3 810 283 176 135 81 chr17 29512594 29512668 -65759983 + ID_B1 SINE B4 146 223 -1 3 810 307 218 92 8 chr17 29512728 29512854 -65759797 + B3A SINE B2 3 186 -30 3 810 351 0 0 0 chr17 29513289 29513328 -65759323 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 3 810 280 184 0 0 chr17 29513386 29513435 -65759216 - ID SINE ID -172 52 4 3 810 194 279 64 46 chr17 29513468 29513577 -65759074 + MIRc SINE MIR 60 170 -98 4 810 1144 76 7 0 chr17 29514043 29514188 -65758463 - B1_Mus1 SINE Alu -1 147 2 4 810 607 234 22 0 chr17 29515030 29515167 -65757484 + ID_B1 SINE B4 85 224 0 4 810 219 344 32 20 chr17 29515467 29515618 -65757033 - MIR3 SINE MIR -105 163 6 4 810 220 321 0 0 chr17 29515618 29515674 -65756977 + polypyrimidine Low_complexity Low_complexity 1 56 0 4 810 689 276 60 20 chr17 29516250 29516450 -65756201 + ID_B1 SINE B4 12 219 -5 4 810 612 145 25 12 chr17 29516807 29516968 -65755683 + (TG)n Simple_repeat Simple_repeat 1 163 0 4 810 612 188 43 57 chr17 29516968 29517109 -65755542 - B1_Mur1 SINE Alu -8 141 3 4 810 271 338 85 35 chr17 29517109 29517143 -65755508 - B4 SINE B4 -195 97 57 4 810 313 197 39 13 chr17 29517149 29517226 -65755425 - MIRc SINE MIR -125 143 65 4 810 911 313 60 45 chr17 29517359 29517931 -65754720 + L1MA4 LINE L1 5576 6112 -1348 5 810 573 248 86 52 chr17 29517978 29518152 -65754499 + B3A SINE B2 1 180 -18 5 810 1061 83 168 25 chr17 29518827 29518988 -65753663 - B2_Mm2 SINE B2 -11 184 1 5 810 208 0 62 0 chr17 29518992 29519024 -65753627 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 5 810 1008 60 105 0 chr17 29519048 29519181 -65753470 - B1_Mus2 SINE Alu 0 147 1 5 810 334 160 168 11 chr17 29519205 29519300 -65753351 - B3 SINE B2 0 216 107 5 810 245 232 149 112 chr17 29519302 29519409 -65753242 - ID_B1 SINE B4 -18 206 96 5 810 1054 199 218 63 chr17 29519638 29519793 -65752858 + ORR1D2 LTR MaLR 1 165 -205 5 810 333 0 0 0 chr17 29519793 29519830 -65752821 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 810 1054 199 218 63 chr17 29519830 29519943 -65752708 + ORR1D2 LTR MaLR 166 323 -47 5 810 1425 71 11 0 chr17 29519943 29520126 -65752525 + B2_Mm1t SINE B2 2 186 -7 5 810 1054 199 218 63 chr17 29520126 29520173 -65752478 + ORR1D2 LTR MaLR 324 366 -4 5 810 3355 31 21 3 chr17 29520303 29520692 -65751959 + MTA_Mm LTR MaLR 1 396 0 6 810 436 319 126 0 chr17 29521194 29521385 -65751266 + ID_B1 SINE B4 2 216 -8 6 810 286 270 101 159 chr17 29521391 29521598 -65751053 + B3A SINE B2 1 195 0 6 810 432 167 27 18 chr17 29521604 29521714 -65750937 + GA-rich Low_complexity Low_complexity 4 114 0 6 810 205 167 0 27 chr17 29522005 29522042 -65750609 + C-rich Low_complexity Low_complexity 5 40 0 6 810 561 99 0 0 chr17 29522482 29522563 -65750088 + (TG)n Simple_repeat Simple_repeat 2 82 0 6 810 600 203 23 8 chr17 29522585 29522714 -65749937 - B3A SINE B2 -67 131 1 6 810 426 271 25 0 chr17 29522714 29522820 -65749831 - ID_B1 SINE B4 -35 189 81 6 810 2083 162 121 41 chr17 29523032 29523167 -65749484 + RLTR11A2 LTR ERVK 1 158 -369 6 810 895 211 11 11 chr17 29523167 29523354 -65749297 + B2_Mm2 SINE B2 1 187 -8 6 810 2083 162 121 41 chr17 29523354 29523706 -65748945 + RLTR11A2 LTR ERVK 159 527 0 6 810 690 238 7 13 chr17 29523767 29523916 -65748735 + B1_Mur1 SINE Alu 2 149 0 7 810 1356 63 17 28 chr17 29523922 29523939 -65748712 - B2_Mm2 SINE B2 -17 178 162 7 810 255 31 0 0 chr17 29523939 29523971 -65748680 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 7 810 1356 63 17 28 chr17 29523971 29524132 -65748519 - B2_Mm2 SINE B2 -34 161 2 7 810 493 265 68 57 chr17 29524166 29524342 -65748309 + B4 SINE B4 1 178 -114 7 810 202 333 0 0 chr17 29524414 29524471 -65748180 + (CA)n Simple_repeat Simple_repeat 1 57 0 7 810 219 69 0 0 chr17 29524471 29524500 -65748151 + (GA)n Simple_repeat Simple_repeat 1 29 0 7 810 1011 140 0 0 chr17 29524568 29524725 -65747926 + B2_Mm2 SINE B2 14 170 -25 7 810 369 194 180 31 chr17 29524770 29524898 -65747753 + B2_Mm2 SINE B2 47 193 -2 7 810 305 295 147 28 chr17 29524913 29525056 -65747595 - RSINE1 SINE B4 -3 162 3 7 810 433 314 0 36 chr17 29525087 29525226 -65747425 - B3A SINE B2 -38 160 27 7 810 412 211 165 9 chr17 29525242 29525357 -65747294 - B1_Mur1 SINE Alu -12 137 5 8 810 268 276 93 19 chr17 29525437 29525544 -65747107 + PB1D10 SINE Alu 2 116 -1 8 810 531 240 69 8 chr17 29525626 29525756 -65746895 + B1_Mur1 SINE Alu 12 149 0 8 810 309 254 56 0 chr17 29525773 29525844 -65746807 + ID4_ SINE ID 1 75 -8 8 810 396 267 95 3 chr17 29526611 29526748 -65745903 + MLT1H2 LTR MaLR 369 489 0 8 810 253 275 97 44 chr17 29526844 29526958 -65745693 + PB1D7 SINE Alu 1 120 0 8 810 498 17 0 0 chr17 29526958 29527017 -65745634 + (TG)n Simple_repeat Simple_repeat 1 59 0 8 810 540 283 28 21 chr17 29527017 29527158 -65745493 + RSINE1 SINE B4 16 157 -8 8 810 216 67 0 0 chr17 29527187 29527217 -65745434 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 8 810 271 293 5 14 chr17 29527228 29527343 -65745308 + PB1D7 SINE Alu 5 117 0 8 810 1211 48 0 14 chr17 29527376 29527523 -65745128 + B1_Mus2 SINE Alu 2 146 -1 9 810 385 339 0 0 chr17 29527530 29527642 -65745009 + B3A SINE B2 27 138 -60 9 810 186 43 0 0 chr17 29527672 29527695 -65744956 + (CAGA)n Simple_repeat Simple_repeat 4 26 0 9 810 404 156 0 135 chr17 29527709 29527813 -65744838 + MT2B LTR ERVL 168 257 -344 9 810 983 61 0 8 chr17 29527726 29527859 -65744792 + B1_Mur4 SINE Alu 19 150 0 9 810 21 36 0 0 chr17 29527859 29527887 -65744764 + AT_rich Low_complexity Low_complexity 1 28 0 9 810 360 241 45 0 chr17 29528081 29528186 -65744465 + B1F SINE Alu 6 120 0 9 810 371 225 67 11 chr17 29528215 29528305 -65744346 + ID_B1 SINE B4 99 193 -31 9 810 1275 28 0 0 chr17 29528680 29528825 -65743826 + B1_Mus2 SINE Alu 3 147 0 9 810 337 295 88 9 chr17 29528848 29528961 -65743690 + RSINE1 SINE B4 4 125 -40 9 810 364 20 0 0 chr17 29529062 29529112 -65743539 - B1_Mus2 SINE Alu 0 147 98 1 810 2533 96 3 14 chr17 29529241 29529591 -65743060 + ORR1A1 LTR MaLR 1 346 0 1 810 272 386 47 47 chr17 29530178 29530349 -65742302 + RMER4A LTR ERVK 3 173 -293 1 810 977 109 58 0 chr17 29531677 29531815 -65740836 + B1_Mus1 SINE Alu 3 148 0 1 810 411 252 84 52 chr17 29531841 29531996 -65740655 + ID_B1 SINE B4 8 167 -57 1 810 282 29 0 0 chr17 29532014 29532049 -65740602 + (TC)n Simple_repeat Simple_repeat 1 35 0 1 810 198 0 0 0 chr17 29532049 29532070 -65740581 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 810 369 0 0 0 chr17 29532070 29532110 -65740541 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 810 1176 51 0 0 chr17 29532820 29532958 -65739693 + B1_Mus2 SINE Alu 2 139 -8 1 810 243 0 0 0 chr17 29533139 29533166 -65739485 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 810 321 26 0 0 chr17 29533492 29533530 -65739121 + (CCA)n Simple_repeat Simple_repeat 1 38 0 1 810 323 238 82 90 chr17 29533534 29533668 -65738983 + ID_B1 SINE B4 91 223 -1 1 810 204 158 0 0 chr17 29534387 29534425 -65738226 + (TTA)n Simple_repeat Simple_repeat 1 38 0 1 810 441 263 136 21 chr17 29534588 29534728 -65737923 + B3A SINE B2 1 156 -42 1 810 246 62 0 0 chr17 29534739 29534771 -65737880 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 810 262 338 20 27 chr17 29534846 29534992 -65737659 - MER5A DNA MER1_type -42 147 3 1 810 220 295 51 0 chr17 29535557 29535635 -65737016 + ID4_ SINE ID 2 83 0 1 810 229 374 53 8 chr17 29535673 29535805 -65736846 - ID_B1 SINE B4 -63 161 24 1 810 211 260 12 49 chr17 29535832 29535845 -65736806 - B2_Mm2 SINE B2 -117 78 1 1 810 242 119 118 132 chr17 29535845 29535913 -65736738 - RSINE1 SINE B4 -97 68 2 1 810 440 281 23 8 chr17 29535935 29536064 -65736587 - B1F2 SINE Alu -8 141 11 1 810 246 330 33 0 chr17 29536374 29536465 -65736186 - L1M5 LINE L1 -474 5650 5557 1 810 456 19 0 0 chr17 29536563 29536616 -65736035 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 810 255 139 203 27 chr17 29536883 29536957 -65735694 + B1F2 SINE Alu 63 149 0 1 810 340 263 16 73 chr17 29536967 29537090 -65735561 + PB1D7 SINE Alu 4 119 -1 1 810 362 383 0 0 chr17 29537090 29537197 -65735454 + ID_B1 SINE B4 88 194 -30 1 810 216 394 23 30 chr17 29537197 29537221 -65735430 + B1_Mur3 SINE Alu 7 136 -13 1 810 358 308 171 0 chr17 29537238 29537384 -65735267 + B4 SINE B4 43 213 -79 1 810 195 42 0 0 chr17 29537387 29537411 -65735240 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 1 810 359 176 49 69 chr17 29537418 29537534 -65735117 + PB1D9 SINE Alu 8 120 0 1 810 272 341 16 16 chr17 29538037 29538165 -65734486 + MIRc SINE MIR 67 194 -74 1 810 206 316 0 116 chr17 29539351 29539437 -65733214 - L2b LINE L2 -1 3374 3299 1 810 1153 82 0 7 chr17 29539793 29539940 -65732711 - B1_Mus1 SINE Alu -1 147 2 1 810 256 265 18 5 chr17 29539969 29540189 -65732462 + (TG)n Simple_repeat Simple_repeat 1 223 0 1 810 538 323 13 6 chr17 29540193 29540360 -65732291 - B3A SINE B2 -13 203 36 1 810 236 204 0 60 chr17 29540406 29540464 -65732187 + B4 SINE B4 40 95 -70 1 810 866 97 80 29 chr17 29540464 29540602 -65732049 + B1_Mus2 SINE Alu 1 145 -2 1 810 378 0 0 0 chr17 29540698 29540740 -65731911 + (T)n Simple_repeat Simple_repeat 1 42 0 1 810 751 299 10 5 chr17 29542327 29542529 -65730122 - ID_B1 SINE B4 -15 209 7 1 810 432 273 86 86 chr17 29542663 29542803 -65729848 + B1_Mur1 SINE Alu 3 142 -7 1 810 1174 37 0 0 chr17 29542835 29542970 -65729681 + B1_Mus1 SINE Alu 1 135 -13 1 810 210 37 0 0 chr17 29542970 29542997 -65729654 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1 810 35 0 0 0 chr17 29543034 29543069 -65729582 + AT_rich Low_complexity Low_complexity 1 35 0 1 810 510 164 229 9 chr17 29543098 29543203 -65729448 - B1_Mm SINE Alu -19 128 1 1 810 297 75 0 0 chr17 29543453 29543493 -65729158 + (CCCCCA)n Simple_repeat Simple_repeat 1 40 0 1 810 222 118 0 0 chr17 29543522 29543556 -65729095 + (ATGGTG)n Simple_repeat Simple_repeat 5 38 0 1 810 620 65 65 0 chr17 29543633 29543740 -65728911 - L1_Mus3 LINE L1 -5 6633 6520 1 810 225 0 0 0 chr17 29543913 29543938 -65728713 + (TTGG)n Simple_repeat Simple_repeat 2 26 0 1 810 519 295 114 11 chr17 29543938 29544113 -65728538 - ID_B1 SINE B4 -10 214 22 1 810 995 147 28 0 chr17 29544939 29545088 -65727563 + B2_Mm1a SINE B2 11 160 -33 1 810 194 30 0 83 chr17 29545088 29545124 -65727527 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 1 810 995 147 28 0 chr17 29545124 29545151 -65727500 + B2_Mm1a SINE B2 161 191 -2 1 810 644 161 259 12 chr17 29545228 29545398 -65727253 + B3 SINE B2 2 213 -3 1 810 704 209 6 0 chr17 29545631 29545808 -65726843 + (CA)n Simple_repeat Simple_repeat 1 178 0 1 810 360 273 11 6 chr17 29545822 29545999 -65726652 + (CA)n Simple_repeat Simple_repeat 1 178 0 1 810 736 301 70 12 chr17 29546189 29546417 -65726234 - ID_B1 SINE B4 -35 257 6 1 810 234 62 0 0 chr17 29546461 29546493 -65726158 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 810 338 217 43 0 chr17 29546519 29546588 -65726063 - B3 SINE B2 -100 116 45 1 810 324 0 0 0 chr17 29546689 29546725 -65725926 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 810 1251 133 37 0 chr17 29547363 29547551 -65725100 + B2_Mm2 SINE B2 1 195 0 1 810 348 212 0 36 chr17 29548030 29548049 -65724602 - ID_B1 SINE B4 0 224 209 1 810 397 47 15 15 chr17 29548049 29548114 -65724537 + (GTTTG)n Simple_repeat Simple_repeat 2 66 0 1 810 348 212 0 36 chr17 29548114 29548177 -65724474 - ID_B1 SINE B4 -16 208 146 1 810 431 162 0 24 chr17 29548198 29548280 -65724371 - B1_Mur2 SINE Alu -5 144 65 1 810 333 182 0 0 chr17 29548252 29548307 -65724344 - ID_B1 SINE B4 -25 199 145 1 810 538 222 55 16 chr17 29548328 29548456 -65724195 - B1_Mur2 SINE Alu -5 144 12 1 810 238 306 0 40 chr17 29548389 29548464 -65724187 - MT2B2 LTR ERVL -344 240 169 1 810 210 295 164 0 chr17 29549272 29549333 -65723318 + ID2 SINE ID 13 83 0 1 810 547 242 0 43 chr17 29549469 29549607 -65723044 + ID_B1 SINE B4 91 222 -2 1 810 1074 76 7 7 chr17 29549616 29549761 -65722890 + B1_Mm SINE Alu 2 146 -1 1 810 319 278 339 18 chr17 29549786 29549955 -65722696 + B4 SINE B4 3 226 -66 1 810 561 246 71 0 chr17 29549955 29550081 -65722570 + RSINE1 SINE B4 2 136 -29 1 810 297 0 0 0 chr17 29550102 29550135 -65722516 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 810 1211 63 85 17 chr17 29550167 29550344 -65722307 + B2_Mm2 SINE B2 1 189 -6 1 810 510 182 164 0 chr17 29550365 29550475 -65722176 + B1_Mur1 SINE Alu 21 148 -1 1 810 344 260 80 132 chr17 29550370 29550521 -65722130 + B4 SINE B4 111 253 -39 1 810 252 0 0 0 chr17 29550528 29550556 -65722095 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 810 667 252 20 0 chr17 29550769 29550916 -65721735 - RSINE1 SINE B4 -12 153 4 1 810 323 211 0 0 chr17 29550985 29551042 -65721609 + B3A SINE B2 9 65 -133 1 810 373 97 28 0 chr17 29551043 29551115 -65721536 + (TG)n Simple_repeat Simple_repeat 2 75 0 1 810 237 231 0 133 chr17 29551150 29551225 -65721426 - ID_B1 SINE B4 -59 165 101 1 810 515 222 0 18 chr17 29551256 29551574 -65721077 + CT-rich Low_complexity Low_complexity 1 312 0 1 810 511 241 88 20 chr17 29551661 29551809 -65720842 + L1MD3 LINE L1 7808 7965 -30 1 810 398 298 67 22 chr17 29551825 29551959 -65720692 + B1F SINE Alu 10 149 0 1 810 772 169 29 0 chr17 29551969 29552105 -65720546 + B1_Mur1 SINE Alu 10 149 0 1 810 318 232 179 106 chr17 29552189 29552259 -65720392 - ID_B1 SINE B4 -2 222 1 1 810 653 206 66 7 chr17 29552259 29552396 -65720255 - B3 SINE B2 -71 145 1 1 810 351 315 5 91 chr17 29552396 29552428 -65720223 - YREP_Mm Unknown Unknown -1474 338 183 1 810 755 214 0 7 chr17 29552428 29552569 -65720082 + ID_B1 SINE B4 79 218 -6 1 810 603 27 0 0 chr17 29554051 29554124 -65718527 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 810 382 0 18 36 chr17 29554347 29554402 -65718249 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 1 810 1143 52 0 0 chr17 29554403 29554538 -65718113 - B1_Mus1 SINE Alu -11 137 3 1 810 431 273 31 62 chr17 29554715 29554875 -65717776 + RSINE1 SINE B4 11 165 0 1 810 30 0 0 0 chr17 29554875 29554905 -65717746 + AT_rich Low_complexity Low_complexity 1 30 0 1 810 1460 194 100 59 chr17 29554912 29554962 -65717689 + MTD LTR MaLR 14 60 -359 1 810 867 185 208 0 chr17 29554962 29555140 -65717511 - B3 SINE B2 0 216 2 1 810 1460 194 100 59 chr17 29555140 29555479 -65717172 + MTD LTR MaLR 61 419 0 1 810 621 207 9 0 chr17 29555503 29555619 -65717032 + ID_B1 SINE B4 107 223 -1 1 810 867 245 25 20 chr17 29555703 29555907 -65716744 - B3 SINE B2 -6 210 6 1 810 431 161 29 97 chr17 29556344 29556447 -65716204 + MT2B2 LTR ERVL 154 249 -335 1 810 768 128 103 0 chr17 29556358 29556475 -65716176 + B1_Mus2 SINE Alu 6 134 -13 1 810 280 231 15 0 chr17 29556478 29556543 -65716108 - PB1D10 SINE Alu -37 80 15 1 810 234 0 0 0 chr17 29556549 29556575 -65716076 + (GCTG)n Simple_repeat Simple_repeat 2 27 0 1 810 218 167 48 0 chr17 29556575 29556617 -65716034 + CT-rich Low_complexity Low_complexity 4 47 0 1 810 234 164 11 198 chr17 29556620 29556711 -65715940 - ID SINE ID -150 74 1 2 810 547 325 82 12 chr17 29557143 29557386 -65715265 + MER46C DNA MER2_type 79 338 0 2 810 595 248 7 68 chr17 29557428 29557575 -65715076 + ID_B1 SINE B4 83 220 -4 2 810 455 262 63 8 chr17 29557580 29557707 -65714944 + B1_Mur1 SINE Alu 2 135 -14 2 810 261 250 18 0 chr17 29557806 29557862 -65714789 + PB1D10 SINE Alu 35 91 -26 2 810 183 161 54 0 chr17 29557885 29557941 -65714710 + GA-rich Low_complexity Low_complexity 5 63 0 2 810 260 304 80 0 chr17 29558160 29558272 -65714379 + L1ME2 LINE L1 5881 6001 -163 2 810 1042 80 198 0 chr17 29558401 29558563 -65714088 + B2_Mm2 SINE B2 2 195 0 2 810 221 83 28 0 chr17 29558599 29558635 -65714016 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 2 810 948 137 0 40 chr17 29558644 29558796 -65713855 - B1_Mus1 SINE Alu -1 147 2 2 810 252 0 0 0 chr17 29558912 29558940 -65713711 + (T)n Simple_repeat Simple_repeat 1 28 0 2 810 1153 57 0 0 chr17 29558947 29559087 -65713564 - B1_Mus2 SINE Alu -3 144 5 2 810 258 261 0 0 chr17 29559113 29559178 -65713473 - B1_Mm SINE Alu 0 147 83 2 810 823 147 44 0 chr17 29559236 29559372 -65713279 + B1_Mm SINE Alu 6 147 0 2 810 391 255 209 64 chr17 29559395 29559567 -65713084 - B3A SINE B2 -1 197 1 2 810 519 274 85 52 chr17 29559710 29559922 -65712729 - ID_B1 SINE B4 0 224 6 2 810 737 33 11 0 chr17 29560602 29560693 -65711958 + B2_Mm2 SINE B2 1 92 -103 2 810 213 39 0 0 chr17 29560702 29560728 -65711923 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 2 810 282 339 5 145 chr17 29560728 29560834 -65711817 + ID_B1 SINE B4 93 178 -46 2 810 449 190 20 10 chr17 29560763 29560872 -65711779 + B1_Mus1 SINE Alu 28 150 0 2 810 539 200 26 17 chr17 29560921 29561038 -65711613 - PB1D9 SINE Alu -1 119 2 2 810 247 282 177 57 chr17 29561668 29561826 -65710825 + B2_Mm2 SINE B2 1 177 -18 2 810 1531 68 16 0 chr17 29561826 29562017 -65710634 + B2_Mm2 SINE B2 2 195 0 2 810 413 232 116 0 chr17 29562023 29562118 -65710533 - PB1D9 SINE Alu -13 107 2 2 810 359 202 25 0 chr17 29562575 29562654 -65709997 + PB1D10 SINE Alu 28 108 -9 2 810 1146 58 0 0 chr17 29562711 29562848 -65709803 + B1_Mus1 SINE Alu 2 138 -10 2 810 433 271 18 61 chr17 29562893 29563007 -65709644 + B1F SINE Alu 3 111 -6 2 810 599 268 0 75 chr17 29563072 29563233 -65709418 - RSINE1 SINE B4 -15 150 2 2 810 318 217 0 16 chr17 29563233 29563292 -65709359 + ID_B1 SINE B4 167 224 0 2 810 819 164 23 0 chr17 29563301 29563429 -65709222 - B1_Mus1 SINE Alu -17 131 1 2 810 288 221 0 128 chr17 29563429 29563501 -65709150 + MT2B LTR ERVL 178 240 -361 2 810 428 220 0 8 chr17 29563440 29563539 -65709112 + B1_Mur2 SINE Alu 25 120 0 2 810 1370 84 26 0 chr17 29563552 29563742 -65708909 + B2_Mm2 SINE B2 1 195 0 2 810 411 255 81 9 chr17 29563745 29563856 -65708795 - ID_B1 SINE B4 -104 120 2 2 810 509 93 21 75 chr17 29563985 29564078 -65708573 - B1_Mus2 SINE Alu 0 147 60 2 810 253 338 14 0 chr17 29564252 29564326 -65708325 - PB1D7 SINE Alu -14 106 32 2 810 283 222 12 100 chr17 29564373 29564453 -65708198 + MT2B LTR ERVL 168 240 -361 2 810 475 166 87 45 chr17 29564383 29564504 -65708147 + PB1D9 SINE Alu 14 149 0 2 810 972 120 0 0 chr17 29565631 29565781 -65706870 + (GAAA)n Simple_repeat Simple_repeat 2 151 0 2 810 360 272 0 88 chr17 29565948 29566073 -65706578 - Charlie16a DNA MER1_type -86 256 143 2 810 234 0 0 0 chr17 29566239 29566265 -65706386 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2 810 433 330 64 43 chr17 29566294 29566576 -65706075 + B4A SINE B4 5 292 0 2 810 711 197 51 0 chr17 29566706 29566843 -65705808 + B1_Mur1 SINE Alu 1 144 -5 2 810 458 226 95 9 chr17 29566862 29566978 -65705673 + RSINE1 SINE B4 5 130 -35 2 810 245 200 40 0 chr17 29567024 29567082 -65705569 + B3 SINE B2 1 60 -135 2 810 213 39 0 0 chr17 29567161 29567187 -65705464 + (A)n Simple_repeat Simple_repeat 1 26 0 2 810 486 214 29 0 chr17 29567335 29567438 -65705213 - PB1D9 SINE Alu -14 106 1 2 810 585 207 73 84 chr17 29567830 29568009 -65704642 + B3 SINE B2 39 215 -1 2 810 342 192 16 16 chr17 29568049 29568142 -65704509 + PB1D10 SINE Alu 34 126 -23 2 810 324 317 0 12 chr17 29568149 29568232 -65704419 + ID4_ SINE ID 2 83 0 2 810 241 295 20 129 chr17 29568577 29568789 -65703862 - MIR3 SINE MIR -57 205 13 2 810 227 329 119 23 chr17 29568979 29569156 -65703495 - MIRc SINE MIR -26 242 49 2 810 388 325 57 25 chr17 29569662 29569686 -65702965 + ID_B1 SINE B4 56 218 -6 2 810 471 273 82 15 chr17 29569686 29569820 -65702831 + B1F SINE Alu 1 143 -6 2 810 918 151 7 0 chr17 29569889 29570028 -65702623 - B1_Mus1 SINE Alu -1 147 8 2 810 560 217 9 0 chr17 29570027 29570133 -65702518 - B3A SINE B2 -91 107 1 2 810 540 234 32 116 chr17 29570134 29570323 -65702328 - ID_B1 SINE B4 0 224 52 2 810 327 299 133 5 chr17 29570286 29570474 -65702177 - MER46C DNA MER2_type -50 288 77 2 810 446 336 8 0 chr17 29570661 29570783 -65701868 - ID_B1 SINE B4 -16 208 86 2 810 251 336 73 16 chr17 29570941 29571065 -65701586 + B4 SINE B4 85 215 -77 2 810 554 242 31 57 chr17 29571280 29571473 -65701178 + B3A SINE B2 8 195 -3 2 810 204 40 0 0 chr17 29572001 29572026 -65700625 + (TA)n Simple_repeat Simple_repeat 1 25 0 2 810 270 0 0 0 chr17 29572031 29572061 -65700590 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 810 507 185 11 0 chr17 29572190 29572282 -65700369 + B1_Mur3 SINE Alu 3 95 -54 2 810 607 312 39 43 chr17 29572390 29572621 -65700030 - MLT1N2 LTR MaLR -325 237 8 2 810 538 289 65 7 chr17 29572678 29572831 -65699820 - ID_B1 SINE B4 -10 214 53 2 810 549 216 45 0 chr17 29572841 29572952 -65699699 + B3A SINE B2 15 130 -68 2 810 434 288 49 97 chr17 29572910 29573095 -65699556 + B4 SINE B4 36 211 -81 2 810 721 187 52 7 chr17 29572986 29573121 -65699530 + B1_Mur1 SINE Alu 9 149 0 2 810 189 0 0 0 chr17 29573168 29573189 -65699462 + (A)n Simple_repeat Simple_repeat 1 21 0 2 810 1044 75 0 0 chr17 29573196 29573330 -65699321 + B1_Mm SINE Alu 3 136 -11 2 810 240 32 0 0 chr17 29573393 29573409 -65699242 + (A)n Simple_repeat Simple_repeat 1 16 0 2 810 1132 41 0 120 chr17 29573409 29573576 -65699075 + B1_Mus2 SINE Alu 1 147 0 2 810 240 32 0 0 chr17 29573576 29573590 -65699061 + (A)n Simple_repeat Simple_repeat 1 14 0 2 810 579 206 107 2 chr17 29574760 29574890 -65697761 - B1_Mur1 SINE Alu 0 149 8 2 810 945 38 126 37 chr17 29574964 29575099 -65697552 - B1_Mus2 SINE Alu 0 147 1 2 810 1087 217 0 5 chr17 29575831 29576035 -65696616 + B3 SINE B2 14 216 0 2 810 524 299 82 6 chr17 29576337 29576495 -65696156 + ID_B1 SINE B4 3 172 -52 2 810 230 294 43 113 chr17 29576433 29576548 -65696103 + B1F2 SINE Alu 21 127 -22 2 810 294 253 0 48 chr17 29576604 29576687 -65695964 + ID_B1 SINE B4 146 224 0 2 810 875 115 46 0 chr17 29576689 29576819 -65695832 + B1_Mus1 SINE Alu 1 136 -12 2 810 340 203 0 14 chr17 29577363 29577433 -65695218 + ID4_ SINE ID 3 71 -12 2 810 237 159 0 0 chr17 29577881 29577925 -65694726 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 2 810 346 231 83 97 chr17 29578065 29578209 -65694442 - B1_Mur2 SINE Alu 0 149 8 2 810 238 279 12 81 chr17 29578135 29578221 -65694430 - MT2B LTR ERVL -362 239 160 2 810 854 178 15 0 chr17 29578232 29578367 -65694284 + B1_Mur4 SINE Alu 1 137 -13 2 810 306 0 0 0 chr17 29578367 29578401 -65694250 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 2 810 297 275 47 38 chr17 29578413 29578519 -65694132 + PB1D9 SINE Alu 1 107 -13 2 810 214 260 60 0 chr17 29578603 29578653 -65693998 - MIR3 SINE MIR -41 167 115 2 810 309 316 0 20 chr17 29579340 29579440 -65693211 - PB1D10 SINE Alu -19 98 1 2 810 1189 42 0 0 chr17 29579593 29579736 -65692915 + B1_Mm SINE Alu 1 143 -4 2 810 198 0 0 0 chr17 29579736 29579758 -65692893 + (CA)n Simple_repeat Simple_repeat 1 22 0 2 810 269 229 0 16 chr17 29579819 29579881 -65692770 + ID4_ SINE ID 5 65 -18 2 810 690 149 8 61 chr17 29579889 29580043 -65692608 + B1_Mur4 SINE Alu 1 148 -2 2 810 1315 74 46 0 chr17 29580331 29580506 -65692145 + B2_Mm1a SINE B2 1 183 -10 2 810 293 200 65 86 chr17 29580510 29580591 -65692060 + B4 SINE B4 1 80 -212 2 810 372 43 0 0 chr17 29580591 29580637 -65692014 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 810 293 298 26 60 chr17 29580637 29580688 -65691963 + B4 SINE B4 81 129 -36 2 810 250 298 102 49 chr17 29580789 29580974 -65691677 + MIRc SINE MIR 38 235 -33 2 810 560 250 16 0 chr17 29581168 29581292 -65691359 - B3 SINE B2 -5 211 86 2 810 408 91 0 0 chr17 29581293 29581359 -65691292 + (TG)n Simple_repeat Simple_repeat 2 67 0 2 810 872 41 195 0 chr17 29581370 29581493 -65691158 - B1_Mus1 SINE Alu 0 148 2 2 810 373 273 20 0 chr17 29581515 29581614 -65691037 - B3 SINE B2 -115 101 1 2 810 484 256 120 0 chr17 29581622 29581747 -65690904 - B1_Mur1 SINE Alu -5 144 5 2 810 228 67 0 0 chr17 29581760 29581790 -65690861 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 3 810 228 213 0 0 chr17 29581884 29581945 -65690706 + (CA)n Simple_repeat Simple_repeat 1 61 0 3 810 1169 71 0 0 chr17 29582602 29582743 -65689908 - B1_Mus2 SINE Alu -5 142 2 3 810 301 311 77 66 chr17 29582763 29582959 -65689692 - B3A SINE B2 0 198 1 3 810 303 204 184 48 chr17 29582964 29583067 -65689584 - ID_B1 SINE B4 -93 131 15 3 810 211 316 25 12 chr17 29583121 29583201 -65689450 - ID_B1 SINE B4 -66 158 78 3 810 204 40 0 0 chr17 29583241 29583266 -65689385 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 3 810 589 198 34 17 chr17 29583269 29583387 -65689264 - B1F SINE Alu -21 128 9 3 810 753 12 0 0 chr17 29583554 29583640 -65689011 + (TTTTC)n Simple_repeat Simple_repeat 1 86 0 3 810 454 112 4 18 chr17 29583645 29583761 -65688890 + B1_Mur4 SINE Alu 13 150 0 3 810 258 292 0 0 chr17 29583798 29583863 -65688788 + PB1D9 SINE Alu 3 67 -53 3 810 1292 65 42 36 chr17 29583863 29584055 -65688596 - B2_Mm2 SINE B2 -2 193 1 3 810 248 282 56 0 chr17 29584099 29584110 -65688541 + B1F SINE Alu 62 136 -13 3 810 328 250 0 0 chr17 29584110 29584170 -65688481 + ID_B1 SINE B4 152 211 -13 3 810 206 328 115 34 chr17 29584456 29584664 -65687987 + L2 LINE L2 1588 1812 -1607 3 810 766 158 0 40 chr17 29584666 29584902 -65687749 + GA-rich Low_complexity Low_complexity 1 226 0 3 810 258 32 0 0 chr17 29584903 29584934 -65687717 + (GAAA)n Simple_repeat Simple_repeat 1 31 0 3 810 271 297 36 82 chr17 29584945 29585055 -65687596 + PB1D7 SINE Alu 3 107 -13 3 810 222 37 0 0 chr17 29585529 29585556 -65687095 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 3 810 376 204 0 93 chr17 29585556 29585568 -65687083 - ID_B1 SINE B4 -2 222 125 3 810 723 83 0 0 chr17 29585568 29585664 -65686987 - B1_Mus2 SINE Alu -8 139 44 3 810 308 272 0 24 chr17 29586115 29586407 -65686244 + (TG)n Simple_repeat Simple_repeat 1 284 0 3 810 617 267 35 53 chr17 29586413 29586585 -65686066 - B3A SINE B2 -13 203 35 3 810 273 156 0 0 chr17 29586835 29586880 -65685771 - B3A SINE B2 -153 45 1 3 810 794 131 199 6 chr17 29586906 29587082 -65685569 - B3 SINE B2 -6 210 1 3 810 1159 57 0 0 chr17 29587380 29587520 -65685131 - B1_Mus1 SINE Alu -7 141 2 3 810 336 24 0 0 chr17 29587545 29587586 -65685065 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 810 350 233 130 65 chr17 29588865 29589003 -65683648 + B3A SINE B2 20 166 -32 3 810 298 232 9 144 chr17 29589012 29589123 -65683528 + MT2B2 LTR ERVL 152 247 -337 3 810 561 137 10 59 chr17 29589025 29589126 -65683525 + B1_Mur2 SINE Alu 2 97 -52 3 810 802 229 22 44 chr17 29589259 29589442 -65683209 + B3 SINE B2 2 180 -36 3 810 1177 184 4 66 chr17 29589510 29589674 -65682977 + RMER10B LTR ERVL 9 171 -227 3 810 1410 50 0 0 chr17 29589674 29589913 -65682738 + (TTTC)n Simple_repeat Simple_repeat 1 239 0 3 810 1103 58 43 0 chr17 29589913 29590051 -65682600 - B1_Mus2 SINE Alu -3 144 1 3 810 1177 184 4 66 chr17 29590051 29590157 -65682494 + RMER10B LTR ERVL 172 262 -136 3 810 661 248 9 78 chr17 29590174 29590393 -65682258 + RMER10B LTR ERVL 195 398 0 3 810 760 157 22 16 chr17 29590454 29590592 -65682059 - B1_Mur3 SINE Alu -2 147 2 3 810 331 329 15 50 chr17 29590712 29590834 -65681817 - B1_Mus2 SINE Alu 0 120 1 3 810 694 193 67 0 chr17 29590858 29590993 -65681658 + B1_Mur2 SINE Alu 1 144 -5 3 810 1245 41 0 0 chr17 29591027 29591173 -65681478 + B1_Mm SINE Alu 2 147 0 3 810 207 0 0 0 chr17 29591173 29591196 -65681455 + (A)n Simple_repeat Simple_repeat 1 23 0 3 810 655 262 40 17 chr17 29591207 29591382 -65681269 - B3A SINE B2 -19 179 1 3 810 443 272 10 10 chr17 29591428 29591532 -65681119 + ID_B1 SINE B4 112 215 -9 3 810 465 66 0 0 chr17 29591541 29591602 -65681049 + (TAAA)n Simple_repeat Simple_repeat 3 63 0 3 810 1166 82 0 0 chr17 29591675 29591821 -65680830 + B1_Mus2 SINE Alu 2 147 0 3 810 249 182 0 0 chr17 29591821 29591876 -65680775 + A-rich Low_complexity Low_complexity 1 55 0 3 810 1152 75 0 7 chr17 29591879 29592027 -65680624 + B1_Mus1 SINE Alu 2 148 0 3 810 687 206 0 22 chr17 29592036 29592175 -65680476 + B1_Mur2 SINE Alu 1 136 -13 3 810 247 305 0 0 chr17 29592176 29592235 -65680416 + polypurine Low_complexity Low_complexity 1 59 0 3 810 298 258 150 30 chr17 29592239 29592339 -65680312 + B4A SINE B4 54 165 -127 3 810 230 250 17 0 chr17 29592351 29592411 -65680240 + B4 SINE B4 232 292 0 3 810 473 206 27 27 chr17 29593012 29593122 -65679529 - B1_Mur1 SINE Alu -17 132 23 3 810 241 294 133 29 chr17 29593040 29593145 -65679506 - B4 SINE B4 -96 196 81 3 810 866 188 191 11 chr17 29593157 29593340 -65679311 - B3 SINE B2 0 216 1 3 810 25 65 0 0 chr17 29593351 29593397 -65679254 + AT_rich Low_complexity Low_complexity 1 46 0 3 810 850 195 72 39 chr17 29593413 29593621 -65679030 - B3 SINE B2 0 216 2 3 810 657 301 180 77 chr17 29593628 29593693 -65678958 + RCHARR1 DNA MER1_type 4 53 -921 3 810 423 56 0 0 chr17 29593693 29593747 -65678904 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 810 657 301 180 77 chr17 29593747 29594109 -65678542 + RCHARR1 DNA MER1_type 54 475 -499 3 810 544 252 41 0 chr17 29594102 29594225 -65678426 - B1_Mur4 SINE Alu -1 149 22 3 810 800 232 77 48 chr17 29594238 29594446 -65678205 + B3 SINE B2 3 216 0 3 810 498 242 82 22 chr17 29594563 29594698 -65677953 - B1F1 SINE Alu 0 149 7 3 810 404 287 92 43 chr17 29594565 29594729 -65677922 - ID_B1 SINE B4 0 224 53 3 810 260 268 0 0 chr17 29595668 29595724 -65676927 + ID_B1 SINE B4 92 147 -77 3 810 461 316 27 54 chr17 29595721 29595868 -65676783 + RSINE1 SINE B4 11 153 -12 3 810 1141 83 0 0 chr17 29596102 29596246 -65676405 - B1_Mus2 SINE Alu -3 144 1 3 810 234 268 0 16 chr17 29597115 29597196 -65675455 + MIRb SINE MIR 178 258 -10 3 810 187 336 39 124 chr17 29597124 29597253 -65675398 - MIRm SINE MIR -6 270 153 3 810 335 300 107 8 chr17 29597519 29597640 -65675011 + ID_B1 SINE B4 83 215 -9 3 810 461 268 119 35 chr17 29597649 29597792 -65674859 + RSINE1 SINE B4 3 157 -8 3 810 1169 50 28 0 chr17 29597799 29597940 -65674711 - B1_Mus2 SINE Alu -2 145 1 3 810 691 131 350 0 chr17 29597989 29598149 -65674502 + B3 SINE B2 1 216 0 3 810 999 193 64 30 chr17 29598159 29598362 -65674289 - B3 SINE B2 -6 210 1 3 810 428 220 47 57 chr17 29598382 29598488 -65674163 + B1_Mur4 SINE Alu 3 107 -43 3 810 397 299 25 121 chr17 29598579 29598819 -65673832 + ID_B1 SINE B4 2 218 -6 3 810 447 249 92 48 chr17 29598893 29599081 -65673570 + B3A SINE B2 10 202 -14 3 810 1225 55 7 0 chr17 29599081 29599227 -65673424 + B1_Mus2 SINE Alu 1 147 0 3 810 291 262 118 98 chr17 29599227 29599241 -65673410 + B3 SINE B2 203 216 0 3 810 504 290 26 95 chr17 29599404 29599636 -65673015 + Tigger14a DNA MER2_type 24 239 -85 3 810 585 254 79 49 chr17 29599752 29599955 -65672696 + ID_B1 SINE B4 11 219 -5 3 810 1258 41 0 0 chr17 29599971 29600117 -65672534 - B1_Mm SINE Alu 0 147 2 3 810 223 264 0 122 chr17 29600279 29600361 -65672290 - PB1D10 SINE Alu 0 117 46 3 810 361 227 15 153 chr17 29601732 29601863 -65670788 + B3 SINE B2 2 117 -76 3 810 315 0 0 0 chr17 29601928 29601963 -65670688 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 810 427 189 25 67 chr17 29601986 29602105 -65670546 + RSINE1 SINE B4 3 116 -49 3 810 824 43 256 0 chr17 29603230 29603347 -65669304 - B1_Mus1 SINE Alu 0 148 2 3 810 1559 48 16 0 chr17 29603349 29603538 -65669113 - B2_Mm2 SINE B2 -2 193 2 3 810 615 273 0 15 chr17 29603538 29603672 -65668979 + RSINE1 SINE B4 26 157 -8 3 810 180 111 0 0 chr17 29603830 29603857 -65668794 + (CCCCG)n Simple_repeat Simple_repeat 3 29 0 3 810 578 239 100 0 chr17 29604103 29604233 -65668418 - B1F2 SINE Alu -5 144 2 3 810 453 259 20 67 chr17 29605264 29605413 -65667238 - B1_Mus1 SINE Alu -1 147 6 3 810 335 251 147 92 chr17 29605307 29605491 -65667160 - B4 SINE B4 -97 195 2 3 810 544 209 43 81 chr17 29605584 29605745 -65666906 + RSINE1 SINE B4 11 165 0 3 810 690 83 234 32 chr17 29605935 29606059 -65666592 + B1_Mur4 SINE Alu 2 150 0 3 810 675 152 8 16 chr17 29606184 29606311 -65666340 + B1_Mur3 SINE Alu 24 149 0 3 810 402 21 0 0 chr17 29606741 29606788 -65665863 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 810 553 206 0 7 chr17 29606807 29606913 -65665738 - PB1D7 SINE Alu -35 114 14 3 810 242 308 31 0 chr17 29606861 29606926 -65665725 - B4A SINE B4 -143 149 83 3 810 597 177 0 0 chr17 29607140 29607253 -65665398 + GA-rich Low_complexity Low_complexity 4 116 0 3 810 602 0 27 0 chr17 29608002 29608075 -65664576 + (TTTA)n Simple_repeat Simple_repeat 2 76 0 3 810 1076 67 0 29 chr17 29608075 29608214 -65664437 - B1_Mus1 SINE Alu -12 136 2 3 810 570 257 35 35 chr17 29608289 29608434 -65664217 - B1F2 SINE Alu -3 146 2 3 810 233 162 0 0 chr17 29608688 29608725 -65663926 - B1_Mus1 SINE Alu -97 51 15 3 810 1231 180 31 45 chr17 29608875 29609166 -65663485 + MTC-int LTR MaLR 1 287 -971 3 810 838 171 7 21 chr17 29609166 29609309 -65663342 + B1_Mur4 SINE Alu 1 141 -9 4 810 560 165 73 24 chr17 29609340 29609464 -65663187 + MTC-int LTR MaLR 1129 1258 0 3 810 1176 76 0 0 chr17 29609470 29609615 -65663036 + B1_Mus2 SINE Alu 2 146 -1 4 810 569 167 111 0 chr17 29609630 29609738 -65662913 + MTC LTR MaLR 1 120 -301 3 810 761 120 2 0 chr17 29609742 29609859 -65662792 - B1_Mm SINE Alu 0 120 2 4 810 1802 161 37 0 chr17 29609859 29610156 -65662495 + MTC LTR MaLR 108 415 -6 3 810 650 230 151 43 chr17 29610170 29610356 -65662295 - ID_B1 SINE B4 -18 206 1 4 810 500 62 0 0 chr17 29610563 29610628 -65662023 + B1_Mus2 SINE Alu 1 65 -82 4 810 225 0 0 0 chr17 29610702 29610727 -65661924 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 810 491 233 36 29 chr17 29610736 29610873 -65661778 - B1_Mur2 SINE Alu -8 141 4 4 810 534 179 136 68 chr17 29611571 29611703 -65660948 + B1_Mur2 SINE Alu 8 148 -1 4 810 1261 47 0 0 chr17 29611705 29611853 -65660798 + B1_Mus1 SINE Alu 1 148 0 4 810 188 152 63 0 chr17 29611867 29611946 -65660705 + (CAAA)n Simple_repeat Simple_repeat 2 85 0 4 810 377 179 146 10 chr17 29612101 29612197 -65660454 - MIRc SINE MIR -98 170 62 4 810 569 205 51 0 chr17 29612460 29612577 -65660074 + B1_Mus1 SINE Alu 4 126 -22 4 810 468 139 63 0 chr17 29612596 29612675 -65659976 + B1_Mur3 SINE Alu 65 148 -1 4 810 1420 90 0 11 chr17 29612688 29612878 -65659773 + B2_Mm2 SINE B2 2 189 -6 4 810 567 202 16 32 chr17 29612918 29613041 -65659610 - B1_Mur1 SINE Alu -5 144 24 4 810 378 0 0 0 chr17 29613042 29613084 -65659567 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 810 573 158 240 8 chr17 29613087 29613208 -65659443 - B3 SINE B2 -66 150 2 4 810 1194 68 0 0 chr17 29613222 29613368 -65659283 - B1_Mus2 SINE Alu 0 147 2 4 810 326 231 83 40 chr17 29613659 29613763 -65658888 - B1_Mur3 SINE Alu -8 112 3 4 810 349 197 52 13 chr17 29613771 29613848 -65658803 + PB1D7 SINE Alu 40 119 -1 4 810 499 160 167 27 chr17 29613926 29614037 -65658614 + B1_Mur2 SINE Alu 5 130 -19 4 810 247 294 33 12 chr17 29614104 29614196 -65658455 + B1F SINE Alu 17 104 -13 4 810 1214 68 0 0 chr17 29614196 29614343 -65658308 + B1_Mus1 SINE Alu 2 148 0 4 810 221 337 0 38 chr17 29614343 29614355 -65658296 + PB1D10 SINE Alu 105 116 -1 4 810 310 198 129 21 chr17 29614410 29614503 -65658148 - MER5A DNA MER1_type -80 109 7 4 810 210 176 0 0 chr17 29614854 29614905 -65657746 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 810 231 250 0 0 chr17 29614931 29614979 -65657672 - RSINE1 SINE B4 -10 155 108 4 810 748 199 0 0 chr17 29615432 29615563 -65657088 - B1_Mur1 SINE Alu -6 143 13 4 810 436 271 34 0 chr17 29615677 29615795 -65656856 - Lx8 LINE L1 -509 6964 6843 4 810 614 122 16 16 chr17 29615816 29615864 -65656787 + polypyrimidine Low_complexity Low_complexity 77 125 0 4 810 1242 47 0 0 chr17 29615864 29616012 -65656639 - B1_Mus1 SINE Alu 0 148 1 4 810 614 122 16 16 chr17 29616012 29616088 -65656563 + polypyrimidine Low_complexity Low_complexity 2 76 0 4 810 820 176 17 17 chr17 29616082 29616378 -65656273 + CT-rich Low_complexity Low_complexity 1 296 0 4 810 680 204 14 21 chr17 29616381 29616521 -65656130 - B1_Mur2 SINE Alu -8 141 3 4 810 473 265 20 75 chr17 29616927 29617074 -65655577 + B1F1 SINE Alu 1 139 -10 4 810 315 252 11 240 chr17 29617107 29617208 -65655443 - ID_B1 SINE B4 0 224 167 4 810 1131 88 0 13 chr17 29617208 29617357 -65655294 - B1_Mus1 SINE Alu -1 147 1 4 810 315 252 11 240 chr17 29617357 29617438 -65655213 - ID_B1 SINE B4 -58 166 84 4 810 234 291 0 25 chr17 29617536 29617617 -65655034 - ID4 SINE ID 0 83 5 4 810 554 82 21 0 chr17 29617642 29617739 -65654912 + (TCTCTG)n Simple_repeat Simple_repeat 2 100 0 4 810 437 200 59 0 chr17 29617743 29617828 -65654823 - B1_Mm SINE Alu -56 91 2 4 810 257 303 40 0 chr17 29617948 29618024 -65654627 - PB1D9 SINE Alu 0 120 42 4 810 529 328 8 8 chr17 29618289 29618421 -65654230 + RSINE1 SINE B4 3 134 -31 4 810 210 163 68 23 chr17 29618476 29618520 -65654131 - PB1 SINE Alu -71 56 11 4 810 198 0 0 0 chr17 29618615 29618637 -65654014 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 810 340 272 50 50 chr17 29618642 29618762 -65653889 - B4 SINE B4 -170 122 3 4 810 349 261 125 0 chr17 29618770 29618858 -65653793 - PB1D10 SINE Alu 0 117 19 4 810 897 151 20 0 chr17 29618909 29619055 -65653596 + B1_Mur4 SINE Alu 2 150 0 4 810 293 0 27 0 chr17 29619055 29619092 -65653559 + (CAA)n Simple_repeat Simple_repeat 2 39 0 4 810 870 170 6 48 chr17 29619645 29619799 -65652852 + B3 SINE B2 1 149 -67 4 810 362 74 0 18 chr17 29619799 29619854 -65652797 + (CATA)n Simple_repeat Simple_repeat 3 56 0 4 810 870 170 6 48 chr17 29619854 29619866 -65652785 + B3 SINE B2 150 160 -56 4 810 253 307 48 38 chr17 29619900 29620005 -65652646 + B1F SINE Alu 42 147 -2 4 810 254 370 0 0 chr17 29620070 29620143 -65652508 + PB1D10 SINE Alu 34 106 -11 4 810 2103 122 44 12 chr17 29620148 29620489 -65652162 - ORR1B1 LTR MaLR -8 386 35 4 810 299 281 149 0 chr17 29620511 29620625 -65652026 + ID_B1 SINE B4 81 211 -13 4 810 248 271 40 54 chr17 29620645 29620719 -65651932 + ID4 SINE ID 7 79 -4 4 810 346 306 47 13 chr17 29620730 29620879 -65651772 + RSINE1 SINE B4 3 156 -9 4 810 421 283 8 66 chr17 29620947 29621068 -65651583 - B3 SINE B2 -52 164 51 4 810 288 0 0 0 chr17 29621082 29621114 -65651537 + (TCTA)n Simple_repeat Simple_repeat 2 33 0 4 810 792 143 59 15 chr17 29621114 29621249 -65651402 - B1_Mur4 SINE Alu -6 144 4 4 810 1145 102 96 0 chr17 29621290 29621467 -65651184 + B2_Mm2 SINE B2 1 194 -1 4 810 428 214 44 11 chr17 29621494 29621584 -65651067 + B3A SINE B2 49 141 -57 4 810 504 48 0 0 chr17 29621609 29621672 -65650979 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 810 694 167 9 0 chr17 29621740 29621848 -65650803 - B1_Mur2 SINE Alu -37 112 4 4 810 774 84 227 0 chr17 29621929 29622048 -65650603 + B1_Mm SINE Alu 1 146 -1 4 810 261 0 0 0 chr17 29622060 29622089 -65650562 + (A)n Simple_repeat Simple_repeat 1 29 0 4 810 478 230 12 12 chr17 29622089 29622206 -65650445 + PB1D9 SINE Alu 1 117 0 4 811 364 239 34 68 chr17 29622326 29622443 -65650208 - B1_Mur3 SINE Alu -1 148 36 4 811 235 271 89 89 chr17 29622333 29622491 -65650160 - ID_B1 SINE B4 -8 216 59 4 811 252 213 0 60 chr17 29622604 29622654 -65649997 - B1_Mur4 SINE Alu -77 73 27 4 811 631 328 21 10 chr17 29622658 29622852 -65649799 - B3 SINE B2 -20 196 1 4 811 494 179 209 26 chr17 29622878 29622993 -65649658 - ID_B1 SINE B4 0 224 89 4 811 448 191 105 11 chr17 29622969 29623064 -65649587 - B3 SINE B2 -112 104 1 4 811 584 262 14 7 chr17 29623093 29623239 -65649412 - B1_Mur1 SINE Alu -1 148 2 4 811 1033 109 0 7 chr17 29623442 29623589 -65649062 + B1_Mus1 SINE Alu 3 148 0 4 811 502 251 58 105 chr17 29623823 29624014 -65648637 - B3A SINE B2 -16 182 1 4 811 263 28 28 0 chr17 29624033 29624069 -65648582 + (GA)n Simple_repeat Simple_repeat 1 37 0 4 811 225 291 0 0 chr17 29624208 29624263 -65648388 + RSINE1 SINE B4 109 163 -2 4 811 222 272 158 12 chr17 29624426 29624508 -65648143 - MIR SINE MIR -97 165 72 4 811 220 346 0 0 chr17 29624667 29624719 -65647932 - ID4_ SINE ID -29 54 3 4 811 317 342 8 71 chr17 29624726 29624852 -65647799 - PB1D7 SINE Alu -2 118 1 4 811 1489 37 26 26 chr17 29625032 29625190 -65647461 + B2_Mm1a SINE B2 1 158 -35 4 811 189 0 0 0 chr17 29625190 29625211 -65647440 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 4 811 1489 37 26 26 chr17 29625211 29625245 -65647406 + B2_Mm1a SINE B2 159 193 0 4 811 267 276 126 0 chr17 29625316 29625403 -65647248 - PB1D9 SINE Alu 0 120 23 4 811 509 194 158 36 chr17 29625354 29625493 -65647158 - ID_B1 SINE B4 -67 157 2 4 811 250 250 16 57 chr17 29627559 29627682 -65644969 + C-rich Low_complexity Low_complexity 5 122 0 4 811 240 222 24 12 chr17 29627709 29627791 -65644860 + (CGG)n Simple_repeat Simple_repeat 2 84 0 4 811 206 105 0 26 chr17 29627796 29627835 -65644816 + (CAG)n Simple_repeat Simple_repeat 3 40 0 4 811 216 286 0 0 chr17 29627957 29628027 -65644624 + (CCCCAG)n Simple_repeat Simple_repeat 6 75 0 4 811 234 105 0 0 chr17 29629181 29629219 -65643432 + (TTG)n Simple_repeat Simple_repeat 2 39 0 4 811 276 100 0 0 chr17 29629378 29629418 -65643233 + (T)n Simple_repeat Simple_repeat 1 40 0 4 811 249 33 0 0 chr17 29629467 29629497 -65643154 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 4 811 198 0 0 0 chr17 29629923 29629945 -65642706 + (T)n Simple_repeat Simple_repeat 1 22 0 4 811 381 176 59 0 chr17 29630341 29630409 -65642242 - B1_Mus2 SINE Alu -72 75 4 4 811 656 194 78 0 chr17 29630455 29630584 -65642067 + B1_Mus1 SINE Alu 10 148 0 4 811 23 0 0 0 chr17 29631147 29631170 -65641481 + AT_rich Low_complexity Low_complexity 1 23 0 4 811 192 77 0 0 chr17 29632008 29632034 -65640617 + (G)n Simple_repeat Simple_repeat 1 26 0 4 811 180 97 0 0 chr17 29632390 29632421 -65640230 + (A)n Simple_repeat Simple_repeat 1 31 0 4 811 291 130 0 0 chr17 29632551 29632605 -65640046 + (T)n Simple_repeat Simple_repeat 1 54 0 4 811 189 0 0 0 chr17 29632640 29632661 -65639990 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 4 811 1244 58 116 6 chr17 29633451 29633623 -65639028 - B2_Mm2 SINE B2 -4 191 1 4 811 311 207 138 0 chr17 29633644 29633731 -65638920 - B1_Mur3 SINE Alu -16 133 35 4 811 573 145 90 41 chr17 29633743 29633865 -65638786 - B1_Mur3 SINE Alu -4 145 18 5 811 358 320 62 0 chr17 29633896 29633993 -65638658 + ID_B1 SINE B4 62 164 -60 5 811 215 294 86 29 chr17 29634032 29634102 -65638549 + B1_Mur1 SINE Alu 34 107 -42 5 811 974 189 89 0 chr17 29634139 29634319 -65638332 + B3 SINE B2 1 196 -20 5 811 1264 48 0 0 chr17 29634333 29634480 -65638171 + B1_Mus1 SINE Alu 1 147 -1 5 811 546 57 0 0 chr17 29634481 29634551 -65638100 + (GAAA)n Simple_repeat Simple_repeat 3 72 0 5 811 326 246 58 0 chr17 29634552 29634621 -65638030 + B3A SINE B2 32 104 -94 5 811 1008 68 0 0 chr17 29634703 29634836 -65637815 + (TTTC)n Simple_repeat Simple_repeat 3 135 0 5 811 229 255 288 9 chr17 29634836 29634947 -65637704 - ID_B1 SINE B4 -13 211 70 5 811 927 73 0 8 chr17 29635346 29635471 -65637180 - B2_Mm2 SINE B2 -15 180 57 5 811 1555 67 0 5 chr17 29635598 29635793 -65636858 + B2_Mm2 SINE B2 1 194 -1 5 811 563 204 92 9 chr17 29635868 29635977 -65636674 - B1_Mur2 SINE Alu -1 119 2 5 811 200 59 0 29 chr17 29635987 29636022 -65636629 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 5 811 207 0 0 0 chr17 29636130 29636153 -65636498 + (TC)n Simple_repeat Simple_repeat 2 24 0 5 811 1203 68 0 0 chr17 29636156 29636303 -65636348 - B1_Mus1 SINE Alu 0 148 2 5 811 524 256 7 65 chr17 29636609 29636747 -65635904 - RSINE1 SINE B4 -22 143 14 5 811 747 187 58 0 chr17 29636843 29636982 -65635669 - B3 SINE B2 -67 149 3 5 811 388 198 91 30 chr17 29637128 29637227 -65635424 - ID_B1 SINE B4 -36 188 84 5 811 472 261 0 122 chr17 29637282 29637430 -65635221 + RSINE1 SINE B4 11 140 -25 5 811 391 255 57 38 chr17 29637424 29637530 -65635121 + ID_B1 SINE B4 95 202 -22 5 811 329 175 0 0 chr17 29638213 29638270 -65634381 + ID SINE ID 4 60 -164 5 811 183 42 0 0 chr17 29638278 29638302 -65634349 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 811 1315 53 0 12 chr17 29638302 29638472 -65634179 - B2_Mm2 SINE B2 -27 168 1 5 811 418 200 77 11 chr17 29638481 29638572 -65634079 + ID_B1 SINE B4 102 198 -26 5 811 1209 55 0 7 chr17 29638701 29638847 -65633804 + B1_Mus1 SINE Alu 2 146 -2 5 811 666 291 5 57 chr17 29638933 29639126 -65633525 - B3A SINE B2 -15 183 1 5 811 231 146 0 0 chr17 29639145 29639186 -65633465 + (CAT)n Simple_repeat Simple_repeat 3 43 0 5 811 574 100 0 0 chr17 29639207 29639287 -65633364 - B1_Mur4 SINE Alu 0 150 71 5 811 344 198 21 52 chr17 29639270 29639366 -65633285 - ID_B1 SINE B4 -130 94 2 5 811 324 342 53 53 chr17 29639745 29639952 -65632699 + L1ME1 LINE L1 5973 6179 0 5 811 187 200 67 0 chr17 29640208 29640253 -65632398 - L3 LINE CR1 -3475 1014 967 5 811 384 231 156 8 chr17 29640313 29640435 -65632216 + B1F2 SINE Alu 9 148 -1 5 811 264 312 219 14 chr17 29640599 29640745 -65631906 - MLT1J LTR MaLR -331 181 6 5 811 898 126 44 39 chr17 29640755 29640937 -65631714 - B2_Mm2 SINE B2 -9 186 4 5 811 225 288 35 103 chr17 29640986 29641102 -65631549 + MT2B2 LTR ERVL 156 263 -321 5 811 627 266 0 0 chr17 29641006 29641134 -65631517 + ID_B1 SINE B4 92 219 -5 5 811 337 167 0 0 chr17 29641137 29641197 -65631454 + B3 SINE B2 20 79 -137 5 811 621 179 34 0 chr17 29641347 29641464 -65631187 + B2_Mm2 SINE B2 5 125 -70 5 811 240 184 171 0 chr17 29641639 29641715 -65630936 - RSINE1 SINE B4 -28 137 49 5 811 681 117 0 0 chr17 29641715 29641843 -65630808 + (TC)n Simple_repeat Simple_repeat 1 128 0 5 811 549 224 103 0 chr17 29641843 29641959 -65630692 - B1_Mur1 SINE Alu -5 144 17 5 811 1420 47 41 0 chr17 29641966 29642138 -65630513 + B2_Mm2 SINE B2 3 181 -14 5 811 585 94 0 0 chr17 29642212 29642297 -65630354 + (GAAA)n Simple_repeat Simple_repeat 2 86 0 5 811 2189 161 62 10 chr17 29642312 29642701 -65629950 + MTC LTR MaLR 5 413 -8 5 811 2089 154 67 80 chr17 29642704 29642990 -65629661 + MTC-int LTR MaLR 2 307 -951 5 811 1171 62 0 0 chr17 29642990 29643128 -65629523 + B1_Mus2 SINE Alu 1 138 -9 5 811 180 0 0 0 chr17 29643128 29643148 -65629503 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 5 811 2089 154 67 80 chr17 29643154 29643331 -65629320 + MTC-int LTR MaLR 308 459 -799 5 811 989 50 121 0 chr17 29643330 29643470 -65629181 - B2_Mm2 SINE B2 -38 157 1 5 811 336 102 0 0 chr17 29643543 29643592 -65629059 + (T)n Simple_repeat Simple_repeat 1 49 0 5 811 1225 61 0 0 chr17 29643592 29643739 -65628912 - B1_Mus2 SINE Alu 0 147 1 5 811 339 213 40 69 chr17 29644030 29644131 -65628520 + ID_B1 SINE B4 125 222 -2 5 811 440 260 138 0 chr17 29644198 29644321 -65628330 + B1_Mur1 SINE Alu 5 144 -5 5 811 636 151 68 98 chr17 29644334 29644466 -65628185 + B1_Mus1 SINE Alu 9 136 -12 5 811 735 71 0 0 chr17 29644470 29644568 -65628083 + (GGAA)n Simple_repeat Simple_repeat 3 100 0 5 811 233 75 0 24 chr17 29644577 29644618 -65628033 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 5 811 381 250 0 12 chr17 29644707 29644792 -65627859 - L2a LINE L2 -3 3423 3340 5 811 242 179 18 0 chr17 29644980 29645036 -65627615 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 811 950 141 0 7 chr17 29645096 29645239 -65627412 + B1_Mus1 SINE Alu 1 142 -6 5 811 395 248 10 10 chr17 29645284 29645386 -65627265 - RSINE1 SINE B4 -5 160 59 5 811 763 132 16 0 chr17 29645479 29645600 -65627051 - B1_Mur3 SINE Alu -25 124 2 5 811 907 70 0 0 chr17 29645671 29645786 -65626865 - B2_Mm2 SINE B2 -80 115 1 5 811 188 149 0 21 chr17 29645791 29645839 -65626812 + T-rich Low_complexity Low_complexity 5 51 0 5 811 876 137 58 0 chr17 29645839 29645978 -65626673 - B1_Mus1 SINE Alu 0 148 2 5 811 436 295 91 40 chr17 29646054 29646329 -65626322 - B4A SINE B4 -1 291 3 5 811 204 40 0 0 chr17 29646499 29646524 -65626127 + (TTCC)n Simple_repeat Simple_repeat 1 25 0 5 811 269 189 0 0 chr17 29646524 29646577 -65626074 - B2_Mm1t SINE B2 -3 190 138 5 811 305 180 109 9 chr17 29646566 29646648 -65626003 - B2_Mm2 SINE B2 -107 109 17 5 811 22 0 0 0 chr17 29646663 29646685 -65625966 + AT_rich Low_complexity Low_complexity 1 22 0 5 811 759 79 0 10 chr17 29646686 29646788 -65625863 - B2_Mm2 SINE B2 -94 101 1 5 811 543 151 166 19 chr17 29647122 29647251 -65625400 - B1_Mur1 SINE Alu -1 148 5 5 811 380 244 100 39 chr17 29647128 29647308 -65625343 - ID_B1 SINE B4 -1 223 37 5 811 936 148 0 7 chr17 29647308 29647458 -65625193 - B1_Mur4 SINE Alu 0 150 2 5 811 1550 178 147 28 chr17 29648047 29648068 -65624583 - RMER10A LTR ERVL 0 442 424 5 811 1381 88 0 10 chr17 29648068 29648263 -65624388 + B2_Mm2 SINE B2 3 195 0 5 811 1550 178 147 28 chr17 29648263 29648635 -65624016 - RMER10A LTR ERVL -19 423 2 5 811 228 67 0 0 chr17 29648868 29648898 -65623753 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 811 441 267 44 26 chr17 29648902 29649028 -65623623 - B1_Mur1 SINE Alu -14 136 9 5 811 305 47 23 0 chr17 29649040 29649083 -65623568 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 5 811 839 107 2 16 chr17 29649085 29649220 -65623431 - B1_Mus1 SINE Alu -12 137 10 5 811 1408 94 16 0 chr17 29649232 29649424 -65623227 - B2_Mm2 SINE B2 0 195 1 5 811 357 264 17 68 chr17 29649543 29649661 -65622990 - PB1D9 SINE Alu -5 115 4 5 811 1231 62 0 0 chr17 29649713 29649859 -65622792 + B1_Mus2 SINE Alu 2 147 0 5 811 255 317 0 0 chr17 29649914 29649996 -65622655 - RSINE1 SINE B4 -2 163 82 5 811 1360 85 37 0 chr17 29650467 29650655 -65621996 + B2_Mm2 SINE B2 1 195 0 5 811 226 200 90 103 chr17 29650663 29650741 -65621910 + MT2B LTR ERVL 181 257 -344 5 811 522 123 0 47 chr17 29650675 29650760 -65621891 + B1_Mur3 SINE Alu 43 123 -26 5 811 1303 91 27 0 chr17 29650839 29651026 -65621625 - B2_Mm1t SINE B2 -1 192 1 5 811 244 298 222 16 chr17 29651049 29651080 -65621571 - RSINE1 SINE B4 -2 163 128 5 811 483 48 0 0 chr17 29651080 29651142 -65621509 + (TG)n Simple_repeat Simple_repeat 2 63 0 5 811 244 298 222 16 chr17 29651142 29651236 -65621415 - RSINE1 SINE B4 -38 127 13 5 811 493 249 149 71 chr17 29651713 29651968 -65620683 + B4A SINE B4 4 278 -14 5 811 399 312 34 74 chr17 29652023 29652172 -65620479 - B1_Mur1 SINE Alu -6 143 1 5 811 343 295 21 77 chr17 29652180 29652323 -65620328 - ID_B1 SINE B4 0 224 90 5 811 1264 20 0 7 chr17 29652479 29652627 -65620024 + B1_Mm SINE Alu 1 147 0 5 811 182 62 31 0 chr17 29652634 29652666 -65619985 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 5 811 1017 139 43 22 chr17 29652686 29652870 -65619781 + B2_Mm2 SINE B2 2 189 -6 5 811 1162 50 0 0 chr17 29652877 29653016 -65619635 + B1_Mus1 SINE Alu 1 139 -9 5 811 1333 102 17 0 chr17 29653016 29653193 -65619458 - B2_Mm2 SINE B2 -14 181 2 5 811 32 26 0 0 chr17 29653193 29653232 -65619419 + AT_rich Low_complexity Low_complexity 1 39 0 5 811 1405 76 16 26 chr17 29653232 29653422 -65619229 + B2_Mm2 SINE B2 1 188 -7 5 811 711 259 20 20 chr17 29653687 29653884 -65618767 + B3A SINE B2 2 198 0 5 811 751 213 22 0 chr17 29653897 29654033 -65618618 + B1_Mur1 SINE Alu 1 139 -10 5 811 769 50 44 110 chr17 29654128 29654264 -65618387 + B1_Mus2 SINE Alu 21 147 0 5 811 879 112 132 0 chr17 29654287 29654439 -65618212 + L1_Mus4 LINE L1 6465 6636 0 5 811 420 265 10 179 chr17 29654464 29654671 -65617980 + B4A SINE B4 3 174 -118 5 811 379 296 41 53 chr17 29654809 29654980 -65617671 + B3 SINE B2 7 175 -41 6 811 835 239 48 11 chr17 29655000 29655186 -65617465 + B3A SINE B2 2 194 -4 6 811 410 70 0 297 chr17 29655213 29655280 -65617371 - tRNA-Gly-GGY tRNA tRNA -2 72 30 6 811 1382 57 23 0 chr17 29655280 29655455 -65617196 - B2_Mm2 SINE B2 -16 179 1 6 811 410 70 0 297 chr17 29655455 29655488 -65617163 - tRNA-Gly-GGY tRNA tRNA -45 29 2 6 811 201 74 0 0 chr17 29655551 29655578 -65617073 + (A)n Simple_repeat Simple_repeat 1 27 0 6 811 1336 99 0 11 chr17 29655578 29655761 -65616890 - B2_Mm2 SINE B2 -14 181 1 6 811 249 159 0 0 chr17 29655820 29655864 -65616787 + CT-rich Low_complexity Low_complexity 1 44 0 6 811 1137 84 0 0 chr17 29655925 29656068 -65616583 + B1_Mus2 SINE Alu 1 143 -4 6 811 355 19 39 0 chr17 29656068 29656120 -65616531 + (CAA)n Simple_repeat Simple_repeat 1 54 0 6 811 320 134 343 0 chr17 29656983 29657050 -65615601 + ID_B1 SINE B4 127 216 -8 6 811 529 259 164 13 chr17 29657145 29657340 -65615311 - ORR1D1 LTR MaLR -66 318 93 6 811 573 104 72 10 chr17 29657340 29657437 -65615214 + ORR1D1 LTR MaLR 1 103 -271 6 811 345 326 47 37 chr17 29657389 29657580 -65615071 + ID_B1 SINE B4 17 209 -15 6 811 534 238 65 54 chr17 29657637 29657810 -65614841 - B3 SINE B2 -8 185 11 6 811 1008 79 0 54 chr17 29657818 29657965 -65614686 - B2_Mm2 SINE B2 -56 139 1 6 811 718 178 0 0 chr17 29658020 29658138 -65614513 - B3 SINE B2 -98 118 1 6 811 180 97 0 0 chr17 29658256 29658287 -65614364 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 6 811 524 319 49 37 chr17 29658314 29658558 -65614093 - B4A SINE B4 0 292 46 6 811 1199 55 0 14 chr17 29658667 29658815 -65613836 + B1_Mus2 SINE Alu 2 147 0 6 811 316 200 22 0 chr17 29658850 29658940 -65613711 + GA-rich Low_complexity Low_complexity 3 94 0 6 811 584 306 23 40 chr17 29658942 29659119 -65613532 + B3A SINE B2 1 174 -42 6 811 1620 37 11 0 chr17 29659135 29659324 -65613327 - B2_Mm1t SINE B2 -1 192 2 6 811 265 245 0 0 chr17 29659360 29659409 -65613242 - B1_Mur4 SINE Alu -100 50 2 6 811 476 263 0 6 chr17 29659872 29660052 -65612599 + (CA)n Simple_repeat Simple_repeat 1 179 0 6 811 252 304 42 28 chr17 29660159 29660230 -65612421 + ID4_ SINE ID 5 76 -7 6 811 2759 107 71 0 chr17 29660273 29660666 -65611985 + MTC LTR MaLR 1 421 0 6 811 265 311 32 38 chr17 29660686 29660781 -65611870 + MLT1A0 LTR MaLR 8 104 -261 6 811 857 123 49 28 chr17 29660781 29660909 -65611742 + B1_Mus1 SINE Alu 3 135 -13 6 811 279 0 0 0 chr17 29660909 29660940 -65611711 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 811 857 123 49 28 chr17 29660940 29660953 -65611698 + B1_Mus1 SINE Alu 136 147 -1 6 811 265 311 32 38 chr17 29660953 29661014 -65611637 + MLT1A0 LTR MaLR 105 162 -203 6 811 637 205 22 36 chr17 29661387 29661524 -65611127 + B1_Mur1 SINE Alu 13 147 -2 6 811 222 239 0 0 chr17 29661540 29661586 -65611065 + (TATG)n Simple_repeat Simple_repeat 3 48 0 6 811 500 292 55 7 chr17 29661707 29661852 -65610799 - RSINE1 SINE B4 0 165 14 6 811 742 144 16 0 chr17 29661927 29662052 -65610599 - B1_Mus2 SINE Alu 0 147 21 6 811 1451 87 0 15 chr17 29662071 29662269 -65610382 - B2_Mm2 SINE B2 0 195 1 6 811 797 262 48 19 chr17 29662284 29662305 -65610346 - B3 SINE B2 0 216 197 6 811 1649 146 140 40 chr17 29662305 29662595 -65610056 + ORR1C2 LTR MaLR 1 328 -56 6 811 369 0 0 0 chr17 29662595 29662636 -65610015 + (TTTTG)n Simple_repeat Simple_repeat 3 43 0 6 811 1649 146 140 40 chr17 29662636 29662694 -65609957 + ORR1C2 LTR MaLR 329 384 0 6 811 797 262 48 19 chr17 29662694 29662882 -65609769 - B3 SINE B2 -20 196 1 6 811 462 259 109 113 chr17 29663856 29664113 -65608538 + B4A SINE B4 1 256 -36 6 811 720 263 36 45 chr17 29664587 29664810 -65607841 + ID_B1 SINE B4 1 221 -3 6 811 670 233 9 42 chr17 29664834 29665003 -65607648 + RSINE1 SINE B4 1 165 0 6 811 1359 124 0 5 chr17 29665027 29665222 -65607429 + B2_Mm2 SINE B2 2 195 0 6 811 290 239 0 56 chr17 29665875 29665946 -65606705 - B3A SINE B2 -16 182 116 6 811 464 219 195 0 chr17 29666044 29666167 -65606484 - B1_Mur2 SINE Alu -1 148 2 6 811 411 254 15 83 chr17 29666181 29666314 -65606337 + MT2B LTR ERVL 153 276 -325 6 811 937 80 8 0 chr17 29666203 29666328 -65606323 + B1_Mus1 SINE Alu 10 135 -13 6 811 221 0 35 0 chr17 29666328 29666357 -65606294 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 6 811 314 45 23 0 chr17 29666370 29666414 -65606237 + (TCTA)n Simple_repeat Simple_repeat 3 47 0 6 811 198 0 0 0 chr17 29666426 29666448 -65606203 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 6 811 1234 61 0 0 chr17 29666467 29666614 -65606037 - B1_Mus1 SINE Alu -1 147 1 6 811 428 83 50 29 chr17 29666647 29666736 -65605915 - B1_Mur4 SINE Alu 0 150 18 6 811 1280 47 0 0 chr17 29666779 29666927 -65605724 + B1_Mus1 SINE Alu 1 148 0 6 811 204 40 0 0 chr17 29666927 29666952 -65605699 + (A)n Simple_repeat Simple_repeat 1 25 0 6 811 240 114 0 0 chr17 29666952 29666987 -65605664 - B4 SINE B4 -212 80 46 6 811 1844 160 8 78 chr17 29667020 29667392 -65605259 + ORR1D1 LTR MaLR 29 374 0 6 811 541 174 43 9 chr17 29667454 29667570 -65605081 - PB1D9 SINE Alu 0 120 1 6 811 325 0 44 0 chr17 29667699 29667744 -65604907 + (TC)n Simple_repeat Simple_repeat 1 47 0 6 811 285 29 0 0 chr17 29667744 29667777 -65604874 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 811 438 291 4 102 chr17 29667784 29668036 -65604615 - L1MA4 LINE L1 -369 5931 5681 6 811 458 289 161 4 chr17 29668037 29668273 -65604378 - MLT1F LTR MaLR -84 464 192 6 811 462 183 333 38 chr17 29668317 29668476 -65604175 - B3 SINE B2 -9 207 2 6 811 299 304 27 75 chr17 29669424 29669540 -65603111 + MLT1J LTR MaLR 42 154 -358 6 811 344 59 0 19 chr17 29669540 29669592 -65603059 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 6 811 299 304 27 75 chr17 29669592 29669613 -65603038 + MLT1J LTR MaLR 155 175 -337 6 811 624 114 228 0 chr17 29669613 29669727 -65602924 - B1_Mus1 SINE Alu -8 140 1 6 811 425 282 0 43 chr17 29669806 29669921 -65602730 - RSINE1 SINE B4 -8 157 48 6 811 256 245 78 141 chr17 29669924 29670052 -65602599 - PB1D7 SINE Alu 0 120 1 6 811 411 271 118 8 chr17 29669942 29670061 -65602590 - ID_B1 SINE B4 -20 204 73 6 811 561 267 151 0 chr17 29670419 29670591 -65602060 + B3A SINE B2 1 198 0 6 811 3335 164 72 7 chr17 29670622 29671316 -65601335 + Lx7 LINE L1 606 1344 -6384 6 811 1179 75 0 0 chr17 29671330 29671476 -65601175 + B1_Mus2 SINE Alu 2 147 0 6 811 516 105 0 0 chr17 29671476 29671552 -65601099 + (GAA)n Simple_repeat Simple_repeat 3 78 0 6 811 3745 137 31 46 chr17 29671553 29671976 -65600675 + Lx7 LINE L1 1346 1761 -4119 6 811 482 30 30 0 chr17 29671976 29672043 -65600608 + (TCTCTG)n Simple_repeat Simple_repeat 4 72 0 6 811 559 202 8 26 chr17 29672044 29672161 -65600490 - PB1D9 SINE Alu -5 115 1 6 811 3745 137 31 46 chr17 29672161 29672444 -65600207 + Lx7 LINE L1 1762 2056 -3824 6 811 588 29 0 0 chr17 29672444 29672514 -65600137 + (CA)n Simple_repeat Simple_repeat 2 71 0 6 811 3745 137 31 46 chr17 29672514 29672586 -65600065 + Lx7 LINE L1 2057 2115 -3765 6 811 1814 187 81 6 chr17 29672590 29672934 -65599717 + ORR1C1 LTR MaLR 1 370 -8 6 811 3560 153 94 38 chr17 29672936 29673744 -65598907 + Lx7 LINE L1 2113 2965 -2915 6 811 317 118 78 0 chr17 29673744 29673795 -65598856 - ORR1A3 LTR MaLR 0 326 272 6 811 810 77 0 0 chr17 29673800 29673904 -65598747 - B1_Mus2 SINE Alu -43 104 1 6 811 522 162 0 119 chr17 29673802 29673928 -65598723 - MT2B LTR ERVL -344 257 147 6 811 499 165 16 20 chr17 29673905 29674036 -65598615 - ORR1A3 LTR MaLR -41 353 224 6 811 6093 177 93 26 chr17 29674036 29674134 -65598517 + Lx7 LINE L1 4338 4431 -1449 6 811 1388 76 22 0 chr17 29674134 29674318 -65598333 + B2_Mm2 SINE B2 2 189 -6 6 811 6093 177 93 26 chr17 29674318 29675658 -65596993 + Lx7 LINE L1 4432 5872 -8 6 811 225 216 115 97 chr17 29675658 29675705 -65596946 - B2_Mm2 SINE B2 -21 174 118 6 811 261 83 0 0 chr17 29675705 29675741 -65596910 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 6 811 237 216 115 97 chr17 29675741 29675806 -65596845 - B3 SINE B2 -94 122 60 6 811 1189 101 6 12 chr17 29675817 29675988 -65596663 - B2_Mm1t SINE B2 -21 172 3 6 811 801 217 194 25 chr17 29675988 29676192 -65596459 + Lx7 LINE L1 5893 6151 -1545 6 811 2590 149 87 43 chr17 29676192 29676617 -65596034 + RLTR11A LTR ERVK 1 447 -81 6 811 1404 75 27 0 chr17 29676617 29676803 -65595848 - B2_Mm1a SINE B2 0 193 3 6 811 2590 149 87 43 chr17 29676803 29676883 -65595768 + RLTR11A LTR ERVK 448 528 0 6 811 801 217 194 25 chr17 29676883 29676961 -65595690 + Lx7 LINE L1 6152 6223 -1473 6 811 3114 215 70 86 chr17 29676973 29677246 -65595405 + Lx6 LINE L1 6581 6836 -624 6 811 1206 68 0 0 chr17 29677246 29677393 -65595258 + B1_Mus1 SINE Alu 2 148 0 6 811 3114 215 70 86 chr17 29677393 29677846 -65594805 + Lx6 LINE L1 6837 7292 -168 6 811 2711 61 0 3 chr17 29677846 29678174 -65594477 + ORR1A2 LTR MaLR 1 327 0 6 811 3114 215 70 86 chr17 29678174 29678337 -65594314 + Lx6 LINE L1 7293 7455 -5 6 811 393 274 182 10 chr17 29678534 29678737 -65593914 - MLT1H LTR MaLR -110 439 202 6 811 386 188 0 0 chr17 29679038 29679107 -65593544 - B1_Mur4 SINE Alu -74 74 6 6 811 239 29 57 0 chr17 29679112 29679147 -65593504 + (TTTTA)n Simple_repeat Simple_repeat 1 37 0 6 811 1353 77 27 6 chr17 29679158 29679341 -65593310 + B2_Mm2 SINE B2 1 187 -8 6 811 551 89 22 0 chr17 29679344 29679434 -65593217 + (GAAA)n Simple_repeat Simple_repeat 4 95 0 6 811 913 139 20 14 chr17 29679442 29679588 -65593063 + B1_Mur4 SINE Alu 3 149 -1 6 811 1113 98 0 0 chr17 29679607 29679781 -65592870 + (GGAA)n Simple_repeat Simple_repeat 4 177 0 6 811 264 263 26 0 chr17 29679904 29679980 -65592671 + L1ME3A LINE L1 5863 5940 -233 6 811 314 242 128 47 chr17 29680148 29680322 -65592329 + Cheshire DNA MER1_type 3 190 -2230 6 811 618 112 280 0 chr17 29680427 29680534 -65592117 + B1_Mus1 SINE Alu 2 138 -10 6 811 227 291 61 20 chr17 29680578 29680598 -65592053 - B2_Mm1t SINE B2 -99 99 38 6 811 298 279 44 0 chr17 29680598 29680666 -65591985 - RSINE1 SINE B4 -82 83 13 6 811 812 264 55 52 chr17 29680717 29681008 -65591643 - B4 SINE B4 0 292 1 6 811 453 152 9 156 chr17 29681030 29681103 -65591548 - B3A SINE B2 -62 136 74 7 811 1170 106 33 22 chr17 29681103 29681287 -65591364 - B2_Mm2 SINE B2 -9 186 1 7 811 453 152 9 156 chr17 29681287 29681322 -65591329 - B3A SINE B2 -125 73 44 7 811 444 211 32 0 chr17 29681317 29681412 -65591239 + B3 SINE B2 119 216 0 7 811 324 207 0 0 chr17 29681428 29681549 -65591102 + (TG)n Simple_repeat Simple_repeat 2 122 0 7 811 370 310 57 19 chr17 29681556 29681714 -65590937 - RSINE1 SINE B4 0 165 2 7 811 1199 62 0 0 chr17 29681813 29681959 -65590692 - B1_Mus2 SINE Alu 0 147 2 7 811 507 191 28 37 chr17 29681992 29682101 -65590550 - ID_B1 SINE B4 -12 212 105 7 811 360 273 74 8 chr17 29682101 29682114 -65590537 - B1F1 SINE Alu -12 137 8 7 811 336 143 0 0 chr17 29682189 29682245 -65590406 + (TTCC)n Simple_repeat Simple_repeat 4 59 0 7 811 380 145 0 14 chr17 29682245 29682315 -65590336 - B1_Mus2 SINE Alu 0 147 79 7 811 368 385 37 0 chr17 29682550 29682685 -65589966 + RSINE1 SINE B4 2 141 -24 7 811 1703 127 157 45 chr17 29682699 29683036 -65589615 - ORR1B1 LTR MaLR -19 375 1 7 811 641 227 55 0 chr17 29683036 29683164 -65589487 - B1_Mur1 SINE Alu -13 136 2 7 811 296 254 40 40 chr17 29683273 29683347 -65589304 + MER5A DNA MER1_type 36 109 -80 7 811 704 188 15 15 chr17 29683352 29683487 -65589164 - B1F SINE Alu -9 140 6 7 811 1159 71 0 0 chr17 29683694 29683834 -65588817 + B1_Mus1 SINE Alu 1 140 -8 7 811 207 0 0 0 chr17 29683834 29683857 -65588794 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 811 1226 203 5 0 chr17 29684171 29684383 -65588268 + B3 SINE B2 1 213 -3 7 811 241 314 126 21 chr17 29684606 29684749 -65587902 + RMER15 LTR ERVL 353 510 -65 7 811 1342 62 0 6 chr17 29684971 29685148 -65587503 - B2_Mm2 SINE B2 -19 176 1 7 811 363 291 23 87 chr17 29685154 29685168 -65587483 - B2_Mm1t SINE B2 -21 172 157 7 811 480 53 40 0 chr17 29685168 29685244 -65587407 + (TG)n Simple_repeat Simple_repeat 2 80 0 7 811 863 217 7 10 chr17 29685244 29685408 -65587243 - B3A SINE B2 -38 160 5 7 811 386 172 0 0 chr17 29685557 29685621 -65587030 + RSINE1 SINE B4 3 66 -99 7 811 500 0 17 0 chr17 29685651 29685711 -65586940 + (TC)n Simple_repeat Simple_repeat 1 61 0 7 811 270 208 52 0 chr17 29687904 29688000 -65584651 + CT-rich Low_complexity Low_complexity 4 104 0 7 811 227 331 38 88 chr17 29688024 29688183 -65584468 + Looper DNA PiggyBac 441 591 -967 7 811 381 43 0 0 chr17 29688568 29688615 -65584036 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 811 799 223 0 0 chr17 29688615 29688754 -65583897 - RSINE1 SINE B4 -24 141 3 7 811 201 195 0 0 chr17 29688876 29688917 -65583734 + (CAT)n Simple_repeat Simple_repeat 2 42 0 7 811 288 319 83 48 chr17 29688939 29689107 -65583544 + MIRb SINE MIR 93 266 -2 7 811 787 159 76 47 chr17 29689602 29689773 -65582878 + B2_Mm2 SINE B2 2 177 -18 7 811 1665 32 0 0 chr17 29689774 29689962 -65582689 + B2_Mm1a SINE B2 1 188 -5 7 811 872 128 0 45 chr17 29690015 29690170 -65582481 - B1_Mur2 SINE Alu 0 149 2 7 811 733 206 14 0 chr17 29690172 29690313 -65582338 - B1_Mur1 SINE Alu -1 148 6 7 811 634 257 85 50 chr17 29690317 29690518 -65582133 - B3 SINE B2 -2 214 7 7 811 921 238 16 0 chr17 29690535 29690720 -65581931 - B3 SINE B2 -28 188 1 7 811 443 216 45 0 chr17 29690746 29690834 -65581817 - B1F2 SINE Alu -1 148 57 7 811 711 194 0 73 chr17 29690839 29690989 -65581662 + B1_Mur4 SINE Alu 12 150 0 7 811 293 145 18 3 chr17 29691015 29691080 -65581571 + B1_Mus2 SINE Alu 84 148 -1 7 811 455 15 15 0 chr17 29691110 29691175 -65581476 + B2_Mm1a SINE B2 127 192 -1 7 811 314 221 29 0 chr17 29691215 29691283 -65581368 - PB1D9 SINE Alu -49 71 2 7 811 269 319 0 0 chr17 29691358 29691427 -65581224 + MIR SINE MIR 23 91 -171 7 811 670 259 21 0 chr17 29691911 29692054 -65580597 + RSINE1 SINE B4 8 153 -12 7 811 330 26 0 0 chr17 29692054 29692093 -65580558 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 811 716 215 81 10 chr17 29692632 29692829 -65579822 - B3 SINE B2 -4 212 2 7 811 902 187 40 61 chr17 29692857 29693085 -65579566 + ID_B1 SINE B4 2 224 0 7 811 266 289 47 35 chr17 29693137 29693159 -65579492 + PB1D7 SINE Alu 1 87 -33 7 811 324 234 0 0 chr17 29693159 29693223 -65579428 + ID_B1 SINE B4 102 165 -59 7 811 221 230 66 26 chr17 29694097 29694173 -65578478 + ID4 SINE ID 2 80 -3 7 811 327 202 0 0 chr17 29694175 29694254 -65578397 + GA-rich Low_complexity Low_complexity 2 80 0 7 811 487 323 51 13 chr17 29694275 29694432 -65578219 + RSINE1 SINE B4 3 165 0 7 811 344 274 236 0 chr17 29694697 29694803 -65577848 - B1F1 SINE Alu -13 136 6 7 811 25 31 0 0 chr17 29694916 29694948 -65577703 + AT_rich Low_complexity Low_complexity 1 32 0 7 811 296 229 138 9 chr17 29694959 29695049 -65577602 - B3 SINE B2 -58 140 43 7 811 675 210 113 5 chr17 29695885 29696040 -65576611 + B3 SINE B2 3 170 -46 7 811 345 75 0 0 chr17 29696043 29696096 -65576555 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 811 214 206 0 45 chr17 29696108 29696145 -65576506 + T-rich Low_complexity Low_complexity 27 63 0 7 811 1141 95 0 7 chr17 29696145 29696294 -65576357 - B1_Mus1 SINE Alu 0 148 1 7 811 214 206 0 45 chr17 29696294 29696322 -65576329 + T-rich Low_complexity Low_complexity 1 26 0 7 811 2429 227 67 90 chr17 29696341 29697687 -65574964 - Lx6 LINE L1 -4 7456 5749 7 811 765 32 0 0 chr17 29697687 29697780 -65574871 + BC1_Mm scRNA scRNA 2 94 -58 7 811 2429 227 67 90 chr17 29697780 29698016 -65574635 - Lx6 LINE L1 -4 5748 5447 7 811 1649 21 16 0 chr17 29698016 29698206 -65574445 - B2_Mm1a SINE B2 0 193 1 7 811 2429 149 21 177 chr17 29698206 29698336 -65574315 - Lx6 LINE L1 -434 5446 5311 7 811 474 236 201 0 chr17 29698357 29698501 -65574150 + MT2B LTR ERVL 92 264 -269 7 811 281 169 17 0 chr17 29698525 29698584 -65574067 + CT-rich Low_complexity Low_complexity 2 61 0 7 811 1023 97 139 0 chr17 29698630 29698795 -65573856 - B2_Mm1t SINE B2 -4 189 2 7 811 858 291 49 29 chr17 29698795 29699015 -65573636 + MT2B LTR ERVL 376 601 0 7 811 654 177 0 0 chr17 29699175 29699299 -65573352 + CT-rich Low_complexity Low_complexity 4 127 0 7 811 967 89 96 0 chr17 29699308 29699443 -65573208 + B1_Mur4 SINE Alu 3 150 0 7 811 228 67 0 0 chr17 29699576 29699606 -65573045 + (TG)n Simple_repeat Simple_repeat 2 31 0 7 811 602 274 15 0 chr17 29699606 29699741 -65572910 - RSINE1 SINE B4 -25 140 4 7 811 434 148 261 0 chr17 29699924 29700012 -65572639 - B1_Mur2 SINE Alu -1 148 38 7 811 683 286 26 0 chr17 29700269 29700423 -65572228 + B3 SINE B2 48 205 -11 7 811 644 226 23 0 chr17 29700449 29700582 -65572069 - B1_Mur3 SINE Alu -12 137 2 7 811 1303 60 60 5 chr17 29700683 29700867 -65571784 - B2_Mm2 SINE B2 -1 194 1 7 811 213 293 96 12 chr17 29701079 29701162 -65571489 - RSINE1 SINE B4 -75 90 1 7 811 463 204 0 190 chr17 29701559 29701638 -65571013 - B1_Mur2 SINE Alu -51 98 40 7 811 927 62 147 0 chr17 29701638 29701767 -65570884 - B1_Mus1 SINE Alu 0 148 1 7 811 463 204 0 190 chr17 29701767 29701808 -65570843 - B1_Mur2 SINE Alu -110 39 1 7 811 780 252 54 34 chr17 29701829 29701993 -65570658 - B3 SINE B2 -6 210 40 7 811 895 147 7 14 chr17 29701993 29702138 -65570513 - B1_Mus1 SINE Alu -3 145 2 7 811 780 252 54 34 chr17 29702138 29702178 -65570473 - B3 SINE B2 -177 39 2 7 811 1431 75 16 16 chr17 29702190 29702381 -65570270 - B2_Mm2 SINE B2 -3 192 2 7 811 536 211 9 18 chr17 29702392 29702503 -65570148 - PB1D10 SINE Alu -7 110 1 7 811 24 32 0 0 chr17 29702513 29702544 -65570107 + AT_rich Low_complexity Low_complexity 1 31 0 7 811 561 274 84 12 chr17 29702597 29702763 -65569888 - B3A SINE B2 -20 178 1 7 811 191 36 0 35 chr17 29702796 29702825 -65569826 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 7 811 290 132 0 19 chr17 29704193 29704247 -65568404 + CT-rich Low_complexity Low_complexity 2 54 0 7 811 833 182 52 62 chr17 29704265 29704476 -65568175 - B3 SINE B2 -6 210 2 7 811 241 293 56 76 chr17 29704956 29705100 -65567551 - MLT1J1 LTR MaLR -23 421 281 7 811 402 69 0 0 chr17 29710203 29710261 -65562390 + (GA)n Simple_repeat Simple_repeat 1 58 0 7 811 458 272 132 0 chr17 29710261 29710397 -65562254 - B3 SINE B2 -35 163 10 7 811 281 295 26 18 chr17 29710511 29710625 -65562026 + (CATATA)n Simple_repeat Simple_repeat 4 118 0 7 811 423 160 0 0 chr17 29710629 29710704 -65561947 + (CA)n Simple_repeat Simple_repeat 2 76 0 7 811 1319 46 79 28 chr17 29711016 29711180 -65561471 + B2_Mm1a SINE B2 2 160 -33 7 811 207 0 0 0 chr17 29711180 29711203 -65561448 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 7 811 1319 46 79 28 chr17 29711203 29711216 -65561435 + B2_Mm1a SINE B2 161 186 -7 7 811 555 214 86 64 chr17 29711506 29711646 -65561005 - B1F2 SINE Alu -1 148 6 7 811 391 240 156 0 chr17 29711658 29711754 -65560897 - PB1D10 SINE Alu -6 111 1 7 811 520 308 96 48 chr17 29712452 29712724 -65559927 - L1MB3 LINE L1 -72 6111 5810 7 811 258 250 140 88 chr17 29712724 29712860 -65559791 - RSINE1 SINE B4 -19 146 4 7 811 520 308 96 48 chr17 29712860 29713064 -65559587 - L1MB3 LINE L1 -374 5809 5612 7 811 206 271 17 0 chr17 29713389 29713448 -65559203 + C-rich Low_complexity Low_complexity 4 63 0 7 811 304 250 44 0 chr17 29714030 29714098 -65558553 - ID4 SINE ID -1 82 12 7 811 430 296 81 7 chr17 29714906 29715042 -65557609 - RSINE1 SINE B4 -14 151 6 7 811 212 162 0 0 chr17 29715142 29715179 -65557472 + CT-rich Low_complexity Low_complexity 2 38 0 7 811 602 197 97 15 chr17 29715185 29715319 -65557332 - B3 SINE B2 -5 211 67 8 811 336 207 193 11 chr17 29716530 29716618 -65556033 + PB1D10 SINE Alu 13 116 -1 8 811 546 223 156 6 chr17 29716973 29717140 -65555511 - B3 SINE B2 -14 202 11 8 811 416 267 50 0 chr17 29717200 29717301 -65555350 - B3 SINE B2 -4 212 107 8 811 549 261 15 0 chr17 29717484 29717614 -65555037 - RSINE1 SINE B4 -31 134 3 8 811 226 125 0 0 chr17 29718065 29718097 -65554554 - RSINE1 SINE B4 -51 114 83 8 811 583 218 150 12 chr17 29718212 29718379 -65554272 + B3 SINE B2 11 200 -16 8 811 211 167 23 23 chr17 29718390 29718433 -65554218 - B2_Mm1t SINE B2 -149 44 2 8 811 1571 178 131 10 chr17 29718504 29718867 -65553784 - RMER16 LTR ERVK 0 533 1 8 811 266 308 46 18 chr17 29719054 29719163 -65553488 - MLT1J LTR MaLR -105 407 296 8 811 285 135 0 0 chr17 29719164 29719216 -65553435 + (TG)n Simple_repeat Simple_repeat 2 53 0 8 811 583 323 38 38 chr17 29719232 29719493 -65553158 - B4A SINE B4 0 292 32 8 811 270 0 0 0 chr17 29719495 29719525 -65553126 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 811 883 116 106 44 chr17 29720031 29720060 -65552591 - B2_Mm2 SINE B2 -1 194 166 8 811 1205 68 0 13 chr17 29720060 29720209 -65552442 + B1_Mus1 SINE Alu 2 148 0 8 811 883 116 106 44 chr17 29720209 29720226 -65552425 - B2_Mm2 SINE B2 -30 165 145 8 811 225 0 0 0 chr17 29720226 29720251 -65552400 + (TA)n Simple_repeat Simple_repeat 2 26 0 8 811 883 116 106 44 chr17 29720251 29720383 -65552268 - B2_Mm2 SINE B2 -51 144 4 8 811 50 71 0 0 chr17 29720396 29720495 -65552156 + AT_rich Low_complexity Low_complexity 1 99 0 8 811 306 184 0 46 chr17 29720517 29720625 -65552026 + (TATG)n Simple_repeat Simple_repeat 1 103 0 8 811 284 314 105 48 chr17 29722259 29722383 -65550268 - RSINE1 SINE B4 -29 136 6 8 811 622 190 33 72 chr17 29722411 29722564 -65550087 - B1_Mur2 SINE Alu -1 148 2 8 811 185 86 0 54 chr17 29722702 29722739 -65549912 + (CACCC)n Simple_repeat Simple_repeat 1 35 0 8 811 240 288 57 90 chr17 29722947 29723069 -65549582 - RSINE1 SINE B4 -45 120 3 8 811 873 155 14 14 chr17 29723303 29723447 -65549204 + B1_Mur3 SINE Alu 5 148 -1 8 811 467 144 77 13 chr17 29724234 29724349 -65548302 + B1_Mur4 SINE Alu 37 149 -1 8 811 342 18 0 52 chr17 29724353 29724411 -65548240 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 8 811 619 191 141 87 chr17 29724572 29724756 -65547895 - B3A SINE B2 0 198 5 8 811 824 243 22 6 chr17 29724784 29724962 -65547689 - B3A SINE B2 -16 182 2 8 811 530 269 0 0 chr17 29725346 29725450 -65547201 + PB1 SINE Alu 24 127 0 8 811 239 191 47 16 chr17 29725506 29725570 -65547081 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 8 811 279 0 0 0 chr17 29725649 29725680 -65546971 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 8 811 738 269 33 14 chr17 29725680 29725891 -65546760 - B4A SINE B4 -77 215 1 8 811 414 0 0 0 chr17 29725927 29725973 -65546678 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 8 811 798 130 130 0 chr17 29725977 29726100 -65546551 - B1_Mur2 SINE Alu -10 139 1 8 811 818 215 25 12 chr17 29727151 29727311 -65545340 + RSINE1 SINE B4 4 165 0 8 811 202 229 142 9 chr17 29727611 29727717 -65544934 - MIR SINE MIR -123 139 20 8 811 454 290 0 0 chr17 29727871 29727978 -65544673 + PB1D10 SINE Alu 2 108 -9 8 811 348 308 101 45 chr17 29728023 29728288 -65544363 + B4A SINE B4 2 291 -1 8 811 627 220 262 0 chr17 29728311 29728479 -65544172 + B3 SINE B2 5 216 0 8 811 859 246 9 59 chr17 29728482 29728702 -65543949 + B3 SINE B2 3 211 -5 8 811 27 0 0 0 chr17 29728729 29728756 -65543895 + AT_rich Low_complexity Low_complexity 1 27 0 8 811 1171 88 0 0 chr17 29729063 29729211 -65543440 - B1_Mus1 SINE Alu 0 148 1 8 811 1747 16 0 0 chr17 29729491 29729683 -65542968 + B2_Mm1a SINE B2 2 193 0 8 811 414 0 0 0 chr17 29730027 29730073 -65542578 + (TCTCTG)n Simple_repeat Simple_repeat 1 46 0 8 811 584 224 51 29 chr17 29730118 29730256 -65542395 + RSINE1 SINE B4 3 143 -22 8 811 756 182 79 45 chr17 29730723 29730901 -65541750 + B3 SINE B2 3 186 -30 8 811 396 0 0 0 chr17 29731080 29731124 -65541527 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 811 30 59 0 0 chr17 29732069 29732120 -65540531 + AT_rich Low_complexity Low_complexity 1 51 0 8 811 903 148 207 17 chr17 29732121 29732151 -65540500 - B3 SINE B2 -1 215 187 8 811 396 40 0 0 chr17 29732151 29732201 -65540450 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 811 903 148 207 17 chr17 29732201 29732349 -65540302 - B3 SINE B2 -30 186 3 8 811 523 250 184 0 chr17 29732349 29732501 -65540150 - B3A SINE B2 -18 180 1 8 811 386 250 50 33 chr17 29732556 29732676 -65539975 + B4 SINE B4 169 290 -2 8 811 4904 94 98 89 chr17 29733882 29734780 -65537871 - RMER17A2 LTR ERVK 0 906 1 8 811 523 212 188 8 chr17 29734974 29735107 -65537544 + RSINE1 SINE B4 3 159 -6 8 811 206 81 27 0 chr17 29735121 29735158 -65537493 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 811 200 74 34 85 chr17 29735433 29735447 -65537204 + A-rich Low_complexity Low_complexity 2 16 0 8 811 1033 23 123 0 chr17 29735447 29735577 -65537074 + B1_Mus2 SINE Alu 2 147 0 8 811 200 74 34 85 chr17 29735577 29735621 -65537030 + A-rich Low_complexity Low_complexity 17 57 0 8 811 366 321 78 7 chr17 29735649 29735790 -65536861 - RSINE1 SINE B4 -13 152 2 8 811 458 318 40 23 chr17 29735844 29736021 -65536630 + B3A SINE B2 1 180 -18 8 811 1142 49 14 7 chr17 29736268 29736413 -65536238 + B1_Mm SINE Alu 2 147 0 8 811 394 343 121 4 chr17 29737446 29737695 -65534956 - L2a LINE L2 -227 3199 2922 8 811 202 345 136 0 chr17 29737760 29737980 -65534671 - L2a LINE L2 -616 2803 2554 8 811 534 279 21 14 chr17 29738047 29738189 -65534462 + ID_B1 SINE B4 82 224 0 8 811 255 60 19 39 chr17 29738691 29738743 -65533908 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 8 811 414 195 0 0 chr17 29738770 29738852 -65533799 - ID_B1 SINE B4 -22 202 121 8 811 284 298 7 101 chr17 29738852 29738904 -65533747 - B1F SINE Alu -22 123 3 8 811 204 40 0 0 chr17 29738983 29739008 -65533643 + (TCCCC)n Simple_repeat Simple_repeat 4 28 0 8 811 571 141 85 6 chr17 29739021 29739185 -65533466 - RMER17C LTR ERVK -137 273 97 8 811 1217 83 41 6 chr17 29739451 29739621 -65533030 - B2_Mm2 SINE B2 -18 177 2 8 811 992 111 35 0 chr17 29739647 29739791 -65532860 - B1_Mur4 SINE Alu 0 150 2 8 811 850 218 50 0 chr17 29739817 29739996 -65532655 - B3 SINE B2 0 216 29 8 811 651 231 0 0 chr17 29740696 29740826 -65531825 + RSINE1 SINE B4 3 132 -33 8 811 392 214 110 20 chr17 29740877 29740977 -65531674 - PB1D9 SINE Alu -11 109 1 8 811 888 176 11 61 chr17 29740993 29741174 -65531477 - B3 SINE B2 -8 208 37 8 811 362 218 333 32 chr17 29741196 29741352 -65531299 - B4 SINE B4 -88 204 2 8 811 26 0 0 0 chr17 29741363 29741389 -65531262 + AT_rich Low_complexity Low_complexity 1 26 0 8 811 182 256 13 0 chr17 29742628 29742706 -65529945 + (TG)n Simple_repeat Simple_repeat 1 79 0 8 811 353 58 19 0 chr17 29742732 29742784 -65529867 + (TG)n Simple_repeat Simple_repeat 2 54 0 8 811 701 117 0 28 chr17 29744036 29744177 -65528474 + (CAGA)n Simple_repeat Simple_repeat 2 138 0 8 811 310 273 40 0 chr17 29744426 29744525 -65528126 + 5S rRNA rRNA 1 103 -18 8 811 395 263 0 21 chr17 29744552 29744649 -65528002 - ID_B1 SINE B4 -12 212 118 8 811 536 283 7 19 chr17 29744888 29745043 -65527608 - B3A SINE B2 0 198 46 8 811 1616 37 21 0 chr17 29745420 29745608 -65527043 - B2_Mm1a SINE B2 0 193 2 8 811 1307 89 32 27 chr17 29745877 29746062 -65526589 + B2_Mm2 SINE B2 2 187 -8 8 811 490 114 32 64 chr17 29746115 29746209 -65526442 + B1_Mus2 SINE Alu 57 147 0 8 811 1086 94 0 0 chr17 29746315 29746453 -65526198 - B1_Mus1 SINE Alu -9 139 2 8 811 1204 57 0 0 chr17 29746593 29746733 -65525918 - B1_Mm SINE Alu -6 141 2 8 811 687 255 13 7 chr17 29746839 29746989 -65525662 + B3A SINE B2 2 152 -46 8 811 228 181 56 0 chr17 29747248 29747320 -65525331 + CT-rich Low_complexity Low_complexity 4 79 0 8 811 1059 67 34 0 chr17 29747855 29748004 -65524647 + B2_Mm2 SINE B2 1 154 -41 8 811 852 237 16 16 chr17 29748108 29748301 -65524350 + ID_B1 SINE B4 16 208 -16 8 811 258 333 50 21 chr17 29748195 29748336 -65524315 - YREP_Mm Unknown Unknown -1517 295 151 8 811 312 219 27 0 chr17 29749535 29749608 -65523043 + tRNA-Ala-GCY_ tRNA tRNA 1 75 0 8 811 204 67 0 0 chr17 29749609 29749639 -65523012 + (TAA)n Simple_repeat Simple_repeat 1 30 0 8 811 225 100 0 0 chr17 29749793 29749833 -65522818 + RMER4B LTR ERVK 1 40 -545 8 811 1252 97 37 5 chr17 29749860 29750047 -65522604 + B2_Mm2 SINE B2 1 193 -2 8 811 1193 68 0 7 chr17 29750060 29750207 -65522444 + B1_Mus1 SINE Alu 1 146 -2 8 811 857 182 85 5 chr17 29750233 29750421 -65522230 + B3 SINE B2 8 210 -6 8 811 577 204 0 0 chr17 29750450 29750553 -65522098 + B3 SINE B2 101 203 -13 8 811 1319 91 36 41 chr17 29750557 29750752 -65521899 - B2_Mm2 SINE B2 0 195 2 8 811 425 170 22 11 chr17 29751162 29751251 -65521400 - ID_B1 SINE B4 0 224 135 8 811 294 223 86 19 chr17 29751251 29751266 -65521385 - B1F SINE Alu 0 148 38 8 811 457 256 72 32 chr17 29751496 29751621 -65521030 - RSINE1 SINE B4 -23 142 13 9 811 320 247 2 13 chr17 29752577 29752668 -65519983 - ID_B1 SINE B4 -201 91 1 9 811 2116 150 64 49 chr17 29752857 29753264 -65519387 + MTC LTR MaLR 1 413 -8 9 812 640 231 23 64 chr17 29754828 29754999 -65517652 - RSINE1 SINE B4 0 165 2 9 812 183 262 46 62 chr17 29755356 29755421 -65517230 - L2a LINE L2 -341 3085 3022 9 812 687 156 23 0 chr17 29755813 29755941 -65516710 + B1_Mur1 SINE Alu 18 148 -1 9 812 648 45 0 0 chr17 29755975 29756063 -65516588 + B1_Mur4 SINE Alu 63 150 0 9 812 690 154 270 29 chr17 29756699 29756873 -65515778 + B3 SINE B2 1 216 0 9 812 322 257 68 103 chr17 29757012 29757129 -65515522 + RLTR25B LTR ERVK 875 987 -41 9 812 696 23 0 0 chr17 29757355 29757442 -65515209 + B1_Mm SINE Alu 61 147 0 9 812 974 16 0 0 chr17 29757516 29757637 -65515014 - B1_Mus1 SINE Alu -15 133 13 9 812 701 250 52 29 chr17 29757653 29757863 -65514788 - B3 SINE B2 0 216 2 9 812 882 95 78 35 chr17 29757897 29758039 -65514612 - B1_Mur3 SINE Alu -1 148 1 9 812 1224 55 7 0 chr17 29758077 29758223 -65514428 - B1_Mus2 SINE Alu 0 147 1 9 812 182 37 37 0 chr17 29758287 29758314 -65514337 + (GGA)n Simple_repeat Simple_repeat 1 28 0 9 812 411 249 148 11 chr17 29758644 29758827 -65513824 - B3 SINE B2 -7 209 2 9 812 432 311 23 58 chr17 29758873 29759044 -65513607 - B3A SINE B2 0 198 34 9 812 948 183 102 0 chr17 29759403 29759589 -65513062 - B3 SINE B2 -5 211 7 9 812 462 284 31 86 chr17 29759621 29759783 -65512868 + B4A SINE B4 2 154 -138 9 812 307 145 86 14 chr17 29759842 29759912 -65512739 + L1M5 LINE L1 5146 5220 -926 9 812 408 290 88 9 chr17 29759981 29760243 -65512408 + L1M5 LINE L1 5297 5584 -2458 9 812 279 122 0 0 chr17 29760252 29760301 -65512350 + (TG)n Simple_repeat Simple_repeat 2 50 0 9 812 325 312 26 35 chr17 29760442 29760558 -65512093 + PB1D10 SINE Alu 2 116 -1 9 812 333 305 158 25 chr17 29760575 29760733 -65511918 + B4A SINE B4 34 212 -80 9 812 304 265 148 22 chr17 29760710 29760845 -65511806 + B3A SINE B2 16 167 -31 9 812 660 190 0 16 chr17 29760848 29760971 -65511680 + B1_Mur1 SINE Alu 29 149 0 9 812 207 100 0 0 chr17 29760971 29761001 -65511650 + (TAAAAA)n Simple_repeat Simple_repeat 6 35 0 9 812 1002 109 7 26 chr17 29761004 29761155 -65511496 + B1_Mus1 SINE Alu 1 148 0 9 812 508 292 95 6 chr17 29761190 29761359 -65511292 + B3A SINE B2 4 187 -11 9 812 1248 141 173 135 chr17 29761936 29761995 -65510656 - ORR1B1 LTR MaLR 0 394 351 9 812 1238 41 0 7 chr17 29761995 29762143 -65510508 - B1_Mus2 SINE Alu 0 147 1 9 812 1248 141 173 135 chr17 29762143 29762453 -65510198 - ORR1B1 LTR MaLR -44 350 11 9 812 214 361 48 16 chr17 29762556 29762680 -65509971 - MIR SINE MIR -112 150 23 9 812 212 291 189 41 chr17 29762823 29762945 -65509706 - MIRb SINE MIR -115 153 14 9 812 2154 169 14 45 chr17 29766461 29766883 -65505768 - RLTR9E LTR ERVK 0 409 1 9 812 698 152 17 17 chr17 29766936 29767056 -65505595 + PB1D9 SINE Alu 1 120 0 9 812 1247 51 17 17 chr17 29767294 29767312 -65505339 - B2_Mm1a SINE B2 -13 180 162 9 812 270 0 0 0 chr17 29767312 29767342 -65505309 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 9 812 1247 51 17 17 chr17 29767342 29767502 -65505149 - B2_Mm1a SINE B2 -32 161 3 9 812 246 32 0 0 chr17 29767591 29767622 -65505029 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 812 347 297 61 23 chr17 29767648 29767779 -65504872 + B3A SINE B2 61 196 -2 9 812 452 301 71 13 chr17 29767780 29767935 -65504716 - RSINE1 SINE B4 0 165 2 9 812 1166 75 0 7 chr17 29767952 29768100 -65504551 - B1_Mus1 SINE Alu 0 148 2 9 812 428 353 81 0 chr17 29768940 29769195 -65503456 - MER102a DNA MER1_type -5 325 68 9 812 234 0 0 0 chr17 29769273 29769299 -65503352 + (T)n Simple_repeat Simple_repeat 1 26 0 9 812 1115 82 7 0 chr17 29769299 29769446 -65503205 - B1_Mus1 SINE Alu 0 148 1 9 812 258 164 0 141 chr17 29769640 29769711 -65502940 - B1_Mm SINE Alu -6 141 81 9 812 276 219 25 76 chr17 29769742 29769821 -65502830 - ID_B1 SINE B4 -4 220 146 9 812 892 207 73 87 chr17 29769877 29770012 -65502639 - B3 SINE B2 -12 204 70 9 812 1225 34 0 20 chr17 29770012 29770161 -65502490 + B1_Mus2 SINE Alu 2 147 0 9 812 892 207 73 87 chr17 29770161 29770231 -65502420 - B3 SINE B2 -147 69 2 9 812 682 216 185 11 chr17 29770340 29770518 -65502133 + B3 SINE B2 2 210 -6 9 812 466 336 126 22 chr17 29771138 29771415 -65501236 - MLT1A0 LTR MaLR -4 361 56 9 812 1134 82 0 0 chr17 29772076 29772223 -65500428 + B1_Mus2 SINE Alu 1 147 0 9 812 234 0 0 0 chr17 29772225 29772251 -65500400 + (A)n Simple_repeat Simple_repeat 1 26 0 9 812 952 120 223 27 chr17 29773510 29773698 -65498953 - URR1B DNA MER1_type 0 225 1 9 812 1173 94 72 0 chr17 29774637 29774667 -65497984 - B2_Mm2 SINE B2 -1 194 159 9 812 306 0 0 0 chr17 29774667 29774701 -65497950 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 9 812 1173 94 72 0 chr17 29774701 29774851 -65497800 - B2_Mm2 SINE B2 -37 158 2 9 812 825 241 60 5 chr17 29775354 29775554 -65497097 + B3 SINE B2 2 212 -4 9 812 224 325 12 24 chr17 29776040 29776122 -65496529 - B1_Mus2 SINE Alu -66 81 1 9 812 349 212 12 12 chr17 29776744 29776825 -65495826 - PB1D7 SINE Alu -6 114 34 9 812 201 100 24 24 chr17 29776844 29776885 -65495766 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 9 812 1148 81 0 20 chr17 29776885 29777036 -65495615 - B1_Mus1 SINE Alu 0 148 1 9 812 615 252 161 54 chr17 29777210 29777470 -65495181 + B4 SINE B4 3 290 -2 9 812 1189 22 0 0 chr17 29778677 29778811 -65493840 + B1_Mm SINE Alu 1 134 -13 9 812 221 0 35 0 chr17 29778811 29778840 -65493811 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 9 812 931 101 42 42 chr17 29779102 29779267 -65493384 - B2_Mm2 SINE B2 -5 190 26 9 812 1184 42 28 0 chr17 29779726 29779869 -65492782 + B1_Mus1 SINE Alu 1 147 -1 9 812 416 66 0 76 chr17 29780057 29780123 -65492528 - B2_Mm2 SINE B2 -133 62 2 9 812 399 288 54 0 chr17 29780192 29780303 -65492348 - ID_B1 SINE B4 -10 214 98 9 812 636 207 74 0 chr17 29780474 29780609 -65492042 - B1_Mur4 SINE Alu -1 149 5 9 812 612 291 69 18 chr17 29780626 29780843 -65491808 - B4 SINE B4 -63 229 2 9 812 819 223 28 16 chr17 29781029 29781239 -65491412 - B3A SINE B2 -14 202 1 9 812 1480 53 5 21 chr17 29781357 29781548 -65491103 - B2_Mm2 SINE B2 -5 190 3 9 812 478 239 85 55 chr17 29781584 29781783 -65490868 - B3 SINE B2 -11 205 1 9 812 1414 94 16 0 chr17 29781972 29782163 -65490488 - B2_Mm2 SINE B2 0 195 2 9 812 243 174 0 0 chr17 29782177 29782223 -65490428 - RLTR15 LTR ERVK -128 231 186 9 812 856 212 98 61 chr17 29782213 29782490 -65490161 - RLTR12B LTR ERVK -195 333 47 9 812 438 20 0 0 chr17 29782885 29782936 -65489715 + (TG)n Simple_repeat Simple_repeat 2 52 0 9 812 255 31 0 0 chr17 29782947 29782979 -65489672 + (TGG)n Simple_repeat Simple_repeat 2 33 0 9 812 260 329 49 10 chr17 29783049 29783148 -65489503 + MIR SINE MIR 13 118 -90 9 812 487 243 103 5 chr17 29783423 29783591 -65489060 - B3 SINE B2 0 216 34 9 812 653 118 11 21 chr17 29783620 29783741 -65488910 - B1_Mur4 SINE Alu 0 120 1 9 812 1391 198 236 20 chr17 29784379 29784777 -65487874 - RMER15 LTR ERVL -91 484 1 9 812 260 222 0 14 chr17 29785032 29785105 -65487546 + CT-rich Low_complexity Low_complexity 1 72 0 9 812 483 284 82 4 chr17 29785332 29785565 -65487086 + L1MC4 LINE L1 7676 7926 -116 9 812 806 178 20 7 chr17 29785626 29785773 -65486878 + B1_Mur3 SINE Alu 1 149 0 9 812 1212 57 19 6 chr17 29786037 29786195 -65486456 - B2_Mm2 SINE B2 -9 186 27 9 812 875 138 43 0 chr17 29786224 29786362 -65486289 - B2_Mm2 SINE B2 -50 145 2 9 812 999 75 7 33 chr17 29786390 29786541 -65486110 - B1_Mus2 SINE Alu 0 147 1 9 812 635 205 36 93 chr17 29786543 29786737 -65485914 - B2_Mm2 SINE B2 -11 184 2 9 812 564 186 112 8 chr17 29786740 29786865 -65485786 - B1_Mur2 SINE Alu 0 149 12 9 812 301 318 58 51 chr17 29786865 29786895 -65485756 - B4 SINE B4 -66 225 70 9 812 225 130 43 0 chr17 29786928 29786974 -65485677 - B1_Mur4 SINE Alu 0 150 103 9 812 275 245 17 143 chr17 29787074 29787086 -65485565 + MT2B LTR ERVL 154 208 -393 9 812 872 163 0 33 chr17 29787086 29787137 -65485514 + B1_Mus2 SINE Alu 1 51 -96 9 812 4096 60 73 27 chr17 29787137 29787698 -65484953 - LTRIS_Mus LTR ERV1 0 587 1 9 812 275 245 17 143 chr17 29787698 29787753 -65484898 + MT2B LTR ERVL 209 257 -344 9 812 872 163 0 33 chr17 29787753 29787798 -65484853 + B1_Mus2 SINE Alu 52 147 0 9 812 213 39 0 0 chr17 29787819 29787845 -65484806 + (GA)n Simple_repeat Simple_repeat 2 27 0 9 812 1440 55 44 0 chr17 29787886 29788067 -65484584 - B2_Mm2 SINE B2 -6 189 1 9 812 2657 52 61 0 chr17 29788187 29788513 -65484138 + ORR1A1 LTR MaLR 1 346 0 9 812 1004 321 119 119 chr17 29788542 29789521 -65483130 + Charlie24 DNA MER1_type 883 1861 -589 9 812 780 258 15 35 chr17 29789706 29789907 -65482744 + B3A SINE B2 2 198 0 9 812 697 143 82 89 chr17 29789932 29790078 -65482573 + B1_Mus1 SINE Alu 3 147 -1 9 812 252 196 43 0 chr17 29790097 29790143 -65482508 + B2_Mm2 SINE B2 10 57 -138 9 812 343 299 37 9 chr17 29790121 29790229 -65482422 + B3 SINE B2 99 209 -7 1 812 496 248 0 90 chr17 29790359 29790492 -65482159 - RSINE1 SINE B4 0 165 45 1 812 328 341 106 30 chr17 29790558 29790794 -65481857 - L1ME2 LINE L1 -3 6161 5908 1 812 524 240 76 9 chr17 29790795 29790956 -65481695 + MTE2a LTR MaLR 68 236 -143 1 812 194 0 39 0 chr17 29791078 29791104 -65481547 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 1 812 1006 66 80 0 chr17 29791104 29791241 -65481410 - B1_Mus1 SINE Alu 0 148 1 1 812 591 233 140 36 chr17 29791241 29791451 -65481200 - L1MEf LINE L1 -2388 3758 3528 1 812 957 222 77 118 chr17 29791451 29791800 -65480851 + MTE2a LTR MaLR 3 335 -44 1 812 180 0 0 0 chr17 29791800 29791820 -65480831 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1 812 957 222 77 118 chr17 29791820 29791859 -65480792 + MTE2a LTR MaLR 336 375 -4 1 812 556 271 96 128 chr17 29791859 29791901 -65480750 - L1MEf LINE L1 -2619 3527 3506 1 812 1156 56 21 0 chr17 29791901 29792045 -65480606 - B1_Mm SINE Alu 0 147 1 1 812 556 271 96 128 chr17 29792045 29792345 -65480306 - L1MEf LINE L1 -2641 3505 3209 1 812 26 0 0 27 chr17 29792494 29792512 -65480139 + AT_rich Low_complexity Low_complexity 1 18 0 1 812 1350 94 17 0 chr17 29792512 29792693 -65479958 - B2_Mm2 SINE B2 -11 184 1 1 812 26 0 0 27 chr17 29792693 29792711 -65479940 + AT_rich Low_complexity Low_complexity 1 18 0 1 812 1148 68 0 0 chr17 29792721 29792867 -65479784 - B1_Mus2 SINE Alu 0 147 2 1 812 328 274 140 62 chr17 29792875 29793091 -65479560 - L1MEf LINE L1 -4271 1971 1724 1 812 1277 42 139 0 chr17 29793091 29793257 -65479394 + B2_Mm1t SINE B2 2 190 -3 1 812 328 274 140 62 chr17 29793257 29793297 -65479354 - L1MEf LINE L1 -4519 1723 1695 1 812 28 0 0 0 chr17 29793313 29793341 -65479310 + AT_rich Low_complexity Low_complexity 1 28 0 1 812 207 227 53 0 chr17 29793341 29793416 -65479235 + (TATAA)n Simple_repeat Simple_repeat 4 82 0 1 812 369 0 0 0 chr17 29793417 29793458 -65479193 + (TTA)n Simple_repeat Simple_repeat 3 43 0 1 812 512 220 0 0 chr17 29793458 29793549 -65479102 - PB1D9 SINE Alu -18 102 12 1 812 326 256 11 95 chr17 29793554 29793649 -65479002 - B1F SINE Alu -6 143 57 1 812 306 0 0 0 chr17 29793716 29793750 -65478901 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 1 812 1233 85 17 22 chr17 29793761 29793776 -65478875 - B2_Mm2 SINE B2 -1 194 181 1 812 1166 75 0 0 chr17 29793776 29793923 -65478728 - B1_Mus1 SINE Alu 0 148 2 1 812 1233 85 17 22 chr17 29793923 29794088 -65478563 - B2_Mm2 SINE B2 -15 180 15 1 812 474 65 0 0 chr17 29794152 29794214 -65478437 + (TCCC)n Simple_repeat Simple_repeat 4 65 0 1 812 444 174 120 20 chr17 29794217 29794317 -65478334 - B1_Mur1 SINE Alu 0 149 40 1 812 261 237 0 84 chr17 29794243 29794326 -65478325 - MT2B LTR ERVL -337 264 189 1 812 1245 35 0 0 chr17 29794403 29794548 -65478103 + B1_Mus2 SINE Alu 1 145 -2 1 812 207 0 0 0 chr17 29794548 29794571 -65478080 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 812 1108 53 8 0 chr17 29794583 29794716 -65477935 + B1_Mm SINE Alu 2 135 -12 1 812 252 0 0 0 chr17 29794716 29794744 -65477907 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 812 218 321 42 67 chr17 29794754 29794874 -65477777 + RSINE1 SINE B4 1 117 -48 1 812 180 111 0 0 chr17 29795775 29795802 -65476849 + (AGGGGG)n Simple_repeat Simple_repeat 1 27 0 1 812 1013 178 96 0 chr17 29795967 29796164 -65476487 + B3 SINE B2 1 216 0 1 812 213 362 24 36 chr17 29796353 29796436 -65476215 - ID2 SINE ID 0 83 2 1 812 1242 27 7 0 chr17 29796530 29796676 -65475975 - B1_Mus2 SINE Alu 0 147 1 1 812 831 183 0 7 chr17 29796779 29796922 -65475729 - B1_Mur2 SINE Alu -7 142 1 1 812 22 0 0 0 chr17 29797550 29797572 -65475079 + GC_rich Low_complexity Low_complexity 1 22 0 1 812 21 57 0 0 chr17 29797725 29797760 -65474891 + GC_rich Low_complexity Low_complexity 1 35 0 1 812 1080 78 28 0 chr17 29798836 29798978 -65473673 - B1_Mus2 SINE Alu 0 147 2 1 812 471 246 65 42 chr17 29798987 29799133 -65473518 - B3A SINE B2 0 195 52 1 812 276 30 0 0 chr17 29799159 29799192 -65473459 + (T)n Simple_repeat Simple_repeat 1 33 0 1 812 226 247 25 49 chr17 29799368 29799449 -65473202 + MurSatRep1 Unknown Unknown 233 311 -1826 1 812 216 0 0 0 chr17 29800394 29800418 -65472233 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 812 567 91 0 0 chr17 29800418 29800495 -65472156 - B1_Mur4 SINE Alu -10 140 64 1 812 1233 28 7 0 chr17 29800675 29800820 -65471831 + B1_Mus2 SINE Alu 2 147 0 1 812 468 51 0 0 chr17 29801151 29801210 -65471441 + (TTCC)n Simple_repeat Simple_repeat 3 61 0 1 812 784 211 7 7 chr17 29801220 29801368 -65471283 - B1_Mur2 SINE Alu -1 148 1 1 812 543 291 153 49 chr17 29801382 29801729 -65470922 - MLT1C LTR MaLR -14 453 71 1 812 297 259 24 12 chr17 29802078 29802160 -65470491 + PB1 SINE Alu 41 123 -4 1 812 1133 45 192 0 chr17 29802514 29802670 -65469981 - B2_Mm2 SINE B2 -6 189 4 1 812 844 149 57 0 chr17 29802679 29802820 -65469831 - B1_Mur3 SINE Alu 0 149 1 1 812 201 167 0 0 chr17 29802852 29802888 -65469763 + A-rich Low_complexity Low_complexity 1 36 0 1 812 259 241 47 71 chr17 29806066 29806151 -65466500 - ID4 SINE ID 0 83 1 1 812 326 277 76 97 chr17 29806202 29806228 -65466423 - B4 SINE B4 -49 243 103 1 812 844 110 8 0 chr17 29806228 29806346 -65466305 - B1_Mur3 SINE Alu -13 136 18 1 812 306 0 0 0 chr17 29806395 29806429 -65466222 + (TTG)n Simple_repeat Simple_repeat 3 36 0 1 812 477 336 23 0 chr17 29806462 29806590 -65466061 - RSINE1 SINE B4 -33 132 2 1 812 1769 110 128 0 chr17 29806741 29807031 -65465620 - ORR1A2 LTR MaLR 0 327 1 1 812 235 338 42 0 chr17 29807487 29807558 -65465093 - AluF_3 SINE Alu -101 210 137 1 812 272 294 47 0 chr17 29807697 29807782 -65464869 + B3A SINE B2 80 168 -30 1 812 216 0 0 0 chr17 29807787 29807811 -65464840 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 812 471 174 47 0 chr17 29807811 29807897 -65464754 - B1_Mus2 SINE Alu -6 141 52 1 812 254 157 108 0 chr17 29807890 29807946 -65464705 + MTD LTR MaLR 305 353 -6 1 812 2878 251 83 119 chr17 29807946 29808857 -65463794 + MTD-int LTR MaLR 1 920 -338 1 812 795 157 57 0 chr17 29808857 29808997 -65463654 - B1_Mur3 SINE Alu 0 149 2 1 812 2878 251 83 119 chr17 29808997 29809032 -65463619 + MTD-int LTR MaLR 921 944 -314 1 812 1193 68 0 0 chr17 29809032 29809179 -65463472 + B1_Mus1 SINE Alu 2 148 0 1 812 2878 251 83 119 chr17 29809179 29809370 -65463281 + MTD-int LTR MaLR 945 1088 -170 1 812 1224 61 0 0 chr17 29809370 29809518 -65463133 - B1_Mus1 SINE Alu 0 148 1 1 812 2878 251 83 119 chr17 29809518 29809684 -65462967 + MTD-int LTR MaLR 1089 1258 0 1 812 1500 224 108 27 chr17 29809690 29810061 -65462590 + MTD LTR MaLR 18 418 -1 1 812 226 246 33 0 chr17 29810342 29810403 -65462248 + CT-rich Low_complexity Low_complexity 3 65 0 1 812 442 305 38 38 chr17 29810507 29810664 -65461987 + RSINE1 SINE B4 3 159 -6 1 812 195 315 61 115 chr17 29810698 29810863 -65461788 - MIRb SINE MIR -3 265 110 1 812 300 154 0 0 chr17 29811397 29811449 -65461202 + T-rich Low_complexity Low_complexity 1 52 0 1 812 1034 86 50 0 chr17 29811451 29811591 -65461060 - B1_Mus2 SINE Alu 0 147 1 1 812 956 130 0 40 chr17 29811592 29811744 -65460907 - B1_Mur4 SINE Alu 0 150 5 1 812 207 328 16 0 chr17 29812985 29813049 -65459602 + MIRm SINE MIR 210 274 -2 1 812 455 213 198 3 chr17 29813346 29813448 -65459203 + MTB_Mm LTR MaLR 12 195 -212 1 812 827 96 58 22 chr17 29813448 29813586 -65459065 + B1_Mus1 SINE Alu 5 147 -1 1 812 455 254 56 16 chr17 29813586 29813737 -65458914 + MTB_Mm LTR MaLR 196 413 -8 1 812 268 250 250 59 chr17 29816866 29817002 -65455649 + RSINE1 SINE B4 4 165 0 1 812 261 83 0 0 chr17 29817655 29817691 -65454960 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 1 812 209 33 33 0 chr17 29818249 29818279 -65454372 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 812 398 305 55 94 chr17 29818279 29818379 -65454272 - B4 SINE B4 0 292 70 1 812 906 141 14 0 chr17 29818354 29818496 -65454155 - B1_Mus2 SINE Alu -2 145 2 1 812 447 202 30 98 chr17 29818379 29818511 -65454140 - MT2B LTR ERVL -323 278 156 1 812 372 260 19 48 chr17 29818682 29818787 -65453864 - MIRm SINE MIR -126 150 49 1 812 180 333 105 57 chr17 29820683 29820807 -65451844 - MIRb SINE MIR -73 195 66 1 812 415 286 10 39 chr17 29820857 29820959 -65451692 - PB1D7 SINE Alu -15 105 7 1 812 243 272 112 71 chr17 29821597 29821658 -65450993 + MT2B LTR ERVL 88 155 -446 1 812 699 125 90 38 chr17 29821658 29821791 -65450860 + B1_Mur3 SINE Alu 1 140 -9 1 812 548 179 88 18 chr17 29823506 29823620 -65449031 - B1_Mur1 SINE Alu -1 148 27 1 812 416 289 82 8 chr17 29823644 29823766 -65448885 - B1F SINE Alu -18 131 1 1 812 447 19 0 0 chr17 29824573 29824625 -65448026 + (CAG)n Simple_repeat Simple_repeat 2 53 0 1 812 691 224 14 7 chr17 29825236 29825380 -65447271 - ID_B1 SINE B4 -2 222 78 1 812 4326 101 13 24 chr17 29825866 29826516 -65446135 - RLTR5_Mm LTR ERV1 -7 621 1 1 812 657 227 22 29 chr17 29827873 29828009 -65444642 - B1_Mur1 SINE Alu -5 144 10 1 812 295 311 0 26 chr17 29828700 29828776 -65443875 - B3A SINE B2 -78 120 47 1 812 533 179 205 0 chr17 29828820 29828932 -65443719 - B1_Mur3 SINE Alu -13 136 2 1 812 1363 89 5 5 chr17 29829030 29829043 -65443608 - B2_Mm2 SINE B2 -2 193 181 1 812 1157 55 14 14 chr17 29829043 29829190 -65443461 - B1_Mus1 SINE Alu 0 148 2 1 812 1363 89 5 5 chr17 29829190 29829207 -65443444 - B2_Mm2 SINE B2 -15 180 163 1 812 486 0 0 0 chr17 29829207 29829261 -65443390 + (TTTA)n Simple_repeat Simple_repeat 1 54 0 1 812 1363 89 5 5 chr17 29829261 29829421 -65443230 - B2_Mm2 SINE B2 -33 162 3 1 812 487 300 309 13 chr17 29829442 29829814 -65442837 - L1MEf LINE L1 -811 5335 4854 1 812 226 125 50 0 chr17 29829849 29829889 -65442762 - L1M2 LINE L1 -1301 4842 4801 1 812 261 237 31 53 chr17 29830033 29830123 -65442528 - PB1D10 SINE Alu -32 117 23 1 812 249 327 9 9 chr17 29830133 29830244 -65442407 - L1MEf LINE L1 -4529 1713 1603 1 812 304 280 90 0 chr17 29830288 29830388 -65442263 + PB1D9 SINE Alu 6 114 -6 1 812 369 268 37 82 chr17 29830553 29830687 -65441964 - B3A SINE B2 0 198 71 1 812 571 296 50 25 chr17 29830776 29830977 -65441674 - B4A SINE B4 -22 270 65 1 812 231 167 0 0 chr17 29831277 29831319 -65441332 + CT-rich Low_complexity Low_complexity 4 45 0 1 812 564 142 45 36 chr17 29831324 29831434 -65441217 - PB1D9 SINE Alu -7 113 3 1 812 993 188 36 5 chr17 29832154 29832347 -65440304 + B3 SINE B2 8 206 -10 1 812 1311 27 0 0 chr17 29832954 29833101 -65439550 - B1_Mus2 SINE Alu 0 147 1 1 812 321 263 0 0 chr17 29849435 29849511 -65423140 + ID4_ SINE ID 3 78 -5 1 812 276 185 62 0 chr17 29850212 29850277 -65422374 + ID4_ SINE ID 4 72 -11 1 812 1024 208 40 40 chr17 29850277 29850552 -65422099 - MTD-int LTR MaLR -978 280 6 1 812 1240 213 118 49 chr17 29850558 29850635 -65422016 - MTD LTR MaLR -1 418 341 1 812 1506 55 0 6 chr17 29850635 29850818 -65421833 - B2_Mm2 SINE B2 -12 183 2 1 812 1240 213 118 49 chr17 29850818 29850954 -65421697 - MTD LTR MaLR -79 340 177 1 812 213 65 0 0 chr17 29850954 29850985 -65421666 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1 812 1176 44 0 0 chr17 29850988 29851123 -65421528 - B1_Mus2 SINE Alu -12 135 1 1 812 1240 213 118 49 chr17 29851123 29851294 -65421357 - MTD LTR MaLR -243 176 2 1 812 347 235 0 0 chr17 29851386 29851454 -65421197 + ID4 SINE ID 4 71 -12 1 812 201 74 0 0 chr17 29851462 29851489 -65421162 + (TAGA)n Simple_repeat Simple_repeat 2 28 0 1 812 241 262 33 0 chr17 29852001 29852062 -65420589 - PB1D10 SINE Alu -21 96 34 1 812 270 232 77 48 chr17 29852165 29852269 -65420382 - PB1D10 SINE Alu -1 116 10 1 812 325 198 31 0 chr17 29852289 29852392 -65420259 - B3 SINE B2 -19 197 1 1 812 770 275 124 47 chr17 29852392 29852740 -65419911 + MER82 DNA MER2_type 22 397 -256 1 812 1155 52 0 0 chr17 29852740 29852874 -65419777 + B1_Mus2 SINE Alu 1 134 -13 1 812 210 37 0 0 chr17 29852875 29852902 -65419749 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 812 237 249 733 0 chr17 29852950 29853062 -65419589 + RMER30 DNA MER1_type 7 200 -2 1 812 2478 50 0 3 chr17 29854647 29854950 -65417701 - L1_Mus1 LINE L1 0 6567 6266 1 812 300 333 38 9 chr17 29855026 29855132 -65417519 + PB1 SINE Alu 1 109 -18 1 812 252 0 0 0 chr17 29855133 29855161 -65417490 + (TAA)n Simple_repeat Simple_repeat 1 28 0 1 812 204 260 0 0 chr17 29855550 29855600 -65417051 - MIR3 SINE MIR -2 206 157 1 812 322 241 23 35 chr17 29856052 29856138 -65416513 + B3 SINE B2 1 85 -131 1 812 270 0 0 0 chr17 29856158 29856188 -65416463 + (T)n Simple_repeat Simple_repeat 1 30 0 1 812 1234 35 21 0 chr17 29856190 29856334 -65416317 - B1_Mus2 SINE Alu 0 147 1 1 812 275 312 36 25 chr17 29856335 29856454 -65416197 + B3 SINE B2 77 198 0 1 812 1039 128 0 0 chr17 29856474 29856622 -65416029 + B1_Mus1 SINE Alu 1 148 0 1 812 214 284 112 3 chr17 29856721 29856834 -65415817 + MIR SINE MIR 33 160 -108 1 812 324 70 0 0 chr17 29858288 29858331 -65414320 + (T)n Simple_repeat Simple_repeat 1 43 0 1 812 708 215 65 39 chr17 29858574 29858729 -65413922 - ID_B1 SINE B4 -39 185 27 1 812 232 305 57 88 chr17 29858600 29858690 -65413961 - MT2B LTR ERVL -364 237 127 1 812 245 182 45 0 chr17 29858690 29858734 -65413917 - ID2 SINE ID -19 64 19 1 812 232 305 57 88 chr17 29858734 29858794 -65413857 - MT2B LTR ERVL -364 126 50 1 812 1220 185 0 0 chr17 29858933 29859144 -65413507 - B3 SINE B2 -3 213 3 1 812 629 281 39 0 chr17 29859516 29859669 -65412982 - RSINE1 SINE B4 -5 160 2 1 812 246 208 0 0 chr17 29859678 29859731 -65412920 + CT-rich Low_complexity Low_complexity 2 54 0 1 812 180 0 0 0 chr17 29859752 29859772 -65412879 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 1 812 1482 54 48 0 chr17 29859775 29859961 -65412690 - B2_Mm2 SINE B2 0 195 1 1 812 1012 209 39 5 chr17 29859983 29860190 -65412461 - B3 SINE B2 -1 215 2 1 812 699 12 0 0 chr17 29860264 29860344 -65412307 + (TTCC)n Simple_repeat Simple_repeat 1 80 0 1 812 549 218 254 0 chr17 29860372 29860514 -65412137 + B3A SINE B2 2 179 -19 1 812 423 271 25 74 chr17 29860720 29860883 -65411768 + MIR SINE MIR 61 215 -47 1 812 426 325 8 0 chr17 29860911 29861028 -65411623 - PB1D7 SINE Alu -1 119 2 1 812 22 0 0 0 chr17 29861127 29861149 -65411502 + AT_rich Low_complexity Low_complexity 1 22 0 1 812 1085 101 0 20 chr17 29861149 29861300 -65411351 + B1_Mus1 SINE Alu 1 148 0 1 812 182 292 0 0 chr17 29861921 29861969 -65410682 - L2b LINE L2 0 3375 3328 1 812 376 279 26 43 chr17 29862402 29862518 -65410133 - B3A SINE B2 -83 115 2 1 812 378 0 0 0 chr17 29862522 29862564 -65410087 + (TCTA)n Simple_repeat Simple_repeat 2 43 0 1 812 1067 131 0 0 chr17 29862579 29862724 -65409927 - B1_Mus1 SINE Alu -1 147 3 1 812 516 214 39 0 chr17 29862736 29862839 -65409812 - PB1D10 SINE Alu -7 110 4 1 812 486 305 21 7 chr17 29862876 29863018 -65409633 + RSINE1 SINE B4 6 149 -16 1 812 378 0 0 0 chr17 29863024 29863066 -65409585 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 812 223 229 13 103 chr17 29863913 29863991 -65408660 - L2b LINE L2 -24 3351 3281 1 812 421 262 116 7 chr17 29864113 29864259 -65408392 + L1M5 LINE L1 5447 5608 -632 1 812 352 111 0 0 chr17 29864354 29864408 -65408243 + B4 SINE B4 121 174 -118 1 812 963 99 73 0 chr17 29864419 29864570 -65408081 + B2_Mm2 SINE B2 1 162 -33 1 812 255 61 0 0 chr17 29864570 29864603 -65408048 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 1 812 243 0 0 0 chr17 29864605 29864632 -65408019 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 812 1209 36 0 0 chr17 29864632 29864770 -65407881 - B1_Mm SINE Alu -8 139 2 1 812 279 0 0 0 chr17 29864808 29864839 -65407812 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 812 925 191 290 0 chr17 29865332 29865615 -65407036 + ORR1D2 LTR MaLR 2 366 -4 1 812 1196 49 0 20 chr17 29865620 29865767 -65406884 + B1_Mus1 SINE Alu 5 148 0 1 812 335 286 2 11 chr17 29865950 29866065 -65406586 + PB1D9 SINE Alu 5 119 -1 1 812 1098 85 0 38 chr17 29866071 29866255 -65406396 + (GAAAA)n Simple_repeat Simple_repeat 2 178 0 1 812 548 275 102 44 chr17 29866292 29866566 -65406085 + B4A SINE B4 2 291 -1 1 812 758 283 0 11 chr17 29866628 29866810 -65405841 + B3A SINE B2 3 182 -16 1 812 1387 75 43 5 chr17 29866843 29867030 -65405621 - B2_Mm2 SINE B2 0 195 2 1 812 750 261 4 97 chr17 29867035 29867273 -65405378 - B3A SINE B2 0 216 1 1 812 180 158 0 0 chr17 29868419 29868457 -65404194 + C-rich Low_complexity Low_complexity 1 38 0 1 812 227 380 50 0 chr17 29869192 29869292 -65403359 + MIR SINE MIR 18 122 -140 1 812 238 161 52 35 chr17 29869821 29869843 -65402808 - B1_Mur1 SINE Alu -36 113 90 1 812 180 0 0 0 chr17 29869843 29869863 -65402788 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 812 238 161 52 35 chr17 29869863 29869898 -65402753 - B1_Mur1 SINE Alu -60 89 56 1 812 359 311 17 34 chr17 29870130 29870284 -65402367 - MLT1J LTR MaLR -347 165 29 1 812 877 169 0 0 chr17 29870549 29870614 -65402037 - B1_Mur1 SINE Alu 0 149 85 1 812 2228 84 8 113 chr17 29870614 29870978 -65401673 + ORR1A2 LTR MaLR 1 326 -1 1 812 877 169 0 0 chr17 29870978 29871060 -65401591 - B1_Mur1 SINE Alu -65 84 3 1 812 315 97 310 26 chr17 29871204 29871320 -65401331 - B2_Mm2 SINE B2 0 195 47 1 812 1297 91 17 0 chr17 29871440 29871615 -65401036 - B2_Mm1t SINE B2 -14 179 2 1 812 23 33 0 0 chr17 29872203 29872233 -65400418 + AT_rich Low_complexity Low_complexity 1 30 0 1 812 635 282 0 0 chr17 29872237 29872379 -65400272 - RSINE1 SINE B4 -9 156 15 1 812 363 176 0 39 chr17 29872494 29872571 -65400080 - HAL1-3A_ME LINE L1 -809 2049 1976 1 812 659 148 38 16 chr17 29872571 29872941 -65399710 + (TG)n Simple_repeat Simple_repeat 1 377 0 1 812 1197 55 7 0 chr17 29873988 29874134 -65398517 + B1_Mus2 SINE Alu 1 147 0 1 812 213 121 0 0 chr17 29874134 29874167 -65398484 + (A)n Simple_repeat Simple_repeat 1 33 0 1 812 349 301 0 74 chr17 29874273 29874395 -65398256 - PB1D9 SINE Alu 0 120 8 1 812 671 171 8 0 chr17 29874411 29874534 -65398117 - ID_B1 SINE B4 -19 205 82 1 812 213 103 0 65 chr17 29874812 29874874 -65397777 + G-rich Low_complexity Low_complexity 5 62 0 1 812 306 73 0 0 chr17 29875161 29875202 -65397449 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 812 405 0 0 0 chr17 29875327 29875372 -65397279 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 812 210 273 0 0 chr17 29875893 29875937 -65396714 + MIR SINE MIR 32 75 -187 1 812 460 100 25 0 chr17 29876105 29876185 -65396466 + (TCCA)n Simple_repeat Simple_repeat 3 84 0 1 812 457 188 21 21 chr17 29876252 29876393 -65396258 + (TCCA)n Simple_repeat Simple_repeat 4 144 0 1 812 492 62 0 0 chr17 29876883 29876947 -65395704 + (TCC)n Simple_repeat Simple_repeat 1 64 0 1 812 982 292 97 15 chr17 29876962 29877149 -65395502 - BGLII_B LTR ERVK 0 422 203 1 812 6059 103 17 13 chr17 29877149 29878048 -65394603 - RMER17A2 LTR ERVK -4 902 1 1 812 982 182 42 29 chr17 29878048 29878243 -65394408 - BGLII_B LTR ERVK -239 202 1 1 812 961 184 7 0 chr17 29878631 29878783 -65393868 - RSINE1 SINE B4 -11 154 2 1 812 234 329 12 12 chr17 29880391 29880474 -65392177 + ID2 SINE ID 1 83 0 1 812 684 0 0 0 chr17 29881468 29881544 -65391107 + (GA)n Simple_repeat Simple_repeat 2 77 0 1 812 326 295 42 0 chr17 29881700 29881795 -65390856 + MER81 DNA AcHobo 13 111 -3 1 812 225 348 22 79 chr17 29881920 29882098 -65390553 - Lx8 LINE L1 -1 7472 7305 1 812 332 200 93 19 chr17 29882172 29882279 -65390372 - Lx8 LINE L1 -428 7045 6931 1 812 262 267 26 26 chr17 29882730 29882807 -65389844 - L1MC4a LINE L1 -1958 5924 5848 1 812 209 33 0 32 chr17 29883414 29883445 -65389206 + (TGGGGG)n Simple_repeat Simple_repeat 5 34 0 1 813 1242 48 0 0 chr17 29884738 29884885 -65387766 + B1_Mus1 SINE Alu 2 148 0 1 813 546 91 0 0 chr17 29885072 29885149 -65387502 + (TTTC)n Simple_repeat Simple_repeat 4 80 0 1 813 825 11 0 0 chr17 29885149 29885243 -65387408 + (TTTCC)n Simple_repeat Simple_repeat 3 96 0 1 813 750 105 47 24 chr17 29885258 29885385 -65387266 - B1_Mur4 SINE Alu 0 150 21 1 813 371 21 21 0 chr17 29886013 29886061 -65386590 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 813 380 71 18 0 chr17 29886277 29886333 -65386318 + (GGA)n Simple_repeat Simple_repeat 3 59 0 1 813 372 94 0 0 chr17 29886533 29886586 -65386065 + (TCC)n Simple_repeat Simple_repeat 3 55 0 1 813 1216 54 7 0 chr17 29886587 29886734 -65385917 - B1_Mus1 SINE Alu 0 148 1 1 813 384 22 0 0 chr17 29888158 29888203 -65384448 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 813 435 234 19 9 chr17 29888751 29888892 -65383759 + MIR SINE MIR 17 159 -103 1 813 462 286 148 65 chr17 29888924 29889185 -65383466 + B4 SINE B4 29 292 0 1 813 372 94 0 0 chr17 29889453 29889506 -65383145 + (T)n Simple_repeat Simple_repeat 1 53 0 1 813 1095 82 0 0 chr17 29889506 29889653 -65382998 - B1_Mus2 SINE Alu 0 147 1 1 813 183 345 67 8 chr17 29889685 29889805 -65382846 - MIR3 SINE MIR 0 208 82 1 813 197 300 9 0 chr17 29889867 29889977 -65382674 + (TATG)n Simple_repeat Simple_repeat 4 114 0 1 813 282 299 0 0 chr17 29890036 29890153 -65382498 + (TATATG)n Simple_repeat Simple_repeat 6 122 0 1 813 225 317 86 24 chr17 29890185 29890395 -65382256 + RLTR21 LTR ERVK 1084 1306 -266 1 813 639 227 168 57 chr17 29890438 29890700 -65381951 - B4A SINE B4 0 292 2 1 813 184 77 0 0 chr17 29891407 29891433 -65381218 - MIR SINE MIR -68 140 115 1 813 227 310 97 5 chr17 29892550 29892685 -65379966 - MIR SINE MIR -26 242 88 1 813 2376 236 45 17 chr17 29893495 29894076 -65378575 + RCHARR1 DNA MER1_type 96 692 -282 1 813 1480 238 78 8 chr17 29894106 29894479 -65378172 + MTD LTR MaLR 18 416 -3 1 813 939 221 9 0 chr17 29894485 29894702 -65377949 + RCHARR1 DNA MER1_type 713 931 -43 1 813 1577 42 0 0 chr17 29894704 29894897 -65377754 - B2_Mm1a SINE B2 0 193 1 1 813 545 312 14 87 chr17 29894991 29895279 -65377372 - B4A SINE B4 0 292 26 1 813 520 214 5 9 chr17 29895835 29895967 -65376684 - PB1D10 SINE Alu -2 147 14 1 813 1080 198 9 0 chr17 29896399 29896616 -65376035 + ID_B1 SINE B4 2 220 -4 1 813 378 0 0 0 chr17 29896642 29896684 -65375967 + (CCAA)n Simple_repeat Simple_repeat 2 43 0 1 813 1195 48 0 0 chr17 29897313 29897459 -65375192 + B1_Mus2 SINE Alu 2 147 0 1 813 219 163 0 23 chr17 29897589 29897633 -65375018 + (GGCTG)n Simple_repeat Simple_repeat 4 46 0 1 813 267 204 125 58 chr17 29897961 29898065 -65374586 + MER53 DNA hAT 79 189 -4 1 813 315 0 0 0 chr17 29898109 29898144 -65374507 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 813 763 233 73 62 chr17 29898317 29898332 -65374319 - B4A SINE B4 0 292 278 1 813 495 0 0 0 chr17 29898332 29898387 -65374264 + (GA)n Simple_repeat Simple_repeat 1 55 0 1 813 763 233 73 62 chr17 29898387 29898659 -65373992 - B4A SINE B4 -15 277 2 1 813 657 281 0 0 chr17 29899230 29899383 -65373268 + RSINE1 SINE B4 13 165 0 1 813 730 240 55 45 chr17 29899613 29899814 -65372837 - B3 SINE B2 -8 208 6 1 813 621 244 11 57 chr17 29899791 29899994 -65372657 - ID_B1 SINE B4 -33 259 71 1 813 216 0 0 0 chr17 29900596 29900620 -65372031 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 813 772 102 7 92 chr17 29900693 29900834 -65371817 - URR1B DNA MER1_type -4 221 93 1 813 1206 95 6 0 chr17 29900834 29901003 -65371648 + B2_Mm1t SINE B2 2 171 -22 1 813 420 87 343 19 chr17 29901058 29901163 -65371488 + B2_Mm2 SINE B2 50 188 -7 1 813 258 163 20 0 chr17 29901162 29901211 -65371440 - URR1B DNA MER1_type -118 107 58 1 813 297 0 0 0 chr17 29901719 29901752 -65370899 + (GGA)n Simple_repeat Simple_repeat 3 35 0 1 813 305 283 81 132 chr17 29903098 29903408 -65369243 - ORR1E LTR MaLR 0 359 66 1 813 253 310 40 10 chr17 29904304 29904405 -65368246 - RMER15 LTR ERVL -68 507 404 1 813 510 220 102 0 chr17 29904910 29905028 -65367623 + RSINE1 SINE B4 3 132 -33 1 813 1321 89 5 0 chr17 29905070 29905260 -65367391 - B2_Mm1t SINE B2 0 193 3 1 813 431 273 215 19 chr17 29905303 29905512 -65367139 - B4A SINE B4 -42 250 1 1 813 243 173 0 0 chr17 29905987 29906039 -65366612 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 813 206 216 0 0 chr17 29906058 29906095 -65366556 + (CATG)n Simple_repeat Simple_repeat 2 38 0 1 813 311 300 184 42 chr17 29906115 29906473 -65366178 + MLT1I LTR MaLR 3 411 0 1 813 339 195 24 94 chr17 29906593 29906678 -65365973 - RSINE1 SINE B4 -60 105 27 1 813 226 352 13 47 chr17 29907168 29907317 -65365334 + YREP_Mm Unknown Unknown 153 296 -1516 1 813 779 241 47 10 chr17 29907204 29907397 -65365254 - ID_B1 SINE B4 -10 214 15 1 813 580 240 8 8 chr17 29907594 29907720 -65364931 + RSINE1 SINE B4 2 127 -38 1 813 243 0 0 0 chr17 29907733 29907760 -65364891 + (CAGG)n Simple_repeat Simple_repeat 4 30 0 1 813 369 0 0 0 chr17 29907775 29907816 -65364835 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 813 189 0 0 0 chr17 29908411 29908432 -65364219 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1 813 1000 65 7 0 chr17 29908436 29908574 -65364077 - B1_Mus1 SINE Alu -5 143 5 1 813 1246 87 54 0 chr17 29908606 29908791 -65363860 - B2_Mm2 SINE B2 0 195 1 1 813 779 152 0 7 chr17 29909342 29909488 -65363163 + CT-rich Low_complexity Low_complexity 1 145 0 1 813 322 200 0 0 chr17 29909488 29909548 -65363103 - PB1D9 SINE Alu -6 114 55 1 813 206 128 26 0 chr17 29910885 29910924 -65361727 + CT-rich Low_complexity Low_complexity 2 41 0 1 813 2136 90 22 0 chr17 29911413 29911725 -65360926 + ORR1A2 LTR MaLR 1 319 -8 1 813 309 68 0 0 chr17 29912920 29912964 -65359687 + (CGTG)n Simple_repeat Simple_repeat 4 47 0 1 813 375 197 0 0 chr17 29912966 29913037 -65359614 - B3A SINE B2 -57 141 71 1 813 953 105 42 0 chr17 29913053 29913196 -65359455 + B2_Mm2 SINE B2 13 161 -34 1 813 216 0 0 0 chr17 29913196 29913220 -65359431 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 1 813 807 137 121 24 chr17 29913220 29913241 -65359410 + B2_Mm1t SINE B2 176 192 -1 1 813 182 286 0 0 chr17 29913803 29913852 -65358799 - MIRb SINE MIR -17 251 203 1 813 762 179 14 14 chr17 29913931 29914078 -65358573 - B1_Mur2 SINE Alu -1 148 2 1 813 387 0 0 0 chr17 29914152 29914195 -65358456 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 813 956 66 65 14 chr17 29914537 29914676 -65357975 + B1_Mm SINE Alu 2 147 0 1 813 364 200 14 0 chr17 29914684 29914754 -65357897 + ID_B1 SINE B4 151 221 -3 1 813 340 165 351 18 chr17 29915580 29915691 -65356960 + B3A SINE B2 1 148 -50 1 813 360 0 0 0 chr17 29915691 29915731 -65356920 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 813 22 0 0 0 chr17 29916195 29916217 -65356434 + GC_rich Low_complexity Low_complexity 1 22 0 1 813 511 349 68 29 chr17 29916429 29916780 -65355871 - MLT1A0 LTR MaLR 0 365 1 1 813 281 352 127 23 chr17 29917284 29917505 -65355146 + MLT1L LTR MaLR 179 422 -188 1 813 289 216 110 33 chr17 29917859 29917943 -65354708 + PB1D10 SINE Alu 9 99 -18 1 813 1182 231 33 52 chr17 29917943 29918272 -65354379 - MT2B LTR ERVL 0 601 279 1 813 1179 48 0 0 chr17 29918318 29918464 -65354187 + B1_Mm SINE Alu 2 147 0 1 813 293 200 0 18 chr17 29918499 29918555 -65354096 - MT2B LTR ERVL -472 112 58 1 813 363 148 0 235 chr17 29918590 29918705 -65353946 - MT2B LTR ERVL -445 88 1 1 813 1220 62 9 119 chr17 29918729 29918948 -65353703 + B2_Mm2 SINE B2 1 195 0 1 813 675 117 0 0 chr17 29918950 29919053 -65353598 + (GAAA)n Simple_repeat Simple_repeat 1 103 0 1 813 289 239 56 71 chr17 29919062 29919188 -65353463 + RSINE1 SINE B4 3 126 -39 1 813 293 270 115 14 chr17 29919442 29919581 -65353070 + RMER15 LTR ERVL 416 568 -7 1 813 230 81 27 0 chr17 29919648 29919685 -65352966 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 1 813 338 246 1 24 chr17 29919852 29919947 -65352704 + RSINE1 SINE B4 2 95 -197 1 813 271 261 50 50 chr17 29919984 29920182 -65352469 + L1MEg LINE L1 642 839 -5245 1 813 491 267 95 25 chr17 29920184 29920384 -65352267 + ID_B1 SINE B4 2 215 -9 1 813 448 263 72 14 chr17 29920574 29920713 -65351938 + B3A SINE B2 27 173 -25 1 813 605 134 9 0 chr17 29920715 29920827 -65351824 + (CAGA)n Simple_repeat Simple_repeat 2 114 0 1 813 432 0 0 0 chr17 29920916 29920964 -65351687 + (TTTTTG)n Simple_repeat Simple_repeat 6 53 0 1 813 1010 58 73 0 chr17 29920964 29921101 -65351550 - B1_Mus2 SINE Alu 0 147 1 1 813 193 130 18 18 chr17 29921683 29921723 -65350928 + CT-rich Low_complexity Low_complexity 17 56 0 1 813 1157 54 7 0 chr17 29921723 29921870 -65350781 - B1_Mus1 SINE Alu 0 148 1 1 813 193 130 18 18 chr17 29921870 29921884 -65350767 + polypyrimidine Low_complexity Low_complexity 3 16 0 1 813 436 256 161 11 chr17 29921884 29922070 -65350581 - B3 SINE B2 0 216 3 1 813 1260 66 60 0 chr17 29922255 29922437 -65350214 - B2_Mm2 SINE B2 -1 194 2 1 813 549 203 0 0 chr17 29922551 29922728 -65349923 + CT-rich Low_complexity Low_complexity 2 178 0 1 813 961 246 111 11 chr17 29922729 29923008 -65349643 + MTE2b LTR MaLR 73 379 0 1 813 472 276 53 57 chr17 29923094 29923340 -65349311 - L1MB7 LINE L1 -5 6179 5935 1 813 552 254 24 9 chr17 29923585 29923719 -65348932 + MTE2b LTR MaLR 43 179 -242 1 813 1067 97 0 13 chr17 29923720 29923877 -65348774 - B2_Mm2 SINE B2 -35 160 6 1 813 1045 220 28 0 chr17 29923888 29924106 -65348545 + MTE2b LTR MaLR 156 379 0 1 813 419 250 25 67 chr17 29924106 29924225 -65348426 - ID_B1 SINE B4 -14 210 97 1 813 478 267 7 64 chr17 29924779 29924919 -65347732 + ID_B1 SINE B4 90 221 -3 1 813 3923 107 51 0 chr17 29925026 29925597 -65347054 - MT2B LTR ERVL 0 601 2 1 813 401 327 0 0 chr17 29926227 29926328 -65346323 + RSINE1 SINE B4 65 165 0 1 813 466 275 58 7 chr17 29926454 29926593 -65346058 + ID_B1 SINE B4 79 224 0 1 813 600 254 126 5 chr17 29926748 29926938 -65345713 + B3 SINE B2 3 215 -1 1 813 222 150 0 0 chr17 29926943 29926983 -65345668 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 1 813 944 296 146 49 chr17 29927301 29927767 -65344884 + MLT1J LTR MaLR 2 512 0 1 813 757 125 38 40 chr17 29927786 29928218 -65344433 + (CATATA)n Simple_repeat Simple_repeat 1 430 0 1 813 215 125 66 33 chr17 29928233 29928324 -65344327 + (CATATA)n Simple_repeat Simple_repeat 2 95 0 1 813 632 259 21 16 chr17 29928356 29928548 -65344103 - B3A SINE B2 -5 193 1 1 813 2226 86 0 109 chr17 29929487 29929854 -65342797 - ORR1A2 LTR MaLR 0 327 1 1 813 712 297 4 55 chr17 29929878 29930131 -65342520 + B4A SINE B4 1 240 -52 1 813 654 0 0 0 chr17 29930132 29930215 -65342436 + L1Md_T LINE L1 6500 6582 0 1 813 378 0 0 0 chr17 29930277 29930319 -65342332 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 813 228 67 0 0 chr17 29930390 29930420 -65342231 + (CCCCCA)n Simple_repeat Simple_repeat 3 32 0 1 813 972 73 73 0 chr17 29930935 29931072 -65341579 - B1_Mus2 SINE Alu 0 147 1 1 813 257 257 94 9 chr17 29931272 29931378 -65341273 - L1ME1 LINE L1 -28 6151 6037 1 813 285 29 0 0 chr17 29931824 29931858 -65340793 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 813 234 0 0 0 chr17 29932878 29932904 -65339747 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 1 813 200 329 0 27 chr17 29932920 29932995 -65339656 - L2a LINE L2 0 3426 3354 1 813 971 73 0 55 chr17 29934298 29934443 -65338208 + B1_Mus1 SINE Alu 1 137 -11 1 813 306 0 0 0 chr17 29934443 29934477 -65338174 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 813 390 246 0 0 chr17 29934500 29934614 -65338037 + (TG)n Simple_repeat Simple_repeat 2 115 0 1 813 200 316 58 92 chr17 29934639 29934813 -65337838 + L2b LINE L2 2669 2836 -583 1 813 242 306 71 9 chr17 29934863 29934975 -65337676 + L2b LINE L2 2962 3080 -295 1 813 267 228 0 0 chr17 29936070 29936127 -65336524 + ID_B1 SINE B4 168 224 0 1 813 775 204 46 55 chr17 29938569 29938787 -65333864 + ID_B1 SINE B4 1 216 -8 1 813 604 296 18 36 chr17 29938964 29939129 -65333522 + RSINE1 SINE B4 4 165 0 1 813 374 315 0 11 chr17 29939137 29939230 -65333421 + ID_B1 SINE B4 124 215 -9 1 813 35 54 0 0 chr17 29939386 29939442 -65333209 + AT_rich Low_complexity Low_complexity 1 56 0 1 813 841 237 0 57 chr17 29939447 29939657 -65332994 - B3A SINE B2 0 198 1 1 813 1132 220 50 59 chr17 29940033 29940356 -65332295 - MTE2a LTR MaLR -2 377 58 1 813 227 239 14 95 chr17 29941131 29941183 -65331468 + B4A SINE B4 2 47 -245 1 813 3514 42 98 13 chr17 29941183 29941661 -65330990 + MURVY-LTR LTR ERV1 1 519 0 1 813 227 239 14 95 chr17 29941661 29941682 -65330969 + B4A SINE B4 48 69 -223 1 813 432 0 0 0 chr17 29941685 29941733 -65330918 + (TATG)n Simple_repeat Simple_repeat 1 48 0 1 813 5712 138 77 12 chr17 29941937 29942960 -65329691 + RLTR13D3 LTR ERVK 1 1090 -24 1 813 1962 90 26 21 chr17 29943115 29943485 -65329166 + RLTR10A LTR ERVK 1 381 -9 1 813 1681 184 59 0 chr17 29943496 29943817 -65328834 + Lx9 LINE L1 6483 6822 -822 1 813 308 348 43 30 chr17 29943743 29944072 -65328579 - RMER17D LTR ERVK -270 619 287 1 813 225 132 0 0 chr17 29944073 29944111 -65328540 + (GGA)n Simple_repeat Simple_repeat 3 40 0 1 813 517 139 12 0 chr17 29944162 29944248 -65328403 + Lx9 LINE L1 6830 6916 -728 1 813 450 155 113 30 chr17 29944245 29944378 -65328273 + Lx9 LINE L1 7459 7602 -42 1 813 490 211 76 117 chr17 29944453 29944528 -65328123 - B1F SINE Alu -6 143 73 1 813 1470 70 16 0 chr17 29944528 29944715 -65327936 - B2_Mm2 SINE B2 -3 192 3 1 813 490 211 76 117 chr17 29944715 29944784 -65327867 - B1F SINE Alu -77 72 5 1 813 387 300 0 0 chr17 29944818 29944918 -65327733 - PB1D10 SINE Alu -17 100 1 1 813 216 163 0 0 chr17 29945047 29945090 -65327561 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 813 214 250 23 0 chr17 29946196 29946240 -65326411 + ID4_ SINE ID 25 69 -14 1 813 912 296 40 11 chr17 29946410 29946759 -65325892 - L1MD LINE L1 -2274 3872 3514 1 813 1242 77 0 6 chr17 29946819 29946988 -65325663 - B2_Mm2 SINE B2 -25 170 3 1 813 248 0 31 0 chr17 29947078 29947110 -65325541 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 1 813 345 297 53 38 chr17 29947110 29947243 -65325408 - B1_Mur1 SINE Alu -14 135 1 1 813 1793 199 31 3 chr17 29947734 29948092 -65324559 + ORR1D1 LTR MaLR 1 368 -6 1 813 1182 68 0 0 chr17 29948092 29948238 -65324413 + B1_Mm SINE Alu 2 147 0 1 813 237 132 0 0 chr17 29948238 29948276 -65324375 + (A)n Simple_repeat Simple_repeat 1 38 0 1 813 624 14 0 0 chr17 29948427 29948500 -65324151 + (TTC)n Simple_repeat Simple_repeat 3 75 0 1 813 1395 74 6 0 chr17 29948500 29948675 -65323976 - B2_Mm2 SINE B2 -18 177 2 1 813 300 27 0 0 chr17 29948853 29948890 -65323761 + (GGA)n Simple_repeat Simple_repeat 1 37 0 1 813 251 343 56 0 chr17 29948938 29949046 -65323605 + MIRm SINE MIR 34 147 -129 1 813 412 274 224 10 chr17 29950116 29950328 -65322323 + B4 SINE B4 1 255 -37 1 813 618 14 0 0 chr17 29950409 29950480 -65322171 + (GGCTG)n Simple_repeat Simple_repeat 4 74 0 1 813 259 312 25 0 chr17 29950706 29950786 -65321865 + RMER15 LTR ERVL 402 483 -92 1 813 512 230 18 9 chr17 29950842 29950956 -65321695 + B3A SINE B2 33 147 -51 1 813 405 0 0 0 chr17 29950971 29951016 -65321635 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 813 423 243 0 0 chr17 29952209 29952361 -65320290 + CT-rich Low_complexity Low_complexity 2 153 0 1 813 449 208 15 0 chr17 29952369 29952480 -65320171 - B1_Mur4 SINE Alu 0 149 33 1 813 477 248 0 0 chr17 29952496 29952657 -65319994 + CT-rich Low_complexity Low_complexity 2 162 0 1 813 454 205 304 0 chr17 29952657 29952769 -65319882 - B1_Mur3 SINE Alu 0 149 4 1 813 209 312 82 14 chr17 29952775 29952938 -65319713 + MIRc SINE MIR 70 253 -23 1 813 1257 54 0 0 chr17 29952954 29953102 -65319549 + B1_Mus1 SINE Alu 1 148 0 1 813 1625 62 22 0 chr17 29953179 29953404 -65319247 + ORR1A2 LTR MaLR 98 327 0 1 813 673 241 71 15 chr17 29953581 29953649 -65319002 + B3 SINE B2 2 69 -147 1 813 1050 30 121 0 chr17 29953649 29953781 -65318870 + B1_Mus1 SINE Alu 1 148 0 1 813 673 241 71 15 chr17 29953781 29953910 -65318741 + B3 SINE B2 70 210 -6 1 813 621 221 7 7 chr17 29954049 29954186 -65318465 - ORR1E LTR MaLR -215 144 8 1 813 237 295 10 40 chr17 29954341 29954440 -65318211 + MIRb SINE MIR 65 160 -108 1 813 214 192 39 0 chr17 29954971 29955023 -65317628 + G-rich Low_complexity Low_complexity 1 54 0 1 813 716 182 38 0 chr17 29957435 29957567 -65315084 + B1_Mus1 SINE Alu 6 142 -6 1 813 432 295 68 53 chr17 29957698 29957944 -65314707 - RMER15 LTR ERVL -14 561 275 1 813 638 242 32 39 chr17 29959008 29959163 -65313488 + RSINE1 SINE B4 12 165 0 1 813 278 219 9 0 chr17 29959168 29959273 -65313378 + (TTAA)n Simple_repeat Simple_repeat 1 106 0 1 813 1534 54 5 0 chr17 29959700 29959886 -65312765 + B2_Mm1t SINE B2 3 189 -4 1 813 857 261 35 24 chr17 29959895 29960182 -65312469 + B4 SINE B4 2 291 -1 1 813 251 308 19 28 chr17 29960722 29960829 -65311822 - L4 LINE RTE -3 2026 1921 1 813 446 286 199 14 chr17 29961303 29961427 -65311224 + RMER15 LTR ERVL 294 445 -130 1 813 267 103 0 0 chr17 29961427 29961466 -65311185 + (CAGA)n Simple_repeat Simple_repeat 4 42 0 1 813 446 286 199 14 chr17 29961466 29961557 -65311094 + RMER15 LTR ERVL 446 548 -27 1 813 339 302 20 30 chr17 29962255 29962354 -65310297 - MLT1H1 LTR MaLR -167 388 291 1 813 338 318 47 0 chr17 29962440 29962547 -65310104 - MLT1H1 LTR MaLR -433 122 11 1 813 216 172 0 0 chr17 29962718 29962776 -65309875 + (CAGA)n Simple_repeat Simple_repeat 2 59 0 1 813 246 62 0 0 chr17 29962776 29962808 -65309843 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 813 753 12 0 0 chr17 29962808 29962893 -65309758 + (GA)n Simple_repeat Simple_repeat 2 87 0 1 813 608 225 33 0 chr17 29963428 29963548 -65309103 + B3 SINE B2 1 124 -92 1 813 452 262 76 23 chr17 29963596 29963768 -65308883 - B3 SINE B2 -2 214 34 1 813 488 198 96 73 chr17 29963832 29963968 -65308683 - B1F SINE Alu -10 139 1 1 813 357 24 0 0 chr17 29963972 29964014 -65308637 + (TC)n Simple_repeat Simple_repeat 1 42 0 1 813 1226 48 7 0 chr17 29964018 29964165 -65308486 - B1_Mus1 SINE Alu 0 148 1 1 813 302 171 12 34 chr17 29964182 29964248 -65308403 - B2_Mm2 SINE B2 -83 115 46 1 813 1024 154 53 0 chr17 29964313 29964482 -65308169 - B2_Mm1t SINE B2 -14 179 2 1 813 675 81 0 0 chr17 29964755 29964854 -65307797 + (CAGCC)n Simple_repeat Simple_repeat 3 101 0 1 813 290 322 33 0 chr17 29965457 29965547 -65307104 + MIR3 SINE MIR 95 187 -21 1 813 510 17 0 0 chr17 29965583 29965642 -65307009 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 813 303 164 0 0 chr17 29967598 29967659 -65304992 + (ATG)n Simple_repeat Simple_repeat 2 62 0 1 813 311 203 14 0 chr17 29970651 29970725 -65301926 + (TA)n Simple_repeat Simple_repeat 2 76 0 1 813 231 146 0 0 chr17 29970724 29970765 -65301886 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 813 580 291 74 6 chr17 29970765 29970941 -65301710 - B3A SINE B2 -2 196 9 1 813 216 163 0 0 chr17 29970947 29970990 -65301661 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1 813 366 233 43 43 chr17 29971000 29971094 -65301557 - RSINE1 SINE B4 -13 152 59 1 813 396 0 0 0 chr17 29971157 29971201 -65301450 + (TTA)n Simple_repeat Simple_repeat 2 45 0 1 813 572 269 17 46 chr17 29971225 29971400 -65301251 - B4A SINE B4 -122 170 1 1 813 815 264 19 24 chr17 29972278 29972491 -65300160 - B3 SINE B2 0 216 5 1 813 267 139 0 0 chr17 29972494 29972537 -65300114 + B4A SINE B4 178 220 -72 1 813 258 180 60 0 chr17 29972557 29972607 -65300044 - MurSatRep1 Unknown Unknown -1862 275 223 1 813 269 297 0 13 chr17 29972640 29972715 -65299936 + B4A SINE B4 219 292 0 1 813 827 77 0 0 chr17 29972772 29972889 -65299762 + B2_Mm2 SINE B2 1 117 -78 1 813 23 0 0 0 chr17 29972890 29972913 -65299738 + AT_rich Low_complexity Low_complexity 1 23 0 1 813 1190 43 0 0 chr17 29974020 29974158 -65298493 + B1_Mus1 SINE Alu 1 138 -10 1 813 433 44 14 14 chr17 29974158 29974227 -65298424 + (CAAAA)n Simple_repeat Simple_repeat 2 70 0 1 813 811 164 56 14 chr17 29974231 29974373 -65298278 - B1_Mur1 SINE Alu 0 149 2 1 813 1308 274 72 24 chr17 29975731 29976146 -65296505 - Charlie4a DNA MER1_type -52 456 22 1 813 235 262 45 15 chr17 29976195 29976261 -65296390 + MTD LTR MaLR 352 419 0 1 813 220 191 0 0 chr17 29976565 29976607 -65296044 + G-rich Low_complexity Low_complexity 6 47 0 1 813 267 331 40 33 chr17 29977151 29977301 -65295350 - MIRb SINE MIR -19 249 99 1 813 180 152 0 0 chr17 29978066 29978099 -65294552 + G-rich Low_complexity Low_complexity 4 36 0 1 813 318 233 82 0 chr17 29980148 29980221 -65292430 - ID_B1 SINE B4 -32 192 114 1 813 420 245 245 0 chr17 29980266 29980429 -65292222 - B3 SINE B2 -10 206 4 1 813 303 282 35 26 chr17 29980460 29980573 -65292078 + MLT1J LTR MaLR 5 118 -394 1 813 252 273 26 13 chr17 29980791 29980802 -65291849 - ID4 SINE ID 0 83 7 1 813 252 266 0 15 chr17 29980802 29980867 -65291784 - tRNA-Ala-GCY_ tRNA tRNA -10 65 2 1 813 266 386 54 54 chr17 29981082 29981304 -65291347 - ORSL-2a DNA Tip100 -118 224 3 1 813 1222 49 0 0 chr17 29981501 29981645 -65291006 - B1_Mus1 SINE Alu 0 148 5 1 813 236 341 12 0 chr17 29982311 29982393 -65290258 + B3 SINE B2 3 85 -131 1 813 608 225 0 0 chr17 29982332 29982443 -65290208 + RSINE1 SINE B4 26 136 -29 1 813 21 0 0 0 chr17 29982550 29982571 -65290080 + AT_rich Low_complexity Low_complexity 1 21 0 1 813 293 295 42 0 chr17 29982602 29982697 -65289954 + MLT1B LTR MaLR 1 99 -291 1 813 209 276 133 0 chr17 29982861 29982966 -65289685 + L2c LINE L2 2969 3087 -300 1 813 423 0 0 0 chr17 29983076 29983123 -65289528 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 813 180 0 0 0 chr17 29983696 29983716 -65288935 + (CG)n Simple_repeat Simple_repeat 2 21 0 1 813 378 0 0 0 chr17 29983716 29983757 -65288894 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 813 233 153 0 209 chr17 29984791 29984882 -65287769 + RLTR25A LTR ERVK 501 572 -531 1 813 745 113 0 0 chr17 29984814 29984929 -65287722 + B1_Mur4 SINE Alu 34 148 -2 1 813 1047 195 15 0 chr17 29984929 29985124 -65287527 - B3 SINE B2 -16 200 3 1 813 529 256 7 50 chr17 29985152 29985292 -65287359 - ID_B1 SINE B4 0 224 91 1 813 212 115 58 0 chr17 29985336 29985388 -65287263 + A-rich Low_complexity Low_complexity 6 60 0 1 813 774 156 16 0 chr17 29985561 29985689 -65286962 + B1_Mur1 SINE Alu 20 149 0 1 813 248 0 0 30 chr17 29985828 29985861 -65286790 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 1 813 219 58 56 37 chr17 29988042 29988096 -65284555 + T-rich Low_complexity Low_complexity 1 55 0 1 813 988 206 44 10 chr17 29988096 29988302 -65284349 - ID_B1 SINE B4 -1 223 11 1 813 334 324 0 0 chr17 29988406 29988508 -65284143 + RMER30 DNA MER1_type 2 103 -99 1 813 189 0 0 0 chr17 29988508 29988529 -65284122 + (A)n Simple_repeat Simple_repeat 1 21 0 1 813 431 259 43 0 chr17 29988793 29988909 -65283742 + RSINE1 SINE B4 8 128 -37 1 813 380 293 173 0 chr17 29990109 29990360 -65282291 + MLT1F2 LTR MaLR 233 560 0 1 813 471 278 72 22 chr17 29990574 29990754 -65281897 - ID_B1 SINE B4 -31 193 5 1 813 336 325 131 0 chr17 29990757 29990917 -65281734 - L1MEd LINE L1 -5042 1077 897 1 813 447 306 233 0 chr17 29991922 29992102 -65280549 - ID_B1 SINE B4 -1 223 2 1 813 180 364 0 0 chr17 29992367 29992422 -65280229 + L2a LINE L2 3346 3400 -26 1 813 569 263 22 50 chr17 29992977 29993157 -65279494 + ID_B1 SINE B4 36 210 -14 1 813 245 304 16 82 chr17 29993809 29993931 -65278720 + MIRb SINE MIR 41 154 -54 1 813 261 139 0 0 chr17 29994003 29994046 -65278605 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 1 813 1171 68 0 0 chr17 29994047 29994193 -65278458 - B1_Mm SINE Alu 0 147 2 1 813 216 0 0 0 chr17 29995322 29995346 -65277305 + (TTTTTG)n Simple_repeat Simple_repeat 6 29 0 1 813 1228 42 14 0 chr17 29995346 29995490 -65277161 - B1_Mm SINE Alu 0 147 2 1 813 504 0 0 0 chr17 29995731 29995787 -65276864 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 813 414 0 0 0 chr17 29995787 29995832 -65276819 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 813 248 286 0 14 chr17 29996024 29996095 -65276556 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 813 363 237 105 0 chr17 29996600 29996714 -65275937 + MIR3 SINE MIR 81 206 -2 1 813 382 205 39 0 chr17 29997419 29997497 -65275154 + B2_Mm2 SINE B2 1 81 -114 1 813 210 37 0 0 chr17 29997589 29997616 -65275035 + (CAA)n Simple_repeat Simple_repeat 2 28 0 1 813 671 214 13 27 chr17 29997661 29997810 -65274841 + B1_Mur1 SINE Alu 3 149 0 1 813 1507 53 21 0 chr17 29997825 29998014 -65274637 + B2_Mm2 SINE B2 1 193 -2 1 813 329 340 25 25 chr17 29998353 29998513 -65274138 + L1ME2 LINE L1 5877 6036 -128 1 813 251 191 28 56 chr17 29998590 29998662 -65273989 + ORR1E LTR MaLR 1 70 -289 1 813 702 265 96 10 chr17 29998724 29998922 -65273729 + ID_B1 SINE B4 1 215 -9 1 813 290 273 0 25 chr17 29999090 29999169 -65273482 + MTEb LTR MaLR 295 371 -8 1 813 1367 60 22 6 chr17 29999200 29999383 -65273268 + B2_Mm2 SINE B2 2 187 -8 1 813 464 0 0 142 chr17 29999614 29999966 -65272685 + (GAGTG)n Simple_repeat Simple_repeat 1 301 0 1 813 464 0 0 137 chr17 30000007 30000211 -65272440 + (GAGTG)n Simple_repeat Simple_repeat 3 178 0 1 813 277 116 346 19 chr17 30000393 30000497 -65272154 - B2_Mm2 SINE B2 -11 184 47 2 813 1059 153 35 0 chr17 30000509 30000679 -65271972 - B2_Mm1t SINE B2 -15 178 3 3 813 876 120 0 0 chr17 30000679 30000812 -65271839 + B1_Mus2 SINE Alu 13 145 -2 4 813 276 318 78 16 chr17 30001203 30001331 -65271320 + MIRb SINE MIR 1 136 -132 5 813 286 272 84 37 chr17 30001601 30001708 -65270943 + B4A SINE B4 51 162 -130 6 813 231 310 44 25 chr17 30002082 30002241 -65270410 - MIRm SINE MIR -90 178 20 7 813 1290 90 34 6 chr17 30002440 30002619 -65270032 - B2_Mm2 SINE B2 -10 185 2 8 813 338 283 76 65 chr17 30003670 30003758 -65268893 + B4 SINE B4 2 97 -195 9 813 3307 65 2 12 chr17 30003758 30004166 -65268485 + MTB_Mm LTR MaLR 4 407 0 1 813 338 283 76 65 chr17 30004166 30004262 -65268389 + B4 SINE B4 98 188 -104 9 813 348 310 85 61 chr17 30004838 30005003 -65267648 + MIRb SINE MIR 79 247 -21 1 813 306 292 38 83 chr17 30005383 30005540 -65267111 + MIRm SINE MIR 17 166 -110 1 813 619 298 111 92 chr17 30007380 30007750 -65264901 - MTEa LTR MaLR 0 379 3 1 813 916 175 0 7 chr17 30007993 30008148 -65264503 + B3A SINE B2 1 154 -44 1 813 471 130 0 0 chr17 30008148 30008225 -65264426 + (CA)n Simple_repeat Simple_repeat 1 77 0 1 813 1525 74 16 0 chr17 30008249 30008439 -65264212 + B2_Mm2 SINE B2 3 195 0 1 813 267 31 0 0 chr17 30008439 30008471 -65264180 + (GGA)n Simple_repeat Simple_repeat 3 34 0 1 813 274 269 123 35 chr17 30009231 30009380 -65263271 - MIR SINE MIR -108 168 5 1 813 1155 78 0 14 chr17 30009382 30009608 -65263043 + (CA)n Simple_repeat Simple_repeat 1 222 0 1 813 387 0 0 0 chr17 30010194 30010237 -65262414 + (TC)n Simple_repeat Simple_repeat 1 43 0 2 813 875 211 42 19 chr17 30010237 30010441 -65262210 - ID_B1 SINE B4 -12 212 2 2 813 378 61 30 15 chr17 30011525 30011592 -65261059 + (CGGGG)n Simple_repeat Simple_repeat 1 68 0 2 813 1187 156 69 23 chr17 30012338 30012554 -65260097 + URR1A DNA MER1_type 1 226 0 2 813 703 230 72 17 chr17 30014671 30014852 -65257799 + B3A SINE B2 2 192 -6 2 813 764 159 0 42 chr17 30015214 30015358 -65257293 + B1_Mus2 SINE Alu 10 147 0 2 813 234 0 0 0 chr17 30015358 30015384 -65257267 + (A)n Simple_repeat Simple_repeat 1 26 0 2 814 264 360 46 38 chr17 30015699 30015821 -65256830 + MIRc SINE MIR 24 149 -119 2 814 252 0 0 0 chr17 30015842 30015870 -65256781 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 814 283 291 254 0 chr17 30017184 30017322 -65255329 + ID_B1 SINE B4 4 176 -48 2 814 211 247 153 0 chr17 30017255 30017340 -65255311 + PB1 SINE Alu 29 126 -1 3 814 219 308 31 35 chr17 30017914 30018080 -65254571 + L2b LINE L2 2939 3106 -320 3 814 693 126 0 0 chr17 30018632 30018743 -65253908 + (CACCAT)n Simple_repeat Simple_repeat 5 115 0 3 814 207 349 11 11 chr17 30018987 30019074 -65253577 + MIRc SINE MIR 43 129 -139 3 814 1122 75 0 58 chr17 30019280 30019299 -65253352 - B1_Mus1 SINE Alu 0 148 138 3 814 255 41 40 20 chr17 30019299 30019349 -65253302 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 3 814 1122 75 0 58 chr17 30019349 30019485 -65253166 - B1_Mus1 SINE Alu -11 137 2 3 814 417 20 0 0 chr17 30021545 30021595 -65251056 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 814 612 0 0 0 chr17 30021909 30021977 -65250674 + (CAG)n Simple_repeat Simple_repeat 1 68 0 3 814 30 100 0 0 chr17 30025387 30025487 -65247164 + GC_rich Low_complexity Low_complexity 1 100 0 3 814 256 293 8 25 chr17 30025559 30025678 -65246973 + CT-rich Low_complexity Low_complexity 1 117 0 3 814 536 111 0 11 chr17 30025813 30025904 -65246747 + (TC)n Simple_repeat Simple_repeat 1 90 0 4 814 237 330 0 54 chr17 30026925 30027018 -65245633 + L1MC3 LINE L1 6060 6147 -1638 4 814 23 0 0 0 chr17 30027027 30027050 -65245601 + AT_rich Low_complexity Low_complexity 1 23 0 4 814 243 0 0 0 chr17 30027329 30027356 -65245295 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 4 814 202 203 32 63 chr17 30029177 30029240 -65243411 - L2a LINE L2 -39 3387 3327 4 814 435 38 0 0 chr17 30029316 30029369 -65243282 + (CAAAAA)n Simple_repeat Simple_repeat 2 54 0 4 814 199 327 38 19 chr17 30029516 30029622 -65243029 - L2a LINE L2 -290 3136 3029 4 814 566 259 234 27 chr17 30029682 30029904 -65242747 + ORR1D2 LTR MaLR 6 273 -97 4 814 195 42 0 0 chr17 30030024 30030048 -65242603 + (GGGAA)n Simple_repeat Simple_repeat 5 28 0 4 814 287 236 0 0 chr17 30030050 30030105 -65242546 + MIRm SINE MIR 207 261 -15 4 814 1796 156 99 42 chr17 30030219 30030276 -65242375 + MTD LTR MaLR 1 57 -362 5 814 1373 87 16 5 chr17 30030276 30030462 -65242189 - B2_Mm2 SINE B2 -7 188 1 5 814 1796 156 99 42 chr17 30030462 30030786 -65241865 + MTD LTR MaLR 58 404 -15 5 814 181 337 20 20 chr17 30030814 30030914 -65241737 - MIR SINE MIR -46 216 117 5 814 1070 60 8 0 chr17 30031203 30031337 -65241314 + B1_Mus1 SINE Alu 1 135 -13 5 814 243 0 0 0 chr17 30031337 30031364 -65241287 + (CAA)n Simple_repeat Simple_repeat 1 27 0 5 814 235 224 121 0 chr17 30032911 30032969 -65239682 - ID4_ SINE ID -14 69 5 5 814 250 242 16 0 chr17 30032978 30033040 -65239611 - B1F SINE Alu -21 128 66 5 814 234 237 0 48 chr17 30032987 30033049 -65239602 - ID_B1 SINE B4 -27 197 139 5 814 450 0 0 0 chr17 30033126 30033176 -65239475 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 814 493 254 74 68 chr17 30033930 30034120 -65238531 - B3 SINE B2 0 216 26 5 814 901 161 15 7 chr17 30034146 30034419 -65238232 + GA-rich Low_complexity Low_complexity 1 275 0 6 814 779 169 15 4 chr17 30034388 30034649 -65238002 + G-rich Low_complexity Low_complexity 1 264 0 6 814 29 0 0 0 chr17 30034987 30035016 -65237635 + AT_rich Low_complexity Low_complexity 1 29 0 6 814 261 310 51 13 chr17 30035039 30035196 -65237455 + L1ME4a LINE L1 5962 6124 0 6 814 312 288 59 29 chr17 30035365 30035501 -65237150 - MamGypLTR1b LTR Gypsy 0 782 643 6 814 1128 75 0 20 chr17 30036002 30036152 -65236499 + B1_Mus1 SINE Alu 2 148 0 6 814 1382 85 16 5 chr17 30036270 30036459 -65236192 - B2_Mm2 SINE B2 -4 191 1 6 814 25 0 0 0 chr17 30036473 30036498 -65236153 + AT_rich Low_complexity Low_complexity 1 25 0 6 814 2202 87 3 58 chr17 30036515 30036858 -65235793 - ORR1A2 LTR MaLR 0 327 4 6 814 625 269 7 14 chr17 30036896 30037039 -65235612 - RSINE1 SINE B4 -18 147 6 6 814 226 274 0 0 chr17 30037033 30037084 -65235567 - RSINE1 SINE B4 -112 53 3 7 814 207 100 0 0 chr17 30037952 30037982 -65234669 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 7 814 218 279 32 16 chr17 30037985 30038047 -65234604 - L2a LINE L2 -2 3424 3362 7 814 3144 62 46 0 chr17 30038246 30038635 -65234016 - MTB_Mm LTR MaLR 0 407 1 7 814 726 246 88 29 chr17 30040378 30040583 -65232068 + ID_B1 SINE B4 7 223 -1 7 814 310 286 0 0 chr17 30040957 30041034 -65231617 + MIR SINE MIR 81 157 -105 7 814 273 278 30 20 chr17 30041038 30041137 -65231514 - MIR SINE MIR -2 260 161 7 814 390 334 29 2 chr17 30041861 30042020 -65230631 + MIR SINE MIR 34 202 -66 7 814 705 249 87 10 chr17 30042143 30042338 -65230313 - B3 SINE B2 -6 210 1 7 814 192 231 0 0 chr17 30042380 30042432 -65230219 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 814 377 363 38 45 chr17 30042455 30042746 -65229905 - B4A SINE B4 -2 290 2 8 814 687 229 0 0 chr17 30042768 30042899 -65229752 - ID_B1 SINE B4 -10 214 84 8 814 1150 254 7 47 chr17 30043103 30043401 -65229250 + B4A SINE B4 6 291 -1 8 814 255 209 56 34 chr17 30043885 30043974 -65228677 + ORR1E LTR MaLR 1 91 -268 8 814 374 184 24 142 chr17 30043982 30044109 -65228542 + MT2B LTR ERVL 167 278 -323 8 814 663 136 0 0 chr17 30044011 30044114 -65228537 + B1_Mus2 SINE Alu 23 125 -22 8 814 2420 63 83 0 chr17 30044114 30044416 -65228235 + ORR1A2 LTR MaLR 1 327 0 8 814 635 143 17 51 chr17 30044416 30044430 -65228221 + B1_Mur1 SINE Alu 127 136 -13 8 814 276 100 0 0 chr17 30044431 30044471 -65228180 + (TTAA)n Simple_repeat Simple_repeat 2 41 0 8 814 601 274 4 149 chr17 30044471 30044534 -65228117 + MTE-int LTR MaLR 1307 1356 -224 8 814 1028 229 19 19 chr17 30044534 30044748 -65227903 - B3 SINE B2 0 216 3 9 814 601 274 4 149 chr17 30044748 30044929 -65227722 + MTE-int LTR MaLR 1357 1513 -67 8 814 498 317 17 44 chr17 30044929 30045159 -65227492 + ORR1E LTR MaLR 1 220 -150 9 814 1144 231 0 0 chr17 30045411 30045627 -65227024 + B3 SINE B2 1 216 0 9 814 376 294 33 0 chr17 30045661 30045753 -65226898 + PB1D7 SINE Alu 12 106 -14 9 814 387 0 0 0 chr17 30045779 30045822 -65226829 + (TC)n Simple_repeat Simple_repeat 2 44 0 9 814 192 135 0 0 chr17 30045840 30045877 -65226774 + (CA)n Simple_repeat Simple_repeat 1 37 0 9 814 609 151 151 0 chr17 30045932 30046051 -65226600 - B1_Mur2 SINE Alu 0 149 13 9 814 398 264 76 152 chr17 30046049 30046071 -65226580 - B2_Mm2 SINE B2 -13 182 162 9 814 396 97 0 0 chr17 30046071 30046133 -65226518 + (TG)n Simple_repeat Simple_repeat 2 63 0 9 814 543 227 86 138 chr17 30046133 30046307 -65226344 - B3 SINE B2 -51 165 1 9 814 1068 240 156 44 chr17 30046836 30047176 -65225475 - MTEa LTR MaLR -1 378 1 1 814 1680 290 55 50 chr17 30047576 30048161 -65224490 - MER99 DNA hAT? -20 811 224 1 814 727 221 50 0 chr17 30048574 30048714 -65223937 + B1_Mus2 SINE Alu 1 147 0 1 814 228 233 27 27 chr17 30049662 30049737 -65222914 - MLT1H LTR MaLR 0 555 481 1 814 366 329 0 17 chr17 30050042 30050165 -65222486 + B1F SINE Alu 2 116 -1 1 814 436 229 37 19 chr17 30050148 30050255 -65222396 + ID_B1 SINE B4 116 224 0 1 814 289 314 34 16 chr17 30050369 30050532 -65222119 - MLT1H LTR MaLR -342 207 2 1 814 1853 157 14 6 chr17 30050615 30051041 -65221610 + ORR1A3 LTR MaLR 1 394 0 1 814 234 304 29 2 chr17 30051276 30051353 -65221298 - MIRb SINE MIR -5 257 180 1 814 195 125 0 0 chr17 30051353 30051393 -65221258 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 1 814 1290 34 0 0 chr17 30051393 30051540 -65221111 - B1_Mus2 SINE Alu 0 147 1 1 814 1064 144 5 26 chr17 30051542 30051734 -65220917 - URR1A DNA MER1_type -37 189 2 1 814 251 259 0 0 chr17 30051823 30051877 -65220774 - ID SINE ID -162 62 9 1 814 635 225 22 7 chr17 30051939 30052074 -65220577 + ID_B1 SINE B4 77 209 -15 1 814 2490 71 6 44 chr17 30052095 30052435 -65220216 - ORR1A2 LTR MaLR 0 327 1 1 814 1192 251 78 15 chr17 30053662 30053997 -65218654 - ORR1E LTR MaLR 0 359 4 1 814 1117 159 18 76 chr17 30054293 30054517 -65218134 - B3 SINE B2 -4 212 2 1 814 198 0 0 0 chr17 30054605 30054627 -65218024 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 1 814 1295 204 58 10 chr17 30054641 30054934 -65217717 + RMER4B LTR ERVK 33 339 -246 1 814 546 143 0 0 chr17 30054934 30055025 -65217626 + (GGA)n Simple_repeat Simple_repeat 2 92 0 1 814 1524 157 19 11 chr17 30055025 30055290 -65217361 + RMER4B LTR ERVK 319 585 0 1 814 317 253 0 133 chr17 30055290 30055364 -65217287 - B1F1 SINE Alu -79 70 11 1 814 378 0 0 0 chr17 30055421 30055463 -65217188 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 814 337 256 191 15 chr17 30055672 30055803 -65216848 - ID_B1 SINE B4 -4 220 67 1 814 342 0 0 0 chr17 30057005 30057043 -65215608 + (TCTG)n Simple_repeat Simple_repeat 2 39 0 1 814 584 27 14 0 chr17 30057338 30057412 -65215239 + (TC)n Simple_repeat Simple_repeat 1 75 0 1 814 373 305 62 0 chr17 30057433 30057561 -65215090 - B1F SINE Alu -13 136 1 1 814 270 0 0 0 chr17 30057892 30057922 -65214729 + (CCCCCT)n Simple_repeat Simple_repeat 6 35 0 1 814 230 232 17 35 chr17 30058572 30058630 -65214021 - MTEb LTR MaLR -3 376 320 1 814 218 226 19 0 chr17 30058654 30058707 -65213944 + (CATA)n Simple_repeat Simple_repeat 3 56 0 1 814 839 161 7 10 chr17 30058769 30059054 -65213597 + CT-rich Low_complexity Low_complexity 1 284 0 1 814 784 95 0 0 chr17 30059100 30059205 -65213446 + B2_Mm2 SINE B2 3 107 -88 1 814 569 293 110 0 chr17 30059434 30059598 -65213053 + B3A SINE B2 1 182 -16 1 814 631 232 77 59 chr17 30059628 30059848 -65212803 + MER44A DNA MER2_type 89 312 -27 1 814 659 294 0 0 chr17 30059850 30060010 -65212641 + RSINE1 SINE B4 3 162 -3 1 814 724 239 0 0 chr17 30060040 30060178 -65212473 + ID_B1 SINE B4 78 215 -9 1 814 219 125 75 0 chr17 30060143 30060183 -65212468 + PB1D9 SINE Alu 74 116 -4 1 814 1157 55 20 7 chr17 30060273 30060419 -65212232 + B1_Mus1 SINE Alu 1 148 0 1 814 497 204 189 7 chr17 30060486 30060629 -65212022 + ID_B1 SINE B4 35 203 -21 1 814 306 0 0 0 chr17 30060629 30060663 -65211988 + (TC)n Simple_repeat Simple_repeat 1 34 0 1 814 333 0 0 0 chr17 30060663 30060699 -65211952 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 814 777 226 0 27 chr17 30060738 30060888 -65211763 + B1F SINE Alu 1 146 -3 1 814 499 235 0 19 chr17 30061049 30061153 -65211498 - PB1D9 SINE Alu 0 120 19 1 814 308 349 114 0 chr17 30061305 30061437 -65211214 + MLT1J LTR MaLR 158 304 -208 1 814 342 0 0 0 chr17 30061560 30061598 -65211053 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1 814 306 65 22 0 chr17 30061600 30061646 -65211005 - B1_Mm SINE Alu -6 141 95 1 814 700 199 14 41 chr17 30062370 30062517 -65210134 + ID_B1 SINE B4 81 223 -1 1 814 231 270 131 80 chr17 30062396 30062533 -65210118 - YREP_Mm Unknown Unknown -1518 294 151 1 814 201 74 0 0 chr17 30063257 30063284 -65209367 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 1 814 249 265 211 46 chr17 30063840 30064034 -65208617 + RMER15 LTR ERVL 336 561 -14 1 814 362 269 65 32 chr17 30064183 30064306 -65208345 + MER70A LTR ERVL 1 127 -451 1 814 420 225 17 67 chr17 30064667 30064786 -65207865 + MER70A LTR ERVL 322 434 -38 1 814 187 262 15 76 chr17 30064932 30064998 -65207653 - MIR SINE MIR -68 194 133 1 814 292 269 0 71 chr17 30065295 30065379 -65207272 + ID4_ SINE ID 4 81 -2 1 814 944 159 14 0 chr17 30065383 30065528 -65207123 + B1_Mus2 SINE Alu 1 147 0 1 814 766 193 6 6 chr17 30067187 30067364 -65205287 + CT-rich Low_complexity Low_complexity 2 178 0 1 814 188 312 0 8 chr17 30067387 30067516 -65205135 + CT-rich Low_complexity Low_complexity 2 129 0 1 814 312 282 137 53 chr17 30067519 30067781 -65204870 - HAL1-3A_ME LINE L1 -419 2439 2156 1 814 1412 55 39 0 chr17 30069124 30069305 -65203346 - B2_Mm2 SINE B2 -5 190 3 1 814 771 230 0 24 chr17 30069353 30069518 -65203133 + RSINE1 SINE B4 3 163 -2 1 814 1182 81 0 7 chr17 30069550 30069699 -65202952 + B1_Mus1 SINE Alu 1 148 0 1 814 241 258 96 11 chr17 30069912 30070006 -65202645 + MTEa LTR MaLR 277 378 -1 1 814 396 313 84 50 chr17 30070115 30070377 -65202274 + L2b LINE L2 3104 3374 -1 1 814 816 231 57 29 chr17 30070987 30071196 -65201455 + B3 SINE B2 2 216 0 1 814 813 251 11 33 chr17 30071506 30071687 -65200964 + MTE2b LTR MaLR 15 191 -188 1 814 1185 270 30 52 chr17 30071688 30072126 -65200525 + Lx8 LINE L1 6905 7332 -141 1 814 254 50 0 24 chr17 30072142 30072183 -65200468 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 1 814 1118 68 0 0 chr17 30072183 30072316 -65200335 - B1_Mus2 SINE Alu -13 134 2 1 814 1022 68 67 20 chr17 30072343 30072492 -65200159 + B2_Mm2 SINE B2 2 157 -38 1 814 299 25 0 24 chr17 30072492 30072533 -65200118 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1 814 1643 42 0 0 chr17 30072633 30072825 -65199826 + B2_Mm1a SINE B2 2 193 0 1 814 22 0 0 0 chr17 30072835 30072857 -65199794 + AT_rich Low_complexity Low_complexity 1 22 0 1 814 886 247 20 10 chr17 30072863 30073059 -65199592 - B3A SINE B2 0 198 1 1 814 571 282 0 0 chr17 30073079 30073203 -65199448 + MTE2b LTR MaLR 169 292 -87 1 814 1119 75 0 0 chr17 30073720 30073853 -65198798 + B1_Mm SINE Alu 3 135 -12 1 814 340 37 0 36 chr17 30073854 30073910 -65198741 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 1 814 686 246 87 25 chr17 30074076 30074114 -65198537 - B3 SINE B2 -7 209 170 1 814 441 0 0 0 chr17 30074114 30074163 -65198488 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 814 686 246 87 25 chr17 30074163 30074320 -65198331 - B3 SINE B2 -47 169 2 1 814 240 362 93 34 chr17 30074677 30074914 -65197737 - L2a LINE L2 -20 3406 3156 1 814 25 0 0 0 chr17 30075150 30075175 -65197476 + AT_rich Low_complexity Low_complexity 1 25 0 1 814 419 271 80 15 chr17 30075179 30075340 -65197311 - B3A SINE B2 -8 208 41 1 814 191 218 18 0 chr17 30075341 30075396 -65197255 + CT-rich Low_complexity Low_complexity 3 58 0 1 814 441 105 333 40 chr17 30075398 30075497 -65197154 - B1_Mur3 SINE Alu -17 132 5 1 814 1358 86 5 21 chr17 30075523 30075714 -65196937 - B2_Mm1a SINE B2 -4 189 2 1 814 290 204 0 0 chr17 30075714 30075768 -65196883 + MTE2b LTR MaLR 326 379 0 1 814 1188 200 24 9 chr17 30076860 30077072 -65195579 + B3 SINE B2 1 215 -1 1 814 1265 48 0 0 chr17 30077079 30077225 -65195426 + B1_Mus2 SINE Alu 2 147 0 1 814 279 0 0 0 chr17 30077236 30077267 -65195384 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 814 1550 62 16 0 chr17 30078412 30078604 -65194047 + B2_Mm2 SINE B2 1 195 0 1 814 883 251 80 117 chr17 30078708 30079033 -65193618 + MTE2a LTR MaLR 10 322 -57 1 814 719 211 33 39 chr17 30079033 30079215 -65193436 - RMER1B Other Other -869 197 17 1 814 316 278 113 46 chr17 30079289 30079440 -65193211 - RSINE1 SINE B4 0 165 5 1 814 190 366 81 0 chr17 30079467 30079590 -65193061 - MIRc SINE MIR -134 134 2 1 814 281 329 31 19 chr17 30079810 30079971 -65192680 + L1ME3A LINE L1 5264 5426 -747 1 814 315 362 54 44 chr17 30079999 30080295 -65192356 + L1ME3A LINE L1 5534 5832 -408 1 814 1539 194 53 19 chr17 30080323 30080701 -65191950 + Lx9 LINE L1 7248 7638 -6 1 814 390 204 45 64 chr17 30080716 30080826 -65191825 + L1ME3A LINE L1 5862 5969 -204 1 814 983 168 0 0 chr17 30081006 30081149 -65191502 + B1_Mur1 SINE Alu 1 143 -6 1 814 757 314 78 17 chr17 30081282 30081626 -65191025 + L3 LINE CR1 3353 3717 -772 1 814 674 243 192 6 chr17 30081966 30082148 -65190503 + ID_B1 SINE B4 6 221 -3 1 814 225 287 126 34 chr17 30082045 30082164 -65190487 - YREP_Mm Unknown Unknown -1534 278 149 1 814 230 175 40 95 chr17 30082246 30082372 -65190279 - RLTR40 LTR ERVK -128 689 571 1 814 233 213 0 0 chr17 30082373 30082420 -65190231 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 814 269 267 124 8 chr17 30082424 30082545 -65190106 - RSINE1 SINE B4 0 165 31 1 814 616 359 147 9 chr17 30082708 30083048 -65189603 + Arthur1 DNA Tip100 8 394 -3553 1 814 1343 76 16 21 chr17 30083217 30083405 -65189246 + B2_Mm2 SINE B2 2 188 -7 1 814 245 281 0 0 chr17 30083494 30083551 -65189100 + Arthur1 DNA Tip100 487 543 -3404 1 814 252 297 110 48 chr17 30083893 30084038 -65188613 - MER5A DNA MER1_type -18 171 18 1 814 241 241 19 0 chr17 30084101 30084155 -65188496 + LTR16A1 LTR ERVL 48 102 -354 1 814 378 0 0 0 chr17 30084162 30084204 -65188447 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 814 193 222 0 22 chr17 30085318 30085364 -65187287 + MIRc SINE MIR 114 158 -110 2 814 801 225 134 0 chr17 30085391 30085578 -65187073 + ID_B1 SINE B4 1 212 -12 2 814 224 30 0 29 chr17 30085578 30085612 -65187039 + (CAA)n Simple_repeat Simple_repeat 1 33 0 2 814 470 308 31 0 chr17 30085618 30085748 -65186903 + ID_B1 SINE B4 79 212 -12 2 814 654 245 53 0 chr17 30086077 30086228 -65186423 - ID_B1 SINE B4 -2 222 64 2 814 319 316 70 0 chr17 30086308 30086422 -65186229 + RMER15 LTR ERVL 454 575 0 2 814 630 233 0 0 chr17 30086444 30086560 -65186091 + RSINE1 SINE B4 2 117 -48 2 814 23 33 0 0 chr17 30086570 30086600 -65186051 + AT_rich Low_complexity Low_complexity 1 30 0 2 814 234 197 16 0 chr17 30086603 30086664 -65185987 + T-rich Low_complexity Low_complexity 5 66 0 2 814 926 167 0 20 chr17 30086664 30086817 -65185834 - B1_Mur4 SINE Alu 0 150 1 2 814 1467 54 37 5 chr17 30086895 30087082 -65185569 - B2_Mm2 SINE B2 -1 194 2 2 814 2237 88 3 65 chr17 30087091 30087430 -65185221 + ORR1A3 LTR MaLR 1 318 -8 2 814 208 265 0 0 chr17 30087649 30087698 -65184953 + L2a LINE L2 3378 3426 0 2 814 207 0 0 0 chr17 30088496 30088519 -65184132 + (A)n Simple_repeat Simple_repeat 1 23 0 2 814 512 161 47 78 chr17 30089205 30089245 -65183406 + B3 SINE B2 1 37 -179 2 814 429 20 0 0 chr17 30089245 30089295 -65183356 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 814 512 167 82 77 chr17 30089295 30089438 -65183213 + B3 SINE B2 38 195 0 2 814 225 341 96 23 chr17 30090465 30090642 -65182009 + RMER15 LTR ERVL 346 535 -40 2 814 2315 174 28 33 chr17 30090703 30091162 -65181489 + RLTR31A_Mm LTR ERVK 6 462 -122 2 814 1015 191 5 5 chr17 30091182 30091392 -65181259 - RLTR31A_Mm LTR ERVK -348 236 27 2 814 897 213 54 15 chr17 30091536 30091741 -65180910 + B3 SINE B2 1 213 -3 2 814 946 61 119 22 chr17 30091768 30091902 -65180749 - B1_Mus2 SINE Alu 0 147 1 2 814 643 129 11 0 chr17 30091906 30091999 -65180652 - B1_Mus2 SINE Alu -1 146 53 2 814 231 276 51 38 chr17 30091948 30092027 -65180624 - RLTR25B LTR ERVK -526 502 423 2 814 701 266 21 53 chr17 30092179 30092366 -65180285 - B4 SINE B4 0 292 112 2 814 387 60 0 0 chr17 30092368 30092418 -65180233 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 814 37 44 0 14 chr17 30092427 30092455 -65180196 + AT_rich Low_complexity Low_complexity 1 28 0 2 814 994 143 0 7 chr17 30092455 30092603 -65180048 + B1_Mus2 SINE Alu 1 147 0 2 814 37 44 0 14 chr17 30092603 30092643 -65180008 + AT_rich Low_complexity Low_complexity 1 40 0 2 814 210 71 0 0 chr17 30092780 30092808 -65179843 + (GGA)n Simple_repeat Simple_repeat 2 29 0 2 814 262 310 184 37 chr17 30092894 30093112 -65179539 - MLT1C LTR MaLR -162 305 56 2 814 307 353 75 21 chr17 30093168 30093356 -65179295 + HAL1 LINE L1 523 720 -1787 2 814 893 86 0 0 chr17 30093579 30093696 -65178955 + B2_Mm2 SINE B2 2 118 -77 2 814 315 65 0 0 chr17 30093726 30093772 -65178879 + (CAGA)n Simple_repeat Simple_repeat 2 47 0 2 814 379 299 65 86 chr17 30093790 30093929 -65178722 + RSINE1 SINE B4 21 156 -9 2 814 945 95 107 7 chr17 30094015 30094164 -65178487 - B2_Mm2 SINE B2 -3 192 29 2 814 4096 120 60 5 chr17 30094166 30094779 -65177872 - RMER6A LTR ERVK -54 702 52 2 814 219 69 0 0 chr17 30094779 30094808 -65177843 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 2 814 4096 120 60 5 chr17 30094808 30094857 -65177794 - RMER6A LTR ERVK -705 51 3 2 814 770 256 24 33 chr17 30094860 30095070 -65177581 + B3 SINE B2 1 208 -8 2 814 302 342 63 0 chr17 30095136 30095247 -65177404 + B4A SINE B4 81 198 -94 2 814 511 208 10 0 chr17 30095156 30095257 -65177394 + PB1D10 SINE Alu 16 117 0 2 814 298 95 0 0 chr17 30095309 30095351 -65177300 + B1_Mus2 SINE Alu 87 128 -19 2 814 195 42 0 0 chr17 30095351 30095375 -65177276 + (TTAA)n Simple_repeat Simple_repeat 4 27 0 2 814 300 235 132 0 chr17 30095591 30095659 -65176992 + PB1D7 SINE Alu 39 115 -5 2 814 304 327 90 32 chr17 30095673 30095828 -65176823 + HAL1-3A_ME LINE L1 2285 2448 -410 2 814 741 302 13 0 chr17 30095969 30096128 -65176523 + RSINE1 SINE B4 3 163 -2 2 814 290 361 102 53 chr17 30096128 30096156 -65176495 + B3A SINE B2 2 197 -1 2 814 518 299 130 40 chr17 30096157 30096603 -65176048 + HAL1 LINE L1 1428 1913 -594 2 814 329 378 0 8 chr17 30096604 30096724 -65175927 + PB1 SINE Alu 2 120 -7 2 814 792 174 179 6 chr17 30096799 30096967 -65175684 + B3 SINE B2 2 198 -18 2 814 21 36 0 0 chr17 30097024 30097052 -65175599 + AT_rich Low_complexity Low_complexity 1 28 0 2 814 471 270 0 0 chr17 30097182 30097282 -65175369 + RSINE1 SINE B4 3 102 -63 2 814 501 17 0 0 chr17 30097306 30097364 -65175287 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 814 207 0 0 0 chr17 30097368 30097391 -65175260 + (GA)n Simple_repeat Simple_repeat 2 24 0 2 814 1598 32 16 0 chr17 30097465 30097651 -65175000 - B2_Mm1t SINE B2 -4 189 1 2 814 281 280 57 79 chr17 30097664 30097893 -65174758 + HAL1 LINE L1 2256 2479 -28 2 814 761 243 74 11 chr17 30097939 30098114 -65174537 + ID_B1 SINE B4 32 217 -7 2 814 261 331 14 50 chr17 30098003 30098072 -65174579 - YREP_Mm Unknown Unknown -1520 292 195 2 814 264 170 64 0 chr17 30098072 30098119 -65174532 + PB1D10 SINE Alu 66 115 -2 2 814 261 331 14 50 chr17 30098119 30098143 -65174508 - YREP_Mm Unknown Unknown -1520 194 158 2 814 444 302 4 52 chr17 30098524 30098736 -65173915 + MER2 DNA MER2_type 98 338 -7 2 814 873 302 88 92 chr17 30098757 30099075 -65173576 - MLT1D LTR MaLR -4 501 171 2 814 440 264 111 79 chr17 30099075 30099264 -65173387 - B3A SINE B2 -3 195 1 2 814 873 302 88 92 chr17 30099264 30099448 -65173203 - MLT1D LTR MaLR -335 170 1 2 814 1148 69 14 0 chr17 30099486 30099630 -65173021 + B1_Mus2 SINE Alu 1 146 -1 2 814 279 0 0 0 chr17 30099636 30099667 -65172984 + (TC)n Simple_repeat Simple_repeat 2 32 0 2 814 615 263 61 75 chr17 30099712 30099926 -65172725 - B4 SINE B4 -67 225 15 2 814 2133 127 141 3 chr17 30100059 30100429 -65172222 - MTC LTR MaLR 0 421 1 2 814 233 255 0 0 chr17 30102224 30102275 -65170376 + G-rich Low_complexity Low_complexity 1 51 0 2 814 1120 69 28 0 chr17 30103792 30103936 -65168715 + B1_Mus1 SINE Alu 1 148 0 2 814 1114 163 56 51 chr17 30103989 30104203 -65168448 + B3 SINE B2 2 216 0 2 814 1014 113 0 21 chr17 30104240 30104385 -65168266 + B1_Mur3 SINE Alu 2 143 -6 2 814 243 0 0 0 chr17 30104386 30104413 -65168238 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 2 814 240 278 110 30 chr17 30104414 30104514 -65168137 + PB1D9 SINE Alu 2 109 -11 2 814 515 127 71 0 chr17 30104518 30104644 -65168007 + (TATATG)n Simple_repeat Simple_repeat 1 135 0 2 814 441 54 0 0 chr17 30104666 30104722 -65167929 + (TC)n Simple_repeat Simple_repeat 2 57 0 2 814 784 289 39 43 chr17 30104739 30104996 -65167655 - B4A SINE B4 -35 257 2 2 814 444 321 39 56 chr17 30105228 30105406 -65167245 - MIRb SINE MIR -7 261 87 2 814 276 221 11 80 chr17 30105426 30105528 -65167123 + L1M5 LINE L1 5683 5778 -581 2 814 494 254 70 16 chr17 30105863 30105991 -65166660 + RSINE1 SINE B4 2 136 -29 2 814 304 279 0 112 chr17 30106085 30106210 -65166441 + RSINE1 SINE B4 55 165 0 2 814 535 222 12 12 chr17 30106226 30106399 -65166252 + (CATATA)n Simple_repeat Simple_repeat 6 178 0 2 814 301 132 0 70 chr17 30106410 30106467 -65166184 + HAL1-3A_ME LINE L1 1976 2028 -830 2 814 272 308 0 25 chr17 30107061 30107181 -65165470 + CT-rich Low_complexity Low_complexity 6 122 0 2 814 455 171 9 0 chr17 30107411 30107516 -65165135 + (CA)n Simple_repeat Simple_repeat 1 106 0 2 814 325 109 0 0 chr17 30107516 30107562 -65165089 + HAL1-3A_ME LINE L1 1975 2020 -838 2 814 988 117 0 22 chr17 30107565 30107748 -65164903 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 814 234 304 146 63 chr17 30108372 30108530 -65164121 - LTR33 LTR ERVL -344 171 1 2 814 296 295 69 46 chr17 30109030 30109204 -65163447 + L2 LINE L2 2732 2909 -510 2 814 461 217 157 8 chr17 30109319 30109402 -65163249 + ID_B1 SINE B4 86 184 -40 2 814 207 100 0 0 chr17 30109402 30109432 -65163219 + (CATA)n Simple_repeat Simple_repeat 2 31 0 2 814 461 217 157 8 chr17 30109432 30109469 -65163182 + ID_B1 SINE B4 185 223 -1 2 814 459 279 146 24 chr17 30109504 30109669 -65162982 + B3A SINE B2 5 189 -9 2 814 473 113 0 40 chr17 30109700 30109774 -65162877 - B1_Mur1 SINE Alu 0 149 79 2 814 700 131 114 15 chr17 30110032 30110164 -65162487 + B1_Mur2 SINE Alu 3 147 -2 2 814 453 84 0 0 chr17 30110245 30110316 -65162335 + (CA)n Simple_repeat Simple_repeat 2 72 0 2 814 388 331 12 18 chr17 30110361 30110524 -65162127 - L1ME3A LINE L1 -228 5945 5784 2 814 240 231 15 0 chr17 30110597 30110662 -65161989 + A-rich Low_complexity Low_complexity 6 71 0 2 814 207 69 0 0 chr17 30111193 30111222 -65161429 + (T)n Simple_repeat Simple_repeat 1 29 0 2 814 973 276 34 27 chr17 30111242 30111540 -65161111 + MTE2a LTR MaLR 4 303 -76 2 814 300 357 71 10 chr17 30111614 30111812 -65160839 + MIRb SINE MIR 26 235 -33 2 814 501 200 0 11 chr17 30112128 30112219 -65160432 + RSINE1 SINE B4 16 105 -60 2 814 332 237 51 0 chr17 30112211 30112270 -65160381 + RSINE1 SINE B4 63 124 -41 2 814 363 44 0 0 chr17 30112270 30112315 -65160336 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 814 309 219 0 27 chr17 30113170 30113245 -65159406 + ID4 SINE ID 1 73 -10 2 814 207 0 0 0 chr17 30113335 30113358 -65159293 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2 814 610 247 27 0 chr17 30113391 30113541 -65159110 - ID_B1 SINE B4 -2 222 69 3 814 184 283 0 16 chr17 30113712 30113773 -65158878 - MIRc SINE MIR -134 134 75 3 814 1738 16 0 0 chr17 30114201 30114393 -65158258 + B2_Mm1a SINE B2 2 193 0 3 814 180 0 0 0 chr17 30114408 30114428 -65158223 + (A)n Simple_repeat Simple_repeat 1 20 0 3 814 410 271 18 45 chr17 30114750 30114862 -65157789 - PB1D7 SINE Alu 0 120 12 3 814 850 184 0 7 chr17 30115072 30115214 -65157437 - B1_Mur4 SINE Alu -1 149 9 3 814 807 167 19 31 chr17 30115231 30115416 -65157235 - B3 SINE B2 -9 186 6 3 814 1614 42 0 0 chr17 30115440 30115629 -65157022 - B2_Mm1a SINE B2 -4 189 1 3 814 490 222 36 13 chr17 30115657 30115800 -65156851 - B4A SINE B4 -145 147 3 3 814 274 407 98 6 chr17 30115805 30115978 -65156673 + MLT1J LTR MaLR 239 427 -85 3 814 202 297 0 0 chr17 30116519 30116593 -65156058 + (TG)n Simple_repeat Simple_repeat 1 74 0 3 814 432 0 0 0 chr17 30116643 30116691 -65155960 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 814 737 199 29 0 chr17 30116750 30116886 -65155765 - B1F2 SINE Alu -9 140 1 3 814 243 208 38 0 chr17 30117158 30117211 -65155440 + C-rich Low_complexity Low_complexity 3 57 0 3 814 1216 89 0 6 chr17 30117548 30117717 -65154934 - B2_Mm2 SINE B2 -26 169 2 3 814 424 284 50 92 chr17 30118606 30118937 -65153714 + ORR1E LTR MaLR 21 327 -43 3 814 574 299 51 0 chr17 30118963 30119120 -65153531 + B4A SINE B4 57 221 -71 3 814 1595 231 71 63 chr17 30119273 30119796 -65152855 - RLTR11A2 LTR ERVK 0 527 1 3 814 287 266 0 15 chr17 30119797 30119862 -65152789 - MIR SINE MIR -91 171 108 3 814 237 33 0 0 chr17 30119977 30120007 -65152644 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 814 635 192 227 23 chr17 30120017 30120193 -65152458 - B3 SINE B2 -4 212 1 3 814 333 0 0 0 chr17 30120308 30120345 -65152306 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 814 1767 151 48 62 chr17 30121359 30121389 -65151262 - RMER17C LTR ERVK 0 410 382 3 814 1385 57 33 17 chr17 30121389 30121569 -65151082 + B2_Mm2 SINE B2 4 186 -9 3 814 1767 151 48 62 chr17 30121569 30121954 -65150697 - RMER17C LTR ERVK -29 381 1 3 814 21 0 0 0 chr17 30122400 30122421 -65150230 + AT_rich Low_complexity Low_complexity 1 21 0 3 814 558 43 0 0 chr17 30122880 30122949 -65149702 + (TCCC)n Simple_repeat Simple_repeat 4 72 0 3 814 180 200 0 0 chr17 30122951 30122991 -65149660 + CT-rich Low_complexity Low_complexity 2 41 0 3 814 420 156 0 0 chr17 30123110 30123219 -65149432 + (TG)n Simple_repeat Simple_repeat 2 110 0 3 814 335 194 30 0 chr17 30123237 30123304 -65149347 - HAL1-3A_ME LINE L1 -840 2018 1950 3 814 483 236 15 179 chr17 30123338 30123472 -65149179 + B3A SINE B2 82 197 -1 3 814 1133 74 0 26 chr17 30123479 30123631 -65149020 + B1_Mus1 SINE Alu 1 148 0 3 814 583 180 0 69 chr17 30124075 30124206 -65148445 + B1_Mm SINE Alu 26 147 0 3 814 1146 48 20 7 chr17 30124208 30124354 -65148297 + B1_Mus1 SINE Alu 1 148 0 3 814 207 0 0 0 chr17 30124354 30124377 -65148274 + (A)n Simple_repeat Simple_repeat 1 23 0 3 814 213 132 0 26 chr17 30124380 30124419 -65148232 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 3 814 261 0 0 0 chr17 30124419 30124448 -65148203 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 814 189 0 0 0 chr17 30124501 30124522 -65148129 + (T)n Simple_repeat Simple_repeat 1 21 0 3 814 1309 14 0 0 chr17 30124530 30124677 -65147974 - B1_Mm SINE Alu 0 147 1 3 814 495 196 45 45 chr17 30124728 30124840 -65147811 + PB1D9 SINE Alu 9 120 0 3 814 504 184 0 0 chr17 30124842 30124945 -65147706 + GA-rich Low_complexity Low_complexity 3 105 0 3 814 866 218 111 5 chr17 30125629 30125846 -65146805 + B4A SINE B4 15 254 -38 3 814 216 0 0 0 chr17 30126567 30126591 -65146060 + (CG)n Simple_repeat Simple_repeat 2 25 0 3 814 1054 289 109 30 chr17 30126718 30127497 -65145154 - L1MB8 LINE L1 -151 6023 5199 3 814 26 30 0 0 chr17 30127525 30127558 -65145093 + AT_rich Low_complexity Low_complexity 1 33 0 3 814 772 177 137 6 chr17 30127558 30127740 -65144911 - B3 SINE B2 -10 206 1 3 814 1069 75 19 0 chr17 30128025 30128185 -65144466 + (CATA)n Simple_repeat Simple_repeat 4 166 0 3 814 287 169 167 14 chr17 30128208 30128280 -65144371 - RSINE1 SINE B4 -12 153 71 3 814 248 354 21 10 chr17 30128294 30128391 -65144260 - MIRb SINE MIR -133 135 38 3 814 228 320 0 0 chr17 30128417 30128467 -65144184 - B1_Mus2 SINE Alu -96 51 2 3 814 643 300 41 19 chr17 30128467 30128667 -65143984 - ID_B1 SINE B4 -64 228 23 3 814 2425 188 26 16 chr17 30128922 30129419 -65143232 + RLTR11A2 LTR ERVK 26 527 0 3 814 496 225 67 44 chr17 30129599 30129734 -65142917 - ID_B1 SINE B4 -1 223 86 3 814 311 351 44 44 chr17 30129739 30129921 -65142730 - L1ME3A LINE L1 -195 5978 5797 3 814 256 397 20 7 chr17 30129933 30130080 -65142571 + MIRc SINE MIR 20 168 -100 3 814 474 232 62 9 chr17 30130104 30130217 -65142434 + ID_B1 SINE B4 100 218 -6 3 814 1178 68 0 0 chr17 30131380 30131526 -65141125 + B1_Mm SINE Alu 2 147 0 3 814 214 315 0 40 chr17 30131551 30131563 -65141088 + B4A SINE B4 74 82 -210 3 814 273 281 0 33 chr17 30131563 30131648 -65141003 + PB1 SINE Alu 1 80 -234 3 814 294 297 0 0 chr17 30131669 30131733 -65140918 + ID4_ SINE ID 7 70 -13 3 814 227 229 0 40 chr17 30132230 30132280 -65140371 + Alu SINE Alu 123 170 -5 3 814 750 46 269 0 chr17 30132282 30132390 -65140261 + B1_Mm SINE Alu 2 138 -9 3 814 311 0 0 25 chr17 30132390 30132430 -65140221 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 814 429 95 0 0 chr17 30132430 30132493 -65140158 + (GGAA)n Simple_repeat Simple_repeat 3 65 0 3 814 390 307 30 52 chr17 30132494 30132628 -65140023 + B1F SINE Alu 1 131 -18 3 814 422 241 116 0 chr17 30132668 30132780 -65139871 + B3A SINE B2 3 127 -71 3 814 288 0 0 0 chr17 30132806 30132838 -65139813 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 814 369 240 134 10 chr17 30132844 30132941 -65139710 + PB1D10 SINE Alu 3 111 -6 3 814 334 331 122 0 chr17 30133077 30133216 -65139435 + MLT1A0 LTR MaLR 142 297 -68 3 814 1226 169 121 19 chr17 30133216 30133481 -65139170 + B4A SINE B4 1 292 0 3 814 239 301 9 0 chr17 30133500 30133613 -65139038 + (CA)n Simple_repeat Simple_repeat 2 115 0 3 814 455 214 0 0 chr17 30133623 30133707 -65138944 + MLT1A0 LTR MaLR 282 365 0 3 814 474 298 144 16 chr17 30133707 30133901 -65138750 + MLT2B1 LTR ERVL 129 347 -173 3 814 518 298 58 29 chr17 30134027 30134200 -65138451 + B3A SINE B2 5 182 -16 3 814 270 217 0 0 chr17 30134204 30134273 -65138378 + (CA)n Simple_repeat Simple_repeat 1 69 0 3 814 831 128 53 0 chr17 30134307 30134395 -65138256 + B1_Mm SINE Alu 1 88 -59 3 814 522 0 0 0 chr17 30134395 30134453 -65138198 + (GA)n Simple_repeat Simple_repeat 2 59 0 3 814 831 128 53 0 chr17 30134453 30134497 -65138154 + B1_Mm SINE Alu 89 138 -9 3 814 253 269 0 69 chr17 30135203 30135275 -65137376 - B1F2 SINE Alu -34 115 49 3 814 26 30 0 0 chr17 30135785 30135818 -65136833 + GC_rich Low_complexity Low_complexity 1 33 0 3 814 384 285 22 44 chr17 30136448 30136584 -65136067 - ZP3AR Satellite Satellite -38 174 42 3 814 953 153 0 0 chr17 30136615 30136765 -65135886 + B1_Mur4 SINE Alu 1 150 0 3 814 285 75 0 0 chr17 30136813 30136853 -65135798 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 814 262 259 323 0 chr17 30136858 30136985 -65135666 - B3A SINE B2 -30 168 1 3 814 302 285 65 14 chr17 30136985 30137124 -65135527 - B1F1 SINE Alu 0 149 4 3 814 456 19 0 0 chr17 30137124 30137177 -65135474 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 814 573 242 45 8 chr17 30137178 30137311 -65135340 - RSINE1 SINE B4 -25 140 3 3 814 762 158 0 22 chr17 30137587 30137723 -65134928 - BC1_Mm scRNA scRNA -19 133 1 3 814 1227 48 0 0 chr17 30137773 30137919 -65134732 + B1_Mus2 SINE Alu 2 147 0 3 814 270 81 0 0 chr17 30137919 30137956 -65134695 + (A)n Simple_repeat Simple_repeat 1 37 0 3 814 623 134 20 0 chr17 30138045 30138150 -65134501 - B3 SINE B2 -76 119 2 3 814 234 0 0 0 chr17 30138160 30138186 -65134465 + (T)n Simple_repeat Simple_repeat 1 26 0 3 814 544 226 58 72 chr17 30138186 30138324 -65134327 - B1_Mur1 SINE Alu 0 149 14 3 814 531 239 4 24 chr17 30138517 30138646 -65134005 - B1_Mus1 SINE Alu -21 128 10 3 814 419 260 0 37 chr17 30138889 30138997 -65133654 - PB1D10 SINE Alu -13 104 1 3 814 475 299 16 16 chr17 30139069 30139198 -65133453 - RSINE1 SINE B4 0 165 37 3 814 581 147 17 23 chr17 30139203 30139377 -65133274 + (CA)n Simple_repeat Simple_repeat 2 174 0 3 814 566 278 0 2 chr17 30140226 30140360 -65132291 - B1_Mur2 SINE Alu -19 131 1 3 814 195 213 0 0 chr17 30142038 30142113 -65130538 + C-rich Low_complexity Low_complexity 6 80 0 3 814 209 108 0 26 chr17 30142138 30142176 -65130475 + (CCG)n Simple_repeat Simple_repeat 1 37 0 3 814 202 292 0 70 chr17 30142249 30142378 -65130273 + G-rich Low_complexity Low_complexity 2 121 0 3 814 219 204 0 0 chr17 30142416 30142470 -65130181 + GA-rich Low_complexity Low_complexity 1 54 0 3 814 300 264 44 0 chr17 30142938 30143029 -65129622 + HAL1-2a_MD LINE L1 2362 2456 -568 3 814 366 268 165 31 chr17 30145995 30146122 -65126529 - B1F SINE Alu -5 144 1 3 814 637 184 0 29 chr17 30146248 30146370 -65126281 + B1_Mur1 SINE Alu 9 125 -25 4 814 252 0 0 0 chr17 30146385 30146413 -65126238 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 814 180 0 0 0 chr17 30146413 30146433 -65126218 + (CCCA)n Simple_repeat Simple_repeat 1 20 0 4 814 317 326 151 0 chr17 30146456 30146542 -65126109 + RSINE1 SINE B4 4 102 -63 4 815 1011 233 119 72 chr17 30146786 30147147 -65125504 - Lx8 LINE L1 -326 7147 6770 4 815 356 242 58 8 chr17 30147143 30147264 -65125387 - L1_Mur3 LINE L1 -3555 2325 2199 4 815 576 216 44 30 chr17 30147280 30147458 -65125193 - B3 SINE B2 -10 185 7 4 815 237 234 29 78 chr17 30147540 30147611 -65125040 - B1F1 SINE Alu 0 149 84 4 815 1235 148 47 14 chr17 30147611 30147823 -65124828 + URR1B DNA MER1_type 2 220 -5 4 815 255 257 230 0 chr17 30147828 30147902 -65124749 - B1_Mur2 SINE Alu -57 92 2 4 815 309 252 61 79 chr17 30147928 30148092 -65124559 - L1MEb LINE L1 -5268 802 642 4 815 192 77 0 0 chr17 30148092 30148118 -65124533 + (T)n Simple_repeat Simple_repeat 1 26 0 4 815 251 243 321 0 chr17 30148169 30148412 -65124239 - L1_Mur3 LINE L1 -4006 1874 1554 4 815 1116 82 0 7 chr17 30148413 30148560 -65124091 - B1_Mus2 SINE Alu 0 147 2 4 815 343 289 55 138 chr17 30148570 30148895 -65123756 - L1M4b LINE L1 -5663 1671 1374 4 815 207 161 0 0 chr17 30148959 30149015 -65123636 + (TA)n Simple_repeat Simple_repeat 1 56 0 4 815 1383 71 37 26 chr17 30149945 30150134 -65122517 - B2_Mm2 SINE B2 -4 191 1 4 815 524 248 0 41 chr17 30150137 30150259 -65122392 - PB1D9 SINE Alu -2 118 2 4 815 1228 41 0 0 chr17 30150365 30150512 -65122139 + B1_Mus2 SINE Alu 1 147 0 4 815 312 91 0 0 chr17 30150512 30150556 -65122095 + (A)n Simple_repeat Simple_repeat 1 44 0 4 815 369 236 83 19 chr17 30151097 30151205 -65121446 - B1F SINE Alu -26 123 9 4 815 783 245 51 5 chr17 30151734 30151931 -65120720 - B3 SINE B2 -9 207 2 4 815 354 283 104 0 chr17 30151941 30152047 -65120604 - ID_B1 SINE B4 -5 219 103 4 815 555 56 0 0 chr17 30152050 30152121 -65120530 + (TG)n Simple_repeat Simple_repeat 2 72 0 4 815 717 161 0 75 chr17 30153309 30153443 -65119208 - B1_Mus1 SINE Alu -23 125 2 4 815 489 206 65 9 chr17 30153355 30153463 -65119188 - B4 SINE B4 -113 179 66 4 815 198 296 123 22 chr17 30153932 30154070 -65118581 - L2 LINE L2 -557 2862 2711 4 815 1230 41 0 13 chr17 30154613 30154762 -65117889 - B1_Mm SINE Alu 0 147 1 4 815 1170 67 127 0 chr17 30155041 30155206 -65117445 - B2_Mm2 SINE B2 -8 187 2 4 815 868 110 16 0 chr17 30155224 30155351 -65117300 - B1_Mur3 SINE Alu 0 149 21 4 815 450 43 40 67 chr17 30155370 30155445 -65117206 - L1_Mus2 LINE L1 0 6566 6494 4 815 249 217 21 32 chr17 30155939 30156005 -65116646 - Lx9 LINE L1 0 7644 7581 4 815 273 109 0 0 chr17 30156005 30156051 -65116600 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 815 249 217 21 32 chr17 30156051 30156079 -65116572 - Lx9 LINE L1 -64 7580 7551 4 815 268 236 0 0 chr17 30156092 30156147 -65116504 - Lx9 LINE L1 -188 7456 7402 4 815 723 144 0 0 chr17 30157469 30157580 -65115071 + B1_Mus1 SINE Alu 28 138 -10 4 815 188 0 74 0 chr17 30157580 30157607 -65115044 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 815 201 243 0 0 chr17 30158335 30158372 -65114279 + polypyrimidine Low_complexity Low_complexity 3 39 0 4 815 207 0 0 0 chr17 30158385 30158408 -65114243 + (TC)n Simple_repeat Simple_repeat 2 24 0 4 815 1154 75 0 0 chr17 30159058 30159205 -65113446 - B1_Mus1 SINE Alu 0 148 2 4 815 234 259 122 11 chr17 30159667 30159757 -65112894 + Tigger15a DNA TcMar 473 572 -143 4 815 369 310 34 8 chr17 30160061 30160178 -65112473 - RSINE1 SINE B4 -36 129 10 4 815 344 230 87 144 chr17 30160300 30160473 -65112178 - B3A SINE B2 -35 163 1 4 815 1098 74 0 0 chr17 30160552 30160687 -65111964 + B1_Mus1 SINE Alu 2 136 -12 4 815 313 22 43 0 chr17 30160687 30160733 -65111918 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 4 815 271 319 8 40 chr17 30160858 30160982 -65111669 - MLT1A LTR MaLR -179 195 76 4 815 969 70 16 0 chr17 30161179 30161308 -65111343 - B1_Mus2 SINE Alu 0 147 17 4 815 1185 52 0 25 chr17 30161899 30162058 -65110593 + B2_Mm1a SINE B2 38 192 -1 4 815 429 20 0 0 chr17 30162058 30162108 -65110543 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 815 610 219 106 53 chr17 30163075 30163263 -65109388 + B3A SINE B2 1 198 0 4 815 1521 38 11 5 chr17 30163331 30163517 -65109134 - B2_Mm1t SINE B2 -6 187 1 4 815 476 287 40 34 chr17 30165125 30165273 -65107378 + B1F SINE Alu 1 149 0 4 815 241 284 135 10 chr17 30165735 30165831 -65106820 - ORR1D1 LTR MaLR -216 158 51 4 815 275 218 18 0 chr17 30166286 30166341 -65106310 + B4A SINE B4 2 57 -235 4 815 314 325 26 5 chr17 30166358 30166509 -65106142 - L1MEb LINE L1 -5887 183 32 4 815 359 328 126 29 chr17 30166668 30166984 -65105667 - L1ME2 LINE L1 -120 6053 5718 4 815 315 0 0 0 chr17 30166988 30167023 -65105628 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 815 201 74 0 0 chr17 30167083 30167110 -65105541 + (T)n Simple_repeat Simple_repeat 1 27 0 4 815 231 318 59 0 chr17 30167627 30167712 -65104939 + ORR1E LTR MaLR 3 92 -267 4 815 22 35 0 0 chr17 30168179 30168208 -65104443 + AT_rich Low_complexity Low_complexity 1 29 0 4 815 22 35 0 0 chr17 30170165 30170194 -65102457 + AT_rich Low_complexity Low_complexity 1 29 0 4 815 507 254 171 22 chr17 30170621 30170802 -65101849 - B3 SINE B2 -5 211 4 4 815 697 196 44 82 chr17 30170808 30171014 -65101637 - B3A SINE B2 0 198 1 4 815 774 64 321 0 chr17 30171488 30171597 -65101054 - B1_Mus1 SINE Alu 0 148 5 4 815 201 195 0 24 chr17 30171938 30171980 -65100671 + CT-rich Low_complexity Low_complexity 2 42 0 4 815 373 250 129 47 chr17 30172509 30172702 -65099949 + L1M4 LINE L1 2700 2908 -3238 4 815 378 179 34 86 chr17 30172704 30172816 -65099835 + B1_Mur3 SINE Alu 2 104 -43 4 815 555 293 161 15 chr17 30172819 30173211 -65099440 + L1M4 LINE L1 2928 3376 -2770 4 815 263 213 116 11 chr17 30173254 30173349 -65099302 + L1M4 LINE L1 3459 3563 -2583 4 815 317 176 0 0 chr17 30173352 30173422 -65099229 + polypyrimidine Low_complexity Low_complexity 1 70 0 4 815 925 152 14 7 chr17 30173422 30173568 -65099083 - B1_Mur3 SINE Alu 0 149 3 4 815 238 145 16 31 chr17 30173635 30173699 -65098952 + GA-rich Low_complexity Low_complexity 3 65 0 4 815 483 319 74 0 chr17 30173725 30173941 -65098710 + L1M4 LINE L1 3702 3933 -2213 4 815 1264 61 0 0 chr17 30173962 30174110 -65098541 - B1_Mus1 SINE Alu 0 148 1 4 815 1168 56 0 77 chr17 30174211 30174367 -65098284 - B1_Mus2 SINE Alu -2 145 2 4 815 1072 234 156 65 chr17 30174701 30175405 -65097246 - L1MC1 LINE L1 -195 6138 5371 4 815 281 213 21 0 chr17 30175419 30175466 -65097185 - ID4 SINE ID -8 75 28 4 815 613 202 261 12 chr17 30175930 30176095 -65096556 - B3 SINE B2 -9 207 2 4 815 390 267 144 74 chr17 30176423 30176666 -65095985 - L1M5 LINE L1 -2259 3887 3628 4 815 301 285 105 39 chr17 30176918 30177209 -65095442 - L1ME3 LINE L1 -30 6132 5825 4 815 329 309 12 0 chr17 30177478 30177559 -65095092 - ID SINE ID -140 84 3 4 815 1221 44 0 0 chr17 30177714 30177849 -65094802 + B1_Mus2 SINE Alu 3 137 -10 4 815 431 192 14 0 chr17 30178397 30178470 -65094181 - ID_B1 SINE B4 -9 215 142 4 815 244 188 135 101 chr17 30178470 30178486 -65094165 - PB1D7 SINE Alu -9 111 20 4 815 253 283 77 14 chr17 30178659 30178762 -65093889 - B1F2 SINE Alu -12 105 1 4 815 727 171 126 74 chr17 30180134 30180324 -65092327 - B3 SINE B2 -14 202 3 4 815 1093 109 48 120 chr17 30180713 30180922 -65091729 - B2_Mm2 SINE B2 0 195 2 4 815 578 209 8 34 chr17 30181114 30181233 -65091418 - B1F SINE Alu -29 120 5 4 815 276 304 38 12 chr17 30181325 30181405 -65091246 - BC1_Mm scRNA scRNA -69 83 2 4 815 432 0 0 0 chr17 30183197 30183245 -65089406 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 815 1094 94 131 29 chr17 30183468 30183643 -65089008 - B2_Mm1t SINE B2 0 193 1 4 815 603 233 8 57 chr17 30184192 30184315 -65088336 + RSINE1 SINE B4 27 143 -22 4 815 21 36 0 0 chr17 30184322 30184350 -65088301 + AT_rich Low_complexity Low_complexity 1 28 0 4 815 832 220 49 11 chr17 30184791 30184975 -65087676 - B3 SINE B2 -21 195 5 4 815 464 266 55 140 chr17 30184996 30185398 -65087253 - L1M4 LINE L1 -398 5776 5396 4 815 731 203 14 7 chr17 30185398 30185537 -65087114 - B1_Mur4 SINE Alu -7 143 4 4 815 464 266 55 140 chr17 30185537 30185663 -65086988 - L1M4 LINE L1 -779 5395 5293 4 815 329 271 69 31 chr17 30185938 30186134 -65086517 - L1MB7 LINE L1 -2 6177 5977 4 815 364 274 107 107 chr17 30186956 30187181 -65085470 + L1_Rod LINE L1 5623 5847 0 4 815 21 36 0 0 chr17 30187520 30187548 -65085103 + AT_rich Low_complexity Low_complexity 1 28 0 4 815 344 224 184 0 chr17 30187878 30187976 -65084675 + RSINE1 SINE B4 3 118 -47 4 815 1461 85 16 0 chr17 30188060 30188249 -65084402 - B2_Mm1t SINE B2 -1 192 1 4 815 188 389 13 39 chr17 30189381 30189536 -65083115 + MIRb SINE MIR 11 161 -107 4 815 21 0 0 0 chr17 30189707 30189728 -65082923 + AT_rich Low_complexity Low_complexity 1 21 0 4 815 264 236 69 0 chr17 30189758 30189830 -65082821 - L1MA8 LINE L1 -44 6247 6171 4 815 322 243 120 67 chr17 30189923 30189955 -65082696 - L1M3 LINE L1 -755 5385 5360 4 815 451 232 71 9 chr17 30189955 30190068 -65082583 - PB1D9 SINE Alu 0 120 1 4 815 322 243 120 67 chr17 30190068 30190260 -65082391 - L1M3 LINE L1 -781 5359 5149 4 815 1206 81 0 20 chr17 30190264 30190415 -65082236 - B1_Mus1 SINE Alu 0 148 1 5 815 22 0 0 0 chr17 30190820 30190842 -65081809 + AT_rich Low_complexity Low_complexity 1 22 0 5 815 431 253 11 0 chr17 30191040 30191127 -65081524 + PB1D7 SINE Alu 32 119 -1 5 815 741 148 32 8 chr17 30191493 30191616 -65081035 - B1_Mus2 SINE Alu -20 127 2 5 815 382 252 17 101 chr17 30191509 30191628 -65081023 - MT2B LTR ERVL -337 264 156 5 815 358 306 51 37 chr17 30191651 30191868 -65080783 - RLTR19-int LTR ERVK -4153 1984 1765 5 815 729 165 90 0 chr17 30192435 30192568 -65080083 + B1_Mus2 SINE Alu 1 145 -2 5 815 383 214 82 45 chr17 30192946 30193092 -65079559 - B3 SINE B2 0 216 35 5 815 347 338 85 30 chr17 30193092 30193257 -65079394 - B4A SINE B4 -48 244 71 5 815 470 288 69 114 chr17 30193278 30193584 -65079067 + B4A SINE B4 1 292 0 5 815 1793 29 0 0 chr17 30194019 30194224 -65078427 + L1Md_A LINE L1 6378 6582 0 5 815 277 204 0 53 chr17 30194929 30194986 -65077665 + RSINE1 SINE B4 108 161 -4 5 815 501 279 28 14 chr17 30195064 30195206 -65077445 + ID_B1 SINE B4 81 224 0 5 815 219 315 227 17 chr17 30195392 30195802 -65076849 - L2 LINE L2 -424 2995 2500 5 815 297 0 0 0 chr17 30195954 30195987 -65076664 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 5 815 255 336 26 52 chr17 30196480 30196596 -65076055 - PB1D10 SINE Alu -2 115 3 5 815 396 167 0 0 chr17 30197675 30197747 -65074904 + T-rich Low_complexity Low_complexity 1 72 0 5 815 261 285 44 89 chr17 30198186 30198321 -65074330 + MIR SINE MIR 36 165 -103 5 815 927 318 75 78 chr17 30198468 30199093 -65073558 - MER67B LTR ERV1 0 661 39 5 815 742 226 76 13 chr17 30199793 30199950 -65072701 + ID_B1 SINE B4 2 168 -56 5 815 229 51 0 49 chr17 30199963 30200004 -65072647 + (CCCCCT)n Simple_repeat Simple_repeat 1 39 0 5 815 1307 20 7 13 chr17 30200538 30200687 -65071964 + B1_Mus1 SINE Alu 1 148 0 5 815 390 57 0 0 chr17 30200693 30200746 -65071905 + (GA)n Simple_repeat Simple_repeat 1 53 0 5 815 223 281 135 12 chr17 30200928 30201043 -65071608 - MIRc SINE MIR -122 146 20 5 815 593 173 8 0 chr17 30203577 30203704 -65068947 + (TA)n Simple_repeat Simple_repeat 1 128 0 5 815 396 253 42 52 chr17 30203854 30203947 -65068704 + B1_Mur2 SINE Alu 40 131 -18 5 815 638 164 10 0 chr17 30203947 30204051 -65068600 + MTD LTR MaLR 1 105 -314 5 815 444 308 30 25 chr17 30204522 30204725 -65067926 - Lx8 LINE L1 -143 7330 7127 5 815 344 248 62 44 chr17 30204750 30204910 -65067741 - L1MEc LINE L1 -5566 834 672 5 815 3322 28 0 0 chr17 30205122 30205479 -65067172 - IAPEY2_LTR LTR ERVK 0 357 1 5 815 346 302 48 40 chr17 30205770 30205894 -65066757 + B4A SINE B4 133 257 -35 5 815 952 234 64 0 chr17 30206909 30207097 -65065554 + B3 SINE B2 2 201 -15 5 815 340 240 94 47 chr17 30207111 30207238 -65065413 - MER5A DNA MER1_type -56 133 1 5 815 23 0 0 0 chr17 30207650 30207673 -65064978 + AT_rich Low_complexity Low_complexity 1 23 0 5 815 241 196 78 0 chr17 30210016 30210067 -65062584 - PB1D7 SINE Alu -11 109 55 5 815 300 264 67 89 chr17 30211979 30212211 -65060440 - MTD LTR MaLR -150 269 22 5 815 314 270 69 20 chr17 30212211 30212313 -65060338 + Charlie5 DNA MER1_type 1 107 -2517 5 815 21 57 0 0 chr17 30213432 30213467 -65059184 + AT_rich Low_complexity Low_complexity 1 35 0 5 815 291 296 61 69 chr17 30213553 30213789 -65058862 - L1ME1 LINE L1 -235 6180 5956 5 815 1333 27 0 0 chr17 30214274 30214421 -65058230 - B1_Mm SINE Alu 0 147 1 5 815 1154 109 98 0 chr17 30214421 30214595 -65058056 - B2_Mm2 SINE B2 -3 192 2 5 815 923 283 122 60 chr17 30214743 30215499 -65057152 - L1ME1 LINE L1 -2362 3957 3155 5 815 255 346 26 0 chr17 30215727 30215805 -65056846 - Tigger7 DNA MER2_type 0 2491 2412 5 815 214 279 0 0 chr17 30215854 30215915 -65056736 + ID4_ SINE ID 6 66 -17 5 815 227 281 73 0 chr17 30216613 30216695 -65055956 - L1ME1 LINE L1 -6038 362 275 5 815 371 290 30 0 chr17 30216695 30216795 -65055856 - MER45A DNA Tip100 0 178 76 5 815 344 323 68 46 chr17 30216843 30217080 -65055571 - L1ME1 LINE L1 -6119 281 40 5 815 495 0 0 0 chr17 30217831 30217886 -65054765 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 815 276 149 0 0 chr17 30218846 30218893 -65053758 + (T)n Simple_repeat Simple_repeat 1 47 0 5 815 296 352 0 23 chr17 30218913 30219041 -65053610 - Looper DNA PiggyBac -606 952 828 5 815 801 314 131 38 chr17 30219083 30219531 -65053120 - Looper DNA PiggyBac -913 645 175 5 815 1926 148 97 23 chr17 30219531 30219883 -65052768 - ORR1C1 LTR MaLR 0 378 1 5 815 801 314 131 38 chr17 30219883 30220016 -65052635 - Looper DNA PiggyBac -1384 174 10 5 815 256 304 51 125 chr17 30220120 30220647 -65052004 - L1M3e LINE L1 -5619 1411 924 5 815 25 0 0 0 chr17 30222247 30222272 -65050379 + AT_rich Low_complexity Low_complexity 1 25 0 5 815 21 0 0 0 chr17 30222342 30222363 -65050288 + AT_rich Low_complexity Low_complexity 1 21 0 5 815 376 210 120 6 chr17 30222565 30222698 -65049953 - B2_Mm1t SINE B2 -40 176 21 5 815 572 263 45 8 chr17 30224066 30224200 -65048451 - B3 SINE B2 -21 195 57 5 815 1343 130 5 0 chr17 30224665 30224857 -65047794 + B2_Mm1t SINE B2 1 193 0 5 815 1373 71 16 11 chr17 30225201 30225387 -65047264 - B2_Mm2 SINE B2 -8 187 1 5 815 234 229 35 35 chr17 30225429 30225515 -65047136 - Lx5 LINE L1 -46 7004 6919 5 815 1614 190 39 26 chr17 30225559 30225867 -65046784 - Lx5 LINE L1 -150 6900 6589 5 815 970 91 12 18 chr17 30225951 30226119 -65046532 + (TTTC)n Simple_repeat Simple_repeat 4 170 0 5 815 612 0 0 0 chr17 30226128 30226196 -65046455 + (TTCC)n Simple_repeat Simple_repeat 4 71 0 5 815 1141 69 7 0 chr17 30226197 30226342 -65046309 - B1_Mus2 SINE Alu -1 146 1 5 815 24 0 0 0 chr17 30226665 30226689 -65045962 + AT_rich Low_complexity Low_complexity 1 24 0 5 815 1153 56 0 14 chr17 30226706 30226852 -65045799 - B1_Mus1 SINE Alu 0 148 5 5 815 251 206 63 0 chr17 30227103 30227166 -65045485 - PB1D10 SINE Alu -8 109 43 5 815 272 104 42 0 chr17 30227724 30227772 -65044879 + (AGGGGG)n Simple_repeat Simple_repeat 4 53 0 5 815 189 231 0 19 chr17 30227906 30227959 -65044692 + L2a LINE L2 3375 3426 0 5 815 1291 295 131 33 chr17 30228137 30228985 -65043666 + L1MC3 LINE L1 5658 6588 -1197 5 815 561 13 0 37 chr17 30229078 30229159 -65043492 + (TCCCC)n Simple_repeat Simple_repeat 2 79 0 5 815 392 258 144 28 chr17 30229402 30229613 -65043038 + L1MC3 LINE L1 6646 6875 -910 5 815 319 263 121 21 chr17 30229748 30229888 -65042763 + L1MC3 LINE L1 7076 7229 -556 5 815 1294 232 32 41 chr17 30229900 30230241 -65042410 - ORR1C1 LTR MaLR -40 338 1 5 815 239 232 213 26 chr17 30230489 30230644 -65042007 + L1MC3 LINE L1 7595 7778 -7 5 815 729 0 0 0 chr17 30230705 30230786 -65041865 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 5 815 1099 58 14 0 chr17 30230789 30230927 -65041724 - B1_Mus1 SINE Alu -7 141 2 5 815 21 0 0 0 chr17 30230928 30230949 -65041702 + AT_rich Low_complexity Low_complexity 1 21 0 5 815 1276 20 0 0 chr17 30230954 30231101 -65041550 - B1_Mus2 SINE Alu 0 147 1 5 815 779 168 14 0 chr17 30231140 30231283 -65041368 + ORR1D1 LTR MaLR 1 145 -229 5 815 243 288 55 0 chr17 30232608 30232681 -65039970 - Tigger7 DNA MER2_type -2200 291 215 5 815 450 307 58 24 chr17 30232703 30232779 -65039872 - MER2 DNA MER2_type -47 298 225 5 815 5793 121 46 94 chr17 30232779 30233854 -65038797 - RLTR13D5 LTR ERVK 0 1023 1 5 815 450 307 58 24 chr17 30233854 30233984 -65038667 - MER2 DNA MER2_type -121 224 85 5 815 375 83 0 0 chr17 30233995 30234055 -65038596 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 815 485 266 57 7 chr17 30234059 30234199 -65038452 - B3A SINE B2 -51 147 1 5 815 459 0 0 0 chr17 30235239 30235290 -65037361 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 815 22 0 0 0 chr17 30236372 30236394 -65036257 + AT_rich Low_complexity Low_complexity 1 22 0 5 815 21 0 0 0 chr17 30237665 30237686 -65034965 + AT_rich Low_complexity Low_complexity 1 21 0 5 815 313 115 0 60 chr17 30238051 30238134 -65034517 + CT-rich Low_complexity Low_complexity 4 81 0 5 815 468 0 0 0 chr17 30238507 30238559 -65034092 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 815 790 79 16 1 chr17 30239914 30240053 -65032598 - B1_Mus1 SINE Alu 0 150 2 5 815 238 233 0 0 chr17 30241150 30241193 -65031458 - B3A SINE B2 -142 56 14 5 815 488 233 17 33 chr17 30241285 30241405 -65031246 + PB1D9 SINE Alu 1 118 -2 5 815 258 81 0 0 chr17 30241407 30241444 -65031207 + (A)n Simple_repeat Simple_repeat 1 37 0 5 815 1988 111 100 0 chr17 30241602 30241953 -65030698 - ORR1B1 LTR MaLR -8 386 1 5 815 303 302 25 17 chr17 30243495 30243613 -65029038 + L1M5 LINE L1 5376 5494 -746 5 815 181 276 75 65 chr17 30244245 30244338 -65028313 + MIRb SINE MIR 10 103 -165 5 815 687 141 103 7 chr17 30244548 30244684 -65027967 + B1_Mur4 SINE Alu 1 149 -1 5 815 1095 206 267 52 chr17 30244924 30245170 -65027481 + MTD LTR MaLR 1 297 -122 5 815 1435 88 16 0 chr17 30245170 30245362 -65027289 - B2_Mm2 SINE B2 0 195 1 5 815 1095 211 82 66 chr17 30245362 30245478 -65027173 + MTD LTR MaLR 298 418 -1 5 815 607 174 121 14 chr17 30245695 30245835 -65026816 - B3A SINE B2 -36 162 8 5 815 30 59 0 0 chr17 30246588 30246639 -65026012 + AT_rich Low_complexity Low_complexity 1 51 0 5 815 504 0 0 0 chr17 30246649 30246705 -65025946 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 5 815 698 89 205 0 chr17 30246705 30246817 -65025834 - B1_Mus1 SINE Alu -12 136 2 5 815 216 0 0 0 chr17 30248874 30248898 -65023753 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 5 815 275 245 82 70 chr17 30248937 30249095 -65023556 + MER5A1 DNA MER1_type 7 166 0 5 815 225 217 0 21 chr17 30249341 30249388 -65023263 - MIRb SINE MIR -8 260 215 5 815 557 330 21 71 chr17 30249459 30249697 -65022954 - B4 SINE B4 -60 232 7 5 815 306 266 110 0 chr17 30250321 30250430 -65022221 + L1MA8 LINE L1 6166 6286 -5 6 815 1275 220 47 18 chr17 30250855 30251133 -65021518 - Lx9 LINE L1 -1049 6595 6310 6 815 771 201 0 14 chr17 30252157 30252298 -65020353 - B1_Mur1 SINE Alu -8 141 3 6 815 1635 163 28 41 chr17 30252961 30253325 -65019326 - ORR1B1 LTR MaLR -8 386 25 6 815 269 262 146 27 chr17 30255556 30255666 -65016985 + L1M4b LINE L1 40 162 -7172 6 815 1307 87 27 0 chr17 30255678 30255861 -65016790 + B2_Mm2 SINE B2 2 189 -6 6 815 885 68 0 0 chr17 30256273 30256390 -65016261 + (TC)n Simple_repeat Simple_repeat 2 118 0 6 815 894 205 113 0 chr17 30256970 30257155 -65015496 - B3 SINE B2 -10 206 1 6 815 317 141 167 9 chr17 30257471 30257565 -65015086 + B1_Mur1 SINE Alu 6 140 -9 6 815 814 178 20 0 chr17 30258977 30259123 -65013528 - B1_Mur3 SINE Alu 0 149 1 6 815 370 290 144 30 chr17 30259978 30260135 -65012516 - L1MB2 LINE L1 -108 6063 5897 6 815 189 0 0 0 chr17 30260135 30260156 -65012495 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 815 370 290 144 30 chr17 30260156 30260297 -65012354 - L1MB2 LINE L1 -275 5896 5732 6 815 281 287 148 0 chr17 30260422 30260523 -65012128 - B3 SINE B2 -100 116 1 6 815 378 0 0 0 chr17 30261328 30261370 -65011281 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 815 360 0 0 0 chr17 30261713 30261753 -65010898 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 815 913 101 43 7 chr17 30262097 30262236 -65010415 - B1_Mur3 SINE Alu -1 148 5 6 815 239 79 26 0 chr17 30262462 30262500 -65010151 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6 815 180 77 0 0 chr17 30263158 30263184 -65009467 + (CTCA)n Simple_repeat Simple_repeat 1 26 0 6 815 1760 214 168 26 chr17 30263561 30264243 -65008408 - Lx9 LINE L1 -8 7636 6858 6 815 247 309 50 20 chr17 30264245 30264344 -65008307 + MLT1I LTR MaLR 106 207 -204 6 815 258 358 45 45 chr17 30264876 30265031 -65007620 - MIRb SINE MIR -82 186 32 6 815 21 0 0 0 chr17 30265270 30265291 -65007360 + AT_rich Low_complexity Low_complexity 1 21 0 6 815 339 302 93 9 chr17 30265751 30265858 -65006793 + B1F SINE Alu 2 117 -32 6 815 21 36 0 0 chr17 30266827 30266855 -65005796 + AT_rich Low_complexity Low_complexity 1 28 0 6 815 446 326 29 7 chr17 30267374 30267510 -65005141 - RSINE1 SINE B4 -19 146 8 6 815 186 254 15 31 chr17 30267828 30267893 -65004758 - L2 LINE L2 -807 2612 2549 6 815 525 83 0 0 chr17 30268329 30268413 -65004238 + (TCTCTG)n Simple_repeat Simple_repeat 2 85 0 6 815 605 234 34 67 chr17 30269573 30269752 -65002899 - B3 SINE B2 0 216 44 6 815 213 94 0 0 chr17 30269815 30269847 -65002804 + (GGGA)n Simple_repeat Simple_repeat 2 33 0 6 815 405 0 0 0 chr17 30270228 30270273 -65002378 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 6 815 1123 86 0 0 chr17 30271136 30271276 -65001375 - B1_Mus2 SINE Alu -6 141 2 6 815 1005 129 0 14 chr17 30271415 30271557 -65001094 + LSU-rRNA_Hsa rRNA rRNA 4894 5033 -2 6 815 207 200 20 20 chr17 30272630 30272681 -64999970 - MER5B DNA MER1_type 0 178 128 6 815 301 206 160 30 chr17 30272712 30272812 -64999839 - RSINE1 SINE B4 -6 159 47 6 815 538 261 92 20 chr17 30274199 30274291 -64998360 - L1M3 LINE L1 -1944 4196 4088 6 815 201 39 0 0 chr17 30274291 30274317 -64998334 + (AGTAG)n Simple_repeat Simple_repeat 4 29 0 6 815 538 256 132 133 chr17 30274317 30275354 -64997297 - L1M3 LINE L1 -2053 4090 3071 6 815 1265 185 273 9 chr17 30275428 30275761 -64996890 + MTC LTR MaLR 1 421 0 6 816 1073 73 0 7 chr17 30278153 30278290 -64994361 - B1_Mus1 SINE Alu -11 137 2 6 816 409 102 143 33 chr17 30278383 30278474 -64994177 - B2_Mm2 SINE B2 -94 101 1 6 816 980 84 156 0 chr17 30278488 30278642 -64994009 - B2_Mm1t SINE B2 -14 179 2 6 816 386 279 135 7 chr17 30278644 30278785 -64993866 + Tigger7 DNA MER2_type 2332 2490 -1 6 816 213 108 0 0 chr17 30278928 30278965 -64993686 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 816 332 318 41 107 chr17 30279034 30279204 -64993447 - B4A SINE B4 -13 279 119 6 816 3170 31 65 0 chr17 30279204 30279590 -64993061 - IAPLTR2a LTR ERVK 0 411 1 6 816 332 318 41 107 chr17 30279590 30279662 -64992989 - B4A SINE B4 -174 118 54 6 816 206 105 0 26 chr17 30279705 30279744 -64992907 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 6 816 745 172 31 0 chr17 30280608 30280736 -64991915 + B1_Mur4 SINE Alu 5 136 -14 6 816 926 211 28 28 chr17 30282016 30282230 -64990421 - B3 SINE B2 0 216 3 6 816 216 0 0 0 chr17 30283166 30283190 -64989461 + (CAA)n Simple_repeat Simple_repeat 2 25 0 6 816 1181 150 50 0 chr17 30284700 30284900 -64987751 + URR1B DNA MER1_type 1 210 -15 6 816 417 286 0 0 chr17 30285356 30285461 -64987190 - PB1D10 SINE Alu -2 115 11 6 816 1938 166 55 8 chr17 30285498 30285899 -64986752 - MTC LTR MaLR -1 420 1 6 816 726 173 15 8 chr17 30286651 30286785 -64985866 + B1_Mur3 SINE Alu 2 136 -13 6 816 306 0 0 0 chr17 30286785 30286819 -64985832 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 6 816 377 213 340 25 chr17 30287492 30287529 -64985122 - B3 SINE B2 -7 209 166 6 816 501 17 0 0 chr17 30287529 30287587 -64985064 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 6 816 377 213 340 25 chr17 30287587 30287708 -64984943 - B3 SINE B2 -51 165 1 6 816 1352 219 72 9 chr17 30287802 30288120 -64984531 - MTD LTR MaLR -72 347 10 6 816 205 191 0 0 chr17 30288347 30288389 -64984262 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 6 816 2157 289 129 74 chr17 30292043 30292944 -64979707 - MTE-int LTR MaLR -42 1538 554 6 816 736 174 72 0 chr17 30292944 30293082 -64979569 - B1_Mur4 SINE Alu 0 150 3 6 816 2157 289 129 74 chr17 30293082 30293586 -64979065 - MTE-int LTR MaLR -1027 553 55 6 816 356 320 83 16 chr17 30293570 30293884 -64978767 - ORR1E LTR MaLR -24 335 1 6 816 251 274 98 0 chr17 30294736 30294838 -64977813 + PB1D7 SINE Alu 2 113 -7 6 816 189 0 0 0 chr17 30295216 30295237 -64977414 + (TGG)n Simple_repeat Simple_repeat 3 23 0 6 816 539 263 59 0 chr17 30295456 30295608 -64977043 - B3 SINE B2 -9 207 47 6 816 207 133 0 0 chr17 30296222 30296267 -64976384 + (T)n Simple_repeat Simple_repeat 1 45 0 6 816 444 217 206 15 chr17 30296278 30296409 -64976242 - MTD LTR MaLR -44 375 220 6 816 204 203 29 59 chr17 30296736 30296804 -64975847 + CT-rich Low_complexity Low_complexity 1 66 0 6 816 1185 30 0 0 chr17 30298546 30298681 -64973970 + B1_Mm SINE Alu 2 136 -11 6 816 516 211 19 0 chr17 30298958 30299062 -64973589 + B3A SINE B2 3 108 -90 6 816 180 0 0 0 chr17 30299280 30299300 -64973351 + (CGGG)n Simple_repeat Simple_repeat 3 22 0 6 816 1099 94 0 26 chr17 30299799 30299952 -64972699 + B1_Mur3 SINE Alu 1 149 0 6 816 1000 162 126 5 chr17 30300202 30300401 -64972250 + URR1A DNA MER1_type 4 226 0 6 816 1699 182 82 73 chr17 30301609 30302048 -64970603 - RMER1B Other Other -1 1065 623 6 816 319 318 66 61 chr17 30302237 30302465 -64970186 - HAL1 LINE L1 -940 1567 1339 6 816 321 155 0 37 chr17 30303007 30303082 -64969569 + B3A SINE B2 1 68 -125 6 816 225 0 0 0 chr17 30304040 30304065 -64968586 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 6 816 1026 81 22 0 chr17 30304065 30304201 -64968450 - B1_Mus1 SINE Alu -9 139 1 6 816 333 0 0 0 chr17 30304531 30304568 -64968083 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 6 816 5547 172 106 43 chr17 30304586 30305770 -64966881 - MYSERV6-int LTR ERVK -7700 1259 2 6 816 310 171 63 38 chr17 30305772 30305851 -64966800 - RMER6B LTR ERVK -2 459 379 6 816 2292 172 64 56 chr17 30305851 30306318 -64966333 - MYSERV6-int LTR ERVK -3248 5711 5241 6 816 1350 182 31 27 chr17 30306347 30306640 -64966011 - RLTR20B3 LTR ERVK -283 294 1 6 816 558 179 102 143 chr17 30306641 30306837 -64965814 - MYSERV6-int LTR ERVK -3713 5246 5059 6 816 37797 55 3 9 chr17 30306859 30313056 -64959595 - L1Md_F3 LINE L1 -1 6583 481 6 816 4281 119 55 71 chr17 30313080 30313858 -64958793 - MYSERV6-int LTR ERVK -4100 4859 4094 6 816 1739 124 176 19 chr17 30313853 30314336 -64958315 - MYSERV6-int LTR ERVK -7162 1797 1239 6 816 791 113 15 0 chr17 30315896 30316029 -64956622 + (TTTTC)n Simple_repeat Simple_repeat 1 135 0 6 816 2552 137 19 2 chr17 30316039 30316457 -64956194 - L1_Mur2 LINE L1 -1592 4285 3861 6 816 340 318 65 48 chr17 30316816 30317110 -64955541 - L1MC4 LINE L1 0 8042 7744 6 816 214 171 0 24 chr17 30317776 30317818 -64954833 + CT-rich Low_complexity Low_complexity 2 42 0 6 816 933 121 32 6 chr17 30317938 30318091 -64954560 + B2_Mm1t SINE B2 1 158 -35 6 816 306 0 0 0 chr17 30318091 30318125 -64954526 + (TAA)n Simple_repeat Simple_repeat 3 36 0 6 816 426 39 0 0 chr17 30318840 30318892 -64953759 + (TCC)n Simple_repeat Simple_repeat 3 54 0 6 816 275 239 0 0 chr17 30318896 30318964 -64953687 - ID_B1 SINE B4 -149 143 76 6 816 1096 215 5 5 chr17 30318992 30319198 -64953453 - B3 SINE B2 -8 208 3 6 816 488 286 220 0 chr17 30319217 30319385 -64953266 - ID_B1 SINE B4 -16 208 4 6 816 703 104 0 0 chr17 30319490 30319596 -64953055 + B2_Mm2 SINE B2 2 107 -88 6 816 199 269 125 31 chr17 30320767 30320863 -64951788 + MIR SINE MIR 112 216 -46 6 816 717 230 7 33 chr17 30320989 30321142 -64951509 + B1_Mur1 SINE Alu 1 149 0 6 816 239 204 148 0 chr17 30321485 30321539 -64951112 + L1MD2 LINE L1 6258 6319 -40 6 816 1374 85 26 11 chr17 30321551 30321742 -64950909 - B2_Mm2 SINE B2 0 195 2 6 816 1512 140 93 4 chr17 30321747 30322026 -64950625 - RMER19B LTR ERVK -7 895 592 6 816 957 52 0 22 chr17 30322277 30322414 -64950237 - B1_Mus1 SINE Alu 0 148 15 6 816 5861 85 20 20 chr17 30322618 30323461 -64949190 + L1_Mus4 LINE L1 5784 6626 -10 6 816 831 208 28 11 chr17 30326628 30326808 -64945843 + URR1A DNA MER1_type 1 183 -43 6 816 493 218 10 5 chr17 30327565 30327679 -64944972 - B1_Mur1 SINE Alu -1 147 36 7 816 393 233 11 21 chr17 30327692 30327809 -64944842 + B3 SINE B2 5 119 -79 7 816 351 104 25 38 chr17 30327842 30327922 -64944729 + CT-rich Low_complexity Low_complexity 1 79 0 7 816 519 60 0 0 chr17 30333047 30333114 -64939537 + (TG)n Simple_repeat Simple_repeat 1 67 0 7 816 761 184 43 0 chr17 30333573 30333714 -64938937 + B1_Mur2 SINE Alu 2 148 -1 7 816 432 0 0 0 chr17 30333868 30333916 -64938735 + (TCCC)n Simple_repeat Simple_repeat 1 48 0 7 816 254 309 0 10 chr17 30333917 30334015 -64938636 - L1MD3 LINE L1 -994 7001 6905 7 816 317 226 112 42 chr17 30335284 30335427 -64937224 - L1ME1 LINE L1 -186 5993 5841 7 816 231 146 0 0 chr17 30335783 30335824 -64936827 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 816 575 197 76 8 chr17 30337217 30337335 -64935316 - B1_Mus1 SINE Alu -11 137 12 7 816 405 256 31 69 chr17 30337234 30337364 -64935287 - MT2B LTR ERVL -335 266 142 7 816 269 197 32 32 chr17 30338856 30338919 -64933732 - L2 LINE L2 -565 2854 2792 7 816 243 0 0 0 chr17 30340922 30340949 -64931702 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 816 346 256 197 23 chr17 30341026 30341158 -64931493 - ID_B1 SINE B4 -8 216 62 7 816 1390 86 32 0 chr17 30342723 30342909 -64929742 + B2_Mm1t SINE B2 2 193 0 7 816 580 37 12 0 chr17 30344474 30344644 -64928007 - L1Md_F2 LINE L1 0 6582 6501 7 816 24 0 0 0 chr17 30348612 30348636 -64924015 + AT_rich Low_complexity Low_complexity 1 24 0 7 816 1693 27 0 0 chr17 30348657 30348845 -64923806 - B2_Mm1t SINE B2 -5 188 1 7 816 441 319 95 21 chr17 30350305 30350590 -64922061 + L1MA4A LINE L1 5702 6007 -296 7 816 415 233 278 0 chr17 30350598 30350778 -64921873 - ORR1C2-int LTR MaLR -936 434 205 7 816 287 191 127 0 chr17 30350793 30350856 -64921795 - ORR1C2-int LTR MaLR -1892 71 1 7 816 1050 143 180 25 chr17 30350856 30351097 -64921554 - ORR1C2 LTR MaLR -17 367 89 7 816 347 355 18 0 chr17 30355783 30355893 -64916758 + PB1D7 SINE Alu 7 118 -2 7 816 285 98 0 0 chr17 30357000 30357041 -64915610 + (TTC)n Simple_repeat Simple_repeat 2 42 0 7 816 228 246 169 0 chr17 30357785 30357850 -64914801 - B3A SINE B2 -122 76 1 7 816 276 368 0 26 chr17 30357991 30358010 -64914641 + ID SINE ID 63 78 -146 7 816 292 302 0 30 chr17 30358010 30358109 -64914542 + PB1D10 SINE Alu 1 96 -21 7 816 546 16 0 0 chr17 30358474 30358537 -64914114 + (GA)n Simple_repeat Simple_repeat 2 64 0 7 816 206 176 0 19 chr17 30360306 30360358 -64912293 + GA-rich Low_complexity Low_complexity 6 56 0 7 816 788 194 29 0 chr17 30360634 30360811 -64911840 - ORR1C2 LTR MaLR -234 150 1 7 816 570 233 17 0 chr17 30360867 30360983 -64911668 - ID_B1 SINE B4 -12 212 95 7 816 293 287 88 10 chr17 30361216 30361318 -64911333 + MTEa LTR MaLR 28 137 -242 7 816 333 362 59 20 chr17 30364089 30364241 -64908410 + MLT1A LTR MaLR 4 161 -213 7 816 443 332 24 10 chr17 30364842 30365049 -64907602 - Charlie21a DNA MER1_type -530 683 474 7 816 753 250 66 66 chr17 30366499 30366786 -64905865 - B4A SINE B4 -2 290 4 7 816 1434 154 258 5 chr17 30368394 30368766 -64903885 + RMER15 LTR ERVL 34 499 -76 7 816 305 174 19 196 chr17 30368811 30368882 -64903769 + L1M4b LINE L1 2164 2218 -5116 7 816 1220 61 0 0 chr17 30368882 30369030 -64903621 + B1_Mus1 SINE Alu 1 148 0 7 816 305 174 19 196 chr17 30369030 30369065 -64903586 + L1M4b LINE L1 2219 2251 -5083 7 816 378 0 0 0 chr17 30369255 30369297 -64903354 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 816 246 323 127 39 chr17 30369855 30370287 -64902364 + HAL1 LINE L1 712 1181 -1326 7 816 383 0 0 21 chr17 30370338 30370386 -64902265 + (CAGG)n Simple_repeat Simple_repeat 2 48 0 7 816 716 253 46 5 chr17 30371128 30371323 -64901328 - B3 SINE B2 -11 205 3 7 816 278 248 27 90 chr17 30372764 30372875 -64899776 + Charlie8 DNA MER1_type 61 164 -2264 7 816 321 26 0 0 chr17 30373019 30373057 -64899594 + (GA)n Simple_repeat Simple_repeat 2 39 0 7 816 215 31 0 30 chr17 30373255 30373288 -64899363 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 816 399 21 0 0 chr17 30373678 30373726 -64898925 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 816 784 287 79 8 chr17 30374664 30374931 -64897720 + B4 SINE B4 1 286 -6 7 816 1184 133 138 0 chr17 30375187 30375382 -64897269 - URR1B DNA MER1_type -3 222 1 7 816 189 0 0 0 chr17 30380305 30380326 -64892325 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 7 816 246 278 56 0 chr17 30380327 30380399 -64892252 - MER58C DNA MER1_type -114 101 26 7 816 409 270 10 0 chr17 30380478 30380578 -64892073 - PB1D10 SINE Alu -3 114 14 7 816 272 242 48 0 chr17 30383767 30383829 -64888822 + B1F2 SINE Alu 16 80 -69 7 816 503 318 178 13 chr17 30386174 30386515 -64886136 + L1MA7 LINE L1 5845 6252 -48 7 816 1275 41 0 0 chr17 30386709 30386856 -64885795 - B1_Mus2 SINE Alu 0 147 1 7 816 357 75 0 0 chr17 30386954 30387007 -64885644 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 816 309 212 141 0 chr17 30387940 30388025 -64884626 + L1MC1 LINE L1 6237 6333 0 7 816 511 266 34 40 chr17 30388047 30388196 -64884455 - B1F2 SINE Alu -1 148 1 7 816 841 279 79 48 chr17 30388521 30388875 -64883776 - L3 LINE CR1 -608 3881 3517 7 816 228 231 23 114 chr17 30389082 30389170 -64883481 + ID4 SINE ID 2 81 -2 7 816 1353 90 26 11 chr17 30389446 30389637 -64883014 - B2_Mm2 SINE B2 -1 194 1 7 816 1678 191 54 89 chr17 30389717 30389901 -64882750 + MTC LTR MaLR 11 208 -213 7 816 988 54 100 0 chr17 30389901 30390031 -64882620 + B1_Mus2 SINE Alu 5 147 0 7 816 1678 191 54 89 chr17 30390031 30390272 -64882379 + MTC LTR MaLR 209 421 0 7 816 217 119 71 0 chr17 30391597 30391639 -64881012 + G-rich Low_complexity Low_complexity 3 47 0 7 816 432 0 0 0 chr17 30392201 30392249 -64880402 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 816 180 262 0 0 chr17 30393145 30393187 -64879464 - L3 LINE CR1 -3055 1434 1393 7 816 229 349 0 0 chr17 30394963 30395046 -64877605 - MIR SINE MIR -120 142 60 7 816 279 227 122 22 chr17 30395870 30395960 -64876691 + B3 SINE B2 117 215 -1 7 816 539 29 0 14 chr17 30396831 30396901 -64875750 + (TATG)n Simple_repeat Simple_repeat 3 71 0 7 816 1203 247 51 32 chr17 30396926 30397240 -64875411 + ORR1E LTR MaLR 28 347 -12 7 816 1238 41 7 0 chr17 30397390 30397535 -64875116 - B1_Mus2 SINE Alu 0 147 2 7 816 207 0 0 0 chr17 30400791 30400814 -64871837 + (T)n Simple_repeat Simple_repeat 1 23 0 7 816 552 179 74 19 chr17 30400832 30400940 -64871711 + PB1D9 SINE Alu 5 118 -2 7 816 1224 68 0 0 chr17 30401153 30401300 -64871351 - B1_Mus2 SINE Alu 0 147 1 7 816 25 31 0 0 chr17 30402613 30402645 -64870006 + AT_rich Low_complexity Low_complexity 1 32 0 7 816 938 235 30 0 chr17 30403913 30404113 -64868538 + B3 SINE B2 2 207 -9 7 816 412 314 56 8 chr17 30405382 30405507 -64867144 + B1F2 SINE Alu 1 131 -18 7 816 412 316 161 14 chr17 30406424 30406716 -64865935 + LTR87 LTR ERVL? 286 620 -4 7 816 1213 48 14 0 chr17 30407148 30407293 -64865358 - B1_Mus1 SINE Alu 0 148 2 7 12 1101 149 0 27 chr17 30408524 30408710 -64863941 + B2_Mm2 SINE B2 1 181 -14 7 817 1017 40 16 0 chr17 30409013 30409138 -64863513 + B2_Mm2 SINE B2 2 128 -67 7 817 306 145 48 0 chr17 30409284 30409346 -64863305 + B2_Mm2 SINE B2 125 189 -6 7 817 1123 132 26 0 chr17 30410231 30410421 -64862230 + B2_Mm2 SINE B2 1 195 0 7 817 776 304 105 23 chr17 30410425 30410910 -64861741 + L1MB7 LINE L1 5616 6140 -44 7 817 270 333 12 25 chr17 30412385 30412545 -64860106 + (CATATA)n Simple_repeat Simple_repeat 1 158 0 7 817 287 311 47 7 chr17 30412545 30412653 -64859998 - PB1D10 SINE Alu -7 113 2 7 817 303 49 0 0 chr17 30412730 30412771 -64859880 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 7 817 1236 49 0 0 chr17 30412771 30412915 -64859736 - B1_Mm SINE Alu -3 144 1 7 817 351 365 93 5 chr17 30413096 30413300 -64859351 + L1ME3 LINE L1 5907 6128 -34 7 817 434 167 274 0 chr17 30413536 30413638 -64859013 - B1_Mur4 SINE Alu -19 131 2 7 817 383 240 23 53 chr17 30414204 30414336 -64858315 - ID_B1 SINE B4 -2 222 95 7 817 1000 78 14 7 chr17 30414527 30414669 -64857982 - B1_Mus2 SINE Alu 0 147 5 7 817 555 184 65 78 chr17 30414536 30414689 -64857962 - B4 SINE B4 -74 218 68 7 817 499 154 33 0 chr17 30414929 30415020 -64857631 + B1_Mus1 SINE Alu 9 102 -46 7 817 238 218 18 0 chr17 30417629 30417684 -64854967 + MLT1K LTR MaLR 521 576 -19 7 817 254 180 31 62 chr17 30418713 30418778 -64853873 - ORR1E LTR MaLR -23 356 294 7 817 615 225 35 21 chr17 30418758 30418899 -64853752 - B1_Mur2 SINE Alu -5 144 2 7 817 361 213 24 136 chr17 30418899 30418941 -64853710 - MT2B LTR ERVL -444 157 130 7 817 292 326 62 56 chr17 30418975 30419170 -64853481 - ORR1E LTR MaLR -163 196 1 7 817 245 51 0 25 chr17 30423291 30423331 -64849320 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 7 817 1042 84 42 0 chr17 30423360 30423502 -64849149 + B1_Mus1 SINE Alu 1 148 0 7 817 243 0 0 0 chr17 30423502 30423529 -64849122 + (A)n Simple_repeat Simple_repeat 1 27 0 7 817 200 133 44 0 chr17 30424301 30424346 -64848305 + GA-rich Low_complexity Low_complexity 3 49 0 7 817 678 208 35 8 chr17 30425246 30425431 -64847220 + ORR1D2 LTR MaLR 1 194 -165 7 817 951 154 63 47 chr17 30425476 30425667 -64846984 - B2_Mm2 SINE B2 0 195 2 8 817 427 162 0 0 chr17 30425670 30425738 -64846913 + ORR1D2 LTR MaLR 303 370 0 7 817 661 191 95 0 chr17 30426580 30426706 -64845945 - B1F1 SINE Alu -7 142 5 8 817 252 300 24 24 chr17 30426767 30426849 -64845802 - ID4_ SINE ID -1 82 1 8 817 391 258 43 0 chr17 30427207 30427300 -64845351 + B1F SINE Alu 1 97 -52 8 817 306 286 39 0 chr17 30427327 30427404 -64845247 + ID4_ SINE ID 3 82 -1 8 817 1172 204 19 0 chr17 30428082 30428288 -64844363 + B3 SINE B2 7 216 0 8 817 447 19 0 0 chr17 30428838 30428890 -64843761 + (CA)n Simple_repeat Simple_repeat 2 53 0 8 817 839 95 159 0 chr17 30431142 30431268 -64841383 + B2_Mm2 SINE B2 1 146 -49 8 817 410 325 123 33 chr17 30432159 30432556 -64840095 + L2a LINE L2 2993 3425 -1 8 817 1235 48 0 7 chr17 30433876 30434023 -64838628 - B1_Mus1 SINE Alu 0 148 3 8 817 1391 210 65 3 chr17 30434023 30434315 -64838336 + MTD LTR MaLR 107 416 -3 8 817 541 354 51 54 chr17 30434960 30435333 -64837318 + L3 LINE CR1 2803 3174 -1315 8 817 397 295 8 8 chr17 30435815 30435948 -64836703 + G-rich Low_complexity Low_complexity 3 135 0 8 817 213 298 0 50 chr17 30437000 30437060 -64835591 - ID4_ SINE ID -26 57 1 8 817 1165 74 0 0 chr17 30437630 30437778 -64834873 - B1_Mus1 SINE Alu 0 148 1 8 817 966 156 0 0 chr17 30440273 30440414 -64832237 - B1_Mus1 SINE Alu -7 141 1 8 817 1252 120 16 0 chr17 30440597 30440780 -64831871 - B2_Mm2 SINE B2 -9 186 1 8 817 722 190 71 41 chr17 30440781 30440799 -64831852 - B2_Mm2 SINE B2 -19 176 163 8 817 252 0 0 0 chr17 30440799 30440827 -64831824 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 8 817 722 190 71 41 chr17 30440827 30440978 -64831673 - B2_Mm2 SINE B2 -33 162 2 8 817 198 0 0 0 chr17 30440980 30441002 -64831649 + (A)n Simple_repeat Simple_repeat 1 22 0 8 817 342 0 0 0 chr17 30442789 30442827 -64829824 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 817 1104 85 0 0 chr17 30442828 30442969 -64829682 - B1_Mus2 SINE Alu -6 141 1 8 817 223 192 19 19 chr17 30444606 30444659 -64827992 + GA-rich Low_complexity Low_complexity 5 57 0 8 817 275 304 21 113 chr17 30445127 30445268 -64827383 - RMER12 LTR ERVK -480 842 715 8 817 210 37 0 0 chr17 30447092 30447119 -64825532 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 8 817 1465 65 21 0 chr17 30447224 30447410 -64825241 + B2_Mm2 SINE B2 1 190 -5 8 817 209 154 51 0 chr17 30447731 30447770 -64824881 + CT-rich Low_complexity Low_complexity 4 44 0 8 817 443 215 0 137 chr17 30447972 30448096 -64824555 + U6 snRNA snRNA 1 107 0 8 817 554 259 33 20 chr17 30450198 30450348 -64822303 + B4A SINE B4 129 280 -12 8 817 590 303 53 57 chr17 30450575 30450876 -64821775 + MLT1B LTR MaLR 89 388 -2 8 817 286 154 39 0 chr17 30451140 30451192 -64821459 - L1M5 LINE L1 -455 5669 5616 8 817 2337 178 24 5 chr17 30451192 30451605 -64821046 + MTC LTR MaLR 1 421 0 8 817 4272 219 76 53 chr17 30451605 30452835 -64819816 + MTC-int LTR MaLR 1 1258 0 8 817 942 233 14 64 chr17 30452835 30452895 -64819756 + MTC LTR MaLR 1 48 -371 8 817 1470 74 16 0 chr17 30452895 30453084 -64819567 - B2_Mm2 SINE B2 -2 193 2 8 817 942 233 14 64 chr17 30453084 30453243 -64819408 + MTC LTR MaLR 49 209 -210 8 817 283 203 0 0 chr17 30453244 30453303 -64819348 + RMER1A Other Other 362 420 -610 8 817 288 0 0 0 chr17 30453428 30453460 -64819191 + (T)n Simple_repeat Simple_repeat 1 32 0 8 817 362 317 98 36 chr17 30453819 30454012 -64818639 + L1M2 LINE L1 5102 5306 -837 8 817 867 246 14 32 chr17 30454040 30454258 -64818393 + B3 SINE B2 1 214 -2 8 817 819 271 160 2 chr17 30454378 30454777 -64817874 - L1MA7 LINE L1 -10 6281 5820 8 817 614 278 54 81 chr17 30455396 30455998 -64816653 - L1MA7 LINE L1 -758 5554 4970 8 817 461 315 68 21 chr17 30456212 30456449 -64816202 + RMER5 LTR ERV1 148 395 -139 8 817 443 324 116 23 chr17 30458068 30458501 -64814150 + L1MC LINE L1 5351 5823 -2059 8 817 691 286 162 26 chr17 30458592 30459019 -64813632 + RMER5 LTR ERV1 33 517 -17 8 817 195 42 0 0 chr17 30459619 30459643 -64813008 + (T)n Simple_repeat Simple_repeat 1 24 0 8 817 2246 86 12 60 chr17 30459751 30460086 -64812565 - ORR1A2 LTR MaLR -8 319 1 8 817 797 206 7 0 chr17 30461452 30461598 -64811053 + B1_Mus2 SINE Alu 1 147 0 8 817 550 209 163 0 chr17 30461735 30461864 -64810787 - RSINE1 SINE B4 -4 161 12 8 817 222 143 27 47 chr17 30461914 30461966 -64810685 - PB1D9 SINE Alu -9 118 63 8 817 243 0 0 0 chr17 30462049 30462076 -64810575 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 817 879 78 123 15 chr17 30462076 30462206 -64810445 - B1_Mm SINE Alu -3 144 1 8 817 3077 53 42 0 chr17 30462767 30463147 -64809504 + MTA_Mm LTR MaLR 1 396 0 8 817 468 311 7 0 chr17 30463584 30463719 -64808932 + ID_B1 SINE B4 88 223 -1 8 817 412 111 0 0 chr17 30463816 30463888 -64808763 - Lx2B LINE L1 -15 6985 6914 8 817 1355 150 112 19 chr17 30463890 30464149 -64808502 - ORR1A2 LTR MaLR -44 283 1 8 817 1013 205 214 30 chr17 30464149 30464225 -64808426 - ORR1D1 LTR MaLR -59 315 224 8 817 465 19 0 0 chr17 30464225 30464279 -64808372 + (CAGG)n Simple_repeat Simple_repeat 4 57 0 8 817 1013 205 214 30 chr17 30464279 30464468 -64808183 - ORR1D1 LTR MaLR -151 223 1 8 817 402 318 81 49 chr17 30464597 30464782 -64807869 + B3A SINE B2 2 192 -6 8 817 411 270 10 0 chr17 30465249 30465349 -64807302 - Lx8 LINE L1 -1066 6407 6307 8 817 1613 324 60 22 chr17 30465411 30466058 -64806593 + Lx8 LINE L1 6450 7121 -352 8 817 349 299 31 23 chr17 30466473 30466603 -64806048 + L1MC4 LINE L1 6748 6878 -1164 8 817 775 268 50 21 chr17 30466749 30467031 -64805620 + B4A SINE B4 3 292 0 8 817 251 296 34 25 chr17 30467109 30467227 -64805424 + L1MC4 LINE L1 6975 7093 -868 8 817 253 274 66 41 chr17 30467902 30467962 -64804689 + L1MC4 LINE L1 7727 7786 -175 8 817 535 177 287 18 chr17 30467962 30468129 -64804522 + B3 SINE B2 1 212 -4 8 817 253 274 66 41 chr17 30468129 30468190 -64804461 + L1MC4 LINE L1 7787 7851 -110 8 817 252 0 0 0 chr17 30468513 30468541 -64804110 + (CAG)n Simple_repeat Simple_repeat 2 29 0 8 817 216 0 0 0 chr17 30473613 30473637 -64799014 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 817 1202 42 7 0 chr17 30474320 30474464 -64798187 + B1_Mm SINE Alu 2 146 -1 8 817 186 71 0 0 chr17 30474465 30474493 -64798158 + (A)n Simple_repeat Simple_repeat 1 28 0 8 817 807 253 144 0 chr17 30474588 30474817 -64797834 + Lx8 LINE L1 6318 6579 -894 8 817 490 82 110 66 chr17 30474822 30474913 -64797738 + RMER4A LTR ERVK 356 450 -16 8 817 515 281 97 0 chr17 30475036 30475232 -64797419 + Lx8 LINE L1 6892 7106 -367 8 817 5110 45 5 20 chr17 30475422 30476055 -64796596 + L1Md_F2 LINE L1 5959 6581 -1 8 817 1181 76 0 0 chr17 30476066 30476210 -64796441 + B1_Mus2 SINE Alu 2 145 -2 8 817 237 33 0 0 chr17 30476210 30476240 -64796411 + (CAA)n Simple_repeat Simple_repeat 2 31 0 8 817 1043 68 0 51 chr17 30476515 30476671 -64795980 + B1_Mus1 SINE Alu 1 148 0 8 817 21 36 0 0 chr17 30478310 30478338 -64794313 + AT_rich Low_complexity Low_complexity 1 28 0 8 817 330 267 192 0 chr17 30478805 30478925 -64793726 - L2a LINE L2 -21 3405 3263 8 817 366 204 40 20 chr17 30480023 30480123 -64792528 + PB1D9 SINE Alu 12 113 -7 8 817 794 247 153 23 chr17 30481565 30481917 -64790734 - HAL1 LINE L1 -1 2506 2109 8 817 381 256 51 27 chr17 30481947 30482073 -64790578 - PB1D9 SINE Alu -12 136 10 8 817 311 293 0 20 chr17 30482306 30482407 -64790244 - HAL1 LINE L1 -760 1747 1649 8 817 239 211 27 144 chr17 30483062 30483173 -64789478 - HAL1 LINE L1 -1808 699 602 8 817 209 205 0 0 chr17 30483207 30483246 -64789405 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 817 210 312 111 8 chr17 30485799 30485925 -64786726 + MIR SINE MIR 117 255 -7 8 817 180 289 19 37 chr17 30486591 30486645 -64786006 + MER5A DNA MER1_type 17 69 -120 8 817 934 206 0 0 chr17 30486730 30486890 -64785761 + URR1B DNA MER1_type 1 160 -65 8 817 672 174 96 22 chr17 30487575 30487710 -64784941 + B1_Mur1 SINE Alu 2 146 -3 8 817 677 289 60 22 chr17 30488259 30488528 -64784123 + B4A SINE B4 2 280 -12 8 817 596 256 31 6 chr17 30489591 30489752 -64782899 - Lx7 LINE L1 0 7696 7532 8 817 3888 161 81 40 chr17 30489771 30490572 -64782079 - Lx7 LINE L1 -356 7340 6507 8 817 2771 166 101 5 chr17 30490578 30491135 -64781516 + Lx7 LINE L1 5214 5823 -57 8 817 603 175 56 48 chr17 30491135 30491261 -64781390 + Lx7 LINE L1 6369 6495 -1201 8 817 248 361 36 27 chr17 30491810 30491921 -64780730 - PB1 SINE Alu -10 117 6 8 817 184 91 0 43 chr17 30491929 30491975 -64780676 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 8 817 817 231 27 32 chr17 30492259 30492447 -64780204 - B3 SINE B2 0 216 30 8 817 354 222 74 0 chr17 30492432 30492513 -64780138 - B2_Mm2 SINE B2 -107 88 2 8 817 351 0 0 0 chr17 30493117 30493156 -64779495 + (CA)n Simple_repeat Simple_repeat 1 39 0 8 817 434 306 32 16 chr17 30494919 30495045 -64777606 + B1F SINE Alu 1 128 -21 8 817 3228 34 39 0 chr17 30495663 30496044 -64776607 + MTA_Mm LTR MaLR 1 396 0 8 817 198 0 0 0 chr17 30497407 30497429 -64775222 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 8 817 826 152 53 0 chr17 30499827 30499959 -64772692 - B1_Mur3 SINE Alu -9 140 2 8 817 1061 56 0 0 chr17 30500007 30500150 -64772501 - B1_Mus1 SINE Alu 0 148 6 1 817 503 229 67 73 chr17 30500150 30500181 -64772470 - B4A SINE B4 -60 227 55 2 817 186 43 0 0 chr17 30500725 30500748 -64771903 + (T)n Simple_repeat Simple_repeat 1 23 0 3 817 288 0 0 0 chr17 30502994 30503026 -64769625 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 817 543 280 49 15 chr17 30503595 30503798 -64768853 - B3 SINE B2 -6 210 1 5 817 269 326 103 41 chr17 30503969 30504148 -64768503 + L1M5 LINE L1 3689 3894 -2252 6 817 284 0 28 0 chr17 30504148 30504184 -64768467 + (TC)n Simple_repeat Simple_repeat 1 37 0 7 817 297 68 0 0 chr17 30504184 30504227 -64768424 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 817 269 326 103 41 chr17 30504227 30504366 -64768285 + L1M5 LINE L1 3895 4027 -2119 6 817 484 294 133 25 chr17 30504736 30504977 -64767674 + MLT1A0 LTR MaLR 10 276 -89 9 817 21 0 0 0 chr17 30505051 30505072 -64767579 + AT_rich Low_complexity Low_complexity 1 21 0 1 817 519 312 35 7 chr17 30505156 30505298 -64767353 + RSINE1 SINE B4 12 157 -8 1 817 435 248 33 8 chr17 30505334 30505456 -64767195 + MLT1A1 LTR MaLR 3 127 -281 1 817 303 28 0 0 chr17 30505456 30505492 -64767159 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 817 351 221 85 19 chr17 30506640 30506746 -64765905 - PB1D10 SINE Alu 0 117 5 1 817 393 22 0 0 chr17 30507115 30507161 -64765490 + (CGTG)n Simple_repeat Simple_repeat 2 47 0 1 817 338 254 104 9 chr17 30507197 30507312 -64765339 - RSINE1 SINE B4 -15 150 25 1 817 925 148 0 32 chr17 30507612 30507766 -64764885 - B1_Mur4 SINE Alu -1 149 1 1 817 21 0 0 0 chr17 30507818 30507839 -64764812 + AT_rich Low_complexity Low_complexity 1 21 0 1 817 1022 161 15 20 chr17 30508051 30508254 -64764397 - URR1B DNA MER1_type -3 222 21 1 817 1159 62 7 0 chr17 30508872 30509018 -64763633 + B1_Mus2 SINE Alu 1 147 0 2 817 203 245 19 0 chr17 30509941 30509994 -64762657 + GA-rich Low_complexity Low_complexity 3 56 0 2 817 498 228 108 7 chr17 30512254 30512422 -64760229 - L1M4 LINE L1 -517 5662 5476 2 817 240 163 0 0 chr17 30512457 30512500 -64760151 + (TATATG)n Simple_repeat Simple_repeat 3 45 0 2 817 1153 310 68 43 chr17 30512503 30512801 -64759850 - Lx8 LINE L1 -623 6850 6557 2 817 4169 104 119 33 chr17 30512801 30513227 -64759424 - RMER6A LTR ERVK 0 756 335 2 817 432 0 0 0 chr17 30513227 30513275 -64759376 + (TC)n Simple_repeat Simple_repeat 2 49 0 2 817 4169 104 119 33 chr17 30513275 30513544 -64759107 - RMER6A LTR ERVK -422 334 3 2 817 1153 310 68 43 chr17 30513544 30513778 -64758873 - Lx8 LINE L1 -917 6556 6306 2 817 329 43 21 0 chr17 30514421 30514468 -64758183 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 817 1101 103 0 0 chr17 30514468 30514614 -64758037 - B1_Mus2 SINE Alu -1 146 1 2 817 2505 214 60 36 chr17 30515860 30516447 -64756204 + Lx7 LINE L1 6806 7406 -290 2 817 414 0 0 0 chr17 30516496 30516542 -64756109 + (GA)n Simple_repeat Simple_repeat 1 46 0 3 817 286 169 113 0 chr17 30516561 30516632 -64756019 + Lx7 LINE L1 7618 7696 0 2 817 2930 31 6 17 chr17 30517253 30517609 -64755042 - L1Md_F3 LINE L1 0 6584 6233 3 817 234 128 0 0 chr17 30518429 30518468 -64754183 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 817 488 338 28 48 chr17 30518485 30518734 -64753917 + MT2A LTR ERVL 219 462 -71 3 817 280 266 57 107 chr17 30518775 30518897 -64753754 + PB1D10 SINE Alu 2 117 0 3 817 242 297 88 0 chr17 30519110 30519201 -64753450 + MLT1A0 LTR MaLR 260 358 -7 3 817 234 182 109 0 chr17 30521496 30521551 -64751100 + MLT1J LTR MaLR 91 151 -361 3 817 272 342 0 0 chr17 30521616 30521692 -64750959 - ID4_ SINE ID -2 81 6 3 817 524 303 7 0 chr17 30522892 30523037 -64749614 - ID_B1 SINE B4 0 224 79 3 817 198 71 0 0 chr17 30523780 30523808 -64748843 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 817 443 245 28 9 chr17 30523829 30523936 -64748715 - ID_B1 SINE B4 -5 219 111 4 817 311 275 12 0 chr17 30524069 30524149 -64748502 + ID4 SINE ID 2 82 -1 4 817 366 288 97 25 chr17 30524221 30524417 -64748234 + L1M4 LINE L1 4892 5101 -1045 4 817 247 236 0 40 chr17 30524682 30524757 -64747894 + L1M4 LINE L1 5295 5366 -925 4 817 293 269 15 0 chr17 30526438 30526505 -64746146 + ID4_ SINE ID 3 70 -13 4 817 212 338 14 0 chr17 30526748 30526819 -64745832 + ID_B1 SINE B4 81 152 -72 4 817 386 252 43 71 chr17 30526960 30527101 -64745550 - B1_Mur4 SINE Alu 0 150 14 4 817 196 288 0 70 chr17 30527644 30527715 -64744936 - MIRc SINE MIR -157 111 46 4 817 376 319 32 38 chr17 30527833 30528041 -64744610 + B4A SINE B4 18 274 -18 4 817 797 165 260 6 chr17 30530084 30530261 -64742390 + URR1A DNA MER1_type 1 222 -4 4 817 1119 168 28 0 chr17 30530813 30531027 -64741624 - URR1B DNA MER1_type -5 220 1 4 817 21 0 0 0 chr17 30531533 30531554 -64741097 + AT_rich Low_complexity Low_complexity 1 21 0 5 817 299 241 128 16 chr17 30531671 30531801 -64740850 + B1_Mur1 SINE Alu 4 148 0 5 817 342 261 75 42 chr17 30531934 30532036 -64740615 - B1F SINE Alu 0 149 42 5 817 321 26 0 0 chr17 30532036 30532074 -64740577 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 817 342 261 75 42 chr17 30532074 30532091 -64740560 - B1F SINE Alu -108 41 26 5 817 213 292 111 0 chr17 30532136 30532208 -64740443 - ID4_ SINE ID -1 82 3 5 817 401 266 51 21 chr17 30532310 30532493 -64740158 + B4 SINE B4 5 190 -102 5 817 246 62 0 0 chr17 30532498 30532530 -64740121 + (TTTTC)n Simple_repeat Simple_repeat 4 35 0 5 817 182 65 0 61 chr17 30533556 30533589 -64739062 + (TCCC)n Simple_repeat Simple_repeat 3 33 0 5 817 198 62 20 59 chr17 30533875 30533926 -64738725 + (TTTTTG)n Simple_repeat Simple_repeat 6 54 0 5 817 1200 36 0 0 chr17 30533946 30534085 -64738566 - B1_Mus1 SINE Alu -9 139 1 5 817 282 326 0 48 chr17 30535072 30535175 -64737476 - L3 LINE CR1 -1438 3051 2954 6 817 310 222 11 11 chr17 30535207 30535298 -64737353 + GA-rich Low_complexity Low_complexity 2 92 0 6 817 534 278 136 0 chr17 30535897 30536073 -64736578 + B4 SINE B4 1 200 -92 6 817 309 247 0 0 chr17 30537365 30537454 -64735197 + L1MB8 LINE L1 6090 6178 0 6 817 651 278 38 24 chr17 30538220 30538430 -64734221 + ORR1E LTR MaLR 113 325 -34 6 817 316 284 27 0 chr17 30538699 30538773 -64733878 - ID4_ SINE ID -4 79 4 6 817 944 260 82 27 chr17 30539358 30539750 -64732901 + L1MA4 LINE L1 5757 6174 -126 6 818 23 0 0 0 chr17 30539861 30539884 -64732767 + AT_rich Low_complexity Low_complexity 1 23 0 6 818 284 341 24 0 chr17 30540220 30540346 -64732305 - L1M5 LINE L1 -1404 4742 4614 6 818 27 0 0 0 chr17 30540880 30540907 -64731744 + AT_rich Low_complexity Low_complexity 1 27 0 6 818 268 339 107 8 chr17 30540933 30541064 -64731587 + MIRb SINE MIR 62 205 -57 7 818 216 315 0 0 chr17 30541169 30541223 -64731428 - PB1 SINE Alu -61 66 13 7 818 234 0 0 0 chr17 30543691 30543717 -64728934 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 818 459 0 0 0 chr17 30544168 30544219 -64728432 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 818 246 324 20 87 chr17 30544951 30545100 -64727551 + L2 LINE L2 2286 2424 -995 7 818 222 205 0 0 chr17 30545678 30545717 -64726934 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 818 204 338 147 22 chr17 30549144 30549546 -64723105 - L2 LINE L2 -1037 2382 1931 7 818 243 296 0 14 chr17 30550274 30550346 -64722305 - MIR SINE MIR -5 257 187 7 818 3000 208 122 63 chr17 30550531 30551383 -64721268 + RMER19B LTR ERVK 1 902 0 7 818 225 244 51 13 chr17 30552530 30552609 -64720042 + MLT1J1 LTR MaLR 240 321 -123 7 818 1520 207 86 14 chr17 30553424 30553786 -64718865 + MTD LTR MaLR 26 413 -6 8 818 1211 61 0 0 chr17 30553786 30553933 -64718718 + B1_Mm SINE Alu 1 147 0 8 818 235 297 93 41 chr17 30555159 30555203 -64717448 + B4 SINE B4 43 219 -69 8 818 484 219 57 0 chr17 30555203 30555327 -64717324 + B1_Mus1 SINE Alu 3 141 -7 8 818 212 185 19 0 chr17 30555339 30555393 -64717258 + (CATA)n Simple_repeat Simple_repeat 4 58 0 8 818 634 278 87 39 chr17 30558957 30559351 -64713300 - L1MD LINE L1 -616 5728 5316 8 818 279 0 0 0 chr17 30559441 30559472 -64713179 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 818 338 207 79 9 chr17 30559494 30559601 -64713050 - L1MD LINE L1 -839 5307 5191 8 818 216 0 0 0 chr17 30559651 30559675 -64712976 + (T)n Simple_repeat Simple_repeat 1 24 0 8 818 1146 68 0 13 chr17 30559675 30559824 -64712827 - B1_Mus2 SINE Alu 0 147 1 8 818 235 276 226 6 chr17 30560391 30560555 -64712096 - L2 LINE L2 -896 2523 2324 8 818 24 0 0 0 chr17 30562415 30562439 -64710212 + AT_rich Low_complexity Low_complexity 1 24 0 9 818 744 52 0 0 chr17 30563754 30563850 -64708801 - B1_Mus2 SINE Alu 0 147 52 9 818 616 281 80 40 chr17 30564009 30564518 -64708133 - L1MC LINE L1 -2276 3870 3321 9 818 636 132 97 0 chr17 30564735 30564848 -64707803 - B1_Mur2 SINE Alu -13 136 13 9 818 198 255 0 0 chr17 30566091 30566138 -64706513 + L2c LINE L2 3292 3338 -49 9 818 231 296 109 7 chr17 30567989 30568091 -64704560 - B1F1 SINE Alu -7 110 6 9 818 364 300 194 25 chr17 30570958 30571099 -64701552 + L1ME4a LINE L1 5694 5852 -272 9 818 1385 93 38 0 chr17 30571099 30571282 -64701369 + B2_Mm2 SINE B2 1 190 -5 9 818 364 300 194 25 chr17 30571282 30571465 -64701186 + L1ME4a LINE L1 5853 6072 -52 9 818 749 237 107 10 chr17 30571495 30571691 -64700960 - B3 SINE B2 -1 215 1 9 818 29 101 0 0 chr17 30573617 30573716 -64698935 + AT_rich Low_complexity Low_complexity 1 99 0 9 818 410 288 109 42 chr17 30573801 30573993 -64698658 + ID_B1 SINE B4 3 207 -17 1 818 1028 88 102 28 chr17 30574943 30575119 -64697532 + B2_Mm2 SINE B2 1 189 -6 1 818 827 45 18 0 chr17 30575141 30575253 -64697398 + B1_Mus2 SINE Alu 34 147 0 1 818 480 89 0 0 chr17 30575270 30575349 -64697302 + (TATG)n Simple_repeat Simple_repeat 2 80 0 1 818 396 267 91 93 chr17 30575417 30575737 -64696914 + MTEb LTR MaLR 1 372 -7 1 818 1003 288 43 9 chr17 30575739 30576065 -64696586 + MTEb-int LTR MaLR 1 337 -1243 1 818 1904 307 82 87 chr17 30576101 30576293 -64696358 + MTEb-int LTR MaLR 465 657 -923 1 818 372 43 0 0 chr17 30576293 30576339 -64696312 + (TTATA)n Simple_repeat Simple_repeat 1 46 0 1 818 1904 307 82 87 chr17 30576339 30576931 -64695720 + MTEb-int LTR MaLR 658 1319 -261 1 818 1158 116 14 104 chr17 30576931 30577051 -64695600 + B2_Mm2 SINE B2 1 119 -76 1 818 1011 96 0 0 chr17 30577051 30577186 -64695465 + B1_Mm SINE Alu 3 137 -10 1 818 180 0 0 0 chr17 30577186 30577206 -64695445 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 818 1158 116 14 104 chr17 30577206 30577295 -64695356 + B2_Mm2 SINE B2 120 191 -4 1 818 1904 307 82 87 chr17 30577295 30577577 -64695074 + MTEb-int LTR MaLR 1320 1526 -54 1 818 582 293 75 69 chr17 30577577 30577935 -64694716 + ORR1E LTR MaLR 1 368 -2 1 818 438 20 0 0 chr17 30579699 30579750 -64692901 + (CAGGA)n Simple_repeat Simple_repeat 3 53 0 1 818 1516 138 6 113 chr17 30581149 30581476 -64691175 - ORR1B1 LTR MaLR 0 394 103 1 818 529 124 20 40 chr17 30583755 30583856 -64688795 + B1_Mus2 SINE Alu 49 147 0 1 818 927 183 0 0 chr17 30583856 30584036 -64688615 + GA-rich Low_complexity Low_complexity 1 180 0 1 818 205 57 0 79 chr17 30584038 30584076 -64688575 + (GAAAA)n Simple_repeat Simple_repeat 2 36 0 1 818 4275 63 15 11 chr17 30584789 30585336 -64687315 - L1_Mus1 LINE L1 0 6567 6019 1 818 499 316 60 13 chr17 30585583 30585817 -64686834 - MER2 DNA MER2_type -6 339 95 1 818 380 181 25 17 chr17 30585879 30585997 -64686654 + CT-rich Low_complexity Low_complexity 3 121 0 1 818 1237 151 97 0 chr17 30586946 30587152 -64685499 + URR1A DNA MER1_type 1 226 0 1 818 2457 66 31 59 chr17 30587201 30587557 -64685094 + ORR1A1 LTR MaLR 1 346 0 1 818 9182 60 15 0 chr17 30587557 30588859 -64683792 + ORR1A1-int LTR MaLR 1 1321 -471 1 818 538 0 0 14 chr17 30588863 30588932 -64683719 + ORR1A1 LTR MaLR 279 346 0 1 818 1130 50 0 0 chr17 30589175 30589314 -64683337 + B1_Mus1 SINE Alu 1 139 -9 1 818 198 0 0 0 chr17 30589314 30589336 -64683315 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1 818 366 59 0 0 chr17 30592074 30592111 -64680540 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 1 818 1699 21 0 0 chr17 30592111 30592301 -64680350 - B2_Mm1a SINE B2 -2 191 2 1 818 366 59 0 0 chr17 30592301 30592314 -64680337 + (TTTA)n Simple_repeat Simple_repeat 3 15 0 1 818 22 0 0 0 chr17 30594878 30594900 -64677751 + AT_rich Low_complexity Low_complexity 1 22 0 1 818 1391 56 34 0 chr17 30596417 30596595 -64676056 - B2_Mm1a SINE B2 -7 186 3 1 818 225 316 139 17 chr17 30598511 30598691 -64673960 + Charlie23a DNA MER1_type 50 251 -88 1 818 23 0 0 0 chr17 30599164 30599187 -64673464 + AT_rich Low_complexity Low_complexity 1 23 0 1 818 219 231 77 0 chr17 30601599 30601664 -64670987 - ID4 SINE ID -13 70 1 1 818 224 303 30 90 chr17 30602331 30602465 -64670186 + L2c LINE L2 3085 3210 -177 1 818 1693 209 54 20 chr17 30603479 30603888 -64668763 + Lx7 LINE L1 6935 7357 -339 1 818 312 194 14 0 chr17 30603999 30604071 -64668580 + Lx7 LINE L1 7611 7683 -13 1 818 1182 68 0 0 chr17 30604090 30604237 -64668414 + B1_Mus1 SINE Alu 2 148 0 1 818 21 0 0 0 chr17 30604260 30604281 -64668370 + AT_rich Low_complexity Low_complexity 1 21 0 1 818 281 355 85 45 chr17 30608173 30608435 -64664216 + LTR16D1 LTR ERVL 35 390 -285 1 818 623 172 25 0 chr17 30608437 30608600 -64664051 + CT-rich Low_complexity Low_complexity 2 168 0 1 818 289 276 13 0 chr17 30609100 30609176 -64663475 + ID4 SINE ID 3 79 -4 1 818 296 342 188 43 chr17 30609378 30609723 -64662928 + MLT1L LTR MaLR 216 610 0 1 818 1204 35 14 0 chr17 30610110 30610255 -64662396 - B1_Mus2 SINE Alu 0 147 1 1 818 947 68 114 0 chr17 30610552 30610684 -64661967 + B1_Mus1 SINE Alu 1 147 -1 1 818 411 21 0 0 chr17 30610811 30610859 -64661792 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 818 846 248 4 47 chr17 30610905 30611138 -64661513 + ID_B1 SINE B4 1 223 -1 1 818 449 231 0 19 chr17 30611234 30611340 -64661311 - PB1D9 SINE Alu 0 120 17 1 818 279 229 47 62 chr17 30612594 30612730 -64659921 + MLT1J1 LTR MaLR 41 172 -276 1 818 1180 68 0 0 chr17 30613798 30613945 -64658706 - B1_Mus2 SINE Alu 0 147 1 1 818 270 305 91 8 chr17 30616605 30616737 -64655914 + MER102a DNA MER1_type 46 188 -142 1 818 242 317 47 47 chr17 30617095 30617224 -64655427 - B4A SINE B4 -163 129 1 1 818 1270 214 63 27 chr17 30617348 30617714 -64654937 + MTE2a LTR MaLR 1 379 0 1 818 471 266 112 16 chr17 30618490 30618677 -64653974 - L2 LINE L2 -426 2993 2789 1 818 335 327 114 14 chr17 30618764 30618975 -64653676 - L2 LINE L2 -636 2783 2552 1 818 243 0 0 0 chr17 30619362 30619389 -64653262 + (T)n Simple_repeat Simple_repeat 1 27 0 1 818 1210 61 0 0 chr17 30619389 30619536 -64653115 - B1_Mus1 SINE Alu 0 148 2 1 818 674 222 85 0 chr17 30619615 30619791 -64652860 - B3 SINE B2 -23 193 3 1 818 200 216 59 0 chr17 30622248 30622299 -64650352 + L2a LINE L2 3269 3322 -104 1 818 1198 55 0 0 chr17 30622908 30623054 -64649597 - B1_Mus2 SINE Alu 0 147 2 1 818 378 0 0 0 chr17 30623142 30623184 -64649467 + (CAAAT)n Simple_repeat Simple_repeat 3 44 0 1 818 255 61 0 0 chr17 30624619 30624652 -64647999 + (GGGA)n Simple_repeat Simple_repeat 2 34 0 1 818 920 123 0 21 chr17 30625395 30625536 -64647115 + B1_Mus1 SINE Alu 3 140 -8 1 818 276 65 31 46 chr17 30625537 30625584 -64647067 + (CAAA)n Simple_repeat Simple_repeat 4 50 0 1 818 1162 75 0 7 chr17 30625584 30625732 -64646919 + B1_Mus1 SINE Alu 2 148 0 1 818 276 65 31 46 chr17 30625732 30625749 -64646902 + (CAAA)n Simple_repeat Simple_repeat 3 19 0 1 818 1186 47 0 13 chr17 30626046 30626181 -64646470 + B1_Mus1 SINE Alu 1 135 -13 1 818 243 0 0 0 chr17 30626181 30626208 -64646443 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 1 818 1186 47 0 13 chr17 30626208 30626222 -64646429 + B1_Mus1 SINE Alu 136 148 0 1 818 27 0 0 0 chr17 30627501 30627528 -64645123 + AT_rich Low_complexity Low_complexity 1 27 0 1 818 385 137 0 35 chr17 30628097 30628177 -64644474 + PB1D10 SINE Alu 48 147 0 1 818 283 254 15 0 chr17 30629168 30629235 -64643416 + ID4_ SINE ID 2 69 -14 1 818 1852 153 34 59 chr17 30629245 30629633 -64643018 + ORR1C1 LTR MaLR 1 378 0 1 818 195 42 0 0 chr17 30629935 30629959 -64642692 + (T)n Simple_repeat Simple_repeat 1 24 0 1 818 1229 48 0 0 chr17 30629959 30630104 -64642547 - B1_Mus1 SINE Alu 0 148 4 1 818 213 295 154 0 chr17 30630116 30630194 -64642457 - PB1D7 SINE Alu -7 113 24 1 818 314 320 143 0 chr17 30631885 30632032 -64640619 - MER20 DNA MER1_type -51 168 1 1 818 231 271 14 14 chr17 30632633 30632704 -64639947 - MLT1A1 LTR MaLR -300 108 38 1 818 267 204 243 0 chr17 30632783 30632886 -64639765 - B1F SINE Alu -17 132 5 1 818 441 54 0 0 chr17 30633422 30633478 -64639173 + (TCC)n Simple_repeat Simple_repeat 3 58 0 1 818 670 264 156 47 chr17 30633552 30634057 -64638594 - Lx8 LINE L1 -1584 5889 5307 1 818 243 0 0 0 chr17 30634642 30634669 -64637982 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 818 33260 76 8 5 chr17 30636533 30641664 -64630987 + L1Md_F LINE L1 392 5537 -346 1 818 625 197 68 8 chr17 30641956 30642089 -64630562 - RSINE1 SINE B4 -14 151 11 1 818 192 77 0 0 chr17 30643200 30643226 -64629425 + (GAAAA)n Simple_repeat Simple_repeat 2 27 0 1 818 261 0 0 0 chr17 30643650 30643679 -64628972 + (T)n Simple_repeat Simple_repeat 1 29 0 1 818 22 70 0 0 chr17 30644869 30644912 -64627739 + AT_rich Low_complexity Low_complexity 1 43 0 1 818 282 29 0 0 chr17 30645870 30645905 -64626746 + (CGAA)n Simple_repeat Simple_repeat 2 36 0 1 818 26 0 0 0 chr17 30646420 30646446 -64626205 + AT_rich Low_complexity Low_complexity 1 26 0 1 818 249 33 0 0 chr17 30646515 30646545 -64626106 + (GA)n Simple_repeat Simple_repeat 1 30 0 1 818 1219 55 0 0 chr17 30648117 30648263 -64624388 + B1_Mm SINE Alu 2 147 0 1 818 810 222 178 51 chr17 30648383 30648715 -64623936 + ORR1D1 LTR MaLR 1 374 0 1 818 390 205 0 0 chr17 30648784 30648867 -64623784 + GA-rich Low_complexity Low_complexity 4 86 0 1 818 225 94 0 0 chr17 30649241 30649273 -64623378 + (TCC)n Simple_repeat Simple_repeat 3 34 0 1 818 180 0 0 0 chr17 30650410 30650430 -64622221 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1 818 586 243 29 93 chr17 30651971 30652175 -64620476 - B3A SINE B2 -6 192 2 1 818 723 173 203 16 chr17 30653138 30653320 -64619331 + B3 SINE B2 1 216 0 1 818 1971 138 98 8 chr17 30653529 30653908 -64618743 + MTC LTR MaLR 1 413 -8 1 818 1256 34 0 0 chr17 30654520 30654667 -64617984 + B1_Mus2 SINE Alu 1 147 0 1 818 259 199 66 0 chr17 30655911 30656062 -64616589 + (CAGCT)n Simple_repeat Simple_repeat 1 161 0 1 818 216 207 64 12 chr17 30656084 30656255 -64616396 + (CAGCT)n Simple_repeat Simple_repeat 1 180 0 1 818 384 22 0 0 chr17 30658549 30658594 -64614057 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 818 183 125 79 111 chr17 30659898 30659961 -64612690 - MIR SINE MIR -43 219 159 1 818 720 277 89 35 chr17 30660042 30660300 -64612351 + B4 SINE B4 1 272 -20 1 818 711 80 369 21 chr17 30661114 30661255 -64611396 + B2_Mm2 SINE B2 2 191 -4 1 818 387 214 11 47 chr17 30662057 30662151 -64610500 + B1F SINE Alu 24 115 -35 1 818 417 95 0 0 chr17 30662380 30662443 -64610208 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 818 1511 197 81 30 chr17 30662525 30662922 -64609729 + MTD LTR MaLR 1 417 -2 1 818 511 319 64 32 chr17 30662972 30663254 -64609397 - L1MA4 LINE L1 -385 5915 5625 2 818 1130 66 0 0 chr17 30663922 30664058 -64608593 - B1_Mm SINE Alu -10 137 2 2 818 947 112 29 20 chr17 30664800 30664966 -64607685 + B2_Mm2 SINE B2 23 186 -9 2 818 237 131 49 0 chr17 30666548 30666609 -64606042 + (TA)n Simple_repeat Simple_repeat 1 64 0 2 818 331 255 61 0 chr17 30667422 30667520 -64605131 - B1F SINE Alu -2 147 44 2 818 341 297 31 52 chr17 30668020 30668116 -64604535 + PB1D10 SINE Alu 7 100 -17 2 818 6019 65 21 81 chr17 30668287 30669288 -64603363 + MTA_Mm-int LTR MaLR 158 1098 0 2 818 3048 52 33 20 chr17 30669288 30669679 -64602972 + MTA_Mm LTR MaLR 1 396 0 2 818 1066 99 47 0 chr17 30669954 30670125 -64602526 - B2_Mm1t SINE B2 -1 192 14 2 818 577 87 22 0 chr17 30670224 30670316 -64602335 + ORR1D1 LTR MaLR 2 95 -279 2 818 388 267 193 0 chr17 30670334 30670484 -64602167 + ORR1D1 LTR MaLR 196 374 0 2 818 519 295 24 0 chr17 30670638 30670804 -64601847 - MER58B DNA MER1_type 0 341 172 2 102 1727 21 0 0 chr17 30670822 30671015 -64601636 - B2_Mm1a SINE B2 0 193 1 2 819 371 280 56 62 chr17 30671701 30671861 -64600790 - MER5B DNA MER1_type 0 178 20 2 819 945 241 164 11 chr17 30672338 30672691 -64599960 - MTD LTR MaLR -12 407 1 2 819 649 213 40 16 chr17 30673458 30673644 -64599007 + B3 SINE B2 1 188 -7 2 819 315 258 31 46 chr17 30673938 30674068 -64598583 + MLT1H LTR MaLR 409 536 -13 2 819 272 259 23 12 chr17 30674087 30674173 -64598478 + L1M2 LINE L1 4261 4347 -1796 2 819 474 291 14 28 chr17 30674251 30674396 -64598255 + MTE2b LTR MaLR 20 162 -217 2 819 412 257 50 0 chr17 30674465 30674566 -64598085 + MTE2b LTR MaLR 192 297 -82 2 819 611 283 49 20 chr17 30674577 30675014 -64597637 + L1M2 LINE L1 5020 5472 -825 2 819 292 289 88 107 chr17 30675069 30675159 -64597492 + B3A SINE B2 27 128 -70 2 819 3076 42 5 3 chr17 30675159 30675541 -64597110 + L1Md_F2 LINE L1 6200 6582 0 2 819 292 289 88 107 chr17 30675541 30675609 -64597042 + B3A SINE B2 129 182 -16 2 819 966 281 143 68 chr17 30675686 30675814 -64596837 - MER68 LTR ERVL 0 563 439 2 819 863 199 71 5 chr17 30675814 30676011 -64596640 + B3 SINE B2 1 210 -6 2 819 966 281 143 68 chr17 30676011 30676398 -64596253 - MER68 LTR ERVL -125 438 9 2 819 599 264 78 6 chr17 30676977 30677156 -64595495 - B3A SINE B2 -6 192 1 2 819 1039 138 13 7 chr17 30677190 30677384 -64595267 + B2_Mm2 SINE B2 1 209 -7 2 819 286 245 132 0 chr17 30677517 30677623 -64595028 + ID_B1 SINE B4 81 200 -24 2 819 365 302 188 0 chr17 30679125 30679274 -64593377 - Charlie20a DNA Charlie -139 668 492 2 819 189 0 0 0 chr17 30679633 30679654 -64592997 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 819 255 61 0 0 chr17 30679671 30679704 -64592947 + (TA)n Simple_repeat Simple_repeat 1 33 0 2 819 375 23 0 0 chr17 30679704 30679747 -64592904 + (GA)n Simple_repeat Simple_repeat 2 45 0 2 819 732 180 57 7 chr17 30679768 30679908 -64592743 - B1_Mur4 SINE Alu 0 150 4 2 819 3445 33 5 0 chr17 30681472 30681866 -64590785 - MTA_Mm LTR MaLR 0 396 1 2 819 7943 59 48 3 chr17 30681866 30682917 -64589734 - MTA_Mm-int LTR MaLR 0 1098 1 2 819 3413 25 2 22 chr17 30682917 30683321 -64589330 - MTA_Mm LTR MaLR 0 396 1 2 819 452 151 0 0 chr17 30683822 30683895 -64588756 - RSINE1 SINE B4 -40 125 53 2 819 231 222 139 0 chr17 30684460 30684532 -64588119 + B3A SINE B2 1 82 -116 2 819 727 221 0 32 chr17 30684932 30685086 -64587565 + B1_Mur1 SINE Alu 1 149 0 2 819 384 192 24 71 chr17 30685118 30685202 -64587449 - ID4 SINE ID -2 81 2 2 819 860 108 62 35 chr17 30685469 30685613 -64587038 + B1_Mus1 SINE Alu 1 148 0 2 819 21 0 0 0 chr17 30685613 30685634 -64587017 + AT_rich Low_complexity Low_complexity 1 21 0 2 819 1263 85 22 22 chr17 30685799 30685979 -64586672 + B2_Mm2 SINE B2 2 181 -14 2 819 476 286 64 0 chr17 30686059 30686199 -64586452 + RSINE1 SINE B4 3 151 -14 2 819 180 0 0 0 chr17 30686232 30686252 -64586399 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 819 306 327 51 63 chr17 30686478 30686791 -64585860 + Lx8 LINE L1 7115 7409 -64 2 819 493 253 71 76 chr17 30686953 30687137 -64585514 + B3A SINE B2 1 183 -15 2 819 236 273 44 22 chr17 30688137 30688227 -64584424 + MER33 DNA MER1_type 30 121 -203 2 819 575 76 0 0 chr17 30688407 30688486 -64584165 + B1_Mus2 SINE Alu 4 82 -65 2 819 385 158 0 95 chr17 30688414 30688498 -64584153 + MT2B LTR ERVL 175 250 -351 2 819 384 22 0 0 chr17 30688500 30688545 -64584106 + (GAAA)n Simple_repeat Simple_repeat 4 48 0 2 819 227 309 15 0 chr17 30688550 30688618 -64584033 + MIR SINE MIR 43 111 -151 2 819 256 267 0 26 chr17 30688736 30688813 -64583838 - B4 SINE B4 -215 77 3 2 819 233 246 82 66 chr17 30689567 30689689 -64582962 - RSINE1 SINE B4 -39 126 3 2 819 564 237 77 48 chr17 30690487 30690644 -64582007 + B4A SINE B4 63 219 -73 2 819 860 168 219 11 chr17 30690644 30690831 -64581820 + URR1A DNA MER1_type 1 226 0 2 819 564 237 77 48 chr17 30690831 30690881 -64581770 + B4A SINE B4 220 275 -17 2 819 225 0 0 0 chr17 30690909 30690934 -64581717 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 819 275 67 44 0 chr17 30690946 30690991 -64581660 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2 819 1168 56 0 0 chr17 30690995 30691137 -64581514 - B1_Mm SINE Alu -1 146 5 2 819 3243 31 13 0 chr17 30691557 30691944 -64580707 - L1Md_F2 LINE L1 0 6582 6191 2 819 249 169 67 17 chr17 30692176 30692236 -64580415 + MTEa LTR MaLR 109 171 -208 2 819 303 278 11 0 chr17 30692249 30692339 -64580312 + MTEa LTR MaLR 270 360 -19 2 819 205 350 86 14 chr17 30692373 30692512 -64580139 + L2 LINE L2 2702 2850 -569 2 819 466 189 121 54 chr17 30692612 30692881 -64579770 + ORR1D1 LTR MaLR 11 328 -46 2 819 442 220 0 11 chr17 30693125 30693217 -64579434 - RMER15-int LTR ERVL -21 4978 4888 2 819 842 277 122 32 chr17 30693440 30693883 -64578768 - RMER15-int LTR ERVL -299 4700 4218 2 819 1965 107 31 109 chr17 30693953 30694310 -64578341 - ORR1A4 LTR MaLR 0 329 1 2 819 692 284 60 25 chr17 30694327 30694562 -64578089 - RMER15-int LTR ERVL -2465 2534 2292 2 819 996 221 112 26 chr17 30694805 30695144 -64577507 - RMER15-int LTR ERVL -2980 2019 1652 2 819 328 278 122 0 chr17 30695691 30695806 -64576845 + ID_B1 SINE B4 96 224 0 2 819 1256 50 11 16 chr17 30697084 30697267 -64575384 - B2_Mm2 SINE B2 -3 192 11 2 819 1068 264 94 29 chr17 30697316 30697387 -64575264 + L1MA4A LINE L1 4823 4894 -1249 2 819 1443 187 118 9 chr17 30697387 30697733 -64574918 - ORR1C2 LTR MaLR 0 384 1 2 819 1068 264 94 29 chr17 30697733 30698149 -64574502 + L1MA4A LINE L1 4895 5342 -801 2 819 270 0 0 0 chr17 30698157 30698187 -64574464 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2 819 1051 30 0 0 chr17 30698187 30698321 -64574330 - B1_Mus1 SINE Alu -9 139 6 2 819 809 277 148 42 chr17 30698335 30698883 -64573768 + L1MA4A LINE L1 5290 5952 -351 2 819 1270 117 21 0 chr17 30699122 30699310 -64573341 - B2_Mm1t SINE B2 0 193 2 2 819 1070 108 0 7 chr17 30699460 30699609 -64573042 + B1_Mus1 SINE Alu 1 148 0 2 819 471 18 0 0 chr17 30699626 30699682 -64572969 + (GAAA)n Simple_repeat Simple_repeat 3 58 0 2 819 219 211 0 0 chr17 30699682 30699720 -64572931 - ID4 SINE ID -44 39 2 2 819 512 293 30 0 chr17 30699778 30699911 -64572740 - RSINE1 SINE B4 -25 140 4 2 819 294 279 48 16 chr17 30699915 30700039 -64572612 + L2a LINE L2 3293 3420 -6 2 819 993 114 14 0 chr17 30700196 30700336 -64572315 + B1_Mur4 SINE Alu 1 142 -8 2 819 432 0 0 0 chr17 30700338 30700386 -64572265 + (TAA)n Simple_repeat Simple_repeat 2 49 0 2 819 704 338 115 53 chr17 30700714 30701252 -64571399 + L1MC4 LINE L1 6112 6682 -1200 2 819 354 80 0 0 chr17 30701252 30701302 -64571349 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 819 750 315 95 2 chr17 30701302 30701569 -64571082 + L1MC4 LINE L1 6683 6991 -1051 2 819 920 91 28 14 chr17 30701770 30701915 -64570736 + B1_Mus1 SINE Alu 2 148 0 2 819 186 71 0 0 chr17 30701917 30701945 -64570706 + (A)n Simple_repeat Simple_repeat 1 28 0 2 819 448 212 76 8 chr17 30702512 30702631 -64570020 - MTD LTR MaLR 0 419 293 2 819 371 294 174 7 chr17 30702630 30702774 -64569877 - MTD LTR MaLR -247 172 5 2 819 300 263 81 48 chr17 30702817 30702829 -64569822 + ID_B1 SINE B4 83 112 -112 2 819 330 218 90 0 chr17 30702829 30702907 -64569744 + PB1D9 SINE Alu 9 93 -27 2 819 300 263 81 48 chr17 30702907 30702941 -64569710 + ID_B1 SINE B4 113 210 -14 2 819 342 313 137 14 chr17 30703286 30703663 -64568988 + MLT1F1 LTR MaLR 76 560 -9 2 819 1123 180 183 3 chr17 30703985 30704302 -64568349 - ORR1D1 LTR MaLR 0 374 1 2 819 1018 82 7 0 chr17 30704479 30704625 -64568026 + B1_Mus1 SINE Alu 2 148 0 2 819 769 243 29 73 chr17 30705929 30706133 -64566518 - ID_B1 SINE B4 -1 223 29 2 819 864 148 35 0 chr17 30706648 30706790 -64565861 - B1_Mus1 SINE Alu 0 148 2 2 819 1337 198 125 8 chr17 30707117 30707468 -64565183 - MTD LTR MaLR -14 405 14 2 819 379 302 69 6 chr17 30707903 30708076 -64564575 + MER5A DNA MER1_type 1 184 -5 2 819 397 253 14 79 chr17 30708197 30708353 -64564298 + MLT1A0 LTR MaLR 244 373 -17 2 819 583 158 165 0 chr17 30709089 30709216 -64563435 + B1_Mur2 SINE Alu 2 149 0 2 819 372 322 24 24 chr17 30709788 30709912 -64562739 - ID_B1 SINE B4 -11 213 90 2 819 419 211 26 68 chr17 30710322 30710439 -64562212 + PB1D9 SINE Alu 2 113 -7 2 819 1201 55 0 0 chr17 30710451 30710597 -64562054 + B1_Mus2 SINE Alu 2 147 0 2 819 643 136 184 0 chr17 30710640 30710765 -64561886 + B1_Mus1 SINE Alu 1 148 0 2 819 222 191 0 0 chr17 30710781 30710828 -64561823 + GA-rich Low_complexity Low_complexity 3 49 0 2 819 1000 199 193 57 chr17 30710909 30711277 -64561374 - MTD LTR MaLR 0 419 2 2 819 207 0 0 0 chr17 30712461 30712484 -64560167 + (TAA)n Simple_repeat Simple_repeat 3 25 0 2 819 208 269 38 19 chr17 30712853 30712959 -64559692 + C-rich Low_complexity Low_complexity 1 108 0 2 819 30 69 0 0 chr17 30712983 30713041 -64559610 + GC_rich Low_complexity Low_complexity 1 58 0 2 819 186 208 0 0 chr17 30713162 30713215 -64559436 + (CCG)n Simple_repeat Simple_repeat 3 55 0 2 819 1183 61 0 7 chr17 30714446 30714595 -64558056 + B1_Mus1 SINE Alu 1 148 0 2 819 273 266 118 58 chr17 30714857 30715098 -64557553 + MLT1D LTR MaLR 183 505 0 3 819 213 338 42 70 chr17 30715697 30715840 -64556811 - MIR SINE MIR -64 198 60 3 819 443 268 0 180 chr17 30716507 30716646 -64556005 + RSINE1 SINE B4 2 120 -45 3 819 1275 44 23 157 chr17 30716646 30716686 -64555965 + B2_Mm2 SINE B2 1 40 -155 3 819 1140 55 0 7 chr17 30716686 30716833 -64555818 + B1_Mus2 SINE Alu 2 147 0 3 819 1275 44 23 157 chr17 30716833 30717008 -64555643 + B2_Mm2 SINE B2 41 187 -8 3 819 443 268 0 180 chr17 30717008 30717068 -64555583 + RSINE1 SINE B4 121 165 0 3 819 590 152 52 35 chr17 30717429 30717545 -64555106 - PB1D9 SINE Alu -1 119 2 3 819 456 261 32 101 chr17 30717693 30717851 -64554800 + B3A SINE B2 40 186 -12 3 819 222 357 99 25 chr17 30718525 30718686 -64553965 + L4 LINE RTE 1657 1829 -200 3 819 256 293 0 13 chr17 30718693 30718769 -64553882 + ID2 SINE ID 3 77 -6 3 819 201 94 0 0 chr17 30718776 30718808 -64553843 + (A)n Simple_repeat Simple_repeat 1 32 0 3 819 1082 102 6 0 chr17 30719358 30719524 -64553127 + B2_Mm1a SINE B2 1 167 -26 3 819 952 137 7 33 chr17 30719640 30719791 -64552860 - B1_Mus1 SINE Alu -1 147 1 3 819 1831 207 48 13 chr17 30720317 30720777 -64551874 - RLTR11A LTR ERVK -52 476 1 3 819 567 222 158 23 chr17 30722084 30722255 -64550396 + B3A SINE B2 1 194 -4 3 819 782 274 86 24 chr17 30722352 30722644 -64550007 - L1MB8 LINE L1 -1 6177 5868 3 819 222 301 42 131 chr17 30723401 30723592 -64549059 - B4 SINE B4 -118 174 1 3 819 1238 84 84 6 chr17 30724407 30724586 -64548065 + B2_Mm2 SINE B2 2 194 -1 3 819 225 154 0 103 chr17 30724827 30724885 -64547766 + MER5A DNA MER1_type 9 60 -129 3 819 1509 43 27 0 chr17 30724886 30725072 -64547579 - B2_Mm1a SINE B2 -2 191 1 3 819 472 266 55 55 chr17 30725129 30725312 -64547339 + B4A SINE B4 42 224 -68 3 819 202 79 0 95 chr17 30725312 30725327 -64547324 + A-rich Low_complexity Low_complexity 4 15 0 3 819 1163 71 0 0 chr17 30725327 30725467 -64547184 + B1_Mm SINE Alu 1 140 -7 3 819 202 79 0 95 chr17 30725467 30725493 -64547158 + A-rich Low_complexity Low_complexity 16 41 0 3 819 254 190 33 33 chr17 30725493 30725553 -64547098 + B4A SINE B4 217 276 -16 3 819 300 53 0 0 chr17 30725578 30725616 -64547035 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 819 269 275 29 14 chr17 30725676 30725746 -64546905 + MER5A DNA MER1_type 117 187 -2 3 819 180 0 0 0 chr17 30726488 30726508 -64546143 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 3 819 1150 37 0 0 chr17 30726510 30726645 -64546006 - B1_Mus1 SINE Alu -13 135 1 3 819 316 280 265 54 chr17 30726839 30727005 -64545646 - B3A SINE B2 -13 203 3 3 819 1442 65 5 11 chr17 30727091 30727277 -64545374 + B2_Mm1t SINE B2 1 185 -8 3 819 485 131 113 15 chr17 30727324 30727430 -64545221 - B1_Mur3 SINE Alu -9 140 39 3 819 341 161 19 123 chr17 30727906 30728012 -64544639 + MER20B DNA MER1_type 1 95 -688 3 819 595 101 235 2 chr17 30728022 30728179 -64544472 + RMER17C LTR ERVK 2 236 -722 3 819 292 284 18 35 chr17 30728182 30728295 -64544356 + L1MC3 LINE L1 7135 7245 -540 3 819 239 315 184 65 chr17 30728779 30728996 -64543655 + MLT1A0 LTR MaLR 1 243 -122 3 819 1189 55 0 7 chr17 30729029 30729176 -64543475 + B1_Mm SINE Alu 2 147 0 3 819 198 103 0 0 chr17 30730483 30730512 -64542139 + (A)n Simple_repeat Simple_repeat 1 29 0 3 819 189 0 0 0 chr17 30731210 30731231 -64541420 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 3 819 192 97 0 0 chr17 30732024 30732055 -64540596 + (CCCCCA)n Simple_repeat Simple_repeat 6 36 0 3 819 330 230 31 12 chr17 30733118 30733230 -64539421 - ID4 SINE ID -25 127 13 3 819 1198 48 7 0 chr17 30733634 30733779 -64538872 + B1_Mm SINE Alu 2 147 0 3 819 896 277 5 5 chr17 30733947 30734154 -64538497 - B3 SINE B2 -8 208 2 3 819 947 65 60 73 chr17 30734461 30734611 -64538040 + B1_Mus1 SINE Alu 1 148 0 3 819 273 119 0 0 chr17 30734679 30734721 -64537930 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 819 26 64 0 0 chr17 30735144 30735191 -64537460 + AT_rich Low_complexity Low_complexity 1 47 0 3 819 28 61 0 0 chr17 30735214 30735263 -64537388 + AT_rich Low_complexity Low_complexity 1 49 0 3 819 359 344 76 33 chr17 30735312 30735328 -64537323 + MT2A LTR ERVL 220 234 -299 3 819 2630 93 40 35 chr17 30735328 30735729 -64536922 + RLTR9D LTR ERVK 1 403 0 3 819 359 344 76 33 chr17 30735729 30736013 -64536638 + MT2A LTR ERVL 235 532 -1 3 819 21 0 0 0 chr17 30736570 30736591 -64536060 + AT_rich Low_complexity Low_complexity 1 21 0 3 819 1070 88 0 26 chr17 30736721 30736873 -64535778 + B1_Mur4 SINE Alu 3 150 0 3 819 691 268 80 10 chr17 30737269 30737469 -64535182 + B4 SINE B4 14 227 -65 3 819 181 54 75 75 chr17 30737895 30737935 -64534716 - MIR SINE MIR -210 52 13 3 819 237 295 90 30 chr17 30738012 30738145 -64534506 - B1F SINE Alu -8 141 1 3 819 489 188 29 29 chr17 30738885 30738989 -64533662 - B1F2 SINE Alu -12 137 34 3 819 230 111 0 27 chr17 30739022 30739059 -64533592 - B4 SINE B4 -249 43 8 3 819 1014 78 35 14 chr17 30739469 30739612 -64533039 - B1_Mus1 SINE Alu -1 147 2 3 819 21 0 0 0 chr17 30740028 30740049 -64532602 + AT_rich Low_complexity Low_complexity 1 21 0 3 819 462 131 48 0 chr17 30740057 30740141 -64532510 - PB1D9 SINE Alu 0 120 33 3 819 263 114 0 0 chr17 30740679 30740714 -64531937 + B1_Mus1 SINE Alu 1 35 -113 3 819 349 304 39 23 chr17 30741410 30741538 -64531113 - ID_B1 SINE B4 -13 211 82 3 819 506 263 67 8 chr17 30741698 30741832 -64530819 - B1_Mur1 SINE Alu 0 149 8 3 819 234 287 35 129 chr17 30741738 30741854 -64530797 - MT2B LTR ERVL -344 257 153 3 819 728 124 79 40 chr17 30742001 30742127 -64530524 - B1_Mur4 SINE Alu 0 150 20 3 819 599 281 15 60 chr17 30742200 30742443 -64530208 + MTE2b LTR MaLR 84 406 -13 3 819 937 128 0 0 chr17 30742510 30742643 -64530008 + B1_Mus1 SINE Alu 2 134 -14 3 819 1407 94 11 0 chr17 30742754 30742945 -64529706 + B2_Mm1t SINE B2 1 193 0 3 819 389 245 49 0 chr17 30743572 30743674 -64528977 + MER90 LTR ERV1 171 277 -298 3 819 323 274 36 0 chr17 30743723 30743807 -64528844 + MER76 LTR ERVL 57 143 -548 3 819 414 0 0 0 chr17 30743812 30743858 -64528793 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 819 228 232 93 83 chr17 30744350 30744458 -64528193 + MLT1D LTR MaLR 292 400 -105 3 819 670 322 45 49 chr17 30744537 30744782 -64527869 - B4 SINE B4 0 292 49 3 819 351 0 0 0 chr17 30745829 30745868 -64526783 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 819 418 91 0 0 chr17 30745955 30746010 -64526641 - ORR1A3 LTR MaLR 0 326 272 3 819 814 232 76 51 chr17 30746621 30746857 -64525794 + MTEa LTR MaLR 84 325 -54 3 819 405 290 75 15 chr17 30747128 30747261 -64525390 + MIRb SINE MIR 96 236 -32 3 819 1102 108 16 64 chr17 30747424 30747612 -64525039 + B2_Mm2 SINE B2 1 179 -16 3 819 216 0 0 0 chr17 30747627 30747651 -64525000 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 3 819 279 0 0 0 chr17 30747654 30747685 -64524966 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 819 800 145 32 0 chr17 30747903 30748027 -64524624 + B1_Mur2 SINE Alu 22 149 0 3 819 360 0 0 0 chr17 30748027 30748067 -64524584 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 819 297 0 0 0 chr17 30748067 30748099 -64524552 + (GA)n Simple_repeat Simple_repeat 1 33 0 3 819 180 111 0 0 chr17 30748280 30748307 -64524344 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 819 180 0 0 0 chr17 30749744 30749764 -64522887 + (A)n Simple_repeat Simple_repeat 1 20 0 3 819 316 265 47 75 chr17 30750141 30750247 -64522404 + MLT1F2 LTR MaLR 74 176 -384 3 819 578 242 62 8 chr17 30750256 30750385 -64522266 + ID_B1 SINE B4 85 220 -4 3 819 365 348 139 24 chr17 30750608 30751153 -64521498 + L1ME3B LINE L1 5262 5869 -371 3 819 678 279 92 69 chr17 30751166 30751428 -64521223 + B4A SINE B4 4 271 -21 3 819 315 71 0 0 chr17 30751428 30751470 -64521181 + (T)n Simple_repeat Simple_repeat 1 42 0 3 819 1239 55 0 0 chr17 30751470 30751616 -64521035 - B1_Mus2 SINE Alu 0 147 2 3 819 233 196 0 0 chr17 30752027 30752068 -64520583 + T-rich Low_complexity Low_complexity 16 56 0 3 819 873 91 121 0 chr17 30752068 30752200 -64520451 - B1_Mus1 SINE Alu 0 148 1 3 819 233 196 0 0 chr17 30752200 30752214 -64520437 + T-rich Low_complexity Low_complexity 2 15 0 3 819 519 228 69 7 chr17 30752340 30752461 -64520190 - ID_B1 SINE B4 -62 230 106 3 819 900 201 64 40 chr17 30752581 30752641 -64520010 + B3 SINE B2 9 67 -149 3 819 1945 123 65 3 chr17 30752641 30752951 -64519700 + ORR1A4 LTR MaLR 1 329 0 3 819 900 201 64 40 chr17 30752951 30753048 -64519603 + B3 SINE B2 68 164 -52 3 819 396 0 0 0 chr17 30753048 30753092 -64519559 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 819 900 201 64 40 chr17 30753092 30753135 -64519516 + B3 SINE B2 165 214 -2 3 819 511 342 59 53 chr17 30753180 30753517 -64519134 - MLT1C LTR MaLR -124 343 5 3 819 643 149 18 0 chr17 30753583 30753697 -64518954 + B1_Mur3 SINE Alu 34 149 0 3 819 597 64 0 0 chr17 30753702 30753780 -64518871 + (GGAA)n Simple_repeat Simple_repeat 2 79 0 3 819 217 200 40 0 chr17 30753808 30753858 -64518793 + GA-rich Low_complexity Low_complexity 1 52 0 3 819 588 258 104 6 chr17 30753860 30754024 -64518627 + MTE2b LTR MaLR 1 180 -199 3 819 290 244 30 34 chr17 30754046 30754123 -64518528 - MTE2b LTR MaLR -80 299 225 3 819 535 81 0 0 chr17 30754140 30754214 -64518437 - B1_Mur4 SINE Alu -2 148 75 4 819 744 65 0 0 chr17 30754214 30754321 -64518330 + (TC)n Simple_repeat Simple_repeat 2 108 0 4 819 414 0 0 0 chr17 30754327 30754373 -64518278 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 819 1974 111 12 45 chr17 30754373 30754543 -64518108 - ORR1A4 LTR MaLR -9 320 152 4 819 1123 109 21 16 chr17 30754543 30754755 -64517896 - L1_Mus3 LINE L1 0 6638 6438 4 819 1974 111 12 45 chr17 30754755 30754914 -64517737 - ORR1A4 LTR MaLR -178 151 2 4 819 297 0 0 0 chr17 30754916 30754949 -64517702 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 819 611 269 60 60 chr17 30754991 30755173 -64517478 + B3A SINE B2 11 192 -6 4 819 1005 78 0 0 chr17 30755197 30755325 -64517326 + B1_Mus1 SINE Alu 15 142 -6 4 819 1139 119 80 0 chr17 30755753 30755929 -64516722 - B2_Mm2 SINE B2 -3 192 3 4 819 536 265 92 13 chr17 30756014 30756167 -64516484 - MTE2b LTR MaLR -114 265 101 3 819 351 0 0 0 chr17 30756167 30756206 -64516445 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 819 8683 158 52 82 chr17 30756330 30758049 -64514602 - RLTR22_Mur LTR ERVK 0 1848 165 4 819 1045 124 0 0 chr17 30758049 30758194 -64514457 - B1_Mus2 SINE Alu -2 145 1 4 819 8683 158 52 82 chr17 30758194 30758379 -64514272 - RLTR22_Mur LTR ERVK -1684 164 1 4 819 497 249 38 146 chr17 30758490 30758702 -64513949 - B3A SINE B2 0 198 1 4 819 229 279 0 132 chr17 30759318 30759409 -64513242 - MER50B LTR ERV1 -42 655 577 4 819 915 256 105 23 chr17 30759761 30760065 -64512586 - MTE2b LTR MaLR -30 349 21 4 819 1036 147 22 17 chr17 30760410 30760590 -64512061 + B2_Mm2 SINE B2 1 181 -14 4 819 561 63 0 0 chr17 30760603 30760682 -64511969 - L1_Mus2 LINE L1 -4 6562 6484 4 819 614 101 0 20 chr17 30761689 30761790 -64510861 + (GGGA)n Simple_repeat Simple_repeat 2 100 0 4 819 313 299 142 0 chr17 30761816 30761943 -64510708 + B3A SINE B2 13 157 -41 4 819 360 0 0 0 chr17 30761965 30762005 -64510646 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 819 1267 177 5 0 chr17 30762202 30762411 -64510240 - B3 SINE B2 -6 210 1 4 819 461 239 60 214 chr17 30762525 30762973 -64509678 + RMER10A LTR ERVL 12 390 -52 4 819 1061 137 32 27 chr17 30762973 30763130 -64509521 + B2_Mm1t SINE B2 2 155 -38 4 819 378 0 0 0 chr17 30763130 30763172 -64509479 + (TAAA)n Simple_repeat Simple_repeat 4 45 0 4 819 497 84 0 46 chr17 30763177 30763264 -64509387 - L1_Mus2 LINE L1 0 6566 6484 4 819 1061 137 32 27 chr17 30763264 30763287 -64509364 + B2_Mm1t SINE B2 164 188 -5 4 819 354 143 0 0 chr17 30764271 30764334 -64508317 + (GGGA)n Simple_repeat Simple_repeat 2 64 0 4 819 313 299 142 0 chr17 30764359 30764486 -64508165 + B3A SINE B2 13 157 -41 4 819 468 0 0 0 chr17 30764508 30764560 -64508091 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 819 1267 177 5 0 chr17 30764757 30764966 -64507685 - B3 SINE B2 -6 210 1 4 819 541 238 56 219 chr17 30765080 30765528 -64507123 + RMER10A LTR ERVL 12 385 -57 4 819 1639 32 0 0 chr17 30765528 30765714 -64506937 + B2_Mm1a SINE B2 2 187 -6 4 819 541 238 56 219 chr17 30765714 30765749 -64506902 + RMER10A LTR ERVL 386 416 -26 4 819 366 23 0 0 chr17 30766055 30766098 -64506553 + (TC)n Simple_repeat Simple_repeat 2 44 0 4 819 571 163 39 0 chr17 30766098 30766210 -64506441 - B1_Mur4 SINE Alu -30 120 2 4 819 894 84 2 18 chr17 30766278 30766425 -64506226 - B2_Mm2 SINE B2 -3 192 47 4 819 26 30 0 0 chr17 30766428 30766461 -64506190 + AT_rich Low_complexity Low_complexity 1 33 0 4 819 24 0 0 0 chr17 30766524 30766548 -64506103 + AT_rich Low_complexity Low_complexity 1 24 0 4 819 495 312 0 18 chr17 30766579 30766742 -64505909 - RSINE1 SINE B4 -2 163 4 4 819 26 0 0 0 chr17 30767095 30767121 -64505530 + AT_rich Low_complexity Low_complexity 1 26 0 4 819 740 228 0 39 chr17 30767121 30767276 -64505375 - B1_Mur2 SINE Alu 0 149 1 4 819 369 89 321 9 chr17 30767302 30767414 -64505237 - B2_Mm2 SINE B2 -2 193 47 4 819 996 120 7 0 chr17 30767418 30767568 -64505083 - B2_Mm1a SINE B2 -41 152 2 4 819 213 132 0 0 chr17 30767568 30767606 -64505045 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 4 819 1220 55 0 0 chr17 30767685 30767831 -64504820 - B1_Mm SINE Alu 0 147 2 4 819 324 0 0 0 chr17 30767895 30767931 -64504720 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 819 398 191 32 0 chr17 30767968 30768062 -64504589 + GA-rich Low_complexity Low_complexity 3 99 0 4 819 913 145 23 0 chr17 30768076 30768248 -64504403 + GA-rich Low_complexity Low_complexity 3 178 0 4 819 246 135 0 0 chr17 30768249 30768286 -64504365 + (GA)n Simple_repeat Simple_repeat 2 38 0 4 819 704 275 7 0 chr17 30768293 30768442 -64504209 - B3 SINE B2 -66 150 1 4 819 716 251 38 28 chr17 30768504 30768717 -64503934 + B3 SINE B2 2 216 0 4 819 275 71 24 0 chr17 30769161 30769203 -64503448 + (TC)n Simple_repeat Simple_repeat 2 44 0 4 819 270 0 0 0 chr17 30769203 30769233 -64503418 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 819 283 307 26 0 chr17 30769247 30769349 -64503302 - B1F SINE Alu -42 107 2 4 819 260 271 17 0 chr17 30769379 30769438 -64503213 - ID4 SINE ID 0 83 24 4 819 261 0 0 0 chr17 30769468 30769497 -64503154 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 4 819 583 233 39 8 chr17 30769497 30769627 -64503024 - B1_Mur2 SINE Alu -13 136 3 4 819 484 296 0 0 chr17 30769670 30769778 -64502873 - PB1D10 SINE Alu -8 109 2 4 819 622 226 140 48 chr17 30769825 30770011 -64502640 - B3 SINE B2 -5 211 9 4 819 592 304 46 17 chr17 30770017 30770191 -64502460 - B3A SINE B2 -5 193 15 4 819 299 304 49 56 chr17 30770292 30770318 -64502333 - B1_Mus1 SINE Alu -1 147 126 4 819 4624 111 23 48 chr17 30770318 30770891 -64501760 - RMER6A LTR ERVK 0 756 198 4 819 1266 21 7 0 chr17 30770891 30771035 -64501616 + B1_Mm SINE Alu 2 146 -1 4 819 4624 111 23 48 chr17 30771035 30771236 -64501415 - RMER6A LTR ERVK -559 197 1 4 819 443 261 54 9 chr17 30771236 30771348 -64501303 - ID_B1 SINE B4 -18 206 90 4 819 1184 48 0 39 chr17 30771427 30771580 -64501071 - B1_Mm SINE Alu 0 147 1 4 819 1339 245 72 36 chr17 30771799 30772185 -64500466 - MTD LTR MaLR 0 419 20 4 819 273 98 0 0 chr17 30773066 30773107 -64499544 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 819 255 260 14 14 chr17 30773367 30773441 -64499210 + CT-rich Low_complexity Low_complexity 2 75 0 4 819 325 157 0 90 chr17 30773453 30773586 -64499065 + CT-rich Low_complexity Low_complexity 3 123 0 4 819 742 261 242 7 chr17 30774257 30774550 -64498101 - ORR1D2 LTR MaLR 0 370 9 4 819 2122 81 16 160 chr17 30774555 30774937 -64497714 - ORR1A2 LTR MaLR 0 327 1 4 819 2706 131 104 15 chr17 30775229 30775710 -64496941 - RLTR28 LTR ERVL 0 524 1 4 819 1150 278 56 61 chr17 30775768 30776194 -64496457 - BGLII_B LTR ERVK -17 424 1 4 819 505 287 155 73 chr17 30776200 30776542 -64496109 - ORR1D2 LTR MaLR 0 370 1 4 819 369 145 0 0 chr17 30776560 30776622 -64496029 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 819 289 260 36 91 chr17 30776734 30776844 -64495807 + LTR33 LTR ERVL 28 131 -384 4 819 265 239 42 29 chr17 30776901 30776992 -64495659 - B4A SINE B4 0 292 219 4 819 548 291 65 45 chr17 30777002 30777154 -64495497 - B3 SINE B2 -6 210 56 4 819 300 169 108 72 chr17 30777154 30777237 -64495414 + B4 SINE B4 3 88 -204 4 819 416 82 27 0 chr17 30777238 30777311 -64495340 + (CAAAC)n Simple_repeat Simple_repeat 2 76 0 4 819 696 275 49 24 chr17 30777313 30777518 -64495133 + B4 SINE B4 83 292 0 4 819 266 232 0 0 chr17 30778110 30778166 -64494485 + PB1 SINE Alu 53 108 -19 4 819 268 292 0 0 chr17 30778166 30778231 -64494420 + CT-rich Low_complexity Low_complexity 4 68 0 4 819 298 291 92 25 chr17 30778231 30778351 -64494300 - B1F SINE Alu -14 135 8 4 819 366 333 12 89 chr17 30778421 30778476 -64494175 + B4A SINE B4 44 97 -195 4 819 1127 82 7 0 chr17 30778476 30778622 -64494029 + B1_Mus1 SINE Alu 2 148 0 4 819 366 333 12 89 chr17 30778622 30778813 -64493838 + B4A SINE B4 98 271 -21 4 819 351 0 0 0 chr17 30778849 30778888 -64493763 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 819 1081 199 255 26 chr17 30778940 30779281 -64493370 + MTD LTR MaLR 1 419 0 4 819 2477 74 12 6 chr17 30779282 30779607 -64493044 - ORR1A2 LTR MaLR 0 327 1 4 819 279 79 0 0 chr17 30779724 30779762 -64492889 + (TCC)n Simple_repeat Simple_repeat 2 39 0 4 819 960 123 7 33 chr17 30779782 30779933 -64492718 - B1_Mus2 SINE Alu 0 147 1 4 819 509 266 0 30 chr17 30779938 30780070 -64492581 - ID_B1 SINE B4 -1 223 96 4 819 1512 63 0 5 chr17 30780523 30780713 -64491938 + B2_Mm2 SINE B2 1 189 -6 4 819 434 252 138 41 chr17 30780720 30780865 -64491786 + RSINE1 SINE B4 1 159 -6 4 819 261 0 0 0 chr17 30781250 30781279 -64491372 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 819 281 317 65 24 chr17 30781309 30781432 -64491219 - B4 SINE B4 -6 286 159 4 819 297 0 0 0 chr17 30781658 30781691 -64490960 + (T)n Simple_repeat Simple_repeat 1 33 0 4 819 1721 21 0 0 chr17 30781691 30781884 -64490767 - B2_Mm1a SINE B2 0 193 1 4 819 333 140 0 0 chr17 30782075 30782125 -64490526 - ID_B1 SINE B4 -1 223 174 4 819 312 172 0 0 chr17 30782126 30782184 -64490467 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 819 229 212 107 48 chr17 30782184 30782268 -64490383 + LTR50 LTR ERVL 151 239 -556 4 819 1492 204 102 6 chr17 30782255 30782619 -64490032 - MTD LTR MaLR -14 405 7 4 819 285 222 0 29 chr17 30783391 30783493 -64489158 + C-rich Low_complexity Low_complexity 5 103 0 4 819 212 319 0 0 chr17 30783494 30783563 -64489088 - ID2 SINE ID -13 70 2 4 819 418 283 31 55 chr17 30783570 30783697 -64488954 - PB1 SINE Alu -3 124 1 5 819 478 326 35 7 chr17 30783848 30783990 -64488661 + B3A SINE B2 44 189 -9 5 819 1655 42 0 0 chr17 30784111 30784302 -64488349 + B2_Mm1a SINE B2 1 191 -2 5 819 216 0 0 0 chr17 30784311 30784335 -64488316 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 5 819 610 175 70 62 chr17 30784360 30784488 -64488163 - B1_Mus2 SINE Alu -16 131 3 5 819 908 186 99 16 chr17 30785798 30785989 -64486662 + B3 SINE B2 4 210 -6 5 819 438 268 156 47 chr17 30786098 30786181 -64486470 - ID_B1 SINE B4 -1 223 134 5 819 1157 55 0 14 chr17 30786181 30786328 -64486323 - B1_Mus1 SINE Alu 0 148 4 5 819 438 268 156 47 chr17 30786328 30786436 -64486215 - ID_B1 SINE B4 -91 133 11 5 819 395 254 186 69 chr17 30786813 30787194 -64485457 - RLTR12A LTR ERVK 0 568 112 5 819 572 302 31 0 chr17 30787232 30787391 -64485260 + B4A SINE B4 3 166 -126 5 819 696 247 40 13 chr17 30787512 30787664 -64484987 + B4 SINE B4 116 271 -21 5 819 602 184 21 11 chr17 30787918 30788067 -64484584 - ORR1B2 LTR MaLR -204 142 1 5 819 669 259 18 31 chr17 30788067 30788230 -64484421 + B3A SINE B2 38 198 0 5 819 320 292 14 0 chr17 30788575 30788647 -64484004 + ID4 SINE ID 2 74 -9 5 819 867 175 3 5 chr17 30788649 30789389 -64483262 + (CA)n Simple_repeat Simple_repeat 1 738 0 5 819 603 233 61 6 chr17 30789415 30789579 -64483072 - MTE2a LTR MaLR -185 194 22 5 819 335 404 80 40 chr17 30789607 30789857 -64482794 - L1M5 LINE L1 -674 5566 5307 5 819 295 259 23 12 chr17 30790020 30790106 -64482545 - B3 SINE B2 -4 212 126 5 819 401 290 129 13 chr17 30790476 30790638 -64482013 - B3A SINE B2 -37 179 2 5 819 653 274 44 16 chr17 30790646 30790828 -64481823 - B4 SINE B4 -105 187 1 5 819 345 264 53 46 chr17 30790832 30790983 -64481668 - L1MA4 LINE L1 -117 6183 6032 5 819 527 208 138 32 chr17 30791230 30791419 -64481232 + B3 SINE B2 4 212 -4 5 819 818 214 70 61 chr17 30791545 30791759 -64480892 - B3 SINE B2 0 216 1 5 819 585 282 16 78 chr17 30791967 30792159 -64480492 - MTE-int LTR MaLR -1400 180 1 5 819 830 210 10 62 chr17 30792754 30792962 -64479689 + B3A SINE B2 2 198 0 5 819 1401 57 45 0 chr17 30792982 30793159 -64479492 - B2_Mm2 SINE B2 -9 186 2 5 819 780 200 39 89 chr17 30793160 30793363 -64479288 - B2_Mm2 SINE B2 -1 194 2 5 819 527 262 12 12 chr17 30794013 30794175 -64478476 - RSINE1 SINE B4 -1 164 3 5 819 392 195 0 58 chr17 30794223 30794310 -64478341 - ID_B1 SINE B4 -25 199 118 5 819 21 0 0 0 chr17 30794399 30794420 -64478231 + AT_rich Low_complexity Low_complexity 1 21 0 5 819 895 195 78 10 chr17 30794420 30794612 -64478039 - B3 SINE B2 -10 206 2 5 819 694 306 5 9 chr17 30795531 30795749 -64476902 + ID_B1 SINE B4 2 218 -6 5 819 221 0 35 0 chr17 30796129 30796158 -64476493 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 5 819 180 49 71 24 chr17 30796159 30796201 -64476450 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 5 819 2097 112 38 9 chr17 30796372 30796688 -64475963 - ORR1A2 LTR MaLR -2 325 1 5 819 1120 284 78 51 chr17 30796692 30797164 -64475487 - Lx8 LINE L1 -98 7375 6891 5 819 2683 95 52 18 chr17 30797165 30797552 -64475099 - MTB LTR MaLR 0 400 1 5 819 475 235 18 80 chr17 30797589 30797777 -64474874 - RMER4B LTR ERVK -23 588 327 5 819 442 210 0 16 chr17 30797822 30797948 -64474703 + CT-rich Low_complexity Low_complexity 2 125 0 5 819 309 294 82 27 chr17 30797950 30798097 -64474554 - HAL1-3A_ME LINE L1 -420 2438 2284 5 819 264 167 42 0 chr17 30798097 30798169 -64474482 + CT-rich Low_complexity Low_complexity 3 77 0 5 819 603 201 190 54 chr17 30798197 30798402 -64474249 - RMER4B LTR ERVK -338 247 15 5 819 226 295 242 0 chr17 30798406 30798501 -64474150 - Lx8 LINE L1 -591 6882 6765 5 819 402 39 0 0 chr17 30798686 30798738 -64473913 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 819 533 15 15 0 chr17 30799444 30799510 -64473141 + (TC)n Simple_repeat Simple_repeat 1 67 0 5 819 2268 66 0 0 chr17 30799674 30799960 -64472691 - MTB_Mm LTR MaLR 0 407 122 5 819 691 133 0 0 chr17 30799963 30800068 -64472583 - RMER19A LTR ERVK -632 105 1 5 819 1126 157 29 14 chr17 30800561 30800768 -64471883 - B3 SINE B2 -4 212 3 5 819 240 268 0 0 chr17 30800868 30800924 -64471727 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 819 1842 152 48 14 chr17 30801114 30801542 -64471109 - ORR1B2 LTR MaLR 0 394 6 5 819 237 208 0 20 chr17 30801545 30801594 -64471057 - B4 SINE B4 -224 68 21 5 819 207 0 0 0 chr17 30801614 30801637 -64471014 + (T)n Simple_repeat Simple_repeat 1 23 0 5 102 2561 136 31 2 chr17 30801766 30802179 -64470472 - RLTR20B1 LTR ERVK -138 425 1 5 820 1607 27 5 0 chr17 30802187 30802371 -64470280 - B2_Mm1t SINE B2 -7 186 2 5 820 2650 182 66 11 chr17 30802375 30802937 -64469714 - MYSERV16_I-int LTR ERVK 0 2326 1734 5 820 1125 192 14 5 chr17 30803262 30803471 -64469180 - B3 SINE B2 -1 215 5 5 820 227 261 0 21 chr17 30803553 30803600 -64469051 - ID4_ SINE ID -30 53 8 5 820 464 319 0 28 chr17 30803615 30803757 -64468894 - ID_B1 SINE B4 -2 222 85 5 820 1035 101 18 0 chr17 30804013 30804181 -64468470 + (TTTTC)n Simple_repeat Simple_repeat 3 173 0 5 820 213 158 26 0 chr17 30804219 30804257 -64468394 - ID4_ SINE ID -43 40 2 5 820 352 319 0 26 chr17 30804261 30804377 -64468274 - PB1D10 SINE Alu -4 113 1 5 820 347 270 0 0 chr17 30805352 30805426 -64467225 + B4 SINE B4 12 85 -207 5 820 713 174 6 27 chr17 30805435 30805618 -64467033 + GA-rich Low_complexity Low_complexity 2 180 0 5 820 799 259 10 36 chr17 30805641 30805837 -64466814 + B4 SINE B4 102 292 0 5 820 749 90 9 0 chr17 30805880 30805991 -64466660 + (CA)n Simple_repeat Simple_repeat 1 112 0 5 820 281 250 65 111 chr17 30806124 30806232 -64466419 - PB1D10 SINE Alu -2 115 13 5 820 635 339 5 10 chr17 30806395 30806608 -64466043 + MTD LTR MaLR 1 210 -209 5 820 352 148 138 64 chr17 30806612 30806706 -64465945 + MTD LTR MaLR 319 419 0 5 820 243 88 0 0 chr17 30806890 30806924 -64465727 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 820 363 113 0 0 chr17 30806934 30806996 -64465655 + (CAGA)n Simple_repeat Simple_repeat 2 63 0 5 820 1245 78 6 0 chr17 30807851 30808005 -64464646 + B2_Mm2 SINE B2 1 155 -40 5 820 282 29 0 0 chr17 30808005 30808040 -64464611 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 5 820 1245 78 6 0 chr17 30808040 30808051 -64464600 + B2_Mm2 SINE B2 156 166 -29 5 820 311 331 126 70 chr17 30808236 30808506 -64464145 - ORR1E LTR MaLR -32 327 43 5 820 881 275 40 7 chr17 30808529 30808807 -64463844 + B4A SINE B4 1 287 -5 5 820 525 32 0 0 chr17 30808850 30808913 -64463738 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 820 896 267 0 16 chr17 30810044 30810238 -64462413 + B3A SINE B2 8 198 0 5 820 333 297 79 55 chr17 30810998 30811162 -64461489 + B4 SINE B4 48 215 -77 5 820 521 215 79 36 chr17 30811717 30811847 -64460804 + B1_Mur1 SINE Alu 2 139 -10 5 820 248 0 0 30 chr17 30811847 30811880 -64460771 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 5 820 592 229 7 54 chr17 30811920 30812068 -64460583 + RSINE1 SINE B4 3 143 -22 5 820 1285 141 11 0 chr17 30812367 30812558 -64460093 + B3 SINE B2 1 193 -23 5 820 387 0 0 0 chr17 30812560 30812603 -64460048 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 820 396 0 0 0 chr17 30812685 30812729 -64459922 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 5 820 383 306 46 0 chr17 30812748 30812856 -64459795 - RSINE1 SINE B4 -10 155 43 5 820 527 288 8 0 chr17 30813015 30813147 -64459504 + ID_B1 SINE B4 90 222 -2 5 820 854 275 94 120 chr17 30813204 30813279 -64459372 + MTD LTR MaLR 5 103 -316 5 820 222 37 0 0 chr17 30813279 30813306 -64459345 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 820 854 275 94 120 chr17 30813306 30813656 -64458995 + MTD LTR MaLR 104 418 -1 5 820 927 147 271 0 chr17 30813693 30813863 -64458788 + B3 SINE B2 1 216 0 5 820 515 218 7 0 chr17 30814261 30814408 -64458243 + (TG)n Simple_repeat Simple_repeat 1 148 0 5 820 281 298 6 0 chr17 30814440 30814618 -64458033 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 820 780 159 78 78 chr17 30814671 30814862 -64457789 - B2_Mm2 SINE B2 -4 191 1 5 820 312 338 48 8 chr17 30814867 30814997 -64457654 - B4A SINE B4 -94 198 67 5 820 1010 60 82 0 chr17 30815011 30815145 -64457506 - B1_Mm SINE Alu 0 147 3 5 820 444 67 0 0 chr17 30815181 30815241 -64457410 + (CAT)n Simple_repeat Simple_repeat 2 61 0 5 820 327 207 0 17 chr17 30815241 30815294 -64457357 - B4A SINE B4 -213 79 27 5 820 1262 41 0 0 chr17 30815322 30815469 -64457182 - B1_Mus2 SINE Alu 0 147 1 5 820 234 0 0 0 chr17 30815488 30815514 -64457137 + (T)n Simple_repeat Simple_repeat 1 26 0 5 820 530 211 0 9 chr17 30815573 30815678 -64456973 + B1_Mur4 SINE Alu 1 104 -46 5 820 558 259 16 105 chr17 30815680 30815870 -64456781 - B3A SINE B2 -25 173 1 5 820 680 252 14 7 chr17 30816193 30816341 -64456310 + B1_Mur2 SINE Alu 1 149 0 5 820 1570 52 0 5 chr17 30816391 30816586 -64456065 + B2_Mm2 SINE B2 2 195 0 5 820 536 245 160 6 chr17 30816645 30816801 -64455850 + B3A SINE B2 1 180 -18 5 820 231 245 0 0 chr17 30817440 30817493 -64455158 + Lx8 LINE L1 7416 7468 -5 5 820 472 211 53 0 chr17 30817514 30817609 -64455042 + B3A SINE B2 2 101 -97 5 820 291 235 77 66 chr17 30817739 30817830 -64454821 - RLTR19C LTR ERVK -381 125 34 5 820 268 228 0 50 chr17 30817866 30817926 -64454725 - B1_Mus1 SINE Alu -90 58 2 5 820 268 303 20 0 chr17 30817962 30818061 -64454590 - L1M4 LINE L1 -1031 5115 5015 6 820 1179 61 0 0 chr17 30818334 30818482 -64454169 + B1_Mus1 SINE Alu 1 148 0 6 820 234 116 0 0 chr17 30818488 30818531 -64454120 + (A)n Simple_repeat Simple_repeat 1 43 0 6 820 471 224 250 12 chr17 30818687 30818859 -64453792 + B3 SINE B2 1 213 -3 6 820 3567 76 10 15 chr17 30818864 30819345 -64453306 - L1_Mus1 LINE L1 -228 6338 5860 6 820 1596 52 90 0 chr17 30819345 30819556 -64453095 + L1_Mus1 LINE L1 6338 6567 0 6 820 336 24 0 0 chr17 30819909 30819950 -64452701 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 820 671 307 0 0 chr17 30819954 30820120 -64452531 - B3A SINE B2 -32 166 1 6 820 337 181 241 0 chr17 30820161 30820244 -64452407 + PB1D10 SINE Alu 14 116 -1 6 820 230 136 23 0 chr17 30820781 30820825 -64451826 + CT-rich Low_complexity Low_complexity 4 48 0 6 820 640 264 40 45 chr17 30821287 30821485 -64451166 + B3A SINE B2 2 198 0 6 820 623 284 89 64 chr17 30821652 30821934 -64450717 + B4A SINE B4 4 292 0 6 820 492 218 0 0 chr17 30821968 30822147 -64450504 + (CA)n Simple_repeat Simple_repeat 2 180 0 6 820 358 244 6 6 chr17 30822188 30822361 -64450290 + (CA)n Simple_repeat Simple_repeat 2 174 0 6 820 471 244 0 0 chr17 30822386 30822647 -64450004 + (CA)n Simple_repeat Simple_repeat 1 261 0 6 820 350 276 0 71 chr17 30822657 30822770 -64449881 + HAL1-3A_ME LINE L1 1976 2080 -778 6 820 274 346 52 15 chr17 30822912 30823047 -64449604 + MIRb SINE MIR 16 155 -113 6 820 354 61 0 0 chr17 30823733 30823782 -64448869 + (CTTG)n Simple_repeat Simple_repeat 2 50 0 6 820 879 122 0 22 chr17 30823784 30823968 -64448683 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 6 820 588 136 107 0 chr17 30823972 30824075 -64448576 - B1_Mur1 SINE Alu -15 134 21 6 820 225 0 0 0 chr17 30824451 30824476 -64448175 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 820 383 221 17 0 chr17 30824512 30824649 -64448002 - B3 SINE B2 -10 206 2 6 820 180 0 0 0 chr17 30824828 30824848 -64447803 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 820 3091 185 121 84 chr17 30824990 30825412 -64447239 - RMER17B LTR ERVK -122 786 370 6 820 329 0 0 24 chr17 30825412 30825454 -64447197 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 820 3091 160 126 68 chr17 30825454 30825850 -64446801 - RMER17B LTR ERVK -524 434 1 6 820 386 152 59 29 chr17 30825850 30825952 -64446699 + Lx6 LINE L1 7341 7445 -15 6 820 1036 244 150 25 chr17 30826208 30826561 -64446090 + MTD-int LTR MaLR 857 1253 -5 6 820 1510 217 96 8 chr17 30826566 30826942 -64445709 + MTD LTR MaLR 1 409 -10 6 820 491 325 72 0 chr17 30827316 30827525 -64445126 - MER68 LTR ERVL -322 241 18 6 820 659 215 6 0 chr17 30827525 30827697 -64444954 + (TG)n Simple_repeat Simple_repeat 1 173 0 6 820 228 111 0 0 chr17 30827747 30827783 -64444868 + (T)n Simple_repeat Simple_repeat 1 36 0 6 820 1095 90 7 0 chr17 30827784 30827929 -64444722 - B1_Mus2 SINE Alu -1 146 1 6 820 533 214 130 87 chr17 30828156 30828340 -64444311 - B3A SINE B2 -1 194 3 6 820 507 157 0 0 chr17 30829097 30829186 -64443465 + GA-rich Low_complexity Low_complexity 4 92 0 6 820 244 273 114 0 chr17 30829378 30829466 -64443185 + MER20 DNA MER1_type 122 219 0 6 820 414 69 0 0 chr17 30829630 30829688 -64442963 + (CA)n Simple_repeat Simple_repeat 2 59 0 6 820 341 274 0 14 chr17 30829717 30829791 -64442860 - B4 SINE B4 -4 288 216 6 820 379 256 30 104 chr17 30829832 30829967 -64442684 - RSINE1 SINE B4 -29 136 12 6 820 729 318 14 40 chr17 30829990 30830002 -64442649 - B4 SINE B4 -69 223 214 6 820 450 0 0 0 chr17 30830002 30830052 -64442599 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 6 820 729 318 14 40 chr17 30830052 30830262 -64442389 - B4 SINE B4 -79 213 7 6 820 254 234 12 99 chr17 30830393 30830441 -64442210 + ORR1B1-int LTR MaLR 613 646 -863 6 820 834 171 0 0 chr17 30830441 30830570 -64442081 + B1_Mur4 SINE Alu 2 130 -20 6 820 727 186 110 35 chr17 30830587 30830787 -64441864 + B3 SINE B2 2 216 0 6 820 248 147 29 69 chr17 30832308 30832410 -64440241 + (TATAA)n Simple_repeat Simple_repeat 2 99 0 6 820 221 245 0 0 chr17 30832542 30832595 -64440056 + GA-rich Low_complexity Low_complexity 2 54 0 6 820 255 103 0 0 chr17 30832604 30832643 -64440008 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 820 1946 238 5 10 chr17 30832652 30833060 -64439591 - MT2A LTR ERVL -71 462 57 6 820 1858 126 108 3 chr17 30833087 30833382 -64439269 - ORR1A3 LTR MaLR 0 326 1 6 820 219 262 0 0 chr17 30833401 30833443 -64439208 - B1F2 SINE Alu -90 59 18 6 820 234 0 0 0 chr17 30834438 30834464 -64438187 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 6 820 210 71 0 0 chr17 30834464 30834492 -64438159 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 6 820 2637 135 0 73 chr17 30834513 30834976 -64437675 - Lx4A LINE L1 -2 7056 6628 6 820 513 159 107 57 chr17 30835311 30835451 -64437200 + B1F1 SINE Alu 3 149 0 6 820 277 274 16 0 chr17 30835455 30835517 -64437134 + ID4_ SINE ID 3 65 -18 6 820 1030 140 115 43 chr17 30835615 30835824 -64436827 + URR1A DNA MER1_type 2 225 -1 6 820 509 289 22 7 chr17 30836777 30836913 -64435738 - Lx8 LINE L1 -341 7132 6995 6 820 1285 71 0 6 chr17 30836986 30837157 -64435494 - B2_Mm2 SINE B2 -25 170 1 6 820 250 258 15 0 chr17 30837157 30837223 -64435428 - Lx8 LINE L1 -448 7025 6959 6 820 23 0 0 0 chr17 30837520 30837543 -64435108 + AT_rich Low_complexity Low_complexity 1 23 0 6 820 629 261 42 37 chr17 30837601 30837625 -64435026 - B3A SINE B2 0 198 177 6 820 330 26 0 0 chr17 30837625 30837664 -64434987 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 820 629 261 42 37 chr17 30837664 30837830 -64434821 - B3A SINE B2 -22 176 8 6 820 1359 96 16 0 chr17 30837846 30838034 -64434617 - B2_Mm2 SINE B2 -2 193 3 6 820 279 257 14 14 chr17 30838094 30838165 -64434486 + ID4 SINE ID 2 72 -11 6 820 868 196 29 11 chr17 30839045 30839220 -64433431 - B3A SINE B2 -20 178 1 6 820 385 160 16 23 chr17 30839248 30839376 -64433275 + (TA)n Simple_repeat Simple_repeat 1 127 0 6 820 256 172 28 51 chr17 30839414 30839592 -64433059 + (TA)n Simple_repeat Simple_repeat 1 174 0 6 820 290 179 14 36 chr17 30839642 30839781 -64432870 + (TA)n Simple_repeat Simple_repeat 1 136 0 6 820 615 265 7 14 chr17 30839795 30839933 -64432718 - ID_B1 SINE B4 -7 217 81 6 820 639 184 200 33 chr17 30840251 30840431 -64432220 - B3 SINE B2 -6 210 1 6 820 1439 86 16 0 chr17 30840714 30840901 -64431750 - B2_Mm2 SINE B2 -4 191 2 6 820 441 0 0 0 chr17 30840925 30840974 -64431677 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 820 650 209 14 54 chr17 30841034 30841181 -64431470 + ID_B1 SINE B4 82 222 -2 6 820 531 321 45 6 chr17 30841218 30841375 -64431276 + RSINE1 SINE B4 1 163 -2 6 820 225 184 0 0 chr17 30841397 30841446 -64431205 + (TA)n Simple_repeat Simple_repeat 1 49 0 6 820 462 299 0 0 chr17 30841454 30841551 -64431100 + RSINE1 SINE B4 2 98 -67 6 820 242 192 164 0 chr17 30842028 30842101 -64430550 - RMER15 LTR ERVL -69 506 422 6 820 2013 108 4 125 chr17 30842691 30843076 -64429575 - ORR1A4 LTR MaLR -10 319 1 6 820 549 322 17 17 chr17 30844067 30844241 -64428410 - ID_B1 SINE B4 0 224 51 6 820 379 340 58 45 chr17 30844242 30844396 -64428255 + B3A SINE B2 43 198 0 6 820 813 166 14 20 chr17 30844869 30845017 -64427634 + B1_Mus1 SINE Alu 1 147 -1 6 820 297 264 17 78 chr17 30845591 30845706 -64426945 - RLTR25B LTR ERVK -480 548 441 6 820 766 110 25 25 chr17 30845604 30845725 -64426926 - B1_Mus2 SINE Alu -8 142 21 6 820 235 150 25 0 chr17 30846333 30846373 -64426278 - ORR1D2 LTR MaLR -3 367 327 6 820 738 181 33 40 chr17 30846373 30846523 -64426128 + B1_Mur3 SINE Alu 1 149 0 6 820 1441 221 63 9 chr17 30846546 30846862 -64425789 - ORR1D2 LTR MaLR -35 335 3 6 820 587 319 54 20 chr17 30847707 30848005 -64424646 - L1MB8 LINE L1 -72 6106 5799 6 820 383 287 48 79 chr17 30848001 30848228 -64424423 - L1MB8 LINE L1 -745 5401 5182 6 820 210 299 14 69 chr17 30848235 30848307 -64424344 - ID4 SINE ID -2 81 14 6 820 2071 103 27 108 chr17 30848394 30848840 -64423811 - RMER17C LTR ERVK 0 410 1 6 820 467 267 34 20 chr17 30848853 30849002 -64423649 - L1MB8 LINE L1 -1016 5130 4980 6 820 583 293 18 12 chr17 30849601 30849770 -64422881 + B3A SINE B2 1 170 -28 6 820 414 108 0 0 chr17 30849798 30849872 -64422779 + (CA)n Simple_repeat Simple_repeat 2 75 0 6 820 249 342 0 0 chr17 30850184 30850260 -64422391 + (TG)n Simple_repeat Simple_repeat 1 76 0 6 820 527 277 31 106 chr17 30850268 30850494 -64422157 - B4 SINE B4 0 292 84 6 820 203 302 0 0 chr17 30850525 30850578 -64422073 + CT-rich Low_complexity Low_complexity 4 56 0 6 820 981 255 14 9 chr17 30851039 30851253 -64421398 + B3 SINE B2 2 216 0 6 820 190 266 190 0 chr17 30851461 30851540 -64421111 - L2c LINE L2 -213 3174 3081 6 820 833 222 9 159 chr17 30851762 30851982 -64420669 + B3A SINE B2 8 198 0 6 820 1095 264 108 10 chr17 30852663 30852958 -64419693 + MTE2a LTR MaLR 1 324 -55 6 820 522 185 191 7 chr17 30852947 30853094 -64419557 + MTE2b LTR MaLR 206 379 0 6 820 305 280 63 103 chr17 30853112 30853335 -64419316 - RLTR21 LTR ERVK -318 1254 1041 6 820 366 230 0 0 chr17 30853494 30853568 -64419083 + ID4 SINE ID 1 74 -9 6 820 1192 43 0 0 chr17 30853934 30854072 -64418579 + B1_Mus1 SINE Alu 2 139 -9 6 820 315 0 0 0 chr17 30854072 30854107 -64418544 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 6 820 291 228 20 111 chr17 30854208 30854308 -64418343 - Looper DNA PiggyBac -1221 337 238 6 820 843 179 7 0 chr17 30854308 30854453 -64418198 + B1_Mur1 SINE Alu 1 146 -3 6 820 192 40 0 0 chr17 30854453 30854478 -64418173 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 6 820 291 228 20 111 chr17 30854478 30854529 -64418122 - Looper DNA PiggyBac -1321 237 200 6 820 771 218 0 149 chr17 30855228 30855449 -64417202 + B3A SINE B2 2 189 -6 6 820 928 240 47 0 chr17 30855467 30855659 -64416992 + B3 SINE B2 1 201 -15 6 820 534 222 34 14 chr17 30856111 30856257 -64416394 - B3A SINE B2 -2 196 48 6 820 439 278 38 72 chr17 30856275 30856533 -64416118 - L1MA6 LINE L1 0 6300 6051 6 820 466 285 50 114 chr17 30856688 30856719 -64415932 - B2_Mm2 SINE B2 -6 189 162 7 820 216 0 0 0 chr17 30856719 30856743 -64415908 + (TG)n Simple_repeat Simple_repeat 1 24 0 7 820 669 285 50 114 chr17 30856743 30856913 -64415738 - B3A SINE B2 -30 168 1 7 820 351 0 0 0 chr17 30856929 30856968 -64415683 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 820 568 172 10 20 chr17 30856968 30857060 -64415591 - B1F1 SINE Alu -8 141 50 7 820 735 251 105 25 chr17 30858487 30858687 -64413964 - B3 SINE B2 0 216 1 7 820 386 68 316 97 chr17 30859121 30859235 -64413416 - B2_Mm2 SINE B2 -10 185 47 7 820 1399 68 11 0 chr17 30859301 30859478 -64413173 - B2_Mm1t SINE B2 -14 179 1 7 820 396 269 9 9 chr17 30860042 30860147 -64412504 + PB1D10 SINE Alu 5 109 -8 7 820 420 282 67 7 chr17 30860353 30860503 -64412148 - RSINE1 SINE B4 -4 161 3 7 820 656 236 14 20 chr17 30860589 30860736 -64411915 + B3A SINE B2 8 153 -45 7 820 25 31 0 0 chr17 30860767 30860799 -64411852 + AT_rich Low_complexity Low_complexity 1 32 0 7 820 430 250 0 10 chr17 30861219 30861320 -64411331 + ID_B1 SINE B4 124 223 -1 7 820 225 262 33 0 chr17 30862355 30862416 -64410235 - MLT1C LTR MaLR 0 505 443 7 820 662 165 23 23 chr17 30862416 30862590 -64410061 + (CATATA)n Simple_repeat Simple_repeat 5 178 0 7 820 791 149 28 11 chr17 30862619 30862795 -64409856 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 7 820 308 323 94 105 chr17 30862820 30863183 -64409468 - MLT1C LTR MaLR -57 410 52 7 820 827 279 58 54 chr17 30863983 30864241 -64408410 + B4 SINE B4 34 292 0 7 820 347 307 42 35 chr17 30864607 30864749 -64407902 + B1F1 SINE Alu 1 143 -6 7 820 610 201 152 51 chr17 30864850 30865028 -64407623 - B3 SINE B2 -20 196 1 7 820 229 331 169 0 chr17 30865291 30865427 -64407224 + MIR3 SINE MIR 20 178 -30 7 820 976 214 0 37 chr17 30865477 30865666 -64406985 + B3A SINE B2 1 182 -16 7 820 282 162 0 70 chr17 30865685 30865771 -64406880 + (CATA)n Simple_repeat Simple_repeat 4 83 0 7 820 560 194 308 66 chr17 30866386 30866568 -64406083 + URR1A DNA MER1_type 1 226 0 7 820 24 0 0 0 chr17 30867099 30867123 -64405528 + AT_rich Low_complexity Low_complexity 1 24 0 7 820 205 131 33 0 chr17 30867480 30867541 -64405110 + A-rich Low_complexity Low_complexity 4 66 0 7 820 703 221 7 14 chr17 30868481 30868623 -64404028 - B1_Mur2 SINE Alu -8 141 1 7 820 2454 79 32 0 chr17 30868650 30868966 -64403685 - ORR1A2 LTR MaLR 0 327 2 7 820 546 16 0 0 chr17 30869121 30869184 -64403467 + (CA)n Simple_repeat Simple_repeat 2 64 0 7 820 571 293 70 40 chr17 30869658 30870034 -64402617 - ORR1E LTR MaLR -3 376 139 7 820 588 152 0 0 chr17 30870034 30870152 -64402499 + GA-rich Low_complexity Low_complexity 2 119 0 7 820 737 267 33 6 chr17 30870152 30870333 -64402318 - ORR1E LTR MaLR -168 191 6 7 820 361 269 74 16 chr17 30870426 30870547 -64402104 - MTE2a LTR MaLR -245 134 7 7 820 183 358 0 47 chr17 30870724 30870809 -64401842 + L4 LINE RTE 1363 1443 -586 7 820 229 322 125 59 chr17 30870818 30870970 -64401681 + MER5A1 DNA MER1_type 2 163 -3 7 820 608 256 47 42 chr17 30870970 30871182 -64401469 + B3 SINE B2 2 214 -2 7 820 236 406 79 7 chr17 30871308 30871447 -64401204 + L4 LINE RTE 1593 1741 -288 7 820 259 367 0 0 chr17 30871464 30871543 -64401108 + ID4_ SINE ID 1 79 -4 7 820 424 194 95 19 chr17 30871846 30871951 -64400700 - B3 SINE B2 -14 202 90 7 820 898 186 49 20 chr17 30872511 30872714 -64399937 - B3 SINE B2 0 216 8 7 820 458 189 140 9 chr17 30873520 30873627 -64399024 - B1F SINE Alu 0 149 29 7 820 325 254 100 43 chr17 30873627 30873660 -64398991 - ID_B1 SINE B4 0 224 77 7 820 518 244 41 69 chr17 30873664 30873809 -64398842 - B1_Mur1 SINE Alu 0 149 9 7 820 188 234 85 0 chr17 30873815 30873862 -64398789 - MIR SINE MIR -55 153 103 7 820 188 406 0 10 chr17 30873906 30874008 -64398643 + L2b LINE L2 3274 3374 -1 7 820 881 270 4 31 chr17 30875111 30875340 -64397311 + ID_B1 SINE B4 2 224 0 7 820 584 221 109 39 chr17 30876827 30876985 -64395666 - B3A SINE B2 -9 186 36 7 820 495 347 135 58 chr17 30877001 30877261 -64395390 - MLT1I LTR MaLR -60 351 72 7 820 311 89 0 43 chr17 30877396 30877443 -64395208 - HAL1-3A_ME LINE L1 -839 2019 1975 7 820 223 262 16 0 chr17 30877443 30877504 -64395147 + (TG)n Simple_repeat Simple_repeat 1 62 0 7 820 372 253 36 0 chr17 30877525 30877608 -64395043 - B4A SINE B4 -7 285 200 7 820 585 176 0 29 chr17 30877612 30877717 -64394934 - B3 SINE B2 -114 102 1 7 820 23 33 0 0 chr17 30877897 30877927 -64394724 + AT_rich Low_complexity Low_complexity 1 30 0 7 820 184 250 65 32 chr17 30878150 30878212 -64394439 - L3 LINE CR1 -3158 1331 1268 7 820 512 269 9 123 chr17 30878416 30878636 -64394015 - B3A SINE B2 0 198 4 7 820 1470 65 16 0 chr17 30878649 30878835 -64393816 - B2_Mm2 SINE B2 -5 190 2 7 820 480 278 190 24 chr17 30878965 30879334 -64393317 - L1MD2 LINE L1 -16 6343 5914 7 820 525 195 251 34 chr17 30879888 30880063 -64392588 - B3 SINE B2 -3 213 1 7 820 563 281 19 12 chr17 30880123 30880285 -64392366 - RSINE1 SINE B4 0 165 3 7 820 372 43 0 0 chr17 30880373 30880419 -64392232 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 820 481 210 6 6 chr17 30880451 30880464 -64392187 + (TG)n Simple_repeat Simple_repeat 1 14 0 7 820 492 18 0 0 chr17 30880464 30880521 -64392130 + (TTTC)n Simple_repeat Simple_repeat 2 58 0 7 820 1216 49 0 0 chr17 30880521 30880665 -64391986 - B1_Mus2 SINE Alu -3 144 1 7 820 481 210 6 6 chr17 30880665 30880827 -64391824 + (TG)n Simple_repeat Simple_repeat 2 162 0 7 820 291 202 9 18 chr17 30880842 30880953 -64391698 + (TG)n Simple_repeat Simple_repeat 2 111 0 7 820 709 205 37 112 chr17 30880957 30881171 -64391480 + B3A SINE B2 1 198 0 7 820 330 154 0 19 chr17 30881981 30882034 -64390617 - HAL1-3A_ME LINE L1 -833 2025 1974 7 820 784 228 131 119 chr17 30882102 30882641 -64390010 - RMER4A LTR ERVK -36 549 17 7 820 465 110 0 0 chr17 30882650 30882723 -64389928 + (TG)n Simple_repeat Simple_repeat 1 73 0 7 820 695 218 85 53 chr17 30882756 30882945 -64389706 - ID_B1 SINE B4 -28 196 2 7 820 265 326 145 21 chr17 30883120 30883355 -64389296 + LTR16A1 LTR ERVL 184 447 -9 7 820 871 275 0 144 chr17 30884419 30884738 -64387913 - B4 SINE B4 -5 287 15 7 820 674 262 7 0 chr17 30886610 30886751 -64385900 - RSINE1 SINE B4 -21 144 3 7 820 342 150 0 16 chr17 30886861 30886922 -64385729 - HAL1-3A_ME LINE L1 -824 2034 1975 7 820 346 210 14 28 chr17 30886976 30887118 -64385533 + (TATATG)n Simple_repeat Simple_repeat 2 141 0 7 820 326 271 82 8 chr17 30887712 30887846 -64384805 + L1M4 LINE L1 3099 3242 -2904 7 820 549 242 47 140 chr17 30887853 30888175 -64384476 + B4 SINE B4 1 292 0 7 820 237 33 0 0 chr17 30889268 30889298 -64383353 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 820 642 243 77 0 chr17 30889320 30889489 -64383162 - B3A SINE B2 -16 182 1 7 820 309 321 62 0 chr17 30889925 30890037 -64382614 - B3A SINE B2 -78 120 2 7 820 432 0 0 0 chr17 30890916 30890964 -64381687 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 820 205 364 27 0 chr17 30891017 30891127 -64381524 - L2 LINE L2 -978 2441 2329 7 820 945 118 14 27 chr17 30891493 30891641 -64381010 - B1_Mus1 SINE Alu -2 146 1 7 820 717 45 0 0 chr17 30892168 30892257 -64380394 + (TTTCC)n Simple_repeat Simple_repeat 1 89 0 7 820 216 95 19 120 chr17 30892257 30892365 -64380286 + CT-rich Low_complexity Low_complexity 1 97 0 7 820 765 0 0 0 chr17 30892365 30892450 -64380201 + (TTTC)n Simple_repeat Simple_repeat 1 85 0 7 820 1067 229 41 48 chr17 30892621 30892707 -64379944 + B4 SINE B4 2 83 -209 7 820 285 29 0 0 chr17 30892707 30892741 -64379910 + (CAA)n Simple_repeat Simple_repeat 2 35 0 7 820 1067 229 41 48 chr17 30892741 30892947 -64379704 + B4 SINE B4 84 292 0 7 820 186 191 0 0 chr17 30893039 30893081 -64379570 + (CATA)n Simple_repeat Simple_repeat 3 44 0 7 820 353 120 0 0 chr17 30893100 30893150 -64379501 + HAL1-3A_ME LINE L1 1976 2025 -833 7 820 901 222 9 96 chr17 30893796 30894015 -64378636 + B3 SINE B2 7 206 -10 7 820 965 261 72 18 chr17 30894177 30894454 -64378197 + B4A SINE B4 1 292 0 7 820 680 212 167 6 chr17 30894889 30895069 -64377582 + B3 SINE B2 2 210 -6 7 820 693 277 22 120 chr17 30895474 30895496 -64377155 - B4A SINE B4 0 292 271 7 820 369 0 0 0 chr17 30895496 30895537 -64377114 + (CA)n Simple_repeat Simple_repeat 1 41 0 7 820 693 277 22 120 chr17 30895537 30895838 -64376813 - B4A SINE B4 -22 270 1 7 820 538 133 38 23 chr17 30896363 30896494 -64376157 + C-rich Low_complexity Low_complexity 4 136 0 7 820 602 303 62 0 chr17 30896757 30896935 -64375716 + Lx8 LINE L1 7147 7335 -138 7 820 227 132 26 0 chr17 30896946 30896984 -64375667 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 7 820 514 311 59 21 chr17 30896992 30897179 -64375472 + MER58B DNA MER1_type 138 331 -10 7 820 743 229 104 0 chr17 30897330 30897522 -64375129 + B3 SINE B2 1 212 -4 7 820 477 296 149 50 chr17 30898387 30898629 -64374022 - B4A SINE B4 0 292 27 7 820 929 35 0 0 chr17 30898629 30898743 -64373908 - B1_Mus1 SINE Alu 0 148 35 7 820 311 238 45 90 chr17 30898664 30898775 -64373876 - MT2B LTR ERVL -337 264 159 7 820 333 0 0 0 chr17 30898841 30898878 -64373773 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 820 784 223 5 66 chr17 30899006 30899179 -64373472 + B3A SINE B2 1 166 -32 7 820 198 0 0 0 chr17 30899179 30899201 -64373450 + (TC)n Simple_repeat Simple_repeat 1 22 0 7 820 930 144 0 0 chr17 30899201 30899380 -64373271 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 820 784 223 5 66 chr17 30899380 30899416 -64373235 + B3A SINE B2 167 197 -1 7 820 243 0 0 0 chr17 30899812 30899839 -64372812 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 820 345 275 0 12 chr17 30899860 30899941 -64372710 - RSINE1 SINE B4 -59 106 27 8 820 325 298 104 22 chr17 30900270 30900452 -64372199 + Lx9 LINE L1 7241 7437 -207 8 820 414 0 0 0 chr17 30900468 30900514 -64372137 + (TG)n Simple_repeat Simple_repeat 1 46 0 8 820 229 275 92 81 chr17 30900680 30900702 -64371949 - YREP_Mm Unknown Unknown -1480 332 162 8 820 1130 75 7 0 chr17 30900702 30900849 -64371802 + B1_Mus1 SINE Alu 1 148 0 8 820 198 145 72 0 chr17 30900854 30900937 -64371714 + A-rich Low_complexity Low_complexity 1 89 0 8 820 1214 74 6 0 chr17 30901024 30901186 -64371465 + B2_Mm2 SINE B2 2 164 -31 8 820 207 0 0 0 chr17 30901192 30901215 -64371436 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 8 820 24 0 0 0 chr17 30901542 30901566 -64371085 + AT_rich Low_complexity Low_complexity 1 24 0 8 820 1071 29 14 41 chr17 30901567 30901712 -64370939 - B1_Mm SINE Alu 0 147 7 8 820 623 259 37 79 chr17 30902311 30902500 -64370151 - B3A SINE B2 -17 181 1 8 820 321 207 0 0 chr17 30902762 30902844 -64369807 + (TG)n Simple_repeat Simple_repeat 1 82 0 8 820 751 273 52 52 chr17 30902864 30903115 -64369536 - B4 SINE B4 0 292 42 8 820 359 267 85 101 chr17 30903103 30903232 -64369419 - B4 SINE B4 -165 127 1 8 820 333 0 0 0 chr17 30903386 30903423 -64369228 + (TA)n Simple_repeat Simple_repeat 2 38 0 8 820 387 0 0 0 chr17 30903423 30903465 -64369186 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 820 558 43 0 0 chr17 30903785 30903854 -64368797 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 8 820 447 295 167 71 chr17 30903868 30904222 -64368429 - MER68 LTR ERVL -165 398 11 8 820 383 188 9 0 chr17 30904545 30904657 -64367994 + GA-rich Low_complexity Low_complexity 1 113 0 8 820 1115 95 0 0 chr17 30905162 30905310 -64367341 + B1_Mus1 SINE Alu 1 148 0 8 820 460 332 5 59 chr17 30905418 30905639 -64367012 - MER3 DNA MER1_type 0 209 1 8 820 186 265 20 0 chr17 30906175 30906224 -64366427 - L3 LINE CR1 -457 4032 3983 8 820 483 323 0 0 chr17 30908985 30909309 -64363342 + (TG)n Simple_repeat Simple_repeat 1 324 0 8 820 493 294 38 25 chr17 30909309 30909466 -64363185 - B3A SINE B2 -16 182 24 8 820 345 306 90 0 chr17 30909756 30909867 -64362784 + RMER10B LTR ERVL 271 391 -7 8 820 333 230 0 13 chr17 30909930 30910005 -64362646 - ID_B1 SINE B4 -5 219 146 8 820 435 223 51 18 chr17 30910229 30910376 -64362275 + B4A SINE B4 10 168 -124 8 820 22 0 0 0 chr17 30910704 30910726 -64361925 + AT_rich Low_complexity Low_complexity 1 22 0 8 820 1019 82 7 0 chr17 30910951 30911098 -64361553 + (TCTA)n Simple_repeat Simple_repeat 2 149 0 8 820 638 138 54 101 chr17 30911099 30911228 -64361423 - B1_Mus2 SINE Alu -2 145 23 8 820 1167 75 0 7 chr17 30911386 30911534 -64361117 - B1_Mus1 SINE Alu 0 148 2 8 820 869 183 39 118 chr17 30911534 30911730 -64360921 - B3 SINE B2 -30 186 1 8 820 228 250 0 24 chr17 30912074 30912156 -64360495 + CT-rich Low_complexity Low_complexity 2 81 0 8 820 308 265 0 0 chr17 30912445 30912513 -64360138 - Charlie12 DNA MER1_type -2804 69 2 8 820 227 271 17 0 chr17 30912663 30912722 -64359929 + CT-rich Low_complexity Low_complexity 5 64 0 8 820 319 200 165 59 chr17 30912729 30912814 -64359837 - PB1 SINE Alu 0 127 34 8 820 360 43 0 0 chr17 30912820 30912866 -64359785 + (TG)n Simple_repeat Simple_repeat 1 46 0 8 820 233 209 29 15 chr17 30913070 30913138 -64359513 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 8 820 363 233 22 11 chr17 30913166 30913344 -64359307 + (TATG)n Simple_repeat Simple_repeat 1 180 0 8 820 615 27 0 0 chr17 30913366 30913439 -64359212 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 8 820 1657 165 88 9 chr17 30914023 30914366 -64358285 - ORR1D1 LTR MaLR -4 370 1 8 820 239 376 36 29 chr17 30914485 30914578 -64358073 + RMER12 LTR ERVK 713 804 -518 8 820 2586 43 172 3 chr17 30914578 30914926 -64357725 - MTB_Mm LTR MaLR 0 407 1 8 820 239 376 36 29 chr17 30914926 30914969 -64357682 + RMER12 LTR ERVK 805 849 -473 8 820 979 229 73 11 chr17 30914993 30915254 -64357397 - B4A SINE B4 -14 278 2 8 820 2703 46 3 9 chr17 30915442 30915771 -64356880 - ORR1A2 LTR MaLR 0 327 1 8 820 1251 202 77 7 chr17 30916298 30916587 -64356064 - ORR1D1 LTR MaLR -48 311 3 8 820 919 295 14 22 chr17 30916946 30917223 -64355428 + Lx5 LINE L1 6776 7050 0 8 820 1242 54 0 0 chr17 30917360 30917507 -64355144 - B1_Mus2 SINE Alu 0 147 1 8 820 461 196 0 93 chr17 30917564 30917682 -64354969 - B1_Mur3 SINE Alu -31 118 12 8 820 29 0 0 0 chr17 30917928 30917957 -64354694 + AT_rich Low_complexity Low_complexity 1 29 0 8 820 356 254 27 0 chr17 30918154 30918264 -64354387 + PB1D9 SINE Alu 2 114 -6 8 820 652 149 357 0 chr17 30918639 30918793 -64353858 + B3 SINE B2 1 209 -7 8 820 22 0 0 0 chr17 30918838 30918860 -64353791 + AT_rich Low_complexity Low_complexity 1 22 0 8 820 289 57 0 0 chr17 30918896 30918931 -64353720 + U2 snRNA snRNA 1 35 -153 8 820 593 183 29 0 chr17 30918970 30919074 -64353577 - U6 snRNA snRNA 0 107 1 8 820 455 0 18 0 chr17 30919762 30919817 -64352834 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 8 820 226 294 9 38 chr17 30919824 30919930 -64352721 + RMER12 LTR ERVK 746 848 -474 8 820 280 161 25 0 chr17 30919932 30920013 -64352638 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 8 820 446 145 46 0 chr17 30920085 30920216 -64352435 + (TCTA)n Simple_repeat Simple_repeat 2 138 0 8 820 947 229 28 19 chr17 30920545 30920759 -64351892 - ID_B1 SINE B4 -7 217 2 8 820 243 0 0 0 chr17 30920792 30920819 -64351832 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 8 820 688 250 83 24 chr17 30921459 30921627 -64351024 + B4 SINE B4 84 261 -31 8 820 239 167 43 17 chr17 30922382 30922498 -64350153 + (TA)n Simple_repeat Simple_repeat 2 120 0 8 820 22 0 0 0 chr17 30922501 30922523 -64350128 + AT_rich Low_complexity Low_complexity 1 22 0 8 820 1146 232 117 20 chr17 30922524 30922867 -64349784 - MTEa LTR MaLR 0 379 4 8 820 1041 140 0 0 chr17 30923484 30923662 -64348989 + (TA)n Simple_repeat Simple_repeat 1 178 0 8 820 400 273 38 120 chr17 30923713 30923871 -64348780 + B3A SINE B2 50 194 -4 8 820 303 28 0 0 chr17 30924323 30924359 -64348292 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 820 890 223 47 30 chr17 30924464 30924844 -64347807 - BGLII_B LTR ERVK -10 431 2 8 820 299 368 59 50 chr17 30924855 30925178 -64347473 - ORR1D2 LTR MaLR -43 327 2 8 820 375 233 0 11 chr17 30925278 30925365 -64347286 - ID_B1 SINE B4 -18 206 121 8 820 370 324 166 0 chr17 30925782 30925921 -64346730 - RSINE1 SINE B4 -2 163 2 8 820 590 39 13 0 chr17 30925922 30925999 -64346652 + (TC)n Simple_repeat Simple_repeat 1 78 0 8 820 2256 34 106 55 chr17 30926038 30926349 -64346302 - ORR1A2 LTR MaLR 0 327 1 8 820 364 335 15 65 chr17 30926744 30926945 -64345706 + L1M5 LINE L1 3882 4072 -2068 8 820 32 0 0 0 chr17 30926976 30927008 -64345643 + AT_rich Low_complexity Low_complexity 1 32 0 8 820 850 147 7 40 chr17 30927008 30927157 -64345494 - B1_Mur3 SINE Alu -5 144 1 8 820 682 241 27 70 chr17 30927192 30927379 -64345272 - B3A SINE B2 -1 197 19 8 820 894 168 22 22 chr17 30928169 30928352 -64344299 - B3A SINE B2 -15 183 1 8 820 227 235 0 0 chr17 30928375 30928426 -64344225 - L1MA7 LINE L1 -1 6290 6240 8 820 225 0 0 0 chr17 30928638 30928663 -64343988 + (TG)n Simple_repeat Simple_repeat 1 25 0 8 820 207 0 0 0 chr17 30928663 30928685 -64343966 + (GA)n Simple_repeat Simple_repeat 1 23 0 8 820 610 204 3 7 chr17 30929115 30929398 -64343253 + (TG)n Simple_repeat Simple_repeat 1 281 0 8 820 280 309 69 62 chr17 30929400 30929690 -64342961 - B4 SINE B4 0 292 1 8 820 892 192 117 20 chr17 30929952 30930149 -64342502 + B3 SINE B2 1 216 0 8 820 235 257 54 54 chr17 30930150 30930261 -64342390 - L1MA6 LINE L1 -8 6283 6173 8 820 340 300 21 86 chr17 30930308 30930494 -64342157 - L1MA6 LINE L1 -258 6042 5869 8 820 228 35 0 0 chr17 30931288 30931317 -64341334 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 820 276 233 100 33 chr17 30931320 30931412 -64341239 - Lx9 LINE L1 -201 7443 7344 8 820 219 36 0 0 chr17 30931412 30931440 -64341211 + (TC)n Simple_repeat Simple_repeat 1 28 0 8 820 276 233 100 33 chr17 30931440 30931467 -64341184 - Lx9 LINE L1 -301 7343 7317 8 820 494 256 32 16 chr17 30931809 30931932 -64340719 + RSINE1 SINE B4 3 127 -38 8 820 273 264 0 0 chr17 30932111 30932221 -64340430 + (CA)n Simple_repeat Simple_repeat 1 110 0 8 820 294 333 9 0 chr17 30932224 30932335 -64340316 + (CATA)n Simple_repeat Simple_repeat 3 114 0 8 821 1081 119 6 18 chr17 30933533 30933704 -64338947 - B2_Mm2 SINE B2 -4 191 23 8 821 710 299 30 5 chr17 30933689 30933891 -64338760 - B4A SINE B4 -85 207 1 8 821 1485 79 0 5 chr17 30934197 30934387 -64338264 + B2_Mm2 SINE B2 4 192 -3 8 821 737 176 0 0 chr17 30936037 30936162 -64336489 + ID_B1 SINE B4 98 222 -2 8 821 273 286 0 0 chr17 30936707 30936770 -64335881 - B4A SINE B4 -228 64 2 8 821 29 47 0 0 chr17 30936847 30936890 -64335761 + AT_rich Low_complexity Low_complexity 1 43 0 8 821 3054 64 26 3 chr17 30936997 30937388 -64335263 - MTB LTR MaLR 0 400 1 8 821 243 0 0 0 chr17 30937586 30937613 -64335038 + (T)n Simple_repeat Simple_repeat 1 27 0 9 821 538 213 74 0 chr17 30938139 30938247 -64334404 + B1F SINE Alu 22 137 -12 9 821 249 33 0 0 chr17 30938247 30938277 -64334374 + (CAGA)n Simple_repeat Simple_repeat 1 30 0 9 821 289 79 0 0 chr17 30938507 30938545 -64334106 - RLTR31A_Mm LTR ERVK -546 38 1 9 821 387 255 101 10 chr17 30938545 30938641 -64334010 + PB1 SINE Alu 22 126 -1 9 821 312 27 0 0 chr17 30938694 30938731 -64333920 + (CATA)n Simple_repeat Simple_repeat 3 39 0 9 821 180 219 0 0 chr17 30939397 30939429 -64333222 + L3 LINE CR1 4145 4176 -313 9 821 941 276 17 57 chr17 30939435 30939735 -64332916 + B4 SINE B4 2 289 -3 9 821 261 0 0 0 chr17 30939740 30939769 -64332882 + (CA)n Simple_repeat Simple_repeat 1 29 0 9 821 920 251 4 46 chr17 30940380 30940618 -64332033 + B4A SINE B4 13 240 -52 9 821 285 125 0 0 chr17 30940629 30940685 -64331966 + (CAAAAA)n Simple_repeat Simple_repeat 2 57 0 9 821 270 0 0 0 chr17 30940688 30940718 -64331933 + (CA)n Simple_repeat Simple_repeat 1 30 0 9 821 496 236 0 54 chr17 30940727 30940839 -64331812 + B3A SINE B2 50 155 -43 9 821 222 174 43 0 chr17 30941445 30941491 -64331160 + CT-rich Low_complexity Low_complexity 2 49 0 9 821 189 353 28 42 chr17 30942046 30942188 -64330463 - L2 LINE L2 -488 2931 2792 9 821 688 283 0 19 chr17 30943331 30943486 -64329165 + B3A SINE B2 9 160 -38 9 821 357 62 0 0 chr17 30943490 30943538 -64329113 + (CA)n Simple_repeat Simple_repeat 1 48 0 9 821 327 266 6 0 chr17 30944399 30944488 -64328163 + PB1D10 SINE Alu 5 95 -52 9 821 327 242 0 0 chr17 30944706 30944772 -64327879 - B4 SINE B4 -105 187 122 9 821 778 323 65 15 chr17 30945471 30945732 -64326919 + B4A SINE B4 1 274 -18 9 821 318 50 0 0 chr17 30945826 30945866 -64326785 + (GA)n Simple_repeat Simple_repeat 1 40 0 9 821 714 194 0 35 chr17 30946265 30946409 -64326242 + MER20 DNA MER1_type 3 141 -78 9 821 734 196 0 133 chr17 30947797 30947985 -64324666 + RSINE1 SINE B4 3 165 0 9 821 615 195 4 22 chr17 30947988 30948222 -64324429 + (CATA)n Simple_repeat Simple_repeat 1 229 0 9 821 619 290 6 64 chr17 30948638 30948811 -64323840 + RSINE1 SINE B4 2 164 -1 9 821 276 118 26 26 chr17 30948862 30948940 -64323711 + (TTATA)n Simple_repeat Simple_repeat 3 80 0 9 821 429 308 140 39 chr17 30948960 30949139 -64323512 + B4 SINE B4 80 276 -16 9 821 369 0 0 0 chr17 30949146 30949187 -64323464 + (CA)n Simple_repeat Simple_repeat 2 42 0 9 821 594 231 20 40 chr17 30950268 30950417 -64322234 + B1_Mur1 SINE Alu 2 147 -2 9 821 961 203 68 48 chr17 30950900 30951107 -64321544 - B3A SINE B2 -4 212 2 9 821 254 50 25 0 chr17 30951161 30951201 -64321450 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 9 821 673 279 7 0 chr17 30951279 30951426 -64321225 + RSINE1 SINE B4 2 149 -16 9 821 306 0 0 0 chr17 30951428 30951462 -64321189 + (CA)n Simple_repeat Simple_repeat 1 34 0 9 821 246 337 30 61 chr17 30951580 30951877 -64320774 + L1M5 LINE L1 4041 4328 -1818 9 821 282 314 83 36 chr17 30952037 30952315 -64320336 + L1M5 LINE L1 4536 4826 -1320 9 821 387 89 0 0 chr17 30952317 30952373 -64320278 + (CA)n Simple_repeat Simple_repeat 2 57 0 9 821 32 26 0 0 chr17 30953450 30953489 -64319162 + AT_rich Low_complexity Low_complexity 1 39 0 9 821 180 0 0 0 chr17 30953577 30953597 -64319054 + (T)n Simple_repeat Simple_repeat 1 20 0 9 821 259 96 0 76 chr17 30953738 30953817 -64318834 + A-rich Low_complexity Low_complexity 1 73 0 9 821 254 327 18 60 chr17 30954086 30954115 -64318536 - YREP_Mm Unknown Unknown -1472 340 182 9 821 529 316 0 7 chr17 30954115 30954252 -64318399 + ID_B1 SINE B4 83 218 -6 9 821 291 215 0 0 chr17 30954646 30954711 -64317940 + (CATA)n Simple_repeat Simple_repeat 4 68 0 9 821 26 0 0 0 chr17 30954841 30954867 -64317784 + AT_rich Low_complexity Low_complexity 1 26 0 9 821 614 288 14 0 chr17 30955226 30955365 -64317286 + RSINE1 SINE B4 8 148 -17 9 821 910 235 14 14 chr17 30955612 30955819 -64316832 - B3 SINE B2 -9 207 1 9 821 1202 68 0 0 chr17 30955861 30956009 -64316642 - B1_Mus1 SINE Alu 0 148 1 9 821 568 302 108 57 chr17 30956453 30956787 -64315864 - ORR1E LTR MaLR -8 351 1 9 821 907 239 105 23 chr17 30956957 30957223 -64315428 + B4 SINE B4 5 292 0 9 821 312 303 0 0 chr17 30957237 30957415 -64315236 + (CA)n Simple_repeat Simple_repeat 1 178 0 9 821 541 198 33 33 chr17 30958537 30958657 -64313994 + RSINE1 SINE B4 6 125 -40 9 821 369 0 0 0 chr17 30958684 30958725 -64313926 + (CA)n Simple_repeat Simple_repeat 2 42 0 9 821 285 51 0 0 chr17 30958732 30958771 -64313880 + (CAGAGA)n Simple_repeat Simple_repeat 2 40 0 9 821 405 129 0 0 chr17 30959210 30959280 -64313371 + (CA)n Simple_repeat Simple_repeat 2 71 0 9 821 180 182 0 0 chr17 30959765 30959809 -64312842 + C-rich Low_complexity Low_complexity 5 48 0 9 821 517 249 219 23 chr17 30960111 30960316 -64312335 + B4A SINE B4 22 266 -26 9 821 270 0 0 0 chr17 30960316 30960346 -64312305 + (CA)n Simple_repeat Simple_repeat 2 31 0 9 821 2732 156 50 42 chr17 30960488 30961011 -64311640 + RLTR11A2 LTR ERVK 1 527 0 9 821 3376 162 189 48 chr17 30961112 30961891 -64310760 - RMER19B LTR ERVK -12 890 2 9 821 222 37 0 0 chr17 30962061 30962088 -64310563 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 9 821 1182 91 31 41 chr17 30962347 30962541 -64310110 - B2_Mm2 SINE B2 -2 193 2 9 821 21 0 0 0 chr17 30962547 30962568 -64310083 + AT_rich Low_complexity Low_complexity 1 21 0 9 821 603 81 18 18 chr17 30963491 30963604 -64309047 + (TGGGGG)n Simple_repeat Simple_repeat 1 113 0 9 821 1645 218 93 18 chr17 30963764 30964152 -64308499 + MTD LTR MaLR 1 417 -2 9 821 2376 105 9 0 chr17 30964457 30964781 -64307870 + ORR1A2 LTR MaLR 1 327 0 9 821 1206 295 57 75 chr17 30964823 30965476 -64307175 - L1_Rod LINE L1 -116 5731 5091 9 821 268 275 168 87 chr17 30965748 30966082 -64306569 + RMER12 LTR ERVK 626 986 -336 9 821 403 278 62 16 chr17 30966373 30966501 -64306150 + B4 SINE B4 158 291 -1 9 821 504 200 11 0 chr17 30966902 30966992 -64305659 - ID_B1 SINE B4 -1 223 133 9 821 452 246 27 18 chr17 30967155 30967267 -64305384 - PB1D10 SINE Alu 0 117 5 9 821 22 0 0 0 chr17 30967286 30967308 -64305343 + AT_rich Low_complexity Low_complexity 1 22 0 9 821 242 246 15 44 chr17 30967388 30967456 -64305195 - RSINE1 SINE B4 -97 68 3 9 821 272 262 0 70 chr17 30967569 30967655 -64304996 + ID4 SINE ID 3 82 -1 9 821 602 175 118 53 chr17 30968283 30968452 -64304199 - B3A SINE B2 -17 181 2 9 821 333 0 0 0 chr17 30968465 30968502 -64304149 + (TC)n Simple_repeat Simple_repeat 2 38 0 9 821 315 306 14 0 chr17 30968512 30968584 -64304067 - ID SINE ID -150 74 2 9 821 213 65 0 0 chr17 30968633 30968664 -64303987 + (TG)n Simple_repeat Simple_repeat 1 31 0 9 821 471 318 0 29 chr17 30968675 30968811 -64303840 - RSINE1 SINE B4 0 165 34 9 821 401 222 0 14 chr17 30968861 30968934 -64303717 - ID4 SINE ID -1 82 11 9 821 722 256 119 46 chr17 30970107 30970442 -64302209 - MTD LTR MaLR -22 397 8 9 821 1217 41 0 13 chr17 30970707 30970856 -64301795 - B1_Mus1 SINE Alu 0 148 2 9 821 802 250 26 36 chr17 30970862 30971057 -64301594 - B3A SINE B2 0 198 6 9 821 257 324 0 0 chr17 30971681 30971752 -64300899 + CT-rich Low_complexity Low_complexity 2 72 0 9 821 834 158 37 19 chr17 30971780 30971941 -64300710 + Lx6 LINE L1 7297 7460 0 9 821 201 240 0 20 chr17 30972824 30972875 -64299776 + (GGGTG)n Simple_repeat Simple_repeat 2 51 0 9 821 201 39 0 0 chr17 30973128 30973154 -64299497 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 9 821 766 218 45 0 chr17 30973229 30973385 -64299266 + B3 SINE B2 1 163 -53 9 821 348 24 0 0 chr17 30973496 30973537 -64299114 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 821 260 272 29 0 chr17 30973537 30973622 -64299029 - B3 SINE B2 -20 178 89 9 821 715 197 0 0 chr17 30973647 30973769 -64298882 - B3A SINE B2 -76 122 1 9 821 717 172 0 32 chr17 30974735 30974921 -64297730 + C-rich Low_complexity Low_complexity 1 180 0 9 821 1328 211 33 126 chr17 30975138 30975534 -64297117 + ORR1E LTR MaLR 1 359 0 9 821 187 93 47 0 chr17 30976007 30976050 -64296601 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 9 821 752 267 28 0 chr17 30976955 30977131 -64295520 - ID_B1 SINE B4 -43 181 1 9 821 345 216 0 26 chr17 30977147 30977223 -64295428 - ID4_ SINE ID 0 83 10 9 821 1080 94 0 0 chr17 30977675 30977834 -64294817 + (TTTC)n Simple_repeat Simple_repeat 2 160 0 9 821 1026 173 10 42 chr17 30978176 30978369 -64294282 + B3A SINE B2 1 187 -11 9 821 267 318 159 47 chr17 30979211 30979696 -64292955 + L2a LINE L2 2802 3374 -52 9 821 278 276 66 0 chr17 30979866 30979942 -64292709 + ID4_ SINE ID 1 81 -2 9 821 453 242 108 15 chr17 30979945 30980075 -64292576 - B1F2 SINE Alu -6 143 2 9 821 408 208 116 54 chr17 30980075 30980170 -64292481 + MTE2b LTR MaLR 271 372 -7 9 821 207 0 0 0 chr17 30980286 30980309 -64292342 + (TG)n Simple_repeat Simple_repeat 2 24 0 9 821 306 0 0 0 chr17 30980311 30980345 -64292306 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 821 324 0 0 0 chr17 30982617 30982653 -64289998 + (T)n Simple_repeat Simple_repeat 1 36 0 1 821 314 346 81 21 chr17 30983897 30984083 -64288568 - L2c LINE L2 -5 3382 3186 1 821 883 194 11 43 chr17 30985125 30985313 -64287338 + B3A SINE B2 1 182 -16 1 821 319 167 24 12 chr17 30986150 30986235 -64286416 + (CATA)n Simple_repeat Simple_repeat 1 86 0 1 821 301 151 18 54 chr17 30986235 30986291 -64286360 + HAL1-3A_ME LINE L1 1975 2028 -830 1 821 415 246 103 0 chr17 30986326 30986460 -64286191 - B1F SINE Alu -1 148 1 1 821 256 148 16 16 chr17 30986727 30986789 -64285862 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 821 916 212 123 28 chr17 30986816 30987068 -64285583 - B4A SINE B4 -14 278 3 1 821 361 262 9 45 chr17 30987161 30987226 -64285425 + B3A SINE B2 89 153 -45 1 821 339 44 0 0 chr17 30987226 30987271 -64285380 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 821 361 262 9 45 chr17 30987271 30987317 -64285334 + B3A SINE B2 154 196 -2 1 821 231 218 14 7 chr17 30987367 30987451 -64285200 + T-rich Low_complexity Low_complexity 1 84 0 1 821 414 267 0 0 chr17 30987928 30988018 -64284633 - B4A SINE B4 -202 90 1 1 821 549 99 0 0 chr17 30988409 30988490 -64284161 + (TTC)n Simple_repeat Simple_repeat 3 83 0 1 821 563 304 0 0 chr17 30988801 30988939 -64283712 - RSINE1 SINE B4 -25 140 3 1 821 180 0 0 0 chr17 30989211 30989231 -64283420 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1 821 500 221 0 41 chr17 30989248 30989353 -64283298 - PB1 SINE Alu -18 109 8 1 821 788 176 139 22 chr17 30989386 30989566 -64283085 + B3 SINE B2 1 201 -15 1 821 366 85 0 0 chr17 30989601 30989660 -64282991 + (GA)n Simple_repeat Simple_repeat 2 60 0 1 821 833 269 5 0 chr17 30989914 30989988 -64282663 + ID SINE ID 7 81 -143 1 821 428 282 16 16 chr17 30989988 30990114 -64282537 + B1_Mus2 SINE Alu 1 126 -21 1 821 349 278 141 32 chr17 30990155 30990311 -64282340 + B2_Mm2 SINE B2 1 173 -22 1 821 726 166 5 0 chr17 30990312 30990538 -64282113 + (CA)n Simple_repeat Simple_repeat 1 227 0 1 821 198 0 0 0 chr17 30991004 30991026 -64281625 + (TTAA)n Simple_repeat Simple_repeat 4 25 0 1 821 405 0 0 0 chr17 30991658 30991703 -64280948 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 821 963 243 72 11 chr17 30991927 30992189 -64280462 - B4 SINE B4 -14 278 1 1 821 310 253 132 0 chr17 30992217 30992300 -64280351 + L1MC4a LINE L1 6586 6679 -1203 1 821 208 143 71 0 chr17 30992316 30992386 -64280265 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 821 918 225 75 0 chr17 30992388 30992575 -64280076 - B3 SINE B2 -14 202 2 1 821 752 237 26 27 chr17 30992600 30992813 -64279838 - B3A SINE B2 -1 215 4 1 821 545 241 109 51 chr17 30993364 30993527 -64279124 + B4A SINE B4 49 221 -71 1 821 766 291 28 28 chr17 30993527 30993678 -64278973 + B3 SINE B2 1 150 -66 1 821 315 0 0 0 chr17 30993678 30993713 -64278938 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 821 766 291 28 28 chr17 30993713 30993777 -64278874 + B3 SINE B2 151 216 0 1 821 266 330 16 25 chr17 30994270 30994391 -64278260 + L1ME3 LINE L1 5824 5943 -219 1 821 520 255 12 44 chr17 30994828 30994844 -64277807 - RSINE1 SINE B4 -10 155 139 1 821 198 0 0 0 chr17 30994844 30994866 -64277785 + (GA)n Simple_repeat Simple_repeat 2 23 0 1 821 520 255 12 44 chr17 30994866 30995009 -64277642 - RSINE1 SINE B4 -27 138 2 1 821 23 0 0 0 chr17 30995171 30995194 -64277457 + AT_rich Low_complexity Low_complexity 1 23 0 1 821 443 282 97 41 chr17 30995203 30995399 -64277252 - B3 SINE B2 -7 209 3 1 821 559 281 24 24 chr17 30996023 30996187 -64276464 + RSINE1 SINE B4 2 165 0 1 821 24 53 0 0 chr17 30996187 30996225 -64276426 + AT_rich Low_complexity Low_complexity 1 38 0 1 821 648 234 3 0 chr17 30996365 30996690 -64275961 + (CA)n Simple_repeat Simple_repeat 1 326 0 1 821 195 100 0 0 chr17 30997137 30997167 -64275484 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 821 303 49 0 0 chr17 30997626 30997667 -64274984 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 821 876 133 0 0 chr17 30998444 30998587 -64274064 + (TTCC)n Simple_repeat Simple_repeat 4 146 0 1 821 787 263 6 44 chr17 30998591 30998774 -64273877 - B3 SINE B2 -40 176 1 1 821 441 54 0 0 chr17 30999283 30999339 -64273312 + (GA)n Simple_repeat Simple_repeat 1 56 0 1 821 374 53 18 0 chr17 30999495 30999552 -64273099 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 821 519 98 33 0 chr17 30999552 30999644 -64273007 + (GA)n Simple_repeat Simple_repeat 1 95 0 1 821 1418 109 29 0 chr17 30999790 31000000 -64272651 + MTC LTR MaLR 1 216 -205 1 821 1184 108 27 11 chr17 31000000 31000188 -64272463 + MTC LTR MaLR 231 421 0 1 821 709 223 35 35 chr17 31000507 31000651 -64272000 + RSINE1 SINE B4 3 146 -19 2 821 990 278 46 25 chr17 31000741 31001025 -64271626 + B4A SINE B4 1 290 -2 3 821 253 254 0 27 chr17 31001649 31001722 -64270929 - MER5B DNA MER1_type -2 176 106 4 821 736 272 133 4 chr17 31001957 31002197 -64270454 + B4A SINE B4 2 272 -20 5 821 465 31 16 0 chr17 31002190 31002254 -64270397 + B1_Mus2 SINE Alu 83 147 0 6 821 191 174 43 0 chr17 31002288 31002334 -64270317 + (CATG)n Simple_repeat Simple_repeat 3 50 0 7 821 434 258 6 0 chr17 31002352 31002511 -64270140 + (CA)n Simple_repeat Simple_repeat 1 160 0 8 821 307 256 404 0 chr17 31002912 31003068 -64269583 + B4A SINE B4 1 219 -73 9 821 552 135 0 0 chr17 31003176 31003287 -64269364 + (TC)n Simple_repeat Simple_repeat 2 112 0 1 821 248 0 31 0 chr17 31003287 31003319 -64269332 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 821 411 304 148 26 chr17 31004133 31004322 -64268329 + ID_B1 SINE B4 3 214 -10 1 821 973 203 10 24 chr17 31004997 31005204 -64267447 + B3 SINE B2 7 210 -6 1 821 319 289 62 62 chr17 31005252 31005381 -64267270 + L1MCa LINE L1 1831 1959 -4549 1 821 387 169 0 0 chr17 31005381 31005452 -64267199 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 821 1157 206 24 0 chr17 31005516 31005725 -64266926 + B3 SINE B2 1 214 -2 1 821 773 265 12 0 chr17 31006007 31006169 -64266482 + RSINE1 SINE B4 2 165 0 1 821 603 302 31 31 chr17 31006414 31006609 -64266042 + B3A SINE B2 2 196 -2 1 821 1163 85 79 0 chr17 31006628 31006792 -64265859 + B2_Mm1a SINE B2 1 177 -16 1 821 270 0 0 0 chr17 31006793 31006823 -64265828 + (GA)n Simple_repeat Simple_repeat 2 31 0 2 821 1043 184 54 113 chr17 31006889 31007128 -64265523 + URR1B DNA MER1_type 1 225 0 2 821 195 42 0 0 chr17 31007203 31007227 -64265424 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 2 821 423 0 0 0 chr17 31008207 31008254 -64264397 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 821 275 256 24 60 chr17 31008421 31008504 -64264147 + ID4_ SINE ID 2 81 -2 2 821 399 41 0 0 chr17 31008709 31008758 -64263893 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 821 421 332 37 31 chr17 31009194 31009431 -64263220 - MLT1C-int LTR MaLR -1234 255 7 2 821 635 254 130 0 chr17 31009529 31009706 -64262945 + ID_B1 SINE B4 25 224 0 2 821 248 297 32 32 chr17 31009707 31009801 -64262850 - MLT1C LTR MaLR -99 368 275 2 821 243 0 0 0 chr17 31009892 31009919 -64262732 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 821 233 309 128 0 chr17 31009922 31010016 -64262635 - MLT1C LTR MaLR -309 158 53 2 821 2192 138 67 60 chr17 31010035 31010437 -64262214 - MTB_Mm LTR MaLR 0 407 3 2 821 697 225 51 32 chr17 31012451 31012607 -64260044 + RSINE1 SINE B4 3 161 -4 3 821 27 73 0 0 chr17 31012630 31012685 -64259966 + AT_rich Low_complexity Low_complexity 1 55 0 3 821 249 223 9 28 chr17 31012755 31012861 -64259790 + (TATG)n Simple_repeat Simple_repeat 1 104 0 3 821 21 71 0 0 chr17 31012922 31012964 -64259687 + AT_rich Low_complexity Low_complexity 1 42 0 3 821 674 267 167 72 chr17 31013536 31013883 -64258768 - MTD LTR MaLR -39 380 1 3 821 219 36 0 0 chr17 31014394 31014422 -64258229 + (TGGGGG)n Simple_repeat Simple_repeat 3 30 0 3 821 1074 74 0 14 chr17 31015264 31015402 -64257249 - B1_Mm SINE Alu -10 137 2 3 821 254 292 65 33 chr17 31015474 31015566 -64257085 - ORR1E LTR MaLR 0 379 285 3 821 458 244 24 24 chr17 31015564 31015690 -64256961 - ORR1E LTR MaLR -201 158 33 3 821 251 216 0 0 chr17 31016190 31016241 -64256410 + ID4_ SINE ID 2 52 -31 3 821 268 143 35 23 chr17 31016294 31016380 -64256271 + (CA)n Simple_repeat Simple_repeat 2 88 0 3 821 431 271 19 89 chr17 31016457 31016615 -64256036 + B4 SINE B4 3 149 -143 4 821 247 214 139 23 chr17 31016608 31016692 -64255959 + B4 SINE B4 203 270 -22 4 821 357 93 0 0 chr17 31016708 31016762 -64255889 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 821 272 48 24 0 chr17 31016782 31016824 -64255827 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 821 2031 190 73 19 chr17 31016859 31017326 -64255325 + RLTR20B3 LTR ERVK 73 564 -13 4 821 1024 180 39 29 chr17 31017445 31017651 -64255000 - B3 SINE B2 -6 210 3 4 821 227 31 31 0 chr17 31018260 31018292 -64254359 + (CCCCCA)n Simple_repeat Simple_repeat 3 35 0 4 821 501 17 0 0 chr17 31019440 31019498 -64253153 + (TC)n Simple_repeat Simple_repeat 1 58 0 4 821 195 97 0 0 chr17 31020575 31020606 -64252045 + L3b LINE CR1 436 466 -16 4 821 369 0 0 0 chr17 31021004 31021045 -64251606 + (TAA)n Simple_repeat Simple_repeat 2 42 0 4 821 867 297 8 42 chr17 31021281 31021378 -64251273 + B4 SINE B4 7 97 -195 5 821 1879 143 65 33 chr17 31021378 31021775 -64250876 - RMER17C LTR ERVK 0 410 1 5 821 867 297 8 42 chr17 31021775 31021937 -64250714 + B4 SINE B4 98 257 -35 5 821 532 278 104 0 chr17 31021937 31022110 -64250541 + B3A SINE B2 1 191 -7 5 821 271 296 88 112 chr17 31022278 31022537 -64250114 - Lx8 LINE L1 -5 7468 7222 5 821 5062 143 108 13 chr17 31022537 31023361 -64249290 - RMER19B LTR ERVK 0 902 1 5 821 271 296 88 112 chr17 31023361 31023432 -64249219 - Lx8 LINE L1 -252 7221 7146 5 821 483 226 19 0 chr17 31023768 31023874 -64248777 + RSINE1 SINE B4 8 115 -50 5 821 267 103 0 0 chr17 31024242 31024281 -64248370 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 821 279 133 0 0 chr17 31024966 31025011 -64247640 + (TGGGGG)n Simple_repeat Simple_repeat 3 47 0 5 821 2162 114 38 0 chr17 31025102 31025419 -64247232 - ORR1A4 LTR MaLR 0 329 1 5 821 389 333 71 14 chr17 31025881 31026091 -64246560 + B4 SINE B4 7 228 -64 5 821 849 149 0 0 chr17 31026092 31026226 -64246425 + B3A SINE B2 3 136 -62 6 821 243 0 0 0 chr17 31026255 31026282 -64246369 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 821 315 0 0 0 chr17 31026282 31026316 -64246335 + (GA)n Simple_repeat Simple_repeat 2 36 0 6 821 627 253 7 33 chr17 31026331 31026482 -64246169 + B1_Mur1 SINE Alu 1 147 -2 6 821 501 275 82 26 chr17 31027417 31027611 -64245040 - MLT1J2 LTR MaLR -120 328 124 6 821 503 298 14 0 chr17 31027659 31027800 -64244851 + MLT1B LTR MaLR 3 145 -245 6 821 650 256 5 33 chr17 31027810 31027973 -64244678 - ID_B1 SINE B4 -46 246 84 6 821 508 194 35 0 chr17 31027984 31028128 -64244523 + CT-rich Low_complexity Low_complexity 2 150 0 6 821 446 319 90 50 chr17 31028198 31028498 -64244153 + MLT1B LTR MaLR 156 467 0 6 821 772 63 9 9 chr17 31029476 31029588 -64243063 + (TTTC)n Simple_repeat Simple_repeat 1 112 0 6 821 342 0 0 0 chr17 31030145 31030183 -64242468 + (TC)n Simple_repeat Simple_repeat 2 39 0 6 821 414 57 0 0 chr17 31030183 31030235 -64242416 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 821 192 275 0 0 chr17 31030692 31030732 -64241919 + MIRc SINE MIR 117 156 -112 7 821 432 0 0 0 chr17 31030850 31030898 -64241753 + (TC)n Simple_repeat Simple_repeat 1 48 0 7 821 378 0 0 0 chr17 31030898 31030940 -64241711 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 821 660 240 84 22 chr17 31030982 31031161 -64241490 - B3A SINE B2 0 198 9 7 821 1101 184 34 5 chr17 31031181 31031388 -64241263 - B4 SINE B4 -79 213 1 7 821 213 339 34 51 chr17 31031626 31031744 -64240907 - L2c LINE L2 -11 3376 3261 7 821 1446 145 4 22 chr17 31031784 31032009 -64240642 + URR1B DNA MER1_type 5 225 0 7 821 315 261 0 92 chr17 31032300 31032958 -64239693 + G-rich Low_complexity Low_complexity 1 597 0 7 821 279 316 0 54 chr17 31032966 31033205 -64239446 + G-rich Low_complexity Low_complexity 1 226 0 7 821 307 295 0 60 chr17 31033268 31033452 -64239199 + G-rich Low_complexity Low_complexity 1 173 0 7 821 330 272 0 69 chr17 31033509 31034018 -64238633 + G-rich Low_complexity Low_complexity 1 473 0 7 821 359 285 22 71 chr17 31034404 31034567 -64238084 - MTEa LTR MaLR -9 370 202 7 821 390 328 15 8 chr17 31034602 31034734 -64237917 - MTEa LTR MaLR -163 216 84 7 821 535 238 8 8 chr17 31034734 31034857 -64237794 + B3A SINE B2 1 123 -75 8 821 324 200 106 0 chr17 31034908 31034993 -64237658 - MTEa LTR MaLR -285 94 1 7 821 1209 168 93 34 chr17 31035637 31035783 -64236868 - ORR1C1 LTR MaLR -11 373 162 8 821 690 13 0 0 chr17 31035783 31035862 -64236789 + (GA)n Simple_repeat Simple_repeat 1 79 0 8 821 1209 154 44 22 chr17 31035862 31036036 -64236615 - ORR1C1 LTR MaLR -206 172 3 8 821 464 270 39 99 chr17 31036041 31036222 -64236429 + MTEb LTR MaLR 203 372 -7 8 821 1491 231 156 48 chr17 31036332 31036813 -64235838 - MT2A LTR ERVL 0 533 1 8 821 1020 149 7 0 chr17 31036974 31037122 -64235529 + B1_Mur4 SINE Alu 2 150 0 8 821 452 290 45 8 chr17 31037188 31037320 -64235331 + MLT1J LTR MaLR 73 209 -303 8 821 184 268 18 0 chr17 31038358 31038414 -64234237 + MIR SINE MIR 74 130 -78 8 821 405 0 0 0 chr17 31040438 31040483 -64232168 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 821 226 348 59 22 chr17 31040927 31041062 -64231589 + MIRc SINE MIR 28 167 -101 8 821 572 0 15 0 chr17 31041371 31041439 -64231212 + (TG)n Simple_repeat Simple_repeat 2 70 0 9 821 432 0 0 0 chr17 31041785 31041833 -64230818 + (TG)n Simple_repeat Simple_repeat 1 48 0 9 821 324 0 0 0 chr17 31041833 31041868 -64230783 + (GA)n Simple_repeat Simple_repeat 1 36 0 9 821 226 269 36 60 chr17 31042544 31042627 -64230024 - 7SLRNA srpRNA srpRNA -233 81 1 9 821 571 245 19 26 chr17 31042555 31042710 -64229941 - B4 SINE B4 -136 156 3 9 821 201 129 0 0 chr17 31043698 31043729 -64228922 + (GGGTG)n Simple_repeat Simple_repeat 3 33 0 9 821 441 253 45 135 chr17 31043824 31044002 -64228649 + RSINE1 SINE B4 4 165 0 9 821 896 290 5 9 chr17 31045472 31045684 -64226967 - ID_B1 SINE B4 0 224 14 9 821 259 265 68 68 chr17 31045700 31045846 -64226805 + MIRb SINE MIR 5 150 -118 9 821 393 155 39 8 chr17 31046610 31046740 -64225911 + (TG)n Simple_repeat Simple_repeat 1 134 0 9 821 289 323 10 10 chr17 31047089 31047189 -64225462 + (TG)n Simple_repeat Simple_repeat 1 100 0 1 821 636 322 11 0 chr17 31047241 31047424 -64225227 - B4A SINE B4 -104 188 4 1 821 298 335 46 20 chr17 31047872 31048024 -64224627 - MIR SINE MIR -69 193 38 1 821 288 325 116 35 chr17 31049104 31049302 -64223349 - LTR33A_ LTR ERVL -275 256 43 1 821 338 356 39 8 chr17 31050137 31050285 -64222366 - MIRb SINE MIR -111 157 5 1 821 214 162 0 0 chr17 31050367 31050404 -64222247 + MIRc SINE MIR 112 148 -120 1 821 446 316 13 13 chr17 31051064 31051218 -64221433 + MIRb SINE MIR 38 191 -77 1 821 793 229 184 40 chr17 31051951 31052201 -64220450 + B4A SINE B4 3 288 -4 1 821 592 159 14 0 chr17 31052249 31052387 -64220264 + (CA)n Simple_repeat Simple_repeat 2 141 0 1 821 471 220 11 23 chr17 31052752 31052929 -64219722 + (TA)n Simple_repeat Simple_repeat 2 176 0 1 821 180 111 0 0 chr17 31052943 31052970 -64219681 + (TATATG)n Simple_repeat Simple_repeat 6 32 0 1 821 669 272 0 0 chr17 31053170 31053306 -64219345 - RSINE1 SINE B4 -22 143 8 1 821 888 49 10 4 chr17 31053332 31053459 -64219192 - B1_Mus1 SINE Alu -1 147 23 1 821 1813 233 37 59 chr17 31053707 31054246 -64218405 + RLTR11A LTR ERVK 2 528 0 1 821 1235 51 22 13 chr17 31055368 31055686 -64216965 + (TG)n Simple_repeat Simple_repeat 1 320 0 1 821 619 134 12 46 chr17 31056534 31056777 -64215874 + (CA)n Simple_repeat Simple_repeat 1 234 0 1 821 355 65 0 0 chr17 31056780 31056826 -64215825 + HAL1-3A_ME LINE L1 1973 2018 -840 1 821 344 347 48 89 chr17 31056980 31057249 -64215402 - ORR1E LTR MaLR -40 319 62 1 821 317 307 106 44 chr17 31057381 31057541 -64215110 + B4A SINE B4 2 171 -121 1 821 477 274 53 0 chr17 31057560 31057673 -64214978 + B1F1 SINE Alu 2 120 -29 1 821 1239 54 0 0 chr17 31058413 31058560 -64214091 + B1_Mus1 SINE Alu 2 148 0 1 821 512 277 33 60 chr17 31058966 31059116 -64213535 + RSINE1 SINE B4 4 149 -16 1 821 468 77 0 0 chr17 31059123 31059188 -64213463 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 821 513 308 77 70 chr17 31059252 31059538 -64213113 + B4 SINE B4 3 290 -2 1 821 712 234 7 21 chr17 31059630 31059770 -64212881 - ID_B1 SINE B4 -5 219 82 1 821 483 214 10 0 chr17 31059778 31059881 -64212770 - PB1D10 SINE Alu -2 115 12 1 821 227 227 14 96 chr17 31059975 31060048 -64212603 - MER106B DNA MER1_type -805 254 188 1 821 297 260 120 2 chr17 31060331 31060469 -64212182 - L1MC LINE L1 -2032 4114 3962 1 821 200 188 0 0 chr17 31060477 31060509 -64212142 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 821 734 220 72 141 chr17 31060536 31060670 -64211981 - B4A SINE B4 -20 272 146 1 821 867 156 75 43 chr17 31060670 31060857 -64211794 - B2_Mm2 SINE B2 0 195 3 1 821 734 220 72 141 chr17 31060857 31061013 -64211638 - B4A SINE B4 -147 145 2 1 821 318 350 73 34 chr17 31062146 31062350 -64210301 + MIR SINE MIR 31 242 -20 1 821 528 176 0 0 chr17 31062695 31062797 -64209854 + (TA)n Simple_repeat Simple_repeat 2 103 0 1 822 762 286 126 20 chr17 31064536 31064782 -64207869 + B4 SINE B4 7 278 -14 1 822 217 238 59 118 chr17 31064751 31064870 -64207781 + RSINE1 SINE B4 54 165 0 1 822 480 35 0 0 chr17 31065167 31065225 -64207426 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 822 472 285 145 56 chr17 31065487 31065721 -64206930 - MLT1F2 LTR MaLR -11 549 295 1 822 315 49 0 0 chr17 31065778 31065819 -64206832 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 1 822 566 255 0 9 chr17 31065839 31065950 -64206701 + ID_B1 SINE B4 104 213 -11 1 822 444 248 48 40 chr17 31065950 31065965 -64206686 + B1F2 SINE Alu 23 149 0 1 822 223 327 58 0 chr17 31068492 31068596 -64204055 - MIRb SINE MIR -48 220 111 1 822 855 252 142 19 chr17 31068612 31068879 -64203772 - RMER15 LTR ERVL 0 575 276 1 822 696 204 59 107 chr17 31069100 31069287 -64203364 + B3A SINE B2 5 182 -16 1 822 315 250 0 0 chr17 31069287 31069403 -64203248 + (CA)n Simple_repeat Simple_repeat 1 116 0 1 822 441 0 0 0 chr17 31069751 31069800 -64202851 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 822 249 220 0 0 chr17 31069864 31069914 -64202737 + RMER30 DNA MER1_type 2 51 -151 1 822 261 0 0 0 chr17 31070442 31070471 -64202180 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 1 822 315 49 0 0 chr17 31070511 31070552 -64202099 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 1 822 354 23 0 0 chr17 31070564 31070607 -64202044 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 822 593 279 29 0 chr17 31070607 31070743 -64201908 - RSINE1 SINE B4 -24 141 2 1 822 203 154 0 27 chr17 31070976 31071018 -64201633 + MIRb SINE MIR 30 73 -195 1 822 316 308 54 87 chr17 31071136 31071321 -64201330 - B4 SINE B4 -3 289 111 1 822 841 170 53 68 chr17 31071321 31071521 -64201130 - B3 SINE B2 -5 211 21 1 822 392 284 0 18 chr17 31072577 31072688 -64199963 + PB1D10 SINE Alu 3 111 -6 1 822 210 175 85 34 chr17 31072945 31073004 -64199647 - L3 LINE CR1 -4 4485 4424 1 822 437 34 17 0 chr17 31073465 31073524 -64199127 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 822 577 239 74 2 chr17 31076275 31076411 -64196240 + B3A SINE B2 2 145 -53 1 822 342 0 0 0 chr17 31076411 31076449 -64196202 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 822 548 259 43 128 chr17 31076449 31076547 -64196104 + B3 SINE B2 117 216 0 1 822 586 264 35 65 chr17 31077456 31077626 -64195025 + RSINE1 SINE B4 1 165 0 1 822 238 216 20 0 chr17 31077891 31077942 -64194709 - B1F SINE Alu 0 149 98 1 822 1328 98 16 0 chr17 31078004 31078188 -64194463 + B2_Mm2 SINE B2 5 191 -4 1 822 469 254 42 8 chr17 31078259 31078440 -64194211 + B3 SINE B2 2 195 0 1 822 286 276 134 62 chr17 31078458 31078547 -64194104 + PB1D7 SINE Alu 1 100 -20 1 822 2547 98 0 0 chr17 31078547 31078873 -64193778 + ORR1A2 LTR MaLR 1 326 -1 1 822 286 276 134 62 chr17 31078873 31078895 -64193756 + PB1D7 SINE Alu 101 120 0 1 822 2753 204 33 3 chr17 31078986 31079592 -64193059 + L1_Mur3 LINE L1 515 1138 -6590 1 822 8228 164 39 21 chr17 31079584 31081235 -64191416 + L1_Mur3 LINE L1 1307 2986 -2894 1 822 343 296 0 62 chr17 31081489 31081633 -64191018 + B1F1 SINE Alu 10 144 -5 1 822 1000 310 62 29 chr17 31081940 31082579 -64190072 - RMER1C Other Other -365 977 11 1 822 561 314 10 78 chr17 31083255 31083459 -64189192 - B3A SINE B2 0 198 9 1 822 230 275 181 0 chr17 31083635 31083773 -64188878 + L1MA10 LINE L1 6170 6332 -2 1 822 285 254 0 90 chr17 31084033 31084111 -64188540 + ID4_ SINE ID 2 72 -11 1 822 600 53 0 0 chr17 31084112 31084188 -64188463 + (GA)n Simple_repeat Simple_repeat 1 76 0 1 822 489 229 165 75 chr17 31084346 31084536 -64188115 + B3A SINE B2 1 191 -25 1 822 673 239 29 0 chr17 31084956 31085094 -64187557 + B1F1 SINE Alu 8 149 0 1 822 333 239 25 13 chr17 31085882 31086039 -64186612 + (TATATG)n Simple_repeat Simple_repeat 3 161 0 1 822 472 253 2 23 chr17 31086055 31086497 -64186154 + (TATATG)n Simple_repeat Simple_repeat 1 432 0 1 822 1505 172 64 115 chr17 31086498 31086873 -64185778 + RLTR18B LTR ERVK 1 356 -156 1 822 8122 213 78 63 chr17 31086876 31088293 -64184358 + RLTR18-int LTR ERVK 2744 4157 -1204 1 822 231 36 0 0 chr17 31088293 31088321 -64184330 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 822 8122 213 78 63 chr17 31088321 31089358 -64183293 + RLTR18-int LTR ERVK 4158 5240 -121 1 822 3283 55 5 0 chr17 31089358 31089756 -64182895 + MTB LTR MaLR 1 400 0 1 822 8122 213 78 63 chr17 31089756 31089882 -64182769 + RLTR18-int LTR ERVK 5241 5361 0 1 822 2435 206 27 43 chr17 31089882 31090399 -64182252 + RLTR18B LTR ERVK 1 509 -3 1 822 250 257 22 0 chr17 31090478 31090614 -64182037 + (TATATG)n Simple_repeat Simple_repeat 6 144 0 1 822 440 311 96 40 chr17 31090624 31090822 -64181829 - ID_B1 SINE B4 -14 210 2 1 822 230 0 33 0 chr17 31092572 31092602 -64180049 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 822 1388 132 13 43 chr17 31093094 31093324 -64179327 + URR1B DNA MER1_type 3 225 0 1 822 843 38 45 0 chr17 31093520 31093652 -64178999 + (TG)n Simple_repeat Simple_repeat 1 138 0 1 822 396 240 110 52 chr17 31094506 31094642 -64178009 - MLT1C LTR MaLR -120 347 204 1 822 441 145 0 0 chr17 31094642 31094718 -64177933 + (TC)n Simple_repeat Simple_repeat 2 77 0 1 822 735 71 0 0 chr17 31094751 31094849 -64177802 + (TG)n Simple_repeat Simple_repeat 1 98 0 1 822 488 214 11 33 chr17 31095234 31095418 -64177233 + (CATA)n Simple_repeat Simple_repeat 1 180 0 1 822 357 291 36 0 chr17 31095422 31095532 -64177119 + (CATG)n Simple_repeat Simple_repeat 2 115 0 1 822 180 277 64 0 chr17 31096509 31096556 -64176095 - MER5A DNA MER1_type -69 120 71 1 822 907 151 0 0 chr17 31096579 31096718 -64175933 - B1_Mur2 SINE Alu -1 148 10 1 822 590 183 0 0 chr17 31097841 31097934 -64174717 + BC1_Mm scRNA scRNA 1 93 -59 1 822 309 51 0 0 chr17 31097948 31097987 -64174664 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 822 459 0 0 0 chr17 31097987 31098037 -64174614 + (GA)n Simple_repeat Simple_repeat 1 51 0 1 822 638 165 37 0 chr17 31098037 31098146 -64174505 - RSINE1 SINE B4 -50 115 3 1 822 22 0 0 0 chr17 31098281 31098303 -64174348 + AT_rich Low_complexity Low_complexity 1 22 0 1 822 1073 71 35 6 chr17 31100316 31100487 -64172164 + (TTTTC)n Simple_repeat Simple_repeat 1 176 0 1 822 342 0 0 0 chr17 31100487 31100525 -64172126 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 822 715 268 100 26 chr17 31100525 31100755 -64171896 - B4 SINE B4 -26 266 20 1 822 450 0 0 0 chr17 31101078 31101128 -64171523 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 822 1716 198 40 35 chr17 31101537 31101678 -64170973 - ORR1D1 LTR MaLR 0 374 242 1 822 267 31 0 0 chr17 31101678 31101710 -64170941 + (CAGG)n Simple_repeat Simple_repeat 2 33 0 1 822 1716 198 40 35 chr17 31101710 31101940 -64170711 - ORR1D1 LTR MaLR -133 241 2 1 822 396 0 0 0 chr17 31102592 31102636 -64170015 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 822 1152 45 0 0 chr17 31102927 31103061 -64169590 + B1_Mus1 SINE Alu 2 135 -13 2 822 189 0 0 0 chr17 31103061 31103082 -64169569 + (CAAAA)n Simple_repeat Simple_repeat 1 21 0 2 822 842 223 37 32 chr17 31103090 31103280 -64169371 - B3A SINE B2 -6 192 2 2 822 640 223 116 40 chr17 31103291 31103410 -64169241 - ID_B1 SINE B4 -9 215 88 2 822 285 98 0 0 chr17 31103410 31103451 -64169200 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 822 640 223 116 40 chr17 31103451 31103504 -64169147 - ID SINE ID -137 87 30 2 822 474 225 0 0 chr17 31104127 31104238 -64168413 + (TA)n Simple_repeat Simple_repeat 1 111 0 2 822 237 304 53 182 chr17 31104495 31104648 -64168003 + MER2 DNA MER2_type 124 267 -78 2 822 979 179 131 5 chr17 31104648 31104839 -64167812 - B3 SINE B2 0 216 2 2 822 237 304 53 182 chr17 31104839 31104910 -64167741 + MER2 DNA MER2_type 268 319 -26 2 822 394 179 102 19 chr17 31105701 31105715 -64166936 + B1F SINE Alu 32 148 -1 2 822 513 154 21 32 chr17 31105715 31105809 -64166842 + ID_B1 SINE B4 130 222 -2 2 822 297 225 101 0 chr17 31105992 31106081 -64166570 - MER20 DNA MER1_type -117 102 5 2 822 183 255 108 81 chr17 31106399 31106510 -64166141 + L2 LINE L2 2963 3076 -343 2 822 335 294 82 7 chr17 31106568 31106719 -64165932 + MIR SINE MIR 19 188 -88 2 822 241 143 232 0 chr17 31106740 31106796 -64165855 - MTEa LTR MaLR -33 346 278 2 822 373 195 213 31 chr17 31106788 31106915 -64165736 - MTEa LTR MaLR -229 150 1 2 822 241 310 52 147 chr17 31107492 31107723 -64164928 - MLT1B LTR MaLR -12 378 170 2 822 454 287 17 17 chr17 31107734 31107851 -64164800 - PB1 SINE Alu -10 117 1 2 822 306 194 0 0 chr17 31108049 31108116 -64164535 + CT-rich Low_complexity Low_complexity 2 68 0 2 822 328 375 83 0 chr17 31108122 31108266 -64164385 - HAL1-3A_ME LINE L1 -419 2439 2284 2 822 315 191 0 0 chr17 31108268 31108336 -64164315 + CT-rich Low_complexity Low_complexity 3 70 0 2 822 942 237 17 0 chr17 31108373 31108550 -64164101 - ID_B1 SINE B4 -21 203 24 2 822 267 203 0 0 chr17 31108589 31108648 -64164003 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 822 640 181 4 17 chr17 31109151 31109384 -64163267 + (CA)n Simple_repeat Simple_repeat 1 229 0 2 822 676 179 0 16 chr17 31109441 31109623 -64163028 + (CA)n Simple_repeat Simple_repeat 1 179 0 2 822 268 333 86 51 chr17 31110030 31110264 -64162387 - MER90 LTR ERV1 -127 448 207 2 822 189 0 0 0 chr17 31111070 31111091 -64161560 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 822 1360 211 87 87 chr17 31111572 31111725 -64160926 - RMER6B LTR ERVK -10 451 311 2 822 800 48 9 0 chr17 31111725 31111830 -64160821 + (CCCCCT)n Simple_repeat Simple_repeat 6 111 0 2 822 1248 211 87 87 chr17 31111830 31112127 -64160524 - RMER6B LTR ERVK -151 310 1 2 822 2224 125 3 23 chr17 31113319 31113672 -64158979 + ORR1A1 LTR MaLR 1 346 0 2 822 471 35 0 0 chr17 31114136 31114193 -64158458 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 822 536 331 88 38 chr17 31115653 31115995 -64156656 - MLT1D LTR MaLR 0 505 147 2 822 559 308 21 87 chr17 31116855 31117143 -64155508 - B4A SINE B4 -21 271 3 2 822 249 309 11 69 chr17 31119066 31119153 -64153498 - ID4_ SINE ID -1 82 1 2 822 472 351 0 12 chr17 31119370 31119543 -64153108 + (CA)n Simple_repeat Simple_repeat 2 172 0 2 822 733 375 75 21 chr17 31119886 31120366 -64152285 - LTR40a LTR ERVL -7 512 7 2 822 435 250 52 0 chr17 31120400 31120496 -64152155 - B1F SINE Alu 0 149 49 2 822 263 281 16 0 chr17 31121797 31121861 -64150790 + (CATA)n Simple_repeat Simple_repeat 2 66 0 2 822 896 114 7 0 chr17 31122232 31122381 -64150270 + (TC)n Simple_repeat Simple_repeat 2 151 0 2 822 327 130 0 0 chr17 31122386 31122440 -64150211 + (TCC)n Simple_repeat Simple_repeat 1 54 0 2 822 490 274 21 122 chr17 31122447 31122696 -64149955 - B4A SINE B4 0 292 71 2 822 473 296 57 16 chr17 31122704 31122896 -64149755 - B3 SINE B2 -12 204 5 2 822 251 357 82 31 chr17 31126729 31126788 -64145863 + ID_B1 SINE B4 50 216 -8 2 822 276 330 40 0 chr17 31126788 31126888 -64145763 + B1F SINE Alu 38 141 -8 2 822 229 189 37 19 chr17 31126964 31127018 -64145633 + (CATG)n Simple_repeat Simple_repeat 1 55 0 2 822 369 267 66 7 chr17 31127061 31127197 -64145454 - L1MB7 LINE L1 -59 6125 5982 2 822 393 149 0 0 chr17 31127198 31127265 -64145386 + (CCCCAG)n Simple_repeat Simple_repeat 6 72 0 2 822 822 112 0 53 chr17 31128307 31128496 -64144155 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 822 879 153 0 0 chr17 31129619 31129750 -64142901 - B1_Mur1 SINE Alu -15 134 4 2 822 1244 89 0 6 chr17 31129772 31129953 -64142698 + (TTC)n Simple_repeat Simple_repeat 1 180 0 2 822 620 218 0 6 chr17 31129969 31130144 -64142507 + CT-rich Low_complexity Low_complexity 3 176 0 2 822 921 25 0 32 chr17 31130423 31130548 -64142103 + B1_Mm SINE Alu 27 147 0 2 822 202 341 0 12 chr17 31131041 31131127 -64141524 + (TATG)n Simple_repeat Simple_repeat 3 87 0 2 822 448 237 11 68 chr17 31131892 31132105 -64140546 + (TATG)n Simple_repeat Simple_repeat 1 200 0 2 822 572 145 8 22 chr17 31132146 31132280 -64140371 + (TG)n Simple_repeat Simple_repeat 1 132 0 2 822 334 181 28 45 chr17 31132717 31132896 -64139755 + (CATA)n Simple_repeat Simple_repeat 4 179 0 2 822 242 364 0 0 chr17 31133662 31133750 -64138901 + (TATG)n Simple_repeat Simple_repeat 1 88 0 2 822 391 262 35 24 chr17 31133757 31133939 -64138712 - MTE2b LTR MaLR -12 407 169 2 822 526 250 15 21 chr17 31133947 31134274 -64138377 + GA-rich Low_complexity Low_complexity 1 325 0 2 822 404 280 77 32 chr17 31135190 31135345 -64137306 + MER89 LTR ERV1 221 382 -177 2 822 418 200 17 40 chr17 31136515 31136692 -64135959 + (CATATA)n Simple_repeat Simple_repeat 6 178 0 2 822 540 181 27 7 chr17 31136746 31136896 -64135755 + (CATATA)n Simple_repeat Simple_repeat 6 158 0 2 822 610 183 11 33 chr17 31136939 31137120 -64135531 + (CATA)n Simple_repeat Simple_repeat 4 180 0 2 822 1010 235 249 3 chr17 31137202 31137535 -64135116 - MTD LTR MaLR 0 419 5 2 822 619 171 8 0 chr17 31138316 31138424 -64134227 + MTC LTR MaLR 5 112 -309 2 822 423 0 0 0 chr17 31138424 31138471 -64134180 + (TTCTC)n Simple_repeat Simple_repeat 5 51 0 2 822 619 204 13 732 chr17 31138471 31138493 -64134158 + MTC LTR MaLR 113 136 -283 2 822 224 158 0 0 chr17 31138513 31138551 -64134100 - B2_Mm2 SINE B2 -94 101 64 2 822 1176 96 22 6 chr17 31138591 31138770 -64133881 - B2_Mm2 SINE B2 -13 182 1 2 822 1591 208 10 7 chr17 31138771 31139081 -64133570 + MTC LTR MaLR 110 420 -1 2 822 800 176 322 18 chr17 31139335 31139618 -64133033 + MTD LTR MaLR 2 370 -49 2 822 336 64 0 0 chr17 31140199 31140246 -64132405 + B1_Mur4 SINE Alu 98 144 -6 2 822 315 0 0 0 chr17 31140676 31140711 -64131940 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 822 1080 90 0 0 chr17 31140898 31141042 -64131609 + B1_Mus1 SINE Alu 5 148 0 2 822 336 296 41 17 chr17 31141239 31141411 -64131240 + (TCCA)n Simple_repeat Simple_repeat 4 179 0 2 822 773 208 6 0 chr17 31142219 31142397 -64130254 + CT-rich Low_complexity Low_complexity 1 179 0 2 822 259 340 21 0 chr17 31142631 31142728 -64129923 - MLT1C LTR MaLR -295 172 74 2 822 554 264 149 12 chr17 31144196 31144445 -64128206 - B4A SINE B4 -8 284 2 2 822 312 306 169 16 chr17 31144471 31144660 -64127991 - L1MB5 LINE L1 -168 6006 5789 2 822 434 276 94 29 chr17 31144661 31144799 -64127852 + B1F SINE Alu 1 147 -2 2 822 519 67 0 62 chr17 31145291 31145387 -64127264 + (CCCCCA)n Simple_repeat Simple_repeat 6 95 0 2 822 226 354 10 0 chr17 31146122 31146218 -64126433 - MER2 DNA MER2_type -92 253 157 2 822 253 291 63 57 chr17 31146256 31146287 -64126364 - B2_Mm2 SINE B2 -15 180 5 2 822 671 238 35 7 chr17 31146287 31146431 -64126220 - RSINE1 SINE B4 -12 153 6 2 822 528 212 77 0 chr17 31146453 31146618 -64126033 - B3 SINE B2 -1 194 1 2 822 592 327 104 18 chr17 31149202 31149259 -64123392 + RMER19B LTR ERVK 1 57 -554 2 822 186 43 0 0 chr17 31149259 31149282 -64123369 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 822 4467 162 29 64 chr17 31149282 31150195 -64122456 + RMER19B LTR ERVK 49 902 0 2 822 866 92 149 0 chr17 31150732 31150873 -64121778 - B2_Mm2 SINE B2 -31 164 3 2 822 526 221 6 6 chr17 31151082 31151250 -64121401 + (CA)n Simple_repeat Simple_repeat 1 168 0 2 822 1384 53 26 11 chr17 31151270 31151429 -64121222 + B2_Mm1t SINE B2 2 160 -33 2 822 309 51 0 0 chr17 31151429 31151468 -64121183 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 2 822 1384 53 26 11 chr17 31151468 31151497 -64121154 + B2_Mm1t SINE B2 161 193 0 2 822 207 0 0 0 chr17 31151584 31151607 -64121044 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 2 822 499 148 23 0 chr17 31152593 31152681 -64119970 - B4A SINE B4 -201 91 2 2 822 372 323 57 62 chr17 31152901 31153112 -64119539 - MER77 LTR ERVL -264 343 134 2 822 2349 152 124 15 chr17 31153357 31153852 -64118799 - RMER4B LTR ERVK -56 529 17 2 822 393 22 0 0 chr17 31155110 31155156 -64117495 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 822 225 0 0 0 chr17 31155572 31155597 -64117054 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 822 488 30 15 0 chr17 31156349 31156415 -64116236 + (GGGA)n Simple_repeat Simple_repeat 3 69 0 2 822 256 257 132 9 chr17 31158790 31158896 -64113755 - MLT1D LTR MaLR -72 433 315 2 822 344 125 0 15 chr17 31159122 31159187 -64113464 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 822 672 254 42 5 chr17 31159219 31159409 -64113242 - B3A SINE B2 -1 197 1 2 822 351 0 0 0 chr17 31159519 31159558 -64113093 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 822 329 295 0 31 chr17 31160040 31160138 -64112513 + MTEb LTR MaLR 278 372 -7 2 822 482 243 32 19 chr17 31160277 31160432 -64112219 - MTE2b LTR MaLR -15 364 205 2 822 233 316 102 13 chr17 31161039 31161228 -64111423 + L2c LINE L2 3176 3359 -16 2 822 1251 77 0 0 chr17 31162435 31162603 -64110048 + B2_Mm2 SINE B2 2 169 -26 3 822 737 192 0 0 chr17 31162636 31162766 -64109885 + B2_Mm2 SINE B2 48 177 -18 3 822 305 231 101 13 chr17 31162766 31162845 -64109806 - L1MC4a LINE L1 -1203 6679 6594 3 822 317 125 0 18 chr17 31163584 31163641 -64109010 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 822 336 48 0 0 chr17 31164290 31164332 -64108319 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 822 1284 265 97 33 chr17 31164508 31164960 -64107691 + RCHARR1 DNA MER1_type 37 517 -457 3 822 1252 255 82 8 chr17 31164972 31165324 -64107327 + MTEb LTR MaLR 1 378 -1 3 822 275 247 67 0 chr17 31165380 31165469 -64107182 + MTE-int LTR MaLR 66 160 -1420 3 822 588 14 0 0 chr17 31166343 31166412 -64106239 + (TC)n Simple_repeat Simple_repeat 2 70 0 3 822 463 88 310 26 chr17 31166780 31166896 -64105755 - B2_Mm2 SINE B2 0 195 47 3 822 913 114 7 30 chr17 31166949 31167084 -64105567 - B2_Mm1t SINE B2 -60 133 2 3 822 2179 234 27 16 chr17 31167338 31167838 -64104813 - RLTR16 LTR ERVK -26 479 3 3 822 2117 139 27 67 chr17 31168034 31168436 -64104215 - ORR1B1 LTR MaLR -8 386 1 3 822 216 86 0 0 chr17 31168489 31168524 -64104127 + (T)n Simple_repeat Simple_repeat 1 35 0 3 822 226 380 29 6 chr17 31168606 31168778 -64103873 - L1M5 LINE L1 -761 5433 5258 3 822 296 102 25 0 chr17 31168954 31169003 -64103648 + ORR1A3 LTR MaLR 283 326 0 3 822 364 280 167 44 chr17 31169003 31169231 -64103420 - MLT1A0 LTR MaLR -94 271 16 3 822 1590 211 58 19 chr17 31169244 31169607 -64103044 - MTE2a LTR MaLR -2 377 1 3 822 1258 67 0 6 chr17 31169908 31170064 -64102587 + B2_Mm2 SINE B2 3 158 -37 3 822 252 0 0 0 chr17 31170064 31170092 -64102559 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 3 822 718 281 57 9 chr17 31171834 31172046 -64100605 + ID_B1 SINE B4 2 223 -1 3 822 204 40 0 0 chr17 31172047 31172072 -64100579 + (TAGA)n Simple_repeat Simple_repeat 1 25 0 3 822 402 147 0 0 chr17 31172342 31172410 -64100241 + (T)n Simple_repeat Simple_repeat 1 68 0 3 822 1229 68 0 0 chr17 31172410 31172557 -64100094 - B1_Mm SINE Alu 0 147 1 3 822 950 207 108 5 chr17 31172578 31172772 -64099879 - B3 SINE B2 0 216 3 3 822 242 347 162 0 chr17 31172938 31173105 -64099546 - MER117 DNA MER1_type -1 196 3 3 822 301 216 173 13 chr17 31173554 31173629 -64099022 + Tigger16b DNA Tigger 190 276 -61 3 822 421 336 92 26 chr17 31174042 31174271 -64098380 - MER2 DNA MER2_type -4 341 98 3 822 288 277 114 18 chr17 31174473 31174587 -64098064 - MLT1A0 LTR MaLR 0 365 241 3 822 443 130 25 38 chr17 31175210 31175290 -64097361 + B1_Mur1 SINE Alu 71 149 0 3 822 1153 176 40 19 chr17 31175671 31176031 -64096620 + RMER17C LTR ERVK 1 410 0 3 822 663 180 113 57 chr17 31176238 31176397 -64096254 - URR1A DNA MER1_type -56 170 3 3 822 1191 64 0 0 chr17 31176402 31176542 -64096109 + B1_Mus1 SINE Alu 2 141 -7 3 822 249 33 0 0 chr17 31176542 31176572 -64096079 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 3 822 457 333 42 19 chr17 31177711 31177971 -64094680 - L1MD1 LINE L1 -53 6189 5924 3 822 306 295 116 83 chr17 31178084 31178806 -64093845 - L1MD1 LINE L1 -597 5762 5018 3 822 316 359 0 0 chr17 31178856 31178959 -64093692 - L1MD1 LINE L1 -1720 4426 4324 3 822 225 275 0 0 chr17 31179193 31179262 -64093389 + Lx8 LINE L1 7403 7471 -2 3 822 252 0 0 0 chr17 31179929 31179957 -64092694 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 822 575 287 69 5 chr17 31179958 31180147 -64092504 + Tigger7 DNA MER2_type 2282 2482 -9 3 822 1902 152 50 11 chr17 31180436 31180866 -64091785 - RMER17C LTR ERVK -517 441 16 3 822 1498 69 0 5 chr17 31182157 31182346 -64090305 + B2_Mm2 SINE B2 2 189 -6 3 822 4431 24 0 0 chr17 31183450 31183943 -64088708 - MT2_Mm LTR ERVL 0 493 1 3 822 252 399 102 5 chr17 31183946 31184319 -64088332 + L3 LINE CR1 3726 4134 -355 3 822 237 260 0 0 chr17 31184453 31184503 -64088148 + MER2B DNA MER2_type 10 59 -277 3 822 1314 231 49 129 chr17 31184668 31185055 -64087596 - MTE2a LTR MaLR -23 356 1 3 822 371 194 0 14 chr17 31185055 31185127 -64087524 - RCHARR1 DNA MER1_type -547 427 357 3 822 2278 155 158 38 chr17 31185129 31185605 -64087046 + RMER16 LTR ERVK 1 533 0 3 822 8526 95 59 41 chr17 31185605 31187005 -64085646 + RMER16-int LTR ERVK 1 1425 -3981 3 822 1034 104 0 0 chr17 31187061 31187196 -64085455 + B1_Mus1 SINE Alu 1 135 -13 3 822 432 0 0 0 chr17 31187197 31187245 -64085406 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 3 822 263 173 0 0 chr17 31187261 31187313 -64085338 + RMER16-int LTR ERVK 2066 2117 -3691 3 822 246 267 17 0 chr17 31187313 31187373 -64085278 + MTC-int LTR MaLR 915 975 -283 3 822 795 98 3 8 chr17 31187373 31187501 -64085150 + RMER16-int LTR ERVK 1427 1537 -3869 3 822 20982 77 17 16 chr17 31187614 31190571 -64082080 + RMER16-int LTR ERVK 2358 5296 -110 3 822 483 91 0 49 chr17 31190660 31190741 -64081910 + RMER16-int LTR ERVK 5330 5406 0 3 822 2361 136 156 42 chr17 31190741 31191216 -64081435 + RMER16 LTR ERVK 1 529 -4 3 822 388 301 342 3 chr17 31191220 31191486 -64081165 - RCHARR1 DNA MER1_type -614 360 5 3 822 2470 136 68 10 chr17 31192032 31192426 -64080225 - MTC LTR MaLR -1 420 4 3 822 211 143 24 0 chr17 31193284 31193326 -64079325 + T-rich Low_complexity Low_complexity 6 48 0 3 822 3463 33 0 0 chr17 31193328 31193726 -64078925 - L1Md_T LINE L1 0 6582 6185 3 823 441 233 16 87 chr17 31196548 31196675 -64075976 + 5S rRNA rRNA 1 118 -3 3 823 559 287 8 8 chr17 31199667 31199790 -64072861 - ID_B1 SINE B4 -11 213 91 3 823 304 328 17 33 chr17 31199984 31200104 -64072547 - ID_B1 SINE B4 -105 119 2 3 823 21 57 0 0 chr17 31200150 31200185 -64072466 + AT_rich Low_complexity Low_complexity 1 35 0 3 823 205 344 30 33 chr17 31200650 31200812 -64071839 + MIR SINE MIR 46 194 -74 3 823 197 325 46 46 chr17 31201700 31201787 -64070864 + MIR3 SINE MIR 87 173 -35 3 823 429 70 0 0 chr17 31202085 31202142 -64070509 + (TTTTC)n Simple_repeat Simple_repeat 2 58 0 3 823 1192 74 0 0 chr17 31202144 31202292 -64070359 - B1_Mus1 SINE Alu 0 148 1 3 823 1567 234 43 16 chr17 31203550 31203919 -64068732 - MTE2b LTR MaLR 0 379 1 3 823 1186 63 0 0 chr17 31204747 31204889 -64067762 - B1_Mus1 SINE Alu -6 142 1 3 823 198 270 72 82 chr17 31205482 31205579 -64067072 - MIR3 SINE MIR -26 182 87 3 823 21 0 0 0 chr17 31205642 31205663 -64066988 + GC_rich Low_complexity Low_complexity 1 21 0 3 823 1083 89 0 0 chr17 31206573 31206719 -64065932 + B1_Mus2 SINE Alu 2 147 0 3 823 192 77 0 0 chr17 31206720 31206746 -64065905 + (A)n Simple_repeat Simple_repeat 1 26 0 3 823 333 0 0 0 chr17 31207273 31207310 -64065341 + (CAA)n Simple_repeat Simple_repeat 2 38 0 3 823 252 357 95 55 chr17 31209091 31209364 -64063287 - L3 LINE CR1 -2 4487 4204 3 823 261 0 0 0 chr17 31210033 31210062 -64062589 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 823 221 163 0 0 chr17 31211499 31211542 -64061109 + T-rich Low_complexity Low_complexity 1 43 0 3 823 417 95 0 0 chr17 31213741 31213804 -64058847 + (TTTC)n Simple_repeat Simple_repeat 3 65 0 3 823 1277 47 0 0 chr17 31213804 31213952 -64058699 - B1_Mus1 SINE Alu 0 148 1 3 823 2921 54 20 10 chr17 31213952 31214342 -64058309 - MTB LTR MaLR -6 394 1 3 823 491 294 51 14 chr17 31215467 31215605 -64057046 + RMER30 DNA MER1_type 52 194 -8 3 823 423 0 0 0 chr17 31217057 31217104 -64055547 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 823 515 202 31 25 chr17 31217865 31218027 -64054624 + G-rich Low_complexity Low_complexity 1 163 0 3 823 780 288 5 10 chr17 31218433 31218626 -64054025 - B3A SINE B2 -6 192 1 3 823 1337 221 149 17 chr17 31219381 31219744 -64052907 - MTD LTR MaLR -14 405 4 3 823 678 292 41 20 chr17 31219751 31219996 -64052655 - RMER15 LTR ERVL -51 524 275 3 823 3224 74 2 12 chr17 31220188 31220599 -64052052 + MTB_Mm LTR MaLR 1 407 0 3 823 633 304 70 56 chr17 31220885 31221171 -64051480 + B4 SINE B4 1 290 -2 3 823 2253 132 25 18 chr17 31221504 31221870 -64050781 - ORR1B2 LTR MaLR -2 377 1 3 823 463 56 14 14 chr17 31222954 31223026 -64049625 + (CA)n Simple_repeat Simple_repeat 1 72 0 3 823 340 272 8 81 chr17 31223062 31223186 -64049465 - PB1D10 SINE Alu 0 117 3 3 823 960 147 172 11 chr17 31224571 31224757 -64047894 + B3 SINE B2 1 216 0 3 823 228 111 0 0 chr17 31224760 31224796 -64047855 + (GGA)n Simple_repeat Simple_repeat 2 37 0 3 823 670 288 66 15 chr17 31227106 31227377 -64045274 + B4A SINE B4 2 286 -6 3 823 22 0 0 0 chr17 31228647 31228669 -64043982 + GC_rich Low_complexity Low_complexity 1 22 0 3 823 234 0 0 0 chr17 31229536 31229562 -64043089 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 823 916 271 38 78 chr17 31230014 31230386 -64042265 - ORR1E LTR MaLR 0 359 3 3 823 817 199 443 30 chr17 31231937 31232233 -64040418 - MTC LTR MaLR -3 418 1 3 823 1210 41 7 0 chr17 31232933 31233078 -64039573 + B1_Mus2 SINE Alu 2 147 0 3 823 236 53 26 0 chr17 31233085 31233123 -64039528 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 823 2215 120 3 66 chr17 31234820 31235167 -64037484 + ORR1A3 LTR MaLR 1 325 -1 3 823 303 49 0 0 chr17 31235391 31235432 -64037219 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 823 471 325 66 47 chr17 31236615 31236957 -64035694 + MLT1B LTR MaLR 117 461 -6 3 823 4235 118 32 12 chr17 31237943 31238666 -64033985 - RMER17A LTR ERVK -14 737 1 3 823 500 247 6 0 chr17 31242728 31242898 -64029753 + (ACTG)n Simple_repeat Simple_repeat 4 174 0 3 823 2176 205 86 22 chr17 31243638 31244187 -64028464 - RLTR31A_Mm LTR ERVK 0 584 1 3 823 292 266 142 38 chr17 31245724 31245935 -64026716 - MLT1I LTR MaLR 0 411 179 3 823 202 289 0 0 chr17 31246223 31246275 -64026376 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 823 527 286 63 0 chr17 31246778 31246904 -64025747 + B3A SINE B2 27 160 -38 4 823 225 0 0 0 chr17 31246907 31246932 -64025719 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 823 816 242 209 38 chr17 31247223 31247539 -64025112 - ORR1E LTR MaLR -4 375 6 4 823 822 154 0 0 chr17 31247554 31247684 -64024967 - B1_Mur3 SINE Alu 0 149 20 4 823 267 31 0 0 chr17 31251443 31251475 -64021176 + (T)n Simple_repeat Simple_repeat 1 32 0 4 823 192 77 0 0 chr17 31251937 31251963 -64020688 + (CAACG)n Simple_repeat Simple_repeat 2 27 0 4 823 265 221 87 14 chr17 31252341 31252410 -64020241 + MIR3 SINE MIR 94 167 -41 4 823 198 0 0 0 chr17 31253718 31253740 -64018911 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 4 823 29 0 0 0 chr17 31254906 31254935 -64017716 + AT_rich Low_complexity Low_complexity 1 29 0 4 823 1995 160 109 0 chr17 31255524 31255892 -64016759 - MTC LTR MaLR -8 413 6 4 823 189 0 0 0 chr17 31256443 31256464 -64016187 + (CGGGGG)n Simple_repeat Simple_repeat 3 23 0 4 823 297 0 0 0 chr17 31256939 31256972 -64015679 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 823 252 0 0 0 chr17 31256972 31256999 -64015652 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 823 538 263 0 0 chr17 31257017 31257131 -64015520 - B1F2 SINE Alu -2 147 34 4 823 222 37 0 0 chr17 31257264 31257291 -64015360 + (GA)n Simple_repeat Simple_repeat 2 28 0 4 823 185 0 0 39 chr17 31257635 31257661 -64014990 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 4 823 1296 228 96 6 chr17 31257671 31257737 -64014914 + MTD LTR MaLR 19 84 -335 4 823 1414 51 45 0 chr17 31257737 31257913 -64014738 + B2_Mm2 SINE B2 2 185 -10 4 823 1296 228 96 6 chr17 31257913 31258168 -64014483 + MTD LTR MaLR 85 368 -51 4 823 2642 71 3 3 chr17 31258462 31258788 -64013863 + ORR1A2 LTR MaLR 1 326 -1 4 823 2498 139 2 82 chr17 31260330 31260831 -64011820 - RMER4A LTR ERVK 0 466 6 4 823 1240 256 63 51 chr17 31261710 31262105 -64010546 + MTD LTR MaLR 20 419 0 4 823 248 85 0 41 chr17 31263375 31263424 -64009227 + (TCTCTG)n Simple_repeat Simple_repeat 6 52 0 4 823 205 160 26 26 chr17 31263475 31263552 -64009099 + (TCTCTG)n Simple_repeat Simple_repeat 6 82 0 4 823 417 90 0 0 chr17 31263610 31263677 -64008974 + (TC)n Simple_repeat Simple_repeat 2 68 0 4 823 234 361 76 71 chr17 31263720 31263759 -64008892 - B3 SINE B2 -15 201 4 4 823 563 323 19 0 chr17 31263759 31263917 -64008734 - RSINE1 SINE B4 0 165 5 4 823 1047 235 9 13 chr17 31263903 31264136 -64008515 - B4 SINE B4 -59 233 2 4 823 434 320 109 12 chr17 31264652 31264899 -64007752 + RMER5 LTR ERV1 112 382 -152 4 823 246 189 19 0 chr17 31264972 31264986 -64007665 - PB1D10 SINE Alu 0 117 64 4 823 265 103 0 0 chr17 31264986 31265025 -64007626 - ID_B1 SINE B4 -12 212 174 4 823 2480 167 105 27 chr17 31265072 31265558 -64007093 + RLTR11A LTR ERVK 5 528 0 4 823 228 202 43 37 chr17 31267028 31267192 -64005459 + (TATAA)n Simple_repeat Simple_repeat 5 169 0 4 823 228 247 21 0 chr17 31267125 31267218 -64005433 + (TA)n Simple_repeat Simple_repeat 1 95 0 4 823 536 233 16 104 chr17 31267281 31267305 -64005346 - B2_Mm2 SINE B2 -9 186 163 4 823 315 0 0 0 chr17 31267305 31267340 -64005311 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 823 688 233 16 104 chr17 31267340 31267497 -64005154 - B3 SINE B2 -36 180 21 4 823 770 291 93 25 chr17 31268769 31269048 -64003603 + RLTR18B LTR ERVK 192 489 -23 4 823 595 278 253 17 chr17 31269068 31269369 -64003282 + RLTR18-int LTR ERVK 21 392 -4969 4 823 1075 109 6 6 chr17 31269374 31269549 -64003102 + (TAGA)n Simple_repeat Simple_repeat 2 176 0 4 823 210 37 0 0 chr17 31270121 31270148 -64002503 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 4 823 442 309 36 7 chr17 31270441 31270581 -64002070 - RSINE1 SINE B4 0 165 22 4 823 1054 69 14 20 chr17 31272357 31272504 -64000147 + B1_Mus1 SINE Alu 1 146 -2 4 823 426 216 16 8 chr17 31272504 31272630 -64000021 + (TA)n Simple_repeat Simple_repeat 2 128 0 4 823 396 0 0 0 chr17 31272868 31272912 -63999739 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 823 366 23 0 0 chr17 31272912 31272954 -63999697 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 823 722 241 6 30 chr17 31272984 31273151 -63999500 + RSINE1 SINE B4 3 165 0 4 823 423 0 0 0 chr17 31273510 31273557 -63999094 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 823 394 292 0 44 chr17 31273675 31273793 -63998858 - B1_Mur3 SINE Alu -19 130 17 4 823 2085 141 47 102 chr17 31273793 31274045 -63998606 + RLTR14 LTR ERV1 1 239 -143 4 823 351 46 30 30 chr17 31274045 31274112 -63998539 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 4 823 2085 141 47 102 chr17 31274112 31274263 -63998388 + RLTR14 LTR ERV1 240 382 0 4 823 394 292 0 44 chr17 31274263 31274280 -63998371 - B1_Mur3 SINE Alu -133 16 1 4 823 801 214 7 0 chr17 31274375 31274520 -63998131 + RSINE1 SINE B4 2 147 -18 4 823 25 0 0 0 chr17 31274532 31274557 -63998094 + AT_rich Low_complexity Low_complexity 1 25 0 4 823 334 374 30 78 chr17 31274990 31275202 -63997449 + L1ME1 LINE L1 5923 6123 -56 4 823 821 189 0 7 chr17 31275202 31275351 -63997300 - B1_Mus1 SINE Alu 0 148 1 4 823 334 374 30 78 chr17 31275351 31275408 -63997243 + L1ME1 LINE L1 6124 6179 0 4 823 1132 272 102 5 chr17 31276378 31276751 -63995900 + MTD LTR MaLR 4 412 -7 4 823 208 111 22 22 chr17 31276914 31276960 -63995691 + C-rich Low_complexity Low_complexity 3 48 0 4 823 678 156 335 0 chr17 31277108 31277275 -63995376 - URR1B DNA MER1_type -2 223 1 4 823 240 296 20 30 chr17 31277749 31277880 -63994771 + (CATA)n Simple_repeat Simple_repeat 1 129 0 4 823 192 40 0 0 chr17 31277884 31277909 -63994742 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 823 458 292 8 24 chr17 31278383 31278506 -63994145 + B4A SINE B4 3 123 -169 4 823 659 208 159 53 chr17 31278506 31278591 -63994060 + B4A SINE B4 1 103 -189 4 823 208 0 30 30 chr17 31278591 31278624 -63994027 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 4 823 659 208 159 53 chr17 31278624 31278802 -63993849 + B4A SINE B4 104 292 0 4 823 183 284 0 19 chr17 31278817 31278975 -63993676 + (CA)n Simple_repeat Simple_repeat 2 156 0 4 823 201 232 0 0 chr17 31278999 31279068 -63993583 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 823 865 146 6 6 chr17 31280407 31280502 -63992149 + polypurine Low_complexity Low_complexity 1 96 0 4 823 1342 50 6 6 chr17 31280502 31280682 -63991969 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 823 865 146 6 6 chr17 31280682 31280752 -63991899 + polypurine Low_complexity Low_complexity 97 166 0 4 823 218 70 51 34 chr17 31281548 31281607 -63991044 + T-rich Low_complexity Low_complexity 2 61 0 4 823 225 0 0 0 chr17 31282025 31282050 -63990601 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 823 269 161 0 51 chr17 31282276 31282335 -63990316 + MTD LTR MaLR 3 58 -361 4 823 846 178 61 100 chr17 31282332 31282563 -63990088 + MTD LTR MaLR 198 419 0 4 823 450 0 0 0 chr17 31283148 31283198 -63989453 + (TC)n Simple_repeat Simple_repeat 1 50 0 4 823 246 309 10 21 chr17 31284101 31284197 -63988454 + L1MEf LINE L1 637 731 -5669 4 823 610 306 124 10 chr17 31284203 31284510 -63988141 - MLT1B LTR MaLR -3 387 46 4 823 329 194 16 0 chr17 31284614 31284676 -63987975 - MTEb LTR MaLR 0 379 317 4 823 1089 72 67 62 chr17 31284685 31284878 -63987773 + B2_Mm2 SINE B2 2 195 0 4 823 304 355 66 66 chr17 31284946 31285172 -63987479 - MTEb LTR MaLR -64 295 70 4 823 3459 295 87 50 chr17 31285201 31286684 -63985967 - ORR1E-int LTR MaLR -41 1539 2 4 823 587 302 118 84 chr17 31286688 31287035 -63985616 - ORR1E LTR MaLR 0 359 1 4 823 525 385 92 17 chr17 31287132 31287547 -63985104 + L1MEf LINE L1 1016 1461 -4954 4 823 697 181 13 13 chr17 31287547 31287704 -63984947 + GA-rich Low_complexity Low_complexity 3 159 0 4 823 6762 57 3 2 chr17 31287740 31288617 -63984034 + L1Md_F2 LINE L1 5703 6580 -2 4 823 1332 73 17 0 chr17 31288666 31288843 -63983808 + B2_Mm2 SINE B2 2 181 -14 4 823 266 329 12 0 chr17 31289687 31289769 -63982882 - MTEb LTR MaLR 0 379 297 4 823 296 24 24 0 chr17 31290109 31290150 -63982501 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 823 420 310 89 94 chr17 31290275 31290678 -63981973 + LTR40b LTR ERVL 53 453 -9 4 823 252 226 0 0 chr17 31291615 31291677 -63980974 + CT-rich Low_complexity Low_complexity 4 65 0 4 823 288 286 0 38 chr17 31291677 31291773 -63980878 - ID4_ SINE ID -48 104 18 4 823 311 264 14 129 chr17 31291796 31291935 -63980716 - PB1 SINE Alu 0 127 5 4 823 368 257 29 10 chr17 31292166 31292268 -63980383 - B1F SINE Alu -45 104 1 4 823 466 312 0 0 chr17 31293277 31293389 -63979262 + B3A SINE B2 1 112 -86 4 823 450 94 0 0 chr17 31293415 31293479 -63979172 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 823 240 35 0 0 chr17 31293545 31293574 -63979077 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 823 631 137 93 58 chr17 31294308 31294447 -63978204 + B1_Mur4 SINE Alu 7 150 0 4 823 1972 189 117 21 chr17 31294994 31295525 -63977126 + RLTR31A_Mm LTR ERVK 1 582 -2 4 823 577 219 225 24 chr17 31295806 31296091 -63976560 + ORR1D2 LTR MaLR 1 364 -6 4 823 362 264 0 15 chr17 31296087 31296176 -63976475 + MTE2b LTR MaLR 18 100 -279 4 823 1759 181 45 24 chr17 31296176 31296556 -63976095 + ORR1B1 LTR MaLR 1 388 -6 4 823 890 253 38 29 chr17 31296553 31296793 -63975858 + MTE2b LTR MaLR 138 379 0 4 823 422 167 12 0 chr17 31298207 31298291 -63974360 + (TG)n Simple_repeat Simple_repeat 2 86 0 4 823 31 0 0 0 chr17 31298291 31298322 -63974329 + AT_rich Low_complexity Low_complexity 1 31 0 4 823 736 245 95 78 chr17 31298560 31298957 -63973694 + RMER2 LTR ERV1 1 538 -29 4 823 523 254 222 13 chr17 31299075 31299314 -63973337 + B4 SINE B4 2 290 -2 4 823 265 276 97 28 chr17 31302991 31303141 -63969510 + L2a LINE L2 3208 3353 -22 4 823 305 47 0 23 chr17 31303156 31303200 -63969451 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 4 823 359 286 79 0 chr17 31304462 31304602 -63968049 + L1M2 LINE L1 5540 5690 -610 4 823 738 227 13 7 chr17 31304989 31305140 -63967511 + RSINE1 SINE B4 3 154 -11 4 823 1538 244 42 150 chr17 31305239 31305807 -63966844 + RLTR18B LTR ERVK 1 507 -5 4 823 333 210 37 74 chr17 31305814 31305922 -63966729 - PB1D7 SINE Alu -16 104 1 5 823 288 235 61 12 chr17 31306155 31306237 -63966414 + MLT1C LTR MaLR 17 102 -365 5 823 463 310 116 50 chr17 31307610 31308075 -63964576 + L1MD LINE L1 2561 3056 -3090 5 823 758 298 194 52 chr17 31308066 31308106 -63964545 + L1MD LINE L1 3183 3223 -2923 5 823 698 161 57 0 chr17 31308106 31308230 -63964421 + B1_Mur2 SINE Alu 2 132 -17 5 823 429 20 0 0 chr17 31308231 31308281 -63964370 + (TAA)n Simple_repeat Simple_repeat 2 51 0 5 823 758 298 194 52 chr17 31308281 31309091 -63963560 + L1MD LINE L1 3224 4168 -1978 5 823 398 101 14 0 chr17 31309091 31309160 -63963491 + (TA)n Simple_repeat Simple_repeat 1 70 0 5 823 758 298 194 52 chr17 31309160 31309224 -63963427 + L1MD LINE L1 4169 4232 -1914 5 823 239 241 24 60 chr17 31309224 31309308 -63963343 + ID4 SINE ID 1 81 -2 5 823 758 298 194 52 chr17 31309308 31309467 -63963184 + L1MD LINE L1 4233 4412 -1734 5 823 201 108 0 0 chr17 31309496 31309533 -63963118 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 5 823 259 302 119 52 chr17 31309590 31309859 -63962792 + L1MD LINE L1 4613 4899 -1247 5 823 1085 85 0 0 chr17 31309993 31310134 -63962517 + B1_Mm SINE Alu 1 141 -6 5 823 198 0 0 0 chr17 31310144 31310166 -63962485 + (A)n Simple_repeat Simple_repeat 1 22 0 5 823 959 255 86 74 chr17 31310310 31310485 -63962166 + MTE2a LTR MaLR 18 183 -196 5 823 4557 126 53 86 chr17 31310485 31311421 -63961230 - RMER17A2 LTR ERVK 0 906 1 5 823 959 255 86 74 chr17 31311421 31311596 -63961055 + MTE2a LTR MaLR 184 372 -7 5 823 438 264 77 11 chr17 31311614 31311799 -63960852 - B3A SINE B2 -9 207 5 5 823 1078 74 0 39 chr17 31312359 31312375 -63960276 - B1_Mus1 SINE Alu 0 148 138 5 823 306 0 0 0 chr17 31312375 31312409 -63960242 + (TTG)n Simple_repeat Simple_repeat 2 35 0 5 823 1078 74 0 39 chr17 31312409 31312546 -63960105 - B1_Mus1 SINE Alu -11 137 1 5 823 1427 219 94 12 chr17 31312948 31313290 -63959361 + ORR1D2 LTR MaLR 1 370 0 5 823 695 282 50 93 chr17 31313561 31313839 -63958812 + B4A SINE B4 1 266 -26 5 823 813 324 19 56 chr17 31315124 31315444 -63957207 + Tigger7 DNA MER2_type 23 330 -2161 5 823 1793 150 38 32 chr17 31315856 31316200 -63956451 + MTC LTR MaLR 1 346 -75 5 823 513 310 29 12 chr17 31316205 31316378 -63956273 + Tigger7 DNA MER2_type 2292 2467 -24 5 823 201 74 0 0 chr17 31316483 31316510 -63956141 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 823 347 284 9 38 chr17 31319073 31319179 -63953472 + BC1_Mm scRNA scRNA 2 104 -48 5 823 840 219 87 0 chr17 31319319 31319515 -63953136 + B3 SINE B2 3 215 -1 5 823 241 270 25 63 chr17 31319636 31319715 -63952936 + B3A SINE B2 10 85 -113 5 823 692 174 17 7 chr17 31319715 31320018 -63952633 + (CA)n Simple_repeat Simple_repeat 1 306 0 5 823 295 311 65 16 chr17 31320084 31320208 -63952443 + L1MB5 LINE L1 6031 6160 -14 5 823 270 236 23 40 chr17 31322300 31322414 -63950237 + PB1D7 SINE Alu 22 132 -16 5 823 309 274 39 10 chr17 31322723 31322826 -63949825 + MLT1C LTR MaLR 238 343 -124 5 823 613 287 45 56 chr17 31324746 31325034 -63947617 + B4 SINE B4 2 286 -6 5 823 411 267 59 0 chr17 31325076 31325211 -63947440 + L1MDb LINE L1 988 1130 -5279 5 824 762 189 18 14 chr17 31326987 31327565 -63945086 + (CATA)n Simple_repeat Simple_repeat 1 580 0 5 824 239 220 36 18 chr17 31327546 31327657 -63944994 + (CATATA)n Simple_repeat Simple_repeat 4 116 0 5 824 257 260 0 0 chr17 31329137 31329187 -63943464 + (CGTG)n Simple_repeat Simple_repeat 2 51 0 5 824 279 0 0 0 chr17 31329913 31329944 -63942707 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 5 824 227 239 169 11 chr17 31329944 31330022 -63942629 - PB1D7 SINE Alu -10 110 18 5 824 383 299 92 0 chr17 31329952 31330116 -63942535 - ID_B1 SINE B4 -45 179 1 5 824 581 301 120 79 chr17 31332204 31332597 -63940054 + MLT1C LTR MaLR 49 457 -10 5 824 1259 206 92 15 chr17 31333003 31333264 -63939387 + MTD LTR MaLR 127 407 -12 5 824 270 253 0 25 chr17 31334373 31334454 -63938197 + GA-rich Low_complexity Low_complexity 2 80 0 5 824 376 176 105 12 chr17 31336733 31336819 -63935832 + B1F1 SINE Alu 37 130 -19 5 824 630 60 0 0 chr17 31337413 31337496 -63935155 + (TTCC)n Simple_repeat Simple_repeat 2 84 0 5 824 310 286 55 20 chr17 31337498 31337597 -63935054 - PB1D10 SINE Alu -6 111 13 5 824 471 35 0 0 chr17 31337831 31337888 -63934763 + (GA)n Simple_repeat Simple_repeat 1 57 0 5 824 1399 260 82 16 chr17 31337909 31338335 -63934316 + RMER5 LTR ERV1 79 532 -2 5 824 301 55 0 52 chr17 31338501 31338559 -63934092 + (CAAAAA)n Simple_repeat Simple_repeat 1 55 0 5 824 580 275 71 48 chr17 31338725 31338893 -63933758 + B3A SINE B2 27 198 0 5 824 411 21 0 0 chr17 31338916 31338964 -63933687 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 824 4468 145 82 54 chr17 31338966 31339893 -63932758 - RMER17B LTR ERVK -4 954 2 5 824 582 190 0 0 chr17 31339903 31340024 -63932627 + (TA)n Simple_repeat Simple_repeat 1 121 0 5 824 34 0 0 0 chr17 31340033 31340067 -63932584 + AT_rich Low_complexity Low_complexity 1 34 0 5 824 302 274 119 42 chr17 31340139 31340257 -63932394 + L1MEd LINE L1 986 1112 -5024 5 824 1041 80 73 0 chr17 31340271 31340408 -63932243 + B1_Mus2 SINE Alu 1 147 0 5 824 453 66 0 0 chr17 31340537 31340598 -63932053 + (TG)n Simple_repeat Simple_repeat 1 61 0 5 824 632 253 9 25 chr17 31340834 31340980 -63931671 + B3 SINE B2 67 205 -11 5 824 496 293 15 29 chr17 31341011 31341148 -63931503 + ID_B1 SINE B4 79 213 -11 5 824 290 234 27 27 chr17 31341151 31341300 -63931351 + (TTTA)n Simple_repeat Simple_repeat 1 149 0 5 824 21 57 0 0 chr17 31341312 31341347 -63931304 + AT_rich Low_complexity Low_complexity 1 35 0 5 824 511 288 26 33 chr17 31341367 31341518 -63931133 + RSINE1 SINE B4 16 165 0 5 824 212 281 138 90 chr17 31341518 31341555 -63931096 + B3 SINE B2 15 211 -5 5 824 349 256 128 0 chr17 31341578 31341695 -63930956 + L1MEd LINE L1 4453 4584 -1562 5 824 380 315 216 38 chr17 31341775 31342062 -63930589 - L1ME1 LINE L1 0 6179 5842 5 824 236 259 33 56 chr17 31342113 31342203 -63930448 - L1ME1 LINE L1 -384 5780 5693 5 824 531 74 0 0 chr17 31342211 31342292 -63930359 + (TTTTTG)n Simple_repeat Simple_repeat 2 82 0 5 824 397 344 40 38 chr17 31342294 31342614 -63930037 - L1ME1 LINE L1 -481 5683 5364 5 824 288 326 49 57 chr17 31342696 31342940 -63929711 - L1MC LINE L1 -919 5227 4986 5 824 236 30 30 0 chr17 31343523 31343556 -63929095 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 5 824 239 217 43 0 chr17 31343705 31343774 -63928877 + L1M5 LINE L1 5821 5892 -348 5 824 309 265 0 14 chr17 31343780 31343849 -63928802 + ID4 SINE ID 16 83 0 5 824 1089 106 0 0 chr17 31343856 31344036 -63928615 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 5 824 180 0 0 0 chr17 31344036 31344056 -63928595 + (GGGGA)n Simple_repeat Simple_repeat 1 20 0 5 824 1104 133 0 0 chr17 31344056 31344236 -63928415 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 5 824 357 319 156 0 chr17 31344268 31344428 -63928223 - MER20 DNA MER1_type 0 219 35 5 824 204 97 0 0 chr17 31347037 31347068 -63925583 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 824 240 35 0 0 chr17 31347068 31347097 -63925554 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 824 557 252 24 83 chr17 31347527 31347696 -63924955 - MTE2b LTR MaLR -33 346 188 5 824 342 330 0 65 chr17 31347760 31347883 -63924768 - MTE2b LTR MaLR -227 152 38 5 824 335 229 45 50 chr17 31348106 31348345 -63924306 + (CAGA)n Simple_repeat Simple_repeat 1 237 0 5 824 233 264 70 29 chr17 31348382 31348554 -63924097 + (CAGG)n Simple_repeat Simple_repeat 1 179 0 5 824 1939 168 42 14 chr17 31348897 31349253 -63923398 + ORR1C1 LTR MaLR 1 366 -12 5 824 394 229 91 9 chr17 31349983 31350093 -63922558 + PB1D7 SINE Alu 1 119 -1 5 824 1105 59 0 0 chr17 31350189 31350324 -63922327 - B1_Mus1 SINE Alu 0 148 14 5 824 193 298 128 23 chr17 31350961 31351047 -63921604 + L2b LINE L2 3031 3125 -250 5 824 723 244 107 15 chr17 31352361 31352557 -63920094 + ID_B1 SINE B4 4 217 -7 5 824 999 104 18 0 chr17 31352563 31352727 -63919924 + (GA)n Simple_repeat Simple_repeat 2 168 0 5 824 1043 290 51 40 chr17 31352808 31353203 -63919448 + MLT1C LTR MaLR 51 449 -18 5 824 899 261 9 18 chr17 31354257 31354483 -63918168 + ID_B1 SINE B4 1 224 0 5 824 439 265 6 23 chr17 31355581 31355934 -63916717 + (TGGA)n Simple_repeat Simple_repeat 1 346 0 5 824 628 177 6 6 chr17 31355927 31356103 -63916548 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 5 824 270 125 0 0 chr17 31356103 31356151 -63916500 + (CATA)n Simple_repeat Simple_repeat 1 48 0 5 824 186 167 0 0 chr17 31356260 31356296 -63916355 + (TGGG)n Simple_repeat Simple_repeat 2 37 0 5 824 458 270 18 0 chr17 31357093 31357204 -63915447 - MLT1E1A LTR MaLR -129 551 439 5 824 528 272 30 42 chr17 31357245 31357410 -63915241 - MLT1E1A-int LTR MaLR -985 504 342 5 824 2059 140 17 32 chr17 31357429 31357836 -63914815 - RMER17C LTR ERVK -9 401 1 5 824 372 22 0 0 chr17 31358028 31358073 -63914578 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 824 21 0 0 0 chr17 31358378 31358399 -63914252 + AT_rich Low_complexity Low_complexity 1 21 0 5 824 523 232 12 107 chr17 31358575 31358744 -63913907 - ID_B1 SINE B4 -31 193 41 5 824 351 60 0 0 chr17 31359097 31359147 -63913504 + (A)n Simple_repeat Simple_repeat 1 50 0 5 824 449 269 19 0 chr17 31359690 31359794 -63912857 + PB1D9 SINE Alu 5 110 -10 5 824 305 263 147 119 chr17 31360417 31360688 -63911963 + MLT1B LTR MaLR 2 342 -48 5 824 1111 242 0 0 chr17 31361398 31361609 -63911042 + B3 SINE B2 1 211 -5 5 824 264 300 0 16 chr17 31362003 31362064 -63910587 + ID4 SINE ID 11 70 -13 5 824 303 300 438 0 chr17 31362064 31362149 -63910502 + ID_B1 SINE B4 11 220 -4 5 824 1246 98 15 21 chr17 31362169 31362377 -63910274 + B2_Mm2 SINE B2 1 203 -13 5 824 189 107 0 0 chr17 31362377 31362405 -63910246 + (CATATA)n Simple_repeat Simple_repeat 1 28 0 5 824 183 205 0 0 chr17 31363174 31363213 -63909438 + GA-rich Low_complexity Low_complexity 1 39 0 5 824 438 79 0 0 chr17 31363309 31363372 -63909279 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 824 455 291 78 111 chr17 31364376 31364684 -63907967 - MLT2C2 LTR ERVL -14 383 77 6 824 446 279 16 24 chr17 31364700 31364825 -63907826 + PB1 SINE Alu 1 124 -3 6 824 2910 180 9 4 chr17 31365304 31365828 -63906823 - RLTR11A2 LTR ERVK 0 527 1 6 824 477 0 0 0 chr17 31366011 31366064 -63906587 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 824 297 322 61 92 chr17 31366203 31366564 -63906087 - ORR1D2 LTR MaLR 0 378 40 6 824 744 197 13 45 chr17 31366578 31366732 -63905919 + B1F SINE Alu 1 149 0 6 824 259 215 25 12 chr17 31366732 31366812 -63905839 + GA-rich Low_complexity Low_complexity 3 83 0 6 824 761 199 6 0 chr17 31366830 31367001 -63905650 + GA-rich Low_complexity Low_complexity 3 174 0 6 824 622 343 64 8 chr17 31367003 31367253 -63905398 + MER2 DNA MER2_type 82 345 0 6 824 407 141 0 13 chr17 31367510 31367589 -63905062 + GA-rich Low_complexity Low_complexity 4 81 0 6 824 510 96 0 0 chr17 31367609 31367682 -63904969 + (TAGA)n Simple_repeat Simple_repeat 1 73 0 6 824 333 233 0 0 chr17 31367685 31367745 -63904906 - ORR1D2 LTR MaLR -310 60 1 6 824 921 40 31 16 chr17 31367915 31368043 -63904608 + B2_Mm1t SINE B2 61 190 -3 6 824 285 98 0 0 chr17 31368045 31368086 -63904565 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 6 824 464 213 56 0 chr17 31368088 31368196 -63904455 - RLTR42-int LTR ERVK -4162 1360 1247 6 824 208 216 0 0 chr17 31368682 31368719 -63903932 - MIR SINE MIR -148 114 78 6 824 241 259 118 59 chr17 31369433 31369487 -63903164 - MIR SINE MIR -90 172 113 6 824 1964 164 12 96 chr17 31369487 31369906 -63902745 - ORR1C2 LTR MaLR 0 384 1 6 824 241 217 93 80 chr17 31369906 31369981 -63902670 - MIR SINE MIR -150 118 43 6 824 1333 253 3 7 chr17 31370073 31370363 -63902288 + B4 SINE B4 4 292 0 6 824 263 214 0 28 chr17 31370375 31370481 -63902170 + (CA)n Simple_repeat Simple_repeat 1 103 0 6 824 298 305 87 82 chr17 31371021 31371228 -63901423 - MLT1B LTR MaLR -84 306 99 6 824 899 189 0 4 chr17 31371282 31371521 -63901130 + (TA)n Simple_repeat Simple_repeat 1 237 0 6 824 390 91 0 0 chr17 31371521 31371576 -63901075 + (CATA)n Simple_repeat Simple_repeat 2 56 0 6 824 400 311 130 0 chr17 31371951 31372125 -63900526 - MLT1E3 LTR MaLR -168 459 269 6 824 280 321 103 74 chr17 31372191 31372366 -63900285 - MLT1E3 LTR MaLR -499 181 2 6 824 1454 200 44 10 chr17 31373518 31373816 -63898835 - MTD LTR MaLR 0 419 112 6 824 556 231 67 0 chr17 31373815 31373919 -63898732 + B1_Mur2 SINE Alu 5 115 -34 6 824 448 153 151 12 chr17 31373913 31373999 -63898652 - MTD LTR MaLR -310 109 12 6 824 309 265 164 15 chr17 31374376 31374510 -63898141 - MER31A LTR ERV1 -231 254 101 6 824 2020 89 38 116 chr17 31375111 31375456 -63897195 - ORR1A2 LTR MaLR -2 325 8 6 824 397 260 19 39 chr17 31376927 31377031 -63895620 + PB1 SINE Alu 1 102 -25 6 824 268 197 66 0 chr17 31377043 31377119 -63895532 + GA-rich Low_complexity Low_complexity 4 84 0 6 824 1369 61 33 0 chr17 31377500 31377681 -63894970 + B2_Mm1a SINE B2 1 187 -6 6 824 453 314 105 69 chr17 31378919 31379281 -63893370 - MLT1D LTR MaLR -130 375 1 6 824 204 182 0 0 chr17 31379808 31379852 -63892799 + GA-rich Low_complexity Low_complexity 2 45 0 6 824 317 247 89 11 chr17 31380230 31380320 -63892331 + MLT1B LTR MaLR 4 100 -290 6 824 267 146 0 0 chr17 31380357 31380412 -63892239 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 824 861 174 357 72 chr17 31380485 31380776 -63891875 - ORR1D1 LTR MaLR 0 374 1 6 824 2001 148 25 0 chr17 31380781 31381099 -63891552 + ORR1A4 LTR MaLR 1 326 -3 6 824 255 320 0 26 chr17 31381104 31381181 -63891470 - RSINE1 SINE B4 -87 78 4 6 824 1176 68 7 0 chr17 31381212 31381358 -63891293 + B1_Mus2 SINE Alu 1 147 0 6 824 1893 173 64 20 chr17 31381359 31381745 -63890906 + ORR1C1 LTR MaLR 19 378 0 6 824 1507 38 32 0 chr17 31381745 31381930 -63890721 + B2_Mm1t SINE B2 2 192 -1 6 824 344 278 18 117 chr17 31381930 31382006 -63890645 + ORR1C1 LTR MaLR 226 300 -90 6 824 303 390 8 0 chr17 31382167 31382290 -63890361 + MER2B DNA MER2_type 212 335 -1 6 824 228 67 0 0 chr17 31382810 31382840 -63889811 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 6 824 366 107 0 0 chr17 31382972 31383028 -63889623 + (GAAAA)n Simple_repeat Simple_repeat 3 58 0 6 824 604 261 119 5 chr17 31383181 31383366 -63889285 - Tigger1 DNA MER2_type 0 2418 2213 6 824 1237 41 7 0 chr17 31383366 31383512 -63889139 + B1_Mus1 SINE Alu 1 147 -1 6 824 359 145 14 0 chr17 31383517 31383586 -63889065 + (TA)n Simple_repeat Simple_repeat 2 71 0 6 824 682 180 44 124 chr17 31383799 31384066 -63888585 + ORR1C1 LTR MaLR 1 231 -136 6 824 283 121 85 17 chr17 31384116 31384175 -63888476 + ORR1E LTR MaLR 7 69 -290 6 824 915 208 123 49 chr17 31384218 31384461 -63888190 - MTD LTR MaLR -78 341 81 6 824 1474 238 90 22 chr17 31384488 31384943 -63887708 + RLTR20C LTR ERVK 49 534 0 6 824 257 215 36 0 chr17 31384960 31385024 -63887627 - MTD LTR MaLR -350 69 6 6 824 444 307 74 40 chr17 31385094 31385157 -63887494 + L1M5 LINE L1 2516 2590 -3556 6 824 840 92 0 0 chr17 31385157 31385276 -63887375 + (GAAA)n Simple_repeat Simple_repeat 4 122 0 6 824 444 307 74 40 chr17 31385276 31385562 -63887089 + L1M5 LINE L1 2591 2877 -3269 6 824 674 189 0 62 chr17 31385629 31385759 -63886892 + RSINE1 SINE B4 44 165 0 6 824 334 200 185 22 chr17 31386289 31386381 -63886270 - RLTR23 LTR ERV1 0 430 324 6 824 871 223 150 12 chr17 31386437 31386691 -63885960 + RLTR22_Mus LTR ERVK 422 710 -1098 6 824 3426 80 7 20 chr17 31386691 31387238 -63885413 - L1VL2 LINE L1 -1791 1824 1285 6 824 2050 46 0 121 chr17 31387238 31387561 -63885090 - RLTR10B LTR ERVK 0 292 9 6 824 340 24 0 0 chr17 31387569 31387611 -63885040 - RLTR10B LTR ERVK -250 42 1 6 824 5159 48 23 7 chr17 31387611 31388559 -63884092 - L1VL2 LINE L1 -2325 1290 326 6 824 383 188 37 119 chr17 31388559 31388668 -63883983 + MT2B LTR ERVL 158 257 -344 6 824 844 153 0 0 chr17 31388576 31388713 -63883938 + B1_Mur4 SINE Alu 14 150 0 6 824 440 268 119 21 chr17 31388713 31388907 -63883744 + L1MC LINE L1 3121 3333 -2813 6 824 343 219 172 17 chr17 31389026 31389142 -63883509 + B1F2 SINE Alu 16 149 0 6 824 551 233 11 11 chr17 31389179 31389357 -63883294 + G-rich Low_complexity Low_complexity 1 178 0 6 824 236 258 97 0 chr17 31389375 31389437 -63883214 + ID4 SINE ID 16 83 0 6 824 336 318 156 19 chr17 31389533 31389796 -63882855 + MER44A DNA MER2_type 7 305 -34 6 824 246 245 206 0 chr17 31390885 31390987 -63881664 + MER5A DNA MER1_type 39 161 -28 6 824 225 290 0 0 chr17 31392168 31392261 -63880390 + A-rich Low_complexity Low_complexity 1 93 0 6 824 1175 58 0 0 chr17 31392323 31392460 -63880191 + B1_Mus1 SINE Alu 2 138 -10 6 824 243 0 0 0 chr17 31392460 31392487 -63880164 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 824 873 100 252 7 chr17 31392504 31392655 -63879996 + B2_Mm2 SINE B2 1 188 -7 6 824 1119 97 0 0 chr17 31392664 31392808 -63879843 + B1_Mus2 SINE Alu 4 147 0 6 824 1240 92 46 6 chr17 31392820 31392994 -63879657 - B2_Mm2 SINE B2 -14 181 1 6 824 1446 75 21 0 chr17 31393932 31394119 -63878532 + B2_Mm2 SINE B2 2 192 -3 6 824 1842 173 58 50 chr17 31394166 31394195 -63878456 + ORR1B2 LTR MaLR 1 28 -339 6 824 1266 99 44 6 chr17 31394195 31394378 -63878273 + B2_Mm2 SINE B2 2 191 -4 6 824 1842 173 58 50 chr17 31394378 31394712 -63877939 + ORR1B2 LTR MaLR 29 367 0 6 824 282 348 29 94 chr17 31396128 31396299 -63876352 - MER5A DNA MER1_type -22 167 8 6 824 296 257 109 50 chr17 31396649 31396768 -63875883 + MLT1C LTR MaLR 2 127 -340 6 824 285 252 159 37 chr17 31396776 31396883 -63875768 - ORR1E LTR MaLR 0 374 255 6 824 378 0 0 0 chr17 31397128 31397170 -63875481 + (GAAAA)n Simple_repeat Simple_repeat 3 44 0 6 824 249 274 46 35 chr17 31397226 31397313 -63875338 + Tigger7 DNA MER2_type 2256 2343 -148 6 824 234 0 0 0 chr17 31397456 31397482 -63875169 + (A)n Simple_repeat Simple_repeat 1 26 0 6 824 1240 175 0 22 chr17 31397670 31397898 -63874753 - URR1A DNA MER1_type 0 226 4 6 824 1312 27 0 0 chr17 31398834 31398981 -63873670 - B1_Mus2 SINE Alu 0 147 1 6 824 732 64 300 0 chr17 31399180 31399290 -63873361 + B1_Mus2 SINE Alu 1 143 -4 6 824 555 56 0 0 chr17 31399291 31399362 -63873289 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 6 824 423 271 155 0 chr17 31399484 31399613 -63873038 - RSINE1 SINE B4 -15 150 2 6 824 1013 97 27 40 chr17 31400493 31400643 -63872008 + B1_Mus1 SINE Alu 1 148 0 6 824 257 91 45 0 chr17 31400643 31400687 -63871964 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 6 824 1156 256 103 24 chr17 31400912 31401292 -63871359 + MTD LTR MaLR 9 418 -1 6 824 270 228 25 25 chr17 31403461 31403542 -63869109 + Arthur1B DNA Tip100 137 217 -1008 6 824 253 258 59 82 chr17 31404108 31404243 -63868408 + Arthur1B DNA Tip100 829 948 -277 6 824 247 217 33 0 chr17 31404257 31404317 -63868334 + ID4_ SINE ID 21 82 -1 6 824 270 0 0 0 chr17 31405302 31405332 -63867319 + (A)n Simple_repeat Simple_repeat 1 30 0 6 824 260 363 111 18 chr17 31405573 31405744 -63866907 - MER21B LTR ERV1 -260 603 417 6 824 249 191 0 0 chr17 31406253 31406295 -63866356 + B1_Mus2 SINE Alu 90 131 -16 6 824 2544 87 0 0 chr17 31406700 31407023 -63865628 + ORR1A2 LTR MaLR 1 323 -4 6 824 323 299 85 16 chr17 31407106 31407235 -63865416 + ORR1E LTR MaLR 1 138 -221 6 824 5359 115 28 54 chr17 31407235 31408165 -63864486 + RMER17A2 LTR ERVK 1 906 0 6 824 272 253 44 33 chr17 31408180 31408270 -63864381 + RLTR9A2 LTR ERVK 1 91 -277 6 824 278 265 74 19 chr17 31408349 31408492 -63864159 + RLTR9A2 LTR ERVK 219 382 -27 6 824 696 200 181 11 chr17 31408504 31408681 -63863970 + B3 SINE B2 1 207 -9 6 824 1254 55 0 0 chr17 31408738 31408884 -63863767 - B1_Mus1 SINE Alu -1 147 2 6 824 1395 105 16 0 chr17 31409019 31409210 -63863441 + B2_Mm2 SINE B2 1 194 -1 6 824 197 65 32 0 chr17 31409210 31409241 -63863410 + (GAAA)n Simple_repeat Simple_repeat 1 32 0 7 824 1100 54 0 0 chr17 31409946 31410075 -63862576 + B1_Mus2 SINE Alu 1 129 -18 7 824 962 234 9 32 chr17 31411052 31411273 -63861378 + B3 SINE B2 1 216 0 7 824 285 277 0 0 chr17 31411361 31411426 -63861225 + ID4_ SINE ID 3 67 -16 7 824 256 102 41 0 chr17 31411449 31411498 -63861153 + (GA)n Simple_repeat Simple_repeat 2 52 0 7 824 395 300 6 0 chr17 31411501 31411661 -63860990 + (CA)n Simple_repeat Simple_repeat 2 162 0 7 824 256 256 43 75 chr17 31411677 31411770 -63860881 + PB1 SINE Alu 35 124 -3 7 824 23 33 0 0 chr17 31411961 31411991 -63860660 + AT_rich Low_complexity Low_complexity 1 30 0 7 824 1376 233 69 47 chr17 31412125 31412486 -63860165 + ORR1D2 LTR MaLR 1 369 -1 7 824 688 71 71 0 chr17 31412843 31412998 -63859653 + (TG)n Simple_repeat Simple_repeat 1 166 0 7 824 547 197 227 45 chr17 31413067 31413292 -63859359 - B4A SINE B4 -20 272 7 7 824 348 24 0 0 chr17 31415409 31415450 -63857201 + (CA)n Simple_repeat Simple_repeat 1 41 0 7 824 525 255 172 38 chr17 31415584 31415869 -63856782 + MTD LTR MaLR 11 378 -1 7 824 465 244 87 0 chr17 31416944 31417071 -63855580 - MER89 LTR ERV1 -15 544 407 7 824 287 270 42 201 chr17 31417102 31417130 -63855521 - MER89 LTR ERV1 -252 307 282 7 824 474 234 159 6 chr17 31417130 31417293 -63855358 - B2_Mm2 SINE B2 -7 188 1 7 824 287 270 42 201 chr17 31417293 31417408 -63855243 - MER89 LTR ERV1 -278 281 187 7 824 335 240 146 0 chr17 31417409 31417505 -63855146 - ID_B1 SINE B4 -2 222 113 7 824 225 276 101 48 chr17 31417729 31417944 -63854707 + MIRb SINE MIR 24 253 -15 7 824 222 95 8 0 chr17 31418144 31418204 -63854447 + (TTTG)n Simple_repeat Simple_repeat 1 60 0 7 824 1223 54 7 0 chr17 31418204 31418351 -63854300 - B1_Mus1 SINE Alu 0 148 1 7 824 185 140 20 0 chr17 31418351 31418377 -63854274 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 7 824 993 71 250 6 chr17 31419177 31419333 -63853318 + B2_Mm2 SINE B2 1 194 -1 7 824 1029 227 116 15 chr17 31420280 31420616 -63852035 - ORR1D2 LTR MaLR 0 370 1 7 824 276 232 43 14 chr17 31420649 31420719 -63851932 - ID4_ SINE ID -10 73 2 7 824 2035 66 122 0 chr17 31420767 31421053 -63851598 - ORR1A2 LTR MaLR -6 321 1 7 824 8260 24 0 0 chr17 31421274 31422497 -63850154 - L1Md_T LINE L1 -2 6580 5358 7 824 855 125 0 0 chr17 31422579 31422747 -63849904 + (TTTC)n Simple_repeat Simple_repeat 4 171 0 7 824 1066 29 21 41 chr17 31423275 31423420 -63849231 - B1_Mm SINE Alu 0 147 6 7 824 333 254 25 127 chr17 31423309 31423467 -63849184 - MT2B2 LTR ERVL -320 264 123 7 824 192 40 0 0 chr17 31423538 31423563 -63849088 + (TG)n Simple_repeat Simple_repeat 2 26 0 7 824 1124 89 36 0 chr17 31423785 31423953 -63848698 + B2_Mm1a SINE B2 20 193 0 7 824 1662 235 38 5 chr17 31424099 31424493 -63848158 - RLTR16 LTR ERVK -97 408 2 7 824 701 298 42 39 chr17 31424557 31424840 -63847811 + Lx8 LINE L1 6416 6699 -774 7 824 817 131 78 28 chr17 31424852 31424994 -63847657 + B1_Mur4 SINE Alu 2 150 0 7 824 32 0 0 0 chr17 31425024 31425056 -63847595 + AT_rich Low_complexity Low_complexity 1 32 0 7 824 1084 114 31 42 chr17 31425139 31425293 -63847358 + B2_Mm1a SINE B2 3 158 -35 7 824 423 0 0 0 chr17 31425293 31425340 -63847311 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 7 824 1084 114 31 42 chr17 31425340 31425355 -63847296 + B2_Mm1a SINE B2 159 170 -23 7 824 288 0 0 0 chr17 31425355 31425387 -63847264 + (GA)n Simple_repeat Simple_repeat 2 33 0 7 824 1267 48 0 0 chr17 31425388 31425535 -63847116 + B1_Mus2 SINE Alu 1 147 0 7 824 1084 114 31 42 chr17 31425535 31425554 -63847097 + B2_Mm1a SINE B2 171 192 -1 7 824 1049 248 115 46 chr17 31425754 31426101 -63846550 - MTEb LTR MaLR -8 371 1 7 824 473 246 81 71 chr17 31426259 31426473 -63846178 - ORR1D1 LTR MaLR -8 366 157 7 824 333 0 0 0 chr17 31426841 31426878 -63845773 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 7 824 407 295 0 10 chr17 31426878 31426974 -63845677 - PB1D7 SINE Alu -10 110 16 7 824 263 291 34 34 chr17 31427263 31427352 -63845299 - L2a LINE L2 -5 3421 3333 7 824 304 192 0 75 chr17 31427373 31427480 -63845171 + C-rich Low_complexity Low_complexity 4 102 0 7 824 230 139 150 100 chr17 31427705 31427785 -63844866 + RLTR25B LTR ERVK 426 509 -519 7 824 851 9 57 0 chr17 31427723 31427828 -63844823 + B1_Mus1 SINE Alu 38 148 0 7 824 694 161 194 0 chr17 31429094 31429218 -63843433 + B1_Mur3 SINE Alu 1 148 -1 7 824 330 26 0 0 chr17 31429319 31429358 -63843293 + (TTCC)n Simple_repeat Simple_repeat 1 39 0 7 824 708 163 0 0 chr17 31429360 31429489 -63843162 + CT-rich Low_complexity Low_complexity 2 130 0 7 824 24 32 0 0 chr17 31429493 31429524 -63843127 + AT_rich Low_complexity Low_complexity 1 31 0 7 824 212 208 20 20 chr17 31429623 31429672 -63842979 + PB1D10 SINE Alu 28 76 -41 7 824 1298 34 0 0 chr17 31430519 31430666 -63841985 + B1_Mm SINE Alu 1 147 0 7 824 1054 65 65 0 chr17 31431328 31431467 -63841184 + B1_Mus1 SINE Alu 1 148 0 7 824 22 56 0 0 chr17 31433055 31433091 -63839560 + GC_rich Low_complexity Low_complexity 1 36 0 7 824 824 136 265 28 chr17 31434937 31435118 -63837533 - URR1A DNA MER1_type 0 226 3 7 824 1163 62 0 14 chr17 31435208 31435355 -63837296 - B1_Mm SINE Alu -2 145 1 7 824 588 241 14 35 chr17 31435898 31436040 -63836611 - B1F1 SINE Alu -4 145 7 7 824 373 304 28 62 chr17 31435930 31436074 -63836577 - B4 SINE B4 -87 205 67 7 824 1514 256 19 22 chr17 31437721 31438085 -63834566 - ORR1D2 LTR MaLR -7 363 1 7 824 381 218 26 0 chr17 31438374 31438452 -63834199 - ID4 SINE ID -2 81 2 7 824 257 321 108 23 chr17 31438452 31438666 -63833985 - MER34A LTR ERV1 -19 552 321 7 824 480 48 0 0 chr17 31438783 31438846 -63833805 + (TG)n Simple_repeat Simple_repeat 2 64 0 7 824 1167 69 14 0 chr17 31439105 31439249 -63833402 - B1_Mm SINE Alu 0 147 2 7 824 311 156 76 30 chr17 31439412 31439478 -63833173 + ID4_ SINE ID 4 72 -11 7 824 277 333 59 20 chr17 31439537 31439739 -63832912 - L1MC4 LINE L1 -369 7673 7464 7 824 294 297 49 10 chr17 31440548 31440650 -63832001 - MTEa LTR MaLR -7 372 267 7 824 388 288 90 26 chr17 31441305 31441386 -63831265 - MLT1C LTR MaLR -194 273 182 7 824 879 196 0 0 chr17 31441386 31441534 -63831117 - B1_Mur2 SINE Alu 0 149 2 7 824 388 288 90 26 chr17 31441534 31441641 -63831010 - MLT1C LTR MaLR -286 181 73 7 824 489 34 0 0 chr17 31442690 31442749 -63829902 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 824 215 197 0 57 chr17 31443015 31443085 -63829566 + T-rich Low_complexity Low_complexity 4 69 0 7 824 264 292 33 22 chr17 31443421 31443512 -63829139 + MER21B LTR ERV1 485 576 -287 7 824 281 47 0 23 chr17 31443727 31443771 -63828880 + (CAAAAA)n Simple_repeat Simple_repeat 2 44 0 7 824 1082 68 0 0 chr17 31443946 31444094 -63828557 + B2_Mm2 SINE B2 2 149 -46 7 824 1700 21 5 0 chr17 31444424 31444615 -63828036 - B2_Mm1t SINE B2 0 193 2 7 824 1326 76 43 11 chr17 31445918 31446105 -63826546 - B2_Mm2 SINE B2 -1 194 2 7 824 22 0 0 0 chr17 31446107 31446129 -63826522 + AT_rich Low_complexity Low_complexity 1 22 0 7 824 916 239 25 5 chr17 31446140 31446342 -63826309 - B3 SINE B2 -10 206 1 7 824 216 250 0 0 chr17 31447050 31447098 -63825553 + GA-rich Low_complexity Low_complexity 3 50 0 7 824 208 0 0 59 chr17 31447152 31447186 -63825465 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 7 824 660 226 0 29 chr17 31447314 31447451 -63825200 - B1_Mus2 SINE Alu -13 134 2 7 824 623 208 34 34 chr17 31447522 31447671 -63824980 + B1F2 SINE Alu 1 149 0 7 824 1105 84 0 0 chr17 31447678 31447820 -63824831 - B1_Mus1 SINE Alu -2 146 5 7 824 28 48 0 0 chr17 31447833 31447875 -63824776 + AT_rich Low_complexity Low_complexity 1 42 0 7 824 295 225 124 29 chr17 31448363 31448468 -63824183 - PB1D10 SINE Alu -2 115 1 7 824 375 23 0 0 chr17 31448639 31448683 -63823968 + (TATG)n Simple_repeat Simple_repeat 1 44 0 7 824 520 287 39 0 chr17 31448689 31448818 -63823833 - RSINE1 SINE B4 -31 134 1 7 824 180 254 0 0 chr17 31448861 31448920 -63823731 + (TATG)n Simple_repeat Simple_repeat 3 61 0 7 824 230 350 30 40 chr17 31449004 31449105 -63823546 - B1_Mur1 SINE Alu -20 129 30 7 824 584 275 22 55 chr17 31449018 31449199 -63823452 - B4 SINE B4 -91 201 27 7 824 475 153 10 10 chr17 31450724 31450823 -63821828 + CT-rich Low_complexity Low_complexity 3 101 0 7 824 1206 68 0 0 chr17 31450843 31450990 -63821661 - B1_Mus1 SINE Alu 0 148 2 7 824 983 122 0 6 chr17 31451524 31451697 -63820954 + (TAGA)n Simple_repeat Simple_repeat 1 172 0 7 824 273 89 0 0 chr17 31451698 31451743 -63820908 + (CATA)n Simple_repeat Simple_repeat 4 48 0 7 824 266 349 149 0 chr17 31451792 31452027 -63820624 - L1ME3 LINE L1 0 6162 5893 7 824 263 293 0 128 chr17 31453348 31453442 -63819209 + ID4_ SINE ID 2 83 0 7 824 675 184 34 69 chr17 31454615 31454790 -63817861 - B3A SINE B2 -29 169 1 7 824 1112 92 0 30 chr17 31455341 31455510 -63817141 - B2_Mm2 SINE B2 -5 190 27 7 824 255 60 39 20 chr17 31455518 31455569 -63817082 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 7 824 1194 56 0 0 chr17 31455570 31455714 -63816937 - B1_Mus1 SINE Alu -1 147 4 7 824 278 54 0 0 chr17 31455720 31455757 -63816894 - B2_Mm2 SINE B2 -157 38 2 7 824 367 373 7 0 chr17 31456714 31456856 -63815795 - MER2 DNA MER2_type -42 303 161 7 825 393 240 139 10 chr17 31457504 31457605 -63815046 - PB1D7 SINE Alu -6 114 1 8 825 333 0 0 0 chr17 31457622 31457659 -63814992 + (TG)n Simple_repeat Simple_repeat 1 37 0 8 825 443 288 17 0 chr17 31457667 31457785 -63814866 - PB1 SINE Alu -7 120 1 8 825 185 0 40 0 chr17 31458943 31458968 -63813683 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 8 825 240 111 0 0 chr17 31458965 31459001 -63813650 + (T)n Simple_repeat Simple_repeat 1 36 0 8 825 1528 69 26 0 chr17 31459812 31460001 -63812650 + B2_Mm2 SINE B2 1 194 -1 8 825 42 0 0 0 chr17 31460010 31460052 -63812599 + AT_rich Low_complexity Low_complexity 1 42 0 8 825 341 332 156 5 chr17 31463689 31463907 -63808744 + L1M4 LINE L1 5121 5371 -775 8 825 229 277 35 24 chr17 31463993 31464078 -63808573 + L1M4 LINE L1 5495 5580 -600 8 825 322 331 164 18 chr17 31464074 31464354 -63808297 + L1MB7 LINE L1 5609 5929 -255 8 825 835 138 136 13 chr17 31464660 31464814 -63807837 + B2_Mm2 SINE B2 2 174 -21 8 825 857 204 49 44 chr17 31464819 31464855 -63807796 - B3 SINE B2 -10 206 174 8 825 216 0 0 0 chr17 31464855 31464879 -63807772 + (TC)n Simple_repeat Simple_repeat 2 25 0 8 825 857 204 49 44 chr17 31464879 31465047 -63807604 - B3 SINE B2 -43 173 1 8 825 201 143 0 0 chr17 31465235 31465270 -63807381 + (C)n Simple_repeat Simple_repeat 1 35 0 8 825 24 53 0 0 chr17 31465441 31465479 -63807172 + AT_rich Low_complexity Low_complexity 1 38 0 8 825 293 284 48 10 chr17 31466336 31466379 -63806272 - RMER30 DNA MER1_type -94 108 66 8 825 287 0 53 0 chr17 31466379 31466417 -63806234 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 8 825 293 284 48 10 chr17 31466417 31466476 -63806175 - RMER30 DNA MER1_type -137 65 3 8 825 189 0 0 0 chr17 31467303 31467324 -63805327 + (CACG)n Simple_repeat Simple_repeat 2 22 0 8 825 2063 121 7 7 chr17 31467331 31467631 -63805020 + Lx4A LINE L1 6759 7058 0 8 825 744 236 108 20 chr17 31468343 31468538 -63804113 - B3 SINE B2 -4 212 1 8 825 287 273 78 55 chr17 31469067 31469126 -63803525 + RMER30 DNA MER1_type 38 100 -102 8 825 324 0 0 0 chr17 31469126 31469162 -63803489 + (CA)n Simple_repeat Simple_repeat 1 36 0 8 825 287 273 78 55 chr17 31469162 31469230 -63803421 + RMER30 DNA MER1_type 101 168 -34 8 825 30 45 0 0 chr17 31469368 31469412 -63803239 + AT_rich Low_complexity Low_complexity 1 44 0 8 825 1115 96 56 11 chr17 31469459 31469639 -63803012 - B2_Mm2 SINE B2 -7 188 1 8 825 212 189 0 0 chr17 31469689 31469726 -63802925 + T-rich Low_complexity Low_complexity 1 37 0 8 825 2937 72 43 10 chr17 31469803 31470197 -63802454 - MTB_Mm LTR MaLR 0 407 1 8 825 1164 88 53 37 chr17 31470234 31470422 -63802229 - B2_Mm2 SINE B2 0 195 5 8 825 822 92 0 16 chr17 31470823 31470944 -63801707 - B2_Mm2 SINE B2 -75 120 2 8 825 270 0 0 0 chr17 31471835 31471865 -63800786 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 825 315 0 0 0 chr17 31471865 31471899 -63800752 + (GA)n Simple_repeat Simple_repeat 1 35 0 8 825 977 276 19 26 chr17 31471946 31472217 -63800434 - B4A SINE B4 -22 270 2 8 825 1010 64 49 14 chr17 31472243 31472385 -63800266 - B1_Mm SINE Alu 0 147 1 8 825 429 70 0 0 chr17 31474013 31474070 -63798581 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 825 483 171 47 19 chr17 31474439 31474546 -63798105 + PB1D7 SINE Alu 11 120 0 8 825 1325 198 136 19 chr17 31476007 31476478 -63796173 - RLTR20B3 LTR ERVK 0 560 13 8 825 267 294 20 99 chr17 31478371 31478522 -63794129 - MLT1A LTR MaLR 0 374 236 8 825 434 18 18 0 chr17 31478581 31478636 -63794015 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 8 825 647 110 60 12 chr17 31478656 31478822 -63793829 + (TCTCTG)n Simple_repeat Simple_repeat 5 178 0 8 825 486 0 0 0 chr17 31478975 31479029 -63793622 + (TTC)n Simple_repeat Simple_repeat 2 55 0 8 825 257 78 0 56 chr17 31480805 31480859 -63791792 + (T)n Simple_repeat Simple_repeat 1 51 0 8 825 658 151 5 219 chr17 31480859 31480932 -63791719 - B1_Mus1 SINE Alu 0 148 75 8 825 1260 41 0 0 chr17 31480932 31481079 -63791572 + B1_Mus2 SINE Alu 1 147 0 8 825 658 151 5 219 chr17 31481079 31481192 -63791459 - B1_Mus1 SINE Alu -74 74 3 8 825 302 221 14 56 chr17 31482128 31482200 -63790451 - L1MC4a LINE L1 -11 7871 7803 8 825 285 335 22 49 chr17 31482210 31482395 -63790256 + (CATG)n Simple_repeat Simple_repeat 1 180 0 8 825 422 352 0 43 chr17 31482376 31482563 -63790088 + (CA)n Simple_repeat Simple_repeat 2 180 0 8 825 364 335 23 17 chr17 31482512 31482685 -63789966 + (CATA)n Simple_repeat Simple_repeat 2 175 0 8 825 189 107 0 0 chr17 31482690 31482718 -63789933 + (CATG)n Simple_repeat Simple_repeat 2 29 0 8 825 181 75 50 0 chr17 31483003 31483043 -63789608 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 8 825 673 178 102 15 chr17 31483045 31483182 -63789469 - B1_Mur2 SINE Alu 0 149 1 8 825 863 136 6 49 chr17 31483522 31483684 -63788967 - URR1B DNA MER1_type 0 225 71 8 825 807 273 15 10 chr17 31483946 31484142 -63788509 - B3A SINE B2 0 198 2 8 825 254 333 43 22 chr17 31484473 31484565 -63788086 + B1F SINE Alu 21 114 -35 8 825 586 248 56 7 chr17 31484555 31484620 -63788031 + ID SINE ID 17 88 -136 8 825 252 293 102 39 chr17 31484620 31484748 -63787903 + B1F1 SINE Alu 1 136 -13 8 825 22 0 0 0 chr17 31487632 31487654 -63784997 + AT_rich Low_complexity Low_complexity 1 22 0 8 825 942 249 109 92 chr17 31487756 31487823 -63784828 - MTEa LTR MaLR 0 379 333 8 825 1175 29 0 0 chr17 31487823 31487960 -63784691 - B1_Mus2 SINE Alu -9 138 2 8 825 942 249 109 92 chr17 31487960 31488250 -63784401 - MTEa LTR MaLR -47 332 16 8 825 39 50 0 0 chr17 31488250 31488310 -63784341 + AT_rich Low_complexity Low_complexity 1 60 0 8 825 385 276 56 31 chr17 31489408 31489569 -63783082 - Lx8 LINE L1 -247 7226 7062 8 825 1013 131 0 7 chr17 31489578 31489724 -63782927 - B1_Mus1 SINE Alu -1 147 3 8 825 378 0 0 0 chr17 31490030 31490072 -63782579 + (TC)n Simple_repeat Simple_repeat 2 43 0 8 825 271 96 0 37 chr17 31490219 31490273 -63782378 + (TA)n Simple_repeat Simple_repeat 2 53 0 8 825 338 259 0 12 chr17 31490590 31490672 -63781979 + ID4 SINE ID 2 82 -1 8 825 1068 259 196 3 chr17 31490928 31491245 -63781406 - MTEb LTR MaLR -1 378 1 8 825 2520 61 0 109 chr17 31491547 31491914 -63780737 - ORR1A2 LTR MaLR 0 327 1 8 825 233 229 97 44 chr17 31492708 31492936 -63779715 - RMER17C LTR ERVK -156 254 15 8 825 468 123 0 0 chr17 31493777 31493850 -63778801 - RLTR23 LTR ERV1 -25 405 333 8 825 261 0 0 0 chr17 31494686 31494715 -63777936 + (TG)n Simple_repeat Simple_repeat 1 29 0 8 825 614 272 0 20 chr17 31495357 31495507 -63777144 - B1_Mur1 SINE Alu 0 149 3 8 825 1078 241 130 16 chr17 31495775 31496091 -63776560 - ORR1E LTR MaLR -7 352 1 8 825 280 318 121 23 chr17 31496578 31496710 -63775941 + MLT1A LTR MaLR 19 163 -211 8 825 1398 65 43 5 chr17 31496715 31496900 -63775751 + B2_Mm2 SINE B2 1 192 -3 8 825 686 239 113 31 chr17 31496907 31497101 -63775550 + ID_B1 SINE B4 2 211 -13 8 825 591 195 122 0 chr17 31497165 31497288 -63775363 + B1_Mm SINE Alu 9 146 -1 8 825 312 120 0 0 chr17 31497292 31497342 -63775309 + (TTA)n Simple_repeat Simple_repeat 3 52 0 8 825 913 160 7 27 chr17 31497974 31498122 -63774529 + B1_Mur3 SINE Alu 4 148 -1 8 825 246 32 0 0 chr17 31498366 31498397 -63774254 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 825 254 319 118 25 chr17 31498752 31498871 -63773780 - MLT1C LTR MaLR -112 355 226 8 825 876 284 78 81 chr17 31499451 31499560 -63773091 + MTE2a LTR MaLR 9 112 -267 8 825 284 0 28 0 chr17 31499560 31499596 -63773055 + (TG)n Simple_repeat Simple_repeat 1 37 0 8 825 876 284 78 81 chr17 31499596 31499828 -63772823 + MTE2a LTR MaLR 113 349 -30 8 825 447 19 0 0 chr17 31499828 31499880 -63772771 + (TC)n Simple_repeat Simple_repeat 1 52 0 8 825 876 284 78 81 chr17 31499880 31499909 -63772742 + MTE2a LTR MaLR 350 379 0 8 825 736 135 161 58 chr17 31500856 31501014 -63771637 - B2_Mm2 SINE B2 -1 194 31 1 825 3113 121 47 16 chr17 31501014 31501526 -63771125 + RLTR11A LTR ERVK 1 528 0 2 825 736 119 182 59 chr17 31501526 31501557 -63771094 - B2_Mm2 SINE B2 -165 30 4 1 825 906 164 0 0 chr17 31501569 31501715 -63770936 - B1_Mus2 SINE Alu -1 146 1 3 825 1105 69 7 0 chr17 31501733 31501878 -63770773 - B1_Mus1 SINE Alu -1 147 2 4 825 527 213 191 31 chr17 31501946 31502100 -63770551 - RMER5 LTR ERV1 -309 225 59 5 825 180 0 0 0 chr17 31502100 31502120 -63770531 + (CAGT)n Simple_repeat Simple_repeat 4 23 0 6 825 527 213 191 31 chr17 31502120 31502159 -63770492 - RMER5 LTR ERV1 -476 58 1 5 825 355 293 183 64 chr17 31502219 31502547 -63770104 + MTEa LTR MaLR 13 379 0 7 825 1642 183 49 9 chr17 31503313 31503661 -63768990 + RLTR16 LTR ERVK 1 362 -143 8 825 238 214 36 0 chr17 31503807 31503863 -63768788 + CT-rich Low_complexity Low_complexity 2 59 0 9 825 733 150 87 13 chr17 31503980 31504037 -63768614 + RLTR16 LTR ERVK 346 401 -104 8 825 225 0 0 0 chr17 31504037 31504062 -63768589 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 825 733 150 87 13 chr17 31504062 31504153 -63768498 + RLTR16 LTR ERVK 402 503 -2 8 825 219 333 10 0 chr17 31504694 31504790 -63767861 + (TCCA)n Simple_repeat Simple_repeat 1 97 0 1 825 254 222 18 36 chr17 31504823 31504935 -63767716 + (TCCA)n Simple_repeat Simple_repeat 2 111 0 1 825 1021 203 268 6 chr17 31505063 31505395 -63767256 + MTD LTR MaLR 1 419 0 1 825 2764 144 69 71 chr17 31506190 31506781 -63765870 + RLTR18 LTR ERVK 1 590 -26 1 825 624 244 7 29 chr17 31506849 31506988 -63765663 + B3 SINE B2 12 147 -69 1 825 414 0 0 0 chr17 31506992 31507038 -63765613 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 825 500 220 50 62 chr17 31507039 31507199 -63765452 + RMER15 LTR ERVL 1 158 -417 1 825 534 249 264 33 chr17 31507203 31507415 -63765236 + RMER15 LTR ERVL 279 539 -36 1 825 1164 301 150 30 chr17 31507460 31507718 -63764933 + L1MC3 LINE L1 6882 7168 -617 1 825 407 19 19 0 chr17 31507718 31507770 -63764881 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 1 825 1164 301 150 30 chr17 31507770 31508305 -63764346 + L1MC3 LINE L1 7169 7769 -16 1 825 189 0 0 0 chr17 31508531 31508552 -63764099 + (CAGA)n Simple_repeat Simple_repeat 4 24 0 1 825 245 374 0 0 chr17 31509463 31509554 -63763097 - MIRm SINE MIR -125 151 61 2 825 3722 193 54 9 chr17 31509894 31510804 -63761847 + Lx7 LINE L1 5060 6007 -1689 2 825 297 49 0 0 chr17 31510842 31510883 -63761768 + B2_Mm2 SINE B2 1 41 -154 2 825 1155 43 0 0 chr17 31510883 31511023 -63761628 - B1_Mus2 SINE Alu -7 140 1 2 825 3414 235 67 65 chr17 31511023 31511851 -63760800 + Lx7 LINE L1 6234 7068 -628 2 825 1542 152 107 66 chr17 31511851 31512043 -63760608 + RMER17C LTR ERVK 1 183 -227 2 825 252 0 0 0 chr17 31512043 31512071 -63760580 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 825 1542 152 107 66 chr17 31512071 31512272 -63760379 + RMER17C LTR ERVK 184 410 0 2 825 3414 235 67 65 chr17 31512272 31512452 -63760199 + Lx7 LINE L1 7069 7244 -452 2 825 407 369 53 62 chr17 31512748 31513069 -63759582 - MER44A DNA MER2_type -10 329 12 2 825 665 34 11 0 chr17 31513070 31513158 -63759493 + (GA)n Simple_repeat Simple_repeat 2 90 0 2 825 236 341 0 23 chr17 31513319 31513451 -63759200 + GA-rich Low_complexity Low_complexity 1 129 0 2 825 237 65 0 0 chr17 31514431 31514462 -63758189 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 825 1169 55 0 0 chr17 31514462 31514608 -63758043 - B1_Mus1 SINE Alu -2 146 1 3 825 384 158 59 42 chr17 31514628 31514747 -63757904 - Lx9 LINE L1 -7 7637 7517 3 825 198 0 0 0 chr17 31514749 31514771 -63757880 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 825 23 0 0 0 chr17 31516010 31516033 -63756618 + AT_rich Low_complexity Low_complexity 1 23 0 3 825 348 246 84 145 chr17 31516079 31516245 -63756406 + B4A SINE B4 2 157 -135 3 825 414 0 0 0 chr17 31516313 31516359 -63756292 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 825 495 0 0 0 chr17 31516418 31516473 -63756178 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 825 599 179 0 33 chr17 31516473 31516594 -63756057 - B1_Mur4 SINE Alu -22 128 12 3 825 209 274 0 19 chr17 31516728 31516780 -63755871 + GA-rich Low_complexity Low_complexity 2 52 0 3 825 419 216 4 12 chr17 31517214 31517348 -63755303 - B4 SINE B4 -157 135 4 3 825 1755 201 57 13 chr17 31518254 31518637 -63754014 + MTC LTR MaLR 10 409 -12 4 825 310 270 6 134 chr17 31519058 31519288 -63753363 + MLT2B1 LTR ERVL 152 440 -116 4 825 230 323 42 31 chr17 31519293 31519389 -63753262 + Tigger5 DNA MER2_type 3 99 -2307 4 825 441 108 14 0 chr17 31519614 31519688 -63752963 + B1_Mm SINE Alu 72 146 -1 4 825 1424 188 16 0 chr17 31519715 31519970 -63752681 + ORR1B1 LTR MaLR 96 354 -40 4 825 1140 41 7 0 chr17 31519971 31520117 -63752534 + B1_Mm SINE Alu 1 147 0 4 825 357 86 0 0 chr17 31520117 31520175 -63752476 + (A)n Simple_repeat Simple_repeat 1 58 0 4 825 385 77 0 0 chr17 31520184 31520236 -63752415 + ORR1B1 LTR MaLR 312 363 -4 4 825 494 306 6 34 chr17 31522622 31522801 -63749850 + G-rich Low_complexity Low_complexity 1 174 0 4 825 383 316 11 38 chr17 31522726 31522910 -63749741 + GA-rich Low_complexity Low_complexity 1 179 0 4 825 275 303 0 73 chr17 31522838 31523030 -63749621 + G-rich Low_complexity Low_complexity 1 178 0 4 825 180 111 0 0 chr17 31523036 31523063 -63749588 + (GGGAA)n Simple_repeat Simple_repeat 3 29 0 5 825 216 67 0 0 chr17 31523139 31523169 -63749482 + (CCCCCG)n Simple_repeat Simple_repeat 4 33 0 5 825 21 0 0 0 chr17 31523170 31523191 -63749460 + GC_rich Low_complexity Low_complexity 1 21 0 5 825 351 0 0 0 chr17 31527305 31527344 -63745307 + (TC)n Simple_repeat Simple_repeat 1 39 0 5 825 1425 40 17 0 chr17 31527344 31527521 -63745130 - B2_Mm2 SINE B2 -15 180 1 5 825 2717 56 20 43 chr17 31528023 31528415 -63744236 - L1_Mus1 LINE L1 0 6567 6185 5 825 1065 270 35 70 chr17 31528643 31529069 -63743582 - MTD LTR MaLR 0 419 9 5 825 340 140 0 0 chr17 31529074 31529124 -63743527 + B1_Mur4 SINE Alu 1 50 -100 5 825 605 225 171 17 chr17 31529114 31529290 -63743361 + MTD LTR MaLR 201 403 -16 5 825 387 21 0 0 chr17 31529286 31529334 -63743317 + B1_Mus2 SINE Alu 88 135 -12 5 825 531 0 0 0 chr17 31530782 31530841 -63741810 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 825 207 0 0 0 chr17 31531210 31531233 -63741418 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 825 870 249 145 50 chr17 31531637 31531975 -63740676 - ORR1D2 LTR MaLR 0 370 1 6 825 282 272 54 0 chr17 31532145 31532237 -63740414 - ORR1E LTR MaLR -2 357 261 6 825 420 241 103 22 chr17 31532247 31532383 -63740268 - MLT1B LTR MaLR -77 313 167 6 825 273 324 62 41 chr17 31533565 31533710 -63738941 - ORR1E LTR MaLR -167 192 45 6 825 792 32 0 0 chr17 31534292 31534387 -63738264 + (TTTC)n Simple_repeat Simple_repeat 2 96 0 6 825 609 128 50 33 chr17 31534389 31534510 -63738141 - L1_Mus2 LINE L1 -6 6560 6438 6 825 3097 62 2 5 chr17 31534659 31535067 -63737584 - MTB_Mm LTR MaLR 0 407 1 6 825 229 317 105 53 chr17 31535291 31535481 -63737170 + MLT1A1 LTR MaLR 1 200 -208 6 825 238 275 106 18 chr17 31535890 31535999 -63736652 + MIRm SINE MIR 73 192 -76 6 825 329 318 22 22 chr17 31536666 31536846 -63735805 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 7 825 425 271 40 17 chr17 31536868 31537085 -63735566 + (TGGA)n Simple_repeat Simple_repeat 1 222 0 7 825 299 291 48 12 chr17 31536986 31537153 -63735498 + (TAGA)n Simple_repeat Simple_repeat 3 175 0 7 825 498 70 0 0 chr17 31537283 31537354 -63735297 + (CA)n Simple_repeat Simple_repeat 1 71 0 7 825 207 102 0 71 chr17 31538483 31538525 -63734126 + T-rich Low_complexity Low_complexity 4 42 0 7 825 592 120 70 0 chr17 31538527 31538627 -63734024 - B2_Mm2 SINE B2 -87 108 2 7 825 1044 95 0 0 chr17 31540375 31540522 -63732129 - B1_Mus1 SINE Alu 0 148 2 7 825 260 111 0 43 chr17 31541621 31541668 -63730983 - B2_Mm2 SINE B2 -104 91 47 7 825 1142 114 29 0 chr17 31541755 31541930 -63730721 - B2_Mm2 SINE B2 -14 181 2 7 825 228 42 39 59 chr17 31543038 31543089 -63729562 + (TA)n Simple_repeat Simple_repeat 1 50 0 7 825 509 127 51 0 chr17 31543106 31543224 -63729427 + (CAGAGA)n Simple_repeat Simple_repeat 3 126 0 7 825 470 228 16 47 chr17 31544237 31544366 -63728285 + B1F1 SINE Alu 18 142 -7 8 825 2125 103 3 3 chr17 31544796 31545107 -63727544 - ORR1B2 LTR MaLR 0 367 57 8 825 850 153 174 31 chr17 31545371 31545567 -63727084 + URR1B DNA MER1_type 1 224 -1 8 825 498 108 0 0 chr17 31547309 31547383 -63725268 + (TC)n Simple_repeat Simple_repeat 1 74 0 8 825 184 30 61 0 chr17 31547393 31547426 -63725225 + (CCCCCA)n Simple_repeat Simple_repeat 2 36 0 8 825 211 330 30 30 chr17 31547434 31547534 -63725117 - PB1D9 SINE Alu -19 101 2 8 825 180 0 0 0 chr17 31547768 31547788 -63724863 + (CCCA)n Simple_repeat Simple_repeat 4 23 0 8 825 202 61 0 57 chr17 31549137 31549172 -63723479 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 8 825 208 255 0 21 chr17 31550043 31550091 -63722560 + GA-rich Low_complexity Low_complexity 1 47 0 8 825 24 0 0 0 chr17 31550114 31550138 -63722513 + AT_rich Low_complexity Low_complexity 1 24 0 8 825 326 331 510 5 chr17 31550835 31551027 -63721624 - B4 SINE B4 -2 290 2 9 825 1271 73 5 50 chr17 31551593 31551794 -63720857 + B2_Mm2 SINE B2 1 192 -3 9 825 428 270 16 23 chr17 31552801 31552930 -63719721 + RSINE1 SINE B4 2 129 -36 9 825 468 0 0 0 chr17 31552933 31552985 -63719666 + (CA)n Simple_repeat Simple_repeat 1 52 0 9 825 366 23 0 0 chr17 31553407 31553450 -63719201 + (TG)n Simple_repeat Simple_repeat 1 43 0 9 825 201 318 0 0 chr17 31553457 31553564 -63719087 + (CA)n Simple_repeat Simple_repeat 2 108 0 9 825 246 308 0 0 chr17 31554149 31554279 -63718372 + (CA)n Simple_repeat Simple_repeat 1 130 0 9 825 286 206 14 14 chr17 31557008 31557077 -63715574 + tRNA-Ala-GCA tRNA tRNA 2 70 -5 9 825 270 0 0 0 chr17 31557263 31557293 -63715358 + (GA)n Simple_repeat Simple_repeat 1 30 0 9 825 535 228 16 0 chr17 31557917 31558044 -63714607 - B4 SINE B4 -48 244 116 9 825 246 216 136 59 chr17 31557940 31558058 -63714593 - B1F2 SINE Alu -7 142 16 1 825 725 197 32 13 chr17 31558660 31558814 -63713837 - MTE2b LTR MaLR -3 376 220 1 825 352 100 79 35 chr17 31558855 31558969 -63713682 + (CATATA)n Simple_repeat Simple_repeat 1 119 0 1 825 783 152 0 8 chr17 31559482 31559608 -63713043 + B1_Mur4 SINE Alu 2 126 -24 1 825 468 0 0 0 chr17 31559608 31559660 -63712991 + (CAAAA)n Simple_repeat Simple_repeat 4 55 0 1 825 239 222 19 0 chr17 31560024 31560078 -63712573 + C-rich Low_complexity Low_complexity 4 58 0 1 825 207 69 0 0 chr17 31560636 31560665 -63711986 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 825 353 330 50 33 chr17 31562876 31563058 -63709593 + MIRb SINE MIR 84 268 0 1 825 313 270 95 35 chr17 31564249 31564418 -63708233 - L1M4 LINE L1 -693 5469 5291 1 825 905 256 14 153 chr17 31565305 31565672 -63706979 - RLTR11A LTR ERVK -152 376 67 1 825 1151 55 7 0 chr17 31565672 31565818 -63706833 - B1_Mus2 SINE Alu 0 147 1 1 825 905 256 14 153 chr17 31565818 31565880 -63706771 - RLTR11A LTR ERVK -462 66 7 1 825 465 316 193 42 chr17 31566020 31566430 -63706221 - L1M4 LINE L1 -1512 4634 4163 1 825 817 246 22 0 chr17 31566444 31566623 -63706028 + B3 SINE B2 1 183 -33 1 825 297 232 0 0 chr17 31566664 31566733 -63705918 - B1_Mur3 SINE Alu -17 132 64 1 825 310 236 79 154 chr17 31566893 31567133 -63705518 + RMER10A LTR ERVL 18 239 -203 1 825 201 195 0 0 chr17 31567170 31567211 -63705440 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 825 237 250 0 0 chr17 31567252 31567328 -63705323 + (CA)n Simple_repeat Simple_repeat 1 76 0 1 825 359 309 139 0 chr17 31567371 31567565 -63705086 - RMER12 LTR ERVK -326 996 776 1 825 229 267 141 58 chr17 31567573 31567764 -63704887 - RLTR21 LTR ERVK -321 1251 1045 1 825 213 39 0 0 chr17 31567823 31567849 -63704802 + (TGG)n Simple_repeat Simple_repeat 1 26 0 1 825 248 229 167 12 chr17 31568034 31568118 -63704533 - L1MC2 LINE L1 -9 6335 6239 1 825 227 222 19 0 chr17 31568286 31568340 -63704311 + PB1 SINE Alu 20 74 -53 1 825 773 126 30 30 chr17 31568375 31569382 -63703269 + (TG)n Simple_repeat Simple_repeat 1 1006 0 1 825 233 57 0 28 chr17 31570329 31570365 -63702286 + (ATG)n Simple_repeat Simple_repeat 1 35 0 1 825 301 321 0 35 chr17 31570620 31570733 -63701918 - PB1D10 SINE Alu -2 115 7 1 825 1057 127 0 65 chr17 31572135 31572259 -63700392 + RMER17C LTR ERVK 1 202 -208 1 825 903 88 13 13 chr17 31572259 31572408 -63700243 + (TTCCC)n Simple_repeat Simple_repeat 5 153 0 1 825 1057 152 60 32 chr17 31572408 31572615 -63700036 + RMER17C LTR ERVK 203 401 -9 1 825 1249 99 16 0 chr17 31573543 31573725 -63698926 - B2_Mm2 SINE B2 -9 186 2 1 825 715 231 84 20 chr17 31573727 31573930 -63698721 - B3 SINE B2 0 216 1 1 825 276 20 18 73 chr17 31573993 31574048 -63698603 + (CCCCCA)n Simple_repeat Simple_repeat 3 54 0 1 825 247 295 63 89 chr17 31574133 31574221 -63698430 - L1MD2 LINE L1 -217 6025 5952 1 825 1607 36 0 0 chr17 31574221 31574413 -63698238 - B2_Mm1a SINE B2 0 193 2 1 825 247 312 71 61 chr17 31574413 31574640 -63698011 - L1MD2 LINE L1 -408 5951 5718 1 825 431 118 0 50 chr17 31575089 31575169 -63697482 - B1_Mus2 SINE Alu 0 147 72 1 825 477 110 0 0 chr17 31575171 31575253 -63697398 + (CA)n Simple_repeat Simple_repeat 2 83 0 1 825 243 224 35 0 chr17 31575262 31575320 -63697331 - Lx7 LINE L1 -388 7308 7249 1 825 216 0 0 0 chr17 31575547 31575571 -63697080 + (T)n Simple_repeat Simple_repeat 1 24 0 1 825 746 281 126 40 chr17 31575586 31575983 -63696668 - L1MD2 LINE L1 -1560 4586 4156 1 825 1113 75 0 0 chr17 31575983 31576130 -63696521 - B1_Mus1 SINE Alu 0 148 2 1 825 1153 71 0 17 chr17 31576134 31576306 -63696345 - B2_Mm2 SINE B2 0 195 27 1 825 1428 47 5 16 chr17 31576307 31576501 -63696150 - B2_Mm1a SINE B2 0 193 2 1 825 981 265 45 6 chr17 31576865 31577176 -63695475 - MER54A LTR ERVL -500 401 79 1 825 720 152 316 0 chr17 31577276 31577447 -63695204 - URR1B DNA MER1_type 0 225 1 1 825 1074 92 23 0 chr17 31577532 31577705 -63694946 + (GGAGA)n Simple_repeat Simple_repeat 1 177 0 1 825 415 126 58 0 chr17 31577708 31577795 -63694856 + G-rich Low_complexity Low_complexity 4 95 0 1 825 324 299 56 0 chr17 31577795 31577902 -63694749 + PB1D7 SINE Alu 6 118 -2 1 825 329 196 98 0 chr17 31578375 31578467 -63694184 + L1ME3A LINE L1 5961 6061 -112 1 825 577 259 85 40 chr17 31578698 31578899 -63693752 - B3 SINE B2 -6 210 1 1 825 216 0 0 0 chr17 31578949 31578973 -63693678 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 825 262 228 49 37 chr17 31578973 31579044 -63693607 - PB1D9 SINE Alu -10 110 38 1 825 32 0 0 0 chr17 31579051 31579083 -63693568 + AT_rich Low_complexity Low_complexity 1 32 0 1 825 514 261 9 0 chr17 31579285 31579396 -63693255 + RSINE1 SINE B4 2 113 -52 1 825 222 37 0 0 chr17 31580862 31580889 -63691762 + (TTG)n Simple_repeat Simple_repeat 2 28 0 1 825 233 273 38 25 chr17 31581863 31581942 -63690709 - MLT1C LTR MaLR -78 389 310 1 825 600 14 0 0 chr17 31582853 31582922 -63689729 + (GA)n Simple_repeat Simple_repeat 1 69 0 1 825 681 192 13 33 chr17 31583070 31583221 -63689430 + B3 SINE B2 1 148 -68 1 825 1564 140 55 102 chr17 31583414 31583443 -63689208 - ORR1A2 LTR MaLR 0 327 285 1 825 951 88 73 0 chr17 31583443 31583580 -63689071 - B1_Mus1 SINE Alu 0 148 2 1 825 1564 140 55 102 chr17 31583580 31583893 -63688758 - ORR1A2 LTR MaLR -43 284 1 1 825 214 258 32 16 chr17 31584037 31584100 -63688551 + PB1D10 SINE Alu 18 81 -36 1 825 398 188 110 59 chr17 31585545 31585681 -63686970 - B2_Mm2 SINE B2 0 195 53 1 825 976 239 5 0 chr17 31585689 31585894 -63686757 - B3 SINE B2 -10 206 1 1 825 559 143 72 93 chr17 31586029 31586168 -63686483 - B1_Mur4 SINE Alu 0 150 15 1 825 405 0 0 0 chr17 31586735 31586780 -63685871 + (TTA)n Simple_repeat Simple_repeat 1 45 0 1 825 222 37 0 0 chr17 31586783 31586810 -63685841 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 1 825 1137 72 0 0 chr17 31586811 31586964 -63685687 - B2_Mm2 SINE B2 -41 154 2 1 826 1268 106 11 0 chr17 31589181 31589370 -63683281 + B2_Mm1t SINE B2 2 192 -1 1 826 209 57 0 28 chr17 31589473 31589509 -63683142 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 1 826 304 315 36 36 chr17 31589510 31589622 -63683029 - PB1D7 SINE Alu -7 113 2 1 826 885 173 0 0 chr17 31589654 31589804 -63682847 + B1_Mur4 SINE Alu 1 150 0 1 826 835 222 84 25 chr17 31589811 31590014 -63682637 + ID_B1 SINE B4 8 222 -2 1 826 1572 207 14 83 chr17 31591418 31591848 -63680803 - Lx4B LINE L1 -36 7022 6648 1 826 571 316 73 16 chr17 31592971 31593219 -63679432 + B4A SINE B4 3 264 -28 1 826 189 0 0 0 chr17 31593239 31593260 -63679391 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 826 741 265 135 28 chr17 31594850 31595169 -63677482 - MLT1B LTR MaLR -27 363 11 1 826 234 0 0 0 chr17 31597772 31597798 -63674853 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 826 342 293 50 0 chr17 31598072 31598171 -63674480 + PB1D7 SINE Alu 6 109 -11 1 826 456 318 98 66 chr17 31599228 31599304 -63673347 + MLT1C LTR MaLR 47 114 -353 1 826 2400 74 3 15 chr17 31599304 31599635 -63673016 - ORR1A2 LTR MaLR 0 327 1 1 826 456 318 98 66 chr17 31599635 31599905 -63672746 + MLT1C LTR MaLR 115 404 -63 1 826 345 306 18 26 chr17 31600818 31600932 -63671719 + B4A SINE B4 6 118 -174 1 826 855 152 33 11 chr17 31601371 31601829 -63670822 + (TGGA)n Simple_repeat Simple_repeat 1 468 0 1 826 769 157 44 15 chr17 31601843 31602298 -63670353 + (TGGA)n Simple_repeat Simple_repeat 1 468 0 1 826 254 197 45 8 chr17 31602349 31602482 -63670169 + (TGGA)n Simple_repeat Simple_repeat 3 140 0 1 826 369 261 29 43 chr17 31602599 31602739 -63669912 - MLT1A1 LTR MaLR 0 408 271 1 826 311 272 103 17 chr17 31602829 31602945 -63669706 - MLT1A1 LTR MaLR -282 126 1 1 826 661 219 150 78 chr17 31603846 31604010 -63668641 + B3 SINE B2 4 181 -35 1 826 216 97 0 0 chr17 31604010 31604041 -63668610 + (CATA)n Simple_repeat Simple_repeat 4 34 0 1 826 661 219 150 78 chr17 31604041 31604069 -63668582 + B3 SINE B2 182 209 -7 1 826 442 309 29 29 chr17 31604347 31604520 -63668131 - Tigger7 DNA MER2_type 0 2491 2319 1 826 466 327 138 9 chr17 31604495 31604720 -63667931 - Tigger7 DNA MER2_type -2237 254 1 1 826 258 167 121 0 chr17 31605213 31605279 -63667372 - MER76 LTR ERVL -566 125 52 1 826 300 224 195 57 chr17 31606210 31606333 -63666318 + B1F SINE Alu 1 140 -9 1 826 316 214 77 71 chr17 31607022 31607140 -63665511 + PB1D10 SINE Alu 6 116 -4 1 826 1106 85 12 29 chr17 31608884 31609054 -63663597 + B2_Mm2 SINE B2 2 168 -27 1 826 366 80 0 0 chr17 31610295 31610345 -63662306 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 826 501 17 0 0 chr17 31610345 31610402 -63662249 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 826 1026 115 0 0 chr17 31610425 31610599 -63662052 + (TG)n Simple_repeat Simple_repeat 1 174 0 1 826 709 204 127 16 chr17 31611497 31611686 -63660965 - B3 SINE B2 -6 210 1 1 826 407 19 19 0 chr17 31611864 31611916 -63660735 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 826 568 210 186 0 chr17 31611916 31612040 -63660611 - B3 SINE B2 -68 148 2 1 826 645 96 0 0 chr17 31612050 31612144 -63660507 + (GAAA)n Simple_repeat Simple_repeat 1 94 0 1 826 1225 60 37 21 chr17 31612157 31612174 -63660477 - B2_Mm2 SINE B2 -4 191 175 1 826 1615 21 0 0 chr17 31612174 31612364 -63660287 - B2_Mm1a SINE B2 -2 191 2 1 826 1225 60 37 21 chr17 31612364 31612533 -63660118 - B2_Mm2 SINE B2 -21 174 2 1 826 261 83 0 0 chr17 31612553 31612589 -63660062 + (CATA)n Simple_repeat Simple_repeat 4 39 0 1 826 440 289 148 0 chr17 31612598 31612733 -63659918 - B3A SINE B2 -20 178 24 1 826 1022 52 44 0 chr17 31613327 31613462 -63659189 + B1_Mus1 SINE Alu 2 142 -6 1 826 1049 110 6 0 chr17 31613486 31613649 -63659002 + (GGAGAA)n Simple_repeat Simple_repeat 6 169 0 1 826 487 62 0 0 chr17 31613654 31613719 -63658932 + B1_Mus2 SINE Alu 1 65 -82 1 826 654 49 0 0 chr17 31613719 31613801 -63658850 + (GAAA)n Simple_repeat Simple_repeat 4 85 0 1 826 1194 107 0 0 chr17 31613803 31613980 -63658671 + (GAA)n Simple_repeat Simple_repeat 1 177 0 1 826 297 188 0 0 chr17 31614538 31614618 -63658033 + CT-rich Low_complexity Low_complexity 2 81 0 2 826 252 0 0 0 chr17 31614637 31614665 -63657986 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 826 268 284 0 83 chr17 31614671 31614767 -63657884 - B1F SINE Alu -22 127 40 2 826 1535 41 0 10 chr17 31615374 31615569 -63657082 - B2_Mm2 SINE B2 -2 193 1 2 826 214 268 0 40 chr17 31616434 31616508 -63656143 + C-rich Low_complexity Low_complexity 5 75 0 2 826 390 291 18 0 chr17 31617159 31617269 -63655382 + FordPrefect_a DNA Tip100 370 481 -27 2 826 694 134 79 0 chr17 31617275 31617402 -63655249 + B1_Mus1 SINE Alu 12 148 0 2 826 1270 84 21 5 chr17 31617405 31617596 -63655055 + B2_Mm2 SINE B2 2 195 0 2 826 588 121 0 0 chr17 31617664 31617755 -63654896 + (GGGA)n Simple_repeat Simple_repeat 4 94 0 2 826 189 0 0 0 chr17 31618328 31618349 -63654302 + (CAGA)n Simple_repeat Simple_repeat 3 23 0 2 826 413 277 13 93 chr17 31618429 31618580 -63654071 + ORR1D1 LTR MaLR 236 374 0 2 826 380 0 89 0 chr17 31618670 31618726 -63653925 - B2_Mm1a SINE B2 -6 187 127 2 826 332 161 0 0 chr17 31618774 31618830 -63653821 - tRNA-Val-GTY tRNA tRNA -3 73 18 2 826 414 0 0 0 chr17 31618830 31618876 -63653775 + (CACTA)n Simple_repeat Simple_repeat 1 46 0 2 826 270 309 36 9 chr17 31618895 31619006 -63653645 - L1MD LINE L1 -1359 4787 4674 2 826 750 269 18 36 chr17 31619032 31619058 -63653593 - B3 SINE B2 0 216 194 2 826 2114 138 100 5 chr17 31619058 31619437 -63653214 + MTC LTR MaLR 5 419 -2 2 826 750 269 18 36 chr17 31619437 31619630 -63653021 - B3 SINE B2 -23 193 1 2 826 1060 293 64 22 chr17 31619648 31620007 -63652644 - MTE2b LTR MaLR -5 374 1 2 826 1018 124 10 78 chr17 31620067 31620259 -63652392 + B2_Mm2 SINE B2 6 184 -11 2 826 459 280 47 0 chr17 31620260 31620453 -63652198 - L1MD LINE L1 -1578 4568 4367 2 826 356 115 0 0 chr17 31620456 31620508 -63652143 - RLTR19 LTR ERVK 0 499 448 2 826 2787 87 125 2 chr17 31620507 31620947 -63651704 - RLTR33 LTR ERVK -167 511 18 2 826 1032 95 0 0 chr17 31620954 31621102 -63651549 - B1_Mus1 SINE Alu 0 148 1 2 826 480 273 34 90 chr17 31621102 31621136 -63651515 - B4 SINE B4 -214 78 55 2 826 251 250 105 0 chr17 31621259 31621335 -63651316 - L1MD LINE L1 -1786 4360 4277 2 826 283 190 52 0 chr17 31621433 31621491 -63651160 - MTEb LTR MaLR 0 379 319 2 826 1099 209 58 120 chr17 31621518 31621608 -63651043 + RMER1C Other Other 976 1054 -288 2 826 912 99 14 27 chr17 31621608 31621754 -63650897 + B1_Mur3 SINE Alu 5 148 -1 2 826 1099 209 58 120 chr17 31621754 31622039 -63650612 + RMER1C Other Other 1055 1328 -14 2 826 258 325 51 8 chr17 31622076 31622194 -63650457 - L1M4 LINE L1 -2472 3674 3552 2 826 1478 252 70 34 chr17 31622268 31622766 -63649885 + RMER5 LTR ERV1 11 526 -8 2 826 787 157 152 70 chr17 31622777 31622948 -63649703 - B3 SINE B2 -10 185 1 2 826 727 167 27 20 chr17 31622973 31623120 -63649531 - B1_Mur4 SINE Alu -1 149 2 2 826 556 294 153 27 chr17 31623143 31623693 -63648958 - L1MD LINE L1 -2659 3487 2869 2 826 299 359 105 17 chr17 31624539 31624777 -63647874 - MER31A LTR ERV1 -31 454 196 2 826 364 290 0 21 chr17 31624827 31624922 -63647729 + PB1D10 SINE Alu 2 94 -23 2 826 425 297 18 9 chr17 31624844 31624956 -63647695 + ID_B1 SINE B4 98 210 -14 2 826 275 264 236 0 chr17 31625383 31625561 -63647090 - L1MB4 LINE L1 -20 6163 5944 2 826 242 246 4 37 chr17 31625570 31625664 -63646987 - ORR1E LTR MaLR -14 365 275 2 826 417 277 117 10 chr17 31625882 31626079 -63646572 + Charlie5 DNA MER1_type 2385 2602 -22 2 826 369 178 19 29 chr17 31626348 31626452 -63646199 + CT-rich Low_complexity Low_complexity 1 103 0 2 826 1277 91 32 11 chr17 31626476 31626665 -63645986 - B2_Mm2 SINE B2 -1 194 2 2 826 886 260 10 0 chr17 31626695 31626903 -63645748 - B3 SINE B2 -5 211 2 2 826 288 325 69 66 chr17 31627357 31627599 -63645052 + B4A SINE B4 1 258 -34 2 826 1415 234 113 88 chr17 31627610 31628026 -63644625 - RMER15 LTR ERVL 0 575 128 2 826 718 165 87 0 chr17 31628026 31628153 -63644498 - B1_Mus1 SINE Alu -10 138 1 2 826 1415 234 113 88 chr17 31628153 31628257 -63644394 - RMER15 LTR ERVL -448 127 42 2 826 599 196 6 0 chr17 31628295 31628458 -63644193 + (CA)n Simple_repeat Simple_repeat 1 164 0 2 826 371 21 21 0 chr17 31629108 31629156 -63643495 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 826 976 98 28 0 chr17 31629198 31629341 -63643310 + B1_Mus1 SINE Alu 1 147 -1 2 826 291 337 61 46 chr17 31629567 31629763 -63642888 - LTR41 LTR ERVL -567 201 3 2 826 3111 29 34 0 chr17 31629854 31630237 -63642414 - MTA_Mm LTR MaLR 0 396 1 2 826 368 215 107 45 chr17 31630327 31630439 -63642212 + PB1D9 SINE Alu 1 119 -1 2 826 730 22 0 0 chr17 31630441 31630531 -63642120 + B1_Mm SINE Alu 47 136 -11 2 826 189 107 0 0 chr17 31630548 31630576 -63642075 + (GAAA)n Simple_repeat Simple_repeat 4 31 0 2 826 398 191 406 0 chr17 31631379 31631591 -63641060 + ORR1D1 LTR MaLR 53 352 -22 2 826 373 246 108 17 chr17 31632696 31632816 -63639835 - B4A SINE B4 -14 278 148 2 826 1187 54 0 0 chr17 31633979 31634127 -63638524 - B1_Mus1 SINE Alu 0 148 1 2 826 325 209 15 0 chr17 31634887 31634954 -63637697 + RSINE1 SINE B4 2 69 -96 2 826 303 214 98 33 chr17 31635061 31635153 -63637498 + MTC LTR MaLR 13 110 -311 2 826 246 295 137 16 chr17 31636168 31636292 -63636359 + MLT1F2 LTR MaLR 422 560 0 2 826 1073 173 53 5 chr17 31636340 31636549 -63636102 + URR1B DNA MER1_type 7 225 0 2 826 342 0 0 0 chr17 31637713 31637751 -63634900 + (GGGGA)n Simple_repeat Simple_repeat 3 40 0 2 826 882 171 6 17 chr17 31638727 31638900 -63633751 - B2_Mm2 SINE B2 -24 171 1 2 826 612 169 131 0 chr17 31641072 31641202 -63631449 + B1_Mus2 SINE Alu 1 147 0 2 826 540 134 217 8 chr17 31643021 31643141 -63629510 + B1_Mus2 SINE Alu 1 145 -2 2 826 384 354 8 0 chr17 31643141 31643263 -63629388 + GA-rich Low_complexity Low_complexity 9 131 0 2 826 472 209 169 7 chr17 31643893 31644047 -63628604 + B3A SINE B2 1 179 -19 2 826 226 322 101 78 chr17 31644615 31644834 -63627817 - B4 SINE B4 -2 290 67 2 826 318 336 74 0 chr17 31644839 31644961 -63627690 + RSINE1 SINE B4 34 164 -1 2 826 418 318 108 63 chr17 31645345 31645442 -63627209 + ORR1E LTR MaLR 11 111 -248 2 826 1125 68 0 0 chr17 31645442 31645589 -63627062 + B1_Mus2 SINE Alu 1 147 0 2 826 297 0 0 0 chr17 31645597 31645630 -63627021 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 826 418 318 108 63 chr17 31645630 31645855 -63626796 + ORR1E LTR MaLR 123 355 -4 2 826 676 220 21 7 chr17 31647812 31647954 -63624697 - B1_Mus1 SINE Alu 0 148 5 2 826 666 211 12 60 chr17 31647997 31648163 -63624488 - B2_Mm2 SINE B2 -8 187 30 2 826 874 132 35 7 chr17 31649934 31650079 -63622572 + B1_Mur4 SINE Alu 1 149 -1 2 826 345 310 10 111 chr17 31650430 31650637 -63622014 - MLT1H-int LTR MaLR -468 941 756 2 826 21 0 0 0 chr17 31650654 31650675 -63621976 + AT_rich Low_complexity Low_complexity 1 21 0 2 826 477 296 111 0 chr17 31650695 31650830 -63621821 + Lx8 LINE L1 7181 7330 -143 2 826 270 160 0 0 chr17 31650830 31650880 -63621771 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 826 22 0 0 0 chr17 31650975 31650997 -63621654 + AT_rich Low_complexity Low_complexity 1 22 0 2 826 514 204 0 10 chr17 31650997 31651096 -63621555 + B1_Mur1 SINE Alu 47 144 -5 2 826 275 250 12 0 chr17 31651097 31651181 -63621470 + GA-rich Low_complexity Low_complexity 3 87 0 2 826 469 257 127 55 chr17 31651199 31651359 -63621292 + B3A SINE B2 5 177 -21 2 826 324 0 0 0 chr17 31651359 31651395 -63621256 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 826 469 266 91 91 chr17 31651395 31651438 -63621213 + B3A SINE B2 166 198 0 2 826 426 175 41 73 chr17 31651440 31651563 -63621088 + PB1D9 SINE Alu 1 119 -1 2 826 224 316 0 0 chr17 31651725 31651782 -63620869 + C-rich Low_complexity Low_complexity 3 59 0 2 826 500 320 120 29 chr17 31651804 31652178 -63620473 - L1M5 LINE L1 -1485 4661 4254 2 826 1008 103 7 0 chr17 31652530 31652676 -63619975 - B1_Mus1 SINE Alu 0 148 2 2 826 1112 85 73 0 chr17 31652731 31652895 -63619756 + B2_Mm2 SINE B2 8 183 -12 2 826 180 0 0 0 chr17 31652983 31653003 -63619648 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2 826 941 242 9 5 chr17 31653032 31653244 -63619407 + B3 SINE B2 3 215 -1 2 826 508 208 37 9 chr17 31653256 31653363 -63619288 + PB1D9 SINE Alu 4 113 -7 2 826 744 179 35 28 chr17 31653365 31653509 -63619142 + B1_Mur4 SINE Alu 1 145 -5 2 826 1398 242 82 78 chr17 31653516 31653775 -63618876 - RMER5 LTR ERV1 -8 526 257 2 826 324 0 0 0 chr17 31653775 31653811 -63618840 + (GTTTG)n Simple_repeat Simple_repeat 4 39 0 2 826 1016 103 0 0 chr17 31653812 31653948 -63618703 - B1_Mus1 SINE Alu -8 140 5 2 826 1398 242 82 78 chr17 31653948 31654184 -63618467 - RMER5 LTR ERV1 -278 256 27 2 826 295 283 72 98 chr17 31654216 31654369 -63618282 - RMER15 LTR ERVL -91 484 336 2 826 235 333 24 54 chr17 31654427 31654595 -63618056 - Lx8 LINE L1 -300 7173 7011 2 826 738 159 21 14 chr17 31654735 31654875 -63617776 + B1_Mur4 SINE Alu 2 142 -8 2 826 926 51 7 21 chr17 31654876 31655016 -63617635 + (GAGAA)n Simple_repeat Simple_repeat 5 142 0 2 826 1132 81 69 0 chr17 31655030 31655203 -63617448 + B2_Mm2 SINE B2 10 194 -1 2 826 273 217 0 30 chr17 31655218 31655294 -63617357 + PB1D10 SINE Alu 41 109 -11 2 826 270 0 0 0 chr17 31655294 31655324 -63617327 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2 826 354 156 0 0 chr17 31656306 31656370 -63616281 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 826 1072 127 12 0 chr17 31656422 31656588 -63616063 - B2_Mm2 SINE B2 -27 168 1 3 826 235 324 93 0 chr17 31656657 31656765 -63615886 - ID_B1 SINE B4 -101 123 6 3 826 230 209 65 0 chr17 31657417 31657483 -63615168 - BC1_Mm scRNA scRNA -9 74 5 3 826 317 106 0 15 chr17 31659268 31659335 -63613316 - B2_Mm2 SINE B2 0 195 130 3 826 814 104 7 15 chr17 31659329 31659466 -63613185 + B2_Mm2 SINE B2 60 195 0 3 826 25 0 0 0 chr17 31659539 31659564 -63613087 + AT_rich Low_complexity Low_complexity 1 25 0 3 826 1164 48 0 0 chr17 31659578 31659723 -63612928 - B1_Mus2 SINE Alu 0 147 3 3 826 1337 75 37 5 chr17 31659726 31659914 -63612737 - B2_Mm2 SINE B2 0 195 2 3 826 267 31 0 0 chr17 31660673 31660705 -63611946 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 3 826 342 0 0 0 chr17 31660934 31660972 -63611679 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 826 1161 21 14 0 chr17 31661206 31661349 -63611302 + B1_Mm SINE Alu 1 145 -2 3 826 207 0 0 0 chr17 31661349 31661372 -63611279 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 3 826 207 0 0 0 chr17 31661489 31661512 -63611139 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3 826 505 268 165 0 chr17 31661521 31661685 -63610966 - B3A SINE B2 -6 192 2 3 826 269 268 13 90 chr17 31662310 31662388 -63610263 - ID4_ SINE ID -10 73 2 3 826 1362 84 11 0 chr17 31662552 31662743 -63609908 - B2_Mm1t SINE B2 0 193 1 3 826 728 283 9 31 chr17 31662762 31662988 -63609663 - ID_B1 SINE B4 -2 222 2 3 826 563 100 10 0 chr17 31663066 31663162 -63609489 + B2_Mm2 SINE B2 1 101 -97 3 826 1219 20 0 0 chr17 31663302 31663449 -63609202 + B1_Mus2 SINE Alu 1 147 0 3 826 480 282 14 0 chr17 31665449 31665591 -63607060 - ID_B1 SINE B4 0 224 81 3 826 1060 114 97 0 chr17 31665837 31666013 -63606638 + B2_Mm2 SINE B2 3 195 0 3 826 1123 82 0 0 chr17 31666196 31666343 -63606308 + B1_Mus1 SINE Alu 2 148 0 3 826 226 293 67 0 chr17 31666728 31666803 -63605848 + ID4_ SINE ID 2 81 -2 3 826 318 123 0 0 chr17 31667043 31667100 -63605551 + (TTCC)n Simple_repeat Simple_repeat 3 59 0 3 826 2506 116 78 56 chr17 31668677 31669124 -63603527 + RMER6B LTR ERVK 3 459 -2 3 826 2317 82 121 20 chr17 31669162 31669528 -63603123 - RLTR47_MM LTR ERV1 -1 531 121 3 826 1703 26 0 0 chr17 31669528 31669720 -63602931 + B2_Mm1t SINE B2 2 193 0 3 826 2317 82 121 20 chr17 31669720 31669749 -63602902 - RLTR47_MM LTR ERV1 -412 120 96 3 826 395 207 160 103 chr17 31670291 31670302 -63602349 + B4 SINE B4 76 134 -158 3 826 908 38 17 0 chr17 31670302 31670431 -63602220 + B1_Mm SINE Alu 1 148 0 3 826 395 207 160 103 chr17 31670431 31670447 -63602204 + B4 SINE B4 135 240 -52 3 826 555 293 33 13 chr17 31670701 31670853 -63601798 + RSINE1 SINE B4 11 165 0 3 826 324 0 0 0 chr17 31670939 31670975 -63601676 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 826 2549 67 94 16 chr17 31671192 31671376 -63601275 - RLTR9F LTR ERVK -4 411 211 3 826 4309 44 2 2 chr17 31671376 31671879 -63600772 + RLTR1C LTR ERV1 1 503 0 3 826 2549 67 94 16 chr17 31671879 31672075 -63600576 - RLTR9F LTR ERVK -205 210 1 3 826 534 294 28 0 chr17 31672722 31672865 -63599786 + MLT1A0 LTR MaLR 215 361 -4 3 826 302 257 148 28 chr17 31673238 31673346 -63599305 - HAL1-3A_ME LINE L1 -72 2786 2666 3 826 321 282 96 27 chr17 31673316 31673462 -63599189 - HAL1-3A_ME LINE L1 -420 2438 2283 3 826 262 125 35 18 chr17 31673462 31673519 -63599132 + C-rich Low_complexity Low_complexity 2 59 0 3 826 298 313 0 0 chr17 31673603 31673686 -63598965 - Lx8 LINE L1 -1571 5902 5820 3 826 306 148 0 0 chr17 31673776 31673830 -63598821 + (T)n Simple_repeat Simple_repeat 1 54 0 3 826 1302 27 0 0 chr17 31673830 31673977 -63598674 - B1_Mus2 SINE Alu 0 147 1 3 826 486 49 0 0 chr17 31674703 31674764 -63597887 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 826 599 227 7 0 chr17 31674772 31674926 -63597725 + (TATATG)n Simple_repeat Simple_repeat 4 158 0 3 826 252 184 0 0 chr17 31674928 31674977 -63597674 + (CATA)n Simple_repeat Simple_repeat 3 51 0 3 826 298 348 67 24 chr17 31675326 31675491 -63597160 + RMER15 LTR ERVL 336 507 -68 3 826 502 233 8 17 chr17 31675676 31675794 -63596857 + PB1D10 SINE Alu 1 117 0 3 826 203 171 0 0 chr17 31675794 31675835 -63596816 + A-rich Low_complexity Low_complexity 1 41 0 3 826 314 210 0 147 chr17 31675835 31675851 -63596800 + MT2B LTR ERVL 155 156 -445 3 826 643 155 6 178 chr17 31675851 31676008 -63596643 + B1_Mur1 SINE Alu 3 132 -17 3 826 1455 259 42 69 chr17 31676171 31676383 -63596268 + RLTR18B LTR ERVK 4 211 -301 3 826 180 0 0 0 chr17 31676383 31676403 -63596248 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 3 826 1455 259 42 69 chr17 31676403 31676580 -63596071 + RLTR18B LTR ERVK 212 381 -131 3 826 1121 52 15 0 chr17 31676580 31676715 -63595936 + B1_Mur4 SINE Alu 1 137 -13 3 826 222 37 0 0 chr17 31676718 31676745 -63595906 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 826 1455 259 42 69 chr17 31676745 31676798 -63595853 + RLTR18B LTR ERVK 382 438 -74 3 826 227 231 79 124 chr17 31677200 31677289 -63595362 - PB1D10 SINE Alu -28 89 5 3 826 222 268 236 48 chr17 31677289 31677310 -63595341 - ID_B1 SINE B4 -25 199 66 3 826 516 32 0 0 chr17 31677310 31677372 -63595279 + (TG)n Simple_repeat Simple_repeat 2 63 0 3 826 222 268 236 48 chr17 31677372 31677426 -63595225 - ID SINE ID -159 65 4 3 826 1128 53 0 0 chr17 31677663 31677796 -63594855 + B1_Mm SINE Alu 2 134 -13 3 826 212 122 0 24 chr17 31677824 31677866 -63594785 + (GGAA)n Simple_repeat Simple_repeat 1 41 0 3 826 784 216 0 0 chr17 31678843 31678982 -63593669 - B1_Mur1 SINE Alu -4 145 7 3 826 305 293 25 81 chr17 31678982 31678996 -63593655 + YREP_Mm Unknown Unknown 216 324 -1488 3 826 382 234 0 49 chr17 31679021 31679102 -63593549 - B3A SINE B2 -53 145 69 3 826 359 315 27 0 chr17 31679227 31679338 -63593313 - MER92C LTR ERV1 -151 403 290 3 826 264 320 13 0 chr17 31679359 31679434 -63593217 - PB1 SINE Alu -41 86 11 3 826 669 205 0 0 chr17 31679558 31679762 -63592889 + (TA)n Simple_repeat Simple_repeat 1 204 0 3 826 1972 86 79 0 chr17 31679762 31680040 -63592611 - ORR1A2 LTR MaLR 0 327 28 3 826 324 0 0 0 chr17 31680047 31680083 -63592568 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 826 1018 202 48 19 chr17 31681278 31681485 -63591166 + B3 SINE B2 1 213 -3 3 826 976 50 0 0 chr17 31681488 31681609 -63591042 - B1_Mm SINE Alu 0 147 27 3 826 317 93 0 18 chr17 31681643 31681698 -63590953 + (CAAA)n Simple_repeat Simple_repeat 3 56 0 3 826 1144 125 17 27 chr17 31682298 31682517 -63590134 - B2_Mm2 SINE B2 0 216 2 3 826 1237 139 15 10 chr17 31682542 31682744 -63589907 + URR1B DNA MER1_type 1 203 -22 3 826 2213 72 3 117 chr17 31682744 31683030 -63589621 + ORR1A2 LTR MaLR 1 286 -41 3 826 1212 34 7 20 chr17 31683030 31683180 -63589471 + B1_Mus1 SINE Alu 1 148 0 3 826 2213 72 3 117 chr17 31683180 31683207 -63589444 + ORR1A2 LTR MaLR 287 287 -40 3 826 1399 73 15 25 chr17 31683207 31683404 -63589247 + B2_Mm2 SINE B2 1 195 0 3 826 2213 72 3 117 chr17 31683404 31683449 -63589202 + ORR1A2 LTR MaLR 287 319 -8 3 826 442 228 52 9 chr17 31683529 31683644 -63589007 - PB1D7 SINE Alu 0 120 1 3 826 693 158 111 15 chr17 31683965 31684100 -63588551 + B1_Mur2 SINE Alu 1 148 -1 3 826 378 0 0 0 chr17 31685561 31685603 -63587048 + (TCTA)n Simple_repeat Simple_repeat 3 44 0 3 826 363 155 41 0 chr17 31685616 31685713 -63586938 + (CATA)n Simple_repeat Simple_repeat 2 102 0 3 826 1919 128 26 42 chr17 31685778 31686088 -63586563 + ORR1A3 LTR MaLR 19 323 -3 3 826 231 279 13 0 chr17 31686103 31686182 -63586469 + (TCCA)n Simple_repeat Simple_repeat 4 83 0 3 826 1107 84 114 0 chr17 31686195 31686362 -63586289 - B2_Mm2 SINE B2 -8 187 2 3 826 665 252 124 63 chr17 31686415 31686769 -63585882 - LTR48 LTR ERV1 -16 771 403 3 826 1116 204 43 68 chr17 31686838 31687212 -63585439 - RMER16 LTR ERVK 0 533 1 3 826 330 285 105 23 chr17 31687534 31687717 -63584934 - MLT2D LTR ERVL -145 269 71 3 826 361 366 0 7 chr17 31687870 31688005 -63584646 + CT-rich Low_complexity Low_complexity 3 136 0 3 826 305 247 0 61 chr17 31688080 31688160 -63584491 + Charlie1a DNA MER1_type 465 539 -916 3 826 957 244 43 76 chr17 31688160 31688346 -63584305 + B4A SINE B4 1 184 -108 3 826 2295 188 89 73 chr17 31688346 31688686 -63583965 - RLTR31A_Mm LTR ERVK 0 584 209 3 826 1148 89 0 7 chr17 31688686 31688833 -63583818 + B1_Mus1 SINE Alu 2 147 -1 3 826 2295 188 89 73 chr17 31688833 31689067 -63583584 - RLTR31A_Mm LTR ERVK -376 208 1 3 826 957 244 43 76 chr17 31689067 31689182 -63583469 + B4A SINE B4 185 291 -1 3 826 654 58 15 3 chr17 31689353 31689443 -63583208 + IAPLTR1a_Mm LTR ERVK 1 132 -253 3 826 1082 161 10 25 chr17 31689420 31689618 -63583033 + IAPLTR2_Mm LTR ERVK 281 475 0 3 826 959 109 14 160 chr17 31689619 31689838 -63582813 + IAPEz-int LTR ERVK 9 195 -6286 3 826 226 273 0 0 chr17 31689847 31689891 -63582760 + RLTR27 LTR ERVK 232 275 -34 3 826 3459 60 1 16 chr17 31689892 31690469 -63582182 + IAPEz-int LTR ERVK 169 662 -5819 3 826 902 84 0 0 chr17 31690469 31690588 -63582063 + IAPEz-int LTR ERVK 1359 1477 -5004 3 826 2380 112 64 12 chr17 31690588 31691021 -63581630 + IAPLTR2_Mm LTR ERVK 12 475 0 3 826 611 267 36 83 chr17 31691021 31691210 -63581441 - B4A SINE B4 -85 207 28 3 826 394 259 8 100 chr17 31691262 31691382 -63581269 + PB1 SINE Alu 3 111 -16 3 826 885 335 95 49 chr17 31691395 31691502 -63581149 + Charlie1a DNA MER1_type 617 726 -729 3 826 2209 114 6 50 chr17 31691502 31691791 -63580860 + ORR1A2 LTR MaLR 1 283 -44 3 826 1248 48 0 0 chr17 31691791 31691937 -63580714 + B1_Mm SINE Alu 2 147 0 3 826 2209 114 6 50 chr17 31691937 31691989 -63580662 + ORR1A2 LTR MaLR 284 327 0 3 826 885 335 95 49 chr17 31691989 31692575 -63580076 + Charlie1a DNA MER1_type 727 1342 -113 3 826 573 216 0 0 chr17 31692895 31693210 -63579441 + GA-rich Low_complexity Low_complexity 1 315 0 3 826 375 41 0 0 chr17 31693253 31693302 -63579349 + (GA)n Simple_repeat Simple_repeat 1 49 0 3 826 329 282 0 26 chr17 31693306 31693419 -63579232 + L1MB2 LINE L1 5504 5613 -570 3 826 226 322 29 129 chr17 31693422 31693561 -63579090 + B1_Mur3 SINE Alu 1 125 -24 3 826 459 0 0 0 chr17 31693700 31693751 -63578900 + (TCTA)n Simple_repeat Simple_repeat 1 51 0 3 826 386 312 11 11 chr17 31693769 31693944 -63578707 + L1MB2 LINE L1 5687 5861 -310 3 826 429 261 17 9 chr17 31694162 31694278 -63578373 + PB1D7 SINE Alu 3 119 -1 4 826 341 267 91 8 chr17 31695063 31695184 -63577467 - ORR1E LTR MaLR -228 131 1 4 826 448 321 144 80 chr17 31695654 31696016 -63576635 - MER21B LTR ERV1 -168 695 311 4 826 3827 142 77 17 chr17 31696024 31696676 -63575975 - RLTR17 LTR ERVK -1 691 1 4 826 323 227 0 0 chr17 31696677 31696743 -63575908 - ORR1D2 LTR MaLR -4 366 301 4 826 1275 208 83 30 chr17 31696724 31696747 -63575904 - RMER16 LTR ERVK -178 355 331 4 826 1222 42 0 7 chr17 31696747 31696892 -63575759 + B1_Mus1 SINE Alu 5 148 0 4 826 1275 208 83 30 chr17 31696892 31697205 -63575446 - RMER16 LTR ERVK -203 330 1 4 826 709 243 133 49 chr17 31697470 31697695 -63574956 + B4A SINE B4 49 292 0 4 826 310 237 12 216 chr17 31697816 31697983 -63574668 - ID_B1 SINE B4 0 224 92 4 826 234 288 0 119 chr17 31698028 31698093 -63574558 - PB1 SINE Alu -19 108 56 4 826 834 60 248 0 chr17 31698093 31698210 -63574441 - B1_Mm SINE Alu 0 147 2 4 826 234 288 0 119 chr17 31698210 31698262 -63574389 - PB1 SINE Alu -72 55 5 4 826 1138 95 0 0 chr17 31698826 31698973 -63573678 - B1_Mus1 SINE Alu 0 148 2 4 826 1153 127 21 21 chr17 31699075 31699268 -63573383 - B2_Mm2 SINE B2 0 195 3 4 826 710 256 36 5 chr17 31699279 31699471 -63573180 - B3A SINE B2 0 198 1 4 826 1462 53 5 26 chr17 31699513 31699707 -63572944 + B2_Mm2 SINE B2 1 190 -5 4 826 631 215 269 0 chr17 31699851 31700070 -63572581 + MTD LTR MaLR 142 419 0 4 826 1303 27 0 0 chr17 31700118 31700265 -63572386 - B1_Mm SINE Alu 0 147 1 4 826 819 271 4 52 chr17 31700287 31700520 -63572131 - ID_B1 SINE B4 -2 222 1 4 826 366 80 0 0 chr17 31701024 31701074 -63571577 + (T)n Simple_repeat Simple_repeat 1 50 0 4 826 185 122 0 58 chr17 31701571 31701623 -63571028 + C-rich Low_complexity Low_complexity 4 52 0 4 826 29 47 0 0 chr17 31701634 31701677 -63570974 + GC_rich Low_complexity Low_complexity 1 43 0 4 826 257 230 0 10 chr17 31701854 31701955 -63570696 + (CCG)n Simple_repeat Simple_repeat 3 102 0 4 826 198 0 0 0 chr17 31702010 31702032 -63570619 + (CGGGGG)n Simple_repeat Simple_repeat 3 24 0 4 826 26 0 0 0 chr17 31702065 31702091 -63570560 + GC_rich Low_complexity Low_complexity 1 26 0 4 826 206 200 46 28 chr17 31702201 31702309 -63570342 + (CGG)n Simple_repeat Simple_repeat 3 112 0 4 826 21 0 0 0 chr17 31702661 31702682 -63569969 + AT_rich Low_complexity Low_complexity 1 21 0 4 826 21 0 0 0 chr17 31703062 31703083 -63569568 + GC_rich Low_complexity Low_complexity 1 21 0 4 826 627 172 132 8 chr17 31703369 31703498 -63569153 + B1_Mur4 SINE Alu 1 145 -5 4 826 712 271 86 78 chr17 31704839 31705558 -63567093 - L1MB3 LINE L1 -204 5979 5264 4 826 631 207 58 32 chr17 31705621 31705776 -63566875 + RSINE1 SINE B4 3 161 -4 4 826 220 338 51 13 chr17 31706104 31706131 -63566520 - BC1_Mm scRNA scRNA -53 99 19 4 826 306 196 78 0 chr17 31706131 31706182 -63566469 - tRNA-Ala-GCY_ tRNA tRNA -8 67 13 4 826 484 250 53 46 chr17 31706387 31706538 -63566113 + B4A SINE B4 24 175 -117 4 826 254 231 139 61 chr17 31706668 31706783 -63565868 - PB1 SINE Alu -2 125 2 4 826 1285 99 15 35 chr17 31706998 31707197 -63565454 - B2_Mm2 SINE B2 0 195 1 4 826 1215 55 0 0 chr17 31707358 31707504 -63565147 + B1_Mm SINE Alu 2 147 0 4 826 229 126 0 49 chr17 31707802 31707849 -63564802 + B1_Mus2 SINE Alu 89 132 -15 4 826 694 247 9 33 chr17 31708060 31708236 -63564415 - B3 SINE B2 -13 203 30 4 826 343 275 44 44 chr17 31708218 31708332 -63564319 - PB1 SINE Alu -7 120 7 4 826 500 125 21 54 chr17 31708514 31708607 -63564044 - B1_Mur3 SINE Alu -6 143 54 4 826 327 102 360 30 chr17 31708624 31708724 -63563927 - B2_Mm2 SINE B2 -14 181 49 4 826 419 150 17 0 chr17 31708773 31708856 -63563795 - B2_Mm1t SINE B2 -14 179 93 4 826 369 188 43 0 chr17 31708909 31708978 -63563673 - B3A SINE B2 -85 113 42 4 826 1063 102 108 6 chr17 31708989 31709156 -63563495 - B2_Mm2 SINE B2 -11 184 1 4 826 1119 82 0 33 chr17 31709166 31709318 -63563333 - B1_Mus1 SINE Alu 0 148 2 4 826 215 277 0 0 chr17 31709723 31709770 -63562881 + polypurine Low_complexity Low_complexity 2 48 0 4 826 319 284 0 0 chr17 31709866 31709933 -63562718 - MER20 DNA MER1_type -152 67 1 4 826 1194 69 0 0 chr17 31710012 31710157 -63562494 + B1_Mus2 SINE Alu 1 145 -2 4 826 1397 92 0 5 chr17 31710238 31710424 -63562227 + B2_Mm2 SINE B2 3 187 -8 4 826 281 269 68 0 chr17 31710458 31710534 -63562117 + PB1D10 SINE Alu 29 126 -1 4 826 249 327 106 0 chr17 31710562 31710666 -63561985 + PB1D10 SINE Alu 3 117 0 4 826 664 213 52 0 chr17 31710822 31710958 -63561693 + B1_Mur1 SINE Alu 7 149 0 4 826 1147 211 20 0 chr17 31711255 31711459 -63561192 + B3 SINE B2 1 208 -8 4 826 210 283 50 80 chr17 31711647 31711747 -63560904 - L2a LINE L2 -6 3420 3324 4 826 277 304 58 50 chr17 31712146 31712267 -63560384 - ORR1B1-int LTR MaLR -307 1273 1152 4 826 4182 149 99 65 chr17 31712278 31713140 -63559511 - RMER19B LTR ERVK -11 891 1 4 826 942 341 126 47 chr17 31713201 31714143 -63558508 - ORR1B1-int LTR MaLR -455 1125 1 4 826 329 318 113 70 chr17 31714145 31714429 -63558222 - ORR1B1 LTR MaLR -8 386 91 4 826 248 260 0 105 chr17 31714427 31714465 -63558186 - MLT1A1 LTR MaLR -33 375 344 4 826 724 189 27 34 chr17 31714465 31714613 -63558038 + B1_Mur4 SINE Alu 3 149 -1 4 826 248 260 0 105 chr17 31714613 31714660 -63557991 - MLT1A1 LTR MaLR -65 343 299 4 826 489 186 59 50 chr17 31714654 31714773 -63557878 + B1_Mm SINE Alu 7 126 -21 4 826 309 238 25 12 chr17 31714920 31715001 -63557650 - MER31B LTR ERV1 -5 480 399 4 826 361 394 6 64 chr17 31715122 31715293 -63557358 + MTE-int LTR MaLR 136 296 -1284 4 826 370 292 154 29 chr17 31715290 31715530 -63557121 - MER31B LTR ERV1 -175 291 22 4 826 207 0 0 0 chr17 31715915 31715938 -63556713 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 4 826 1053 91 0 7 chr17 31715955 31716099 -63556552 - B1_Mus1 SINE Alu 0 148 6 4 826 495 221 67 9 chr17 31717191 31717296 -63555355 + B1_Mur1 SINE Alu 2 112 -37 4 826 232 291 128 101 chr17 31717721 31717778 -63554873 + MT2B LTR ERVL 88 240 -361 4 826 258 282 54 76 chr17 31717778 31717870 -63554781 + B4A SINE B4 85 174 -118 4 826 545 215 0 36 chr17 31717794 31717905 -63554746 + PB1D9 SINE Alu 14 120 0 4 826 391 311 117 40 chr17 31718434 31718786 -63553865 - MLT1C LTR MaLR -96 409 20 4 827 769 164 19 52 chr17 31721027 31721181 -63551470 + B1_Mur4 SINE Alu 2 150 0 4 827 1202 51 0 0 chr17 31721225 31721363 -63551288 + B1_Mus2 SINE Alu 1 138 -9 4 827 276 30 0 0 chr17 31721363 31721396 -63551255 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 4 827 398 227 115 34 chr17 31721556 31721678 -63550973 - PB1D10 SINE Alu -18 131 1 4 827 586 277 13 13 chr17 31721714 31721864 -63550787 - RSINE1 SINE B4 -14 151 2 4 827 296 200 140 100 chr17 31721868 31721968 -63550683 - PB1D7 SINE Alu -3 117 14 4 827 1331 71 0 56 chr17 31722013 31722208 -63550443 + B2_Mm2 SINE B2 4 187 -8 4 827 389 174 58 0 chr17 31722239 31722308 -63550343 + B3A SINE B2 41 113 -85 4 827 180 0 0 0 chr17 31722323 31722343 -63550308 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 4 827 198 91 0 0 chr17 31722471 31722504 -63550147 + (T)n Simple_repeat Simple_repeat 1 33 0 4 827 1142 36 0 0 chr17 31722515 31722652 -63549999 - B1_Mm SINE Alu -10 137 1 4 827 385 205 99 30 chr17 31723150 31723281 -63549370 - ID_B1 SINE B4 -1 223 84 4 827 198 0 0 0 chr17 31723294 31723316 -63549335 + (T)n Simple_repeat Simple_repeat 1 22 0 4 827 785 45 26 35 chr17 31723680 31723796 -63548855 - B1_Mus2 SINE Alu 0 147 33 4 827 269 184 73 73 chr17 31723727 31723809 -63548842 - RLTR25B LTR ERVK -519 509 428 4 827 665 169 246 17 chr17 31723822 31723997 -63548654 - B3 SINE B2 -1 215 1 4 827 739 218 7 0 chr17 31724078 31724225 -63548426 - B1_Mur1 SINE Alu -1 148 1 4 827 461 251 81 48 chr17 31724231 31724440 -63548211 - B3 SINE B2 0 216 1 4 827 458 245 19 9 chr17 31724817 31724924 -63547727 + B3A SINE B2 1 108 -90 4 827 426 69 0 0 chr17 31724929 31724987 -63547664 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 827 210 195 0 47 chr17 31725714 31725757 -63546894 + B4 SINE B4 93 133 -159 4 827 236 167 0 0 chr17 31725755 31725791 -63546860 + B1F SINE Alu 97 132 -17 4 827 289 293 79 31 chr17 31725809 31725936 -63546715 + RSINE1 SINE B4 11 143 -22 4 827 304 260 66 45 chr17 31725946 31726164 -63546487 - L1MB2 LINE L1 -209 5962 5738 4 827 583 160 19 9 chr17 31726179 31726286 -63546365 - B1_Mur2 SINE Alu -7 142 35 4 827 289 301 21 21 chr17 31726737 31726832 -63545819 + PB1D10 SINE Alu 3 97 -20 4 827 759 88 168 0 chr17 31726890 31727015 -63545636 + B1_Mus2 SINE Alu 2 147 0 4 827 287 250 514 9 chr17 31727157 31727268 -63545383 + B3 SINE B2 2 168 -48 4 827 360 0 0 0 chr17 31727269 31727309 -63545342 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 827 230 291 11 102 chr17 31727365 31727453 -63545198 + MT2B2 LTR ERVL 168 247 -337 4 827 268 273 44 22 chr17 31727378 31727468 -63545183 + PB1D10 SINE Alu 17 108 -9 4 827 283 283 22 0 chr17 31728649 31728741 -63543910 + L1MD LINE L1 5055 5148 -998 4 827 462 265 110 11 chr17 31729382 31729573 -63543078 - L1MB3 LINE L1 -73 6110 5901 5 827 305 267 104 67 chr17 31729612 31729805 -63542846 - L1MD LINE L1 -886 5473 5274 5 827 432 321 113 45 chr17 31729800 31730002 -63542649 - L1MD LINE L1 -1197 4949 4732 5 827 794 76 17 8 chr17 31730002 31730121 -63542530 - PB1D9 SINE Alu 0 120 1 5 827 432 321 113 45 chr17 31730121 31730414 -63542237 - L1MD LINE L1 -1415 4731 4412 5 827 649 237 0 35 chr17 31730414 31730558 -63542093 + B1_Mur2 SINE Alu 1 139 -10 5 827 432 321 113 45 chr17 31730558 31730599 -63542052 - L1MD LINE L1 -1735 4411 4376 5 827 250 272 191 48 chr17 31730600 31730789 -63541862 - B3 SINE B2 0 216 1 5 827 1217 41 0 0 chr17 31730862 31731009 -63541642 - B1_Mm SINE Alu 0 147 1 5 827 788 142 0 29 chr17 31731012 31731150 -63541501 - B1_Mur4 SINE Alu 0 150 17 5 827 246 271 43 141 chr17 31731080 31731157 -63541494 - MT2B2 LTR ERVL -344 240 174 5 827 1304 52 12 0 chr17 31731157 31731329 -63541322 + (TTTC)n Simple_repeat Simple_repeat 3 176 0 5 827 246 271 43 141 chr17 31731329 31731414 -63541237 - MT2B2 LTR ERVL -411 173 94 5 827 383 298 56 7 chr17 31731658 31731800 -63540851 - L1MD LINE L1 -1928 4218 4070 5 827 682 253 40 45 chr17 31732540 31732739 -63539912 + B3A SINE B2 1 198 0 5 827 659 284 13 6 chr17 31732845 31733001 -63539650 - RSINE1 SINE B4 0 165 9 5 827 265 202 46 35 chr17 31733320 31733407 -63539244 + PB1D9 SINE Alu 33 120 0 5 827 300 243 27 0 chr17 31734937 31735011 -63537640 - PB1D7 SINE Alu -10 110 35 5 827 315 320 72 24 chr17 31735281 31735406 -63537245 - ID_B1 SINE B4 -12 212 82 5 827 259 293 184 22 chr17 31736166 31736302 -63536349 - MER21B LTR ERV1 -703 160 3 5 827 216 275 87 11 chr17 31737377 31737469 -63535182 - PB1D7 SINE Alu -7 113 15 5 827 796 123 15 0 chr17 31737510 31737640 -63535011 - URR1B DNA MER1_type 0 225 94 5 827 923 97 14 7 chr17 31737922 31738067 -63534584 - B1_Mur3 SINE Alu -1 148 3 5 827 3737 47 19 0 chr17 31738208 31738674 -63533977 - MT2C_Mm LTR ERVL 0 475 1 5 827 825 159 146 21 chr17 31739464 31739656 -63532995 - URR1A DNA MER1_type -10 216 1 5 827 506 220 161 0 chr17 31740422 31740540 -63532111 + RSINE1 SINE B4 1 137 -28 5 827 1110 69 0 14 chr17 31740692 31740839 -63531812 - B1_Mus2 SINE Alu -1 146 2 5 827 27 29 0 0 chr17 31741204 31741238 -63531413 + AT_rich Low_complexity Low_complexity 1 34 0 5 827 393 58 0 0 chr17 31741404 31741456 -63531195 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 827 412 160 213 0 chr17 31743700 31743794 -63528857 + PB1D10 SINE Alu 3 116 -1 5 827 367 299 17 0 chr17 31743948 31744065 -63528586 + PB1D7 SINE Alu 2 120 0 5 827 387 279 216 11 chr17 31745017 31745198 -63527453 + ID_B1 SINE B4 2 219 -5 5 827 366 270 45 0 chr17 31745653 31745742 -63526909 + B1F SINE Alu 2 94 -55 5 827 306 247 86 62 chr17 31745741 31745898 -63526753 - RLTR13D3 LTR ERVK -6 1108 981 5 827 1110 68 7 0 chr17 31745956 31746103 -63526548 + B1_Mus1 SINE Alu 1 148 0 5 827 271 119 0 0 chr17 31746335 31746377 -63526274 - B2_Mm2 SINE B2 -153 42 1 5 827 23 78 0 0 chr17 31746409 31746460 -63526191 + AT_rich Low_complexity Low_complexity 1 51 0 5 827 1118 55 7 7 chr17 31746476 31746623 -63526028 - B1_Mus2 SINE Alu 0 147 1 5 827 782 128 92 26 chr17 31747036 31747189 -63525462 - RLTR14 LTR ERV1 -219 163 1 5 827 394 109 0 12 chr17 31747428 31747541 -63525110 - B2_Mm2 SINE B2 -1 194 47 5 827 1097 111 58 0 chr17 31747569 31747740 -63524911 - B2_Mm2 SINE B2 -14 181 1 5 827 959 137 15 67 chr17 31747750 31747945 -63524706 - B2_Mm2 SINE B2 -10 185 1 5 827 1115 68 0 7 chr17 31747968 31748115 -63524536 - B1_Mus2 SINE Alu 0 147 2 5 827 520 169 271 29 chr17 31748120 31748260 -63524391 - B3 SINE B2 -4 212 39 5 827 612 182 50 0 chr17 31748712 31748833 -63523818 - RSINE1 SINE B4 -36 129 3 5 827 355 279 66 19 chr17 31748850 31748956 -63523695 - PB1D9 SINE Alu -3 117 7 5 827 215 316 0 0 chr17 31748908 31748965 -63523686 - B4A SINE B4 -153 139 83 5 827 515 269 108 0 chr17 31749477 31749689 -63522962 + L1MB7 LINE L1 5785 6019 -165 5 827 252 308 75 12 chr17 31750800 31750961 -63521690 + MLT2B4 LTR ERVL 379 549 -7 5 827 1233 105 21 5 chr17 31751759 31751950 -63520701 - B2_Mm2 SINE B2 0 195 2 5 827 537 211 0 37 chr17 31753191 31753299 -63519352 + B3 SINE B2 1 104 -112 5 827 237 338 115 76 chr17 31753299 31753348 -63519303 + RSINE1 SINE B4 2 164 -1 5 827 206 105 26 0 chr17 31753555 31753593 -63519058 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 827 1381 65 21 0 chr17 31755381 31755567 -63517084 + B2_Mm2 SINE B2 2 191 -4 5 827 1113 62 0 27 chr17 31755570 31755720 -63516931 + B1_Mus1 SINE Alu 3 148 0 5 827 207 0 0 0 chr17 31756247 31756270 -63516381 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 827 279 133 0 0 chr17 31756980 31757025 -63515626 + (T)n Simple_repeat Simple_repeat 1 45 0 5 827 1194 41 0 0 chr17 31757026 31757173 -63515478 - B1_Mm SINE Alu 0 147 1 5 827 1412 58 37 0 chr17 31757493 31757681 -63514970 + B2_Mm2 SINE B2 1 195 0 5 827 1127 114 121 24 chr17 31758884 31759090 -63513561 - URR1A DNA MER1_type 0 226 1 5 827 680 271 137 59 chr17 31760700 31761031 -63511620 + MTE2a LTR MaLR 10 374 -45 5 827 260 130 37 0 chr17 31761037 31761091 -63511560 + (CACG)n Simple_repeat Simple_repeat 3 58 0 5 827 324 230 0 26 chr17 31761621 31761697 -63510954 + MTE2a LTR MaLR 216 289 -90 5 827 783 21 0 0 chr17 31762223 31762316 -63510335 + (CA)n Simple_repeat Simple_repeat 2 94 0 5 827 307 55 18 18 chr17 31762681 31762736 -63509915 + (CAAA)n Simple_repeat Simple_repeat 4 58 0 5 827 573 204 76 0 chr17 31763889 31764021 -63508630 + B1_Mur1 SINE Alu 8 149 0 5 827 847 163 7 0 chr17 31764024 31764171 -63508480 + B1_Mus1 SINE Alu 1 148 0 5 827 3596 142 70 30 chr17 31764586 31765313 -63507338 + RMER6A LTR ERVK 1 756 0 5 827 563 131 224 0 chr17 31765560 31765667 -63506984 + ORR1B1 LTR MaLR 264 394 0 5 827 1388 67 5 15 chr17 31766193 31766389 -63506262 + B2_Mm2 SINE B2 2 195 0 5 827 425 125 21 74 chr17 31766608 31766661 -63505990 + B2_Mm2 SINE B2 106 157 -38 5 827 216 0 0 0 chr17 31766661 31766685 -63505966 + (TAA)n Simple_repeat Simple_repeat 3 26 0 5 827 425 125 21 74 chr17 31766685 31766726 -63505925 + B2_Mm2 SINE B2 158 195 0 5 827 1784 101 72 66 chr17 31766807 31767065 -63505586 + ORR1A2 LTR MaLR 8 286 -41 5 827 893 62 139 0 chr17 31767065 31767194 -63505457 + B1_Mus1 SINE Alu 2 148 0 5 827 189 0 0 0 chr17 31767197 31767218 -63505433 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 5 827 1784 101 72 66 chr17 31767218 31767273 -63505378 + ORR1A2 LTR MaLR 287 327 0 5 827 432 271 40 16 chr17 31767311 31767435 -63505216 + ID_B1 SINE B4 85 211 -13 5 827 458 224 0 94 chr17 31767631 31767759 -63504892 + PB1D10 SINE Alu 1 116 -1 5 827 189 0 0 0 chr17 31768369 31768390 -63504261 + (CCA)n Simple_repeat Simple_repeat 1 21 0 5 827 943 92 0 0 chr17 31769377 31769508 -63503143 + B1_Mus2 SINE Alu 7 137 -10 5 827 549 265 122 13 chr17 31770093 31770330 -63502321 + L1M4 LINE L1 5560 5822 -352 5 827 3294 51 7 2 chr17 31770337 31770769 -63501882 + L1Md_F2 LINE L1 6145 6578 -4 5 827 299 253 22 44 chr17 31770818 31770909 -63501742 + B4 SINE B4 1 89 -203 5 827 1895 131 73 10 chr17 31771091 31771476 -63501175 - RMER17C LTR ERVK -1 409 1 5 827 1171 64 22 28 chr17 31771534 31771692 -63500959 + B2_Mm1a SINE B2 1 160 -33 5 827 387 0 0 0 chr17 31771692 31771735 -63500916 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 5 827 1171 64 22 28 chr17 31771735 31771754 -63500897 + B2_Mm1a SINE B2 161 177 -16 5 827 833 298 86 42 chr17 31771768 31771786 -63500865 - MTD LTR MaLR -15 404 387 5 827 186 43 0 0 chr17 31771786 31771809 -63500842 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 827 833 298 86 42 chr17 31771809 31772172 -63500479 - MTD LTR MaLR -33 386 6 5 827 800 175 28 0 chr17 31772441 31772584 -63500067 + B1_Mur2 SINE Alu 1 147 -2 5 827 825 171 126 21 chr17 31772607 31772798 -63499853 - B3 SINE B2 0 216 6 5 827 831 46 70 78 chr17 31773013 31773155 -63499496 + B1_Mm SINE Alu 1 141 -6 5 827 240 111 0 0 chr17 31773155 31773191 -63499460 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 5 827 243 271 18 127 chr17 31774663 31774773 -63497878 + ID_B1 SINE B4 79 176 -48 5 827 338 222 65 32 chr17 31774683 31774776 -63497875 + PB1D9 SINE Alu 6 101 -19 5 827 230 257 86 0 chr17 31774843 31774913 -63497738 - ID_B1 SINE B4 -65 159 84 5 827 414 0 0 0 chr17 31775424 31775470 -63497181 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 827 318 106 0 0 chr17 31775525 31775572 -63497079 + (T)n Simple_repeat Simple_repeat 1 47 0 5 827 1185 48 0 0 chr17 31775572 31775719 -63496932 - B1_Mus2 SINE Alu 0 147 1 5 827 2072 135 32 54 chr17 31775785 31776192 -63496459 + RMER10B LTR ERVL 1 398 0 5 827 1029 38 0 0 chr17 31776206 31776337 -63496314 + B1_Mm SINE Alu 17 147 0 5 827 377 297 21 35 chr17 31776372 31776515 -63496136 - MTD LTR MaLR -1 420 280 5 827 521 176 36 27 chr17 31776513 31776624 -63496027 - MTD LTR MaLR -301 118 7 5 827 259 310 108 27 chr17 31776830 31777052 -63495599 - L1MC4 LINE L1 -430 7612 7373 5 827 353 283 0 11 chr17 31777052 31777145 -63495506 - ID_B1 SINE B4 0 224 133 5 827 267 270 235 11 chr17 31777272 31777459 -63495192 - L1MC4 LINE L1 -714 7328 7100 5 827 748 155 8 8 chr17 31777513 31777643 -63495008 - B1_Mur2 SINE Alu -19 130 1 5 827 957 55 0 0 chr17 31777648 31777776 -63494875 + (TG)n Simple_repeat Simple_repeat 1 128 0 5 827 2021 147 22 58 chr17 31777896 31778308 -63494343 + RMER10B LTR ERVL 1 397 -1 5 827 1253 54 6 0 chr17 31778350 31778517 -63494134 + B2_Mm1a SINE B2 1 168 -25 6 827 663 13 0 0 chr17 31778520 31778596 -63494055 + (GAAA)n Simple_repeat Simple_repeat 2 77 0 6 827 237 281 76 34 chr17 31778697 31778815 -63493836 - L1MB8 LINE L1 -50 6128 6006 6 827 372 349 40 13 chr17 31779302 31779327 -63493324 + B4 SINE B4 60 150 -142 6 827 679 153 0 0 chr17 31779327 31779438 -63493213 + B1_Mur4 SINE Alu 1 111 -39 6 827 372 349 40 13 chr17 31779438 31779453 -63493198 + B4 SINE B4 151 214 -78 6 827 1505 32 21 5 chr17 31779668 31779858 -63492793 - B2_Mm1a SINE B2 0 193 1 6 827 1113 55 7 0 chr17 31780308 31780454 -63492197 - B1_Mus1 SINE Alu -1 147 1 6 827 488 270 126 50 chr17 31780535 31780757 -63491894 - ORR1E LTR MaLR -120 239 1 6 827 1161 55 0 0 chr17 31781756 31781901 -63490750 - B1_Mus1 SINE Alu -3 145 1 6 827 288 272 34 81 chr17 31781959 31782107 -63490544 - MLT1A1 LTR MaLR -78 330 190 6 827 762 284 125 29 chr17 31782223 31782495 -63490156 + MTEa LTR MaLR 23 320 -59 6 827 509 206 197 69 chr17 31782685 31782873 -63489778 - URR1B DNA MER1_type -12 213 2 6 827 1086 106 0 6 chr17 31782879 31783041 -63489610 + B2_Mm2 SINE B2 15 175 -20 6 827 1231 73 44 11 chr17 31783107 31783288 -63489363 - B2_Mm2 SINE B2 -7 188 2 6 827 1522 47 0 5 chr17 31792175 31792367 -63480284 - B2_Mm1a SINE B2 -1 192 2 6 827 657 130 19 2 chr17 31793077 31793201 -63479450 + B1_Mm SINE Alu 1 124 -24 6 827 958 80 58 0 chr17 31793295 31793433 -63479218 + B1_Mus1 SINE Alu 3 148 0 6 827 192 40 0 0 chr17 31793530 31793555 -63479096 + (T)n Simple_repeat Simple_repeat 1 25 0 6 827 731 76 246 0 chr17 31793555 31793673 -63478978 - B1_Mm SINE Alu 0 147 1 6 827 1004 59 136 40 chr17 31793940 31793959 -63478692 - B2_Mm2 SINE B2 0 195 177 6 827 1097 41 7 27 chr17 31793959 31794108 -63478543 - B1_Mus1 SINE Alu -2 146 1 6 827 1004 59 136 40 chr17 31794108 31794265 -63478386 - B2_Mm2 SINE B2 -19 176 2 6 827 492 125 120 37 chr17 31794265 31794368 -63478283 - B1_Mur2 SINE Alu -37 112 1 6 827 309 271 73 18 chr17 31794270 31794379 -63478272 - ID_B1 SINE B4 -41 183 69 6 827 488 262 25 63 chr17 31794433 31794592 -63478059 - B3A SINE B2 -45 153 1 6 827 478 230 153 55 chr17 31796501 31796703 -63475948 - ID_B1 SINE B4 0 224 3 6 827 820 174 7 7 chr17 31797004 31797154 -63475497 - B1_Mur4 SINE Alu 0 150 1 6 827 387 0 0 0 chr17 31797234 31797277 -63475374 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 6 827 569 210 32 8 chr17 31797350 31797475 -63475176 + B1_Mur1 SINE Alu 17 144 -5 6 827 490 255 26 142 chr17 31797497 31797591 -63475060 + ID_B1 SINE B4 17 222 -2 6 827 771 158 29 0 chr17 31797591 31797730 -63474921 + B1_Mur4 SINE Alu 6 148 -2 6 827 315 0 0 0 chr17 31798541 31798576 -63474075 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 6 827 908 118 7 27 chr17 31798576 31798724 -63473927 - B1_Mm SINE Alu 0 147 3 6 827 729 224 14 0 chr17 31798730 31798873 -63473778 - B1_Mur1 SINE Alu 0 149 5 6 827 204 242 32 0 chr17 31798892 31798910 -63473741 + (CAAAC)n Simple_repeat Simple_repeat 1 18 0 6 827 780 132 81 0 chr17 31798910 31799046 -63473605 + B1_Mus1 SINE Alu 1 147 -1 6 827 204 242 32 0 chr17 31799046 31799089 -63473562 + (CAAAC)n Simple_repeat Simple_repeat 4 48 0 6 827 242 87 0 21 chr17 31799107 31799154 -63473497 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 6 827 256 209 9 157 chr17 31799159 31799267 -63473384 + MT2B LTR ERVL 165 256 -345 6 827 623 227 14 34 chr17 31799170 31799316 -63473335 + B1_Mur2 SINE Alu 7 149 0 6 827 475 229 115 0 chr17 31799960 31800082 -63472569 + B3 SINE B2 78 213 -3 6 827 333 0 0 0 chr17 31800099 31800136 -63472515 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 827 184 284 85 12 chr17 31800206 31800288 -63472363 + MIRm SINE MIR 8 95 -181 6 827 934 96 73 0 chr17 31800374 31800510 -63472141 + B1_Mm SINE Alu 2 147 0 6 827 373 60 0 0 chr17 31800703 31800753 -63471898 - PB1D9 SINE Alu -70 50 1 6 827 602 176 44 32 chr17 31800754 31800912 -63471739 - RMER6B LTR ERVK -213 248 89 6 827 931 77 92 0 chr17 31800915 31801045 -63471606 + B1_Mus2 SINE Alu 2 143 -4 6 827 246 95 0 0 chr17 31801047 31801089 -63471562 + (A)n Simple_repeat Simple_repeat 1 42 0 6 827 519 128 0 164 chr17 31801089 31801211 -63471440 - RMER6B LTR ERVK -359 102 1 6 827 239 179 0 0 chr17 31801215 31801254 -63471397 + L1MB5 LINE L1 6029 6067 -107 6 827 457 284 7 47 chr17 31801258 31801406 -63471245 + B1F SINE Alu 7 148 -1 6 827 230 293 37 0 chr17 31801892 31801974 -63470677 + MLT1A1 LTR MaLR 36 120 -288 6 827 450 0 0 0 chr17 31802075 31802125 -63470526 + (TTCC)n Simple_repeat Simple_repeat 3 52 0 6 827 499 82 20 39 chr17 31802125 31802227 -63470424 + (TCC)n Simple_repeat Simple_repeat 3 102 0 6 827 1114 55 7 0 chr17 31802229 31802374 -63470277 - B1_Mus1 SINE Alu 0 148 3 6 827 638 75 0 11 chr17 31802374 31802468 -63470183 + (TTTTC)n Simple_repeat Simple_repeat 4 96 0 6 827 443 230 7 23 chr17 31802551 31802660 -63469991 + MLT1A1 LTR MaLR 275 392 -16 6 827 657 172 6 152 chr17 31802785 31802956 -63469695 - B1_Mur3 SINE Alu -1 148 3 6 827 544 62 25 0 chr17 31802964 31803045 -63469606 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 6 827 382 233 84 70 chr17 31803082 31803225 -63469426 + MTE2a LTR MaLR 97 241 -138 6 827 520 254 41 0 chr17 31803300 31803422 -63469229 + MTE2a LTR MaLR 194 320 -59 6 827 731 259 0 62 chr17 31803422 31803632 -63469019 + B3A SINE B2 2 198 0 6 827 472 237 7 58 chr17 31803640 31803779 -63468872 + ID_B1 SINE B4 78 209 -15 6 827 739 161 14 49 chr17 31803655 31803783 -63468868 + B1_Mur1 SINE Alu 10 138 -11 6 827 306 0 0 0 chr17 31803783 31803817 -63468834 + (CAA)n Simple_repeat Simple_repeat 2 35 0 6 827 739 161 14 49 chr17 31803817 31803832 -63468819 + B1_Mur1 SINE Alu 139 148 -1 6 827 317 155 41 27 chr17 31803824 31803897 -63468754 + MTE2a LTR MaLR 305 378 -1 6 827 1856 98 11 151 chr17 31803961 31804332 -63468319 - ORR1A2 LTR MaLR -8 319 1 6 827 531 0 0 0 chr17 31805035 31805094 -63467557 + (TG)n Simple_repeat Simple_repeat 1 59 0 6 827 459 244 99 31 chr17 31805325 31805486 -63467165 - MTEa LTR MaLR -7 372 201 6 827 272 216 0 0 chr17 31805764 31805815 -63466836 + LTR16D LTR ERVL 601 651 0 6 827 1272 115 21 0 chr17 31805901 31806092 -63466559 - B2_Mm2 SINE B2 0 195 1 6 827 826 163 7 33 chr17 31806142 31806294 -63466357 + B1_Mur4 SINE Alu 1 148 -2 6 827 741 193 15 15 chr17 31806564 31806716 -63465935 + B1_Mur1 SINE Alu 1 149 0 6 827 222 205 0 0 chr17 31806761 31806800 -63465851 + (ATG)n Simple_repeat Simple_repeat 3 41 0 6 827 1403 72 0 15 chr17 31807503 31807699 -63464952 - B2_Mm2 SINE B2 -1 194 2 6 827 204 237 8 63 chr17 31807831 31807957 -63464694 + (CA)n Simple_repeat Simple_repeat 1 119 0 6 827 27 0 0 0 chr17 31808377 31808404 -63464247 + AT_rich Low_complexity Low_complexity 1 27 0 6 827 345 250 42 0 chr17 31808503 31808599 -63464052 + Tigger7 DNA MER2_type 286 385 -2106 6 827 356 302 206 10 chr17 31808655 31808859 -63463792 - MER97a DNA MER1_type? -56 838 595 6 827 607 311 149 22 chr17 31809222 31809467 -63463184 - Tigger7 DNA MER2_type -1942 549 264 6 827 6205 43 31 0 chr17 31809467 31810251 -63462400 + RLTR13C2 LTR ERVK 1 808 0 6 827 607 311 149 22 chr17 31810251 31810327 -63462324 - Tigger7 DNA MER2_type -2228 263 187 6 827 425 364 86 12 chr17 31810461 31810717 -63461934 - MLT1B LTR MaLR -91 299 25 6 827 405 226 7 135 chr17 31810851 31810999 -63461652 + MT2B LTR ERVL 136 264 -337 6 827 926 77 0 2 chr17 31810887 31811024 -63461627 + B1_Mus2 SINE Alu 5 138 -10 6 827 696 201 111 71 chr17 31811031 31811229 -63461422 - B3 SINE B2 -8 208 3 6 827 706 120 134 16 chr17 31811704 31811831 -63460820 - B1_Mur3 SINE Alu -5 144 3 6 827 1308 72 28 0 chr17 31811893 31812073 -63460578 + B2_Mm1t SINE B2 2 186 -7 6 827 279 203 0 0 chr17 31812157 31812216 -63460435 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 6 827 988 238 5 28 chr17 31812218 31812430 -63460221 - ID_B1 SINE B4 -16 208 2 6 827 233 279 69 103 chr17 31812434 31812550 -63460101 - B1F1 SINE Alu -2 147 36 6 827 222 105 0 0 chr17 31812603 31812641 -63460010 + (TTA)n Simple_repeat Simple_repeat 2 39 0 6 827 245 283 165 28 chr17 31812665 31812774 -63459877 - RSINE1 SINE B4 -35 130 7 6 827 2024 184 61 124 chr17 31813122 31813368 -63459283 + RLTR18B LTR ERVK 2 261 -251 6 827 1194 70 46 6 chr17 31813368 31813541 -63459110 - B2_Mm2 SINE B2 -14 181 2 6 827 2024 184 61 124 chr17 31813541 31813834 -63458817 + RLTR18B LTR ERVK 262 507 -5 6 827 194 0 39 0 chr17 31814436 31814462 -63458189 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 827 236 192 0 19 chr17 31818207 31818260 -63454391 + CT-rich Low_complexity Low_complexity 2 53 0 6 827 303 104 0 0 chr17 31818933 31818981 -63453670 + (TGG)n Simple_repeat Simple_repeat 1 48 0 6 827 384 103 0 0 chr17 31819792 31819850 -63452801 + (TCCC)n Simple_repeat Simple_repeat 2 59 0 6 827 1815 133 43 60 chr17 31820184 31820415 -63452236 - RMER17C LTR ERVK 0 410 201 6 827 1220 86 6 0 chr17 31820415 31820590 -63452061 + (GGAGAA)n Simple_repeat Simple_repeat 3 178 0 6 827 1815 133 43 60 chr17 31820590 31820775 -63451876 - RMER17C LTR ERVK -210 200 1 6 827 570 240 39 60 chr17 31821106 31821288 -63451363 - RMER10A LTR ERVL -264 178 1 6 827 1023 253 65 65 chr17 31821360 31821570 -63451081 - MTD LTR MaLR -1 418 209 6 827 1274 89 15 40 chr17 31821570 31821768 -63450883 - B2_Mm2 SINE B2 -2 193 1 6 827 1023 253 65 65 chr17 31821768 31821929 -63450722 - MTD LTR MaLR -211 208 47 6 827 1377 140 0 13 chr17 31822185 31822410 -63450241 + URR1A DNA MER1_type 5 226 0 6 827 187 226 132 0 chr17 31823134 31823187 -63449464 + L3 LINE CR1 2153 2212 -2277 6 827 539 166 40 11 chr17 31823620 31823892 -63448759 + (CA)n Simple_repeat Simple_repeat 1 280 0 7 827 189 0 0 0 chr17 31823892 31823913 -63448738 + (TA)n Simple_repeat Simple_repeat 1 21 0 7 827 539 154 30 12 chr17 31823913 31823925 -63448726 + (CA)n Simple_repeat Simple_repeat 2 14 0 7 827 1072 75 7 7 chr17 31823951 31824098 -63448553 - B1_Mus1 SINE Alu 0 148 2 7 827 1108 114 6 17 chr17 31824200 31824221 -63448430 - B2_Mm2 SINE B2 -19 176 155 7 827 225 0 0 0 chr17 31824221 31824246 -63448405 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 7 827 1108 114 6 17 chr17 31824246 31824402 -63448249 - B2_Mm2 SINE B2 -41 154 1 7 827 734 219 43 16 chr17 31824751 31824946 -63447705 - B3 SINE B2 -2 196 1 7 827 610 253 151 0 chr17 31825637 31825823 -63446828 + ID_B1 SINE B4 2 215 -9 7 827 555 16 0 0 chr17 31826301 31826365 -63446286 + (TTTC)n Simple_repeat Simple_repeat 1 64 0 7 827 966 72 103 13 chr17 31826365 31826513 -63446138 - B2_Mm2 SINE B2 -10 185 23 7 827 1320 204 119 26 chr17 31826530 31826907 -63445744 - MTD LTR MaLR -3 416 5 7 827 2354 62 6 63 chr17 31827163 31827510 -63445141 - ORR1A2 LTR MaLR 0 327 1 7 827 215 209 2 90 chr17 31829094 31829171 -63443480 - MIR SINE MIR -103 165 87 7 827 1100 106 33 22 chr17 31829423 31829607 -63443044 + B2_Mm2 SINE B2 1 186 -9 7 827 450 0 0 0 chr17 31829954 31830004 -63442647 + (TTAGGG)n Simple_repeat Simple_repeat 2 51 0 7 827 193 310 14 14 chr17 31830767 31830839 -63441812 + MIRm SINE MIR 100 171 -105 7 827 459 0 0 0 chr17 31831388 31831439 -63441212 + (TG)n Simple_repeat Simple_repeat 1 51 0 7 827 225 160 40 0 chr17 31831800 31831850 -63440801 + CT-rich Low_complexity Low_complexity 1 52 0 7 827 401 210 9 99 chr17 31831850 31831961 -63440690 - PB1D9 SINE Alu -1 119 19 7 827 1539 42 0 10 chr17 31832243 31832437 -63440214 - B2_Mm1a SINE B2 0 193 2 7 827 483 297 12 18 chr17 31832765 31832933 -63439718 + HAL1-2a_MD LINE L1 2339 2505 -519 7 827 3169 43 5 0 chr17 31832973 31833367 -63439284 - MTA_Mm LTR MaLR 0 396 1 7 827 4310 75 28 145 chr17 31833367 31834173 -63438478 - MTA_Mm-int LTR MaLR 0 1098 391 7 827 1257 109 5 5 chr17 31834173 31834367 -63438284 - B2_Mm2 SINE B2 -1 194 1 7 827 4310 75 28 145 chr17 31834367 31834415 -63438236 - MTA_Mm-int LTR MaLR -708 390 344 7 827 261 307 138 44 chr17 31834471 31834631 -63438020 - RLTR22_Mur LTR ERVK -387 1461 1287 7 827 218 302 6 64 chr17 31834717 31834890 -63437761 + (TG)n Simple_repeat Simple_repeat 1 163 0 7 827 1824 133 43 12 chr17 31836219 31836547 -63436104 + ORR1A1 LTR MaLR 1 338 -8 7 827 634 130 74 0 chr17 31836578 31836686 -63435965 - B1_Mus2 SINE Alu -1 146 31 7 827 756 265 92 44 chr17 31837223 31837495 -63435156 + B4A SINE B4 2 286 -6 7 827 1289 96 21 0 chr17 31837618 31837806 -63434845 + B2_Mm2 SINE B2 2 193 -2 7 827 827 140 0 20 chr17 31837821 31837967 -63434684 + B1_Mus2 SINE Alu 5 147 0 7 827 180 0 0 0 chr17 31837967 31837987 -63434664 + (CAAAAA)n Simple_repeat Simple_repeat 5 24 0 7 827 548 268 150 66 chr17 31838006 31838326 -63434325 + ORR1E LTR MaLR 13 359 0 7 827 1294 17 29 0 chr17 31838457 31838630 -63434021 + (TTC)n Simple_repeat Simple_repeat 3 180 0 7 827 813 164 18 0 chr17 31838630 31838650 -63434001 + polypyrimidine Low_complexity Low_complexity 155 175 0 7 827 1354 6 29 0 chr17 31838650 31838825 -63433826 + (TTC)n Simple_repeat Simple_repeat 1 180 0 7 827 813 164 18 0 chr17 31838825 31838975 -63433676 + CT-rich Low_complexity Low_complexity 3 154 0 7 827 1165 101 16 22 chr17 31838999 31839181 -63433470 - B2_Mm2 SINE B2 -14 181 1 7 827 1112 75 91 6 chr17 31839204 31839379 -63433272 - B2_Mm2 SINE B2 -4 191 2 7 827 21 0 0 0 chr17 31839410 31839431 -63433220 + AT_rich Low_complexity Low_complexity 1 21 0 7 827 865 112 0 20 chr17 31839490 31839636 -63433015 + URR1B DNA MER1_type 83 225 0 7 827 447 19 0 0 chr17 31841087 31841139 -63431512 + (CA)n Simple_repeat Simple_repeat 1 52 0 7 827 792 142 27 54 chr17 31841204 31841353 -63431298 + B1_Mur1 SINE Alu 5 149 0 7 827 27 0 0 0 chr17 31841354 31841381 -63431270 + AT_rich Low_complexity Low_complexity 1 27 0 7 827 207 0 0 0 chr17 31841381 31841404 -63431247 + (GGGTG)n Simple_repeat Simple_repeat 2 24 0 7 827 390 284 189 0 chr17 31841418 31841545 -63431106 + RSINE1 SINE B4 13 163 -2 7 827 407 245 19 19 chr17 31841593 31841701 -63430950 + PB1D10 SINE Alu 10 117 0 7 827 1117 118 6 0 chr17 31841840 31842009 -63430642 + B2_Mm1t SINE B2 2 171 -22 7 827 349 142 0 5 chr17 31842064 31842129 -63430522 + B2_Mm2 SINE B2 47 109 -107 7 827 324 0 0 0 chr17 31842145 31842181 -63430470 + (CAAT)n Simple_repeat Simple_repeat 2 37 0 7 827 508 239 0 16 chr17 31843209 31843456 -63429195 + (TTCA)n Simple_repeat Simple_repeat 1 242 0 7 827 405 39 0 0 chr17 31843489 31843540 -63429111 + (CTCA)n Simple_repeat Simple_repeat 1 51 0 7 827 252 318 40 0 chr17 31843626 31843777 -63428874 - L1M5 LINE L1 -404 5836 5680 7 827 3143 98 10 33 chr17 31844764 31845250 -63427401 + MT2C_Mm LTR ERVL 1 475 0 7 827 303 28 0 0 chr17 31845331 31845367 -63427284 + (CACCC)n Simple_repeat Simple_repeat 3 38 0 7 827 193 198 49 16 chr17 31845431 31845554 -63427097 + (CATATA)n Simple_repeat Simple_repeat 6 132 0 7 827 368 111 16 0 chr17 31845634 31845697 -63426954 + (CA)n Simple_repeat Simple_repeat 1 64 0 7 827 573 218 98 0 chr17 31846879 31847012 -63425639 + B1_Mus1 SINE Alu 3 148 0 7 827 1017 93 14 0 chr17 31847134 31847274 -63425377 - B1_Mur3 SINE Alu -7 142 1 7 827 414 261 0 0 chr17 31847720 31847858 -63424793 + (TG)n Simple_repeat Simple_repeat 1 138 0 7 827 391 221 16 0 chr17 31847899 31848021 -63424630 + (TG)n Simple_repeat Simple_repeat 1 124 0 7 827 935 222 68 0 chr17 31848021 31848255 -63424396 - B4A SINE B4 0 292 43 7 827 1118 117 0 8 chr17 31848396 31848665 -63423986 + (TTTC)n Simple_repeat Simple_repeat 1 266 0 7 827 796 134 59 7 chr17 31848752 31848887 -63423764 - B1_Mur4 SINE Alu -6 144 3 7 827 1062 246 49 46 chr17 31849421 31849493 -63423158 - MTE2b LTR MaLR -71 308 244 7 827 4892 114 15 7 chr17 31849493 31850243 -63422408 + RMER6A LTR ERVK 1 756 0 7 827 1062 246 49 46 chr17 31850243 31850477 -63422174 - MTE2b LTR MaLR -136 243 1 7 828 235 311 167 24 chr17 31850605 31850773 -63421878 + L1MEc LINE L1 1259 1450 -4965 7 828 269 267 47 0 chr17 31851195 31851281 -63421370 + L1MEc LINE L1 1726 1815 -4585 7 828 207 0 0 0 chr17 31851338 31851361 -63421290 + (A)n Simple_repeat Simple_repeat 1 23 0 7 828 501 187 213 32 chr17 31851508 31851663 -63420988 + B3A SINE B2 1 183 -15 7 828 219 69 0 0 chr17 31851665 31851694 -63420957 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 828 665 144 53 37 chr17 31851719 31851901 -63420750 + B2_Mm2 SINE B2 1 184 -9 7 828 301 276 47 9 chr17 31852080 31852215 -63420436 + L1MEc LINE L1 2371 2508 -3811 7 828 2437 68 6 18 chr17 31852336 31852667 -63419984 + ORR1A2 LTR MaLR 1 327 0 7 828 852 253 10 0 chr17 31852896 31853090 -63419561 + ID_B1 SINE B4 2 197 -27 7 828 261 317 8 68 chr17 31852977 31853109 -63419542 - YREP_Mm Unknown Unknown -1500 312 189 7 828 39 0 0 0 chr17 31853228 31853267 -63419384 + AT_rich Low_complexity Low_complexity 1 39 0 7 828 436 214 110 8 chr17 31853575 31853693 -63418958 - MLT1B LTR MaLR -30 360 231 7 828 253 267 0 0 chr17 31854800 31854860 -63417791 + RSINE1 SINE B4 84 143 -22 7 828 255 31 0 0 chr17 31854871 31854903 -63417748 + (CAA)n Simple_repeat Simple_repeat 2 33 0 7 828 2136 93 29 9 chr17 31855400 31855716 -63416935 + ORR1A2 LTR MaLR 1 322 -5 7 828 3045 63 5 2 chr17 31856096 31856491 -63416160 + MTB LTR MaLR 5 400 0 7 828 576 42 0 0 chr17 31857723 31857794 -63414857 + (TA)n Simple_repeat Simple_repeat 1 71 0 7 828 1876 131 56 129 chr17 31857794 31858232 -63414419 + RMER6B LTR ERVK 55 460 -1 7 828 1173 253 76 0 chr17 31858262 31858566 -63414085 - MTEa LTR MaLR -45 334 8 7 828 180 282 84 0 chr17 31859598 31859669 -63412982 + MIRc SINE MIR 122 198 -70 7 828 21 36 0 0 chr17 31860205 31860233 -63412418 + AT_rich Low_complexity Low_complexity 1 28 0 7 828 2228 68 3 119 chr17 31860275 31860645 -63412006 + ORR1A2 LTR MaLR 1 327 0 7 828 23 0 0 0 chr17 31860761 31860784 -63411867 + AT_rich Low_complexity Low_complexity 1 23 0 7 828 243 61 0 0 chr17 31861777 31861810 -63410841 + (TGGGGG)n Simple_repeat Simple_repeat 2 34 0 7 828 241 299 25 25 chr17 31863539 31863618 -63409033 + MLT1J LTR MaLR 286 364 -148 7 828 251 0 0 114 chr17 31863794 31863838 -63408813 + (T)n Simple_repeat Simple_repeat 1 39 0 7 828 270 73 0 0 chr17 31866498 31866539 -63406112 + (A)n Simple_repeat Simple_repeat 1 41 0 7 828 584 290 61 81 chr17 31866539 31866755 -63405896 - MLT1A0 LTR MaLR -25 349 133 7 828 823 299 58 28 chr17 31866755 31867119 -63405532 - MTEa LTR MaLR -4 375 1 7 828 584 287 58 84 chr17 31867119 31867246 -63405405 - MLT1A0 LTR MaLR -233 132 5 7 828 950 138 72 39 chr17 31868505 31868657 -63403994 + B2_Mm2 SINE B2 1 163 -32 7 828 243 0 0 0 chr17 31868657 31868684 -63403967 + (TATG)n Simple_repeat Simple_repeat 1 27 0 7 828 950 138 72 39 chr17 31868684 31868712 -63403939 + B2_Mm2 SINE B2 164 187 -8 7 828 547 82 0 0 chr17 31868725 31868798 -63403853 - B2_Mm2 SINE B2 -32 163 91 7 828 230 250 33 0 chr17 31869459 31869519 -63403132 - MER82 DNA MER2_type -32 621 560 7 828 563 291 191 28 chr17 31869587 31869944 -63402707 - MER82 DNA MER2_type -189 464 50 7 828 2023 112 60 29 chr17 31870722 31871070 -63401581 - ORR1B2 LTR MaLR -8 359 1 7 828 4262 81 12 2 chr17 31872186 31872764 -63399887 - MT2B2 LTR ERVL 0 584 1 7 828 2043 119 3 9 chr17 31872872 31873195 -63399456 + ORR1A4 LTR MaLR 1 321 -8 7 828 222 62 0 0 chr17 31874347 31874379 -63398272 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 7 828 248 295 37 28 chr17 31874427 31874535 -63398116 + MamRep4096 DNA hAT? 117 225 -201 7 828 273 216 119 63 chr17 31874803 31874946 -63397705 + Lx4A LINE L1 6906 7056 -2 8 828 277 270 170 48 chr17 31875642 31875848 -63396803 + MLT1D LTR MaLR 172 402 -103 8 828 961 315 68 38 chr17 31876778 31877279 -63395372 + L1MD LINE L1 4843 5358 -788 8 828 656 313 18 5 chr17 31877389 31877607 -63395044 + L1MD LINE L1 5548 5768 -591 8 828 243 133 0 0 chr17 31877700 31877745 -63394906 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 8 828 272 159 43 0 chr17 31877751 31877820 -63394831 + CT-rich Low_complexity Low_complexity 1 72 0 8 828 227 262 0 0 chr17 31877820 31877881 -63394770 - PB1D10 SINE Alu -16 101 41 8 828 629 263 100 13 chr17 31878114 31878401 -63394250 - MTE2a LTR MaLR -18 361 33 8 828 288 0 0 0 chr17 31879142 31879174 -63393477 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 828 804 202 4 0 chr17 31879671 31879909 -63392742 + (TG)n Simple_repeat Simple_repeat 1 239 0 8 828 1202 167 68 23 chr17 31880434 31880731 -63391920 + MTD LTR MaLR 73 421 0 8 828 846 320 14 14 chr17 31880811 31881061 -63391590 + B4A SINE B4 1 250 -42 8 828 1925 111 33 60 chr17 31881061 31881397 -63391254 - ORR1A4 LTR MaLR 0 329 3 8 828 846 320 14 14 chr17 31881397 31881428 -63391223 + B4A SINE B4 251 281 -11 8 828 185 163 0 20 chr17 31881761 31881788 -63390863 + T-rich Low_complexity Low_complexity 24 50 0 8 828 1125 62 7 0 chr17 31881788 31881933 -63390718 - B1_Mus2 SINE Alu 0 147 2 8 828 185 163 0 20 chr17 31881933 31881955 -63390696 + T-rich Low_complexity Low_complexity 2 23 0 8 828 25 31 0 0 chr17 31881962 31881994 -63390657 + AT_rich Low_complexity Low_complexity 1 32 0 8 828 2048 128 125 3 chr17 31882121 31882489 -63390162 + MTC LTR MaLR 1 413 -8 8 828 580 304 4 57 chr17 31882492 31882719 -63389932 - Lx8 LINE L1 -145 7328 7114 8 828 232 317 24 24 chr17 31885613 31885739 -63386912 + (TG)n Simple_repeat Simple_repeat 2 127 0 8 828 201 39 0 0 chr17 31885825 31885851 -63386800 + (TG)n Simple_repeat Simple_repeat 2 27 0 8 828 185 218 0 13 chr17 31886583 31886662 -63385989 + (GGCTG)n Simple_repeat Simple_repeat 5 82 0 8 828 225 94 0 0 chr17 31887743 31887775 -63384876 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 8 828 1021 230 99 107 chr17 31887780 31888135 -63384516 + MTE2a LTR MaLR 1 352 -27 8 828 483 148 0 0 chr17 31888138 31888226 -63384425 + (TC)n Simple_repeat Simple_repeat 1 88 0 8 828 229 283 0 32 chr17 31888816 31888878 -63383773 + polypyrimidine Low_complexity Low_complexity 1 60 0 8 828 3311 50 5 0 chr17 31889189 31889585 -63383066 + MTB LTR MaLR 1 398 -2 8 828 435 311 45 0 chr17 31891520 31891652 -63380999 + B4A SINE B4 153 290 -2 8 828 947 171 193 0 chr17 31891686 31891867 -63380784 - B3 SINE B2 0 216 1 8 828 501 261 60 0 chr17 31892046 31892180 -63380471 - ID_B1 SINE B4 -9 215 74 8 828 384 345 115 31 chr17 31892205 31892465 -63380186 - L1MB3 LINE L1 -321 5862 5581 8 828 277 188 22 111 chr17 31892682 31892772 -63379879 - MER97c DNA MER1_type? -998 92 11 8 828 874 262 48 0 chr17 31892980 31893186 -63379465 + ID_B1 SINE B4 9 224 0 8 828 507 276 44 12 chr17 31893191 31893339 -63379312 + ID_B1 SINE B4 6 158 -134 8 828 253 319 20 94 chr17 31893449 31893515 -63379136 + B1F SINE Alu 11 148 -1 8 828 330 259 0 24 chr17 31893515 31893598 -63379053 + ID_B1 SINE B4 143 223 -1 8 828 217 0 61 0 chr17 31893645 31893678 -63378973 + (CAAAAA)n Simple_repeat Simple_repeat 1 35 0 8 828 1272 88 54 11 chr17 31894112 31894296 -63378355 + B2_Mm1t SINE B2 2 193 0 8 828 322 167 0 0 chr17 31894310 31894370 -63378281 + PB1D9 SINE Alu 11 70 -50 8 828 198 71 0 0 chr17 31894420 31894448 -63378203 + (TG)n Simple_repeat Simple_repeat 1 28 0 8 828 28 48 0 0 chr17 31894480 31894522 -63378129 + AT_rich Low_complexity Low_complexity 1 42 0 8 828 603 189 158 0 chr17 31894721 31894848 -63377803 + B1_Mus2 SINE Alu 1 147 0 8 828 1156 84 24 6 chr17 31894889 31895056 -63377595 + B2_Mm2 SINE B2 1 170 -25 8 828 30 27 0 0 chr17 31895078 31895115 -63377536 + AT_rich Low_complexity Low_complexity 1 37 0 8 828 1372 95 11 0 chr17 31896169 31896358 -63376293 + B2_Mm1t SINE B2 2 192 -1 8 828 3328 56 5 0 chr17 31896618 31897012 -63375639 - MTA_Mm LTR MaLR 0 396 1 8 828 659 201 7 0 chr17 31897694 31897843 -63374808 + CT-rich Low_complexity Low_complexity 1 150 0 8 828 1071 135 0 0 chr17 31897843 31897991 -63374660 - B1_Mur4 SINE Alu 0 150 3 8 828 568 275 63 17 chr17 31898606 31898780 -63373871 + RMER30 DNA MER1_type 2 183 -19 8 828 274 324 0 0 chr17 31898789 31898860 -63373791 - MLT1J LTR MaLR -194 318 248 8 828 2097 141 66 0 chr17 31900805 31901167 -63371484 + ORR1B1 LTR MaLR 1 386 -8 8 828 1716 73 4 0 chr17 31901744 31901977 -63370674 - ORR1A2 LTR MaLR 0 327 94 8 828 180 0 0 0 chr17 31901980 31902000 -63370651 + (T)n Simple_repeat Simple_repeat 1 20 0 8 828 935 25 0 0 chr17 31902000 31902118 -63370533 - B1_Mus1 SINE Alu 0 148 31 8 828 549 168 0 94 chr17 31902119 31902199 -63370452 - ORR1A2 LTR MaLR -221 125 51 8 828 506 53 40 0 chr17 31902199 31902275 -63370376 - L1Md_F2 LINE L1 -3 6579 6501 8 828 549 168 0 94 chr17 31902275 31902332 -63370319 - ORR1A2 LTR MaLR -296 50 1 8 828 243 378 19 39 chr17 31903065 31903219 -63369432 + MER102b DNA MER1_type 22 172 -169 8 828 846 197 0 4 chr17 31903375 31903612 -63369039 + (TGAA)n Simple_repeat Simple_repeat 1 236 0 8 828 360 0 0 0 chr17 31904590 31904630 -63368021 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 828 543 250 0 0 chr17 31905495 31905675 -63366976 + (TG)n Simple_repeat Simple_repeat 1 180 0 8 828 194 91 30 0 chr17 31905688 31905721 -63366930 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 8 828 312 200 0 0 chr17 31905728 31905808 -63366843 + (TG)n Simple_repeat Simple_repeat 1 80 0 8 828 399 254 0 0 chr17 31905836 31905974 -63366677 + (TG)n Simple_repeat Simple_repeat 2 139 0 8 828 1488 237 47 19 chr17 31906005 31906363 -63366288 + MTE2b-int LTR MaLR 974 1341 -239 8 828 1406 210 58 19 chr17 31906363 31906589 -63366062 + ORR1D1 LTR MaLR 1 230 -144 8 828 441 0 0 0 chr17 31906589 31906638 -63366013 + (CCTG)n Simple_repeat Simple_repeat 4 52 0 8 828 1406 210 58 19 chr17 31906638 31906724 -63365927 + ORR1D1 LTR MaLR 231 328 -46 8 828 1424 65 11 0 chr17 31906724 31906908 -63365743 - B2_Mm1t SINE B2 -6 187 2 8 828 1406 210 58 19 chr17 31906908 31906954 -63365697 + ORR1D1 LTR MaLR 329 373 -1 8 828 485 218 82 8 chr17 31906996 31907130 -63365521 + MTE2b-int LTR MaLR 1423 1566 -14 8 828 1566 213 25 71 chr17 31907132 31907526 -63365125 + MTE2b LTR MaLR 2 377 -2 8 828 1757 200 98 34 chr17 31907531 31908020 -63364631 - RLTR20A LTR ERVK 0 541 1 8 828 1281 195 119 3 chr17 31908071 31908390 -63364261 - ORR1D2 LTR MaLR 0 370 15 8 828 189 0 0 0 chr17 31909116 31909137 -63363514 + (TG)n Simple_repeat Simple_repeat 2 22 0 8 828 954 227 58 19 chr17 31910272 31910479 -63362172 - B3 SINE B2 -1 215 1 8 828 1022 124 69 23 chr17 31910934 31911107 -63361544 + B2_Mm2 SINE B2 1 181 -14 8 828 1170 82 7 0 chr17 31911117 31911263 -63361388 - B1_Mm SINE Alu 0 147 1 8 828 261 75 0 0 chr17 31911264 31911304 -63361347 + (T)n Simple_repeat Simple_repeat 1 40 0 8 828 207 218 0 0 chr17 31912061 31912116 -63360535 + G-rich Low_complexity Low_complexity 4 58 0 8 828 1187 35 43 0 chr17 31912293 31912434 -63360217 - B1_Mm SINE Alu 0 147 1 8 828 990 194 284 14 chr17 31912578 31912870 -63359781 - ORR1D1 LTR MaLR -1 373 3 8 828 573 42 0 0 chr17 31914344 31914416 -63358235 + (CA)n Simple_repeat Simple_repeat 1 72 0 8 828 192 158 0 0 chr17 31914638 31914676 -63357975 + CT-rich Low_complexity Low_complexity 1 38 0 8 828 267 189 120 13 chr17 31915168 31915243 -63357408 + ID4 SINE ID 1 83 0 8 828 234 288 35 35 chr17 31915996 31916140 -63356511 + (TG)n Simple_repeat Simple_repeat 2 145 0 8 828 215 241 36 36 chr17 31916276 31916388 -63356263 + (TATG)n Simple_repeat Simple_repeat 1 112 0 8 828 346 341 18 18 chr17 31917244 31917414 -63355237 + HAL1-2a_MD LINE L1 2336 2505 -519 8 828 220 325 12 29 chr17 31917455 31917626 -63355025 + (CACCAT)n Simple_repeat Simple_repeat 6 173 0 8 828 564 65 0 0 chr17 31919654 31919731 -63352920 + (TG)n Simple_repeat Simple_repeat 2 78 0 8 828 366 335 44 83 chr17 31919846 31919990 -63352661 + MLT1D LTR MaLR 281 415 -90 8 828 432 0 0 0 chr17 31919990 31920038 -63352613 + (CA)n Simple_repeat Simple_repeat 2 49 0 8 828 366 335 44 83 chr17 31920038 31920121 -63352530 + MLT1D LTR MaLR 416 499 -6 8 828 2293 80 6 100 chr17 31920612 31920973 -63351678 + ORR1A2 LTR MaLR 1 327 0 8 828 437 233 51 8 chr17 31921127 31921244 -63351407 - RLTR12A LTR ERVK -4 564 443 8 828 755 11 0 10 chr17 31921245 31921341 -63351310 + B1_Mm SINE Alu 53 147 0 8 828 2049 180 115 38 chr17 31921341 31921785 -63350866 - RLTR12A LTR ERVK -90 478 1 8 828 1863 157 121 6 chr17 31922132 31922471 -63350180 + ORR1C1 LTR MaLR 1 378 0 8 828 2948 228 59 73 chr17 31924053 31924981 -63347670 + RMER17B LTR ERVK 1 915 -43 8 828 499 272 2 4 chr17 31926101 31926238 -63346413 + MLT1C LTR MaLR 350 467 0 8 828 267 31 0 0 chr17 31927061 31927093 -63345558 + (TC)n Simple_repeat Simple_repeat 2 33 0 8 828 270 0 0 0 chr17 31927093 31927123 -63345528 + (TG)n Simple_repeat Simple_repeat 2 31 0 8 828 336 24 0 0 chr17 31927123 31927164 -63345487 + (GA)n Simple_repeat Simple_repeat 1 41 0 8 828 1214 280 18 3 chr17 31930034 31930317 -63342334 - B4 SINE B4 -4 288 2 8 828 1265 48 0 0 chr17 31931920 31932067 -63340584 + B1_Mm SINE Alu 1 147 0 8 828 363 23 0 0 chr17 31932314 31932358 -63340293 + (TC)n Simple_repeat Simple_repeat 1 44 0 8 828 934 48 16 0 chr17 31933354 31933478 -63339173 + B1_Mus1 SINE Alu 22 147 -1 8 828 203 0 37 0 chr17 31933482 31933509 -63339142 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 8 828 704 233 63 25 chr17 31933736 31933974 -63338677 + RLTR15 LTR ERVK 45 291 -68 8 828 212 214 0 0 chr17 31935536 31935578 -63337073 + ID4_ SINE ID 1 42 -41 8 828 1633 26 5 5 chr17 31936002 31936192 -63336459 - B2_Mm1a SINE B2 -2 191 2 8 828 245 279 0 43 chr17 31936436 31936623 -63336028 + (CATA)n Simple_repeat Simple_repeat 1 179 0 9 828 272 282 14 0 chr17 31936634 31936705 -63335946 + (CA)n Simple_repeat Simple_repeat 1 72 0 9 828 1289 221 80 43 chr17 31937918 31938267 -63334384 + ORR1D2 LTR MaLR 9 370 0 9 828 550 39 26 0 chr17 31938451 31938528 -63334123 + (TG)n Simple_repeat Simple_repeat 1 79 0 9 828 500 319 83 10 chr17 31938542 31938735 -63333916 - B4A SINE B4 -14 278 72 9 828 1820 185 75 15 chr17 31939269 31939695 -63332956 + RMER16 LTR ERVK 2 533 0 9 828 222 37 0 0 chr17 31941600 31941627 -63331024 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 828 293 214 18 0 chr17 31941661 31941717 -63330934 + B4A SINE B4 230 286 -6 9 828 1162 75 0 0 chr17 31941811 31941957 -63330694 - B1_Mus1 SINE Alu -1 147 2 9 828 1205 29 0 0 chr17 31942904 31943041 -63329610 - B1_Mus2 SINE Alu -10 137 1 9 828 311 150 17 0 chr17 31943452 31943512 -63329139 + CT-rich Low_complexity Low_complexity 1 61 0 9 828 726 305 13 22 chr17 31943520 31943745 -63328906 - ID_B1 SINE B4 -1 223 1 9 828 290 266 24 60 chr17 31944050 31944134 -63328517 - LTR16E2 LTR ERVL -2 566 486 9 828 549 310 42 57 chr17 31944136 31944348 -63328303 + MLT1B LTR MaLR 2 210 -180 9 828 1435 67 17 0 chr17 31944461 31944639 -63328012 + B2_Mm2 SINE B2 1 181 -14 9 828 1053 122 0 0 chr17 31944653 31944800 -63327851 - B1_Mus1 SINE Alu 0 148 2 9 828 917 120 13 0 chr17 31944816 31944966 -63327685 + (GAAA)n Simple_repeat Simple_repeat 2 153 0 9 828 468 0 0 0 chr17 31946155 31946207 -63326444 + (CAAAA)n Simple_repeat Simple_repeat 4 55 0 9 828 274 254 112 112 chr17 31948482 31948642 -63324009 + MT2B2 LTR ERVL 105 264 -320 9 828 859 32 69 39 chr17 31948543 31948667 -63323984 + B1_Mus1 SINE Alu 10 138 -10 9 828 423 0 0 0 chr17 31948667 31948714 -63323937 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 9 828 536 0 16 0 chr17 31948965 31949029 -63323622 + (TAA)n Simple_repeat Simple_repeat 3 67 0 9 828 498 188 34 21 chr17 31949342 31949581 -63323070 + CT-rich Low_complexity Low_complexity 1 242 0 9 828 189 171 0 0 chr17 31949666 31949701 -63322950 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 828 273 300 35 35 chr17 31950232 31950346 -63322305 - MER2B DNA MER2_type -12 324 211 9 828 594 41 0 0 chr17 31951215 31951288 -63321363 + (GA)n Simple_repeat Simple_repeat 1 73 0 9 828 383 137 26 64 chr17 31952824 31952835 -63319816 - tRNA-Ala-GCY_ tRNA tRNA 0 75 66 9 828 710 23 0 11 chr17 31952835 31952924 -63319727 + (TTTC)n Simple_repeat Simple_repeat 4 91 0 9 828 383 137 26 64 chr17 31952924 31952990 -63319661 - tRNA-Ala-GCY_ tRNA tRNA -10 65 1 9 828 505 56 28 0 chr17 31952925 31952996 -63319655 - BC1_Mm scRNA scRNA -79 73 1 9 828 301 353 133 7 chr17 31953798 31954069 -63318582 - MLT1K LTR MaLR -42 553 249 9 828 201 39 0 0 chr17 31955235 31955261 -63317390 + (CAG)n Simple_repeat Simple_repeat 3 28 0 9 828 1347 199 42 100 chr17 31956066 31956445 -63316206 - MTD LTR MaLR -3 416 60 9 828 1013 70 0 7 chr17 31956816 31956959 -63315692 - B1_Mus1 SINE Alu 0 148 7 9 828 213 39 0 0 chr17 31957768 31957794 -63314857 + (CA)n Simple_repeat Simple_repeat 2 27 0 9 828 622 149 17 45 chr17 31957874 31958050 -63314601 + GA-rich Low_complexity Low_complexity 4 174 0 9 828 250 93 0 53 chr17 31958479 31958536 -63314115 + (CCCCCA)n Simple_repeat Simple_repeat 6 59 0 9 828 1096 146 5 6 chr17 31959374 31960179 -63312472 + (TGGA)n Simple_repeat Simple_repeat 1 803 0 9 828 2260 300 122 9 chr17 31961239 31962088 -63310563 - RCHARR1 DNA MER1_type -27 947 3 9 828 328 60 0 74 chr17 31963928 31963982 -63308669 - HAL1-3A_ME LINE L1 -833 2025 1976 9 828 456 19 0 0 chr17 31964093 31964146 -63308505 + (TG)n Simple_repeat Simple_repeat 1 53 0 9 828 307 316 58 6 chr17 31964949 31965105 -63307546 + MER96B DNA hAT 14 177 -240 9 828 249 300 37 24 chr17 31966003 31966085 -63306566 - MER2B DNA MER2_type -62 274 192 9 828 267 323 184 24 chr17 31966283 31966489 -63306162 - MLT2C1 LTR ERVL -158 239 1 9 828 198 167 0 0 chr17 31967443 31967479 -63305172 + G-rich Low_complexity Low_complexity 6 41 0 9 828 516 306 110 48 chr17 31967508 31967844 -63304807 - MLT1F1 LTR MaLR -82 487 131 9 828 350 281 147 30 chr17 31968076 31968286 -63304365 + MLT2B4 LTR ERVL 345 567 0 9 828 656 242 109 124 chr17 31968666 31968949 -63303702 + B4 SINE B4 2 280 -12 9 828 248 255 106 58 chr17 31969546 31969650 -63303001 - MLT1K LTR MaLR -57 538 430 9 828 1094 224 39 25 chr17 31969747 31970027 -63302624 - B4A SINE B4 -7 285 2 9 828 189 121 0 0 chr17 31970663 31970696 -63301955 + (TGGGGG)n Simple_repeat Simple_repeat 4 36 0 9 828 198 0 0 0 chr17 31971673 31971695 -63300956 + (CCCCCA)n Simple_repeat Simple_repeat 2 23 0 9 828 186 321 64 64 chr17 31971718 31971858 -63300793 + MIRb SINE MIR 46 185 -83 9 828 289 333 49 7 chr17 31974386 31974528 -63298123 - MLT1C LTR MaLR -182 285 138 9 828 181 224 119 17 chr17 31974853 31974912 -63297739 + MIRm SINE MIR 118 182 -94 9 828 254 273 107 7 chr17 31976591 31976731 -63295920 + L1MD LINE L1 3417 3570 -2576 9 828 530 309 137 16 chr17 31977306 31977687 -63294964 + L1ME1 LINE L1 5571 5997 -182 9 828 469 249 264 6 chr17 31977944 31978122 -63294529 + ID_B1 SINE B4 1 224 0 9 828 189 0 0 0 chr17 31978122 31978143 -63294508 + (GAAA)n Simple_repeat Simple_repeat 1 21 0 9 828 225 0 0 0 chr17 31979666 31979691 -63292960 + (TG)n Simple_repeat Simple_repeat 1 25 0 9 828 35 0 0 0 chr17 31981221 31981256 -63291395 + AT_rich Low_complexity Low_complexity 1 35 0 9 828 204 111 0 0 chr17 31981322 31981358 -63291293 + (A)n Simple_repeat Simple_repeat 1 36 0 9 828 237 33 0 0 chr17 31981459 31981489 -63291162 + (A)n Simple_repeat Simple_repeat 1 30 0 9 829 279 0 0 0 chr17 31985445 31985476 -63287175 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 9 829 198 0 0 0 chr17 31988384 31988406 -63284245 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 9 829 189 0 0 0 chr17 31989170 31989191 -63283460 + (T)n Simple_repeat Simple_repeat 1 21 0 9 829 783 176 42 0 chr17 31989250 31989392 -63283259 + B1F2 SINE Alu 1 148 -1 9 829 276 298 114 61 chr17 31989693 31989825 -63282826 + B1F1 SINE Alu 1 139 -10 9 829 708 35 0 0 chr17 31991516 31991603 -63281048 + (TC)n Simple_repeat Simple_repeat 1 87 0 9 829 183 129 0 0 chr17 31992692 31992723 -63279928 + (CCG)n Simple_repeat Simple_repeat 2 32 0 9 829 22 0 0 0 chr17 31992742 31992764 -63279887 + GC_rich Low_complexity Low_complexity 1 22 0 9 829 292 59 0 38 chr17 31992773 31992826 -63279825 + (CCCCG)n Simple_repeat Simple_repeat 4 54 0 9 829 209 163 47 0 chr17 31993385 31993428 -63279223 + GA-rich Low_complexity Low_complexity 2 46 0 9 829 377 297 116 86 chr17 31994498 31994903 -63277748 + RMER10A LTR ERVL 1 417 -25 9 829 333 0 0 0 chr17 31996597 31996634 -63276017 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 829 644 302 112 11 chr17 31996638 31996974 -63275677 - L1MA4 LINE L1 -1553 5920 5592 9 829 270 0 0 0 chr17 31996991 31997021 -63275630 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 9 829 651 211 307 7 chr17 31997055 31997335 -63275316 + MTD LTR MaLR 42 405 -14 9 829 271 190 96 14 chr17 31997413 31997496 -63275155 - ID4 SINE ID -60 92 3 9 829 362 312 41 79 chr17 31997938 31998211 -63274440 - MLT1A LTR MaLR -73 292 27 9 829 690 275 50 25 chr17 31998854 31999052 -63273599 + B3 SINE B2 1 203 -13 9 829 261 0 0 0 chr17 31999906 31999935 -63272716 + (TG)n Simple_repeat Simple_repeat 1 29 0 9 829 264 215 31 0 chr17 31999935 32000000 -63272651 - MTEa LTR MaLR -3 376 310 9 829 532 254 38 115 chr17 32000008 32000285 -63272366 - MTEa LTR MaLR -76 303 52 1 829 707 265 76 9 chr17 32000317 32000542 -63272109 - Tigger7 DNA MER2_type -94 2397 2158 2 829 460 288 121 12 chr17 32000650 32000815 -63271836 - Tigger7 DNA MER2_type -2302 189 7 2 829 188 32 97 0 chr17 32001482 32001513 -63271138 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 829 701 270 111 9 chr17 32003011 32003323 -63269328 + L1MB2 LINE L1 5730 6070 -110 4 829 402 264 36 18 chr17 32003363 32003475 -63269176 + PB1D10 SINE Alu 3 116 -1 5 829 810 157 82 7 chr17 32003483 32003618 -63269033 + B1_Mus1 SINE Alu 1 145 -3 6 829 951 157 0 3 chr17 32003619 32003944 -63268707 + (CCAA)n Simple_repeat Simple_repeat 1 323 0 7 829 23 78 0 0 chr17 32006085 32006136 -63266515 + AT_rich Low_complexity Low_complexity 1 51 0 8 829 305 328 44 84 chr17 32006196 32006539 -63266112 - L1M4b LINE L1 -4416 2918 2590 9 829 622 210 8 16 chr17 32006644 32006770 -63265881 - RSINE1 SINE B4 -15 150 26 1 829 1002 142 0 0 chr17 32007342 32007490 -63265161 - B1_Mur4 SINE Alu -1 149 2 1 829 250 229 114 57 chr17 32007501 32007589 -63265062 - MLT1C LTR MaLR -292 175 83 1 829 263 300 74 8 chr17 32013189 32013310 -63259341 - MLT1C LTR MaLR -6 461 333 1 829 305 323 25 65 chr17 32015545 32015744 -63256907 + MER74B LTR ERVL 73 263 -359 1 829 286 266 49 35 chr17 32015756 32015900 -63256751 + MER74B LTR ERVL 293 438 -120 1 829 594 75 0 0 chr17 32016028 32016108 -63256543 + (CA)n Simple_repeat Simple_repeat 1 80 0 1 829 359 247 23 12 chr17 32016114 32016200 -63256451 + PB1D10 SINE Alu 29 115 -2 1 829 351 282 67 7 chr17 32017976 32018126 -63254525 - MLT1C LTR MaLR -256 211 53 1 829 2468 51 36 60 chr17 32018148 32018483 -63254168 + ORR1A2 LTR MaLR 1 327 0 1 829 445 241 8 8 chr17 32019268 32019400 -63253251 + L1VL1 LINE L1 145 276 -6142 1 829 30708 96 15 5 chr17 32019392 32025360 -63247291 + L1_Mus2 LINE L1 536 6566 0 2 829 396 0 0 0 chr17 32028470 32028514 -63244137 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 829 404 313 39 35 chr17 32028918 32029173 -63243478 + L1MC2 LINE L1 5864 6119 -225 2 829 421 248 35 21 chr17 32029185 32029329 -63243322 + L1MC2 LINE L1 6196 6341 -3 2 829 823 181 0 19 chr17 32029355 32029616 -63243035 + GA-rich Low_complexity Low_complexity 1 255 0 2 829 307 328 50 50 chr17 32030930 32031071 -63241580 + Lx5 LINE L1 6893 7033 -17 2 829 979 130 6 6 chr17 32031076 32031246 -63241405 + (GAAA)n Simple_repeat Simple_repeat 3 172 0 2 829 242 180 180 0 chr17 32031264 32031325 -63241326 + B3A SINE B2 92 163 -35 2 829 910 195 0 0 chr17 32031348 32031497 -63241154 + B1_Mur3 SINE Alu 1 149 0 2 829 528 264 12 35 chr17 32031759 32031928 -63240723 + HAL1-2a_MD LINE L1 2343 2507 -517 2 829 267 263 40 0 chr17 32031973 32032049 -63240602 + L1MC5 LINE L1 7364 7442 -519 2 829 461 315 36 98 chr17 32032747 32032837 -63239814 + ID_B1 SINE B4 14 224 0 3 829 770 156 52 0 chr17 32032837 32032972 -63239679 + B1_Mur4 SINE Alu 9 150 0 3 829 647 235 21 96 chr17 32032987 32033175 -63239476 + B4 SINE B4 119 292 0 3 829 381 263 11 6 chr17 32033175 32033351 -63239300 + (CA)n Simple_repeat Simple_repeat 1 177 0 3 829 202 254 0 35 chr17 32034799 32034856 -63237795 + C-rich Low_complexity Low_complexity 1 55 0 3 829 345 122 40 0 chr17 32035512 32035586 -63237065 + GA-rich Low_complexity Low_complexity 4 80 0 3 829 382 233 11 53 chr17 32035688 32035783 -63236868 + MTE2b LTR MaLR 19 109 -270 3 829 674 264 5 97 chr17 32035795 32036001 -63236650 + MTE2b LTR MaLR 188 374 -5 3 829 277 294 99 35 chr17 32036078 32036291 -63236360 + L1MC1 LINE L1 6064 6306 -38 3 829 260 276 102 70 chr17 32036728 32036990 -63235661 - MTEa LTR MaLR -7 372 103 3 829 740 341 52 13 chr17 32037232 32037541 -63235110 - MTE-int LTR MaLR -463 1117 797 3 829 753 230 1 1 chr17 32037647 32038302 -63234349 + (CA)n Simple_repeat Simple_repeat 1 655 0 4 829 525 71 0 0 chr17 32039170 32039240 -63233411 + (GA)n Simple_repeat Simple_repeat 1 70 0 4 829 614 104 0 10 chr17 32039487 32039584 -63233067 + (TCC)n Simple_repeat Simple_repeat 1 96 0 4 829 456 194 0 0 chr17 32039987 32040095 -63232556 + ORR1A1 LTR MaLR 1 108 -238 4 829 378 148 0 0 chr17 32040093 32040154 -63232497 + ORR1A2 LTR MaLR 47 107 -220 4 829 429 209 15 55 chr17 32040143 32040345 -63232306 + RMER17C LTR ERVK 86 279 -131 4 829 1505 52 66 0 chr17 32040377 32040589 -63232062 + ORR1A2 LTR MaLR 94 319 -8 4 829 234 0 0 0 chr17 32041355 32041381 -63231270 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 829 924 114 0 0 chr17 32041643 32041783 -63230868 + (GGAA)n Simple_repeat Simple_repeat 4 143 0 4 829 2895 97 26 0 chr17 32042077 32042467 -63230184 - MTB LTR MaLR 0 400 1 4 829 556 322 70 9 chr17 32043646 32043875 -63228776 + B4A SINE B4 8 250 -42 5 829 574 271 48 34 chr17 32045481 32045687 -63226964 - MLT1A0 LTR MaLR -155 210 2 5 829 523 215 12 0 chr17 32047006 32047178 -63225473 + (TCCA)n Simple_repeat Simple_repeat 2 175 0 5 829 1078 96 0 0 chr17 32047259 32047395 -63225256 + B1_Mus2 SINE Alu 2 137 -10 5 829 398 308 39 0 chr17 32047422 32047526 -63225125 + PB1D10 SINE Alu 1 108 -9 5 829 790 159 65 0 chr17 32048137 32048275 -63224376 - B1_Mur1 SINE Alu -1 148 2 5 829 802 158 21 21 chr17 32048411 32048553 -63224098 + B1_Mur3 SINE Alu 1 142 -7 5 829 22 0 0 0 chr17 32048562 32048584 -63224067 + AT_rich Low_complexity Low_complexity 1 22 0 5 829 352 82 0 32 chr17 32048584 32048647 -63224004 + (GGAA)n Simple_repeat Simple_repeat 3 63 0 5 829 359 331 125 11 chr17 32048650 32048922 -63223729 + L1MB5 LINE L1 5703 6005 -169 5 829 385 290 403 29 chr17 32048954 32049155 -63223496 + B4A SINE B4 2 277 -15 6 829 432 0 0 0 chr17 32049186 32049234 -63223417 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 829 639 265 143 28 chr17 32050707 32050959 -63221692 - B4 SINE B4 -10 282 2 6 829 2797 128 37 5 chr17 32051523 32051931 -63220720 - MTC LTR MaLR 0 421 1 6 829 580 125 0 0 chr17 32051985 32052073 -63220578 - B1_Mus1 SINE Alu -58 90 3 6 829 357 183 0 99 chr17 32051992 32052083 -63220568 - MT2B LTR ERVL -362 239 158 6 829 189 0 0 0 chr17 32052434 32052455 -63220196 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 829 294 106 0 0 chr17 32052547 32052594 -63220057 + (TG)n Simple_repeat Simple_repeat 1 47 0 6 829 202 205 0 0 chr17 32053227 32053266 -63219385 + C-rich Low_complexity Low_complexity 4 42 0 6 829 418 314 107 5 chr17 32054038 32054243 -63218408 + L1MB3 LINE L1 4305 4530 -1610 6 829 397 233 23 0 chr17 32054243 32054329 -63218322 - PB1D10 SINE Alu -7 110 23 7 829 260 309 0 10 chr17 32054334 32054432 -63218219 + L1MD LINE L1 4528 4624 -1522 7 829 682 306 94 68 chr17 32054457 32055229 -63217422 + L1MB3 LINE L1 5288 6087 -96 6 829 306 148 0 0 chr17 32058695 32058749 -63213902 + (TCCCC)n Simple_repeat Simple_repeat 1 54 0 7 829 352 272 102 75 chr17 32059463 32059729 -63212922 - MLT1B LTR MaLR -17 450 178 7 829 573 55 0 0 chr17 32059736 32059809 -63212842 + (TC)n Simple_repeat Simple_repeat 2 74 0 7 829 315 0 0 0 chr17 32059809 32059843 -63212808 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 829 338 271 321 72 chr17 32059887 32060108 -63212543 - B4A SINE B4 -16 276 1 7 829 377 311 29 75 chr17 32060130 32060304 -63212347 - MLT1B LTR MaLR -224 166 1 7 829 805 267 62 5 chr17 32061156 32061348 -63211303 - ID_B1 SINE B4 -17 207 5 7 829 339 292 10 0 chr17 32061555 32061651 -63211000 - PB1D10 SINE Alu 0 117 21 7 829 1368 79 16 11 chr17 32062029 32062220 -63210431 + B2_Mm1t SINE B2 2 193 0 7 829 278 356 66 36 chr17 32062713 32062879 -63209772 - ORR1E LTR MaLR -112 247 77 8 829 450 0 0 0 chr17 32063133 32063183 -63209468 + (TG)n Simple_repeat Simple_repeat 1 50 0 8 829 1089 211 57 33 chr17 32063199 32063444 -63209207 - B4A SINE B4 -35 257 7 8 829 302 211 255 31 chr17 32063840 32063938 -63208713 - PB1D9 SINE Alu 0 120 1 8 829 366 291 75 6 chr17 32064072 32064245 -63208406 - L1M5 LINE L1 -1464 4682 4498 8 829 971 158 29 3 chr17 32064250 32064591 -63208060 + (TCTA)n Simple_repeat Simple_repeat 1 349 0 8 829 633 252 61 0 chr17 32064621 32064752 -63207899 - RSINE1 SINE B4 -19 146 8 8 829 364 351 159 25 chr17 32064757 32065152 -63207499 - L1MD LINE L1 -1637 4509 4062 8 829 857 298 57 27 chr17 32065152 32065533 -63207118 + MLT1C LTR MaLR 1 382 -8 8 829 836 249 114 45 chr17 32065564 32065854 -63206797 - MTEb LTR MaLR -17 362 53 8 829 1184 68 0 0 chr17 32067730 32067877 -63204774 - B1_Mus2 SINE Alu 0 147 1 9 829 1517 183 129 124 chr17 32069998 32070206 -63202445 + MTC LTR MaLR 1 211 -210 9 829 1215 56 0 0 chr17 32070206 32070348 -63202303 + B1_Mus1 SINE Alu 2 143 -5 9 829 1517 183 129 124 chr17 32070348 32070558 -63202093 + MTC LTR MaLR 212 421 0 9 829 257 329 77 24 chr17 32070647 32070815 -63201836 + L1MB3 LINE L1 6004 6180 -3 9 829 551 294 124 0 chr17 32071159 32071312 -63201339 - B3A SINE B2 -25 173 2 9 829 364 159 0 0 chr17 32071345 32071414 -63201237 - Lx9 LINE L1 -7 7637 7569 9 829 675 123 19 0 chr17 32071422 32071528 -63201123 - Lx9 LINE L1 -167 7477 7370 9 829 231 289 0 0 chr17 32071522 32071574 -63201077 - Lx8 LINE L1 -467 7006 6955 9 829 375 258 69 40 chr17 32071579 32071680 -63200971 - B1F SINE Alu -7 142 39 9 829 270 283 98 29 chr17 32073365 32073467 -63199184 + ID_B1 SINE B4 112 220 -4 9 829 288 329 0 0 chr17 32073476 32073558 -63199093 + ID2 SINE ID 2 83 0 9 829 561 271 57 74 chr17 32074801 32075084 -63197567 + B4 SINE B4 1 278 -14 1 829 244 335 82 46 chr17 32075866 32076060 -63196591 - LTR16E2 LTR ERVL -5 563 363 1 829 377 39 20 0 chr17 32078701 32078752 -63193899 + (GA)n Simple_repeat Simple_repeat 2 53 0 1 829 252 356 112 21 chr17 32079273 32079324 -63193327 + L1MB3 LINE L1 4920 4980 -1166 1 829 446 288 59 8 chr17 32079324 32079443 -63193208 + PB1 SINE Alu 1 125 -2 1 829 252 356 112 21 chr17 32079443 32079818 -63192833 + L1MB3 LINE L1 4981 5385 -761 1 829 796 326 44 22 chr17 32079976 32080246 -63192405 + B4A SINE B4 14 289 -3 1 829 658 252 112 13 chr17 32080291 32080564 -63192087 + L1MB3 LINE L1 5592 5891 -283 1 829 22 0 0 0 chr17 32081719 32081741 -63190910 + AT_rich Low_complexity Low_complexity 1 22 0 1 829 468 0 0 0 chr17 32082057 32082109 -63190542 + (TTTTG)n Simple_repeat Simple_repeat 4 55 0 1 829 571 144 270 0 chr17 32082110 32082221 -63190430 - B1_Mur4 SINE Alu -9 141 1 1 829 1217 147 37 0 chr17 32083964 32084154 -63188497 + B3 SINE B2 20 216 0 1 829 369 327 70 73 chr17 32084205 32084492 -63188159 + ORR1E LTR MaLR 21 306 -53 1 829 1569 198 73 17 chr17 32084675 32085029 -63187622 - ORR1D1 LTR MaLR 0 374 1 1 829 385 264 114 23 chr17 32085691 32085823 -63186828 + B1F SINE Alu 5 148 -1 1 829 431 258 122 54 chr17 32085863 32086199 -63186452 + L1M5 LINE L1 3180 3538 -2608 1 829 238 295 16 0 chr17 32086219 32086280 -63186371 + ZP3AR Satellite Satellite 21 82 -130 1 829 532 108 60 0 chr17 32086240 32086323 -63186328 + BC1_Mm scRNA scRNA 1 88 -64 1 829 700 258 22 38 chr17 32086339 32086524 -63186127 + B3A SINE B2 1 182 -16 1 829 517 315 111 55 chr17 32086552 32086636 -63186015 + L1MD LINE L1 3595 3677 -2469 1 829 1056 66 81 0 chr17 32086636 32086772 -63185879 + B1_Mus2 SINE Alu 1 147 0 1 829 517 315 111 55 chr17 32086772 32087399 -63185252 + L1MD LINE L1 3678 4346 -1800 1 829 338 303 44 55 chr17 32088466 32088654 -63183997 - ORR1E LTR MaLR -149 210 20 1 829 311 253 0 0 chr17 32088695 32088778 -63183873 + L1M5 LINE L1 4552 4634 -1512 1 829 942 232 55 20 chr17 32088782 32088984 -63183667 + B3 SINE B2 2 210 -6 1 829 381 72 28 28 chr17 32089000 32089071 -63183580 + (CATA)n Simple_repeat Simple_repeat 4 74 0 1 829 336 270 155 46 chr17 32089072 32089266 -63183385 + L1M5 LINE L1 4619 4833 -1313 1 829 258 32 0 0 chr17 32089931 32089962 -63182689 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 829 779 172 0 58 chr17 32090310 32090464 -63182187 + B4A SINE B4 86 230 -62 1 829 207 0 0 0 chr17 32090521 32090544 -63182107 + (TAG)n Simple_repeat Simple_repeat 1 23 0 1 829 330 304 140 7 chr17 32090577 32090713 -63181938 + HAL1 LINE L1 2057 2210 -297 1 829 315 0 0 0 chr17 32091349 32091384 -63181267 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 829 2020 116 9 51 chr17 32091899 32092235 -63180416 + RLTRETN_Mm LTR ERVK 1 322 0 1 829 24263 49 8 20 chr17 32092236 32095714 -63176937 + MMETn-int LTR ERVK 2 4693 -2713 1 829 8634 116 18 33 chr17 32095758 32097178 -63175473 + ETnERV-int LTR ERVK 1658 3055 -259 1 829 243 314 98 49 chr17 32097179 32097383 -63175268 + RLTR13A2 LTR ERVK 277 490 -468 1 829 792 133 7 15 chr17 32097383 32097520 -63175131 + MMETn-int LTR ERVK 4709 4844 0 1 829 2086 107 12 51 chr17 32097520 32097855 -63174796 + RLTRETN_Mm LTR ERVK 1 322 0 1 829 400 300 69 28 chr17 32098634 32098850 -63173801 + L1MCb LINE L1 570 794 -5251 1 829 1303 112 27 0 chr17 32098983 32099170 -63173481 + B2_Mm1t SINE B2 1 192 -1 1 829 21 0 0 0 chr17 32099195 32099216 -63173435 + AT_rich Low_complexity Low_complexity 1 21 0 1 829 360 214 17 104 chr17 32099611 32099658 -63172993 + L1MCb LINE L1 933 978 -5067 1 829 951 232 23 19 chr17 32099658 32099873 -63172778 + B3 SINE B2 1 216 0 1 829 360 214 17 104 chr17 32099873 32099940 -63172711 + L1MCb LINE L1 979 1037 -5008 1 829 979 227 195 0 chr17 32099976 32100289 -63172362 - MLT1B LTR MaLR -16 374 1 1 829 247 265 81 35 chr17 32100410 32100496 -63172155 - MTEb LTR MaLR -11 368 279 1 829 4528 147 33 20 chr17 32100818 32100899 -63171752 - L1_Mur2 LINE L1 -514 5363 5298 1 829 1495 64 37 0 chr17 32100899 32101087 -63171564 - B2_Mm2 SINE B2 0 195 1 1 829 4528 147 33 20 chr17 32101087 32101852 -63170799 - L1_Mur2 LINE L1 -580 5297 4506 1 829 2797 150 44 72 chr17 32101849 32102418 -63170233 + Lx5 LINE L1 6498 7050 0 1 829 385 254 154 28 chr17 32103777 32103959 -63168692 + L1MCb LINE L1 1216 1420 -5147 1 829 279 369 10 0 chr17 32103965 32104068 -63168583 + B4 SINE B4 2 105 -187 1 829 263 355 8 8 chr17 32104422 32104544 -63168107 + L1MCb LINE L1 1866 1987 -4673 1 829 2374 184 52 9 chr17 32104824 32105263 -63167388 + MT2A LTR ERVL 1 458 -75 1 829 531 0 0 0 chr17 32105263 32105322 -63167329 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 829 304 342 42 0 chr17 32105633 32105753 -63166898 - L1ME3 LINE L1 -127 6035 5911 1 829 379 374 50 41 chr17 32105757 32106100 -63166551 - ORR1E LTR MaLR 0 359 14 1 829 2676 299 175 27 chr17 32106106 32107437 -63165214 - ORR1E-int LTR MaLR -52 1528 1 1 829 568 348 112 16 chr17 32107437 32107739 -63164912 - ORR1E LTR MaLR -8 351 21 1 829 201 74 0 0 chr17 32108323 32108350 -63164301 + (A)n Simple_repeat Simple_repeat 1 27 0 1 829 298 164 16 32 chr17 32108429 32108492 -63164159 + B3A SINE B2 1 62 -136 1 829 562 265 130 7 chr17 32108557 32108843 -63163808 + L1_Rod LINE L1 5413 5720 -127 1 829 624 264 19 19 chr17 32108843 32109001 -63163650 + RSINE1 SINE B4 2 159 -6 1 829 30 69 0 0 chr17 32109008 32109066 -63163585 + AT_rich Low_complexity Low_complexity 1 58 0 1 829 1116 98 92 0 chr17 32109164 32109328 -63163323 + B2_Mm2 SINE B2 1 179 -16 1 829 528 16 0 0 chr17 32109328 32109389 -63163262 + (GA)n Simple_repeat Simple_repeat 1 61 0 1 829 681 76 0 0 chr17 32109395 32109500 -63163151 + (CAAG)n Simple_repeat Simple_repeat 2 106 0 1 829 497 16 16 0 chr17 32109946 32110008 -63162643 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 829 799 232 97 55 chr17 32111257 32111550 -63161101 + MTE2b LTR MaLR 97 379 0 1 829 1783 100 117 75 chr17 32111745 32112079 -63160572 + ORR1B1 LTR MaLR 47 394 0 1 829 351 294 101 0 chr17 32112155 32112264 -63160387 + PB1 SINE Alu 1 120 -7 1 829 285 211 84 0 chr17 32112287 32112358 -63160293 + ID4_ SINE ID 7 83 0 1 103 1460 204 79 25 chr17 32112408 32112761 -63159890 + ORR1D1 LTR MaLR 1 372 -2 1 830 798 292 115 14 chr17 32112825 32113309 -63159342 + L1MD LINE L1 2349 2902 -3244 1 830 261 286 15 60 chr17 32114247 32114381 -63158270 + RSINE1 SINE B4 38 165 0 1 830 931 268 116 18 chr17 32114425 32114752 -63157899 - MTEa LTR MaLR -20 359 1 1 830 643 250 0 0 chr17 32114752 32114879 -63157772 - B3 SINE B2 -88 128 2 1 830 4016 226 99 36 chr17 32115048 32116290 -63156361 - RMER1A Other Other -3 1027 2 1 830 424 204 124 11 chr17 32116629 32116718 -63155933 + RSINE1 SINE B4 24 122 -43 1 830 301 391 28 22 chr17 32116874 32117052 -63155599 - L1M5 LINE L1 -3321 2825 2647 1 830 387 281 139 58 chr17 32117387 32117691 -63154960 + MTEb LTR MaLR 24 379 0 1 830 401 250 21 10 chr17 32117861 32117958 -63154693 - B3 SINE B2 0 216 119 1 830 1811 201 77 29 chr17 32117958 32118440 -63154211 + Lx9 LINE L1 7137 7641 -3 1 830 347 300 180 12 chr17 32118774 32118946 -63153705 - MLT2B4 LTR ERVL -348 208 8 1 830 417 350 93 23 chr17 32119457 32119802 -63152849 - L2 LINE L2 -705 2714 2346 1 830 853 169 0 29 chr17 32121103 32121243 -63151408 + B1_Mur3 SINE Alu 1 136 -13 1 830 357 316 233 4 chr17 32121899 32122176 -63150475 - LTR40b LTR ERVL -7 455 116 1 830 264 326 30 44 chr17 32122179 32122314 -63150337 - LTR40b LTR ERVL -308 154 22 1 830 341 240 154 22 chr17 32122325 32122530 -63150121 + L1M4 LINE L1 4520 4744 -1402 1 830 1795 214 32 36 chr17 32122557 32122999 -63149652 + RMER10A LTR ERVL 3 442 0 1 830 446 259 58 17 chr17 32123131 32123304 -63149347 + L1M4 LINE L1 5574 5753 -426 1 830 334 235 137 17 chr17 32123457 32123574 -63149077 + L1MA10 LINE L1 6204 6334 0 1 830 1395 172 143 12 chr17 32124775 32124982 -63147669 + ORR1D1 LTR MaLR 3 243 -131 1 830 387 0 0 0 chr17 32124982 32125025 -63147626 + (CCTG)n Simple_repeat Simple_repeat 4 46 0 1 830 1395 172 143 12 chr17 32125025 32125146 -63147505 + ORR1D1 LTR MaLR 244 374 0 1 830 3659 268 202 16 chr17 32125160 32125679 -63146972 + ORR1D1-int LTR MaLR 18 745 -835 1 830 279 0 0 0 chr17 32125679 32125710 -63146941 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 830 3659 214 90 16 chr17 32125710 32126385 -63146266 + ORR1D1-int LTR MaLR 642 1526 -54 1 830 1552 192 65 96 chr17 32126385 32126579 -63146072 + ORR1D1 LTR MaLR 1 198 -176 1 830 1120 43 65 0 chr17 32126579 32126717 -63145934 + B1_Mm SINE Alu 1 147 0 1 830 1552 192 65 96 chr17 32126717 32126908 -63145743 + ORR1D1 LTR MaLR 199 374 0 1 830 605 310 60 72 chr17 32127184 32127488 -63145163 + B4 SINE B4 9 292 0 1 830 215 189 54 54 chr17 32127565 32127621 -63145030 + ID2 SINE ID 4 59 -24 1 830 1310 20 0 0 chr17 32128043 32128189 -63144462 + B1_Mus2 SINE Alu 2 147 0 1 830 189 0 0 0 chr17 32128456 32128477 -63144174 + (A)n Simple_repeat Simple_repeat 1 21 0 1 830 533 235 10 10 chr17 32128477 32128580 -63144071 - B1_Mur1 SINE Alu -13 136 34 1 830 180 77 0 0 chr17 32128652 32128678 -63143973 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 830 322 253 48 48 chr17 32128688 32128771 -63143880 + B4 SINE B4 3 85 -207 1 830 293 234 30 30 chr17 32128784 32128850 -63143801 + B4A SINE B4 227 292 0 1 830 1418 217 214 3 chr17 32128913 32129301 -63143350 - RMER19A LTR ERVK 0 737 268 1 830 240 259 0 105 chr17 32129300 32129395 -63143256 + B3A SINE B2 114 198 0 1 830 362 316 69 45 chr17 32129436 32129638 -63143013 + HAL1b LINE L1 715 921 -1088 1 830 456 257 39 10 chr17 32129771 32129873 -63142778 + B4A SINE B4 2 106 -186 1 830 2277 166 73 75 chr17 32130101 32130591 -63142060 + RMER15 LTR ERVL 30 518 -57 1 830 492 316 90 84 chr17 32130853 32131060 -63141591 + L1MEe LINE L1 1546 1749 -4485 1 830 629 58 0 11 chr17 32131060 32131147 -63141504 + (GGAAA)n Simple_repeat Simple_repeat 3 88 0 1 830 492 313 114 60 chr17 32131147 32131753 -63140898 + L1MEe LINE L1 1750 2389 -3826 1 830 700 268 0 48 chr17 32131838 32132003 -63140648 + RSINE1 SINE B4 9 165 0 1 830 243 237 61 20 chr17 32132284 32132383 -63140268 + B3 SINE B2 5 107 -109 1 830 1414 18 107 0 chr17 32132479 32132647 -63140004 + B2_Mm1a SINE B2 2 187 -6 1 830 236 170 19 19 chr17 32133147 32133201 -63139450 + RMER2 LTR ERV1 487 540 -27 1 830 32 0 0 0 chr17 32133868 32133900 -63138751 + AT_rich Low_complexity Low_complexity 1 32 0 1 830 2111 189 35 17 chr17 32134324 32134729 -63137922 - MTD LTR MaLR -5 414 3 1 830 229 206 45 60 chr17 32136229 32136296 -63136355 - ID4 SINE ID -16 67 2 2 830 370 327 56 25 chr17 32136514 32136648 -63136003 + ORR1A2 LTR MaLR 1 139 -220 2 830 2321 86 3 33 chr17 32136648 32136975 -63135676 + ORR1A2 LTR MaLR 1 319 -8 2 830 13231 48 18 86 chr17 32136975 32138896 -63133755 + ORR1A1-int LTR MaLR 3 1792 0 2 830 2714 31 64 9 chr17 32138896 32139224 -63133427 + ORR1A1 LTR MaLR 1 346 0 2 830 581 266 82 39 chr17 32139886 32140093 -63132558 - ID_B1 SINE B4 -4 220 5 2 830 482 226 341 19 chr17 32140360 32140568 -63132083 + RMER15 LTR ERVL 301 575 0 2 830 753 277 59 5 chr17 32140568 32140771 -63131880 + MTE-int LTR MaLR 262 475 -1105 2 830 903 195 53 21 chr17 32140768 32140957 -63131694 - ORR1D1 LTR MaLR -179 195 1 2 830 288 281 43 14 chr17 32141723 32141864 -63130787 + L1M5 LINE L1 5622 5766 -474 2 830 411 239 82 21 chr17 32142658 32142825 -63129826 + L1MEf LINE L1 892 1074 -5428 2 830 424 286 23 149 chr17 32142986 32143200 -63129451 + MLT1E2 LTR MaLR 15 201 -426 2 830 731 202 141 0 chr17 32143227 32143390 -63129261 + MTEa LTR MaLR 1 186 -193 2 830 1215 54 7 0 chr17 32143439 32143586 -63129065 + B1_Mus1 SINE Alu 1 148 0 2 830 353 308 76 9 chr17 32143601 32143706 -63128945 + RSINE1 SINE B4 44 155 -10 2 830 876 197 96 20 chr17 32143763 32143960 -63128691 + MTEa LTR MaLR 168 379 0 2 830 367 198 22 65 chr17 32144390 32144482 -63128169 + PB1D10 SINE Alu 30 117 0 2 830 298 146 0 0 chr17 32145829 32145877 -63126774 + B3A SINE B2 1 48 -150 2 830 1939 123 93 39 chr17 32145974 32146338 -63126313 + ORR1C2 LTR MaLR 1 384 0 2 830 343 145 32 16 chr17 32147262 32147325 -63125326 + ORR1C1 LTR MaLR 275 338 -40 2 830 1424 65 11 0 chr17 32147326 32147510 -63125141 + B2_Mm1t SINE B2 2 187 -6 2 830 1556 238 76 32 chr17 32148399 32148873 -63123778 + Lx8 LINE L1 6863 7357 -116 2 830 758 171 36 0 chr17 32149642 32149782 -63122869 - B1_Mur3 SINE Alu 0 149 5 2 830 1338 169 5 5 chr17 32150973 32151193 -63121458 + URR1B DNA MER1_type 1 220 -5 2 830 387 205 0 0 chr17 32151569 32151647 -63121004 + ID4 SINE ID 2 79 -4 2 830 1069 207 24 19 chr17 32151829 32152041 -63120610 + B3 SINE B2 1 213 -3 2 830 431 267 40 68 chr17 32152069 32152246 -63120405 + RLTR42-int LTR ERVK 1228 1399 -4123 2 830 277 316 20 0 chr17 32152766 32152864 -63119787 - B4 SINE B4 -191 101 2 2 830 555 277 152 0 chr17 32152871 32153048 -63119603 + MER2 DNA MER2_type 142 345 0 2 830 305 253 43 21 chr17 32153109 32153202 -63119449 + Lx8 LINE L1 6503 6597 -876 2 830 1075 109 0 7 chr17 32153203 32153351 -63119300 + B1_Mm SINE Alu 1 147 0 2 830 225 94 0 0 chr17 32154188 32154220 -63118431 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 830 377 245 28 28 chr17 32154221 32154330 -63118321 + B3 SINE B2 97 205 -11 2 830 304 307 50 28 chr17 32154515 32154656 -63117995 + B1F SINE Alu 1 144 -5 2 830 531 108 5 112 chr17 32154671 32154868 -63117783 + (CAGAGA)n Simple_repeat Simple_repeat 5 180 0 2 830 203 0 0 36 chr17 32154887 32154915 -63117736 + (CAGGA)n Simple_repeat Simple_repeat 3 29 0 2 830 534 54 0 0 chr17 32154925 32154999 -63117652 + (GGAGA)n Simple_repeat Simple_repeat 1 74 0 2 830 345 245 90 81 chr17 32155693 32155804 -63116847 - PB1D10 SINE Alu -1 116 5 2 830 633 252 65 0 chr17 32155706 32155845 -63116806 - ID_B1 SINE B4 -33 191 44 2 830 649 299 65 85 chr17 32155914 32156301 -63116350 - MTEa LTR MaLR 0 379 1 2 830 918 291 111 70 chr17 32156305 32156933 -63115718 - MTEa-int LTR MaLR -4 1576 882 2 830 407 241 18 27 chr17 32157028 32157139 -63115512 - MTEa-int LTR MaLR -1347 233 124 2 830 235 305 0 0 chr17 32157210 32157269 -63115382 + ID4 SINE ID 12 70 -13 2 830 552 132 0 10 chr17 32157251 32157353 -63115298 - B1F2 SINE Alu -34 115 21 2 830 269 240 26 145 chr17 32157353 32157367 -63115284 - MT2B LTR ERVL -331 269 168 2 830 395 302 212 26 chr17 32157386 32157617 -63115034 - MTE2a-int LTR MaLR -945 635 362 2 830 1615 255 20 26 chr17 32157617 32158109 -63114542 + Lx9 LINE L1 7126 7614 -30 2 830 1021 294 74 11 chr17 32158109 32158477 -63114174 - MTE2a-int LTR MaLR -1285 450 2 2 830 258 243 71 0 chr17 32158498 32158568 -63114083 - MTE2a LTR MaLR -14 365 291 2 830 561 194 7 0 chr17 32158588 32158687 -63113964 - B1_Mus1 SINE Alu -22 127 23 2 830 1208 113 32 0 chr17 32158760 32158946 -63113705 + B2_Mm2 SINE B2 1 192 -3 2 830 416 196 45 25 chr17 32159165 32159279 -63113372 - B1_Mur3 SINE Alu -28 119 1 2 830 21 0 0 0 chr17 32159288 32159309 -63113342 + AT_rich Low_complexity Low_complexity 1 21 0 2 830 270 261 193 0 chr17 32159310 32159398 -63113253 + RSINE1 SINE B4 2 106 -59 2 830 374 302 10 0 chr17 32160889 32160985 -63111666 - Lx8 LINE L1 -201 7272 7176 2 830 619 232 151 0 chr17 32161027 32161212 -63111439 + B3 SINE B2 4 216 0 2 830 1104 204 24 10 chr17 32161215 32161423 -63111228 - B3 SINE B2 -4 212 2 2 830 211 301 67 27 chr17 32162576 32162651 -63110000 + L2a LINE L2 3317 3394 -32 2 830 905 147 7 0 chr17 32162752 32162888 -63109763 + B1_Mur4 SINE Alu 1 137 -13 2 830 583 211 36 24 chr17 32162929 32163059 -63109592 + B1_Mur2 SINE Alu 2 128 -21 2 830 247 190 0 33 chr17 32163377 32163437 -63109214 - B1F SINE Alu -88 61 4 2 830 262 100 16 16 chr17 32163478 32163539 -63109112 + (TTTTTG)n Simple_repeat Simple_repeat 1 61 0 2 830 708 288 35 0 chr17 32164929 32165099 -63107552 + 7SK RNA RNA 59 234 -97 2 830 555 224 139 26 chr17 32166025 32166176 -63106475 + B3 SINE B2 40 207 -9 2 830 533 150 10 29 chr17 32166334 32166437 -63106214 + B1_Mur2 SINE Alu 49 149 0 2 830 1210 89 0 0 chr17 32166793 32166950 -63105701 + B2_Mm2 SINE B2 1 157 -38 2 830 261 0 0 0 chr17 32166950 32166979 -63105672 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 2 830 303 200 92 0 chr17 32166989 32167054 -63105597 + MT2B LTR ERVL 169 239 -362 2 830 676 32 97 0 chr17 32166997 32167090 -63105561 + B1_Mus1 SINE Alu 27 128 -20 2 830 935 274 181 2 chr17 32167222 32167625 -63105026 + LTR65 LTR ERV1 6 480 -189 2 830 363 314 25 0 chr17 32167620 32167738 -63104913 + B1F SINE Alu 26 146 -3 2 830 272 309 31 10 chr17 32167786 32167884 -63104767 + LTR65 LTR ERV1 551 650 -19 2 830 1184 161 4 59 chr17 32168106 32168344 -63104307 + URR1B DNA MER1_type 1 225 0 2 830 1129 43 0 0 chr17 32169136 32169276 -63103375 - B1_Mus2 SINE Alu -6 141 2 2 830 253 217 0 0 chr17 32169340 32169386 -63103265 - B3 SINE B2 -86 130 85 2 830 524 271 8 0 chr17 32169586 32169708 -63102943 - ID_B1 SINE B4 -20 204 82 2 830 198 0 0 0 chr17 32169839 32169861 -63102790 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 2 830 297 0 0 0 chr17 32170539 32170572 -63102079 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 830 325 189 208 24 chr17 32170578 32170703 -63101948 - B1F2 SINE Alu 0 149 2 2 830 379 283 26 34 chr17 32170795 32170912 -63101739 + PB1 SINE Alu 9 124 -3 2 830 244 232 189 0 chr17 32171783 32171878 -63100773 + ID_B1 SINE B4 112 224 0 2 830 1017 134 73 0 chr17 32172018 32172197 -63100454 + MTC LTR MaLR 1 192 -229 2 830 707 44 0 0 chr17 32172196 32172287 -63100364 + B1_Mm SINE Alu 56 146 -1 2 830 791 196 13 6 chr17 32172299 32172458 -63100193 + MTC LTR MaLR 196 355 -66 2 830 22 0 0 0 chr17 32174205 32174227 -63098424 + GC_rich Low_complexity Low_complexity 1 22 0 2 830 316 256 24 0 chr17 32174295 32174377 -63098274 + B3 SINE B2 127 210 -6 2 830 477 50 0 0 chr17 32174549 32174609 -63098042 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 830 304 272 21 32 chr17 32174645 32174740 -63097911 - RSINE1 SINE B4 -67 98 5 2 830 709 151 87 0 chr17 32175040 32175166 -63097485 - B1_Mur4 SINE Alu -13 137 1 2 830 505 127 167 35 chr17 32175181 32175295 -63097356 - B1_Mur4 SINE Alu 0 150 22 2 830 329 180 340 0 chr17 32176047 32176147 -63096504 + B3 SINE B2 1 134 -82 2 830 204 125 0 0 chr17 32176147 32176179 -63096472 + (T)n Simple_repeat Simple_repeat 1 32 0 2 830 262 281 24 0 chr17 32176200 32176282 -63096369 + GA-rich Low_complexity Low_complexity 2 85 0 2 830 279 276 48 67 chr17 32176285 32176390 -63096261 + B3 SINE B2 113 215 -1 2 830 335 292 67 0 chr17 32176395 32176484 -63096167 + B4A SINE B4 1 95 -197 2 830 658 184 260 6 chr17 32176638 32176807 -63095844 + B3 SINE B2 5 216 0 2 830 192 163 98 39 chr17 32177071 32177122 -63095529 - L2a LINE L2 -49 3377 3324 2 830 996 50 40 47 chr17 32177204 32177352 -63095299 - B1_Mus1 SINE Alu 0 148 2 2 830 280 313 104 45 chr17 32177417 32177571 -63095080 - RSINE1 SINE B4 -1 164 2 2 830 259 280 53 99 chr17 32177927 32178058 -63094593 + MT2B LTR ERVL 152 276 -325 2 830 682 186 15 15 chr17 32177949 32178085 -63094566 + B1_Mur1 SINE Alu 14 149 0 2 830 351 211 147 0 chr17 32178094 32178189 -63094462 + PB1D10 SINE Alu 4 112 -5 2 830 402 254 66 36 chr17 32178483 32178679 -63093972 - RCHARR1 DNA MER1_type -2 972 771 2 830 314 194 14 43 chr17 32178690 32178760 -63093891 + B1_Mur2 SINE Alu 64 131 -18 2 830 478 252 0 0 chr17 32178758 32178861 -63093790 - B1_Mur4 SINE Alu -43 107 5 2 830 1241 254 111 17 chr17 32178879 32179295 -63093356 - RCHARR1 DNA MER1_type -516 458 4 2 830 998 202 76 31 chr17 32179325 32179550 -63093101 + B4 SINE B4 56 290 -2 2 830 256 187 168 21 chr17 32180968 32181062 -63091589 + PB1D10 SINE Alu 1 115 -5 2 830 968 80 65 0 chr17 32181573 32181711 -63090940 + B1_Mus2 SINE Alu 1 147 0 2 830 234 313 81 0 chr17 32181878 32181977 -63090674 - B3A SINE B2 -89 109 3 2 830 332 221 4 14 chr17 32182131 32182210 -63090441 + PB1D10 SINE Alu 40 120 0 2 830 710 220 8 0 chr17 32184031 32184163 -63088488 + B1_Mur4 SINE Alu 11 143 -7 3 830 1217 34 0 0 chr17 32184263 32184409 -63088242 - B1_Mus2 SINE Alu -1 146 1 3 830 397 268 21 0 chr17 32185046 32185143 -63087508 + PB1D10 SINE Alu 2 100 -17 3 830 743 67 9 0 chr17 32185781 32185886 -63086765 - B1_Mus2 SINE Alu 0 147 42 3 830 285 230 157 82 chr17 32185786 32185933 -63086718 - B4 SINE B4 -71 221 64 3 830 210 355 0 0 chr17 32186490 32186552 -63086099 + ID2 SINE ID 13 74 -9 3 830 180 0 0 0 chr17 32186855 32186875 -63085776 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 830 285 308 99 0 chr17 32187290 32187381 -63085270 + PB1D10 SINE Alu 6 105 -12 3 830 797 309 4 17 chr17 32188916 32189153 -63083498 - B4 SINE B4 -18 274 41 3 830 342 283 131 0 chr17 32189957 32190056 -63082595 + PB1D10 SINE Alu 6 117 0 3 830 420 252 63 0 chr17 32190065 32190176 -63082475 + PB1D9 SINE Alu 1 118 -2 3 830 314 239 63 18 chr17 32190289 32190400 -63082251 - PB1D7 SINE Alu -4 116 1 3 830 414 0 0 0 chr17 32190414 32190460 -63082191 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 3 830 655 186 7 44 chr17 32190460 32190585 -63082066 - B1_Mur2 SINE Alu -15 134 12 3 830 234 295 12 37 chr17 32190514 32190595 -63082056 - B4A SINE B4 -125 167 89 3 830 550 238 138 18 chr17 32190970 32191137 -63081514 - B3A SINE B2 -11 187 1 3 830 444 301 69 123 chr17 32191261 32191522 -63081129 + B4A SINE B4 43 289 -3 3 830 699 218 75 23 chr17 32192341 32192515 -63080136 + B3 SINE B2 8 190 -26 3 830 212 286 18 0 chr17 32193007 32193063 -63079588 - PB1D10 SINE Alu -1 116 60 3 830 489 248 8 0 chr17 32193152 32193269 -63079382 - B4A SINE B4 -173 119 2 3 830 395 312 55 0 chr17 32193315 32193443 -63079208 + ID_B1 SINE B4 90 224 0 3 830 209 200 0 22 chr17 32196443 32196489 -63076162 + GA-rich Low_complexity Low_complexity 3 47 0 3 830 498 155 19 102 chr17 32196507 32196615 -63076036 - PB1D9 SINE Alu 0 120 22 3 830 180 0 0 0 chr17 32196795 32196815 -63075836 + (TTGG)n Simple_repeat Simple_repeat 2 21 0 3 830 267 242 65 75 chr17 32196815 32196922 -63075729 - PB1D9 SINE Alu -10 110 5 3 830 351 0 0 0 chr17 32198591 32198630 -63074021 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 830 1094 58 0 0 chr17 32198630 32198769 -63073882 - B1_Mus2 SINE Alu -8 139 1 3 830 684 79 10 10 chr17 32200402 32200504 -63072147 + B2_Mm1t SINE B2 78 179 -14 3 830 359 74 0 50 chr17 32200515 32200582 -63072069 + B2_Mm2 SINE B2 48 109 -107 3 830 21 0 0 0 chr17 32200590 32200611 -63072040 + AT_rich Low_complexity Low_complexity 1 21 0 3 830 541 200 26 17 chr17 32201197 32201314 -63071337 + PB1D7 SINE Alu 2 119 -1 3 830 751 175 0 0 chr17 32202259 32202385 -63070266 + B1_Mur1 SINE Alu 16 141 -8 3 830 448 275 0 0 chr17 32202410 32202519 -63070132 + PB1D10 SINE Alu 3 111 -6 3 830 704 208 0 0 chr17 32202520 32202645 -63070006 + RSINE1 SINE B4 2 126 -39 3 830 563 113 69 0 chr17 32203385 32203509 -63069142 + B1_Mus1 SINE Alu 3 150 0 3 830 1036 86 7 0 chr17 32203512 32203651 -63069000 + B1_Mm SINE Alu 1 140 -7 3 830 180 111 0 0 chr17 32203674 32203701 -63068950 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 3 830 4074 101 142 1 chr17 32203719 32204365 -63068286 - RMER19A LTR ERVK 0 737 1 3 830 299 271 138 8 chr17 32204717 32204847 -63067804 + MLT1A1 LTR MaLR 245 391 -17 3 830 577 194 0 10 chr17 32205014 32205118 -63067533 - B1_Mus2 SINE Alu -35 112 10 3 830 243 0 0 0 chr17 32205182 32205209 -63067442 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 830 243 0 0 0 chr17 32205761 32205788 -63066863 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 830 1106 144 90 59 chr17 32207079 32207346 -63065305 + ORR1B1 LTR MaLR 1 287 -40 3 830 1927 128 66 0 chr17 32207346 32207650 -63065001 - ORR1A3 LTR MaLR -2 324 1 3 830 539 192 276 95 chr17 32207650 32207691 -63064960 + ORR1B1 LTR MaLR 288 327 0 3 830 1271 88 11 16 chr17 32209506 32209690 -63062961 + B2_Mm1t SINE B2 2 184 -9 3 830 465 103 0 0 chr17 32209737 32209805 -63062846 + (GGGA)n Simple_repeat Simple_repeat 3 70 0 3 830 246 229 82 0 chr17 32209863 32209924 -63062727 - PB1D7 SINE Alu -53 67 2 3 830 351 0 0 0 chr17 32210304 32210343 -63062308 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 830 192 111 0 0 chr17 32212037 32212073 -63060578 + (A)n Simple_repeat Simple_repeat 1 36 0 3 830 701 79 34 12 chr17 32212836 32212975 -63059676 - B1_Mus2 SINE Alu -1 148 1 3 830 227 263 14 36 chr17 32212975 32213021 -63059630 - ORR1B1-int LTR MaLR -862 647 605 3 830 462 79 0 0 chr17 32213023 32213086 -63059565 + (TTCC)n Simple_repeat Simple_repeat 3 65 0 3 830 381 43 0 0 chr17 32213705 32213752 -63058899 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 830 236 222 60 60 chr17 32214714 32214781 -63057870 - ID4 SINE ID -3 80 14 3 830 252 77 0 0 chr17 32215357 32215396 -63057255 + (CTTG)n Simple_repeat Simple_repeat 2 40 0 3 830 400 295 24 0 chr17 32217204 32217338 -63055313 - B1_Mur1 SINE Alu -2 147 5 3 830 830 211 75 5 chr17 32217578 32217778 -63054873 + B3 SINE B2 1 214 -2 3 830 249 235 29 29 chr17 32217974 32218044 -63054607 + MIRb SINE MIR 178 247 -21 3 830 247 311 44 0 chr17 32218268 32218358 -63054293 + MLT1B LTR MaLR 252 345 -45 3 830 558 122 0 0 chr17 32219766 32219864 -63052787 + (GGAA)n Simple_repeat Simple_repeat 4 101 0 3 830 429 219 62 0 chr17 32220065 32220161 -63052490 - PB1D7 SINE Alu -18 102 1 3 830 312 202 23 18 chr17 32220246 32220324 -63052327 - PB1D10 SINE Alu -21 99 20 3 830 213 267 79 13 chr17 32220263 32220339 -63052312 - ID_B1 SINE B4 -63 161 81 3 830 546 216 8 17 chr17 32221120 32221238 -63051413 - PB1D10 SINE Alu 0 117 1 3 830 412 277 30 8 chr17 32221238 32221369 -63051282 - L1M4 LINE L1 -570 5608 5475 3 830 210 246 0 34 chr17 32221440 32221499 -63051152 + (TATG)n Simple_repeat Simple_repeat 4 60 0 3 830 483 312 12 19 chr17 32221506 32221666 -63050985 - B3A SINE B2 -16 182 24 3 830 908 206 82 0 chr17 32221670 32221864 -63050787 - ID_B1 SINE B4 -14 210 1 3 830 351 65 0 0 chr17 32222443 32222489 -63050162 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 3 830 853 141 0 7 chr17 32222489 32222632 -63050019 - B1_Mur4 SINE Alu 0 150 9 3 830 1201 61 0 7 chr17 32222654 32222802 -63049849 - B1_Mus1 SINE Alu 0 148 2 3 830 943 237 9 9 chr17 32223320 32223533 -63049118 - B3 SINE B2 -3 213 1 3 830 632 271 158 0 chr17 32223557 32223734 -63048917 + B3 SINE B2 1 205 -11 3 830 491 276 110 0 chr17 32223753 32223880 -63048771 - B1_Mur1 SINE Alu -7 142 2 3 830 475 278 36 29 chr17 32223925 32224062 -63048589 + RSINE1 SINE B4 7 144 -21 3 830 1919 133 3 115 chr17 32224097 32224462 -63048189 + ORR1A3 LTR MaLR 1 324 -2 3 830 324 0 0 0 chr17 32224463 32224499 -63048152 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 830 1222 54 0 0 chr17 32225362 32225509 -63047142 + B1_Mm SINE Alu 1 147 0 3 830 225 0 0 0 chr17 32225509 32225534 -63047117 + (A)n Simple_repeat Simple_repeat 1 25 0 3 830 1168 82 0 0 chr17 32225546 32225705 -63046946 + B2_Mm2 SINE B2 2 160 -35 3 830 1280 63 11 0 chr17 32225707 32225881 -63046770 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 3 830 212 59 29 0 chr17 32226718 32226752 -63045899 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 830 185 254 46 31 chr17 32226898 32226963 -63045688 - MIR SINE MIR -91 171 106 3 830 258 246 58 0 chr17 32228021 32228090 -63044561 + B4 SINE B4 142 214 -78 3 830 1252 109 43 0 chr17 32229761 32229945 -63042706 - B2_Mm2 SINE B2 -1 194 3 3 830 951 131 24 47 chr17 32230025 32230194 -63042457 - B2_Mm2 SINE B2 -30 165 1 3 830 1294 108 43 0 chr17 32230433 32230619 -63042032 - B2_Mm2 SINE B2 0 195 2 3 830 225 178 0 0 chr17 32230816 32230861 -63041790 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 830 257 128 0 0 chr17 32230953 32230992 -63041659 + URR1A DNA MER1_type 58 96 -130 3 830 1095 201 127 46 chr17 32230992 32231299 -63041352 + IAPEY3_LTR LTR ERVK 1 332 0 3 830 1722 116 119 117 chr17 32231299 32231659 -63040992 + MMERVK10C-int LTR ERVK 1 361 -7220 3 830 817 137 7 0 chr17 32231784 32231923 -63040728 + MMERVK10C-int LTR ERVK 708 847 -6734 3 830 743 195 103 0 chr17 32231898 32232072 -63040579 + IAPEY3-int LTR ERVK 312 503 -4903 3 830 325 233 149 8 chr17 32232147 32232268 -63040383 + IAPEY3-int LTR ERVK 525 662 -5475 3 830 289 173 58 0 chr17 32232263 32232315 -63040336 + IAPEY3-int LTR ERVK 950 1004 -983 3 830 298 260 49 20 chr17 32232378 32232480 -63040171 + IAPEY3-int LTR ERVK 1462 1566 -6015 3 830 373 140 0 0 chr17 32232497 32232554 -63040097 + IAP-d-int LTR ERVK 447 503 -6039 3 830 1380 129 107 0 chr17 32232554 32232779 -63039872 + IAP-d-int LTR ERVK 5007 5255 -1287 3 830 1501 126 95 32 chr17 32232779 32233096 -63039555 + IAPEY3-int LTR ERVK 6965 7338 -342 3 830 1433 198 55 15 chr17 32233113 32233456 -63039195 + IAPEz-int LTR ERVK 6125 6481 0 3 830 1077 199 130 49 chr17 32233456 32233763 -63038888 + IAPEY3_LTR LTR ERVK 1 332 0 3 830 881 134 7 0 chr17 32233763 32233898 -63038753 + URR1A DNA MER1_type 90 225 -1 3 830 973 135 0 20 chr17 32233962 32234113 -63038538 + B1_Mur3 SINE Alu 2 149 0 3 830 22 0 0 0 chr17 32234125 32234147 -63038504 + AT_rich Low_complexity Low_complexity 1 22 0 3 830 393 200 31 31 chr17 32234191 32234289 -63038362 + PB1D9 SINE Alu 22 119 -1 3 830 217 234 10 182 chr17 32234294 32234341 -63038310 + ID2 SINE ID 1 38 -45 3 830 586 177 132 44 chr17 32234341 32234477 -63038174 + B1_Mus1 SINE Alu 1 148 0 3 830 217 234 10 182 chr17 32234477 32234528 -63038123 + ID2 SINE ID 39 82 -1 3 830 183 266 69 69 chr17 32234659 32234760 -63037891 + MIR3 SINE MIR 11 111 -97 3 830 1085 90 0 0 chr17 32235280 32235414 -63037237 - B1_Mus2 SINE Alu -13 134 1 3 830 1308 112 37 0 chr17 32235644 32235832 -63036819 + B2_Mm2 SINE B2 1 195 0 3 830 888 64 160 0 chr17 32235835 32235960 -63036691 + B1_Mm SINE Alu 2 146 -1 4 830 921 53 129 8 chr17 32238019 32238151 -63034500 + B1_Mus1 SINE Alu 1 148 0 4 830 855 78 0 0 chr17 32238158 32238274 -63034377 + (GAA)n Simple_repeat Simple_repeat 2 117 0 4 830 449 86 29 0 chr17 32238338 32238408 -63034243 + (GGAA)n Simple_repeat Simple_repeat 2 73 0 4 830 3260 39 42 0 chr17 32238577 32238961 -63033690 - MTB LTR MaLR 0 400 1 4 830 508 271 0 0 chr17 32239079 32239197 -63033454 + ID_B1 SINE B4 87 204 -20 4 830 1047 30 0 0 chr17 32239314 32239447 -63033204 + B2_Mm2 SINE B2 1 133 -62 4 830 725 211 89 20 chr17 32239435 32239638 -63033013 + ORR1C2 LTR MaLR 168 384 0 4 830 222 307 16 8 chr17 32239861 32239942 -63032709 - B1F1 SINE Alu -23 126 44 4 830 336 314 33 8 chr17 32240217 32240339 -63032312 - MLT1A LTR MaLR -15 359 235 4 830 1456 72 0 44 chr17 32240583 32240786 -63031865 - B2_Mm2 SINE B2 0 195 2 4 830 850 183 43 5 chr17 32240801 32240988 -63031663 - B2_Mm2 SINE B2 0 195 2 4 830 193 57 57 0 chr17 32241011 32241046 -63031605 + (TTC)n Simple_repeat Simple_repeat 2 38 0 4 830 1194 48 7 20 chr17 32241065 32241215 -63031436 - B1_Mus1 SINE Alu 0 148 1 4 830 915 98 0 0 chr17 32241216 32241348 -63031303 + (TTC)n Simple_repeat Simple_repeat 3 134 0 4 830 543 16 0 0 chr17 32241348 32241412 -63031239 + (TC)n Simple_repeat Simple_repeat 2 65 0 4 830 577 58 81 0 chr17 32241429 32241515 -63031136 - B2_Mm2 SINE B2 -102 93 1 4 830 435 16 49 0 chr17 32241603 32241664 -63030987 - PB1D9 SINE Alu -55 65 2 4 830 706 184 0 42 chr17 32242084 32242226 -63030425 + B1_Mus1 SINE Alu 1 136 -12 4 830 3933 116 46 51 chr17 32242226 32243001 -63029650 + RMER17D2 LTR ERVK 38 809 0 4 830 293 77 0 0 chr17 32243003 32243042 -63029609 + RMER17A-int LTR ERVK 3 41 -1687 4 830 334 311 66 0 chr17 32243053 32243159 -63029492 + PB1D9 SINE Alu 8 120 0 4 830 294 303 29 144 chr17 32243176 32243232 -63029419 + B4 SINE B4 41 72 -220 4 830 432 311 0 57 chr17 32243232 32243389 -63029262 + B1F2 SINE Alu 2 149 0 4 831 707 200 0 0 chr17 32244124 32244249 -63028402 - RSINE1 SINE B4 -39 126 2 4 831 440 240 0 0 chr17 32244250 32244346 -63028305 - PB1D10 SINE Alu -6 111 16 4 831 402 211 0 0 chr17 32244363 32244472 -63028179 + CT-rich Low_complexity Low_complexity 3 111 0 4 831 626 252 0 0 chr17 32244473 32244604 -63028047 - B1_Mur1 SINE Alu -1 148 18 4 831 225 286 54 142 chr17 32245942 32246146 -63026505 + RLTR41 LTR ERV1 199 384 -62 4 831 288 213 26 39 chr17 32246295 32246373 -63026278 + CT-rich Low_complexity Low_complexity 1 77 0 4 831 339 242 80 10 chr17 32246373 32246473 -63026178 - PB1D7 SINE Alu 0 120 14 4 831 351 255 21 21 chr17 32247144 32247240 -63025411 - PB1D10 SINE Alu -1 116 21 4 831 342 0 0 0 chr17 32247677 32247715 -63024936 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 831 518 277 62 0 chr17 32248659 32248789 -63023862 + RSINE1 SINE B4 15 152 -13 4 831 22 56 0 0 chr17 32248801 32248837 -63023814 + AT_rich Low_complexity Low_complexity 1 36 0 4 831 656 243 21 0 chr17 32248842 32248982 -63023669 + B1_Mur1 SINE Alu 6 148 -1 4 831 381 43 0 0 chr17 32248994 32249041 -63023610 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 4 831 1125 83 7 0 chr17 32249045 32249190 -63023461 - B1_Mus1 SINE Alu 0 148 3 4 831 318 264 24 11 chr17 32249202 32249318 -63023333 + B4 SINE B4 108 224 -68 4 831 517 227 118 22 chr17 32249343 32249478 -63023173 + B1_Mur1 SINE Alu 2 149 0 4 831 1186 63 6 0 chr17 32249611 32249769 -63022882 + B2_Mm1a SINE B2 2 160 -33 4 831 186 43 0 0 chr17 32249769 32249792 -63022859 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 4 831 2964 238 86 102 chr17 32252654 32253461 -63019190 - RMER1A Other Other -13 1017 230 4 831 2264 128 26 95 chr17 32253461 32253884 -63018767 - ORR1B1 LTR MaLR 0 394 1 4 831 2964 238 86 102 chr17 32253884 32254055 -63018596 - RMER1A Other Other -801 229 55 4 831 398 214 52 27 chr17 32255814 32255948 -63016703 + PB1D7 SINE Alu 1 122 -28 4 831 450 0 0 0 chr17 32255949 32255999 -63016652 + (TAA)n Simple_repeat Simple_repeat 2 51 0 4 831 365 56 19 0 chr17 32256983 32257037 -63015614 + B1_Mus2 SINE Alu 92 146 -1 4 831 201 171 0 0 chr17 32257043 32257078 -63015573 + (TAA)n Simple_repeat Simple_repeat 2 36 0 4 831 983 250 44 123 chr17 32257223 32257629 -63015022 + MTE2a LTR MaLR 1 374 -5 4 831 29 28 0 0 chr17 32258368 32258404 -63014247 + AT_rich Low_complexity Low_complexity 1 36 0 4 831 183 231 26 0 chr17 32259903 32259942 -63012709 + MIRm SINE MIR 37 76 -200 4 831 255 263 0 95 chr17 32259985 32260090 -63012561 - MER96B DNA hAT -32 385 291 4 831 873 54 14 65 chr17 32260093 32260231 -63012420 + B1_Mm SINE Alu 17 147 0 4 831 450 253 0 0 chr17 32260267 32260358 -63012293 + B1_Mm SINE Alu 9 99 -48 4 831 828 100 0 0 chr17 32260365 32260485 -63012166 + (GAAA)n Simple_repeat Simple_repeat 4 123 0 4 831 360 262 0 15 chr17 32260529 32260632 -63012019 + B1F1 SINE Alu 21 118 -2 4 831 331 273 0 0 chr17 32260657 32260734 -63011917 + RSINE1 SINE B4 7 83 -82 4 831 237 309 23 162 chr17 32260658 32260874 -63011777 + B2_Mm1t SINE B2 7 192 -1 4 831 234 314 147 0 chr17 32260873 32260975 -63011676 + PB1D10 SINE Alu 1 117 0 4 831 864 45 0 0 chr17 32261410 32261520 -63011131 + B2_Mm2 SINE B2 2 111 -84 4 831 423 0 0 0 chr17 32261529 32261576 -63011075 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 831 1204 55 7 0 chr17 32261592 32261737 -63010914 - B1_Mus1 SINE Alu -2 146 1 4 831 351 302 0 2 chr17 32261873 32261984 -63010667 + L1M4 LINE L1 5328 5436 -861 4 831 1277 34 0 0 chr17 32262170 32262317 -63010334 + B1_Mus2 SINE Alu 1 147 0 4 831 1098 131 56 22 chr17 32262477 32262657 -63009994 - B2_Mm2 SINE B2 -8 187 2 4 831 834 225 20 30 chr17 32262665 32262862 -63009789 - B3A SINE B2 0 198 4 4 831 344 243 175 0 chr17 32262942 32263045 -63009606 + ID_B1 SINE B4 4 124 -100 4 831 539 268 68 110 chr17 32263042 32263377 -63009274 - MTD LTR MaLR -65 354 9 4 831 665 269 0 60 chr17 32263621 32263803 -63008848 - B3A SINE B2 -4 194 24 4 831 369 0 0 0 chr17 32263803 32263844 -63008807 + (TTG)n Simple_repeat Simple_repeat 1 41 0 4 831 1082 112 87 27 chr17 32263857 32264040 -63008611 + B2_Mm2 SINE B2 1 194 -1 4 831 579 269 113 46 chr17 32264045 32264240 -63008411 - ID_B1 SINE B4 -15 209 2 4 831 337 344 0 13 chr17 32264247 32264400 -63008251 - MER3 DNA MER1_type -58 151 1 4 831 5632 182 103 45 chr17 32264421 32265804 -63006847 + RLTR42-int LTR ERVK 4059 5521 -1 4 831 663 102 65 0 chr17 32265807 32265915 -63006736 + RLTR42 LTR ERVK 5 119 -120 4 831 1394 137 18 23 chr17 32266222 32266439 -63006212 + B3 SINE B2 1 216 0 4 831 321 26 0 0 chr17 32266717 32266755 -63005896 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 831 300 307 38 47 chr17 32266755 32266861 -63005790 - B4A SINE B4 -173 119 15 4 831 269 272 0 98 chr17 32267198 32267300 -63005351 + MER20 DNA MER1_type 122 213 -6 4 831 420 284 153 19 chr17 32267598 32267803 -63004848 + RLTR12B LTR ERVK 2 251 -277 4 831 1031 75 0 39 chr17 32267808 32267961 -63004690 + B1_Mus2 SINE Alu 1 147 0 4 831 412 318 14 148 chr17 32268003 32268178 -63004473 + L1MA5 LINE L1 5461 5619 -681 4 831 1426 88 5 0 chr17 32268178 32268370 -63004281 + B2_Mm1a SINE B2 1 193 0 4 831 412 318 14 148 chr17 32268370 32268619 -63004032 + L1MA5 LINE L1 5620 5828 -472 4 831 500 250 108 0 chr17 32268623 32268743 -63003908 + ID_B1 SINE B4 84 216 -8 4 831 258 182 36 0 chr17 32268776 32268831 -63003820 + L1MA5 LINE L1 5847 5903 -397 4 831 245 167 0 18 chr17 32268938 32268993 -63003658 + GA-rich Low_complexity Low_complexity 1 54 0 4 831 504 317 109 0 chr17 32269516 32269718 -63002933 + B4A SINE B4 47 270 -22 4 831 1495 49 38 0 chr17 32269848 32270033 -63002618 + B2_Mm1a SINE B2 2 193 0 4 831 777 148 16 8 chr17 32270042 32270171 -63002480 + B1_Mur4 SINE Alu 7 136 -14 4 831 26 0 0 0 chr17 32270173 32270199 -63002452 + GC_rich Low_complexity Low_complexity 1 26 0 4 831 285 320 68 0 chr17 32271051 32271154 -63001497 + RSINE1 SINE B4 17 126 -39 4 831 719 236 7 13 chr17 32271200 32271350 -63001301 + B1_Mur2 SINE Alu 1 149 0 4 831 592 195 30 0 chr17 32271358 32271522 -63001129 + GA-rich Low_complexity Low_complexity 1 169 0 4 831 756 132 0 58 chr17 32271532 32271669 -63000982 + B1_Mur4 SINE Alu 1 129 -21 4 831 937 110 14 20 chr17 32271670 32271818 -63000833 + B1_Mus2 SINE Alu 1 147 0 4 831 1378 86 21 0 chr17 32271823 32272010 -63000641 + B2_Mm1t SINE B2 2 192 -1 4 831 306 327 69 0 chr17 32272015 32272116 -63000535 + HAL1 LINE L1 881 988 -1519 4 831 305 270 0 0 chr17 32272755 32272818 -62999833 + B1_Mur4 SINE Alu 1 63 -87 4 831 1221 61 0 0 chr17 32272819 32272966 -62999685 + B1_Mus1 SINE Alu 1 147 -1 4 831 26 64 0 0 chr17 32272967 32273014 -62999637 + AT_rich Low_complexity Low_complexity 1 47 0 4 831 459 264 32 16 chr17 32273029 32273152 -62999499 + RSINE1 SINE B4 35 159 -6 4 831 760 192 65 13 chr17 32273225 32273378 -62999273 - B3 SINE B2 -55 161 1 4 831 37 62 0 0 chr17 32273379 32273444 -62999207 + AT_rich Low_complexity Low_complexity 1 65 0 4 831 290 262 0 0 chr17 32273495 32273556 -62999095 + PB1 SINE Alu 2 62 -65 5 831 254 278 0 27 chr17 32273623 32273697 -62998954 - B4 SINE B4 -5 287 216 5 831 1058 99 14 0 chr17 32273715 32273856 -62998795 - B1_Mur4 SINE Alu -6 144 2 5 831 436 261 111 7 chr17 32273860 32273995 -62998656 - B4 SINE B4 -63 229 81 5 831 1155 130 0 5 chr17 32274174 32274359 -62998292 - URR1B DNA MER1_type 0 225 42 5 831 402 325 86 62 chr17 32275084 32275327 -62997324 - B4A SINE B4 -3 289 41 5 831 337 322 12 0 chr17 32277001 32277116 -62995535 - ID4_ SINE ID -33 119 4 5 831 486 253 37 17 chr17 32277616 32277738 -62994913 + B1F SINE Alu 2 119 -1 5 831 357 224 191 50 chr17 32277771 32277912 -62994739 + RSINE1 SINE B4 5 165 0 5 831 807 226 12 162 chr17 32278791 32278842 -62993809 - ID_B1 SINE B4 -8 216 174 5 831 570 248 72 0 chr17 32278842 32278967 -62993684 + B1_Mur2 SINE Alu 1 134 -15 5 831 274 23 0 44 chr17 32278968 32279013 -62993638 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 5 831 1143 97 0 0 chr17 32279013 32279157 -62993494 - B1_Mus2 SINE Alu -3 144 1 5 831 807 226 12 162 chr17 32279157 32279355 -62993296 - ID_B1 SINE B4 -51 173 3 5 831 251 206 15 73 chr17 32279467 32279535 -62993116 - ID4_ SINE ID 0 83 20 5 831 207 0 0 0 chr17 32279720 32279743 -62992908 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 831 741 203 7 33 chr17 32279743 32279889 -62992762 - B1_Mur1 SINE Alu -5 144 1 5 831 708 223 283 11 chr17 32281971 32282257 -62990394 + MTD LTR MaLR 22 385 -34 5 831 896 245 82 43 chr17 32282448 32282729 -62989922 + B4A SINE B4 1 292 0 5 831 620 191 9 0 chr17 32282756 32282866 -62989785 + PB1D9 SINE Alu 2 112 -8 5 831 720 70 17 17 chr17 32282867 32282984 -62989667 + (GAAA)n Simple_repeat Simple_repeat 4 120 0 5 831 693 216 7 39 chr17 32282992 32283146 -62989505 + B1_Mur2 SINE Alu 1 149 0 5 831 183 42 0 0 chr17 32283149 32283173 -62989478 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 5 831 580 226 24 24 chr17 32285066 32285193 -62987458 - B1_Mur1 SINE Alu -7 142 16 5 831 1272 28 7 0 chr17 32285383 32285528 -62987123 + B1_Mm SINE Alu 2 147 0 5 831 279 0 0 0 chr17 32285528 32285559 -62987092 + (CAAAAA)n Simple_repeat Simple_repeat 5 35 0 5 831 517 275 88 0 chr17 32285578 32285759 -62986892 + MER2 DNA MER2_type 6 202 -143 5 831 704 261 12 19 chr17 32285759 32285919 -62986732 + RSINE1 SINE B4 2 160 -5 5 831 242 143 20 0 chr17 32285920 32285969 -62986682 + CT-rich Low_complexity Low_complexity 2 51 0 5 831 384 234 184 28 chr17 32285991 32286132 -62986519 + RSINE1 SINE B4 3 165 0 5 831 508 291 48 6 chr17 32286144 32286310 -62986341 + MER2 DNA MER2_type 173 339 -6 5 831 297 261 129 109 chr17 32286356 32286558 -62986093 + MER33 DNA MER1_type 1 206 -118 5 831 432 0 0 0 chr17 32286603 32286651 -62986000 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 831 192 211 42 0 chr17 32287465 32287536 -62985115 + GA-rich Low_complexity Low_complexity 2 75 0 5 831 377 66 16 0 chr17 32287769 32287830 -62984821 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 5 831 457 277 114 66 chr17 32287838 32288109 -62984542 + B4A SINE B4 1 284 -8 5 831 360 0 0 0 chr17 32288840 32288880 -62983771 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 831 233 146 21 0 chr17 32288896 32288944 -62983707 + CT-rich Low_complexity Low_complexity 2 50 0 5 831 270 0 0 0 chr17 32288957 32288987 -62983664 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 5 831 449 222 47 118 chr17 32288987 32289118 -62983533 - B3 SINE B2 -17 199 80 5 831 3550 204 82 9 chr17 32289118 32289896 -62982755 + Lx6 LINE L1 6415 7249 -211 5 831 448 248 74 42 chr17 32289896 32290071 -62982580 - B3 SINE B2 -3 190 2 5 831 571 256 0 17 chr17 32290081 32290200 -62982451 - B1F1 SINE Alu -2 147 31 5 831 423 245 65 9 chr17 32290238 32290345 -62982306 + RSINE1 SINE B4 24 136 -29 5 831 470 206 0 61 chr17 32291486 32291584 -62981067 + RSINE1 SINE B4 6 97 -68 5 831 528 194 20 20 chr17 32291878 32291978 -62980673 - PB1D10 SINE Alu -6 111 12 5 831 371 229 19 68 chr17 32291894 32291997 -62980654 - ID_B1 SINE B4 -48 176 79 5 831 413 265 124 40 chr17 32292193 32292370 -62980281 + B4A SINE B4 2 193 -99 5 831 600 151 11 11 chr17 32292279 32292373 -62980278 + B1_Mur1 SINE Alu 14 107 -42 5 831 606 269 63 26 chr17 32292413 32292449 -62980202 - B3A SINE B2 0 198 165 5 831 243 0 0 0 chr17 32292449 32292476 -62980175 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 831 606 269 63 26 chr17 32292476 32292630 -62980021 - B3A SINE B2 -34 164 1 5 831 350 42 21 0 chr17 32292631 32292679 -62979972 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 5 831 765 221 0 0 chr17 32292679 32292815 -62979836 - B1_Mur2 SINE Alu -12 137 2 5 831 207 100 0 0 chr17 32293514 32293544 -62979107 + (CAT)n Simple_repeat Simple_repeat 1 30 0 5 831 470 287 54 8 chr17 32293566 32293696 -62978955 - RSINE1 SINE B4 -13 152 17 5 831 306 0 0 0 chr17 32293794 32293828 -62978823 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 5 831 396 0 0 0 chr17 32293832 32293878 -62978773 - B1_Mm SINE Alu -5 142 97 5 831 801 252 5 60 chr17 32294010 32294225 -62978426 + B3 SINE B2 1 203 -13 5 831 335 241 47 94 chr17 32294267 32294396 -62978255 + PB1D9 SINE Alu 4 127 0 5 831 225 333 0 35 chr17 32294404 32294491 -62978160 + RSINE1 SINE B4 29 112 -53 5 831 189 155 52 0 chr17 32294619 32294677 -62977974 + CT-rich Low_complexity Low_complexity 2 62 0 5 831 320 243 14 0 chr17 32294679 32294749 -62977902 - ID4_ SINE ID -12 71 1 5 831 356 225 16 67 chr17 32296064 32296171 -62976480 - PB1D9 SINE Alu 0 149 40 5 831 376 258 0 0 chr17 32296175 32296272 -62976379 + CT-rich Low_complexity Low_complexity 2 98 0 5 831 431 115 7 119 chr17 32296275 32296661 -62975990 + (TCTCTG)n Simple_repeat Simple_repeat 1 342 0 5 831 441 218 60 0 chr17 32296661 32296794 -62975857 + (CCTG)n Simple_repeat Simple_repeat 3 143 0 5 831 255 185 74 0 chr17 32296796 32296850 -62975801 - PB1D9 SINE Alu -61 59 2 5 831 183 365 177 31 chr17 32296855 32296985 -62975666 - L2b LINE L2 -2 3373 3225 5 831 632 219 39 0 chr17 32297115 32297243 -62975408 + ID_B1 SINE B4 84 216 -8 5 831 396 268 0 0 chr17 32297274 32297356 -62975295 + ID4 SINE ID 2 83 0 5 831 793 271 85 0 chr17 32297439 32297638 -62975013 - B3 SINE B2 0 216 1 5 831 376 203 319 21 chr17 32297660 32297801 -62974850 - B3A SINE B2 -15 183 1 5 831 226 324 29 0 chr17 32297828 32297896 -62974755 + ID4_ SINE ID 4 73 -10 5 831 724 280 96 42 chr17 32297904 32298165 -62974486 + MLT1C LTR MaLR 187 461 -6 5 831 245 244 26 36 chr17 32298190 32298313 -62974338 - L2b LINE L2 -282 3144 3026 5 831 1175 50 0 0 chr17 32298597 32298736 -62973915 + B1_Mus1 SINE Alu 5 143 -5 5 831 659 236 111 0 chr17 32300176 32300320 -62972331 - RSINE1 SINE B4 -4 161 2 5 831 295 157 156 78 chr17 32300343 32300433 -62972218 - PB1D7 SINE Alu -10 110 14 5 831 275 348 66 7 chr17 32300643 32300779 -62971872 - MIRc SINE MIR -101 167 24 5 831 217 314 45 23 chr17 32300868 32300956 -62971695 - MIR SINE MIR -155 107 18 5 831 306 0 0 0 chr17 32301961 32301995 -62970656 + (A)n Simple_repeat Simple_repeat 1 34 0 5 831 210 174 0 0 chr17 32302099 32302145 -62970506 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 831 189 0 0 0 chr17 32303533 32303554 -62969097 + (TA)n Simple_repeat Simple_repeat 1 21 0 5 831 262 286 0 13 chr17 32303641 32303719 -62968932 + (CGG)n Simple_repeat Simple_repeat 3 79 0 5 831 24 67 0 0 chr17 32303849 32303894 -62968757 + GC_rich Low_complexity Low_complexity 1 45 0 5 831 300 111 0 0 chr17 32304518 32304563 -62968088 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 831 329 200 18 0 chr17 32304877 32304932 -62967719 + RSINE1 SINE B4 74 129 -36 5 831 483 197 52 0 chr17 32305019 32305121 -62967530 + B1_Mur2 SINE Alu 6 120 -29 5 831 246 314 80 23 chr17 32305044 32305132 -62967519 + B4 SINE B4 127 219 -73 5 831 495 45 0 0 chr17 32305138 32305204 -62967447 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 831 384 323 24 71 chr17 32305209 32305379 -62967272 - B3A SINE B2 -35 163 2 5 831 797 280 33 5 chr17 32305406 32305621 -62967030 - ID_B1 SINE B4 -2 222 2 5 831 349 318 134 17 chr17 32305729 32305908 -62966743 - L1MC4 LINE L1 -492 7550 7351 5 831 257 243 40 26 chr17 32305943 32306019 -62966632 - ID4_ SINE ID 0 83 7 5 831 486 306 22 22 chr17 32306019 32306155 -62966496 - ID_B1 SINE B4 -5 219 84 5 831 757 145 138 0 chr17 32306155 32306300 -62966351 + ORR1B1 LTR MaLR 1 165 -229 5 831 281 242 95 66 chr17 32306331 32306468 -62966183 - L1MB5 LINE L1 -1 6173 6033 5 831 573 233 60 0 chr17 32306559 32306692 -62965959 - RSINE1 SINE B4 -12 153 13 5 831 363 196 20 98 chr17 32306753 32306855 -62965796 - B1F2 SINE Alu -10 139 46 5 831 480 188 268 0 chr17 32307099 32307211 -62965440 + B1_Mus1 SINE Alu 2 143 -5 5 831 632 264 107 0 chr17 32307232 32307391 -62965260 + B3A SINE B2 5 180 -18 5 831 443 273 90 8 chr17 32307450 32307572 -62965079 - RSINE1 SINE B4 0 165 34 5 831 1224 68 0 0 chr17 32307747 32307895 -62964756 + B1_Mus1 SINE Alu 1 148 0 5 831 1059 233 20 10 chr17 32308025 32308229 -62964422 + B3 SINE B2 11 216 0 5 831 231 258 129 0 chr17 32308269 32308331 -62964320 + ID_B1 SINE B4 88 157 -67 5 831 197 237 17 0 chr17 32308399 32308458 -62964193 + (TA)n Simple_repeat Simple_repeat 2 61 0 6 831 1107 158 59 16 chr17 32308590 32308777 -62963874 + B3 SINE B2 17 211 -5 6 831 737 259 65 15 chr17 32308802 32309002 -62963649 + ID_B1 SINE B4 5 214 -10 6 831 518 248 92 8 chr17 32309178 32309308 -62963343 + B1_Mur2 SINE Alu 1 141 -8 6 831 396 0 0 0 chr17 32309311 32309355 -62963296 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 6 831 599 240 39 0 chr17 32309355 32309484 -62963167 + RSINE1 SINE B4 4 137 -28 6 831 25 51 0 0 chr17 32309496 32309535 -62963116 + AT_rich Low_complexity Low_complexity 1 39 0 6 831 314 230 26 39 chr17 32310761 32310819 -62961832 - L1MEg LINE L1 -4133 1951 1893 6 831 1230 48 0 0 chr17 32310819 32310965 -62961686 - B1_Mus1 SINE Alu -2 146 1 6 831 314 230 26 39 chr17 32310965 32310983 -62961668 - L1MEg LINE L1 -4192 1892 1876 6 831 936 210 48 39 chr17 32310994 32311202 -62961449 - B3 SINE B2 0 216 7 6 831 548 255 82 57 chr17 32311253 32311411 -62961240 - RSINE1 SINE B4 0 165 4 6 831 342 45 0 0 chr17 32311414 32311458 -62961193 + (TATG)n Simple_repeat Simple_repeat 1 44 0 6 831 666 258 29 91 chr17 32311458 32311633 -62961018 - ID_B1 SINE B4 -13 211 48 6 831 218 140 17 167 chr17 32311653 32311676 -62960975 - PB1D10 SINE Alu -1 116 98 6 831 261 0 0 0 chr17 32311676 32311705 -62960946 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 831 1177 69 0 0 chr17 32311705 32311844 -62960807 - B1_Mus1 SINE Alu -4 144 6 6 831 218 140 17 167 chr17 32311844 32311884 -62960767 - PB1D10 SINE Alu -20 97 66 6 831 1546 112 185 17 chr17 32311889 32312207 -62960444 + ORR1A2 LTR MaLR 1 346 0 6 831 290 241 158 2 chr17 32312355 32312449 -62960202 + B1F SINE Alu 6 117 0 6 831 899 156 204 11 chr17 32312483 32312664 -62959987 - B3 SINE B2 0 216 1 6 831 284 135 19 0 chr17 32312665 32312716 -62959935 - MTD LTR MaLR -5 414 363 6 831 323 104 21 0 chr17 32312716 32312764 -62959887 + B1_Mur4 SINE Alu 2 50 -100 6 831 413 115 0 60 chr17 32312764 32312823 -62959828 + T-rich Low_complexity Low_complexity 20 78 0 6 831 1215 55 0 0 chr17 32312823 32312969 -62959682 - B1_Mus2 SINE Alu 0 147 2 6 831 413 115 0 60 chr17 32312969 32312992 -62959659 + T-rich Low_complexity Low_complexity 1 19 0 6 831 273 57 0 0 chr17 32313014 32313049 -62959602 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 6 831 332 143 0 0 chr17 32313068 32313117 -62959534 - PB1D9 SINE Alu -71 49 1 6 831 763 54 0 0 chr17 32313117 32313209 -62959442 + B1_Mus2 SINE Alu 50 141 -6 6 831 225 83 0 0 chr17 32313210 32313246 -62959405 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 6 831 809 256 69 5 chr17 32313246 32313450 -62959201 - MTD LTR MaLR -47 372 156 6 831 275 246 29 0 chr17 32313696 32313765 -62958886 - ID4 SINE ID -12 71 1 6 831 221 221 197 42 chr17 32314080 32314151 -62958500 + ID4 SINE ID 2 83 0 6 831 736 194 30 170 chr17 32314175 32314405 -62958246 - B3A SINE B2 0 198 1 6 831 24 0 0 0 chr17 32314483 32314507 -62958144 + AT_rich Low_complexity Low_complexity 1 24 0 6 831 442 246 27 40 chr17 32314510 32314528 -62958123 + ID_B1 SINE B4 79 224 0 6 831 870 123 0 0 chr17 32314528 32314658 -62957993 + B1_Mus2 SINE Alu 18 147 0 6 831 360 161 0 0 chr17 32314661 32314742 -62957909 + A-rich Low_complexity Low_complexity 1 81 0 6 831 380 258 27 16 chr17 32314783 32315046 -62957605 + (TG)n Simple_repeat Simple_repeat 1 266 0 6 831 281 300 118 20 chr17 32315046 32315148 -62957503 + B1F SINE Alu 38 149 0 6 831 267 31 0 0 chr17 32316401 32316433 -62956218 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 6 831 521 300 26 7 chr17 32317635 32317786 -62954865 + RSINE1 SINE B4 2 155 -10 6 831 205 156 0 0 chr17 32317897 32317929 -62954722 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 831 463 205 0 0 chr17 32317966 32318044 -62954607 + RSINE1 SINE B4 3 80 -85 6 831 927 174 0 0 chr17 32318070 32318214 -62954437 + B1_Mus1 SINE Alu 2 145 -3 6 831 561 228 189 12 chr17 32318264 32318428 -62954223 + B3 SINE B2 17 209 -7 6 831 534 243 9 0 chr17 32318429 32318536 -62954115 + PB1D9 SINE Alu 1 108 -12 6 831 180 0 0 0 chr17 32318536 32318556 -62954095 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 6 831 1244 47 0 7 chr17 32318575 32318724 -62953927 + B1_Mus1 SINE Alu 1 148 0 6 831 203 30 61 0 chr17 32318724 32318752 -62953899 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 6 831 530 231 103 15 chr17 32318771 32318907 -62953744 + B1_Mur2 SINE Alu 1 148 -1 6 831 349 329 0 63 chr17 32319004 32319163 -62953488 - B1F1 SINE Alu 0 149 1 6 831 408 253 35 0 chr17 32319239 32319326 -62953325 + B1F1 SINE Alu 1 90 -59 6 831 315 0 0 0 chr17 32319335 32319370 -62953281 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 831 342 67 0 0 chr17 32319464 32319509 -62953142 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 831 651 280 0 26 chr17 32319511 32319665 -62952986 - RSINE1 SINE B4 -14 151 2 6 831 222 37 0 0 chr17 32319888 32319915 -62952736 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 831 458 299 0 9 chr17 32320404 32320512 -62952139 - PB1D10 SINE Alu -6 111 5 6 831 241 296 0 18 chr17 32320583 32320638 -62952013 - RSINE1 SINE B4 -100 65 12 6 831 987 141 0 0 chr17 32320761 32320896 -62951755 + B1_Mus1 SINE Alu 5 139 -9 6 831 462 18 0 0 chr17 32320896 32320951 -62951700 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 831 270 338 0 0 chr17 32320965 32321036 -62951615 - B3 SINE B2 -10 206 136 6 831 270 338 0 0 chr17 32321061 32321132 -62951519 - B3 SINE B2 -10 206 136 6 831 237 343 0 0 chr17 32321155 32321222 -62951429 - B3 SINE B2 -10 206 140 6 831 315 0 0 0 chr17 32321222 32321257 -62951394 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 831 770 325 0 10 chr17 32321271 32321473 -62951178 - B3 SINE B2 -10 206 7 6 831 392 301 18 0 chr17 32322638 32322751 -62949900 + B3A SINE B2 8 122 -76 6 831 198 71 0 0 chr17 32322756 32322784 -62949867 + (T)n Simple_repeat Simple_repeat 1 28 0 6 831 1194 63 0 0 chr17 32322786 32322928 -62949723 - B1_Mus2 SINE Alu -5 142 1 6 831 935 158 14 0 chr17 32323016 32323162 -62949489 + B1_Mur4 SINE Alu 3 150 0 6 831 264 326 170 0 chr17 32323254 32323401 -62949250 - MIRm SINE MIR -3 273 102 6 831 570 269 13 27 chr17 32323541 32323690 -62948961 + B1_Mur1 SINE Alu 2 148 -1 6 831 700 213 55 34 chr17 32323903 32324049 -62948602 - B1_Mur1 SINE Alu 0 149 1 6 831 383 200 40 0 chr17 32324109 32324184 -62948467 - PB1D10 SINE Alu -3 114 37 6 831 388 173 272 0 chr17 32324242 32324323 -62948328 - PB1D9 SINE Alu -4 116 14 6 831 642 255 96 5 chr17 32324343 32324540 -62948111 - B3 SINE B2 -1 215 1 6 831 987 34 0 0 chr17 32324812 32324931 -62947720 + (TC)n Simple_repeat Simple_repeat 1 119 0 6 831 436 286 111 0 chr17 32326597 32326723 -62945928 + RSINE1 SINE B4 11 150 -15 6 831 486 250 58 0 chr17 32326732 32326852 -62945799 + B1_Mur1 SINE Alu 23 149 0 6 831 274 301 103 34 chr17 32327639 32327756 -62944895 - MIRb SINE MIR -73 195 71 6 831 1491 69 5 0 chr17 32328248 32328436 -62944215 - B2_Mm1a SINE B2 -4 189 1 6 831 1595 17 39 0 chr17 32328593 32328773 -62943878 + B2_Mm1a SINE B2 1 187 -6 6 831 1157 136 28 6 chr17 32328780 32328958 -62943693 + B2_Mm2 SINE B2 2 183 -12 6 831 2383 216 38 90 chr17 32328960 32329652 -62942999 + Lx6 LINE L1 5767 6422 -1038 6 831 1520 180 166 28 chr17 32329672 32329789 -62942862 + Lx6 LINE L1 6627 6741 -719 6 831 579 15 0 0 chr17 32329789 32329857 -62942794 + (CA)n Simple_repeat Simple_repeat 2 69 0 6 831 1520 180 166 28 chr17 32329857 32330167 -62942484 + Lx6 LINE L1 6742 7112 -348 6 831 688 110 2 1 chr17 32330217 32330317 -62942334 - B1_Mus2 SINE Alu -23 124 26 6 831 1084 206 60 35 chr17 32330330 32330430 -62942221 + Lx6 LINE L1 7170 7264 -196 6 831 1167 104 21 21 chr17 32330430 32330616 -62942035 - B2_Mm1t SINE B2 -6 187 2 6 831 1084 206 60 35 chr17 32330616 32330797 -62941854 + Lx6 LINE L1 7265 7458 -2 6 831 237 170 268 13 chr17 32330877 32330963 -62941688 - PB1D10 SINE Alu -7 120 31 6 831 637 310 55 0 chr17 32330963 32331163 -62941488 - ID_B1 SINE B4 -6 218 8 6 831 245 208 104 65 chr17 32331404 32331481 -62941170 - B1_Mus2 SINE Alu -67 80 1 6 831 363 124 0 22 chr17 32331525 32331591 -62941060 - B2_Mm2 SINE B2 -107 109 47 6 831 1343 69 11 11 chr17 32331594 32331770 -62940881 - B2_Mm1t SINE B2 -17 176 1 6 831 320 286 0 0 chr17 32332012 32332075 -62940576 + L1MEg LINE L1 1882 1944 -4140 6 831 251 176 29 29 chr17 32333890 32333960 -62938691 + A-rich Low_complexity Low_complexity 2 71 0 6 831 399 83 0 0 chr17 32335095 32335155 -62937496 + (CTG)n Simple_repeat Simple_repeat 1 60 0 6 831 212 290 65 0 chr17 32337643 32337705 -62934946 + L2c LINE L2 3120 3185 -202 6 831 262 254 23 23 chr17 32338127 32338260 -62934391 + (TGG)n Simple_repeat Simple_repeat 1 133 0 6 831 225 301 0 0 chr17 32339351 32339444 -62933207 + (CGG)n Simple_repeat Simple_repeat 2 94 0 6 831 252 0 0 0 chr17 32342938 32342966 -62929685 + (A)n Simple_repeat Simple_repeat 1 28 0 6 831 225 0 0 0 chr17 32349713 32349738 -62922913 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 831 212 200 0 16 chr17 32350553 32350614 -62922037 + CT-rich Low_complexity Low_complexity 2 61 0 6 831 208 130 43 0 chr17 32350689 32350735 -62921916 + GA-rich Low_complexity Low_complexity 1 48 0 6 831 322 260 54 71 chr17 32350763 32350875 -62921776 + PB1D9 SINE Alu 2 111 -9 6 831 183 114 0 0 chr17 32351876 32351911 -62920740 + (A)n Simple_repeat Simple_repeat 1 35 0 7 831 477 0 0 0 chr17 32352286 32352339 -62920312 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 831 1283 51 0 0 chr17 32352578 32352734 -62919917 + B2_Mm1a SINE B2 2 157 -36 7 831 1939 158 78 14 chr17 32352748 32353107 -62919544 + RMER1A Other Other 356 737 -293 7 831 225 147 29 0 chr17 32353106 32353140 -62919511 - Lx5 LINE L1 -308 6742 6708 7 831 207 0 0 0 chr17 32353149 32353172 -62919479 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 831 1165 89 0 0 chr17 32353215 32353361 -62919290 + B1_Mus2 SINE Alu 2 147 0 7 831 564 29 0 0 chr17 32353363 32353433 -62919218 + (GGAA)n Simple_repeat Simple_repeat 1 70 0 7 831 870 57 148 0 chr17 32353872 32353994 -62918657 + B1_Mus2 SINE Alu 2 141 -6 7 831 195 129 0 0 chr17 32353997 32354028 -62918623 + (A)n Simple_repeat Simple_repeat 1 31 0 7 831 668 200 29 15 chr17 32354059 32354196 -62918455 + B2_Mm2 SINE B2 2 140 -55 7 831 213 39 0 0 chr17 32354226 32354252 -62918399 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 7 831 1136 82 0 7 chr17 32354265 32354413 -62918238 - B1_Mus1 SINE Alu 0 148 2 7 831 224 296 87 138 chr17 32354423 32354539 -62918112 - B2_Mm2 SINE B2 -5 190 5 7 831 224 282 38 25 chr17 32354539 32354619 -62918032 - B4A SINE B4 -207 85 5 7 831 22 0 0 0 chr17 32355086 32355108 -62917543 + GC_rich Low_complexity Low_complexity 1 22 0 7 831 192 111 0 0 chr17 32355635 32355671 -62916980 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 7 831 1210 62 0 0 chr17 32355675 32355820 -62916831 + B1_Mus2 SINE Alu 3 147 0 7 831 239 0 32 0 chr17 32355863 32355894 -62916757 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 7 831 322 316 62 19 chr17 32355896 32356057 -62916594 + B3A SINE B2 31 198 0 7 831 248 103 51 0 chr17 32356511 32356550 -62916101 + B3A SINE B2 9 49 -149 7 831 1013 116 96 28 chr17 32356595 32356772 -62915879 + B2_Mm1t SINE B2 3 191 -2 7 831 330 145 43 14 chr17 32356916 32356978 -62915673 + B1_Mur2 SINE Alu 78 139 -10 7 831 279 0 0 0 chr17 32356978 32357009 -62915642 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 831 663 25 0 0 chr17 32357275 32357356 -62915295 + (TC)n Simple_repeat Simple_repeat 2 82 0 7 831 225 0 0 0 chr17 32357356 32357380 -62915271 + (TG)n Simple_repeat Simple_repeat 2 26 0 7 831 287 302 9 94 chr17 32359740 32359835 -62912816 + PB1D10 SINE Alu 21 108 -9 7 831 198 0 0 0 chr17 32359835 32359857 -62912794 + (CAGA)n Simple_repeat Simple_repeat 2 23 0 7 831 229 219 0 27 chr17 32360151 32360226 -62912425 + GA-rich Low_complexity Low_complexity 4 76 0 7 831 26 50 0 0 chr17 32362819 32362859 -62909792 + AT_rich Low_complexity Low_complexity 1 40 0 7 831 795 237 61 24 chr17 32362907 32363119 -62909532 - Lx8 LINE L1 -100 7373 7154 7 831 917 93 55 35 chr17 32363922 32364067 -62908584 - B1_Mus1 SINE Alu 0 148 1 7 831 1595 212 42 50 chr17 32364631 32364988 -62907663 + ORR1D1 LTR MaLR 13 366 -8 7 831 861 38 0 0 chr17 32365855 32365961 -62906690 - B1_Mus1 SINE Alu -42 106 1 7 831 348 213 7 34 chr17 32365961 32365988 -62906663 - ORR1B1-int LTR MaLR -757 752 624 7 831 1577 31 0 45 chr17 32365988 32366189 -62906462 - B2_Mm1a SINE B2 0 193 2 7 831 348 213 7 34 chr17 32366189 32366201 -62906450 - ORR1B1-int LTR MaLR -886 623 612 7 831 300 342 68 0 chr17 32366874 32366991 -62905660 + PB1 SINE Alu 3 127 0 7 831 281 204 0 39 chr17 32366996 32367047 -62905604 + ID4_ SINE ID 1 49 -34 7 831 1217 27 7 27 chr17 32367491 32367641 -62905010 + B1_Mus2 SINE Alu 1 147 0 7 831 240 35 0 0 chr17 32367857 32367886 -62904765 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 7 831 23 33 0 0 chr17 32368367 32368397 -62904254 + AT_rich Low_complexity Low_complexity 1 30 0 7 831 297 376 76 33 chr17 32368906 32369181 -62903470 + MER119 DNA MER1_type 115 401 -182 7 831 211 211 0 0 chr17 32369562 32369600 -62903051 - B4A SINE B4 -231 61 24 7 831 228 35 0 0 chr17 32370602 32370631 -62902020 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 7 831 859 212 72 59 chr17 32370747 32371053 -62901598 + Lx9 LINE L1 5772 6094 -1550 7 831 198 0 0 0 chr17 32371111 32371133 -62901518 + (CATA)n Simple_repeat Simple_repeat 4 25 0 7 831 4202 196 127 76 chr17 32371152 32372095 -62900556 + Lx9 LINE L1 6376 7421 -223 7 831 1643 26 0 20 chr17 32372095 32372291 -62900360 + B2_Mm1a SINE B2 2 193 0 7 831 234 281 0 0 chr17 32372299 32372363 -62900288 + ORR1D-int LTR MaLR 363 426 -944 7 831 4202 196 127 76 chr17 32372363 32372555 -62900096 + Lx9 LINE L1 7430 7644 0 7 831 747 177 35 0 chr17 32373586 32373727 -62898924 - B1_Mus2 SINE Alu -1 146 1 7 831 855 146 0 0 chr17 32373739 32373883 -62898768 + (CA)n Simple_repeat Simple_repeat 1 144 0 7 831 1282 83 32 37 chr17 32373888 32374076 -62898575 + B2_Mm2 SINE B2 2 188 -7 7 831 1071 89 7 14 chr17 32374159 32374307 -62898344 + B1_Mus2 SINE Alu 1 147 0 7 831 180 200 0 0 chr17 32374309 32374349 -62898302 + A-rich Low_complexity Low_complexity 1 40 0 7 831 636 175 32 40 chr17 32374509 32374634 -62898017 - B1_Mur2 SINE Alu -10 139 16 7 103 720 238 47 13 chr17 32374687 32374836 -62897815 - B3 SINE B2 -5 211 58 7 832 919 118 81 0 chr17 32375187 32375323 -62897328 + B1_Mus2 SINE Alu 1 147 0 7 832 325 304 81 81 chr17 32375911 32376047 -62896604 + ID_B1 SINE B4 89 224 0 7 832 3237 130 122 62 chr17 32376266 32376648 -62896003 + Lx5 LINE L1 6183 6590 -468 7 832 3336 43 5 2 chr17 32376648 32377043 -62895608 + MTA_Mm LTR MaLR 1 396 0 7 832 3237 139 131 62 chr17 32377043 32377433 -62895218 + Lx5 LINE L1 6567 7042 -16 7 832 202 216 0 38 chr17 32377564 32377591 -62895060 + A-rich Low_complexity Low_complexity 1 26 0 7 832 1020 66 73 0 chr17 32377591 32377727 -62894924 + B1_Mus2 SINE Alu 2 147 0 7 832 202 216 0 38 chr17 32377727 32377752 -62894899 + A-rich Low_complexity Low_complexity 27 51 0 7 832 1624 143 80 20 chr17 32377820 32378119 -62894532 - ORR1A4 LTR MaLR -8 321 5 7 832 1371 51 17 0 chr17 32378555 32378731 -62893920 + B2_Mm1a SINE B2 1 179 -14 7 832 463 258 55 55 chr17 32378891 32379018 -62893633 + RSINE1 SINE B4 2 128 -37 7 832 222 217 0 0 chr17 32379801 32379847 -62892804 - B1_Mur4 SINE Alu -9 141 96 7 832 227 209 0 0 chr17 32379931 32379974 -62892677 - PB1D10 SINE Alu -33 84 42 7 832 817 251 5 40 chr17 32380224 32380448 -62892203 - B3 SINE B2 0 216 1 7 832 522 0 0 0 chr17 32380619 32380677 -62891974 + (TC)n Simple_repeat Simple_repeat 2 59 0 7 832 642 13 0 0 chr17 32380677 32380751 -62891900 + (TG)n Simple_repeat Simple_repeat 2 76 0 7 832 257 360 65 59 chr17 32380828 32381014 -62891637 - B4 SINE B4 -72 220 34 7 832 1049 85 78 0 chr17 32381578 32381731 -62890920 - B2_Mm2 SINE B2 -30 165 1 7 832 482 240 71 40 chr17 32382452 32382578 -62890073 + B3 SINE B2 1 130 -86 7 832 1182 103 68 11 chr17 32383105 32383281 -62889370 + B2_Mm2 SINE B2 1 186 -9 7 832 237 263 66 132 chr17 32383360 32383393 -62889258 + MT2B LTR ERVL 138 161 -440 7 832 648 157 85 16 chr17 32383393 32383522 -62889129 + B1_Mus2 SINE Alu 1 138 -9 7 832 23 0 0 0 chr17 32383522 32383545 -62889106 + GC_rich Low_complexity Low_complexity 1 23 0 7 832 313 205 11 108 chr17 32384188 32384209 -62888442 + MT2B LTR ERVL 148 231 -370 7 832 399 132 83 56 chr17 32384209 32384281 -62888370 + B1_Mus1 SINE Alu 2 75 -73 7 832 465 19 0 0 chr17 32384493 32384547 -62888104 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 7 832 1347 57 74 0 chr17 32384798 32384974 -62887677 + B2_Mm1a SINE B2 1 189 -4 7 832 1282 20 0 0 chr17 32384974 32385119 -62887532 + B1_Mus2 SINE Alu 1 146 -1 7 832 513 0 0 0 chr17 32385119 32385176 -62887475 + (GA)n Simple_repeat Simple_repeat 2 58 0 7 832 243 0 0 0 chr17 32385808 32385835 -62886816 + (CAAG)n Simple_repeat Simple_repeat 2 28 0 7 832 313 319 159 25 chr17 32385911 32386226 -62886425 - LTR73 LTR ERV1 -54 518 162 7 832 669 218 235 6 chr17 32386267 32386433 -62886218 - B3 SINE B2 -10 206 3 7 832 796 191 138 5 chr17 32386527 32386716 -62885935 - URR1A DNA MER1_type 0 226 13 7 832 1146 75 0 0 chr17 32386831 32386978 -62885673 + B1_Mus2 SINE Alu 1 147 0 7 832 431 134 129 181 chr17 32387448 32387603 -62885048 + B1_Mus1 SINE Alu 2 148 0 7 832 314 236 72 45 chr17 32387648 32387759 -62884892 + ID_B1 SINE B4 109 222 -2 7 832 605 44 75 32 chr17 32387670 32387763 -62884888 + B1_Mus2 SINE Alu 50 146 -1 7 832 564 281 118 45 chr17 32388144 32388561 -62884090 - L1MB3 LINE L1 -47 6127 5680 7 832 371 143 26 0 chr17 32388832 32388909 -62883742 + GA-rich Low_complexity Low_complexity 4 82 0 7 832 1469 176 77 52 chr17 32389368 32389768 -62882883 - RMER4B LTR ERVK -29 437 59 7 832 1198 49 0 0 chr17 32389768 32389906 -62882745 + B1_Mus2 SINE Alu 1 138 -9 7 832 194 0 39 0 chr17 32389906 32389932 -62882719 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 832 1469 162 83 38 chr17 32389932 32389982 -62882669 - RMER4B LTR ERVK -527 58 4 7 832 562 134 0 49 chr17 32390661 32390763 -62881888 + B1_Mur3 SINE Alu 40 136 -13 7 832 812 203 177 10 chr17 32391064 32391363 -62881288 + L1MC LINE L1 4036 4384 -1762 7 832 387 323 121 6 chr17 32391894 32392059 -62880592 - B3A SINE B2 -13 185 2 7 832 1330 80 11 0 chr17 32392336 32392512 -62880139 + B2_Mm1t SINE B2 1 178 -15 7 832 1268 38 0 0 chr17 32392513 32392672 -62879979 + B2_Mm1a SINE B2 2 160 -33 8 832 285 29 0 0 chr17 32392672 32392706 -62879945 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 8 832 735 191 0 41 chr17 32392937 32393084 -62879567 + B1_Mur4 SINE Alu 1 141 -9 8 832 393 81 0 0 chr17 32393095 32393157 -62879494 + (CA)n Simple_repeat Simple_repeat 1 62 0 8 832 234 236 36 0 chr17 32393166 32393221 -62879430 + ID_B1 SINE B4 86 142 -82 8 832 764 204 63 77 chr17 32393330 32393537 -62879114 + B3 SINE B2 11 214 -2 8 832 779 254 26 11 chr17 32393992 32394183 -62878468 - B3 SINE B2 -21 195 2 8 832 288 274 99 45 chr17 32394294 32394354 -62878297 - B3 SINE B2 -99 117 62 8 832 5624 98 28 32 chr17 32394354 32395264 -62877387 + RMER17A2 LTR ERVK 1 906 0 8 832 288 274 99 45 chr17 32395264 32395314 -62877337 - B3 SINE B2 -155 61 1 8 832 863 49 189 0 chr17 32395759 32395881 -62876770 + B1_Mus2 SINE Alu 2 146 -1 8 832 327 226 40 61 chr17 32395900 32395999 -62876652 + B4A SINE B4 73 169 -123 8 832 468 177 10 30 chr17 32395927 32396026 -62876625 + B1_Mus1 SINE Alu 12 108 -40 8 832 283 224 23 180 chr17 32395996 32396135 -62876516 + B3A SINE B2 81 195 0 8 832 858 45 0 0 chr17 32396240 32396351 -62876300 + B1_Mus2 SINE Alu 24 134 -13 8 832 926 204 50 5 chr17 32396374 32396576 -62876075 + B3 SINE B2 1 211 -5 8 832 679 224 0 39 chr17 32396596 32396749 -62875902 + B1_Mur2 SINE Alu 3 149 0 8 832 970 196 85 10 chr17 32396754 32396955 -62875696 + B3 SINE B2 1 216 0 8 832 258 303 174 41 chr17 32396975 32397171 -62875480 + ID_B1 SINE B4 1 222 -2 8 832 561 263 57 32 chr17 32397231 32397388 -62875263 + B3 SINE B2 2 162 -54 8 832 1038 119 37 73 chr17 32397618 32397809 -62874842 + B2_Mm1t SINE B2 2 185 -8 8 832 258 148 0 0 chr17 32397820 32397874 -62874777 - BGLII_B LTR ERVK -385 56 3 8 832 749 241 110 34 chr17 32397928 32398220 -62874431 + BGLII_B LTR ERVK 99 431 -10 8 832 1701 16 0 15 chr17 32398330 32398526 -62874125 + B2_Mm1a SINE B2 1 193 0 8 832 1047 90 20 7 chr17 32398543 32398689 -62873962 + B1_Mus1 SINE Alu 1 148 0 8 832 292 200 0 41 chr17 32398836 32398909 -62873742 + B1_Mus1 SINE Alu 2 71 -77 8 832 353 297 114 23 chr17 32399187 32399305 -62873346 + PB1 SINE Alu 2 123 -4 8 832 1663 32 0 0 chr17 32399416 32399605 -62873046 + B2_Mm1a SINE B2 1 189 -4 8 832 788 176 0 75 chr17 32399614 32399774 -62872877 + B1_Mur4 SINE Alu 2 149 -1 8 832 222 62 0 0 chr17 32400135 32400167 -62872484 + (TG)n Simple_repeat Simple_repeat 1 32 0 8 832 590 294 62 47 chr17 32400183 32400376 -62872275 - B4 SINE B4 -17 275 80 8 832 1678 26 0 0 chr17 32400389 32400578 -62872073 + B2_Mm1t SINE B2 2 190 -3 8 832 188 0 74 0 chr17 32400582 32400609 -62872042 + (TAAAAA)n Simple_repeat Simple_repeat 2 30 0 8 832 417 229 46 28 chr17 32401179 32401287 -62871364 - RSINE1 SINE B4 -29 136 27 8 832 1118 65 0 0 chr17 32401527 32401665 -62870986 + B1_Mus1 SINE Alu 1 138 -10 8 832 216 0 0 0 chr17 32401665 32401689 -62870962 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 8 832 192 125 0 0 chr17 32401825 32401857 -62870794 + (CCTA)n Simple_repeat Simple_repeat 2 33 0 8 832 263 93 0 23 chr17 32401850 32401894 -62870757 + (CCCCCT)n Simple_repeat Simple_repeat 3 45 0 8 832 957 61 15 44 chr17 32401899 32402036 -62870615 - B1_Mus1 SINE Alu -15 133 1 8 832 342 301 80 0 chr17 32402316 32402429 -62870222 + B1F1 SINE Alu 1 122 -27 8 832 225 257 68 107 chr17 32402435 32402640 -62870011 + L1MB2 LINE L1 5567 5763 -421 8 832 369 0 0 0 chr17 32402860 32402901 -62869750 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 8 832 181 159 106 64 chr17 32403030 32403077 -62869574 - L2 LINE L2 -535 2884 2836 8 832 329 202 113 19 chr17 32403123 32403229 -62869422 - PB1D9 SINE Alu -1 119 4 8 832 355 210 0 0 chr17 32403524 32403586 -62869065 + B1_Mur1 SINE Alu 57 118 -31 8 832 1002 168 53 19 chr17 32403587 32403794 -62868857 + B3 SINE B2 3 216 0 8 832 292 174 127 93 chr17 32403828 32403984 -62868667 + L1MB2 LINE L1 5821 5981 -190 8 832 526 267 47 20 chr17 32404019 32404168 -62868483 + RSINE1 SINE B4 3 155 -10 8 832 1060 85 14 0 chr17 32404399 32404540 -62868111 + B1_Mur4 SINE Alu 1 143 -7 8 832 468 256 8 0 chr17 32405554 32405671 -62866980 + B1F2 SINE Alu 3 120 -29 8 832 1054 77 21 0 chr17 32406099 32406242 -62866409 + B1_Mus1 SINE Alu 3 148 0 8 832 625 270 101 6 chr17 32406267 32406446 -62866205 + B3 SINE B2 4 199 -17 8 832 503 235 25 34 chr17 32406455 32406574 -62866077 - B1_Mur1 SINE Alu -31 118 1 8 832 311 98 0 16 chr17 32406574 32406636 -62866015 + (CAAA)n Simple_repeat Simple_repeat 4 64 0 8 832 1157 41 13 33 chr17 32406836 32406986 -62865665 + B1_Mus2 SINE Alu 1 147 0 8 832 874 148 65 0 chr17 32407022 32407177 -62865474 + B2_Mm2 SINE B2 1 165 -30 8 832 212 167 0 0 chr17 32407179 32407215 -62865436 + GA-rich Low_complexity Low_complexity 1 36 0 8 832 416 236 34 0 chr17 32407489 32407578 -62865073 - PB1D10 SINE Alu -14 103 12 8 832 683 164 70 0 chr17 32407920 32408048 -62864603 + B1_Mur3 SINE Alu 13 149 0 8 832 257 265 66 96 chr17 32408485 32408652 -62863999 + MIR SINE MIR 39 200 -62 8 832 870 221 14 66 chr17 32409151 32409364 -62863287 - B3 SINE B2 -14 202 1 8 832 225 0 0 0 chr17 32409377 32409402 -62863249 + (A)n Simple_repeat Simple_repeat 1 25 0 8 832 313 47 0 0 chr17 32410880 32410923 -62861728 - B1_Mus1 SINE Alu -105 43 1 8 832 863 40 168 8 chr17 32411066 32411191 -62861460 + B1_Mm SINE Alu 3 147 0 8 832 328 302 66 0 chr17 32411485 32411591 -62861060 - PB1D10 SINE Alu -4 113 1 8 832 248 357 0 0 chr17 32411637 32411707 -62860944 - ID4_ SINE ID -2 81 12 8 832 580 125 17 59 chr17 32411776 32411895 -62860756 - B1_Mur4 SINE Alu 0 150 37 8 832 242 186 222 28 chr17 32411840 32411912 -62860739 - 4.5SRNA scRNA scRNA -8 86 1 8 832 304 129 135 54 chr17 32413236 32413310 -62859341 - PB1D9 SINE Alu 0 120 41 8 832 1217 75 92 0 chr17 32413522 32413696 -62858955 + B2_Mm2 SINE B2 5 194 -1 8 832 243 252 90 36 chr17 32414265 32414376 -62858275 + PB1D10 SINE Alu 1 117 0 8 832 225 167 143 0 chr17 32414553 32414595 -62858056 + ID4_ SINE ID 8 55 -28 8 832 1237 34 0 7 chr17 32414676 32414824 -62857827 + B1_Mus2 SINE Alu 1 147 0 8 832 237 182 0 0 chr17 32414825 32414880 -62857771 + A-rich Low_complexity Low_complexity 1 55 0 8 832 327 204 147 55 chr17 32414902 32415011 -62857640 - PB1D9 SINE Alu 0 120 2 8 832 1179 68 0 7 chr17 32415069 32415217 -62857434 - B1_Mus1 SINE Alu 0 148 2 8 832 1105 56 21 0 chr17 32415324 32415467 -62857184 + B1_Mm SINE Alu 1 146 -1 8 832 321 109 0 0 chr17 32415468 32415523 -62857128 + (A)n Simple_repeat Simple_repeat 1 55 0 8 832 233 278 68 14 chr17 32415878 32415897 -62856754 + B4 SINE B4 64 86 -206 8 832 513 183 96 0 chr17 32415897 32416012 -62856639 + B1_Mus2 SINE Alu 2 127 -20 8 832 315 0 0 0 chr17 32416014 32416049 -62856602 + (TGAA)n Simple_repeat Simple_repeat 4 38 0 8 832 693 197 35 7 chr17 32416049 32416192 -62856459 + B1_Mus1 SINE Alu 2 148 0 8 832 387 201 365 0 chr17 32416259 32416401 -62856250 + B3A SINE B2 16 209 -7 8 832 29 0 0 0 chr17 32416471 32416500 -62856151 + AT_rich Low_complexity Low_complexity 1 29 0 8 832 383 229 21 186 chr17 32416502 32416555 -62856096 + B1_Mur2 SINE Alu 2 39 -110 8 832 959 39 47 16 chr17 32416555 32416684 -62855967 + B1_Mm SINE Alu 1 133 -14 8 832 383 229 21 186 chr17 32416684 32416775 -62855876 + B1_Mur2 SINE Alu 40 122 -27 8 832 501 231 42 17 chr17 32416915 32417034 -62855617 + ID_B1 SINE B4 2 123 -101 8 832 258 229 65 39 chr17 32417115 32417237 -62855414 + L1M4 LINE L1 5572 5695 -483 8 832 1131 51 0 7 chr17 32417425 32417564 -62855087 + B1_Mm SINE Alu 1 138 -9 8 832 240 35 0 0 chr17 32417564 32417593 -62855058 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 8 832 376 169 92 12 chr17 32418144 32418243 -62854408 - B1_Mus2 SINE Alu -7 113 1 8 832 333 228 31 69 chr17 32418273 32418384 -62854267 - B1F2 SINE Alu -43 106 5 8 832 477 47 0 0 chr17 32418448 32418512 -62854139 + (TG)n Simple_repeat Simple_repeat 1 64 0 8 832 212 274 26 40 chr17 32418513 32418589 -62854062 - B3A SINE B2 -31 167 93 8 832 359 155 121 8 chr17 32418694 32418777 -62853874 + PB1D7 SINE Alu 29 112 -8 8 832 469 263 45 0 chr17 32418806 32418939 -62853712 + B3 SINE B2 37 175 -41 8 832 1026 73 7 0 chr17 32419676 32419813 -62852838 - B1_Mm SINE Alu -9 138 1 8 832 1151 81 128 0 chr17 32419878 32420050 -62852601 - B2_Mm2 SINE B2 0 195 2 8 832 261 0 0 0 chr17 32421045 32421074 -62851577 + (TCC)n Simple_repeat Simple_repeat 2 30 0 8 832 272 205 12 24 chr17 32421115 32421200 -62851451 + C-rich Low_complexity Low_complexity 5 88 0 8 832 24 67 0 0 chr17 32421397 32421442 -62851209 + GC_rich Low_complexity Low_complexity 1 45 0 8 832 204 238 11 35 chr17 32421520 32421607 -62851044 + (CCG)n Simple_repeat Simple_repeat 3 87 0 8 832 681 44 0 0 chr17 32422033 32422123 -62850528 - BC1_Mm scRNA scRNA -62 90 1 9 832 281 272 0 31 chr17 32422388 32422402 -62850249 - ID_B1 SINE B4 -62 162 130 9 832 283 299 0 0 chr17 32422402 32422469 -62850182 - PB1D10 SINE Alu -48 69 3 9 832 281 272 0 31 chr17 32422469 32422493 -62850158 - ID_B1 SINE B4 -62 129 65 9 832 653 231 54 0 chr17 32422669 32422799 -62849852 - B1_Mm SINE Alu -6 141 5 9 832 498 108 0 0 chr17 32422847 32422921 -62849730 + (TA)n Simple_repeat Simple_repeat 1 74 0 9 832 252 0 0 0 chr17 32422921 32422948 -62849703 + (GA)n Simple_repeat Simple_repeat 2 29 0 9 832 1502 69 0 11 chr17 32423055 32423245 -62849406 + B2_Mm1a SINE B2 1 188 -5 9 832 294 185 106 15 chr17 32423252 32423318 -62849333 + RSINE1 SINE B4 4 75 -90 9 832 33 0 0 0 chr17 32423331 32423364 -62849287 + AT_rich Low_complexity Low_complexity 1 33 0 9 832 393 22 0 0 chr17 32423588 32423634 -62849017 + (CA)n Simple_repeat Simple_repeat 2 47 0 9 832 704 67 221 0 chr17 32423634 32423738 -62848913 - B1_Mus2 SINE Alu -19 128 2 9 832 403 35 53 0 chr17 32423829 32423886 -62848765 + B1_Mus2 SINE Alu 65 124 -23 9 832 213 213 16 47 chr17 32423901 32423965 -62848686 + RSINE1 SINE B4 71 132 -33 9 832 226 281 35 105 chr17 32424024 32424044 -62848607 + MT2B LTR ERVL 149 167 -434 9 832 1355 69 0 28 chr17 32424044 32424224 -62848427 + B2_Mm2 SINE B2 2 176 -19 9 832 520 227 0 9 chr17 32424230 32424341 -62848310 + B1_Mur1 SINE Alu 11 120 -29 9 832 506 175 110 8 chr17 32424356 32424483 -62848168 - B1_Mur4 SINE Alu -1 149 10 9 832 1122 61 0 39 chr17 32424525 32424678 -62847973 + B1_Mm SINE Alu 1 147 0 9 832 422 182 76 19 chr17 32424864 32424974 -62847677 + B1_Mus2 SINE Alu 9 119 -1 9 832 545 64 13 0 chr17 32424995 32425073 -62847578 + B2_Mm1t SINE B2 1 79 -114 9 832 828 61 17 0 chr17 32425074 32425189 -62847462 + B1_Mm SINE Alu 31 147 0 9 832 377 131 153 12 chr17 32425287 32425372 -62847279 - B1_Mus2 SINE Alu -2 145 49 9 832 326 269 0 13 chr17 32425679 32425758 -62846893 - ID4 SINE ID -3 80 3 9 832 22 70 0 0 chr17 32425762 32425805 -62846846 + AT_rich Low_complexity Low_complexity 1 43 0 9 832 456 179 0 35 chr17 32425812 32425899 -62846752 - B1F1 SINE Alu -56 93 10 9 832 246 258 0 16 chr17 32425850 32425913 -62846738 - B4A SINE B4 -149 143 82 9 832 228 122 0 0 chr17 32425917 32425958 -62846693 + (T)n Simple_repeat Simple_repeat 1 41 0 9 832 1257 41 0 0 chr17 32425958 32426105 -62846546 - B1_Mm SINE Alu 0 147 1 9 832 1423 88 0 20 chr17 32426107 32426303 -62846348 - B2_Mm2 SINE B2 -2 193 2 9 832 573 207 17 8 chr17 32426381 32426498 -62846153 + PB1D9 SINE Alu 3 120 0 9 832 1412 76 27 0 chr17 32426503 32426687 -62845964 + B2_Mm1a SINE B2 1 189 -4 9 832 642 278 0 0 chr17 32426842 32427004 -62845647 - ID_B1 SINE B4 -29 195 34 9 832 517 116 533 8 chr17 32427006 32427128 -62845523 + B2_Mm1a SINE B2 2 187 -6 9 832 976 101 34 0 chr17 32427128 32427277 -62845374 - B2_Mm2 SINE B2 -41 154 1 9 832 1100 95 0 7 chr17 32427298 32427447 -62845204 - B1_Mus1 SINE Alu 0 148 1 9 832 21 0 0 0 chr17 32427465 32427486 -62845165 + AT_rich Low_complexity Low_complexity 1 21 0 9 832 252 164 0 68 chr17 32427592 32427651 -62845000 + B2_Mm2 SINE B2 47 101 -94 9 832 200 0 0 91 chr17 32427673 32427706 -62844945 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 9 832 542 135 0 0 chr17 32427937 32428026 -62844625 - RLTR26 LTR ERVK 0 642 554 9 832 1908 175 88 52 chr17 32428040 32428517 -62844134 - RLTR26 LTR ERVK -144 498 5 9 832 1064 200 15 10 chr17 32428517 32428719 -62843932 - B3 SINE B2 -13 203 1 9 832 1281 94 28 0 chr17 32428830 32429011 -62843640 + B2_Mm1t SINE B2 2 187 -6 9 832 490 270 102 18 chr17 32429052 32429218 -62843433 + B3A SINE B2 3 182 -16 9 832 36 40 0 0 chr17 32429231 32429281 -62843370 + AT_rich Low_complexity Low_complexity 1 50 0 9 832 919 79 0 0 chr17 32429398 32429524 -62843127 + B1_Mus1 SINE Alu 2 127 -21 9 832 38 22 0 0 chr17 32429524 32429569 -62843082 + AT_rich Low_complexity Low_complexity 1 45 0 9 832 643 241 159 17 chr17 32429649 32429881 -62842770 - RMER15 LTR ERVL -26 549 285 9 832 280 94 57 0 chr17 32429936 32429989 -62842662 - RMER15 LTR ERVL -458 117 62 9 832 555 226 15 9 chr17 32430022 32430161 -62842490 - B1_Mur2 SINE Alu 0 150 8 9 832 1321 98 38 0 chr17 32430375 32430559 -62842092 - B2_Mm1t SINE B2 -2 191 1 9 832 205 152 0 0 chr17 32430656 32430689 -62841962 + GA-rich Low_complexity Low_complexity 2 34 0 9 832 626 225 49 7 chr17 32430837 32430980 -62841671 - B1_Mur4 SINE Alu 0 150 2 9 832 309 309 22 54 chr17 32431013 32431035 -62841616 - B3 SINE B2 0 216 197 9 832 2277 84 63 50 chr17 32431035 32431397 -62841254 - L1Md_F2 LINE L1 -1 6581 6215 9 832 1029 110 0 0 chr17 32431397 32431543 -62841108 - B1_Mus2 SINE Alu -1 146 1 9 832 401 277 25 32 chr17 32431543 32431704 -62840947 - B3A SINE B2 -20 196 38 9 832 454 191 10 21 chr17 32431707 32431803 -62840848 - B3 SINE B2 -109 107 13 9 832 591 102 0 0 chr17 32431804 32431892 -62840759 + B1_Mus2 SINE Alu 1 88 -59 9 832 278 130 43 0 chr17 32431885 32431931 -62840720 - PB1D9 SINE Alu -59 61 14 9 832 198 71 0 0 chr17 32431997 32432025 -62840626 + (ATTTG)n Simple_repeat Simple_repeat 2 29 0 9 832 694 197 23 8 chr17 32432032 32432160 -62840491 - B1_Mus1 SINE Alu -18 130 1 9 832 292 241 0 0 chr17 32432196 32432254 -62840397 - ID SINE ID -145 79 22 9 832 475 313 14 0 chr17 32432315 32432462 -62840189 - ID_B1 SINE B4 -1 223 75 9 832 226 266 0 144 chr17 32432471 32432603 -62840048 + MT2B2 LTR ERVL 152 264 -320 9 832 627 228 8 0 chr17 32432501 32432628 -62840023 + B1_Mur2 SINE Alu 12 139 -10 9 832 1088 82 0 20 chr17 32432680 32432830 -62839821 - B1_Mm SINE Alu 0 147 1 9 832 1460 164 8 132 chr17 32432882 32433275 -62839376 + RLTR11B LTR ERVK 9 352 -101 9 832 640 103 0 0 chr17 32433275 32433372 -62839279 + B2_Mm2 SINE B2 1 97 -98 9 832 189 0 0 0 chr17 32433373 32433394 -62839257 + (T)n Simple_repeat Simple_repeat 1 21 0 9 832 1228 54 0 0 chr17 32433394 32433541 -62839110 - B1_Mm SINE Alu 0 147 1 9 832 286 361 17 0 chr17 32433564 32433683 -62838968 + ID_B1 SINE B4 84 204 -20 9 832 873 219 52 10 chr17 32433690 32433884 -62838767 + B3 SINE B2 2 203 -13 9 832 21 0 0 0 chr17 32433915 32433936 -62838715 + AT_rich Low_complexity Low_complexity 1 21 0 9 832 582 201 29 15 chr17 32434020 32434156 -62838495 + B1_Mur3 SINE Alu 12 149 0 9 832 1485 48 26 0 chr17 32434237 32434426 -62838225 - B2_Mm2 SINE B2 0 195 2 9 832 258 292 52 10 chr17 32434453 32434550 -62838101 - PB1D10 SINE Alu -16 101 1 9 832 610 232 14 42 chr17 32434693 32434837 -62837814 - B1_Mur1 SINE Alu 0 149 10 9 832 780 238 10 54 chr17 32434868 32434901 -62837750 - B3A SINE B2 -3 195 164 9 832 225 0 0 0 chr17 32434901 32434926 -62837725 + (CA)n Simple_repeat Simple_repeat 2 26 0 9 832 780 238 10 54 chr17 32434926 32435096 -62837555 - B3A SINE B2 -35 163 2 9 832 521 209 51 57 chr17 32435156 32435313 -62837338 - B3 SINE B2 0 216 61 9 832 376 280 0 17 chr17 32435483 32435603 -62837048 - RSINE1 SINE B4 -15 150 33 9 832 216 0 0 0 chr17 32435763 32435787 -62836864 + (CA)n Simple_repeat Simple_repeat 2 25 0 9 832 1081 84 0 7 chr17 32435790 32435934 -62836717 + B1_Mus2 SINE Alu 5 147 0 9 832 180 0 0 0 chr17 32435944 32435964 -62836687 + (A)n Simple_repeat Simple_repeat 1 20 0 9 832 186 43 0 0 chr17 32435966 32435989 -62836662 + (CA)n Simple_repeat Simple_repeat 2 24 0 9 832 1129 58 0 0 chr17 32435994 32436132 -62836519 + B1_Mm SINE Alu 1 138 -9 9 832 234 0 0 0 chr17 32436132 32436158 -62836493 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 9 832 686 248 0 0 chr17 32436169 32436314 -62836337 - B1_Mus1 SINE Alu -1 147 3 9 832 632 214 8 22 chr17 32436355 32436489 -62836162 + B1_Mus1 SINE Alu 5 136 -12 9 832 248 0 31 0 chr17 32436495 32436527 -62836124 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 9 832 1140 136 17 6 chr17 32436527 32436705 -62835946 + B2_Mm2 SINE B2 2 181 -14 9 832 302 137 0 19 chr17 32436780 32436832 -62835819 + B2_Mm2 SINE B2 51 101 -94 9 832 783 190 245 12 chr17 32437099 32437344 -62835307 - RLTR28 LTR ERVL -12 512 211 9 832 983 52 0 7 chr17 32437342 32437479 -62835172 + B1_Mus1 SINE Alu 12 147 -1 9 832 862 142 152 5 chr17 32437488 32437672 -62834979 - RLTR28 LTR ERVL -313 211 1 9 832 1396 106 5 0 chr17 32437780 32437969 -62834682 - B2_Mm2 SINE B2 -4 191 2 9 832 424 244 25 34 chr17 32437971 32438090 -62834561 - PB1D7 SINE Alu 0 120 3 9 832 508 235 68 0 chr17 32438094 32438226 -62834425 - B1_Mur1 SINE Alu -7 142 2 9 832 226 262 119 0 chr17 32438357 32438441 -62834210 + L1MB5 LINE L1 6046 6139 -35 9 832 729 97 262 27 chr17 32438444 32438593 -62834058 + B2_Mm1t SINE B2 1 184 -9 9 832 382 298 95 47 chr17 32438674 32438843 -62833808 + ID_B1 SINE B4 46 222 -2 9 832 231 236 19 6 chr17 32439204 32439261 -62833390 - ID4 SINE ID -67 85 31 9 832 1227 48 0 0 chr17 32439414 32439560 -62833091 - B1_Mus2 SINE Alu 0 147 2 9 832 215 254 146 0 chr17 32439580 32439635 -62833016 + PB1D9 SINE Alu 40 102 -18 9 832 249 198 191 34 chr17 32439837 32439926 -62832725 + B1_Mur3 SINE Alu 34 136 -13 9 832 1122 90 6 23 chr17 32439942 32440113 -62832538 - B2_Mm1t SINE B2 -24 169 2 1 832 996 91 28 0 chr17 32440135 32440278 -62832373 - B1_Mm SINE Alu 0 147 1 1 832 189 0 0 0 chr17 32440315 32440336 -62832315 + (T)n Simple_repeat Simple_repeat 1 21 0 1 832 231 255 0 52 chr17 32440393 32440451 -62832200 + RSINE1 SINE B4 26 80 -85 1 832 540 0 0 0 chr17 32440525 32440585 -62832066 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 832 358 250 69 10 chr17 32441325 32441426 -62831225 + PB1D10 SINE Alu 1 107 -10 1 832 1168 69 0 0 chr17 32441466 32441611 -62831040 + B1_Mus2 SINE Alu 1 145 -2 1 832 269 269 95 9 chr17 32443005 32443121 -62829530 - PB1 SINE Alu 0 127 2 1 832 21 0 0 0 chr17 32443308 32443329 -62829322 + AT_rich Low_complexity Low_complexity 1 21 0 1 832 528 246 115 48 chr17 32443703 32443912 -62828739 + MTE2a LTR MaLR 155 377 -2 1 832 257 0 28 0 chr17 32443912 32443947 -62828704 + B1_Mus2 SINE Alu 111 146 -1 1 832 387 248 13 19 chr17 32444098 32444210 -62828441 + B1_Mur1 SINE Alu 5 147 -2 1 832 862 224 27 54 chr17 32444506 32444728 -62827923 + B3 SINE B2 1 216 0 1 832 1028 56 0 0 chr17 32444740 32444865 -62827786 + B1_Mm SINE Alu 21 145 -2 1 832 207 0 0 0 chr17 32444865 32444888 -62827763 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 1 832 474 267 35 0 chr17 32444921 32445037 -62827614 + PB1D9 SINE Alu 1 120 0 1 832 297 310 142 25 chr17 32445187 32445452 -62827199 - MER2 DNA MER2_type -19 326 2 1 832 229 71 71 0 chr17 32445477 32445519 -62827132 - B2_Mm2 SINE B2 -14 181 137 1 832 705 122 0 27 chr17 32445685 32445795 -62826856 + B2_Mm2 SINE B2 1 107 -88 1 832 245 148 291 58 chr17 32446039 32446125 -62826526 + PB1D9 SINE Alu 2 107 -13 1 832 556 246 71 14 chr17 32446824 32446964 -62825687 - B1_Mur2 SINE Alu -1 148 1 1 832 345 214 28 14 chr17 32446980 32447051 -62825600 - B3 SINE B2 -23 193 122 1 832 578 250 92 7 chr17 32447053 32447206 -62825445 - B3 SINE B2 -50 166 1 1 832 671 235 77 12 chr17 32447308 32447476 -62825175 - B3 SINE B2 -4 212 34 1 832 1177 44 0 0 chr17 32448145 32448281 -62824370 + B1_Mus2 SINE Alu 2 137 -10 1 832 1130 63 28 0 chr17 32451902 32452045 -62820606 + B1_Mus2 SINE Alu 1 147 0 1 832 316 270 78 16 chr17 32452079 32452207 -62820444 + Lx6 LINE L1 7299 7434 -26 1 832 180 111 0 0 chr17 32452309 32452336 -62820315 + (GAAAA)n Simple_repeat Simple_repeat 1 27 0 1 832 297 228 42 42 chr17 32452890 32452986 -62819665 + L1MB5 LINE L1 5880 5975 -199 1 832 324 345 70 7 chr17 32455324 32455467 -62817184 + MER58B DNA MER1_type 2 153 -188 1 832 261 0 0 0 chr17 32455959 32455988 -62816663 + (A)n Simple_repeat Simple_repeat 1 29 0 1 832 1325 92 32 0 chr17 32456472 32456657 -62815994 + B2_Mm1a SINE B2 1 191 -2 1 832 264 122 0 0 chr17 32456657 32456698 -62815953 + (TTC)n Simple_repeat Simple_repeat 2 42 0 1 832 1155 69 14 0 chr17 32456700 32456845 -62815806 - B1_Mm SINE Alu 0 147 1 1 832 780 223 69 5 chr17 32459276 32459479 -62813172 + B3 SINE B2 1 216 0 1 832 238 288 0 132 chr17 32459510 32459586 -62813065 + ID4_ SINE ID 4 69 -14 1 832 613 169 107 33 chr17 32459639 32459761 -62812890 + B1_Mur3 SINE Alu 2 132 -17 1 832 496 300 80 0 chr17 32459825 32459975 -62812676 + RSINE1 SINE B4 2 163 -2 1 832 453 314 43 0 chr17 32460027 32460042 -62812609 + ID_B1 SINE B4 76 221 -3 1 832 481 228 120 16 chr17 32460042 32460167 -62812484 + B1_Mus1 SINE Alu 11 148 0 1 832 1049 52 74 0 chr17 32460385 32460520 -62812131 - B1_Mus2 SINE Alu 0 147 3 1 832 229 189 0 19 chr17 32460628 32460682 -62811969 - PB1D10 SINE Alu 0 117 65 1 832 428 214 87 20 chr17 32460703 32460819 -62811832 - B1F SINE Alu -2 147 26 1 832 234 366 84 0 chr17 32460831 32460902 -62811749 - PB1D10 SINE Alu -37 80 4 1 832 456 260 30 0 chr17 32460989 32461089 -62811562 - RSINE1 SINE B4 -60 105 3 1 832 269 344 0 0 chr17 32461458 32461548 -62811103 + PB1 SINE Alu 13 102 -25 1 832 1255 41 0 0 chr17 32461772 32461917 -62810734 - B1_Mus2 SINE Alu -1 146 2 1 832 1363 60 16 32 chr17 32462049 32462237 -62810414 + B2_Mm2 SINE B2 2 186 -9 1 832 769 214 28 0 chr17 32462305 32462450 -62810201 - B1_Mur4 SINE Alu 0 150 2 1 832 32 0 0 0 chr17 32462455 32462487 -62810164 + AT_rich Low_complexity Low_complexity 1 32 0 1 832 1095 50 0 21 chr17 32462659 32462801 -62809850 - B1_Mus2 SINE Alu 0 147 9 1 832 700 180 32 45 chr17 32462664 32462821 -62809830 - ID_B1 SINE B4 -2 222 68 1 832 476 281 33 46 chr17 32463046 32463199 -62809452 + RSINE1 SINE B4 1 151 -14 1 832 1171 74 0 0 chr17 32463253 32463401 -62809250 + B1_Mus1 SINE Alu 1 148 0 1 832 265 300 0 28 chr17 32463654 32463726 -62808925 + ID4_ SINE ID 5 74 -9 1 832 460 180 0 43 chr17 32463989 32464082 -62808569 - B1_Mus1 SINE Alu -55 93 5 1 832 256 257 35 129 chr17 32464082 32464105 -62808546 - MT2B LTR ERVL -354 247 143 1 832 529 248 40 8 chr17 32464217 32464343 -62808308 + B1_Mur2 SINE Alu 19 148 -1 1 832 269 299 0 0 chr17 32464612 32464679 -62807972 - RSINE1 SINE B4 -37 128 62 1 832 1463 45 11 6 chr17 32464995 32465173 -62807478 + B2_Mm1t SINE B2 1 179 -14 1 832 345 91 355 9 chr17 32465186 32465296 -62807355 + B2_Mm2 SINE B2 47 194 -1 1 832 183 42 0 0 chr17 32465459 32465483 -62807168 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 832 1233 55 0 0 chr17 32465487 32465633 -62807018 - B1_Mm SINE Alu 0 147 2 1 832 441 217 0 12 chr17 32465685 32465702 -62806949 + B4 SINE B4 70 85 -207 1 832 537 156 11 11 chr17 32465702 32465793 -62806858 + B1_Mm SINE Alu 1 91 -56 1 832 284 293 66 6 chr17 32465865 32466047 -62806604 + L1M4c LINE L1 1285 1477 -4907 1 832 1306 97 23 0 chr17 32466147 32466323 -62806328 + B2_Mm2 SINE B2 2 181 -14 1 832 561 274 0 0 chr17 32466384 32466501 -62806150 - B1_Mur3 SINE Alu -31 118 2 1 832 1455 79 16 0 chr17 32466554 32466744 -62805907 + B2_Mm2 SINE B2 2 194 -1 1 832 418 281 180 21 chr17 32466849 32467038 -62805613 + L1M4c LINE L1 4776 4994 -1388 1 832 239 234 0 45 chr17 32467168 32467235 -62805416 + B1F SINE Alu 64 141 -8 1 832 258 282 12 60 chr17 32467235 32467318 -62805333 + ID4 SINE ID 4 82 -1 1 832 212 0 36 0 chr17 32467318 32467346 -62805305 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 832 507 240 70 0 chr17 32467385 32467485 -62805166 + B3A SINE B2 1 107 -91 1 832 450 0 0 0 chr17 32467520 32467570 -62805081 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 832 316 167 109 168 chr17 32467586 32467648 -62805003 + L1M4 LINE L1 5151 5200 -946 1 832 543 237 98 8 chr17 32467648 32467780 -62804871 + B1_Mur2 SINE Alu 1 144 -5 1 832 316 167 109 168 chr17 32467780 32467854 -62804797 + L1M4 LINE L1 5201 5279 -867 1 832 348 257 43 0 chr17 32467862 32467932 -62804719 + ID4_ SINE ID 7 79 -4 1 832 628 310 38 29 chr17 32468318 32468527 -62804124 - B4A SINE B4 0 292 82 1 832 740 247 18 18 chr17 32468521 32468690 -62803961 + MTEa LTR MaLR 208 376 -3 1 832 563 189 0 0 chr17 32469000 32469089 -62803562 - PB1D9 SINE Alu -18 102 14 1 832 612 26 0 13 chr17 32469089 32469167 -62803484 + B1_Mus1 SINE Alu 1 77 -71 1 832 288 229 0 150 chr17 32469091 32469204 -62803447 + MT2B2 LTR ERVL 167 262 -322 1 832 533 76 0 12 chr17 32474030 32474062 -62798589 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 832 567 0 0 0 chr17 32474062 32474125 -62798526 + (TTCC)n Simple_repeat Simple_repeat 2 64 0 1 832 533 76 0 12 chr17 32474125 32474172 -62798479 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 832 1241 49 0 0 chr17 32474176 32474318 -62798333 - B1_Mus2 SINE Alu -4 143 2 1 832 732 164 86 14 chr17 32474632 32474803 -62797848 - B3 SINE B2 -5 190 1 1 832 303 305 201 21 chr17 32476500 32476644 -62796007 + RMER15 LTR ERVL 403 572 -3 1 832 492 329 14 0 chr17 32476774 32476914 -62795737 + B1F SINE Alu 1 142 -7 1 832 421 206 46 64 chr17 32476914 32477023 -62795628 + B1_Mur1 SINE Alu 37 143 -6 1 832 360 198 53 95 chr17 32478241 32478336 -62794315 - PB1D9 SINE Alu -29 91 1 1 832 322 322 0 0 chr17 32478363 32478481 -62794170 + PB1D7 SINE Alu 1 118 -2 1 832 230 133 0 5 chr17 32478563 32478608 -62794043 + B3 SINE B2 2 45 -153 1 832 546 29 0 0 chr17 32478672 32478740 -62793911 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 1 832 1374 80 32 0 chr17 32478744 32478932 -62793719 + B2_Mm2 SINE B2 2 195 0 1 832 458 108 14 0 chr17 32478944 32479018 -62793633 + (GA)n Simple_repeat Simple_repeat 2 76 0 1 832 1821 211 92 92 chr17 32479055 32479588 -62793063 + MT2A LTR ERVL 1 533 0 1 832 226 351 42 42 chr17 32479598 32479717 -62792934 + B3 SINE B2 98 216 0 1 832 673 223 62 35 chr17 32479730 32479874 -62792777 + B1_Mur1 SINE Alu 2 149 0 1 832 612 180 155 8 chr17 32479962 32480091 -62792560 - B1_Mus1 SINE Alu 0 148 1 1 832 900 170 13 20 chr17 32480131 32480281 -62792370 + B1_Mur2 SINE Alu 1 149 0 1 832 1027 133 0 0 chr17 32480281 32480424 -62792227 + B1_Mus1 SINE Alu 1 143 -5 1 832 379 263 0 39 chr17 32480451 32480554 -62792097 + ID_B1 SINE B4 78 176 -48 1 832 595 183 5 30 chr17 32480462 32480596 -62792055 + PB1D9 SINE Alu 7 129 -20 1 832 615 171 0 0 chr17 32480596 32480725 -62791926 + GA-rich Low_complexity Low_complexity 2 130 0 1 832 809 203 86 81 chr17 32480741 32480950 -62791701 + B3 SINE B2 1 210 -6 1 832 962 160 7 0 chr17 32481000 32481144 -62791507 + B1_Mur4 SINE Alu 6 150 0 1 832 228 328 40 0 chr17 32481154 32481279 -62791372 + L1M5 LINE L1 4697 4826 -1320 1 832 335 280 32 21 chr17 32481314 32481409 -62791242 + RSINE1 SINE B4 45 140 -25 1 832 279 79 0 0 chr17 32481409 32481447 -62791204 + (CATA)n Simple_repeat Simple_repeat 4 41 0 1 832 321 314 39 47 chr17 32481836 32481963 -62790688 - RMER30 DNA MER1_type -76 126 1 1 832 878 73 128 16 chr17 32482661 32482786 -62789865 + B1_Mus1 SINE Alu 3 141 -7 1 832 278 296 54 117 chr17 32482898 32483009 -62789642 - B1F1 SINE Alu -35 114 11 1 832 344 206 165 10 chr17 32483197 32483300 -62789351 - PB1D9 SINE Alu -1 119 1 1 832 731 165 55 8 chr17 32483316 32483444 -62789207 - B1_Mus2 SINE Alu 0 147 14 1 832 848 134 0 0 chr17 32483558 32483677 -62788974 - B3 SINE B2 -97 119 1 1 832 583 148 180 0 chr17 32483715 32483837 -62788814 - B1_Mus2 SINE Alu -2 145 2 1 832 257 228 90 90 chr17 32483745 32483856 -62788795 - MT2B LTR ERVL -337 264 154 1 832 22 0 0 0 chr17 32483952 32483974 -62788677 + AT_rich Low_complexity Low_complexity 1 22 0 1 832 672 188 25 17 chr17 32483983 32484102 -62788549 + PB1D9 SINE Alu 1 120 0 1 832 1214 48 7 0 chr17 32484108 32484255 -62788396 + B1_Mus1 SINE Alu 1 148 0 1 832 237 292 82 14 chr17 32484452 32484469 -62788182 + B4A SINE B4 68 89 -203 1 832 317 224 92 23 chr17 32484469 32484556 -62788095 + B1_Mur2 SINE Alu 1 93 -56 1 832 257 267 78 10 chr17 32484713 32484815 -62787836 + PB1D7 SINE Alu 9 117 -3 1 832 234 81 0 0 chr17 32484964 32485001 -62787650 + (A)n Simple_repeat Simple_repeat 1 37 0 1 832 237 278 40 53 chr17 32485185 32485261 -62787390 - ID4_ SINE ID -4 79 5 1 832 509 240 178 32 chr17 32485595 32485780 -62786871 + B3 SINE B2 5 216 0 1 832 21 0 0 0 chr17 32485781 32485802 -62786849 + AT_rich Low_complexity Low_complexity 1 21 0 1 832 551 243 30 87 chr17 32485810 32486014 -62786637 + B3A SINE B2 23 210 -6 1 832 327 192 5 235 chr17 32486017 32486237 -62786414 - MER20 DNA MER1_type -50 169 1 1 832 420 295 70 0 chr17 32487960 32488089 -62784562 + B1F SINE Alu 2 139 -10 1 832 242 303 25 50 chr17 32488178 32488258 -62784393 + ID4 SINE ID 6 83 0 1 832 861 160 225 0 chr17 32488272 32488441 -62784210 - B3 SINE B2 -9 207 1 1 832 865 215 88 10 chr17 32488788 32488981 -62783670 - B3 SINE B2 -1 215 8 1 832 23 54 0 0 chr17 32489684 32489721 -62782930 + AT_rich Low_complexity Low_complexity 1 37 0 1 832 593 130 66 15 chr17 32490161 32490274 -62782377 + B1_Mur4 SINE Alu 9 150 0 1 832 547 209 139 0 chr17 32490303 32490432 -62782219 + B1_Mus1 SINE Alu 2 148 0 1 832 21 0 0 0 chr17 32490433 32490454 -62782197 + AT_rich Low_complexity Low_complexity 1 21 0 1 832 501 279 38 15 chr17 32492528 32492659 -62779992 - B1F SINE Alu -6 143 10 1 832 295 235 88 1 chr17 32492862 32492950 -62779701 - MIR SINE MIR -22 246 153 1 832 490 223 0 104 chr17 32492951 32493076 -62779575 - PB1D9 SINE Alu -3 117 6 1 832 267 333 57 40 chr17 32493088 32493219 -62779432 - MIRb SINE MIR -121 147 8 1 832 392 284 29 28 chr17 32495146 32495291 -62777360 + MIRb SINE MIR 50 197 -71 1 832 190 280 287 9 chr17 32495416 32495524 -62777127 - MIRb SINE MIR -1 267 130 1 832 197 108 27 0 chr17 32497526 32497563 -62775088 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 1 832 280 308 4 76 chr17 32498998 32499138 -62773513 - MIRb SINE MIR -49 213 80 1 832 23 33 0 0 chr17 32501131 32501161 -62771490 + GC_rich Low_complexity Low_complexity 1 30 0 1 832 285 155 0 0 chr17 32501186 32501244 -62771407 + (CGG)n Simple_repeat Simple_repeat 3 60 0 2 832 38 68 0 0 chr17 32501265 32501338 -62771313 + GC_rich Low_complexity Low_complexity 1 73 0 3 832 207 240 22 0 chr17 32502680 32502747 -62769904 + MIR SINE MIR 84 154 -122 4 832 1262 54 0 0 chr17 32502749 32502897 -62769754 + B1_Mus1 SINE Alu 1 148 0 5 832 204 40 0 0 chr17 32502897 32502922 -62769729 + (A)n Simple_repeat Simple_repeat 1 25 0 6 832 375 174 272 107 chr17 32503177 32503280 -62769371 - PB1D9 SINE Alu 0 120 1 7 832 1257 54 0 0 chr17 32503364 32503511 -62769140 - B1_Mus1 SINE Alu 0 148 2 8 832 369 247 0 13 chr17 32503698 32503776 -62768875 + ID4 SINE ID 3 79 -4 9 832 333 279 35 49 chr17 32503944 32503966 -62768685 - MER33 DNA MER1_type -183 141 118 1 832 317 253 0 48 chr17 32503966 32504049 -62768602 - ID4 SINE ID 0 83 5 1 832 445 269 28 37 chr17 32504049 32504214 -62768437 - MER3 DNA MER1_type -83 126 2 1 832 565 309 31 16 chr17 32504237 32504428 -62768223 + MIR SINE MIR 18 211 -51 1 832 416 263 111 26 chr17 32504546 32504663 -62767988 - B1F SINE Alu -3 146 20 1 832 190 333 87 48 chr17 32505496 32505600 -62767051 + L2a LINE L2 3142 3249 -126 1 832 209 83 28 0 chr17 32505623 32505659 -62766992 + (TCCC)n Simple_repeat Simple_repeat 2 38 0 1 12 284 265 136 10 chr17 32505842 32505945 -62766706 + L2a LINE L2 3311 3426 0 1 833 2097 80 31 16 chr17 32506366 32506683 -62765968 + RLTRETN_Mm LTR ERVK 1 322 0 1 833 2946 31 0 0 chr17 32506683 32507039 -62765612 + ETnERV-int LTR ERVK 1 356 -2958 1 833 24823 82 16 18 chr17 32507008 32513144 -62759507 + MMETn-int LTR ERVK 180 7299 -107 1 833 2097 80 31 16 chr17 32513144 32513461 -62759190 + RLTRETN_Mm LTR ERVK 1 322 0 1 833 224 214 0 0 chr17 32516035 32516077 -62756574 + MIRm SINE MIR 113 154 -122 1 833 802 179 22 0 chr17 32516321 32516455 -62756196 - B1_Mur1 SINE Alu -12 137 1 1 833 841 196 7 0 chr17 32516494 32516642 -62756009 - B1_Mur2 SINE Alu 0 149 1 2 833 260 296 0 0 chr17 32516686 32516740 -62755911 - ID4_ SINE ID 0 83 30 2 833 298 296 83 0 chr17 32516849 32516957 -62755694 - B1F SINE Alu -8 141 25 2 833 338 346 0 0 chr17 32516960 32517067 -62755584 - PB1D10 SINE Alu -6 111 5 2 833 432 292 58 0 chr17 32517093 32517213 -62755438 - ID_B1 SINE B4 -1 223 97 2 833 262 284 0 156 chr17 32517492 32517588 -62755063 + ID4_ SINE ID 3 83 0 2 833 279 195 123 29 chr17 32517690 32517800 -62754851 - MIRc SINE MIR -118 150 18 2 833 261 0 0 0 chr17 32518623 32518652 -62753999 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 833 434 248 154 0 chr17 32518653 32518770 -62753881 - B1_Mur2 SINE Alu -13 136 2 2 833 296 309 23 68 chr17 32518843 32519020 -62753631 + YREP_Mm Unknown Unknown 128 296 -1516 2 833 823 200 0 20 chr17 32518894 32519042 -62753609 - ID_B1 SINE B4 0 224 80 3 833 456 214 44 9 chr17 32519044 32519157 -62753494 - PB1D10 SINE Alu 0 117 1 3 833 571 248 44 0 chr17 32519166 32519303 -62753348 - B1F2 SINE Alu -5 144 2 3 833 442 317 31 46 chr17 32520039 32520234 -62752417 - MER20 DNA MER1_type -24 195 4 3 833 220 234 32 15 chr17 32521883 32521950 -62750701 + MIR SINE MIR 52 120 -88 3 833 242 257 27 13 chr17 32522307 32522382 -62750269 + ID4_ SINE ID 5 80 -3 3 833 907 150 0 52 chr17 32522457 32522612 -62750039 + B1_Mus2 SINE Alu 1 147 0 3 833 1020 234 19 0 chr17 32522649 32522858 -62749793 + B3 SINE B2 3 215 -1 3 833 331 244 134 0 chr17 32522891 32523010 -62749641 + B3 SINE B2 81 215 -1 3 833 263 174 0 19 chr17 32523031 32523084 -62749567 + ID4_ SINE ID 1 52 -100 3 833 304 327 17 80 chr17 32523091 32523149 -62749502 + L1MEe LINE L1 648 707 -4147 4 833 1143 69 14 0 chr17 32523149 32523293 -62749358 + B1_Mus2 SINE Alu 2 147 0 4 833 304 327 17 80 chr17 32523293 32523399 -62749252 + L1MEe LINE L1 708 802 -4052 4 833 267 300 12 0 chr17 32523399 32523479 -62749172 + ID4 SINE ID 2 82 -1 4 833 602 317 112 27 chr17 32523696 32524062 -62748589 + L2b LINE L2 2977 3373 -2 4 833 290 263 7 28 chr17 32526033 32526174 -62746477 + (CCCCG)n Simple_repeat Simple_repeat 1 138 0 4 833 219 338 0 0 chr17 32526249 32526326 -62746325 + (CCG)n Simple_repeat Simple_repeat 3 79 0 4 833 246 306 25 75 chr17 32528527 32528647 -62744004 + PB1D7 SINE Alu 1 114 -6 4 833 2021 151 78 21 chr17 32532229 32532614 -62740037 + MTB_Mm LTR MaLR 1 407 0 4 833 262 237 0 17 chr17 32535299 32535359 -62737292 + CT-rich Low_complexity Low_complexity 3 61 0 4 833 504 0 0 0 chr17 32535696 32535752 -62736899 + (TC)n Simple_repeat Simple_repeat 2 57 0 4 833 857 48 0 0 chr17 32536627 32536730 -62735921 + B1_Mus1 SINE Alu 26 128 -20 5 833 279 0 0 0 chr17 32536736 32536767 -62735884 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 833 291 308 103 0 chr17 32536778 32536885 -62735766 - MIRc SINE MIR -139 129 8 5 833 385 283 36 36 chr17 32536891 32537001 -62735650 + PB1D10 SINE Alu 1 110 -7 5 833 281 135 0 19 chr17 32537015 32537068 -62735583 + GA-rich Low_complexity Low_complexity 2 53 0 5 833 587 39 13 0 chr17 32537091 32537169 -62735482 + (TAGA)n Simple_repeat Simple_repeat 2 80 0 5 833 440 282 54 39 chr17 32537217 32537346 -62735305 + RSINE1 SINE B4 2 132 -33 5 833 825 107 0 0 chr17 32537351 32537500 -62735151 + (TC)n Simple_repeat Simple_repeat 2 150 0 5 833 269 303 40 0 chr17 32537793 32537869 -62734782 - ID4_ SINE ID -4 79 1 5 833 232 259 0 0 chr17 32537993 32538047 -62734604 + ID4 SINE ID 2 55 -28 5 833 776 88 9 0 chr17 32538053 32538167 -62734484 + (GAAA)n Simple_repeat Simple_repeat 1 115 0 6 833 510 248 18 0 chr17 32538169 32538282 -62734369 + PB1D9 SINE Alu 5 119 -1 6 833 403 253 0 71 chr17 32538540 32538638 -62734013 - PB1D10 SINE Alu -4 113 23 6 833 1521 68 5 0 chr17 32538732 32538923 -62733728 - B2_Mm1t SINE B2 0 193 2 6 833 228 288 0 108 chr17 32538999 32539073 -62733578 - tRNA-Ala-GCA tRNA tRNA -7 68 3 6 833 255 307 78 8 chr17 32539178 32539306 -62733345 + L2a LINE L2 3278 3414 -12 6 833 715 175 42 0 chr17 32539307 32539427 -62733224 + RSINE1 SINE B4 3 127 -38 6 833 234 0 0 0 chr17 32539511 32539537 -62733114 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 833 270 0 0 0 chr17 32539553 32539583 -62733068 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 6 833 221 178 69 15 chr17 32540682 32540757 -62731894 + MIRc SINE MIR 101 177 -31 6 833 474 264 51 51 chr17 32540839 32540995 -62731656 - RSINE1 SINE B4 -8 157 2 7 833 238 266 47 0 chr17 32541002 32541066 -62731585 - ID4 SINE ID -14 69 3 7 833 222 238 57 100 chr17 32541077 32541147 -62731504 - B1F SINE Alu -21 128 62 7 833 247 333 65 57 chr17 32541493 32541617 -62731034 + RLTR13D4 LTR ERVK 491 615 -418 7 833 396 274 0 10 chr17 32541548 32541651 -62731000 + PB1D10 SINE Alu 16 117 0 7 833 755 88 9 0 chr17 32541659 32541772 -62730879 + (GAAA)n Simple_repeat Simple_repeat 3 116 0 7 833 460 326 27 80 chr17 32541830 32542017 -62730634 + B3A SINE B2 1 177 -21 7 833 369 0 0 0 chr17 32542020 32542061 -62730590 + (TC)n Simple_repeat Simple_repeat 2 42 0 7 833 510 31 0 0 chr17 32542061 32542125 -62730526 + (CA)n Simple_repeat Simple_repeat 1 64 0 7 833 647 287 25 81 chr17 32542254 32542398 -62730253 - ID_B1 SINE B4 0 224 86 7 833 203 0 37 0 chr17 32542398 32542425 -62730226 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 8 833 647 287 25 81 chr17 32542425 32542515 -62730136 - ID SINE ID -139 85 3 7 833 341 281 11 0 chr17 32542527 32542616 -62730035 - PB1D10 SINE Alu -2 115 26 8 833 375 23 0 0 chr17 32542650 32542694 -62729957 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 833 624 38 0 0 chr17 32542762 32542841 -62729810 + (TG)n Simple_repeat Simple_repeat 1 79 0 8 833 465 62 0 0 chr17 32542908 32542973 -62729678 + (TG)n Simple_repeat Simple_repeat 1 65 0 8 833 537 55 0 0 chr17 32543041 32543114 -62729537 + (TG)n Simple_repeat Simple_repeat 1 73 0 8 833 570 41 0 0 chr17 32543182 32543255 -62729396 + (TG)n Simple_repeat Simple_repeat 1 73 0 8 833 525 44 0 0 chr17 32543322 32543390 -62729261 + (TG)n Simple_repeat Simple_repeat 2 69 0 8 833 591 51 0 0 chr17 32543455 32543534 -62729117 + (TG)n Simple_repeat Simple_repeat 1 79 0 8 833 525 44 0 0 chr17 32543602 32543670 -62728981 + (TG)n Simple_repeat Simple_repeat 2 69 0 8 833 543 43 0 0 chr17 32543735 32543805 -62728846 + (TG)n Simple_repeat Simple_repeat 2 71 0 9 833 552 42 0 0 chr17 32543870 32543941 -62728710 + (TG)n Simple_repeat Simple_repeat 1 71 0 9 833 465 62 0 0 chr17 32544008 32544073 -62728578 + (TG)n Simple_repeat Simple_repeat 1 65 0 9 833 609 49 0 0 chr17 32544141 32544222 -62728429 + (TG)n Simple_repeat Simple_repeat 1 81 0 9 833 354 61 0 0 chr17 32544290 32544339 -62728312 + (TG)n Simple_repeat Simple_repeat 1 49 0 9 833 227 240 46 138 chr17 32544339 32544426 -62728225 - B3A SINE B2 -16 182 104 9 833 426 53 0 0 chr17 32544426 32544483 -62728168 + (TG)n Simple_repeat Simple_repeat 1 57 0 9 833 235 232 70 28 chr17 32544483 32544554 -62728097 - B3A SINE B2 -16 182 109 9 833 483 60 0 0 chr17 32544557 32544624 -62728027 + (TG)n Simple_repeat Simple_repeat 1 67 0 9 833 579 40 0 0 chr17 32544692 32544766 -62727885 + (TG)n Simple_repeat Simple_repeat 2 75 0 9 833 626 283 81 6 chr17 32544767 32544927 -62727724 - B3A SINE B2 -25 173 2 1 833 210 37 0 0 chr17 32544937 32544964 -62727687 + (T)n Simple_repeat Simple_repeat 1 27 0 1 833 1295 27 0 0 chr17 32544964 32545111 -62727540 - B1_Mm SINE Alu 0 147 1 1 833 246 315 13 27 chr17 32545315 32545390 -62727261 + RSINE1 SINE B4 86 159 -6 1 833 243 236 110 23 chr17 32545473 32545574 -62727077 + MIR3 SINE MIR 54 163 -105 1 833 260 333 0 12 chr17 32545639 32545721 -62726930 + B3A SINE B2 83 163 -35 1 833 206 288 95 14 chr17 32545780 32545854 -62726797 - L2c LINE L2 -9 3378 3299 1 833 376 300 0 32 chr17 32546099 32546192 -62726459 + B1F1 SINE Alu 7 96 -53 1 833 591 124 239 0 chr17 32546336 32546449 -62726202 + B1_Mur3 SINE Alu 1 140 -9 1 833 342 0 0 0 chr17 32546464 32546502 -62726149 + (A)n Simple_repeat Simple_repeat 1 38 0 1 833 958 236 42 5 chr17 32546592 32546805 -62725846 + ID_B1 SINE B4 2 222 -2 1 833 702 301 13 98 chr17 32547013 32547055 -62725596 - B3 SINE B2 -6 210 168 1 833 441 0 0 0 chr17 32547055 32547104 -62725547 + (TATG)n Simple_repeat Simple_repeat 4 52 0 1 833 702 301 13 98 chr17 32547104 32547246 -62725405 - B3 SINE B2 -49 167 43 1 833 1479 58 27 0 chr17 32547246 32547434 -62725217 - B2_Mm2 SINE B2 -2 193 1 1 833 702 301 13 98 chr17 32547434 32547473 -62725178 - B3 SINE B2 -174 42 5 1 833 193 222 32 0 chr17 32547477 32547540 -62725111 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 1 833 1644 47 9 5 chr17 32547614 32547829 -62724822 - L1_Mus3 LINE L1 -3 6635 6420 1 833 331 176 0 0 chr17 32547832 32547883 -62724768 + ID_B1 SINE B4 152 202 -22 1 833 566 346 19 0 chr17 32547880 32548036 -62724615 - ID_B1 SINE B4 -62 162 4 1 833 204 40 0 0 chr17 32548042 32548067 -62724584 + (TTAA)n Simple_repeat Simple_repeat 1 25 0 1 833 538 133 226 9 chr17 32548080 32548186 -62724465 - B1_Mus1 SINE Alu -4 144 16 1 833 642 261 0 0 chr17 32548211 32548341 -62724310 - B1_Mur1 SINE Alu -9 140 11 1 833 258 338 41 83 chr17 32548341 32548356 -62724295 - B4 SINE B4 -75 217 79 1 833 635 346 64 23 chr17 32548717 32548936 -62723715 - B4A SINE B4 -22 270 43 1 833 327 265 28 0 chr17 32549016 32549101 -62723550 - ID4 SINE ID -54 98 12 1 833 273 330 10 81 chr17 32549941 32550040 -62722611 - ID_B1 SINE B4 -85 139 48 1 833 831 156 35 0 chr17 32550043 32550184 -62722467 + B1_Mur4 SINE Alu 5 150 0 1 833 368 202 75 176 chr17 32550534 32550697 -62721954 + B1F SINE Alu 3 149 0 1 833 3092 100 21 0 chr17 32550768 32551199 -62721452 + L1_Mus3 LINE L1 6199 6638 0 1 833 1186 49 0 27 chr17 32551336 32551483 -62721168 + B1_Mus2 SINE Alu 2 144 -3 1 833 197 33 33 0 chr17 32551483 32551513 -62721138 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 833 1147 248 36 11 chr17 32551524 32551805 -62720846 + B4 SINE B4 3 290 -2 1 833 382 234 85 29 chr17 32551857 32552001 -62720650 + B1F SINE Alu 1 148 -1 1 833 383 241 149 18 chr17 32553194 32553308 -62719343 + B1_Mur1 SINE Alu 10 138 -11 1 833 585 0 0 0 chr17 32553311 32553376 -62719275 + (GGA)n Simple_repeat Simple_repeat 1 65 0 1 833 606 63 0 0 chr17 32553377 32553456 -62719195 + (CAG)n Simple_repeat Simple_repeat 3 81 0 1 833 384 106 383 28 chr17 32553458 32553565 -62719086 + B1_Mur4 SINE Alu 6 150 0 1 833 590 136 8 0 chr17 32554193 32554311 -62718340 + (GA)n Simple_repeat Simple_repeat 2 120 0 1 833 454 260 20 20 chr17 32554365 32554467 -62718184 + PB1D10 SINE Alu 10 111 -6 1 833 284 299 0 151 chr17 32554526 32554652 -62717999 - B1F2 SINE Alu -35 114 8 1 833 679 262 101 0 chr17 32554544 32554712 -62717939 - ID_B1 SINE B4 -16 208 24 1 833 1817 173 39 15 chr17 32556186 32556520 -62716131 + ORR1C1 LTR MaLR 1 342 -36 1 833 619 228 39 8 chr17 32556515 32556643 -62716008 + B1F SINE Alu 17 148 -1 1 833 606 189 126 0 chr17 32556734 32556861 -62715790 + B1_Mur2 SINE Alu 1 143 -6 1 833 591 214 0 0 chr17 32556862 32556993 -62715658 + GA-rich Low_complexity Low_complexity 1 131 0 1 833 517 294 123 5 chr17 32557060 32557255 -62715396 - MIR SINE MIR -1 261 44 1 833 419 252 48 16 chr17 32557260 32557385 -62715266 - B1F SINE Alu -2 147 19 1 833 312 293 12 0 chr17 32558076 32558158 -62714493 - ID4_ SINE ID 0 83 1 1 833 423 0 0 0 chr17 32558159 32558206 -62714445 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 1 833 21 82 0 0 chr17 32558296 32558345 -62714306 + AT_rich Low_complexity Low_complexity 1 49 0 1 833 301 190 0 17 chr17 32558350 32558409 -62714242 + B1F1 SINE Alu 92 149 0 1 833 577 185 5 2 chr17 32558485 32558598 -62714053 + B1_Mus1 SINE Alu 1 115 -5 1 833 261 0 0 0 chr17 32558622 32558651 -62714000 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 833 1172 142 50 297 chr17 32558663 32559003 -62713648 - RMER10B LTR ERVL 0 398 195 1 833 1263 94 0 0 chr17 32559003 32559183 -62713468 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 833 1172 142 50 297 chr17 32559183 32559344 -62713307 - RMER10B LTR ERVL -204 194 21 1 833 547 89 0 0 chr17 32559351 32559430 -62713221 + RMER10B LTR ERVL 320 398 0 1 833 536 279 11 75 chr17 32559450 32559624 -62713027 - RSINE1 SINE B4 0 165 3 1 833 186 71 0 0 chr17 32559708 32559736 -62712915 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 1 833 231 36 0 0 chr17 32559797 32559825 -62712826 + (TTCC)n Simple_repeat Simple_repeat 3 30 0 1 833 344 222 56 75 chr17 32559839 32559946 -62712705 - PB1D10 SINE Alu -1 116 12 1 833 435 258 0 0 chr17 32559967 32560060 -62712591 - PB1D10 SINE Alu -5 112 20 1 833 3530 23 2 0 chr17 32560069 32560464 -62712187 + MTA_Mm LTR MaLR 1 396 0 1 833 576 29 0 0 chr17 32560650 32560720 -62711931 + (TTCC)n Simple_repeat Simple_repeat 2 71 0 1 833 549 248 81 16 chr17 32560774 32560897 -62711754 - B1_Mur2 SINE Alu -16 133 3 1 833 374 70 35 0 chr17 32561282 32561339 -62711312 + (TCCC)n Simple_repeat Simple_repeat 3 61 0 1 833 556 196 196 0 chr17 32561341 32561474 -62711177 - RSINE1 SINE B4 -6 159 1 1 833 236 250 12 0 chr17 32561492 32561572 -62711079 + (TG)n Simple_repeat Simple_repeat 1 81 0 1 833 650 295 110 20 chr17 32561610 32561856 -62710795 - B4A SINE B4 -24 268 1 1 833 468 277 8 0 chr17 32561861 32561980 -62710671 - PB1D7 SINE Alu 0 120 1 1 833 285 277 75 0 chr17 32562150 32562244 -62710407 - B1F SINE Alu -36 113 13 1 833 353 149 0 15 chr17 32562503 32562571 -62710080 + CT-rich Low_complexity Low_complexity 5 71 0 1 833 292 262 107 0 chr17 32562582 32562666 -62709985 - PB1D10 SINE Alu -16 101 9 1 833 591 301 32 6 chr17 32562595 32562752 -62709899 - ID_B1 SINE B4 -63 161 1 1 833 613 227 38 23 chr17 32562950 32563081 -62709570 + RSINE1 SINE B4 11 143 -22 1 833 251 276 49 63 chr17 32563081 32563126 -62709525 + B2_Mm2 SINE B2 35 193 0 1 833 386 224 59 0 chr17 32563315 32563400 -62709251 - PB1D10 SINE Alu -6 111 22 1 833 285 251 43 0 chr17 32563430 32563499 -62709152 - B1F1 SINE Alu -9 108 40 1 833 247 328 0 0 chr17 32563448 32563512 -62709139 - 4.5SRNA scRNA scRNA -6 88 25 1 833 340 317 72 36 chr17 32563521 32563688 -62708963 - L1MC1 LINE L1 -44 6289 6117 1 833 247 288 27 14 chr17 32563730 32563804 -62708847 - ID4 SINE ID -1 82 8 1 833 3190 170 16 12 chr17 32563805 32564371 -62708280 - Lx5 LINE L1 -43 7007 6440 1 833 24 0 0 0 chr17 32564379 32564403 -62708248 + AT_rich Low_complexity Low_complexity 1 24 0 1 833 1079 129 6 0 chr17 32564496 32564674 -62707977 + (TTCTC)n Simple_repeat Simple_repeat 2 180 0 1 833 435 83 0 0 chr17 32564674 32564734 -62707917 + (TCCC)n Simple_repeat Simple_repeat 1 60 0 1 833 1077 87 0 0 chr17 32564734 32564884 -62707767 + (TTTC)n Simple_repeat Simple_repeat 1 150 0 1 833 618 224 112 0 chr17 32564886 32565011 -62707640 - B1_Mur2 SINE Alu -7 142 4 1 833 294 310 8 93 chr17 32565019 32565145 -62707506 - B1F SINE Alu -3 114 3 1 833 236 255 0 0 chr17 32565158 32565205 -62707446 + polypyrimidine Low_complexity Low_complexity 1 47 0 1 833 728 172 67 7 chr17 32565295 32565430 -62707221 + B1_Mur1 SINE Alu 7 149 0 1 833 219 69 0 0 chr17 32565431 32565460 -62707191 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 833 1177 107 0 0 chr17 32565576 32565735 -62706916 - B2_Mm2 SINE B2 -32 163 5 1 833 1014 252 27 107 chr17 32565733 32566182 -62706469 - RLTR12B LTR ERVK -74 454 42 1 833 668 294 56 80 chr17 32566289 32566540 -62706111 - B4A SINE B4 0 292 48 1 833 207 0 0 0 chr17 32566557 32566580 -62706071 + (TC)n Simple_repeat Simple_repeat 1 23 0 1 833 405 278 47 8 chr17 32566581 32566708 -62705943 - B1F SINE Alu -8 141 10 1 833 195 100 0 0 chr17 32566801 32566831 -62705820 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 833 360 185 62 0 chr17 32566831 32566896 -62705755 - RSINE1 SINE B4 -51 114 46 1 833 921 123 0 0 chr17 32566903 32567082 -62705569 + (CAGT)n Simple_repeat Simple_repeat 1 179 0 1 833 918 122 0 0 chr17 32567082 32567354 -62705297 + (CAGG)n Simple_repeat Simple_repeat 1 272 0 1 833 588 158 0 0 chr17 32567361 32567494 -62705157 + (CAGT)n Simple_repeat Simple_repeat 3 135 0 1 833 244 265 0 0 chr17 32567494 32567543 -62705108 - RSINE1 SINE B4 -110 55 7 1 833 189 0 0 0 chr17 32567763 32567784 -62704867 + (GGCTG)n Simple_repeat Simple_repeat 3 23 0 1 833 252 250 0 0 chr17 32568086 32568134 -62704517 + RSINE1 SINE B4 64 111 -54 2 833 576 101 0 0 chr17 32568150 32568239 -62704412 + (CA)n Simple_repeat Simple_repeat 2 90 0 2 833 397 243 0 13 chr17 32568276 32568351 -62704300 + ID4_ SINE ID 6 79 -4 2 833 192 77 0 0 chr17 32568422 32568448 -62704203 + (ATGGTG)n Simple_repeat Simple_repeat 4 29 0 2 833 382 260 14 134 chr17 32568490 32568632 -62704019 - RSINE1 SINE B4 -38 127 3 2 833 469 178 0 0 chr17 32568680 32568753 -62703898 - B1_Mur4 SINE Alu -51 99 27 2 833 1075 71 0 47 chr17 32568753 32568901 -62703750 + B1_Mus1 SINE Alu 1 141 -7 2 833 338 61 61 0 chr17 32568915 32568981 -62703670 + (CAAAAA)n Simple_repeat Simple_repeat 3 72 0 2 833 344 189 124 21 chr17 32569097 32569194 -62703457 + B2_Mm2 SINE B2 89 195 0 2 833 741 195 194 6 chr17 32569200 32569375 -62703276 - B3 SINE B2 -8 208 1 2 833 342 268 12 24 chr17 32569426 32569510 -62703141 - ZP3AR Satellite Satellite -86 126 44 2 833 1209 83 59 0 chr17 32569525 32569694 -62702957 - B2_Mm2 SINE B2 -15 180 2 2 833 291 85 0 0 chr17 32569956 32570003 -62702648 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 2 833 2195 141 55 19 chr17 32570010 32570372 -62702279 - ORR1C2 LTR MaLR -9 375 1 2 833 443 275 16 70 chr17 32570372 32570500 -62702151 + RSINE1 SINE B4 22 142 -23 2 833 321 89 0 0 chr17 32570500 32570545 -62702106 + (CAAT)n Simple_repeat Simple_repeat 3 47 0 2 833 719 245 144 0 chr17 32570568 32570756 -62701895 + B3 SINE B2 2 216 0 2 833 459 0 0 0 chr17 32570761 32570812 -62701839 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 833 390 248 178 8 chr17 32570812 32570930 -62701721 + RSINE1 SINE B4 11 148 -17 2 833 1268 176 293 32 chr17 32570974 32571315 -62701336 - RLTR23 LTR ERV1 0 430 1 2 833 1483 238 96 38 chr17 32571326 32571881 -62700770 + Lx8 LINE L1 6887 7473 0 2 833 382 282 19 0 chr17 32572693 32572796 -62699855 + ID_B1 SINE B4 116 220 -4 2 833 931 137 7 28 chr17 32572818 32572961 -62699690 - B1_Mur3 SINE Alu -1 148 9 2 833 423 300 32 114 chr17 32572819 32572977 -62699674 - B4 SINE B4 -69 223 79 2 833 979 114 0 0 chr17 32573000 32573132 -62699519 - B1_Mur3 SINE Alu -13 136 5 2 833 922 235 53 10 chr17 32573152 32573358 -62699293 - B3 SINE B2 -1 215 1 2 833 1081 230 243 16 chr17 32573497 32573925 -62698726 - Lx8 LINE L1 -121 7352 6828 2 833 273 212 35 70 chr17 32574048 32574134 -62698517 - B1F SINE Alu -6 143 61 2 833 291 328 8 62 chr17 32574198 32574219 -62698432 - ID_B1 SINE B4 -3 221 99 2 833 404 306 9 9 chr17 32574219 32574328 -62698323 - B1F1 SINE Alu -23 126 18 2 833 704 230 15 0 chr17 32574343 32574478 -62698173 + B1_Mur1 SINE Alu 2 138 -11 2 833 269 248 324 18 chr17 32574493 32574604 -62698047 - RSINE1 SINE B4 -17 148 4 2 833 22 35 0 0 chr17 32574608 32574637 -62698014 + AT_rich Low_complexity Low_complexity 1 29 0 2 833 423 73 0 0 chr17 32574659 32574714 -62697937 - ORR1A3 LTR MaLR 0 326 272 2 833 204 40 0 0 chr17 32574714 32574739 -62697912 + (T)n Simple_repeat Simple_repeat 1 25 0 2 833 2119 97 0 3 chr17 32575085 32575374 -62697277 - ORR1A3 LTR MaLR -38 288 1 2 833 701 263 0 32 chr17 32575585 32575742 -62696909 + RSINE1 SINE B4 13 164 -1 2 833 860 254 47 38 chr17 32575761 32576080 -62696571 + L1M1 LINE L1 5470 5791 -512 2 833 207 211 0 0 chr17 32576088 32576126 -62696525 + (TATG)n Simple_repeat Simple_repeat 1 38 0 2 833 599 142 9 0 chr17 32576165 32576271 -62696380 + GA-rich Low_complexity Low_complexity 1 107 0 2 833 436 262 146 8 chr17 32577025 32577148 -62695503 - ID_B1 SINE B4 -4 220 81 2 833 496 176 17 61 chr17 32577228 32577343 -62695308 + RSINE1 SINE B4 22 131 -34 2 833 598 240 40 8 chr17 32577383 32577509 -62695142 - RSINE1 SINE B4 -29 136 7 2 833 407 259 62 36 chr17 32577515 32577627 -62695024 - PB1D10 SINE Alu 0 117 3 2 833 775 306 77 47 chr17 32577627 32578093 -62694558 - L1MB5 LINE L1 -15 6159 5680 2 833 440 270 99 20 chr17 32578118 32578269 -62694382 - RSINE1 SINE B4 0 165 3 2 833 407 282 0 64 chr17 32578281 32578406 -62694245 - PB1D10 SINE Alu 0 117 1 2 833 529 273 67 7 chr17 32578424 32578585 -62694066 - ID_B1 SINE B4 -44 248 78 2 833 447 257 38 69 chr17 32578620 32578779 -62693872 - RSINE1 SINE B4 0 165 12 2 833 487 174 94 55 chr17 32578775 32578903 -62693748 - ID_B1 SINE B4 -4 220 88 2 833 2325 116 3 15 chr17 32579050 32579383 -62693268 - ORR1A4 LTR MaLR 0 329 1 2 833 583 241 7 42 chr17 32579688 32579831 -62692820 - B3A SINE B2 -4 194 57 2 833 221 246 108 14 chr17 32579871 32579945 -62692706 - ID4_ SINE ID -1 82 2 2 833 313 205 256 0 chr17 32580246 32580324 -62692327 - PB1D10 SINE Alu -19 98 1 2 833 358 215 0 37 chr17 32580581 32580667 -62691984 + ID4 SINE ID 13 98 -54 2 833 604 146 121 71 chr17 32580667 32580807 -62691844 + B1_Mus1 SINE Alu 1 147 -1 2 833 349 237 0 88 chr17 32580807 32580846 -62691805 + BC1_Mm scRNA scRNA 99 127 -25 2 833 218 352 63 8 chr17 32580899 32581025 -62691626 + L2 LINE L2 2758 2890 -529 2 833 1938 171 12 6 chr17 32581049 32581385 -62691266 - MTC LTR MaLR 0 421 84 2 833 659 173 0 0 chr17 32581384 32581488 -62691163 - B1_Mur4 SINE Alu -46 104 1 2 833 513 108 40 0 chr17 32581488 32581562 -62691089 - MTC LTR MaLR -340 81 5 2 833 3302 200 55 102 chr17 32581567 32582568 -62690083 - MTC-int LTR MaLR 0 1098 145 2 833 329 169 0 0 chr17 32582596 32582655 -62689996 - B1_Mur3 SINE Alu 0 149 91 2 833 1207 55 0 7 chr17 32582673 32582821 -62689830 - B1_Mus1 SINE Alu -1 147 1 2 833 905 187 83 54 chr17 32582821 32582932 -62689719 - MTC LTR MaLR -211 210 91 2 833 1404 54 32 26 chr17 32582932 32583122 -62689529 + B2_Mm1t SINE B2 3 193 0 2 833 905 187 83 54 chr17 32583122 32583214 -62689437 - MTC LTR MaLR -331 90 2 2 833 378 181 69 0 chr17 32583220 32583292 -62689359 + RSINE1 SINE B4 25 101 -64 2 833 202 365 83 34 chr17 32583313 32583517 -62689134 + L2 LINE L2 2866 3079 -340 2 833 1178 195 14 10 chr17 32584207 32584414 -62688237 + B3 SINE B2 3 210 -6 2 833 359 270 81 0 chr17 32584438 32584549 -62688102 + PB1D7 SINE Alu 1 120 0 2 833 906 196 75 35 chr17 32584558 32584759 -62687892 + B3 SINE B2 8 216 0 2 833 535 354 6 24 chr17 32584759 32584924 -62687727 + RSINE1 SINE B4 4 165 0 2 833 214 320 108 59 chr17 32584924 32584945 -62687706 + B3A SINE B2 3 197 -1 2 833 659 219 80 0 chr17 32584968 32585105 -62687546 + ID_B1 SINE B4 76 223 -1 2 833 335 300 150 26 chr17 32585111 32585378 -62687273 - L1M4 LINE L1 -349 5825 5526 2 833 28 29 0 0 chr17 32585438 32585473 -62687178 + AT_rich Low_complexity Low_complexity 1 35 0 2 833 1700 196 62 6 chr17 32585536 32585874 -62686777 - MTC LTR MaLR 0 421 65 2 833 210 203 322 0 chr17 32585897 32585956 -62686695 - RSINE1 SINE B4 -84 81 4 2 833 515 209 29 0 chr17 32585974 32586079 -62686572 - B1_Mur1 SINE Alu 0 149 42 2 833 515 287 109 0 chr17 32586119 32586293 -62686358 - B3A SINE B2 -1 197 5 2 833 387 283 45 36 chr17 32586330 32586440 -62686211 + PB1D9 SINE Alu 2 112 -8 2 833 238 260 28 27 chr17 32587336 32587419 -62685232 - MIRm SINE MIR -47 161 78 2 833 670 199 7 22 chr17 32588460 32588599 -62684052 - B3 SINE B2 -1 215 79 2 833 510 230 73 13 chr17 32588618 32588768 -62683883 - RSINE1 SINE B4 -5 160 2 2 833 640 80 10 10 chr17 32588990 32589091 -62683560 + (TCTA)n Simple_repeat Simple_repeat 4 104 0 2 833 222 286 111 0 chr17 32589091 32589154 -62683497 - PB1D10 SINE Alu -19 98 29 2 833 681 281 12 0 chr17 32591042 32591202 -62681449 - RSINE1 SINE B4 -1 164 3 2 833 264 262 209 27 chr17 32591202 32591312 -62681339 - MIRb SINE MIR -57 211 82 2 833 1451 49 22 11 chr17 32591522 32591707 -62680944 - B2_Mm2 SINE B2 -8 187 1 2 833 1158 223 18 0 chr17 32592329 32592549 -62680102 - ID_B1 SINE B4 0 224 1 2 833 471 178 47 47 chr17 32592593 32592699 -62679952 + B1F SINE Alu 15 120 -29 2 833 374 259 8 74 chr17 32592597 32592707 -62679944 + ID_B1 SINE B4 100 204 -20 2 833 709 74 9 18 chr17 32592707 32592817 -62679834 + (TTTTC)n Simple_repeat Simple_repeat 1 109 0 2 833 195 129 0 0 chr17 32592832 32592863 -62679788 + (TCCC)n Simple_repeat Simple_repeat 1 31 0 2 833 869 190 0 14 chr17 32592872 32593011 -62679640 - B1_Mur4 SINE Alu -12 138 2 2 833 504 0 0 0 chr17 32593073 32593129 -62679522 + (TC)n Simple_repeat Simple_repeat 1 56 0 2 833 878 176 0 8 chr17 32593129 32593261 -62679390 - B1_Mur2 SINE Alu -17 132 2 2 833 311 0 26 0 chr17 32593297 32593336 -62679315 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 833 510 204 9 72 chr17 32593409 32593520 -62679131 - PB1D10 SINE Alu -13 104 1 2 833 409 255 18 62 chr17 32593419 32593532 -62679119 - ID_B1 SINE B4 -48 176 69 2 833 723 287 6 6 chr17 32593538 32593728 -62678923 - B3A SINE B2 -10 206 23 2 833 362 262 0 12 chr17 32593725 32593806 -62678845 - RSINE1 SINE B4 -84 81 2 2 833 238 341 0 8 chr17 32594010 32594143 -62678508 + (CATGC)n Simple_repeat Simple_repeat 3 134 0 2 833 244 327 0 18 chr17 32594198 32594369 -62678282 + (CATGC)n Simple_repeat Simple_repeat 4 171 0 2 833 250 342 13 13 chr17 32594399 32594556 -62678095 + (CATGC)n Simple_repeat Simple_repeat 3 159 0 2 833 1420 57 23 6 chr17 32594718 32594895 -62677756 - B2_Mm2 SINE B2 -14 181 2 2 833 1165 270 113 22 chr17 32594895 32595399 -62677252 - L1MB5 LINE L1 -68 6106 5557 2 833 513 240 32 8 chr17 32595418 32595544 -62677107 - B1_Mur1 SINE Alu 0 149 21 3 833 601 260 16 8 chr17 32595545 32595673 -62676978 - RSINE1 SINE B4 -34 131 3 3 833 324 0 0 0 chr17 32595688 32595724 -62676927 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 833 696 289 82 86 chr17 32595777 32596057 -62676594 - B4A SINE B4 -6 286 8 3 833 806 179 6 0 chr17 32596057 32596225 -62676426 + CT-rich Low_complexity Low_complexity 2 170 0 3 833 242 311 48 96 chr17 32596290 32596327 -62676324 - YREP_Mm Unknown Unknown -1466 346 188 3 833 723 208 15 0 chr17 32596327 32596450 -62676201 + B1_Mur1 SINE Alu 7 131 -18 3 833 1976 126 58 83 chr17 32596450 32596813 -62675838 - ORR1B1 LTR MaLR 0 394 41 3 833 481 323 8 8 chr17 32596886 32597014 -62675637 - RSINE1 SINE B4 -23 142 15 3 833 185 239 202 121 chr17 32597070 32597194 -62675457 - MIR SINE MIR -112 150 17 3 833 1191 77 59 6 chr17 32597498 32597668 -62674983 + B2_Mm1t SINE B2 1 179 -14 3 833 426 17 0 17 chr17 32597690 32597749 -62674902 + B2_Mm1a SINE B2 127 184 -9 3 833 620 213 45 12 chr17 32597768 32597946 -62674705 - B3A SINE B2 -17 199 6 3 833 573 15 0 0 chr17 32597974 32598040 -62674611 + (TCTA)n Simple_repeat Simple_repeat 2 67 0 3 833 657 339 41 14 chr17 32598396 32598617 -62674034 + B4A SINE B4 30 256 -36 3 833 225 245 19 0 chr17 32598645 32598698 -62673953 + (CAAG)n Simple_repeat Simple_repeat 2 55 0 3 833 566 231 50 0 chr17 32598703 32598824 -62673827 + RSINE1 SINE B4 6 132 -33 3 833 202 286 0 18 chr17 32598864 32598921 -62673730 + GA-rich Low_complexity Low_complexity 3 58 0 3 833 412 343 14 7 chr17 32598959 32599097 -62673554 + RSINE1 SINE B4 8 146 -19 3 833 209 316 31 13 chr17 32599188 32599286 -62673365 + L2b LINE L2 3265 3412 -14 3 833 567 193 6 34 chr17 32599543 32599720 -62672931 + CT-rich Low_complexity Low_complexity 3 174 0 3 833 341 125 47 0 chr17 32599720 32599784 -62672867 - B1_Mus2 SINE Alu 0 147 81 3 833 961 232 15 15 chr17 32599784 32599981 -62672670 - B3 SINE B2 -19 197 1 3 833 486 0 0 0 chr17 32600017 32600071 -62672580 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 3 833 876 172 14 0 chr17 32600072 32600217 -62672434 - B1_Mur3 SINE Alu -2 147 1 3 833 207 0 0 0 chr17 32600222 32600245 -62672406 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 3 833 429 248 0 62 chr17 32600247 32600359 -62672292 - PB1D7 SINE Alu -15 105 1 3 833 300 348 69 29 chr17 32600527 32600731 -62671920 - B4A SINE B4 0 292 81 3 833 23 33 0 0 chr17 32600735 32600765 -62671886 + AT_rich Low_complexity Low_complexity 1 30 0 3 833 513 315 14 14 chr17 32600765 32600913 -62671738 - RSINE1 SINE B4 -6 159 12 3 833 474 285 1 27 chr17 32601197 32601321 -62671330 - PB1D10 SINE Alu 0 117 1 3 833 827 256 62 15 chr17 32601321 32601595 -62671056 - L1MB3 LINE L1 -275 5908 5622 3 833 870 244 0 24 chr17 32601608 32601772 -62670879 - RSINE1 SINE B4 0 165 6 3 833 408 273 117 9 chr17 32601824 32601935 -62670716 - ID_B1 SINE B4 -14 210 88 3 833 238 345 25 0 chr17 32601944 32602063 -62670588 - L1MB3 LINE L1 -575 5605 5484 3 833 272 329 13 0 chr17 32602073 32602152 -62670499 - ID4 SINE ID -3 80 1 3 833 460 218 10 10 chr17 32602152 32602254 -62670397 - ZP3AR Satellite Satellite -64 148 47 3 833 309 378 36 15 chr17 32602400 32602537 -62670114 - LTR16C LTR ERVL 0 489 350 3 833 360 206 73 130 chr17 32602796 32602919 -62669732 + ID_B1 SINE B4 109 224 0 3 833 260 269 143 0 chr17 32602956 32603075 -62669576 + L1MB5 LINE L1 6009 6144 -30 3 833 21 0 0 0 chr17 32603075 32603096 -62669555 + AT_rich Low_complexity Low_complexity 1 21 0 3 833 244 254 58 29 chr17 32603200 32603269 -62669382 - B1F1 SINE Alu -9 140 70 3 833 1011 202 11 6 chr17 32603322 32603501 -62669150 - B3A SINE B2 -18 180 1 3 833 281 286 0 25 chr17 32603504 32603583 -62669068 - ID_B1 SINE B4 -68 156 80 3 833 384 287 45 36 chr17 32603677 32603789 -62668862 - PB1D10 SINE Alu -35 114 2 3 833 388 271 37 0 chr17 32603832 32603939 -62668712 + PB1 SINE Alu 8 118 -9 3 833 619 246 109 118 chr17 32604089 32604291 -62668360 + B3A SINE B2 1 211 -5 3 833 287 25 0 24 chr17 32604464 32604505 -62668146 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 833 531 0 0 0 chr17 32604505 32604564 -62668087 + (GA)n Simple_repeat Simple_repeat 1 59 0 3 833 279 0 0 0 chr17 32604608 32604639 -62668012 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 833 257 198 12 0 chr17 32604773 32604854 -62667797 + (TAAA)n Simple_repeat Simple_repeat 2 83 0 3 833 451 222 81 0 chr17 32604867 32604966 -62667685 + B3A SINE B2 2 108 -90 3 833 1001 130 0 7 chr17 32605069 32605216 -62667435 - B1_Mus1 SINE Alu -1 147 2 3 833 217 119 48 0 chr17 32605224 32605266 -62667385 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 3 833 264 274 0 0 chr17 32605670 32605732 -62666919 - MIRc SINE MIR -135 133 72 3 833 609 223 149 0 chr17 32605732 32605907 -62666744 + Lx8 LINE L1 6445 6645 -828 3 833 553 175 257 51 chr17 32605960 32606135 -62666516 + B3 SINE B2 3 213 -3 3 833 708 180 13 52 chr17 32606328 32606483 -62666168 - B1_Mur2 SINE Alu 0 149 9 3 833 473 310 0 97 chr17 32606334 32606520 -62666131 - ID_B1 SINE B4 0 224 57 3 833 189 74 0 0 chr17 32606530 32606557 -62666094 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 833 542 289 0 0 chr17 32606558 32606662 -62665989 - PB1D10 SINE Alu -13 104 1 3 833 719 238 7 7 chr17 32606680 32606824 -62665827 - B1F SINE Alu -2 147 4 3 833 1395 171 14 0 chr17 32607112 32607334 -62665317 + URR1B DNA MER1_type 1 225 0 3 833 273 57 0 0 chr17 32607399 32607434 -62665217 + (TC)n Simple_repeat Simple_repeat 1 35 0 3 833 408 162 12 0 chr17 32607489 32607569 -62665082 - ZP3AR Satellite Satellite -89 123 43 3 833 228 137 19 38 chr17 32607647 32607700 -62664951 + GA-rich Low_complexity Low_complexity 4 55 0 3 833 223 253 11 75 chr17 32608332 32608426 -62664225 + L2c LINE L2 3108 3195 -192 3 833 249 179 18 0 chr17 32608576 32608637 -62664014 - PB1D7 SINE Alu -1 119 55 3 833 1194 42 21 0 chr17 32608689 32608832 -62663819 + B1_Mus1 SINE Alu 2 147 -1 3 833 231 114 0 0 chr17 32608859 32608903 -62663748 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 833 433 255 9 38 chr17 32608919 32609025 -62663626 - RSINE1 SINE B4 -56 109 7 3 833 287 104 21 0 chr17 32609069 32609117 -62663534 + (TCC)n Simple_repeat Simple_repeat 1 49 0 3 833 347 325 196 17 chr17 32609473 32609727 -62662924 - L1MB7 LINE L1 -83 6101 5794 3 833 324 94 0 0 chr17 32609727 32609780 -62662871 + (TATG)n Simple_repeat Simple_repeat 2 54 0 3 833 347 325 196 17 chr17 32609780 32609816 -62662835 - L1MB7 LINE L1 -391 5793 5759 3 833 1947 167 178 21 chr17 32610005 32610466 -62662185 - Lx4B LINE L1 -48 7010 6177 3 833 297 0 0 0 chr17 32610500 32610533 -62662118 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 833 657 188 42 8 chr17 32610533 32610651 -62662000 - RSINE1 SINE B4 -41 124 3 3 833 266 181 0 36 chr17 32610671 32610726 -62661925 - ID4_ SINE ID -9 74 20 3 833 391 252 106 49 chr17 32610864 32611006 -62661645 - B4A SINE B4 -141 151 2 3 833 458 247 30 40 chr17 32611221 32611322 -62661329 + RSINE1 SINE B4 29 128 -37 3 833 432 0 0 0 chr17 32611339 32611387 -62661264 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 833 231 373 139 14 chr17 32611695 32611918 -62660733 - L2c LINE L2 -221 3166 2916 3 833 666 203 0 6 chr17 32612458 32612649 -62660002 + (TCCA)n Simple_repeat Simple_repeat 1 189 0 3 833 2084 206 83 6 chr17 32612649 32612737 -62659914 - RLTR16 LTR ERVK 0 505 417 3 833 408 20 0 0 chr17 32612737 32612786 -62659865 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 833 2084 206 83 6 chr17 32612786 32613166 -62659485 - RLTR16 LTR ERVK -89 416 2 3 833 398 320 0 13 chr17 32613166 32613229 -62659422 + (TCCA)n Simple_repeat Simple_repeat 1 63 0 3 833 339 296 0 0 chr17 32613240 32613409 -62659242 + (TCCA)n Simple_repeat Simple_repeat 1 169 0 3 833 348 234 0 0 chr17 32613379 32613473 -62659178 + (CCCA)n Simple_repeat Simple_repeat 3 96 0 3 833 1983 256 65 105 chr17 32613591 32614508 -62658143 - RMER17B LTR ERVK -77 881 1 3 833 228 111 0 0 chr17 32614525 32614561 -62658090 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 3 833 210 300 0 0 chr17 32614618 32614668 -62657983 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 833 371 328 59 17 chr17 32614692 32614810 -62657841 - B4A SINE B4 -88 204 82 3 833 25 0 0 0 chr17 32614810 32614835 -62657816 + AT_rich Low_complexity Low_complexity 1 25 0 3 833 619 281 18 42 chr17 32614845 32614979 -62657672 - RSINE1 SINE B4 0 165 36 3 833 2855 47 84 5 chr17 32614979 32615346 -62657305 + MTA_Mm LTR MaLR 1 396 0 3 833 619 281 18 42 chr17 32615346 32615378 -62657273 - RSINE1 SINE B4 -130 35 3 3 833 303 266 20 41 chr17 32615378 32615468 -62657183 - B4 SINE B4 -203 89 2 3 833 469 261 130 0 chr17 32615523 32615638 -62657013 - ID_B1 SINE B4 -4 220 91 3 833 264 59 0 0 chr17 32616065 32616099 -62656552 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 833 807 296 6 0 chr17 32616116 32616295 -62656356 - B4 SINE B4 0 292 113 3 833 606 283 29 0 chr17 32616321 32616459 -62656192 - RSINE1 SINE B4 -21 144 3 3 833 222 211 0 0 chr17 32616495 32616533 -62656118 - B4 SINE B4 -212 80 43 3 833 189 0 0 0 chr17 32616940 32616961 -62655690 + (TCCC)n Simple_repeat Simple_repeat 1 21 0 3 833 25 51 0 0 chr17 32617085 32617124 -62655527 + AT_rich Low_complexity Low_complexity 1 39 0 3 833 671 249 18 42 chr17 32617138 32617306 -62655345 + RSINE1 SINE B4 1 164 -1 3 833 409 110 27 0 chr17 32617306 32617379 -62655272 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 4 833 631 274 24 60 chr17 32617436 32617603 -62655048 - RSINE1 SINE B4 0 165 5 4 833 501 235 0 38 chr17 32617654 32617760 -62654891 - B1F SINE Alu -30 119 18 4 833 350 265 73 64 chr17 32619331 32619440 -62653211 + B1F SINE Alu 2 111 -38 4 833 396 224 178 17 chr17 32619449 32619567 -62653084 + B1F SINE Alu 11 147 -2 4 833 201 208 0 40 chr17 32619736 32619811 -62652840 + CT-rich Low_complexity Low_complexity 1 72 0 4 833 357 24 0 0 chr17 32619871 32619913 -62652738 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 833 336 226 185 19 chr17 32619919 32620027 -62652624 + B3 SINE B2 87 212 -4 4 833 490 180 84 70 chr17 32620760 32620903 -62651748 + B1_Mur2 SINE Alu 2 146 -3 4 833 423 0 0 0 chr17 32620919 32620966 -62651685 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 833 592 271 6 70 chr17 32620973 32621144 -62651507 - RSINE1 SINE B4 0 165 6 4 833 314 238 47 27 chr17 32621173 32621271 -62651380 - B1F1 SINE Alu -21 99 2 4 833 512 286 69 37 chr17 32621337 32621526 -62651125 - B3A SINE B2 -1 197 3 4 833 216 188 0 20 chr17 32621625 32621674 -62650977 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 833 447 259 85 14 chr17 32621700 32621841 -62650810 - B4A SINE B4 -23 269 119 4 833 1105 104 8 16 chr17 32621861 32622104 -62650547 + (TTTC)n Simple_repeat Simple_repeat 1 240 0 4 833 393 268 0 11 chr17 32622106 32622193 -62650458 - B4A SINE B4 -206 86 1 4 833 862 255 60 0 chr17 32622213 32622397 -62650254 - B3A SINE B2 0 198 4 4 833 680 264 7 23 chr17 32622425 32622602 -62650049 - ID_B1 SINE B4 0 224 57 4 833 254 240 133 0 chr17 32622835 32622910 -62649741 + B1_Mus1 SINE Alu 6 90 -58 4 833 431 381 0 0 chr17 32622925 32623051 -62649600 - RSINE1 SINE B4 -38 127 2 4 833 372 297 30 0 chr17 32623211 32623312 -62649339 + PB1D7 SINE Alu 1 104 -16 4 833 666 288 0 0 chr17 32623348 32623494 -62649157 + RSINE1 SINE B4 14 159 -6 4 833 203 259 0 0 chr17 32623550 32623604 -62649047 + GA-rich Low_complexity Low_complexity 2 55 0 4 833 300 294 83 33 chr17 32624038 32624173 -62648478 + MIRc SINE MIR 24 167 -101 4 833 606 251 59 0 chr17 32624643 32624810 -62647841 + ID_B1 SINE B4 55 224 0 4 833 782 221 136 103 chr17 32624814 32624891 -62647760 + B4 SINE B4 2 86 -206 4 833 1820 163 138 3 chr17 32624891 32625224 -62647427 - ORR1C1 LTR MaLR 0 378 1 4 833 782 221 136 103 chr17 32625224 32625418 -62647233 + B4 SINE B4 87 282 -10 4 833 309 338 80 42 chr17 32625461 32625699 -62646952 + MER113 DNA MER1_type 136 382 -139 4 833 691 248 13 25 chr17 32625704 32625861 -62646790 + B3A SINE B2 2 156 -42 4 833 449 286 0 0 chr17 32625893 32626005 -62646646 + PB1D7 SINE Alu 1 112 -8 4 833 369 0 0 0 chr17 32626007 32626048 -62646603 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 833 250 322 0 0 chr17 32626379 32626438 -62646213 - ID4 SINE ID -22 61 3 4 833 180 0 0 0 chr17 32626460 32626480 -62646171 + (ATTG)n Simple_repeat Simple_repeat 1 20 0 4 833 231 273 0 0 chr17 32626480 32626535 -62646116 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 833 420 300 122 8 chr17 32626826 32626957 -62645694 - MTE2a LTR MaLR 0 379 234 4 833 504 298 48 24 chr17 32626946 32627111 -62645540 + B3A SINE B2 30 198 0 4 833 365 274 44 0 chr17 32627119 32627232 -62645419 - MTE2a LTR MaLR -301 120 3 4 833 351 65 0 0 chr17 32627391 32627437 -62645214 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 833 364 317 41 16 chr17 32627437 32627553 -62645098 - RSINE1 SINE B4 -36 129 10 4 833 270 0 0 0 chr17 32628004 32628034 -62644617 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 833 444 340 110 28 chr17 32628263 32628632 -62644019 - L2b LINE L2 -10 3365 2967 4 833 248 343 109 29 chr17 32629058 32629196 -62643455 - MIRb SINE MIR -80 188 40 4 833 259 235 70 20 chr17 32630458 32630558 -62642093 - L2c LINE L2 -263 3124 3020 4 833 339 231 45 63 chr17 32632148 32632259 -62640392 + LTR16C LTR ERVL 357 465 -24 4 833 310 284 25 0 chr17 32632246 32632327 -62640324 + LTR16C LTR ERVL 407 489 0 4 833 2896 129 128 19 chr17 32632354 32633078 -62639573 - RLTR13D3 LTR ERVK -19 1095 1 4 833 1213 202 26 49 chr17 32633134 32633400 -62639251 + RMER10A LTR ERVL 2 261 -181 4 833 2079 122 48 0 chr17 32633403 32633715 -62638936 + ORR1A2 LTR MaLR 1 327 0 4 833 278 301 91 38 chr17 32633891 32634095 -62638556 + MLT1F LTR MaLR 177 343 -205 4 833 804 145 13 58 chr17 32634561 32634715 -62637936 - RMER10A LTR ERVL 0 442 296 4 833 239 318 0 0 chr17 32634743 32634828 -62637823 - L1M1 LINE L1 -444 5856 5772 4 833 959 239 106 47 chr17 32634848 32635217 -62637434 + RMER15 LTR ERVL 69 575 0 4 833 25 0 0 0 chr17 32635218 32635243 -62637408 + AT_rich Low_complexity Low_complexity 1 25 0 4 833 819 255 69 0 chr17 32635243 32635431 -62637220 - B3 SINE B2 -14 202 2 4 833 1847 286 150 17 chr17 32635449 32636030 -62636621 - MTEa-int LTR MaLR -223 1357 700 4 833 450 0 0 0 chr17 32636034 32636084 -62636567 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 833 2272 112 201 8 chr17 32636259 32636637 -62636014 - MT2B LTR ERVL -150 451 1 4 833 1065 221 70 159 chr17 32636637 32636873 -62635778 - RLTR12B LTR ERVK -37 491 292 4 104 4724 121 73 27 chr17 32636873 32637644 -62635007 - RLTR13D1 LTR ERVK 0 806 1 4 834 1065 221 70 159 chr17 32637644 32637855 -62634796 - RLTR12B LTR ERVK -237 291 86 4 834 2728 172 45 21 chr17 32637855 32638371 -62634280 + RLTR12B LTR ERVK 1 528 0 4 834 1065 221 70 159 chr17 32638371 32638411 -62634240 - RLTR12B LTR ERVK -443 85 47 4 834 270 176 39 0 chr17 32638445 32638496 -62634155 - MTEa-int LTR MaLR -1252 328 276 4 834 912 188 123 0 chr17 32638518 32638688 -62633963 - B3 SINE B2 -24 192 2 4 834 1093 282 31 3 chr17 32638688 32638980 -62633671 - MTEa-int LTR MaLR -1279 301 2 4 834 481 228 244 6 chr17 32638985 32639157 -62633494 - MTEa LTR MaLR -4 375 163 4 834 527 281 29 7 chr17 32639346 32639486 -62633165 - RSINE1 SINE B4 -19 146 4 4 834 263 276 0 0 chr17 32639511 32639569 -62633082 - RMER15 LTR ERVL -115 460 403 4 834 2103 273 88 52 chr17 32639597 32640068 -62632583 - Lx8 LINE L1 -216 7257 6742 4 834 1994 164 123 24 chr17 32640068 32640449 -62632202 + MTD LTR MaLR 1 419 0 4 834 2103 273 88 52 chr17 32640449 32640647 -62632004 - Lx8 LINE L1 -732 6741 6558 4 834 1313 238 23 79 chr17 32640647 32641039 -62631612 - ORR1D2 LTR MaLR 0 370 1 4 834 2103 273 88 52 chr17 32641039 32641160 -62631491 - Lx8 LINE L1 -916 6557 6437 4 834 667 280 60 0 chr17 32641161 32641329 -62631322 - MTEa LTR MaLR -200 179 2 4 834 467 188 19 3 chr17 32641347 32641459 -62631192 + MTE2a LTR MaLR 1 107 -272 4 834 291 267 12 0 chr17 32641460 32641546 -62631105 - L1_Rod LINE L1 -3165 2682 2596 4 834 338 150 0 32 chr17 32641585 32641647 -62631004 + B1_Mur3 SINE Alu 50 109 -40 4 834 297 0 0 0 chr17 32641730 32641763 -62630888 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 834 255 194 0 162 chr17 32641875 32641949 -62630702 - RSINE1 SINE B4 -98 67 6 4 834 448 267 105 138 chr17 32641960 32642100 -62630551 - L1_Mur3 LINE L1 -3513 2367 2259 4 834 360 0 0 0 chr17 32642100 32642140 -62630511 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 834 558 260 13 27 chr17 32642146 32642296 -62630355 - RSINE1 SINE B4 -16 149 2 4 834 448 267 105 138 chr17 32642296 32642516 -62630135 - L1_Mur3 LINE L1 -3622 2258 2010 4 834 207 0 0 0 chr17 32642516 32642539 -62630112 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4 834 448 267 105 138 chr17 32642539 32642856 -62629795 - L1_Mur3 LINE L1 -3871 2009 1706 4 834 257 0 30 0 chr17 32643335 32643368 -62629283 + (CCCCCG)n Simple_repeat Simple_repeat 2 35 0 4 834 180 0 0 0 chr17 32644318 32644338 -62628313 + (CACCC)n Simple_repeat Simple_repeat 3 22 0 4 834 359 162 0 26 chr17 32644527 32644603 -62628048 + CT-rich Low_complexity Low_complexity 2 75 0 4 834 316 65 103 0 chr17 32644616 32644723 -62627928 + (TA)n Simple_repeat Simple_repeat 1 118 0 4 834 947 257 10 0 chr17 32644723 32644929 -62627722 - B3 SINE B2 -8 208 1 4 834 412 312 103 0 chr17 32645640 32645837 -62626814 - MTEa LTR MaLR -150 229 4 4 834 4018 271 87 57 chr17 32645843 32646193 -62626458 - MERVL_2A-int LTR ERVL -3 5758 5396 4 834 1429 82 0 5 chr17 32646193 32646377 -62626274 - B2_Mm2 SINE B2 -11 184 2 4 834 4018 271 87 57 chr17 32646377 32647035 -62625616 - MERVL_2A-int LTR ERVL -366 5395 4721 4 834 303 93 0 0 chr17 32647035 32647078 -62625573 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 834 4018 271 87 57 chr17 32647078 32647764 -62624887 - MERVL_2A-int LTR ERVL -1041 4720 4012 4 834 273 29 0 0 chr17 32648052 32648086 -62624565 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 834 7475 45 12 1 chr17 32648088 32648980 -62623671 - L1Md_F2 LINE L1 -19 6563 5662 4 834 924 246 83 23 chr17 32648984 32649384 -62623267 - MERVL_2A-int LTR ERVL -1813 3901 3464 4 834 366 23 0 0 chr17 32649387 32649430 -62623221 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 834 348 24 0 0 chr17 32649467 32649508 -62623143 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 834 1091 318 121 88 chr17 32649522 32650004 -62622647 - MERVL_2A-int LTR ERVL -4753 1008 498 4 834 754 144 69 41 chr17 32650004 32650149 -62622502 + B1_Mur4 SINE Alu 2 150 0 4 834 1091 318 121 88 chr17 32650149 32650258 -62622393 - MERVL_2A-int LTR ERVL -5264 497 426 4 834 1214 61 0 0 chr17 32650258 32650405 -62622246 + B1_Mus1 SINE Alu 2 148 0 4 834 1091 318 121 88 chr17 32650405 32650561 -62622090 - MERVL_2A-int LTR ERVL -5336 425 232 4 834 4784 102 79 119 chr17 32650561 32651485 -62621166 - RMER17D LTR ERVK -2 887 1 4 834 1091 318 121 88 chr17 32651485 32651587 -62621064 - MERVL_2A-int LTR ERVL -5530 231 130 4 834 314 179 224 35 chr17 32651599 32651715 -62620936 - ORR1E LTR MaLR 0 370 233 4 834 729 168 0 0 chr17 32651715 32651894 -62620757 + GA-rich Low_complexity Low_complexity 2 180 0 4 834 456 187 0 0 chr17 32651921 32652044 -62620607 + GA-rich Low_complexity Low_complexity 2 124 0 4 834 815 238 44 6 chr17 32652046 32652228 -62620423 - ORR1E LTR MaLR -170 189 1 4 834 300 111 0 0 chr17 32652308 32652353 -62620298 + (T)n Simple_repeat Simple_repeat 1 45 0 4 834 3271 49 3 3 chr17 32652362 32652754 -62619897 + MTA_Mm LTR MaLR 1 392 -4 4 834 1011 96 0 0 chr17 32652754 32652889 -62619762 - B1_Mus1 SINE Alu -12 136 2 4 834 605 342 55 39 chr17 32652929 32653236 -62619415 - MT2A LTR ERVL 0 533 222 4 834 291 364 49 65 chr17 32653236 32653421 -62619230 - MTEa LTR MaLR -197 182 1 4 834 209 108 0 26 chr17 32654390 32654428 -62618223 + (TCCA)n Simple_repeat Simple_repeat 1 37 0 4 834 660 268 81 16 chr17 32654435 32654621 -62618030 + B3A SINE B2 1 198 0 4 834 381 153 0 0 chr17 32655295 32655367 -62617284 + CT-rich Low_complexity Low_complexity 1 72 0 4 834 1242 67 0 0 chr17 32655367 32655532 -62617119 + (TTTC)n Simple_repeat Simple_repeat 2 166 0 5 834 1262 41 0 0 chr17 32655535 32655682 -62616969 - B1_Mus2 SINE Alu 0 147 1 5 834 345 299 97 7 chr17 32655705 32655850 -62616801 - MLT1K LTR MaLR -62 533 376 5 834 295 253 77 0 chr17 32656160 32656267 -62616384 + B1_Mm SINE Alu 2 119 -1 5 834 200 176 39 0 chr17 32657630 32657681 -62614970 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 834 568 178 178 0 chr17 32657692 32657810 -62614841 - B1_Mur4 SINE Alu -5 145 7 5 834 378 0 0 0 chr17 32657836 32657878 -62614773 + (TC)n Simple_repeat Simple_repeat 1 42 0 5 834 590 254 171 0 chr17 32657879 32658060 -62614591 - B3 SINE B2 -4 212 1 5 834 247 379 17 51 chr17 32658084 32658262 -62614389 - MIRb SINE MIR -4 264 93 5 834 902 259 112 101 chr17 32658341 32658797 -62613854 + RMER6B LTR ERVK 1 461 0 5 834 192 40 0 0 chr17 32658968 32658993 -62613658 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 834 1043 263 144 13 chr17 32659899 32660211 -62612440 - ORR1E LTR MaLR -1 358 6 5 834 435 157 0 0 chr17 32660212 32660301 -62612350 + CT-rich Low_complexity Low_complexity 1 89 0 5 834 494 336 24 0 chr17 32660310 32660435 -62612216 - B1F SINE Alu -21 128 1 5 834 245 282 48 97 chr17 32660435 32660518 -62612133 + YREP_Mm Unknown Unknown 317 392 -1420 5 834 213 173 39 0 chr17 32660688 32660740 -62611911 + (CATCC)n Simple_repeat Simple_repeat 3 56 0 5 834 27 62 0 0 chr17 32661965 32662013 -62610638 + AT_rich Low_complexity Low_complexity 1 48 0 5 834 309 109 0 0 chr17 32662023 32662069 -62610582 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 834 419 342 20 0 chr17 32662079 32662225 -62610426 - RSINE1 SINE B4 -13 152 4 5 834 189 0 0 0 chr17 32662267 32662288 -62610363 + (TCC)n Simple_repeat Simple_repeat 2 22 0 5 834 279 0 0 0 chr17 32662435 32662466 -62610185 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 834 1110 83 0 0 chr17 32662540 32662685 -62609966 - B1_Mus1 SINE Alu 0 148 4 5 834 793 87 143 0 chr17 32662685 32662697 -62609954 - B2_Mm1t SINE B2 -2 191 180 5 834 207 0 0 0 chr17 32662697 32662720 -62609931 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 834 793 87 143 0 chr17 32662720 32662833 -62609818 - B2_Mm1t SINE B2 -14 179 49 5 834 21 0 0 0 chr17 32662961 32662982 -62609669 + AT_rich Low_complexity Low_complexity 1 21 0 5 834 659 240 44 28 chr17 32663179 32663359 -62609292 - B3A SINE B2 0 198 16 5 834 265 300 38 0 chr17 32663539 32663619 -62609032 - ID_B1 SINE B4 -31 193 111 5 834 595 227 30 15 chr17 32663828 32663962 -62608689 + ID_B1 SINE B4 88 223 -1 5 834 458 232 173 16 chr17 32663972 32664099 -62608552 + B1_Mur1 SINE Alu 3 149 0 5 834 747 252 132 16 chr17 32664111 32664369 -62608282 + B4A SINE B4 3 290 -2 5 834 462 79 0 0 chr17 32664500 32664563 -62608088 + (TG)n Simple_repeat Simple_repeat 1 63 0 5 834 380 308 53 27 chr17 32664588 32664738 -62607913 - RSINE1 SINE B4 -7 158 5 5 834 216 97 0 0 chr17 32666136 32666167 -62606484 + (T)n Simple_repeat Simple_repeat 1 31 0 5 834 304 268 41 74 chr17 32666167 32666288 -62606363 - PB1D7 SINE Alu 0 120 4 5 834 668 214 32 9 chr17 32666500 32666659 -62605992 + B4A SINE B4 119 274 -18 5 834 408 20 0 0 chr17 32666677 32666726 -62605925 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 834 291 279 114 0 chr17 32666782 32666861 -62605790 + B1F SINE Alu 54 141 -8 5 834 250 295 77 0 chr17 32666791 32666869 -62605782 + ID_B1 SINE B4 141 224 0 5 834 1379 105 16 0 chr17 32666912 32667103 -62605548 + B2_Mm2 SINE B2 2 195 0 5 834 244 263 0 0 chr17 32667205 32667262 -62605389 - ID2 SINE ID -20 63 7 5 834 252 292 108 45 chr17 32667334 32667445 -62605206 - MLT1G1 LTR MaLR -82 497 380 5 834 310 108 31 0 chr17 32667673 32667738 -62604913 + (TC)n Simple_repeat Simple_repeat 2 68 0 5 834 399 265 10 0 chr17 32667761 32667859 -62604792 - B3A SINE B2 -99 99 1 5 834 837 129 18 61 chr17 32668142 32668307 -62604344 + URR1B DNA MER1_type 65 222 -3 5 834 3304 79 16 13 chr17 32668337 32668788 -62603863 - RLTR44E LTR ERVK 0 452 1 5 834 2505 290 104 78 chr17 32668826 32670167 -62602484 - MTE-int LTR MaLR -49 1531 157 5 834 550 200 9 9 chr17 32670240 32670356 -62602295 - RMER19A LTR ERVK -2 735 620 5 834 729 116 9 0 chr17 32670349 32670461 -62602190 + B1_Mus1 SINE Alu 35 147 -1 5 834 252 0 0 0 chr17 32670468 32670496 -62602155 + (A)n Simple_repeat Simple_repeat 1 28 0 5 834 1258 241 199 10 chr17 32670497 32671007 -62601644 - RMER19A LTR ERVK -175 562 1 5 834 280 149 0 0 chr17 32671279 32671326 -62601325 + RLTR15 LTR ERVK 1 47 -312 5 834 356 310 31 25 chr17 32671321 32671480 -62601171 - MTEa LTR MaLR -215 164 5 5 834 329 211 14 0 chr17 32671551 32671622 -62601029 - ID_B1 SINE B4 -53 171 100 5 834 824 246 18 41 chr17 32671987 32672207 -62600444 + B3 SINE B2 2 216 0 5 834 212 244 0 49 chr17 32673772 32673854 -62598797 + CT-rich Low_complexity Low_complexity 1 78 0 5 834 943 171 3 8 chr17 32675373 32675736 -62596915 + CT-rich Low_complexity Low_complexity 1 360 0 5 834 446 207 80 35 chr17 32675767 32675892 -62596759 - B1_Mur3 SINE Alu -20 130 1 5 834 1104 20 20 0 chr17 32676597 32676744 -62595907 + (CA)n Simple_repeat Simple_repeat 2 151 0 5 834 222 174 0 0 chr17 32676952 32676998 -62595653 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 5 834 220 268 18 0 chr17 32677603 32677659 -62594992 + ID4 SINE ID 8 64 -19 5 834 513 275 49 12 chr17 32677749 32677911 -62594740 - B4A SINE B4 -2 290 123 5 834 589 243 59 0 chr17 32677963 32678099 -62594552 - B1_Mur3 SINE Alu -1 148 5 5 834 733 240 92 0 chr17 32678103 32678299 -62594352 - B3 SINE B2 0 216 3 5 834 227 312 138 0 chr17 32680003 32680112 -62592539 + MIRc SINE MIR 42 165 -103 5 834 222 309 42 11 chr17 32680283 32680378 -62592273 + PB1D10 SINE Alu 1 98 -19 5 834 564 212 29 21 chr17 32681258 32681398 -62591253 - ID_B1 SINE B4 0 224 84 5 834 1585 146 17 37 chr17 32682373 32682609 -62590042 - ORR1B1 LTR MaLR -8 386 151 5 834 4003 97 34 0 chr17 32682609 32683176 -62589475 + L1_Mus3 LINE L1 6050 6635 -3 5 834 1585 146 17 37 chr17 32683176 32683237 -62589414 - ORR1B1 LTR MaLR -244 150 95 5 834 680 151 95 7 chr17 32684073 32684220 -62588431 + B2_Mm2 SINE B2 36 195 0 5 834 639 220 8 15 chr17 32684393 32684527 -62588124 - B1_Mur1 SINE Alu 0 149 17 5 834 292 262 28 18 chr17 32684550 32684659 -62587992 - ID_B1 SINE B4 -7 217 108 5 834 333 117 0 0 chr17 32685038 32685098 -62587553 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 834 4763 149 64 12 chr17 32685098 32686001 -62586650 - RMER17B LTR ERVK -1 957 8 5 834 511 62 12 12 chr17 32686002 32686083 -62586568 + (CA)n Simple_repeat Simple_repeat 1 81 0 5 834 688 228 0 0 chr17 32686357 32686493 -62586158 + B1_Mus1 SINE Alu 1 136 -12 5 834 378 0 0 0 chr17 32686494 32686536 -62586115 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 5 834 2108 135 58 23 chr17 32688464 32688859 -62583792 + RLTR9E LTR ERVK 1 409 0 5 834 488 289 22 70 chr17 32688861 32689174 -62583477 + ETnERV2-int LTR ERVK 2 299 -4545 5 834 8115 171 52 27 chr17 32689165 32691341 -62581310 + ETnERV2-int LTR ERVK 724 3735 -3671 5 834 4889 48 2 10 chr17 32691341 32691933 -62580718 - LTRIS_Mus LTR ERV1 0 587 1 5 834 8115 138 24 12 chr17 32691933 32692078 -62580573 + ETnERV2-int LTR ERVK 3736 3874 -3532 5 834 25 0 0 0 chr17 32692078 32692103 -62580548 + AT_rich Low_complexity Low_complexity 1 25 0 5 834 38735 39 4 8 chr17 32692103 32698073 -62574578 - L1Md_F2 LINE L1 -2 6580 642 5 834 18947 93 17 23 chr17 32698075 32700646 -62572005 + ETnERV2-int LTR ERVK 3866 6421 -985 5 834 354 190 0 48 chr17 32700855 32700938 -62571713 + ETnERV2-int LTR ERVK 7327 7405 -1 5 834 2013 128 69 25 chr17 32700938 32701330 -62571321 + RLTR9E LTR ERVK 1 409 0 5 834 191 36 36 0 chr17 32701350 32701378 -62571273 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 834 231 327 18 63 chr17 32701378 32701489 -62571162 - PB1D7 SINE Alu -11 109 4 5 834 619 229 21 0 chr17 32701723 32701863 -62570788 + B4A SINE B4 132 274 -18 5 834 477 0 0 0 chr17 32701881 32701934 -62570717 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 834 245 280 120 0 chr17 32701995 32702070 -62570581 + B1F SINE Alu 59 142 -7 5 834 1239 136 16 0 chr17 32702120 32702311 -62570340 + B2_Mm2 SINE B2 2 195 0 5 834 32954 83 16 6 chr17 32702362 32707650 -62565001 + L1Md_F2 LINE L1 208 5585 -298 5 834 7633 58 23 3 chr17 32707651 32708614 -62564037 + L1Md_F2 LINE L1 5587 6568 -14 5 834 244 263 0 0 chr17 32708675 32708732 -62563919 - ID2 SINE ID -20 63 7 5 834 242 296 90 27 chr17 32708804 32708915 -62563736 - MLT1G1 LTR MaLR -82 497 380 5 834 325 95 32 0 chr17 32709142 32709205 -62563446 + (TC)n Simple_repeat Simple_repeat 2 66 0 5 834 408 255 10 0 chr17 32709228 32709326 -62563325 - B3A SINE B2 -99 99 1 5 834 873 169 105 25 chr17 32709567 32709767 -62562884 + URR1B DNA MER1_type 4 219 -6 5 834 2830 299 85 62 chr17 32709832 32711177 -62561474 - MTEa-int LTR MaLR -49 1531 157 5 834 1121 238 67 61 chr17 32711250 32711782 -62560869 - RMER19A LTR ERVK -2 735 1 5 834 667 220 16 36 chr17 32712067 32712260 -62560391 + RLTR15 LTR ERVK 1 189 -170 5 834 547 287 13 0 chr17 32712508 32712665 -62559986 - MTEa-int LTR MaLR -1421 159 1 5 834 1043 279 35 19 chr17 32712665 32713034 -62559617 - MTEa LTR MaLR 0 379 5 5 834 305 225 14 0 chr17 32713105 32713176 -62559475 - ID_B1 SINE B4 -53 171 100 5 834 623 260 49 25 chr17 32715720 32715964 -62556687 - LTRIS4 LTR ERV1 0 519 276 5 834 2465 117 46 62 chr17 32716262 32716510 -62556141 - RLTR23 LTR ERV1 0 430 204 5 834 207 0 0 0 chr17 32716510 32716533 -62556118 + (TGGGGG)n Simple_repeat Simple_repeat 2 24 0 5 834 2465 117 46 62 chr17 32716533 32716721 -62555930 - RLTR23 LTR ERV1 -227 203 1 5 834 2067 104 282 10 chr17 32717126 32717544 -62555107 + RLTR47_MM LTR ERV1 1 532 0 5 834 364 302 50 57 chr17 32718060 32718362 -62554289 + MuRRS4-int LTR ERV1 496 901 -6877 5 834 1263 314 24 35 chr17 32718706 32719384 -62553267 + MuRRS4-int LTR ERV1 1040 1709 -3354 5 834 4158 125 87 16 chr17 32719570 32719903 -62552748 - RMER17D2 LTR ERVK 0 809 451 6 834 297 0 0 0 chr17 32719903 32719936 -62552715 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 834 4158 125 87 16 chr17 32719936 32720357 -62552294 - RMER17D2 LTR ERVK -359 450 2 6 834 328 219 0 0 chr17 32720575 32720639 -62552012 + MuRRS4-int LTR ERV1 3533 3596 -1467 5 834 1392 211 38 29 chr17 32720639 32720980 -62551671 + RLTR13D1 LTR ERVK 1 344 -462 6 834 8220 55 6 1 chr17 32720980 32722001 -62550650 - L1Md_F2 LINE L1 0 6582 5586 6 834 3709 107 2 37 chr17 32722001 32722595 -62550056 + RLTR13D3 LTR ERVK 542 1114 0 6 834 1637 262 39 17 chr17 32722595 32723011 -62549640 + MuRRS4-int LTR ERV1 3591 4015 -1048 5 834 31277 105 36 10 chr17 32724059 32730419 -62542232 + L1_Mus1 LINE L1 98 6567 0 6 834 3818 165 106 10 chr17 32731170 32731960 -62540691 + RMER19B LTR ERVK 51 895 -7 6 834 347 345 0 0 chr17 32731985 32732104 -62540547 + MMERGLN-int LTR ERV1 5429 5547 -2009 6 834 1493 155 124 0 chr17 32732281 32732572 -62540079 + IAPEY3_LTR LTR ERVK 1 327 -5 6 834 8245 126 26 24 chr17 32732575 32733863 -62538788 + IAPEY3-int LTR ERVK 1 1291 -6389 6 834 2293 42 0 0 chr17 32733855 32734117 -62538534 + IAPEY3-int LTR ERVK 5283 5544 -2136 6 834 2806 89 42 0 chr17 32734113 32734495 -62538156 + IAPEY3-int LTR ERVK 6941 7338 -342 6 834 1442 198 52 12 chr17 32734512 32734855 -62537796 + IAPEz-int LTR ERVK 6125 6481 0 6 834 1552 127 124 0 chr17 32734855 32735146 -62537505 + IAPEY3_LTR LTR ERVK 1 327 -5 6 834 413 351 34 22 chr17 32735491 32735759 -62536892 + MuRRS4-int LTR ERV1 4663 4933 -130 5 834 23 0 0 0 chr17 32735840 32735863 -62536788 + AT_rich Low_complexity Low_complexity 1 23 0 6 834 2614 91 182 0 chr17 32735871 32736321 -62536330 + RLTR47_MM LTR ERV1 1 532 0 6 834 369 0 0 0 chr17 32736783 32736824 -62535827 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 834 649 337 42 43 chr17 32737689 32738181 -62534470 - RLTR6-int LTR ERV1 -126 7652 7341 6 834 29 0 0 0 chr17 32739123 32739152 -62533499 + AT_rich Low_complexity Low_complexity 1 29 0 6 834 236 54 0 0 chr17 32739153 32739190 -62533461 - B1_Mur4 SINE Alu -1 149 113 6 834 393 0 0 0 chr17 32739659 32739706 -62532945 - MTA_Mm LTR MaLR -2 398 352 6 834 1429 42 5 0 chr17 32739703 32739892 -62532759 - MTA_Mm LTR MaLR -206 190 1 6 834 6514 71 52 63 chr17 32739897 32741000 -62531651 - MTA_Mm-int LTR MaLR -7 1091 1 6 834 3378 40 2 0 chr17 32741000 32741395 -62531256 - MTA_Mm LTR MaLR 0 396 1 6 834 432 0 0 0 chr17 32741989 32742037 -62530614 + (TC)n Simple_repeat Simple_repeat 1 48 0 6 834 189 0 0 0 chr17 32742037 32742057 -62530594 + (CA)n Simple_repeat Simple_repeat 1 21 0 6 834 1203 220 27 101 chr17 32742103 32742431 -62530220 + ORR1B1 LTR MaLR 35 338 -56 6 834 402 255 83 0 chr17 32742559 32742716 -62529935 + L1MA6 LINE L1 6035 6204 -96 6 834 1079 73 0 26 chr17 32743090 32743244 -62529407 + B2_Mm2 SINE B2 2 151 -44 6 834 264 59 0 0 chr17 32743244 32743278 -62529373 + (TAA)n Simple_repeat Simple_repeat 3 36 0 6 834 594 241 20 27 chr17 32743374 32743523 -62529128 - B1_Mur1 SINE Alu -1 148 1 6 834 360 0 0 0 chr17 32743693 32743733 -62528918 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 834 1800 172 66 11 chr17 32744022 32744212 -62528439 - ORR1C2 LTR MaLR 0 384 189 6 834 1023 71 0 0 chr17 32744212 32744366 -62528285 + (GA)n Simple_repeat Simple_repeat 1 154 0 6 834 1800 172 66 11 chr17 32744366 32744539 -62528112 - ORR1C2 LTR MaLR -196 188 2 6 834 5367 173 9 14 chr17 32745499 32746478 -62526173 - Lx2B LINE L1 -3 6997 6024 6 834 2743 133 0 0 chr17 32746478 32746890 -62525761 + L1_Mur2 LINE L1 4091 4502 -1375 6 834 695 255 74 53 chr17 32746961 32747015 -62525636 - B4A SINE B4 -43 249 192 6 834 7024 58 30 0 chr17 32747015 32747882 -62524769 - RLTR13B1 LTR ERVK 0 893 1 6 834 695 255 74 53 chr17 32747882 32748071 -62524580 - B4A SINE B4 -101 191 1 6 834 539 246 51 21 chr17 32748461 32748698 -62523953 - RLTR15 LTR ERVK -115 244 1 6 834 463 297 38 44 chr17 32748918 32749101 -62523550 - B3A SINE B2 -15 183 2 6 834 254 321 139 0 chr17 32749178 32749311 -62523340 - MTE-int LTR MaLR -62 1518 1367 6 834 1996 140 100 3 chr17 32749311 32749901 -62522750 - RMER19A LTR ERVK 0 737 32 6 834 1385 345 47 43 chr17 32749902 32751027 -62521624 - MuLV-int LTR ERV1 -2424 5182 4053 6 834 2861 51 0 10 chr17 32751080 32751473 -62521178 + MTA_Mm LTR MaLR 1 389 -7 6 834 854 101 0 8 chr17 32751472 32751602 -62521049 - MTA_Mm LTR MaLR -267 129 1 6 834 6428 81 103 74 chr17 32751602 32752669 -62519982 - MTA_Mm-int LTR MaLR 0 1098 1 6 834 3828 47 19 29 chr17 32752671 32753151 -62519500 - MT2C_Mm LTR ERVL 0 475 1 6 834 2180 340 87 51 chr17 32753218 32755872 -62516779 - MuLV-int LTR ERV1 -3682 3924 1040 6 834 280 312 30 64 chr17 32756322 32756558 -62516093 - MuLV-int LTR ERV1 -4498 565 338 6 834 977 127 0 6 chr17 32760056 32760111 -62512540 + (TTC)n Simple_repeat Simple_repeat 1 55 0 6 834 1121 118 6 0 chr17 32760111 32760289 -62512362 + (TCC)n Simple_repeat Simple_repeat 2 180 0 6 834 977 127 0 6 chr17 32760289 32760400 -62512251 + (TTC)n Simple_repeat Simple_repeat 1 111 0 6 834 404 230 0 12 chr17 32760423 32760590 -62512061 + CT-rich Low_complexity Low_complexity 2 166 0 6 834 480 222 111 0 chr17 32760621 32760738 -62511913 - B1_Mur4 SINE Alu -20 130 1 6 834 228 204 20 0 chr17 32761562 32761611 -62511040 + (TA)n Simple_repeat Simple_repeat 1 50 0 6 834 653 56 11 0 chr17 32761725 32761815 -62510836 + (TCTA)n Simple_repeat Simple_repeat 3 93 0 6 834 540 309 6 6 chr17 32762600 32762769 -62509882 - B4A SINE B4 -2 290 122 6 834 572 250 59 0 chr17 32762820 32762956 -62509695 - B1_Mur3 SINE Alu -1 148 5 6 834 728 238 93 0 chr17 32762960 32763153 -62509498 - B3 SINE B2 0 216 6 6 834 294 278 27 18 chr17 32765154 32765264 -62507387 + PB1D10 SINE Alu 1 111 -6 6 834 204 225 127 0 chr17 32765615 32765686 -62506965 - MIRc SINE MIR -121 147 68 6 834 386 279 88 0 chr17 32766184 32766320 -62506331 - B1F SINE Alu 0 149 2 6 834 1572 150 17 37 chr17 32767297 32767533 -62505118 - ORR1B1 LTR MaLR -8 386 155 6 104 4151 93 30 0 chr17 32767533 32768104 -62504547 + L1_Mus3 LINE L1 6050 6637 -1 6 835 1572 150 17 37 chr17 32768104 32768165 -62504486 - ORR1B1 LTR MaLR -240 154 95 6 835 679 155 71 8 chr17 32768996 32769145 -62503506 + B2_Mm2 SINE B2 28 188 -5 6 835 698 204 0 14 chr17 32769297 32769441 -62503210 - B1_Mur1 SINE Alu 0 149 8 6 835 349 23 0 0 chr17 32769529 32769573 -62503078 - IAPLTR2b LTR ERVK -50 277 234 6 835 7023 63 7 6 chr17 32769844 32770732 -62501919 - L1_Mus1 LINE L1 -2 6565 5698 6 835 225 248 64 13 chr17 32772831 32772929 -62499722 + PB1D10 SINE Alu 1 107 -42 6 835 2181 168 33 7 chr17 32772916 32773337 -62499314 + RLTR28 LTR ERVL 38 469 -55 6 835 514 200 145 8 chr17 32773902 32774033 -62498618 - B1_Mur4 SINE Alu -1 149 1 6 835 461 291 105 5 chr17 32774094 32774284 -62498367 + RMER15 LTR ERVL 310 518 -57 6 835 515 182 10 0 chr17 32774313 32774412 -62498239 - RMER15 LTR ERVL -53 522 423 6 835 372 270 20 0 chr17 32774410 32774510 -62498141 - RMER15 LTR ERVL -265 310 209 6 835 231 247 117 58 chr17 32775061 32775164 -62497487 - RLTR20D LTR ERVK -400 168 60 6 835 1535 133 154 0 chr17 32775217 32775510 -62497141 + MTC LTR MaLR 75 412 -9 6 835 659 264 30 126 chr17 32775573 32775803 -62496848 - B4A SINE B4 -84 208 1 6 835 3015 149 16 4 chr17 32776281 32776798 -62495853 - RLTR11A LTR ERVK 0 528 6 6 835 573 241 94 39 chr17 32776868 32777049 -62495602 + RMER15 LTR ERVL 294 484 -91 6 835 732 306 15 15 chr17 32777049 32777245 -62495406 + RMER15-int LTR ERVL 49 244 -4755 6 835 237 108 0 0 chr17 32777249 32777286 -62495365 + (CTCTG)n Simple_repeat Simple_repeat 4 40 0 6 835 598 281 42 47 chr17 32777316 32777772 -62494879 + RMER15-int LTR ERVL 216 749 -4250 6 835 1023 281 99 9 chr17 32778097 32778420 -62494231 + RMER15-int LTR ERVL 2087 2438 -2561 6 835 1033 90 45 9 chr17 32778432 32778596 -62494055 - ORR1A3 LTR MaLR -8 386 174 6 835 213 39 0 0 chr17 32779209 32779235 -62493416 + (TCC)n Simple_repeat Simple_repeat 3 28 0 6 835 23 54 0 0 chr17 32779992 32780029 -62492622 + AT_rich Low_complexity Low_complexity 1 37 0 6 835 3573 35 28 12 chr17 32780216 32780645 -62492006 - RLTR10C LTR ERVK 0 436 1 6 835 245 329 0 0 chr17 32781219 32781295 -62491356 + (CA)n Simple_repeat Simple_repeat 1 76 0 6 835 1205 282 98 20 chr17 32781695 32782104 -62490547 - MLT2B2 LTR ERVL -68 447 7 6 835 205 205 0 64 chr17 32782348 32782395 -62490256 + polypyrimidine Low_complexity Low_complexity 2 45 0 6 835 469 321 114 9 chr17 32782980 32783200 -62489451 - MLT1K LTR MaLR -15 580 338 6 835 473 258 21 0 chr17 32784249 32784346 -62488305 - PB1D10 SINE Alu -4 113 15 6 835 480 35 0 0 chr17 32785558 32785616 -62487035 + (GA)n Simple_repeat Simple_repeat 1 58 0 6 835 671 232 119 7 chr17 32785901 32786221 -62486430 - MTC LTR MaLR -15 404 18 6 835 291 234 0 25 chr17 32787824 32787903 -62484748 + GA-rich Low_complexity Low_complexity 2 78 0 6 835 187 54 26 26 chr17 32788130 32788168 -62484483 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 6 835 1414 245 103 97 chr17 32788288 32788616 -62484035 - RMER20A LTR ERVK -29 487 168 6 835 1823 91 149 10 chr17 32788616 32788905 -62483746 + ORR1A4 LTR MaLR 1 329 0 6 835 1414 245 103 97 chr17 32788905 32789050 -62483601 - RMER20A LTR ERVK -349 167 11 6 835 524 15 15 0 chr17 32789459 32789524 -62483127 + (TCCA)n Simple_repeat Simple_repeat 1 66 0 6 835 898 238 30 0 chr17 32789688 32789890 -62482761 - B3 SINE B2 -8 208 1 6 835 321 313 16 15 chr17 32790418 32790630 -62482021 + L1M4 LINE L1 5496 5709 -470 6 835 529 321 110 12 chr17 32790631 32790955 -62481696 - ORR1E LTR MaLR 0 379 1 6 835 26 50 0 0 chr17 32791515 32791555 -62481096 + AT_rich Low_complexity Low_complexity 1 40 0 6 835 300 259 11 56 chr17 32791969 32792059 -62480592 + L1_Rod LINE L1 1828 1913 -3934 6 835 23 0 0 0 chr17 32792080 32792103 -62480548 + AT_rich Low_complexity Low_complexity 1 23 0 6 835 234 235 20 0 chr17 32792103 32792154 -62480497 + B1F2 SINE Alu 1 52 -97 6 835 777 291 68 23 chr17 32792795 32793182 -62479469 - Lx8 LINE L1 0 7473 7055 6 835 21 0 0 0 chr17 32793605 32793626 -62479025 + AT_rich Low_complexity Low_complexity 1 21 0 6 835 242 264 28 0 chr17 32793676 32793748 -62478903 + (TG)n Simple_repeat Simple_repeat 1 74 0 6 835 217 0 29 29 chr17 32793785 32793819 -62478832 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 835 2004 189 133 19 chr17 32793951 32794425 -62478226 - RLTR12B LTR ERVK 0 528 1 6 835 294 317 52 0 chr17 32794767 32794913 -62477738 - MIRb SINE MIR -110 166 7 6 835 546 16 0 0 chr17 32795340 32795403 -62477248 + (CAGCC)n Simple_repeat Simple_repeat 4 66 0 6 835 396 143 0 0 chr17 32797952 32798022 -62474629 + (CA)n Simple_repeat Simple_repeat 1 70 0 6 835 431 178 0 0 chr17 32798360 32798450 -62474201 + Lx4A LINE L1 6969 7058 0 6 835 1186 299 195 22 chr17 32798484 32798572 -62474079 - MLT2B2 LTR ERVL -2 599 440 7 835 180 125 0 0 chr17 32798572 32798604 -62474047 + (TAGA)n Simple_repeat Simple_repeat 3 34 0 7 835 1186 309 56 39 chr17 32798604 32799026 -62473625 - MLT2B2 LTR ERVL -76 439 5 7 835 4079 120 114 23 chr17 32800001 32800819 -62471832 - RMER17B LTR ERVK 0 906 16 7 835 1060 182 239 22 chr17 32800785 32801097 -62471554 + RMER17B LTR ERVK 569 958 0 7 835 4833 25 0 0 chr17 32801864 32802413 -62470238 - L1Md_F2 LINE L1 -14 6568 6020 7 835 718 312 47 11 chr17 32802741 32803020 -62469631 - B4 SINE B4 -2 290 2 7 835 2049 146 42 27 chr17 32803085 32803146 -62469505 + ORR1B2 LTR MaLR 8 66 -301 7 835 1174 68 0 0 chr17 32803146 32803292 -62469359 + B1_Mus2 SINE Alu 1 146 -1 7 835 2049 146 42 27 chr17 32803292 32803567 -62469084 + ORR1B2 LTR MaLR 67 349 -18 7 835 2254 177 48 15 chr17 32803644 32804039 -62468612 + MTC LTR MaLR 1 408 -13 7 835 2251 127 16 0 chr17 32804214 32804536 -62468115 - ORR1A2 LTR MaLR 0 327 1 7 835 252 196 87 78 chr17 32805303 32805427 -62467224 - MLT1H LTR MaLR -89 459 349 7 835 496 307 68 45 chr17 32805690 32806101 -62466550 - LTR40c LTR ERVL -4 515 46 7 835 320 78 39 0 chr17 32806661 32806712 -62465939 + (TCTCCC)n Simple_repeat Simple_repeat 3 55 0 7 835 233 281 97 81 chr17 32807183 32807307 -62465344 - ORR1D1 LTR MaLR -2 372 247 7 835 543 31 0 0 chr17 32807331 32807396 -62465255 + (GA)n Simple_repeat Simple_repeat 2 66 0 7 835 201 218 36 18 chr17 32807954 32808010 -62464641 + L3 LINE CR1 751 807 -3682 7 835 512 163 21 42 chr17 32808277 32808373 -62464278 - PB1D10 SINE Alu 0 117 24 7 835 337 261 250 9 chr17 32808282 32808398 -62464253 - ID_B1 SINE B4 -1 223 80 7 835 690 245 49 0 chr17 32808522 32808665 -62463986 - B3 SINE B2 0 216 67 7 835 596 150 10 10 chr17 32809120 32809221 -62463430 + Lx4A LINE L1 6914 7014 -44 7 835 1755 162 128 6 chr17 32809229 32809418 -62463233 - ORR1C2 LTR MaLR 0 384 173 7 835 893 97 8 0 chr17 32809418 32809552 -62463099 + (GA)n Simple_repeat Simple_repeat 2 136 0 7 835 1755 162 128 6 chr17 32809552 32809698 -62462953 - ORR1C2 LTR MaLR -212 172 9 7 835 512 232 30 55 chr17 32810389 32810403 -62462248 + CYRA11_Mm Unknown Y-chromosome 158 241 -376 7 835 942 129 0 0 chr17 32810403 32810543 -62462108 - URR1B DNA MER1_type 0 225 86 7 835 180 255 0 105 chr17 32813846 32813903 -62458748 + L2 LINE L2 448 498 -2921 7 835 655 312 95 11 chr17 32814108 32814465 -62458186 + L1MB5 LINE L1 5707 6093 -81 7 835 950 214 191 22 chr17 32814695 32814860 -62457791 - ORR1D1 LTR MaLR 0 374 160 7 835 522 0 0 0 chr17 32814860 32814918 -62457733 + (CA)n Simple_repeat Simple_repeat 1 58 0 7 835 507 33 0 0 chr17 32814918 32814978 -62457673 + (GA)n Simple_repeat Simple_repeat 2 62 0 7 835 950 214 191 22 chr17 32814978 32815131 -62457520 - ORR1D1 LTR MaLR -215 159 3 7 835 5386 205 120 12 chr17 32815131 32816368 -62456283 - ORR1D1-int LTR MaLR 0 1370 1 7 835 900 136 107 0 chr17 32816368 32816537 -62456114 - ORR1D1 LTR MaLR 0 374 188 7 835 2226 193 58 33 chr17 32816650 32817170 -62455481 - MT2A LTR ERVL 0 533 1 7 835 327 355 33 0 chr17 32817178 32817299 -62455352 + RMER15 LTR ERVL 383 507 -68 7 835 306 0 0 0 chr17 32817745 32817779 -62454872 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 835 247 338 131 33 chr17 32817846 32818060 -62454591 + LTR16C LTR ERVL 150 384 -105 7 835 303 280 25 32 chr17 32818183 32818324 -62454327 - MIRc SINE MIR -76 200 60 7 835 291 121 0 0 chr17 32818324 32818382 -62454269 + (A)n Simple_repeat Simple_repeat 1 58 0 7 835 3004 154 94 0 chr17 32818822 32819353 -62453298 - RMER4B LTR ERVK 0 585 5 7 835 21 57 0 0 chr17 32819361 32819396 -62453255 + AT_rich Low_complexity Low_complexity 1 35 0 7 835 1452 190 84 89 chr17 32819969 32820282 -62452369 - ORR1D2 LTR MaLR -2 368 57 7 835 2748 131 26 28 chr17 32820282 32820744 -62451907 - RMER6B LTR ERVK 0 461 1 7 835 1452 190 84 89 chr17 32820744 32820800 -62451851 - ORR1D2 LTR MaLR -314 56 1 7 835 243 0 0 0 chr17 32820921 32820948 -62451703 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 835 411 360 54 76 chr17 32820977 32821213 -62451438 + B4 SINE B4 24 268 -24 7 835 895 296 81 29 chr17 32821580 32821924 -62450727 + Lx8 LINE L1 6932 7293 -180 7 835 23 54 0 0 chr17 32822057 32822094 -62450557 + AT_rich Low_complexity Low_complexity 1 37 0 7 835 217 186 16 33 chr17 32822324 32822385 -62450266 + C-rich Low_complexity Low_complexity 1 60 0 7 835 287 179 0 15 chr17 32822796 32822864 -62449787 + CT-rich Low_complexity Low_complexity 1 67 0 7 835 931 270 122 31 chr17 32823958 32824330 -62448321 - MTD LTR MaLR -15 404 8 7 835 372 164 0 0 chr17 32824790 32824857 -62447794 + (TA)n Simple_repeat Simple_repeat 2 68 0 7 835 251 272 31 52 chr17 32824929 32825026 -62447625 - MLT2B2 LTR ERVL -37 517 423 7 835 1936 164 83 33 chr17 32825115 32825728 -62446923 - RMER6A LTR ERVK 0 756 1 7 835 261 277 133 37 chr17 32825729 32825834 -62446817 - MLT2B2 LTR ERVL -214 301 184 7 835 880 168 133 6 chr17 32825834 32826014 -62446637 + URR1A DNA MER1_type 4 206 -20 7 835 531 291 28 39 chr17 32827378 32827560 -62445091 - MLT2B2 LTR ERVL -369 185 6 7 835 2057 120 16 22 chr17 32829714 32830037 -62442614 - ORR1A4 LTR MaLR -7 322 2 7 835 282 357 96 19 chr17 32830426 32830583 -62442068 - MLT1H LTR MaLR -282 267 99 7 835 707 243 124 25 chr17 32830640 32830914 -62441737 - RLTR11B LTR ERVK -146 307 7 7 835 249 286 82 0 chr17 32831089 32831187 -62441464 - LTR40c LTR ERVL -249 216 111 7 835 1402 35 0 0 chr17 32831457 32831628 -62441023 + L1Md_A LINE L1 6412 6582 0 7 835 1138 64 0 0 chr17 32831642 32831782 -62440869 + B1_Mus1 SINE Alu 1 140 -8 7 835 935 220 85 9 chr17 32832535 32832746 -62439905 - MTEa LTR MaLR 0 379 153 7 835 1169 271 16 184 chr17 32832715 32832880 -62439771 - MTE-int LTR MaLR -1107 473 356 7 835 891 172 14 7 chr17 32832880 32833026 -62439625 - B1_Mur4 SINE Alu -1 149 3 7 835 1018 271 15 177 chr17 32833026 32833318 -62439333 - MTE-int LTR MaLR -1225 355 108 7 835 1127 89 0 0 chr17 32833318 32833464 -62439187 - B1_Mus2 SINE Alu -1 146 1 7 835 1018 271 15 177 chr17 32833464 32833571 -62439080 - MTE-int LTR MaLR -1473 107 3 7 835 1273 252 32 6 chr17 32833604 32833920 -62438731 - MTE2b LTR MaLR -43 336 13 7 835 702 257 0 0 chr17 32835034 32835174 -62437477 + B1_Mur1 SINE Alu 5 144 -5 7 835 302 313 10 48 chr17 32835218 32835322 -62437329 - PB1D10 SINE Alu -5 112 13 7 835 813 21 0 0 chr17 32837480 32837575 -62435076 + (TA)n Simple_repeat Simple_repeat 2 96 0 7 835 305 326 92 0 chr17 32837882 32838023 -62434628 - RMER15 LTR ERVL -14 561 408 7 835 386 301 6 40 chr17 32838374 32838547 -62434104 + GA-rich Low_complexity Low_complexity 3 169 0 7 835 208 79 53 0 chr17 32840307 32840345 -62432306 + (GTTTG)n Simple_repeat Simple_repeat 2 41 0 7 835 206 245 0 0 chr17 32840409 32840462 -62432189 + T-rich Low_complexity Low_complexity 1 53 0 7 835 1264 189 95 53 chr17 32840462 32840667 -62431984 - Lx7 LINE L1 -11 7685 7468 7 835 2561 69 3 31 chr17 32840667 32841027 -62431624 + L1Md_F2 LINE L1 6233 6582 0 7 835 1264 189 95 53 chr17 32841027 32841057 -62431594 - Lx7 LINE L1 -229 7467 7428 7 835 204 67 0 0 chr17 32841057 32841087 -62431564 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 835 1264 189 95 53 chr17 32841087 32841229 -62431422 - Lx7 LINE L1 -269 7427 7292 7 835 542 218 0 0 chr17 32841233 32841343 -62431308 - Lx7 LINE L1 -355 7341 7232 7 835 276 330 92 11 chr17 32841496 32841680 -62430971 - RMER15 LTR ERVL -41 534 336 7 835 3911 115 35 70 chr17 32841794 32841947 -62430704 - RLTR19B LTR ERVK 0 715 579 7 835 3608 77 11 2 chr17 32841947 32842418 -62430233 - MT2C_Mm LTR ERVL 0 475 1 7 835 3911 115 35 70 chr17 32842418 32843005 -62429646 - RLTR19B LTR ERVK -137 578 1 7 835 3976 150 137 16 chr17 32843100 32843891 -62428760 - RLTR25B LTR ERVK 0 1103 120 7 835 504 0 0 0 chr17 32843891 32843947 -62428704 + (TA)n Simple_repeat Simple_repeat 2 57 0 7 835 3976 154 91 10 chr17 32843947 32844064 -62428587 - RLTR25B LTR ERVK -909 119 2 7 835 374 323 36 42 chr17 32844233 32844255 -62428396 + B3A SINE B2 20 36 -162 7 835 2548 160 69 144 chr17 32844255 32844921 -62427730 - RLTR18 LTR ERVK 0 616 1 7 835 374 323 36 42 chr17 32844921 32845066 -62427585 + B3A SINE B2 37 186 -12 7 835 393 39 0 0 chr17 32845392 32845443 -62427208 + (CA)n Simple_repeat Simple_repeat 1 51 0 7 835 2503 188 64 35 chr17 32846059 32846573 -62426078 - RLTR24 LTR ERV1 0 529 1 7 835 393 308 25 17 chr17 32846939 32847058 -62425593 - Lx8 LINE L1 -139 7334 7215 7 835 213 132 0 0 chr17 32848234 32848272 -62424379 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 7 835 379 337 6 63 chr17 32848281 32848455 -62424196 + RSINE1 SINE B4 2 165 0 7 835 300 170 0 0 chr17 32848487 32848540 -62424111 - B1F SINE Alu -87 62 10 7 835 259 303 96 29 chr17 32848540 32848621 -62424030 - ID_B1 SINE B4 -79 143 1 7 835 466 168 86 78 chr17 32848644 32848760 -62423891 - ID_B1 SINE B4 -4 220 104 7 835 207 0 0 0 chr17 32848829 32848852 -62423799 + (ATG)n Simple_repeat Simple_repeat 3 25 0 7 835 459 0 0 0 chr17 32849013 32849064 -62423587 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 7 835 627 108 0 0 chr17 32849072 32849165 -62423486 + (GA)n Simple_repeat Simple_repeat 2 94 0 7 835 371 314 0 0 chr17 32849165 32849270 -62423381 - PB1D10 SINE Alu -12 105 1 7 835 191 161 0 0 chr17 32849277 32849308 -62423343 - L2c LINE L2 -15 3372 3342 7 835 1813 176 70 51 chr17 32849364 32849735 -62422916 - ORR1C1 LTR MaLR 0 378 1 7 835 229 328 15 0 chr17 32850109 32850176 -62422475 + MIRm SINE MIR 209 276 0 7 835 894 252 40 29 chr17 32850185 32850463 -62422188 - RMER15 LTR ERVL 0 575 295 7 835 1678 279 89 38 chr17 32850611 32851192 -62421459 - RMER15-int LTR ERVL -3 4996 4386 7 835 340 264 112 21 chr17 32851650 32851793 -62420858 + RMER13A LTR ERVK 311 466 -394 7 835 759 223 62 11 chr17 32852117 32852294 -62420357 - Lx8 LINE L1 -448 7025 6840 7 835 1700 187 56 29 chr17 32852301 32852336 -62420315 + ORR1C2 LTR MaLR 1 34 -350 7 835 2407 171 35 7 chr17 32852336 32852742 -62419909 + MTC LTR MaLR 5 421 0 7 835 1700 187 56 29 chr17 32852742 32853080 -62419571 + ORR1C2 LTR MaLR 35 384 0 7 835 774 233 287 12 chr17 32853084 32853411 -62419240 - Lx8 LINE L1 -736 6737 6321 7 835 2132 70 31 22 chr17 32853442 32853765 -62418886 + IAPLTR4_I LTR ERVK 1 326 -1 7 835 550 113 59 66 chr17 32853775 32853903 -62418748 + IAPLTR4_I LTR ERVK 11 180 -1290 7 835 4742 95 6 0 chr17 32853902 32854535 -62418116 + IAPLTR4_I LTR ERVK 546 1182 -288 7 835 358 105 0 0 chr17 32854535 32854592 -62418059 + B1_Mus1 SINE Alu 1 57 -91 8 835 1907 71 4 0 chr17 32854597 32854836 -62417815 + IAPEY3-int LTR ERVK 2258 2497 -5183 8 835 8242 226 24 31 chr17 32854831 32856743 -62415908 + IAPLTR3-int LTR ERVK 4904 6801 -20 8 835 2077 64 30 20 chr17 32856743 32857047 -62415604 + IAPLTR2b LTR ERVK 1 307 -20 8 835 872 280 14 18 chr17 32857101 32857319 -62415332 - RMER15-int LTR ERVL -944 4055 3839 7 835 381 297 8 59 chr17 32857452 32857570 -62415081 - RMER15-int LTR ERVL -1256 3743 3632 7 835 1969 143 72 42 chr17 32857571 32857957 -62414694 + RMER4A LTR ERVK 67 464 -2 8 835 530 255 21 28 chr17 32857960 32858105 -62414546 - RMER15-int LTR ERVL -2649 2350 2207 7 835 461 319 15 15 chr17 32858382 32858519 -62414132 - ID_B1 SINE B4 -4 220 84 8 835 270 146 21 0 chr17 32858779 32858827 -62413824 + L1MC3 LINE L1 6031 6079 -1706 8 835 311 250 34 0 chr17 32858845 32858933 -62413718 - RMER15-int LTR ERVL -4218 781 691 7 835 671 112 0 9 chr17 32859068 32859176 -62413475 + (TC)n Simple_repeat Simple_repeat 2 108 0 8 835 351 0 0 0 chr17 32859176 32859215 -62413436 + (CA)n Simple_repeat Simple_repeat 1 39 0 8 835 30 0 0 0 chr17 32859589 32859619 -62413032 + AT_rich Low_complexity Low_complexity 1 30 0 8 835 2302 182 309 52 chr17 32860022 32860741 -62411910 + RMER13B LTR ERVK 1 904 -4 8 835 1166 164 40 33 chr17 32860860 32861189 -62411462 - RMER17C LTR ERVK 0 410 80 8 835 334 133 19 75 chr17 32861189 32861295 -62411356 + GA-rich Low_complexity Low_complexity 1 100 0 8 835 866 217 0 42 chr17 32861308 32861572 -62411079 - RMER17C LTR ERVK -157 253 1 8 835 203 250 0 0 chr17 32861772 32861812 -62410839 + polypyrimidine Low_complexity Low_complexity 1 40 0 8 835 564 221 33 52 chr17 32861834 32861987 -62410664 - RSINE1 SINE B4 0 165 16 8 835 325 197 0 0 chr17 32862626 32862687 -62409964 + PB1D7 SINE Alu 1 61 -59 8 835 351 337 6 63 chr17 32862720 32862894 -62409757 - RSINE1 SINE B4 0 165 2 8 835 213 132 0 0 chr17 32862903 32862941 -62409710 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 8 835 240 35 0 0 chr17 32864002 32864031 -62408620 + (CA)n Simple_repeat Simple_repeat 1 29 0 8 835 1686 26 5 0 chr17 32864210 32864402 -62408249 + B2_Mm1t SINE B2 1 193 0 8 835 2043 141 65 82 chr17 32865479 32865880 -62406771 - ORR1B1 LTR MaLR 0 394 1 8 835 939 142 0 0 chr17 32865925 32866073 -62406578 - B1_Mur4 SINE Alu 0 150 3 8 835 24 0 0 0 chr17 32866073 32866097 -62406554 + AT_rich Low_complexity Low_complexity 1 24 0 8 835 873 224 61 0 chr17 32866097 32866293 -62406358 - B3 SINE B2 -5 211 4 8 835 477 0 0 0 chr17 32866377 32866430 -62406221 + (CA)n Simple_repeat Simple_repeat 1 53 0 8 835 2108 175 17 15 chr17 32867182 32867593 -62405058 - RLTR16 LTR ERVK -93 412 1 8 835 561 99 0 0 chr17 32868889 32868970 -62403681 + (GA)n Simple_repeat Simple_repeat 2 82 0 8 835 468 296 103 30 chr17 32869037 32869308 -62403343 - RLTR9A LTR ERVK 0 368 78 8 835 1618 21 32 0 chr17 32869347 32869533 -62403118 + B2_Mm1a SINE B2 1 192 -1 8 835 180 0 0 0 chr17 32869584 32869604 -62403047 + (G)n Simple_repeat Simple_repeat 1 20 0 8 835 250 232 102 88 chr17 32869657 32869794 -62402857 - RMER16-int LTR ERVK -27 5379 5241 8 835 1142 81 0 0 chr17 32870107 32870267 -62402384 + B2_Mm1a SINE B2 1 160 -33 8 835 279 0 0 0 chr17 32870267 32870298 -62402353 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 8 835 10507 183 9 11 chr17 32870314 32872121 -62400530 - ETnERV2-int LTR ERVK -1251 6155 4351 8 835 530 276 41 0 chr17 32872150 32872295 -62400356 - ORR1D2 LTR MaLR -219 151 1 8 835 613 163 45 45 chr17 32873168 32873322 -62399329 + Lx5 LINE L1 6888 7041 -9 8 835 459 52 0 0 chr17 32873322 32873380 -62399271 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 8 835 772 177 35 7 chr17 32873673 32873815 -62398836 + B1_Mus1 SINE Alu 1 146 -2 8 835 203 79 26 0 chr17 32873815 32873853 -62398798 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 8 835 652 209 0 0 chr17 32873857 32873972 -62398679 + B1_Mus1 SINE Alu 4 118 -30 8 835 261 57 0 0 chr17 32874119 32874154 -62398497 + (T)n Simple_repeat Simple_repeat 1 35 0 8 835 718 227 0 7 chr17 32874309 32874451 -62398200 + B1_Mur2 SINE Alu 1 141 -8 8 835 234 0 0 0 chr17 32874453 32874479 -62398172 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 8 835 450 0 0 0 chr17 32874555 32874605 -62398046 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 8 835 1221 56 0 0 chr17 32874605 32874765 -62397886 - B2_Mm1a SINE B2 -33 160 1 8 835 4258 126 102 1 chr17 32874840 32875510 -62397141 - RMER19A LTR ERVK 0 737 1 8 835 1120 176 76 5 chr17 32875549 32875760 -62396891 + URR1A DNA MER1_type 1 226 0 8 835 550 330 17 50 chr17 32876016 32876255 -62396396 - B4A SINE B4 0 292 62 8 835 670 214 225 0 chr17 32876701 32876874 -62395777 + B3 SINE B2 5 216 0 8 835 280 202 157 0 chr17 32877367 32877456 -62395195 + RMER10B LTR ERVL 244 346 -52 8 835 258 32 0 0 chr17 32877466 32877497 -62395154 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 835 2653 158 50 4 chr17 32877947 32878443 -62394208 + RLTR28 LTR ERVL 5 523 -1 8 835 1121 291 66 6 chr17 32878554 32878917 -62393734 - MTD LTR MaLR -17 402 18 8 835 629 144 0 8 chr17 32878936 32879069 -62393582 + (CAAAG)n Simple_repeat Simple_repeat 3 134 0 8 835 1477 231 78 6 chr17 32879410 32879754 -62392897 + ORR1D2 LTR MaLR 2 370 0 8 835 978 173 112 15 chr17 32879987 32880192 -62392459 - URR1B DNA MER1_type 0 225 1 8 835 295 268 50 30 chr17 32880486 32880586 -62392065 + ID_B1 SINE B4 82 183 -41 8 835 195 69 0 0 chr17 32880765 32880794 -62391857 + (T)n Simple_repeat Simple_repeat 1 29 0 8 835 753 85 0 0 chr17 32880797 32880903 -62391748 - B2_Mm2 SINE B2 -88 107 2 8 835 907 264 84 29 chr17 32881361 32881705 -62390946 + Lx8 LINE L1 7102 7464 -9 8 835 310 287 0 11 chr17 32882946 32883041 -62389610 - MurSatRep1 Unknown Unknown -212 1925 1832 8 835 2380 180 32 18 chr17 32883085 32883583 -62389068 + RLTR16 LTR ERVK 1 505 0 8 835 1095 101 99 12 chr17 32883873 32884044 -62388607 + B2_Mm2 SINE B2 2 187 -8 8 835 272 336 17 0 chr17 32885746 32885865 -62386786 - MurSatRep1 Unknown Unknown -1409 728 608 8 835 1818 179 58 8 chr17 32885987 32886347 -62386304 + ORR1C1 LTR MaLR 1 378 0 8 835 189 74 0 0 chr17 32886532 32886559 -62386092 + (CAAAC)n Simple_repeat Simple_repeat 3 29 0 8 835 516 274 53 194 chr17 32886655 32886954 -62385697 + MTD LTR MaLR 1 274 -145 8 835 763 171 48 48 chr17 32887400 32887547 -62385104 + B1_Mus1 SINE Alu 2 148 0 8 835 2194 122 37 5 chr17 32887705 32888084 -62384567 + RLTR31A_Mm LTR ERVK 6 396 -188 8 835 195 42 0 0 chr17 32888144 32888168 -62384483 + (T)n Simple_repeat Simple_repeat 1 24 0 8 835 1277 27 0 0 chr17 32888168 32888315 -62384336 - B1_Mus1 SINE Alu 0 148 2 8 835 671 208 7 53 chr17 32888484 32888636 -62384015 + MTD LTR MaLR 1 145 -274 8 835 1043 249 72 8 chr17 32888693 32888944 -62383707 - ORR1D2 LTR MaLR -54 316 50 8 835 968 132 96 62 chr17 32889023 32889054 -62383597 - B2_Mm2 SINE B2 -11 184 161 8 835 234 0 0 0 chr17 32889054 32889080 -62383571 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 8 835 968 132 96 62 chr17 32889080 32889225 -62383426 - B2_Mm2 SINE B2 -35 160 2 8 835 597 64 0 0 chr17 32889252 32889330 -62383321 + (GA)n Simple_repeat Simple_repeat 1 78 0 8 835 22 0 0 0 chr17 32889615 32889637 -62383014 + GC_rich Low_complexity Low_complexity 1 22 0 8 835 1509 110 114 0 chr17 32891270 32891515 -62381136 - RLTR9A LTR ERVK -95 273 1 8 835 8659 28 8 0 chr17 32892041 32893088 -62379563 - L1Md_F3 LINE L1 0 6584 5530 8 835 552 30 0 0 chr17 32893366 32893432 -62379219 + (GGAAA)n Simple_repeat Simple_repeat 5 70 0 8 835 344 128 0 0 chr17 32893434 32893481 -62379170 - B3 SINE B2 -81 135 89 8 835 229 265 191 68 chr17 32893481 32893643 -62379008 - RLTR42 LTR ERVK 0 239 58 8 835 446 191 71 0 chr17 32893736 32893820 -62378831 - B2_Mm2 SINE B2 -104 91 2 8 835 822 211 113 11 chr17 32894135 32894312 -62378339 - B3A SINE B2 -1 197 3 8 835 429 258 15 15 chr17 32895521 32895651 -62377000 - MMERGLN-int LTR ERV1 -336 7220 7091 8 835 253 137 37 56 chr17 32895882 32895936 -62376715 - MMERGLN-int LTR ERV1 -5472 2084 2032 8 835 861 218 60 10 chr17 32896324 32896523 -62376128 + B3 SINE B2 8 216 0 8 835 510 347 94 20 chr17 32896567 32896811 -62375840 + B4 SINE B4 2 263 -29 8 835 204 40 0 0 chr17 32896834 32896859 -62375792 + (GA)n Simple_repeat Simple_repeat 2 26 0 8 835 360 280 107 80 chr17 32896891 32897111 -62375540 + L1_Mur3 LINE L1 1462 1694 -4153 8 835 261 0 0 0 chr17 32897111 32897140 -62375511 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 835 360 280 107 80 chr17 32897140 32897292 -62375359 + L1_Mur3 LINE L1 1693 1844 -4003 8 835 930 312 58 3 chr17 32897343 32897703 -62374948 + RMER15-int LTR ERVL 463 842 -4157 8 835 892 214 150 15 chr17 32897827 32898093 -62374558 - Ricksha_c DNA MuDR -297 1751 1450 8 104 13791 74 43 13 chr17 32898200 32899140 -62373511 - L1VL2 LINE L1 -627 2988 1991 8 836 1534 51 6 0 chr17 32899140 32899318 -62373333 + B2_Mm1t SINE B2 1 179 -14 8 836 13791 74 43 13 chr17 32899318 32900294 -62372357 - L1VL2 LINE L1 -1625 1990 992 8 836 1390 75 26 31 chr17 32900294 32900487 -62372164 - B2_Mm1a SINE B2 0 193 2 8 836 13791 65 64 31 chr17 32900487 32901103 -62371548 - L1VL2 LINE L1 -5331 1004 352 8 836 4939 62 39 2 chr17 32901089 32901733 -62370918 - L1_Mus2 LINE L1 -178 6388 5721 8 836 439 300 0 0 chr17 32902110 32902220 -62370431 - RSINE1 SINE B4 -53 112 3 8 836 949 249 34 19 chr17 32902346 32902612 -62370039 - RMER15 LTR ERVL -4 571 302 8 836 287 291 81 19 chr17 32902679 32902840 -62369811 + L1_Mur3 LINE L1 3236 3406 -2474 8 836 1366 270 201 45 chr17 32902843 32903833 -62368818 + Lx8 LINE L1 6312 7466 -7 8 836 836 301 119 20 chr17 32903911 32904517 -62368134 + L1MA4 LINE L1 3505 4170 -1970 8 836 277 293 12 0 chr17 32904520 32904602 -62368049 + BC1_Mm scRNA scRNA 6 88 -64 8 836 963 222 37 0 chr17 32904659 32904848 -62367803 - B3 SINE B2 -1 215 20 9 836 598 307 120 20 chr17 32905194 32905643 -62367008 + L1MA4 LINE L1 4588 5081 -1062 8 836 378 0 0 0 chr17 32905926 32905968 -62366683 + (GA)n Simple_repeat Simple_repeat 2 43 0 9 836 546 16 0 0 chr17 32906047 32906110 -62366541 + (CA)n Simple_repeat Simple_repeat 2 64 0 9 836 617 273 113 68 chr17 32906255 32906697 -62365954 + L1MA4 LINE L1 5417 5877 -423 8 836 22 56 0 0 chr17 32906912 32906948 -62365703 + AT_rich Low_complexity Low_complexity 1 36 0 9 836 305 254 0 14 chr17 32907809 32907881 -62364770 + B1_Mur1 SINE Alu 78 148 -1 9 836 1823 247 127 45 chr17 32907944 32908542 -62364109 + Lx8 LINE L1 6824 7470 -3 9 836 403 322 168 40 chr17 32908750 32908850 -62363801 + B4A SINE B4 2 103 -189 9 836 2288 142 32 3 chr17 32908850 32909197 -62363454 + RLTR15 LTR ERVK 1 357 -2 9 836 403 322 168 40 chr17 32909197 32909322 -62363329 + B4A SINE B4 104 256 -36 9 836 459 0 0 0 chr17 32909406 32909457 -62363194 + (CA)n Simple_repeat Simple_repeat 2 52 0 9 836 467 301 84 28 chr17 32909592 32909770 -62362881 + B3A SINE B2 2 189 -9 9 836 381 244 7 138 chr17 32910264 32910402 -62362249 - B3A SINE B2 -78 120 1 9 836 26 0 0 0 chr17 32910478 32910504 -62362147 + AT_rich Low_complexity Low_complexity 1 26 0 9 836 467 376 16 16 chr17 32912119 32912422 -62360229 - MurSatRep1 Unknown Unknown -88 2049 1747 9 836 283 347 17 23 chr17 32912414 32912591 -62360060 - MurSatRep1 Unknown Unknown -216 1921 1746 9 836 305 265 54 89 chr17 32913478 32913513 -62359138 + MT2B LTR ERVL 133 163 -438 9 836 497 190 62 2 chr17 32913513 32913626 -62359025 + B1_Mus2 SINE Alu 2 120 0 9 836 843 240 0 0 chr17 32914340 32914532 -62358119 - MurSatRep1 Unknown Unknown -1393 744 553 9 836 406 274 103 19 chr17 32915026 32915182 -62357469 + MTEa LTR MaLR 169 337 -42 9 836 281 189 19 0 chr17 32915186 32915239 -62357412 + B3A SINE B2 2 55 -143 9 836 1819 190 37 101 chr17 32915246 32915324 -62357327 + MTD LTR MaLR 6 78 -341 9 836 880 197 7 20 chr17 32915324 32915474 -62357177 + B1_Mur1 SINE Alu 2 149 0 9 836 1819 190 37 101 chr17 32915474 32915829 -62356822 + MTD LTR MaLR 79 411 -8 9 836 295 280 0 13 chr17 32915830 32915906 -62356745 + B3A SINE B2 76 150 -48 9 836 393 92 40 0 chr17 32915912 32915988 -62356663 + (TC)n Simple_repeat Simple_repeat 2 80 0 9 836 369 0 0 0 chr17 32915988 32916029 -62356622 + (CA)n Simple_repeat Simple_repeat 1 41 0 9 836 1503 68 10 10 chr17 32916063 32916257 -62356394 + B2_Mm2 SINE B2 2 195 0 9 836 1028 249 142 41 chr17 32916257 32916575 -62356076 + MTE2a LTR MaLR 30 379 0 9 836 374 261 232 13 chr17 32916575 32916730 -62355921 + MTE2a-int LTR MaLR 1 189 -1391 9 836 2400 267 90 66 chr17 32916723 32917333 -62355318 + MTE2a-int LTR MaLR 359 1330 -250 9 836 854 157 251 17 chr17 32917333 32917508 -62355143 + B3 SINE B2 1 216 0 9 836 2400 261 82 56 chr17 32917508 32917743 -62354908 + MTE2a-int LTR MaLR 1331 1580 0 9 836 835 269 92 121 chr17 32917742 32918080 -62354571 + MTE2a LTR MaLR 3 330 -49 9 836 314 289 29 24 chr17 32918540 32918671 -62353980 + PB1D10 SINE Alu 28 147 -1 9 836 425 306 72 32 chr17 32918693 32918818 -62353833 + RSINE1 SINE B4 4 133 -32 9 836 28 0 0 0 chr17 32918849 32918877 -62353774 + AT_rich Low_complexity Low_complexity 1 28 0 9 836 255 125 0 0 chr17 32919151 32919191 -62353460 + (TA)n Simple_repeat Simple_repeat 1 40 0 9 836 403 271 174 25 chr17 32919242 32919363 -62353288 - RSINE1 SINE B4 -24 141 3 9 836 180 77 0 0 chr17 32919452 32919478 -62353173 + (TTTTTA)n Simple_repeat Simple_repeat 4 29 0 9 836 802 263 56 5 chr17 32919771 32919966 -62352685 + B3 SINE B2 7 211 -5 9 836 3618 270 75 18 chr17 32920483 32921559 -62351092 + Lx8 LINE L1 6334 7471 -2 9 836 1448 65 11 11 chr17 32921587 32921773 -62350878 + B2_Mm1t SINE B2 2 187 -6 9 836 511 217 135 68 chr17 32921897 32922060 -62350591 + B3A SINE B2 20 193 -5 9 836 339 125 42 0 chr17 32923084 32923156 -62349495 + (TA)n Simple_repeat Simple_repeat 2 76 0 9 836 373 285 55 62 chr17 32923446 32923592 -62349059 + RSINE1 SINE B4 2 146 -19 9 836 332 43 22 0 chr17 32923597 32923643 -62349008 + (CA)n Simple_repeat Simple_repeat 2 48 0 9 836 198 0 0 0 chr17 32924032 32924054 -62348597 + (A)n Simple_repeat Simple_repeat 1 22 0 9 836 270 0 0 0 chr17 32924756 32924786 -62347865 + (CA)n Simple_repeat Simple_repeat 2 31 0 9 836 623 263 61 51 chr17 32926274 32926470 -62346181 - B3A SINE B2 0 198 1 9 836 25 0 0 0 chr17 32926508 32926533 -62346118 + AT_rich Low_complexity Low_complexity 1 25 0 9 836 1270 68 0 0 chr17 32927414 32927561 -62345090 + B1_Mm SINE Alu 1 147 0 9 836 225 0 0 0 chr17 32927561 32927586 -62345065 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 9 836 189 0 0 0 chr17 32927709 32927730 -62344921 + (CA)n Simple_repeat Simple_repeat 2 22 0 9 836 1126 155 18 0 chr17 32927888 32928113 -62344538 - MERVL_2A-int LTR ERVL -2732 3029 2710 9 836 2254 179 16 15 chr17 32928116 32928553 -62344098 - MERVL_2A-int LTR ERVL -5269 445 1 9 836 945 194 91 72 chr17 32928563 32928860 -62343791 - MT2B LTR ERVL -45 556 99 9 836 324 250 26 13 chr17 32928959 32929036 -62343615 + RMER15-int LTR ERVL 1249 1326 -3673 9 836 732 334 50 28 chr17 32929092 32929326 -62343325 + RMER15-int LTR ERVL 1428 1660 -3339 9 836 347 41 0 20 chr17 32929326 32929376 -62343275 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 9 836 732 334 50 28 chr17 32929376 32929600 -62343051 + RMER15-int LTR ERVL 1661 1896 -3103 9 836 614 221 41 0 chr17 32930394 32930516 -62342135 + B1_Mur3 SINE Alu 3 129 -20 9 836 330 335 146 8 chr17 32930672 32930925 -62341726 + RMER15 LTR ERVL 275 562 -13 9 836 958 166 7 0 chr17 32930954 32931099 -62341552 + B1_Mus1 SINE Alu 2 147 -1 9 836 354 175 0 0 chr17 32931110 32931167 -62341484 + ORR1C2 LTR MaLR 328 384 0 9 836 201 178 0 0 chr17 32931713 32931758 -62340893 + (TGAG)n Simple_repeat Simple_repeat 4 48 0 9 836 634 287 77 46 chr17 32931781 32932106 -62340545 - MT2A LTR ERVL -179 354 20 9 836 678 281 85 57 chr17 32932224 32932507 -62340144 + B4A SINE B4 1 291 -1 9 836 837 230 94 0 chr17 32933003 32933194 -62339457 + B3 SINE B2 2 210 -6 9 836 1048 237 19 0 chr17 32933333 32933544 -62339107 - B3 SINE B2 -1 215 1 9 836 722 192 6 0 chr17 32933762 32933918 -62338733 + CT-rich Low_complexity Low_complexity 1 157 0 9 836 970 153 0 68 chr17 32933945 32934106 -62338545 - B1_Mur4 SINE Alu 0 150 1 9 836 234 322 0 32 chr17 32934459 32934552 -62338099 - MurSatRep1 Unknown Unknown -236 1901 1812 9 836 263 378 42 33 chr17 32934900 32935347 -62337304 - MurSatRep1 Unknown Unknown 0 2137 1747 9 836 1475 75 5 26 chr17 32935996 32936187 -62336464 + B2_Mm2 SINE B2 2 188 -7 9 836 1871 140 68 51 chr17 32936340 32936644 -62336007 + ORR1B2 LTR MaLR 1 324 -43 9 836 1262 68 0 0 chr17 32936644 32936792 -62335859 + B1_Mus1 SINE Alu 1 148 0 9 836 1871 140 68 51 chr17 32936792 32936840 -62335811 + ORR1B2 LTR MaLR 325 359 -8 9 836 520 214 35 9 chr17 32936863 32936976 -62335675 - PB1D9 SINE Alu 0 120 5 9 836 759 228 12 0 chr17 32937513 32937675 -62334976 - U1 snRNA snRNA -1 164 1 9 836 520 263 13 7 chr17 32937747 32937900 -62334751 - MurSatRep1 Unknown Unknown -1390 747 594 9 836 1066 116 7 0 chr17 32938180 32938326 -62334325 + B1_Mus1 SINE Alu 1 147 -1 9 836 223 296 0 0 chr17 32938336 32938390 -62334261 + B3 SINE B2 23 76 -140 9 836 950 205 41 27 chr17 32938415 32938636 -62334015 + RLTR15 LTR ERVK 1 224 -135 9 836 296 147 28 56 chr17 32938648 32938720 -62333931 + RLTR15 LTR ERVK 273 342 -17 9 836 369 94 0 19 chr17 32938731 32938785 -62333866 + ORR1C2 LTR MaLR 332 384 0 9 836 354 164 8 108 chr17 32938958 32939006 -62333645 + MT2A LTR ERVL 417 463 -70 9 836 414 39 0 0 chr17 32939006 32939058 -62333593 + (TG)n Simple_repeat Simple_repeat 1 52 0 9 836 354 164 8 108 chr17 32939058 32939139 -62333512 + MT2A LTR ERVL 464 533 0 9 836 230 289 27 71 chr17 32939140 32939252 -62333399 + MTE-int LTR MaLR 60 166 -1092 9 836 334 306 69 46 chr17 32939228 32939358 -62333293 + MTE-int LTR MaLR 526 658 -922 9 836 423 305 144 22 chr17 32939348 32939529 -62333122 + MTE-int LTR MaLR 810 1012 -568 9 836 1255 48 0 14 chr17 32939602 32939750 -62332901 - B1_Mus1 SINE Alu 0 148 3 9 836 201 74 0 0 chr17 32939923 32939950 -62332701 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 9 836 4137 134 17 13 chr17 32940073 32940965 -62331686 + Lx5 LINE L1 5246 6150 -900 9 836 2972 176 24 38 chr17 32940992 32941543 -62331108 + Lx5 LINE L1 6508 7050 0 9 836 500 248 0 0 chr17 32941801 32941906 -62330745 - 5S rRNA rRNA 0 121 17 9 836 340 252 118 37 chr17 32942188 32942324 -62330327 + B1F2 SINE Alu 2 148 -1 9 836 514 148 0 19 chr17 32942400 32942503 -62330148 + GA-rich Low_complexity Low_complexity 4 104 0 9 836 219 139 0 0 chr17 32942497 32942533 -62330118 + (GAAA)n Simple_repeat Simple_repeat 1 36 0 9 836 1018 234 40 0 chr17 32942533 32942734 -62329917 + B3 SINE B2 1 209 -7 9 836 448 137 8 136 chr17 32942923 32943041 -62329610 + RMER4B LTR ERVK 1 103 -482 9 836 241 363 28 62 chr17 32943201 32943345 -62329306 - RMER4A LTR ERVK -303 163 25 9 836 360 257 69 0 chr17 32943435 32943536 -62329115 + B3A SINE B2 91 198 0 9 836 1326 79 16 48 chr17 32943784 32943971 -62328680 + B2_Mm2 SINE B2 1 181 -14 9 836 332 299 31 23 chr17 32944014 32944144 -62328507 + RSINE1 SINE B4 21 151 -14 9 836 761 156 48 34 chr17 32944178 32944324 -62328327 + B1_Mur3 SINE Alu 1 148 -1 9 836 1056 255 143 22 chr17 32945235 32945592 -62327059 + MTD LTR MaLR 5 404 -15 9 836 261 140 0 0 chr17 32945663 32945720 -62326931 + (G)n Simple_repeat Simple_repeat 1 57 0 9 836 320 80 9 83 chr17 32947293 32947402 -62325249 + GA-rich Low_complexity Low_complexity 2 102 0 9 836 1208 239 74 74 chr17 32949077 32949551 -62323100 - RMER5 LTR ERV1 -9 525 52 9 836 678 213 22 0 chr17 32949607 32949743 -62322908 - B1_Mur1 SINE Alu -8 141 3 9 836 25 95 0 0 chr17 32949756 32949830 -62322821 + AT_rich Low_complexity Low_complexity 1 74 0 9 836 1777 163 96 16 chr17 32949901 32950287 -62322364 + RMER10A LTR ERVL 1 417 -25 9 836 1425 67 5 30 chr17 32950313 32950512 -62322139 - B2_Mm2 SINE B2 0 195 2 9 836 351 0 0 0 chr17 32950529 32950568 -62322083 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 836 685 260 40 0 chr17 32950574 32950751 -62321900 - B3 SINE B2 -8 208 25 9 836 798 89 0 0 chr17 32950755 32950867 -62321784 + (TTCC)n Simple_repeat Simple_repeat 4 115 0 9 836 392 223 0 88 chr17 32951540 32951653 -62320998 + MT2B LTR ERVL 155 257 -344 1 836 960 48 0 0 chr17 32951573 32951698 -62320953 + B1_Mus2 SINE Alu 23 147 0 1 836 282 29 0 0 chr17 32951743 32951778 -62320873 + (CAAAG)n Simple_repeat Simple_repeat 2 36 0 1 836 237 288 154 29 chr17 32952107 32952243 -62320408 + RSINE1 SINE B4 3 155 -10 1 836 641 144 62 83 chr17 32952393 32952537 -62320114 - B1_Mur1 SINE Alu -6 143 3 1 836 389 70 18 0 chr17 32952915 32952972 -62319679 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 836 428 51 0 17 chr17 32954087 32954147 -62318504 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 836 305 258 65 79 chr17 32954921 32955060 -62317591 + B3A SINE B2 42 178 -20 1 836 1358 66 33 11 chr17 32955150 32955333 -62317318 + B2_Mm2 SINE B2 1 187 -8 1 836 681 206 50 0 chr17 32955334 32955475 -62317176 + B1_Mur4 SINE Alu 2 149 -1 1 836 292 292 25 42 chr17 32955502 32955620 -62317031 + PB1D10 SINE Alu 2 117 0 1 836 1247 41 0 0 chr17 32955711 32955858 -62316793 + B1_Mus2 SINE Alu 1 147 0 1 836 543 232 24 0 chr17 32956070 32956195 -62316456 - B1_Mur1 SINE Alu -20 129 2 1 836 247 262 22 77 chr17 32956115 32956206 -62316445 - MT2B LTR ERVL -362 239 154 1 836 352 336 54 34 chr17 32956418 32957011 -62315640 - MurSatRep1 Unknown Unknown -85 2052 1744 1 836 311 266 22 52 chr17 32956963 32957098 -62315553 - MMSAT4 Satellite Satellite 0 168 38 1 836 240 396 40 20 chr17 32957126 32957422 -62315229 - MurSatRep1 Unknown Unknown -88 2049 1748 1 836 373 347 25 20 chr17 32957456 32957653 -62314998 - MurSatRep1 Unknown Unknown -88 2049 1852 1 836 229 292 0 0 chr17 32958715 32958804 -62313847 - MurSatRep1 Unknown Unknown -1124 1013 925 1 836 237 139 0 0 chr17 32958823 32958866 -62313785 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 836 788 255 24 16 chr17 32958966 32959213 -62313438 - MurSatRep1 Unknown Unknown -1345 792 544 1 836 685 161 108 0 chr17 32959845 32959975 -62312676 + B1_Mur1 SINE Alu 1 144 -5 1 836 207 167 0 0 chr17 32959984 32960020 -62312631 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 1 836 516 211 201 13 chr17 32960356 32960510 -62312141 + B3A SINE B2 16 198 0 1 836 712 192 16 0 chr17 32961138 32961263 -62311388 + B1_Mur2 SINE Alu 5 131 -18 1 836 305 276 41 31 chr17 32961340 32961437 -62311214 + RSINE1 SINE B4 24 121 -44 1 836 1046 103 7 14 chr17 32961461 32961609 -62311042 - B1_Mur4 SINE Alu -3 147 1 1 836 556 225 126 55 chr17 32962076 32962259 -62310392 + B3A SINE B2 3 198 0 1 836 192 234 21 11 chr17 32962303 32962398 -62310253 + (CATA)n Simple_repeat Simple_repeat 4 99 0 1 836 699 200 20 52 chr17 32962700 32962853 -62309798 + B1_Mur2 SINE Alu 2 149 0 1 836 1162 57 13 0 chr17 32962878 32963037 -62309614 + (GAGAA)n Simple_repeat Simple_repeat 4 164 0 1 836 291 326 137 15 chr17 32963041 32963172 -62309479 + B3A SINE B2 52 198 0 1 836 1011 62 56 0 chr17 32963197 32963341 -62309310 + B2_Mm2 SINE B2 36 187 -8 1 836 765 168 14 21 chr17 32963680 32963820 -62308831 - B1_Mur3 SINE Alu -9 140 2 1 836 807 211 40 0 chr17 32963837 32964012 -62308639 + MTD LTR MaLR 101 282 -137 1 836 352 309 94 0 chr17 32964214 32964363 -62308288 + RSINE1 SINE B4 3 165 0 1 836 401 153 39 13 chr17 32964418 32964511 -62308140 - B1_Mur1 SINE Alu -3 146 41 1 836 5358 49 0 24 chr17 32964539 32965213 -62307438 - L1_Mus1 LINE L1 0 6567 5910 1 836 324 0 0 0 chr17 32966662 32966698 -62305953 + (T)n Simple_repeat Simple_repeat 1 36 0 1 836 726 208 64 78 chr17 32967498 32967717 -62304934 + B3 SINE B2 1 216 0 1 836 894 303 68 18 chr17 32967811 32968137 -62304514 - Lx7 LINE L1 -391 7305 6964 1 836 16473 143 22 18 chr17 32968195 32971113 -62301538 + L1_Mm LINE L1 1807 4735 -1148 1 836 552 31 8 8 chr17 32971123 32971214 -62301437 + B1_Mus2 SINE Alu 1 91 -36 1 836 6625 63 1 0 chr17 32971214 32972028 -62300623 + L1_Mus1 LINE L1 5679 6493 -74 1 836 944 251 118 29 chr17 32972028 32972105 -62300546 - RMER17B LTR ERVK -578 380 306 1 836 750 78 0 0 chr17 32972105 32972207 -62300444 + (GA)n Simple_repeat Simple_repeat 1 102 0 1 836 944 251 118 29 chr17 32972207 32972478 -62300173 - RMER17B LTR ERVK -653 305 1 1 836 410 297 78 28 chr17 32972650 32972830 -62299821 - ORR1D1 LTR MaLR -185 189 1 1 836 1880 262 76 38 chr17 32972836 32973443 -62299208 - Lx7 LINE L1 -741 6955 6326 1 836 414 302 114 78 chr17 32973853 32974071 -62298580 - Lx7 LINE L1 -1365 6331 6126 1 836 1747 21 0 0 chr17 32974071 32974264 -62298387 + B2_Mm1a SINE B2 1 193 0 1 836 414 302 114 78 chr17 32974264 32974404 -62298247 - Lx7 LINE L1 -1571 6125 5960 1 836 293 250 40 40 chr17 32974580 32974680 -62297971 - RSINE1 SINE B4 -64 101 2 1 836 549 306 75 16 chr17 32974701 32974723 -62297928 - B3A SINE B2 0 198 179 1 836 479 17 17 0 chr17 32974723 32974783 -62297868 + (TG)n Simple_repeat Simple_repeat 1 61 0 1 836 549 306 75 16 chr17 32974783 32974946 -62297705 - B3A SINE B2 -20 178 2 1 836 714 24 0 0 chr17 32974964 32975048 -62297603 + (TC)n Simple_repeat Simple_repeat 1 84 0 1 836 252 0 0 0 chr17 32975048 32975075 -62297576 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 836 385 167 28 0 chr17 32975404 32975476 -62297175 - B3A SINE B2 -123 75 2 1 836 486 266 184 5 chr17 32975733 32975918 -62296733 - MTD LTR MaLR -196 223 6 1 836 211 128 51 0 chr17 32976222 32976261 -62296390 + G-rich Low_complexity Low_complexity 4 44 0 1 836 1622 149 29 124 chr17 32976861 32976978 -62295673 + RMER17C LTR ERVK 1 111 -299 1 836 1231 41 0 0 chr17 32976978 32977123 -62295528 - B1_Mus2 SINE Alu -2 145 1 1 836 1622 149 29 124 chr17 32977123 32977458 -62295193 + RMER17C LTR ERVK 112 410 0 1 836 266 79 47 16 chr17 32977508 32977572 -62295079 + (TTTTTG)n Simple_repeat Simple_repeat 2 67 0 1 836 614 229 17 0 chr17 32977581 32977699 -62294952 + B1_Mus2 SINE Alu 3 122 -25 1 836 21 0 0 0 chr17 32978805 32978826 -62293825 + AT_rich Low_complexity Low_complexity 1 21 0 1 836 524 238 227 0 chr17 32979213 32979385 -62293266 + B3 SINE B2 1 211 -5 1 836 462 307 95 30 chr17 32979727 32979895 -62292756 + B3A SINE B2 2 180 -18 1 836 195 100 0 0 chr17 32980082 32980112 -62292539 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 836 357 82 0 0 chr17 32980125 32980174 -62292477 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 1 836 1223 62 0 0 chr17 32980174 32980335 -62292316 - B2_Mm2 SINE B2 -33 162 2 1 836 525 171 160 15 chr17 32980338 32980469 -62292182 - B1_Mur4 SINE Alu 0 150 1 1 836 979 173 14 42 chr17 32980577 32980794 -62291857 - RMER19B LTR ERVK 0 902 692 1 836 285 238 12 24 chr17 32980796 32980878 -62291773 - RMER19B LTR ERVK -340 271 191 1 836 1185 246 81 50 chr17 32980889 32981270 -62291381 - Lx8 LINE L1 -257 7216 6824 1 836 350 177 12 48 chr17 32981310 32981393 -62291258 - B1_Mur1 SINE Alu -3 146 67 1 836 427 317 14 7 chr17 32981828 32981974 -62290677 + RSINE1 SINE B4 2 148 -17 1 836 549 300 57 31 chr17 32982157 32982353 -62290298 - B3A SINE B2 -5 211 8 1 836 570 217 32 24 chr17 32982769 32982892 -62289759 + RSINE1 SINE B4 2 125 -40 1 836 471 35 0 0 chr17 32982906 32982963 -62289688 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 836 473 224 35 0 chr17 32983127 32983243 -62289408 - RMER19A LTR ERVK -156 581 462 1 836 926 178 207 9 chr17 32983707 32983934 -62288717 + ORR1B2 LTR MaLR 3 274 -93 1 836 1346 171 40 109 chr17 32983936 32984262 -62288389 - ORR1B1 LTR MaLR -69 325 23 1 836 5827 99 17 47 chr17 32984262 32985196 -62287455 - RMER17A2 LTR ERVK 0 906 1 1 836 1346 171 40 109 chr17 32985196 32985217 -62287434 - ORR1B1 LTR MaLR -372 22 2 1 836 541 130 0 11 chr17 32985218 32985311 -62287340 + ORR1B2 LTR MaLR 295 386 -8 1 836 206 236 0 0 chr17 32985341 32985396 -62287255 + T-rich Low_complexity Low_complexity 1 55 0 1 836 910 185 280 0 chr17 32985915 32986206 -62286445 + RLTR14 LTR ERV1 11 382 0 1 836 205 283 0 0 chr17 32986264 32986324 -62286327 + T-rich Low_complexity Low_complexity 1 60 0 1 836 900 173 0 24 chr17 32987046 32987212 -62285439 - RLTR14 LTR ERV1 0 382 221 1 836 357 162 0 14 chr17 32987217 32987286 -62285365 + RMER1C Other Other 1157 1224 -118 1 836 547 187 80 16 chr17 32987303 32987428 -62285223 + RMER1C Other Other 1201 1333 -9 1 836 1107 171 45 0 chr17 32987431 32987653 -62284998 - RLTR14 LTR ERV1 -143 239 8 1 836 514 215 68 23 chr17 32987730 32987863 -62284788 - B1_Mur1 SINE Alu -2 147 9 1 836 550 178 163 0 chr17 32987998 32988127 -62284524 - B1_Mur4 SINE Alu 0 150 1 1 836 2250 141 21 0 chr17 32990274 32990657 -62281994 - L1_Mur2 LINE L1 -678 5199 4809 1 836 811 136 0 0 chr17 32990658 32990783 -62281868 + B3 SINE B2 6 130 -86 1 836 439 230 85 31 chr17 32990854 32990984 -62281667 - B3A SINE B2 -57 141 5 1 836 960 297 11 22 chr17 32991408 32991680 -62280971 - Lx8 LINE L1 -90 7383 7115 1 836 1135 62 6 0 chr17 32991718 32991878 -62280773 + B2_Mm2 SINE B2 1 161 -34 1 836 276 100 0 0 chr17 32991878 32991918 -62280733 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 1 836 710 270 268 45 chr17 32991918 32992376 -62280275 - Lx8 LINE L1 -405 7068 6509 1 836 371 277 30 83 chr17 32992381 32992550 -62280101 - Lx8 LINE L1 -1101 6372 6213 1 836 1347 100 16 0 chr17 32992641 32992831 -62279820 + B2_Mm1t SINE B2 1 193 0 1 836 335 245 41 41 chr17 32992936 32993034 -62279617 + RMER12 LTR ERVK 1225 1322 0 1 836 50 31 0 0 chr17 32993046 32993110 -62279541 + AT_rich Low_complexity Low_complexity 1 64 0 1 836 978 292 95 3 chr17 32993223 32993591 -62279060 + MTD LTR MaLR 18 419 0 1 836 669 243 88 15 chr17 32994513 32994776 -62277875 + MurSatRep1 Unknown Unknown 575 856 -1281 1 836 9324 104 33 2 chr17 32994832 32996997 -62275654 - L1_Mus3 LINE L1 -7 6631 4403 1 836 12671 135 14 7 chr17 32996998 32999060 -62273591 + L1_Mus3 LINE L1 2328 4404 -1479 1 836 1042 256 73 12 chr17 32999432 32999760 -62272891 - MTD LTR MaLR -71 348 1 1 836 435 269 112 26 chr17 32999760 32999993 -62272658 - MTD-int LTR MaLR 0 1258 1006 1 836 839 271 100 31 chr17 33000000 33000289 -62272362 - MTC-int LTR MaLR -252 1006 698 1 836 1478 232 21 59 chr17 33000296 33000671 -62271980 - MTD LTR MaLR -58 361 1 2 836 364 291 117 9 chr17 33000699 33000810 -62271841 + B4A SINE B4 1 123 -169 3 836 816 203 0 0 chr17 33001093 33001236 -62271415 + B1_Mur4 SINE Alu 7 149 -1 4 836 372 354 21 29 chr17 33001978 33002257 -62270394 + MurSatRep1 Unknown Unknown 1732 2008 -129 5 836 271 350 19 63 chr17 33002591 33002798 -62269853 + MurSatRep1 Unknown Unknown 1750 1947 -190 6 836 286 193 0 34 chr17 33003561 33003620 -62269031 - Lx7 LINE L1 -465 7231 7175 7 836 474 275 21 14 chr17 33003644 33003784 -62268867 + B1_Mm SINE Alu 1 141 -6 8 836 476 266 40 16 chr17 33003789 33003915 -62268736 - B3A SINE B2 -2 196 68 9 836 285 268 69 11 chr17 33003897 33003984 -62268667 + PB1D9 SINE Alu 29 120 0 1 836 1183 286 86 3 chr17 33004681 33005052 -62267599 - MTD LTR MaLR 0 419 18 1 836 487 288 0 76 chr17 33005264 33005422 -62267229 + Lx8 LINE L1 6227 6372 -1101 1 836 1598 301 88 25 chr17 33005419 33006070 -62266581 + Lx8 LINE L1 6500 7191 -282 1 836 226 210 85 12 chr17 33006181 33006263 -62266388 + Lx8 LINE L1 7385 7472 -1 1 836 204 204 0 0 chr17 33006277 33006292 -62266359 + (TTAA)n Simple_repeat Simple_repeat 2 16 0 1 836 818 147 52 0 chr17 33006292 33006428 -62266223 + B1_Mur4 SINE Alu 1 143 -7 1 836 204 204 0 0 chr17 33006428 33006461 -62266190 + (TTAA)n Simple_repeat Simple_repeat 1 33 0 1 836 479 248 136 9 chr17 33006783 33006917 -62265734 + B3A SINE B2 4 144 -49 1 836 715 202 45 65 chr17 33007146 33007347 -62265304 - B3A SINE B2 0 198 2 1 836 774 32 0 0 chr17 33008028 33008121 -62264530 + (TTCTC)n Simple_repeat Simple_repeat 3 95 0 1 836 729 63 0 0 chr17 33008235 33008330 -62264321 + (TTCTC)n Simple_repeat Simple_repeat 1 95 0 1 836 484 176 0 0 chr17 33008330 33008404 -62264247 + polypyrimidine Low_complexity Low_complexity 6 79 0 2 836 1031 86 0 7 chr17 33008404 33008544 -62264107 - B1_Mus1 SINE Alu 0 148 10 2 836 1853 103 110 181 chr17 33008544 33008880 -62263771 + RLTR23 LTR ERV1 1 309 -121 2 836 279 0 0 0 chr17 33008880 33008911 -62263740 + (CG)n Simple_repeat Simple_repeat 1 31 0 2 836 378 0 0 0 chr17 33008911 33008952 -62263699 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 836 1853 103 110 181 chr17 33008952 33009077 -62263574 + RLTR23 LTR ERV1 310 429 -1 2 836 327 241 24 0 chr17 33009192 33009275 -62263376 + RLTR19-int LTR ERVK 4124 4208 -1929 2 836 1975 158 107 18 chr17 33009282 33009675 -62262976 + RLTR23 LTR ERV1 1 428 -2 2 836 180 205 85 49 chr17 33009753 33009835 -62262816 + L2 LINE L2 1739 1823 -1596 2 836 1934 120 159 12 chr17 33010055 33010401 -62262250 + RMER10B LTR ERVL 2 398 0 2 836 602 215 13 34 chr17 33010434 33010583 -62262068 + B1_Mur1 SINE Alu 2 147 -2 2 836 453 266 36 7 chr17 33010601 33010741 -62261910 + B1_Mus2 SINE Alu 2 145 -2 3 836 1694 196 110 79 chr17 33011194 33011437 -62261214 - RLTR33 LTR ERVK 0 678 437 3 836 551 74 0 12 chr17 33011437 33011519 -62261132 + (TTTA)n Simple_repeat Simple_repeat 3 83 0 3 836 1694 196 110 79 chr17 33011519 33011675 -62260976 - RLTR33 LTR ERVK -242 436 274 3 836 1246 78 0 11 chr17 33011675 33011857 -62260794 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 836 1694 196 110 79 chr17 33011857 33011910 -62260741 - RLTR33 LTR ERVK -405 273 200 3 836 1215 105 15 35 chr17 33011910 33012107 -62260544 - B2_Mm2 SINE B2 0 195 3 3 836 1694 196 110 79 chr17 33012107 33012207 -62260444 - RLTR33 LTR ERVK -479 199 108 3 836 993 203 50 54 chr17 33012209 33012526 -62260125 + RMER17C LTR ERVK 95 410 0 3 836 846 154 107 0 chr17 33012554 33012723 -62259928 + B2_Mm2 SINE B2 1 187 -8 3 836 1493 70 5 0 chr17 33012727 33012914 -62259737 + B2_Mm1a SINE B2 1 188 -5 3 836 505 196 354 32 chr17 33012924 33013082 -62259569 + B3 SINE B2 2 210 -6 3 836 515 164 135 0 chr17 33013120 33013224 -62259427 - RLTR33 LTR ERVK -560 118 1 3 836 763 164 44 22 chr17 33013738 33013875 -62258776 + B1_Mus2 SINE Alu 1 140 -7 3 836 469 269 95 6 chr17 33015341 33015509 -62257142 + RLTR41 LTR ERV1 264 446 0 4 836 1779 116 117 133 chr17 33015638 33016075 -62256576 - RLTR23 LTR ERV1 0 430 1 4 836 1533 62 0 25 chr17 33016357 33016554 -62256097 + B2_Mm1a SINE B2 2 193 0 4 836 470 229 83 0 chr17 33016567 33016676 -62255975 + B3A SINE B2 1 118 -80 4 836 716 164 230 6 chr17 33016681 33016859 -62255792 - URR1B DNA MER1_type -1 224 7 4 836 25 31 0 0 chr17 33016967 33016999 -62255652 + AT_rich Low_complexity Low_complexity 1 32 0 4 836 2182 160 40 10 chr17 33017165 33017570 -62255081 + MTC LTR MaLR 1 417 -4 4 836 229 198 0 72 chr17 33017988 33018052 -62254599 + B1F SINE Alu 43 101 -19 4 836 891 240 24 10 chr17 33018085 33018291 -62254360 + B3 SINE B2 5 213 -3 4 836 1583 172 75 78 chr17 33018891 33019276 -62253375 - ORR1C2 LTR MaLR 0 384 1 4 836 1400 40 35 6 chr17 33021471 33021645 -62251006 + B2_Mm2 SINE B2 1 179 -16 5 836 384 253 112 53 chr17 33021645 33021833 -62250818 + MTD-int LTR MaLR 973 1171 -87 5 836 805 252 199 15 chr17 33021920 33022213 -62250438 + MTD LTR MaLR 3 363 -56 5 836 1235 41 0 0 chr17 33022213 33022360 -62250291 + B1_Mus1 SINE Alu 2 148 0 5 836 589 297 88 72 chr17 33022360 33022463 -62250188 + MTD LTR MaLR 315 421 0 5 836 702 239 12 0 chr17 33022897 33023064 -62249587 - MurSatRep1 Unknown Unknown -1394 743 575 5 836 233 302 256 16 chr17 33023676 33023797 -62248854 - RSINE1 SINE B4 -13 152 3 5 836 1490 69 11 0 chr17 33023888 33024077 -62248574 + B2_Mm2 SINE B2 2 192 -3 5 836 771 286 99 11 chr17 33024156 33024428 -62248223 - MTD LTR MaLR -15 404 109 5 836 1356 77 44 0 chr17 33024430 33024613 -62248038 + B2_Mm2 SINE B2 1 191 -4 5 836 264 167 0 0 chr17 33024642 33024690 -62247961 + GA-rich Low_complexity Low_complexity 1 48 0 5 836 755 177 28 21 chr17 33024921 33025065 -62247586 + B1_Mur4 SINE Alu 5 149 -1 5 836 346 227 176 29 chr17 33025128 33025264 -62247387 + Lx8 LINE L1 6213 6368 -1105 6 836 180 0 0 0 chr17 33025288 33025308 -62247343 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 6 836 416 310 98 0 chr17 33025851 33026035 -62246616 + B3 SINE B2 4 205 -11 6 836 435 38 0 0 chr17 33026125 33026178 -62246473 + (GA)n Simple_repeat Simple_repeat 2 54 0 6 836 1595 38 16 0 chr17 33026211 33026397 -62246254 + B2_Mm2 SINE B2 3 191 -4 6 836 2087 149 0 15 chr17 33026400 33026728 -62245923 + Lx LINE L1 5945 6267 -387 6 836 387 0 0 0 chr17 33027070 33027113 -62245538 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 836 341 253 40 0 chr17 33027610 33027685 -62244966 + B1_Mur3 SINE Alu 3 80 -69 6 836 759 159 179 0 chr17 33027694 33027839 -62244812 + URR1A DNA MER1_type 56 226 0 6 836 318 219 53 123 chr17 33027839 33027881 -62244770 - CYRA11_Mm Unknown Y-chromosome -277 340 167 6 836 1158 61 0 39 chr17 33029043 33029196 -62243455 + B1_Mus1 SINE Alu 1 147 -1 7 836 320 59 43 14 chr17 33029247 33029316 -62243335 + (CAAAAA)n Simple_repeat Simple_repeat 2 72 0 7 836 1888 128 5 116 chr17 33029479 33029849 -62242802 - ORR1A4 LTR MaLR 0 329 1 7 836 441 0 0 0 chr17 33029869 33029918 -62242733 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 104 957 235 29 67 chr17 33029923 33030199 -62242452 - MT2B LTR ERVL -70 531 281 7 837 319 197 0 53 chr17 33030202 33030277 -62242374 - RMER6C LTR ERVK -535 155 85 7 837 1452 55 0 11 chr17 33030651 33030834 -62241817 + B2_Mm2 SINE B2 1 181 -14 7 837 23 33 0 0 chr17 33030834 33030864 -62241787 + AT_rich Low_complexity Low_complexity 1 30 0 7 837 589 74 0 0 chr17 33030864 33030945 -62241706 - B1_Mm SINE Alu 0 147 67 7 837 263 326 10 82 chr17 33030989 33031086 -62241565 - B1_Mur3 SINE Alu -13 136 47 7 837 31 44 0 0 chr17 33031097 33031142 -62241509 + AT_rich Low_complexity Low_complexity 1 45 0 8 837 510 169 0 35 chr17 33031183 33031269 -62241382 + B1_Mur2 SINE Alu 61 143 -6 8 837 240 111 0 0 chr17 33031276 33031312 -62241339 + (A)n Simple_repeat Simple_repeat 1 36 0 8 837 1897 204 47 3 chr17 33031379 33031738 -62240913 + RLTR14 LTR ERV1 8 382 0 8 837 2664 94 159 0 chr17 33032237 33032696 -62239955 - RLTR47_MM LTR ERV1 0 532 1 8 837 873 48 181 24 chr17 33032919 33033046 -62239605 + B1_Mus1 SINE Alu 1 147 -1 8 837 1629 253 70 127 chr17 33033351 33034351 -62238300 + RMER17B LTR ERVK 1 943 -15 8 837 647 135 0 0 chr17 33034350 33034446 -62238205 + B1_Mus2 SINE Alu 52 147 0 8 837 402 184 0 0 chr17 33034864 33034940 -62237711 + RLTR19C LTR ERVK 19 94 -412 8 837 447 290 7 82 chr17 33035017 33035152 -62237499 + RLTR33 LTR ERVK 469 593 -85 8 837 1276 81 23 0 chr17 33035666 33035840 -62236811 + B2_Mm2 SINE B2 2 179 -16 9 837 189 0 0 0 chr17 33035840 33035861 -62236790 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 9 837 291 102 18 7 chr17 33035891 33035947 -62236704 + B2_Mm2 SINE B2 55 109 -107 9 837 288 77 0 0 chr17 33035962 33036001 -62236650 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 9 837 902 104 96 7 chr17 33036433 33036568 -62236083 + B1_Mus2 SINE Alu 1 147 0 9 837 431 191 93 28 chr17 33036917 33037025 -62235626 - B1_Mus1 SINE Alu 0 148 34 9 837 461 136 25 0 chr17 33037309 33037390 -62235261 - PB1D9 SINE Alu 0 120 38 9 837 36 0 0 0 chr17 33037395 33037431 -62235220 + AT_rich Low_complexity Low_complexity 1 36 0 9 837 5582 41 0 0 chr17 33037438 33038112 -62234539 - L1Md_T LINE L1 0 6582 5929 9 837 193 53 25 50 chr17 33038112 33038131 -62234520 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 9 837 463 155 28 39 chr17 33038769 33038887 -62233764 - B1_Mur2 SINE Alu -1 149 45 1 837 255 281 41 111 chr17 33038818 33038990 -62233661 - RLTR25A LTR ERVK -521 582 423 1 837 214 51 77 0 chr17 33039002 33039041 -62233610 + (TGGGGG)n Simple_repeat Simple_repeat 1 42 0 1 837 2045 133 0 104 chr17 33039198 33039593 -62233058 + ORR1B1 LTR MaLR 41 394 0 1 837 980 269 21 28 chr17 33039632 33039957 -62232694 - RLTR15 LTR ERVK -36 323 1 1 837 494 306 84 27 chr17 33039959 33040298 -62232353 - L1M4 LINE L1 -466 5708 5352 1 837 658 235 153 0 chr17 33040366 33040549 -62232102 + B3 SINE B2 3 213 -3 1 837 818 154 29 0 chr17 33040814 33040950 -62231701 - B1_Mus1 SINE Alu -7 141 2 1 837 25 0 0 0 chr17 33041395 33041420 -62231231 + AT_rich Low_complexity Low_complexity 1 25 0 1 837 508 324 28 23 chr17 33041503 33041680 -62230971 - B3A SINE B2 -18 180 3 1 837 239 316 66 0 chr17 33041732 33041808 -62230843 - ID4 SINE ID -2 81 1 1 837 1134 23 0 0 chr17 33043838 33043971 -62228680 + (CTATT)n Simple_repeat Simple_repeat 2 134 0 1 837 436 212 190 25 chr17 33043971 33044084 -62228567 - B1_Mm SINE Alu -11 136 1 1 837 533 193 109 0 chr17 33044113 33044232 -62228419 - B3A SINE B2 -66 132 1 1 837 1068 52 147 13 chr17 33045391 33045547 -62227104 + B2_Mm2 SINE B2 1 177 -18 1 837 240 111 0 0 chr17 33045547 33045583 -62227068 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 1 837 228 258 16 16 chr17 33045662 33045725 -62226926 + CT-rich Low_complexity Low_complexity 2 64 0 1 837 1230 54 0 0 chr17 33046563 33046710 -62225941 + B1_Mus1 SINE Alu 2 148 0 1 837 480 18 0 0 chr17 33046937 33046994 -62225657 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 837 693 241 0 35 chr17 33047000 33047142 -62225509 - B1_Mus2 SINE Alu -9 138 2 1 837 1193 13 26 0 chr17 33047145 33047300 -62225351 + (TAGA)n Simple_repeat Simple_repeat 4 162 0 1 837 321 172 52 0 chr17 33047300 33047358 -62225293 + B1F1 SINE Alu 79 139 -10 1 837 395 270 194 36 chr17 33047366 33047531 -62225120 - B3 SINE B2 0 216 26 1 837 1350 227 121 3 chr17 33049178 33049501 -62223150 + ORR1D2 LTR MaLR 1 361 -9 1 837 232 337 95 12 chr17 33049503 33049587 -62223064 + B1F SINE Alu 7 97 -52 1 837 337 289 202 70 chr17 33050175 33050432 -62222219 + B4A SINE B4 2 292 0 1 837 789 176 9 13 chr17 33051180 33051405 -62221246 + GA-rich Low_complexity Low_complexity 1 223 0 1 837 1036 269 88 73 chr17 33051656 33052142 -62220509 + MLT2B2 LTR ERVL 1 515 -40 1 837 543 16 0 0 chr17 33052511 33052575 -62220076 + (TG)n Simple_repeat Simple_repeat 2 65 0 1 837 522 46 0 0 chr17 33054932 33054997 -62217654 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 837 675 227 35 7 chr17 33055004 33055146 -62217505 - B3A SINE B2 -48 150 5 1 837 561 30 0 0 chr17 33055147 33055214 -62217437 + (TTCC)n Simple_repeat Simple_repeat 2 68 0 1 837 816 173 14 7 chr17 33055236 33055376 -62217275 - B1_Mur3 SINE Alu 0 149 9 1 837 311 281 37 37 chr17 33055469 33055576 -62217075 - PB1D10 SINE Alu -8 109 3 1 837 652 286 18 6 chr17 33055576 33055657 -62216994 - ID SINE ID -139 85 3 1 837 219 242 0 29 chr17 33055739 33055807 -62216844 + GA-rich Low_complexity Low_complexity 1 66 0 1 837 486 0 0 0 chr17 33055817 33055871 -62216780 + (GGA)n Simple_repeat Simple_repeat 1 54 0 1 837 519 344 105 28 chr17 33057045 33057434 -62215217 + MT2A LTR ERVL 1 419 -114 1 837 727 278 7 77 chr17 33058088 33058314 -62214337 + L1M5 LINE L1 4431 4638 -1508 1 837 458 270 9 0 chr17 33058314 33058425 -62214226 - PB1D9 SINE Alu -8 112 1 1 837 727 296 27 70 chr17 33058425 33058538 -62214113 + L1M5 LINE L1 4639 4762 -1384 1 837 2110 227 47 24 chr17 33058561 33059067 -62213584 + RLTR11A2 LTR ERVK 7 524 -3 1 837 575 269 109 6 chr17 33059068 33059251 -62213400 + B3 SINE B2 12 213 -3 1 837 773 231 0 0 chr17 33059251 33059394 -62213257 - B1_Mur3 SINE Alu -5 144 2 1 837 966 196 26 17 chr17 33059396 33059629 -62213022 + Lx9 LINE L1 7401 7635 -9 1 837 536 281 22 22 chr17 33059934 33060072 -62212579 + RSINE1 SINE B4 2 139 -26 1 837 605 195 61 30 chr17 33060129 33060261 -62212390 + B1_Mur1 SINE Alu 5 140 -9 1 837 290 206 65 52 chr17 33060422 33060499 -62212152 + ID4 SINE ID 4 81 -2 1 837 21 0 0 0 chr17 33060623 33060644 -62212007 + AT_rich Low_complexity Low_complexity 1 21 0 1 837 630 217 160 0 chr17 33060645 33060820 -62211831 - ID_B1 SINE B4 -4 220 18 1 837 234 365 42 0 chr17 33060835 33060931 -62211720 - PB1 SINE Alu -12 115 16 1 837 546 81 23 0 chr17 33060953 33061039 -62211612 - B1_Mus2 SINE Alu 0 147 60 1 837 27 0 0 0 chr17 33062868 33062895 -62209756 + AT_rich Low_complexity Low_complexity 1 27 0 1 837 285 109 109 0 chr17 33063306 33063361 -62209290 + B1_Mur2 SINE Alu 89 149 0 1 837 319 197 48 6 chr17 33063721 33063825 -62208826 - B3A SINE B2 -13 203 94 1 837 304 293 69 143 chr17 33063987 33064162 -62208489 + RSINE1 SINE B4 4 165 0 1 837 207 220 0 0 chr17 33064165 33064215 -62208436 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 837 282 333 0 11 chr17 33065262 33065353 -62207298 + PB1 SINE Alu 30 119 -8 1 837 306 326 71 10 chr17 33065383 33065482 -62207169 + PB1D10 SINE Alu 6 110 -7 1 837 280 111 0 22 chr17 33065496 33065542 -62207109 - PB1 SINE Alu -7 120 76 1 837 360 146 20 30 chr17 33068045 33068144 -62204507 + (TCTCTG)n Simple_repeat Simple_repeat 5 102 0 1 837 216 67 0 0 chr17 33068149 33068179 -62204472 + (CCCCCT)n Simple_repeat Simple_repeat 2 31 0 1 837 207 0 0 0 chr17 33068280 33068303 -62204348 + (A)n Simple_repeat Simple_repeat 1 23 0 1 837 350 180 96 130 chr17 33068319 33068427 -62204224 + B1_Mur2 SINE Alu 1 105 -44 1 837 525 32 0 0 chr17 33068427 33068490 -62204161 + (CAAAA)n Simple_repeat Simple_repeat 5 67 0 1 837 268 239 42 0 chr17 33068503 33068574 -62204077 - ID4_ SINE ID 0 83 10 1 837 317 227 122 10 chr17 33068581 33068679 -62203972 - PB1D10 SINE Alu -2 115 7 1 837 834 177 14 0 chr17 33068891 33069032 -62203619 + B1_Mur4 SINE Alu 2 144 -6 1 837 534 143 0 0 chr17 33069035 33069140 -62203511 + (GA)n Simple_repeat Simple_repeat 1 105 0 1 837 213 39 0 0 chr17 33069134 33069160 -62203491 + (GGAA)n Simple_repeat Simple_repeat 4 29 0 1 837 567 0 0 0 chr17 33069160 33069223 -62203428 + (GAGAA)n Simple_repeat Simple_repeat 3 65 0 1 837 188 100 25 0 chr17 33071023 33071063 -62201588 + (TTTTTG)n Simple_repeat Simple_repeat 3 43 0 1 837 1037 116 14 0 chr17 33071077 33071223 -62201428 - B1_Mur4 SINE Alu -2 148 1 1 837 390 21 0 0 chr17 33071676 33071723 -62200928 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 837 337 281 64 32 chr17 33071727 33071852 -62200799 - RSINE1 SINE B4 -34 131 3 1 837 935 208 16 5 chr17 33072609 33072793 -62199858 - B3A SINE B2 -10 188 3 1 837 678 301 24 0 chr17 33072947 33073160 -62199491 + ID_B1 SINE B4 1 218 -6 1 837 1256 56 39 0 chr17 33073308 33073487 -62199164 + B2_Mm2 SINE B2 10 195 0 1 837 837 139 35 0 chr17 33073592 33073760 -62198891 - URR1B DNA MER1_type 0 225 52 1 837 336 206 163 0 chr17 33074005 33074097 -62198554 + PB1D7 SINE Alu 5 111 -9 1 837 272 333 5 129 chr17 33074180 33074390 -62198261 + B3 SINE B2 3 186 -30 1 837 216 97 0 0 chr17 33074401 33074432 -62198219 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 837 467 291 14 7 chr17 33074455 33074597 -62198054 - B1_Mur2 SINE Alu -6 143 1 1 837 746 255 66 0 chr17 33074672 33074868 -62197783 + B3 SINE B2 1 209 -7 1 837 534 143 0 0 chr17 33074893 33074984 -62197667 + (GGA)n Simple_repeat Simple_repeat 3 93 0 1 837 540 147 0 39 chr17 33075058 33075166 -62197485 + B1_Mur4 SINE Alu 43 145 -5 1 837 842 103 0 7 chr17 33075172 33075309 -62197342 + (GGA)n Simple_repeat Simple_repeat 3 138 0 1 837 405 0 0 0 chr17 33075625 33075670 -62196981 + (TCTA)n Simple_repeat Simple_repeat 3 47 0 1 837 962 144 7 0 chr17 33076129 33076275 -62196376 - B1_Mus1 SINE Alu 0 148 2 1 837 722 265 44 29 chr17 33076664 33076742 -62195909 - B4 SINE B4 -2 290 216 1 837 207 0 0 0 chr17 33076742 33076765 -62195886 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1 837 722 265 44 29 chr17 33076765 33076892 -62195759 - B4 SINE B4 -77 215 82 1 837 1022 229 146 33 chr17 33076914 33077244 -62195407 + ORR1D2 LTR MaLR 1 367 -3 1 837 1065 300 115 57 chr17 33078487 33078914 -62193737 + Lx7 LINE L1 4997 5430 -417 1 837 848 221 35 5 chr17 33078914 33079114 -62193537 + B3 SINE B2 1 206 -10 1 837 1065 288 88 17 chr17 33079114 33079513 -62193138 + Lx7 LINE L1 5431 5909 -1787 1 837 324 0 0 0 chr17 33079920 33079956 -62192695 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 837 689 34 0 11 chr17 33080571 33080660 -62191991 + (TTTC)n Simple_repeat Simple_repeat 3 90 0 1 837 805 164 0 22 chr17 33080662 33080799 -62191852 - B1_Mus2 SINE Alu -13 134 1 1 837 299 305 66 33 chr17 33081487 33081609 -62191042 + B3A SINE B2 73 198 0 1 837 312 291 92 90 chr17 33081649 33081722 -62190929 + ERVL-B4-int LTR ERVL 5314 5378 -336 1 837 620 180 102 92 chr17 33081722 33081918 -62190733 + B3A SINE B2 1 198 0 1 837 312 291 92 90 chr17 33081918 33082244 -62190407 + ERVL-B4-int LTR ERVL 5379 5714 0 1 837 523 156 30 30 chr17 33082445 33082544 -62190107 - B1_Mus2 SINE Alu -14 133 35 1 837 569 315 50 25 chr17 33082559 33082836 -62189815 + MT2A LTR ERVL 247 530 -3 2 837 1341 286 61 26 chr17 33084945 33085578 -62187073 - Lx5 LINE L1 -705 6755 5873 2 837 1399 217 95 6 chr17 33085586 33085924 -62186727 + MTD LTR MaLR 44 411 -8 2 837 310 265 0 0 chr17 33085925 33085993 -62186658 + ID_B1 SINE B4 90 157 -67 2 837 234 302 14 45 chr17 33085993 33086013 -62186638 + B1F SINE Alu 9 106 -11 2 837 231 326 84 15 chr17 33086072 33086203 -62186448 - MLT1J-int LTR MaLR -29 1358 1219 2 837 686 284 86 36 chr17 33086294 33086572 -62186079 + B4 SINE B4 1 292 0 2 837 1029 99 7 0 chr17 33086728 33086879 -62185772 + B2_Mm1t SINE B2 1 152 -41 2 837 387 0 0 0 chr17 33086881 33086924 -62185727 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 2 837 343 107 13 34 chr17 33086944 33087011 -62185640 + B2_Mm2 SINE B2 46 116 -82 2 837 236 42 0 77 chr17 33087001 33087053 -62185598 + B2_Mm1t SINE B2 138 185 -8 2 837 23 0 0 0 chr17 33087139 33087162 -62185489 + AT_rich Low_complexity Low_complexity 1 23 0 2 837 1693 101 18 95 chr17 33087181 33087482 -62185169 + ORR1A4 LTR MaLR 1 286 -43 2 837 1363 96 5 5 chr17 33087482 33087671 -62184980 + B2_Mm2 SINE B2 1 189 -6 2 837 1693 101 18 95 chr17 33087671 33087696 -62184955 + ORR1A4 LTR MaLR 287 302 -27 2 837 284 279 75 28 chr17 33087703 33087810 -62184841 - B1F1 SINE Alu -24 125 14 2 837 302 247 62 0 chr17 33087902 33087983 -62184668 - B4A SINE B4 -25 267 182 2 837 444 197 4 2 chr17 33088001 33088099 -62184552 - B1_Mur3 SINE Alu -1 148 49 2 837 239 236 0 122 chr17 33088083 33088165 -62184486 - B4A SINE B4 -99 193 122 2 837 308 318 9 45 chr17 33088371 33088483 -62184168 + B1F SINE Alu 2 109 -40 2 837 306 50 0 0 chr17 33089932 33089972 -62182679 + (ATTG)n Simple_repeat Simple_repeat 1 40 0 2 837 437 322 74 0 chr17 33089975 33090124 -62182527 - RSINE1 SINE B4 -2 163 4 2 837 211 263 78 13 chr17 33090191 33090268 -62182383 + ID4 SINE ID 2 83 0 2 837 182 128 26 0 chr17 33090353 33090392 -62182259 + T-rich Low_complexity Low_complexity 2 41 0 2 837 683 158 126 0 chr17 33090392 33090519 -62182132 - B1_Mus2 SINE Alu 0 147 5 2 837 995 206 30 15 chr17 33090866 33091068 -62181583 + ID_B1 SINE B4 5 209 -15 2 837 678 25 0 0 chr17 33091317 33091397 -62181254 + (CCA)n Simple_repeat Simple_repeat 1 80 0 2 837 397 209 123 9 chr17 33091406 33091512 -62181139 - PB1D9 SINE Alu -1 119 2 2 837 377 0 0 40 chr17 33091535 33091585 -62181066 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 2 837 213 222 0 0 chr17 33091585 33091630 -62181021 - PB1D10 SINE Alu -30 87 43 2 837 326 277 0 43 chr17 33091681 33091801 -62180850 + B1_Mur1 SINE Alu 2 139 -10 2 837 252 0 0 0 chr17 33091801 33091829 -62180822 + (CAA)n Simple_repeat Simple_repeat 2 29 0 2 837 884 168 0 27 chr17 33092025 33092172 -62180479 - B1_Mur3 SINE Alu -5 144 2 2 837 1808 120 14 95 chr17 33092292 33092651 -62180000 + ORR1B1 LTR MaLR 65 394 0 2 837 388 302 34 34 chr17 33093439 33093614 -62179037 + RLTR42-int LTR ERVK 1175 1349 -4173 2 837 397 303 38 8 chr17 33093622 33093755 -62178896 - 7SK RNA RNA -91 240 104 2 837 281 291 25 0 chr17 33095658 33095737 -62176914 - ID4 SINE ID 0 83 3 2 837 414 276 28 28 chr17 33095741 33095849 -62176802 - PB1D10 SINE Alu -9 108 1 2 837 1288 266 45 6 chr17 33095913 33096269 -62176382 + ORR1D2 LTR MaLR 1 370 0 2 837 2059 131 32 74 chr17 33096325 33096728 -62175923 - ORR1B1 LTR MaLR -8 386 1 2 837 259 133 44 0 chr17 33096786 33096831 -62175820 - MIRc SINE MIR -102 166 120 2 837 279 293 24 0 chr17 33096917 33096999 -62175652 + B4A SINE B4 1 84 -208 2 837 214 171 0 24 chr17 33097019 33097061 -62175590 + CT-rich Low_complexity Low_complexity 3 43 0 2 837 509 317 37 0 chr17 33097061 33097222 -62175429 + B4A SINE B4 105 271 -21 2 837 261 271 135 0 chr17 33097336 33097432 -62175219 - PB1D10 SINE Alu -7 110 2 2 837 842 84 0 27 chr17 33097875 33098021 -62174630 + (GGA)n Simple_repeat Simple_repeat 3 144 0 2 837 660 131 0 0 chr17 33098038 33098145 -62174506 + B1_Mur3 SINE Alu 41 147 -2 2 837 2058 110 19 0 chr17 33098203 33098511 -62174140 + ORR1A2 LTR MaLR 1 314 -13 2 837 441 0 0 0 chr17 33098534 33098583 -62174068 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 837 1250 102 17 0 chr17 33098687 33098863 -62173788 + B2_Mm1t SINE B2 1 179 -14 2 837 2526 114 37 20 chr17 33098933 33099423 -62173228 - LTRIS4 LTR ERV1 -7 557 1 2 837 231 36 0 0 chr17 33099473 33099501 -62173150 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 2 837 312 288 51 43 chr17 33099541 33099679 -62172972 + B4 SINE B4 66 204 -88 2 837 652 200 8 0 chr17 33099571 33099696 -62172955 + B1_Mur1 SINE Alu 7 132 -17 2 837 2513 82 43 136 chr17 33100101 33100565 -62172086 - BGLII LTR ERVK 0 421 1 2 837 286 266 0 0 chr17 33100683 33100747 -62171904 + ID4 SINE ID 17 80 -3 2 837 345 317 75 43 chr17 33100744 33100932 -62171719 + MLT2C1 LTR ERVL 133 326 -71 2 837 312 299 35 0 chr17 33100934 33101021 -62171630 + PB1D10 SINE Alu 1 90 -27 2 837 282 244 51 13 chr17 33101091 33101170 -62171481 - MTE2a LTR MaLR -17 362 281 2 837 633 279 82 59 chr17 33101453 33101834 -62170817 + L1MA4 LINE L1 5596 5994 -297 2 837 301 277 143 49 chr17 33102043 33102240 -62170411 + B4A SINE B4 1 207 -85 2 837 252 0 0 0 chr17 33102240 33102268 -62170383 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 837 301 277 143 49 chr17 33102268 33102336 -62170315 + B4A SINE B4 208 291 -1 2 837 486 0 0 0 chr17 33103277 33103331 -62169320 + (TC)n Simple_repeat Simple_repeat 1 54 0 2 837 260 247 47 94 chr17 33103337 33103422 -62169229 - ID4 SINE ID -1 82 2 2 837 328 261 43 0 chr17 33103595 33103687 -62168964 - B1F2 SINE Alu 0 149 54 2 837 2876 155 144 19 chr17 33103714 33104435 -62168216 - RMER21A LTR ERV1 -8 939 44 2 837 319 215 97 0 chr17 33104547 33104640 -62168011 + PB1D9 SINE Alu 19 120 0 2 837 676 219 36 31 chr17 33104797 33104990 -62167661 - B3A SINE B2 -3 195 2 2 837 450 303 136 17 chr17 33105070 33105950 -62166701 - L1M2 LINE L1 -2670 3473 2489 2 837 360 0 0 0 chr17 33105972 33106012 -62166639 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 837 638 239 48 30 chr17 33106012 33106180 -62166471 - B3 SINE B2 -41 175 5 2 837 188 100 0 70 chr17 33106192 33106205 -62166446 + polypyrimidine Low_complexity Low_complexity 29 41 0 2 837 1434 78 16 10 chr17 33106205 33106398 -62166253 - B2_Mm2 SINE B2 -1 194 1 2 837 5592 45 10 0 chr17 33106398 33107100 -62165551 - L1_Mus1 LINE L1 0 6567 5888 2 837 9540 97 6 0 chr17 33107100 33108426 -62164225 - L1_Mm LINE L1 -670 5213 3880 2 837 256 222 96 24 chr17 33108427 33108510 -62164141 - L1M2 LINE L1 -3926 2217 2129 2 837 597 216 112 0 chr17 33108538 33108672 -62163979 - B1_Mur4 SINE Alu 0 150 2 2 837 701 196 0 43 chr17 33108796 33108935 -62163716 - B1_Mur2 SINE Alu -16 133 1 2 837 1203 61 0 0 chr17 33109185 33109332 -62163319 + B1_Mus1 SINE Alu 2 148 0 2 837 207 0 0 0 chr17 33109810 33109833 -62162818 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 837 301 267 152 22 chr17 33110372 33110510 -62162141 + L1M2 LINE L1 5132 5287 -856 2 837 234 307 155 17 chr17 33110576 33110808 -62161843 + L1M2 LINE L1 5367 5630 -661 2 837 429 237 52 17 chr17 33111102 33111218 -62161433 - PB1D9 SINE Alu 0 120 1 2 837 1014 269 43 7 chr17 33111445 33111745 -62160906 - Lx8 LINE L1 -526 6947 6637 2 837 1856 186 78 8 chr17 33111745 33112129 -62160522 - MTD LTR MaLR -7 412 2 2 837 501 248 62 0 chr17 33112433 33112546 -62160105 + B3A SINE B2 1 120 -78 2 837 689 258 0 0 chr17 33112826 33112989 -62159662 + MurSatRep1 Unknown Unknown 581 743 -1394 2 837 469 290 49 49 chr17 33113725 33113888 -62158763 - RSINE1 SINE B4 0 165 3 2 837 212 352 124 0 chr17 33113938 33114043 -62158608 - PB1 SINE Alu -8 119 2 2 837 387 348 37 43 chr17 33114958 33115491 -62157160 + MurSatRep1 Unknown Unknown 1725 2049 -88 2 837 684 259 69 34 chr17 33116312 33116516 -62156135 - B3 SINE B2 -5 211 1 2 837 382 268 184 37 chr17 33116991 33117154 -62155497 + B3A SINE B2 4 190 -8 2 837 255 152 49 25 chr17 33117154 33117235 -62155416 + (TA)n Simple_repeat Simple_repeat 2 84 0 2 837 1221 113 0 0 chr17 33117484 33117795 -62154856 + (TCCA)n Simple_repeat Simple_repeat 1 311 0 2 837 850 167 28 21 chr17 33117817 33117958 -62154693 - B1_Mus1 SINE Alu -6 142 1 2 837 273 295 164 67 chr17 33118645 33118692 -62153959 - L1M2 LINE L1 -885 4962 4921 2 837 504 0 0 0 chr17 33118692 33118748 -62153903 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 837 475 279 135 81 chr17 33118748 33119359 -62153292 - L1M2 LINE L1 -1188 4955 4314 2 837 683 12 47 0 chr17 33119364 33119450 -62153201 - B2_Mm2 SINE B2 -32 163 74 2 837 608 283 29 35 chr17 33119800 33119972 -62152679 + B3A SINE B2 28 198 0 2 837 8227 162 17 103 chr17 33120383 33121029 -62151622 + L1_Mur1 LINE L1 4228 4870 -1016 2 837 342 0 0 0 chr17 33121029 33121067 -62151584 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 2 837 996 130 0 25 chr17 33121068 33121087 -62151564 - B2_Mm2 SINE B2 -41 154 136 2 837 198 0 0 0 chr17 33121087 33121109 -62151542 + (TA)n Simple_repeat Simple_repeat 1 22 0 2 837 996 130 0 25 chr17 33121109 33121247 -62151404 - B2_Mm2 SINE B2 -60 135 1 2 837 8227 162 17 103 chr17 33121247 33122246 -62150405 + L1_Mur1 LINE L1 4871 5877 -9 2 837 3959 128 154 6 chr17 33122296 33122938 -62149713 + RMER19A LTR ERVK 1 737 0 2 837 3042 170 100 7 chr17 33123018 33123606 -62149045 - RLTR17 LTR ERVK -48 644 2 2 837 352 154 15 44 chr17 33123606 33123674 -62148977 + URR1B DNA MER1_type 160 225 0 3 837 421 236 22 0 chr17 33123674 33123763 -62148888 + RSINE1 SINE B4 22 112 -53 3 837 12765 163 49 24 chr17 33123770 33126395 -62146256 - L1_Mur1 LINE L1 -2097 3780 1101 3 837 207 0 0 0 chr17 33126395 33126418 -62146233 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 3 837 1516 181 175 8 chr17 33126418 33126616 -62146035 - L1_Mur1 LINE L1 -5884 1100 886 3 837 1937 244 37 112 chr17 33126871 33127541 -62145110 - L1_Mur3 LINE L1 -96 5784 5165 3 837 2373 240 39 2 chr17 33127641 33128209 -62144442 + L1_Mur3 LINE L1 3440 4028 -1852 3 837 464 186 36 114 chr17 33128209 33128349 -62144302 + MT2B LTR ERVL 150 278 -323 3 837 983 113 7 0 chr17 33128233 33128374 -62144277 + B1_Mus1 SINE Alu 7 148 0 3 837 26 0 0 0 chr17 33128676 33128702 -62143949 + AT_rich Low_complexity Low_complexity 1 26 0 3 837 1445 88 39 0 chr17 33128986 33129168 -62143483 + B2_Mm2 SINE B2 2 190 -5 3 837 701 177 24 0 chr17 33131459 33131583 -62141068 + ORR1C1 LTR MaLR 164 290 -88 3 837 334 210 220 0 chr17 33132009 33132109 -62140542 + ID_B1 SINE B4 102 223 -1 3 837 869 174 14 0 chr17 33132410 33132548 -62140103 - B1_Mur4 SINE Alu -10 140 1 3 837 492 307 42 52 chr17 33132570 33132783 -62139868 - ID_B1 SINE B4 -12 212 2 3 837 192 77 0 0 chr17 33132945 33132971 -62139680 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 837 622 358 83 42 chr17 33133008 33133218 -62139433 - MTE-int LTR MaLR -252 1328 1097 3 837 1331 97 32 21 chr17 33133218 33133408 -62139243 + B2_Mm2 SINE B2 2 193 -2 3 837 743 320 83 73 chr17 33133408 33133868 -62138783 - MTE-int LTR MaLR -484 1096 588 3 837 341 202 40 69 chr17 33133840 33133941 -62138710 + MTD LTR MaLR 321 418 -1 3 837 561 278 5 58 chr17 33134034 33134061 -62138590 - ID_B1 SINE B4 -46 246 149 3 837 857 185 0 0 chr17 33134061 33134196 -62138455 - B1_Mur2 SINE Alu -5 144 10 3 837 561 278 5 58 chr17 33134196 33134213 -62138438 - ID_B1 SINE B4 -46 148 78 3 837 240 35 0 0 chr17 33134220 33134249 -62138402 + (TGG)n Simple_repeat Simple_repeat 1 29 0 3 837 1550 28 72 0 chr17 33134363 33134543 -62138108 + B2_Mm1t SINE B2 1 193 0 3 837 31 0 0 0 chr17 33134561 33134592 -62138059 + AT_rich Low_complexity Low_complexity 1 31 0 3 837 415 259 72 6 chr17 33134592 33134723 -62137928 - B3 SINE B2 0 198 52 3 837 629 230 126 40 chr17 33136013 33136212 -62136439 + B3 SINE B2 1 216 0 3 837 1222 148 419 7 chr17 33136560 33136839 -62135812 + ORR1B1 LTR MaLR 1 394 0 3 837 1034 110 14 0 chr17 33137055 33137200 -62135451 - B1_Mur3 SINE Alu 0 149 3 3 837 695 307 76 0 chr17 33138245 33138470 -62134181 - MTE-int LTR MaLR -1204 376 135 3 837 595 292 67 70 chr17 33138552 33138968 -62133683 + MurSatRep1 Unknown Unknown 597 1011 -1126 3 837 286 310 69 69 chr17 33140051 33140356 -62132295 + MurSatRep1 Unknown Unknown 1745 2049 -88 3 837 343 288 21 21 chr17 33140378 33140939 -62131712 + MMSAT4 Satellite Satellite 1 561 -22 3 837 288 352 16 22 chr17 33140809 33140992 -62131659 + MurSatRep1 Unknown Unknown 1747 1928 -209 3 837 536 301 44 13 chr17 33141056 33141214 -62131437 + RSINE1 SINE B4 1 163 -2 3 837 863 156 0 39 chr17 33141255 33141409 -62131242 - B1_Mus1 SINE Alu 0 148 1 3 837 229 254 14 48 chr17 33141409 33141439 -62131212 - ORR1B1-int LTR MaLR -865 644 620 3 837 548 257 90 11 chr17 33141443 33141620 -62131031 - B3A SINE B2 -7 191 1 3 837 23 0 0 0 chr17 33141754 33141777 -62130874 + AT_rich Low_complexity Low_complexity 1 23 0 3 837 321 327 78 7 chr17 33141804 33141958 -62130693 - RSINE1 SINE B4 0 165 1 3 837 264 282 14 27 chr17 33142754 33142827 -62129824 + RSINE1 SINE B4 8 79 -86 3 837 7134 83 2 1 chr17 33143095 33144037 -62128614 - L1_Mus2 LINE L1 -469 5414 4472 3 837 7820 61 10 0 chr17 33144029 33145170 -62127481 + L1_Mus2 LINE L1 5414 6565 -1 3 837 900 177 14 0 chr17 33145462 33145609 -62127042 + B1_Mur4 SINE Alu 1 149 -1 3 837 316 225 100 0 chr17 33145706 33145786 -62126865 + B1_Mur1 SINE Alu 30 117 -32 3 837 198 71 0 0 chr17 33146465 33146493 -62126158 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 837 589 247 99 81 chr17 33146644 33146821 -62125830 - B3 SINE B2 0 216 35 3 837 518 197 242 25 chr17 33146821 33146941 -62125710 - B1_Mur4 SINE Alu 0 150 5 3 837 589 247 99 81 chr17 33146941 33146974 -62125677 - B3 SINE B2 -182 34 2 3 837 299 254 316 0 chr17 33146980 33147157 -62125494 - Lx9 LINE L1 0 7644 7412 3 837 225 312 0 0 chr17 33147157 33147205 -62125446 - PB1D9 SINE Alu -68 52 5 3 837 315 0 0 0 chr17 33147232 33147267 -62125384 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 837 3284 282 135 42 chr17 33147770 33149387 -62123264 + Lx8 LINE L1 3719 5477 -403 3 837 1179 43 0 35 chr17 33149387 33149530 -62123121 + B1_Mus1 SINE Alu 2 139 -9 3 837 459 0 0 0 chr17 33149530 33149581 -62123070 + (CAAAC)n Simple_repeat Simple_repeat 2 52 0 3 837 3284 283 134 43 chr17 33149581 33149967 -62122684 + Lx8 LINE L1 5478 5913 -1560 3 837 1582 49 16 16 chr17 33149967 33150154 -62122497 - B2_Mm2 SINE B2 -8 187 1 3 837 1529 292 121 51 chr17 33150154 33150875 -62121776 + Lx8 LINE L1 5914 6684 -789 3 837 4660 186 62 6 chr17 33150912 33151783 -62120868 - Lx6 LINE L1 -194 7502 6321 3 837 265 206 0 5 chr17 33151814 33151879 -62120772 - B2_Mm2 SINE B2 -107 109 47 3 837 1030 127 77 18 chr17 33151911 33152080 -62120571 - B2_Mm1t SINE B2 -14 179 1 3 837 497 146 73 0 chr17 33152085 33152167 -62120484 - Lx6 LINE L1 -1141 6319 6232 3 837 745 268 213 17 chr17 33152157 33152457 -62120194 + Lx8 LINE L1 6666 7024 -449 3 837 394 234 25 83 chr17 33152476 33152489 -62120162 + MT2B LTR ERVL 151 156 -445 3 837 609 183 43 0 chr17 33152489 33152604 -62120047 + B1_Mur2 SINE Alu 2 121 -28 3 837 242 279 209 0 chr17 33152639 33152725 -62119926 + Lx8 LINE L1 7081 7184 -289 3 837 2228 52 65 0 chr17 33152738 33153044 -62119607 - BGLII LTR ERVK 0 421 96 3 837 585 272 61 0 chr17 33153334 33153481 -62119170 + B3A SINE B2 1 156 -42 3 837 533 241 80 7 chr17 33153577 33153715 -62118936 + B1_Mur2 SINE Alu 1 148 -1 3 837 267 31 0 0 chr17 33153731 33153763 -62118888 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 3 837 471 232 34 43 chr17 33153801 33153918 -62118733 + PB1D9 SINE Alu 4 119 -1 3 837 23 0 0 0 chr17 33154395 33154418 -62118233 + AT_rich Low_complexity Low_complexity 1 23 0 3 837 586 202 52 35 chr17 33154625 33154799 -62117852 - B2_Mm2 SINE B2 -14 181 5 3 837 590 281 22 0 chr17 33155062 33155197 -62117454 - RSINE1 SINE B4 -12 153 16 3 837 342 283 27 19 chr17 33155343 33155722 -62116929 - MMSAT4 Satellite Satellite -8 382 1 3 837 291 352 43 43 chr17 33155663 33155753 -62116898 - MurSatRep1 Unknown Unknown -88 2049 1977 3 837 368 314 0 0 chr17 33155753 33155890 -62116761 - MMSAT4 Satellite Satellite -1 167 31 3 837 291 352 43 43 chr17 33155890 33155920 -62116731 - MurSatRep1 Unknown Unknown -161 1976 1953 3 837 343 308 15 15 chr17 33155920 33156052 -62116599 - MMSAT4 Satellite Satellite 0 168 37 3 837 291 352 43 43 chr17 33156052 33156301 -62116350 - MurSatRep1 Unknown Unknown -88 1952 1747 3 837 244 284 29 29 chr17 33156256 33156394 -62116257 - MMSAT4 Satellite Satellite 0 168 31 3 837 198 0 0 0 chr17 33157213 33157235 -62115416 + (CTAA)n Simple_repeat Simple_repeat 3 24 0 3 837 315 0 0 0 chr17 33157235 33157270 -62115381 + (GGAA)n Simple_repeat Simple_repeat 2 36 0 3 837 997 12 83 0 chr17 33157272 33157596 -62115055 + (GGAAA)n Simple_repeat Simple_repeat 1 350 0 3 837 967 147 6 6 chr17 33157598 33157776 -62114875 + GA-rich Low_complexity Low_complexity 3 180 0 3 837 28 29 0 0 chr17 33157778 33157813 -62114838 + AT_rich Low_complexity Low_complexity 1 35 0 3 837 286 259 17 33 chr17 33157830 33157950 -62114701 + Lx8 LINE L1 7353 7470 -3 3 837 703 241 67 42 chr17 33158547 33158785 -62113866 - MurSatRep1 Unknown Unknown -1289 848 605 3 837 587 335 25 0 chr17 33158845 33159042 -62113609 + MTE-int LTR MaLR 150 351 -1229 3 837 1268 48 7 0 chr17 33159042 33159188 -62113463 + B1_Mus2 SINE Alu 1 147 0 3 837 207 61 39 39 chr17 33159188 33159239 -62113412 + (CAAAA)n Simple_repeat Simple_repeat 5 55 0 3 837 500 229 141 37 chr17 33159918 33160107 -62112544 + B3 SINE B2 2 187 -8 3 837 1284 199 51 20 chr17 33160107 33160399 -62112252 + Lx5 LINE L1 6749 7049 -1 3 837 1307 48 0 0 chr17 33160438 33160584 -62112067 - B1_Mus2 SINE Alu 0 147 2 3 837 1091 98 0 6 chr17 33160611 33160775 -62111876 + (TTC)n Simple_repeat Simple_repeat 3 165 0 3 838 498 207 227 7 chr17 33161816 33161957 -62110694 + Lx8 LINE L1 7122 7293 -180 3 838 889 154 66 0 chr17 33162070 33162206 -62110445 - B1_Mus2 SINE Alu 0 147 3 3 838 4329 201 56 72 chr17 33162222 33163636 -62109015 - RMER1A Other Other -2 1028 9 3 838 387 0 0 0 chr17 33163926 33163969 -62108682 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 838 412 157 0 0 chr17 33164132 33164202 -62108449 - B1_Mur1 SINE Alu -22 127 58 3 838 1871 93 83 138 chr17 33164331 33164679 -62107972 - ORR1A4 LTR MaLR 0 329 1 3 838 826 63 0 9 chr17 33164679 33164791 -62107860 - ORR1A4-int LTR MaLR 0 1963 1853 3 838 1318 82 13 80 chr17 33164784 33164969 -62107682 + MT-int LTR MaLR 807 981 -117 3 838 3364 35 2 98 chr17 33164969 33165125 -62107526 - MTA_Mm LTR MaLR 0 396 254 3 838 1306 41 0 0 chr17 33165125 33165272 -62107379 + B1_Mm SINE Alu 1 147 0 3 838 3364 35 2 98 chr17 33165272 33165553 -62107098 - MTA_Mm LTR MaLR -143 253 1 3 838 8127 68 15 70 chr17 33165553 33166716 -62105935 - MTA_Mm-int LTR MaLR 0 1098 1 3 838 3657 23 2 2 chr17 33166716 33167112 -62105539 - MTA_Mm LTR MaLR 0 396 1 3 838 265 73 0 0 chr17 33167113 33167154 -62105497 + MT-int LTR MaLR 980 1020 -78 3 838 1563 152 58 68 chr17 33167135 33167515 -62105136 - ORR1A4-int LTR MaLR -91 1701 1071 3 838 2385 147 150 2 chr17 33167504 33167976 -62104675 - ORR1A4-int LTR MaLR -1407 556 15 3 838 228 35 0 0 chr17 33168383 33168412 -62104239 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 838 498 289 74 30 chr17 33168516 33168717 -62103934 - B3A SINE B2 0 216 12 3 838 256 286 94 16 chr17 33169105 33169297 -62103354 + L1M3 LINE L1 4288 4494 -1646 3 838 504 0 0 0 chr17 33169676 33169732 -62102919 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 838 531 0 0 0 chr17 33169732 33169790 -62102861 + (GA)n Simple_repeat Simple_repeat 2 60 0 3 838 219 36 0 0 chr17 33170513 33170541 -62102110 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 838 648 245 0 13 chr17 33170859 33171008 -62101643 - B1_Mur2 SINE Alu -2 147 1 3 838 198 0 0 0 chr17 33171317 33171339 -62101312 + (TGG)n Simple_repeat Simple_repeat 3 24 0 3 838 1660 134 0 8 chr17 33171347 33171610 -62101041 - L1_Mm LINE L1 -514 5369 5109 4 838 6685 181 25 105 chr17 33171714 33174368 -62098283 + Lx6 LINE L1 903 3267 -2610 4 838 1191 61 0 0 chr17 33174368 33174515 -62098136 + B1_Mus2 SINE Alu 1 147 0 4 838 6685 153 25 72 chr17 33174515 33174715 -62097936 + Lx6 LINE L1 3265 3434 -2446 4 838 238 106 277 0 chr17 33174749 33174796 -62097855 + Lx6 LINE L1 3715 3774 -2106 4 838 5300 146 46 108 chr17 33174799 33175172 -62097479 + Lx6 LINE L1 4231 4579 -1301 4 838 1698 21 0 0 chr17 33175172 33175361 -62097290 + B2_Mm1a SINE B2 2 190 -3 4 838 5300 146 46 108 chr17 33175361 33176245 -62096406 + Lx6 LINE L1 4580 5410 -470 4 838 1372 235 144 47 chr17 33176244 33176687 -62095964 + Lx6 LINE L1 5932 6417 -1043 4 838 4228 182 58 9 chr17 33176723 33177519 -62095132 + Lx6 LINE L1 6621 7455 -5 4 838 1769 210 37 28 chr17 33178279 33178715 -62093936 + RLTR31_Mur LTR ERVK 88 527 -26 4 838 11885 113 41 14 chr17 33178745 33179854 -62092797 - L1_Mur2 LINE L1 -2294 3583 2444 4 838 1354 77 28 0 chr17 33179854 33180035 -62092616 + B2_Mm1a SINE B2 2 187 -6 4 838 11885 113 41 14 chr17 33180035 33180409 -62092242 - L1_Mur2 LINE L1 -3434 2443 2062 4 838 210 91 0 0 chr17 33180409 33180442 -62092209 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 838 11885 113 41 14 chr17 33180442 33180888 -62091763 - L1_Mur2 LINE L1 -3816 2061 1602 4 838 229 145 219 31 chr17 33180888 33180952 -62091699 + RLTR6_Mm LTR ERV1 1 76 -578 4 838 2242 106 224 42 chr17 33180997 33181478 -62091173 + RLTR6_Mm LTR ERV1 37 605 -49 4 838 67470 15 18 15 chr17 33181478 33189230 -62083421 + RLTR6-int LTR ERV1 1 7778 0 4 838 2105 117 228 42 chr17 33189339 33189813 -62082838 + RLTR6_Mm LTR ERV1 37 598 -56 4 838 3360 127 113 12 chr17 33189813 33190709 -62081942 - L1_Mur2 LINE L1 -4288 1589 581 4 838 227 217 14 14 chr17 33190814 33190884 -62081767 + (CAAA)n Simple_repeat Simple_repeat 3 72 0 4 838 3539 15 5 0 chr17 33191636 33192030 -62080621 + MTA_Mm LTR MaLR 1 396 0 4 838 9871 12 3 0 chr17 33192030 33193125 -62079526 + MTA_Mm-int LTR MaLR 1 1098 0 4 838 3539 15 5 0 chr17 33193125 33193519 -62079132 + MTA_Mm LTR MaLR 1 396 0 4 838 9871 12 3 0 chr17 33193519 33194614 -62078037 + MTA_Mm-int LTR MaLR 1 1098 0 4 838 3539 15 5 0 chr17 33194614 33195008 -62077643 + MTA_Mm LTR MaLR 1 396 0 4 838 271 323 0 0 chr17 33195014 33195110 -62077541 - L1_Mur2 LINE L1 -3428 2449 2354 4 838 1109 281 9 13 chr17 33195153 33195470 -62077181 - MTD LTR MaLR 0 419 104 4 838 372 286 69 31 chr17 33195473 33195603 -62077048 + B1_Mur1 SINE Alu 10 144 -5 4 838 312 270 54 0 chr17 33195610 33195721 -62076930 - MTD LTR MaLR -295 124 8 4 838 329 267 79 0 chr17 33195895 33195996 -62076655 + B1_Mm SINE Alu 19 127 -20 4 838 564 259 7 0 chr17 33196227 33196362 -62076289 + B3A SINE B2 1 136 -62 4 838 672 198 18 39 chr17 33196356 33196544 -62076107 - B3 SINE B2 -6 189 15 4 838 1502 157 10 15 chr17 33196987 33197269 -62075382 + L1_Mur2 LINE L1 5268 5553 -626 4 838 2458 309 69 68 chr17 33197270 33199719 -62072932 + RLTR6-int LTR ERV1 3967 6232 -1324 4 838 402 282 75 23 chr17 33200224 33200398 -62072253 + RLTR41 LTR ERV1 264 446 0 4 838 22 0 0 0 chr17 33200455 33200477 -62072174 + AT_rich Low_complexity Low_complexity 1 22 0 4 838 1107 198 19 0 chr17 33200553 33200765 -62071886 + B3 SINE B2 1 216 0 4 838 606 257 0 14 chr17 33200799 33200941 -62071710 + B1_Mur4 SINE Alu 10 149 -1 4 838 246 128 0 0 chr17 33202276 33202315 -62070336 + (CAT)n Simple_repeat Simple_repeat 3 41 0 4 838 255 298 35 12 chr17 33205876 33205961 -62066690 + RSINE1 SINE B4 43 129 -36 4 838 397 207 11 11 chr17 33206358 33206446 -62066205 + RSINE1 SINE B4 45 132 -33 4 838 22 0 0 0 chr17 33206472 33206494 -62066157 + AT_rich Low_complexity Low_complexity 1 22 0 4 838 617 309 29 0 chr17 33206504 33206711 -62065940 + B3 SINE B2 4 216 0 4 838 672 122 0 0 chr17 33206855 33206978 -62065673 + (TC)n Simple_repeat Simple_repeat 2 124 0 4 838 421 382 85 29 chr17 33207013 33207285 -62065366 - B4A SINE B4 -4 288 2 4 838 24 0 0 0 chr17 33207309 33207333 -62065318 + AT_rich Low_complexity Low_complexity 1 24 0 4 838 643 164 37 0 chr17 33207364 33207498 -62065153 + Lx9 LINE L1 7506 7644 0 4 838 30 45 0 0 chr17 33207502 33207546 -62065105 + AT_rich Low_complexity Low_complexity 1 44 0 4 838 615 233 30 8 chr17 33207703 33207837 -62064814 + B1_Mur1 SINE Alu 13 149 0 4 838 1506 53 16 0 chr17 33207868 33208056 -62064595 - B2_Mm1t SINE B2 -2 191 1 4 838 598 167 77 31 chr17 33208058 33208188 -62064463 + RMER1A Other Other 883 1018 -12 4 838 261 0 0 0 chr17 33208189 33208218 -62064433 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 4 838 393 272 119 8 chr17 33208570 33208696 -62063955 - L1M4c LINE L1 -6190 194 55 4 838 490 311 40 13 chr17 33209364 33209514 -62063137 - RSINE1 SINE B4 -4 161 8 4 838 283 229 279 0 chr17 33209531 33209671 -62062980 + Lx8 LINE L1 7293 7471 -2 4 838 865 304 75 43 chr17 33210036 33210679 -62061972 - L1M2 LINE L1 -1555 4588 3926 4 838 465 66 0 0 chr17 33210717 33210778 -62061873 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 838 748 213 0 26 chr17 33210781 33210935 -62061716 - B3A SINE B2 -48 150 1 4 838 1263 218 67 8 chr17 33211233 33211501 -62061150 - ORR1C2 LTR MaLR -15 369 86 4 838 1267 203 97 10 chr17 33211509 33211808 -62060843 - Lx9 LINE L1 -248 7396 7072 4 838 397 341 35 12 chr17 33211923 33212092 -62060559 - B4 SINE B4 -11 281 109 4 838 400 276 0 0 chr17 33212601 33212699 -62059952 - PB1D9 SINE Alu -10 110 13 4 838 744 249 101 103 chr17 33212804 33213172 -62059479 + MTE2a LTR MaLR 13 379 0 4 838 705 275 19 37 chr17 33213305 33213520 -62059131 - B3 SINE B2 -4 212 2 4 838 466 299 72 26 chr17 33213523 33213788 -62058863 - L1M2 LINE L1 -2090 4053 3777 4 838 405 259 24 8 chr17 33213810 33213968 -62058683 - L1M2 LINE L1 -2949 3191 3036 4 838 280 289 13 0 chr17 33213970 33214046 -62058605 - BC1_Mm scRNA scRNA -62 90 14 4 838 392 219 85 28 chr17 33214055 33214196 -62058455 - L1M2 LINE L1 -3110 3033 2885 4 838 1748 184 16 46 chr17 33214231 33214602 -62058049 - ORR1C1 LTR MaLR -18 360 1 4 838 4754 121 21 81 chr17 33214704 33215668 -62056983 - RMER17A2 LTR ERVK 0 906 1 4 838 323 281 43 15 chr17 33215843 33216000 -62056651 - MER47B DNA MER2_type -80 338 231 4 838 309 109 0 0 chr17 33216124 33216170 -62056481 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 838 815 206 7 0 chr17 33216171 33216317 -62056334 - B1_Mus1 SINE Alu -1 147 1 4 838 245 320 0 26 chr17 33216553 33216630 -62056021 + B1F2 SINE Alu 1 75 -74 4 838 1424 65 22 0 chr17 33216636 33216820 -62055831 + B2_Mm1a SINE B2 2 189 -4 4 838 813 133 49 199 chr17 33216820 33217046 -62055605 - ORR1B1 LTR MaLR -89 305 114 4 838 1244 119 0 11 chr17 33217357 33217536 -62055115 + B2_Mm2 SINE B2 1 177 -18 4 838 24 0 0 0 chr17 33217536 33217560 -62055091 + AT_rich Low_complexity Low_complexity 1 24 0 4 838 481 236 0 19 chr17 33218627 33218735 -62053916 + Lx7 LINE L1 7255 7360 -336 4 838 438 256 12 56 chr17 33218750 33218911 -62053740 - Lx6 LINE L1 -30 7430 7277 4 838 253 291 157 0 chr17 33219013 33219147 -62053504 + Lx7 LINE L1 7535 7689 -7 4 838 2090 203 141 8 chr17 33219147 33219615 -62053036 - Lx6 LINE L1 0 7460 6931 4 838 3221 28 33 5 chr17 33219616 33220040 -62052611 - RLTR10C LTR ERVK 0 436 1 4 838 501 155 149 37 chr17 33220040 33220062 -62052589 - Lx6 LINE L1 -543 6917 6896 4 838 261 0 0 0 chr17 33220062 33220091 -62052560 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 838 501 155 149 37 chr17 33220091 33220175 -62052476 - Lx6 LINE L1 -565 6895 6799 4 838 1888 212 78 16 chr17 33220164 33220590 -62052061 - Lx6 LINE L1 -984 6476 6025 4 838 6396 127 45 15 chr17 33220643 33221854 -62050797 - Lx LINE L1 -2 6652 5408 4 838 367 227 78 10 chr17 33222206 33222335 -62050316 + B3A SINE B2 2 205 -11 4 838 1169 49 0 0 chr17 33223111 33223255 -62049396 + B1_Mm SINE Alu 4 147 0 4 838 230 282 51 68 chr17 33223972 33223991 -62048660 + MT2B LTR ERVL 142 158 -443 4 838 494 236 41 0 chr17 33223991 33224114 -62048537 + B1_Mur2 SINE Alu 1 128 -21 4 838 189 0 0 0 chr17 33225050 33225071 -62047580 + (A)n Simple_repeat Simple_repeat 1 21 0 4 838 1171 62 7 0 chr17 33225863 33226008 -62046643 + B1_Mm SINE Alu 2 147 0 4 838 279 93 0 0 chr17 33226009 33226052 -62046599 + (A)n Simple_repeat Simple_repeat 1 43 0 4 838 207 88 0 0 chr17 33226157 33226191 -62046460 + (G)n Simple_repeat Simple_repeat 1 34 0 4 838 232 207 69 0 chr17 33226923 33226981 -62045670 - MTE2a LTR MaLR -43 336 275 4 838 374 323 77 18 chr17 33227000 33227170 -62045481 + MLT-int LTR MaLR 565 744 -991 4 838 399 278 27 36 chr17 33227227 33227339 -62045312 - PB1D10 SINE Alu -1 116 6 4 838 265 281 104 1 chr17 33227916 33228036 -62044615 + MER44D DNA MER2_type 31 163 -542 4 838 712 297 82 0 chr17 33228038 33228331 -62044320 + MER44D DNA MER2_type 375 691 -14 4 838 1878 276 169 21 chr17 33228525 33229187 -62043464 - Lx8 LINE L1 -179 7294 6535 4 838 451 209 0 0 chr17 33229207 33229293 -62043358 - Lx8 LINE L1 -1025 6448 6363 4 838 1055 194 14 28 chr17 33230438 33230655 -62041996 - B3 SINE B2 0 216 3 4 838 324 0 0 0 chr17 33230831 33230867 -62041784 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 838 180 0 0 0 chr17 33231061 33231081 -62041570 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 4 838 553 221 22 59 chr17 33231081 33231207 -62041444 - B1_Mur1 SINE Alu -9 140 17 4 838 696 259 0 40 chr17 33231400 33231577 -62041074 - B3 SINE B2 -11 205 36 4 838 245 172 16 0 chr17 33231590 33231654 -62040997 + CT-rich Low_complexity Low_complexity 1 65 0 4 838 824 97 0 8 chr17 33231654 33231779 -62040872 + (TTCTC)n Simple_repeat Simple_repeat 1 124 0 4 838 303 246 0 76 chr17 33231782 33231861 -62040790 - RSINE1 SINE B4 -88 77 5 4 838 1181 0 0 0 chr17 33232052 33232193 -62040458 + MTA_Mm LTR MaLR 1 141 -255 4 838 276 220 0 63 chr17 33232193 33232256 -62040395 + B1_Mur1 SINE Alu 79 137 -12 4 838 180 0 0 0 chr17 33232259 33232279 -62040372 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 4 838 1898 36 8 0 chr17 33232315 33232562 -62040089 + MTA_Mm LTR MaLR 148 396 0 4 838 351 336 0 0 chr17 33232854 33232979 -62039672 + B1F1 SINE Alu 14 138 -11 4 838 306 323 62 10 chr17 33233100 33233197 -62039454 - RSINE1 SINE B4 -61 104 3 4 838 304 271 100 22 chr17 33234012 33234242 -62038409 - L1MC LINE L1 -2537 3609 3362 4 838 774 250 179 7 chr17 33234312 33234614 -62038037 - ORR1E LTR MaLR 0 359 6 4 838 327 85 0 0 chr17 33234619 33234666 -62037985 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 838 252 0 0 0 chr17 33235116 33235144 -62037507 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 838 333 0 0 0 chr17 33235836 33235873 -62036778 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 4 838 24 0 0 0 chr17 33236507 33236531 -62036120 + AT_rich Low_complexity Low_complexity 1 24 0 5 838 363 207 24 35 chr17 33236564 33236649 -62036002 - RMER15 LTR ERVL 0 575 492 5 838 925 156 6 6 chr17 33237263 33237431 -62035220 - URR1A DNA MER1_type 0 226 59 5 838 234 91 0 0 chr17 33238183 33238216 -62034435 + (G)n Simple_repeat Simple_repeat 1 33 0 5 838 27 29 0 0 chr17 33238429 33238463 -62034188 + AT_rich Low_complexity Low_complexity 1 34 0 5 838 216 0 0 0 chr17 33238911 33238935 -62033716 + (A)n Simple_repeat Simple_repeat 1 24 0 5 838 762 240 67 25 chr17 33239125 33239364 -62033287 + MurSatRep1 Unknown Unknown 557 805 -1332 5 838 739 217 126 0 chr17 33239606 33239781 -62032870 + B3 SINE B2 6 202 -14 5 838 378 107 0 0 chr17 33239781 33239837 -62032814 + (TAGA)n Simple_repeat Simple_repeat 4 59 0 5 838 783 164 0 14 chr17 33240024 33240172 -62032479 + Lx4B LINE L1 6909 7054 -4 5 838 351 0 0 0 chr17 33240192 33240231 -62032420 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 838 235 196 0 42 chr17 33240272 33240320 -62032331 + B4A SINE B4 35 80 -212 5 838 370 312 12 100 chr17 33240345 33240505 -62032146 + B4A SINE B4 144 289 -3 5 838 445 319 13 13 chr17 33240515 33240674 -62031977 + RSINE1 SINE B4 1 159 -6 5 838 369 0 0 0 chr17 33240675 33240716 -62031935 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 838 186 43 0 0 chr17 33240862 33240885 -62031766 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 838 234 305 31 31 chr17 33241935 33242157 -62030494 + MMSAT4 Satellite Satellite 1 222 -23 5 838 317 351 30 27 chr17 33242111 33242266 -62030385 + MurSatRep1 Unknown Unknown 1744 1904 -233 5 838 363 306 35 35 chr17 33242266 33242493 -62030158 + MMSAT4 Satellite Satellite 1 227 0 5 838 317 351 30 27 chr17 33242493 33242716 -62029935 + MurSatRep1 Unknown Unknown 1905 2137 0 5 838 614 277 18 73 chr17 33243187 33243405 -62029246 + ERVL-B4-int LTR ERVL 4542 4747 -967 5 838 630 288 82 56 chr17 33243452 33243641 -62029010 + ERVL-B4-int LTR ERVL 4872 5050 -664 5 838 1303 212 91 86 chr17 33243641 33244058 -62028593 + MTD LTR MaLR 1 419 0 5 838 630 288 82 56 chr17 33244058 33244210 -62028441 + ERVL-B4-int LTR ERVL 5051 5222 -492 5 838 21 82 0 0 chr17 33244233 33244282 -62028369 + AT_rich Low_complexity Low_complexity 1 49 0 5 838 308 268 118 9 chr17 33244282 33244431 -62028220 + ERVL-B4-int LTR ERVL 5283 5485 -276 5 838 606 225 17 0 chr17 33244434 33244554 -62028097 + B1_Mur2 SINE Alu 2 123 -26 5 838 243 0 0 0 chr17 33244560 33244587 -62028064 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 838 1147 237 85 43 chr17 33244612 33244964 -62027687 + MTE2a LTR MaLR 10 376 -3 5 838 468 258 54 59 chr17 33244983 33245222 -62027429 + ERVL-B4-int LTR ERVL 5486 5723 -38 5 838 297 399 23 0 chr17 33245451 33245624 -62027027 + MT2A LTR ERVL 283 459 -74 5 838 234 0 0 0 chr17 33245775 33245801 -62026850 + (TTTTG)n Simple_repeat Simple_repeat 4 29 0 5 838 241 281 179 61 chr17 33245885 33246131 -62026520 - B4A SINE B4 -16 276 2 5 838 325 227 162 20 chr17 33246550 33246649 -62026002 + PB1D9 SINE Alu 1 113 -7 5 838 433 245 106 21 chr17 33247283 33247425 -62025226 - B3A SINE B2 -1 197 44 5 838 1278 20 0 0 chr17 33247747 33247893 -62024758 - B1_Mus2 SINE Alu 0 147 2 5 838 649 187 34 54 chr17 33248692 33248839 -62023812 - B1_Mur1 SINE Alu -1 148 5 5 838 239 193 0 78 chr17 33248918 33249008 -62023643 - Lx4B LINE L1 -4 7054 6972 5 838 303 109 0 0 chr17 33249477 33249523 -62023128 + RLTR12A LTR ERVK 1 46 -522 5 838 593 245 56 71 chr17 33249614 33249812 -62022839 + B3A SINE B2 1 195 -3 5 838 653 274 59 30 chr17 33249963 33250206 -62022445 + RMER1B Other Other 73 352 -714 5 838 281 100 0 20 chr17 33250206 33250257 -62022394 + RLTR12B LTR ERVK 1 50 -518 5 838 180 111 0 0 chr17 33250272 33250299 -62022352 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 5 838 5833 127 14 3 chr17 33250299 33251175 -62021476 - Lx4A LINE L1 -2 7056 6172 5 838 273 235 15 0 chr17 33251175 33251243 -62021408 + RLTR12B LTR ERVK 36 104 -464 5 838 225 0 0 0 chr17 33251243 33251268 -62021383 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 5 838 308 62 0 0 chr17 33251270 33251318 -62021333 - B1_Mus2 SINE Alu 0 147 100 5 838 693 306 85 38 chr17 33251318 33251804 -62020847 + RLTR12B LTR ERVK 102 561 -7 5 838 840 225 3 88 chr17 33251807 33252094 -62020557 + RMER1B Other Other 165 390 -676 5 838 613 271 44 6 chr17 33252430 33252590 -62020061 - MurSatRep1 Unknown Unknown -1392 745 580 5 838 229 299 60 0 chr17 33252640 33252707 -62019944 + ID4 SINE ID 2 72 -11 5 838 739 287 10 35 chr17 33252816 33253018 -62019633 - B3A SINE B2 -1 197 1 5 838 457 315 5 19 chr17 33253033 33253240 -62019411 + L1M2 LINE L1 4871 5074 -1069 5 838 285 266 270 31 chr17 33253268 33253313 -62019338 - B3A SINE B2 0 198 159 5 838 2662 118 10 13 chr17 33253313 33253708 -62018943 - ORR1B1 LTR MaLR 0 394 1 5 838 285 266 270 31 chr17 33253708 33253821 -62018830 - B3A SINE B2 -40 158 3 5 838 469 317 18 18 chr17 33253824 33254028 -62018623 + L1M2 LINE L1 5079 5284 -859 5 838 1119 96 0 0 chr17 33254028 33254174 -62018477 + B1_Mus1 SINE Alu 3 148 0 5 838 469 317 18 18 chr17 33254174 33254194 -62018457 + L1M2 LINE L1 5285 5303 -840 5 838 233 119 0 23 chr17 33254194 33254237 -62018414 + (GAAAA)n Simple_repeat Simple_repeat 2 43 0 5 838 1283 186 63 31 chr17 33254265 33254520 -62018131 + Lx8 LINE L1 7063 7325 -148 5 838 445 155 131 0 chr17 33254991 33255075 -62017576 - B1F2 SINE Alu -8 141 47 5 838 333 129 0 0 chr17 33255099 33255169 -62017482 + (T)n Simple_repeat Simple_repeat 1 70 0 5 838 1235 48 0 0 chr17 33255171 33255317 -62017334 - B1_Mm SINE Alu -1 146 1 5 838 245 349 0 0 chr17 33255344 33255407 -62017244 - PB1D9 SINE Alu -55 65 3 5 838 14646 91 11 4 chr17 33255440 33257464 -62015187 + L1_Mm LINE L1 3782 5818 -65 5 838 234 305 12 47 chr17 33257612 33257696 -62014955 + B3A SINE B2 4 84 -114 5 838 2593 173 35 107 chr17 33257696 33258388 -62014263 + RLTR26 LTR ERVK 1 642 0 5 838 1650 176 21 77 chr17 33258615 33258990 -62013661 - ORR1B1 LTR MaLR 0 394 41 5 838 406 101 48 40 chr17 33259003 33259127 -62013524 + (TATAA)n Simple_repeat Simple_repeat 1 125 0 5 838 663 303 0 12 chr17 33259626 33259793 -62012858 + RSINE1 SINE B4 1 165 0 5 838 820 282 30 5 chr17 33259943 33260146 -62012505 + ID_B1 SINE B4 4 211 -13 5 838 991 230 15 0 chr17 33260158 33260362 -62012289 + B3 SINE B2 1 207 -9 5 838 431 275 9 27 chr17 33260464 33260576 -62012075 + B3A SINE B2 8 117 -81 5 838 354 365 22 14 chr17 33261135 33261274 -62011377 + RSINE1 SINE B4 23 162 -3 5 838 23 0 0 0 chr17 33261282 33261305 -62011346 + AT_rich Low_complexity Low_complexity 1 23 0 5 838 226 309 83 0 chr17 33261315 33261399 -62011252 + PB1D7 SINE Alu 22 112 -8 5 838 522 0 0 0 chr17 33261458 33261516 -62011135 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 838 216 0 0 0 chr17 33261516 33261539 -62011112 + (GA)n Simple_repeat Simple_repeat 1 24 0 5 838 611 240 0 52 chr17 33261539 33261693 -62010958 - B1_Mur1 SINE Alu -3 146 1 5 838 359 232 12 0 chr17 33261693 33261773 -62010878 - ID_B1 SINE B4 -44 180 100 5 838 762 214 95 0 chr17 33261775 33261943 -62010708 + B3 SINE B2 3 186 -30 5 838 452 323 75 20 chr17 33262073 33262272 -62010379 - ID_B1 SINE B4 -8 216 7 5 838 401 169 26 0 chr17 33262724 33262801 -62009850 - B1F1 SINE Alu -27 122 44 5 838 430 173 248 16 chr17 33263461 33263590 -62009061 - B3 SINE B2 -57 159 1 5 838 261 0 0 0 chr17 33263855 33263884 -62008767 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 838 3738 165 41 16 chr17 33263901 33264579 -62008072 - Lx4A LINE L1 -3 7055 6361 5 838 513 47 0 0 chr17 33264580 33264644 -62008007 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 838 390 74 0 0 chr17 33264644 33264698 -62007953 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 838 33386 75 13 5 chr17 33264700 33269832 -62002819 + L1Md_F2 LINE L1 409 5585 -298 5 838 7655 58 21 4 chr17 33269833 33270811 -62001840 + L1Md_F2 LINE L1 5587 6581 -1 5 838 192 200 0 0 chr17 33270811 33270851 -62001800 + GA-rich Low_complexity Low_complexity 3 42 0 5 838 828 145 24 6 chr17 33270857 33271024 -62001627 + G-rich Low_complexity Low_complexity 6 175 0 5 838 279 333 16 105 chr17 33272176 33272218 -62000433 + B3A SINE B2 1 42 -156 5 838 1209 88 64 6 chr17 33272218 33272389 -62000262 + B2_Mm2 SINE B2 1 181 -14 5 838 279 333 16 105 chr17 33272389 33272470 -62000181 + B3A SINE B2 43 113 -85 5 838 23 33 0 0 chr17 33272528 33272558 -62000093 + AT_rich Low_complexity Low_complexity 1 30 0 5 838 198 0 0 0 chr17 33276003 33276025 -61996626 + (T)n Simple_repeat Simple_repeat 1 22 0 5 838 617 227 65 7 chr17 33276920 33277075 -61995576 - B3A SINE B2 -34 164 1 5 838 214 286 82 12 chr17 33277195 33277280 -61995371 + PB1D7 SINE Alu 18 108 -12 5 838 244 250 302 0 chr17 33277490 33277606 -61995045 + RMER21B LTR ERV1 415 565 -277 5 838 205 194 0 0 chr17 33277754 33277790 -61994861 + CT-rich Low_complexity Low_complexity 1 36 0 5 838 939 67 97 0 chr17 33277802 33277936 -61994715 - B1_Mm SINE Alu 0 147 1 5 838 489 127 0 0 chr17 33277950 33278029 -61994622 + (TCC)n Simple_repeat Simple_repeat 3 81 0 5 838 2076 174 32 25 chr17 33278501 33278903 -61993748 - RMER15 LTR ERVL -168 407 3 5 838 294 268 50 20 chr17 33278903 33279002 -61993649 + B1F SINE Alu 48 149 0 5 838 393 267 65 41 chr17 33279003 33279126 -61993525 + ID_B1 SINE B4 81 214 -10 5 838 333 0 0 0 chr17 33279126 33279163 -61993488 + (CCAA)n Simple_repeat Simple_repeat 2 38 0 5 838 234 302 131 9 chr17 33279222 33279329 -61993322 + PB1 SINE Alu 1 120 -7 5 838 357 230 103 0 chr17 33279425 33279512 -61993139 + RMER15 LTR ERVL 468 563 -12 5 838 257 265 73 0 chr17 33279885 33279953 -61992698 - ID4 SINE ID -10 73 1 5 838 318 383 93 0 chr17 33280212 33280426 -61992225 - MER68 LTR ERVL -165 398 165 5 838 414 320 76 22 chr17 33280794 33280979 -61991672 + B3A SINE B2 1 195 -3 5 838 696 194 75 0 chr17 33280998 33281019 -61991632 - B1_Mur4 SINE Alu -1 149 129 6 838 485 16 16 0 chr17 33281019 33281081 -61991570 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 838 696 194 75 0 chr17 33281081 33281193 -61991458 - B1_Mur4 SINE Alu -22 128 7 6 838 564 254 28 0 chr17 33281399 33281576 -61991075 + MurSatRep1 Unknown Unknown 564 745 -1392 6 838 3101 49 13 3 chr17 33281776 33282201 -61990450 - L1Md_F2 LINE L1 0 6582 6173 6 838 279 228 33 0 chr17 33282445 33282537 -61990114 + (TTTA)n Simple_repeat Simple_repeat 4 98 0 6 838 898 120 8 0 chr17 33282537 33282670 -61989981 - B1_Mus1 SINE Alu -5 143 10 6 838 573 350 32 16 chr17 33282751 33282940 -61989711 - B3A SINE B2 -5 193 2 6 838 369 0 0 0 chr17 33282940 33282981 -61989670 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 6 838 220 351 42 42 chr17 33282988 33283107 -61989544 - B1_Mus1 SINE Alu -22 126 8 6 838 366 273 20 20 chr17 33283985 33284131 -61988520 + MMSAT4 Satellite Satellite 23 168 0 6 838 251 319 29 29 chr17 33284023 33284162 -61988489 + MurSatRep1 Unknown Unknown 1852 1990 -147 6 838 287 353 24 27 chr17 33284174 33284549 -61988102 + MurSatRep1 Unknown Unknown 1758 2068 -69 6 838 259 289 39 45 chr17 33284743 33284899 -61987752 + MurSatRep1 Unknown Unknown 1748 1902 -235 6 838 3203 283 132 73 chr17 33285256 33286664 -61985987 + MTEb-int LTR MaLR 88 1578 -2 6 838 636 305 36 32 chr17 33286668 33286975 -61985676 + MTEb LTR MaLR 2 365 -14 6 838 8480 101 24 1 chr17 33287381 33288745 -61983906 + MusHAL1 LINE L1 881 2274 -438 6 104 30844 74 2 0 chr17 33288749 33293946 -61978705 + L1Md_F2 LINE L1 382 5586 -297 6 839 7283 57 43 19 chr17 33293946 33294917 -61977734 + L1Md_F2 LINE L1 5587 6581 -1 6 839 264 77 0 0 chr17 33294920 33294959 -61977692 + (CCCA)n Simple_repeat Simple_repeat 1 39 0 6 839 12161 164 9 2 chr17 33294962 33297943 -61974708 + Lx2 LINE L1 3483 6479 -518 6 839 10113 91 11 0 chr17 33297944 33300183 -61972468 - L1_Mus1 LINE L1 0 6567 4301 6 839 5507 141 23 39 chr17 33300475 33302016 -61970635 + L1VL4 LINE L1 648 2141 -3742 6 839 995 72 0 0 chr17 33302018 33302199 -61970452 + L1_Mus1 LINE L1 6404 6567 0 6 839 352 244 24 0 chr17 33302262 33302344 -61970307 + MTD LTR MaLR 10 93 -326 6 839 4076 54 48 6 chr17 33302374 33302912 -61969739 - L1Md_F2 LINE L1 -13 6569 6009 6 839 1533 262 63 12 chr17 33303056 33303551 -61969100 - Lx7 LINE L1 -358 7338 6819 6 839 441 250 183 0 chr17 33303887 33303991 -61968660 + RSINE1 SINE B4 19 141 -24 6 839 396 0 0 0 chr17 33303992 33304036 -61968615 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 839 583 279 131 6 chr17 33304048 33304376 -61968275 + L1MB5 LINE L1 5685 6053 -121 6 839 645 298 25 30 chr17 33304381 33304578 -61968073 - B3A SINE B2 -1 197 2 6 839 1153 75 0 0 chr17 33304639 33304786 -61967865 + B1_Mus2 SINE Alu 1 147 0 6 839 207 0 0 0 chr17 33304789 33304812 -61967839 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 839 356 275 84 55 chr17 33306422 33306730 -61965921 + L1MA7 LINE L1 5972 6288 -3 6 839 420 20 0 0 chr17 33306927 33306976 -61965675 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 839 393 110 0 0 chr17 33306976 33307048 -61965603 + (TG)n Simple_repeat Simple_repeat 2 74 0 6 839 497 275 28 19 chr17 33307059 33307274 -61965377 - L1MC1 LINE L1 -188 6145 5929 6 839 1269 96 6 0 chr17 33307891 33308069 -61964582 - B2_Mm1t SINE B2 -7 186 8 6 839 456 291 68 11 chr17 33308273 33308450 -61964201 + MER20 DNA MER1_type 33 219 0 6 839 444 295 71 55 chr17 33308796 33308974 -61963677 + B3A SINE B2 1 181 -17 6 839 633 27 0 0 chr17 33308974 33309049 -61963602 + (GA)n Simple_repeat Simple_repeat 2 76 0 6 839 258 32 0 0 chr17 33309372 33309403 -61963248 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 839 676 183 9 0 chr17 33309450 33309565 -61963086 - B3 SINE B2 -2 214 99 6 839 6428 180 24 5 chr17 33309608 33311409 -61961242 - Lx5 LINE L1 -124 6926 5082 6 839 252 266 27 127 chr17 33311457 33311677 -61960974 + L1MA7 LINE L1 5985 6182 -109 6 839 283 346 167 47 chr17 33311786 33312001 -61960650 + B4A SINE B4 51 291 -1 6 839 186 71 0 0 chr17 33312131 33312159 -61960492 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 839 457 241 7 20 chr17 33312216 33312364 -61960287 + Lx7 LINE L1 5662 5807 -1889 6 839 335 388 64 6 chr17 33312678 33312849 -61959802 - L1MB5 LINE L1 -50 6124 5944 6 839 596 336 27 27 chr17 33312967 33313187 -61959464 + B4A SINE B4 3 222 -70 6 839 558 182 0 0 chr17 33314756 33314866 -61957785 + (TA)n Simple_repeat Simple_repeat 2 111 0 6 839 1175 166 10 5 chr17 33314879 33315073 -61957578 + RLTR25B LTR ERVK 834 1028 0 6 839 769 189 14 0 chr17 33315083 33315226 -61957425 + B1_Mur4 SINE Alu 1 145 -5 6 839 656 283 10 62 chr17 33315341 33315533 -61957118 + B4A SINE B4 5 186 -106 6 839 222 337 0 29 chr17 33315534 33315638 -61957013 + B3A SINE B2 3 103 -95 6 839 627 262 28 133 chr17 33315546 33315801 -61956850 + B4A SINE B4 15 242 -50 6 839 231 333 18 0 chr17 33315805 33315916 -61956735 + GA-rich Low_complexity Low_complexity 3 115 0 6 839 211 205 0 0 chr17 33317003 33317042 -61955609 + CT-rich Low_complexity Low_complexity 3 41 0 6 839 862 272 133 11 chr17 33317073 33317434 -61955217 - Lx8 LINE L1 -326 7147 6743 6 839 812 75 20 26 chr17 33318290 33318441 -61954210 + (TTCTC)n Simple_repeat Simple_repeat 5 154 0 6 839 714 82 0 0 chr17 33318442 33318540 -61954111 + (TCCC)n Simple_repeat Simple_repeat 3 100 0 6 839 1852 264 58 22 chr17 33318550 33318938 -61953713 - Lx5 LINE L1 -16 7034 6631 6 839 279 0 0 0 chr17 33318938 33318969 -61953682 + (TTG)n Simple_repeat Simple_repeat 3 33 0 6 839 1852 264 58 22 chr17 33318969 33319084 -61953567 - Lx5 LINE L1 -420 6630 6513 6 839 987 249 99 26 chr17 33319099 33319371 -61953280 - RMER13B LTR ERVK 0 908 617 6 839 376 232 11 15 chr17 33319372 33319459 -61953192 - RMER13B LTR ERVK -876 82 3 6 839 993 140 0 0 chr17 33319509 33319673 -61952978 + (TTC)n Simple_repeat Simple_repeat 2 165 0 6 839 244 241 0 21 chr17 33319694 33319838 -61952813 + CT-rich Low_complexity Low_complexity 1 141 0 6 839 656 243 41 37 chr17 33319838 33320056 -61952595 - Lx6 LINE L1 -705 6755 6537 6 839 216 111 83 0 chr17 33320624 33320660 -61951991 + L2a LINE L2 3382 3420 -6 6 839 10482 89 6 0 chr17 33320665 33322861 -61949790 - L1_Mus1 LINE L1 -56 6511 4301 6 839 5455 136 24 57 chr17 33323153 33324693 -61947958 + L1VL4 LINE L1 432 1923 -1775 6 839 1008 65 0 0 chr17 33324695 33324868 -61947783 + L1_Mus1 LINE L1 6404 6567 0 6 839 352 244 24 0 chr17 33324931 33325013 -61947638 + MTD LTR MaLR 10 93 -326 6 839 4056 54 48 9 chr17 33325040 33325581 -61947070 - L1Md_F2 LINE L1 -12 6570 6009 6 839 240 287 49 10 chr17 33325585 33325687 -61946964 - Lx7 LINE L1 -13 7683 7578 6 839 207 0 0 0 chr17 33325727 33325750 -61946901 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 6 839 1437 269 53 11 chr17 33325756 33326229 -61946422 - Lx7 LINE L1 -385 7311 6819 6 839 441 250 183 0 chr17 33326565 33326669 -61945982 + RSINE1 SINE B4 19 141 -24 6 839 324 0 0 0 chr17 33326672 33326708 -61945943 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 839 571 279 131 6 chr17 33326720 33327048 -61945603 + L1MB5 LINE L1 5685 6053 -121 6 839 655 293 25 30 chr17 33327053 33327250 -61945401 - B3A SINE B2 -1 197 2 6 839 1163 75 0 0 chr17 33327311 33327458 -61945193 + B1_Mus2 SINE Alu 1 147 0 6 839 288 77 0 0 chr17 33327692 33327731 -61944920 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 839 231 282 155 0 chr17 33328910 33328981 -61943670 + MER20 DNA MER1_type 4 85 -134 6 839 360 282 84 55 chr17 33329107 33329415 -61943236 + L1MA7 LINE L1 5972 6288 -3 6 839 243 0 0 0 chr17 33329612 33329639 -61943012 + (TC)n Simple_repeat Simple_repeat 2 28 0 6 839 222 167 0 0 chr17 33329639 33329699 -61942952 + (TG)n Simple_repeat Simple_repeat 2 61 0 6 839 478 280 28 19 chr17 33329710 33329925 -61942726 - L1MC1 LINE L1 -188 6145 5929 6 839 1302 90 6 0 chr17 33330543 33330721 -61941930 - B2_Mm1t SINE B2 -7 186 8 6 839 405 324 62 6 chr17 33330925 33331102 -61941549 + MER20 DNA MER1_type 33 219 0 6 839 403 301 71 60 chr17 33331448 33331624 -61941027 + B3A SINE B2 1 179 -19 6 839 510 17 0 0 chr17 33331624 33331683 -61940968 + (GA)n Simple_repeat Simple_repeat 2 60 0 6 839 288 77 0 0 chr17 33332006 33332045 -61940606 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 839 676 183 9 0 chr17 33332093 33332208 -61940443 - B3 SINE B2 -2 214 99 6 839 6344 181 24 5 chr17 33332251 33334052 -61938599 - Lx5 LINE L1 -124 6926 5082 6 839 268 241 32 136 chr17 33334100 33334321 -61938330 + L1MA7 LINE L1 5985 6182 -109 6 839 280 345 169 47 chr17 33334432 33334645 -61938006 + B4A SINE B4 51 289 -3 6 839 201 39 0 0 chr17 33334777 33334803 -61937848 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 839 446 248 7 20 chr17 33334863 33335011 -61937640 + Lx7 LINE L1 5662 5807 -1889 6 839 335 388 64 6 chr17 33335325 33335496 -61937155 - L1MB5 LINE L1 -50 6124 5944 6 839 607 336 27 27 chr17 33335613 33335833 -61936818 + B4A SINE B4 3 222 -70 6 839 642 191 0 0 chr17 33337416 33337547 -61935104 + (TA)n Simple_repeat Simple_repeat 1 131 0 6 839 207 0 0 0 chr17 33337547 33337570 -61935081 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 839 1146 168 11 5 chr17 33337570 33337761 -61934890 + RLTR25B LTR ERVK 837 1028 0 6 839 838 168 14 0 chr17 33337771 33337914 -61934737 + B1_Mur4 SINE Alu 1 145 -5 6 839 646 283 10 72 chr17 33338029 33338223 -61934428 + B4A SINE B4 5 186 -106 6 839 245 327 0 29 chr17 33338224 33338328 -61934323 + B3A SINE B2 3 103 -95 7 839 646 258 28 133 chr17 33338236 33338491 -61934160 + B4A SINE B4 15 242 -50 7 839 245 324 18 0 chr17 33338495 33338606 -61934045 + GA-rich Low_complexity Low_complexity 3 115 0 7 839 869 266 133 11 chr17 33339764 33340125 -61932526 - Lx8 LINE L1 -326 7147 6743 7 839 3975 70 2 11 chr17 33340173 33340705 -61931946 - L1Md_F2 LINE L1 -2 6580 6054 7 839 607 25 12 12 chr17 33341542 33341624 -61931027 + (TC)n Simple_repeat Simple_repeat 2 83 0 7 839 1830 260 46 42 chr17 33341629 33342148 -61930503 - Lx5 LINE L1 -17 7033 6513 7 839 3859 191 53 38 chr17 33342190 33343043 -61929608 - RMER13B LTR ERVK -42 866 1 7 839 512 190 6 22 chr17 33343102 33343129 -61929522 + polypyrimidine Low_complexity Low_complexity 154 180 0 7 839 1305 83 0 0 chr17 33343129 33343309 -61929342 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 7 839 512 190 6 22 chr17 33343309 33343464 -61929187 + CT-rich Low_complexity Low_complexity 2 153 0 7 839 709 232 41 36 chr17 33343544 33343763 -61928888 - Lx6 LINE L1 -705 6755 6536 7 839 216 111 83 0 chr17 33344335 33344371 -61928280 + L2a LINE L2 3382 3420 -6 7 839 2976 51 59 3 chr17 33344452 33344827 -61927824 - MTA_Mm LTR MaLR 0 396 1 7 839 1209 132 5 5 chr17 33344920 33345110 -61927541 + B2_Mm2 SINE B2 2 191 -4 7 839 199 319 76 11 chr17 33345111 33345203 -61927448 + MIRb SINE MIR 160 257 -11 7 839 230 404 17 34 chr17 33345699 33345817 -61926834 + MER20 DNA MER1_type 46 161 -58 7 839 790 277 21 16 chr17 33345958 33346107 -61926544 + B3A SINE B2 2 153 -45 7 839 368 65 52 0 chr17 33346107 33346184 -61926467 + (CA)n Simple_repeat Simple_repeat 2 82 0 7 839 790 277 21 16 chr17 33346184 33346225 -61926426 + B3A SINE B2 154 193 -5 7 839 399 21 0 0 chr17 33346279 33346327 -61926324 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 839 327 176 11 21 chr17 33346331 33346424 -61926227 + (TA)n Simple_repeat Simple_repeat 2 93 0 7 839 672 333 50 32 chr17 33346512 33346598 -61926053 + MER2 DNA MER2_type 2 88 -257 7 839 521 275 105 20 chr17 33346598 33346750 -61925901 - RSINE1 SINE B4 0 165 1 7 839 672 333 50 32 chr17 33346750 33347001 -61925650 + MER2 DNA MER2_type 89 345 0 7 839 242 348 174 29 chr17 33347004 33347285 -61925366 - L2a LINE L2 -153 3273 2952 7 839 513 0 0 0 chr17 33347332 33347389 -61925262 + (GGA)n Simple_repeat Simple_repeat 2 58 0 7 839 467 343 15 15 chr17 33348238 33348374 -61924277 - ID_B1 SINE B4 -7 217 82 7 839 263 186 45 23 chr17 33348373 33348461 -61924190 + MER96B DNA hAT 118 207 -210 7 839 372 43 0 0 chr17 33348575 33348621 -61924030 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 839 446 323 39 0 chr17 33348625 33348755 -61923896 - RSINE1 SINE B4 -28 137 3 7 839 699 241 0 0 chr17 33348860 33348997 -61923654 + B1_Mus2 SINE Alu 1 137 -10 7 839 216 0 0 0 chr17 33348997 33349021 -61923630 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 7 839 479 291 84 14 chr17 33349320 33349463 -61923188 - RSINE1 SINE B4 -10 155 3 7 839 22 0 0 0 chr17 33349673 33349695 -61922956 + AT_rich Low_complexity Low_complexity 1 22 0 7 839 203 320 28 83 chr17 33350112 33350221 -61922430 + MIR SINE MIR 70 172 -90 7 839 348 272 99 33 chr17 33350347 33350499 -61922152 + RSINE1 SINE B4 2 163 -2 7 839 1141 303 63 19 chr17 33350552 33350735 -61921916 + L1MB7 LINE L1 5458 5639 -545 7 839 474 75 0 0 chr17 33350735 33350802 -61921849 + (CA)n Simple_repeat Simple_repeat 2 68 0 7 839 1141 303 63 19 chr17 33350802 33351143 -61921508 + L1MB7 LINE L1 5640 6005 -179 7 839 985 256 50 14 chr17 33351166 33351388 -61921263 + B4 SINE B4 3 232 -60 7 839 835 167 21 0 chr17 33351392 33351536 -61921115 + B1_Mus1 SINE Alu 2 148 0 7 839 328 187 56 16 chr17 33351549 33351674 -61920977 + GA-rich Low_complexity Low_complexity 4 133 0 7 839 1322 47 0 6 chr17 33351677 33351848 -61920803 + (GGAGAA)n Simple_repeat Simple_repeat 1 170 0 7 839 411 310 53 0 chr17 33351932 33352045 -61920606 - B1F SINE Alu -7 142 24 7 839 395 353 22 22 chr17 33352045 33352071 -61920580 - ID_B1 SINE B4 -7 217 79 7 839 183 222 0 0 chr17 33352202 33352247 -61920404 + GA-rich Low_complexity Low_complexity 1 45 0 7 839 483 18 0 0 chr17 33353344 33353400 -61919251 + (TG)n Simple_repeat Simple_repeat 2 57 0 7 839 472 287 82 13 chr17 33353461 33353620 -61919031 - MER2 DNA MER2_type -57 288 119 7 839 315 293 12 24 chr17 33353622 33353706 -61918945 + B4 SINE B4 5 87 -205 7 839 450 0 0 0 chr17 33353720 33353770 -61918881 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 839 540 373 0 33 chr17 33353791 33353974 -61918677 + B4 SINE B4 90 266 -26 7 839 369 0 0 0 chr17 33353975 33354016 -61918635 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 839 340 372 11 0 chr17 33354018 33354112 -61918539 - B3A SINE B2 -48 150 56 7 839 261 260 60 40 chr17 33354108 33354208 -61918443 + B4A SINE B4 190 291 -1 7 839 423 267 108 22 chr17 33354433 33354595 -61918056 + B3A SINE B2 45 198 0 7 839 543 261 12 53 chr17 33355239 33355409 -61917242 + RSINE1 SINE B4 3 165 0 7 839 276 311 54 0 chr17 33355589 33355663 -61916988 + RSINE1 SINE B4 88 165 0 7 839 558 63 0 0 chr17 33355680 33355759 -61916892 + (CA)n Simple_repeat Simple_repeat 2 80 0 7 839 26 30 0 0 chr17 33356186 33356219 -61916432 + AT_rich Low_complexity Low_complexity 1 33 0 7 839 2891 61 37 0 chr17 33357061 33357440 -61915211 + L1_Mus1 LINE L1 6175 6567 0 7 839 304 258 63 111 chr17 33357622 33357795 -61914856 + MLT1D LTR MaLR 6 193 -312 7 839 667 312 24 30 chr17 33357795 33357960 -61914691 + RSINE1 SINE B4 2 165 0 7 839 415 314 30 129 chr17 33357985 33358209 -61914442 + MLT1D LTR MaLR 176 491 -14 7 839 234 0 0 0 chr17 33358215 33358241 -61914410 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 839 437 34 17 0 chr17 33358803 33358862 -61913789 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 7 839 293 319 0 53 chr17 33358886 33359038 -61913613 + T-rich Low_complexity Low_complexity 4 147 0 7 839 305 366 45 19 chr17 33359090 33359246 -61913405 + B4A SINE B4 5 164 -128 7 839 191 157 20 0 chr17 33359347 33359398 -61913253 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 839 666 292 24 38 chr17 33359635 33359845 -61912806 - B3 SINE B2 -6 210 4 7 839 253 291 12 25 chr17 33360107 33360188 -61912463 - B4A SINE B4 -211 81 2 7 839 7138 100 105 7 chr17 33360321 33362255 -61910396 + L1VL2 LINE L1 74 2218 -1397 7 839 5628 118 20 9 chr17 33362255 33363846 -61908805 + L1VL2 LINE L1 63 1672 -1943 7 839 3001 120 32 2 chr17 33363843 33364312 -61908339 + L1_Mm LINE L1 5360 5842 -41 7 839 354 136 17 0 chr17 33364297 33364356 -61908295 + L1_Mur3 LINE L1 4471 4530 -1350 7 839 31001 79 3 7 chr17 33364388 33369684 -61902967 - L1Md_F LINE L1 -260 5623 350 7 839 8744 104 32 1 chr17 33369666 33371654 -61900997 - L1VL4 LINE L1 -1303 2256 213 7 839 268 299 0 0 chr17 33372058 33372125 -61900526 + RLTR24 LTR ERV1 5 71 -458 7 839 386 296 72 32 chr17 33372610 33373049 -61899602 + L1_Mur3 LINE L1 3133 3570 -2310 7 839 491 312 125 29 chr17 33373111 33373327 -61899324 + L1M2 LINE L1 4446 4698 -1445 7 839 414 0 0 0 chr17 33373327 33373373 -61899278 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 7 839 491 302 107 30 chr17 33373373 33373937 -61898714 + L1M2 LINE L1 4699 5287 -856 7 839 504 285 24 0 chr17 33374754 33374877 -61897774 + B1_Mur1 SINE Alu 2 127 -22 7 839 219 163 23 0 chr17 33374902 33374945 -61897706 + G-rich Low_complexity Low_complexity 1 44 0 7 839 1272 227 270 0 chr17 33374945 33375412 -61897239 + Lx6 LINE L1 6858 7450 -10 7 839 310 259 176 0 chr17 33375813 33375898 -61896753 - B1_Mus2 SINE Alu -46 101 2 7 839 22 35 0 0 chr17 33375975 33376004 -61896647 + AT_rich Low_complexity Low_complexity 1 29 0 7 839 349 358 0 9 chr17 33376060 33376170 -61896481 - B3A SINE B2 -86 112 4 7 839 957 42 0 0 chr17 33376305 33376423 -61896228 + (TC)n Simple_repeat Simple_repeat 1 118 0 7 839 198 0 0 0 chr17 33376423 33376444 -61896207 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 839 301 289 16 32 chr17 33376482 33376498 -61896153 + ID_B1 SINE B4 75 197 -27 7 839 520 202 18 0 chr17 33376498 33376607 -61896044 + B1_Mur3 SINE Alu 9 119 -30 7 839 219 36 0 0 chr17 33376616 33376644 -61896007 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 7 839 303 229 175 10 chr17 33377437 33377534 -61895117 - PB1D9 SINE Alu -5 115 3 7 839 678 271 54 22 chr17 33377773 33377958 -61894693 - B3A SINE B2 -7 191 1 7 839 379 326 42 7 chr17 33378057 33378199 -61894452 + RSINE1 SINE B4 5 151 -14 7 839 243 356 9 38 chr17 33378371 33378584 -61894067 - MurSatRep1 Unknown Unknown -184 1953 1747 7 839 23 0 0 0 chr17 33380884 33380907 -61891744 + AT_rich Low_complexity Low_complexity 1 23 0 7 839 661 204 0 13 chr17 33380942 33381091 -61891560 - MurSatRep1 Unknown Unknown -1389 748 602 7 839 3927 122 30 9 chr17 33382246 33382877 -61889774 + Lx2 LINE L1 6353 6996 -1 7 839 2059 207 175 17 chr17 33383019 33383828 -61888823 + Lx6 LINE L1 5300 6236 -1224 7 839 249 193 17 34 chr17 33383816 33383875 -61888776 + Lx6 LINE L1 6524 6581 -879 7 839 1562 309 36 29 chr17 33383872 33384422 -61888229 + Lx5 LINE L1 6479 7032 -18 7 839 513 88 0 0 chr17 33384434 33384514 -61888137 + (GAAA)n Simple_repeat Simple_repeat 2 81 0 7 839 3099 32 45 0 chr17 33384607 33384986 -61887665 + MTA_Mm LTR MaLR 1 396 0 7 839 180 0 0 0 chr17 33386376 33386396 -61886255 + (A)n Simple_repeat Simple_repeat 1 20 0 7 839 1181 29 0 0 chr17 33386399 33386538 -61886113 + B1_Mus2 SINE Alu 1 139 -8 7 839 324 289 178 34 chr17 33387175 33387293 -61885358 + ID_B1 SINE B4 81 215 -9 8 839 498 206 0 86 chr17 33387187 33387304 -61885347 + PB1D9 SINE Alu 12 118 -2 8 839 637 190 112 140 chr17 33388451 33388665 -61883986 + RMER5 LTR ERV1 1 208 -326 8 839 624 236 67 28 chr17 33388664 33388843 -61883808 + RMER5 LTR ERV1 339 524 -10 8 839 445 224 47 87 chr17 33389355 33389482 -61883169 - B1_Mur1 SINE Alu -1 148 27 8 839 393 58 0 0 chr17 33389532 33389584 -61883067 + (CA)n Simple_repeat Simple_repeat 1 52 0 8 839 343 351 83 8 chr17 33389586 33389718 -61882933 + RSINE1 SINE B4 2 143 -22 8 839 379 234 58 76 chr17 33389741 33389912 -61882739 + BLACKJACK DNA AcHobo 2546 2713 -231 8 839 1822 214 118 20 chr17 33390000 33390509 -61882142 + Lx8 LINE L1 6310 6868 -605 8 839 1924 140 64 32 chr17 33390510 33390916 -61881735 + RMER10A LTR ERVL 18 436 -6 8 839 1021 225 15 34 chr17 33390932 33391199 -61881452 + Lx8 LINE L1 6850 7111 -362 8 839 400 35 17 17 chr17 33391361 33391420 -61881231 + (TAA)n Simple_repeat Simple_repeat 2 60 0 8 839 252 0 0 0 chr17 33393570 33393598 -61879053 + (TG)n Simple_repeat Simple_repeat 1 28 0 8 839 321 302 58 72 chr17 33393618 33393757 -61878894 - B1F2 SINE Alu -11 138 2 8 839 321 280 27 0 chr17 33393784 33393859 -61878792 + RSINE1 SINE B4 88 164 -1 8 839 183 42 0 0 chr17 33393959 33393983 -61878668 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 8 839 3166 39 39 0 chr17 33394122 33394503 -61878148 + MTA_Mm LTR MaLR 1 396 0 8 839 35 41 0 0 chr17 33394843 33394892 -61877759 + AT_rich Low_complexity Low_complexity 1 49 0 8 839 680 245 174 16 chr17 33395907 33396160 -61876491 - RMER21B LTR ERV1 -275 567 275 8 839 599 135 7 89 chr17 33396355 33396501 -61876150 + Lx3C LINE L1 6816 6949 -27 8 839 1450 73 10 10 chr17 33397261 33397454 -61875197 + B2_Mm2 SINE B2 3 195 0 8 839 1681 208 40 0 chr17 33398211 33398538 -61874113 + ORR1C1 LTR MaLR 1 340 -38 8 839 422 259 48 147 chr17 33398581 33398956 -61873695 - RLTR21 LTR ERVK -252 1320 983 8 839 1753 244 66 133 chr17 33399110 33399421 -61873230 + Lx9 LINE L1 5040 5371 -476 8 839 221 57 0 28 chr17 33399421 33399457 -61873194 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 8 839 626 82 0 0 chr17 33399457 33399549 -61873102 - B1_Mm SINE Alu -2 147 56 8 839 1753 252 71 103 chr17 33399549 33400232 -61872419 + Lx9 LINE L1 5372 6111 -1533 8 839 856 255 27 12 chr17 33400320 33400578 -61872073 + Lx9 LINE L1 7094 7355 -289 8 839 311 203 134 8 chr17 33400664 33400783 -61871868 + Lx9 LINE L1 7511 7644 0 8 839 21 0 0 0 chr17 33400923 33400944 -61871707 + AT_rich Low_complexity Low_complexity 1 21 0 8 839 21 36 0 0 chr17 33401019 33401047 -61871604 + AT_rich Low_complexity Low_complexity 1 28 0 8 839 239 224 0 0 chr17 33401955 33402004 -61870647 + (CAGAGA)n Simple_repeat Simple_repeat 2 50 0 8 839 520 244 31 0 chr17 33402004 33402131 -61870520 + MER20 DNA MER1_type 89 219 0 8 839 22 0 0 0 chr17 33402499 33402521 -61870130 + AT_rich Low_complexity Low_complexity 1 22 0 8 839 211 281 0 0 chr17 33402539 33402596 -61870055 + (TG)n Simple_repeat Simple_repeat 1 57 0 8 839 302 309 103 71 chr17 33403122 33403432 -61869219 + Lx8 LINE L1 7154 7473 0 8 839 29 84 0 0 chr17 33403432 33403503 -61869148 + AT_rich Low_complexity Low_complexity 1 71 0 8 839 198 71 0 0 chr17 33403973 33404001 -61868650 + (TG)n Simple_repeat Simple_repeat 1 28 0 8 839 225 83 0 0 chr17 33404175 33404211 -61868440 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 8 839 590 131 215 0 chr17 33404211 33404318 -61868333 - B1_Mus1 SINE Alu -13 135 6 8 839 183 42 0 0 chr17 33405017 33405041 -61867610 + (TG)n Simple_repeat Simple_repeat 1 24 0 8 839 681 241 57 0 chr17 33405044 33405185 -61867466 - B3A SINE B2 -45 153 5 8 839 746 207 0 14 chr17 33405245 33405392 -61867259 - B1_Mus2 SINE Alu -1 146 2 8 839 27 0 0 0 chr17 33406985 33407012 -61865639 + AT_rich Low_complexity Low_complexity 1 27 0 8 839 385 383 31 16 chr17 33407262 33407453 -61865198 - MLT1A0 LTR MaLR -30 335 142 8 839 22 56 0 0 chr17 33407649 33407685 -61864966 + AT_rich Low_complexity Low_complexity 1 36 0 8 839 339 402 5 15 chr17 33407792 33407989 -61864662 - Lx8 LINE L1 -138 7335 7141 8 839 1973 183 147 25 chr17 33408200 33408277 -61864374 - RLTR20A LTR ERVK 0 541 437 8 839 378 0 0 0 chr17 33408277 33408319 -61864332 + (CA)n Simple_repeat Simple_repeat 2 43 0 8 839 1973 183 147 25 chr17 33408319 33408717 -61863934 - RLTR20A LTR ERVK -105 436 9 8 839 1612 137 4 15 chr17 33408731 33409005 -61863646 - Lx LINE L1 -7 6647 6377 8 839 3946 158 51 1 chr17 33409018 33409759 -61862892 - L1_Mm LINE L1 -3 5880 5103 8 839 314 223 277 45 chr17 33409759 33409914 -61862737 - B2_Mm1a SINE B2 -2 191 1 8 839 1177 136 11 0 chr17 33409919 33410096 -61862555 - B2_Mm1t SINE B2 -14 179 1 8 839 1490 17 79 0 chr17 33410111 33410128 -61862523 - B2_Mm1a SINE B2 -1 192 176 8 839 207 0 0 0 chr17 33410128 33410151 -61862500 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 8 839 1490 17 79 0 chr17 33410151 33410311 -61862340 - B2_Mm1a SINE B2 -18 175 2 8 839 1485 141 0 0 chr17 33410311 33410560 -61862091 - L1_Mm LINE L1 -772 5111 4863 8 839 2679 248 5 14 chr17 33410567 33411307 -61861344 + L1VL4 LINE L1 139 829 -5473 8 839 1758 253 70 103 chr17 33411375 33412073 -61860578 - Lx9 LINE L1 -1522 6122 5372 8 839 626 82 0 0 chr17 33412073 33412165 -61860486 + B1_Mm SINE Alu 56 147 -2 8 839 221 57 0 28 chr17 33412165 33412201 -61860450 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 8 839 1758 243 67 134 chr17 33412201 33412512 -61860139 - Lx9 LINE L1 -476 5371 5040 8 839 434 265 37 136 chr17 33412665 33413040 -61859611 + RLTR21 LTR ERVK 983 1320 -252 8 839 1649 208 40 6 chr17 33413083 33413412 -61859239 - ORR1C1 LTR MaLR -38 340 1 8 839 1450 73 10 10 chr17 33414169 33414362 -61858289 - B2_Mm2 SINE B2 0 195 3 8 839 599 135 7 89 chr17 33415122 33415268 -61857383 - Lx3C LINE L1 -27 6949 6816 8 839 393 220 91 25 chr17 33415463 33415584 -61857067 + RMER21B LTR ERV1 275 403 -439 8 839 33814 35 1 0 chr17 33415584 33421450 -61851201 + L1Md_T LINE L1 1 5589 -297 8 839 8978 5 0 4 chr17 33421450 33422448 -61850203 + L1Md_T LINE L1 5590 6583 -2 8 839 270 0 0 0 chr17 33422488 33422518 -61850133 + (A)n Simple_repeat Simple_repeat 1 30 0 8 839 389 250 221 7 chr17 33422518 33422667 -61849984 + RMER21B LTR ERV1 387 567 -275 8 840 34 42 0 0 chr17 33423682 33423730 -61848921 + AT_rich Low_complexity Low_complexity 1 48 0 8 840 3152 42 39 0 chr17 33424070 33424451 -61848200 - MTA_Mm LTR MaLR 0 396 1 8 840 228 35 0 0 chr17 33424590 33424619 -61848032 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 8 840 321 280 27 0 chr17 33424719 33424794 -61847857 - RSINE1 SINE B4 -1 164 88 8 840 314 304 59 74 chr17 33424821 33424956 -61847695 + B1F2 SINE Alu 2 134 -15 8 840 363 96 0 0 chr17 33424956 33425008 -61847643 + (CA)n Simple_repeat Simple_repeat 1 52 0 8 840 347 60 0 20 chr17 33427166 33427217 -61845434 + (TTA)n Simple_repeat Simple_repeat 2 51 0 8 840 1046 221 15 34 chr17 33427379 33427646 -61845005 - Lx8 LINE L1 -362 7111 6850 8 840 315 0 0 0 chr17 33427646 33427681 -61844970 + (GAAA)n Simple_repeat Simple_repeat 4 38 0 8 840 1908 142 64 32 chr17 33427682 33428088 -61844563 - RMER10A LTR ERVL -6 436 18 8 840 1834 214 118 20 chr17 33428089 33428598 -61844053 - Lx8 LINE L1 -605 6868 6310 8 840 379 234 58 76 chr17 33428686 33428857 -61843794 - BLACKJACK DNA AcHobo -231 2713 2546 8 840 343 351 83 8 chr17 33428880 33429012 -61843639 - RSINE1 SINE B4 -22 143 2 8 840 414 69 0 0 chr17 33429014 33429072 -61843579 + (TG)n Simple_repeat Simple_repeat 1 58 0 8 840 445 224 47 87 chr17 33429122 33429249 -61843402 + B1_Mur1 SINE Alu 27 148 -1 8 840 624 236 67 28 chr17 33429761 33429940 -61842711 - RMER5 LTR ERV1 -10 524 339 8 840 637 190 112 140 chr17 33429939 33430153 -61842498 - RMER5 LTR ERV1 -326 208 1 8 840 498 206 0 86 chr17 33431300 33431417 -61841234 - PB1D9 SINE Alu -2 118 12 8 840 324 289 178 34 chr17 33431311 33431429 -61841222 - ID_B1 SINE B4 -9 215 81 8 840 1181 29 0 0 chr17 33432067 33432206 -61840445 - B1_Mus2 SINE Alu -8 139 1 8 840 21 0 0 0 chr17 33432209 33432230 -61840421 + AT_rich Low_complexity Low_complexity 1 21 0 8 840 3099 32 45 0 chr17 33433618 33433997 -61838654 - MTA_Mm LTR MaLR 0 396 1 8 840 513 88 0 0 chr17 33434090 33434170 -61838481 + (TTTC)n Simple_repeat Simple_repeat 2 81 0 8 840 1562 309 36 29 chr17 33434182 33434732 -61837919 - Lx5 LINE L1 -18 7032 6479 8 840 249 193 17 34 chr17 33434729 33434788 -61837863 - Lx6 LINE L1 -879 6581 6524 8 840 2059 207 175 17 chr17 33434776 33435585 -61837066 - Lx6 LINE L1 -1224 6236 5300 8 840 3927 122 30 9 chr17 33435727 33436358 -61836293 - Lx2 LINE L1 -1 6996 6353 8 840 647 211 0 13 chr17 33437513 33437662 -61834989 + MurSatRep1 Unknown Unknown 602 748 -1389 8 840 23 0 0 0 chr17 33437697 33437720 -61834931 + AT_rich Low_complexity Low_complexity 1 23 0 8 840 271 332 24 52 chr17 33440020 33440233 -61832418 + MurSatRep1 Unknown Unknown 1747 1953 -184 8 840 392 319 42 7 chr17 33440405 33440547 -61832104 - RSINE1 SINE B4 -14 151 5 8 840 21 0 0 0 chr17 33441826 33441847 -61830804 + AT_rich Low_complexity Low_complexity 1 21 0 8 840 696 244 60 33 chr17 33442888 33443070 -61829581 + B3 SINE B2 1 187 -29 8 840 239 242 182 40 chr17 33443310 33443409 -61829242 + PB1D9 SINE Alu 3 115 -5 8 840 219 36 0 0 chr17 33444202 33444230 -61828421 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 8 840 529 193 18 0 chr17 33444239 33444348 -61828303 - B1_Mur3 SINE Alu -30 119 9 8 840 301 289 16 32 chr17 33444348 33444364 -61828287 - ID_B1 SINE B4 -27 197 75 8 840 189 0 0 0 chr17 33444402 33444423 -61828228 + (TG)n Simple_repeat Simple_repeat 2 22 0 8 840 351 0 0 0 chr17 33444425 33444464 -61828187 + (GA)n Simple_repeat Simple_repeat 1 39 0 8 840 340 360 44 0 chr17 33444652 33444766 -61827885 + B3A SINE B2 4 122 -76 8 840 22 35 0 0 chr17 33444818 33444847 -61827804 + AT_rich Low_complexity Low_complexity 1 29 0 8 840 342 247 176 0 chr17 33444924 33445009 -61827642 + B1_Mus2 SINE Alu 2 101 -46 8 840 1307 234 262 0 chr17 33445415 33445885 -61826766 - Lx6 LINE L1 -10 7450 6858 9 840 233 204 0 0 chr17 33445885 33445929 -61826722 + C-rich Low_complexity Low_complexity 1 44 0 9 840 521 290 16 0 chr17 33445954 33446078 -61826573 - B1_Mur1 SINE Alu -22 127 2 9 840 563 318 103 20 chr17 33446907 33447455 -61825196 - L1M2 LINE L1 -855 5288 4700 9 840 414 0 0 0 chr17 33447455 33447501 -61825150 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 9 840 563 313 139 14 chr17 33447501 33447702 -61824949 - L1M2 LINE L1 -1444 4699 4428 9 840 482 286 92 17 chr17 33447777 33448126 -61824525 - L1M2 LINE L1 -2310 3570 3196 9 840 22 35 0 0 chr17 33448196 33448225 -61824426 + AT_rich Low_complexity Low_complexity 1 29 0 9 840 268 299 0 0 chr17 33448699 33448766 -61823885 - RLTR24 LTR ERV1 -458 71 5 9 840 4001 120 42 1 chr17 33449169 33450085 -61822566 + L1VL4 LINE L1 213 1170 -2389 9 840 16362 180 9 66 chr17 33450097 33452072 -61820579 + L1Md_F3 LINE L1 441 2405 -3471 9 840 3155 36 3 0 chr17 33452072 33452459 -61820192 + MTA_Mm LTR MaLR 1 388 -8 9 840 8736 48 7 0 chr17 33452463 33453553 -61819098 + MTA_Mm-int LTR MaLR 1 1098 0 9 840 3428 23 5 0 chr17 33453553 33453947 -61818704 + MTA_Mm LTR MaLR 1 396 0 9 840 23618 57 5 0 chr17 33453947 33457118 -61815533 + L1Md_F3 LINE L1 2401 5586 -297 9 840 8218 34 2 1 chr17 33457118 33458099 -61814552 + L1Md_F3 LINE L1 5587 6568 -16 9 840 21664 165 17 11 chr17 33458109 33460990 -61811661 + L1_Mus4 LINE L1 1511 4423 -1460 9 840 2021 97 6 59 chr17 33460990 33461330 -61811321 + RLTRETN_Mm LTR ERVK 1 322 0 9 840 21664 165 17 11 chr17 33461330 33461439 -61811212 + L1_Mus4 LINE L1 4424 4518 -1365 9 840 2213 47 0 18 chr17 33461439 33461720 -61810931 + L1Md_F2 LINE L1 6291 6566 -16 9 840 21664 137 17 9 chr17 33461720 33463152 -61809499 + L1_Mus4 LINE L1 4519 5963 -673 9 840 1768 266 85 13 chr17 33463607 33463922 -61808729 - Lx6 LINE L1 -982 6478 6147 9 840 1789 99 7 14 chr17 33463922 33464199 -61808452 - L1Md_F2 LINE L1 -1 6581 6307 9 840 1768 266 85 13 chr17 33464199 33464493 -61808158 - Lx6 LINE L1 -1314 6146 5825 9 840 1224 259 28 53 chr17 33464491 33464886 -61807765 - Lx5 LINE L1 0 7050 6666 9 840 28 0 0 0 chr17 33465620 33465648 -61807003 + AT_rich Low_complexity Low_complexity 1 28 0 9 840 917 280 130 20 chr17 33465648 33466056 -61806595 - Lx8 LINE L1 0 7473 7021 9 840 201 74 0 0 chr17 33466083 33466110 -61806541 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 9 840 231 310 134 43 chr17 33466251 33466460 -61806191 - MT2A LTR ERVL -6 527 300 9 840 541 311 64 81 chr17 33466795 33466845 -61805806 - B4A SINE B4 -13 279 182 9 840 848 188 28 0 chr17 33466845 33466989 -61805662 - B1_Mus1 SINE Alu 0 148 1 9 840 541 311 64 81 chr17 33466989 33467078 -61805573 - B4A SINE B4 -13 181 2 9 840 518 271 96 62 chr17 33467309 33467486 -61805165 - B3A SINE B2 -15 183 1 9 840 709 282 64 26 chr17 33467505 33467738 -61804913 - B4 SINE B4 -2 290 49 9 840 617 141 215 0 chr17 33468455 33468576 -61804075 - B1_Mur4 SINE Alu -2 148 2 9 840 639 203 58 7 chr17 33468603 33468742 -61803909 - B1_Mur4 SINE Alu 0 150 5 9 840 532 192 140 44 chr17 33469843 33469979 -61802672 + B1_Mur2 SINE Alu 1 149 0 9 840 295 360 30 30 chr17 33471251 33471554 -61801097 - MurSatRep1 Unknown Unknown -88 2049 1747 9 840 277 290 21 21 chr17 33471508 33471649 -61801002 - MMSAT4 Satellite Satellite 0 168 28 9 840 674 248 0 0 chr17 33473660 33473821 -61798830 - MurSatRep1 Unknown Unknown -1392 745 585 9 840 608 215 52 7 chr17 33474376 33474512 -61798139 + B1_Mur2 SINE Alu 2 143 -6 9 840 614 79 0 11 chr17 33474512 33474602 -61798049 + (GGAA)n Simple_repeat Simple_repeat 2 90 0 9 840 1206 78 0 16 chr17 33474605 33474788 -61797863 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 9 840 1709 254 63 24 chr17 33474791 33475332 -61797319 + Lx8 LINE L1 6912 7473 0 9 840 230 302 208 0 chr17 33475406 33475502 -61797149 + RSINE1 SINE B4 25 140 -25 9 840 228 304 0 0 chr17 33475536 33475582 -61797069 + MTD LTR MaLR 141 186 -233 9 840 279 79 0 0 chr17 33475704 33475742 -61796909 + (TATG)n Simple_repeat Simple_repeat 2 39 0 9 840 229 314 124 55 chr17 33475807 33475952 -61796699 + RMER20B LTR ERVK 382 536 -91 9 840 531 188 0 0 chr17 33475952 33476048 -61796603 + L1Md_F LINE L1 437 532 -5987 9 840 29941 99 44 5 chr17 33476045 33477445 -61795206 + L1Md_F2 LINE L1 510 1971 -3912 9 840 201 39 0 0 chr17 33477445 33477471 -61795180 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 9 840 29941 78 9 9 chr17 33477471 33478943 -61793708 + L1Md_F2 LINE L1 1972 3458 -2425 9 840 1207 48 0 0 chr17 33478943 33479090 -61793561 + B1_Mus2 SINE Alu 1 147 0 9 840 29941 78 9 9 chr17 33479090 33481232 -61791419 + L1Md_F2 LINE L1 3459 5582 -301 9 840 5522 73 39 4 chr17 33481236 33481987 -61790664 + L1Md_F2 LINE L1 5805 6581 -1 9 840 465 66 0 0 chr17 33482032 33482093 -61790558 + (TA)n Simple_repeat Simple_repeat 2 62 0 9 840 1411 153 26 0 chr17 33482325 33482554 -61790097 + RMER19A LTR ERVK 503 737 0 9 840 4176 168 135 43 chr17 33482663 33483932 -61788719 + L1_Mur3 LINE L1 97 1487 -4393 9 840 17631 165 103 13 chr17 33483934 33488538 -61784113 + L1VL4 LINE L1 538 5551 -335 9 840 7316 151 36 31 chr17 33488539 33488885 -61783766 + L1_Mur3 LINE L1 3514 3849 -2031 9 840 288 0 0 0 chr17 33488885 33488917 -61783734 + (CA)n Simple_repeat Simple_repeat 2 33 0 9 840 7316 151 36 31 chr17 33488917 33489374 -61783277 + L1_Mur3 LINE L1 3850 4296 -1584 9 840 333 0 0 0 chr17 33489374 33489411 -61783240 + (CA)n Simple_repeat Simple_repeat 1 37 0 9 840 7316 151 36 31 chr17 33489411 33489888 -61782763 + L1_Mur3 LINE L1 4297 4809 -1071 9 840 2343 141 31 0 chr17 33489888 33490270 -61782381 - ORR1B1 LTR MaLR 0 394 1 9 840 7316 151 36 31 chr17 33490270 33490526 -61782125 + L1_Mur3 LINE L1 4810 5057 -823 9 840 1210 55 0 0 chr17 33490528 33490673 -61781978 + B1_Mm SINE Alu 3 147 0 9 840 501 17 0 0 chr17 33490680 33490738 -61781913 + (GGGA)n Simple_repeat Simple_repeat 4 61 0 9 840 14413 93 8 4 chr17 33490767 33491768 -61780883 + L1_Mus1 LINE L1 3727 4732 -1151 9 840 270 0 0 0 chr17 33491768 33491798 -61780853 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 9 840 14413 73 4 6 chr17 33491798 33493369 -61779282 + L1_Mus1 LINE L1 4733 6301 -266 9 840 1011 251 157 73 chr17 33493375 33493840 -61778811 + Lx6 LINE L1 6941 7444 -16 9 840 304 310 44 24 chr17 33494465 33494716 -61777935 + L1_Rod LINE L1 3043 3298 -2549 9 840 277 265 15 0 chr17 33495224 33495292 -61777359 + ID SINE ID 2 70 -154 9 840 282 29 0 0 chr17 33495293 33495328 -61777323 + (GGAA)n Simple_repeat Simple_repeat 2 36 0 9 840 430 248 99 0 chr17 33496160 33496281 -61776370 - B4A SINE B4 -156 136 4 9 840 525 256 169 0 chr17 33496526 33496686 -61775965 + B3 SINE B2 29 215 -1 9 840 217 212 203 43 chr17 33496825 33496894 -61775757 + ID_B1 SINE B4 79 158 -66 9 840 339 85 0 0 chr17 33496904 33496951 -61775700 + (GGA)n Simple_repeat Simple_repeat 3 49 0 9 840 516 32 0 0 chr17 33496954 33497016 -61775635 + (GGAA)n Simple_repeat Simple_repeat 2 63 0 9 840 207 0 0 0 chr17 33497056 33497079 -61775572 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9 840 811 196 50 11 chr17 33497173 33497354 -61775297 + B2_Mm2 SINE B2 2 189 -6 9 840 3219 169 128 40 chr17 33497454 33497483 -61775168 - RMER19A LTR ERVK 0 737 719 9 840 2450 114 31 8 chr17 33497483 33497871 -61774780 - Lx2 LINE L1 -1 6996 6600 9 840 3219 169 128 40 chr17 33497871 33498513 -61774138 - RMER19A LTR ERVK -19 718 7 9 840 242 295 44 9 chr17 33498549 33498662 -61773989 + L1M1 LINE L1 5782 5898 -402 9 840 545 297 10 2 chr17 33498902 33499027 -61773624 - B1F2 SINE Alu -20 128 4 9 840 318 239 14 29 chr17 33498968 33499037 -61773614 - B4A SINE B4 -144 148 81 9 840 5312 108 58 1 chr17 33499150 33500000 -61772651 + L1Md_F LINE L1 184 1081 -5438 9 840 34382 34 0 2 chr17 33500002 33504481 -61768170 + L1Md_A LINE L1 1115 5586 -297 1 840 8812 15 0 0 chr17 33504481 33505477 -61767174 + L1Md_A LINE L1 5587 6582 0 1 840 385 22 0 0 chr17 33505485 33505530 -61767121 + L1Md_T LINE L1 5542 5586 -297 2 840 8489 26 7 0 chr17 33505530 33506519 -61766132 + L1Md_T LINE L1 5587 6582 0 2 840 379 250 70 42 chr17 33506520 33506662 -61765989 + L1MC LINE L1 3154 3299 -2847 3 840 198 0 0 0 chr17 33506671 33506693 -61765958 + (GGAA)n Simple_repeat Simple_repeat 3 24 0 4 840 1056 91 0 0 chr17 33506693 33506868 -61765783 + (CAGG)n Simple_repeat Simple_repeat 2 177 0 5 840 368 170 152 50 chr17 33507555 33507654 -61764997 - Lx4A LINE L1 -594 6464 6356 6 840 2589 106 71 24 chr17 33507651 33507722 -61764929 - Lx4A LINE L1 -985 6073 6012 6 840 1255 42 121 6 chr17 33507722 33507888 -61764763 - B2_Mm1a SINE B2 -7 186 2 7 840 7107 106 71 24 chr17 33507888 33508131 -61764520 - Lx4A LINE L1 -1047 6011 5740 6 840 246 32 0 0 chr17 33508131 33508162 -61764489 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8 840 7107 117 24 3 chr17 33508162 33509201 -61763450 - Lx4A LINE L1 -138 5739 4687 6 840 3423 128 42 9 chr17 33509517 33510092 -61762559 + Lx4A LINE L1 6103 6696 -362 9 840 2922 133 57 23 chr17 33510119 33510820 -61761831 - RLTR13D3 LTR ERVK 0 1114 217 1 840 1027 153 27 124 chr17 33510826 33511124 -61761527 + RMER17C LTR ERVK 134 402 -8 1 840 2051 151 36 19 chr17 33511124 33511488 -61761163 + Lx4A LINE L1 6689 7058 0 9 840 768 91 0 0 chr17 33511571 33511681 -61760970 + (TC)n Simple_repeat Simple_repeat 1 110 0 1 840 337 251 154 29 chr17 33511769 33512107 -61760544 + Lx8 LINE L1 3045 3377 -2503 1 840 1843 99 70 85 chr17 33512107 33512438 -61760213 + ORR1A3 LTR MaLR 1 326 0 1 840 647 288 114 40 chr17 33512438 33512995 -61759656 + Lx8 LINE L1 3378 4078 -2065 1 840 998 73 7 35 chr17 33512995 33513136 -61759515 + B1_Mus2 SINE Alu 1 137 -10 1 840 409 281 38 19 chr17 33513245 33513350 -61759301 - PB1D7 SINE Alu -5 115 9 1 840 254 306 96 58 chr17 33513260 33513364 -61759287 - ID_B1 SINE B4 -38 186 79 1 840 393 246 89 54 chr17 33513543 33513837 -61758814 + Lx8 LINE L1 5273 5617 -683 1 840 2073 175 137 16 chr17 33514112 33514419 -61758232 + Lx5 LINE L1 6573 6886 -164 1 840 2340 93 16 0 chr17 33514419 33514741 -61757910 + ORR1A2 LTR MaLR 1 327 0 1 840 2073 175 137 16 chr17 33514741 33514857 -61757794 + Lx5 LINE L1 6887 7047 -3 1 840 792 318 14 4 chr17 33515088 33515363 -61757288 + Lx8 LINE L1 6192 6469 -1004 1 840 1018 264 47 22 chr17 33515484 33515806 -61756845 + Lx5 LINE L1 6703 7032 -18 2 840 210 71 0 0 chr17 33515806 33515834 -61756817 + (TTAG)n Simple_repeat Simple_repeat 3 30 0 2 840 327 313 100 62 chr17 33515905 33516065 -61756586 - B3A SINE B2 -27 168 3 2 840 234 263 107 66 chr17 33516075 33516197 -61756454 + Lx8 LINE L1 6694 6820 -653 1 840 300 319 21 32 chr17 33516392 33516486 -61756165 + B3 SINE B2 48 140 -76 2 840 435 52 0 0 chr17 33516511 33516569 -61756082 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 840 22 35 0 0 chr17 33516569 33516598 -61756053 + AT_rich Low_complexity Low_complexity 1 29 0 2 840 506 321 11 67 chr17 33516836 33517016 -61755635 - B3A SINE B2 -24 174 5 2 840 304 323 152 8 chr17 33517626 33517751 -61754900 - RSINE1 SINE B4 -20 145 3 2 840 231 276 33 33 chr17 33518140 33518260 -61754391 - MMSAT4 Satellite Satellite -14 154 35 2 840 239 271 47 39 chr17 33518487 33518614 -61754037 - MMSAT4 Satellite Satellite -25 143 16 2 840 235 278 38 45 chr17 33518544 33518676 -61753975 - MurSatRep1 Unknown Unknown -260 1877 1747 3 840 213 0 81 0 chr17 33519542 33519579 -61753072 + (CAA)n Simple_repeat Simple_repeat 3 42 0 3 840 280 372 59 0 chr17 33519778 33519880 -61752771 + PB1D7 SINE Alu 12 119 -1 3 840 422 331 61 82 chr17 33519983 33520191 -61752460 + B3A SINE B2 9 214 -2 3 840 1195 282 51 25 chr17 33520270 33520623 -61752028 + MTD LTR MaLR 53 414 -5 3 840 685 249 28 17 chr17 33520636 33520816 -61751835 + MTD-int LTR MaLR 22 203 -1055 3 840 1041 247 44 13 chr17 33520831 33521057 -61751594 + 7SK RNA RNA 8 240 -91 3 840 1918 256 76 64 chr17 33521062 33521814 -61750837 + MTD-int LTR MaLR 194 1040 -218 3 840 3266 35 2 10 chr17 33521850 33522249 -61750402 + MTA_Mm LTR MaLR 1 396 0 3 840 203 188 21 0 chr17 33522347 33522395 -61750256 + (TTTG)n Simple_repeat Simple_repeat 3 51 0 3 840 1417 251 46 58 chr17 33522400 33522793 -61749858 + MTD LTR MaLR 18 405 -14 3 840 734 245 125 0 chr17 33522816 33523000 -61749651 + B3 SINE B2 6 212 -4 3 840 207 88 0 0 chr17 33523541 33523575 -61749076 + (TA)n Simple_repeat Simple_repeat 1 34 0 4 840 537 252 7 7 chr17 33523623 33523775 -61748876 - MurSatRep1 Unknown Unknown -1392 745 594 4 840 260 330 10 20 chr17 33523781 33523883 -61748768 + MTE2b LTR MaLR 4 104 -275 4 840 1713 161 148 6 chr17 33524572 33524910 -61747741 - ORR1B1 LTR MaLR -8 386 1 4 840 367 315 9 0 chr17 33525679 33525787 -61746864 + PB1D10 SINE Alu 1 109 -8 4 840 1632 270 76 41 chr17 33525856 33526429 -61746222 - L1_Mur3 LINE L1 -2818 3065 2486 4 840 2268 29 7 4 chr17 33526429 33526704 -61745947 - L1Md_F3 LINE L1 0 6584 6309 4 840 1632 262 76 39 chr17 33526704 33526963 -61745688 - L1_Mur3 LINE L1 -3390 2490 2218 4 840 1265 243 83 32 chr17 33526978 33526998 -61745653 + RMER15 LTR ERVL 141 156 -419 4 840 621 231 85 0 chr17 33526998 33527128 -61745523 + B1_Mur2 SINE Alu 2 142 -7 4 840 1265 243 83 32 chr17 33527128 33527481 -61745170 + RMER15 LTR ERVL 157 533 -42 4 840 644 224 0 0 chr17 33527624 33527740 -61744911 + B1_Mur1 SINE Alu 2 117 -32 4 840 805 287 6 0 chr17 33529054 33529235 -61743416 + B3A SINE B2 1 182 -16 5 840 410 271 32 19 chr17 33529268 33529422 -61743229 + L1M2 LINE L1 3027 3182 -2961 5 840 607 304 71 11 chr17 33529432 33529615 -61743036 + B3 SINE B2 6 199 -17 5 840 234 0 0 0 chr17 33529615 33529641 -61743010 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 840 302 198 132 0 chr17 33529656 33529762 -61742889 + L1M2 LINE L1 3198 3317 -2826 5 840 390 252 17 132 chr17 33529762 33529814 -61742837 + MT2B LTR ERVL 126 157 -444 5 840 887 176 0 13 chr17 33529814 33529964 -61742687 + B1_Mur1 SINE Alu 2 149 0 5 840 595 278 64 68 chr17 33530074 33530294 -61742357 + ID_B1 SINE B4 3 221 -3 5 840 269 320 32 70 chr17 33530312 33530470 -61742181 + RSINE1 SINE B4 2 153 -12 5 840 537 226 12 9 chr17 33530737 33530860 -61741791 + B1_Mur2 SINE Alu 5 129 -20 5 840 648 90 40 0 chr17 33530869 33530969 -61741682 + B1_Mm SINE Alu 43 146 -1 5 840 180 0 0 0 chr17 33531707 33531727 -61740924 + (A)n Simple_repeat Simple_repeat 1 20 0 6 840 851 301 104 56 chr17 33532310 33532591 -61740060 + MTD LTR MaLR 2 298 -121 6 840 1084 219 77 102 chr17 33532591 33533087 -61739564 + MT2B LTR ERVL 1 598 -3 6 840 226 215 132 44 chr17 33533087 33533154 -61739497 + MTEb LTR MaLR 267 339 -40 6 840 534 31 0 0 chr17 33533375 33533439 -61739212 + (GA)n Simple_repeat Simple_repeat 1 64 0 6 840 13033 165 55 7 chr17 33533569 33533633 -61739018 - L1VL4 LINE L1 -1734 4152 4088 6 840 591 40 0 0 chr17 33533633 33533707 -61738944 + (GA)n Simple_repeat Simple_repeat 2 75 0 6 840 13033 160 62 6 chr17 33533707 33536522 -61736129 - L1VL4 LINE L1 -1799 4087 1108 6 840 2538 64 3 0 chr17 33536538 33536865 -61735786 - L1_Mus2 LINE L1 -1 6565 6238 6 840 3029 160 55 1 chr17 33536900 33537222 -61735429 + L1_Mur2 LINE L1 3718 4065 -1812 6 840 420 20 0 0 chr17 33537222 33537271 -61735380 + (TC)n Simple_repeat Simple_repeat 1 49 0 6 840 3029 160 55 1 chr17 33537271 33537605 -61735046 + L1_Mur2 LINE L1 4066 4408 -1469 6 840 2011 289 51 13 chr17 33537602 33537957 -61734694 - Lx7 LINE L1 -1234 6462 6085 7 840 711 90 0 0 chr17 33537957 33538057 -61734594 + (TCC)n Simple_repeat Simple_repeat 1 100 0 7 840 2011 290 49 11 chr17 33538057 33538668 -61733983 - Lx7 LINE L1 -1612 6084 5456 7 840 978 123 44 16 chr17 33538804 33538986 -61733665 - B2_Mm2 SINE B2 -8 187 1 7 840 3470 15 2 17 chr17 33539533 33539935 -61732716 + MTA_Mm LTR MaLR 1 396 0 7 840 198 118 0 0 chr17 33540275 33540309 -61732342 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 840 34082 70 1 13 chr17 33542976 33548768 -61723883 + L1Md_F2 LINE L1 511 6220 -362 7 840 5410 60 0 11 chr17 33548780 33549475 -61723176 + L1Md_F2 LINE L1 5896 6582 0 7 840 7338 68 1 6 chr17 33549480 33550762 -61721889 + L1_Mus2 LINE L1 5290 6566 0 7 840 3123 111 24 8 chr17 33550790 33551282 -61721369 + Lx LINE L1 5860 6359 -295 7 1 30515 49 0 61 chr17 33551281 33554476 -61718175 + L1Md_T LINE L1 162 3425 -2461 7 841 3837 41 2 0 chr17 33554476 33554937 -61717714 - L1Md_T LINE L1 0 6582 6121 8 841 30515 23 0 13 chr17 33554937 33557458 -61715193 + L1Md_T LINE L1 3426 5589 -297 7 841 8549 37 0 0 chr17 33557458 33558454 -61714197 + L1Md_T LINE L1 5590 6585 0 7 841 1517 109 91 38 chr17 33558482 33558769 -61713882 + Lx LINE L1 6346 6647 -7 7 841 3809 190 55 87 chr17 33559287 33560443 -61712208 + Lx8 LINE L1 4871 6050 -1594 8 841 32687 79 21 11 chr17 33560465 33564252 -61708399 + L1Md_F2 LINE L1 391 4227 -1656 8 841 3327 28 10 0 chr17 33564252 33564643 -61708008 + MTA_Mm LTR MaLR 1 395 -1 8 841 32687 70 5 13 chr17 33564643 33566019 -61706632 + L1Md_F2 LINE L1 4228 5586 -297 8 841 7815 60 4 10 chr17 33566020 33567012 -61705639 + L1Md_F2 LINE L1 5588 6573 -9 8 841 415 301 51 29 chr17 33567127 33567264 -61705387 + RSINE1 SINE B4 2 141 -24 8 841 621 251 54 46 chr17 33567336 33567588 -61705063 + L1M2 LINE L1 3802 4049 -2091 8 841 307 298 77 0 chr17 33567599 33567703 -61704948 + RSINE1 SINE B4 3 114 -51 8 841 545 213 232 24 chr17 33567753 33567921 -61704730 - B3 SINE B2 -4 212 10 8 841 1444 307 36 15 chr17 33568135 33568611 -61704040 + Lx8 LINE L1 6750 7235 -238 8 841 636 14 0 0 chr17 33568809 33568882 -61703769 + (TG)n Simple_repeat Simple_repeat 2 74 0 8 841 226 246 32 32 chr17 33569158 33569221 -61703430 + Lx8 LINE L1 7158 7220 -253 8 841 324 264 0 0 chr17 33569595 33569682 -61702969 + RMER15 LTR ERVL 403 489 -86 9 841 690 13 0 0 chr17 33571502 33571581 -61701070 + (GA)n Simple_repeat Simple_repeat 2 80 0 9 841 1810 279 99 18 chr17 33571813 33572427 -61700224 - Lx8 LINE L1 -2 7471 6808 9 841 531 0 0 0 chr17 33573767 33573826 -61698825 + (GA)n Simple_repeat Simple_repeat 1 59 0 9 841 683 303 49 102 chr17 33573829 33574060 -61698591 - B4A SINE B4 0 292 77 9 841 604 153 175 16 chr17 33574060 33574186 -61698465 - B1_Mus2 SINE Alu 0 147 2 9 841 683 303 49 102 chr17 33574186 33574259 -61698392 - B4A SINE B4 -216 76 4 9 841 399 262 7 67 chr17 33574262 33574397 -61698254 - PB1 SINE Alu 0 127 1 9 841 4962 82 65 4 chr17 33574406 33575166 -61697485 - L1_Mus2 LINE L1 -62 6520 5759 9 841 905 87 29 0 chr17 33575167 33575305 -61697346 + L1_Mus2 LINE L1 6424 6565 -1 9 841 421 209 25 32 chr17 33575440 33575598 -61697053 + (CA)n Simple_repeat Simple_repeat 1 157 0 9 841 341 200 88 0 chr17 33575701 33575781 -61696870 - L1_Rod LINE L1 -26 5821 5735 9 841 1007 205 15 24 chr17 33575881 33576086 -61696565 - Lx6 LINE L1 0 7460 7258 1 841 959 149 34 22 chr17 33576338 33576516 -61696135 - URR1B DNA MER1_type -18 207 28 1 841 981 113 0 0 chr17 33577408 33577585 -61695066 + (TG)n Simple_repeat Simple_repeat 1 177 0 1 841 599 357 18 25 chr17 33577620 33577899 -61694752 - B4A SINE B4 -14 278 2 1 841 246 221 86 29 chr17 33578211 33578281 -61694370 + ID_B1 SINE B4 119 192 -32 1 841 280 246 72 0 chr17 33578298 33578367 -61694284 + B4 SINE B4 1 74 -218 1 841 514 148 0 19 chr17 33578392 33578495 -61694156 + GA-rich Low_complexity Low_complexity 4 104 0 1 841 742 222 7 0 chr17 33578570 33578723 -61693928 + Lx4B LINE L1 6839 6992 -66 1 841 189 0 0 0 chr17 33578737 33578758 -61693893 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 1 841 225 0 0 0 chr17 33578758 33578782 -61693869 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 841 325 225 61 92 chr17 33579010 33579070 -61693581 + B3A SINE B2 5 69 -129 1 841 2952 75 17 12 chr17 33579070 33579488 -61693163 - BGLII LTR ERVK 0 421 2 1 841 325 218 75 83 chr17 33579488 33579547 -61693104 + B3A SINE B2 65 123 -72 1 841 423 253 16 8 chr17 33579577 33579729 -61692922 + ERVL-int LTR ERVL 5451 5647 -110 1 841 768 273 219 7 chr17 33579732 33580042 -61692609 - MTE2b LTR MaLR -3 376 1 1 841 573 289 47 0 chr17 33580154 33580344 -61692307 + MLT2D LTR ERVL 1 199 -215 1 841 729 88 0 0 chr17 33580449 33580551 -61692100 + (GGAA)n Simple_repeat Simple_repeat 1 102 0 1 841 915 261 105 70 chr17 33580624 33581023 -61691628 - Lx8 LINE L1 -248 7225 6813 1 841 236 203 171 14 chr17 33581484 33581554 -61691097 + B4 SINE B4 148 228 -64 1 841 390 224 10 39 chr17 33581557 33581659 -61690992 + RSINE1 SINE B4 7 105 -60 1 841 252 0 0 0 chr17 33581683 33581711 -61690940 + (TAA)n Simple_repeat Simple_repeat 1 28 0 1 841 4422 204 23 16 chr17 33582229 33583623 -61689028 + L1_Mur1 LINE L1 866 2267 -3619 1 841 10251 82 16 9 chr17 33583632 33585792 -61686859 - L1_Mus3 LINE L1 0 6638 4477 1 841 5604 103 6 6 chr17 33585792 33586595 -61686056 + L1_Mus3 LINE L1 5836 6638 0 1 841 1935 192 54 3 chr17 33586610 33587001 -61685650 + Lx2B LINE L1 6334 6744 -256 1 841 209 250 17 0 chr17 33587008 33587068 -61685583 - L2c LINE L2 -315 3072 3012 1 841 320 245 128 28 chr17 33587254 33587363 -61685288 + B4A SINE B4 101 220 -72 1 841 234 0 0 0 chr17 33587419 33587445 -61685206 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 841 476 263 0 36 chr17 33587888 33588026 -61684625 + B4A SINE B4 159 291 -1 1 841 431 146 135 0 chr17 33588090 33588179 -61684472 - MTD LTR MaLR -14 405 305 1 841 697 11 22 0 chr17 33588192 33588282 -61684369 + (TC)n Simple_repeat Simple_repeat 1 92 0 1 841 1066 216 146 0 chr17 33588286 33588540 -61684111 + MTD LTR MaLR 121 411 -8 1 841 420 328 8 30 chr17 33589206 33589338 -61683313 + RSINE1 SINE B4 37 165 0 1 841 238 175 0 0 chr17 33589397 33589437 -61683214 + B3A SINE B2 2 41 -157 1 841 9033 74 8 11 chr17 33589437 33591294 -61681357 + Lx3_Mus LINE L1 4955 6807 -202 1 841 320 292 11 0 chr17 33591294 33591401 -61681250 - B4 SINE B4 -104 188 81 1 841 3502 50 11 2 chr17 33591403 33591843 -61680808 - L1_Mus2 LINE L1 0 6566 6123 1 841 6092 53 1 11 chr17 33591872 33592633 -61680018 + L1_Mus2 LINE L1 5813 6566 0 1 841 271 174 101 0 chr17 33592657 33592726 -61679925 - B4A SINE B4 -214 78 3 1 841 683 186 8 0 chr17 33592909 33593027 -61679624 - RSINE1 SINE B4 -41 124 6 1 841 414 278 92 64 chr17 33593078 33593251 -61679400 - B3A SINE B2 -16 182 5 1 841 493 316 21 88 chr17 33593259 33593498 -61679153 - B4A SINE B4 -68 224 2 1 841 288 227 15 0 chr17 33593989 33594055 -61678596 + PB1 SINE Alu 42 108 -19 1 841 554 205 0 9 chr17 33594073 33594186 -61678465 + RSINE1 SINE B4 4 115 -50 1 841 1117 103 6 33 chr17 33594355 33594536 -61678115 - L1_Mur2 LINE L1 -976 4901 4726 1 841 7794 50 2 1 chr17 33594539 33595481 -61677170 - L1Md_F2 LINE L1 0 6582 5640 1 841 893 148 7 0 chr17 33595465 33595614 -61677037 - L1_Mur2 LINE L1 -1140 4737 4588 1 841 1397 151 17 0 chr17 33595610 33595842 -61676809 + L1_Mur2 LINE L1 4897 5132 -745 1 841 2249 34 0 0 chr17 33595835 33596100 -61676551 - L1Md_T LINE L1 -546 6036 5772 1 841 4391 76 0 0 chr17 33596100 33596664 -61675987 + L1Md_T LINE L1 6019 6582 0 1 841 1958 133 24 103 chr17 33596664 33596833 -61675818 + L1_Mur2 LINE L1 5119 5281 -596 1 841 1084 189 34 10 chr17 33596833 33597041 -61675610 + Lx4A LINE L1 6844 7056 -2 1 841 1958 133 24 103 chr17 33597041 33597249 -61675402 + L1_Mur2 LINE L1 5282 5466 -411 1 841 5213 142 22 8 chr17 33597254 33598111 -61674540 + Lx4B LINE L1 6188 7056 -2 1 841 26 50 0 0 chr17 33598587 33598627 -61674024 + AT_rich Low_complexity Low_complexity 1 40 0 1 841 627 269 66 0 chr17 33598923 33599090 -61673561 - ID_B1 SINE B4 -7 217 40 1 841 369 258 21 0 chr17 33599266 33599363 -61673288 + ID_B1 SINE B4 84 182 -42 1 841 676 305 81 58 chr17 33599369 33599630 -61673021 - B4 SINE B4 -2 290 24 1 841 926 266 46 14 chr17 33599746 33600028 -61672623 + B4A SINE B4 2 292 0 1 841 294 115 0 0 chr17 33600028 33600080 -61672571 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 841 1453 130 67 8 chr17 33601424 33601664 -61670987 + Lx4A LINE L1 6773 7026 -32 1 841 252 329 0 14 chr17 33601677 33601751 -61670900 + Lx8 LINE L1 7153 7225 -248 1 841 283 258 0 0 chr17 33601811 33601877 -61670774 + Lx8 LINE L1 7158 7223 -250 1 841 351 211 0 0 chr17 33601965 33602041 -61670610 + RMER15 LTR ERVL 394 469 -106 1 841 271 232 29 0 chr17 33602116 33602185 -61670466 + Lx8 LINE L1 7392 7462 -11 1 841 202 318 11 0 chr17 33602664 33602752 -61669899 + (CATA)n Simple_repeat Simple_repeat 2 90 0 1 841 362 338 6 18 chr17 33603136 33603299 -61669352 + (TGGA)n Simple_repeat Simple_repeat 1 161 0 1 841 374 0 22 0 chr17 33603346 33603392 -61669259 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 1 841 557 110 11 0 chr17 33603472 33603563 -61669088 + (TAGA)n Simple_repeat Simple_repeat 1 92 0 1 841 1452 223 62 37 chr17 33603574 33603975 -61668676 - MTD LTR MaLR -8 411 1 1 841 300 27 0 0 chr17 33603978 33604015 -61668636 + (TAGA)n Simple_repeat Simple_repeat 3 39 0 1 841 611 118 7 13 chr17 33604081 33604236 -61668415 + (TGGA)n Simple_repeat Simple_repeat 1 153 0 1 841 344 330 35 0 chr17 33604243 33604453 -61668198 + (TAGA)n Simple_repeat Simple_repeat 1 217 0 1 841 300 271 10 30 chr17 33604406 33604505 -61668146 + (TGGA)n Simple_repeat Simple_repeat 1 97 0 1 841 299 323 99 66 chr17 33606272 33606502 -61666149 + B4 SINE B4 43 281 -11 1 841 579 29 0 0 chr17 33606502 33606571 -61666080 + (TC)n Simple_repeat Simple_repeat 1 69 0 1 841 299 323 99 66 chr17 33606571 33606582 -61666069 + B4 SINE B4 282 292 0 1 841 273 313 20 0 chr17 33607020 33607119 -61665532 - B4A SINE B4 -44 248 148 1 841 380 264 22 11 chr17 33607113 33607205 -61665446 + RSINE1 SINE B4 67 159 -6 1 841 734 162 57 35 chr17 33607250 33607391 -61665260 + B1_Mur3 SINE Alu 5 148 -1 1 841 576 29 0 0 chr17 33607428 33607498 -61665153 + (GA)n Simple_repeat Simple_repeat 2 71 0 1 841 270 299 0 0 chr17 33607506 33607573 -61665078 + AluG_3 SINE Alu 148 214 -97 1 841 315 224 34 93 chr17 33607622 33607740 -61664911 + PB1D9 SINE Alu 1 111 -9 1 841 265 274 31 14 chr17 33607751 33608043 -61664608 + GA-rich Low_complexity Low_complexity 1 297 0 1 841 254 246 14 0 chr17 33608768 33608837 -61663814 + L1MA6 LINE L1 5956 6025 -266 1 841 216 67 0 0 chr17 33608892 33608922 -61663729 + (A)n Simple_repeat Simple_repeat 1 30 0 1 841 579 15 0 0 chr17 33608986 33609054 -61663597 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 1 841 595 284 81 0 chr17 33609075 33609223 -61663428 + RSINE1 SINE B4 4 163 -2 1 841 813 154 7 0 chr17 33609326 33609462 -61663189 + B1_Mus2 SINE Alu 11 147 0 1 841 289 234 52 0 chr17 33609532 33609609 -61663042 + L1MA6 LINE L1 6097 6177 -123 1 841 402 335 170 13 chr17 33609628 33609852 -61662799 + B4A SINE B4 33 291 -1 1 841 862 181 20 13 chr17 33609955 33610106 -61662545 + RSINE1 SINE B4 14 165 0 1 841 32 0 0 0 chr17 33610189 33610221 -61662430 + AT_rich Low_complexity Low_complexity 1 32 0 1 841 726 255 88 0 chr17 33610229 33610421 -61662230 - B3 SINE B2 -7 209 1 1 841 5087 43 38 0 chr17 33610588 33611197 -61661454 - L1_Mus1 LINE L1 0 6567 5936 1 841 903 276 46 28 chr17 33611701 33611984 -61660667 + Lx8 LINE L1 6733 7020 -453 1 841 4204 127 19 34 chr17 33611983 33612669 -61659982 + L1VL1 LINE L1 221 896 -5526 1 841 3314 106 29 15 chr17 33612671 33613190 -61659461 + RLTR13B2 LTR ERVK 297 822 0 1 841 29295 121 14 8 chr17 33613197 33613298 -61659353 + L1_Mus1 LINE L1 1204 1296 -4587 1 841 2779 52 6 0 chr17 33613298 33613643 -61659008 + L1_Mus1 LINE L1 6221 6567 0 1 841 29295 121 14 8 chr17 33613643 33616396 -61656255 + L1_Mus1 LINE L1 1297 4062 -1821 1 841 645 14 0 0 chr17 33616396 33616470 -61656181 + (TC)n Simple_repeat Simple_repeat 2 75 0 1 841 29295 93 10 5 chr17 33616470 33618946 -61653705 + L1_Mus1 LINE L1 4063 6567 0 1 841 532 297 36 0 chr17 33618957 33619122 -61653529 - ID_B1 SINE B4 -52 172 2 1 841 314 269 10 51 chr17 33619460 33619558 -61653093 + ID_B1 SINE B4 126 219 -5 1 841 543 69 0 0 chr17 33619561 33619633 -61653018 + (GA)n Simple_repeat Simple_repeat 1 72 0 1 841 397 262 38 33 chr17 33619636 33619784 -61652867 + L1M5 LINE L1 5374 5526 -598 1 841 455 338 39 39 chr17 33619847 33620077 -61652574 + B4A SINE B4 1 230 -62 1 841 312 277 383 0 chr17 33620077 33620184 -61652467 + RSINE1 SINE B4 3 150 -15 1 841 248 247 26 52 chr17 33621408 33621485 -61651166 - ID4_ SINE ID -1 82 8 1 841 207 349 0 0 chr17 33621526 33621592 -61651059 + (CGTG)n Simple_repeat Simple_repeat 2 67 0 1 841 410 307 54 43 chr17 33621597 33621781 -61650870 - B4A SINE B4 0 292 107 2 841 698 221 57 0 chr17 33621880 33622020 -61650631 - B1_Mur1 SINE Alu 0 149 2 2 841 211 222 0 18 chr17 33622121 33622176 -61650475 + B4A SINE B4 8 61 -231 2 841 389 257 9 37 chr17 33622201 33622310 -61650341 + B4A SINE B4 187 292 0 2 841 559 222 15 67 chr17 33622574 33622709 -61649942 - RSINE1 SINE B4 -33 132 5 2 841 213 89 224 82 chr17 33622715 33622764 -61649887 - PB1D10 SINE Alu 0 117 62 2 841 618 241 58 14 chr17 33622720 33622859 -61649792 - ID_B1 SINE B4 -1 223 79 2 841 804 103 17 25 chr17 33622910 33623030 -61649621 + PB1D9 SINE Alu 2 120 0 2 841 291 54 0 0 chr17 33623045 33623082 -61649569 + (GAAAA)n Simple_repeat Simple_repeat 2 38 0 2 841 213 39 0 0 chr17 33623092 33623118 -61649533 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 841 182 216 27 0 chr17 33623235 33623272 -61649379 + L2a LINE L2 3361 3398 -28 2 841 234 330 99 28 chr17 33623249 33623278 -61649373 - MIRb SINE MIR -34 234 206 2 841 180 111 0 0 chr17 33623278 33623305 -61649346 + (TGAG)n Simple_repeat Simple_repeat 1 27 0 2 841 234 330 99 28 chr17 33623305 33623456 -61649195 - MIRb SINE MIR -63 205 41 2 841 245 226 56 19 chr17 33623918 33623972 -61648679 + L2 LINE L2 2790 2845 -574 2 841 566 219 101 0 chr17 33624274 33624393 -61648258 - RSINE1 SINE B4 -34 131 1 2 841 351 0 0 0 chr17 33624512 33624551 -61648100 + (TC)n Simple_repeat Simple_repeat 2 40 0 2 841 378 0 0 0 chr17 33624551 33624592 -61648059 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 841 366 23 0 0 chr17 33624592 33624634 -61648017 + (GA)n Simple_repeat Simple_repeat 1 43 0 2 841 231 195 0 0 chr17 33624925 33624966 -61647685 - B1F SINE Alu -9 140 100 2 841 232 272 28 28 chr17 33625012 33625118 -61647533 - Lx9 LINE L1 -17 7627 7522 2 841 288 0 0 0 chr17 33625122 33625154 -61647497 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 841 543 280 134 22 chr17 33625154 33625304 -61647347 - Lx9 LINE L1 -193 7451 7275 2 841 288 0 0 0 chr17 33625304 33625336 -61647315 + (TC)n Simple_repeat Simple_repeat 1 32 0 2 841 207 0 0 0 chr17 33625336 33625358 -61647293 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 841 543 280 134 22 chr17 33625358 33625429 -61647222 - Lx9 LINE L1 -370 7274 7205 2 841 738 182 7 36 chr17 33625461 33625598 -61647053 + B1_Mur4 SINE Alu 11 143 -7 2 841 231 140 0 0 chr17 33625600 33625650 -61647001 + (GAAA)n Simple_repeat Simple_repeat 3 52 0 2 841 27 62 0 0 chr17 33625722 33625770 -61646881 + AT_rich Low_complexity Low_complexity 1 48 0 2 841 282 180 0 32 chr17 33625793 33625856 -61646795 - PB1D9 SINE Alu -54 66 6 2 841 466 335 12 47 chr17 33625893 33626062 -61646589 + B4A SINE B4 4 166 -126 2 841 273 295 12 71 chr17 33626091 33626175 -61646476 + RSINE1 SINE B4 76 154 -11 2 841 255 23 0 64 chr17 33626208 33626255 -61646396 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 841 257 297 10 19 chr17 33626288 33626391 -61646260 + GA-rich Low_complexity Low_complexity 3 104 0 2 841 315 262 115 88 chr17 33626392 33626505 -61646146 + RSINE1 SINE B4 50 165 0 2 841 548 299 16 73 chr17 33626522 33626748 -61645903 + ID_B1 SINE B4 81 290 -2 2 841 30 0 0 0 chr17 33628184 33628214 -61644437 + AT_rich Low_complexity Low_complexity 1 30 0 2 841 341 258 149 11 chr17 33628879 33628973 -61643678 - ID_B1 SINE B4 -117 107 1 2 841 410 314 20 62 chr17 33629168 33629314 -61643337 + B4 SINE B4 1 140 -152 2 841 472 79 22 22 chr17 33629409 33629500 -61643151 + (CAGAGA)n Simple_repeat Simple_repeat 6 96 0 2 841 220 214 18 0 chr17 33629517 33629573 -61643078 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 841 463 228 99 0 chr17 33629595 33629696 -61642955 + PB1D9 SINE Alu 3 113 -7 2 841 21 0 0 0 chr17 33629696 33629717 -61642934 + AT_rich Low_complexity Low_complexity 1 21 0 2 841 933 212 76 14 chr17 33629758 33629968 -61642683 + URR1A DNA MER1_type 1 223 -3 2 841 448 245 29 0 chr17 33630618 33630720 -61641931 + RSINE1 SINE B4 2 106 -59 2 841 387 0 0 0 chr17 33630755 33630798 -61641853 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 841 25 0 0 0 chr17 33630939 33630964 -61641687 + AT_rich Low_complexity Low_complexity 1 25 0 2 841 198 0 0 0 chr17 33630964 33630986 -61641665 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 2 841 819 123 77 0 chr17 33631050 33631180 -61641471 - B1_Mur2 SINE Alu -8 141 2 2 841 435 128 0 0 chr17 33631307 33631393 -61641258 + (TC)n Simple_repeat Simple_repeat 1 86 0 2 841 1258 68 90 6 chr17 33631439 33631617 -61641034 + B2_Mm2 SINE B2 1 193 -2 2 841 400 275 78 0 chr17 33631637 33631779 -61640872 - Lx7 LINE L1 -329 7367 7215 2 841 458 158 84 0 chr17 33631781 33631876 -61640775 + Lx7 LINE L1 7559 7661 -35 2 841 3564 117 146 24 chr17 33631879 33632539 -61640112 - RMER6A LTR ERVK -16 740 1 2 841 2319 75 65 0 chr17 33632539 33632846 -61639805 - ORR1A2 LTR MaLR 0 327 1 2 841 4814 207 51 6 chr17 33632846 33633826 -61638825 - Lx7 LINE L1 -829 6867 5850 2 841 1067 178 62 13 chr17 33633830 33634175 -61638476 + RMER6B LTR ERVK 1 419 -42 2 841 340 247 73 31 chr17 33634423 33634519 -61638132 + RMER10A LTR ERVL 318 417 -25 2 841 2085 155 18 0 chr17 33634524 33634853 -61637798 - L1_Mur3 LINE L1 -126 5754 5420 2 841 1225 220 37 27 chr17 33635162 33635461 -61637190 + Lx2B LINE L1 6696 6997 -3 2 841 26 50 0 0 chr17 33635716 33635756 -61636895 + AT_rich Low_complexity Low_complexity 1 40 0 2 841 992 79 20 7 chr17 33635756 33635909 -61636742 - L1_Mus3 LINE L1 -9 6629 6475 2 841 298 222 73 9 chr17 33636277 33636368 -61636283 - MIR SINE MIR -109 159 66 2 841 350 286 41 0 chr17 33636514 33636612 -61636039 + ZP3AR Satellite Satellite 12 113 -99 2 841 220 189 0 0 chr17 33636623 33636660 -61635991 + ID SINE ID 31 67 -157 2 841 1485 63 0 4 chr17 33637010 33637284 -61635367 + (GGGA)n Simple_repeat Simple_repeat 1 272 0 2 841 2242 137 42 3 chr17 33637604 33637962 -61634689 - Lx4A LINE L1 -1 7057 6686 2 841 2384 98 144 3 chr17 33637962 33638331 -61634320 + L1_Mur2 LINE L1 5424 5844 -33 2 841 274 202 284 0 chr17 33638601 33638742 -61633909 + B3A SINE B2 2 191 -25 2 841 1188 111 0 0 chr17 33638753 33638933 -61633718 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2 841 508 214 35 35 chr17 33639280 33639396 -61633255 + PB1D9 SINE Alu 5 120 0 2 841 418 277 47 89 chr17 33639618 33639832 -61632819 + RMER10B LTR ERVL 194 398 0 2 841 27 81 0 0 chr17 33639862 33639924 -61632727 + AT_rich Low_complexity Low_complexity 1 62 0 2 841 362 338 22 44 chr17 33639958 33640094 -61632557 - RSINE1 SINE B4 -28 137 5 2 841 486 0 0 0 chr17 33640104 33640158 -61632493 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 841 234 0 0 0 chr17 33640330 33640356 -61632295 + (CCA)n Simple_repeat Simple_repeat 1 26 0 2 841 585 0 0 0 chr17 33640356 33640421 -61632230 + (CAAAA)n Simple_repeat Simple_repeat 2 66 0 2 841 384 222 41 49 chr17 33640925 33641048 -61631603 + LTR85b LTR Gypsy? 611 732 -52 2 841 222 37 0 0 chr17 33641352 33641379 -61631272 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 841 757 235 0 0 chr17 33641411 33641547 -61631104 - RSINE1 SINE B4 -18 147 12 2 841 285 222 98 22 chr17 33641644 33641736 -61630915 + RSINE1 SINE B4 6 104 -61 2 841 468 202 0 0 chr17 33641751 33641797 -61630854 + polypyrimidine Low_complexity Low_complexity 129 174 0 2 841 297 0 0 0 chr17 33641797 33641830 -61630821 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 841 468 202 0 0 chr17 33641830 33641956 -61630695 + CT-rich Low_complexity Low_complexity 3 128 0 2 841 428 289 0 11 chr17 33641959 33642134 -61630517 + (TCTCTG)n Simple_repeat Simple_repeat 4 176 0 2 841 495 130 0 0 chr17 33642137 33642237 -61630414 + (TC)n Simple_repeat Simple_repeat 1 100 0 2 841 360 0 0 0 chr17 33642237 33642277 -61630374 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 841 408 125 62 0 chr17 33642321 33642385 -61630266 - B3A SINE B2 -130 68 1 2 841 236 328 80 29 chr17 33642395 33642533 -61630118 + L2b LINE L2 3000 3144 -231 2 841 649 263 42 88 chr17 33642607 33642799 -61629852 - RMER5 LTR ERV1 0 534 352 2 841 607 211 76 23 chr17 33642814 33642945 -61629706 - B1_Mur1 SINE Alu 0 149 12 2 841 582 319 60 34 chr17 33642952 33643186 -61629465 - RMER5 LTR ERV1 -177 357 118 2 841 420 297 127 0 chr17 33643197 33643315 -61629336 + RSINE1 SINE B4 11 143 -22 2 841 1010 144 0 0 chr17 33643472 33643618 -61629033 + B1_Mur4 SINE Alu 5 150 0 2 841 1685 168 35 14 chr17 33644018 33644307 -61628344 + ORR1C1 LTR MaLR 1 295 -83 2 841 1190 75 0 0 chr17 33644316 33644463 -61628188 - B1_Mus1 SINE Alu 0 148 2 2 841 538 274 17 8 chr17 33644505 33644623 -61628028 + RSINE1 SINE B4 43 161 -4 2 841 23 68 0 0 chr17 33644623 33644667 -61627984 + AT_rich Low_complexity Low_complexity 1 44 0 2 841 3225 56 5 2 chr17 33644672 33645067 -61627584 + MTA_Mm LTR MaLR 1 396 0 2 841 363 330 16 65 chr17 33645086 33645209 -61627442 + MTE-int LTR MaLR 1110 1226 -354 2 841 870 140 0 0 chr17 33645217 33645396 -61627255 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 841 532 289 37 7 chr17 33645442 33645578 -61627073 - RSINE1 SINE B4 -15 150 11 2 841 1423 75 32 0 chr17 33645627 33645814 -61626837 + B2_Mm2 SINE B2 2 194 -1 2 841 530 287 24 16 chr17 33645886 33646010 -61626641 + RSINE1 SINE B4 37 161 -4 2 841 324 227 11 148 chr17 33646036 33646094 -61626557 + B4A SINE B4 217 269 -23 2 841 414 39 0 0 chr17 33646094 33646146 -61626505 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 841 324 227 11 148 chr17 33646146 33646175 -61626476 + B4A SINE B4 270 292 0 2 841 344 205 0 82 chr17 33646191 33646276 -61626375 + L1MA6 LINE L1 6198 6275 -25 3 841 854 167 13 6 chr17 33646302 33646459 -61626192 - MTD LTR MaLR -9 410 253 3 841 1810 173 41 43 chr17 33646459 33646851 -61625800 + ORR1B1 LTR MaLR 1 391 -3 3 841 342 277 32 0 chr17 33646858 33646952 -61625699 - MTD LTR MaLR -311 108 12 3 841 847 312 67 0 chr17 33647227 33647509 -61625142 + Lx8 LINE L1 6689 6989 -484 3 841 599 215 81 30 chr17 33647543 33647735 -61624916 + MTD LTR MaLR 154 406 -13 3 841 1111 95 7 0 chr17 33647977 33648124 -61624527 + B1_Mus1 SINE Alu 1 148 0 3 841 741 53 0 0 chr17 33648340 33648434 -61624217 + (GAAA)n Simple_repeat Simple_repeat 3 96 0 3 841 984 196 59 0 chr17 33648438 33648642 -61624009 + B3 SINE B2 1 216 0 3 841 581 129 0 19 chr17 33649076 33649179 -61623472 + (TCCC)n Simple_repeat Simple_repeat 4 104 0 3 841 249 117 0 48 chr17 33649445 33649508 -61623143 + GA-rich Low_complexity Low_complexity 3 62 0 3 841 266 0 29 0 chr17 33650887 33650921 -61621730 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 841 483 219 31 20 chr17 33650971 33651069 -61621582 - B3A SINE B2 -16 182 84 3 841 839 230 193 44 chr17 33651179 33651475 -61621176 - ORR1E LTR MaLR -19 340 1 3 841 724 239 56 28 chr17 33651495 33651710 -61620941 - ID_B1 SINE B4 -1 223 3 3 841 1341 87 5 26 chr17 33651748 33651937 -61620714 + B2_Mm1t SINE B2 1 185 -8 3 841 736 258 85 15 chr17 33652078 33652279 -61620372 - B3 SINE B2 0 216 2 3 841 748 282 12 78 chr17 33652280 33652522 -61620129 - B4A SINE B4 -65 227 2 3 841 695 208 20 20 chr17 33652601 33652748 -61619903 + B1_Mur2 SINE Alu 3 149 0 3 841 270 0 0 0 chr17 33653373 33653403 -61619248 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 3 841 725 209 0 8 chr17 33653403 33653533 -61619118 - B1_Mur4 SINE Alu -12 138 10 3 841 815 301 5 5 chr17 33653567 33653751 -61618900 - B3 SINE B2 -10 206 23 3 841 297 51 0 0 chr17 33653751 33653790 -61618861 + (TTTTG)n Simple_repeat Simple_repeat 3 41 0 3 841 309 167 32 48 chr17 33653790 33653853 -61618798 - ID_B1 SINE B4 -18 206 145 3 841 299 269 40 56 chr17 33653881 33654007 -61618644 - RNLTR23 LTR ERVK -40 602 479 3 841 540 279 25 0 chr17 33654298 33654420 -61618231 - RSINE1 SINE B4 -38 127 3 3 841 524 273 28 35 chr17 33654420 33654564 -61618087 - ID_B1 SINE B4 -66 158 16 3 841 730 249 27 58 chr17 33654569 33654757 -61617894 - B4A SINE B4 -59 233 52 3 841 192 77 0 0 chr17 33654905 33654931 -61617720 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 3 841 304 290 93 16 chr17 33655157 33655284 -61617367 + MIR SINE MIR 66 196 -72 3 841 768 246 30 30 chr17 33655302 33655495 -61617156 + B4A SINE B4 36 228 -64 3 841 978 249 51 5 chr17 33655495 33655709 -61616942 + ID_B1 SINE B4 1 224 0 3 841 688 243 7 20 chr17 33655715 33655829 -61616822 + B1_Mus1 SINE Alu 2 115 -33 3 841 318 203 348 32 chr17 33655829 33655987 -61616664 + B3 SINE B2 2 209 -7 3 841 688 243 7 20 chr17 33655987 33656019 -61616632 + B1_Mus1 SINE Alu 116 146 -2 3 841 473 310 51 92 chr17 33656019 33656080 -61616571 + B4 SINE B4 199 288 -4 3 841 392 303 41 21 chr17 33656377 33656399 -61616252 + B1F SINE Alu 1 148 -1 3 841 509 252 8 32 chr17 33656399 33656522 -61616129 + ID_B1 SINE B4 105 224 0 3 841 2636 194 77 20 chr17 33656661 33657301 -61615350 + Lx9 LINE L1 6956 7631 -13 3 841 480 306 71 42 chr17 33657333 33657643 -61615008 - L2a LINE L2 -81 3345 3027 3 841 4676 102 30 62 chr17 33657646 33658482 -61614169 + RMER17D2 LTR ERVK 1 809 0 3 841 991 181 80 0 chr17 33658849 33659048 -61613603 + B3 SINE B2 2 216 0 3 841 184 361 14 0 chr17 33659084 33659156 -61613495 + MIRc SINE MIR 3 75 -193 3 841 192 377 0 0 chr17 33659568 33659629 -61613022 - MIRb SINE MIR -170 98 38 3 841 191 254 46 31 chr17 33660061 33660126 -61612525 - MIRb SINE MIR -93 175 110 3 841 199 234 21 0 chr17 33660251 33660298 -61612353 - L3b LINE CR1 -291 191 144 3 841 305 257 102 28 chr17 33660432 33660540 -61612111 + L2b LINE L2 3250 3365 -10 3 841 274 396 0 0 chr17 33660725 33660884 -61611767 + C-rich Low_complexity Low_complexity 1 159 0 3 841 198 143 0 0 chr17 33660982 33661017 -61611634 + (CGG)n Simple_repeat Simple_repeat 2 36 0 3 841 495 0 0 0 chr17 33662445 33662500 -61610151 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 841 29 0 0 0 chr17 33663020 33663049 -61609602 + AT_rich Low_complexity Low_complexity 1 29 0 3 841 787 261 23 55 chr17 33663049 33663268 -61609383 - B3A SINE B2 -2 214 3 3 841 597 229 25 0 chr17 33663808 33663926 -61608725 + RSINE1 SINE B4 12 132 -33 3 841 351 176 149 0 chr17 33664036 33664110 -61608541 + B1_Mur3 SINE Alu 1 85 -64 3 841 647 241 13 52 chr17 33664479 33664632 -61608019 - MTE2b LTR MaLR 0 379 233 3 841 354 45 0 0 chr17 33664690 33664734 -61607917 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 841 555 294 50 22 chr17 33664759 33664898 -61607753 - RSINE1 SINE B4 -18 147 5 3 841 301 263 0 38 chr17 33664928 33665007 -61607644 - MTE2b LTR MaLR -268 111 36 3 841 626 223 25 22 chr17 33666187 33666322 -61606329 + RSINE1 SINE B4 13 136 -29 3 841 464 321 55 61 chr17 33666452 33666700 -61605951 + B4A SINE B4 1 276 -16 3 841 420 20 0 0 chr17 33666721 33666770 -61605881 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 841 354 265 23 93 chr17 33666781 33666830 -61605821 + PB1D9 SINE Alu 1 120 0 3 841 365 262 25 0 chr17 33666830 33666910 -61605741 + ID_B1 SINE B4 143 224 0 3 841 323 268 40 40 chr17 33666928 33667029 -61605622 + BC1_Mm scRNA scRNA 15 115 -37 3 841 351 0 0 0 chr17 33667701 33667740 -61604911 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 841 508 231 0 37 chr17 33667753 33667861 -61604790 + Lx6 LINE L1 7205 7308 -152 3 841 931 285 19 23 chr17 33667937 33668203 -61604448 + B4A SINE B4 3 267 -25 3 841 950 175 69 0 chr17 33669001 33669190 -61603461 - URR1A DNA MER1_type -9 217 16 3 841 262 270 75 0 chr17 33669320 33669405 -61603246 + PB1D10 SINE Alu 22 115 -34 3 841 428 254 116 127 chr17 33669434 33669569 -61603082 + B3A SINE B2 8 153 -42 3 841 186 43 0 0 chr17 33669569 33669592 -61603059 + (CATA)n Simple_repeat Simple_repeat 4 26 0 3 841 244 254 116 127 chr17 33669592 33669619 -61603032 + B2_Mm2 SINE B2 154 171 -24 3 841 941 127 35 0 chr17 33669619 33669761 -61602890 - B1_Mur3 SINE Alu -1 148 2 3 841 244 254 116 127 chr17 33669761 33669786 -61602865 + B2_Mm2 SINE B2 172 194 -1 3 841 301 229 49 0 chr17 33669879 33669940 -61602711 + B4 SINE B4 1 64 -228 3 841 1053 47 0 144 chr17 33669952 33670125 -61602526 + B1_Mus1 SINE Alu 1 148 0 3 841 182 125 50 0 chr17 33670125 33670158 -61602493 + A-rich Low_complexity Low_complexity 8 42 0 3 841 470 297 99 20 chr17 33670160 33670311 -61602340 + RSINE1 SINE B4 3 165 0 3 841 792 289 14 24 chr17 33670327 33670536 -61602115 + B4A SINE B4 82 288 -4 3 841 682 156 89 8 chr17 33670684 33670807 -61601844 + B1_Mur2 SINE Alu 17 149 0 3 841 225 277 76 51 chr17 33670706 33670824 -61601827 + RLTR25B LTR ERVK 441 561 -467 3 841 372 343 57 0 chr17 33670842 33670982 -61601669 - MER2 DNA MER2_type -1 344 197 3 841 357 87 421 28 chr17 33671142 33671249 -61601402 - B2_Mm2 SINE B2 0 195 47 3 841 1132 126 11 22 chr17 33671296 33671475 -61601176 - B2_Mm1t SINE B2 -14 179 3 3 841 783 257 111 107 chr17 33671476 33671524 -61601127 - B4A SINE B4 -35 257 229 3 841 887 194 69 5 chr17 33671524 33671726 -61600925 - B3 SINE B2 -1 215 1 3 841 783 257 111 107 chr17 33671726 33671930 -61600721 - B4A SINE B4 -64 228 4 3 841 472 285 73 34 chr17 33671986 33672164 -61600487 - ID_B1 SINE B4 -1 223 39 3 841 401 276 145 8 chr17 33672340 33672457 -61600194 + RSINE1 SINE B4 4 136 -29 3 841 938 61 292 0 chr17 33672551 33672698 -61599953 - B2_Mm2 SINE B2 -5 190 1 3 841 189 333 38 25 chr17 33673159 33673239 -61599412 + MIRb SINE MIR 182 262 -6 3 841 277 290 14 0 chr17 33673269 33673338 -61599313 - B4A SINE B4 -3 289 220 3 841 291 211 94 62 chr17 33673350 33673446 -61599205 - Lx8 LINE L1 -2 7471 7373 3 841 344 247 148 72 chr17 33673450 33673477 -61599174 - B4 SINE B4 -44 248 168 3 841 537 180 144 0 chr17 33673477 33673588 -61599063 - B1_Mur1 SINE Alu -6 143 17 3 841 344 247 148 72 chr17 33673588 33673618 -61599033 - B4 SINE B4 -44 167 69 3 841 492 250 9 0 chr17 33673647 33673759 -61598892 - Lx8 LINE L1 -201 7272 7160 3 841 595 205 213 76 chr17 33673759 33673970 -61598681 - B4A SINE B4 -47 245 6 3 841 198 0 0 0 chr17 33675483 33675505 -61597146 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 3 841 1048 253 63 26 chr17 33675875 33676143 -61596508 + B4 SINE B4 1 278 -14 3 841 633 182 7 105 chr17 33676494 33676647 -61596004 + B1_Mur1 SINE Alu 5 142 -7 3 841 259 354 0 12 chr17 33676662 33676742 -61595909 + B4A SINE B4 6 84 -208 3 841 229 154 19 19 chr17 33676810 33676863 -61595788 + B4A SINE B4 194 246 -46 3 841 627 219 107 23 chr17 33677210 33677341 -61595310 - B1_Mur1 SINE Alu -1 148 7 3 841 1385 85 0 11 chr17 33677352 33677543 -61595108 - B2_Mm2 SINE B2 -6 189 1 3 841 236 250 176 27 chr17 33677793 33677867 -61594784 - RSINE1 SINE B4 -76 89 5 3 841 258 321 0 68 chr17 33677910 33678027 -61594624 - B3A SINE B2 -5 193 85 3 841 276 353 48 29 chr17 33678253 33678358 -61594293 - B4 SINE B4 -141 151 45 3 841 284 225 437 7 chr17 33678392 33678533 -61594118 + ID_B1 SINE B4 1 203 -21 4 841 237 331 110 40 chr17 33679735 33679787 -61592864 - B2_Mm2 SINE B2 -2 193 11 4 841 603 227 25 0 chr17 33679787 33679906 -61592745 - RSINE1 SINE B4 -32 133 12 4 841 404 238 87 19 chr17 33681572 33681675 -61590976 + PB1D10 SINE Alu 1 110 -7 4 841 390 21 0 0 chr17 33682807 33682854 -61589797 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 841 652 211 8 8 chr17 33682939 33683068 -61589583 - MTE2b LTR MaLR -250 129 1 4 841 708 161 62 55 chr17 33683469 33683614 -61589037 + B1_Mus1 SINE Alu 3 148 0 4 841 333 62 0 0 chr17 33683629 33683677 -61588974 + (CAGA)n Simple_repeat Simple_repeat 2 49 0 4 841 701 206 23 0 chr17 33683793 33683924 -61588727 - B1_Mur2 SINE Alu -13 136 3 4 841 1397 84 16 10 chr17 33684013 33684206 -61588445 + B2_Mm2 SINE B2 1 194 -1 4 841 204 97 0 0 chr17 33684207 33684238 -61588413 + (GAGAA)n Simple_repeat Simple_repeat 5 35 0 4 841 273 316 0 13 chr17 33684240 33684317 -61588334 + B4 SINE B4 216 291 -1 4 841 310 342 26 9 chr17 33684929 33685044 -61587607 + MIRb SINE MIR 43 159 -109 4 841 2155 92 9 62 chr17 33685070 33685406 -61587245 - ORR1A3 LTR MaLR -8 318 1 4 841 220 246 188 0 chr17 33685418 33685487 -61587164 + RSINE1 SINE B4 43 124 -41 4 105 306 0 0 0 chr17 33685493 33685527 -61587124 + (TC)n Simple_repeat Simple_repeat 1 34 0 4 842 225 108 0 0 chr17 33685534 33685571 -61587080 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 842 516 287 39 111 chr17 33686738 33686891 -61585760 + ID_B1 SINE B4 84 225 -67 4 842 466 266 101 111 chr17 33686900 33687099 -61585552 + B3A SINE B2 8 204 -12 4 842 366 211 0 14 chr17 33688521 33688593 -61584058 - RSINE1 SINE B4 -22 143 73 4 842 690 288 30 0 chr17 33688596 33688794 -61583857 - ID_B1 SINE B4 -19 205 2 4 842 257 232 0 0 chr17 33688996 33689065 -61583586 + T-rich Low_complexity Low_complexity 1 69 0 4 842 302 175 179 85 chr17 33689067 33689173 -61583478 - PB1D10 SINE Alu -1 116 1 4 842 292 360 56 8 chr17 33689510 33689636 -61583015 + B1F SINE Alu 18 149 0 4 842 440 225 8 77 chr17 33689689 33689819 -61582832 + RSINE1 SINE B4 45 165 0 4 842 213 343 127 6 chr17 33689839 33690012 -61582639 - MIRc SINE MIR -73 195 2 4 842 183 158 0 26 chr17 33690092 33690131 -61582520 + L3 LINE CR1 778 815 -3674 4 842 722 248 51 6 chr17 33690794 33690952 -61581699 + RSINE1 SINE B4 1 165 0 4 842 400 259 96 7 chr17 33691518 33691654 -61580997 + B1_Mur1 SINE Alu 2 149 0 4 842 431 263 88 22 chr17 33691702 33691838 -61580813 + B3A SINE B2 4 148 -50 4 842 732 88 0 0 chr17 33691844 33691958 -61580693 + (TC)n Simple_repeat Simple_repeat 1 114 0 4 842 437 328 98 26 chr17 33691983 33692232 -61580419 + B4A SINE B4 42 291 -1 4 842 259 243 67 13 chr17 33693312 33693387 -61579264 + ID4_ SINE ID 1 79 -4 4 842 203 301 12 35 chr17 33693465 33693551 -61579100 + GA-rich Low_complexity Low_complexity 3 86 0 4 842 567 111 10 0 chr17 33693551 33693650 -61579001 + L1_Mus3 LINE L1 6539 6638 0 4 842 486 49 0 0 chr17 33693650 33693711 -61578940 + (GGAA)n Simple_repeat Simple_repeat 1 61 0 4 842 728 251 82 0 chr17 33694138 33694333 -61578318 + ID_B1 SINE B4 1 211 -13 4 842 434 62 0 15 chr17 33694339 33694389 -61578262 + (GGA)n Simple_repeat Simple_repeat 3 52 0 4 842 1241 70 12 0 chr17 33694389 33694561 -61578090 + (GAAA)n Simple_repeat Simple_repeat 1 174 0 4 842 434 62 0 15 chr17 33694561 33694575 -61578076 + (GGA)n Simple_repeat Simple_repeat 2 14 0 4 842 351 191 0 0 chr17 33694739 33694802 -61577849 + PB1D10 SINE Alu 55 117 0 4 842 705 244 97 0 chr17 33694814 33694990 -61577661 + ID_B1 SINE B4 12 204 -20 4 842 678 269 24 77 chr17 33695411 33695620 -61577031 - B3A SINE B2 0 198 1 4 842 784 240 86 5 chr17 33695643 33695840 -61576811 - ID_B1 SINE B4 -9 215 3 4 842 555 273 39 0 chr17 33695846 33695974 -61576677 - ID_B1 SINE B4 -8 216 84 4 842 831 283 68 32 chr17 33696199 33696480 -61576171 - B4A SINE B4 0 292 2 4 842 565 310 23 0 chr17 33696533 33696662 -61575989 - RSINE1 SINE B4 -32 133 2 4 842 324 70 0 0 chr17 33696735 33696778 -61575873 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 4 842 366 201 7 5 chr17 33696778 33696868 -61575783 - PB1D10 SINE Alu -50 99 9 4 842 266 290 14 93 chr17 33696800 33696906 -61575745 - ID_B1 SINE B4 -67 157 61 4 842 666 183 207 0 chr17 33697286 33697450 -61575201 + Lx5 LINE L1 6840 7037 -13 4 842 675 108 0 0 chr17 33697451 33697553 -61575098 + (GGAA)n Simple_repeat Simple_repeat 1 102 0 4 842 594 261 77 7 chr17 33697554 33697712 -61574939 + B3A SINE B2 28 193 -5 4 842 1152 45 0 0 chr17 33697712 33697846 -61574805 + B1_Mm SINE Alu 1 134 -13 4 842 210 71 0 0 chr17 33697846 33697874 -61574777 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 4 842 432 330 54 27 chr17 33697874 33697898 -61574753 + B3 SINE B2 193 215 -1 4 842 661 272 126 0 chr17 33697970 33698161 -61574490 + ID_B1 SINE B4 1 215 -9 4 842 1174 75 0 0 chr17 33698188 33698335 -61574316 - B1_Mus1 SINE Alu 0 148 2 4 842 647 259 58 0 chr17 33698384 33698523 -61574128 - RSINE1 SINE B4 -14 151 5 4 842 216 86 0 0 chr17 33698660 33698695 -61573956 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 842 27 29 0 0 chr17 33698807 33698841 -61573810 + AT_rich Low_complexity Low_complexity 1 34 0 4 842 182 152 30 0 chr17 33700871 33700904 -61571747 - L3 LINE CR1 -630 3859 3826 4 842 1096 188 47 0 chr17 33701083 33701275 -61571376 - B3 SINE B2 0 216 16 4 842 770 277 94 5 chr17 33701306 33701498 -61571153 - ID_B1 SINE B4 -9 215 7 4 842 350 287 68 126 chr17 33701855 33702046 -61570605 + B3A SINE B2 3 182 -16 4 842 216 97 0 0 chr17 33702050 33702081 -61570570 + (CATA)n Simple_repeat Simple_repeat 3 33 0 4 842 883 254 24 38 chr17 33702119 33702328 -61570323 + ID_B1 SINE B4 8 213 -11 4 842 267 214 14 28 chr17 33702404 33702476 -61570175 + (TA)n Simple_repeat Simple_repeat 2 72 0 4 842 523 206 39 10 chr17 33702481 33702584 -61570067 - B1_Mur1 SINE Alu -26 123 18 4 842 276 256 21 104 chr17 33702498 33702594 -61570057 - MT2B LTR ERVL -341 260 173 4 842 541 288 12 56 chr17 33702614 33702776 -61569875 + RSINE1 SINE B4 5 159 -6 4 842 278 321 111 41 chr17 33702622 33702794 -61569857 + B3A SINE B2 12 195 -3 4 842 395 267 38 9 chr17 33702916 33703022 -61569629 + B1F SINE Alu 32 140 -9 4 842 985 214 25 15 chr17 33703799 33704042 -61568609 + ZP3AR Satellite Satellite 1 245 0 4 842 311 167 29 57 chr17 33704042 33704112 -61568539 + ID4_ SINE ID 1 68 -15 4 842 2885 65 35 20 chr17 33704940 33705088 -61567563 - MTB LTR MaLR 0 400 245 4 842 3496 30 2 0 chr17 33705088 33705483 -61567168 - MTA_Mm LTR MaLR 0 396 1 4 842 9843 16 0 0 chr17 33705483 33706581 -61566070 - MTA_Mm-int LTR MaLR 0 1098 1 4 842 3533 23 2 0 chr17 33706581 33706976 -61565675 - MTA_Mm LTR MaLR 0 396 1 4 842 2885 65 35 20 chr17 33706976 33707219 -61565432 - MTB LTR MaLR -156 244 3 4 842 836 244 40 25 chr17 33707335 33707533 -61565118 - ID_B1 SINE B4 -6 218 18 4 842 431 336 119 25 chr17 33707642 33707886 -61564765 - B4A SINE B4 -23 269 3 4 842 411 259 33 11 chr17 33707901 33707991 -61564660 - PB1D7 SINE Alu 0 120 29 4 842 203 0 0 36 chr17 33708072 33708100 -61564551 + (GTTTG)n Simple_repeat Simple_repeat 2 28 0 4 842 1193 75 0 0 chr17 33708143 33708290 -61564361 + B1_Mus1 SINE Alu 2 148 0 4 842 26 30 0 0 chr17 33708290 33708323 -61564328 + AT_rich Low_complexity Low_complexity 1 33 0 4 842 278 225 61 0 chr17 33708421 33708514 -61564137 + B1_Mur4 SINE Alu 9 108 -12 4 842 329 203 0 0 chr17 33708607 33708666 -61563985 + ID4 SINE ID 3 61 -22 4 842 271 286 0 0 chr17 33708613 33708683 -61563968 + tRNA-Ala-GCY_ tRNA tRNA 3 72 -3 4 842 1623 205 18 95 chr17 33708887 33708956 -61563695 - ORR1D2 LTR MaLR 0 370 307 4 842 856 210 192 40 chr17 33708956 33709278 -61563373 + ORR1D1 LTR MaLR 1 371 -3 4 842 1623 205 18 95 chr17 33709278 33709607 -61563044 - ORR1D2 LTR MaLR -64 306 3 4 842 231 252 149 112 chr17 33709648 33709809 -61562842 - MTEb LTR MaLR -8 371 205 4 842 629 313 30 25 chr17 33709826 33710029 -61562622 + ID_B1 SINE B4 20 223 -1 4 842 243 88 0 0 chr17 33710029 33710063 -61562588 + (GGAA)n Simple_repeat Simple_repeat 2 35 0 4 842 348 24 0 0 chr17 33710145 33710186 -61562465 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 842 297 0 0 0 chr17 33710200 33710233 -61562418 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 4 842 572 279 43 7 chr17 33710241 33710382 -61562269 - RSINE1 SINE B4 -17 148 3 4 842 716 236 0 8 chr17 33710382 33710510 -61562141 - B1F2 SINE Alu -6 143 17 4 842 1424 256 92 89 chr17 33710611 33710703 -61561948 - RLTR18 LTR ERVK -11 605 515 4 842 794 207 0 7 chr17 33710703 33710854 -61561797 + B1_Mur4 SINE Alu 1 150 0 4 842 1424 256 92 89 chr17 33710854 33711356 -61561295 - RLTR18 LTR ERVK -102 514 9 4 842 420 248 45 90 chr17 33711367 33711500 -61561151 + ID_B1 SINE B4 94 220 -4 4 842 333 286 65 35 chr17 33711596 33711738 -61560913 - MTEa LTR MaLR -6 373 220 4 842 963 163 30 6 chr17 33711872 33712039 -61560612 - MTE2a LTR MaLR -8 371 201 4 842 676 192 0 8 chr17 33712046 33712167 -61560484 + B1_Mur1 SINE Alu 9 128 -21 4 842 364 213 29 206 chr17 33712323 33712459 -61560192 - MTE2a LTR MaLR -266 113 2 4 842 1008 109 13 20 chr17 33712460 33712610 -61560041 + B1_Mur4 SINE Alu 2 150 0 5 842 243 0 0 0 chr17 33712707 33712734 -61559917 + (CCCCCA)n Simple_repeat Simple_repeat 1 27 0 5 842 968 299 54 14 chr17 33713857 33714135 -61558516 + B4A SINE B4 2 290 -2 5 842 22 35 0 0 chr17 33714207 33714236 -61558415 + AT_rich Low_complexity Low_complexity 1 29 0 5 842 580 214 119 40 chr17 33714241 33714392 -61558259 - RSINE1 SINE B4 0 165 3 5 842 572 179 228 0 chr17 33714439 33714562 -61558089 - RSINE1 SINE B4 -13 152 2 5 842 885 258 5 23 chr17 33714603 33714821 -61557830 - B3 SINE B2 -2 214 1 5 842 200 189 0 0 chr17 33714932 33714969 -61557682 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 5 842 312 218 0 0 chr17 33715333 33715420 -61557231 + (CA)n Simple_repeat Simple_repeat 2 88 0 5 842 444 180 0 213 chr17 33715535 33715616 -61557035 - B4A SINE B4 -6 286 224 5 842 703 239 48 19 chr17 33715616 33715825 -61556826 - B3 SINE B2 0 216 2 5 842 444 180 0 213 chr17 33715825 33715870 -61556781 - B4A SINE B4 -69 223 187 5 842 727 286 60 10 chr17 33715874 33716051 -61556600 + B4A SINE B4 46 232 -60 5 842 215 194 175 16 chr17 33716051 33716114 -61556537 + B2_Mm2 SINE B2 1 73 -122 5 842 566 316 35 6 chr17 33716107 33716276 -61556375 + B4A SINE B4 115 288 -4 5 842 656 230 95 0 chr17 33716512 33716660 -61555991 + RSINE1 SINE B4 4 165 0 5 842 352 291 0 0 chr17 33717270 33717356 -61555295 - MIR SINE MIR -57 151 66 5 842 1158 89 0 0 chr17 33717406 33717552 -61555099 + B1_Mm SINE Alu 1 146 -1 5 842 831 286 20 15 chr17 33717560 33717762 -61554889 + B4 SINE B4 27 229 -63 5 842 292 300 78 56 chr17 33717765 33718033 -61554618 + B4 SINE B4 5 278 -14 5 842 255 61 0 0 chr17 33718057 33718090 -61554561 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 842 306 0 0 0 chr17 33718240 33718274 -61554377 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 842 1282 34 0 0 chr17 33718372 33718519 -61554132 + B1_Mus2 SINE Alu 1 147 0 5 842 363 96 0 0 chr17 33718519 33718571 -61554080 + (A)n Simple_repeat Simple_repeat 1 52 0 5 842 718 291 111 0 chr17 33718572 33718761 -61553890 + B4 SINE B4 81 290 -2 5 842 397 258 97 0 chr17 33719734 33719827 -61552824 + PB1D10 SINE Alu 1 102 -15 5 842 529 276 118 0 chr17 33719849 33719976 -61552675 - B1_Mur1 SINE Alu -2 147 6 5 842 411 323 75 19 chr17 33719976 33719989 -61552662 - B4 SINE B4 -68 223 75 5 842 374 253 0 0 chr17 33719989 33720068 -61552583 + B4 SINE B4 2 80 -212 5 842 243 271 47 0 chr17 33720099 33720184 -61552467 + (CATG)n Simple_repeat Simple_repeat 2 90 0 5 842 501 319 19 6 chr17 33720184 33720345 -61552306 - RSINE1 SINE B4 0 165 3 5 842 420 320 115 0 chr17 33720371 33720493 -61552158 + RSINE1 SINE B4 23 158 -7 5 842 183 129 0 0 chr17 33720498 33720529 -61552122 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 842 774 196 147 12 chr17 33721092 33721262 -61551389 + ID_B1 SINE B4 4 196 -28 5 842 673 163 104 37 chr17 33721367 33721501 -61551150 + B1_Mur2 SINE Alu 1 143 -6 5 842 611 160 0 17 chr17 33721501 33721675 -61550976 + GA-rich Low_complexity Low_complexity 1 170 0 5 842 241 356 56 37 chr17 33721843 33721951 -61550700 - LTR16C LTR ERVL 0 489 380 5 842 1071 204 38 9 chr17 33721979 33722192 -61550459 + ID_B1 SINE B4 5 223 -1 5 842 829 171 73 0 chr17 33722201 33722365 -61550286 + Lx5 LINE L1 6871 7046 -4 5 842 201 367 0 12 chr17 33722879 33722959 -61549692 + GA-rich Low_complexity Low_complexity 4 82 0 5 842 1239 34 0 0 chr17 33723584 33723730 -61548921 + B1_Mus2 SINE Alu 2 147 0 5 842 1294 98 16 0 chr17 33723947 33724130 -61548521 + B2_Mm1t SINE B2 1 186 -7 5 842 252 217 333 0 chr17 33724206 33724275 -61548376 + ID_B1 SINE B4 99 190 -34 5 842 607 198 16 23 chr17 33724271 33724400 -61548251 + B1_Mur1 SINE Alu 21 148 -1 5 842 376 257 234 39 chr17 33724413 33724599 -61548052 + B4A SINE B4 1 223 -69 5 842 522 0 0 0 chr17 33724599 33724657 -61547994 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 842 376 257 234 39 chr17 33724657 33724701 -61547950 + B4A SINE B4 224 275 -17 5 842 263 294 106 0 chr17 33725274 33725359 -61547292 + BC1_Mm scRNA scRNA 6 99 -53 5 842 1426 22 0 22 chr17 33725361 33725545 -61547106 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 5 842 984 41 0 0 chr17 33725546 33725667 -61546984 + (GAGAA)n Simple_repeat Simple_repeat 1 121 0 5 842 1199 89 17 17 chr17 33725667 33725839 -61546812 + B2_Mm2 SINE B2 3 174 -21 5 842 435 119 324 18 chr17 33725878 33725989 -61546662 + B2_Mm2 SINE B2 47 191 -4 5 842 815 55 9 0 chr17 33725989 33726098 -61546553 + (GGAGA)n Simple_repeat Simple_repeat 5 114 0 5 842 472 195 0 0 chr17 33726398 33726475 -61546176 - B4 SINE B4 -215 77 1 5 842 702 187 49 28 chr17 33726563 33726706 -61545945 - B1_Mur1 SINE Alu 0 149 4 5 842 198 174 0 0 chr17 33726785 33726831 -61545820 + T-rich Low_complexity Low_complexity 1 46 0 5 842 1232 48 7 0 chr17 33726833 33726980 -61545671 - B1_Mus1 SINE Alu 0 148 1 5 842 815 276 23 0 chr17 33727029 33727243 -61545408 - ID_B1 SINE B4 -5 219 1 5 842 684 226 7 15 chr17 33727288 33727423 -61545228 + B1_Mur4 SINE Alu 12 145 -5 5 842 584 192 29 9 chr17 33727429 33727534 -61545117 - ID_B1 SINE B4 -37 187 81 5 842 1249 41 0 0 chr17 33728001 33728148 -61544503 + B1_Mus2 SINE Alu 1 147 0 5 842 273 75 0 0 chr17 33728148 33728188 -61544463 + (A)n Simple_repeat Simple_repeat 1 40 0 5 842 309 309 135 14 chr17 33728254 33728395 -61544256 - HAL1-3A_ME LINE L1 -417 2441 2284 5 842 221 289 22 22 chr17 33728397 33728489 -61544162 + CT-rich Low_complexity Low_complexity 4 95 0 5 842 296 261 0 28 chr17 33728489 33728560 -61544091 - ID4_ SINE ID -10 73 5 5 842 1092 268 80 28 chr17 33728568 33729033 -61543618 - L1MB3 LINE L1 -2 6181 5693 5 842 275 24 71 0 chr17 33729286 33729328 -61543323 + (TCTCTG)n Simple_repeat Simple_repeat 4 48 0 5 842 207 0 0 0 chr17 33729329 33729352 -61543299 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 842 227 377 0 0 chr17 33729426 33729495 -61543156 - L2b LINE L2 -2 3373 3305 5 842 347 221 17 119 chr17 33729504 33729622 -61543029 + MT2B LTR ERVL 157 262 -339 5 842 769 139 0 32 chr17 33729534 33729654 -61542997 + B1_Mur4 SINE Alu 23 139 -11 5 842 186 43 0 0 chr17 33729654 33729677 -61542974 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 842 590 317 0 6 chr17 33730112 33730277 -61542374 + RSINE1 SINE B4 2 165 0 5 842 296 342 35 9 chr17 33730543 33730658 -61541993 + PB1D7 SINE Alu 2 119 -1 5 842 188 133 67 0 chr17 33730716 33730776 -61541875 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 5 842 267 296 51 94 chr17 33730800 33730938 -61541713 - RMER12 LTR ERVK -489 833 702 5 842 335 266 6 149 chr17 33731348 33731504 -61541147 + RSINE1 SINE B4 20 152 -13 5 842 1023 54 0 0 chr17 33731504 33731634 -61541017 + (TC)n Simple_repeat Simple_repeat 1 130 0 5 842 335 266 6 149 chr17 33731634 33731645 -61541006 + RSINE1 SINE B4 153 163 -2 5 842 231 196 0 0 chr17 33731650 33731701 -61540950 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 842 529 269 10 136 chr17 33731788 33731986 -61540665 + ID_B1 SINE B4 4 176 -48 5 842 314 231 64 89 chr17 33731898 33732055 -61540596 + MT2B2 LTR ERVL 175 327 -257 5 842 393 275 60 15 chr17 33732057 33732190 -61540461 + MIRb SINE MIR 114 252 -16 5 842 246 286 13 0 chr17 33732302 33732379 -61540272 + CT-rich Low_complexity Low_complexity 6 83 0 5 842 234 159 43 0 chr17 33732380 33732449 -61540202 + (TA)n Simple_repeat Simple_repeat 2 73 0 5 842 503 231 35 76 chr17 33732481 33732626 -61540025 + ZP3AR Satellite Satellite 3 141 -71 5 842 246 279 49 37 chr17 33732574 33732656 -61539995 + ID2 SINE ID 1 83 0 5 842 2135 99 18 27 chr17 33732694 33733026 -61539625 + Lx LINE L1 6320 6648 -6 5 842 320 232 23 47 chr17 33733032 33733118 -61539533 + PB1D7 SINE Alu 21 104 -16 5 842 570 224 153 20 chr17 33733409 33733605 -61539046 - ID_B1 SINE B4 -2 222 1 5 842 332 273 111 0 chr17 33733641 33733740 -61538911 + PB1D10 SINE Alu 2 111 -6 5 842 1382 81 16 16 chr17 33733751 33733939 -61538712 + B2_Mm2 SINE B2 1 188 -7 5 842 624 156 163 8 chr17 33734076 33734192 -61538459 - B1_Mur1 SINE Alu 0 149 15 5 842 641 250 21 0 chr17 33734192 33734336 -61538315 + B1_Mur2 SINE Alu 1 147 -2 5 842 1204 185 14 32 chr17 33734362 33734580 -61538071 - B3 SINE B2 -2 214 1 5 842 954 237 31 10 chr17 33734638 33734834 -61537817 + ID_B1 SINE B4 4 203 -21 5 842 827 270 61 3 chr17 33735490 33735735 -61536916 + ID_B1 SINE B4 12 286 -6 5 842 596 211 52 33 chr17 33736078 33736230 -61536421 + RSINE1 SINE B4 2 163 -2 5 842 302 264 14 53 chr17 33736325 33736444 -61536207 - PB1D10 SINE Alu -22 127 11 5 842 222 225 0 0 chr17 33736444 33736484 -61536167 - B1F1 SINE Alu -99 50 11 5 842 227 219 0 0 chr17 33736483 33736524 -61536127 - B1F1 SINE Alu -98 51 11 5 842 242 209 0 0 chr17 33736523 33736566 -61536085 - B1F1 SINE Alu -98 51 9 5 842 308 304 68 77 chr17 33736780 33737001 -61535650 - RMER2 LTR ERV1 -5 562 344 5 842 529 312 37 26 chr17 33737331 33737522 -61535129 - RMER15 LTR ERVL -1 574 382 6 842 528 284 90 27 chr17 33737523 33737711 -61534940 - Lx8 LINE L1 -237 7236 7037 6 842 477 0 0 0 chr17 33737711 33737764 -61534887 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 842 210 247 244 13 chr17 33738335 33738413 -61534238 - RSINE1 SINE B4 -17 148 53 6 842 1293 77 38 16 chr17 33739711 33739897 -61532754 + B2_Mm2 SINE B2 2 191 -4 6 842 223 250 0 0 chr17 33740019 33740059 -61532592 + ID4_ SINE ID 14 53 -30 6 842 252 224 35 0 chr17 33740076 33740134 -61532517 + ID_B1 SINE B4 161 220 -4 6 842 279 0 0 0 chr17 33740134 33740165 -61532486 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 842 347 155 127 0 chr17 33740185 33740256 -61532395 + PB1D9 SINE Alu 32 111 -9 6 842 196 213 33 0 chr17 33740282 33740343 -61532308 + GA-rich Low_complexity Low_complexity 1 63 0 6 842 338 325 16 71 chr17 33740359 33740485 -61532166 + RSINE1 SINE B4 47 165 0 6 842 1347 61 8 0 chr17 33740576 33740840 -61531811 + (TGG)n Simple_repeat Simple_repeat 1 266 0 6 842 347 244 68 15 chr17 33740853 33740951 -61531700 - PB1D9 SINE Alu -6 114 8 6 842 694 145 17 8 chr17 33740952 33741070 -61531581 - PB1D9 SINE Alu 0 120 2 6 842 257 242 16 0 chr17 33741888 33741942 -61530709 + B4 SINE B4 2 56 -236 6 842 894 83 0 0 chr17 33741942 33742063 -61530588 + B2_Mm1a SINE B2 2 122 -71 6 842 495 87 0 0 chr17 33742078 33742147 -61530504 + (GA)n Simple_repeat Simple_repeat 2 70 0 6 842 612 279 89 25 chr17 33742150 33742385 -61530266 + B4A SINE B4 43 292 0 6 842 1197 62 7 0 chr17 33742525 33742671 -61529980 + B1_Mus2 SINE Alu 1 147 0 6 842 363 305 0 118 chr17 33743338 33743411 -61529240 + ID SINE ID 22 80 -144 6 842 224 274 176 14 chr17 33743411 33743485 -61529166 + PB1D10 SINE Alu 1 86 -31 6 842 213 389 0 0 chr17 33743599 33743707 -61528944 + (TATG)n Simple_repeat Simple_repeat 4 111 0 6 842 294 284 0 0 chr17 33743612 33743686 -61528965 + (TG)n Simple_repeat Simple_repeat 1 74 0 6 842 307 296 79 0 chr17 33743717 33743835 -61528816 - RSINE1 SINE B4 -11 281 78 6 842 442 336 48 44 chr17 33743870 33744085 -61528566 - B4 SINE B4 -16 208 1 6 842 29 0 0 0 chr17 33744139 33744168 -61528483 + AT_rich Low_complexity Low_complexity 1 29 0 6 842 622 300 17 29 chr17 33744731 33744810 -61527841 + ID SINE ID 1 77 -147 6 842 374 292 45 36 chr17 33744810 33744920 -61527731 + PB1D10 SINE Alu 1 111 -6 6 842 246 62 0 0 chr17 33744921 33744953 -61527698 + (CGTG)n Simple_repeat Simple_repeat 1 32 0 6 842 258 136 0 0 chr17 33744954 33744998 -61527653 + (GGGAGA)n Simple_repeat Simple_repeat 2 45 0 6 842 599 227 21 57 chr17 33745011 33745151 -61527500 - RSINE1 SINE B4 -29 136 2 6 842 200 208 0 20 chr17 33745453 33745502 -61527149 + GA-rich Low_complexity Low_complexity 1 48 0 6 842 409 283 19 48 chr17 33745504 33745608 -61527043 - B1_Mus1 SINE Alu -47 101 1 6 842 38 61 0 0 chr17 33745618 33745684 -61526967 + AT_rich Low_complexity Low_complexity 1 66 0 6 842 1003 160 12 0 chr17 33745698 33745867 -61526784 - Lx9 LINE L1 -179 7465 7295 6 842 1101 188 9 36 chr17 33745981 33746174 -61526477 + B3 SINE B2 1 193 -23 6 842 450 0 0 0 chr17 33746174 33746224 -61526427 + (TA)n Simple_repeat Simple_repeat 1 50 0 6 842 1101 188 9 36 chr17 33746224 33746251 -61526400 + B3 SINE B2 194 214 -2 6 842 597 304 12 0 chr17 33746275 33746436 -61526215 + RSINE1 SINE B4 3 165 0 6 842 294 278 32 32 chr17 33746504 33746597 -61526054 + ID_B1 SINE B4 2 94 -130 6 842 551 270 107 0 chr17 33746642 33746820 -61525831 + ID_B1 SINE B4 7 203 -21 6 842 3268 38 138 5 chr17 33746940 33747359 -61525292 + MT2C_Mm LTR ERVL 1 475 0 6 842 547 36 12 12 chr17 33747492 33747577 -61525074 - L1Md_F2 LINE L1 0 6582 6498 6 842 1232 54 0 0 chr17 33747820 33747967 -61524684 + B1_Mus2 SINE Alu 1 147 0 6 842 243 79 0 0 chr17 33747969 33748007 -61524644 + (A)n Simple_repeat Simple_repeat 1 38 0 6 842 382 333 48 8 chr17 33748027 33748151 -61524500 + ID_B1 SINE B4 43 171 -53 6 842 352 142 0 39 chr17 33748195 33748262 -61524389 - B2_Mm2 SINE B2 -107 109 47 6 842 1296 85 11 38 chr17 33748275 33748459 -61524192 - B2_Mm1t SINE B2 -14 179 1 6 842 318 50 0 0 chr17 33748568 33748608 -61524043 + (TC)n Simple_repeat Simple_repeat 2 41 0 6 842 583 237 40 15 chr17 33748664 33748849 -61523802 - Lx8 LINE L1 -649 7047 6860 6 842 234 62 0 0 chr17 33749119 33749151 -61523500 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 6 842 786 206 7 0 chr17 33749151 33749287 -61523364 - B1_Mur1 SINE Alu -12 137 1 6 842 620 241 15 0 chr17 33749289 33749422 -61523229 - ID_B1 SINE B4 0 224 90 6 842 289 208 27 40 chr17 33749655 33749730 -61522921 - Lx8 LINE L1 -497 6976 6903 6 842 578 238 170 6 chr17 33749753 33749918 -61522733 - B3A SINE B2 -6 192 1 6 842 1537 160 138 0 chr17 33750211 33750493 -61522158 + RMER15 LTR ERVL 34 354 -221 6 842 1752 91 14 54 chr17 33750511 33750791 -61521860 + ORR1A2 LTR MaLR 18 286 -41 6 842 28551 73 13 4 chr17 33750791 33755221 -61517430 + L1Md_F2 LINE L1 479 4950 -933 6 842 2712 28 53 3 chr17 33755221 33755542 -61517109 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 842 56990 22 11 7 chr17 33755542 33761988 -61510663 - IAPEz-int LTR ERVK 0 6481 8 6 842 2951 27 0 3 chr17 33761988 33762326 -61510325 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 842 5045 70 0 2 chr17 33762326 33762969 -61509682 + L1Md_F2 LINE L1 4945 5586 -297 6 842 7887 53 12 10 chr17 33762970 33763963 -61508688 + L1Md_F2 LINE L1 5588 6582 0 6 842 414 74 0 0 chr17 33763963 33764017 -61508634 + ORR1A2 LTR MaLR 273 326 0 6 842 1024 209 32 27 chr17 33764017 33764236 -61508415 + RMER15 LTR ERVL 355 574 -1 6 842 452 328 80 34 chr17 33764240 33764477 -61508174 + B4A SINE B4 33 280 -12 6 842 1221 21 35 0 chr17 33764656 33764798 -61507853 + B1_Mus2 SINE Alu 1 147 0 6 842 549 44 0 0 chr17 33764800 33764868 -61507783 + (GAAA)n Simple_repeat Simple_repeat 2 69 0 6 842 211 200 60 0 chr17 33765031 33765081 -61507570 + L2c LINE L2 3114 3166 -221 6 842 640 293 89 13 chr17 33765474 33765699 -61506952 + B4A SINE B4 47 288 -4 6 842 458 271 0 10 chr17 33765739 33765836 -61506815 + ID_B1 SINE B4 2 97 -127 6 842 203 246 75 30 chr17 33767145 33767212 -61505439 - L2c LINE L2 -18 3369 3300 6 842 427 275 36 108 chr17 33769382 33769549 -61503102 - B3 SINE B2 -4 191 37 6 842 24 0 0 0 chr17 33769587 33769611 -61503040 + AT_rich Low_complexity Low_complexity 1 24 0 6 842 831 191 0 0 chr17 33769922 33770058 -61502593 + B1_Mus2 SINE Alu 4 139 -8 6 842 415 208 69 10 chr17 33770177 33770279 -61502372 + PB1D9 SINE Alu 7 114 -6 6 842 1153 81 0 0 chr17 33770311 33770459 -61502192 + B1_Mus1 SINE Alu 1 148 0 6 842 555 265 37 96 chr17 33770717 33770905 -61501746 + ID_B1 SINE B4 1 177 -47 6 842 636 229 171 61 chr17 33771202 33771448 -61501203 + B4A SINE B4 2 274 -18 6 842 412 289 102 32 chr17 33771896 33772053 -61500598 + B4A SINE B4 125 292 0 6 842 427 294 64 83 chr17 33772895 33773051 -61499600 - RSINE1 SINE B4 -10 155 3 6 842 227 235 117 48 chr17 33773053 33773156 -61499495 - PB1 SINE Alu 0 127 18 6 842 1209 34 7 7 chr17 33773506 33773654 -61498997 - B1_Mus1 SINE Alu 0 148 1 6 842 364 285 220 68 chr17 33773678 33773810 -61498841 - ID_B1 SINE B4 -61 163 12 6 842 265 304 85 21 chr17 33773842 33773936 -61498715 - PB1D10 SINE Alu -15 102 3 6 842 628 233 81 22 chr17 33773952 33774088 -61498563 - B1F1 SINE Alu 0 149 6 6 842 230 372 0 11 chr17 33774144 33774231 -61498420 + MER5B DNA MER1_type 20 105 -73 6 842 199 152 191 29 chr17 33775603 33775671 -61496980 + L3 LINE CR1 3506 3584 -905 6 842 607 290 87 38 chr17 33775844 33776027 -61496624 - B4A SINE B4 -100 192 1 6 842 486 202 64 9 chr17 33776060 33776170 -61496481 + PB1D7 SINE Alu 5 120 0 6 842 210 209 0 44 chr17 33776173 33776218 -61496433 + polypurine Low_complexity Low_complexity 4 46 0 6 842 261 155 56 0 chr17 33776218 33776289 -61496362 + GA-rich Low_complexity Low_complexity 1 75 0 6 842 348 214 0 143 chr17 33776309 33776407 -61496244 + B1_Mus1 SINE Alu 1 84 -64 6 842 643 179 128 0 chr17 33776320 33776437 -61496214 + ID_B1 SINE B4 91 222 -2 6 842 186 43 0 0 chr17 33776446 33776469 -61496182 + (GGA)n Simple_repeat Simple_repeat 3 25 0 6 842 280 203 113 28 chr17 33776495 33776566 -61496085 + ID4 SINE ID 5 81 -2 6 842 243 297 132 0 chr17 33776918 33777009 -61495642 - L2 LINE L2 -685 2734 2632 6 842 348 269 183 0 chr17 33779516 33779620 -61493031 + ID_B1 SINE B4 94 216 -8 6 842 537 187 35 9 chr17 33780099 33780212 -61492439 - B1_Mus1 SINE Alu -1 147 32 6 842 409 216 80 0 chr17 33781287 33781375 -61491276 + B1_Mur2 SINE Alu 3 97 -52 6 842 413 269 29 9 chr17 33784243 33784348 -61488303 + PB1D10 SINE Alu 5 111 -6 6 842 337 193 0 0 chr17 33784387 33784444 -61488207 + ID_B1 SINE B4 101 157 -67 6 842 663 251 82 16 chr17 33784444 33784638 -61488013 + ID_B1 SINE B4 5 211 -13 6 842 315 348 27 0 chr17 33785422 33785534 -61487117 + PB1D9 SINE Alu 4 118 -2 6 842 213 250 24 95 chr17 33785903 33785987 -61486664 + ID4_ SINE ID 2 79 -4 6 842 433 250 17 8 chr17 33786236 33786353 -61486298 - PB1D9 SINE Alu -1 119 2 6 842 512 277 25 43 chr17 33788592 33788746 -61483905 + B3A SINE B2 3 153 -45 6 842 558 0 0 0 chr17 33788746 33788808 -61483843 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 842 924 69 0 0 chr17 33789411 33789541 -61483110 + B1_Mus1 SINE Alu 10 139 -9 6 842 207 0 0 0 chr17 33789541 33789564 -61483087 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 7 842 248 0 31 0 chr17 33790741 33790773 -61481878 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 7 842 192 152 0 0 chr17 33790773 33790806 -61481845 + G-rich Low_complexity Low_complexity 5 37 0 7 842 581 140 9 27 chr17 33791385 33791495 -61481156 + B1_Mur4 SINE Alu 43 150 0 7 842 21 0 0 0 chr17 33791507 33791528 -61481123 + AT_rich Low_complexity Low_complexity 1 21 0 7 842 425 194 51 0 chr17 33791780 33791878 -61480773 - PB1D9 SINE Alu -1 119 17 7 842 1060 65 58 0 chr17 33791882 33792021 -61480630 + B1_Mus2 SINE Alu 1 147 0 7 842 859 167 38 16 chr17 33793314 33793497 -61479154 + B3 SINE B2 24 210 -6 7 842 1449 66 38 0 chr17 33793838 33794021 -61478630 + B2_Mm2 SINE B2 2 191 -4 7 842 703 228 141 0 chr17 33794311 33794495 -61478156 + B3 SINE B2 1 210 -6 7 842 1190 75 0 0 chr17 33794522 33794669 -61477982 + B1_Mus1 SINE Alu 2 148 0 7 842 276 300 0 62 chr17 33795074 33795170 -61477481 - RSINE1 SINE B4 -28 137 48 7 842 240 267 0 0 chr17 33795601 33795661 -61476990 - MIR SINE MIR -92 116 57 7 842 1358 80 15 60 chr17 33796075 33796275 -61476376 + B2_Mm2 SINE B2 1 191 -4 7 842 21 0 0 0 chr17 33796315 33796336 -61476315 + AT_rich Low_complexity Low_complexity 1 21 0 7 842 26 50 0 0 chr17 33796394 33796434 -61476217 + AT_rich Low_complexity Low_complexity 1 40 0 7 842 301 167 0 0 chr17 33797710 33797764 -61474887 - PB1D9 SINE Alu -24 96 43 7 842 455 269 0 9 chr17 33797845 33797950 -61474701 - PB1D10 SINE Alu -5 112 9 7 842 797 196 17 29 chr17 33799112 33799285 -61473366 - ORR1D1 LTR MaLR -7 367 197 7 842 336 123 0 0 chr17 33799287 33799317 -61473334 + (A)n Simple_repeat Simple_repeat 1 30 0 7 842 1271 27 0 0 chr17 33799317 33799464 -61473187 + B1_Mus2 SINE Alu 1 147 0 7 842 336 123 0 0 chr17 33799464 33799490 -61473161 + (A)n Simple_repeat Simple_repeat 1 26 0 7 842 918 40 48 0 chr17 33799511 33799635 -61473016 - B1_Mus1 SINE Alu -13 135 6 7 842 360 266 73 0 chr17 33799637 33799746 -61472905 - ORR1D1 LTR MaLR -166 208 92 7 842 534 250 8 0 chr17 33799743 33799863 -61472788 - RSINE1 SINE B4 -30 135 15 7 842 270 277 12 35 chr17 33799945 33800031 -61472620 + B4A SINE B4 85 168 -124 7 842 517 161 0 0 chr17 33799962 33800049 -61472602 + PB1D9 SINE Alu 15 101 -19 7 842 470 304 22 7 chr17 33800331 33800467 -61472184 + ID_B1 SINE B4 83 220 -4 7 842 313 280 0 53 chr17 33800504 33800617 -61472034 + ID4_ SINE ID 2 108 -44 7 842 383 208 177 0 chr17 33800867 33800963 -61471688 - B3 SINE B2 -103 113 1 7 842 183 42 0 0 chr17 33800971 33800995 -61471656 + (T)n Simple_repeat Simple_repeat 1 24 0 7 842 1154 62 0 0 chr17 33802002 33802146 -61470505 + B1_Mus2 SINE Alu 3 146 -1 7 842 409 259 9 18 chr17 33802826 33802940 -61469711 + PB1D9 SINE Alu 1 113 -7 7 842 250 211 158 0 chr17 33803729 33803786 -61468865 + ID4_ SINE ID 4 69 -14 7 842 338 238 12 24 chr17 33804553 33804635 -61468016 - B3A SINE B2 -114 84 4 7 842 330 257 0 0 chr17 33804766 33804840 -61467811 + PB1D10 SINE Alu 21 94 -23 7 842 492 278 128 64 chr17 33805092 33805357 -61467294 + B4A SINE B4 11 292 0 7 842 300 329 0 0 chr17 33805826 33805908 -61466743 + ID4_ SINE ID 2 83 0 7 842 245 185 169 0 chr17 33807622 33807687 -61464964 + MER45A DNA Tip100 95 170 -8 7 842 216 0 0 0 chr17 33808510 33808534 -61464117 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 7 842 1346 85 16 16 chr17 33809254 33809446 -61463205 - B2_Mm1a SINE B2 -1 192 1 7 842 360 276 28 28 chr17 33810063 33810171 -61462480 - PB1D10 SINE Alu -7 110 3 7 842 21 0 0 0 chr17 33810175 33810196 -61462455 + AT_rich Low_complexity Low_complexity 1 21 0 7 842 183 156 0 0 chr17 33810403 33810435 -61462216 + GA-rich Low_complexity Low_complexity 2 33 0 7 842 33 0 0 0 chr17 33811516 33811549 -61461102 + AT_rich Low_complexity Low_complexity 1 33 0 7 842 431 194 108 0 chr17 33812152 33812245 -61460406 + B1_Mur2 SINE Alu 34 136 -13 7 842 297 0 0 0 chr17 33814766 33814799 -61457852 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 842 455 269 73 15 chr17 33815126 33815262 -61457389 - B3 SINE B2 -25 191 48 7 842 207 0 0 0 chr17 33815356 33815379 -61457272 + (TTG)n Simple_repeat Simple_repeat 2 24 0 7 842 365 191 223 0 chr17 33815379 33815473 -61457178 - B1F2 SINE Alu -11 138 24 7 842 318 292 0 59 chr17 33815480 33815582 -61457069 - RSINE1 SINE B4 0 165 70 7 842 385 189 156 0 chr17 33815787 33815877 -61456774 + B1_Mus1 SINE Alu 1 104 -44 7 842 356 298 158 0 chr17 33816009 33816123 -61456528 - ID_B1 SINE B4 -13 211 80 7 842 1393 86 16 11 chr17 33816131 33816319 -61456332 - B2_Mm2 SINE B2 -5 190 2 7 842 301 351 26 26 chr17 33816372 33816486 -61456165 + RSINE1 SINE B4 26 139 -26 7 843 279 315 14 0 chr17 33816629 33816702 -61455949 - ID4 SINE ID -8 75 2 7 843 235 278 0 0 chr17 33817028 33817082 -61455569 - B1F2 SINE Alu -93 56 3 7 843 392 202 217 9 chr17 33817572 33817687 -61454964 + B1_Mm SINE Alu 7 145 -2 7 843 319 175 0 0 chr17 33818207 33818264 -61454387 + PB1D9 SINE Alu 54 110 -10 7 843 247 276 194 8 chr17 33818331 33818455 -61454196 + B1_Mur1 SINE Alu 2 148 -1 7 843 378 214 103 37 chr17 33819087 33819194 -61453457 + PB1D7 SINE Alu 5 118 -2 7 843 485 176 331 20 chr17 33819195 33819346 -61453305 + B3A SINE B2 1 198 0 7 843 312 260 14 0 chr17 33819348 33819421 -61453230 + ID4 SINE ID 6 79 -4 7 843 955 240 33 33 chr17 33819431 33819646 -61453005 + B3 SINE B2 2 216 0 7 843 772 118 43 4 chr17 33820077 33820212 -61452439 - B1_Mus1 SINE Alu -5 144 9 7 843 328 285 0 60 chr17 33820274 33820397 -61452254 + B1F2 SINE Alu 1 116 -33 7 843 263 180 0 20 chr17 33820512 33820563 -61452088 + ID4_ SINE ID 12 61 -22 7 843 212 339 0 16 chr17 33820650 33820713 -61451938 - ID4_ SINE ID -10 73 12 7 843 414 133 256 0 chr17 33822650 33822740 -61449911 - PB1D9 SINE Alu -6 114 2 7 843 226 271 105 12 chr17 33822814 33822900 -61449751 - PB1D10 SINE Alu -3 114 21 7 843 411 274 96 0 chr17 33822835 33822970 -61449681 - ID_B1 SINE B4 -57 167 20 7 843 612 256 176 45 chr17 33822984 33823343 -61449308 - Lx8 LINE L1 -28 7445 7040 7 843 333 262 175 0 chr17 33823452 33823532 -61449119 - RSINE1 SINE B4 -57 108 15 7 843 202 321 0 0 chr17 33823628 33823681 -61448970 + C-rich Low_complexity Low_complexity 1 53 0 7 843 182 227 23 0 chr17 33824097 33824141 -61448510 + MIRc SINE MIR 112 156 -112 7 843 999 135 7 26 chr17 33824150 33824302 -61448349 + B1_Mur4 SINE Alu 2 150 0 7 843 355 311 47 9 chr17 33824438 33824545 -61448106 + B1F2 SINE Alu 2 112 -37 7 843 1656 155 6 84 chr17 33824951 33825234 -61447417 + ORR1A2 LTR MaLR 1 284 -43 7 843 1115 83 7 0 chr17 33825234 33825379 -61447272 + B1_Mus1 SINE Alu 2 147 -1 7 843 1656 155 6 84 chr17 33825379 33825441 -61447210 + ORR1A2 LTR MaLR 285 319 -8 7 843 405 0 0 0 chr17 33825489 33825534 -61447117 + (TTA)n Simple_repeat Simple_repeat 1 45 0 7 843 352 316 58 22 chr17 33825577 33825601 -61447050 - B4 SINE B4 -70 222 122 7 843 586 187 28 0 chr17 33825601 33825708 -61446943 - B1_Mur2 SINE Alu -39 110 1 7 843 631 191 21 49 chr17 33825707 33825850 -61446801 - B1_Mur1 SINE Alu -2 147 9 7 843 932 191 98 31 chr17 33825866 33826060 -61446591 - B3 SINE B2 -6 210 4 7 843 241 338 15 0 chr17 33826105 33826173 -61446478 + ID4 SINE ID 4 72 -11 7 843 211 93 47 0 chr17 33826183 33826226 -61446425 + (TA)n Simple_repeat Simple_repeat 1 45 0 7 843 186 71 0 0 chr17 33826228 33826256 -61446395 + (GA)n Simple_repeat Simple_repeat 1 28 0 7 843 451 218 29 29 chr17 33826267 33826371 -61446280 + PB1D9 SINE Alu 2 105 -15 7 843 25 31 0 0 chr17 33826395 33826427 -61446224 + AT_rich Low_complexity Low_complexity 1 32 0 7 843 230 328 0 0 chr17 33826431 33826498 -61446153 - ID2 SINE ID -13 70 4 7 843 180 0 0 0 chr17 33826538 33826558 -61446093 + (T)n Simple_repeat Simple_repeat 1 20 0 7 843 1204 54 0 20 chr17 33826558 33826708 -61445943 - B1_Mm SINE Alu 0 147 1 7 843 866 234 14 42 chr17 33826739 33826953 -61445698 + B3 SINE B2 4 211 -5 7 843 335 293 16 39 chr17 33827009 33827137 -61445514 + RSINE1 SINE B4 1 125 -40 7 843 204 40 0 0 chr17 33827146 33827171 -61445480 + (TAA)n Simple_repeat Simple_repeat 2 26 0 7 843 22 70 0 0 chr17 33827172 33827215 -61445436 + AT_rich Low_complexity Low_complexity 1 43 0 7 843 436 276 27 20 chr17 33827283 33827431 -61445220 - B4A SINE B4 -6 286 138 7 843 558 240 8 16 chr17 33827611 33827738 -61444913 + MTE2a LTR MaLR 3 128 -251 7 843 343 216 13 15 chr17 33827736 33827812 -61444839 + MTE2a LTR MaLR 258 362 -57 7 843 2092 71 7 7 chr17 33827812 33828095 -61444556 - L1_Mus3 LINE L1 -4 6634 6352 7 843 248 218 11 133 chr17 33828095 33828108 -61444543 + MTE2a LTR MaLR 363 375 -44 7 843 776 263 31 0 chr17 33828123 33828317 -61444334 - B3 SINE B2 -8 208 9 7 843 272 197 56 14 chr17 33829393 33829465 -61443186 + L1MC1 LINE L1 5715 5789 -544 7 843 523 271 54 77 chr17 33829467 33829635 -61443016 + B4A SINE B4 2 165 -127 8 843 342 175 0 0 chr17 33829651 33829731 -61442920 + (CA)n Simple_repeat Simple_repeat 2 81 0 8 843 2117 107 58 13 chr17 33829732 33830045 -61442606 + ORR1A2 LTR MaLR 1 327 0 8 843 242 106 21 0 chr17 33830053 33830100 -61442551 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 843 253 347 118 71 chr17 33830106 33830317 -61442334 + ID_B1 SINE B4 2 222 -2 8 843 604 235 147 5 chr17 33830396 33830580 -61442071 + L1MC1 LINE L1 5815 6024 -309 7 843 407 212 101 0 chr17 33830623 33830722 -61441929 + ID_B1 SINE B4 109 217 -7 8 843 738 282 26 26 chr17 33830736 33830965 -61441686 + B4 SINE B4 1 229 -63 8 843 216 196 130 0 chr17 33830967 33831013 -61441638 + RSINE1 SINE B4 5 56 -109 8 843 29 0 0 0 chr17 33831134 33831163 -61441488 + AT_rich Low_complexity Low_complexity 1 29 0 8 843 528 306 18 24 chr17 33831169 33831333 -61441318 + RSINE1 SINE B4 3 165 0 8 843 328 284 0 51 chr17 33831362 33831440 -61441211 + B4A SINE B4 219 292 0 8 843 305 291 13 0 chr17 33831486 33831565 -61441086 + ID2 SINE ID 4 83 0 8 843 228 179 35 35 chr17 33831565 33831623 -61441028 + GA-rich Low_complexity Low_complexity 2 59 0 8 843 323 238 35 12 chr17 33832367 33832452 -61440199 - RSINE1 SINE B4 -24 141 55 8 843 186 43 0 0 chr17 33832492 33832515 -61440136 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 8 843 1139 105 0 17 chr17 33832518 33832693 -61439958 - B2_Mm2 SINE B2 -22 173 2 8 843 732 228 25 45 chr17 33833486 33833688 -61438963 + B3A SINE B2 1 198 0 8 843 732 156 10 22 chr17 33833691 33833832 -61438819 - B1_Mur2 SINE Alu -1 148 7 8 843 774 32 0 0 chr17 33833863 33833956 -61438695 + (TG)n Simple_repeat Simple_repeat 2 94 0 8 843 248 280 226 0 chr17 33833998 33834091 -61438560 - PB1D7 SINE Alu -6 114 1 8 843 352 301 45 99 chr17 33834114 33834335 -61438316 + ID_B1 SINE B4 5 213 -11 8 843 1275 219 161 6 chr17 33834352 33834674 -61437977 + ORR1D1 LTR MaLR 2 373 -1 8 843 195 222 0 0 chr17 33834694 33834739 -61437912 + (CGTG)n Simple_repeat Simple_repeat 3 47 0 8 843 658 230 16 44 chr17 33834740 33834922 -61437729 - B3A SINE B2 -17 181 5 8 843 248 178 0 0 chr17 33834977 33835022 -61437629 + ID4_ SINE ID 17 61 -22 8 843 837 265 22 14 chr17 33835177 33835399 -61437252 - ID_B1 SINE B4 0 224 1 8 843 373 186 46 11 chr17 33835399 33835486 -61437165 - 4.5SRNA scRNA scRNA -4 90 1 8 843 607 248 0 44 chr17 33835646 33835796 -61436855 + RSINE1 SINE B4 21 163 -2 8 843 592 186 0 19 chr17 33836247 33836351 -61436300 - ID_B1 SINE B4 -19 205 104 8 843 276 281 68 50 chr17 33836373 33836534 -61436117 + L2c LINE L2 3019 3182 -205 8 843 611 254 57 34 chr17 33836647 33836822 -61435829 - B4 SINE B4 -113 179 1 8 843 920 176 206 0 chr17 33836926 33837096 -61435555 - B3 SINE B2 -10 206 2 8 843 829 261 26 204 chr17 33837096 33837501 -61435150 + MTE2b LTR MaLR 1 324 -55 8 843 754 84 244 0 chr17 33837501 33837620 -61435031 - B1_Mus1 SINE Alu 0 148 1 8 843 829 261 26 204 chr17 33837620 33837675 -61434976 + MTE2b LTR MaLR 325 379 0 8 843 188 309 0 18 chr17 33837720 33837776 -61434875 + MIRm SINE MIR 214 268 -8 8 843 363 44 0 0 chr17 33837889 33837934 -61434717 + (TAGG)n Simple_repeat Simple_repeat 1 45 0 8 843 657 184 0 0 chr17 33837935 33838093 -61434558 + GA-rich Low_complexity Low_complexity 1 158 0 8 843 534 250 76 30 chr17 33838101 33838233 -61434418 + RSINE1 SINE B4 12 149 -16 8 843 486 0 0 0 chr17 33838236 33838290 -61434361 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 843 204 149 0 0 chr17 33838291 33838338 -61434313 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 8 843 1255 48 0 0 chr17 33838384 33838531 -61434120 + B1_Mus2 SINE Alu 1 147 0 8 843 234 0 0 0 chr17 33838531 33838557 -61434094 + (A)n Simple_repeat Simple_repeat 1 26 0 8 843 628 221 45 15 chr17 33838583 33838716 -61433935 + B1_Mur1 SINE Alu 6 142 -7 8 843 216 200 0 0 chr17 33838724 33838759 -61433892 + B3 SINE B2 1 35 -181 8 843 402 80 35 118 chr17 33838755 33838840 -61433811 + B2_Mm2 SINE B2 115 192 -3 8 843 495 244 8 39 chr17 33838841 33838954 -61433697 + B1F2 SINE Alu 26 136 -13 8 843 543 31 0 0 chr17 33838954 33839019 -61433632 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 8 843 495 244 8 39 chr17 33839019 33839033 -61433618 + B1F2 SINE Alu 137 149 0 8 843 252 0 0 0 chr17 33839246 33839274 -61433377 + (A)n Simple_repeat Simple_repeat 1 28 0 8 843 233 254 73 0 chr17 33839282 33839337 -61433314 + B1F2 SINE Alu 1 59 -90 8 843 713 223 91 6 chr17 33839368 33839544 -61433107 + ID_B1 SINE B4 2 192 -32 8 843 1066 47 0 0 chr17 33839543 33839672 -61432979 + B1_Mm SINE Alu 17 145 -2 8 843 243 0 0 0 chr17 33839672 33839699 -61432952 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 843 190 310 46 74 chr17 33840270 33840378 -61432273 + L2c LINE L2 3098 3202 -185 8 843 939 220 0 22 chr17 33840522 33840703 -61431948 + MTE2b LTR MaLR 12 188 -191 8 843 1410 69 17 0 chr17 33840716 33840891 -61431760 + B2_Mm2 SINE B2 2 179 -16 8 843 849 110 0 0 chr17 33840892 33841019 -61431632 + (GGAA)n Simple_repeat Simple_repeat 3 129 0 8 843 564 269 169 0 chr17 33841019 33841149 -61431502 + RSINE1 SINE B4 14 165 0 8 843 768 216 16 76 chr17 33841156 33841341 -61431310 + MTE2b LTR MaLR 169 342 -37 8 843 245 267 16 40 chr17 33841378 33841503 -61431148 + (CA)n Simple_repeat Simple_repeat 1 122 0 8 843 522 0 0 0 chr17 33841880 33841938 -61430713 + (GA)n Simple_repeat Simple_repeat 2 59 0 8 843 414 272 124 7 chr17 33842039 33842176 -61430475 + ID_B1 SINE B4 2 154 -70 8 843 445 275 324 26 chr17 33842262 33842433 -61430218 + B4 SINE B4 1 222 -70 8 843 423 0 0 0 chr17 33842433 33842480 -61430171 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 843 394 314 8 8 chr17 33842480 33842547 -61430104 + B4A SINE B4 223 289 -3 8 843 228 35 0 0 chr17 33842615 33842644 -61430007 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 843 220 250 0 0 chr17 33842864 33842916 -61429735 + (TG)n Simple_repeat Simple_repeat 1 52 0 8 843 423 260 0 0 chr17 33843082 33843159 -61429492 - B4 SINE B4 -212 80 4 8 843 1035 116 0 13 chr17 33843231 33843380 -61429271 + B1_Mus1 SINE Alu 2 148 0 8 843 526 272 0 134 chr17 33843390 33843547 -61429104 - B1_Mur1 SINE Alu -13 136 1 8 843 201 74 0 0 chr17 33843556 33843583 -61429068 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 843 578 254 14 19 chr17 33843585 33843728 -61428923 - ID_B1 SINE B4 -13 211 78 8 843 648 188 0 19 chr17 33843722 33843841 -61428810 - B1_Mur1 SINE Alu 0 147 37 8 843 237 320 167 20 chr17 33843767 33843869 -61428782 - B4 SINE B4 -94 198 82 8 843 367 284 51 17 chr17 33843864 33843982 -61428669 - B1F SINE Alu -7 142 21 8 843 201 147 0 0 chr17 33844024 33844058 -61428593 + (TC)n Simple_repeat Simple_repeat 1 34 0 8 843 1243 35 0 0 chr17 33844058 33844200 -61428451 - B1_Mus1 SINE Alu -6 142 1 8 843 204 226 109 31 chr17 33844202 33844266 -61428385 - MIRb SINE MIR -68 200 132 8 843 250 281 22 22 chr17 33844266 33844304 -61428347 + polypurine Low_complexity Low_complexity 1 39 0 8 843 1395 55 66 0 chr17 33844304 33844486 -61428165 + B2_Mm2 SINE B2 2 195 0 8 843 250 281 22 22 chr17 33844486 33844538 -61428113 + polypurine Low_complexity Low_complexity 40 91 0 8 843 486 33 0 0 chr17 33844544 33844604 -61428047 + (TG)n Simple_repeat Simple_repeat 1 60 0 8 843 378 317 50 32 chr17 33844666 33844864 -61427787 - RSINE1 SINE B4 -83 209 4 8 843 307 279 25 75 chr17 33845416 33845461 -61427190 + RMER15 LTR ERVL 352 391 -184 8 843 2018 145 0 27 chr17 33845461 33845795 -61426856 + ORR1A2 LTR MaLR 1 325 -2 8 843 307 279 25 75 chr17 33845795 33845869 -61426782 + RMER15 LTR ERVL 392 465 -110 8 843 374 179 8 0 chr17 33845850 33845922 -61426729 + ORR1B2 LTR MaLR 21 100 -294 8 843 1235 246 25 18 chr17 33845922 33846203 -61426448 - B4 SINE B4 -9 283 1 8 843 183 42 0 0 chr17 33846239 33846263 -61426388 + (TG)n Simple_repeat Simple_repeat 1 24 0 8 843 419 152 13 0 chr17 33846285 33846364 -61426287 + (TA)n Simple_repeat Simple_repeat 1 80 0 8 843 734 248 60 13 chr17 33846373 33846544 -61426107 - B3A SINE B2 -21 174 4 8 843 295 337 81 81 chr17 33847104 33847301 -61425350 - B4 SINE B4 -59 233 37 8 843 865 193 133 0 chr17 33847351 33847532 -61425119 - B3 SINE B2 -11 205 1 8 843 288 221 273 0 chr17 33847536 33847613 -61425038 - PB1D7 SINE Alu -22 98 1 8 843 266 243 119 16 chr17 33847637 33847757 -61424894 + MTE2b LTR MaLR 1 120 -301 8 843 519 319 0 0 chr17 33847793 33847906 -61424745 - RSINE1 SINE B4 0 165 53 8 843 355 188 11 81 chr17 33848025 33848112 -61424539 + MT2A LTR ERVL 56 136 -397 8 843 956 227 104 26 chr17 33848049 33848280 -61424371 + MTE2b LTR MaLR 77 325 -54 8 843 2192 91 0 111 chr17 33848281 33848640 -61424011 + ORR1A2 LTR MaLR 1 319 -8 8 843 321 169 17 0 chr17 33848644 33848703 -61423948 + MTE2b LTR MaLR 320 379 0 8 843 357 24 0 0 chr17 33849178 33849220 -61423431 + (CA)n Simple_repeat Simple_repeat 2 43 0 8 843 252 227 0 0 chr17 33849621 33849665 -61422986 - ID2 SINE ID -39 44 1 8 843 31 0 0 0 chr17 33849707 33849738 -61422913 + AT_rich Low_complexity Low_complexity 1 31 0 8 843 291 276 192 10 chr17 33849771 33849870 -61422781 - RSINE1 SINE B4 -46 119 3 8 843 412 277 33 66 chr17 33849874 33850025 -61422626 - B1F1 SINE Alu -3 146 1 8 843 255 125 0 0 chr17 33850622 33850662 -61421989 + (T)n Simple_repeat Simple_repeat 1 40 0 8 843 1200 54 0 20 chr17 33850662 33850813 -61421838 - B1_Mus1 SINE Alu 0 148 1 8 843 488 294 62 164 chr17 33850815 33850913 -61421738 - ID_B1 SINE B4 -1 223 156 9 843 1150 170 44 0 chr17 33850913 33851119 -61421532 - B3 SINE B2 -1 215 1 9 843 488 294 62 164 chr17 33851119 33851264 -61421387 - ID_B1 SINE B4 -69 155 5 9 843 216 175 0 0 chr17 33851266 33851329 -61421322 + CT-rich Low_complexity Low_complexity 1 63 0 9 843 335 247 64 13 chr17 33851329 33851407 -61421244 - PB1D10 SINE Alu -5 112 31 9 843 578 241 22 0 chr17 33851556 33851693 -61420958 + ID_B1 SINE B4 84 223 -1 9 843 274 224 211 0 chr17 33851702 33851778 -61420873 + RSINE1 SINE B4 5 96 -69 9 843 180 0 0 0 chr17 33851779 33851799 -61420852 + (CA)n Simple_repeat Simple_repeat 2 21 0 9 843 705 229 141 0 chr17 33851859 33852051 -61420600 + ID_B1 SINE B4 3 221 -3 9 843 225 307 69 10 chr17 33852253 33852355 -61420296 + L2b LINE L2 3260 3367 -8 9 843 216 241 206 62 chr17 33852454 33852600 -61420051 - MIR SINE MIR -61 201 37 9 843 224 30 0 29 chr17 33852657 33852691 -61419960 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 9 843 1131 51 0 0 chr17 33852691 33852828 -61419823 - B1_Mus2 SINE Alu -10 137 1 9 843 816 236 60 6 chr17 33852851 33853034 -61419617 - B3 SINE B2 -1 215 23 9 843 418 299 0 25 chr17 33853063 33853183 -61419468 - PB1D7 SINE Alu -1 119 3 9 843 390 21 0 0 chr17 33853223 33853270 -61419381 + (TTG)n Simple_repeat Simple_repeat 1 47 0 9 843 323 219 13 27 chr17 33853304 33853379 -61419272 - Lx8 LINE L1 -203 7270 7197 9 843 285 296 0 122 chr17 33853481 33853612 -61419039 - B1F SINE Alu -34 115 1 9 843 198 143 0 0 chr17 33853620 33853655 -61418996 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 9 843 270 225 26 66 chr17 33853666 33853742 -61418909 + B4 SINE B4 5 77 -215 9 843 813 256 65 0 chr17 33853868 33854067 -61418584 + B3 SINE B2 2 213 -3 9 843 591 203 125 0 chr17 33854067 33854195 -61418456 + B1_Mur2 SINE Alu 6 149 0 9 843 267 308 65 11 chr17 33854209 33854301 -61418350 - PB1D10 SINE Alu -16 101 5 9 843 200 257 53 18 chr17 33854318 33854381 -61418270 + MIR SINE MIR 65 129 -147 9 843 270 0 0 0 chr17 33854403 33854433 -61418218 + (TG)n Simple_repeat Simple_repeat 2 31 0 9 843 296 222 139 0 chr17 33854437 33854509 -61418142 - ID4_ SINE ID 0 83 2 9 843 425 268 18 53 chr17 33854509 33854646 -61418005 + MIRm SINE MIR 50 177 -91 9 843 1223 42 7 0 chr17 33854697 33854841 -61417810 + B1_Mm SINE Alu 3 147 0 9 843 394 318 108 0 chr17 33854892 33855040 -61417611 - RSINE1 SINE B4 0 165 2 9 843 244 250 222 8 chr17 33855173 33855290 -61417361 - MIRb SINE MIR -14 254 113 9 843 185 35 0 65 chr17 33855536 33855567 -61417084 + (CCCGG)n Simple_repeat Simple_repeat 2 30 0 9 843 356 0 0 22 chr17 33855955 33856000 -61416651 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 9 843 452 206 62 0 chr17 33856000 33856097 -61416554 - ID_B1 SINE B4 -8 216 114 9 843 188 254 178 67 chr17 33856102 33856237 -61416414 - MIRb SINE MIR -7 261 112 9 843 688 267 72 16 chr17 33856331 33856525 -61416126 + B4A SINE B4 2 206 -86 9 843 340 184 477 0 chr17 33856534 33856560 -61416091 + ID_B1 SINE B4 29 106 -118 9 843 237 234 206 78 chr17 33856560 33856662 -61415989 + PB1D10 SINE Alu 3 117 0 9 843 342 170 258 11 chr17 33856781 33856870 -61415781 - PB1D10 SINE Alu -2 115 5 9 843 254 354 25 0 chr17 33856893 33856972 -61415679 - ID4 SINE ID -2 81 1 9 843 180 125 0 0 chr17 33856972 33857004 -61415647 + (ATGGTG)n Simple_repeat Simple_repeat 5 36 0 9 843 469 277 69 0 chr17 33857024 33857154 -61415497 - ID_B1 SINE B4 -7 217 79 9 843 260 244 127 78 chr17 33857256 33857398 -61415253 + B1_Mur1 SINE Alu 1 149 0 9 843 599 233 204 0 chr17 33857733 33857909 -61414742 - ID_B1 SINE B4 -11 213 2 9 843 491 276 38 0 chr17 33857918 33858023 -61414628 - PB1D10 SINE Alu -7 110 2 9 843 301 348 9 9 chr17 33858024 33858137 -61414514 - L1MC4 LINE L1 -212 7830 7718 9 843 259 33 0 0 chr17 33858146 33858176 -61414475 - U6 snRNA snRNA -77 30 1 9 843 280 311 0 0 chr17 33858236 33858310 -61414341 + ID4_ SINE ID 1 74 -9 9 843 437 222 11 0 chr17 33858324 33858414 -61414237 - L1MC4 LINE L1 -435 7607 7517 9 843 331 240 22 201 chr17 33858492 33858571 -61414080 - L1MC4 LINE L1 -670 7372 7294 9 843 2150 89 33 3 chr17 33858571 33858874 -61413777 + L1Md_F2 LINE L1 6271 6582 0 9 843 331 240 22 201 chr17 33858874 33858931 -61413720 - L1MC4 LINE L1 -749 7293 7240 9 843 1274 63 6 33 chr17 33858931 33859112 -61413539 + B2_Mm2 SINE B2 1 176 -19 9 843 331 240 22 201 chr17 33859112 33859203 -61413448 - L1MC4 LINE L1 -803 7239 7185 9 843 531 299 61 47 chr17 33859314 33859528 -61413123 + ID_B1 SINE B4 1 217 -7 9 843 1437 60 11 0 chr17 33859751 33859935 -61412716 - B2_Mm1a SINE B2 -7 186 1 9 843 778 215 78 10 chr17 33859954 33860147 -61412504 - B3 SINE B2 -6 210 5 9 843 504 299 28 60 chr17 33860245 33860455 -61412196 - RSINE1 SINE B4 0 165 6 9 843 297 240 0 0 chr17 33860501 33860576 -61412075 + (TATG)n Simple_repeat Simple_repeat 4 78 0 9 843 236 30 0 29 chr17 33860593 33860627 -61412024 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 9 843 688 222 0 59 chr17 33860707 33860860 -61411791 + B1_Mur1 SINE Alu 4 147 -2 9 843 925 269 23 0 chr17 33860875 33861094 -61411557 + ID_B1 SINE B4 1 224 0 9 843 472 276 81 0 chr17 33861122 33861245 -61411406 + ID_B1 SINE B4 51 183 -41 9 843 414 0 0 0 chr17 33861278 33861324 -61411327 + (TC)n Simple_repeat Simple_repeat 2 47 0 9 843 785 46 103 160 chr17 33861941 33862097 -61410554 + B1_Mm SINE Alu 1 147 0 9 843 12363 81 18 131 chr17 33862245 33862736 -61409915 - L1VL2 LINE L1 -626 2989 2542 9 843 978 71 0 0 chr17 33862736 33862863 -61409788 + B1_Mus1 SINE Alu 22 148 0 9 843 12363 81 18 131 chr17 33862863 33864745 -61407906 - L1VL2 LINE L1 -626 2541 824 9 843 1207 48 0 13 chr17 33864745 33864894 -61407757 - B1_Mus1 SINE Alu 0 148 2 9 843 4589 75 0 197 chr17 33864894 33865121 -61407530 - L1VL2 LINE L1 -5512 823 658 9 843 1155 75 0 7 chr17 33865121 33865269 -61407382 - B1_Mus1 SINE Alu 0 148 2 9 843 4589 75 0 197 chr17 33865269 33865645 -61407006 - L1VL2 LINE L1 -5678 657 300 9 843 494 45 91 0 chr17 33865645 33865711 -61406940 - L1VL2 LINE L1 -6148 187 116 9 843 414 0 0 0 chr17 33865912 33865958 -61406693 + (TTATA)n Simple_repeat Simple_repeat 4 49 0 9 843 678 180 0 9 chr17 33865960 33866072 -61406579 + B3 SINE B2 105 215 -1 9 843 583 302 130 39 chr17 33866089 33866320 -61406331 + B4A SINE B4 2 253 -39 9 843 351 44 0 0 chr17 33866402 33866447 -61406204 + (CTCA)n Simple_repeat Simple_repeat 4 48 0 9 843 484 123 0 27 chr17 33866454 33866529 -61406122 + U6 snRNA snRNA 2 74 -33 9 843 351 293 70 39 chr17 33866498 33866654 -61405997 - RMER10A LTR ERVL -270 172 12 9 843 308 256 34 100 chr17 33866679 33866803 -61405848 + PB1D7 SINE Alu 2 119 -1 9 843 1575 203 42 40 chr17 33866904 33867517 -61405134 + L1VL4 LINE L1 110 815 -5520 9 843 783 104 24 0 chr17 33867512 33867637 -61405014 + MusHAL1 LINE L1 224 351 -2361 9 843 405 0 0 0 chr17 33867637 33867682 -61404969 + (CA)n Simple_repeat Simple_repeat 1 45 0 9 843 4423 40 0 0 chr17 33867690 33868193 -61404458 - RLTR1C LTR ERV1 0 503 1 9 843 681 100 9 56 chr17 33868193 33868334 -61404317 - RLTR1B-int LTR ERV1 0 3299 3221 9 843 3738 105 15 8 chr17 33868325 33868855 -61403796 - MMVL30-int LTR ERV1 -77 3621 3088 9 843 262 98 0 0 chr17 33868835 33868876 -61403775 - MMVL30-int LTR ERV1 -2157 1541 1501 9 843 693 134 67 129 chr17 33869136 33869415 -61403236 - MMVL30-int LTR ERV1 -2187 1511 960 9 843 5347 101 4 5 chr17 33869480 33870219 -61402432 - MMVL30-int LTR ERV1 -2245 1453 716 9 843 195 139 0 0 chr17 33870447 33870483 -61402168 + (CAGA)n Simple_repeat Simple_repeat 4 39 0 9 843 2935 160 6 36 chr17 33870520 33871070 -61401581 - MMVL30-int LTR ERV1 -7023 533 1 9 843 4254 41 24 0 chr17 33871070 33871561 -61401090 - RLTR1C LTR ERV1 0 503 1 9 843 3061 134 48 11 chr17 33871561 33872127 -61400524 + MusHAL1 LINE L1 367 953 -1759 9 843 8358 111 64 39 chr17 33872124 33872878 -61399773 + Lx2B LINE L1 5610 6390 -610 9 843 1542 57 0 25 chr17 33872878 33873076 -61399575 + B2_Mm1a SINE B2 1 193 0 9 843 8358 111 64 39 chr17 33873076 33873673 -61398978 + Lx2B LINE L1 6391 6995 -5 9 843 831 90 155 16 chr17 33873692 33873876 -61398775 + B2_Mm2 SINE B2 1 214 -2 9 843 395 298 107 8 chr17 33873874 33873996 -61398655 + MTE2a LTR MaLR 1 134 -245 9 843 681 299 123 66 chr17 33873937 33874270 -61398381 + MT2A LTR ERVL 75 426 -107 9 843 238 244 0 0 chr17 33874274 33874319 -61398332 + MT2A LTR ERVL 344 388 -145 9 843 216 0 0 0 chr17 33874522 33874546 -61398105 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 9 843 429 20 0 0 chr17 33874705 33874755 -61397896 + (CA)n Simple_repeat Simple_repeat 1 50 0 9 843 675 249 37 1 chr17 33874759 33874919 -61397732 + ORR1D1 LTR MaLR 4 177 -182 9 843 2864 97 73 24 chr17 33874978 33875431 -61397220 - IAPLTR2_Mm LTR ERVK 0 475 1 9 843 15150 41 5 3 chr17 33875433 33877202 -61395449 - IAPEz-int LTR ERVK -2 6479 4708 9 843 1888 93 0 0 chr17 33877229 33877475 -61395176 - IAPEY3-int LTR ERVK -5183 2497 2252 9 843 961 67 0 0 chr17 33877476 33877595 -61395056 - IAPEY3-int LTR ERVK -5004 1477 1359 9 843 1059 101 0 54 chr17 33877595 33877763 -61394888 - IAPEY3-int LTR ERVK -5819 662 504 9 843 328 68 0 0 chr17 33877763 33877807 -61394844 - IAPLTR2b LTR ERVK -283 44 1 9 843 1126 163 23 67 chr17 33877807 33878088 -61394563 - ORR1B1 LTR MaLR -34 360 88 9 843 500 218 0 10 chr17 33878076 33878178 -61394473 + ORR1D1 LTR MaLR 270 370 0 9 843 1489 246 30 9 chr17 33878214 33878550 -61394101 + ORR1D2 LTR MaLR 4 346 -24 9 843 403 240 13 13 chr17 33878568 33878644 -61394007 + RSINE1 SINE B4 82 157 -8 9 843 485 259 17 0 chr17 33878738 33878854 -61393797 + PB1D9 SINE Alu 1 118 -2 9 843 727 139 26 0 chr17 33878860 33878975 -61393676 + B1F2 SINE Alu 32 149 0 9 843 213 182 0 83 chr17 33878979 33879019 -61393632 + A-rich Low_complexity Low_complexity 2 38 0 9 843 1164 70 0 0 chr17 33879019 33879162 -61393489 + B1_Mus2 SINE Alu 3 145 -2 9 843 1230 78 0 0 chr17 33879162 33879329 -61393322 + (GAAA)n Simple_repeat Simple_repeat 2 168 0 9 843 213 182 0 83 chr17 33879329 33879371 -61393280 + A-rich Low_complexity Low_complexity 39 77 0 9 843 2131 188 57 20 chr17 33879379 33879785 -61392866 - MTC LTR MaLR 0 421 1 9 843 453 311 24 32 chr17 33879989 33880112 -61392539 + RSINE1 SINE B4 3 124 -41 1 843 222 118 0 0 chr17 33880112 33880146 -61392505 + (CAGA)n Simple_repeat Simple_repeat 1 34 0 1 843 409 333 77 87 chr17 33880160 33880446 -61392205 - MLT1A LTR MaLR -50 324 42 1 843 562 297 12 19 chr17 33880526 33880687 -61391964 + B4A SINE B4 2 161 -131 1 843 1013 206 66 15 chr17 33880861 33881058 -61391593 + B3 SINE B2 10 216 0 1 843 642 200 17 0 chr17 33881067 33881182 -61391469 + B1_Mur3 SINE Alu 1 117 -32 1 843 365 151 60 4 chr17 33881290 33881376 -61391275 - B1F2 SINE Alu -18 130 37 1 843 1296 262 86 6 chr17 33881657 33882020 -61390631 - Lx8 LINE L1 -713 6931 6400 1 843 253 265 229 69 chr17 33882158 33882389 -61390262 - B4 SINE B4 -23 269 2 1 843 216 205 77 0 chr17 33882421 33882460 -61390191 - RSINE1 SINE B4 -34 131 90 1 843 23 0 0 0 chr17 33882633 33882656 -61389995 + AT_rich Low_complexity Low_complexity 1 23 0 1 843 470 216 54 0 chr17 33882656 33882767 -61389884 - PB1D10 SINE Alu 0 117 1 1 843 1243 40 0 0 chr17 33884403 33884551 -61388100 + B1_Mus1 SINE Alu 1 148 0 1 843 203 114 0 22 chr17 33884551 33884596 -61388055 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1 843 682 245 255 13 chr17 33884834 33885129 -61387522 + MTE2a LTR MaLR 4 370 -9 1 843 307 247 0 25 chr17 33887232 33887311 -61385340 + MIR3 SINE MIR 81 157 -51 1 843 711 197 20 165 chr17 33887783 33888032 -61384619 + ID_B1 SINE B4 5 217 -7 1 843 378 183 172 0 chr17 33888602 33888695 -61383956 - PB1D7 SINE Alu -11 109 1 1 843 221 307 168 36 chr17 33889225 33889499 -61383152 + L2b LINE L2 2297 2606 -813 1 843 905 252 5 18 chr17 33889610 33889832 -61382819 - ID_B1 SINE B4 -4 220 2 1 843 529 327 94 43 chr17 33890077 33890565 -61382086 + L2b LINE L2 2858 3373 -2 1 843 533 278 23 0 chr17 33890762 33890895 -61381756 + B1F SINE Alu 4 139 -10 1 843 920 194 31 79 chr17 33890908 33891137 -61381514 + ID_B1 SINE B4 5 222 -2 1 843 354 165 190 30 chr17 33891139 33891239 -61381412 + PB1D9 SINE Alu 1 116 -4 1 843 327 211 19 64 chr17 33891309 33891466 -61381185 + RMER17D LTR ERVK 249 398 -491 1 843 211 156 0 0 chr17 33891517 33891549 -61381102 - MIRc SINE MIR -120 148 117 1 843 218 149 30 0 chr17 33892079 33892146 -61380505 + (TAAA)n Simple_repeat Simple_repeat 4 72 0 1 843 205 35 35 0 chr17 33893560 33893589 -61379062 + L3 LINE CR1 3853 3882 -607 1 843 329 215 46 0 chr17 33893830 33893895 -61378756 - PB1D10 SINE Alu 0 117 50 1 843 1066 58 65 0 chr17 33895387 33895525 -61377126 + B1_Mus2 SINE Alu 1 147 0 1 843 564 240 22 37 chr17 33895537 33895671 -61376980 - B1_Mur2 SINE Alu -17 132 1 1 843 339 278 26 61 chr17 33895568 33895683 -61376968 - ID_B1 SINE B4 -41 183 73 1 843 443 287 101 0 chr17 33895706 33895835 -61376816 - RSINE1 SINE B4 -21 144 3 1 843 331 247 11 80 chr17 33895835 33895863 -61376788 - B1F2 SINE Alu -66 83 60 1 843 3366 48 0 5 chr17 33895863 33896261 -61376390 - MTA_Mm LTR MaLR 0 396 1 1 843 331 247 11 80 chr17 33896261 33896318 -61376333 - B1F2 SINE Alu -90 59 4 1 843 457 219 38 9 chr17 33896433 33896539 -61376112 - PB1D10 SINE Alu 0 117 9 1 843 594 271 51 19 chr17 33896459 33896617 -61376034 - ID_B1 SINE B4 -56 168 6 1 843 22 0 0 0 chr17 33896924 33896946 -61375705 + GC_rich Low_complexity Low_complexity 1 22 0 1 843 335 245 0 18 chr17 33897880 33897962 -61374689 - B1_Mur1 SINE Alu 0 149 43 1 843 225 108 0 0 chr17 33897964 33898001 -61374650 + (T)n Simple_repeat Simple_repeat 1 37 0 1 843 871 137 20 20 chr17 33898001 33898150 -61374501 - B1_Mur2 SINE Alu 0 149 1 1 843 357 24 0 0 chr17 33898154 33898196 -61374455 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 1 843 575 175 146 35 chr17 33898234 33898457 -61374194 - RMER17C LTR ERVK -405 404 1 1 843 219 246 40 40 chr17 33898464 33898540 -61374111 - PB1D9 SINE Alu 0 120 45 1 843 1380 33 26 47 chr17 33898622 33898812 -61373839 + B2_Mm2 SINE B2 1 186 -9 1 843 996 190 60 0 chr17 33898942 33899142 -61373509 - B3 SINE B2 -1 215 4 1 843 227 240 40 0 chr17 33899318 33899368 -61373283 + ID_B1 SINE B4 134 185 -39 1 843 707 233 0 0 chr17 33899391 33899520 -61373131 + B3 SINE B2 1 129 -87 1 843 477 90 0 0 chr17 33899550 33899617 -61373034 + (TC)n Simple_repeat Simple_repeat 2 68 0 1 843 188 86 0 28 chr17 33899619 33899655 -61372996 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1 843 1047 65 51 0 chr17 33899657 33899795 -61372856 - B1_Mus2 SINE Alu 0 147 3 1 843 606 275 0 0 chr17 33899816 33899965 -61372686 - B1_Mur3 SINE Alu 0 149 1 1 843 2617 52 65 0 chr17 33900098 33900422 -61372229 - ORR1A1 LTR MaLR -1 345 1 1 843 228 231 102 85 chr17 33900546 33900593 -61372058 + MT2B LTR ERVL 143 260 -339 1 843 330 246 14 0 chr17 33900593 33900662 -61371989 + B1_Mur2 SINE Alu 38 107 -42 1 843 599 311 31 74 chr17 33901260 33901451 -61371200 + MTD LTR MaLR 43 223 -196 1 843 1783 124 24 68 chr17 33901451 33901788 -61370863 - RLTRETN_Mm LTR ERVK 0 322 1 1 843 927 237 140 17 chr17 33901788 33901968 -61370683 + MTD LTR MaLR 211 419 0 1 843 380 274 79 9 chr17 33902122 33902236 -61370415 - ID_B1 SINE B4 -1 223 102 1 843 341 282 126 24 chr17 33902236 33902249 -61370402 - B1F2 SINE Alu -1 148 9 1 843 188 222 56 0 chr17 33902260 33902314 -61370337 + L2 LINE L2 2792 2848 -571 1 843 203 273 135 48 chr17 33902365 33902469 -61370182 - L2c LINE L2 -9 3378 3266 1 843 309 217 28 97 chr17 33902482 33902587 -61370064 + PB1 SINE Alu 8 124 -25 1 843 489 292 15 44 chr17 33902628 33902764 -61369887 + ID_B1 SINE B4 84 215 -9 1 843 532 254 64 21 chr17 33902785 33902926 -61369725 + RSINE1 SINE B4 1 147 -18 1 843 959 136 7 7 chr17 33903058 33903206 -61369445 + B1_Mur4 SINE Alu 2 149 -1 1 843 237 263 35 0 chr17 33903912 33903969 -61368682 + RMER5 LTR ERV1 39 97 -437 1 843 625 242 23 0 chr17 33903969 33904101 -61368550 + B1_Mus2 SINE Alu 1 135 -12 1 843 872 239 75 0 chr17 33904186 33904374 -61368277 - B3 SINE B2 -14 202 1 1 843 297 284 34 88 chr17 33904463 33904610 -61368041 - YREP_Mm Unknown Unknown -1485 327 189 1 843 755 191 32 0 chr17 33904487 33904613 -61368038 + B1_Mur2 SINE Alu 9 138 -11 1 843 195 42 0 0 chr17 33904618 33904642 -61368009 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 1 843 1282 83 9 111 chr17 33904667 33904884 -61367767 + B2_Mm2 SINE B2 1 195 0 1 843 1112 205 19 0 chr17 33904908 33905113 -61367538 + B3 SINE B2 1 209 -7 1 843 996 275 21 45 chr17 33905148 33905479 -61367172 + RMER5 LTR ERV1 200 522 -12 1 843 27 29 0 0 chr17 33905625 33905659 -61366992 + AT_rich Low_complexity Low_complexity 1 34 0 1 843 396 0 0 0 chr17 33905661 33905705 -61366946 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 843 484 255 9 36 chr17 33905705 33905815 -61366836 - RSINE1 SINE B4 -48 117 11 1 843 567 219 8 70 chr17 33905887 33906015 -61366636 + PB1D9 SINE Alu 1 120 0 1 843 603 275 70 7 chr17 33906064 33906207 -61366444 - RSINE1 SINE B4 -8 157 6 1 843 1137 45 19 0 chr17 33906221 33906377 -61366274 + (TTTC)n Simple_repeat Simple_repeat 2 160 0 1 843 324 85 0 69 chr17 33906377 33906464 -61366187 - B2_Mm2 SINE B2 -15 180 48 1 843 1331 78 11 6 chr17 33906510 33906690 -61365961 - B2_Mm1t SINE B2 -12 181 1 1 843 905 242 47 14 chr17 33906759 33906973 -61365678 + ID_B1 SINE B4 4 224 0 1 843 218 32 32 0 chr17 33906986 33907017 -61365634 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 1 843 999 123 14 0 chr17 33907017 33907163 -61365488 - B1_Mus1 SINE Alu 0 148 1 1 843 801 306 31 85 chr17 33907188 33907285 -61365366 + B4A SINE B4 4 94 -198 1 843 869 136 139 23 chr17 33907285 33907458 -61365193 + B2_Mm2 SINE B2 1 193 -2 1 843 801 306 31 85 chr17 33907458 33907590 -61365061 + B4A SINE B4 95 228 -64 1 843 1144 55 0 33 chr17 33907590 33907741 -61364910 + B1_Mm SINE Alu 1 146 -1 1 843 192 77 0 0 chr17 33907745 33907771 -61364880 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 843 801 306 31 85 chr17 33907771 33907801 -61364850 + B4A SINE B4 229 253 -39 1 843 4429 114 93 7 chr17 33907801 33908478 -61364173 + RMER19A LTR ERVK 3 737 0 1 843 801 306 31 85 chr17 33908478 33908504 -61364147 + B4A SINE B4 254 279 -13 1 843 490 221 58 39 chr17 33908715 33908848 -61363803 - B1F SINE Alu -8 141 4 1 843 195 42 0 0 chr17 33908935 33908959 -61363692 + (TC)n Simple_repeat Simple_repeat 1 24 0 1 843 422 248 197 73 chr17 33908985 33909163 -61363488 - B3 SINE B2 -15 201 2 1 843 321 317 99 8 chr17 33909163 33909284 -61363367 - ID_B1 SINE B4 -67 157 26 1 843 641 228 31 0 chr17 33909302 33909429 -61363222 - ID_B1 SINE B4 0 224 94 1 843 254 252 46 55 chr17 33909444 33909553 -61363098 - L1ME2z LINE L1 -273 6171 6064 1 843 486 175 0 0 chr17 33909663 33909743 -61362908 + B3 SINE B2 1 80 -136 1 843 411 266 0 0 chr17 33909759 33909838 -61362813 + B3A SINE B2 2 80 -118 1 843 1568 22 33 0 chr17 33909965 33910145 -61362506 + B2_Mm1a SINE B2 2 187 -6 1 843 314 295 29 79 chr17 33910191 33910331 -61362320 + MER33 DNA MER1_type 2 134 -190 1 843 453 281 65 0 chr17 33910332 33910471 -61362180 + ID_B1 SINE B4 76 223 -1 1 843 333 288 203 0 chr17 33910513 33910631 -61362020 + RSINE1 SINE B4 2 143 -22 1 843 182 174 22 0 chr17 33910648 33910694 -61361957 + (TAAA)n Simple_repeat Simple_repeat 4 50 0 1 843 543 277 0 48 chr17 33910707 33910832 -61361819 - PB1D7 SINE Alu -1 119 1 1 843 523 265 63 25 chr17 33910888 33911047 -61361604 - ID_B1 SINE B4 -55 169 5 1 843 23 33 0 0 chr17 33911233 33911263 -61361388 + AT_rich Low_complexity Low_complexity 1 30 0 1 843 522 280 48 48 chr17 33911270 33911435 -61361216 - RSINE1 SINE B4 0 165 1 1 843 616 294 59 0 chr17 33911459 33911646 -61361005 - B3 SINE B2 -17 199 2 1 843 338 0 24 0 chr17 33912564 33912606 -61360045 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 843 248 337 97 87 chr17 33912650 33912680 -61359971 - B3A SINE B2 0 198 2 1 843 762 261 12 24 chr17 33912680 33912845 -61359806 - RSINE1 SINE B4 0 165 3 1 843 726 292 44 5 chr17 33912847 33913050 -61359601 - ID_B1 SINE B4 -2 222 12 1 843 583 276 84 80 chr17 33913168 33913301 -61359350 + ID_B1 SINE B4 2 133 -91 1 843 1321 93 16 11 chr17 33913301 33913486 -61359165 - B2_Mm2 SINE B2 -9 186 1 1 843 583 276 84 80 chr17 33913486 33913565 -61359086 + ID_B1 SINE B4 134 215 -9 1 843 206 311 19 46 chr17 33913724 33913832 -61358819 - MIR SINE MIR -98 164 60 1 843 398 279 32 108 chr17 33914551 33914708 -61357943 - B1F SINE Alu 0 149 5 1 843 958 245 10 0 chr17 33914591 33914791 -61357860 - ID_B1 SINE B4 -21 203 2 1 843 482 340 36 54 chr17 33914801 33914969 -61357682 - ID_B1 SINE B4 -58 166 2 1 843 272 247 26 13 chr17 33914976 33915054 -61357597 - B1F SINE Alu 0 149 71 1 843 225 173 38 19 chr17 33916127 33916180 -61356471 + GA-rich Low_complexity Low_complexity 2 55 0 1 843 440 35 17 0 chr17 33918618 33918676 -61353975 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 843 337 261 77 17 chr17 33919313 33919430 -61353221 + ID_B1 SINE B4 99 222 -2 1 843 317 287 87 40 chr17 33919430 33919579 -61353072 + ID_B1 SINE B4 69 224 0 1 843 492 248 52 22 chr17 33919445 33919581 -61353070 + B1F2 SINE Alu 10 149 0 1 843 590 226 51 36 chr17 33919587 33919725 -61352926 + B1_Mur1 SINE Alu 8 147 -2 1 843 481 296 214 23 chr17 33919749 33919922 -61352729 + B3A SINE B2 1 206 -10 1 843 1395 64 21 31 chr17 33919926 33920120 -61352531 + B2_Mm2 SINE B2 3 194 -1 1 843 260 319 0 28 chr17 33920744 33920815 -61351836 + PB1D9 SINE Alu 1 69 -51 1 843 1285 102 26 11 chr17 33920827 33921016 -61351635 + B2_Mm1t SINE B2 2 193 0 1 843 635 250 14 0 chr17 33921019 33921163 -61351488 + RSINE1 SINE B4 3 148 -17 1 843 647 232 83 6 chr17 33921206 33921375 -61351276 + B3A SINE B2 1 182 -16 1 843 511 272 50 43 chr17 33921387 33921551 -61351100 + B3A SINE B2 32 195 0 1 843 509 321 24 18 chr17 33921712 33921877 -61350774 - B4 SINE B4 -126 166 1 1 843 225 121 30 0 chr17 33922095 33922128 -61350523 - MIRm SINE MIR -23 253 220 1 843 217 250 176 0 chr17 33922183 33922251 -61350400 + BC1_Mm scRNA scRNA 6 85 -67 1 843 332 276 13 0 chr17 33922266 33922342 -61350309 + ID4 SINE ID 2 78 -5 1 843 357 214 248 43 chr17 33922383 33922445 -61350206 + MTE2b LTR MaLR 1 70 -309 1 843 4246 130 40 124 chr17 33922445 33922911 -61349740 + RMER17A2 LTR ERVK 1 457 -449 1 843 324 48 0 0 chr17 33922911 33922953 -61349698 + (TC)n Simple_repeat Simple_repeat 2 43 0 1 843 4246 130 40 124 chr17 33922953 33923190 -61349461 + RMER17A2 LTR ERVK 458 692 -214 1 843 213 65 0 0 chr17 33923190 33923221 -61349430 + (CCCTAA)n Simple_repeat Simple_repeat 4 34 0 1 843 4246 130 40 124 chr17 33923221 33923501 -61349150 + RMER17A2 LTR ERVK 693 901 -5 1 843 357 214 248 43 chr17 33923501 33923599 -61349052 + MTE2b LTR MaLR 71 194 -185 1 843 218 71 0 0 chr17 33923606 33923634 -61349017 + B1_Mus1 SINE Alu 2 29 -119 1 843 230 154 0 0 chr17 33923633 33923672 -61348979 - B2_Mm2 SINE B2 -156 39 1 1 843 530 248 8 16 chr17 33923702 33923829 -61348822 + MTE2a LTR MaLR 57 182 -197 1 843 837 181 0 77 chr17 33923831 33923955 -61348696 + B1_Mur1 SINE Alu 4 127 -22 1 843 1375 95 11 0 chr17 33923955 33924144 -61348507 + B2_Mm1t SINE B2 1 191 -2 1 843 837 181 0 77 chr17 33924144 33924175 -61348476 + B1_Mur1 SINE Alu 128 147 -2 1 843 478 219 109 168 chr17 33924183 33924403 -61348248 + MTE2a LTR MaLR 165 371 -8 1 843 657 267 55 73 chr17 33924422 33924640 -61348011 + ID_B1 SINE B4 2 215 -9 1 843 813 296 20 0 chr17 33924685 33924881 -61347770 - B3 SINE B2 -10 206 7 1 843 822 218 96 10 chr17 33925098 33925297 -61347354 - B3 SINE B2 0 216 1 1 843 610 90 19 11 chr17 33925327 33925442 -61347209 + B1_Mus1 SINE Alu 3 120 0 1 843 730 41 82 0 chr17 33925468 33925566 -61347085 + B1_Mus1 SINE Alu 1 106 -42 1 843 457 158 10 87 chr17 33925523 33925627 -61347024 - B1_Mm SINE Alu -51 96 1 1 843 304 294 172 42 chr17 33925769 33926177 -61346474 - L1MC4 LINE L1 -213 7829 7369 1 843 519 78 0 0 chr17 33926212 33926289 -61346362 + (TG)n Simple_repeat Simple_repeat 2 78 0 1 843 900 210 107 23 chr17 33926299 33926514 -61346137 - B4A SINE B4 -59 233 1 1 843 699 218 7 13 chr17 33926592 33926741 -61345910 + B1_Mus1 SINE Alu 1 148 0 1 843 3747 94 109 2 chr17 33926949 33927492 -61345159 + MT2B LTR ERVL 1 601 0 1 843 465 335 7 19 chr17 33927599 33927754 -61344897 + RMER15 LTR ERVL 267 419 -156 1 843 420 306 10 0 chr17 33928008 33928106 -61344545 - ID_B1 SINE B4 -125 99 1 1 843 22 35 0 0 chr17 33928381 33928410 -61344241 + AT_rich Low_complexity Low_complexity 1 29 0 1 843 665 298 18 18 chr17 33928566 33928785 -61343866 + ID_B1 SINE B4 3 221 -3 1 843 1066 227 0 0 chr17 33928797 33929004 -61343647 + B3 SINE B2 4 210 -6 1 843 28 0 0 0 chr17 33929004 33929032 -61343619 + AT_rich Low_complexity Low_complexity 1 28 0 1 843 937 249 13 53 chr17 33929083 33929094 -61343557 - B3 SINE B2 0 216 207 1 843 823 184 7 0 chr17 33929094 33929235 -61343416 - B1_Mur1 SINE Alu -7 142 1 1 843 937 249 13 53 chr17 33929235 33929448 -61343203 - B3 SINE B2 -10 206 1 1 843 346 334 27 75 chr17 33929511 33929844 -61342807 - L1ME1 LINE L1 -11 6168 5852 1 843 954 138 7 7 chr17 33929868 33930014 -61342637 - B1_Mus1 SINE Alu 0 148 3 1 843 254 199 45 54 chr17 33930021 33930119 -61342532 - Lx LINE L1 -603 5756 5651 1 843 2823 52 3 3 chr17 33930122 33930468 -61342183 - ORR1A1 LTR MaLR 0 346 1 1 843 700 241 150 68 chr17 33930476 33930770 -61341881 - Lx8 LINE L1 -3 7470 7153 1 843 279 311 101 28 chr17 33930824 33930933 -61341718 - PB1D7 SINE Alu 0 117 1 1 843 758 160 0 8 chr17 33930988 33931108 -61341543 + B1_Mur4 SINE Alu 3 121 -29 1 843 4740 137 67 24 chr17 33931092 33931145 -61341506 + ORR1B1-int LTR MaLR 928 974 -989 1 843 1225 125 54 0 chr17 33931145 33931329 -61341322 + B2_Mm2 SINE B2 2 195 0 1 843 4740 143 67 39 chr17 33931329 33932231 -61340420 + ORR1B1-int LTR MaLR 809 1771 -192 1 843 1556 49 0 5 chr17 33932231 33932417 -61340234 - B2_Mm1a SINE B2 -7 186 2 1 843 4389 155 63 174 chr17 33932417 33932736 -61339915 + ORR1B1-int LTR MaLR 1654 1788 -4 1 843 1196 43 0 0 chr17 33932736 33932875 -61339776 + B1_Mus1 SINE Alu 3 141 -7 1 843 900 148 62 193 chr17 33932875 33932893 -61339758 + ORR1B1 LTR MaLR 228 242 -152 1 843 1082 23 0 0 chr17 33932893 33933003 -61339648 + B1_Mm SINE Alu 20 147 0 1 843 1361 87 0 0 chr17 33933016 33933200 -61339451 + ORR1B1 LTR MaLR 211 394 0 1 843 251 263 84 0 chr17 33933211 33933306 -61339345 - B1_Mus1 SINE Alu -17 131 29 1 843 367 334 102 21 chr17 33933321 33933654 -61338997 - L1MC LINE L1 -2170 5712 5353 1 843 608 238 33 0 chr17 33933690 33933812 -61338839 + RSINE1 SINE B4 2 127 -38 1 843 188 61 61 0 chr17 33933831 33933864 -61338787 + (TCTCTG)n Simple_repeat Simple_repeat 2 36 0 1 843 774 150 12 120 chr17 33933924 33934091 -61338560 + B1_Mur3 SINE Alu 1 149 0 1 843 263 132 0 0 chr17 33934113 33934151 -61338500 + tRNA-Arg-AGA tRNA tRNA 1 38 -38 1 843 405 254 213 33 chr17 33934235 33934418 -61338233 - B3 SINE B2 0 216 1 1 843 21 57 0 0 chr17 33934418 33934453 -61338198 + AT_rich Low_complexity Low_complexity 1 35 0 1 843 609 312 6 38 chr17 33934462 33934589 -61338062 - RSINE1 SINE B4 0 165 43 1 843 3793 60 4 32 chr17 33934589 33935085 -61337566 + LTRIS_Mm LTR ERV1 1 482 0 1 843 609 312 6 38 chr17 33935085 33935117 -61337534 - RSINE1 SINE B4 -123 42 11 1 843 187 31 62 0 chr17 33935123 33935155 -61337496 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 843 506 261 113 0 chr17 33935159 33935274 -61337377 - ID_B1 SINE B4 -13 211 84 1 843 642 313 6 30 chr17 33935667 33935835 -61336816 - RSINE1 SINE B4 0 165 2 1 843 446 106 423 0 chr17 33935924 33936028 -61336623 + B1_Mus1 SINE Alu 1 148 0 1 843 1122 112 62 6 chr17 33936100 33936279 -61336372 - B2_Mm2 SINE B2 -5 190 2 1 843 486 278 79 47 chr17 33936288 33936503 -61336148 - L2a LINE L2 -248 3178 2957 1 843 671 309 20 0 chr17 33936521 33936670 -61335981 + RSINE1 SINE B4 14 165 0 1 843 607 150 157 8 chr17 33936798 33936919 -61335732 - B1_Mus1 SINE Alu 0 148 10 1 843 227 208 0 0 chr17 33936897 33936945 -61335706 - MT2B LTR ERVL -314 287 240 1 843 1676 36 0 0 chr17 33937072 33937264 -61335387 - B2_Mm1a SINE B2 0 193 2 1 843 185 215 71 71 chr17 33937310 33937395 -61335256 - L2a LINE L2 -750 2669 2585 1 843 362 282 0 0 chr17 33937396 33937474 -61335177 + ID SINE ID 3 80 -144 1 843 1181 48 0 14 chr17 33937489 33937636 -61335015 + B1_Mus2 SINE Alu 2 146 -1 1 843 182 62 31 0 chr17 33937636 33937668 -61334983 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 1 843 485 222 108 29 chr17 33937843 33937982 -61334669 - B1_Mur4 SINE Alu 0 150 1 1 843 22 0 0 0 chr17 33937986 33938008 -61334643 + AT_rich Low_complexity Low_complexity 1 22 0 1 843 658 234 0 68 chr17 33938057 33938204 -61334447 + B1_Mur2 SINE Alu 3 139 -10 1 843 275 333 12 5 chr17 33938263 33938363 -61334288 - ID4 SINE ID -47 105 7 1 843 345 62 0 0 chr17 33938430 33938478 -61334173 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 843 523 270 21 21 chr17 33938485 33938625 -61334026 - RSINE1 SINE B4 -19 146 7 1 843 400 231 54 11 chr17 33938641 33938733 -61333918 - ID_B1 SINE B4 -2 222 127 1 843 1209 48 0 14 chr17 33938749 33938897 -61333754 + B1_Mm SINE Alu 2 147 0 1 843 749 236 55 40 chr17 33938928 33939127 -61333524 + B3 SINE B2 3 204 -12 1 843 261 0 0 0 chr17 33939396 33939425 -61333226 + (T)n Simple_repeat Simple_repeat 1 29 0 1 843 885 216 78 25 chr17 33939655 33939859 -61332792 - B3 SINE B2 0 216 2 1 843 207 0 0 0 chr17 33940066 33940089 -61332562 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 1 843 556 245 18 5 chr17 33940095 33940232 -61332419 - B1F SINE Alu -13 136 1 1 843 901 274 0 24 chr17 33940316 33940522 -61332129 - B4 SINE B4 -2 290 90 1 843 224 54 54 0 chr17 33940525 33940562 -61332089 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 843 280 243 57 0 chr17 33940600 33940670 -61331981 - RSINE1 SINE B4 -68 97 24 1 843 1910 112 16 143 chr17 33940929 33941018 -61331633 - ORR1A4 LTR MaLR 0 329 262 1 843 1222 54 0 0 chr17 33941018 33941165 -61331486 - B1_Mm SINE Alu 0 147 1 1 843 1910 112 16 143 chr17 33941165 33941452 -61331199 - ORR1A4 LTR MaLR -68 261 1 1 843 272 27 27 0 chr17 33942045 33942082 -61330569 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 1 843 1041 123 0 7 chr17 33942165 33942312 -61330339 - B1_Mus1 SINE Alu -2 146 1 1 843 306 50 0 0 chr17 33942337 33942377 -61330274 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 1 843 953 170 75 27 chr17 33942377 33942564 -61330087 + ORR1C2 LTR MaLR 189 384 0 1 843 265 120 18 91 chr17 33942599 33942654 -61329997 + B1_Mus2 SINE Alu 97 147 0 1 843 963 124 15 0 chr17 33942839 33942976 -61329675 + B1_Mur4 SINE Alu 2 140 -10 1 843 459 0 0 0 chr17 33942976 33943027 -61329624 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 1 843 845 169 137 0 chr17 33943033 33943252 -61329399 + RMER10B LTR ERVL 17 265 -133 1 843 1037 193 56 52 chr17 33943251 33943502 -61329149 + RMER10B LTR ERVL 147 398 0 1 843 441 301 33 99 chr17 33943797 33943978 -61328673 + B4A SINE B4 86 254 -38 1 843 252 0 0 0 chr17 33944024 33944052 -61328599 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 843 374 211 13 38 chr17 33944146 33944225 -61328426 - PB1D10 SINE Alu -32 85 9 1 843 280 196 0 0 chr17 33944302 33944353 -61328298 + ID_B1 SINE B4 119 169 -55 1 843 4444 85 32 146 chr17 33944411 33945324 -61327327 + RMER17D2 LTR ERVK 1 809 0 1 843 855 38 0 0 chr17 33945764 33945869 -61326782 - B1_Mus2 SINE Alu 0 147 43 1 843 367 211 26 0 chr17 33945911 33945987 -61326664 - PB1D9 SINE Alu 0 120 43 1 843 1125 95 0 0 chr17 33946031 33946179 -61326472 - B1_Mus1 SINE Alu 0 148 1 1 843 652 321 12 6 chr17 33946200 33946360 -61326291 - RSINE1 SINE B4 -1 164 4 1 843 185 35 69 0 chr17 33946466 33946495 -61326156 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 1 843 181 294 0 0 chr17 33946563 33946614 -61326037 - L2c LINE L2 -12 3375 3325 1 843 1738 21 0 0 chr17 33946855 33947048 -61325603 - B2_Mm1a SINE B2 0 193 1 1 844 225 0 0 0 chr17 33948003 33948028 -61324623 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 844 238 259 0 18 chr17 33948543 33948598 -61324053 + ID_B1 SINE B4 101 154 -70 1 844 1104 50 35 0 chr17 33948599 33948740 -61323911 + B1_Mm SINE Alu 2 147 0 1 844 424 297 26 6 chr17 33948818 33948974 -61323677 + RSINE1 SINE B4 2 160 -5 1 844 30 27 0 0 chr17 33948989 33949026 -61323625 + AT_rich Low_complexity Low_complexity 1 37 0 1 844 216 0 0 0 chr17 33949081 33949105 -61323546 + (A)n Simple_repeat Simple_repeat 1 24 0 1 844 675 212 58 0 chr17 33949115 33949252 -61323399 + B1F2 SINE Alu 5 149 0 1 844 367 214 0 82 chr17 33949273 33949370 -61323281 + PB1D9 SINE Alu 32 120 0 1 844 701 278 42 9 chr17 33949407 33949621 -61323030 + ID_B1 SINE B4 1 221 -3 1 844 370 298 142 6 chr17 33949641 33949810 -61322841 + B3A SINE B2 2 193 -5 1 844 409 222 11 0 chr17 33950803 33950893 -61321758 - PB1D9 SINE Alu -7 113 23 1 844 298 242 181 42 chr17 33950963 33951083 -61321568 - PB1D10 SINE Alu -5 144 1 1 844 754 215 181 0 chr17 33951125 33951302 -61321349 - B3 SINE B2 -7 209 1 1 844 803 226 15 55 chr17 33951316 33951517 -61321134 - B3A SINE B2 -3 195 3 1 844 759 212 179 0 chr17 33951520 33951704 -61320947 - ID_B1 SINE B4 -6 218 2 1 844 230 279 115 0 chr17 33952041 33952102 -61320549 - ID4_ SINE ID -14 69 2 1 844 1241 94 67 0 chr17 33952156 33952336 -61320315 - B2_Mm2 SINE B2 -3 192 1 1 844 619 215 0 139 chr17 33952362 33952404 -61320247 - B1_Mus2 SINE Alu -17 130 50 1 844 329 291 106 49 chr17 33952404 33952459 -61320192 - ID_B1 SINE B4 -25 199 132 1 844 1069 63 201 0 chr17 33952459 33952618 -61320033 - B2_Mm1a SINE B2 -1 192 2 1 844 619 215 0 139 chr17 33952618 33952671 -61319980 - B1_Mus2 SINE Alu -98 49 1 1 844 329 291 106 49 chr17 33952671 33952685 -61319966 - ID_B1 SINE B4 -93 131 70 1 844 470 279 45 0 chr17 33952811 33952922 -61319729 + PB1D10 SINE Alu 2 117 0 1 844 254 316 219 7 chr17 33952922 33952948 -61319703 + B4A SINE B4 87 252 -40 1 844 1092 64 36 0 chr17 33953305 33953439 -61319212 + B1_Mm SINE Alu 1 139 -8 1 844 258 32 0 0 chr17 33953439 33953470 -61319181 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 844 235 258 191 11 chr17 33955593 33955687 -61316964 + MIRm SINE MIR 39 149 -127 1 844 892 68 17 0 chr17 33956463 33956581 -61316070 - PB1D9 SINE Alu 0 120 1 1 844 496 314 213 0 chr17 33957059 33957247 -61315404 - B4A SINE B4 -24 268 41 1 844 290 325 0 12 chr17 33957313 33957394 -61315257 - PB1D10 SINE Alu -20 97 18 1 844 374 222 190 10 chr17 33957533 33957633 -61315018 - PB1D9 SINE Alu -2 118 1 1 844 297 238 56 67 chr17 33957558 33957648 -61315003 - MT2B LTR ERVL -358 243 155 1 844 546 195 159 30 chr17 33957947 33958079 -61314572 - B1_Mur4 SINE Alu 0 150 2 1 844 228 207 111 79 chr17 33958102 33958165 -61314486 - B4 SINE B4 -63 229 165 1 844 289 138 230 0 chr17 33958112 33958188 -61314463 - B1F1 SINE Alu -7 142 26 1 844 219 182 155 70 chr17 33960353 33960424 -61312227 + B2_Mm2 SINE B2 1 77 -118 1 844 212 220 100 0 chr17 33960445 33960495 -61312156 - PB1D7 SINE Alu -14 106 52 1 844 216 247 43 120 chr17 33960718 33960810 -61311841 - B1F SINE Alu -12 137 53 1 844 690 82 264 0 chr17 33960936 33961046 -61311605 + B1_Mus1 SINE Alu 1 139 -9 1 844 1168 49 21 0 chr17 33961954 33962098 -61310553 - B1_Mus2 SINE Alu 0 147 1 1 844 377 279 157 35 chr17 33962580 33962649 -61310002 + B4 SINE B4 9 101 -191 1 844 595 201 74 7 chr17 33962649 33962784 -61309867 + B1_Mus2 SINE Alu 2 145 -2 1 844 417 307 74 58 chr17 33963235 33963425 -61309226 - ID_B1 SINE B4 -30 194 2 1 844 598 250 78 24 chr17 33963466 33963671 -61308980 - B3 SINE B2 0 216 1 1 844 522 46 0 0 chr17 33963753 33963818 -61308833 + (TCTA)n Simple_repeat Simple_repeat 1 65 0 1 844 661 233 61 7 chr17 33964187 33964334 -61308317 - RSINE1 SINE B4 -6 159 5 1 844 748 207 90 40 chr17 33964351 33964552 -61308099 - B3 SINE B2 -5 211 1 1 844 354 276 0 31 chr17 33964568 33964665 -61307986 - PB1D7 SINE Alu -13 107 14 1 844 721 183 30 8 chr17 33964729 33964861 -61307790 - B1_Mur3 SINE Alu 0 149 15 1 844 762 170 13 52 chr17 33964882 33965037 -61307614 - B1_Mur4 SINE Alu 0 150 2 1 844 566 176 133 30 chr17 33965054 33965189 -61307462 + B1_Mur2 SINE Alu 1 149 0 1 844 404 299 26 116 chr17 33965237 33965426 -61307225 - B3A SINE B2 -24 174 3 1 844 299 232 78 78 chr17 33965440 33965543 -61307108 - ID_B1 SINE B4 0 224 122 1 844 609 194 250 0 chr17 33965543 33965703 -61306948 - B3 SINE B2 -15 201 2 1 844 25 0 0 0 chr17 33965707 33965732 -61306919 + AT_rich Low_complexity Low_complexity 1 25 0 1 844 269 317 0 88 chr17 33966888 33966962 -61305689 + PB1D10 SINE Alu 3 66 -51 1 844 519 259 57 64 chr17 33966962 33967135 -61305516 + B4 SINE B4 2 161 -63 1 844 273 321 17 86 chr17 33967051 33967167 -61305484 + PB1D10 SINE Alu 5 112 -5 1 844 446 235 92 8 chr17 33967176 33967296 -61305355 + RSINE1 SINE B4 8 137 -28 1 844 721 286 78 11 chr17 33967720 33967911 -61304740 + B3 SINE B2 2 205 -11 1 844 486 252 130 0 chr17 33967988 33968111 -61304540 + B1_Mur1 SINE Alu 3 141 -8 1 844 710 101 9 0 chr17 33968118 33968227 -61304424 + (GA)n Simple_repeat Simple_repeat 2 111 0 1 844 603 259 30 0 chr17 33968249 33968380 -61304271 + B3A SINE B2 2 136 -62 1 844 426 39 0 0 chr17 33968393 33968445 -61304206 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 844 298 250 47 57 chr17 33968493 33968599 -61304052 - B1_Mur3 SINE Alu -7 142 38 1 844 615 236 25 100 chr17 33968604 33968764 -61303887 - B1_Mur3 SINE Alu -1 148 1 1 844 1415 70 38 0 chr17 33968802 33968988 -61303663 + B2_Mm2 SINE B2 1 193 -2 1 844 471 216 11 0 chr17 33969028 33969116 -61303535 + B4 SINE B4 86 174 -118 1 844 311 330 44 9 chr17 33969116 33969141 -61303510 + B1F2 SINE Alu 1 117 -32 1 844 279 277 0 0 chr17 33969200 33969348 -61303303 + (CA)n Simple_repeat Simple_repeat 1 148 0 1 844 247 185 0 110 chr17 33969624 33969715 -61302936 + T-rich Low_complexity Low_complexity 1 81 0 1 844 890 63 159 0 chr17 33969716 33969842 -61302809 - B1_Mm SINE Alu -1 146 1 1 844 442 241 45 0 chr17 33969875 33969987 -61302664 + PB1D9 SINE Alu 3 119 -1 1 844 602 244 227 0 chr17 33969991 33970167 -61302484 - B3 SINE B2 0 216 1 1 844 511 231 213 24 chr17 33970176 33970340 -61302311 - B3A SINE B2 -2 196 2 1 844 195 94 0 0 chr17 33970359 33970373 -61302278 + (A)n Simple_repeat Simple_repeat 1 14 0 1 844 935 31 146 15 chr17 33970373 33970503 -61302148 + B1_Mm SINE Alu 1 147 0 1 844 195 94 0 0 chr17 33970503 33970520 -61302131 + (A)n Simple_repeat Simple_repeat 1 17 0 1 844 237 288 0 0 chr17 33970603 33970662 -61301989 - RSINE1 SINE B4 -31 134 76 1 844 237 282 92 23 chr17 33970689 33970776 -61301875 - PB1D10 SINE Alu -24 93 1 1 844 436 296 14 29 chr17 33970776 33970859 -61301792 - B4A SINE B4 -209 83 3 1 844 773 238 61 0 chr17 33970875 33971039 -61301612 - ID_B1 SINE B4 -1 223 50 1 844 1255 34 0 14 chr17 33971048 33971196 -61301455 - B1_Mm SINE Alu -1 146 1 1 844 222 254 105 35 chr17 33971196 33971253 -61301398 - ID SINE ID -162 62 2 1 844 291 345 11 11 chr17 33971259 33971271 -61301380 - PB1D10 SINE Alu -21 96 6 1 844 292 342 13 0 chr17 33971271 33971350 -61301301 - ID_B1 SINE B4 -58 166 87 1 844 618 219 93 8 chr17 33971355 33971484 -61301167 - B1_Mur1 SINE Alu -9 140 1 1 844 229 213 0 0 chr17 33971921 33971968 -61300683 + T-rich Low_complexity Low_complexity 3 49 0 1 844 380 235 171 29 chr17 33971992 33972085 -61300566 - B1_Mur1 SINE Alu -28 121 12 1 844 998 208 205 141 chr17 33972085 33972583 -61300068 - MT2A LTR ERVL -3 530 1 1 844 380 235 171 29 chr17 33972583 33972594 -61300057 - B1_Mur1 SINE Alu -138 11 2 1 844 1313 103 5 16 chr17 33972627 33972815 -61299836 + B2_Mm1a SINE B2 1 186 -7 1 844 326 277 0 60 chr17 33972845 33972945 -61299706 - PB1 SINE Alu -22 105 12 1 844 382 238 38 0 chr17 33973001 33973081 -61299570 - PB1D10 SINE Alu -8 109 27 1 844 504 264 201 55 chr17 33973231 33973595 -61299056 - RMER10A LTR ERVL -25 417 1 1 844 1594 200 136 131 chr17 33973908 33974213 -61298438 + Lx7 LINE L1 6864 7164 -532 1 844 1251 34 14 0 chr17 33974213 33974361 -61298290 - B1_Mur4 SINE Alu 0 150 1 1 844 1594 200 136 131 chr17 33974361 33974606 -61298045 + Lx7 LINE L1 7165 7417 -279 1 844 1287 99 33 0 chr17 33974606 33974788 -61297863 - B2_Mm1t SINE B2 -4 189 2 1 844 258 32 0 0 chr17 33974815 33974846 -61297805 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 844 379 154 124 33 chr17 33974846 33974956 -61297695 + Lx7 LINE L1 7575 7695 -1 1 844 331 262 37 12 chr17 33975603 33975684 -61296967 - RSINE1 SINE B4 0 165 83 1 844 351 255 82 58 chr17 33975703 33975874 -61296777 - B4 SINE B4 -113 179 5 1 844 401 239 51 34 chr17 33976037 33976154 -61296497 + PB1D7 SINE Alu 1 119 -1 1 844 558 98 0 0 chr17 33976490 33976572 -61296079 + (TCCC)n Simple_repeat Simple_repeat 4 85 0 1 844 831 162 28 0 chr17 33976575 33976717 -61295934 - B1_Mus2 SINE Alu -1 146 1 1 844 220 250 0 0 chr17 33976719 33976763 -61295888 + T-rich Low_complexity Low_complexity 1 44 0 1 844 599 230 11 33 chr17 33976763 33976905 -61295746 - ID_B1 SINE B4 -148 144 2 1 844 402 277 100 8 chr17 33976905 33977025 -61295626 - B1F SINE Alu 0 149 19 1 844 241 311 18 36 chr17 33976945 33977055 -61295596 - MT2B2 LTR ERVL -325 259 152 1 844 5413 134 114 9 chr17 33977214 33977762 -61294889 - RLTR25A LTR ERVK -2 1101 515 1 844 180 0 0 0 chr17 33977762 33977782 -61294869 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1 844 5413 134 114 9 chr17 33977782 33978219 -61294432 - RLTR25A LTR ERVK -589 514 15 1 844 484 57 0 28 chr17 33978241 33978313 -61294338 + L1Md_F2 LINE L1 6501 6570 -12 1 844 519 12 202 0 chr17 33978310 33978394 -61294257 + L1Md_F3 LINE L1 6470 6570 -14 1 844 231 36 0 0 chr17 33978704 33978732 -61293919 + (T)n Simple_repeat Simple_repeat 1 28 0 1 844 1203 41 7 0 chr17 33978734 33978879 -61293772 - B1_Mus2 SINE Alu 0 147 2 1 844 241 322 43 65 chr17 33978928 33979021 -61293630 + ID_B1 SINE B4 78 168 -56 1 844 321 292 120 40 chr17 33978942 33979042 -61293609 + PB1D10 SINE Alu 13 120 -29 1 844 232 241 49 25 chr17 33979319 33979400 -61293251 - L2a LINE L2 -80 3346 3264 1 844 1030 122 0 0 chr17 33979560 33979707 -61292944 - B1_Mus1 SINE Alu 0 148 2 1 844 383 224 11 41 chr17 33979735 33979822 -61292829 - ID4 SINE ID -70 82 1 1 844 292 236 121 61 chr17 33979822 33979921 -61292730 - PB1D10 SINE Alu -3 114 10 1 844 212 219 176 59 chr17 33979854 33979956 -61292695 - ID_B1 SINE B4 -57 167 54 1 844 226 127 17 68 chr17 33980825 33980884 -61291767 + T-rich Low_complexity Low_complexity 2 57 0 1 844 705 175 87 0 chr17 33980884 33981010 -61291641 - B1_Mur2 SINE Alu 0 149 13 1 844 384 318 18 9 chr17 33981017 33981128 -61291523 - PB1D10 SINE Alu -5 112 1 1 844 238 286 68 41 chr17 33981978 33982051 -61290600 + ID4_ SINE ID 3 77 -75 1 844 190 354 31 23 chr17 33982054 33982184 -61290467 - L2a LINE L2 -291 3084 2954 1 844 312 263 167 10 chr17 33982389 33982485 -61290166 - PB1D9 SINE Alu -9 111 1 1 844 234 241 34 17 chr17 33982690 33982749 -61289902 + MIRc SINE MIR 39 98 -170 1 844 481 266 45 137 chr17 33983444 33983758 -61288893 - B4A SINE B4 -6 286 2 1 844 611 153 20 0 chr17 33983788 33983886 -61288765 - B1_Mur1 SINE Alu -27 122 23 1 844 396 40 0 0 chr17 33983992 33984042 -61288609 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 844 315 49 0 0 chr17 33984042 33984082 -61288569 + (GA)n Simple_repeat Simple_repeat 1 41 0 1 844 219 244 0 0 chr17 33984084 33984129 -61288522 - B1_Mm SINE Alu -17 130 86 1 844 1302 7 0 7 chr17 33984129 33984277 -61288374 + B1_Mm SINE Alu 1 147 0 1 844 315 0 0 0 chr17 33984277 33984312 -61288339 + (A)n Simple_repeat Simple_repeat 1 35 0 1 844 375 122 351 0 chr17 33984312 33984386 -61288265 - B1_Mur2 SINE Alu -48 101 2 1 844 297 250 12 116 chr17 33984386 33984422 -61288229 - B4A SINE B4 -205 87 61 1 844 249 220 0 0 chr17 33985995 33986045 -61286606 + ID_B1 SINE B4 99 148 -76 1 844 381 283 10 0 chr17 33986049 33986148 -61286503 + PB1D10 SINE Alu 6 105 -12 1 844 358 239 54 112 chr17 33986167 33986359 -61286292 - MER74A LTR ERVL -411 211 1 1 844 673 268 93 21 chr17 33986496 33986679 -61285972 + B4A SINE B4 36 232 -60 1 844 474 297 21 14 chr17 33986679 33986819 -61285832 + B4A SINE B4 1 141 -151 1 844 188 67 33 0 chr17 33986937 33986967 -61285684 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 844 226 244 0 0 chr17 33987388 33987433 -61285218 + GA-rich Low_complexity Low_complexity 2 46 0 1 844 434 101 14 0 chr17 33987539 33987608 -61285043 + (TCCA)n Simple_repeat Simple_repeat 3 72 0 1 844 425 259 18 9 chr17 33987823 33987936 -61284715 - PB1D10 SINE Alu -1 116 3 1 844 284 258 0 219 chr17 33988064 33988183 -61284468 - B1F2 SINE Alu -56 93 1 1 844 383 270 45 0 chr17 33988183 33988224 -61284427 - B4A SINE B4 -207 85 41 1 844 508 228 13 93 chr17 33988673 33988823 -61283828 - L1MB5 LINE L1 -17 6157 6020 1 844 414 237 41 0 chr17 33988824 33988921 -61283730 + PB1D10 SINE Alu 5 105 -12 1 844 3119 67 40 45 chr17 33988973 33989442 -61283209 + L1_Mus4 LINE L1 6168 6634 -2 1 844 1162 107 0 19 chr17 33989462 33989624 -61283027 + B2_Mm2 SINE B2 2 160 -35 1 844 855 108 0 0 chr17 33989626 33989755 -61282896 + (GGAA)n Simple_repeat Simple_repeat 3 131 0 1 844 286 164 86 141 chr17 33989756 33989884 -61282767 - L1MB8 LINE L1 -142 6036 5916 1 844 410 296 141 0 chr17 33989945 33990080 -61282571 - RSINE1 SINE B4 0 165 12 1 844 415 278 44 22 chr17 33990077 33990213 -61282438 - ID_B1 SINE B4 -1 223 85 1 844 225 242 0 0 chr17 33990251 33990270 -61282381 + T-rich Low_complexity Low_complexity 48 66 0 1 844 1295 111 21 10 chr17 33990270 33990462 -61282189 - B2_Mm2 SINE B2 0 195 2 1 844 225 242 0 0 chr17 33990462 33990508 -61282143 + T-rich Low_complexity Low_complexity 2 47 0 1 844 229 287 29 29 chr17 33990626 33990730 -61281921 - L1_Mur2 LINE L1 -59 5818 5715 1 844 2388 90 22 8 chr17 33990820 33991177 -61281474 + L1_Mus3 LINE L1 6277 6638 0 1 844 4322 58 26 0 chr17 33991180 33991874 -61280777 + L1VL2 LINE L1 809 1524 -2091 1 844 201 154 0 0 chr17 33991920 33991959 -61280692 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 844 710 202 8 16 chr17 33992216 33992342 -61280309 - B1_Mur2 SINE Alu -20 129 5 1 844 344 217 60 104 chr17 33992222 33992356 -61280295 - MT2B LTR ERVL -322 279 152 1 844 1677 21 0 0 chr17 33992635 33992822 -61279829 + B2_Mm1a SINE B2 1 187 -6 1 844 340 44 0 0 chr17 33993141 33993186 -61279465 + B1_Mm SINE Alu 103 147 0 1 844 5818 186 88 43 chr17 33993200 33994607 -61278044 + L1_Mur2 LINE L1 1303 2790 -3087 1 844 1162 75 0 0 chr17 33994607 33994753 -61277898 + B1_Mus1 SINE Alu 1 146 -2 1 844 5818 186 88 43 chr17 33994753 33994827 -61277824 + L1_Mur2 LINE L1 2791 2850 -3027 1 844 1039 144 86 19 chr17 33994843 33995083 -61277568 - RLTR9B LTR ERVK -118 291 3 1 844 1053 52 0 15 chr17 33995150 33995287 -61277364 - B1_Mus2 SINE Alu -1 146 12 1 844 4316 48 77 0 chr17 33995350 33995873 -61276778 - LTRIS2 LTR ERV1 -1 563 1 1 844 1151 83 0 0 chr17 33995911 33996056 -61276595 + B1_Mm SINE Alu 1 145 -2 1 844 807 198 224 0 chr17 33996311 33996618 -61276033 + Lx9 LINE L1 7239 7641 -3 1 844 1283 231 21 91 chr17 33996657 33997056 -61275595 + MT2B LTR ERVL 62 601 0 1 844 569 81 23 0 chr17 33997167 33997254 -61275397 + (GGGA)n Simple_repeat Simple_repeat 3 91 0 1 844 460 198 0 59 chr17 33997615 33997717 -61274934 - B1F SINE Alu 0 149 54 1 844 268 213 0 0 chr17 33997707 33997754 -61274897 - MTEa LTR MaLR -136 243 197 1 844 207 0 0 0 chr17 33998488 33998511 -61274140 + (TAAAA)n Simple_repeat Simple_repeat 5 27 0 1 844 569 282 0 22 chr17 33998645 33998779 -61273872 + B1F SINE Alu 8 138 -11 1 844 23 0 0 0 chr17 33998782 33998805 -61273846 + AT_rich Low_complexity Low_complexity 1 23 0 1 844 515 231 48 116 chr17 33998820 33998967 -61273684 + RSINE1 SINE B4 29 165 0 1 844 23 0 0 0 chr17 33998974 33998997 -61273654 + AT_rich Low_complexity Low_complexity 1 23 0 1 844 406 250 57 9 chr17 33999042 33999147 -61273504 + PB1D9 SINE Alu 1 110 -10 1 844 1495 28 16 6 chr17 33999242 33999425 -61273226 + B2_Mm2 SINE B2 2 186 -9 1 844 192 77 0 0 chr17 33999504 33999530 -61273121 + (CTGGGG)n Simple_repeat Simple_repeat 5 30 0 1 844 660 224 145 6 chr17 33999531 33999697 -61272954 + ID_B1 SINE B4 15 203 -21 1 844 981 96 73 0 chr17 33999722 33999858 -61272793 + B1_Mus2 SINE Alu 2 147 0 1 844 34 24 0 0 chr17 33999888 33999929 -61272722 + AT_rich Low_complexity Low_complexity 1 41 0 1 844 289 266 0 0 chr17 33999935 33999999 -61272652 + PB1D10 SINE Alu 24 87 -30 1 844 437 294 20 20 chr17 34000043 34000192 -61272459 + B1F SINE Alu 1 149 0 1 844 268 294 54 0 chr17 34000476 34000568 -61272083 + MER33 DNA MER1_type 5 101 -223 2 844 240 354 10 20 chr17 34000588 34000686 -61271965 + PB1 SINE Alu 1 97 -30 3 844 641 255 0 46 chr17 34001246 34001398 -61271253 + RSINE1 SINE B4 15 159 -6 4 844 218 341 23 12 chr17 34001663 34001749 -61270902 - BC1_Mm scRNA scRNA -59 93 7 5 844 360 223 286 0 chr17 34001863 34001975 -61270676 + RSINE1 SINE B4 3 146 -19 6 844 378 0 0 0 chr17 34001983 34002025 -61270626 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 844 421 205 115 109 chr17 34002109 34002301 -61270350 - B2_Mm2 SINE B2 0 195 3 8 844 824 201 23 89 chr17 34002656 34002789 -61269862 + RMER17C LTR ERVK 59 235 -175 9 844 781 54 18 0 chr17 34002789 34002900 -61269751 + (TC)n Simple_repeat Simple_repeat 1 113 0 1 844 824 199 25 87 chr17 34002900 34003057 -61269594 + RMER17C LTR ERVK 236 386 -24 9 844 1028 62 0 0 chr17 34003059 34003189 -61269462 - B1_Mus2 SINE Alu -16 131 2 1 844 1938 153 12 29 chr17 34003193 34003610 -61269041 + RMER17C LTR ERVK 1 410 0 1 844 283 229 0 0 chr17 34003622 34003683 -61268968 - B1F1 SINE Alu -88 61 1 1 844 22 0 0 0 chr17 34003745 34003767 -61268884 + GC_rich Low_complexity Low_complexity 1 22 0 1 844 369 58 0 0 chr17 34003995 34004047 -61268604 + (TGG)n Simple_repeat Simple_repeat 2 53 0 1 844 4313 14 0 0 chr17 34004086 34004579 -61268072 + MT2_Mm LTR ERVL 1 493 0 1 844 46543 15 0 0 chr17 34004579 34009938 -61262713 + MERVL-int LTR ERVL 1 5360 -125 1 844 379 167 46 35 chr17 34009938 34010025 -61262626 + ORR1A3-int LTR MaLR 553 640 -1323 1 844 301 0 0 0 chr17 34010025 34010063 -61262588 + MERVL-int LTR ERVL 5448 5485 0 1 844 4313 14 0 0 chr17 34010063 34010556 -61262095 + MT2_Mm LTR ERVL 1 493 0 1 844 531 231 46 26 chr17 34011123 34011274 -61261377 - B3A SINE B2 -1 197 44 1 844 258 81 0 0 chr17 34011376 34011413 -61261238 + (T)n Simple_repeat Simple_repeat 1 37 0 1 844 463 244 189 6 chr17 34011997 34012166 -61260485 + B3 SINE B2 2 201 -15 2 844 1168 87 27 5 chr17 34012200 34012357 -61260294 + B2_Mm1t SINE B2 2 160 -33 2 844 513 0 0 0 chr17 34012357 34012414 -61260237 + (TAAA)n Simple_repeat Simple_repeat 3 59 0 2 844 1124 61 0 7 chr17 34012418 34012567 -61260084 + B1_Mus1 SINE Alu 1 148 0 2 844 1168 87 27 5 chr17 34012567 34012589 -61260062 + B2_Mm1t SINE B2 161 185 -8 2 844 1109 176 11 107 chr17 34013015 34013140 -61259511 + MTD LTR MaLR 2 108 -311 2 844 486 73 0 24 chr17 34013140 34013224 -61259427 - L1Md_F2 LINE L1 0 6582 6501 2 844 1109 176 11 107 chr17 34013224 34013378 -61259273 + MTD LTR MaLR 109 254 -165 2 844 233 238 16 0 chr17 34013417 34013480 -61259171 + MTD LTR MaLR 350 413 -6 2 844 2876 38 30 0 chr17 34013480 34013852 -61258799 + L1Md_F3 LINE L1 6202 6584 0 2 844 774 221 81 10 chr17 34014303 34014500 -61258151 + B3 SINE B2 1 211 -5 2 844 805 218 0 0 chr17 34014519 34014661 -61257990 - B1_Mus2 SINE Alu 0 147 6 2 844 647 247 108 0 chr17 34014707 34014893 -61257758 + B3 SINE B2 1 206 -10 2 844 239 273 38 25 chr17 34015369 34015448 -61257203 + ID4 SINE ID 4 83 0 3 844 2202 135 36 27 chr17 34015586 34016028 -61256623 + RMER6A LTR ERVK 309 754 -2 3 844 957 152 220 0 chr17 34016028 34016205 -61256446 + B3 SINE B2 1 216 0 3 844 396 146 124 0 chr17 34016464 34016582 -61256069 - B3A SINE B2 -61 155 11 3 844 691 206 0 0 chr17 34016623 34016754 -61255897 - B1_Mur4 SINE Alu -9 141 11 3 844 286 257 8 103 chr17 34016659 34016776 -61255875 - MT2B LTR ERVL -344 257 152 3 844 1201 28 0 0 chr17 34017491 34017633 -61255018 - B1_Mus2 SINE Alu -5 142 1 3 844 1110 49 7 14 chr17 34017681 34017826 -61254825 + B1_Mus1 SINE Alu 1 144 -4 3 844 441 0 0 0 chr17 34017827 34017876 -61254775 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 3 844 192 40 0 0 chr17 34017880 34017905 -61254746 + (GAATG)n Simple_repeat Simple_repeat 1 25 0 3 844 1290 208 79 48 chr17 34018000 34018354 -61254297 + ORR1D1 LTR MaLR 1 365 -9 4 844 1015 25 2 0 chr17 34018529 34018664 -61253987 + B1_Mm SINE Alu 12 147 0 4 844 306 0 0 0 chr17 34018664 34018698 -61253953 + (A)n Simple_repeat Simple_repeat 1 34 0 4 844 1331 47 35 0 chr17 34018736 34018908 -61253743 - B2_Mm2 SINE B2 -14 181 4 4 844 437 223 35 9 chr17 34019653 34019766 -61252885 + PB1D10 SINE Alu 2 117 0 4 844 379 248 101 82 chr17 34020994 34021152 -61251499 + B4A SINE B4 33 193 -99 4 844 376 273 99 50 chr17 34022279 34022460 -61250191 + B3A SINE B2 9 198 0 4 844 1117 88 0 0 chr17 34022470 34022618 -61250033 + B1_Mus1 SINE Alu 1 148 0 4 844 1033 140 6 6 chr17 34022949 34023129 -61249522 + B2_Mm2 SINE B2 1 180 -15 4 844 246 179 0 0 chr17 34023872 34023928 -61248723 + T-rich Low_complexity Low_complexity 4 59 0 4 844 811 162 7 0 chr17 34023928 34024076 -61248575 - B1_Mur3 SINE Alu 0 149 1 5 844 1018 55 7 52 chr17 34024104 34024258 -61248393 + B1_Mus1 SINE Alu 2 148 0 5 844 1004 84 21 0 chr17 34024310 34024452 -61248199 - B1_Mm SINE Alu 0 147 3 5 844 393 248 114 0 chr17 34024524 34024629 -61248022 + PB1 SINE Alu 7 123 -4 5 844 3055 51 5 10 chr17 34025083 34025481 -61247170 - MTA_Mm LTR MaLR 0 396 1 5 844 216 0 0 0 chr17 34025600 34025624 -61247027 + (A)n Simple_repeat Simple_repeat 1 24 0 5 844 349 265 30 20 chr17 34025698 34025798 -61246853 + PB1 SINE Alu 25 125 -2 5 844 878 102 0 0 chr17 34025951 34026078 -61246573 + B1_Mus1 SINE Alu 1 127 -21 5 844 213 19 35 69 chr17 34026097 34026155 -61246496 + (CAA)n Simple_repeat Simple_repeat 2 57 0 5 844 188 265 95 29 chr17 34026524 34026629 -61246022 + L2a LINE L2 3279 3390 -36 5 844 360 0 0 0 chr17 34027226 34027266 -61245385 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 844 217 290 0 46 chr17 34028120 34028185 -61244466 + RSINE1 SINE B4 65 126 -39 6 844 350 159 47 8 chr17 34028198 34028325 -61244326 + (TA)n Simple_repeat Simple_repeat 1 132 0 6 844 555 165 6 8 chr17 34028351 34028470 -61244181 - B1_Mus2 SINE Alu 0 147 3 6 844 782 171 13 46 chr17 34028515 34028668 -61243983 + B1_Mur3 SINE Alu 1 148 -1 6 844 198 103 0 0 chr17 34028671 34028700 -61243951 + (CATA)n Simple_repeat Simple_repeat 4 32 0 6 844 1195 41 0 0 chr17 34028743 34028889 -61243762 - B1_Mus2 SINE Alu 0 147 2 6 844 1303 77 60 0 chr17 34028892 34029075 -61243576 - B2_Mm2 SINE B2 0 195 2 6 844 459 257 144 92 chr17 34029634 34030045 -61242606 - RLTR42-int LTR ERVK -3253 2884 2453 6 844 2084 110 22 0 chr17 34030045 34030364 -61242287 + ORR1A2 LTR MaLR 2 327 0 6 844 8675 132 101 81 chr17 34030365 34030609 -61242042 + ORR1A2-int LTR MaLR 10 320 -1643 6 844 1263 14 0 0 chr17 34030609 34030756 -61241895 + B1_Mm SINE Alu 1 147 0 7 844 222 37 0 0 chr17 34030764 34030791 -61241860 + (GA)n Simple_repeat Simple_repeat 2 28 0 7 844 1103 58 0 0 chr17 34030798 34030937 -61241714 + B1_Mus1 SINE Alu 5 143 -5 7 844 8675 132 101 81 chr17 34030937 34032228 -61240423 + ORR1A2-int LTR MaLR 321 1684 -279 6 844 1079 95 0 0 chr17 34032228 34032375 -61240276 + B1_Mus2 SINE Alu 1 147 0 7 844 8675 132 101 81 chr17 34032375 34032735 -61239916 + ORR1A2-int LTR MaLR 1685 1963 0 6 844 1919 114 39 10 chr17 34032735 34033046 -61239605 + ORR1A2 LTR MaLR 1 320 -7 6 844 624 236 109 45 chr17 34033067 34033141 -61239510 - RLTR42-int LTR ERVK -3356 2166 2079 6 844 253 47 23 23 chr17 34033141 34033185 -61239466 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 7 844 1014 82 0 0 chr17 34033185 34033319 -61239332 - B1_Mus1 SINE Alu -13 135 2 7 844 624 236 109 45 chr17 34033319 34033509 -61239142 - RLTR42-int LTR ERVK -3444 2078 1885 6 844 213 39 0 0 chr17 34033525 34033551 -61239100 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 7 844 307 142 0 22 chr17 34033565 34033631 -61239020 - B2_Mm2 SINE B2 -107 109 47 7 844 1120 124 23 0 chr17 34033674 34033851 -61238800 - B2_Mm2 SINE B2 -10 185 5 7 844 801 145 54 54 chr17 34034167 34034335 -61238316 - B2_Mm2 SINE B2 -19 176 9 7 844 189 0 0 0 chr17 34034649 34034670 -61237981 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 8 844 1142 22 14 0 chr17 34034672 34034811 -61237840 - B1_Mus2 SINE Alu -6 141 1 8 844 272 244 12 37 chr17 34034888 34034969 -61237682 + RLTR15 LTR ERVK 186 264 -95 8 844 346 257 61 48 chr17 34035066 34035213 -61237438 - RLTR42-int LTR ERVK -3915 1607 1459 6 844 1531 232 36 24 chr17 34035190 34035609 -61237042 - RLTR42-int LTR ERVK -3995 1527 1104 6 844 1228 169 32 0 chr17 34036106 34036325 -61236326 + RLTR14 LTR ERV1 7 232 -150 8 844 649 152 18 0 chr17 34036378 34036490 -61236161 + RLTR14 LTR ERV1 243 356 -26 8 844 251 244 0 24 chr17 34036969 34036989 -61235662 + ORR1B1-int LTR MaLR 630 646 -863 8 844 796 63 0 0 chr17 34036989 34037100 -61235551 + B1_Mus1 SINE Alu 1 111 -37 8 844 272 120 0 107 chr17 34037109 34037165 -61235486 + B2_Mm2 SINE B2 3 52 -143 8 844 433 88 29 0 chr17 34037145 34037213 -61235438 - RLTR41 LTR ERV1 -376 70 1 8 844 617 144 0 0 chr17 34037585 34037689 -61234962 + B1_Mur1 SINE Alu 38 141 -8 8 844 587 164 16 49 chr17 34037713 34037835 -61234816 - PB1D9 SINE Alu -2 118 1 8 844 1158 48 14 0 chr17 34037849 34037995 -61234656 - B1_Mus1 SINE Alu 0 148 1 9 844 538 294 29 23 chr17 34038007 34038181 -61234470 - ID_B1 SINE B4 -1 223 49 9 844 706 149 117 33 chr17 34038387 34038567 -61234084 + B2_Mm2 SINE B2 1 195 0 9 844 1063 58 29 0 chr17 34038567 34038704 -61233947 + B1_Mus2 SINE Alu 1 141 -6 9 844 1559 247 58 76 chr17 34038736 34039249 -61233402 + RLTR18B LTR ERVK 7 510 -2 9 844 195 42 0 0 chr17 34039383 34039407 -61233244 + (T)n Simple_repeat Simple_repeat 1 24 0 9 844 772 66 215 0 chr17 34039409 34039530 -61233121 - B1_Mm SINE Alu 0 147 1 9 844 307 265 10 30 chr17 34039656 34039757 -61232894 - MT2B LTR ERVL -305 296 198 9 844 457 199 18 0 chr17 34039672 34039786 -61232865 - B1_Mur1 SINE Alu -22 125 12 9 844 222 37 0 0 chr17 34039797 34039824 -61232827 + (T)n Simple_repeat Simple_repeat 1 27 0 9 844 1008 73 0 0 chr17 34039826 34039963 -61232688 - B1_Mm SINE Alu 0 147 11 1 844 180 0 0 0 chr17 34039995 34040015 -61232636 + (A)n Simple_repeat Simple_repeat 1 20 0 1 844 746 180 20 47 chr17 34040045 34040241 -61232410 + B3 SINE B2 2 193 -2 1 844 1697 181 108 13 chr17 34040220 34040617 -61232034 + RMER4A LTR ERVK 32 466 0 1 844 1077 63 21 0 chr17 34041303 34041446 -61231205 - B1_Mm SINE Alu 0 147 2 1 844 1998 146 12 29 chr17 34041450 34041867 -61230784 + RMER17C LTR ERVK 1 410 0 1 844 292 213 0 0 chr17 34041879 34041940 -61230711 - B1F1 SINE Alu -88 61 1 1 844 439 31 31 0 chr17 34042258 34042323 -61230328 + (TGG)n Simple_repeat Simple_repeat 2 68 0 1 844 547 238 46 26 chr17 34042924 34043075 -61229576 - B3A SINE B2 -1 197 44 1 844 1223 76 64 0 chr17 34043273 34043444 -61229207 - B2_Mm2 SINE B2 -12 183 2 1 844 306 287 93 14 chr17 34043455 34043675 -61228976 - L1_Mur3 LINE L1 -455 5845 5589 1 844 284 246 53 40 chr17 34044333 34044409 -61228242 - Lx8 LINE L1 -253 7220 7144 1 844 687 137 26 0 chr17 34044427 34044544 -61228107 - PB1D9 SINE Alu 0 120 1 1 844 1280 99 16 5 chr17 34044558 34044751 -61227900 - B2_Mm2 SINE B2 0 195 1 1 844 254 343 38 29 chr17 34044932 34045037 -61227614 - B3A SINE B2 -6 192 87 1 844 183 80 0 0 chr17 34045234 34045259 -61227392 + (CACCC)n Simple_repeat Simple_repeat 2 26 0 1 844 489 198 0 38 chr17 34047622 34047727 -61224924 - PB1D7 SINE Alu -8 112 12 1 844 1086 91 77 28 chr17 34047728 34047909 -61224742 + B2_Mm2 SINE B2 2 191 -4 1 844 1135 54 7 0 chr17 34047909 34048055 -61224596 + B1_Mus1 SINE Alu 1 148 0 1 844 252 167 0 0 chr17 34049585 34049633 -61223018 + (ATG)n Simple_repeat Simple_repeat 3 50 0 1 844 270 81 0 0 chr17 34049640 34049677 -61222974 + (GGA)n Simple_repeat Simple_repeat 2 38 0 1 844 656 127 9 0 chr17 34049839 34049949 -61222702 + (TCCC)n Simple_repeat Simple_repeat 2 112 0 1 844 1515 42 5 0 chr17 34049959 34050150 -61222501 - B2_Mm1t SINE B2 0 193 2 1 844 1437 165 126 86 chr17 34051136 34051180 -61221471 + RMER4A LTR ERVK 1 42 -424 1 844 704 158 79 7 chr17 34051180 34051320 -61221331 + B1_Mur4 SINE Alu 1 150 0 1 844 1437 165 126 86 chr17 34051320 34051719 -61220932 + RMER4A LTR ERVK 43 462 -4 1 844 369 0 0 0 chr17 34051719 34051760 -61220891 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 844 462 168 110 42 chr17 34051765 34051883 -61220768 + B1_Mur2 SINE Alu 24 149 0 1 844 816 241 19 10 chr17 34051888 34052093 -61220558 - B3 SINE B2 -7 209 3 1 844 748 186 14 20 chr17 34052108 34052256 -61220395 - B1_Mus2 SINE Alu 0 147 1 1 844 28 35 0 49 chr17 34053190 34053251 -61219400 + GC_rich Low_complexity Low_complexity 1 58 0 1 844 201 193 16 66 chr17 34053293 34053354 -61219297 + G-rich Low_complexity Low_complexity 2 59 0 1 844 198 316 132 22 chr17 34053546 34053682 -61218969 + MIRc SINE MIR 16 166 -102 1 844 610 229 46 41 chr17 34058650 34058846 -61213805 - B3A SINE B2 -1 197 1 1 844 686 213 243 0 chr17 34059007 34059176 -61213475 + B3 SINE B2 1 210 -6 1 844 369 0 0 0 chr17 34059511 34059552 -61213099 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1 844 1130 71 0 0 chr17 34059553 34059707 -61212944 - B2_Mm2 SINE B2 -41 154 1 1 844 353 231 157 0 chr17 34059886 34060020 -61212631 + Lx9 LINE L1 7483 7637 -7 1 844 1066 103 14 0 chr17 34060315 34060461 -61212190 - B1_Mus1 SINE Alu 0 148 1 1 844 1412 73 10 30 chr17 34060465 34060662 -61211989 - B2_Mm2 SINE B2 -2 193 1 1 844 395 91 39 13 chr17 34060759 34060837 -61211814 - RMER4A LTR ERVK -1 465 386 1 844 656 56 0 11 chr17 34060837 34060927 -61211724 + (GA)n Simple_repeat Simple_repeat 1 89 0 1 844 1542 171 55 18 chr17 34060931 34061259 -61211392 - RMER4A LTR ERVK -124 342 3 1 844 361 286 70 18 chr17 34061297 34061411 -61211240 - PB1D7 SINE Alu 0 120 1 1 844 277 280 28 65 chr17 34061681 34061788 -61210863 + B1F SINE Alu 40 142 -7 1 844 744 94 0 0 chr17 34061788 34061894 -61210757 + (GA)n Simple_repeat Simple_repeat 2 107 0 1 844 297 0 0 0 chr17 34061894 34061926 -61210725 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 844 657 240 129 0 chr17 34061933 34062104 -61210547 + B3 SINE B2 9 201 -15 1 844 343 224 59 0 chr17 34064067 34064152 -61208499 - ID_B1 SINE B4 -4 220 131 1 844 1239 55 0 0 chr17 34064152 34064298 -61208353 - B1_Mus1 SINE Alu -2 146 1 1 844 606 302 81 0 chr17 34064311 34064460 -61208191 - RSINE1 SINE B4 -2 163 3 1 844 355 284 36 27 chr17 34064494 34064606 -61208045 - RSINE1 SINE B4 0 165 53 1 844 553 191 40 66 chr17 34065251 34065402 -61207249 - B1_Mur2 SINE Alu 0 149 3 1 844 1198 74 0 0 chr17 34065415 34065563 -61207088 - B1_Mus1 SINE Alu 0 148 1 1 844 543 274 20 14 chr17 34065590 34065738 -61206913 + B1_Mur1 SINE Alu 1 149 0 1 844 490 151 454 0 chr17 34065802 34065954 -61206697 + URR1B DNA MER1_type 5 225 0 1 844 30 0 0 0 chr17 34068787 34068817 -61203834 + AT_rich Low_complexity Low_complexity 1 30 0 1 844 378 79 13 26 chr17 34070920 34070998 -61201653 + (TG)n Simple_repeat Simple_repeat 1 77 0 1 844 882 73 11 43 chr17 34071024 34071210 -61201441 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 844 310 259 0 36 chr17 34071479 34071563 -61201088 + ID4_ SINE ID 3 83 0 1 844 312 250 0 71 chr17 34071660 34071772 -61200879 + PB1D9 SINE Alu 17 120 0 1 844 1007 122 0 13 chr17 34073249 34073399 -61199252 - B1_Mus1 SINE Alu 0 148 1 1 844 258 91 0 0 chr17 34073399 34073416 -61199235 + (T)n Simple_repeat Simple_repeat 1 17 0 1 844 780 51 271 0 chr17 34073416 34073534 -61199117 - B1_Mur4 SINE Alu 0 150 1 1 844 258 91 0 0 chr17 34073534 34073560 -61199091 + (T)n Simple_repeat Simple_repeat 1 26 0 1 844 577 144 154 41 chr17 34073653 34073776 -61198875 - B1_Mus1 SINE Alu -11 137 1 1 844 180 0 0 0 chr17 34074367 34074387 -61198264 + (CCCCAG)n Simple_repeat Simple_repeat 3 22 0 1 844 1500 39 61 0 chr17 34074946 34074966 -61197685 - B2_Mm1t SINE B2 -1 192 162 1 844 414 0 0 0 chr17 34074966 34075012 -61197639 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1 844 1500 39 61 0 chr17 34075012 34075172 -61197479 - B2_Mm1t SINE B2 -32 161 2 1 844 849 53 75 15 chr17 34075291 34075424 -61197227 + B1_Mus2 SINE Alu 7 147 0 1 844 432 267 37 18 chr17 34076261 34076294 -61196357 + ID_B1 SINE B4 58 219 -73 1 844 589 202 50 0 chr17 34076294 34076413 -61196238 + B1_Mur3 SINE Alu 2 126 -23 1 845 234 0 0 0 chr17 34078882 34078908 -61193743 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 845 503 188 10 10 chr17 34079464 34079561 -61193090 - B3 SINE B2 0 216 120 1 845 1375 111 11 0 chr17 34079561 34079751 -61192900 + B2_Mm1t SINE B2 1 192 -1 1 845 360 286 55 83 chr17 34079766 34079911 -61192740 - B3A SINE B2 -57 141 1 1 845 445 247 37 35 chr17 34079959 34080074 -61192577 - B4A SINE B4 -83 141 1 1 845 1303 73 85 0 chr17 34080900 34080917 -61191734 - B2_Mm1t SINE B2 -1 192 176 1 845 207 0 0 0 chr17 34080917 34080940 -61191711 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 1 845 1303 73 85 0 chr17 34080940 34081099 -61191552 - B2_Mm1t SINE B2 -18 175 2 1 845 241 289 156 0 chr17 34081106 34081196 -61191455 - PB1 SINE Alu -2 125 22 1 845 256 217 67 0 chr17 34081239 34081299 -61191352 - tRNA-Ala-GCY_ tRNA tRNA -10 65 2 1 845 1088 101 0 39 chr17 34082338 34082493 -61190158 - B1_Mur3 SINE Alu 0 149 1 1 845 338 269 0 0 chr17 34082507 34082585 -61190066 + B1F SINE Alu 26 103 -46 1 845 1003 72 36 0 chr17 34082649 34082787 -61189864 - B1_Mus2 SINE Alu 0 147 5 1 845 1459 88 16 0 chr17 34082808 34083000 -61189651 - B2_Mm2 SINE B2 0 195 1 1 845 367 256 142 67 chr17 34083731 34083865 -61188786 - B1_Mur1 SINE Alu -4 145 2 1 845 240 308 49 123 chr17 34083759 34083881 -61188770 - MT2B LTR ERVL -337 264 152 1 845 238 291 89 80 chr17 34083782 34083894 -61188757 - ID_B1 SINE B4 -49 175 63 1 845 246 32 0 0 chr17 34084127 34084158 -61188493 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1 845 1182 57 0 0 chr17 34084160 34084301 -61188350 - B1_Mm SINE Alu -6 141 1 1 845 562 118 181 63 chr17 34084304 34084431 -61188220 - B1_Mus2 SINE Alu 0 147 6 1 845 379 196 144 0 chr17 34084920 34085017 -61187634 + PB1D9 SINE Alu 9 119 -1 1 845 366 256 135 8 chr17 34086361 34086487 -61186164 + RSINE1 SINE B4 8 149 -16 1 845 360 0 0 0 chr17 34086487 34086527 -61186124 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 845 604 178 171 0 chr17 34089565 34089711 -61182940 - B2_Mm2 SINE B2 -23 172 2 1 845 720 167 198 11 chr17 34089713 34089895 -61182756 - B3 SINE B2 0 216 1 1 845 435 220 228 19 chr17 34090201 34090363 -61182288 + B3 SINE B2 2 197 -19 1 845 1223 55 0 0 chr17 34090726 34090872 -61181779 + B1_Mus2 SINE Alu 2 147 0 1 845 385 252 56 24 chr17 34091022 34091148 -61181503 - B1_Mm SINE Alu 0 147 18 1 845 265 337 133 18 chr17 34093334 34093564 -61179087 + MIR SINE MIR 4 259 -3 1 845 26 0 0 0 chr17 34094071 34094097 -61178554 + AT_rich Low_complexity Low_complexity 1 26 0 1 845 1181 41 13 20 chr17 34094097 34094246 -61178405 - B1_Mus1 SINE Alu 0 148 1 1 845 646 319 134 25 chr17 34094287 34094653 -61177998 - MER44B DNA MER2_type -116 434 29 1 845 278 106 21 0 chr17 34095343 34095390 -61177261 + (TCC)n Simple_repeat Simple_repeat 3 50 0 1 845 312 324 19 0 chr17 34095791 34095832 -61176819 + B4A SINE B4 44 86 -206 2 845 474 216 41 0 chr17 34095832 34095929 -61176722 + B1F SINE Alu 1 101 -48 2 845 662 255 35 0 chr17 34096426 34096571 -61176080 + ID_B1 SINE B4 8 157 -67 2 845 376 237 72 0 chr17 34096503 34096600 -61176051 + PB1D10 SINE Alu 6 109 -8 2 845 451 171 0 0 chr17 34096607 34096683 -61175968 + U6 snRNA snRNA 1 76 -31 2 845 712 161 0 0 chr17 34096720 34096832 -61175819 + PB1D9 SINE Alu 2 113 -7 2 845 285 128 0 0 chr17 34097284 34097331 -61175320 + (GGA)n Simple_repeat Simple_repeat 1 47 0 2 845 207 211 0 19 chr17 34097532 34097585 -61175066 + T-rich Low_complexity Low_complexity 3 54 0 2 845 1539 52 16 10 chr17 34097585 34097778 -61174873 - B2_Mm2 SINE B2 0 195 2 2 845 382 329 0 29 chr17 34100340 34100515 -61172136 + (TG)n Simple_repeat Simple_repeat 1 170 0 2 845 259 265 0 23 chr17 34100557 34100699 -61171952 + (TG)n Simple_repeat Simple_repeat 1 138 0 2 845 253 218 5 82 chr17 34100710 34100905 -61171746 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 845 250 241 0 17 chr17 34100920 34100979 -61171672 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 845 194 279 0 25 chr17 34100990 34101152 -61171499 + (TG)n Simple_repeat Simple_repeat 1 158 0 2 845 296 281 0 20 chr17 34101163 34101261 -61171390 + (TG)n Simple_repeat Simple_repeat 1 96 0 2 845 216 217 0 32 chr17 34101272 34101358 -61171293 + (TG)n Simple_repeat Simple_repeat 1 84 0 2 845 2182 102 12 18 chr17 34101358 34101697 -61170954 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 845 216 217 0 32 chr17 34101697 34101705 -61170946 + (TG)n Simple_repeat Simple_repeat 1 8 0 2 845 384 278 0 23 chr17 34101720 34101849 -61170802 + (TG)n Simple_repeat Simple_repeat 1 126 0 2 845 420 237 82 22 chr17 34103873 34103890 -61168761 + CYRA11_Mm Unknown Y-chromosome 154 178 -439 2 845 651 114 52 37 chr17 34103890 34104010 -61168641 - URR1B DNA MER1_type 0 225 99 2 845 1214 61 0 13 chr17 34104010 34104159 -61168492 + B1_Mus2 SINE Alu 1 147 0 2 845 651 114 52 37 chr17 34104159 34104174 -61168477 - URR1B DNA MER1_type -127 98 88 2 845 1316 78 0 0 chr17 34104175 34104354 -61168297 + B2_Mm1a SINE B2 1 179 -14 2 845 920 71 158 0 chr17 34104380 34104507 -61168144 + B1_Mm SINE Alu 1 147 0 2 845 572 170 0 0 chr17 34104518 34104612 -61168039 - URR1B DNA MER1_type -120 105 12 2 845 884 145 7 0 chr17 34104643 34104788 -61167863 - B1_Mus1 SINE Alu -1 147 2 2 845 276 220 231 0 chr17 34105198 34105289 -61167362 - B1_Mur2 SINE Alu -19 130 19 2 845 883 182 60 6 chr17 34105974 34106156 -61166495 + B2_Mm2 SINE B2 3 194 -1 2 845 761 225 95 11 chr17 34106461 34106650 -61166001 - B3 SINE B2 -11 205 1 2 845 1734 244 45 133 chr17 34106932 34107602 -61165049 - RMER19C LTR ERVK 0 611 1 2 845 295 276 0 26 chr17 34107778 34107856 -61164795 + ID4_ SINE ID 7 82 -1 2 845 282 330 22 11 chr17 34107856 34107870 -61164781 + ID_B1 SINE B4 7 99 -125 2 845 506 293 36 54 chr17 34107876 34108042 -61164609 + RSINE1 SINE B4 3 165 0 2 845 619 312 0 0 chr17 34108309 34108469 -61164182 - RSINE1 SINE B4 -4 161 2 2 845 2721 170 107 6 chr17 34108669 34109184 -61163467 + RMER2 LTR ERV1 1 567 0 2 845 251 311 9 112 chr17 34109229 34109241 -61163410 - MTEa LTR MaLR 0 379 369 2 845 1138 185 290 14 chr17 34109241 34109531 -61163120 + ORR1D2 LTR MaLR 1 370 0 2 845 251 311 9 112 chr17 34109531 34109608 -61163043 - MTEa LTR MaLR -11 368 302 2 845 1528 166 174 16 chr17 34109608 34109975 -61162676 + RMER21A LTR ERV1 1 425 -522 2 845 453 138 0 0 chr17 34110057 34110151 -61162500 + (TC)n Simple_repeat Simple_repeat 1 94 0 2 845 2160 156 54 132 chr17 34110517 34111094 -61161557 + RMER19B LTR ERVK 367 898 -4 2 845 225 65 0 0 chr17 34112220 34112251 -61160400 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 845 977 89 15 0 chr17 34112251 34112386 -61160265 - B1_Mm SINE Alu -9 138 2 2 845 297 0 0 0 chr17 34113857 34113890 -61158761 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2 845 258 264 0 0 chr17 34113893 34113938 -61158713 + A-rich Low_complexity Low_complexity 1 45 0 2 845 1098 87 110 0 chr17 34113938 34114111 -61158540 + B2_Mm1t SINE B2 2 193 0 2 845 258 264 0 0 chr17 34114111 34114137 -61158514 + A-rich Low_complexity Low_complexity 46 71 0 2 845 262 354 125 26 chr17 34116412 34116676 -61155975 - Tigger7 DNA MER2_type -8 2483 2194 2 845 225 330 119 0 chr17 34116688 34116806 -61155845 - Tigger7 DNA MER2_type -2219 272 141 2 845 346 194 122 104 chr17 34116991 34117106 -61155545 - PB1D9 SINE Alu -3 117 1 2 845 561 221 54 0 chr17 34117689 34117877 -61154774 - ORR1D1 LTR MaLR -178 200 1 2 845 2003 110 130 30 chr17 34118213 34118643 -61154008 + IAPLTR2_Mm LTR ERVK 1 473 -2 2 845 331 237 165 38 chr17 34118645 34118803 -61153848 + B3 SINE B2 37 214 -2 2 845 379 260 85 44 chr17 34119588 34119849 -61152802 + MT2B LTR ERVL 2 366 -235 2 845 1530 180 13 16 chr17 34119822 34120125 -61152526 + RMER19A LTR ERVK 422 857 -45 2 845 275 72 0 23 chr17 34120125 34120168 -61152483 + (TTA)n Simple_repeat Simple_repeat 1 42 0 2 845 641 272 38 114 chr17 34120168 34120179 -61152472 + RMER19A LTR ERVK 858 870 -32 2 845 347 318 48 68 chr17 34120190 34120252 -61152399 - RMER4A LTR ERVK -9 457 392 2 845 988 90 14 0 chr17 34120252 34120396 -61152255 - B1_Mus1 SINE Alu -1 147 2 2 845 347 318 48 68 chr17 34120396 34120539 -61152112 - RMER4A LTR ERVK -75 391 256 2 845 1394 274 95 13 chr17 34120541 34121390 -61151261 - MYSERV-int LTR ERVK -1438 5112 4195 2 845 4042 173 39 25 chr17 34121409 34122235 -61150416 + MERVL_2A-int LTR ERVL 905 1741 -4020 2 845 1204 155 135 70 chr17 34122237 34122429 -61150222 - ORR1C1 LTR MaLR 0 378 176 2 845 329 82 33 0 chr17 34122429 34122490 -61150161 + (CAGAGA)n Simple_repeat Simple_repeat 2 64 0 2 845 1204 155 135 70 chr17 34122490 34122652 -61149999 - ORR1C1 LTR MaLR -203 175 1 2 845 3003 193 32 67 chr17 34122652 34122842 -61149809 - ORR1C1-int LTR MaLR 0 1509 1327 2 845 1148 41 14 0 chr17 34122842 34122987 -61149664 + B1_Mm SINE Alu 1 147 0 2 845 3003 193 32 67 chr17 34122987 34123540 -61149111 - ORR1C1-int LTR MaLR -183 1326 792 2 845 2073 155 42 22 chr17 34123565 34123968 -61148683 - Lx2B LINE L1 -4 6996 6586 2 845 663 137 33 73 chr17 34124040 34124190 -61148461 + RMER4A LTR ERVK 323 466 0 2 845 518 132 0 0 chr17 34124190 34124273 -61148378 - B1_Mus2 SINE Alu -19 128 46 2 845 228 286 0 31 chr17 34124220 34124285 -61148366 - RLTR25A LTR ERVK -531 572 510 2 845 3667 177 16 0 chr17 34124320 34124991 -61147660 + MERVL_2A-int LTR ERVL 1738 2419 -3342 2 845 528 138 0 33 chr17 34124987 34125077 -61147574 - MERVL_2A-int LTR ERVL -3233 2528 2442 2 845 10817 202 58 19 chr17 34125071 34127495 -61145156 + MERVL_2A-int LTR ERVL 2873 5391 -370 2 845 242 118 0 0 chr17 34127498 34127532 -61145119 + (A)n Simple_repeat Simple_repeat 1 34 0 2 845 1103 71 0 0 chr17 34127532 34127673 -61144978 + B1_Mus2 SINE Alu 1 141 -6 2 845 273 119 0 0 chr17 34127675 34127717 -61144934 + (GGA)n Simple_repeat Simple_repeat 3 44 0 2 845 1262 74 6 0 chr17 34127717 34127892 -61144759 + (GAA)n Simple_repeat Simple_repeat 3 178 0 2 845 406 301 50 30 chr17 34127923 34128125 -61144526 + RLTR15 LTR ERVK 135 340 -19 2 845 835 192 84 5 chr17 34128135 34128349 -61144302 + MERVL_2A-int LTR ERVL 5387 5617 -144 2 845 255 226 45 45 chr17 34128349 34128437 -61144214 + ORR1A3-int LTR MaLR 552 639 -1324 2 845 336 188 22 45 chr17 34128490 34128579 -61144072 - RLTR12B LTR ERVK -13 515 429 2 845 242 196 0 0 chr17 34128730 34128781 -61143870 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 845 252 164 34 180 chr17 34128786 34128845 -61143806 + PB1D10 SINE Alu 22 69 -48 2 845 676 207 76 27 chr17 34128845 34129029 -61143622 + B2_Mm2 SINE B2 1 193 -2 2 845 252 164 34 180 chr17 34129029 34129058 -61143593 + PB1D10 SINE Alu 70 97 -20 2 845 21 0 0 0 chr17 34129309 34129330 -61143321 + AT_rich Low_complexity Low_complexity 1 21 0 2 845 871 200 83 10 chr17 34129330 34129522 -61143129 - B3 SINE B2 -10 206 1 2 845 1293 251 58 17 chr17 34129804 34130149 -61142502 - RMER19C LTR ERVK 0 611 253 2 845 2390 154 137 18 chr17 34130155 34130584 -61142067 + RMER2 LTR ERV1 5 493 -74 2 845 1243 85 5 26 chr17 34130584 34130778 -61141873 + B2_Mm1t SINE B2 2 191 -2 2 845 2390 154 137 18 chr17 34130778 34130851 -61141800 + RMER2 LTR ERV1 494 567 0 2 845 1168 120 16 0 chr17 34131083 34131266 -61141385 + B2_Mm2 SINE B2 2 187 -8 2 845 609 167 28 38 chr17 34131308 34131458 -61141193 + RMER19B LTR ERVK 1 209 -402 2 845 1284 25 0 0 chr17 34131458 34131617 -61141034 + B2_Mm1a SINE B2 2 160 -33 2 845 305 59 39 0 chr17 34131617 34131668 -61140983 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 2 845 2715 185 62 110 chr17 34131670 34132461 -61140190 + RMER19B LTR ERVK 169 898 -4 2 845 182 62 0 30 chr17 34133002 34133035 -61139616 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 2 845 306 127 0 0 chr17 34135405 34135431 -61137220 + (A)n Simple_repeat Simple_repeat 1 26 0 2 845 1076 82 0 0 chr17 34135431 34135577 -61137074 + B1_Mm SINE Alu 2 147 0 2 845 306 127 0 0 chr17 34135577 34135605 -61137046 + (A)n Simple_repeat Simple_repeat 1 28 0 2 845 213 39 0 0 chr17 34135607 34135633 -61137018 + (GA)n Simple_repeat Simple_repeat 1 26 0 2 845 26 0 0 0 chr17 34136520 34136546 -61136105 + GC_rich Low_complexity Low_complexity 1 26 0 2 845 483 18 0 0 chr17 34137889 34137945 -61134706 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 845 275 354 124 16 chr17 34138020 34138270 -61134381 - Tigger7 DNA MER2_type -8 2483 2207 2 845 678 203 6 83 chr17 34138803 34138930 -61133721 - B1_Mur3 SINE Alu 0 149 31 2 845 1984 134 97 8 chr17 34138930 34139292 -61133359 - ORR1B1 LTR MaLR 0 394 1 2 845 678 203 6 83 chr17 34139292 34139320 -61133331 - B1_Mur3 SINE Alu -119 30 6 2 845 1117 233 118 3 chr17 34139324 34139656 -61132995 - ORR1D1 LTR MaLR -4 370 1 2 845 514 215 52 21 chr17 34139957 34140131 -61132520 + B3 SINE B2 3 184 -11 2 845 260 228 74 25 chr17 34140892 34140973 -61131678 + MT2B LTR ERVL 31 115 -418 2 845 460 198 59 17 chr17 34141120 34141238 -61131413 + MT2B LTR ERVL 277 399 -202 2 845 453 319 58 25 chr17 34141243 34141520 -61131131 - RLTR15 LTR ERVK -32 327 42 2 845 1203 99 0 35 chr17 34141680 34141878 -61130773 + B2_Mm2 SINE B2 2 192 -3 2 845 37 76 0 0 chr17 34141906 34141985 -61130666 + AT_rich Low_complexity Low_complexity 1 79 0 2 845 1059 88 7 0 chr17 34142000 34142147 -61130504 - B1_Mus1 SINE Alu 0 148 1 2 845 4684 224 25 28 chr17 34142170 34143327 -61129324 - MYSERV-int LTR ERVK -84 6466 5309 2 845 3164 164 147 5 chr17 34143327 34143972 -61128679 + RMER19A LTR ERVK 1 737 0 2 845 4684 224 25 28 chr17 34143972 34144001 -61128650 - MYSERV-int LTR ERVK -1242 5308 5283 2 845 392 187 43 11 chr17 34144011 34144103 -61128548 - ORR1C1 LTR MaLR -272 106 12 2 845 812 76 0 32 chr17 34144099 34144222 -61128429 + B1_Mus1 SINE Alu 29 147 -1 2 845 3011 201 25 19 chr17 34144224 34144973 -61127678 + MYSERV6-int LTR ERVK 8235 8907 -52 2 845 2656 157 46 46 chr17 34144978 34145331 -61127320 + RLTR12A LTR ERVK 1 355 -213 2 845 1142 49 0 7 chr17 34145331 34145475 -61127176 + B1_Mm SINE Alu 3 145 -2 3 845 207 0 0 0 chr17 34145475 34145498 -61127153 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 845 2656 157 46 46 chr17 34145498 34145711 -61126940 + RLTR12A LTR ERVK 356 567 -1 2 845 279 54 0 0 chr17 34145731 34145768 -61126883 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 845 1094 211 116 7 chr17 34145771 34146048 -61126603 + RMER5 LTR ERV1 223 529 -5 3 845 547 197 120 8 chr17 34146462 34146595 -61126056 - B1_Mur2 SINE Alu 0 149 2 3 845 272 245 80 89 chr17 34146502 34146614 -61126037 - MT2B LTR ERVL -344 257 147 3 845 540 152 9 19 chr17 34146686 34146793 -61125858 - B2_Mm2 SINE B2 0 195 90 3 845 1205 112 21 0 chr17 34146798 34146986 -61125665 - B2_Mm1a SINE B2 0 193 2 3 845 575 161 92 17 chr17 34147010 34147130 -61125521 - ID_B1 SINE B4 -2 222 94 3 845 237 345 0 22 chr17 34147156 34147248 -61125403 + C-rich Low_complexity Low_complexity 1 90 0 3 845 263 313 16 73 chr17 34147536 34147660 -61124991 + RMER4B LTR ERVK 18 134 -451 3 845 981 244 129 14 chr17 34148381 34148668 -61123983 - MTE2b LTR MaLR -2 377 58 3 845 626 207 37 0 chr17 34148673 34148808 -61123843 - B1_Mur2 SINE Alu -9 140 1 3 845 285 277 132 47 chr17 34148869 34148975 -61123676 - ID_B1 SINE B4 -23 201 87 3 845 439 186 126 10 chr17 34149602 34149705 -61122946 + B1_Mur2 SINE Alu 35 149 0 3 845 1062 55 14 20 chr17 34149705 34149853 -61122798 + B1_Mm SINE Alu 1 147 0 3 845 1045 123 59 38 chr17 34149878 34150064 -61122587 + B2_Mm2 SINE B2 1 190 -5 3 845 1963 85 9 123 chr17 34150629 34150978 -61121673 - RLTR10E LTR ERVK 0 311 3 3 845 20186 75 5 4 chr17 34150980 34154009 -61118642 - MMERVK10C-int LTR ERVK 0 7680 4621 3 845 765 117 31 0 chr17 34154792 34154920 -61117731 - MMERVK10C-int LTR ERVK -2920 4661 4530 3 845 883 173 35 31 chr17 34154893 34155196 -61117455 - MMERVK10C-int LTR ERVK -3126 4280 4137 3 845 824 138 98 0 chr17 34155187 34155208 -61117443 - MMERVK10C-int LTR ERVK -3643 3763 3743 3 845 243 0 0 0 chr17 34155208 34155235 -61117416 + (CATG)n Simple_repeat Simple_repeat 2 28 0 3 845 824 138 98 0 chr17 34155235 34155387 -61117264 - MMERVK10C-int LTR ERVK -3664 3742 3574 3 845 1584 153 151 28 chr17 34155432 34155796 -61116855 - RMER16-int LTR ERVK -4747 659 251 3 845 4061 130 16 106 chr17 34155933 34156733 -61115918 - MMERVK10C-int LTR ERVK -6629 952 225 3 845 257 222 0 0 chr17 34156733 34156778 -61115873 - RLTR27 LTR ERVK -34 275 231 3 845 728 69 10 10 chr17 34156778 34156881 -61115770 - MMERVK10C-int LTR ERVK -7478 103 1 3 845 2210 100 7 0 chr17 34156881 34157190 -61115461 - RLTR10E LTR ERVK 0 311 1 3 845 365 274 84 23 chr17 34157218 34157349 -61115302 - B1F2 SINE Alu -3 146 8 3 845 1413 60 49 0 chr17 34157514 34157699 -61114952 - B2_Mm2 SINE B2 0 195 2 3 845 979 196 29 5 chr17 34157784 34157994 -61114657 - B3 SINE B2 -1 215 1 3 845 230 281 36 24 chr17 34158430 34158514 -61114137 + GA-rich Low_complexity Low_complexity 4 88 0 3 845 750 235 73 21 chr17 34158974 34159165 -61113486 - ID_B1 SINE B4 -22 202 2 3 845 503 186 98 63 chr17 34160672 34160815 -61111836 - B1_Mur1 SINE Alu 0 149 2 3 845 200 304 0 0 chr17 34161533 34161589 -61111062 + (CCG)n Simple_repeat Simple_repeat 2 57 0 3 845 218 255 0 0 chr17 34162464 34162511 -61110140 + C-rich Low_complexity Low_complexity 3 49 0 3 845 246 62 0 0 chr17 34164526 34164558 -61108093 + (GCGTG)n Simple_repeat Simple_repeat 2 33 0 3 845 246 270 27 0 chr17 34166085 34166159 -61106492 + B4A SINE B4 1 76 -216 3 845 190 102 0 75 chr17 34169044 34169097 -61103554 + (CGG)n Simple_repeat Simple_repeat 1 49 0 3 845 27 62 0 0 chr17 34169181 34169229 -61103422 + GC_rich Low_complexity Low_complexity 1 48 0 3 845 25 0 0 0 chr17 34169274 34169299 -61103352 + GC_rich Low_complexity Low_complexity 1 25 0 3 845 207 0 0 0 chr17 34171335 34171358 -61101293 + (TCTCTG)n Simple_repeat Simple_repeat 4 26 0 3 845 952 33 0 0 chr17 34171800 34171921 -61100730 - B1_Mus1 SINE Alu -27 121 1 3 845 1037 82 43 12 chr17 34171933 34172094 -61100557 - B2_Mm2 SINE B2 0 195 30 3 845 461 173 73 27 chr17 34172079 34172299 -61100352 - RMER17A2 LTR ERVK -385 521 292 3 845 308 24 24 0 chr17 34172291 34172333 -61100318 - B2_Mm2 SINE B2 -151 44 2 3 845 817 211 0 7 chr17 34172911 34173054 -61099597 + B1F2 SINE Alu 1 142 -7 3 845 492 95 0 0 chr17 34177406 34177490 -61095161 + (TG)n Simple_repeat Simple_repeat 2 85 0 3 845 221 250 0 0 chr17 34178681 34178725 -61093926 + polypurine Low_complexity Low_complexity 1 44 0 3 845 276 325 0 0 chr17 34179767 34179844 -61092807 + MIRc SINE MIR 96 172 -96 3 845 1026 186 11 11 chr17 34179876 34180061 -61092590 - B3 SINE B2 -30 186 2 3 845 286 285 15 23 chr17 34180835 34180968 -61091683 + (TCCA)n Simple_repeat Simple_repeat 1 132 0 3 845 208 281 76 109 chr17 34181269 34181361 -61091290 + MIR3 SINE MIR 15 103 -105 3 845 189 0 0 0 chr17 34185431 34185452 -61087199 + (CTG)n Simple_repeat Simple_repeat 3 23 0 3 845 921 224 16 21 chr17 34185967 34186154 -61086497 - B3 SINE B2 -30 186 1 3 845 211 335 0 55 chr17 34191323 34191506 -61081145 + C-rich Low_complexity Low_complexity 1 173 0 3 845 224 336 14 20 chr17 34191442 34191588 -61081063 + CT-rich Low_complexity Low_complexity 5 149 0 3 845 286 176 67 13 chr17 34193586 34193661 -61078990 + ID SINE ID 2 80 -144 3 845 349 284 20 136 chr17 34193669 34193816 -61078835 + ID_B1 SINE B4 50 179 -45 3 845 266 117 33 0 chr17 34194737 34194797 -61077854 + (TCTCTG)n Simple_repeat Simple_repeat 1 62 0 3 845 431 323 0 0 chr17 34198949 34199073 -61073578 + (TG)n Simple_repeat Simple_repeat 1 124 0 3 845 33 0 0 0 chr17 34203059 34203092 -61069559 + AT_rich Low_complexity Low_complexity 1 33 0 3 845 277 279 55 55 chr17 34203497 34203607 -61069044 - MamRep38 DNA hAT -141 154 45 3 845 248 288 99 37 chr17 34204736 34204927 -61067724 + MTC-int LTR MaLR 597 799 -459 3 845 480 148 19 47 chr17 34205556 34205662 -61066989 + PB1D9 SINE Alu 9 111 -9 3 845 336 102 0 0 chr17 34206407 34206456 -61066195 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 845 189 211 0 0 chr17 34206457 34206509 -61066142 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 845 524 220 118 22 chr17 34206879 34207014 -61065637 + B1F SINE Alu 1 148 -1 3 845 736 163 19 45 chr17 34207523 34207677 -61064974 + RMER15 LTR ERVL 22 171 -404 3 845 611 277 80 76 chr17 34207695 34207945 -61064706 + RMER15 LTR ERVL 325 575 0 3 845 730 181 69 7 chr17 34208371 34208516 -61064135 - RMER16 LTR ERVK 0 533 380 3 845 339 85 0 0 chr17 34208753 34208800 -61063851 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 845 602 279 52 6 chr17 34208829 34209002 -61063649 - B3A SINE B2 -17 181 1 3 845 1077 263 44 58 chr17 34209048 34209391 -61063260 - ORR1E LTR MaLR 0 359 22 3 845 21 0 0 0 chr17 34209729 34209750 -61062901 + AT_rich Low_complexity Low_complexity 1 21 0 3 846 369 0 0 0 chr17 34210010 34210051 -61062600 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 3 846 265 265 152 10 chr17 34210607 34210706 -61061945 - PB1D10 SINE Alu 0 117 5 3 846 728 161 0 0 chr17 34211638 34211756 -61060895 + B1_Mur2 SINE Alu 12 129 -20 3 846 368 263 0 136 chr17 34211756 34211770 -61060881 + MT2B LTR ERVL 176 289 -312 3 846 22 35 0 0 chr17 34211821 34211850 -61060801 + AT_rich Low_complexity Low_complexity 1 29 0 3 846 1176 14 0 76 chr17 34211851 34212009 -61060642 + B1_Mm SINE Alu 2 147 0 3 846 1148 153 101 15 chr17 34212047 34212246 -61060405 - B3 SINE B2 0 216 1 3 846 392 96 11 46 chr17 34212520 34212607 -61060044 + GA-rich Low_complexity Low_complexity 1 84 0 3 846 395 224 113 60 chr17 34212822 34212955 -61059696 + B3 SINE B2 2 141 -75 3 846 27 0 0 0 chr17 34213200 34213227 -61059424 + GC_rich Low_complexity Low_complexity 1 27 0 3 846 385 254 50 17 chr17 34213409 34213529 -61059122 + CT-rich Low_complexity Low_complexity 4 127 0 3 846 260 240 317 0 chr17 34213607 34213711 -61058940 + B3 SINE B2 1 137 -79 3 846 1100 221 5 0 chr17 34214077 34214281 -61058370 + B3 SINE B2 5 209 -7 3 846 301 297 7 0 chr17 34214324 34214412 -61058239 + B1F2 SINE Alu 15 107 -43 3 846 279 215 15 0 chr17 34214882 34214947 -61057704 + B1F SINE Alu 33 98 -51 3 846 1252 41 0 0 chr17 34214974 34215120 -61057531 + B1_Mus2 SINE Alu 2 147 0 3 846 180 0 0 0 chr17 34216342 34216362 -61056289 + (A)n Simple_repeat Simple_repeat 1 20 0 3 846 639 177 94 25 chr17 34216892 34217065 -61055586 + B3 SINE B2 30 216 0 3 846 259 217 159 0 chr17 34217635 34217704 -61054947 + PB1D10 SINE Alu 1 80 -37 3 846 226 310 138 26 chr17 34217640 34217756 -61054895 + ID_B1 SINE B4 87 215 -9 3 846 497 253 72 30 chr17 34217768 34217935 -61054716 - MTD LTR MaLR -5 374 201 3 846 547 197 0 49 chr17 34217934 34218057 -61054594 + B1F2 SINE Alu 33 149 0 3 846 297 0 0 0 chr17 34218149 34218182 -61054469 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 846 646 278 0 8 chr17 34218185 34218319 -61054332 - B1_Mur1 SINE Alu -14 135 3 3 846 499 271 65 18 chr17 34218331 34218500 -61054151 - MTD LTR MaLR -242 177 1 3 846 1322 281 162 16 chr17 34218502 34219061 -61053590 - MTD-int LTR MaLR -3 1577 977 3 846 687 157 8 0 chr17 34219066 34219187 -61053464 - B1_Mur1 SINE Alu 0 149 28 3 846 278 243 40 26 chr17 34219190 34219266 -61053385 - MTD LTR MaLR -342 77 1 3 846 938 114 0 63 chr17 34219267 34219426 -61053225 + B1_Mur4 SINE Alu 1 149 -1 3 846 197 108 27 0 chr17 34219427 34219464 -61053187 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 3 846 369 0 0 0 chr17 34219680 34219721 -61052930 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 846 252 313 0 0 chr17 34219727 34219794 -61052857 - ID4_ SINE ID -16 67 1 3 846 496 223 9 19 chr17 34220013 34220118 -61052533 - PB1D10 SINE Alu -11 106 3 3 846 498 191 184 0 chr17 34220310 34220446 -61052205 - MTD LTR MaLR -13 406 246 3 846 234 0 0 0 chr17 34220448 34220474 -61052177 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 846 25 0 0 0 chr17 34220856 34220881 -61051770 + AT_rich Low_complexity Low_complexity 1 25 0 4 846 219 336 8 74 chr17 34221047 34221169 -61051482 + L2 LINE L2 479 592 -2827 4 846 336 209 307 13 chr17 34221150 34221300 -61051351 + MIR SINE MIR 59 252 -10 4 846 1121 48 7 46 chr17 34222171 34222323 -61050328 - B1_Mus2 SINE Alu -1 146 1 4 846 233 259 51 17 chr17 34224010 34224069 -61048582 - L1M3c LINE L1 -6077 64 4 4 846 1954 141 46 157 chr17 34224168 34224607 -61048044 - ORR1B1 LTR MaLR 0 394 5 4 846 198 150 0 0 chr17 34224712 34224752 -61047899 + (CCCCCA)n Simple_repeat Simple_repeat 5 44 0 4 846 189 0 0 0 chr17 34224842 34224863 -61047788 + (TCCTG)n Simple_repeat Simple_repeat 4 24 0 4 846 490 260 0 115 chr17 34224885 34224947 -61047704 - B1_Mur1 SINE Alu 0 149 96 4 846 858 35 0 9 chr17 34224947 34225063 -61047588 - L1Md_T LINE L1 0 6582 6468 4 846 490 260 0 115 chr17 34225063 34225165 -61047486 - B1_Mur1 SINE Alu -54 95 4 4 846 331 176 200 0 chr17 34225629 34225714 -61046937 - B1_Mur2 SINE Alu -27 122 21 4 846 1054 93 7 21 chr17 34226253 34226395 -61046256 - B1_Mur3 SINE Alu -9 140 1 4 846 628 227 202 34 chr17 34226757 34226935 -61045716 + B3 SINE B2 1 208 -8 4 846 593 190 10 93 chr17 34226941 34226952 -61045699 + ID_B1 SINE B4 81 115 -177 4 846 1008 47 0 0 chr17 34226952 34227081 -61045570 + B1_Mm SINE Alu 10 138 -9 4 846 593 190 10 93 chr17 34227081 34227117 -61045534 + ID_B1 SINE B4 116 246 -46 4 846 915 153 7 7 chr17 34227141 34227286 -61045365 + B1_Mur4 SINE Alu 5 149 -1 4 846 727 200 229 0 chr17 34227467 34227637 -61045014 - B3 SINE B2 -6 210 2 4 846 407 273 23 0 chr17 34228007 34228135 -61044516 - B3A SINE B2 -65 133 3 4 846 978 208 13 42 chr17 34228142 34228378 -61044273 - B4A SINE B4 -63 229 1 4 846 792 145 8 0 chr17 34228543 34228674 -61043977 - B1_Mur4 SINE Alu 0 150 19 4 846 198 71 0 0 chr17 34229961 34229989 -61042662 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 4 846 843 62 0 0 chr17 34229992 34230104 -61042547 - B1_Mus1 SINE Alu -2 146 35 4 846 363 298 0 42 chr17 34230187 34230306 -61042345 - PB1D10 SINE Alu -3 114 1 4 846 493 195 99 25 chr17 34234065 34234186 -61038465 - B1_Mur2 SINE Alu -1 148 19 4 846 232 294 146 38 chr17 34234630 34234681 -61037970 - HAL1 LINE L1 -710 1797 1737 4 846 1165 55 0 20 chr17 34234681 34234830 -61037821 - B1_Mm SINE Alu 0 147 2 4 846 232 294 146 38 chr17 34234830 34234953 -61037698 - HAL1 LINE L1 -771 1736 1598 4 846 3848 83 50 81 chr17 34234953 34235484 -61037167 - MT2B2 LTR ERVL -1 583 71 4 846 1244 41 7 0 chr17 34235484 34235630 -61037021 - B1_Mus1 SINE Alu -1 147 1 4 846 3848 83 50 81 chr17 34235630 34235700 -61036951 - MT2B2 LTR ERVL -514 70 1 4 846 232 294 146 38 chr17 34235700 34235736 -61036915 - HAL1 LINE L1 -910 1597 1564 4 846 432 186 82 33 chr17 34236348 34236470 -61036181 - B1F SINE Alu -1 148 21 4 846 337 202 37 75 chr17 34236800 34236934 -61035717 + RLTR15 LTR ERVK 33 161 -198 4 846 473 280 81 14 chr17 34237032 34237242 -61035409 + RLTR15 LTR ERVK 133 356 -3 4 846 815 294 55 31 chr17 34238286 34238612 -61034039 - Lx8 LINE L1 -408 7065 6732 4 846 477 290 100 1 chr17 34238725 34238886 -61033765 + MTD LTR MaLR 211 387 -13 4 846 501 346 7 7 chr17 34238894 34239048 -61033603 - Lx8 LINE L1 -1109 6364 6211 4 846 207 0 0 0 chr17 34239102 34239125 -61033526 + (TTA)n Simple_repeat Simple_repeat 1 23 0 4 846 802 78 8 2 chr17 34239126 34239251 -61033400 - B1_Mur4 SINE Alu 0 150 24 4 846 664 285 7 0 chr17 34239378 34239529 -61033122 - B3 SINE B2 -64 152 1 4 846 386 359 93 12 chr17 34239533 34239705 -61032946 - B3A SINE B2 -3 195 10 4 846 624 253 0 0 chr17 34239733 34239879 -61032772 - B1_Mur1 SINE Alu -1 148 3 4 846 699 299 196 19 chr17 34239883 34240957 -61031694 - L1_Mur3 LINE L1 -2545 3332 2044 4 846 27 0 0 0 chr17 34240988 34241015 -61031636 + AT_rich Low_complexity Low_complexity 1 27 0 4 846 3503 18 5 5 chr17 34241034 34241430 -61031221 + MTA_Mm LTR MaLR 1 396 0 4 846 1042 284 33 60 chr17 34241494 34241794 -61030857 - Lx6 LINE L1 -165 7295 7004 4 846 506 280 135 53 chr17 34241789 34242242 -61030409 - L1_Mur3 LINE L1 -3808 2039 1550 4 846 1248 34 0 7 chr17 34242242 34242389 -61030262 + B1_Mm SINE Alu 2 147 0 4 846 506 284 104 122 chr17 34242389 34242506 -61030145 - L1_Mur3 LINE L1 -4305 1575 1460 4 846 347 115 0 32 chr17 34242960 34243023 -61029628 + (TCC)n Simple_repeat Simple_repeat 3 63 0 4 846 631 182 131 36 chr17 34243042 34243179 -61029472 - B1_Mur4 SINE Alu 0 150 1 4 846 362 226 107 50 chr17 34243515 34243636 -61029015 + RSINE1 SINE B4 2 129 -36 4 846 274 306 41 83 chr17 34244679 34244800 -61027851 + ID_B1 SINE B4 94 209 -15 4 846 1480 58 15 30 chr17 34245087 34245284 -61027367 + B2_Mm2 SINE B2 2 195 0 4 846 1512 37 26 11 chr17 34245699 34245859 -61026792 + B2_Mm1a SINE B2 1 160 -33 4 846 207 0 0 0 chr17 34245859 34245882 -61026769 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 4 846 1512 37 26 11 chr17 34245882 34245910 -61026741 + B2_Mm1a SINE B2 161 192 -1 4 846 264 324 106 101 chr17 34246800 34247027 -61025624 + MIRb SINE MIR 19 246 -22 4 846 716 101 227 0 chr17 34247551 34247670 -61024981 + B1_Mus1 SINE Alu 1 146 -2 4 846 1044 95 112 6 chr17 34247973 34248143 -61024508 - B2_Mm2 SINE B2 -7 188 1 4 846 618 112 259 0 chr17 34248161 34248277 -61024374 - B1_Mm SINE Alu 0 147 2 4 846 249 119 0 0 chr17 34250936 34250978 -61021673 + (TCC)n Simple_repeat Simple_repeat 2 43 0 4 846 288 0 0 0 chr17 34253282 34253314 -61019337 + (A)n Simple_repeat Simple_repeat 1 32 0 4 846 252 208 12 132 chr17 34254234 34254252 -61018399 + MT2B LTR ERVL 150 157 -444 4 846 451 158 4 21 chr17 34254252 34254355 -61018296 + B1_Mus1 SINE Alu 2 99 -50 4 846 365 260 57 9 chr17 34261129 34261234 -61011417 - MER3 DNA MER1_type -34 175 66 4 846 207 0 0 0 chr17 34261322 34261345 -61011306 + (T)n Simple_repeat Simple_repeat 1 23 0 4 846 1328 7 0 0 chr17 34261345 34261491 -61011160 - B1_Mm SINE Alu 0 147 2 4 846 1205 54 7 0 chr17 34261544 34261691 -61010960 - B1_Mus1 SINE Alu 0 148 1 4 846 376 205 66 33 chr17 34262129 34262220 -61010431 - MIRb SINE MIR -132 136 43 4 846 258 32 0 0 chr17 34262413 34262444 -61010207 + (T)n Simple_repeat Simple_repeat 1 31 0 4 846 1167 48 0 33 chr17 34262444 34262596 -61010055 - B1_Mm SINE Alu 0 147 1 4 846 299 235 15 0 chr17 34262596 34262664 -61009987 + ID_B1 SINE B4 93 161 -63 4 846 253 317 57 9 chr17 34262664 34262701 -61009950 + B1F1 SINE Alu 12 121 -28 4 846 1210 48 7 0 chr17 34263129 34263275 -61009376 - B1_Mus1 SINE Alu 0 148 2 4 846 460 200 53 0 chr17 34263564 34263659 -61008992 - PB1D10 SINE Alu -8 109 10 4 846 272 246 16 0 chr17 34263607 34263668 -61008983 - B4A SINE B4 -146 146 85 4 846 580 215 96 0 chr17 34264007 34264142 -61008509 + B1F SINE Alu 1 148 -1 4 846 469 233 85 36 chr17 34264785 34264950 -61007701 + MER58B DNA MER1_type 7 179 -162 4 846 948 106 191 43 chr17 34265382 34265570 -61007081 + B3 SINE B2 1 216 0 4 846 288 0 0 0 chr17 34266206 34266238 -61006413 + (CTG)n Simple_repeat Simple_repeat 3 34 0 4 846 274 304 48 104 chr17 34266425 34266550 -61006101 + B1F SINE Alu 20 137 -12 4 846 241 210 31 0 chr17 34266807 34266861 -61005790 - ID4 SINE ID -92 60 3 4 846 279 0 0 0 chr17 34266865 34266896 -61005755 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4 846 238 311 18 62 chr17 34266904 34266936 -61005715 - PB1D10 SINE Alu -8 109 81 4 846 4181 130 127 12 chr17 34266936 34267596 -61005055 - RMER19A LTR ERVK 0 737 2 4 846 238 311 18 62 chr17 34267596 34267676 -61004975 - PB1D10 SINE Alu -37 80 2 4 846 394 265 87 20 chr17 34267848 34267878 -61004773 + B4 SINE B4 69 182 -110 4 846 596 147 100 9 chr17 34267878 34267988 -61004663 + B1_Mur1 SINE Alu 22 141 -8 4 846 260 53 26 0 chr17 34268049 34268087 -61004564 + (TCC)n Simple_repeat Simple_repeat 1 39 0 4 846 211 200 120 0 chr17 34268112 34268162 -61004489 - ID4_ SINE ID -19 64 9 4 846 1063 300 92 0 chr17 34268428 34268765 -61003886 - MTEa LTR MaLR -11 368 1 4 846 292 243 40 0 chr17 34268839 34268913 -61003738 - ID4 SINE ID -6 77 1 4 846 249 33 0 0 chr17 34269154 34269184 -61003467 + (GGGAGA)n Simple_repeat Simple_repeat 3 32 0 4 846 306 284 43 8 chr17 34269205 34269322 -61003329 - ORR1E LTR MaLR -221 138 18 4 846 892 176 16 16 chr17 34269340 34269525 -61003126 - B2_Mm2 SINE B2 0 195 11 4 846 186 103 0 0 chr17 34269636 34269665 -61002986 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 846 1229 41 7 0 chr17 34269713 34269858 -61002793 + B1_Mm SINE Alu 1 146 -1 4 846 814 265 20 20 chr17 34270054 34270254 -61002397 - B3 SINE B2 -15 201 2 4 846 465 297 151 7 chr17 34270605 34270762 -61001889 + MTEa LTR MaLR 8 178 -201 4 846 278 310 32 96 chr17 34271003 34271128 -61001523 + RSINE1 SINE B4 2 118 -47 4 846 180 0 0 0 chr17 34271131 34271151 -61001500 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 846 245 27 54 0 chr17 34271153 34271190 -61001461 + (CAGAGA)n Simple_repeat Simple_repeat 2 40 0 4 846 624 87 0 52 chr17 34271200 34271297 -61001354 - B3 SINE B2 -124 92 1 4 846 865 300 71 10 chr17 34271300 34271610 -61001041 - Tigger7 DNA MER2_type -2055 436 108 4 846 413 235 108 0 chr17 34271616 34271718 -61000933 + PB1 SINE Alu 3 115 -12 4 846 446 286 8 23 chr17 34271727 34271758 -61000893 + ID SINE ID 50 78 -146 4 846 447 273 0 0 chr17 34271758 34271868 -61000783 + PB1D9 SINE Alu 1 110 -10 4 846 681 223 7 0 chr17 34271874 34272013 -61000638 + ID_B1 SINE B4 47 186 -38 4 846 237 321 37 0 chr17 34272087 34272168 -61000483 - Tigger7 DNA MER2_type -2386 105 22 4 846 248 359 0 0 chr17 34272900 34272992 -60999659 - MIRm SINE MIR -126 150 59 5 846 494 224 19 0 chr17 34273011 34273118 -60999533 + PB1D10 SINE Alu 1 109 -8 5 846 379 305 94 0 chr17 34273735 34273863 -60998788 - ID_B1 SINE B4 -6 218 79 5 846 248 318 36 18 chr17 34276923 34277035 -60995616 + MIR SINE MIR 67 180 -82 5 846 326 250 152 9 chr17 34277199 34277304 -60995347 - B4 SINE B4 -172 120 1 5 846 180 0 0 0 chr17 34277484 34277504 -60995147 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 5 846 980 256 5 9 chr17 34277504 34277713 -60994938 - B3 SINE B2 -7 209 2 5 846 605 231 8 17 chr17 34277887 34278006 -60994645 - B1_Mur1 SINE Alu -14 135 18 5 846 331 230 18 83 chr17 34278123 34278232 -60994419 - ID_B1 SINE B4 -31 193 92 5 846 272 241 90 22 chr17 34278224 34278313 -60994338 - AmnSINE1 SINE SINE -452 123 29 5 846 363 259 35 0 chr17 34278245 34278330 -60994321 - 5S rRNA rRNA -20 101 14 5 846 521 191 0 0 chr17 34278393 34278482 -60994169 - ID_B1 SINE B4 -4 220 132 5 846 198 71 0 0 chr17 34278752 34278780 -60993871 + (TC)n Simple_repeat Simple_repeat 1 28 0 5 846 333 68 0 0 chr17 34278781 34278825 -60993826 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 846 261 57 0 0 chr17 34278825 34278859 -60993792 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 846 528 250 0 17 chr17 34279251 34279369 -60993282 + PB1D10 SINE Alu 2 117 0 5 846 207 0 0 0 chr17 34279907 34279930 -60992721 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 846 261 0 0 0 chr17 34280013 34280042 -60992609 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 846 495 0 0 0 chr17 34280629 34280684 -60991967 + (GA)n Simple_repeat Simple_repeat 1 55 0 5 846 313 191 11 22 chr17 34280734 34280825 -60991826 + (TATG)n Simple_repeat Simple_repeat 1 90 0 5 846 778 241 79 177 chr17 34280974 34281291 -60991360 + B4 SINE B4 3 288 -4 5 846 222 128 0 0 chr17 34281886 34281925 -60990726 + (T)n Simple_repeat Simple_repeat 1 39 0 5 846 272 102 20 0 chr17 34282780 34282829 -60989822 + (TCTG)n Simple_repeat Simple_repeat 4 53 0 5 846 458 136 133 22 chr17 34282839 34282929 -60989722 - PB1D7 SINE Alu -9 111 12 5 846 418 162 13 13 chr17 34283303 34283378 -60989273 + B3 SINE B2 6 80 -136 5 846 368 283 121 21 chr17 34283521 34283662 -60988989 - HAL1-3A_ME LINE L1 -729 2129 1975 5 846 307 309 126 30 chr17 34283689 34283856 -60988795 - B3A SINE B2 -15 183 1 5 846 404 350 105 71 chr17 34283965 34284069 -60988582 - MER21B LTR ERV1 -511 352 263 5 846 1212 54 0 0 chr17 34284069 34284216 -60988435 - B1_Mus2 SINE Alu 0 147 1 5 846 404 350 105 71 chr17 34284216 34284434 -60988217 - MER21B LTR ERV1 -601 262 19 5 846 251 200 20 0 chr17 34285173 34285223 -60987428 - B4A SINE B4 -218 74 24 5 846 226 333 16 0 chr17 34285223 34285236 -60987415 - tRNA-Ala-GCG tRNA tRNA -9 66 3 5 846 238 320 57 19 chr17 34285257 34285362 -60987289 - PB1D10 SINE Alu -8 109 1 5 846 2513 172 5 14 chr17 34286469 34286894 -60985757 - MTC LTR MaLR 0 421 1 5 846 1290 41 0 0 chr17 34288176 34288323 -60984328 - B1_Mm SINE Alu 0 147 1 5 846 403 225 14 0 chr17 34288728 34288866 -60983785 + (TG)n Simple_repeat Simple_repeat 1 140 0 5 846 414 218 13 0 chr17 34288984 34289062 -60983589 + B4A SINE B4 8 86 -206 5 846 233 341 0 36 chr17 34289062 34289124 -60983527 + BC1_Mm scRNA scRNA 8 142 -10 5 846 545 273 19 55 chr17 34289086 34289267 -60983384 + B4 SINE B4 69 235 -57 5 846 288 77 0 0 chr17 34290775 34290814 -60981837 + (TCTG)n Simple_repeat Simple_repeat 4 42 0 5 846 408 191 157 0 chr17 34290814 34290910 -60981741 - PB1D7 SINE Alu -2 125 9 5 846 430 187 0 0 chr17 34291297 34291372 -60981279 + B3 SINE B2 6 80 -136 5 846 402 127 0 0 chr17 34291555 34291626 -60981025 + (TC)n Simple_repeat Simple_repeat 2 72 0 5 846 474 300 64 64 chr17 34291637 34291840 -60980811 - B3 SINE B2 -13 203 1 5 846 234 378 54 66 chr17 34291861 34292028 -60980623 - MER21B LTR ERV1 -428 435 271 5 846 279 277 94 21 chr17 34292124 34292220 -60980431 - MER21B LTR ERV1 -742 121 19 5 846 341 231 2 85 chr17 34292930 34293036 -60979615 - ID4_ SINE ID -53 99 2 5 846 293 301 29 19 chr17 34293050 34293155 -60979496 - PB1D10 SINE Alu -8 109 4 5 846 245 254 0 83 chr17 34293385 34293445 -60979206 + MER5A DNA MER1_type 38 92 -97 5 846 1379 90 0 41 chr17 34293484 34293681 -60978970 - B2_Mm2 SINE B2 -5 190 2 5 846 386 256 145 0 chr17 34293826 34293943 -60978708 + ID_B1 SINE B4 85 218 -6 5 846 1020 79 0 0 chr17 34294835 34294974 -60977677 + (GGAGAA)n Simple_repeat Simple_repeat 5 143 0 5 846 2573 162 5 14 chr17 34295311 34295736 -60976915 - MTC LTR MaLR 0 421 1 5 846 563 289 34 0 chr17 34297481 34297630 -60975021 - RSINE1 SINE B4 -10 155 2 5 846 285 185 61 15 chr17 34298143 34298209 -60974442 + B3 SINE B2 3 71 -145 5 846 456 158 0 0 chr17 34298730 34298806 -60973845 - B3 SINE B2 -137 79 4 5 846 1523 180 92 27 chr17 34298905 34299276 -60973375 - RMER10B LTR ERVL -3 395 1 5 846 1162 103 54 0 chr17 34299481 34299665 -60972986 - B2_Mm2 SINE B2 -1 194 1 5 846 231 159 0 22 chr17 34300077 34300122 -60972529 + B3 SINE B2 6 49 -167 5 846 651 151 0 0 chr17 34300122 34300281 -60972370 + (CA)n Simple_repeat Simple_repeat 1 159 0 5 846 254 101 58 0 chr17 34300337 34300406 -60972245 + T-rich Low_complexity Low_complexity 1 73 0 5 846 1252 41 0 0 chr17 34300406 34300551 -60972100 - B1_Mus1 SINE Alu 0 148 4 5 846 445 276 38 61 chr17 34300551 34300567 -60972084 + B4 SINE B4 77 89 -203 5 846 820 180 0 0 chr17 34300567 34300695 -60971956 + B1_Mur3 SINE Alu 1 128 -21 5 846 1597 38 5 0 chr17 34300728 34300913 -60971738 + B2_Mm1a SINE B2 2 187 -6 5 846 1031 179 75 0 chr17 34300915 34301116 -60971535 - B3 SINE B2 0 216 1 5 846 417 192 274 46 chr17 34301159 34301213 -60971438 - B3 SINE B2 -1 215 161 5 846 324 0 0 0 chr17 34301213 34301249 -60971402 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 846 417 192 274 46 chr17 34301249 34301369 -60971282 - B3 SINE B2 -56 160 1 5 846 395 270 166 43 chr17 34301421 34301681 -60970970 - B4A SINE B4 0 292 1 5 846 26 50 0 0 chr17 34301839 34301879 -60970772 + AT_rich Low_complexity Low_complexity 1 40 0 5 846 477 0 0 0 chr17 34301905 34301958 -60970693 + (TC)n Simple_repeat Simple_repeat 2 54 0 5 846 1031 267 106 29 chr17 34302032 34302344 -60970307 - ORR1E LTR MaLR 0 359 24 5 846 1218 129 48 19 chr17 34302422 34302628 -60970023 - B3 SINE B2 -4 212 1 5 846 508 188 31 10 chr17 34302635 34302732 -60969919 - ID_B1 SINE B4 -6 218 120 5 846 2585 46 64 3 chr17 34303686 34304012 -60968639 - ORR1A1 LTR MaLR 0 346 1 5 846 1567 32 27 0 chr17 34304420 34304607 -60968044 + B2_Mm1t SINE B2 2 193 0 5 846 468 304 19 12 chr17 34304620 34304780 -60967871 + RSINE1 SINE B4 4 164 -1 5 846 740 149 16 0 chr17 34304888 34305009 -60967642 + B1_Mur2 SINE Alu 10 132 -17 5 846 307 204 0 0 chr17 34305075 34305129 -60967522 - ID SINE ID -153 71 18 5 846 350 252 275 8 chr17 34305517 34305637 -60967014 + RSINE1 SINE B4 1 152 -13 5 846 555 56 0 0 chr17 34305847 34305918 -60966733 + (CA)n Simple_repeat Simple_repeat 2 72 0 5 846 192 143 0 0 chr17 34305918 34305960 -60966691 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 846 551 148 35 6 chr17 34305983 34306153 -60966498 + (CAGA)n Simple_repeat Simple_repeat 4 178 0 5 846 267 177 56 12 chr17 34306177 34306337 -60966314 + (CAGAGA)n Simple_repeat Simple_repeat 6 172 0 5 846 300 333 39 13 chr17 34306591 34306746 -60965905 + RMER5 LTR ERV1 30 188 -346 5 846 1050 211 96 83 chr17 34306752 34307134 -60965517 - MTE2a LTR MaLR -14 405 11 5 846 800 284 98 53 chr17 34307142 34307480 -60965171 + RMER5 LTR ERV1 174 526 -8 5 846 1525 212 141 5 chr17 34308068 34308437 -60964214 + MTD LTR MaLR 1 419 0 5 846 617 176 244 34 chr17 34308615 34308728 -60963923 + B3 SINE B2 1 148 -68 5 846 315 0 0 0 chr17 34308728 34308763 -60963888 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 846 498 17 0 0 chr17 34308763 34308821 -60963830 + (GA)n Simple_repeat Simple_repeat 2 60 0 5 846 617 176 244 34 chr17 34308821 34308882 -60963769 + B3 SINE B2 149 212 -4 5 846 923 170 0 0 chr17 34308934 34309069 -60963582 - B1_Mus2 SINE Alu -11 136 2 5 846 349 312 13 0 chr17 34309070 34309147 -60963504 - PB1D10 SINE Alu -34 83 6 5 846 1380 201 111 48 chr17 34309199 34309550 -60963101 - ORR1D1 LTR MaLR -1 373 1 5 846 813 239 5 62 chr17 34309606 34309716 -60962935 - B3A SINE B2 0 198 90 5 846 3924 95 20 11 chr17 34309716 34310268 -60962383 - RLTR31B_Mm LTR ERVK 0 557 1 5 846 813 239 5 62 chr17 34310268 34310367 -60962284 - B3A SINE B2 -109 89 2 5 846 192 77 0 0 chr17 34310394 34310420 -60962231 + (TCCC)n Simple_repeat Simple_repeat 4 29 0 5 846 370 214 62 9 chr17 34310477 34310590 -60962061 - PB1D7 SINE Alu -1 119 1 5 846 360 338 90 60 chr17 34310591 34310925 -60961726 - L1M5 LINE L1 -1645 4501 4158 5 846 3031 138 66 6 chr17 34311776 34312204 -60960447 + RLTR20C LTR ERVK 2 445 -89 5 846 615 14 0 0 chr17 34312204 34312276 -60960375 + (TG)n Simple_repeat Simple_repeat 2 73 0 5 846 3031 138 66 6 chr17 34312276 34312350 -60960301 + RLTR20C LTR ERVK 446 534 0 5 846 325 298 67 112 chr17 34312645 34312913 -60959738 - ORR1E LTR MaLR -5 354 99 5 846 696 272 17 11 chr17 34313269 34313440 -60959211 + B3A SINE B2 4 182 -11 5 846 335 268 61 61 chr17 34313738 34313818 -60958833 + MLT2D LTR ERVL 1 81 -333 5 846 813 287 39 174 chr17 34313818 34314256 -60958395 + MTE2a LTR MaLR 1 379 0 5 846 335 268 61 61 chr17 34314256 34314322 -60958329 + MLT2D LTR ERVL 82 146 -268 5 846 414 165 176 0 chr17 34314299 34314390 -60958261 + B3 SINE B2 108 214 -2 6 846 337 337 0 29 chr17 34315014 34315118 -60957533 - B3A SINE B2 -71 127 27 6 846 1167 178 24 0 chr17 34315136 34315344 -60957307 - B3 SINE B2 0 216 4 6 846 826 196 7 20 chr17 34315362 34315513 -60957138 - B1_Mur1 SINE Alu 0 149 1 6 846 23 33 0 0 chr17 34315571 34315601 -60957050 + AT_rich Low_complexity Low_complexity 1 30 0 6 846 228 67 0 0 chr17 34315610 34315640 -60957011 + (TGG)n Simple_repeat Simple_repeat 3 32 0 6 846 611 259 31 12 chr17 34315640 34315800 -60956851 - RSINE1 SINE B4 0 165 3 6 846 1849 151 202 3 chr17 34315932 34316283 -60956368 + MTC LTR MaLR 1 421 0 6 846 274 247 12 12 chr17 34316386 34316468 -60956183 - PB1D10 SINE Alu 0 117 36 6 846 312 330 17 34 chr17 34317125 34317244 -60955407 - RSINE1 SINE B4 0 165 49 6 846 24 0 0 0 chr17 34317755 34317779 -60954872 + AT_rich Low_complexity Low_complexity 1 24 0 6 846 1017 273 64 0 chr17 34318228 34318492 -60954159 - B4A SINE B4 -8 284 4 6 846 823 182 124 10 chr17 34318521 34318715 -60953936 + B3 SINE B2 1 216 0 6 846 29 28 0 0 chr17 34318976 34319012 -60953639 + AT_rich Low_complexity Low_complexity 1 36 0 6 846 847 202 77 62 chr17 34319713 34319908 -60952743 + B3A SINE B2 1 198 0 6 846 762 207 14 14 chr17 34320294 34320441 -60952210 - B1_Mur1 SINE Alu 0 149 3 6 846 292 333 44 78 chr17 34320441 34320504 -60952147 - B4 SINE B4 -210 82 27 6 846 297 0 0 0 chr17 34321500 34321533 -60951118 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 846 914 236 81 10 chr17 34321538 34321735 -60950916 + ID_B1 SINE B4 7 217 -7 6 846 944 136 219 6 chr17 34321774 34321952 -60950699 - B3 SINE B2 0 216 1 6 846 1233 35 7 0 chr17 34322039 34322183 -60950468 + B1_Mus1 SINE Alu 4 148 0 6 846 209 195 0 24 chr17 34325587 34325608 -60947043 + polypyrimidine Low_complexity Low_complexity 23 43 0 6 846 1236 91 0 0 chr17 34325608 34325784 -60946867 + (TCCCC)n Simple_repeat Simple_repeat 1 176 0 6 846 209 195 0 24 chr17 34325784 34325804 -60946847 + polypyrimidine Low_complexity Low_complexity 3 22 0 6 846 695 236 14 0 chr17 34325808 34325948 -60946703 - B1_Mur2 SINE Alu -7 142 1 6 846 587 239 116 34 chr17 34326603 34326750 -60945901 + ID_B1 SINE B4 54 212 -12 6 846 244 263 18 0 chr17 34326753 34326810 -60945841 - ID SINE ID -164 60 3 6 846 231 209 67 34 chr17 34326890 34326979 -60945672 - MIR3 SINE MIR -4 204 113 6 846 580 188 137 0 chr17 34327187 34327304 -60945347 - B1F1 SINE Alu -15 134 2 6 846 839 244 32 16 chr17 34327905 34328092 -60944559 + B3A SINE B2 3 192 -6 6 846 234 292 79 35 chr17 34328829 34328945 -60943706 + MIRb SINE MIR 33 156 -112 6 846 529 209 38 0 chr17 34328945 34329050 -60943601 + PB1D7 SINE Alu 1 109 -11 6 846 692 222 19 56 chr17 34329062 34329224 -60943427 + RSINE1 SINE B4 2 157 -8 6 846 252 86 0 0 chr17 34329225 34329260 -60943391 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 846 533 254 75 118 chr17 34329374 34329525 -60943126 + B3A SINE B2 10 165 -33 6 846 381 22 0 0 chr17 34329525 34329571 -60943080 + (CAGA)n Simple_repeat Simple_repeat 1 46 0 6 846 368 254 75 118 chr17 34329571 34329606 -60943045 + B2_Mm2 SINE B2 155 188 -7 6 846 740 111 0 8 chr17 34330287 34330405 -60942246 + (TTC)n Simple_repeat Simple_repeat 2 118 0 6 846 339 184 0 0 chr17 34331158 34331245 -60941406 + (TG)n Simple_repeat Simple_repeat 2 88 0 6 846 257 246 0 0 chr17 34331261 34331318 -60941333 + (TATG)n Simple_repeat Simple_repeat 3 59 0 6 846 738 201 0 0 chr17 34331318 34331552 -60941099 + (TG)n Simple_repeat Simple_repeat 1 234 0 6 846 645 192 0 28 chr17 34331553 34331735 -60940916 + (TATG)n Simple_repeat Simple_repeat 1 177 0 6 846 483 259 26 0 chr17 34331946 34332062 -60940589 - B1F2 SINE Alu -1 148 30 6 846 422 318 59 21 chr17 34332315 34332458 -60940193 - MIRb SINE MIR -109 159 6 6 846 1184 153 71 0 chr17 34332481 34332677 -60939974 - B3 SINE B2 -6 210 1 6 846 769 166 22 103 chr17 34332721 34332912 -60939739 + B3 SINE B2 1 185 -8 6 846 397 256 90 36 chr17 34333122 34333288 -60939363 + Lx6 LINE L1 7260 7434 -26 6 846 194 297 32 42 chr17 34335981 34336076 -60936575 + L3 LINE CR1 877 970 -3519 6 846 208 150 25 0 chr17 34336436 34336476 -60936175 + G-rich Low_complexity Low_complexity 1 41 0 6 846 450 0 0 0 chr17 34336732 34336782 -60935869 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 846 1265 110 20 20 chr17 34337328 34337523 -60935128 - B2_Mm2 SINE B2 0 195 1 6 847 271 333 26 0 chr17 34341001 34341115 -60931536 + CT-rich Low_complexity Low_complexity 2 118 0 6 847 309 149 0 0 chr17 34341230 34341297 -60931354 + (T)n Simple_repeat Simple_repeat 1 67 0 6 847 180 77 0 0 chr17 34341995 34342021 -60930630 + (CCCCCA)n Simple_repeat Simple_repeat 2 27 0 6 847 210 150 0 0 chr17 34342025 34342065 -60930586 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 847 757 170 51 7 chr17 34343002 34343165 -60929486 - B2_Mm2 SINE B2 -12 204 3 6 847 438 239 71 27 chr17 34343607 34343719 -60928932 - RSINE1 SINE B4 -31 134 18 6 847 1386 142 111 41 chr17 34343773 34344088 -60928563 + Lx LINE L1 6316 6652 -2 6 847 303 230 0 0 chr17 34344090 34344142 -60928509 + A-rich Low_complexity Low_complexity 1 52 0 6 847 396 0 0 0 chr17 34344142 34344186 -60928465 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 6 847 1280 47 0 0 chr17 34344187 34344335 -60928316 + B1_Mus1 SINE Alu 1 148 0 6 847 303 230 0 0 chr17 34344335 34344367 -60928284 + A-rich Low_complexity Low_complexity 53 84 0 6 847 638 263 155 27 chr17 34344650 34344908 -60927743 + B4A SINE B4 2 292 0 6 847 209 250 13 0 chr17 34344913 34344989 -60927662 + (CA)n Simple_repeat Simple_repeat 2 78 0 6 847 369 0 0 0 chr17 34345080 34345121 -60927530 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 847 653 24 12 0 chr17 34345263 34345345 -60927306 - B1_Mus2 SINE Alu 0 147 65 6 847 211 203 13 13 chr17 34345610 34345685 -60926966 + C-rich Low_complexity Low_complexity 2 76 0 6 847 718 202 12 0 chr17 34346287 34346460 -60926191 + (TAGA)n Simple_repeat Simple_repeat 2 176 0 6 847 255 258 0 0 chr17 34346483 34346545 -60926106 - L1M3 LINE L1 -376 5798 5737 6 847 1255 137 54 0 chr17 34346731 34346935 -60925716 - B3 SINE B2 0 216 2 6 847 348 24 0 0 chr17 34346974 34347015 -60925636 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 847 330 185 117 66 chr17 34347081 34347270 -60925381 - L1M3 LINE L1 -659 5524 5357 6 847 312 154 0 0 chr17 34347939 34347991 -60924660 - L1M3 LINE L1 -1017 5123 5072 6 847 368 262 0 0 chr17 34348004 34348084 -60924567 + B3A SINE B2 1 80 -118 6 847 354 45 0 0 chr17 34348128 34348172 -60924479 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 847 246 148 0 18 chr17 34348186 34348241 -60924410 - L1M3 LINE L1 -1107 5039 4986 6 847 641 282 11 5 chr17 34348268 34348457 -60924194 - B3A SINE B2 -6 192 3 6 847 228 114 0 0 chr17 34348628 34348663 -60923988 - B4A SINE B4 -254 38 4 6 847 234 0 0 0 chr17 34348670 34348696 -60923955 + (TCCCC)n Simple_repeat Simple_repeat 1 26 0 6 847 221 249 80 0 chr17 34349455 34349675 -60922976 + (CCCTAA)n Simple_repeat Simple_repeat 1 237 0 6 847 368 264 82 23 chr17 34349707 34349878 -60922773 - L1MC5 LINE L1 -183 7778 7598 6 847 292 301 108 10 chr17 34350181 34350376 -60922275 - L1MC5 LINE L1 -739 7222 7009 6 847 274 243 60 78 chr17 34350648 34350764 -60921887 + PB1D10 SINE Alu 3 116 -1 6 847 333 243 14 0 chr17 34351795 34351869 -60920782 + B4 SINE B4 1 75 -217 6 847 195 42 0 0 chr17 34351898 34351922 -60920729 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 847 516 16 0 0 chr17 34351994 34352055 -60920596 + (CA)n Simple_repeat Simple_repeat 1 61 0 6 847 29 0 0 0 chr17 34353225 34353254 -60919397 + AT_rich Low_complexity Low_complexity 1 29 0 6 847 665 244 93 88 chr17 34353270 34353486 -60919165 + MTE2b LTR MaLR 1 217 -162 6 847 264 193 53 0 chr17 34353501 34353558 -60919093 + MTE2b LTR MaLR 262 321 -58 6 847 189 107 0 0 chr17 34353642 34353670 -60918981 + (TATG)n Simple_repeat Simple_repeat 2 29 0 6 847 793 156 104 0 chr17 34353675 34353810 -60918841 - B1_Mur4 SINE Alu 0 150 2 6 847 261 83 0 0 chr17 34353831 34353867 -60918784 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 847 218 250 54 81 chr17 34353867 34353941 -60918710 - RSINE1 SINE B4 0 165 94 6 847 210 302 16 16 chr17 34354095 34354159 -60918492 - MIRc SINE MIR -113 155 92 6 847 746 246 165 48 chr17 34354161 34354501 -60918150 - MTD LTR MaLR -14 405 47 6 847 297 0 0 0 chr17 34354503 34354536 -60918115 + (CAGA)n Simple_repeat Simple_repeat 1 33 0 6 847 1312 232 114 9 chr17 34354587 34354904 -60917747 - ORR1D2 LTR MaLR -18 352 3 6 847 923 239 14 19 chr17 34354964 34355177 -60917474 - B3 SINE B2 0 216 5 6 847 518 174 386 7 chr17 34356160 34356305 -60916346 + B3 SINE B2 1 200 -16 6 847 2894 39 0 3 chr17 34356305 34356643 -60916008 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 847 5868 73 87 106 chr17 34356643 34357698 -60914953 + IAPEz-int LTR ERVK 8 1042 -5439 6 847 26437 17 3 1 chr17 34357685 34360758 -60911893 + IAPEz-int LTR ERVK 3405 6481 0 6 847 2894 39 0 3 chr17 34360758 34361096 -60911555 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 847 647 225 0 0 chr17 34361126 34361237 -60911414 + RSINE1 SINE B4 23 133 -32 6 847 332 41 41 0 chr17 34361277 34361326 -60911325 + (TAAAA)n Simple_repeat Simple_repeat 5 55 0 6 847 361 188 0 0 chr17 34361439 34361503 -60911148 - B3 SINE B2 -152 64 1 6 847 21 36 0 0 chr17 34361804 34361832 -60910819 + AT_rich Low_complexity Low_complexity 1 28 0 6 847 510 266 61 27 chr17 34361834 34361981 -60910670 - RSINE1 SINE B4 -11 154 3 6 847 2281 53 46 0 chr17 34361987 34362289 -60910362 + MTB LTR MaLR 85 400 0 6 847 2578 133 37 20 chr17 34362292 34362699 -60909952 + RMER19A LTR ERVK 123 536 -201 7 847 2061 123 3 64 chr17 34362704 34363061 -60909590 + IAPLTR1a_Mm LTR ERVK 1 335 -2 7 847 55533 17 2 5 chr17 34363070 34369531 -60903120 + IAPEz-int LTR ERVK 35 6481 0 7 847 2057 125 3 64 chr17 34369531 34369890 -60902761 + IAPLTR1a_Mm LTR ERVK 1 337 0 7 847 1241 70 0 0 chr17 34369890 34370045 -60902606 + RMER19A LTR ERVK 582 736 -1 7 847 450 312 41 89 chr17 34370103 34370395 -60902256 - L1_Rod LINE L1 -384 5805 5528 7 847 288 170 0 54 chr17 34370425 34370481 -60902170 - ID_B1 SINE B4 0 224 172 7 847 438 157 0 57 chr17 34370431 34370519 -60902132 - PB1D9 SINE Alu -6 114 32 7 847 847 266 29 20 chr17 34370530 34370745 -60901906 - B3 SINE B2 0 195 2 7 847 25 0 0 0 chr17 34370817 34370842 -60901809 + AT_rich Low_complexity Low_complexity 1 25 0 7 847 305 309 103 48 chr17 34370846 34370992 -60901659 - RSINE1 SINE B4 -1 164 11 7 847 387 0 0 0 chr17 34371049 34371092 -60901559 + (CAA)n Simple_repeat Simple_repeat 3 45 0 7 847 247 257 66 72 chr17 34371380 34371535 -60901116 - L1_Rod LINE L1 -832 5311 5097 7 847 1337 85 0 22 chr17 34371535 34371715 -60900936 - B2_Mm2 SINE B2 -19 176 1 7 847 239 287 51 93 chr17 34371715 34371774 -60900877 - L1_Rod LINE L1 -979 5164 5106 7 847 548 184 25 58 chr17 34372148 34372268 -60900383 + MTD LTR MaLR 95 210 -209 7 847 1079 101 0 0 chr17 34372268 34372416 -60900235 + B2_Mm2 SINE B2 2 149 -46 7 847 423 81 27 2 chr17 34372431 34372541 -60900110 + B2_Mm2 SINE B2 47 195 0 7 847 994 205 65 5 chr17 34372534 34372735 -60899916 + MTD LTR MaLR 193 405 -14 7 847 272 288 41 41 chr17 34372892 34373015 -60899636 + RLTR42-int LTR ERVK 1264 1386 -4136 7 847 4351 159 91 49 chr17 34373252 34374103 -60898548 + RMER19B LTR ERVK 1 886 -16 7 847 1267 82 21 32 chr17 34374104 34374293 -60898358 + B2_Mm2 SINE B2 1 187 -8 7 847 432 55 0 0 chr17 34374616 34374671 -60897980 + (TG)n Simple_repeat Simple_repeat 1 55 0 7 847 1773 165 82 87 chr17 34374673 34375077 -60897574 + MTD LTR MaLR 18 419 0 7 847 489 34 0 0 chr17 34375139 34375198 -60897453 + (TTA)n Simple_repeat Simple_repeat 2 60 0 7 847 245 154 0 0 chr17 34375198 34375237 -60897414 - PB1D7 SINE Alu -10 110 72 7 847 1117 101 0 13 chr17 34376129 34376279 -60896372 + B1_Mus1 SINE Alu 1 148 0 7 847 213 132 0 0 chr17 34376393 34376431 -60896220 + (GGGA)n Simple_repeat Simple_repeat 1 38 0 7 847 501 226 38 6 chr17 34377347 34377482 -60895169 + RSINE1 SINE B4 2 145 -147 7 847 226 319 8 65 chr17 34377482 34377732 -60894919 + G-rich Low_complexity Low_complexity 1 235 0 7 847 612 233 68 0 chr17 34378322 34378455 -60894196 - RSINE1 SINE B4 0 165 24 7 847 2233 204 62 139 chr17 34378472 34379133 -60893518 - RMER19C LTR ERVK 0 611 2 7 847 1210 276 0 25 chr17 34379929 34380204 -60892447 + B4 SINE B4 2 269 -23 7 847 519 17 0 0 chr17 34380221 34380281 -60892370 + (CA)n Simple_repeat Simple_repeat 1 60 0 7 847 471 87 0 0 chr17 34380603 34380672 -60891979 + (GGGA)n Simple_repeat Simple_repeat 3 71 0 7 847 384 297 85 77 chr17 34381757 34382005 -60890646 - L1MC5 LINE L1 -571 7390 7141 7 847 502 310 180 14 chr17 34382008 34382352 -60890299 + Charlie1a DNA MER1_type 98 498 -957 7 847 264 291 116 26 chr17 34382369 34382524 -60890127 - Lx8 LINE L1 -1 7472 7304 7 847 299 282 93 8 chr17 34382562 34382680 -60889971 - Lx8 LINE L1 -226 7247 7120 7 847 630 0 0 0 chr17 34383195 34383265 -60889386 + (GA)n Simple_repeat Simple_repeat 1 70 0 7 847 478 339 0 0 chr17 34383270 34383391 -60889260 - ID_B1 SINE B4 -21 203 83 7 847 1238 61 0 0 chr17 34383479 34383627 -60889024 - B1_Mus1 SINE Alu 0 148 1 7 847 462 291 105 33 chr17 34383657 34383810 -60888841 + RSINE1 SINE B4 2 165 0 7 847 242 211 56 14 chr17 34383920 34383992 -60888659 - L1MD LINE L1 -1407 4739 4665 7 847 1010 192 39 10 chr17 34384115 34384320 -60888331 - B3 SINE B2 -5 211 1 7 847 645 204 7 66 chr17 34384448 34384600 -60888051 - B1_Mm SINE Alu 0 147 5 7 847 364 244 64 71 chr17 34384707 34384848 -60887803 - B1F1 SINE Alu -1 148 9 7 847 293 136 17 0 chr17 34385349 34385408 -60887243 - L1MD LINE L1 -1793 4353 4294 7 847 221 77 0 49 chr17 34385642 34385683 -60886968 + (TCTCTG)n Simple_repeat Simple_repeat 4 42 0 7 847 263 181 50 0 chr17 34385683 34385765 -60886886 - PB1D9 SINE Alu 0 120 46 7 847 251 285 68 43 chr17 34385987 34386266 -60886385 - L1MC LINE L1 -2906 3240 2955 7 847 540 238 0 19 chr17 34386514 34386617 -60886034 + B1_Mur2 SINE Alu 17 117 -32 7 847 594 128 0 0 chr17 34386627 34386721 -60885930 + (CA)n Simple_repeat Simple_repeat 1 94 0 7 847 2505 140 55 0 chr17 34387811 34388210 -60884441 - MTC LTR MaLR 0 421 1 7 847 223 250 0 135 chr17 34388210 34388284 -60884367 - ID4 SINE ID -16 67 4 7 847 498 259 18 18 chr17 34388328 34388438 -60884213 + B1_Mus1 SINE Alu 4 113 -35 7 847 996 47 78 0 chr17 34389023 34389151 -60883500 + B1_Mus1 SINE Alu 1 138 -10 7 847 270 0 0 0 chr17 34389151 34389181 -60883470 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 7 847 522 200 261 0 chr17 34389195 34389360 -60883291 + B3 SINE B2 2 209 -7 7 847 189 74 0 0 chr17 34389678 34389705 -60882946 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 7 847 1495 233 76 25 chr17 34389765 34390162 -60882489 + MTD LTR MaLR 1 417 -2 7 847 264 263 74 124 chr17 34390177 34390276 -60882375 - YREP_Mm Unknown Unknown -1418 394 222 7 847 1031 79 7 0 chr17 34390276 34390415 -60882236 + B1_Mus1 SINE Alu 9 148 0 7 847 264 263 74 124 chr17 34390415 34390476 -60882175 - YREP_Mm Unknown Unknown -1418 221 111 7 847 535 305 104 76 chr17 34391488 34392016 -60880635 + L1MD LINE L1 3232 3774 -2372 7 847 242 279 114 0 chr17 34392016 34392095 -60880556 + ID_B1 SINE B4 77 164 -60 7 847 247 208 122 27 chr17 34392029 34392103 -60880548 + PB1D10 SINE Alu 10 90 -27 7 847 439 296 123 10 chr17 34392315 34392615 -60880036 + L1M5 LINE L1 4439 4772 -1374 7 847 831 10 0 0 chr17 34392615 34392711 -60879940 + (TCTA)n Simple_repeat Simple_repeat 2 97 0 7 847 4465 90 96 11 chr17 34392713 34393454 -60879197 + RMER17D2 LTR ERVK 6 809 0 7 847 388 311 62 72 chr17 34393494 34393851 -60878800 + MTEb LTR MaLR 7 370 -9 7 847 266 222 98 12 chr17 34394385 34394467 -60878184 + B3 SINE B2 125 213 -3 7 847 22 0 0 0 chr17 34394488 34394510 -60878141 + AT_rich Low_complexity Low_complexity 1 22 0 7 847 660 257 0 0 chr17 34396128 34396272 -60876379 - B1_Mur1 SINE Alu -5 144 1 7 847 374 336 34 48 chr17 34397172 34397319 -60875332 - B1F SINE Alu -2 147 3 7 847 397 372 102 4 chr17 34399360 34399595 -60873056 + Zaphod DNA Tip100 209 466 -3565 7 847 21 0 0 0 chr17 34401385 34401406 -60871245 + AT_rich Low_complexity Low_complexity 1 21 0 7 847 881 181 6 0 chr17 34402817 34402994 -60869657 + CT-rich Low_complexity Low_complexity 3 180 0 7 847 187 54 54 0 chr17 34402992 34403029 -60869622 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 7 847 1189 68 0 0 chr17 34403033 34403180 -60869471 - B1_Mus1 SINE Alu 0 148 2 7 847 3876 42 34 15 chr17 34403186 34403663 -60868988 - L1_Mus1 LINE L1 -2 6565 6080 7 847 29 70 0 0 chr17 34403895 34403952 -60868699 + AT_rich Low_complexity Low_complexity 1 57 0 7 847 515 175 2 32 chr17 34403961 34404067 -60868584 - B1_Mur3 SINE Alu -8 139 35 7 847 2869 106 24 24 chr17 34406293 34406746 -60865905 - RLTR11B LTR ERVK 0 453 1 7 847 200 302 11 55 chr17 34407403 34407585 -60865066 + (TCTCTG)n Simple_repeat Simple_repeat 6 179 0 7 847 400 305 87 35 chr17 34407594 34407684 -60864967 + MTEb LTR MaLR 190 289 -90 7 847 1478 73 16 0 chr17 34407684 34407875 -60864776 - B2_Mm2 SINE B2 -1 194 1 7 847 400 305 87 35 chr17 34407875 34407957 -60864694 + MTEb LTR MaLR 290 371 -8 7 847 777 22 0 0 chr17 34408413 34408504 -60864147 + (CA)n Simple_repeat Simple_repeat 2 92 0 7 847 468 0 0 0 chr17 34408504 34408555 -60864096 + (GA)n Simple_repeat Simple_repeat 2 53 0 7 847 558 259 20 54 chr17 34408557 34408612 -60864039 - B3 SINE B2 -74 142 93 7 847 3473 140 198 3 chr17 34408612 34409229 -60863422 - RMER19A LTR ERVK 0 737 1 7 847 558 259 20 54 chr17 34409229 34409320 -60863331 - B3 SINE B2 -124 92 1 7 847 23 54 0 0 chr17 34409791 34409828 -60862823 + AT_rich Low_complexity Low_complexity 1 37 0 7 847 528 181 32 0 chr17 34410274 34410368 -60862283 + RMER19A LTR ERVK 245 341 -396 7 847 839 296 28 17 chr17 34410710 34411071 -60861580 + MurERV4-int LTR ERVK 927 1291 -7668 7 847 1178 81 0 0 chr17 34411074 34411222 -60861429 + B1_Mus1 SINE Alu 1 148 0 7 847 299 274 0 0 chr17 34411232 34411316 -60861335 + MurERV4-int LTR ERVK 2110 2193 -3067 7 847 2070 80 45 51 chr17 34411322 34411595 -60861056 - ORR1A4 LTR MaLR 0 329 58 7 847 3229 68 45 7 chr17 34411595 34412022 -60860629 - L1_Mus3 LINE L1 0 6638 6196 7 847 2070 80 45 51 chr17 34412022 34412079 -60860572 - ORR1A4 LTR MaLR -272 57 1 7 847 3271 278 40 8 chr17 34412083 34412823 -60859828 + MurERV4-int LTR ERVK 2203 2968 -2292 7 847 315 71 0 0 chr17 34412823 34412865 -60859786 + (CAT)n Simple_repeat Simple_repeat 2 43 0 7 847 3271 278 40 8 chr17 34412865 34413089 -60859562 + MurERV4-int LTR ERVK 2969 3197 -2063 7 847 2067 231 47 18 chr17 34413090 34413585 -60859066 + RLTR11A2 LTR ERVK 19 527 0 7 847 2135 216 11 2 chr17 34413585 34414048 -60858603 + MurERV4-int LTR ERVK 3168 3634 -1626 7 847 1571 200 50 75 chr17 34414069 34414179 -60858472 + RMER6A LTR ERVK 57 166 -590 7 847 1761 128 112 0 chr17 34414179 34414475 -60858176 - ORR1A4 LTR MaLR 0 329 1 7 847 1571 205 59 72 chr17 34414475 34414889 -60857762 + RMER6A LTR ERVK 167 604 -116 7 847 5358 147 137 36 chr17 34414900 34415154 -60857497 - RMER12 LTR ERVK -97 1225 999 7 847 4281 160 79 80 chr17 34415154 34416057 -60856594 - RMER19B LTR ERVK 0 902 1 7 847 5358 147 137 36 chr17 34416057 34416085 -60856566 - RMER12 LTR ERVK -324 998 953 7 847 2795 99 65 5 chr17 34416085 34416501 -60856150 + BGLII_B LTR ERVK 1 441 0 7 847 5358 147 137 36 chr17 34416501 34417283 -60855368 - RMER12 LTR ERVK -370 952 53 7 847 215 331 45 0 chr17 34418093 34418226 -60854425 + (ATGGTG)n Simple_repeat Simple_repeat 1 139 0 7 847 1064 242 96 50 chr17 34418894 34419216 -60853435 - MTEb LTR MaLR 0 379 43 7 847 434 302 84 0 chr17 34419333 34419452 -60853199 - B1F2 SINE Alu -7 142 14 7 847 387 0 0 0 chr17 34421765 34421808 -60850843 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 847 234 0 0 0 chr17 34421808 34421833 -60850818 + (GA)n Simple_repeat Simple_repeat 2 27 0 8 847 196 318 0 15 chr17 34423060 34423127 -60849524 + L2b LINE L2 3240 3305 -70 8 847 534 278 113 9 chr17 34423257 34423486 -60849165 - ORSL DNA Tip100 -2 273 21 8 847 293 308 19 0 chr17 34423975 34424079 -60848572 - PB1D10 SINE Alu -7 110 5 8 847 28 0 0 0 chr17 34425512 34425540 -60847111 + AT_rich Low_complexity Low_complexity 1 28 0 8 847 710 277 149 21 chr17 34425975 34426263 -60846388 + MLT2C1 LTR ERVL 2 326 -71 8 847 441 266 111 7 chr17 34426380 34426434 -60846217 - RMER15 LTR ERVL -138 437 383 8 847 420 20 0 0 chr17 34426434 34426483 -60846168 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 847 441 266 111 7 chr17 34426483 34426572 -60846079 - RMER15 LTR ERVL -193 382 281 8 847 918 195 53 5 chr17 34426659 34426865 -60845786 + B3 SINE B2 1 216 0 8 847 346 258 101 50 chr17 34426969 34427108 -60845543 + B3 SINE B2 71 216 0 8 847 651 247 28 17 chr17 34427286 34427467 -60845184 - B3A SINE B2 -15 183 1 8 847 241 268 141 0 chr17 34427671 34427742 -60844909 + L1ME2z LINE L1 6050 6130 -34 8 847 301 224 17 0 chr17 34428023 34428081 -60844570 - PB1D10 SINE Alu -36 81 23 8 847 1065 130 22 43 chr17 34428093 34428278 -60844373 - URR1A DNA MER1_type -1 225 45 8 847 31 44 0 0 chr17 34429236 34429281 -60843370 + AT_rich Low_complexity Low_complexity 1 45 0 8 847 854 144 62 0 chr17 34429781 34429922 -60842729 + B3 SINE B2 1 150 -66 8 847 451 45 15 15 chr17 34429922 34429989 -60842662 + (CA)n Simple_repeat Simple_repeat 2 68 0 8 847 840 191 78 6 chr17 34429989 34430026 -60842625 + B3A SINE B2 153 192 -6 8 847 216 216 0 0 chr17 34430394 34430445 -60842206 + (ATG)n Simple_repeat Simple_repeat 1 51 0 8 847 440 296 96 0 chr17 34431472 34431587 -60841064 + RSINE1 SINE B4 5 130 -35 8 847 387 0 0 0 chr17 34431603 34431646 -60841005 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 847 1147 194 19 0 chr17 34432348 34432554 -60840097 - B3 SINE B2 -6 210 1 8 847 21 0 0 0 chr17 34432555 34432576 -60840075 + AT_rich Low_complexity Low_complexity 1 21 0 8 847 225 258 0 16 chr17 34433433 34433496 -60839155 + GA-rich Low_complexity Low_complexity 1 62 0 8 847 815 249 10 5 chr17 34433839 34434033 -60838618 - ID_B1 SINE B4 -26 198 4 8 847 552 214 119 0 chr17 34434347 34434473 -60838178 - B1F SINE Alu -2 147 7 8 847 523 324 85 4 chr17 34435102 34435350 -60837301 + Lx9 LINE L1 7205 7472 -172 8 847 341 152 20 0 chr17 34435882 34435981 -60836670 + (CAGA)n Simple_repeat Simple_repeat 4 104 0 8 847 458 162 25 0 chr17 34436144 34436224 -60836427 - PB1D7 SINE Alu -21 99 18 8 847 770 234 46 10 chr17 34436611 34436805 -60835846 - B3 SINE B2 -14 202 2 8 847 35 41 0 0 chr17 34436812 34436861 -60835790 + AT_rich Low_complexity Low_complexity 1 49 0 8 847 545 105 12 0 chr17 34436919 34437005 -60835646 + (TG)n Simple_repeat Simple_repeat 2 88 0 8 847 643 176 0 70 chr17 34437005 34437133 -60835518 - B3A SINE B2 -79 119 1 8 847 304 22 44 0 chr17 34437412 34437457 -60835194 + (TGGGGG)n Simple_repeat Simple_repeat 2 48 0 8 847 360 0 0 0 chr17 34438602 34438642 -60834009 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 8 847 747 159 32 0 chr17 34438882 34439008 -60833643 - B1F SINE Alu -19 130 1 8 847 784 171 117 28 chr17 34439089 34439249 -60833402 + B3A SINE B2 1 180 -18 8 847 450 0 0 0 chr17 34439249 34439299 -60833352 + (TC)n Simple_repeat Simple_repeat 1 50 0 8 847 387 73 0 0 chr17 34439299 34439353 -60833298 + (CA)n Simple_repeat Simple_repeat 1 55 0 8 847 784 171 117 28 chr17 34439353 34439371 -60833280 + B3A SINE B2 181 195 -3 8 847 315 0 0 0 chr17 34440292 34440327 -60832324 + (TC)n Simple_repeat Simple_repeat 2 36 0 8 847 402 100 0 0 chr17 34440327 34440386 -60832265 + (TG)n Simple_repeat Simple_repeat 1 60 0 8 847 887 261 76 25 chr17 34440422 34440697 -60831954 - B4A SINE B4 -3 289 1 8 847 457 286 84 45 chr17 34440796 34440950 -60831701 + RSINE1 SINE B4 6 165 0 8 847 358 291 29 10 chr17 34441020 34441124 -60831527 + PB1D10 SINE Alu 3 108 -9 8 847 678 25 0 0 chr17 34441125 34441205 -60831446 + (GA)n Simple_repeat Simple_repeat 1 80 0 8 847 230 226 113 0 chr17 34441206 34441268 -60831383 + ID4 SINE ID 5 73 -10 8 847 549 25 38 0 chr17 34441556 34441635 -60831016 + (TC)n Simple_repeat Simple_repeat 1 82 0 8 847 25 0 0 0 chr17 34442257 34442282 -60830369 + AT_rich Low_complexity Low_complexity 1 25 0 8 847 283 304 0 38 chr17 34442293 34442399 -60830252 - Lx8 LINE L1 -19 7454 7353 8 847 288 0 0 0 chr17 34442402 34442434 -60830217 + (CAA)n Simple_repeat Simple_repeat 2 33 0 8 847 186 71 0 0 chr17 34442448 34442476 -60830175 + (CAAA)n Simple_repeat Simple_repeat 4 31 0 8 847 572 181 8 17 chr17 34442533 34442651 -60830000 - PB1D9 SINE Alu -1 119 3 8 847 757 179 243 0 chr17 34443987 34444160 -60828491 + B3 SINE B2 2 216 0 8 847 258 315 83 14 chr17 34444193 34444338 -60828313 + MIRb SINE MIR 91 245 -23 8 847 369 207 0 0 chr17 34445549 34445631 -60827020 + (TA)n Simple_repeat Simple_repeat 2 83 0 8 847 795 156 0 18 chr17 34445634 34445797 -60826854 + Lx9 LINE L1 7478 7637 -7 8 847 578 254 96 8 chr17 34445800 34446050 -60826601 + Lx7 LINE L1 7231 7502 -194 8 847 264 321 66 0 chr17 34446874 34446980 -60825671 - B3A SINE B2 -41 157 45 8 847 4696 43 12 2 chr17 34447229 34447787 -60824864 - LTRIS2 LTR ERV1 0 564 1 8 847 910 246 26 0 chr17 34447788 34448016 -60824635 - RLTR1B-int LTR ERV1 -42 5021 4788 8 847 1735 284 53 24 chr17 34448007 34448558 -60824093 - RLTR1B-int LTR ERV1 -792 4271 3705 8 847 2654 56 0 9 chr17 34448545 34448870 -60823781 - RLTR1B-int LTR ERV1 -744 2555 2234 8 847 286 244 0 37 chr17 34448857 34448938 -60823713 - RMER17C-int LTR ERVK -1984 1254 1177 8 847 232 196 0 38 chr17 34449849 34449902 -60822749 + RMER5 LTR ERV1 78 128 -406 8 847 1976 161 43 12 chr17 34449892 34450238 -60822413 - MTC LTR MaLR -64 357 1 8 847 288 53 0 0 chr17 34451021 34451059 -60821592 + (CAGG)n Simple_repeat Simple_repeat 2 39 0 8 847 1779 151 90 20 chr17 34453224 34453568 -60819083 - RLTR9A LTR ERVK 0 368 1 8 847 562 257 65 39 chr17 34454181 34454275 -60818376 - RLTR20D LTR ERVK -4 564 474 8 847 414 0 0 0 chr17 34454275 34454321 -60818330 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 847 562 257 65 39 chr17 34454321 34454380 -60818271 - RLTR20D LTR ERVK -95 473 408 8 847 539 286 106 40 chr17 34454360 34454586 -60818065 - RLTR20D LTR ERVK -277 291 51 8 847 204 40 0 0 chr17 34454624 34454649 -60818002 + (TAA)n Simple_repeat Simple_repeat 1 25 0 8 847 5232 155 54 40 chr17 34454650 34455005 -60817646 - MYSERV16_I-int LTR ERVK -31 2295 1955 8 847 530 157 101 9 chr17 34455005 34455114 -60817537 - PB1D9 SINE Alu 0 120 2 8 847 5232 155 54 40 chr17 34455114 34455878 -60816773 - MYSERV16_I-int LTR ERVK -372 1954 1161 8 847 5788 148 44 13 chr17 34455860 34456960 -60815691 + MYSERV16_I-int LTR ERVK 1172 2305 -21 8 847 1280 20 0 0 chr17 34456968 34457114 -60815537 - B1_Mus2 SINE Alu 0 147 2 8 847 2464 199 115 29 chr17 34457154 34457677 -60814974 + RLTR20D LTR ERVK 1 568 0 8 847 595 161 97 0 chr17 34457677 34457801 -60814850 - RLTR18-int LTR ERVK -542 4819 4684 8 847 359 263 40 0 chr17 34457827 34457926 -60814725 - RLTR18-int LTR ERVK -663 4698 4596 8 847 969 195 9 0 chr17 34458192 34458402 -60814249 - L1_Mur3 LINE L1 -4298 1582 1371 8 847 1304 158 60 137 chr17 34458402 34458717 -60813934 - RMER19B LTR ERVK -611 291 1 8 847 2137 220 138 4 chr17 34458726 34459423 -60813228 + L1_Mur3 LINE L1 2759 3548 -2332 8 847 2158 133 29 11 chr17 34459430 34459780 -60812871 + RLTR31A_Mm LTR ERVK 6 361 -223 8 847 4542 189 61 29 chr17 34459842 34460115 -60812536 + L1_Mur3 LINE L1 3987 4277 -1603 8 847 1251 35 0 0 chr17 34460115 34460260 -60812391 + B1_Mus2 SINE Alu 1 145 -2 8 847 4542 189 61 29 chr17 34460260 34461090 -60811561 + L1_Mur3 LINE L1 4278 5125 -755 8 847 1137 106 20 1 chr17 34461103 34461273 -60811378 + B2_Mm1t SINE B2 20 191 -2 8 847 594 224 109 26 chr17 34461273 34461502 -60811149 + L1_Mur3 LINE L1 5122 5369 -511 8 847 220 53 53 0 chr17 34461502 34461540 -60811111 + (TTTTTA)n Simple_repeat Simple_repeat 4 43 0 8 847 1065 39 0 0 chr17 34461607 34461737 -60810914 + (GA)n Simple_repeat Simple_repeat 1 130 0 8 847 1571 225 68 16 chr17 34463677 34464175 -60808476 + RLTR12B LTR ERVK 20 564 -4 8 847 1364 298 108 36 chr17 34464184 34465250 -60807401 - L1M2 LINE L1 -1988 4155 3013 8 847 946 314 48 56 chr17 34465608 34465725 -60806926 - L1M2 LINE L1 -3205 2938 2834 8 847 1370 86 5 5 chr17 34465725 34465913 -60806738 - B2_Mm2 SINE B2 -6 189 2 8 847 946 314 48 56 chr17 34465913 34466612 -60806039 - L1M2 LINE L1 -3310 2833 2129 8 847 945 281 45 71 chr17 34466966 34467319 -60805332 + ORR1E LTR MaLR 5 348 -11 8 847 791 29 19 0 chr17 34467438 34467529 -60805122 + (TTCTC)n Simple_repeat Simple_repeat 4 94 0 8 847 1250 69 0 11 chr17 34467529 34467704 -60804947 + (TCCCC)n Simple_repeat Simple_repeat 4 176 0 8 847 791 29 19 0 chr17 34467704 34467715 -60804936 + (TTCTC)n Simple_repeat Simple_repeat 1 13 0 8 847 188 341 126 22 chr17 34468159 34468294 -60804357 + MIR SINE MIR 82 230 -32 8 847 2139 96 78 13 chr17 34468443 34468750 -60803901 - ORR1A2 LTR MaLR 0 327 1 8 847 1838 136 6 105 chr17 34468944 34469306 -60803345 - ORR1A3 LTR MaLR 0 326 1 8 847 735 252 28 43 chr17 34469612 34469823 -60802828 + MTD LTR MaLR 1 208 -211 8 847 240 200 0 0 chr17 34469853 34469933 -60802718 + CT-rich Low_complexity Low_complexity 2 81 0 8 847 432 0 0 0 chr17 34470526 34470574 -60802077 + (TG)n Simple_repeat Simple_repeat 2 49 0 8 847 197 33 33 0 chr17 34470579 34470609 -60802042 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 8 847 279 250 27 14 chr17 34470689 34470762 -60801889 - B4 SINE B4 -217 75 2 8 848 183 100 0 0 chr17 34473610 34473640 -60799011 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 848 354 202 85 66 chr17 34473693 34473799 -60798852 - B1_Mur3 SINE Alu -41 108 1 8 848 4911 193 65 32 chr17 34473825 34475764 -60796887 - Lx5 LINE L1 -5 7045 4991 8 848 1164 192 28 0 chr17 34475766 34475980 -60796671 - ORR1B2 LTR MaLR -147 220 1 8 848 977 121 7 0 chr17 34476202 34476343 -60796308 + B1_Mus1 SINE Alu 2 143 -5 8 848 459 92 0 0 chr17 34476343 34476408 -60796243 + (GGA)n Simple_repeat Simple_repeat 3 67 0 9 848 207 0 0 0 chr17 34476752 34476775 -60795876 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9 848 337 312 117 95 chr17 34477047 34477595 -60795056 - L1M5 LINE L1 -1774 4372 3813 9 848 393 285 53 9 chr17 34477827 34477955 -60794696 + MTE2a LTR MaLR 256 407 -14 9 848 242 238 64 82 chr17 34477968 34478078 -60794573 - ORR1E LTR MaLR -169 190 83 9 848 489 34 0 0 chr17 34478469 34478528 -60794123 + (CA)n Simple_repeat Simple_repeat 1 59 0 9 848 24 32 0 0 chr17 34478916 34478947 -60793704 + AT_rich Low_complexity Low_complexity 1 31 0 9 848 973 255 0 0 chr17 34480119 34480323 -60792328 + B3 SINE B2 1 204 -12 9 848 234 0 0 0 chr17 34481135 34481161 -60791490 + (A)n Simple_repeat Simple_repeat 1 26 0 9 848 814 258 100 53 chr17 34481883 34482215 -60790436 - Lx8 LINE L1 -197 7276 6912 9 848 247 283 21 52 chr17 34483409 34483506 -60789145 - MIRb SINE MIR -44 224 131 9 848 679 299 29 0 chr17 34485454 34485695 -60786956 - L1M2 LINE L1 -1422 4721 4474 9 848 217 390 13 13 chr17 34485714 34485792 -60786859 - ID4 SINE ID -1 82 5 9 848 213 297 107 13 chr17 34485799 34485874 -60786777 - B1F SINE Alu 0 149 68 9 848 306 254 150 17 chr17 34485807 34485927 -60786724 - ID_B1 SINE B4 -8 216 81 9 848 438 20 0 0 chr17 34485951 34486002 -60786649 + (TG)n Simple_repeat Simple_repeat 2 52 0 9 848 252 304 0 43 chr17 34486038 34486155 -60786496 - L1M2 LINE L1 -1772 4368 4257 9 848 4440 144 82 76 chr17 34487355 34488289 -60784362 + RMER21A LTR ERV1 2 941 -6 9 848 180 188 31 15 chr17 34488465 34488530 -60784121 + CT-rich Low_complexity Low_complexity 6 71 0 9 848 269 336 63 9 chr17 34488735 34488846 -60783805 - MTE2a LTR MaLR -191 188 72 9 848 4616 142 111 12 chr17 34488880 34489690 -60782961 + RMER19B LTR ERVK 1 890 -12 9 848 285 180 0 0 chr17 34489711 34489761 -60782890 - MTE2a LTR MaLR -327 52 3 9 848 964 122 13 7 chr17 34489764 34489913 -60782738 + B1_Mur4 SINE Alu 1 150 0 9 848 386 266 174 6 chr17 34489918 34490109 -60782542 + L1MEg LINE L1 1989 2105 -4137 9 848 224 195 67 84 chr17 34490495 34490674 -60781977 + (CTGTG)n Simple_repeat Simple_repeat 2 177 0 9 848 548 229 28 0 chr17 34492175 34492284 -60780367 - PB1D7 SINE Alu -8 112 1 9 848 226 317 132 19 chr17 34492420 34492436 -60780215 + B1_Mur1 SINE Alu 13 130 -19 9 848 365 222 89 0 chr17 34492436 34492526 -60780125 + ID_B1 SINE B4 108 205 -19 9 848 2110 186 51 5 chr17 34492693 34493082 -60779569 - MTD LTR MaLR -1 418 12 9 848 351 44 0 0 chr17 34493671 34493716 -60778935 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 848 513 323 31 6 chr17 34493722 34493881 -60778770 - RSINE1 SINE B4 -1 164 2 9 848 498 181 9 19 chr17 34493891 34493998 -60778653 - ID_B1 SINE B4 -15 209 104 9 848 633 236 104 22 chr17 34494432 34494614 -60778037 + B3A SINE B2 2 198 0 9 848 1177 193 24 10 chr17 34495452 34495661 -60776990 - B3 SINE B2 0 216 5 9 848 399 41 0 0 chr17 34495661 34495710 -60776941 + (TCC)n Simple_repeat Simple_repeat 3 51 0 9 848 1202 42 0 0 chr17 34495712 34495854 -60776797 - B1_Mm SINE Alu -5 142 1 9 848 681 265 109 75 chr17 34495864 34496239 -60776412 - Lx8 LINE L1 -10 7463 7076 9 848 243 333 36 18 chr17 34496458 34496537 -60776114 - L1M1 LINE L1 -424 5876 5793 9 848 951 185 61 5 chr17 34496537 34496733 -60775918 + B3 SINE B2 5 211 -5 9 848 243 333 36 18 chr17 34496733 34496821 -60775830 - L1M1 LINE L1 -508 5792 5707 9 848 207 116 0 65 chr17 34496916 34496962 -60775689 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 9 848 528 16 0 0 chr17 34497802 34497863 -60774788 + (TC)n Simple_repeat Simple_repeat 1 61 0 9 848 263 241 45 40 chr17 34498630 34498807 -60773844 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 9 848 311 186 29 10 chr17 34498875 34498978 -60773673 + (TCTA)n Simple_repeat Simple_repeat 2 106 0 9 848 413 239 24 79 chr17 34498989 34499116 -60773535 - PB1D7 SINE Alu 0 120 1 9 848 2431 237 102 20 chr17 34500746 34501383 -60771268 - Lx8 LINE L1 -121 7352 6664 1 848 239 71 24 0 chr17 34502473 34502515 -60770136 + (TTG)n Simple_repeat Simple_repeat 3 45 0 2 848 396 210 80 0 chr17 34502518 34502618 -60770033 - PB1D10 SINE Alu -5 112 5 3 848 312 188 0 0 chr17 34502652 34502721 -60769930 + CT-rich Low_complexity Low_complexity 3 71 0 4 848 28 29 0 0 chr17 34502782 34502817 -60769834 + AT_rich Low_complexity Low_complexity 1 35 0 5 848 313 68 0 63 chr17 34502873 34502936 -60769715 + (TCTCTG)n Simple_repeat Simple_repeat 6 64 0 6 848 198 0 0 0 chr17 34502936 34502958 -60769693 + (TG)n Simple_repeat Simple_repeat 2 23 0 7 848 914 235 19 19 chr17 34503722 34503930 -60768721 + B3 SINE B2 2 209 -7 8 848 711 178 0 0 chr17 34504075 34504193 -60768458 + B3 SINE B2 1 118 -98 9 848 340 351 84 38 chr17 34504350 34504611 -60768040 + LTR53 LTR ERVL 193 465 -54 1 848 3271 29 45 0 chr17 34504944 34505323 -60767328 - MTA_Mm LTR MaLR 0 396 1 1 848 1312 186 0 0 chr17 34506207 34506422 -60766229 + B3 SINE B2 1 215 -1 1 848 1627 180 86 17 chr17 34506645 34506995 -60765656 - ORR1D1 LTR MaLR 0 374 1 1 848 588 230 172 39 chr17 34507945 34508230 -60764421 + Lx8 LINE L1 7151 7473 0 1 848 405 189 229 10 chr17 34508483 34508579 -60764072 + PB1D9 SINE Alu 3 119 -1 1 848 1005 110 20 0 chr17 34508766 34508912 -60763739 + B1_Mur4 SINE Alu 2 150 0 1 848 1349 180 108 24 chr17 34509052 34509348 -60763303 + MTD LTR MaLR 53 373 -46 1 848 296 24 0 24 chr17 34509349 34509391 -60763260 + (TTTTC)n Simple_repeat Simple_repeat 4 44 0 1 848 1193 101 0 6 chr17 34509391 34509571 -60763080 + (TTTCC)n Simple_repeat Simple_repeat 2 180 0 1 848 536 0 16 0 chr17 34509571 34509635 -60763016 + (TTTTC)n Simple_repeat Simple_repeat 1 65 0 2 848 4035 73 2 2 chr17 34511219 34511738 -60760913 + L1_Mus2 LINE L1 6047 6565 -1 2 848 315 308 92 30 chr17 34511892 34512056 -60760595 + MIR SINE MIR 35 208 -54 2 848 3825 92 41 30 chr17 34512310 34512871 -60759780 - RMER2 LTR ERV1 0 567 1 2 848 849 223 68 9 chr17 34512999 34513207 -60759444 + B3A SINE B2 3 216 0 2 848 847 246 66 5 chr17 34513529 34513725 -60758926 + B3 SINE B2 1 208 -8 2 848 312 200 189 0 chr17 34515158 34515253 -60757398 - MTEa LTR MaLR -7 372 260 2 848 228 242 32 0 chr17 34515459 34515521 -60757130 - ID4 SINE ID -18 65 2 2 848 213 211 0 0 chr17 34515592 34515644 -60757007 + (TATG)n Simple_repeat Simple_repeat 3 54 0 2 848 228 143 0 0 chr17 34516034 34516076 -60756575 + (TCCC)n Simple_repeat Simple_repeat 2 43 0 2 848 662 217 8 4 chr17 34516876 34517382 -60755269 + (TG)n Simple_repeat Simple_repeat 1 508 0 3 848 532 220 213 0 chr17 34517395 34517536 -60755115 - B4A SINE B4 0 292 122 3 848 330 242 93 83 chr17 34519557 34519665 -60752986 - PB1D7 SINE Alu -8 112 4 3 848 460 200 0 14 chr17 34519762 34519904 -60752747 + (TG)n Simple_repeat Simple_repeat 1 140 0 3 848 227 169 16 33 chr17 34519919 34519980 -60752671 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 848 878 226 34 10 chr17 34520232 34520438 -60752213 + B3 SINE B2 1 211 -5 3 848 843 209 24 3 chr17 34520826 34521119 -60751532 + C-rich Low_complexity Low_complexity 1 299 0 3 848 527 177 16 39 chr17 34522028 34522210 -60750441 + CT-rich Low_complexity Low_complexity 1 178 0 3 848 1831 204 81 15 chr17 34523156 34523511 -60749140 + MTD LTR MaLR 1 373 -46 3 848 1628 184 63 16 chr17 34523511 34523875 -60748776 - ORR1C2 LTR MaLR -3 381 1 3 848 1831 204 81 15 chr17 34523875 34523912 -60748739 + MTD LTR MaLR 374 419 0 3 848 180 0 0 0 chr17 34524042 34524062 -60748589 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 848 1004 92 0 0 chr17 34524068 34524199 -60748452 - B1_Mus1 SINE Alu -17 131 1 4 848 405 359 0 0 chr17 34525036 34525206 -60747445 + (CCTG)n Simple_repeat Simple_repeat 3 172 0 4 848 1258 169 14 0 chr17 34525578 34525785 -60746866 - B3 SINE B2 -6 210 1 4 848 2356 76 35 3 chr17 34526238 34526555 -60746096 - ORR1A2 LTR MaLR 0 327 1 4 848 793 234 96 0 chr17 34526914 34527102 -60745549 + B3 SINE B2 1 206 -10 4 848 310 284 64 73 chr17 34527216 34527326 -60745325 + RSINE1 SINE B4 10 118 -47 4 848 333 0 0 0 chr17 34527340 34527377 -60745274 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 848 3120 66 0 22 chr17 34527377 34527584 -60745067 - MTB_Mm LTR MaLR 0 407 206 4 848 2869 49 6 0 chr17 34527584 34527928 -60744723 + ORR1A1 LTR MaLR 1 346 0 4 848 3120 66 0 22 chr17 34527928 34528136 -60744515 - MTB_Mm LTR MaLR -202 205 1 4 848 207 256 0 0 chr17 34528136 34528226 -60744425 + (CA)n Simple_repeat Simple_repeat 1 90 0 4 848 1109 255 30 41 chr17 34528991 34529257 -60743394 + RLTR21 LTR ERVK 1 263 -1309 5 848 180 0 0 0 chr17 34529775 34529795 -60742856 + (T)n Simple_repeat Simple_repeat 1 20 0 5 848 1389 178 65 36 chr17 34530440 34530719 -60741932 + RLTR21 LTR ERVK 247 533 -1039 5 848 3126 119 36 4 chr17 34530741 34531213 -60741438 - RLTR1C LTR ERV1 -16 487 1 5 848 3056 216 34 81 chr17 34531213 34532182 -60740469 + RLTR21 LTR ERVK 525 1447 -125 5 848 24 0 0 0 chr17 34532348 34532372 -60740279 + AT_rich Low_complexity Low_complexity 1 24 0 5 848 713 277 126 104 chr17 34532784 34532899 -60739752 + RLTR20C LTR ERVK 1 120 -431 5 848 1193 68 7 0 chr17 34532899 34533046 -60739605 + B1_Mus1 SINE Alu 1 148 0 5 848 892 200 64 90 chr17 34533046 34533376 -60739275 + RLTR20C LTR ERVK 107 459 -92 5 848 342 0 0 0 chr17 34533376 34533414 -60739237 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 848 713 277 126 104 chr17 34533414 34533506 -60739145 + RLTR20C LTR ERVK 460 551 0 5 848 330 212 15 0 chr17 34533550 34533616 -60739035 + RMER21A LTR ERV1 159 225 -722 5 848 231 330 78 0 chr17 34533616 34533731 -60738920 - MIR SINE MIR -55 207 84 5 848 1953 92 15 0 chr17 34533789 34534062 -60738589 - L1_Mus3 LINE L1 -7 6631 6355 5 848 4426 143 97 50 chr17 34535894 34536296 -60736355 + RMER21A LTR ERV1 17 418 -529 6 848 243 0 0 0 chr17 34536296 34536323 -60736328 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 848 4426 143 97 50 chr17 34536323 34536809 -60735842 + RMER21A LTR ERV1 419 946 -1 6 848 2751 147 20 11 chr17 34536815 34537261 -60735390 + RodERV21-int LTR ERV1 3 452 -4539 6 848 3193 200 47 37 chr17 34537266 34537988 -60734663 + RodERV21-int LTR ERV1 272 1000 -3991 6 848 856 233 53 73 chr17 34538225 34538527 -60734124 + RLTR42-int LTR ERVK 1107 1328 -4194 6 848 336 250 0 0 chr17 34538776 34538844 -60733807 + RodERV21-int LTR ERV1 1003 1070 -3921 6 848 5686 186 58 29 chr17 34538907 34539617 -60733034 + RodERV21-int LTR ERV1 1538 2282 -2709 6 848 2657 175 26 37 chr17 34539617 34539678 -60732973 - RMER16 LTR ERVK 0 533 465 6 848 207 0 0 0 chr17 34539678 34539701 -60732950 + (CAA)n Simple_repeat Simple_repeat 2 24 0 6 848 2657 175 26 37 chr17 34539701 34540178 -60732473 - RMER16 LTR ERVK -69 464 2 6 848 5686 186 58 29 chr17 34540178 34540614 -60732037 + RodERV21-int LTR ERV1 2283 2718 -2273 6 848 14231 70 21 17 chr17 34540821 34541407 -60731244 - L1VL2 LINE L1 -626 2989 2401 6 848 1421 80 11 0 chr17 34541407 34541595 -60731056 - B2_Mm1t SINE B2 -3 190 1 6 848 14231 71 24 18 chr17 34541595 34543139 -60729512 - L1VL2 LINE L1 -1215 2400 825 6 848 1357 64 26 26 chr17 34543139 34543169 -60729482 - B2_Mm1a SINE B2 -1 192 160 6 848 279 0 0 0 chr17 34543169 34543200 -60729451 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 6 848 1357 64 26 26 chr17 34543200 34543361 -60729290 - B2_Mm1a SINE B2 -34 159 1 6 848 5704 79 125 42 chr17 34543361 34544059 -60728592 - L1VL2 LINE L1 -5511 824 73 6 848 1411 160 29 36 chr17 34545365 34545644 -60727007 + RodERV21-int LTR ERV1 3502 3778 -1213 6 848 1945 215 14 31 chr17 34545642 34546055 -60726596 + RodERV21-int LTR ERV1 4455 4860 -131 6 848 3005 108 52 30 chr17 34546060 34546558 -60726093 + RMER21A LTR ERV1 439 947 0 7 848 301 250 15 0 chr17 34547095 34547163 -60725488 - ID4 SINE ID -10 73 5 7 848 240 336 84 28 chr17 34547169 34547182 -60725469 - PB1D10 SINE Alu 0 117 5 7 848 271 330 32 32 chr17 34547182 34547276 -60725375 - ID_B1 SINE B4 -45 179 86 7 848 1090 254 25 11 chr17 34547375 34547661 -60724990 + B4 SINE B4 1 290 -2 7 848 379 78 31 0 chr17 34547705 34547769 -60724882 + (CA)n Simple_repeat Simple_repeat 1 66 0 7 848 359 270 59 34 chr17 34548649 34548768 -60723883 - RCHARR1 DNA MER1_type -39 935 814 7 848 225 0 0 0 chr17 34548780 34548805 -60723846 + (TG)n Simple_repeat Simple_repeat 2 26 0 7 848 561 196 201 7 chr17 34548843 34548992 -60723659 + B3A SINE B2 3 180 -18 7 848 592 302 34 102 chr17 34549043 34549367 -60723284 - RCHARR1 DNA MER1_type -464 510 209 7 848 275 326 12 0 chr17 34549691 34549777 -60722874 + L1M2 LINE L1 5690 5776 -515 7 848 452 369 19 34 chr17 34550052 34550321 -60722330 + MLT-int LTR MaLR 865 1129 -606 8 848 329 307 40 0 chr17 34550318 34550419 -60722232 - B1F SINE Alu -42 107 3 8 848 235 239 0 0 chr17 34550504 34550550 -60722101 + (CATA)n Simple_repeat Simple_repeat 1 46 0 8 848 416 270 34 0 chr17 34550831 34550979 -60721672 - L1M2 LINE L1 -783 5357 5205 8 848 2683 136 1 5 chr17 34551069 34551463 -60721188 + ORR1B1 LTR MaLR 1 386 -8 8 848 333 0 0 0 chr17 34551467 34551504 -60721147 + (CA)n Simple_repeat Simple_repeat 1 37 0 8 848 429 36 0 0 chr17 34551507 34551562 -60721089 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 8 848 301 177 16 31 chr17 34551565 34551629 -60721022 - L1MC4a LINE L1 -1208 6674 6612 8 848 1001 295 102 6 chr17 34551708 34552226 -60720425 - L1M2 LINE L1 -2073 4070 3503 8 848 189 0 0 0 chr17 34552238 34552259 -60720392 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 8 848 529 303 144 38 chr17 34552914 34553178 -60719473 + B4A SINE B4 1 292 0 8 848 424 266 50 50 chr17 34555543 34555662 -60716989 + ID_B1 SINE B4 78 196 -28 9 848 1111 59 0 0 chr17 34556634 34556769 -60715882 + B1_Mus2 SINE Alu 1 135 -12 9 848 468 0 0 0 chr17 34556769 34556821 -60715830 + (CAAAA)n Simple_repeat Simple_repeat 3 54 0 9 848 920 212 66 25 chr17 34557658 34557856 -60714795 + B3 SINE B2 1 206 -10 9 848 204 67 0 0 chr17 34558476 34558506 -60714145 + (CA)n Simple_repeat Simple_repeat 2 31 0 9 848 281 364 40 0 chr17 34559348 34559447 -60713204 - MLT1A1 LTR MaLR -261 147 45 9 848 1317 350 76 40 chr17 34559467 34560216 -60712435 - MTE-int LTR MaLR -68 1512 737 9 848 459 309 152 41 chr17 34560860 34561400 -60711251 + L1M2 LINE L1 3511 4110 -2033 9 848 216 196 22 0 chr17 34561503 34561549 -60711102 + (TG)n Simple_repeat Simple_repeat 1 47 0 9 848 1058 229 85 30 chr17 34561768 34562064 -60710587 + MTD LTR MaLR 45 353 -68 9 848 353 22 22 0 chr17 34562106 34562152 -60710499 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 1 848 240 264 80 26 chr17 34562181 34562294 -60710357 + Lx8 LINE L1 7352 7470 -3 1 848 563 183 64 154 chr17 34562306 34562333 -60710318 - MTE-int LTR MaLR -27 1553 1529 1 848 1964 115 72 0 chr17 34562333 34562638 -60710013 - ORR1A2 LTR MaLR 0 327 1 1 848 3866 75 24 7 chr17 34562638 34563177 -60709474 - ORR1A2-int LTR MaLR 0 1963 1416 1 848 2212 124 26 11 chr17 34563184 34563536 -60709115 - ORR1A2-int LTR MaLR -1605 358 2 1 848 2254 109 12 12 chr17 34563537 34563862 -60708789 - ORR1A2 LTR MaLR 0 327 3 1 848 272 311 59 0 chr17 34563969 34564104 -60708547 + L1MA9 LINE L1 6103 6245 -67 1 848 2088 141 54 32 chr17 34564445 34564818 -60707833 - RMER19B LTR ERVK 0 902 522 1 848 189 74 0 0 chr17 34565413 34565440 -60707211 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 848 198 0 0 0 chr17 34565835 34565857 -60706794 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 848 2053 159 76 15 chr17 34566233 34566628 -60706023 - MTC LTR MaLR -2 419 1 1 848 257 295 85 51 chr17 34568569 34568687 -60703964 - MLT1D LTR MaLR -382 123 2 1 848 270 0 0 0 chr17 34568687 34568717 -60703934 + (GA)n Simple_repeat Simple_repeat 2 31 0 1 848 230 222 0 0 chr17 34568759 34568804 -60703847 - MTC LTR MaLR -3 418 374 1 848 3139 76 8 2 chr17 34568805 34569203 -60703448 - MTB LTR MaLR 0 400 1 1 848 7433 93 3 65 chr17 34569203 34570374 -60702277 - MTB-int LTR MaLR 0 1098 1 1 848 3237 70 0 2 chr17 34570374 34570775 -60701876 - MTB LTR MaLR 0 400 1 1 848 1641 125 142 4 chr17 34570777 34571058 -60701593 - MTC LTR MaLR -95 326 7 1 848 849 62 0 0 chr17 34571926 34572038 -60700613 + (CA)n Simple_repeat Simple_repeat 2 113 0 1 848 2357 93 0 66 chr17 34572329 34572676 -60699975 - ORR1A2 LTR MaLR -3 324 1 1 848 488 281 37 73 chr17 34573902 34574121 -60698530 - Lx9 LINE L1 -469 7175 6880 1 848 227 221 58 14 chr17 34574664 34574733 -60697918 - CR1_Mam LINE CR1 -610 1594 1523 1 848 603 42 0 31 chr17 34575056 34575154 -60697497 + (GTGTG)n Simple_repeat Simple_repeat 1 95 0 1 848 184 346 58 36 chr17 34575302 34575440 -60697211 + MER5B DNA MER1_type 30 170 -8 1 848 1090 67 164 0 chr17 34576349 34576514 -60696137 + B2_Mm2 SINE B2 3 194 -1 1 848 28 0 0 0 chr17 34576558 34576586 -60696065 + AT_rich Low_complexity Low_complexity 1 28 0 1 848 249 33 0 0 chr17 34578970 34579000 -60693651 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 848 329 62 21 0 chr17 34579006 34579054 -60693597 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 848 1620 141 0 8 chr17 34579058 34579308 -60693343 + ORR1A4 LTR MaLR 1 248 -81 1 848 246 128 0 0 chr17 34579309 34579348 -60693303 + (CATA)n Simple_repeat Simple_repeat 4 42 0 1 848 256 33 31 77 chr17 34581019 34581084 -60691567 + (TTTTG)n Simple_repeat Simple_repeat 2 63 0 1 848 1079 196 24 19 chr17 34581240 34581448 -60691203 + B3 SINE B2 1 209 -7 1 848 239 214 238 19 chr17 34582581 34582686 -60689965 + ID_B1 SINE B4 86 213 -11 1 848 341 272 28 42 chr17 34583523 34583665 -60688986 + B1F SINE Alu 10 149 0 1 848 234 259 74 0 chr17 34583767 34583848 -60688803 + ID_B1 SINE B4 87 173 -51 1 848 225 279 123 19 chr17 34583848 34583869 -60688782 + PB1D7 SINE Alu 6 118 -2 1 848 315 289 62 21 chr17 34584423 34584568 -60688083 + RSINE1 SINE B4 15 165 0 1 848 581 97 44 7 chr17 34584578 34584713 -60687938 + (CA)n Simple_repeat Simple_repeat 2 141 0 1 848 257 169 68 0 chr17 34585860 34585919 -60686732 + C-rich Low_complexity Low_complexity 2 64 0 1 848 322 206 86 29 chr17 34587610 34587715 -60684936 - MTEb LTR MaLR -38 341 231 1 848 213 296 0 0 chr17 34590538 34590592 -60682059 + RSINE1 SINE B4 93 146 -19 1 848 715 186 243 28 chr17 34591403 34591580 -60681071 - B3 SINE B2 0 216 2 1 848 200 188 0 0 chr17 34591830 34591862 -60680789 + polypurine Low_complexity Low_complexity 2 33 0 1 848 523 99 0 32 chr17 34593196 34593290 -60679361 + (CATA)n Simple_repeat Simple_repeat 2 92 0 1 848 568 179 242 58 chr17 34594646 34594836 -60677815 + URR1B DNA MER1_type 1 225 0 1 848 314 235 152 85 chr17 34595041 34595218 -60677433 + B2_Mm2 SINE B2 1 189 -6 1 848 401 362 107 0 chr17 34595878 34596055 -60676596 + MIR SINE MIR 21 216 -46 1 848 598 267 45 60 chr17 34596070 34596269 -60676382 + B3A SINE B2 2 197 -1 1 848 240 59 0 0 chr17 34596989 34597023 -60675628 + (CAG)n Simple_repeat Simple_repeat 1 34 0 1 848 265 272 11 21 chr17 34597334 34597428 -60675223 + GA-rich Low_complexity Low_complexity 1 93 0 1 848 321 26 0 0 chr17 34597772 34597810 -60674841 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 848 265 238 12 48 chr17 34598220 34598304 -60674347 + GA-rich Low_complexity Low_complexity 3 83 0 1 848 378 230 11 65 chr17 34598305 34598398 -60674253 + B3 SINE B2 48 135 -81 1 848 255 31 0 0 chr17 34598445 34598477 -60674174 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 848 230 143 0 23 chr17 34598708 34598751 -60673900 - MT2A LTR ERVL 0 493 452 1 848 360 200 25 0 chr17 34598764 34598884 -60673767 + (TA)n Simple_repeat Simple_repeat 1 123 0 1 848 504 158 61 0 chr17 34598913 34598995 -60673656 - MT2A LTR ERVL -446 87 1 1 848 3472 30 5 0 chr17 34599239 34599633 -60673018 - MTA_Mm LTR MaLR 0 396 1 1 848 9379 34 2 1 chr17 34599633 34600730 -60671921 - MTA_Mm-int LTR MaLR 0 1098 1 1 848 3495 28 5 0 chr17 34600730 34601124 -60671527 - MTA_Mm LTR MaLR 0 396 1 1 848 9379 34 2 1 chr17 34601124 34602221 -60670430 - MTA_Mm-int LTR MaLR 0 1098 1 1 848 3433 43 0 0 chr17 34602221 34602617 -60670034 - MTA_Mm LTR MaLR 0 396 1 1 848 291 332 50 103 chr17 34602892 34602963 -60669688 - MER58B DNA MER1_type -47 294 228 1 13 1946 85 163 3 chr17 34602963 34603245 -60669406 + ORR1A2 LTR MaLR 1 327 0 1 849 291 332 50 103 chr17 34603245 34603435 -60669216 - MER58B DNA MER1_type -114 227 47 1 849 198 0 0 0 chr17 34603492 34603514 -60669137 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 1 849 1019 105 25 25 chr17 34603514 34603671 -60668980 - B2_Mm2 SINE B2 -38 157 1 1 849 520 168 0 114 chr17 34603671 34603782 -60668869 - B2_Mm2 SINE B2 -92 103 6 1 849 326 288 12 2 chr17 34603848 34603944 -60668707 - ID4_ SINE ID -51 101 6 1 849 2111 166 19 28 chr17 34604001 34604424 -60668227 - MTC LTR MaLR -2 419 1 1 849 272 296 45 96 chr17 34604563 34604761 -60667890 - RLTR14 LTR ERV1 -13 369 182 1 849 635 287 35 0 chr17 34604986 34605160 -60667491 - ORR1D2 LTR MaLR -184 186 7 1 849 259 44 44 0 chr17 34605206 34605251 -60667400 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 1 849 376 290 110 0 chr17 34605469 34605624 -60667027 + L1M2 LINE L1 5608 5779 -518 1 849 333 0 0 0 chr17 34605657 34605694 -60666957 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 849 333 294 12 0 chr17 34606123 34606208 -60666443 + CT-rich Low_complexity Low_complexity 2 87 0 1 849 255 226 10 19 chr17 34607153 34607257 -60665394 + (CA)n Simple_repeat Simple_repeat 1 103 0 1 849 1557 223 35 58 chr17 34607453 34607882 -60664769 + MTC LTR MaLR 3 421 0 1 849 1763 218 44 8 chr17 34608512 34608901 -60663750 + MTD LTR MaLR 17 419 0 1 849 216 0 0 0 chr17 34611501 34611525 -60661126 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 849 192 40 0 0 chr17 34611529 34611554 -60661097 + (CAA)n Simple_repeat Simple_repeat 2 26 0 1 849 501 285 126 21 chr17 34611892 34612082 -60660569 + B3 SINE B2 1 210 -6 1 849 321 276 111 13 chr17 34612544 34612646 -60660005 - PB1D10 SINE Alu -25 124 11 1 849 930 124 14 0 chr17 34615033 34615178 -60657473 + B1_Mus1 SINE Alu 2 148 0 1 849 221 0 0 33 chr17 34615197 34615227 -60657424 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 849 528 155 35 18 chr17 34615277 34615448 -60657203 + (CCCTAA)n Simple_repeat Simple_repeat 2 175 0 1 849 599 167 21 0 chr17 34615468 34615564 -60657087 + ID_B1 SINE B4 118 215 -9 1 849 226 231 13 167 chr17 34615522 34615600 -60657051 + MT2B LTR ERVL 221 286 -315 1 849 386 256 116 0 chr17 34615585 34615706 -60656945 + B1_Mur1 SINE Alu 15 149 0 1 849 211 122 48 24 chr17 34615706 34615748 -60656903 + GA-rich Low_complexity Low_complexity 1 43 0 1 849 597 118 42 0 chr17 34615748 34615830 -60656821 + polypurine Low_complexity Low_complexity 4 89 0 1 849 719 78 10 0 chr17 34615830 34615933 -60656718 + (GAAA)n Simple_repeat Simple_repeat 1 104 0 1 849 597 118 42 0 chr17 34615933 34615969 -60656682 + polypurine Low_complexity Low_complexity 90 125 0 1 849 460 256 92 15 chr17 34616001 34616132 -60656519 + RSINE1 SINE B4 14 154 -11 1 849 528 315 11 5 chr17 34616208 34616393 -60656258 - B3 SINE B2 0 216 31 1 849 1461 63 21 5 chr17 34616394 34616584 -60656067 + B2_Mm2 SINE B2 3 195 0 1 849 1986 189 69 60 chr17 34616888 34616977 -60655674 - RLTR20D LTR ERVK 0 568 466 1 849 321 26 0 0 chr17 34616977 34617015 -60655636 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 849 1986 189 69 60 chr17 34617015 34617405 -60655246 - RLTR20D LTR ERVK -103 465 86 1 849 714 72 0 0 chr17 34618071 34618168 -60654483 - RLTR20D LTR ERVK -471 97 1 1 849 4865 166 54 29 chr17 34618168 34618789 -60653862 - MYSERV16_I-int LTR ERVK 0 2326 1694 1 849 2055 61 236 3 chr17 34618789 34619085 -60653566 - RLTR10B2 LTR ERVK 0 365 1 1 849 4865 201 70 56 chr17 34619085 34619933 -60652718 - MYSERV16_I-int LTR ERVK -584 2258 603 1 849 225 0 0 0 chr17 34619958 34619983 -60652668 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1 849 22 80 0 0 chr17 34619985 34620035 -60652616 + AT_rich Low_complexity Low_complexity 1 50 0 1 849 217 235 19 48 chr17 34620108 34620211 -60652440 + A-rich Low_complexity Low_complexity 2 101 0 1 849 1954 126 20 13 chr17 34620477 34620775 -60651876 - ORR1B1 LTR MaLR -50 344 45 1 849 985 121 13 0 chr17 34620812 34620969 -60651682 - L1_Mus3 LINE L1 -9 6629 6471 1 849 1509 173 94 3 chr17 34620970 34621278 -60651373 - MYSERV16_I-int LTR ERVK -1714 612 277 1 849 527 252 35 82 chr17 34621287 34621542 -60651109 - RMER3D-int LTR ERVK -1464 1378 1136 1 849 544 203 110 0 chr17 34621551 34621669 -60650982 - B1_Mus1 SINE Alu -15 133 3 1 849 3604 251 49 45 chr17 34621712 34622766 -60649885 - Lx5 LINE L1 0 7050 5992 1 849 25 31 0 0 chr17 34623130 34623162 -60649489 + AT_rich Low_complexity Low_complexity 1 32 0 1 849 310 288 54 120 chr17 34623217 34623265 -60649386 - Cheshire DNA MER1_type -2149 271 228 1 849 2284 112 3 3 chr17 34623265 34623588 -60649063 + ORR1A2 LTR MaLR 1 323 -4 1 849 310 288 54 120 chr17 34623588 34623780 -60648871 - Cheshire DNA MER1_type -2193 227 47 1 849 24 77 0 0 chr17 34623827 34623879 -60648772 + AT_rich Low_complexity Low_complexity 1 52 0 1 849 837 268 55 14 chr17 34623905 34624184 -60648467 - ORR1D2 LTR MaLR -66 293 1 2 849 276 275 0 28 chr17 34624184 34624241 -60648410 + ID_B1 SINE B4 162 216 -8 2 849 426 20 0 0 chr17 34624242 34624293 -60648358 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 2 849 436 293 45 0 chr17 34624532 34624689 -60647962 + L1M2 LINE L1 5608 5771 -529 2 849 182 115 77 0 chr17 34625180 34625232 -60647419 + CT-rich Low_complexity Low_complexity 4 59 0 2 849 383 237 6 0 chr17 34626322 34626478 -60646173 + (CATA)n Simple_repeat Simple_repeat 4 160 0 2 849 225 241 0 0 chr17 34626501 34626555 -60646096 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 849 315 250 61 20 chr17 34626721 34626819 -60645832 + B1F SINE Alu 41 142 -7 2 849 736 263 0 11 chr17 34626903 34627080 -60645571 + B3 SINE B2 27 201 -15 2 849 824 124 0 7 chr17 34627082 34627220 -60645431 + (TAGA)n Simple_repeat Simple_repeat 4 140 0 2 849 1677 217 30 58 chr17 34627329 34627760 -60644891 + MTC LTR MaLR 3 421 0 2 849 894 178 33 22 chr17 34628069 34628253 -60644398 - B2_Mm2 SINE B2 -8 187 2 2 849 997 225 243 23 chr17 34628673 34629015 -60643636 + MTD LTR MaLR 3 419 0 2 849 585 274 126 21 chr17 34631947 34632137 -60640514 + B3 SINE B2 1 210 -6 2 849 254 247 176 29 chr17 34632387 34632600 -60640051 + L2a LINE L2 2796 3039 -387 2 849 336 259 54 1 chr17 34632608 34632709 -60639942 - PB1D10 SINE Alu -25 124 12 2 849 966 117 14 0 chr17 34635112 34635257 -60637394 + B1_Mus1 SINE Alu 2 148 0 2 849 343 78 0 30 chr17 34635259 34635325 -60637326 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 2 849 549 149 35 18 chr17 34635375 34635546 -60637105 + (CCCTAA)n Simple_repeat Simple_repeat 2 175 0 2 849 599 167 21 0 chr17 34635566 34635662 -60636989 + ID_B1 SINE B4 118 215 -9 2 849 226 231 13 167 chr17 34635620 34635698 -60636953 + MT2B LTR ERVL 221 286 -315 2 849 378 264 116 0 chr17 34635683 34635804 -60636847 + B1_Mur1 SINE Alu 15 149 0 2 849 841 154 6 6 chr17 34635832 34635950 -60636701 + polypurine Low_complexity Low_complexity 2 120 0 2 849 1006 135 0 11 chr17 34635950 34636130 -60636521 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 2 849 297 0 0 0 chr17 34636131 34636164 -60636487 + (GAAA)n Simple_repeat Simple_repeat 1 33 0 2 849 841 154 6 6 chr17 34636164 34636213 -60636438 + polypurine Low_complexity Low_complexity 121 169 0 2 849 432 271 92 15 chr17 34636252 34636383 -60636268 + RSINE1 SINE B4 14 154 -11 2 849 554 304 11 5 chr17 34636459 34636644 -60636007 - B3 SINE B2 0 216 31 2 849 1446 69 21 5 chr17 34636645 34636835 -60635816 + B2_Mm2 SINE B2 3 195 0 2 849 311 205 89 13 chr17 34637037 34637116 -60635535 + MT2B LTR ERVL 1 85 -448 2 849 2013 184 80 27 chr17 34637139 34637228 -60635423 - RLTR20D LTR ERVK 0 568 466 2 849 210 71 0 0 chr17 34637228 34637256 -60635395 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 849 2013 184 80 27 chr17 34637256 34637617 -60635034 - RLTR20D LTR ERVK -103 465 95 2 849 554 63 0 12 chr17 34637621 34637701 -60634950 + (TA)n Simple_repeat Simple_repeat 1 79 0 2 849 387 0 0 0 chr17 34637701 34637743 -60634908 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 849 662 121 0 0 chr17 34638406 34638505 -60634146 - RLTR20D LTR ERVK -469 99 1 2 849 4997 174 75 35 chr17 34638505 34639939 -60632712 - MYSERV16_I-int LTR ERVK -2 2840 603 2 849 32 91 0 0 chr17 34639946 34640034 -60632617 + AT_rich Low_complexity Low_complexity 1 88 0 2 849 250 248 9 19 chr17 34640106 34640213 -60632438 + (CAAA)n Simple_repeat Simple_repeat 3 108 0 2 849 2078 112 20 0 chr17 34640478 34640772 -60631879 - ORR1B1 LTR MaLR -50 344 45 2 849 962 119 19 6 chr17 34640794 34640955 -60631696 - L1_Mus3 LINE L1 -5 6633 6471 2 849 1577 147 97 3 chr17 34640956 34641256 -60631395 - MYSERV16_I-int LTR ERVK -1714 612 285 2 849 649 245 41 45 chr17 34641267 34641511 -60631140 - RMER3D-int LTR ERVK -1464 1378 1136 2 849 476 229 110 0 chr17 34641519 34641637 -60631014 - B1_Mus1 SINE Alu -15 133 3 2 849 234 91 0 0 chr17 34641666 34641699 -60630952 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 2 849 2277 262 18 85 chr17 34641699 34642030 -60630621 - Lx5 LINE L1 0 7050 6725 2 849 799 111 17 0 chr17 34642030 34642147 -60630504 + PB1D9 SINE Alu 1 119 -1 2 849 2277 262 18 85 chr17 34642147 34642529 -60630122 - Lx5 LINE L1 -326 6724 6385 2 849 756 31 0 0 chr17 34642532 34642628 -60630023 - ORR1A1 LTR MaLR -235 111 16 2 849 366 276 45 119 chr17 34642964 34643012 -60629639 - MER58B DNA MER1_type -70 271 228 2 849 2328 103 6 3 chr17 34643012 34643334 -60629317 + ORR1A2 LTR MaLR 1 323 -4 2 849 366 276 45 119 chr17 34643334 34643528 -60629123 - MER58B DNA MER1_type -114 227 47 2 849 21 82 0 0 chr17 34643575 34643624 -60629027 + AT_rich Low_complexity Low_complexity 1 49 0 2 849 824 284 44 9 chr17 34643653 34643938 -60628713 - ORR1D2 LTR MaLR -66 293 1 2 849 380 20 20 0 chr17 34643995 34644044 -60628607 + (TAGA)n Simple_repeat Simple_repeat 2 51 0 2 849 328 302 61 18 chr17 34644261 34644426 -60628225 + L1M2 LINE L1 5608 5779 -518 2 849 200 263 0 13 chr17 34644883 34644960 -60627691 + CT-rich Low_complexity Low_complexity 1 76 0 2 849 200 235 22 7 chr17 34646022 34646159 -60626492 + (CA)n Simple_repeat Simple_repeat 2 140 0 2 849 330 283 9 0 chr17 34646172 34646278 -60626373 + (CA)n Simple_repeat Simple_repeat 2 108 0 2 849 313 268 51 10 chr17 34646444 34646542 -60626109 + B1F SINE Alu 41 142 -7 2 849 765 246 5 11 chr17 34646626 34646811 -60625840 + B3 SINE B2 27 210 -6 2 849 773 176 6 0 chr17 34646812 34646988 -60625663 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 2 849 326 270 11 0 chr17 34647242 34647331 -60625320 + GA-rich Low_complexity Low_complexity 2 91 0 2 849 533 14 29 0 chr17 34647341 34647410 -60625241 + (CAGA)n Simple_repeat Simple_repeat 2 72 0 2 849 345 312 31 0 chr17 34647895 34648023 -60624628 - RMER15 LTR ERVL -14 561 430 2 849 193 213 45 76 chr17 34648062 34648128 -60624523 + L3 LINE CR1 823 886 -3603 2 849 225 0 0 0 chr17 34648286 34648311 -60624340 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 2 849 1640 233 39 12 chr17 34648457 34648865 -60623786 + MTC LTR MaLR 3 421 0 2 849 891 150 32 53 chr17 34649169 34649359 -60623292 - B2_Mm2 SINE B2 -8 187 2 2 849 1346 236 56 41 chr17 34649776 34650187 -60622464 + MTD LTR MaLR 3 419 0 2 849 468 183 86 0 chr17 34650280 34650373 -60622278 + MTC LTR MaLR 263 363 -58 2 849 1080 92 0 0 chr17 34652946 34653087 -60619564 + B1_Mus1 SINE Alu 1 141 -7 2 849 180 0 0 0 chr17 34653087 34653107 -60619544 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 849 599 264 126 21 chr17 34653297 34653487 -60619164 + B3 SINE B2 1 210 -6 2 849 253 261 115 25 chr17 34653737 34653949 -60618702 + L2a LINE L2 2797 3038 -381 2 849 277 272 151 11 chr17 34653957 34654050 -60618601 - PB1D10 SINE Alu -25 124 19 2 849 317 159 0 31 chr17 34656451 34656548 -60616103 + (CCCTAA)n Simple_repeat Simple_repeat 5 98 0 2 849 460 235 69 9 chr17 34656562 34656582 -60616069 + B1F SINE Alu 18 140 -9 2 849 608 167 21 0 chr17 34656582 34656678 -60615973 + ID_B1 SINE B4 118 215 -9 2 849 340 274 154 0 chr17 34656699 34656816 -60615835 + B1_Mur1 SINE Alu 15 149 0 2 849 567 122 0 0 chr17 34656831 34656921 -60615730 + (GGAA)n Simple_repeat Simple_repeat 3 92 0 2 849 403 266 100 15 chr17 34656950 34657080 -60615571 + RSINE1 SINE B4 14 154 -11 2 849 518 300 19 0 chr17 34657169 34657329 -60615322 - B3 SINE B2 -23 193 31 2 849 1320 101 21 5 chr17 34657330 34657519 -60615132 + B2_Mm2 SINE B2 3 194 -1 2 849 288 274 128 0 chr17 34657716 34657818 -60614833 + MT2A LTR ERVL 1 115 -418 2 849 1969 198 73 30 chr17 34657818 34657907 -60614744 - RLTR20D LTR ERVK 0 568 466 2 849 486 0 0 0 chr17 34657907 34657961 -60614690 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 849 1969 198 73 30 chr17 34657961 34658335 -60614316 - RLTR20D LTR ERVK -103 465 86 2 849 225 0 0 0 chr17 34658336 34658361 -60614290 + (TA)n Simple_repeat Simple_repeat 1 25 0 2 849 243 0 0 0 chr17 34658361 34658387 -60614264 + (GA)n Simple_repeat Simple_repeat 2 28 0 2 849 648 161 69 16 chr17 34658844 34659038 -60613613 - MYSERV16_I-int LTR ERVK -986 1340 1049 2 849 1204 191 82 82 chr17 34659026 34659357 -60613294 - MYSERV16_I-int LTR ERVK -1393 933 603 2 849 39856 26 4 12 chr17 34659392 34664904 -60607747 - L1Md_A LINE L1 -14 5869 408 2 849 216 67 0 0 chr17 34665002 34665032 -60607619 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2 849 288 317 30 0 chr17 34665140 34665241 -60607410 - Lx7 LINE L1 -375 7321 7218 2 849 2057 116 20 0 chr17 34665361 34665655 -60606996 - ORR1B1 LTR MaLR -50 344 45 2 849 892 132 0 7 chr17 34665669 34665859 -60606792 - L1_Mus4 LINE L1 0 6636 6471 2 849 1241 147 114 4 chr17 34665860 34666106 -60606545 - MYSERV16_I-int LTR ERVK -1714 612 340 2 849 191 262 75 28 chr17 34666109 34666215 -60606436 - L3 LINE CR1 -1658 2831 2721 2 849 536 264 19 69 chr17 34666215 34666431 -60606220 - RMER3D-int LTR ERVK -1502 1340 1136 2 849 555 203 110 0 chr17 34666439 34666557 -60606094 - B1_Mus1 SINE Alu -15 133 3 2 849 4036 249 31 44 chr17 34666607 34667680 -60604971 - Lx5 LINE L1 0 7050 5992 2 849 2203 114 3 6 chr17 34668176 34668503 -60604148 + ORR1A2 LTR MaLR 2 327 0 2 849 602 246 62 17 chr17 34668889 34669067 -60603584 - ORR1D1 LTR MaLR -188 186 1 2 849 447 19 0 0 chr17 34669124 34669176 -60603475 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 2 849 465 285 42 6 chr17 34669398 34669564 -60603087 + L1M2 LINE L1 5608 5779 -518 2 849 235 214 0 28 chr17 34669956 34670028 -60602623 + CT-rich Low_complexity Low_complexity 1 70 0 2 849 369 286 19 6 chr17 34671064 34671278 -60601373 + (CA)n Simple_repeat Simple_repeat 1 216 0 2 849 225 163 0 0 chr17 34671325 34671374 -60601277 + (CATA)n Simple_repeat Simple_repeat 4 52 0 2 849 258 167 0 0 chr17 34671397 34671457 -60601194 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 849 308 202 82 41 chr17 34671613 34671711 -60600940 + B1F SINE Alu 41 142 -7 3 849 713 201 17 17 chr17 34671810 34671982 -60600669 + B3 SINE B2 39 210 -6 3 849 414 0 0 0 chr17 34671992 34672038 -60600613 + (GAAA)n Simple_repeat Simple_repeat 1 46 0 3 849 210 59 18 73 chr17 34672304 34672314 -60600337 + (CAGAGA)n Simple_repeat Simple_repeat 3 11 0 3 849 330 98 0 0 chr17 34672314 34672365 -60600286 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 849 210 59 18 73 chr17 34672365 34672409 -60600242 + (CAGAGA)n Simple_repeat Simple_repeat 6 48 0 3 849 207 189 0 0 chr17 34672432 34672469 -60600182 + GA-rich Low_complexity Low_complexity 5 41 0 3 849 249 57 0 0 chr17 34672486 34672521 -60600130 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 3 849 291 307 57 28 chr17 34673005 34673146 -60599505 - RMER15 LTR ERVL -1 574 430 3 849 226 200 36 0 chr17 34673387 34673442 -60599209 + (CAGA)n Simple_repeat Simple_repeat 4 60 0 3 849 1621 210 33 56 chr17 34673567 34673996 -60598655 + MTC LTR MaLR 3 421 0 3 849 879 161 33 22 chr17 34674308 34674492 -60598159 - B2_Mm2 SINE B2 -8 187 2 3 849 935 213 39 0 chr17 34674905 34675135 -60597516 + MTC LTR MaLR 3 241 -180 3 849 1181 213 90 1 chr17 34679880 34680215 -60592436 + ORR1B1 LTR MaLR 2 394 0 3 849 422 214 19 11 chr17 34680513 34680625 -60592026 + RLTR10A LTR ERVK 114 247 -164 3 849 328 254 17 50 chr17 34680638 34680758 -60591893 + RLTR10A LTR ERVK 296 411 0 3 849 380 189 61 40 chr17 34680777 34680876 -60591775 + RLTR10-int LTR ERVK 318 418 -1569 3 849 1328 307 32 11 chr17 34681167 34681756 -60590895 + RLTR45-int LTR ERVK 3080 3772 -3049 3 849 421 327 36 36 chr17 34681785 34682179 -60590472 + RLTR45-int LTR ERVK 3536 4055 -3526 3 849 1811 244 53 34 chr17 34682218 34683213 -60589438 + RLTR45-int LTR ERVK 6529 7040 -204 3 849 417 224 19 11 chr17 34683249 34683361 -60589290 + RLTR10A LTR ERVK 114 247 -164 3 849 305 240 27 0 chr17 34683698 34683773 -60588878 + B3 SINE B2 134 210 -6 3 849 270 211 43 22 chr17 34684144 34684236 -60588415 + L2 LINE L2 2945 3038 -381 3 849 295 256 47 0 chr17 34684260 34684346 -60588305 - PB1D10 SINE Alu -17 100 11 3 849 4242 63 0 4 chr17 34684925 34685480 -60587171 - L1Md_F2 LINE L1 -12 6570 6018 3 849 1318 74 0 45 chr17 34686536 34686735 -60585916 + B2_Mm1t SINE B2 1 190 -3 3 849 587 144 35 12 chr17 34687245 34687414 -60585237 + (CCCTAA)n Simple_repeat Simple_repeat 3 175 0 3 849 248 266 37 130 chr17 34687427 34687443 -60585208 + PB1 SINE Alu 22 119 -8 3 849 498 163 65 0 chr17 34687443 34687535 -60585116 + ID_B1 SINE B4 118 215 -9 3 849 435 244 106 0 chr17 34687545 34687668 -60584983 + B1_Mur1 SINE Alu 13 148 -1 3 849 332 94 0 19 chr17 34687685 34687739 -60584912 + (GGAA)n Simple_repeat Simple_repeat 3 55 0 3 849 328 287 92 15 chr17 34687765 34687896 -60584755 + RSINE1 SINE B4 14 154 -11 3 849 682 290 9 5 chr17 34687972 34688187 -60584464 - B3 SINE B2 0 216 1 3 849 271 229 36 12 chr17 34688345 34688429 -60584222 + MT2B LTR ERVL 4 89 -512 3 849 564 222 96 0 chr17 34688462 34688597 -60584054 - B1_Mus1 SINE Alu 0 148 1 3 849 257 0 30 0 chr17 34688624 34688657 -60583994 + (TTAG)n Simple_repeat Simple_repeat 3 36 0 3 849 4936 218 32 91 chr17 34688657 34689958 -60582693 - Lx5 LINE L1 -19 7031 5798 3 849 1167 55 0 0 chr17 34689958 34690103 -60582548 - B1_Mus1 SINE Alu -2 146 2 3 849 368 122 0 24 chr17 34690110 34690194 -60582457 - L1Md_F2 LINE L1 0 6582 6501 3 849 4936 218 32 91 chr17 34690194 34690304 -60582347 - Lx5 LINE L1 -1253 5797 5695 3 849 602 200 77 0 chr17 34690281 34690411 -60582240 - Lx5 LINE L1 -294 5583 5444 3 849 1171 237 50 19 chr17 34690411 34690740 -60581911 + MT2B LTR ERVL 98 559 -42 3 849 438 36 0 0 chr17 34690740 34690796 -60581855 + (TC)n Simple_repeat Simple_repeat 2 57 0 3 849 1171 245 45 29 chr17 34690796 34690828 -60581823 + MT2B LTR ERVL 560 591 -10 3 849 249 193 18 0 chr17 34691060 34691117 -60581534 + B2_Mm2 SINE B2 1 58 -137 3 849 313 267 47 47 chr17 34691467 34691573 -60581078 + ID_B1 SINE B4 80 185 -39 3 849 1218 82 43 11 chr17 34692024 34692210 -60580441 - B2_Mm1a SINE B2 -1 192 1 3 849 439 205 111 95 chr17 34692333 34692522 -60580129 + B3A SINE B2 1 192 -6 3 849 235 372 9 0 chr17 34693809 34693922 -60578729 - MER67B LTR ERV1 0 661 548 3 849 1139 273 39 28 chr17 34693936 34694298 -60578353 + MTEb LTR MaLR 1 366 -13 3 849 403 233 122 15 chr17 34694338 34694469 -60578182 - MER67B LTR ERV1 -222 439 295 3 849 469 248 62 0 chr17 34694520 34694649 -60578002 - MER67B LTR ERV1 -449 212 76 3 849 309 247 41 0 chr17 34695408 34695481 -60577170 + ID4 SINE ID 7 82 -1 3 849 674 263 42 0 chr17 34695487 34695677 -60576974 + ID_B1 SINE B4 24 221 -3 3 849 777 183 150 0 chr17 34695683 34695863 -60576788 + B3 SINE B2 1 207 -9 3 849 317 283 133 20 chr17 34695901 34696096 -60576555 + ID_B1 SINE B4 3 219 -5 3 849 231 277 20 60 chr17 34696518 34696602 -60576049 + ID_B1 SINE B4 129 209 -15 3 849 285 260 180 17 chr17 34696602 34696774 -60575877 + B3 SINE B2 2 201 -15 3 849 231 277 20 60 chr17 34696774 34696789 -60575862 + ID_B1 SINE B4 210 224 0 3 849 289 300 28 28 chr17 34696797 34696941 -60575710 + L1MDa LINE L1 1332 1475 -5158 3 849 249 33 0 0 chr17 34697072 34697102 -60575549 + (CGGGG)n Simple_repeat Simple_repeat 4 33 0 3 849 1527 27 27 0 chr17 34697202 34697389 -60575262 + B2_Mm1a SINE B2 2 193 0 3 849 188 95 0 67 chr17 34697390 34697435 -60575216 + A-rich Low_complexity Low_complexity 1 42 0 3 849 793 263 0 48 chr17 34697481 34697689 -60574962 - B3A SINE B2 0 198 1 3 849 211 229 0 0 chr17 34697796 34697844 -60574807 + A-rich Low_complexity Low_complexity 1 48 0 3 849 282 123 0 0 chr17 34698758 34698815 -60573836 + (A)n Simple_repeat Simple_repeat 1 57 0 3 849 227 214 179 0 chr17 34698820 34698876 -60573775 - PB1D10 SINE Alu -8 109 44 3 849 282 254 0 53 chr17 34699260 34699335 -60573316 + tRNA-Ala-GCA tRNA tRNA 1 71 -4 3 849 343 99 58 19 chr17 34699429 34699532 -60573119 + (TA)n Simple_repeat Simple_repeat 2 108 0 3 849 351 0 0 0 chr17 34699537 34699576 -60573075 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 849 686 279 6 6 chr17 34699577 34699757 -60572894 + ID_B1 SINE B4 13 192 -32 3 849 696 173 38 0 chr17 34699945 34700078 -60572573 + B1F1 SINE Alu 3 140 -9 3 849 189 155 14 40 chr17 34700084 34700158 -60572493 + (TTTG)n Simple_repeat Simple_repeat 2 73 0 3 849 407 233 90 30 chr17 34700478 34700611 -60572040 + B1F2 SINE Alu 1 141 -8 3 849 1138 43 171 0 chr17 34700636 34700781 -60571870 + B2_Mm1a SINE B2 2 160 -33 3 849 243 0 0 0 chr17 34700781 34700808 -60571843 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 3 849 1138 43 171 0 chr17 34700808 34700826 -60571825 + B2_Mm1a SINE B2 161 191 -2 3 849 519 316 17 135 chr17 34702744 34703040 -60569611 - MTE2b LTR MaLR -14 365 105 3 849 663 253 30 12 chr17 34703023 34703191 -60569460 - MTD LTR MaLR -248 171 1 3 849 524 275 28 7 chr17 34703191 34703334 -60569317 - MTEa LTR MaLR -169 210 65 3 849 402 214 0 23 chr17 34703333 34703419 -60569232 + B3 SINE B2 130 213 -3 3 849 350 233 42 53 chr17 34703454 34703549 -60569102 + RSINE1 SINE B4 3 96 -69 3 849 374 310 74 45 chr17 34703567 34703713 -60568938 + ID_B1 SINE B4 2 152 -72 3 849 652 221 28 0 chr17 34703713 34703858 -60568793 + B1_Mur3 SINE Alu 1 149 0 3 849 1165 68 0 0 chr17 34705914 34706062 -60566589 + B1_Mus1 SINE Alu 1 148 0 3 849 425 396 17 35 chr17 34706182 34706470 -60566181 + B4A SINE B4 1 283 -9 3 849 252 0 0 0 chr17 34706531 34706559 -60566092 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 849 1315 31 0 0 chr17 34706668 34706831 -60565820 - B2_Mm1a SINE B2 -30 163 1 3 849 558 43 0 0 chr17 34707489 34707558 -60565093 + (CA)n Simple_repeat Simple_repeat 1 69 0 3 849 351 245 39 0 chr17 34707703 34707805 -60564846 - MIRc SINE MIR -117 151 46 3 849 383 304 24 47 chr17 34708119 34708288 -60564363 + HAL1-2a_MD LINE L1 2344 2508 -516 3 849 890 110 12 0 chr17 34708978 34709124 -60563527 - B2_Mm2 SINE B2 -32 161 2 3 849 272 297 0 0 chr17 34709145 34709219 -60563432 - ID4_ SINE ID -8 75 2 3 849 264 293 62 76 chr17 34709980 34710124 -60562527 + RSINE1 SINE B4 21 162 -3 3 849 614 131 22 39 chr17 34710124 34710491 -60562160 + (CA)n Simple_repeat Simple_repeat 1 360 0 3 849 389 254 107 8 chr17 34711115 34711246 -60561405 + ID_B1 SINE B4 65 208 -16 3 849 363 186 0 0 chr17 34711246 34711343 -60561308 + GA-rich Low_complexity Low_complexity 1 97 0 3 849 206 322 0 0 chr17 34711417 34711476 -60561175 + CT-rich Low_complexity Low_complexity 2 60 0 3 849 913 128 14 0 chr17 34711483 34711631 -60561020 - B1_Mur4 SINE Alu 0 150 1 3 849 999 189 10 10 chr17 34711682 34711880 -60560771 + B3 SINE B2 19 216 0 3 849 1286 80 32 0 chr17 34712584 34712772 -60559879 - B2_Mm2 SINE B2 -1 194 1 3 849 581 284 94 4 chr17 34712793 34713031 -60559620 + ID_B1 SINE B4 3 272 -20 3 849 362 237 211 0 chr17 34712997 34713111 -60559540 + RSINE1 SINE B4 11 148 -17 3 849 235 256 0 23 chr17 34713147 34713235 -60559416 + (TAAA)n Simple_repeat Simple_repeat 4 89 0 3 849 676 191 0 44 chr17 34713972 34714109 -60558542 + ID_B1 SINE B4 80 210 -14 3 849 390 42 0 0 chr17 34714111 34714159 -60558492 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 849 840 238 48 14 chr17 34715469 34715678 -60556973 - B3 SINE B2 0 216 1 3 849 32 0 0 0 chr17 34715745 34715777 -60556874 + AT_rich Low_complexity Low_complexity 1 32 0 3 849 482 152 232 0 chr17 34715789 34715888 -60556763 - B3 SINE B2 -86 130 9 3 849 405 0 0 0 chr17 34715888 34715933 -60556718 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 849 545 216 33 100 chr17 34715936 34716116 -60556535 - B3A SINE B2 -4 194 27 3 849 923 121 14 7 chr17 34716141 34716283 -60556368 - B1_Mur4 SINE Alu -7 143 1 3 849 215 121 0 0 chr17 34716291 34716324 -60556327 - B3 SINE B2 -183 33 1 3 849 1254 87 0 0 chr17 34716345 34716565 -60556086 + (TTCC)n Simple_repeat Simple_repeat 1 220 0 3 849 631 273 62 9 chr17 34716565 34716776 -60555875 - ID_B1 SINE B4 0 224 3 4 849 212 303 55 92 chr17 34717071 34717180 -60555471 + MIRb SINE MIR 106 210 -58 4 849 280 305 102 0 chr17 34717377 34717495 -60555156 + B4 SINE B4 163 292 0 4 849 341 284 11 0 chr17 34718601 34718686 -60553965 + ID_B1 SINE B4 94 179 -45 4 849 371 157 202 7 chr17 34718686 34718784 -60553867 + B2_Mm1t SINE B2 2 113 -103 4 849 22 0 0 0 chr17 34720073 34720095 -60552556 + GC_rich Low_complexity Low_complexity 1 22 0 4 849 432 0 0 0 chr17 34721814 34721862 -60550789 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 849 22 0 0 0 chr17 34722104 34722126 -60550525 + GC_rich Low_complexity Low_complexity 1 22 0 4 849 753 197 20 13 chr17 34722404 34722553 -60550098 + B1_Mur4 SINE Alu 1 150 0 4 849 544 188 78 37 chr17 34722580 34722726 -60549925 + B1_Mur2 SINE Alu 6 140 -10 4 849 451 271 0 3 chr17 34723277 34723389 -60549262 + PB1D9 SINE Alu 6 115 -5 4 849 267 232 220 53 chr17 34723294 34723426 -60549225 + B4A SINE B4 106 259 -33 4 849 26 0 0 0 chr17 34724526 34724552 -60548099 + GC_rich Low_complexity Low_complexity 1 26 0 4 849 239 311 21 32 chr17 34725240 34725333 -60547318 - L2a LINE L2 -14 3412 3321 4 849 954 181 150 79 chr17 34725851 34726205 -60546446 + RMER10A LTR ERVL 20 398 0 4 849 180 0 0 0 chr17 34729086 34729106 -60543545 + (CCG)n Simple_repeat Simple_repeat 2 21 0 4 849 195 162 0 0 chr17 34729145 34729182 -60543469 + C-rich Low_complexity Low_complexity 1 37 0 4 849 189 0 0 0 chr17 34729250 34729271 -60543380 + (TC)n Simple_repeat Simple_repeat 1 21 0 4 849 202 205 0 0 chr17 34731387 34731426 -60541225 + C-rich Low_complexity Low_complexity 3 41 0 4 849 310 308 24 35 chr17 34732353 34732507 -60540144 - RSINE1 SINE B4 -7 158 1 4 850 228 122 0 0 chr17 34734370 34734411 -60538240 + (A)n Simple_repeat Simple_repeat 1 41 0 4 850 217 135 27 0 chr17 34736542 34736579 -60536072 + CT-rich Low_complexity Low_complexity 3 40 0 4 850 277 103 397 18 chr17 34736580 34736688 -60535963 - B2_Mm2 SINE B2 0 195 47 4 850 1104 154 17 0 chr17 34736720 34736895 -60535756 - B2_Mm1t SINE B2 -14 179 2 4 850 222 62 0 0 chr17 34738055 34738087 -60534564 + (TTA)n Simple_repeat Simple_repeat 2 33 0 4 850 235 288 12 0 chr17 34739493 34739547 -60533104 + polypyrimidine Low_complexity Low_complexity 28 82 0 4 850 252 0 0 0 chr17 34739547 34739575 -60533076 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 850 235 288 12 0 chr17 34739575 34739600 -60533051 + polypyrimidine Low_complexity Low_complexity 3 27 0 4 850 194 137 0 56 chr17 34740462 34740516 -60532135 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 850 477 204 105 53 chr17 34744153 34744267 -60528384 - PB1D9 SINE Alu 0 120 1 4 850 226 340 62 26 chr17 34744937 34745065 -60527586 - L2c LINE L2 -20 3367 3210 4 850 185 323 146 0 chr17 34745096 34745192 -60527459 - MER5A DNA MER1_type -20 169 60 4 850 312 248 63 0 chr17 34745194 34745291 -60527360 + ID_B1 SINE B4 67 164 -60 4 850 332 218 75 0 chr17 34745218 34745311 -60527340 + PB1D10 SINE Alu 6 107 -207 4 850 242 342 18 18 chr17 34745375 34745488 -60527163 - L2c LINE L2 -292 3095 2983 4 850 243 0 0 0 chr17 34746227 34746254 -60526397 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 850 186 71 0 0 chr17 34746296 34746324 -60526327 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 850 486 172 0 0 chr17 34746425 34746524 -60526127 + (TG)n Simple_repeat Simple_repeat 2 100 0 4 850 416 276 22 15 chr17 34746709 34746845 -60525806 - MER33 DNA MER1_type 0 324 188 4 850 222 273 18 0 chr17 34746850 34746905 -60525746 + ID SINE ID 2 57 -167 4 850 377 286 0 45 chr17 34747054 34747164 -60525487 + PB1D7 SINE Alu 9 113 -7 4 850 219 36 0 0 chr17 34747427 34747455 -60525196 + (CTG)n Simple_repeat Simple_repeat 1 28 0 4 850 234 62 0 0 chr17 34750136 34750168 -60522483 + (T)n Simple_repeat Simple_repeat 1 32 0 4 850 591 141 155 62 chr17 34754796 34754925 -60517726 + B1_Mus1 SINE Alu 5 145 -3 4 850 315 0 0 0 chr17 34754925 34754960 -60517691 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 4 850 244 206 0 87 chr17 34754975 34755044 -60517607 + B1_Mus2 SINE Alu 82 144 -3 4 850 378 0 0 0 chr17 34755044 34755086 -60517565 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 4 850 674 245 80 25 chr17 34755105 34755306 -60517345 + B3 SINE B2 5 216 0 4 850 1000 113 0 27 chr17 34755314 34755460 -60517191 + B1_Mus2 SINE Alu 3 144 -3 4 850 331 329 145 7 chr17 34755611 34755633 -60517018 + B4 SINE B4 64 104 -188 4 850 566 217 0 17 chr17 34755633 34755750 -60516901 + PB1D9 SINE Alu 1 115 -5 4 850 867 119 61 25 chr17 34755920 34756083 -60516568 + B2_Mm2 SINE B2 15 183 -12 4 850 527 204 84 112 chr17 34756258 34756478 -60516173 + B3A SINE B2 1 216 0 4 850 421 321 101 14 chr17 34756399 34756538 -60516113 + RSINE1 SINE B4 15 165 0 4 850 669 179 102 22 chr17 34756770 34756907 -60515744 - B1_Mur2 SINE Alu 0 149 2 4 850 685 158 342 0 chr17 34756933 34757091 -60515560 - B3 SINE B2 -4 212 1 4 850 230 290 152 0 chr17 34757116 34757254 -60515397 + L1MB3 LINE L1 5973 6131 -52 4 850 330 338 286 17 chr17 34757267 34757442 -60515209 + ID_B1 SINE B4 3 224 0 4 850 504 191 161 31 chr17 34757529 34757659 -60514992 + B1_Mur3 SINE Alu 1 147 -2 4 850 347 259 53 9 chr17 34757726 34757839 -60514812 - PB1D7 SINE Alu -2 118 1 4 850 376 179 25 25 chr17 34758068 34758148 -60514503 + L2a LINE L2 3344 3423 -3 4 850 1194 55 7 0 chr17 34758352 34758498 -60514153 - B1_Mus2 SINE Alu 0 147 1 4 850 823 154 65 14 chr17 34758513 34758651 -60514000 - B1_Mm SINE Alu -1 146 2 4 850 1334 107 37 0 chr17 34758800 34758987 -60513664 + B2_Mm2 SINE B2 2 195 0 4 850 524 225 265 6 chr17 34758993 34759163 -60513488 - ID_B1 SINE B4 -7 217 4 4 850 207 0 0 0 chr17 34759196 34759219 -60513432 + (CTTG)n Simple_repeat Simple_repeat 1 23 0 4 850 344 115 231 0 chr17 34759236 34759314 -60513337 - PB1D9 SINE Alu 0 120 25 4 850 442 111 0 14 chr17 34759345 34759418 -60513233 + L1_Mus2 LINE L1 6495 6566 0 4 850 251 286 39 13 chr17 34759439 34759517 -60513134 - PB1 SINE Alu -5 122 43 4 850 356 304 76 34 chr17 34759532 34759651 -60513000 + ID_B1 SINE B4 20 143 -81 4 850 674 251 22 17 chr17 34760083 34760260 -60512391 + ID_B1 SINE B4 1 183 -41 4 850 257 155 53 66 chr17 34760291 34760367 -60512284 + B2_Mm2 SINE B2 101 175 -20 4 850 626 145 50 64 chr17 34760455 34760595 -60512056 - B1_Mur2 SINE Alu 0 149 12 4 850 249 250 12 84 chr17 34760523 34760606 -60512045 - MT2B LTR ERVL -360 241 165 4 850 310 308 94 0 chr17 34760651 34760768 -60511883 - MIRb SINE MIR -54 214 87 4 850 693 144 0 0 chr17 34760981 34761113 -60511538 + (CA)n Simple_repeat Simple_repeat 1 132 0 4 850 275 192 192 0 chr17 34761139 34761217 -60511434 + RLTR13D3 LTR ERVK 1 93 -1021 4 850 1711 26 0 0 chr17 34761456 34761648 -60511003 + B2_Mm1a SINE B2 2 193 0 4 850 1190 75 0 0 chr17 34761727 34761874 -60510777 + B1_Mus1 SINE Alu 2 148 0 4 850 718 63 0 0 chr17 34761895 34761990 -60510661 - B1_Mus2 SINE Alu -52 95 1 4 850 282 331 21 48 chr17 34762168 34762355 -60510296 + RLTR13D3 LTR ERVK 890 1071 -43 4 850 1355 70 10 46 chr17 34762906 34763100 -60509551 - B2_Mm2 SINE B2 -8 187 1 4 850 25 0 0 0 chr17 34764379 34764404 -60508247 + GC_rich Low_complexity Low_complexity 1 25 0 4 850 437 276 16 57 chr17 34767056 34767179 -60505472 - PB1D7 SINE Alu 0 120 3 4 850 198 103 0 0 chr17 34767678 34767707 -60504944 + (CCA)n Simple_repeat Simple_repeat 1 29 0 4 850 292 248 162 18 chr17 34770268 34770379 -60502272 + B1_Mur1 SINE Alu 17 143 -6 4 850 378 287 0 0 chr17 34770291 34770385 -60502266 + ID_B1 SINE B4 131 224 0 4 850 605 258 42 26 chr17 34770998 34771189 -60501462 - B3A SINE B2 0 198 5 4 850 961 114 0 0 chr17 34771677 34771817 -60500834 + B1_Mus1 SINE Alu 8 147 -1 4 850 1072 52 0 36 chr17 34771842 34771982 -60500669 + B1_Mus2 SINE Alu 1 135 -12 4 850 901 103 13 6 chr17 34771983 34772140 -60500511 + (GAAA)n Simple_repeat Simple_repeat 3 160 0 4 850 561 152 54 11 chr17 34772425 34772547 -60500104 - B1_Mus2 SINE Alu -2 147 30 4 850 231 294 54 18 chr17 34772819 34772930 -60499721 + L2 LINE L2 2674 2788 -631 4 850 284 340 6 80 chr17 34772931 34772997 -60499654 + MT2B2 LTR ERVL 107 160 -424 4 850 602 186 53 0 chr17 34772997 34773110 -60499541 + B1_Mur2 SINE Alu 2 120 -29 4 850 264 297 0 13 chr17 34773270 34773345 -60499306 + PB1D10 SINE Alu 1 74 -43 4 850 346 192 53 19 chr17 34773347 34773451 -60499200 + B1_Mus1 SINE Alu 9 120 0 4 850 357 24 0 0 chr17 34773513 34773555 -60499096 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 850 243 267 53 43 chr17 34773577 34773671 -60498980 + B4A SINE B4 124 218 -74 4 850 887 118 72 14 chr17 34773918 34774056 -60498595 - B1_Mus2 SINE Alu 0 147 2 4 850 187 350 37 12 chr17 34774693 34774774 -60497877 + MER5B DNA MER1_type 94 176 -2 4 850 218 402 0 12 chr17 34775326 34775409 -60497242 - ID SINE ID -142 82 1 4 850 563 250 94 25 chr17 34775646 34775698 -60496953 - B3 SINE B2 0 216 167 5 850 303 28 0 0 chr17 34775698 34775734 -60496917 + (TCTG)n Simple_repeat Simple_repeat 3 38 0 5 850 563 250 94 25 chr17 34775734 34775882 -60496769 - B3 SINE B2 -50 166 2 5 850 468 227 17 3 chr17 34775929 34776031 -60496620 + B1F SINE Alu 3 115 -5 5 850 609 52 0 0 chr17 34776031 34776108 -60496543 + (GA)n Simple_repeat Simple_repeat 2 78 0 5 850 2232 128 41 3 chr17 34776145 34776513 -60496138 + MTC LTR MaLR 1 382 -39 5 850 350 299 9 0 chr17 34776949 34777056 -60495595 + Lx8 LINE L1 7143 7250 -223 5 850 247 329 59 86 chr17 34777220 34777264 -60495387 + B4A SINE B4 43 221 -69 5 850 739 161 0 21 chr17 34777264 34777404 -60495247 + B1_Mur1 SINE Alu 7 143 -6 5 850 656 253 179 6 chr17 34777420 34777599 -60495052 - B3 SINE B2 -6 210 1 5 850 22 0 0 0 chr17 34777601 34777623 -60495028 + AT_rich Low_complexity Low_complexity 1 22 0 5 850 283 346 0 0 chr17 34777633 34777711 -60494940 + ID4 SINE ID 2 79 -4 5 850 236 157 39 0 chr17 34778636 34778687 -60493964 + B3A SINE B2 1 53 -145 5 850 2370 162 65 20 chr17 34778729 34778754 -60493897 + RMER4A LTR ERVK 1 25 -441 5 850 222 37 0 0 chr17 34778754 34778781 -60493870 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 5 850 1389 67 11 22 chr17 34778781 34778963 -60493688 - B2_Mm2 SINE B2 -14 181 2 5 850 2370 162 65 20 chr17 34778963 34779382 -60493269 + RMER4A LTR ERVK 26 465 -1 5 850 306 239 44 57 chr17 34779385 34779488 -60493163 - B1F SINE Alu -40 108 9 5 850 293 367 73 62 chr17 34779546 34779723 -60492928 + L2a LINE L2 3205 3422 -4 5 850 198 0 0 0 chr17 34779724 34779746 -60492905 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 850 915 176 0 20 chr17 34780080 34780231 -60492420 - B1_Mur3 SINE Alu -1 148 1 5 850 344 284 12 0 chr17 34780797 34780878 -60491773 + ID_B1 SINE B4 39 120 -104 5 850 272 235 84 34 chr17 34780818 34780937 -60491714 + B1F2 SINE Alu 24 148 -1 5 850 246 232 0 42 chr17 34781482 34781554 -60491097 - ID4 SINE ID -13 70 2 5 850 210 37 0 0 chr17 34782085 34782112 -60490539 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 850 434 272 10 0 chr17 34783473 34783576 -60489075 - B3A SINE B2 -67 131 28 5 850 848 89 118 24 chr17 34783593 34783720 -60488931 - B1_Mur4 SINE Alu -9 141 3 5 850 300 160 0 0 chr17 34786237 34786293 -60486358 + B1_Mur4 SINE Alu 3 57 -92 5 850 245 208 19 0 chr17 34786246 34786299 -60486352 + ID_B1 SINE B4 92 145 -79 5 850 444 135 15 6 chr17 34786379 34786470 -60486181 + B1_Mus2 SINE Alu 31 147 0 5 850 609 177 67 30 chr17 34786530 34786664 -60485987 + B3 SINE B2 1 139 -77 5 850 357 24 0 0 chr17 34786809 34786851 -60485800 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 850 495 263 228 0 chr17 34787037 34787208 -60485443 - B3 SINE B2 -6 210 1 5 850 24 0 0 0 chr17 34791972 34791996 -60480655 + AT_rich Low_complexity Low_complexity 1 24 0 5 850 226 228 18 0 chr17 34793631 34793688 -60478963 + CT-rich Low_complexity Low_complexity 4 61 0 5 850 724 300 51 63 chr17 34794653 34795078 -60477573 - RLTR11A2 LTR ERVK -131 446 3 5 850 1367 222 56 28 chr17 34795163 34795557 -60477094 + RLTR11A2 LTR ERVK 115 519 -8 5 850 1226 78 5 5 chr17 34798882 34799089 -60473562 + (TTTC)n Simple_repeat Simple_repeat 1 206 0 5 850 350 136 30 0 chr17 34799090 34799156 -60473495 + CT-rich Low_complexity Low_complexity 1 68 0 5 850 1186 90 6 6 chr17 34799157 34799336 -60473315 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 5 850 802 50 235 0 chr17 34799340 34799459 -60473192 - B1_Mus1 SINE Alu -1 147 1 5 850 912 292 18 5 chr17 34800412 34800644 -60472007 - ID_B1 SINE B4 -44 248 9 5 850 1286 94 5 68 chr17 34801125 34801331 -60471320 + B2_Mm2 SINE B2 2 194 -1 5 850 714 291 6 0 chr17 34801366 34801524 -60471127 + RSINE1 SINE B4 3 161 -4 5 850 499 230 35 0 chr17 34801758 34801871 -60470780 - PB1D10 SINE Alu -2 118 2 5 850 254 167 0 0 chr17 34801994 34802036 -60470615 - PB1D9 SINE Alu -28 92 51 5 850 505 214 19 0 chr17 34802874 34802977 -60469674 + RSINE1 SINE B4 4 108 -57 5 850 328 306 82 50 chr17 34803257 34803383 -60469268 - L1ME3 LINE L1 -86 6087 5958 5 850 1738 26 0 0 chr17 34803383 34803576 -60469075 + B2_Mm1t SINE B2 1 193 0 5 850 328 314 77 51 chr17 34803576 34803738 -60468913 - L1ME3 LINE L1 -215 5958 5797 5 850 449 272 0 10 chr17 34803795 34803899 -60468752 + PB1D10 SINE Alu 7 109 -8 5 850 225 188 21 0 chr17 34803937 34803985 -60468666 + B3A SINE B2 18 66 -132 5 850 697 269 158 0 chr17 34804015 34804186 -60468465 - B3A SINE B2 0 198 1 5 850 447 281 52 68 chr17 34804245 34804436 -60468215 - B4A SINE B4 -22 270 83 5 850 786 199 47 47 chr17 34804755 34804945 -60467706 - B3 SINE B2 0 216 27 5 850 1229 182 4 20 chr17 34805084 34805331 -60467320 - RLTR11B LTR ERVK 0 453 211 5 850 294 158 18 0 chr17 34805313 34805370 -60467281 + RLTR11B LTR ERVK 396 453 0 5 850 58 15 0 0 chr17 34805381 34805446 -60467205 + AT_rich Low_complexity Low_complexity 1 65 0 5 850 250 167 0 0 chr17 34805464 34805506 -60467145 - B2_Mm1t SINE B2 -104 89 48 5 850 996 155 17 0 chr17 34805526 34805542 -60467109 - B2_Mm1t SINE B2 -14 179 162 5 850 243 0 0 0 chr17 34805542 34805569 -60467082 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 5 850 1084 109 0 0 chr17 34805569 34805726 -60466925 - B2_Mm2 SINE B2 -32 161 3 5 850 201 143 0 45 chr17 34805764 34805791 -60466860 + A-rich Low_complexity Low_complexity 1 26 0 5 850 1131 56 35 0 chr17 34805791 34805933 -60466718 + B1_Mus1 SINE Alu 2 148 0 5 850 201 143 0 45 chr17 34805933 34805949 -60466702 + A-rich Low_complexity Low_complexity 27 42 0 5 850 921 240 30 49 chr17 34805958 34806221 -60466430 + Lx6 LINE L1 7201 7458 -2 5 850 802 165 68 0 chr17 34806222 34806355 -60466296 + B1_Mus2 SINE Alu 5 146 -1 5 850 201 94 0 0 chr17 34806355 34806387 -60466264 + (CCAA)n Simple_repeat Simple_repeat 4 35 0 5 850 597 286 7 0 chr17 34806402 34806542 -60466109 + ID_B1 SINE B4 84 224 0 5 850 813 167 12 16 chr17 34806542 34806797 -60465854 + GA-rich Low_complexity Low_complexity 1 254 0 5 850 238 325 105 62 chr17 34807155 34807365 -60465286 - L2 LINE L2 -342 3077 2859 5 850 202 261 0 0 chr17 34807859 34807905 -60464746 + G-rich Low_complexity Low_complexity 1 46 0 5 850 333 140 0 0 chr17 34810461 34810518 -60462133 + (ATG)n Simple_repeat Simple_repeat 3 59 0 5 850 1294 111 15 31 chr17 34810565 34810761 -60461890 - B2_Mm2 SINE B2 -1 194 2 5 850 319 268 86 68 chr17 34811089 34811235 -60461416 + MT2B LTR ERVL 107 257 -327 5 850 757 146 0 23 chr17 34811149 34811282 -60461369 + B1_Mm SINE Alu 17 146 -1 5 850 304 312 116 20 chr17 34811362 34811509 -60461142 + HAL1-3A_ME LINE L1 2277 2437 -421 5 850 292 200 12 12 chr17 34811509 34811595 -60461056 + GA-rich Low_complexity Low_complexity 1 86 0 5 850 24 0 0 0 chr17 34812123 34812147 -60460504 + AT_rich Low_complexity Low_complexity 1 24 0 5 850 856 151 0 82 chr17 34814464 34814610 -60458041 + B1_Mur3 SINE Alu 3 136 -13 5 850 222 37 0 0 chr17 34814610 34814637 -60458014 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 5 850 856 151 0 82 chr17 34814637 34814649 -60458002 + B1_Mur3 SINE Alu 137 148 -1 5 850 606 233 49 11 chr17 34814671 34814838 -60457813 - B3A SINE B2 -6 192 19 5 850 320 111 0 18 chr17 34814851 34814906 -60457745 + (TTC)n Simple_repeat Simple_repeat 3 56 0 5 850 1021 99 35 0 chr17 34814919 34815061 -60457590 - B1_Mus2 SINE Alu 0 147 1 5 850 422 214 243 20 chr17 34815112 34815260 -60457391 - B3A SINE B2 -16 182 2 5 850 222 37 0 0 chr17 34817502 34817529 -60455122 + (CCA)n Simple_repeat Simple_repeat 3 29 0 5 850 307 269 39 0 chr17 34817847 34817925 -60454726 + RMER30 DNA MER1_type 1 81 -121 5 850 198 0 0 0 chr17 34818567 34818589 -60454062 + (TGGGGG)n Simple_repeat Simple_repeat 6 27 0 5 850 216 0 0 0 chr17 34818846 34818870 -60453781 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 850 261 0 0 0 chr17 34819653 34819682 -60452969 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 850 446 0 19 0 chr17 34819716 34819770 -60452881 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 850 378 0 0 0 chr17 34822205 34822247 -60450404 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 850 402 340 19 7 chr17 34823341 34823495 -60449156 + MIR SINE MIR 21 176 -86 5 850 360 176 0 29 chr17 34823547 34823617 -60449034 + PB1D10 SINE Alu 45 112 -5 5 850 7259 2 0 0 chr17 34823760 34824640 -60448011 - L1Md_A LINE L1 0 6582 5703 5 850 994 9 0 0 chr17 34824640 34824747 -60447904 - U6 snRNA snRNA 0 107 1 5 850 1544 243 49 12 chr17 34824952 34825381 -60447270 - Lx6 LINE L1 -23 7437 6993 5 850 286 254 136 34 chr17 34826830 34826977 -60445674 - RSINE1 SINE B4 -2 163 2 5 850 209 254 18 0 chr17 34827609 34827664 -60444987 + CT-rich Low_complexity Low_complexity 4 59 0 5 850 467 313 37 7 chr17 34828096 34828231 -60444420 - RSINE1 SINE B4 -4 161 23 5 850 739 249 85 73 chr17 34828256 34828503 -60444148 + B4A SINE B4 1 250 -42 5 850 405 0 0 0 chr17 34828521 34828566 -60444085 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 850 236 381 0 0 chr17 34828584 34828689 -60443962 + (CA)n Simple_repeat Simple_repeat 1 105 0 5 850 397 299 211 16 chr17 34828690 34828880 -60443771 + MER2 DNA MER2_type 79 305 -40 5 850 454 190 49 7 chr17 34831694 34831837 -60440814 + (CATATA)n Simple_repeat Simple_repeat 2 150 0 5 850 930 217 23 50 chr17 34834104 34834322 -60438329 + B3 SINE B2 1 212 -4 6 850 267 357 38 45 chr17 34834631 34834763 -60437888 + ID_B1 SINE B4 84 214 -10 6 850 459 0 0 0 chr17 34834763 34834814 -60437837 + (TAAAA)n Simple_repeat Simple_repeat 2 52 0 6 850 203 156 0 62 chr17 34835575 34835595 -60437056 + polypyrimidine Low_complexity Low_complexity 27 46 0 6 850 1374 59 42 26 chr17 34835595 34835787 -60436864 - B2_Mm2 SINE B2 0 195 1 6 850 203 156 0 62 chr17 34835787 34835814 -60436837 + polypyrimidine Low_complexity Low_complexity 2 26 0 6 850 414 261 0 0 chr17 34836311 34836487 -60436164 + (CA)n Simple_repeat Simple_repeat 2 177 0 6 850 272 321 75 83 chr17 34836517 34836758 -60435893 + ORR1D2 LTR MaLR 66 304 -66 6 850 436 318 35 25 chr17 34838103 34838306 -60434345 - L1M5 LINE L1 -353 5771 5567 6 850 522 239 45 2 chr17 34840048 34840176 -60432475 - B1_Mur1 SINE Alu -8 139 7 6 850 438 223 317 0 chr17 34841193 34841346 -60431305 - B3 SINE B2 -6 210 9 6 850 354 305 189 16 chr17 34841424 34841614 -60431037 - RMER15 LTR ERVL -14 561 339 6 850 711 216 14 0 chr17 34841780 34841919 -60430732 - B1_Mus1 SINE Alu -1 147 7 6 850 1961 257 87 53 chr17 34841968 34842009 -60430642 - RMER15-int LTR ERVL -3 4996 4956 6 850 186 43 0 0 chr17 34842009 34842032 -60430619 + (TC)n Simple_repeat Simple_repeat 1 23 0 6 850 1961 257 87 53 chr17 34842032 34842681 -60429970 - RMER15-int LTR ERVL -44 4955 4284 6 850 1356 109 16 5 chr17 34843454 34843647 -60429004 - B2_Mm2 SINE B2 0 195 1 6 850 816 312 33 13 chr17 34843665 34843970 -60428681 - RMER15-int LTR ERVL -3354 1645 1335 6 850 583 243 0 0 chr17 34843970 34844077 -60428574 - B1_Mur1 SINE Alu -24 125 19 6 850 502 304 14 7 chr17 34844089 34844228 -60428423 - RMER15-int LTR ERVL -3700 1299 1160 6 850 373 252 87 0 chr17 34844256 34844371 -60428280 - RMER15-int LTR ERVL -3900 1099 975 6 850 188 282 14 40 chr17 34844373 34844447 -60428204 + L4 LINE RTE 342 413 -1616 6 850 1020 335 85 40 chr17 34844459 34844963 -60427688 - RMER15-int LTR ERVL -4148 851 325 6 850 298 324 136 40 chr17 34845034 34845262 -60427389 - RMER15 LTR ERVL -19 556 307 6 850 988 123 7 7 chr17 34845648 34845795 -60426856 - B1_Mus2 SINE Alu 0 147 1 6 850 239 132 0 0 chr17 34849100 34849138 -60423513 - URR1B DNA MER1_type 0 225 188 6 850 942 191 16 11 chr17 34849140 34849325 -60423326 - B2_Mm2 SINE B2 -8 187 2 6 850 402 246 156 67 chr17 34849325 34849371 -60423280 - URR1B DNA MER1_type -33 192 124 6 850 871 141 6 63 chr17 34849371 34849383 -60423268 - B1_Mur4 SINE Alu 0 150 141 6 850 197 65 0 31 chr17 34849383 34849415 -60423236 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 850 871 141 6 63 chr17 34849415 34849561 -60423090 - B1_Mur4 SINE Alu -10 140 1 6 850 402 246 156 67 chr17 34849561 34849685 -60422966 - URR1B DNA MER1_type -102 123 7 6 850 436 242 11 0 chr17 34858763 34858854 -60413797 + B1_Mur1 SINE Alu 52 143 -6 6 850 335 159 0 28 chr17 34858868 34858939 -60413712 + GA-rich Low_complexity Low_complexity 1 69 0 6 850 195 42 0 0 chr17 34859159 34859183 -60413468 + (CAG)n Simple_repeat Simple_repeat 2 25 0 6 850 258 354 0 110 chr17 34859687 34859814 -60412837 - PB1 SINE Alu -4 123 11 6 850 297 310 137 37 chr17 34859887 34860048 -60412603 - B4A SINE B4 -3 289 113 6 850 745 284 5 5 chr17 34860065 34860256 -60412395 + B3 SINE B2 2 192 -24 6 850 843 10 0 0 chr17 34860362 34860458 -60412193 + (TTC)n Simple_repeat Simple_repeat 1 96 0 6 850 2754 77 207 5 chr17 34860460 34860890 -60411761 - MURVY-LTR LTR ERV1 -2 517 1 6 850 5942 273 4 35 chr17 34861121 34862752 -60409899 - MuRRS4-int LTR ERV1 -795 4268 2689 6 850 641 36 0 12 chr17 34862754 34862839 -60409812 + (TCC)n Simple_repeat Simple_repeat 2 85 0 6 850 424 254 123 0 chr17 34862852 34862982 -60409669 - B1F1 SINE Alu -2 147 2 6 850 569 246 18 0 chr17 34863029 34863139 -60409512 + PB1D10 SINE Alu 1 112 -5 6 850 249 161 79 16 chr17 34863144 34863207 -60409444 + ID4_ SINE ID 16 82 -1 6 850 216 0 0 0 chr17 34863377 34863401 -60409250 + (A)n Simple_repeat Simple_repeat 1 24 0 6 850 282 176 0 0 chr17 34864385 34864436 -60408215 + ID_B1 SINE B4 174 224 0 6 851 276 246 32 76 chr17 34868770 34868928 -60403723 + (CACCC)n Simple_repeat Simple_repeat 3 153 0 6 851 938 125 227 5 chr17 34869286 34869471 -60403180 + URR1A DNA MER1_type 1 226 0 6 851 330 310 16 49 chr17 34872076 34872198 -60400453 + PB1D7 SINE Alu 2 119 -1 6 851 229 302 0 44 chr17 34872119 34872209 -60400442 + RLTR25A LTR ERVK 522 607 -496 6 851 225 65 0 0 chr17 34873992 34874023 -60398628 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 851 3512 28 0 2 chr17 34874023 34874417 -60398234 + MTA_Mm LTR MaLR 1 393 -3 6 851 654 117 0 0 chr17 34874417 34874528 -60398123 + (CA)n Simple_repeat Simple_repeat 2 112 0 6 851 952 171 4 5 chr17 34874901 34875695 -60396956 + GA-rich Low_complexity Low_complexity 1 793 0 6 851 281 89 22 0 chr17 34875712 34875757 -60396894 + (GGA)n Simple_repeat Simple_repeat 3 48 0 6 851 489 276 126 48 chr17 34875989 34876259 -60396392 + B4A SINE B4 2 292 0 6 851 301 391 0 0 chr17 34876398 34876531 -60396120 + (CA)n Simple_repeat Simple_repeat 1 133 0 6 851 201 121 0 0 chr17 34876544 34876577 -60396074 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 851 660 295 83 32 chr17 34878252 34878529 -60394122 + B4A SINE B4 2 292 0 6 851 498 184 110 0 chr17 34878530 34878639 -60394012 + B1_Mur2 SINE Alu 23 143 -6 6 851 332 268 33 67 chr17 34880099 34880219 -60392432 + PB1D10 SINE Alu 2 117 0 6 851 428 241 0 11 chr17 34880253 34880341 -60392310 + PB1D7 SINE Alu 21 107 -13 6 851 327 154 0 0 chr17 34881033 34881098 -60391553 + (TG)n Simple_repeat Simple_repeat 2 66 0 6 851 182 116 23 0 chr17 34882424 34882467 -60390184 + (TGGGGG)n Simple_repeat Simple_repeat 3 46 0 6 851 770 249 60 0 chr17 34882560 34882745 -60389906 - B3 SINE B2 -10 206 11 6 851 954 138 14 0 chr17 34882752 34882897 -60389754 - B1_Mus2 SINE Alu 0 147 1 6 851 452 310 128 15 chr17 34882899 34883102 -60389549 - B4A SINE B4 -65 227 2 6 851 247 299 12 30 chr17 34883769 34883870 -60388781 + CT-rich Low_complexity Low_complexity 1 99 0 6 851 328 206 91 73 chr17 34884351 34884461 -60388190 + PB1D9 SINE Alu 9 120 0 6 851 331 224 122 0 chr17 34884563 34884661 -60387990 + PB1D9 SINE Alu 1 110 -10 6 851 2735 73 3 0 chr17 34884817 34885160 -60387491 - ORR1A1 LTR MaLR -2 344 1 6 851 753 190 22 0 chr17 34885226 34885363 -60387288 + B3 SINE B2 1 140 -76 6 851 5564 99 13 53 chr17 34885376 34886307 -60386344 + RLTR13D6 LTR ERVK 1 894 -8 6 851 14926 96 40 31 chr17 34886308 34888734 -60383917 + ETnERV2-int LTR ERVK 1 2446 -4960 6 851 1126 88 0 7 chr17 34888734 34888868 -60383783 + B1_Mus1 SINE Alu 2 135 -13 6 851 203 0 37 0 chr17 34888868 34888895 -60383756 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 6 851 1126 88 0 7 chr17 34888895 34888908 -60383743 + B1_Mus1 SINE Alu 136 148 0 6 851 414 57 0 0 chr17 34888909 34888962 -60383689 + (GAGAA)n Simple_repeat Simple_repeat 3 55 0 6 851 3067 56 200 9 chr17 34888962 34889392 -60383259 - RLTR1B LTR ERV1 0 512 1 6 851 67758 0 0 0 chr17 34889392 34896948 -60375703 - MMERGLN-int LTR ERV1 0 7556 1 6 851 3002 66 200 9 chr17 34896948 34897378 -60375273 - RLTR1B LTR ERV1 0 512 1 6 851 684 0 0 0 chr17 34897378 34897454 -60375197 + (GAGAA)n Simple_repeat Simple_repeat 2 77 0 6 851 4963 102 38 25 chr17 34897454 34898395 -60374256 + ETnERV2-int LTR ERVK 2576 3501 -2307 6 851 2666 197 80 117 chr17 34898402 34899254 -60373397 + ETnERV2-int LTR ERVK 4397 5216 -592 6 851 34899 66 3 13 chr17 34899256 34905292 -60367359 - L1Md_F2 LINE L1 -173 6409 444 6 851 419 167 0 0 chr17 34905293 34905359 -60367292 + ETnERV2-int LTR ERVK 5712 5777 -31 6 851 2160 96 13 6 chr17 34905377 34905691 -60366960 + RLTR13D6 LTR ERVK 1 316 -586 6 851 1274 73 6 11 chr17 34905687 34905867 -60366784 + RLTR13D6 LTR ERVK 138 316 -586 6 851 1274 73 6 11 chr17 34905863 34906043 -60366608 + RLTR13D6 LTR ERVK 138 316 -586 6 851 2465 81 3 23 chr17 34906039 34906391 -60366260 + RLTR13D6 LTR ERVK 138 482 -420 6 851 261 295 36 130 chr17 34906307 34906560 -60366091 + MER57C2 LTR ERV1 108 336 -98 6 851 214 160 39 20 chr17 34906575 34906626 -60366025 + (TTATG)n Simple_repeat Simple_repeat 5 56 0 6 851 209 192 269 0 chr17 34906677 34906729 -60365922 - MIR SINE MIR -195 67 2 6 851 2000 156 37 62 chr17 34908404 34908807 -60363844 - RLTR9C LTR ERVK 0 393 1 6 851 434 133 0 0 chr17 34908807 34908882 -60363769 - ETnERV2-int LTR ERVK -1 7405 7331 6 851 654 182 32 39 chr17 34909100 34909254 -60363397 - ETnERV2-int LTR ERVK -986 6420 6268 6 851 4072 162 27 29 chr17 34909240 34910626 -60362025 - ETnERV2-int LTR ERVK -3321 4085 2356 6 851 954 154 40 57 chr17 34911174 34911419 -60361232 - RLTR13D1 LTR ERVK -235 743 502 6 851 1939 188 32 15 chr17 34911419 34911823 -60360828 - ETnERV2-int LTR ERVK -4497 2909 2499 6 851 4156 197 29 92 chr17 34911848 34913094 -60359557 - MMETn-int LTR ERVK -3675 1169 2 6 851 1948 157 60 84 chr17 34913096 34913499 -60359152 - RLTR9C LTR ERVK 0 393 1 6 851 497 218 0 11 chr17 34914464 34914645 -60358006 + (CA)n Simple_repeat Simple_repeat 1 179 0 6 851 255 309 97 59 chr17 34914705 34914891 -60357760 + ORR1E LTR MaLR 102 294 -65 6 851 196 122 73 0 chr17 34916260 34916301 -60356350 + L2c LINE L2 3191 3234 -153 6 851 1287 34 0 0 chr17 34916714 34916861 -60355790 + B1_Mus2 SINE Alu 1 147 0 6 851 204 40 0 0 chr17 34916861 34916886 -60355765 + (A)n Simple_repeat Simple_repeat 1 25 0 6 851 347 299 0 0 chr17 34916926 34917023 -60355628 - L1M5 LINE L1 -454 5670 5574 6 851 2499 97 24 69 chr17 34918270 34918646 -60354005 - RLTR10D LTR ERVK 0 359 1 6 851 8490 61 16 0 chr17 34918646 34919749 -60352902 - IAP-d-int LTR ERVK 0 6542 5422 6 851 369 289 0 30 chr17 34919779 34919879 -60352772 - RMER15 LTR ERVL -140 435 339 6 851 712 257 0 0 chr17 34920045 34920189 -60352462 - B1_Mm SINE Alu -3 144 1 6 851 1617 275 69 62 chr17 34920236 34920281 -60352370 - RMER15-int LTR ERVL -3 4996 4951 6 851 219 69 0 0 chr17 34920281 34920310 -60352341 + (CA)n Simple_repeat Simple_repeat 1 29 0 6 851 1617 275 69 62 chr17 34920310 34920974 -60351677 - RMER15-int LTR ERVL -49 4950 4283 6 851 1477 63 16 5 chr17 34921732 34921924 -60350727 - B2_Mm2 SINE B2 0 195 2 6 851 751 317 26 13 chr17 34921955 34922259 -60350392 - RMER15-int LTR ERVL -3357 1642 1335 6 851 620 243 0 0 chr17 34922259 34922366 -60350285 - B1_Mur1 SINE Alu -24 125 19 6 851 478 297 14 7 chr17 34922378 34922517 -60350134 - RMER15-int LTR ERVL -3700 1299 1160 6 851 1244 306 131 37 chr17 34922545 34923253 -60349398 - RMER15-int LTR ERVL -3900 1099 325 6 851 275 328 119 43 chr17 34923341 34923551 -60349100 - RMER15 LTR ERVL -43 532 307 6 851 2470 38 0 269 chr17 34923581 34924080 -60348571 - RLTR10B2 LTR ERVK 0 365 1 6 851 4600 87 7 12 chr17 34924080 34925091 -60347560 - MMERVK10C-int LTR ERVK 0 7680 6646 6 851 38215 65 0 5 chr17 34925077 34927851 -60344800 - MMERVK10C-int LTR ERVK -1771 5810 3046 6 851 1684 42 0 0 chr17 34927851 34928044 -60344607 + B2_Mm1t SINE B2 1 193 0 6 851 38215 65 0 5 chr17 34928044 34930232 -60342419 - MMERVK10C-int LTR ERVK -4536 3045 870 6 851 1579 87 13 8 chr17 34930230 34930548 -60342103 - MMERVK10C-int LTR ERVK -7182 399 1 6 851 2867 52 0 99 chr17 34930548 34930953 -60341698 - RLTR10B2 LTR ERVK 0 365 1 6 851 984 122 0 7 chr17 34931321 34931462 -60341189 - B1_Mus2 SINE Alu -7 140 1 6 851 486 0 0 0 chr17 34932431 34932485 -60340166 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 851 491 233 0 64 chr17 34940682 34940792 -60331859 + B1_Mur1 SINE Alu 41 143 -6 6 851 489 127 0 0 chr17 34940803 34940882 -60331769 + (GGA)n Simple_repeat Simple_repeat 1 79 0 6 851 195 42 0 0 chr17 34941306 34941330 -60331321 + (CAG)n Simple_repeat Simple_repeat 2 25 0 6 851 480 244 61 8 chr17 34941829 34941961 -60330690 - B1F SINE Alu 0 149 11 6 851 378 302 129 38 chr17 34942034 34942212 -60330439 - B4A SINE B4 -3 289 95 6 851 765 284 5 5 chr17 34942212 34942403 -60330248 + B3 SINE B2 2 192 -24 6 851 4132 274 9 23 chr17 34942444 34943272 -60329379 - MuRRS4-int LTR ERV1 -1173 3890 3080 6 851 270 0 0 0 chr17 34943272 34943302 -60329349 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 7 851 4132 274 9 23 chr17 34943302 34943692 -60328959 - MuRRS4-int LTR ERV1 -1984 3079 2689 6 851 1382 50 0 6 chr17 34943695 34943875 -60328776 + (TTC)n Simple_repeat Simple_repeat 1 179 0 7 851 426 254 123 0 chr17 34943906 34944036 -60328615 - B1F1 SINE Alu -2 147 2 7 851 552 257 26 12 chr17 34944082 34944219 -60328432 + PB1D10 SINE Alu 2 138 -11 7 851 251 219 62 0 chr17 34944196 34944260 -60328391 + ID4_ SINE ID 16 83 0 7 851 246 350 60 0 chr17 34944394 34944494 -60328157 - MIR SINE MIR -152 110 5 7 851 213 65 0 0 chr17 34944532 34944563 -60328088 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 851 324 187 179 42 chr17 34945031 34945126 -60327525 + PB1D10 SINE Alu 10 117 0 7 851 23 0 0 0 chr17 34945126 34945149 -60327502 + AT_rich Low_complexity Low_complexity 1 23 0 7 851 498 282 9 0 chr17 34945157 34945267 -60327384 + ID_B1 SINE B4 10 120 -104 7 851 228 261 46 0 chr17 34949031 34949096 -60323555 - ID_B1 SINE B4 -34 190 123 7 851 250 258 24 88 chr17 34949465 34949635 -60323016 + (CACCC)n Simple_repeat Simple_repeat 3 161 0 7 851 211 292 48 32 chr17 34949648 34949772 -60322879 + C-rich Low_complexity Low_complexity 1 126 0 7 851 877 151 220 5 chr17 34949951 34950137 -60322514 + URR1A DNA MER1_type 1 226 0 7 851 544 276 14 14 chr17 34952721 34952868 -60319783 + B1F SINE Alu 2 148 -1 7 851 522 118 0 0 chr17 34954637 34954730 -60317921 + (CA)n Simple_repeat Simple_repeat 1 93 0 7 851 704 169 6 22 chr17 34955096 34955277 -60317374 + GA-rich Low_complexity Low_complexity 3 180 0 7 851 493 280 129 49 chr17 34955523 34955786 -60316865 + B4A SINE B4 2 285 -7 7 851 436 347 6 6 chr17 34955931 34956102 -60316549 + (CA)n Simple_repeat Simple_repeat 1 171 0 7 851 849 258 110 11 chr17 34957812 34958075 -60314576 + B4 SINE B4 2 290 -2 7 851 418 241 114 21 chr17 34958076 34958102 -60314549 + ID_B1 SINE B4 65 217 -7 7 851 511 202 105 0 chr17 34958102 34958216 -60314435 + B1_Mur2 SINE Alu 17 142 -7 7 851 346 268 33 67 chr17 34959678 34959798 -60312853 + PB1D10 SINE Alu 2 117 0 7 851 424 252 0 57 chr17 34959832 34959937 -60312714 + PB1D7 SINE Alu 21 119 -1 7 851 767 221 58 0 chr17 34962061 34962233 -60310418 - B3 SINE B2 -10 206 25 7 851 3855 61 39 2 chr17 34962239 34962728 -60309923 + LTRIS4 LTR ERV1 1 507 0 7 851 29646 99 40 34 chr17 34962731 34963422 -60309229 + MuRRS4-int LTR ERV1 5 674 -4389 7 851 441 0 0 0 chr17 34963422 34963471 -60309180 + (CCA)n Simple_repeat Simple_repeat 2 50 0 7 851 29646 99 40 34 chr17 34963471 34965366 -60307285 + MuRRS4-int LTR ERV1 675 2615 -2448 7 851 220 70 23 23 chr17 34965366 34965410 -60307241 + (CCA)n Simple_repeat Simple_repeat 2 45 0 7 851 29646 99 40 34 chr17 34965410 34966405 -60306246 + MuRRS4-int LTR ERV1 2616 3629 -1434 7 851 246 171 0 0 chr17 34966405 34966446 -60306205 - RMER19A LTR ERVK -439 298 258 7 851 29646 99 40 34 chr17 34966446 34967799 -60304852 + MuRRS4-int LTR ERV1 3630 5009 -54 7 851 4003 39 52 2 chr17 34967807 34968290 -60304361 + LTRIS4 LTR ERV1 1 507 0 7 851 961 151 7 0 chr17 34968311 34968457 -60304194 - B1_Mus2 SINE Alu 0 147 1 7 851 540 304 122 15 chr17 34968459 34968663 -60303988 - B4A SINE B4 -65 227 2 7 851 233 243 28 28 chr17 34969182 34969254 -60303397 + CT-rich Low_complexity Low_complexity 4 75 0 7 851 364 236 277 18 chr17 34969735 34969847 -60302804 + PB1D9 SINE Alu 8 148 0 7 851 363 214 122 0 chr17 34969949 34970047 -60302604 + PB1D9 SINE Alu 1 110 -10 7 851 1209 193 15 0 chr17 34970269 34970471 -60302180 + B3 SINE B2 1 205 -11 7 851 724 204 0 53 chr17 34970508 34970658 -60301993 + B1_Mus2 SINE Alu 4 145 -2 7 851 371 274 25 33 chr17 34970930 34971051 -60301600 - PB1D7 SINE Alu 0 120 1 7 851 555 312 18 48 chr17 34971316 34971484 -60301167 + RSINE1 SINE B4 3 165 0 7 851 468 297 0 0 chr17 34971487 34971598 -60301053 - PB1D9 SINE Alu -8 112 2 7 851 22 56 0 0 chr17 34971599 34971635 -60301016 + AT_rich Low_complexity Low_complexity 1 36 0 7 851 707 233 20 0 chr17 34971657 34971803 -60300848 + B1_Mur1 SINE Alu 1 149 0 7 851 343 332 98 52 chr17 34971804 34971912 -60300739 + L1MEg LINE L1 780 895 -5189 7 851 702 207 19 107 chr17 34971912 34972128 -60300523 + B3A SINE B2 1 197 -1 7 851 343 332 98 52 chr17 34972128 34972305 -60300346 + L1MEg LINE L1 896 1078 -5006 7 851 377 236 11 11 chr17 34972405 34972495 -60300156 + PB1D10 SINE Alu 23 112 -5 7 851 230 292 8 98 chr17 34972495 34972538 -60300113 + ID_B1 SINE B4 104 224 0 7 851 282 56 0 0 chr17 34973638 34973674 -60298977 + (TCC)n Simple_repeat Simple_repeat 1 36 0 7 851 189 163 0 0 chr17 34975414 34975463 -60297188 + G-rich Low_complexity Low_complexity 1 49 0 7 851 224 329 0 12 chr17 34979149 34979321 -60293330 + CT-rich Low_complexity Low_complexity 3 172 0 7 851 1013 122 7 7 chr17 34979485 34979633 -60293018 - B1_Mus1 SINE Alu 0 148 1 7 851 2672 122 113 0 chr17 34980072 34980549 -60292102 - RMER4B LTR ERVK -54 531 1 7 851 209 180 39 20 chr17 34981081 34981132 -60291519 + (TTATG)n Simple_repeat Simple_repeat 5 56 0 7 851 191 176 294 0 chr17 34981183 34981234 -60291417 - MIR SINE MIR -195 67 2 7 851 1555 57 16 0 chr17 34985413 34985605 -60287046 + B2_Mm2 SINE B2 1 195 0 7 851 680 284 52 9 chr17 34985755 34985965 -60286686 - ID_B1 SINE B4 -2 222 4 7 851 1158 170 9 35 chr17 34986161 34986393 -60286258 - URR1A DNA MER1_type 0 226 1 7 851 833 188 28 0 chr17 34986438 34986582 -60286069 - B1_Mur1 SINE Alu -1 148 1 7 851 339 136 0 0 chr17 34987014 34987073 -60285578 + (TCCCC)n Simple_repeat Simple_repeat 1 59 0 7 851 31 44 0 0 chr17 34987358 34987403 -60285248 + GC_rich Low_complexity Low_complexity 1 45 0 7 851 249 226 94 3 chr17 34988284 34988372 -60284279 - B1F SINE Alu -13 136 39 7 851 239 340 9 44 chr17 34988459 34988490 -60284161 - PB1 SINE Alu -16 111 83 7 851 243 0 0 0 chr17 34988490 34988517 -60284134 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 7 851 239 340 9 44 chr17 34988517 34988599 -60284052 - PB1 SINE Alu -45 82 2 7 851 251 274 0 87 chr17 34989697 34989801 -60282850 - PB1 SINE Alu 0 127 33 7 851 1084 95 0 0 chr17 34989856 34989993 -60282658 + B1_Mus2 SINE Alu 1 137 -10 7 851 240 59 0 0 chr17 34989993 34990027 -60282624 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 851 586 183 37 22 chr17 34990122 34990256 -60282395 + B1_Mus1 SINE Alu 10 145 -3 7 851 384 214 0 0 chr17 34990934 34991046 -60281605 + (CAGAGA)n Simple_repeat Simple_repeat 3 114 0 7 851 706 147 69 8 chr17 34991901 34992031 -60280620 + B1_Mus1 SINE Alu 8 145 -3 7 851 1171 82 0 0 chr17 34992036 34992183 -60280468 + B1_Mus1 SINE Alu 2 148 0 7 851 256 286 48 58 chr17 34995140 34995244 -60277407 - B1F SINE Alu -45 104 2 7 851 286 223 114 5 chr17 34995284 34995372 -60277279 - B1F1 SINE Alu -41 108 15 7 852 450 207 69 0 chr17 34996606 34996693 -60275958 - B1_Mus2 SINE Alu -52 95 3 7 852 312 281 0 68 chr17 34996693 34996709 -60275942 - MT2B LTR ERVL -351 250 155 7 852 784 217 185 0 chr17 34998293 34998482 -60274169 - ID_B1 SINE B4 0 224 1 7 852 217 304 75 17 chr17 35001893 35002067 -60270584 + L2 LINE L2 2898 3081 -338 1 852 237 253 84 0 chr17 35002175 35002258 -60270393 + MLT1C LTR MaLR 6 95 -372 2 852 820 146 15 0 chr17 35002260 35002397 -60270254 - B1_Mur4 SINE Alu 0 150 12 3 852 364 281 43 71 chr17 35002397 35002438 -60270213 - B4A SINE B4 -59 214 55 4 852 447 242 175 0 chr17 35002507 35002627 -60270024 + B3A SINE B2 16 156 -42 5 852 180 0 0 0 chr17 35002633 35002653 -60269998 + (CA)n Simple_repeat Simple_repeat 1 20 0 6 852 742 244 0 6 chr17 35003657 35003814 -60268837 + B3 SINE B2 3 158 -58 7 852 442 276 119 25 chr17 35003814 35004015 -60268636 + Lx7 LINE L1 5548 5767 -524 8 852 1168 83 0 0 chr17 35004015 35004160 -60268491 + B1_Mus2 SINE Alu 1 145 -2 9 852 219 36 0 0 chr17 35004185 35004213 -60268438 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 1 852 1378 81 5 11 chr17 35004213 35004400 -60268251 + B2_Mm1a SINE B2 2 187 -6 1 852 261 0 0 0 chr17 35004484 35004513 -60268138 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 852 5008 159 121 31 chr17 35004595 35005003 -60267648 - RMER12 LTR ERVK -95 1227 724 1 852 1546 58 16 0 chr17 35005003 35005191 -60267460 - B2_Mm2 SINE B2 -4 191 1 1 852 5008 159 121 31 chr17 35005191 35005554 -60267097 - RMER12 LTR ERVK -599 723 372 1 852 1379 87 16 5 chr17 35005554 35005739 -60266912 - B2_Mm2 SINE B2 -8 187 1 1 852 5008 159 121 31 chr17 35005739 35006092 -60266559 - RMER12 LTR ERVK -951 371 1 1 852 279 0 0 0 chr17 35006111 35006142 -60266509 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 852 1139 62 7 14 chr17 35006180 35006327 -60266324 - B1_Mus1 SINE Alu 0 148 3 1 852 31 26 0 0 chr17 35006337 35006375 -60266276 + AT_rich Low_complexity Low_complexity 1 38 0 1 852 207 0 0 0 chr17 35006427 35006450 -60266201 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 1 852 545 208 142 0 chr17 35006457 35006577 -60266074 - B1_Mur1 SINE Alu -7 142 6 2 852 638 221 7 35 chr17 35006590 35006735 -60265916 - ID_B1 SINE B4 0 224 84 2 852 180 208 42 0 chr17 35006741 35006789 -60265862 - MIRc SINE MIR -49 219 170 2 852 316 318 66 36 chr17 35006968 35007017 -60265634 + B4 SINE B4 33 90 -202 2 852 554 158 72 9 chr17 35007017 35007129 -60265522 + B1_Mus1 SINE Alu 1 118 -2 2 852 264 263 52 21 chr17 35007385 35007482 -60265169 + U6 snRNA snRNA 3 102 -5 2 852 276 299 68 91 chr17 35007489 35007695 -60264956 + L1MA5 LINE L1 6064 6267 -33 2 852 687 234 0 0 chr17 35007719 35008329 -60264322 + (TG)n Simple_repeat Simple_repeat 1 610 0 2 852 2921 76 42 3 chr17 35008329 35008710 -60263941 - MTA_Mm LTR MaLR 0 396 1 2 852 430 236 4 4 chr17 35008710 35008952 -60263699 + (TG)n Simple_repeat Simple_repeat 1 242 0 2 852 429 258 0 11 chr17 35008957 35009051 -60263600 + PB1D10 SINE Alu 1 93 -24 3 852 707 162 15 23 chr17 35009053 35009186 -60263465 + B1_Mm SINE Alu 15 146 -1 3 852 885 204 0 0 chr17 35009629 35009771 -60262880 + B1F2 SINE Alu 1 142 -7 3 852 211 312 0 70 chr17 35010075 35010096 -60262555 + C-rich Low_complexity Low_complexity 73 93 0 3 852 492 239 323 0 chr17 35010096 35010263 -60262388 - ID_B1 SINE B4 -3 221 1 3 852 211 312 0 70 chr17 35010263 35010341 -60262310 + C-rich Low_complexity Low_complexity 2 72 0 3 852 313 167 39 0 chr17 35010914 35010992 -60261659 + Lx4A LINE L1 6977 7057 -1 3 852 22 70 0 0 chr17 35011036 35011079 -60261572 + AT_rich Low_complexity Low_complexity 1 43 0 3 852 1541 38 44 0 chr17 35011087 35011270 -60261381 + B2_Mm1a SINE B2 1 191 -2 3 852 322 203 31 0 chr17 35011469 35011533 -60261118 + PB1D9 SINE Alu 54 119 -1 3 852 180 0 0 0 chr17 35011575 35011595 -60261056 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 4 852 233 367 0 12 chr17 35011607 35011687 -60260964 + ID4_ SINE ID 5 83 0 4 852 404 196 224 0 chr17 35011759 35011866 -60260785 + B1_Mur2 SINE Alu 2 132 -17 4 852 202 196 0 0 chr17 35011874 35011893 -60260758 + T-rich Low_complexity Low_complexity 30 48 0 4 852 1122 56 21 0 chr17 35011893 35012037 -60260614 - B1_Mm SINE Alu 0 147 1 4 852 202 196 0 0 chr17 35012037 35012063 -60260588 + T-rich Low_complexity Low_complexity 4 29 0 4 852 481 30 15 15 chr17 35012078 35012146 -60260505 + (TG)n Simple_repeat Simple_repeat 1 68 0 4 852 342 0 0 0 chr17 35012146 35012183 -60260468 + (GA)n Simple_repeat Simple_repeat 1 38 0 4 852 217 366 72 16 chr17 35012241 35012366 -60260285 - B4A SINE B4 -155 137 6 4 852 244 160 20 20 chr17 35012397 35012448 -60260203 - B1F2 SINE Alu -56 93 43 4 852 281 365 17 17 chr17 35012581 35012698 -60259953 + L2b LINE L2 3254 3370 -5 5 852 364 386 24 24 chr17 35013837 35014044 -60258607 + L1ME3 LINE L1 5680 5886 -276 5 852 775 259 74 30 chr17 35014052 35014255 -60258396 + B3 SINE B2 2 213 -3 5 852 1128 148 11 11 chr17 35014267 35014458 -60258193 + B2_Mm2 SINE B2 1 191 -4 5 852 365 200 235 0 chr17 35014536 35014651 -60258000 + RSINE1 SINE B4 2 143 -22 5 852 208 262 0 0 chr17 35014794 35014836 -60257815 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 852 646 206 0 53 chr17 35014848 35014981 -60257670 - B1_Mur1 SINE Alu -8 141 16 5 852 247 300 25 12 chr17 35015019 35015100 -60257551 + ID4_ SINE ID 1 82 -1 5 852 269 294 150 5 chr17 35015270 35015303 -60257348 + B1F SINE Alu 1 148 -1 5 852 289 232 141 35 chr17 35015303 35015388 -60257263 + ID_B1 SINE B4 130 223 -1 5 852 804 153 20 40 chr17 35015639 35015789 -60256862 - B1_Mm SINE Alu 0 147 1 6 852 470 214 117 12 chr17 35015796 35015955 -60256696 - B3A SINE B2 -10 185 11 6 852 189 237 0 0 chr17 35015965 35016003 -60256648 - MIR SINE MIR -112 150 113 6 852 1361 97 11 5 chr17 35016005 35016192 -60256459 + B2_Mm2 SINE B2 4 191 -4 6 852 259 258 93 35 chr17 35016423 35016539 -60256112 + B1F SINE Alu 12 142 -7 6 852 320 195 60 12 chr17 35017255 35017338 -60255313 + PB1 SINE Alu 33 119 -8 6 852 1137 118 0 16 chr17 35017621 35017811 -60254840 + B2_Mm2 SINE B2 9 195 0 6 852 186 43 0 0 chr17 35017813 35017836 -60254815 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 852 240 111 0 0 chr17 35018038 35018083 -60254568 + (A)n Simple_repeat Simple_repeat 1 45 0 6 852 529 184 93 22 chr17 35018182 35018321 -60254330 - B1F2 SINE Alu 0 149 1 6 852 325 48 0 0 chr17 35018332 35018374 -60254277 - HAL1-3A_ME LINE L1 -838 2020 1979 7 852 480 48 0 0 chr17 35018374 35018437 -60254214 + (TC)n Simple_repeat Simple_repeat 2 64 0 7 852 180 0 0 0 chr17 35019015 35019035 -60253616 + (CTCG)n Simple_repeat Simple_repeat 3 22 0 7 852 216 0 0 0 chr17 35019139 35019163 -60253488 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 852 413 322 17 0 chr17 35019612 35019727 -60252924 - ID_B1 SINE B4 0 224 108 7 852 322 328 66 44 chr17 35019727 35019747 -60252904 - B1F2 SINE Alu -3 144 7 7 852 270 0 0 0 chr17 35019768 35019798 -60252853 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 7 852 408 197 27 17 chr17 35019800 35019902 -60252749 - B1_Mur2 SINE Alu -8 141 8 7 852 396 0 0 0 chr17 35020074 35020118 -60252533 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 852 852 247 56 36 chr17 35020125 35020377 -60252274 - B4 SINE B4 -35 257 1 7 852 397 269 29 0 chr17 35020379 35020483 -60252168 - ID_B1 SINE B4 -5 219 113 8 852 439 291 45 0 chr17 35021414 35021524 -60251127 + PB1D10 SINE Alu 1 115 -34 8 852 248 224 100 55 chr17 35021986 35022109 -60250542 - B1F SINE Alu -15 134 2 8 852 365 300 125 0 chr17 35022109 35022175 -60250476 - ID SINE ID -141 83 3 8 852 671 212 87 7 chr17 35022199 35022337 -60250314 - B1_Mur1 SINE Alu 0 149 1 8 852 770 176 13 53 chr17 35022376 35022526 -60250125 + B1_Mur1 SINE Alu 5 148 -1 8 852 455 256 66 22 chr17 35022768 35022896 -60249755 + ID_B1 SINE B4 77 213 -11 8 852 180 0 0 0 chr17 35022896 35022916 -60249735 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 8 852 408 268 68 50 chr17 35022949 35023110 -60249541 + RSINE1 SINE B4 2 165 0 8 852 202 259 11 11 chr17 35023176 35023251 -60249400 + (CA)n Simple_repeat Simple_repeat 1 76 0 8 852 4547 92 124 0 chr17 35023251 35023905 -60248746 + RMER19A LTR ERVK 3 737 0 8 852 202 259 11 11 chr17 35023905 35023919 -60248732 + (CA)n Simple_repeat Simple_repeat 1 14 0 9 852 541 175 12 0 chr17 35024077 35024248 -60248403 + (TG)n Simple_repeat Simple_repeat 2 174 0 9 852 4370 34 14 0 chr17 35024365 35024865 -60247786 - LTRIS4 LTR ERV1 0 507 1 9 852 442 241 64 9 chr17 35024947 35025056 -60247595 + B1F2 SINE Alu 34 148 -1 9 852 980 157 0 0 chr17 35025221 35025368 -60247283 - B1_Mm SINE Alu 0 147 1 9 852 26 0 0 0 chr17 35025558 35025584 -60247067 + AT_rich Low_complexity Low_complexity 1 26 0 9 852 496 181 164 10 chr17 35025585 35025780 -60246871 - Lx9 LINE L1 -1 7643 7419 9 852 255 103 0 0 chr17 35025780 35025819 -60246832 + (TA)n Simple_repeat Simple_repeat 1 39 0 9 852 3197 184 55 31 chr17 35025826 35026539 -60246112 - Lx9 LINE L1 -127 7517 6788 9 852 275 0 78 20 chr17 35026539 35026590 -60246061 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 9 852 1131 58 14 0 chr17 35026592 35026731 -60245920 - B1_Mus2 SINE Alu -6 141 1 1 852 337 271 0 14 chr17 35026767 35026838 -60245813 - L1MEg LINE L1 -4133 1951 1882 1 852 440 216 83 33 chr17 35026859 35026979 -60245672 - RSINE1 SINE B4 -24 141 16 1 852 742 264 0 32 chr17 35027046 35027228 -60245423 - B3 SINE B2 -1 215 40 1 852 359 149 15 0 chr17 35027228 35027295 -60245356 + B1_Mus2 SINE Alu 1 68 -79 1 852 2185 143 88 25 chr17 35027304 35027735 -60244916 - RMER6B LTR ERVK -3 458 1 1 852 537 115 143 103 chr17 35028186 35028312 -60244339 + RMER6B LTR ERVK 6 136 -325 1 852 269 246 179 41 chr17 35028265 35028388 -60244263 + B1_Mur3 SINE Alu 9 148 -1 1 852 481 260 12 14 chr17 35028433 35028581 -60244070 - B3A SINE B2 -5 211 65 1 852 386 58 0 0 chr17 35028592 35028644 -60244007 + B2_Mm2 SINE B2 1 52 -143 1 852 252 86 0 0 chr17 35028644 35028679 -60243972 + (GAAA)n Simple_repeat Simple_repeat 3 37 0 1 852 809 133 43 29 chr17 35028719 35028858 -60243793 - B1_Mur1 SINE Alu -8 141 1 1 852 764 77 102 8 chr17 35028896 35029014 -60243637 - B1_Mus1 SINE Alu -8 140 12 1 852 344 147 109 136 chr17 35028923 35029033 -60243618 - MT2B LTR ERVL -337 264 158 1 852 781 241 13 76 chr17 35029106 35029330 -60243321 - B3 SINE B2 -6 210 1 1 852 1031 58 0 0 chr17 35029362 35029499 -60243152 + B1_Mm SINE Alu 9 145 -2 1 852 183 114 0 0 chr17 35029504 35029539 -60243112 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 852 515 195 24 63 chr17 35029617 35029743 -60242908 + B1_Mus1 SINE Alu 7 127 -21 1 852 222 174 0 0 chr17 35029743 35029789 -60242862 + GA-rich Low_complexity Low_complexity 3 48 0 1 852 22 35 0 0 chr17 35029824 35029853 -60242798 + AT_rich Low_complexity Low_complexity 1 29 0 1 852 195 346 51 36 chr17 35029928 35030066 -60242585 - MIRb SINE MIR -101 167 28 1 852 203 195 22 79 chr17 35031177 35031266 -60241385 + G-rich Low_complexity Low_complexity 2 85 0 1 852 23 105 0 0 chr17 35031548 35031634 -60241017 + GC_rich Low_complexity Low_complexity 1 86 0 1 852 29 28 0 0 chr17 35035399 35035435 -60237216 + GC_rich Low_complexity Low_complexity 1 36 0 1 852 207 146 0 0 chr17 35035437 35035478 -60237173 + (CGG)n Simple_repeat Simple_repeat 3 43 0 1 852 21 0 0 0 chr17 35035517 35035538 -60237113 + GC_rich Low_complexity Low_complexity 1 21 0 1 852 27 29 0 0 chr17 35035856 35035890 -60236761 + GC_rich Low_complexity Low_complexity 1 34 0 1 852 44 46 0 0 chr17 35035950 35036015 -60236636 + GC_rich Low_complexity Low_complexity 1 65 0 1 852 266 229 0 0 chr17 35036912 35036982 -60235669 + T-rich Low_complexity Low_complexity 1 70 0 1 852 306 50 0 0 chr17 35037265 35037305 -60235346 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 1 852 279 0 0 0 chr17 35037404 35037435 -60235216 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 852 219 211 12 50 chr17 35037519 35037599 -60235052 + T-rich Low_complexity Low_complexity 5 81 0 1 852 594 216 56 0 chr17 35037604 35037729 -60234922 - B1_Mur1 SINE Alu -3 146 15 1 852 1468 63 0 31 chr17 35037748 35037944 -60234707 - B2_Mm2 SINE B2 -4 191 2 1 852 180 111 0 0 chr17 35038024 35038051 -60234600 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1 852 634 260 62 39 chr17 35038057 35038265 -60234386 - B3 SINE B2 0 216 4 1 852 754 159 0 181 chr17 35038537 35038714 -60233937 + B1_Mus1 SINE Alu 2 146 -2 1 852 354 277 34 43 chr17 35038768 35038885 -60233766 - RSINE1 SINE B4 -46 119 4 1 852 25 0 0 0 chr17 35038894 35038919 -60233732 + AT_rich Low_complexity Low_complexity 1 25 0 1 852 1267 48 0 0 chr17 35038919 35039066 -60233585 - B1_Mus2 SINE Alu 0 147 1 1 852 1310 62 96 0 chr17 35039099 35039276 -60233375 - B2_Mm2 SINE B2 0 195 2 1 852 233 29 29 0 chr17 35039286 35039320 -60233331 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 852 368 73 0 35 chr17 35039342 35039399 -60233252 - B2_Mm2 SINE B2 -94 101 47 1 852 1170 122 0 0 chr17 35039455 35039627 -60233024 - B2_Mm2 SINE B2 -23 172 1 1 852 291 194 24 0 chr17 35039708 35039785 -60232866 - L1MB3 LINE L1 -274 5897 5814 1 852 490 182 78 52 chr17 35039796 35039912 -60232739 - PB1D9 SINE Alu 0 120 2 1 852 543 216 27 0 chr17 35040619 35040730 -60231921 - PB1D9 SINE Alu 0 120 7 1 852 272 208 153 36 chr17 35040975 35041086 -60231565 - B1_Mur3 SINE Alu -9 140 17 1 852 323 134 13 20 chr17 35041125 35041233 -60231418 - B2_Mm2 SINE B2 -3 192 47 1 852 1357 79 11 6 chr17 35041280 35041458 -60231193 - B2_Mm1t SINE B2 -14 179 1 1 852 246 241 60 0 chr17 35041462 35041525 -60231126 - B1F2 SINE Alu -45 72 4 1 852 392 183 12 24 chr17 35041665 35041749 -60230902 + PB1D9 SINE Alu 37 119 -1 1 852 555 107 0 0 chr17 35042106 35042190 -60230461 + (GGA)n Simple_repeat Simple_repeat 2 85 0 1 852 449 283 94 0 chr17 35045885 35046023 -60226628 + RSINE1 SINE B4 5 155 -10 1 852 580 248 20 46 chr17 35046040 35046192 -60226459 + B1_Mur1 SINE Alu 2 149 0 1 852 1063 76 21 7 chr17 35046197 35046342 -60226309 + B1_Mus1 SINE Alu 1 147 -1 1 852 244 327 69 0 chr17 35046628 35046729 -60225922 + RSINE1 SINE B4 58 165 0 1 852 331 250 44 44 chr17 35046742 35046855 -60225796 + PB1D9 SINE Alu 2 114 -6 1 852 1208 55 0 0 chr17 35046866 35047011 -60225640 + B1_Mm SINE Alu 2 146 -1 1 852 322 339 33 0 chr17 35047071 35047192 -60225459 + PB1 SINE Alu 1 125 -2 1 852 437 296 23 0 chr17 35047213 35047345 -60225306 + ID_B1 SINE B4 87 221 -3 1 852 221 337 0 57 chr17 35047357 35047445 -60225206 + ID4 SINE ID 1 83 0 1 852 333 0 0 0 chr17 35049095 35049132 -60223519 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 852 204 40 0 0 chr17 35049793 35049818 -60222833 + (T)n Simple_repeat Simple_repeat 1 25 0 1 852 1185 64 0 0 chr17 35049823 35049964 -60222687 - B1_Mus2 SINE Alu -6 141 1 1 852 423 229 72 18 chr17 35050013 35050124 -60222527 + PB1D10 SINE Alu 1 117 0 1 852 510 263 21 35 chr17 35050140 35050282 -60222369 + B1F1 SINE Alu 10 149 0 1 852 341 249 44 121 chr17 35053031 35053237 -60219414 + MT2B2 LTR ERVL 67 256 -328 1 852 791 175 7 0 chr17 35053139 35053282 -60219369 + B1_Mur3 SINE Alu 6 149 0 1 852 278 338 0 0 chr17 35053311 35053391 -60219260 + ID4 SINE ID 3 82 -1 1 852 189 0 0 0 chr17 35053832 35053853 -60218798 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 852 833 153 19 71 chr17 35053953 35054108 -60218543 + B1_Mus1 SINE Alu 2 148 0 1 852 303 185 0 0 chr17 35054728 35054782 -60217869 + MIRc SINE MIR 86 139 -129 1 852 312 321 68 19 chr17 35055560 35055722 -60216929 - HAL1-2a_MD LINE L1 -496 2528 2359 1 852 361 255 9 36 chr17 35056140 35056250 -60216401 + PB1D10 SINE Alu 11 117 0 1 852 345 250 120 8 chr17 35056273 35056398 -60216253 + RSINE1 SINE B4 26 164 -1 1 852 575 250 98 5 chr17 35056549 35056742 -60215909 + B3 SINE B2 1 211 -5 1 852 658 163 0 104 chr17 35056742 35056886 -60215765 + B1_Mur1 SINE Alu 21 149 0 1 852 378 248 55 37 chr17 35057046 35057155 -60215496 - PB1D7 SINE Alu 0 120 10 1 852 1126 138 21 5 chr17 35057447 35057636 -60215015 + B2_Mm1t SINE B2 2 193 0 1 852 249 33 0 0 chr17 35059028 35059058 -60213593 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 852 769 185 0 7 chr17 35059083 35059219 -60213432 - B1_Mur4 SINE Alu -10 140 6 1 852 846 186 112 15 chr17 35059296 35059493 -60213158 - B3 SINE B2 0 216 1 1 852 180 0 0 0 chr17 35059498 35059518 -60213133 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1 852 304 299 11 22 chr17 35059518 35059607 -60213044 - ID_B1 SINE B4 -11 213 126 1 852 611 270 69 6 chr17 35059617 35059792 -60212859 - ID_B1 SINE B4 -11 213 28 1 852 330 319 21 0 chr17 35059821 35059915 -60212736 - B1F SINE Alu -51 98 3 1 852 399 206 67 101 chr17 35061285 35061404 -60211247 + ID_B1 SINE B4 110 224 0 1 852 312 286 24 12 chr17 35061427 35061512 -60211139 + PB1D10 SINE Alu 26 111 -6 1 852 218 280 0 0 chr17 35061862 35061912 -60210739 - ID4 SINE ID -33 50 1 1 852 1393 73 21 0 chr17 35061935 35062126 -60210525 + B2_Mm2 SINE B2 1 195 0 1 852 660 101 0 0 chr17 35062147 35062246 -60210405 + B1_Mus2 SINE Alu 49 147 0 1 852 23 54 0 0 chr17 35062277 35062314 -60210337 + AT_rich Low_complexity Low_complexity 1 37 0 1 852 821 249 5 16 chr17 35062325 35062509 -60210142 - B3 SINE B2 -1 215 34 1 852 310 42 0 40 chr17 35062538 35062588 -60210063 + (TTTC)n Simple_repeat Simple_repeat 1 48 0 1 852 428 291 3 11 chr17 35062588 35062694 -60209957 - B1F SINE Alu -21 129 22 1 852 2284 86 29 0 chr17 35062695 35063010 -60209641 - ORR1A2 LTR MaLR 0 327 4 1 852 1319 51 84 0 chr17 35063094 35063272 -60209379 - B2_Mm2 SINE B2 0 195 3 1 852 686 217 14 0 chr17 35063316 35063459 -60209192 - ID_B1 SINE B4 0 224 80 1 852 675 157 74 8 chr17 35063509 35063631 -60209020 - B3 SINE B2 -86 130 1 1 852 275 204 0 0 chr17 35063651 35063705 -60208946 - ID SINE ID -170 54 1 1 852 536 209 24 8 chr17 35063913 35064299 -60208352 + (CA)n Simple_repeat Simple_repeat 1 392 0 2 852 417 219 67 0 chr17 35066300 35066405 -60206246 - B1F SINE Alu -11 138 27 2 852 373 323 53 0 chr17 35066568 35066701 -60205950 - B1_Mur1 SINE Alu 0 149 10 2 852 248 330 29 29 chr17 35066701 35066804 -60205847 - PB1D10 SINE Alu -7 110 8 2 852 24 0 0 0 chr17 35067339 35067363 -60205288 + AT_rich Low_complexity Low_complexity 1 24 0 2 852 506 245 99 19 chr17 35067425 35067587 -60205064 + ID_B1 SINE B4 1 175 -49 2 852 562 118 0 12 chr17 35067573 35067659 -60204992 - B1_Mus2 SINE Alu -3 144 60 2 852 707 127 16 48 chr17 35067710 35067834 -60204817 - PB1D9 SINE Alu 0 120 1 2 852 674 238 43 6 chr17 35067835 35067996 -60204655 - Lx8 LINE L1 -130 7343 7177 2 852 215 279 0 105 chr17 35067996 35068072 -60204579 - ID SINE ID -154 70 3 2 852 372 228 76 0 chr17 35070221 35070313 -60202338 + B1F1 SINE Alu 43 141 -8 2 852 397 189 121 11 chr17 35070358 35070449 -60202202 + B1_Mus2 SINE Alu 32 132 -15 2 852 288 312 11 11 chr17 35070447 35070541 -60202110 + ID_B1 SINE B4 93 186 -38 2 852 220 298 0 77 chr17 35070578 35070669 -60201982 - BC1_Mm scRNA scRNA -56 96 13 2 852 476 130 146 18 chr17 35070700 35070810 -60201841 - B1F SINE Alu -8 141 18 2 852 409 227 84 93 chr17 35070810 35070908 -60201743 - ID_B1 SINE B4 -2 211 11 2 852 270 246 0 0 chr17 35072631 35072688 -60199963 + tRNA-Ala-GCY_ tRNA tRNA 4 60 -15 2 852 528 244 15 7 chr17 35072721 35072857 -60199794 - RSINE1 SINE B4 -28 137 1 2 852 28 29 0 0 chr17 35072858 35072893 -60199758 + AT_rich Low_complexity Low_complexity 1 35 0 2 852 244 239 0 62 chr17 35073134 35073326 -60199325 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 852 576 256 29 0 chr17 35073385 35073522 -60199129 - B1F1 SINE Alu -8 141 1 2 852 217 250 147 0 chr17 35073542 35073610 -60199041 - PB1 SINE Alu -3 124 47 2 852 250 253 13 39 chr17 35073675 35073753 -60198898 - PB1D10 SINE Alu -9 108 33 2 852 414 0 0 0 chr17 35073801 35073847 -60198804 + (GTTTG)n Simple_repeat Simple_repeat 2 47 0 2 852 656 165 26 0 chr17 35073919 35074034 -60198617 + B3 SINE B2 94 211 -5 2 852 1004 103 7 20 chr17 35074102 35074251 -60198400 - B1_Mus2 SINE Alu 0 147 1 2 852 369 0 0 0 chr17 35074702 35074743 -60197908 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 852 207 0 0 0 chr17 35074743 35074765 -60197886 + (GA)n Simple_repeat Simple_repeat 2 24 0 2 852 525 259 189 0 chr17 35074767 35074871 -60197780 + B3 SINE B2 47 154 -62 2 852 222 37 0 0 chr17 35074871 35074898 -60197753 + (CATA)n Simple_repeat Simple_repeat 4 30 0 2 852 525 259 189 0 chr17 35074898 35074936 -60197715 + B3 SINE B2 155 215 -1 2 852 256 235 59 0 chr17 35075207 35075275 -60197376 + ID4_ SINE ID 3 74 -9 2 852 240 277 47 24 chr17 35075413 35075498 -60197153 - PB1 SINE Alu -20 107 21 2 852 542 250 57 7 chr17 35075525 35075666 -60196985 + RSINE1 SINE B4 9 156 -9 2 852 489 285 7 28 chr17 35075738 35075879 -60196772 + B1F2 SINE Alu 11 148 -1 2 852 1397 73 16 10 chr17 35075883 35076077 -60196574 + B2_Mm2 SINE B2 1 195 0 2 852 259 339 0 18 chr17 35076108 35076219 -60196432 + (CA)n Simple_repeat Simple_repeat 2 110 0 2 852 282 257 0 51 chr17 35076481 35076559 -60196092 - ID4 SINE ID -8 75 2 2 852 668 251 78 53 chr17 35076645 35076851 -60195800 + B3 SINE B2 6 216 0 2 852 401 263 32 0 chr17 35076871 35076966 -60195685 + B4A SINE B4 2 99 -193 2 852 948 110 0 0 chr17 35076966 35077102 -60195549 + B1_Mus1 SINE Alu 1 136 -12 2 852 2684 54 59 3 chr17 35077102 35077475 -60195176 - MTB LTR MaLR -4 396 3 2 852 292 251 0 3 chr17 35077538 35077608 -60195043 - B3 SINE B2 -102 93 25 2 852 992 219 0 57 chr17 35077650 35077691 -60194960 + B3 SINE B2 1 41 -175 2 852 1402 150 183 11 chr17 35077691 35078041 -60194610 - RMER17C LTR ERVK 0 410 1 2 852 992 219 0 57 chr17 35078041 35078227 -60194424 + B3 SINE B2 42 215 -1 2 852 222 22 42 62 chr17 35078239 35078287 -60194364 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 852 192 40 0 0 chr17 35078323 35078348 -60194303 + (T)n Simple_repeat Simple_repeat 1 25 0 2 852 251 254 15 15 chr17 35078880 35078948 -60193703 + G-rich Low_complexity Low_complexity 3 70 0 2 852 234 91 0 0 chr17 35079087 35079120 -60193531 + (TTTC)n Simple_repeat Simple_repeat 3 35 0 2 852 1092 99 0 0 chr17 35079166 35079318 -60193333 + B2_Mm2 SINE B2 1 152 -43 2 852 436 77 0 52 chr17 35079318 35079414 -60193237 + (TA)n Simple_repeat Simple_repeat 2 92 0 2 852 214 269 0 37 chr17 35079421 35079475 -60193176 - B1F1 SINE Alu -45 104 53 2 852 1079 66 0 0 chr17 35079493 35079629 -60193022 - B1_Mus2 SINE Alu -10 137 2 2 852 286 231 57 0 chr17 35079743 35079838 -60192813 - B1F SINE Alu -3 146 47 2 852 1089 109 6 33 chr17 35080482 35080663 -60191988 + B2_Mm2 SINE B2 1 176 -19 2 852 275 236 93 16 chr17 35080932 35081061 -60191590 - Lx8 LINE L1 -2 7471 7333 2 852 1009 76 27 14 chr17 35081061 35081207 -60191444 - B1_Mus1 SINE Alu 0 148 1 2 852 598 240 60 0 chr17 35081239 35081389 -60191262 + RSINE1 SINE B4 3 161 -4 2 852 333 273 0 0 chr17 35081397 35081474 -60191177 - Lx8 LINE L1 -243 7230 7154 2 852 617 213 29 7 chr17 35081699 35081836 -60190815 - B1F SINE Alu -9 140 1 2 852 372 239 34 84 chr17 35082001 35082091 -60190560 + ID_B1 SINE B4 86 169 -55 2 852 622 236 60 87 chr17 35082091 35082256 -60190395 + B3 SINE B2 1 171 -45 2 852 216 0 0 0 chr17 35082256 35082280 -60190371 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 852 622 236 60 87 chr17 35082280 35082332 -60190319 + B3 SINE B2 172 212 -4 2 852 1278 92 0 26 chr17 35082482 35082672 -60189979 + B2_Mm2 SINE B2 2 186 -9 2 852 1168 68 0 0 chr17 35083359 35083506 -60189145 + B1_Mus2 SINE Alu 1 147 0 2 852 207 88 0 0 chr17 35083506 35083540 -60189111 + (A)n Simple_repeat Simple_repeat 1 34 0 2 852 755 238 25 0 chr17 35083547 35083707 -60188944 - ID_B1 SINE B4 -53 171 8 2 852 239 98 24 0 chr17 35083707 35083748 -60188903 - MT2A LTR ERVL 0 533 492 2 852 315 71 0 0 chr17 35083760 35083802 -60188849 + (TATG)n Simple_repeat Simple_repeat 2 43 0 2 852 252 0 0 0 chr17 35084061 35084089 -60188562 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 852 1013 156 94 0 chr17 35084232 35084424 -60188227 - B3 SINE B2 -6 210 1 2 852 347 0 23 0 chr17 35084436 35084479 -60188172 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2 852 898 127 15 0 chr17 35084482 35084616 -60188035 - B1_Mur4 SINE Alu -13 137 2 2 852 452 238 197 0 chr17 35084687 35084834 -60187817 + B3 SINE B2 31 206 -10 2 852 228 135 0 0 chr17 35084871 35084908 -60187743 - B1_Mur1 SINE Alu -2 147 111 2 852 737 74 0 196 chr17 35084969 35085137 -60187514 - B1_Mus1 SINE Alu -13 135 1 2 852 305 138 119 30 chr17 35085225 35085292 -60187359 - B3 SINE B2 0 216 144 2 852 321 262 0 0 chr17 35085254 35085334 -60187317 + B3 SINE B2 132 211 -5 2 852 21 0 0 0 chr17 35085336 35085357 -60187294 + AT_rich Low_complexity Low_complexity 1 21 0 2 852 319 231 0 0 chr17 35085458 35085523 -60187128 - Lx8 LINE L1 -360 7113 7049 2 852 378 266 168 0 chr17 35085537 35085680 -60186971 - ID_B1 SINE B4 0 224 58 2 852 254 226 235 12 chr17 35085693 35085778 -60186873 - PB1D7 SINE Alu -7 113 10 2 852 539 225 67 0 chr17 35085867 35085987 -60186664 - B1_Mur4 SINE Alu -21 129 2 2 852 1623 16 5 0 chr17 35086101 35086292 -60186359 + B2_Mm1a SINE B2 2 193 0 2 852 468 164 279 48 chr17 35086319 35086332 -60186319 - B2_Mm2 SINE B2 0 195 183 2 852 1054 77 21 0 chr17 35086332 35086475 -60186176 - B1_Mus2 SINE Alu 0 147 2 2 852 468 164 279 48 chr17 35086475 35086608 -60186043 - B2_Mm2 SINE B2 -13 182 15 2 852 232 154 295 0 chr17 35086665 35086743 -60185908 - ID_B1 SINE B4 -21 203 103 2 852 646 86 95 0 chr17 35088146 35088251 -60184400 + B2_Mm2 SINE B2 81 195 0 2 852 410 228 70 9 chr17 35088390 35088505 -60184146 + URR1B DNA MER1_type 104 225 0 2 852 314 163 248 0 chr17 35088679 35088769 -60183882 + PB1D9 SINE Alu 2 111 -9 2 852 201 182 0 0 chr17 35089603 35089636 -60183015 + A-rich Low_complexity Low_complexity 1 33 0 2 852 201 74 0 0 chr17 35089830 35089857 -60182794 + (A)n Simple_repeat Simple_repeat 1 27 0 2 852 748 193 26 7 chr17 35089863 35090014 -60182637 - B2_Mm2 SINE B2 -41 154 1 2 852 279 0 0 0 chr17 35090130 35090161 -60182490 + (GA)n Simple_repeat Simple_repeat 1 31 0 2 852 905 143 14 0 chr17 35090175 35090315 -60182336 - B1_Mur4 SINE Alu -8 142 1 2 852 544 200 0 9 chr17 35090358 35090464 -60182187 - B3A SINE B2 -93 105 1 2 852 551 225 0 48 chr17 35090599 35090725 -60181926 + PB1D9 SINE Alu 1 120 0 2 852 1187 41 7 0 chr17 35090749 35090896 -60181755 + B1_Mus1 SINE Alu 1 148 0 2 852 206 32 32 0 chr17 35090897 35090928 -60181723 + (CAAAAA)n Simple_repeat Simple_repeat 3 34 0 2 852 273 208 13 40 chr17 35091824 35091899 -60180752 - ID4_ SINE ID -9 74 2 2 852 429 226 103 9 chr17 35092081 35092197 -60180454 + B1F2 SINE Alu 11 137 -12 2 852 207 0 0 0 chr17 35092203 35092226 -60180425 + (TCTCTG)n Simple_repeat Simple_repeat 2 24 0 2 852 210 71 0 0 chr17 35092226 35092254 -60180397 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 852 255 329 67 87 chr17 35092286 35092436 -60180215 + B1F SINE Alu 1 147 -2 3 852 244 211 0 90 chr17 35092440 35092518 -60180133 + PB1D9 SINE Alu 44 143 -6 3 852 614 253 46 35 chr17 35092571 35092677 -60179974 - URR1B DNA MER1_type 0 225 117 3 852 773 147 35 7 chr17 35092677 35092821 -60179830 + B1_Mus1 SINE Alu 1 148 0 3 852 614 253 46 35 chr17 35092821 35092911 -60179740 - URR1B DNA MER1_type -109 116 27 3 852 1239 94 44 0 chr17 35093133 35093313 -60179338 + B2_Mm2 SINE B2 1 188 -7 3 852 330 98 0 0 chr17 35093811 35093862 -60178789 + (TA)n Simple_repeat Simple_repeat 1 51 0 3 852 278 208 26 53 chr17 35097029 35097105 -60175546 + PB1D7 SINE Alu 47 120 0 3 852 379 274 18 9 chr17 35097512 35097626 -60175025 + PB1D10 SINE Alu 3 117 0 3 852 648 244 8 0 chr17 35097717 35097848 -60174803 - ID_B1 SINE B4 0 224 93 3 852 570 29 0 0 chr17 35097936 35098004 -60174647 + (TC)n Simple_repeat Simple_repeat 2 69 0 3 852 387 0 0 0 chr17 35098004 35098046 -60174605 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 852 398 273 52 15 chr17 35098458 35098592 -60174059 - B1F SINE Alu -9 140 2 3 852 1291 81 32 0 chr17 35098690 35098876 -60173775 - B2_Mm1a SINE B2 -1 192 1 3 852 301 282 0 0 chr17 35098931 35099002 -60173649 + ID4_ SINE ID 4 74 -9 3 852 240 35 0 0 chr17 35099018 35099047 -60173604 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 852 432 0 0 0 chr17 35099387 35099435 -60173216 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 852 678 25 0 0 chr17 35099435 35099514 -60173137 + (GA)n Simple_repeat Simple_repeat 1 80 0 3 852 246 271 35 78 chr17 35099834 35099950 -60172701 + PB1D7 SINE Alu 1 111 -9 3 852 843 269 24 0 chr17 35099956 35100164 -60172487 + ID_B1 SINE B4 10 222 -2 3 852 543 288 20 14 chr17 35100390 35100538 -60172113 + B1F2 SINE Alu 1 149 0 3 852 1084 62 0 0 chr17 35100660 35100804 -60171847 - B2_Mm2 SINE B2 -50 145 2 3 852 453 331 6 59 chr17 35100824 35100994 -60171657 - B3A SINE B2 0 198 38 3 852 202 132 38 0 chr17 35101003 35101056 -60171595 + (TA)n Simple_repeat Simple_repeat 1 55 0 3 852 554 131 54 45 chr17 35101128 35101240 -60171411 - B1_Mus2 SINE Alu 0 147 35 3 852 291 265 33 100 chr17 35102122 35102145 -60170506 - B4A SINE B4 -47 245 133 3 852 849 133 2 10 chr17 35102145 35102293 -60170358 - B1_Mus1 SINE Alu -3 145 2 3 852 415 202 116 30 chr17 35102302 35102481 -60170170 - B3 SINE B2 0 195 7 3 852 453 255 0 52 chr17 35102517 35102633 -60170018 - PB1D7 SINE Alu 0 120 11 3 852 195 129 0 0 chr17 35102657 35102688 -60169963 + (TCC)n Simple_repeat Simple_repeat 1 31 0 3 852 655 77 0 0 chr17 35103024 35103115 -60169536 + 4.5SRNA scRNA scRNA 1 91 -3 3 852 1092 62 7 0 chr17 35103115 35103260 -60169391 + B1_Mm SINE Alu 2 147 0 3 852 1757 161 105 6 chr17 35103275 35103618 -60169033 - MTC LTR MaLR -44 377 1 3 852 1194 42 0 0 chr17 35103618 35103762 -60168889 + B1_Mus1 SINE Alu 1 144 -4 3 852 239 0 32 0 chr17 35103763 35103794 -60168857 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 3 852 499 242 64 8 chr17 35103939 35104064 -60168587 + RSINE1 SINE B4 3 134 -31 3 852 351 0 0 0 chr17 35104085 35104124 -60168527 + (TC)n Simple_repeat Simple_repeat 1 39 0 3 852 441 0 0 0 chr17 35104124 35104172 -60168479 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 852 1974 93 15 28 chr17 35104172 35104498 -60168153 - MTB LTR MaLR 0 400 2 3 852 374 289 27 47 chr17 35104959 35105108 -60167543 + RSINE1 SINE B4 3 148 -17 3 852 194 0 39 0 chr17 35105811 35105837 -60166814 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 852 1110 58 0 0 chr17 35105837 35105975 -60166676 - B1_Mm SINE Alu -9 138 1 3 852 21 36 0 0 chr17 35106710 35106738 -60165913 + AT_rich Low_complexity Low_complexity 1 28 0 3 852 210 233 221 0 chr17 35110296 35110382 -60162269 + PB1D10 SINE Alu 1 105 -12 3 852 285 145 0 0 chr17 35110522 35110584 -60162067 + (TCTG)n Simple_repeat Simple_repeat 4 65 0 3 852 459 0 0 0 chr17 35110702 35110753 -60161898 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 852 216 0 0 0 chr17 35110753 35110777 -60161874 + (GA)n Simple_repeat Simple_repeat 1 24 0 3 852 274 236 96 11 chr17 35110794 35110888 -60161763 - B3A SINE B2 -88 110 9 3 852 728 277 52 7 chr17 35111087 35111378 -60161273 + L1MB2 LINE L1 5660 5963 -208 3 852 1132 79 0 0 chr17 35111557 35111696 -60160955 + B1_Mus1 SINE Alu 2 140 -8 3 852 560 66 0 0 chr17 35111901 35111977 -60160674 - B1_Mus2 SINE Alu 0 147 72 3 852 257 243 27 13 chr17 35112116 35112191 -60160460 + ID4 SINE ID 6 81 -2 3 852 231 109 21 21 chr17 35112500 35112547 -60160104 + B1_Mm SINE Alu 101 147 0 3 852 303 179 0 0 chr17 35112549 35112616 -60160035 + A-rich Low_complexity Low_complexity 1 67 0 3 852 465 238 6 109 chr17 35112617 35112782 -60159869 + B1F SINE Alu 1 148 -1 3 852 703 289 131 8 chr17 35112803 35113047 -60159604 + B4 SINE B4 1 274 -18 3 852 396 55 0 0 chr17 35113055 35113110 -60159541 + (CA)n Simple_repeat Simple_repeat 1 55 0 3 852 320 311 249 6 chr17 35113227 35113382 -60159269 + B3 SINE B2 1 193 -23 3 852 23 33 0 0 chr17 35113382 35113412 -60159239 + AT_rich Low_complexity Low_complexity 1 30 0 3 852 1706 26 0 0 chr17 35113424 35113617 -60159034 + B2_Mm1t SINE B2 1 193 0 3 852 390 259 132 61 chr17 35113623 35113820 -60158831 + B3 SINE B2 3 213 -3 3 852 544 281 20 7 chr17 35116189 35116336 -60156315 - B1F SINE Alu 0 149 1 3 852 693 57 274 0 chr17 35116392 35116498 -60156153 - B1_Mus1 SINE Alu -9 139 5 3 852 302 234 52 0 chr17 35116718 35116795 -60155856 - PB1D10 SINE Alu 0 117 37 3 852 443 286 0 135 chr17 35116963 35117133 -60155518 + B4A SINE B4 97 243 -49 3 852 820 214 77 15 chr17 35117109 35117304 -60155347 + B3 SINE B2 8 214 -2 3 852 22 0 0 0 chr17 35117598 35117620 -60155031 + AT_rich Low_complexity Low_complexity 1 22 0 3 852 1237 99 23 11 chr17 35117625 35117799 -60154852 + B2_Mm2 SINE B2 2 177 -18 3 852 733 186 94 16 chr17 35118002 35118193 -60154458 + B3 SINE B2 6 211 -5 3 852 21 0 0 0 chr17 35118265 35118286 -60154365 + AT_rich Low_complexity Low_complexity 1 21 0 3 852 280 290 92 18 chr17 35118472 35118581 -60154070 - PB1D10 SINE Alu 0 117 1 3 852 460 207 153 0 chr17 35119786 35119897 -60152754 + B1F2 SINE Alu 1 128 -21 3 852 362 154 31 0 chr17 35119916 35119981 -60152670 - PB1D9 SINE Alu -27 93 27 3 852 1200 68 0 0 chr17 35120229 35120376 -60152275 - B1_Mus1 SINE Alu 0 148 2 3 852 261 39 0 88 chr17 35120750 35120807 -60151844 + Lx LINE L1 6603 6654 0 3 852 337 79 564 26 chr17 35120809 35120887 -60151764 + PB1D9 SINE Alu 1 120 0 3 852 679 243 38 100 chr17 35121033 35121075 -60151576 + B3A SINE B2 1 33 -165 3 852 1281 84 10 45 chr17 35121075 35121275 -60151376 + B2_Mm1a SINE B2 1 193 0 3 852 679 243 38 100 chr17 35121275 35121442 -60151209 + B3A SINE B2 34 197 -1 3 852 456 131 139 20 chr17 35121599 35121700 -60150951 + B1_Mur3 SINE Alu 22 134 -15 3 852 354 222 118 29 chr17 35121716 35121818 -60150833 + PB1D7 SINE Alu 10 120 0 3 852 2947 178 159 2 chr17 35123019 35123627 -60149024 - RMER19A LTR ERVK -33 704 1 3 852 572 67 600 0 chr17 35123686 35123806 -60148845 - B2_Mm2 SINE B2 -3 192 1 3 852 2335 138 76 73 chr17 35123807 35123889 -60148762 - MYSERV6-int LTR ERVK -680 5870 5786 3 852 1213 36 0 0 chr17 35123889 35124028 -60148623 + B1_Mm SINE Alu 1 139 -8 3 852 2335 138 76 73 chr17 35124028 35124455 -60148196 - MYSERV6-int LTR ERVK -765 5785 5355 3 852 1395 71 49 5 chr17 35124455 35124640 -60148011 + B2_Mm2 SINE B2 2 194 -1 3 852 2335 138 76 73 chr17 35124640 35124692 -60147959 - MYSERV6-int LTR ERVK -1196 5354 5306 3 852 410 258 156 24 chr17 35124692 35124859 -60147792 - RMER4A LTR ERVK -27 439 251 3 852 1958 137 42 12 chr17 35124859 35125191 -60147460 - MYSERV6-int LTR ERVK -1424 5126 4785 3 852 1552 115 84 4 chr17 35125213 35125475 -60147176 - MYSERV6-int LTR ERVK -2660 3890 3608 3 852 1020 82 7 0 chr17 35125482 35125628 -60147023 - B1_Mus1 SINE Alu 0 148 2 3 852 242 289 0 20 chr17 35125628 35125668 -60146983 - ORR1B1-int LTR MaLR -862 647 611 3 852 5420 134 63 94 chr17 35125668 35126302 -60146349 - MYSERV6-int LTR ERVK -5289 3670 3016 3 852 492 71 0 0 chr17 35126302 35126372 -60146279 - B1_Mus2 SINE Alu -35 112 43 3 852 5420 134 63 94 chr17 35126372 35126423 -60146228 - MYSERV6-int LTR ERVK -5289 3015 2962 3 852 1317 85 34 0 chr17 35126423 35126600 -60146051 - B2_Mm1a SINE B2 -9 184 2 3 852 5420 134 63 94 chr17 35126600 35126900 -60145751 - MYSERV6-int LTR ERVK -5998 2961 2666 3 852 1619 22 0 0 chr17 35126906 35127084 -60145567 + B2_Mm1a SINE B2 2 179 -14 3 852 1242 90 37 16 chr17 35127084 35127268 -60145383 - B2_Mm2 SINE B2 -6 189 1 3 106 5420 134 63 94 chr17 35127268 35127501 -60145150 - MYSERV6-int LTR ERVK -6294 2665 2421 3 853 299 314 70 21 chr17 35128088 35128231 -60144420 - MERVK26-int LTR ERVK -1068 5851 5702 3 853 941 264 102 9 chr17 35128625 35128958 -60143693 - MERVK26-int LTR ERVK -2089 4830 4467 3 853 384 255 64 111 chr17 35129330 35129502 -60143149 + B4A SINE B4 58 221 -71 3 853 969 73 0 0 chr17 35129371 35129508 -60143143 + B1_Mus1 SINE Alu 12 148 0 3 853 180 0 0 0 chr17 35129508 35129528 -60143123 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 853 7793 176 84 55 chr17 35129529 35129784 -60142867 - MYSERV-int LTR ERVK -4490 2060 1804 3 853 1511 48 11 0 chr17 35129784 35129973 -60142678 + B2_Mm1a SINE B2 2 192 -1 3 853 7793 176 84 55 chr17 35129973 35130060 -60142591 - MYSERV-int LTR ERVK -4747 1803 1701 3 853 1411 90 21 0 chr17 35130060 35130249 -60142402 - B2_Mm2 SINE B2 -1 194 2 3 853 7793 176 84 55 chr17 35130249 35130938 -60141713 - MYSERV-int LTR ERVK -4850 1700 959 3 853 186 43 0 0 chr17 35130938 35130961 -60141690 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 853 1097 59 0 22 chr17 35130961 35131100 -60141551 - B1_Mm SINE Alu -9 138 3 4 853 7793 176 84 55 chr17 35131100 35131254 -60141397 - MYSERV-int LTR ERVK -5592 958 832 3 853 1132 98 110 0 chr17 35131254 35131427 -60141224 - B2_Mm1t SINE B2 -1 192 1 4 853 7793 176 84 55 chr17 35131427 35132108 -60140543 - MYSERV-int LTR ERVK -5719 831 124 3 853 1551 59 5 0 chr17 35132108 35132295 -60140356 - B2_Mm1t SINE B2 -5 188 1 4 853 7793 176 84 55 chr17 35132295 35132424 -60140227 - MYSERV-int LTR ERVK -6427 123 4 3 853 835 94 17 0 chr17 35132542 35132659 -60139992 - PB1D9 SINE Alu -1 119 1 4 853 1219 115 44 0 chr17 35132687 35132869 -60139782 + B2_Mm2 SINE B2 2 191 -4 4 853 357 275 174 8 chr17 35132871 35133003 -60139648 + RMER13A LTR ERVK 311 464 -396 4 853 290 226 35 23 chr17 35133041 35133126 -60139525 + RMER13A LTR ERVK 609 694 -214 4 853 291 51 0 0 chr17 35133126 35133165 -60139486 + RLTR10B LTR ERVK 1 39 -253 4 853 2048 43 0 51 chr17 35133165 35133461 -60139190 + RLTR10B LTR ERVK 12 292 0 4 853 2177 170 86 7 chr17 35133618 35134081 -60138570 - RLTR11A LTR ERVK -28 500 1 4 853 1177 62 14 0 chr17 35134340 35134485 -60138166 - B1_Mus2 SINE Alu 0 147 1 4 853 383 299 89 57 chr17 35135138 35135507 -60137144 - RNERVK23-int LTR ERVK -1033 7184 6804 4 853 230 135 39 0 chr17 35136558 35136610 -60136041 - RLTR12B LTR ERVK -474 54 1 4 853 767 101 8 56 chr17 35136653 35136779 -60135872 - PB1D9 SINE Alu 0 120 1 4 853 2076 68 3 20 chr17 35137157 35137457 -60135194 - RLTR4_Mm LTR ERV1 0 742 448 4 853 1601 83 78 8 chr17 35137431 35137687 -60134964 - RLTR4_Mm LTR ERV1 -468 274 1 4 853 324 0 0 0 chr17 35139029 35139065 -60133586 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 853 1604 219 79 5 chr17 35139140 35139507 -60133144 - MTD LTR MaLR -8 411 18 4 853 419 239 162 86 chr17 35140034 35140065 -60132586 - B3 SINE B2 -3 213 183 4 853 243 0 0 0 chr17 35140065 35140092 -60132559 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 853 419 239 162 86 chr17 35140092 35140257 -60132394 - B3 SINE B2 -34 182 3 4 853 458 270 58 7 chr17 35140337 35140475 -60132176 - B1_Mur1 SINE Alu -2 147 3 4 853 499 214 60 60 chr17 35140572 35140721 -60131930 + URR1B DNA MER1_type 2 150 -75 4 853 889 137 45 85 chr17 35140722 35140779 -60131872 + URR1B DNA MER1_type 35 84 -141 4 853 1431 55 38 22 chr17 35140779 35140964 -60131687 + B2_Mm2 SINE B2 2 189 -6 4 853 889 137 45 85 chr17 35140964 35141105 -60131546 + URR1B DNA MER1_type 85 225 0 4 853 1683 42 0 0 chr17 35143118 35143311 -60129340 - B2_Mm1a SINE B2 0 193 1 4 853 262 72 52 35 chr17 35143312 35143370 -60129281 - B2_Mm2 SINE B2 0 195 137 4 853 243 218 0 35 chr17 35143369 35143426 -60129225 - B2_Mm1t SINE B2 -91 102 48 4 853 1305 75 17 0 chr17 35143476 35143649 -60129002 - B2_Mm1t SINE B2 -16 177 2 4 853 565 202 0 48 chr17 35143649 35143774 -60128877 - B1_Mur2 SINE Alu 0 149 31 4 853 651 240 65 32 chr17 35143834 35144019 -60128632 - B3A SINE B2 -7 191 1 4 853 537 58 0 0 chr17 35144023 35144092 -60128559 + (TTCCC)n Simple_repeat Simple_repeat 4 72 0 4 853 282 254 0 0 chr17 35144295 35144358 -60128293 + PB1D10 SINE Alu 50 112 -5 4 853 1340 104 5 40 chr17 35144454 35144655 -60127996 - B2_Mm2 SINE B2 -1 194 1 4 853 819 211 48 21 chr17 35144663 35144852 -60127799 - B3 SINE B2 -3 213 20 4 853 239 280 136 27 chr17 35144848 35144958 -60127693 - PB1 SINE Alu -5 122 1 4 853 475 258 162 0 chr17 35144985 35145152 -60127499 - B3 SINE B2 -4 212 19 4 853 249 303 58 48 chr17 35145247 35145351 -60127300 - B1F SINE Alu -30 119 15 4 853 248 342 32 57 chr17 35145351 35145371 -60127280 - ID_B1 SINE B4 -27 197 77 4 853 895 77 31 0 chr17 35145383 35145513 -60127138 - B1_Mus2 SINE Alu 0 147 14 4 853 370 229 75 103 chr17 35145388 35145534 -60127117 - B4 SINE B4 -71 221 80 4 853 469 253 67 15 chr17 35145560 35145684 -60126967 - B1_Mur4 SINE Alu 0 120 1 4 853 407 271 91 4 chr17 35145892 35146014 -60126637 + B4A SINE B4 1 127 -97 4 853 643 162 60 23 chr17 35146223 35146356 -60126295 - B1_Mur1 SINE Alu -10 139 2 4 853 180 0 0 0 chr17 35146375 35146395 -60126256 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 853 1221 55 7 0 chr17 35146398 35146543 -60126108 - B1_Mus1 SINE Alu 0 148 3 4 853 430 86 267 33 chr17 35147041 35147161 -60125490 - B2_Mm2 SINE B2 0 195 48 4 853 1013 61 218 0 chr17 35147194 35147341 -60125310 - B2_Mm1t SINE B2 -14 179 1 4 853 361 264 123 0 chr17 35154387 35154400 -60118251 + ID_B1 SINE B4 74 192 -32 4 853 415 183 172 0 chr17 35154400 35154493 -60118158 + B1F1 SINE Alu 6 114 -35 4 853 1068 41 48 0 chr17 35156146 35156291 -60116360 - B2_Mm2 SINE B2 -5 190 39 4 853 441 271 138 42 chr17 35157353 35157542 -60115109 - B3 SINE B2 -5 211 5 4 853 190 323 198 20 chr17 35157612 35157713 -60114938 + MIR SINE MIR 25 143 -119 4 853 400 238 2 100 chr17 35157932 35158064 -60114587 + B3A SINE B2 2 122 -73 4 853 770 230 216 63 chr17 35158765 35159127 -60113524 - RLTR18B LTR ERVK -95 417 1 4 853 844 45 0 0 chr17 35159408 35159518 -60113133 + B1_Mus1 SINE Alu 39 148 0 4 853 636 116 21 0 chr17 35160009 35160104 -60112547 - B1_Mur1 SINE Alu 0 149 53 4 853 218 175 0 0 chr17 35162004 35162044 -60110607 + G-rich Low_complexity Low_complexity 1 40 0 4 853 531 0 0 0 chr17 35162376 35162435 -60110216 + (TTTC)n Simple_repeat Simple_repeat 4 62 0 4 853 1027 104 0 19 chr17 35162435 35162592 -60110059 - B2_Mm1t SINE B2 -16 177 24 4 853 446 174 62 42 chr17 35162590 35162686 -60109965 - B1_Mur4 SINE Alu -52 98 1 4 853 286 221 37 128 chr17 35162591 35162700 -60109951 - MT2B LTR ERVL -350 251 153 4 853 288 221 184 11 chr17 35162723 35162810 -60109841 + PB1D7 SINE Alu 11 112 -8 4 853 23 0 0 0 chr17 35162903 35162926 -60109725 + AT_rich Low_complexity Low_complexity 1 23 0 4 853 1034 36 14 0 chr17 35163885 35164023 -60108628 - B1_Mus1 SINE Alu 0 148 9 4 853 22 0 0 0 chr17 35164126 35164148 -60108503 + GC_rich Low_complexity Low_complexity 1 22 0 4 853 777 196 22 0 chr17 35165091 35165229 -60107422 - B1_Mur1 SINE Alu -5 144 4 4 853 790 248 45 0 chr17 35165276 35165478 -60107173 - B3 SINE B2 -4 212 2 4 853 307 85 0 68 chr17 35165928 35165990 -60106661 - PB1D10 SINE Alu 0 127 66 4 853 255 61 0 0 chr17 35166026 35166059 -60106592 + (GGA)n Simple_repeat Simple_repeat 2 34 0 4 853 1121 195 19 5 chr17 35166323 35166529 -60106122 + B3 SINE B2 1 209 -7 4 853 547 200 17 17 chr17 35168742 35168754 -60103897 - PB1D9 SINE Alu -2 118 108 4 853 180 0 0 0 chr17 35168754 35168774 -60103877 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 4 853 547 200 17 17 chr17 35168774 35168878 -60103773 - PB1D9 SINE Alu -13 107 2 4 853 631 118 10 10 chr17 35168870 35168973 -60103678 + B1_Mur4 SINE Alu 1 103 -47 4 853 274 225 34 0 chr17 35168986 35169075 -60103576 + (CACCC)n Simple_repeat Simple_repeat 4 95 0 4 853 323 173 133 0 chr17 35169519 35169594 -60103057 + 7SK RNA RNA 28 112 -219 4 853 531 252 8 31 chr17 35169924 35170051 -60102600 + ID_B1 SINE B4 84 207 -17 4 853 258 256 49 41 chr17 35169948 35170070 -60102581 - YREP_Mm Unknown Unknown -1518 294 172 4 853 411 21 0 0 chr17 35170465 35170513 -60102138 + (TCC)n Simple_repeat Simple_repeat 2 49 0 4 853 982 123 7 0 chr17 35170814 35170952 -60101699 + B1_Mur3 SINE Alu 5 143 -6 4 853 776 65 9 0 chr17 35170959 35171066 -60101585 + (GA)n Simple_repeat Simple_repeat 2 109 0 4 853 1135 82 135 0 chr17 35171066 35171236 -60101415 + B2_Mm2 SINE B2 3 195 0 4 853 1697 26 0 0 chr17 35171238 35171431 -60101220 + B2_Mm1t SINE B2 1 193 0 4 853 1177 74 0 7 chr17 35171530 35171679 -60100972 + B1_Mur3 SINE Alu 2 149 0 4 853 323 348 89 0 chr17 35172138 35172296 -60100355 - MIR SINE MIR -89 173 2 4 853 1664 31 0 25 chr17 35172376 35172574 -60100077 - B2_Mm1t SINE B2 0 193 1 4 853 536 287 0 20 chr17 35172650 35172796 -60099855 + ID_B1 SINE B4 82 224 0 4 853 460 271 8 39 chr17 35172802 35172929 -60099722 + B1_Mur2 SINE Alu 27 149 0 4 853 1152 49 21 0 chr17 35172949 35173093 -60099558 - B1_Mus1 SINE Alu 0 148 2 4 853 335 266 0 0 chr17 35173094 35173173 -60099478 + B1_Mur1 SINE Alu 60 138 -11 4 853 261 0 0 0 chr17 35173173 35173202 -60099449 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 4 853 583 146 32 8 chr17 35173219 35173379 -60099272 + ORR1C1 LTR MaLR 1 219 -155 4 853 882 229 29 82 chr17 35173416 35173428 -60099223 + RMER16 LTR ERVK 268 279 -254 4 853 3172 73 8 0 chr17 35173428 35173825 -60098826 + MTB LTR MaLR 1 400 0 4 853 882 229 29 82 chr17 35173825 35174093 -60098558 + RMER16 LTR ERVK 280 533 0 4 853 990 169 25 35 chr17 35174093 35174295 -60098356 + ORR1C1 LTR MaLR 179 378 0 4 853 666 176 39 84 chr17 35174448 35174603 -60098048 + B1_Mur3 SINE Alu 1 148 -1 4 853 383 218 10 0 chr17 35174603 35174704 -60097947 + (TAGA)n Simple_repeat Simple_repeat 1 102 0 4 853 208 67 39 135 chr17 35174704 35174734 -60097917 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 4 853 976 150 0 0 chr17 35174734 35174874 -60097777 + B1_Mus2 SINE Alu 1 140 -7 4 853 208 67 39 135 chr17 35174874 35174895 -60097756 + (TAAA)n Simple_repeat Simple_repeat 1 16 0 4 853 225 260 70 3 chr17 35175254 35175340 -60097311 + B1F1 SINE Alu 21 114 -3 4 853 551 287 20 0 chr17 35175494 35175644 -60097007 + B3A SINE B2 39 191 -7 4 853 231 36 0 0 chr17 35175645 35175673 -60096978 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 4 853 445 178 0 0 chr17 35175673 35175746 -60096905 - B1_Mur1 SINE Alu -14 135 63 4 853 983 95 58 14 chr17 35175790 35175929 -60096722 + B1_Mur2 SINE Alu 2 146 -3 4 853 665 178 0 25 chr17 35175930 35176051 -60096600 + PB1D9 SINE Alu 3 120 0 4 853 531 236 39 23 chr17 35176837 35176967 -60095684 - ID_B1 SINE B4 0 224 93 5 853 236 340 135 10 chr17 35177044 35177148 -60095503 - RSINE1 SINE B4 -47 118 2 5 853 608 295 6 6 chr17 35177215 35177372 -60095279 - RSINE1 SINE B4 0 165 9 5 853 624 164 55 0 chr17 35177415 35177525 -60095126 - PB1D9 SINE Alu 0 120 5 5 853 1247 84 0 6 chr17 35177542 35177722 -60094929 - B2_Mm2 SINE B2 -9 186 8 5 853 1166 55 14 0 chr17 35177751 35177897 -60094754 - B1_Mus1 SINE Alu 0 148 1 5 853 557 224 196 7 chr17 35178073 35178221 -60094430 + MTE2a LTR MaLR 5 180 -199 5 853 917 130 22 0 chr17 35179200 35179338 -60093313 - B1_Mur2 SINE Alu -8 141 1 5 853 734 304 17 47 chr17 35179398 35179633 -60093018 - B4A SINE B4 -59 233 6 5 853 1550 52 21 0 chr17 35179774 35179965 -60092686 - B2_Mm2 SINE B2 0 195 1 5 853 729 185 59 0 chr17 35180017 35180152 -60092499 + B1_Mur2 SINE Alu 1 143 -6 5 853 321 26 0 0 chr17 35180181 35180219 -60092432 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 5 853 1447 76 16 5 chr17 35180258 35180444 -60092207 + B2_Mm2 SINE B2 2 189 -6 5 853 219 173 0 0 chr17 35180856 35180908 -60091743 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 853 680 210 39 71 chr17 35182434 35182588 -60090063 + B1_Mur2 SINE Alu 1 149 0 5 853 180 345 0 0 chr17 35182728 35182783 -60089868 + L2c LINE L2 3331 3385 -2 5 853 255 31 0 0 chr17 35183568 35183600 -60089051 + (CCCCCA)n Simple_repeat Simple_repeat 3 34 0 5 853 262 234 0 30 chr17 35184075 35184141 -60088510 + MIR SINE MIR 189 252 -10 5 853 200 111 28 0 chr17 35184557 35184593 -60088058 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 853 26 0 0 0 chr17 35185453 35185479 -60087172 + GC_rich Low_complexity Low_complexity 1 26 0 5 853 186 103 0 0 chr17 35185643 35185672 -60086979 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 853 264 73 0 0 chr17 35185755 35185781 -60086870 + (TTTTTG)n Simple_repeat Simple_repeat 5 30 0 5 853 1240 61 0 0 chr17 35185781 35185928 -60086723 - B1_Mm SINE Alu 0 147 1 5 853 264 73 0 0 chr17 35185928 35185942 -60086709 + (TTTTTG)n Simple_repeat Simple_repeat 3 16 0 5 853 1063 109 0 0 chr17 35185962 35186109 -60086542 + B1_Mus1 SINE Alu 2 148 0 5 853 363 23 0 0 chr17 35186110 35186154 -60086497 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 853 680 128 29 0 chr17 35186164 35186266 -60086385 + U6 snRNA snRNA 3 107 0 5 853 225 0 0 0 chr17 35186828 35186853 -60085798 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 5 853 189 147 0 0 chr17 35187851 35187885 -60084766 + (GA)n Simple_repeat Simple_repeat 1 34 0 5 853 899 0 22 30 chr17 35187888 35188023 -60084628 + (GGAGA)n Simple_repeat Simple_repeat 3 136 0 5 853 444 19 0 0 chr17 35189635 35189688 -60082963 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 853 209 122 0 24 chr17 35190242 35190284 -60082367 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 5 853 693 237 135 16 chr17 35190288 35190481 -60082170 - B3 SINE B2 0 216 1 5 853 208 115 32 32 chr17 35190586 35190649 -60082002 + T-rich Low_complexity Low_complexity 3 65 0 5 853 1196 75 0 0 chr17 35190650 35190797 -60081854 - B1_Mus2 SINE Alu 0 147 1 5 853 202 324 44 0 chr17 35190941 35191036 -60081615 + MIRc SINE MIR 91 194 -74 5 853 229 281 47 0 chr17 35191075 35191139 -60081512 + ID4 SINE ID 7 73 -10 5 853 626 274 49 44 chr17 35191164 35191389 -60081262 + B4A SINE B4 3 228 -64 5 853 630 273 80 10 chr17 35191389 35191513 -60081138 + B3 SINE B2 1 135 -81 5 853 186 43 0 0 chr17 35191513 35191536 -60081115 + (CCA)n Simple_repeat Simple_repeat 3 25 0 5 853 630 273 80 10 chr17 35191536 35191611 -60081040 + B3 SINE B2 136 214 -2 5 853 216 0 0 0 chr17 35191625 35191649 -60081002 + (GA)n Simple_repeat Simple_repeat 2 25 0 5 853 1581 57 0 5 chr17 35191649 35191842 -60080809 + B2_Mm2 SINE B2 4 195 0 5 853 411 21 0 0 chr17 35191844 35191892 -60080759 + (GGAA)n Simple_repeat Simple_repeat 3 50 0 5 853 269 271 0 14 chr17 35191892 35191942 -60080709 + B4A SINE B4 219 268 -24 5 853 252 0 0 0 chr17 35191942 35191970 -60080681 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 853 269 271 0 14 chr17 35191970 35191990 -60080661 + B4A SINE B4 269 288 -4 5 853 291 270 0 0 chr17 35192049 35192112 -60080539 - ID4 SINE ID -19 64 2 5 853 1237 48 0 0 chr17 35192402 35192548 -60080103 - B1_Mus2 SINE Alu 0 147 2 5 853 528 289 0 15 chr17 35192604 35192734 -60079917 - RSINE1 SINE B4 -35 130 3 5 853 384 214 0 0 chr17 35192745 35192815 -60079836 - B4A SINE B4 -192 100 31 5 853 407 235 0 6 chr17 35192991 35193158 -60079493 + (TG)n Simple_repeat Simple_repeat 1 166 0 5 853 384 256 0 11 chr17 35193444 35193535 -60079116 + PB1D7 SINE Alu 22 111 -9 5 853 459 138 0 0 chr17 35193567 35193591 -60079060 + (A)n Simple_repeat Simple_repeat 1 24 0 5 853 1202 74 0 0 chr17 35193591 35193739 -60078912 + B1_Mus1 SINE Alu 1 148 0 5 853 459 138 0 0 chr17 35193739 35193794 -60078857 + (A)n Simple_repeat Simple_repeat 1 55 0 5 853 838 230 19 39 chr17 35193890 35194098 -60078553 + B3 SINE B2 2 205 -11 5 853 306 0 0 0 chr17 35194175 35194209 -60078442 + (TC)n Simple_repeat Simple_repeat 2 35 0 5 853 369 0 0 0 chr17 35194209 35194249 -60078402 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 853 272 286 11 35 chr17 35194306 35194393 -60078258 - B3A SINE B2 -33 183 99 5 853 219 269 0 0 chr17 35194475 35194527 -60078124 - B1_Mur2 SINE Alu -6 143 92 5 853 292 152 0 0 chr17 35194526 35194572 -60078079 + B1_Mus2 SINE Alu 91 136 -11 5 853 618 176 277 6 chr17 35194641 35194807 -60077844 + B3 SINE B2 5 215 -1 5 853 976 151 7 0 chr17 35194811 35194957 -60077694 + B1_Mus2 SINE Alu 1 147 0 5 853 186 71 0 0 chr17 35195146 35195174 -60077477 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 5 853 216 0 0 0 chr17 35199131 35199155 -60073496 + (T)n Simple_repeat Simple_repeat 1 24 0 5 853 1231 61 0 0 chr17 35199155 35199302 -60073349 - B1_Mus2 SINE Alu 0 147 1 5 853 691 168 107 0 chr17 35199314 35199445 -60073206 - B1_Mur4 SINE Alu -5 145 1 5 853 664 159 76 38 chr17 35200904 35201035 -60071616 + B1_Mus1 SINE Alu 2 137 -11 5 853 276 167 133 0 chr17 35201482 35201542 -60071109 - PB1D10 SINE Alu -26 91 24 5 853 210 71 0 0 chr17 35201868 35201896 -60070755 + (CGGGGG)n Simple_repeat Simple_repeat 5 32 0 5 853 180 97 0 0 chr17 35202896 35202927 -60069724 + (TC)n Simple_repeat Simple_repeat 1 31 0 5 853 27 29 0 0 chr17 35202930 35202964 -60069687 + GC_rich Low_complexity Low_complexity 1 34 0 5 853 270 0 0 0 chr17 35202964 35202994 -60069657 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 853 453 298 156 33 chr17 35203372 35203584 -60069067 + MIR SINE MIR 25 262 0 5 853 324 197 16 0 chr17 35204616 35204677 -60067974 - ID_B1 SINE B4 -70 154 93 5 853 423 87 0 0 chr17 35206695 35206764 -60065887 + (CA)n Simple_repeat Simple_repeat 1 69 0 5 853 552 285 43 7 chr17 35207028 35207166 -60065485 + ID_B1 SINE B4 81 223 -1 5 853 801 150 49 21 chr17 35207176 35207305 -60065346 + B1_Mus1 SINE Alu 2 136 -12 5 853 471 18 0 0 chr17 35207305 35207361 -60065290 + (CAAAA)n Simple_repeat Simple_repeat 4 59 0 5 853 801 150 49 21 chr17 35207361 35207374 -60065277 + B1_Mus1 SINE Alu 137 148 0 5 853 209 140 0 23 chr17 35207377 35207421 -60065230 + GA-rich Low_complexity Low_complexity 3 45 0 5 853 185 139 23 0 chr17 35207479 35207522 -60065129 + G-rich Low_complexity Low_complexity 3 46 0 5 853 771 193 50 0 chr17 35208117 35208257 -60064394 + B1_Mus2 SINE Alu 1 147 0 5 853 237 114 0 0 chr17 35208290 35208325 -60064326 + B1_Mus1 SINE Alu 6 40 -108 5 853 493 252 20 54 chr17 35209010 35209157 -60063494 + B1F SINE Alu 5 146 -3 5 853 331 265 52 14 chr17 35209164 35209265 -60063386 + ID_B1 SINE B4 2 97 -195 5 853 1304 86 11 11 chr17 35209265 35209441 -60063210 + B2_Mm2 SINE B2 1 176 -19 5 853 1121 113 30 0 chr17 35209444 35209612 -60063039 + B2_Mm1t SINE B2 2 174 -19 5 853 228 244 192 42 chr17 35209614 35209734 -60062917 + B1F2 SINE Alu 5 142 -7 5 853 525 214 144 36 chr17 35209749 35209943 -60062708 + B3 SINE B2 2 216 0 5 853 801 276 71 0 chr17 35209966 35210162 -60062489 + B3 SINE B2 1 210 -6 5 853 608 224 0 144 chr17 35210189 35210310 -60062341 + B1_Mur1 SINE Alu 7 120 -29 5 853 1194 68 0 0 chr17 35210310 35210458 -60062193 + B1_Mus1 SINE Alu 1 148 0 5 853 608 224 0 144 chr17 35210458 35210479 -60062172 + B1_Mur1 SINE Alu 121 136 -13 5 853 227 31 0 30 chr17 35210479 35210512 -60062139 + (CCAA)n Simple_repeat Simple_repeat 4 35 0 5 853 608 224 0 144 chr17 35210512 35210535 -60062116 + B1_Mur1 SINE Alu 137 149 0 5 853 259 228 174 14 chr17 35210628 35210766 -60061885 + L1MC4a LINE L1 7714 7873 -9 5 853 405 0 0 0 chr17 35210770 35210815 -60061836 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 853 485 244 90 20 chr17 35211757 35211958 -60060693 + Charlie1b DNA MER1_type 181 395 -128 5 853 425 195 24 38 chr17 35211952 35212075 -60060576 - PB1D10 SINE Alu -22 127 1 5 853 213 39 0 0 chr17 35212160 35212186 -60060465 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 853 581 246 0 8 chr17 35212201 35212320 -60060331 - B1F SINE Alu -31 118 1 5 853 975 208 14 63 chr17 35212348 35212569 -60060082 - B3 SINE B2 -6 210 1 5 853 274 339 103 35 chr17 35212599 35212715 -60059936 + B3A SINE B2 2 125 -73 5 853 516 59 0 0 chr17 35212715 35212783 -60059868 + (TC)n Simple_repeat Simple_repeat 1 68 0 5 853 216 0 0 0 chr17 35212783 35212806 -60059845 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 853 466 157 0 0 chr17 35212854 35212936 -60059715 + B1_Mur1 SINE Alu 46 128 -22 6 853 494 307 13 26 chr17 35212972 35213126 -60059525 - RSINE1 SINE B4 -3 162 11 6 853 364 247 75 0 chr17 35213134 35213227 -60059424 + Charlie1b DNA MER1_type 400 499 -24 5 853 228 200 0 0 chr17 35213707 35213772 -60058879 + A-rich Low_complexity Low_complexity 1 65 0 6 853 230 170 0 54 chr17 35214176 35214232 -60058419 + G-rich Low_complexity Low_complexity 2 54 0 6 853 296 203 43 0 chr17 35214300 35214369 -60058282 + PB1D10 SINE Alu 38 109 -8 6 853 443 208 0 0 chr17 35215634 35215706 -60056945 + ID4_ SINE ID 3 74 -9 6 853 288 0 0 0 chr17 35215706 35215738 -60056913 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 6 853 867 224 25 30 chr17 35215928 35216130 -60056521 + B3 SINE B2 16 216 0 6 853 365 228 141 59 chr17 35216132 35216267 -60056384 + B4A SINE B4 81 226 -66 6 853 678 85 0 0 chr17 35216326 35216420 -60056231 + (CA)n Simple_repeat Simple_repeat 2 95 0 6 853 507 33 0 0 chr17 35216653 35216714 -60055937 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 853 462 186 167 0 chr17 35218560 35218662 -60053989 - PB1D7 SINE Alu -1 119 1 6 853 561 229 16 0 chr17 35218713 35218835 -60053816 - B1_Mur1 SINE Alu -12 137 14 6 853 443 227 108 15 chr17 35218864 35218994 -60053657 - B1F1 SINE Alu -6 143 2 6 853 360 119 0 0 chr17 35219006 35219065 -60053586 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 853 891 292 41 7 chr17 35219069 35219258 -60053393 - B4 SINE B4 -13 279 81 6 853 387 0 0 0 chr17 35219258 35219301 -60053350 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 853 891 292 41 7 chr17 35219301 35219380 -60053271 - B4 SINE B4 -212 80 3 6 853 261 139 0 0 chr17 35219392 35219435 -60053216 + (T)n Simple_repeat Simple_repeat 1 43 0 6 853 1047 84 0 0 chr17 35219435 35219577 -60053074 - B1_Mus2 SINE Alu 0 147 6 6 853 623 55 4 5 chr17 35220556 35220650 -60052001 - B1_Mur4 SINE Alu 0 150 28 6 853 452 255 74 148 chr17 35220706 35220922 -60051729 + ID_B1 SINE B4 2 201 -23 6 853 234 81 0 0 chr17 35221215 35221252 -60051399 + (A)n Simple_repeat Simple_repeat 1 37 0 6 853 242 264 32 65 chr17 35221263 35221356 -60051295 + PB1D7 SINE Alu 1 90 -30 6 853 236 208 0 19 chr17 35221357 35221411 -60051240 - MTEb LTR MaLR -7 372 320 6 853 1034 121 17 0 chr17 35221435 35221608 -60051043 + (CACCAT)n Simple_repeat Simple_repeat 1 176 0 6 853 732 158 0 30 chr17 35221608 35221739 -60050912 - B1_Mus1 SINE Alu -21 127 1 6 853 760 274 89 35 chr17 35221739 35221996 -60050655 - MTEb LTR MaLR -55 324 54 6 853 237 327 133 29 chr17 35221858 35222031 -60050620 - MLT2B1 LTR ERVL -296 224 34 6 853 398 299 67 72 chr17 35222053 35222233 -60050418 - ID_B1 SINE B4 -38 186 8 6 853 1649 32 0 11 chr17 35223138 35223329 -60049322 - B2_Mm1a SINE B2 -2 191 3 6 853 376 352 57 0 chr17 35223338 35223460 -60049191 - ID_B1 SINE B4 -7 217 89 6 853 584 269 8 0 chr17 35223545 35223675 -60048976 + RSINE1 SINE B4 3 133 -32 6 853 1767 215 47 17 chr17 35223676 35224078 -60048573 + MTD LTR MaLR 1 414 -5 6 853 743 157 6 130 chr17 35224078 35224247 -60048404 + B1_Mur2 SINE Alu 1 148 -1 6 853 1131 163 20 0 chr17 35224271 35224467 -60048184 - MTC LTR MaLR 0 421 222 6 853 556 182 0 123 chr17 35224449 35224504 -60048147 - ORR1B1-int LTR MaLR -1078 431 392 6 853 1512 78 0 5 chr17 35224504 35224697 -60047954 + B2_Mm2 SINE B2 2 193 -2 6 853 556 182 0 123 chr17 35224697 35224779 -60047872 - ORR1B1-int LTR MaLR -1118 391 311 6 853 505 233 153 27 chr17 35224883 35225033 -60047618 - B2_Mm2 SINE B2 -12 183 15 6 853 621 197 13 127 chr17 35225039 35225196 -60047455 - B1_Mur1 SINE Alu -9 140 2 6 853 1346 92 16 16 chr17 35225241 35225429 -60047222 + B2_Mm2 SINE B2 2 189 -6 6 853 297 0 0 0 chr17 35225478 35225511 -60047140 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 853 213 246 16 16 chr17 35225511 35225568 -60047083 - ID SINE ID -158 66 10 6 853 1250 48 0 0 chr17 35225679 35225826 -60046825 + B1_Mus2 SINE Alu 1 147 0 6 853 1389 80 32 0 chr17 35225836 35226023 -60046628 + B2_Mm2 SINE B2 1 193 -2 6 853 180 77 0 0 chr17 35226174 35226200 -60046451 + (CACG)n Simple_repeat Simple_repeat 1 26 0 6 853 875 162 155 73 chr17 35228194 35228400 -60044251 - URR1B DNA MER1_type -2 223 1 6 853 342 221 56 34 chr17 35228930 35229019 -60043632 + PB1D9 SINE Alu 20 110 -10 6 853 1067 42 42 0 chr17 35229058 35229224 -60043427 + (TG)n Simple_repeat Simple_repeat 1 173 0 6 853 1342 218 75 3 chr17 35229253 35229547 -60043104 - Lx5 LINE L1 -23 7027 6713 6 853 244 294 147 23 chr17 35229557 35229686 -60042965 - B3 SINE B2 -32 184 40 6 853 525 235 0 32 chr17 35230131 35230254 -60042397 + B1F SINE Alu 30 148 -1 6 853 1170 69 7 0 chr17 35230256 35230401 -60042250 + B1_Mus1 SINE Alu 3 148 0 6 853 412 284 94 0 chr17 35230454 35230581 -60042070 + B1F SINE Alu 6 144 -5 6 853 498 200 81 62 chr17 35230617 35230777 -60041874 + RSINE1 SINE B4 3 165 0 6 853 223 250 0 0 chr17 35230786 35230822 -60041829 + (TAA)n Simple_repeat Simple_repeat 1 36 0 6 853 1234 47 0 26 chr17 35230822 35230974 -60041677 + B1_Mus1 SINE Alu 1 148 0 6 853 223 250 0 0 chr17 35230974 35230997 -60041654 + (TAA)n Simple_repeat Simple_repeat 1 23 0 6 853 240 35 0 0 chr17 35231093 35231122 -60041529 + (TCC)n Simple_repeat Simple_repeat 1 29 0 6 853 396 0 0 0 chr17 35231349 35231393 -60041258 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 853 191 300 121 15 chr17 35231831 35231963 -60040688 - MIR SINE MIR -80 182 37 6 853 280 117 45 28 chr17 35232349 35232414 -60040237 - B1_Mus2 SINE Alu -1 148 79 6 853 293 257 93 19 chr17 35232545 35232652 -60039999 - PB1D7 SINE Alu -1 119 5 6 853 421 208 92 46 chr17 35232659 35232790 -60039861 - B1F2 SINE Alu -12 137 1 6 853 1226 61 0 0 chr17 35232797 35232944 -60039707 - B1_Mus2 SINE Alu 0 147 1 6 853 1306 155 75 34 chr17 35233991 35234285 -60038366 - ORR1B1 LTR MaLR -9 385 80 6 853 257 256 76 22 chr17 35235286 35235378 -60037273 + Tigger5 DNA MER2_type 2310 2406 0 6 853 254 293 13 0 chr17 35235416 35235491 -60037160 - BC1_Mm scRNA scRNA -71 81 6 6 853 208 280 57 48 chr17 35235995 35236100 -60036551 + MER5A DNA MER1_type 16 121 -68 6 853 472 231 161 0 chr17 35236107 35236237 -60036414 + ID_B1 SINE B4 7 157 -67 6 853 477 265 35 46 chr17 35236237 35236411 -60036240 + B4A SINE B4 2 173 -119 6 853 338 233 0 7 chr17 35236765 35236853 -60035798 + B1F SINE Alu 41 149 0 6 853 192 77 0 0 chr17 35237007 35237033 -60035618 + (CCCG)n Simple_repeat Simple_repeat 2 27 0 6 853 488 157 75 47 chr17 35240890 35240997 -60031654 + B1_Mur1 SINE Alu 32 141 -8 6 853 240 100 0 0 chr17 35241716 35241756 -60030895 + (TCCA)n Simple_repeat Simple_repeat 2 41 0 6 853 336 305 75 61 chr17 35242104 35242226 -60030425 + B3 SINE B2 1 125 -91 6 853 1178 54 0 13 chr17 35242226 35242375 -60030276 - B1_Mm SINE Alu 0 147 1 6 853 336 305 75 61 chr17 35242375 35242465 -60030186 + B3 SINE B2 126 216 0 6 853 338 187 152 83 chr17 35243432 35243566 -60029085 + B1F SINE Alu 1 149 0 6 853 1040 58 0 0 chr17 35243912 35244050 -60028601 - B1_Mus1 SINE Alu 0 148 11 6 853 1267 94 0 0 chr17 35244201 35244382 -60028269 - MT2C_Mm LTR ERVL -294 181 1 6 853 305 294 77 56 chr17 35244382 35244485 -60028166 - ORR1A3-int LTR MaLR -1350 613 507 6 853 447 306 22 0 chr17 35244437 35244571 -60028080 + MTE2a LTR MaLR 176 312 -67 6 853 1022 137 0 0 chr17 35244583 35244722 -60027929 + B1_Mus2 SINE Alu 2 140 -7 6 853 1145 90 0 0 chr17 35244740 35244885 -60027766 + B1_Mus2 SINE Alu 1 145 -2 6 853 410 94 16 0 chr17 35244885 35244949 -60027702 + (TAAA)n Simple_repeat Simple_repeat 1 65 0 6 853 299 238 37 24 chr17 35244979 35245061 -60027590 + MTE2a LTR MaLR 297 379 0 6 853 1130 62 0 33 chr17 35245410 35245561 -60027090 - B1_Mus2 SINE Alu 0 147 2 6 853 1176 132 85 38 chr17 35245563 35245775 -60026876 - URR1A DNA MER1_type -4 222 1 6 853 263 331 60 82 chr17 35246288 35246472 -60026179 + MT2B LTR ERVL 78 257 -344 6 853 557 200 36 0 chr17 35246402 35246512 -60026139 + B1_Mus2 SINE Alu 33 146 -1 6 853 513 0 0 0 chr17 35246590 35246647 -60026004 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 853 472 162 9 71 chr17 35246673 35246786 -60025865 + B2_Mm2 SINE B2 49 154 -41 6 853 384 22 0 0 chr17 35246787 35246832 -60025819 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 853 495 0 0 0 chr17 35246832 35246886 -60025765 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 853 207 0 0 0 chr17 35247136 35247159 -60025492 + (TTG)n Simple_repeat Simple_repeat 2 24 0 6 853 448 188 56 87 chr17 35247167 35247310 -60025341 - B1_Mur1 SINE Alu -5 144 6 6 853 921 64 0 0 chr17 35247345 35247470 -60025181 - B1_Mus1 SINE Alu 0 148 24 6 853 332 299 23 11 chr17 35248289 35248377 -60024274 - B3A SINE B2 -109 89 1 6 853 269 322 11 0 chr17 35249527 35249614 -60023037 - PB1D10 SINE Alu -18 99 12 6 853 267 250 108 20 chr17 35249779 35249881 -60022770 + PB1D7 SINE Alu 10 120 0 6 853 604 200 30 0 chr17 35250194 35250323 -60022328 - B1_Mur2 SINE Alu -6 143 4 6 853 527 229 29 0 chr17 35250344 35250449 -60022202 + PB1D10 SINE Alu 5 112 -5 6 853 381 58 0 0 chr17 35250813 35250865 -60021786 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 853 265 211 53 53 chr17 35253532 35253607 -60019044 - PB1D9 SINE Alu -6 114 40 7 853 1420 45 79 0 chr17 35253758 35253918 -60018733 + B2_Mm1a SINE B2 1 160 -33 7 853 207 0 0 0 chr17 35253918 35253941 -60018710 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 7 853 1420 45 79 0 chr17 35253941 35253958 -60018693 + B2_Mm1a SINE B2 161 190 -3 7 853 1220 62 0 0 chr17 35254119 35254265 -60018386 + B1_Mus2 SINE Alu 2 147 0 7 853 261 242 133 31 chr17 35254447 35254545 -60018106 - MIR SINE MIR -100 168 61 7 853 657 157 17 0 chr17 35256108 35256223 -60016428 + B1_Mur4 SINE Alu 22 138 -12 7 853 1393 68 23 0 chr17 35256223 35256399 -60016252 + B2_Mm2 SINE B2 2 181 -14 7 853 351 127 0 5 chr17 35256444 35256509 -60016142 + B2_Mm2 SINE B2 47 109 -107 7 853 504 216 0 84 chr17 35257216 35257347 -60015304 + B1F1 SINE Alu 1 120 0 7 854 1174 49 0 7 chr17 35259315 35259459 -60013192 + B1_Mus1 SINE Alu 4 146 -2 7 854 300 306 123 46 chr17 35260748 35260943 -60011708 + MIRb SINE MIR 56 265 -3 7 854 260 127 0 127 chr17 35262366 35262429 -60010222 - ID_B1 SINE B4 0 224 170 7 854 235 254 75 119 chr17 35262367 35262501 -60010150 - B1F1 SINE Alu 0 149 22 7 854 220 247 122 11 chr17 35262775 35262865 -60009786 + B1F1 SINE Alu 23 122 -27 7 854 243 0 0 0 chr17 35262875 35262902 -60009749 + (TA)n Simple_repeat Simple_repeat 2 28 0 7 854 523 208 152 15 chr17 35262944 35263076 -60009575 + B1_Mur4 SINE Alu 1 150 0 7 854 252 0 0 0 chr17 35265139 35265167 -60007484 + (T)n Simple_repeat Simple_repeat 1 28 0 7 854 1245 55 0 0 chr17 35265167 35265313 -60007338 - B1_Mus2 SINE Alu 0 147 2 7 854 986 139 114 82 chr17 35266194 35266413 -60006238 + URR1A DNA MER1_type 1 226 0 7 854 29 28 0 0 chr17 35266445 35266481 -60006170 + AT_rich Low_complexity Low_complexity 1 36 0 7 854 1272 65 71 0 chr17 35266551 35266720 -60005931 - B2_Mm2 SINE B2 -14 181 1 7 854 520 269 27 33 chr17 35266724 35266874 -60005777 - B1F2 SINE Alu 0 149 1 7 854 270 314 40 101 chr17 35267496 35267645 -60005006 + B1F1 SINE Alu 1 140 -9 7 854 268 293 0 51 chr17 35267652 35267731 -60004920 + ID4_ SINE ID 1 75 -8 7 854 243 0 0 0 chr17 35269083 35269110 -60003541 + (T)n Simple_repeat Simple_repeat 1 27 0 7 854 186 43 0 0 chr17 35269221 35269244 -60003407 + (TC)n Simple_repeat Simple_repeat 2 24 0 7 854 572 211 95 24 chr17 35269244 35269370 -60003281 - B1_Mur2 SINE Alu -14 135 1 7 854 1249 27 0 0 chr17 35269525 35269671 -60002980 + B1_Mus2 SINE Alu 2 147 0 7 854 209 45 0 154 chr17 35269671 35269703 -60002948 + A-rich Low_complexity Low_complexity 1 25 0 7 854 1059 71 42 14 chr17 35269703 35269845 -60002806 + B1_Mm SINE Alu 2 147 0 7 854 209 45 0 154 chr17 35269845 35269864 -60002787 + A-rich Low_complexity Low_complexity 26 44 0 7 854 963 86 0 7 chr17 35270122 35270262 -60002389 - B2_Mm2 SINE B2 -9 186 48 7 854 201 74 0 0 chr17 35270279 35270306 -60002345 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 854 1215 29 0 0 chr17 35270306 35270443 -60002208 - B1_Mus2 SINE Alu -10 137 1 7 854 1220 61 0 0 chr17 35270447 35270594 -60002057 - B1_Mus1 SINE Alu 0 148 2 7 854 473 235 0 0 chr17 35270814 35270912 -60001739 + PB1D9 SINE Alu 23 120 0 7 854 317 24 24 0 chr17 35271180 35271222 -60001429 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 7 854 1225 35 14 0 chr17 35271223 35271367 -60001284 - B1_Mus2 SINE Alu -1 146 1 7 854 1465 78 16 5 chr17 35271369 35271562 -60001089 - B2_Mm2 SINE B2 0 195 1 7 854 21 0 0 0 chr17 35273500 35273521 -59999130 + AT_rich Low_complexity Low_complexity 1 21 0 7 854 247 270 16 0 chr17 35273963 35274026 -59998625 - PB1D10 SINE Alu -41 76 13 7 854 23 0 0 0 chr17 35274067 35274090 -59998561 + AT_rich Low_complexity Low_complexity 1 23 0 7 854 329 265 24 0 chr17 35274275 35274358 -59998293 - B3 SINE B2 0 216 132 7 854 565 124 41 74 chr17 35274401 35274523 -59998128 - B1_Mm SINE Alu -29 118 1 7 854 398 229 27 18 chr17 35274523 35274556 -59998095 - ID SINE ID -144 80 47 7 854 216 185 19 0 chr17 35274530 35274584 -59998067 - B1_Mus2 SINE Alu 0 147 93 7 854 531 256 51 29 chr17 35274803 35274940 -59997711 - B1_Mur2 SINE Alu -5 144 5 7 854 717 282 36 31 chr17 35274943 35275137 -59997514 - B3A SINE B2 -1 197 3 7 854 297 0 0 0 chr17 35275144 35275177 -59997474 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 7 854 257 305 42 10 chr17 35276606 35276702 -59995949 - B1F SINE Alu -50 99 1 7 854 667 195 0 8 chr17 35276741 35276870 -59995781 - B1_Mur4 SINE Alu -21 129 2 7 854 242 57 57 0 chr17 35278274 35278327 -59994324 - Lx3_Mus LINE L1 -1 7008 6953 7 854 242 299 69 0 chr17 35280014 35280101 -59992550 + ID_B1 SINE B4 113 205 -19 7 854 233 208 0 13 chr17 35280306 35280384 -59992267 + (CCCCAG)n Simple_repeat Simple_repeat 4 80 0 7 854 835 243 11 11 chr17 35280768 35280951 -59991700 + B3 SINE B2 34 216 0 7 854 225 167 0 0 chr17 35281110 35281152 -59991499 + C-rich Low_complexity Low_complexity 1 42 0 7 854 186 118 0 0 chr17 35281990 35282024 -59990627 + (TCTG)n Simple_repeat Simple_repeat 1 34 0 7 854 487 126 162 19 chr17 35284597 35284702 -59987949 + ORR1B2 LTR MaLR 248 367 0 7 854 539 233 161 74 chr17 35284736 35285279 -59987372 + ORR1B2-int LTR MaLR 81 746 -624 7 854 1862 168 147 10 chr17 35285304 35285786 -59986865 + ORR1B2-int LTR MaLR 962 1509 0 7 854 295 206 71 71 chr17 35285786 35285885 -59986766 + ORR1B2 LTR MaLR 1 99 -268 7 854 24 53 0 0 chr17 35286020 35286058 -59986593 + AT_rich Low_complexity Low_complexity 1 38 0 7 854 1761 16 0 0 chr17 35287908 35288101 -59984550 + B2_Mm1a SINE B2 1 193 0 7 854 292 68 8 0 chr17 35288244 35288302 -59984349 + B1_Mur4 SINE Alu 89 150 0 7 854 192 77 0 0 chr17 35288308 35288334 -59984317 + (GA)n Simple_repeat Simple_repeat 2 27 0 7 854 267 279 11 23 chr17 35288334 35288422 -59984229 + ORR1B2 LTR MaLR 88 174 -205 7 854 239 347 24 48 chr17 35288431 35288555 -59984096 + B1_Mus1 SINE Alu 28 148 0 7 854 295 261 171 12 chr17 35288620 35288724 -59983927 + B3A SINE B2 84 198 0 7 854 1557 43 0 21 chr17 35288724 35288915 -59983736 + B2_Mm1t SINE B2 2 188 -5 7 854 221 267 104 40 chr17 35288915 35288935 -59983716 + B3 SINE B2 193 216 0 7 854 375 282 16 91 chr17 35288931 35289052 -59983599 + B3 SINE B2 6 117 -99 7 854 246 232 150 107 chr17 35289198 35289338 -59983313 + RSINE1 SINE B4 1 146 -19 7 854 578 163 197 31 chr17 35289394 35289521 -59983130 + B1_Mus1 SINE Alu 1 148 0 7 854 337 263 197 0 chr17 35289802 35289954 -59982697 + URR1A DNA MER1_type 45 226 0 7 854 186 43 0 0 chr17 35291233 35291256 -59981395 + (CAG)n Simple_repeat Simple_repeat 2 24 0 7 854 200 200 0 0 chr17 35292380 35292415 -59980236 + (CCA)n Simple_repeat Simple_repeat 1 35 0 7 854 276 100 0 0 chr17 35295071 35295111 -59977540 + (CTG)n Simple_repeat Simple_repeat 2 41 0 7 854 22 70 0 0 chr17 35301392 35301435 -59971216 + GC_rich Low_complexity Low_complexity 1 43 0 7 854 186 43 0 0 chr17 35301613 35301636 -59971015 + (CCG)n Simple_repeat Simple_repeat 2 24 0 7 854 704 267 77 92 chr17 35302770 35303042 -59969609 - B4A SINE B4 -23 269 2 7 854 797 203 71 66 chr17 35303054 35303265 -59969386 - B3 SINE B2 0 216 5 7 854 565 264 9 134 chr17 35303405 35303628 -59969023 + B4 SINE B4 98 292 0 7 854 906 133 39 50 chr17 35303959 35304141 -59968510 + B2_Mm2 SINE B2 15 194 -1 7 854 1070 82 13 46 chr17 35304433 35304586 -59968065 - B1_Mus1 SINE Alu 0 148 1 7 854 248 296 10 58 chr17 35305143 35305159 -59967492 + ID_B1 SINE B4 78 176 -48 7 854 472 182 11 0 chr17 35305159 35305247 -59967404 + B1_Mur2 SINE Alu 10 98 -51 7 854 877 257 9 23 chr17 35305274 35305489 -59967162 + B3 SINE B2 5 216 0 7 854 1445 70 38 0 chr17 35305719 35305904 -59966747 + B2_Mm2 SINE B2 1 192 -3 7 854 185 140 34 34 chr17 35306064 35306123 -59966528 + GA-rich Low_complexity Low_complexity 5 63 0 7 854 553 206 80 66 chr17 35306171 35306322 -59966329 + B3A SINE B2 38 190 -8 7 854 1740 21 0 0 chr17 35306344 35306536 -59966115 + B2_Mm1a SINE B2 1 192 -1 7 854 1157 61 0 13 chr17 35306561 35306699 -59965952 + B1_Mm SINE Alu 1 137 -10 7 854 243 0 0 0 chr17 35306699 35306726 -59965925 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 854 302 214 157 0 chr17 35307068 35307138 -59965513 - ID4 SINE ID -2 81 1 7 854 770 142 71 0 chr17 35307284 35307411 -59965240 + B1_Mus1 SINE Alu 1 136 -12 7 854 225 0 0 0 chr17 35307412 35307437 -59965214 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 7 854 680 174 56 35 chr17 35307604 35307747 -59964904 - B1_Mus1 SINE Alu -1 147 2 7 854 249 97 31 31 chr17 35309002 35309066 -59963585 + (CCCCAG)n Simple_repeat Simple_repeat 1 64 0 7 854 283 244 167 0 chr17 35309726 35309816 -59962835 - PB1 SINE Alu -11 116 12 7 854 397 238 9 37 chr17 35309915 35310024 -59962627 + PB1D10 SINE Alu 3 108 -9 7 854 689 308 106 40 chr17 35311092 35311471 -59961180 - MER21B LTR ERV1 -79 784 381 7 854 278 53 0 0 chr17 35311721 35311759 -59960892 + B1_Mur4 SINE Alu 108 145 -5 7 854 216 0 0 0 chr17 35311858 35311882 -59960769 + (T)n Simple_repeat Simple_repeat 1 24 0 7 854 1136 61 7 26 chr17 35311882 35312033 -59960618 - B1_Mus1 SINE Alu 0 148 1 8 854 378 0 0 0 chr17 35312058 35312100 -59960551 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 854 1105 35 21 7 chr17 35312130 35312273 -59960378 + B1_Mm SINE Alu 3 147 0 8 854 245 292 85 0 chr17 35312304 35312410 -59960241 + B1F SINE Alu 1 115 -34 8 854 325 293 51 36 chr17 35312450 35312588 -59960063 + RSINE1 SINE B4 16 155 -10 8 854 420 312 146 12 chr17 35312870 35313123 -59959528 + LTR33 LTR ERVL 32 318 -197 8 854 1385 104 10 10 chr17 35313146 35313340 -59959311 - B2_Mm2 SINE B2 0 195 2 8 854 368 252 136 0 chr17 35313352 35313455 -59959196 - ID_B1 SINE B4 0 224 108 8 854 269 287 26 122 chr17 35313455 35313467 -59959184 - PB1D7 SINE Alu 0 120 17 8 854 379 333 75 48 chr17 35313534 35313720 -59958931 - B3 SINE B2 -24 192 2 8 854 1210 97 80 0 chr17 35313730 35313905 -59958746 - B2_Mm2 SINE B2 -5 190 2 8 854 21 45 0 22 chr17 35314011 35314032 -59958619 + AT_rich Low_complexity Low_complexity 1 21 0 8 854 1245 41 0 7 chr17 35314032 35314180 -59958471 + B1_Mm SINE Alu 1 147 0 8 854 21 45 0 22 chr17 35314180 35314204 -59958447 + AT_rich Low_complexity Low_complexity 1 24 0 8 854 252 0 0 0 chr17 35314204 35314232 -59958419 + (TG)n Simple_repeat Simple_repeat 1 28 0 8 854 763 158 49 21 chr17 35314267 35314409 -59958242 + B1_Mur1 SINE Alu 2 147 -2 8 854 213 94 0 0 chr17 35314420 35314452 -59958199 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 8 854 1766 139 160 11 chr17 35314540 35314903 -59957748 + MTC LTR MaLR 5 421 0 8 854 993 224 28 9 chr17 35315251 35315463 -59957188 + B3 SINE B2 1 216 0 8 854 1008 220 9 23 chr17 35315975 35316189 -59956462 + B3 SINE B2 2 212 -4 8 854 651 243 14 28 chr17 35316238 35316382 -59956269 + RSINE1 SINE B4 9 150 -15 8 854 425 303 30 83 chr17 35316632 35316664 -59955987 + B4A SINE B4 64 221 -69 8 854 894 133 0 0 chr17 35316664 35316799 -59955852 + B1_Mur4 SINE Alu 10 144 -6 8 854 207 0 0 0 chr17 35316801 35316824 -59955827 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 854 314 121 336 9 chr17 35317714 35317821 -59954830 - B2_Mm2 SINE B2 -7 188 47 8 854 1086 54 195 0 chr17 35317853 35318002 -59954649 - B2_Mm1t SINE B2 -14 179 2 8 854 1108 109 0 0 chr17 35318055 35318202 -59954449 - B1_Mus1 SINE Alu -1 147 1 8 854 503 224 52 0 chr17 35318204 35318318 -59954333 - ID_B1 SINE B4 0 224 105 8 854 1074 72 39 0 chr17 35318318 35318471 -59954180 + B2_Mm2 SINE B2 2 160 -35 8 854 444 37 0 0 chr17 35318473 35318527 -59954124 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 8 854 268 187 261 11 chr17 35318540 35318632 -59954019 - ID_B1 SINE B4 -108 116 2 8 854 361 295 0 0 chr17 35318632 35318726 -59953925 - PB1D10 SINE Alu -23 94 1 8 854 1231 61 0 0 chr17 35318756 35318903 -59953748 + B1_Mus1 SINE Alu 2 148 0 8 854 1469 80 11 0 chr17 35318906 35319093 -59953558 + B2_Mm1t SINE B2 2 190 -3 8 854 460 285 28 7 chr17 35319405 35319550 -59953101 - B1F2 SINE Alu -1 148 1 8 854 24 32 0 0 chr17 35319558 35319589 -59953062 + AT_rich Low_complexity Low_complexity 1 31 0 8 854 241 109 196 0 chr17 35319593 35319639 -59953012 + B1F1 SINE Alu 91 145 -4 8 854 216 267 0 0 chr17 35319640 35319685 -59952966 + MER5A DNA MER1_type 145 189 0 8 854 218 286 0 0 chr17 35319852 35319908 -59952743 + B1F SINE Alu 89 144 -5 8 854 705 277 82 5 chr17 35319912 35320119 -59952532 + ID_B1 SINE B4 2 224 0 8 854 784 210 163 16 chr17 35320125 35320309 -59952342 + B3 SINE B2 1 211 -5 8 854 1319 82 5 21 chr17 35320312 35320499 -59952152 - B2_Mm2 SINE B2 -10 185 2 8 854 234 296 14 0 chr17 35320580 35320651 -59952000 + ID4_ SINE ID 8 79 -4 8 854 212 0 0 35 chr17 35320654 35320683 -59951968 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 8 854 396 0 0 0 chr17 35321854 35321898 -59950753 + (TC)n Simple_repeat Simple_repeat 1 44 0 8 854 306 0 0 0 chr17 35321898 35321931 -59950720 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 854 633 259 7 7 chr17 35322516 35322664 -59949987 - B4A SINE B4 -59 233 86 8 854 1155 105 0 11 chr17 35322706 35322880 -59949771 - B2_Mm2 SINE B2 -23 172 1 8 854 574 279 153 0 chr17 35322888 35323078 -59949573 - ID_B1 SINE B4 -3 221 3 8 854 289 322 0 62 chr17 35323257 35323449 -59949202 + CT-rich Low_complexity Low_complexity 1 180 0 8 854 336 352 0 0 chr17 35323379 35323521 -59949130 + C-rich Low_complexity Low_complexity 1 142 0 8 854 1268 21 0 14 chr17 35324181 35324318 -59948333 + B1_Mm SINE Alu 1 137 -10 8 854 198 0 0 0 chr17 35324318 35324340 -59948311 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 8 854 450 297 53 29 chr17 35324424 35324594 -59948057 - ID_B1 SINE B4 -4 220 47 8 854 636 105 36 255 chr17 35324693 35324885 -59947766 - B1_Mur4 SINE Alu 0 150 1 8 854 271 333 12 87 chr17 35324892 35325053 -59947598 - ID_B1 SINE B4 0 224 76 8 854 1221 54 0 20 chr17 35325524 35325675 -59946976 - B1_Mus1 SINE Alu 0 148 1 8 854 406 119 0 43 chr17 35325765 35325835 -59946816 + PB1D9 SINE Alu 53 119 -1 8 854 1266 27 0 7 chr17 35325835 35325982 -59946669 + B1_Mm SINE Alu 1 146 -1 8 854 216 182 0 0 chr17 35325982 35326026 -59946625 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 8 854 418 211 106 0 chr17 35326503 35326607 -59946044 - PB1D10 SINE Alu -2 115 1 8 854 28 48 0 0 chr17 35327581 35327623 -59945028 + AT_rich Low_complexity Low_complexity 1 42 0 8 854 438 294 60 102 chr17 35327627 35327892 -59944759 + B4A SINE B4 3 256 -36 8 854 594 118 0 0 chr17 35327914 35328007 -59944644 + (CA)n Simple_repeat Simple_repeat 2 94 0 8 854 741 247 71 121 chr17 35328074 35328143 -59944508 - RMER16 LTR ERVK 0 533 473 8 854 1190 82 0 0 chr17 35328143 35328290 -59944361 + B1_Mus2 SINE Alu 1 147 0 8 854 194 0 39 0 chr17 35328290 35328316 -59944335 + (CAA)n Simple_repeat Simple_repeat 2 28 0 8 854 741 231 67 109 chr17 35328316 35328663 -59943988 - RMER16 LTR ERVK -61 472 5 8 854 796 228 52 52 chr17 35328703 35328897 -59943754 - B3A SINE B2 0 198 5 8 854 896 156 142 90 chr17 35328931 35329092 -59943559 + URR1A DNA MER1_type 5 190 -36 8 854 1475 22 78 6 chr17 35329092 35329110 -59943541 - B2_Mm1a SINE B2 0 193 176 8 854 243 0 0 0 chr17 35329110 35329137 -59943514 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 8 854 1475 22 78 6 chr17 35329137 35329298 -59943353 - B2_Mm1a SINE B2 -18 175 2 8 854 896 156 142 90 chr17 35329298 35329347 -59943304 + URR1A DNA MER1_type 191 226 0 8 854 1376 87 22 0 chr17 35329408 35329592 -59943059 - B2_Mm2 SINE B2 -7 188 1 8 854 1180 35 14 21 chr17 35329617 35329762 -59942889 - B1_Mus1 SINE Alu 0 148 5 8 854 584 136 17 60 chr17 35329762 35329879 -59942772 - B1_Mus1 SINE Alu -1 147 36 8 854 285 212 47 59 chr17 35329803 35329888 -59942763 - MT2B LTR ERVL -337 264 181 8 854 643 265 107 0 chr17 35329896 35330092 -59942559 - ID_B1 SINE B4 0 224 8 8 854 264 30 0 0 chr17 35330642 35330675 -59941976 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 8 854 288 0 0 0 chr17 35330781 35330813 -59941838 + (GA)n Simple_repeat Simple_repeat 2 33 0 8 854 393 188 0 0 chr17 35330993 35331073 -59941578 + (TG)n Simple_repeat Simple_repeat 2 81 0 8 854 21 36 0 0 chr17 35333173 35333201 -59939450 + GC_rich Low_complexity Low_complexity 1 28 0 8 854 877 143 107 27 chr17 35333442 35333629 -59939022 + RMER4A LTR ERVK 258 459 -7 8 854 241 47 23 23 chr17 35333801 35333845 -59938806 + (TATG)n Simple_repeat Simple_repeat 1 44 0 8 854 657 0 0 0 chr17 35333846 35333919 -59938732 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 8 854 212 176 351 0 chr17 35333919 35333993 -59938658 - PB1D9 SINE Alu -13 107 8 8 854 693 0 0 0 chr17 35334414 35334491 -59938160 + (TTCTC)n Simple_repeat Simple_repeat 4 80 0 8 854 1385 67 6 11 chr17 35334491 35334673 -59937978 - B2_Mm1a SINE B2 -9 184 4 8 854 1138 83 6 6 chr17 35334673 35334842 -59937809 + (TTCTC)n Simple_repeat Simple_repeat 5 173 0 8 854 444 208 0 0 chr17 35334848 35334944 -59937707 + CT-rich Low_complexity Low_complexity 1 96 0 8 854 318 212 14 43 chr17 35334946 35335015 -59937636 - B1_Mus1 SINE Alu -69 79 13 8 854 272 259 23 58 chr17 35334947 35335033 -59937618 - ID_B1 SINE B4 -67 157 75 8 854 970 215 114 29 chr17 35335084 35335474 -59937177 + MER31A LTR ERV1 18 452 -14 8 854 324 0 0 0 chr17 35335486 35335522 -59937129 + (TTA)n Simple_repeat Simple_repeat 2 37 0 8 854 247 96 39 0 chr17 35336600 35336652 -59935999 + (TAAA)n Simple_repeat Simple_repeat 2 55 0 8 854 378 0 0 0 chr17 35339215 35339257 -59933394 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 854 849 20 0 0 chr17 35341823 35341922 -59930729 + (GA)n Simple_repeat Simple_repeat 2 100 0 8 854 294 27 0 0 chr17 35342707 35342730 -59929921 + (T)n Simple_repeat Simple_repeat 1 23 0 8 854 1273 34 0 7 chr17 35342730 35342879 -59929772 - B1_Mus1 SINE Alu 0 148 1 8 854 294 27 0 0 chr17 35342879 35342892 -59929759 + (T)n Simple_repeat Simple_repeat 1 13 0 8 854 1063 133 176 0 chr17 35343007 35343195 -59929456 + URR1B DNA MER1_type 1 221 -4 8 854 207 0 0 0 chr17 35343340 35343363 -59929288 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 854 1161 77 0 0 chr17 35343363 35343501 -59929150 - B1_Mus1 SINE Alu -4 144 7 8 854 893 234 25 0 chr17 35343658 35343855 -59928796 + B3 SINE B2 2 203 -13 9 854 642 261 193 6 chr17 35343955 35344136 -59928515 - B3 SINE B2 0 216 2 9 854 638 109 0 10 chr17 35344138 35344240 -59928411 + (TTTC)n Simple_repeat Simple_repeat 1 101 0 9 854 1165 68 7 7 chr17 35344258 35344406 -59928245 - B1_Mus1 SINE Alu 0 148 1 9 854 275 146 18 0 chr17 35344490 35344545 -59928106 + (CATATA)n Simple_repeat Simple_repeat 3 58 0 9 854 717 172 8 0 chr17 35344545 35344667 -59927984 - B1_Mur2 SINE Alu -12 137 15 9 854 420 322 87 12 chr17 35344690 35344863 -59927788 - MTD LTR MaLR -216 203 18 9 854 1217 54 7 0 chr17 35345788 35345935 -59926716 + B1_Mus1 SINE Alu 1 148 0 9 854 423 132 0 0 chr17 35345949 35346017 -59926634 + (GAAA)n Simple_repeat Simple_repeat 2 69 0 9 854 473 138 0 36 chr17 35346162 35346245 -59926406 - B1_Mur4 SINE Alu -5 145 66 9 854 600 283 124 20 chr17 35346551 35346753 -59925898 + ID_B1 SINE B4 2 224 0 9 854 216 266 31 0 chr17 35346804 35346868 -59925783 - ID4_ SINE ID -3 80 15 9 854 415 105 47 0 chr17 35347020 35347106 -59925545 + (CAGAGA)n Simple_repeat Simple_repeat 1 90 0 9 854 352 225 13 0 chr17 35347888 35347972 -59924679 + ID4 SINE ID 8 92 -60 9 854 325 190 0 0 chr17 35348387 35348445 -59924206 + B1_Mur4 SINE Alu 49 106 -44 9 854 1387 68 11 0 chr17 35348605 35348781 -59923870 + B2_Mm1t SINE B2 1 178 -15 9 854 433 40 0 13 chr17 35348824 35348923 -59923728 + B2_Mm2 SINE B2 47 180 -15 9 854 468 0 0 0 chr17 35348927 35348979 -59923672 + (GA)n Simple_repeat Simple_repeat 2 53 0 9 854 686 229 52 57 chr17 35349741 35349935 -59922716 + B3A SINE B2 1 193 -5 9 854 24 32 0 0 chr17 35350062 35350093 -59922558 + AT_rich Low_complexity Low_complexity 1 31 0 9 854 426 310 0 34 chr17 35350093 35350210 -59922441 - RSINE1 SINE B4 0 165 53 9 854 692 197 7 35 chr17 35350216 35350358 -59922293 + B1_Mur2 SINE Alu 2 139 -10 9 854 861 196 0 0 chr17 35350361 35350509 -59922142 - B1_Mus1 SINE Alu 0 148 1 9 854 642 162 0 0 chr17 35350559 35350676 -59921975 + CT-rich Low_complexity Low_complexity 4 120 0 9 854 1151 106 36 31 chr17 35350676 35350870 -59921781 - B2_Mm2 SINE B2 0 195 1 9 854 351 0 0 0 chr17 35350876 35350915 -59921736 + (TTCC)n Simple_repeat Simple_repeat 3 41 0 9 854 925 140 159 0 chr17 35350915 35351072 -59921579 - B2_Mm2 SINE B2 -13 182 1 9 854 323 326 35 48 chr17 35351094 35351112 -59921539 - B1F SINE Alu -6 143 1 9 854 399 315 47 0 chr17 35351112 35351239 -59921412 - ID_B1 SINE B4 -10 214 82 9 854 257 177 24 60 chr17 35351473 35351557 -59921094 + (CCCCAG)n Simple_repeat Simple_repeat 6 86 0 9 854 270 344 0 0 chr17 35352929 35353019 -59919632 + (TG)n Simple_repeat Simple_repeat 2 91 0 9 854 1010 96 7 0 chr17 35353086 35353221 -59919430 - B1_Mus1 SINE Alu -12 136 1 9 854 537 210 92 0 chr17 35353242 35353361 -59919290 - RSINE1 SINE B4 -2 163 34 9 854 705 82 0 0 chr17 35353383 35353480 -59919171 + (TTCC)n Simple_repeat Simple_repeat 3 99 0 9 854 758 265 48 39 chr17 35353487 35353695 -59918956 - B4A SINE B4 -77 215 6 9 854 1227 41 0 26 chr17 35353944 35354096 -59918555 + B1_Mus1 SINE Alu 1 148 0 9 854 1298 102 38 0 chr17 35354164 35354350 -59918301 + B2_Mm2 SINE B2 2 194 -1 9 854 1299 94 16 27 chr17 35358518 35358704 -59913947 - B2_Mm2 SINE B2 -10 185 2 9 854 551 165 190 0 chr17 35358799 35358920 -59913731 + B1F2 SINE Alu 6 149 0 9 854 424 279 0 38 chr17 35359643 35359859 -59912792 + (TG)n Simple_repeat Simple_repeat 1 207 0 9 854 320 293 0 26 chr17 35359919 35360073 -59912578 + (TG)n Simple_repeat Simple_repeat 2 151 0 9 854 321 68 0 0 chr17 35360350 35360394 -59912257 + (TG)n Simple_repeat Simple_repeat 2 45 0 9 854 281 232 95 24 chr17 35360394 35360478 -59912173 - B1F SINE Alu -11 138 49 9 854 225 246 46 0 chr17 35360573 35360638 -59912013 - PB1D10 SINE Alu -3 114 47 9 854 1192 81 23 0 chr17 35360894 35361066 -59911585 + B2_Mm2 SINE B2 6 181 -14 9 854 472 57 308 103 chr17 35361079 35361196 -59911455 + B2_Mm2 SINE B2 47 187 -8 9 854 489 162 18 124 chr17 35361210 35361323 -59911328 + B1_Mur3 SINE Alu 4 104 -45 9 854 1382 78 0 11 chr17 35361481 35361663 -59910988 - B2_Mm2 SINE B2 -14 181 2 9 854 542 136 0 13 chr17 35361767 35361876 -59910775 + B2_Mm1t SINE B2 89 192 -3 9 854 512 216 27 0 chr17 35361921 35362032 -59910619 - B3A SINE B2 -84 114 1 9 854 261 266 8 76 chr17 35363712 35363830 -59908821 + MER50-int LTR ERV1 3735 3844 -3361 9 854 600 255 27 33 chr17 35364151 35364301 -59908350 + B1_Mur2 SINE Alu 1 149 0 9 854 212 158 0 0 chr17 35364307 35364345 -59908306 + (ATG)n Simple_repeat Simple_repeat 3 40 0 9 854 895 75 0 0 chr17 35365383 35365503 -59907148 + B1_Mus2 SINE Alu 21 140 -7 9 854 432 281 26 41 chr17 35365827 35366018 -59906633 - B3 SINE B2 -2 214 2 9 854 297 89 0 0 chr17 35366189 35366234 -59906417 + (CA)n Simple_repeat Simple_repeat 1 45 0 9 854 366 268 20 20 chr17 35367104 35367203 -59905448 + B4A SINE B4 22 120 -172 9 854 267 322 86 82 chr17 35367236 35367379 -59905272 + B4A SINE B4 70 205 -87 9 854 1511 44 16 0 chr17 35367379 35367561 -59905090 + B2_Mm2 SINE B2 2 186 -9 9 854 267 322 86 82 chr17 35367561 35367637 -59905014 + B4A SINE B4 206 290 -2 9 854 511 212 110 0 chr17 35367982 35368100 -59904551 - ID_B1 SINE B4 -14 210 80 9 854 245 308 0 79 chr17 35367992 35368119 -59904532 - MT2B2 LTR ERVL -320 264 148 9 854 375 263 33 93 chr17 35368477 35368603 -59904048 + B1_Mur4 SINE Alu 9 135 -15 9 854 229 0 54 27 chr17 35368603 35368640 -59904011 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 9 854 375 263 33 93 chr17 35368640 35368664 -59903987 + B1_Mur4 SINE Alu 136 150 0 9 854 342 0 0 0 chr17 35368890 35368928 -59903723 + (CA)n Simple_repeat Simple_repeat 1 38 0 9 854 276 228 258 11 chr17 35371162 35371255 -59901396 + PB1D10 SINE Alu 2 117 0 9 854 1163 89 12 0 chr17 35371261 35371430 -59901221 + B2_Mm1t SINE B2 2 172 -21 9 854 228 213 0 0 chr17 35371458 35371505 -59901146 + B2_Mm2 SINE B2 58 104 -91 9 854 397 229 213 0 chr17 35371701 35371823 -59900828 - B1_Mur3 SINE Alu 0 149 2 9 854 205 167 0 0 chr17 35372321 35372374 -59900277 + (TTGGGG)n Simple_repeat Simple_repeat 1 53 0 9 854 180 0 0 0 chr17 35372476 35372496 -59900155 + (CAA)n Simple_repeat Simple_repeat 2 21 0 9 854 370 122 205 12 chr17 35372937 35373020 -59899631 + B1_Mur3 SINE Alu 40 140 -9 9 854 242 115 19 0 chr17 35373020 35373072 -59899579 + (CA)n Simple_repeat Simple_repeat 2 54 0 9 854 213 306 0 0 chr17 35374817 35374866 -59897785 + ID SINE ID 27 75 -149 9 854 345 339 25 51 chr17 35375077 35375273 -59897378 + MIRb SINE MIR 14 204 -64 9 854 452 169 8 0 chr17 35375964 35376094 -59896557 + (CAGA)n Simple_repeat Simple_repeat 2 132 0 9 854 755 173 28 63 chr17 35376094 35376236 -59896415 - B1_Mur2 SINE Alu -12 137 1 9 854 252 269 30 0 chr17 35376287 35376354 -59896297 + L2a LINE L2 3353 3421 -5 9 854 342 347 11 50 chr17 35376502 35376548 -59896103 - RMER15 LTR ERVL -4 571 528 9 854 1197 61 0 13 chr17 35376548 35376697 -59895954 + B1_Mus2 SINE Alu 1 147 0 9 854 342 347 11 50 chr17 35376697 35376832 -59895819 - RMER15 LTR ERVL -48 527 397 9 854 25 51 0 0 chr17 35378879 35378918 -59893733 + GC_rich Low_complexity Low_complexity 1 39 0 9 854 23 33 0 0 chr17 35379060 35379090 -59893561 + GC_rich Low_complexity Low_complexity 1 30 0 9 854 238 291 91 121 chr17 35380601 35380800 -59891851 - MLT1M LTR MaLR -386 286 94 9 854 254 241 66 93 chr17 35381797 35381948 -59890703 - B1F1 SINE Alu -1 148 2 9 854 298 193 68 57 chr17 35382285 35382373 -59890278 - B1_Mus2 SINE Alu -60 90 2 9 854 244 279 35 0 chr17 35382731 35382817 -59889834 + B1F SINE Alu 1 89 -60 9 854 378 174 78 39 chr17 35383719 35383821 -59888830 + PB1D9 SINE Alu 6 111 -9 9 854 677 281 10 34 chr17 35384429 35384635 -59888016 + B3 SINE B2 4 204 -12 9 854 630 185 43 29 chr17 35384642 35384781 -59887870 + B1_Mus1 SINE Alu 3 143 -5 9 854 498 279 16 0 chr17 35385087 35385099 -59887552 - B1_Mus2 SINE Alu -5 142 131 9 854 189 0 0 0 chr17 35385099 35385120 -59887531 + (TATG)n Simple_repeat Simple_repeat 2 22 0 9 854 498 279 16 0 chr17 35385120 35385229 -59887422 - B1_Mus2 SINE Alu -17 130 20 9 854 1217 55 0 0 chr17 35385241 35385387 -59887264 - B1_Mm SINE Alu 0 147 2 9 854 499 251 149 6 chr17 35385390 35385558 -59887093 - B3A SINE B2 -6 192 1 9 854 295 218 43 5 chr17 35385682 35385770 -59886881 - B1F1 SINE Alu -24 96 1 9 854 249 279 29 0 chr17 35385724 35385792 -59886859 - B4 SINE B4 -161 131 62 9 854 217 250 15 15 chr17 35386022 35386087 -59886564 + CT-rich Low_complexity Low_complexity 1 65 0 9 854 224 59 29 0 chr17 35387488 35387522 -59885129 + (GCCTG)n Simple_repeat Simple_repeat 3 37 0 9 854 1637 47 0 0 chr17 35388604 35388796 -59883855 - B2_Mm1a SINE B2 0 193 2 9 854 495 205 165 0 chr17 35389017 35389144 -59883507 + B1_Mur4 SINE Alu 3 150 0 9 854 556 189 83 38 chr17 35389156 35389288 -59883363 + B1_Mur3 SINE Alu 2 139 -10 9 855 574 253 104 35 chr17 35389442 35389643 -59883008 + B3 SINE B2 1 215 -1 9 855 453 90 0 0 chr17 35390313 35390380 -59882271 + (TG)n Simple_repeat Simple_repeat 2 68 0 9 855 420 111 0 0 chr17 35390926 35390989 -59881662 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 855 362 266 51 34 chr17 35391740 35391886 -59880765 - B3 SINE B2 0 216 71 1 855 910 140 32 29 chr17 35392053 35392248 -59880403 + MTC LTR MaLR 1 225 -196 1 855 395 245 51 41 chr17 35392321 35392419 -59880232 + B4A SINE B4 78 176 -116 1 855 666 99 0 11 chr17 35392336 35392428 -59880223 + B1_Mur3 SINE Alu 5 95 -54 1 855 1063 143 115 0 chr17 35392465 35392647 -59880004 + MTC LTR MaLR 209 411 -10 1 855 1145 196 10 20 chr17 35392895 35393098 -59879553 + B3 SINE B2 1 201 -15 1 855 316 221 73 0 chr17 35393154 35393222 -59879429 + B3 SINE B2 138 210 -6 1 855 719 280 69 0 chr17 35393231 35393406 -59879245 + B3 SINE B2 9 195 -21 1 855 333 68 0 0 chr17 35393736 35393780 -59878871 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 855 1146 35 21 7 chr17 35393801 35393945 -59878706 + B1_Mus2 SINE Alu 2 147 0 1 855 321 26 0 0 chr17 35393951 35393989 -59878662 + (GA)n Simple_repeat Simple_repeat 2 39 0 1 855 237 98 0 0 chr17 35393989 35394029 -59878622 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 855 396 287 0 0 chr17 35394040 35394197 -59878454 + (TG)n Simple_repeat Simple_repeat 1 157 0 1 855 984 100 13 13 chr17 35394407 35394559 -59878092 + MTC LTR MaLR 260 411 -10 1 855 933 92 15 8 chr17 35394577 35394709 -59877942 + B2_Mm2 SINE B2 56 188 -7 1 855 1037 67 87 41 chr17 35394705 35394877 -59877774 + ORR1A2 LTR MaLR 148 327 0 1 855 280 272 32 11 chr17 35394877 35394970 -59877681 - RMER15 LTR ERVL -157 418 324 1 855 211 293 52 0 chr17 35395034 35395092 -59877559 - B1_Mur3 SINE Alu -53 96 36 1 855 1270 34 0 0 chr17 35395387 35395533 -59877118 + B1_Mus1 SINE Alu 3 148 0 1 855 1374 47 65 0 chr17 35395636 35395805 -59876846 - B2_Mm2 SINE B2 -14 181 2 1 855 606 165 70 63 chr17 35395847 35395989 -59876662 + B1_Mur3 SINE Alu 6 148 -1 1 855 279 0 0 0 chr17 35395991 35396022 -59876629 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 855 414 98 0 0 chr17 35396064 35396125 -59876526 - B2_Mm2 SINE B2 -134 61 1 1 855 693 196 127 18 chr17 35396126 35396292 -59876359 - ORR1B1 LTR MaLR -170 224 41 1 855 526 260 53 7 chr17 35396302 35396453 -59876198 + RMER15 LTR ERVL 418 575 0 1 855 877 346 73 54 chr17 35397064 35397196 -59875455 + MERVK26-int LTR ERVK 3627 3758 -3161 1 855 1122 51 0 0 chr17 35397196 35397333 -59875318 + B1_Mus2 SINE Alu 1 137 -10 1 855 877 346 73 54 chr17 35397333 35398638 -59874013 + MERVK26-int LTR ERVK 3759 5091 -1828 1 855 30 0 0 0 chr17 35400724 35400754 -59871897 + GC_rich Low_complexity Low_complexity 1 30 0 1 855 207 0 0 0 chr17 35401651 35401674 -59870977 + (TC)n Simple_repeat Simple_repeat 2 24 0 1 855 769 73 92 0 chr17 35401681 35401790 -59870861 - B1_Mur4 SINE Alu -5 145 27 1 855 306 242 152 91 chr17 35401682 35401814 -59870837 - B4 SINE B4 -72 220 81 1 855 1280 63 81 0 chr17 35404127 35404301 -59868350 + B2_Mm2 SINE B2 3 190 -5 1 855 3196 168 87 144 chr17 35404934 35405886 -59866765 - RMER19B LTR ERVK -4 898 1 1 855 1323 71 37 27 chr17 35405936 35406123 -59866528 - B2_Mm2 SINE B2 -6 189 1 1 855 270 293 0 39 chr17 35406379 35406457 -59866194 - RMER6B LTR ERVK -17 444 370 1 855 351 0 0 0 chr17 35406742 35406781 -59865870 + (GA)n Simple_repeat Simple_repeat 1 39 0 1 855 2004 161 81 44 chr17 35406864 35407274 -59865377 - RMER21A LTR ERV1 -522 425 1 1 855 333 281 24 95 chr17 35407274 35407347 -59865304 + MTEa LTR MaLR 303 368 -11 1 855 1048 194 279 3 chr17 35407347 35407637 -59865014 - ORR1D2 LTR MaLR 0 370 1 1 855 333 281 24 95 chr17 35407637 35407649 -59865002 + MTEa LTR MaLR 369 379 0 1 855 181 269 71 87 chr17 35407671 35407694 -59864957 - L4 LINE RTE -891 1138 1118 1 855 2670 156 114 19 chr17 35407694 35408212 -59864439 - RMER2 LTR ERV1 0 567 1 1 855 181 269 71 87 chr17 35408212 35408314 -59864337 - L4 LINE RTE -912 1117 1015 1 855 768 262 0 0 chr17 35408412 35408572 -59864079 + RSINE1 SINE B4 2 161 -4 1 855 2085 100 68 134 chr17 35408615 35409055 -59863596 - RLTR9F LTR ERVK -4 411 1 1 855 483 255 78 7 chr17 35409305 35409447 -59863204 - RSINE1 SINE B4 -11 154 3 1 855 296 312 31 20 chr17 35409447 35409545 -59863106 - ID_B1 SINE B4 -119 105 7 1 855 1981 233 41 118 chr17 35409722 35410384 -59862267 + RMER19C LTR ERVK 1 611 0 1 855 735 237 83 16 chr17 35410666 35410859 -59861792 + B3 SINE B2 1 206 -10 1 855 32 26 0 0 chr17 35411161 35411200 -59861451 + AT_rich Low_complexity Low_complexity 1 39 0 1 855 1302 106 17 0 chr17 35411200 35411380 -59861271 + B2_Mm2 SINE B2 3 185 -10 1 855 465 238 274 0 chr17 35411389 35411553 -59861098 - B3 SINE B2 -6 210 2 1 855 486 33 0 0 chr17 35411584 35411644 -59861007 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 855 369 196 217 0 chr17 35412242 35412334 -59860317 + B1_Mur2 SINE Alu 19 130 -19 1 855 308 275 100 9 chr17 35412614 35412724 -59859927 - ID_B1 SINE B4 -25 199 80 1 855 802 166 0 58 chr17 35412746 35412900 -59859751 + B1_Mus1 SINE Alu 2 146 -2 1 855 1315 106 75 0 chr17 35412918 35413117 -59859534 + URR1B DNA MER1_type 12 225 0 1 855 3114 104 62 17 chr17 35413461 35413941 -59858710 + RLTR44C LTR ERVK 1 502 0 1 855 617 133 8 34 chr17 35413963 35414080 -59858571 + RLTR44-int LTR ERVK 136 249 -2563 1 855 1855 95 109 7 chr17 35414089 35414662 -59857989 + RLTR44-int LTR ERVK 816 1332 -1480 1 855 538 287 26 56 chr17 35414745 35415014 -59857637 + IAPEz-int LTR ERVK 3423 3683 -2798 1 855 314 27 0 0 chr17 35415025 35415062 -59857589 + RLTR44-int LTR ERVK 2244 2280 -532 1 855 270 324 80 33 chr17 35416300 35416450 -59856201 + Charlie4z DNA MER1_type 9 165 -2 1 855 1228 82 21 42 chr17 35416456 35416646 -59856005 + B2_Mm2 SINE B2 2 187 -8 1 855 2844 108 8 5 chr17 35417287 35417689 -59854962 + RLTR9D LTR ERVK 1 403 0 1 855 262 365 101 40 chr17 35417979 35418207 -59854444 + MER44B DNA MER2_type 22 263 -287 1 855 2726 37 12 0 chr17 35418372 35418700 -59853951 - IAPEY_LTR LTR ERVK 0 385 54 1 855 246 310 113 40 chr17 35418699 35418850 -59853801 + MER44B DNA MER2_type 389 550 0 1 855 4447 96 5 26 chr17 35418933 35419575 -59853076 - RLTR5_Mm LTR ERV1 0 628 1 1 855 439 326 14 7 chr17 35419665 35419813 -59852838 + ID_B1 SINE B4 71 219 -5 1 855 318 310 51 119 chr17 35420659 35420835 -59851816 + B3 SINE B2 1 164 -52 1 855 257 229 45 57 chr17 35420831 35420919 -59851732 + Kanga1 DNA Tc2 491 577 -1168 1 855 1679 197 8 39 chr17 35420968 35421353 -59851298 - BGLII_B LTR ERVK -10 431 59 1 855 1359 52 6 33 chr17 35421757 35421937 -59850714 - B2_Mm1a SINE B2 -18 175 1 1 855 339 231 42 42 chr17 35421944 35422005 -59850646 - L1MEg LINE L1 -4130 1954 1891 1 855 1146 76 0 0 chr17 35422005 35422149 -59850502 - B1_Mm SINE Alu -2 145 2 1 855 339 231 42 42 chr17 35422149 35422182 -59850469 - L1MEg LINE L1 -4194 1890 1860 1 855 350 23 0 43 chr17 35422188 35422234 -59850417 - tRNA-Thr-ACY_ tRNA tRNA -33 44 1 1 855 5696 189 58 1 chr17 35423023 35423635 -59849016 - MurERV4-int LTR ERVK -80 5180 4526 1 855 279 0 0 0 chr17 35423635 35423666 -59848985 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 1 855 3214 65 8 0 chr17 35423671 35424068 -59848583 + MTB LTR MaLR 1 400 0 1 855 5696 189 58 1 chr17 35424068 35424552 -59848099 - MurERV4-int LTR ERVK -742 4518 4032 1 855 560 14 14 0 chr17 35424552 35424621 -59848030 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 855 5696 189 58 1 chr17 35424621 35424696 -59847955 - MurERV4-int LTR ERVK -1229 4031 3937 1 855 1274 158 68 12 chr17 35424696 35424943 -59847708 + RMER19B LTR ERVK 670 898 -4 1 855 982 113 0 45 chr17 35424943 35425119 -59847532 + L1Md_F2 LINE L1 6415 6582 0 1 855 1336 165 45 0 chr17 35425128 35425395 -59847256 + RodERV21-int LTR ERV1 174 452 -4539 1 855 2668 191 58 30 chr17 35425442 35426112 -59846539 + RodERV21-int LTR ERV1 303 991 -4000 1 855 393 252 117 15 chr17 35426618 35426755 -59845896 + RodERV21-int LTR ERV1 1004 1154 -3837 1 855 4705 203 25 31 chr17 35426747 35427794 -59844857 + RodERV21-int LTR ERV1 1537 2577 -2414 1 855 558 250 183 4 chr17 35427798 35427963 -59844688 + MTD LTR MaLR 123 304 -103 1 855 952 166 21 5 chr17 35427964 35428152 -59844499 - MERVL_2A-int LTR ERVL -183 5578 5388 1 855 419 299 41 55 chr17 35428160 35428379 -59844272 - RLTR15 LTR ERVK -19 340 125 1 855 4233 211 68 41 chr17 35428379 35428935 -59843716 - MERVL_2A-int LTR ERVL -361 5400 4797 1 855 228 67 0 0 chr17 35428935 35428965 -59843686 + (ATG)n Simple_repeat Simple_repeat 1 30 0 1 855 4233 211 68 41 chr17 35428965 35429548 -59843103 - MERVL_2A-int LTR ERVL -965 4796 4231 1 855 1941 178 22 32 chr17 35429549 35429950 -59842701 + ORR1C1-int LTR MaLR 1113 1509 0 1 855 534 168 36 27 chr17 35429951 35430061 -59842590 + ORR1C1 LTR MaLR 2 112 -266 1 855 2812 134 268 7 chr17 35430092 35430294 -59842357 - RMER19A LTR ERVK 0 737 533 1 855 180 0 0 0 chr17 35430294 35430314 -59842337 + (CAGTC)n Simple_repeat Simple_repeat 1 20 0 1 855 2812 143 252 9 chr17 35430314 35430717 -59841934 - RMER19A LTR ERVK -205 532 8 1 855 3805 197 79 47 chr17 35430777 35431794 -59840857 + MYSERV6-int LTR ERVK 7848 8896 -63 1 855 25 0 0 0 chr17 35431794 35431819 -59840832 + AT_rich Low_complexity Low_complexity 1 25 0 1 855 194 62 0 30 chr17 35431840 35431873 -59840778 + (TTAA)n Simple_repeat Simple_repeat 1 32 0 1 855 442 314 54 22 chr17 35432096 35432373 -59840278 + RLTR15 LTR ERVK 42 327 -32 1 855 438 180 60 51 chr17 35432378 35432495 -59840156 - MT2B LTR ERVL -205 396 279 1 855 301 184 112 50 chr17 35432567 35432647 -59840004 - MT2B LTR ERVL -418 115 31 1 855 588 173 192 93 chr17 35433427 35433599 -59839052 - B3 SINE B2 -4 191 3 1 855 1306 228 108 3 chr17 35433899 35434234 -59838417 + ORR1D1 LTR MaLR 1 370 -4 1 855 276 252 45 98 chr17 35434238 35434370 -59838281 + ID_B1 SINE B4 87 211 -13 1 855 279 0 0 0 chr17 35434370 35434401 -59838250 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 855 1137 62 0 20 chr17 35434738 35434887 -59837764 - B1_Mus2 SINE Alu -1 146 1 1 855 303 344 116 41 chr17 35434965 35435339 -59837312 + Tigger7 DNA MER2_type 2207 2483 -8 1 855 270 81 0 0 chr17 35435426 35435463 -59837188 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 855 560 336 0 0 chr17 35435803 35435952 -59836699 + RSINE1 SINE B4 13 161 -4 1 855 537 237 50 8 chr17 35436252 35436371 -59836280 - RSINE1 SINE B4 -39 126 3 1 855 230 333 0 25 chr17 35436391 35436471 -59836180 - ID4_ SINE ID 0 83 6 1 855 1737 250 51 107 chr17 35436653 35437298 -59835353 + RMER19C LTR ERVK 3 611 0 1 855 670 236 116 40 chr17 35437580 35437743 -59834908 + B3 SINE B2 1 180 -36 1 855 3520 32 0 132 chr17 35437743 35438245 -59834406 + RLTR10C LTR ERVK 1 436 0 1 855 670 236 116 40 chr17 35438245 35438280 -59834371 + B3 SINE B2 181 214 -2 1 855 882 185 49 5 chr17 35438589 35438774 -59833877 - B2_Mm2 SINE B2 -1 194 2 1 855 322 228 217 0 chr17 35439458 35439550 -59833101 + B1_Mur2 SINE Alu 19 130 -19 1 855 271 306 171 16 chr17 35439818 35439941 -59832710 - ID_B1 SINE B4 -3 221 80 1 855 879 149 35 0 chr17 35439963 35440104 -59832547 + B1_Mus1 SINE Alu 2 147 -1 1 855 903 154 217 0 chr17 35440136 35440311 -59832340 + URR1B DNA MER1_type 13 225 0 1 855 274 316 81 50 chr17 35443377 35443537 -59829114 + Charlie4z DNA MER1_type 1 165 -2 1 855 1382 50 26 42 chr17 35443543 35443736 -59828915 + B2_Mm2 SINE B2 2 191 -4 1 855 321 330 96 42 chr17 35444637 35444877 -59827774 + Tigger7 DNA MER2_type 11 263 -2228 1 855 345 325 179 27 chr17 35444890 35445187 -59827464 + Tigger7 DNA MER2_type 2150 2491 0 1 855 390 321 28 7 chr17 35445358 35445499 -59827152 + ID_B1 SINE B4 71 214 -10 1 855 440 304 34 107 chr17 35446376 35446553 -59826098 + B3 SINE B2 1 164 -52 1 855 238 289 35 46 chr17 35446550 35446637 -59826014 + Kanga1 DNA Tc2 492 577 -1168 1 855 1909 220 2 61 chr17 35446673 35446846 -59825805 - BGLII_B LTR ERVK -9 432 267 1 855 1413 50 0 0 chr17 35446846 35447143 -59825508 + (TCC)n Simple_repeat Simple_repeat 1 297 0 1 855 1909 220 2 61 chr17 35447143 35447427 -59825224 - BGLII_B LTR ERVK -175 266 2 1 855 252 287 52 0 chr17 35447481 35447596 -59825055 + Kanga1 DNA Tc2 1359 1479 -266 1 855 1889 166 38 16 chr17 35448018 35448385 -59824266 + ORR1C2 LTR MaLR 9 383 -1 1 855 493 251 246 0 chr17 35448839 35449042 -59823609 + RodERV21-int LTR ERV1 12 264 -4727 1 855 7133 164 31 28 chr17 35449728 35451482 -59821169 + MYSERV6-int LTR ERVK 6559 8242 -717 1 855 720 103 0 0 chr17 35451482 35451589 -59821062 + (TTTC)n Simple_repeat Simple_repeat 3 109 0 1 855 3279 148 132 89 chr17 35451589 35451765 -59820886 + MYSERV6-int LTR ERVK 8243 8442 -517 1 855 187 290 65 0 chr17 35451765 35451827 -59820824 - L2 LINE L2 -3266 153 88 1 855 3279 148 132 89 chr17 35451827 35452280 -59820371 + MYSERV6-int LTR ERVK 8443 8959 0 1 855 1461 166 228 24 chr17 35452281 35452529 -59820122 + RMER6B LTR ERVK 2 320 -141 1 855 594 41 0 0 chr17 35452529 35452602 -59820049 + (GGA)n Simple_repeat Simple_repeat 1 73 0 1 855 1461 166 228 24 chr17 35452602 35452735 -59819916 + RMER6B LTR ERVK 321 461 0 1 855 296 200 37 74 chr17 35452950 35453085 -59819566 + MYSERV-int LTR ERVK 5346 5475 -1075 1 855 23 0 0 0 chr17 35453099 35453122 -59819529 + AT_rich Low_complexity Low_complexity 1 23 0 1 855 647 211 8 0 chr17 35453316 35453439 -59819212 - B3 SINE B2 -90 126 3 1 855 1830 246 124 122 chr17 35453567 35453732 -59818919 + RLTR19-int LTR ERVK 2184 2364 -3773 1 855 1232 89 33 22 chr17 35453732 35453915 -59818736 + B2_Mm2 SINE B2 1 185 -10 1 855 1830 254 118 109 chr17 35453915 35456012 -59816639 + RLTR19-int LTR ERVK 2365 3962 -2175 1 855 1665 227 34 22 chr17 35456827 35457241 -59815410 + MTD LTR MaLR 1 419 0 1 855 306 206 0 0 chr17 35459036 35459104 -59813547 + T-rich Low_complexity Low_complexity 1 68 0 1 855 293 274 77 82 chr17 35461952 35462147 -59810504 + RLTR13C1 LTR ERVK 667 978 0 1 855 1242 91 37 16 chr17 35463304 35463494 -59809157 + B2_Mm2 SINE B2 2 195 0 1 855 530 190 20 10 chr17 35463878 35463979 -59808672 - RMER21A LTR ERV1 -522 425 324 1 855 1142 164 150 118 chr17 35463982 35464476 -59808175 - RMER17B LTR ERVK -138 671 164 1 855 407 303 29 99 chr17 35464543 35464715 -59807936 + B3A SINE B2 1 160 -38 1 855 321 227 121 40 chr17 35464714 35464838 -59807813 + Kanga1 DNA Tc2 489 622 -1123 1 855 1474 211 19 110 chr17 35464861 35464900 -59807751 - BGLII_A LTR ERVK -14 431 397 1 855 1119 151 11 5 chr17 35464900 35465087 -59807564 + B2_Mm1t SINE B2 1 188 -5 1 855 1474 211 19 110 chr17 35465087 35465521 -59807130 - BGLII_A LTR ERVK -49 396 1 1 855 225 302 16 0 chr17 35465826 35465889 -59806762 + L1M2a LINE L1 1423 1486 -5682 1 855 1608 163 39 20 chr17 35466119 35466425 -59806226 + ORR1C2 LTR MaLR 9 320 -64 1 855 586 99 0 0 chr17 35466420 35466501 -59806150 - B1_Mus2 SINE Alu -66 81 1 1 855 10255 179 35 65 chr17 35466580 35468831 -59803820 + MYSERV6-int LTR ERVK 6556 8745 -214 1 855 1978 75 0 0 chr17 35468831 35469085 -59803566 + L1_Mus1 LINE L1 6313 6566 -1 1 855 10255 179 35 65 chr17 35469085 35469312 -59803339 + MYSERV6-int LTR ERVK 8746 8959 0 1 855 1016 180 229 8 chr17 35469312 35469570 -59803081 + RMER6B LTR ERVK 1 315 -146 1 855 1763 189 71 3 chr17 35469877 35470095 -59802556 + ORR1C2 LTR MaLR 9 234 -150 1 855 186 43 0 0 chr17 35470095 35470118 -59802533 + (CCTG)n Simple_repeat Simple_repeat 4 26 0 1 855 1763 189 71 3 chr17 35470118 35470250 -59802401 + ORR1C2 LTR MaLR 235 383 -1 1 855 505 287 109 0 chr17 35470702 35470876 -59801775 + RodERV21-int LTR ERV1 12 204 -4787 1 855 4557 143 34 18 chr17 35471603 35472791 -59799860 + MYSERV6-int LTR ERVK 6556 7888 -1071 1 855 534 168 8 35 chr17 35474011 35474193 -59798458 + MYSERV6-int LTR ERVK 7813 7905 -1054 1 855 4572 173 99 25 chr17 35474194 35475269 -59797382 + MYSERV6-int LTR ERVK 7805 8959 0 1 855 1308 257 47 64 chr17 35475269 35475738 -59796913 + RMER6B LTR ERVK 1 461 0 1 855 357 227 205 58 chr17 35475767 35475904 -59796747 + RLTR42-int LTR ERVK 1639 1794 -3728 1 855 684 202 25 15 chr17 35476269 35476427 -59796224 - B3 SINE B2 -36 159 4 1 855 385 166 257 20 chr17 35476555 35476703 -59795948 + RLTR42-int LTR ERVK 1870 2052 -3470 1 855 1020 280 84 51 chr17 35476733 35477261 -59795390 + RLTR19-int LTR ERVK 2411 2890 -3247 1 855 325 0 44 0 chr17 35477261 35477306 -59795345 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1 855 1144 52 0 0 chr17 35477308 35477444 -59795207 - B1_Mus1 SINE Alu -11 137 2 1 855 837 290 84 79 chr17 35477444 35477545 -59795106 + RLTR19-int LTR ERVK 6148 6255 -295 1 855 1456 244 41 22 chr17 35478593 35479004 -59793647 + MTD LTR MaLR 1 419 0 1 855 220 254 0 31 chr17 35480911 35480976 -59791675 + T-rich Low_complexity Low_complexity 2 64 0 1 855 334 244 65 55 chr17 35483615 35483810 -59788841 + RLTR13D3 LTR ERVK 983 1073 -41 1 855 1244 109 38 0 chr17 35484924 35485107 -59787544 + B2_Mm2 SINE B2 2 191 -4 1 855 591 157 0 38 chr17 35485468 35485574 -59787077 - RMER21A LTR ERV1 -522 425 324 1 855 1298 180 154 30 chr17 35485577 35486046 -59786605 - RMER17A2 LTR ERVK -138 671 190 1 855 320 314 41 111 chr17 35486113 35486285 -59786366 + B3A SINE B2 1 160 -38 1 855 310 227 121 40 chr17 35486284 35486408 -59786243 + Kanga1 DNA Tc2 489 622 -1123 1 855 935 221 0 84 chr17 35486423 35486466 -59786185 - BGLII_B LTR ERVK -10 431 397 1 855 1148 134 11 5 chr17 35486466 35486653 -59785998 + B2_Mm1t SINE B2 1 188 -5 1 855 1354 185 4 60 chr17 35486653 35487122 -59785529 - BGLII_B LTR ERVK -45 396 1 1 855 1688 159 67 20 chr17 35487713 35488071 -59784580 + ORR1C2 LTR MaLR 9 383 -1 1 855 430 262 31 16 chr17 35488519 35488647 -59784004 + RodERV21-int LTR ERV1 12 141 -4850 1 855 3495 150 57 5 chr17 35489403 35490014 -59782637 + MYSERV6-int LTR ERVK 6556 7198 -1761 1 855 3435 180 54 9 chr17 35490013 35490679 -59781972 + MYSERV6-int LTR ERVK 8264 8959 0 1 855 1253 220 49 110 chr17 35490679 35491170 -59781481 + RMER6B LTR ERVK 1 461 0 1 855 182 234 175 38 chr17 35491186 35491266 -59781385 - L3 LINE CR1 -315 4174 4084 1 855 344 185 40 56 chr17 35491400 35491526 -59781125 + MYSERV-int LTR ERVK 5352 5475 -1075 1 855 23 0 0 0 chr17 35491540 35491563 -59781088 + AT_rich Low_complexity Low_complexity 1 23 0 1 855 689 203 8 0 chr17 35491757 35491880 -59780771 - B3 SINE B2 -90 126 3 1 855 663 178 107 49 chr17 35491993 35492169 -59780482 + RLTR19-int LTR ERVK 1861 2055 -3467 1 855 1288 83 27 16 chr17 35492169 35492353 -59780298 + B2_Mm2 SINE B2 1 186 -9 1 855 663 178 107 49 chr17 35492353 35492419 -59780232 + RLTR19-int LTR ERVK 2056 2117 -3405 1 855 1751 256 115 109 chr17 35492413 35494454 -59778197 + RLTR19-int LTR ERVK 2411 3962 -2175 1 855 1667 229 31 22 chr17 35495258 35495673 -59776978 + MTD LTR MaLR 1 419 0 1 855 22 0 0 0 chr17 35496610 35496632 -59776019 + GC_rich Low_complexity Low_complexity 1 22 0 1 855 14130 51 7 4 chr17 35497164 35499716 -59772935 - L1Md_F2 LINE L1 0 6582 4104 1 855 745 249 32 13 chr17 35499783 35499998 -59772653 + ORR1D1 LTR MaLR 1 221 -149 1 855 2190 82 0 73 chr17 35500000 35500328 -59772323 - RLTR10D LTR ERVK -55 304 1 1 855 36023 17 6 0 chr17 35500328 35504294 -59768357 - IAP-d-int LTR ERVK 0 6542 2555 1 855 3026 15 0 3 chr17 35504294 35504632 -59768019 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 855 56677 21 17 7 chr17 35504632 35511041 -59761610 + IAPEz-int LTR ERVK 8 6481 0 2 855 3026 15 0 3 chr17 35511041 35511379 -59761272 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 855 22627 22 10 0 chr17 35511379 35513906 -59758745 - IAP-d-int LTR ERVK -3982 2560 8 1 855 2580 89 0 68 chr17 35513913 35514298 -59758353 - RLTR10D LTR ERVK 0 359 1 3 855 613 206 203 16 chr17 35514298 35514477 -59758174 + ORR1D1 LTR MaLR 159 373 -1 4 855 482 226 138 46 chr17 35514478 35514507 -59758144 + B1_Mm SINE Alu 6 34 -113 5 855 2126 144 88 3 chr17 35514507 35514870 -59757781 + ORR1B1 LTR MaLR 1 394 0 6 855 482 226 138 46 chr17 35514870 35514970 -59757681 + B1_Mm SINE Alu 35 147 0 5 855 273 29 0 0 chr17 35514971 35515005 -59757646 + (A)n Simple_repeat Simple_repeat 1 34 0 7 855 280 353 102 79 chr17 35515405 35515799 -59756852 + MER44B DNA MER2_type 140 542 -8 8 855 810 0 0 0 chr17 35518151 35518241 -59754410 + (TTC)n Simple_repeat Simple_repeat 1 90 0 9 855 621 0 0 0 chr17 35518243 35518312 -59754339 + (TC)n Simple_repeat Simple_repeat 2 70 0 1 855 1125 64 0 0 chr17 35518316 35518456 -59754195 - B1_Mm SINE Alu -6 141 2 1 855 234 287 148 32 chr17 35519205 35519360 -59753291 + MLT2F LTR ERVL 276 448 -215 1 855 1069 82 0 26 chr17 35519409 35519560 -59753091 - B1_Mm SINE Alu 0 147 1 1 855 279 133 0 0 chr17 35519570 35519615 -59753036 + (T)n Simple_repeat Simple_repeat 1 45 0 1 855 1023 110 14 0 chr17 35519625 35519771 -59752880 - B1_Mus1 SINE Alu 0 148 1 1 856 3418 180 114 113 chr17 35521072 35521298 -59751353 + RMER19B LTR ERVK 1 169 -733 1 856 2431 32 0 0 chr17 35521298 35521580 -59751071 + L1Md_A LINE L1 6301 6582 0 1 856 3418 180 114 113 chr17 35521580 35522254 -59750397 + RMER19B LTR ERVK 170 902 0 1 856 2350 220 10 6 chr17 35522278 35522776 -59749875 + MYSERV-int LTR ERVK 5345 5844 -706 1 856 2134 111 9 47 chr17 35522776 35522831 -59749820 + ORR1A2 LTR MaLR 1 56 -271 1 856 1136 78 0 0 chr17 35522831 35522973 -59749678 + B1_Mus1 SINE Alu 1 142 -6 2 856 1005 9 0 0 chr17 35522975 35523089 -59749562 + (GAA)n Simple_repeat Simple_repeat 2 115 0 2 856 2134 111 9 47 chr17 35523089 35523370 -59749281 + ORR1A2 LTR MaLR 57 327 0 1 856 7061 162 228 16 chr17 35523376 35524984 -59747667 + ORR1A2-int LTR MaLR 16 1963 0 1 856 2429 87 19 3 chr17 35524984 35525306 -59747345 + ORR1A2 LTR MaLR 1 327 0 1 856 2716 177 48 53 chr17 35525307 35525934 -59746717 + MYSERV6-int LTR ERVK 8273 8896 -63 2 856 36 91 0 0 chr17 35525941 35526040 -59746611 + AT_rich Low_complexity Low_complexity 1 99 0 2 856 649 267 51 41 chr17 35526192 35526485 -59746166 + RLTR15 LTR ERVK 32 327 -32 2 856 477 205 95 16 chr17 35526490 35526646 -59746005 - MT2B LTR ERVL -202 399 277 2 856 584 216 141 31 chr17 35527428 35527619 -59745032 - B3 SINE B2 -2 214 3 2 856 1249 213 127 9 chr17 35527920 35528251 -59744400 + ORR1D1 LTR MaLR 1 370 -4 2 856 458 225 33 75 chr17 35528255 35528284 -59744367 + PB1D9 SINE Alu 6 34 -86 2 856 1868 144 80 130 chr17 35528284 35528604 -59744047 + ORR1B1 LTR MaLR 1 352 -42 2 856 1044 96 0 0 chr17 35528604 35528740 -59743911 + B1_Mus1 SINE Alu 2 137 -11 3 856 1868 144 80 130 chr17 35528740 35528779 -59743872 + ORR1B1 LTR MaLR 353 353 -41 2 856 1133 48 13 27 chr17 35528779 35528928 -59743723 - B1_Mus2 SINE Alu 0 147 1 3 856 1204 81 17 23 chr17 35528938 35528963 -59743688 - B2_Mm2 SINE B2 -19 176 149 3 856 365 81 0 16 chr17 35528963 35529026 -59743625 + (TATG)n Simple_repeat Simple_repeat 3 64 0 3 856 1204 81 17 23 chr17 35529026 35529177 -59743474 - B2_Mm2 SINE B2 -47 148 1 3 856 1868 144 80 130 chr17 35529177 35529220 -59743431 + ORR1B1 LTR MaLR 353 394 0 3 856 458 225 33 75 chr17 35529220 35529310 -59743341 + PB1D9 SINE Alu 35 120 0 2 856 269 347 118 44 chr17 35529706 35530099 -59742552 + Tigger7 DNA MER2_type 2207 2482 -9 3 856 1077 97 0 0 chr17 35530182 35530327 -59742324 + B1_Mm SINE Alu 3 147 0 3 856 279 0 0 0 chr17 35530344 35530375 -59742276 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 856 773 77 0 93 chr17 35532717 35532846 -59739805 - B1_Mus1 SINE Alu -30 118 2 3 856 248 356 50 0 chr17 35533417 35533518 -59739133 + MLT2F LTR ERVL 276 381 -282 3 856 297 0 0 0 chr17 35533585 35533618 -59739033 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 4 856 1316 90 6 17 chr17 35533785 35533965 -59738686 - B2_Mm1t SINE B2 -14 179 2 4 856 3439 163 19 126 chr17 35536012 35536062 -59736589 - RMER19B LTR ERVK 0 902 865 4 856 207 0 0 0 chr17 35536062 35536085 -59736566 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 856 1132 72 0 0 chr17 35536085 35536224 -59736427 - B1_Mus1 SINE Alu -9 139 1 4 856 3439 166 20 124 chr17 35536224 35536966 -59735685 - RMER19B LTR ERVK -38 864 209 4 856 2575 200 174 11 chr17 35536971 35537613 -59735038 - RMER19B LTR ERVK -11 891 145 4 856 1061 120 52 42 chr17 35538708 35538899 -59733752 + B2_Mm2 SINE B2 2 194 -1 4 856 249 225 41 24 chr17 35539065 35539188 -59733463 + (TTATA)n Simple_repeat Simple_repeat 5 129 0 4 856 456 19 0 0 chr17 35539202 35539255 -59733396 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 856 371 219 10 0 chr17 35539632 35539728 -59732923 + CT-rich Low_complexity Low_complexity 2 98 0 4 856 690 100 0 0 chr17 35540006 35540106 -59732545 + (GGAA)n Simple_repeat Simple_repeat 3 102 0 5 856 189 0 0 0 chr17 35542006 35542027 -59730624 + (CAGAG)n Simple_repeat Simple_repeat 5 25 0 5 856 725 219 10 119 chr17 35542489 35542691 -59729960 - RMER19A LTR ERVK -557 180 1 5 856 9966 241 40 10 chr17 35542710 35544154 -59728497 - MurERV4-int LTR ERVK -2616 2644 1155 5 856 194 0 39 0 chr17 35544154 35544180 -59728471 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 5 856 9966 241 40 10 chr17 35544180 35545211 -59727440 - MurERV4-int LTR ERVK -4106 1154 96 5 856 1653 213 3 0 chr17 35545631 35545932 -59726719 + RodERV21-int LTR ERV1 1537 1838 -3153 5 856 2250 214 45 56 chr17 35545922 35546437 -59726214 + RodERV21-int LTR ERV1 2157 2665 -2326 5 856 1194 68 0 0 chr17 35546613 35546759 -59725892 + B1_Mm SINE Alu 2 147 0 5 856 1065 208 18 5 chr17 35548124 35548346 -59724305 + RodERV21-int LTR ERV1 3502 3726 -1265 5 856 676 231 132 5 chr17 35548346 35548550 -59724101 + RMER21A LTR ERV1 75 304 -643 5 856 10848 210 43 28 chr17 35548550 35550972 -59721679 - MERVL_2A-int LTR ERVL -436 5325 2867 5 856 498 119 35 35 chr17 35550960 35551047 -59721604 + MERVL_2A-int LTR ERVL 2442 2528 -3233 5 856 3586 181 28 8 chr17 35551043 35551711 -59720940 - MERVL_2A-int LTR ERVL -3342 2419 1738 5 856 264 289 0 46 chr17 35551744 35551758 -59720893 + RLTR25A LTR ERVK 510 587 -511 6 856 453 147 0 0 chr17 35551758 35551826 -59720825 + B1_Mus2 SINE Alu 46 113 -34 6 856 481 171 57 0 chr17 35551833 35551921 -59720730 - RMER4A LTR ERVK 0 466 374 6 856 1002 128 0 0 chr17 35551921 35552093 -59720558 + (GA)n Simple_repeat Simple_repeat 1 172 0 6 856 600 243 26 0 chr17 35552583 35552735 -59719916 + ORR1C1 LTR MaLR 25 180 -198 6 856 466 82 51 0 chr17 35552735 35552833 -59719818 + (TC)n Simple_repeat Simple_repeat 1 103 0 6 856 1086 182 9 5 chr17 35552833 35553043 -59719608 + ORR1C1 LTR MaLR 166 376 -2 6 856 2357 277 57 54 chr17 35553045 35553620 -59719031 + ORR1C1-int LTR MaLR 5 590 -780 6 856 1658 36 0 5 chr17 35553620 35553814 -59718837 + B2_Mm1t SINE B2 1 193 0 6 856 2357 277 57 54 chr17 35553814 35554077 -59718574 + ORR1C1-int LTR MaLR 591 846 -524 6 856 1590 169 19 69 chr17 35554082 35554444 -59718207 - MERVL_2A-int LTR ERVL -4513 1248 905 5 856 1219 251 105 29 chr17 35554467 35554944 -59717707 + MYSERV-int LTR ERVK 4199 4711 -1839 6 856 951 266 34 8 chr17 35554970 35555205 -59717446 + MYSERV-int LTR ERVK 4862 5102 -1448 6 856 509 322 32 27 chr17 35555221 35555409 -59717242 + RMER4A LTR ERVK 252 440 -26 6 856 1532 181 56 3 chr17 35555428 35555813 -59716838 - RMER19A LTR ERVK 0 737 275 6 856 4597 91 37 39 chr17 35555875 35556611 -59716040 + RMER17A LTR ERVK 1 734 -17 7 856 636 278 47 18 chr17 35556757 35557035 -59715616 + RLTR15 LTR ERVK 42 327 -32 7 856 456 224 59 17 chr17 35557040 35557158 -59715493 - MT2B LTR ERVL -202 399 277 7 856 232 279 103 28 chr17 35557217 35557324 -59715327 - MT2B LTR ERVL -485 116 2 7 856 518 181 193 94 chr17 35558078 35558249 -59714402 - B3 SINE B2 -5 190 3 7 856 226 257 71 0 chr17 35558498 35558548 -59714103 + LTR16D2 LTR ERVL 354 408 -164 7 856 1161 218 151 9 chr17 35558548 35558872 -59713779 + ORR1D1 LTR MaLR 1 370 -4 7 856 226 257 71 0 chr17 35558872 35558891 -59713760 + LTR16D2 LTR ERVL 409 427 -145 7 856 210 138 0 0 chr17 35558876 35558905 -59713746 + PB1D9 SINE Alu 6 34 -86 7 856 1855 141 103 3 chr17 35558905 35559225 -59713426 + ORR1B1 LTR MaLR 1 352 -42 7 856 1086 88 0 0 chr17 35559225 35559361 -59713290 + B1_Mus1 SINE Alu 2 137 -11 7 856 1039 71 43 0 chr17 35559400 35559541 -59713110 - B1_Mus2 SINE Alu 0 147 1 7 856 327 25 0 0 chr17 35559576 35559616 -59713035 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 8 856 180 0 0 0 chr17 35559672 35559692 -59712959 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 8 856 279 188 76 30 chr17 35559717 35559739 -59712912 + ORR1B1 LTR MaLR 278 304 -42 8 856 1424 75 16 16 chr17 35559739 35559929 -59712722 - B2_Mm2 SINE B2 -5 190 1 8 856 290 116 0 0 chr17 35559929 35559972 -59712679 + ORR1B1 LTR MaLR 352 394 0 8 856 350 187 0 96 chr17 35559979 35560062 -59712589 + PB1D9 SINE Alu 46 120 0 7 856 278 356 102 79 chr17 35560460 35560853 -59711798 + MER44A DNA MER2_type 102 541 -9 8 856 1154 76 0 0 chr17 35560937 35561082 -59711569 + B1_Mm SINE Alu 3 147 0 8 856 243 0 0 0 chr17 35561099 35561126 -59711525 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 856 340 204 9 84 chr17 35563492 35563599 -59709052 - RLTR25B LTR ERVK -502 526 428 8 856 714 68 0 204 chr17 35563506 35563653 -59708998 - B1_Mus1 SINE Alu -30 118 2 8 856 251 366 50 0 chr17 35564224 35564325 -59708326 + MLT2F LTR ERVL 276 381 -282 8 856 225 0 0 0 chr17 35564392 35564417 -59708234 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 8 856 215 185 0 100 chr17 35564441 35564501 -59708150 - B2_Mm2 SINE B2 -94 101 48 9 856 1310 96 6 17 chr17 35564582 35564762 -59707889 - B2_Mm1t SINE B2 -14 179 2 9 856 3651 179 120 71 chr17 35566077 35566789 -59705862 + RMER19B LTR ERVK 1 760 -142 9 856 2048 93 28 22 chr17 35566789 35567109 -59705542 + RLTRETN_Mm LTR ERVK 1 322 0 9 856 3651 179 120 71 chr17 35567109 35567256 -59705395 + RMER19B LTR ERVK 761 902 0 9 856 2215 214 20 6 chr17 35567280 35567773 -59704878 + MYSERV-int LTR ERVK 5345 5844 -706 9 856 2104 102 8 110 chr17 35567773 35567828 -59704823 + ORR1A2 LTR MaLR 1 56 -271 9 856 1195 74 0 0 chr17 35567828 35567976 -59704675 + B1_Mus1 SINE Alu 1 148 0 9 856 2104 102 8 110 chr17 35567976 35568284 -59704367 + ORR1A2 LTR MaLR 57 327 0 9 856 7230 160 220 16 chr17 35568290 35569908 -59702743 + ORR1A2-int LTR MaLR 16 1963 0 9 856 2461 84 19 3 chr17 35569908 35570230 -59702421 + ORR1A2 LTR MaLR 1 327 0 9 856 2528 187 47 45 chr17 35570231 35570854 -59701797 + MYSERV6-int LTR ERVK 8273 8896 -63 9 856 37 39 0 0 chr17 35570861 35570912 -59701739 + AT_rich Low_complexity Low_complexity 1 51 0 9 856 690 269 48 38 chr17 35571112 35571405 -59701246 + RLTR15 LTR ERVK 32 327 -32 9 856 417 198 88 26 chr17 35571410 35571524 -59701127 - MT2B LTR ERVL -202 399 279 1 856 301 184 112 50 chr17 35571596 35571676 -59700975 - MT2B LTR ERVL -418 115 31 1 856 577 216 141 31 chr17 35572478 35572669 -59699982 - B3 SINE B2 -2 214 3 1 856 1242 207 127 12 chr17 35572968 35573300 -59699351 + ORR1D1 LTR MaLR 1 370 -4 1 856 1913 132 103 3 chr17 35573333 35573653 -59698998 + ORR1B1 LTR MaLR 1 352 -42 1 856 1037 103 0 0 chr17 35573653 35573789 -59698862 + B1_Mus1 SINE Alu 2 137 -11 1 856 1102 69 13 27 chr17 35573838 35573987 -59698664 - B1_Mus2 SINE Alu 0 147 1 1 856 180 0 0 0 chr17 35574022 35574042 -59698609 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 1 856 253 188 76 30 chr17 35574067 35574089 -59698562 + ORR1B1 LTR MaLR 278 304 -42 1 856 1421 75 16 16 chr17 35574089 35574279 -59698372 - B2_Mm2 SINE B2 -5 190 1 1 856 278 116 0 0 chr17 35574279 35574322 -59698329 + ORR1B1 LTR MaLR 352 394 0 1 856 350 187 0 96 chr17 35574329 35574412 -59698239 + PB1D9 SINE Alu 46 120 0 1 856 278 356 102 79 chr17 35574806 35575199 -59697452 + Tigger7 DNA MER2_type 2207 2482 -9 1 856 1154 76 0 0 chr17 35575283 35575428 -59697223 + B1_Mm SINE Alu 3 147 0 1 856 243 0 0 0 chr17 35575444 35575471 -59697180 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 856 609 42 0 5 chr17 35577819 35577904 -59694747 - B1_Mus2 SINE Alu -25 122 42 1 856 325 211 52 82 chr17 35577904 35577948 -59694703 - RLTR25B LTR ERVK -502 521 397 1 856 267 91 68 68 chr17 35577998 35578057 -59694594 - B1_Mur4 SINE Alu -90 60 2 1 856 267 356 50 0 chr17 35578627 35578728 -59693923 + MLT2F LTR ERVL 276 381 -282 1 856 225 0 0 0 chr17 35578795 35578820 -59693831 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1 856 215 185 0 100 chr17 35578844 35578904 -59693747 - B2_Mm2 SINE B2 -94 101 48 1 856 1310 96 6 17 chr17 35578985 35579165 -59693486 - B2_Mm1t SINE B2 -14 179 2 1 856 22 0 0 0 chr17 35580673 35580695 -59691956 + AT_rich Low_complexity Low_complexity 1 22 0 1 856 3385 166 16 137 chr17 35581210 35581272 -59691379 - RMER19B LTR ERVK 0 902 865 1 856 1175 68 7 0 chr17 35581272 35581418 -59691233 - B1_Mus1 SINE Alu -1 147 1 1 856 3385 169 17 134 chr17 35581418 35582161 -59690490 - RMER19B LTR ERVK -38 864 208 1 856 2635 197 174 11 chr17 35582166 35582808 -59689843 - RMER19B LTR ERVK -11 891 145 1 856 1067 120 52 42 chr17 35583903 35584094 -59688557 + B2_Mm2 SINE B2 2 194 -1 1 856 249 225 41 24 chr17 35584260 35584383 -59688268 + (TTATA)n Simple_repeat Simple_repeat 5 129 0 1 856 438 20 0 0 chr17 35584397 35584448 -59688203 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 856 371 219 10 0 chr17 35584825 35584921 -59687730 + CT-rich Low_complexity Low_complexity 2 98 0 1 856 771 92 0 0 chr17 35585197 35585306 -59687345 + (GAAA)n Simple_repeat Simple_repeat 1 109 0 1 856 189 0 0 0 chr17 35587206 35587227 -59685424 + (CAGAG)n Simple_repeat Simple_repeat 5 25 0 1 856 730 219 10 119 chr17 35587689 35587891 -59684760 - RMER19A LTR ERVK -557 180 1 1 856 9335 241 40 10 chr17 35587910 35589354 -59683297 - MurERV4-int LTR ERVK -2616 2644 1155 1 856 194 0 39 0 chr17 35589354 35589380 -59683271 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1 856 9335 241 40 10 chr17 35589380 35590411 -59682240 - MurERV4-int LTR ERVK -4106 1154 96 1 856 1562 213 3 0 chr17 35590831 35591132 -59681519 + RodERV21-int LTR ERV1 1537 1838 -3153 1 856 2070 220 43 54 chr17 35591122 35591637 -59681014 + RodERV21-int LTR ERV1 2157 2665 -2326 1 856 1208 68 0 0 chr17 35591813 35591959 -59680692 + B1_Mm SINE Alu 2 147 0 1 856 996 208 18 5 chr17 35593324 35593546 -59679105 + RodERV21-int LTR ERV1 3502 3726 -1265 1 856 691 231 132 5 chr17 35593546 35593750 -59678901 + RMER21A LTR ERV1 75 304 -643 1 856 10164 211 43 28 chr17 35593750 35596172 -59676479 - MERVL_2A-int LTR ERVL -436 5325 2867 1 856 465 119 35 35 chr17 35596160 35596247 -59676404 + MERVL_2A-int LTR ERVL 2442 2528 -3233 1 856 3377 181 28 8 chr17 35596243 35596911 -59675740 - MERVL_2A-int LTR ERVL -3342 2419 1738 1 856 269 289 0 46 chr17 35596944 35596958 -59675693 + RLTR25A LTR ERVK 510 587 -511 1 856 456 147 0 0 chr17 35596958 35597026 -59675625 + B1_Mus2 SINE Alu 46 113 -34 1 856 477 171 57 0 chr17 35597033 35597121 -59675530 - RMER4A LTR ERVK 0 466 374 1 856 1020 126 0 0 chr17 35597121 35597295 -59675356 + (GA)n Simple_repeat Simple_repeat 1 174 0 1 856 607 243 26 0 chr17 35597785 35597937 -59674714 + ORR1C1 LTR MaLR 25 180 -198 1 856 502 78 49 0 chr17 35597937 35598039 -59674612 + (TC)n Simple_repeat Simple_repeat 1 107 0 1 856 1092 182 9 5 chr17 35598039 35598249 -59674402 + ORR1C1 LTR MaLR 166 376 -2 1 856 2375 277 57 54 chr17 35598251 35598826 -59673825 + ORR1C1-int LTR MaLR 5 590 -780 1 856 1660 36 0 5 chr17 35598826 35599020 -59673631 + B2_Mm1t SINE B2 1 193 0 1 856 2375 277 57 54 chr17 35599020 35599283 -59673368 + ORR1C1-int LTR MaLR 591 846 -524 1 856 1486 169 19 69 chr17 35599288 35599650 -59673001 - MERVL_2A-int LTR ERVL -4513 1248 905 1 856 1123 257 105 29 chr17 35599673 35600150 -59672501 + MYSERV-int LTR ERVK 4199 4711 -1839 1 856 866 271 38 8 chr17 35600176 35600414 -59672237 + MYSERV-int LTR ERVK 4862 5106 -1444 1 856 487 333 29 23 chr17 35600429 35600601 -59672050 + RMER4A LTR ERVK 253 425 -41 1 856 1603 177 56 3 chr17 35600620 35601005 -59671646 - RMER19A LTR ERVK 0 737 275 1 856 4871 84 28 70 chr17 35601065 35601849 -59670802 + RMER17A LTR ERVK 1 751 0 1 856 604 293 54 46 chr17 35601930 35602251 -59670400 + RLTR15 LTR ERVK 42 338 -21 1 856 450 211 60 26 chr17 35602242 35602359 -59670292 - MT2B LTR ERVL -202 399 279 1 856 263 230 165 29 chr17 35602428 35602531 -59670120 - MT2B LTR ERVL -415 118 2 1 856 527 182 194 94 chr17 35603290 35603460 -59669191 - B3 SINE B2 -6 189 3 1 856 1270 210 127 9 chr17 35603759 35604090 -59668561 + ORR1D1 LTR MaLR 1 370 -4 1 856 210 138 0 0 chr17 35604094 35604123 -59668528 + PB1D9 SINE Alu 6 34 -86 1 856 1908 134 100 3 chr17 35604123 35604444 -59668207 + ORR1B1 LTR MaLR 1 352 -42 1 856 1139 75 0 39 chr17 35604444 35604597 -59668054 + B1_Mus1 SINE Alu 2 148 0 1 856 1111 75 7 27 chr17 35604648 35604798 -59667853 - B1_Mus2 SINE Alu 0 147 1 1 856 1278 108 32 5 chr17 35604822 35605009 -59667642 - B2_Mm2 SINE B2 -3 192 1 1 856 290 116 0 0 chr17 35605009 35605052 -59667599 + ORR1B1 LTR MaLR 352 394 0 1 856 1249 48 0 0 chr17 35605062 35605209 -59667442 + B1_Mus1 SINE Alu 2 148 0 1 856 314 114 60 157 chr17 35605239 35605322 -59667329 + PB1D9 SINE Alu 46 120 0 1 856 952 24 129 8 chr17 35605653 35605777 -59666874 - B1_Mus1 SINE Alu -9 139 1 1 856 294 323 100 95 chr17 35605819 35606281 -59666370 + MER44B DNA MER2_type 79 542 -8 1 856 789 62 35 17 chr17 35608746 35608861 -59663790 - B1_Mus1 SINE Alu -30 118 2 1 856 287 342 50 17 chr17 35609413 35609532 -59663119 + MLT2F LTR ERVL 259 381 -282 1 856 285 75 0 0 chr17 35609593 35609633 -59663018 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 1 856 292 145 0 98 chr17 35609658 35609719 -59662932 - B2_Mm2 SINE B2 -94 101 47 1 856 1195 119 11 6 chr17 35609804 35609981 -59662670 - B2_Mm1t SINE B2 -14 179 2 1 856 279 0 0 0 chr17 35611525 35611556 -59661095 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 856 670 238 111 5 chr17 35612262 35612452 -59660199 + B3 SINE B2 1 210 -6 1 856 1093 82 0 0 chr17 35612705 35612852 -59659799 + B1_Mus1 SINE Alu 1 147 -1 1 856 189 0 0 0 chr17 35612852 35612873 -59659778 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 1 856 1159 55 0 0 chr17 35613033 35613178 -59659473 + B1_Mus2 SINE Alu 2 146 -1 1 856 255 61 0 0 chr17 35613180 35613213 -59659438 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 856 281 234 98 119 chr17 35613396 35613590 -59659061 + RMER15 LTR ERVL 338 527 -48 1 856 588 164 19 0 chr17 35613849 35613953 -59658698 - B1_Mus2 SINE Alu 0 147 42 1 856 279 0 0 0 chr17 35614056 35614087 -59658564 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 856 1411 48 0 92 chr17 35614140 35614369 -59658282 - L1Md_F3 LINE L1 0 6584 6377 1 856 1530 212 11 50 chr17 35614369 35614735 -59657916 - RMER19C LTR ERVK -10 727 257 1 856 1171 55 0 0 chr17 35614735 35614881 -59657770 + B1_Mus1 SINE Alu 1 146 -2 1 856 514 344 62 70 chr17 35614881 35615145 -59657506 - RMER19C LTR ERVK -338 399 107 1 856 3013 91 166 14 chr17 35615153 35615708 -59656943 + RLTR6_Mm LTR ERV1 1 639 -15 1 856 11754 25 3 36 chr17 35615708 35617205 -59655446 + MMVL30-int LTR ERV1 21 1468 -2230 1 856 8226 84 40 34 chr17 35617280 35619572 -59653079 + MMVL30-int LTR ERV1 960 3698 0 1 856 2844 95 172 15 chr17 35619572 35620107 -59652544 + RLTR6_Mm LTR ERV1 1 619 -35 1 856 270 98 0 0 chr17 35620107 35620148 -59652503 - RMER19C LTR ERVK -570 41 1 1 856 590 175 0 0 chr17 35620148 35620251 -59652400 + B1_Mur4 SINE Alu 48 150 0 1 856 741 67 0 9 chr17 35620286 35620391 -59652260 + B1_Mm SINE Alu 1 104 -43 1 856 270 241 62 0 chr17 35620398 35620512 -59652139 + L1M2 LINE L1 5235 5360 -940 1 856 558 204 0 44 chr17 35620518 35620631 -59652020 + B1_Mur2 SINE Alu 35 142 -7 1 856 1116 58 0 0 chr17 35620641 35620779 -59651872 + B1_Mus1 SINE Alu 2 139 -9 1 856 243 0 0 0 chr17 35620779 35620806 -59651845 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 856 354 278 118 8 chr17 35620842 35620969 -59651682 + Lx8 LINE L1 6268 6408 -1065 1 856 488 183 263 34 chr17 35621311 35621486 -59651165 - B3 SINE B2 0 216 2 1 856 337 315 94 0 chr17 35621515 35621642 -59651009 - B1F SINE Alu -9 140 2 1 856 1086 106 84 0 chr17 35621751 35621930 -59650721 - B2_Mm2 SINE B2 -1 194 1 1 856 1043 69 7 20 chr17 35621943 35621956 -59650695 - B1_Mus1 SINE Alu 0 148 138 1 856 256 24 0 47 chr17 35621956 35621999 -59650652 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1 856 1043 69 7 20 chr17 35621999 35622133 -59650518 - B1_Mus1 SINE Alu -11 137 3 1 856 477 0 0 0 chr17 35622463 35622516 -59650135 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 856 360 0 0 0 chr17 35622516 35622555 -59650096 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 856 275 315 64 9 chr17 35622594 35622703 -59649948 - PB1D10 SINE Alu -2 115 1 1 856 306 73 0 0 chr17 35623086 35623127 -59649524 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 1 856 264 154 0 0 chr17 35623285 35623337 -59649314 + CT-rich Low_complexity Low_complexity 1 52 0 1 856 1447 11 67 0 chr17 35623431 35623611 -59649040 + B2_Mm1t SINE B2 2 193 0 1 856 180 0 0 0 chr17 35623659 35623679 -59648972 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1 856 352 250 93 0 chr17 35624044 35624152 -59648499 + L1MEg LINE L1 1822 1939 -4145 1 856 795 82 0 54 chr17 35624329 35624458 -59648193 - B1_Mus1 SINE Alu 0 148 27 2 856 288 161 111 121 chr17 35624371 35624470 -59648181 - MT2B LTR ERVL -337 264 167 2 856 1482 48 0 0 chr17 35624501 35624687 -59647964 - B2_Mm1t SINE B2 -7 186 1 2 856 207 0 0 0 chr17 35624773 35624796 -59647855 + (A)n Simple_repeat Simple_repeat 1 23 0 2 856 546 219 23 30 chr17 35625000 35625132 -59647519 + B3A SINE B2 5 135 -63 2 856 488 66 0 26 chr17 35625156 35625234 -59647417 + (CATA)n Simple_repeat Simple_repeat 2 77 0 2 856 970 54 0 0 chr17 35625597 35625727 -59646924 - B1_Mus2 SINE Alu -12 135 6 2 856 469 283 47 29 chr17 35625619 35625790 -59646861 - B4 SINE B4 -88 204 31 2 856 253 275 83 98 chr17 35625897 35626030 -59646621 - MTE2b LTR MaLR -193 186 56 2 856 350 190 0 48 chr17 35626029 35626112 -59646539 - MTE2b LTR MaLR -281 98 20 2 856 771 92 0 0 chr17 35626112 35626221 -59646430 + (TTTC)n Simple_repeat Simple_repeat 2 110 0 2 856 1068 64 28 0 chr17 35626221 35626362 -59646289 - B1_Mus2 SINE Alu -2 145 1 2 856 1247 84 10 50 chr17 35626376 35626576 -59646075 - B2_Mm1t SINE B2 0 193 2 2 856 360 280 0 45 chr17 35626585 35626697 -59645954 - B1_Mur2 SINE Alu -40 109 3 2 856 1431 68 16 0 chr17 35626888 35627080 -59645571 + B2_Mm2 SINE B2 1 195 0 2 856 333 300 27 9 chr17 35627690 35627801 -59644850 - PB1D10 SINE Alu -1 116 4 2 856 322 358 72 38 chr17 35628234 35628302 -59644349 - L1MEg LINE L1 -2753 3390 3321 2 856 737 180 36 7 chr17 35628302 35628442 -59644209 + B1_Mur4 SINE Alu 1 144 -6 2 856 357 336 24 19 chr17 35628442 35628578 -59644073 - L1MEg LINE L1 -4160 2082 1964 2 856 1008 103 7 0 chr17 35628578 35628724 -59643927 - B1_Mus1 SINE Alu 0 148 2 2 856 322 358 72 38 chr17 35628724 35628753 -59643898 - L1MEg LINE L1 -2969 3174 3149 2 856 624 231 191 12 chr17 35628794 35628956 -59643695 - B3 SINE B2 -25 191 1 2 856 977 74 82 0 chr17 35629166 35629301 -59643350 + B1_Mm SINE Alu 2 147 0 2 856 491 0 17 0 chr17 35629307 35629366 -59643285 + (GAAA)n Simple_repeat Simple_repeat 2 61 0 2 856 1177 79 90 0 chr17 35629718 35629735 -59642916 - B2_Mm1a SINE B2 0 193 177 2 856 180 0 0 0 chr17 35629735 35629755 -59642896 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 2 856 1177 79 90 0 chr17 35629755 35629914 -59642737 - B2_Mm1a SINE B2 -17 176 2 2 856 228 312 47 0 chr17 35629935 35629999 -59642652 - B1_Mus2 SINE Alu -80 67 1 2 856 1201 78 60 32 chr17 35630090 35630275 -59642376 - B2_Mm2 SINE B2 -4 191 2 2 856 564 207 0 47 chr17 35630281 35630319 -59642332 - B1F2 SINE Alu -2 147 114 2 856 185 0 40 0 chr17 35630319 35630344 -59642307 + (TATAG)n Simple_repeat Simple_repeat 5 30 0 2 856 564 207 0 47 chr17 35630344 35630432 -59642219 - B1F2 SINE Alu -36 113 27 2 856 645 235 59 0 chr17 35630448 35630584 -59642067 - B1_Mur4 SINE Alu -6 144 1 2 856 712 171 186 6 chr17 35630600 35630777 -59641874 - B3 SINE B2 -7 209 1 2 856 1114 62 7 0 chr17 35630799 35630944 -59641707 + B1_Mus1 SINE Alu 3 148 0 2 856 309 238 13 20 chr17 35631117 35631267 -59641384 + ORR1B1-int LTR MaLR 606 754 -755 2 856 1018 65 0 0 chr17 35631169 35631307 -59641344 + B1_Mus2 SINE Alu 10 147 0 2 856 268 179 18 0 chr17 35631320 35631376 -59641275 + Lx9 LINE L1 6566 6622 -1022 2 856 1486 176 114 3 chr17 35631387 35631711 -59640940 + Lx9 LINE L1 6683 7042 -602 2 856 436 259 60 103 chr17 35631711 35631762 -59640889 + B4 SINE B4 47 96 -196 2 856 1179 109 10 10 chr17 35631762 35631956 -59640695 + B2_Mm2 SINE B2 2 195 0 2 856 436 259 60 103 chr17 35631956 35632089 -59640562 + B4 SINE B4 97 223 -69 2 856 226 145 32 113 chr17 35632105 35632167 -59640484 + Lx9 LINE L1 6566 6622 -1022 2 856 237 33 0 0 chr17 35632226 35632256 -59640395 + (G)n Simple_repeat Simple_repeat 1 30 0 2 856 1878 185 110 72 chr17 35632257 35632786 -59639865 + Lx9 LINE L1 7090 7638 -6 2 856 1494 62 0 0 chr17 35633227 35633419 -59639232 - B2_Mm1t SINE B2 -1 192 1 2 856 1415 40 75 10 chr17 35633420 35633621 -59639030 - MTB LTR MaLR -5 395 182 2 856 1080 132 0 0 chr17 35633611 35633778 -59638873 - B2_Mm2 SINE B2 -28 167 1 2 856 1574 25 0 0 chr17 35633778 35633974 -59638677 - MTB LTR MaLR -204 196 1 2 856 675 270 0 22 chr17 35634116 35634294 -59638357 - B3A SINE B2 0 198 25 2 856 570 51 0 0 chr17 35634304 35634383 -59638268 + B1_Mus2 SINE Alu 2 80 -67 2 856 952 33 0 0 chr17 35634404 35634526 -59638125 - B1_Mus1 SINE Alu 0 148 27 2 856 1555 52 0 0 chr17 35634530 35634723 -59637928 - B2_Mm1t SINE B2 0 193 1 2 856 477 0 0 0 chr17 35634883 35634936 -59637715 + (TGG)n Simple_repeat Simple_repeat 3 55 0 2 856 1021 95 0 0 chr17 35635263 35635400 -59637251 + B1_Mus1 SINE Alu 2 138 -10 2 856 303 52 34 17 chr17 35635400 35635459 -59637192 + (CAAA)n Simple_repeat Simple_repeat 2 61 0 2 856 185 0 0 39 chr17 35635461 35635487 -59637164 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 2 856 1058 76 7 0 chr17 35635554 35635699 -59636952 + B1_Mus2 SINE Alu 2 147 0 2 856 234 0 0 0 chr17 35635699 35635725 -59636926 + (A)n Simple_repeat Simple_repeat 1 26 0 2 856 23 23 0 44 chr17 35636376 35636395 -59636256 + AT_rich Low_complexity Low_complexity 1 19 0 2 856 685 231 21 0 chr17 35636395 35636538 -59636113 - B1_Mus2 SINE Alu -1 146 1 2 856 23 23 0 44 chr17 35636538 35636563 -59636088 + AT_rich Low_complexity Low_complexity 1 24 0 2 856 293 189 9 32 chr17 35636715 35636814 -59635837 + B1_Mm SINE Alu 28 121 -29 2 856 1076 79 0 0 chr17 35637079 35637219 -59635432 - B1_Mus2 SINE Alu -6 141 2 2 856 966 137 63 0 chr17 35637226 35637288 -59635363 - B2_Mm2 SINE B2 -8 187 122 2 856 522 0 0 0 chr17 35637288 35637346 -59635305 + (GA)n Simple_repeat Simple_repeat 1 58 0 2 856 966 137 63 0 chr17 35637346 35637458 -59635193 - B2_Mm2 SINE B2 -74 121 3 2 856 243 278 80 44 chr17 35637486 35637599 -59635052 - PB1D10 SINE Alu 0 117 1 2 856 429 20 0 0 chr17 35637985 35638035 -59634616 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 856 1014 91 0 0 chr17 35638147 35638290 -59634361 + B1_Mus1 SINE Alu 6 148 0 2 856 458 213 21 0 chr17 35638598 35638692 -59633959 + ID_B1 SINE B4 128 223 -1 2 856 1034 83 0 7 chr17 35638697 35638843 -59633808 + B1_Mus1 SINE Alu 4 148 0 2 856 250 202 35 81 chr17 35639577 35639663 -59632988 - B1F SINE Alu -1 148 67 2 856 354 261 31 52 chr17 35639746 35639843 -59632808 - B3A SINE B2 -103 95 1 2 856 309 96 206 0 chr17 35640130 35640203 -59632448 - B2_Mm1t SINE B2 0 193 106 2 856 1028 89 0 20 chr17 35640203 35640352 -59632299 - B1_Mus2 SINE Alu 0 147 2 2 856 747 206 7 0 chr17 35640371 35640507 -59632144 + B1_Mur4 SINE Alu 5 141 -9 2 856 273 313 0 0 chr17 35641407 35641474 -59631177 + PB1D7 SINE Alu 42 108 -12 2 856 24 0 0 0 chr17 35644908 35644932 -59627719 + AT_rich Low_complexity Low_complexity 1 24 0 2 856 195 42 0 0 chr17 35645316 35645340 -59627311 + (TTTC)n Simple_repeat Simple_repeat 2 25 0 2 856 858 107 7 14 chr17 35645342 35645484 -59627167 - B2_Mm2 SINE B2 -22 173 33 2 856 1581 30 0 0 chr17 35645495 35645693 -59626958 - MT2_Mm LTR ERVL 0 493 296 2 856 203 208 19 19 chr17 35647123 35647177 -59625474 + C-rich Low_complexity Low_complexity 6 59 0 2 856 1362 29 40 6 chr17 35648039 35648212 -59624439 - B2_Mm2 SINE B2 -15 180 2 2 856 362 198 75 47 chr17 35648224 35648330 -59624321 - PB1D9 SINE Alu 0 120 12 2 856 247 271 10 59 chr17 35648248 35648350 -59624301 - ID_B1 SINE B4 -52 172 76 2 856 487 261 65 7 chr17 35648403 35648542 -59624109 - B3 SINE B2 -43 173 27 2 856 644 179 56 28 chr17 35648545 35648689 -59623962 - B1_Mus1 SINE Alu 0 148 1 2 856 180 0 0 0 chr17 35648714 35648734 -59623917 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2 856 1054 75 0 26 chr17 35648739 35648890 -59623761 - B1_Mm SINE Alu 0 147 1 2 856 1385 73 21 0 chr17 35648923 35649114 -59623537 + B2_Mm2 SINE B2 1 195 0 2 856 1156 54 90 0 chr17 35649146 35649312 -59623339 - B2_Mm2 SINE B2 -14 181 1 2 856 379 310 35 0 chr17 35649445 35649561 -59623090 - RSINE1 SINE B4 -35 130 11 2 856 489 110 0 0 chr17 35650214 35650287 -59622364 + (CA)n Simple_repeat Simple_repeat 1 73 0 2 856 635 223 37 31 chr17 35650307 35650469 -59622182 - B2_Mm2 SINE B2 -22 173 11 2 856 292 254 0 0 chr17 35650867 35650926 -59621725 + B1F SINE Alu 85 143 -6 2 856 573 277 36 36 chr17 35650922 35651087 -59621564 + B3 SINE B2 27 191 -25 2 857 244 248 45 17 chr17 35652190 35652277 -59620374 - PB1D10 SINE Alu -8 112 25 2 857 22 35 0 0 chr17 35653825 35653854 -59618797 + GC_rich Low_complexity Low_complexity 1 29 0 2 857 221 159 0 0 chr17 35655906 35655950 -59616701 + T-rich Low_complexity Low_complexity 1 44 0 2 857 1110 76 0 0 chr17 35655951 35656095 -59616556 - B1_Mus2 SINE Alu -1 146 3 2 857 1148 105 39 6 chr17 35656128 35656310 -59616341 - B2_Mm2 SINE B2 -7 188 1 2 857 694 169 2 31 chr17 35656363 35656508 -59616143 + B1_Mus2 SINE Alu 5 145 -2 2 857 746 242 16 11 chr17 35656516 35656704 -59615947 - B3A SINE B2 -9 189 1 2 857 744 114 0 22 chr17 35657169 35657303 -59615348 + (TCC)n Simple_repeat Simple_repeat 3 133 0 2 857 332 228 89 0 chr17 35657366 35657445 -59615206 + ID_B1 SINE B4 135 220 -4 2 857 224 140 68 23 chr17 35657406 35657450 -59615201 + PB1D7 SINE Alu 75 120 0 2 857 1115 69 112 0 chr17 35658868 35659028 -59613623 + B2_Mm2 SINE B2 4 181 -14 2 857 1203 41 0 0 chr17 35659035 35659181 -59613470 - B1_Mus2 SINE Alu 0 147 2 2 857 25 31 0 0 chr17 35659181 35659213 -59613438 + AT_rich Low_complexity Low_complexity 1 32 0 3 857 228 222 15 45 chr17 35659243 35659309 -59613342 + ID4_ SINE ID 5 68 -15 3 857 304 200 0 0 chr17 35659364 35659419 -59613232 - B1_Mus2 SINE Alu -92 55 1 3 857 408 262 0 0 chr17 35659858 35659942 -59612709 - PB1D7 SINE Alu -10 110 27 3 857 1201 202 150 70 chr17 35659940 35660313 -59612338 - MTD LTR MaLR -15 404 2 3 857 225 83 0 0 chr17 35660480 35660516 -59612135 + (TTAA)n Simple_repeat Simple_repeat 3 38 0 3 857 816 61 9 0 chr17 35660516 35660631 -59612020 - B1_Mus1 SINE Alu -1 147 32 3 857 939 83 0 8 chr17 35660625 35660753 -59611898 + B1_Mus2 SINE Alu 10 137 -10 3 857 180 0 0 0 chr17 35660753 35660773 -59611878 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 857 263 105 0 0 chr17 35660776 35660814 -59611837 - B1_Mus2 SINE Alu -109 38 1 3 857 461 280 50 62 chr17 35660814 35660993 -59611658 - B4 SINE B4 -80 212 36 3 857 274 242 242 0 chr17 35661200 35661328 -59611323 - B3 SINE B2 -6 210 52 3 857 189 232 396 7 chr17 35662465 35662604 -59610047 - L2a LINE L2 -93 3333 3141 3 857 460 222 95 0 chr17 35662709 35662835 -59609816 - B1_Mus2 SINE Alu -9 138 1 3 857 797 146 33 53 chr17 35662873 35663025 -59609626 + B1_Mur2 SINE Alu 1 149 0 3 857 849 202 117 0 chr17 35663035 35663223 -59609428 - B3 SINE B2 -5 211 2 3 857 185 94 31 0 chr17 35663890 35663922 -59608729 + (TTCC)n Simple_repeat Simple_repeat 3 35 0 3 857 353 231 0 0 chr17 35663979 35664059 -59608592 + ID4 SINE ID 12 91 -61 3 857 246 32 0 0 chr17 35666177 35666208 -59606443 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 857 1054 55 7 7 chr17 35666208 35666343 -59606308 - B1_Mus2 SINE Alu -10 137 2 3 857 343 264 75 0 chr17 35666760 35666866 -59605785 + PB1D10 SINE Alu 1 114 -3 3 857 476 167 113 38 chr17 35668161 35668267 -59604384 - B1_Mur2 SINE Alu 0 149 36 3 857 558 238 13 83 chr17 35668306 35668422 -59604229 - B1_Mus1 SINE Alu -1 147 40 3 857 840 123 0 0 chr17 35668422 35668568 -59604083 + (CA)n Simple_repeat Simple_repeat 2 147 0 3 857 558 238 13 83 chr17 35668568 35668607 -59604044 - B1_Mus1 SINE Alu -109 39 3 3 857 662 284 30 0 chr17 35668882 35669051 -59603600 + B3 SINE B2 2 175 -41 3 857 258 105 0 0 chr17 35669051 35669089 -59603562 + (T)n Simple_repeat Simple_repeat 1 38 0 3 857 469 45 15 0 chr17 35669092 35669159 -59603492 - B1_Mus2 SINE Alu 0 147 80 3 857 216 0 0 0 chr17 35669410 35669434 -59603217 + (TGG)n Simple_repeat Simple_repeat 1 24 0 3 857 827 138 27 20 chr17 35671867 35672015 -59600636 - B1_Mur4 SINE Alu -1 149 1 3 857 693 214 27 7 chr17 35672163 35672178 -59600473 - B1_Mur3 SINE Alu 0 149 135 3 857 378 0 0 0 chr17 35672178 35672220 -59600431 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 857 693 214 27 7 chr17 35672220 35672350 -59600301 - B1_Mur3 SINE Alu -15 134 1 3 857 1227 81 11 6 chr17 35672396 35672570 -59600081 + B2_Mm2 SINE B2 2 176 -19 3 857 1106 61 7 0 chr17 35672682 35672829 -59599822 - B1_Mus1 SINE Alu 0 148 1 3 857 505 277 7 34 chr17 35672846 35672992 -59599659 + ID_B1 SINE B4 82 223 -1 3 857 617 221 80 51 chr17 35673123 35673299 -59599352 + B2_Mm2 SINE B2 1 181 -14 3 857 216 135 0 0 chr17 35673299 35673336 -59599315 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 857 1979 210 192 11 chr17 35673439 35673742 -59598909 + Lx6 LINE L1 6829 7176 -284 3 857 1321 63 20 35 chr17 35673742 35673939 -59598712 - B2_Mm2 SINE B2 0 195 2 3 857 1979 210 192 11 chr17 35673939 35674164 -59598487 + Lx6 LINE L1 7177 7453 -7 3 857 1352 64 37 16 chr17 35674164 35674355 -59598296 + B2_Mm2 SINE B2 1 195 0 3 857 975 209 19 5 chr17 35674484 35674691 -59597960 + B3 SINE B2 2 211 -5 3 857 1074 82 0 20 chr17 35674760 35674910 -59597741 - B1_Mus2 SINE Alu 0 147 1 3 857 914 64 32 13 chr17 35674911 35675069 -59597582 + (TTTC)n Simple_repeat Simple_repeat 3 163 0 3 857 2171 142 72 5 chr17 35675123 35675511 -59597140 + MTC LTR MaLR 1 414 -7 3 857 223 171 0 0 chr17 35675517 35675552 -59597099 - PB1D7 SINE Alu -65 55 21 3 857 481 209 28 37 chr17 35675736 35675845 -59596806 + PB1D10 SINE Alu 5 112 -5 3 857 399 202 0 0 chr17 35675859 35675963 -59596688 + GA-rich Low_complexity Low_complexity 2 105 0 3 857 1092 81 0 7 chr17 35675965 35676114 -59596537 + B1_Mus1 SINE Alu 1 148 0 3 857 258 95 0 0 chr17 35676114 35676156 -59596495 + (TAAA)n Simple_repeat Simple_repeat 4 45 0 3 857 552 265 19 25 chr17 35676218 35676358 -59596293 + MTD LTR MaLR 71 209 -210 3 857 849 123 0 14 chr17 35676358 35676498 -59596153 + B1_Mus1 SINE Alu 1 138 -10 3 857 552 265 19 25 chr17 35676498 35676516 -59596135 + MTD LTR MaLR 210 228 -191 3 857 1084 43 21 0 chr17 35677079 35677220 -59595431 - B1_Mm SINE Alu -3 144 1 3 857 200 224 0 17 chr17 35677285 35677344 -59595307 + (TATG)n Simple_repeat Simple_repeat 2 59 0 3 857 494 261 67 34 chr17 35677346 35677817 -59594834 + RMER17C LTR ERVK 3 378 -32 3 857 620 225 92 24 chr17 35677812 35677976 -59594675 - B3 SINE B2 -41 175 1 3 857 369 0 0 0 chr17 35678197 35678238 -59594413 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 3 857 1058 84 7 0 chr17 35678238 35678381 -59594270 - B1_Mus1 SINE Alu -2 146 3 3 857 649 194 16 24 chr17 35678383 35678510 -59594141 - B1_Mur3 SINE Alu -1 148 23 3 857 240 81 27 0 chr17 35678754 35678791 -59593860 - ID_B1 SINE B4 -13 211 174 3 857 219 33 0 0 chr17 35678765 35678795 -59593856 - PB1 SINE Alu -27 100 71 3 857 195 42 0 0 chr17 35678796 35678820 -59593831 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 3 857 210 37 0 0 chr17 35678840 35678867 -59593784 + (T)n Simple_repeat Simple_repeat 1 27 0 3 857 1146 41 14 7 chr17 35678867 35679013 -59593638 - B1_Mm SINE Alu 0 147 1 3 857 1596 31 0 0 chr17 35679020 35679211 -59593440 - B2_Mm1a SINE B2 -1 192 2 3 857 1255 76 32 21 chr17 35679215 35679403 -59593248 - B2_Mm2 SINE B2 -5 190 1 3 857 1276 89 22 0 chr17 35679414 35679594 -59593057 - B2_Mm2 SINE B2 -10 185 2 3 857 252 299 37 9 chr17 35679934 35680042 -59592609 + PB1D10 SINE Alu 1 111 -6 3 857 275 284 25 92 chr17 35680682 35680802 -59591849 - L2c LINE L2 -16 3371 3260 3 857 567 229 119 26 chr17 35681023 35681216 -59591435 - ID_B1 SINE B4 -9 215 5 3 857 731 215 14 7 chr17 35681362 35681507 -59591144 - B1_Mur2 SINE Alu -1 148 3 3 857 330 244 33 11 chr17 35681519 35681610 -59591041 - PB1D7 SINE Alu -1 119 27 3 857 489 275 52 32 chr17 35681627 35681781 -59590870 - ID_B1 SINE B4 -1 223 67 3 857 350 342 165 35 chr17 35682031 35682261 -59590390 - B4A SINE B4 0 292 33 3 857 220 302 0 0 chr17 35682585 35682638 -59590013 - RSINE1 SINE B4 -30 135 83 3 857 712 172 23 19 chr17 35682650 35682916 -59589735 + (CATA)n Simple_repeat Simple_repeat 1 267 0 3 857 302 213 0 47 chr17 35682916 35682980 -59589671 + HAL1-3A_ME LINE L1 1975 2035 -823 3 857 373 284 0 0 chr17 35683034 35683115 -59589536 - RSINE1 SINE B4 -9 156 76 3 857 717 82 0 0 chr17 35684687 35684797 -59587854 + (CAGG)n Simple_repeat Simple_repeat 1 110 0 3 857 672 245 150 58 chr17 35684899 35685159 -59587492 + B4A SINE B4 9 292 0 3 857 330 233 308 0 chr17 35686078 35686237 -59586414 - Tigger7 DNA MER2_type -8 2483 2276 3 857 303 217 9 124 chr17 35686338 35686443 -59586208 - B3A SINE B2 -105 93 1 3 857 845 185 12 12 chr17 35687157 35687321 -59585330 + B3 SINE B2 2 165 -51 3 857 648 56 0 0 chr17 35687468 35687557 -59585094 + (TC)n Simple_repeat Simple_repeat 1 89 0 3 857 1166 78 0 12 chr17 35687558 35687727 -59584924 - B2_Mm2 SINE B2 -26 169 3 3 857 263 93 0 23 chr17 35689812 35689856 -59582795 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 3 857 360 198 176 0 chr17 35689857 35689948 -59582703 - PB1D10 SINE Alu 0 117 11 3 857 670 172 0 69 chr17 35690245 35690376 -59582275 - B1_Mur4 SINE Alu -27 123 2 3 857 348 162 0 180 chr17 35690262 35690390 -59582261 - MT2B LTR ERVL -343 258 154 3 857 265 313 0 0 chr17 35694740 35694823 -59577828 + RSINE1 SINE B4 4 86 -79 3 857 1174 39 0 19 chr17 35694749 35694905 -59577746 + B2_Mm2 SINE B2 12 164 -31 3 857 491 90 13 0 chr17 35694907 35694985 -59577666 + (TA)n Simple_repeat Simple_repeat 2 80 0 3 857 768 190 28 0 chr17 35695129 35695271 -59577380 + B1_Mur2 SINE Alu 4 149 0 3 857 701 247 6 24 chr17 35695493 35695659 -59576992 + RSINE1 SINE B4 3 165 0 3 857 412 257 38 9 chr17 35695727 35695833 -59576818 + B1F1 SINE Alu 7 115 -34 3 857 345 279 3 0 chr17 35695837 35695923 -59576728 + ID4_ SINE ID 2 89 -63 3 857 2978 50 2 15 chr17 35695957 35696364 -59576287 + MTB_Mm LTR MaLR 1 402 -5 3 857 297 0 0 0 chr17 35696364 35696397 -59576254 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 857 910 245 9 26 chr17 35696406 35696469 -59576182 - ID_B1 SINE B4 -2 222 165 3 857 1968 175 68 0 chr17 35696469 35696863 -59575788 + MTC LTR MaLR 1 421 0 3 857 910 245 9 26 chr17 35696863 35697025 -59575626 - ID_B1 SINE B4 -60 164 1 3 857 286 242 118 29 chr17 35697050 35697152 -59575499 - MLT1A1 LTR MaLR -7 401 291 3 857 768 204 7 0 chr17 35697231 35697373 -59575278 - B1_Mur2 SINE Alu -6 143 1 3 857 1196 93 48 21 chr17 35697445 35697631 -59575020 - B2_Mm2 SINE B2 -4 191 1 4 857 465 101 14 0 chr17 35697658 35697727 -59574924 + BC1_Mm scRNA scRNA 2 71 -81 4 857 189 0 0 0 chr17 35697729 35697750 -59574901 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 4 857 560 265 92 16 chr17 35697802 35697986 -59574665 - B3A SINE B2 0 198 1 4 857 483 270 23 38 chr17 35698007 35698138 -59574513 - B1F SINE Alu -5 144 16 4 857 748 250 28 6 chr17 35699137 35699318 -59573333 - B3 SINE B2 -3 213 29 4 857 847 145 7 0 chr17 35699326 35699464 -59573187 + B1_Mus1 SINE Alu 10 148 0 4 857 434 300 66 81 chr17 35699576 35699848 -59572803 + MLT1E2 LTR MaLR 23 293 -212 4 857 1215 121 5 55 chr17 35699849 35700067 -59572584 - RLTR11B LTR ERVK 0 453 247 4 857 800 154 34 0 chr17 35700072 35700221 -59572430 + RLTR11A2 LTR ERVK 374 527 0 4 857 342 320 32 8 chr17 35700221 35700345 -59572306 + MLT1E2 LTR MaLR 289 415 -90 4 857 794 202 18 24 chr17 35700363 35700530 -59572121 + B3A SINE B2 3 168 -30 4 857 480 18 0 0 chr17 35700556 35700613 -59572038 + (CA)n Simple_repeat Simple_repeat 1 57 0 4 857 820 28 0 27 chr17 35700635 35700745 -59571906 + B2_Mm2 SINE B2 3 109 -86 4 857 1639 177 95 24 chr17 35700745 35701127 -59571524 + RMER16 LTR ERVK 1 533 0 4 857 737 186 0 80 chr17 35701127 35701302 -59571349 + RMER16-int LTR ERVK 1 161 -5245 4 857 2865 116 41 13 chr17 35701328 35701377 -59571274 + RMER16-int LTR ERVK 146 195 -5211 4 857 1046 109 0 0 chr17 35701377 35701524 -59571127 - B1_Mus1 SINE Alu -1 147 1 4 857 4734 104 91 25 chr17 35701524 35702400 -59570251 + RMER16-int LTR ERVK 196 1119 -4287 4 857 2880 62 0 0 chr17 35702400 35702784 -59569867 + L1Md_F2 LINE L1 6199 6582 0 4 857 4734 93 32 37 chr17 35702784 35703080 -59569571 + RMER16-int LTR ERVK 1120 1425 -3981 4 857 6045 106 33 28 chr17 35703141 35704122 -59568529 + RMER16-int LTR ERVK 1327 2312 -3094 4 857 338 24 0 0 chr17 35704148 35704190 -59568461 + RMER16-int LTR ERVK 2285 2326 -3080 4 857 1256 105 16 0 chr17 35707035 35707051 -59565600 - B2_Mm2 SINE B2 0 195 180 4 857 1181 48 0 0 chr17 35707051 35707196 -59565455 - B1_Mm SINE Alu -1 146 2 4 857 1256 105 16 0 chr17 35707196 35707370 -59565281 - B2_Mm2 SINE B2 -16 179 3 4 857 182 191 21 0 chr17 35707547 35707594 -59565057 + (TCCA)n Simple_repeat Simple_repeat 1 48 0 4 857 514 222 26 0 chr17 35708543 35708660 -59563991 - B3 SINE B2 -6 210 91 4 857 1166 167 112 40 chr17 35708657 35708907 -59563744 - MTD LTR MaLR -67 352 85 4 857 274 237 133 10 chr17 35709287 35709385 -59563266 - L1MB8 LINE L1 -162 6016 5907 4 857 219 69 0 0 chr17 35709439 35709468 -59563183 + (TTC)n Simple_repeat Simple_repeat 2 30 0 4 857 387 41 0 0 chr17 35709484 35709533 -59563118 + (TTA)n Simple_repeat Simple_repeat 2 50 0 4 857 274 274 0 92 chr17 35709533 35709658 -59562993 - PB1D10 SINE Alu -11 106 1 4 857 531 283 38 44 chr17 35709750 35709909 -59562742 + RSINE1 SINE B4 8 165 0 4 857 221 313 61 87 chr17 35709909 35709944 -59562707 + B3A SINE B2 8 196 -2 4 857 1399 70 0 5 chr17 35709944 35710131 -59562520 - B2_Mm2 SINE B2 -9 186 1 4 857 22 0 0 0 chr17 35710142 35710164 -59562487 + AT_rich Low_complexity Low_complexity 1 22 0 4 857 725 115 325 0 chr17 35710170 35710327 -59562324 - B3 SINE B2 -6 210 3 4 857 893 183 3 0 chr17 35710797 35711132 -59561519 + CT-rich Low_complexity Low_complexity 1 336 0 4 857 842 231 35 15 chr17 35711216 35711418 -59561233 - B3 SINE B2 -6 210 5 4 857 306 307 0 0 chr17 35711531 35711606 -59561045 + BC1_Mm scRNA scRNA 14 88 -64 4 857 388 255 37 28 chr17 35711705 35711814 -59560837 - ID_B1 SINE B4 -1 223 114 4 857 183 184 0 0 chr17 35711818 35711856 -59560795 + (TATATG)n Simple_repeat Simple_repeat 3 40 0 4 857 251 203 94 6 chr17 35711862 35712021 -59560630 + (TA)n Simple_repeat Simple_repeat 1 173 0 4 857 336 24 0 0 chr17 35712021 35712062 -59560589 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 857 662 209 0 0 chr17 35712076 35712191 -59560460 + PB1D9 SINE Alu 2 116 -4 4 857 315 233 43 22 chr17 35713178 35713270 -59559381 + B4 SINE B4 2 95 -197 4 857 1108 188 43 10 chr17 35713270 35713479 -59559172 + B3 SINE B2 1 216 0 4 857 1323 45 33 22 chr17 35713525 35713709 -59558942 - B2_Mm2 SINE B2 -9 186 1 4 857 594 246 71 71 chr17 35713725 35713922 -59558729 + B4 SINE B4 82 278 -14 4 857 347 276 75 30 chr17 35714413 35714573 -59558078 + MIR SINE MIR 57 227 -41 4 857 812 82 54 0 chr17 35715669 35715805 -59556846 + B2_Mm2 SINE B2 3 156 -42 4 857 752 291 58 42 chr17 35715839 35716251 -59556400 - L1MB4 LINE L1 0 6180 5764 4 857 1256 94 11 0 chr17 35716255 35716436 -59556215 - B2_Mm1t SINE B2 -9 184 2 4 857 2507 187 87 165 chr17 35716611 35716698 -59555953 - RLTR40 LTR ERVK -13 804 713 4 857 342 0 0 0 chr17 35716698 35716736 -59555915 + (GA)n Simple_repeat Simple_repeat 2 39 0 4 857 2507 187 87 165 chr17 35716736 35717224 -59555427 - RLTR40 LTR ERVK -105 712 252 4 857 1144 90 22 22 chr17 35717224 35717405 -59555246 + B2_Mm2 SINE B2 1 181 -14 4 857 2507 187 87 165 chr17 35717405 35717518 -59555133 - RLTR40 LTR ERVK -566 251 178 4 857 790 92 138 0 chr17 35717518 35717648 -59555003 - B1_Mur3 SINE Alu 0 149 2 4 857 2507 187 87 165 chr17 35717648 35717829 -59554822 - RLTR40 LTR ERVK -640 177 3 4 857 482 205 0 0 chr17 35717829 35717912 -59554739 - RSINE1 SINE B4 -81 84 2 4 857 441 0 0 0 chr17 35718065 35718114 -59554537 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 857 361 202 38 12 chr17 35718145 35718225 -59554426 - RSINE1 SINE B4 -70 95 14 4 857 330 241 0 12 chr17 35718235 35718315 -59554336 - RCHARR1 DNA MER1_type -37 937 859 4 857 519 44 0 0 chr17 35718340 35718408 -59554243 + B1_Mur4 SINE Alu 72 139 -11 4 857 180 0 0 0 chr17 35718408 35718428 -59554223 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 4 857 1214 99 16 10 chr17 35718789 35718983 -59553668 + B2_Mm2 SINE B2 1 195 0 4 857 692 285 11 26 chr17 35718992 35719183 -59553468 + B3A SINE B2 8 195 -3 4 857 27 29 0 0 chr17 35719735 35719769 -59552882 + AT_rich Low_complexity Low_complexity 1 34 0 4 857 1108 62 0 7 chr17 35719770 35719917 -59552734 + B1_Mus2 SINE Alu 2 147 0 4 857 700 230 35 56 chr17 35719971 35720169 -59552482 - B3A SINE B2 -2 196 3 4 857 345 331 49 8 chr17 35720188 35720310 -59552341 - L1MEg LINE L1 -4119 1965 1839 4 857 1053 37 0 0 chr17 35720324 35720459 -59552192 - B1_Mus2 SINE Alu 0 147 13 4 857 231 234 139 0 chr17 35720364 35720501 -59552150 - ORR1B1-int LTR MaLR -755 754 599 4 857 1212 73 0 0 chr17 35720635 35720799 -59551852 + (TTC)n Simple_repeat Simple_repeat 2 165 0 4 857 1163 36 0 0 chr17 35720802 35720941 -59551710 - B1_Mus2 SINE Alu -7 140 2 4 857 805 244 5 14 chr17 35720969 35721177 -59551474 - B3 SINE B2 -10 206 1 4 857 753 254 52 5 chr17 35721968 35722162 -59550489 - B3 SINE B2 -13 203 1 4 857 411 56 0 0 chr17 35722187 35722241 -59550410 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 857 584 217 8 34 chr17 35722243 35722362 -59550289 - RSINE1 SINE B4 -48 117 2 4 857 530 248 16 0 chr17 35722373 35722494 -59550157 - ID_B1 SINE B4 -8 216 94 4 857 210 91 0 0 chr17 35723400 35723433 -59549218 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 4 857 685 152 9 26 chr17 35723443 35723558 -59549093 - PB1D10 SINE Alu 0 117 5 4 857 302 213 0 0 chr17 35723662 35723723 -59548928 - B3 SINE B2 -86 130 70 4 857 279 259 0 0 chr17 35723723 35723889 -59548762 + (TG)n Simple_repeat Simple_repeat 1 166 0 4 857 220 198 10 165 chr17 35723901 35724004 -59548647 - RSINE1 SINE B4 0 165 79 4 857 494 254 20 92 chr17 35723981 35724133 -59548518 - B4A SINE B4 -151 141 1 4 857 1078 211 35 0 chr17 35724153 35724352 -59548299 - B3 SINE B2 -10 206 1 4 857 851 258 11 0 chr17 35724391 35724569 -59548082 - B3A SINE B2 -18 180 1 4 857 1034 206 23 0 chr17 35724703 35724921 -59547730 - ID_B1 SINE B4 0 224 2 4 857 446 210 9 83 chr17 35724937 35725008 -59547643 + PB1D10 SINE Alu 17 82 -35 4 857 2492 49 68 3 chr17 35725008 35725315 -59547336 - ORR1A2 LTR MaLR 0 327 1 4 857 446 210 9 83 chr17 35725315 35725352 -59547299 + PB1D10 SINE Alu 83 117 0 4 857 395 100 0 33 chr17 35725914 35726031 -59546620 - B2_Mm2 SINE B2 0 195 47 4 857 1330 85 11 0 chr17 35726062 35726239 -59546412 - B2_Mm1t SINE B2 -13 180 2 4 857 189 0 0 0 chr17 35726258 35726279 -59546372 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 4 857 624 184 0 10 chr17 35726279 35726383 -59546268 - B1F2 SINE Alu -10 139 37 4 857 1250 191 5 14 chr17 35726443 35726661 -59545990 - B3 SINE B2 0 216 1 4 857 1443 45 0 0 chr17 35726661 35726840 -59545811 + (TTC)n Simple_repeat Simple_repeat 2 180 0 4 857 520 237 82 0 chr17 35727139 35727274 -59545377 + ID_B1 SINE B4 79 224 0 4 857 231 114 0 0 chr17 35727283 35727318 -59545333 + (CACG)n Simple_repeat Simple_repeat 2 36 0 4 857 183 211 135 0 chr17 35727527 35727579 -59545072 - MIRm SINE MIR -126 150 92 4 857 373 320 58 13 chr17 35727583 35727738 -59544913 + MER104 DNA Tc2 2 163 -18 4 857 221 208 0 117 chr17 35728463 35728501 -59544150 + B3A SINE B2 1 36 -162 4 857 1197 68 0 0 chr17 35728501 35728648 -59544003 - B1_Mus1 SINE Alu 0 148 2 4 857 221 208 0 117 chr17 35728648 35728669 -59543982 + B3A SINE B2 37 53 -145 4 857 413 229 152 8 chr17 35729548 35729680 -59542971 + RSINE1 SINE B4 5 155 -10 4 857 189 0 0 0 chr17 35729716 35729737 -59542914 + (T)n Simple_repeat Simple_repeat 1 21 0 4 857 1301 27 0 0 chr17 35729737 35729883 -59542768 - B1_Mm SINE Alu 0 147 2 4 857 706 241 190 0 chr17 35729896 35730070 -59542581 - B3 SINE B2 -9 207 1 4 857 312 205 44 13 chr17 35730192 35730350 -59542301 + (TA)n Simple_repeat Simple_repeat 1 163 0 4 857 33 43 0 0 chr17 35730368 35730415 -59542236 + AT_rich Low_complexity Low_complexity 1 47 0 4 857 479 244 24 24 chr17 35730428 35730554 -59542097 - B3 SINE B2 -2 214 89 4 857 714 33 0 11 chr17 35730624 35730715 -59541936 + B1_Mus2 SINE Alu 57 146 -1 5 857 737 51 10 0 chr17 35730715 35730813 -59541838 + (GGAAA)n Simple_repeat Simple_repeat 3 101 0 5 857 233 275 111 12 chr17 35731358 35731439 -59541212 + RMER6B LTR ERVK 368 456 -5 5 857 249 259 0 0 chr17 35731451 35731509 -59541142 - B3 SINE B2 -129 87 30 4 857 695 74 10 10 chr17 35731686 35731782 -59540869 + B1_Mur3 SINE Alu 54 149 0 5 857 433 286 77 77 chr17 35731978 35732118 -59540533 + MTEb LTR MaLR 31 170 -209 5 857 904 197 6 6 chr17 35732118 35732276 -59540375 + B3 SINE B2 2 159 -57 5 857 261 0 0 0 chr17 35732288 35732317 -59540334 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 857 222 37 0 0 chr17 35732317 35732344 -59540307 + (GA)n Simple_repeat Simple_repeat 1 27 0 5 857 708 261 22 84 chr17 35732344 35732570 -59540081 + MTEb LTR MaLR 168 379 0 5 857 318 250 0 0 chr17 35732591 35732659 -59539992 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 5 857 199 203 27 0 chr17 35733113 35733187 -59539464 + (TA)n Simple_repeat Simple_repeat 1 76 0 5 857 820 265 37 0 chr17 35733187 35733376 -59539275 - B3 SINE B2 -13 203 8 5 857 941 239 37 18 chr17 35733381 35733598 -59539053 - ID_B1 SINE B4 -2 222 2 5 857 348 244 89 0 chr17 35733598 35733681 -59538970 - B1F1 SINE Alu -58 91 1 5 857 1254 99 5 40 chr17 35733685 35733884 -59538767 - B2_Mm2 SINE B2 -2 193 2 5 857 259 242 38 53 chr17 35733921 35734052 -59538599 + CT-rich Low_complexity Low_complexity 5 133 0 5 857 737 244 66 0 chr17 35734138 35734335 -59538316 + ORR1D2 LTR MaLR 1 210 -160 5 857 597 251 17 63 chr17 35734335 35734509 -59538142 + Lx8 LINE L1 7107 7272 -201 5 857 1163 49 0 21 chr17 35735585 35735730 -59536921 - B1_Mus2 SINE Alu -3 144 3 5 857 666 0 0 0 chr17 35735738 35735812 -59536839 + (TTC)n Simple_repeat Simple_repeat 2 75 0 5 857 26 0 0 0 chr17 35735857 35735883 -59536768 + AT_rich Low_complexity Low_complexity 1 26 0 5 857 1558 67 0 5 chr17 35735883 35736078 -59536573 - B2_Mm2 SINE B2 -1 194 1 5 857 874 235 65 0 chr17 35736078 35736278 -59536373 - B3 SINE B2 -2 214 2 5 857 667 179 0 17 chr17 35736440 35736559 -59536092 - PB1D9 SINE Alu -1 119 3 5 857 437 262 0 6 chr17 35736746 35736911 -59535740 + (TG)n Simple_repeat Simple_repeat 2 165 0 5 857 238 303 7 7 chr17 35736959 35737112 -59535539 + (TG)n Simple_repeat Simple_repeat 2 154 0 5 857 876 244 43 80 chr17 35737119 35737195 -59535456 - B4A SINE B4 0 292 220 5 857 1015 128 204 11 chr17 35737195 35737376 -59535275 - B3 SINE B2 0 216 1 5 857 876 244 43 80 chr17 35737376 35737598 -59535053 - B4A SINE B4 -73 219 5 5 857 264 292 179 0 chr17 35737612 35737718 -59534933 - PB1 SINE Alu -2 125 1 5 857 545 288 73 37 chr17 35738336 35738527 -59534124 + MTD LTR MaLR 6 203 -216 5 857 543 101 0 0 chr17 35738539 35738618 -59534033 + (GA)n Simple_repeat Simple_repeat 2 80 0 5 857 317 221 308 68 chr17 35738618 35738764 -59533887 + MTD LTR MaLR 181 361 -46 5 857 238 185 47 70 chr17 35739899 35740027 -59532624 + (TTATA)n Simple_repeat Simple_repeat 1 125 0 5 857 464 321 77 24 chr17 35740035 35740281 -59532370 - MIR SINE MIR 0 262 4 5 857 186 279 132 0 chr17 35740461 35740529 -59532122 + MER5A DNA MER1_type 111 187 -2 5 857 1257 76 35 0 chr17 35741464 35741636 -59531015 + B2_Mm1t SINE B2 2 179 -14 5 857 416 94 0 45 chr17 35741712 35741831 -59530820 + B2_Mm2 SINE B2 47 195 0 5 857 828 253 78 34 chr17 35741991 35742225 -59530426 + ID_B1 SINE B4 2 242 -50 5 857 862 162 145 34 chr17 35742336 35742515 -59530136 + B3 SINE B2 1 199 -17 5 857 216 288 40 27 chr17 35742624 35742699 -59529952 + MIR SINE MIR 153 228 -34 5 857 3664 122 13 8 chr17 35742701 35743526 -59529125 + Lx4B LINE L1 5357 6186 -872 5 857 709 176 86 29 chr17 35743747 35743887 -59528764 + B1_Mur4 SINE Alu 1 148 -2 5 857 835 130 301 30 chr17 35743899 35744065 -59528586 - B3 SINE B2 -4 212 2 5 857 23 33 0 0 chr17 35744089 35744119 -59528532 + AT_rich Low_complexity Low_complexity 1 30 0 5 857 1020 200 44 29 chr17 35744126 35744332 -59528319 - B3 SINE B2 -7 209 1 5 857 741 215 0 0 chr17 35744332 35744467 -59528184 - B1_Mur2 SINE Alu -1 148 14 5 857 361 232 58 0 chr17 35744657 35744726 -59527925 + ID4_ SINE ID 8 80 -3 5 857 1008 174 74 10 chr17 35744921 35745124 -59527527 + B3 SINE B2 1 216 0 5 857 367 125 52 29 chr17 35745221 35745394 -59527257 + (TG)n Simple_repeat Simple_repeat 1 177 0 5 857 263 168 38 19 chr17 35745414 35745580 -59527071 + (TG)n Simple_repeat Simple_repeat 1 169 0 5 857 24 32 0 0 chr17 35745746 35745777 -59526874 + AT_rich Low_complexity Low_complexity 1 31 0 5 857 781 212 5 81 chr17 35745790 35746000 -59526651 + B3A SINE B2 5 198 0 5 857 386 161 58 6 chr17 35746067 35746223 -59526428 + (TG)n Simple_repeat Simple_repeat 1 164 0 5 857 1069 264 23 90 chr17 35746235 35746447 -59526204 - B4 SINE B4 -4 288 83 5 857 675 261 37 16 chr17 35746447 35746634 -59526017 - B3A SINE B2 -7 191 1 5 857 1069 264 23 90 chr17 35746634 35746721 -59525930 - B4 SINE B4 -210 82 9 5 857 359 307 100 74 chr17 35746994 35747158 -59525493 + ERVL-E-int LTR ERVL 3382 3546 -2121 5 857 1277 163 18 0 chr17 35747158 35747233 -59525418 + URR1A DNA MER1_type 1 77 -149 5 857 1376 72 39 0 chr17 35747233 35747414 -59525237 - B2_Mm2 SINE B2 -5 190 3 5 857 1277 163 18 0 chr17 35747414 35747559 -59525092 + URR1A DNA MER1_type 78 224 -2 5 857 359 307 100 74 chr17 35747559 35747704 -59524947 + ERVL-E-int LTR ERVL 3547 3699 -1968 5 857 391 208 62 10 chr17 35748157 35748254 -59524397 + PB1D7 SINE Alu 12 113 -7 5 857 460 374 81 54 chr17 35748432 35748966 -59523685 - L1ME3 LINE L1 -7 6157 5594 5 857 768 198 89 30 chr17 35748975 35749178 -59523473 + B3 SINE B2 1 215 -1 5 857 22 0 0 0 chr17 35749180 35749202 -59523449 + AT_rich Low_complexity Low_complexity 1 22 0 5 857 330 306 20 2 chr17 35749211 35749327 -59523324 - L1ME3 LINE L1 -868 5576 5452 5 857 303 28 0 0 chr17 35749483 35749519 -59523132 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 857 416 252 181 15 chr17 35749519 35749652 -59522999 - B3A SINE B2 -39 159 5 5 857 387 127 0 0 chr17 35749684 35749747 -59522904 + (TTCC)n Simple_repeat Simple_repeat 3 65 0 5 857 762 160 99 0 chr17 35749747 35749878 -59522773 - B1_Mur3 SINE Alu -5 144 1 5 857 336 133 0 0 chr17 35749972 35750032 -59522619 + (TC)n Simple_repeat Simple_repeat 1 60 0 5 857 411 259 18 18 chr17 35750032 35750146 -59522505 - PB1D9 SINE Alu -6 114 1 5 857 249 33 0 0 chr17 35750154 35750184 -59522467 + (TC)n Simple_repeat Simple_repeat 2 31 0 5 857 1003 54 123 0 chr17 35750190 35750320 -59522331 - B1_Mm SINE Alu 0 147 2 5 857 257 108 92 0 chr17 35750399 35750416 -59522235 - B2_Mm2 SINE B2 0 195 174 5 857 1127 36 65 0 chr17 35750416 35750555 -59522096 - B1_Mus1 SINE Alu 0 148 1 5 857 257 108 92 0 chr17 35750555 35750602 -59522049 - B2_Mm2 SINE B2 -22 173 126 5 857 270 0 0 0 chr17 35751259 35751289 -59521362 + (CAGA)n Simple_repeat Simple_repeat 1 30 0 5 857 252 292 98 24 chr17 35751297 35751420 -59521231 + MTEb LTR MaLR 59 190 -169 5 857 295 258 50 20 chr17 35751451 35751550 -59521101 + MTEb LTR MaLR 278 379 0 5 857 513 0 0 0 chr17 35751852 35751909 -59520742 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 857 267 240 20 0 chr17 35752035 35752085 -59520566 + RSINE1 SINE B4 2 52 -113 5 857 602 141 53 6 chr17 35752193 35752364 -59520287 + (CATA)n Simple_repeat Simple_repeat 1 179 0 5 857 637 110 53 14 chr17 35752409 35752695 -59519956 + (CATA)n Simple_repeat Simple_repeat 1 297 0 5 857 992 236 209 6 chr17 35752974 35753290 -59519361 + MTD LTR MaLR 1 380 -39 5 857 351 0 0 0 chr17 35753290 35753329 -59519322 + (TGG)n Simple_repeat Simple_repeat 3 41 0 5 857 245 300 22 44 chr17 35753329 35753353 -59519298 + MTD LTR MaLR 364 389 -11 5 857 743 164 19 52 chr17 35753355 35753509 -59519142 - B1_Mur2 SINE Alu 0 149 1 5 857 496 174 116 17 chr17 35754046 35754188 -59518463 + ORR1D1 LTR MaLR 1 149 -245 5 857 228 296 7 34 chr17 35754193 35754340 -59518311 + (GTGTG)n Simple_repeat Simple_repeat 3 145 0 5 857 1257 233 49 31 chr17 35754344 35754667 -59517984 + ORR1D1 LTR MaLR 40 372 -2 5 857 537 239 142 0 chr17 35760361 35760495 -59512156 - B3 SINE B2 -63 153 1 5 857 2737 40 3 0 chr17 35760503 35760828 -59511823 - L1Md_T LINE L1 -1 6581 6256 5 857 243 0 0 0 chr17 35760874 35760901 -59511750 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 857 1018 92 109 19 chr17 35760974 35760988 -59511663 - B2_Mm2 SINE B2 -24 171 159 5 857 207 0 0 0 chr17 35760988 35761011 -59511640 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 5 857 1018 92 109 19 chr17 35761011 35761152 -59511499 - B2_Mm2 SINE B2 -37 158 2 5 857 219 319 29 0 chr17 35761224 35761293 -59511358 + BC1_Mm scRNA scRNA 2 72 -80 5 857 300 218 0 0 chr17 35761318 35761373 -59511278 + HAL1-3A_ME LINE L1 1976 2030 -828 5 857 471 228 75 40 chr17 35761446 35761619 -59511032 - MTD LTR MaLR -8 413 245 5 857 523 264 201 28 chr17 35761653 35761832 -59510819 + B3 SINE B2 1 210 -6 5 857 399 214 44 11 chr17 35761967 35762057 -59510594 - PB1D7 SINE Alu -7 113 21 5 857 340 260 78 0 chr17 35762420 35762539 -59510112 - BC1_Mm scRNA scRNA -22 130 1 5 857 401 323 71 0 chr17 35762557 35762684 -59509967 - B1F SINE Alu -3 146 11 5 857 1496 55 16 0 chr17 35762826 35763009 -59509642 + B2_Mm2 SINE B2 3 188 -7 5 857 1345 266 53 48 chr17 35764141 35764204 -59508447 - MTD LTR MaLR -2 417 355 5 857 333 0 0 0 chr17 35764204 35764241 -59508410 + (ATTG)n Simple_repeat Simple_repeat 1 37 0 5 857 1345 266 53 48 chr17 35764241 35764575 -59508076 - MTD LTR MaLR -65 354 18 5 857 227 269 55 55 chr17 35764601 35764711 -59507940 - MLT1A LTR MaLR -38 336 227 5 857 228 345 0 0 chr17 35764724 35764840 -59507811 + (CATGT)n Simple_repeat Simple_repeat 2 117 0 5 857 380 269 61 53 chr17 35765864 35765978 -59506673 - PB1D10 SINE Alu -1 116 2 5 857 324 327 22 136 chr17 35765978 35766069 -59506582 - ID SINE ID -142 82 13 5 857 674 250 7 0 chr17 35766224 35766360 -59506291 + ID_B1 SINE B4 82 218 -6 5 857 216 0 0 0 chr17 35766384 35766408 -59506243 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 857 1298 62 44 17 chr17 35766506 35766687 -59505964 - B2_Mm1a SINE B2 -7 186 1 6 857 362 221 0 0 chr17 35766956 35767024 -59505627 - PB1D9 SINE Alu -50 70 3 6 857 311 60 0 20 chr17 35767041 35767092 -59505559 + (CAAAAA)n Simple_repeat Simple_repeat 2 51 0 6 857 775 225 0 0 chr17 35767098 35767240 -59505411 + B1_Mur3 SINE Alu 2 143 -6 6 857 21 0 0 0 chr17 35767375 35767396 -59505255 + AT_rich Low_complexity Low_complexity 1 21 0 6 857 837 264 75 0 chr17 35767407 35767608 -59505043 + B3 SINE B2 1 216 0 6 857 753 210 29 0 chr17 35767751 35767889 -59504762 + B1_Mur1 SINE Alu 3 144 -5 6 857 677 197 37 42 chr17 35768538 35768720 -59503931 - MTD LTR MaLR -15 404 199 6 857 484 321 8 15 chr17 35768783 35768916 -59503735 + RSINE1 SINE B4 17 148 -17 6 857 23 25 0 24 chr17 35768946 35768974 -59503677 + AT_rich Low_complexity Low_complexity 1 28 0 6 857 1147 63 0 21 chr17 35768974 35769119 -59503532 + B1_Mus1 SINE Alu 2 143 -5 6 857 23 25 0 24 chr17 35769119 35769131 -59503520 + AT_rich Low_complexity Low_complexity 1 12 0 6 857 3799 91 71 35 chr17 35769303 35769881 -59502770 + MT2B LTR ERVL 3 601 0 6 857 1902 151 27 99 chr17 35770546 35770988 -59501663 + RMER17C LTR ERVK 1 410 0 6 857 207 0 0 0 chr17 35772130 35772153 -59500498 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 857 621 270 54 7 chr17 35772215 35772364 -59500287 + B3A SINE B2 1 156 -42 6 857 531 0 0 0 chr17 35772383 35772442 -59500209 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 857 681 13 0 0 chr17 35773167 35773245 -59499406 + (TC)n Simple_repeat Simple_repeat 1 78 0 6 857 486 0 0 0 chr17 35775573 35775627 -59497024 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 857 180 185 0 0 chr17 35776985 35777012 -59495639 + L4 LINE RTE 1080 1106 -923 6 857 292 329 172 36 chr17 35777014 35777317 -59495334 + ORR1D1 LTR MaLR 23 366 -8 6 857 486 0 0 0 chr17 35777339 35777393 -59495258 + (TTTC)n Simple_repeat Simple_repeat 2 55 0 6 857 1038 41 0 0 chr17 35777393 35777516 -59495135 - B1_Mm SINE Alu -9 138 16 6 857 473 248 71 77 chr17 35777419 35777589 -59495062 - MT2B LTR ERVL -337 264 96 6 857 298 288 30 67 chr17 35777684 35777818 -59494833 - MIRb SINE MIR -72 196 68 6 857 1301 108 0 35 chr17 35777970 35778160 -59494491 + B2_Mm2 SINE B2 2 185 -10 6 857 384 22 0 0 chr17 35778160 35778205 -59494446 + (GA)n Simple_repeat Simple_repeat 2 46 0 6 857 208 219 0 0 chr17 35778703 35778744 -59493907 + C-rich Low_complexity Low_complexity 1 41 0 6 857 1259 27 7 0 chr17 35779083 35779229 -59493422 + B1_Mus2 SINE Alu 1 147 0 6 857 706 58 19 10 chr17 35779608 35779712 -59492939 + (TTCC)n Simple_repeat Simple_repeat 4 108 0 6 857 1169 69 7 0 chr17 35779733 35779877 -59492774 - B1_Mus1 SINE Alu -2 146 2 6 857 222 351 91 28 chr17 35780100 35780276 -59492375 + MIRb SINE MIR 75 261 -7 6 857 1229 112 37 5 chr17 35782467 35782655 -59489996 - B2_Mm2 SINE B2 0 195 2 6 858 891 220 74 10 chr17 35783044 35783246 -59489405 - B3 SINE B2 0 216 2 6 858 22 0 0 0 chr17 35783251 35783273 -59489378 + AT_rich Low_complexity Low_complexity 1 22 0 6 858 231 61 0 0 chr17 35783323 35783356 -59489295 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 858 533 273 7 29 chr17 35783375 35783511 -59489140 - ID_B1 SINE B4 -8 216 84 6 858 205 264 68 27 chr17 35783702 35783776 -59488875 - MIRb SINE MIR -157 111 35 6 858 302 190 17 17 chr17 35784105 35784164 -59488487 - BC1_Mm scRNA scRNA -81 71 13 6 858 1447 60 54 0 chr17 35784702 35784886 -59487765 - B2_Mm2 SINE B2 0 195 2 6 858 1297 112 11 5 chr17 35785681 35785870 -59486781 + B2_Mm1t SINE B2 2 191 -2 6 858 939 151 0 14 chr17 35785881 35786029 -59486622 + B1_Mur4 SINE Alu 3 148 -2 6 858 324 239 30 0 chr17 35786049 35786116 -59486535 + B4A SINE B4 27 95 -197 6 858 1032 206 54 5 chr17 35786118 35786323 -59486328 + B3 SINE B2 2 216 0 6 858 630 214 7 65 chr17 35788440 35788569 -59484082 + B1_Mus2 SINE Alu 1 124 -23 6 858 3615 15 2 0 chr17 35788569 35788964 -59483687 + MTA_Mm LTR MaLR 1 396 0 6 858 630 214 7 65 chr17 35788964 35788989 -59483662 + B1_Mus2 SINE Alu 125 146 -1 6 858 349 160 211 54 chr17 35790266 35790423 -59482228 - B3A SINE B2 -15 180 1 6 858 228 257 14 14 chr17 35790723 35790794 -59481857 + ID4 SINE ID 1 71 -12 6 858 226 264 163 11 chr17 35792447 35792539 -59480112 + MLT1J LTR MaLR 71 176 -336 6 858 426 229 310 6 chr17 35794516 35794674 -59477977 - B3 SINE B2 -9 207 2 6 858 399 196 11 32 chr17 35794686 35794781 -59477870 - B1_Mur2 SINE Alu 0 149 57 6 858 304 216 87 43 chr17 35794829 35794921 -59477730 + PB1D9 SINE Alu 2 97 -23 6 858 214 215 290 58 chr17 35797862 35798000 -59474651 + B4 SINE B4 49 218 -74 6 858 506 140 94 57 chr17 35797908 35798014 -59474637 + PB1D9 SINE Alu 11 120 0 6 858 517 280 32 51 chr17 35798149 35798307 -59474344 - RSINE1 SINE B4 0 165 11 6 858 514 251 0 50 chr17 35799246 35799598 -59473053 + C-rich Low_complexity Low_complexity 1 334 0 6 858 514 237 0 51 chr17 35799610 35799788 -59472863 + C-rich Low_complexity Low_complexity 2 170 0 6 858 302 221 0 44 chr17 35799800 35799929 -59472722 + C-rich Low_complexity Low_complexity 1 123 0 6 858 203 138 0 0 chr17 35800580 35800609 -59472042 + (AGGGGG)n Simple_repeat Simple_repeat 4 32 0 6 858 582 212 58 14 chr17 35800688 35800827 -59471824 - B1F2 SINE Alu -2 147 3 6 858 329 274 240 0 chr17 35802118 35802264 -59470387 + RMER30 DNA MER1_type 20 200 -2 6 858 315 104 0 0 chr17 35802303 35802351 -59470300 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 858 588 176 151 0 chr17 35803300 35803419 -59469232 + B1_Mus2 SINE Alu 2 138 -9 6 858 315 0 0 0 chr17 35803420 35803455 -59469196 + (TTA)n Simple_repeat Simple_repeat 2 36 0 6 858 1000 99 180 0 chr17 35805630 35805791 -59466860 + B2_Mm1t SINE B2 2 191 -2 6 858 316 306 30 61 chr17 35808536 35808668 -59463983 - ID_B1 SINE B4 0 224 97 6 858 189 74 0 0 chr17 35808685 35808712 -59463939 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 858 515 191 164 44 chr17 35809139 35809415 -59463236 - RMER6B LTR ERVK -81 380 2 6 858 430 256 0 0 chr17 35809921 35810007 -59462644 - ID_B1 SINE B4 -23 201 116 6 858 357 24 0 0 chr17 35811009 35811051 -59461600 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 6 858 1247 41 0 0 chr17 35811065 35811211 -59461440 - B1_Mm SINE Alu 0 147 2 6 858 491 236 4 0 chr17 35811345 35811446 -59461205 - B3 SINE B2 -72 126 22 6 858 1207 49 0 0 chr17 35811692 35811834 -59460817 + B1_Mm SINE Alu 1 142 -5 6 858 279 0 0 0 chr17 35811839 35811870 -59460781 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 858 210 86 29 0 chr17 35811998 35812033 -59460618 + RSINE1 SINE B4 4 39 -126 6 858 416 167 73 108 chr17 35812536 35812660 -59459991 + B3A SINE B2 93 195 -3 6 858 1250 48 0 0 chr17 35812697 35812844 -59459807 + B1_Mus2 SINE Alu 1 147 0 6 858 624 176 62 68 chr17 35812959 35813105 -59459546 + B1_Mur2 SINE Alu 5 149 0 6 858 1225 61 0 0 chr17 35813196 35813343 -59459308 + B1_Mus1 SINE Alu 2 148 0 6 858 3717 42 5 2 chr17 35813383 35813818 -59458833 + RLTR10C LTR ERVK 1 436 0 6 858 662 228 0 29 chr17 35813822 35813962 -59458689 + B1_Mur3 SINE Alu 1 136 -13 6 858 1539 58 16 5 chr17 35814031 35814223 -59458428 + B2_Mm2 SINE B2 2 195 0 6 858 192 111 0 0 chr17 35814285 35814321 -59458330 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 6 858 1282 27 0 0 chr17 35814322 35814468 -59458183 - B1_Mm SINE Alu 0 147 2 6 858 26 30 0 0 chr17 35815136 35815169 -59457482 + AT_rich Low_complexity Low_complexity 1 33 0 6 858 297 0 0 0 chr17 35815177 35815210 -59457441 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 6 858 423 218 36 199 chr17 35815213 35815297 -59457354 - ID_B1 SINE B4 -7 217 146 6 858 628 120 222 0 chr17 35815297 35815414 -59457237 + B1_Mus1 SINE Alu 3 145 -3 6 858 423 218 36 199 chr17 35815414 35815495 -59457156 - ID_B1 SINE B4 -79 145 79 6 858 28 29 0 0 chr17 35815509 35815544 -59457107 + AT_rich Low_complexity Low_complexity 1 35 0 6 858 1463 54 43 0 chr17 35815574 35815758 -59456893 - B2_Mm2 SINE B2 0 195 4 6 858 908 212 48 33 chr17 35815761 35815971 -59456680 - B3 SINE B2 -2 214 2 6 858 1193 62 7 0 chr17 35816125 35816270 -59456381 - B1_Mus2 SINE Alu -1 146 1 6 858 726 208 28 0 chr17 35816696 35816840 -59455811 + B1_Mur1 SINE Alu 2 149 0 6 858 453 162 0 29 chr17 35816869 35816939 -59455712 + ID4_ SINE ID 1 68 -15 6 858 496 239 67 17 chr17 35817009 35817128 -59455523 + RSINE1 SINE B4 32 156 -9 6 858 25 31 0 0 chr17 35817134 35817166 -59455485 + AT_rich Low_complexity Low_complexity 1 32 0 6 858 387 269 99 8 chr17 35817166 35817297 -59455354 + ID_B1 SINE B4 77 219 -5 6 858 758 79 383 7 chr17 35817428 35817569 -59455082 + B2_Mm2 SINE B2 1 194 -1 6 858 328 385 10 19 chr17 35817846 35818055 -59454596 - L3 LINE CR1 -505 3984 3778 6 858 381 22 0 0 chr17 35820002 35820048 -59452603 + (TC)n Simple_repeat Simple_repeat 1 46 0 6 858 1379 64 31 21 chr17 35820048 35820239 -59452412 - B2_Mm2 SINE B2 -1 194 2 6 858 770 239 153 38 chr17 35821576 35821923 -59450728 - Lx9 LINE L1 -3 7641 7255 6 858 268 304 34 34 chr17 35823682 35823859 -59448792 + (TGGA)n Simple_repeat Simple_repeat 4 180 0 7 858 562 215 14 0 chr17 35824874 35825157 -59447494 + (CA)n Simple_repeat Simple_repeat 1 287 0 7 858 195 204 0 0 chr17 35825215 35825264 -59447387 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 858 326 266 7 0 chr17 35825333 35825472 -59447179 + (CA)n Simple_repeat Simple_repeat 1 140 0 7 858 303 337 20 20 chr17 35826133 35826233 -59446418 + PB1D10 SINE Alu 18 117 0 7 858 763 127 0 48 chr17 35826272 35826396 -59446255 + PB1D9 SINE Alu 3 120 0 7 858 261 0 0 0 chr17 35826412 35826441 -59446210 + (CATA)n Simple_repeat Simple_repeat 4 32 0 7 858 384 325 8 0 chr17 35827415 35827538 -59445113 - ID_B1 SINE B4 -1 223 100 7 858 235 237 34 0 chr17 35827575 35827634 -59445017 + MER91B DNA Tip100 124 184 -6 7 858 251 368 0 0 chr17 35827742 35827829 -59444822 + (CATA)n Simple_repeat Simple_repeat 4 90 0 7 858 437 269 6 0 chr17 35827861 35828021 -59444630 + (CA)n Simple_repeat Simple_repeat 1 161 0 7 858 213 65 0 0 chr17 35829273 35829304 -59443347 + (T)n Simple_repeat Simple_repeat 1 31 0 7 858 223 118 55 73 chr17 35830081 35830136 -59442515 - B1F SINE Alu -23 126 73 7 858 471 270 95 0 chr17 35830266 35830406 -59442245 - ID_B1 SINE B4 -66 158 3 7 858 208 349 57 51 chr17 35831010 35831167 -59441484 - MIRb SINE MIR -13 255 98 7 858 341 361 10 45 chr17 35831200 35831467 -59441184 + L1M2 LINE L1 5177 5436 -738 7 858 452 286 25 0 chr17 35831474 35831593 -59441058 - B1F SINE Alu -1 148 27 7 858 1204 35 7 7 chr17 35831635 35831780 -59440871 - B1_Mm SINE Alu -1 146 2 7 858 1445 39 78 0 chr17 35831783 35831963 -59440688 - B2_Mm2 SINE B2 0 195 2 7 858 1063 73 36 0 chr17 35831969 35832106 -59440545 - B1_Mus2 SINE Alu -5 142 1 7 858 821 192 196 11 chr17 35832124 35832303 -59440348 + B3 SINE B2 1 212 -4 7 858 939 167 68 34 chr17 35832323 35832528 -59440123 - B3 SINE B2 -4 212 1 7 858 448 221 10 10 chr17 35832638 35832734 -59439917 + RSINE1 SINE B4 1 96 -69 7 858 207 0 0 0 chr17 35832763 35832786 -59439865 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 858 742 191 36 7 chr17 35832786 35832917 -59439734 - B1_Mur2 SINE Alu -10 139 4 7 858 360 0 0 0 chr17 35832951 35832991 -59439660 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 858 1109 172 20 5 chr17 35832991 35833190 -59439461 + B3 SINE B2 6 207 -9 7 858 276 100 0 0 chr17 35833190 35833230 -59439421 + (TAA)n Simple_repeat Simple_repeat 1 40 0 7 858 401 298 61 0 chr17 35833252 35833366 -59439285 + ID_B1 SINE B4 86 206 -18 7 858 295 308 74 37 chr17 35833366 35833387 -59439264 + B1F1 SINE Alu 5 144 -5 7 858 514 128 21 0 chr17 35833391 35833485 -59439166 + (GAAA)n Simple_repeat Simple_repeat 3 98 0 7 858 731 239 132 5 chr17 35833494 35833645 -59439006 + B3 SINE B2 2 153 -63 7 858 431 18 0 18 chr17 35833645 35833702 -59438949 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 858 731 239 132 5 chr17 35833702 35833739 -59438912 + B3 SINE B2 154 212 -4 7 858 187 247 146 73 chr17 35834216 35834312 -59438339 + MER5A DNA MER1_type 3 105 -84 7 858 28 0 0 0 chr17 35835893 35835921 -59436730 + AT_rich Low_complexity Low_complexity 1 28 0 7 858 1132 56 0 0 chr17 35835929 35836071 -59436580 - B1_Mm SINE Alu -5 142 1 7 858 589 160 9 0 chr17 35836148 35836254 -59436397 - U6 snRNA snRNA 0 107 1 7 858 233 218 10 139 chr17 35836338 35836439 -59436212 - MT2B2 LTR ERVL -319 265 178 7 858 512 187 0 0 chr17 35836352 35836443 -59436208 - PB1D9 SINE Alu -20 100 10 7 858 21 71 0 0 chr17 35837430 35837472 -59435179 + GC_rich Low_complexity Low_complexity 1 42 0 7 858 247 188 0 55 chr17 35837567 35837640 -59435011 + C-rich Low_complexity Low_complexity 3 71 0 7 858 218 29 0 56 chr17 35839555 35839591 -59433060 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 7 858 596 14 0 14 chr17 35839982 35840056 -59432595 + (GGAAA)n Simple_repeat Simple_repeat 3 75 0 7 858 240 35 0 0 chr17 35840429 35840458 -59432193 + (GGAA)n Simple_repeat Simple_repeat 4 32 0 7 858 1260 56 0 0 chr17 35840458 35840618 -59432033 + (GGGAGA)n Simple_repeat Simple_repeat 6 166 0 7 858 1318 85 26 0 chr17 35842398 35842587 -59430064 + B2_Mm2 SINE B2 1 194 -1 7 858 568 139 18 44 chr17 35843352 35843465 -59429186 - B1_Mur2 SINE Alu 0 149 40 7 858 228 118 18 89 chr17 35843415 35843471 -59429180 - RLTR25B LTR ERVK -543 485 434 7 858 333 0 0 0 chr17 35843572 35843609 -59429042 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 7 858 224 278 105 53 chr17 35843618 35843713 -59428938 + ID_B1 SINE B4 91 190 -34 7 858 502 249 75 27 chr17 35843678 35843864 -59428787 - B4 SINE B4 -97 195 1 7 858 225 220 33 17 chr17 35843864 35843911 -59428740 + ID_B1 SINE B4 168 215 -9 7 858 726 279 22 0 chr17 35843921 35844104 -59428547 + B3A SINE B2 1 187 -11 7 858 958 203 63 19 chr17 35844217 35844423 -59428228 + B3 SINE B2 1 215 -1 7 858 702 214 14 7 chr17 35844427 35844568 -59428083 + B1_Mur1 SINE Alu 1 142 -7 7 858 954 88 7 0 chr17 35844572 35844709 -59427942 + B1_Mus1 SINE Alu 11 148 0 7 858 243 0 0 0 chr17 35844709 35844736 -59427915 + (A)n Simple_repeat Simple_repeat 1 27 0 7 858 320 86 0 17 chr17 35845601 35845660 -59426991 + Lx LINE L1 6585 6642 -12 7 858 230 312 52 41 chr17 35845672 35845769 -59426882 + ID_B1 SINE B4 1 98 -126 7 858 519 209 18 26 chr17 35845897 35846010 -59426641 + B1_Mur3 SINE Alu 5 116 -33 7 858 1003 149 23 0 chr17 35846011 35846185 -59426466 + B2_Mm2 SINE B2 2 179 -16 7 858 483 261 5 30 chr17 35847437 35847581 -59425070 - PB1D7 SINE Alu 0 147 11 7 858 264 288 25 90 chr17 35847489 35847611 -59425040 - MT2B2 LTR ERVL -329 255 142 7 858 331 253 10 40 chr17 35848312 35848411 -59424240 + B1_Mus1 SINE Alu 31 126 -22 7 858 529 172 0 2 chr17 35848568 35848681 -59423970 + B1_Mur2 SINE Alu 38 149 0 7 858 351 234 17 78 chr17 35849022 35849138 -59423513 - PB1D10 SINE Alu 0 117 9 7 858 303 305 8 45 chr17 35849382 35849516 -59423135 - L1ME1 LINE L1 -177 6002 5874 7 858 2495 71 3 0 chr17 35849736 35850062 -59422589 - ORR1A2 LTR MaLR 0 327 1 7 858 570 271 15 8 chr17 35850276 35850410 -59422241 - B1F SINE Alu -14 135 1 7 858 32 43 0 0 chr17 35850426 35850472 -59422179 + AT_rich Low_complexity Low_complexity 1 46 0 7 858 567 263 33 7 chr17 35850472 35850625 -59422026 - RSINE1 SINE B4 -4 161 5 7 858 312 293 3 0 chr17 35850791 35850889 -59421762 + B1F SINE Alu 1 100 -20 7 858 233 29 0 29 chr17 35850904 35850939 -59421712 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 858 1251 20 0 0 chr17 35850945 35851092 -59421559 + B1_Mm SINE Alu 1 147 0 7 858 201 108 0 0 chr17 35851092 35851129 -59421522 + (A)n Simple_repeat Simple_repeat 1 37 0 7 858 789 107 302 0 chr17 35851251 35851273 -59421378 - B2_Mm2 SINE B2 -1 194 164 7 858 216 0 0 0 chr17 35851273 35851297 -59421354 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 7 858 789 107 302 0 chr17 35851297 35851423 -59421228 - B2_Mm2 SINE B2 -32 163 2 7 858 1191 41 0 0 chr17 35851545 35851690 -59420961 + B1_Mus2 SINE Alu 1 145 -2 7 858 195 188 0 0 chr17 35851690 35851738 -59420913 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 7 858 382 195 118 31 chr17 35852113 35852240 -59420411 + B1F2 SINE Alu 3 140 -9 7 858 510 207 0 200 chr17 35852322 35852364 -59420287 + B3 SINE B2 2 36 -180 7 858 1101 55 7 0 chr17 35852364 35852509 -59420142 + B1_Mm SINE Alu 2 147 0 7 858 510 207 0 200 chr17 35852509 35852524 -59420127 + B3 SINE B2 37 37 -179 7 858 3294 18 15 5 chr17 35852524 35852914 -59419737 + MTA_Mm LTR MaLR 1 394 -2 7 858 580 235 0 9 chr17 35852914 35853030 -59419621 + B3A SINE B2 29 143 -55 7 858 417 303 15 36 chr17 35853056 35853193 -59419458 - ID_B1 SINE B4 -15 209 76 7 858 224 253 62 52 chr17 35853363 35853459 -59419192 + PB1D7 SINE Alu 19 115 -5 7 858 369 252 0 55 chr17 35853459 35853568 -59419083 - PB1D10 SINE Alu -5 112 10 7 858 240 301 90 76 chr17 35854404 35854432 -59418219 - ID_B1 SINE B4 -78 146 1 7 858 958 17 0 0 chr17 35854432 35854548 -59418103 - B2_Mm2 SINE B2 -79 116 1 7 858 928 75 116 24 chr17 35854731 35854895 -59417756 - B2_Mm1a SINE B2 -2 191 13 7 858 235 35 0 0 chr17 35854950 35854979 -59417672 + B2_Mm1t SINE B2 18 46 -147 7 858 260 111 0 0 chr17 35854959 35855004 -59417647 - B2_Mm1t SINE B2 -147 46 2 7 858 296 64 21 0 chr17 35855461 35855508 -59417143 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 7 858 681 250 7 0 chr17 35855521 35855669 -59416982 + RSINE1 SINE B4 3 151 -14 7 858 1276 91 11 5 chr17 35855704 35855891 -59416760 + B2_Mm1t SINE B2 1 188 -5 7 858 571 259 22 0 chr17 35856028 35856163 -59416488 + B1F2 SINE Alu 10 147 -2 7 858 441 281 102 0 chr17 35856181 35856309 -59416342 + ID_B1 SINE B4 82 222 -2 7 858 947 131 14 0 chr17 35856317 35856462 -59416189 + B1_Mur3 SINE Alu 3 149 0 7 858 1024 140 27 11 chr17 35857048 35857236 -59415415 - B2_Mm2 SINE B2 -4 191 1 7 858 305 292 0 114 chr17 35857959 35858125 -59414526 + B3A SINE B2 36 182 -16 7 858 435 256 59 8 chr17 35858154 35858272 -59414379 + PB1 SINE Alu 2 125 -2 7 858 638 240 78 105 chr17 35858295 35858514 -59414137 + ID_B1 SINE B4 12 224 0 7 858 418 157 19 93 chr17 35859249 35859369 -59413282 - B1F SINE Alu -8 112 1 8 858 441 191 10 21 chr17 35859482 35859578 -59413073 + PB1D7 SINE Alu 26 120 0 8 858 778 197 0 27 chr17 35859846 35859992 -59412659 + B3 SINE B2 1 142 -74 8 858 333 211 0 13 chr17 35859988 35860065 -59412586 - PB1D9 SINE Alu -39 81 6 8 858 436 165 28 37 chr17 35860267 35860374 -59412277 - ORR1A4 LTR MaLR -223 106 1 8 858 330 150 0 32 chr17 35860419 35860481 -59412170 + B1_Mur4 SINE Alu 1 60 -90 8 858 789 47 0 9 chr17 35860557 35860664 -59411987 + B1_Mus2 SINE Alu 42 147 0 8 858 654 181 9 0 chr17 35860678 35860794 -59411857 - B3A SINE B2 -80 118 2 8 858 723 220 6 12 chr17 35860825 35860986 -59411665 + B3 SINE B2 2 161 -55 8 858 1593 178 39 30 chr17 35861160 35861566 -59411085 + RMER17C LTR ERVK 1 410 0 8 858 752 152 68 0 chr17 35862195 35862327 -59410324 - B1_Mur4 SINE Alu -9 141 1 8 858 400 294 111 20 chr17 35863060 35863258 -59409393 + MER44A DNA MER2_type 1 216 -123 8 858 269 261 92 0 chr17 35863264 35863329 -59409322 + ID_B1 SINE B4 91 161 -63 8 858 23 0 0 0 chr17 35863337 35863360 -59409291 + AT_rich Low_complexity Low_complexity 1 23 0 8 858 355 266 28 114 chr17 35863364 35863534 -59409117 + B3A SINE B2 1 158 -37 8 858 716 218 98 39 chr17 35863568 35863719 -59408932 - RMER5 LTR ERV1 0 534 372 8 858 1238 193 97 17 chr17 35863719 35864079 -59408572 + RMER10A LTR ERVL 2 434 -8 8 858 1537 205 16 57 chr17 35864100 35864483 -59408168 - RMER5 LTR ERV1 -167 367 1 8 858 693 156 55 0 chr17 35865119 35865247 -59407404 + B1_Mus1 SINE Alu 1 135 -13 8 858 855 104 82 0 chr17 35865257 35865392 -59407259 - B1_Mm SINE Alu 0 147 2 8 858 282 164 0 0 chr17 35865414 35865469 -59407182 + GA-rich Low_complexity Low_complexity 3 57 0 8 858 476 172 58 4 chr17 35865497 35865617 -59407034 + B1_Mur2 SINE Alu 15 149 0 8 858 674 278 53 5 chr17 35865649 35865855 -59406796 + B3 SINE B2 1 216 0 8 858 273 155 0 17 chr17 35865918 35865988 -59406663 - B2_Mm1t SINE B2 -87 106 2 8 858 744 261 22 44 chr17 35866033 35866190 -59406461 + ID_B1 SINE B4 1 158 -66 8 858 3395 23 2 0 chr17 35866190 35866585 -59406066 + MTA_Mm LTR MaLR 1 396 0 8 858 744 261 22 44 chr17 35866585 35866655 -59405996 + ID_B1 SINE B4 159 223 -1 8 858 1534 57 0 0 chr17 35866729 35866922 -59405729 + B2_Mm1a SINE B2 1 193 0 8 858 3820 88 9 16 chr17 35867276 35867832 -59404819 + Lx LINE L1 6100 6651 -3 8 858 332 115 49 0 chr17 35867834 35867895 -59404756 + A-rich Low_complexity Low_complexity 2 65 0 8 858 210 37 0 0 chr17 35867971 35867998 -59404653 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 8 858 180 0 0 0 chr17 35868367 35868387 -59404264 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 8 858 295 290 46 18 chr17 35868429 35868538 -59404113 - PB1D9 SINE Alu -8 112 1 8 858 942 118 201 43 chr17 35868825 35869193 -59403458 + RMER6B LTR ERVK 1 426 -35 8 858 438 20 0 0 chr17 35869202 35869253 -59403398 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 858 249 109 0 0 chr17 35869253 35869299 -59403352 + (GA)n Simple_repeat Simple_repeat 1 46 0 8 858 848 166 7 14 chr17 35869301 35869448 -59403203 + RMER16 LTR ERVK 386 531 -2 8 858 450 36 0 0 chr17 35869448 35869504 -59403147 + (CA)n Simple_repeat Simple_repeat 1 56 0 8 858 573 233 148 23 chr17 35869786 35869962 -59402689 - B3 SINE B2 -10 206 9 8 858 307 277 29 29 chr17 35870215 35870319 -59402332 + B3 SINE B2 113 216 0 8 858 1118 189 5 0 chr17 35870482 35870683 -59401968 + B3 SINE B2 2 203 -13 8 858 459 0 0 0 chr17 35870699 35870750 -59401901 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 8 858 1133 73 0 0 chr17 35870750 35870901 -59401750 - B2_Mm2 SINE B2 -42 153 3 8 858 225 255 0 18 chr17 35870901 35870954 -59401697 - B4 SINE B4 -194 98 47 8 858 180 0 0 0 chr17 35871576 35871596 -59401055 + (CACCC)n Simple_repeat Simple_repeat 4 23 0 8 858 403 308 19 37 chr17 35871619 35871781 -59400870 + RLTR14 LTR ERV1 224 382 0 8 858 584 267 82 24 chr17 35871822 35872029 -59400622 - ID_B1 SINE B4 -5 219 1 8 858 1400 68 11 0 chr17 35872278 35872468 -59400183 + B2_Mm1t SINE B2 2 193 0 8 858 440 244 109 0 chr17 35872574 35872693 -59399958 + RSINE1 SINE B4 3 134 -31 8 858 1132 50 0 0 chr17 35872743 35872882 -59399769 + B1_Mus1 SINE Alu 2 140 -8 8 858 800 147 15 0 chr17 35873485 35873621 -59399030 + B1_Mur4 SINE Alu 1 138 -12 8 858 683 226 0 0 chr17 35874015 35874148 -59398503 + B3A SINE B2 6 138 -60 8 858 648 243 21 0 chr17 35874148 35874292 -59398359 - RSINE1 SINE B4 -17 148 2 8 858 258 271 200 40 chr17 35874318 35874418 -59398233 - B1_Mus1 SINE Alu -32 116 1 8 858 822 233 22 17 chr17 35874479 35874658 -59397993 - B3A SINE B2 -18 180 1 8 858 247 292 71 110 chr17 35875211 35875338 -59397313 + MT2B LTR ERVL 118 239 -362 8 858 484 220 28 0 chr17 35875264 35875373 -59397278 + PB1D9 SINE Alu 9 120 0 8 858 326 301 107 82 chr17 35875376 35875535 -59397116 + ID_B1 SINE B4 1 163 -61 8 858 994 160 98 15 chr17 35875536 35875739 -59396912 + URR1B DNA MER1_type 1 220 -5 8 858 494 265 26 12 chr17 35875792 35875974 -59396677 + B3A SINE B2 1 177 -39 8 858 198 301 40 27 chr17 35876809 35876884 -59395767 + L3 LINE CR1 3245 3320 -1169 8 858 1238 193 135 120 chr17 35876927 35877159 -59395492 - MTD LTR MaLR 0 419 210 8 858 1239 91 43 0 chr17 35877159 35877346 -59395305 - B2_Mm2 SINE B2 0 195 1 8 858 1238 193 135 120 chr17 35877346 35877514 -59395137 - MTD LTR MaLR -210 209 13 8 858 293 262 54 45 chr17 35877687 35877799 -59394852 - PB1D10 SINE Alu 0 117 5 8 858 528 213 48 167 chr17 35878053 35878239 -59394412 + MTE2a LTR MaLR 1 164 -215 8 858 701 191 26 33 chr17 35878380 35878532 -59394119 + MTE2a LTR MaLR 213 363 -16 8 858 288 0 0 0 chr17 35878744 35878776 -59393875 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 858 495 292 30 30 chr17 35878807 35878941 -59393710 - RSINE1 SINE B4 -29 136 3 8 858 435 309 109 52 chr17 35878941 35879158 -59393493 - B4A SINE B4 -62 230 1 8 858 1166 29 0 0 chr17 35879193 35879331 -59393320 + B1_Mus2 SINE Alu 1 138 -9 8 858 318 26 0 0 chr17 35879331 35879370 -59393281 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 8 858 300 111 0 0 chr17 35879848 35879902 -59392749 + (TC)n Simple_repeat Simple_repeat 1 54 0 8 858 282 56 0 0 chr17 35879902 35879938 -59392713 + (TG)n Simple_repeat Simple_repeat 1 36 0 8 858 204 125 0 0 chr17 35880180 35880212 -59392439 + (TCTCCC)n Simple_repeat Simple_repeat 3 34 0 8 858 359 265 63 102 chr17 35880230 35880272 -59392379 + B3A SINE B2 1 37 -161 8 858 1118 71 104 17 chr17 35880272 35880445 -59392206 - B2_Mm2 SINE B2 -7 188 1 8 858 359 265 63 102 chr17 35880445 35880608 -59392043 + B3A SINE B2 38 198 0 8 858 239 250 0 0 chr17 35880656 35880704 -59391947 - B1_Mur4 SINE Alu -101 49 2 8 858 252 0 0 0 chr17 35881709 35881737 -59390914 + (A)n Simple_repeat Simple_repeat 1 28 0 8 858 550 256 0 15 chr17 35882037 35882172 -59390479 - ID_B1 SINE B4 -1 223 91 8 858 180 0 0 0 chr17 35882534 35882554 -59390097 + (TTG)n Simple_repeat Simple_repeat 2 21 0 8 858 1229 82 0 6 chr17 35882567 35882738 -59389913 - B2_Mm2 SINE B2 -25 170 1 8 858 429 68 40 0 chr17 35882817 35882891 -59389760 + B2_Mm1t SINE B2 117 193 0 8 858 416 248 86 0 chr17 35883001 35883106 -59389545 + ID_B1 SINE B4 102 215 -9 8 858 1200 101 0 0 chr17 35883115 35883293 -59389358 + (GGA)n Simple_repeat Simple_repeat 1 178 0 8 858 659 273 32 0 chr17 35883307 35883461 -59389190 + B3 SINE B2 5 163 -53 8 858 830 144 25 79 chr17 35883485 35883647 -59389004 + B2_Mm2 SINE B2 1 161 -34 8 858 414 0 0 0 chr17 35883647 35883693 -59388958 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 8 858 830 144 25 79 chr17 35883693 35883733 -59388918 + B2_Mm2 SINE B2 162 192 -3 8 858 401 306 97 0 chr17 35883733 35883867 -59388784 + RSINE1 SINE B4 5 151 -14 8 858 1302 80 26 11 chr17 35884050 35884240 -59388411 + B2_Mm2 SINE B2 2 194 -1 8 858 612 179 0 0 chr17 35884240 35884357 -59388294 + GA-rich Low_complexity Low_complexity 1 117 0 8 858 360 0 0 0 chr17 35884358 35884398 -59388253 + (GGAA)n Simple_repeat Simple_repeat 1 40 0 8 858 1091 49 0 40 chr17 35884458 35884606 -59388045 + B1_Mus1 SINE Alu 2 143 -5 8 858 810 125 8 15 chr17 35884620 35884750 -59387901 + B1_Mus1 SINE Alu 20 148 0 8 858 1190 227 156 8 chr17 35885067 35885432 -59387219 - MTD LTR MaLR 0 419 1 8 858 411 21 0 0 chr17 35885439 35885487 -59387164 + (GA)n Simple_repeat Simple_repeat 2 49 0 8 858 275 330 19 19 chr17 35885570 35885675 -59386976 - PB1D7 SINE Alu -1 119 15 8 858 305 24 0 23 chr17 35885688 35885731 -59386920 + (TTTTTG)n Simple_repeat Simple_repeat 6 47 0 8 858 1135 68 7 0 chr17 35885731 35885877 -59386774 - B1_Mus1 SINE Alu 0 148 2 8 858 524 318 79 11 chr17 35886183 35886361 -59386290 - B3 SINE B2 -26 190 1 8 858 511 227 42 0 chr17 35886398 35886517 -59386134 + ID_B1 SINE B4 80 203 -21 8 858 2060 278 77 21 chr17 35887163 35887394 -59385257 + Lx8 LINE L1 6188 6423 -1050 8 858 288 70 0 0 chr17 35887394 35887437 -59385214 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 8 858 2060 279 161 18 chr17 35887437 35888019 -59384632 + Lx8 LINE L1 6424 7096 -377 8 858 281 229 32 32 chr17 35888320 35888383 -59384268 - RSINE1 SINE B4 -21 144 82 8 858 545 251 6 0 chr17 35888385 35888552 -59384099 + CT-rich Low_complexity Low_complexity 2 169 0 9 858 998 158 24 65 chr17 35888552 35888777 -59383874 + ORR1C1 LTR MaLR 1 241 -137 9 858 383 272 12 0 chr17 35888776 35888857 -59383794 + ID_B1 SINE B4 135 216 -8 9 858 1257 116 0 26 chr17 35888882 35889076 -59383575 + B2_Mm2 SINE B2 1 189 -6 9 858 243 297 12 86 chr17 35889100 35889181 -59383470 - B1F2 SINE Alu -74 75 1 9 858 206 136 23 0 chr17 35890056 35890100 -59382551 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 858 509 184 9 19 chr17 35890130 35890235 -59382416 - B4A SINE B4 -1 291 188 9 858 838 234 25 34 chr17 35890493 35890697 -59381954 - B3 SINE B2 -13 203 2 9 858 788 206 92 54 chr17 35890708 35890731 -59381920 + B3A SINE B2 2 24 -174 9 858 1962 132 11 69 chr17 35890731 35891080 -59381571 + ORR1A4 LTR MaLR 1 329 0 9 858 788 206 92 54 chr17 35891080 35891241 -59381410 + B3A SINE B2 25 193 -5 9 858 367 250 17 96 chr17 35891308 35891324 -59381327 + ID SINE ID 69 75 -149 9 858 440 269 0 37 chr17 35891324 35891432 -59381219 + B1F1 SINE Alu 2 105 -44 9 858 1464 44 55 0 chr17 35891519 35891702 -59380949 + B2_Mm1a SINE B2 1 193 0 9 858 1887 151 113 0 chr17 35892963 35893284 -59379367 + RMER15 LTR ERVL 1 359 -216 9 858 2726 153 76 2 chr17 35893284 35893770 -59378881 - RLTR28 LTR ERVL -2 522 1 9 858 1089 111 184 5 chr17 35893770 35893960 -59378691 + RMER15 LTR ERVL 352 575 0 9 858 422 281 143 24 chr17 35894379 35894547 -59378104 + B3A SINE B2 1 188 -10 9 858 1251 201 9 0 chr17 35894556 35894770 -59377881 + B3 SINE B2 1 216 0 9 858 875 170 7 0 chr17 35894779 35894926 -59377725 - B1_Mus1 SINE Alu 0 148 1 9 858 659 259 55 118 chr17 35895196 35895450 -59377201 + MTE2a LTR MaLR 1 238 -141 9 858 531 260 90 67 chr17 35895428 35895646 -59377005 + MTE2a LTR MaLR 159 376 -3 9 858 222 289 62 0 chr17 35895887 35895979 -59376672 - L2b LINE L2 -1 3425 3318 9 858 574 258 61 0 chr17 35896263 35896395 -59376256 - ID_B1 SINE B4 -5 219 80 9 858 689 233 78 20 chr17 35896435 35896588 -59376063 + ID_B1 SINE B4 32 193 -31 9 858 209 273 0 18 chr17 35896594 35896650 -59376001 + GA-rich Low_complexity Low_complexity 2 56 0 9 858 361 257 27 0 chr17 35897161 35897255 -59375396 - ID4_ SINE ID -55 97 2 9 858 21 0 0 0 chr17 35897271 35897292 -59375359 + AT_rich Low_complexity Low_complexity 1 21 0 9 858 398 321 9 9 chr17 35897320 35897433 -59375218 - RSINE1 SINE B4 -46 119 7 9 858 791 129 32 0 chr17 35897445 35897569 -59375082 + B1_Mur4 SINE Alu 16 143 -7 9 858 593 59 24 0 chr17 35897589 35897674 -59374977 + (TATG)n Simple_repeat Simple_repeat 4 90 0 9 858 546 297 101 0 chr17 35897677 35897815 -59374836 - B3A SINE B2 -46 152 1 9 858 291 54 0 0 chr17 35898096 35898133 -59374518 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 9 858 986 136 0 106 chr17 35898151 35898164 -59374487 + B2_Mm2 SINE B2 26 34 -161 9 858 1078 98 0 0 chr17 35898164 35898307 -59374344 + B1_Mus1 SINE Alu 2 144 -4 9 858 1061 92 6 26 chr17 35898307 35898453 -59374198 + B2_Mm1t SINE B2 35 179 -14 9 858 1265 48 0 0 chr17 35898453 35898599 -59374052 - B1_Mm SINE Alu 0 147 2 9 858 1061 120 2 256 chr17 35898599 35898627 -59374024 + B2_Mm1t SINE B2 170 194 -1 9 858 750 175 0 0 chr17 35898628 35898771 -59373880 + GA-rich Low_complexity Low_complexity 4 146 0 9 858 225 346 96 19 chr17 35898794 35898950 -59373701 + L1MC LINE L1 5447 5614 -2268 9 858 627 218 8 4 chr17 35898951 35899087 -59373564 + B1_Mur1 SINE Alu 8 140 -9 9 858 1512 153 136 19 chr17 35899105 35899472 -59373179 + RMER17C LTR ERVK 1 410 0 9 858 246 243 157 0 chr17 35899472 35899542 -59373109 + PB1 SINE Alu 12 92 -35 9 858 238 288 13 52 chr17 35900008 35900085 -59372566 + ID_B1 SINE B4 81 154 -70 9 858 402 242 11 11 chr17 35900030 35900122 -59372529 + PB1D7 SINE Alu 23 114 -6 9 858 677 283 27 45 chr17 35900123 35900345 -59372306 + ID_B1 SINE B4 1 218 -6 9 858 497 196 53 61 chr17 35900752 35900866 -59371785 + RSINE1 SINE B4 12 124 -41 9 858 405 0 0 0 chr17 35900866 35900911 -59371740 + (CA)n Simple_repeat Simple_repeat 2 46 0 9 858 570 214 0 43 chr17 35901272 35901389 -59371262 - PB1D9 SINE Alu 0 120 9 9 858 336 263 25 42 chr17 35901394 35901513 -59371138 - PB1D10 SINE Alu 0 117 1 9 858 1110 217 34 10 chr17 35901546 35901755 -59370896 + B3 SINE B2 3 216 0 9 858 554 343 78 55 chr17 35901830 35902289 -59370362 + RMER5 LTR ERV1 24 493 -41 9 858 301 333 130 30 chr17 35902321 35902590 -59370061 + Tigger12c DNA MER2_type 312 607 -127 9 858 260 299 148 11 chr17 35902855 35902943 -59369708 + ID_B1 SINE B4 92 191 -33 9 858 336 200 0 0 chr17 35902954 35903024 -59369627 + (CA)n Simple_repeat Simple_repeat 2 71 0 9 858 317 136 102 0 chr17 35903033 35903092 -59369559 + HAL1-3A_ME LINE L1 1975 2039 -819 9 858 636 221 25 57 chr17 35903694 35903706 -59368945 + B3A SINE B2 31 41 -157 9 858 781 229 14 0 chr17 35903706 35903850 -59368801 + B1_Mur2 SINE Alu 3 148 -1 9 858 789 193 41 8 chr17 35903850 35904025 -59368626 + B3 SINE B2 42 216 0 9 858 211 136 23 0 chr17 35904057 35904101 -59368550 + (TTTG)n Simple_repeat Simple_repeat 3 47 0 9 858 1232 61 0 7 chr17 35904101 35904249 -59368402 - B1_Mm SINE Alu 0 147 1 9 858 1261 115 21 21 chr17 35904253 35904440 -59368211 - B2_Mm2 SINE B2 -7 188 2 9 858 281 299 11 0 chr17 35904445 35904532 -59368119 + (CA)n Simple_repeat Simple_repeat 2 89 0 9 858 191 203 16 0 chr17 35904571 35904635 -59368016 + (CA)n Simple_repeat Simple_repeat 1 65 0 9 858 384 232 11 6 chr17 35904652 35904830 -59367821 + (CA)n Simple_repeat Simple_repeat 1 179 0 9 858 503 301 12 0 chr17 35904864 35905037 -59367614 + (CA)n Simple_repeat Simple_repeat 1 175 0 9 858 266 348 9 18 chr17 35904957 35905071 -59367580 + (CATA)n Simple_repeat Simple_repeat 1 113 0 9 858 287 242 258 13 chr17 35906106 35906211 -59366440 + PB1D10 SINE Alu 1 118 -30 9 858 593 259 35 14 chr17 35906210 35906355 -59366296 + RSINE1 SINE B4 18 165 0 9 858 1774 114 17 38 chr17 35906590 35906869 -59365782 + RLTR9B LTR ERVK 1 273 -164 9 858 741 62 0 0 chr17 35906869 35906965 -59365686 + BC1_Mm scRNA scRNA 1 96 -56 9 858 730 141 28 0 chr17 35906949 35907076 -59365575 + RLTR9B LTR ERVK 196 367 -70 9 858 1208 61 0 0 chr17 35907100 35907247 -59365404 - B1_Mus2 SINE Alu 0 147 1 9 858 432 231 0 21 chr17 35907247 35907329 -59365322 + RLTR9B LTR ERVK 350 430 -7 9 858 789 263 23 37 chr17 35908067 35908284 -59364367 + B4A SINE B4 3 216 -76 9 858 643 177 31 31 chr17 35908505 35908633 -59364018 - B1_Mur1 SINE Alu -1 148 21 9 858 238 255 9 133 chr17 35908547 35908660 -59363991 - MT2B LTR ERVL -344 257 159 9 858 510 322 0 38 chr17 35908745 35908903 -59363748 + RSINE1 SINE B4 14 165 0 9 858 195 100 0 0 chr17 35908910 35908940 -59363711 + (CA)n Simple_repeat Simple_repeat 2 31 0 9 858 317 257 0 28 chr17 35908940 35909012 -59363639 - B4A SINE B4 -137 155 86 9 858 304 293 0 12 chr17 35909506 35909589 -59363062 + ID4_ SINE ID 1 82 -1 9 858 2191 104 3 59 chr17 35909597 35909935 -59362716 + ORR1A2 LTR MaLR 1 319 -8 9 858 821 207 7 0 chr17 35909932 35910077 -59362574 + ID_B1 SINE B4 79 224 0 9 858 544 232 0 0 chr17 35910279 35910374 -59362277 + B1F1 SINE Alu 11 105 -44 9 858 390 228 154 26 chr17 35910372 35910489 -59362162 + B3 SINE B2 81 212 -4 9 858 343 159 22 11 chr17 35910489 35910537 -59362114 + polypurine Low_complexity Low_complexity 4 53 0 9 858 1273 48 0 0 chr17 35910537 35910684 -59361967 + B1_Mm SINE Alu 1 147 0 9 858 343 159 22 11 chr17 35910684 35910724 -59361927 + polypurine Low_complexity Low_complexity 54 93 0 9 858 678 234 14 7 chr17 35910766 35910908 -59361743 - ID_B1 SINE B4 0 224 82 9 858 366 239 11 22 chr17 35910935 35911025 -59361626 + PB1D10 SINE Alu 1 89 -28 9 858 328 283 144 79 chr17 35911050 35911265 -59361386 + L1M4 LINE L1 5504 5732 -442 9 858 837 246 151 16 chr17 35911271 35911523 -59361128 - MTEb LTR MaLR -92 287 2 9 858 470 250 0 0 chr17 35911739 35911831 -59360820 - B1F1 SINE Alu -57 92 1 9 858 331 246 0 28 chr17 35911771 35911842 -59360809 - ID_B1 SINE B4 -83 141 73 9 858 664 240 71 60 chr17 35911961 35912143 -59360508 + B3A SINE B2 15 198 0 9 858 1139 53 0 0 chr17 35912161 35912294 -59360357 + B1_Mus1 SINE Alu 1 133 -15 9 858 1008 66 189 7 chr17 35912454 35912607 -59360044 + B2_Mm2 SINE B2 1 181 -14 9 858 1224 34 14 0 chr17 35912608 35912754 -59359897 - B1_Mus1 SINE Alu 0 148 1 9 858 489 246 96 27 chr17 35912788 35912934 -59359717 + B3 SINE B2 58 213 -3 9 858 443 295 0 0 chr17 35913125 35913220 -59359431 + PB1D7 SINE Alu 20 114 -6 9 858 378 0 0 0 chr17 35913221 35913263 -59359388 + (TAA)n Simple_repeat Simple_repeat 1 42 0 9 859 223 336 81 0 chr17 35914142 35914274 -59358377 + MIRc SINE MIR 25 173 -95 9 859 1142 284 15 26 chr17 35914593 35914864 -59357787 + B4A SINE B4 2 269 -23 9 859 1576 132 55 8 chr17 35914904 35915389 -59357262 - RMER4B LTR ERVK -12 573 5 9 859 288 0 0 0 chr17 35915389 35915421 -59357230 + (CA)n Simple_repeat Simple_repeat 1 32 0 9 859 435 176 0 0 chr17 35915440 35915508 -59357143 + PB1D9 SINE Alu 2 69 -51 9 859 622 202 0 17 chr17 35915718 35915834 -59356817 + PB1D10 SINE Alu 3 116 -1 9 859 294 240 278 37 chr17 35915834 35915942 -59356709 + ID_B1 SINE B4 75 208 -16 9 859 232 304 0 0 chr17 35915943 35916012 -59356639 + GA-rich Low_complexity Low_complexity 5 73 0 9 859 442 209 45 129 chr17 35916735 35916867 -59355784 - B1F SINE Alu 0 149 29 9 859 305 152 212 0 chr17 35917203 35917269 -59355382 + PB1D10 SINE Alu 28 107 -10 9 859 471 253 4 25 chr17 35917298 35917413 -59355238 + PB1D9 SINE Alu 25 133 -17 1 859 227 226 16 0 chr17 35917683 35917745 -59354906 + L1MC LINE L1 5264 5326 -820 1 859 629 260 44 72 chr17 35917942 35918189 -59354462 + MT2A LTR ERVL 6 238 -363 1 859 1317 91 11 0 chr17 35918189 35918365 -59354286 - B2_Mm1t SINE B2 -14 179 2 1 859 598 211 119 88 chr17 35918365 35918559 -59354092 + MT2A LTR ERVL 108 438 -163 1 859 1303 255 41 22 chr17 35918573 35918942 -59353709 - Lx5 LINE L1 -17 7033 6658 1 859 582 203 93 7 chr17 35918942 35919081 -59353570 + MT2A LTR ERVL 375 525 -8 1 859 593 286 14 0 chr17 35919170 35919310 -59353341 + B1F2 SINE Alu 1 142 -7 1 859 261 75 0 0 chr17 35919310 35919350 -59353301 + (CATA)n Simple_repeat Simple_repeat 2 41 0 1 859 333 257 29 0 chr17 35919353 35919423 -59353228 + ID4 SINE ID 12 83 0 1 859 630 251 4 10 chr17 35919432 35919582 -59353069 + B3A SINE B2 2 143 -50 1 859 658 252 29 88 chr17 35919612 35919765 -59352886 + RSINE1 SINE B4 3 150 -15 1 859 542 100 0 22 chr17 35919765 35919857 -59352794 + (CATA)n Simple_repeat Simple_repeat 4 93 0 1 859 658 252 29 88 chr17 35919857 35919873 -59352778 + RSINE1 SINE B4 151 162 -3 1 859 425 297 0 8 chr17 35920223 35920342 -59352309 - PB1D7 SINE Alu -2 118 1 1 859 639 193 17 9 chr17 35920373 35920488 -59352163 - PB1D9 SINE Alu 0 120 5 1 859 327 281 106 59 chr17 35920609 35920869 -59351782 + MTEa LTR MaLR 73 349 -30 1 859 337 261 40 101 chr17 35921132 35921281 -59351370 - B1F1 SINE Alu -9 140 1 1 859 282 286 23 23 chr17 35921350 35921436 -59351215 + PB1D10 SINE Alu 31 116 -1 1 859 369 240 5 32 chr17 35921456 35921641 -59351010 + GA-rich Low_complexity Low_complexity 1 180 0 1 859 185 178 55 18 chr17 35921703 35921812 -59350839 + GA-rich Low_complexity Low_complexity 5 117 0 1 859 248 244 11 0 chr17 35921828 35921918 -59350733 + GA-rich Low_complexity Low_complexity 2 92 0 1 859 1475 83 5 0 chr17 35922448 35922640 -59350011 - B2_Mm1a SINE B2 0 193 1 1 859 438 20 0 0 chr17 35922715 35922766 -59349885 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 859 331 342 18 0 chr17 35922813 35922927 -59349724 - B4A SINE B4 -16 276 161 1 859 2336 87 12 36 chr17 35922927 35923262 -59349389 + ORR1A2 LTR MaLR 1 327 0 1 859 391 217 12 0 chr17 35923298 35923381 -59349270 - B4A SINE B4 -200 92 9 1 859 346 224 170 0 chr17 35923397 35923488 -59349163 - PB1D10 SINE Alu -1 116 14 1 859 1660 26 0 25 chr17 35923748 35923944 -59348707 + B2_Mm1t SINE B2 1 191 -2 1 859 388 222 67 0 chr17 35924082 35924172 -59348479 - MER21B LTR ERV1 -138 725 630 1 859 1148 68 0 20 chr17 35924238 35924387 -59348264 - B1_Mus1 SINE Alu -2 146 1 1 859 463 278 80 139 chr17 35924416 35924499 -59348152 - ID_B1 SINE B4 0 224 156 1 859 538 258 88 69 chr17 35924499 35924703 -59347948 - B3 SINE B2 -4 212 5 1 859 463 278 80 139 chr17 35924703 35924857 -59347794 - ID_B1 SINE B4 -69 155 1 1 859 1172 57 0 0 chr17 35924936 35925076 -59347575 + B1_Mus2 SINE Alu 1 140 -7 1 859 360 0 0 0 chr17 35925077 35925117 -59347534 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 859 1155 101 0 0 chr17 35925454 35925612 -59347039 + RMER6A LTR ERVK 57 214 -542 1 859 1158 102 45 6 chr17 35925612 35925789 -59346862 + B2_Mm1t SINE B2 1 184 -9 1 859 259 179 45 0 chr17 35925789 35925856 -59346795 - MTC-int LTR MaLR -94 1164 1095 1 859 734 157 86 38 chr17 35925856 35926036 -59346615 + B3 SINE B2 10 188 -7 1 859 1209 41 14 0 chr17 35926045 35926190 -59346461 + B1_Mus2 SINE Alu 1 147 0 1 859 596 130 8 31 chr17 35926190 35926317 -59346334 + GA-rich Low_complexity Low_complexity 1 124 0 1 859 3206 216 55 83 chr17 35926327 35927277 -59345374 - MTC-int LTR MaLR -173 925 3 1 859 2087 141 97 3 chr17 35927292 35927654 -59344997 - MTC LTR MaLR -25 396 1 1 859 450 372 134 10 chr17 35927677 35927878 -59344773 - MER21B LTR ERV1 -284 579 354 1 859 722 216 0 26 chr17 35927906 35928058 -59344593 - B1F2 SINE Alu -1 148 1 1 859 571 258 7 29 chr17 35928141 35928277 -59344374 + B3 SINE B2 84 216 0 1 859 212 200 0 0 chr17 35928323 35928358 -59344293 + ID SINE ID 3 37 -187 1 859 207 203 0 0 chr17 35928433 35928492 -59344159 + GA-rich Low_complexity Low_complexity 3 61 0 1 859 477 221 21 0 chr17 35928492 35928587 -59344064 + ID_B1 SINE B4 121 217 -7 1 859 1167 88 0 0 chr17 35928622 35928769 -59343882 + B1_Mus1 SINE Alu 2 148 0 1 859 186 133 0 0 chr17 35928770 35928800 -59343851 + (A)n Simple_repeat Simple_repeat 1 30 0 1 859 1505 164 84 3 chr17 35928802 35929089 -59343562 + Lx5 LINE L1 6741 7050 0 1 859 300 169 310 0 chr17 35929108 35929179 -59343472 - B3 SINE B2 -123 93 1 1 859 555 121 36 0 chr17 35929449 35929532 -59343119 + PB1D9 SINE Alu 34 119 -1 1 859 207 108 27 0 chr17 35929533 35929570 -59343081 + (CAAAAA)n Simple_repeat Simple_repeat 6 43 0 1 859 742 232 108 5 chr17 35929678 35929873 -59342778 - ID_B1 SINE B4 -9 215 1 1 859 638 252 0 0 chr17 35930312 35930435 -59342216 - RSINE1 SINE B4 -40 125 3 1 859 784 249 5 87 chr17 35930671 35930878 -59341773 + B3A SINE B2 3 192 -6 1 859 252 318 86 72 chr17 35930951 35931090 -59341561 + L2c LINE L2 3243 3383 -4 1 859 360 347 16 102 chr17 35931100 35931120 -59341531 - B3A SINE B2 -20 178 160 1 859 237 33 0 0 chr17 35931120 35931150 -59341501 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 859 360 347 16 102 chr17 35931150 35931283 -59341368 - B3A SINE B2 -39 159 36 1 859 1682 31 0 0 chr17 35931283 35931476 -59341175 - B2_Mm1a SINE B2 0 193 1 1 859 360 347 16 102 chr17 35931476 35931507 -59341144 - B3A SINE B2 -163 35 9 1 859 767 205 31 25 chr17 35931535 35931695 -59340956 - B3 SINE B2 -1 215 55 1 859 584 78 0 0 chr17 35931680 35931757 -59340894 - B1_Mus2 SINE Alu -70 77 1 1 859 780 236 7 20 chr17 35931757 35931907 -59340744 - ID_B1 SINE B4 -74 150 3 1 859 283 350 29 0 chr17 35932047 35932122 -59340529 + PB1D10 SINE Alu 2 77 -40 1 859 261 0 0 0 chr17 35932122 35932151 -59340500 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 859 283 350 29 0 chr17 35932151 35932178 -59340473 + PB1D10 SINE Alu 78 105 -12 1 859 296 247 123 0 chr17 35932449 35932530 -59340121 + PB1D9 SINE Alu 30 120 0 1 859 563 243 0 0 chr17 35933029 35933136 -59339515 + B1F SINE Alu 3 109 -40 1 859 1385 57 0 33 chr17 35933161 35933343 -59339308 + B2_Mm2 SINE B2 2 177 -18 1 859 525 293 154 6 chr17 35933579 35933761 -59338890 + RMER15 LTR ERVL 347 555 -20 1 859 189 171 0 0 chr17 35933790 35933825 -59338826 + (TAA)n Simple_repeat Simple_repeat 3 37 0 1 859 1748 16 0 0 chr17 35934524 35934717 -59337934 + B2_Mm1t SINE B2 1 193 0 1 859 1283 27 0 0 chr17 35934732 35934878 -59337773 + B1_Mus2 SINE Alu 2 147 0 1 859 468 35 0 0 chr17 35934927 35934985 -59337666 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 859 306 0 0 0 chr17 35934990 35935024 -59337627 + (TAGA)n Simple_repeat Simple_repeat 1 34 0 1 859 2264 96 9 22 chr17 35935024 35935344 -59337307 + ORR1A3 LTR MaLR 4 319 -7 1 859 880 235 49 0 chr17 35935388 35935592 -59337059 + B3 SINE B2 3 216 0 1 859 1755 247 211 15 chr17 35935931 35936519 -59336132 + MER44D DNA MER2_type 3 705 0 1 859 255 205 244 0 chr17 35936519 35936595 -59336056 + MLT1G3 LTR MaLR 13 107 -488 1 859 875 43 0 17 chr17 35936776 35936871 -59335780 + (GAA)n Simple_repeat Simple_repeat 1 95 0 1 859 1602 0 0 0 chr17 35936871 35937049 -59335602 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 1 859 875 43 0 17 chr17 35937049 35937070 -59335581 + (GAA)n Simple_repeat Simple_repeat 3 22 0 1 859 307 220 34 0 chr17 35937111 35937170 -59335481 + B1F2 SINE Alu 40 100 -49 1 859 468 0 0 0 chr17 35937171 35937223 -59335428 + (TAA)n Simple_repeat Simple_repeat 2 53 0 1 859 618 185 30 37 chr17 35937348 35937483 -59335168 + B1_Mur2 SINE Alu 14 147 -2 1 859 410 203 14 0 chr17 35937486 35937560 -59335091 + ID_B1 SINE B4 147 221 -3 1 859 572 261 32 64 chr17 35937704 35937892 -59334759 + B3A SINE B2 1 182 -16 1 859 31 0 0 0 chr17 35937905 35937936 -59334715 + AT_rich Low_complexity Low_complexity 1 31 0 1 859 317 246 29 0 chr17 35937966 35938035 -59334616 + ID4 SINE ID 5 75 -8 1 859 375 273 51 36 chr17 35938328 35938465 -59334186 + MLT1G3 LTR MaLR 446 584 -11 1 859 440 241 44 9 chr17 35938527 35938640 -59334011 + B1F SINE Alu 24 140 -9 1 859 418 241 16 79 chr17 35938640 35938653 -59333998 + ID_B1 SINE B4 105 222 -2 1 859 832 156 152 26 chr17 35938654 35938845 -59333806 + B3 SINE B2 2 216 0 1 859 234 309 24 12 chr17 35939660 35939742 -59332909 + LTR16A1 LTR ERVL 374 456 0 1 859 1241 61 0 0 chr17 35940445 35940592 -59332059 + B1_Mus1 SINE Alu 2 148 0 1 859 2829 174 42 0 chr17 35940685 35941180 -59331471 - RMER20A LTR ERVK 0 516 1 1 859 448 336 88 0 chr17 35941500 35941637 -59331014 + RSINE1 SINE B4 11 159 -6 1 859 729 269 6 60 chr17 35941655 35941837 -59330814 + B3 SINE B2 7 178 -38 1 859 1096 59 15 0 chr17 35941838 35941974 -59330677 + B1_Mus2 SINE Alu 2 139 -8 1 859 1320 14 0 0 chr17 35941985 35942132 -59330519 + B1_Mm SINE Alu 1 147 0 1 859 255 61 0 0 chr17 35942145 35942178 -59330473 + (A)n Simple_repeat Simple_repeat 1 33 0 1 859 32 26 0 0 chr17 35942211 35942250 -59330401 + AT_rich Low_complexity Low_complexity 1 39 0 1 859 821 244 27 67 chr17 35942491 35942715 -59329936 + B3 SINE B2 2 216 0 1 859 762 196 28 0 chr17 35942720 35942863 -59329788 + B1_Mur4 SINE Alu 4 150 0 1 859 715 108 0 10 chr17 35942873 35942976 -59329675 + B1_Mm SINE Alu 40 141 -6 1 859 294 29 0 0 chr17 35942978 35943013 -59329638 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 1 859 366 180 75 43 chr17 35943138 35943225 -59329426 + PB1D10 SINE Alu 19 109 -8 1 859 495 0 0 0 chr17 35943225 35943280 -59329371 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 1 859 597 279 62 0 chr17 35943285 35943464 -59329187 + B3A SINE B2 4 193 -5 1 859 842 189 0 51 chr17 35943475 35943631 -59329020 + B1_Mur4 SINE Alu 3 150 0 1 859 29 0 0 0 chr17 35943634 35943663 -59328988 + AT_rich Low_complexity Low_complexity 1 29 0 1 859 427 186 76 29 chr17 35943663 35943768 -59328883 + PB1D10 SINE Alu 5 114 -3 1 859 390 298 11 1 chr17 35943816 35943926 -59328725 - PB1D10 SINE Alu 0 117 8 1 859 454 225 61 26 chr17 35943934 35944048 -59328603 - PB1D7 SINE Alu -2 118 1 1 859 477 220 0 0 chr17 35944155 35944246 -59328405 + B1F SINE Alu 51 141 -8 1 859 788 264 0 40 chr17 35944262 35944463 -59328188 + B3A SINE B2 5 197 -1 1 859 1190 184 24 0 chr17 35944507 35944714 -59327937 - B3 SINE B2 -4 212 1 1 859 603 163 143 33 chr17 35944733 35944867 -59327784 + B1_Mur2 SINE Alu 3 150 0 1 859 357 267 109 64 chr17 35944759 35944915 -59327736 + B4A SINE B4 113 275 -17 1 859 289 328 33 49 chr17 35944896 35945018 -59327633 + B4 SINE B4 104 223 -69 1 859 454 253 10 10 chr17 35945752 35945861 -59326790 - B1F SINE Alu -11 109 1 1 859 1175 81 0 0 chr17 35945975 35946123 -59326528 - B1_Mus1 SINE Alu 0 148 1 1 859 473 299 8 67 chr17 35946197 35946217 -59326434 - ID_B1 SINE B4 -46 246 166 1 859 728 203 0 29 chr17 35946217 35946354 -59326297 - B1_Mur1 SINE Alu -1 148 16 1 859 473 299 8 67 chr17 35946354 35946373 -59326278 - ID_B1 SINE B4 -46 165 77 1 859 324 266 0 0 chr17 35946883 35946962 -59325689 + MER3 DNA MER1_type 19 97 -112 1 859 247 323 139 19 chr17 35946975 35946997 -59325654 - ID_B1 SINE B4 -2 222 174 1 859 289 247 37 12 chr17 35946997 35947079 -59325572 - PB1D10 SINE Alu -1 116 33 1 859 247 323 139 19 chr17 35947079 35947133 -59325518 - ID_B1 SINE B4 -2 173 46 1 859 1486 88 0 5 chr17 35947686 35947881 -59324770 + B2_Mm2 SINE B2 1 194 -1 1 859 220 183 177 32 chr17 35948265 35948327 -59324324 + PB1D7 SINE Alu 43 113 -7 1 859 240 282 13 0 chr17 35948386 35948464 -59324187 + ID2 SINE ID 4 82 -1 1 859 712 218 102 20 chr17 35948487 35948684 -59323967 + B3 SINE B2 4 216 0 1 859 1143 211 0 23 chr17 35948695 35948858 -59323793 + B3 SINE B2 1 162 -54 1 859 576 29 0 0 chr17 35948858 35948928 -59323723 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 859 1143 211 0 23 chr17 35948928 35948982 -59323669 + B3 SINE B2 163 213 -3 1 859 557 219 160 0 chr17 35948999 35949118 -59323533 + B3 SINE B2 2 139 -77 1 859 916 195 128 5 chr17 35949112 35949323 -59323328 + RMER16 LTR ERVK 297 533 0 1 859 1140 150 25 15 chr17 35949323 35949525 -59323126 - RLTR11A2 LTR ERVK -321 206 3 1 859 238 267 33 0 chr17 35949693 35949753 -59322898 - tRNA-Glu-GAA tRNA tRNA -12 63 2 1 859 308 219 16 0 chr17 35950758 35950822 -59321829 + ID SINE ID 2 66 -158 1 859 396 214 350 0 chr17 35950886 35951026 -59321625 + ID_B1 SINE B4 24 212 -12 1 859 387 0 0 0 chr17 35951076 35951119 -59321532 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 859 560 301 6 76 chr17 35951121 35951279 -59321372 - RSINE1 SINE B4 -15 150 4 1 859 248 0 31 0 chr17 35951293 35951325 -59321326 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 859 956 55 0 59 chr17 35951331 35951466 -59321185 + B1_Mus1 SINE Alu 22 148 0 1 859 297 109 0 0 chr17 35951466 35951512 -59321139 + (A)n Simple_repeat Simple_repeat 1 46 0 1 859 201 94 0 0 chr17 35952204 35952236 -59320415 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 1 859 624 232 14 34 chr17 35952301 35952448 -59320203 - B1_Mur2 SINE Alu 0 149 6 1 859 295 310 13 101 chr17 35952306 35952464 -59320187 - ID_B1 SINE B4 0 224 81 1 859 663 212 97 82 chr17 35952483 35952678 -59319973 - B3A SINE B2 0 198 1 1 859 288 221 143 9 chr17 35953441 35953546 -59319105 + B3 SINE B2 73 191 -25 1 859 334 254 0 0 chr17 35953717 35953784 -59318867 + tRNA-Ala-GCY_ tRNA tRNA 2 68 -7 1 859 328 312 18 14 chr17 35953784 35953825 -59318826 + ID4_ SINE ID 8 110 -42 1 859 271 328 4 24 chr17 35953866 35954025 -59318626 + G-rich Low_complexity Low_complexity 1 155 0 1 859 608 171 38 0 chr17 35954847 35954952 -59317699 + RSINE1 SINE B4 21 129 -36 1 859 955 110 7 46 chr17 35955001 35955153 -59317498 + B1_Mur4 SINE Alu 5 150 0 1 859 202 0 59 29 chr17 35955156 35955190 -59317461 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1 859 272 234 61 30 chr17 35955201 35955267 -59317384 + ID4_ SINE ID 2 69 -14 1 859 677 237 17 138 chr17 35955316 35955421 -59317230 - B3 SINE B2 -5 211 122 1 859 1296 41 0 0 chr17 35955421 35955568 -59317083 + B1_Mus2 SINE Alu 1 147 0 1 859 677 237 17 138 chr17 35955568 35955702 -59316949 - B3 SINE B2 -95 121 1 1 859 1651 31 0 20 chr17 35955833 35956029 -59316622 - B2_Mm1a SINE B2 0 193 2 1 859 722 282 17 6 chr17 35956068 35956246 -59316405 + B3A SINE B2 1 180 -18 1 859 360 0 0 0 chr17 35956249 35956289 -59316362 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 859 201 241 0 65 chr17 35956302 35956364 -59316287 - L2b LINE L2 -23 3352 3295 1 859 216 97 0 0 chr17 35956860 35956891 -59315760 + (T)n Simple_repeat Simple_repeat 1 31 0 1 859 537 271 34 8 chr17 35957172 35957291 -59315360 - RSINE1 SINE B4 -3 162 41 1 859 1219 68 0 0 chr17 35957363 35957509 -59315142 - B1_Mus2 SINE Alu 0 147 2 1 859 761 249 66 47 chr17 35957517 35957728 -59314923 - B3 SINE B2 -1 215 1 1 859 189 0 0 0 chr17 35960962 35960983 -59311668 + (CCCCCA)n Simple_repeat Simple_repeat 3 23 0 1 859 490 240 0 151 chr17 35961914 35962086 -59310565 + B1F SINE Alu 1 146 -3 1 859 723 190 44 0 chr17 35962086 35962222 -59310429 + B1_Mur3 SINE Alu 1 143 -6 1 859 1380 74 0 45 chr17 35962940 35963138 -59309513 - B2_Mm2 SINE B2 -6 189 1 1 859 287 49 24 0 chr17 35963268 35963309 -59309342 + (CAGA)n Simple_repeat Simple_repeat 2 43 0 1 859 381 249 502 0 chr17 35963320 35963460 -59309191 + B4 SINE B4 1 210 -82 1 859 207 167 0 0 chr17 35963512 35963554 -59309097 + (CAGA)n Simple_repeat Simple_repeat 2 43 0 1 859 213 426 77 14 chr17 35963578 35963721 -59308930 + MER91A DNA Tip100 23 174 -22 1 859 276 53 0 0 chr17 35964044 35964082 -59308569 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 859 481 286 53 21 chr17 35964082 35964271 -59308380 - MER82 DNA MER2_type -281 372 178 1 859 751 196 36 0 chr17 35964306 35964444 -59308207 - B1_Mur1 SINE Alu -6 143 1 1 859 420 37 0 0 chr17 35964528 35964582 -59308069 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 859 396 329 77 14 chr17 35964595 35964802 -59307849 - MER82 DNA MER2_type -307 346 127 1 859 381 186 14 14 chr17 35964799 35964870 -59307781 - B1_Mus2 SINE Alu -58 89 19 1 859 422 261 24 73 chr17 35964847 35965012 -59307639 + B4A SINE B4 68 224 -68 1 859 965 121 7 14 chr17 35964873 35965016 -59307635 + B1_Mur3 SINE Alu 7 148 -1 1 859 1280 154 0 65 chr17 35965025 35965254 -59307397 - B3 SINE B2 0 216 3 1 859 543 214 33 33 chr17 35965283 35965404 -59307247 - RSINE1 SINE B4 -33 132 12 1 859 180 0 0 0 chr17 35965449 35965469 -59307182 + (T)n Simple_repeat Simple_repeat 1 20 0 1 859 1156 95 0 0 chr17 35965469 35965617 -59307034 - B1_Mus1 SINE Alu 0 148 1 1 859 631 193 99 60 chr17 35965680 35965862 -59306789 + B2_Mm2 SINE B2 3 191 -4 1 859 554 198 138 16 chr17 35965881 35966004 -59306647 + B1_Mus2 SINE Alu 10 147 0 1 859 201 39 0 0 chr17 35966243 35966269 -59306382 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 859 1077 73 7 0 chr17 35966269 35966405 -59306246 - B1_Mm SINE Alu -9 138 2 1 859 404 311 17 72 chr17 35967155 35967180 -59305471 - ID_B1 SINE B4 -41 251 177 1 859 690 219 8 8 chr17 35967180 35967309 -59305342 - B1_Mur1 SINE Alu 0 149 21 1 859 404 311 17 72 chr17 35967309 35967342 -59305309 - ID_B1 SINE B4 -41 176 69 1 859 361 129 0 28 chr17 35967344 35967416 -59305235 + CT-rich Low_complexity Low_complexity 1 70 0 1 859 253 259 52 0 chr17 35967482 35967540 -59305111 - RSINE1 SINE B4 -103 62 2 1 859 424 226 109 36 chr17 35968188 35968298 -59304353 + B4 SINE B4 175 292 0 1 859 1214 35 28 0 chr17 35968498 35968641 -59304010 - B1_Mus1 SINE Alu 0 148 2 1 859 749 154 96 0 chr17 35968656 35968792 -59303859 + B1_Mur3 SINE Alu 1 149 0 1 859 422 182 26 0 chr17 35968928 35969005 -59303646 + PB1D9 SINE Alu 23 101 -19 1 859 590 161 44 18 chr17 35969009 35969123 -59303528 - B1_Mur4 SINE Alu 0 150 34 1 859 229 186 200 17 chr17 35969310 35969370 -59303281 - B1_Mur2 SINE Alu -44 105 35 1 859 230 247 141 13 chr17 35969805 35969883 -59302768 + PB1D10 SINE Alu 18 105 -12 1 859 2519 80 87 14 chr17 35970411 35970780 -59301871 + MTA_Mm LTR MaLR 1 396 0 1 859 734 123 205 0 chr17 35971527 35971649 -59301002 + B1_Mus1 SINE Alu 2 148 0 1 859 198 0 0 0 chr17 35971649 35971671 -59300980 + (A)n Simple_repeat Simple_repeat 1 22 0 1 859 329 182 76 25 chr17 35971756 35971835 -59300816 - L2a LINE L2 -12 3414 3332 1 859 334 226 95 0 chr17 35973421 35973505 -59299146 + PB1D9 SINE Alu 1 92 -28 1 859 2919 54 64 8 chr17 35975885 35976260 -59296391 + MTA_Mm LTR MaLR 1 396 0 1 859 232 328 54 31 chr17 35976614 35976743 -59295908 + ID_B1 SINE B4 93 224 0 1 859 251 345 63 9 chr17 35976759 35976870 -59295781 + PB1 SINE Alu 11 127 0 1 859 376 204 48 14 chr17 35976875 35976997 -59295654 + B3 SINE B2 1 206 -10 1 859 381 221 30 59 chr17 35977119 35977220 -59295431 + B1F2 SINE Alu 47 144 -5 1 859 1247 48 7 0 chr17 35977281 35977428 -59295223 + B1_Mus1 SINE Alu 1 148 0 1 859 180 0 0 0 chr17 35977434 35977454 -59295197 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 859 26 30 0 0 chr17 35977692 35977725 -59294926 + AT_rich Low_complexity Low_complexity 1 33 0 1 859 1277 34 0 0 chr17 35977834 35977980 -59294671 + B1_Mm SINE Alu 2 147 0 1 859 1080 56 0 34 chr17 35979203 35979351 -59293300 + B1_Mus2 SINE Alu 4 146 -1 1 859 224 345 41 24 chr17 35979424 35979593 -59293058 + MIR SINE MIR 85 256 -6 1 859 728 135 27 0 chr17 35979878 35979989 -59292662 - B2_Mm2 SINE B2 -81 114 1 1 859 650 261 14 0 chr17 35980042 35980180 -59292471 - B3 SINE B2 -66 150 11 1 859 387 312 16 16 chr17 35980193 35980320 -59292331 - PB1 SINE Alu 0 127 1 1 859 234 320 26 0 chr17 35980360 35980438 -59292213 + ID4 SINE ID 2 81 -2 1 859 1280 100 38 16 chr17 35980565 35980748 -59291903 - B2_Mm2 SINE B2 -8 187 1 1 859 383 278 92 8 chr17 35980765 35980886 -59291765 - B1_Mus2 SINE Alu -8 141 3 1 859 1296 27 0 0 chr17 35980912 35981059 -59291592 - B1_Mus2 SINE Alu 0 147 1 1 859 228 346 12 0 chr17 35981148 35981229 -59291422 - ID4_ SINE ID -1 82 1 1 859 537 130 0 0 chr17 35981278 35981355 -59291296 + B1_Mus1 SINE Alu 11 87 -61 1 859 476 245 0 7 chr17 35981596 35981740 -59290911 + (TA)n Simple_repeat Simple_repeat 2 144 0 1 859 819 238 63 0 chr17 35981887 35982076 -59290575 + B3 SINE B2 1 201 -15 1 859 709 211 41 34 chr17 35982188 35982335 -59290316 - B1_Mur2 SINE Alu 0 149 2 1 859 427 288 98 0 chr17 35982373 35982505 -59290146 + B1F SINE Alu 5 149 0 1 859 260 323 0 0 chr17 35982508 35982573 -59290078 + ID4_ SINE ID 8 72 -11 1 859 1150 83 0 0 chr17 35983385 35983530 -59289121 - B1_Mus1 SINE Alu 0 148 4 1 859 1113 115 24 6 chr17 35983641 35983807 -59288844 - B2_Mm2 SINE B2 0 195 27 1 859 667 26 0 0 chr17 35983856 35983934 -59288717 - B1_Mm SINE Alu -8 139 62 1 859 1424 74 26 5 chr17 35983949 35984139 -59288512 - B2_Mm2 SINE B2 0 195 2 1 859 252 0 0 0 chr17 35984838 35984866 -59287785 + (GGA)n Simple_repeat Simple_repeat 2 29 0 1 859 644 158 243 68 chr17 35986134 35986311 -59286340 - B3 SINE B2 -8 208 1 1 859 299 231 174 11 chr17 35986317 35986409 -59286242 - PB1D10 SINE Alu 0 117 11 1 859 480 197 246 15 chr17 35986345 35986479 -59286172 - ID_B1 SINE B4 -55 169 5 1 859 552 233 99 15 chr17 35986522 35986653 -59285998 + ID_B1 SINE B4 83 224 0 1 859 530 284 119 49 chr17 35986673 35986858 -59285793 + B3 SINE B2 14 211 -5 1 859 233 304 12 158 chr17 35986957 35987039 -59285612 - ID SINE ID -153 71 2 1 859 1754 10 0 0 chr17 35988299 35988491 -59284160 - B2_Mm1a SINE B2 0 193 2 1 859 769 299 66 5 chr17 35988523 35988721 -59283930 - B4 SINE B4 -82 210 1 1 859 216 0 0 0 chr17 35988737 35988761 -59283890 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 859 1060 102 0 0 chr17 35988761 35988898 -59283753 - B1_Mm SINE Alu -10 137 1 1 859 370 211 42 0 chr17 35991666 35991737 -59280914 + ID4 SINE ID 2 75 -8 1 859 408 122 49 0 chr17 35992312 35992394 -59280257 - L1Md_F2 LINE L1 -2 6580 6495 1 859 258 32 0 0 chr17 35992537 35992568 -59280083 + (T)n Simple_repeat Simple_repeat 1 31 0 1 859 657 82 24 106 chr17 35992568 35992691 -59279960 - B1_Mm SINE Alu 0 147 35 1 859 261 218 49 37 chr17 35992622 35992703 -59279948 - RLTR25B LTR ERVK -522 506 425 1 859 528 207 58 15 chr17 35992758 35992895 -59279756 + B3A SINE B2 1 143 -55 1 859 659 145 202 0 chr17 35993027 35993151 -59279500 + B1_Mur2 SINE Alu 1 149 0 1 859 689 244 12 43 chr17 35993172 35993335 -59279316 - B3 SINE B2 -7 209 52 1 859 201 229 0 0 chr17 35993395 35993443 -59279208 + T-rich Low_complexity Low_complexity 1 48 0 1 859 246 32 0 0 chr17 35993459 35993490 -59279161 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 859 1180 51 0 0 chr17 35993490 35993628 -59279023 - B1_Mus2 SINE Alu -9 138 1 1 859 351 125 0 0 chr17 35993633 35993681 -59278970 - URR1B DNA MER1_type -26 199 152 1 859 252 0 0 0 chr17 35993681 35993709 -59278942 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 1 859 1177 68 0 13 chr17 35993710 35993859 -59278792 - B1_Mus1 SINE Alu -1 147 1 1 859 790 254 99 20 chr17 35994078 35994279 -59278372 + ID_B1 SINE B4 1 217 -7 1 859 601 229 0 0 chr17 35994662 35994771 -59277880 + PB1D9 SINE Alu 5 113 -7 1 859 22 0 0 0 chr17 35995266 35995288 -59277363 + AT_rich Low_complexity Low_complexity 1 22 0 1 859 376 239 65 0 chr17 35995418 35995510 -59277141 + B1F1 SINE Alu 1 98 -51 1 859 712 121 134 24 chr17 35995510 35995637 -59277014 + B1_Mus2 SINE Alu 1 141 -6 1 859 1311 27 0 0 chr17 35995780 35995927 -59276724 - B1_Mm SINE Alu 0 147 1 1 859 263 151 37 19 chr17 35995958 35996012 -59276639 + ID_B1 SINE B4 105 159 -65 1 859 332 256 0 89 chr17 35996109 35996199 -59276452 - ID4_ SINE ID -1 82 1 1 859 273 312 127 27 chr17 35996342 35996602 -59276049 + L1MB5 LINE L1 5889 6174 0 1 859 589 203 124 33 chr17 35996850 35997003 -59275648 - B4 SINE B4 -18 274 108 1 859 314 241 69 0 chr17 35997107 35997194 -59275457 + PB1D10 SINE Alu 1 93 -24 1 859 525 219 34 34 chr17 35997116 35997234 -59275417 + ID_B1 SINE B4 93 210 -14 1 859 24 32 0 0 chr17 35997270 35997301 -59275350 + AT_rich Low_complexity Low_complexity 1 31 0 1 859 606 134 143 0 chr17 35997315 35997427 -59275224 + B3 SINE B2 1 128 -88 1 859 604 184 0 10 chr17 35997717 35997821 -59274830 - B1_Mus2 SINE Alu -7 140 38 1 859 460 248 76 0 chr17 35997855 35997960 -59274691 - PB1D10 SINE Alu -4 113 1 1 859 354 226 71 110 chr17 35998744 35998898 -59273753 + B1_Mur1 SINE Alu 1 148 -1 1 859 216 0 0 0 chr17 35998944 35998968 -59273683 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 859 224 161 66 82 chr17 35999067 35999128 -59273523 - B1F1 SINE Alu -2 147 88 1 859 1107 120 11 14 chr17 35999134 35999307 -59273344 - B1_Mus2 SINE Alu 0 311 7 1 859 423 0 0 0 chr17 35999307 35999354 -59273297 + (TTTC)n Simple_repeat Simple_repeat 3 49 0 1 859 1086 75 20 0 chr17 35999354 35999501 -59273150 - B2_Mm2 SINE B2 -15 180 31 1 859 729 54 21 0 chr17 35999529 35999622 -59273029 - B1_Mm SINE Alu -12 135 41 1 859 306 143 35 18 chr17 35999573 35999630 -59273021 - 4.5SRNA scRNA scRNA -8 86 29 1 859 285 29 0 0 chr17 35999633 35999667 -59272984 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 859 1127 88 0 0 chr17 35999677 35999825 -59272826 - B1_Mus1 SINE Alu 0 148 1 1 859 300 26 0 0 chr17 35999827 35999865 -59272786 - B3 SINE B2 -177 39 2 1 859 387 220 0 35 chr17 35999915 36000000 -59272651 - B3 SINE B2 -76 140 59 1 859 300 175 63 0 chr17 36000100 36000163 -59272488 - B4 SINE B4 -224 68 2 1 859 312 253 21 21 chr17 36003032 36003129 -59269522 + CT-rich Low_complexity Low_complexity 1 97 0 2 859 240 143 0 0 chr17 36004452 36004494 -59268157 + (CAG)n Simple_repeat Simple_repeat 1 42 0 3 859 195 42 0 0 chr17 36006594 36006618 -59266033 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 4 859 189 0 0 0 chr17 36007413 36007434 -59265217 + (TGGGGG)n Simple_repeat Simple_repeat 3 23 0 5 859 228 244 34 78 chr17 36008254 36008353 -59264298 + PB1D10 SINE Alu 52 149 0 6 859 786 217 57 0 chr17 36008368 36008543 -59264108 + B3 SINE B2 8 192 -24 7 859 280 227 22 43 chr17 36008558 36008650 -59264001 + MER2 DNA MER2_type 203 292 -53 8 859 1675 36 0 0 chr17 36008738 36008930 -59263721 + B2_Mm1a SINE B2 2 193 0 9 859 188 273 0 0 chr17 36009035 36009090 -59263561 - L2 LINE L2 -340 3079 3025 1 859 434 163 27 29 chr17 36009175 36009279 -59263372 + B1_Mur3 SINE Alu 10 147 -2 1 859 212 291 0 0 chr17 36009279 36009334 -59263317 + G-rich Low_complexity Low_complexity 2 56 0 1 859 1364 95 0 50 chr17 36009966 36010166 -59262485 - B2_Mm2 SINE B2 -3 192 3 1 859 245 170 0 21 chr17 36010175 36010223 -59262428 - ID_B1 SINE B4 -3 221 175 1 859 25 0 0 0 chr17 36010251 36010276 -59262375 + AT_rich Low_complexity Low_complexity 1 25 0 1 859 635 248 89 25 chr17 36010276 36010479 -59262172 - B3 SINE B2 0 216 1 1 859 276 30 0 0 chr17 36010796 36010829 -59261822 + (GGA)n Simple_repeat Simple_repeat 2 34 0 1 859 184 267 52 26 chr17 36011047 36011124 -59261527 + MIR SINE MIR 15 93 -169 1 859 264 312 0 0 chr17 36011184 36011248 -59261403 - ID4 SINE ID -17 66 3 1 859 290 155 276 35 chr17 36011343 36011430 -59261221 + B1F2 SINE Alu 24 131 -18 2 859 1501 54 16 0 chr17 36012583 36012769 -59259882 + B2_Mm2 SINE B2 1 189 -6 2 859 1070 137 34 17 chr17 36012822 36013000 -59259651 - B2_Mm2 SINE B2 -14 181 1 2 859 1051 176 60 5 chr17 36013019 36013219 -59259432 - B3 SINE B2 -1 215 5 2 859 258 82 13 187 chr17 36013286 36013361 -59259290 - B2_Mm2 SINE B2 -17 178 117 2 859 400 300 0 20 chr17 36013380 36013482 -59259169 - B1_Mur2 SINE Alu -49 100 1 2 859 354 197 56 0 chr17 36013519 36013590 -59259061 + B3A SINE B2 5 79 -119 2 859 224 30 0 29 chr17 36013742 36013776 -59258875 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 2 859 1230 29 0 0 chr17 36013778 36013918 -59258733 - B1_Mus2 SINE Alu -7 140 1 2 859 1491 63 21 0 chr17 36013933 36014124 -59258527 - B2_Mm2 SINE B2 0 195 1 2 859 258 32 0 0 chr17 36014718 36014749 -59257902 + (TTA)n Simple_repeat Simple_repeat 2 32 0 3 859 1183 56 14 0 chr17 36014749 36014893 -59257758 - B1_Mus1 SINE Alu -2 146 1 3 859 1119 101 101 0 chr17 36014893 36015060 -59257591 - B2_Mm1a SINE B2 -4 189 5 3 859 304 351 0 0 chr17 36015103 36015177 -59257474 + ID_B1 SINE B4 82 155 -69 3 859 1170 82 0 0 chr17 36015178 36015325 -59257326 + B1_Mus1 SINE Alu 2 148 0 3 859 288 211 53 68 chr17 36015376 36015508 -59257143 + Lx4B LINE L1 6929 7058 0 3 859 394 323 4 16 chr17 36015612 36015758 -59256893 + B3 SINE B2 20 162 -36 3 859 378 0 0 0 chr17 36015770 36015812 -59256839 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 859 737 245 30 45 chr17 36015820 36015963 -59256688 + B3A SINE B2 1 148 -50 3 859 371 21 21 0 chr17 36015963 36016011 -59256640 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 859 737 245 30 45 chr17 36016011 36016068 -59256583 + B3A SINE B2 149 198 0 3 859 21 0 0 0 chr17 36016129 36016150 -59256501 + AT_rich Low_complexity Low_complexity 1 21 0 4 859 1050 38 106 0 chr17 36016155 36016287 -59256364 + B1_Mm SINE Alu 2 147 0 4 859 363 211 244 50 chr17 36016295 36016475 -59256176 - B3 SINE B2 0 216 2 4 859 231 236 0 35 chr17 36017133 36017190 -59255461 - B1F1 SINE Alu -41 108 54 4 859 425 227 4 0 chr17 36017372 36017457 -59255194 + ID SINE ID 2 89 -203 4 859 619 254 68 31 chr17 36017501 36017692 -59254959 + B3A SINE B2 1 198 0 4 859 651 231 40 34 chr17 36017756 36017956 -59254695 + B3 SINE B2 1 195 0 4 859 183 100 0 0 chr17 36018409 36018439 -59254212 + (GGA)n Simple_repeat Simple_repeat 3 32 0 4 859 1038 70 181 19 chr17 36021202 36021362 -59251289 - B2_Mm2 SINE B2 -9 186 1 4 859 473 244 98 8 chr17 36021366 36021498 -59251153 - B1F SINE Alu 0 149 6 4 859 494 217 0 49 chr17 36021678 36021862 -59250789 + (TATATG)n Simple_repeat Simple_repeat 4 178 0 5 859 714 178 11 22 chr17 36021844 36022022 -59250629 + (TATG)n Simple_repeat Simple_repeat 4 179 0 5 859 651 247 37 31 chr17 36022056 36022219 -59250432 - RSINE1 SINE B4 0 165 2 5 859 197 246 18 0 chr17 36024061 36024118 -59248533 - L2 LINE L2 -606 2813 2756 5 859 29 0 0 0 chr17 36024507 36024536 -59248115 + GC_rich Low_complexity Low_complexity 1 29 0 5 859 1134 61 0 0 chr17 36024613 36024760 -59247891 + (TG)n Simple_repeat Simple_repeat 1 147 0 5 859 442 93 40 0 chr17 36025646 36025721 -59246930 + PB1D9 SINE Alu 42 119 -1 5 859 839 195 195 0 chr17 36025853 36026027 -59246624 + B3 SINE B2 2 209 -7 5 859 920 177 0 0 chr17 36026595 36026742 -59245909 - B1_Mus1 SINE Alu 0 148 2 5 859 2153 183 33 72 chr17 36026813 36027202 -59245449 - RMER15 LTR ERVL 0 575 190 5 859 1180 68 0 7 chr17 36027202 36027349 -59245302 + B1_Mus2 SINE Alu 2 147 0 6 859 2153 183 33 72 chr17 36027349 36027448 -59245203 - RMER15 LTR ERVL -386 189 106 5 859 1032 38 0 0 chr17 36027545 36027677 -59244974 - B1_Mus2 SINE Alu 0 147 16 6 859 463 239 48 82 chr17 36027550 36027696 -59244955 - B4 SINE B4 -71 221 81 6 859 328 279 126 0 chr17 36028287 36028398 -59244253 + PB1 SINE Alu 1 125 -2 6 859 853 258 10 10 chr17 36028402 36028598 -59244053 + B3A SINE B2 2 197 -1 6 859 575 187 209 86 chr17 36028598 36028785 -59243866 + B3 SINE B2 5 214 -2 6 859 432 50 16 8 chr17 36028970 36029049 -59243602 - B1_Mus2 SINE Alu -33 116 36 6 859 256 164 18 35 chr17 36029001 36029058 -59243593 - RLTR25B LTR ERVK -543 485 430 6 859 1233 54 0 0 chr17 36029153 36029300 -59243351 + B1_Mus2 SINE Alu 1 147 0 6 859 488 234 64 8 chr17 36030544 36030669 -59241982 - RSINE1 SINE B4 -31 134 3 6 859 789 165 67 11 chr17 36030940 36031118 -59241533 - B2_Mm2 SINE B2 -1 194 7 7 859 189 94 0 0 chr17 36031118 36031150 -59241501 + (T)n Simple_repeat Simple_repeat 1 32 0 7 859 1169 81 0 0 chr17 36031150 36031298 -59241353 - B1_Mus1 SINE Alu 0 148 1 7 859 1620 52 0 0 chr17 36031321 36031513 -59241138 - B2_Mm1t SINE B2 0 193 2 7 859 539 287 38 0 chr17 36031567 36031724 -59240927 + RSINE1 SINE B4 3 165 0 7 859 264 152 119 0 chr17 36033072 36033131 -59239520 + B1F1 SINE Alu 84 149 0 7 859 27 73 0 0 chr17 36034048 36034103 -59238548 + GC_rich Low_complexity Low_complexity 1 55 0 7 859 22 35 0 0 chr17 36034165 36034194 -59238457 + GC_rich Low_complexity Low_complexity 1 29 0 7 859 1392 67 11 22 chr17 36035752 36035935 -59236716 + B2_Mm1t SINE B2 1 181 -12 7 859 201 74 0 0 chr17 36035935 36035962 -59236689 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 7 859 279 0 0 0 chr17 36036028 36036059 -59236592 + (TTA)n Simple_repeat Simple_repeat 2 32 0 8 859 775 148 39 15 chr17 36036059 36036189 -59236462 - B1_Mur1 SINE Alu -14 135 3 8 859 1020 84 0 7 chr17 36036215 36036359 -59236292 - B1_Mus1 SINE Alu 0 148 6 8 859 478 250 38 100 chr17 36036222 36036382 -59236269 - B4 SINE B4 -73 219 70 8 859 212 289 12 35 chr17 36037838 36037924 -59234727 + GA-rich Low_complexity Low_complexity 6 89 0 8 859 1169 35 35 0 chr17 36038630 36038772 -59233879 + B1_Mus1 SINE Alu 2 148 0 8 859 474 173 264 0 chr17 36039534 36039644 -59233007 + B1_Mur2 SINE Alu 9 147 -2 8 859 659 214 61 0 chr17 36039646 36039777 -59232874 + B1_Mur2 SINE Alu 1 139 -10 8 859 243 170 0 0 chr17 36040221 36040268 -59232383 + T-rich Low_complexity Low_complexity 1 47 0 8 859 327 128 159 6 chr17 36040268 36040348 -59232303 - B1_Mus1 SINE Alu 0 120 31 8 859 695 262 7 0 chr17 36040409 36040550 -59232101 - B1_Mur1 SINE Alu -5 144 3 9 859 884 268 19 0 chr17 36041369 36041578 -59231073 + ID_B1 SINE B4 10 222 -2 9 859 1002 238 9 27 chr17 36041581 36041801 -59230850 + B3 SINE B2 1 216 0 9 859 301 211 22 0 chr17 36041829 36041913 -59230738 + (TA)n Simple_repeat Simple_repeat 2 87 0 9 859 387 0 0 0 chr17 36041913 36041956 -59230695 + (CA)n Simple_repeat Simple_repeat 2 44 0 9 859 523 131 172 47 chr17 36041962 36042090 -59230561 - B1_Mur4 SINE Alu -1 149 6 9 859 1230 41 0 7 chr17 36042113 36042261 -59230390 + B1_Mus1 SINE Alu 1 147 -1 9 859 532 217 68 23 chr17 36042298 36042430 -59230221 + B3 SINE B2 65 202 -14 9 859 617 185 8 0 chr17 36042581 36042700 -59229951 - B1_Mur1 SINE Alu -5 144 25 9 859 231 176 0 73 chr17 36042713 36042768 -59229883 - ID_B1 SINE B4 0 224 174 9 859 330 325 15 19 chr17 36042796 36042906 -59229745 + PB1D7 SINE Alu 3 126 -1 1 859 639 158 0 0 chr17 36042910 36043011 -59229640 + B2_Mm2 SINE B2 1 101 -94 1 859 26 50 0 0 chr17 36043020 36043060 -59229591 + AT_rich Low_complexity Low_complexity 1 40 0 1 859 307 335 116 21 chr17 36043157 36043346 -59229305 + L2a LINE L2 2593 2799 -620 1 859 280 355 169 36 chr17 36043369 36043671 -59228980 + L2a LINE L2 2950 3277 -149 1 859 598 246 72 0 chr17 36043671 36043809 -59228842 - B1_Mur4 SINE Alu -1 149 2 1 859 280 355 169 36 chr17 36043809 36043927 -59228724 + L2a LINE L2 3278 3426 0 1 859 642 203 23 8 chr17 36044153 36044282 -59228369 + B1_Mur2 SINE Alu 12 142 -7 1 859 303 28 0 0 chr17 36044286 36044322 -59228329 + (CAAG)n Simple_repeat Simple_repeat 4 39 0 1 859 262 255 68 10 chr17 36044413 36044516 -59228135 + PB1 SINE Alu 18 126 -1 1 859 460 264 27 0 chr17 36044516 36044626 -59228025 + PB1D7 SINE Alu 1 113 -7 1 107 1003 131 82 38 chr17 36044637 36044820 -59227831 + B2_Mm2 SINE B2 3 193 -2 1 860 273 313 176 0 chr17 36044861 36045043 -59227608 + Lx9 LINE L1 7409 7622 -22 1 860 621 243 21 0 chr17 36045075 36045219 -59227432 + B1_Mus2 SINE Alu 1 147 0 1 860 887 231 35 15 chr17 36045222 36045424 -59227227 + B3 SINE B2 1 206 -10 1 860 1146 38 0 0 chr17 36048748 36048880 -59223771 + B1_Mus2 SINE Alu 2 133 -14 1 860 475 110 55 0 chr17 36048968 36049041 -59223610 - B1_Mur2 SINE Alu -10 139 63 1 860 240 309 48 0 chr17 36049435 36049519 -59223132 + 4.5SRNA scRNA scRNA 6 93 -1 1 860 242 169 102 0 chr17 36049524 36049583 -59223068 + PB1D9 SINE Alu 26 90 -30 1 860 442 203 195 0 chr17 36049629 36049752 -59222899 + B1_Mus1 SINE Alu 1 147 -1 1 860 281 345 35 0 chr17 36050479 36050592 -59222059 + PB1D10 SINE Alu 1 117 0 1 860 651 178 80 22 chr17 36050994 36051132 -59221519 - B1_Mus2 SINE Alu -1 146 1 1 860 866 103 231 6 chr17 36052069 36052225 -59220426 + B2_Mm1t SINE B2 3 193 0 1 860 1122 82 0 26 chr17 36052237 36052388 -59220263 + B1_Mm SINE Alu 1 147 0 1 860 240 86 0 0 chr17 36056176 36056211 -59216440 + (T)n Simple_repeat Simple_repeat 1 35 0 1 860 491 262 74 60 chr17 36061466 36061549 -59211102 + ID_B1 SINE B4 5 218 -2 1 860 659 227 31 0 chr17 36061549 36061677 -59210974 + B1_Mur1 SINE Alu 12 143 -6 1 860 459 35 0 0 chr17 36061891 36061948 -59210703 + (TC)n Simple_repeat Simple_repeat 1 57 0 1 860 752 199 35 14 chr17 36062040 36062183 -59210468 - B1_Mur3 SINE Alu -3 146 1 1 860 411 278 6 138 chr17 36062271 36062438 -59210213 - B1_Mm SINE Alu -2 145 1 1 860 951 49 156 0 chr17 36062687 36062809 -59209842 + B1_Mm SINE Alu 2 142 -5 1 860 21 57 0 0 chr17 36063053 36063088 -59209563 + AT_rich Low_complexity Low_complexity 1 35 0 1 860 3466 28 2 2 chr17 36064151 36064545 -59208106 - MTA_Mm LTR MaLR -2 394 1 1 860 707 191 6 58 chr17 36065911 36066067 -59206584 + B1_Mur3 SINE Alu 1 148 -1 1 860 264 160 40 0 chr17 36066570 36066620 -59206031 - B1F SINE Alu 0 149 98 1 860 225 0 0 0 chr17 36068649 36068674 -59203977 + (CACTG)n Simple_repeat Simple_repeat 1 25 0 1 860 351 236 70 39 chr17 36069791 36069919 -59202732 - RNERVK23-int LTR ERVK -2569 5648 5517 1 860 969 61 9 1 chr17 36069925 36070057 -59202594 - B1_Mus2 SINE Alu 0 147 16 1 860 850 157 24 0 chr17 36070057 36070223 -59202428 - RMER16-int LTR ERVK -1741 3665 3496 1 860 217 0 29 29 chr17 36070223 36070257 -59202394 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 860 1155 72 0 0 chr17 36070257 36070395 -59202256 - B1_Mus1 SINE Alu -10 138 1 1 860 335 104 0 0 chr17 36070395 36070443 -59202208 - RMER16-int LTR ERVK -1952 3454 3407 1 860 422 73 0 0 chr17 36070480 36070535 -59202116 - RMER16-int LTR ERVK -2995 2411 2357 1 860 1853 88 47 10 chr17 36070527 36070825 -59201826 - RMER16-int LTR ERVK -3252 2154 1846 1 860 767 212 55 89 chr17 36070871 36070912 -59201739 - B3 SINE B2 -20 196 165 1 860 192 77 0 0 chr17 36070912 36070938 -59201713 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1 860 1223 71 0 13 chr17 36070938 36071098 -59201553 - B2_Mm2 SINE B2 -52 164 2 1 860 1631 70 173 4 chr17 36071098 36071369 -59201282 - RMER16-int LTR ERVK -3544 1862 1546 1 860 1044 117 18 24 chr17 36071371 36071537 -59201114 - B2_Mm2 SINE B2 -3 192 28 1 860 420 98 0 0 chr17 36071543 36071604 -59201047 - RMER16-int LTR ERVK -3858 1548 1488 1 860 242 250 18 0 chr17 36071622 36071678 -59200973 - MTC-int LTR MaLR -283 975 919 1 860 1806 93 26 126 chr17 36071791 36072064 -59200587 - RMER16-int LTR ERVK -3981 1425 1190 1 860 1199 43 0 0 chr17 36072064 36072203 -59200448 - B1_Mus2 SINE Alu -8 139 1 1 860 1806 93 26 126 chr17 36072203 36072311 -59200340 - RMER16-int LTR ERVK -4217 1189 1082 1 860 192 159 30 60 chr17 36072312 36072379 -59200272 + CT-rich Low_complexity Low_complexity 1 65 0 1 860 192 40 0 0 chr17 36072379 36072404 -59200247 + (CTTTG)n Simple_repeat Simple_repeat 2 26 0 1 860 5002 103 41 23 chr17 36072949 36073762 -59198889 - RMER16-int LTR ERVK -4321 1085 259 1 860 2414 142 5 28 chr17 36073762 36074009 -59198642 - RMER16-int LTR ERVK -5016 390 152 1 860 1305 77 28 6 chr17 36074009 36074191 -59198460 - B2_Mm2 SINE B2 -9 186 1 1 860 2414 142 5 28 chr17 36074191 36074342 -59198309 - RMER16-int LTR ERVK -5255 151 1 1 860 1750 150 93 34 chr17 36074342 36074728 -59197923 - RMER16 LTR ERVK 0 533 1 1 860 392 262 88 41 chr17 36075022 36075193 -59197458 + B2_Mm2 SINE B2 10 188 -7 1 860 216 0 0 0 chr17 36075200 36075224 -59197427 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1 860 996 42 0 0 chr17 36075226 36075346 -59197305 - B1_Mm SINE Alu -6 141 22 1 860 1180 123 6 16 chr17 36075346 36075528 -59197123 - B2_Mm1t SINE B2 -13 180 1 1 860 383 246 102 34 chr17 36075592 36075704 -59196947 + B3 SINE B2 91 211 -5 1 860 853 85 17 8 chr17 36075704 36075823 -59196828 + PB1D9 SINE Alu 1 120 0 1 860 611 215 79 29 chr17 36075867 36076006 -59196645 - B1_Mur2 SINE Alu -1 148 3 1 860 333 125 0 0 chr17 36076107 36076155 -59196496 + B1_Mus2 SINE Alu 68 115 -32 1 860 360 0 0 0 chr17 36076155 36076195 -59196456 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 860 444 273 100 57 chr17 36076366 36076506 -59196145 + RSINE1 SINE B4 1 146 -19 1 860 698 162 6 86 chr17 36076903 36077065 -59195586 + B1_Mur4 SINE Alu 2 150 0 1 860 882 148 193 28 chr17 36077077 36077251 -59195400 + ORR1C2 LTR MaLR 5 210 -174 1 860 1263 94 0 0 chr17 36077251 36077431 -59195220 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 860 1206 62 7 0 chr17 36077459 36077605 -59195046 - B1_Mm SINE Alu 0 147 1 1 860 592 77 11 11 chr17 36077607 36077699 -59194952 + (TTTC)n Simple_repeat Simple_repeat 3 94 0 1 860 1157 76 140 0 chr17 36077730 36077901 -59194750 - B2_Mm2 SINE B2 0 195 1 1 860 4454 6 0 0 chr17 36077953 36078432 -59194219 + LTRIS_Mm LTR ERV1 4 482 0 1 860 22682 89 55 38 chr17 36078432 36083040 -59189611 + MuRRS-int LTR ERV1 1 4690 0 1 860 4484 6 0 0 chr17 36083040 36083522 -59189129 + LTRIS_Mm LTR ERV1 1 482 0 1 860 632 137 3 11 chr17 36083522 36083624 -59189027 + ORR1C2 LTR MaLR 258 354 -24 1 860 1414 201 61 60 chr17 36083626 36084086 -59188565 - RMER4B LTR ERVK 0 585 56 1 860 242 247 123 0 chr17 36084121 36084194 -59188457 - B2_Mm1a SINE B2 -27 166 85 1 860 623 207 19 65 chr17 36084712 36084867 -59187784 + B1_Mur3 SINE Alu 1 148 -1 1 860 1210 75 0 0 chr17 36085501 36085648 -59187003 + B1_Mm SINE Alu 1 147 0 1 860 10055 88 10 62 chr17 36085882 36086390 -59186261 - MusHAL1 LINE L1 -627 2085 1588 1 860 1209 55 7 0 chr17 36086390 36086536 -59186115 + B1_Mus1 SINE Alu 2 148 0 1 860 10055 88 10 62 chr17 36086536 36087379 -59185272 - MusHAL1 LINE L1 -1125 1587 807 1 860 1020 104 14 0 chr17 36087379 36087523 -59185128 - B1_Mus1 SINE Alu 0 148 3 1 860 10055 88 10 62 chr17 36087523 36087916 -59184735 - MusHAL1 LINE L1 -1906 806 431 1 860 264 159 0 0 chr17 36087960 36088004 -59184647 - B1F SINE Alu -8 141 98 1 860 180 0 0 0 chr17 36089688 36089708 -59182943 + (CACTG)n Simple_repeat Simple_repeat 1 20 0 1 860 862 133 167 12 chr17 36090405 36090573 -59182078 + MTC LTR MaLR 1 194 -227 1 860 948 184 140 27 chr17 36090669 36090926 -59181725 - RMER4B LTR ERVK -262 323 38 1 860 813 156 84 0 chr17 36090913 36091067 -59181584 - B2_Mm2 SINE B2 -26 169 3 1 860 1154 76 0 0 chr17 36091070 36091215 -59181436 - B1_Mus2 SINE Alu -1 146 2 1 860 512 272 118 0 chr17 36091287 36091456 -59181195 - B3A SINE B2 -8 190 2 1 860 1174 99 21 37 chr17 36091488 36091677 -59180974 + B2_Mm2 SINE B2 2 187 -8 1 860 219 324 113 21 chr17 36091720 36091734 -59180917 - B3A SINE B2 0 198 185 1 860 572 200 80 15 chr17 36091734 36091871 -59180780 + B1_Mus1 SINE Alu 2 147 -1 1 860 219 324 113 21 chr17 36091871 36091998 -59180653 - B3A SINE B2 -14 184 44 1 860 1461 75 21 0 chr17 36092265 36092452 -59180199 + B2_Mm1a SINE B2 1 191 -2 1 860 694 203 16 0 chr17 36092720 36092850 -59179801 - B1_Mus2 SINE Alu -2 145 7 1 860 548 235 8 0 chr17 36095362 36095481 -59177170 - PB1D7 SINE Alu 0 120 1 1 860 248 296 9 101 chr17 36095383 36095492 -59177159 - MT2B LTR ERVL -350 251 153 1 860 357 282 83 25 chr17 36095650 36095770 -59176881 + PB1 SINE Alu 1 127 0 1 860 1259 58 0 0 chr17 36097298 36097452 -59175199 + B2_Mm2 SINE B2 1 154 -41 1 860 1132 118 23 47 chr17 36098314 36098567 -59174084 - B2_Mm1t SINE B2 0 216 2 1 860 300 189 0 0 chr17 36099091 36099144 -59173507 + B1_Mus2 SINE Alu 83 135 -12 1 860 421 207 0 44 chr17 36099160 36099257 -59173394 - PB1D9 SINE Alu -20 100 10 1 860 195 152 0 0 chr17 36099278 36099324 -59173327 + A-rich Low_complexity Low_complexity 1 46 0 1 860 315 0 0 0 chr17 36099334 36099369 -59173282 + (CCA)n Simple_repeat Simple_repeat 3 37 0 1 860 231 36 0 0 chr17 36099595 36099623 -59173028 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 1 860 313 214 108 39 chr17 36099900 36100002 -59172649 - B1_Mur2 SINE Alu -11 138 30 1 860 396 290 0 0 chr17 36101018 36101156 -59171495 + (GGCTG)n Simple_repeat Simple_repeat 4 141 0 1 860 1128 89 7 0 chr17 36101566 36101712 -59170939 + B1_Mus1 SINE Alu 2 148 0 1 860 459 183 98 48 chr17 36101715 36101856 -59170795 - PB1D9 SINE Alu 0 148 1 1 860 211 203 208 92 chr17 36101740 36101870 -59170781 - B4 SINE B4 -69 223 79 1 860 1187 51 0 0 chr17 36102116 36102254 -59170397 + B1_Mus1 SINE Alu 1 138 -10 2 860 210 37 0 0 chr17 36102254 36102281 -59170370 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 860 430 164 203 0 chr17 36102423 36102538 -59170113 - B1_Mus2 SINE Alu 0 147 1 2 860 423 241 101 35 chr17 36102562 36102747 -59169904 - B3A SINE B2 -7 188 1 2 860 963 58 84 28 chr17 36103122 36103265 -59169386 - B2_Mm2 SINE B2 -43 152 2 2 860 413 248 38 9 chr17 36103543 36103649 -59169002 - PB1D10 SINE Alu -8 109 1 2 860 466 262 0 36 chr17 36103662 36103773 -59168878 - B1_Mm SINE Alu -39 108 2 2 860 317 282 78 78 chr17 36103773 36103811 -59168840 - MT2B LTR ERVL -447 154 117 2 860 264 337 86 11 chr17 36103992 36104085 -59168566 + PB1D7 SINE Alu 18 117 -3 2 860 580 291 13 0 chr17 36104126 36104277 -59168374 + ID_B1 SINE B4 72 224 0 2 860 228 265 56 78 chr17 36104561 36104651 -59168000 + RSINE1 SINE B4 59 146 -19 2 860 1037 166 78 25 chr17 36104671 36104875 -59167776 + B3 SINE B2 1 215 -1 2 860 687 168 137 127 chr17 36104945 36104984 -59167667 + B3 SINE B2 2 40 -176 2 860 1557 47 16 0 chr17 36104984 36105174 -59167477 + B2_Mm1t SINE B2 1 193 0 2 860 687 168 137 127 chr17 36105174 36105339 -59167312 + B3 SINE B2 41 208 -8 2 860 670 259 14 0 chr17 36105368 36105515 -59167136 + B1_Mur1 SINE Alu 1 149 0 2 860 735 50 228 63 chr17 36105586 36105713 -59166938 - B1_Mus1 SINE Alu 0 148 1 2 860 704 186 22 58 chr17 36105902 36106018 -59166633 + B1_Mur4 SINE Alu 14 126 -24 2 860 808 155 7 13 chr17 36106018 36106168 -59166483 - B1_Mur3 SINE Alu 0 149 1 2 860 704 186 22 58 chr17 36106168 36106188 -59166463 + B1_Mur4 SINE Alu 127 145 -5 2 860 429 235 48 19 chr17 36106962 36107066 -59165585 - B1_Mur1 SINE Alu -13 136 30 2 860 659 113 25 50 chr17 36107066 36107187 -59165464 - PB1D9 SINE Alu 0 120 3 2 860 410 275 36 51 chr17 36107187 36107220 -59165431 - B1F2 SINE Alu -118 31 1 2 860 553 265 13 26 chr17 36107229 36107380 -59165271 - B1_Mur2 SINE Alu 0 149 1 2 860 740 123 0 0 chr17 36107713 36107819 -59164832 - B1_Mus1 SINE Alu -5 143 38 2 860 330 234 58 58 chr17 36107743 36107829 -59164822 - MT2B LTR ERVL -337 264 179 2 860 734 298 30 30 chr17 36107948 36108149 -59164502 - ID_B1 SINE B4 -22 202 2 2 860 519 283 63 0 chr17 36108390 36108549 -59164102 - B3 SINE B2 -46 170 2 2 860 486 220 226 0 chr17 36108644 36108812 -59163839 + B3 SINE B2 5 210 -6 2 860 698 76 236 41 chr17 36108824 36108947 -59163704 - B1_Mus1 SINE Alu 0 148 2 2 860 1444 45 0 0 chr17 36108954 36109132 -59163519 - B2_Mm1a SINE B2 -2 191 14 2 860 234 193 0 240 chr17 36109191 36109266 -59163385 + RMER30 DNA MER1_type 2 58 -144 2 860 1152 61 7 7 chr17 36110785 36110933 -59161718 + B1_Mus1 SINE Alu 1 148 0 2 860 403 289 12 0 chr17 36110944 36111027 -59161624 + PB1D7 SINE Alu 1 84 -36 2 860 265 273 13 13 chr17 36111159 36111237 -59161414 - ID4 SINE ID -4 79 2 2 860 334 230 0 63 chr17 36111943 36112022 -59160629 - ID4_ SINE ID -9 74 1 2 860 1208 62 0 0 chr17 36112192 36112337 -59160314 - B1_Mus2 SINE Alu 0 147 3 2 860 641 53 11 0 chr17 36112449 36112543 -59160108 - L1Md_F3 LINE L1 -1 6583 6489 2 860 1114 97 0 0 chr17 36112639 36112784 -59159867 + B1_Mus2 SINE Alu 2 146 -1 2 860 324 321 92 28 chr17 36112971 36113112 -59159539 - B3 SINE B2 -40 176 27 2 860 535 288 57 38 chr17 36113172 36113331 -59159320 - RSINE1 SINE B4 0 165 4 2 860 240 163 20 0 chr17 36113620 36113669 -59158982 + ID_B1 SINE B4 175 224 0 2 860 569 288 7 7 chr17 36113680 36113827 -59158824 + B1_Mur2 SINE Alu 1 147 -2 2 860 283 209 149 11 chr17 36113865 36113918 -59158733 - L1M3 LINE L1 -498 5673 5608 2 860 311 267 103 19 chr17 36113918 36114025 -59158626 - PB1D10 SINE Alu -1 116 1 2 860 283 219 152 11 chr17 36114025 36114071 -59158580 - L1M3 LINE L1 -582 5607 5559 2 860 675 289 90 5 chr17 36114212 36114400 -59158251 - B4A SINE B4 -88 204 1 2 860 812 98 197 0 chr17 36114447 36114569 -59158082 - B1_Mus1 SINE Alu -2 146 1 2 860 362 335 172 33 chr17 36114650 36114894 -59157757 - L1M5 LINE L1 -1039 5107 4830 2 860 390 212 0 59 chr17 36114906 36114991 -59157660 - ID_B1 SINE B4 -13 211 132 2 860 32 57 0 0 chr17 36117012 36117065 -59155586 + GC_rich Low_complexity Low_complexity 1 53 0 2 860 765 128 51 29 chr17 36118684 36118821 -59153830 - B1_Mur3 SINE Alu -8 141 2 2 860 240 207 10 172 chr17 36118976 36119075 -59153576 - ID2 SINE ID 0 83 1 2 860 249 57 0 0 chr17 36119707 36119742 -59152909 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 860 210 274 0 0 chr17 36119744 36119806 -59152845 + G-rich Low_complexity Low_complexity 5 66 0 2 860 446 238 15 11 chr17 36121040 36121162 -59151489 + B1_Mus2 SINE Alu 1 120 0 2 860 555 223 291 0 chr17 36121176 36121351 -59151300 + URR1A DNA MER1_type 1 226 0 2 860 343 252 194 47 chr17 36121459 36121472 -59151179 - B3 SINE B2 0 216 207 2 860 1127 57 0 34 chr17 36121472 36121618 -59151033 - B1_Mus1 SINE Alu -6 142 2 2 860 343 252 194 47 chr17 36121618 36121645 -59151006 - B3 SINE B2 -10 206 180 2 860 401 0 20 0 chr17 36121645 36121694 -59150957 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 860 225 0 0 0 chr17 36121694 36121718 -59150933 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 860 343 252 194 47 chr17 36121718 36121804 -59150847 - B3 SINE B2 -37 179 70 2 860 511 271 28 0 chr17 36122013 36122157 -59150494 + B1F SINE Alu 1 148 -1 2 860 219 36 0 0 chr17 36122306 36122334 -59150317 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 860 751 150 233 39 chr17 36123031 36123211 -59149440 + B3 SINE B2 1 215 -1 2 860 499 261 3 0 chr17 36123307 36123425 -59149226 - B1F1 SINE Alu 0 120 1 2 860 271 299 11 65 chr17 36123343 36123436 -59149215 - B4A SINE B4 -125 167 80 2 860 1347 231 18 72 chr17 36123722 36124017 -59148634 - ORR1D1 LTR MaLR -8 366 91 2 860 1119 113 153 5 chr17 36124017 36124046 -59148605 + URR1A DNA MER1_type 2 41 -185 2 860 315 0 0 0 chr17 36124046 36124081 -59148570 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 860 1119 113 153 5 chr17 36124081 36124247 -59148404 + URR1A DNA MER1_type 42 225 -1 2 860 1347 231 18 72 chr17 36124247 36124338 -59148313 - ORR1D1 LTR MaLR -284 90 1 2 860 186 43 0 0 chr17 36125536 36125559 -59147092 + (GGA)n Simple_repeat Simple_repeat 2 24 0 2 860 207 260 0 0 chr17 36125575 36125625 -59147026 + GA-rich Low_complexity Low_complexity 5 54 0 2 860 228 231 49 49 chr17 36126408 36126490 -59146161 - LTR79 LTR ERVL -294 233 152 2 860 794 93 0 0 chr17 36127169 36127276 -59145375 - B1_Mus2 SINE Alu 0 147 41 2 860 309 141 96 27 chr17 36127212 36127285 -59145366 - RLTR25B LTR ERVK -519 509 432 2 860 417 245 0 0 chr17 36127286 36127596 -59145055 + CT-rich Low_complexity Low_complexity 1 310 0 2 860 368 86 0 33 chr17 36127642 36127702 -59144949 - B1_Mus2 SINE Alu -88 59 2 2 860 287 284 116 29 chr17 36127708 36127841 -59144810 - B1_Mur2 SINE Alu -1 148 5 2 860 1292 20 7 0 chr17 36128411 36128557 -59144094 + B1_Mus2 SINE Alu 1 147 0 2 860 462 267 125 7 chr17 36128720 36128856 -59143795 - B4A SINE B4 -89 203 52 2 860 977 93 151 7 chr17 36129284 36129436 -59143215 - B2_Mm2 SINE B2 -21 174 1 2 860 852 181 0 26 chr17 36129459 36129612 -59143039 + B1_Mur3 SINE Alu 1 149 0 2 860 550 205 54 0 chr17 36129621 36129733 -59142918 + PB1D9 SINE Alu 1 118 -2 2 860 288 0 0 0 chr17 36129929 36129961 -59142690 + (TC)n Simple_repeat Simple_repeat 1 32 0 2 860 396 0 0 0 chr17 36129961 36130005 -59142646 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 860 413 206 140 11 chr17 36130505 36130598 -59142053 + B3A SINE B2 2 106 -92 2 860 409 206 38 38 chr17 36130837 36130943 -59141708 + PB1D10 SINE Alu 1 106 -11 2 860 576 0 0 0 chr17 36131047 36131111 -59141540 + (TTTA)n Simple_repeat Simple_repeat 2 65 0 2 860 1008 97 20 20 chr17 36131113 36131260 -59141391 - B1_Mus2 SINE Alu 0 147 1 2 860 512 140 88 20 chr17 36131300 36131402 -59141249 + ORR1E LTR MaLR 16 124 -235 2 860 789 176 15 0 chr17 36131683 36131819 -59140832 - B1_Mus2 SINE Alu -8 139 2 2 860 253 256 49 49 chr17 36131835 36131917 -59140734 - L1MA9 LINE L1 0 6312 6231 2 860 565 236 119 40 chr17 36131923 36132175 -59140476 + B4 SINE B4 2 273 -19 2 860 263 274 196 0 chr17 36132205 36132307 -59140344 + B1_Mur3 SINE Alu 6 127 -22 2 860 368 242 110 0 chr17 36132358 36132449 -59140202 - PB1D9 SINE Alu -19 101 1 2 860 492 123 62 0 chr17 36132487 36132568 -59140083 + B3 SINE B2 2 87 -129 2 860 2097 139 47 36 chr17 36132726 36132847 -59139804 - RLTR14 LTR ERV1 -10 372 259 2 860 528 60 0 46 chr17 36132847 36132934 -59139717 - L1Md_F2 LINE L1 0 6582 6500 2 860 2097 139 47 36 chr17 36132934 36133177 -59139474 - RLTR14 LTR ERV1 -124 258 4 2 860 284 268 14 0 chr17 36133572 36133643 -59139008 + ERVL-E-int LTR ERVL 720 791 -4876 2 860 1302 20 0 0 chr17 36133719 36133865 -59138786 + B1_Mm SINE Alu 2 147 0 2 860 233 306 59 0 chr17 36134402 36134487 -59138164 + MER63D DNA AcHobo 151 240 -821 2 860 426 230 89 75 chr17 36134529 36134675 -59137976 - B1_Mus1 SINE Alu 0 148 1 2 860 540 306 25 56 chr17 36134713 36134910 -59137741 + B4A SINE B4 1 191 -101 2 860 618 228 91 132 chr17 36134907 36135150 -59137501 + MTEb LTR MaLR 139 371 -8 2 860 1023 163 122 5 chr17 36135198 36135323 -59137328 + ORR1D1 LTR MaLR 41 186 -192 2 860 209 83 28 0 chr17 36135323 36135359 -59137292 + (TCTG)n Simple_repeat Simple_repeat 4 40 0 3 860 1023 170 122 9 chr17 36135359 36135489 -59137162 + ORR1D1 LTR MaLR 180 319 -59 2 860 338 22 43 0 chr17 36135489 36135535 -59137116 + (TTTC)n Simple_repeat Simple_repeat 2 49 0 3 860 438 132 0 0 chr17 36135746 36135822 -59136829 + (TC)n Simple_repeat Simple_repeat 2 77 0 3 860 474 292 27 14 chr17 36135964 36136110 -59136541 + RSINE1 SINE B4 3 150 -15 3 860 600 235 42 0 chr17 36136211 36136377 -59136274 - L1MB3 LINE L1 -17 6166 5994 3 860 692 67 0 0 chr17 36136581 36136671 -59135980 + B2_Mm2 SINE B2 2 91 -104 3 860 668 218 297 0 chr17 36136764 36136929 -59135722 - B3 SINE B2 -2 214 1 3 860 964 169 0 13 chr17 36136932 36137082 -59135569 - B1_Mur2 SINE Alu -1 148 1 3 860 446 207 214 9 chr17 36137168 36137280 -59135371 + B3 SINE B2 7 141 -75 3 860 744 34 0 0 chr17 36137276 36137364 -59135287 + B1_Mus2 SINE Alu 60 147 0 3 860 522 250 89 0 chr17 36137421 36137545 -59135106 + RSINE1 SINE B4 2 136 -29 3 860 231 36 0 0 chr17 36137550 36137578 -59135073 + (CTCA)n Simple_repeat Simple_repeat 3 30 0 3 860 1044 79 29 0 chr17 36138095 36138234 -59134417 - B1_Mus2 SINE Alu -3 144 2 3 860 462 61 0 0 chr17 36138379 36138445 -59134206 + (TTCTC)n Simple_repeat Simple_repeat 4 69 0 3 860 1198 191 101 0 chr17 36138486 36138774 -59133877 - RMER1C Other Other 0 1342 1026 3 860 350 122 0 0 chr17 36138774 36138823 -59133828 + B1_Mur4 SINE Alu 2 50 -100 3 860 21 0 0 0 chr17 36138859 36138880 -59133771 + GC_rich Low_complexity Low_complexity 1 21 0 3 860 277 281 170 82 chr17 36138952 36139111 -59133540 + MER88 LTR ERVL 24 196 -268 3 860 1000 234 55 62 chr17 36139178 36139598 -59133053 + ORR1D1 LTR MaLR 1 377 -17 3 860 276 261 56 22 chr17 36139618 36139708 -59132943 + MER88 LTR ERVL 347 439 -25 3 860 421 327 0 18 chr17 36139722 36139834 -59132817 + ID_B1 SINE B4 115 224 0 3 860 818 236 51 10 chr17 36140036 36140192 -59132459 + B3 SINE B2 2 166 -50 3 860 288 0 0 0 chr17 36140192 36140224 -59132427 + (TA)n Simple_repeat Simple_repeat 1 32 0 3 860 818 236 51 10 chr17 36140224 36140264 -59132387 + B3 SINE B2 167 206 -10 3 860 2389 162 32 0 chr17 36140371 36140779 -59131872 - MTC LTR MaLR 0 421 1 3 860 1298 27 0 0 chr17 36140780 36140926 -59131725 + B1_Mus2 SINE Alu 2 147 0 3 860 239 220 66 139 chr17 36141206 36141329 -59131322 - RLTR9B LTR ERVK 0 437 253 3 860 906 98 261 0 chr17 36141329 36141482 -59131169 - B2_Mm2 SINE B2 -1 194 2 3 860 234 329 123 92 chr17 36141482 36141607 -59131044 - RLTR9B LTR ERVK -116 252 114 3 860 1297 77 6 0 chr17 36141607 36141776 -59130875 + B2_Mm1a SINE B2 2 171 -22 3 860 4345 151 89 122 chr17 36141778 36142163 -59130488 - ORR1A1-int LTR MaLR -545 1247 873 3 860 1211 61 0 0 chr17 36142163 36142310 -59130341 - B1_Mus2 SINE Alu 0 147 1 3 860 4345 151 89 122 chr17 36142310 36143077 -59129574 - ORR1A1-int LTR MaLR -920 872 133 3 860 1172 183 109 15 chr17 36143147 36143360 -59129291 - RMER19B LTR ERVK -191 711 476 3 860 1414 58 26 21 chr17 36143360 36143552 -59129099 + B2_Mm1a SINE B2 1 193 0 3 860 1172 183 109 15 chr17 36143552 36143604 -59129047 - RMER19B LTR ERVK -427 475 422 3 860 414 0 0 0 chr17 36143888 36143934 -59128717 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 860 3030 18 0 3 chr17 36144088 36144426 -59128225 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 860 54321 20 14 6 chr17 36144426 36150849 -59121802 + IAPEz-int LTR ERVK 8 6481 0 3 860 3010 18 0 3 chr17 36150849 36151185 -59121466 + IAPLTR1a_Mm LTR ERVK 1 335 -2 3 860 180 0 0 0 chr17 36152027 36152047 -59120604 + (CAGA)n Simple_repeat Simple_repeat 2 21 0 3 860 276 263 0 0 chr17 36153023 36153080 -59119571 + B4A SINE B4 87 143 -149 3 860 338 242 0 0 chr17 36153076 36153142 -59119509 + ID_B1 SINE B4 151 216 -8 3 860 186 43 0 0 chr17 36153143 36153166 -59119485 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 3 860 615 195 8 68 chr17 36153649 36153781 -59118870 - B1F SINE Alu -25 124 1 3 860 879 225 28 6 chr17 36154653 36154832 -59117819 + B3 SINE B2 1 183 -33 3 860 1370 77 16 16 chr17 36155415 36155601 -59117050 - B2_Mm2 SINE B2 -9 186 1 3 860 581 200 38 0 chr17 36155638 36155743 -59116908 - PB1D10 SINE Alu -7 110 2 3 860 470 125 109 2 chr17 36155952 36156051 -59116600 - B1_Mur4 SINE Alu -2 148 34 3 860 289 300 36 36 chr17 36156212 36156295 -59116356 - PB1D7 SINE Alu -37 83 1 3 860 235 280 0 0 chr17 36156302 36156352 -59116299 - MLT2C1 LTR ERVL -347 50 1 3 860 1945 133 34 34 chr17 36156479 36156828 -59115823 + RLTR15 LTR ERVK 1 349 -10 3 860 320 214 30 101 chr17 36156886 36156985 -59115666 + RSINE1 SINE B4 74 165 0 3 860 312 247 214 10 chr17 36157062 36157160 -59115491 + B3 SINE B2 7 124 -71 3 860 413 178 261 36 chr17 36157228 36157339 -59115312 + B1_Mur2 SINE Alu 6 141 -8 3 860 180 0 0 0 chr17 36157538 36157558 -59115093 + (TGGGGG)n Simple_repeat Simple_repeat 4 23 0 3 860 285 288 16 151 chr17 36158040 36158082 -59114569 - B2_Mm2 SINE B2 -2 193 163 3 860 360 0 0 0 chr17 36158082 36158122 -59114529 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 860 2252 80 41 19 chr17 36158122 36158441 -59114210 - ORR1A4 LTR MaLR -3 326 1 3 860 408 288 16 151 chr17 36158441 36158589 -59114062 - B3 SINE B2 -30 186 28 3 860 540 267 52 0 chr17 36158587 36158722 -59113929 + B4A SINE B4 37 178 -114 3 860 1473 63 16 5 chr17 36158909 36159099 -59113552 + B2_Mm2 SINE B2 1 192 -3 3 860 766 209 51 17 chr17 36159108 36159283 -59113368 + B3A SINE B2 1 181 -17 3 860 2114 67 32 0 chr17 36159308 36159593 -59113058 - RLTR13C2 LTR ERVK 0 808 515 3 860 242 333 125 0 chr17 36159613 36159709 -59112942 + B4A SINE B4 110 217 -75 3 860 404 250 43 11 chr17 36160487 36160580 -59112071 - RSINE1 SINE B4 -6 159 64 3 860 1180 208 0 0 chr17 36161467 36161669 -59110982 + B3 SINE B2 14 215 -1 3 860 550 329 134 29 chr17 36162083 36162396 -59110255 - MTE2a LTR MaLR -14 365 20 3 860 738 252 55 205 chr17 36163038 36163531 -59109120 + MTD LTR MaLR 1 419 0 3 860 435 302 88 26 chr17 36163630 36163824 -59108827 + RCHARR1 DNA MER1_type 77 282 -692 3 860 432 217 200 0 chr17 36163790 36163864 -59108787 + B3 SINE B2 73 148 -68 3 860 471 78 0 0 chr17 36163864 36163928 -59108723 + (CA)n Simple_repeat Simple_repeat 2 65 0 3 860 432 217 200 0 chr17 36163928 36163973 -59108678 + B3 SINE B2 149 215 -1 3 860 298 258 9 51 chr17 36164041 36164170 -59108481 + ID_B1 SINE B4 34 218 -6 3 860 946 221 59 0 chr17 36164210 36164414 -59108237 + RCHARR1 DNA MER1_type 520 735 -239 3 860 588 258 8 0 chr17 36164441 36164569 -59108082 - ID_B1 SINE B4 -9 215 87 3 860 180 0 0 0 chr17 36164673 36164693 -59107958 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 3 860 712 189 30 0 chr17 36164694 36164826 -59107825 - B1_Mus1 SINE Alu -6 142 7 3 860 524 217 86 7 chr17 36164830 36164969 -59107682 + RCHARR1 DNA MER1_type 825 974 0 3 860 885 169 0 0 chr17 36165160 36165296 -59107355 + B1_Mur1 SINE Alu 3 138 -11 3 860 1503 48 0 36 chr17 36165299 36165493 -59107158 + B2_Mm2 SINE B2 1 187 -8 3 860 1375 209 58 33 chr17 36165818 36166347 -59106304 + RLTR1D LTR ERV1 1 608 -16 3 860 1176 185 146 18 chr17 36166351 36166631 -59106020 + ORR1D1 LTR MaLR 59 374 0 3 860 268 305 61 30 chr17 36166726 36166858 -59105793 - B2_Mm1t SINE B2 -3 190 55 3 860 211 216 0 0 chr17 36166826 36166863 -59105788 - B3 SINE B2 -131 85 49 3 860 453 81 0 0 chr17 36166900 36166962 -59105689 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 3 860 1357 25 6 0 chr17 36166962 36167121 -59105530 - B2_Mm1a SINE B2 -33 160 1 3 860 542 240 88 7 chr17 36169899 36170046 -59102605 - Lx5 LINE L1 -4 7046 6888 3 860 1461 62 0 5 chr17 36170046 36170239 -59102412 - B2_Mm2 SINE B2 -3 192 1 3 860 674 226 22 22 chr17 36170265 36170450 -59102201 - B3A SINE B2 -11 187 3 3 860 1534 226 103 116 chr17 36170592 36171137 -59101514 + Lx6 LINE L1 5858 6395 -1065 3 860 414 0 0 0 chr17 36171186 36171232 -59101419 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 3 860 498 196 19 0 chr17 36172588 36172705 -59099946 - B1_Mur2 SINE Alu -21 129 5 3 860 1158 114 11 0 chr17 36173159 36173335 -59099316 + B2_Mm1t SINE B2 2 179 -14 3 860 381 101 353 29 chr17 36173406 36173508 -59099143 + B2_Mm2 SINE B2 47 181 -14 3 860 1430 73 5 0 chr17 36173702 36173894 -59098757 + B2_Mm1a SINE B2 1 193 0 3 860 455 181 31 41 chr17 36173909 36174007 -59098644 + B3A SINE B2 1 97 -101 3 860 714 96 52 0 chr17 36174141 36174256 -59098395 - B1_Mus1 SINE Alu -6 142 22 3 860 717 218 19 6 chr17 36175170 36175327 -59097324 + RSINE1 SINE B4 3 161 -4 3 860 25 31 0 0 chr17 36175351 36175383 -59097268 + AT_rich Low_complexity Low_complexity 1 32 0 3 860 309 243 0 39 chr17 36175643 36175720 -59096931 - MTEa LTR MaLR -300 79 6 3 861 911 169 124 5 chr17 36176379 36176581 -59096070 - URR1A DNA MER1_type 0 226 1 3 861 543 31 0 0 chr17 36176630 36176695 -59095956 + (TTTC)n Simple_repeat Simple_repeat 4 68 0 3 861 1352 64 37 0 chr17 36176696 36176883 -59095768 - B2_Mm2 SINE B2 -1 194 1 3 861 217 118 19 19 chr17 36177276 36177328 -59095323 + GA-rich Low_complexity Low_complexity 1 52 0 3 861 378 0 0 0 chr17 36180177 36180219 -59092432 + (TCTG)n Simple_repeat Simple_repeat 2 43 0 3 861 426 242 0 10 chr17 36180222 36180318 -59092333 - B1_Mm SINE Alu -43 104 10 3 861 306 304 98 0 chr17 36180639 36180741 -59091910 - MLT1E3 LTR MaLR -455 169 58 3 861 879 10 0 0 chr17 36180993 36181093 -59091558 + (GA)n Simple_repeat Simple_repeat 1 100 0 3 861 848 192 108 5 chr17 36181271 36181475 -59091176 - URR1B DNA MER1_type 0 225 1 3 861 469 330 109 16 chr17 36181729 36182090 -59090561 - MLT1F1 LTR MaLR -4 556 177 3 861 449 129 0 47 chr17 36182092 36182198 -59090453 + GA-rich Low_complexity Low_complexity 2 102 0 4 861 1146 41 0 51 chr17 36183174 36183330 -59089321 + B1_Mus1 SINE Alu 1 148 0 4 861 198 0 0 0 chr17 36183330 36183352 -59089299 + (A)n Simple_repeat Simple_repeat 1 22 0 4 861 935 88 0 57 chr17 36183362 36183519 -59089132 + B1_Mus1 SINE Alu 1 148 0 4 861 1095 68 0 7 chr17 36183540 36183689 -59088962 + B1_Mus1 SINE Alu 1 148 0 4 861 1022 153 63 24 chr17 36183729 36183936 -59088715 + B3 SINE B2 1 215 -1 4 861 195 114 0 0 chr17 36183944 36183979 -59088672 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 4 861 435 184 164 17 chr17 36184087 36184203 -59088448 + B1_Mus1 SINE Alu 4 136 -12 4 861 189 0 0 0 chr17 36184204 36184225 -59088426 + (CAAAC)n Simple_repeat Simple_repeat 2 22 0 4 861 3215 8 0 0 chr17 36185964 36186331 -59086320 - IAPLTR1_Mm LTR ERVK 0 367 1 4 861 53757 23 18 2 chr17 36186331 36192704 -59079947 - IAPEz-int LTR ERVK 0 6481 8 4 861 3215 8 0 0 chr17 36192704 36193071 -59079580 - IAPLTR1_Mm LTR ERVK 0 367 1 4 861 225 247 11 45 chr17 36196258 36196347 -59076304 + (CATA)n Simple_repeat Simple_repeat 1 86 0 4 861 646 234 0 21 chr17 36198325 36198465 -59074186 - B1_Mur4 SINE Alu -10 140 4 4 861 235 297 17 112 chr17 36198465 36198541 -59074110 - MT2B2 LTR ERVL -429 155 97 4 861 343 273 48 41 chr17 36198657 36198802 -59073849 - B1_Mus2 SINE Alu -1 146 1 4 861 1058 80 0 0 chr17 36199443 36199581 -59073070 + B1_Mus1 SINE Alu 1 138 -10 4 861 306 0 0 0 chr17 36199581 36199615 -59073036 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 861 346 260 30 0 chr17 36199761 36199861 -59072790 + GA-rich Low_complexity Low_complexity 3 105 0 4 861 313 247 13 0 chr17 36199985 36200062 -59072589 + RMER21A LTR ERV1 99 176 -771 4 861 2614 225 86 75 chr17 36200084 36200950 -59071701 + RMER21A LTR ERV1 64 938 -9 4 861 418 231 123 0 chr17 36201297 36201427 -59071224 - B1_Mus1 SINE Alu 0 148 3 4 861 466 225 37 129 chr17 36202634 36202655 -59069996 + B4 SINE B4 74 79 -213 4 861 1021 95 0 0 chr17 36202655 36202802 -59069849 + B1_Mus1 SINE Alu 2 148 0 4 861 199 50 49 24 chr17 36202804 36202845 -59069806 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 4 861 235 238 198 47 chr17 36204700 36204806 -59067845 + RLTR6_Mm LTR ERV1 1 122 -532 4 861 2000 123 256 27 chr17 36204808 36205258 -59067393 + RLTR6_Mm LTR ERV1 37 589 -65 4 861 60369 35 12 0 chr17 36205258 36212849 -59059802 + RLTR6-int LTR ERV1 1 7778 0 4 861 240 228 198 47 chr17 36212849 36212955 -59059696 + RLTR6_Mm LTR ERV1 1 122 -532 4 861 1937 129 258 27 chr17 36212957 36213402 -59059249 + RLTR6_Mm LTR ERV1 37 584 -70 4 861 397 52 0 17 chr17 36213824 36213883 -59058768 - B1_Mm SINE Alu 0 147 90 4 861 516 72 0 0 chr17 36213885 36213954 -59058697 + (GA)n Simple_repeat Simple_repeat 1 69 0 4 861 432 55 0 0 chr17 36213956 36214011 -59058640 + (GGA)n Simple_repeat Simple_repeat 3 57 0 4 861 180 0 0 0 chr17 36214431 36214451 -59058200 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 4 861 874 116 0 0 chr17 36214451 36214580 -59058071 - B1_Mus2 SINE Alu -1 146 18 4 861 1194 34 0 0 chr17 36214958 36215105 -59057546 - B1_Mus2 SINE Alu 0 147 1 4 861 1169 115 27 0 chr17 36215286 36215469 -59057182 + B2_Mm2 SINE B2 1 188 -7 4 861 1031 175 50 0 chr17 36215487 36215687 -59056964 + B3 SINE B2 1 210 -6 4 861 228 86 0 0 chr17 36215702 36215737 -59056914 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 4 861 509 157 165 0 chr17 36215856 36215971 -59056680 + B1_Mur2 SINE Alu 5 138 -11 4 861 189 0 0 0 chr17 36215971 36215992 -59056659 + (CAAAC)n Simple_repeat Simple_repeat 2 22 0 4 861 1565 32 0 0 chr17 36218493 36218679 -59053972 + B2_Mm1a SINE B2 2 187 -6 4 861 237 211 0 0 chr17 36219559 36219616 -59053035 + A-rich Low_complexity Low_complexity 1 57 0 4 861 21 57 0 0 chr17 36220472 36220507 -59052144 + GC_rich Low_complexity Low_complexity 1 35 0 4 861 1469 234 41 22 chr17 36221447 36221858 -59050793 - MTD LTR MaLR 0 419 1 4 861 207 88 0 0 chr17 36222182 36222216 -59050435 + (TAGG)n Simple_repeat Simple_repeat 2 35 0 4 861 962 259 93 83 chr17 36222677 36222896 -59049755 - RMER17C-int LTR ERVK -15 3223 3005 4 861 1308 67 79 0 chr17 36222896 36222915 -59049736 - B2_Mm1a SINE B2 0 193 175 4 861 192 77 0 0 chr17 36222915 36222941 -59049710 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 4 861 1308 67 79 0 chr17 36222941 36223099 -59049552 - B2_Mm1a SINE B2 -19 174 3 4 861 962 271 123 98 chr17 36223099 36224956 -59047695 - RMER17C-int LTR ERVK -2175 3962 2365 4 861 1271 74 56 17 chr17 36224956 36225135 -59047516 - B2_Mm2 SINE B2 -9 186 1 4 861 890 274 131 102 chr17 36225135 36225300 -59047351 - RMER17C-int LTR ERVK -3773 2364 2184 4 861 755 188 20 31 chr17 36225424 36225613 -59047038 + B3 SINE B2 3 182 -13 4 861 315 221 56 43 chr17 36225741 36225902 -59046749 - MYSERV-int LTR ERVK -1040 5510 5348 4 861 268 261 137 8 chr17 36225976 36226101 -59046550 - RMER17C-int LTR ERVK -3742 1780 1639 4 861 256 140 63 95 chr17 36226123 36226186 -59046465 - RMER6B LTR ERVK 0 461 401 4 861 1014 181 69 0 chr17 36226172 36226360 -59046291 + RMER6A LTR ERVK 556 756 0 4 861 1062 97 0 0 chr17 36226522 36226656 -59045995 - B1_Mus1 SINE Alu -13 135 2 4 861 261 0 0 0 chr17 36226675 36226704 -59045947 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 4 861 533 97 0 0 chr17 36226705 36226777 -59045874 - B2_Mm2 SINE B2 -41 154 83 4 861 7146 159 14 28 chr17 36226782 36228156 -59044495 - MYSERV6-int LTR ERVK -1047 7912 6558 4 861 2438 74 20 6 chr17 36228497 36228838 -59043813 - L1_Mus3 LINE L1 -6 6632 6287 4 861 333 337 89 16 chr17 36229262 36229452 -59043199 - RodERV21-int LTR ERV1 -4787 204 1 4 861 1992 168 30 13 chr17 36229870 36230255 -59042396 - ORR1C2 LTR MaLR -1 383 9 4 861 255 268 89 8 chr17 36230662 36230786 -59041865 - Kanga1d DNA Tc2 -266 343 210 4 861 328 96 0 0 chr17 36230832 36230884 -59041767 + BGLII_B LTR ERVK 1 52 -389 4 861 180 152 0 0 chr17 36232001 36232034 -59040617 + GA-rich Low_complexity Low_complexity 1 33 0 4 861 466 261 89 46 chr17 36232478 36232838 -59039813 + L1_Mur3 LINE L1 4412 4775 -1105 4 861 1658 206 37 3 chr17 36233756 36234078 -59038573 - RLTR9B LTR ERVK -98 339 7 4 861 405 125 27 14 chr17 36234080 36234153 -59038498 - ETnERV2-int LTR ERVK -2 7404 7331 4 861 2982 155 30 21 chr17 36234153 36234687 -59037964 - RLTR13D6 LTR ERVK -363 539 1 4 861 1500 122 58 12 chr17 36234695 36234952 -59037699 - ETnERV3-int LTR ERVK -11 5797 5529 4 861 5099 103 19 17 chr17 36234966 36235778 -59036873 - RLTR45-int LTR ERVK -1173 6071 5259 4 861 370 145 0 26 chr17 36235778 36235856 -59036795 - RMER16-int LTR ERVK -2053 3353 3278 4 861 4852 135 40 13 chr17 36235862 36236765 -59035886 - ETnERV2-int LTR ERVK -3986 3420 2494 4 861 1515 116 0 18 chr17 36236756 36236984 -59035667 - ETnERV2-int LTR ERVK -5162 2244 2021 4 861 574 117 32 0 chr17 36236985 36237079 -59035572 + RLTR45-int LTR ERVK 2566 2662 -4582 4 861 1095 83 0 23 chr17 36237111 36237283 -59035368 - ETnERV2-int LTR ERVK -5384 2022 1855 4 861 3104 47 187 47 chr17 36237284 36237531 -59035120 + RLTR1B LTR ERV1 1 318 -194 4 861 1272 48 0 0 chr17 36237531 36237678 -59034973 - B1_Mus2 SINE Alu 0 147 1 4 861 3104 47 187 47 chr17 36237678 36237879 -59034772 + RLTR1B LTR ERV1 319 512 0 4 861 48314 25 0 7 chr17 36237879 36243630 -59029021 + MMERGLN-int LTR ERV1 1 5715 -1841 4 861 2501 14 0 0 chr17 36243628 36243917 -59028734 + MMERGLN-int LTR ERV1 7268 7556 0 4 861 3202 45 201 2 chr17 36243917 36244344 -59028307 + RLTR1B LTR ERV1 1 512 0 4 861 2719 121 223 19 chr17 36244344 36244987 -59027664 - ETnERV2-int LTR ERVK -5549 1857 1083 4 861 333 47 0 0 chr17 36244987 36245030 -59027621 + (TTTTA)n Simple_repeat Simple_repeat 4 46 0 4 861 858 260 30 60 chr17 36245033 36245365 -59027286 - ETnERV2-int LTR ERVK -2931 383 62 4 861 1837 193 19 76 chr17 36245418 36245850 -59026801 - RLTR9F LTR ERVK -8 407 1 4 861 231 289 90 38 chr17 36245995 36246128 -59026523 - B2_Mm2 SINE B2 -2 193 54 4 861 211 216 0 0 chr17 36246096 36246133 -59026518 - B3 SINE B2 -131 85 49 4 861 532 240 86 7 chr17 36248879 36249030 -59023621 - Lx5 LINE L1 0 7050 6888 4 861 1541 62 0 5 chr17 36249030 36249223 -59023428 - B2_Mm2 SINE B2 -3 192 1 4 861 736 226 22 22 chr17 36249249 36249434 -59023217 - B3A SINE B2 -11 187 3 4 861 1557 212 103 116 chr17 36249576 36250121 -59022530 + Lx6 LINE L1 5858 6395 -1065 4 861 207 0 0 0 chr17 36250170 36250193 -59022458 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 4 861 224 208 37 19 chr17 36250301 36250355 -59022296 - ID4_ SINE ID -12 71 17 4 861 219 36 0 0 chr17 36251537 36251565 -59021086 + (TTTC)n Simple_repeat Simple_repeat 4 31 0 4 861 517 217 0 0 chr17 36251565 36251657 -59020994 - B1_Mur4 SINE Alu -54 96 5 4 861 1261 119 11 0 chr17 36252111 36252287 -59020364 + B2_Mm1t SINE B2 2 179 -14 4 861 436 91 353 29 chr17 36252358 36252460 -59020191 + B2_Mm2 SINE B2 47 181 -14 4 861 501 170 31 41 chr17 36252656 36252754 -59019897 + B3A SINE B2 1 97 -101 4 861 252 0 0 0 chr17 36252869 36252897 -59019754 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 4 861 831 88 56 0 chr17 36252898 36253023 -59019628 - B1_Mus1 SINE Alu -6 142 11 4 861 788 199 19 19 chr17 36253849 36254008 -59018643 + RSINE1 SINE B4 3 161 -4 4 861 24 32 0 0 chr17 36254032 36254063 -59018588 + AT_rich Low_complexity Low_complexity 1 31 0 4 861 327 243 0 39 chr17 36254323 36254400 -59018251 - MTEa LTR MaLR -300 79 6 4 861 1002 164 124 5 chr17 36255059 36255261 -59017390 - URR1A DNA MER1_type 0 226 1 4 861 771 104 0 0 chr17 36255304 36255419 -59017232 + (TTTC)n Simple_repeat Simple_repeat 2 116 0 4 861 1379 58 0 0 chr17 36255424 36255595 -59017056 - B2_Mm2 SINE B2 -24 171 1 4 861 222 192 0 0 chr17 36255987 36256039 -59016612 + GA-rich Low_complexity Low_complexity 1 52 0 4 861 267 269 38 13 chr17 36256965 36257044 -59015607 - ID2 SINE ID -1 82 2 4 861 286 333 64 53 chr17 36258175 36258362 -59014289 - RLTR17 LTR ERVK -288 404 216 4 861 383 244 75 75 chr17 36258834 36258877 -59013774 - B1_Mur2 SINE Alu -7 142 103 4 861 261 0 0 0 chr17 36258877 36258906 -59013745 + (TCTG)n Simple_repeat Simple_repeat 3 31 0 4 861 404 219 35 12 chr17 36258906 36258995 -59013656 - B1_Mm SINE Alu -47 102 10 4 861 484 300 181 31 chr17 36259066 36259420 -59013231 - MLT1E3 LTR MaLR -161 463 57 4 861 328 290 47 157 chr17 36259590 36259861 -59012790 - RMER10A LTR ERVL -108 334 105 4 861 1037 172 108 0 chr17 36259861 36260064 -59012587 - URR1B DNA MER1_type 0 225 1 4 861 328 290 47 157 chr17 36260064 36260136 -59012515 - RMER10A LTR ERVL -338 104 29 4 861 517 320 111 25 chr17 36260318 36260674 -59011977 - MLT1F1 LTR MaLR -4 556 177 4 861 222 139 0 44 chr17 36260674 36260719 -59011932 + GA-rich Low_complexity Low_complexity 3 45 0 5 861 1129 61 0 51 chr17 36261679 36261835 -59010816 + B1_Mus1 SINE Alu 1 148 0 5 861 1042 163 62 29 chr17 36261874 36262082 -59010569 + B3 SINE B2 1 215 -1 5 861 228 86 0 0 chr17 36262090 36262125 -59010526 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 5 861 495 164 178 17 chr17 36262241 36262359 -59010292 + B1_Mur2 SINE Alu 2 138 -11 5 861 189 0 0 0 chr17 36262359 36262380 -59010271 + (CAAAC)n Simple_repeat Simple_repeat 2 22 0 5 861 198 118 0 0 chr17 36267351 36267385 -59005266 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 861 749 204 0 21 chr17 36269376 36269516 -59003135 - B1_Mur4 SINE Alu -10 140 4 5 861 305 277 42 11 chr17 36269762 36269857 -59002794 - PB1D10 SINE Alu -19 98 1 5 861 1123 80 0 0 chr17 36270497 36270635 -59002016 + B1_Mus1 SINE Alu 1 138 -10 5 861 432 0 0 0 chr17 36270635 36270683 -59001968 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 5 861 332 270 30 0 chr17 36270829 36270929 -59001722 + GA-rich Low_complexity Low_complexity 3 105 0 5 861 361 221 13 0 chr17 36271053 36271130 -59001521 + RMER21A LTR ERV1 99 176 -771 5 861 2772 213 105 84 chr17 36271151 36272016 -59000635 + RMER21A LTR ERV1 56 938 -9 5 861 376 261 123 0 chr17 36272362 36272492 -59000159 - B1_Mus1 SINE Alu 0 148 3 5 861 1151 90 0 0 chr17 36273727 36273872 -58998779 + B1_Mus1 SINE Alu 2 146 -2 5 861 201 39 0 0 chr17 36273872 36273898 -58998753 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 5 861 543 69 0 0 chr17 36276160 36276232 -58996419 + (TTTC)n Simple_repeat Simple_repeat 1 72 0 5 861 427 68 0 0 chr17 36276232 36276291 -58996360 - B1_Mm SINE Alu 0 147 89 5 861 459 0 0 0 chr17 36276291 36276342 -58996309 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 861 989 89 0 43 chr17 36276345 36276533 -58996118 + (GAA)n Simple_repeat Simple_repeat 1 180 0 5 861 837 127 0 0 chr17 36276533 36276667 -58995984 + (GGA)n Simple_repeat Simple_repeat 2 135 0 5 861 1139 95 0 0 chr17 36277106 36277253 -58995398 - B1_Mus2 SINE Alu 0 147 1 5 861 1356 91 11 0 chr17 36277465 36277652 -58994999 + B2_Mm1a SINE B2 1 189 -4 5 861 1051 150 33 11 chr17 36278695 36278877 -58993774 - B2_Mm2 SINE B2 -5 190 5 5 861 1610 21 27 0 chr17 36279737 36279924 -58992727 + B2_Mm1a SINE B2 2 193 0 5 861 325 353 82 18 chr17 36280406 36280576 -58992075 - MLT2F LTR ERVL -207 456 276 5 861 348 176 0 0 chr17 36281230 36281298 -58991353 + A-rich Low_complexity Low_complexity 1 68 0 5 861 1530 243 34 29 chr17 36283142 36283558 -58989093 - MTD LTR MaLR 0 419 2 5 861 219 103 0 0 chr17 36283876 36283915 -58988736 + (TAGG)n Simple_repeat Simple_repeat 1 39 0 5 861 752 228 146 103 chr17 36283965 36284831 -58987820 - RLTR19-int LTR ERVK -2175 3962 2391 5 861 1302 96 6 0 chr17 36284831 36285009 -58987642 - B2_Mm1a SINE B2 -14 179 1 5 861 752 216 171 80 chr17 36285009 36285058 -58987593 - RLTR19-int LTR ERVK -2693 3444 3388 5 861 2669 97 28 8 chr17 36285366 36285761 -58986890 - RLTR9D LTR ERVK 0 403 1 5 861 405 125 27 14 chr17 36285762 36285835 -58986816 - ETnERV2-int LTR ERVK -2 7404 7331 5 861 2926 166 30 22 chr17 36285835 36286370 -58986281 - RLTR13D6 LTR ERVK -363 539 1 5 861 1387 160 24 8 chr17 36286385 36286637 -58986014 - ETnERV3-int LTR ERVK -24 5784 5529 5 861 4866 115 14 17 chr17 36286650 36287466 -58985185 - RLTR45-int LTR ERVK -1172 6072 5307 5 861 3766 146 46 16 chr17 36287458 36288283 -58984368 - RLTR45-int LTR ERVK -3312 4094 3441 5 861 718 163 62 53 chr17 36288365 36288576 -58984075 - RLTR45-int LTR ERVK -3959 3447 3286 5 861 2474 87 14 3 chr17 36288576 36288924 -58983727 - L1_Mus3 LINE L1 0 6638 6287 5 861 384 319 74 5 chr17 36289341 36289530 -58983121 - RodERV21-int LTR ERV1 -4789 202 1 5 861 1477 278 62 52 chr17 36289837 36290355 -58982296 - RLTR1 LTR ERV1 0 624 105 5 861 381 22 0 0 chr17 36290355 36290401 -58982250 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 5 861 1477 278 62 52 chr17 36290401 36290500 -58982151 - RLTR1 LTR ERV1 -520 104 2 5 861 1820 167 44 16 chr17 36290633 36290998 -58981653 - ORR1C2 LTR MaLR -1 383 9 5 861 718 145 8 15 chr17 36291507 36291640 -58981011 + BGLII_B LTR ERVK 1 132 -309 5 861 248 304 0 59 chr17 36292457 36292576 -58980075 + (TATATG)n Simple_repeat Simple_repeat 1 112 0 5 861 266 224 17 183 chr17 36292615 36292735 -58979916 - RSINE1 SINE B4 -2 163 64 5 861 200 182 0 0 chr17 36293349 36293382 -58979269 + GA-rich Low_complexity Low_complexity 1 33 0 5 861 441 0 0 0 chr17 36294306 36294355 -58978296 + (GA)n Simple_repeat Simple_repeat 1 49 0 5 861 201 74 0 0 chr17 36294366 36294393 -58978258 + (GGA)n Simple_repeat Simple_repeat 2 28 0 5 861 509 334 58 30 chr17 36294445 36294775 -58977876 + L1M2 LINE L1 4062 4400 -1743 5 861 309 26 0 0 chr17 36295811 36295849 -58976802 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 861 183 80 0 0 chr17 36296998 36297023 -58975628 + (A)n Simple_repeat Simple_repeat 1 25 0 5 861 476 295 124 17 chr17 36297030 36297385 -58975266 + L1_Mur3 LINE L1 4383 4775 -1105 5 861 242 287 37 0 chr17 36297417 36297525 -58975126 + L1_Rod LINE L1 5724 5835 -12 5 861 509 333 98 42 chr17 36299438 36299795 -58972856 - MLT1F2 LTR MaLR -6 554 178 5 861 189 0 0 0 chr17 36299795 36299816 -58972835 + (GA)n Simple_repeat Simple_repeat 2 22 0 5 861 1247 218 178 0 chr17 36300144 36300191 -58972460 - ORR1C1 LTR MaLR 0 378 332 5 861 189 94 0 0 chr17 36300191 36300223 -58972428 + (CAA)n Simple_repeat Simple_repeat 1 32 0 5 861 1247 218 178 0 chr17 36300223 36300496 -58972155 - ORR1C1 LTR MaLR -47 331 3 5 861 2667 204 141 3 chr17 36300496 36301158 -58971493 - ORR1C1-int LTR MaLR 0 1509 757 5 861 1189 239 130 20 chr17 36301125 36301526 -58971125 - ORR1C1-int LTR MaLR -857 652 208 5 861 862 78 0 15 chr17 36303693 36303823 -58968828 + (GAA)n Simple_repeat Simple_repeat 2 129 0 5 861 197 65 32 0 chr17 36304701 36304732 -58967919 + (CCCCG)n Simple_repeat Simple_repeat 2 33 0 5 861 1677 252 36 19 chr17 36305734 36306146 -58966505 - MTD LTR MaLR 0 419 1 5 862 363 268 51 71 chr17 36306967 36307164 -58965487 - RLTR19-int LTR ERVK -15 3223 3031 5 862 911 205 114 137 chr17 36307188 36308024 -58964627 - RLTR19-int LTR ERVK -2175 3962 2607 5 862 473 233 33 8 chr17 36308396 36308517 -58964134 - MYSERV6-int LTR ERVK -276 8683 8560 5 862 700 251 75 72 chr17 36308598 36308946 -58963705 - RLTR19-int LTR ERVK -3357 2780 2432 5 862 692 159 123 72 chr17 36308954 36309026 -58963625 - RLTR19-int LTR ERVK -3398 2124 2056 5 862 1318 63 56 17 chr17 36309026 36309205 -58963446 - B2_Mm2 SINE B2 -9 186 1 5 862 692 159 123 72 chr17 36309205 36309383 -58963268 - RLTR19-int LTR ERVK -3467 2055 1861 5 862 701 172 16 0 chr17 36309496 36309618 -58963033 + B3 SINE B2 3 126 -90 5 862 360 190 77 55 chr17 36309813 36309980 -58962671 - MYSERV-int LTR ERVK -1060 5490 5348 5 862 307 270 22 0 chr17 36310092 36310181 -58962470 - RLTR19-int LTR ERVK -3742 1780 1690 5 862 246 140 63 95 chr17 36310203 36310266 -58962385 - RMER6B LTR ERVK 0 461 401 5 862 1005 191 69 0 chr17 36310252 36310440 -58962211 + RMER6A LTR ERVK 556 756 0 5 862 1103 61 0 0 chr17 36310605 36310736 -58961915 - B1_Mus1 SINE Alu -13 135 5 5 862 312 27 0 0 chr17 36310758 36310795 -58961856 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 5 862 512 111 0 0 chr17 36310796 36310868 -58961783 - B2_Mm2 SINE B2 -41 154 83 5 862 6614 160 44 31 chr17 36310873 36311524 -58961127 - MYSERV6-int LTR ERVK -1047 7912 7277 5 862 1170 68 0 0 chr17 36311524 36311671 -58960980 - B1_Mm SINE Alu 0 147 1 5 862 6614 160 44 31 chr17 36311671 36312358 -58960293 - MYSERV6-int LTR ERVK -1683 7276 6556 5 862 2438 74 20 6 chr17 36312697 36313038 -58959613 - L1_Mus3 LINE L1 -6 6632 6287 5 862 333 337 89 16 chr17 36313462 36313652 -58958999 - RodERV21-int LTR ERV1 -4787 204 1 5 862 1993 168 30 13 chr17 36314070 36314455 -58958196 - ORR1C2 LTR MaLR -1 383 9 5 862 255 268 89 8 chr17 36314861 36314985 -58957666 - Kanga1d DNA Tc2 -266 343 210 5 862 764 159 0 8 chr17 36315031 36315164 -58957487 + BGLII_B LTR ERVK 1 132 -309 5 862 497 16 16 0 chr17 36315419 36315481 -58957170 + (GA)n Simple_repeat Simple_repeat 1 63 0 5 862 195 42 0 0 chr17 36315492 36315516 -58957135 + (GGA)n Simple_repeat Simple_repeat 2 25 0 5 862 388 337 65 41 chr17 36315555 36315898 -58956753 + L1MC LINE L1 4048 4402 -1744 5 862 252 59 0 0 chr17 36316933 36316967 -58955684 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 862 480 286 131 19 chr17 36318114 36318471 -58954180 + L1_Mur3 LINE L1 4391 4759 -1121 5 862 302 0 26 0 chr17 36319480 36319518 -58953133 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 862 338 313 188 54 chr17 36319809 36320117 -58952534 - MLT1F1 LTR MaLR -4 556 205 5 862 513 0 0 0 chr17 36320117 36320174 -58952477 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 862 317 313 188 54 chr17 36320174 36320307 -58952344 - MLT1F1 LTR MaLR -348 212 57 5 862 1340 215 122 51 chr17 36320507 36320860 -58951791 - ORR1C1 LTR MaLR 0 378 1 5 862 3387 266 123 22 chr17 36320860 36322103 -58950548 - ORR1C1-int LTR MaLR 0 1370 2 5 862 422 211 202 0 chr17 36322103 36322210 -58950441 - B1_Mus2 SINE Alu -10 137 9 5 862 1148 147 16 0 chr17 36322623 36322807 -58949844 - B2_Mm2 SINE B2 -8 187 1 5 862 1002 96 7 0 chr17 36322852 36322987 -58949664 - B1_Mus1 SINE Alu -11 137 2 5 862 1102 126 91 0 chr17 36325029 36325186 -58947465 + B2_Mm1t SINE B2 2 160 -33 5 862 207 0 0 0 chr17 36325186 36325209 -58947442 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 5 862 1102 126 91 0 chr17 36325209 36325226 -58947425 + B2_Mm1t SINE B2 161 190 -3 5 862 257 291 23 8 chr17 36325322 36325450 -58947201 + L1_Mus4 LINE L1 5741 5870 -766 5 862 200 100 0 24 chr17 36325498 36325539 -58947112 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 5 862 307 138 24 24 chr17 36325699 36325781 -58946870 + (TCTCTG)n Simple_repeat Simple_repeat 3 84 0 5 862 232 250 0 0 chr17 36325962 36326030 -58946621 + A-rich Low_complexity Low_complexity 1 68 0 5 862 3022 53 11 5 chr17 36327507 36327889 -58944762 + L1_Mus1 LINE L1 6184 6567 0 5 862 556 196 0 11 chr17 36328471 36328652 -58943999 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 862 612 150 0 53 chr17 36328724 36328914 -58943737 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 862 426 39 0 0 chr17 36331070 36331122 -58941529 + (TTTTC)n Simple_repeat Simple_repeat 4 55 0 5 862 885 136 22 15 chr17 36332407 36332541 -58940110 - B1_Mus1 SINE Alu -10 138 4 5 862 545 218 47 40 chr17 36332720 36332868 -58939783 - B1_Mur3 SINE Alu 0 149 1 5 862 310 297 74 7 chr17 36333231 36333380 -58939271 - L1MA6 LINE L1 -27 6273 6115 5 862 3148 29 48 0 chr17 36333408 36333786 -58938865 - MTA_Mm LTR MaLR 0 396 1 5 862 256 135 30 30 chr17 36333959 36334058 -58938593 + T-rich Low_complexity Low_complexity 2 100 0 6 862 470 280 34 0 chr17 36334067 36334185 -58938466 - B1_Mus1 SINE Alu -1 147 26 6 862 459 330 115 62 chr17 36335857 36336183 -58936468 - MLT1F1 LTR MaLR -4 565 200 6 862 989 66 15 0 chr17 36336183 36336320 -58936331 + (GGGAGA)n Simple_repeat Simple_repeat 4 142 0 6 862 459 330 115 62 chr17 36336320 36336461 -58936190 - MLT1F1 LTR MaLR -370 199 73 6 862 2189 207 70 69 chr17 36336498 36337391 -58935260 + RMER6A LTR ERVK 1 756 0 6 862 917 61 0 0 chr17 36337566 36337680 -58934971 - B1_Mus1 SINE Alu -13 135 22 6 862 180 0 0 0 chr17 36337681 36337701 -58934950 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 6 862 976 112 6 50 chr17 36337702 36337862 -58934789 - B2_Mm2 SINE B2 -41 154 2 6 862 225 65 0 0 chr17 36337868 36337899 -58934752 + (T)n Simple_repeat Simple_repeat 1 31 0 6 862 1194 227 159 0 chr17 36337914 36338240 -58934411 - ORR1C1 LTR MaLR 0 378 1 6 862 1952 227 57 16 chr17 36338240 36338751 -58933900 - ORR1C1-int LTR MaLR 0 1509 978 6 862 628 311 108 28 chr17 36340987 36341590 -58931061 + L1M2 LINE L1 4140 4790 -1353 6 862 247 287 37 0 chr17 36341638 36341746 -58930905 + L1_Rod LINE L1 5724 5835 -12 6 862 1345 56 84 0 chr17 36343606 36343765 -58928886 + B2_Mm1t SINE B2 1 160 -33 6 862 207 0 0 0 chr17 36343765 36343788 -58928863 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 6 862 1345 56 84 0 chr17 36343788 36343806 -58928845 + B2_Mm1t SINE B2 161 191 -2 6 862 489 338 146 40 chr17 36343908 36344227 -58928424 - MLT1F2 LTR MaLR -4 556 211 6 862 468 0 0 0 chr17 36344227 36344279 -58928372 + (GA)n Simple_repeat Simple_repeat 1 52 0 6 862 489 338 146 40 chr17 36344279 36344412 -58928239 - MLT1F2 LTR MaLR -350 210 56 6 862 1321 209 137 35 chr17 36344613 36344956 -58927695 - ORR1C1 LTR MaLR 0 378 1 6 862 2608 226 121 11 chr17 36344956 36346196 -58926455 - ORR1C1-int LTR MaLR 0 1509 2 6 862 391 224 188 8 chr17 36346196 36346310 -58926341 - B1_Mus1 SINE Alu -11 137 3 6 862 1030 124 11 11 chr17 36350432 36350612 -58922039 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 6 862 477 246 0 17 chr17 36350615 36350789 -58921862 + G-rich Low_complexity Low_complexity 5 175 0 6 862 422 211 23 34 chr17 36350758 36350935 -58921716 + GA-rich Low_complexity Low_complexity 3 177 0 6 862 369 0 0 0 chr17 36351250 36351291 -58921360 + (GA)n Simple_repeat Simple_repeat 1 41 0 6 862 714 24 0 0 chr17 36351291 36351375 -58921276 + (GAA)n Simple_repeat Simple_repeat 3 86 0 6 862 839 301 139 24 chr17 36351396 36352029 -58920622 + L1M2 LINE L1 4061 4766 -1377 6 862 492 18 0 0 chr17 36353832 36353889 -58918762 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 862 351 0 0 0 chr17 36353893 36353932 -58918719 + (CCTG)n Simple_repeat Simple_repeat 1 39 0 6 862 360 245 162 9 chr17 36353967 36354078 -58918573 - RSINE1 SINE B4 -23 142 15 6 862 999 103 21 0 chr17 36354467 36354612 -58918039 + B1_Mus1 SINE Alu 1 148 0 6 862 921 162 52 36 chr17 36355264 36355456 -58917195 - B2_Mm2 SINE B2 0 195 1 6 862 573 276 143 0 chr17 36355850 36356046 -58916605 - MTE2a LTR MaLR 0 379 156 6 862 320 306 90 0 chr17 36356651 36356762 -58915889 - MTE2a LTR MaLR -199 180 60 6 862 248 309 10 49 chr17 36356764 36356866 -58915785 - MTE2a LTR MaLR -281 98 1 6 862 237 43 64 21 chr17 36357082 36357129 -58915522 + (TTTG)n Simple_repeat Simple_repeat 4 52 0 6 862 585 242 45 8 chr17 36357592 36357725 -58914926 - B1_Mm SINE Alu -9 138 1 6 862 941 152 13 0 chr17 36358745 36358896 -58913755 + L1VL2 LINE L1 246 398 -5937 6 862 4538 81 32 12 chr17 36358893 36359558 -58913093 + MusHAL1 LINE L1 1409 2086 -626 6 862 23 68 0 0 chr17 36359564 36359608 -58913043 + AT_rich Low_complexity Low_complexity 1 44 0 6 862 23 54 0 0 chr17 36359861 36359898 -58912753 + AT_rich Low_complexity Low_complexity 1 37 0 6 862 23 33 0 0 chr17 36360122 36360152 -58912499 + AT_rich Low_complexity Low_complexity 1 30 0 6 862 345 24 0 0 chr17 36360744 36360786 -58911865 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 862 352 267 35 0 chr17 36360839 36360925 -58911726 - RSINE1 SINE B4 -49 116 28 6 862 388 75 0 0 chr17 36360975 36361028 -58911623 - B1_Mur4 SINE Alu 0 150 98 6 862 1608 201 51 51 chr17 36361061 36361476 -58911175 - RLTR42-int LTR ERVK -1088 4434 4020 6 862 454 276 24 0 chr17 36361485 36361608 -58911043 + RMER1B Other Other 598 723 -343 6 862 244 233 67 0 chr17 36361880 36361940 -58910711 + RMER1C Other Other 824 887 -455 6 862 270 0 0 0 chr17 36362753 36362783 -58909868 + (TTTTA)n Simple_repeat Simple_repeat 5 34 0 6 862 24 0 0 0 chr17 36363451 36363475 -58909176 + AT_rich Low_complexity Low_complexity 1 24 0 6 862 411 107 0 0 chr17 36364316 36364391 -58908260 + (TCTG)n Simple_repeat Simple_repeat 3 77 0 6 862 372 245 153 9 chr17 36364411 36364522 -58908129 - RSINE1 SINE B4 -24 141 15 6 862 1233 47 0 7 chr17 36367764 36367913 -58904738 - B1_Mus1 SINE Alu 0 148 1 6 862 721 181 47 7 chr17 36367916 36368066 -58904585 - B2_Mm2 SINE B2 -2 193 38 6 862 671 128 7 1 chr17 36368068 36368205 -58904446 + B1_Mus2 SINE Alu 2 140 -9 6 862 295 79 0 0 chr17 36368556 36368594 -58904057 - B2_Mm2 SINE B2 -156 39 2 6 862 425 234 207 0 chr17 36368872 36369017 -58903634 - MTE2b LTR MaLR -1 378 204 6 862 230 337 0 48 chr17 36369721 36369824 -58902827 - MTE2b LTR MaLR -281 98 1 6 862 195 42 0 0 chr17 36370032 36370056 -58902595 + (TTG)n Simple_repeat Simple_repeat 2 25 0 6 862 2484 106 53 0 chr17 36370424 36370765 -58901886 - RLTR10D LTR ERVK 0 359 1 6 862 269 270 8 45 chr17 36370810 36370942 -58901709 + GA-rich Low_complexity Low_complexity 3 129 0 6 862 513 214 35 167 chr17 36372299 36372328 -58900323 + B4 SINE B4 67 136 -156 6 862 1038 58 0 48 chr17 36372328 36372379 -58900272 + B1_Mm SINE Alu 1 51 -96 6 862 2521 47 3 50 chr17 36372379 36372717 -58899934 + RLTRETN_Mm LTR ERVK 1 322 0 6 862 513 214 35 167 chr17 36372717 36372810 -58899841 + B4 SINE B4 137 217 -75 6 862 322 336 29 15 chr17 36372936 36373072 -58899579 - RSINE1 SINE B4 0 165 28 6 862 197 264 63 42 chr17 36373197 36373292 -58899359 - L2a LINE L2 -93 3333 3237 6 862 627 120 14 132 chr17 36373292 36373436 -58899215 - RLTR42-int LTR ERVK -1283 4239 4113 6 862 840 176 28 0 chr17 36373449 36373591 -58899060 - B1_Mus1 SINE Alu 0 148 3 6 862 499 156 0 11 chr17 36373594 36373685 -58898966 - RLTR42-int LTR ERVK -1413 4109 4020 6 862 1173 81 56 39 chr17 36373910 36374089 -58898562 + B2_Mm2 SINE B2 1 182 -13 6 862 334 171 71 0 chr17 36374119 36374189 -58898462 + RMER1C Other Other 819 893 -449 6 862 356 240 233 28 chr17 36374788 36374964 -58897687 + RMER1C Other Other 779 990 -352 6 862 210 107 0 0 chr17 36374967 36374995 -58897656 + (GA)n Simple_repeat Simple_repeat 2 29 0 6 862 579 208 0 0 chr17 36374995 36375120 -58897531 + GA-rich Low_complexity Low_complexity 4 128 0 6 862 1530 161 78 14 chr17 36375143 36375439 -58897212 + RMER1C Other Other 1019 1333 -9 6 862 3250 153 90 18 chr17 36375472 36376072 -58896579 - RLTR42-int LTR ERVK -2565 2957 2315 6 862 769 182 27 27 chr17 36376106 36376253 -58896398 - B1_Mus1 SINE Alu 0 148 2 6 862 297 0 0 0 chr17 36376274 36376307 -58896344 + (TTAA)n Simple_repeat Simple_repeat 1 33 0 6 862 1046 132 0 48 chr17 36376307 36376474 -58896177 - B2_Mm2 SINE B2 -34 161 3 6 862 740 181 71 46 chr17 36376476 36376510 -58896141 - RLTR42-int LTR ERVK -3196 2326 2295 6 862 1602 38 0 11 chr17 36376510 36376698 -58895953 - B2_Mm1a SINE B2 -7 186 1 6 862 740 181 71 46 chr17 36376698 36376860 -58895791 - RLTR42-int LTR ERVK -3228 2294 2125 6 862 449 157 80 53 chr17 36376995 36377183 -58895468 + RMER17C LTR ERVK 80 272 -138 6 862 401 172 0 11 chr17 36377187 36377275 -58895376 - RLTR42-int LTR ERVK -3461 2061 1975 6 862 645 218 17 43 chr17 36377286 36377442 -58895209 - B1_Mur3 SINE Alu 0 149 2 6 862 195 42 0 0 chr17 36377785 36377809 -58894842 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 6 862 24 32 0 0 chr17 36378521 36378552 -58894099 + AT_rich Low_complexity Low_complexity 1 31 0 6 862 775 76 5 279 chr17 36378604 36378805 -58893846 + B1_Mm SINE Alu 1 146 -1 6 862 840 219 101 57 chr17 36378823 36379051 -58893600 - 7SK RNA RNA -93 238 1 6 862 776 159 6 16 chr17 36379057 36379344 -58893307 + CT-rich Low_complexity Low_complexity 1 284 0 6 862 957 211 239 27 chr17 36379362 36379625 -58893026 - ORR1D2 LTR MaLR -41 329 11 6 862 281 259 12 47 chr17 36379678 36379763 -58892888 - Lx8 LINE L1 -867 6606 6525 6 862 777 53 0 0 chr17 36379793 36379888 -58892763 - B2_Mm2 SINE B2 -96 99 5 6 862 397 215 0 0 chr17 36379894 36379987 -58892664 + RLTR22_Mus LTR ERVK 662 754 -1054 6 862 23 0 0 0 chr17 36379987 36380010 -58892641 + AT_rich Low_complexity Low_complexity 1 23 0 6 862 299 220 78 85 chr17 36380041 36380170 -58892481 + RLTR22_Mur LTR ERVK 873 1000 -848 6 862 1372 45 57 6 chr17 36380178 36380355 -58892296 + B2_Mm2 SINE B2 1 186 -9 6 862 21 0 0 0 chr17 36380378 36380399 -58892252 + AT_rich Low_complexity Low_complexity 1 21 0 6 862 1045 88 0 0 chr17 36380483 36380619 -58892032 + B1_Mus2 SINE Alu 2 137 -10 6 862 249 33 0 0 chr17 36380619 36380649 -58892002 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 6 862 180 111 0 0 chr17 36380690 36380717 -58891934 + (GA)n Simple_repeat Simple_repeat 2 28 0 6 862 566 71 316 9 chr17 36380771 36380885 -58891766 - B2_Mm2 SINE B2 0 195 47 6 862 1167 102 72 0 chr17 36380980 36381146 -58891505 - B2_Mm1t SINE B2 -14 179 2 6 862 782 237 27 53 chr17 36381223 36381486 -58891165 + RLTR22_Mur LTR ERVK 1593 1848 0 6 862 759 274 0 22 chr17 36381581 36381760 -58890891 + B3A SINE B2 1 175 -23 6 862 3698 60 27 2 chr17 36381972 36382456 -58890195 + LTRIS2 LTR ERV1 69 564 0 6 862 989 148 53 27 chr17 36382537 36382725 -58889926 - B2_Mm2 SINE B2 0 195 3 6 862 619 147 242 45 chr17 36382869 36383026 -58889625 - B2_Mm2 SINE B2 -7 188 1 6 862 513 0 0 0 chr17 36383027 36383084 -58889567 + (TTTTG)n Simple_repeat Simple_repeat 2 58 0 6 862 577 193 79 198 chr17 36383100 36383262 -58889389 - B4 SINE B4 -69 223 97 6 862 658 165 157 0 chr17 36383262 36383377 -58889274 - B1_Mus2 SINE Alu -13 134 2 6 862 577 193 79 198 chr17 36383377 36383390 -58889261 - B4 SINE B4 -196 96 84 6 862 306 0 0 0 chr17 36383390 36383424 -58889227 + (TCTG)n Simple_repeat Simple_repeat 2 35 0 6 862 495 0 0 0 chr17 36383424 36383478 -58889173 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 6 862 577 193 79 198 chr17 36383478 36383552 -58889099 - B4 SINE B4 -209 83 3 6 862 1976 204 27 147 chr17 36383562 36383762 -58888889 + RLTR19A LTR ERVK 1 201 -295 6 862 3564 38 28 19 chr17 36383762 36384194 -58888457 - RLTR10C LTR ERVK 0 436 1 7 862 1976 204 27 147 chr17 36384194 36384236 -58888415 + RLTR19A LTR ERVK 202 234 -262 6 862 1169 75 0 0 chr17 36384236 36384383 -58888268 + B1_Mm SINE Alu 1 147 0 7 862 1976 204 27 147 chr17 36384383 36384703 -58887948 + RLTR19A LTR ERVK 235 496 0 6 862 525 28 14 0 chr17 36384794 36384865 -58887786 + B1_Mus2 SINE Alu 76 147 0 7 862 224 30 0 29 chr17 36384869 36384903 -58887748 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 7 862 287 89 0 82 chr17 36384914 36384963 -58887688 + B2_Mm2 SINE B2 1 45 -150 7 862 189 74 0 0 chr17 36386167 36386194 -58886457 + (TTG)n Simple_repeat Simple_repeat 2 28 0 7 862 1176 49 14 0 chr17 36386207 36386350 -58886301 - B1_Mus2 SINE Alu -2 145 1 7 862 439 244 67 30 chr17 36386433 36386568 -58886083 + B1F SINE Alu 1 140 -9 7 862 440 235 0 30 chr17 36386875 36386976 -58885675 - PB1D9 SINE Alu -22 98 1 7 862 288 319 0 0 chr17 36386923 36386992 -58885659 - B4 SINE B4 -154 138 70 7 862 7977 22 26 3 chr17 36387180 36388088 -58884563 - RLTR13B3 LTR ERVK 0 929 1 7 862 531 0 0 0 chr17 36388188 36388247 -58884404 + (TC)n Simple_repeat Simple_repeat 1 59 0 7 862 626 221 162 0 chr17 36389664 36389818 -58882833 - B3A SINE B2 -19 179 1 7 862 243 0 0 0 chr17 36389880 36389907 -58882744 + (TC)n Simple_repeat Simple_repeat 2 28 0 7 862 1340 90 26 5 chr17 36389942 36390132 -58882519 - B2_Mm2 SINE B2 0 195 2 7 862 342 164 91 52 chr17 36390186 36390263 -58882388 + ID4_ SINE ID 4 83 0 7 862 1726 186 24 101 chr17 36390298 36390752 -58881899 + RMER16 LTR ERVK 113 531 -2 7 862 207 0 0 0 chr17 36390755 36390778 -58881873 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 862 390 225 123 8 chr17 36390778 36390902 -58881749 + ID_B1 SINE B4 83 222 -2 7 862 1511 59 21 0 chr17 36391202 36391388 -58881263 - B2_Mm1a SINE B2 -2 191 2 7 862 619 145 11 233 chr17 36391391 36391580 -58881071 - B1_Mm SINE Alu 0 147 1 7 862 767 81 186 8 chr17 36391596 36391720 -58880931 - B1_Mm SINE Alu 0 147 2 7 862 327 325 60 0 chr17 36391804 36391921 -58880730 + MLT1H2 LTR MaLR 4 127 -362 7 862 207 69 0 0 chr17 36393391 36393420 -58879231 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 862 702 262 60 64 chr17 36393442 36393723 -58878928 - B4A SINE B4 -12 280 1 7 862 359 195 35 0 chr17 36393868 36393955 -58878696 + B1F SINE Alu 1 90 -59 7 862 188 34 0 33 chr17 36393972 36394002 -58878649 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 862 648 178 43 29 chr17 36394019 36394158 -58878493 - B1_Mus1 SINE Alu -3 145 5 7 862 310 262 41 36 chr17 36395165 36395276 -58877375 + PB1D10 SINE Alu 10 148 -1 7 862 898 54 130 8 chr17 36396401 36396532 -58876119 - B1_Mm SINE Alu 0 147 1 7 862 859 175 39 49 chr17 36399962 36400166 -58872485 - B3 SINE B2 -11 205 4 7 862 366 272 69 56 chr17 36400207 36400224 -58872427 + B4 SINE B4 77 95 -197 7 862 742 186 20 27 chr17 36400224 36400373 -58872278 + B1_Mur3 SINE Alu 2 149 0 7 862 297 51 0 0 chr17 36400437 36400476 -58872175 + (A)n Simple_repeat Simple_repeat 1 39 0 7 862 537 317 0 102 chr17 36401599 36401644 -58871007 + B3A SINE B2 1 41 -157 7 862 479 149 85 69 chr17 36401644 36401774 -58870877 + B1_Mus2 SINE Alu 2 133 -14 7 862 215 31 31 0 chr17 36401777 36401809 -58870842 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 7 862 537 317 0 102 chr17 36401809 36401945 -58870706 + B3A SINE B2 42 167 -31 7 862 522 219 44 0 chr17 36402142 36402256 -58870395 + PB1D9 SINE Alu 1 119 -1 7 862 294 257 75 9 chr17 36402589 36402695 -58869956 - PB1D7 SINE Alu -7 113 1 7 862 720 259 103 78 chr17 36402849 36403168 -58869483 + ORR1E LTR MaLR 14 340 -19 7 862 624 248 60 0 chr17 36403257 36403390 -58869261 + B1_Mur1 SINE Alu 1 141 -8 7 862 384 200 13 51 chr17 36403417 36403496 -58869155 + B3 SINE B2 28 103 -113 7 862 231 36 0 0 chr17 36403510 36403538 -58869113 + (CA)n Simple_repeat Simple_repeat 1 28 0 7 862 408 269 71 39 chr17 36403784 36403939 -58868712 - RSINE1 SINE B4 0 165 6 7 862 404 240 50 9 chr17 36404264 36404423 -58868228 - B3A SINE B2 -21 195 2 7 862 235 289 26 0 chr17 36404437 36404513 -58868138 - ID4 SINE ID -5 78 1 7 862 242 274 40 96 chr17 36404856 36404981 -58867670 - PB1D9 SINE Alu -2 118 1 7 862 397 239 32 32 chr17 36404892 36404987 -58867664 - ID_B1 SINE B4 -54 170 76 7 862 24 0 0 0 chr17 36406182 36406206 -58866445 + AT_rich Low_complexity Low_complexity 1 24 0 7 862 405 358 0 8 chr17 36406275 36406399 -58866252 + B1F SINE Alu 1 123 -26 7 862 225 258 106 0 chr17 36406490 36406556 -58866095 + PB1D7 SINE Alu 47 119 -1 7 862 3856 92 48 5 chr17 36408965 36409525 -58863126 - MT2B2 LTR ERVL 0 584 1 7 862 1262 111 143 116 chr17 36409757 36410155 -58862496 - RMER17C LTR ERVK 0 410 2 7 862 1540 214 98 89 chr17 36410321 36410891 -58861760 - RMER15 LTR ERVL 0 575 1 7 862 254 260 91 30 chr17 36411019 36411118 -58861533 - PB1D10 SINE Alu -9 108 4 7 862 244 275 89 24 chr17 36411537 36411660 -58860991 - L1MCc LINE L1 -5956 467 337 7 862 249 320 117 7 chr17 36413512 36413795 -58858856 + L2 LINE L2 2221 2534 -885 7 862 1534 62 5 0 chr17 36413943 36414135 -58858516 - B2_Mm1a SINE B2 0 193 1 7 862 881 171 33 6 chr17 36414232 36414414 -58858237 + B2_Mm2 SINE B2 3 189 -6 7 862 889 89 0 0 chr17 36414503 36414626 -58858025 - B1_Mus1 SINE Alu -11 137 15 7 862 228 67 0 0 chr17 36414768 36414798 -58857853 + (T)n Simple_repeat Simple_repeat 1 30 0 7 862 452 121 36 0 chr17 36414983 36415066 -58857585 - L1Md_F2 LINE L1 0 6582 6497 7 862 443 206 75 0 chr17 36415079 36415186 -58857465 - Tigger1 DNA MER2_type -218 2200 2086 7 862 311 224 65 13 chr17 36415192 36415269 -58857382 - PB1D7 SINE Alu -10 110 30 7 862 437 258 62 0 chr17 36415370 36415467 -58857184 + PB1D7 SINE Alu 1 103 -17 7 862 276 275 94 111 chr17 36415571 36415609 -58857042 + RMER15-int LTR ERVL 4807 4841 -158 7 862 1170 68 0 14 chr17 36415609 36415757 -58856894 - B1_Mus2 SINE Alu -1 146 1 7 862 276 275 94 111 chr17 36415757 36415898 -58856753 + RMER15-int LTR ERVL 4842 4983 -16 7 862 359 206 58 19 chr17 36416069 36416173 -58856478 + RMER15 LTR ERVL 359 466 -109 7 862 255 203 47 0 chr17 36416185 36416249 -58856402 - Lx8 LINE L1 -823 6650 6584 7 862 207 0 0 0 chr17 36416385 36416408 -58856243 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 862 842 67 17 0 chr17 36416408 36416520 -58856131 - B1_Mus1 SINE Alu -7 141 28 7 862 233 261 21 32 chr17 36416525 36416620 -58856031 + T-rich Low_complexity Low_complexity 3 96 0 7 862 242 336 70 35 chr17 36417055 36417169 -58855482 - PB1 SINE Alu -8 119 2 7 862 199 386 31 25 chr17 36417297 36417459 -58855192 + L2a LINE L2 2554 2716 -703 7 862 232 281 44 22 chr17 36417737 36417828 -58854823 + L2a LINE L2 3102 3194 -232 7 862 374 268 79 24 chr17 36418053 36418179 -58854472 - RSINE1 SINE B4 -27 138 6 7 862 613 300 48 51 chr17 36418334 36418626 -58854025 - B4A SINE B4 0 292 2 7 862 269 266 12 12 chr17 36418867 36418947 -58853704 + RMER15 LTR ERVL 367 446 -129 7 862 2068 149 38 59 chr17 36419172 36419563 -58853088 - ORR1C2 LTR MaLR -1 383 1 7 862 2300 74 24 0 chr17 36419888 36420207 -58852444 + L1_Mus4 LINE L1 5710 6021 -615 7 862 459 292 6 36 chr17 36424041 36424208 -58848443 - B3A SINE B2 -10 188 27 7 862 506 195 42 8 chr17 36424218 36424337 -58848314 - B1_Mur1 SINE Alu -5 144 22 7 862 250 313 46 13 chr17 36424355 36424507 -58848144 - Charlie1a DNA MER1_type -439 1016 860 7 862 1252 34 0 0 chr17 36424589 36424735 -58847916 + B1_Mm SINE Alu 2 147 0 7 862 246 155 11 56 chr17 36424737 36424826 -58847825 + A-rich Low_complexity Low_complexity 4 88 0 7 862 562 154 45 89 chr17 36425508 36425556 -58847095 - URR1A DNA MER1_type 0 226 188 7 862 1922 153 3 7 chr17 36425556 36425865 -58846786 + RLTR10E LTR ERVK 1 308 -3 7 862 562 154 45 89 chr17 36425865 36425973 -58846678 - URR1A DNA MER1_type -39 187 77 7 862 1171 62 0 0 chr17 36426331 36426477 -58846174 - B1_Mus2 SINE Alu 0 147 2 7 862 312 264 24 5 chr17 36426621 36426721 -58845930 + PB1D10 SINE Alu 1 108 -12 7 862 38 18 0 18 chr17 36430066 36430084 -58842567 + AT_rich Low_complexity Low_complexity 1 18 0 7 862 781 265 24 9 chr17 36430084 36430297 -58842354 - B3 SINE B2 0 216 1 7 862 38 18 0 18 chr17 36430297 36430334 -58842317 + AT_rich Low_complexity Low_complexity 1 37 0 7 862 24921 24 0 0 chr17 36431054 36434578 -58838073 - L1Md_T LINE L1 0 6582 3059 7 862 268 288 0 0 chr17 36434782 36434841 -58837810 - ID_B1 SINE B4 -70 154 96 7 862 295 292 26 9 chr17 36435562 36435676 -58836975 + Charlie1a DNA MER1_type 616 731 -724 7 862 289 301 39 34 chr17 36435708 36435887 -58836764 + RLTR12A LTR ERVK 42 221 -347 7 862 225 258 70 70 chr17 36435988 36436088 -58836563 + RLTR12A LTR ERVK 367 466 -62 7 862 434 292 111 26 chr17 36436415 36436605 -58836046 - B3 SINE B2 -9 207 2 7 862 346 325 17 0 chr17 36436612 36436729 -58835922 + B1_Mur1 SINE Alu 25 143 -6 7 862 35 41 0 0 chr17 36436754 36436803 -58835848 + AT_rich Low_complexity Low_complexity 1 49 0 7 862 387 289 10 0 chr17 36436842 36436946 -58835705 + B3 SINE B2 10 114 -102 7 862 273 163 0 0 chr17 36436961 36437010 -58835641 + T-rich Low_complexity Low_complexity 1 49 0 7 862 1212 55 0 0 chr17 36437010 36437155 -58835496 - B1_Mm SINE Alu 0 147 3 7 862 235 211 0 0 chr17 36437179 36437231 -58835420 + (CAGAGA)n Simple_repeat Simple_repeat 1 52 0 8 862 213 182 0 0 chr17 36437238 36437293 -58835358 + (CA)n Simple_repeat Simple_repeat 2 56 0 8 863 797 199 0 40 chr17 36438099 36438272 -58834379 - Lx7 LINE L1 0 7696 7531 8 863 1085 177 18 23 chr17 36438281 36438501 -58834150 - RLTR18B LTR ERVK -7 505 287 8 863 2176 180 25 68 chr17 36438512 36438838 -58833813 - RLTR19 LTR ERVK -5 494 182 8 863 2099 46 103 0 chr17 36438838 36439119 -58833532 - L1_Mus1 LINE L1 0 6567 6258 8 863 2176 180 25 68 chr17 36439119 36439305 -58833346 - RLTR19 LTR ERVK -318 181 4 8 863 402 130 0 0 chr17 36439308 36439377 -58833274 - RLTR18B LTR ERVK -221 291 223 8 863 1793 215 60 11 chr17 36439396 36439843 -58832808 - Lx7 LINE L1 -1272 6424 5956 8 863 3611 200 47 29 chr17 36439844 36440717 -58831934 + RMER19B LTR ERVK 2 890 -12 8 863 2147 157 86 9 chr17 36440765 36441208 -58831443 - Lx7 LINE L1 -422 5458 4982 8 863 1148 139 15 5 chr17 36441240 36441442 -58831209 - ORR1A4 LTR MaLR -2 327 124 8 863 1046 135 16 10 chr17 36441425 36441619 -58831032 + RLTR22_Mur LTR ERVK 93 287 -1561 8 863 2734 167 70 63 chr17 36441620 36442149 -58830502 - Lx7 LINE L1 -3262 2618 2061 8 863 305 47 23 0 chr17 36442149 36442192 -58830459 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 8 863 1164 64 0 0 chr17 36442194 36442335 -58830316 - B1_Mus2 SINE Alu -6 141 1 8 863 2734 167 70 63 chr17 36442335 36442498 -58830153 - Lx7 LINE L1 -3820 2060 1918 8 863 653 134 0 18 chr17 36442498 36442612 -58830039 - B1_Mus1 SINE Alu 0 148 37 8 863 4902 187 16 78 chr17 36442612 36443033 -58829618 - Lx7 LINE L1 -3956 1924 1521 8 863 631 245 0 0 chr17 36443033 36443180 -58829471 - B1_Mus2 SINE Alu 0 147 1 8 863 4902 187 16 78 chr17 36443180 36443606 -58829045 - Lx7 LINE L1 -3956 1520 1110 8 863 210 37 0 0 chr17 36443606 36443633 -58829018 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 863 4902 205 24 26 chr17 36443633 36444434 -58828217 - Lx7 LINE L1 -6619 1109 300 8 863 318 269 38 9 chr17 36444446 36444551 -58828100 + MTE2a LTR MaLR 229 336 -43 8 863 1227 237 131 28 chr17 36444566 36444693 -58827958 - Lx9 LINE L1 0 7644 7485 8 863 198 71 0 0 chr17 36444693 36444721 -58827930 + (TG)n Simple_repeat Simple_repeat 2 29 0 8 863 464 32 16 0 chr17 36444731 36444793 -58827858 + (CA)n Simple_repeat Simple_repeat 2 64 0 8 863 1227 237 131 28 chr17 36444793 36445127 -58827524 - Lx9 LINE L1 -169 7475 7124 8 863 191 36 36 0 chr17 36445706 36445734 -58826917 + (CAAAA)n Simple_repeat Simple_repeat 5 33 0 8 863 338 273 138 69 chr17 36445884 36446116 -58826535 + LTR41 LTR ERVL 63 310 -458 8 863 549 295 76 40 chr17 36446260 36446511 -58826140 + MTEa LTR MaLR 1 260 -119 8 863 3546 218 73 11 chr17 36446526 36447436 -58825215 + RMER19B LTR ERVK 1 902 0 8 863 898 162 217 36 chr17 36447459 36447708 -58824943 - RLTR26 LTR ERVK 0 642 349 8 863 355 133 0 51 chr17 36447708 36447787 -58824864 - L1Md_F2 LINE L1 0 6582 6508 8 863 5830 72 4 1 chr17 36447792 36448717 -58823934 - L1_Mus1 LINE L1 -247 6320 5394 8 863 3718 64 0 0 chr17 36448717 36449169 -58823482 + L1_Mus1 LINE L1 6116 6567 0 8 863 5381 78 101 7 chr17 36449264 36450017 -58822634 - L1_Mus3 LINE L1 0 6638 5815 8 863 1279 243 14 17 chr17 36450023 36450379 -58822272 + RLTR11A2 LTR ERVK 158 512 -15 8 863 789 250 14 5 chr17 36450500 36450717 -58821934 + RLTR14 LTR ERV1 12 230 -152 8 863 216 67 0 0 chr17 36450718 36450748 -58821903 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 863 247 229 10 20 chr17 36450972 36451070 -58821581 + (TATATG)n Simple_repeat Simple_repeat 5 101 0 8 863 349 247 10 174 chr17 36451355 36451551 -58821100 + RNLTR23 LTR ERVK 479 642 0 8 863 1125 229 24 12 chr17 36451789 36452041 -58820610 + RNERVK23-int LTR ERVK 217 471 -7746 8 863 376 355 80 12 chr17 36452278 36452614 -58820037 + RNERVK23-int LTR ERVK 693 1051 -7166 8 863 6539 239 21 18 chr17 36453035 36454549 -58818102 + RNERVK23-int LTR ERVK 4443 5961 -2256 8 863 1661 237 3 17 chr17 36454551 36454911 -58817740 + RNERVK23-int LTR ERVK 7460 7814 -403 8 863 278 234 10 96 chr17 36455055 36455159 -58817492 + ETnERV2-int LTR ERVK 6750 6844 -562 8 863 409 267 11 75 chr17 36455634 36455808 -58816843 + RNLTR23 LTR ERVK 480 642 0 8 863 715 277 94 31 chr17 36455808 36456127 -58816524 - MT2B LTR ERVL -47 554 85 8 863 2942 243 109 63 chr17 36456263 36457484 -58815167 + RMER1A Other Other 15 1029 -1 8 863 347 157 14 0 chr17 36457511 36457581 -58815070 + GA-rich Low_complexity Low_complexity 1 71 0 8 863 486 275 75 23 chr17 36458108 36458270 -58814381 + B3A SINE B2 2 166 -29 8 863 608 67 11 0 chr17 36458329 36458419 -58814232 + (CA)n Simple_repeat Simple_repeat 2 92 0 8 863 698 289 0 32 chr17 36458488 36458674 -58813977 + B3 SINE B2 30 209 -7 8 863 966 144 37 0 chr17 36458867 36459104 -58813547 + RMER6D LTR ERVK 1 284 -472 8 863 376 307 0 0 chr17 36459125 36459213 -58813438 + B3 SINE B2 26 113 -103 8 863 2470 183 63 9 chr17 36459196 36459737 -58812914 + RMER6D LTR ERVK 151 720 0 8 863 261 370 0 7 chr17 36463377 36463516 -58809135 - Charlie1a DNA MER1_type 0 1455 1318 8 863 445 304 6 36 chr17 36463768 36463935 -58808716 - B3A SINE B2 -10 188 27 8 863 421 262 38 15 chr17 36463945 36464077 -58808574 - B1_Mur1 SINE Alu -5 144 10 8 863 226 324 27 27 chr17 36464268 36464417 -58808234 - Charlie1a DNA MER1_type -695 760 612 8 863 544 182 51 0 chr17 36464988 36465125 -58807526 - URR1B DNA MER1_type 0 225 82 8 863 212 265 28 56 chr17 36465393 36465465 -58807186 + B1_Mus1 SINE Alu 6 75 -73 8 863 5124 50 22 0 chr17 36465615 36466251 -58806400 - L1Md_F3 LINE L1 -1 6583 5934 8 863 8397 70 15 8 chr17 36467051 36468309 -58804342 - L1_Mus2 LINE L1 -1 6565 5300 8 863 975 137 0 0 chr17 36468309 36468455 -58804196 - B1_Mus1 SINE Alu -1 147 2 8 863 8397 98 6 30 chr17 36468455 36469097 -58803554 - L1_Mus2 LINE L1 -584 5299 4677 8 863 911 57 0 8 chr17 36469097 36469220 -58803431 + (TTTC)n Simple_repeat Simple_repeat 2 123 0 8 863 8397 98 6 30 chr17 36469220 36469233 -58803418 - L1_Mus2 LINE L1 -1207 4676 4668 8 863 28761 102 10 9 chr17 36469225 36474219 -58798432 - L1_Mus1 LINE L1 0 6567 1570 8 863 761 275 24 5 chr17 36475676 36475888 -58796763 - B3 SINE B2 0 216 1 8 863 2286 125 112 46 chr17 36476119 36476513 -58796138 - RLTR9B2 LTR ERVK 0 420 1 8 863 273 271 0 0 chr17 36477063 36477122 -58795529 - ID_B1 SINE B4 -70 154 96 8 863 2446 56 0 3 chr17 36477987 36478290 -58794361 - L1_Mus1 LINE L1 0 6567 6266 8 863 275 315 37 32 chr17 36478311 36478498 -58794153 + RLTR12A LTR ERVK 42 229 -339 8 863 476 16 0 16 chr17 36478507 36478569 -58794082 + (TG)n Simple_repeat Simple_repeat 1 61 0 8 863 532 276 113 0 chr17 36479067 36479252 -58793399 - B3 SINE B2 -9 207 2 8 863 332 302 21 0 chr17 36479259 36479355 -58793296 + B1_Mur1 SINE Alu 25 122 -27 8 863 1898 169 31 31 chr17 36479355 36479745 -58792906 - RLTR19 LTR ERVK -106 393 4 8 863 390 130 0 0 chr17 36479748 36479817 -58792834 - RLTR18B LTR ERVK -221 291 223 8 863 1628 211 61 17 chr17 36479836 36480246 -58792405 - Lx7 LINE L1 -1272 6424 5997 8 863 1004 268 51 10 chr17 36480259 36480553 -58792098 + RMER19B LTR ERVK 138 443 -459 8 863 39825 36 12 3 chr17 36480553 36486610 -58786041 - L1Md_A LINE L1 -1 6581 466 8 863 1941 195 61 11 chr17 36486631 36486713 -58785938 + RMER19B LTR ERVK 429 508 -394 8 863 234 0 0 0 chr17 36486713 36486739 -58785912 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 8 863 1941 195 61 11 chr17 36486739 36487096 -58785555 + RMER19B LTR ERVK 509 890 -12 8 863 2282 156 78 9 chr17 36487143 36487589 -58785062 - Lx7 LINE L1 -422 5458 4982 8 863 1214 136 0 5 chr17 36487618 36487818 -58784833 - ORR1A3 LTR MaLR -2 324 126 8 863 1117 86 17 11 chr17 36487802 36487979 -58784672 + RLTR22_Mur LTR ERVK 97 274 -1574 8 863 957 100 43 0 chr17 36487987 36488127 -58784524 - B1_Mm SINE Alu 0 147 2 8 863 3057 221 39 151 chr17 36488155 36488661 -58783990 - Lx7 LINE L1 -3269 2608 2093 8 863 1154 68 0 14 chr17 36488661 36488809 -58783842 - B1_Mus2 SINE Alu 0 147 2 8 863 3203 189 23 102 chr17 36488809 36489010 -58783641 - Lx7 LINE L1 -3785 2092 1910 8 863 714 107 0 0 chr17 36489010 36489122 -58783529 - B1_Mus1 SINE Alu 0 148 37 8 863 3203 189 23 102 chr17 36489122 36489547 -58783104 - Lx7 LINE L1 -3785 1909 1521 8 863 747 196 14 0 chr17 36489547 36489695 -58782956 - B1_Mur4 SINE Alu 0 150 1 8 863 4418 198 27 52 chr17 36489695 36490935 -58781716 - Lx7 LINE L1 -4360 1520 300 8 863 311 261 8 11 chr17 36490948 36491051 -58781600 + MTD LTR MaLR 230 375 -44 8 863 1545 233 67 83 chr17 36491075 36491631 -58781020 - Lx9 LINE L1 -9 7635 7089 8 863 191 36 36 0 chr17 36492182 36492210 -58780441 + (CAAAA)n Simple_repeat Simple_repeat 5 33 0 8 863 334 299 180 25 chr17 36492355 36492633 -58780018 + LTR41 LTR ERVL 58 378 -390 8 863 599 280 100 37 chr17 36492751 36492992 -58779659 + MTEa LTR MaLR 1 256 -123 8 863 3609 199 84 26 chr17 36493008 36493931 -58778720 + RMER19B LTR ERVK 1 902 0 8 863 335 315 39 0 chr17 36493931 36494054 -58778597 + MTEa LTR MaLR 249 376 -3 8 863 240 163 20 0 chr17 36494242 36494291 -58778360 - B3A SINE B2 -148 50 1 8 863 269 303 33 11 chr17 36494336 36494426 -58778225 - ID_B1 SINE B4 -130 94 3 8 863 549 234 24 0 chr17 36494583 36494707 -58777944 - B3 SINE B2 0 216 90 8 863 1239 206 90 6 chr17 36494725 36495037 -58777614 - RLTR30 LTR ERV1 -37 342 5 8 863 424 217 22 0 chr17 36495039 36495131 -58777520 - B3 SINE B2 -122 94 1 8 863 546 286 58 69 chr17 36495249 36495610 -58777041 - Lx9 LINE L1 -14 7630 7274 8 863 391 306 114 50 chr17 36495643 36495863 -58776788 - Lx9 LINE L1 -452 7192 6959 8 863 1738 188 11 11 chr17 36496025 36496381 -58776270 - RLTR15 LTR ERVK 0 359 4 8 863 23 33 0 0 chr17 36497270 36497300 -58775351 + AT_rich Low_complexity Low_complexity 1 30 0 8 863 445 202 26 68 chr17 36497300 36497417 -58775234 - B1_Mur2 SINE Alu -16 133 22 8 863 1765 229 29 50 chr17 36497422 36497945 -58774706 + RLTR11A2 LTR ERVK 1 512 -15 8 863 811 235 20 57 chr17 36498071 36498315 -58774336 + RLTR14 LTR ERV1 15 249 -133 8 863 348 176 0 0 chr17 36498540 36498608 -58774043 + (TG)n Simple_repeat Simple_repeat 1 68 0 8 863 562 246 30 44 chr17 36498609 36498900 -58773751 - MT2B LTR ERVL -50 551 283 8 863 2286 255 103 76 chr17 36499011 36500000 -58772651 + RMER1A Other Other 2 754 -276 8 863 992 194 92 4 chr17 36500000 36500228 -58772423 + RMER1B Other Other 817 1064 -2 1 863 552 30 0 0 chr17 36500255 36500321 -58772330 + (GGA)n Simple_repeat Simple_repeat 2 67 0 2 863 180 125 0 0 chr17 36500321 36500353 -58772298 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3 863 486 275 75 23 chr17 36500910 36501072 -58771579 + B3A SINE B2 2 166 -29 4 863 443 73 15 0 chr17 36501131 36501199 -58771452 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 863 376 307 0 0 chr17 36501255 36501343 -58771308 + B3 SINE B2 26 113 -103 6 863 2413 195 47 16 chr17 36501326 36501879 -58770772 + RMER6D LTR ERVK 151 720 0 7 863 447 101 43 43 chr17 36502661 36502754 -58769897 - L1Md_F2 LINE L1 -1 6581 6489 8 863 423 0 0 0 chr17 36505960 36506007 -58766644 + (TA)n Simple_repeat Simple_repeat 2 48 0 9 863 470 294 12 6 chr17 36506067 36506238 -58766413 - B3A SINE B2 0 198 27 1 863 477 231 38 15 chr17 36506248 36506380 -58766271 - B1_Mur1 SINE Alu -5 144 10 1 863 588 168 51 0 chr17 36507198 36507335 -58765316 - URR1B DNA MER1_type 0 225 82 1 863 600 178 1 10 chr17 36509085 36509205 -58763446 - L1_Mus2 LINE L1 -72 6495 6376 1 863 1068 110 9 169 chr17 36511161 36511380 -58761271 + B2_Mm1t SINE B2 3 186 -7 1 863 23 0 0 0 chr17 36511387 36511410 -58761241 + AT_rich Low_complexity Low_complexity 1 23 0 1 863 496 299 73 6 chr17 36511565 36511743 -58760908 - B3 SINE B2 0 216 27 1 863 213 39 0 0 chr17 36511743 36511769 -58760882 + (T)n Simple_repeat Simple_repeat 1 26 0 1 863 5317 79 0 1 chr17 36512295 36512980 -58759671 - L1_Mus2 LINE L1 -1 6565 5882 1 863 263 283 0 0 chr17 36513450 36513510 -58759141 - ID_B1 SINE B4 -69 155 96 1 863 288 294 40 34 chr17 36514191 36514339 -58758312 + Charlie1a DNA MER1_type 619 767 -688 2 863 377 290 72 60 chr17 36514293 36514528 -58758123 + RLTR12B LTR ERVK 12 249 -279 2 863 1149 61 0 26 chr17 36514849 36515000 -58757651 - B1_Mm SINE Alu 0 147 1 2 863 519 249 13 31 chr17 36515224 36515388 -58757263 - B3 SINE B2 -34 159 2 2 863 10484 24 0 0 chr17 36515465 36517343 -58755308 - L1Md_A LINE L1 0 6582 4704 2 863 8534 18 4 0 chr17 36517344 36518323 -58754328 + L1Md_A LINE L1 3721 4703 -1180 2 863 50 42 0 0 chr17 36518397 36518468 -58754183 + AT_rich Low_complexity Low_complexity 1 71 0 2 863 343 298 29 0 chr17 36518501 36518605 -58754046 + B3A SINE B2 10 116 -82 2 863 321 227 0 0 chr17 36518681 36518791 -58753860 + (CAGAGA)n Simple_repeat Simple_repeat 6 115 0 2 863 255 79 0 0 chr17 36518793 36518831 -58753820 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 863 254 272 58 10 chr17 36519111 36519215 -58753436 + Charlie1a DNA MER1_type 1347 1455 0 2 863 775 205 0 40 chr17 36519643 36519816 -58752835 - Lx7 LINE L1 0 7696 7531 2 863 683 160 15 8 chr17 36519853 36519985 -58752666 - RLTR18B LTR ERVK -93 419 287 3 863 1313 203 47 30 chr17 36519996 36520296 -58752355 - RLTR19 LTR ERVK -5 494 190 3 863 341 243 90 28 chr17 36520311 36520455 -58752196 - Lx7 LINE L1 -1538 6158 6006 2 863 4109 189 53 3 chr17 36520499 36521347 -58751304 + RMER19B LTR ERVK 1 890 -12 3 863 596 134 10 0 chr17 36521362 36521459 -58751192 - Lx7 LINE L1 -422 5458 5361 2 863 1130 49 0 0 chr17 36521459 36521603 -58751048 - B2_Mm2 SINE B2 -48 147 4 3 863 343 285 176 18 chr17 36521890 36522162 -58750489 + LTR41 LTR ERVL 64 378 -390 3 863 207 69 0 0 chr17 36522238 36522267 -58750384 + (CAAT)n Simple_repeat Simple_repeat 2 30 0 3 863 487 292 80 111 chr17 36522295 36522554 -58750097 + MTEa LTR MaLR 1 264 -115 3 863 3773 205 45 78 chr17 36522554 36523487 -58749164 + RMER19B LTR ERVK 1 902 0 3 863 487 292 80 111 chr17 36523487 36523551 -58749100 + MTEa LTR MaLR 265 314 -65 3 863 1200 81 0 6 chr17 36523553 36523728 -58748923 - B2_Mm2 SINE B2 -20 175 2 3 863 232 222 0 0 chr17 36523967 36524012 -58748639 - B3A SINE B2 -153 45 1 3 863 234 0 0 0 chr17 36524024 36524050 -58748601 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 863 369 247 23 12 chr17 36524072 36524158 -58748493 - ID_B1 SINE B4 -130 94 8 4 863 21 0 0 0 chr17 36524296 36524317 -58748334 + AT_rich Low_complexity Low_complexity 1 21 0 4 863 244 271 167 0 chr17 36524317 36524413 -58748238 - B3A SINE B2 -60 138 27 4 863 517 197 40 16 chr17 36524417 36524541 -58748110 - B1_Mur1 SINE Alu -1 148 22 4 863 593 197 166 0 chr17 36525481 36525674 -58746977 - URR1B DNA MER1_type 0 225 1 4 863 678 246 42 24 chr17 36529473 36529685 -58742966 - B3 SINE B2 0 216 1 4 863 425 110 14 0 chr17 36530244 36530317 -58742334 + (CAAA)n Simple_repeat Simple_repeat 2 75 0 4 863 21 0 0 0 chr17 36530325 36530346 -58742305 + AT_rich Low_complexity Low_complexity 1 21 0 4 863 214 233 0 0 chr17 36530658 36530701 -58741950 - B1F2 SINE Alu -92 57 15 4 863 5003 107 25 104 chr17 36530936 36531559 -58741092 - L1_Mus3 LINE L1 -1 6637 6012 5 863 1188 55 0 0 chr17 36531559 36531705 -58740946 - B1_Mus1 SINE Alu -1 147 2 5 863 5003 107 25 104 chr17 36531705 36531985 -58740666 - L1_Mus3 LINE L1 -627 6011 5805 5 863 181 0 69 0 chr17 36531985 36532014 -58740637 + (TTTTA)n Simple_repeat Simple_repeat 1 31 0 5 863 235 35 0 0 chr17 36534121 36534150 -58738501 - U6 snRNA snRNA -78 29 1 5 863 2272 59 0 14 chr17 36535946 36536239 -58736412 - L1Md_F2 LINE L1 0 6582 6294 5 863 35973 65 13 10 chr17 36536239 36542428 -58730223 - L1Md_F2 LINE L1 -9 6573 363 5 863 6694 131 7 119 chr17 36542429 36542953 -58729698 - L1_Mus3 LINE L1 -70 5813 5293 5 863 198 0 0 0 chr17 36542953 36542975 -58729676 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 5 863 6694 131 7 119 chr17 36542975 36543133 -58729518 - L1_Mus3 LINE L1 -591 5292 5249 5 863 3296 60 0 0 chr17 36543133 36543548 -58729103 - L1Md_F2 LINE L1 0 6582 6168 5 863 6694 131 7 119 chr17 36543548 36544258 -58728393 - L1_Mus3 LINE L1 -635 5248 4577 5 863 792 152 15 0 chr17 36544259 36544391 -58728260 + L1Md_F LINE L1 252 385 -6134 5 863 4939 44 2 0 chr17 36547163 36547753 -58724898 - L1Md_F3 LINE L1 0 6584 5994 5 863 373 310 32 16 chr17 36547768 36547955 -58724696 - B3A SINE B2 0 198 9 6 863 477 248 23 0 chr17 36547949 36548078 -58724573 - B1_Mur2 SINE Alu -5 144 13 6 863 599 194 41 20 chr17 36549004 36549151 -58723500 - URR1A DNA MER1_type 0 226 77 6 863 270 303 0 0 chr17 36549623 36549699 -58722952 + PB1D10 SINE Alu 1 76 -41 6 863 359 355 47 16 chr17 36553924 36554116 -58718535 + B3A SINE B2 1 198 0 6 863 298 280 4 19 chr17 36554179 36554296 -58718355 + ORR1D2 LTR MaLR 1 118 -241 6 863 807 147 135 42 chr17 36554529 36554721 -58717930 + RMER19B LTR ERVK 308 517 -385 6 863 409 245 94 50 chr17 36554787 36555072 -58717579 + Lx8 LINE L1 5717 6012 -1684 6 863 570 217 22 7 chr17 36555202 36555341 -58717310 + B1_Mur1 SINE Alu 7 147 -2 6 863 212 292 97 30 chr17 36555401 36555535 -58717116 + B2_Mm2 SINE B2 5 147 -48 6 863 1136 88 0 0 chr17 36555823 36555970 -58716681 - B1_Mus1 SINE Alu 0 148 2 7 863 222 37 0 0 chr17 36556067 36556094 -58716557 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 7 863 5905 184 42 16 chr17 36556094 36557550 -58715101 - Lx4B LINE L1 -31 6969 5424 7 863 2784 122 10 51 chr17 36558429 36558937 -58713714 - RLTR1C LTR ERV1 -16 487 1 7 863 1568 155 34 17 chr17 36558949 36559245 -58713406 + ORR1A4 LTR MaLR 29 329 0 7 863 750 125 7 52 chr17 36559312 36559447 -58713204 - MTB_Mm LTR MaLR 0 396 268 7 863 865 61 0 0 chr17 36559441 36559555 -58713096 - MTB_Mm LTR MaLR -293 114 1 7 863 22 0 0 0 chr17 36559703 36559725 -58712926 + AT_rich Low_complexity Low_complexity 1 22 0 7 863 1024 145 49 22 chr17 36560252 36560435 -58712216 + B2_Mm2 SINE B2 1 188 -7 7 863 180 0 0 0 chr17 36560622 36560642 -58712009 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 7 863 1122 81 12 0 chr17 36560644 36560805 -58711846 - B2_Mm2 SINE B2 -30 165 3 7 863 247 241 0 17 chr17 36560806 36560865 -58711786 + PB1D9 SINE Alu 12 69 -51 8 863 308 328 66 6 chr17 36563632 36563813 -58708838 + L1MC LINE L1 2556 2747 -3399 8 863 603 261 15 149 chr17 36564341 36564670 -58707981 + RLTR11B LTR ERVK 1 285 -168 8 863 288 331 20 47 chr17 36564720 36564869 -58707782 + RLTR11B LTR ERVK 284 428 -25 8 863 8565 28 2 0 chr17 36565145 36566233 -58706418 - L1Md_T LINE L1 -1 6581 5491 8 863 428 257 26 9 chr17 36567285 36567399 -58705252 - ORR1E LTR MaLR -237 122 7 8 863 1150 233 131 3 chr17 36567412 36567748 -58704903 + MTD LTR MaLR 6 384 -35 8 863 247 25 0 48 chr17 36567755 36567797 -58704854 + (TTTTTG)n Simple_repeat Simple_repeat 6 45 0 8 863 296 359 19 71 chr17 36567894 36567925 -58704726 - B3 SINE B2 -17 199 171 8 863 513 0 0 0 chr17 36567925 36567982 -58704669 + (TC)n Simple_repeat Simple_repeat 2 58 0 8 863 249 98 0 0 chr17 36567982 36568022 -58704629 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 863 355 337 19 49 chr17 36568022 36568199 -58704452 - B3A SINE B2 -46 170 1 8 864 315 71 0 0 chr17 36569582 36569624 -58703027 + (CA)n Simple_repeat Simple_repeat 1 42 0 9 864 390 91 0 0 chr17 36569624 36569679 -58702972 + (TA)n Simple_repeat Simple_repeat 1 55 0 9 864 435 185 0 0 chr17 36569692 36569784 -58702867 + GA-rich Low_complexity Low_complexity 3 94 0 9 864 290 242 9 108 chr17 36570953 36571015 -58701636 - B1_Mur4 SINE Alu -41 109 52 9 864 978 39 0 0 chr17 36571015 36571143 -58701508 - L1Md_T LINE L1 -1 6581 6454 9 864 290 242 9 108 chr17 36571143 36571191 -58701460 - B1_Mur4 SINE Alu -99 51 10 9 864 243 0 0 0 chr17 36572245 36572272 -58700379 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 9 864 236 85 0 41 chr17 36572301 36572350 -58700301 + (CAAAAA)n Simple_repeat Simple_repeat 1 47 0 9 864 7421 59 13 5 chr17 36573216 36574174 -58698477 - L1Md_F2 LINE L1 0 6582 5652 9 864 387 0 0 0 chr17 36574334 36574377 -58698274 + (CAGGT)n Simple_repeat Simple_repeat 2 44 0 9 864 1171 139 9 24 chr17 36574456 36574669 -58697982 + RLTR15 LTR ERVK 143 352 -7 9 864 17409 96 4 3 chr17 36574943 36578131 -58694520 + L1_Mus2 LINE L1 3376 6566 0 1 864 624 205 37 49 chr17 36578159 36578323 -58694328 + Lx3A LINE L1 6820 6981 0 1 864 21 0 0 0 chr17 36578324 36578345 -58694306 + AT_rich Low_complexity Low_complexity 1 21 0 1 864 273 58 19 37 chr17 36578364 36578418 -58694233 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 1 864 1678 251 59 18 chr17 36578715 36579227 -58693424 + RLTR20B3 LTR ERVK 1 533 -44 1 864 237 305 56 19 chr17 36579905 36580012 -58692639 - ORR1E LTR MaLR -238 121 11 1 864 754 224 0 22 chr17 36581741 36581919 -58690732 - ORR1A4 LTR MaLR -65 264 91 1 864 753 201 0 41 chr17 36582036 36582207 -58690444 - Lx7 LINE L1 -2 7694 7531 1 864 1004 153 117 5 chr17 36582216 36582413 -58690238 - RLTR18B LTR ERVK -7 505 287 1 864 26090 104 14 1 chr17 36582433 36586946 -58685705 + L1Md_F LINE L1 380 4950 -933 1 864 530 264 194 32 chr17 36587056 36587563 -58685088 - Lx9 LINE L1 -97 7547 6959 1 864 1465 160 50 10 chr17 36587740 36588037 -58684614 - RLTR15 LTR ERVK 0 359 51 1 864 315 303 48 0 chr17 36588090 36588235 -58684416 - B3 SINE B2 -2 214 63 1 864 278 354 23 38 chr17 36588331 36588463 -58684188 + B3A SINE B2 42 171 -27 1 864 3788 73 47 4 chr17 36588710 36589220 -58683431 + L1Md_F2 LINE L1 6051 6582 0 1 864 417 187 0 62 chr17 36591262 36591359 -58681292 - B1_Mur3 SINE Alu -37 112 22 1 864 1715 245 33 53 chr17 36591364 36591876 -58680775 + RLTR11A2 LTR ERVK 1 502 -25 1 864 3290 51 5 0 chr17 36591984 36592378 -58680273 - MTA_Mm LTR MaLR 0 396 1 1 864 726 287 14 0 chr17 36592409 36592625 -58680026 + RLTR14 LTR ERV1 12 230 -152 1 864 200 273 15 0 chr17 36592871 36592937 -58679714 + (TATG)n Simple_repeat Simple_repeat 1 67 0 1 864 828 204 221 32 chr17 36592946 36593285 -58679366 - MT2A LTR ERVL -46 487 85 1 864 710 204 7 7 chr17 36593439 36593577 -58679074 + RMER1B Other Other 52 189 -877 1 864 1001 129 14 56 chr17 36593586 36593800 -58678851 - RMER17D LTR ERVK 0 889 685 1 864 425 312 85 24 chr17 36593913 36594077 -58678574 + B3A SINE B2 2 175 -23 1 864 191 152 22 0 chr17 36594146 36594192 -58678459 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 864 575 301 68 23 chr17 36594243 36594420 -58678231 + B3 SINE B2 26 210 -6 1 864 2907 173 123 17 chr17 36594613 36594725 -58677926 + RMER6D LTR ERVK 1 157 -563 1 864 2053 169 94 45 chr17 36594725 36595258 -58677393 - RLTR31_Mm LTR ERVK 0 561 3 1 864 2907 173 123 17 chr17 36595258 36595796 -58676855 + RMER6D LTR ERVK 158 720 0 1 864 233 376 17 17 chr17 36599563 36599682 -58672969 - Charlie1 DNA MER1_type 0 2781 2663 1 864 482 291 35 29 chr17 36599956 36600126 -58672525 - B3A SINE B2 0 198 28 1 864 503 223 21 28 chr17 36600140 36600283 -58672368 - B1_Mur1 SINE Alu 0 149 8 1 864 611 153 45 15 chr17 36601150 36601283 -58671368 - URR1B DNA MER1_type 0 225 89 1 864 27 0 0 0 chr17 36601503 36601530 -58671121 + AT_rich Low_complexity Low_complexity 1 27 0 1 864 254 233 178 0 chr17 36601553 36601626 -58671025 + PB1D10 SINE Alu 1 86 -31 1 864 1457 58 21 0 chr17 36604139 36604327 -58668324 + B2_Mm1t SINE B2 1 192 -1 1 864 301 55 0 68 chr17 36604473 36604532 -58668119 + L1Md_F2 LINE L1 6527 6581 -1 1 864 478 286 41 59 chr17 36605100 36605319 -58667332 - B3 SINE B2 0 216 2 1 864 1978 76 11 14 chr17 36605401 36605680 -58666971 - L1Md_F2 LINE L1 -7 6575 6298 1 864 188 35 35 0 chr17 36606214 36606243 -58666408 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1 864 262 250 0 0 chr17 36606579 36606635 -58666016 - ID_B1 SINE B4 -70 154 99 1 864 633 275 93 0 chr17 36608210 36608392 -58664259 - B3 SINE B2 -16 200 2 1 864 386 323 16 0 chr17 36608401 36608525 -58664126 + B1_Mur1 SINE Alu 21 146 -3 1 864 45 48 0 12 chr17 36608533 36608580 -58664071 + AT_rich Low_complexity Low_complexity 1 47 0 1 864 4912 65 2 2 chr17 36608580 36609197 -58663454 + L1Md_F2 LINE L1 5961 6577 -5 1 864 45 48 0 12 chr17 36609197 36609233 -58663418 + AT_rich Low_complexity Low_complexity 1 36 0 1 864 366 297 9 0 chr17 36609244 36609355 -58663296 + B3 SINE B2 3 114 -102 1 864 191 116 0 44 chr17 36609433 36609478 -58663173 + (CAGAGA)n Simple_repeat Simple_repeat 2 44 0 1 864 252 274 0 0 chr17 36609479 36609552 -58663099 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 864 235 254 61 38 chr17 36609786 36609917 -58662734 + Charlie1a DNA MER1_type 1322 1455 0 1 864 1071 72 7 0 chr17 36610418 36610556 -58662095 - B1_Mus1 SINE Alu -9 139 1 1 864 4536 12 0 0 chr17 36611048 36611541 -58661110 - MT2_Mm LTR ERVL 0 493 1 1 864 321 0 0 0 chr17 36611541 36611579 -58661072 - MERVL-int LTR ERVL 0 5485 5448 1 864 331 191 46 35 chr17 36611579 36611666 -58660985 - ORR1A3-int LTR MaLR -1323 640 553 1 864 48470 14 6 0 chr17 36611666 36616992 -58655659 - MERVL-int LTR ERVL -125 5360 1 1 864 4536 12 0 0 chr17 36616992 36617485 -58655166 - MT2_Mm LTR ERVL 0 493 1 1 864 3650 199 32 25 chr17 36617489 36618236 -58654415 + RLTR14-int LTR ERV1 3173 3924 -1393 1 864 3082 102 0 16 chr17 36618242 36618682 -58653969 + L1_Mus4 LINE L1 5962 6394 -242 1 864 38 0 0 0 chr17 36619925 36619963 -58652688 + AT_rich Low_complexity Low_complexity 1 38 0 1 864 2441 199 14 14 chr17 36619973 36620478 -58652173 - RLTR16 LTR ERVK 0 505 1 1 864 3157 154 52 11 chr17 36620508 36621146 -58651505 - MYSERV16_I-int LTR ERVK -17 2309 1646 1 864 1094 198 118 0 chr17 36621182 36621588 -58651063 - RLTR14-int LTR ERV1 -460 4857 4404 1 864 5972 9 0 5 chr17 36621899 36622595 -58650056 - L1Md_T LINE L1 0 6582 5922 1 864 1390 214 50 20 chr17 36622619 36622920 -58649731 - RLTR14-int LTR ERV1 -1031 4286 3977 1 864 1693 52 0 5 chr17 36622920 36623132 -58649519 - L1_Mus3 LINE L1 -681 5957 5747 1 864 396 284 0 27 chr17 36623185 36623297 -58649354 + B1_Mur1 SINE Alu 34 142 -7 1 864 269 254 0 47 chr17 36623533 36623661 -58648990 + G-rich Low_complexity Low_complexity 3 124 0 1 864 377 279 0 32 chr17 36624011 36624137 -58648514 - ID_B1 SINE B4 0 224 103 1 864 2104 234 88 93 chr17 36624418 36624503 -58648148 + L1Md_F3 LINE L1 222 294 -6347 1 864 3916 48 0 8 chr17 36624503 36624987 -58647664 - L1Md_F2 LINE L1 -12 6570 6091 1 864 35943 66 17 7 chr17 36624987 36630275 -58642376 + L1Md_F3 LINE L1 295 5589 -297 1 864 7850 55 15 1 chr17 36630275 36631259 -58641392 + L1Md_F3 LINE L1 5590 6587 0 1 864 4316 146 111 17 chr17 36631336 36631769 -58640882 - RMER17B LTR ERVK 0 958 462 1 864 5456 117 18 24 chr17 36631769 36632661 -58639990 + RMER17D LTR ERVK 1 887 -2 1 864 4316 146 111 17 chr17 36632661 36633103 -58639548 - RMER17B LTR ERVK -497 461 1 1 864 234 192 19 0 chr17 36633104 36633156 -58639495 - B3 SINE B2 -3 213 161 1 864 242 211 0 0 chr17 36633204 36633256 -58639395 - B3A SINE B2 -143 55 4 1 864 231 247 0 0 chr17 36633272 36633361 -58639290 + CT-rich Low_complexity Low_complexity 1 89 0 1 864 199 174 28 28 chr17 36633427 36633498 -58639153 + (TCTCTG)n Simple_repeat Simple_repeat 2 72 0 1 864 672 102 0 0 chr17 36634589 36634687 -58637964 + (TTTTC)n Simple_repeat Simple_repeat 2 99 0 1 864 291 268 15 102 chr17 36634966 36635103 -58637548 + B2_Mm2 SINE B2 1 125 -70 1 864 351 0 0 0 chr17 36635136 36635175 -58637476 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 864 1110 211 149 12 chr17 36635271 36635626 -58637025 - MTD LTR MaLR -18 401 10 1 864 417 174 46 11 chr17 36635640 36635727 -58636924 + ORR1E LTR MaLR 6 95 -264 1 864 242 351 7 7 chr17 36636591 36636726 -58635925 - Charlie1a DNA MER1_type -2 1453 1319 1 864 342 264 18 26 chr17 36637129 36637242 -58635409 - RLTR11B LTR ERVK -58 395 284 1 864 414 0 0 0 chr17 36638280 36638326 -58634325 + (GA)n Simple_repeat Simple_repeat 2 47 0 1 864 288 287 55 110 chr17 36640335 36640480 -58632171 - B3A SINE B2 -16 182 46 1 864 1395 190 7 11 chr17 36640818 36641090 -58631561 - ORR1A4 LTR MaLR -3 326 56 1 864 367 297 68 20 chr17 36641650 36641852 -58630799 + RLTR12B LTR ERVK 23 229 -339 1 864 307 276 57 38 chr17 36641961 36642119 -58630532 + RLTR12B LTR ERVK 367 527 -1 1 864 632 260 144 0 chr17 36642410 36642583 -58630068 - B3 SINE B2 -16 200 3 1 864 424 276 16 39 chr17 36642593 36642710 -58629941 + B1_Mur1 SINE Alu 21 138 -11 1 864 185 0 40 0 chr17 36642710 36642735 -58629916 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1 864 48 67 0 0 chr17 36642762 36642852 -58629799 + AT_rich Low_complexity Low_complexity 1 90 0 1 864 347 328 0 9 chr17 36642860 36642974 -58629677 + B3A SINE B2 3 115 -83 1 864 287 68 68 0 chr17 36643092 36643151 -58629500 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 864 259 281 39 10 chr17 36643391 36643495 -58629156 + Charlie1b DNA MER1_type 417 523 0 1 864 469 152 8 41 chr17 36644175 36644298 -58628353 + (CAGAGA)n Simple_repeat Simple_repeat 3 121 0 1 864 692 279 18 44 chr17 36644458 36644687 -58627964 + ORR1D1 LTR MaLR 1 223 -151 1 864 1992 134 3 30 chr17 36645305 36645644 -58627007 + Lx LINE L1 6321 6650 -4 1 864 262 246 89 16 chr17 36647107 36647231 -58625420 - Charlie1a DNA MER1_type 0 1455 1323 1 864 2129 109 6 15 chr17 36647672 36647999 -58624652 + L1_Mus3 LINE L1 6314 6637 -1 1 864 1357 251 50 88 chr17 36648409 36648946 -58623705 + RLTR11A LTR ERVK 1 517 -11 1 864 721 299 24 0 chr17 36649471 36649682 -58622969 + B3 SINE B2 1 216 0 1 864 477 34 0 0 chr17 36651246 36651305 -58621346 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 864 1182 224 115 18 chr17 36651395 36651769 -58620882 - MTD LTR MaLR -14 405 3 1 864 326 304 18 0 chr17 36651781 36651893 -58620758 + ORR1E LTR MaLR 9 122 -237 1 864 46 33 0 0 chr17 36652328 36652388 -58620263 + AT_rich Low_complexity Low_complexity 1 60 0 1 864 239 328 34 17 chr17 36652417 36652535 -58620116 - B1_Mur1 SINE Alu 0 149 30 1 864 2445 101 108 0 chr17 36652536 36652914 -58619737 + Lx3C LINE L1 6100 6518 -458 1 864 230 370 11 17 chr17 36653012 36653188 -58619463 - Charlie1a DNA MER1_type -669 786 612 1 864 336 269 29 0 chr17 36654003 36654107 -58618544 - ORR1D2 LTR MaLR -258 112 6 2 864 465 291 52 28 chr17 36654107 36654319 -58618332 + MTD LTR MaLR 1 217 -202 2 864 937 224 98 120 chr17 36654319 36654770 -58617881 + RMER10A LTR ERVL 1 441 -1 2 864 611 144 75 15 chr17 36655061 36655195 -58617456 - Lx LINE L1 0 6654 6513 2 864 1048 157 19 9 chr17 36655822 36656034 -58616617 - RMER6A LTR ERVK -7 749 536 2 864 442 222 9 44 chr17 36656051 36656164 -58616487 - MT2B LTR ERVL -342 259 151 2 864 533 124 144 0 chr17 36656114 36656211 -58616440 - RMER6A LTR ERVK -579 111 1 2 864 258 150 32 32 chr17 36656496 36656558 -58616093 + RLTR19-int LTR ERVK 906 967 -5170 2 864 4432 14 2 12 chr17 36657269 36657767 -58614884 - MT2_Mm LTR ERVL 0 493 1 2 864 321 0 0 0 chr17 36657767 36657805 -58614846 - MERVL-int LTR ERVL 0 5485 5448 2 864 343 167 46 35 chr17 36657805 36657892 -58614759 - ORR1D2-int LTR MaLR -1323 640 553 2 864 41390 16 14 0 chr17 36657892 36663167 -58609484 - MERVL-int LTR ERVL -125 5360 13 2 864 677 242 8 97 chr17 36663167 36663179 -58609472 + RMER10A LTR ERVL 33 44 -398 2 864 4432 14 2 12 chr17 36663179 36663677 -58608974 - MT2_Mm LTR ERVL 0 493 1 2 864 677 242 8 97 chr17 36663677 36663902 -58608749 + RMER10A LTR ERVL 45 248 -194 2 864 966 259 28 43 chr17 36663900 36664223 -58608428 + RLTR20B3 LTR ERVK 199 516 -61 2 864 26 64 0 0 chr17 36664229 36664276 -58608375 + AT_rich Low_complexity Low_complexity 1 47 0 2 864 375 73 0 0 chr17 36664286 36664341 -58608310 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 864 247 350 30 30 chr17 36664364 36664464 -58608187 - B3A SINE B2 -48 150 51 2 864 260 79 0 0 chr17 36665727 36665764 -58606887 + MTB_Mm LTR MaLR 1 37 -370 2 864 796 242 10 26 chr17 36665764 36666055 -58606596 + RLTR26 LTR ERVK 1 258 -648 2 864 250 342 17 0 chr17 36666425 36666542 -58606109 + Charlie1a DNA MER1_type 617 735 -720 2 864 383 244 173 27 chr17 36666551 36666736 -58605915 + RLTR12B LTR ERVK 11 222 -306 2 864 26 64 0 0 chr17 36667039 36667086 -58605565 + AT_rich Low_complexity Low_complexity 1 47 0 2 864 507 294 118 0 chr17 36667313 36667466 -58605185 - B3 SINE B2 -11 205 35 2 864 465 298 16 0 chr17 36667488 36667612 -58605039 + B1_Mur1 SINE Alu 21 146 -3 2 864 46 0 0 0 chr17 36667618 36667664 -58604987 + AT_rich Low_complexity Low_complexity 1 46 0 2 864 292 358 51 62 chr17 36667725 36667901 -58604750 + B3A SINE B2 10 183 -15 2 864 431 155 12 0 chr17 36667975 36668059 -58604592 + (TA)n Simple_repeat Simple_repeat 2 86 0 2 864 7203 64 26 2 chr17 36668203 36669081 -58603570 + L1Md_F2 LINE L1 5672 6570 -12 2 864 289 275 48 29 chr17 36669223 36669328 -58603323 + Charlie1a DNA MER1_type 1349 1455 0 2 864 846 259 31 23 chr17 36670345 36670381 -58602270 + ORR1D1 LTR MaLR 1 41 -333 2 864 276 77 0 0 chr17 36670381 36670420 -58602231 + (TA)n Simple_repeat Simple_repeat 2 40 0 2 864 846 260 33 32 chr17 36670420 36670667 -58601984 + ORR1D1 LTR MaLR 40 258 -116 2 864 180 0 0 0 chr17 36671535 36671555 -58601096 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2 864 22 35 0 0 chr17 36672919 36672948 -58599703 + AT_rich Low_complexity Low_complexity 1 29 0 2 864 1232 86 29 0 chr17 36673179 36673353 -58599298 - B2_Mm1t SINE B2 -6 187 9 2 864 1843 244 38 30 chr17 36673762 36674261 -58598390 + RLTR11A LTR ERVK 1 503 -25 2 864 687 266 34 10 chr17 36674667 36674876 -58597775 + B3 SINE B2 3 216 0 2 864 590 240 92 38 chr17 36676278 36676516 -58596135 + RMER17C LTR ERVK 3 253 -157 2 864 403 284 12 68 chr17 36676492 36676741 -58595910 + RMER17C LTR ERVK 84 318 -92 2 864 1141 238 121 19 chr17 36676896 36677260 -58595391 - MTD LTR MaLR -14 405 5 2 864 270 311 0 70 chr17 36677263 36677377 -58595274 + ORR1D1 LTR MaLR 5 110 -264 2 864 286 302 0 0 chr17 36678831 36678917 -58593734 - RLTR11B LTR ERVK -168 285 200 2 864 581 240 13 84 chr17 36678913 36679140 -58593511 - RLTR11B LTR ERVK -211 242 32 2 864 440 273 18 3 chr17 36679715 36679896 -58592755 - L1MC LINE L1 -3386 2760 2577 2 864 2378 198 113 25 chr17 36680714 36681293 -58591358 + MT2B LTR ERVL 3 539 -62 2 864 315 286 14 148 chr17 36687816 36688025 -58584626 + L1MC LINE L1 2208 2388 -3758 2 864 6397 138 20 6 chr17 36688419 36689408 -58583243 + Lx3A LINE L1 5972 6974 -7 2 864 21 0 0 0 chr17 36689442 36689463 -58583188 + AT_rich Low_complexity Low_complexity 1 21 0 2 864 34 0 0 0 chr17 36689639 36689673 -58582978 + AT_rich Low_complexity Low_complexity 1 34 0 2 864 2079 239 41 37 chr17 36689862 36690401 -58582250 + RLTR20B2 LTR ERVK 1 541 -19 2 864 238 333 45 9 chr17 36691046 36691158 -58581493 - ORR1E LTR MaLR -237 122 7 2 864 726 256 136 12 chr17 36691162 36691508 -58581143 + MTD LTR MaLR 5 419 0 2 864 387 298 74 59 chr17 36691574 36691777 -58580874 - B3 SINE B2 -10 206 1 2 864 1159 201 7 44 chr17 36692099 36692374 -58580277 - ORR1A4 LTR MaLR 0 329 1 2 864 231 191 225 42 chr17 36692813 36692884 -58579767 - MT2C_Mm LTR ERVL -223 252 169 2 864 5915 104 6 11 chr17 36693140 36694021 -58578630 + MusHAL1 LINE L1 1405 2280 -432 2 864 2305 181 44 18 chr17 36694120 36694617 -58578034 + MT2B LTR ERVL 1 559 -42 2 864 5789 85 3 0 chr17 36696431 36697196 -58575455 - L1_Mus2 LINE L1 -12 5871 5105 2 864 5518 73 1 0 chr17 36697196 36697866 -58574785 + L1_Mus2 LINE L1 5895 6565 -1 2 865 281 276 113 9 chr17 36700811 36700917 -58571734 - ORR1E LTR MaLR -237 122 6 2 865 821 198 153 8 chr17 36701030 36701241 -58571410 + MTD LTR MaLR 175 401 -18 2 865 378 0 0 0 chr17 36701338 36701380 -58571271 + (TC)n Simple_repeat Simple_repeat 2 43 0 2 865 606 99 0 0 chr17 36701380 36701470 -58571181 + (TG)n Simple_repeat Simple_repeat 2 92 0 2 865 355 270 33 33 chr17 36701504 36701596 -58571055 - B3A SINE B2 -60 138 47 2 865 40478 32 2 6 chr17 36703202 36709583 -58563068 - L1Md_A LINE L1 -1 6581 232 2 865 345 240 38 129 chr17 36709677 36709887 -58562764 + RLTR11B LTR ERVK 72 262 -191 2 865 358 251 19 225 chr17 36709883 36710150 -58562501 + RLTR11B LTR ERVK 200 411 -42 2 865 313 330 73 0 chr17 36711388 36711497 -58561154 - ORR1E LTR MaLR -237 122 6 2 865 1006 252 140 6 chr17 36711506 36711874 -58560777 + MTD LTR MaLR 3 405 -14 2 865 296 376 17 25 chr17 36712017 36712137 -58560514 - B3A SINE B2 -46 152 34 2 865 215 169 31 0 chr17 36713498 36713563 -58559088 + (CAGA)n Simple_repeat Simple_repeat 2 68 0 2 865 1141 104 19 107 chr17 36713679 36713894 -58558757 - RLTR22_Mur LTR ERVK -34 1814 1619 2 865 309 125 0 0 chr17 36713979 36714035 -58558616 + L1_Mus3 LINE L1 6578 6633 -5 2 865 2016 80 25 19 chr17 36714413 36714730 -58557921 - RLTR22_Mus LTR ERVK -991 817 499 2 865 467 20 0 0 chr17 36714730 36714781 -58557870 + L1Md_F2 LINE L1 5536 5586 -297 2 865 8264 58 4 23 chr17 36714781 36715794 -58556857 + L1Md_F2 LINE L1 5587 6580 -2 2 865 3750 78 2 8 chr17 36715794 36716311 -58556340 - RLTR22_Mus LTR ERVK -1294 514 1 2 865 1461 218 124 20 chr17 36716815 36717170 -58555481 - ORR1B1 LTR MaLR -2 392 1 2 865 2332 156 7 12 chr17 36717993 36718396 -58554255 - L1_Mur2 LINE L1 -1508 4369 3969 2 865 360 0 0 0 chr17 36719274 36719314 -58553337 + (TA)n Simple_repeat Simple_repeat 1 40 0 2 865 267 210 49 0 chr17 36719329 36719410 -58553241 + (TCTG)n Simple_repeat Simple_repeat 2 86 0 2 865 347 367 11 73 chr17 36719410 36719601 -58553050 - B3A SINE B2 -24 192 14 2 865 380 298 25 38 chr17 36720755 36720924 -58551727 - ORR1E LTR MaLR -206 164 6 2 865 1004 253 138 24 chr17 36720924 36721300 -58551351 + MTD LTR MaLR 1 419 0 2 865 231 411 10 61 chr17 36721390 36721587 -58551064 - B3 SINE B2 -29 187 1 2 865 4720 161 48 24 chr17 36723422 36724343 -58548308 + Lx2B LINE L1 6058 7000 0 2 865 1251 61 6 0 chr17 36725309 36725472 -58547179 + L1Md_T LINE L1 6419 6582 0 2 865 2352 194 75 2 chr17 36725472 36726085 -58546566 + RMER19B LTR ERVK 8 665 -237 2 865 11576 72 23 59 chr17 36726090 36727965 -58544686 + RLTR22_Mus LTR ERVK 1 1808 0 2 865 1127 208 24 12 chr17 36727965 36728198 -58544453 + RMER19B LTR ERVK 667 902 0 2 865 383 306 25 0 chr17 36728273 36728394 -58544257 + B1_Mur1 SINE Alu 21 144 -5 2 865 7084 13 0 0 chr17 36728454 36729240 -58543411 + L1Md_T LINE L1 4801 5586 -297 2 865 8574 31 0 5 chr17 36729241 36730241 -58542410 + L1Md_T LINE L1 5588 6582 0 2 865 374 326 41 14 chr17 36730315 36730461 -58542190 + B3 SINE B2 3 152 -64 2 865 227 93 23 0 chr17 36730472 36730515 -58542136 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 865 294 238 19 19 chr17 36730537 36730644 -58542007 + (CAGAGA)n Simple_repeat Simple_repeat 4 110 0 2 865 2905 119 16 2 chr17 36730862 36731308 -58541343 - L1_Mus3 LINE L1 -2 6636 6185 2 865 8753 132 31 14 chr17 36732076 36734388 -58538263 + Lx3B LINE L1 3967 6973 0 2 865 7254 91 9 2 chr17 36735004 36735985 -58536666 + L1_Mus4 LINE L1 5647 6634 -2 2 865 252 0 0 0 chr17 36735991 36736019 -58536632 + (TAGA)n Simple_repeat Simple_repeat 3 30 0 2 865 1293 138 9 5 chr17 36736022 36736240 -58536411 + MTB LTR MaLR 182 400 0 2 865 647 177 28 7 chr17 36736245 36736387 -58536264 + ORR1B1 LTR MaLR 1 145 -249 2 865 226 209 15 23 chr17 36736578 36736710 -58535941 + CT-rich Low_complexity Low_complexity 2 132 0 2 865 315 0 0 0 chr17 36736753 36736788 -58535863 + (TATG)n Simple_repeat Simple_repeat 4 38 0 2 865 234 319 19 89 chr17 36737892 36738050 -58534601 + B2_Mm2 SINE B2 1 147 -48 2 865 252 0 0 0 chr17 36738063 36738091 -58534560 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 865 638 269 139 11 chr17 36738203 36738519 -58534132 - MTD LTR MaLR -14 405 49 2 865 267 314 86 0 chr17 36738562 36738667 -58533984 + ORR1E LTR MaLR 6 119 -240 2 865 1678 148 3 21 chr17 36739425 36739715 -58532936 - RLTR31B_Mm LTR ERVK 0 557 273 2 865 9852 25 0 0 chr17 36739739 36741541 -58531110 - L1Md_T LINE L1 -1 6581 4780 2 865 1546 112 11 15 chr17 36741541 36741803 -58530848 - RLTR31B_Mm LTR ERVK -296 261 1 2 865 357 173 0 13 chr17 36742300 36742376 -58530275 - MTD LTR MaLR -18 401 327 2 865 5249 104 13 50 chr17 36742379 36743295 -58529356 - RMER17A2 LTR ERVK -4 902 21 3 865 345 238 262 0 chr17 36743301 36743427 -58529224 - MTD LTR MaLR -87 332 174 2 865 252 276 60 20 chr17 36743542 36743642 -58529009 + ORR1E LTR MaLR 6 109 -250 3 865 7251 183 83 9 chr17 36744594 36746865 -58525786 - Lx4B LINE L1 -8 7050 4602 3 865 39098 7 0 0 chr17 36746864 36752425 -58520226 + L1Md_A LINE L1 25 5586 -297 3 865 9161 3 1 0 chr17 36752425 36753420 -58519231 + L1Md_A LINE L1 5587 6582 0 3 865 2294 169 25 2 chr17 36753420 36753852 -58518799 - Lx4B LINE L1 -1261 4616 4175 3 865 919 114 7 0 chr17 36754644 36754784 -58517867 - B1_Mus1 SINE Alu -5 143 3 3 865 485 331 0 0 chr17 36755157 36755305 -58517346 - B3A SINE B2 -48 150 3 3 865 49 0 0 0 chr17 36755356 36755405 -58517246 + AT_rich Low_complexity Low_complexity 1 49 0 3 865 322 339 18 0 chr17 36755429 36755538 -58517113 - B1_Mur1 SINE Alu -16 133 23 3 865 494 271 7 36 chr17 36755549 36755614 -58517037 + B3 SINE B2 2 62 -154 3 865 4136 193 41 60 chr17 36755614 36756533 -58516118 - RMER19B LTR ERVK 0 902 1 3 865 494 271 7 36 chr17 36756533 36756605 -58516046 + B3 SINE B2 63 135 -81 3 865 10496 59 12 5 chr17 36756967 36759008 -58513643 - L1Md_F2 LINE L1 -2 6580 4517 3 865 3204 192 32 3 chr17 36759558 36760160 -58512491 - Lx2B LINE L1 -5 6995 6377 3 865 2964 46 0 0 chr17 36761174 36761520 -58511131 + ORR1A1 LTR MaLR 1 346 0 3 865 2859 77 0 8 chr17 36761750 36762128 -58510523 - L1Md_F2 LINE L1 -13 6569 6195 3 865 2591 170 147 0 chr17 36762324 36762847 -58509804 - MT2B LTR ERVL 0 601 2 3 865 2391 106 59 44 chr17 36763333 36763738 -58508913 - IAPLTR2_Mm LTR ERVK 0 411 1 3 865 6917 39 11 11 chr17 36763740 36764567 -58508084 - IAPEz-int LTR ERVK -2 6479 5653 3 865 2715 70 0 3 chr17 36764562 36764905 -58507746 - IAPEz-int LTR ERVK -4781 1700 1359 3 865 4106 94 36 39 chr17 36764905 36765726 -58506925 - IAPEz-int LTR ERVK -5819 662 9 3 865 2494 101 112 25 chr17 36765727 36766164 -58506487 - IAPLTR2_Mm LTR ERVK 0 475 1 3 865 320 270 131 30 chr17 36766474 36766642 -58506009 + L1MC LINE L1 2564 2748 -3398 3 865 507 273 40 90 chr17 36767178 36767456 -58505195 + RLTR11B LTR ERVK 1 264 -189 3 865 6037 142 43 4 chr17 36767458 36768918 -58503733 + L1_Mus4 LINE L1 5120 6636 0 3 865 223 220 34 0 chr17 36768973 36769032 -58503619 + (TCTG)n Simple_repeat Simple_repeat 2 62 0 3 865 341 58 19 0 chr17 36769041 36769093 -58503558 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 865 414 0 0 0 chr17 36769095 36769141 -58503510 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 865 282 288 38 0 chr17 36769222 36769302 -58503349 - B3A SINE B2 -113 85 3 3 865 57 47 0 0 chr17 36769311 36769396 -58503255 + AT_rich Low_complexity Low_complexity 1 85 0 3 865 361 305 25 8 chr17 36769413 36769532 -58503119 - B1_Mur1 SINE Alu -7 142 22 3 865 277 279 159 14 chr17 36769569 36769707 -58502944 + B3 SINE B2 48 205 -11 3 865 557 295 100 0 chr17 36770638 36770828 -58501823 + B3 SINE B2 8 216 0 3 865 481 299 70 43 chr17 36771248 36771433 -58501218 + B3 SINE B2 1 190 -26 3 865 631 267 136 12 chr17 36771511 36771857 -58500794 - MTD LTR MaLR 0 419 5 3 865 1728 218 97 12 chr17 36772651 36773134 -58499517 - RLTR20B3 LTR ERVK -53 524 1 3 865 21 0 0 0 chr17 36773601 36773622 -58499029 + AT_rich Low_complexity Low_complexity 1 21 0 3 865 5813 135 15 34 chr17 36773622 36773877 -58498774 - Lx3A LINE L1 -7 6974 6736 3 865 4333 15 0 18 chr17 36773877 36774368 -58498283 + LTRIS_Mm LTR ERV1 1 482 0 3 865 5813 135 15 34 chr17 36774368 36775135 -58497516 - Lx3A LINE L1 -246 6735 5972 3 865 24 0 0 0 chr17 36777201 36777225 -58495426 + AT_rich Low_complexity Low_complexity 1 24 0 3 865 1119 77 14 0 chr17 36780058 36780201 -58492450 + B1_Mus2 SINE Alu 3 147 0 3 865 200 208 0 0 chr17 36780201 36780249 -58492402 + A-rich Low_complexity Low_complexity 6 53 0 3 865 5664 223 25 48 chr17 36780351 36781955 -58490696 - Lx4B LINE L1 -6 7052 5484 3 865 2470 189 5 16 chr17 36782953 36783398 -58489253 - RLTR26 LTR ERVK -202 440 1 3 865 229 280 82 33 chr17 36783769 36783891 -58488760 - Charlie1a DNA MER1_type -711 744 617 3 865 342 0 0 0 chr17 36784530 36784568 -58488083 + (TTAA)n Simple_repeat Simple_repeat 1 38 0 3 865 31600 129 24 32 chr17 36784731 36791152 -58481499 - L1_Mus1 LINE L1 0 6567 217 3 865 567 310 19 39 chr17 36791773 36791981 -58480670 + B3 SINE B2 3 206 -10 3 865 847 161 151 5 chr17 36792605 36792782 -58479869 + L1_Mus3 LINE L1 6409 6633 -5 3 865 790 142 0 0 chr17 36793529 36793656 -58478995 - ORR1A2 LTR MaLR -8 319 193 3 865 1027 256 30 92 chr17 36793675 36794011 -58478640 + ORR1A4 LTR MaLR 5 319 -10 3 865 35 41 0 0 chr17 36794832 36794881 -58477770 + AT_rich Low_complexity Low_complexity 1 49 0 3 865 229 185 111 0 chr17 36794983 36795064 -58477587 + L1M2 LINE L1 2745 2834 -3309 3 865 478 256 109 16 chr17 36795714 36795897 -58476754 - MTD LTR MaLR 0 419 220 3 865 267 292 43 86 chr17 36795945 36796061 -58476590 - MTD LTR MaLR -308 111 1 3 865 344 291 45 18 chr17 36796062 36796174 -58476477 + ORR1E LTR MaLR 7 121 -238 3 865 1885 247 41 39 chr17 36796828 36797368 -58475283 - RLTR20B2 LTR ERVK -19 541 1 3 865 22 0 0 0 chr17 36797833 36797855 -58474796 + AT_rich Low_complexity Low_complexity 1 22 0 3 865 1215 195 27 5 chr17 36797857 36798079 -58474572 - Lx3A LINE L1 -6 6975 6749 3 865 2649 134 19 19 chr17 36798080 36798545 -58474106 - Lx3A LINE L1 -524 6457 5993 3 865 33277 82 8 8 chr17 36799098 36804257 -58468394 + L1Md_F2 LINE L1 217 5586 -297 3 865 8388 60 2 1 chr17 36804257 36805252 -58467399 + L1Md_F2 LINE L1 5587 6582 0 3 865 191 103 0 25 chr17 36806780 36806820 -58465831 + (TTA)n Simple_repeat Simple_repeat 2 40 0 3 865 5891 209 24 27 chr17 36809733 36812134 -58460517 - Lx4B LINE L1 -6 7052 4661 3 865 3821 203 37 53 chr17 36812150 36813061 -58459590 - RMER19B LTR ERVK -5 897 1 3 865 7029 50 4 5 chr17 36813657 36814466 -58458185 - RLTR13C2 LTR ERVK 0 808 1 3 865 615 277 27 13 chr17 36815525 36815675 -58456976 + B3 SINE B2 3 154 -62 3 865 1686 222 75 69 chr17 36815675 36816183 -58456468 + RLTR11A LTR ERVK 1 511 -17 3 865 739 160 34 20 chr17 36817338 36817485 -58455166 - RLTR26 LTR ERVK 0 642 494 3 865 3039 175 24 13 chr17 36817477 36818009 -58454642 - RLTR26 LTR ERVK -98 544 7 3 865 1595 143 22 11 chr17 36818041 36818310 -58454341 + L1_Mus3 LINE L1 6024 6295 -343 3 865 3117 200 41 35 chr17 36818572 36819210 -58453441 - RLTR26 LTR ERVK 0 642 1 3 865 231 280 84 65 chr17 36819210 36819312 -58453339 + LTR16D1 LTR ERVL 231 334 -341 3 865 3507 65 3 159 chr17 36820156 36820761 -58451890 - L1_Mus1 LINE L1 0 6567 6057 3 865 234 0 0 0 chr17 36820948 36820974 -58451677 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 3 865 282 69 52 0 chr17 36821276 36821334 -58451317 + (TTTG)n Simple_repeat Simple_repeat 2 62 0 3 865 468 335 52 33 chr17 36821768 36821978 -58450673 + B3 SINE B2 1 214 -2 3 865 788 179 0 27 chr17 36823364 36823506 -58449145 - ORR1A2 LTR MaLR -8 319 182 3 865 1198 230 45 84 chr17 36823506 36823838 -58448813 + ORR1A4 LTR MaLR 1 319 -10 3 865 342 242 71 40 chr17 36824193 36824292 -58448359 - ORR1A2 LTR MaLR -308 111 10 3 865 361 284 36 9 chr17 36824310 36824420 -58448231 + ORR1E LTR MaLR 7 119 -240 3 865 2027 228 47 40 chr17 36825056 36825612 -58447039 - RLTR20B2 LTR ERVK 0 560 1 3 865 2636 107 69 3 chr17 36825919 36826294 -58446357 + MTB LTR MaLR 1 400 0 3 865 273 336 18 26 chr17 36826996 36827109 -58445542 - PB1D10 SINE Alu -5 112 1 3 865 589 46 0 33 chr17 36827599 36827689 -58444962 - L1Md_F2 LINE L1 -3 6579 6493 3 865 8594 59 7 5 chr17 36827689 36829214 -58443437 + L1Md_F2 LINE L1 4762 6296 -286 3 865 324 121 0 0 chr17 36830298 36830356 -58442295 - B1_Mur4 SINE Alu -1 149 62 3 865 1509 82 145 9 chr17 36830731 36830883 -58441768 + L1Md_F2 LINE L1 6332 6481 -101 3 865 191 36 36 0 chr17 36830883 36830911 -58441740 + (TGGG)n Simple_repeat Simple_repeat 1 29 0 3 865 1509 82 145 9 chr17 36830911 36830979 -58441672 + L1Md_F2 LINE L1 6482 6581 -1 3 866 964 226 18 132 chr17 36832257 36832705 -58439946 - RMER17C LTR ERVK -1 409 13 3 866 322 317 104 16 chr17 36834129 36834254 -58438397 + B3 SINE B2 1 136 -80 3 866 348 64 0 0 chr17 36834287 36834334 -58438317 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 866 588 253 331 16 chr17 36834424 36834734 -58437917 - MTD LTR MaLR 0 419 12 3 866 341 274 35 0 chr17 36834753 36834866 -58437785 + ORR1E LTR MaLR 6 122 -237 3 866 1157 62 0 0 chr17 36835168 36835312 -58437339 + B1_Mm SINE Alu 3 146 -1 3 866 816 321 45 42 chr17 36842127 36842621 -58430030 - RLTR6-int LTR ERV1 -126 7652 7158 3 866 350 273 110 20 chr17 36843981 36844127 -58428524 - MuLV-int LTR ERV1 -1953 5499 5341 3 866 36174 35 0 3 chr17 36844269 36850150 -58422501 + L1Md_T LINE L1 1 5589 -297 3 866 9037 11 0 0 chr17 36850150 36851146 -58421505 + L1Md_T LINE L1 5590 6585 0 3 866 16570 20 0 0 chr17 36851179 36853066 -58419585 + L1Md_T LINE L1 3700 5586 -297 3 866 9014 13 0 0 chr17 36853066 36854062 -58418589 + L1Md_T LINE L1 5587 6582 0 3 866 2315 319 56 50 chr17 36854077 36855856 -58416795 - MuLV-int LTR ERV1 -2300 5306 3518 3 866 1791 84 4 0 chr17 36855859 36856167 -58416484 + L1VL2 LINE L1 866 1174 -2441 3 866 2195 113 34 17 chr17 36856136 36856487 -58416164 + L1_Mus3 LINE L1 6105 6461 -177 3 866 1955 30 0 4 chr17 36856513 36856778 -58415873 - ORR1A1-int LTR MaLR -1528 264 1 3 866 1486 38 0 0 chr17 36856778 36856964 -58415687 - ORR1A1 LTR MaLR 0 346 161 3 866 611 146 10 10 chr17 36856975 36857079 -58415572 - L1_Mur2 LINE L1 -1104 4773 4670 3 866 549 107 0 0 chr17 36857071 36857146 -58415505 + L1_Mus2 LINE L1 6209 6283 -355 3 866 1202 70 0 0 chr17 36857146 36857304 -58415347 + L1_Mus2 LINE L1 6408 6565 -1 3 866 406 269 34 0 chr17 36857317 36857436 -58415215 + RLTR14 LTR ERV1 260 382 0 3 866 529 226 0 59 chr17 36857495 36857631 -58415020 + B1_Mus1 SINE Alu 20 147 -1 3 866 462 96 0 0 chr17 36857633 36857706 -58414945 + (TG)n Simple_repeat Simple_repeat 2 74 0 3 866 220 196 39 0 chr17 36857714 36857765 -58414886 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 866 180 175 24 36 chr17 36857765 36857848 -58414803 + (TTATA)n Simple_repeat Simple_repeat 5 86 0 3 866 3514 25 2 0 chr17 36857894 36858289 -58414362 - MTA_Mm LTR MaLR 0 396 1 3 866 7619 73 24 70 chr17 36858290 36859441 -58413210 - MTA_Mm-int LTR MaLR -1 1097 1 3 866 3281 39 18 0 chr17 36859441 36859830 -58412821 - MTA_Mm LTR MaLR 0 396 1 3 866 342 0 0 0 chr17 36860779 36860817 -58411834 + (ACCTG)n Simple_repeat Simple_repeat 2 39 0 4 866 4030 205 31 6 chr17 36861696 36862636 -58410015 + Lx4B LINE L1 5967 6969 -31 4 866 222 37 0 0 chr17 36862636 36862663 -58409988 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 4 866 1078 78 35 0 chr17 36862757 36862899 -58409752 + B1_Mus1 SINE Alu 2 148 0 4 866 224 289 98 30 chr17 36863196 36863328 -58409323 - B2_Mm2 SINE B2 -48 147 7 4 866 385 261 4 9 chr17 36863611 36863727 -58408924 - ORR1D2 LTR MaLR -241 118 1 4 866 340 340 40 20 chr17 36863790 36863940 -58408711 - B3A SINE B2 0 198 46 4 866 1117 59 0 0 chr17 36867061 36867197 -58405454 + B1_Mus2 SINE Alu 2 137 -10 4 866 396 0 0 0 chr17 36867197 36867241 -58405410 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 4 866 499 240 23 0 chr17 36868607 36868736 -58403915 + B1_Mur2 SINE Alu 13 144 -5 4 866 382 329 12 12 chr17 36868743 36868909 -58403742 + B3A SINE B2 24 189 -9 4 866 2960 179 124 28 chr17 36872868 36873523 -58399128 - RMER6D LTR ERVK 0 720 3 4 866 209 196 0 38 chr17 36874181 36874234 -58398417 + T-rich Low_complexity Low_complexity 6 56 0 4 866 707 144 0 8 chr17 36874241 36874367 -58398284 + CT-rich Low_complexity Low_complexity 3 127 0 4 866 2982 272 92 50 chr17 36874391 36875617 -58397034 - RMER1A Other Other -14 1016 18 4 866 591 298 87 31 chr17 36875761 36876106 -58396545 + MT2B LTR ERVL 65 561 -40 4 866 211 148 0 53 chr17 36876129 36876186 -58396465 + (CATATA)n Simple_repeat Simple_repeat 5 58 0 4 866 447 19 0 0 chr17 36876412 36876464 -58396187 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 866 800 268 0 0 chr17 36876470 36876683 -58395968 - RLTR14 LTR ERV1 -158 224 12 4 866 20635 145 16 11 chr17 36876774 36878333 -58394318 + L1M4b LINE L1 2153 4179 -2564 4 866 1044 193 88 127 chr17 36878333 36878742 -58393909 + RLTR9C LTR ERVK 1 393 0 4 866 20635 147 16 8 chr17 36878742 36880707 -58391944 + L1M4b LINE L1 4180 6167 -576 4 866 34132 85 8 15 chr17 36880705 36886565 -58386086 + L1Md_F2 LINE L1 118 5933 -649 4 866 4048 162 408 7 chr17 36886560 36887300 -58385351 + L1_Mus3 LINE L1 3977 5156 -727 4 866 1082 115 0 0 chr17 36887300 36887448 -58385203 + B1_Mus1 SINE Alu 1 148 0 4 866 5433 126 126 4 chr17 36887448 36888544 -58384107 + L1_Mus3 LINE L1 5157 6361 -277 4 866 512 246 44 7 chr17 36888603 36888738 -58383913 + L1Md_F LINE L1 662 801 -5813 4 866 2613 181 12 8 chr17 36888746 36889316 -58383335 + L1Md_F LINE L1 723 1293 -5689 4 866 197 108 27 0 chr17 36889467 36889504 -58383147 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 4 866 756 231 28 46 chr17 36890064 36890282 -58382369 + B3 SINE B2 1 214 -2 4 866 649 210 215 0 chr17 36894088 36894274 -58378377 + URR1A DNA MER1_type 1 226 0 4 866 251 306 36 36 chr17 36894852 36894991 -58377660 + Charlie1a DNA MER1_type 622 760 -695 4 866 566 197 39 23 chr17 36895212 36895342 -58377309 + B1_Mur1 SINE Alu 14 145 -4 4 866 491 314 18 6 chr17 36895349 36895519 -58377132 + B3A SINE B2 27 198 0 4 866 444 77 0 0 chr17 36895554 36895619 -58377032 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 4 866 354 261 34 11 chr17 36895759 36895848 -58376803 + ID_B1 SINE B4 4 94 -130 4 866 253 278 83 0 chr17 36895889 36895961 -58376690 + B2_Mm1t SINE B2 1 78 -115 4 866 1219 71 29 6 chr17 36896178 36896348 -58376303 + B2_Mm2 SINE B2 2 175 -20 4 866 228 208 0 20 chr17 36896350 36896399 -58376252 - MTEa LTR MaLR -65 314 267 4 866 291 175 0 16 chr17 36896416 36896480 -58376171 - RMER19B LTR ERVK -2 900 838 4 866 27 0 0 0 chr17 36897807 36897834 -58374817 + AT_rich Low_complexity Low_complexity 1 27 0 4 866 4614 170 24 12 chr17 36898416 36899261 -58373390 - RLTR13A LTR ERVK 0 855 1 4 866 3686 211 49 75 chr17 36899952 36900851 -58371800 - RMER19B LTR ERVK -49 853 1 4 866 631 284 93 45 chr17 36900864 36901111 -58371540 - MTEa LTR MaLR -120 259 1 4 866 351 105 0 0 chr17 36901139 36901196 -58371455 + (ATTG)n Simple_repeat Simple_repeat 2 58 0 4 866 420 272 131 36 chr17 36901300 36901521 -58371130 - LTR41 LTR ERVL -463 305 64 4 866 1135 69 0 0 chr17 36901808 36901952 -58370699 + B2_Mm2 SINE B2 4 147 -48 4 866 588 144 10 0 chr17 36901952 36902049 -58370602 + Lx7 LINE L1 5361 5458 -422 4 866 4605 185 51 8 chr17 36902051 36902916 -58369735 - RMER19B LTR ERVK 0 902 1 4 866 380 259 96 16 chr17 36902916 36903104 -58369547 + Lx7 LINE L1 5956 6158 -1538 4 866 1460 190 47 27 chr17 36903120 36903418 -58369233 + RLTR19 LTR ERVK 191 494 -5 4 866 964 213 74 0 chr17 36903429 36903631 -58369020 + RLTR18B LTR ERVK 287 503 -9 4 866 504 167 96 96 chr17 36903642 36903808 -58368843 + Lx7 LINE L1 7531 7696 0 4 866 277 276 69 9 chr17 36904235 36904367 -58368284 - Charlie1 DNA MER1_type 0 2781 2637 4 866 351 156 18 35 chr17 36904628 36904741 -58367910 + (TCTCTG)n Simple_repeat Simple_repeat 6 116 0 4 866 420 288 27 0 chr17 36904817 36904928 -58367723 - B3A SINE B2 -82 116 3 4 866 48 53 0 0 chr17 36904948 36905024 -58367627 + AT_rich Low_complexity Low_complexity 1 76 0 4 866 374 328 16 16 chr17 36905034 36905155 -58367496 - B1_Mur1 SINE Alu -8 141 21 4 866 558 254 12 31 chr17 36905164 36905328 -58367323 + B3 SINE B2 2 158 -37 4 866 479 288 88 48 chr17 36905622 36905835 -58366816 - RLTR12B LTR ERVK -9 519 246 4 866 405 0 0 0 chr17 36905835 36905880 -58366771 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 866 479 305 36 68 chr17 36905880 36906078 -58366573 - RLTR12B LTR ERVK -283 245 47 4 866 283 294 40 47 chr17 36906069 36906219 -58366432 - Charlie1 DNA MER1_type -688 2093 1945 4 866 21 57 0 0 chr17 36906604 36906639 -58366012 + AT_rich Low_complexity Low_complexity 1 35 0 4 866 667 194 41 20 chr17 36907785 36907932 -58364719 + URR1A DNA MER1_type 77 226 0 4 866 327 335 36 6 chr17 36908687 36908855 -58363796 + Charlie1a DNA MER1_type 844 1016 -439 4 866 521 237 36 15 chr17 36908860 36908997 -58363654 + B1_Mur2 SINE Alu 10 149 0 4 866 494 312 12 17 chr17 36909010 36909183 -58363468 + B3A SINE B2 27 198 0 4 866 3172 183 123 17 chr17 36913247 36913898 -58358753 - RMER6D LTR ERVK 0 720 1 4 866 642 340 0 11 chr17 36914093 36914280 -58358371 - B3 SINE B2 -6 210 26 4 866 512 292 72 15 chr17 36914431 36914598 -58358053 - B3A SINE B2 -37 179 2 4 866 180 179 0 0 chr17 36915157 36915196 -58357455 + (TTG)n Simple_repeat Simple_repeat 2 40 0 4 866 305 140 0 17 chr17 36915196 36915254 -58357397 + CT-rich Low_complexity Low_complexity 2 58 0 4 866 3147 243 88 60 chr17 36915282 36916510 -58356141 - RMER1A Other Other -1 1065 2 4 866 818 226 240 27 chr17 36916665 36917002 -58355649 + MT2A LTR ERVL 85 493 -40 4 866 813 265 17 17 chr17 36917291 36917525 -58355126 - RLTR14 LTR ERV1 -137 245 12 4 866 1921 235 27 51 chr17 36917648 36918173 -58354478 - RLTR11A2 LTR ERVK -15 512 1 4 866 530 210 23 61 chr17 36918179 36918311 -58354340 + B1_Mur2 SINE Alu 23 149 0 4 866 261 254 0 0 chr17 36918572 36918627 -58354024 - B1_Mur3 SINE Alu -16 133 79 4 866 8324 37 2 3 chr17 36919165 36920448 -58352203 - L1Md_F2 LINE L1 -13 6569 5288 4 866 1331 94 0 16 chr17 36921165 36921348 -58351303 - L1Md_T LINE L1 0 6582 6403 4 866 774 79 0 0 chr17 36921348 36921449 -58351202 - L1Md_F2 LINE L1 -600 5283 5183 4 866 2762 49 61 9 chr17 36921660 36921989 -58350662 + ORR1A1 LTR MaLR 1 346 0 4 866 1787 194 14 17 chr17 36921998 36922355 -58350296 + RLTR15 LTR ERVK 4 359 0 4 866 897 292 127 46 chr17 36922517 36923148 -58349503 + Lx9 LINE L1 6959 7640 -4 4 866 363 206 19 132 chr17 36923262 36923368 -58349283 + B3 SINE B2 1 94 -122 4 866 1309 208 91 19 chr17 36923370 36923689 -58348962 + RLTR30 LTR ERV1 5 346 -33 4 866 566 242 24 0 chr17 36923699 36923823 -58348828 + B3 SINE B2 90 216 0 4 866 249 315 33 11 chr17 36923974 36924064 -58348587 + ID_B1 SINE B4 3 94 -130 4 866 955 279 73 91 chr17 36924352 36924474 -58348177 - MTEa LTR MaLR -3 376 265 4 866 4101 186 54 84 chr17 36924474 36925404 -58347247 - RMER19B LTR ERVK 0 902 1 4 866 955 279 73 91 chr17 36925404 36925664 -58346987 - MTEa LTR MaLR -115 264 1 4 866 372 288 189 26 chr17 36925781 36926045 -58346606 - LTR41 LTR ERVL -390 378 72 4 866 180 329 105 0 chr17 36926384 36926460 -58346191 + L3 LINE CR1 3229 3312 -1177 4 866 8208 29 41 3 chr17 36926530 36927453 -58345198 + RLTR13A2 LTR ERVK 1 958 0 4 866 1554 237 78 42 chr17 36927692 36928220 -58344431 + Lx9 LINE L1 7089 7635 -9 4 866 304 307 19 44 chr17 36928223 36928426 -58344225 - MTD LTR MaLR -29 390 148 4 866 4409 211 37 14 chr17 36928427 36929149 -58343502 + Lx7 LINE L1 375 1103 -6625 4 866 393 86 0 0 chr17 36929149 36929207 -58343444 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 866 4409 176 57 23 chr17 36929207 36929617 -58343034 + Lx7 LINE L1 1104 1530 -4350 4 866 719 206 0 0 chr17 36929627 36929763 -58342888 + B1_Mus2 SINE Alu 12 147 0 4 866 3056 215 38 175 chr17 36929775 36930185 -58342466 + Lx7 LINE L1 1525 1876 -4004 4 866 766 108 9 0 chr17 36930185 36930296 -58342355 + B1_Mus1 SINE Alu 37 148 0 4 866 3056 215 38 175 chr17 36930296 36930473 -58342178 + Lx7 LINE L1 1877 2029 -3851 4 866 6134 53 19 1 chr17 36930473 36931221 -58341430 + L1Md_F2 LINE L1 5830 6582 0 4 866 3056 145 60 88 chr17 36931221 36931246 -58341405 + Lx7 LINE L1 2030 2031 -3849 4 866 609 52 0 0 chr17 36931246 36931323 -58341328 + (GAAA)n Simple_repeat Simple_repeat 3 79 0 4 866 3056 145 60 88 chr17 36931323 36931367 -58341284 + Lx7 LINE L1 2032 2082 -3798 4 866 207 0 0 0 chr17 36931367 36931390 -58341261 + (CCA)n Simple_repeat Simple_repeat 1 23 0 4 866 3056 145 60 88 chr17 36931390 36931912 -58340739 + Lx7 LINE L1 2083 2618 -3262 4 866 950 102 101 18 chr17 36931913 36932082 -58340569 - RLTR22_Mur LTR ERVK -1561 287 105 4 866 1267 144 10 0 chr17 36932076 36932278 -58340373 + ORR1A4 LTR MaLR 124 327 -2 4 866 246 128 21 0 chr17 36932278 36932322 -58340329 + RMER4A LTR ERVK 422 466 0 4 866 2410 140 72 0 chr17 36932323 36932751 -58339900 + Lx7 LINE L1 5000 5458 -422 4 866 3712 222 60 15 chr17 36932796 36933648 -58339003 - RMER19B LTR ERVK -12 890 1 4 866 1891 195 65 18 chr17 36933648 36934091 -58338560 + Lx7 LINE L1 5956 6419 -1277 4 866 430 145 0 0 chr17 36934111 36934180 -58338471 + RLTR18B LTR ERVK 223 291 -221 4 866 2515 171 35 27 chr17 36934183 36934670 -58337981 + RLTR19 LTR ERVK 4 494 -5 4 866 1186 178 14 23 chr17 36934681 36934900 -58337751 + RLTR18B LTR ERVK 287 503 -9 4 866 808 207 0 40 chr17 36934908 36935084 -58337567 + Lx7 LINE L1 7528 7696 0 4 866 338 349 15 69 chr17 36935894 36935949 -58336702 - B3 SINE B2 -11 205 162 4 866 180 97 0 0 chr17 36935949 36935980 -58336671 + (TCTCTG)n Simple_repeat Simple_repeat 3 33 0 4 866 338 349 15 69 chr17 36935980 36936127 -58336524 - B3 SINE B2 -55 161 14 4 866 32 26 0 0 chr17 36936161 36936200 -58336451 + AT_rich Low_complexity Low_complexity 1 39 0 5 866 373 336 25 0 chr17 36936232 36936351 -58336300 - B1_Mur1 SINE Alu -3 146 25 5 866 503 264 189 6 chr17 36936358 36936522 -58336129 + B3 SINE B2 2 195 -21 5 866 3037 114 138 25 chr17 36936697 36937226 -58335425 - RLTR1D LTR ERV1 -16 589 1 5 866 207 0 0 0 chr17 36937360 36937383 -58335268 + (A)n Simple_repeat Simple_repeat 1 23 0 5 866 461 275 80 53 chr17 36937402 36937799 -58334852 - RLTR12B LTR ERVK -42 486 42 5 866 262 306 36 9 chr17 36937833 36937945 -58334706 - Charlie1a DNA MER1_type -724 731 617 5 866 5160 56 0 2 chr17 36937950 36938559 -58334092 + L1Md_F2 LINE L1 5970 6577 -5 5 866 24 32 0 0 chr17 36938559 36938590 -58334061 + AT_rich Low_complexity Low_complexity 1 31 0 5 866 1200 88 0 13 chr17 36939213 36939362 -58333289 + B1_Mus1 SINE Alu 2 148 0 5 866 195 42 0 0 chr17 36939364 36939388 -58333263 + (GAAA)n Simple_repeat Simple_repeat 2 25 0 5 866 1193 82 7 0 chr17 36940254 36940400 -58332251 + B1_Mm SINE Alu 1 147 0 5 866 837 228 47 33 chr17 36940645 36940858 -58331793 + B3 SINE B2 1 216 0 5 866 6222 84 11 3 chr17 36941971 36943342 -58329309 + L1VL2 LINE L1 445 1826 -1789 5 866 2899 49 3 0 chr17 36944288 36944633 -58328018 + ORR1A0 LTR MaLR 1 346 0 5 866 24 85 0 0 chr17 36944636 36944695 -58327956 + AT_rich Low_complexity Low_complexity 1 59 0 5 866 21 36 0 0 chr17 36944811 36944839 -58327812 + AT_rich Low_complexity Low_complexity 1 28 0 5 866 888 101 0 0 chr17 36945010 36945139 -58327512 + (GAAAA)n Simple_repeat Simple_repeat 2 130 0 5 866 29 0 0 0 chr17 36946348 36946377 -58326274 + AT_rich Low_complexity Low_complexity 1 29 0 5 866 328 203 0 0 chr17 36946492 36946561 -58326090 - ID_B1 SINE B4 -66 158 90 5 866 218 320 13 26 chr17 36946713 36946790 -58325861 - B1F2 SINE Alu -73 76 1 5 866 775 165 193 21 chr17 36947005 36947197 -58325454 + URR1B DNA MER1_type 1 225 0 5 866 274 310 39 39 chr17 36947960 36948138 -58324513 + Charlie1a DNA MER1_type 863 1040 -415 5 866 504 237 14 9 chr17 36948117 36948255 -58324396 + B1_Mur1 SINE Alu 9 144 -5 5 866 357 280 50 25 chr17 36948270 36948431 -58324220 + B3A SINE B2 34 198 0 5 866 180 0 0 0 chr17 36948500 36948520 -58324131 + (CAAAAA)n Simple_repeat Simple_repeat 2 21 0 5 866 285 322 118 0 chr17 36948624 36948835 -58323816 + Charlie1a DNA MER1_type 1220 1455 0 5 866 2448 199 136 29 chr17 36952578 36953116 -58319535 - RMER6D LTR ERVK 0 720 160 5 866 1810 199 109 44 chr17 36953116 36953311 -58319340 + RLTR31_Mm LTR ERVK 3 221 -340 5 866 957 87 58 0 chr17 36953311 36953449 -58319202 + B1_Mus1 SINE Alu 1 146 -2 5 866 1810 199 109 44 chr17 36953449 36953778 -58318873 + RLTR31_Mm LTR ERVK 222 561 0 5 866 2448 199 136 29 chr17 36953778 36953885 -58318766 - RMER6D LTR ERVK -561 159 6 5 866 658 312 0 21 chr17 36954080 36954270 -58318381 - B3 SINE B2 -7 209 24 5 866 262 257 14 0 chr17 36954324 36954398 -58318253 + (TG)n Simple_repeat Simple_repeat 2 76 0 5 866 309 276 129 21 chr17 36954437 36954591 -58318060 - B3A SINE B2 -37 179 2 5 866 294 143 0 0 chr17 36955098 36955147 -58317504 + (TCC)n Simple_repeat Simple_repeat 3 51 0 5 866 1188 111 0 0 chr17 36955169 36955349 -58317302 + (TTC)n Simple_repeat Simple_repeat 1 180 0 5 866 3196 243 90 62 chr17 36955376 36956629 -58316022 - RMER1A Other Other -1 1029 2 5 866 733 223 219 30 chr17 36956783 36957121 -58315530 + MT2A LTR ERVL 92 493 -40 5 866 234 204 0 20 chr17 36957121 36957171 -58315480 + (CATA)n Simple_repeat Simple_repeat 4 52 0 5 866 226 173 0 0 chr17 36957176 36957228 -58315423 + MT2A LTR ERVL 482 533 0 5 866 414 0 0 0 chr17 36957407 36957453 -58315198 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 866 718 268 30 0 chr17 36957456 36957654 -58314997 - RLTR14 LTR ERV1 -159 223 20 5 866 1256 239 25 30 chr17 36957792 36958155 -58314496 - RLTR11A2 LTR ERVK -24 503 143 5 866 180 158 0 0 chr17 36958158 36958196 -58314455 + T-rich Low_complexity Low_complexity 3 40 0 5 866 510 214 19 82 chr17 36958198 36958356 -58314295 - RLTR11A2 LTR ERVK -379 148 1 5 866 287 173 43 75 chr17 36958365 36958466 -58314185 + B1_Mur3 SINE Alu 26 133 -16 5 866 23 33 0 0 chr17 36958466 36958496 -58314155 + AT_rich Low_complexity Low_complexity 1 30 0 5 866 1960 164 11 11 chr17 36959360 36959717 -58312934 + RLTR15 LTR ERVK 3 359 0 5 866 1165 62 7 0 chr17 36959930 36960075 -58312576 + B1_Mus1 SINE Alu 2 147 -1 5 866 997 271 132 42 chr17 36960109 36960687 -58311964 + Lx9 LINE L1 7011 7640 -4 5 866 369 239 22 0 chr17 36960800 36960892 -58311759 + B3 SINE B2 1 94 -122 5 866 1278 185 97 10 chr17 36960894 36961205 -58311446 + RLTR30 LTR ERV1 5 342 -37 5 866 460 282 16 0 chr17 36961223 36961347 -58311304 + B3 SINE B2 90 215 -1 5 866 302 292 33 11 chr17 36961508 36961598 -58311053 + ID_B1 SINE B4 3 94 -130 5 866 245 163 20 0 chr17 36961639 36961688 -58310963 + B3A SINE B2 1 50 -148 5 866 442 257 8 50 chr17 36961875 36961940 -58310711 - MTEa LTR MaLR -3 376 317 5 866 1287 97 0 6 chr17 36961940 36962116 -58310535 + B2_Mm2 SINE B2 2 176 -19 5 866 442 257 8 50 chr17 36962116 36962169 -58310482 - MTEa LTR MaLR -63 316 263 5 108 856 137 7 7 chr17 36962181 36962329 -58310322 - RMER19B LTR ERVK 0 902 755 5 867 1155 61 7 0 chr17 36962329 36962476 -58310175 + B1_Mus1 SINE Alu 1 148 0 5 867 317 213 40 13 chr17 36962507 36962583 -58310068 - RMER19B LTR ERVK -132 770 693 5 867 567 281 108 25 chr17 36962573 36962814 -58309837 - MTEa LTR MaLR -118 261 1 5 867 603 0 0 0 chr17 36962849 36962916 -58309735 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 5 867 335 299 119 26 chr17 36963020 36963247 -58309404 - LTR41 LTR ERVL -463 305 58 5 867 1253 87 5 5 chr17 36963523 36963708 -58308943 + B2_Mm2 SINE B2 1 185 -10 5 867 1651 231 94 43 chr17 36964181 36964389 -58308262 + Lx9 LINE L1 7089 7310 -334 5 867 402 21 0 0 chr17 36964389 36964436 -58308215 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 867 1651 231 94 43 chr17 36964436 36964756 -58307895 + Lx9 LINE L1 7311 7643 -1 5 867 369 229 12 12 chr17 36964774 36964858 -58307793 - MTD LTR MaLR -44 375 292 5 867 3810 206 31 6 chr17 36964893 36965700 -58306951 + L1_Mur3 LINE L1 300 1126 -6602 5 867 400 186 0 0 chr17 36965715 36965785 -58306866 + B1_Mus2 SINE Alu 1 70 -77 5 867 558 0 0 0 chr17 36965787 36965849 -58306802 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 5 867 2297 168 62 53 chr17 36965858 36966380 -58306271 + L1_Mur3 LINE L1 1488 2011 -3869 5 867 336 48 0 0 chr17 36966380 36966422 -58306229 + (TTAA)n Simple_repeat Simple_repeat 1 42 0 5 867 2297 168 62 53 chr17 36966422 36966507 -58306144 + L1_Mur3 LINE L1 2012 2101 -3779 5 867 536 252 8 32 chr17 36966551 36966674 -58305977 - B3 SINE B2 -94 122 3 5 867 784 322 50 32 chr17 36966787 36967130 -58305521 + ORR1E LTR MaLR 1 349 -10 5 867 870 220 0 44 chr17 36967373 36967445 -58305206 + B3A SINE B2 1 72 -126 5 867 2697 122 21 47 chr17 36967445 36967910 -58304741 - RLTR11B LTR ERVK 0 453 1 5 867 870 220 0 44 chr17 36967910 36968018 -58304633 + B3A SINE B2 73 173 -25 5 867 459 204 37 55 chr17 36968116 36968225 -58304426 - B1_Mur2 SINE Alu -42 107 1 5 867 647 252 7 0 chr17 36968244 36968387 -58304264 + B1_Mur4 SINE Alu 3 146 -4 5 867 216 158 0 0 chr17 36968392 36968430 -58304221 + (CAA)n Simple_repeat Simple_repeat 2 39 0 5 867 23 78 0 0 chr17 36968784 36968835 -58303816 + AT_rich Low_complexity Low_complexity 1 51 0 5 867 2784 147 85 12 chr17 36969404 36969908 -58302743 - Lx2B LINE L1 -4 6996 6456 5 867 469 293 132 11 chr17 36969920 36970110 -58302541 - ID_B1 SINE B4 -10 214 2 5 867 332 195 288 42 chr17 36970327 36970445 -58302206 + B1F SINE Alu 2 148 -1 5 867 813 219 31 46 chr17 36970836 36971032 -58301619 + B3 SINE B2 1 193 -23 5 867 544 244 0 47 chr17 36971036 36971057 -58301594 - B1_Mus2 SINE Alu -2 145 129 5 867 2396 102 9 0 chr17 36971057 36971381 -58301270 + ORR1A2 LTR MaLR 1 327 0 5 867 544 244 0 47 chr17 36971381 36971488 -58301163 - B1_Mus2 SINE Alu -19 128 23 5 867 233 238 0 113 chr17 36971427 36971497 -58301154 - MT2B LTR ERVL -361 240 179 5 867 2947 97 122 12 chr17 36971497 36972073 -58300578 - RMER6A LTR ERVK 0 690 1 5 867 688 278 47 28 chr17 36972092 36972303 -58300348 - B3 SINE B2 -1 215 1 5 867 260 143 0 38 chr17 36972309 36972389 -58300262 + A-rich Low_complexity Low_complexity 1 77 0 5 867 496 87 13 35 chr17 36972832 36972940 -58299711 + B1_Mur2 SINE Alu 43 149 0 5 867 214 208 132 0 chr17 36973336 36973389 -58299262 - PB1D10 SINE Alu -30 87 28 5 867 393 308 16 16 chr17 36973436 36973558 -58299093 - RSINE1 SINE B4 -31 134 13 5 867 194 105 26 0 chr17 36974523 36974561 -58298090 + (TTTA)n Simple_repeat Simple_repeat 4 42 0 5 867 524 168 174 53 chr17 36974658 36974778 -58297873 + B1_Mus1 SINE Alu 1 137 -11 5 867 198 0 0 0 chr17 36974778 36974800 -58297851 + (CCCCCA)n Simple_repeat Simple_repeat 4 25 0 5 867 524 168 174 53 chr17 36974800 36974811 -58297840 + B1_Mus1 SINE Alu 138 148 0 5 867 180 0 0 0 chr17 36975019 36975039 -58297612 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 5 867 298 235 190 20 chr17 36975125 36975225 -58297426 - B1F SINE Alu -14 135 19 5 867 251 254 34 42 chr17 36975240 36975359 -58297292 - L1MC3 LINE L1 -8 7777 7660 5 867 706 22 0 0 chr17 36975784 36975875 -58296776 - B1_Mus2 SINE Alu -55 92 2 5 867 462 176 50 92 chr17 36975875 36975907 -58296744 - B4 SINE B4 -200 92 66 5 867 1904 135 54 29 chr17 36975972 36976322 -58296329 - Lx4A LINE L1 -3 7055 6697 5 867 433 258 249 24 chr17 36976329 36976666 -58295985 - L1MC3 LINE L1 -415 7370 6958 5 867 201 74 0 0 chr17 36976666 36976693 -58295958 + (TTG)n Simple_repeat Simple_repeat 1 27 0 5 867 253 231 205 65 chr17 36976693 36976758 -58295893 - L1MC3 LINE L1 -1035 6960 6896 5 867 706 247 111 20 chr17 36976846 36977044 -58295607 + B3 SINE B2 1 216 0 5 867 642 255 0 0 chr17 36977088 36977229 -58295422 + B1_Mur1 SINE Alu 2 142 -7 5 867 1147 48 7 14 chr17 36977508 36977656 -58294995 + B1_Mus2 SINE Alu 1 147 0 5 867 207 0 0 0 chr17 36977656 36977679 -58294972 + (A)n Simple_repeat Simple_repeat 1 23 0 5 867 682 258 174 54 chr17 36978290 36978663 -58293988 + MT2C_Mm LTR ERVL 1 418 -57 5 867 228 86 0 0 chr17 36978663 36978698 -58293953 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 867 339 198 21 194 chr17 36978997 36979154 -58293497 - B1_Mus2 SINE Alu -2 147 6 6 867 478 304 15 15 chr17 36979326 36979463 -58293188 + ID_B1 SINE B4 82 218 -6 6 867 189 0 0 0 chr17 36979967 36979988 -58292663 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 6 867 267 236 43 33 chr17 36980073 36980165 -58292486 - MLT1K LTR MaLR -30 565 473 6 867 249 183 50 0 chr17 36981052 36981112 -58291539 + L1ME3B LINE L1 5957 6019 -221 6 867 192 107 0 0 chr17 36981697 36981725 -58290926 + L2b LINE L2 3329 3356 -19 6 867 452 231 0 93 chr17 36981853 36981982 -58290669 - PB1D10 SINE Alu 0 117 1 6 867 423 0 0 0 chr17 36982955 36983002 -58289649 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 867 927 266 159 20 chr17 36983104 36983449 -58289202 - MTD LTR MaLR -1 418 26 6 867 412 243 10 10 chr17 36983641 36983745 -58288906 + PB1D10 SINE Alu 14 117 0 6 867 3205 58 5 8 chr17 36984146 36984543 -58288108 - MTA_Mm LTR MaLR 0 396 1 6 867 1143 74 0 0 chr17 36985089 36985237 -58287414 + B1_Mus1 SINE Alu 1 148 0 6 867 466 282 9 0 chr17 36985360 36985470 -58287181 - RSINE1 SINE B4 -52 113 3 6 867 765 159 152 76 chr17 36985735 36985932 -58286719 - B3 SINE B2 -4 212 1 6 867 217 321 48 0 chr17 36987335 36987419 -58285232 - MIRc SINE MIR -120 148 61 6 867 428 228 43 9 chr17 36989938 36990053 -58282598 - PB1D7 SINE Alu -1 119 1 6 867 367 288 40 33 chr17 36991194 36991345 -58281306 + L2a LINE L2 3274 3425 -1 6 867 276 53 0 0 chr17 36991932 36991970 -58280681 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 6 867 1265 48 0 0 chr17 36992096 36992243 -58280408 + B1_Mus2 SINE Alu 1 147 0 6 867 1262 163 5 24 chr17 36992564 36992777 -58279874 - B3 SINE B2 -6 210 2 6 867 194 307 38 51 chr17 36992801 36992880 -58279771 + L2c LINE L2 3277 3354 -33 6 867 270 279 0 0 chr17 36994546 36994704 -58277947 + GA-rich Low_complexity Low_complexity 3 160 0 6 867 361 240 94 47 chr17 36996488 36996615 -58276036 - ID_B1 SINE B4 -26 198 66 6 867 749 48 10 0 chr17 36996631 36996735 -58275916 - B1_Mus2 SINE Alu 0 147 43 6 867 334 234 39 0 chr17 36996737 36996814 -58275837 - ID4_ SINE ID -2 81 2 6 867 279 0 0 0 chr17 36997140 36997171 -58275480 + (CATA)n Simple_repeat Simple_repeat 4 34 0 6 867 252 175 0 0 chr17 36997183 36997232 -58275419 - PB1D9 SINE Alu -14 135 65 6 867 369 314 8 8 chr17 36998475 36998597 -58274054 + MER5A1 DNA MER1_type 3 124 -42 6 867 388 301 5 19 chr17 36998804 36998928 -58273723 - B1F1 SINE Alu -22 127 2 6 867 267 237 61 0 chr17 36999044 36999128 -58273523 - MIRb SINE MIR -18 250 158 6 867 333 239 204 0 chr17 36999544 36999642 -58273009 - B1F1 SINE Alu -1 116 4 6 867 254 270 0 16 chr17 36999587 36999651 -58273000 - ID_B1 SINE B4 -85 139 77 6 867 259 234 24 72 chr17 37000001 37000084 -58272567 - B3 SINE B2 -135 81 3 1 867 618 231 68 18 chr17 37000592 37000779 -58271872 + B3 SINE B2 23 215 -1 2 867 541 263 0 8 chr17 37000922 37001041 -58271610 - PB1D7 SINE Alu -2 118 1 3 867 948 236 130 86 chr17 37002393 37002778 -58269873 - MTD LTR MaLR 0 419 18 4 867 593 263 69 55 chr17 37002862 37003079 -58269572 - ID_B1 SINE B4 -1 223 4 5 867 435 193 157 1 chr17 37003081 37003203 -58269448 + ID_B1 SINE B4 87 224 0 6 867 246 32 0 0 chr17 37004562 37004593 -58268058 + (CCA)n Simple_repeat Simple_repeat 2 32 0 7 867 646 216 6 69 chr17 37005336 37005510 -58267141 + RSINE1 SINE B4 3 165 0 8 867 345 208 0 0 chr17 37005513 37005590 -58267061 + (CA)n Simple_repeat Simple_repeat 2 78 0 9 867 373 250 56 56 chr17 37005769 37005913 -58266738 - B1F2 SINE Alu -2 147 4 1 867 22 0 0 0 chr17 37006085 37006107 -58266544 + AT_rich Low_complexity Low_complexity 1 22 0 1 867 333 0 0 0 chr17 37006154 37006191 -58266460 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 1 867 255 31 0 0 chr17 37006224 37006256 -58266395 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1 867 775 222 80 11 chr17 37007786 37007973 -58264678 - ID_B1 SINE B4 -21 203 4 1 867 407 286 29 0 chr17 37008366 37008471 -58264180 + PB1D10 SINE Alu 2 109 -8 1 867 549 105 0 0 chr17 37010104 37010190 -58262461 + (TC)n Simple_repeat Simple_repeat 1 86 0 1 867 731 250 101 5 chr17 37010524 37010713 -58261938 + B3 SINE B2 1 207 -9 1 867 308 132 9 45 chr17 37010751 37010854 -58261797 + T-rich Low_complexity Low_complexity 10 108 0 1 867 1188 54 7 0 chr17 37010854 37011001 -58261650 - B1_Mus1 SINE Alu 0 148 1 1 867 49 43 0 0 chr17 37011011 37011081 -58261570 + AT_rich Low_complexity Low_complexity 1 70 0 2 867 228 261 159 0 chr17 37011625 37011694 -58260957 - ID2 SINE ID -1 82 3 2 867 210 256 25 37 chr17 37012495 37012576 -58260075 + (CATA)n Simple_repeat Simple_repeat 4 83 0 2 867 363 208 130 8 chr17 37012615 37012746 -58259905 + MER2 DNA MER2_type 90 236 -109 2 867 250 358 28 9 chr17 37014529 37014636 -58258015 + MIR3 SINE MIR 5 113 -95 2 867 1772 150 66 3 chr17 37015754 37016101 -58256550 - ORR1D1 LTR MaLR -5 369 1 2 867 818 298 38 45 chr17 37016904 37017192 -58255459 - B4A SINE B4 -4 288 3 2 867 362 242 0 95 chr17 37017244 37017349 -58255302 + ID_B1 SINE B4 115 209 -15 2 867 324 0 0 0 chr17 37017378 37017414 -58255237 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 867 185 236 205 60 chr17 37017455 37017572 -58255079 - MIRc SINE MIR -130 138 1 2 867 1335 72 0 0 chr17 37017676 37017856 -58254795 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 867 567 205 0 9 chr17 37017875 37017988 -58254663 - B1_Mus1 SINE Alu 0 148 37 3 867 632 269 10 112 chr17 37017987 37018192 -58254459 - B3 SINE B2 -11 184 1 3 867 270 366 46 0 chr17 37018893 37019024 -58253627 - MLT1F2 LTR MaLR -423 137 1 3 867 489 76 0 0 chr17 37019779 37019845 -58252806 + (CA)n Simple_repeat Simple_repeat 2 67 0 3 867 206 128 26 0 chr17 37019934 37019973 -58252678 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 867 756 182 41 14 chr17 37021099 37021244 -58251407 + B1_Mur1 SINE Alu 1 149 0 3 867 808 259 16 27 chr17 37021255 37021438 -58251213 + B3A SINE B2 5 185 -13 3 867 632 284 39 49 chr17 37021565 37021769 -58250882 - B3A SINE B2 0 216 15 3 867 339 177 0 0 chr17 37021792 37021888 -58250763 + CT-rich Low_complexity Low_complexity 2 97 0 3 867 312 48 0 0 chr17 37021879 37021921 -58250730 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 867 363 239 90 18 chr17 37021921 37022032 -58250619 - PB1D9 SINE Alu -1 119 1 4 867 342 268 0 0 chr17 37022729 37022811 -58249840 + ID4 SINE ID 2 83 0 4 867 414 291 39 0 chr17 37023515 37023618 -58249033 + PB1D7 SINE Alu 1 107 -13 4 867 899 222 113 0 chr17 37023639 37023833 -58248818 + B3 SINE B2 1 216 0 4 867 308 304 0 12 chr17 37024074 37024154 -58248497 + polypurine Low_complexity Low_complexity 2 80 0 4 867 673 279 0 0 chr17 37024506 37024664 -58247987 + RSINE1 SINE B4 2 159 -6 4 867 363 282 0 0 chr17 37024698 37024776 -58247875 - ID4_ SINE ID -1 82 5 4 867 303 93 0 0 chr17 37024816 37024859 -58247792 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 867 378 298 10 0 chr17 37025047 37025151 -58247500 - RSINE1 SINE B4 -37 128 24 4 867 406 97 42 0 chr17 37026700 37026772 -58245879 + (GGGA)n Simple_repeat Simple_repeat 2 76 0 5 867 210 71 0 0 chr17 37026837 37026865 -58245786 + (TCC)n Simple_repeat Simple_repeat 2 29 0 5 867 1171 255 22 65 chr17 37027385 37027741 -58244910 - MTEa LTR MaLR -1 378 38 5 867 387 0 0 0 chr17 37027964 37028007 -58244644 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 867 978 210 87 0 chr17 37028015 37028210 -58244441 - ID_B1 SINE B4 -10 214 3 5 867 2968 68 47 3 chr17 37028456 37028839 -58243812 + MTB LTR MaLR 1 400 0 5 867 747 42 0 0 chr17 37029548 37029643 -58243008 + (TC)n Simple_repeat Simple_repeat 2 96 0 5 867 663 228 55 7 chr17 37029656 37029802 -58242849 - B3A SINE B2 -41 157 5 5 867 462 305 40 51 chr17 37029843 37029937 -58242714 + B4A SINE B4 1 92 -200 5 867 230 297 30 81 chr17 37029937 37030036 -58242615 + PB1D10 SINE Alu 1 94 -23 5 867 188 135 0 26 chr17 37030133 37030171 -58242480 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 867 684 263 51 11 chr17 37030206 37030383 -58242268 + ID_B1 SINE B4 12 195 -29 6 867 289 258 96 67 chr17 37030761 37030865 -58241786 + ID_B1 SINE B4 92 198 -26 6 867 293 200 24 36 chr17 37031464 37031547 -58241104 + Arthur1B DNA Tip100 49 130 -1095 6 867 382 71 14 41 chr17 37031532 37031548 -58241103 - B2_Mm2 SINE B2 -7 188 172 6 867 225 0 0 0 chr17 37031548 37031573 -58241078 + (TA)n Simple_repeat Simple_repeat 2 26 0 6 867 306 0 0 0 chr17 37031573 37031606 -58241045 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 867 382 71 14 41 chr17 37031606 37031661 -58240990 - B2_Mm2 SINE B2 -24 171 119 6 867 1092 82 14 0 chr17 37031678 37031824 -58240827 - B1_Mus1 SINE Alu 0 148 1 6 867 223 108 54 0 chr17 37031824 37031861 -58240790 - B3 SINE B2 -176 40 2 6 867 566 291 6 17 chr17 37032330 37032508 -58240143 + B3A SINE B2 5 180 -18 6 867 446 126 52 112 chr17 37032623 37032739 -58239912 - URR1B DNA MER1_type 0 225 117 7 867 1064 78 78 0 chr17 37032859 37033025 -58239626 - B2_Mm2 SINE B2 -16 179 1 7 867 222 245 0 0 chr17 37033322 37033371 -58239280 - ID_B1 SINE B4 -77 147 99 7 867 198 103 0 0 chr17 37033485 37033514 -58239137 + (A)n Simple_repeat Simple_repeat 1 29 0 7 867 959 195 84 5 chr17 37033602 37033793 -58238858 + B3 SINE B2 1 206 -10 7 867 31 58 0 0 chr17 37033817 37033869 -58238782 + AT_rich Low_complexity Low_complexity 1 52 0 7 867 265 59 0 0 chr17 37033980 37034014 -58238637 - U2 snRNA snRNA -152 36 3 7 867 334 202 25 0 chr17 37034086 37034165 -58238486 - MER94 DNA AcHobo -32 102 22 7 867 687 219 254 0 chr17 37034227 37034428 -58238223 + Lx8 LINE L1 7064 7315 -158 7 867 231 36 0 0 chr17 37034429 37034457 -58238194 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 867 318 287 7 148 chr17 37035912 37036047 -58236604 + RSINE1 SINE B4 2 117 -48 8 867 405 70 0 0 chr17 37036047 37036104 -58236547 + (CA)n Simple_repeat Simple_repeat 1 57 0 8 867 1385 195 37 11 chr17 37036162 37036432 -58236219 - Lx2B LINE L1 -4 6996 6720 8 867 331 316 61 81 chr17 37037293 37037441 -58235210 - B3A SINE B2 0 198 54 8 867 483 33 0 0 chr17 37037676 37037737 -58234914 + (TTTA)n Simple_repeat Simple_repeat 4 64 0 8 867 404 282 230 23 chr17 37037740 37037914 -58234737 - B3 SINE B2 -6 210 1 8 867 707 249 60 10 chr17 37037915 37038114 -58234537 - ID_B1 SINE B4 -13 211 3 8 867 587 226 80 0 chr17 37038372 37038509 -58234142 + B1_Mur1 SINE Alu 2 149 0 8 867 650 72 10 0 chr17 37038849 37038946 -58233705 + (TC)n Simple_repeat Simple_repeat 1 98 0 8 867 243 0 0 0 chr17 37038946 37038972 -58233679 + (CA)n Simple_repeat Simple_repeat 1 27 0 8 867 1117 85 95 24 chr17 37039352 37039521 -58233130 - B2_Mm2 SINE B2 -14 181 1 9 867 258 30 0 0 chr17 37039550 37039565 -58233086 + (T)n Simple_repeat Simple_repeat 1 15 0 9 867 1205 48 0 0 chr17 37039565 37039712 -58232939 - B1_Mm SINE Alu 0 147 1 9 867 258 30 0 0 chr17 37039712 37039729 -58232922 + (T)n Simple_repeat Simple_repeat 1 17 0 9 867 1327 136 9 31 chr17 37039783 37040010 -58232641 + URR1B DNA MER1_type 1 222 -3 9 867 242 293 40 0 chr17 37040024 37040099 -58232552 + PB1D7 SINE Alu 36 113 -7 9 867 2267 120 9 0 chr17 37040114 37040440 -58232211 + ORR1A4 LTR MaLR 1 329 0 9 867 220 102 41 0 chr17 37040525 37040574 -58232077 + (CCA)n Simple_repeat Simple_repeat 3 53 0 9 867 416 298 72 36 chr17 37040634 37040801 -58231850 - ID_B1 SINE B4 0 224 52 9 867 431 297 0 0 chr17 37040826 37040954 -58231697 + RSINE1 SINE B4 1 128 -37 9 867 245 189 75 206 chr17 37040875 37041035 -58231616 + B3A SINE B2 49 187 -11 1 867 56 55 0 0 chr17 37041038 37041129 -58231522 + AT_rich Low_complexity Low_complexity 1 91 0 1 867 607 209 93 0 chr17 37041178 37041307 -58231344 + B1_Mur1 SINE Alu 7 147 -2 1 867 389 187 99 105 chr17 37041297 37041488 -58231163 - Charlie5 DNA MER1_type -77 2547 2358 1 867 281 220 52 52 chr17 37041492 37041607 -58231044 - Charlie5 DNA MER1_type -2424 200 86 1 867 230 309 0 58 chr17 37041612 37041693 -58230958 + PB1D10 SINE Alu 5 80 -37 1 867 555 63 0 0 chr17 37041693 37041772 -58230879 + B2_Mm2 SINE B2 2 80 -115 1 867 260 350 0 0 chr17 37041772 37041788 -58230863 + RSINE1 SINE B4 3 97 -68 1 867 449 194 10 20 chr17 37042072 37042254 -58230397 + GA-rich Low_complexity Low_complexity 1 180 0 1 867 216 0 0 0 chr17 37042327 37042351 -58230300 + (TTTC)n Simple_repeat Simple_repeat 4 27 0 1 867 323 276 124 0 chr17 37043417 37043522 -58229129 - PB1 SINE Alu -7 120 3 1 867 22 88 0 0 chr17 37043577 37043634 -58229017 + AT_rich Low_complexity Low_complexity 1 57 0 1 867 642 197 172 43 chr17 37043634 37043820 -58228831 - B3 SINE B2 -6 210 1 1 867 338 255 102 0 chr17 37043830 37043928 -58228723 - B1F SINE Alu -6 143 36 1 867 423 0 0 0 chr17 37045494 37045541 -58227110 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 867 383 226 10 0 chr17 37045643 37045745 -58226906 + (CATA)n Simple_repeat Simple_repeat 2 104 0 1 867 350 277 0 14 chr17 37045745 37045884 -58226767 + (TG)n Simple_repeat Simple_repeat 1 137 0 1 867 277 226 9 9 chr17 37045895 37046011 -58226640 + (TG)n Simple_repeat Simple_repeat 2 117 0 1 867 2272 167 80 50 chr17 37047349 37047890 -58224761 + RLTR31B_Mm LTR ERVK 1 557 0 1 867 377 167 0 0 chr17 37047890 37047956 -58224695 + ORR1A2 LTR MaLR 262 327 0 1 867 667 162 0 0 chr17 37048342 37048447 -58224204 - B1_Mus1 SINE Alu -43 105 1 1 867 1465 55 16 0 chr17 37048471 37048653 -58223998 - B2_Mm2 SINE B2 -9 186 2 1 867 373 269 9 9 chr17 37048927 37049043 -58223608 - B1_Mur2 SINE Alu -19 130 15 1 867 669 268 11 37 chr17 37049591 37049636 -58223015 - ID_B1 SINE B4 -25 199 160 1 867 2255 174 58 40 chr17 37049636 37050132 -58222519 + RLTR16 LTR ERVK 1 505 0 1 867 669 268 11 37 chr17 37050132 37050276 -58222375 - ID_B1 SINE B4 -65 159 15 1 867 316 288 109 40 chr17 37050289 37050463 -58222188 - B3A SINE B2 -2 193 8 1 867 186 133 0 0 chr17 37050482 37050512 -58222139 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 867 213 39 0 0 chr17 37051506 37051532 -58221119 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1 867 674 177 48 0 chr17 37051536 37051660 -58220991 - B1_Mur2 SINE Alu -15 134 5 1 867 361 303 23 8 chr17 37052251 37052384 -58220267 + ID_B1 SINE B4 89 223 -1 1 867 201 164 0 76 chr17 37052436 37052502 -58220149 + A-rich Low_complexity Low_complexity 4 64 0 1 867 2118 155 67 121 chr17 37052587 37053139 -58219512 + RLTR24 LTR ERV1 8 529 0 1 867 365 0 22 0 chr17 37053845 37053890 -58218761 + (TTTTC)n Simple_repeat Simple_repeat 3 48 0 1 867 530 222 57 43 chr17 37053891 37054032 -58218619 - B1_Mur2 SINE Alu -1 148 6 1 867 1159 134 119 0 chr17 37054089 37054290 -58218361 + URR1A DNA MER1_type 1 225 -1 1 867 589 219 0 8 chr17 37054294 37054414 -58218237 - B1_Mur2 SINE Alu -30 119 1 1 867 290 323 40 8 chr17 37054304 37054429 -58218222 - B4 SINE B4 -94 198 70 1 867 263 331 0 8 chr17 37054754 37054879 -58217772 + RMER30 DNA MER1_type 8 131 -71 1 867 226 268 0 0 chr17 37055108 37055164 -58217487 - ID SINE ID -161 63 8 1 867 577 266 39 74 chr17 37055343 37055546 -58217105 - B3A SINE B2 -1 197 2 1 867 26 0 0 0 chr17 37055568 37055594 -58217057 + AT_rich Low_complexity Low_complexity 1 26 0 1 867 305 309 15 0 chr17 37056012 37056080 -58216571 - RSINE1 SINE B4 -94 71 3 1 867 365 279 158 18 chr17 37056147 37056311 -58216340 - B3 SINE B2 -7 188 2 1 867 997 144 0 0 chr17 37056350 37056496 -58216155 + B1_Mus1 SINE Alu 3 148 0 1 867 237 247 11 38 chr17 37056677 37056766 -58215885 - L1_Mm LINE L1 -3175 2705 2624 1 867 253 211 123 0 chr17 37057672 37057729 -58214922 - RSINE1 SINE B4 -98 67 4 1 867 549 304 90 0 chr17 37057732 37057933 -58214718 - ID_B1 SINE B4 -4 220 2 1 867 703 300 121 79 chr17 37057942 37058297 -58214354 - MTEa LTR MaLR -9 370 1 1 867 508 300 35 7 chr17 37059840 37059981 -58212670 - RSINE1 SINE B4 -19 146 2 1 867 735 238 30 60 chr17 37060073 37060274 -58212377 - B3A SINE B2 0 198 4 1 867 367 248 38 9 chr17 37060279 37060385 -58212266 - PB1D10 SINE Alu 0 117 9 1 867 359 245 84 11 chr17 37060304 37060399 -58212252 - ID_B1 SINE B4 -54 170 69 1 867 429 183 125 0 chr17 37060614 37060718 -58211933 - RMER21A LTR ERV1 -411 536 420 1 867 342 169 0 0 chr17 37061091 37061156 -58211495 + T-rich Low_complexity Low_complexity 1 65 0 1 867 528 262 79 0 chr17 37061170 37061296 -58211355 - B1F2 SINE Alu -8 141 6 1 867 846 204 7 0 chr17 37061302 37061444 -58211207 - B1_Mur2 SINE Alu -1 148 6 1 867 840 346 19 0 chr17 37061512 37061769 -58210882 + B4A SINE B4 31 292 0 1 867 21 0 0 0 chr17 37061804 37061825 -58210826 + AT_rich Low_complexity Low_complexity 1 21 0 1 867 639 283 31 36 chr17 37061829 37062023 -58210628 + B3A SINE B2 6 198 0 1 867 688 306 78 92 chr17 37062041 37062325 -58210326 + MTEb LTR MaLR 92 371 -8 1 867 1386 36 0 0 chr17 37062415 37062583 -58210068 + (TTCC)n Simple_repeat Simple_repeat 1 168 0 1 867 513 315 39 0 chr17 37062921 37063048 -58209603 - ID_B1 SINE B4 -9 215 84 1 867 214 338 73 29 chr17 37063183 37063320 -58209331 + L2a LINE L2 3277 3419 -7 1 867 479 322 77 53 chr17 37063558 37063935 -58208716 - MER90a LTR ERV1 -146 468 83 1 867 297 254 14 29 chr17 37063989 37064058 -58208593 - B4A SINE B4 -215 77 10 1 867 473 115 0 13 chr17 37064278 37064357 -58208294 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 1 867 591 189 9 9 chr17 37064369 37064476 -58208175 - B3 SINE B2 -108 108 2 1 867 259 226 0 0 chr17 37065095 37065148 -58207503 + CT-rich Low_complexity Low_complexity 3 55 0 1 867 1079 81 17 11 chr17 37065159 37065333 -58207318 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 1 867 260 304 43 0 chr17 37065337 37065406 -58207245 - B1F SINE Alu -75 74 3 1 867 477 0 0 0 chr17 37065427 37065480 -58207171 + (TC)n Simple_repeat Simple_repeat 1 53 0 1 867 317 239 14 8 chr17 37066476 37066550 -58206101 + PB1 SINE Alu 3 73 -54 1 867 25 0 0 0 chr17 37066550 37066575 -58206076 + AT_rich Low_complexity Low_complexity 1 25 0 1 867 332 297 0 0 chr17 37066916 37066990 -58205661 - ID4 SINE ID -9 74 1 1 867 276 30 0 0 chr17 37067167 37067200 -58205451 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 867 445 261 0 0 chr17 37067568 37067656 -58204995 + ID_B1 SINE B4 82 169 -55 1 867 396 267 59 0 chr17 37067656 37067669 -58204982 + B1F1 SINE Alu 1 107 -42 1 867 441 54 0 0 chr17 37067678 37067734 -58204917 + (TGG)n Simple_repeat Simple_repeat 2 57 0 1 867 297 220 264 0 chr17 37067825 37067916 -58204735 - PB1D9 SINE Alu -1 119 5 1 867 345 100 0 0 chr17 37067933 37067983 -58204668 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 867 193 358 92 61 chr17 37068185 37068316 -58204335 + MIRb SINE MIR 81 215 -53 1 867 359 281 10 10 chr17 37069564 37069668 -58202983 - PB1D7 SINE Alu -16 104 1 1 867 432 225 153 42 chr17 37069705 37069849 -58202802 - B3 SINE B2 -9 207 48 1 867 188 313 129 24 chr17 37069875 37070045 -58202606 + L2c LINE L2 2488 2675 -744 1 867 1338 112 5 0 chr17 37070445 37070633 -58202018 + B2_Mm1t SINE B2 1 189 -4 1 867 793 206 0 0 chr17 37070883 37071019 -58201632 + B1_Mur4 SINE Alu 14 149 -1 1 867 230 333 109 0 chr17 37071365 37071503 -58201148 + L2c LINE L2 3005 3157 -230 1 867 428 254 45 0 chr17 37071557 37071667 -58200984 + PB1D10 SINE Alu 2 116 -1 1 867 268 236 117 11 chr17 37071678 37071772 -58200879 - MER53 DNA hAT -9 184 81 1 867 241 222 111 0 chr17 37071805 37071877 -58200774 - MER53 DNA hAT 0 193 114 1 867 1318 43 0 0 chr17 37072148 37072309 -58200342 + B2_Mm2 SINE B2 1 161 -34 1 867 198 0 0 0 chr17 37072309 37072331 -58200320 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 1 867 327 331 22 7 chr17 37072357 37072494 -58200157 + LTR33B LTR ERVL 365 503 0 1 867 264 266 0 15 chr17 37072565 37072630 -58200021 - ID4_ SINE ID -18 65 2 1 867 436 336 89 21 chr17 37073167 37073504 -58199147 + L2a LINE L2 3061 3420 -6 1 867 195 42 0 0 chr17 37074709 37074733 -58197918 + (TC)n Simple_repeat Simple_repeat 1 24 0 1 867 216 360 61 9 chr17 37075200 37075315 -58197336 - L2a LINE L2 -38 3388 3268 1 867 434 235 137 0 chr17 37075405 37075507 -58197144 + B3A SINE B2 1 116 -82 1 867 288 0 0 0 chr17 37075581 37075613 -58197038 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1 867 328 291 0 0 chr17 37075635 37075714 -58196937 + ID4_ SINE ID 1 79 -4 1 867 206 389 63 26 chr17 37075718 37075908 -58196743 - L2a LINE L2 -273 3153 2957 1 867 314 349 38 8 chr17 37075949 37076082 -58196569 - MER5B DNA MER1_type -41 137 1 1 867 624 222 27 20 chr17 37076222 37076369 -58196282 + B1_Mur2 SINE Alu 1 148 -1 1 867 236 149 21 0 chr17 37076369 37076416 -58196235 + GA-rich Low_complexity Low_complexity 1 48 0 1 867 408 234 64 18 chr17 37076546 37076655 -58195996 + B1F SINE Alu 23 136 -13 1 867 1253 34 0 0 chr17 37076658 37076804 -58195847 - B1_Mm SINE Alu 0 147 2 2 867 256 154 0 37 chr17 37076897 37076951 -58195700 - MLT1D LTR MaLR 0 505 454 2 867 303 28 0 0 chr17 37077119 37077155 -58195496 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 867 512 275 16 16 chr17 37077173 37077295 -58195356 - B3A SINE B2 -75 123 2 2 867 455 292 0 0 chr17 37077296 37077433 -58195218 - MLT1D LTR MaLR -61 444 308 2 867 698 275 26 57 chr17 37077479 37077514 -58195137 + B3A SINE B2 1 32 -166 2 867 1990 190 79 8 chr17 37077514 37077907 -58194744 - MTC LTR MaLR 0 421 1 2 867 698 275 26 57 chr17 37077907 37078064 -58194587 + B3A SINE B2 33 187 -11 2 867 195 42 0 0 chr17 37078064 37078088 -58194563 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 867 550 209 27 0 chr17 37078375 37078485 -58194166 - PB1D7 SINE Alu -6 114 2 2 867 230 346 15 8 chr17 37078934 37079068 -58193583 + GA-rich Low_complexity Low_complexity 5 139 0 2 867 477 0 0 0 chr17 37079236 37079289 -58193362 + (GA)n Simple_repeat Simple_repeat 1 53 0 2 867 321 221 167 10 chr17 37080501 37080597 -58192054 + B1F2 SINE Alu 11 121 -28 2 867 540 30 0 0 chr17 37081001 37081067 -58191584 + (TG)n Simple_repeat Simple_repeat 2 67 0 2 867 641 286 82 85 chr17 37082526 37082843 -58189808 - MLT1B LTR MaLR -1 389 74 2 867 244 341 33 0 chr17 37082927 37083018 -58189633 - PB1D10 SINE Alu -21 96 3 2 867 705 173 97 8 chr17 37083555 37083689 -58188962 - B1_Mur1 SINE Alu 0 149 4 2 867 21 0 0 0 chr17 37087355 37087376 -58185275 + AT_rich Low_complexity Low_complexity 1 21 0 2 867 521 222 147 123 chr17 37087379 37087573 -58185078 + B4 SINE B4 2 202 -90 2 867 222 37 0 0 chr17 37087573 37087600 -58185051 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 2 867 521 222 147 123 chr17 37087600 37087616 -58185035 + B4 SINE B4 203 217 -75 2 867 225 0 0 0 chr17 37087639 37087664 -58184987 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 867 282 29 0 0 chr17 37089435 37089470 -58183181 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 867 765 186 28 7 chr17 37089472 37089613 -58183038 - B1_Mus1 SINE Alu 0 148 5 2 867 3338 138 25 2 chr17 37089639 37090155 -58182496 - Lx4A LINE L1 -9 7049 6522 2 867 3412 141 74 10 chr17 37090159 37090754 -58181897 + Lx4A LINE L1 5872 6504 -554 2 867 319 198 154 8 chr17 37091734 37091851 -58180800 + L1MEd LINE L1 681 814 -5305 2 867 1113 221 5 0 chr17 37091913 37092121 -58180530 + B3 SINE B2 1 209 -7 2 867 239 296 191 96 chr17 37092212 37092421 -58180230 + B4 SINE B4 1 229 -63 2 867 659 250 37 0 chr17 37092422 37092558 -58180093 + B1_Mur1 SINE Alu 1 141 -8 2 867 262 346 59 65 chr17 37092558 37092584 -58180067 + B4A SINE B4 112 246 -46 2 867 548 74 0 24 chr17 37092586 37092669 -58179982 + (GGGA)n Simple_repeat Simple_repeat 4 84 0 2 867 265 242 220 15 chr17 37092804 37093008 -58179643 + L1MEd LINE L1 985 1230 -4889 2 867 598 229 62 0 chr17 37093022 37093166 -58179485 + ID_B1 SINE B4 1 153 -71 2 868 260 111 185 0 chr17 37093502 37093556 -58179095 - PB1D10 SINE Alu -1 116 53 2 868 647 235 57 36 chr17 37093642 37093836 -58178815 + B3A SINE B2 1 198 0 2 868 533 312 35 21 chr17 37093849 37093993 -58178658 + B1F SINE Alu 1 146 -3 2 868 1109 101 0 20 chr17 37094000 37094151 -58178500 + B1_Mus1 SINE Alu 1 148 0 2 868 232 84 0 101 chr17 37094179 37094229 -58178422 + A-rich Low_complexity Low_complexity 2 46 0 2 868 1076 29 57 14 chr17 37094229 37094369 -58178282 + B1_Mus2 SINE Alu 2 147 0 2 868 232 84 0 101 chr17 37094369 37094397 -58178254 + A-rich Low_complexity Low_complexity 47 72 0 2 868 205 65 0 80 chr17 37095845 37095895 -58176756 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 2 868 1138 69 7 0 chr17 37096582 37096726 -58175925 + B1_Mus2 SINE Alu 2 146 -1 2 868 459 305 38 0 chr17 37097206 37097337 -58175314 + B1F SINE Alu 7 142 -7 2 868 1054 187 44 25 chr17 37097553 37097756 -58174895 + B3 SINE B2 2 208 -8 2 868 425 198 112 9 chr17 37097796 37097903 -58174748 - PB1D7 SINE Alu -2 118 1 2 868 283 0 23 45 chr17 37097918 37097962 -58174689 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 868 1056 87 0 0 chr17 37097962 37098100 -58174551 - B1_Mus1 SINE Alu -9 139 2 2 868 738 207 106 72 chr17 37098145 37098353 -58174298 + B3 SINE B2 2 216 0 2 868 990 231 25 20 chr17 37098533 37098736 -58173915 - B3 SINE B2 -10 206 3 2 868 2080 238 143 45 chr17 37098763 37099000 -58173651 - Lx6 LINE L1 -20 7440 7167 2 868 225 65 0 0 chr17 37099000 37099031 -58173620 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 868 2080 238 143 45 chr17 37099031 37099230 -58173421 - Lx6 LINE L1 -294 7166 6965 2 868 1421 84 16 0 chr17 37099230 37099420 -58173231 - B2_Mm1t SINE B2 0 193 1 2 868 2080 238 143 45 chr17 37099420 37099599 -58173052 - Lx6 LINE L1 -496 6964 6746 2 868 764 176 42 14 chr17 37099599 37099743 -58172908 - B1_Mur4 SINE Alu 0 150 3 2 868 2080 238 143 45 chr17 37099743 37099811 -58172840 - Lx6 LINE L1 -715 6745 6692 2 868 829 215 158 0 chr17 37099855 37100032 -58172619 - B3 SINE B2 -11 205 1 2 868 1171 48 7 0 chr17 37100161 37100306 -58172345 + B1_Mus2 SINE Alu 2 147 0 2 868 225 0 0 0 chr17 37100306 37100331 -58172320 + (A)n Simple_repeat Simple_repeat 1 25 0 2 868 312 365 112 14 chr17 37100375 37100589 -58172062 - MIRb SINE MIR -8 260 26 2 868 300 53 0 0 chr17 37101978 37102016 -58170635 + (CCA)n Simple_repeat Simple_repeat 3 40 0 2 868 424 191 144 31 chr17 37102649 37102746 -58169905 - B1_Mus1 SINE Alu -37 111 4 2 868 1156 101 70 32 chr17 37102807 37102992 -58169659 - B2_Mm2 SINE B2 -2 193 2 2 868 315 0 0 0 chr17 37103182 37103217 -58169434 + (TC)n Simple_repeat Simple_repeat 2 36 0 2 868 357 219 279 8 chr17 37103217 37103346 -58169305 - RSINE1 SINE B4 -1 164 1 2 868 3051 59 23 20 chr17 37103525 37103924 -58168727 + MTB LTR MaLR 1 400 0 2 868 1169 252 68 60 chr17 37104261 37104628 -58168023 - MTEb LTR MaLR -9 370 1 2 868 260 116 0 65 chr17 37104628 37104658 -58167993 + ID_B1 SINE B4 167 193 -31 2 868 252 0 0 0 chr17 37104666 37104694 -58167957 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 2 868 1332 94 5 25 chr17 37105049 37105245 -58167406 - B2_Mm1a SINE B2 -1 192 1 2 868 741 209 0 15 chr17 37105831 37105967 -58166684 + B1_Mus2 SINE Alu 1 134 -13 2 868 336 83 0 0 chr17 37105967 37106015 -58166636 + (CAA)n Simple_repeat Simple_repeat 1 48 0 2 868 237 290 91 27 chr17 37108700 37108810 -58163841 - Charlie1b DNA MER1_type -4 519 403 2 868 1249 41 0 0 chr17 37108816 37108962 -58163689 + B1_Mm SINE Alu 2 147 0 2 868 273 125 0 0 chr17 37108962 37109018 -58163633 + (A)n Simple_repeat Simple_repeat 1 56 0 2 868 1356 89 0 26 chr17 37109024 37109219 -58163432 + B2_Mm2 SINE B2 2 191 -4 2 868 609 285 54 25 chr17 37109358 37109599 -58163052 - MER34-int LTR ERV1 -4938 3269 3022 2 868 1712 161 144 105 chr17 37110080 37110509 -58162142 - RLTR41 LTR ERV1 0 446 1 2 868 521 196 104 26 chr17 37110519 37110634 -58162017 - B1_Mur2 SINE Alu 0 149 26 2 868 916 195 0 35 chr17 37110968 37111138 -58161513 + RSINE1 SINE B4 2 165 0 2 868 304 136 51 0 chr17 37111168 37111227 -58161424 + PB1D9 SINE Alu 42 103 -17 2 868 227 277 0 84 chr17 37112008 37112079 -58160572 + ID_B1 SINE B4 121 185 -39 2 868 311 273 0 0 chr17 37112279 37112345 -58160306 - PB1D10 SINE Alu -48 69 4 2 868 1024 299 88 3 chr17 37112436 37112741 -58159910 - MLT1A0 LTR MaLR -8 357 27 2 868 306 0 0 0 chr17 37113302 37113336 -58159315 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 868 525 158 82 156 chr17 37113347 37113482 -58159169 - B1_Mur1 SINE Alu -7 142 18 2 868 204 158 0 0 chr17 37113616 37113654 -58158997 + C-rich Low_complexity Low_complexity 1 38 0 2 868 212 0 36 0 chr17 37113871 37113899 -58158752 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 868 877 224 121 79 chr17 37113899 37114229 -58158422 - MTEb LTR MaLR -35 344 1 2 868 241 204 37 0 chr17 37114229 37114283 -58158368 + B1F SINE Alu 86 141 -8 2 868 189 0 0 0 chr17 37115233 37115254 -58157397 + (A)n Simple_repeat Simple_repeat 1 21 0 2 868 472 250 101 27 chr17 37116235 37116383 -58156268 - RSINE1 SINE B4 -4 161 3 2 868 619 242 31 0 chr17 37116388 37116516 -58156135 - RMER15-int LTR ERVL -3902 1097 966 2 868 710 236 70 87 chr17 37116906 37117147 -58155504 - RMER15 LTR ERVL -14 561 325 2 868 198 0 0 0 chr17 37117176 37117198 -58155453 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 868 544 224 0 0 chr17 37117208 37117315 -58155336 - B1_Mus2 SINE Alu -36 111 5 2 868 240 331 11 108 chr17 37117315 37117375 -58155276 - MT2B LTR ERVL -328 254 115 2 868 342 321 45 0 chr17 37119699 37119811 -58152840 - Charlie1 DNA MER1_type -7 2774 2658 2 868 251 197 90 90 chr17 37119818 37119851 -58152800 + B3A SINE B2 57 95 -103 2 868 1626 181 108 22 chr17 37119851 37120258 -58152393 + RMER10A LTR ERVL 1 442 0 2 868 251 197 90 90 chr17 37120258 37120291 -58152360 + B3A SINE B2 96 123 -75 2 868 574 208 268 0 chr17 37120467 37120635 -58152016 - B3 SINE B2 -3 213 1 2 868 195 69 0 0 chr17 37120681 37120710 -58151941 + (T)n Simple_repeat Simple_repeat 1 29 0 2 868 1307 73 6 6 chr17 37120740 37120920 -58151731 - L1_Mus1 LINE L1 0 6567 6388 2 868 23 78 0 0 chr17 37121124 37121175 -58151476 + AT_rich Low_complexity Low_complexity 1 51 0 2 868 376 224 26 57 chr17 37121175 37121296 -58151355 + PB1D7 SINE Alu 13 129 -20 2 868 458 123 0 0 chr17 37121314 37121387 -58151264 + B1_Mur4 SINE Alu 77 149 -1 2 868 308 170 223 138 chr17 37121706 37121836 -58150815 + B3 SINE B2 1 141 -75 2 868 489 267 99 55 chr17 37121800 37122002 -58150649 - MTEa LTR MaLR -168 211 1 2 868 314 155 86 0 chr17 37122002 37122060 -58150591 + B1F SINE Alu 86 148 -1 3 868 424 244 236 30 chr17 37122070 37122235 -58150416 + B3 SINE B2 3 201 -15 3 868 714 247 68 5 chr17 37122287 37122478 -58150173 + B3 SINE B2 3 205 -11 3 868 1201 48 7 0 chr17 37122489 37122635 -58150016 + B1_Mus1 SINE Alu 1 147 -1 3 868 288 0 0 0 chr17 37122638 37122670 -58149981 + (TAA)n Simple_repeat Simple_repeat 3 34 0 3 868 1264 99 11 16 chr17 37122679 37122836 -58149815 + B2_Mm2 SINE B2 2 158 -37 3 868 500 0 17 0 chr17 37122836 37122896 -58149755 + (TA)n Simple_repeat Simple_repeat 1 61 0 3 868 1264 99 11 16 chr17 37122896 37122923 -58149728 + B2_Mm2 SINE B2 159 184 -11 3 868 323 24 0 0 chr17 37123303 37123345 -58149306 - B1_Mm SINE Alu 0 147 106 3 868 980 65 42 21 chr17 37124174 37124316 -58148335 + B1_Mm SINE Alu 3 147 0 3 868 207 0 0 0 chr17 37126172 37126195 -58146456 + (T)n Simple_repeat Simple_repeat 1 23 0 3 868 240 300 103 65 chr17 37126740 37126847 -58145804 - Charlie1b DNA MER1_type -1 522 412 3 868 1019 63 2 22 chr17 37126845 37127009 -58145642 - B2_Mm2 SINE B2 -8 187 28 3 868 243 309 12 47 chr17 37127247 37127332 -58145319 - B1F2 SINE Alu -56 93 12 3 868 1207 48 0 7 chr17 37127349 37127497 -58145154 + B1_Mus1 SINE Alu 2 148 0 3 868 1319 20 0 0 chr17 37127559 37127706 -58144945 - B1_Mus2 SINE Alu 0 147 1 3 868 343 245 20 20 chr17 37127706 37127806 -58144845 - B3 SINE B2 -1 215 116 3 868 407 209 35 87 chr17 37127811 37127926 -58144725 + B2_Mm2 SINE B2 64 172 -23 3 868 498 277 58 6 chr17 37127993 37128149 -58144502 - MER34-int LTR ERV1 -3932 4275 4112 3 868 2429 119 74 25 chr17 37128152 37128458 -58144193 + Lx4A LINE L1 6633 6944 -114 3 868 279 0 0 0 chr17 37128458 37128489 -58144162 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 868 2429 119 74 25 chr17 37128489 37128586 -58144065 + Lx4A LINE L1 6945 7056 -2 3 868 1194 275 82 13 chr17 37128729 37129119 -58143532 - MER34-int LTR ERV1 -4265 3942 3526 3 868 1151 286 77 51 chr17 37129134 37129767 -58142884 - MER34-int LTR ERV1 -4762 3445 2796 3 868 805 252 43 24 chr17 37130003 37130210 -58142441 - B3 SINE B2 0 216 6 3 868 1342 85 11 0 chr17 37130238 37130414 -58142237 + B2_Mm1t SINE B2 2 179 -14 3 868 307 226 200 0 chr17 37130461 37130576 -58142075 + B2_Mm2 SINE B2 47 184 -11 3 868 837 172 45 0 chr17 37130591 37130725 -58141926 + B1_Mus1 SINE Alu 2 141 -7 3 868 318 26 0 0 chr17 37130725 37130764 -58141887 + (CATA)n Simple_repeat Simple_repeat 4 42 0 3 868 427 192 354 0 chr17 37130778 37130877 -58141774 + B1_Mur2 SINE Alu 1 134 -15 3 868 588 268 57 107 chr17 37130990 37131374 -58141277 + RMER10A LTR ERVL 77 441 -1 3 868 246 128 0 0 chr17 37131907 37131946 -58140705 + (TCC)n Simple_repeat Simple_repeat 2 40 0 3 868 233 247 164 91 chr17 37131946 37132111 -58140540 + MTEa-int LTR MaLR 1111 1287 -83 3 868 259 211 18 0 chr17 37132115 37132172 -58140479 + B3A SINE B2 1 58 -140 3 868 362 280 20 20 chr17 37132180 37132282 -58140369 + MTEa-int LTR MaLR 1477 1578 -2 3 868 730 208 0 0 chr17 37132338 37132463 -58140188 - B3 SINE B2 -89 127 3 3 868 1083 293 71 40 chr17 37132465 37132817 -58139834 + MTEa LTR MaLR 5 367 -12 3 868 293 281 58 40 chr17 37132825 37133026 -58139625 + L1MC3 LINE L1 5489 5693 -486 3 868 625 226 97 14 chr17 37133072 37133323 -58139328 + L1MC3 LINE L1 7427 7817 -178 3 868 519 274 56 50 chr17 37133348 37133509 -58139142 - B3 SINE B2 -53 163 2 3 868 718 170 18 0 chr17 37133627 37133739 -58138912 - B3A SINE B2 -84 114 1 3 868 232 273 76 0 chr17 37133784 37133850 -58138801 + ID4_ SINE ID 1 71 -12 3 868 837 56 0 0 chr17 37134868 37134975 -58137676 - B1_Mus2 SINE Alu 0 147 41 3 868 265 267 66 41 chr17 37134911 37135032 -58137619 - RLTR25B LTR ERVK -519 509 386 3 868 238 247 235 47 chr17 37135426 37135511 -58137140 - PB1D7 SINE Alu -1 119 19 3 868 231 167 118 97 chr17 37135533 37135560 -58137091 + ID_B1 SINE B4 122 216 -8 3 868 438 50 0 91 chr17 37135560 37135626 -58137025 + B1_Mm SINE Alu 80 139 -8 3 868 311 269 26 0 chr17 37135795 37135873 -58136778 - ID4_ SINE ID 0 83 4 3 868 2245 128 9 20 chr17 37135995 37136345 -58136306 - MTC LTR MaLR -8 413 68 3 868 1197 66 36 6 chr17 37136381 37136548 -58136103 - B2_Mm2 SINE B2 -23 172 1 3 868 544 148 0 0 chr17 37136549 37136630 -58136021 - MTC LTR MaLR -340 81 1 3 868 623 204 0 0 chr17 37136671 37136779 -58135872 - RSINE1 SINE B4 -38 127 20 3 868 188 170 43 0 chr17 37136971 37137018 -58135633 + CT-rich Low_complexity Low_complexity 1 49 0 3 868 287 300 34 68 chr17 37137122 37137240 -58135411 - ORR1E LTR MaLR -167 192 79 3 868 315 0 0 0 chr17 37137334 37137369 -58135282 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 868 333 0 0 0 chr17 37137369 37137405 -58135246 + (GA)n Simple_repeat Simple_repeat 2 38 0 3 868 397 296 50 36 chr17 37137438 37137578 -58135073 - B1F1 SINE Alu -7 142 1 3 868 565 198 91 41 chr17 37137658 37137779 -58134872 - ID_B1 SINE B4 -10 214 88 3 868 257 247 133 11 chr17 37138172 37138262 -58134389 + MT2B2 LTR ERVL 155 255 -329 3 868 36 0 0 0 chr17 37138290 37138326 -58134325 + AT_rich Low_complexity Low_complexity 1 36 0 3 868 1218 61 0 0 chr17 37138515 37138662 -58133989 - B1_Mus1 SINE Alu 0 148 2 3 868 639 0 0 0 chr17 37139155 37139226 -58133425 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 868 227 118 0 0 chr17 37139227 37139261 -58133390 - B1F SINE Alu -23 126 93 3 868 223 140 0 57 chr17 37139300 37139353 -58133298 + C-rich Low_complexity Low_complexity 3 52 0 3 868 340 229 48 0 chr17 37140401 37140484 -58132167 - PB1D7 SINE Alu -27 93 7 3 868 226 319 33 0 chr17 37140403 37140494 -58132157 - ID_B1 SINE B4 -55 169 76 3 868 189 0 0 0 chr17 37140608 37140629 -58132022 + (T)n Simple_repeat Simple_repeat 1 21 0 3 868 385 356 60 77 chr17 37140928 37141162 -58131489 + Tigger5 DNA MER2_type 13 242 -2164 3 868 304 313 30 10 chr17 37141159 37141259 -58131392 + Tigger5 DNA MER2_type 2292 2393 -13 3 868 239 250 62 100 chr17 37141290 37141370 -58131281 + ID4 SINE ID 1 77 -6 3 868 547 311 84 18 chr17 37142179 37142405 -58130246 + B4A SINE B4 3 243 -49 3 868 305 100 20 0 chr17 37142622 37142672 -58129979 + (TCCCC)n Simple_repeat Simple_repeat 1 51 0 3 868 233 322 56 0 chr17 37142674 37142764 -58129887 + MamGypLTR1d LTR Gypsy 55 149 -664 3 868 217 351 78 0 chr17 37143299 37143376 -58129275 + B1F2 SINE Alu 37 119 -30 3 868 361 203 43 0 chr17 37143310 37143379 -58129272 + ID_B1 SINE B4 129 200 -24 3 868 714 302 35 30 chr17 37143382 37143583 -58129068 + B3 SINE B2 2 203 -13 3 868 251 125 42 0 chr17 37143583 37143631 -58129020 + (CATA)n Simple_repeat Simple_repeat 1 50 0 3 868 848 315 28 35 chr17 37143752 37144035 -58128616 - B4 SINE B4 -11 281 1 3 868 300 321 83 0 chr17 37144141 37144250 -58128401 + B1F SINE Alu 29 146 -3 3 868 822 260 5 19 chr17 37144370 37144582 -58128069 - B3 SINE B2 -6 210 2 3 868 256 214 0 0 chr17 37144912 37144954 -58127697 + PB1D7 SINE Alu 1 42 -78 3 868 515 296 57 44 chr17 37144995 37145154 -58127497 + RSINE1 SINE B4 3 163 -2 3 868 397 256 0 0 chr17 37145778 37145860 -58126791 - BC1_Mm scRNA scRNA -65 87 6 3 868 269 154 167 0 chr17 37145884 37145962 -58126689 - Tigger7 DNA MER2_type -138 2353 2263 3 868 312 91 0 0 chr17 37146166 37146210 -58126441 + (TAG)n Simple_repeat Simple_repeat 2 45 0 3 868 191 36 0 35 chr17 37147498 37147527 -58125124 + (CCCCCA)n Simple_repeat Simple_repeat 3 30 0 3 868 348 331 129 0 chr17 37148855 37148979 -58123672 + B1F2 SINE Alu 2 141 -8 3 868 304 226 34 143 chr17 37149441 37149560 -58123091 + Charlie4a DNA MER1_type 7 112 -396 3 868 338 264 90 9 chr17 37149655 37149766 -58122885 - PB1D7 SINE Alu 0 120 1 3 868 1223 54 0 0 chr17 37150009 37150157 -58122494 - B1_Mus1 SINE Alu 0 148 1 3 868 772 214 124 25 chr17 37150187 37150388 -58122263 + ID_B1 SINE B4 1 221 -3 3 868 663 247 45 0 chr17 37150395 37150549 -58122102 + RSINE1 SINE B4 2 162 -3 3 868 484 254 31 16 chr17 37150881 37151009 -58121642 + ID_B1 SINE B4 88 217 -7 3 868 707 232 7 0 chr17 37151136 37151274 -58121377 + B1_Mur1 SINE Alu 3 141 -8 3 868 282 274 11 16 chr17 37151293 37151379 -58121272 - B3A SINE B2 -87 108 20 3 868 237 196 0 0 chr17 37151447 37151498 -58121153 + (TA)n Simple_repeat Simple_repeat 1 51 0 3 868 641 300 93 24 chr17 37152255 37152460 -58120191 + 7SK RNA RNA 10 228 -103 3 868 1453 84 5 0 chr17 37152488 37152678 -58119973 + B2_Mm1t SINE B2 1 191 -2 3 868 638 269 46 12 chr17 37152774 37152947 -58119704 - B3A SINE B2 -16 182 4 3 868 326 14 13 78 chr17 37153308 37153385 -58119266 + (CAAAAA)n Simple_repeat Simple_repeat 2 73 0 3 868 544 268 59 43 chr17 37153733 37153920 -58118731 + B3A SINE B2 1 190 -8 3 868 207 0 0 0 chr17 37153922 37153945 -58118706 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 868 559 261 96 90 chr17 37153946 37154123 -58118528 - B3A SINE B2 -18 180 3 3 868 222 325 79 0 chr17 37154214 37154328 -58118323 + MIRb SINE MIR 71 193 -75 3 868 298 243 55 10 chr17 37154667 37154766 -58117885 + B1F SINE Alu 3 114 -6 3 868 191 61 30 0 chr17 37154834 37154867 -58117784 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 3 868 243 338 0 0 chr17 37154886 37154963 -58117688 - PB1D10 SINE Alu -36 81 5 3 868 307 298 0 23 chr17 37154895 37154981 -58117670 - ID_B1 SINE B4 -71 153 70 3 868 231 61 0 0 chr17 37155049 37155082 -58117569 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 3 868 596 198 204 0 chr17 37155776 37155938 -58116713 - B3A SINE B2 -3 195 1 4 868 479 304 22 0 chr17 37155997 37156135 -58116516 - ID_B1 SINE B4 -76 148 8 4 868 228 225 14 40 chr17 37156138 37156212 -58116439 + (CATA)n Simple_repeat Simple_repeat 1 72 0 4 868 441 90 0 0 chr17 37156218 37156285 -58116366 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 868 346 243 14 0 chr17 37156383 37156453 -58116198 + B1F SINE Alu 1 71 -78 4 868 1257 48 0 0 chr17 37156477 37156624 -58116027 + B1_Mus1 SINE Alu 2 148 0 4 868 197 33 0 32 chr17 37156627 37156658 -58115993 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 4 868 662 257 0 63 chr17 37156658 37156816 -58115835 + B1_Mur1 SINE Alu 1 148 -1 4 868 1262 34 0 0 chr17 37156839 37156985 -58115666 + B1_Mus2 SINE Alu 2 147 0 4 868 249 140 0 0 chr17 37156985 37157042 -58115609 + (A)n Simple_repeat Simple_repeat 1 57 0 4 868 1064 74 0 0 chr17 37157761 37157896 -58114755 + B1_Mus1 SINE Alu 2 136 -12 4 868 756 161 0 25 chr17 37157939 37158060 -58114591 - PB1D9 SINE Alu 0 120 3 4 868 324 0 0 0 chr17 37158079 37158115 -58114536 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 868 478 275 0 27 chr17 37158254 37158366 -58114285 - PB1D10 SINE Alu -8 109 1 4 868 665 291 4 41 chr17 37158377 37158596 -58114055 - B3A SINE B2 -9 207 1 4 868 562 254 42 28 chr17 37158614 37158756 -58113895 - ID_B1 SINE B4 0 224 81 4 868 1200 61 0 0 chr17 37158860 37159007 -58113644 + B1_Mm SINE Alu 1 147 0 4 868 435 263 10 39 chr17 37159182 37159285 -58113366 - B3A SINE B2 -98 100 1 4 868 180 0 0 0 chr17 37159535 37159555 -58113096 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 4 868 277 204 0 0 chr17 37159593 37159642 -58113009 - RSINE1 SINE B4 -114 51 3 4 868 199 344 88 24 chr17 37159644 37159769 -58112882 - MIR SINE MIR -6 256 124 4 868 298 301 0 0 chr17 37159782 37159855 -58112796 + ID4_ SINE ID 2 74 -9 4 868 186 133 0 0 chr17 37160077 37160107 -58112544 + (GGA)n Simple_repeat Simple_repeat 1 30 0 4 868 1189 62 0 7 chr17 37160545 37160692 -58111959 - B1_Mm SINE Alu -1 146 1 4 868 277 321 38 0 chr17 37160778 37160884 -58111767 - ID_B1 SINE B4 -4 220 111 4 868 665 192 69 0 chr17 37160949 37161079 -58111572 - B1_Mur2 SINE Alu -9 140 2 4 868 621 199 76 0 chr17 37161161 37161292 -58111359 - B1F1 SINE Alu -8 141 1 4 868 306 290 130 0 chr17 37161498 37161598 -58111053 - PB1D10 SINE Alu -2 115 3 4 868 393 264 36 0 chr17 37161670 37161780 -58110871 - L1_Mm LINE L1 -383 5500 5387 4 868 604 278 0 0 chr17 37162580 37162706 -58109945 - ID_B1 SINE B4 -15 209 84 4 868 1204 75 0 0 chr17 37162792 37162939 -58109712 + B1_Mm SINE Alu 1 147 0 4 868 1201 68 0 0 chr17 37163045 37163192 -58109459 + B1_Mm SINE Alu 1 147 0 4 868 243 0 0 0 chr17 37163192 37163219 -58109432 + (A)n Simple_repeat Simple_repeat 1 27 0 4 868 2293 107 41 114 chr17 37163405 37163869 -58108782 + RLTR23 LTR ERV1 1 430 0 4 868 577 196 36 119 chr17 37164094 37164262 -58108389 + B4 SINE B4 70 223 -69 4 868 1075 64 7 0 chr17 37164122 37164263 -58108388 + B1_Mus2 SINE Alu 5 146 -1 4 868 324 125 0 0 chr17 37164263 37164327 -58108324 + (CAAA)n Simple_repeat Simple_repeat 1 64 0 4 868 1779 185 62 0 chr17 37164356 37164712 -58107939 - ORR1C1 LTR MaLR 0 378 1 4 868 1412 75 5 11 chr17 37164732 37164920 -58107731 + B2_Mm2 SINE B2 1 187 -8 4 868 230 224 63 87 chr17 37164954 37165081 -58107570 + PB1 SINE Alu 4 127 0 4 868 183 172 0 0 chr17 37165340 37165369 -58107282 - L3b LINE CR1 -83 399 371 4 868 229 91 0 0 chr17 37165439 37165472 -58107179 + B1_Mus2 SINE Alu 106 138 -9 4 868 709 38 377 0 chr17 37166345 37166451 -58106200 + B1_Mm SINE Alu 2 147 0 4 868 663 53 282 26 chr17 37166482 37166599 -58106052 + B1_Mm SINE Alu 1 147 0 4 868 1119 162 10 5 chr17 37166626 37166818 -58105833 + RLTR24 LTR ERV1 28 220 -309 4 868 502 236 52 73 chr17 37167068 37167260 -58105391 + RLTR23 LTR ERV1 243 430 0 4 868 709 223 175 5 chr17 37167260 37167453 -58105198 + RLTR24 LTR ERV1 194 419 -110 4 868 22 0 0 0 chr17 37167676 37167698 -58104953 + AT_rich Low_complexity Low_complexity 1 22 0 4 868 415 125 0 45 chr17 37167776 37167843 -58104808 - B1_Mur2 SINE Alu -9 140 77 4 868 1169 62 7 0 chr17 37167897 37168043 -58104608 + B1_Mus1 SINE Alu 2 148 0 4 868 1053 187 22 6 chr17 37168229 37168412 -58104239 - RMER20A LTR ERVK 0 516 331 4 868 1140 69 14 0 chr17 37168412 37168556 -58104095 + B1_Mm SINE Alu 2 147 0 4 868 207 88 0 0 chr17 37168556 37168590 -58104061 + (A)n Simple_repeat Simple_repeat 1 34 0 4 868 1307 151 0 24 chr17 37168590 37168800 -58103851 - RMER20A LTR ERVK -311 205 1 4 868 3068 138 121 32 chr17 37169034 37169587 -58103064 + RMER19C LTR ERVK 1 602 -9 4 868 1002 110 7 20 chr17 37169953 37170101 -58102550 - B1_Mus2 SINE Alu -1 146 1 4 868 22 0 0 0 chr17 37170101 37170123 -58102528 + AT_rich Low_complexity Low_complexity 1 22 0 4 868 262 281 98 33 chr17 37170386 37170478 -58102173 - ID_B1 SINE B4 -15 209 112 4 868 1627 199 65 62 chr17 37170478 37170725 -58101926 - RLTR41 LTR ERV1 0 446 196 4 868 1188 82 0 0 chr17 37170725 37170872 -58101779 - B1_Mus1 SINE Alu -1 147 1 4 868 1627 199 65 62 chr17 37170872 37171042 -58101609 - RLTR41 LTR ERV1 -251 195 28 4 868 1002 192 0 0 chr17 37171042 37171330 -58101321 + CT-rich Low_complexity Low_complexity 1 288 0 4 868 1353 68 17 0 chr17 37171332 37171508 -58101143 - B2_Mm1t SINE B2 -14 179 1 4 868 27 0 0 0 chr17 37171704 37171731 -58100920 + AT_rich Low_complexity Low_complexity 1 27 0 4 868 1255 99 6 6 chr17 37171943 37171965 -58100686 - B2_Mm1a SINE B2 -11 182 161 4 868 315 0 0 0 chr17 37171965 37172000 -58100651 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 4 868 1255 99 6 6 chr17 37172000 37172159 -58100492 - B2_Mm1a SINE B2 -33 160 1 4 868 299 316 0 37 chr17 37172160 37172242 -58100409 + PB1D10 SINE Alu 26 104 -13 4 868 216 0 0 0 chr17 37172243 37172267 -58100384 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 868 1149 82 0 0 chr17 37172771 37172917 -58099734 + B1_Mus1 SINE Alu 3 148 0 4 868 1474 263 19 19 chr17 37173073 37173445 -58099206 + Lx7 LINE L1 6250 6621 -1075 4 868 1051 228 37 8 chr17 37173445 37173688 -58098963 + ORR1D1 LTR MaLR 1 250 -124 4 868 381 162 0 0 chr17 37173848 37173916 -58098735 + T-rich Low_complexity Low_complexity 1 68 0 4 868 1254 48 0 0 chr17 37173916 37174063 -58098588 - B1_Mm SINE Alu 0 147 1 4 868 222 37 0 0 chr17 37174101 37174128 -58098523 + (GA)n Simple_repeat Simple_repeat 1 27 0 4 868 493 158 188 0 chr17 37174211 37174312 -58098339 + PB1D9 SINE Alu 1 120 0 4 868 216 0 0 0 chr17 37174312 37174336 -58098315 + (CAAAAA)n Simple_repeat Simple_repeat 6 29 0 4 868 1469 68 5 10 chr17 37174350 37174544 -58098107 + B2_Mm1a SINE B2 1 193 0 4 868 416 253 33 64 chr17 37174573 37174716 -58097935 - B3A SINE B2 -30 165 33 4 868 439 218 62 26 chr17 37175087 37175200 -58097451 + PB1D10 SINE Alu 1 117 0 4 868 22 0 0 0 chr17 37175937 37175959 -58096692 + AT_rich Low_complexity Low_complexity 1 22 0 4 868 306 0 0 0 chr17 37175971 37176005 -58096646 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 868 549 270 8 0 chr17 37176010 37176136 -58096515 - RSINE1 SINE B4 -36 129 3 4 868 230 303 13 13 chr17 37176215 37176292 -58096359 + ID4_ SINE ID 1 77 -6 4 868 295 249 119 119 chr17 37176769 37176970 -58095681 + MER46C DNA MER2_type 2 202 -136 4 868 710 206 56 14 chr17 37177001 37177144 -58095507 - B1_Mur1 SINE Alu 0 149 1 4 868 696 191 105 58 chr17 37177202 37177374 -58095277 - B3A SINE B2 -16 182 3 4 868 1463 64 32 0 chr17 37177997 37178184 -58094467 + B2_Mm2 SINE B2 1 193 -2 4 868 639 221 20 79 chr17 37178308 37178460 -58094191 - RSINE1 SINE B4 0 165 23 4 868 417 86 0 0 chr17 37178499 37178557 -58094094 + (TA)n Simple_repeat Simple_repeat 1 58 0 4 868 317 176 89 56 chr17 37179010 37179093 -58093558 + MLT1A0 LTR MaLR 1 86 -279 4 868 617 93 12 0 chr17 37179093 37179179 -58093472 + RMER2 LTR ERV1 1 87 -480 4 868 415 310 26 0 chr17 37179268 37179384 -58093267 - B1F SINE Alu -29 120 2 4 868 480 336 38 0 chr17 37179427 37179558 -58093093 + B1F2 SINE Alu 3 138 -11 4 868 2247 110 3 16 chr17 37179555 37179878 -58092773 - ORR1A2 LTR MaLR -8 319 1 4 868 291 47 423 19 chr17 37180087 37180193 -58092458 - B2_Mm2 SINE B2 0 195 47 4 868 931 69 208 0 chr17 37180231 37180375 -58092276 - B2_Mm1t SINE B2 -19 174 1 4 868 195 42 0 0 chr17 37180588 37180612 -58092039 + (CAGAA)n Simple_repeat Simple_repeat 4 27 0 4 868 225 260 93 65 chr17 37180895 37181002 -58091649 - LTR64 LTR ERV1 -122 406 297 4 868 1171 62 7 0 chr17 37181122 37181267 -58091384 - B1_Mus2 SINE Alu 0 147 2 4 868 1098 228 123 22 chr17 37181579 37181897 -58090754 + MER20B DNA MER1_type 189 538 -245 4 868 317 262 163 0 chr17 37181917 37182089 -58090562 + MER20B DNA MER1_type 580 779 -4 4 868 222 315 15 31 chr17 37182895 37183035 -58089616 + C-rich Low_complexity Low_complexity 1 137 0 4 868 289 352 79 7 chr17 37186280 37186420 -58086231 + Arthur1B DNA Tip100 25 174 -1051 4 868 204 275 14 84 chr17 37187349 37187492 -58085159 + CT-rich Low_complexity Low_complexity 1 133 0 4 868 195 42 0 0 chr17 37191004 37191028 -58081623 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 868 1246 48 0 0 chr17 37191344 37191491 -58081160 - B1_Mus1 SINE Alu 0 148 2 5 868 189 0 0 0 chr17 37191532 37191553 -58081098 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 868 200 200 0 24 chr17 37194235 37194276 -58078375 + (TTG)n Simple_repeat Simple_repeat 3 42 0 5 868 194 83 0 53 chr17 37194320 37194358 -58078293 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 5 868 689 196 42 0 chr17 37194360 37194503 -58078148 - B1_Mur2 SINE Alu 0 149 1 5 868 851 0 10 0 chr17 37194544 37194643 -58078008 + (TTC)n Simple_repeat Simple_repeat 2 101 0 5 868 302 366 58 13 chr17 37194969 37195124 -58077527 - MIRb SINE MIR -64 204 43 5 868 362 265 180 22 chr17 37195926 37196065 -58076586 - MER5A DNA MER1_type -25 164 4 5 868 286 348 8 42 chr17 37196097 37196217 -58076434 + MER20 DNA MER1_type 104 219 0 5 868 381 131 0 0 chr17 37196296 37196357 -58076294 + (GAAA)n Simple_repeat Simple_repeat 4 64 0 5 868 367 251 206 29 chr17 37196618 37196843 -58075808 + MIR SINE MIR 4 260 -8 5 868 413 110 14 0 chr17 37196845 37196918 -58075733 + (CCA)n Simple_repeat Simple_repeat 1 74 0 5 868 278 249 77 60 chr17 37197081 37197199 -58075452 - B3A SINE B2 -1 215 98 5 868 204 40 0 0 chr17 37197258 37197283 -58075368 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 5 868 406 298 31 69 chr17 37197288 37197418 -58075233 - B1_Mur1 SINE Alu -17 132 8 5 868 221 338 0 81 chr17 37197452 37197539 -58075112 - PB1 SINE Alu -18 109 30 5 868 318 354 78 12 chr17 37197726 37197892 -58074759 - MIRb SINE MIR -53 215 39 5 868 534 279 105 39 chr17 37197894 37198151 -58074500 - L1MC1 LINE L1 -9 6324 6051 5 868 549 267 80 27 chr17 37198388 37198538 -58074113 - RSINE1 SINE B4 -4 161 4 5 868 644 234 31 0 chr17 37202086 37202214 -58070437 - RSINE1 SINE B4 -29 136 5 5 868 566 306 0 0 chr17 37202255 37202399 -58070252 - B1F SINE Alu -5 144 1 5 868 779 215 6 28 chr17 37202411 37202430 -58070221 - B2_Mm2 SINE B2 -4 191 173 5 868 550 252 63 28 chr17 37202430 37202573 -58070078 - B1_Mur1 SINE Alu 0 149 2 5 868 779 215 6 28 chr17 37202573 37202593 -58070058 - B2_Mm2 SINE B2 -23 172 155 5 868 270 0 0 0 chr17 37202593 37202623 -58070028 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 5 868 779 215 6 28 chr17 37202623 37202764 -58069887 - B2_Mm2 SINE B2 -41 154 15 5 868 650 190 0 154 chr17 37202760 37202865 -58069786 - B3 SINE B2 -79 137 38 5 868 1131 95 0 0 chr17 37202865 37203013 -58069638 + B1_Mus1 SINE Alu 1 148 0 5 868 650 190 0 154 chr17 37203013 37203069 -58069582 - B3 SINE B2 -179 37 1 5 868 293 293 67 0 chr17 37203071 37203146 -58069505 - PB1D7 SINE Alu -8 112 33 5 868 27 29 0 0 chr17 37203191 37203225 -58069426 + AT_rich Low_complexity Low_complexity 1 34 0 5 868 22 0 0 0 chr17 37203285 37203307 -58069344 + AT_rich Low_complexity Low_complexity 1 22 0 5 868 618 194 34 14 chr17 37203616 37203762 -58068889 + B1_Mur3 SINE Alu 1 149 0 5 868 260 96 30 69 chr17 37203792 37203893 -58068758 + A-rich Low_complexity Low_complexity 3 99 0 5 868 368 111 16 0 chr17 37205870 37205933 -58066718 + (TCCCC)n Simple_repeat Simple_repeat 3 66 0 5 868 759 165 39 0 chr17 37206489 37206616 -58066035 + B1_Mur1 SINE Alu 17 148 -1 5 868 1251 103 21 11 chr17 37207874 37208060 -58064591 - B2_Mm2 SINE B2 -7 188 1 5 868 21 36 0 0 chr17 37208068 37208096 -58064555 + AT_rich Low_complexity Low_complexity 1 28 0 5 868 616 298 129 10 chr17 37208258 37208451 -58064200 + B4 SINE B4 70 285 -7 5 868 300 53 0 0 chr17 37208630 37208668 -58063983 + (T)n Simple_repeat Simple_repeat 1 38 0 5 868 405 0 0 0 chr17 37210421 37210466 -58062185 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 868 283 236 0 0 chr17 37210763 37210818 -58061833 - B1F1 SINE Alu -81 68 14 5 868 212 318 59 76 chr17 37210773 37210892 -58061759 - ID_B1 SINE B4 -85 139 23 5 868 201 167 70 23 chr17 37211420 37211463 -58061188 + MIR SINE MIR 6 50 -212 5 868 206 118 0 0 chr17 37212077 37212111 -58060540 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 5 868 322 274 0 14 chr17 37212511 37212585 -58060066 - B1F SINE Alu -9 140 68 5 868 434 285 69 49 chr17 37212655 37212799 -58059852 - B1F1 SINE Alu 0 149 3 5 868 245 241 370 0 chr17 37212813 37212921 -58059730 - B1F SINE Alu -1 148 1 5 868 545 232 120 0 chr17 37213654 37213779 -58058872 - B1F2 SINE Alu -5 144 5 5 868 1182 22 0 0 chr17 37214147 37214281 -58058370 + B1_Mus1 SINE Alu 5 138 -10 5 868 1495 123 5 18 chr17 37214327 37214550 -58058101 + URR1A DNA MER1_type 7 226 0 5 868 572 281 28 81 chr17 37214550 37214579 -58058072 - CYRA11_Mm Unknown Y-chromosome -460 157 142 5 868 277 244 195 11 chr17 37214695 37214782 -58057869 - MER34A1 LTR ERV1 -32 555 453 5 868 1029 130 12 0 chr17 37214784 37214946 -58057705 + RMER4A LTR ERVK 1 164 -302 5 868 432 132 79 0 chr17 37214946 37215022 -58057629 + MurERV4-int LTR ERVK 3509 3590 -1670 5 868 734 175 86 91 chr17 37215087 37215115 -58057536 - RMER10A LTR ERVL -167 231 205 5 868 705 56 0 0 chr17 37215115 37215205 -58057446 + (GA)n Simple_repeat Simple_repeat 1 90 0 5 868 951 172 92 23 chr17 37215205 37215408 -58057243 - RMER10A LTR ERVL -232 210 1 5 868 628 161 21 156 chr17 37215408 37215600 -58057051 + MurERV4-int LTR ERVK 3616 3781 -1479 5 868 1290 214 26 15 chr17 37215601 37215867 -58056784 + RMER4A LTR ERVK 198 466 0 5 868 273 197 30 15 chr17 37216256 37216323 -58056328 + PB1D9 SINE Alu 33 100 -20 5 868 336 298 73 45 chr17 37216336 37216515 -58056136 - RLTR23 LTR ERV1 0 430 247 5 868 180 0 0 0 chr17 37216739 37216759 -58055892 + (T)n Simple_repeat Simple_repeat 1 20 0 5 868 2412 115 73 57 chr17 37217013 37217436 -58055215 - RLTR23 LTR ERV1 0 430 1 5 868 261 0 0 0 chr17 37217766 37217795 -58054856 + (A)n Simple_repeat Simple_repeat 1 29 0 5 868 253 212 136 0 chr17 37218345 37218411 -58054240 - MER58A DNA MER1_type -149 75 1 5 868 452 175 12 12 chr17 37218695 37218776 -58053875 + B3A SINE B2 4 84 -114 5 868 715 209 37 0 chr17 37218828 37218962 -58053689 + B1_Mur2 SINE Alu 7 145 -4 5 868 2064 114 11 35 chr17 37219284 37219672 -58052979 + RLTR10A LTR ERVK 1 359 0 5 868 288 253 10 81 chr17 37219839 37219938 -58052713 - PB1D7 SINE Alu 0 120 29 5 868 387 0 0 0 chr17 37220655 37220698 -58051953 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 868 5024 36 10 0 chr17 37220716 37221306 -58051345 - L1Md_A LINE L1 0 6582 5987 5 868 1215 42 0 0 chr17 37221313 37221456 -58051195 - B1_Mm SINE Alu -4 143 1 5 868 574 219 152 12 chr17 37221512 37221683 -58050968 + B3A SINE B2 4 198 0 5 868 1159 122 72 0 chr17 37221688 37221869 -58050782 + B2_Mm2 SINE B2 2 195 0 5 868 194 57 57 0 chr17 37223632 37223667 -58048984 + (TTTTC)n Simple_repeat Simple_repeat 4 40 0 5 868 864 164 27 0 chr17 37223698 37223844 -58048807 - B1_Mur4 SINE Alu 0 150 1 5 868 370 272 42 50 chr17 37224302 37224422 -58048229 + PB1D9 SINE Alu 2 120 0 5 108 515 276 21 112 chr17 37224418 37224636 -58048015 + B3A SINE B2 9 211 -5 5 869 268 284 146 11 chr17 37225057 37225146 -58047505 + MER63B DNA AcHobo 331 431 -5 5 869 283 227 15 0 chr17 37225909 37225975 -58046676 + HERV16-int LTR ERVL 2136 2202 -2794 5 869 737 109 79 0 chr17 37226257 37226422 -58046229 + CT-rich Low_complexity Low_complexity 2 179 0 5 869 324 70 0 0 chr17 37226421 37226464 -58046187 + (TCC)n Simple_repeat Simple_repeat 1 43 0 5 869 1328 86 5 21 chr17 37226464 37226655 -58045996 - B2_Mm1t SINE B2 -4 189 2 5 869 571 159 0 116 chr17 37227085 37227180 -58045471 + B1_Mur2 SINE Alu 43 125 -24 5 869 1221 54 0 0 chr17 37227180 37227327 -58045324 - B1_Mus1 SINE Alu 0 148 2 5 869 571 159 0 116 chr17 37227327 37227352 -58045299 + B1_Mur2 SINE Alu 126 149 0 5 869 264 122 0 0 chr17 37227365 37227406 -58045245 + (CCAA)n Simple_repeat Simple_repeat 2 42 0 5 869 389 296 62 19 chr17 37227414 37227624 -58045027 - MER63D DNA AcHobo -760 301 83 5 869 764 222 45 0 chr17 37227673 37227849 -58044802 - B3A SINE B2 -10 188 5 5 869 656 343 24 10 chr17 37228216 37228422 -58044229 + B3A SINE B2 2 210 -6 5 869 753 200 200 0 chr17 37231376 37231556 -58041095 + B3 SINE B2 1 216 0 5 869 591 282 63 23 chr17 37231731 37231905 -58040746 + B3A SINE B2 2 182 -16 5 869 21 57 0 0 chr17 37231916 37231951 -58040700 + AT_rich Low_complexity Low_complexity 1 35 0 5 869 314 229 43 0 chr17 37231994 37232064 -58040587 + PB1D7 SINE Alu 46 118 -2 5 869 21 0 0 0 chr17 37232115 37232136 -58040515 + AT_rich Low_complexity Low_complexity 1 21 0 5 869 240 263 18 58 chr17 37232209 37232321 -58040330 - PB1D10 SINE Alu -1 148 46 5 869 1574 206 134 12 chr17 37232739 37233082 -58039569 - MTD LTR MaLR -23 396 12 5 869 324 35 70 0 chr17 37233123 37233180 -58039471 + (TTTG)n Simple_repeat Simple_repeat 4 64 0 5 869 24 0 0 0 chr17 37233264 37233288 -58039363 + AT_rich Low_complexity Low_complexity 1 24 0 5 869 414 0 0 0 chr17 37234046 37234092 -58038559 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 869 863 193 0 0 chr17 37234236 37234381 -58038270 - B1_Mur4 SINE Alu -5 145 1 5 869 249 289 109 22 chr17 37234546 37234684 -58037967 - MIR SINE MIR -112 150 1 5 869 380 179 218 0 chr17 37235819 37235897 -58036754 - B1_Mus2 SINE Alu -52 95 1 5 869 224 229 0 20 chr17 37235859 37235908 -58036743 - B4A SINE B4 -169 123 76 5 869 32384 71 6 15 chr17 37236611 37241525 -58031126 - L1Md_F2 LINE L1 0 6582 1707 5 869 1094 75 7 0 chr17 37241525 37241672 -58030979 - B1_Mus1 SINE Alu 0 148 1 6 869 32384 78 21 6 chr17 37241672 37243027 -58029624 - L1Md_F2 LINE L1 -4177 1706 338 5 869 270 0 0 0 chr17 37243131 37243161 -58029490 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 6 869 216 0 0 0 chr17 37243476 37243500 -58029151 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6 869 335 188 101 30 chr17 37243608 37243707 -58028944 - Lx7 LINE L1 -426 7270 7165 6 869 729 0 0 0 chr17 37243936 37244017 -58028634 + (TCTCC)n Simple_repeat Simple_repeat 3 83 0 6 869 222 222 0 0 chr17 37244025 37244061 -58028590 + PB1D9 SINE Alu 1 36 -84 6 869 396 86 0 0 chr17 37244629 37244687 -58027964 + L1Md_F2 LINE L1 6513 6570 -12 6 869 1092 83 137 0 chr17 37244702 37244870 -58027781 + B2_Mm1a SINE B2 3 193 0 6 869 180 0 0 0 chr17 37245013 37245033 -58027618 + (TTA)n Simple_repeat Simple_repeat 1 20 0 6 869 311 339 150 29 chr17 37245371 37245544 -58027107 - B3A SINE B2 -1 197 4 6 869 322 316 25 0 chr17 37245551 37245630 -58027021 - ID4 SINE ID 0 83 3 6 869 511 256 30 23 chr17 37245685 37245770 -58026881 + B3A SINE B2 2 85 -113 6 869 3453 47 28 7 chr17 37245770 37246197 -58026454 - RLTR10C LTR ERVK 0 436 1 6 869 511 256 30 23 chr17 37246197 37246243 -58026408 + B3A SINE B2 86 133 -65 6 869 3069 153 21 8 chr17 37246263 37246778 -58025873 + RLTR17 LTR ERVK 139 660 -32 6 869 219 114 0 0 chr17 37246884 37246919 -58025732 + (TTG)n Simple_repeat Simple_repeat 2 36 0 6 869 649 202 69 8 chr17 37246999 37247129 -58025522 + B1_Mur4 SINE Alu 13 150 0 6 869 418 316 148 47 chr17 37247397 37247633 -58025018 - RMER15 LTR ERVL -46 529 270 6 869 1255 121 10 16 chr17 37249697 37249891 -58022760 + B2_Mm2 SINE B2 3 195 0 6 869 263 277 48 12 chr17 37249920 37250004 -58022647 + PB1D7 SINE Alu 27 113 -7 6 869 21 36 0 0 chr17 37250046 37250074 -58022577 + AT_rich Low_complexity Low_complexity 1 28 0 6 869 229 309 82 31 chr17 37250101 37250198 -58022453 - B1F1 SINE Alu -1 148 47 6 869 613 207 18 0 chr17 37250420 37250531 -58022120 - B1_Mus2 SINE Alu -22 125 13 6 869 995 150 4 0 chr17 37250538 37250792 -58021859 + CT-rich Low_complexity Low_complexity 1 254 0 6 869 384 274 167 39 chr17 37251688 37252017 -58020634 - L1M2 LINE L1 -2809 3334 3027 6 869 283 122 21 32 chr17 37252020 37252113 -58020538 + T-rich Low_complexity Low_complexity 3 94 0 6 869 248 312 26 8 chr17 37253424 37253522 -58019129 + B4A SINE B4 2 101 -191 6 869 287 331 22 11 chr17 37254168 37254351 -58018300 - MuRRS4-int LTR ERV1 -3711 1352 1168 6 869 180 111 0 0 chr17 37254379 37254406 -58018245 + (T)n Simple_repeat Simple_repeat 1 27 0 6 869 1100 95 0 26 chr17 37254406 37254558 -58018093 - B1_Mus1 SINE Alu 0 148 1 6 869 226 202 93 23 chr17 37254708 37254794 -58017857 - L1MC4 LINE L1 -288 7754 7663 6 869 417 191 26 167 chr17 37255501 37255728 -58016923 + RMER17C LTR ERVK 80 274 -136 6 869 216 97 0 0 chr17 37255729 37255760 -58016891 + (A)n Simple_repeat Simple_repeat 1 31 0 6 869 793 214 0 0 chr17 37256035 37256180 -58016471 - B1_Mur4 SINE Alu -5 145 1 6 869 247 284 117 18 chr17 37256339 37256450 -58016201 - MIR SINE MIR -106 156 35 6 869 22 0 0 0 chr17 37257579 37257601 -58015050 + AT_rich Low_complexity Low_complexity 1 22 0 6 869 357 167 207 49 chr17 37257617 37257699 -58014952 - B1_Mus2 SINE Alu -52 95 1 6 869 32 0 0 0 chr17 37258507 37258539 -58014112 + AT_rich Low_complexity Low_complexity 1 32 0 6 869 180 0 0 0 chr17 37258844 37258864 -58013787 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 6 869 343 188 101 30 chr17 37258973 37259072 -58013579 - Lx7 LINE L1 -426 7270 7165 6 869 311 107 36 0 chr17 37259299 37259355 -58013296 + (TTTCC)n Simple_repeat Simple_repeat 3 60 0 6 869 273 256 121 55 chr17 37259472 37259654 -58012997 + RMER17D2 LTR ERVK 379 572 -237 6 869 274 171 13 103 chr17 37260050 37260128 -58012523 - RLTR42-int LTR ERVK -3655 1867 1797 6 869 3160 60 2 2 chr17 37260148 37260548 -58012103 + MTB LTR MaLR 1 400 0 6 869 8176 25 0 3 chr17 37262138 37263070 -58009581 + RLTR13B3 LTR ERVK 1 929 0 6 869 515 195 137 8 chr17 37263340 37263457 -58009194 + MT2B2 LTR ERVL 318 450 -134 6 869 1380 267 55 22 chr17 37263457 37263821 -58008830 + RLTR21 LTR ERVK 1 376 -1196 6 869 316 136 0 0 chr17 37264040 37264084 -58008567 - HAL1-3A_ME LINE L1 -846 2012 1969 6 869 252 0 0 0 chr17 37264505 37264533 -58008118 + (A)n Simple_repeat Simple_repeat 1 28 0 6 869 1183 34 20 7 chr17 37264755 37264901 -58007750 + B1_Mus1 SINE Alu 1 148 0 6 869 243 0 0 0 chr17 37264914 37264941 -58007710 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 869 483 18 0 0 chr17 37265412 37265468 -58007183 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 869 351 0 0 0 chr17 37265468 37265506 -58007145 + (GA)n Simple_repeat Simple_repeat 1 39 0 6 869 1149 72 0 0 chr17 37265516 37265655 -58006996 - B1_Mus1 SINE Alu -8 140 2 6 869 2020 212 33 44 chr17 37266546 37267005 -58005646 - RMER6B LTR ERVK -5 456 3 6 869 2490 89 3 0 chr17 37267205 37267531 -58005120 + ORR1A2 LTR MaLR 1 327 0 6 869 264 374 0 0 chr17 37268346 37268477 -58004174 + GA-rich Low_complexity Low_complexity 2 132 0 6 869 1224 90 0 28 chr17 37269099 37269115 -58003536 - B2_Mm2 SINE B2 -18 177 162 6 869 513 0 0 0 chr17 37269115 37269172 -58003479 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 869 1224 90 0 28 chr17 37269172 37269337 -58003314 - B2_Mm2 SINE B2 -34 161 2 6 869 393 188 0 0 chr17 37269473 37269553 -58003098 + A-rich Low_complexity Low_complexity 3 82 0 6 869 222 62 0 0 chr17 37269708 37269740 -58002911 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 6 869 784 32 0 0 chr17 37269743 37269838 -58002813 - B1_Mm SINE Alu 0 147 53 6 869 533 331 0 0 chr17 37269951 37270081 -58002570 - RSINE1 SINE B4 -32 133 4 6 869 5539 117 66 7 chr17 37270217 37271121 -58001530 - RMER17B LTR ERVK 0 958 1 6 869 514 250 87 0 chr17 37271800 37271904 -58000747 - B1_Mur4 SINE Alu -34 116 4 6 869 1661 325 51 60 chr17 37272204 37272544 -58000107 - ORR1C1-int LTR MaLR -536 834 511 6 869 1552 37 0 5 chr17 37272544 37272732 -57999919 + B2_Mm2 SINE B2 1 187 -8 6 869 1962 238 25 17 chr17 37272732 37273232 -57999419 - ORR1C1-int LTR MaLR -860 510 1 6 869 939 232 190 40 chr17 37273234 37273561 -57999090 - ORR1C1 LTR MaLR -2 376 1 6 869 346 281 189 28 chr17 37274466 37274609 -57998042 - L1MC LINE L1 -2192 5690 5525 6 869 1926 152 22 3 chr17 37275998 37276315 -57996336 - ORR1A3 LTR MaLR -2 324 2 6 869 306 322 0 0 chr17 37276728 37276818 -57995833 + PB1D10 SINE Alu 21 110 -7 6 869 848 125 17 17 chr17 37276848 37277027 -57995624 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 6 869 802 281 10 20 chr17 37278432 37278632 -57994019 + B3 SINE B2 18 215 -1 6 869 1229 39 0 31 chr17 37279991 37280152 -57992499 - L1Md_F2 LINE L1 -9 6573 6418 6 869 22155 155 56 7 chr17 37280283 37282478 -57990173 + L1VL4 LINE L1 984 3269 -2617 6 869 1991 100 9 56 chr17 37282478 37282816 -57989835 + RLTRETN_Mm LTR ERVK 1 322 0 6 869 22155 161 47 8 chr17 37282816 37282996 -57989655 + L1VL4 LINE L1 3270 3487 -2399 6 869 468 0 0 0 chr17 37282996 37283048 -57989603 + (CAA)n Simple_repeat Simple_repeat 3 54 0 6 869 22155 161 47 8 chr17 37283048 37285367 -57987284 + L1VL4 LINE L1 3488 5859 -27 6 869 480 18 0 0 chr17 37285367 37285424 -57987227 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 869 6784 160 47 37 chr17 37285424 37286553 -57986098 + Lx2B LINE L1 5858 6996 -4 6 869 993 73 19 24 chr17 37287061 37287274 -57985377 + (TAGA)n Simple_repeat Simple_repeat 1 211 0 6 869 356 324 9 18 chr17 37287295 37287405 -57985246 - LTR75 LTR ERVL -413 149 41 6 869 810 0 0 0 chr17 37287794 37287884 -57984767 + (TTC)n Simple_repeat Simple_repeat 1 90 0 6 869 521 15 0 15 chr17 37289416 37289483 -57983168 + (TA)n Simple_repeat Simple_repeat 1 66 0 6 869 2645 136 46 46 chr17 37289717 37290219 -57982432 + L1VL1 LINE L1 210 711 -5711 6 869 24221 117 16 16 chr17 37290213 37293769 -57978882 + L1_Mus3 LINE L1 1838 5402 -481 6 869 2705 94 3 0 chr17 37293769 37294143 -57978508 + L1_Mus1 LINE L1 6188 6562 -5 6 869 24221 107 11 5 chr17 37294143 37295383 -57977268 + L1_Mus3 LINE L1 5403 6638 0 6 869 319 330 9 9 chr17 37295386 37295496 -57977155 - PB1D7 SINE Alu -10 110 1 6 869 915 9 0 0 chr17 37295519 37295628 -57977023 + B1_Mm SINE Alu 39 147 0 6 869 417 234 33 40 chr17 37295953 37296107 -57976544 + B3A SINE B2 1 216 0 6 869 396 0 0 0 chr17 37296137 37296181 -57976470 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 869 265 385 62 0 chr17 37296183 37296313 -57976338 - RSINE1 SINE B4 -26 139 2 6 869 445 274 25 41 chr17 37296314 37296436 -57976215 - ID_B1 SINE B4 -1 223 104 6 869 745 278 103 38 chr17 37296550 37296812 -57975839 - B4A SINE B4 -6 286 8 6 869 222 329 50 12 chr17 37297568 37297648 -57975003 + B1F SINE Alu 10 92 -57 6 869 474 18 0 0 chr17 37299230 37299285 -57973366 + (TTTA)n Simple_repeat Simple_repeat 3 57 0 6 869 1108 89 6 6 chr17 37299285 37299444 -57973207 - B2_Mm1t SINE B2 -33 160 2 6 869 6496 50 16 0 chr17 37299451 37300246 -57972405 - RLTR13C2 LTR ERVK 0 808 1 6 869 189 0 0 0 chr17 37300435 37300456 -57972195 + (GAAA)n Simple_repeat Simple_repeat 4 24 0 6 869 252 0 0 0 chr17 37300595 37300623 -57972028 + (A)n Simple_repeat Simple_repeat 1 28 0 6 869 278 242 32 0 chr17 37301105 37301167 -57971484 - ID2 SINE ID -19 64 1 6 869 666 89 0 26 chr17 37302063 37302178 -57970473 + (TTCTC)n Simple_repeat Simple_repeat 1 112 0 6 869 335 188 0 28 chr17 37302179 37302250 -57970401 + C-rich Low_complexity Low_complexity 1 69 0 6 869 587 14 0 14 chr17 37302250 37302323 -57970328 + (TTTC)n Simple_repeat Simple_repeat 2 73 0 7 869 7551 64 16 1 chr17 37302336 37303447 -57969204 - L1_Mus3 LINE L1 -8 6630 5505 7 869 21 36 0 0 chr17 37303748 37303776 -57968875 + AT_rich Low_complexity Low_complexity 1 28 0 7 869 319 282 28 0 chr17 37303944 37304015 -57968636 - ID4 SINE ID 0 83 11 7 869 548 232 81 7 chr17 37304077 37304236 -57968415 + B3A SINE B2 2 164 -52 7 869 2971 141 52 2 chr17 37304221 37304718 -57967933 + RLTR17 LTR ERVK 139 660 -32 7 869 185 83 0 27 chr17 37304827 37304864 -57967787 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 7 869 669 192 61 8 chr17 37304941 37305072 -57967579 + B1_Mur4 SINE Alu 13 150 0 7 869 189 0 0 0 chr17 37305614 37305635 -57967016 + (A)n Simple_repeat Simple_repeat 1 21 0 7 869 352 333 148 47 chr17 37306064 37306300 -57966351 - RMER15 LTR ERVL -46 529 270 7 869 201 125 0 0 chr17 37307888 37307920 -57964731 - L2c LINE L2 -1 3386 3355 7 869 1292 109 5 10 chr17 37308363 37308557 -57964094 + B2_Mm2 SINE B2 3 195 0 7 869 250 278 43 32 chr17 37308589 37308682 -57963969 + PB1D7 SINE Alu 27 120 0 7 869 21 36 0 0 chr17 37308716 37308744 -57963907 + AT_rich Low_complexity Low_complexity 1 28 0 7 869 243 298 82 31 chr17 37308771 37308868 -57963783 - B1F1 SINE Alu -1 148 47 7 869 612 205 18 0 chr17 37309090 37309202 -57963449 - B1_Mus2 SINE Alu -22 125 12 7 869 904 123 0 43 chr17 37309206 37309393 -57963258 + T-rich Low_complexity Low_complexity 2 180 0 7 869 1266 55 0 0 chr17 37309401 37309564 -57963087 + (TCTCC)n Simple_repeat Simple_repeat 5 167 0 7 869 761 58 0 10 chr17 37309565 37309669 -57962982 + (TTTC)n Simple_repeat Simple_repeat 2 104 0 7 869 219 83 0 0 chr17 37310508 37310515 -57962136 + (TG)n Simple_repeat Simple_repeat 2 8 0 7 869 389 20 20 0 chr17 37310515 37310565 -57962086 + (TGG)n Simple_repeat Simple_repeat 3 53 0 7 869 219 83 0 0 chr17 37310565 37310593 -57962058 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 869 2500 158 62 54 chr17 37310861 37311364 -57961287 + RMER15 LTR ERVL 12 518 -57 7 869 338 315 182 38 chr17 37314024 37314446 -57958205 - HAL1-2a_MD LINE L1 -1778 1246 764 7 869 264 291 30 12 chr17 37315762 37315860 -57956791 + B4A SINE B4 2 101 -191 7 869 510 149 0 0 chr17 37316220 37316307 -57956344 + (TTCC)n Simple_repeat Simple_repeat 2 88 0 7 869 1106 75 0 26 chr17 37316316 37316467 -57956184 - B1_Mus2 SINE Alu 0 147 1 7 869 351 333 11 11 chr17 37316752 37316937 -57955714 - MuRRS4-int LTR ERV1 -3711 1352 1168 7 869 1099 95 0 7 chr17 37316963 37317112 -57955539 - B1_Mus1 SINE Alu 0 148 1 7 869 263 236 37 89 chr17 37318039 37318279 -57954372 + RMER17C LTR ERVK 80 275 -135 7 869 312 91 0 0 chr17 37318279 37318323 -57954328 + (A)n Simple_repeat Simple_repeat 1 44 0 7 869 261 75 0 0 chr17 37318561 37318601 -57954050 + (TCTG)n Simple_repeat Simple_repeat 2 41 0 7 869 776 208 0 14 chr17 37318603 37318749 -57953902 - B1_Mur4 SINE Alu -6 144 1 7 869 226 312 104 21 chr17 37318908 37319052 -57953599 - MIR SINE MIR -106 156 1 7 869 198 304 71 0 chr17 37319071 37319127 -57953524 - MIR SINE MIR -123 139 80 7 869 231 333 106 27 chr17 37319440 37319577 -57953074 - MIR SINE MIR -116 152 4 7 869 436 299 26 0 chr17 37319920 37320037 -57952614 + B4 SINE B4 100 219 -73 7 869 328 303 0 18 chr17 37320150 37320261 -57952390 + (CATATA)n Simple_repeat Simple_repeat 6 114 0 7 869 22 0 0 0 chr17 37320337 37320359 -57952292 + AT_rich Low_complexity Low_complexity 1 22 0 7 869 234 342 14 0 chr17 37320359 37320432 -57952219 - B3A SINE B2 -4 194 121 7 869 323 247 13 0 chr17 37320466 37320543 -57952108 + RMER30 DNA MER1_type 111 188 -14 7 869 267 328 0 0 chr17 37320676 37320743 -57951908 + ID4 SINE ID 15 81 -2 7 869 456 321 14 28 chr17 37321055 37321199 -57951452 - B1F2 SINE Alu -1 148 7 7 869 1398 73 0 6 chr17 37321316 37321496 -57951155 + B2_Mm2 SINE B2 2 180 -15 7 869 239 234 100 46 chr17 37321705 37321835 -57950816 + MIR SINE MIR 29 165 -97 7 869 252 305 9 28 chr17 37321877 37321985 -57950666 + CT-rich Low_complexity Low_complexity 6 111 0 7 869 222 206 0 0 chr17 37322151 37322214 -57950437 + (CATA)n Simple_repeat Simple_repeat 2 64 0 7 869 474 65 0 0 chr17 37322969 37323031 -57949620 + (TA)n Simple_repeat Simple_repeat 1 62 0 7 869 528 155 8 23 chr17 37323188 37323320 -57949331 - Lx9 LINE L1 -2 7642 7513 7 869 672 48 0 0 chr17 37323322 37323406 -57949245 + (TA)n Simple_repeat Simple_repeat 2 85 0 7 869 3444 191 31 0 chr17 37323409 37324094 -57948557 - Lx9 LINE L1 -179 7465 6760 7 869 840 316 46 43 chr17 37324097 37324249 -57948402 - RLTR18B LTR ERVK 0 512 363 7 869 1336 87 16 0 chr17 37324249 37324433 -57948218 + B2_Mm2 SINE B2 1 187 -8 7 869 840 316 46 43 chr17 37324433 37324604 -57948047 - RLTR18B LTR ERVK -150 362 188 7 869 426 153 34 45 chr17 37324604 37324693 -57947958 - Lx9 LINE L1 -912 6732 6645 7 869 433 264 248 7 chr17 37324726 37324871 -57947780 - B3A SINE B2 -13 185 6 7 869 482 254 25 91 chr17 37324887 37325008 -57947643 - B1_Mur1 SINE Alu -7 113 1 7 869 315 257 35 87 chr17 37324905 37325020 -57947631 - MT2B LTR ERVL -342 259 151 7 869 636 14 0 0 chr17 37325195 37325268 -57947383 + (TC)n Simple_repeat Simple_repeat 2 74 0 7 869 252 284 45 0 chr17 37325273 37325340 -57947311 - ID4 SINE ID -3 80 11 7 869 192 257 107 67 chr17 37326377 37326452 -57946199 - MIRm SINE MIR -37 239 162 7 869 381 43 0 0 chr17 37327332 37327379 -57945272 + (TATG)n Simple_repeat Simple_repeat 4 50 0 7 869 903 76 52 37 chr17 37327379 37327515 -57945136 - B2_Mm2 SINE B2 -57 138 1 7 869 198 0 0 0 chr17 37328119 37328141 -57944510 + (T)n Simple_repeat Simple_repeat 1 22 0 7 869 3190 80 61 9 chr17 37328141 37328598 -57944053 - LTRIS2 LTR ERV1 -79 485 5 7 869 873 231 17 13 chr17 37328601 37328834 -57943817 - RLTR1B-int LTR ERV1 -42 5021 4788 7 869 1089 205 63 10 chr17 37328949 37329329 -57943322 - RLTR1B-int LTR ERV1 -486 2813 2669 7 869 591 230 98 23 chr17 37329463 37329677 -57942974 + Lx7 LINE L1 7138 7367 -329 7 869 323 273 6 80 chr17 37329663 37329732 -57942919 + Lx7 LINE L1 7513 7576 -120 7 869 207 0 0 0 chr17 37329732 37329755 -57942896 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 869 323 273 6 80 chr17 37329755 37329848 -57942803 + Lx7 LINE L1 7577 7663 -33 7 869 198 71 0 0 chr17 37330335 37330363 -57942288 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 869 22 35 0 0 chr17 37331109 37331138 -57941513 + AT_rich Low_complexity Low_complexity 1 29 0 7 869 477 314 48 0 chr17 37331138 37331262 -57941389 - RSINE1 SINE B4 -8 157 28 7 869 201 74 0 0 chr17 37331262 37331289 -57941362 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 7 869 245 207 52 0 chr17 37332865 37332923 -57939728 + B1_Mus1 SINE Alu 1 61 -87 7 869 473 178 50 0 chr17 37334732 37334828 -57937823 + PB1D9 SINE Alu 2 109 -11 7 869 267 187 205 8 chr17 37335262 37335360 -57937291 + MER57F LTR ERV1 131 274 -162 7 869 223 227 0 0 chr17 37335399 37335443 -57937208 + CT-rich Low_complexity Low_complexity 1 44 0 7 869 506 274 7 22 chr17 37335443 37335581 -57937070 - ID_B1 SINE B4 -5 219 84 7 869 613 199 95 7 chr17 37335584 37335731 -57936920 + MER57F LTR ERV1 260 419 -17 7 869 313 200 67 0 chr17 37335748 37335808 -57936843 - tRNA-Ala-GCY_ tRNA tRNA -10 65 2 7 869 725 217 56 7 chr17 37336259 37336403 -57936248 + RSINE1 SINE B4 4 154 -11 7 869 293 291 25 0 chr17 37336519 37336598 -57936053 + MIR SINE MIR 41 121 -141 7 869 264 234 125 0 chr17 37336631 37336695 -57935956 + MIR SINE MIR 190 261 -1 7 869 236 267 22 176 chr17 37336746 37336837 -57935814 - ID4_ SINE ID -4 79 3 7 869 366 231 0 99 chr17 37336844 37336945 -57935706 - PB1D10 SINE Alu -2 115 25 7 869 333 0 0 0 chr17 37336945 37336982 -57935669 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 869 198 333 121 11 chr17 37337077 37337168 -57935483 - MIRb SINE MIR -133 135 35 7 869 220 280 0 0 chr17 37338449 37338499 -57934152 - B1F1 SINE Alu -99 50 1 7 869 650 301 26 0 chr17 37338799 37338952 -57933699 + RSINE1 SINE B4 2 158 -7 7 869 6396 58 50 0 chr17 37339638 37340458 -57932193 + L1_Mus2 LINE L1 5706 6566 0 7 869 702 35 0 0 chr17 37341131 37341216 -57931435 + (GA)n Simple_repeat Simple_repeat 1 85 0 7 869 30 0 0 0 chr17 37341710 37341740 -57930911 + AT_rich Low_complexity Low_complexity 1 30 0 7 869 381 296 36 36 chr17 37341740 37341852 -57930799 - PB1D10 SINE Alu -5 112 1 7 869 4792 148 29 3 chr17 37341898 37342651 -57930000 - Lx4B LINE L1 0 7058 6286 7 869 1737 225 75 100 chr17 37342651 37343337 -57929314 - RMER19C LTR ERVK 0 737 18 7 869 518 207 0 8 chr17 37343360 37343462 -57929189 - Lx4B LINE L1 -678 6298 6203 7 869 696 291 13 0 chr17 37343543 37343701 -57928950 - RSINE1 SINE B4 0 165 6 7 869 682 295 88 46 chr17 37343750 37343973 -57928678 + L1ME1 LINE L1 5614 5858 -325 7 869 1299 132 11 0 chr17 37343973 37344162 -57928489 + B2_Mm1a SINE B2 2 192 -1 7 869 682 288 76 62 chr17 37344162 37344431 -57928220 + L1ME1 LINE L1 5841 6115 -64 7 869 690 75 0 0 chr17 37344476 37344569 -57928082 + (TTC)n Simple_repeat Simple_repeat 1 93 0 7 869 501 14 0 52 chr17 37344569 37344646 -57928005 + (CCCCCT)n Simple_repeat Simple_repeat 5 77 0 7 869 1430 63 17 22 chr17 37344648 37344827 -57927824 - B2_Mm2 SINE B2 -16 179 2 7 869 26 30 0 0 chr17 37344827 37344860 -57927791 + AT_rich Low_complexity Low_complexity 1 33 0 7 869 365 176 9 0 chr17 37344873 37344937 -57927714 - B2_Mm2 SINE B2 -102 114 47 7 869 1387 85 11 0 chr17 37344988 37345164 -57927487 - B2_Mm1t SINE B2 -14 179 2 7 869 411 220 176 0 chr17 37345241 37345332 -57927319 + PB1D10 SINE Alu 5 111 -6 7 869 345 272 0 12 chr17 37345753 37345835 -57926816 - ID4_ SINE ID -1 82 2 8 869 504 241 28 0 chr17 37346182 37346290 -57926361 - PB1D7 SINE Alu 0 120 10 8 869 23 0 0 0 chr17 37346391 37346414 -57926237 + GC_rich Low_complexity Low_complexity 1 23 0 8 869 600 223 63 28 chr17 37346738 37346869 -57925782 + B1F2 SINE Alu 1 140 -9 8 869 569 14 14 0 chr17 37346869 37346939 -57925712 + (CCAA)n Simple_repeat Simple_repeat 2 72 0 8 869 600 223 63 28 chr17 37346939 37346950 -57925701 + B1F2 SINE Alu 141 148 -1 8 869 306 0 0 0 chr17 37346955 37346995 -57925656 + L1Md_T LINE L1 6541 6580 -2 8 869 243 183 46 66 chr17 37347008 37347160 -57925491 + A-rich Low_complexity Low_complexity 4 152 0 8 869 1035 78 0 0 chr17 37347294 37347436 -57925215 + (TCC)n Simple_repeat Simple_repeat 2 143 0 8 869 315 0 0 0 chr17 37347586 37347621 -57925030 + (TG)n Simple_repeat Simple_repeat 1 35 0 8 869 230 255 0 18 chr17 37347624 37347680 -57924971 - B1_Mur4 SINE Alu -90 60 6 8 869 528 16 0 0 chr17 37349030 37349091 -57923560 + (TC)n Simple_repeat Simple_repeat 2 62 0 8 869 459 266 47 24 chr17 37349093 37349220 -57923431 - B1F SINE Alu -19 130 1 8 869 384 216 40 0 chr17 37350571 37350645 -57922006 - B1_Mur1 SINE Alu -6 143 67 8 869 436 248 39 62 chr17 37350850 37350979 -57921672 - ID_B1 SINE B4 -20 204 79 8 869 287 253 41 21 chr17 37350980 37351077 -57921574 + Charlie1a DNA MER1_type 1330 1428 -27 8 869 942 257 81 20 chr17 37351266 37351611 -57921040 - Ricksha_c DNA MuDR -49 1999 1634 8 869 888 126 7 7 chr17 37352443 37352579 -57920072 - B1_Mur4 SINE Alu -3 147 12 8 869 401 236 42 112 chr17 37352487 37352630 -57920021 - MT2B LTR ERVL -346 255 123 8 869 589 170 0 10 chr17 37352633 37352734 -57919917 - Lx5 LINE L1 -1096 5954 5855 8 869 2497 123 18 3 chr17 37352745 37353128 -57919523 - Lx5 LINE L1 -432 5445 5057 8 869 746 177 0 8 chr17 37353135 37353260 -57919391 - ORR1D1 LTR MaLR -218 156 33 8 869 739 227 8 0 chr17 37353718 37353850 -57918801 + B3 SINE B2 1 133 -83 8 869 4925 111 60 36 chr17 37353842 37354885 -57917766 + RLTR13D3 LTR ERVK 8 1114 0 8 869 242 333 44 33 chr17 37354892 37354982 -57917669 + B3 SINE B2 126 216 0 8 108 2441 227 38 78 chr17 37355406 37356043 -57916608 - RMER19C LTR ERVK 0 611 1 8 870 200 191 71 0 chr17 37358176 37358218 -57914433 + polypyrimidine Low_complexity Low_complexity 2 46 0 8 870 378 181 280 14 chr17 37358496 37358614 -57914037 + B1_Mur2 SINE Alu 5 142 -5 8 870 544 161 0 53 chr17 37358675 37358865 -57913786 + (TCTG)n Simple_repeat Simple_repeat 1 180 0 8 870 909 144 197 26 chr17 37359048 37359241 -57913410 - URR1A DNA MER1_type 0 226 1 8 870 641 177 137 24 chr17 37359510 37359678 -57912973 - B2_Mm2 SINE B2 -8 187 1 8 870 198 0 0 0 chr17 37359807 37359829 -57912822 + (CAT)n Simple_repeat Simple_repeat 2 23 0 8 870 254 381 9 26 chr17 37360277 37360393 -57912258 + L2c LINE L2 3086 3199 -188 8 870 303 93 0 0 chr17 37360461 37360504 -57912147 + (T)n Simple_repeat Simple_repeat 1 43 0 8 870 4186 155 138 76 chr17 37360618 37361657 -57910994 - RLTR25A LTR ERVK 0 1103 1 8 870 180 0 0 0 chr17 37363534 37363554 -57909097 + (CAA)n Simple_repeat Simple_repeat 2 21 0 8 870 182 238 62 31 chr17 37363866 37363931 -57908720 + L3b LINE CR1 162 228 -254 8 870 11731 242 50 31 chr17 37363964 37367090 -57905561 + MYSERV6-int LTR ERVK 753 3939 -5020 8 870 1295 154 4 49 chr17 37367115 37367360 -57905291 + BGLII_B LTR ERVK 1 234 -207 8 870 1267 48 7 0 chr17 37367360 37367506 -57905145 + B1_Mus2 SINE Alu 1 147 0 8 870 264 227 66 25 chr17 37367506 37367518 -57905133 + RLTR31_Mur LTR ERVK 153 164 -389 8 870 448 36 0 0 chr17 37367542 37367597 -57905054 + ORR1B1 LTR MaLR 340 394 0 8 870 1074 153 63 0 chr17 37367638 37367827 -57904824 + BGLII_B LTR ERVK 241 441 0 8 870 1407 273 27 27 chr17 37367923 37368296 -57904355 - MTEb LTR MaLR -2 377 5 8 870 209 342 98 24 chr17 37369737 37369860 -57902791 + L2 LINE L2 2713 2844 -575 8 870 339 65 0 0 chr17 37370427 37370473 -57902178 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 870 1501 124 43 16 chr17 37371132 37371385 -57901266 - MT2C_Mm LTR ERVL 0 475 216 8 870 441 54 0 0 chr17 37372406 37372462 -57900189 + (CA)n Simple_repeat Simple_repeat 2 57 0 8 870 225 83 0 0 chr17 37373390 37373426 -57899225 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 870 1334 188 162 4 chr17 37373765 37374043 -57898608 + Lx5 LINE L1 6729 7050 0 8 870 801 149 40 72 chr17 37374672 37374824 -57897827 + B1_Mur3 SINE Alu 1 147 -2 8 870 1827 141 12 126 chr17 37375321 37375598 -57897053 + RLTR9A LTR ERVK 3 245 -123 8 870 3756 166 79 61 chr17 37375598 37376484 -57896167 - RMER17A2 LTR ERVK 0 906 5 8 870 3561 97 111 17 chr17 37376484 37377000 -57895651 + LTRIS2 LTR ERV1 1 564 0 8 870 1827 141 12 126 chr17 37377000 37377134 -57895517 + RLTR9A LTR ERVK 246 367 -1 8 870 227 109 65 0 chr17 37377440 37377486 -57895165 + A-rich Low_complexity Low_complexity 1 49 0 8 870 5323 136 94 71 chr17 37377506 37378622 -57894029 + RLTR45-int LTR ERVK 2073 3214 -4030 8 870 696 55 27 9 chr17 37378716 37378826 -57893825 + (GAGAA)n Simple_repeat Simple_repeat 3 114 0 8 870 5327 156 26 79 chr17 37378997 37380096 -57892555 + ETnERV2-int LTR ERVK 2200 3240 -4166 8 870 878 107 0 0 chr17 37380112 37380233 -57892418 - B1_Mus1 SINE Alu 0 148 28 8 870 10492 155 41 47 chr17 37380234 37382367 -57890284 + RMER16-int LTR ERVK 2179 6212 -1194 8 870 261 165 173 25 chr17 37382807 37382888 -57889763 + MMETn-int LTR ERVK 4750 4842 -2 8 870 2156 126 32 43 chr17 37382890 37383262 -57889389 + RLTR9A LTR ERVK 1 368 0 8 870 230 296 80 53 chr17 37383276 37383351 -57889300 - ID_B1 SINE B4 -57 167 91 8 870 654 264 25 13 chr17 37383431 37383588 -57889063 + B3 SINE B2 54 212 -4 8 870 379 198 16 16 chr17 37384269 37384392 -57888259 + (TATG)n Simple_repeat Simple_repeat 4 126 0 8 870 276 292 41 43 chr17 37384422 37384548 -57888103 - B1F2 SINE Alu -22 127 3 8 870 287 258 46 15 chr17 37384596 37384726 -57887925 - Ricksha_0 DNA MuDR -57 1676 1543 8 870 877 104 56 0 chr17 37385070 37385195 -57887456 - B1_Mus1 SINE Alu 0 148 17 8 870 481 212 97 90 chr17 37385083 37385228 -57887423 - MT2B LTR ERVL -318 283 138 8 870 586 289 73 75 chr17 37385622 37385786 -57886865 + B3 SINE B2 28 189 -27 8 870 212 231 62 0 chr17 37385788 37385853 -57886798 + GA-rich Low_complexity Low_complexity 4 72 0 8 870 1255 131 11 0 chr17 37386003 37386179 -57886472 + B2_Mm1t SINE B2 2 179 -14 8 870 295 127 325 27 chr17 37386202 37386316 -57886335 + B2_Mm2 SINE B2 47 194 -1 8 870 1980 220 31 20 chr17 37386644 37387172 -57885479 + RMER4B LTR ERVK 17 585 0 8 870 11446 239 52 38 chr17 37388701 37392184 -57880467 + MYSERV6-int LTR ERVK 686 4220 -4739 8 870 6199 128 20 15 chr17 37392184 37393220 -57879431 + Lx LINE L1 5614 6654 0 8 870 4698 211 104 115 chr17 37393295 37395257 -57877394 + MYSERV16_I-int LTR ERVK 30 1637 -689 8 870 3919 60 6 36 chr17 37395257 37395972 -57876679 - L1Md_F2 LINE L1 0 6582 6047 8 870 4698 196 112 131 chr17 37395972 37396334 -57876317 + MYSERV16_I-int LTR ERVK 1638 1943 -383 8 870 1161 68 0 0 chr17 37396334 37396481 -57876170 - B1_Mm SINE Alu 0 147 1 8 870 4698 196 112 131 chr17 37396481 37396856 -57875795 + MYSERV16_I-int LTR ERVK 1944 2326 0 8 870 829 122 0 0 chr17 37396856 37396979 -57875672 + BGLII_B LTR ERVK 1 123 -318 8 870 9510 12 1 1 chr17 37396984 37398815 -57873836 - L1Md_A LINE L1 0 6582 4751 8 870 1732 146 52 0 chr17 37398815 37399124 -57873527 + BGLII_B LTR ERVK 117 441 0 8 870 1312 294 24 24 chr17 37399220 37399593 -57873058 - MTEb LTR MaLR -2 377 5 8 870 203 377 77 6 chr17 37400986 37401154 -57871497 + L2 LINE L2 2665 2844 -575 8 870 414 0 0 0 chr17 37401747 37401793 -57870858 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 870 264 30 0 0 chr17 37402695 37402728 -57869923 + (TG)n Simple_repeat Simple_repeat 2 34 0 8 870 229 358 79 21 chr17 37402777 37402917 -57869734 - MER34 LTR ERV1 -15 527 380 8 870 191 345 141 0 chr17 37403258 37403400 -57869251 + L2 LINE L2 2836 2997 -422 8 870 402 21 0 0 chr17 37403510 37403557 -57869094 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 870 549 105 0 0 chr17 37404107 37404183 -57868468 - U4 snRNA snRNA -69 76 1 8 870 378 0 0 0 chr17 37404588 37404630 -57868021 + (TC)n Simple_repeat Simple_repeat 1 42 0 8 870 216 0 0 0 chr17 37404630 37404653 -57867998 + (CA)n Simple_repeat Simple_repeat 1 24 0 8 870 1449 207 65 3 chr17 37404988 37405294 -57867357 + Lx5 LINE L1 6722 7046 -4 8 870 21 0 0 0 chr17 37405299 37405320 -57867331 + AT_rich Low_complexity Low_complexity 1 21 0 8 870 671 179 49 28 chr17 37405974 37406118 -57866533 + B1_Mur3 SINE Alu 1 147 -2 8 870 228 256 134 49 chr17 37406620 37406702 -57865949 - ID_B1 SINE B4 -45 179 91 8 870 673 258 19 13 chr17 37406752 37406909 -57865742 + B3 SINE B2 54 211 -5 8 870 2188 165 64 3 chr17 37408639 37409028 -57863623 - MTC LTR MaLR -8 413 1 8 870 234 150 0 0 chr17 37409890 37409930 -57862721 + (TATG)n Simple_repeat Simple_repeat 4 43 0 8 870 702 307 111 6 chr17 37409939 37410119 -57862532 - B4A SINE B4 0 292 94 8 870 25 0 0 0 chr17 37411324 37411349 -57861302 + AT_rich Low_complexity Low_complexity 1 25 0 8 870 295 278 78 0 chr17 37411597 37411687 -57860964 - L2 LINE L2 -1091 2328 2232 8 870 928 174 20 40 chr17 37411783 37412005 -57860646 + ORR1D1-int LTR MaLR 1178 1370 0 8 870 353 204 27 2 chr17 37411987 37412075 -57860576 + ORR1D1 LTR MaLR 1 89 -305 8 870 280 316 88 22 chr17 37412063 37412199 -57860452 - RMER10B LTR ERVL -4 394 250 8 870 645 252 7 7 chr17 37412493 37412633 -57860018 + B1_Mus2 SINE Alu 3 142 -5 8 870 405 0 0 0 chr17 37412957 37413002 -57859649 + (T)n Simple_repeat Simple_repeat 1 45 0 8 870 788 237 16 36 chr17 37413009 37413202 -57859449 + B3 SINE B2 1 189 -27 8 870 309 219 0 0 chr17 37413203 37413276 -57859375 + GA-rich Low_complexity Low_complexity 3 75 0 9 870 740 122 0 8 chr17 37413260 37413384 -57859267 + (GAAA)n Simple_repeat Simple_repeat 4 126 0 9 870 2263 212 105 28 chr17 37413854 37414397 -57858254 + RMER4B LTR ERVK 1 585 0 9 870 270 0 0 0 chr17 37415529 37415559 -57857092 + (CA)n Simple_repeat Simple_repeat 1 30 0 9 870 1154 263 56 32 chr17 37416008 37416346 -57856305 - MTEb LTR MaLR -2 377 32 9 870 2897 51 5 13 chr17 37417877 37418254 -57854397 - L1Md_F3 LINE L1 -1 6583 6210 9 870 243 0 0 0 chr17 37420509 37420536 -57852115 + (T)n Simple_repeat Simple_repeat 1 27 0 9 870 234 0 0 0 chr17 37421188 37421214 -57851437 + (TG)n Simple_repeat Simple_repeat 1 26 0 9 870 265 281 70 28 chr17 37421228 37421371 -57851280 - L1M4 LINE L1 -414 5770 5622 9 870 23 54 0 0 chr17 37421777 37421814 -57850837 + AT_rich Low_complexity Low_complexity 1 37 0 9 870 468 86 0 0 chr17 37421818 37421888 -57850763 + (TATG)n Simple_repeat Simple_repeat 2 71 0 9 870 601 261 8 0 chr17 37421897 37422016 -57850635 - RSINE1 SINE B4 -34 131 12 9 870 6679 116 27 122 chr17 37423449 37424636 -57848015 - L1_Mus3 LINE L1 -6 6632 5436 9 870 1853 112 25 25 chr17 37424636 37424958 -57847693 + RLTRETN_Mm LTR ERVK 1 322 0 9 870 6679 116 27 122 chr17 37424958 37425784 -57846867 - L1_Mus3 LINE L1 -6 5435 4601 9 870 12155 21 1 0 chr17 37425787 37427941 -57844710 - L1Md_A LINE L1 0 6582 4427 9 870 37332 42 4 5 chr17 37427942 37434225 -57838426 - L1Md_A LINE L1 0 6582 306 9 870 8042 156 24 30 chr17 37434225 37435775 -57836876 + RLTR22_Mur LTR ERVK 267 1671 -177 9 870 321 283 65 9 chr17 37435775 37435882 -57836769 + PB1D7 SINE Alu 1 113 -7 9 870 21 36 0 0 chr17 37435895 37435923 -57836728 + AT_rich Low_complexity Low_complexity 1 28 0 9 870 829 280 112 33 chr17 37437830 37438562 -57834089 + L1MA4 LINE L1 5124 5926 -374 9 870 459 0 0 0 chr17 37439154 37439205 -57833446 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 9 870 627 349 9 14 chr17 37439205 37439420 -57833231 - B4A SINE B4 -77 215 2 9 870 290 293 0 0 chr17 37439477 37439535 -57833116 - PB1D10 SINE Alu -54 63 6 9 870 1139 107 0 11 chr17 37440067 37440246 -57832405 + (TTCTC)n Simple_repeat Simple_repeat 1 177 0 9 870 450 53 0 0 chr17 37440248 37440305 -57832346 + (TCTCC)n Simple_repeat Simple_repeat 3 59 0 9 870 307 300 0 0 chr17 37441665 37441725 -57830926 - B4A SINE B4 -147 145 86 9 870 558 356 32 14 chr17 37441827 37442112 -57830539 + B4A SINE B4 3 292 0 9 870 455 285 56 25 chr17 37442285 37442483 -57830168 - L1M2 LINE L1 -1414 4729 4526 9 870 486 33 0 0 chr17 37443070 37443130 -57829521 + (CAAAT)n Simple_repeat Simple_repeat 2 61 0 9 870 2912 253 101 68 chr17 37443368 37445000 -57827651 + RMER1A Other Other 1 859 -171 9 870 564 15 0 0 chr17 37445000 37445065 -57827586 + (TC)n Simple_repeat Simple_repeat 2 66 0 9 870 2912 211 121 90 chr17 37445065 37445169 -57827482 + RMER1A Other Other 860 1019 -11 9 870 357 209 83 83 chr17 37445529 37445649 -57827002 - B3 SINE B2 0 216 97 9 870 448 283 103 0 chr17 37446185 37446330 -57826321 - Lx8 LINE L1 -149 7324 7165 9 870 5205 127 13 23 chr17 37446829 37447700 -57824951 + RLTR22_Mur LTR ERVK 1 862 -986 9 870 228 86 0 0 chr17 37447725 37447760 -57824891 + (T)n Simple_repeat Simple_repeat 1 35 0 9 870 3700 176 8 115 chr17 37447773 37448057 -57824594 + RLTR22_Mur LTR ERVK 837 1117 -731 9 870 1057 83 20 20 chr17 37448057 37448204 -57824447 - B1_Mus1 SINE Alu 0 148 2 9 870 3700 176 8 115 chr17 37448204 37448241 -57824410 + RLTR22_Mur LTR ERVK 1118 1145 -703 9 870 1557 17 0 0 chr17 37448241 37448421 -57824230 + (TTC)n Simple_repeat Simple_repeat 1 180 0 9 870 3700 176 8 115 chr17 37448421 37448434 -57824217 + RLTR22_Mur LTR ERVK 1146 1153 -695 9 870 4191 73 0 14 chr17 37448434 37449002 -57823649 - L1Md_F2 LINE L1 -2 6580 6021 9 870 3700 200 24 108 chr17 37449002 37449735 -57822916 + RLTR22_Mur LTR ERVK 750 1654 -194 9 870 422 231 37 46 chr17 37449735 37449844 -57822807 + PB1D10 SINE Alu 3 110 -7 9 870 25 0 0 0 chr17 37449852 37449877 -57822774 + AT_rich Low_complexity Low_complexity 1 25 0 9 870 23 78 0 0 chr17 37451570 37451621 -57821030 + AT_rich Low_complexity Low_complexity 1 51 0 9 870 644 288 114 35 chr17 37452027 37452772 -57819879 + L1MA4 LINE L1 5082 5948 -352 9 870 2067 125 0 59 chr17 37454344 37454683 -57817968 + ORR1A2 LTR MaLR 1 319 -8 9 870 271 333 0 0 chr17 37454695 37454755 -57817896 - B4A SINE B4 -147 145 86 9 870 806 315 36 11 chr17 37454864 37455140 -57817511 + B4A SINE B4 10 292 0 9 870 246 215 0 0 chr17 37455202 37455267 -57817384 - L1M2 LINE L1 -1306 4837 4773 9 870 186 71 0 0 chr17 37455570 37455598 -57817053 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 9 870 1118 72 0 0 chr17 37455598 37455736 -57816915 - B1_Mus2 SINE Alu -9 138 1 9 870 688 331 48 64 chr17 37455736 37456375 -57816276 + RNERVK23-int LTR ERVK 884 1512 -6705 9 870 2068 254 74 1 chr17 37456411 37457250 -57815401 + RNERVK23-int LTR ERVK 2782 3681 -4536 9 870 8149 106 5 12 chr17 37457251 37459218 -57813433 + L1Md_A LINE L1 446 2377 -3506 9 870 3651 46 4 9 chr17 37459218 37459678 -57812973 + L1Md_F2 LINE L1 6113 6570 -12 9 870 11457 275 37 23 chr17 37459678 37463772 -57808879 + RNERVK23-int LTR ERVK 3665 7814 -403 9 870 554 221 24 54 chr17 37464465 37464632 -57808019 + RNLTR23 LTR ERVK 481 642 0 9 870 9569 115 12 23 chr17 37464632 37466150 -57806501 + RLTR22_Mur LTR ERVK 23 1523 -325 9 870 11978 9 1 0 chr17 37466150 37467598 -57805053 - L1_Mm LINE L1 -1756 4127 2679 9 870 3515 18 0 0 chr17 37467598 37467997 -57804654 + L1Md_A LINE L1 6184 6582 0 9 870 2416 116 0 0 chr17 37468036 37468381 -57804270 + RLTR22_Mur LTR ERVK 1504 1848 0 9 870 982 30 68 0 chr17 37468682 37468814 -57803837 + L1Md_F3 LINE L1 6430 6570 -14 9 870 405 0 0 0 chr17 37468820 37468865 -57803786 + (CAAAT)n Simple_repeat Simple_repeat 2 46 0 9 870 1296 309 51 42 chr17 37469094 37469896 -57802755 + RMER1B Other Other 1 534 -532 9 870 3314 205 88 97 chr17 37469897 37470761 -57801890 + RMER1A Other Other 61 869 -161 9 870 330 26 0 0 chr17 37470761 37470800 -57801851 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 870 3314 205 88 97 chr17 37470800 37470906 -57801745 + RMER1A Other Other 870 1021 -9 9 870 198 103 0 0 chr17 37471121 37471150 -57801501 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 9 870 248 70 0 23 chr17 37471181 37471225 -57801426 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 9 870 21 0 0 0 chr17 37471239 37471260 -57801391 + AT_rich Low_complexity Low_complexity 1 21 0 9 870 670 262 87 0 chr17 37471321 37471493 -57801158 - B3 SINE B2 -28 188 2 9 870 368 280 251 0 chr17 37471995 37472170 -57800481 - Lx8 LINE L1 -184 7289 7071 9 870 30 27 0 0 chr17 37472318 37472355 -57800296 + AT_rich Low_complexity Low_complexity 1 37 0 9 870 428 284 55 0 chr17 37472582 37472691 -57799960 + PB1D7 SINE Alu 1 115 -5 9 870 23 0 0 0 chr17 37472699 37472722 -57799929 + AT_rich Low_complexity Low_complexity 1 23 0 9 870 753 43 0 0 chr17 37474259 37474352 -57798299 + (GGA)n Simple_repeat Simple_repeat 3 95 0 9 870 346 232 10 39 chr17 37477210 37477313 -57795338 + Charlie1a DNA MER1_type 470 569 -886 9 870 527 251 113 64 chr17 37477322 37477526 -57795125 + B4A SINE B4 28 241 -51 9 870 339 25 0 0 chr17 37477527 37477567 -57795084 + (CA)n Simple_repeat Simple_repeat 2 41 0 9 870 918 207 26 65 chr17 37477568 37477800 -57794851 - MTC LTR MaLR 0 421 199 9 870 5693 154 30 0 chr17 37477803 37478762 -57793889 - Lx2B LINE L1 -4 6996 6009 9 870 3385 136 5 14 chr17 37478774 37479362 -57793289 - L1_Mm LINE L1 -1027 4856 4274 9 870 10449 69 1 4 chr17 37479358 37481514 -57791137 - L1Md_F2 LINE L1 -2 6580 4430 9 870 16578 88 5 8 chr17 37481515 37483986 -57788665 + L1Md_F2 LINE L1 1979 4441 -1442 9 870 13001 141 28 5 chr17 37483985 37486393 -57786258 - L1Md_F2 LINE L1 -1596 4287 1824 9 108 36112 40 1 3 chr17 37486400 37492581 -57780070 - L1Md_T LINE L1 0 6585 321 9 871 4263 116 12 8 chr17 37492583 37493824 -57778827 - L1VL2 LINE L1 -2075 1540 296 9 871 24 0 0 0 chr17 37493834 37493858 -57778793 + AT_rich Low_complexity Low_complexity 1 24 0 9 871 3892 201 59 39 chr17 37493858 37494847 -57777804 - Lx3C LINE L1 -2 6974 5967 9 871 574 318 40 0 chr17 37494951 37495102 -57777549 + RSINE1 SINE B4 1 157 -8 9 871 192 77 0 0 chr17 37495110 37495136 -57777515 + (TG)n Simple_repeat Simple_repeat 1 26 0 9 871 28 0 0 0 chr17 37495137 37495165 -57777486 + AT_rich Low_complexity Low_complexity 1 28 0 9 871 311 302 45 20 chr17 37495490 37495670 -57776981 + L1M3 LINE L1 5597 5779 -512 9 871 266 333 122 20 chr17 37496152 37496299 -57776352 - MER45A DNA Tip100 -8 170 9 9 871 194 299 60 0 chr17 37497328 37497395 -57775256 - L3 LINE CR1 -239 4250 4180 9 871 1183 139 0 26 chr17 37498140 37498332 -57774319 + B2_Mm2 SINE B2 1 187 -8 9 871 874 120 0 0 chr17 37500434 37500567 -57772084 - L1_Mus1 LINE L1 0 6567 6435 1 871 285 285 36 51 chr17 37501225 37501362 -57771289 - ID_B1 SINE B4 0 224 90 2 871 207 0 0 0 chr17 37501660 37501683 -57770968 + (TGGGGG)n Simple_repeat Simple_repeat 1 23 0 3 871 12659 68 29 17 chr17 37501686 37503461 -57769190 - RLTR22_Mus LTR ERVK -11 1797 1 4 871 303 265 50 10 chr17 37503565 37503664 -57768987 - MTE-int LTR MaLR -2 1578 1476 5 871 432 0 0 0 chr17 37503934 37503982 -57768669 + (A)n Simple_repeat Simple_repeat 1 48 0 6 871 30438 98 18 7 chr17 37504062 37510148 -57762503 - L1_Mus2 LINE L1 0 6566 409 7 871 212 316 0 0 chr17 37510150 37510207 -57762444 + CT-rich Low_complexity Low_complexity 2 58 0 8 871 954 130 11 6 chr17 37510208 37510386 -57762265 + (TTCTCC)n Simple_repeat Simple_repeat 2 180 0 9 871 461 105 561 0 chr17 37511000 37511114 -57761537 + B2_Mm1t SINE B2 2 179 -14 1 871 446 73 398 20 chr17 37511180 37511278 -57761373 + B2_Mm2 SINE B2 47 181 -14 1 871 383 288 118 53 chr17 37511688 37511875 -57760776 + MER34 LTR ERV1 329 527 -15 1 871 7920 45 2 4 chr17 37512100 37513658 -57758993 - L1Md_F2 LINE L1 -1 6581 5028 1 871 328 343 0 29 chr17 37514264 37514366 -57758285 + RSINE1 SINE B4 1 99 -66 1 871 23 33 0 0 chr17 37514391 37514421 -57758230 + AT_rich Low_complexity Low_complexity 1 30 0 1 871 438 285 46 7 chr17 37514855 37515007 -57757644 + L1M2 LINE L1 5622 5779 -512 1 871 291 136 0 0 chr17 37515009 37515068 -57757583 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 871 333 0 0 0 chr17 37515071 37515108 -57757543 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 871 231 333 18 36 chr17 37515613 37515725 -57756926 - MER45A DNA Tip100 -16 162 53 1 871 348 64 0 0 chr17 37516380 37516427 -57756224 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 871 226 26 25 50 chr17 37517327 37517367 -57755284 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 2 871 1110 88 0 7 chr17 37517368 37517516 -57755135 - B1_Mus1 SINE Alu -1 147 1 2 871 3898 40 0 2 chr17 37518835 37519306 -57753345 + L1Md_F3 LINE L1 6113 6582 -2 2 871 21 0 0 0 chr17 37520880 37520901 -57751750 + AT_rich Low_complexity Low_complexity 1 21 0 2 871 222 352 14 40 chr17 37521388 37521462 -57751189 - ID4_ SINE ID -7 76 5 2 871 223 242 106 48 chr17 37521482 37521586 -57751065 - B1F SINE Alu 0 149 40 2 871 855 229 6 0 chr17 37522143 37522313 -57750338 - RLTR20B3 LTR ERVK -42 535 365 2 871 259 177 32 0 chr17 37522407 37522469 -57750182 + L1MA5 LINE L1 6218 6281 -19 2 871 6831 94 23 1 chr17 37522851 37524239 -57748412 + L1_Mus2 LINE L1 5147 6565 -1 2 871 466 404 25 0 chr17 37525229 37525390 -57747261 + RSINE1 SINE B4 1 165 0 3 871 32 0 0 0 chr17 37525405 37525437 -57747214 + AT_rich Low_complexity Low_complexity 1 32 0 3 871 629 93 21 0 chr17 37525462 37525559 -57747092 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 3 871 208 135 0 0 chr17 37525561 37525598 -57747053 + (T)n Simple_repeat Simple_repeat 1 37 0 3 871 1152 75 0 0 chr17 37525600 37525747 -57746904 - B1_Mm SINE Alu 0 147 1 3 871 438 271 45 19 chr17 37526142 37526312 -57746339 + L1M3 LINE L1 5611 5785 -389 3 871 474 49 0 0 chr17 37526312 37526373 -57746278 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 871 2669 109 2 10 chr17 37528388 37528787 -57743864 + Lx LINE L1 6259 6654 0 3 871 23 0 0 0 chr17 37529164 37529187 -57743464 + AT_rich Low_complexity Low_complexity 1 23 0 3 871 282 186 50 20 chr17 37529252 37529351 -57743300 + A-rich Low_complexity Low_complexity 3 104 0 3 871 6665 70 2 2 chr17 37530217 37531081 -57741570 + L1_Mus1 LINE L1 5704 6567 0 4 871 22 0 0 0 chr17 37531095 37531117 -57741534 + AT_rich Low_complexity Low_complexity 1 22 0 4 871 237 283 29 143 chr17 37533433 37533573 -57739078 - PB1 SINE Alu -3 124 1 4 871 324 255 42 11 chr17 37533965 37534060 -57738591 - MTE-int LTR MaLR -2 1578 1481 4 871 303 287 56 80 chr17 37534140 37534265 -57738386 + ORR1E LTR MaLR 64 185 -174 4 871 230 232 36 0 chr17 37534372 37534428 -57738223 + CT-rich Low_complexity Low_complexity 3 60 0 4 871 372 318 113 32 chr17 37535365 37535550 -57737101 + MER34 LTR ERV1 325 524 -18 4 871 22 0 0 0 chr17 37535690 37535712 -57736939 + AT_rich Low_complexity Low_complexity 1 22 0 4 871 21 0 0 0 chr17 37536607 37536628 -57736023 + AT_rich Low_complexity Low_complexity 1 21 0 4 871 245 320 150 63 chr17 37536753 37537064 -57735587 - L2 LINE L2 -1216 2203 1862 4 871 1382 129 34 4 chr17 37537064 37537297 -57735354 + Lx LINE L1 6414 6653 -1 5 871 245 320 150 63 chr17 37537297 37537318 -57735333 - L2 LINE L2 -1558 1861 1842 4 871 288 312 90 18 chr17 37537697 37537808 -57734843 + MER5A DNA MER1_type 43 161 -17 5 871 985 241 19 33 chr17 37538572 37538843 -57733808 - L1_Mus3 LINE L1 -3 7457 7191 5 871 373 266 0 2 chr17 37538838 37538941 -57733710 + Lx6 LINE L1 7118 7202 -258 5 871 992 108 89 0 chr17 37539580 37539793 -57732858 - L1_Mus3 LINE L1 -6 6560 6347 5 871 2452 40 0 3 chr17 37540623 37540923 -57731728 - L1Md_F2 LINE L1 -690 5894 5596 5 871 5484 44 19 0 chr17 37540923 37541599 -57731052 + L1Md_F2 LINE L1 5893 6581 -1 5 871 1281 281 30 25 chr17 37543521 37543886 -57728765 + MTEb LTR MaLR 5 371 -8 5 871 1843 290 65 65 chr17 37545519 37545569 -57727082 - Lx9 LINE L1 -142 7502 7458 5 871 354 98 0 0 chr17 37545569 37545620 -57727031 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 871 1843 290 65 65 chr17 37545620 37546052 -57726599 - Lx9 LINE L1 -187 7457 7013 5 871 1961 139 14 66 chr17 37546052 37546399 -57726252 + ORR1A4 LTR MaLR 1 329 0 5 871 1843 290 65 65 chr17 37546399 37546711 -57725940 - Lx9 LINE L1 -632 7012 6707 5 871 343 274 34 118 chr17 37546918 37547096 -57725555 - ORR1D1 LTR MaLR -143 241 79 5 871 362 134 15 0 chr17 37547096 37547163 -57725488 + (TCC)n Simple_repeat Simple_repeat 3 70 0 6 871 588 231 0 24 chr17 37547203 37547327 -57725324 - B1_Mus2 SINE Alu -17 130 10 6 871 272 264 17 117 chr17 37547221 37547341 -57725310 - MT2B LTR ERVL -337 264 157 6 871 585 199 109 36 chr17 37547747 37547991 -57724660 - ORR1D1-int LTR MaLR -30 1340 1178 5 871 226 265 188 0 chr17 37548093 37548210 -57724441 + L2 LINE L2 2232 2370 -1049 6 871 419 251 125 38 chr17 37549369 37549609 -57723042 + Ricksha_c DNA MuDR 1745 2005 -43 6 871 687 272 121 0 chr17 37549659 37549832 -57722819 + B4A SINE B4 99 292 0 6 871 468 200 0 0 chr17 37549832 37549937 -57722714 + (CA)n Simple_repeat Simple_repeat 1 105 0 6 871 3753 111 36 97 chr17 37550808 37551606 -57721045 - RMER17A LTR ERVK 0 751 2 6 871 192 179 0 0 chr17 37552911 37552950 -57719701 + (TATATG)n Simple_repeat Simple_repeat 2 40 0 6 871 1423 220 95 0 chr17 37553684 37554021 -57718630 + L1_Mus1 LINE L1 591 959 -5657 6 871 315 0 0 0 chr17 37554021 37554056 -57718595 + (A)n Simple_repeat Simple_repeat 1 35 0 7 871 1163 56 0 0 chr17 37554070 37554214 -57718437 + B1_Mus1 SINE Alu 5 148 0 7 871 351 65 0 0 chr17 37554543 37554589 -57718062 + (A)n Simple_repeat Simple_repeat 1 46 0 7 871 14316 115 6 35 chr17 37554589 37556618 -57716033 + L1_Mus1 LINE L1 940 2919 -2964 6 871 982 135 0 0 chr17 37556618 37556766 -57715885 + B1_Mus1 SINE Alu 1 148 0 7 871 12458 111 7 34 chr17 37556766 37557617 -57715034 + L1_Mus1 LINE L1 2920 3727 -2156 6 871 4404 130 1 4 chr17 37558178 37558910 -57713741 + L1_Mus1 LINE L1 3713 4442 -1441 6 871 34569 42 8 32 chr17 37558911 37560116 -57712535 + L1Md_A LINE L1 422 1593 -4290 7 871 1559 54 0 0 chr17 37560116 37560319 -57712332 + L1Md_A LINE L1 6380 6582 0 7 871 34569 23 1 4 chr17 37560319 37564273 -57708378 + L1Md_A LINE L1 1594 5534 -349 7 871 10217 19 0 1 chr17 37564273 37565510 -57707141 + L1Md_T LINE L1 4351 5586 -297 7 871 8333 38 1 0 chr17 37565511 37566503 -57706148 + L1Md_T LINE L1 5588 6580 -2 7 871 9014 112 8 17 chr17 37566533 37568079 -57704572 + L1_Mus1 LINE L1 4427 5967 -600 6 871 945 128 14 0 chr17 37568079 37568220 -57704431 + B1_Mus2 SINE Alu 5 147 0 7 871 6533 86 11 55 chr17 37568220 37568862 -57703789 + L1_Mus1 LINE L1 5968 6567 0 6 871 25 0 0 0 chr17 37568862 37568887 -57703764 + AT_rich Low_complexity Low_complexity 1 25 0 7 871 5753 46 0 0 chr17 37568907 37569606 -57703045 + L1Md_F2 LINE L1 5884 6582 0 7 871 180 314 173 19 chr17 37569738 37569842 -57702809 + L4 LINE RTE 1009 1128 -901 8 871 445 100 44 11 chr17 37570234 37570325 -57702326 + L1_Mus3 LINE L1 6542 6635 -3 8 871 240 298 133 9 chr17 37570843 37570948 -57701703 + MER5A DNA MER1_type 40 157 -32 8 871 21 36 0 0 chr17 37571221 37571249 -57701402 + AT_rich Low_complexity Low_complexity 1 28 0 8 871 195 100 0 0 chr17 37571363 37571393 -57701258 + (TC)n Simple_repeat Simple_repeat 2 31 0 8 871 237 309 24 8 chr17 37571468 37571592 -57701059 - Lx8 LINE L1 -1568 5905 5780 8 871 31 0 0 0 chr17 37571592 37571623 -57701028 + AT_rich Low_complexity Low_complexity 1 31 0 8 871 1190 129 10 34 chr17 37571639 37571848 -57700803 - L1Md_F2 LINE L1 -9 6573 6370 8 871 1827 232 5 12 chr17 37571854 37572269 -57700382 - Lx6 LINE L1 -8 7452 7041 8 871 3928 52 0 8 chr17 37572315 37572798 -57699853 - L1Md_F2 LINE L1 -13 6569 6091 8 871 1666 174 10 33 chr17 37572894 37573287 -57699364 - L1_Mur3 LINE L1 -2788 3092 2709 9 871 621 328 11 6 chr17 37573327 37573508 -57699143 - B3A SINE B2 -16 182 1 9 871 208 234 0 0 chr17 37573791 37573838 -57698813 + GA-rich Low_complexity Low_complexity 4 50 0 9 871 306 0 0 0 chr17 37574147 37574181 -57698470 + (TA)n Simple_repeat Simple_repeat 2 35 0 9 871 974 180 0 13 chr17 37574813 37574841 -57697810 + L1Md_F3 LINE L1 6020 6050 -534 9 871 419 40 0 108 chr17 37574841 37574924 -57697727 - L1Md_F2 LINE L1 -2 6580 6507 9 871 974 40 0 0 chr17 37574924 37575038 -57697613 + L1Md_F3 LINE L1 6051 6164 -420 9 871 4385 14 2 2 chr17 37575819 37576312 -57696339 - MT2_Mm LTR ERVL 0 493 1 9 871 302 0 0 0 chr17 37576312 37576350 -57696301 - MERVL-int LTR ERVL 0 5485 5448 9 871 390 167 46 35 chr17 37576350 37576437 -57696214 - ORR1A3-int LTR MaLR -1323 640 553 9 871 10092 26 1 0 chr17 37576437 37577647 -57695004 - MERVL-int LTR ERVL -125 5360 4150 9 871 32896 9 0 0 chr17 37577647 37581449 -57691202 - MERVL-int LTR ERVL -1683 3802 1 9 871 4385 14 2 2 chr17 37581449 37581942 -57690709 - MT2_Mm LTR ERVL 0 493 1 9 871 244 388 91 0 chr17 37581954 37582119 -57690532 - L2 LINE L2 -575 2844 2665 9 871 199 311 131 25 chr17 37582124 37582246 -57690405 - L2c LINE L2 -16 3371 3237 9 871 6749 98 2 2 chr17 37583555 37584675 -57687976 - L1_Mus2 LINE L1 0 6566 5447 1 871 10299 105 8 3 chr17 37584681 37587010 -57685641 - L1_Mus1 LINE L1 -1 6566 4228 1 871 1039 300 85 15 chr17 37587011 37587353 -57685298 + MTEb LTR MaLR 6 371 -8 1 871 451 276 53 11 chr17 37588979 37588991 -57683660 - Lx9 LINE L1 -143 7501 7490 1 871 369 0 0 0 chr17 37588991 37589032 -57683619 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 871 451 276 53 11 chr17 37589032 37589206 -57683445 - Lx9 LINE L1 -155 7489 7308 1 871 490 228 98 37 chr17 37589274 37589438 -57683213 - Lx9 LINE L1 -451 7193 7020 1 871 1328 187 56 118 chr17 37589472 37589812 -57682839 + ORR1A4 LTR MaLR 1 319 -10 1 871 966 272 21 3 chr17 37589818 37590109 -57682542 - Lx9 LINE L1 -637 7007 6712 1 871 231 175 0 0 chr17 37590327 37590384 -57682267 + CT-rich Low_complexity Low_complexity 3 59 0 1 871 237 299 52 116 chr17 37590387 37590403 -57682248 - B4A SINE B4 -46 246 229 1 871 1022 87 23 6 chr17 37590403 37590576 -57682075 + (TTCTCC)n Simple_repeat Simple_repeat 3 178 0 1 871 524 242 2 62 chr17 37590576 37590596 -57682055 - ID_B1 SINE B4 -64 228 98 1 871 714 195 0 0 chr17 37590596 37590714 -57681937 - B1_Mus1 SINE Alu -13 135 18 1 871 358 245 99 9 chr17 37590775 37590886 -57681765 + RMER10B LTR ERVL 278 398 0 1 871 230 240 64 107 chr17 37590956 37591096 -57681555 - ORR1D-int LTR MaLR 0 1963 1830 1 871 489 223 20 61 chr17 37591196 37591344 -57681307 + RLTR43A LTR ERVK 223 364 0 1 871 1000 196 40 26 chr17 37591349 37591575 -57681076 - ORR1D-int LTR MaLR -42 1328 1100 1 871 214 309 83 9 chr17 37591660 37591768 -57680883 + L2 LINE L2 2231 2346 -1073 1 871 253 261 98 7 chr17 37593079 37593222 -57679429 + Ricksha_c DNA MuDR 1828 1983 -65 1 871 25 22 0 43 chr17 37593222 37593237 -57679414 + AT_rich Low_complexity Low_complexity 1 15 0 1 871 1282 20 0 0 chr17 37593237 37593383 -57679268 - B1_Mm SINE Alu 0 147 2 1 871 25 22 0 43 chr17 37593383 37593414 -57679237 + AT_rich Low_complexity Low_complexity 1 30 0 1 871 922 99 4 7 chr17 37593433 37593586 -57679065 - L1_Mur1 LINE L1 -1787 4353 4177 1 871 7127 98 9 2 chr17 37593584 37594776 -57677875 + Lx3_Mus LINE L1 5472 6669 -340 1 871 259 176 31 75 chr17 37595089 37595249 -57677402 + (TTATA)n Simple_repeat Simple_repeat 1 153 0 1 871 21 57 0 0 chr17 37595250 37595285 -57677366 + AT_rich Low_complexity Low_complexity 1 35 0 1 871 776 162 49 0 chr17 37595405 37595547 -57677104 - B1_Mur3 SINE Alu 0 149 1 1 871 200 184 0 20 chr17 37596085 37596135 -57676516 + CT-rich Low_complexity Low_complexity 3 51 0 1 871 1345 224 67 16 chr17 37596230 37596543 -57676108 - Lx5 LINE L1 0 7050 6722 1 871 206 278 13 77 chr17 37598037 37598115 -57674536 - L2 LINE L2 -545 2874 2802 1 871 3253 36 0 5 chr17 37598295 37598687 -57673964 - L1Md_F3 LINE L1 -14 6570 6181 1 871 189 107 0 0 chr17 37599047 37599075 -57673576 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 871 401 329 70 28 chr17 37599851 37600064 -57672587 - L1MD2 LINE L1 -140 6219 5998 1 871 376 250 18 46 chr17 37600241 37600350 -57672301 - PB1D7 SINE Alu -14 106 1 1 871 303 298 60 0 chr17 37600351 37600502 -57672149 - L1MD2 LINE L1 -415 5827 5668 1 871 2038 32 4 4 chr17 37600739 37600991 -57671660 - L1Md_F3 LINE L1 -2 6582 6331 1 871 408 279 30 85 chr17 37600994 37601194 -57671457 - L1M5 LINE L1 -2911 3235 3047 1 871 546 274 44 7 chr17 37601246 37601382 -57671269 - B1_Mur1 SINE Alu 0 149 9 1 871 267 261 21 11 chr17 37601395 37601488 -57671163 - L1MA5 LINE L1 -46 6254 6161 1 871 266 318 68 16 chr17 37601907 37602099 -57670552 - L1M5 LINE L1 -3429 2717 2516 1 871 23 0 0 0 chr17 37603091 37603114 -57669537 + AT_rich Low_complexity Low_complexity 1 23 0 1 871 23 0 0 0 chr17 37604260 37604283 -57668368 + AT_rich Low_complexity Low_complexity 1 23 0 1 871 393 22 0 0 chr17 37604390 37604436 -57668215 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 871 336 309 21 0 chr17 37604827 37604921 -57667730 + MER77 LTR ERVL 466 561 -46 1 871 1206 56 6 22 chr17 37605446 37605628 -57667023 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 1 871 200 195 49 0 chr17 37605874 37605915 -57666736 - L3 LINE CR1 -3507 982 940 1 871 328 302 82 14 chr17 37605933 37606141 -57666510 + L1MA6 LINE L1 5925 6146 -154 1 871 24 0 0 0 chr17 37606479 37606503 -57666148 + AT_rich Low_complexity Low_complexity 1 24 0 1 871 436 368 43 16 chr17 37606683 37606871 -57665780 + RMER15 LTR ERVL 370 562 -13 1 871 552 239 87 89 chr17 37606945 37607282 -57665369 - L1MA8 LINE L1 -22 6290 5957 1 871 191 32 0 61 chr17 37607619 37607652 -57664999 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 871 778 189 183 86 chr17 37607668 37607865 -57664786 - B3 SINE B2 0 216 1 1 871 575 194 9 9 chr17 37607942 37608051 -57664600 + MTD LTR MaLR 311 419 0 1 871 330 298 89 20 chr17 37608112 37608314 -57664337 + Ricksha DNA MuDR 2089 2304 -942 1 871 240 277 12 12 chr17 37608460 37608544 -57664107 - Lx2B LINE L1 -1 6996 6913 1 871 884 210 111 143 chr17 37608544 37608950 -57663701 + RLTR9C LTR ERVK 1 393 0 1 871 246 243 0 176 chr17 37608950 37609115 -57663536 - Lx2B LINE L1 -83 6917 6782 1 871 2691 161 2 6 chr17 37609079 37609603 -57663048 + L1Md_T LINE L1 615 1136 -5588 1 871 4264 148 29 35 chr17 37609600 37610505 -57662146 + L1Md_F LINE L1 210 1108 -5411 1 871 33810 31 0 0 chr17 37610511 37614928 -57657723 + L1Md_T LINE L1 1170 5586 -297 1 871 8065 53 0 0 chr17 37614928 37615923 -57656728 + L1Md_T LINE L1 5587 6581 -1 1 871 24 0 0 0 chr17 37615951 37615975 -57656676 + AT_rich Low_complexity Low_complexity 1 24 0 1 871 2882 204 12 9 chr17 37615975 37616559 -57656092 - Lx2B LINE L1 -186 6814 6229 1 871 1041 225 32 12 chr17 37617028 37617275 -57655376 + Lx5 LINE L1 6796 7047 -3 1 108 1059 300 54 2 chr17 37617332 37617796 -57654855 + Ricksha DNA MuDR 2509 2996 -250 1 872 510 17 0 0 chr17 37617829 37617888 -57654763 + (TTCC)n Simple_repeat Simple_repeat 3 61 0 1 872 222 191 0 0 chr17 37617889 37617936 -57654715 + CT-rich Low_complexity Low_complexity 2 48 0 1 872 315 272 10 0 chr17 37618002 37618105 -57654546 + Ricksha DNA MuDR 3143 3246 0 1 872 414 0 0 0 chr17 37619166 37619212 -57653439 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 872 187 174 28 28 chr17 37619258 37619329 -57653322 + (CAGAGA)n Simple_repeat Simple_repeat 2 72 0 1 872 406 268 228 15 chr17 37620781 37620967 -57651684 - Charlie1 DNA MER1_type -31 2750 2522 1 872 189 74 0 0 chr17 37620967 37620994 -57651657 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 872 406 251 223 7 chr17 37620994 37621217 -57651434 - Charlie1 DNA MER1_type -260 2521 2255 1 872 570 279 116 16 chr17 37622302 37622620 -57650031 + L1M2 LINE L1 4026 4380 -1763 1 872 207 0 0 0 chr17 37622620 37622643 -57650008 + (TC)n Simple_repeat Simple_repeat 2 24 0 1 872 570 279 116 16 chr17 37622643 37622816 -57649835 + L1M2 LINE L1 4381 4565 -1578 1 872 325 323 90 25 chr17 37622823 37623144 -57649507 + L1M2 LINE L1 4722 5063 -1080 1 872 5377 141 12 18 chr17 37623236 37624070 -57648581 + RMER12 LTR ERVK 1 826 -496 1 872 2835 22 0 0 chr17 37624070 37624392 -57648259 - RLTRETN_Mm LTR ERVK 0 322 1 1 872 5377 184 42 42 chr17 37624392 37624540 -57648111 + RMER12 LTR ERVK 827 1047 -275 1 872 4410 101 8 6 chr17 37624569 37625207 -57647444 - L1_Mus3 LINE L1 -11 6627 5989 1 872 259 103 0 0 chr17 37625207 37625246 -57647405 - L1_Mus3 LINE L1 -719 5919 5881 1 872 9959 123 30 11 chr17 37625245 37627695 -57644956 - L1VL1 LINE L1 -995 2703 203 1 872 1724 127 3 40 chr17 37627691 37627754 -57644897 - L1_Mur1 LINE L1 -1356 4530 4468 1 872 183 42 0 0 chr17 37627754 37627778 -57644873 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1 872 1724 127 3 40 chr17 37627778 37628043 -57644608 - L1_Mur1 LINE L1 -1419 4467 4214 1 872 3064 161 15 6 chr17 37628028 37628576 -57644075 + Lx3A LINE L1 6163 6715 -266 1 872 25 0 0 0 chr17 37630092 37630117 -57642534 + AT_rich Low_complexity Low_complexity 1 25 0 1 872 671 35 12 0 chr17 37630460 37630546 -57642105 + (TTCC)n Simple_repeat Simple_repeat 2 88 0 1 872 522 0 0 0 chr17 37630546 37630604 -57642047 + (TTC)n Simple_repeat Simple_repeat 3 60 0 1 872 405 102 0 0 chr17 37630601 37630660 -57641991 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 872 190 360 112 5 chr17 37631558 37631745 -57640906 + L2 LINE L2 2323 2529 -890 1 872 677 230 0 26 chr17 37633679 37633831 -57638820 + B1_Mur1 SINE Alu 1 148 -1 1 872 1647 226 73 42 chr17 37634020 37634404 -57638247 + MTD LTR MaLR 24 419 0 1 872 504 292 31 0 chr17 37634690 37634820 -57637831 - RSINE1 SINE B4 -31 134 1 1 872 314 276 35 50 chr17 37634945 37635086 -57637565 - Lx8 LINE L1 -1697 5776 5638 1 872 489 314 125 51 chr17 37636868 37637204 -57635447 + RLTR9A LTR ERVK 8 368 0 1 872 1260 78 6 0 chr17 37637537 37637716 -57634935 + L1Md_F2 LINE L1 6400 6579 -3 1 872 231 36 0 0 chr17 37637720 37637748 -57634903 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 1 872 1773 176 150 37 chr17 37638000 37638461 -57634190 + ETnERV2-int LTR ERVK 263 775 -4631 1 872 578 202 16 16 chr17 37638450 37638571 -57634080 - ETnERV2-int LTR ERVK -3151 4255 4135 1 872 7934 239 40 25 chr17 37638630 37641079 -57631572 + ETnERV2-int LTR ERVK 1089 5794 -1612 1 872 1098 176 5 0 chr17 37641116 37641303 -57631348 + RMER16-int LTR ERVK 3795 3982 -1424 1 872 718 284 44 32 chr17 37641562 37641901 -57630750 + RLTR6-int LTR ERV1 7328 7670 -108 1 872 265 284 20 95 chr17 37642010 37642158 -57630493 + ETnERV2-int LTR ERVK 6374 6510 -32 1 872 460 309 119 50 chr17 37642318 37642655 -57629996 + RLTR9A LTR ERVK 9 368 0 1 872 2903 138 26 11 chr17 37642938 37643407 -57629244 - MT2B LTR ERVL 0 601 126 1 872 4394 135 71 8 chr17 37643399 37644163 -57628488 - RLTR22_Mur LTR ERVK -41 1807 996 1 872 215 139 28 0 chr17 37644257 37644293 -57628358 + GA-rich Low_complexity Low_complexity 2 38 0 1 872 189 0 0 0 chr17 37644308 37644329 -57628322 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 872 255 320 107 23 chr17 37644486 37644617 -57628034 - RMER4B LTR ERVK -97 488 347 1 872 3004 345 44 42 chr17 37644672 37646742 -57625909 - RodERV21-int LTR ERV1 -198 4793 2718 1 872 7647 57 0 3 chr17 37646868 37647890 -57624761 - L1Md_F2 LINE L1 -12 6570 5554 1 872 6470 58 2 5 chr17 37647937 37648747 -57623904 + L1_Mus2 LINE L1 5759 6566 0 1 872 320 256 26 26 chr17 37648987 37649180 -57623471 - MER52-int LTR ERV1 -1987 5104 4978 1 872 2874 268 15 6 chr17 37649692 37650416 -57622235 - RodERV21-int LTR ERV1 -2550 2441 1711 1 872 3557 81 2 13 chr17 37650419 37650894 -57621757 - L1_Mus1 LINE L1 0 6567 6098 1 872 20620 117 8 30 chr17 37650895 37654492 -57618159 - L1_Mm LINE L1 -966 4917 1401 1 872 276 261 78 9 chr17 37654909 37655025 -57617626 + L1M2 LINE L1 3710 3833 -2307 1 872 244 434 9 0 chr17 37655081 37655187 -57617464 - MT2A LTR ERVL -78 455 349 1 872 812 309 111 24 chr17 37655187 37655519 -57617132 - MT2A LTR ERVL -98 435 75 1 872 342 340 115 6 chr17 37655426 37655583 -57617068 - MTE2a LTR MaLR -204 175 2 2 872 973 324 46 14 chr17 37655583 37656322 -57616329 + L1M2 LINE L1 3831 4593 -1550 1 872 308 242 11 11 chr17 37656320 37656412 -57616239 - L1_Mur2 LINE L1 -2303 3574 3483 2 872 286 266 87 36 chr17 37656641 37656836 -57615815 - L1_Mur2 LINE L1 -3514 2366 2162 2 872 1176 29 0 0 chr17 37656878 37657018 -57615633 + (TTTC)n Simple_repeat Simple_repeat 3 142 0 2 872 2871 91 13 0 chr17 37657021 37657418 -57615233 - L1_Mus1 LINE L1 0 6567 6166 2 872 228 303 23 8 chr17 37657418 37657551 -57615100 - L1_Rod LINE L1 -3641 2206 2072 2 872 4342 122 9 1 chr17 37657623 37658274 -57614377 + Lx3A LINE L1 6309 6964 -17 2 872 387 0 0 0 chr17 37658274 37658317 -57614334 + (CAAG)n Simple_repeat Simple_repeat 2 44 0 2 872 207 163 23 23 chr17 37658317 37658337 -57614314 + A-rich Low_complexity Low_complexity 2 21 0 2 872 1068 83 30 0 chr17 37658337 37658505 -57614146 + (GGAA)n Simple_repeat Simple_repeat 1 173 0 2 872 207 163 23 23 chr17 37658505 37658528 -57614123 + A-rich Low_complexity Low_complexity 22 45 0 2 872 711 224 98 8 chr17 37658528 37658756 -57613895 + RMER12 LTR ERVK 1024 1322 0 2 872 1223 192 133 25 chr17 37658930 37659298 -57613353 + Lx3C LINE L1 6567 6974 -2 2 872 23 54 0 0 chr17 37659434 37659471 -57613180 + AT_rich Low_complexity Low_complexity 1 37 0 2 872 394 289 142 72 chr17 37659528 37659957 -57612694 + L1PB4 LINE L1 5438 5896 -260 2 872 201 129 0 0 chr17 37660001 37660032 -57612619 + (TCTCTG)n Simple_repeat Simple_repeat 3 33 0 2 872 7715 40 13 2 chr17 37660103 37661286 -57611365 - L1Md_F3 LINE L1 -1 6583 5388 2 872 2989 54 19 0 chr17 37661316 37661687 -57610964 - L1_Mus1 LINE L1 0 6567 6190 2 872 321 26 0 0 chr17 37663576 37663614 -57609037 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 2 872 182 118 0 29 chr17 37663961 37663996 -57608655 + (TTTC)n Simple_repeat Simple_repeat 3 36 0 2 872 519 221 0 0 chr17 37664949 37665044 -57607607 - RLTR31B_Mm LTR ERVK 0 557 463 2 872 21 0 0 0 chr17 37665601 37665622 -57607029 + AT_rich Low_complexity Low_complexity 1 21 0 2 872 25 0 0 0 chr17 37666157 37666182 -57606469 + AT_rich Low_complexity Low_complexity 1 25 0 2 872 3692 127 26 57 chr17 37668415 37669034 -57603617 - MT2B LTR ERVL -1 600 1 2 872 320 304 25 0 chr17 37669270 37669349 -57603302 + RSINE1 SINE B4 2 82 -83 2 872 333 0 0 0 chr17 37669403 37669440 -57603211 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 872 270 269 145 8 chr17 37669718 37669849 -57602802 + L1M2 LINE L1 3682 3830 -2310 2 872 312 127 0 0 chr17 37669896 37669951 -57602700 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 872 1001 293 80 36 chr17 37670038 37670399 -57602252 - MT2A LTR ERVL -98 435 59 2 872 393 305 130 19 chr17 37670292 37670446 -57602205 - MTE2a LTR MaLR -207 172 2 2 872 580 333 80 10 chr17 37670446 37670931 -57601720 + L1M2 LINE L1 3831 4349 -1794 2 872 1208 46 102 6 chr17 37670957 37671133 -57601518 - L1Md_F3 LINE L1 -2 6582 6390 2 872 1911 18 14 0 chr17 37671133 37671353 -57601298 + L1Md_F3 LINE L1 6167 6389 -195 2 872 672 265 27 14 chr17 37671351 37671573 -57601078 + L1_Mur3 LINE L1 4336 4560 -1320 2 872 323 253 11 11 chr17 37671573 37671665 -57600986 - L1_Mur2 LINE L1 -2303 3574 3483 2 872 263 271 49 59 chr17 37671672 37671774 -57600877 - B1F2 SINE Alu -46 103 3 2 872 322 286 56 11 chr17 37671890 37672070 -57600581 - L1_Rod LINE L1 -3462 2385 2198 2 872 468 51 0 0 chr17 37672130 37672189 -57600462 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 872 270 0 0 0 chr17 37672642 37672672 -57599979 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 2 872 240 154 0 0 chr17 37673170 37673222 -57599429 + (TA)n Simple_repeat Simple_repeat 1 52 0 2 872 279 0 0 0 chr17 37673268 37673299 -57599352 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 872 213 262 48 16 chr17 37673380 37673442 -57599209 - MER5A DNA MER1_type -80 109 46 2 872 594 338 76 36 chr17 37673445 37673721 -57598930 + B4A SINE B4 2 288 -4 2 872 208 376 102 8 chr17 37673849 37673967 -57598684 - MER5B DNA MER1_type -10 168 40 2 872 649 78 0 11 chr17 37674528 37674619 -57598032 + MTA_Mm LTR MaLR 1 90 -306 2 872 3042 112 63 48 chr17 37674609 37675145 -57597506 + MTA_Mm-int LTR MaLR 555 1098 0 2 872 2467 73 106 3 chr17 37675145 37675504 -57597147 + MTA_Mm LTR MaLR 1 396 0 2 872 26 0 0 0 chr17 37676631 37676657 -57595994 + AT_rich Low_complexity Low_complexity 1 26 0 2 872 598 258 42 32 chr17 37677404 37677597 -57595054 - RLTR31A_Mm LTR ERVK 0 561 369 2 872 1042 204 26 62 chr17 37677728 37677787 -57594864 - RLTR31A_Mm LTR ERVK -217 367 320 2 872 1060 20 20 40 chr17 37677787 37677939 -57594712 - L1Md_F3 LINE L1 0 6584 6436 2 872 1042 204 26 62 chr17 37677939 37678151 -57594500 - RLTR31A_Mm LTR ERVK -265 319 106 2 872 283 303 23 0 chr17 37678151 37678283 -57594368 - L1_Rod LINE L1 -3635 2212 2078 2 872 324 120 0 0 chr17 37678284 37678334 -57594317 + (T)n Simple_repeat Simple_repeat 1 50 0 2 872 231 264 85 8 chr17 37678422 37678552 -57594099 + L1_Mur3 LINE L1 4371 4510 -1370 2 872 1417 194 45 67 chr17 37678784 37678977 -57593674 - RMER17C LTR ERVK 0 410 234 2 872 555 66 0 0 chr17 37678977 37679053 -57593598 + (GA)n Simple_repeat Simple_repeat 1 76 0 2 872 1417 194 45 67 chr17 37679053 37679278 -57593373 - RMER17C LTR ERVK -177 233 2 2 872 423 269 59 77 chr17 37679290 37679464 -57593187 + MLT2D LTR ERVL 270 537 -23 2 872 855 154 22 0 chr17 37680523 37680659 -57591992 - B1_Mus2 SINE Alu 0 147 9 2 872 32 43 0 0 chr17 37680740 37680786 -57591865 + AT_rich Low_complexity Low_complexity 1 46 0 2 872 269 196 0 0 chr17 37681694 37681745 -57590906 - MTE2b LTR MaLR -13 366 316 2 872 2176 133 38 5 chr17 37681745 37682149 -57590502 + L1_Mus4 LINE L1 6111 6564 -2 2 872 746 246 67 63 chr17 37682230 37682469 -57590182 - MT2A LTR ERVL -77 456 217 2 872 1105 259 89 7 chr17 37682533 37682825 -57589826 - MTE2b LTR MaLR -61 318 3 2 872 2269 104 80 112 chr17 37683099 37683597 -57589054 - RLTR45 LTR ERVK 0 482 1 2 872 21 0 0 0 chr17 37684276 37684297 -57588354 + AT_rich Low_complexity Low_complexity 1 21 0 2 872 262 224 79 87 chr17 37684410 37684537 -57588114 - RLTR43B LTR ERVK -145 230 105 2 872 586 289 23 100 chr17 37684771 37684866 -57587785 + L1MA10 LINE L1 5958 6048 -286 2 872 1115 95 7 0 chr17 37684866 37685013 -57587638 + B1_Mus1 SINE Alu 1 148 0 2 872 586 289 23 100 chr17 37685013 37685217 -57587434 + L1MA10 LINE L1 6049 6234 -100 2 872 1201 301 84 28 chr17 37685214 37685381 -57587270 + L1MA8 LINE L1 5538 5703 -588 2 872 405 39 0 0 chr17 37685381 37685432 -57587219 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 872 1201 301 84 28 chr17 37685432 37685953 -57586698 + L1MA8 LINE L1 5704 6265 -26 2 872 585 264 20 139 chr17 37685953 37686155 -57586496 - MTEb LTR MaLR -201 178 1 2 872 2281 288 58 31 chr17 37686159 37686446 -57586205 + L1_Mur3 LINE L1 277 559 -7169 2 872 3480 15 2 0 chr17 37686446 37686841 -57585810 - MTA_Mm LTR MaLR 0 396 1 2 872 2281 245 59 17 chr17 37686841 37687714 -57584937 + L1_Mur3 LINE L1 560 1104 -6624 2 872 759 167 237 10 chr17 37687713 37687810 -57584841 - Lx5 LINE L1 -76 7384 7301 2 872 185 65 32 0 chr17 37687810 37687841 -57584810 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2 872 2682 184 17 9 chr17 37687841 37688306 -57584345 - Lx5 LINE L1 -160 7300 6441 2 872 3016 235 77 49 chr17 37688329 37689139 -57583512 - Lx7 LINE L1 -391 7305 6474 2 872 229 103 51 0 chr17 37689151 37689190 -57583461 - Lx7 LINE L1 -1395 6301 6261 2 872 35973 67 7 7 chr17 37689191 37695353 -57577298 - L1Md_F2 LINE L1 0 6582 446 2 872 2241 220 81 12 chr17 37695380 37696116 -57576535 - Lx7 LINE L1 -1462 6234 5453 2 872 417 361 88 38 chr17 37696143 37696460 -57576191 - MER44B DNA MER2_type -124 426 94 2 872 25 65 0 0 chr17 37696782 37696828 -57575823 + AT_rich Low_complexity Low_complexity 1 46 0 2 872 3030 38 16 0 chr17 37697142 37697515 -57575136 - L1Md_F3 LINE L1 -4 6580 6202 2 872 1337 71 27 5 chr17 37697550 37697734 -57574917 + B2_Mm2 SINE B2 1 188 -7 2 872 24 32 0 0 chr17 37699886 37699917 -57572734 + AT_rich Low_complexity Low_complexity 1 31 0 2 872 21 0 0 0 chr17 37700093 37700114 -57572537 + AT_rich Low_complexity Low_complexity 1 21 0 2 872 21 0 0 0 chr17 37702986 37703007 -57569644 + AT_rich Low_complexity Low_complexity 1 21 0 2 872 222 337 21 11 chr17 37703850 37703943 -57568708 - MER5A DNA MER1_type 0 189 96 2 872 1719 262 52 29 chr17 37704613 37705167 -57567484 + L1_Mur3 LINE L1 538 1104 -6624 2 872 1193 225 54 59 chr17 37705146 37705421 -57567230 + L1_Mur3 LINE L1 3944 4218 -1662 2 872 1487 100 17 21 chr17 37705421 37705657 -57566994 - L1Md_F2 LINE L1 0 6582 6348 2 872 1193 225 54 59 chr17 37705657 37705769 -57566882 + L1_Mur3 LINE L1 4219 4329 -1551 2 872 727 225 53 108 chr17 37705770 37706168 -57566483 - Lx7 LINE L1 -23 7673 7298 2 872 2635 218 82 12 chr17 37706180 37706752 -57565899 - Lx5 LINE L1 -3 7047 6436 2 872 2195 247 67 98 chr17 37706832 37707554 -57565097 - Lx7 LINE L1 -540 7156 6458 2 872 2571 218 63 22 chr17 37707555 37708358 -57564293 - Lx7 LINE L1 -1401 6295 5455 2 872 270 315 59 26 chr17 37708402 37708555 -57564096 - MER44B DNA MER2_type -138 412 255 2 872 822 120 26 93 chr17 37708893 37709086 -57563565 + RLTR22_Mur LTR ERVK 945 1124 -724 2 872 2081 37 0 0 chr17 37709092 37709338 -57563313 - L1Md_T LINE L1 0 6582 6337 2 872 1469 18 0 0 chr17 37709338 37709507 -57563144 + L1Md_A LINE L1 5735 5903 -679 2 872 2907 194 27 10 chr17 37709507 37710089 -57562562 + RLTR22_Mur LTR ERVK 1040 1670 -178 2 872 29 47 0 0 chr17 37710255 37710298 -57562353 + AT_rich Low_complexity Low_complexity 1 43 0 2 872 26 82 0 0 chr17 37710388 37710449 -57562202 + AT_rich Low_complexity Low_complexity 1 61 0 2 872 4355 56 11 14 chr17 37710563 37711129 -57561522 - LTRIS2 LTR ERV1 0 564 1 2 872 336 24 0 0 chr17 37713419 37713460 -57559191 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 872 33 85 0 0 chr17 37714117 37714199 -57558452 + AT_rich Low_complexity Low_complexity 1 82 0 2 872 226 344 11 0 chr17 37714832 37714925 -57557726 - MER5A DNA MER1_type 0 189 96 2 872 1723 261 48 23 chr17 37715613 37716134 -57556517 + L1_Mur3 LINE L1 549 1082 -6646 2 872 968 177 59 5 chr17 37716134 37716355 -57556296 + L1_Mur3 LINE L1 3957 4189 -1691 2 872 1271 208 66 6 chr17 37716386 37716735 -57555916 + L1_Mur3 LINE L1 3957 4326 -1554 2 872 719 214 64 165 chr17 37716739 37717158 -57555493 - Lx7 LINE L1 -23 7673 7297 2 872 2726 220 62 12 chr17 37717176 37717752 -57554899 - Lx5 LINE L1 -10 7040 6436 2 872 234 0 0 0 chr17 37717776 37717802 -57554849 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 872 2599 242 89 19 chr17 37717807 37718536 -57554115 - Lx7 LINE L1 -456 7240 6461 2 872 624 14 0 0 chr17 37718542 37718615 -57554036 + (TTAAG)n Simple_repeat Simple_repeat 1 73 0 2 872 2506 229 53 11 chr17 37718620 37719403 -57553248 - Lx7 LINE L1 -1421 6275 5454 2 872 1618 133 11 14 chr17 37719995 37720270 -57552381 + RLTR22_Mur LTR ERVK 984 1257 -591 2 872 27577 53 1 0 chr17 37720270 37724833 -57547818 - L1Md_F3 LINE L1 0 6584 2016 2 872 1921 223 38 30 chr17 37724833 37725363 -57547288 + RLTR22_Mus LTR ERVK 1008 1612 -196 3 872 2149 79 3 3 chr17 37725378 37725669 -57546982 - L1_Mus1 LINE L1 -1 6566 6276 3 872 21 82 0 0 chr17 37725768 37725817 -57546834 + AT_rich Low_complexity Low_complexity 1 49 0 3 872 25 0 0 0 chr17 37725912 37725937 -57546714 + AT_rich Low_complexity Low_complexity 1 25 0 3 872 183 162 0 0 chr17 37726076 37726113 -57546538 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 872 22 0 0 0 chr17 37726152 37726174 -57546477 + AT_rich Low_complexity Low_complexity 1 22 0 3 872 244 359 11 0 chr17 37729900 37729992 -57542659 - MER5A DNA MER1_type 0 189 97 3 872 7264 93 6 17 chr17 37730298 37732032 -57540619 + L1_Mus2 LINE L1 4849 6566 0 3 872 1785 247 48 7 chr17 37732389 37733297 -57539354 + L1_Mur3 LINE L1 538 1104 -6624 3 872 849 233 45 93 chr17 37733296 37733483 -57539168 - Lx7 LINE L1 -23 7673 7488 3 872 219 36 0 0 chr17 37733483 37733511 -57539140 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 872 849 233 45 93 chr17 37733511 37733720 -57538931 - Lx7 LINE L1 -209 7487 7296 3 872 2757 221 48 19 chr17 37733725 37734307 -57538344 - Lx5 LINE L1 0 7050 6452 3 872 2487 261 87 38 chr17 37734376 37735116 -57537535 - Lx7 LINE L1 -456 7240 6465 3 872 2638 226 32 16 chr17 37735126 37735916 -57536735 - Lx7 LINE L1 -1401 6295 5489 3 872 6606 90 28 12 chr17 37735916 37736925 -57535726 + MusHAL1 LINE L1 1051 2075 -637 3 872 1107 76 7 0 chr17 37737210 37737355 -57535296 - B1_Mm SINE Alu -1 146 1 3 872 39 38 0 0 chr17 37737673 37737726 -57534925 + AT_rich Low_complexity Low_complexity 1 53 0 3 872 336 118 0 0 chr17 37738125 37738176 -57534475 + L1Md_F2 LINE L1 284 334 -6282 3 872 33301 67 6 0 chr17 37738168 37743057 -57529594 + L1Md_F2 LINE L1 670 5586 -297 3 872 7944 50 7 3 chr17 37743057 37744048 -57528603 + L1Md_F2 LINE L1 5587 6581 -1 3 872 246 361 49 0 chr17 37744157 37744279 -57528372 + MLT1A0 LTR MaLR 15 142 -223 3 872 189 0 0 0 chr17 37744314 37744335 -57528316 + (TA)n Simple_repeat Simple_repeat 1 21 0 3 872 305 268 23 23 chr17 37744363 37744451 -57528200 - MTEa LTR MaLR -14 365 278 3 872 790 258 267 3 chr17 37745002 37745302 -57527349 - MTEa LTR MaLR 0 379 1 3 872 1309 258 31 42 chr17 37745316 37745736 -57526915 + RLTR22_Mur LTR ERVK 1040 1672 -176 3 872 23 78 0 0 chr17 37745774 37745825 -57526826 + AT_rich Low_complexity Low_complexity 1 51 0 3 872 478 210 26 88 chr17 37745954 37746147 -57526504 - RMER17C LTR ERVK -138 272 92 3 872 26 0 0 0 chr17 37746165 37746191 -57526460 + AT_rich Low_complexity Low_complexity 1 26 0 3 872 348 24 0 0 chr17 37746447 37746488 -57526163 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 872 219 36 0 0 chr17 37746488 37746515 -57526136 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 872 25 31 0 0 chr17 37746544 37746576 -57526075 + AT_rich Low_complexity Low_complexity 1 32 0 3 872 21 36 0 0 chr17 37747773 37747801 -57524850 + AT_rich Low_complexity Low_complexity 1 28 0 3 873 27 29 0 0 chr17 37749277 37749311 -57523340 + AT_rich Low_complexity Low_complexity 1 34 0 3 873 21 0 0 0 chr17 37749356 37749377 -57523274 + AT_rich Low_complexity Low_complexity 1 21 0 3 873 180 0 0 0 chr17 37749790 37749810 -57522841 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 3 873 227 355 11 0 chr17 37750232 37750325 -57522326 - MER5A DNA MER1_type 0 189 96 3 873 16361 113 11 14 chr17 37750652 37753951 -57518700 + L1_Mus2 LINE L1 3282 6566 0 3 873 1631 286 52 2 chr17 37754307 37754847 -57517804 + L1_Mur3 LINE L1 538 1104 -6624 3 873 1624 194 49 3 chr17 37754826 37755193 -57517458 + L1_Mur3 LINE L1 3944 4327 -1553 3 873 814 202 68 82 chr17 37755196 37755563 -57517088 - Lx7 LINE L1 -27 7669 7308 3 873 2653 216 63 19 chr17 37755577 37755859 -57516792 - Lx5 LINE L1 0 7050 6759 3 873 4219 140 58 19 chr17 37755859 37756638 -57516013 - RMER17D2 LTR ERVK 0 809 1 3 873 2653 216 63 19 chr17 37756638 37756946 -57515705 - Lx5 LINE L1 -292 6758 6434 3 873 2646 251 78 43 chr17 37756999 37757751 -57514900 - Lx7 LINE L1 -456 7240 6462 3 873 2416 231 40 13 chr17 37757757 37758565 -57514086 - Lx7 LINE L1 -1401 6295 5453 3 873 283 335 102 0 chr17 37758605 37758772 -57513879 - MER44B DNA MER2_type -136 414 231 3 873 3610 210 34 21 chr17 37759136 37759960 -57512691 + RLTR22_Mur LTR ERVK 984 1671 -177 3 873 537 16 0 0 chr17 37760322 37760384 -57512267 + (TG)n Simple_repeat Simple_repeat 2 63 0 3 873 235 156 50 38 chr17 37761688 37761768 -57510883 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 3 873 23 0 0 0 chr17 37763591 37763614 -57509037 + AT_rich Low_complexity Low_complexity 1 23 0 3 873 284 221 33 44 chr17 37764904 37764994 -57507657 + RLTR43A LTR ERVK 208 296 -68 3 873 7391 76 5 3 chr17 37765004 37765978 -57506673 - L1_Mus1 LINE L1 -2 6565 5590 3 873 268 203 74 86 chr17 37766405 37766486 -57506165 + ETnERV2-int LTR ERVK 190 269 -7948 3 873 244 240 13 0 chr17 37766535 37766610 -57506041 + A-rich Low_complexity Low_complexity 1 76 0 3 873 2239 159 149 39 chr17 37766830 37767339 -57505312 + ETnERV2-int LTR ERVK 255 819 -4587 3 873 4693 191 34 39 chr17 37767348 37767863 -57504788 + ETnERV2-int LTR ERVK 1728 2244 -5162 3 873 2924 12 0 0 chr17 37767863 37768189 -57504462 + IAPLTR3 LTR ERVK 1 326 0 3 873 4693 191 34 39 chr17 37768189 37768579 -57504072 + ETnERV2-int LTR ERVK 2245 2613 -4793 3 873 387 0 0 0 chr17 37768579 37768622 -57504029 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 873 4693 191 34 39 chr17 37768622 37768739 -57503912 + ETnERV2-int LTR ERVK 2614 2746 -4660 3 873 2580 178 20 20 chr17 37768740 37769329 -57503322 + ETnERV2-int LTR ERVK 2326 2839 -2567 3 873 2262 253 35 14 chr17 37769351 37770059 -57502592 + ETnERV2-int LTR ERVK 4084 4534 -2872 3 873 3355 200 12 10 chr17 37770113 37770785 -57501866 + ETnERV2-int LTR ERVK 5122 5794 -1612 3 873 1000 177 5 57 chr17 37770833 37771025 -57501626 + RMER16-int LTR ERVK 3795 3976 -1430 3 873 474 289 0 0 chr17 37771940 37772061 -57500590 + ETnERV2-int LTR ERVK 6489 6609 -310 3 873 2782 28 6 3 chr17 37772150 37772476 -57500175 + IAPLTR2b LTR ERVK 1 327 0 3 873 909 146 94 0 chr17 37772477 37772648 -57500003 + IAPEz-int LTR ERVK 9 195 -6286 3 873 225 255 20 0 chr17 37772648 37772699 -57499952 + RLTR27 LTR ERVK 223 274 -35 3 873 274 264 0 0 chr17 37772726 37772779 -57499872 + RLTR27 LTR ERVK 223 275 -34 3 873 4717 79 88 55 chr17 37772779 37773649 -57499002 + IAPEz-int LTR ERVK 168 989 -5492 3 873 391 105 0 0 chr17 37773655 37773712 -57498939 + B1_Mus1 SINE Alu 1 57 -91 3 873 270 261 0 74 chr17 37773712 37773744 -57498907 + B4 SINE B4 92 167 -125 3 873 1682 71 5 0 chr17 37773744 37773956 -57498695 + IAPEY3-int LTR ERVK 2285 2497 -5183 3 873 13990 74 9 5 chr17 37773955 37775772 -57496879 + IAPEz-int LTR ERVK 4656 6479 -2 3 873 2685 43 6 3 chr17 37775778 37776101 -57496550 + IAPLTR2b LTR ERVK 4 327 0 3 873 1945 227 42 5 chr17 37776275 37776700 -57495951 + ETnERV2-int LTR ERVK 6644 7084 -322 3 873 468 259 37 37 chr17 37776869 37777033 -57495618 + RLTR43A LTR ERVK 201 364 0 3 873 610 241 82 34 chr17 37777373 37777579 -57495072 - B3 SINE B2 0 216 1 3 873 390 21 0 0 chr17 37777656 37777703 -57494948 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 3 873 26 111 0 0 chr17 37777801 37777918 -57494733 + AT_rich Low_complexity Low_complexity 1 117 0 3 873 7623 48 5 2 chr17 37777976 37779483 -57493168 - L1Md_F2 LINE L1 0 6582 5073 3 873 6476 81 1 1 chr17 37779482 37780392 -57492259 + L1_Mm LINE L1 4229 5138 -745 3 873 257 290 0 31 chr17 37781396 37781492 -57491159 + L1VL2 LINE L1 101 193 -6142 3 873 17091 133 10 23 chr17 37781493 37785068 -57487583 + L1Md_F LINE L1 146 4105 -1778 3 873 819 309 24 8 chr17 37785071 37785322 -57487329 + MTD LTR MaLR 97 351 -68 3 873 2432 210 83 21 chr17 37785336 37785973 -57486678 - RMER6D LTR ERVK -11 709 1 3 873 11322 81 0 10 chr17 37786164 37788740 -57483911 + L1Md_F2 LINE L1 390 2940 -2943 3 873 1190 90 6 0 chr17 37788736 37788903 -57483748 + L1Md_F2 LINE L1 5418 5585 -298 3 873 7826 57 9 1 chr17 37788904 37789892 -57482759 + L1Md_F2 LINE L1 5587 6582 0 3 873 947 224 91 16 chr17 37790060 37790445 -57482206 + L1_Mur3 LINE L1 2994 3407 -2473 3 873 6915 81 5 8 chr17 37790458 37790709 -57481942 + L1_Mus2 LINE L1 5588 5840 -726 3 873 3586 35 28 5 chr17 37790709 37791135 -57481516 + RLTR10C LTR ERVK 1 436 0 3 873 6915 81 5 8 chr17 37791135 37791863 -57480788 + L1_Mus2 LINE L1 5841 6564 -2 3 873 1484 28 0 0 chr17 37791883 37792061 -57480590 + L1Md_T LINE L1 5408 5585 -298 3 873 8429 32 2 0 chr17 37792062 37793056 -57479595 + L1Md_T LINE L1 5587 6582 0 3 873 821 278 62 7 chr17 37793124 37793312 -57479339 + L1_Mur3 LINE L1 3322 3519 -2627 3 873 513 0 0 0 chr17 37793312 37793369 -57479282 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 873 821 271 62 5 chr17 37793369 37793559 -57479092 + L1_Mur3 LINE L1 3486 3715 -2431 3 873 919 190 5 24 chr17 37793538 37793748 -57478903 - L1_Mur3 LINE L1 -1928 3952 3747 3 873 968 79 21 0 chr17 37793891 37794031 -57478620 - L1_Mus3 LINE L1 -171 6467 6325 3 873 342 0 0 0 chr17 37794035 37794073 -57478578 + (T)n Simple_repeat Simple_repeat 1 38 0 3 873 251 180 0 0 chr17 37794073 37794123 -57478528 - L1_Mus3 LINE L1 -314 6324 6275 3 873 683 45 0 0 chr17 37794120 37794208 -57478443 + L1_Mus3 LINE L1 6129 6216 -422 3 873 575 151 37 60 chr17 37794208 37794342 -57478309 - ORR1A2-int LTR MaLR -1832 131 1 3 873 676 120 0 0 chr17 37794346 37794446 -57478205 - ORR1A2 LTR MaLR -8 318 219 3 873 2334 118 9 3 chr17 37794443 37794792 -57477859 - ORR1A2-int LTR MaLR -573 1390 1040 3 873 943 113 32 43 chr17 37794807 37794992 -57477659 - L1_Mus3 LINE L1 0 6638 6456 3 873 1410 98 0 89 chr17 37794993 37795218 -57477433 - ORR1A2 LTR MaLR -122 205 1 3 873 513 106 0 21 chr17 37795443 37795564 -57477087 + L1Md_F2 LINE L1 6487 6582 0 3 873 518 189 11 49 chr17 37797410 37797868 -57474783 + GA-rich Low_complexity Low_complexity 1 440 0 3 873 590 104 10 0 chr17 37797874 37797970 -57474681 + (GA)n Simple_repeat Simple_repeat 1 97 0 3 873 955 193 128 0 chr17 37798029 37798325 -57474326 + Lx9 LINE L1 7309 7642 -2 3 873 28 29 0 0 chr17 37799860 37799895 -57472756 + AT_rich Low_complexity Low_complexity 1 35 0 3 873 1331 271 52 5 chr17 37801868 37802268 -57470383 + MTD LTR MaLR 1 419 0 3 873 287 105 0 17 chr17 37802350 37802408 -57470243 + (CAAAA)n Simple_repeat Simple_repeat 2 58 0 3 873 301 297 18 9 chr17 37802917 37803029 -57469622 + L1M4 LINE L1 3389 3501 -2645 3 873 964 124 0 0 chr17 37803336 37803473 -57469178 + B1_Mus2 SINE Alu 1 137 -10 3 873 235 0 0 54 chr17 37803473 37803510 -57469141 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 3 873 296 64 21 0 chr17 37803950 37803997 -57468654 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 873 4224 23 12 0 chr17 37804620 37805104 -57467547 + MT2_Mm LTR ERVL 1 490 -3 3 873 3352 3 0 0 chr17 37807431 37807803 -57464848 + L1Md_A LINE L1 6211 6582 0 3 873 281 371 0 0 chr17 37807924 37808029 -57464622 + PB1D10 SINE Alu 1 105 -12 3 873 276 338 74 12 chr17 37808634 37808715 -57463936 - PB1D7 SINE Alu -39 81 11 3 873 21 57 0 0 chr17 37810295 37810330 -57462321 + AT_rich Low_complexity Low_complexity 1 35 0 3 873 24 53 0 0 chr17 37810431 37810469 -57462182 + AT_rich Low_complexity Low_complexity 1 38 0 3 873 5607 191 21 5 chr17 37810518 37811483 -57461168 - Lx4A LINE L1 -3 7055 6081 3 873 501 17 0 0 chr17 37811483 37811541 -57461110 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 873 5607 191 21 5 chr17 37811541 37811667 -57460984 - Lx4A LINE L1 -978 6080 5948 3 873 1772 216 26 52 chr17 37811668 37812127 -57460524 - L1_Mur2 LINE L1 -6122 590 144 3 873 1199 112 22 6 chr17 37812426 37812606 -57460045 - B2_Mm2 SINE B2 -11 184 2 3 873 1360 264 84 58 chr17 37812914 37813427 -57459224 + L1_Mur3 LINE L1 80 608 -7104 4 873 4115 124 129 35 chr17 37813427 37814239 -57458412 - RMER17D LTR ERVK 0 889 1 4 873 1360 264 84 58 chr17 37814239 37814341 -57458310 + L1_Mur3 LINE L1 609 711 -7001 4 873 2190 209 34 2 chr17 37814339 37814837 -57457814 - Lx4A LINE L1 -81 5796 5283 3 873 21379 92 6 4 chr17 37814832 37818743 -57453908 - L1Md_F2 LINE L1 -2 6580 2663 4 873 4338 156 7 1 chr17 37818735 37819506 -57453145 - L1Md_F2 LINE L1 -5630 986 212 4 873 2747 213 26 57 chr17 37819504 37820316 -57452335 - Lx4A LINE L1 -578 5299 4513 3 873 31227 83 3 16 chr17 37820311 37826380 -57446271 - L1Md_F2 LINE L1 -5 6577 590 4 873 5415 202 73 12 chr17 37826379 37827339 -57445312 - Lx4A LINE L1 -1348 4529 3477 3 873 306 0 0 0 chr17 37827339 37827373 -57445278 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 4 873 5415 202 73 12 chr17 37827373 37827853 -57444798 - Lx4A LINE L1 -2401 3476 3001 3 873 3097 195 42 3 chr17 37827848 37828769 -57443882 - Lx4A LINE L1 -3920 1957 984 3 873 818 237 52 28 chr17 37829581 37829794 -57442857 + URR1A DNA MER1_type 6 223 -3 4 873 268 315 0 0 chr17 37829797 37829905 -57442746 - L1_Rod LINE L1 -648 5199 5092 4 873 1290 308 67 18 chr17 37829929 37830715 -57441936 + L1_Mur3 LINE L1 4240 5064 -816 4 873 2146 193 77 26 chr17 37830721 37831189 -57441462 + RLTR16 LTR ERVK 1 492 -13 4 873 734 224 14 0 chr17 37831329 37831472 -57441179 - B1_Mur3 SINE Alu 0 149 5 4 873 288 337 0 78 chr17 37831498 37831601 -57441050 - ID_B1 SINE B4 -53 171 77 4 873 1196 94 0 11 chr17 37831636 37831818 -57440833 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 4 873 26 30 0 0 chr17 37832682 37832715 -57439936 + AT_rich Low_complexity Low_complexity 1 33 0 4 873 21 0 0 0 chr17 37832809 37832830 -57439821 + AT_rich Low_complexity Low_complexity 1 21 0 4 873 21 0 0 0 chr17 37832839 37832860 -57439791 + AT_rich Low_complexity Low_complexity 1 21 0 4 873 1302 98 19 15 chr17 37833205 37833465 -57439186 + (TCTA)n Simple_repeat Simple_repeat 1 260 0 4 873 203 260 0 0 chr17 37834218 37834268 -57438383 + GA-rich Low_complexity Low_complexity 2 51 0 4 873 741 125 7 13 chr17 37835531 37835685 -57436966 + (GA)n Simple_repeat Simple_repeat 2 154 0 4 873 26 64 0 0 chr17 37835754 37835801 -57436850 + AT_rich Low_complexity Low_complexity 1 47 0 4 873 7105 97 5 0 chr17 37835804 37836808 -57435843 - L1_Mus2 LINE L1 -2 6564 5556 4 873 249 339 29 11 chr17 37836875 37836990 -57435661 - B1_Mur4 SINE Alu -7 110 1 4 873 216 0 0 0 chr17 37837066 37837090 -57435561 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 4 873 436 361 81 33 chr17 37837178 37837450 -57435201 + B4A SINE B4 4 288 -4 4 873 441 0 0 0 chr17 37837458 37837507 -57435144 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 873 24 53 0 0 chr17 37839077 37839115 -57433536 + AT_rich Low_complexity Low_complexity 1 38 0 4 873 5816 188 16 5 chr17 37839167 37840135 -57432516 - Lx4A LINE L1 -3 7055 6081 4 873 240 59 0 0 chr17 37840135 37840169 -57432482 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 873 5816 188 16 5 chr17 37840169 37840298 -57432353 - Lx4A LINE L1 -978 6080 5947 4 873 1839 222 26 52 chr17 37840298 37840758 -57431893 - Lx4A LINE L1 -6121 965 518 4 873 1214 128 16 5 chr17 37841012 37841201 -57431450 - B2_Mm2 SINE B2 -3 192 2 4 873 4247 234 64 40 chr17 37841499 37841685 -57430966 + L1_Mur3 LINE L1 84 295 -7433 4 873 4338 65 14 12 chr17 37841685 37842248 -57430403 - LTRIS2 LTR ERV1 0 564 1 4 873 4247 234 64 40 chr17 37842248 37842549 -57430102 + L1_Mur3 LINE L1 296 583 -7145 4 873 3882 141 34 77 chr17 37842549 37843392 -57429259 + RMER17D2 LTR ERVK 3 809 0 4 873 4247 211 54 28 chr17 37843392 37844298 -57428353 + L1_Mur3 LINE L1 584 1517 -4363 4 873 2316 246 14 40 chr17 37844287 37844859 -57427792 + Lx6 LINE L1 6028 6584 -876 4 873 320 224 45 0 chr17 37844859 37844926 -57427725 + MTC LTR MaLR 1 70 -351 4 873 899 133 7 7 chr17 37844931 37845075 -57427576 + Lx2 LINE L1 6278 6421 -576 4 873 262 119 0 0 chr17 37845079 37845121 -57427530 + URR1B DNA MER1_type 181 222 -3 4 873 292 318 0 0 chr17 37845125 37845232 -57427419 - L1_Rod LINE L1 -649 5198 5092 4 873 1542 302 60 22 chr17 37845230 37846012 -57426639 + L1_Mur3 LINE L1 4214 5025 -855 4 873 2300 193 49 10 chr17 37846044 37846530 -57426121 + RLTR16 LTR ERVK 1 505 0 4 873 711 217 14 20 chr17 37846631 37846777 -57425874 - B1_Mur3 SINE Alu 0 149 5 4 873 256 322 10 72 chr17 37846789 37846886 -57425765 - PB1D10 SINE Alu -23 94 4 4 873 441 0 0 0 chr17 37846933 37846982 -57425669 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 873 357 24 0 0 chr17 37846982 37847023 -57425628 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 873 41 48 0 0 chr17 37848013 37848075 -57424576 + AT_rich Low_complexity Low_complexity 1 62 0 4 873 609 112 31 25 chr17 37848402 37848561 -57424090 + (TCTA)n Simple_repeat Simple_repeat 1 160 0 4 873 531 0 0 0 chr17 37848561 37848620 -57424031 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 873 604 74 10 21 chr17 37848992 37849088 -57423563 + (TTTTC)n Simple_repeat Simple_repeat 5 99 0 4 873 341 87 0 0 chr17 37850912 37850958 -57421693 - ORR1A0 LTR MaLR -300 46 1 4 873 6857 75 8 8 chr17 37850958 37851872 -57420779 - L1_Mus1 LINE L1 -10 6557 5644 4 873 3114 108 4 4 chr17 37851871 37852325 -57420326 + L1_Mus1 LINE L1 5170 5623 -260 4 873 377 95 16 0 chr17 37852711 37852774 -57419877 + (GA)n Simple_repeat Simple_repeat 2 65 0 4 873 22 0 0 0 chr17 37853895 37853917 -57418734 + AT_rich Low_complexity Low_complexity 1 22 0 4 873 322 196 10 10 chr17 37853933 37854036 -57418615 + GA-rich Low_complexity Low_complexity 2 104 0 4 873 22 70 0 0 chr17 37854767 37854810 -57417841 + AT_rich Low_complexity Low_complexity 1 43 0 4 873 3733 148 25 49 chr17 37856217 37856987 -57415664 - RMER17A LTR ERVK 0 751 1 4 873 1192 280 58 8 chr17 37857022 37857421 -57415230 + MTD LTR MaLR 1 419 0 4 873 265 72 42 42 chr17 37857503 37857575 -57415076 + (CAAA)n Simple_repeat Simple_repeat 1 72 0 4 873 343 325 65 23 chr17 37857787 37858048 -57414603 - L1MC LINE L1 -3115 3031 2760 4 873 252 292 19 0 chr17 37858069 37858175 -57414476 + L1M4 LINE L1 3389 3496 -2650 4 873 321 89 0 0 chr17 37858915 37858960 -57413691 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 873 296 364 0 0 chr17 37861911 37862010 -57410641 + PB1D10 SINE Alu 1 99 -18 4 873 272 356 56 28 chr17 37862602 37862709 -57409942 - PB1D7 SINE Alu 0 120 11 4 873 207 0 0 0 chr17 37862831 37862854 -57409797 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4 873 28 29 0 0 chr17 37864296 37864331 -57408320 + AT_rich Low_complexity Low_complexity 1 35 0 4 873 22 56 0 0 chr17 37864430 37864466 -57408185 + AT_rich Low_complexity Low_complexity 1 36 0 4 873 5638 189 18 4 chr17 37864528 37865488 -57407163 - Lx4A LINE L1 -10 7048 6081 4 873 450 0 0 0 chr17 37865488 37865538 -57407113 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 873 5638 189 18 4 chr17 37865538 37865664 -57406987 - Lx4A LINE L1 -978 6080 5948 4 873 1737 238 31 52 chr17 37865665 37866122 -57406529 - Lx4A LINE L1 -6122 964 518 4 873 1166 141 16 0 chr17 37866398 37866582 -57406069 - B2_Mm2 SINE B2 -7 188 2 4 873 3483 241 78 35 chr17 37866897 37867947 -57404704 + L1_Mur3 LINE L1 104 1198 -6530 4 873 36048 33 3 7 chr17 37867956 37873097 -57399554 + L1Md_T LINE L1 473 5585 -298 4 873 8347 37 1 0 chr17 37873098 37874092 -57398559 + L1Md_T LINE L1 5587 6581 -1 4 873 1435 160 32 40 chr17 37874093 37874424 -57398227 + L1_Mur3 LINE L1 1178 1511 -4369 4 873 2235 250 16 47 chr17 37874419 37874930 -57397721 + Lx6 LINE L1 6028 6527 -933 4 873 2180 123 3 6 chr17 37874930 37875257 -57397394 - IAPLTR3 LTR ERVK 0 326 1 4 873 2235 250 16 47 chr17 37875257 37875320 -57397331 + Lx6 LINE L1 6528 6584 -876 4 873 342 194 45 0 chr17 37875320 37875387 -57397264 + MTC LTR MaLR 1 70 -351 4 873 841 150 130 6 chr17 37875387 37875548 -57397103 + Lx2 LINE L1 6273 6453 -544 4 873 333 324 19 0 chr17 37875531 37875636 -57397015 - Lx7 LINE L1 -1177 6296 6190 4 873 654 49 0 0 chr17 37875993 37876075 -57396576 + (TTTC)n Simple_repeat Simple_repeat 3 84 0 4 873 743 255 103 30 chr17 37876075 37876463 -57396188 - Lx7 LINE L1 -1793 5903 5463 4 873 207 0 0 0 chr17 37876463 37876486 -57396165 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 873 436 294 122 23 chr17 37876486 37876516 -57396135 - Lx7 LINE L1 -395 5488 5459 4 873 11144 207 60 18 chr17 37876616 37879427 -57393224 - Lx5 LINE L1 -608 6442 3482 4 873 311 0 0 25 chr17 37879427 37879467 -57393184 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 4 109 11144 207 64 22 chr17 37879467 37879945 -57392706 - Lx5 LINE L1 -2396 3481 3002 4 874 3122 209 44 16 chr17 37879935 37880881 -57391770 - Lx5 LINE L1 -3915 1962 910 4 874 403 278 104 31 chr17 37881676 37881710 -57390941 - CYRA11_Mm Unknown Y-chromosome -233 384 178 4 874 917 135 25 19 chr17 37881710 37881869 -57390782 + URR1A DNA MER1_type 60 219 -7 4 874 355 284 0 0 chr17 37881875 37881984 -57390667 - L1_Rod LINE L1 -647 5200 5092 4 874 1511 296 64 25 chr17 37881982 37882795 -57389856 + L1_Mur3 LINE L1 4214 5058 -822 4 874 2278 203 47 6 chr17 37882795 37883280 -57389371 + RLTR16 LTR ERVK 1 505 0 4 874 693 241 0 0 chr17 37883390 37883535 -57389116 - B1_Mur3 SINE Alu 0 149 5 4 874 236 273 121 0 chr17 37883571 37883637 -57389014 - PB1D7 SINE Alu -37 83 10 4 874 375 78 0 0 chr17 37883699 37883750 -57388901 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 874 660 48 0 0 chr17 37883751 37883835 -57388816 + (GA)n Simple_repeat Simple_repeat 2 85 0 4 874 22 0 0 0 chr17 37884718 37884740 -57387911 + AT_rich Low_complexity Low_complexity 1 22 0 4 874 25 51 0 0 chr17 37884920 37884959 -57387692 + AT_rich Low_complexity Low_complexity 1 39 0 4 874 26 74 0 0 chr17 37885054 37885108 -57387543 + AT_rich Low_complexity Low_complexity 1 54 0 4 874 628 74 50 29 chr17 37885459 37885598 -57387053 + (TCTA)n Simple_repeat Simple_repeat 3 144 0 4 874 525 16 0 0 chr17 37885611 37885673 -57386978 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 874 675 57 0 0 chr17 37886434 37886522 -57386129 + (GA)n Simple_repeat Simple_repeat 1 88 0 4 874 411 167 0 26 chr17 37887831 37887948 -57384703 + GA-rich Low_complexity Low_complexity 1 114 0 4 874 655 347 85 37 chr17 37888367 37888639 -57384012 + B4A SINE B4 4 288 -4 4 874 387 0 0 0 chr17 37888647 37888690 -57383961 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 874 25 31 0 0 chr17 37890257 37890289 -57382362 + AT_rich Low_complexity Low_complexity 1 32 0 4 874 5532 172 29 23 chr17 37890344 37891447 -57381204 - Lx4A LINE L1 -3 7055 5946 4 874 1928 220 35 53 chr17 37891448 37891903 -57380748 - Lx4A LINE L1 -6122 964 518 4 874 254 226 0 0 chr17 37891946 37891999 -57380652 + L1_Mur3 LINE L1 43 95 -7633 4 874 1352 91 16 0 chr17 37892185 37892371 -57380280 - B2_Mm2 SINE B2 -5 190 2 4 874 4420 221 61 30 chr17 37892668 37894049 -57378602 + L1_Mur3 LINE L1 84 1511 -4369 4 874 2210 238 29 23 chr17 37894090 37894606 -57378045 + Lx6 LINE L1 6066 6584 -876 4 874 319 206 48 0 chr17 37894606 37894669 -57377982 + MTC LTR MaLR 1 66 -355 5 874 943 125 0 96 chr17 37894673 37894747 -57377904 + Lx2 LINE L1 6273 6339 -658 5 874 2660 66 3 3 chr17 37894747 37895097 -57377554 + L1_Mus1 LINE L1 6218 6567 0 5 874 943 125 0 96 chr17 37895097 37895199 -57377452 + Lx2 LINE L1 6340 6432 -565 5 874 330 139 0 0 chr17 37895233 37895305 -57377346 + (A)n Simple_repeat Simple_repeat 1 72 0 5 874 722 293 81 17 chr17 37895734 37896147 -57376504 - Lx7 LINE L1 -1794 5902 5433 5 874 11613 199 64 7 chr17 37896254 37897890 -57374761 - Lx5 LINE L1 -608 6442 4723 5 874 429 20 0 0 chr17 37897890 37897940 -57374711 + (TTTTG)n Simple_repeat Simple_repeat 1 50 0 5 874 11613 195 73 7 chr17 37897940 37899055 -57373596 - Lx5 LINE L1 -1155 4722 3479 5 874 188 34 0 33 chr17 37899055 37899085 -57373566 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 5 874 11613 195 73 7 chr17 37899085 37899565 -57373086 - Lx5 LINE L1 -2399 3478 3003 5 874 3137 213 28 12 chr17 37899567 37900518 -57372133 - Lx5 LINE L1 -3927 1950 905 5 874 2852 59 51 0 chr17 37900955 37901326 -57371325 + RLTR10 LTR ERVK 1 390 0 5 874 940 157 119 15 chr17 37901705 37901906 -57370745 + URR1A DNA MER1_type 2 223 -3 5 874 1311 289 53 69 chr17 37902011 37902882 -57369769 + L1_Mur3 LINE L1 4214 5070 -810 5 874 2039 201 81 11 chr17 37902882 37903261 -57369390 + RLTR16 LTR ERVK 1 401 -104 5 874 459 0 0 0 chr17 37903261 37903312 -57369339 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 874 2039 201 81 11 chr17 37903312 37903404 -57369247 + RLTR16 LTR ERVK 402 504 -1 5 874 210 71 0 0 chr17 37903499 37903527 -57369124 + (T)n Simple_repeat Simple_repeat 1 28 0 5 874 651 236 7 7 chr17 37903529 37903674 -57368977 - B1_Mur3 SINE Alu 0 149 5 5 874 265 288 76 0 chr17 37903710 37903776 -57368875 - PB1D10 SINE Alu -37 80 10 5 874 567 0 0 0 chr17 37903850 37903913 -57368738 + (GA)n Simple_repeat Simple_repeat 2 64 0 5 874 228 283 50 0 chr17 37904170 37904230 -57368421 - MLT1J LTR MaLR -343 169 107 5 874 24 0 0 0 chr17 37904402 37904426 -57368225 + AT_rich Low_complexity Low_complexity 1 24 0 5 874 22 0 0 0 chr17 37904695 37904717 -57367934 + AT_rich Low_complexity Low_complexity 1 22 0 5 874 24 32 0 0 chr17 37904747 37904778 -57367873 + AT_rich Low_complexity Low_complexity 1 31 0 5 874 25 75 0 0 chr17 37904872 37904925 -57367726 + AT_rich Low_complexity Low_complexity 1 53 0 5 874 510 123 19 19 chr17 37905273 37905381 -57367270 + (TCTA)n Simple_repeat Simple_repeat 2 109 0 5 874 207 0 0 0 chr17 37905405 37905428 -57367223 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 874 210 37 0 0 chr17 37906188 37906215 -57366436 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 5 874 275 171 13 0 chr17 37907538 37907614 -57365037 + (CAGAGA)n Simple_repeat Simple_repeat 2 78 0 5 874 828 124 11 6 chr17 37907598 37907777 -57364874 + (GA)n Simple_repeat Simple_repeat 1 180 0 5 874 609 374 69 15 chr17 37908199 37908473 -57364178 + B4A SINE B4 4 292 0 5 874 468 35 0 0 chr17 37910589 37910647 -57362004 + (CA)n Simple_repeat Simple_repeat 2 59 0 5 874 3869 82 0 0 chr17 37910810 37911323 -57361328 - L1_Mus3 LINE L1 -294 6344 5832 5 874 1871 74 66 14 chr17 37911323 37911611 -57361040 + L1_Mus3 LINE L1 6331 6633 -5 5 874 769 289 50 102 chr17 37911637 37912440 -57360211 + L1MC4a LINE L1 6901 7661 -221 5 874 29 0 0 0 chr17 37912630 37912659 -57359992 + AT_rich Low_complexity Low_complexity 1 29 0 5 874 961 226 43 14 chr17 37913515 37913722 -57358929 - B3 SINE B2 -3 213 1 5 874 440 62 16 0 chr17 37913849 37913913 -57358738 + (TTTA)n Simple_repeat Simple_repeat 2 66 0 5 874 3931 212 51 31 chr17 37913913 37914960 -57357691 - Lx5 LINE L1 -19 7039 6010 5 874 1328 256 93 13 chr17 37917136 37917675 -57354976 - L1_Mur3 LINE L1 -1313 4567 3986 5 874 227 313 30 0 chr17 37917673 37917740 -57354911 + Lx8 LINE L1 7185 7253 -220 5 874 1025 42 0 0 chr17 37917741 37917861 -57354790 + L1Md_F2 LINE L1 5466 5585 -298 5 874 7761 56 2 2 chr17 37917862 37918845 -57353806 + L1Md_F2 LINE L1 5587 6569 -13 5 874 353 278 16 23 chr17 37918862 37918991 -57353660 + Lx8 LINE L1 7245 7372 -101 5 874 3343 46 2 0 chr17 37919196 37919591 -57353060 + MTA_Mm LTR MaLR 1 396 0 5 874 18229 101 10 12 chr17 37919823 37923666 -57348985 + L1_Mus1 LINE L1 238 4066 -1817 5 874 6952 89 23 5 chr17 37923666 37924999 -57347652 + L1_Mus1 LINE L1 5216 6566 -1 5 874 4679 113 29 67 chr17 37925309 37926117 -57346534 - Lx3B LINE L1 0 6973 6197 5 874 360 0 0 0 chr17 37926220 37926260 -57346391 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 874 1637 224 67 28 chr17 37926260 37926778 -57345873 - RMER20B LTR ERVK -30 597 3 5 874 1688 209 23 1 chr17 37926779 37927123 -57345528 + RMER1B Other Other 438 875 -191 5 874 2600 143 39 10 chr17 37927123 37927539 -57345112 + RMER19A LTR ERVK 1 428 -309 5 874 368 64 0 0 chr17 37927554 37927601 -57345050 - L1_Mus3 LINE L1 -277 6359 6313 5 874 1547 137 21 11 chr17 37927601 37927972 -57344679 + L1_Mus3 LINE L1 6350 6638 0 5 874 682 246 0 0 chr17 37927974 37928096 -57344555 - B3 SINE B2 -93 123 2 5 874 661 265 72 14 chr17 37928310 37928517 -57344134 - Lx8 LINE L1 -1037 6436 6218 5 874 1191 55 0 0 chr17 37929290 37929436 -57343215 + B1_Mus2 SINE Alu 2 147 0 5 874 319 273 98 11 chr17 37929440 37929614 -57343037 + L1M5 LINE L1 5315 5503 -670 5 874 22 70 0 0 chr17 37930058 37930101 -57342550 + AT_rich Low_complexity Low_complexity 1 43 0 5 874 748 199 44 33 chr17 37934082 37934264 -57338387 + B2_Mm2 SINE B2 3 186 -9 5 874 268 118 279 0 chr17 37934302 37934370 -57338281 - Lx9 LINE L1 -1 7643 7557 5 874 1588 163 88 42 chr17 37934375 37934682 -57337969 + ORR1A4 LTR MaLR 1 321 -8 5 874 7489 79 6 11 chr17 37935474 37936493 -57336158 + L1_Mus3 LINE L1 5619 6632 -6 5 874 24 0 0 0 chr17 37937183 37937207 -57335444 + AT_rich Low_complexity Low_complexity 1 24 0 5 874 211 198 45 36 chr17 37938401 37938511 -57334140 + (TTATA)n Simple_repeat Simple_repeat 2 112 0 5 874 237 217 42 34 chr17 37938663 37938782 -57333869 + (TATATG)n Simple_repeat Simple_repeat 3 122 0 5 874 309 180 27 61 chr17 37938724 37938872 -57333779 + (TTATA)n Simple_repeat Simple_repeat 3 145 0 5 874 28 29 0 0 chr17 37938879 37938914 -57333737 + AT_rich Low_complexity Low_complexity 1 35 0 5 874 300 243 9 36 chr17 37940203 37940314 -57332337 + (TA)n Simple_repeat Simple_repeat 1 108 0 5 874 227 342 0 105 chr17 37940912 37941036 -57331615 - PB1D7 SINE Alu -5 115 5 5 874 314 241 28 199 chr17 37940960 37941141 -57331510 - ID_B1 SINE B4 -73 151 2 5 874 22 0 0 0 chr17 37943386 37943408 -57329243 + AT_rich Low_complexity Low_complexity 1 22 0 5 874 30 59 0 0 chr17 37943654 37943705 -57328946 + AT_rich Low_complexity Low_complexity 1 51 0 5 874 1194 115 16 0 chr17 37944571 37944754 -57327897 - B2_Mm2 SINE B2 -3 192 7 5 874 22 35 0 0 chr17 37945742 37945771 -57326880 + AT_rich Low_complexity Low_complexity 1 29 0 5 874 257 220 0 0 chr17 37946697 37946747 -57325904 - RLTR19-int LTR ERVK -2168 3969 3920 5 874 34 42 0 0 chr17 37946801 37946849 -57325802 + AT_rich Low_complexity Low_complexity 1 48 0 5 874 1103 62 0 0 chr17 37946857 37947002 -57325649 + L1_Mm LINE L1 4718 4862 -1021 5 874 527 190 0 20 chr17 37947221 37947323 -57325328 + LSU-rRNA_Hsa rRNA rRNA 4203 4302 -733 5 874 526 190 69 114 chr17 37947330 37947421 -57325230 - RLTR19-int LTR ERVK -2419 3718 3628 5 874 975 63 0 0 chr17 37947421 37947548 -57325103 + (TAGA)n Simple_repeat Simple_repeat 4 130 0 5 874 526 190 69 114 chr17 37947548 37947658 -57324993 - RLTR19-int LTR ERVK -2510 3627 3526 5 874 1169 98 29 6 chr17 37947688 37947862 -57324789 - B2_Mm1t SINE B2 -14 179 2 5 874 33885 35 0 0 chr17 37948088 37953618 -57319033 + L1Md_T LINE L1 1 5589 -297 5 874 8951 8 0 3 chr17 37953618 37954617 -57318034 + L1Md_T LINE L1 5590 6585 0 5 874 23 0 0 0 chr17 37954695 37954718 -57317933 + AT_rich Low_complexity Low_complexity 1 23 0 5 874 408 250 0 10 chr17 37954970 37955071 -57317580 - MYSERV6-int LTR ERVK -276 8683 8584 5 874 3288 242 77 45 chr17 37955092 37956071 -57316580 + RMER1B Other Other 41 1050 -16 5 874 949 230 67 86 chr17 37956079 37956880 -57315771 - MYSERV6-int LTR ERVK -357 8602 8000 5 874 477 0 0 0 chr17 37956900 37956953 -57315698 + (TGG)n Simple_repeat Simple_repeat 2 54 0 5 874 10245 87 21 7 chr17 37957995 37960183 -57312468 - L1VL2 LINE L1 -1107 2508 283 5 874 310 254 14 0 chr17 37960283 37960354 -57312297 - MYSERV6-int LTR ERVK -3762 1760 1689 5 874 405 0 0 0 chr17 37960421 37960466 -57312185 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 5 874 289 279 0 12 chr17 37961381 37961461 -57311190 - RodERV21-int LTR ERV1 -4143 848 770 5 874 372 227 247 26 chr17 37961939 37962093 -57310558 - RodERV21-int LTR ERV1 -4787 204 17 5 874 232 237 0 0 chr17 37962247 37962306 -57310345 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 5 874 5421 129 10 41 chr17 37963258 37965064 -57307587 + L1VL4 LINE L1 18 1768 -1791 5 874 2207 106 6 0 chr17 37965062 37965410 -57307241 - L1_Mus3 LINE L1 -392 5491 5142 5 874 6301 101 72 1 chr17 37965409 37966459 -57306192 + L1_Mus3 LINE L1 5510 6633 -5 5 874 10633 167 18 60 chr17 37966460 37968829 -57303822 + L1_Mur1 LINE L1 2115 4382 -1504 5 874 1560 102 0 0 chr17 37968842 37969078 -57303573 - L1_Mm LINE L1 -1544 4339 4104 5 874 1067 276 57 13 chr17 37969127 37969442 -57303209 - ORR1E LTR MaLR -17 342 14 5 874 996 55 0 0 chr17 37971128 37971255 -57301396 + (TAGA)n Simple_repeat Simple_repeat 2 128 0 5 874 921 44 0 0 chr17 37971288 37971402 -57301249 + (GA)n Simple_repeat Simple_repeat 1 114 0 5 874 441 0 0 0 chr17 37974553 37974602 -57298049 + (TC)n Simple_repeat Simple_repeat 2 50 0 5 874 459 0 0 0 chr17 37974602 37974652 -57297999 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 874 189 0 0 0 chr17 37974906 37974927 -57297724 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 874 503 285 101 16 chr17 37975824 37976013 -57296638 - Lx8 LINE L1 -298 7175 6971 5 874 929 246 35 0 chr17 37976159 37976358 -57296293 - MTD LTR MaLR -14 405 200 5 874 588 143 0 0 chr17 37976361 37976459 -57296192 + (TTTC)n Simple_repeat Simple_repeat 2 99 0 5 874 234 0 0 0 chr17 37977976 37978002 -57294649 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 5 874 234 143 0 0 chr17 37979874 37979916 -57292735 + L1M2 LINE L1 3780 3821 -2322 5 874 186 43 0 0 chr17 37979916 37979939 -57292712 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 874 357 24 0 0 chr17 37979939 37979981 -57292670 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 5 874 12547 112 42 14 chr17 37979992 37982673 -57289978 + L1_Mus2 LINE L1 3810 6565 -1 5 874 1095 211 9 5 chr17 37983100 37983310 -57289341 - MTD LTR MaLR -208 211 1 5 874 26 30 0 0 chr17 37983443 37983476 -57289175 + AT_rich Low_complexity Low_complexity 1 33 0 6 874 415 347 81 17 chr17 37983590 37983998 -57288653 - L1MD2 LINE L1 -239 6120 5687 6 874 266 372 57 19 chr17 37984073 37984232 -57288419 - MLT1J2 LTR MaLR -269 179 15 6 874 240 88 35 17 chr17 37985771 37985829 -57286822 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 6 874 213 39 0 0 chr17 37986650 37986676 -57285975 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 6 874 279 198 57 57 chr17 37987313 37987490 -57285161 + (TTATA)n Simple_repeat Simple_repeat 4 180 0 6 874 182 91 30 0 chr17 37988653 37988686 -57283965 + (TTTC)n Simple_repeat Simple_repeat 2 35 0 6 874 973 144 0 14 chr17 37988690 37988838 -57283813 - B1_Mus1 SINE Alu -2 146 1 6 874 321 264 0 27 chr17 37989276 37989350 -57283301 + B1F2 SINE Alu 26 97 -52 6 874 377 272 19 28 chr17 37989353 37989459 -57283192 - RMER12 LTR ERVK -117 1205 1101 6 874 255 103 0 0 chr17 37989642 37989681 -57282970 + (ATG)n Simple_repeat Simple_repeat 1 39 0 6 874 1698 140 13 10 chr17 37989683 37989994 -57282657 - RLTR22_Mur LTR ERVK -1043 805 494 6 874 186 208 0 0 chr17 37990043 37990096 -57282555 + (CAGAGA)n Simple_repeat Simple_repeat 1 53 0 6 874 36891 6 0 0 chr17 37990464 37996033 -57276618 + L1Md_A LINE L1 18 5586 -297 6 874 9053 3 0 0 chr17 37996033 37997029 -57275622 + L1Md_A LINE L1 5587 6582 0 6 874 234 0 0 0 chr17 37998903 37998929 -57273722 + (A)n Simple_repeat Simple_repeat 1 26 0 6 874 1061 182 117 0 chr17 37999412 37999676 -57272975 + L1_Mur2 LINE L1 4509 4803 -1074 6 874 1506 200 19 12 chr17 37999676 38000000 -57272651 - RLTR15 LTR ERVK 0 359 34 6 874 859 182 16 5 chr17 38000029 38000217 -57272434 + Lx5 LINE L1 4794 4983 -894 1 874 2381 234 71 37 chr17 38000219 38000970 -57271681 + Lx5 LINE L1 5670 6445 -605 1 874 1032 220 28 21 chr17 38000971 38001274 -57271377 + ORR1A4 LTR MaLR 2 289 -57 2 874 7683 49 1 4 chr17 38001276 38002680 -57269971 - L1Md_F2 LINE L1 0 6582 5183 3 874 340 254 0 0 chr17 38002685 38002756 -57269895 + MT2B LTR ERVL 175 245 -356 4 874 3767 188 28 4 chr17 38002774 38003534 -57269117 + ORR1A4-int LTR MaLR 719 1496 -467 2 874 528 285 62 10 chr17 38003554 38003749 -57268902 - B3 SINE B2 -11 205 1 5 874 513 0 0 0 chr17 38003954 38004011 -57268640 + (GA)n Simple_repeat Simple_repeat 2 58 0 6 874 2265 119 11 9 chr17 38004290 38004637 -57268014 + RLTR9A2 LTR ERVK 36 383 0 7 874 225 354 22 128 chr17 38004637 38004860 -57267791 + RLTR33 LTR ERVK 432 630 -48 8 874 322 349 17 12 chr17 38005141 38005230 -57267421 - MurSatRep1 Unknown Unknown -88 2049 1971 9 874 301 281 21 21 chr17 38005230 38005372 -57267279 - MMSAT4 Satellite Satellite 0 168 27 1 874 322 349 17 12 chr17 38005372 38005513 -57267138 - MurSatRep1 Unknown Unknown -88 1970 1845 9 874 229 286 41 25 chr17 38005412 38005534 -57267117 - MMSAT4 Satellite Satellite -14 154 31 1 874 248 297 27 11 chr17 38005555 38005770 -57266881 - MMSAT4 Satellite Satellite -6 218 1 1 874 3070 165 9 47 chr17 38005802 38006468 -57266183 - MurSatRep1 Unknown Unknown -4 2133 1493 1 874 2414 211 109 19 chr17 38006468 38007057 -57265594 + RLTR26 LTR ERVK 1 642 0 1 874 6706 194 14 32 chr17 38007058 38008531 -57264120 - MurSatRep1 Unknown Unknown -640 1497 52 1 874 2362 156 52 7 chr17 38008531 38008951 -57263700 - BGLII_B LTR ERVK -2 439 1 1 874 6706 194 14 32 chr17 38008951 38008996 -57263655 - MurSatRep1 Unknown Unknown -2086 51 6 1 874 471 323 20 35 chr17 38009089 38009288 -57263363 + B3 SINE B2 2 197 -19 1 874 779 141 62 0 chr17 38009638 38009766 -57262885 + B1_Mus1 SINE Alu 4 139 -9 1 874 1188 102 47 26 chr17 38009875 38010066 -57262585 + B2_Mm2 SINE B2 1 195 0 1 874 388 320 72 42 chr17 38010273 38010458 -57262193 - B3A SINE B2 0 198 2 1 874 201 162 0 0 chr17 38010507 38010544 -57262107 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 1 875 2992 148 13 6 chr17 38011123 38011672 -57260979 + L1_Mur2 LINE L1 3976 4528 -1349 2 875 1763 207 26 55 chr17 38012296 38012750 -57259901 - BGLII_B LTR ERVK 0 441 1 2 875 1242 310 31 13 chr17 38013044 38013567 -57259084 + Lx6 LINE L1 5816 6347 -1113 2 875 3715 14 121 0 chr17 38013597 38014037 -57258614 - MT2_Mm LTR ERVL 0 493 1 2 875 302 0 0 0 chr17 38014037 38014075 -57258576 - MERVL-int LTR ERVL 0 5485 5448 2 875 390 167 46 35 chr17 38014075 38014162 -57258489 - ORR1A3-int LTR MaLR -1323 640 553 2 875 38725 16 14 0 chr17 38014162 38019449 -57253202 - MERVL-int LTR ERVL -125 5360 1 2 875 3715 14 121 0 chr17 38019449 38019889 -57252762 - MT2_Mm LTR ERVL 0 493 1 2 875 548 285 82 45 chr17 38020237 38020637 -57252014 - MYSERV16_I-int LTR ERVK -1890 436 22 2 875 510 316 97 43 chr17 38020649 38021135 -57251516 - MYSERV-int LTR ERVK -2265 4285 3774 2 875 707 160 0 0 chr17 38022208 38022327 -57250324 - Lx5 LINE L1 -455 6595 6477 2 875 1492 246 55 65 chr17 38022971 38023445 -57249206 - RMER20B LTR ERVK -158 469 1 2 875 2332 214 54 72 chr17 38023483 38024108 -57248543 - RLTR18 LTR ERVK -2 614 1 2 875 54 0 0 0 chr17 38024355 38024409 -57248242 + AT_rich Low_complexity Low_complexity 1 54 0 3 875 349 322 53 53 chr17 38024409 38024596 -57248055 + B3A SINE B2 4 190 -8 3 875 398 207 12 12 chr17 38024631 38024802 -57247849 + (TA)n Simple_repeat Simple_repeat 1 171 0 3 875 58 0 0 0 chr17 38024814 38024872 -57247779 + AT_rich Low_complexity Low_complexity 1 58 0 3 875 2825 288 48 14 chr17 38025683 38026295 -57246356 - Lx5 LINE L1 0 7050 6402 3 875 8186 24 0 3 chr17 38026295 38027227 -57245424 + RLTR13B3 LTR ERVK 1 929 0 3 875 2825 288 48 14 chr17 38027227 38027510 -57245141 - Lx5 LINE L1 -649 6401 6125 3 875 247 25 0 48 chr17 38027553 38027595 -57245056 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 3 875 791 125 0 0 chr17 38027595 38027704 -57244947 - B1_Mus1 SINE Alu -12 136 28 3 875 23 33 0 0 chr17 38027839 38027869 -57244782 + AT_rich Low_complexity Low_complexity 1 30 0 3 875 23670 86 3 5 chr17 38028308 38032439 -57240212 - L1Md_F2 LINE L1 -3 6579 2456 3 875 7076 47 2 5 chr17 38032436 38033370 -57239281 - L1Md_F3 LINE L1 -1 6583 5653 4 875 6209 83 5 10 chr17 38033356 38034325 -57238326 - L1Md_F2 LINE L1 -3446 2437 1474 3 875 1088 110 0 0 chr17 38034323 38034478 -57238173 - L1Md_F2 LINE L1 -6096 520 366 3 875 507 302 156 19 chr17 38035097 38035404 -57237247 - Lx8 LINE L1 -295 7178 6830 4 875 1568 269 19 67 chr17 38035434 38035663 -57236988 - MTD LTR MaLR -9 410 201 4 875 2887 86 5 0 chr17 38035663 38036058 -57236593 - L1_Mus1 LINE L1 0 6567 6171 4 875 1568 269 19 67 chr17 38036058 38036259 -57236392 - MTD LTR MaLR -219 200 1 4 875 374 315 96 29 chr17 38036608 38036984 -57235667 - L1MD2 LINE L1 -272 6087 5687 4 875 202 323 0 21 chr17 38037559 38037654 -57234997 + GA-rich Low_complexity Low_complexity 4 96 0 4 875 258 381 26 6 chr17 38038024 38038180 -57234471 + MER5A DNA MER1_type 31 189 0 4 875 22 0 0 0 chr17 38039335 38039357 -57233294 + AT_rich Low_complexity Low_complexity 1 22 0 4 875 231 61 0 0 chr17 38039626 38039659 -57232992 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 875 249 135 0 0 chr17 38039672 38039724 -57232927 + (T)n Simple_repeat Simple_repeat 1 52 0 4 875 27 87 0 0 chr17 38040397 38040466 -57232185 + AT_rich Low_complexity Low_complexity 1 69 0 5 875 951 85 78 0 chr17 38041533 38041662 -57230989 + B1_Mm SINE Alu 1 139 -8 5 875 337 183 0 32 chr17 38042253 38042315 -57230336 + B1F2 SINE Alu 38 97 -52 5 875 255 103 0 0 chr17 38042600 38042639 -57230012 + (ATG)n Simple_repeat Simple_repeat 2 40 0 5 875 1423 154 8 4 chr17 38042639 38042893 -57229758 - RLTR22_Mur LTR ERVK -1048 800 546 5 875 1255 132 34 38 chr17 38042981 38043218 -57229433 + RLTRETN_Mm LTR ERVK 87 322 0 5 875 2330 77 34 133 chr17 38043219 38043686 -57228965 + MMETn-int LTR ERVK 2 422 -4422 5 875 1991 92 12 73 chr17 38043686 38044026 -57228625 - RLTRETN_Mm LTR ERVK -3 319 1 5 875 1464 180 7 0 chr17 38045430 38045725 -57226926 + Lx5 LINE L1 4509 4805 -1072 5 875 258 266 0 0 chr17 38045728 38045792 -57226859 - RLTR15 LTR ERVK -5 354 291 5 875 626 273 0 0 chr17 38045899 38046049 -57226602 - RLTR15 LTR ERVK -209 150 1 5 875 1524 177 17 3 chr17 38046059 38046348 -57226303 - RLTR15 LTR ERVK -66 293 1 5 875 605 215 24 2 chr17 38046350 38046535 -57226116 + Lx5 LINE L1 4809 4994 -892 5 875 2321 256 49 24 chr17 38046536 38047297 -57225354 + Lx5 LINE L1 5670 6449 -601 5 875 1116 216 66 85 chr17 38047304 38047622 -57225029 + ORR1A4 LTR MaLR 10 321 -8 6 875 3375 211 34 125 chr17 38047626 38048769 -57223882 + ORR1A4-int LTR MaLR 1 1039 -924 6 875 2029 112 28 154 chr17 38048780 38049242 -57223409 - RLTR9F LTR ERVK -11 404 1 6 875 2230 176 34 59 chr17 38049242 38049714 -57222937 + ORR1A4-int LTR MaLR 1037 1496 -467 6 875 516 301 55 5 chr17 38049748 38049948 -57222703 - B3 SINE B2 -6 210 1 6 875 2391 78 0 4 chr17 38050073 38050432 -57222219 + L1Md_F3 LINE L1 5226 5586 -297 6 875 8308 32 5 0 chr17 38050433 38051422 -57221229 + L1Md_F3 LINE L1 5588 6581 -3 6 875 395 92 15 0 chr17 38051434 38051499 -57221152 + (CA)n Simple_repeat Simple_repeat 1 66 0 6 875 1289 252 36 12 chr17 38052058 38052391 -57220260 - Lx5 LINE L1 -59 6991 6651 6 875 1205 99 17 6 chr17 38052401 38052573 -57220078 - B2_Mm2 SINE B2 -20 175 2 6 875 1007 199 24 9 chr17 38052573 38052786 -57219865 - Lx4B LINE L1 -376 6682 6467 6 875 415 319 43 8 chr17 38052916 38053033 -57219618 - B3 SINE B2 -43 173 53 6 875 1398 46 0 0 chr17 38053205 38053380 -57219271 - L1Md_T LINE L1 0 6582 6408 6 875 489 340 0 0 chr17 38053490 38053631 -57219020 - B1_Mur3 SINE Alu -8 141 1 7 875 27 0 0 0 chr17 38053932 38053959 -57218692 + AT_rich Low_complexity Low_complexity 1 27 0 7 875 230 339 0 0 chr17 38054112 38054174 -57218477 - RSINE1 SINE B4 -99 66 5 7 875 814 131 0 0 chr17 38054247 38054369 -57218282 - B1_Mus1 SINE Alu 0 148 27 7 875 24 53 0 0 chr17 38054495 38054533 -57218118 + AT_rich Low_complexity Low_complexity 1 38 0 7 875 643 265 163 10 chr17 38055528 38055822 -57216829 - Lx8 LINE L1 -292 7181 6843 7 875 1817 256 20 2 chr17 38055865 38056268 -57216383 - MTD LTR MaLR -9 410 1 7 875 245 349 66 33 chr17 38057071 38057222 -57215429 - MLT1J2 LTR MaLR -269 179 24 7 875 578 14 14 0 chr17 38057441 38057512 -57215139 + (GA)n Simple_repeat Simple_repeat 1 72 0 7 875 182 37 0 36 chr17 38057635 38057663 -57214988 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 7 875 228 376 33 13 chr17 38058058 38058209 -57214442 + MER5A DNA MER1_type 36 189 0 8 875 181 0 69 0 chr17 38058362 38058391 -57214260 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 8 875 267 79 0 0 chr17 38058800 38058838 -57213813 + (A)n Simple_repeat Simple_repeat 1 38 0 8 875 198 246 0 0 chr17 38059638 38059699 -57212952 + (CA)n Simple_repeat Simple_repeat 2 62 0 8 875 248 53 26 0 chr17 38059728 38059766 -57212885 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 8 875 209 174 72 0 chr17 38060395 38060464 -57212187 + (TA)n Simple_repeat Simple_repeat 2 75 0 8 875 37 0 0 0 chr17 38061622 38061659 -57210992 + AT_rich Low_complexity Low_complexity 1 37 0 8 875 1007 130 0 0 chr17 38061661 38061799 -57210852 - B1_Mus1 SINE Alu -7 141 4 8 875 413 187 0 30 chr17 38062256 38062349 -57210302 + B1F2 SINE Alu 26 114 -6 8 875 331 301 19 28 chr17 38062333 38062439 -57210212 - RMER12 LTR ERVK -117 1205 1101 8 875 234 176 0 0 chr17 38062615 38062666 -57209985 + (ATG)n Simple_repeat Simple_repeat 3 53 0 9 875 1675 135 10 13 chr17 38062668 38062975 -57209676 - RLTR22_Mur LTR ERVK -1049 799 494 9 875 183 100 0 0 chr17 38063060 38063090 -57209561 + (CAGA)n Simple_repeat Simple_repeat 1 30 0 9 875 183 114 0 0 chr17 38063772 38063807 -57208844 + (CAAAAA)n Simple_repeat Simple_repeat 6 40 0 9 875 23 54 0 0 chr17 38063865 38063902 -57208749 + AT_rich Low_complexity Low_complexity 1 37 0 9 875 1783 186 9 120 chr17 38064555 38064905 -57207746 + Lx5 LINE L1 4509 4803 -1074 9 875 1707 189 11 6 chr17 38064905 38065262 -57207389 - RLTR15 LTR ERVK 0 359 1 9 875 1783 186 9 120 chr17 38065262 38065444 -57207207 + Lx5 LINE L1 4804 4982 -895 9 875 2255 234 62 51 chr17 38065434 38066212 -57206439 + Lx5 LINE L1 5656 6441 -609 9 875 1336 203 18 111 chr17 38066223 38066566 -57206085 + ORR1A4 LTR MaLR 10 320 -9 9 875 2607 206 44 138 chr17 38066573 38066954 -57205697 + ORR1A4-int LTR MaLR 3 342 -1621 9 875 956 124 0 35 chr17 38066954 38067096 -57205555 - B1_Mus1 SINE Alu -10 138 2 9 875 2607 206 44 138 chr17 38067096 38067548 -57205103 + ORR1A4-int LTR MaLR 343 758 -1205 9 875 1045 239 64 64 chr17 38067375 38067657 -57204994 + MT2B LTR ERVL 6 287 -314 9 875 3547 176 64 9 chr17 38067616 38068355 -57204296 + ORR1A4-int LTR MaLR 718 1496 -467 9 875 621 253 105 5 chr17 38068388 38068579 -57204072 - B3 SINE B2 -6 210 1 1 875 438 185 0 32 chr17 38069614 38069737 -57202914 + GA-rich Low_complexity Low_complexity 1 119 0 1 875 232 286 27 41 chr17 38069737 38069810 -57202841 - tRNA-Ala-GCY_ tRNA tRNA -1 74 3 1 875 286 309 0 0 chr17 38069748 38069816 -57202835 - ID4 SINE ID -13 70 3 1 875 225 321 24 12 chr17 38069826 38069911 -57202740 - B1F SINE Alu -2 147 62 1 875 2398 224 44 7 chr17 38070377 38070920 -57201731 - Lx5 LINE L1 -43 7007 6445 1 875 423 328 25 40 chr17 38071032 38071182 -57201469 - B3 SINE B2 -36 180 30 1 875 1078 65 0 7 chr17 38071363 38071503 -57201148 - B1_Mm SINE Alu 0 147 9 1 875 1378 70 43 0 chr17 38071619 38071804 -57200847 - B2_Mm2 SINE B2 -2 193 1 1 875 462 333 0 0 chr17 38071829 38071970 -57200681 - B1_Mur3 SINE Alu -8 141 1 1 875 543 31 0 0 chr17 38072183 38072248 -57200403 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 875 301 333 103 34 chr17 38072407 38072553 -57200098 - RSINE1 SINE B4 -5 160 5 1 875 201 162 0 0 chr17 38072857 38072894 -57199757 + T-rich Low_complexity Low_complexity 1 37 0 1 875 299 115 36 55 chr17 38073247 38073302 -57199349 - RLTR25B LTR ERVK -76 1027 974 1 875 3433 173 78 49 chr17 38073278 38073399 -57199252 - RLTR25B LTR ERVK -203 825 681 1 875 225 83 0 0 chr17 38073399 38073435 -57199216 + (CAA)n Simple_repeat Simple_repeat 1 36 0 1 875 3433 173 78 49 chr17 38073435 38074066 -57198585 - RLTR25B LTR ERVK -348 680 53 1 875 338 354 0 150 chr17 38074783 38074956 -57197695 + RLTR33 LTR ERVK 447 593 -85 1 875 275 304 45 8 chr17 38075205 38075409 -57197242 - MMSAT4 Satellite Satellite -22 211 1 1 875 10184 68 9 2 chr17 38075471 38077568 -57195083 - L1Md_F2 LINE L1 -1 6581 4471 1 875 3322 185 46 11 chr17 38077566 38077963 -57194688 - MurSatRep1 Unknown Unknown -1367 770 354 1 875 222 37 0 0 chr17 38077963 38077990 -57194661 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 875 428 0 19 0 chr17 38077990 38078041 -57194610 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 875 3322 185 46 11 chr17 38078041 38078336 -57194315 - MurSatRep1 Unknown Unknown -1784 353 54 1 875 1979 197 20 10 chr17 38078342 38078737 -57193914 - BGLII_B LTR ERVK -40 401 3 1 875 1151 90 6 6 chr17 38078989 38079156 -57193495 + B2_Mm2 SINE B2 2 168 -27 1 875 210 71 0 0 chr17 38079159 38079187 -57193464 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 1 875 820 141 7 0 chr17 38079832 38079967 -57192684 - Lx5 LINE L1 -438 6612 6477 1 875 1159 216 21 3 chr17 38080336 38080624 -57192027 - ORR1A4-int LTR MaLR -953 1010 718 1 875 1091 227 64 64 chr17 38080583 38080865 -57191786 - MT2B LTR ERVL -314 287 6 1 875 2786 203 48 68 chr17 38080706 38081461 -57191190 - ORR1A4-int LTR MaLR -1219 744 5 1 875 1281 185 17 132 chr17 38081470 38081609 -57191042 - ORR1A4 LTR MaLR -11 318 185 1 875 5696 89 9 8 chr17 38081609 38082414 -57190237 - RLTR13D1 LTR ERVK 0 806 1 1 875 1281 185 17 132 chr17 38082414 38082623 -57190028 - ORR1A4 LTR MaLR -145 184 10 1 875 2216 240 51 37 chr17 38082635 38082675 -57189976 - Lx5 LINE L1 -609 6441 6404 1 875 2867 6 3 0 chr17 38082675 38082996 -57189655 - RLTRETN_Mm LTR ERVK 0 322 1 1 875 2216 240 51 37 chr17 38082996 38083535 -57189116 - Lx5 LINE L1 -647 6403 5852 1 875 1525 155 118 0 chr17 38083535 38083832 -57188819 + IAPEY3_LTR LTR ERVK 1 332 0 1 875 2216 240 51 37 chr17 38083832 38083977 -57188674 - Lx5 LINE L1 -1199 5851 5706 1 875 201 162 0 0 chr17 38083979 38084016 -57188635 + T-rich Low_complexity Low_complexity 1 37 0 1 875 1535 188 11 106 chr17 38084838 38084972 -57187679 - Lx5 LINE L1 -943 4934 4804 1 875 1622 192 14 8 chr17 38084972 38085329 -57187322 + RLTR15 LTR ERVK 1 359 0 1 875 1535 188 11 106 chr17 38085329 38085665 -57186986 - Lx5 LINE L1 -1074 4803 4509 1 875 1174 82 0 0 chr17 38086264 38086410 -57186241 + B1_Mm SINE Alu 2 147 0 1 875 311 220 66 0 chr17 38087228 38087319 -57185332 - HAL1-3A_ME LINE L1 -786 2072 1976 1 875 639 105 14 27 chr17 38087320 38087467 -57185184 + (TCTCTG)n Simple_repeat Simple_repeat 4 148 0 1 875 1470 172 3 7 chr17 38087508 38087794 -57184857 + RLTR22_Mur LTR ERVK 516 800 -1048 1 875 234 128 0 0 chr17 38087794 38087833 -57184818 + (CAT)n Simple_repeat Simple_repeat 2 40 0 1 875 293 291 23 11 chr17 38088010 38088097 -57184554 + RMER12 LTR ERVK 1101 1188 -134 1 875 318 278 0 27 chr17 38088119 38088193 -57184458 - B1F2 SINE Alu -52 97 26 1 875 1567 32 21 0 chr17 38088318 38088507 -57184144 + B2_Mm1a SINE B2 1 193 0 1 875 336 67 50 0 chr17 38090026 38090086 -57182565 + (TA)n Simple_repeat Simple_repeat 1 63 0 1 875 279 0 0 0 chr17 38090818 38090849 -57181802 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 875 3109 8 43 0 chr17 38090951 38091303 -57181348 + IAPLTR1_Mm LTR ERVK 1 367 0 1 875 52780 24 19 1 chr17 38091303 38097667 -57174984 + IAPEz-int LTR ERVK 8 6481 0 1 875 3109 8 43 0 chr17 38097667 38098019 -57174632 + IAPLTR1_Mm LTR ERVK 1 367 0 1 875 197 392 40 26 chr17 38099362 38099514 -57173137 - MER5A DNA MER1_type 0 189 36 1 875 468 0 0 0 chr17 38100076 38100128 -57172523 + (TC)n Simple_repeat Simple_repeat 2 53 0 1 875 447 330 115 16 chr17 38100623 38100987 -57171664 + L1MD2 LINE L1 5721 6120 -239 1 875 1350 244 178 0 chr17 38101329 38101677 -57170974 + MTD LTR MaLR 1 410 -9 1 875 261 261 29 0 chr17 38101720 38101789 -57170862 + Lx8 LINE L1 6843 6913 -560 1 875 498 274 108 26 chr17 38101820 38102015 -57170636 + Lx8 LINE L1 6971 7181 -292 1 875 23 0 0 0 chr17 38103030 38103053 -57169598 + AT_rich Low_complexity Low_complexity 1 23 0 1 875 915 67 0 0 chr17 38103191 38103310 -57169341 + B1_Mus1 SINE Alu 27 145 -3 1 875 244 25 75 0 chr17 38103310 38103350 -57169301 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 875 2992 269 47 17 chr17 38103384 38104282 -57168369 + Lx5 LINE L1 6126 7050 0 1 875 8551 59 13 1 chr17 38105220 38107047 -57165604 - L1Md_F2 LINE L1 0 6582 4736 1 875 1461 87 0 0 chr17 38107042 38107249 -57165402 + L1Md_F2 LINE L1 4541 4747 -1136 1 875 717 205 6 80 chr17 38107488 38107663 -57164988 - RLTR19 LTR ERVK 0 499 338 1 875 978 269 55 113 chr17 38107686 38108242 -57164409 - RLTR20C LTR ERVK -23 511 1 1 875 592 325 19 122 chr17 38108242 38108598 -57164053 - RLTR19 LTR ERVK -158 341 23 1 875 49 71 0 0 chr17 38109660 38109758 -57162893 + AT_rich Low_complexity Low_complexity 1 98 0 1 875 183 162 0 0 chr17 38109769 38109806 -57162845 + (TATG)n Simple_repeat Simple_repeat 3 39 0 1 875 25 65 0 0 chr17 38109816 38109862 -57162789 + AT_rich Low_complexity Low_complexity 1 46 0 1 875 2525 190 48 77 chr17 38109992 38110551 -57162100 + RLTR18 LTR ERVK 72 614 -2 1 875 1489 223 63 82 chr17 38110589 38110945 -57161706 + RMER20B LTR ERVK 1 374 -253 1 875 4246 47 2 17 chr17 38110945 38111465 -57161186 + LTRIS3 LTR ERV1 1 512 0 1 875 1489 223 63 82 chr17 38111465 38111586 -57161065 + RMER20B LTR ERVK 375 469 -158 1 875 837 133 7 0 chr17 38112241 38112376 -57160275 + Lx5 LINE L1 6477 6612 -438 1 875 937 78 118 43 chr17 38113137 38113298 -57159353 + B2_Mm1t SINE B2 2 174 -19 1 875 1039 312 85 53 chr17 38113638 38114440 -57158211 + MYSERV-int LTR ERVK 3774 4602 -1948 1 875 912 94 47 0 chr17 38114440 38114568 -57158083 + B1_Mus1 SINE Alu 2 135 -13 1 875 270 0 0 0 chr17 38114568 38114598 -57158053 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1 875 1039 312 85 53 chr17 38114598 38114707 -57157944 + MYSERV-int LTR ERVK 4603 4715 -1835 1 875 3270 53 2 0 chr17 38115211 38115606 -57157045 - MTA_Mm LTR MaLR 0 396 1 1 875 1044 301 37 61 chr17 38116504 38117042 -57155609 - Lx6 LINE L1 -1113 6347 5823 1 875 1647 36 0 0 chr17 38117201 38117393 -57155258 + B2_Mm1t SINE B2 1 192 -1 1 875 1658 227 42 25 chr17 38117571 38118005 -57154646 + BGLII_B LTR ERVK 1 441 0 1 875 1413 165 4 0 chr17 38118627 38118887 -57153764 - L1_Mur2 LINE L1 -1348 4529 4269 1 875 220 368 85 34 chr17 38118889 38119007 -57153644 + RSINE1 SINE B4 42 165 0 1 875 225 354 0 0 chr17 38119086 38119165 -57153486 + RSINE1 SINE B4 87 165 0 1 875 1127 95 0 0 chr17 38119336 38119483 -57153168 - B1_Mus1 SINE Alu 0 148 2 1 875 437 252 165 0 chr17 38119568 38119671 -57152980 + B1F2 SINE Alu 22 141 -8 1 875 427 344 0 23 chr17 38119982 38120113 -57152538 + B3 SINE B2 53 180 -36 1 875 1190 186 9 5 chr17 38120236 38120458 -57152193 + Lx4B LINE L1 6467 6689 -369 1 875 842 80 116 0 chr17 38120520 38120658 -57151993 - Lx3B LINE L1 -985 5988 5835 1 875 427 95 16 0 chr17 38120658 38120721 -57151930 + Lx3B LINE L1 6686 6749 -224 1 875 4381 65 2 10 chr17 38120922 38121497 -57151154 + L1Md_F2 LINE L1 6002 6571 -11 1 875 1847 202 2 73 chr17 38121866 38121886 -57150765 - RMER10B LTR ERVL 0 398 379 1 875 1083 83 7 0 chr17 38121886 38122030 -57150621 + B1_Mus1 SINE Alu 2 146 -2 1 875 1847 202 2 73 chr17 38122030 38122435 -57150216 - RMER10B LTR ERVL -20 378 3 1 875 2471 165 22 18 chr17 38122437 38122937 -57149714 - L1_Mur1 LINE L1 -836 5041 4540 1 875 255 299 89 84 chr17 38122985 38123164 -57149487 - RLTR25B LTR ERVK 0 1028 849 1 875 3013 58 36 5 chr17 38123300 38123684 -57148967 - MTA_Mm LTR MaLR 0 396 1 1 875 22 0 0 0 chr17 38124144 38124166 -57148485 + AT_rich Low_complexity Low_complexity 1 22 0 1 875 1077 148 6 11 chr17 38124185 38124363 -57148288 + BGLII_B LTR ERVK 1 177 -264 1 875 331 228 0 0 chr17 38124425 38124504 -57148147 - L1_Mur1 LINE L1 -6151 833 755 1 875 28 0 0 0 chr17 38124549 38124577 -57148074 + GC_rich Low_complexity Low_complexity 1 28 0 1 875 1136 172 91 124 chr17 38124627 38124925 -57147726 - ORR1A4 LTR MaLR -40 289 2 1 875 1089 133 28 121 chr17 38124942 38125190 -57147461 - ORR1A4-int LTR MaLR -191 1772 1548 1 875 737 173 101 95 chr17 38125191 38125370 -57147281 - ORR1A4 LTR MaLR -149 180 1 1 875 3746 198 46 13 chr17 38125370 38125662 -57146989 - Lx5 LINE L1 -603 6447 6153 1 875 288 0 0 0 chr17 38125662 38125694 -57146957 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 875 3826 201 28 73 chr17 38125694 38126575 -57146076 - Lx5 LINE L1 -898 6152 5280 1 875 601 50 0 12 chr17 38126575 38126656 -57145995 - B1_Mus2 SINE Alu -5 142 63 1 875 3826 201 28 73 chr17 38126656 38127131 -57145520 - Lx5 LINE L1 -898 5279 4808 1 875 312 132 0 19 chr17 38127132 38127186 -57145465 + RLTR15 LTR ERVK 1 53 -306 1 875 210 222 0 22 chr17 38127305 38127351 -57145300 + PB1D7 SINE Alu 16 60 -60 1 875 2475 217 51 27 chr17 38127424 38128048 -57144603 + RLTR25B LTR ERVK 390 1028 0 1 875 676 153 153 0 chr17 38128056 38128187 -57144464 + RLTR11B LTR ERVK 303 453 0 1 875 1012 174 0 0 chr17 38128187 38128388 -57144263 - Lx5 LINE L1 -2990 2887 2687 1 875 2536 181 46 138 chr17 38128474 38128763 -57143888 - RLTR18 LTR ERVK 0 616 390 1 875 1185 50 0 0 chr17 38128763 38128903 -57143748 - B1_Mus2 SINE Alu -7 140 1 1 875 2536 181 46 138 chr17 38128903 38129292 -57143359 - RLTR18 LTR ERVK -227 389 1 1 875 4160 71 0 0 chr17 38129424 38129958 -57142693 + L1Md_F2 LINE L1 6037 6570 -12 1 875 543 259 0 53 chr17 38129999 38130082 -57142569 + RSINE1 SINE B4 58 139 -26 2 875 2212 97 18 59 chr17 38130082 38130423 -57142228 + ORR1A2 LTR MaLR 1 327 0 2 875 543 259 0 53 chr17 38130423 38130453 -57142198 + RSINE1 SINE B4 140 165 0 2 875 29 28 0 0 chr17 38130483 38130519 -57142132 + AT_rich Low_complexity Low_complexity 1 36 0 2 875 22 70 0 0 chr17 38130664 38130707 -57141944 + AT_rich Low_complexity Low_complexity 1 43 0 2 875 498 324 15 56 chr17 38130710 38130906 -57141745 + B3 SINE B2 4 191 -25 2 875 1105 73 0 0 chr17 38131319 38131456 -57141195 + B1_Mus2 SINE Alu 1 137 -10 2 875 216 0 0 0 chr17 38131456 38131480 -57141171 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 875 934 260 215 83 chr17 38131639 38132109 -57140542 + MT2A LTR ERVL 1 532 -1 2 875 1440 268 60 32 chr17 38134280 38134812 -57137839 - Lx6 LINE L1 -1125 6335 5789 2 875 755 205 36 68 chr17 38134832 38135052 -57137599 - Lx4B LINE L1 -5 7053 6841 2 875 890 220 5 38 chr17 38135059 38135272 -57137379 + RLTR21 LTR ERVK 1359 1564 -8 2 875 21 57 0 0 chr17 38135351 38135386 -57137265 + AT_rich Low_complexity Low_complexity 1 35 0 2 875 1543 163 10 90 chr17 38135389 38135576 -57137075 - L1_Mur2 LINE L1 -4006 1874 1720 2 875 1092 83 14 0 chr17 38135576 38135721 -57136930 - B1_Mus2 SINE Alu 0 147 1 2 875 1543 163 10 90 chr17 38135721 38135944 -57136707 - L1_Mur2 LINE L1 -4161 1719 1497 2 875 2183 128 0 11 chr17 38135941 38136289 -57136362 - L1_Mur1 LINE L1 -34 5852 5509 2 875 981 70 63 0 chr17 38136287 38136445 -57136206 + L1_Mur1 LINE L1 3857 4024 -1862 2 875 997 225 21 0 chr17 38136449 38136689 -57135962 - L1_Mur2 LINE L1 -5927 1159 915 2 875 754 133 199 6 chr17 38136859 38137025 -57135626 - Lx6 LINE L1 -1676 5784 5587 2 875 4195 231 65 88 chr17 38137038 38137428 -57135223 - L1_Mur3 LINE L1 -2824 3056 2717 2 875 730 88 21 21 chr17 38137428 38137568 -57135083 + L1_Mus3 LINE L1 6499 6638 0 2 875 4195 231 65 88 chr17 38137568 38137974 -57134677 - L1_Mur3 LINE L1 -3164 2716 2336 2 875 1146 88 0 0 chr17 38137974 38138122 -57134529 - B1_Mus1 SINE Alu 0 148 1 2 875 4195 231 65 88 chr17 38138122 38138383 -57134268 - L1_Mur3 LINE L1 -3545 2335 2072 2 875 189 107 0 0 chr17 38138383 38138411 -57134240 + (TGG)n Simple_repeat Simple_repeat 3 30 0 2 875 4195 231 65 88 chr17 38138411 38138910 -57133741 - L1_Mur3 LINE L1 -3809 2071 1596 2 875 1415 52 0 0 chr17 38138910 38139082 -57133569 - B2_Mm1a SINE B2 -19 174 3 2 875 4195 236 36 59 chr17 38139082 38139772 -57132879 - L1_Mur3 LINE L1 -4285 1595 862 2 875 421 307 0 78 chr17 38140589 38140755 -57131896 + B3A SINE B2 30 182 -16 2 875 887 321 68 55 chr17 38141552 38141870 -57130781 + MTD LTR MaLR 1 325 -94 2 109 2668 92 28 2 chr17 38141870 38142263 -57130388 - RLTR9D LTR ERVK 0 403 1 2 876 887 321 68 55 chr17 38142263 38142343 -57130308 + MTD LTR MaLR 326 404 -15 2 876 649 330 120 25 chr17 38142373 38142814 -57129837 + MTD-int LTR MaLR 12 494 -876 2 876 2003 306 56 52 chr17 38142831 38143640 -57129011 + MTD-int LTR MaLR 559 1370 0 2 876 325 378 101 4 chr17 38143640 38143887 -57128764 + MTD LTR MaLR 1 271 -88 2 876 1201 82 17 12 chr17 38143951 38144124 -57128527 - B2_Mm2 SINE B2 -11 184 11 2 876 385 266 68 38 chr17 38144127 38144255 -57128396 - B1_Mur3 SINE Alu 0 149 18 2 876 512 197 59 8 chr17 38144255 38144373 -57128278 + RLTR25A LTR ERVK 1 124 -904 2 876 186 103 0 0 chr17 38144386 38144415 -57128236 + (TCTA)n Simple_repeat Simple_repeat 4 32 0 2 876 381 151 47 24 chr17 38144415 38144585 -57128066 + (TA)n Simple_repeat Simple_repeat 1 174 0 2 876 547 78 11 11 chr17 38144606 38144697 -57127954 + (TAGA)n Simple_repeat Simple_repeat 4 94 0 2 876 1639 199 19 18 chr17 38144717 38145236 -57127415 + RLTR25A LTR ERVK 215 782 -246 2 876 437 279 41 8 chr17 38145231 38145354 -57127297 + RLTR25A LTR ERVK 898 1024 -4 2 876 453 320 65 35 chr17 38145606 38145807 -57126844 - B3 SINE B2 -8 208 2 2 876 1790 174 41 14 chr17 38145907 38146274 -57126377 + MurSatRep1 Unknown Unknown 1 377 -1760 2 876 266 73 24 0 chr17 38146300 38146341 -57126310 + (TC)n Simple_repeat Simple_repeat 2 43 0 2 876 8400 164 39 26 chr17 38146341 38148095 -57124556 + MurSatRep1 Unknown Unknown 358 2135 -2 2 876 380 322 23 31 chr17 38148072 38148377 -57124274 + MurSatRep1 Unknown Unknown 1814 2047 -90 2 876 363 265 14 14 chr17 38148377 38148515 -57124136 + MMSAT4 Satellite Satellite 31 168 0 2 876 380 322 23 31 chr17 38148515 38148539 -57124112 + MurSatRep1 Unknown Unknown 2048 2066 -71 2 876 415 349 18 18 chr17 38148542 38149108 -57123543 + MurSatRep1 Unknown Unknown 1736 2049 -88 2 876 375 311 16 13 chr17 38149049 38149270 -57123381 + MMSAT4 Satellite Satellite 1 221 0 2 876 272 324 33 39 chr17 38149225 38149402 -57123249 + MurSatRep1 Unknown Unknown 1747 1962 -175 2 876 276 333 0 0 chr17 38149402 38149528 -57123123 + MMSAT4 Satellite Satellite 43 168 0 2 876 272 324 33 39 chr17 38149528 38149597 -57123054 + MurSatRep1 Unknown Unknown 1963 2049 -88 2 876 2423 53 0 0 chr17 38151521 38151825 -57120826 + L1Md_F2 LINE L1 6267 6570 -12 2 876 2518 45 0 0 chr17 38152302 38152613 -57120038 + L1Md_A LINE L1 6272 6582 0 2 876 208 0 62 0 chr17 38152678 38152710 -57119941 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 876 998 77 46 0 chr17 38152710 38152840 -57119811 - B1_Mus1 SINE Alu -11 137 2 2 876 917 178 82 131 chr17 38153076 38153321 -57119330 + RLTR25B LTR ERVK 1 233 -795 2 876 1712 192 68 3 chr17 38153320 38153685 -57118966 + RLTR25B LTR ERVK 389 777 -251 2 876 591 15 0 0 chr17 38153842 38153910 -57118741 + (TG)n Simple_repeat Simple_repeat 2 69 0 2 876 268 284 13 13 chr17 38154267 38154342 -57118309 + RSINE1 SINE B4 4 78 -87 2 876 289 384 54 7 chr17 38154442 38154589 -57118062 + RSINE1 SINE B4 12 165 0 2 876 488 298 14 14 chr17 38155162 38155306 -57117345 + B3 SINE B2 39 182 -34 2 876 430 340 77 23 chr17 38155353 38155557 -57117094 - B3 SINE B2 -8 187 1 2 876 477 0 0 0 chr17 38156211 38156264 -57116387 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 876 245 333 24 0 chr17 38156342 38156426 -57116225 - B1F SINE Alu -2 147 62 2 876 2010 239 82 16 chr17 38156861 38157431 -57115220 - Lx5 LINE L1 0 7050 6443 2 876 1185 199 34 110 chr17 38157431 38157787 -57114864 - ORR1A4 LTR MaLR 0 329 1 2 876 5608 169 18 131 chr17 38157788 38158859 -57113792 - ORR1A4-int LTR MaLR -1 1962 1028 2 876 1108 75 7 0 chr17 38158859 38159005 -57113646 - B1_Mus1 SINE Alu 0 148 2 2 876 5608 169 18 131 chr17 38159005 38159017 -57113634 - ORR1A3-int LTR MaLR -936 1027 1027 2 876 4882 102 3 4 chr17 38159017 38159718 -57112933 - L1Md_F2 LINE L1 -1 6581 5882 2 876 5608 169 18 131 chr17 38159718 38160100 -57112551 - ORR1A4-int LTR MaLR -936 1027 662 2 876 207 0 0 0 chr17 38160127 38160150 -57112501 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2 876 881 75 17 0 chr17 38160656 38160776 -57111875 - B1_Mus1 SINE Alu 0 148 27 2 876 508 241 28 55 chr17 38160776 38160801 -57111850 - ID_B1 SINE B4 0 224 84 2 876 888 295 92 25 chr17 38160803 38161203 -57111448 - Lx8 LINE L1 -423 7050 6624 2 876 1476 264 70 16 chr17 38161230 38161599 -57111052 - MTD LTR MaLR -26 393 5 2 876 313 284 98 0 chr17 38161603 38161705 -57110946 - Lx8 LINE L1 -852 6621 6510 2 876 3766 61 4 6 chr17 38162099 38162581 -57110070 + RLTR45 LTR ERVK 2 482 0 2 876 3009 176 73 10 chr17 38163324 38163928 -57108723 - RLTR26 LTR ERVK 0 642 1 2 876 204 67 0 0 chr17 38164266 38164296 -57108355 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 2 876 843 227 30 61 chr17 38164732 38164929 -57107722 + B3 SINE B2 1 191 -25 2 876 246 360 0 57 chr17 38165506 38165612 -57107039 + MER5A DNA MER1_type 90 189 0 2 876 2150 43 7 31 chr17 38165742 38166031 -57106620 + L1_Mus1 LINE L1 6286 6567 0 2 876 1301 163 40 4 chr17 38166153 38166400 -57106251 - Lx4A LINE L1 -278 6780 6525 2 876 346 343 32 27 chr17 38166431 38166520 -57106131 - MurSatRep1 Unknown Unknown -88 2049 2013 2 876 269 309 26 26 chr17 38166520 38166673 -57105978 - MMSAT4 Satellite Satellite 0 168 16 2 876 346 343 32 27 chr17 38166673 38167307 -57105344 - MurSatRep1 Unknown Unknown -88 2012 1747 2 876 624 63 0 90 chr17 38167358 38167480 -57105171 + MusHAL1 LINE L1 624 734 -2620 2 876 3193 148 5 135 chr17 38167479 38168092 -57104559 + L1_Mur2 LINE L1 3756 4322 -1555 2 876 908 117 80 0 chr17 38168092 38168229 -57104422 + B1_Mus1 SINE Alu 1 148 0 2 876 3193 148 5 135 chr17 38168229 38168395 -57104256 + L1_Mur2 LINE L1 4323 4434 -1443 2 876 367 184 15 174 chr17 38168422 38168554 -57104097 + L1VL1 LINE L1 247 357 -6065 2 876 408 236 55 7 chr17 38168628 38168773 -57103878 + L1Md_F LINE L1 664 815 -5801 2 876 3857 203 67 27 chr17 38168770 38170385 -57102266 + L1Md_F LINE L1 4118 5419 -461 2 876 242 148 18 36 chr17 38170385 38170441 -57102210 + T-rich Low_complexity Low_complexity 5 59 0 2 876 7340 62 4 7 chr17 38170442 38171165 -57101486 - L1_Mus1 LINE L1 0 6654 5852 2 876 3568 23 6 136 chr17 38171165 38171711 -57100940 - IAPLTR2_Mm LTR ERVK 0 475 1 2 876 9999 90 2 12 chr17 38171711 38172348 -57100303 - L1_Mus1 LINE L1 -716 5851 5217 2 876 2887 116 31 47 chr17 38172348 38172838 -57099813 - RLTR45 LTR ERVK 0 482 1 2 876 9999 110 1 15 chr17 38172838 38173768 -57098883 - L1_Mus1 LINE L1 -667 5216 4307 2 876 1171 238 39 62 chr17 38173769 38174127 -57098524 + L1Md_F LINE L1 5414 5763 -114 2 876 465 303 51 17 chr17 38174153 38174441 -57098210 + Lx6 LINE L1 721 1031 -5953 2 876 909 218 63 36 chr17 38174441 38174693 -57097958 - RLTR21 LTR ERVK -410 1162 904 2 876 670 242 8 0 chr17 38174693 38174825 -57097826 + ETnERV2-int LTR ERVK 7070 7202 -204 2 876 3191 70 2 43 chr17 38174943 38175389 -57097262 + L1_Mus2 LINE L1 6139 6566 0 2 876 2622 184 15 11 chr17 38175394 38175860 -57096791 - RLTR21 LTR ERVK -1104 468 1 2 876 1819 136 21 3 chr17 38175895 38176220 -57096431 - L1_Mur2 LINE L1 -1768 4109 3779 2 876 693 219 11 1 chr17 38176224 38176451 -57096200 + Lx6 LINE L1 1987 2219 -3661 2 876 2644 171 107 41 chr17 38176450 38177208 -57095443 + Lx6 LINE L1 2777 3584 -2293 2 876 1903 215 18 27 chr17 38177653 38177714 -57094937 - BGLII_B LTR ERVK 0 441 382 2 876 1581 174 110 11 chr17 38177714 38177909 -57094742 + RMER17C LTR ERVK 1 231 -179 2 876 477 50 0 0 chr17 38177909 38177969 -57094682 + (TCCCC)n Simple_repeat Simple_repeat 3 62 0 2 876 528 56 0 0 chr17 38177971 38178043 -57094608 + (TC)n Simple_repeat Simple_repeat 2 73 0 2 876 1581 174 110 11 chr17 38178043 38178217 -57094434 + RMER17C LTR ERVK 232 407 -3 2 876 1903 215 18 27 chr17 38178217 38178600 -57094051 - BGLII_B LTR ERVK -60 381 3 2 876 642 168 9 0 chr17 38178621 38178728 -57093923 + RMER10B LTR ERVL 291 398 0 2 876 1262 181 4 8 chr17 38178728 38178990 -57093661 + Lx6 LINE L1 5036 5296 -581 2 876 6869 108 16 0 chr17 38178990 38180023 -57092628 + Lx LINE L1 5605 6653 -1 2 876 261 83 0 0 chr17 38180025 38180061 -57092590 + (GAAAA)n Simple_repeat Simple_repeat 3 38 0 2 876 1274 80 11 6 chr17 38180083 38180259 -57092392 + B2_Mm2 SINE B2 1 177 -18 2 876 391 99 165 0 chr17 38180275 38180366 -57092285 + Lx4B LINE L1 5256 5361 -516 2 876 759 113 177 0 chr17 38180366 38180490 -57092161 + B1_Mus1 SINE Alu 1 146 -2 2 876 873 138 0 0 chr17 38180503 38180648 -57092003 + (GAA)n Simple_repeat Simple_repeat 3 147 0 2 876 1049 86 23 11 chr17 38180648 38180824 -57091827 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 2 876 5458 183 18 3 chr17 38180837 38182087 -57090564 + Lx4B LINE L1 5370 6646 -412 2 876 807 241 8 50 chr17 38182108 38182348 -57090303 + Lx4B LINE L1 6822 7051 -7 2 876 1530 277 42 20 chr17 38182372 38182918 -57089733 + Lx6 LINE L1 5790 6347 -1113 2 876 2164 124 43 119 chr17 38184115 38184629 -57088022 + IAPLTR2_Mm LTR ERVK 1 475 0 2 876 328 75 0 0 chr17 38184631 38184684 -57087967 + IAPEz-int LTR ERVK 3 55 -1932 2 876 349 98 129 118 chr17 38184688 38184781 -57087870 + IAPEz-int LTR ERVK 17 110 -6371 2 876 227 276 103 0 chr17 38184781 38184839 -57087812 + RLTR27 LTR ERVK 212 275 -34 2 876 226 327 0 0 chr17 38184865 38184920 -57087731 + RLTR27 LTR ERVK 221 275 -34 2 876 226 321 0 0 chr17 38184948 38185001 -57087650 + RLTR27 LTR ERVK 223 275 -34 2 876 226 327 0 0 chr17 38185027 38185082 -57087569 + RLTR27 LTR ERVK 221 275 -34 2 876 3370 64 1 16 chr17 38185082 38185660 -57086991 + IAPEz-int LTR ERVK 168 662 -5819 2 876 2090 72 0 0 chr17 38185660 38185938 -57086713 + IAPEz-int LTR ERVK 1359 1636 -4845 2 876 5713 45 14 1 chr17 38185937 38186674 -57085977 + IAPEz-int LTR ERVK 5736 6481 0 2 876 2389 111 37 12 chr17 38186674 38187075 -57085576 + IAPLTR2a LTR ERVK 1 411 0 2 876 28 0 0 0 chr17 38187707 38187735 -57084916 + AT_rich Low_complexity Low_complexity 1 28 0 2 876 573 235 27 21 chr17 38188080 38188267 -57084384 + L1_Mur2 LINE L1 2700 2887 -2990 3 876 1052 233 9 0 chr17 38188356 38188566 -57084085 + B3 SINE B2 1 212 -4 3 876 254 115 0 19 chr17 38189402 38189455 -57083196 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 3 876 2866 58 0 19 chr17 38189504 38189875 -57082776 + L1_Mus1 LINE L1 6204 6567 0 3 876 259 295 38 0 chr17 38189875 38189980 -57082671 - L1MC4a LINE L1 -598 7284 7176 3 876 374 252 216 25 chr17 38190188 38190424 -57082227 - L1MC4a LINE L1 -863 7019 6739 3 876 480 35 0 0 chr17 38190478 38190536 -57082115 + (TG)n Simple_repeat Simple_repeat 2 59 0 3 876 368 352 0 0 chr17 38193453 38193558 -57079093 - PB1D10 SINE Alu -12 105 1 3 876 192 40 0 0 chr17 38194802 38194827 -57077824 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 3 876 526 34 44 11 chr17 38196761 38196851 -57075800 + (CA)n Simple_repeat Simple_repeat 1 93 0 3 876 310 285 132 71 chr17 38197483 38197763 -57074888 - L1M4 LINE L1 -2310 3836 3540 3 876 180 0 0 0 chr17 38198892 38198912 -57073739 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 3 876 626 68 0 11 chr17 38198944 38199033 -57073618 + (TTCC)n Simple_repeat Simple_repeat 1 88 0 3 876 1294 61 0 16 chr17 38199044 38199227 -57073424 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 876 1582 249 44 12 chr17 38199311 38199717 -57072934 - MTD LTR MaLR 0 419 1 3 876 825 187 208 4 chr17 38203499 38203639 -57069012 - Lx9 LINE L1 0 7644 7457 3 876 426 20 0 0 chr17 38203639 38203690 -57068961 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 876 825 187 208 4 chr17 38203690 38203828 -57068823 - Lx9 LINE L1 -188 7456 7309 3 876 297 135 0 0 chr17 38205812 38205864 -57066787 + (GGGAGA)n Simple_repeat Simple_repeat 3 54 0 3 876 23 0 0 0 chr17 38206421 38206444 -57066207 + AT_rich Low_complexity Low_complexity 1 23 0 3 876 404 362 60 0 chr17 38206894 38207043 -57065608 - B3A SINE B2 -30 168 11 3 876 255 274 103 34 chr17 38207214 38207418 -57065233 - L1M2 LINE L1 -3220 2923 2706 3 876 1104 281 59 26 chr17 38207418 38207758 -57064893 + MTD LTR MaLR 1 351 -68 3 876 1510 213 110 23 chr17 38207761 38208151 -57064500 - RMER6D LTR ERVK 0 720 297 3 876 1736 224 46 35 chr17 38208136 38208595 -57064056 - RMER6D LTR ERVK -255 465 2 3 876 9894 162 42 59 chr17 38208608 38210934 -57061717 - RMER6-int LTR ERVK -62 3115 920 3 876 1980 68 0 0 chr17 38210934 38211183 -57061468 + L1_Mus1 LINE L1 6319 6567 0 3 876 9894 156 47 58 chr17 38211183 38211197 -57061454 - RMER6-int LTR ERVK -2258 919 919 3 876 438 20 0 0 chr17 38211197 38211248 -57061403 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 3 876 9894 156 47 58 chr17 38211248 38211633 -57061018 - RMER6-int LTR ERVK -2258 919 526 3 876 2391 179 126 51 chr17 38211637 38212266 -57060385 - RLTR33 LTR ERVK -2 676 1 3 876 926 186 110 64 chr17 38212446 38212727 -57059924 - RMER6-int LTR ERVK -2649 528 235 3 876 345 93 0 0 chr17 38213130 38213184 -57059467 + (TAAAA)n Simple_repeat Simple_repeat 2 55 0 3 876 1196 237 60 9 chr17 38213191 38213527 -57059124 - RodERV21-int LTR ERV1 -4013 978 626 3 876 4607 231 51 41 chr17 38213540 38213616 -57059035 + L1_Mur3 LINE L1 1709 1796 -4084 3 876 4785 114 84 3 chr17 38213616 38214373 -57058278 - Lx3_Mus LINE L1 -8 7001 6183 3 876 4607 231 51 41 chr17 38214373 38215710 -57056941 + L1_Mur3 LINE L1 1797 3139 -2741 3 876 1154 82 0 0 chr17 38215710 38215857 -57056794 + B1_Mus2 SINE Alu 1 147 0 3 876 4607 231 51 41 chr17 38215857 38215978 -57056673 + L1_Mur3 LINE L1 3140 3259 -2621 3 876 618 139 50 0 chr17 38216016 38216117 -57056534 - ORR1A3 LTR MaLR -220 106 1 3 876 725 227 10 20 chr17 38216121 38216319 -57056332 + L1_Mur3 LINE L1 3268 3463 -2417 3 876 267 200 0 0 chr17 38216319 38216374 -57056277 + Lx3A LINE L1 6920 6974 -7 3 876 277 266 0 0 chr17 38216427 38216491 -57056160 - ID4_ SINE ID -13 70 7 3 876 223 288 73 24 chr17 38216489 38216571 -57056080 - PB1D9 SINE Alu -1 119 34 3 876 323 111 0 0 chr17 38217603 38217648 -57055003 - HAL1-3A_ME LINE L1 -835 2023 1979 3 876 231 173 0 0 chr17 38217652 38217704 -57054947 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 876 23 54 0 0 chr17 38217899 38217936 -57054715 + AT_rich Low_complexity Low_complexity 1 37 0 3 876 22 0 0 0 chr17 38217956 38217978 -57054673 + AT_rich Low_complexity Low_complexity 1 22 0 3 876 1330 63 0 0 chr17 38218472 38218646 -57054005 - L1Md_T LINE L1 0 6582 6409 3 876 304 333 20 20 chr17 38220177 38220278 -57052373 + PB1D7 SINE Alu 8 108 -12 3 876 201 154 0 49 chr17 38220307 38220348 -57052303 + A-rich Low_complexity Low_complexity 3 41 0 3 876 1916 131 97 3 chr17 38221295 38221616 -57051035 - Lx2 LINE L1 0 6997 6647 3 876 435 117 38 38 chr17 38222051 38222131 -57050520 - RLTR11A LTR ERVK -1 527 448 3 876 4825 139 30 4 chr17 38222132 38222909 -57049742 + Lx4A LINE L1 6232 7028 -30 3 876 327 155 35 0 chr17 38222915 38222973 -57049678 - RLTR11A LTR ERVK -468 60 1 3 876 1634 208 67 22 chr17 38222984 38223432 -57049219 - MYSERV16_I-int LTR ERVK -75 2251 1831 3 876 1211 187 0 22 chr17 38223429 38223703 -57048948 - MYSERV16_I-int LTR ERVK -1023 1303 1036 3 876 260 304 53 21 chr17 38223705 38223799 -57048852 - RMER4A LTR ERVK -42 424 328 3 876 261 195 0 25 chr17 38223801 38223880 -57048771 - MYSERV16_I-int LTR ERVK -1401 925 849 3 876 367 327 163 28 chr17 38226251 38226607 -57046044 - L1M5 LINE L1 -516 5657 5254 3 876 342 0 0 0 chr17 38226632 38226670 -57045981 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 876 25 0 0 0 chr17 38226681 38226706 -57045945 + AT_rich Low_complexity Low_complexity 1 25 0 3 876 1346 305 72 47 chr17 38227320 38228368 -57044283 - L1M2 LINE L1 -1342 4801 3728 3 876 966 259 123 77 chr17 38228664 38228935 -57043716 - RMER12B LTR ERVK -7 1565 1277 3 876 1865 180 32 3 chr17 38228935 38229275 -57043376 + Lx2 LINE L1 6648 6997 0 3 876 966 252 162 60 chr17 38229275 38229435 -57043216 - RMER12B LTR ERVK -296 1276 1115 3 876 462 49 0 0 chr17 38229435 38229496 -57043155 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 876 2617 234 107 23 chr17 38229496 38230429 -57042222 - RMER12B LTR ERVK -204 1200 1 3 876 1286 278 51 84 chr17 38230597 38230896 -57041755 - Lx6 LINE L1 -22 7438 7122 3 876 1102 89 0 0 chr17 38230896 38231042 -57041609 + B1_Mm SINE Alu 2 147 0 3 876 1286 264 19 59 chr17 38231042 38231272 -57041379 - Lx6 LINE L1 -339 7121 6945 3 876 349 305 83 13 chr17 38231291 38231447 -57041204 - Lx6 LINE L1 -644 6816 6650 3 876 351 0 0 0 chr17 38231469 38231508 -57041143 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 876 1875 236 168 15 chr17 38231551 38231865 -57040786 - RMER20B LTR ERVK -22 605 275 3 876 2751 89 10 3 chr17 38231865 38232257 -57040394 + L1_Mus3 LINE L1 6243 6637 -1 3 876 1875 236 168 15 chr17 38232257 38232467 -57040184 - RMER20B LTR ERVK -353 274 2 3 876 899 300 27 2 chr17 38232468 38232752 -57039899 - Lx6 LINE L1 -612 6438 6122 3 876 443 313 80 35 chr17 38233100 38233411 -57039240 - L1M5 LINE L1 -1600 4546 4222 3 876 201 119 23 23 chr17 38233577 38233620 -57039031 + A-rich Low_complexity Low_complexity 2 44 0 3 876 1549 172 12 4 chr17 38234016 38234290 -57038361 - ORR1A4 LTR MaLR -49 345 14 3 876 1033 54 15 0 chr17 38234290 38234420 -57038231 - B1_Mm SINE Alu -13 134 3 3 876 1219 206 146 0 chr17 38234420 38234446 -57038205 - ORR1A4 LTR MaLR -367 27 2 3 876 4994 133 67 106 chr17 38234446 38235359 -57037292 - ORR1A4-int LTR MaLR 0 1963 1076 3 876 3278 69 2 0 chr17 38235359 38235793 -57036858 + L1Md_F2 LINE L1 6148 6582 0 3 876 4994 133 67 106 chr17 38235793 38235964 -57036687 - ORR1A4-int LTR MaLR -888 1075 921 3 876 434 282 91 0 chr17 38235961 38236071 -57036580 - B1_Mm SINE Alu -25 122 3 3 876 358 253 72 62 chr17 38235984 38236081 -57036570 - MT2B LTR ERVL -347 254 157 3 876 325 274 112 9 chr17 38236085 38236192 -57036459 - PB1D9 SINE Alu 0 120 3 3 876 690 143 0 9 chr17 38236098 38236211 -57036440 - MT2B LTR ERVL -342 259 148 3 876 3830 66 35 8 chr17 38236598 38237115 -57035536 - L1Md_F2 LINE L1 -7 6575 6045 3 876 385 343 21 21 chr17 38237236 38237379 -57035272 + B1F1 SINE Alu 6 148 -1 3 876 249 65 0 0 chr17 38237398 38237429 -57035222 + ID4 SINE ID 10 40 -43 3 876 234 91 0 0 chr17 38237625 38237658 -57034993 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 3 876 516 145 0 0 chr17 38237785 38237902 -57034749 + (TC)n Simple_repeat Simple_repeat 2 118 0 3 876 562 265 75 8 chr17 38237907 38238040 -57034611 - B1_Mur1 SINE Alu -5 144 3 3 876 6547 58 6 19 chr17 38238325 38239191 -57033460 + L1Md_F2 LINE L1 5726 6580 -2 3 876 1527 32 16 0 chr17 38240032 38240217 -57032434 + B2_Mm1t SINE B2 1 188 -5 3 876 6984 39 7 0 chr17 38240351 38241195 -57031456 - L1Md_F2 LINE L1 0 6582 5733 3 876 6550 61 4 1 chr17 38241180 38242005 -57030646 + L1Md_F2 LINE L1 4930 5756 -127 3 876 39 38 0 0 chr17 38242202 38242255 -57030396 + AT_rich Low_complexity Low_complexity 1 53 0 3 876 562 173 0 0 chr17 38242256 38242360 -57030291 - Lx3A LINE L1 -5 6976 6873 3 876 2529 303 86 37 chr17 38242456 38243680 -57028971 - Lx9 LINE L1 -4 7640 6357 3 876 2055 255 63 58 chr17 38243674 38244502 -57028149 + L1_Rod LINE L1 3713 4544 -1303 3 876 22 0 0 0 chr17 38245181 38245203 -57027448 + AT_rich Low_complexity Low_complexity 1 22 0 3 876 1829 159 3 61 chr17 38246325 38246667 -57025984 + ORR1A2 LTR MaLR 6 327 0 3 876 765 285 38 57 chr17 38246669 38247093 -57025558 + L1M2 LINE L1 5356 5771 -529 3 876 201 292 18 54 chr17 38247631 38247743 -57024908 + GA-rich Low_complexity Low_complexity 1 108 0 3 876 348 285 101 65 chr17 38247761 38247930 -57024721 + HAL1-3A_ME LINE L1 2265 2439 -419 3 876 2221 186 15 15 chr17 38248626 38249034 -57023617 - RLTR20B3 LTR ERVK -4 573 166 3 876 773 313 71 64 chr17 38249195 38249902 -57022749 + MER21-int LTR ERV1 687 1309 -2882 3 876 7154 124 23 4 chr17 38250884 38251988 -57020663 - Lx2 LINE L1 -2 6995 5871 3 876 437 167 0 14 chr17 38251988 38252061 -57020590 - B2_Mm2 SINE B2 -120 75 4 3 876 435 147 0 0 chr17 38252065 38252133 -57020518 + Lx6 LINE L1 3516 3583 -2297 3 876 3070 176 8 28 chr17 38252136 38252750 -57019901 - L1_Mur2 LINE L1 -721 5156 4555 3 876 359 196 56 9 chr17 38252748 38252856 -57019795 + Lx5 LINE L1 6938 7050 0 3 876 4092 186 58 12 chr17 38252861 38253818 -57018833 + Lx6 LINE L1 3567 4566 -1314 3 876 2138 206 10 44 chr17 38253823 38254305 -57018346 - RMER4A LTR ERVK 0 466 1 3 876 3040 184 2 19 chr17 38254305 38254887 -57017764 - MurERV4-int LTR ERVK 0 5260 4689 3 876 2947 188 128 5 chr17 38255105 38255709 -57016942 + RLTR33 LTR ERVK 1 678 0 3 876 6180 149 37 24 chr17 38255709 38256881 -57015770 - MurERV4-int LTR ERVK -567 4693 3507 3 876 1503 224 157 19 chr17 38256882 38257346 -57015305 + RLTR12B LTR ERVK 1 528 0 3 876 5889 161 10 7 chr17 38257350 38258352 -57014299 - MurERV4-int LTR ERVK -1757 3503 2499 3 876 4667 135 46 19 chr17 38258371 38259202 -57013449 - Lx2 LINE L1 0 6997 6145 3 876 514 214 34 41 chr17 38259226 38259372 -57013279 - MurERV4-int LTR ERVK -2720 2540 2396 3 876 2912 231 51 91 chr17 38259376 38260413 -57012238 + RMER17B LTR ERVK 1 958 0 3 876 1991 186 241 10 chr17 38260418 38260893 -57011758 - MurERV4-int LTR ERVK -2868 2392 1799 3 876 4477 56 7 9 chr17 38260893 38261456 -57011195 - LTRIS2 LTR ERV1 0 564 3 3 876 1991 207 32 26 chr17 38261456 38262174 -57010477 - MurERV4-int LTR ERVK -3462 1798 1000 3 876 2334 136 9 65 chr17 38262174 38262606 -57010045 - RLTR9E LTR ERVK 0 409 2 3 876 4833 182 30 32 chr17 38262607 38263589 -57009062 - MurERV4-int LTR ERVK -4255 1005 25 3 876 1977 208 73 2 chr17 38263605 38264029 -57008622 - RMER4A LTR ERVK -12 454 1 3 876 2202 195 44 44 chr17 38264029 38264218 -57008433 + Lx6 LINE L1 4567 4745 -1135 3 876 444 82 0 0 chr17 38264218 38264279 -57008372 + (TA)n Simple_repeat Simple_repeat 2 62 0 4 876 2202 195 44 44 chr17 38264279 38264657 -57007994 + Lx6 LINE L1 4746 5133 -747 3 876 1355 201 7 4 chr17 38264672 38264944 -57007707 + Lx6 LINE L1 5450 5727 -1323 3 876 3406 202 59 62 chr17 38264972 38265869 -57006782 - RMER17B LTR ERVK -64 894 1 4 876 1256 240 26 15 chr17 38265880 38266222 -57006429 + Lx6 LINE L1 5725 6070 -1390 3 876 669 261 99 22 chr17 38266223 38266528 -57006123 + Lx6 LINE L1 6454 6894 -566 3 876 391 350 124 11 chr17 38266591 38266776 -57005875 + B3 SINE B2 8 213 -3 4 876 404 413 68 20 chr17 38270056 38270308 -57002343 + LTR16E1 LTR ERVL 43 306 -232 4 876 275 303 167 123 chr17 38270693 38270855 -57001796 + RLTR28 LTR ERVL 1 169 -355 4 876 4268 188 34 95 chr17 38270900 38271856 -57000795 - RMER19B LTR ERVK -5 897 1 4 876 6657 34 6 0 chr17 38272219 38273013 -56999638 + L1Md_F2 LINE L1 5783 6581 -1 4 877 206 310 89 10 chr17 38273066 38273167 -56999484 - MER5A DNA MER1_type -44 145 37 4 877 4339 68 9 3 chr17 38274798 38275375 -56997276 + L1Md_F2 LINE L1 5007 5586 -297 4 877 7580 71 1 5 chr17 38275376 38276365 -56996286 + L1Md_F2 LINE L1 5588 6572 -10 4 877 357 317 81 131 chr17 38276549 38276832 -56995819 + B4A SINE B4 6 274 -18 4 877 248 241 0 17 chr17 38276895 38276954 -56995697 + GA-rich Low_complexity Low_complexity 2 59 0 4 877 24 0 0 0 chr17 38277316 38277340 -56995311 + AT_rich Low_complexity Low_complexity 1 24 0 4 877 1412 250 110 39 chr17 38277347 38277981 -56994670 - Lx9 LINE L1 -8 7636 6952 4 877 1700 206 110 10 chr17 38277981 38278364 -56994287 - MTC LTR MaLR 0 421 1 4 877 1412 260 64 46 chr17 38278364 38278390 -56994261 - Lx9 LINE L1 -693 6951 6930 4 877 1465 155 100 27 chr17 38278394 38278693 -56993958 + ORR1A4 LTR MaLR 1 321 -8 4 877 491 204 120 0 chr17 38278693 38278801 -56993850 - Lx9 LINE L1 -710 6934 6814 4 877 357 24 0 0 chr17 38278858 38278900 -56993751 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 877 737 55 36 0 chr17 38278953 38279063 -56993588 - L1_Mus1 LINE L1 0 6567 6454 4 877 1655 244 91 10 chr17 38279067 38279476 -56993175 + Lx9 LINE L1 6355 6796 -848 4 877 6522 101 27 1 chr17 38279589 38280545 -56992106 + Lx3_Mus LINE L1 6026 7006 -3 4 877 2930 109 16 2 chr17 38280975 38281425 -56991226 + L1_Mus3 LINE L1 6175 6630 -8 4 877 1006 231 0 22 chr17 38283099 38283329 -56989322 - Lx6 LINE L1 -1431 6029 5805 4 877 801 262 29 41 chr17 38283321 38283564 -56989087 + Lx6 LINE L1 7147 7386 -74 4 877 1028 225 5 0 chr17 38283693 38283884 -56988767 + B3 SINE B2 1 192 -24 4 877 541 409 22 7 chr17 38285115 38285393 -56987258 - B4A SINE B4 -2 290 9 4 877 30 45 0 0 chr17 38286554 38286598 -56986053 + AT_rich Low_complexity Low_complexity 1 44 0 4 877 26 0 0 0 chr17 38286844 38286870 -56985781 + AT_rich Low_complexity Low_complexity 1 26 0 4 877 3977 92 2 42 chr17 38287209 38287799 -56984852 - L1_Mus2 LINE L1 0 6566 6001 4 877 1530 168 77 3 chr17 38288141 38288464 -56984187 - MurERV4-int LTR ERVK -1399 3861 3515 4 877 390 231 233 20 chr17 38288474 38288624 -56984027 + RLTR12B LTR ERVK 1 182 -346 4 877 26 50 0 0 chr17 38288626 38288666 -56983985 + AT_rich Low_complexity Low_complexity 1 40 0 4 877 5374 130 20 3 chr17 38288667 38289514 -56983137 - Lx3A LINE L1 -7 6974 6114 4 877 1215 139 23 5 chr17 38289515 38289731 -56982920 + Lx3B LINE L1 5890 6109 -864 4 877 1114 240 59 31 chr17 38289734 38290056 -56982595 + RLTR12B LTR ERVK 180 510 -18 4 877 10497 196 33 10 chr17 38290059 38292155 -56980496 - MurERV4-int LTR ERVK -1752 3508 1365 4 877 2544 239 2 8 chr17 38292155 38292674 -56979977 + RMER20A LTR ERVK 1 516 0 4 877 5826 199 29 13 chr17 38292675 38293845 -56978806 - MurERV4-int LTR ERVK -3891 1369 181 4 877 17643 166 20 5 chr17 38293849 38297691 -56974960 + L1VL4 LINE L1 511 4413 -1470 4 877 691 140 63 58 chr17 38297661 38297835 -56974816 + L1_Mus3 LINE L1 6458 6632 -6 4 877 537 261 30 104 chr17 38298145 38298346 -56974305 + RLTR28B LTR ERVL 1 186 -295 4 877 3785 71 0 32 chr17 38298672 38299170 -56973481 - LTRIS_Mm LTR ERV1 0 482 1 4 877 381 22 0 0 chr17 38299280 38299326 -56973325 + (CAA)n Simple_repeat Simple_repeat 2 47 0 4 877 191 299 78 0 chr17 38299343 38299420 -56973231 - MER5A DNA MER1_type -75 114 32 4 877 25885 30 0 3 chr17 38299514 38302698 -56969953 - L1_Mm LINE L1 -1425 4458 1286 4 877 3263 44 0 0 chr17 38302696 38303105 -56969546 + L1Md_T LINE L1 4212 4620 -1263 4 877 7544 42 0 0 chr17 38303105 38304015 -56968636 + L1Md_T LINE L1 5673 6582 0 4 877 542 340 20 7 chr17 38304024 38304175 -56968476 + B3A SINE B2 1 153 -45 4 877 1091 237 11 0 chr17 38304837 38305107 -56967544 + Lx2 LINE L1 6723 6995 -2 4 877 23 0 0 0 chr17 38305199 38305222 -56967429 + AT_rich Low_complexity Low_complexity 1 23 0 4 877 3069 166 35 7 chr17 38305439 38305538 -56967113 - RLTR20B2 LTR ERVK 0 560 465 4 877 414 0 0 0 chr17 38305538 38305584 -56967067 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 877 531 0 0 0 chr17 38305584 38305643 -56967008 + (GA)n Simple_repeat Simple_repeat 1 59 0 4 877 3069 166 35 7 chr17 38305643 38306087 -56966564 - RLTR20B2 LTR ERVK -96 464 4 4 877 352 354 1 50 chr17 38306631 38306799 -56965852 + ID_B1 SINE B4 5 163 -129 4 877 277 254 0 0 chr17 38307007 38307066 -56965585 + GA-rich Low_complexity Low_complexity 1 59 0 4 877 279 0 0 0 chr17 38307349 38307380 -56965271 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 4 877 735 263 16 37 chr17 38309136 38309381 -56963270 - Lx6 LINE L1 -1411 6049 5810 4 877 436 229 23 8 chr17 38309380 38309512 -56963139 + Lx6 LINE L1 7145 7278 -182 4 877 1313 180 30 85 chr17 38309527 38309891 -56962760 - RLTR21 LTR ERVK -494 1078 735 4 877 252 185 0 0 chr17 38309984 38310038 -56962613 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 877 876 289 5 0 chr17 38310185 38310379 -56962272 + B3 SINE B2 1 195 -21 4 877 442 367 7 7 chr17 38311588 38311736 -56960915 - B4A SINE B4 0 292 145 4 877 35 32 0 31 chr17 38313538 38313562 -56959089 + AT_rich Low_complexity Low_complexity 1 24 0 4 877 955 95 73 0 chr17 38313562 38313699 -56958952 - B1_Mus2 SINE Alu 0 147 1 4 877 35 32 0 31 chr17 38313699 38313738 -56958913 + AT_rich Low_complexity Low_complexity 1 38 0 4 877 1044 200 138 30 chr17 38314166 38314470 -56958181 - MurERV4-int LTR ERVK -1405 3855 3519 4 877 1089 235 157 72 chr17 38314483 38314755 -56957896 + RLTR12B LTR ERVK 1 280 -248 4 877 510 17 0 0 chr17 38314755 38314814 -56957837 + (GA)n Simple_repeat Simple_repeat 1 59 0 4 877 1089 235 157 72 chr17 38314814 38315000 -56957651 + RLTR12B LTR ERVK 281 497 -31 4 877 6279 185 35 7 chr17 38315023 38316225 -56956426 - MurERV4-int LTR ERVK -1749 3511 2276 4 877 2108 230 37 0 chr17 38316230 38316660 -56955991 + RMER20A LTR ERVK 71 516 0 4 877 6795 196 31 5 chr17 38316660 38317981 -56954670 - MurERV4-int LTR ERVK -3890 1370 16 4 877 2057 202 13 21 chr17 38317983 38318453 -56954198 - RMER4A LTR ERVK 0 466 1 4 877 486 327 45 0 chr17 38318644 38318843 -56953808 - ID_B1 SINE B4 -16 208 1 4 877 567 0 0 0 chr17 38319498 38319561 -56953090 + (CAGAG)n Simple_repeat Simple_repeat 3 65 0 4 877 2614 202 22 14 chr17 38320316 38320819 -56951832 + L1VL4 LINE L1 99 605 -5697 4 877 7683 97 2 5 chr17 38320846 38322687 -56949964 - L1_Mus1 LINE L1 -1 6566 4732 4 877 35052 65 1 17 chr17 38322692 38328760 -56943891 - L1Md_F2 LINE L1 0 6582 626 4 877 4856 99 6 4 chr17 38328760 38329473 -56943178 - RLTR22_Mus LTR ERVK -1094 714 1 4 877 1541 221 37 24 chr17 38329473 38329511 -56943140 - RMER12 LTR ERVK -520 802 767 4 877 342 67 0 0 chr17 38329511 38329556 -56943095 + (TGGA)n Simple_repeat Simple_repeat 1 45 0 4 877 1541 221 37 24 chr17 38329556 38329891 -56942760 - RMER12 LTR ERVK -556 766 424 4 877 507 107 0 0 chr17 38329892 38329967 -56942684 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 4 877 835 64 0 9 chr17 38329984 38330095 -56942556 - B1_Mm SINE Alu 0 147 38 4 877 1448 259 47 24 chr17 38330096 38330520 -56942131 - RMER12 LTR ERVK -888 434 1 4 877 542 354 11 33 chr17 38330851 38331035 -56941616 + B3A SINE B2 8 187 -11 4 877 7336 201 42 76 chr17 38332347 38335018 -56937633 - Lx2B LINE L1 -12 6988 4420 4 877 5258 48 1 3 chr17 38335018 38335669 -56936982 - L1Md_F2 LINE L1 -8 6574 5925 4 877 7336 182 19 115 chr17 38335669 38335953 -56936698 - Lx2B LINE L1 -1458 4419 4125 4 877 867 214 15 5 chr17 38336195 38336392 -56936259 + L1VL4 LINE L1 532 730 -5572 4 877 375 54 0 0 chr17 38336392 38336448 -56936203 + L1_Mus3 LINE L1 6576 6631 -7 4 877 21 89 0 0 chr17 38336489 38336545 -56936106 + AT_rich Low_complexity Low_complexity 1 56 0 4 877 508 183 0 0 chr17 38336546 38336650 -56936001 + L1VL4 LINE L1 729 832 -5470 4 877 4746 92 36 0 chr17 38336651 38337324 -56935327 + L1_Mus1 LINE L1 5870 6566 -1 4 877 7908 184 49 51 chr17 38337494 38338456 -56934195 + L1_Mur1 LINE L1 1174 2065 -3821 4 877 246 32 0 0 chr17 38338456 38338487 -56934164 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 877 7908 184 50 52 chr17 38338487 38339498 -56933153 + L1_Mur1 LINE L1 2066 3142 -2744 4 877 1223 66 0 6 chr17 38339520 38339687 -56932964 + (TCTCC)n Simple_repeat Simple_repeat 1 166 0 4 877 686 0 36 0 chr17 38339688 38339772 -56932879 + (TTTTC)n Simple_repeat Simple_repeat 3 89 0 4 877 5209 143 36 52 chr17 38339803 38340790 -56931861 - Lx3B LINE L1 -5 6968 5997 4 877 878 216 107 13 chr17 38342116 38342341 -56930310 - Lx6 LINE L1 -1405 6055 5810 4 877 834 267 89 15 chr17 38342339 38342609 -56930042 + Lx6 LINE L1 7145 7434 -26 4 877 792 255 47 11 chr17 38343363 38343553 -56929098 + B3 SINE B2 11 207 -9 4 877 489 361 73 11 chr17 38344788 38345060 -56927591 - B4A SINE B4 0 292 4 4 877 506 273 39 47 chr17 38347429 38347556 -56925095 - B3 SINE B2 -90 126 1 4 877 250 308 15 0 chr17 38348210 38348275 -56924376 + Lx8 LINE L1 7171 7236 -237 4 877 180 152 0 0 chr17 38348317 38348350 -56924301 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 877 751 278 30 30 chr17 38348351 38348585 -56924066 + Lx8 LINE L1 6200 6433 -1040 4 877 353 250 12 0 chr17 38348588 38348672 -56923979 + Lx8 LINE L1 6564 6648 -825 4 877 197 83 28 0 chr17 38348682 38348718 -56923933 + (TC)n Simple_repeat Simple_repeat 1 37 0 4 877 202 309 15 0 chr17 38348719 38348787 -56923864 + CT-rich Low_complexity Low_complexity 3 71 0 4 877 1752 130 17 0 chr17 38349222 38349514 -56923137 + L1_Mur2 LINE L1 4171 4467 -1410 4 877 210 171 0 0 chr17 38349886 38349927 -56922724 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 4 877 450 289 31 0 chr17 38349927 38350055 -56922596 - B1_Mur1 SINE Alu -6 143 12 4 877 1563 187 54 68 chr17 38350090 38350123 -56922528 + ORR1B1 LTR MaLR 3 32 -346 4 877 3333 174 16 2 chr17 38350123 38350698 -56921953 + Lx2A1 LINE L1 6426 7008 0 4 877 1563 187 54 68 chr17 38350698 38350711 -56921940 + ORR1B1 LTR MaLR 33 33 -345 4 877 594 75 0 0 chr17 38350711 38350791 -56921860 + (GGAA)n Simple_repeat Simple_repeat 4 83 0 4 877 1798 141 98 12 chr17 38350791 38351123 -56921528 + ORR1B1 LTR MaLR 34 394 0 4 877 383 272 172 6 chr17 38351123 38351297 -56921354 - MER2 DNA MER2_type -140 205 3 5 877 265 172 15 15 chr17 38351411 38351476 -56921175 + (TA)n Simple_repeat Simple_repeat 1 65 0 5 877 6762 100 4 2 chr17 38351676 38352618 -56920033 - L1_Mus2 LINE L1 0 6566 5623 5 877 10697 137 14 1 chr17 38352608 38354396 -56918255 - L1_Mm LINE L1 -1746 4137 2326 5 877 590 277 81 10 chr17 38354403 38354600 -56918051 - B3 SINE B2 -4 212 2 5 877 343 229 0 168 chr17 38354971 38355102 -56917549 - RMER1C Other Other -126 1216 1108 5 877 490 357 18 18 chr17 38354991 38355219 -56917432 - Lx8 LINE L1 -144 7329 7102 5 877 414 0 0 0 chr17 38355232 38355278 -56917373 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 877 8324 151 13 15 chr17 38355500 38356777 -56915874 + L1VL2 LINE L1 65 1334 -2281 5 877 450 0 0 0 chr17 38356777 38356827 -56915824 + (CAA)n Simple_repeat Simple_repeat 2 51 0 5 877 8324 115 16 4 chr17 38356827 38357776 -56914875 + L1VL2 LINE L1 1335 2298 -1317 5 877 21699 89 18 2 chr17 38357777 38359537 -56913114 + L1Md_F2 LINE L1 189 1977 -3906 5 877 271 0 51 0 chr17 38359537 38359576 -56913075 + (CAA)n Simple_repeat Simple_repeat 2 42 0 5 877 21699 101 3 4 chr17 38359576 38362018 -56910633 + L1Md_F2 LINE L1 1978 4415 -1468 5 877 37135 21 3 7 chr17 38362019 38367388 -56905263 + L1Md_A LINE L1 244 5586 -297 5 877 8717 18 0 0 chr17 38367388 38368384 -56904267 + L1Md_A LINE L1 5587 6582 0 5 877 8690 82 2 4 chr17 38368385 38369569 -56903082 + L1Md_F2 LINE L1 4406 5586 -297 5 877 7485 70 5 0 chr17 38369569 38370548 -56902103 + L1Md_F2 LINE L1 5587 6570 -12 5 877 11569 159 31 38 chr17 38370549 38371087 -56901564 + L1_Mur1 LINE L1 2594 3053 -2833 5 877 905 0 9 0 chr17 38371087 38371192 -56901459 + (GAA)n Simple_repeat Simple_repeat 1 106 0 5 877 11569 159 31 38 chr17 38371192 38372980 -56899671 + L1_Mur1 LINE L1 3054 4903 -983 5 877 2035 190 0 3 chr17 38372985 38373339 -56899312 + L1_Mm LINE L1 5322 5674 -209 5 877 1817 142 32 6 chr17 38373340 38373653 -56898998 + RLTR13C1 LTR ERVK 663 983 0 5 877 3800 130 24 45 chr17 38373653 38374316 -56898335 + Lx LINE L1 6004 6652 -2 5 877 219 152 0 0 chr17 38374445 38374491 -56898160 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 877 1163 305 77 26 chr17 38374527 38374992 -56897659 - Lx6 LINE L1 -26 7434 6946 5 877 468 316 38 0 chr17 38375028 38375223 -56897428 - Lx6 LINE L1 -739 6311 6083 5 877 1731 186 75 0 chr17 38375223 38375541 -56897110 - ORR1B1 LTR MaLR -52 342 1 5 877 903 198 30 1 chr17 38375541 38375787 -56896864 - Lx6 LINE L1 -1415 6045 5778 5 877 8721 60 10 3 chr17 38375779 38377614 -56895037 - L1Md_F2 LINE L1 -3 6579 4732 5 877 35266 73 3 12 chr17 38377640 38383808 -56888843 - L1Md_F2 LINE L1 -2 6580 476 5 877 23882 96 7 1 chr17 38383809 38388138 -56884513 - L1Md_F2 LINE L1 -1138 4745 392 5 877 8813 172 26 97 chr17 38388150 38389474 -56883177 - Lx6 LINE L1 -96 5781 4472 5 877 567 0 0 0 chr17 38389474 38389537 -56883114 + (TTTA)n Simple_repeat Simple_repeat 3 65 0 5 877 956 131 13 0 chr17 38389537 38389690 -56882961 - B2_Mm2 SINE B2 -40 155 1 5 877 8813 172 26 97 chr17 38389690 38390107 -56882544 - Lx6 LINE L1 -1406 4471 4037 5 877 471 35 0 0 chr17 38390107 38390164 -56882487 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 877 8813 172 26 97 chr17 38390164 38390396 -56882255 - Lx6 LINE L1 -1841 4036 3804 5 877 6575 101 23 13 chr17 38390409 38391475 -56881176 - L1_Mus1 LINE L1 -1 6566 5494 5 877 11543 165 33 34 chr17 38391474 38394096 -56878555 - Lx6 LINE L1 -2077 3800 1188 5 877 10536 14 0 0 chr17 38394101 38396003 -56876648 - L1Md_A LINE L1 0 6582 4681 5 877 1808 251 49 97 chr17 38396021 38396740 -56875911 - Lx6 LINE L1 -5908 1178 495 5 877 3206 249 26 16 chr17 38396843 38397611 -56875040 - Lx6 LINE L1 -180 7280 6505 5 877 342 0 0 0 chr17 38399366 38399404 -56873247 + (TC)n Simple_repeat Simple_repeat 1 38 0 5 877 414 0 0 0 chr17 38399404 38399449 -56873202 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 877 764 327 32 18 chr17 38399484 38399767 -56872884 - B4 SINE B4 -4 288 2 5 877 566 310 17 2 chr17 38401054 38401330 -56871321 - L1M2 LINE L1 -1332 4811 4529 5 877 205 367 0 0 chr17 38401382 38401461 -56871190 + (TG)n Simple_repeat Simple_repeat 2 80 0 5 877 801 114 0 0 chr17 38401753 38401876 -56870775 + (TA)n Simple_repeat Simple_repeat 1 123 0 5 877 464 309 60 34 chr17 38402178 38402714 -56869937 - L1M2 LINE L1 -1814 4329 3777 5 877 5561 49 88 3 chr17 38403026 38403765 -56868886 - L1Md_F3 LINE L1 0 6584 5783 5 109 7684 32 0 3 chr17 38403823 38404738 -56867913 - L1Md_F3 LINE L1 -2 6582 5671 5 878 2945 26 42 3 chr17 38404738 38405091 -56867560 + IAPLTR1_Mm LTR ERVK 1 367 0 5 878 3416 80 32 14 chr17 38405091 38405805 -56866846 + IAPEz-int LTR ERVK 8 662 -5819 5 878 433 82 0 32 chr17 38405805 38405868 -56866783 + IAPEz-int LTR ERVK 1359 1419 -5062 5 878 1763 123 4 15 chr17 38405857 38406122 -56866529 + IAPEz-int LTR ERVK 2236 2497 -5183 5 878 914 81 24 0 chr17 38406119 38406242 -56866409 + IAPEz-int LTR ERVK 4785 4910 -2770 5 878 26228 17 1 0 chr17 38406242 38409192 -56863459 + IAPEz-int LTR ERVK 3525 6478 -3 5 878 2932 28 42 3 chr17 38409196 38409549 -56863102 + IAPLTR1_Mm LTR ERVK 1 367 0 5 878 346 303 84 17 chr17 38409591 38409769 -56862882 + L1M2 LINE L1 3089 3278 -2865 5 878 581 338 63 29 chr17 38409826 38410268 -56862383 - L1M2 LINE L1 -2925 3218 2762 5 878 659 254 0 0 chr17 38410283 38410417 -56862234 + B1_Mus1 SINE Alu 2 135 -13 5 878 183 72 23 45 chr17 38410523 38410567 -56862084 + (TTTG)n Simple_repeat Simple_repeat 1 43 0 5 878 207 0 0 0 chr17 38410833 38410856 -56861795 + (TTGG)n Simple_repeat Simple_repeat 2 24 0 5 878 318 340 20 25 chr17 38411328 38411524 -56861127 - B3A SINE B2 -3 195 1 5 878 462 18 0 0 chr17 38411524 38411579 -56861072 + (CAA)n Simple_repeat Simple_repeat 1 55 0 5 878 225 228 17 34 chr17 38412963 38413022 -56859629 + RLTR13B4 LTR ERVK 232 289 -514 5 878 404 322 77 36 chr17 38413502 38413686 -56858965 + L1M2 LINE L1 2368 2545 -4304 5 878 278 26 0 25 chr17 38413686 38413726 -56858925 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 878 404 322 77 36 chr17 38413726 38413815 -56858836 + L1M2 LINE L1 2546 2652 -4197 5 878 2076 204 70 35 chr17 38413857 38414339 -56858312 - RLTR19 LTR ERVK 0 499 1 5 878 356 277 18 98 chr17 38414367 38414479 -56858172 + PB1D10 SINE Alu 3 105 -12 5 878 186 43 0 0 chr17 38414479 38414502 -56858149 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 5 878 261 272 86 109 chr17 38414502 38414517 -56858134 + PB1 SINE Alu 117 127 0 5 878 318 253 11 57 chr17 38414569 38414657 -56857994 + B4 SINE B4 2 85 -207 5 878 430 105 37 73 chr17 38414797 38414879 -56857772 - RLTR9A2 LTR ERVK -97 286 208 5 878 26 30 0 0 chr17 38414882 38414915 -56857736 + AT_rich Low_complexity Low_complexity 1 33 0 5 878 1125 88 0 0 chr17 38414960 38415107 -56857544 - B1_Mm SINE Alu 0 147 1 5 878 556 180 130 8 chr17 38415391 38415514 -56857137 + MTD LTR MaLR 1 138 -281 5 878 2583 208 93 30 chr17 38415514 38416119 -56856532 + RLTR21 LTR ERVK 1 643 -929 5 878 402 21 0 0 chr17 38416160 38416207 -56856444 + (TATG)n Simple_repeat Simple_repeat 3 49 0 5 878 31 26 0 0 chr17 38416356 38416394 -56856257 + AT_rich Low_complexity Low_complexity 1 38 0 5 878 277 270 26 20 chr17 38416500 38416651 -56856000 + L1M2 LINE L1 3070 3221 -3624 5 878 408 324 52 18 chr17 38416693 38416979 -56855672 + L1M2 LINE L1 5592 5887 -958 5 878 21 57 0 0 chr17 38417307 38417342 -56855309 + AT_rich Low_complexity Low_complexity 1 35 0 5 878 351 0 0 0 chr17 38417525 38417564 -56855087 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 878 432 0 0 0 chr17 38417564 38417611 -56855040 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 878 273 229 73 37 chr17 38417854 38417963 -56854688 + MER57A-int LTR ERV1 5842 5954 -233 5 878 3386 90 9 0 chr17 38418499 38418964 -56853687 + L1_Mus1 LINE L1 6099 6567 0 5 878 1724 128 0 11 chr17 38421426 38421687 -56850964 - RLTR22_Mur LTR ERVK 0 1848 1591 5 878 555 207 18 9 chr17 38421816 38421928 -56850723 - RLTR22_Mur LTR ERVK -1721 127 15 5 878 330 329 58 32 chr17 38422218 38422372 -56850279 + RSINE1 SINE B4 6 163 -2 5 878 516 16 0 0 chr17 38422377 38422438 -56850213 + (CATA)n Simple_repeat Simple_repeat 2 62 0 5 878 33 25 0 0 chr17 38422462 38422502 -56850149 + AT_rich Low_complexity Low_complexity 1 40 0 5 878 814 84 50 0 chr17 38422544 38422663 -56849988 - Lx3C LINE L1 -1069 5907 5783 5 878 5615 109 125 1 chr17 38422699 38423667 -56848984 - L1_Mus3 LINE L1 -2 6636 5538 5 878 29467 56 2 15 chr17 38423672 38424520 -56848131 - L1Md_F2 LINE L1 -13 6569 5734 5 878 2684 61 6 28 chr17 38424520 38424873 -56847778 - IAPLTR4 LTR ERVK 0 345 1 5 878 29467 62 3 8 chr17 38424873 38428618 -56844033 - L1Md_F2 LINE L1 -150 5733 2001 5 878 32762 61 6 3 chr17 38428636 38429971 -56842680 - L1Md_F2 LINE L1 0 6582 5248 5 878 230 56 28 0 chr17 38429971 38430007 -56842644 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 878 32762 87 18 9 chr17 38430007 38434894 -56837757 - L1Md_F2 LINE L1 -636 5247 311 5 878 7019 146 45 23 chr17 38434890 38435203 -56837448 - L1_Mm LINE L1 -322 5561 5245 5 878 576 0 0 0 chr17 38435203 38435267 -56837384 + (TA)n Simple_repeat Simple_repeat 2 65 0 5 878 7019 146 45 23 chr17 38435267 38435989 -56836662 - L1_Mm LINE L1 -639 5244 4535 5 878 1152 88 0 0 chr17 38435989 38436136 -56836515 - B1_Mus1 SINE Alu 0 148 2 5 878 7019 146 45 23 chr17 38436136 38436382 -56836269 - L1_Mm LINE L1 -1349 4534 4251 5 878 420 20 0 0 chr17 38436587 38436636 -56836015 + (TC)n Simple_repeat Simple_repeat 2 50 0 5 878 684 225 113 71 chr17 38436844 38437083 -56835568 + RMER13B LTR ERVK 546 794 -114 5 878 686 112 0 61 chr17 38437159 38437273 -56835378 + RMER2 LTR ERV1 461 567 0 5 878 2846 128 74 4 chr17 38437348 38437810 -56834841 - Lx LINE L1 -5 6649 6156 5 878 1226 228 121 6 chr17 38438216 38438334 -56834317 - ORR1C1 LTR MaLR 0 378 230 5 878 222 37 0 0 chr17 38438334 38438361 -56834290 + (CAGG)n Simple_repeat Simple_repeat 4 30 0 5 878 1226 228 121 6 chr17 38438361 38438581 -56834070 - ORR1C1 LTR MaLR -149 229 1 5 878 25 0 0 0 chr17 38438899 38438924 -56833727 + AT_rich Low_complexity Low_complexity 1 25 0 5 878 1563 210 63 68 chr17 38439302 38439731 -56832920 - RMER5 LTR ERV1 -4 530 104 5 878 368 301 63 70 chr17 38439803 38439841 -56832810 + B4A SINE B4 149 185 -107 5 878 486 0 0 0 chr17 38439841 38439895 -56832756 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 878 368 301 63 70 chr17 38439895 38439999 -56832652 + B4A SINE B4 186 289 -3 5 878 251 235 14 29 chr17 38440273 38440343 -56832308 + L1M5 LINE L1 4554 4622 -1524 5 878 418 65 52 0 chr17 38440518 38440595 -56832056 + (TCTG)n Simple_repeat Simple_repeat 4 84 0 5 878 28 0 0 0 chr17 38440741 38440769 -56831882 + AT_rich Low_complexity Low_complexity 1 28 0 5 878 203 179 0 0 chr17 38442494 38442533 -56830118 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 878 48 18 0 0 chr17 38442593 38442648 -56830003 + AT_rich Low_complexity Low_complexity 1 55 0 5 878 244 361 49 25 chr17 38442735 38442979 -56829672 + L1MC4 LINE L1 7220 7469 -573 5 878 211 40 0 0 chr17 38444867 38444892 -56827759 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 5 878 369 93 0 0 chr17 38444892 38444946 -56827705 + (CCTA)n Simple_repeat Simple_repeat 2 55 0 5 878 1049 76 83 0 chr17 38444946 38445103 -56827548 - B2_Mm2 SINE B2 -18 177 8 5 878 21 0 0 0 chr17 38445298 38445319 -56827332 + AT_rich Low_complexity Low_complexity 1 21 0 5 878 23 33 0 0 chr17 38445360 38445390 -56827261 + AT_rich Low_complexity Low_complexity 1 30 0 5 878 27 29 0 0 chr17 38446314 38446348 -56826303 + AT_rich Low_complexity Low_complexity 1 34 0 5 878 1768 208 16 11 chr17 38446464 38446843 -56825808 - L1_Mur2 LINE L1 -833 5044 4664 6 878 6838 87 6 2 chr17 38446847 38447780 -56824871 - L1_Mus1 LINE L1 0 6567 5631 6 878 3278 72 61 4 chr17 38447814 38448275 -56824376 - RLTR1C LTR ERV1 -16 487 1 6 878 455 224 12 0 chr17 38448275 38448359 -56824292 - RMER20B LTR ERVK -542 85 1 6 878 229 321 0 45 chr17 38448604 38448692 -56823959 + L1M5 LINE L1 4553 4636 -1510 6 878 257 280 93 0 chr17 38448795 38448902 -56823749 + Lx5 LINE L1 6934 7050 0 6 878 327 85 0 0 chr17 38449089 38449136 -56823515 + (TA)n Simple_repeat Simple_repeat 2 48 0 6 878 362 115 300 58 chr17 38449424 38449544 -56823107 - B2_Mm2 SINE B2 0 195 47 6 878 1178 124 11 0 chr17 38449576 38449753 -56822898 - B2_Mm1t SINE B2 -14 179 1 6 878 1733 226 99 44 chr17 38450679 38451175 -56821476 + RLTR11A2 LTR ERVK 1 523 -4 6 878 1948 118 16 10 chr17 38451536 38451843 -56820808 - RLTR27 LTR ERVK 0 309 1 6 878 1268 239 30 4 chr17 38452072 38452341 -56820310 - ORR1B1-int LTR MaLR -423 1086 811 6 878 1532 160 86 0 chr17 38452336 38452604 -56820047 - ORR1B1 LTR MaLR -103 291 1 6 878 1137 327 28 22 chr17 38452604 38453064 -56819587 - Lx9 LINE L1 -687 6957 6495 6 878 611 266 8 0 chr17 38453097 38453221 -56819430 - B1_Mur1 SINE Alu -5 144 20 6 878 34 65 0 0 chr17 38453339 38453401 -56819250 + AT_rich Low_complexity Low_complexity 1 62 0 6 878 477 365 81 37 chr17 38453417 38453591 -56819060 + L1MB7 LINE L1 5595 5768 -416 6 878 733 291 17 0 chr17 38453591 38453770 -56818881 + B3A SINE B2 1 182 -16 6 878 477 365 81 37 chr17 38453770 38454112 -56818539 + L1MB7 LINE L1 5769 6133 -51 6 878 411 257 29 19 chr17 38454117 38454289 -56818362 + B3 SINE B2 1 216 0 6 878 807 169 0 0 chr17 38454683 38454831 -56817820 + (TA)n Simple_repeat Simple_repeat 2 149 0 6 878 257 217 16 32 chr17 38456090 38456152 -56816499 + ERVL-E-int LTR ERVL 2679 2739 -2928 6 878 2859 44 0 3 chr17 38456172 38456517 -56816134 - L1Md_F2 LINE L1 -14 6568 6225 6 878 24 0 0 0 chr17 38456613 38456637 -56816014 + AT_rich Low_complexity Low_complexity 1 24 0 6 878 525 236 178 26 chr17 38456692 38456910 -56815741 - ORR1D1 LTR MaLR -25 349 108 6 878 1031 223 29 10 chr17 38457492 38457700 -56814951 - Lx9 LINE L1 -788 6856 6645 6 878 21 0 0 0 chr17 38457843 38457864 -56814787 + AT_rich Low_complexity Low_complexity 1 21 0 6 878 681 129 41 10 chr17 38458139 38458265 -56814386 - RLTR13B4 LTR ERVK -803 126 3 6 878 1354 156 24 54 chr17 38458286 38458619 -56814032 - L1_Mur2 LINE L1 -2678 3199 2877 6 878 1428 104 0 9 chr17 38458619 38458832 -56813819 - L1Md_F2 LINE L1 -12 6570 6360 6 878 852 45 0 0 chr17 38458832 38458942 -56813709 + L1_Mm LINE L1 4994 5103 -780 6 878 5281 182 19 14 chr17 38458941 38459768 -56812883 - L1_Mur2 LINE L1 -2990 2887 2052 6 878 360 43 0 0 chr17 38459768 38459814 -56812837 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 878 5281 182 19 14 chr17 38459814 38460126 -56812525 - L1_Mur2 LINE L1 -3826 2051 1743 6 878 2872 73 0 0 chr17 38460126 38460483 -56812168 - IAPEY2_LTR LTR ERVK 0 357 1 6 878 2812 153 18 49 chr17 38460483 38461140 -56811511 - MMERVK10C-int LTR ERVK 0 7581 6971 6 878 181 373 45 0 chr17 38461142 38461252 -56811399 - L3b LINE CR1 -33 449 335 6 878 3447 83 9 0 chr17 38461267 38461715 -56810936 - IAPEY3-int LTR ERVK -4991 2689 2238 6 878 8873 133 13 43 chr17 38461692 38461752 -56810899 - IAPEY3-int LTR ERVK -5698 1982 1928 6 878 3385 25 5 0 chr17 38461752 38462146 -56810505 - MTA_Mm LTR MaLR 0 396 1 6 878 8873 133 13 43 chr17 38462146 38463589 -56809062 - IAPEY3-int LTR ERVK -5753 1927 524 6 878 715 210 32 6 chr17 38463589 38463747 -56808904 - IAPEY3-int LTR ERVK -7518 162 1 6 878 2962 56 0 0 chr17 38463747 38464104 -56808547 - IAPEY2_LTR LTR ERVK 0 357 1 6 878 3056 174 25 29 chr17 38464104 38464955 -56807696 - L1_Mur2 LINE L1 -4130 1747 883 6 878 297 0 0 0 chr17 38464955 38464988 -56807663 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 878 3056 228 38 66 chr17 38464988 38465446 -56807205 - L1_Mur2 LINE L1 -6204 882 458 6 878 2883 240 76 15 chr17 38465499 38466234 -56806417 - Lx6 LINE L1 -176 7284 6505 6 878 1047 116 0 0 chr17 38466447 38466594 -56806057 + B1_Mm SINE Alu 1 147 0 6 878 693 326 39 25 chr17 38467993 38468276 -56804375 - B4 SINE B4 -4 288 2 6 878 316 292 91 65 chr17 38469321 38469552 -56803099 - L1MC2 LINE L1 -323 6021 5785 6 878 726 311 34 16 chr17 38469552 38469937 -56802714 - L1M2 LINE L1 -1327 4816 4425 6 878 261 253 20 32 chr17 38469939 38470041 -56802610 - L1M2 LINE L1 -2286 3857 3731 6 878 261 314 65 36 chr17 38470337 38470723 -56801928 - L1M2 LINE L1 -2994 3149 2753 6 878 598 263 8 0 chr17 38470726 38470859 -56801792 + B1_Mus1 SINE Alu 2 135 -13 6 878 234 215 31 0 chr17 38471306 38471371 -56801280 - L1M5 LINE L1 -3946 2200 2134 6 878 313 345 20 25 chr17 38471755 38471954 -56800697 - B3A SINE B2 0 198 1 6 878 299 318 52 50 chr17 38473725 38473909 -56798742 - ORR1E LTR MaLR -185 189 1 6 878 248 311 28 40 chr17 38473909 38474213 -56798438 + L1MEg LINE L1 2159 2669 -4180 6 878 439 189 0 0 chr17 38474249 38474323 -56798328 - RLTR19 LTR ERVK 0 499 426 6 878 225 250 0 0 chr17 38474326 38474374 -56798277 - RLTR19 LTR ERVK -198 298 251 6 878 1959 206 26 3 chr17 38474376 38474760 -56797891 - Lx4B LINE L1 -536 6522 6130 6 878 3553 173 16 45 chr17 38474763 38475489 -56797162 - ETnERV2-int LTR ERVK -4981 2425 1721 6 878 2149 165 149 39 chr17 38475491 38476002 -56796649 - ETnERV2-int LTR ERVK -4587 819 253 6 878 236 91 23 0 chr17 38476254 38476298 -56796353 + (TTTTA)n Simple_repeat Simple_repeat 1 45 0 6 878 285 262 0 24 chr17 38476346 38476428 -56796223 - ETnERV2-int LTR ERVK -7948 269 190 6 878 433 247 19 52 chr17 38476793 38476947 -56795704 - RLTR43A LTR ERVK 0 364 216 6 878 1394 224 9 14 chr17 38477133 38477173 -56795478 - L1_Mur2 LINE L1 -802 5075 5036 6 878 1700 189 43 43 chr17 38477173 38477571 -56795080 - RMER10B LTR ERVL 0 398 1 6 878 1394 241 33 15 chr17 38477571 38478052 -56794599 - L1_Mur2 LINE L1 -844 5036 4524 6 878 1621 214 77 26 chr17 38478819 38479236 -56793415 + BGLII_B LTR ERVK 2 439 -2 6 878 10394 173 83 21 chr17 38479801 38480434 -56792217 - L1_Mur2 LINE L1 -1348 4529 3853 6 878 278 0 55 55 chr17 38480434 38480489 -56792162 + (TTTG)n Simple_repeat Simple_repeat 3 57 0 6 878 10394 173 83 21 chr17 38480489 38482174 -56790477 - L1_Mur2 LINE L1 -2025 3852 2057 6 878 180 0 0 0 chr17 38482174 38482194 -56790457 + (TTTG)n Simple_repeat Simple_repeat 4 23 0 6 878 273 57 0 0 chr17 38482201 38482236 -56790415 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 878 10394 173 83 21 chr17 38482236 38482281 -56790370 - L1_Mur2 LINE L1 -3827 2050 2010 6 878 1845 120 46 22 chr17 38482280 38482603 -56790048 + L1_Mur2 LINE L1 3779 4109 -1768 6 878 2761 190 58 52 chr17 38482638 38483007 -56789644 + RLTR21 LTR ERVK 1 373 -1199 6 878 1015 109 0 7 chr17 38483007 38483155 -56789496 + B1_Mm SINE Alu 1 147 0 6 878 2761 190 58 52 chr17 38483155 38483232 -56789419 + RLTR21 LTR ERVK 374 428 -1144 6 878 189 0 0 0 chr17 38483232 38483253 -56789398 + (TA)n Simple_repeat Simple_repeat 2 22 0 6 878 2761 190 58 52 chr17 38483253 38483388 -56789263 + RLTR21 LTR ERVK 429 586 -986 6 878 1136 111 0 0 chr17 38483390 38483562 -56789089 - L1_Mus1 LINE L1 0 6567 6396 6 878 2769 57 0 0 chr17 38483562 38483894 -56788757 + IAPEY3_LTR LTR ERVK 1 332 0 6 878 8645 104 16 31 chr17 38483894 38485224 -56787427 + IAPEY3-int LTR ERVK 1 1311 -6369 6 878 335 78 0 56 chr17 38485225 38485279 -56787372 + IAPLTR4 LTR ERVK 1 51 -294 6 878 11414 38 26 6 chr17 38485279 38486681 -56785970 + IAPLTR4_I LTR ERVK 41 1470 0 6 878 356 179 0 93 chr17 38486681 38486777 -56785874 + MMERVK10C-int LTR ERVK 869 952 -6629 6 878 1135 198 94 97 chr17 38486890 38487392 -56785259 + RMER16-int LTR ERVK 251 819 -4587 6 878 439 230 88 0 chr17 38487397 38487510 -56785141 + RMER16-int LTR ERVK 938 1060 -5077 6 878 254 279 0 95 chr17 38487523 38487618 -56785033 + ETnERV3-int LTR ERVK 2454 2539 -4867 6 878 6622 111 67 11 chr17 38487630 38489007 -56783644 + ETnERV3-int LTR ERVK 2735 4271 -3135 6 878 470 198 11 35 chr17 38489010 38489144 -56783507 + IAPLTR3-int LTR ERVK 2357 2464 -2380 6 878 833 81 35 49 chr17 38489149 38489292 -56783359 + MMERVK10C-int LTR ERVK 4530 4670 -2911 6 878 6058 249 56 42 chr17 38489401 38491916 -56780735 + IAPLTR3-int LTR ERVK 3468 7297 -383 6 878 1284 144 47 24 chr17 38491916 38492198 -56780453 + IAPLTR4 LTR ERVK 1 339 -28 6 878 2373 39 11 0 chr17 38492210 38492491 -56780160 + IAPLTR4_I LTR ERVK 789 1072 -398 6 878 50467 59 12 3 chr17 38492489 38498808 -56773843 + IAPEY3-int LTR ERVK 1305 7680 0 6 878 2745 48 0 0 chr17 38498808 38499140 -56773511 + IAPEY3_LTR LTR ERVK 1 332 0 6 878 5969 87 9 1 chr17 38499140 38499948 -56772703 - L1_Mus1 LINE L1 -166 6401 5588 6 878 234 128 0 0 chr17 38499961 38500000 -56772651 + RLTR21 LTR ERVK 563 601 -971 6 878 2383 217 68 57 chr17 38500000 38500976 -56771675 + RLTR21 LTR ERVK 602 1306 -266 1 878 22 0 0 0 chr17 38500976 38500998 -56771653 + AT_rich Low_complexity Low_complexity 1 22 0 2 878 365 337 29 25 chr17 38501003 38501277 -56771374 + MurSatRep1 Unknown Unknown 1751 2025 -112 3 878 230 326 22 22 chr17 38501241 38501379 -56771272 + MMSAT4 Satellite Satellite 31 168 0 4 878 511 211 83 113 chr17 38501392 38501687 -56770964 + RLTR25B LTR ERVK 527 952 -76 5 878 1670 57 0 0 chr17 38501759 38501969 -56770682 - L1Md_F3 LINE L1 -14 6570 6361 6 878 342 368 43 37 chr17 38502403 38502564 -56770087 + RSINE1 SINE B4 4 165 0 7 878 2656 84 113 5 chr17 38503538 38503970 -56768681 + RLTR44D LTR ERVK 3 481 -5 8 878 507 33 0 0 chr17 38503989 38504050 -56768601 + (TC)n Simple_repeat Simple_repeat 2 62 0 9 878 1100 89 0 0 chr17 38504055 38504201 -56768450 - B1_Mus2 SINE Alu 0 147 2 1 878 537 44 0 0 chr17 38505001 38505069 -56767582 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 878 768 143 8 8 chr17 38505190 38505317 -56767334 - RMER17C LTR ERVK 0 410 284 1 878 248 171 0 0 chr17 38505383 38505424 -56767227 - ORR1A3-int LTR MaLR 0 1963 1923 1 878 446 61 15 0 chr17 38505441 38505507 -56767144 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 878 336 24 0 0 chr17 38505507 38505547 -56767104 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 878 269 133 150 0 chr17 38505621 38505681 -56766970 - RMER17C-int LTR ERVK -1894 1344 1276 1 878 186 71 0 0 chr17 38506460 38506488 -56766163 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 878 468 167 17 121 chr17 38506582 38506698 -56765953 - RMER17C LTR ERVK 0 410 307 1 878 6078 168 57 9 chr17 38506698 38507850 -56764801 + Lx5 LINE L1 3810 5017 -860 1 878 3290 82 14 7 chr17 38507848 38508426 -56764225 - L1_Mus2 LINE L1 -533 6033 5462 1 878 1164 75 0 0 chr17 38508426 38508572 -56764079 - B1_Mm SINE Alu 0 147 2 1 878 3051 120 8 30 chr17 38508572 38508613 -56764038 - L1_Mus2 LINE L1 -422 5461 5421 1 878 2053 138 3 3 chr17 38508613 38508947 -56763704 + L1_Mus2 LINE L1 6229 6562 -4 2 878 2875 202 130 26 chr17 38508959 38509830 -56762821 + Lx5 LINE L1 5005 5974 -1084 1 878 3004 277 67 3 chr17 38509831 38510730 -56761921 + Lx5 LINE L1 6084 7039 -11 1 878 1125 81 31 0 chr17 38511123 38511284 -56761367 + L1_Mus1 LINE L1 6402 6567 0 2 878 207 0 0 0 chr17 38512362 38512385 -56760266 + (A)n Simple_repeat Simple_repeat 1 23 0 2 878 12388 122 41 14 chr17 38512396 38515157 -56757494 + L1Md_A LINE L1 273 3051 -2832 2 878 354 302 48 18 chr17 38515157 38515322 -56757329 + RLTR20B3 LTR ERVK 205 374 -203 2 878 945 130 0 0 chr17 38515536 38515674 -56756977 + B1_Mus1 SINE Alu 3 140 -8 2 878 222 32 77 46 chr17 38516250 38516315 -56756336 + A-rich Low_complexity Low_complexity 4 70 0 2 878 694 251 32 5 chr17 38517230 38517446 -56755205 - URR1A DNA MER1_type 0 226 5 2 878 241 393 98 0 chr17 38517759 38517922 -56754729 - Lx8 LINE L1 -162 7311 7133 2 878 3520 210 16 9 chr17 38518069 38518842 -56753809 - L1_Mur2 LINE L1 -1175 4702 3925 2 878 2915 233 12 91 chr17 38518851 38518967 -56753684 - L1_Mur2 LINE L1 -3709 2168 2082 2 878 4199 86 3 12 chr17 38518967 38519558 -56753093 - L1_Mus3 LINE L1 -6 6632 6047 3 878 2915 241 44 58 chr17 38519558 38520746 -56751905 - L1_Mur2 LINE L1 -3796 2081 898 2 878 820 283 28 38 chr17 38521270 38521552 -56751099 - MTB_Mm LTR MaLR -131 276 1 3 878 36474 35 1 8 chr17 38521982 38527159 -56745492 + L1Md_A LINE L1 452 5586 -297 3 878 8277 39 0 0 chr17 38527159 38528155 -56744496 + L1Md_T LINE L1 5587 6582 0 3 878 36474 29 1 1 chr17 38528155 38528169 -56744482 + L1Md_A LINE L1 5587 5600 -283 3 878 600 158 0 0 chr17 38528466 38528567 -56744084 + URR1B DNA MER1_type 122 222 -3 3 878 7076 72 6 13 chr17 38530573 38531525 -56741126 - L1Md_F2 LINE L1 -1 6581 5636 3 878 2305 109 3 6 chr17 38531602 38531934 -56740717 + L1_Mur1 LINE L1 5502 5832 -54 3 878 994 61 14 0 chr17 38531984 38532131 -56740520 + (TCTA)n Simple_repeat Simple_repeat 2 150 0 3 878 675 217 17 80 chr17 38532569 38532651 -56740000 - URR1A DNA MER1_type -6 220 147 3 878 526 0 0 0 chr17 38532651 38532715 -56739936 + L1Md_T LINE L1 6517 6580 -2 3 878 675 217 17 80 chr17 38532715 38532807 -56739844 - URR1A DNA MER1_type -80 146 57 3 878 925 333 91 28 chr17 38533196 38534323 -56738328 + L1_Mur3 LINE L1 4145 5343 -537 4 878 417 350 39 30 chr17 38534436 38534669 -56737982 + Lx8 LINE L1 7184 7418 -55 4 109 806 310 40 28 chr17 38534783 38535178 -56737473 + L1_Rod LINE L1 5448 5847 0 4 879 3336 281 91 31 chr17 38535661 38537066 -56735585 - Lx7 LINE L1 -16 7680 6191 4 879 297 0 0 0 chr17 38537066 38537099 -56735552 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 879 3336 281 91 31 chr17 38537099 38537114 -56735537 - Lx7 LINE L1 -1506 6190 6176 4 879 360 176 0 0 chr17 38537118 38537186 -56735465 + (TA)n Simple_repeat Simple_repeat 2 69 0 4 879 270 211 91 13 chr17 38537186 38537263 -56735388 - Lx7 LINE L1 -1508 6188 6106 4 879 2628 43 3 18 chr17 38537333 38537664 -56734987 - IAPLTR3 LTR ERVK 0 326 1 4 879 4476 165 9 1 chr17 38537689 38538476 -56734175 + L1_Mur2 LINE L1 4853 5645 -232 4 879 889 260 102 13 chr17 38538476 38538832 -56733819 - MTC-int LTR MaLR -719 379 1 4 879 1228 269 55 16 chr17 38538832 38539199 -56733452 - MTC LTR MaLR -2 419 39 4 879 441 0 0 0 chr17 38539199 38539248 -56733403 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 879 2989 93 2 2 chr17 38539415 38539815 -56732836 + MTB LTR MaLR 1 400 0 5 879 1315 181 4 24 chr17 38540299 38540554 -56732097 - Lx3B LINE L1 -4 6969 6720 5 879 6930 133 33 53 chr17 38540555 38541904 -56730747 - L1_Mur1 LINE L1 -723 5163 3842 5 879 1867 103 19 0 chr17 38542675 38542946 -56729705 - Lx2 LINE L1 -509 6488 6213 5 879 2040 190 9 9 chr17 38543681 38544116 -56728535 - Lx2 LINE L1 -780 6217 5783 5 879 7862 52 14 6 chr17 38544154 38545547 -56727104 - L1Md_F2 LINE L1 -1 6581 5185 5 879 817 104 0 0 chr17 38545545 38545660 -56726991 + L1Md_F2 LINE L1 5057 5171 -712 5 879 11290 228 118 32 chr17 38545664 38549838 -56722813 - Lx2 LINE L1 -93 5784 1250 5 879 270 0 0 0 chr17 38549838 38549868 -56722783 + (TTTC)n Simple_repeat Simple_repeat 1 30 0 5 879 922 217 57 24 chr17 38549868 38549933 -56722718 - Lx2 LINE L1 -5823 1263 1203 5 879 1081 248 12 50 chr17 38549933 38550273 -56722378 + ORR1A4 LTR MaLR 3 329 0 5 879 922 234 45 30 chr17 38550273 38550639 -56722012 - Lx2 LINE L1 -6475 1253 901 5 879 22 0 0 0 chr17 38551657 38551679 -56720972 + AT_rich Low_complexity Low_complexity 1 22 0 5 879 239 350 23 63 chr17 38552668 38552842 -56719809 + L1MCa LINE L1 353 519 -5989 5 879 342 345 42 7 chr17 38552928 38553071 -56719580 + Lx8 LINE L1 7093 7240 -233 5 879 638 270 54 20 chr17 38553470 38553674 -56718977 + URR1A DNA MER1_type 1 211 -15 6 879 184 291 62 25 chr17 38556424 38556505 -56716146 + L4 LINE RTE 575 658 -1371 6 879 269 217 43 0 chr17 38558306 38558398 -56714253 + (TA)n Simple_repeat Simple_repeat 1 96 0 6 879 279 0 0 0 chr17 38558413 38558444 -56714207 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 879 2542 266 79 39 chr17 38558580 38558769 -56713882 + Lx5 LINE L1 5592 5784 -400 6 879 5288 39 1 5 chr17 38558769 38559415 -56713236 + L1Md_T LINE L1 5939 6582 0 6 879 2542 309 57 91 chr17 38559415 38560745 -56711906 + Lx5 LINE L1 5784 7042 -8 6 879 2911 277 73 10 chr17 38560809 38561720 -56710931 - MTC-int LTR MaLR -288 970 2 6 879 723 337 58 41 chr17 38561719 38562117 -56710534 - MTC LTR MaLR 0 400 1 6 879 570 230 40 0 chr17 38562664 38562812 -56709839 - URR1A DNA MER1_type -2 224 71 6 879 1045 96 0 14 chr17 38563053 38563201 -56709450 - B1_Mm SINE Alu 0 147 2 6 879 450 179 0 0 chr17 38564146 38564241 -56708410 + (TA)n Simple_repeat Simple_repeat 1 95 0 6 879 589 261 57 42 chr17 38564267 38564459 -56708192 - MTC-int LTR MaLR -1042 216 22 7 879 1056 284 117 21 chr17 38564476 38564853 -56707798 - MTC LTR MaLR -8 413 1 7 879 412 272 19 0 chr17 38565391 38565494 -56707157 - URR1B DNA MER1_type -1 224 120 7 879 3734 45 25 6 chr17 38565686 38566159 -56706492 - RLTR45 LTR ERVK 0 482 1 7 879 57744 41 21 13 chr17 38566162 38568611 -56704040 - RLTR45-int LTR ERVK -4 7240 4762 7 879 396 0 0 0 chr17 38568611 38568655 -56703996 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 7 879 57744 41 21 13 chr17 38568655 38573385 -56699266 - RLTR45-int LTR ERVK -2483 4761 3 7 879 3678 53 25 8 chr17 38573385 38573859 -56698792 - RLTR45 LTR ERVK 0 482 1 7 879 3154 284 48 45 chr17 38573869 38575195 -56697456 - Lx7 LINE L1 -115 7581 6253 7 879 2298 299 18 7 chr17 38575235 38576372 -56696279 - Lx5 LINE L1 -605 6855 5509 7 879 525 32 0 0 chr17 38576380 38576443 -56696208 + (TA)n Simple_repeat Simple_repeat 1 63 0 7 879 21 36 0 0 chr17 38576861 38576889 -56695762 + AT_rich Low_complexity Low_complexity 1 28 0 7 879 26 50 0 0 chr17 38577155 38577195 -56695456 + AT_rich Low_complexity Low_complexity 1 40 0 7 879 5338 147 31 17 chr17 38577198 38578127 -56694524 - Lx3A LINE L1 -9 6972 6031 7 879 5660 121 5 3 chr17 38578464 38579321 -56693330 - L1_Mus3 LINE L1 0 6638 5781 8 879 3184 101 32 68 chr17 38579370 38579901 -56692750 + RLTR1B LTR ERV1 1 512 0 8 879 6167 72 5 6 chr17 38580081 38580890 -56691761 - RLTR13C2 LTR ERVK 0 808 1 8 879 917 300 22 3 chr17 38581339 38581698 -56690953 - Lx2B LINE L1 -17 7041 6575 8 879 2525 207 12 46 chr17 38581703 38582360 -56690291 + Lx3A LINE L1 3647 4281 -1596 8 879 8260 154 20 9 chr17 38582365 38584681 -56687970 + Lx3A LINE L1 4636 6975 -6 8 879 425 202 282 0 chr17 38584703 38584827 -56687824 + L1_Mur2 LINE L1 5108 5266 -611 8 879 539 257 106 0 chr17 38584858 38585037 -56687614 + Lx4A LINE L1 6857 7054 -4 8 879 184 77 0 49 chr17 38585041 38585082 -56687569 + (TTAAA)n Simple_repeat Simple_repeat 2 40 0 8 879 1630 289 72 46 chr17 38585715 38585954 -56686697 - Lx7 LINE L1 -4 7692 7469 8 879 326 119 15 0 chr17 38585954 38586021 -56686630 + Lx3_Mus LINE L1 6934 7001 -8 8 879 552 68 0 0 chr17 38586026 38586099 -56686552 + (TAAA)n Simple_repeat Simple_repeat 2 74 0 9 879 1630 289 72 46 chr17 38586099 38586729 -56685922 - Lx7 LINE L1 -232 7464 6794 8 879 1307 281 41 53 chr17 38586746 38587410 -56685241 - Lx7 LINE L1 -1215 6481 5826 8 879 186 125 71 0 chr17 38587462 38587518 -56685133 + A-rich Low_complexity Low_complexity 5 64 0 9 879 453 231 83 0 chr17 38587525 38587633 -56685018 - MTC LTR MaLR -69 352 236 9 879 316 258 78 81 chr17 38588406 38588727 -56683924 - RMER16-int LTR ERVK -308 6945 6626 9 879 788 292 37 63 chr17 38589841 38590462 -56682189 - RMER16-int LTR ERVK -1586 3820 3216 9 879 1244 254 21 18 chr17 38590446 38590786 -56681865 - RMER16-int LTR ERVK -1939 5467 5127 9 879 1991 250 52 22 chr17 38590853 38591548 -56681103 - RMER16-int LTR ERVK -2872 4534 4083 9 879 2496 193 11 27 chr17 38591570 38592169 -56680482 - RMER16-int LTR ERVK -2567 2839 2316 9 879 4134 212 28 38 chr17 38592161 38593175 -56679476 - ETnERV2-int LTR ERVK -4656 2750 1747 9 879 326 22 0 0 chr17 38593178 38593223 -56679428 - L1Md_F2 LINE L1 -12 6570 6526 9 879 621 273 95 9 chr17 38593607 38593818 -56678833 - MTC LTR MaLR -179 242 14 9 879 539 319 23 19 chr17 38593845 38594059 -56678592 + ORR1B1-int LTR MaLR 2 216 -1154 9 879 1629 307 79 2 chr17 38594080 38594661 -56677990 + Lx4A LINE L1 6431 7056 -2 9 879 2251 261 72 22 chr17 38594675 38595586 -56677065 + Lx5 LINE L1 5492 6439 -611 9 879 270 294 46 65 chr17 38595626 38595779 -56676872 + Lx5 LINE L1 6746 6895 -801 9 879 3051 69 5 2 chr17 38595886 38596281 -56676370 + MTA_Mm LTR MaLR 1 396 0 1 879 6329 85 87 76 chr17 38596281 38597368 -56675283 + MTA_Mm-int LTR MaLR 1 1098 0 1 879 2895 77 18 0 chr17 38597368 38597757 -56674894 + MTA_Mm LTR MaLR 1 396 0 1 879 497 371 59 22 chr17 38597760 38598116 -56674535 + Lx5 LINE L1 6665 7033 -17 1 879 2876 267 53 63 chr17 38598194 38598778 -56673873 - MTC-int LTR MaLR -288 970 390 1 879 502 28 14 14 chr17 38598778 38598851 -56673800 + (TTTTG)n Simple_repeat Simple_repeat 3 75 0 1 879 925 99 38 0 chr17 38598852 38598983 -56673668 - B1_Mm SINE Alu -9 138 3 1 879 2876 267 53 63 chr17 38598983 38599375 -56673276 - MTC-int LTR MaLR -869 389 2 1 879 203 179 0 0 chr17 38599392 38599431 -56673220 + A-rich Low_complexity Low_complexity 1 39 0 1 879 1173 276 53 16 chr17 38599431 38599751 -56672900 - MTC LTR MaLR -41 380 49 1 879 810 149 0 22 chr17 38599753 38599903 -56672748 + CT-rich Low_complexity Low_complexity 30 176 0 1 879 1007 118 7 0 chr17 38599903 38600047 -56672604 - B1_Mus1 SINE Alu -3 145 1 1 879 810 149 0 22 chr17 38600047 38600075 -56672576 + polypyrimidine Low_complexity Low_complexity 2 29 0 1 879 2168 94 22 66 chr17 38600535 38600899 -56671752 - L1Md_F2 LINE L1 -10 6572 6225 1 879 255 319 34 0 chr17 38601043 38601162 -56671489 - URR1B DNA MER1_type -1 224 102 1 879 9535 113 18 6 chr17 38601164 38602844 -56669807 + Lx3_Mus LINE L1 5324 7009 0 1 879 288 388 72 28 chr17 38603727 38603976 -56668675 - B4A SINE B4 -6 286 27 1 879 1274 233 68 59 chr17 38604248 38604585 -56668066 - ORR1B1 LTR MaLR 0 394 55 1 879 399 56 0 0 chr17 38604656 38604710 -56667941 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 879 507 289 45 35 chr17 38604887 38605088 -56667563 - RMER15-int LTR ERVL -3891 1108 906 1 879 189 261 77 0 chr17 38605540 38605605 -56667046 + L3 LINE CR1 4383 4452 -37 1 879 4211 174 14 25 chr17 38605689 38606475 -56666176 + Lx2 LINE L1 6190 6970 -27 1 879 1284 105 16 10 chr17 38606475 38606667 -56665984 + B2_Mm2 SINE B2 3 195 0 1 879 4211 174 14 25 chr17 38606667 38606697 -56665954 + Lx2 LINE L1 6971 6997 0 1 879 1953 253 25 78 chr17 38606698 38607340 -56665311 + Lx6 LINE L1 5737 6344 -1116 1 879 522 254 7 7 chr17 38607346 38607481 -56665170 + Lx5 LINE L1 6915 7049 -1 1 879 414 310 0 44 chr17 38611586 38611725 -56660926 + B1_Mur2 SINE Alu 14 143 -6 1 879 200 111 0 27 chr17 38614657 38614694 -56657957 + (CAG)n Simple_repeat Simple_repeat 3 38 0 1 879 503 305 96 77 chr17 38616194 38616873 -56655778 + L1M2 LINE L1 3040 3731 -2412 1 879 598 192 0 81 chr17 38617277 38617413 -56655238 + Lx4B LINE L1 6691 6815 -243 1 879 21 71 0 0 chr17 38617594 38617636 -56655015 + AT_rich Low_complexity Low_complexity 1 42 0 1 879 2710 178 61 4 chr17 38617753 38618279 -56654372 + Lx4A LINE L1 6502 7057 -1 1 879 938 164 7 0 chr17 38618357 38618503 -56654148 + B1_Mus1 SINE Alu 1 147 -1 1 879 429 284 47 7 chr17 38618595 38618744 -56653907 + Lx6 LINE L1 7281 7435 -25 1 879 414 235 37 67 chr17 38620981 38621161 -56651490 + L1VL4 LINE L1 390 535 -5767 1 879 617 306 46 0 chr17 38621157 38621353 -56651298 - Lx7 LINE L1 -1235 6461 6257 1 879 226 123 0 34 chr17 38621357 38621416 -56651235 + T-rich Low_complexity Low_complexity 2 58 0 1 879 407 294 146 5 chr17 38621472 38621684 -56650967 - Lx6 LINE L1 -598 6862 6621 1 879 5056 184 25 9 chr17 38621690 38622686 -56649965 + Lx2 LINE L1 5984 6995 -2 1 879 1265 246 60 30 chr17 38622766 38622950 -56649701 + MTC LTR MaLR 3 198 -223 1 879 1039 116 0 0 chr17 38622950 38623097 -56649554 + B1_Mm SINE Alu 1 147 0 1 879 1265 246 60 30 chr17 38623097 38623311 -56649340 + MTC LTR MaLR 199 413 -8 1 879 947 9 9 0 chr17 38623442 38623554 -56649097 + (CA)n Simple_repeat Simple_repeat 2 114 0 1 879 22031 129 16 6 chr17 38623993 38628355 -56644296 - L1_Mus2 LINE L1 0 6566 2162 1 879 242 316 29 67 chr17 38628355 38628460 -56644191 - MTC-int LTR MaLR -1156 102 2 1 879 744 269 20 25 chr17 38628459 38628661 -56643990 - MTC LTR MaLR 0 421 221 1 879 3722 100 2 0 chr17 38628709 38629220 -56643431 - L1_Mus2 LINE L1 -2 6564 6053 1 879 546 315 78 20 chr17 38629220 38629424 -56643227 - MTC LTR MaLR -190 231 16 1 879 1675 184 7 3 chr17 38630024 38630318 -56642333 + Lx3A LINE L1 6654 6948 -33 1 879 703 313 58 61 chr17 38630378 38631055 -56641596 - Lx7 LINE L1 -87 7609 6935 1 879 3803 202 28 13 chr17 38631069 38631892 -56640759 - Lx2 LINE L1 -2 6995 6161 1 879 254 147 38 51 chr17 38631893 38631972 -56640679 + A-rich Low_complexity Low_complexity 2 79 0 1 879 1562 315 38 11 chr17 38631996 38632663 -56639988 - Lx7 LINE L1 -752 6944 6260 1 879 1222 162 57 37 chr17 38632661 38632905 -56639746 - Lx LINE L1 -129 6525 6277 1 879 746 290 12 32 chr17 38632930 38633176 -56639475 + MTC LTR MaLR 173 413 -8 1 879 3688 135 57 45 chr17 38633190 38633875 -56638776 - L1_Mus3 LINE L1 0 6638 5946 1 879 233 98 24 0 chr17 38634154 38634195 -56638456 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 879 247 399 42 28 chr17 38634195 38634409 -56638242 - RMER12 LTR ERVK -364 958 742 1 879 22600 26 0 0 chr17 38635213 38638598 -56634053 - L1Md_A LINE L1 0 6582 3241 1 879 965 287 30 5 chr17 38639212 38639509 -56633142 - Lx3C LINE L1 -78 6980 6586 1 879 1474 221 35 14 chr17 38639523 38639950 -56632701 + L1_Mur2 LINE L1 3646 4081 -1796 1 879 2885 234 30 10 chr17 38641858 38642182 -56630469 - L1_Mur2 LINE L1 -1177 4700 4368 1 879 326 23 23 0 chr17 38642182 38642225 -56630426 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 879 2885 234 30 10 chr17 38642225 38642680 -56629971 - L1_Mur2 LINE L1 -1510 4367 3907 1 879 845 271 27 145 chr17 38642660 38643328 -56629323 - L1_Mur2 LINE L1 -3675 2202 1614 1 879 2497 211 35 65 chr17 38643327 38643453 -56629198 + L1_Mur2 LINE L1 3225 3353 -2524 1 879 1063 63 21 0 chr17 38643453 38643596 -56629055 + B1_Mm SINE Alu 2 147 0 1 879 2497 211 35 65 chr17 38643596 38644294 -56628357 + L1_Mur2 LINE L1 3354 4024 -1853 1 879 29360 86 3 2 chr17 38644293 38648399 -56624252 + L1Md_F2 LINE L1 1476 5586 -297 1 879 7723 64 1 0 chr17 38648399 38649382 -56623269 + L1Md_F2 LINE L1 5587 6570 -12 1 879 534 224 88 19 chr17 38649438 38649643 -56623008 + Lx7 LINE L1 7478 7696 0 1 879 1243 106 16 5 chr17 38649665 38649854 -56622797 + B2_Mm2 SINE B2 2 192 -3 1 879 2192 254 33 26 chr17 38649894 38650702 -56621949 - L1_Mur2 LINE L1 -3807 2070 1257 1 879 280 79 0 0 chr17 38650698 38650736 -56621915 + L1Md_A LINE L1 5996 6033 -549 1 879 1061 133 0 11 chr17 38650736 38650918 -56621733 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 879 665 230 6 0 chr17 38650919 38651097 -56621554 + CT-rich Low_complexity Low_complexity 2 180 0 1 879 1151 274 6 47 chr17 38651107 38651448 -56621203 + ORR1A4 LTR MaLR 3 329 0 1 879 1026 220 0 8 chr17 38651448 38651721 -56620930 - L1_Mur2 LINE L1 -6476 1252 916 1 879 38297 40 3 6 chr17 38651940 38658131 -56614520 - L1Md_T LINE L1 0 6582 415 1 879 298 324 78 21 chr17 38658600 38658742 -56613909 - RMER15 LTR ERVL -83 492 343 1 879 207 0 0 0 chr17 38659306 38659329 -56613322 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 879 25 31 0 0 chr17 38659781 38659813 -56612838 + AT_rich Low_complexity Low_complexity 1 32 0 1 879 227 312 53 99 chr17 38660105 38660276 -56612375 + L1MCa LINE L1 357 519 -5989 1 879 309 360 40 0 chr17 38660380 38660505 -56612146 + Lx8 LINE L1 7111 7240 -233 1 879 586 280 0 0 chr17 38660931 38661099 -56611552 + URR1A DNA MER1_type 58 225 -1 1 879 666 322 45 55 chr17 38662923 38663525 -56609126 + Lx9 LINE L1 6581 7176 -468 1 879 428 299 163 30 chr17 38664543 38664912 -56607739 - MTC LTR MaLR -3 418 1 1 879 293 200 189 20 chr17 38664916 38665064 -56607587 - MTC-int LTR MaLR -4 1254 1082 1 879 2339 265 50 0 chr17 38665064 38665679 -56606972 + Lx4A LINE L1 6404 7049 -9 1 109 755 330 84 33 chr17 38665707 38667235 -56605416 + Lx6 LINE L1 5501 7042 -8 1 880 2272 259 65 18 chr17 38667266 38667986 -56604665 - MTC-int LTR MaLR -503 755 2 1 880 772 335 83 23 chr17 38667985 38668382 -56604269 - MTC LTR MaLR 0 421 1 1 880 442 294 58 32 chr17 38668914 38669049 -56603602 - URR1A DNA MER1_type -2 224 85 1 880 3498 44 52 17 chr17 38669049 38669508 -56603143 - IAPLTR2_Mm LTR ERVK 0 475 1 1 880 442 294 58 32 chr17 38669508 38669562 -56603089 - URR1A DNA MER1_type -142 84 31 1 880 270 176 0 0 chr17 38670300 38670351 -56602300 + (TATATG)n Simple_repeat Simple_repeat 3 53 0 1 880 601 267 68 24 chr17 38670377 38670584 -56602067 - MTB_Mm-int LTR MaLR -1042 216 1 1 880 751 315 93 28 chr17 38670592 38670945 -56601706 - MTB_Mm LTR MaLR -14 393 18 1 880 27 0 0 0 chr17 38671753 38671780 -56600871 + AT_rich Low_complexity Low_complexity 1 27 0 1 880 405 247 128 32 chr17 38671798 38671916 -56600735 - MTC-int LTR MaLR -1044 214 89 1 880 360 0 0 0 chr17 38671916 38671956 -56600695 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1 880 405 247 128 32 chr17 38671956 38672025 -56600626 - MTC-int LTR MaLR -1170 88 10 1 880 1103 264 127 8 chr17 38672031 38672386 -56600265 - MTC LTR MaLR -2 419 23 1 880 455 233 19 0 chr17 38672953 38673056 -56599595 - URR1B DNA MER1_type -1 224 120 1 880 239 283 76 42 chr17 38673153 38673271 -56599380 - Lx7 LINE L1 -12 7684 7563 1 880 2886 24 3 0 chr17 38673288 38673624 -56599027 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 880 28975 13 1 1 chr17 38673624 38676862 -56595789 - IAPEz-int LTR ERVK 0 6481 3244 1 880 21629 38 35 14 chr17 38676854 38679543 -56593108 - IAPEz-int LTR ERVK -3730 2751 8 1 880 2874 27 3 0 chr17 38679543 38679879 -56592772 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 880 283 211 11 53 chr17 38679894 38679989 -56592662 + A-rich Low_complexity Low_complexity 5 95 0 1 880 1802 288 72 11 chr17 38680101 38680811 -56591840 - Lx7 LINE L1 -335 7361 6609 1 880 1260 302 50 21 chr17 38680814 38681372 -56591279 - Lx5 LINE L1 -841 6209 5636 1 880 4193 146 45 0 chr17 38681370 38682062 -56590589 - Lx3A LINE L1 -227 6754 6032 1 880 5376 121 19 1 chr17 38682397 38683238 -56589413 - L1_Mus3 LINE L1 -2 6636 5781 1 880 769 311 49 5 chr17 38683891 38684260 -56588391 - Lx2B LINE L1 -5 7053 6575 1 880 6844 231 29 38 chr17 38684265 38684911 -56587740 + Lx5 LINE L1 3647 4282 -1595 1 880 233 29 29 0 chr17 38684911 38684945 -56587706 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 880 6844 231 29 38 chr17 38684945 38686346 -56586305 + Lx5 LINE L1 4283 5675 -202 1 880 599 208 24 42 chr17 38686355 38686521 -56586130 + Lx5 LINE L1 5847 6009 -1041 1 880 1619 312 17 13 chr17 38686566 38687108 -56585543 - Lx5 LINE L1 0 7050 6507 1 880 1239 94 0 0 chr17 38687110 38687290 -56585361 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 1 880 11173 124 6 1 chr17 38687310 38689831 -56582820 - L1_Mus1 LINE L1 -1 6566 4032 1 880 1210 117 0 0 chr17 38689828 38690024 -56582627 + MusHAL1 LINE L1 1907 2102 -610 1 880 1686 158 30 52 chr17 38690018 38690475 -56582176 + L1_Mm LINE L1 3626 4042 -1841 1 880 1080 297 39 16 chr17 38690465 38690852 -56581799 - Lx5 LINE L1 -538 6512 6117 1 880 2885 84 5 18 chr17 38693045 38693446 -56579205 - MTA_Mm LTR MaLR 0 396 1 1 880 6363 98 34 43 chr17 38693457 38694489 -56578162 - MTA_Mm-int LTR MaLR -75 1023 1 1 880 3017 76 5 0 chr17 38694489 38694883 -56577768 - MTA_Mm LTR MaLR 0 396 1 1 880 26 64 0 0 chr17 38695272 38695319 -56577332 + AT_rich Low_complexity Low_complexity 1 47 0 1 880 498 96 0 0 chr17 38696078 38696151 -56576500 + (TA)n Simple_repeat Simple_repeat 2 74 0 2 880 182 261 0 92 chr17 38696407 38696483 -56576168 + L3 LINE CR1 154 222 -4267 2 880 637 295 37 0 chr17 38697051 38697268 -56575383 - URR1A DNA MER1_type -1 225 1 2 880 273 331 24 32 chr17 38697596 38697721 -56574930 - Lx8 LINE L1 -150 7323 7200 2 880 1729 258 80 22 chr17 38697730 38698367 -56574284 - L1_Mur2 LINE L1 -1279 4598 3925 2 880 1070 279 61 56 chr17 38698360 38698933 -56573718 - L1_Mur2 LINE L1 -3671 2206 1631 2 880 7688 208 156 34 chr17 38698946 38699278 -56573373 + Lx3A LINE L1 3226 3512 -2365 2 880 814 134 0 0 chr17 38699278 38699412 -56573239 - L1_Mus2 LINE L1 -3 6563 6430 2 880 7688 208 156 34 chr17 38699412 38699568 -56573083 + Lx3A LINE L1 3513 3668 -2209 2 880 1005 157 20 30 chr17 38699568 38699765 -56572886 - B2_Mm2 SINE B2 0 195 1 2 880 7688 189 92 21 chr17 38699765 38702692 -56569959 + Lx3A LINE L1 3669 6949 -32 2 880 312 27 0 0 chr17 38702714 38702751 -56569900 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 880 415 200 112 0 chr17 38702753 38702870 -56569781 + L1_Mur2 LINE L1 5107 5264 -619 2 880 498 223 57 7 chr17 38702907 38703047 -56569604 + Lx4A LINE L1 6853 6999 -59 2 880 227 161 36 0 chr17 38703079 38703135 -56569516 + A-rich Low_complexity Low_complexity 2 59 0 2 880 270 115 0 0 chr17 38703288 38703340 -56569311 + (T)n Simple_repeat Simple_repeat 1 52 0 2 880 472 339 91 0 chr17 38703398 38703619 -56569032 - Lx6 LINE L1 -598 6862 6622 2 880 5107 182 24 18 chr17 38703624 38704633 -56568018 + Lx2 LINE L1 5982 6996 -1 2 880 1042 267 111 16 chr17 38704696 38705073 -56567578 + MTC LTR MaLR 1 413 -8 2 880 804 172 0 0 chr17 38705213 38705382 -56567269 + (CA)n Simple_repeat Simple_repeat 2 170 0 2 880 19178 118 8 3 chr17 38705812 38707132 -56565519 - L1_Mus2 LINE L1 0 6566 5234 2 880 639 0 0 0 chr17 38707132 38707203 -56565448 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 880 19178 143 23 10 chr17 38707203 38708452 -56564199 - L1_Mus2 LINE L1 -650 5233 3972 2 880 333 0 0 0 chr17 38708452 38708489 -56564162 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 880 19178 143 23 10 chr17 38708489 38709570 -56563081 - L1_Mus2 LINE L1 -1912 3971 2892 2 880 213 39 0 0 chr17 38709570 38709596 -56563055 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 2 880 19178 143 23 10 chr17 38709596 38710000 -56562651 - L1_Mus2 LINE L1 -2992 2891 2471 2 880 2622 154 70 22 chr17 38710001 38710481 -56562170 - RLTR1C LTR ERV1 0 519 1 2 880 509 105 75 34 chr17 38710481 38710622 -56562029 - RLTR1B-int LTR ERV1 0 3299 3221 2 880 5026 113 8 9 chr17 38710606 38711362 -56561289 - MMVL30-int LTR ERV1 -67 3631 2877 2 880 4737 120 44 8 chr17 38711480 38712247 -56560404 - MMVL30-int LTR ERV1 -1467 2231 1501 2 880 690 13 0 0 chr17 38712395 38712474 -56560177 + (TC)n Simple_repeat Simple_repeat 2 80 0 2 880 495 250 79 26 chr17 38712475 38712627 -56560024 - MMVL30-int LTR ERV1 -2626 673 514 2 880 1334 209 127 40 chr17 38712882 38713459 -56559192 - MMVL30-int LTR ERV1 -6933 623 15 2 880 3126 118 12 18 chr17 38713490 38713981 -56558670 - RLTR1C LTR ERV1 -15 488 1 2 880 1909 137 16 0 chr17 38713981 38714296 -56558355 - L1_Mm LINE L1 -3414 2469 2150 2 880 184 30 61 0 chr17 38714325 38714358 -56558293 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 880 557 296 158 28 chr17 38714425 38714778 -56557873 - MTC LTR MaLR 0 421 23 2 880 449 287 45 0 chr17 38715345 38715502 -56557149 - URR1A DNA MER1_type -1 225 62 2 880 335 291 23 97 chr17 38716447 38716706 -56555945 + Lx8 LINE L1 5656 5895 -1578 2 880 387 0 0 0 chr17 38717149 38717192 -56555459 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 880 279 0 0 0 chr17 38717192 38717222 -56555429 + (GA)n Simple_repeat Simple_repeat 2 32 0 2 880 681 259 36 23 chr17 38717244 38717465 -56555186 - MTC-int LTR MaLR -1034 224 1 2 880 961 265 122 12 chr17 38717463 38717815 -56554836 - MTC LTR MaLR -2 419 18 2 880 1589 192 24 3 chr17 38718410 38718703 -56553948 + Lx3A LINE L1 6650 6948 -33 2 880 609 344 59 45 chr17 38718755 38719421 -56553230 - Lx7 LINE L1 -87 7609 6935 2 880 3907 196 36 21 chr17 38719438 38720262 -56552389 - Lx2 LINE L1 0 6997 6161 2 880 1327 309 33 18 chr17 38720389 38720937 -56551714 - Lx7 LINE L1 -775 6921 6366 2 880 2012 144 53 53 chr17 38720977 38721373 -56551278 - L1_Mus3 LINE L1 -297 6341 5946 2 880 598 220 6 6 chr17 38721670 38721848 -56550803 + (TA)n Simple_repeat Simple_repeat 2 179 0 2 880 922 285 27 13 chr17 38722381 38722678 -56549973 - Lx3C LINE L1 -77 6981 6586 2 880 998 215 40 22 chr17 38722693 38722969 -56549682 + Lx5 LINE L1 3649 3929 -1948 2 880 1387 114 0 5 chr17 38722969 38723172 -56549479 - L1_Mus1 LINE L1 -116 6451 6250 2 880 555 118 18 35 chr17 38723172 38723286 -56549365 + L1Md_F2 LINE L1 6459 6570 -12 2 880 225 0 0 0 chr17 38723342 38723367 -56549284 + (A)n Simple_repeat Simple_repeat 1 25 0 2 880 2181 256 19 13 chr17 38723395 38724084 -56548567 + Lx5 LINE L1 3951 4643 -1234 2 880 255 183 0 0 chr17 38724085 38724167 -56548484 + T-rich Low_complexity Low_complexity 1 82 0 2 880 7398 79 2 3 chr17 38724217 38725575 -56547076 - L1Md_F2 LINE L1 -15 6567 5211 2 880 4373 282 27 19 chr17 38725593 38727969 -56544682 + Lx5 LINE L1 4649 7050 0 2 880 4569 94 0 21 chr17 38729127 38729801 -56542850 + L1Md_F2 LINE L1 5911 6570 -12 2 880 29 28 0 0 chr17 38730058 38730094 -56542557 + AT_rich Low_complexity Low_complexity 1 36 0 2 880 576 302 56 5 chr17 38732187 38732400 -56540251 - URR1A DNA MER1_type -2 224 1 2 880 233 336 67 0 chr17 38732727 38732861 -56539790 - Lx8 LINE L1 -154 7319 7177 2 880 2955 220 18 40 chr17 38733056 38733876 -56538775 - L1_Mur2 LINE L1 -1176 4701 3900 2 880 727 287 144 25 chr17 38733848 38734099 -56538552 - L1_Mur2 LINE L1 -3673 2204 1896 2 880 745 178 13 0 chr17 38734099 38734251 -56538400 - L1_Mus4 LINE L1 -5 6631 6478 2 880 727 287 144 25 chr17 38734251 38734527 -56538124 - L1_Mur2 LINE L1 -3982 1895 1614 2 880 1345 196 307 48 chr17 38734526 38734917 -56537734 + L1_Mur2 LINE L1 3225 3802 -2075 2 880 7456 54 6 0 chr17 38734917 38735869 -56536782 + L1Md_F2 LINE L1 5625 6582 0 2 880 1345 196 307 48 chr17 38735869 38736141 -56536510 + L1_Mur2 LINE L1 3803 4060 -1817 2 880 2611 60 0 110 chr17 38736578 38736988 -56535663 - RLTR10B2 LTR ERVK 0 365 1 2 880 3947 151 17 29 chr17 38736988 38737682 -56534969 - IAPEY3-int LTR ERVK 0 7680 6995 2 880 1490 116 99 0 chr17 38737686 38737918 -56534733 - IAP-d-int LTR ERVK -1287 5255 5001 2 880 516 302 34 26 chr17 38737918 38738197 -56534454 - IAP-d-int LTR ERVK -5479 1063 822 2 880 2739 87 92 24 chr17 38738337 38738761 -56533890 - RLTR10-int LTR ERVK -995 992 553 2 880 362 135 45 45 chr17 38738761 38738893 -56533758 + CT-rich Low_complexity Low_complexity 3 134 0 2 880 1131 97 6 28 chr17 38738978 38739158 -56533493 - RLTR10-int LTR ERVK -7403 178 3 2 880 2549 66 0 157 chr17 38739160 38739593 -56533058 - RLTR10B2 LTR ERVK 0 365 1 2 880 243 288 48 108 chr17 38739649 38739964 -56532687 - Lx7 LINE L1 -4 7692 7397 2 880 21 0 0 0 chr17 38740068 38740089 -56532562 + AT_rich Low_complexity Low_complexity 1 21 0 2 880 898 302 71 16 chr17 38740089 38740513 -56532138 - Lx7 LINE L1 -360 7336 6890 2 880 2329 259 34 43 chr17 38740695 38741533 -56531118 - L1_Mur2 LINE L1 -3796 2081 1251 2 880 1253 79 11 0 chr17 38741533 38741711 -56530940 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2 880 2329 259 34 43 chr17 38741711 38741726 -56530925 - L1_Mur2 LINE L1 -4627 1250 1236 2 880 620 26 13 0 chr17 38741729 38741807 -56530844 + (TC)n Simple_repeat Simple_repeat 2 80 0 2 880 1126 238 54 43 chr17 38741827 38742162 -56530489 + ORR1B1 LTR MaLR 7 392 -2 2 880 1054 217 16 37 chr17 38742164 38742540 -56530111 - L1_Mur2 LINE L1 -6476 1252 892 2 880 303 329 75 25 chr17 38743113 38743272 -56529379 - RMER15 LTR ERVL -68 507 341 2 880 23 0 0 0 chr17 38743537 38743560 -56529091 + AT_rich Low_complexity Low_complexity 1 23 0 2 880 288 53 0 0 chr17 38743828 38743866 -56528785 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2 880 25 31 0 0 chr17 38744329 38744361 -56528290 + AT_rich Low_complexity Low_complexity 1 32 0 2 880 251 361 62 50 chr17 38744718 38744960 -56527691 + L1MCa LINE L1 357 601 -5907 2 880 320 360 40 0 chr17 38744992 38745117 -56527534 + Lx8 LINE L1 7111 7240 -233 2 880 571 292 0 0 chr17 38745544 38745712 -56526939 + URR1A DNA MER1_type 58 225 -1 2 880 612 309 39 47 chr17 38747631 38747994 -56524657 + Lx9 LINE L1 6817 7176 -468 2 880 528 278 183 41 chr17 38748999 38749366 -56523285 - MTC LTR MaLR -2 419 1 2 880 2150 267 55 0 chr17 38749539 38750119 -56522532 + Lx4A LINE L1 6437 7048 -10 2 880 2291 314 56 69 chr17 38750139 38751730 -56520921 + Lx5 LINE L1 5492 7042 -8 2 880 3247 268 50 11 chr17 38751795 38752726 -56519925 - MTC-int LTR MaLR -289 969 2 2 880 717 358 83 25 chr17 38752725 38753123 -56519528 - MTC LTR MaLR 0 421 1 2 880 664 224 53 6 chr17 38753657 38753828 -56518823 - URR1A DNA MER1_type -2 224 46 2 880 627 14 0 0 chr17 38754957 38755029 -56517622 + (TA)n Simple_repeat Simple_repeat 1 72 0 2 880 629 303 38 24 chr17 38755055 38755268 -56517383 - MTC-int LTR MaLR -1042 216 1 2 880 973 280 124 30 chr17 38755277 38755649 -56517002 - MTC LTR MaLR -14 407 1 2 880 321 312 75 25 chr17 38756449 38756610 -56516041 - MTC-int LTR MaLR -1005 253 85 2 880 216 0 0 0 chr17 38756610 38756634 -56516017 + (A)n Simple_repeat Simple_repeat 1 24 0 2 880 735 273 109 150 chr17 38756708 38757122 -56515529 - MTC LTR MaLR -2 419 23 2 880 283 301 96 24 chr17 38757635 38757689 -56514962 + CYRA11_Mm Unknown Y-chromosome 111 252 -365 2 880 444 228 20 0 chr17 38757689 38757790 -56514861 - URR1B DNA MER1_type -3 222 120 2 880 283 301 96 24 chr17 38757790 38757802 -56514849 + CYRA11_Mm Unknown Y-chromosome 253 289 -328 2 880 3197 286 63 41 chr17 38757887 38759289 -56513362 - Lx7 LINE L1 -12 7684 6253 2 880 1715 283 94 8 chr17 38759336 38760391 -56512260 - Lx5 LINE L1 -602 6858 5507 2 880 372 210 0 0 chr17 38760535 38760616 -56512035 + (TA)n Simple_repeat Simple_repeat 1 81 0 2 880 1000 211 52 0 chr17 38761091 38761323 -56511328 - Lx LINE L1 -1 6653 6410 2 880 322 237 0 44 chr17 38761372 38761531 -56511120 + (TA)n Simple_repeat Simple_repeat 2 153 0 2 880 26 0 0 0 chr17 38761592 38761618 -56511033 + AT_rich Low_complexity Low_complexity 1 26 0 2 880 29 47 0 0 chr17 38761819 38761862 -56510789 + AT_rich Low_complexity Low_complexity 1 43 0 2 880 5222 150 37 8 chr17 38761988 38762907 -56509744 - Lx3A LINE L1 -4 6977 6032 2 880 5190 127 18 0 chr17 38763247 38764085 -56508566 - L1_Mus3 LINE L1 -2 6636 5784 2 880 754 303 26 75 chr17 38764742 38765143 -56507508 - Lx2B LINE L1 -5 7053 6575 2 880 4973 224 138 19 chr17 38765148 38765793 -56506858 + Lx5 LINE L1 3647 4279 -1598 2 880 298 57 38 0 chr17 38765793 38765846 -56506805 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 2 880 4973 224 138 19 chr17 38765846 38766826 -56505825 + Lx5 LINE L1 4280 5466 -411 2 880 1561 77 319 39 chr17 38766828 38767113 -56505538 - RLTR10B2 LTR ERVK 0 365 1 2 880 3946 101 8 8 chr17 38767115 38767942 -56504709 - MMERVK10C-int LTR ERVK -2 7678 6827 2 880 15522 69 0 5 chr17 38767941 38769944 -56502707 - MMERVK10C-int LTR ERVK -3075 4506 2513 2 880 389 82 16 0 chr17 38769941 38770002 -56502649 - MMERVK10C-int LTR ERVK -5634 1947 1886 2 880 364 185 121 24 chr17 38769994 38770077 -56502574 - MMERVK10C-int LTR ERVK -5109 1028 938 2 880 1234 170 110 7 chr17 38770208 38770480 -56502171 - MMERVK10C-int LTR ERVK -4795 611 312 2 880 1267 172 8 0 chr17 38770569 38770807 -56501844 - MMERVK10C-int LTR ERVK -6629 952 713 2 880 1277 95 2 9 chr17 38770825 38771094 -56501557 - MMERVK10C-int LTR ERVK -7231 350 3 2 880 2125 80 0 113 chr17 38771109 38771463 -56501188 - RLTR10B2 LTR ERVK -51 314 1 2 880 1570 210 61 31 chr17 38771464 38771987 -56500664 + Lx5 LINE L1 5465 6008 -1042 2 880 1559 314 18 15 chr17 38772035 38772578 -56500073 - Lx5 LINE L1 0 7050 6506 2 880 675 183 0 0 chr17 38772578 38772709 -56499942 + T-rich Low_complexity Low_complexity 5 135 0 2 880 1248 91 0 0 chr17 38772710 38772886 -56499765 + (TTTCC)n Simple_repeat Simple_repeat 3 178 0 2 880 4398 97 8 3 chr17 38772888 38773511 -56499140 - L1_Mus1 LINE L1 0 6567 5942 2 880 291 121 0 0 chr17 38773516 38773574 -56499077 + (T)n Simple_repeat Simple_repeat 1 58 0 2 880 11037 138 9 3 chr17 38773574 38775507 -56497144 - L1_Mus1 LINE L1 -594 5973 4029 2 880 3063 157 50 10 chr17 38775501 38775872 -56496779 + L1_Mm LINE L1 3111 3476 -2407 3 880 272 27 27 0 chr17 38775872 38775909 -56496742 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 3 880 3063 157 50 10 chr17 38775909 38776131 -56496520 + L1_Mm LINE L1 3477 3727 -2156 3 880 2886 87 8 2 chr17 38778234 38778628 -56494023 - MTA_Mm LTR MaLR 0 396 1 3 880 6417 93 28 2 chr17 38778640 38779592 -56493059 - MTA_Mm-int LTR MaLR -121 977 1 3 880 2889 84 5 15 chr17 38779592 38779992 -56492659 - MTA_Mm LTR MaLR 0 396 1 3 880 27 49 0 0 chr17 38780363 38780404 -56492247 + AT_rich Low_complexity Low_complexity 1 41 0 3 880 547 263 60 28 chr17 38782081 38782296 -56490355 - URR1A DNA MER1_type 0 226 5 3 880 233 389 0 0 chr17 38782721 38782829 -56489822 - Lx8 LINE L1 -246 7227 7120 3 880 2408 259 45 7 chr17 38782965 38783715 -56488936 - L1_Mur2 LINE L1 -1178 4699 3921 3 880 1220 267 66 56 chr17 38783704 38784291 -56488360 - L1_Mur2 LINE L1 -3671 2206 1614 3 880 1754 237 56 52 chr17 38784316 38784618 -56488033 + Lx3A LINE L1 3239 3513 -2364 3 880 843 119 0 7 chr17 38784618 38784753 -56487898 - L1_Mus2 LINE L1 -3 6563 6430 3 880 1754 237 56 52 chr17 38784753 38785127 -56487524 + Lx3A LINE L1 3514 3918 -1959 3 880 15394 67 6 1 chr17 38785129 38787171 -56485480 + L1Md_F2 LINE L1 3535 5586 -297 3 880 7694 61 2 6 chr17 38787171 38788171 -56484480 + L1Md_F2 LINE L1 5587 6582 0 3 880 216 97 0 0 chr17 38788195 38788226 -56484425 + (A)n Simple_repeat Simple_repeat 1 31 0 3 880 8882 178 32 6 chr17 38788238 38791049 -56481602 + Lx3A LINE L1 3953 6833 -148 3 880 450 196 263 0 chr17 38791053 38791186 -56481465 + L1_Mur2 LINE L1 5100 5267 -610 3 880 446 283 48 11 chr17 38791219 38791408 -56481243 + Lx3A LINE L1 6860 7055 -3 3 880 39 0 0 0 chr17 38791408 38791447 -56481204 + AT_rich Low_complexity Low_complexity 1 39 0 3 880 327 309 14 37 chr17 38792070 38792285 -56480366 - Lx7 LINE L1 -4 7692 7483 3 880 295 179 64 0 chr17 38792298 38792376 -56480275 + Lx3_Mus LINE L1 6919 7001 -8 3 880 1491 267 60 27 chr17 38792485 38793032 -56479619 - Lx7 LINE L1 -338 7358 6794 3 880 1082 315 37 35 chr17 38793068 38793719 -56478932 - Lx7 LINE L1 -1233 6463 5812 3 880 230 133 0 62 chr17 38793742 38793822 -56478829 + A-rich Low_complexity Low_complexity 3 77 0 3 880 980 274 93 6 chr17 38793831 38794143 -56478508 - MTC LTR MaLR -69 352 14 3 880 486 299 38 11 chr17 38794198 38794384 -56478267 + ORR1D-int LTR MaLR 26 216 -1154 3 880 1838 289 66 8 chr17 38794384 38794990 -56477661 + Lx4A LINE L1 6412 7049 -9 3 880 2000 274 72 21 chr17 38795010 38795919 -56476732 + Lx5 LINE L1 5495 6441 -609 3 880 643 329 53 63 chr17 38795992 38796565 -56476086 + Lx5 LINE L1 6495 7011 -39 3 13 3200 263 67 10 chr17 38796661 38797578 -56475073 - MTC-int LTR MaLR -288 970 2 3 881 195 139 0 0 chr17 38797604 38797640 -56475011 + (A)n Simple_repeat Simple_repeat 1 36 0 3 881 1189 297 20 26 chr17 38797640 38797982 -56474669 - MTB_Mm LTR MaLR -43 364 25 3 881 1685 26 0 0 chr17 38798583 38798776 -56473875 - B2_Mm1t SINE B2 0 193 1 3 881 7506 143 16 8 chr17 38798825 38800361 -56472290 + Lx3_Mus LINE L1 5309 6855 -154 3 881 283 251 83 63 chr17 38800374 38800532 -56472119 + Lx5 LINE L1 5737 5895 -1578 3 881 2667 62 17 6 chr17 38800566 38800923 -56471728 + L1Md_F2 LINE L1 6220 6580 -2 3 881 574 82 68 7 chr17 38801394 38801541 -56471110 + (TA)n Simple_repeat Simple_repeat 2 157 0 3 881 397 297 70 35 chr17 38801553 38801724 -56470927 - MTC-int LTR MaLR -1034 224 48 3 881 321 239 22 22 chr17 38801724 38801814 -56470837 - Lx7 LINE L1 -347 7349 7260 3 881 8821 68 8 1 chr17 38801827 38803658 -56468993 - L1Md_F3 LINE L1 0 6584 4742 3 881 5186 179 24 14 chr17 38803819 38804825 -56467826 + Lx2 LINE L1 5982 6997 0 3 881 499 286 32 97 chr17 38804948 38805227 -56467424 - ETnERV-int LTR ERVK -3051 263 3 3 881 596 156 0 0 chr17 38805229 38805325 -56467326 - RLTR9D LTR ERVK 0 403 308 3 881 3012 74 5 5 chr17 38805326 38805720 -56466931 - MTA_Mm LTR MaLR -2 394 1 3 881 4526 99 1 9 chr17 38805720 38806377 -56466274 - MTA_Mm-int LTR MaLR 0 1098 447 3 881 2896 67 13 0 chr17 38806377 38806765 -56465886 + MTA_Mm LTR MaLR 4 396 0 3 881 6282 105 58 91 chr17 38806765 38807900 -56464751 + MTA_Mm-int LTR MaLR 1 1098 0 3 881 3133 51 18 0 chr17 38807900 38808289 -56464362 + MTA_Mm LTR MaLR 1 396 0 3 881 7739 133 25 12 chr17 38808289 38808629 -56464022 - MusHAL1 LINE L1 -368 2344 2002 3 881 279 0 0 0 chr17 38808629 38808660 -56463991 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 3 881 7739 133 25 12 chr17 38808660 38809695 -56462956 - MusHAL1 LINE L1 -711 2001 952 3 881 564 279 24 29 chr17 38809793 38809963 -56462688 - MTC LTR MaLR 0 421 253 3 881 468 0 0 0 chr17 38809977 38810029 -56462622 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 881 465 301 92 49 chr17 38810030 38810215 -56462436 - MTC LTR MaLR -228 193 1 3 881 539 276 19 0 chr17 38810734 38810890 -56461761 - URR1A DNA MER1_type -6 220 62 3 881 21 57 0 0 chr17 38811269 38811304 -56461347 + AT_rich Low_complexity Low_complexity 1 35 0 3 881 483 304 31 27 chr17 38811736 38812062 -56460589 + Lx7 LINE L1 5530 5895 -1578 3 881 459 0 0 0 chr17 38812169 38812220 -56460431 + (TA)n Simple_repeat Simple_repeat 1 51 0 3 881 498 98 0 0 chr17 38812552 38812634 -56460017 + (TA)n Simple_repeat Simple_repeat 1 82 0 3 881 243 0 0 0 chr17 38812634 38812660 -56459991 + (GA)n Simple_repeat Simple_repeat 2 28 0 3 881 661 272 31 27 chr17 38812679 38812902 -56459749 - MTC-int LTR MaLR -1034 224 1 3 881 1070 240 112 30 chr17 38812900 38813222 -56459429 - MTC LTR MaLR -2 419 55 3 881 776 171 0 0 chr17 38813857 38813986 -56458665 + Lx3A LINE L1 6650 6778 -203 3 881 41188 6 0 0 chr17 38813992 38820567 -56452084 - L1Md_A LINE L1 0 6582 7 3 881 808 207 40 6 chr17 38820565 38820740 -56451911 + Lx3A LINE L1 6768 6948 -33 3 881 367 331 83 60 chr17 38820795 38821447 -56451204 - Lx7 LINE L1 -95 7601 6935 3 881 3593 191 63 22 chr17 38821461 38822265 -56450386 - Lx2 LINE L1 0 6997 6161 3 881 1601 305 40 20 chr17 38822397 38823042 -56449609 - Lx7 LINE L1 -779 6917 6260 3 881 1331 158 59 17 chr17 38823041 38823279 -56449372 - Lx LINE L1 -130 6524 6277 3 881 683 277 29 45 chr17 38823303 38823549 -56449102 + MTB_Mm LTR MaLR 158 399 -8 3 881 4187 138 15 0 chr17 38823563 38824249 -56448402 - L1_Mus3 LINE L1 0 6638 5943 3 881 800 71 9 0 chr17 38824449 38824561 -56448090 + (TA)n Simple_repeat Simple_repeat 1 113 0 3 881 210 143 0 0 chr17 38825316 38825351 -56447300 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 881 23 33 0 0 chr17 38825858 38825888 -56446763 + AT_rich Low_complexity Low_complexity 1 30 0 3 881 1018 279 21 14 chr17 38825925 38826223 -56446428 - Lx3C LINE L1 -78 6980 6586 3 881 4647 224 35 42 chr17 38826238 38826436 -56446215 + L1_Mur2 LINE L1 3649 3842 -2035 3 881 221 0 0 33 chr17 38826436 38826466 -56446185 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 881 4647 224 35 42 chr17 38826466 38827678 -56444973 + L1_Mur2 LINE L1 3843 5049 -828 3 881 2769 235 23 21 chr17 38828499 38829294 -56443357 - L1_Mur2 LINE L1 -1176 4701 3906 3 881 766 273 178 14 chr17 38829274 38829515 -56443136 - L1_Mur2 LINE L1 -3675 2202 1902 3 881 679 191 20 0 chr17 38829515 38829667 -56442984 - L1_Mus4 LINE L1 -4 6632 6478 3 881 766 273 178 14 chr17 38829667 38829861 -56442790 - L1_Mur2 LINE L1 -3976 1901 1704 3 881 432 37 0 0 chr17 38829861 38829915 -56442736 + (TTTC)n Simple_repeat Simple_repeat 3 56 0 3 881 766 273 178 14 chr17 38829915 38829984 -56442667 - L1_Mur2 LINE L1 -4174 1703 1615 3 881 4184 209 44 7 chr17 38829983 38831099 -56441552 + L1_Mur2 LINE L1 3225 4381 -1496 3 881 261 83 0 0 chr17 38831099 38831135 -56441516 + (T)n Simple_repeat Simple_repeat 1 36 0 3 881 36032 68 2 2 chr17 38831300 38837402 -56435249 - L1Md_F3 LINE L1 -15 6569 513 3 881 3375 203 21 62 chr17 38837403 38838363 -56434288 + L1_Mur2 LINE L1 4366 5285 -592 3 881 522 246 142 6 chr17 38838370 38838546 -56434105 + Lx4A LINE L1 6852 7051 -7 3 881 241 290 130 39 chr17 38838625 38838855 -56433796 - L1M2 LINE L1 -479 5818 5568 3 881 315 286 41 99 chr17 38839180 38839494 -56433157 - Lx7 LINE L1 -4 7692 7397 3 881 23 0 0 0 chr17 38839610 38839633 -56433018 + AT_rich Low_complexity Low_complexity 1 23 0 3 881 785 298 80 24 chr17 38839633 38840056 -56432595 - Lx7 LINE L1 -360 7336 6890 3 881 5244 186 49 10 chr17 38840082 38841254 -56431397 - Lx2 LINE L1 -301 6696 5478 3 881 1850 87 0 0 chr17 38841274 38841526 -56431125 - L1_Mm LINE L1 -1915 3968 3717 3 881 6119 76 17 1 chr17 38841527 38842019 -56430632 + L1Md_F2 LINE L1 4742 5234 -649 3 881 450 0 0 0 chr17 38842019 38842069 -56430582 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 881 6119 76 17 1 chr17 38842069 38842407 -56430244 + L1Md_F2 LINE L1 5235 5583 -300 3 881 6625 99 27 10 chr17 38842408 38843383 -56429268 + L1Md_F2 LINE L1 5587 6577 -5 3 881 1439 194 78 11 chr17 38843393 38843753 -56428898 - Lx2 LINE L1 -423 5454 5071 3 881 4936 189 54 8 chr17 38843766 38844404 -56428247 - Lx2 LINE L1 -1400 4477 3827 3 881 5389 125 116 22 chr17 38844404 38845303 -56427348 - RLTR13C1 LTR ERVK 0 983 1 3 881 4936 189 54 8 chr17 38845303 38845844 -56426807 - Lx2 LINE L1 -2051 3826 3251 3 881 644 30 20 20 chr17 38845844 38845945 -56426706 + (TCTA)n Simple_repeat Simple_repeat 4 104 0 3 881 4936 189 54 8 chr17 38845945 38845962 -56426689 - Lx2 LINE L1 -2627 3250 3227 3 881 1251 272 72 40 chr17 38845961 38846532 -56426119 + Lx4B LINE L1 1614 2202 -3675 3 881 985 220 0 75 chr17 38846529 38846809 -56425842 + Lx4B LINE L1 3925 4183 -1694 3 881 424 283 42 6 chr17 38846817 38846984 -56425667 + URR1A DNA MER1_type 51 223 -3 3 881 3066 66 8 0 chr17 38847231 38847624 -56425027 - MTA_Mm LTR MaLR 0 396 1 3 881 7537 84 12 36 chr17 38847624 38848749 -56423902 - MTA_Mm-int LTR MaLR 0 1098 1 3 881 2045 160 58 0 chr17 38848868 38849250 -56423401 + L1_Mm LINE L1 3770 4173 -1710 3 881 1830 150 3 0 chr17 38849250 38849544 -56423107 - L1_Mur1 LINE L1 -88 5798 5504 3 881 749 312 49 56 chr17 38849537 38850108 -56422543 - Lx7 LINE L1 -194 7502 6936 3 881 3531 209 35 40 chr17 38850124 38850959 -56421692 - Lx2 LINE L1 -3 6994 6164 3 881 180 0 0 0 chr17 38850959 38850979 -56421672 + (CAAA)n Simple_repeat Simple_repeat 4 23 0 3 881 1306 322 75 11 chr17 38851018 38851667 -56420984 - Lx7 LINE L1 -751 6945 6255 3 881 387 0 0 0 chr17 38851669 38851712 -56420939 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 3 881 496 343 50 43 chr17 38851768 38852250 -56420401 - Lx5 LINE L1 -598 6862 6159 3 881 397 116 0 31 chr17 38852262 38852360 -56420291 + (CAAAAA)n Simple_repeat Simple_repeat 1 95 0 3 881 5424 216 45 49 chr17 38852373 38854139 -56418512 + Lx4B LINE L1 4208 5951 -1107 3 881 892 287 35 74 chr17 38854268 38854555 -56418096 + Lx4B LINE L1 6656 6928 -122 3 881 1052 102 0 0 chr17 38854555 38854702 -56417949 - B1_Mus1 SINE Alu 0 148 2 3 881 892 287 35 74 chr17 38854702 38854817 -56417834 + Lx4B LINE L1 6929 7042 -8 3 881 1336 199 97 27 chr17 38856994 38857324 -56415327 - Lx LINE L1 -3 6651 6299 3 881 474 18 0 0 chr17 38857924 38857979 -56414672 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 881 276 30 0 0 chr17 38857994 38858027 -56414624 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 881 12813 127 32 5 chr17 38858443 38861174 -56411477 + L1_Mus2 LINE L1 3770 6581 -1 3 881 835 270 34 28 chr17 38861178 38861545 -56411106 - L1_Mur3 LINE L1 -3873 2013 1625 3 881 393 39 0 0 chr17 38861565 38861616 -56411035 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 3 881 1586 142 0 0 chr17 38861657 38861897 -56410754 - L1_Mus2 LINE L1 -2 6564 6325 3 881 7324 202 49 12 chr17 38861904 38863153 -56409498 + Lx5 LINE L1 3326 4630 -1247 3 881 477 0 0 0 chr17 38863153 38863206 -56409445 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 881 7324 202 49 12 chr17 38863206 38863841 -56408810 + Lx5 LINE L1 4631 5280 -597 3 881 481 256 43 14 chr17 38863862 38864001 -56408650 + Lx4A LINE L1 6864 7006 -52 3 881 25 51 0 0 chr17 38864127 38864166 -56408485 + AT_rich Low_complexity Low_complexity 1 39 0 3 881 249 261 122 8 chr17 38864191 38864322 -56408329 - L1M2 LINE L1 -558 5742 5597 3 881 1163 316 74 39 chr17 38864647 38865511 -56407140 - Lx7 LINE L1 -9 7687 6794 4 881 958 311 29 66 chr17 38865546 38866169 -56406482 - Lx7 LINE L1 -1232 6464 5865 4 881 1113 278 72 9 chr17 38866314 38866648 -56406003 - MTC LTR MaLR -66 355 1 4 881 343 263 71 14 chr17 38866660 38866846 -56405805 + ORR1B1-int LTR MaLR 2 219 -1039 4 881 1720 300 46 82 chr17 38866850 38867904 -56404747 + Lx5 LINE L1 5587 6831 -629 3 881 1702 228 108 21 chr17 38867922 38868402 -56404249 - MTC-int LTR MaLR -717 541 20 4 881 416 104 47 0 chr17 38868455 38868561 -56404090 + A-rich Low_complexity Low_complexity 2 112 0 4 881 511 237 45 55 chr17 38868561 38868726 -56403925 - MTB_Mm LTR MaLR -45 351 165 4 881 5138 95 4 0 chr17 38868726 38869439 -56403212 - L1_Mm LINE L1 -678 5205 4490 4 881 9141 123 23 21 chr17 38869438 38870935 -56401716 - L1_Mus2 LINE L1 -303 5580 4081 4 881 6345 122 15 9 chr17 38870931 38871905 -56400746 + L1_Mus2 LINE L1 5587 6566 0 4 881 696 64 0 9 chr17 38872287 38872398 -56400253 + L1Md_F3 LINE L1 6472 6581 -3 4 881 514 303 37 11 chr17 38872755 38872942 -56399709 - URR1A DNA MER1_type -3 223 32 4 881 432 0 0 0 chr17 38873651 38873699 -56398952 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 881 414 318 26 49 chr17 38873809 38874176 -56398475 + Lx8 LINE L1 5522 5885 -1588 4 881 737 271 43 24 chr17 38874639 38874892 -56397759 - MTC-int LTR MaLR -1000 258 1 4 881 1043 269 148 11 chr17 38874890 38875255 -56397396 - MTC LTR MaLR -2 419 5 4 881 853 293 24 2 chr17 38875396 38875679 -56396972 + Lx2B LINE L1 6596 6979 -79 4 881 229 216 0 0 chr17 38876293 38876344 -56396307 + A-rich Low_complexity Low_complexity 1 51 0 4 881 346 303 10 0 chr17 38876344 38876443 -56396208 - MTA_Mm LTR MaLR -290 106 7 4 881 328 291 87 13 chr17 38876450 38876600 -56396051 - MTA_Mm-int LTR MaLR -1 1257 1097 4 881 1967 308 42 14 chr17 38876604 38877701 -56394950 + Lx5 LINE L1 5499 6862 -598 4 881 577 110 22 14 chr17 38877767 38877905 -56394746 + (TA)n Simple_repeat Simple_repeat 2 140 0 4 881 294 209 60 0 chr17 38877907 38877974 -56394677 + Lx8 LINE L1 6244 6314 -1382 4 881 674 146 196 7 chr17 38877993 38878131 -56394520 + L1_Mus1 LINE L1 409 572 -6044 4 881 3712 110 4 0 chr17 38878140 38878694 -56393957 + L1_Mus1 LINE L1 4060 4615 -1268 4 881 4405 43 0 2 chr17 38878692 38879474 -56393177 - L1Md_F3 LINE L1 -467 6117 5337 4 881 3439 62 0 21 chr17 38879501 38879975 -56392676 + L1Md_F3 LINE L1 6120 6583 -1 4 881 7674 121 15 6 chr17 38879975 38881918 -56390733 + L1_Mus1 LINE L1 4605 6566 -1 4 881 460 157 58 10 chr17 38882032 38882135 -56390516 + L1_Mus2 LINE L1 6457 6564 -2 4 881 596 269 7 0 chr17 38882161 38882302 -56390349 + B1_Mus2 SINE Alu 6 147 0 4 881 21 0 0 0 chr17 38883260 38883281 -56389370 + AT_rich Low_complexity Low_complexity 1 21 0 4 881 23 33 0 0 chr17 38883326 38883356 -56389295 + AT_rich Low_complexity Low_complexity 1 30 0 4 881 1131 213 20 0 chr17 38883367 38883621 -56389030 - Lx2 LINE L1 -578 6419 6161 4 881 1477 304 26 14 chr17 38883725 38884296 -56388355 - Lx7 LINE L1 -753 6943 6366 4 881 296 187 160 0 chr17 38884336 38884411 -56388240 - L1_Mus3 LINE L1 -297 6341 6255 4 881 2421 71 3 12 chr17 38884421 38884750 -56387901 + IAPEY2_LTR LTR ERVK 32 357 0 4 881 1725 152 33 17 chr17 38884771 38885072 -56387579 - L1_Mus3 LINE L1 -387 6251 5946 4 881 679 182 6 6 chr17 38885304 38885470 -56387181 + (TA)n Simple_repeat Simple_repeat 2 167 0 4 881 944 276 35 10 chr17 38886005 38886302 -56386349 - Lx3C LINE L1 -77 6981 6586 4 881 981 210 44 22 chr17 38886317 38886590 -56386061 + L1_Mur2 LINE L1 3649 3927 -1950 4 881 1448 108 0 0 chr17 38886591 38886794 -56385857 - L1_Mus1 LINE L1 -115 6452 6250 4 881 515 139 25 42 chr17 38886795 38886915 -56385736 + L1Md_F2 LINE L1 6459 6576 -6 4 881 201 108 0 0 chr17 38886973 38887010 -56385641 + (A)n Simple_repeat Simple_repeat 1 37 0 4 881 330 194 20 2 chr17 38887011 38887112 -56385539 + L1_Mur2 LINE L1 3921 4023 -1860 4 881 7704 53 21 3 chr17 38887162 38888273 -56384378 - L1Md_F3 LINE L1 0 6584 5452 4 881 298 368 40 0 chr17 38888343 38888468 -56384183 + Lx8 LINE L1 7111 7240 -233 4 881 579 287 0 0 chr17 38888905 38889072 -56383579 + URR1A DNA MER1_type 59 225 -1 4 881 764 312 96 55 chr17 38890857 38891471 -56381180 + Lx9 LINE L1 6538 7176 -468 4 881 488 276 181 49 chr17 38892487 38892857 -56379794 - MTC LTR MaLR -2 419 1 4 881 247 231 38 13 chr17 38892861 38892940 -56379711 - MTC-int LTR MaLR -4 1254 1174 4 881 2403 263 50 2 chr17 38893008 38893624 -56379027 + Lx4A LINE L1 6403 7048 -10 4 881 668 257 11 16 chr17 38893679 38893869 -56378782 + L1_Mur2 LINE L1 5522 5710 -167 4 881 519 371 55 25 chr17 38893886 38894594 -56378057 + Lx5 LINE L1 6488 7050 0 4 881 3058 273 41 11 chr17 38894645 38895483 -56377168 - MTC-int LTR MaLR -289 969 107 4 881 25 0 0 0 chr17 38895499 38895524 -56377127 + AT_rich Low_complexity Low_complexity 1 25 0 4 881 956 211 56 4 chr17 38895785 38896018 -56376633 - Lx LINE L1 0 6654 6410 4 881 26 0 0 0 chr17 38896241 38896267 -56376384 + AT_rich Low_complexity Low_complexity 1 26 0 4 881 966 116 0 27 chr17 38896290 38896426 -56376225 + B1_Mm SINE Alu 2 136 -11 4 881 198 0 0 0 chr17 38896426 38896448 -56376203 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 4 881 966 116 0 27 chr17 38896448 38896461 -56376190 + B1_Mm SINE Alu 137 147 0 4 881 270 0 0 0 chr17 38896514 38896544 -56376107 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 881 5244 157 34 8 chr17 38896794 38897712 -56374939 - Lx3A LINE L1 -8 6973 6032 4 881 5057 137 18 0 chr17 38898043 38898883 -56373768 - L1_Mus3 LINE L1 0 6638 5784 4 881 730 310 46 11 chr17 38899535 38899907 -56372744 - Lx2B LINE L1 -2 7056 6575 4 881 7693 227 40 23 chr17 38899914 38900536 -56372115 + Lx4A LINE L1 3660 4279 -1598 4 881 349 19 37 19 chr17 38900536 38900590 -56372061 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 4 881 7693 226 43 26 chr17 38900590 38902280 -56370371 + Lx4A LINE L1 4280 6008 -1042 4 881 1628 291 40 13 chr17 38902338 38902861 -56369790 - Lx5 LINE L1 -8 7042 6506 4 881 1034 120 6 0 chr17 38902865 38903040 -56369611 + (TCTCC)n Simple_repeat Simple_repeat 1 176 0 4 881 434 98 0 0 chr17 38903040 38903101 -56369550 - L1_Mus1 LINE L1 -253 6314 6254 4 881 7624 145 12 2 chr17 38903144 38904418 -56368233 - L1_Mm LINE L1 -568 5315 4029 4 881 4728 154 23 39 chr17 38904412 38904436 -56368215 + L1_Mm LINE L1 3111 3143 -2740 4 881 458 17 17 0 chr17 38904436 38904495 -56368156 + (CAAAA)n Simple_repeat Simple_repeat 2 61 0 4 881 4728 154 23 39 chr17 38904495 38905401 -56367250 + L1_Mm LINE L1 3144 4025 -1858 4 881 1250 282 30 13 chr17 38905396 38905794 -56366857 - Lx5 LINE L1 -529 6521 6117 4 881 2902 87 8 0 chr17 38908018 38908411 -56364240 - MTA_Mm LTR MaLR 0 396 1 4 881 438 108 175 41 chr17 38908422 38908519 -56364132 - MT-int LTR MaLR -75 1023 914 4 881 268 367 22 0 chr17 38908905 38909044 -56363607 - Lx8 LINE L1 -199 7274 7133 4 881 1111 241 28 0 chr17 38909191 38909481 -56363170 - L1_Mur2 LINE L1 -1175 4702 4405 4 881 5383 44 5 1 chr17 38909481 38910147 -56362504 - L1Md_A LINE L1 0 6582 5915 4 881 3341 19 0 0 chr17 38910150 38910569 -56362082 + L1Md_A LINE L1 5504 5922 -660 4 881 234 233 203 17 chr17 38910568 38910686 -56361965 - L1_Mur2 LINE L1 -1459 4418 4279 4 881 19143 71 1 1 chr17 38910687 38913896 -56358755 - L1Md_F2 LINE L1 -12 6570 3360 4 881 941 275 95 7 chr17 38913897 38914201 -56358450 - MTC LTR MaLR -77 344 14 4 881 481 337 11 0 chr17 38914255 38914442 -56358209 + ORR1B1-int LTR MaLR 25 213 -1296 4 881 1877 282 70 7 chr17 38914463 38915045 -56357606 + Lx4A LINE L1 6431 7049 -9 4 881 1884 290 67 15 chr17 38915067 38915971 -56356680 + Lx5 LINE L1 5495 6437 -613 4 881 709 341 47 51 chr17 38916041 38916640 -56356011 + Lx5 LINE L1 6461 7041 -9 4 881 3031 275 50 9 chr17 38916704 38917571 -56355080 - MTC-int LTR MaLR -288 970 69 4 881 233 104 14 56 chr17 38917641 38917712 -56354939 + A-rich Low_complexity Low_complexity 3 70 0 4 881 1134 305 6 45 chr17 38917713 38918067 -56354584 - MTB_Mm LTR MaLR -43 364 25 4 881 235 330 28 0 chr17 38918635 38918744 -56353907 - URR1B DNA MER1_type -1 224 113 4 881 7739 131 13 0 chr17 38918746 38919335 -56353316 + Lx3_Mus LINE L1 5314 5906 -1103 4 881 273 57 0 0 chr17 38919335 38919370 -56353281 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 4 881 7739 141 19 5 chr17 38919370 38920305 -56352346 + Lx3_Mus LINE L1 5907 6853 -156 4 881 336 233 62 76 chr17 38920293 38920508 -56352143 + Lx4A LINE L1 5709 5923 -1550 4 881 413 89 63 16 chr17 38920900 38921026 -56351625 + (TA)n Simple_repeat Simple_repeat 1 132 0 4 881 435 253 67 45 chr17 38921032 38921210 -56351441 - MTC-int LTR MaLR -1029 229 48 4 881 2803 290 62 16 chr17 38921210 38922259 -56350392 - Lx7 LINE L1 -347 7349 6253 4 881 207 0 0 0 chr17 38922260 38922283 -56350368 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 881 506 312 70 6 chr17 38922354 38922525 -56350126 - Lx6 LINE L1 -598 6862 6681 4 881 5136 173 28 15 chr17 38922580 38923582 -56349069 + Lx2 LINE L1 5982 6996 -1 4 881 580 288 14 75 chr17 38923671 38923949 -56348702 - ETnERV-int LTR ERVK -3051 263 3 4 881 581 96 32 0 chr17 38923952 38924046 -56348605 - RLTR9F LTR ERVK -4 411 315 4 881 2957 71 8 8 chr17 38924046 38924442 -56348209 - MTA_Mm LTR MaLR 0 396 1 4 881 4518 95 5 6 chr17 38924442 38925097 -56347554 - MTA_Mm-int LTR MaLR 0 1098 445 4 881 3136 59 5 0 chr17 38925097 38925488 -56347163 + MTA_Mm LTR MaLR 4 396 0 4 881 7593 137 26 14 chr17 38925490 38926870 -56345781 - MusHAL1 LINE L1 -370 2342 946 4 881 804 297 167 31 chr17 38926964 38927318 -56345333 - MTC LTR MaLR 0 421 20 4 881 557 294 43 5 chr17 38927882 38928070 -56344581 - URR1A DNA MER1_type -1 225 31 4 882 436 287 52 42 chr17 38928852 38929224 -56343427 + Lx8 LINE L1 5522 5895 -1578 4 882 26 0 0 0 chr17 38929330 38929356 -56343295 + AT_rich Low_complexity Low_complexity 1 26 0 4 882 450 0 0 0 chr17 38929671 38929721 -56342930 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 882 562 289 30 25 chr17 38929754 38929953 -56342698 - MTC-int LTR MaLR -1058 200 1 4 882 999 259 116 19 chr17 38929951 38930287 -56342364 - MTC LTR MaLR -2 419 37 4 882 1540 195 27 3 chr17 38930903 38931197 -56341454 + Lx3A LINE L1 6648 6948 -33 4 882 396 319 86 61 chr17 38931252 38931903 -56340748 - Lx7 LINE L1 -95 7601 6935 4 882 3960 178 53 21 chr17 38931915 38932726 -56339925 - Lx2 LINE L1 0 6997 6161 4 882 1588 294 45 25 chr17 38932830 38933501 -56339150 - Lx7 LINE L1 -753 6943 6260 4 882 1279 171 59 17 chr17 38933500 38933738 -56338913 - Lx LINE L1 -130 6524 6277 4 882 852 269 19 43 chr17 38933753 38934009 -56338642 + MTC LTR MaLR 164 413 -8 4 882 4322 136 15 1 chr17 38934023 38934710 -56337941 - L1_Mus3 LINE L1 0 6638 5943 4 882 186 43 0 0 chr17 38934909 38934932 -56337719 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 882 23 0 0 0 chr17 38935384 38935407 -56337244 + AT_rich Low_complexity Low_complexity 1 23 0 4 882 1000 268 19 15 chr17 38935438 38935700 -56336951 - Lx3C LINE L1 -128 6848 6586 4 882 7340 262 31 33 chr17 38935715 38939116 -56333535 + Lx5 LINE L1 3649 7050 0 5 882 1383 83 0 0 chr17 38939571 38939751 -56332900 + B2_Mm1a SINE B2 1 180 -13 5 882 8071 54 1 0 chr17 38939754 38940748 -56331903 - L1Md_F2 LINE L1 -1 6581 5587 5 882 327 25 0 0 chr17 38940773 38940813 -56331838 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 5 882 1152 80 6 11 chr17 38941986 38942164 -56330487 - L1Md_F2 LINE L1 0 6582 6406 5 882 2309 59 0 32 chr17 38942165 38942480 -56330171 + L1_Mm LINE L1 3776 4080 -1803 5 882 6997 60 35 3 chr17 38942775 38943943 -56328708 - L1Md_F2 LINE L1 0 6582 5406 5 882 568 306 53 0 chr17 38945496 38945702 -56326949 - URR1A DNA MER1_type -2 224 8 5 882 272 361 37 21 chr17 38946037 38946224 -56326427 - Lx8 LINE L1 -151 7322 7133 5 882 2917 218 25 26 chr17 38946371 38947169 -56325482 - L1_Mur2 LINE L1 -1175 4702 3906 5 882 882 259 168 29 chr17 38947149 38947393 -56325258 - L1_Mur2 LINE L1 -3675 2202 1896 5 882 671 188 6 25 chr17 38947393 38947551 -56325100 - L1_Mus4 LINE L1 -4 6632 6478 5 882 882 259 168 29 chr17 38947551 38947823 -56324828 - L1_Mur2 LINE L1 -3982 1895 1614 5 882 8270 198 36 10 chr17 38947822 38949842 -56322809 + L1_Mur2 LINE L1 3225 5295 -582 5 882 559 226 128 11 chr17 38949844 38950023 -56322628 + Lx4A LINE L1 6857 7056 -2 5 882 296 303 105 16 chr17 38950061 38950319 -56322332 - L1M2 LINE L1 -445 5855 5575 5 882 248 295 41 83 chr17 38950649 38950867 -56321784 - Lx7 LINE L1 -4 7692 7484 5 882 279 0 0 0 chr17 38950978 38951009 -56321642 + (T)n Simple_repeat Simple_repeat 1 31 0 5 882 29 0 0 0 chr17 38951100 38951129 -56321522 + AT_rich Low_complexity Low_complexity 1 29 0 5 882 730 315 83 5 chr17 38951135 38951508 -56321143 - Lx7 LINE L1 -368 7328 6927 5 882 5586 192 53 2 chr17 38951559 38953114 -56319537 - Lx2 LINE L1 -284 6713 5080 5 882 2734 183 37 3 chr17 38953120 38953746 -56318905 - Lx2 LINE L1 -1394 4483 3837 5 882 2584 124 5 33 chr17 38953759 38954295 -56318356 - RLTR13C1 LTR ERVK -97 936 311 5 882 693 290 47 31 chr17 38954309 38954732 -56317919 + L1_Mur2 LINE L1 1773 2202 -3675 5 882 1000 236 24 0 chr17 38954729 38954979 -56317672 + L1_Mur2 LINE L1 3925 4180 -1697 5 882 445 261 43 18 chr17 38954987 38955151 -56317500 + URR1A DNA MER1_type 51 218 -8 5 882 4610 167 17 44 chr17 38955695 38955981 -56316670 + RLTR22_Mur LTR ERVK 1 274 -1574 5 882 4942 67 3 15 chr17 38955981 38956632 -56316019 - L1_Mus2 LINE L1 -4 6562 5920 5 882 4610 167 17 44 chr17 38956632 38956678 -56315973 + RLTR22_Mur LTR ERVK 275 305 -1543 5 882 1040 99 0 0 chr17 38956678 38956820 -56315831 + B1_Mus1 SINE Alu 2 143 -5 5 882 4610 167 17 44 chr17 38956820 38957413 -56315238 + RLTR22_Mur LTR ERVK 306 902 -946 5 882 3272 208 2 0 chr17 38957414 38958040 -56314611 + L1_Mm LINE L1 5195 5821 -62 5 882 289 266 64 86 chr17 38958040 38958180 -56314471 + MTC-int LTR MaLR 88 224 -1034 5 882 600 27 0 0 chr17 38958187 38958261 -56314390 + (CA)n Simple_repeat Simple_repeat 1 74 0 5 882 469 324 24 19 chr17 38958718 38959097 -56313554 - Lx7 LINE L1 -1825 5871 5458 5 882 393 301 32 7 chr17 38959806 38959960 -56312691 + URR1A DNA MER1_type 68 225 -1 5 882 1090 328 48 20 chr17 38960498 38960893 -56311758 + MTC LTR MaLR 1 406 -15 5 882 461 215 98 58 chr17 38960912 38961085 -56311566 + MTC-int LTR MaLR 20 199 -1059 5 882 1635 214 16 10 chr17 38961086 38961469 -56311182 - L1_Mur2 LINE L1 -366 5511 5127 5 882 2565 190 75 5 chr17 38961482 38962095 -56310556 + MusHAL1 LINE L1 866 1521 -1191 5 882 582 312 33 30 chr17 38962109 38962413 -56310238 - Lx7 LINE L1 -1320 6376 6072 5 882 1013 284 73 20 chr17 38962552 38962894 -56309757 - MTC LTR MaLR -61 360 1 5 882 445 341 22 26 chr17 38962907 38963139 -56309512 + ORR1B1-int LTR MaLR 2 232 -1277 5 882 604 285 18 0 chr17 38963141 38963306 -56309345 + Lx4A LINE L1 6431 6598 -460 5 882 7223 150 21 12 chr17 38963315 38964833 -56307818 + L1_Mus2 LINE L1 5401 6973 -85 5 882 3983 228 17 36 chr17 38964857 38966001 -56306650 + Lx4B LINE L1 3712 4833 -1044 5 882 1445 259 38 3 chr17 38965998 38966482 -56306169 + Lx4B LINE L1 5405 5906 -1152 5 882 21 82 0 0 chr17 38967190 38967239 -56305412 + AT_rich Low_complexity Low_complexity 1 49 0 5 882 659 243 91 5 chr17 38969711 38969897 -56302754 - URR1A DNA MER1_type -1 225 24 5 882 296 376 78 21 chr17 38970242 38970435 -56302216 - Lx8 LINE L1 -150 7323 7120 5 882 1001 243 11 0 chr17 38970569 38970832 -56301819 - L1_Mur2 LINE L1 -1175 4702 4437 5 882 1639 209 11 6 chr17 38970847 38971207 -56301444 - Lx3A LINE L1 -4 6977 6616 5 882 4351 108 19 0 chr17 38971237 38971856 -56300795 - L1_Mus1 LINE L1 -1 6566 5936 5 882 282 271 152 0 chr17 38971857 38971975 -56300676 + Lx4A LINE L1 6923 7058 0 5 882 1082 103 0 0 chr17 38971981 38972127 -56300524 + B1_Mus1 SINE Alu 2 147 -1 5 882 210 130 101 0 chr17 38972372 38972441 -56300210 + (TTAA)n Simple_repeat Simple_repeat 4 79 0 5 882 197 163 20 0 chr17 38973012 38973061 -56299590 + A-rich Low_complexity Low_complexity 5 54 0 5 882 2952 230 20 15 chr17 38973180 38973961 -56298690 - L1_Mur2 LINE L1 -1202 4675 3891 5 882 1175 268 61 57 chr17 38973931 38974509 -56298142 - L1_Mur2 LINE L1 -3675 2202 1623 5 882 1029 239 7 7 chr17 38974512 38974782 -56297869 + Lx5 LINE L1 3224 3493 -2384 5 882 14065 41 4 0 chr17 38974792 38977205 -56295446 - L1Md_T LINE L1 0 6582 4162 5 882 433 38 0 0 chr17 38977205 38977258 -56295393 - L1_Mm LINE L1 -1308 4575 4523 5 882 1209 292 62 22 chr17 38977328 38977728 -56294923 - MTC LTR MaLR 0 421 6 5 882 1554 265 88 12 chr17 38977878 38978479 -56294172 + Lx4A LINE L1 6403 7049 -9 5 882 296 263 0 0 chr17 38978499 38978575 -56294076 + L1_Mur2 LINE L1 5495 5570 -307 5 882 681 321 79 11 chr17 38978575 38978955 -56293696 + L1VL2 LINE L1 9 399 -5936 5 882 1064 293 18 22 chr17 38979167 38979513 -56293138 - Lx3C LINE L1 -53 7005 6580 5 882 4390 226 26 19 chr17 38979515 38980803 -56291848 + Lx5 LINE L1 3643 4938 -939 5 882 2404 77 3 3 chr17 38980815 38981141 -56291510 - IAPEY2_LTR LTR ERVK 0 357 32 5 882 3423 86 56 0 chr17 38981151 38981883 -56290768 - IAPEY3-int LTR ERVK 0 7680 6908 5 882 699 101 10 0 chr17 38981885 38981984 -56290667 - IAPEY3-int LTR ERVK -4395 3285 3186 5 882 1594 52 0 0 chr17 38981976 38982170 -56290481 - IAPEY3-int LTR ERVK -2635 5045 4852 5 882 7601 88 5 7 chr17 38982163 38982907 -56289744 - IAPEY3-int LTR ERVK -4991 2689 1949 5 882 7879 43 9 2 chr17 38982907 38983858 -56288793 - RLTR13A2 LTR ERVK 0 958 1 5 882 7601 88 5 7 chr17 38983858 38984121 -56288530 - IAPEY3-int LTR ERVK -5732 1948 1684 5 882 457 246 159 21 chr17 38984177 38984362 -56288289 + RLTR10A LTR ERVK 147 361 -50 5 882 2687 31 3 0 chr17 38984362 38984684 -56287967 + L1Md_A LINE L1 6260 6582 0 5 882 457 246 159 21 chr17 38984684 38984731 -56287920 + RLTR10A LTR ERVK 362 410 -1 5 882 7283 143 17 10 chr17 38984731 38986040 -56286611 - IAPEY3-int LTR ERVK -5991 1689 22 5 882 2270 112 29 11 chr17 38986040 38986097 -56286554 - IAPEY2_LTR LTR ERVK 0 357 302 5 882 7179 58 3 4 chr17 38986097 38987025 -56285626 + L1Md_F2 LINE L1 5655 6581 -1 5 882 2270 112 29 11 chr17 38987025 38987318 -56285333 - IAPEY2_LTR LTR ERVK -56 301 1 5 882 3412 274 50 34 chr17 38987318 38989386 -56283265 + Lx5 LINE L1 4958 7048 -2 5 882 195 42 0 0 chr17 38989467 38989491 -56283160 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 5 882 4592 112 10 6 chr17 38989514 38990197 -56282454 + L1_Mus2 LINE L1 5877 6562 -4 5 882 460 16 47 0 chr17 38990204 38990268 -56282383 + (TAAAA)n Simple_repeat Simple_repeat 4 70 0 5 882 1133 64 0 0 chr17 38991373 38991513 -56281138 + B1_Mm SINE Alu 1 140 -7 5 882 537 281 52 19 chr17 38994244 38994454 -56278197 - URR1B DNA MER1_type -1 224 8 5 882 267 381 96 5 chr17 38994758 38994977 -56277674 - Lx8 LINE L1 -115 7358 7120 5 882 903 262 12 0 chr17 38995111 38995367 -56277284 - L1_Mur2 LINE L1 -1175 4702 4444 5 882 570 211 13 32 chr17 38995384 38995541 -56277110 - Lx3A LINE L1 -7 6974 6821 5 882 3173 97 35 0 chr17 38995556 38996010 -56276641 - L1_Mus1 LINE L1 0 6567 6098 5 882 3222 142 4 0 chr17 38996015 38996528 -56276123 + L1_Mm LINE L1 5235 5749 -134 5 882 1614 207 43 7 chr17 38996523 38996927 -56275724 - Lx3A LINE L1 -144 6837 6517 5 882 7753 62 5 0 chr17 38996925 38998532 -56274119 - L1Md_F2 LINE L1 -15 6567 4953 5 882 375 235 0 40 chr17 38998507 38998631 -56274020 - Lx3A LINE L1 -1834 4043 3925 5 882 760 254 87 32 chr17 38998626 38999184 -56273467 - Lx3A LINE L1 -3666 2214 1627 5 882 1035 178 9 0 chr17 38999192 38999405 -56273246 + L1_Mur2 LINE L1 3225 3439 -2438 5 882 701 252 29 10 chr17 38999414 38999622 -56273029 - URR1A DNA MER1_type 0 226 15 5 882 305 208 194 0 chr17 38999771 38999843 -56272808 + MTB_Mm LTR MaLR 184 269 -138 5 882 246 287 16 50 chr17 38999849 38999970 -56272681 - Lx8 LINE L1 -1698 5775 5659 5 882 274 284 19 10 chr17 39000040 39000143 -56272508 + Lx6 LINE L1 5790 5893 -1567 1 882 222 37 0 0 chr17 39000594 39000621 -56272030 + (GA)n Simple_repeat Simple_repeat 1 27 0 2 882 648 270 41 27 chr17 39000651 39000872 -56271779 - MTC-int LTR MaLR -1034 224 1 3 882 1081 262 131 12 chr17 39000870 39001214 -56271437 - MTC LTR MaLR -2 419 35 3 882 1865 164 26 0 chr17 39001827 39002139 -56270512 + Lx3A LINE L1 6650 6969 -12 4 882 519 341 62 37 chr17 39002215 39002919 -56269732 - Lx7 LINE L1 -40 7656 6935 5 882 3865 291 42 20 chr17 39003297 39004281 -56268370 - Lx5 LINE L1 0 7050 6029 6 882 216 0 0 0 chr17 39004281 39004305 -56268346 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 882 7482 233 52 23 chr17 39004305 39006621 -56266030 - Lx5 LINE L1 -1022 6028 3646 6 882 983 290 18 2 chr17 39006626 39006936 -56265715 + Lx2B LINE L1 6571 6980 -78 8 882 34361 61 2 21 chr17 39007485 39012809 -56259842 + L1Md_A LINE L1 365 5586 -297 9 882 8406 34 1 0 chr17 39012809 39013803 -56258848 + L1Md_A LINE L1 5587 6581 -1 9 882 24 32 0 0 chr17 39013843 39013874 -56258777 + AT_rich Low_complexity Low_complexity 1 31 0 1 882 4381 131 6 1 chr17 39015007 39015697 -56256954 + L1_Mus3 LINE L1 5946 6638 0 1 882 679 296 86 12 chr17 39015709 39015965 -56256686 - MTC LTR MaLR -8 413 139 1 882 1616 164 51 95 chr17 39015965 39016356 -56256295 + Lx LINE L1 6279 6652 -2 1 882 298 103 44 0 chr17 39016357 39016425 -56256226 + (TAAAAA)n Simple_repeat Simple_repeat 2 72 0 1 882 353 296 20 0 chr17 39016425 39016523 -56256128 - MTC LTR MaLR -321 100 1 1 882 367 274 81 19 chr17 39016526 39016686 -56255965 - MTC-int LTR MaLR -1 1257 1088 1 882 1952 321 37 9 chr17 39016688 39017787 -56254864 + Lx5 LINE L1 5500 6862 -598 1 882 350 74 19 0 chr17 39017840 39017894 -56254757 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 1 882 712 144 0 22 chr17 39017927 39018111 -56254540 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 882 301 175 70 0 chr17 39018118 39018175 -56254476 + Lx7 LINE L1 6254 6314 -1382 1 882 29577 122 12 3 chr17 39018199 39024291 -56248360 + L1_Mus1 LINE L1 414 6567 0 1 882 432 159 18 36 chr17 39024409 39024520 -56248131 + L1_Mus2 LINE L1 6457 6565 -1 2 882 637 234 0 0 chr17 39024547 39024671 -56247980 + B1_Mus2 SINE Alu 6 129 -18 2 882 23 33 0 0 chr17 39025534 39025564 -56247087 + AT_rich Low_complexity Low_complexity 1 30 0 2 882 839 260 21 14 chr17 39026592 39026873 -56245778 - MusHAL1 LINE L1 -2004 708 426 2 882 2682 204 50 17 chr17 39026882 39027665 -56244986 + L1_Mur2 LINE L1 3225 4033 -1844 2 882 35274 36 0 0 chr17 39027666 39033346 -56239305 + L1Md_T LINE L1 1 5589 -297 2 882 8891 7 0 5 chr17 39033346 39034347 -56238304 + L1Md_T LINE L1 5590 6585 0 2 882 984 224 24 0 chr17 39034353 39034603 -56238048 + L1_Mur2 LINE L1 4019 4274 -1603 2 882 35255 46 0 3 chr17 39034603 39039842 -56232809 + L1Md_T LINE L1 271 5589 -297 2 882 8922 6 0 4 chr17 39039842 39040842 -56231809 + L1Md_T LINE L1 5590 6585 0 2 882 996 220 24 0 chr17 39040843 39041093 -56231558 + L1_Mur2 LINE L1 4019 4274 -1603 2 882 34354 51 1 8 chr17 39041093 39046356 -56226295 + L1Md_T LINE L1 271 5589 -297 2 882 8380 39 0 0 chr17 39046356 39047352 -56225299 + L1Md_T LINE L1 5590 6585 0 2 882 2219 209 24 7 chr17 39047352 39047893 -56224758 + L1_Mur2 LINE L1 4271 4820 -1057 2 882 32973 111 15 11 chr17 39047896 39054422 -56218229 - L1Md_F2 LINE L1 -14 6568 66 2 882 1833 205 24 35 chr17 39054448 39054902 -56217749 + L1_Mur2 LINE L1 4845 5293 -584 2 882 458 246 156 12 chr17 39054894 39055067 -56217584 + Lx4A LINE L1 6841 7038 -20 3 882 2167 118 9 3 chr17 39055067 39055390 -56217261 - IAPEY2_LTR LTR ERVK 0 357 33 3 882 1002 122 0 13 chr17 39055441 39055590 -56217061 + B1_Mus1 SINE Alu 2 148 0 3 882 228 67 0 0 chr17 39055594 39055624 -56217027 + (GGAA)n Simple_repeat Simple_repeat 3 32 0 3 882 252 289 111 52 chr17 39055640 39055892 -56216759 - L1M2 LINE L1 -436 5864 5598 3 882 2512 129 29 0 chr17 39055942 39056323 -56216328 + MTB LTR MaLR 1 392 -8 3 882 694 296 44 18 chr17 39056548 39056823 -56215828 - L1_Mur3 LINE L1 -3973 1907 1626 3 882 5853 187 43 16 chr17 39056826 39058159 -56214492 + L1_Mur2 LINE L1 3225 4593 -1284 3 882 361 321 35 6 chr17 39058156 39058325 -56214326 - Lx7 LINE L1 -730 6966 6793 3 882 553 246 84 0 chr17 39058491 39058633 -56214018 - MTC LTR MaLR -67 354 201 3 882 1127 318 35 49 chr17 39058720 39059369 -56213282 + Lx7 LINE L1 5825 6464 -1232 4 110 395 230 52 19 chr17 39059386 39059541 -56213110 + Lx5 LINE L1 4450 4609 -1271 4 883 642 352 3 48 chr17 39060233 39060525 -56212126 + Lx5 LINE L1 6145 6423 -627 4 883 3652 278 41 29 chr17 39060522 39062197 -56210454 + Lx5 LINE L1 5345 7042 -8 4 883 4632 104 7 6 chr17 39062319 39063006 -56209645 + L1_Mus2 LINE L1 5875 6562 -4 4 883 5448 60 3 0 chr17 39064400 39065096 -56207555 - L1Md_F2 LINE L1 -15 6567 5870 4 883 705 24 0 0 chr17 39065726 39065809 -56206842 + (TA)n Simple_repeat Simple_repeat 1 83 0 4 883 303 71 0 0 chr17 39067299 39067341 -56205310 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 883 23 54 0 0 chr17 39067625 39067662 -56204989 + AT_rich Low_complexity Low_complexity 1 37 0 4 883 633 288 32 14 chr17 39067685 39067903 -56204748 - URR1A DNA MER1_type 0 226 5 4 883 365 393 20 5 chr17 39068196 39068398 -56204253 - Lx8 LINE L1 -149 7324 7120 4 883 908 254 11 0 chr17 39068526 39068786 -56203865 - L1_Mur2 LINE L1 -1176 4701 4439 5 883 204 125 0 0 chr17 39068791 39068823 -56203828 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 5 883 2220 183 31 22 chr17 39068824 39069276 -56203375 - Lx3A LINE L1 -9 6972 6517 5 883 753 250 11 17 chr17 39069278 39069453 -56203198 - L1_Mur2 LINE L1 -1803 4074 3901 5 883 1262 242 86 51 chr17 39069423 39069994 -56202657 - L1_Mur2 LINE L1 -3673 2204 1614 5 883 6053 181 50 79 chr17 39069993 39070009 -56202642 + L1_Mur2 LINE L1 3225 3240 -2637 5 883 207 0 0 0 chr17 39070009 39070032 -56202619 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 5 883 6053 181 50 79 chr17 39070032 39071394 -56201257 + L1_Mur2 LINE L1 3241 4607 -1270 5 883 2924 96 7 2 chr17 39071394 39071813 -56200838 - BGLII LTR ERVK 0 421 1 5 883 6053 181 50 79 chr17 39071813 39072142 -56200509 + L1_Mur2 LINE L1 4608 4883 -994 5 883 193 0 0 86 chr17 39072312 39072347 -56200304 + (CAAAAA)n Simple_repeat Simple_repeat 3 34 0 5 883 810 0 0 0 chr17 39072642 39072732 -56199919 + (TTC)n Simple_repeat Simple_repeat 2 91 0 5 883 2139 148 26 8 chr17 39072850 39073231 -56199420 + L1_Mur2 LINE L1 4875 5262 -615 5 883 344 191 45 45 chr17 39073257 39073345 -56199306 + Lx4A LINE L1 6885 6972 -86 5 883 36 53 0 0 chr17 39073345 39073402 -56199249 + AT_rich Low_complexity Low_complexity 1 57 0 5 883 868 103 73 7 chr17 39073755 39073892 -56198759 + B1_Mus2 SINE Alu 2 147 0 6 883 1025 103 7 0 chr17 39073972 39074118 -56198533 - B1_Mus1 SINE Alu 0 148 2 6 883 262 62 0 59 chr17 39074465 39074516 -56198135 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 6 883 303 254 216 43 chr17 39074773 39075028 -56197623 + L1MD LINE L1 4256 4554 -1592 6 883 30 27 0 0 chr17 39075461 39075498 -56197153 + AT_rich Low_complexity Low_complexity 1 37 0 6 883 203 263 29 22 chr17 39075625 39075761 -56196890 + (TA)n Simple_repeat Simple_repeat 2 138 0 6 883 1096 303 92 36 chr17 39076007 39076701 -56195950 - Lx7 LINE L1 -162 7534 6802 6 883 1483 292 28 43 chr17 39076746 39077390 -56195261 - Lx7 LINE L1 -1235 6461 5828 6 883 260 111 0 18 chr17 39077423 39077478 -56195173 + (CAAA)n Simple_repeat Simple_repeat 3 56 0 6 883 1261 255 68 43 chr17 39077483 39077852 -56194799 - MTC LTR MaLR -43 378 1 6 883 1703 124 0 4 chr17 39077866 39078116 -56194535 - Lx3A LINE L1 -289 6692 6444 6 883 1409 150 75 4 chr17 39078118 39078385 -56194266 + Lx3A LINE L1 6695 6980 -1 6 883 693 299 9 0 chr17 39078441 39078652 -56193999 + ORR1B1-int LTR MaLR 21 233 -1276 7 883 2181 263 40 12 chr17 39078653 39079026 -56193625 + Lx4A LINE L1 6431 6814 -244 7 883 5144 163 49 7 chr17 39079026 39079945 -56192706 - RMER17B LTR ERVK 0 958 1 7 883 2181 263 40 12 chr17 39079945 39080172 -56192479 + Lx4A LINE L1 6815 7048 -10 7 883 1026 227 94 14 chr17 39080192 39080469 -56192182 + Lx6 LINE L1 5495 5793 -84 7 883 12092 147 49 20 chr17 39080469 39083521 -56189130 + Lx3_Mus LINE L1 63 3628 -2258 7 883 7945 144 25 95 chr17 39083519 39085531 -56187120 + Lx3_Mus LINE L1 5200 7009 0 7 883 469 232 62 45 chr17 39085522 39085698 -56186953 + Lx6 LINE L1 5778 5956 -1504 7 883 3728 72 3 2 chr17 39085672 39086301 -56186350 + L1VL1 LINE L1 1115 1731 -4152 7 883 2260 112 52 14 chr17 39086301 39086664 -56185987 + L1Md_F2 LINE L1 6194 6570 -12 7 883 918 347 39 42 chr17 39086699 39087838 -56184813 + Lx5 LINE L1 5999 7042 -8 7 883 3125 265 44 15 chr17 39087904 39088792 -56183859 - MTC-int LTR MaLR -289 969 56 7 883 8539 137 34 16 chr17 39088793 39090305 -56182346 - L1_Mur1 LINE L1 -414 5472 3933 7 883 1353 210 22 28 chr17 39090337 39090622 -56182029 + Lx3A LINE L1 6657 6946 -35 8 883 2920 81 2 5 chr17 39090622 39091019 -56181632 + MTA_Mm LTR MaLR 1 396 0 8 883 1353 210 22 28 chr17 39091019 39091040 -56181611 + Lx3A LINE L1 6947 6965 -16 8 883 216 0 0 0 chr17 39091040 39091064 -56181587 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 8 883 1353 210 22 28 chr17 39091064 39091075 -56181576 + Lx3A LINE L1 6966 6973 -8 8 883 564 341 25 30 chr17 39091885 39092248 -56180403 + L1_Rod LINE L1 5476 5836 -11 8 883 451 242 73 7 chr17 39092322 39092472 -56180179 - MTC-int LTR MaLR -1098 160 1 7 883 596 320 159 6 chr17 39092474 39092809 -56179842 - MTC LTR MaLR -8 411 35 7 883 300 258 10 20 chr17 39093401 39093500 -56179151 - URR1B DNA MER1_type -1 224 127 8 883 841 300 56 77 chr17 39093623 39094338 -56178313 - Lx7 LINE L1 -57 7639 6940 8 883 489 153 107 9 chr17 39094357 39094469 -56178182 - Lx2 LINE L1 0 6997 6875 8 883 1042 274 14 12 chr17 39094458 39094802 -56177849 - L1_Mur2 LINE L1 -34 5843 5499 8 883 439 279 74 12 chr17 39094802 39094965 -56177686 + MTC-int LTR MaLR 1086 1258 0 8 883 1104 267 106 13 chr17 39094967 39095343 -56177308 + MTC LTR MaLR 3 413 -8 8 883 453 36 0 0 chr17 39095563 39095618 -56177033 + (TA)n Simple_repeat Simple_repeat 2 56 0 8 883 24 53 0 0 chr17 39095682 39095720 -56176931 + AT_rich Low_complexity Low_complexity 1 38 0 9 883 24 32 0 0 chr17 39096945 39096976 -56175675 + AT_rich Low_complexity Low_complexity 1 31 0 9 883 932 299 31 3 chr17 39096998 39097322 -56175329 - Lx2B LINE L1 -58 7000 6571 9 883 5711 226 25 36 chr17 39097323 39098034 -56174617 + L1_Mur2 LINE L1 3647 4378 -1499 9 883 2974 96 32 9 chr17 39098034 39098474 -56174177 + L1Md_F2 LINE L1 6132 6581 -1 9 883 5711 226 25 36 chr17 39098474 39099413 -56173238 + L1_Mur2 LINE L1 4379 5279 -598 9 883 189 0 0 0 chr17 39099413 39099434 -56173217 + (A)n Simple_repeat Simple_repeat 1 21 0 9 883 1933 155 11 8 chr17 39099443 39099795 -56172856 + Lx3B LINE L1 5892 6244 -729 9 883 26802 96 4 7 chr17 39099772 39102954 -56169697 + L1_Mm LINE L1 1459 4630 -1253 9 883 333 0 0 0 chr17 39102954 39102991 -56169660 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 9 883 26802 96 4 7 chr17 39102991 39103707 -56168944 + L1_Mm LINE L1 4631 5347 -536 9 883 6022 55 0 0 chr17 39103710 39104455 -56168196 + L1Md_F2 LINE L1 5824 6568 -14 9 883 780 11 0 0 chr17 39104456 39104545 -56168106 + (TA)n Simple_repeat Simple_repeat 2 90 0 1 883 625 290 33 58 chr17 39104713 39105108 -56167543 - Lx7 LINE L1 -1486 6210 5826 8 883 472 309 75 1 chr17 39105174 39105359 -56167292 - MTB_Mm LTR MaLR -29 378 182 1 883 208 0 62 0 chr17 39105371 39105403 -56167248 + (GTTTG)n Simple_repeat Simple_repeat 2 35 0 1 883 618 312 40 36 chr17 39105433 39105656 -56166995 - MTB_Mm LTR MaLR -183 224 1 1 883 624 279 59 31 chr17 39105687 39105942 -56166709 + ORR1D-int LTR MaLR 17 278 -1092 1 883 282 167 97 32 chr17 39106505 39106567 -56166084 - Lx6 LINE L1 -1003 6457 6392 1 883 6161 154 17 17 chr17 39106587 39107644 -56165007 - Lx LINE L1 -7 6647 5591 1 883 557 158 16 5 chr17 39108071 39108182 -56164469 - B1_Mus1 SINE Alu -8 112 1 1 883 298 265 63 71 chr17 39108182 39108218 -56164433 - MT2B LTR ERVL -444 157 123 1 883 1827 255 56 10 chr17 39108658 39109280 -56163371 + L1_Mur3 LINE L1 3969 4619 -1261 1 883 687 25 0 0 chr17 39109979 39110060 -56162591 + (TTTC)n Simple_repeat Simple_repeat 4 84 0 1 883 6886 162 9 19 chr17 39110074 39112098 -56160553 - L1_Mus3 LINE L1 -8 6630 4631 1 883 1979 256 67 11 chr17 39112114 39112727 -56159924 + Lx4A LINE L1 6403 7049 -9 1 883 21 0 0 0 chr17 39112727 39112748 -56159903 + AT_rich Low_complexity Low_complexity 1 21 0 1 883 1438 142 11 22 chr17 39112914 39113181 -56159470 - L1_Mm LINE L1 -83 5800 5537 1 883 987 169 0 181 chr17 39113175 39113479 -56159172 + L1_Mm LINE L1 5300 5548 -335 1 883 38336 20 1 6 chr17 39113493 39119857 -56152794 - L1Md_A LINE L1 0 6582 254 1 883 310 223 18 80 chr17 39119858 39119970 -56152681 - MTC-int LTR MaLR -1102 156 52 1 883 854 330 39 78 chr17 39120009 39120330 -56152321 - MTC LTR MaLR -31 390 54 1 883 1756 204 93 85 chr17 39120330 39120859 -56151792 + RMER16 LTR ERVK 1 533 0 1 883 709 330 39 78 chr17 39120859 39120898 -56151753 - MTC LTR MaLR -343 53 23 1 883 4492 82 3 2 chr17 39121080 39121666 -56150985 + LTRIS_Mus LTR ERV1 1 587 0 1 883 423 83 0 0 chr17 39122001 39122061 -56150590 - L1_Mm LINE L1 -1452 4431 4372 1 883 8971 150 14 92 chr17 39122058 39124886 -56147765 + L1Md_F2 LINE L1 3203 5579 -298 1 883 6748 110 5 1 chr17 39124887 39125869 -56146782 + L1Md_F2 LINE L1 5587 6572 -10 1 883 256 225 14 87 chr17 39126038 39126188 -56146463 - Lx7 LINE L1 -1494 5966 5823 1 883 829 255 69 25 chr17 39126287 39126532 -56146119 - MTC LTR MaLR -61 360 105 1 883 216 272 12 24 chr17 39126874 39126885 -56145766 + polypyrimidine Low_complexity Low_complexity 73 83 0 1 883 1551 11 0 0 chr17 39126885 39127062 -56145589 + (TTC)n Simple_repeat Simple_repeat 2 178 0 1 883 216 272 12 24 chr17 39127062 39127133 -56145518 + CT-rich Low_complexity Low_complexity 2 72 0 1 883 1633 239 101 0 chr17 39128307 39128889 -56143762 + Lx5 LINE L1 3969 4609 -1271 1 883 272 343 28 0 chr17 39129415 39129593 -56143058 + Lx9 LINE L1 6821 7003 -641 1 883 2365 136 26 0 chr17 39129607 39129996 -56142655 - Lx3_Mus LINE L1 -66 6943 6545 1 883 1130 290 52 16 chr17 39130819 39131204 -56141447 - MTC LTR MaLR -2 419 21 1 883 1718 263 86 34 chr17 39131359 39131977 -56140674 + Lx4A LINE L1 6403 7052 -6 1 883 2083 146 49 23 chr17 39131991 39132377 -56140274 + Lx LINE L1 6251 6646 -8 1 883 1971 309 95 27 chr17 39132462 39133907 -56138744 + Lx5 LINE L1 5505 7042 -8 1 883 1956 203 95 62 chr17 39133987 39134849 -56137802 + RMER17A LTR ERVK 1 887 -2 1 883 3056 248 67 44 chr17 39134850 39135774 -56136877 - MTC-int LTR MaLR -290 968 24 1 883 1090 314 56 20 chr17 39135796 39136186 -56136465 - MTC LTR MaLR -4 417 14 1 883 37163 35 1 6 chr17 39136334 39142513 -56130138 - L1Md_T LINE L1 0 6582 440 1 883 521 269 23 46 chr17 39142977 39143152 -56129499 - URR1A DNA MER1_type -2 224 54 1 883 469 284 75 5 chr17 39143995 39144294 -56128357 + Lx7 LINE L1 5548 5895 -1801 1 883 612 284 60 13 chr17 39144743 39144978 -56127673 - MTC-int LTR MaLR -1012 246 1 1 883 1097 262 167 6 chr17 39144976 39145318 -56127333 - MTC LTR MaLR -2 419 23 1 883 234 307 28 35 chr17 39145888 39146033 -56126618 - URR1B DNA MER1_type -1 224 81 1 883 840 302 55 63 chr17 39146093 39146842 -56125809 - Lx7 LINE L1 -19 7677 6935 1 883 2076 197 45 2 chr17 39146855 39147324 -56125327 - Lx2 LINE L1 0 6997 6509 1 883 678 254 27 110 chr17 39147347 39147728 -56124923 + RLTR46 LTR ERVK 1 357 0 1 883 289 218 152 13 chr17 39148225 39148304 -56124347 + RLTR1B-int LTR ERV1 836 925 -2374 1 883 316 211 133 82 chr17 39148565 39148761 -56123890 + ETnERV2-int LTR ERVK 1170 1326 -6080 1 883 286 183 17 0 chr17 39148821 39148881 -56123770 + MMERVK10C-int LTR ERVK 1089 1149 -4257 1 883 647 212 0 0 chr17 39148892 39149029 -56123622 + MMERVK10C-int LTR ERVK 1924 2060 -5521 1 883 1535 93 269 7 chr17 39149051 39149627 -56123024 + MMERVK10C-int LTR ERVK 2204 2929 -4652 1 883 4630 133 3 13 chr17 39149627 39149957 -56122694 + MMERVK10C-int LTR ERVK 3058 3385 -4196 1 883 3464 25 2 0 chr17 39149957 39150352 -56122299 - MTA_Mm LTR MaLR 0 396 1 1 883 4630 133 3 13 chr17 39150352 39150784 -56121867 + MMERVK10C-int LTR ERVK 3386 3812 -3769 1 883 17409 179 20 13 chr17 39150778 39154119 -56118532 - IAPEY3-int LTR ERVK -4069 3611 246 1 883 291 276 62 54 chr17 39154450 39154580 -56118071 - IAPEY2_LTR LTR ERVK 0 357 227 1 883 3771 224 40 36 chr17 39154581 39155926 -56116725 + IAPEY3-int LTR ERVK 6153 7680 0 1 883 685 250 38 121 chr17 39155926 39156306 -56116345 + RLTR46 LTR ERVK 1 357 0 1 883 1779 187 3 0 chr17 39156306 39156643 -56116008 - Lx2 LINE L1 -495 6502 6165 1 883 357 62 0 0 chr17 39156645 39156693 -56115958 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 1 883 438 326 11 6 chr17 39156718 39156900 -56115751 - Lx7 LINE L1 -751 6945 6763 1 883 1058 105 6 12 chr17 39156906 39157079 -56115572 + L1_Mus2 LINE L1 6395 6566 0 1 883 181 0 0 65 chr17 39157093 39157124 -56115527 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 883 1349 291 68 8 chr17 39157124 39157623 -56115028 - Lx7 LINE L1 -915 6781 6253 1 883 549 0 0 0 chr17 39157631 39157692 -56114959 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 883 477 0 0 0 chr17 39157692 39157744 -56114907 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 883 458 296 97 5 chr17 39157821 39158028 -56114623 - Lx6 LINE L1 -605 6855 6630 1 883 983 80 66 0 chr17 39158866 39159003 -56113648 + B1_Mus2 SINE Alu 2 147 0 1 883 456 264 51 19 chr17 39159171 39159329 -56113322 - URR1A DNA MER1_type -1 225 63 1 883 371 301 16 45 chr17 39160140 39160436 -56112215 + Lx7 LINE L1 5501 5819 -1877 1 883 1938 93 2 281 chr17 39160440 39160932 -56111719 + RLTR10D LTR ERVK 1 355 -4 1 883 6604 79 17 2 chr17 39160938 39161844 -56110807 + IAP-d-int LTR ERVK 3 921 -5621 1 883 11758 71 2 0 chr17 39161837 39163391 -56109260 + IAP-d-int LTR ERVK 4986 6542 0 1 883 2477 98 3 84 chr17 39163391 39163782 -56108869 + RLTR10D LTR ERVK 1 359 0 1 883 485 259 69 23 chr17 39164319 39164493 -56108158 - MTC-int LTR MaLR -1012 246 65 1 883 1045 311 59 21 chr17 39164493 39165103 -56107548 - Lx5 LINE L1 -826 6224 5592 1 883 639 244 17 23 chr17 39165103 39165279 -56107372 + MTC LTR MaLR 246 420 -1 1 883 22 0 0 0 chr17 39165546 39165568 -56107083 + AT_rich Low_complexity Low_complexity 1 22 0 1 883 456 86 0 0 chr17 39165568 39165638 -56107013 + (CA)n Simple_repeat Simple_repeat 2 71 0 1 883 27 29 0 0 chr17 39166951 39166985 -56105666 + AT_rich Low_complexity Low_complexity 1 34 0 1 883 947 271 9 10 chr17 39167027 39167313 -56105338 - Lx2B LINE L1 -95 6878 6597 1 883 8492 226 10 26 chr17 39167340 39168981 -56103670 + Lx5 LINE L1 3647 5252 -625 1 883 3001 166 32 11 chr17 39168981 39169535 -56103116 + Lx LINE L1 6089 6654 0 1 883 8492 267 22 23 chr17 39169535 39171219 -56101432 + Lx5 LINE L1 5253 6952 -98 1 883 333 189 0 0 chr17 39171265 39171360 -56101291 + (CATA)n Simple_repeat Simple_repeat 2 96 0 1 883 2722 25 0 0 chr17 39171743 39172059 -56100592 + L1Md_A LINE L1 5271 5586 -297 1 883 8232 38 1 0 chr17 39172059 39173053 -56099598 + L1Md_A LINE L1 5587 6581 -1 1 883 3486 78 12 62 chr17 39173306 39173825 -56098826 + MT2_Mm LTR ERVL 1 493 0 1 883 7225 142 19 62 chr17 39176995 39178374 -56094277 - RLTR22_Mur LTR ERVK 0 1848 530 1 883 5717 135 11 1 chr17 39178424 39179328 -56093323 + L1_Mus4 LINE L1 5713 6625 -11 1 883 621 27 0 0 chr17 39179342 39179417 -56093234 + (GAAAA)n Simple_repeat Simple_repeat 2 76 0 1 883 279 0 0 0 chr17 39179617 39179648 -56093003 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 883 266 0 0 29 chr17 39180023 39180058 -56092593 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 883 1574 260 71 3 chr17 39180634 39181089 -56091562 + L1_Mur3 LINE L1 3969 4458 -1422 1 883 726 34 0 0 chr17 39181089 39181178 -56091473 + (GAA)n Simple_repeat Simple_repeat 3 91 0 1 883 1574 260 71 3 chr17 39181178 39181316 -56091335 + L1_Mur3 LINE L1 4459 4602 -1278 1 883 26 30 0 0 chr17 39181336 39181369 -56091282 + AT_rich Low_complexity Low_complexity 1 33 0 1 883 802 132 2 0 chr17 39181369 39181503 -56091148 - B1_Mus2 SINE Alu -2 147 11 1 883 12990 117 5 3 chr17 39181509 39184305 -56088346 + L1_Mus1 LINE L1 3764 6565 -2 1 883 21 0 0 0 chr17 39184791 39184812 -56087839 + AT_rich Low_complexity Low_complexity 1 21 0 1 883 473 66 79 0 chr17 39184812 39184888 -56087763 + B1_Mus2 SINE Alu 1 82 -65 1 883 364 176 0 0 chr17 39184946 39185020 -56087631 - L1_Mur2 LINE L1 -3852 2025 1952 1 883 21 0 0 0 chr17 39185719 39185740 -56086911 + AT_rich Low_complexity Low_complexity 1 21 0 1 883 1236 291 52 10 chr17 39186021 39186423 -56086228 - MTC LTR MaLR 0 421 3 1 883 227 306 14 0 chr17 39186425 39186497 -56086154 - MTC-int LTR MaLR 0 1258 1186 1 883 945 202 27 126 chr17 39186511 39186683 -56085968 + RLTR22_Mur LTR ERVK 1 150 -1698 1 883 909 144 7 0 chr17 39186683 39186822 -56085829 - B1_Mus1 SINE Alu -6 142 3 1 883 945 202 27 126 chr17 39186822 39186910 -56085741 + RLTR22_Mur LTR ERVK 151 235 -1613 1 883 2230 297 68 35 chr17 39186911 39188551 -56084100 + Lx5 LINE L1 5504 7246 -214 1 883 3327 289 13 17 chr17 39188602 39189581 -56083070 - MTC-int LTR MaLR -282 976 2 1 883 693 306 91 88 chr17 39189580 39190000 -56082651 - MTC LTR MaLR 0 421 1 1 883 369 0 0 0 chr17 39190007 39190048 -56082603 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 884 303 281 49 35 chr17 39190594 39190738 -56081913 - URR1A DNA MER1_type -6 220 75 1 884 365 327 74 48 chr17 39191447 39191826 -56080825 + L1_Mur3 LINE L1 5473 5861 -19 1 884 403 18 36 0 chr17 39191871 39191927 -56080724 + (TTA)n Simple_repeat Simple_repeat 2 59 0 1 884 773 144 15 0 chr17 39191930 39192062 -56080589 - B1_Mus1 SINE Alu -13 135 2 1 884 348 149 54 0 chr17 39192124 39192198 -56080453 - L1Md_F3 LINE L1 -4 6580 6503 1 884 22419 141 15 3 chr17 39192198 39192647 -56080004 - L1Md_F LINE L1 -772 5111 4633 1 884 201 74 0 0 chr17 39192647 39192674 -56079977 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 884 22419 148 16 16 chr17 39192674 39196794 -56075857 - L1Md_F LINE L1 -1251 4632 531 1 884 1481 245 45 33 chr17 39196945 39197610 -56075041 + RLTR20D LTR ERVK 3 568 0 1 884 184 72 23 45 chr17 39197765 39197809 -56074842 + (CAAAAA)n Simple_repeat Simple_repeat 2 44 0 1 884 975 219 124 9 chr17 39198435 39198678 -56073973 + RLTR20D LTR ERVK 194 504 -64 2 884 387 0 0 0 chr17 39198678 39198721 -56073930 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 884 373 349 39 61 chr17 39198721 39198785 -56073866 + RLTR20D LTR ERVK 505 568 0 2 884 228 333 46 33 chr17 39198813 39198965 -56073686 - Lx9 LINE L1 -1149 6495 6342 2 884 378 0 0 0 chr17 39198974 39199016 -56073635 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 884 499 266 76 53 chr17 39199888 39200059 -56072592 + ETnERV2-int LTR ERVK 1351 1482 -5924 2 884 210 150 0 0 chr17 39200059 39200099 -56072552 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 2 884 5396 192 41 44 chr17 39200100 39201745 -56070906 + ETnERV2-int LTR ERVK 844 3446 -3960 2 884 19141 112 39 29 chr17 39202002 39204960 -56067691 + ETnERV2-int LTR ERVK 3441 6429 -977 2 884 354 128 0 49 chr17 39205048 39205129 -56067522 + RLTR45-int LTR ERVK 6009 6072 -1172 2 884 1599 130 8 4 chr17 39205129 39205376 -56067275 + ETnERV3-int LTR ERVK 5529 5776 -32 2 884 1372 187 158 8 chr17 39205395 39205864 -56066787 + RLTR13D6 LTR ERVK 1 539 -363 2 884 400 114 42 14 chr17 39205864 39205935 -56066716 + ETnERV2-int LTR ERVK 7331 7403 -3 2 884 2619 115 10 10 chr17 39205939 39206336 -56066315 + RLTR9E LTR ERVK 1 397 -12 2 884 273 75 0 0 chr17 39206359 39206399 -56066252 + (CAAAA)n Simple_repeat Simple_repeat 3 42 0 2 884 203 0 0 36 chr17 39206474 39206502 -56066149 + (ATATG)n Simple_repeat Simple_repeat 2 28 0 2 884 4380 254 10 2 chr17 39206502 39207524 -56065127 - Lx2B LINE L1 -6 6994 5965 2 884 487 206 28 14 chr17 39207526 39207692 -56064959 + L1_Mm LINE L1 2036 2206 -3680 2 884 435 73 158 0 chr17 39207709 39207791 -56064860 - L1_Mus1 LINE L1 0 6567 6473 2 884 5529 68 8 1 chr17 39207986 39208712 -56063939 + L1_Mus1 LINE L1 5837 6567 0 2 884 748 306 22 0 chr17 39208727 39208956 -56063695 - ORR1B1-int LTR MaLR -1266 243 10 2 884 1089 242 66 33 chr17 39208989 39209148 -56063503 + MTB_Mm LTR MaLR 9 182 -225 2 884 324 64 0 0 chr17 39209148 39209195 -56063456 + (CTAA)n Simple_repeat Simple_repeat 3 49 0 2 884 1089 242 66 33 chr17 39209195 39209338 -56063313 + MTB_Mm LTR MaLR 183 320 -87 2 884 720 321 8 0 chr17 39209348 39209585 -56063066 + MTC-int LTR MaLR 231 469 -789 2 884 22 70 0 0 chr17 39209965 39210008 -56062643 + AT_rich Low_complexity Low_complexity 1 43 0 2 884 784 245 67 19 chr17 39210201 39210409 -56062242 + URR1A DNA MER1_type 8 225 -1 2 884 643 237 72 0 chr17 39214759 39214898 -56057753 + B1_Mur4 SINE Alu 1 149 -1 2 884 264 284 190 22 chr17 39214999 39215136 -56057515 + RLTR22_Mur LTR ERVK 1689 1848 0 2 884 262 83 27 40 chr17 39215493 39215568 -56057083 + (CAAAA)n Simple_repeat Simple_repeat 2 75 0 2 884 6589 123 5 24 chr17 39215579 39216964 -56055687 + L1_Mus2 LINE L1 5220 6566 0 2 884 268 64 19 130 chr17 39217304 39217358 -56055293 + RLTR15 LTR ERVK 1 48 -311 2 884 1158 154 157 4 chr17 39217392 39217640 -56055011 + RLTR15 LTR ERVK 38 323 -36 2 884 305 319 41 59 chr17 39217918 39218088 -56054563 + RNLTR23 LTR ERVK 476 642 0 2 884 990 270 27 30 chr17 39218266 39218598 -56054053 + RNERVK23-int LTR ERVK 171 501 -7716 2 884 4182 261 8 23 chr17 39219012 39219590 -56053061 + RNERVK23-int LTR ERVK 4906 5483 -2734 2 884 2262 132 74 123 chr17 39219590 39220101 -56052550 + RLTR44D LTR ERVK 1 486 0 2 884 4182 261 8 23 chr17 39220101 39220594 -56052057 + RNERVK23-int LTR ERVK 5484 5961 -2256 2 884 922 278 109 10 chr17 39220596 39220719 -56051932 + RNERVK23-int LTR ERVK 7460 7582 -635 2 884 1058 63 7 0 chr17 39220719 39220862 -56051789 + (GA)n Simple_repeat Simple_repeat 1 144 0 2 884 922 278 109 10 chr17 39220862 39221050 -56051601 + RNERVK23-int LTR ERVK 7583 7802 -415 2 884 237 33 0 0 chr17 39221070 39221100 -56051551 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 884 243 284 57 49 chr17 39221865 39221987 -56050664 + RNLTR23 LTR ERVK 479 601 -41 2 884 2145 230 47 0 chr17 39222689 39223197 -56049454 - Lx4A LINE L1 -411 6647 6116 2 884 1709 256 34 7 chr17 39223208 39223621 -56049030 + Lx4A LINE L1 6634 7057 -1 2 884 2355 217 23 11 chr17 39223831 39224450 -56048201 - L1_Mur3 LINE L1 -3908 1972 1347 2 884 651 344 37 20 chr17 39224445 39224795 -56047856 + L1_Mur3 LINE L1 504 859 -6853 2 884 2768 185 6 0 chr17 39224803 39225301 -56047350 + Lx2 LINE L1 6066 6566 -431 2 884 231 235 14 29 chr17 39225340 39225410 -56047241 + T-rich Low_complexity Low_complexity 2 70 0 2 884 21 36 0 0 chr17 39225870 39225898 -56046753 + AT_rich Low_complexity Low_complexity 1 28 0 2 884 4046 193 16 12 chr17 39226116 39226892 -56045759 - Lx3B LINE L1 -396 6577 5799 2 884 442 220 0 0 chr17 39226891 39226991 -56045660 - L1_Mur2 LINE L1 -4265 1612 1513 2 884 227 31 0 30 chr17 39227023 39227056 -56045595 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 2 884 963 126 0 0 chr17 39227056 39227191 -56045460 - B1_Mm SINE Alu -12 135 1 2 884 207 0 0 0 chr17 39227287 39227310 -56045341 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 884 240 334 0 4 chr17 39227899 39227998 -56044653 + MTC LTR MaLR 272 369 -38 2 884 505 361 36 25 chr17 39228002 39228617 -56044034 - Lx5 LINE L1 -214 7246 6450 2 884 735 326 19 41 chr17 39228621 39228938 -56043713 + MTB_Mm LTR MaLR 88 397 -10 2 884 23 0 0 0 chr17 39229461 39229484 -56043167 + AT_rich Low_complexity Low_complexity 1 23 0 2 884 183 42 0 0 chr17 39231029 39231053 -56041598 + (CAAAAA)n Simple_repeat Simple_repeat 3 26 0 2 884 1994 272 34 11 chr17 39232993 39233524 -56039127 - Lx2B LINE L1 -3 6997 6455 2 884 698 308 0 5 chr17 39234369 39234581 -56038070 - URR1A DNA MER1_type -15 211 1 2 884 251 386 30 18 chr17 39234908 39235074 -56037577 - Lx8 LINE L1 -194 7279 7112 2 884 478 254 138 1 chr17 39235628 39235774 -56036877 - MTD LTR MaLR -58 361 197 2 884 593 80 11 0 chr17 39235774 39235862 -56036789 + (TG)n Simple_repeat Simple_repeat 2 90 0 2 884 253 362 67 30 chr17 39235862 39235880 -56036771 - MTD LTR MaLR -211 196 179 2 884 6742 216 19 12 chr17 39235880 39237517 -56035134 - Lx4A LINE L1 -9 7049 5395 2 884 494 31 0 15 chr17 39237518 39237583 -56035068 + (TTTTA)n Simple_repeat Simple_repeat 5 68 0 2 884 306 73 0 0 chr17 39237583 39237623 -56035028 + (TCTA)n Simple_repeat Simple_repeat 4 44 0 2 884 487 395 36 7 chr17 39237742 39238020 -56034631 - B4A SINE B4 -6 286 1 2 884 26 62 0 15 chr17 39238357 39238369 -56034282 + AT_rich Low_complexity Low_complexity 1 12 0 2 884 2440 197 8 15 chr17 39238369 39238848 -56033803 + Lx2B LINE L1 6519 6994 -6 2 884 26 62 0 15 chr17 39238848 39238900 -56033751 + AT_rich Low_complexity Low_complexity 1 52 0 2 884 336 48 0 0 chr17 39238965 39239007 -56033644 + (TTTC)n Simple_repeat Simple_repeat 2 43 0 2 884 508 333 31 49 chr17 39239007 39239283 -56033368 - MYSERV6-int LTR ERVK -4695 4264 3992 2 884 28 29 0 0 chr17 39239676 39239711 -56032940 + AT_rich Low_complexity Low_complexity 1 35 0 2 884 23 33 0 0 chr17 39239726 39239756 -56032895 + AT_rich Low_complexity Low_complexity 1 30 0 2 884 429 172 76 69 chr17 39239981 39240112 -56032539 + Lx LINE L1 6517 6648 -6 2 884 1254 287 20 65 chr17 39240132 39240401 -56032250 + Lx7 LINE L1 5351 5602 -278 2 884 1564 85 0 13 chr17 39240401 39240627 -56032024 - L1Md_F2 LINE L1 0 6582 6360 2 884 1546 296 30 46 chr17 39240627 39241417 -56031234 + Lx7 LINE L1 5603 6387 -1309 2 884 1100 250 90 68 chr17 39241419 39241831 -56030820 - RMER16 LTR ERVK 0 533 113 2 884 705 279 47 28 chr17 39241857 39242111 -56030540 + Lx7 LINE L1 6367 6625 -1071 2 884 1102 255 34 13 chr17 39242098 39242563 -56030088 + L1_Mur2 LINE L1 1584 2058 -3819 2 884 642 79 0 0 chr17 39242563 39242652 -56029999 + (GA)n Simple_repeat Simple_repeat 2 90 0 2 884 4599 197 5 17 chr17 39242694 39243692 -56028959 + L1_Mm LINE L1 4568 5553 -330 2 884 2453 68 3 33 chr17 39243692 39244028 -56028623 + IAPLTR3 LTR ERVK 1 326 0 2 884 45848 39 4 12 chr17 39244028 39249556 -56023095 + IAPLTR3-int LTR ERVK 1 5484 -1337 2 884 778 121 0 16 chr17 39249558 39249705 -56022946 + IAPLTR3-int LTR ERVK 5647 5746 -1075 2 884 5205 110 22 5 chr17 39250688 39251458 -56021193 + L1Md_F2 LINE L1 5797 6579 -3 2 884 558 0 0 0 chr17 39251461 39251523 -56021128 + (TA)n Simple_repeat Simple_repeat 1 62 0 2 884 852 327 29 44 chr17 39252479 39253110 -56019541 + RMER16-int LTR ERVK 4392 5012 -394 2 884 765 288 13 9 chr17 39254328 39254552 -56018099 + URR1A DNA MER1_type 2 226 0 2 884 2029 29 45 0 chr17 39255415 39255660 -56016991 + L1Md_F2 LINE L1 5331 5586 -297 2 884 7833 53 1 3 chr17 39255660 39256646 -56016005 + L1Md_F2 LINE L1 5587 6570 -12 2 884 520 354 132 34 chr17 39257899 39258279 -56014372 - MTC LTR MaLR -4 417 1 2 884 345 212 34 107 chr17 39258279 39258400 -56014251 - MTC-int LTR MaLR 0 1258 1171 2 884 2009 289 74 4 chr17 39258424 39259271 -56013380 + Lx5 LINE L1 5496 6404 -646 2 884 1692 254 26 15 chr17 39259276 39259736 -56012915 - MTC-int LTR MaLR -789 469 5 2 884 356 298 0 101 chr17 39259738 39259876 -56012775 - MTC LTR MaLR 0 421 298 2 884 383 266 108 25 chr17 39260394 39260410 -56012241 + CYRA11_Mm Unknown Y-chromosome 154 251 -366 2 884 664 240 41 0 chr17 39260410 39260581 -56012070 - URR1A DNA MER1_type -1 225 48 2 884 383 266 108 25 chr17 39260581 39260598 -56012053 + CYRA11_Mm Unknown Y-chromosome 252 374 -243 2 884 240 250 165 8 chr17 39260868 39260989 -56011662 + L1_Mur3 LINE L1 4038 4177 -1703 2 884 23 97 0 0 chr17 39261575 39261647 -56011004 + AT_rich Low_complexity Low_complexity 1 72 0 2 884 447 289 43 88 chr17 39262200 39262648 -56010003 - Lx7 LINE L1 -51 7645 7262 2 884 1358 202 44 3 chr17 39262652 39262950 -56009701 - Lx2 LINE L1 0 6997 6688 2 884 524 212 6 103 chr17 39262950 39263124 -56009527 + Lx2 LINE L1 6235 6391 -606 2 884 2865 15 0 0 chr17 39263223 39263549 -56009102 - IAPLTR3 LTR ERVK 0 326 1 2 884 12723 29 14 0 chr17 39263549 39265027 -56007624 - IAPLTR3-int LTR ERVK -20 6801 5304 2 884 11613 58 10 12 chr17 39265025 39266500 -56006151 - IAPLTR3-int LTR ERVK -5349 1472 1 2 884 2870 15 0 0 chr17 39266500 39266826 -56005825 - IAPLTR3 LTR ERVK 0 326 1 2 884 836 322 47 40 chr17 39266856 39267409 -56005242 - Lx7 LINE L1 -1265 6431 5875 2 884 5629 140 68 6 chr17 39267556 39269011 -56003640 + L1_Mus3 LINE L1 5093 6635 -3 2 884 423 206 0 0 chr17 39269032 39269124 -56003527 + L1_Mur3 LINE L1 4041 4132 -1748 2 884 523 158 22 22 chr17 39269095 39269233 -56003418 + Lx LINE L1 6317 6401 -253 2 884 5527 128 4 36 chr17 39269228 39270168 -56002483 + L1_Mus2 LINE L1 4646 5555 -328 2 884 233 50 0 0 chr17 39270171 39270211 -56002440 + L1_Mus2 LINE L1 6525 6564 -2 2 884 5003 125 21 9 chr17 39270236 39271052 -56001599 + L1_Mus2 LINE L1 5739 6564 -2 2 884 30171 88 5 16 chr17 39271341 39276597 -55996054 + L1Md_F2 LINE L1 387 5585 -298 2 884 7811 60 4 1 chr17 39276598 39277588 -55995063 + L1Md_F2 LINE L1 5587 6579 -3 2 884 249 333 28 0 chr17 39278691 39278832 -55993819 - Lx7 LINE L1 0 7696 7552 2 884 207 0 0 0 chr17 39278855 39278878 -55993773 + (T)n Simple_repeat Simple_repeat 1 23 0 2 884 31481 89 2 19 chr17 39278903 39284096 -55988555 + L1Md_F2 LINE L1 486 5586 -297 2 884 7591 66 3 3 chr17 39284096 39285080 -55987571 + L1Md_F2 LINE L1 5587 6570 -12 2 884 349 274 8 66 chr17 39285235 39285356 -55987295 + Tigger11a DNA MER2_type 595 708 -27 2 884 2964 65 10 0 chr17 39285842 39286226 -55986425 + RLTR10 LTR ERVK 1 388 -2 2 884 317 196 114 0 chr17 39286337 39286495 -55986156 + (ATATG)n Simple_repeat Simple_repeat 2 177 0 2 884 303 232 18 0 chr17 39286616 39286672 -55985979 + B3 SINE B2 1 57 -159 3 884 9306 65 2 1 chr17 39286693 39288138 -55984513 - L1Md_F2 LINE L1 -473 6109 4664 3 884 877 100 0 0 chr17 39288140 39288260 -55984391 - L1_Mm LINE L1 -841 5042 4923 3 884 370 246 27 68 chr17 39288268 39288416 -55984235 + B2_Mm2 SINE B2 54 195 0 3 884 442 236 94 58 chr17 39288473 39288702 -55983949 + L1M2 LINE L1 5243 5486 -805 3 884 885 312 35 10 chr17 39288740 39289054 -55983597 - Lx5 LINE L1 0 7050 6729 3 884 214 330 0 11 chr17 39289486 39289578 -55983073 + CT-rich Low_complexity Low_complexity 2 92 0 3 884 193 140 35 0 chr17 39290509 39290566 -55982085 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 884 684 71 0 0 chr17 39290573 39290672 -55981979 + (TCTA)n Simple_repeat Simple_repeat 4 102 0 3 884 1878 241 51 17 chr17 39290997 39291643 -55981008 + L1_Mur3 LINE L1 3971 4638 -1242 3 884 859 114 0 11 chr17 39292141 39292318 -55980333 + (TC)n Simple_repeat Simple_repeat 2 176 0 3 884 1037 116 0 0 chr17 39292318 39292464 -55980187 - B1_Mus1 SINE Alu -2 146 1 3 884 229 105 79 0 chr17 39292803 39292879 -55979772 + A-rich Low_complexity Low_complexity 3 84 0 3 884 272 314 29 29 chr17 39293221 39293326 -55979325 + RLTR20B1 LTR ERVK 184 288 -275 3 884 5115 117 61 2 chr17 39293341 39294145 -55978506 + L1_Mus4 LINE L1 5693 6543 -93 3 884 413 289 10 0 chr17 39294323 39294420 -55978231 + B1_Mur4 SINE Alu 52 149 -1 3 884 396 0 0 0 chr17 39294425 39294469 -55978182 + (CAA)n Simple_repeat Simple_repeat 2 45 0 3 884 203 133 0 0 chr17 39294469 39294499 -55978152 + (CAAG)n Simple_repeat Simple_repeat 2 31 0 3 884 581 234 90 45 chr17 39294500 39294840 -55977811 - MTC-int LTR MaLR -785 473 1 3 884 1141 303 40 48 chr17 39294841 39294857 -55977794 - MTC LTR MaLR -1 420 405 3 884 309 26 0 0 chr17 39294857 39294895 -55977756 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 3 884 1141 303 40 48 chr17 39294895 39295273 -55977378 - MTC LTR MaLR -17 404 29 3 884 564 224 26 39 chr17 39295800 39295953 -55976698 - URR1A DNA MER1_type -7 219 69 3 884 863 132 18 0 chr17 39296624 39296790 -55975861 - L1_Mus4 LINE L1 0 6636 6468 3 884 1726 85 4 0 chr17 39296791 39297027 -55975624 - LTRIS2 LTR ERV1 0 564 328 3 884 1314 163 0 69 chr17 39297028 39297258 -55975393 - L1_Mus4 LINE L1 -268 6368 6147 3 884 980 109 0 0 chr17 39297258 39297395 -55975256 + B1_Mus1 SINE Alu 1 137 -11 3 884 189 0 0 0 chr17 39297398 39297419 -55975232 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 3 884 1314 163 0 69 chr17 39297419 39297460 -55975191 - L1_Mus4 LINE L1 -490 6146 6112 3 884 549 113 9 54 chr17 39297480 39297592 -55975059 - ETnERV2-int LTR ERVK -2030 5214 5108 3 884 5965 140 23 4 chr17 39297611 39298522 -55974129 - ETnERV2-int LTR ERVK -2418 4988 4061 3 884 2986 53 22 10 chr17 39298523 39298925 -55973726 - L1Md_F3 LINE L1 0 6584 6178 3 884 4622 43 1 30 chr17 39298925 39299643 -55973008 + L1Md_F3 LINE L1 5465 6166 -418 3 884 3583 128 37 5 chr17 39299644 39300242 -55972409 - ETnERV2-int LTR ERVK -3332 4074 3458 3 884 7675 191 84 28 chr17 39300249 39302085 -55970566 + Lx4A LINE L1 3599 5575 -599 3 884 649 39 0 0 chr17 39302589 39302667 -55969984 + (CA)n Simple_repeat Simple_repeat 2 79 0 3 884 903 161 0 0 chr17 39302667 39302828 -55969823 + (TA)n Simple_repeat Simple_repeat 1 161 0 3 884 477 276 25 84 chr17 39302848 39303085 -55969566 - Lx7 LINE L1 -4 7692 7470 3 884 493 293 49 0 chr17 39303246 39303410 -55969241 - Lx7 LINE L1 -361 7335 7164 3 884 8447 191 78 122 chr17 39303421 39305566 -55967085 - L1_Mur1 LINE L1 -360 5526 3424 3 884 1686 162 0 0 chr17 39305566 39305850 -55966801 + L1_Mus4 LINE L1 6338 6621 -15 3 884 8447 191 78 122 chr17 39305850 39306913 -55965738 - L1_Mur1 LINE L1 -2463 3423 2459 3 884 707 179 24 41 chr17 39306910 39307079 -55965572 - L1_Mur1 LINE L1 -3606 2271 2106 3 884 5837 229 34 21 chr17 39307074 39308332 -55964319 + Lx4A LINE L1 5596 6883 -175 3 884 3914 246 28 7 chr17 39308332 39309220 -55963431 - RMER13B LTR ERVK 0 908 2 3 884 5837 229 34 21 chr17 39309220 39309403 -55963248 + Lx4A LINE L1 6884 7056 -2 3 884 661 275 29 15 chr17 39310134 39310618 -55962033 + Lx5 LINE L1 892 1447 -4430 3 884 5213 238 35 4 chr17 39310610 39312601 -55960050 + Lx5 LINE L1 4858 6920 -130 3 884 3245 82 0 7 chr17 39313849 39314277 -55958374 - L1Md_F2 LINE L1 -82 6500 6076 3 884 3346 70 2 7 chr17 39315469 39315914 -55956737 + L1Md_F2 LINE L1 6137 6579 -3 3 884 427 267 46 0 chr17 39317630 39317761 -55954890 - URR1B DNA MER1_type -1 224 88 3 884 283 322 141 5 chr17 39317761 39317810 -55954841 + CYRA11_Mm Unknown Y-chromosome 172 376 -241 3 884 468 0 0 0 chr17 39317836 39317888 -55954763 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 884 513 0 0 0 chr17 39319101 39319158 -55953493 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 884 340 259 74 0 chr17 39319159 39319267 -55953384 + URR1B DNA MER1_type 108 223 -2 3 884 531 276 69 11 chr17 39319819 39319993 -55952658 + MTC LTR MaLR 1 180 -241 3 884 8636 135 15 5 chr17 39319994 39321586 -55951065 + Lx3_Mus LINE L1 5397 7001 -8 3 885 542 315 21 112 chr17 39321615 39321855 -55950796 + MTC LTR MaLR 204 421 0 3 885 851 280 38 60 chr17 39321854 39322223 -55950428 + MTC-int LTR MaLR 2 362 -896 3 885 2156 104 63 0 chr17 39322227 39322545 -55950106 + L1_Mus2 LINE L1 6007 6344 -222 3 885 4211 166 8 28 chr17 39322540 39322716 -55949935 + L1_Mus2 LINE L1 5115 5287 -596 3 885 1102 82 0 0 chr17 39322716 39322862 -55949789 - B1_Mm SINE Alu 0 147 2 3 885 6551 130 11 7 chr17 39322862 39324142 -55948509 + L1_Mus2 LINE L1 5288 6565 -1 3 885 468 77 0 0 chr17 39324149 39324214 -55948437 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 885 717 312 9 38 chr17 39324248 39324588 -55948063 + Lx7 LINE L1 5975 6304 -1392 3 885 3829 143 16 109 chr17 39324814 39325183 -55947468 + RMER17D2 LTR ERVK 1 328 -481 3 885 1032 119 11 6 chr17 39325183 39325361 -55947290 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 3 885 3829 143 16 109 chr17 39325361 39325883 -55946768 + RMER17D2 LTR ERVK 329 809 0 3 885 3324 175 50 31 chr17 39327629 39328373 -55944278 + RLTR13A LTR ERVK 1 758 -97 3 885 414 124 45 0 chr17 39328383 39328472 -55944179 - L1Md_F3 LINE L1 -2 6582 6490 3 885 371 274 28 9 chr17 39329076 39329183 -55943468 + Lx7 LINE L1 6356 6464 -1232 3 885 1472 286 50 28 chr17 39329219 39329819 -55942832 + Lx7 LINE L1 6795 7407 -289 3 885 381 182 0 33 chr17 39329845 39329936 -55942715 - L1_Mur2 LINE L1 -4463 1414 1327 3 885 3450 140 16 18 chr17 39329944 39330512 -55942139 + RLTR1D LTR ERV1 37 603 -2 3 885 282 236 62 66 chr17 39330514 39330641 -55942010 - L1_Mur2 LINE L1 -5755 1331 1203 3 885 1103 75 7 0 chr17 39330641 39330787 -55941864 - B1_Mm SINE Alu 0 147 1 3 885 1756 191 8 8 chr17 39330787 39331166 -55941485 - L1_Mur2 LINE L1 -5818 1268 890 3 885 901 295 38 6 chr17 39331182 39331542 -55941109 - L1_Mur2 LINE L1 -6292 794 375 3 885 337 279 106 30 chr17 39331756 39331992 -55940659 - Lx8 LINE L1 -1629 5844 5591 3 885 1835 192 16 23 chr17 39332125 39332509 -55940142 + Lx3B LINE L1 6592 6972 -1 3 885 566 244 161 0 chr17 39333276 39333469 -55939182 + URR1A DNA MER1_type 1 224 -2 3 885 344 244 31 44 chr17 39334018 39334141 -55938510 + MTB_Mm LTR MaLR 274 418 -3 3 885 382 360 37 33 chr17 39334150 39334391 -55938260 - Lx5 LINE L1 -209 6841 6600 3 885 642 26 0 0 chr17 39334536 39334612 -55938039 + (TC)n Simple_repeat Simple_repeat 1 76 0 3 885 4275 192 23 51 chr17 39334674 39335736 -55936915 + MusHAL1 LINE L1 873 1904 -808 3 885 257 246 15 0 chr17 39336617 39336682 -55935969 + (TATATG)n Simple_repeat Simple_repeat 2 67 0 3 885 22 0 0 0 chr17 39337388 39337410 -55935241 + AT_rich Low_complexity Low_complexity 1 22 0 3 885 33 43 0 0 chr17 39337618 39337665 -55934986 + AT_rich Low_complexity Low_complexity 1 47 0 3 885 568 48 0 35 chr17 39337830 39337916 -55934735 + (TTCC)n Simple_repeat Simple_repeat 2 84 0 3 885 325 370 59 0 chr17 39337980 39338115 -55934536 - B1_Mur4 SINE Alu -7 143 1 3 885 2835 210 13 15 chr17 39338401 39339019 -55933632 + Lx3A LINE L1 6357 6973 -8 3 885 242 29 0 28 chr17 39339023 39339059 -55933592 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 3 885 4321 156 22 46 chr17 39339158 39340787 -55931864 + L1VL2 LINE L1 94 1670 -1945 3 885 478 332 28 14 chr17 39340791 39341139 -55931512 + Lx7 LINE L1 5522 5853 -447 3 885 875 201 281 38 chr17 39341417 39341866 -55930785 + Lx3C LINE L1 1534 2091 -3795 3 885 5188 124 22 59 chr17 39341866 39342802 -55929849 + RLTR13D6 LTR ERVK 1 902 0 3 885 3198 159 25 14 chr17 39342804 39343455 -55929196 + Lx3C LINE L1 2088 2745 -3141 3 885 377 0 0 0 chr17 39343495 39343538 -55929113 + MusHAL1 LINE L1 1523 1565 -1147 3 885 2540 56 0 0 chr17 39343547 39343869 -55928782 - IAPEY2_LTR LTR ERVK -3 354 33 3 885 3219 126 17 31 chr17 39343880 39344613 -55928038 - IAPEY3-int LTR ERVK 0 7581 6907 3 885 480 51 0 0 chr17 39344613 39344672 -55927979 - IAPEY3-int LTR ERVK -2770 4910 4852 3 885 3413 76 11 0 chr17 39344665 39345112 -55927539 - IAPEY3-int LTR ERVK -4991 2689 2238 3 885 8813 138 13 39 chr17 39345089 39346587 -55926064 - IAPEY3-int LTR ERVK -5698 1982 524 3 885 745 174 56 43 chr17 39346586 39346748 -55925903 - IAPEY3-int LTR ERVK -1290 180 1 3 885 2904 65 0 0 chr17 39346748 39347102 -55925549 - IAPEY2_LTR LTR ERVK -3 354 1 3 885 10991 218 22 57 chr17 39347104 39347804 -55924847 + Lx3C LINE L1 2781 3480 -2406 3 885 846 139 12 19 chr17 39347804 39347965 -55924686 + L1_Mus3 LINE L1 6472 6631 -7 3 885 10991 218 22 57 chr17 39347965 39348877 -55923774 + Lx3C LINE L1 3481 4246 -1640 3 885 201 39 0 0 chr17 39348877 39348903 -55923748 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 885 10991 220 25 45 chr17 39348903 39351224 -55921427 + Lx3C LINE L1 4247 6612 -364 3 885 21585 183 30 44 chr17 39351267 39354056 -55918595 + L1_Mus3 LINE L1 747 3490 -2393 3 885 345 24 0 0 chr17 39354056 39354098 -55918553 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 3 885 189 0 0 0 chr17 39354099 39354120 -55918531 + (CAAG)n Simple_repeat Simple_repeat 1 21 0 3 885 21585 166 45 26 chr17 39354120 39357258 -55915393 + L1_Mus3 LINE L1 3491 6633 -5 3 885 226 259 64 9 chr17 39357553 39357662 -55914989 - L1_Mur2 LINE L1 -1633 4244 4130 3 885 5784 87 15 8 chr17 39358053 39358855 -55913796 + RLTR13C2 LTR ERVK 1 808 0 3 885 2948 238 48 39 chr17 39359500 39359722 -55912929 - L1_Mur2 LINE L1 -2897 2980 2741 3 885 288 0 0 0 chr17 39359722 39359754 -55912897 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 3 885 2948 238 48 39 chr17 39359754 39360283 -55912368 - L1_Mur2 LINE L1 -3137 2740 2207 3 885 389 78 47 0 chr17 39360283 39360347 -55912304 + (CTTTG)n Simple_repeat Simple_repeat 3 69 0 3 885 2948 238 48 39 chr17 39360347 39360510 -55912141 - L1_Mur2 LINE L1 -3671 2206 2053 3 885 330 67 0 0 chr17 39360510 39360555 -55912096 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 885 2948 238 48 39 chr17 39360555 39360672 -55911979 - L1_Mur2 LINE L1 -3825 2052 1937 3 885 815 341 44 27 chr17 39361601 39361786 -55910865 - MTC LTR MaLR -3 418 237 3 885 504 48 0 0 chr17 39361786 39361849 -55910802 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 3 885 815 341 44 27 chr17 39361849 39362070 -55910581 - MTC LTR MaLR -185 236 5 3 885 35123 78 1 15 chr17 39362163 39368351 -55904300 - L1Md_F2 LINE L1 -3 6579 483 3 885 2932 208 62 33 chr17 39368374 39369131 -55903520 + RLTR22_Mur LTR ERVK 20 798 -1050 3 885 933 225 78 29 chr17 39369431 39369674 -55902977 + RLTR22_Mur LTR ERVK 1590 1844 -4 3 885 369 0 0 0 chr17 39369766 39369807 -55902844 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 885 378 0 0 0 chr17 39369807 39369848 -55902803 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 885 602 266 26 0 chr17 39369849 39370003 -55902648 + Lx4B LINE L1 6423 6580 -478 3 885 1134 233 88 36 chr17 39369998 39370327 -55902324 + Lx4B LINE L1 6712 7057 -1 3 885 2344 274 35 12 chr17 39370351 39370996 -55901655 + Lx5 LINE L1 5500 6172 -878 3 885 276 53 0 0 chr17 39370996 39371034 -55901617 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 3 885 2344 331 59 40 chr17 39371034 39371997 -55900654 + Lx5 LINE L1 6173 7050 0 3 885 207 0 0 0 chr17 39372051 39372074 -55900577 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 3 885 995 83 0 0 chr17 39372074 39372206 -55900445 - B1_Mus2 SINE Alu -11 136 5 3 885 3173 296 16 11 chr17 39372244 39373213 -55899438 - MTB_Mm-int LTR MaLR -284 974 2 3 885 598 300 105 28 chr17 39373212 39373496 -55899155 - MTB_Mm LTR MaLR 0 421 121 3 885 979 260 98 23 chr17 39374033 39374419 -55898232 - MTC LTR MaLR -2 419 5 3 885 968 299 42 22 chr17 39374441 39374844 -55897807 + Lx7 LINE L1 6936 7346 -350 3 885 384 82 0 0 chr17 39375146 39375207 -55897444 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 885 690 75 0 0 chr17 39375207 39375312 -55897339 + (GA)n Simple_repeat Simple_repeat 2 107 0 4 885 299 257 0 0 chr17 39375324 39375425 -55897226 - L1_Mur1 LINE L1 -3846 2040 1940 4 885 535 335 64 11 chr17 39375444 39375710 -55896941 + Lx6 LINE L1 6961 7240 -220 4 885 295 258 0 0 chr17 39375767 39375829 -55896822 - MTB_Mm LTR MaLR -73 334 273 4 885 659 236 50 0 chr17 39376408 39376569 -55896082 - URR1A DNA MER1_type -2 224 56 4 885 1448 239 16 41 chr17 39377371 39377759 -55894892 - Lx3B LINE L1 -4 6969 6592 4 885 577 304 32 26 chr17 39377808 39378144 -55894507 + Lx7 LINE L1 5504 5845 -1851 4 885 580 280 28 14 chr17 39378191 39378221 -55894430 - Lx5 LINE L1 -1247 5803 5771 4 885 890 193 5 20 chr17 39378221 39378417 -55894234 + Lx2 LINE L1 6791 6983 -14 4 885 580 280 28 14 chr17 39378417 39378600 -55894051 - Lx5 LINE L1 -1280 5770 5587 4 885 1616 282 27 77 chr17 39378624 39379173 -55893478 - RLTR20B3 LTR ERVK -51 526 5 4 885 302 262 18 80 chr17 39379173 39379262 -55893389 - Lx5 LINE L1 -281 5596 5514 4 885 1513 105 0 0 chr17 39379262 39379481 -55893170 - L1_Mus2 LINE L1 0 6566 6348 4 885 302 262 18 80 chr17 39379481 39379503 -55893148 - Lx5 LINE L1 -364 5513 5492 4 885 799 160 39 0 chr17 39379584 39379740 -55892911 - Lx LINE L1 -23 6631 6470 4 885 226 257 71 0 chr17 39379745 39379815 -55892836 + MTB_Mm-int LTR MaLR 1180 1254 -4 4 885 816 283 92 20 chr17 39379819 39380161 -55892490 + MTB_Mm LTR MaLR 1 371 -36 4 885 1316 265 74 32 chr17 39381226 39381659 -55890992 - Lx3C LINE L1 -40 6936 6486 4 885 561 105 0 0 chr17 39382074 39382169 -55890482 + (CA)n Simple_repeat Simple_repeat 2 96 0 4 885 440 282 17 17 chr17 39382769 39382888 -55889763 - B1_Mur4 SINE Alu -7 143 25 4 885 9608 242 30 31 chr17 39383412 39387062 -55885589 + Lx5 LINE L1 3393 7046 -4 4 885 681 82 0 0 chr17 39387155 39387252 -55885399 + (CA)n Simple_repeat Simple_repeat 1 97 0 4 885 2517 45 0 0 chr17 39388270 39388579 -55884072 + L1Md_F2 LINE L1 6274 6582 0 4 885 180 149 12 86 chr17 39388608 39388689 -55883962 + A-rich Low_complexity Low_complexity 4 78 0 4 885 504 241 0 0 chr17 39388797 39388934 -55883717 + (TA)n Simple_repeat Simple_repeat 2 138 0 4 885 1550 131 0 0 chr17 39390169 39390398 -55882253 - RLTR27 LTR ERVK -80 229 1 4 885 1239 269 53 35 chr17 39390398 39391343 -55881308 - MMERVK10C-int LTR ERVK 0 7581 6512 4 885 870 262 61 55 chr17 39391456 39391654 -55880997 - MMERVK10C-int LTR ERVK -2103 5478 5273 4 885 1526 71 0 19 chr17 39391654 39391870 -55880781 + L1Md_F3 LINE L1 6373 6584 0 4 885 870 262 61 55 chr17 39391870 39392111 -55880540 - MMERVK10C-int LTR ERVK -2309 5272 5036 4 885 2247 310 25 51 chr17 39392128 39393492 -55879159 - MMERVK10C-int LTR ERVK -5124 2457 1129 4 885 212 289 20 20 chr17 39393764 39393863 -55878788 + T-rich Low_complexity Low_complexity 1 99 0 4 885 344 226 0 50 chr17 39393863 39393984 -55878667 - MMERVK10C-int LTR ERVK -1130 857 743 4 885 376 68 85 0 chr17 39394130 39394189 -55878462 - MMERVK10C-int LTR ERVK -7314 267 204 4 885 2129 136 0 0 chr17 39394211 39394520 -55878131 - RLTR27 LTR ERVK 0 309 1 4 885 255 31 0 0 chr17 39394583 39394615 -55878036 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 885 367 275 138 15 chr17 39395610 39395806 -55876845 - URR1B DNA MER1_type -1 224 5 4 885 399 257 26 29 chr17 39396228 39396341 -55876310 + Lx5 LINE L1 6136 6280 -770 4 885 1592 311 32 20 chr17 39396354 39396890 -55875761 + Lx5 LINE L1 6507 7048 -2 4 885 22 56 0 0 chr17 39396894 39396930 -55875721 + AT_rich Low_complexity Low_complexity 1 36 0 4 885 291 343 131 45 chr17 39396967 39397281 -55875370 + Lx5 LINE L1 6668 7008 -42 4 885 480 77 0 0 chr17 39397319 39397384 -55875267 + (CATA)n Simple_repeat Simple_repeat 2 66 0 4 885 1240 240 36 13 chr17 39397387 39397691 -55874960 - MTC-int LTR MaLR -186 1072 762 4 885 579 258 24 24 chr17 39397661 39397828 -55874823 - MTC-int LTR MaLR -1090 168 2 4 885 1060 299 39 71 chr17 39397827 39398234 -55874417 - MTC LTR MaLR 0 421 28 4 885 634 284 47 68 chr17 39399352 39399791 -55872860 + Lx7 LINE L1 5470 5907 -384 4 885 289 277 8 142 chr17 39399837 39400015 -55872636 - RMER17B LTR ERVK -519 439 288 4 885 180 0 0 0 chr17 39400015 39400035 -55872616 + (TTA)n Simple_repeat Simple_repeat 2 21 0 4 885 289 277 8 142 chr17 39400035 39400096 -55872555 - RMER17B LTR ERVK -671 287 232 4 885 466 260 101 25 chr17 39400123 39400281 -55872370 - ORR1B2 LTR MaLR -80 287 118 4 885 4568 192 18 0 chr17 39400977 39401956 -55870695 - L1_Mur2 LINE L1 -2567 3310 2314 4 885 3305 248 40 8 chr17 39401954 39402897 -55869754 + Lx4A LINE L1 5710 6682 -376 4 885 1947 116 0 0 chr17 39402894 39403178 -55869473 - L1_Mus3 LINE L1 -604 6034 5751 4 885 1478 43 5 0 chr17 39403203 39403388 -55869263 - MTA_Mm LTR MaLR 0 396 211 4 885 2663 58 0 0 chr17 39403384 39403726 -55868925 + IAPEY2_LTR LTR ERVK 13 354 -3 4 885 18284 173 9 37 chr17 39403729 39404639 -55868012 - L1_Mus3 LINE L1 -124 5759 4935 4 885 1999 119 0 3 chr17 39404639 39404942 -55867709 + L1_Mus2 LINE L1 6265 6566 0 4 885 18284 173 9 37 chr17 39404942 39407724 -55864927 - L1_Mus3 LINE L1 -949 4934 2169 4 885 1730 160 14 10 chr17 39407718 39408009 -55864642 + L1_Mus4 LINE L1 5849 6140 -496 4 885 3079 8 43 0 chr17 39408009 39408361 -55864290 - IAPLTR1_Mm LTR ERVK 0 367 1 4 885 16440 21 2 0 chr17 39408361 39410226 -55862425 - IAPEz-int LTR ERVK 0 6481 4613 4 885 5376 13 0 3 chr17 39410218 39410824 -55861827 - IAPEz-int LTR ERVK -2353 4128 3525 4 885 914 81 24 0 chr17 39410824 39410947 -55861704 - IAPEz-int LTR ERVK -2770 4910 4785 4 885 1763 123 4 15 chr17 39410944 39411209 -55861442 - IAPEz-int LTR ERVK -5183 2497 2236 4 885 442 66 0 32 chr17 39411198 39411261 -55861390 - IAPEz-int LTR ERVK -5062 1419 1359 4 885 3416 79 13 14 chr17 39411261 39411990 -55860661 - IAPEz-int LTR ERVK -5819 662 8 4 885 3079 8 43 0 chr17 39411990 39412342 -55860309 - IAPLTR1_Mm LTR ERVK 0 367 1 4 885 2370 142 0 0 chr17 39412342 39412695 -55859956 + L1_Mus4 LINE L1 6135 6487 -149 4 885 808 312 18 72 chr17 39412978 39413249 -55859402 + MTB_Mm LTR MaLR 30 286 -121 4 885 423 0 0 0 chr17 39413249 39413296 -55859355 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 4 885 808 312 18 72 chr17 39413296 39413359 -55859292 + MTB_Mm LTR MaLR 287 346 -61 4 885 2981 267 102 18 chr17 39413444 39414452 -55858199 + MTC-int LTR MaLR 1 1093 -165 4 885 7348 222 48 20 chr17 39414627 39414891 -55857760 - L1_Mur2 LINE L1 -1539 4338 4071 4 885 1171 99 8 17 chr17 39414891 39415255 -55857396 + (GAAA)n Simple_repeat Simple_repeat 1 360 0 4 885 7348 222 48 20 chr17 39415255 39416165 -55856486 - L1_Mur2 LINE L1 -1807 4070 3140 4 885 698 62 0 10 chr17 39416165 39416262 -55856389 + (TTCC)n Simple_repeat Simple_repeat 1 96 0 4 885 7348 222 48 20 chr17 39416262 39417164 -55855487 - L1_Mur2 LINE L1 -2738 3139 2202 4 885 274 206 0 0 chr17 39417163 39417231 -55855420 - Lx2 LINE L1 0 6997 6930 4 885 9314 43 0 0 chr17 39417250 39418418 -55854233 - L1_Mm LINE L1 -2996 2887 1720 4 885 1391 213 24 83 chr17 39418417 39418549 -55854102 - L1_Mur2 LINE L1 -3695 2182 2058 4 885 450 65 0 0 chr17 39418549 39418611 -55854040 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 885 1391 213 24 83 chr17 39418611 39418934 -55853717 - L1_Mur2 LINE L1 -3820 2057 1754 4 885 4386 130 62 9 chr17 39418936 39419672 -55852979 - Lx3_Mus LINE L1 -5 7004 6230 4 885 1183 202 10 90 chr17 39419673 39420060 -55852591 + L1_Mur2 LINE L1 1835 2190 -3687 4 885 3463 196 18 25 chr17 39420097 39420870 -55851781 + L1_Mur2 LINE L1 3935 4702 -1175 4 885 798 300 5 0 chr17 39421522 39421742 -55850909 + URR1A DNA MER1_type 5 225 -1 4 885 1935 134 64 0 chr17 39422194 39422508 -55850143 + L1_Mus3 LINE L1 6300 6633 -5 4 885 391 240 107 0 chr17 39422796 39422946 -55849705 - L1_Mur2 LINE L1 -2321 3556 3391 4 885 207 0 0 0 chr17 39423353 39423376 -55849275 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 885 249 223 239 55 chr17 39423457 39423566 -55849085 + B1_Mus1 SINE Alu 19 147 -1 4 885 3007 76 2 8 chr17 39423917 39424315 -55848336 - MTA_Mm LTR MaLR 0 396 1 4 885 6480 104 39 79 chr17 39424317 39425458 -55847193 - MTA_Mm-int LTR MaLR -2 1096 1 4 885 600 149 9 47 chr17 39425458 39425614 -55847037 - MTA_Mm LTR MaLR 0 407 194 4 885 5083 103 13 8 chr17 39425614 39426444 -55846207 + MERVL-int LTR ERVL 4651 5629 -132 4 885 301 155 27 53 chr17 39426444 39426519 -55846132 + ORR1A3-int LTR MaLR 567 639 -1324 4 885 277 79 0 0 chr17 39426520 39426558 -55846093 + MERVL-int LTR ERVL 5448 5485 0 4 885 3421 95 2 6 chr17 39426558 39427035 -55845616 + MT2C_Mm LTR ERVL 1 475 0 4 885 378 0 0 0 chr17 39427304 39427346 -55845305 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 885 3487 23 0 0 chr17 39427369 39427765 -55844886 + MTA_Mm LTR MaLR 1 396 0 4 885 2406 287 119 17 chr17 39428003 39428027 -55844624 + MTA_Mm-int LTR MaLR 2 33 -1225 4 885 261 0 0 0 chr17 39428027 39428056 -55844595 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 4 885 2406 287 119 17 chr17 39428056 39428910 -55843741 + MTA_Mm-int LTR MaLR 34 970 -288 4 885 2473 296 35 28 chr17 39428964 39430610 -55842041 - Lx5 LINE L1 -2 7048 5499 4 885 1249 232 103 22 chr17 39430636 39430957 -55841694 - Lx4A LINE L1 0 7058 6712 4 885 696 197 171 0 chr17 39430952 39431104 -55841547 - Lx4A LINE L1 -478 6580 6403 4 885 981 201 88 18 chr17 39431190 39431418 -55841233 - RLTR22_Mur LTR ERVK -12 1836 1593 4 885 401 19 38 0 chr17 39432034 39432087 -55840564 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 4 885 1051 82 0 14 chr17 39432090 39432238 -55840413 - B1_Mm SINE Alu 0 147 2 4 885 286 200 78 26 chr17 39432578 39432655 -55839996 + RLTR25B LTR ERVK 430 510 -518 4 885 781 85 0 0 chr17 39432591 39432697 -55839954 + B1_Mus2 SINE Alu 42 147 0 4 885 186 82 0 75 chr17 39432702 39432755 -55839896 + A-rich Low_complexity Low_complexity 4 52 0 4 885 1439 266 84 19 chr17 39433743 39434207 -55838444 - Lx2B LINE L1 -62 6938 6445 4 885 2243 241 95 1 chr17 39434207 39434871 -55837780 - Lx2B LINE L1 -722 6278 5583 4 885 470 94 0 0 chr17 39434873 39434937 -55837714 - L1_Mur1 LINE L1 -883 5003 4940 4 885 2149 258 24 29 chr17 39434953 39435504 -55837147 - RLTR20B1 LTR ERVK -15 548 1 4 885 2037 208 50 0 chr17 39435506 39435982 -55836669 - MYSERV16_I-int LTR ERVK -2 2324 1825 4 885 1616 121 0 0 chr17 39435982 39436214 -55836437 - L1_Mur1 LINE L1 -63 5823 5592 4 885 1191 107 0 0 chr17 39437014 39437192 -55835459 + (TCTCC)n Simple_repeat Simple_repeat 1 178 0 4 885 537 16 0 0 chr17 39437192 39437254 -55835397 + (TCCCC)n Simple_repeat Simple_repeat 4 65 0 4 885 208 96 58 0 chr17 39437465 39437517 -55835134 + A-rich Low_complexity Low_complexity 4 58 0 4 885 377 300 161 6 chr17 39437621 39437782 -55834869 - RLTR26 LTR ERVK 0 642 457 4 885 8367 56 3 1 chr17 39437787 39439518 -55833133 - L1Md_F2 LINE L1 -12 6570 4836 4 885 8982 60 6 11 chr17 39439514 39440730 -55831921 + L1_Mm LINE L1 3309 4517 -1366 4 885 1237 228 60 4 chr17 39440731 39441000 -55831651 - RLTR26 LTR ERVK -358 284 1 4 885 462 295 43 0 chr17 39441000 39441139 -55831512 - ORR1D-int LTR MaLR -1180 190 46 4 885 360 272 8 59 chr17 39441141 39441274 -55831377 + MTC LTR MaLR 282 396 -25 4 885 28 0 0 0 chr17 39441308 39441336 -55831315 + AT_rich Low_complexity Low_complexity 1 28 0 4 885 963 339 37 27 chr17 39441344 39441936 -55830715 + Lx7 LINE L1 5881 6478 -1218 4 885 1854 286 62 42 chr17 39441938 39442827 -55829824 + Lx7 LINE L1 6790 7696 0 4 885 22 56 0 0 chr17 39442830 39442866 -55829785 + AT_rich Low_complexity Low_complexity 1 36 0 4 885 585 331 28 54 chr17 39443301 39443691 -55828960 - L1_Rod LINE L1 -11 5836 5457 4 885 322 312 87 6 chr17 39443975 39444136 -55828515 - L1MD LINE L1 -1900 4246 4073 4 885 502 276 43 0 chr17 39444431 39444594 -55828057 + URR1A DNA MER1_type 56 225 -1 4 885 245 139 24 37 chr17 39445296 39445378 -55827273 + (TAA)n Simple_repeat Simple_repeat 1 81 0 4 885 23 33 0 0 chr17 39445926 39445956 -55826695 + AT_rich Low_complexity Low_complexity 1 30 0 4 885 354 369 42 45 chr17 39446206 39446470 -55826181 + L1MCa LINE L1 326 588 -5920 4 885 379 228 65 113 chr17 39446945 39447113 -55825538 + URR1A DNA MER1_type 66 225 -1 4 885 3790 228 89 11 chr17 39447659 39449402 -55823249 - L1_Mur1 LINE L1 -3304 2582 702 4 885 247 238 0 81 chr17 39449599 39449686 -55822965 - L1_Mur1 LINE L1 -6231 753 674 4 885 367 212 0 0 chr17 39449828 39449913 -55822738 - L1_Mur1 LINE L1 -6228 756 690 4 885 498 329 29 14 chr17 39450198 39450571 -55822080 - Lx7 LINE L1 -1855 5841 5489 4 885 477 207 0 0 chr17 39450564 39450651 -55822000 - L1VL2 LINE L1 -5937 398 312 5 885 22 35 0 0 chr17 39450652 39450681 -55821970 + AT_rich Low_complexity Low_complexity 1 29 0 5 885 213 65 0 0 chr17 39450737 39450768 -55821883 + (TATG)n Simple_repeat Simple_repeat 2 32 0 5 885 2979 203 11 11 chr17 39450784 39451401 -55821250 - Lx3A LINE L1 -8 6973 6357 5 885 233 0 62 0 chr17 39451407 39451439 -55821212 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 5 885 252 340 87 10 chr17 39451803 39451907 -55820744 + B1_Mur4 SINE Alu 33 144 -6 5 885 612 62 0 0 chr17 39451967 39452048 -55820603 + (GA)n Simple_repeat Simple_repeat 2 82 0 5 885 510 17 0 0 chr17 39452049 39452108 -55820543 + (GGAA)n Simple_repeat Simple_repeat 2 60 0 5 885 906 288 36 1 chr17 39452176 39452498 -55820153 - L1_Mur1 LINE L1 -5993 989 578 5 110 271 240 43 14 chr17 39452668 39452768 -55819883 - L1_Mur1 LINE L1 -6168 814 642 5 886 345 275 53 34 chr17 39453232 39453439 -55819212 - Lx7 LINE L1 -1827 5869 5659 5 886 4217 148 65 33 chr17 39453572 39455098 -55817553 - L1VL2 LINE L1 -1933 1682 125 5 886 36 23 0 0 chr17 39455199 39455242 -55817409 + AT_rich Low_complexity Low_complexity 1 43 0 5 886 3244 176 14 3 chr17 39455243 39455837 -55816814 - Lx3A LINE L1 -8 6973 6374 5 886 22 35 0 0 chr17 39455866 39455895 -55816756 + AT_rich Low_complexity Low_complexity 1 29 0 5 886 401 358 29 0 chr17 39456074 39456211 -55816440 + B1_Mur4 SINE Alu 2 142 -8 5 886 474 18 0 0 chr17 39456248 39456296 -55816355 + (GA)n Simple_repeat Simple_repeat 2 49 0 5 886 678 25 0 0 chr17 39456296 39456376 -55816275 + (GGAA)n Simple_repeat Simple_repeat 4 83 0 5 886 474 18 0 0 chr17 39456376 39456384 -55816267 + (GA)n Simple_repeat Simple_repeat 2 9 0 5 886 198 118 0 0 chr17 39456577 39456611 -55816040 + (TAA)n Simple_repeat Simple_repeat 1 34 0 5 886 22 70 0 0 chr17 39456789 39456832 -55815819 + AT_rich Low_complexity Low_complexity 1 43 0 5 886 654 353 68 37 chr17 39457627 39458115 -55814536 + Lx9 LINE L1 6359 6861 -783 5 886 2963 248 67 27 chr17 39458229 39459000 -55813651 - RMER13B LTR ERVK -42 866 65 5 886 4024 64 0 26 chr17 39459005 39459538 -55813113 + MURVY-LTR LTR ERV1 1 519 0 5 886 274 231 0 108 chr17 39459538 39459640 -55813011 + MMERGLN-int LTR ERV1 3 93 -4970 5 886 308 258 55 101 chr17 39459652 39459889 -55812762 + MMERGLN-int LTR ERV1 43 268 -7510 5 886 3133 318 59 57 chr17 39460064 39460435 -55812216 + MMERGLN-int LTR ERV1 425 784 -6668 5 886 369 43 0 0 chr17 39460435 39460482 -55812169 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 5 886 4804 304 46 36 chr17 39460482 39462666 -55809985 + MMERGLN-int LTR ERV1 785 3111 -4445 5 886 7044 285 26 17 chr17 39462664 39464717 -55807934 + MuRRS4-int LTR ERV1 2069 4140 -923 5 886 288 111 0 0 chr17 39464717 39464771 -55807880 + (CAAAAA)n Simple_repeat Simple_repeat 6 59 0 5 886 421 277 9 2 chr17 39464771 39464906 -55807745 + MuRRS4-int LTR ERV1 5373 5490 -2066 5 886 264 77 0 0 chr17 39465135 39465174 -55807477 + RLTR6-int LTR ERV1 7740 7778 0 5 886 4030 64 0 30 chr17 39465174 39465709 -55806942 + MURVY-LTR LTR ERV1 1 519 0 5 886 320 175 0 31 chr17 39465718 39465783 -55806868 - RMER17B LTR ERVK -895 63 1 5 886 3391 201 98 45 chr17 39466013 39467018 -55805633 - L1_Mur1 LINE L1 -2770 3116 2059 5 886 321 198 0 0 chr17 39467065 39467156 -55805495 + GA-rich Low_complexity Low_complexity 2 92 0 5 886 587 323 46 46 chr17 39467268 39467528 -55805123 + Lx5 LINE L1 6609 6868 -182 5 886 275 194 0 61 chr17 39467552 39467618 -55805033 - MTB_Mm LTR MaLR -66 341 280 5 886 1749 138 10 36 chr17 39467762 39468071 -55804580 + L1_Mus4 LINE L1 6330 6630 -6 5 886 541 234 54 14 chr17 39468497 39468644 -55804007 - URR1A DNA MER1_type -2 224 72 5 886 5593 88 14 0 chr17 39468682 39469448 -55803203 + L1_Mus1 LINE L1 5787 6563 -4 5 886 1721 206 3 9 chr17 39469464 39469797 -55802854 + Lx3B LINE L1 6247 6577 -396 5 886 22 35 0 0 chr17 39470151 39470180 -55802471 + AT_rich Low_complexity Low_complexity 1 29 0 5 886 4103 192 16 12 chr17 39470182 39471067 -55801584 - L1_Mur2 LINE L1 -840 5037 4150 5 886 2450 145 16 24 chr17 39471065 39471561 -55801090 + MusHAL1 LINE L1 773 1264 -1448 5 886 6924 166 34 11 chr17 39471620 39473563 -55799088 + L1_Mus2 LINE L1 510 2430 -3453 5 886 6699 114 6 8 chr17 39473567 39474765 -55797886 + L1_Mus2 LINE L1 5370 6564 -2 5 886 11912 199 37 11 chr17 39474773 39477460 -55795191 + L1_Mur1 LINE L1 2458 5214 -672 5 886 3689 145 21 2 chr17 39477462 39478084 -55794567 + Lx LINE L1 6021 6654 0 5 886 1263 70 6 6 chr17 39478383 39478555 -55794096 - MTA_Mm LTR MaLR 0 396 225 5 886 412 335 37 34 chr17 39478699 39478996 -55793655 - Lx8 LINE L1 -1584 5889 5592 5 886 9571 19 12 1 chr17 39479100 39480218 -55792433 - L1Md_T LINE L1 -18 5865 4735 5 886 5761 44 1 0 chr17 39480218 39480922 -55791729 + L1Md_T LINE L1 5878 6582 0 5 886 740 209 181 0 chr17 39481692 39481874 -55790777 + URR1A DNA MER1_type 10 224 -2 5 886 251 284 40 40 chr17 39482425 39482524 -55790127 + MTA_Mm LTR MaLR 262 360 -36 5 886 550 360 24 28 chr17 39482525 39482779 -55789872 - Lx5 LINE L1 -184 6866 6614 5 886 493 329 49 20 chr17 39482796 39483041 -55789610 - Lx6 LINE L1 -652 6808 6557 5 886 1097 278 26 23 chr17 39483054 39483363 -55789288 + MTC LTR MaLR 105 414 -7 5 886 412 18 35 0 chr17 39484009 39484066 -55788585 + (TA)n Simple_repeat Simple_repeat 1 59 0 5 886 202 206 0 0 chr17 39485283 39485317 -55787334 + polypyrimidine Low_complexity Low_complexity 3 36 0 5 886 5162 176 9 1 chr17 39485324 39486210 -55786441 - Lx2 LINE L1 -9 6988 6096 5 886 2021 113 31 104 chr17 39486210 39486480 -55786171 + Lx2 LINE L1 5634 5872 -1125 5 886 261 57 0 0 chr17 39486480 39486515 -55786136 + (CAA)n Simple_repeat Simple_repeat 2 36 0 5 886 2021 113 31 104 chr17 39486515 39486668 -55785983 + Lx2 LINE L1 5873 6026 -971 5 886 1490 174 0 11 chr17 39486679 39486958 -55785693 + Lx2 LINE L1 6373 6648 -6 5 886 739 262 43 5 chr17 39488244 39488451 -55784200 - B3 SINE B2 -1 215 1 5 886 6454 50 9 8 chr17 39488528 39489381 -55783270 - MT-int LTR MaLR -425 1538 236 5 886 21 36 0 0 chr17 39489542 39489570 -55783081 + AT_rich Low_complexity Low_complexity 1 28 0 5 886 191 125 25 0 chr17 39490524 39490564 -55782087 + (TTTTC)n Simple_repeat Simple_repeat 4 44 0 5 886 5022 151 63 42 chr17 39490857 39491786 -55780865 + Lx2 LINE L1 5887 6835 -162 5 886 24199 116 10 115 chr17 39491954 39496767 -55775884 + L1Md_F2 LINE L1 562 4796 -1087 5 886 5544 42 0 0 chr17 39496767 39497436 -55775215 + L1Md_T LINE L1 5913 6581 -1 5 886 24199 111 5 132 chr17 39497436 39498249 -55774402 + L1Md_F2 LINE L1 4797 5585 -298 5 886 6898 88 17 20 chr17 39498250 39499249 -55773402 + L1Md_F2 LINE L1 5587 6582 0 5 886 334 283 28 9 chr17 39501155 39501262 -55771389 + Lx7 LINE L1 6356 6464 -1232 1 886 1169 305 77 29 chr17 39501298 39501895 -55770756 + Lx7 LINE L1 6795 7420 -276 1 886 1674 195 40 65 chr17 39501875 39502058 -55770593 - L1_Mur2 LINE L1 -4432 1445 1267 2 886 411 56 0 0 chr17 39502058 39502112 -55770539 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 3 886 1012 89 0 0 chr17 39502112 39502247 -55770404 - B1_Mm SINE Alu -12 135 1 4 886 1674 217 24 26 chr17 39502247 39502620 -55770031 - L1_Mur2 LINE L1 -5820 1266 891 2 886 853 292 44 14 chr17 39502636 39502997 -55769654 - L1_Mur2 LINE L1 -6292 794 375 2 886 301 341 68 15 chr17 39503187 39503452 -55769199 - Lx8 LINE L1 -1603 5870 5592 5 886 1764 203 18 26 chr17 39503587 39503972 -55768679 + Lx3C LINE L1 6593 6974 -2 6 886 257 302 75 33 chr17 39505097 39505217 -55767434 + MTB_Mm LTR MaLR 280 404 -3 7 886 260 203 58 77 chr17 39505550 39505758 -55766893 + RMER17D LTR ERVK 239 442 -447 8 886 4293 211 24 22 chr17 39505806 39506193 -55766458 + MusHAL1 LINE L1 873 1244 -1468 9 886 471 18 0 0 chr17 39506193 39506249 -55766402 + (CAA)n Simple_repeat Simple_repeat 1 56 0 1 886 4293 211 24 22 chr17 39506249 39506891 -55765760 + MusHAL1 LINE L1 1245 1903 -809 9 886 304 389 57 31 chr17 39507229 39507683 -55764968 - Lx9 LINE L1 -780 6864 6399 1 886 537 30 0 0 chr17 39507739 39507806 -55764845 + (CA)n Simple_repeat Simple_repeat 1 67 0 1 886 3257 255 58 6 chr17 39508465 39509420 -55763231 - L1_Mur2 LINE L1 -1649 4228 3234 1 886 498 46 0 0 chr17 39509420 39509485 -55763166 + (TC)n Simple_repeat Simple_repeat 2 66 0 1 886 3257 255 58 6 chr17 39509485 39509661 -55762990 - L1_Mur2 LINE L1 -2644 3233 3039 1 886 6041 99 50 3 chr17 39509669 39509720 -55762931 - L1Md_F2 LINE L1 -13 6569 6519 1 886 210 37 0 0 chr17 39509720 39509747 -55762904 + (CCCCCA)n Simple_repeat Simple_repeat 4 30 0 1 886 6041 99 50 3 chr17 39509747 39510573 -55762078 - L1Md_F2 LINE L1 -64 6518 5652 1 886 2569 246 44 114 chr17 39510574 39511410 -55761241 - L1_Mur2 LINE L1 -2815 3062 2204 1 886 1074 118 0 0 chr17 39511410 39511580 -55761071 + (TTTC)n Simple_repeat Simple_repeat 2 171 0 1 886 2569 246 44 114 chr17 39511580 39511815 -55760836 - L1_Mur2 LINE L1 -3674 2203 2055 1 886 587 39 13 0 chr17 39511815 39511893 -55760758 + (TC)n Simple_repeat Simple_repeat 2 80 0 1 886 207 69 0 0 chr17 39511893 39511921 -55760730 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 886 2569 246 44 114 chr17 39511921 39512137 -55760514 - L1_Mur2 LINE L1 -3823 2054 1864 1 886 289 246 0 0 chr17 39512122 39512191 -55760460 + Lx3A LINE L1 6901 6969 -12 2 886 202 189 0 0 chr17 39512202 39512239 -55760412 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 2 886 499 346 75 40 chr17 39512273 39512499 -55760152 + B4A SINE B4 1 234 -58 2 886 382 336 9 0 chr17 39513065 39513285 -55759366 + URR1A DNA MER1_type 5 226 0 2 886 3518 64 34 2 chr17 39513329 39513801 -55758850 - L1Md_F3 LINE L1 0 6584 6098 2 886 183 250 14 81 chr17 39514196 39514270 -55758381 + L4 LINE RTE 902 970 -1059 2 886 210 105 0 0 chr17 39514391 39514429 -55758222 + (GAAA)n Simple_repeat Simple_repeat 3 40 0 2 886 23 33 0 0 chr17 39515475 39515505 -55757146 + AT_rich Low_complexity Low_complexity 1 30 0 2 886 5062 76 136 6 chr17 39515853 39516568 -55756083 + RLTR13C2 LTR ERVK 1 808 0 2 886 2801 227 31 121 chr17 39517214 39518241 -55754410 - L1_Mur2 LINE L1 -2897 2980 2053 2 886 369 0 0 0 chr17 39518241 39518282 -55754369 + (GA)n Simple_repeat Simple_repeat 1 41 0 3 886 240 86 0 0 chr17 39518282 39518316 -55754335 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 886 2801 227 31 121 chr17 39518316 39518434 -55754217 - L1_Mur2 LINE L1 -3825 2052 1938 2 886 1010 318 40 23 chr17 39519360 39519756 -55752895 - MTC LTR MaLR -3 418 16 3 886 1581 214 39 11 chr17 39519872 39520232 -55752419 + RLTR22_Mur LTR ERVK 22 391 -1457 3 886 627 254 58 16 chr17 39520233 39520421 -55752230 + Lx4A LINE L1 6862 7057 -1 3 886 2246 316 47 30 chr17 39520444 39522052 -55750599 + Lx5 LINE L1 5500 7035 -15 3 886 492 18 0 0 chr17 39522052 39522109 -55750542 + (TAAAA)n Simple_repeat Simple_repeat 3 59 0 3 886 2717 309 37 9 chr17 39522161 39523107 -55749544 - MTC-int LTR MaLR -284 974 3 3 886 516 298 168 30 chr17 39523107 39523477 -55749174 - MTC LTR MaLR 0 421 1 3 886 820 272 116 21 chr17 39523922 39524301 -55748350 - MTC LTR MaLR -2 419 5 3 886 302 75 0 36 chr17 39524314 39524369 -55748282 + (CAA)n Simple_repeat Simple_repeat 2 54 0 3 886 740 297 98 25 chr17 39524402 39524799 -55747852 + Lx7 LINE L1 6936 7361 -335 4 886 561 144 0 0 chr17 39525051 39525169 -55747482 + (GA)n Simple_repeat Simple_repeat 1 118 0 4 886 207 0 0 0 chr17 39525206 39525229 -55747422 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 886 31377 87 29 1 chr17 39525273 39531315 -55741336 - L1Md_F2 LINE L1 -2 6580 358 4 886 321 230 0 0 chr17 39531320 39531394 -55741257 - L1_Mur2 LINE L1 -3863 2014 1941 2 886 491 339 86 21 chr17 39531403 39531683 -55740968 + Lx5 LINE L1 6571 6868 -182 4 886 549 266 164 15 chr17 39532346 39532541 -55740110 - URR1A DNA MER1_type -2 224 1 4 886 1611 221 16 34 chr17 39533313 39533697 -55738954 - Lx3B LINE L1 -5 6968 6592 4 886 400 318 33 29 chr17 39533843 39534086 -55738565 + Lx7 LINE L1 5602 5845 -1851 4 886 946 158 17 17 chr17 39534183 39534357 -55738294 + Lx2 LINE L1 6810 6983 -14 4 886 639 246 17 0 chr17 39534363 39534538 -55738113 - Lx5 LINE L1 -1286 5764 5587 4 886 1698 257 44 70 chr17 39534557 39535104 -55737547 - RLTR20B3 LTR ERVK -44 533 1 5 886 229 259 24 36 chr17 39535106 39535190 -55737461 - Lx5 LINE L1 -287 5590 5508 4 886 1402 115 0 0 chr17 39535192 39535409 -55737242 - L1_Mus2 LINE L1 0 6566 6350 5 886 23 0 0 0 chr17 39535476 39535499 -55737152 + AT_rich Low_complexity Low_complexity 1 23 0 5 886 769 228 29 0 chr17 39535519 39535690 -55736961 - Lx LINE L1 -5 6649 6474 5 886 280 270 14 0 chr17 39535699 39535773 -55736878 + MTC-int LTR MaLR 1180 1254 -4 5 886 912 306 67 14 chr17 39535782 39536143 -55736508 + MTC LTR MaLR 6 385 -36 5 886 1268 273 26 11 chr17 39537109 39537565 -55735086 - Lx2B LINE L1 -8 7050 6483 5 886 225 378 54 41 chr17 39537657 39537974 -55734677 - Lx9 LINE L1 -983 6661 6341 5 886 233 322 11 0 chr17 39537977 39538064 -55734587 + (CATA)n Simple_repeat Simple_repeat 2 89 0 5 886 498 248 17 17 chr17 39538628 39538747 -55733904 - B1_Mur4 SINE Alu -7 143 25 5 886 21 71 0 0 chr17 39539205 39539247 -55733404 + AT_rich Low_complexity Low_complexity 1 42 0 5 886 9296 243 34 27 chr17 39539274 39542899 -55729752 + Lx5 LINE L1 3394 7049 -1 6 886 279 0 0 0 chr17 39543002 39543033 -55729618 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 886 246 267 0 45 chr17 39543971 39544081 -55728570 + A-rich Low_complexity Low_complexity 6 110 0 6 886 219 23 22 65 chr17 39544095 39544141 -55728510 + (CAAAAA)n Simple_repeat Simple_repeat 5 48 0 6 886 931 107 8 0 chr17 39545339 39545470 -55727181 + B1_Mm SINE Alu 2 133 -14 6 886 467 262 152 15 chr17 39547500 39547698 -55724953 - URR1A DNA MER1_type -1 225 1 6 886 188 100 0 24 chr17 39548132 39548173 -55724478 + (CCCA)n Simple_repeat Simple_repeat 1 40 0 6 886 267 217 16 48 chr17 39548180 39548243 -55724408 + Lx5 LINE L1 6224 6284 -766 6 886 1354 299 44 68 chr17 39548228 39548814 -55723837 + Lx5 LINE L1 6477 7048 -2 6 886 278 371 66 27 chr17 39548890 39549222 -55723429 + Lx6 LINE L1 7050 7394 -66 6 886 198 103 0 0 chr17 39549260 39549289 -55723362 + (CATA)n Simple_repeat Simple_repeat 2 30 0 6 886 445 239 187 0 chr17 39550009 39550164 -55722487 - URR1A DNA MER1_type -6 220 37 7 886 653 251 73 28 chr17 39550714 39550953 -55721698 + MTC LTR MaLR 163 419 -2 7 886 499 331 165 43 chr17 39551398 39551773 -55720878 + MTC LTR MaLR 1 421 0 7 886 2786 317 23 11 chr17 39551772 39552800 -55719851 + MTC-int LTR MaLR 2 971 -287 7 886 2130 313 32 27 chr17 39552820 39554467 -55718184 - Lx5 LINE L1 0 7050 5500 7 886 36363 34 0 0 chr17 39554490 39559781 -55712870 - L1Md_T LINE L1 -2 6580 1289 7 886 3739 89 9 4 chr17 39559759 39560302 -55712349 - L1Md_T LINE L1 -5739 985 440 7 886 1073 244 85 33 chr17 39560320 39560650 -55712001 - Lx4A LINE L1 0 7058 6712 7 886 688 248 21 0 chr17 39560645 39560790 -55711861 - Lx4A LINE L1 -478 6580 6433 7 886 24 0 0 0 chr17 39560881 39560905 -55711746 + AT_rich Low_complexity Low_complexity 1 24 0 7 886 1039 204 80 17 chr17 39560913 39561152 -55711499 - RLTR22_Mur LTR ERVK -5 1843 1590 7 886 2925 190 103 35 chr17 39561450 39562198 -55710453 - RLTR22_Mur LTR ERVK -1047 801 3 7 886 1209 206 34 52 chr17 39562324 39562652 -55709999 - RLTRETN_Mm LTR ERVK 0 322 1 7 886 407 120 0 96 chr17 39562654 39562737 -55709914 - ETnERV2-int LTR ERVK -3 7403 7329 7 886 343 265 274 17 chr17 39562737 39563029 -55709622 - RLTR13D6 LTR ERVK -365 537 171 7 886 7926 232 86 91 chr17 39563029 39566399 -55706252 - MMETn-int LTR ERVK -337 4507 1146 8 886 1256 44 0 0 chr17 39566399 39566558 -55706093 + L1Md_A LINE L1 6422 6580 -2 8 886 7926 232 86 91 chr17 39566558 39567445 -55705206 - MMETn-int LTR ERVK -3699 1145 273 8 886 405 115 0 0 chr17 39567448 39567526 -55705125 + (T)n Simple_repeat Simple_repeat 1 78 0 8 886 437 300 7 35 chr17 39567529 39567674 -55704977 + MTC LTR MaLR 281 421 0 8 886 4863 147 24 9 chr17 39567684 39568527 -55704124 - RLTR13A LTR ERVK 0 855 1 8 886 2756 246 43 59 chr17 39569453 39569582 -55703069 + L1_Mur2 LINE L1 1922 2054 -3823 8 886 347 41 20 0 chr17 39569582 39569631 -55703020 + (CA)n Simple_repeat Simple_repeat 2 51 0 8 886 2756 246 43 59 chr17 39569631 39570329 -55702322 + L1_Mur2 LINE L1 2055 2739 -3138 8 886 201 74 0 0 chr17 39570329 39570356 -55702295 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 886 2756 246 43 59 chr17 39570356 39570470 -55702181 + L1_Mur2 LINE L1 2740 2837 -3040 8 886 546 16 0 0 chr17 39570470 39570533 -55702118 + (TA)n Simple_repeat Simple_repeat 1 63 0 8 886 2756 214 44 42 chr17 39570533 39570691 -55701960 + L1_Mur2 LINE L1 2838 3038 -3108 8 886 231 190 0 0 chr17 39570962 39571020 -55701631 + T-rich Low_complexity Low_complexity 1 58 0 8 886 4518 106 9 1 chr17 39571026 39571689 -55700962 - L1_Mus1 LINE L1 0 6567 5900 9 886 25 51 0 0 chr17 39572345 39572384 -55700267 + AT_rich Low_complexity Low_complexity 1 39 0 9 886 996 96 7 0 chr17 39573183 39573319 -55699332 + B1_Mus2 SINE Alu 1 137 -10 9 886 678 109 0 0 chr17 39574403 39574522 -55698129 + (TAAA)n Simple_repeat Simple_repeat 3 121 0 9 886 2014 135 3 3 chr17 39574524 39574835 -55697816 - L1_Mus4 LINE L1 -261 6375 6065 9 886 186 43 0 0 chr17 39574862 39574885 -55697766 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 886 3073 163 12 12 chr17 39574933 39575504 -55697147 - L1_Mus4 LINE L1 -1 6635 6065 9 886 246 32 0 0 chr17 39576100 39576131 -55696520 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 886 186 279 14 56 chr17 39576255 39576327 -55696324 - L4 LINE RTE -1059 970 902 9 886 382 356 5 24 chr17 39576770 39576983 -55695668 - URR1A DNA MER1_type -13 213 5 9 886 245 300 0 0 chr17 39577843 39577913 -55694738 - Lx3A LINE L1 -12 6969 6900 1 886 756 264 17 75 chr17 39577908 39578111 -55694540 + L1_Mur2 LINE L1 1868 2058 -3819 1 886 315 0 0 0 chr17 39578111 39578146 -55694505 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 886 351 0 0 0 chr17 39578146 39578184 -55694467 + (GA)n Simple_repeat Simple_repeat 2 40 0 1 886 756 264 17 75 chr17 39578184 39578339 -55694312 + L1_Mur2 LINE L1 2059 2205 -3672 1 886 786 120 0 0 chr17 39578376 39578501 -55694150 + (GAAA)n Simple_repeat Simple_repeat 3 127 0 1 886 6431 245 44 23 chr17 39578501 39579335 -55693316 + L1_Mur2 LINE L1 2199 3027 -2850 1 886 6415 91 27 3 chr17 39579335 39580233 -55692418 + L1Md_F2 LINE L1 5651 6569 -13 1 886 6431 245 44 23 chr17 39580233 39580425 -55692226 + L1_Mur2 LINE L1 3028 3232 -2645 1 886 636 14 0 0 chr17 39580425 39580498 -55692153 + (GA)n Simple_repeat Simple_repeat 2 74 0 1 886 6431 245 44 23 chr17 39580498 39581565 -55691086 + L1_Mur2 LINE L1 3233 4337 -1540 1 886 1672 282 54 15 chr17 39581763 39582282 -55690369 - MTC-int LTR MaLR -198 1060 522 1 886 309 340 80 11 chr17 39583239 39583426 -55689225 + L1MD LINE L1 4079 4278 -1868 1 110 6075 148 22 1 chr17 39583582 39585057 -55687594 - L1_Mus3 LINE L1 -142 6496 4985 1 887 5096 85 4 14 chr17 39585066 39585782 -55686869 - L1Md_F2 LINE L1 -1 6581 5873 1 887 14285 131 10 10 chr17 39585782 39588139 -55684512 - L1_Mm LINE L1 -262 5621 3266 1 887 5581 96 4 17 chr17 39588139 39588954 -55683697 - L1Md_F2 LINE L1 0 6582 5779 1 887 32329 107 14 9 chr17 39588954 39595592 -55677059 - L1Md_F3 LINE L1 -17 6567 82 1 887 4218 127 15 1 chr17 39595603 39596320 -55676331 - MusHAL1 LINE L1 -636 2076 1350 1 887 225 0 0 0 chr17 39596345 39596370 -55676281 + (TTTTG)n Simple_repeat Simple_repeat 5 29 0 1 887 1761 200 50 38 chr17 39596370 39597068 -55675583 - L1_Mur1 LINE L1 -4285 1601 904 1 887 497 278 56 0 chr17 39597072 39597198 -55675453 + ETnERV2-int LTR ERVK 7070 7202 -204 1 887 530 284 84 74 chr17 39597594 39598303 -55674348 - L1_Mur1 LINE L1 -6084 900 354 1 887 3108 22 188 0 chr17 39598329 39598729 -55673922 - IAPLTR2_Mm LTR ERVK 0 475 1 1 887 14042 58 12 11 chr17 39598731 39600530 -55672121 - IAPEz-int LTR ERVK -2 6479 4679 1 887 1903 87 8 0 chr17 39600549 39600801 -55671850 - IAPEz-int LTR ERVK -5183 2497 2244 1 887 8995 77 46 34 chr17 39600796 39602419 -55670232 - IAPEz-int LTR ERVK -5004 1477 9 1 887 3153 25 184 0 chr17 39602420 39602821 -55669830 - IAPLTR2_Mm LTR ERVK 0 475 1 1 887 219 40 122 0 chr17 39602866 39602940 -55669711 + (TA)n Simple_repeat Simple_repeat 1 83 0 1 887 8485 17 1 0 chr17 39602940 39603895 -55668756 + RLTR6-int LTR ERV1 6823 7778 0 1 887 2207 120 216 26 chr17 39604004 39604466 -55668185 + RLTR6_Mm LTR ERV1 37 586 -68 1 887 453 330 27 9 chr17 39604680 39604953 -55667698 - Lx7 LINE L1 -15 5865 5586 1 887 2797 24 3 0 chr17 39604963 39605300 -55667351 - ORR1A0 LTR MaLR -8 338 1 1 887 13313 65 14 1 chr17 39605300 39607070 -55665581 - ORR1A0-int LTR MaLR 0 1792 1 1 887 2983 26 3 0 chr17 39607070 39607415 -55665236 - ORR1A0 LTR MaLR 0 346 1 1 887 4259 136 7 12 chr17 39607512 39608436 -55664215 - MusHAL1 LINE L1 -1945 1408 490 1 887 10187 50 0 2 chr17 39608431 39610357 -55662294 - L1Md_F2 LINE L1 -11 6571 4650 1 887 2833 198 14 101 chr17 39610342 39611077 -55661574 - L1VL2 LINE L1 -5571 764 94 1 887 419 48 0 16 chr17 39611162 39611225 -55661426 + (TTTA)n Simple_repeat Simple_repeat 2 63 0 1 887 2765 202 41 10 chr17 39611225 39611816 -55660835 - Lx3A LINE L1 -11 6970 6362 1 887 204 125 0 0 chr17 39611827 39611859 -55660792 + (GAAAA)n Simple_repeat Simple_repeat 3 34 0 1 887 256 315 75 11 chr17 39612219 39612312 -55660339 + B1_Mur4 SINE Alu 45 143 -7 1 887 207 0 0 0 chr17 39612322 39612345 -55660306 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 887 854 110 14 0 chr17 39612359 39612504 -55660147 + (GAAA)n Simple_repeat Simple_repeat 4 150 0 1 887 29 28 0 0 chr17 39612519 39612555 -55660096 + AT_rich Low_complexity Low_complexity 1 36 0 1 887 22 56 0 0 chr17 39612650 39612686 -55659965 + AT_rich Low_complexity Low_complexity 1 36 0 1 887 1653 99 8 0 chr17 39613018 39613261 -55659390 - L1_Mm LINE L1 -449 5434 5190 1 887 2540 97 5 5 chr17 39613261 39613634 -55659017 + L1Md_F2 LINE L1 6206 6578 -4 1 887 291 28 0 0 chr17 39614314 39614350 -55658301 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 887 339 306 10 0 chr17 39614761 39614859 -55657792 + Lx9 LINE L1 6765 6863 -781 1 887 4266 209 25 18 chr17 39615199 39615831 -55656820 - MusHAL1 LINE L1 -808 1904 1259 1 887 183 100 0 0 chr17 39615831 39615861 -55656790 + (TTG)n Simple_repeat Simple_repeat 2 31 0 1 887 4266 209 25 18 chr17 39615861 39616252 -55656399 - MusHAL1 LINE L1 -1454 1258 875 1 887 230 160 0 20 chr17 39616308 39616359 -55656292 + GA-rich Low_complexity Low_complexity 1 50 0 1 887 263 321 0 9 chr17 39616359 39616469 -55656182 - L1_Mur1 LINE L1 -3835 2051 1943 1 887 337 338 94 16 chr17 39616491 39616735 -55655916 + Lx6 LINE L1 6966 7228 -232 1 887 290 305 99 25 chr17 39616737 39616858 -55655793 - MTA_Mm LTR MaLR -3 393 264 1 887 528 230 183 21 chr17 39617417 39617608 -55655043 - URR1A DNA MER1_type -4 222 1 1 887 25 0 0 0 chr17 39617726 39617751 -55654900 + AT_rich Low_complexity Low_complexity 1 25 0 1 887 1826 192 16 26 chr17 39618385 39618770 -55653881 - Lx3B LINE L1 -1 6972 6592 1 887 333 297 114 51 chr17 39618891 39619164 -55653487 + Lx8 LINE L1 5578 5867 -13 1 887 2420 255 66 45 chr17 39619359 39620110 -55652541 + L1_Mur2 LINE L1 476 1268 -5818 1 887 1056 94 0 0 chr17 39620110 39620248 -55652403 + B1_Mm SINE Alu 1 138 -9 1 887 209 33 33 0 chr17 39620248 39620278 -55652373 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 887 2420 179 22 123 chr17 39620278 39620478 -55652173 + L1_Mur2 LINE L1 1269 1444 -4433 1 887 3572 115 0 4 chr17 39620558 39621074 -55651577 - L1_Mus1 LINE L1 0 6567 6054 1 887 1289 284 52 43 chr17 39621074 39621629 -55651022 - Lx7 LINE L1 -342 7354 6795 1 887 362 274 28 9 chr17 39621665 39621772 -55650879 - Lx7 LINE L1 -1232 6464 6356 1 887 1032 212 132 40 chr17 39624560 39624864 -55647787 + IAPEY3_LTR LTR ERVK 1 332 0 1 887 1908 128 111 116 chr17 39624864 39625288 -55647363 + MMERVK10C-int LTR ERVK 1 422 -7159 1 887 836 138 7 0 chr17 39625391 39625529 -55647122 + MMERVK10C-int LTR ERVK 708 846 -6735 1 887 734 233 90 6 chr17 39625505 39625682 -55646969 + IAP-d-int LTR ERVK 312 503 -4903 1 887 543 237 237 17 chr17 39625650 39625886 -55646765 + RLTR19-int LTR ERVK 376 663 -5474 1 887 262 211 58 0 chr17 39625880 39625932 -55646719 + RLTR19-int LTR ERVK 950 1004 -983 1 887 267 270 49 20 chr17 39625995 39626097 -55646554 + RLTR19-int LTR ERVK 1462 1566 -6015 1 887 373 140 0 0 chr17 39626114 39626171 -55646480 + IAP-d-int LTR ERVK 447 503 -6039 1 887 1357 134 107 0 chr17 39626171 39626395 -55646256 + IAP-d-int LTR ERVK 5007 5254 -1288 1 887 1615 143 58 35 chr17 39626393 39626705 -55645946 + IAPEY3-int LTR ERVK 6989 7307 -373 1 887 1347 185 64 23 chr17 39626738 39627081 -55645570 + IAP-d-int LTR ERVK 6125 6481 0 1 887 963 201 143 40 chr17 39627081 39627382 -55645269 + IAPEY3_LTR LTR ERVK 1 332 0 1 887 271 125 0 40 chr17 39627468 39627518 -55645133 + MYSERV6-int LTR ERVK 5518 5565 -3394 1 887 4562 120 29 8 chr17 39627976 39629216 -55643435 - L1VL4 LINE L1 -2082 1477 206 1 887 6160 164 34 0 chr17 39629387 39630461 -55642190 - Lx2 LINE L1 -1 6996 5887 1 887 235 250 0 0 chr17 39630750 39630806 -55641845 + A-rich Low_complexity Low_complexity 1 56 0 1 887 25 51 0 0 chr17 39631738 39631777 -55640874 + AT_rich Low_complexity Low_complexity 1 39 0 1 887 816 283 19 5 chr17 39632080 39632286 -55640365 + B3 SINE B2 1 209 -7 1 887 6827 94 20 5 chr17 39633125 39634788 -55637863 - L1Md_F2 LINE L1 -13 6569 4877 1 887 365 297 146 49 chr17 39635095 39635300 -55637351 - ORR1D2 LTR MaLR -127 243 19 1 887 181 355 13 13 chr17 39635316 39635393 -55637258 + L3 LINE CR1 4392 4468 -21 1 887 748 194 0 0 chr17 39635654 39635783 -55636868 + B1_Mur2 SINE Alu 2 130 -19 1 887 234 259 17 0 chr17 39635800 39635858 -55636793 - B2_Mm2 SINE B2 -125 70 12 1 887 434 331 8 32 chr17 39635900 39636025 -55636626 - B1F SINE Alu -8 141 20 1 887 8414 34 1 0 chr17 39636052 39637116 -55635535 - L1Md_T LINE L1 0 6582 5518 1 887 16809 103 37 12 chr17 39637109 39639704 -55632947 - L1Md_T LINE L1 -966 4917 2258 1 887 6636 95 23 5 chr17 39639711 39640944 -55631707 - L1Md_F2 LINE L1 0 6582 5337 1 887 477 269 7 81 chr17 39640946 39641145 -55631506 - ORR1D2-int LTR MaLR -454 1055 745 1 887 545 366 24 14 chr17 39641150 39641438 -55631213 + L1_Mur3 LINE L1 598 888 -6824 1 887 1689 107 291 0 chr17 39641430 39641729 -55630922 - L1_Mus3 LINE L1 -457 6181 5796 1 887 2633 124 19 0 chr17 39641729 39642157 -55630494 + L1_Mus3 LINE L1 6203 6638 0 1 887 227 333 12 0 chr17 39642285 39642366 -55630285 + L1_Mur3 LINE L1 1009 1090 -6622 1 887 614 266 101 0 chr17 39642366 39642524 -55630127 + ORR1C1 LTR MaLR 114 287 -91 1 887 631 250 4 84 chr17 39642549 39642749 -55629902 + RMER17C LTR ERVK 1 183 -227 1 887 833 74 7 22 chr17 39642749 39642887 -55629764 + (TTCC)n Simple_repeat Simple_repeat 4 139 0 1 887 631 250 4 84 chr17 39642887 39642913 -55629738 + RMER17C LTR ERVK 184 209 -201 1 887 635 254 9 58 chr17 39642925 39643151 -55629500 - Lx7 LINE L1 -1826 5870 5656 1 887 286 268 103 14 chr17 39643638 39643814 -55628837 - Lx7 LINE L1 -1691 4189 4001 1 887 492 225 120 0 chr17 39644059 39644201 -55628450 + URR1A DNA MER1_type 62 220 -6 1 887 232 342 80 13 chr17 39644529 39644680 -55627971 - Lx6 LINE L1 -251 7209 7049 1 887 882 317 122 25 chr17 39644753 39645270 -55627381 - Lx5 LINE L1 -7 7043 6477 1 887 357 279 8 90 chr17 39645254 39645376 -55627275 - Lx5 LINE L1 -765 6285 6174 1 887 10946 83 0 37 chr17 39645798 39648043 -55624608 + L1Md_F LINE L1 534 2692 -3191 1 887 4363 80 7 3 chr17 39648043 39648645 -55624006 + L1Md_F2 LINE L1 5975 6578 -4 1 887 607 263 155 0 chr17 39649115 39649309 -55623342 + URR1A DNA MER1_type 1 224 -2 1 887 364 340 64 16 chr17 39649878 39650066 -55622585 - Lx6 LINE L1 -303 7157 6961 1 887 387 237 49 41 chr17 39650085 39650193 -55622458 + L1_Mus4 LINE L1 1940 2050 -3827 1 887 582 28 0 0 chr17 39650193 39650265 -55622386 + (TC)n Simple_repeat Simple_repeat 1 72 0 1 887 299 237 49 41 chr17 39650265 39650279 -55622372 + L1_Mus4 LINE L1 2051 2064 -3813 1 887 362 45 0 0 chr17 39650279 39650323 -55622328 + HAL1-3A_ME LINE L1 1978 2021 -837 1 887 3400 213 42 48 chr17 39650343 39650445 -55622206 + L1_Mus4 LINE L1 2052 2166 -3720 1 887 264 77 0 0 chr17 39650445 39650484 -55622167 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 887 3400 213 42 48 chr17 39650484 39651311 -55621340 + L1_Mus4 LINE L1 2167 2974 -2912 1 887 2677 124 9 2 chr17 39651311 39651732 -55620919 - L1_Mus3 LINE L1 -6 6632 6209 1 887 3400 71 0 0 chr17 39651732 39651831 -55620820 + L1_Mus4 LINE L1 2975 3014 -2872 1 887 5303 242 66 14 chr17 39651838 39653020 -55619631 - Lx5 LINE L1 -715 6343 5132 1 887 183 42 0 0 chr17 39653020 39653044 -55619607 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 887 5303 224 92 5 chr17 39653044 39653895 -55618756 - Lx5 LINE L1 -746 5131 4209 1 887 14056 135 64 8 chr17 39653891 39655389 -55617262 - L1Md_F2 LINE L1 -12 6570 5102 1 887 1024 101 0 0 chr17 39655389 39655528 -55617123 - B1_Mm SINE Alu -8 139 1 1 887 16512 121 30 8 chr17 39655528 39658449 -55614202 - L1Md_F2 LINE L1 -785 5101 1517 1 887 1494 114 122 0 chr17 39658449 39658694 -55613957 - L1Md_F2 LINE L1 -5772 844 570 1 887 575 184 32 8 chr17 39658694 39658820 -55613831 - L1_Mur2 LINE L1 -1654 4223 4095 1 887 947 242 114 9 chr17 39658799 39659133 -55613518 - L1_Mur2 LINE L1 -2108 3769 3401 1 887 614 273 8 0 chr17 39659640 39659772 -55612879 + B1_Mur4 SINE Alu 11 143 -7 1 887 223 149 0 41 chr17 39660128 39660177 -55612474 + A-rich Low_complexity Low_complexity 2 48 0 1 887 484 335 76 51 chr17 39660323 39660359 -55612292 + Lx9 LINE L1 6304 6341 -1303 1 887 393 22 0 0 chr17 39660359 39660405 -55612246 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 887 484 335 76 51 chr17 39660405 39660802 -55611849 + Lx9 LINE L1 6342 6747 -897 1 887 1497 255 30 13 chr17 39660805 39661247 -55611404 + Lx3C LINE L1 6480 6914 -86 2 887 243 0 0 0 chr17 39661797 39661824 -55610827 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2 887 1013 275 100 21 chr17 39662410 39662789 -55609862 - MTC LTR MaLR -8 413 5 2 887 1036 283 80 49 chr17 39662819 39663410 -55609241 + Lx7 LINE L1 6936 7544 -152 2 887 396 0 0 0 chr17 39663468 39663512 -55609139 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 887 424 99 21 21 chr17 39663516 39663609 -55609042 + (CAGAGA)n Simple_repeat Simple_repeat 2 94 0 2 887 406 252 0 0 chr17 39663610 39663717 -55608934 - L1_Mur1 LINE L1 -3840 2046 1940 2 887 573 342 63 11 chr17 39663736 39664005 -55608646 + Lx6 LINE L1 6961 7243 -217 2 887 579 254 161 0 chr17 39664670 39664863 -55607788 - URR1A DNA MER1_type -2 224 1 2 887 1676 218 5 31 chr17 39665641 39666029 -55606622 - Lx3B LINE L1 -4 6969 6592 2 887 544 301 35 22 chr17 39666135 39666416 -55606235 + Lx7 LINE L1 5597 5879 -433 2 887 932 152 17 17 chr17 39666513 39666687 -55605964 + Lx2 LINE L1 6810 6983 -14 2 887 694 239 11 0 chr17 39666693 39666869 -55605782 - Lx5 LINE L1 -1286 5764 5587 2 887 705 288 42 33 chr17 39666891 39667132 -55605519 - RLTR20B3 LTR ERVK -44 533 291 2 887 262 211 85 104 chr17 39667111 39667217 -55605434 - RLTR20B3 LTR ERVK -473 104 1 2 887 305 253 24 0 chr17 39667219 39667302 -55605349 - Lx5 LINE L1 -287 5590 5506 2 887 1643 83 0 0 chr17 39667302 39667520 -55605131 - L1_Mus2 LINE L1 -1 6565 6348 2 887 274 276 52 58 chr17 39667534 39667630 -55605021 + MTC-int LTR MaLR 1083 1174 -84 2 887 812 208 29 0 chr17 39667630 39667803 -55604848 - Lx LINE L1 -7 6647 6470 2 887 274 276 52 58 chr17 39667803 39667879 -55604772 + MTC-int LTR MaLR 1175 1254 -4 2 887 917 321 52 12 chr17 39667904 39668248 -55604403 + MTC LTR MaLR 28 385 -36 2 887 1439 264 42 18 chr17 39669096 39669552 -55603099 - Lx2B LINE L1 -8 7050 6483 2 887 295 281 31 0 chr17 39669964 39670060 -55602591 + (CATATA)n Simple_repeat Simple_repeat 4 102 0 2 887 469 274 17 17 chr17 39670601 39670720 -55601931 - B1_Mur4 SINE Alu -7 143 25 2 887 21 71 0 0 chr17 39671175 39671217 -55601434 + AT_rich Low_complexity Low_complexity 1 42 0 2 887 5602 202 25 34 chr17 39671238 39672662 -55599989 + L1_Mur2 LINE L1 3388 4798 -1079 2 887 247 133 0 0 chr17 39673734 39673794 -55598857 + L1_Mus4 LINE L1 6574 6633 -3 2 887 1004 97 7 0 chr17 39675450 39675594 -55597057 + B1_Mm SINE Alu 3 147 0 2 887 22 88 0 0 chr17 39675681 39675738 -55596913 + AT_rich Low_complexity Low_complexity 1 57 0 2 887 244 291 114 38 chr17 39677326 39677458 -55595193 - URR1A DNA MER1_type -1 225 84 2 887 229 364 24 32 chr17 39677822 39677947 -55594704 - Lx8 LINE L1 -151 7322 7199 2 887 255 226 15 46 chr17 39677992 39678057 -55594594 + Lx5 LINE L1 6223 6285 -765 2 887 1263 324 49 37 chr17 39678041 39678608 -55594043 + Lx5 LINE L1 6477 7050 0 2 887 432 181 286 20 chr17 39679164 39679257 -55593394 - URR1A DNA MER1_type -32 194 82 2 887 423 0 0 0 chr17 39679257 39679304 -55593347 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 887 342 0 0 0 chr17 39679304 39679341 -55593310 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 887 432 181 286 20 chr17 39679341 39679393 -55593258 - URR1A DNA MER1_type -145 81 10 2 887 549 313 11 53 chr17 39680205 39680530 -55592121 + Lx7 LINE L1 5548 5870 -1826 2 887 639 133 0 0 chr17 39680543 39680648 -55592003 + (GA)n Simple_repeat Simple_repeat 2 106 0 2 887 487 250 15 118 chr17 39680650 39680922 -55591729 - RMER17C LTR ERVK -166 244 1 2 887 586 300 94 0 chr17 39680934 39681104 -55591547 - ORR1C1 LTR MaLR -79 299 114 2 887 388 298 64 0 chr17 39681104 39681245 -55591406 - L1_Mur3 LINE L1 -6622 1090 941 2 887 2691 110 38 0 chr17 39681316 39681733 -55590918 - L1_Mus3 LINE L1 -3 6635 6203 2 887 1290 89 345 0 chr17 39681733 39682020 -55590631 + L1_Mus3 LINE L1 5796 6181 -457 2 887 517 345 39 26 chr17 39682052 39682359 -55590292 - L1_Mur3 LINE L1 -6861 851 541 2 887 649 204 6 51 chr17 39682365 39682535 -55590116 + ORR1B2-int LTR MaLR 798 1085 -424 2 887 241 130 107 36 chr17 39682546 39682602 -55590049 + ORR1B2 LTR MaLR 294 353 -14 2 887 1179 250 53 40 chr17 39682616 39683165 -55589486 + L1_Mur3 LINE L1 1215 1770 -4110 2 887 34084 74 2 4 chr17 39684026 39688659 -55583992 - L1Md_F2 LINE L1 0 6585 1966 2 887 405 0 0 0 chr17 39688659 39688704 -55583947 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 887 34084 80 2 14 chr17 39688704 39690317 -55582334 - L1Md_F2 LINE L1 -3921 1965 273 2 887 4421 191 26 1 chr17 39690430 39691407 -55581244 - L1_Mur2 LINE L1 -2563 3314 2314 2 887 1574 268 14 47 chr17 39691405 39691964 -55580687 + Lx4A LINE L1 5710 6250 -808 2 887 19187 109 2 1 chr17 39691973 39695286 -55577365 - L1Md_Gf LINE L1 -1813 4073 703 2 887 5171 104 20 11 chr17 39695288 39696053 -55576598 + L1Md_F2 LINE L1 5799 6570 -12 2 887 282 274 0 52 chr17 39696056 39696168 -55576483 + MTC LTR MaLR 267 371 -25 2 887 455 336 42 54 chr17 39696172 39696411 -55576240 - Lx5 LINE L1 -204 6846 6611 2 887 3971 217 40 60 chr17 39696429 39696525 -55576126 + L1_Mur1 LINE L1 1952 2046 -3840 2 887 726 101 0 0 chr17 39696525 39696634 -55576017 + (TC)n Simple_repeat Simple_repeat 2 110 0 2 887 4003 209 45 35 chr17 39696634 39697722 -55574929 + L1_Mur1 LINE L1 2047 3112 -2774 2 887 3441 237 53 42 chr17 39697986 39698872 -55573779 + RMER13B LTR ERVK 4 899 -9 2 887 710 330 68 45 chr17 39698959 39699476 -55573175 - Lx9 LINE L1 -783 6861 6333 2 887 372 133 0 0 chr17 39700478 39700538 -55572113 + (TAA)n Simple_repeat Simple_repeat 3 62 0 2 887 21 71 0 0 chr17 39700545 39700587 -55572064 + AT_rich Low_complexity Low_complexity 1 42 0 2 887 517 255 146 9 chr17 39700595 39700828 -55571823 - RLTR10A LTR ERVK 0 411 147 2 887 834 189 0 0 chr17 39701061 39701241 -55571410 + CT-rich Low_complexity Low_complexity 1 180 0 2 887 243 0 0 0 chr17 39701241 39701268 -55571383 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2 887 189 0 0 0 chr17 39701278 39701299 -55571352 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 2 887 260 387 0 0 chr17 39701315 39701452 -55571199 - B1_Mur4 SINE Alu -13 137 1 2 887 22 0 0 0 chr17 39701703 39701725 -55570926 + AT_rich Low_complexity Low_complexity 1 22 0 2 887 33 45 0 29 chr17 39701740 39701764 -55570887 + AT_rich Low_complexity Low_complexity 1 24 0 2 887 3237 178 12 2 chr17 39701764 39702348 -55570303 + Lx3A LINE L1 6383 6972 -9 2 887 33 45 0 29 chr17 39702348 39702392 -55570259 + AT_rich Low_complexity Low_complexity 1 43 0 2 887 4111 154 63 33 chr17 39702473 39704024 -55568627 + L1VL2 LINE L1 94 1670 -1945 2 887 525 296 39 36 chr17 39704119 39704399 -55568252 + Lx7 LINE L1 5589 5869 -1827 2 887 237 327 10 29 chr17 39704658 39704762 -55567889 + L1_Mur1 LINE L1 362 463 -6519 2 887 920 292 41 65 chr17 39704832 39705449 -55567202 + L1_Mur1 LINE L1 185 989 -5993 2 887 195 167 0 0 chr17 39705514 39705556 -55567095 + CT-rich Low_complexity Low_complexity 2 43 0 2 887 207 0 0 0 chr17 39705568 39705591 -55567060 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 887 270 301 95 21 chr17 39705595 39705690 -55566961 - B1_Mur4 SINE Alu -6 144 43 2 887 3014 197 18 11 chr17 39706071 39706682 -55565969 + Lx3A LINE L1 6357 6971 -10 2 887 212 86 0 28 chr17 39706688 39706724 -55565927 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 2 887 4362 156 35 50 chr17 39706805 39708418 -55564233 + L1VL2 LINE L1 94 1670 -1945 2 887 413 299 62 26 chr17 39708422 39708791 -55563860 + Lx7 LINE L1 5522 5870 -1826 2 887 384 291 44 14 chr17 39709048 39709360 -55563291 + L1_Mur1 LINE L1 518 833 -6151 2 887 2311 242 83 59 chr17 39709554 39710804 -55561847 + L1_Mur1 LINE L1 702 2000 -3886 2 887 861 54 0 0 chr17 39710804 39710915 -55561736 + (GAA)n Simple_repeat Simple_repeat 3 113 0 2 887 2311 230 125 99 chr17 39710915 39711235 -55561416 + L1_Mur1 LINE L1 2001 2303 -3583 2 887 1412 196 8 5 chr17 39711229 39711504 -55561147 - L1Md_F LINE L1 -6062 557 304 2 887 248 315 51 62 chr17 39712015 39712191 -55560460 - L1MCa LINE L1 -6005 503 330 2 887 23 33 0 0 chr17 39712434 39712464 -55560187 + AT_rich Low_complexity Low_complexity 1 30 0 2 887 207 157 0 0 chr17 39712773 39712824 -55559827 + T-rich Low_complexity Low_complexity 1 51 0 2 887 364 333 68 20 chr17 39712874 39713021 -55559630 - B4A SINE B4 -138 154 1 2 887 245 160 39 26 chr17 39713045 39713122 -55559529 + (TTA)n Simple_repeat Simple_repeat 1 78 0 2 887 4467 58 17 24 chr17 39713258 39713846 -55558805 + L1Md_F2 LINE L1 5889 6472 -110 2 888 192 40 0 0 chr17 39714904 39714929 -55557722 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 888 2953 236 43 90 chr17 39715480 39715635 -55557016 - L1_Mur2 LINE L1 -3083 3063 2895 2 888 1101 96 7 0 chr17 39715635 39715781 -55556870 - B1_Mm SINE Alu 0 147 1 2 888 2953 213 40 121 chr17 39715781 39716778 -55555873 - L1_Mur2 LINE L1 -2983 2894 1961 2 888 522 194 16 16 chr17 39716779 39716905 -55555746 + RLTR22_Mur LTR ERVK 681 806 -1042 2 888 1017 230 86 42 chr17 39717101 39717414 -55555237 + RLTR22_Mur LTR ERVK 1512 1838 -10 2 888 676 189 162 7 chr17 39717499 39717653 -55554998 + Lx4A LINE L1 6403 6580 -478 2 888 1386 232 44 24 chr17 39717648 39717988 -55554663 + Lx4A LINE L1 6712 7058 0 2 888 2433 310 27 22 chr17 39718016 39719649 -55553002 + Lx5 LINE L1 5501 7042 -8 2 888 2574 290 41 24 chr17 39719706 39720552 -55552099 - MTC-int LTR MaLR -288 970 58 2 888 2900 171 27 66 chr17 39720560 39721260 -55551391 - L1Md_F2 LINE L1 -1 6581 5909 2 888 30998 106 16 7 chr17 39721312 39727144 -55545507 - L1Md_F2 LINE L1 -291 6291 404 2 888 238 226 48 0 chr17 39727146 39727208 -55545443 - MTC-int LTR MaLR -1189 69 5 2 888 1907 245 23 7 chr17 39727531 39728095 -55544556 + L1_Mur2 LINE L1 3502 4074 -1803 2 888 216 97 0 0 chr17 39728095 39728126 -55544525 + (TTTC)n Simple_repeat Simple_repeat 1 31 0 2 888 871 169 6 6 chr17 39728134 39728312 -55544339 + CT-rich Low_complexity Low_complexity 3 180 0 2 888 871 264 4 32 chr17 39728313 39728591 -55544060 + L1_Mur2 LINE L1 4061 4330 -1547 2 888 3686 250 61 19 chr17 39728752 39729815 -55542836 - MTC-int LTR MaLR -150 1108 1 2 888 790 332 51 60 chr17 39729900 39730252 -55542399 - MTC LTR MaLR -60 361 13 2 888 4412 122 3 5 chr17 39730521 39731161 -55541490 - L1_Mus4 LINE L1 -149 6487 5849 2 888 18755 170 23 18 chr17 39731155 39733895 -55538756 + L1_Mus3 LINE L1 2169 4925 -958 2 888 2034 107 3 0 chr17 39733895 39734195 -55538456 - L1_Mus2 LINE L1 0 6566 6266 2 888 18755 157 14 11 chr17 39734195 39735303 -55537348 + L1_Mus3 LINE L1 4926 6034 -604 2 888 3348 251 48 8 chr17 39735291 39736239 -55536412 - Lx4A LINE L1 -364 6694 5710 2 888 4381 188 36 2 chr17 39736237 39736895 -55535756 + L1_Mur2 LINE L1 2314 2983 -2894 2 888 3686 64 10 8 chr17 39736895 39737381 -55535270 + L1Md_F2 LINE L1 6093 6579 -3 3 888 4381 188 36 2 chr17 39737381 39737690 -55534961 + L1_Mur2 LINE L1 2984 3313 -2564 2 888 1154 256 49 35 chr17 39738657 39739143 -55533508 - L1_Mur3 LINE L1 -4110 1770 1278 3 888 189 0 0 0 chr17 39739143 39739164 -55533487 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 888 22 0 0 0 chr17 39739169 39739191 -55533460 + AT_rich Low_complexity Low_complexity 1 22 0 3 888 239 167 107 36 chr17 39739232 39739288 -55533363 - ORR1B2 LTR MaLR -14 353 294 3 888 493 265 6 45 chr17 39739291 39739456 -55533195 - ORR1B1-int LTR MaLR -423 1086 804 3 888 670 366 56 14 chr17 39739456 39739811 -55532840 + L1_Mur3 LINE L1 519 888 -6824 3 888 1158 144 291 0 chr17 39739803 39740102 -55532549 - L1_Mus3 LINE L1 -457 6181 5796 3 888 2554 140 16 0 chr17 39740102 39740531 -55532120 + L1_Mus3 LINE L1 6203 6638 0 3 888 246 309 0 0 chr17 39740664 39740732 -55531919 + L1_Mur3 LINE L1 1009 1076 -6636 3 888 657 265 94 0 chr17 39740745 39740915 -55531736 + ORR1C1 LTR MaLR 114 299 -79 3 888 491 243 13 89 chr17 39740927 39741085 -55531566 + RMER17C LTR ERVK 1 146 -264 3 888 7104 43 9 1 chr17 39741392 39742303 -55530348 - L1Md_T LINE L1 0 6585 5693 3 888 1842 93 0 7 chr17 39742284 39742554 -55530097 - L1Md_T LINE L1 -6169 353 86 3 888 25 51 0 0 chr17 39742603 39742642 -55530009 + AT_rich Low_complexity Low_complexity 1 39 0 3 888 2755 84 5 10 chr17 39743018 39743413 -55529238 + L1Md_F2 LINE L1 6179 6571 -11 3 888 195 129 0 0 chr17 39743946 39743977 -55528674 + (T)n Simple_repeat Simple_repeat 1 31 0 3 888 696 64 0 0 chr17 39744068 39744162 -55528489 + (TG)n Simple_repeat Simple_repeat 1 94 0 3 888 5421 208 31 32 chr17 39744285 39745684 -55526967 - L1_Mur2 LINE L1 -1093 4784 3388 3 888 21 71 0 0 chr17 39745705 39745747 -55526904 + AT_rich Low_complexity Low_complexity 1 42 0 3 888 466 291 23 30 chr17 39746180 39746311 -55526340 + B1_Mur4 SINE Alu 14 143 -7 3 888 306 50 0 0 chr17 39746867 39746907 -55525744 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 888 262 351 62 33 chr17 39746991 39747281 -55525370 + Lx8 LINE L1 6371 6664 -980 3 888 1365 282 33 3 chr17 39747367 39747802 -55524849 + Lx3C LINE L1 6480 7022 -36 3 888 24 32 0 0 chr17 39747816 39747847 -55524804 + AT_rich Low_complexity Low_complexity 1 31 0 3 888 999 302 49 30 chr17 39748845 39749210 -55523441 - MTC LTR MaLR -22 399 28 3 888 803 196 28 6 chr17 39749321 39749501 -55523150 + Lx LINE L1 6470 6653 -1 3 888 231 114 0 0 chr17 39749516 39749551 -55523100 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 888 1462 119 5 0 chr17 39749629 39749847 -55522804 + L1_Mus2 LINE L1 6348 6566 0 3 888 335 222 25 0 chr17 39749849 39749930 -55522721 + Lx4B LINE L1 5508 5590 -287 3 888 1759 253 42 68 chr17 39749932 39750479 -55522172 + RLTR20B3 LTR ERVK 1 533 -44 3 888 463 295 35 0 chr17 39750503 39750676 -55521975 + Lx4B LINE L1 5593 5771 -1287 3 888 877 168 142 10 chr17 39750674 39750879 -55521772 - Lx2 LINE L1 -1 6996 6765 3 888 3623 181 35 11 chr17 39750871 39751580 -55521071 - Lx2 LINE L1 -355 6642 5917 3 888 2852 256 96 33 chr17 39751569 39752804 -55519847 - L1_Mur2 LINE L1 -4252 1625 375 3 888 571 302 35 33 chr17 39753036 39753387 -55519264 - Lx7 LINE L1 -1851 5845 5463 3 888 1627 215 5 28 chr17 39753423 39753810 -55518841 + Lx3B LINE L1 6592 6969 -4 3 888 600 255 50 0 chr17 39754617 39754778 -55517873 + URR1A DNA MER1_type 56 224 -2 3 888 226 309 24 36 chr17 39755347 39755431 -55517220 - Lx5 LINE L1 -397 6653 6571 3 888 3849 213 36 34 chr17 39755440 39755548 -55517103 + L1_Mus4 LINE L1 1940 2044 -3842 3 888 663 13 0 0 chr17 39755548 39755624 -55517027 + (TC)n Simple_repeat Simple_repeat 1 76 0 3 888 582 71 0 0 chr17 39755624 39755707 -55516944 + (CA)n Simple_repeat Simple_repeat 1 84 0 3 888 3849 213 36 34 chr17 39755707 39755832 -55516819 + L1_Mus4 LINE L1 2045 2165 -3721 3 888 1143 29 0 0 chr17 39755832 39755971 -55516680 + (CA)n Simple_repeat Simple_repeat 2 140 0 3 888 3849 213 36 34 chr17 39755971 39756770 -55515881 + L1_Mus4 LINE L1 2166 2973 -2913 3 888 2676 119 12 2 chr17 39756770 39757190 -55515461 - L1_Mus3 LINE L1 -6 6632 6209 3 888 3849 81 0 28121 chr17 39757190 39757289 -55515362 + L1_Mus4 LINE L1 2974 2983 -2903 3 888 9922 220 40 81 chr17 39757291 39759294 -55513357 - Lx5 LINE L1 -726 6324 4215 3 888 3683 97 0 4 chr17 39759294 39759802 -55512849 - L1Md_F2 LINE L1 -12 6570 6065 3 888 1143 76 0 0 chr17 39759812 39759970 -55512681 - L1Md_A LINE L1 0 6582 6425 3 888 9922 199 42 102 chr17 39759970 39760034 -55512617 - Lx5 LINE L1 -1663 4214 4184 3 888 989 119 0 0 chr17 39760034 39760177 -55512474 - B1_Mm SINE Alu -4 143 1 3 888 9922 199 42 102 chr17 39760177 39761744 -55510907 - Lx5 LINE L1 -1694 4183 2860 3 888 576 310 7 0 chr17 39762170 39762312 -55510339 + B1_Mur4 SINE Alu 1 143 -7 3 888 180 0 0 0 chr17 39762697 39762717 -55509934 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 888 566 323 60 52 chr17 39762887 39762972 -55509679 + Lx9 LINE L1 6262 6341 -1303 3 888 345 62 0 0 chr17 39762972 39763020 -55509631 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 888 566 323 60 52 chr17 39763020 39763417 -55509234 + Lx9 LINE L1 6342 6747 -897 3 888 1414 290 67 9 chr17 39763420 39763865 -55508786 + Lx3C LINE L1 6480 6950 -26 3 888 21 57 0 0 chr17 39764414 39764449 -55508202 + AT_rich Low_complexity Low_complexity 1 35 0 3 888 871 224 26 41 chr17 39764963 39765234 -55507417 - MTC LTR MaLR -2 419 196 3 888 468 116 0 0 chr17 39765234 39765320 -55507331 + (T)n Simple_repeat Simple_repeat 1 86 0 3 888 4178 13 0 4 chr17 39765327 39765808 -55506843 - L1Md_T LINE L1 0 6582 6104 3 888 6264 9 0 0 chr17 39765810 39766655 -55505996 + L1Md_T LINE L1 5160 6004 -578 3 888 315 345 108 43 chr17 39766655 39766931 -55505720 - MTB LTR MaLR -110 297 5 3 888 894 289 75 58 chr17 39766953 39767538 -55505113 + Lx7 LINE L1 6936 7530 -166 3 888 297 0 0 0 chr17 39767620 39767653 -55504998 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 888 505 108 36 0 chr17 39767668 39767779 -55504872 + (CAGA)n Simple_repeat Simple_repeat 2 116 0 3 888 403 229 0 0 chr17 39767785 39767890 -55504761 - L1_Mur1 LINE L1 -3842 2044 1940 3 888 462 376 56 11 chr17 39767899 39768184 -55504467 + Lx5 LINE L1 6571 6868 -182 3 888 262 280 0 47 chr17 39768196 39768282 -55504369 - MTB_Mm LTR MaLR -43 364 283 3 888 648 234 161 0 chr17 39768844 39769036 -55503615 - URR1A DNA MER1_type -3 223 1 3 888 1720 213 5 31 chr17 39769813 39770200 -55502451 - Lx3B LINE L1 -5 6968 6592 3 888 511 302 33 21 chr17 39770347 39770587 -55502064 + Lx7 LINE L1 5602 5844 -1852 3 888 955 140 17 17 chr17 39770685 39770859 -55501792 + Lx2 LINE L1 6810 6983 -14 3 888 682 244 11 0 chr17 39770865 39771041 -55501610 - Lx5 LINE L1 -1286 5764 5587 3 888 1668 260 40 71 chr17 39771063 39771613 -55501038 - RLTR20B3 LTR ERVK -44 533 1 3 888 301 247 25 0 chr17 39771615 39771696 -55500955 - Lx5 LINE L1 -287 5590 5508 3 888 1393 66 0 0 chr17 39771698 39771879 -55500772 - L1_Mus2 LINE L1 -1 6565 6385 3 888 276 256 46 63 chr17 39771904 39772002 -55500649 + MTC-int LTR MaLR 1083 1174 -84 3 888 771 220 29 0 chr17 39772002 39772175 -55500476 - Lx LINE L1 -6 6648 6471 3 888 276 256 46 63 chr17 39772175 39772251 -55500400 + MTC-int LTR MaLR 1175 1254 -4 3 888 929 294 68 34 chr17 39772260 39772641 -55500010 + MTC LTR MaLR 6 399 -22 3 888 226 305 32 48 chr17 39773455 39773579 -55499072 - Lx2B LINE L1 -5 6995 6874 3 888 1027 248 8 4 chr17 39774096 39774339 -55498312 - Lx3C LINE L1 -247 6729 6486 3 888 280 273 34 0 chr17 39774751 39774839 -55497812 + (CATATA)n Simple_repeat Simple_repeat 4 94 0 3 888 481 265 17 17 chr17 39775399 39775518 -55497133 - B1_Mur4 SINE Alu -7 143 25 3 888 21 71 0 0 chr17 39775973 39776015 -55496636 + AT_rich Low_complexity Low_complexity 1 42 0 3 888 5709 202 19 34 chr17 39776036 39777468 -55495183 + L1_Mur2 LINE L1 3388 4798 -1079 3 888 204 40 0 0 chr17 39778596 39778621 -55494030 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 3 888 950 113 7 0 chr17 39780257 39780399 -55492252 + B1_Mm SINE Alu 3 145 -2 3 888 23 68 0 0 chr17 39780522 39780566 -55492085 + AT_rich Low_complexity Low_complexity 1 44 0 3 888 232 27 26 26 chr17 39781130 39781168 -55491483 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 888 308 279 97 37 chr17 39782143 39782277 -55490374 - URR1A DNA MER1_type -1 225 84 3 888 241 355 24 32 chr17 39782642 39782767 -55489884 - Lx8 LINE L1 -151 7322 7199 3 888 1351 320 45 36 chr17 39782864 39783415 -55489236 + Lx5 LINE L1 6477 7032 -18 3 888 470 209 216 0 chr17 39783988 39784081 -55488570 - URR1A DNA MER1_type -32 194 97 3 888 387 0 0 0 chr17 39784081 39784124 -55488527 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 888 470 209 216 0 chr17 39784124 39784183 -55488468 - URR1A DNA MER1_type -130 96 10 3 888 576 303 12 58 chr17 39784983 39785284 -55487367 + Lx7 LINE L1 5548 5847 -1849 3 888 459 52 0 0 chr17 39785321 39785379 -55487272 + (GA)n Simple_repeat Simple_repeat 2 59 0 3 888 511 289 8 90 chr17 39785394 39785660 -55486991 - RMER17C LTR ERVK -166 244 1 3 888 550 312 94 0 chr17 39785672 39785842 -55486809 - ORR1C1 LTR MaLR -79 299 114 3 888 305 277 12 0 chr17 39785842 39785925 -55486726 - L1_Mur3 LINE L1 -6622 1090 1007 3 888 2715 105 38 0 chr17 39786054 39786472 -55486179 - L1_Mus3 LINE L1 -2 6636 6203 3 888 1277 89 345 0 chr17 39786472 39786759 -55485892 + L1_Mus3 LINE L1 5796 6181 -457 3 888 400 341 34 0 chr17 39786791 39786967 -55485684 - L1_Mur3 LINE L1 -6861 851 670 3 888 632 256 9 84 chr17 39787049 39787275 -55485376 + ORR1B2-int LTR MaLR 877 1085 -424 3 888 241 130 107 36 chr17 39787286 39787342 -55485309 + ORR1B2 LTR MaLR 294 353 -14 3 888 1142 252 52 39 chr17 39787347 39787905 -55484746 + L1_Mur3 LINE L1 1206 1770 -4110 3 888 33948 74 5 2 chr17 39788765 39793364 -55479287 - L1Md_F2 LINE L1 -1 6584 1980 3 888 954 26 0 0 chr17 39793364 39793481 -55479170 + (TG)n Simple_repeat Simple_repeat 2 118 0 3 888 33948 79 4 11 chr17 39793481 39795092 -55477559 - L1Md_F2 LINE L1 -3907 1979 273 3 888 4290 198 22 4 chr17 39795205 39796188 -55476463 - L1_Mur2 LINE L1 -2563 3314 2314 3 888 1563 268 14 47 chr17 39796186 39796745 -55475906 + Lx4A LINE L1 5710 6250 -808 3 888 19409 106 2 10 chr17 39796754 39800005 -55472646 - L1Md_A LINE L1 -1813 4070 858 3 888 288 289 0 62 chr17 39800010 39800026 -55472625 + MTB_Mm LTR MaLR 275 290 -131 3 888 5222 103 20 10 chr17 39800026 39800792 -55471859 + L1Md_F2 LINE L1 5799 6571 -11 3 888 296 260 6 59 chr17 39800792 39800905 -55471746 + MTB_Mm LTR MaLR 267 371 -25 3 888 457 360 34 46 chr17 39800909 39801148 -55471503 - Lx5 LINE L1 -204 6846 6611 3 888 3969 213 39 66 chr17 39801166 39801262 -55471389 + L1_Mur1 LINE L1 1952 2046 -3840 3 888 750 101 0 0 chr17 39801262 39801371 -55471280 + (TC)n Simple_repeat Simple_repeat 2 110 0 3 888 4002 204 45 42 chr17 39801371 39802467 -55470184 + L1_Mur1 LINE L1 2047 3112 -2774 3 888 3466 233 53 42 chr17 39802733 39803617 -55469034 + RMER13B LTR ERVK 6 899 -9 4 888 707 333 68 45 chr17 39803704 39804220 -55468431 - Lx9 LINE L1 -783 6861 6334 4 888 291 114 0 0 chr17 39805232 39805276 -55467375 + (CAA)n Simple_repeat Simple_repeat 2 45 0 4 888 21 71 0 0 chr17 39805285 39805327 -55467324 + AT_rich Low_complexity Low_complexity 1 42 0 4 888 544 247 146 9 chr17 39805335 39805568 -55467083 - RLTR10A LTR ERVK 0 411 147 4 888 883 123 13 0 chr17 39805798 39805952 -55466699 + (TC)n Simple_repeat Simple_repeat 2 157 0 4 888 189 0 0 0 chr17 39805964 39805985 -55466666 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 4 888 325 377 0 28 chr17 39805988 39806130 -55466521 - B1_Mur4 SINE Alu -4 146 9 4 888 407 272 6 55 chr17 39806207 39806390 -55466261 + L1_Mur3 LINE L1 5695 5868 -12 4 888 1086 135 0 0 chr17 39806405 39806583 -55466068 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 4 888 520 318 94 0 chr17 39806749 39806919 -55465732 - ORR1C1 LTR MaLR -79 299 114 4 888 392 310 56 0 chr17 39806919 39807061 -55465590 - L1_Mur3 LINE L1 -6622 1090 941 4 888 2700 107 36 0 chr17 39807132 39807551 -55465100 - L1_Mus3 LINE L1 -2 6636 6203 4 888 1304 82 345 0 chr17 39807551 39807838 -55464813 + L1_Mus3 LINE L1 5796 6181 -457 4 888 432 330 45 32 chr17 39807870 39808117 -55464534 - L1_Mur3 LINE L1 -6861 851 602 4 888 616 261 9 84 chr17 39808128 39808354 -55464297 + ORR1B2-int LTR MaLR 877 1085 -424 4 888 241 130 107 36 chr17 39808365 39808421 -55464230 + ORR1B2 LTR MaLR 294 353 -14 4 888 1202 250 52 39 chr17 39808426 39808984 -55463667 + L1_Mur3 LINE L1 1206 1770 -4110 4 888 34232 75 1 1 chr17 39809846 39814460 -55458191 - L1Md_F2 LINE L1 -1 6584 1968 4 888 447 35 0 0 chr17 39814460 39814517 -55458134 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 888 34232 83 9 10 chr17 39814517 39816116 -55456535 - L1Md_F2 LINE L1 -3919 1967 273 4 888 4211 199 26 10 chr17 39816223 39817215 -55455436 - L1_Mur2 LINE L1 -2556 3321 2314 4 888 1624 264 14 47 chr17 39817213 39817772 -55454879 + Lx4A LINE L1 5710 6250 -808 4 888 19041 106 9 0 chr17 39817781 39821026 -55451625 - L1Md_Gf LINE L1 -1813 4073 703 4 888 5096 111 22 12 chr17 39821028 39821788 -55450863 + L1Md_F2 LINE L1 5799 6566 -16 4 888 252 280 23 47 chr17 39821797 39821883 -55450768 + MTB_Mm LTR MaLR 280 363 -44 4 888 394 345 42 54 chr17 39821910 39822149 -55450502 - Lx5 LINE L1 -204 6846 6611 4 888 810 106 0 0 chr17 39822262 39822385 -55450266 + (TC)n Simple_repeat Simple_repeat 2 124 0 4 888 4147 208 42 29 chr17 39822424 39823472 -55449179 + L1_Mur1 LINE L1 2051 3112 -2774 4 888 675 94 0 0 chr17 39823688 39823784 -55448867 + (TA)n Simple_repeat Simple_repeat 1 96 0 4 888 3352 241 49 42 chr17 39823822 39824694 -55447957 + RMER13B LTR ERVK 4 881 -27 4 888 620 339 71 43 chr17 39824806 39825299 -55447352 - Lx9 LINE L1 -795 6849 6343 4 888 288 77 0 0 chr17 39826311 39826350 -55446301 + (TAA)n Simple_repeat Simple_repeat 3 41 0 4 888 21 71 0 0 chr17 39826357 39826399 -55446252 + AT_rich Low_complexity Low_complexity 1 42 0 4 888 565 249 136 13 chr17 39826407 39826643 -55446008 - RLTR10A LTR ERVK 0 411 147 4 888 546 155 0 0 chr17 39826872 39826969 -55445682 + CT-rich Low_complexity Low_complexity 2 98 0 4 888 262 369 0 14 chr17 39827008 39827151 -55445500 - B1_Mus1 SINE Alu -7 141 1 4 888 35 43 0 28 chr17 39827442 39827468 -55445183 + AT_rich Low_complexity Low_complexity 1 26 0 4 888 3249 177 12 2 chr17 39827468 39828052 -55444599 + Lx3A LINE L1 6383 6972 -9 4 888 35 43 0 28 chr17 39828052 39828096 -55444555 + AT_rich Low_complexity Low_complexity 1 43 0 4 888 4056 153 63 31 chr17 39828177 39829725 -55442926 + L1VL2 LINE L1 94 1670 -1945 4 888 485 309 44 41 chr17 39829812 39830106 -55442545 + L1_Rod LINE L1 5548 5842 -5 4 888 904 297 52 71 chr17 39830359 39831149 -55441502 + L1_Mur1 LINE L1 185 989 -5993 4 888 207 167 0 0 chr17 39831214 39831256 -55441395 + CT-rich Low_complexity Low_complexity 2 43 0 4 888 207 0 0 0 chr17 39831268 39831291 -55441360 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 888 251 295 113 21 chr17 39831302 39831399 -55441252 - B1_Mur4 SINE Alu -13 137 32 4 888 10004 27 1 1 chr17 39831998 39833185 -55439466 + L1Md_T LINE L1 4399 5585 -298 4 888 7909 59 0 1 chr17 39833186 39834181 -55438470 + L1Md_T LINE L1 5587 6580 -2 4 888 3010 194 20 16 chr17 39834530 39835143 -55437508 + Lx3A LINE L1 6357 6971 -10 4 888 212 86 0 28 chr17 39835149 39835185 -55437466 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 4 888 4364 158 35 50 chr17 39835266 39836879 -55435772 + L1VL2 LINE L1 94 1670 -1945 4 888 422 302 44 8 chr17 39836883 39837251 -55435400 + Lx7 LINE L1 5522 5870 -1826 4 888 316 240 0 12 chr17 39837508 39837593 -55435058 + L1_Mur1 LINE L1 688 760 -6222 4 888 356 281 43 41 chr17 39837699 39838013 -55434638 + L1_Mur1 LINE L1 674 833 -6151 4 888 3233 221 81 105 chr17 39838014 39839946 -55432705 + L1_Mur1 LINE L1 702 2580 -3306 4 888 645 264 54 45 chr17 39840491 39840713 -55431938 - URR1A DNA MER1_type -1 225 2 4 888 309 377 50 58 chr17 39841281 39841540 -55431111 - L1MCa LINE L1 -5922 586 330 4 888 24 32 0 0 chr17 39841782 39841813 -55430838 + AT_rich Low_complexity Low_complexity 1 31 0 4 888 25 0 0 0 chr17 39841874 39841899 -55430752 + AT_rich Low_complexity Low_complexity 1 25 0 4 888 312 143 0 0 chr17 39842146 39842202 -55430449 + (T)n Simple_repeat Simple_repeat 1 56 0 4 888 339 336 75 20 chr17 39842252 39842398 -55430253 - B4A SINE B4 -138 154 1 4 888 285 190 25 12 chr17 39842422 39842502 -55430149 + (TTA)n Simple_repeat Simple_repeat 1 81 0 4 888 824 268 13 4 chr17 39842842 39843067 -55429584 - MTB_Mm-int LTR MaLR -791 467 241 4 888 1392 53 0 0 chr17 39843364 39843705 -55428946 + (GAAA)n Simple_repeat Simple_repeat 1 341 0 4 888 552 272 39 15 chr17 39843717 39843922 -55428729 - MTB_Mm-int LTR MaLR -1028 230 21 4 888 442 242 111 22 chr17 39843931 39844066 -55428585 - MTB_Mm LTR MaLR 0 407 261 4 888 581 258 43 0 chr17 39844603 39844766 -55427885 - URR1A DNA MER1_type -1 225 56 4 888 5405 45 1 0 chr17 39845135 39845828 -55426823 + L1_Mm LINE L1 1933 2626 -3257 4 13 3027 46 51 0 chr17 39845830 39846221 -55426430 + IAPLTR2a LTR ERVK 1 411 0 4 889 3510 102 25 36 chr17 39846222 39847054 -55425597 + IAPEz-int LTR ERVK 9 662 -5819 4 889 2074 91 7 0 chr17 39847054 39847330 -55425321 + IAPEz-int LTR ERVK 1359 1636 -4845 4 889 5497 74 16 14 chr17 39847329 39848071 -55424580 + IAPEz-int LTR ERVK 5736 6479 -2 4 889 3058 38 51 0 chr17 39848073 39848464 -55424187 + IAPLTR2a LTR ERVK 1 411 0 4 889 25049 26 0 0 chr17 39848464 39851428 -55421223 + L1Md_T LINE L1 2623 5586 -297 4 889 7892 63 0 0 chr17 39851428 39852423 -55420228 + L1Md_T LINE L1 5587 6581 -1 4 889 1985 144 37 35 chr17 39852533 39852607 -55420044 + RMER17D2 LTR ERVK 378 455 -354 4 889 491 93 23 0 chr17 39852607 39852693 -55419958 + (TCTCTG)n Simple_repeat Simple_repeat 2 89 0 4 889 1985 144 37 35 chr17 39852693 39853049 -55419602 + RMER17D2 LTR ERVK 456 809 0 4 889 21 0 0 0 chr17 39853438 39853459 -55419192 + AT_rich Low_complexity Low_complexity 1 21 0 4 889 295 211 92 0 chr17 39854931 39855040 -55417611 - L1_Mur2 LINE L1 -2895 2982 2864 4 889 202 140 0 23 chr17 39855040 39855084 -55417567 + T-rich Low_complexity Low_complexity 1 43 0 4 889 1083 103 0 0 chr17 39855084 39855229 -55417422 - B1_Mm SINE Alu -2 145 1 4 889 1532 218 38 72 chr17 39855229 39855728 -55416923 - L1_Mur2 LINE L1 -2969 2908 2427 4 889 1491 272 57 35 chr17 39855988 39856546 -55416105 + MTC-int LTR MaLR 2 630 -628 4 889 1679 230 4 75 chr17 39856556 39857060 -55415591 - L1_Mur2 LINE L1 -3450 2427 1960 4 889 518 219 16 0 chr17 39857060 39857183 -55415468 + RLTR22_Mur LTR ERVK 681 805 -1043 4 889 1073 205 91 47 chr17 39857381 39857699 -55414952 + RLTR22_Mur LTR ERVK 1512 1843 -5 4 889 622 209 144 0 chr17 39857788 39857927 -55414724 + Lx4A LINE L1 6422 6580 -478 4 889 1504 235 45 0 chr17 39857922 39858254 -55414397 + Lx4A LINE L1 6712 7058 0 4 889 2544 293 27 23 chr17 39858280 39859791 -55412860 + Lx5 LINE L1 5499 6918 -132 4 889 972 307 43 70 chr17 39859886 39860303 -55412348 - MTC-int LTR MaLR -222 1036 631 4 889 279 0 0 0 chr17 39860361 39860392 -55412259 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 889 510 238 0 15 chr17 39860417 39860549 -55412102 + L1_Mur2 LINE L1 2078 2207 -3670 4 889 320 245 0 9 chr17 39860541 39860648 -55412003 + Lx LINE L1 6549 6654 0 4 889 6960 225 46 42 chr17 39860642 39860924 -55411727 + L1_Mur2 LINE L1 2199 2475 -3402 4 889 1234 96 6 11 chr17 39860924 39861083 -55411568 + B2_Mm1t SINE B2 1 160 -33 4 889 351 44 0 0 chr17 39861083 39861128 -55411523 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 4 889 1234 96 6 11 chr17 39861128 39861147 -55411504 + B2_Mm1t SINE B2 161 178 -15 4 889 195 42 0 0 chr17 39861149 39861173 -55411478 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 889 6960 225 46 42 chr17 39861173 39861258 -55411393 + L1_Mur2 LINE L1 2476 2569 -3308 4 889 306 0 0 0 chr17 39861258 39861292 -55411359 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 4 889 6960 225 46 42 chr17 39861292 39861814 -55410837 + L1_Mur2 LINE L1 2570 3113 -2764 4 889 552 56 0 0 chr17 39861814 39861886 -55410765 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 4 889 6960 225 46 42 chr17 39861886 39862794 -55409857 + L1_Mur2 LINE L1 3114 4056 -1821 4 889 756 61 0 0 chr17 39862794 39862892 -55409759 + (TTC)n Simple_repeat Simple_repeat 3 100 0 4 889 6960 225 46 42 chr17 39862892 39863214 -55409437 + L1_Mur2 LINE L1 4057 4330 -1547 4 889 1102 87 0 0 chr17 39863403 39863552 -55409099 - MusHAL1 LINE L1 -1179 1533 1385 4 889 9156 184 24 69 chr17 39863552 39865855 -55406796 + L1_Mm LINE L1 3585 5785 -98 4 889 7816 77 83 82 chr17 39865848 39866397 -55406254 + L1_Mm LINE L1 4271 4867 -1016 4 889 231 262 47 37 chr17 39866397 39866504 -55406147 - MER72B LTR ERV1 -381 387 280 4 889 7816 77 83 82 chr17 39866504 39867162 -55405489 + L1_Mm LINE L1 4868 5585 -298 4 889 7894 48 4 1 chr17 39867163 39868140 -55404511 + L1Md_F3 LINE L1 5587 6566 -18 4 889 23969 126 11 19 chr17 39868149 39872985 -55399666 + L1_Mus1 LINE L1 1776 6567 0 4 889 2221 11 114 0 chr17 39873022 39873284 -55399367 - RLTR10B LTR ERVK 0 292 1 4 889 1843 77 0 0 chr17 39873284 39873519 -55399132 - MMERVK10C-int LTR ERVK 0 7581 7347 4 889 680 74 213 0 chr17 39873519 39873627 -55399024 - MMERVK10C-int LTR ERVK -2015 5566 5436 4 889 1986 74 22 4 chr17 39873613 39873884 -55398767 - MMERVK10C-int LTR ERVK -7305 276 1 4 889 2222 8 115 0 chr17 39873884 39874145 -55398506 - RLTR10B LTR ERVK 0 292 2 4 889 377 275 110 0 chr17 39874146 39874255 -55398396 + MTC LTR MaLR 76 196 -225 4 889 438 20 0 0 chr17 39875778 39875829 -55396822 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 889 267 177 0 0 chr17 39875874 39875936 -55396715 + (ATG)n Simple_repeat Simple_repeat 2 63 0 4 889 788 285 44 4 chr17 39876162 39876412 -55396239 - ORR1D-int LTR MaLR -1087 283 24 4 889 1578 228 13 41 chr17 39876450 39876839 -55395812 + MTB_Mm LTR MaLR 1 378 -29 4 889 281 277 50 65 chr17 39876854 39877055 -55395596 + Lx7 LINE L1 5825 6022 -1674 4 889 772 303 32 30 chr17 39877390 39877778 -55394873 - Lx7 LINE L1 -1801 5895 5474 4 889 304 238 124 14 chr17 39878055 39878200 -55394451 - Lx7 LINE L1 -1691 4189 4029 4 889 347 276 89 7 chr17 39878542 39878688 -55393963 + URR1A DNA MER1_type 68 225 -1 4 889 381 326 7 22 chr17 39879205 39879343 -55393308 + MTB_Mm LTR MaLR 272 407 0 4 889 547 216 72 24 chr17 39879344 39879510 -55393141 + MTB_Mm-int LTR MaLR 4 177 -1081 4 889 696 292 35 43 chr17 39880269 39880616 -55392035 - Lx9 LINE L1 -500 7144 6801 4 889 271 371 64 7 chr17 39880684 39880825 -55391826 - Lx9 LINE L1 -960 6684 6536 4 889 335 276 0 13 chr17 39881274 39881360 -55391291 - B1_Mm SINE Alu -7 143 59 4 889 5187 178 47 13 chr17 39881364 39882032 -55390619 + L1_Mus4 LINE L1 4813 5519 -364 5 889 6073 74 11 17 chr17 39882032 39882845 -55389806 - RLTR13C2 LTR ERVK 0 808 1 5 889 6236 153 12 3 chr17 39882845 39883947 -55388704 + L1_Mus4 LINE L1 5520 6625 -11 5 889 2331 117 17 3 chr17 39883971 39884323 -55388328 - IAPEY2_LTR LTR ERVK 0 357 1 5 889 5467 96 9 8 chr17 39884323 39885101 -55387550 - IAPEy-int LTR ERVK 0 7513 6735 5 889 3493 83 0 0 chr17 39885090 39885545 -55387106 - IAPEy-int LTR ERVK -1366 6215 5761 5 889 3193 105 2 16 chr17 39885536 39885982 -55386669 - IAPEy-int LTR ERVK -1939 5642 5203 5 889 832 81 35 49 chr17 39886237 39886380 -55386271 - IAPEy-int LTR ERVK -2911 4670 4530 5 889 433 197 21 35 chr17 39886395 39886521 -55386130 - IAPEy-int LTR ERVK -2380 2464 2358 5 889 3267 145 152 2 chr17 39886521 39887134 -55385517 - ETnERV2-int LTR ERVK -3135 4271 3567 5 889 633 210 0 0 chr17 39887160 39887279 -55385372 - ETnERV2-int LTR ERVK -4653 2753 2635 5 889 277 291 0 55 chr17 39887291 39887382 -55385269 - ETnERV2-int LTR ERVK -4867 2539 2454 5 889 497 212 88 0 chr17 39887395 39887508 -55385143 - RMER16-int LTR ERVK -5077 1060 938 5 889 1692 176 97 34 chr17 39887611 39887993 -55384658 - RMER16-int LTR ERVK -4750 656 251 5 889 1736 173 212 25 chr17 39888105 39888589 -55384062 - IAPEy-int LTR ERVK -6629 952 412 5 889 2148 172 38 29 chr17 39888969 39889419 -55383232 - IAPEy-int LTR ERVK -7059 454 1 5 889 2185 124 23 3 chr17 39889419 39889768 -55382883 - IAPEY2_LTR LTR ERVK 0 357 2 5 889 441 0 0 0 chr17 39889768 39889817 -55382834 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 5 889 29917 114 26 14 chr17 39889882 39895865 -55376786 - L1Md_F2 LINE L1 -10 6572 510 5 889 1696 114 0 0 chr17 39895865 39896110 -55376541 + RMER17A LTR ERVK 1 245 -506 5 889 2092 100 3 0 chr17 39896110 39896421 -55376230 - L1_Mm LINE L1 -3954 1929 1618 5 889 1391 230 17 71 chr17 39896452 39896976 -55375675 + RMER17A LTR ERVK 292 787 -22 5 889 2526 282 34 6 chr17 39897188 39897920 -55374731 - Lx7 LINE L1 -594 7102 6350 5 889 595 291 135 74 chr17 39897979 39898395 -55374256 - RMER12 LTR ERVK -94 1228 886 5 889 194 0 0 37 chr17 39898395 39898422 -55374229 + (CAA)n Simple_repeat Simple_repeat 2 27 0 5 889 496 291 135 74 chr17 39898422 39898502 -55374149 - RMER12 LTR ERVK -573 1275 1194 5 889 233 205 62 25 chr17 39898645 39898725 -55373926 - RMER12 LTR ERVK -1101 747 665 5 889 764 89 87 18 chr17 39898710 39898836 -55373815 + B1_Mus1 SINE Alu 16 147 -1 5 889 417 264 29 69 chr17 39898858 39899033 -55373618 - RMER12 LTR ERVK -1197 651 484 5 889 500 298 65 6 chr17 39899075 39899244 -55373407 - RMER12 LTR ERVK -1131 191 13 5 889 37953 49 0 3 chr17 39899407 39906217 -55366434 - L1Md_T LINE L1 0 6585 1 5 889 183 129 0 0 chr17 39907426 39907457 -55365194 + (T)n Simple_repeat Simple_repeat 1 31 0 5 889 4064 154 11 1 chr17 39907464 39908122 -55364529 - Lx2 LINE L1 -9 6988 6325 5 889 433 246 16 8 chr17 39908122 39908245 -55364406 - Lx2 LINE L1 -778 6219 6096 5 889 2133 129 33 26 chr17 39908242 39908481 -55364170 + Lx2 LINE L1 5631 5870 -1127 5 889 234 62 0 0 chr17 39908481 39908513 -55364138 + (CAA)n Simple_repeat Simple_repeat 2 33 0 5 889 2133 129 33 26 chr17 39908513 39908664 -55363987 + Lx2 LINE L1 5871 6024 -973 5 889 1551 156 0 25 chr17 39908677 39908959 -55363692 + Lx2 LINE L1 6373 6647 -7 5 889 7310 85 0 8 chr17 39909940 39910928 -55361723 + L1Md_F2 LINE L1 5589 6568 -14 5 889 6200 154 30 6 chr17 39911785 39912869 -55359782 + Lx2 LINE L1 5887 6996 -1 5 889 4321 120 30 4 chr17 39913037 39914266 -55358385 + L1VL4 LINE L1 206 1471 -2088 5 889 234 0 0 0 chr17 39917394 39917420 -55355231 + (T)n Simple_repeat Simple_repeat 1 26 0 5 889 378 274 9 0 chr17 39917658 39917764 -55354887 + Lx7 LINE L1 6356 6462 -1234 5 889 1160 310 40 31 chr17 39917791 39918347 -55354304 + Lx7 LINE L1 6795 7355 -341 5 889 3480 111 20 2 chr17 39918347 39918851 -55353800 + L1_Mus1 LINE L1 6055 6567 0 5 889 26 0 0 0 chr17 39918855 39918881 -55353770 + AT_rich Low_complexity Low_complexity 1 26 0 5 889 279 211 52 10 chr17 39918953 39919049 -55353602 - L1_Mur2 LINE L1 -4442 1435 1336 5 889 7961 53 2 6 chr17 39919045 39920615 -55352036 - L1Md_F2 LINE L1 -12 6570 5010 5 889 204 44 0 82 chr17 39920657 39920706 -55351945 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 5 889 1028 90 7 33 chr17 39920707 39920857 -55351794 - B1_Mm SINE Alu -1 146 1 5 889 1764 194 5 3 chr17 39920860 39921237 -55351414 - L1_Mur2 LINE L1 -5819 1267 890 5 889 933 288 40 7 chr17 39921253 39921613 -55351038 - L1_Mur2 LINE L1 -6292 794 375 5 889 441 306 74 8 chr17 39921819 39922063 -55350588 - Lx7 LINE L1 -1842 5854 5595 5 889 1478 191 106 26 chr17 39922200 39922549 -55350102 + Lx3B LINE L1 6592 6968 -5 5 889 2951 3 0 0 chr17 39923042 39923372 -55349279 - L1Md_T LINE L1 0 6582 6253 5 889 607 229 167 0 chr17 39923655 39923847 -55348804 + URR1A DNA MER1_type 1 224 -2 5 889 294 280 98 33 chr17 39924407 39924529 -55348122 + MTB_Mm LTR MaLR 274 418 -3 5 889 389 353 55 47 chr17 39924551 39924804 -55347847 - Lx5 LINE L1 -225 6825 6571 5 889 4124 210 46 47 chr17 39924841 39924922 -55347729 + MusHAL1 LINE L1 768 845 -1867 5 889 531 0 0 0 chr17 39924922 39924981 -55347670 + (TC)n Simple_repeat Simple_repeat 1 59 0 5 889 705 70 0 0 chr17 39924981 39925080 -55347571 + (CA)n Simple_repeat Simple_repeat 1 100 0 5 889 4124 210 46 47 chr17 39925080 39925513 -55347138 + MusHAL1 LINE L1 846 1248 -1464 5 889 243 0 0 0 chr17 39925513 39925540 -55347111 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 889 4124 210 46 47 chr17 39925540 39926161 -55346490 + MusHAL1 LINE L1 1249 1902 -810 5 889 347 397 44 28 chr17 39926499 39926958 -55345693 - Lx9 LINE L1 -780 6864 6399 5 889 28 61 0 0 chr17 39928010 39928059 -55344592 + AT_rich Low_complexity Low_complexity 1 49 0 5 889 988 87 12 6 chr17 39928225 39928387 -55344264 + (TTTC)n Simple_repeat Simple_repeat 2 164 0 5 889 298 314 87 10 chr17 39928428 39928531 -55344120 - B1_Mur4 SINE Alu -7 143 33 5 889 186 43 0 0 chr17 39928888 39928911 -55343740 + (T)n Simple_repeat Simple_repeat 1 23 0 5 889 3107 200 11 7 chr17 39928916 39929530 -55343121 + Lx3A LINE L1 6357 6973 -8 5 889 227 256 0 55 chr17 39929535 39929663 -55342988 + A-rich Low_complexity Low_complexity 4 124 0 5 889 3471 186 30 85 chr17 39929664 39930497 -55342154 + L1VL2 LINE L1 94 880 -5455 5 889 3208 117 33 4 chr17 39930489 39931037 -55341614 + MusHAL1 LINE L1 204 767 -1945 5 889 280 323 40 14 chr17 39931041 39931405 -55341246 + Lx7 LINE L1 5522 5864 -1832 5 889 230 250 47 0 chr17 39931674 39931738 -55340913 + Lx3C LINE L1 687 753 -6231 5 889 343 172 0 0 chr17 39931920 39931984 -55340667 + Lx3C LINE L1 690 753 -6231 5 889 241 263 0 0 chr17 39932123 39932180 -55340471 + Lx3C LINE L1 695 751 -6233 5 889 2366 228 41 26 chr17 39932181 39932902 -55339749 + Lx3C LINE L1 702 1438 -4448 5 889 5553 39 9 0 chr17 39932902 39933575 -55339076 + L1Md_T LINE L1 5903 6581 -1 5 889 1507 210 10 26 chr17 39933575 39934121 -55338530 + Lx3C LINE L1 1439 2091 -3795 5 889 3193 101 14 16 chr17 39934121 39934607 -55338044 + RLTR13D6 LTR ERVK 1 485 -417 5 889 1117 161 5 5 chr17 39934607 39934826 -55337825 + Lx3C LINE L1 3257 3475 -2411 5 889 610 159 90 26 chr17 39934831 39934986 -55337665 + L1_Mus3 LINE L1 6472 6636 -2 5 889 223 163 0 39 chr17 39935124 39935175 -55337476 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 5 889 9175 212 75 14 chr17 39935182 39938120 -55334531 + Lx3C LINE L1 3472 6612 -364 5 889 23194 179 16 31 chr17 39938127 39940956 -55331695 + L1_Mus3 LINE L1 503 3481 -2402 5 889 432 0 0 0 chr17 39940956 39941004 -55331647 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 5 889 23194 164 15 9 chr17 39941004 39944138 -55328513 + L1_Mus3 LINE L1 3482 6633 -5 5 889 21 0 0 0 chr17 39944728 39944749 -55327902 + AT_rich Low_complexity Low_complexity 1 21 0 5 889 549 0 0 0 chr17 39944943 39945004 -55327647 + (TA)n Simple_repeat Simple_repeat 2 62 0 5 889 2636 273 61 16 chr17 39945680 39946469 -55326182 + MTC-int LTR MaLR 250 1073 -185 5 889 441 193 13 7 chr17 39946469 39946620 -55326031 + (TA)n Simple_repeat Simple_repeat 2 153 0 5 889 1211 234 50 13 chr17 39946791 39947167 -55325484 - L1_Mur2 LINE L1 -1539 4338 3949 5 889 372 327 18 0 chr17 39947904 39948121 -55324530 + URR1A DNA MER1_type 5 225 -1 5 889 261 103 0 0 chr17 39948571 39948629 -55324022 + L1Md_F3 LINE L1 6525 6582 -2 5 889 5140 58 142 6 chr17 39950469 39951180 -55321471 + RLTR13C2 LTR ERVK 1 808 0 5 889 2374 232 55 13 chr17 39951816 39952036 -55320615 - L1_Mur3 LINE L1 -2897 2980 2740 5 889 189 74 0 0 chr17 39952036 39952063 -55320588 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 889 2374 232 55 13 chr17 39952063 39952585 -55320066 - L1_Mur3 LINE L1 -3138 2739 2201 5 889 642 60 0 0 chr17 39952585 39952668 -55319983 + (CTTTG)n Simple_repeat Simple_repeat 2 84 0 5 889 2374 232 55 13 chr17 39952668 39952718 -55319933 - L1_Mur3 LINE L1 -3677 2200 2154 5 889 872 334 39 24 chr17 39952818 39953229 -55319422 - MTC LTR MaLR -3 418 2 5 889 246 273 13 13 chr17 39953238 39953316 -55319335 - MTC-int LTR MaLR -9 1249 1172 5 889 2573 210 58 43 chr17 39953328 39954000 -55318651 + RLTR22_Mur LTR ERVK 20 701 -1147 5 889 4002 49 4 0 chr17 39954000 39954492 -55318159 - L1Md_F2 LINE L1 -2 6580 6087 5 889 1432 101 0 14 chr17 39954492 39954704 -55317947 - L1Md_F2 LINE L1 -195 6387 6179 5 889 494 176 18 9 chr17 39954704 39954813 -55317838 + RLTR22_Mur LTR ERVK 692 801 -1047 5 889 964 210 81 25 chr17 39955110 39955345 -55317306 + RLTR22_Mur LTR ERVK 1591 1838 -10 5 889 261 217 0 0 chr17 39955452 39955512 -55317139 + Lx4B LINE L1 6422 6481 -577 5 889 1084 312 48 36 chr17 39955515 39955993 -55316658 + Lx5 LINE L1 6559 7042 -8 5 889 21 57 0 0 chr17 39956001 39956036 -55316615 + AT_rich Low_complexity Low_complexity 1 35 0 5 889 457 202 166 65 chr17 39956559 39956728 -55315923 - URR1A DNA MER1_type -32 194 9 5 889 244 299 71 7 chr17 39956959 39957114 -55315537 + L1_Rod LINE L1 4016 4180 -1667 5 889 570 310 15 43 chr17 39957478 39957851 -55314800 + Lx7 LINE L1 5534 5905 -386 5 889 616 213 11 138 chr17 39957859 39957913 -55314738 - RMER17C LTR ERVK -163 247 194 5 889 615 27 0 0 chr17 39957913 39957986 -55314665 + (GGAA)n Simple_repeat Simple_repeat 4 76 0 5 889 616 213 11 138 chr17 39957986 39958214 -55314437 - RMER17C LTR ERVK -217 193 1 5 889 600 272 101 0 chr17 39958226 39958395 -55314256 - ORR1B2 LTR MaLR -80 287 102 5 889 371 303 56 0 chr17 39958395 39958537 -55314114 - L1_Mur3 LINE L1 -6622 1106 957 5 889 2478 121 69 0 chr17 39958609 39959013 -55313638 - L1_Mus3 LINE L1 -4 6634 6203 5 889 1253 78 345 0 chr17 39959013 39959300 -55313351 + L1_Mus3 LINE L1 5796 6181 -457 5 889 489 322 38 9 chr17 39959292 39959505 -55313146 - L1_Mur3 LINE L1 -6824 904 686 5 889 607 205 40 115 chr17 39959587 39959813 -55312838 + ORR1B2-int LTR MaLR 877 1085 -424 5 889 246 94 127 36 chr17 39959824 39959879 -55312772 + ORR1B2 LTR MaLR 294 353 -14 5 889 1286 237 45 38 chr17 39959893 39960427 -55312224 + L1_Mur3 LINE L1 1215 1752 -4128 5 889 4216 189 22 1 chr17 39961405 39962385 -55310266 - L1_Mur2 LINE L1 -2563 3314 2314 5 889 2802 255 43 25 chr17 39962383 39963339 -55309312 + Lx4A LINE L1 5710 6682 -376 5 889 18186 141 15 14 chr17 39963336 39964433 -55308218 - L1_Mus3 LINE L1 -604 6034 4935 5 889 2052 99 24 0 chr17 39964433 39964727 -55307924 + L1_Mus2 LINE L1 6266 6566 0 5 889 18186 158 26 25 chr17 39964727 39967491 -55305160 - L1_Mus3 LINE L1 -949 4934 2169 5 889 3994 129 3 11 chr17 39967485 39968129 -55304522 + L1_Mus4 LINE L1 5849 6487 -149 5 889 852 313 54 60 chr17 39968413 39968749 -55303902 + MTC LTR MaLR 28 361 -60 5 889 760 28 0 19 chr17 39968814 39968922 -55303729 + L1Md_F2 LINE L1 6465 6570 -12 5 889 3531 256 69 17 chr17 39968940 39969993 -55302658 + MTC-int LTR MaLR 1 1108 -150 5 889 2121 276 43 85 chr17 39970151 39970500 -55302151 - L1_Mur2 LINE L1 -1545 4341 4075 5 889 1158 122 0 0 chr17 39970500 39970680 -55301971 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 5 889 5367 235 42 116 chr17 39970680 39972870 -55299781 - L1_Mur2 LINE L1 -1812 4074 2060 5 889 414 0 0 0 chr17 39972870 39972916 -55299735 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 889 5367 234 42 116 chr17 39972916 39973238 -55299413 - L1_Mur2 LINE L1 -3818 2059 1753 5 889 4564 136 54 16 chr17 39973242 39974056 -55298595 - Lx3_Mus LINE L1 -5 7004 6160 5 111 27610 104 5 10 chr17 39974056 39978745 -55293906 + L1Md_F2 LINE L1 923 5586 -297 5 890 6976 99 1 2 chr17 39978745 39979747 -55292904 + L1Md_F2 LINE L1 5587 6582 0 5 890 290 284 46 0 chr17 39979833 39979942 -55292709 + MTC-int LTR MaLR 192 305 -953 5 890 585 178 12 54 chr17 39979942 39980108 -55292543 + FordPrefect DNA Tip100 797 955 -728 5 890 15432 10 15 4 chr17 39983297 39985146 -55287505 + SSU-rRNA_Hsa rRNA rRNA 1 1869 0 6 890 411 106 0 0 chr17 39985774 39985840 -55286811 + (A)n Simple_repeat Simple_repeat 1 66 0 6 890 1634 36 0 0 chr17 39985846 39986039 -55286612 + B2_Mm1t SINE B2 1 193 0 6 890 2183 302 26 45 chr17 39986043 39986803 -55285848 + MTC-int LTR MaLR 291 1036 -222 5 890 527 368 32 41 chr17 39986899 39987336 -55285315 - Lx5 LINE L1 -132 6918 6486 6 890 2245 271 30 7 chr17 39987354 39988406 -55284245 - Lx5 LINE L1 -671 6789 5499 6 890 1315 240 42 3 chr17 39988432 39988766 -55283885 - Lx4A LINE L1 0 7058 6712 6 890 593 162 167 14 chr17 39988761 39988899 -55283752 - Lx4A LINE L1 -478 6580 6422 6 890 1067 192 92 35 chr17 39988990 39989306 -55283345 - RLTR22_Mur LTR ERVK -6 1842 1467 6 890 490 211 16 0 chr17 39989508 39989631 -55283020 - RLTR22_Mur LTR ERVK -1043 805 681 6 890 2865 224 26 68 chr17 39989631 39990618 -55282033 + L1_Mur2 LINE L1 1960 2905 -2972 6 890 20940 103 20 3 chr17 39990622 39994969 -55277682 + L1Md_F LINE L1 98 4376 -1507 6 890 3203 43 8 0 chr17 39994970 39995364 -55277287 + L1Md_F2 LINE L1 6186 6582 0 6 890 1090 96 7 0 chr17 39995388 39995534 -55277117 + B1_Mm SINE Alu 1 147 0 6 890 273 195 36 12 chr17 39995562 39995645 -55277006 + L1_Mur2 LINE L1 2898 2982 -2895 6 890 2249 142 36 20 chr17 39997282 39997648 -55275003 - RMER17D2 LTR ERVK 0 809 439 6 890 517 81 40 0 chr17 39997648 39997747 -55274904 + (CAGA)n Simple_repeat Simple_repeat 2 104 0 6 890 2249 142 36 20 chr17 39997747 39997824 -55274827 - RMER17D2 LTR ERVK -371 438 360 6 890 318 348 81 0 chr17 39997827 39997988 -55274663 - L1MD LINE L1 -1900 4246 4073 6 890 229 280 21 21 chr17 39998285 39998380 -55274271 + URR1A DNA MER1_type 56 150 -76 6 890 410 258 111 22 chr17 39998952 39999087 -55273564 + MTB_Mm LTR MaLR 261 407 0 6 890 556 276 39 15 chr17 39999097 39999303 -55273348 + MTB_Mm-int LTR MaLR 22 232 -1026 6 890 807 165 24 0 chr17 39999303 39999473 -55273178 + CT-rich Low_complexity Low_complexity 1 174 0 6 890 813 276 43 36 chr17 39999718 39999996 -55272655 + MTB_Mm-int LTR MaLR 188 467 -791 6 890 236 157 11 43 chr17 40000335 40000428 -55272223 + (TAA)n Simple_repeat Simple_repeat 1 90 0 1 890 336 347 51 1 chr17 40000452 40000596 -55272055 + B4A SINE B4 1 153 -139 2 890 24 32 0 0 chr17 40000894 40000925 -55271726 + AT_rich Low_complexity Low_complexity 1 31 0 3 890 245 356 46 50 chr17 40001170 40001430 -55271221 + L1MCa LINE L1 330 588 -5920 4 890 637 245 49 49 chr17 40002003 40002226 -55270425 + URR1A DNA MER1_type 1 223 -3 5 890 4510 189 107 44 chr17 40002807 40003377 -55269274 - L1_Mur1 LINE L1 -3304 2582 2009 6 890 1206 89 0 0 chr17 40003377 40003546 -55269105 + (TTC)n Simple_repeat Simple_repeat 2 170 0 7 890 4510 217 71 27 chr17 40003546 40004772 -55267879 - L1_Mur1 LINE L1 -3878 2008 702 6 890 235 282 0 0 chr17 40004773 40004844 -55267807 - L1_Mur1 LINE L1 -6233 751 681 6 890 325 214 9 0 chr17 40004967 40005056 -55267595 - L1_Mur1 LINE L1 -6151 831 688 8 890 318 226 0 0 chr17 40005195 40005280 -55267371 - L1_Mur1 LINE L1 -6238 744 688 8 890 403 308 32 23 chr17 40005582 40005928 -55266723 - L1MA4 LINE L1 -444 5856 5505 9 890 4545 165 20 47 chr17 40005917 40007517 -55265134 - L1VL2 LINE L1 -3922 1964 393 1 890 25 0 0 0 chr17 40007599 40007624 -55265027 + AT_rich Low_complexity Low_complexity 1 25 0 1 890 3278 175 16 5 chr17 40007635 40008243 -55264408 - Lx3A LINE L1 -10 6971 6357 1 890 441 0 0 0 chr17 40008254 40008303 -55264348 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 890 291 267 106 29 chr17 40008651 40008755 -55263896 + B1_Mur4 SINE Alu 33 144 -6 1 890 207 0 0 0 chr17 40008759 40008782 -55263869 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 890 611 78 11 0 chr17 40008812 40008902 -55263749 + (GA)n Simple_repeat Simple_repeat 2 92 0 1 890 928 296 57 52 chr17 40008975 40009764 -55262887 - L1_Mur1 LINE L1 -5993 989 1 1 890 457 308 40 32 chr17 40010029 40010342 -55262309 - Lx7 LINE L1 -381 5910 5589 1 890 4455 129 74 39 chr17 40010408 40011951 -55260700 - L1VL2 LINE L1 -1945 1670 94 1 890 33 25 0 0 chr17 40012030 40012070 -55260581 + AT_rich Low_complexity Low_complexity 1 40 0 2 890 3048 187 14 3 chr17 40012074 40012658 -55259993 - Lx3A LINE L1 -9 6972 6383 2 890 343 379 14 0 chr17 40012971 40013111 -55259540 + B1_Mur4 SINE Alu 1 142 -8 2 890 189 0 0 0 chr17 40013122 40013143 -55259508 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2 890 492 62 0 0 chr17 40013155 40013219 -55259432 + (GA)n Simple_repeat Simple_repeat 2 65 0 2 890 546 16 0 0 chr17 40013219 40013282 -55259369 + (GGAA)n Simple_repeat Simple_repeat 4 66 0 2 890 1296 70 0 0 chr17 40013284 40013456 -55259195 + (GAAA)n Simple_repeat Simple_repeat 4 175 0 2 890 8214 59 0 0 chr17 40013456 40014495 -55258156 - L1_Mm LINE L1 -734 5149 4111 2 890 406 42 0 0 chr17 40014493 40014541 -55258110 + L1Md_F2 LINE L1 5539 5586 -297 2 890 8012 55 1 1 chr17 40014541 40015537 -55257114 + L1Md_F2 LINE L1 5587 6582 0 2 890 24 0 0 0 chr17 40016855 40016879 -55255772 + AT_rich Low_complexity Low_complexity 1 24 0 2 890 327 164 0 0 chr17 40016927 40016988 -55255663 + (ATG)n Simple_repeat Simple_repeat 3 63 0 3 890 733 283 33 17 chr17 40017242 40017483 -55255168 - ORR1B1-int LTR MaLR -1246 263 19 3 890 1620 224 16 31 chr17 40017516 40017899 -55254752 + MTB_Mm LTR MaLR 1 377 -30 3 890 363 292 28 90 chr17 40017914 40018125 -55254526 + Lx7 LINE L1 5825 6022 -1674 3 890 796 294 32 32 chr17 40018460 40018822 -55253829 - Lx7 LINE L1 -1801 5895 5501 3 890 277 239 130 27 chr17 40019123 40019269 -55253382 - Lx7 LINE L1 -1691 4189 4029 3 890 437 242 205 21 chr17 40019566 40019756 -55252895 + URR1A DNA MER1_type 1 225 -1 3 890 344 281 123 8 chr17 40020274 40020396 -55252255 + MTA_Mm LTR MaLR 261 396 0 3 890 559 209 72 0 chr17 40020397 40020550 -55252101 + MTA_Mm-int LTR MaLR 4 167 -1091 3 890 667 303 34 40 chr17 40021316 40021670 -55250981 - Lx9 LINE L1 -500 7144 6793 3 890 229 196 0 0 chr17 40022262 40022308 -55250343 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 3 890 357 272 6 12 chr17 40022318 40022419 -55250232 - B1_Mm SINE Alu -1 149 47 3 890 3182 189 65 1 chr17 40022419 40023080 -55249571 + L1Md_F2 LINE L1 4818 5520 -363 4 890 1875 77 40 0 chr17 40023081 40023353 -55249298 - RLTR13C2 LTR ERVK 0 808 526 4 890 5382 144 14 6 chr17 40023353 40024314 -55248337 - L1_Mus4 LINE L1 -152 6484 5516 4 890 3228 74 2 31 chr17 40024314 40024762 -55247889 + RLTR13C2 LTR ERVK 1 435 -373 4 890 9784 51 0 0 chr17 40024762 40026312 -55246339 - L1Md_Gf LINE L1 -3445 2441 795 4 890 281 156 0 0 chr17 40026311 40026356 -55246295 - L1Md_Gf LINE L1 -5985 634 590 4 890 490 258 0 0 chr17 40026354 40026474 -55246177 - L1Md_Gf LINE L1 -6191 428 309 4 890 455 232 0 0 chr17 40026470 40026565 -55246086 - L1Md_F LINE L1 -6190 329 235 4 890 579 229 11 29 chr17 40026554 40026729 -55245922 - L1VL1 LINE L1 -6121 301 130 4 890 464 148 11 54 chr17 40026730 40026823 -55245828 + RMER17A LTR ERVK 427 515 -236 4 890 2428 158 5 5 chr17 40026825 40027220 -55245431 - Lx2 LINE L1 -507 6490 6096 4 890 2056 120 31 92 chr17 40027217 40027639 -55245012 + Lx2 LINE L1 5631 6026 -971 4 890 1403 189 0 21 chr17 40027650 40027931 -55244720 + Lx2 LINE L1 6373 6647 -7 4 890 763 275 10 0 chr17 40029225 40029432 -55243219 - B3 SINE B2 -7 209 1 4 890 24 32 0 0 chr17 40029735 40029766 -55242885 + AT_rich Low_complexity Low_complexity 1 31 0 5 890 237 67 0 0 chr17 40030212 40030242 -55242409 + L1Md_F2 LINE L1 5556 5585 -298 4 890 7240 84 2 8 chr17 40030243 40031239 -55241412 + L1Md_F2 LINE L1 5587 6576 -6 4 890 23 0 0 0 chr17 40031777 40031800 -55240851 + AT_rich Low_complexity Low_complexity 1 23 0 5 890 6607 145 27 2 chr17 40032086 40033169 -55239482 + Lx2 LINE L1 5887 6996 -1 5 890 4601 123 20 0 chr17 40033338 40034574 -55238077 + L1VL4 LINE L1 206 1471 -2088 5 890 265 146 0 40 chr17 40035045 40035095 -55237556 - MYSERV6-int LTR ERVK -3394 5565 5518 5 890 22 0 0 0 chr17 40035377 40035399 -55237252 + AT_rich Low_complexity Low_complexity 1 22 0 5 890 13864 90 14 8 chr17 40036008 40038010 -55234641 - L1_Mm LINE L1 -1114 4769 2756 5 890 252 59 0 0 chr17 40038684 40038718 -55233933 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 890 1437 32 21 5 chr17 40039234 40039423 -55233228 + L1Md_F3 LINE L1 6393 6584 0 5 890 3997 81 21 21 chr17 40039424 40039990 -55232661 + L1Md_F2 LINE L1 6005 6570 -12 5 890 405 0 0 0 chr17 40040211 40040256 -55232395 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 890 230 56 28 0 chr17 40040521 40040557 -55232094 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 6 890 378 244 57 25 chr17 40040808 40040930 -55231721 + Lx7 LINE L1 6356 6481 -1215 6 890 1404 286 43 32 chr17 40040943 40041496 -55231155 + Lx7 LINE L1 6795 7353 -343 6 890 3631 91 10 0 chr17 40041497 40042002 -55230649 + L1_Mus1 LINE L1 6054 6563 -4 6 890 1253 170 3 93 chr17 40042107 40042277 -55230374 - L1_Mur2 LINE L1 -4461 1416 1269 6 890 210 37 0 0 chr17 40042277 40042304 -55230347 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 890 1019 109 0 0 chr17 40042304 40042442 -55230209 - B1_Mm SINE Alu -9 138 1 6 890 1253 166 6 81 chr17 40042442 40042665 -55229986 - L1_Mur2 LINE L1 -5818 1268 1048 6 890 7705 67 2 0 chr17 40042656 40043646 -55229005 + L1Md_F2 LINE L1 4595 5586 -297 6 890 7925 53 7 3 chr17 40043646 40044638 -55228013 + L1Md_F2 LINE L1 5587 6582 0 6 890 539 296 123 16 chr17 40044638 40044882 -55227769 - L1_Mur2 LINE L1 -6346 740 471 6 890 414 314 67 8 chr17 40045098 40045336 -55227315 - Lx8 LINE L1 -1630 5843 5592 6 890 1996 174 16 24 chr17 40045470 40045853 -55226798 + Lx3B LINE L1 6592 6971 -2 6 890 22 0 0 0 chr17 40045861 40045883 -55226768 + AT_rich Low_complexity Low_complexity 1 22 0 7 890 615 203 188 26 chr17 40046610 40046802 -55225849 + URR1A DNA MER1_type 2 224 -2 7 890 258 236 0 0 chr17 40047351 40047406 -55225245 + MTB_Mm LTR MaLR 274 328 -79 7 890 381 386 36 16 chr17 40047495 40047745 -55224906 - Lx5 LINE L1 -225 6825 6571 7 890 383 56 19 0 chr17 40047831 40047885 -55224766 + (TC)n Simple_repeat Simple_repeat 2 56 0 7 890 216 0 0 0 chr17 40047887 40047911 -55224740 + (CA)n Simple_repeat Simple_repeat 1 24 0 7 890 4461 197 20 36 chr17 40047956 40049004 -55223647 + MusHAL1 LINE L1 874 1904 -808 7 890 358 379 64 36 chr17 40049346 40049784 -55222867 - Lx9 LINE L1 -780 6864 6415 7 890 510 17 0 0 chr17 40049856 40049915 -55222736 + (CA)n Simple_repeat Simple_repeat 1 59 0 7 890 223 274 0 0 chr17 40049929 40049991 -55222660 + (TA)n Simple_repeat Simple_repeat 1 62 0 7 890 31 82 0 0 chr17 40050912 40050985 -55221666 + AT_rich Low_complexity Low_complexity 1 73 0 8 890 922 77 0 27 chr17 40051133 40051280 -55221371 + (TTTC)n Simple_repeat Simple_repeat 2 144 0 8 890 281 324 87 10 chr17 40051321 40051424 -55221227 - B1_Mur4 SINE Alu -7 143 33 8 890 186 43 0 0 chr17 40051798 40051821 -55220830 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 8 890 3219 186 18 5 chr17 40051827 40052436 -55220215 + Lx3A LINE L1 6357 6973 -8 8 890 184 114 68 0 chr17 40052440 40052484 -55220167 + (TAAA)n Simple_repeat Simple_repeat 1 47 0 8 890 4850 138 30 47 chr17 40052573 40054177 -55218474 + L1VL2 LINE L1 94 1670 -1945 8 890 437 325 47 17 chr17 40054178 40054546 -55218105 + L1_Mur3 LINE L1 5486 5862 -18 8 890 327 274 66 71 chr17 40054818 40055128 -55217523 + L1_Mur1 LINE L1 459 756 -6228 8 890 2377 214 119 11 chr17 40055325 40056575 -55216076 + L1_Mur1 LINE L1 702 2091 -3795 8 890 5187 93 21 68 chr17 40056575 40057463 -55215188 + RLTR13D6 LTR ERVK 1 1036 -78 8 890 288 271 185 8 chr17 40057682 40057812 -55214839 + RSINE1 SINE B4 2 154 -11 9 890 3096 78 19 106 chr17 40057812 40058340 -55214311 + RLTR45 LTR ERVK 1 482 0 9 890 279 0 0 0 chr17 40058367 40058398 -55214253 + (CA)n Simple_repeat Simple_repeat 2 32 0 9 890 26095 66 94 7 chr17 40058480 40062737 -55209914 - L1Md_A LINE L1 -629 5254 631 9 890 14682 170 19 20 chr17 40062716 40063618 -55209033 + L1VL4 LINE L1 1070 1969 -3914 9 890 201 39 0 0 chr17 40063618 40063644 -55209007 + (CAA)n Simple_repeat Simple_repeat 2 27 0 9 890 14682 178 14 15 chr17 40063644 40065532 -55207119 + L1VL4 LINE L1 1970 3861 -2022 9 890 185 0 0 39 chr17 40065532 40065558 -55207093 + (CAAAC)n Simple_repeat Simple_repeat 1 25 0 9 890 14682 178 14 15 chr17 40065558 40065983 -55206668 + L1VL4 LINE L1 3862 4290 -1593 9 890 3068 155 0 0 chr17 40065986 40066482 -55206169 + L1VL4 LINE L1 5129 5624 -259 9 890 3343 58 2 5 chr17 40066548 40066979 -55205672 - L1Md_F2 LINE L1 -12 6570 6141 9 890 861 330 40 63 chr17 40067956 40068383 -55204268 - MTC LTR MaLR -3 418 2 9 890 256 291 11 23 chr17 40068384 40068472 -55204179 - MTC-int LTR MaLR 0 1258 1172 9 890 2868 223 55 25 chr17 40068484 40069243 -55203408 + RLTR22_Mur LTR ERVK 20 801 -1047 9 890 934 214 87 29 chr17 40069540 40069781 -55202870 + RLTR22_Mur LTR ERVK 1590 1844 -4 9 890 870 83 0 0 chr17 40069891 40070011 -55202640 + (TA)n Simple_repeat Simple_repeat 2 121 0 1 890 652 253 26 0 chr17 40070012 40070166 -55202485 + Lx4A LINE L1 6423 6580 -478 1 890 1081 249 88 30 chr17 40070161 40070489 -55202162 + Lx4A LINE L1 6712 7058 0 1 890 2272 312 71 26 chr17 40070516 40072142 -55200509 + Lx5 LINE L1 5500 7102 -358 1 890 1054 95 0 7 chr17 40072181 40072329 -55200322 - B1_Mus2 SINE Alu 0 147 1 1 890 3103 292 21 10 chr17 40072363 40073326 -55199325 - MTC-int LTR MaLR -284 974 2 9 890 649 322 88 28 chr17 40073325 40073609 -55199042 - MTC LTR MaLR 0 421 121 9 890 3437 28 105 0 chr17 40073617 40074047 -55198604 + IAPLTR2_Mm LTR ERVK 1 475 0 1 890 979 261 101 26 chr17 40074585 40074971 -55197680 - MTC LTR MaLR -2 419 5 1 890 225 83 0 0 chr17 40074971 40075007 -55197644 + (A)n Simple_repeat Simple_repeat 1 36 0 1 890 968 293 72 50 chr17 40075022 40075567 -55197084 + Lx7 LINE L1 6936 7492 -204 1 890 358 121 44 0 chr17 40075700 40075791 -55196860 + (CAGA)n Simple_repeat Simple_repeat 2 96 0 1 890 277 272 0 0 chr17 40075802 40075905 -55196746 - L1_Mur1 LINE L1 -3844 2042 1940 1 890 600 338 46 6 chr17 40075914 40076204 -55196447 + Lx6 LINE L1 6967 7206 -254 1 890 637 242 50 0 chr17 40076889 40077050 -55195601 - URR1A DNA MER1_type -2 224 56 1 890 1572 221 5 48 chr17 40077826 40078220 -55194431 - Lx3B LINE L1 -5 6968 6592 1 890 545 316 34 33 chr17 40078260 40078626 -55194025 + Lx7 LINE L1 5495 5863 -1833 1 890 929 169 0 22 chr17 40078706 40078887 -55193764 + Lx2 LINE L1 6810 6986 -11 1 890 592 267 11 0 chr17 40078889 40079065 -55193586 - Lx5 LINE L1 -1286 5764 5587 1 890 1606 280 33 75 chr17 40079089 40079634 -55193017 - RLTR20B3 LTR ERVK -51 526 5 1 890 258 276 23 0 chr17 40079634 40079721 -55192930 - Lx5 LINE L1 -281 5596 5508 1 890 1486 110 0 0 chr17 40079725 40079944 -55192707 - L1_Mus2 LINE L1 0 6566 6348 1 890 384 247 59 41 chr17 40079958 40080051 -55192600 + MTC-int LTR MaLR 1083 1174 -84 1 890 925 162 29 0 chr17 40080051 40080224 -55192427 - Lx LINE L1 -7 6647 6470 1 890 384 247 59 41 chr17 40080224 40080299 -55192352 + MTC-int LTR MaLR 1175 1254 -4 1 890 1007 285 66 14 chr17 40080303 40080669 -55191982 + MTC LTR MaLR 1 385 -36 1 890 3573 69 2 0 chr17 40081073 40081536 -55191115 - L1Md_F2 LINE L1 -2 6580 6117 1 890 1223 264 24 21 chr17 40082162 40082633 -55190018 - Lx3C LINE L1 -1 6996 6486 1 890 245 379 44 48 chr17 40082789 40083041 -55189610 - Lx9 LINE L1 -1052 6592 6342 1 890 206 289 11 32 chr17 40083046 40083139 -55189512 + (CATATA)n Simple_repeat Simple_repeat 6 96 0 1 890 448 312 21 14 chr17 40083684 40083824 -55188827 - B1_Mur4 SINE Alu -7 143 3 1 890 9641 217 23 38 chr17 40084321 40086999 -55185652 + Lx5 LINE L1 3388 6032 -1018 1 890 270 0 0 0 chr17 40086999 40087029 -55185622 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1 890 3808 298 46 13 chr17 40087029 40088003 -55184648 + Lx5 LINE L1 6033 7045 -5 1 890 309 140 0 0 chr17 40088096 40088153 -55184498 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 890 285 98 0 0 chr17 40088458 40088499 -55184152 + (A)n Simple_repeat Simple_repeat 1 41 0 1 890 296 255 0 45 chr17 40089133 40089244 -55183407 + A-rich Low_complexity Low_complexity 6 111 0 1 890 831 86 0 0 chr17 40089408 40089525 -55183126 + (TA)n Simple_repeat Simple_repeat 1 117 0 1 890 498 152 0 0 chr17 40091544 40091636 -55181015 + (TA)n Simple_repeat Simple_repeat 2 93 0 1 890 355 278 0 0 chr17 40092622 40092730 -55179921 - URR1B DNA MER1_type -1 224 117 1 890 222 116 0 0 chr17 40092730 40092773 -55179878 + (T)n Simple_repeat Simple_repeat 1 43 0 1 890 1146 48 7 0 chr17 40092774 40092920 -55179731 - B1_Mus1 SINE Alu 0 148 2 1 890 325 282 44 35 chr17 40093442 40093556 -55179095 + Lx5 LINE L1 6166 6280 -770 1 890 1659 292 32 26 chr17 40093547 40094114 -55178537 + Lx5 LINE L1 6477 7046 -4 1 890 333 68 0 0 chr17 40094541 40094585 -55178066 + (CATA)n Simple_repeat Simple_repeat 2 45 0 1 890 1196 231 46 23 chr17 40094591 40094893 -55177758 - MTC-int LTR MaLR -188 1070 762 1 890 567 258 24 24 chr17 40094863 40095030 -55177621 - MTC-int LTR MaLR -1090 168 2 1 890 960 292 52 77 chr17 40095029 40095433 -55177218 - MTC LTR MaLR 0 421 28 1 890 485 252 25 0 chr17 40096000 40096119 -55176532 - URR1B DNA MER1_type -1 224 103 1 890 405 0 0 0 chr17 40096121 40096166 -55176485 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 890 348 24 0 0 chr17 40096166 40096206 -55176445 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 890 631 296 53 61 chr17 40097001 40097295 -55175356 + L1_Rod LINE L1 5464 5759 -88 1 890 252 0 0 0 chr17 40097295 40097323 -55175328 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 890 631 296 53 61 chr17 40097323 40097406 -55175245 + L1_Rod LINE L1 5760 5838 -9 1 890 315 130 0 0 chr17 40097471 40097525 -55175126 + (T)n Simple_repeat Simple_repeat 1 54 0 1 890 3472 137 29 35 chr17 40097729 40098325 -55174326 - Lx LINE L1 -3 6651 6060 1 890 363 274 67 25 chr17 40098960 40099080 -55173571 + B1_Mus1 SINE Alu 1 125 -23 1 890 309 87 0 21 chr17 40099046 40099093 -55173558 + B1_Mur4 SINE Alu 66 111 -39 1 890 2795 163 117 35 chr17 40099111 40099946 -55172705 - RLTR13D1 LTR ERVK 0 1023 125 1 890 1371 163 29 4 chr17 40099990 40100230 -55172421 - ETnERV3-int LTR ERVK -34 5774 5529 1 890 461 54 0 0 chr17 40100239 40100295 -55172356 - RLTR45-int LTR ERVK -1306 5938 5883 1 890 446 230 1 0 chr17 40100394 40100492 -55172159 - MTC LTR MaLR -27 369 271 1 890 256 78 0 56 chr17 40100545 40100599 -55172052 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 1 890 788 292 8 16 chr17 40100624 40100867 -55171784 - MTC LTR MaLR -97 324 71 1 890 321 26 0 0 chr17 40100884 40100922 -55171729 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 890 2053 326 31 15 chr17 40101572 40102449 -55170202 - Lx7 LINE L1 -903 6793 5903 1 890 495 247 1 62 chr17 40102500 40102631 -55170020 - MTC LTR MaLR -4 415 292 1 890 188 146 0 35 chr17 40102679 40102736 -55169915 + A-rich Low_complexity Low_complexity 6 60 0 1 890 923 273 63 16 chr17 40102762 40103015 -55169636 - MTC LTR MaLR -97 324 60 1 890 468 0 0 0 chr17 40103018 40103070 -55169581 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 890 3610 311 39 19 chr17 40103638 40105196 -55167455 - Lx7 LINE L1 -204 7492 5903 1 890 455 255 0 54 chr17 40105265 40105377 -55167274 - MTC LTR MaLR -20 401 296 1 890 279 0 0 0 chr17 40105428 40105459 -55167192 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 890 787 289 32 25 chr17 40105470 40105779 -55166872 - MTC LTR MaLR -27 380 59 1 890 363 98 0 0 chr17 40105779 40105840 -55166811 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 890 6273 14 0 0 chr17 40106002 40106715 -55165936 + L1Md_T LINE L1 4874 5586 -297 1 890 8239 38 2 0 chr17 40106715 40107707 -55164944 + L1Md_T LINE L1 5587 6580 -2 1 890 24 53 0 0 chr17 40107731 40107769 -55164882 + AT_rich Low_complexity Low_complexity 1 38 0 1 891 3735 307 40 21 chr17 40108264 40109756 -55162895 - Lx7 LINE L1 -274 7422 5903 1 891 476 209 2 14 chr17 40109826 40109942 -55162709 - MTC LTR MaLR -20 401 281 1 891 235 85 43 0 chr17 40109987 40110034 -55162617 + (CAAAA)n Simple_repeat Simple_repeat 1 49 0 1 891 707 280 32 38 chr17 40110063 40110305 -55162346 - MTC LTR MaLR -97 324 71 1 891 3699 297 46 19 chr17 40111022 40111807 -55160844 - Lx7 LINE L1 -334 7362 6535 1 891 2262 75 119 11 chr17 40111807 40112159 -55160492 - RLTR10 LTR ERVK 0 390 1 1 891 3699 297 46 19 chr17 40112159 40112794 -55159857 - Lx7 LINE L1 -1162 6534 5903 1 891 1689 219 69 39 chr17 40112864 40113253 -55159398 - MTC LTR MaLR -20 401 1 1 891 841 249 28 75 chr17 40113267 40113554 -55159097 + ORR1D-int LTR MaLR 1 278 -1092 1 891 269 82 0 20 chr17 40113868 40113918 -55158733 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 1 891 1862 244 76 30 chr17 40114481 40115009 -55157642 - MTC-int LTR MaLR -203 1055 504 1 891 207 0 0 0 chr17 40116288 40116311 -55156340 + (A)n Simple_repeat Simple_repeat 1 23 0 1 891 244 245 252 10 chr17 40116534 40116637 -55156014 - MTC-int LTR MaLR -751 507 380 1 891 3839 89 4 0 chr17 40116643 40117159 -55155492 - L1_Mus1 LINE L1 -1 6566 6049 1 891 432 331 8 0 chr17 40117160 40117290 -55155361 - MTC LTR MaLR 0 421 291 1 891 263 113 19 0 chr17 40117948 40118001 -55154650 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 891 1078 320 47 38 chr17 40118034 40118647 -55154004 + Lx9 LINE L1 6404 7022 -622 1 891 24 32 0 0 chr17 40118765 40118796 -55153855 + AT_rich Low_complexity Low_complexity 1 31 0 1 891 513 80 0 0 chr17 40119326 40119401 -55153250 + (TA)n Simple_repeat Simple_repeat 2 76 0 1 891 7390 164 12 26 chr17 40119401 40120758 -55151893 - Lx2 LINE L1 -1 6996 5659 1 891 4736 167 18 48 chr17 40120854 40121385 -55151266 + Lx3B LINE L1 6106 6632 -341 1 891 4223 95 3 36 chr17 40121385 40122027 -55150624 + L1_Mus1 LINE L1 5947 6567 0 1 891 4736 167 18 48 chr17 40122027 40122388 -55150263 + Lx3B LINE L1 6633 6971 -2 1 891 333 0 0 0 chr17 40122397 40122434 -55150217 + (TAA)n Simple_repeat Simple_repeat 3 39 0 1 891 639 128 0 0 chr17 40122440 40122549 -55150102 + (GGA)n Simple_repeat Simple_repeat 3 111 0 1 891 1300 228 13 41 chr17 40122611 40122926 -55149725 - MTC-int LTR MaLR -449 809 504 1 891 1361 225 95 18 chr17 40123295 40123683 -55148968 - MTC-int LTR MaLR -751 507 122 1 891 1342 252 52 36 chr17 40123693 40124080 -55148571 - MTC LTR MaLR -28 393 1 1 891 279 0 0 0 chr17 40124160 40124191 -55148460 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 891 836 224 17 0 chr17 40124642 40124821 -55147830 - URR1A DNA MER1_type -1 225 44 1 891 484 349 107 11 chr17 40125105 40125731 -55146920 + L1M2 LINE L1 4070 4755 -1388 1 891 2450 214 23 56 chr17 40125875 40126426 -55146225 + Lx2B LINE L1 6379 6924 -76 1 891 1253 97 5 0 chr17 40126426 40126611 -55146040 + L1_Mus1 LINE L1 6380 6565 -2 1 891 2450 214 23 56 chr17 40126611 40126702 -55145949 + Lx2B LINE L1 6925 7000 0 1 891 562 307 94 17 chr17 40126733 40127094 -55145557 + Lx7 LINE L1 4935 5323 -557 1 891 6139 56 8 3 chr17 40127140 40127924 -55144727 + L1Md_F3 LINE L1 5796 6583 -1 1 891 294 302 106 45 chr17 40128051 40128249 -55144402 + Lx8 LINE L1 7215 7424 -49 1 891 681 294 80 36 chr17 40128399 40128847 -55143804 + Lx7 LINE L1 5474 5978 -325 1 891 1847 126 3 66 chr17 40129023 40129328 -55143323 + ORR1A2 LTR MaLR 1 286 -41 1 891 35439 35 0 0 chr17 40129329 40134979 -55137672 + L1Md_T LINE L1 2 5589 -297 1 891 8796 14 0 0 chr17 40134979 40135975 -55136676 + L1Md_T LINE L1 5590 6585 0 1 891 384 55 0 83 chr17 40135977 40136037 -55136614 + ORR1A2 LTR MaLR 272 326 0 1 891 504 291 76 59 chr17 40136114 40136319 -55136332 - Lx7 LINE L1 0 7696 7480 1 891 198 0 0 0 chr17 40136319 40136341 -55136310 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 891 504 291 76 59 chr17 40136341 40136607 -55136044 - Lx7 LINE L1 -217 7479 7217 1 891 419 207 80 9 chr17 40136626 40136738 -55135913 - Lx7 LINE L1 -1725 5971 5852 1 891 1098 205 162 4 chr17 40136800 40137059 -55135592 - Lx5 LINE L1 0 7050 6751 1 891 441 235 35 0 chr17 40137058 40137173 -55135478 - Lx7 LINE L1 -1904 5792 5674 1 891 365 220 18 83 chr17 40137173 40137282 -55135369 + URR1B DNA MER1_type 124 225 0 1 891 2110 123 15 97 chr17 40139954 40140358 -55132293 + L1_Mus3 LINE L1 6262 6632 -6 2 891 1284 73 0 13 chr17 40140717 40140939 -55131712 + (TAGA)n Simple_repeat Simple_repeat 1 219 0 2 891 6439 151 23 2 chr17 40140939 40142706 -55129945 - L1_Mus3 LINE L1 -11 6627 4816 2 891 326 330 0 10 chr17 40142706 40142804 -55129847 + B1_Mur4 SINE Alu 53 149 -1 2 891 234 184 109 109 chr17 40143197 40143307 -55129344 + RMER19A LTR ERVK 14 123 -614 2 891 657 305 31 37 chr17 40143435 40143789 -55128862 + Lx9 LINE L1 6793 7144 -500 2 891 486 216 73 18 chr17 40144546 40144711 -55127940 - MTB_Mm-int LTR MaLR -1081 177 4 2 891 391 333 7 22 chr17 40144712 40144850 -55127801 - MTB_Mm LTR MaLR 0 407 272 2 891 460 240 82 7 chr17 40145371 40145518 -55127133 - URR1A DNA MER1_type -1 225 68 2 891 272 308 78 6 chr17 40145787 40145969 -55126682 + Lx7 LINE L1 4026 4249 -1894 2 891 804 294 32 32 chr17 40146240 40146602 -55126049 + Lx7 LINE L1 5501 5895 -1801 2 891 400 299 35 18 chr17 40146937 40147107 -55125544 - Lx7 LINE L1 -1674 6022 5850 2 891 1607 235 16 32 chr17 40147118 40147545 -55125106 - MTB_Mm LTR MaLR 0 419 1 2 891 409 242 10 10 chr17 40147570 40147670 -55124981 + ORR1B1-int LTR MaLR 11 110 -1399 2 891 180 97 0 0 chr17 40147735 40147766 -55124885 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2 891 249 33 0 0 chr17 40148345 40148375 -55124276 + (T)n Simple_repeat Simple_repeat 1 30 0 2 891 4604 103 85 68 chr17 40148767 40149557 -55123094 - RLTR13B4 LTR ERVK 0 803 1 2 891 409 307 88 0 chr17 40150109 40150246 -55122405 - MTC LTR MaLR -225 196 48 2 891 27622 133 20 16 chr17 40150249 40156284 -55116367 - L1_Mus1 LINE L1 0 6567 510 2 891 2895 200 34 81 chr17 40156296 40157119 -55115532 + RMER17D2 LTR ERVK 26 809 0 2 891 2490 259 60 8 chr17 40157311 40158027 -55114624 - Lx7 LINE L1 -594 7102 6350 2 891 608 294 129 37 chr17 40158090 40158465 -55114186 - RMER12 LTR ERVK -198 1374 933 2 891 206 156 22 0 chr17 40158491 40158536 -55114115 + A-rich Low_complexity Low_complexity 3 48 0 2 891 313 252 15 82 chr17 40158537 40158671 -55113980 - RLTR22_Mur LTR ERVK -567 1281 1157 2 891 522 269 27 135 chr17 40158686 40158857 -55113794 - RLTR22_Mur LTR ERVK -997 811 650 2 891 756 153 80 0 chr17 40158857 40158994 -55113657 + B1_Mus1 SINE Alu 1 148 0 2 891 522 265 24 117 chr17 40158994 40159190 -55113461 - RLTR22_Mur LTR ERVK -1199 649 484 2 891 493 281 126 0 chr17 40159232 40159399 -55113252 - RMER12 LTR ERVK -1131 191 4 2 891 4893 172 8 62 chr17 40160783 40161726 -55110925 - Lx2 LINE L1 -9 6988 6096 2 891 2195 119 39 26 chr17 40161726 40161871 -55110780 + Lx2 LINE L1 5634 5784 -1213 2 891 220 27 54 0 chr17 40161871 40161908 -55110743 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2 891 2195 119 39 26 chr17 40161908 40161998 -55110653 + Lx2 LINE L1 5785 5870 -1127 2 891 207 69 0 0 chr17 40161998 40162027 -55110624 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2 891 2195 119 39 26 chr17 40162027 40162178 -55110473 + Lx2 LINE L1 5871 6026 -971 2 891 1571 159 0 11 chr17 40162189 40162468 -55110183 + Lx2 LINE L1 6373 6648 -6 2 891 807 282 14 5 chr17 40163752 40163959 -55108692 - B3 SINE B2 -7 209 1 2 891 6484 23 0 2 chr17 40164036 40164824 -55107827 - MT-int LTR MaLR -77 1021 236 2 891 24 32 0 0 chr17 40165047 40165078 -55107573 + AT_rich Low_complexity Low_complexity 1 31 0 2 891 7462 53 1 0 chr17 40165323 40166259 -55106392 - L1Md_A LINE L1 -2 6580 5674 2 891 192 158 0 0 chr17 40166994 40167032 -55105619 + T-rich Low_complexity Low_complexity 2 39 0 2 891 4940 154 61 43 chr17 40167326 40168258 -55104393 + Lx2 LINE L1 5887 6835 -162 2 891 27592 109 17 30 chr17 40168425 40173512 -55099139 + L1Md_F2 LINE L1 561 5585 -298 2 891 7064 83 4 22 chr17 40173513 40174511 -55098140 + L1Md_F2 LINE L1 5587 6566 -16 2 891 341 274 28 9 chr17 40176425 40176532 -55096119 + Lx7 LINE L1 6356 6464 -1232 2 891 1174 311 57 31 chr17 40176568 40177178 -55095473 + Lx7 LINE L1 6795 7420 -276 2 891 634 213 25 30 chr17 40177158 40177361 -55095290 - L1_Mur2 LINE L1 -4432 1445 1244 2 891 498 136 0 0 chr17 40177361 40177442 -55095209 + (TTTA)n Simple_repeat Simple_repeat 1 81 0 2 891 1109 89 0 0 chr17 40177442 40177588 -55095063 - B1_Mm SINE Alu -1 146 1 2 891 1403 218 32 8 chr17 40177588 40177958 -55094693 - L1_Mur2 LINE L1 -5818 1268 890 2 891 822 299 44 14 chr17 40177974 40178335 -55094316 - L1_Mur2 LINE L1 -6292 794 375 2 891 317 296 100 46 chr17 40178526 40178887 -55093764 - Lx8 LINE L1 -13 5867 5523 2 891 1772 209 21 24 chr17 40178925 40179308 -55093343 + Lx3C LINE L1 6593 6974 -2 2 891 22 0 0 0 chr17 40179309 40179331 -55093320 + AT_rich Low_complexity Low_complexity 1 22 0 2 891 268 288 90 33 chr17 40180428 40180550 -55092101 + MTC LTR MaLR 289 417 -4 2 891 228 417 0 21 chr17 40180608 40180799 -55091852 - Lx6 LINE L1 -295 7165 6979 2 891 287 311 0 0 chr17 40180839 40180945 -55091706 + L1_Mur1 LINE L1 1946 2051 -3835 2 891 236 131 0 21 chr17 40180945 40180992 -55091659 + CT-rich Low_complexity Low_complexity 1 46 0 2 891 4335 205 18 36 chr17 40181046 40181460 -55091191 + L1_Mur1 LINE L1 2078 2461 -3425 2 891 201 39 0 0 chr17 40181460 40181486 -55091165 + (CAA)n Simple_repeat Simple_repeat 1 26 0 2 891 4335 205 18 36 chr17 40181486 40182124 -55090527 + L1_Mur1 LINE L1 2462 3111 -2775 2 891 347 398 41 25 chr17 40182460 40182854 -55089797 - Lx9 LINE L1 -780 6864 6465 2 891 324 0 0 0 chr17 40182968 40183004 -55089647 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 891 2601 88 3 22 chr17 40183691 40184061 -55088590 - L1Md_F2 LINE L1 -14 6568 6206 2 891 1644 83 16 8 chr17 40184061 40184304 -55088347 + L1_Mm LINE L1 5190 5434 -449 2 891 34 42 0 0 chr17 40184636 40184684 -55087967 + AT_rich Low_complexity Low_complexity 1 48 0 2 891 237 132 0 0 chr17 40184877 40184915 -55087736 + (TTTTC)n Simple_repeat Simple_repeat 2 39 0 2 891 2791 194 39 10 chr17 40184927 40185522 -55087129 + Lx3A LINE L1 6362 6973 -8 2 891 236 189 0 0 chr17 40185522 40185575 -55087076 + (TAAA)n Simple_repeat Simple_repeat 1 53 0 2 891 4636 159 11 41 chr17 40185659 40187293 -55085358 + L1VL2 LINE L1 94 1670 -1945 2 891 467 296 47 11 chr17 40187297 40187609 -55085042 + Lx7 LINE L1 5522 5811 -1885 2 891 339 285 55 71 chr17 40187932 40188245 -55084406 + L1_Mur1 LINE L1 449 765 -6219 2 891 603 306 20 0 chr17 40188440 40188636 -55084015 + L1_Mur1 LINE L1 700 899 -6085 2 891 1914 182 51 17 chr17 40189164 40189843 -55082808 + L1_Mur1 LINE L1 904 1603 -4283 2 891 213 39 0 0 chr17 40189843 40189869 -55082782 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 2 891 1492 188 5 35 chr17 40189869 40189895 -55082756 + L1_Mur1 LINE L1 1604 1627 -4259 2 891 5556 212 69 58 chr17 40189881 40193909 -55078742 + L1_Mus3 LINE L1 1 6496 -142 2 891 360 0 0 0 chr17 40194582 40194622 -55078029 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 891 2576 265 73 11 chr17 40195310 40196064 -55076587 + MTC-int LTR MaLR 260 1060 -198 2 891 3669 240 40 68 chr17 40196264 40197601 -55075050 - L1_Mur2 LINE L1 -1541 4336 3038 2 891 6455 94 21 3 chr17 40197609 40198512 -55074139 - L1Md_F2 LINE L1 -13 6569 5651 2 891 2614 233 58 18 chr17 40198513 40199344 -55073307 - L1_Mur2 LINE L1 -2815 3062 2199 2 891 375 105 0 0 chr17 40199350 40199407 -55073244 + (TTTC)n Simple_repeat Simple_repeat 3 59 0 2 891 295 185 97 11 chr17 40199410 40199503 -55073148 - Lx2 LINE L1 0 6997 6897 2 891 451 255 28 151 chr17 40199496 40199652 -55072999 - L1_Mur2 LINE L1 -3671 2206 2065 2 891 554 28 14 0 chr17 40199652 40199724 -55072927 + (TC)n Simple_repeat Simple_repeat 2 74 0 2 891 451 255 28 151 chr17 40199724 40199959 -55072692 - L1_Mur2 LINE L1 -3813 2064 1863 2 891 281 257 0 0 chr17 40199943 40200013 -55072638 + Lx3A LINE L1 6900 6969 -12 2 891 202 189 0 0 chr17 40200024 40200061 -55072590 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 2 891 503 375 44 9 chr17 40200095 40200321 -55072330 + B4A SINE B4 1 234 -58 2 891 448 327 9 0 chr17 40200877 40201097 -55071554 + URR1A DNA MER1_type 5 226 0 2 891 3495 57 31 0 chr17 40201149 40201607 -55071044 - L1Md_F3 LINE L1 -15 6569 6098 2 891 222 105 0 0 chr17 40202197 40202235 -55070416 + (GAAA)n Simple_repeat Simple_repeat 3 40 0 2 891 22 35 0 0 chr17 40203044 40203073 -55069578 + AT_rich Low_complexity Low_complexity 1 29 0 2 891 22 35 0 0 chr17 40203284 40203313 -55069338 + AT_rich Low_complexity Low_complexity 1 29 0 2 891 5163 70 136 6 chr17 40203661 40204376 -55068275 + RLTR13C2 LTR ERVK 1 808 0 2 891 3411 231 42 14 chr17 40205023 40205249 -55067402 - L1_Mur2 LINE L1 -2897 2980 2740 2 891 222 37 0 0 chr17 40205249 40205276 -55067375 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 891 3411 231 42 14 chr17 40205276 40205800 -55066851 - L1_Mur2 LINE L1 -3138 2739 2201 2 891 687 57 0 0 chr17 40205800 40205888 -55066763 + (CTTTG)n Simple_repeat Simple_repeat 2 89 0 2 891 3411 231 42 14 chr17 40205888 40206039 -55066612 - L1_Mur2 LINE L1 -3677 2200 2056 2 891 369 75 0 0 chr17 40206039 40206092 -55066559 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 891 3411 231 42 14 chr17 40206092 40206218 -55066433 - L1_Mur2 LINE L1 -3822 2055 1924 2 891 1037 310 40 23 chr17 40207142 40207538 -55065113 - MTC LTR MaLR -3 418 16 2 891 2802 216 52 70 chr17 40207653 40208448 -55064203 + RLTR22_Mur LTR ERVK 22 801 -1047 2 891 922 228 83 30 chr17 40208707 40208983 -55063668 + RLTR22_Mur LTR ERVK 1508 1843 -5 2 891 21 0 0 0 chr17 40209067 40209088 -55063563 + AT_rich Low_complexity Low_complexity 1 21 0 2 891 687 234 21 0 chr17 40209096 40209241 -55063410 + Lx4A LINE L1 6433 6580 -478 2 891 1110 257 85 22 chr17 40209236 40209554 -55063097 + Lx4A LINE L1 6712 7049 -9 2 891 2183 312 48 34 chr17 40209587 40211210 -55061441 + Lx5 LINE L1 5500 7046 -4 2 891 3043 303 21 12 chr17 40211221 40212250 -55060401 - MTC-int LTR MaLR -284 974 2 2 891 649 303 102 20 chr17 40212249 40212495 -55060156 - MTC LTR MaLR 0 421 156 2 891 1116 261 109 21 chr17 40213077 40213453 -55059198 - MTC LTR MaLR -8 413 5 2 891 306 98 0 0 chr17 40213475 40213526 -55059125 + (A)n Simple_repeat Simple_repeat 1 51 0 2 891 722 299 96 23 chr17 40213541 40213938 -55058713 + Lx7 LINE L1 6936 7361 -335 2 891 528 145 0 0 chr17 40214191 40214308 -55058343 + (CAGAGA)n Simple_repeat Simple_repeat 2 118 0 2 891 480 18 0 0 chr17 40214345 40214402 -55058249 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 891 32548 74 29 0 chr17 40214446 40220487 -55052164 - L1Md_F2 LINE L1 -1 6581 358 2 891 336 230 0 0 chr17 40220492 40220566 -55052085 - L1_Mur2 LINE L1 -3863 2014 1941 2 891 481 348 79 14 chr17 40220575 40220855 -55051796 + Lx5 LINE L1 6571 6868 -182 2 891 637 242 50 0 chr17 40221525 40221686 -55050965 - URR1A DNA MER1_type -2 224 56 2 891 1642 212 16 34 chr17 40222467 40222848 -55049803 - Lx3B LINE L1 -4 6969 6596 2 891 392 319 43 45 chr17 40222888 40223240 -55049411 + Lx7 LINE L1 5463 5845 -1851 2 891 696 201 58 82 chr17 40223321 40223527 -55049124 + Lx LINE L1 6448 6648 -6 2 891 534 288 33 0 chr17 40223520 40223704 -55048947 - Lx4B LINE L1 -1282 5776 5587 2 891 1732 263 36 69 chr17 40223723 40224274 -55048377 - RLTR20B3 LTR ERVK -44 533 1 2 891 1537 101 0 0 chr17 40224363 40224581 -55048070 - L1_Mus2 LINE L1 -1 6565 6348 2 891 747 237 29 0 chr17 40224691 40224864 -55047787 - Lx LINE L1 -7 6647 6470 3 891 225 217 33 0 chr17 40224888 40224948 -55047703 + MTC-int LTR MaLR 1193 1254 -4 3 891 956 306 67 14 chr17 40224957 40225318 -55047333 + MTC LTR MaLR 6 385 -36 3 891 1364 264 45 11 chr17 40226162 40226618 -55046033 - Lx2B LINE L1 -8 7050 6486 3 891 266 0 29 0 chr17 40226740 40226774 -55045877 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 891 294 115 0 0 chr17 40227074 40227126 -55045525 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 891 534 246 8 8 chr17 40227729 40227848 -55044803 - B1_Mur4 SINE Alu -7 143 25 3 891 21 71 0 0 chr17 40228305 40228347 -55044304 + AT_rich Low_complexity Low_complexity 1 42 0 3 891 9681 210 39 22 chr17 40228368 40228623 -55044028 + Lx5 LINE L1 3388 3644 -2233 3 891 189 0 0 0 chr17 40228623 40228644 -55044007 + (CAA)n Simple_repeat Simple_repeat 1 21 0 3 891 9681 210 39 22 chr17 40228644 40230069 -55042582 + Lx5 LINE L1 3645 5068 -809 3 891 342 0 0 0 chr17 40230069 40230107 -55042544 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 891 9681 262 40 22 chr17 40230107 40232018 -55040633 + Lx5 LINE L1 5069 7049 -1 3 891 214 154 0 71 chr17 40233124 40233180 -55039471 + A-rich Low_complexity Low_complexity 5 56 0 3 891 214 50 24 24 chr17 40233197 40233238 -55039413 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 3 891 921 100 15 0 chr17 40234436 40234566 -55038085 + B1_Mm SINE Alu 2 133 -14 3 891 499 246 149 30 chr17 40236576 40236777 -55035874 - URR1A DNA MER1_type -1 225 1 3 891 285 206 15 45 chr17 40237291 40237357 -55035294 + Lx5 LINE L1 6221 6284 -766 3 891 997 312 95 34 chr17 40237342 40237879 -55034772 + Lx5 LINE L1 6477 7046 -4 3 891 359 344 75 36 chr17 40237959 40238291 -55034360 + Lx6 LINE L1 7050 7394 -66 3 891 225 94 0 0 chr17 40238329 40238361 -55034290 + (CATA)n Simple_repeat Simple_repeat 2 33 0 3 111 584 244 89 0 chr17 40239079 40239247 -55033404 - URR1A DNA MER1_type -7 219 37 3 892 668 237 73 26 chr17 40239841 40240032 -55032619 + MTC LTR MaLR 214 413 -8 3 892 556 302 111 28 chr17 40240605 40240857 -55031794 + MTB_Mm LTR MaLR 135 407 0 3 892 2966 299 22 28 chr17 40240856 40241897 -55030754 + MTB_Mm-int LTR MaLR 2 971 -287 3 892 216 0 0 0 chr17 40241897 40241921 -55030730 + (CATTT)n Simple_repeat Simple_repeat 2 25 0 3 892 180 0 0 0 chr17 40241918 40241938 -55030713 + (CTTTA)n Simple_repeat Simple_repeat 2 21 0 3 892 2275 304 37 27 chr17 40241938 40243576 -55029075 - Lx5 LINE L1 0 7050 5500 3 892 1074 247 82 30 chr17 40243603 40243933 -55028718 - Lx4A LINE L1 0 7058 6712 3 892 640 262 21 0 chr17 40243928 40244073 -55028578 - Lx4A LINE L1 -478 6580 6433 3 892 22 0 0 0 chr17 40244164 40244186 -55028465 + AT_rich Low_complexity Low_complexity 1 22 0 3 892 993 217 80 17 chr17 40244194 40244433 -55028218 - RLTR22_Mur LTR ERVK -5 1843 1590 3 892 2951 196 98 36 chr17 40244731 40245483 -55027168 - RLTR22_Mur LTR ERVK -1047 801 3 3 892 243 286 13 13 chr17 40245485 40245563 -55027088 + MTB_Mm-int LTR MaLR 1172 1249 -9 3 892 1275 193 34 52 chr17 40245609 40245937 -55026714 - RLTRETN_Mm LTR ERVK 0 322 1 3 892 449 80 37 74 chr17 40245939 40246020 -55026631 - ETnERV2-int LTR ERVK -3 7403 7326 3 892 346 271 272 11 chr17 40246021 40246308 -55026343 - RLTR13D6 LTR ERVK -370 532 171 3 892 8198 228 91 89 chr17 40246308 40249196 -55023455 - MMETn-int LTR ERVK -337 4507 1641 3 892 197 33 33 0 chr17 40249196 40249226 -55023425 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 892 8198 228 91 89 chr17 40249226 40250564 -55022087 - MMETn-int LTR ERVK -3204 1640 273 3 892 392 321 7 35 chr17 40250585 40250730 -55021921 + MTB_Mm LTR MaLR 281 421 0 3 892 4609 152 26 13 chr17 40250740 40251584 -55021067 - RLTR13A LTR ERVK 0 855 1 3 892 2565 228 34 57 chr17 40255379 40255521 -55017130 + L1_Mur2 LINE L1 1922 2060 -3817 3 892 285 100 0 0 chr17 40255521 40255571 -55017080 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 892 2565 228 34 57 chr17 40255571 40256265 -55016386 + L1_Mur2 LINE L1 2061 2738 -3139 3 892 183 80 0 0 chr17 40256269 40256294 -55016357 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 892 234 179 0 0 chr17 40256627 40256683 -55015968 + T-rich Low_complexity Low_complexity 1 56 0 3 892 4595 103 11 0 chr17 40256689 40257350 -55015301 - L1_Mus1 LINE L1 0 6567 5900 3 892 41209 5 0 0 chr17 40257494 40264058 -55008593 - L1Md_A LINE L1 -1 6581 18 3 892 25 51 0 0 chr17 40264583 40264622 -55008029 + AT_rich Low_complexity Low_complexity 1 39 0 3 892 1031 81 7 0 chr17 40265424 40265560 -55007091 + B1_Mus2 SINE Alu 1 137 -10 3 892 24 0 0 0 chr17 40265602 40265626 -55007025 + AT_rich Low_complexity Low_complexity 1 24 0 3 892 225 312 0 70 chr17 40266289 40266375 -55006276 + MER3 DNA MER1_type 23 102 -107 3 892 513 0 0 0 chr17 40266652 40266709 -55005942 + (TAAA)n Simple_repeat Simple_repeat 3 59 0 3 892 2025 129 3 3 chr17 40266709 40267020 -55005631 - L1_Mus4 LINE L1 -261 6375 6065 3 892 191 146 24 0 chr17 40267029 40267070 -55005581 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 3 892 3349 152 9 11 chr17 40267113 40267685 -55004966 - L1_Mus4 LINE L1 -1 6635 6065 3 892 318 26 0 0 chr17 40268280 40268319 -55004332 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 892 437 340 32 9 chr17 40268955 40269172 -55003479 - URR1A DNA MER1_type 0 226 5 3 892 257 286 0 0 chr17 40270034 40270104 -55002547 - Lx3A LINE L1 -12 6969 6900 3 892 7153 242 39 53 chr17 40270081 40270303 -55002348 + L1_Mur2 LINE L1 1856 2070 -3807 3 892 303 104 0 0 chr17 40270303 40270351 -55002300 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 892 7153 242 39 53 chr17 40270351 40270532 -55002119 + L1_Mur2 LINE L1 2071 2203 -3674 3 892 603 40 0 0 chr17 40270532 40270606 -55002045 + (GAAA)n Simple_repeat Simple_repeat 1 74 0 3 892 7153 242 39 53 chr17 40270606 40271449 -55001202 + L1_Mur2 LINE L1 2204 3062 -2815 3 892 6498 83 26 3 chr17 40271449 40272348 -55000303 + L1Md_F2 LINE L1 5651 6569 -13 3 892 7153 242 39 53 chr17 40272348 40273616 -54999035 + L1_Mur2 LINE L1 3063 4338 -1539 3 892 1765 273 51 32 chr17 40273780 40274333 -54998318 - MTC-int LTR MaLR -174 1084 522 3 892 198 0 0 0 chr17 40274959 40274981 -54997670 + (TA)n Simple_repeat Simple_repeat 2 23 0 3 892 233 289 92 20 chr17 40275284 40275436 -54997215 + L1_Mur3 LINE L1 4027 4189 -1691 3 892 6211 137 21 0 chr17 40275647 40277054 -54995597 - L1_Mus3 LINE L1 -142 6496 5054 3 892 4801 106 6 14 chr17 40277055 40277776 -54994875 - L1Md_F2 LINE L1 0 6582 5868 3 892 12795 133 11 9 chr17 40277776 40278014 -54994637 - L1_Mus3 LINE L1 -2357 3526 3283 3 892 1881 96 31 22 chr17 40278014 40278333 -54994318 + RLTRETN_Mm LTR ERVK 1 322 0 3 892 12795 143 20 26 chr17 40278333 40281130 -54991521 - L1_Mus3 LINE L1 -2601 3282 510 3 892 2142 154 14 65 chr17 40281142 40281697 -54990954 + RMER17D LTR ERVK 26 525 -364 3 892 2208 168 5 5 chr17 40281699 40282094 -54990557 - Lx2 LINE L1 -507 6490 6096 3 892 2050 127 50 3 chr17 40282091 40282319 -54990332 + Lx2 LINE L1 5631 5871 -1126 3 892 268 24 0 47 chr17 40282319 40282362 -54990289 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 3 892 2050 127 50 3 chr17 40282362 40282511 -54990140 + Lx2 LINE L1 5872 6025 -972 3 892 1463 165 7 29 chr17 40282522 40282803 -54989848 + Lx2 LINE L1 6373 6647 -7 3 892 787 304 10 0 chr17 40284097 40284304 -54988347 - B3 SINE B2 -7 209 1 3 892 24 32 0 0 chr17 40284607 40284638 -54988013 + AT_rich Low_complexity Low_complexity 1 31 0 3 892 226 67 0 0 chr17 40285084 40285114 -54987537 + L1Md_F2 LINE L1 5556 5585 -298 3 892 7157 81 12 9 chr17 40285115 40286098 -54986553 + L1Md_F2 LINE L1 5587 6572 -10 3 892 24 0 0 0 chr17 40286642 40286666 -54985985 + AT_rich Low_complexity Low_complexity 1 24 0 3 892 6697 142 27 1 chr17 40286952 40288034 -54984617 + Lx2 LINE L1 5887 6996 -1 3 892 4379 115 23 1 chr17 40288205 40289438 -54983213 + L1VL4 LINE L1 206 1471 -2088 3 892 269 125 0 40 chr17 40289909 40289959 -54982692 - MYSERV6-int LTR ERVK -3394 5565 5518 3 892 13806 88 2 1 chr17 40290867 40292877 -54979774 - L1_Mm LINE L1 -1114 4769 2756 3 892 1358 43 32 5 chr17 40294075 40294261 -54978390 + L1Md_F3 LINE L1 6393 6583 -1 3 892 3870 79 41 27 chr17 40294260 40294819 -54977832 + L1Md_F2 LINE L1 6005 6571 -11 3 892 402 21 0 0 chr17 40295035 40295082 -54977569 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 892 338 0 24 0 chr17 40295335 40295377 -54977274 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 3 892 374 221 47 19 chr17 40295631 40295737 -54976914 + Lx7 LINE L1 6356 6464 -1232 3 892 1132 301 32 41 chr17 40295766 40296330 -54976321 + Lx7 LINE L1 6795 7353 -343 3 892 3542 95 20 2 chr17 40296331 40296836 -54975815 + L1_Mus1 LINE L1 6054 6567 0 3 892 497 218 27 32 chr17 40296908 40297093 -54975558 - L1_Mur2 LINE L1 -4432 1445 1262 3 892 25 31 0 0 chr17 40297093 40297125 -54975526 + AT_rich Low_complexity Low_complexity 1 32 0 3 892 2124 50 0 0 chr17 40297132 40297392 -54975259 - L1Md_A LINE L1 -1 6581 6322 3 892 1021 103 7 20 chr17 40297428 40297576 -54975075 - B1_Mm SINE Alu -1 146 1 3 892 707 169 11 11 chr17 40297576 40297761 -54974890 - L1_Mur2 LINE L1 -5818 1268 1084 3 892 37274 31 1 6 chr17 40297752 40303934 -54968717 - L1Md_A LINE L1 0 6582 440 3 892 835 234 14 5 chr17 40303934 40304149 -54968502 - L1_Mur2 LINE L1 -5980 1106 890 3 892 661 291 108 4 chr17 40304162 40304504 -54968147 - L1_Mur2 LINE L1 -6292 794 375 3 892 375 294 74 13 chr17 40304720 40304951 -54967700 - Lx7 LINE L1 -1853 5843 5599 3 892 1975 179 16 24 chr17 40305091 40305474 -54967177 + Lx3B LINE L1 6592 6971 -2 3 892 21 0 0 0 chr17 40305482 40305503 -54967148 + AT_rich Low_complexity Low_complexity 1 21 0 3 892 630 198 188 26 chr17 40306237 40306429 -54966222 + URR1A DNA MER1_type 2 224 -2 3 892 294 234 0 94 chr17 40306978 40307063 -54965588 + MTB_Mm LTR MaLR 274 350 -57 3 892 298 365 54 23 chr17 40307095 40307370 -54965281 - Lx5 LINE L1 -225 6825 6571 3 892 409 267 45 6 chr17 40307398 40307457 -54965194 + L1_Mur2 LINE L1 1961 2021 -3856 3 892 914 42 8 0 chr17 40307457 40307576 -54965075 + (TC)n Simple_repeat Simple_repeat 1 120 0 3 892 216 0 0 0 chr17 40307576 40307599 -54965052 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 892 409 267 45 6 chr17 40307599 40307715 -54964936 + L1_Mur2 LINE L1 2022 2142 -3735 3 892 2545 10 0 0 chr17 40307720 40308019 -54964632 + L1Md_A LINE L1 5288 5586 -297 3 892 9037 3 0 0 chr17 40308019 40309015 -54963636 + L1Md_A LINE L1 5587 6582 0 3 892 3810 199 19 48 chr17 40309026 40310018 -54962633 + MusHAL1 LINE L1 942 1904 -808 3 892 4526 55 0 0 chr17 40310311 40310870 -54961781 + L1Md_F2 LINE L1 6012 6570 -12 3 892 306 0 0 0 chr17 40311436 40311470 -54961181 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 892 259 258 0 0 chr17 40311479 40311545 -54961106 + (TA)n Simple_repeat Simple_repeat 1 66 0 3 892 30 69 0 0 chr17 40312464 40312522 -54960129 + AT_rich Low_complexity Low_complexity 1 58 0 3 892 827 60 17 0 chr17 40312683 40312800 -54959851 + (TTTC)n Simple_repeat Simple_repeat 2 120 0 3 892 253 348 76 0 chr17 40312841 40312933 -54959718 - B1_Mur4 SINE Alu -7 143 45 3 892 248 0 31 0 chr17 40313301 40313333 -54959318 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 892 3393 168 18 8 chr17 40313355 40313966 -54958685 + Lx3A LINE L1 6357 6973 -8 3 892 211 136 68 0 chr17 40313970 40314014 -54958637 + (TAAA)n Simple_repeat Simple_repeat 1 47 0 4 892 4491 141 28 58 chr17 40314103 40315366 -54957285 + L1VL2 LINE L1 94 1317 -2298 4 892 3797 61 95 10 chr17 40315368 40315884 -54956767 + LTRIS2 LTR ERV1 5 564 0 4 892 691 83 0 2 chr17 40316095 40316204 -54956447 + RLTR1B-int LTR ERV1 139 293 -3006 4 892 731 165 74 74 chr17 40316551 40316741 -54955910 + RMER16-int LTR ERVK 142 331 -5075 4 892 4299 139 24 20 chr17 40316727 40317481 -54955170 + RMER16-int LTR ERVK 690 1446 -3960 4 892 8736 129 80 52 chr17 40317472 40319744 -54952907 + RLTR1B-int LTR ERV1 761 2555 -744 4 892 1051 206 63 20 chr17 40319731 40320114 -54952537 + RLTR1B-int LTR ERV1 2669 2813 -486 4 892 837 216 40 13 chr17 40320237 40320462 -54952189 + RLTR1B-int LTR ERV1 4791 5021 -42 4 892 3823 57 95 10 chr17 40320465 40320981 -54951670 + LTRIS2 LTR ERV1 5 564 0 4 892 1815 137 41 3 chr17 40320981 40321325 -54951326 + MusHAL1 LINE L1 411 767 -1945 4 892 398 316 38 9 chr17 40321326 40321686 -54950965 + Lx7 LINE L1 5519 5856 -1840 4 892 306 224 0 0 chr17 40321966 40322051 -54950600 + L1_Mur1 LINE L1 688 754 -6228 4 892 289 203 0 0 chr17 40322212 40322276 -54950375 + L1_Mur1 LINE L1 688 751 -6231 4 892 261 282 0 0 chr17 40322401 40322472 -54950179 + L1_Mur1 LINE L1 681 751 -6233 4 892 2128 219 114 17 chr17 40322473 40323727 -54948924 + L1_Mur1 LINE L1 702 2091 -3795 4 892 5227 95 19 88 chr17 40323727 40324632 -54948019 + RLTR13D6 LTR ERVK 1 842 -60 4 892 269 245 127 139 chr17 40324841 40325007 -54947644 + RSINE1 SINE B4 2 165 0 4 892 423 98 0 0 chr17 40325122 40325183 -54947468 + (GA)n Simple_repeat Simple_repeat 1 61 0 4 892 3513 208 28 14 chr17 40325183 40326059 -54946592 + Lx3C LINE L1 5725 6612 -364 4 892 1959 179 48 17 chr17 40326101 40326516 -54946135 + Lx LINE L1 746 1173 -5484 4 892 4086 92 21 2 chr17 40326549 40327124 -54945527 - L1Md_F3 LINE L1 -16 6568 5983 4 892 1682 76 0 0 chr17 40327125 40327363 -54945288 - L1_Mm LINE L1 -819 5064 4827 4 892 31504 65 1 6 chr17 40327364 40332263 -54940388 - L1Md_F3 LINE L1 -381 5502 631 4 892 14132 179 18 19 chr17 40332259 40335464 -54937187 + Lx LINE L1 1087 4290 -1593 4 892 4504 139 5 0 chr17 40335461 40336514 -54936137 + Lx LINE L1 5123 6178 -476 4 892 1115 162 0 11 chr17 40336515 40336702 -54935949 - RLTR21 LTR ERVK -82 1490 1306 4 892 405 0 0 0 chr17 40336702 40336747 -54935904 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 892 423 363 102 26 chr17 40337479 40337782 -54934869 + L1MCa LINE L1 77 402 -6106 4 892 24 0 0 0 chr17 40337811 40337835 -54934816 + AT_rich Low_complexity Low_complexity 1 24 0 4 892 5129 97 22 1 chr17 40337882 40338612 -54934039 - L1_Mus1 LINE L1 0 6567 5823 4 892 2216 65 0 0 chr17 40338618 40338908 -54933743 + L1Md_F2 LINE L1 5679 5968 -614 4 892 462 48 0 16 chr17 40338906 40338969 -54933682 - L1Md_F2 LINE L1 -285 6297 6236 4 892 2380 113 3 0 chr17 40338965 40339319 -54933332 + L1_Mm LINE L1 5006 5360 -523 4 892 202 164 0 68 chr17 40339327 40339372 -54933279 + CT-rich Low_complexity Low_complexity 15 56 0 4 892 1074 102 0 0 chr17 40339372 40339519 -54933132 - B1_Mm SINE Alu 0 147 1 4 892 202 164 0 68 chr17 40339519 40339532 -54933119 + polypyrimidine Low_complexity Low_complexity 2 14 0 4 892 1162 68 0 0 chr17 40340820 40340967 -54931684 + B1_Mm SINE Alu 1 147 0 4 892 316 276 112 52 chr17 40341166 40341188 -54931463 + B1F SINE Alu 2 143 -6 4 892 443 248 71 27 chr17 40341188 40341300 -54931351 + ID_B1 SINE B4 102 218 -6 4 892 738 174 21 28 chr17 40341519 40341661 -54930990 + B1_Mur2 SINE Alu 2 142 -7 4 892 198 0 0 0 chr17 40342022 40342044 -54930607 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 4 892 430 235 77 19 chr17 40342048 40342152 -54930499 - B1F SINE Alu -12 137 28 4 892 672 222 120 22 chr17 40342226 40342410 -54930241 + B3 SINE B2 1 202 -14 4 892 511 252 17 9 chr17 40342530 40342646 -54930005 + PB1D10 SINE Alu 1 117 0 4 892 2084 97 0 16 chr17 40343332 40343647 -54929004 - L1Md_F2 LINE L1 0 6582 6273 4 892 624 27 0 0 chr17 40346136 40346210 -54926441 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 4 892 21 36 0 0 chr17 40346341 40346369 -54926282 + AT_rich Low_complexity Low_complexity 1 28 0 4 892 1191 297 81 31 chr17 40346453 40347359 -54925292 - L1_Rod LINE L1 -1169 4678 3728 4 892 47 19 0 0 chr17 40347425 40347479 -54925172 + AT_rich Low_complexity Low_complexity 1 54 0 4 892 227 85 16 63 chr17 40347538 40347601 -54925050 + (TTATA)n Simple_repeat Simple_repeat 5 64 0 4 892 255 206 27 45 chr17 40347659 40347771 -54924880 + (TTATA)n Simple_repeat Simple_repeat 1 110 0 4 892 370 276 96 57 chr17 40347771 40347948 -54924703 - HAL1-3A_ME LINE L1 -390 2468 2285 4 892 304 270 33 11 chr17 40347950 40348040 -54924611 + CT-rich Low_complexity Low_complexity 1 92 0 4 892 279 0 0 0 chr17 40348043 40348074 -54924577 + (TCC)n Simple_repeat Simple_repeat 3 33 0 4 892 249 197 0 0 chr17 40348150 40348221 -54924430 + CT-rich Low_complexity Low_complexity 2 72 0 4 892 450 312 27 67 chr17 40348331 40348736 -54923915 - L1_Rod LINE L1 -2508 3339 2951 4 892 41031 5 1 0 chr17 40348767 40355137 -54917514 - L1Md_A LINE L1 0 6582 208 4 892 909 273 51 38 chr17 40355133 40355602 -54917049 - L1_Rod LINE L1 -2895 2952 2478 4 892 189 74 0 0 chr17 40355868 40355895 -54916756 + (ATTG)n Simple_repeat Simple_repeat 1 27 0 4 892 1048 247 50 21 chr17 40355960 40356299 -54916352 - L1_Rod LINE L1 -3348 2499 2151 4 892 535 113 20 10 chr17 40356368 40356466 -54916185 + (TTTTC)n Simple_repeat Simple_repeat 2 100 0 4 892 558 195 76 30 chr17 40356468 40356600 -54916051 - B1_Mur3 SINE Alu 0 149 12 4 892 590 99 11 0 chr17 40356600 40356691 -54915960 + (TTTC)n Simple_repeat Simple_repeat 4 95 0 4 892 222 37 0 0 chr17 40356693 40356720 -54915931 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 4 892 585 230 224 0 chr17 40356723 40356888 -54915763 - B3 SINE B2 -14 202 1 4 892 307 309 50 63 chr17 40357030 40357189 -54915462 + Lx7 LINE L1 7204 7360 -336 4 892 1621 285 46 20 chr17 40357233 40357872 -54914779 - L1_Rod LINE L1 -3745 2102 1440 4 892 207 0 0 0 chr17 40357872 40357895 -54914756 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 892 1621 285 46 20 chr17 40357895 40357992 -54914659 - L1_Rod LINE L1 -4408 1439 1347 4 892 428 328 52 52 chr17 40359676 40359888 -54912763 + B3 SINE B2 4 215 -1 4 892 37 39 0 0 chr17 40359932 40359983 -54912668 + AT_rich Low_complexity Low_complexity 1 51 0 4 892 1373 211 84 46 chr17 40360075 40360582 -54912069 + BGLII_B LTR ERVK 2 436 -5 4 892 261 256 24 71 chr17 40361339 40361423 -54911228 + PB1D9 SINE Alu 33 112 -8 4 892 476 322 26 83 chr17 40361763 40361919 -54910732 + RSINE1 SINE B4 3 149 -16 4 892 31 0 0 0 chr17 40361962 40361993 -54910658 + AT_rich Low_complexity Low_complexity 1 31 0 4 892 22 0 0 0 chr17 40362167 40362189 -54910462 + AT_rich Low_complexity Low_complexity 1 22 0 4 892 868 233 92 49 chr17 40362357 40362641 -54910010 + Lx4B LINE L1 6759 7054 -4 4 892 626 35 12 0 chr17 40362917 40363002 -54909649 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 4 892 393 22 0 0 chr17 40363597 40363643 -54909008 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 892 208 212 104 66 chr17 40363687 40363793 -54908858 - L3 LINE CR1 -4376 113 4 4 892 554 266 47 6 chr17 40364020 40364190 -54908461 + B3A SINE B2 4 180 -18 4 892 22 56 0 0 chr17 40364403 40364439 -54908212 + AT_rich Low_complexity Low_complexity 1 36 0 4 892 746 361 0 0 chr17 40364502 40364685 -54907966 + B3A SINE B2 1 183 -15 4 892 594 338 52 0 chr17 40364709 40364922 -54907729 - Lx9 LINE L1 -924 6720 6497 4 892 301 239 71 118 chr17 40364955 40365277 -54907374 + Lx9 LINE L1 7336 7642 -2 4 892 1703 201 39 15 chr17 40366613 40366975 -54905676 - MT2B LTR ERVL -3 598 217 4 892 567 29 0 0 chr17 40366975 40367044 -54905607 + (TG)n Simple_repeat Simple_repeat 1 69 0 4 892 1472 245 70 156 chr17 40367044 40367205 -54905446 - MT2B LTR ERVL -368 216 8 4 892 391 206 20 30 chr17 40367230 40367330 -54905321 - ORR1A3-int LTR MaLR -1313 650 552 4 892 584 217 8 0 chr17 40367330 40367450 -54905201 - MERVL_2A-int LTR ERVL -78 5683 5563 4 892 450 36 0 0 chr17 40367450 40367506 -54905145 + (GA)n Simple_repeat Simple_repeat 1 56 0 4 892 291 53 0 0 chr17 40367512 40367550 -54905101 + MT2_Mm LTR ERVL 451 488 -5 4 892 5478 198 56 21 chr17 40367573 40368774 -54903877 + MTB_Mm-int LTR MaLR 16 1258 0 4 892 1739 191 37 32 chr17 40368774 40369179 -54903472 + MTB_Mm LTR MaLR 1 407 0 4 893 708 215 0 22 chr17 40370843 40370967 -54901684 + B1_Mur4 SINE Alu 16 137 -13 4 893 213 39 0 0 chr17 40370967 40370993 -54901658 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 893 708 215 0 22 chr17 40370993 40371006 -54901645 + B1_Mur4 SINE Alu 138 150 0 4 893 409 341 55 70 chr17 40371091 40371290 -54901361 + B3 SINE B2 17 212 -4 4 893 21 0 0 0 chr17 40371451 40371472 -54901179 + AT_rich Low_complexity Low_complexity 1 21 0 4 893 540 353 43 0 chr17 40374077 40374261 -54898390 - B3A SINE B2 0 198 7 4 893 291 28 0 0 chr17 40375159 40375195 -54897456 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 893 254 281 0 86 chr17 40375195 40375265 -54897386 - ID4 SINE ID -11 72 9 4 893 351 0 0 0 chr17 40375331 40375370 -54897281 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 893 26 30 0 0 chr17 40375565 40375598 -54897053 + AT_rich Low_complexity Low_complexity 1 33 0 4 893 857 132 73 0 chr17 40375892 40376028 -54896623 + B1_Mus1 SINE Alu 3 148 0 4 893 1514 254 27 15 chr17 40376539 40376951 -54895700 - MTC LTR MaLR 0 421 5 4 893 474 33 0 0 chr17 40377085 40377145 -54895506 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 893 401 392 39 22 chr17 40377202 40377434 -54895217 - B4A SINE B4 -53 239 4 4 893 343 383 82 11 chr17 40379546 40379744 -54892907 + B3A SINE B2 1 207 -9 4 893 784 212 147 5 chr17 40380232 40380422 -54892229 + RLTR22_Mur LTR ERVK 1599 1815 -33 4 893 1402 126 90 10 chr17 40380477 40380701 -54891950 - L1_Mur2 LINE L1 -1005 4872 4637 4 893 198 0 0 0 chr17 40380701 40380723 -54891928 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 4 893 1402 126 90 10 chr17 40380723 40380786 -54891865 - L1_Mur2 LINE L1 -1241 4636 4563 4 893 3502 204 28 0 chr17 40380784 40381256 -54891395 + L1_Mur2 LINE L1 4865 5352 -525 4 893 2024 185 10 3 chr17 40381256 40381646 -54891005 + Lx LINE L1 6255 6647 -7 4 893 3502 204 28 0 chr17 40381646 40381895 -54890756 + L1_Mur2 LINE L1 5353 5604 -273 4 893 22 0 0 0 chr17 40381975 40381997 -54890654 + AT_rich Low_complexity Low_complexity 1 22 0 4 893 22 80 0 0 chr17 40382281 40382331 -54890320 + AT_rich Low_complexity Low_complexity 1 50 0 4 893 537 44 0 0 chr17 40382373 40382441 -54890210 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 893 294 125 0 0 chr17 40382441 40382488 -54890163 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 893 236 352 0 11 chr17 40382974 40383066 -54889585 + Lx8 LINE L1 7239 7329 -144 5 893 23 54 0 0 chr17 40384100 40384137 -54888514 + AT_rich Low_complexity Low_complexity 1 37 0 5 893 3506 198 87 9 chr17 40384282 40385433 -54887218 + L1_Mur2 LINE L1 794 2051 -3826 5 893 1753 178 20 34 chr17 40385457 40385500 -54887151 - RMER17A LTR ERVK -515 374 340 5 893 1068 31 0 0 chr17 40385500 40385628 -54887023 + (GGAGA)n Simple_repeat Simple_repeat 1 128 0 5 893 2127 112 43 0 chr17 40385628 40385950 -54886701 - RMER17A LTR ERVK -415 336 1 5 893 210 91 0 0 chr17 40385959 40385992 -54886659 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 893 533 115 0 30 chr17 40385994 40386093 -54886558 + L1_Mur2 LINE L1 2063 2158 -3719 5 893 398 331 39 6 chr17 40386220 40386402 -54886249 - Lx9 LINE L1 -204 7440 7253 5 893 534 292 22 39 chr17 40386429 40386607 -54886044 - B3 SINE B2 -1 215 41 5 893 233 347 34 7 chr17 40386607 40386755 -54885896 - Lx9 LINE L1 -419 7225 7074 5 893 25 0 0 0 chr17 40387036 40387061 -54885590 + AT_rich Low_complexity Low_complexity 1 25 0 5 893 16935 189 20 11 chr17 40389548 40394065 -54878586 + L1VL4 LINE L1 423 4977 -909 5 893 626 161 26 45 chr17 40394080 40394236 -54878415 + Lx LINE L1 6499 6651 -3 5 893 304 290 45 22 chr17 40394656 40394790 -54877861 + L1_Rod LINE L1 4243 4379 -1468 5 893 742 178 52 29 chr17 40394844 40395018 -54877633 - MTC-int LTR MaLR -2 1256 1079 5 893 509 241 45 0 chr17 40395077 40395210 -54877441 + Lx6 LINE L1 7304 7442 -18 5 893 28 48 0 0 chr17 40395304 40395346 -54877305 + AT_rich Low_complexity Low_complexity 1 42 0 5 893 198 0 0 0 chr17 40395389 40395411 -54877240 + (TC)n Simple_repeat Simple_repeat 2 23 0 5 893 312 27 0 0 chr17 40395411 40395447 -54877204 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 893 1645 172 7 13 chr17 40396408 40396715 -54875936 - Lx3A LINE L1 -1 6980 6676 5 893 491 108 24 0 chr17 40396718 40396801 -54875850 + Lx LINE L1 6564 6648 -6 5 893 1308 172 4 8 chr17 40396801 40397035 -54875616 + L1_Mm LINE L1 5363 5595 -288 5 893 228 283 202 10 chr17 40397850 40398043 -54874608 + Lx8 LINE L1 7239 7468 -5 5 893 3851 216 32 31 chr17 40398652 40399928 -54872723 + L1_Mur2 LINE L1 788 2066 -3811 5 893 237 98 0 0 chr17 40399928 40399969 -54872682 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 893 3851 186 23 24 chr17 40399969 40400063 -54872588 + L1_Mur2 LINE L1 2067 2158 -3719 5 893 368 319 73 6 chr17 40400144 40400308 -54872343 - Lx9 LINE L1 -217 7427 7253 5 893 497 302 35 17 chr17 40400341 40400513 -54872138 - B3 SINE B2 0 216 42 5 893 466 162 2 1 chr17 40401064 40401159 -54871492 - L1_Mur2 LINE L1 -3542 2341 2247 5 893 4390 160 29 87 chr17 40401159 40402105 -54870546 - RLTR13D6 LTR ERVK -11 891 1 5 893 1061 138 21 0 chr17 40402106 40402294 -54870357 - L1_Mur2 LINE L1 -3621 2256 2065 5 893 369 0 0 0 chr17 40402606 40402647 -54870004 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 893 317 340 24 55 chr17 40402711 40402876 -54869775 - Lx8 LINE L1 -214 7259 7100 5 893 572 370 17 21 chr17 40402915 40403155 -54869496 + MTE2b LTR MaLR 1 239 -140 5 893 447 19 0 0 chr17 40403405 40403457 -54869194 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 893 450 53 0 0 chr17 40404208 40404265 -54868386 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 893 612 328 53 55 chr17 40404365 40404798 -54867853 + L1MC1 LINE L1 5585 6016 -317 5 893 438 20 0 0 chr17 40405054 40405105 -54867546 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 893 769 131 13 0 chr17 40405212 40405365 -54867286 + (CA)n Simple_repeat Simple_repeat 2 156 0 5 893 352 202 152 34 chr17 40405383 40405501 -54867150 + Lx4B LINE L1 6918 7049 -9 5 893 457 215 53 16 chr17 40405970 40406123 -54866528 - RLTR9A LTR ERVK -6 403 231 5 893 21 0 0 0 chr17 40406285 40406306 -54866345 + AT_rich Low_complexity Low_complexity 1 21 0 5 893 276 38 36 36 chr17 40406481 40406536 -54866115 + (TTTTG)n Simple_repeat Simple_repeat 1 55 0 5 893 1172 55 7 0 chr17 40406536 40406682 -54865969 - B1_Mus2 SINE Alu 0 147 1 5 893 18678 163 57 15 chr17 40408200 40408535 -54864116 - RMER16-int LTR ERVK -1430 3976 3620 5 893 2805 37 49 3 chr17 40408535 40408884 -54863767 + RLTR10B2 LTR ERVK 1 365 0 5 893 18678 163 57 15 chr17 40408884 40412124 -54860527 - RMER16-int LTR ERVK -1787 3619 253 5 893 423 0 0 0 chr17 40412530 40412577 -54860074 + (GTTTG)n Simple_repeat Simple_repeat 2 48 0 5 893 407 243 31 50 chr17 40412949 40413097 -54859554 - RLTR9A LTR ERVK -10 358 218 5 893 1323 227 22 0 chr17 40413261 40413612 -54859039 + L1Md_F2 LINE L1 883 1240 -5417 5 893 17327 188 28 117 chr17 40413612 40416673 -54855978 + L1Md_F2 LINE L1 1438 4431 -1446 5 893 3588 5 0 0 chr17 40416673 40417075 -54855576 + L1Md_A LINE L1 6181 6582 0 5 893 17327 151 20 79 chr17 40417075 40419314 -54853337 + L1Md_F2 LINE L1 4432 6316 -266 5 893 873 260 47 111 chr17 40419352 40419438 -54853213 - BGLII_B LTR ERVK -2 439 354 5 893 450 0 0 0 chr17 40419438 40419488 -54853163 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 893 873 260 47 111 chr17 40419488 40419781 -54852870 - BGLII_B LTR ERVK -88 353 84 5 893 4871 225 22 19 chr17 40419781 40420636 -54852015 + Lx5 LINE L1 5782 6640 -410 5 893 3804 51 0 4 chr17 40420636 40421109 -54851542 + L1Md_F2 LINE L1 6100 6570 -12 5 893 4871 225 22 19 chr17 40421109 40421344 -54851307 + Lx5 LINE L1 6641 6875 -175 5 893 192 40 0 0 chr17 40421417 40421442 -54851209 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 5 893 2942 61 200 9 chr17 40421912 40422342 -54850309 + RLTR1B LTR ERV1 1 512 0 5 893 5254 123 11 28 chr17 40422908 40423763 -54848888 - L1_Mus3 LINE L1 -6 6632 5793 5 893 3447 87 8 2 chr17 40424423 40424897 -54847754 - L1_Mus1 LINE L1 -1 6566 6090 5 893 232 240 127 51 chr17 40425133 40425212 -54847439 - PB1D10 SINE Alu 0 117 33 5 893 408 20 0 0 chr17 40426536 40426585 -54846066 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 893 29 0 0 0 chr17 40426858 40426887 -54845764 + AT_rich Low_complexity Low_complexity 1 29 0 5 893 440 245 29 7 chr17 40426888 40427028 -54845623 - Lx4A LINE L1 -1 7057 6915 5 893 795 350 64 35 chr17 40427209 40427694 -54844957 + Lx8 LINE L1 6555 7053 -420 5 893 273 151 0 0 chr17 40427698 40427751 -54844900 + T-rich Low_complexity Low_complexity 1 53 0 5 893 493 162 9 9 chr17 40427807 40427919 -54844732 - L1_Mus3 LINE L1 -2 6636 6525 5 893 1046 99 0 0 chr17 40427919 40428061 -54844590 - B1_Mus1 SINE Alu -5 143 2 5 893 834 76 0 30 chr17 40428693 40428828 -54843823 + (GAAA)n Simple_repeat Simple_repeat 2 132 0 5 893 184 100 50 0 chr17 40428924 40428964 -54843687 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 893 1624 297 53 27 chr17 40429138 40429788 -54842863 - L1_Rod LINE L1 -3748 2099 1440 5 893 387 0 0 0 chr17 40429788 40429831 -54842820 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 893 1624 297 53 27 chr17 40429831 40429990 -54842661 - L1_Rod LINE L1 -4408 1439 1269 5 893 220 266 0 12 chr17 40430033 40430113 -54842538 + (TTTG)n Simple_repeat Simple_repeat 2 80 0 5 893 216 97 0 0 chr17 40430154 40430185 -54842466 + (T)n Simple_repeat Simple_repeat 1 31 0 5 893 429 400 0 61 chr17 40431670 40431867 -54840784 + B3 SINE B2 4 188 -28 5 893 30 59 0 0 chr17 40431948 40431999 -54840652 + AT_rich Low_complexity Low_complexity 1 51 0 5 893 1410 246 62 42 chr17 40432090 40432683 -54839968 + BGLII_B LTR ERVK 16 505 -48 5 893 242 350 40 0 chr17 40433811 40433911 -54838740 - B1_Mur3 SINE Alu -20 129 26 5 893 516 294 26 83 chr17 40434110 40434266 -54838385 + RSINE1 SINE B4 3 149 -16 5 893 858 221 93 46 chr17 40434705 40434985 -54837666 + Lx4B LINE L1 6759 7051 -7 5 893 27 0 0 0 chr17 40435070 40435097 -54837554 + AT_rich Low_complexity Low_complexity 1 27 0 5 893 934 116 6 11 chr17 40435269 40435444 -54837207 + (TAGA)n Simple_repeat Simple_repeat 4 177 0 5 893 236 280 0 123 chr17 40436010 40436049 -54836602 - Charlie6 DNA MER1_type -1845 1655 1621 5 893 465 71 0 0 chr17 40436049 40436119 -54836532 + (TG)n Simple_repeat Simple_repeat 1 70 0 5 893 236 280 0 123 chr17 40436119 40436193 -54836458 - Charlie6 DNA MER1_type -1880 1620 1556 5 893 532 293 28 28 chr17 40436497 40436676 -54835975 + B3A SINE B2 5 183 -15 5 893 189 0 0 0 chr17 40436834 40436855 -54835796 + (T)n Simple_repeat Simple_repeat 1 21 0 5 893 23 0 0 0 chr17 40436904 40436927 -54835724 + AT_rich Low_complexity Low_complexity 1 23 0 5 893 789 333 0 0 chr17 40436993 40437173 -54835478 + B3A SINE B2 4 183 -15 5 893 637 308 101 0 chr17 40437197 40437424 -54835227 - Lx9 LINE L1 -924 6720 6471 5 893 301 289 105 7 chr17 40437446 40437599 -54835052 + Lx9 LINE L1 7336 7503 -141 5 893 1497 261 151 39 chr17 40439161 40439530 -54833121 - MT2B LTR ERVL -3 598 217 5 893 441 0 0 0 chr17 40439530 40439579 -54833072 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 893 1497 261 151 39 chr17 40439579 40439744 -54832907 - MT2B LTR ERVL -385 216 5 5 893 377 155 17 157 chr17 40439765 40439880 -54832771 - ORR1A3-int LTR MaLR -1313 650 552 5 893 554 208 25 0 chr17 40439880 40440000 -54832651 - MERVL_2A-int LTR ERVL -78 5683 5561 5 893 246 133 0 43 chr17 40440015 40440062 -54832589 + MT2B2 LTR ERVL 535 579 -5 5 893 5168 219 58 22 chr17 40440088 40441288 -54831363 + MTB_Mm-int LTR MaLR 16 1258 0 5 893 1666 194 36 53 chr17 40441288 40441702 -54830949 + MTB_Mm LTR MaLR 1 407 0 5 893 29 28 0 0 chr17 40443305 40443341 -54829310 + AT_rich Low_complexity Low_complexity 1 36 0 5 893 748 179 0 7 chr17 40443382 40443517 -54829134 + B1_Mur4 SINE Alu 16 149 -1 5 893 273 345 51 74 chr17 40443613 40443829 -54828822 + B3 SINE B2 2 212 -4 5 893 3081 87 5 9 chr17 40443912 40444352 -54828299 - L1Md_F2 LINE L1 0 6582 6145 5 893 588 350 21 0 chr17 40447101 40447287 -54825364 - B3A SINE B2 -2 196 7 5 893 236 234 32 0 chr17 40447356 40447450 -54825201 + (TA)n Simple_repeat Simple_repeat 1 97 0 5 893 4685 95 9 6 chr17 40447450 40448117 -54824534 - L1_Mus1 LINE L1 -5 6562 5894 5 893 471 73 0 0 chr17 40448961 40449029 -54823622 + (TG)n Simple_repeat Simple_repeat 1 68 0 5 893 232 271 0 0 chr17 40449029 40449077 -54823574 - ID SINE ID -150 74 27 5 893 230 297 94 0 chr17 40449077 40449093 -54823558 - ID4 SINE ID -10 73 4 6 893 806 148 73 7 chr17 40449701 40449837 -54822814 + B1_Mus1 SINE Alu 3 147 -1 6 893 1436 260 34 17 chr17 40450378 40450734 -54821917 - MTC LTR MaLR 0 421 60 6 893 15777 22 0 0 chr17 40450734 40452583 -54820068 - L1Md_T LINE L1 -578 5305 3457 6 893 2353 8 0 0 chr17 40452581 40452843 -54819808 + L1Md_T LINE L1 5325 5586 -297 6 893 8505 30 0 0 chr17 40452843 40453839 -54818812 + L1Md_T LINE L1 5587 6582 0 6 893 348 243 14 0 chr17 40453853 40453927 -54818724 - MTC LTR MaLR -342 79 5 6 893 442 352 39 26 chr17 40454139 40454372 -54818279 - B4A SINE B4 -53 239 4 6 893 348 380 82 6 chr17 40456466 40456625 -54816026 + B3A SINE B2 1 171 -27 6 893 1163 77 12 0 chr17 40456849 40457019 -54815632 + L1Md_F2 LINE L1 6411 6582 0 6 893 345 62 0 0 chr17 40458659 40458707 -54813944 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 893 551 62 12 0 chr17 40458707 40458787 -54813864 + (GA)n Simple_repeat Simple_repeat 2 82 0 6 893 3592 132 10 68 chr17 40459004 40459632 -54813019 + Lx3A LINE L1 6381 6971 -10 6 893 26 50 0 0 chr17 40459635 40459675 -54812976 + AT_rich Low_complexity Low_complexity 1 40 0 6 893 901 211 138 22 chr17 40459862 40460094 -54812557 + RLTR22_Mur LTR ERVK 1590 1848 0 6 893 1269 168 62 46 chr17 40460116 40460359 -54812292 - L1_Mur2 LINE L1 -1005 4872 4623 6 893 198 0 0 0 chr17 40460359 40460381 -54812270 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 6 893 1269 168 62 46 chr17 40460381 40460442 -54812209 - L1_Mur2 LINE L1 -1255 4622 4563 6 893 3606 195 29 3 chr17 40460444 40460914 -54811737 + L1_Mur2 LINE L1 4868 5354 -523 6 893 2188 168 10 5 chr17 40460914 40461304 -54811347 + Lx LINE L1 6257 6648 -6 6 893 3606 195 29 3 chr17 40461304 40461553 -54811098 + L1_Mur2 LINE L1 5355 5605 -272 6 893 26 0 0 0 chr17 40461628 40461654 -54810997 + AT_rich Low_complexity Low_complexity 1 26 0 6 893 814 136 0 13 chr17 40462041 40462198 -54810453 + (TA)n Simple_repeat Simple_repeat 2 156 0 6 893 3837 79 2 6 chr17 40462575 40463083 -54809568 + L1Md_F2 LINE L1 6075 6580 -2 6 893 254 320 32 45 chr17 40463218 40463372 -54809279 + Lx8 LINE L1 7239 7390 -83 6 893 4346 211 79 33 chr17 40464456 40465738 -54806913 + L1_Mur2 LINE L1 717 2055 -3822 6 893 390 21 0 0 chr17 40465738 40465785 -54806866 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 893 4346 171 25 30 chr17 40465785 40465867 -54806784 + L1_Mur2 LINE L1 2056 2139 -3738 6 893 420 336 33 9 chr17 40465976 40466186 -54806465 - Lx9 LINE L1 -177 7467 7253 6 893 546 290 35 12 chr17 40466219 40466390 -54806261 - B3 SINE B2 0 216 42 6 893 219 343 30 10 chr17 40466894 40466994 -54805657 - B3 SINE B2 -31 185 84 6 893 12941 134 13 5 chr17 40469319 40471024 -54801627 + L1VL4 LINE L1 68 1788 -1771 6 893 2283 106 0 116 chr17 40471024 40471430 -54801221 - RLTR10D LTR ERVK 0 359 1 6 893 12941 116 9 8 chr17 40471430 40472618 -54800033 + L1VL4 LINE L1 1789 2974 -585 6 893 4415 78 43 14 chr17 40472618 40473244 -54799407 + L1_Mus1 LINE L1 5924 6567 0 6 893 12888 178 165 8 chr17 40473244 40475553 -54797098 + Lx LINE L1 4331 6654 0 6 893 25 0 0 0 chr17 40475914 40475939 -54796712 + AT_rich Low_complexity Low_complexity 1 25 0 6 893 310 282 45 22 chr17 40475963 40476097 -54796554 + L1_Rod LINE L1 4243 4379 -1468 6 893 801 189 17 6 chr17 40476150 40476326 -54796325 - MTC-int LTR MaLR -2 1256 1079 6 893 598 205 24 0 chr17 40476389 40476516 -54796135 + Lx6 LINE L1 7313 7442 -18 6 893 283 91 0 0 chr17 40476516 40476571 -54796080 - L1_Mus4 LINE L1 -1 6635 6581 6 893 29 47 0 0 chr17 40476611 40476654 -54795997 + AT_rich Low_complexity Low_complexity 1 43 0 6 893 351 0 0 0 chr17 40477375 40477414 -54795237 + (TATG)n Simple_repeat Simple_repeat 2 40 0 6 893 2687 109 7 36 chr17 40477422 40477860 -54794791 - Lx3A LINE L1 -16 6965 6541 6 893 27 0 0 0 chr17 40478156 40478183 -54794468 + AT_rich Low_complexity Low_complexity 1 27 0 6 893 1681 255 33 53 chr17 40478193 40478645 -54794006 - Lx5 LINE L1 -3 7047 6605 6 893 293 359 34 0 chr17 40478646 40478763 -54793888 + RLTR25A LTR ERVK 1 121 -982 6 893 226 279 26 51 chr17 40479823 40479940 -54792711 + RLTR25B LTR ERVK 915 1028 0 6 893 814 211 7 0 chr17 40479942 40480094 -54792557 - Lx5 LINE L1 -443 6607 6455 6 893 406 57 0 0 chr17 40480096 40480149 -54792502 - L1Md_F2 LINE L1 -766 5818 5766 6 893 5305 89 10 3 chr17 40480149 40480879 -54791772 + L1Md_F2 LINE L1 5829 6563 -19 6 893 486 0 0 0 chr17 40480890 40480944 -54791707 + (TA)n Simple_repeat Simple_repeat 1 54 0 6 893 1319 179 73 7 chr17 40480945 40481220 -54791431 - Lx5 LINE L1 -584 6466 6174 6 893 663 345 0 10 chr17 40481250 40481449 -54791202 - B3 SINE B2 -1 215 19 6 893 276 295 117 41 chr17 40481789 40481934 -54790717 - RLTR25A LTR ERVK 0 1103 948 6 893 314 250 31 37 chr17 40482124 40482286 -54790365 + (CTCA)n Simple_repeat Simple_repeat 3 163 0 6 893 424 379 21 21 chr17 40483398 40483638 -54789013 + Lx8 LINE L1 7088 7327 -146 6 893 468 51 0 0 chr17 40483638 40483697 -54788954 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 893 198 0 0 0 chr17 40483785 40483807 -54788844 + (TG)n Simple_repeat Simple_repeat 1 22 0 6 893 279 0 0 0 chr17 40484840 40484871 -54787780 + (TC)n Simple_repeat Simple_repeat 2 32 0 6 893 7171 179 37 9 chr17 40484947 40487434 -54785217 - Lx4A LINE L1 -10 7048 4469 6 893 30857 102 9 4 chr17 40487434 40493357 -54779294 - L1_Mus2 LINE L1 -212 6354 403 6 893 1870 188 133 1 chr17 40493343 40493925 -54778726 - Lx4A LINE L1 -2197 3683 2927 6 893 4223 128 41 41 chr17 40493918 40494752 -54777899 - Lx4A LINE L1 -3738 2139 1306 6 893 396 0 0 0 chr17 40494962 40495006 -54777645 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 893 764 317 3 55 chr17 40495105 40495452 -54777199 + L1MC1 LINE L1 5585 5913 -420 6 893 180 0 0 0 chr17 40495479 40495499 -54777152 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 6 893 939 144 12 30 chr17 40495592 40495757 -54776894 - B2_Mm2 SINE B2 -14 181 20 6 893 4481 96 9 0 chr17 40495757 40496391 -54776260 + L1_Mus1 LINE L1 5928 6567 0 6 893 31 26 0 0 chr17 40496661 40496699 -54775952 + AT_rich Low_complexity Low_complexity 1 38 0 6 893 498 173 23 0 chr17 40496793 40496926 -54775725 + (CA)n Simple_repeat Simple_repeat 1 136 0 6 893 566 176 39 31 chr17 40496944 40497073 -54775578 + Lx4B LINE L1 6918 7047 -11 6 893 407 250 34 41 chr17 40497551 40497705 -54774946 - RLTR9A LTR ERVK -2 366 231 6 893 21 0 0 0 chr17 40497867 40497888 -54774763 + AT_rich Low_complexity Low_complexity 1 21 0 6 893 419 335 28 60 chr17 40498313 40498814 -54773837 - RMER16-int LTR ERVK -459 4947 4463 6 893 1058 195 10 0 chr17 40499582 40499777 -54772874 - RMER16-int LTR ERVK -1433 3973 3777 6 893 1397 75 5 5 chr17 40499777 40499966 -54772685 + B2_Mm1t SINE B2 1 189 -4 6 111 13699 150 47 25 chr17 40500029 40502736 -54769915 - RMER16-int LTR ERVK -1701 3705 939 1 894 36124 44 1 3 chr17 40502743 40509150 -54763501 - L1Md_T LINE L1 0 6585 92 2 894 3235 146 57 35 chr17 40509155 40509817 -54762834 - RMER16-int LTR ERVK -4473 933 257 1 894 3402 225 49 49 chr17 40509990 40510579 -54762072 + L1_Mur2 LINE L1 1422 2048 -3829 3 894 504 0 0 0 chr17 40510579 40510635 -54762016 + (GA)n Simple_repeat Simple_repeat 2 57 0 4 894 3402 225 49 49 chr17 40510635 40511207 -54761444 + L1_Mur2 LINE L1 2049 2583 -3294 3 894 31928 78 4 7 chr17 40511217 40517455 -54755196 - L1Md_F2 LINE L1 0 6582 358 5 894 5257 156 47 7 chr17 40517454 40517910 -54754741 + L1_Mur2 LINE L1 2571 3060 -2817 3 894 917 101 7 0 chr17 40517910 40518049 -54754602 + (GAGAA)n Simple_repeat Simple_repeat 1 140 0 6 894 5257 156 47 7 chr17 40518049 40518725 -54753926 + L1_Mur2 LINE L1 3061 3748 -2129 3 894 845 271 55 82 chr17 40518727 40518814 -54753837 - BGLII_B LTR ERVK -2 439 351 7 894 792 50 0 0 chr17 40518814 40518915 -54753736 + (TAGA)n Simple_repeat Simple_repeat 2 102 0 8 894 845 271 55 82 chr17 40518915 40518984 -54753667 - BGLII_B LTR ERVK -91 350 274 7 894 315 0 0 0 chr17 40518984 40519019 -54753632 + (TA)n Simple_repeat Simple_repeat 1 35 0 9 894 845 271 55 82 chr17 40519019 40519227 -54753424 - BGLII_B LTR ERVK -168 273 85 7 894 4625 220 31 13 chr17 40519227 40519409 -54753242 + Lx5 LINE L1 5782 5962 -1088 1 894 324 0 0 0 chr17 40519409 40519445 -54753206 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 1 894 4625 220 31 13 chr17 40519445 40520354 -54752297 + Lx5 LINE L1 5963 6893 -157 1 894 5266 35 26 0 chr17 40520364 40520989 -54751662 + L1Md_F2 LINE L1 5928 6568 -14 1 894 28 29 0 0 chr17 40520989 40521024 -54751627 + AT_rich Low_complexity Low_complexity 1 35 0 1 894 25208 124 15 25 chr17 40522040 40523937 -54748714 - L1_Mus3 LINE L1 0 6638 4738 1 894 432 55 0 0 chr17 40523937 40523992 -54748659 + (TTTTG)n Simple_repeat Simple_repeat 2 56 0 1 894 25208 131 13 50 chr17 40523992 40524139 -54748512 - L1_Mus3 LINE L1 -1146 4737 4612 1 894 3745 110 22 5 chr17 40524139 40524716 -54747935 - L1_Mus1 LINE L1 -1 6566 5980 1 894 25208 131 13 50 chr17 40524716 40526204 -54746447 - L1_Mus3 LINE L1 -1272 4611 3185 1 894 270 0 0 0 chr17 40526204 40526234 -54746417 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 1 894 25208 126 9 35 chr17 40526234 40527555 -54745096 - L1_Mus3 LINE L1 -2699 3184 1864 1 894 691 66 0 0 chr17 40527555 40527646 -54745005 + RLTRETN_Mm LTR ERVK 1 91 -231 1 894 25208 126 9 35 chr17 40527646 40529098 -54743553 - L1_Mus3 LINE L1 -2699 1863 409 1 894 1951 143 5 53 chr17 40529139 40529515 -54743136 - L1_Mus3 LINE L1 -6 6632 6275 1 894 1436 131 8 0 chr17 40529517 40529762 -54742889 + Lx3A LINE L1 4188 4434 -1443 2 894 1832 27 5 0 chr17 40529762 40529985 -54742666 + L1Md_T LINE L1 5363 5586 -297 2 894 8440 30 6 0 chr17 40529985 40531003 -54741648 + L1Md_T LINE L1 5587 6582 0 2 894 5351 183 6 86 chr17 40531003 40532430 -54740221 + Lx3A LINE L1 4430 5742 -144 2 894 9155 122 26 3 chr17 40532408 40533986 -54738665 + Lx3A LINE L1 3761 5374 -512 2 894 5369 104 9 45 chr17 40533986 40535220 -54737431 + L1VL1 LINE L1 427 1608 -4275 2 894 5048 112 9 0 chr17 40535220 40535969 -54736682 + L1_Mus1 LINE L1 5811 6566 -1 2 894 7998 110 13 4 chr17 40535980 40536516 -54736135 + Lx3A LINE L1 5359 5896 -1085 2 894 225 0 0 0 chr17 40536516 40536541 -54736110 + (CGAGG)n Simple_repeat Simple_repeat 2 26 0 2 894 7998 127 11 21 chr17 40536541 40536573 -54736078 + Lx3A LINE L1 5897 5921 -1060 2 894 261 0 0 0 chr17 40536573 40536602 -54736049 + (GGGGA)n Simple_repeat Simple_repeat 2 30 0 2 894 1132 96 6 6 chr17 40536605 40536783 -54735868 + (GAGAA)n Simple_repeat Simple_repeat 1 178 0 2 894 7998 127 11 21 chr17 40536783 40537833 -54734818 + Lx3A LINE L1 5922 6965 -16 2 894 189 0 0 0 chr17 40537833 40537854 -54734797 + (TTAA)n Simple_repeat Simple_repeat 1 21 0 2 894 22 56 0 0 chr17 40537861 40537897 -54734754 + AT_rich Low_complexity Low_complexity 1 36 0 2 894 548 294 60 25 chr17 40540686 40541063 -54731588 - L1MA4 LINE L1 -231 5925 5531 2 894 351 0 0 0 chr17 40541214 40541253 -54731398 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 3 894 1080 52 15 0 chr17 40541254 40541389 -54731262 - B1_Mus1 SINE Alu -11 137 1 3 894 354 23 0 0 chr17 40542070 40542113 -54730538 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 894 358 186 0 28 chr17 40543496 40543568 -54729083 + L1_Mur2 LINE L1 5557 5626 -251 3 894 455 179 134 0 chr17 40543562 40543674 -54728977 - L1_Mur2 LINE L1 -3213 2664 2538 3 894 819 0 0 0 chr17 40544095 40544186 -54728465 + (GAA)n Simple_repeat Simple_repeat 3 93 0 3 894 1364 258 13 0 chr17 40544701 40545007 -54727644 - MTC LTR MaLR -4 417 108 3 894 6945 118 9 5 chr17 40545010 40546534 -54726117 + L1_Mus3 LINE L1 5111 6638 0 3 894 667 100 0 18 chr17 40546639 40546751 -54725900 + (GGA)n Simple_repeat Simple_repeat 2 111 0 3 894 1278 241 5 8 chr17 40546806 40547222 -54725429 + Lx4B LINE L1 6501 7008 -50 3 894 562 271 0 5 chr17 40547229 40547386 -54725265 - MTC LTR MaLR -265 154 1 3 894 360 336 9 0 chr17 40547735 40547851 -54724800 - Lx8 LINE L1 -246 7227 7111 4 894 1102 299 83 27 chr17 40547909 40548682 -54723969 - L1M2 LINE L1 -769 5374 4559 4 894 183 42 0 0 chr17 40548784 40548808 -54723843 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 894 370 301 146 40 chr17 40548820 40549190 -54723461 - L1M2 LINE L1 -1746 4397 3989 4 894 1156 75 0 7 chr17 40550288 40550436 -54722215 + B1_Mus2 SINE Alu 1 147 0 4 894 182 37 37 0 chr17 40550445 40550472 -54722179 + (CAA)n Simple_repeat Simple_repeat 2 29 0 4 894 486 250 36 24 chr17 40550569 40550737 -54721914 - Lx6 LINE L1 -1 7459 7290 4 894 534 124 9 28 chr17 40550736 40550844 -54721807 - Lx6 LINE L1 -1578 5882 5777 4 894 7298 65 9 14 chr17 40550832 40551961 -54720690 - L1Md_F2 LINE L1 0 6582 5460 4 894 1922 209 41 53 chr17 40551977 40552486 -54720165 - Lx6 LINE L1 -90 5790 5288 4 894 572 40 13 0 chr17 40552486 40552561 -54720090 + (TC)n Simple_repeat Simple_repeat 1 76 0 4 894 843 289 50 69 chr17 40552561 40552636 -54720015 - L1_Rod LINE L1 -583 5264 5186 4 894 6003 202 30 11 chr17 40552639 40554161 -54718490 - Lx5 LINE L1 0 7050 5490 5 894 1646 208 13 0 chr17 40554158 40554552 -54718099 - Lx5 LINE L1 -516 5364 4966 5 894 232 327 78 0 chr17 40555396 40555549 -54717102 + L1M2 LINE L1 2149 2313 -4536 5 894 273 308 87 48 chr17 40556919 40557045 -54715606 + B1_Mus2 SINE Alu 1 131 -16 5 894 6985 107 14 1 chr17 40557080 40558712 -54713939 - L1_Mus3 LINE L1 0 6638 4986 5 894 31127 30 2 0 chr17 40558906 40562836 -54709815 + L1Md_T LINE L1 1647 5586 -297 5 894 8041 52 2 2 chr17 40562836 40563832 -54708819 + L1Md_T LINE L1 5587 6582 0 5 894 653 102 0 0 chr17 40563845 40563943 -54708708 + BC1_Mm scRNA scRNA 1 98 -54 5 894 497 315 92 18 chr17 40563956 40564173 -54708478 - ORR1D2 LTR MaLR -126 233 1 5 894 899 373 52 27 chr17 40564259 40565286 -54707365 + Lx9 LINE L1 6372 7423 -221 5 894 654 224 178 55 chr17 40565442 40565678 -54706973 + RLTR10A LTR ERVK 147 411 0 5 894 24 0 0 0 chr17 40565747 40565771 -54706880 + AT_rich Low_complexity Low_complexity 1 24 0 5 894 291 265 8 66 chr17 40565832 40565953 -54706698 + L1_Mur3 LINE L1 3710 3823 -2057 6 894 680 341 0 6 chr17 40565962 40566145 -54706506 + MTE2a LTR MaLR 10 191 -188 6 894 622 232 44 17 chr17 40566271 40566451 -54706200 + RMER1C Other Other 845 1029 -313 6 894 24 32 0 0 chr17 40566637 40566668 -54705983 + AT_rich Low_complexity Low_complexity 1 31 0 6 894 225 211 0 0 chr17 40566785 40566842 -54705809 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 894 25 0 0 0 chr17 40567471 40567496 -54705155 + AT_rich Low_complexity Low_complexity 1 25 0 6 894 251 260 111 49 chr17 40567868 40567949 -54704702 - PB1D10 SINE Alu 0 117 32 6 894 240 238 0 0 chr17 40569287 40569350 -54703301 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 894 33 0 0 0 chr17 40569634 40569667 -54702984 + AT_rich Low_complexity Low_complexity 1 33 0 6 894 2014 51 0 8 chr17 40569670 40569925 -54702726 - L1Md_F2 LINE L1 -12 6570 6318 6 894 2618 62 0 0 chr17 40569929 40570268 -54702383 + L1Md_F2 LINE L1 5948 6286 -296 6 894 241 222 11 11 chr17 40570269 40570360 -54702291 - Lx4A LINE L1 -1 7057 6967 7 894 425 0 55 0 chr17 40570698 40570753 -54701898 + (TAAAA)n Simple_repeat Simple_repeat 2 59 0 7 894 4858 46 0 5 chr17 40570979 40571572 -54701079 + L1Md_F2 LINE L1 5980 6569 -13 7 894 36 53 0 0 chr17 40571572 40571629 -54701022 + AT_rich Low_complexity Low_complexity 1 57 0 7 894 376 342 6 24 chr17 40572557 40572722 -54699929 - Lx8 LINE L1 -197 7276 7115 7 894 708 94 0 0 chr17 40573447 40573553 -54699098 + (TTTC)n Simple_repeat Simple_repeat 3 108 0 7 894 2661 40 0 0 chr17 40573857 40574179 -54698472 - L1Md_F2 LINE L1 -2 6580 6259 7 894 4081 76 0 143 chr17 40574179 40574872 -54697779 - L1_Mus1 LINE L1 -9 6558 5965 7 894 373 233 0 0 chr17 40575867 40575957 -54696694 + L1M2 LINE L1 3731 3820 -2323 7 894 430 313 144 6 chr17 40575993 40576160 -54696491 + MTE2a LTR MaLR 1 190 -189 7 894 6622 96 23 12 chr17 40576175 40577147 -54695504 + Lx3_Mus LINE L1 6028 7009 0 8 894 4962 49 3 1 chr17 40577210 40578084 -54694567 - L1Md_F2 LINE L1 -488 6094 5221 8 894 3500 77 12 16 chr17 40578084 40578571 -54694080 + L1Md_F2 LINE L1 6096 6580 -2 8 894 251 220 32 32 chr17 40578571 40578586 -54694065 - L1Md_F2 LINE L1 -897 5243 5227 8 894 254 250 67 0 chr17 40578687 40578747 -54693904 + MTE2b LTR MaLR 59 122 -257 8 894 412 257 182 33 chr17 40579131 40579312 -54693339 + Lx9 LINE L1 6912 7119 -525 8 894 471 301 83 32 chr17 40579327 40579855 -54692796 + L1MC1 LINE L1 5414 5968 -365 8 894 21 0 0 0 chr17 40579868 40579889 -54692762 + AT_rich Low_complexity Low_complexity 1 21 0 8 894 424 230 17 22 chr17 40579889 40580067 -54692584 + (CATA)n Simple_repeat Simple_repeat 2 178 0 8 894 272 306 57 0 chr17 40580790 40580914 -54691737 - Lx6 LINE L1 -1250 6210 6080 8 894 364 343 86 54 chr17 40580993 40581331 -54691320 + MTE-int LTR MaLR 1024 1529 -51 8 894 1782 161 37 3 chr17 40581552 40581875 -54690776 - L1_Mur2 LINE L1 -78 5799 5466 8 894 1068 166 47 0 chr17 40581870 40582026 -54690625 - L1_Mur2 LINE L1 -1419 4458 4300 8 894 636 38 0 0 chr17 40582026 40582105 -54690546 + (GA)n Simple_repeat Simple_repeat 2 80 0 9 894 1068 166 47 0 chr17 40582105 40582183 -54690468 - L1_Mur2 LINE L1 -1578 4299 4215 8 894 5585 199 25 21 chr17 40582183 40583357 -54689294 + Lx4A LINE L1 5879 7056 -2 9 894 857 182 11 0 chr17 40583363 40583539 -54689112 + GA-rich Low_complexity Low_complexity 3 180 0 9 894 268 17 100 17 chr17 40584385 40584445 -54688206 + (CAAAA)n Simple_repeat Simple_repeat 2 66 0 9 894 1391 82 6 0 chr17 40584678 40584861 -54687790 + B2_Mm1t SINE B2 1 184 -9 9 894 675 0 0 0 chr17 40585829 40585904 -54686747 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 9 894 377 70 18 0 chr17 40586853 40586910 -54685741 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 9 894 252 267 10 29 chr17 40586910 40587014 -54685637 - RMER1C Other Other -23 1319 1218 9 894 337 327 13 45 chr17 40587238 40587395 -54685256 - RMER1C Other Other -512 830 679 9 894 850 270 92 5 chr17 40587682 40587942 -54684709 + Lx5 LINE L1 6751 7054 -4 9 894 10557 124 8 28 chr17 40588599 40588814 -54683837 + L1_Mm LINE L1 3044 3261 -2622 9 894 1075 110 0 0 chr17 40588814 40588959 -54683692 + B1_Mus2 SINE Alu 2 146 -1 1 894 10557 124 8 28 chr17 40588959 40590613 -54682038 + L1_Mm LINE L1 3262 4876 -1007 9 894 861 266 92 5 chr17 40591586 40591846 -54680805 - Lx5 LINE L1 -4 7054 6751 1 894 314 340 13 45 chr17 40592133 40592290 -54680361 + RMER1C Other Other 679 830 -512 1 894 260 269 9 28 chr17 40592514 40592621 -54680030 + RMER1C Other Other 1218 1322 -20 1 894 420 328 72 55 chr17 40592747 40592777 -54679874 + L1MD3 LINE L1 7579 7603 -392 1 894 2236 152 37 22 chr17 40592777 40593180 -54679471 - RLTR9E LTR ERVK 0 409 1 1 894 420 328 72 55 chr17 40593180 40593456 -54679195 + L1MD3 LINE L1 7604 7890 -105 1 894 2357 113 67 3 chr17 40593618 40593992 -54678659 - MTB LTR MaLR 0 400 3 1 894 5467 141 99 22 chr17 40593994 40595058 -54677593 - MTB-int LTR MaLR 0 1258 113 1 894 198 0 0 0 chr17 40595058 40595080 -54677571 + (T)n Simple_repeat Simple_repeat 1 22 0 1 894 7774 29 0 0 chr17 40595100 40596049 -54676602 - L1Md_A LINE L1 -1 6581 5633 1 894 646 109 0 0 chr17 40596059 40596151 -54676500 - MTB-int LTR MaLR -1001 97 6 1 894 2768 77 45 0 chr17 40596154 40596533 -54676118 - MTB LTR MaLR -4 396 1 1 894 913 202 60 33 chr17 40597309 40597524 -54675127 + Lx4A LINE L1 6829 7049 -9 1 894 246 253 0 0 chr17 40598034 40598109 -54674542 + Lx9 LINE L1 7527 7601 -43 1 894 3880 143 0 8 chr17 40599214 40599820 -54672831 - MT2B LTR ERVL 0 601 1 1 894 468 82 74 0 chr17 40600002 40600124 -54672527 + CT-rich Low_complexity Low_complexity 2 132 0 1 894 23 33 0 0 chr17 40600278 40600308 -54672343 + AT_rich Low_complexity Low_complexity 1 30 0 1 894 437 34 0 17 chr17 40600691 40600751 -54671900 + (CAAAA)n Simple_repeat Simple_repeat 5 63 0 1 894 36304 14 2 7 chr17 40601165 40606370 -54666281 + L1Md_A LINE L1 416 5585 -298 1 894 8638 25 0 0 chr17 40606371 40607367 -54665284 + L1Md_A LINE L1 5587 6582 0 1 894 192 97 0 0 chr17 40607949 40607980 -54664671 + (A)n Simple_repeat Simple_repeat 1 31 0 1 894 1499 206 209 103 chr17 40608057 40608716 -54663935 + L1VL2 LINE L1 67 795 -5540 1 894 553 258 28 13 chr17 40608909 40609137 -54663514 + Lx9 LINE L1 5709 5974 -1670 1 894 1348 292 128 36 chr17 40609347 40609758 -54662893 - Lx6 LINE L1 -222 7238 6759 1 894 204 97 0 0 chr17 40609758 40609789 -54662862 + (TTCTG)n Simple_repeat Simple_repeat 2 32 0 1 894 1348 263 249 28 chr17 40609789 40610327 -54662324 - Lx6 LINE L1 -702 6758 5916 1 894 492 128 0 0 chr17 40610337 40610415 -54662236 + (A)n Simple_repeat Simple_repeat 1 78 0 1 894 757 217 55 86 chr17 40610419 40610711 -54661940 + Lx5 LINE L1 5623 5905 -1145 1 894 610 301 134 9 chr17 40610715 40611044 -54661607 - ORR1D2 LTR MaLR 0 370 1 1 894 1249 344 46 33 chr17 40611071 40611913 -54660738 + Lx9 LINE L1 6306 7158 -486 1 894 340 338 122 32 chr17 40612079 40612357 -54660294 + Lx8 LINE L1 7165 7467 -6 1 894 283 273 47 64 chr17 40612377 40612549 -54660102 + L1_Mur3 LINE L1 3655 3823 -2057 1 894 529 318 0 0 chr17 40612554 40612680 -54659971 + MTE2a LTR MaLR 2 127 -252 1 894 22 0 0 0 chr17 40612809 40612831 -54659820 + AT_rich Low_complexity Low_complexity 1 22 0 1 894 677 243 44 28 chr17 40612839 40613021 -54659630 + RMER1C Other Other 845 1029 -313 1 894 217 314 54 54 chr17 40613250 40613324 -54659327 + RSINE1 SINE B4 77 150 -15 1 894 431 35 18 0 chr17 40613348 40613405 -54659246 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 894 6446 89 16 46 chr17 40613808 40614865 -54657786 + MusHAL1 LINE L1 1450 2474 -238 1 894 415 46 0 0 chr17 40614861 40614926 -54657725 + MusHAL1 LINE L1 2643 2707 -5 1 894 232 213 27 0 chr17 40615033 40615108 -54657543 + (TTAAA)n Simple_repeat Simple_repeat 2 78 0 1 894 275 287 0 54 chr17 40615498 40615590 -54657061 + MT2B LTR ERVL 178 264 -337 1 894 789 93 0 0 chr17 40615517 40615625 -54657026 + B1_Mm SINE Alu 40 147 0 1 894 261 78 78 0 chr17 40615631 40615695 -54656956 + A-rich Low_complexity Low_complexity 4 72 0 1 894 603 27 0 0 chr17 40615922 40615995 -54656656 + (CA)n Simple_repeat Simple_repeat 1 73 0 1 894 501 215 44 15 chr17 40616283 40616420 -54656231 - Lx4A LINE L1 -3 7055 6915 1 894 1284 321 46 30 chr17 40616610 40617175 -54655476 + Lx8 LINE L1 6563 7136 -337 1 894 2281 292 80 29 chr17 40617635 40618528 -54654123 - Lx6 LINE L1 -189 7271 6334 1 894 4113 140 86 38 chr17 40618583 40619257 -54653394 + RLTR13D1 LTR ERVK 1 687 -119 1 894 429 20 0 0 chr17 40619257 40619307 -54653344 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 894 4113 140 86 38 chr17 40619307 40619399 -54653252 + RLTR13D1 LTR ERVK 688 803 -3 1 894 475 90 13 13 chr17 40619399 40619476 -54653175 - RLTR12A LTR ERVK -491 77 1 1 894 373 432 43 26 chr17 40619476 40619818 -54652833 + MTE-int LTR MaLR 1182 1529 -51 1 894 2593 114 33 92 chr17 40620420 40620932 -54651719 + RLTR45 LTR ERVK 1 482 0 1 894 348 312 74 13 chr17 40621094 40621300 -54651351 + L1MC3 LINE L1 7459 7609 -176 1 894 5389 120 15 1 chr17 40621552 40622361 -54650290 + Lx3_Mus LINE L1 6182 7001 -8 1 894 26 0 0 0 chr17 40622361 40622387 -54650264 + AT_rich Low_complexity Low_complexity 1 26 0 1 894 238 265 12 0 chr17 40623597 40623680 -54648971 + Lx9 LINE L1 7532 7615 -29 1 894 460 341 124 26 chr17 40625158 40625423 -54647228 - RMER1C Other Other -485 857 554 1 894 28 29 0 0 chr17 40625854 40625889 -54646762 + AT_rich Low_complexity Low_complexity 1 35 0 1 894 219 36 0 0 chr17 40626289 40626317 -54646334 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 1 894 482 349 13 85 chr17 40627171 40627547 -54645104 - Lx8 LINE L1 -10 7463 7115 1 894 251 130 19 0 chr17 40628716 40628770 -54643881 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 894 320 133 0 0 chr17 40628812 40628857 -54643794 + HAL1-3A_ME LINE L1 1976 2020 -838 1 894 23 0 0 0 chr17 40629265 40629288 -54643363 + AT_rich Low_complexity Low_complexity 1 23 0 1 894 30 27 0 0 chr17 40629467 40629504 -54643147 + AT_rich Low_complexity Low_complexity 1 37 0 1 894 473 244 58 22 chr17 40629596 40629769 -54642882 - Lx6 LINE L1 -1479 6217 6043 1 894 382 353 53 46 chr17 40629853 40630138 -54642513 + MTE-int LTR MaLR 1243 1529 -51 1 894 2799 96 77 13 chr17 40630359 40630811 -54641840 - ETnERV2-int LTR ERVK -4693 2551 2071 1 894 288 128 57 23 chr17 40630811 40630899 -54641752 + C-rich Low_complexity Low_complexity 4 94 0 1 894 5526 148 29 34 chr17 40630899 40632141 -54640510 - ETnERV2-int LTR ERVK -4598 1210 2 1 111 6234 80 18 6 chr17 40632151 40633027 -54639624 - RLTR13D6 LTR ERVK -15 887 1 1 895 4504 165 73 10 chr17 40633030 40633861 -54638790 + Lx4A LINE L1 6173 7056 -2 1 895 618 151 0 0 chr17 40633873 40633979 -54638672 + GA-rich Low_complexity Low_complexity 3 108 0 1 895 207 0 0 0 chr17 40634682 40634705 -54637946 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 895 312 27 0 0 chr17 40634821 40634858 -54637793 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 895 345 47 0 0 chr17 40634858 40634901 -54637750 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 1 895 1049 136 6 0 chr17 40634903 40635080 -54637571 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 1 895 862 42 17 8 chr17 40635080 40635199 -54637452 + (GGAAA)n Simple_repeat Simple_repeat 5 124 0 1 895 21 57 0 0 chr17 40636824 40636859 -54635792 + AT_rich Low_complexity Low_complexity 1 35 0 1 895 456 51 0 0 chr17 40637361 40637420 -54635231 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 1 895 269 262 18 53 chr17 40637420 40637533 -54635118 - RMER1C Other Other -16 1326 1218 1 895 229 322 0 0 chr17 40637592 40637651 -54635000 - RMER1C Other Other -214 1128 1070 1 895 23 78 0 0 chr17 40638310 40638361 -54634290 + AT_rich Low_complexity Low_complexity 1 51 0 1 895 1384 51 0 0 chr17 40639021 40639196 -54633455 - L1Md_F2 LINE L1 -11 6571 6397 1 895 297 0 0 0 chr17 40639596 40639629 -54633022 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 895 3172 207 137 13 chr17 40639723 40640488 -54632163 + RMER13A LTR ERVK 1 860 0 1 895 252 121 0 0 chr17 40640531 40640564 -54632087 - L1_Mur2 LINE L1 -2363 3514 3482 1 895 185 24 22 67 chr17 40640580 40640625 -54632026 + (TTTTG)n Simple_repeat Simple_repeat 5 47 0 1 895 229 105 53 0 chr17 40640630 40640668 -54631983 - MusHAL1 LINE L1 -432 2280 2241 1 895 582 54 0 0 chr17 40640725 40640799 -54631852 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 895 1800 284 114 32 chr17 40640802 40641979 -54630672 - Lx6 LINE L1 -46 7414 5913 1 895 24372 77 164 1 chr17 40641982 40645819 -54626832 + L1Md_T LINE L1 1124 5585 -298 1 895 7957 52 5 1 chr17 40645820 40646809 -54625842 + L1Md_T LINE L1 5587 6579 -3 1 895 253 146 0 0 chr17 40646819 40646867 -54625784 - MYSERV16_I-int LTR ERVK -1182 1144 1097 1 895 1449 193 37 71 chr17 40646889 40647269 -54625382 - MYSERV16_I-int LTR ERVK -1393 933 567 1 895 389 179 0 0 chr17 40647271 40647338 -54625313 - MurSatRep1 Unknown Unknown -1128 1009 943 1 895 875 154 0 0 chr17 40647333 40647463 -54625188 - MurSatRep1 Unknown Unknown -1396 741 612 1 895 305 47 23 0 chr17 40647479 40647522 -54625129 + (GTTTG)n Simple_repeat Simple_repeat 2 45 0 1 895 884 285 117 34 chr17 40647523 40648188 -54624463 - Lx6 LINE L1 -709 6751 6021 1 895 350 337 114 57 chr17 40648208 40648286 -54624365 + MTE-int LTR MaLR 1197 1296 -284 1 895 884 35 0 17 chr17 40648286 40648403 -54624248 + (TTTC)n Simple_repeat Simple_repeat 2 116 0 1 895 350 337 114 57 chr17 40648403 40648463 -54624188 + MTE-int LTR MaLR 1297 1354 -226 1 895 687 65 0 27 chr17 40648463 40648574 -54624077 - L1Md_F2 LINE L1 -3 6579 6472 1 895 350 337 114 57 chr17 40648574 40648749 -54623902 + MTE-int LTR MaLR 1355 1528 -52 1 895 3110 196 20 38 chr17 40648814 40649551 -54623100 + RLTR22_Mur LTR ERVK 26 749 -1099 1 895 187 114 22 22 chr17 40649778 40649823 -54622828 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 1 895 295 277 32 32 chr17 40650027 40650150 -54622501 + RLTR22_Mur LTR ERVK 1689 1811 -37 1 895 321 281 74 52 chr17 40650771 40650851 -54621800 + L1MD3 LINE L1 7579 7652 -343 1 895 633 27 0 0 chr17 40650851 40650926 -54621725 + (CAGAA)n Simple_repeat Simple_repeat 1 75 0 1 895 321 281 74 52 chr17 40650926 40651074 -54621577 + L1MD3 LINE L1 7653 7811 -184 1 895 1483 79 10 0 chr17 40651602 40651805 -54620846 + L1_Mus1 LINE L1 6363 6567 0 1 895 21 0 0 0 chr17 40652772 40652793 -54619858 + AT_rich Low_complexity Low_complexity 1 21 0 1 895 746 244 325 4 chr17 40654104 40654208 -54618443 - Lx5 LINE L1 -11 7039 6850 1 895 3815 214 64 13 chr17 40654208 40655026 -54617625 - RMER13A LTR ERVK 0 860 2 1 895 2056 250 53 22 chr17 40655026 40655098 -54617553 - Lx5 LINE L1 -127 6849 6739 1 895 7109 63 5 0 chr17 40655098 40655987 -54616664 + RLTR13B1 LTR ERVK 1 893 0 1 895 2056 238 40 15 chr17 40655987 40656403 -54616248 - Lx5 LINE L1 -312 6738 6306 1 895 1103 165 78 28 chr17 40657030 40657248 -54615403 + Lx4A LINE L1 6829 7057 -1 1 895 447 19 0 0 chr17 40658974 40659026 -54613625 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 895 3946 218 16 29 chr17 40659109 40659980 -54612671 - RMER13A LTR ERVK 0 860 1 1 895 574 349 204 15 chr17 40660278 40660941 -54611710 - RMER1C Other Other -22 1320 533 2 895 27542 88 2 5 chr17 40661401 40665952 -54606699 - L1Md_F2 LINE L1 -10 6572 2037 2 895 241 118 0 0 chr17 40665951 40665985 -54606666 - L1VL1 LINE L1 -6371 51 18 2 895 207 0 0 0 chr17 40666023 40666046 -54606605 + (TA)n Simple_repeat Simple_repeat 1 23 0 2 895 521 76 0 12 chr17 40666780 40666860 -54605791 + (TA)n Simple_repeat Simple_repeat 1 79 0 2 895 26 74 0 0 chr17 40667629 40667683 -54604968 + AT_rich Low_complexity Low_complexity 1 54 0 2 895 268 205 24 49 chr17 40668071 40668153 -54604498 + Lx4B LINE L1 6672 6751 -307 2 895 671 256 71 12 chr17 40668153 40668379 -54604272 + RLTR26 LTR ERVK 1 251 -655 2 895 799 295 29 92 chr17 40668386 40668692 -54603959 + RMER13B LTR ERVK 613 899 -9 2 895 876 260 84 4 chr17 40668706 40668980 -54603671 + Lx5 LINE L1 6736 7031 -19 2 895 449 34 0 17 chr17 40668980 40669040 -54603611 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 2 895 2210 170 23 85 chr17 40669040 40670256 -54602395 + L1Md_F LINE L1 391 1481 -4402 2 895 1108 261 109 13 chr17 40670397 40670774 -54601877 + Lx5 LINE L1 6638 7050 0 2 895 29 0 0 0 chr17 40670781 40670810 -54601841 + AT_rich Low_complexity Low_complexity 1 29 0 2 895 195 42 0 0 chr17 40671354 40671378 -54601273 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 895 4416 93 3 54 chr17 40671381 40672066 -54600585 - L1_Mus2 LINE L1 0 6566 5917 2 895 216 0 0 0 chr17 40672068 40672092 -54600559 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 895 36326 52 1 3 chr17 40672092 40679201 -54593450 - L1Md_T LINE L1 -2 6583 1 2 895 23917 141 20 4 chr17 40679202 40683654 -54588997 - L1_Mus2 LINE L1 -634 5932 1406 2 895 4402 160 31 8 chr17 40683624 40683813 -54588838 - L1VL4 LINE L1 -5522 780 596 2 895 3638 118 65 24 chr17 40683813 40684394 -54588257 - RLTR1D LTR ERV1 0 605 1 2 895 4402 160 31 8 chr17 40684394 40684965 -54587686 - L1VL4 LINE L1 -5707 595 2 2 895 1665 228 52 10 chr17 40685755 40686159 -54586492 + MTC LTR MaLR 1 421 0 2 895 891 316 37 13 chr17 40687251 40687629 -54585022 - Lx9 LINE L1 -780 6864 6478 2 895 1362 97 0 5 chr17 40687978 40688164 -54584487 + B2_Mm2 SINE B2 2 186 -9 2 895 199 125 62 0 chr17 40688174 40688222 -54584429 + CT-rich Low_complexity Low_complexity 3 53 0 2 895 23 0 0 0 chr17 40690035 40690058 -54582593 + AT_rich Low_complexity Low_complexity 1 23 0 2 895 449 228 42 20 chr17 40690253 40690398 -54582253 + PB1D7 SINE Alu 3 149 0 2 895 198 205 0 43 chr17 40690435 40690481 -54582170 - L2a LINE L2 -82 3344 3301 2 895 363 300 51 77 chr17 40692319 40692453 -54580198 - RMER1C Other Other -5 1337 1210 2 895 322 51 68 0 chr17 40692453 40692512 -54580139 + (CAGAGA)n Simple_repeat Simple_repeat 4 66 0 2 895 993 62 0 0 chr17 40692512 40692640 -54580011 + (GGAA)n Simple_repeat Simple_repeat 4 132 0 2 895 363 300 51 77 chr17 40692640 40692778 -54579873 - RMER1C Other Other -133 1209 1072 2 895 317 348 36 30 chr17 40692841 40693159 -54579492 - RMER1C Other Other -463 879 628 2 895 393 39 0 0 chr17 40693977 40694028 -54578623 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 895 1269 102 5 2 chr17 40694573 40694773 -54577878 - ORR1A3 LTR MaLR 0 329 126 2 895 1378 236 59 9 chr17 40695126 40695464 -54577187 + MTC LTR MaLR 67 421 0 2 895 739 301 97 22 chr17 40696523 40696883 -54575768 - Lx9 LINE L1 -780 6864 6478 2 895 2154 178 39 2 chr17 40697651 40698063 -54574588 + Lx2B LINE L1 6574 7000 0 2 895 182 303 75 66 chr17 40699588 40699694 -54572957 - L3 LINE CR1 -941 3548 3442 2 895 229 244 183 0 chr17 40700121 40700203 -54572448 + MER33 DNA MER1_type 18 114 -210 2 895 438 20 0 0 chr17 40700727 40700778 -54571873 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 895 281 330 10 0 chr17 40700784 40700887 -54571764 - RMER1C Other Other -171 1171 1068 2 895 321 369 49 8 chr17 40700984 40701230 -54571421 - RMER1C Other Other -514 828 573 2 895 277 241 46 0 chr17 40701491 40701578 -54571073 - RMER1B Other Other -927 139 49 2 895 21 36 0 0 chr17 40701613 40701641 -54571010 + AT_rich Low_complexity Low_complexity 1 28 0 2 895 1313 148 0 18 chr17 40702335 40702562 -54570089 + L1_Mus4 LINE L1 6406 6628 -8 2 895 1970 134 13 3 chr17 40702831 40703146 -54569505 - ORR1A2 LTR MaLR 0 327 10 2 895 344 318 71 57 chr17 40703464 40703747 -54568904 - Lx8 LINE L1 -7 7466 7180 2 895 3564 96 50 0 chr17 40704092 40704591 -54568060 - Lx3_Mus LINE L1 0 7009 6486 2 895 278 286 64 23 chr17 40705761 40705933 -54566718 + L1_Mur3 LINE L1 3677 3855 -2288 2 895 714 318 26 22 chr17 40705966 40706194 -54566457 + MTE2b LTR MaLR 1 229 -150 2 895 234 91 0 0 chr17 40706216 40706249 -54566402 + (T)n Simple_repeat Simple_repeat 1 33 0 2 895 951 56 48 0 chr17 40706249 40706374 -54566277 - B1_Mm SINE Alu 0 147 17 2 895 24 32 0 0 chr17 40706408 40706439 -54566212 + AT_rich Low_complexity Low_complexity 1 31 0 2 895 198 143 0 0 chr17 40706581 40706616 -54566035 + (CATA)n Simple_repeat Simple_repeat 4 38 0 2 895 1104 77 14 0 chr17 40706640 40706783 -54565868 + B1_Mus2 SINE Alu 3 147 0 2 895 297 136 0 0 chr17 40706783 40706849 -54565802 + (A)n Simple_repeat Simple_repeat 1 66 0 2 895 553 231 47 13 chr17 40706940 40707089 -54565562 + Lx9 LINE L1 6912 7065 -579 2 895 376 306 66 24 chr17 40707119 40707330 -54565321 + L1MC LINE L1 5414 5633 -700 2 895 3064 271 57 39 chr17 40709311 40710364 -54562287 + L1_Mur3 LINE L1 21 1096 -6616 2 895 441 0 0 0 chr17 40710364 40710413 -54562238 + (GA)n Simple_repeat Simple_repeat 1 49 0 2 895 3064 271 57 39 chr17 40710413 40710496 -54562155 + L1_Mur3 LINE L1 1097 1178 -6534 2 895 792 251 6 6 chr17 40710508 40710688 -54561963 + ORR1C1 LTR MaLR 1 180 -198 2 895 237 254 0 17 chr17 40710726 40710786 -54561865 + RLTR11A2 LTR ERVK 1 59 -468 2 895 1048 190 17 34 chr17 40711813 40712047 -54560604 + Lx4A LINE L1 6829 7058 0 2 895 276 214 36 0 chr17 40712569 40712653 -54559998 + Lx9 LINE L1 7527 7613 -31 2 895 763 104 0 0 chr17 40714072 40714178 -54558473 - MT2B LTR ERVL -495 106 1 2 895 284 0 28 0 chr17 40714946 40714982 -54557669 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 2 895 225 65 0 0 chr17 40716533 40716564 -54556087 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 2 895 2925 98 2 5 chr17 40716595 40717017 -54555634 + BGLII LTR ERVK 1 421 0 2 895 343 325 33 0 chr17 40717023 40717174 -54555477 - Lx8 LINE L1 -179 7294 7139 2 895 2775 19 9 0 chr17 40717203 40717522 -54555129 + RLTRETN_Mm LTR ERVK 1 322 0 2 895 40109 22 2 3 chr17 40717522 40722371 -54550280 + MMETn-int LTR ERVK 1 4844 0 2 895 2806 19 0 0 chr17 40722371 40722693 -54549958 + RLTRETN_Mm LTR ERVK 1 322 0 2 895 294 312 88 0 chr17 40722713 40722838 -54549813 - L1MCa LINE L1 -5905 603 468 2 895 419 52 17 0 chr17 40723593 40723651 -54549000 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 895 237 191 303 0 chr17 40723700 40723789 -54548862 + Lx9 LINE L1 6912 7027 -617 2 895 369 58 0 0 chr17 40723789 40723841 -54548810 + (A)n Simple_repeat Simple_repeat 1 52 0 2 895 546 335 128 21 chr17 40723961 40724677 -54547974 + L1MC1 LINE L1 5471 6263 -70 2 895 291 54 0 0 chr17 40724845 40724882 -54547769 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 895 324 333 17 50 chr17 40725972 40726092 -54546559 - PB1D10 SINE Alu -1 116 1 2 895 2528 304 116 43 chr17 40726562 40727674 -54544977 - Lx6 LINE L1 -204 7256 6064 2 895 3194 195 40 49 chr17 40727998 40728958 -54543693 + RLTR22_Mur LTR ERVK 1 977 -831 2 895 942 55 0 0 chr17 40729048 40729175 -54543476 - L1_Mus4 LINE L1 -2 6564 6438 2 895 21 0 0 0 chr17 40730178 40730199 -54542452 + AT_rich Low_complexity Low_complexity 1 21 0 2 895 1537 127 25 0 chr17 40730740 40730985 -54541666 + L1_Mur2 LINE L1 3950 4200 -1677 2 895 3289 99 2 3 chr17 40730996 40731609 -54541042 - L1_Mus4 LINE L1 -618 6018 5410 2 895 1014 166 0 11 chr17 40731609 40731798 -54540853 + L1_Mur2 LINE L1 5177 5363 -514 2 895 1150 163 184 12 chr17 40731800 40732055 -54540596 - RLTR25A LTR ERVK -413 690 392 2 895 1378 140 125 4 chr17 40732055 40732327 -54540324 - RMER17B LTR ERVK 0 958 654 2 895 248 280 104 22 chr17 40732341 40732476 -54540175 + Lx9 LINE L1 6412 6557 -1087 2 895 291 130 0 0 chr17 40732847 40732901 -54539750 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 895 861 270 49 18 chr17 40732973 40733199 -54539452 + MTE2a LTR MaLR 1 233 -146 2 895 645 247 34 50 chr17 40733294 40733473 -54539178 + RMER1C Other Other 854 1029 -313 2 895 441 0 0 0 chr17 40733805 40733854 -54538797 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 895 426 299 118 51 chr17 40734449 40734823 -54537828 + L1MC3 LINE L1 7367 7765 -20 2 895 23 78 0 0 chr17 40736299 40736350 -54536301 + AT_rich Low_complexity Low_complexity 1 51 0 2 895 189 74 0 0 chr17 40737780 40737807 -54534844 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 2 895 393 348 62 41 chr17 40737808 40738051 -54534600 - RMER1C Other Other -24 1318 1071 2 895 508 332 99 41 chr17 40738096 40738492 -54534159 - RMER1C Other Other -502 840 162 2 895 426 338 52 36 chr17 40739892 40740141 -54532510 - Lx8 LINE L1 -12 7461 7209 2 895 329 377 47 40 chr17 40740144 40740420 -54532231 - L1MCa LINE L1 -5926 582 305 2 895 366 269 0 9 chr17 40741642 40741774 -54530877 + L1M2 LINE L1 3727 3857 -2283 2 895 588 265 126 6 chr17 40741778 40741960 -54530691 + MTE2b LTR MaLR 10 213 -166 2 895 447 184 0 0 chr17 40742006 40742093 -54530558 + (TA)n Simple_repeat Simple_repeat 2 88 0 2 895 397 174 11 21 chr17 40742684 40742778 -54529873 + (CATATA)n Simple_repeat Simple_repeat 4 96 0 2 895 28 0 0 0 chr17 40742786 40742814 -54529837 + AT_rich Low_complexity Low_complexity 1 28 0 2 895 22 0 0 0 chr17 40742867 40742889 -54529762 + AT_rich Low_complexity Low_complexity 1 22 0 2 895 2745 192 9 13 chr17 40743053 40743606 -54529045 - Lx4A LINE L1 -697 6361 5811 2 895 1587 178 75 9 chr17 40743606 40743951 -54528700 - RLTR9A LTR ERVK 0 368 1 3 895 256 59 0 0 chr17 40743951 40743985 -54528666 - Lx4B LINE L1 -1242 5816 5783 3 895 34952 77 3 13 chr17 40743991 40750218 -54522433 - L1Md_F2 LINE L1 0 6582 460 3 895 4390 151 12 9 chr17 40750207 40750965 -54521686 - Lx4B LINE L1 -82 5795 5036 3 895 1092 181 83 9 chr17 40751018 40751236 -54521415 - ORR1B1 LTR MaLR 0 394 161 3 895 307 326 63 30 chr17 40751242 40751637 -54521014 - L1M2 LINE L1 -850 5293 4886 3 895 222 37 0 0 chr17 40751637 40751664 -54520987 + (T)n Simple_repeat Simple_repeat 1 27 0 3 895 33760 76 4 1 chr17 40751685 40757844 -54514807 - L1Md_F2 LINE L1 -2 6580 400 3 895 1187 280 56 41 chr17 40758300 40758694 -54513957 + MTC LTR MaLR 20 419 -2 3 895 1022 317 32 8 chr17 40759657 40760035 -54512616 - Lx9 LINE L1 -780 6864 6478 3 895 1214 148 104 0 chr17 40760072 40760302 -54512349 + MusHAL1 LINE L1 1333 1586 -1126 3 895 533 125 12 0 chr17 40760318 40760398 -54512253 - IAPEY3-int LTR ERVK -4414 3266 3186 3 895 1552 57 0 0 chr17 40760390 40760584 -54512067 - IAPEY3-int LTR ERVK -2635 5045 4852 3 895 14930 104 17 14 chr17 40760577 40762736 -54509915 - IAPEY3-int LTR ERVK -4991 2689 524 3 895 715 160 49 43 chr17 40762735 40762898 -54509753 - IAPLTR4_I LTR ERVK -1290 180 17 3 895 2351 81 3 3 chr17 40762898 40763221 -54509430 - IAPEY2_LTR LTR ERVK -3 354 32 3 111 22106 63 0 0 chr17 40763231 40766152 -54506499 + L1Md_F3 LINE L1 1956 4876 -1007 3 896 7860 58 1 1 chr17 40766148 40767526 -54505125 - L1Md_F2 LINE L1 0 6582 5205 3 896 468 55 0 0 chr17 40767547 40767602 -54505049 + L1Md_F3 LINE L1 5532 5586 -297 3 896 7798 54 15 0 chr17 40767602 40768583 -54504068 + L1Md_F3 LINE L1 5587 6582 -2 3 896 229 195 0 0 chr17 40770725 40770766 -54501885 + MER33 DNA MER1_type 14 54 -270 3 896 283 253 33 11 chr17 40771131 40771223 -54501428 - RMER1C Other Other -27 1315 1222 3 896 781 157 7 7 chr17 40771258 40771412 -54501239 + A-rich Low_complexity Low_complexity 4 157 0 3 896 507 277 47 7 chr17 40771412 40771561 -54501090 - RMER1C Other Other -117 1225 1071 3 896 371 351 47 62 chr17 40771639 40772017 -54500634 - RMER1B Other Other -513 829 170 3 896 230 247 44 56 chr17 40773519 40773609 -54499042 - MLT1-int LTR MaLR -148 1223 1135 3 896 204 111 0 0 chr17 40773790 40773826 -54498825 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 3 896 959 312 40 13 chr17 40774314 40774691 -54497960 - Lx9 LINE L1 -780 6864 6478 3 896 4712 128 20 11 chr17 40774728 40775540 -54497111 + MusHAL1 LINE L1 1333 2151 -561 3 896 4369 179 23 59 chr17 40775537 40776264 -54496387 + L1_Mur1 LINE L1 3889 4585 -1301 3 896 554 41 0 14 chr17 40776264 40776338 -54496313 + (GGGAA)n Simple_repeat Simple_repeat 4 76 0 3 896 4369 179 23 59 chr17 40776338 40776638 -54496013 + L1_Mur1 LINE L1 4586 4879 -1007 3 896 370 77 45 15 chr17 40776638 40776704 -54495947 + (TTTTC)n Simple_repeat Simple_repeat 3 70 0 3 896 33318 76 5 14 chr17 40776798 40782926 -54489725 - L1Md_F2 LINE L1 -4 6578 511 3 896 6792 114 7 1 chr17 40782931 40784288 -54488363 - L1_Mus3 LINE L1 -1 6637 5273 3 896 21 0 0 0 chr17 40784403 40784424 -54488227 + AT_rich Low_complexity Low_complexity 1 21 0 3 896 1270 65 0 16 chr17 40784652 40784841 -54487810 + L1_Mm LINE L1 5255 5440 -443 3 896 5634 45 1 36 chr17 40784843 40785833 -54486818 - L1Md_A LINE L1 -4376 1507 560 3 896 973 217 73 9 chr17 40785882 40786101 -54486550 - ORR1B1 LTR MaLR 0 394 162 3 896 307 318 5 8 chr17 40786102 40786317 -54486334 - L1M2 LINE L1 -845 5298 5085 3 896 491 351 105 43 chr17 40786341 40786517 -54486134 - L1M2 LINE L1 -1085 5058 4885 3 896 486 0 0 0 chr17 40786517 40786571 -54486080 + (TA)n Simple_repeat Simple_repeat 1 54 0 3 896 491 336 137 43 chr17 40786571 40787306 -54485345 - L1M2 LINE L1 -1259 4887 4070 3 896 1058 299 56 45 chr17 40788120 40788516 -54484135 + MTC LTR MaLR 20 419 -2 3 896 880 307 37 11 chr17 40789472 40789847 -54482804 - Lx9 LINE L1 -782 6862 6478 3 896 4532 183 303 72 chr17 40789898 40791456 -54481195 + L1_Mur2 LINE L1 2549 4594 -1283 3 896 1248 91 0 0 chr17 40791456 40791632 -54481019 + (GGGAA)n Simple_repeat Simple_repeat 2 177 0 3 896 4532 183 303 72 chr17 40791632 40791955 -54480696 + L1_Mur2 LINE L1 4595 4864 -1013 3 896 285 29 0 0 chr17 40791955 40791989 -54480662 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 3 896 669 115 39 0 chr17 40791997 40792127 -54480524 + CT-rich Low_complexity Low_complexity 2 136 0 3 896 30 45 0 0 chr17 40792167 40792211 -54480440 + AT_rich Low_complexity Low_complexity 1 44 0 3 896 351 113 0 0 chr17 40792212 40792265 -54480386 + (TTTC)n Simple_repeat Simple_repeat 2 54 0 3 896 6983 80 28 2 chr17 40792317 40793593 -54479058 - L1_Mus1 LINE L1 0 6567 5289 3 896 1917 70 0 15 chr17 40793606 40793867 -54478784 - L1Md_F3 LINE L1 -15 6569 6313 3 896 6817 126 4 3 chr17 40793896 40795014 -54477637 + L1_Mm LINE L1 4136 5254 -629 3 896 672 224 115 23 chr17 40795014 40795188 -54477463 - ORR1B1 LTR MaLR -43 351 162 3 896 471 332 84 30 chr17 40795194 40796197 -54476454 - L1_Mur3 LINE L1 -849 5294 4226 3 896 1008 117 7 0 chr17 40796208 40796353 -54476298 + B1_Mus1 SINE Alu 3 148 0 3 896 312 353 82 0 chr17 40796404 40796574 -54476077 - L1_Mur3 LINE L1 -1893 4250 4067 3 896 1222 269 61 46 chr17 40797367 40797761 -54474890 + MTC LTR MaLR 20 419 -2 3 896 222 37 0 0 chr17 40799222 40799249 -54473402 + (T)n Simple_repeat Simple_repeat 1 27 0 3 896 2328 79 49 17 chr17 40799249 40799596 -54473055 - RLTR45 LTR ERVK -124 358 1 3 896 30324 38 6 16 chr17 40799596 40803503 -54469148 - RLTR45-int LTR ERVK 0 7244 3380 3 896 20260 46 14 8 chr17 40803481 40806093 -54466558 - RLTR45-int LTR ERVK -4039 3205 578 3 896 2313 64 70 3 chr17 40806090 40806420 -54466231 - RLTR45-int LTR ERVK -6892 352 1 3 896 806 62 36 0 chr17 40806420 40806532 -54466119 - RLTR45 LTR ERVK 0 482 367 3 896 273 89 0 0 chr17 40806884 40806929 -54465722 + (A)n Simple_repeat Simple_repeat 1 45 0 3 896 817 305 45 20 chr17 40807426 40807784 -54464867 - Lx9 LINE L1 -780 6864 6498 3 896 5040 174 306 57 chr17 40807836 40809712 -54462939 + L1_Mur1 LINE L1 2536 4879 -1007 3 896 468 91 0 0 chr17 40809714 40809780 -54462871 + (TTTTC)n Simple_repeat Simple_repeat 5 70 0 3 896 448 192 0 0 chr17 40809780 40809858 -54462793 + CT-rich Low_complexity Low_complexity 2 79 0 3 896 6875 115 6 1 chr17 40809905 40811259 -54461392 - L1_Mus3 LINE L1 -1 6637 5276 3 896 2507 52 6 3 chr17 40811626 40811957 -54460694 + L1Md_F2 LINE L1 5255 5586 -297 3 896 7820 55 7 0 chr17 40811957 40812944 -54459707 + L1Md_F2 LINE L1 5587 6580 -2 3 896 6303 84 3 2 chr17 40813476 40815215 -54457436 + L1Md_F2 LINE L1 360 2100 -3783 3 896 9257 74 0 8 chr17 40815216 40816520 -54456131 + L1Md_F2 LINE L1 4293 5586 -297 3 896 7825 63 1 1 chr17 40816520 40817516 -54455135 + L1Md_F2 LINE L1 5587 6582 0 3 896 1006 73 0 0 chr17 40817516 40817652 -54454999 + L1Md_F2 LINE L1 5451 5586 -297 3 896 6904 65 74 2 chr17 40817652 40818581 -54454070 + L1Md_F2 LINE L1 5587 6582 0 3 896 995 81 0 0 chr17 40818581 40818717 -54453934 + L1Md_F2 LINE L1 5451 5586 -297 3 896 6993 58 79 1 chr17 40818717 40819641 -54453010 + L1Md_F2 LINE L1 5587 6582 0 3 896 3456 25 2 0 chr17 40819906 40820301 -54452350 + MTA_Mm LTR MaLR 1 396 0 3 896 2992 56 0 10 chr17 40820301 40820696 -54451955 + MTA_Mm-int LTR MaLR 1 391 -707 3 896 19718 82 2 23 chr17 40820696 40824354 -54448297 + L1Md_F2 LINE L1 454 4032 -1851 3 896 3878 60 2 0 chr17 40824348 40824860 -54447791 + L1Md_F2 LINE L1 5074 5586 -297 3 896 7946 48 6 3 chr17 40824860 40825851 -54446800 + L1Md_F2 LINE L1 5587 6580 -2 3 896 5807 41 4 0 chr17 40825851 40826582 -54446069 + MTA_Mm-int LTR MaLR 365 1098 0 3 896 3460 33 0 0 chr17 40826582 40826978 -54445673 + MTA_Mm LTR MaLR 1 396 0 3 896 39478 7 0 1 chr17 40827744 40834700 -54437951 - L1Md_A LINE L1 0 6582 1 3 896 229 195 0 0 chr17 40835274 40835315 -54437336 + MER33 DNA MER1_type 14 54 -270 3 896 317 351 26 87 chr17 40835685 40835997 -54436654 - RMER1C Other Other -559 783 491 3 896 35129 45 6 6 chr17 40836990 40842118 -54430533 + L1Md_T LINE L1 362 5588 -298 3 896 8466 32 0 0 chr17 40842119 40843115 -54429536 + L1Md_T LINE L1 5590 6585 0 3 896 276 30 0 0 chr17 40843907 40843940 -54428711 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 896 1032 305 35 8 chr17 40844433 40844810 -54427841 - Lx9 LINE L1 -780 6864 6478 3 896 4787 160 158 47 chr17 40844826 40846495 -54426156 + L1_Mur1 LINE L1 2526 4600 -1286 3 896 1074 144 0 0 chr17 40846495 40846675 -54425976 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 3 896 4764 185 297 87 chr17 40846675 40846947 -54425704 + L1_Mur1 LINE L1 4601 4871 -1015 3 896 699 113 7 22 chr17 40846958 40847094 -54425557 + (TTTTC)n Simple_repeat Simple_repeat 2 135 0 3 896 7414 104 8 1 chr17 40847152 40848501 -54424150 - L1_Mus3 LINE L1 0 6638 5276 3 896 4949 163 9 7 chr17 40850920 40852324 -54420327 - Lx4A LINE L1 -613 6445 5036 3 896 1095 202 68 9 chr17 40852375 40852595 -54420056 - ORR1B1 LTR MaLR 0 394 162 3 896 360 346 68 37 chr17 40852595 40853443 -54419208 - L1M2 LINE L1 -839 5304 4430 3 896 1007 49 7 14 chr17 40854671 40854817 -54417834 + L1Md_F2 LINE L1 6438 6582 0 3 896 1471 248 50 21 chr17 40854931 40855314 -54417337 + MTC LTR MaLR 28 421 0 3 896 259 305 85 8 chr17 40855418 40855547 -54417104 - MLT2B3 LTR ERVL -415 139 1 3 896 640 279 53 5 chr17 40856251 40856460 -54416191 - Lx9 LINE L1 -780 6864 6646 3 896 2591 49 12 0 chr17 40856464 40856791 -54415860 - IAPEY_LTR LTR ERVK 0 385 55 3 896 431 344 25 0 chr17 40856800 40856957 -54415694 - Lx9 LINE L1 -1006 6638 6478 3 896 1113 149 25 0 chr17 40856996 40857197 -54415454 + MusHAL1 LINE L1 1333 1538 -1174 3 896 8455 185 20 11 chr17 40857194 40858820 -54413831 + L1_Mus4 LINE L1 4191 5841 -42 3 896 1550 23 0 0 chr17 40858820 40858997 -54413654 + B2_Mm1t SINE B2 2 178 -15 3 896 276 30 0 0 chr17 40858997 40859030 -54413621 + (GAAAA)n Simple_repeat Simple_repeat 3 35 0 3 896 8455 98 7 34 chr17 40859030 40859490 -54413161 + L1_Mus4 LINE L1 5842 6280 -356 3 896 4032 80 9 40 chr17 40859992 40860575 -54412076 + L1_Mus2 LINE L1 6002 6566 0 3 896 5462 169 74 13 chr17 40860764 40861417 -54411234 - Lx4A LINE L1 -208 6850 6163 3 896 591 15 0 0 chr17 40861417 40861485 -54411166 + (CA)n Simple_repeat Simple_repeat 1 68 0 3 896 5462 169 74 13 chr17 40861485 40861904 -54410747 - Lx4A LINE L1 -896 6162 5713 3 896 23 0 0 0 chr17 40864947 40864970 -54407681 + AT_rich Low_complexity Low_complexity 1 23 0 3 896 227 316 147 0 chr17 40866014 40866109 -54406542 + MER33 DNA MER1_type 6 114 -210 3 896 614 258 79 46 chr17 40866439 40866679 -54405972 - RMER1C Other Other -24 1318 1071 3 896 347 333 72 54 chr17 40866732 40867049 -54405602 - RMER1C Other Other -495 847 620 3 896 4305 94 113 109 chr17 40868793 40869679 -54402972 - RMER17D LTR ERVK 0 889 1 3 896 384 331 53 24 chr17 40869706 40869876 -54402775 - Lx8 LINE L1 -199 7274 7100 3 896 337 271 81 27 chr17 40869906 40870054 -54402597 - L1MCa LINE L1 -5920 588 433 3 896 1018 140 61 6 chr17 40870141 40870321 -54402330 + B2_Mm2 SINE B2 2 191 -4 3 896 270 333 68 64 chr17 40871261 40871495 -54401156 + Lx8 LINE L1 7177 7411 -62 3 896 714 274 43 5 chr17 40871721 40871908 -54400743 + MTE2b LTR MaLR 20 213 -166 3 896 7600 173 20 3 chr17 40872181 40874090 -54398561 - Lx4A LINE L1 -38 7020 5081 3 896 2092 53 127 0 chr17 40874091 40874345 -54398306 + MTB LTR MaLR 1 282 -64 3 896 369 0 0 0 chr17 40874345 40874386 -54398265 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 896 2092 53 127 0 chr17 40874386 40874431 -54398220 + MTB LTR MaLR 283 336 -10 3 896 7111 89 18 69 chr17 40874439 40875594 -54397057 + MTB-int LTR MaLR 3 1098 0 3 896 2866 79 13 8 chr17 40875594 40875990 -54396661 + MTB LTR MaLR 1 398 -2 3 896 335 106 0 0 chr17 40875990 40876037 -54396614 - Lx4A LINE L1 -795 5082 5036 3 896 1156 211 17 9 chr17 40876089 40876319 -54396332 - ORR1B1 LTR MaLR -1 393 162 4 896 880 333 87 35 chr17 40876322 40877492 -54395159 - L1_Mur3 LINE L1 -614 5266 4036 4 896 889 325 68 11 chr17 40878986 40879356 -54393295 - Lx9 LINE L1 -776 6868 6478 4 896 16682 139 32 12 chr17 40879589 40881875 -54390776 + L1VL4 LINE L1 538 2866 -3017 4 896 231 36 0 0 chr17 40881875 40881903 -54390748 + (GAAA)n Simple_repeat Simple_repeat 3 30 0 4 896 16682 148 32 5 chr17 40881903 40883295 -54389356 + L1VL4 LINE L1 2867 4316 -1567 4 896 453 143 0 0 chr17 40883261 40883331 -54389320 - L1Md_F LINE L1 -5822 697 628 4 896 413 295 19 0 chr17 40883310 40883466 -54389185 - L1Md_F LINE L1 -5783 736 578 4 896 1613 47 0 0 chr17 40883558 40883750 -54388901 - B2_Mm1a SINE B2 0 193 2 4 896 411 220 31 170 chr17 40883770 40883929 -54388722 - L1VL1 LINE L1 -6072 350 214 4 896 2965 148 53 13 chr17 40884656 40885184 -54387467 + RLTR12A LTR ERVK 20 568 0 4 896 21329 28 1 2 chr17 40885564 40888141 -54384510 + L1Md_A LINE L1 3014 5586 -297 4 896 8635 20 1 0 chr17 40888141 40889136 -54383515 + L1Md_A LINE L1 5587 6582 0 4 896 2437 47 0 3 chr17 40889143 40889443 -54383208 + L1Md_F2 LINE L1 5288 5586 -297 4 896 7814 45 1 28 chr17 40889443 40890454 -54382197 + L1Md_F2 LINE L1 5587 6570 -12 4 896 1467 122 33 126 chr17 40890726 40891027 -54381624 + MT2A LTR ERVL 1 273 -260 4 896 5164 33 6 9 chr17 40891051 40891685 -54380966 - L1Md_F3 LINE L1 -1 6583 5952 4 13 36403 30 4 11 chr17 40891726 40896944 -54375707 + L1Md_T LINE L1 414 5586 -297 4 897 8932 6 0 1 chr17 40896944 40897941 -54374710 + L1Md_T LINE L1 5587 6582 0 4 897 4062 15 0 0 chr17 40897955 40898420 -54374231 + L1Md_A LINE L1 5122 5586 -297 4 897 8340 33 1 0 chr17 40898422 40899413 -54373238 + L1Md_A LINE L1 5589 6580 -2 4 897 542 256 12 5 chr17 40899446 40899600 -54373051 + MT2A LTR ERVL 347 554 -47 4 897 432 336 31 0 chr17 40899923 40900146 -54372505 - L1MD LINE L1 -2481 3665 3436 4 897 248 290 144 31 chr17 40902564 40902724 -54369927 - MER3 DNA MER1_type -8 201 24 4 897 664 302 15 63 chr17 40903712 40903917 -54368734 - B3A SINE B2 -3 195 1 4 897 410 292 42 24 chr17 40904509 40904747 -54367904 - MTD LTR MaLR -2 417 52 4 897 15763 171 52 24 chr17 40905682 40907808 -54364843 + L1VL4 LINE L1 574 2815 -3068 4 897 480 18 0 0 chr17 40907808 40907865 -54364786 + (GAAA)n Simple_repeat Simple_repeat 1 57 0 4 897 15763 166 73 13 chr17 40907865 40908523 -54364128 + L1VL4 LINE L1 2816 3482 -2401 4 897 549 0 0 0 chr17 40908523 40908584 -54364067 + (CAAAA)n Simple_repeat Simple_repeat 2 62 0 4 897 15763 166 73 13 chr17 40908584 40909786 -54362865 + L1VL4 LINE L1 3483 4724 -1159 4 897 2347 119 0 3 chr17 40909788 40910141 -54362510 + L1_Mus4 LINE L1 5758 6109 -527 4 897 13040 124 19 3 chr17 40910138 40912256 -54360395 + L1_Mm LINE L1 2799 4950 -933 4 897 3349 39 2 2 chr17 40912259 40912672 -54359979 + L1Md_F3 LINE L1 6158 6570 -14 4 897 5767 68 36 3 chr17 40912670 40913442 -54359209 + L1Md_F2 LINE L1 5784 6581 -1 4 897 854 122 7 0 chr17 40913695 40913834 -54358817 + (GAAA)n Simple_repeat Simple_repeat 4 143 0 4 897 20283 179 50 30 chr17 40913841 40917802 -54354849 + Lx2B LINE L1 1256 5289 -597 4 897 1178 134 73 9 chr17 40917802 40917903 -54354748 + Lx LINE L1 6419 6518 -136 4 897 222 37 0 0 chr17 40917903 40917930 -54354721 + (TGGG)n Simple_repeat Simple_repeat 3 29 0 4 897 1178 134 73 9 chr17 40917930 40918046 -54354605 + Lx LINE L1 6519 6649 -5 4 897 20283 199 55 22 chr17 40918046 40919705 -54352946 + Lx2B LINE L1 5290 6990 -10 4 897 282 56 0 0 chr17 40921265 40921301 -54351350 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 897 1139 215 4 29 chr17 40921538 40921782 -54350869 - ORR1A4 LTR MaLR 0 329 92 4 897 203 137 38 38 chr17 40922150 40922203 -54350448 + (TTAA)n Simple_repeat Simple_repeat 1 53 0 4 897 1806 279 167 35 chr17 40923526 40924146 -54348505 + Lx7 LINE L1 6538 7240 -456 4 897 1950 87 11 0 chr17 40924146 40924411 -54348240 - L1_Mus2 LINE L1 0 6566 6299 4 897 1806 278 29 42 chr17 40924411 40924536 -54348115 + Lx7 LINE L1 7241 7363 -333 4 897 29 28 0 0 chr17 40924715 40924751 -54347900 + AT_rich Low_complexity Low_complexity 1 36 0 4 897 416 370 26 44 chr17 40926792 40927021 -54345630 + MLT1D LTR MaLR 1 225 -280 4 897 246 345 18 9 chr17 40927090 40927201 -54345450 + MLT1D LTR MaLR 356 467 0 4 897 246 32 0 0 chr17 40927626 40927657 -54344994 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 897 21 0 0 0 chr17 40929263 40929284 -54343367 + AT_rich Low_complexity Low_complexity 1 21 0 4 897 198 0 0 0 chr17 40929627 40929649 -54343002 + (A)n Simple_repeat Simple_repeat 1 22 0 4 897 225 0 0 0 chr17 40931466 40931491 -54341160 + (A)n Simple_repeat Simple_repeat 1 25 0 4 897 180 0 0 0 chr17 40931527 40931547 -54341104 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 4 897 1003 176 96 14 chr17 40932301 40932509 -54340142 - URR1A DNA MER1_type 0 226 2 4 897 35323 36 0 0 chr17 40932876 40938119 -54334532 + L1Md_T LINE L1 250 5589 -297 4 897 8975 5 0 0 chr17 40938119 40939115 -54333536 + L1Md_T LINE L1 5590 6585 0 4 897 23 68 0 0 chr17 40939231 40939275 -54333376 + AT_rich Low_complexity Low_complexity 1 44 0 4 897 1211 57 0 12 chr17 40939287 40939447 -54333204 + B2_Mm2 SINE B2 1 158 -37 4 897 623 13 13 0 chr17 40939448 40939524 -54333127 + (TAGA)n Simple_repeat Simple_repeat 2 78 0 4 897 296 248 9 9 chr17 40939552 40939662 -54332989 + Lx7 LINE L1 7369 7478 -218 4 897 306 0 0 0 chr17 40939665 40939699 -54332952 + (TTTG)n Simple_repeat Simple_repeat 4 37 0 4 897 214 288 15 0 chr17 40939713 40939779 -54332872 + T-rich Low_complexity Low_complexity 4 70 0 4 897 21 0 0 0 chr17 40940008 40940029 -54332622 + AT_rich Low_complexity Low_complexity 1 21 0 4 897 245 322 42 42 chr17 40940404 40940524 -54332127 + B1F1 SINE Alu 1 120 0 4 897 544 262 9 0 chr17 40940695 40940802 -54331849 + Lx8 LINE L1 6583 6690 -783 4 897 2005 64 168 0 chr17 40942055 40942352 -54330299 - L1_Mus3 LINE L1 -1 6637 6291 4 897 415 285 23 2 chr17 40942504 40942698 -54329953 - Lx9 LINE L1 -15 5832 5635 4 897 553 290 56 28 chr17 40942707 40942920 -54329731 - ID_B1 SINE B4 0 224 6 4 897 274 362 43 56 chr17 40943062 40943223 -54329428 + ID_B1 SINE B4 6 164 -60 4 897 290 265 48 12 chr17 40943153 40943237 -54329414 + PB1 SINE Alu 21 107 -20 4 897 395 332 57 52 chr17 40944053 40944301 -54328350 + L1MD3 LINE L1 7448 7696 -299 4 897 236 261 119 67 chr17 40944553 40944746 -54327905 + L1MC4a LINE L1 7651 7853 -29 4 897 200 200 0 0 chr17 40945588 40945628 -54327023 + (TTGG)n Simple_repeat Simple_repeat 2 41 0 4 897 246 206 28 56 chr17 40945668 40945740 -54326911 - Lx7 LINE L1 -21 7675 7606 4 897 1289 268 55 49 chr17 40945850 40946301 -54326350 - Lx7 LINE L1 -329 7367 6914 4 897 231 88 0 0 chr17 40946370 40946404 -54326247 + (A)n Simple_repeat Simple_repeat 1 34 0 4 897 1012 218 202 55 chr17 40946750 40947076 -54325575 + ORR1D1 LTR MaLR 1 374 0 4 897 22 0 0 0 chr17 40947670 40947692 -54324959 + AT_rich Low_complexity Low_complexity 1 22 0 4 897 23 0 0 0 chr17 40949802 40949825 -54322826 + AT_rich Low_complexity Low_complexity 1 23 0 4 897 1147 81 0 0 chr17 40950040 40950188 -54322463 - B1_Mus1 SINE Alu 0 148 1 4 897 334 231 27 27 chr17 40950189 40950300 -54322351 + L1MA9 LINE L1 6097 6207 -105 4 897 42 36 0 0 chr17 40950439 40950495 -54322156 + AT_rich Low_complexity Low_complexity 1 56 0 4 897 180 333 25 106 chr17 40950501 40950632 -54322019 - L2a LINE L2 -15 3411 3287 4 897 441 0 0 0 chr17 40950632 40950681 -54321970 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 897 180 333 25 106 chr17 40950681 40950710 -54321941 - L2a LINE L2 -140 3286 3265 4 897 759 335 60 73 chr17 40951526 40952206 -54320445 - Charlie1a DNA MER1_type -521 934 264 4 897 246 359 78 0 chr17 40952225 40952353 -54320298 - Charlie1a DNA MER1_type -1265 190 53 4 897 647 25 12 0 chr17 40952377 40952458 -54320193 + (TCTA)n Simple_repeat Simple_repeat 3 84 0 4 897 485 298 86 7 chr17 40952791 40952943 -54319708 + RSINE1 SINE B4 2 165 0 4 897 1021 16 16 0 chr17 40952964 40953091 -54319560 + (TAGA)n Simple_repeat Simple_repeat 3 131 0 4 897 352 300 50 14 chr17 40953167 40953387 -54319264 + L1MC4 LINE L1 7158 7385 -657 4 897 408 226 20 0 chr17 40953976 40954078 -54318573 + Lx6 LINE L1 7185 7288 -172 4 897 5004 113 57 1 chr17 40954079 40954840 -54317811 - L1_Mus4 LINE L1 -7 6629 5827 4 897 8084 106 9 2 chr17 40954840 40956837 -54315814 - L1_Mus2 LINE L1 0 6566 4556 4 897 225 292 32 43 chr17 40956921 40957014 -54315637 + Lx7 LINE L1 7205 7296 -400 4 897 462 18 0 0 chr17 40957031 40957086 -54315565 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 897 202 159 45 45 chr17 40957268 40957334 -54315317 + A-rich Low_complexity Low_complexity 2 67 0 4 897 495 0 0 0 chr17 40957407 40957462 -54315189 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 897 492 228 17 26 chr17 40957464 40957581 -54315070 - RLTR40 LTR ERVK -238 579 464 4 897 1379 236 107 20 chr17 40957589 40957764 -54314887 - ORR1C2 LTR MaLR -8 376 181 4 897 696 24 0 0 chr17 40957764 40957846 -54314805 + (GA)n Simple_repeat Simple_repeat 1 82 0 4 897 1379 236 107 20 chr17 40957846 40957868 -54314783 - ORR1C2 LTR MaLR -204 180 165 4 897 1251 91 42 11 chr17 40957868 40958057 -54314594 - B2_Mm2 SINE B2 0 195 1 4 897 1379 236 107 20 chr17 40958057 40958204 -54314447 - ORR1C2 LTR MaLR -220 164 2 4 897 1017 260 85 48 chr17 40958234 40958372 -54314279 - RLTR40 LTR ERVK -372 445 297 4 897 279 93 0 0 chr17 40958372 40958415 -54314236 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 897 1017 260 85 48 chr17 40958415 40958441 -54314210 - RLTR40 LTR ERVK -521 296 270 4 897 1142 176 150 25 chr17 40958441 40958727 -54313924 - RLTRETN_Mm LTR ERVK 0 322 1 4 897 1017 260 85 48 chr17 40958727 40958973 -54313678 - RLTR40 LTR ERVK -548 269 20 4 897 8345 34 4 4 chr17 40959013 40960061 -54312590 - L1Md_F2 LINE L1 -1 6581 5534 4 897 292 326 121 13 chr17 40960551 40960700 -54311951 - MER20 DNA MER1_type -53 166 2 4 897 254 104 19 0 chr17 40961312 40961369 -54311282 + Lx2B LINE L1 6945 7003 -5 4 897 974 303 105 27 chr17 40961398 40961808 -54310843 + Lx8 LINE L1 6934 7375 -98 4 897 183 100 0 0 chr17 40962113 40962143 -54310508 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 4 897 22 0 0 0 chr17 40962452 40962474 -54310177 + AT_rich Low_complexity Low_complexity 1 22 0 4 897 1223 93 48 27 chr17 40963094 40963282 -54309369 - B2_Mm2 SINE B2 -1 194 3 4 897 993 55 0 0 chr17 40963409 40963537 -54309114 + (TC)n Simple_repeat Simple_repeat 2 129 0 4 897 21 71 0 0 chr17 40963558 40963600 -54309051 + AT_rich Low_complexity Low_complexity 1 42 0 4 897 1309 51 0 0 chr17 40963772 40963930 -54308721 - L1Md_F2 LINE L1 -439 6143 5986 4 897 3279 70 23 0 chr17 40963930 40964361 -54308290 + L1Md_F2 LINE L1 6131 6571 -11 4 897 326 275 64 72 chr17 40964463 40964621 -54308030 - MIRb SINE MIR -64 204 20 4 897 1301 209 111 16 chr17 40964879 40965195 -54307456 - MTD LTR MaLR -59 360 15 5 897 288 262 243 37 chr17 40965512 40965619 -54307032 + MLT1A0 LTR MaLR 11 139 -226 5 897 247 321 0 12 chr17 40966668 40966753 -54305898 - MLT1A1 LTR MaLR -297 111 28 5 897 378 282 0 0 chr17 40968977 40969062 -54303589 + Lx8 LINE L1 7243 7327 -146 5 897 1006 102 0 42 chr17 40969307 40969450 -54303201 - B1_Mus1 SINE Alu -10 138 2 5 897 671 278 24 28 chr17 40969745 40969956 -54302695 - B3 SINE B2 -6 210 1 5 897 441 81 0 0 chr17 40970192 40970254 -54302397 + (TG)n Simple_repeat Simple_repeat 2 63 0 5 897 1059 112 50 0 chr17 40970935 40971096 -54301555 + B2_Mm2 SINE B2 1 169 -26 5 897 21 0 0 0 chr17 40971097 40971118 -54301533 + AT_rich Low_complexity Low_complexity 1 21 0 5 897 448 264 30 61 chr17 40972081 40972246 -54300405 - RSINE1 SINE B4 -3 162 3 5 897 1126 148 94 5 chr17 40972276 40972479 -54300172 + URR1A DNA MER1_type 5 225 -1 5 897 793 123 14 0 chr17 40973876 40974014 -54298637 + (TC)n Simple_repeat Simple_repeat 1 140 0 5 897 633 238 42 7 chr17 40974439 40974561 -54298090 + B1_Mur2 SINE Alu 1 127 -22 5 897 726 0 32 0 chr17 40974561 40974655 -54297996 + (GA)n Simple_repeat Simple_repeat 2 98 0 5 897 633 238 42 7 chr17 40974655 40974676 -54297975 + B1_Mur2 SINE Alu 128 148 -1 5 897 324 210 24 12 chr17 40974676 40974758 -54297893 + GA-rich Low_complexity Low_complexity 2 84 0 5 897 1286 69 9 0 chr17 40974758 40975193 -54297458 + (GGAA)n Simple_repeat Simple_repeat 1 439 0 5 897 645 250 49 0 chr17 40975886 40976030 -54296621 + B3A SINE B2 2 152 -46 5 897 267 31 0 0 chr17 40976045 40976077 -54296574 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 897 28 48 0 0 chr17 40976077 40976119 -54296532 + AT_rich Low_complexity Low_complexity 1 42 0 5 897 1081 85 0 0 chr17 40977329 40977470 -54295181 + B1_Mus1 SINE Alu 1 141 -7 5 897 22 56 0 0 chr17 40977663 40977699 -54294952 + AT_rich Low_complexity Low_complexity 1 36 0 5 897 256 314 28 37 chr17 40979365 40979474 -54293177 + PB1D10 SINE Alu 1 108 -9 5 897 453 327 31 44 chr17 40979787 40979947 -54292704 - RSINE1 SINE B4 -6 159 2 5 897 291 283 75 46 chr17 40979947 40980121 -54292530 - L1MC4 LINE L1 -403 7639 7461 5 897 953 293 83 8 chr17 40980284 40980549 -54292102 + B4 SINE B4 3 287 -5 5 897 319 300 88 5 chr17 40980880 40981087 -54291564 - L1MC4 LINE L1 -1180 6862 6616 5 897 617 86 11 0 chr17 40981784 40981877 -54290774 + (GGAA)n Simple_repeat Simple_repeat 3 96 0 5 897 566 67 133 0 chr17 40981906 40981996 -54290655 + B1_Mus2 SINE Alu 45 146 -1 5 897 461 281 111 29 chr17 40982420 40982592 -54290059 + MTD LTR MaLR 14 199 -220 5 897 194 376 99 0 chr17 40982626 40982727 -54289924 - MIR SINE MIR -147 115 5 5 897 215 302 0 0 chr17 40983398 40983451 -54289200 + MIRm SINE MIR 93 145 -131 5 897 773 191 0 47 chr17 40984137 40984285 -54288366 + B1_Mur1 SINE Alu 1 141 -8 5 897 385 283 0 11 chr17 40984808 40984901 -54287750 + PB1D10 SINE Alu 11 102 -15 5 897 269 264 14 0 chr17 40984976 40985048 -54287603 + L1M2 LINE L1 5712 5784 -507 5 897 250 282 63 13 chr17 40985082 40985161 -54287490 + RSINE1 SINE B4 47 129 -36 5 897 351 0 0 0 chr17 40985166 40985205 -54287446 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 897 286 159 0 28 chr17 40985261 40985332 -54287319 + GA-rich Low_complexity Low_complexity 4 72 0 5 897 563 46 0 0 chr17 40986930 40986995 -54285656 + L1Md_F2 LINE L1 5522 5586 -297 5 897 7935 54 2 0 chr17 40986996 40987989 -54284662 + L1Md_F2 LINE L1 5588 6582 0 5 897 450 0 0 0 chr17 40988072 40988122 -54284529 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 897 1278 91 11 0 chr17 40988280 40988455 -54284196 + B2_Mm1a SINE B2 1 177 -16 5 897 8213 41 1 2 chr17 40988456 40989690 -54282961 - L1Md_F2 LINE L1 0 6582 5352 5 897 4218 75 0 0 chr17 40989711 40990261 -54282390 + L1_Mm LINE L1 4814 5363 -520 5 897 755 315 216 19 chr17 40990272 40990746 -54281905 - MER67C LTR ERV1 -76 635 69 5 897 3031 67 9 12 chr17 40991166 40991588 -54281063 - BGLII LTR ERVK 0 421 1 5 897 189 94 0 0 chr17 40991598 40991630 -54281021 + (A)n Simple_repeat Simple_repeat 1 32 0 5 897 358 211 7 36 chr17 40991760 40991898 -54280753 + CT-rich Low_complexity Low_complexity 1 134 0 5 897 31 0 0 0 chr17 40991919 40991950 -54280701 + AT_rich Low_complexity Low_complexity 1 31 0 5 897 222 62 0 0 chr17 40992615 40992647 -54280004 + (T)n Simple_repeat Simple_repeat 1 32 0 5 897 1039 198 69 183 chr17 40993097 40993517 -54279134 + ORR1D1 LTR MaLR 2 373 -1 5 897 643 226 18 2 chr17 40993517 40993646 -54279005 + B1_Mur1 SINE Alu 10 139 -10 5 897 303 28 0 0 chr17 40993646 40993682 -54278969 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 5 897 245 324 32 101 chr17 40993925 40994083 -54278568 - B1F SINE Alu -2 147 1 5 897 2302 66 7 3 chr17 40994440 40994746 -54277905 + L1_Mus2 LINE L1 6260 6566 0 5 897 1646 131 97 7 chr17 40995337 40995637 -54277014 + IAPEY3_LTR LTR ERVK 1 327 -5 5 897 816 286 10 0 chr17 40995723 40995919 -54276732 + B3 SINE B2 1 198 -18 5 897 360 0 0 0 chr17 40996634 40996674 -54275977 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 5 897 1145 62 7 0 chr17 40996680 40996825 -54275826 - B1_Mus1 SINE Alu 0 148 3 5 897 662 305 36 0 chr17 40997399 40997566 -54275085 + B3A SINE B2 4 176 -22 5 897 225 316 0 0 chr17 40997571 40997628 -54275023 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 897 379 273 6 78 chr17 40997722 40997754 -54274897 + ID_B1 SINE B4 61 215 -9 5 897 793 185 7 0 chr17 40997754 40997889 -54274762 + B1_Mur4 SINE Alu 6 141 -9 5 897 183 232 0 0 chr17 40998420 40998476 -54274175 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 897 5007 92 25 29 chr17 40999240 41000000 -54272651 - RLTR13D5 LTR ERVK 0 1023 267 5 897 1921 98 4 36 chr17 41000000 41000275 -54272376 - RLTR13D5 LTR ERVK -757 266 1 1 897 406 272 105 0 chr17 41001356 41001470 -54271181 + B1F SINE Alu 9 134 -15 2 897 463 285 62 36 chr17 41002145 41002338 -54270313 + B3A SINE B2 1 198 0 3 897 659 267 0 0 chr17 41002419 41002565 -54270086 - B1_Mur2 SINE Alu -2 147 2 4 897 204 306 26 62 chr17 41003046 41003158 -54269493 + L2b LINE L2 3179 3316 -71 5 897 22 35 0 0 chr17 41003643 41003672 -54268979 + AT_rich Low_complexity Low_complexity 1 29 0 6 897 202 399 76 55 chr17 41003973 41004209 -54268442 + L2b LINE L2 3068 3308 -67 7 897 1286 270 81 58 chr17 41004365 41004750 -54267901 - MTD LTR MaLR -14 405 13 8 897 375 351 7 43 chr17 41005657 41005797 -54266854 + RSINE1 SINE B4 27 161 -4 9 897 629 133 17 0 chr17 41005822 41005942 -54266709 + (TCTCCC)n Simple_repeat Simple_repeat 5 126 0 1 897 397 255 166 0 chr17 41006227 41006372 -54266279 - MER67C LTR ERV1 -35 479 311 1 897 282 282 13 13 chr17 41006465 41006487 -54266164 - ID SINE ID -141 83 5 1 897 298 246 0 0 chr17 41006487 41006544 -54266107 - ID2 SINE ID -22 61 5 1 897 405 293 67 95 chr17 41006543 41006857 -54265794 - MER67C LTR ERV1 -391 320 1 1 897 23 33 0 0 chr17 41007451 41007481 -54265170 + AT_rich Low_complexity Low_complexity 1 30 0 1 897 293 267 133 0 chr17 41007697 41007772 -54264879 - RSINE1 SINE B4 -70 95 11 1 897 348 24 0 0 chr17 41007966 41008007 -54264644 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 897 270 0 0 0 chr17 41008007 41008036 -54264615 + (GA)n Simple_repeat Simple_repeat 1 30 0 1 897 816 130 86 6 chr17 41008073 41008236 -54264415 + Lx LINE L1 6478 6653 -1 1 897 357 311 75 58 chr17 41009267 41009455 -54263196 + B3A SINE B2 1 191 -7 1 897 301 207 12 12 chr17 41009485 41009568 -54263083 + GA-rich Low_complexity Low_complexity 4 86 0 2 897 207 0 0 0 chr17 41009858 41009881 -54262770 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 897 544 367 62 0 chr17 41010015 41010255 -54262396 - MER67D LTR ERV1 -90 424 170 2 897 549 298 52 57 chr17 41010351 41010561 -54262090 - B3 SINE B2 -5 211 3 2 897 24 0 0 0 chr17 41011238 41011262 -54261389 + AT_rich Low_complexity Low_complexity 1 24 0 2 897 269 286 22 4 chr17 41011465 41011576 -54261075 - MTD LTR MaLR -14 405 288 2 897 310 212 81 12 chr17 41011702 41011788 -54260863 + RMER5 LTR ERV1 33 124 -410 2 897 772 266 146 25 chr17 41011827 41012108 -54260543 + RMER5 LTR ERV1 220 534 0 2 897 222 208 0 0 chr17 41012263 41012311 -54260340 + CT-rich Low_complexity Low_complexity 3 50 0 2 897 294 299 20 20 chr17 41012336 41012435 -54260216 - PB1D9 SINE Alu -20 100 2 2 897 421 194 63 21 chr17 41012950 41013045 -54259606 + RLTR23 LTR ERV1 332 430 0 2 897 812 287 9 9 chr17 41013048 41013259 -54259392 + B3 SINE B2 2 212 -4 3 897 248 351 83 38 chr17 41013393 41013526 -54259125 + B1F SINE Alu 1 139 -10 3 897 231 294 93 52 chr17 41013905 41013936 -54258715 + MT2B LTR ERVL 139 173 -428 3 897 282 197 224 0 chr17 41013936 41014012 -54258639 + B1_Mur2 SINE Alu 3 95 -54 3 897 221 306 111 10 chr17 41014012 41014035 -54258616 + B4 SINE B4 88 196 -96 3 897 294 275 236 39 chr17 41014333 41014511 -54258140 - MIR SINE MIR -19 243 31 3 897 202 253 86 21 chr17 41015093 41015186 -54257465 + MIRb SINE MIR 118 216 -52 3 897 183 238 0 23 chr17 41015154 41015197 -54257454 + MIR3 SINE MIR 147 188 -20 3 897 647 255 86 25 chr17 41015408 41015605 -54257046 + B3 SINE B2 1 209 -7 3 897 421 312 46 11 chr17 41015691 41015866 -54256785 + B3A SINE B2 2 182 -16 3 897 22 35 0 0 chr17 41015889 41015918 -54256733 + AT_rich Low_complexity Low_complexity 1 29 0 4 897 694 191 203 22 chr17 41015963 41016145 -54256506 - B3 SINE B2 0 216 2 4 897 243 0 0 0 chr17 41016694 41016721 -54255930 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 897 21 0 0 0 chr17 41017881 41017902 -54254749 + AT_rich Low_complexity Low_complexity 1 21 0 4 897 711 137 82 30 chr17 41017902 41018037 -54254614 - B1_Mur4 SINE Alu 0 150 9 4 897 338 274 10 10 chr17 41018104 41018200 -54254451 - B1F1 SINE Alu -9 140 45 4 897 217 314 80 73 chr17 41019155 41019306 -54253345 - L2b LINE L2 -27 3348 3197 4 897 272 373 61 37 chr17 41019442 41019687 -54252964 + Lx8 LINE L1 7078 7328 -145 4 897 429 128 128 0 chr17 41019689 41019783 -54252868 + Lx9 LINE L1 7400 7505 -139 4 897 258 242 16 0 chr17 41020183 41020245 -54252406 - RLTR19C LTR ERVK -409 97 35 4 897 366 143 0 0 chr17 41020275 41020345 -54252306 + Lx9 LINE L1 7569 7638 -6 4 897 445 221 177 46 chr17 41020901 41021076 -54251575 + RMER15 LTR ERVL 340 537 -38 5 897 1499 204 73 9 chr17 41021320 41021591 -54251060 + Lx9 LINE L1 7192 7476 -168 5 897 594 62 31 0 chr17 41021591 41021687 -54250964 + (TCTA)n Simple_repeat Simple_repeat 3 101 0 5 897 1499 204 73 9 chr17 41021687 41021841 -54250810 + Lx9 LINE L1 7477 7644 0 5 897 405 0 0 0 chr17 41021966 41022011 -54250640 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 897 228 250 13 93 chr17 41022017 41022092 -54250559 - ID4 SINE ID -12 71 3 5 897 230 381 59 6 chr17 41022434 41022603 -54250048 - MER5B DNA MER1_type 0 178 1 5 897 1150 63 28 0 chr17 41022608 41022751 -54249900 + B1_Mus2 SINE Alu 1 147 0 5 897 228 23 67 22 chr17 41022754 41022799 -54249852 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 5 897 254 242 15 61 chr17 41022939 41023005 -54249646 + RSINE1 SINE B4 103 165 0 5 897 4224 38 2 8 chr17 41023288 41023794 -54248857 + RLTR1C LTR ERV1 1 503 0 5 897 353 297 126 102 chr17 41024222 41024507 -54248144 + MLT1B LTR MaLR 83 374 -16 6 897 226 336 90 38 chr17 41024489 41024622 -54248029 - ORR1E LTR MaLR -7 352 213 6 897 601 296 32 87 chr17 41024850 41025068 -54247583 - B3A SINE B2 0 216 11 6 897 440 320 56 112 chr17 41025141 41025444 -54247207 + ORR1D2 LTR MaLR 43 328 -42 6 898 678 252 20 20 chr17 41025582 41025728 -54246923 - B1_Mur1 SINE Alu -3 146 1 6 898 414 0 0 0 chr17 41025847 41025893 -54246758 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 6 898 1256 14 0 0 chr17 41025895 41026036 -54246615 - B1_Mus2 SINE Alu -6 141 1 6 898 257 289 81 141 chr17 41026329 41026478 -54246173 + MLT1I LTR MaLR 253 392 -19 6 898 438 108 0 0 chr17 41026601 41026666 -54245985 + (TCCC)n Simple_repeat Simple_repeat 4 68 0 6 898 413 252 161 8 chr17 41026691 41026815 -54245836 - B1_Mur2 SINE Alu -6 143 1 6 898 2509 131 45 9 chr17 41027314 41027737 -54244914 - RMER6B LTR ERVK -23 438 1 7 898 430 288 47 105 chr17 41027916 41027941 -54244710 - RSINE1 SINE B4 0 165 141 7 898 453 36 0 0 chr17 41027941 41027996 -54244655 + (TG)n Simple_repeat Simple_repeat 1 55 0 7 898 430 288 47 105 chr17 41027996 41028141 -54244510 - RSINE1 SINE B4 -25 140 5 7 898 288 0 0 0 chr17 41028412 41028444 -54244207 + (TA)n Simple_repeat Simple_repeat 2 33 0 7 898 333 0 0 0 chr17 41028444 41028480 -54244171 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 898 2356 154 32 14 chr17 41028494 41028928 -54243723 - Lx LINE L1 -6 6648 6207 7 898 604 330 69 57 chr17 41029309 41029659 -54242992 + ORR1E LTR MaLR 1 354 -5 7 898 1165 44 0 0 chr17 41029707 41029844 -54242807 + B1_Mus2 SINE Alu 1 137 -10 7 898 240 59 0 0 chr17 41029844 41029878 -54242773 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 898 632 124 9 0 chr17 41029925 41030030 -54242621 + (TC)n Simple_repeat Simple_repeat 2 107 0 7 898 1548 178 61 78 chr17 41030230 41030590 -54242061 - ORR1B1 LTR MaLR 0 394 41 8 898 186 43 0 0 chr17 41030764 41030787 -54241864 + (TTTC)n Simple_repeat Simple_repeat 1 23 0 8 898 951 107 0 33 chr17 41030788 41030972 -54241679 + (TTC)n Simple_repeat Simple_repeat 3 180 0 8 898 310 330 11 0 chr17 41031466 41031560 -54241091 + CT-rich Low_complexity Low_complexity 1 95 0 8 898 1088 67 0 62 chr17 41031561 41031753 -54240898 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 8 898 492 48 0 0 chr17 41031753 41031816 -54240835 + (TTTC)n Simple_repeat Simple_repeat 4 66 0 8 898 26 0 0 0 chr17 41032356 41032382 -54240269 + AT_rich Low_complexity Low_complexity 1 26 0 8 898 1140 71 0 0 chr17 41032385 41032525 -54240126 - B1_Mus2 SINE Alu -6 141 2 8 898 916 274 27 9 chr17 41032749 41032970 -54239681 + MTE2b LTR MaLR 3 227 -152 8 898 487 319 65 40 chr17 41033049 41033442 -54239209 - RLTR12B LTR ERVK -250 278 1 8 898 688 211 7 60 chr17 41033450 41033601 -54239050 - B1_Mur2 SINE Alu 0 149 7 9 898 27 49 0 0 chr17 41033716 41033757 -54238894 + AT_rich Low_complexity Low_complexity 1 41 0 9 898 31 76 0 0 chr17 41033802 41033868 -54238783 + AT_rich Low_complexity Low_complexity 1 66 0 9 898 786 255 30 142 chr17 41034274 41034712 -54237939 - RMER17C LTR ERVK -21 389 1 9 898 641 295 60 111 chr17 41034720 41035265 -54237386 + RMER20B LTR ERVK 30 596 -31 9 898 198 0 0 0 chr17 41036466 41036488 -54236163 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 9 898 2557 111 80 3 chr17 41036628 41037018 -54235633 - RLTR9B2 LTR ERVK 0 420 1 9 898 854 166 27 54 chr17 41038572 41038757 -54233894 - B2_Mm2 SINE B2 -15 180 1 9 898 222 37 0 0 chr17 41038766 41038793 -54233858 + (T)n Simple_repeat Simple_repeat 1 27 0 9 898 1573 204 75 16 chr17 41039189 41039613 -54233038 + Lx9 LINE L1 7196 7644 0 9 898 325 105 0 0 chr17 41039822 41039879 -54232772 + L1Md_F2 LINE L1 6519 6575 -7 1 898 332 100 0 0 chr17 41040540 41040590 -54232061 - B1_Mus1 SINE Alu -98 50 1 1 898 207 175 0 0 chr17 41041062 41041102 -54231549 + G-rich Low_complexity Low_complexity 1 40 0 1 898 21 0 0 0 chr17 41041527 41041548 -54231103 + GC_rich Low_complexity Low_complexity 1 21 0 1 898 497 76 9 54 chr17 41042136 41042247 -54230404 + (GGA)n Simple_repeat Simple_repeat 3 108 0 1 898 312 253 213 18 chr17 41042529 41042724 -54229927 + MER57D LTR ERV1 157 409 -25 1 898 418 83 14 14 chr17 41042744 41042817 -54229834 + (TTA)n Simple_repeat Simple_repeat 3 75 0 1 898 1125 279 95 43 chr17 41043428 41043717 -54228934 + L1MA6 LINE L1 5155 5458 -842 1 898 245 29 29 0 chr17 41043717 41043751 -54228900 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 898 1074 60 15 0 chr17 41043751 41043885 -54228766 - B1_Mus2 SINE Alu -9 138 3 1 898 1125 277 112 41 chr17 41043885 41044395 -54228256 + L1MA6 LINE L1 5459 6007 -293 1 898 661 212 0 8 chr17 41044421 41044554 -54228097 + B1_Mus2 SINE Alu 1 132 -15 1 898 210 154 0 0 chr17 41044573 41044612 -54228039 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 898 492 18 0 0 chr17 41045064 41045121 -54227530 + (GAAA)n Simple_repeat Simple_repeat 2 58 0 1 898 290 276 26 0 chr17 41045169 41045245 -54227406 + (TATG)n Simple_repeat Simple_repeat 1 78 0 1 898 1726 149 4 4 chr17 41045247 41045516 -54227135 + ORR1A2 LTR MaLR 5 273 -54 1 898 567 180 0 0 chr17 41045523 41045634 -54227017 + (TA)n Simple_repeat Simple_repeat 2 112 0 1 898 764 169 0 18 chr17 41045646 41045815 -54226836 + (TA)n Simple_repeat Simple_repeat 1 166 0 1 898 796 184 28 0 chr17 41045818 41045959 -54226692 - B1_Mur4 SINE Alu -5 145 1 1 898 846 184 14 0 chr17 41046243 41046390 -54226261 + B1_Mur4 SINE Alu 1 149 -1 1 898 540 73 0 0 chr17 41046393 41046475 -54226176 + (CAATA)n Simple_repeat Simple_repeat 2 83 0 1 898 309 51 0 0 chr17 41046814 41046853 -54225798 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 898 22 0 0 0 chr17 41047282 41047304 -54225347 + AT_rich Low_complexity Low_complexity 1 22 0 1 898 952 274 55 63 chr17 41047311 41047708 -54224943 + MTD LTR MaLR 1 394 -25 1 898 24 0 0 0 chr17 41048366 41048390 -54224261 + AT_rich Low_complexity Low_complexity 1 24 0 1 898 301 238 112 0 chr17 41048427 41048507 -54224144 + PB1 SINE Alu 39 127 0 1 898 213 296 0 0 chr17 41048535 41048589 -54224062 + ID4 SINE ID 4 57 -26 1 898 403 243 71 15 chr17 41048595 41048733 -54223918 - MTD LTR MaLR -5 416 276 1 898 444 51 0 0 chr17 41048912 41048971 -54223680 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 898 804 194 0 7 chr17 41049428 41049573 -54223078 - B3 SINE B2 -71 145 2 1 898 4939 26 0 2 chr17 41050033 41050605 -54222046 + L1Md_T LINE L1 6012 6582 0 1 898 247 328 130 29 chr17 41050632 41050839 -54221812 - RLTR10 LTR ERVK -4 386 159 1 898 1381 185 112 74 chr17 41051992 41052399 -54220252 + RLTR11A LTR ERVK 1 450 -127 1 898 385 359 60 22 chr17 41052541 41052726 -54219925 - MER82 DNA MER2_type -13 640 449 1 898 1525 43 27 0 chr17 41052727 41052914 -54219737 - B2_Mm1a SINE B2 0 193 2 1 898 448 282 174 13 chr17 41053027 41053257 -54219394 - MER82 DNA MER2_type -290 363 97 1 898 25 0 0 0 chr17 41054381 41054406 -54218245 + AT_rich Low_complexity Low_complexity 1 25 0 1 898 294 261 14 0 chr17 41054565 41054634 -54218017 - U1 snRNA snRNA -93 72 3 1 898 21 36 0 0 chr17 41054644 41054672 -54217979 + AT_rich Low_complexity Low_complexity 1 28 0 1 898 315 289 0 21 chr17 41054672 41054799 -54217852 - MLT1C LTR MaLR -8 619 375 1 898 386 296 0 0 chr17 41057336 41057434 -54215217 + B1F SINE Alu 1 98 -51 1 898 1321 77 28 0 chr17 41058981 41059162 -54213489 + B2_Mm2 SINE B2 2 187 -8 1 898 28 0 0 0 chr17 41060016 41060044 -54212607 + AT_rich Low_complexity Low_complexity 1 28 0 1 898 451 252 34 27 chr17 41060219 41060366 -54212285 + B1F SINE Alu 2 149 0 1 898 282 29 0 0 chr17 41061132 41061167 -54211484 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 898 21 0 0 0 chr17 41061403 41061424 -54211227 + AT_rich Low_complexity Low_complexity 1 21 0 1 898 38 75 0 0 chr17 41061994 41062074 -54210577 + AT_rich Low_complexity Low_complexity 1 80 0 1 898 266 255 37 19 chr17 41062171 41062279 -54210372 - L1MC5 LINE L1 -179 7782 7673 1 898 2036 88 34 21 chr17 41062602 41062929 -54209722 - IAPEY_LTR LTR ERVK 0 385 55 1 898 1185 7 0 28 chr17 41063659 41063800 -54208851 + B1_Mm SINE Alu 2 138 -9 1 898 612 0 0 0 chr17 41063800 41063868 -54208783 + (CAAAC)n Simple_repeat Simple_repeat 2 69 0 1 898 1058 92 0 0 chr17 41064386 41064528 -54208123 - Lx LINE L1 -182 6472 6331 1 898 506 68 289 25 chr17 41064528 41064649 -54208002 + Lx LINE L1 6502 6654 0 1 898 419 266 54 83 chr17 41065284 41065452 -54207199 + RSINE1 SINE B4 3 165 0 1 898 2147 139 30 2 chr17 41065674 41066100 -54206551 + L1_Mur2 LINE L1 2763 3200 -2677 1 898 1368 242 121 3 chr17 41066149 41066480 -54206171 + MTD LTR MaLR 50 419 0 1 898 934 45 8 15 chr17 41066591 41066725 -54205926 - L1Md_F2 LINE L1 -10 6572 6440 1 898 195 42 0 0 chr17 41067145 41067169 -54205482 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1 898 1366 266 19 3 chr17 41067178 41067544 -54205107 - Lx5 LINE L1 -42 7008 6637 1 898 423 0 0 0 chr17 41068025 41068072 -54204579 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 898 32 0 0 0 chr17 41070175 41070207 -54202444 + AT_rich Low_complexity Low_complexity 1 32 0 1 898 953 281 47 9 chr17 41070227 41070565 -54202086 - Lx6 LINE L1 -11 7449 7099 1 898 258 156 0 0 chr17 41070659 41070704 -54201947 + A-rich Low_complexity Low_complexity 1 45 0 1 898 225 0 0 0 chr17 41071296 41071321 -54201330 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1 898 746 183 250 0 chr17 41072265 41072445 -54200206 - URR1B DNA MER1_type 0 225 1 1 898 195 185 0 0 chr17 41073490 41073514 -54199137 + A-rich Low_complexity Low_complexity 1 24 0 1 898 1194 62 7 0 chr17 41073514 41073660 -54198991 + B1_Mus2 SINE Alu 1 147 0 1 898 195 185 0 0 chr17 41073660 41073700 -54198951 + A-rich Low_complexity Low_complexity 25 64 0 1 898 252 273 0 0 chr17 41074919 41074985 -54197666 + ID4 SINE ID 2 67 -16 1 898 306 292 21 71 chr17 41076611 41076751 -54195900 - MLT1J LTR MaLR -45 467 335 1 898 581 311 66 14 chr17 41077143 41077508 -54195143 - L1MB3 LINE L1 -9 6174 5791 1 898 201 221 38 25 chr17 41077725 41077804 -54194847 + (TA)n Simple_repeat Simple_repeat 1 80 0 1 898 252 0 0 0 chr17 41078598 41078626 -54194025 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 898 21 36 0 0 chr17 41078720 41078748 -54193903 + AT_rich Low_complexity Low_complexity 1 28 0 1 898 371 335 73 10 chr17 41079065 41079305 -54193346 + Charlie1b DNA MER1_type 1 264 -259 1 898 613 294 94 43 chr17 41079305 41079582 -54193069 + B4 SINE B4 2 292 0 1 898 23 78 0 0 chr17 41079635 41079686 -54192965 + AT_rich Low_complexity Low_complexity 1 51 0 1 898 1059 127 85 17 chr17 41080120 41080296 -54192355 - B2_Mm2 SINE B2 -7 188 1 1 898 237 279 12 25 chr17 41080325 41080406 -54192245 + ID2 SINE ID 2 81 -2 1 898 282 29 0 0 chr17 41081422 41081457 -54191194 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 898 669 285 86 27 chr17 41081509 41081916 -54190735 - L1_Rod LINE L1 -20 5827 5397 1 898 559 260 105 8 chr17 41081950 41082074 -54190577 - B1F2 SINE Alu -8 141 6 1 898 1717 249 60 19 chr17 41082131 41082611 -54190040 - Lx6 LINE L1 -16 7444 6945 1 898 316 310 75 30 chr17 41082665 41082998 -54189653 - L1_Mur3 LINE L1 -460 5420 5073 1 898 34 89 0 0 chr17 41083042 41083132 -54189519 + AT_rich Low_complexity Low_complexity 1 90 0 1 898 264 77 0 0 chr17 41083132 41083171 -54189480 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 898 196 306 118 0 chr17 41083385 41083470 -54189181 - MIRm SINE MIR -80 196 102 1 898 309 250 0 12 chr17 41084447 41084532 -54188119 + (CA)n Simple_repeat Simple_repeat 1 84 0 1 898 282 214 0 0 chr17 41084553 41084642 -54188009 + (CA)n Simple_repeat Simple_repeat 2 90 0 1 898 464 348 118 7 chr17 41085005 41085121 -54187530 - Lx8 LINE L1 -5 7468 7345 1 898 198 0 0 0 chr17 41085121 41085143 -54187508 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 898 464 348 118 7 chr17 41085143 41085330 -54187321 - Lx8 LINE L1 -129 7344 7132 1 898 581 226 40 45 chr17 41085341 41085540 -54187111 - Lx8 LINE L1 -430 7043 6846 1 898 1173 61 0 13 chr17 41086184 41086334 -54186317 - B1_Mus1 SINE Alu 0 148 1 1 898 3021 80 2 15 chr17 41086735 41087140 -54185511 - MTB LTR MaLR 0 400 1 1 898 6853 106 9 65 chr17 41087140 41088304 -54184347 - MTB-int LTR MaLR 0 1098 1 1 898 2833 81 50 0 chr17 41088304 41088685 -54183966 - MTB LTR MaLR 0 400 1 1 898 6444 62 0 0 chr17 41089949 41090760 -54181891 - L1Md_T LINE L1 0 6582 5772 1 898 1223 176 62 136 chr17 41091114 41091534 -54181117 - RMER17C LTR ERVK -21 389 1 1 898 23 0 0 0 chr17 41091590 41091613 -54181038 + AT_rich Low_complexity Low_complexity 1 23 0 1 898 29 47 0 0 chr17 41093421 41093464 -54179187 + AT_rich Low_complexity Low_complexity 1 43 0 1 898 21 0 0 0 chr17 41093805 41093826 -54178825 + AT_rich Low_complexity Low_complexity 1 21 0 1 898 330 26 0 0 chr17 41093979 41094018 -54178633 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 898 382 262 47 35 chr17 41094811 41094981 -54177670 - L1M2 LINE L1 -2494 3649 3478 1 898 290 237 137 21 chr17 41095882 41095977 -54176674 - RMER15 LTR ERVL -116 459 354 1 898 426 20 0 0 chr17 41096289 41096340 -54176311 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 898 744 65 0 0 chr17 41096342 41096449 -54176202 + (GA)n Simple_repeat Simple_repeat 1 107 0 1 898 215 288 68 0 chr17 41096743 41096816 -54175835 - L2c LINE L2 -24 3363 3286 1 898 344 252 39 83 chr17 41096962 41097178 -54175473 + RLTR11B LTR ERVK 164 381 -64 1 898 224 170 19 0 chr17 41097378 41097431 -54175220 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 898 840 176 0 26 chr17 41097974 41098126 -54174525 - B1_Mur2 SINE Alu 0 149 2 2 898 35 24 0 0 chr17 41098126 41098168 -54174483 + AT_rich Low_complexity Low_complexity 1 42 0 2 898 25 31 0 0 chr17 41098567 41098599 -54174052 + AT_rich Low_complexity Low_complexity 1 32 0 2 898 337 240 103 28 chr17 41099991 41100098 -54172553 - MLT1E1A LTR MaLR -431 249 135 2 898 420 123 0 0 chr17 41100147 41100220 -54172431 + (TG)n Simple_repeat Simple_repeat 2 74 0 2 898 28 0 0 0 chr17 41101083 41101111 -54171540 + AT_rich Low_complexity Low_complexity 1 28 0 2 898 343 259 22 7 chr17 41101134 41101270 -54171381 - L1MA6 LINE L1 -26 6274 6137 2 898 1170 80 102 6 chr17 41101363 41101540 -54171111 + B2_Mm2 SINE B2 2 195 0 2 898 329 238 125 5 chr17 41102055 41102261 -54170390 + L1MB3 LINE L1 5060 5298 -848 2 898 33827 35 0 0 chr17 41102298 41107937 -54164714 + L1Md_T LINE L1 1 5589 -297 2 898 9043 5 0 0 chr17 41107937 41108998 -54163653 + L1Md_T LINE L1 5590 6585 0 2 898 781 222 101 20 chr17 41109008 41109206 -54163445 + B3 SINE B2 2 215 -1 2 898 560 281 62 53 chr17 41109332 41109652 -54162999 + L1MB3 LINE L1 5326 5648 -532 2 898 246 245 112 47 chr17 41110016 41110123 -54162528 + L1MB3 LINE L1 5689 5802 -381 2 898 210 138 52 0 chr17 41110123 41110181 -54162470 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 898 711 312 21 21 chr17 41110185 41110519 -54162132 + L1MB3 LINE L1 5803 6136 -47 2 898 1116 68 7 20 chr17 41110636 41110786 -54161865 - B1_Mus1 SINE Alu 0 148 1 2 898 1065 224 0 5 chr17 41110808 41111014 -54161637 - B3 SINE B2 -11 205 1 2 898 3169 90 2 11 chr17 41111177 41111625 -54161026 - L1_Mus1 LINE L1 0 6567 6124 2 898 25 31 0 0 chr17 41111879 41111911 -54160740 + AT_rich Low_complexity Low_complexity 1 32 0 2 898 6717 59 25 24 chr17 41112090 41112667 -54159984 + L1_Mus2 LINE L1 5625 6224 -342 2 898 2723 84 34 0 chr17 41112667 41113048 -54159603 - MTA_Mm LTR MaLR -2 394 1 2 898 7927 61 30 9 chr17 41113048 41114124 -54158527 - MTA_Mm-int LTR MaLR 0 1098 1 2 898 3090 44 29 0 chr17 41114124 41114509 -54158142 - MTA_Mm LTR MaLR 0 396 1 2 898 6717 59 25 24 chr17 41114509 41114870 -54157781 + L1_Mus2 LINE L1 6225 6564 -2 2 898 510 61 0 0 chr17 41114883 41114949 -54157702 + (CA)n Simple_repeat Simple_repeat 2 67 0 2 898 706 213 116 0 chr17 41116288 41116443 -54156208 + RMER6D LTR ERVK 3 175 -545 2 898 52358 24 17 6 chr17 41116443 41122816 -54149835 - IAPEz-int LTR ERVK -28 6453 8 2 898 2955 21 3 0 chr17 41122816 41123152 -54149499 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 898 7551 69 14 5 chr17 41123171 41124381 -54148270 - L1_Mus3 LINE L1 -3 6635 5416 2 898 222 296 0 0 chr17 41124720 41124774 -54147877 + (TATG)n Simple_repeat Simple_repeat 3 56 0 2 898 3916 71 14 0 chr17 41125002 41125510 -54147141 - L1_Mus1 LINE L1 0 6567 6053 2 898 510 46 0 0 chr17 41125827 41125892 -54146759 + (CA)n Simple_repeat Simple_repeat 2 66 0 2 898 242 330 0 10 chr17 41126170 41126268 -54146383 + (TG)n Simple_repeat Simple_repeat 2 98 0 2 898 237 375 0 0 chr17 41126409 41126489 -54146162 - PB1D10 SINE Alu -12 105 26 2 898 394 34 51 0 chr17 41126656 41126715 -54145936 + (TTTA)n Simple_repeat Simple_repeat 1 62 0 2 898 21 0 0 0 chr17 41127123 41127144 -54145507 + AT_rich Low_complexity Low_complexity 1 21 0 2 898 881 115 39 0 chr17 41127553 41127683 -54144968 - B1_Mm SINE Alu 0 147 13 2 898 5231 71 0 0 chr17 41127683 41128358 -54144293 + L1Md_T LINE L1 5908 6582 0 2 898 235 300 147 0 chr17 41129142 41129292 -54143359 - MIRb SINE MIR -76 192 21 2 898 189 315 85 59 chr17 41129786 41129904 -54142747 - MIRm SINE MIR -92 184 64 2 898 24 32 0 0 chr17 41130475 41130506 -54142145 + AT_rich Low_complexity Low_complexity 1 31 0 2 898 214 190 26 115 chr17 41130589 41130702 -54141949 + CT-rich Low_complexity Low_complexity 6 108 0 2 898 473 327 12 6 chr17 41130716 41130885 -54141766 - ID_B1 SINE B4 -1 223 54 2 898 234 0 0 0 chr17 41131668 41131694 -54140957 + (T)n Simple_repeat Simple_repeat 1 26 0 2 898 1526 249 48 5 chr17 41131723 41132115 -54140536 - Lx6 LINE L1 -1 7459 7051 2 898 594 41 0 0 chr17 41133664 41133737 -54138914 + (TG)n Simple_repeat Simple_repeat 2 74 0 2 898 407 330 34 0 chr17 41133754 41133872 -54138779 - RSINE1 SINE B4 -40 125 4 2 898 330 315 61 0 chr17 41134708 41134905 -54137746 + L1M3 LINE L1 5254 5462 -706 2 898 368 297 59 0 chr17 41134925 41135026 -54137625 + B3A SINE B2 6 112 -86 2 898 432 0 0 0 chr17 41135027 41135075 -54137576 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 898 329 254 92 5 chr17 41135228 41135386 -54137265 + L1M3 LINE L1 5642 5826 -342 2 898 189 107 0 0 chr17 41135386 41135414 -54137237 + (GAAA)n Simple_repeat Simple_repeat 1 28 0 2 898 548 260 87 0 chr17 41135445 41135618 -54137033 - Lx7 LINE L1 -524 7172 6985 2 898 1047 277 66 15 chr17 41136557 41136949 -54135702 - L1_Rod LINE L1 0 5847 5436 2 898 527 122 11 0 chr17 41136949 41137039 -54135612 + (TC)n Simple_repeat Simple_repeat 1 91 0 2 898 981 126 11 6 chr17 41137039 41137215 -54135436 + (TTCC)n Simple_repeat Simple_repeat 2 178 0 2 898 645 159 9 9 chr17 41137271 41137385 -54135266 + B1_Mus1 SINE Alu 35 148 0 2 898 721 128 81 0 chr17 41137671 41137819 -54134832 + Lx2A1 LINE L1 6843 7002 -6 2 898 923 311 104 0 chr17 41138084 41138335 -54134316 + B4A SINE B4 6 282 -10 2 898 351 0 0 0 chr17 41138610 41138649 -54134002 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 898 198 71 0 0 chr17 41138751 41138779 -54133872 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 898 822 305 37 74 chr17 41139294 41139591 -54133060 + B4 SINE B4 3 288 -4 2 898 583 261 100 0 chr17 41139999 41140179 -54132472 - Lx6 LINE L1 -15 7445 7248 2 898 1461 161 42 0 chr17 41140170 41140431 -54132220 + L1_Mm LINE L1 5447 5718 -165 2 898 332 259 106 72 chr17 41140428 41140636 -54132015 - L1MC3 LINE L1 -305 7480 7266 2 898 623 265 6 44 chr17 41140672 41140830 -54131821 - B3A SINE B2 -45 153 2 2 898 294 212 115 0 chr17 41141714 41141827 -54130824 - Lx9 LINE L1 -2 7642 7517 2 898 386 69 17 0 chr17 41141847 41141905 -54130746 + (TA)n Simple_repeat Simple_repeat 1 59 0 2 898 1739 186 9 59 chr17 41141956 41142378 -54130273 - RMER17C LTR ERVK 0 410 10 2 898 486 329 43 31 chr17 41142465 41142628 -54130023 + ID_B1 SINE B4 2 166 -58 2 898 522 0 0 0 chr17 41142700 41142758 -54129893 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 2 898 462 49 0 0 chr17 41142889 41142950 -54129701 + (TAA)n Simple_repeat Simple_repeat 3 63 0 2 898 1134 58 0 7 chr17 41144148 41144288 -54128363 + B1_Mus1 SINE Alu 1 139 -9 2 898 342 0 0 0 chr17 41144288 41144326 -54128325 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2 898 21 82 0 0 chr17 41145915 41145964 -54126687 + AT_rich Low_complexity Low_complexity 1 49 0 2 898 252 149 0 0 chr17 41146039 41146086 -54126565 + (CAT)n Simple_repeat Simple_repeat 2 48 0 2 898 243 174 22 0 chr17 41146101 41146147 -54126504 + ORR1C2 LTR MaLR 2 48 -336 2 898 1438 34 78 0 chr17 41146694 41146873 -54125778 + B2_Mm1a SINE B2 1 193 0 2 898 306 73 0 0 chr17 41147404 41147445 -54125206 + (CCA)n Simple_repeat Simple_repeat 1 41 0 2 898 186 125 55 127 chr17 41147520 41147575 -54125076 - L3 LINE CR1 -3698 791 741 2 898 587 277 0 62 chr17 41148563 41148709 -54123942 - RSINE1 SINE B4 -10 155 19 2 898 194 291 0 0 chr17 41148811 41148858 -54123793 - L2c LINE L2 -76 3311 3242 2 898 24 32 0 0 chr17 41149736 41149767 -54122884 + AT_rich Low_complexity Low_complexity 1 31 0 2 898 690 92 17 8 chr17 41151451 41151571 -54121080 + L1_Mus3 LINE L1 6512 6632 -6 2 898 1912 148 56 0 chr17 41151581 41151919 -54120732 + L1_Mus4 LINE L1 5951 6307 -329 2 898 23 33 0 0 chr17 41152004 41152034 -54120617 + AT_rich Low_complexity Low_complexity 1 30 0 2 898 597 198 132 24 chr17 41152408 41152574 -54120077 - B2_Mm2 SINE B2 -11 184 1 2 898 3199 61 8 0 chr17 41152629 41153022 -54119629 + MTA_Mm LTR MaLR 1 396 0 2 898 537 333 0 8 chr17 41153166 41153293 -54119358 + RSINE1 SINE B4 12 137 -28 2 898 12003 110 18 16 chr17 41153339 41156276 -54116375 + L1Md_F2 LINE L1 31 2964 -2919 2 112 6091 88 1 8 chr17 41156278 41157163 -54115488 - L1Md_F2 LINE L1 0 6582 5704 2 899 17723 84 3 23 chr17 41157163 41159188 -54113463 + L1Md_F2 LINE L1 2951 4921 -962 2 899 5232 36 0 0 chr17 41159188 41159802 -54112849 - L1Md_T LINE L1 -1 6581 5968 2 899 17723 84 3 23 chr17 41159802 41160467 -54112184 + L1Md_F2 LINE L1 4922 5586 -297 2 899 7386 78 8 6 chr17 41160468 41161451 -54111200 + L1Md_F2 LINE L1 5588 6572 -10 2 899 391 314 87 10 chr17 41161803 41161999 -54110652 - B3 SINE B2 -4 212 2 2 899 833 286 10 19 chr17 41163786 41163993 -54108658 + B4 SINE B4 15 219 -73 2 899 257 343 15 0 chr17 41164036 41164103 -54108548 + B4 SINE B4 225 292 0 2 899 522 321 73 0 chr17 41164244 41164381 -54108270 + B1F2 SINE Alu 3 149 0 2 899 21 36 0 0 chr17 41164381 41164409 -54108242 + AT_rich Low_complexity Low_complexity 1 28 0 2 899 23 33 0 0 chr17 41164991 41165021 -54107630 + AT_rich Low_complexity Low_complexity 1 30 0 2 899 8520 56 0 3 chr17 41165416 41167260 -54105391 - L1Md_F2 LINE L1 -13 6569 4732 2 899 31238 55 16 22 chr17 41167255 41169435 -54103216 - L1Md_T LINE L1 -1 6581 4334 2 899 195 42 0 0 chr17 41169435 41169459 -54103192 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2 899 31238 82 19 40 chr17 41169459 41173886 -54098765 - L1Md_T LINE L1 -1550 4333 98 2 899 288 238 20 10 chr17 41173874 41173976 -54098675 - L1VL1 LINE L1 -6319 103 1 2 899 212 256 0 0 chr17 41174048 41174091 -54098560 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 899 1489 239 66 28 chr17 41174248 41174644 -54098007 - MTD LTR MaLR -8 411 1 2 899 27 0 0 0 chr17 41174832 41174859 -54097792 + AT_rich Low_complexity Low_complexity 1 27 0 2 899 21 0 0 0 chr17 41175668 41175689 -54096962 + GC_rich Low_complexity Low_complexity 1 21 0 2 899 1688 16 0 0 chr17 41177212 41177399 -54095252 + B2_Mm1a SINE B2 2 188 -5 2 899 443 365 40 18 chr17 41177631 41177842 -54094809 - B3A SINE B2 0 216 1 2 899 13602 97 10 4 chr17 41179724 41182561 -54090090 - L1_Mus2 LINE L1 0 6569 3716 3 899 8426 11 0 0 chr17 41182557 41183692 -54088959 - L1Md_A LINE L1 -1 6581 5447 3 899 39006 13 2 6 chr17 41183687 41190544 -54082107 - L1Md_A LINE L1 0 6582 1 3 899 11999 122 11 29 chr17 41190539 41192723 -54079928 - L1_Mus2 LINE L1 -2148 3738 1594 3 899 1249 115 59 2 chr17 41192723 41192996 -54079655 - L1_Mus2 LINE L1 -2541 1376 982 3 899 4367 110 20 0 chr17 41192996 41194306 -54078345 - L1_Mus3 LINE L1 -1 6566 5210 3 899 2512 188 20 3 chr17 41194291 41194876 -54077775 - L1Md_F LINE L1 -5409 1210 488 3 899 342 261 0 24 chr17 41194921 41195047 -54077604 - L1_Mus2 LINE L1 -6142 495 398 3 899 363 165 93 25 chr17 41195934 41196052 -54076599 - Lx9 LINE L1 -2 7642 7517 3 899 231 36 0 0 chr17 41196052 41196080 -54076571 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 899 922 86 56 21 chr17 41196304 41196433 -54076218 + B1_Mm SINE Alu 1 136 -11 3 899 237 33 0 0 chr17 41196433 41196463 -54076188 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 3 899 922 86 56 21 chr17 41196463 41196475 -54076176 + B1_Mm SINE Alu 137 147 0 3 899 207 111 28 0 chr17 41197446 41197482 -54075169 + (GAAA)n Simple_repeat Simple_repeat 2 38 0 3 899 784 300 15 11 chr17 41198337 41198600 -54074051 - Lx8 LINE L1 -809 6664 6401 3 899 980 325 25 18 chr17 41198595 41199031 -54073620 + Lx8 LINE L1 6681 7119 -354 3 899 2793 80 0 89 chr17 41199040 41199256 -54073395 - L1VL2 LINE L1 -2249 1366 1192 3 899 360 59 0 0 chr17 41199256 41199307 -54073344 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 3 899 1079 92 0 0 chr17 41199309 41199450 -54073201 - B1_Mus2 SINE Alu -6 141 1 3 899 4223 95 19 32 chr17 41199450 41200252 -54072399 - L1VL2 LINE L1 -2424 1191 370 3 899 510 300 159 6 chr17 41200244 41200559 -54072092 + Lx8 LINE L1 7110 7472 -1 3 899 1135 57 0 7 chr17 41201634 41201775 -54070876 + B1_Mus1 SINE Alu 3 142 -6 3 899 183 42 0 0 chr17 41201777 41201801 -54070850 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 899 707 253 89 166 chr17 41201912 41202000 -54070651 - ORR1D2 LTR MaLR 0 374 308 3 899 456 19 0 0 chr17 41202000 41202053 -54070598 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 3 899 707 322 45 91 chr17 41202053 41202194 -54070457 - ORR1D2 LTR MaLR -63 307 184 3 899 5642 108 16 2 chr17 41202194 41203018 -54069633 + Lx LINE L1 5813 6647 -7 3 899 707 322 45 91 chr17 41203018 41203190 -54069461 - ORR1D2 LTR MaLR -187 183 3 3 899 628 274 57 6 chr17 41203381 41203539 -54069112 + ORR1D1 LTR MaLR 1 166 -208 3 899 756 250 6 6 chr17 41203550 41203727 -54068924 - Lx7 LINE L1 -1331 6365 6189 3 899 190 81 54 0 chr17 41203727 41203764 -54068887 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 899 560 40 0 0 chr17 41203765 41203840 -54068811 - L1_Mus2 LINE L1 0 6566 6492 3 899 1407 45 0 0 chr17 41203841 41204017 -54068634 + L1_Mus2 LINE L1 6303 6478 -89 3 899 1139 256 57 11 chr17 41204019 41204391 -54068260 - Lx7 LINE L1 -1511 6185 5797 3 899 634 204 29 7 chr17 41204409 41204547 -54068104 - Lx4A LINE L1 -3 7055 6915 3 899 305 169 0 0 chr17 41204558 41204629 -54068022 - Lx7 LINE L1 -594 5286 5216 3 899 198 0 0 0 chr17 41204777 41204799 -54067852 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 3 899 706 224 0 40 chr17 41204799 41204948 -54067703 - B1_Mus2 SINE Alu -4 143 1 3 899 1397 321 42 53 chr17 41205460 41206436 -54066215 - Cheshire DNA MER1_type -21 2399 1435 3 899 295 246 128 24 chr17 41206440 41206565 -54066086 + Lx6 LINE L1 7296 7433 -27 3 899 957 308 87 15 chr17 41206586 41207067 -54065584 - Cheshire DNA MER1_type -984 1436 921 3 899 666 237 95 31 chr17 41207148 41207370 -54065281 + Lx5 LINE L1 6815 7050 0 3 899 621 250 241 21 chr17 41207768 41208050 -54064601 - RLTR9A LTR ERVK -24 344 1 3 899 227 297 0 0 chr17 41208354 41208428 -54064223 - L1MD2 LINE L1 -6433 114 41 3 899 545 213 13 0 chr17 41209176 41209326 -54063325 - Lx9 LINE L1 -6 7638 7487 3 899 7028 69 17 8 chr17 41209370 41210499 -54062152 - L1_Mus1 LINE L1 0 6567 5430 3 899 632 223 75 40 chr17 41210495 41210696 -54061955 - Lx9 LINE L1 -192 7452 7245 3 899 1574 135 33 66 chr17 41210714 41211047 -54061604 - RLTRETN_Mm LTR ERVK 0 322 1 3 899 18217 144 40 28 chr17 41211047 41214854 -54057797 - ETnERV2-int LTR ERVK -107 7299 2924 3 899 1726 43 0 0 chr17 41214854 41215065 -54057586 + L1Md_T LINE L1 6372 6582 0 3 899 3259 315 45 39 chr17 41215065 41216185 -54056466 - ETnERV2-int LTR ERVK -3244 2923 1790 3 899 12232 75 2 7 chr17 41216418 41218085 -54054566 - ETnERV2-int LTR ERVK -1654 1660 2 3 899 1520 145 33 66 chr17 41218086 41218419 -54054232 - RLTRETN_Mm LTR ERVK 0 322 1 3 899 18618 55 5 3 chr17 41218496 41220462 -54052189 + L1Md_F3 LINE L1 3069 5044 -839 3 899 2954 39 5 108 chr17 41220462 41220897 -54051754 + RLTR10 LTR ERVK 1 390 0 3 899 18618 55 5 3 chr17 41220897 41221443 -54051208 + L1Md_F3 LINE L1 5045 5586 -297 3 899 8013 51 1 5 chr17 41221444 41222444 -54050207 + L1Md_F3 LINE L1 5588 6583 -1 3 899 1548 261 98 27 chr17 41222544 41223166 -54049485 - Lx6 LINE L1 -4 7456 6467 3 899 4883 64 0 5 chr17 41223297 41223923 -54048728 - L1Md_F2 LINE L1 -3 6579 5957 3 899 270 0 0 0 chr17 41224957 41224987 -54047664 + (TC)n Simple_repeat Simple_repeat 2 31 0 3 899 26 82 0 0 chr17 41225513 41225574 -54047077 + AT_rich Low_complexity Low_complexity 1 61 0 3 899 289 264 94 8 chr17 41225846 41225956 -54046695 + MLT1E1A LTR MaLR 86 198 -482 3 899 612 38 0 0 chr17 41225956 41226035 -54046616 + (CA)n Simple_repeat Simple_repeat 2 80 0 3 899 477 0 0 0 chr17 41226035 41226087 -54046564 + (GA)n Simple_repeat Simple_repeat 2 54 0 3 899 279 324 157 32 chr17 41226087 41226188 -54046463 + MLT1E1A LTR MaLR 199 324 -356 3 899 900 328 27 0 chr17 41226188 41226450 -54046201 + B4A SINE B4 4 272 -20 3 899 473 0 0 17 chr17 41226458 41226516 -54046135 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 899 392 334 68 69 chr17 41226551 41226872 -54045779 + MLT1E1A LTR MaLR 328 678 -2 3 899 1306 235 74 17 chr17 41227412 41227762 -54044889 + ORR1D2 LTR MaLR 1 370 0 3 899 1546 37 16 0 chr17 41227939 41228128 -54044523 - B2_Mm1t SINE B2 0 193 2 3 899 815 284 111 28 chr17 41228958 41229330 -54043321 - L1M2 LINE L1 -508 5789 5387 3 899 201 70 0 140 chr17 41229356 41229406 -54043245 + T-rich Low_complexity Low_complexity 2 44 0 3 899 1357 287 45 43 chr17 41229532 41230326 -54042325 - L1M2 LINE L1 -1055 5088 4293 3 899 333 0 0 0 chr17 41232651 41232688 -54039963 + (GA)n Simple_repeat Simple_repeat 1 37 0 3 899 262 174 0 0 chr17 41232694 41232740 -54039911 + Lx7 LINE L1 7633 7678 -18 3 899 1725 168 39 61 chr17 41233301 41233662 -54038989 + ORR1B1 LTR MaLR 41 393 -1 3 899 1101 215 81 129 chr17 41233668 41233744 -54038907 - ORR1B1-int LTR MaLR -17 1946 1871 3 899 6075 48 0 8 chr17 41233744 41234504 -54038147 + L1Md_F2 LINE L1 5828 6581 -1 3 899 2191 179 97 33 chr17 41234504 41234983 -54037668 - ORR1B1-int LTR MaLR -93 1870 1003 3 899 750 187 5 108 chr17 41234979 41235165 -54037486 - ORR1B1 LTR MaLR -219 175 9 3 899 1967 127 35 0 chr17 41235748 41236062 -54036589 + Lx LINE L1 6323 6647 -7 3 899 342 0 0 0 chr17 41236187 41236225 -54036426 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 899 279 0 0 0 chr17 41236448 41236479 -54036172 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 899 336 261 58 16 chr17 41236589 41236710 -54035941 - L1MCa LINE L1 -5435 1316 1191 3 899 268 241 25 0 chr17 41236761 41236840 -54035811 - L1MCa LINE L1 -5188 857 777 3 899 304 327 130 53 chr17 41237110 41237394 -54035257 - L1MCa LINE L1 -5506 539 234 3 899 1116 168 84 24 chr17 41237401 41237614 -54035037 - URR1A DNA MER1_type 0 226 1 3 899 285 98 0 0 chr17 41237787 41237828 -54034823 + (AGGGGG)n Simple_repeat Simple_repeat 5 45 0 3 899 1072 139 0 24 chr17 41238184 41238390 -54034261 + L1_Mus4 LINE L1 6436 6636 0 3 899 234 0 0 0 chr17 41239764 41239790 -54032861 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 3 899 1788 278 46 43 chr17 41239796 41240779 -54031872 - Lx8 LINE L1 -11 7462 6426 3 899 191 336 80 72 chr17 41240871 41240996 -54031655 + L2b LINE L2 3249 3374 -1 3 899 375 93 0 44 chr17 41241368 41241458 -54031193 + (CAAAAA)n Simple_repeat Simple_repeat 2 87 0 3 899 417 110 0 0 chr17 41242076 41242149 -54030502 + (TC)n Simple_repeat Simple_repeat 1 73 0 3 899 334 295 94 9 chr17 41242379 41242485 -54030166 + RSINE1 SINE B4 6 120 -45 3 899 195 42 0 0 chr17 41242515 41242539 -54030112 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 3 899 243 0 0 0 chr17 41242820 41242847 -54029804 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 899 1144 69 7 0 chr17 41243666 41243811 -54028840 + B1_Mm SINE Alu 2 147 0 3 899 7164 146 32 10 chr17 41244169 41245896 -54026755 - Lx2A1 LINE L1 -10 6990 5212 3 899 774 48 0 0 chr17 41246790 41246893 -54025758 + (TG)n Simple_repeat Simple_repeat 1 103 0 3 899 594 0 0 0 chr17 41246893 41246958 -54025693 + (GA)n Simple_repeat Simple_repeat 1 66 0 3 899 520 309 0 31 chr17 41246959 41247086 -54025565 - RSINE1 SINE B4 -38 127 5 3 899 512 304 52 29 chr17 41249119 41249329 -54023322 - B3A SINE B2 0 216 2 3 899 362 216 0 76 chr17 41250387 41250492 -54022159 - RLTR11B LTR ERVK -356 97 1 3 899 754 196 154 54 chr17 41251607 41251661 -54020990 + ORR1C2 LTR MaLR 142 186 -198 3 899 401 93 27 0 chr17 41251661 41251736 -54020915 + (TCTG)n Simple_repeat Simple_repeat 4 80 0 3 899 754 196 154 54 chr17 41251736 41251902 -54020749 + ORR1C2 LTR MaLR 187 384 0 3 899 201 39 0 0 chr17 41253374 41253400 -54019251 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 3 899 3772 70 0 16 chr17 41253498 41253992 -54018659 - L1_Mus1 LINE L1 -1 6566 6081 3 899 623 161 0 8 chr17 41254127 41254246 -54018405 + T-rich Low_complexity Low_complexity 3 120 0 3 899 1208 54 0 0 chr17 41254246 41254393 -54018258 - B1_Mm SINE Alu 0 147 1 3 899 1193 312 23 30 chr17 41254432 41254704 -54017947 - Lx7 LINE L1 -383 7313 7049 3 899 1635 29 10 0 chr17 41254704 41254909 -54017742 - L1Md_F3 LINE L1 0 6584 6378 3 899 1193 312 23 30 chr17 41254909 41255063 -54017588 - Lx7 LINE L1 -648 7048 6890 3 899 237 222 19 0 chr17 41256613 41256667 -54015984 + GA-rich Low_complexity Low_complexity 1 55 0 3 899 518 283 45 23 chr17 41257249 41257426 -54015225 + B3A SINE B2 5 185 -13 3 899 339 299 88 13 chr17 41257912 41258071 -54014580 + RMER15 LTR ERVL 394 564 -11 3 899 304 327 9 43 chr17 41258238 41258353 -54014298 - RMER15 LTR ERVL -40 535 425 3 899 289 395 89 41 chr17 41259975 41260390 -54012261 + MLT1N2 LTR MaLR 23 457 -105 3 899 2594 164 17 19 chr17 41261568 41262035 -54010616 + Lx2B LINE L1 6532 6997 -3 3 899 25 0 0 0 chr17 41263367 41263392 -54009259 + AT_rich Low_complexity Low_complexity 1 25 0 3 899 7326 81 18 40 chr17 41263392 41264507 -54008144 - Lx3_Mus LINE L1 0 7009 5920 3 899 315 316 192 25 chr17 41264536 41264737 -54007914 + L1MEf LINE L1 833 1054 -5146 3 899 258 32 0 0 chr17 41264737 41264768 -54007883 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 899 315 316 192 25 chr17 41264768 41265013 -54007638 + L1MEf LINE L1 1055 1354 -4846 3 899 1815 37 0 0 chr17 41265026 41265244 -54007407 - L1Md_T LINE L1 -2 6580 6363 3 899 6772 20 0 0 chr17 41265245 41266369 -54006282 + L1Md_A LINE L1 5255 6378 -204 3 899 7192 78 19 4 chr17 41266391 41267892 -54004759 - L1_Mus2 LINE L1 -2 6564 5041 3 899 933 145 39 11 chr17 41268014 41268195 -54004456 + Lx3A LINE L1 6789 6974 -7 3 899 1982 51 8 38 chr17 41268197 41268464 -54004187 + L1Md_F3 LINE L1 6323 6581 -3 3 899 21 71 0 0 chr17 41268468 41268510 -54004141 + AT_rich Low_complexity Low_complexity 1 42 0 4 899 1175 306 81 3 chr17 41268927 41269297 -54003354 - MTD LTR MaLR -17 402 4 4 899 322 326 102 45 chr17 41269747 41269991 -54002660 - Lx9 LINE L1 -1 7472 7214 4 899 347 0 23 0 chr17 41269991 41270034 -54002617 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 899 219 36 0 0 chr17 41270034 41270061 -54002590 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 899 322 310 104 41 chr17 41270061 41270217 -54002434 - Lx9 LINE L1 -301 7343 7185 4 899 400 282 88 28 chr17 41270334 41270516 -54002135 + B3A SINE B2 1 193 -5 4 899 2154 125 19 0 chr17 41270600 41270920 -54001731 + ORR1A2 LTR MaLR 2 327 0 4 899 275 232 70 31 chr17 41271041 41271170 -54001481 + L1MA4 LINE L1 5803 5936 -364 4 899 283 341 52 73 chr17 41271205 41271341 -54001310 + MTEa LTR MaLR 1 133 -246 4 899 878 181 8 4 chr17 41271443 41271698 -54000953 + CT-rich Low_complexity Low_complexity 1 255 0 4 899 234 0 0 0 chr17 41271700 41271726 -54000925 + (CCTG)n Simple_repeat Simple_repeat 1 26 0 4 899 946 129 24 0 chr17 41271727 41271897 -54000754 + CT-rich Low_complexity Low_complexity 4 177 0 4 899 1221 106 0 0 chr17 41271908 41272088 -54000563 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 899 279 0 0 0 chr17 41272781 41272812 -53999839 + (TC)n Simple_repeat Simple_repeat 1 31 0 4 899 252 0 0 0 chr17 41272812 41272839 -53999812 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 899 192 135 0 0 chr17 41273187 41273224 -53999427 + (T)n Simple_repeat Simple_repeat 1 37 0 4 899 4102 147 11 0 chr17 41273888 41274536 -53998115 - Lx2 LINE L1 0 6997 6343 4 899 1987 201 46 3 chr17 41274721 41275111 -53997540 - MTB_Mm LTR MaLR 0 407 1 4 899 363 309 80 35 chr17 41275835 41276036 -53996615 - B3 SINE B2 -5 211 2 4 899 1168 54 0 13 chr17 41276241 41276390 -53996261 - B1_Mus2 SINE Alu 0 147 1 4 899 753 316 31 28 chr17 41277243 41277533 -53995118 - B4 SINE B4 0 292 2 4 899 332 329 48 14 chr17 41278176 41278321 -53994330 + Lx8 LINE L1 7071 7220 -253 4 899 8277 144 28 7 chr17 41278352 41280583 -53992068 + Lx LINE L1 4382 6654 0 4 899 304 340 71 26 chr17 41281270 41281424 -53991227 - L1MC4 LINE L1 -1044 6998 6838 4 899 217 315 82 19 chr17 41281556 41281763 -53990888 - L2 LINE L2 -1772 1647 1428 4 899 272 316 26 7 chr17 41282632 41282785 -53989866 - L1M5 LINE L1 -719 5475 5320 4 899 438 339 6 17 chr17 41282841 41283021 -53989630 + (TG)n Simple_repeat Simple_repeat 2 179 0 4 899 22 35 0 0 chr17 41283131 41283160 -53989491 + AT_rich Low_complexity Low_complexity 1 29 0 4 899 231 239 0 27 chr17 41283263 41283336 -53989315 - Lx4B LINE L1 -4 7054 6984 4 899 24 32 0 0 chr17 41284153 41284184 -53988467 + AT_rich Low_complexity Low_complexity 1 31 0 4 899 24 32 0 0 chr17 41284241 41284272 -53988379 + AT_rich Low_complexity Low_complexity 1 31 0 4 899 180 0 0 0 chr17 41284781 41284801 -53987850 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 899 306 0 0 0 chr17 41284803 41284837 -53987814 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 899 31 76 0 0 chr17 41285290 41285356 -53987295 + AT_rich Low_complexity Low_complexity 1 66 0 4 899 390 21 0 0 chr17 41285503 41285550 -53987101 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 899 394 290 35 120 chr17 41287044 41287361 -53985290 - L1MA4A LINE L1 -364 5939 5650 4 112 539 289 97 34 chr17 41287377 41287770 -53984881 + L1MA4A LINE L1 5201 5621 -676 4 900 1200 217 109 59 chr17 41287863 41288220 -53984431 + ORR1C1 LTR MaLR 1 375 -3 4 900 503 287 97 22 chr17 41288307 41288492 -53984159 + B3 SINE B2 1 199 -17 4 900 322 354 33 20 chr17 41288772 41288922 -53983729 + MLT1A1 LTR MaLR 11 162 -246 4 900 490 316 7 13 chr17 41288970 41289121 -53983530 + MLT1A1 LTR MaLR 259 408 0 4 900 272 260 28 46 chr17 41289846 41289955 -53982696 - L1MA4 LINE L1 -402 5898 5792 4 900 563 117 11 0 chr17 41289956 41290050 -53982601 + (TA)n Simple_repeat Simple_repeat 1 95 0 4 900 520 276 55 6 chr17 41290146 41290310 -53982341 - MTE2b LTR MaLR 0 379 208 4 900 650 87 38 19 chr17 41290306 41290412 -53982239 + B2_Mm2 SINE B2 82 189 -6 4 900 699 163 8 16 chr17 41290447 41290572 -53982079 + URR1B DNA MER1_type 102 225 0 4 900 258 246 0 0 chr17 41290572 41290624 -53982027 - MTE2b LTR MaLR -327 52 1 4 900 1697 181 194 0 chr17 41291412 41292002 -53980649 + RMER19B LTR ERVK 1 704 -198 4 900 4603 70 3 13 chr17 41292003 41292627 -53980024 - L1Md_F2 LINE L1 0 6582 5965 4 900 3030 61 2 2 chr17 41292627 41293026 -53979625 + L1Md_F2 LINE L1 5585 5954 -628 4 900 883 220 54 0 chr17 41293026 41293212 -53979439 + RMER19B LTR ERVK 695 890 -12 4 900 186 158 175 0 chr17 41293338 41293395 -53979256 - L4 LINE RTE -1307 722 656 4 900 1586 151 59 90 chr17 41293938 41294295 -53978356 + ORR1B1 LTR MaLR 41 386 -8 4 900 318 50 0 0 chr17 41295522 41295562 -53977089 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 900 444 274 36 18 chr17 41295635 41295854 -53976797 - L1MD1 LINE L1 -285 5957 5735 4 900 295 224 50 23 chr17 41296088 41296181 -53976470 - L1_Mur3 LINE L1 -703 5465 5334 4 900 497 378 147 26 chr17 41296730 41297802 -53974849 + L2 LINE L2 671 1872 -1547 4 900 261 0 0 0 chr17 41297889 41297918 -53974733 + (T)n Simple_repeat Simple_repeat 1 29 0 4 900 568 304 146 18 chr17 41297918 41298193 -53974458 - MTE2a LTR MaLR -67 312 3 4 900 223 211 35 17 chr17 41298662 41298720 -53973931 + L2 LINE L2 1980 2038 -1381 4 900 381 22 0 0 chr17 41298982 41299028 -53973623 + (TTTA)n Simple_repeat Simple_repeat 1 46 0 4 900 490 216 9 113 chr17 41299029 41299144 -53973507 + MTD LTR MaLR 18 120 -299 4 900 809 184 6 0 chr17 41299147 41299315 -53973336 + CT-rich Low_complexity Low_complexity 2 170 0 4 900 1110 82 7 0 chr17 41300983 41301129 -53971522 - B1_Mus1 SINE Alu -1 147 1 4 900 384 281 108 61 chr17 41301171 41301578 -53971073 - L1M3 LINE L1 -3344 2796 2363 4 900 470 337 5 49 chr17 41301578 41301781 -53970870 - B3A SINE B2 -3 195 2 4 900 384 281 108 61 chr17 41301781 41301881 -53970770 - L1M3 LINE L1 -3778 2362 2265 4 900 623 173 44 22 chr17 41301909 41302045 -53970606 + Lx9 LINE L1 6863 7001 -643 4 900 506 322 91 36 chr17 41302257 41302531 -53970120 - B4 SINE B4 0 292 4 4 900 581 27 13 0 chr17 41302541 41302616 -53970035 + (TG)n Simple_repeat Simple_repeat 1 76 0 4 900 442 300 30 24 chr17 41302760 41302924 -53969727 + Lx7 LINE L1 6987 7151 -545 4 900 437 214 112 0 chr17 41302934 41303032 -53969619 + ORR1C2 LTR MaLR 1 109 -275 4 900 1081 64 0 0 chr17 41303033 41303174 -53969477 + B1_Mus1 SINE Alu 2 142 -6 4 900 375 23 0 0 chr17 41303180 41303224 -53969427 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 4 900 789 158 0 0 chr17 41303252 41303391 -53969260 + GA-rich Low_complexity Low_complexity 2 140 0 4 900 1223 229 61 27 chr17 41303393 41303689 -53968962 + ORR1C2 LTR MaLR 77 382 -2 4 900 467 299 19 7 chr17 41303689 41303844 -53968807 + Lx7 LINE L1 7164 7320 -376 4 900 507 60 0 0 chr17 41303845 41303912 -53968739 + (TC)n Simple_repeat Simple_repeat 2 68 0 4 900 226 259 17 17 chr17 41304233 41304292 -53968359 + ID4_ SINE ID 16 74 -9 4 900 2564 157 60 10 chr17 41304336 41304838 -53967813 + RLTR11A2 LTR ERVK 1 527 0 4 900 532 324 17 61 chr17 41305387 41305617 -53967034 - ID_B1 SINE B4 -2 222 3 4 900 11601 142 8 44 chr17 41305751 41307909 -53964742 + Lx5 LINE L1 2865 4946 -931 4 900 5274 155 9 14 chr17 41307906 41308059 -53964592 + Lx5 LINE L1 5448 5606 -1444 4 900 3366 33 5 0 chr17 41308059 41308453 -53964198 + MTA_Mm LTR MaLR 1 396 0 4 900 5274 241 65 27 chr17 41308453 41309839 -53962812 + Lx5 LINE L1 5607 7047 -3 4 900 1086 318 58 10 chr17 41309861 41310545 -53962106 + L1M2 LINE L1 4397 5113 -1030 4 900 813 311 58 19 chr17 41310610 41310869 -53961782 + B4A SINE B4 24 292 0 4 900 411 21 0 0 chr17 41310927 41310975 -53961676 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 900 3267 189 30 32 chr17 41311002 41311928 -53960723 + L1_Mm LINE L1 4933 5853 -27 4 900 238 265 8 8 chr17 41311996 41312114 -53960537 + (TA)n Simple_repeat Simple_repeat 2 119 0 4 900 333 0 0 0 chr17 41314709 41314746 -53957905 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 900 276 30 0 0 chr17 41314756 41314789 -53957862 + (TC)n Simple_repeat Simple_repeat 2 34 0 4 900 270 0 0 0 chr17 41314789 41314818 -53957833 + (TA)n Simple_repeat Simple_repeat 1 30 0 4 900 216 0 0 0 chr17 41314818 41314841 -53957810 + (GA)n Simple_repeat Simple_repeat 2 25 0 4 900 357 199 28 62 chr17 41314843 41314988 -53957663 + Lx9 LINE L1 7490 7629 -15 4 900 207 0 0 0 chr17 41315461 41315484 -53957167 + (T)n Simple_repeat Simple_repeat 1 23 0 4 900 237 108 0 0 chr17 41315643 41315680 -53956971 + (T)n Simple_repeat Simple_repeat 1 37 0 4 900 1726 62 0 13 chr17 41315680 41315910 -53956741 + L1Md_T LINE L1 6356 6582 0 4 900 843 345 42 10 chr17 41316081 41316394 -53956257 + RCHARR1 DNA MER1_type 8 330 -644 4 900 1867 140 24 57 chr17 41316394 41316727 -53955924 + Lx4A LINE L1 6737 7058 0 4 900 23 0 0 0 chr17 41316727 41316750 -53955901 + AT_rich Low_complexity Low_complexity 1 23 0 4 900 397 273 86 0 chr17 41316819 41316947 -53955704 + RCHARR1 DNA MER1_type 315 453 -521 4 900 530 283 61 34 chr17 41317155 41317535 -53955116 - L1MA4 LINE L1 -370 5930 5410 4 900 803 221 23 32 chr17 41317539 41317759 -53954892 + RCHARR1 DNA MER1_type 757 974 0 4 900 307 291 41 62 chr17 41318117 41318311 -53954340 + L1M4 LINE L1 22 211 -6331 4 900 612 126 0 0 chr17 41320337 41320456 -53952195 + (TC)n Simple_repeat Simple_repeat 2 120 0 4 900 852 305 33 40 chr17 41320620 41320929 -53951722 - MTE2a LTR MaLR -53 366 51 4 900 530 231 83 0 chr17 41320960 41321068 -53951583 + B1_Mur3 SINE Alu 24 140 -9 4 900 1692 156 37 61 chr17 41321101 41321428 -53951223 - ORR1A4 LTR MaLR -10 319 1 4 900 444 202 5 38 chr17 41321428 41321613 -53951038 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 4 900 338 204 11 0 chr17 41321596 41321684 -53950967 + (CATATA)n Simple_repeat Simple_repeat 5 93 0 4 900 2103 144 33 71 chr17 41321752 41322177 -53950474 + RLTR9E LTR ERVK 1 409 0 4 900 7076 86 46 2 chr17 41322759 41323806 -53948845 + Lx3A LINE L1 4314 5406 -480 4 900 1904 110 12 51 chr17 41323806 41324141 -53948510 + RLTRETN_Mm LTR ERVK 1 322 0 5 900 23292 56 13 29 chr17 41324142 41327335 -53945316 + MMETn-int LTR ERVK 2 3141 -1703 5 900 8717 115 8 21 chr17 41327369 41328746 -53943905 + MMETn-int LTR ERVK 3486 4844 0 5 900 1817 123 12 56 chr17 41328746 41329083 -53943568 + RLTRETN_Mm LTR ERVK 1 322 0 5 900 8854 107 23 16 chr17 41329083 41329273 -53943378 + Lx3A LINE L1 5401 5601 -285 4 900 2784 86 105 12 chr17 41329273 41329472 -53943179 + RLTR44B LTR ERVK 1 205 -244 5 900 600 14 0 0 chr17 41329472 41329541 -53943110 + (TG)n Simple_repeat Simple_repeat 1 69 0 5 900 2784 86 105 12 chr17 41329541 41329752 -53942899 + RLTR44B LTR ERVK 206 449 0 5 900 8854 120 23 7 chr17 41329752 41331100 -53941551 + Lx3A LINE L1 5599 6900 -81 4 900 572 325 16 5 chr17 41331663 41331852 -53940799 - B4A SINE B4 -20 272 82 5 900 311 0 0 38 chr17 41331852 41331905 -53940746 - L1_Mus4 LINE L1 -1 6635 6585 5 900 358 290 99 28 chr17 41331909 41332051 -53940600 - B4A SINE B4 -140 152 1 5 900 342 0 0 0 chr17 41332289 41332327 -53940324 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 900 2567 253 84 100 chr17 41332601 41333624 -53939027 + RMER1B Other Other 47 1053 -13 5 900 582 211 0 0 chr17 41334162 41334486 -53938165 + (TG)n Simple_repeat Simple_repeat 1 324 0 5 900 245 218 13 0 chr17 41334521 41334599 -53938052 + (TG)n Simple_repeat Simple_repeat 1 79 0 5 900 597 253 55 160 chr17 41334599 41334924 -53937727 - B4A SINE B4 0 292 2 5 900 387 0 0 0 chr17 41335644 41335687 -53936964 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 900 1160 55 7 0 chr17 41335687 41335832 -53936819 - B1_Mus1 SINE Alu -2 146 1 5 900 2274 109 63 28 chr17 41336246 41336641 -53936010 - RLTR9E LTR ERVK 0 409 1 5 900 227 342 12 12 chr17 41337402 41337482 -53935169 - B4 SINE B4 -206 86 7 5 900 316 321 16 108 chr17 41338502 41338687 -53933964 + MLT1A1 LTR MaLR 31 198 -210 5 900 27 0 0 0 chr17 41339112 41339139 -53933512 + AT_rich Low_complexity Low_complexity 1 27 0 5 900 391 305 82 41 chr17 41339271 41339418 -53933233 - MER105 DNA DNA -49 155 3 5 900 258 347 122 0 chr17 41339537 41339635 -53933016 + MIR SINE MIR 71 180 -82 5 900 1623 209 21 72 chr17 41341064 41341450 -53931201 - ORR1D1 LTR MaLR -8 366 1 5 900 237 392 102 27 chr17 41341520 41341667 -53930984 - MLT1G LTR MaLR -176 415 258 5 900 21 95 0 0 chr17 41343718 41343781 -53928870 + AT_rich Low_complexity Low_complexity 1 63 0 5 900 761 351 14 0 chr17 41344463 41344671 -53927980 + B3 SINE B2 6 216 0 5 900 1802 163 87 82 chr17 41344829 41345243 -53927408 - RMER16 LTR ERVK -5 528 113 5 900 1705 174 229 11 chr17 41345583 41345949 -53926702 - RLTR41 LTR ERV1 0 446 1 5 900 621 105 0 0 chr17 41346038 41346133 -53926518 + (CA)n Simple_repeat Simple_repeat 2 96 0 5 900 333 62 0 0 chr17 41346133 41346181 -53926470 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 900 230 343 0 9 chr17 41346266 41346375 -53926276 + GA-rich Low_complexity Low_complexity 5 112 0 5 900 2081 138 97 18 chr17 41347167 41347565 -53925086 - LTRIS4 LTR ERV1 0 507 24 5 900 243 0 0 0 chr17 41348054 41348081 -53924570 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 900 245 27 54 0 chr17 41348408 41348445 -53924206 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 900 198 143 0 0 chr17 41350158 41350193 -53922458 + (CATA)n Simple_repeat Simple_repeat 2 36 0 5 900 235 246 31 0 chr17 41350412 41350477 -53922174 - L2 LINE L2 -683 2736 2670 5 900 396 281 78 17 chr17 41350884 41351000 -53921651 - MER5A DNA MER1_type 0 189 67 5 900 824 278 35 13 chr17 41351297 41351527 -53921124 + MTD LTR MaLR 1 235 -184 5 900 448 266 70 0 chr17 41351732 41351860 -53920791 + MTD LTR MaLR 283 419 0 5 900 367 353 145 35 chr17 41351937 41352254 -53920397 + L1MC4a LINE L1 6507 6858 -1024 5 900 244 277 187 28 chr17 41352788 41352970 -53919681 + L1MC4a LINE L1 6972 7182 -700 5 900 2860 96 31 18 chr17 41353001 41353445 -53919206 - Lx3A LINE L1 -2 6979 6530 5 900 5356 100 55 9 chr17 41353611 41354461 -53918190 - RMER17D LTR ERVK 0 889 1 5 900 382 287 95 24 chr17 41354501 41354754 -53917897 + L1MC4a LINE L1 7398 7668 -214 5 900 463 269 6 82 chr17 41355819 41356001 -53916650 - L1MB1 LINE L1 0 6168 6001 5 900 207 162 0 0 chr17 41356127 41356164 -53916487 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 900 650 259 44 24 chr17 41356419 41356625 -53916026 - B3 SINE B2 -6 210 1 5 900 1498 143 58 11 chr17 41358373 41358634 -53914017 - Lx2B LINE L1 -7 6993 6721 5 900 3621 144 153 8 chr17 41358635 41359452 -53913199 - Lx2B LINE L1 -266 6734 6007 5 900 3599 62 22 8 chr17 41359468 41359957 -53912694 + LTRIS2 LTR ERV1 69 564 0 5 900 1329 102 5 0 chr17 41359957 41360153 -53912498 - Lx2B LINE L1 -992 6008 5812 5 900 1545 137 8 4 chr17 41360144 41360423 -53912228 + Lx2B LINE L1 5548 5827 -59 5 900 190 279 27 93 chr17 41361049 41361124 -53911527 - L4 LINE RTE -262 1767 1698 5 900 419 321 28 0 chr17 41362421 41362530 -53910121 - B3A SINE B2 -85 113 2 5 900 23 33 0 0 chr17 41362724 41362754 -53909897 + AT_rich Low_complexity Low_complexity 1 30 0 5 900 1089 210 58 39 chr17 41364165 41364477 -53908174 + RMER13B LTR ERVK 465 782 -126 5 900 182 128 0 25 chr17 41365181 41365221 -53907430 + A-rich Low_complexity Low_complexity 4 42 0 5 900 305 190 0 25 chr17 41365316 41365397 -53907254 + Lx9 LINE L1 7490 7568 -76 5 900 2941 145 38 0 chr17 41366403 41366899 -53905752 - Lx2 LINE L1 -2 6995 6481 5 900 2064 40 0 0 chr17 41367088 41367337 -53905314 + L1Md_A LINE L1 6333 6581 -1 5 900 517 257 15 0 chr17 41367789 41367925 -53904726 + Lx9 LINE L1 7325 7462 -182 5 900 312 27 0 0 chr17 41367928 41367965 -53904686 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 900 29 28 0 0 chr17 41368056 41368092 -53904559 + AT_rich Low_complexity Low_complexity 1 36 0 5 900 415 250 0 22 chr17 41368092 41368182 -53904469 - MTE2a LTR MaLR -291 88 1 5 900 3174 99 15 2 chr17 41368791 41369255 -53903396 + Lx LINE L1 6182 6651 -3 5 900 1315 161 0 0 chr17 41369407 41369624 -53903027 - Lx2 LINE L1 -226 6771 6555 5 900 1009 164 34 15 chr17 41369624 41369828 -53902823 + Lx2 LINE L1 6789 6996 -1 5 900 1089 82 0 27 chr17 41369858 41370008 -53902643 + B1_Mus2 SINE Alu 2 147 0 5 900 219 45 43 22 chr17 41370010 41370056 -53902595 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 5 900 429 245 30 0 chr17 41370706 41370848 -53901803 - MER2 DNA MER2_type -48 297 150 5 900 235 211 35 0 chr17 41370889 41370946 -53901705 - MER2 DNA MER2_type -201 144 86 5 900 225 384 0 0 chr17 41371213 41371286 -53901365 - ID4_ SINE ID 0 83 11 5 900 262 203 34 0 chr17 41371313 41371372 -53901279 - MER20 DNA MER1_type -59 160 100 5 900 369 117 0 0 chr17 41371895 41371955 -53900696 + (ATG)n Simple_repeat Simple_repeat 3 62 0 5 900 623 257 221 12 chr17 41372043 41372376 -53900275 + MTD LTR MaLR 18 419 0 5 900 492 18 0 0 chr17 41372376 41372433 -53900218 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 900 1139 151 5 5 chr17 41373247 41373440 -53899211 - B2_Mm2 SINE B2 0 195 3 5 900 237 287 16 65 chr17 41373844 41373967 -53898684 + L1M2 LINE L1 2385 2501 -4348 5 900 256 152 0 0 chr17 41374105 41374151 -53898500 - L1M3c LINE L1 -4321 2528 2483 5 900 348 290 80 44 chr17 41374267 41374543 -53898108 - L1M3c LINE L1 -4573 2206 1911 5 900 1104 69 0 20 chr17 41374543 41374554 -53898097 - B1_Mus2 SINE Alu 0 147 139 5 900 510 17 0 0 chr17 41374554 41374613 -53898038 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 900 1104 69 0 20 chr17 41374613 41374749 -53897902 - B1_Mus2 SINE Alu -9 138 3 5 900 348 249 54 59 chr17 41374749 41374913 -53897738 - L1M3c LINE L1 -4869 1910 1744 5 900 731 180 7 0 chr17 41374940 41375090 -53897561 + CT-rich Low_complexity Low_complexity 2 152 0 5 900 1460 121 19 144 chr17 41376144 41376512 -53896139 - RLTRETN_Mm LTR ERVK 0 322 1 5 900 521 48 0 0 chr17 41376519 41376581 -53896070 + L1Md_T LINE L1 5525 5586 -297 5 900 8389 35 0 0 chr17 41376581 41377577 -53895074 + L1Md_T LINE L1 5587 6582 0 5 900 4844 40 0 0 chr17 41377579 41378158 -53894493 + L1Md_T LINE L1 6004 6582 0 5 900 459 93 6 1 chr17 41378171 41378249 -53894402 - ETnERV2-int LTR ERVK -23 7383 7327 5 900 398 260 266 3 chr17 41378249 41378535 -53894116 - RLTR13D6 LTR ERVK -371 531 171 5 900 9938 145 24 44 chr17 41378536 41380234 -53892417 - ETnERV2-int LTR ERVK -196 7210 5547 5 900 443 100 9 167 chr17 41380248 41380356 -53892295 - RLTRETN_Mm LTR ERVK -231 91 1 5 900 1160 76 0 0 chr17 41380402 41380547 -53892104 + B1_Mm SINE Alu 3 147 0 5 900 2488 120 22 17 chr17 41381224 41381631 -53891020 + RLTR9E LTR ERVK 1 409 0 5 900 2534 88 168 0 chr17 41381917 41382369 -53890282 + RLTR47_MM LTR ERV1 5 532 0 5 900 1591 262 73 36 chr17 41383047 41383615 -53889036 + Lx6 LINE L1 6462 7434 -26 5 900 263 221 12 0 chr17 41384174 41384260 -53888391 + CT-rich Low_complexity Low_complexity 2 88 0 5 900 494 202 49 37 chr17 41384682 41384846 -53887805 - Lx9 LINE L1 -1 7643 7478 5 900 720 35 0 0 chr17 41384847 41384934 -53887717 + (GA)n Simple_repeat Simple_repeat 2 88 0 5 900 885 169 42 0 chr17 41384947 41385113 -53887538 - Lx9 LINE L1 -228 7416 7244 5 900 620 340 60 68 chr17 41385361 41385714 -53886937 + ORR1E LTR MaLR 6 355 -4 5 900 1144 191 120 0 chr17 41386595 41386836 -53885815 + Lx6 LINE L1 6845 7114 -346 5 900 524 185 0 0 chr17 41386841 41386933 -53885718 - RLTR23 LTR ERV1 -338 92 1 5 900 414 0 0 0 chr17 41387613 41387659 -53884992 + (A)n Simple_repeat Simple_repeat 1 46 0 5 900 668 273 129 100 chr17 41387891 41388302 -53884349 - RLTR23 LTR ERV1 0 430 8 5 900 3100 179 29 35 chr17 41388489 41389183 -53883468 + RMER6C LTR ERVK 1 690 0 5 900 295 245 188 96 chr17 41389405 41389641 -53883010 - RLTR41 LTR ERV1 -33 499 259 5 900 1005 85 0 0 chr17 41392794 41392935 -53879716 + (TTC)n Simple_repeat Simple_repeat 2 142 0 5 900 2297 75 75 0 chr17 41392936 41393254 -53879397 - L1_Mus1 LINE L1 -6 6561 6220 5 900 21 36 0 0 chr17 41393757 41393785 -53878866 + AT_rich Low_complexity Low_complexity 1 28 0 5 900 221 244 0 0 chr17 41394049 41394094 -53878557 - RSINE1 SINE B4 -109 56 12 5 900 1251 340 40 38 chr17 41394124 41394808 -53877843 + Lx8 LINE L1 6384 7068 -405 5 900 324 0 0 0 chr17 41394822 41394858 -53877793 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 900 689 314 27 17 chr17 41394971 41395272 -53877379 + L1MD LINE L1 5410 5713 -646 5 900 195 69 0 0 chr17 41395791 41395820 -53876831 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 900 4727 203 86 17 chr17 41396712 41397756 -53874895 + Lx5 LINE L1 5921 7036 -14 5 900 252 0 0 0 chr17 41397757 41397785 -53874866 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 5 900 26 30 0 0 chr17 41397786 41397819 -53874832 + AT_rich Low_complexity Low_complexity 1 33 0 6 900 1643 63 0 9 chr17 41399089 41399312 -53873339 - L1Md_A LINE L1 0 6582 6362 6 900 180 0 0 0 chr17 41399493 41399513 -53873138 + (T)n Simple_repeat Simple_repeat 1 20 0 6 900 924 292 58 56 chr17 41400922 41401492 -53871159 + L1MC LINE L1 4420 4990 -1156 6 900 222 211 0 0 chr17 41402807 41402864 -53869787 + A-rich Low_complexity Low_complexity 1 57 0 6 900 290 307 30 59 chr17 41403062 41403197 -53869454 + MTEb LTR MaLR 240 370 -9 6 900 3078 59 5 3 chr17 41403556 41403947 -53868704 + MTA_Mm LTR MaLR 5 396 0 6 900 224 77 26 0 chr17 41404340 41404379 -53868272 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 900 541 348 44 91 chr17 41404439 41404736 -53867915 - B4 SINE B4 -4 288 6 6 900 6874 109 16 16 chr17 41404855 41405888 -53866763 + Lx LINE L1 5613 6646 -8 6 900 23 86 0 0 chr17 41406184 41406242 -53866409 + AT_rich Low_complexity Low_complexity 1 58 0 6 900 465 136 9 19 chr17 41406496 41406601 -53866050 + (TA)n Simple_repeat Simple_repeat 2 105 0 6 900 3040 52 0 3 chr17 41407265 41407653 -53864998 + L1Md_F2 LINE L1 6196 6582 0 6 900 562 356 8 48 chr17 41408146 41408397 -53864254 + Lx9 LINE L1 6553 6793 -851 6 900 25 0 0 0 chr17 41408778 41408803 -53863848 + AT_rich Low_complexity Low_complexity 1 25 0 6 900 1929 220 77 21 chr17 41408959 41409438 -53863213 - RMER20A LTR ERVK 0 516 11 6 900 8130 46 11 0 chr17 41409644 41411279 -53861372 - L1Md_F2 LINE L1 -1 6581 4929 6 900 5314 81 4 1 chr17 41411253 41411986 -53860665 + L1Md_F2 LINE L1 4175 4909 -974 6 900 2755 82 15 20 chr17 41412245 41412643 -53860008 - MTA_Mm LTR MaLR 0 396 1 6 900 560 343 10 56 chr17 41413088 41413391 -53859260 + B4A SINE B4 4 292 0 6 900 207 100 0 0 chr17 41413430 41413460 -53859191 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 900 405 326 58 15 chr17 41413462 41413599 -53859052 - B3A SINE B2 -46 152 10 6 900 8655 121 26 11 chr17 41414137 41414152 -53858499 - Lx3A LINE L1 0 6981 6969 6 900 207 0 0 0 chr17 41414152 41414175 -53858476 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 900 8655 121 26 11 chr17 41414175 41414646 -53858005 - Lx3A LINE L1 -13 6968 6479 6 900 720 111 0 0 chr17 41414646 41414754 -53857897 + (TAG)n Simple_repeat Simple_repeat 3 110 0 6 900 8655 128 12 59 chr17 41414754 41416401 -53856250 - Lx3A LINE L1 -503 6478 4927 6 900 223 113 0 159 chr17 41416401 41416464 -53856187 - B1_Mus2 SINE Alu 0 147 95 6 900 354 186 0 0 chr17 41416431 41416490 -53856161 - B1_Mus1 SINE Alu -88 60 2 6 900 8655 128 12 59 chr17 41416490 41416901 -53855750 - Lx3A LINE L1 -503 4926 4538 6 900 1715 163 39 19 chr17 41416899 41417211 -53855440 - Lx5 LINE L1 -622 6428 6111 6 900 1952 111 54 0 chr17 41417378 41417676 -53854975 - RLTR13C1 LTR ERVK 0 983 670 6 900 25 75 0 0 chr17 41417834 41417887 -53854764 + AT_rich Low_complexity Low_complexity 1 53 0 6 900 734 370 86 60 chr17 41417896 41418259 -53854392 - Lx8 LINE L1 -8 7465 7075 6 112 7210 104 6 7 chr17 41418259 41419283 -53853368 + RLTR13D5 LTR ERVK 1 1023 0 6 901 734 370 86 60 chr17 41419283 41419846 -53852805 - Lx8 LINE L1 -399 7074 6515 6 901 279 0 0 0 chr17 41419872 41419903 -53852748 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 901 412 320 132 54 chr17 41421592 41421740 -53850911 + LTR52 LTR ERVL 12 162 -259 6 901 2918 91 27 12 chr17 41421740 41422141 -53850510 - MTB_Mm LTR MaLR 0 407 1 6 901 412 320 132 54 chr17 41422141 41422250 -53850401 + LTR52 LTR ERVL 163 289 -132 6 901 2834 95 8 2 chr17 41422267 41422669 -53849982 - L1_Mus2 LINE L1 0 6566 6163 6 901 971 72 111 0 chr17 41422671 41422824 -53849827 + MusHAL1 LINE L1 1804 1973 -739 6 901 879 318 84 71 chr17 41424394 41425306 -53847345 + L1MC3 LINE L1 6778 7701 -84 6 901 387 0 0 0 chr17 41425328 41425371 -53847280 + (T)n Simple_repeat Simple_repeat 1 43 0 6 901 5457 80 25 0 chr17 41426670 41427404 -53845247 + L1Md_F2 LINE L1 5819 6570 -12 6 901 3247 112 4 12 chr17 41427417 41427896 -53844755 + MT2C_Mm LTR ERVL 1 475 0 6 901 21 82 0 0 chr17 41427925 41427974 -53844677 + AT_rich Low_complexity Low_complexity 1 49 0 6 901 285 247 22 0 chr17 41428089 41428178 -53844473 + Lx9 LINE L1 7534 7624 -20 6 901 24 53 0 0 chr17 41428636 41428674 -53843977 + AT_rich Low_complexity Low_complexity 1 38 0 6 901 397 283 34 50 chr17 41428729 41428848 -53843803 - RSINE1 SINE B4 -7 158 42 6 901 319 272 199 58 chr17 41428955 41429216 -53843435 + Lx8 LINE L1 7165 7462 -11 6 901 1867 152 67 17 chr17 41429216 41429572 -53843079 + Lx2B LINE L1 6622 6995 -5 6 901 238 255 71 118 chr17 41431335 41431504 -53841147 - Lx8 LINE L1 -9 7464 7304 6 901 867 318 17 36 chr17 41431572 41431928 -53840723 - Lx6 LINE L1 -27 7433 7085 6 901 429 298 35 17 chr17 41431930 41432104 -53840547 + RLTR15 LTR ERVK 120 296 -63 6 901 343 281 172 29 chr17 41432190 41432399 -53840252 - Lx8 LINE L1 -3 7470 7232 6 901 690 335 31 117 chr17 41432403 41433086 -53839565 + Lx8 LINE L1 6617 7240 -233 6 901 705 126 0 0 chr17 41434243 41434354 -53838297 + (GAA)n Simple_repeat Simple_repeat 3 113 0 6 901 294 87 0 0 chr17 41434631 41434677 -53837974 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 6 901 330 45 0 0 chr17 41435097 41435141 -53837510 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 6 901 279 157 0 0 chr17 41435213 41435264 -53837387 + GA-rich Low_complexity Low_complexity 1 51 0 6 901 1913 180 119 57 chr17 41435272 41435901 -53836750 + RMER16-int LTR ERVK 461 1617 -5789 6 901 283 172 16 49 chr17 41436412 41436473 -53836178 + RLTR9A LTR ERVK 1 59 -309 6 901 333 217 8 111 chr17 41436570 41436697 -53835954 + RLTR9E LTR ERVK 264 385 -24 6 901 1364 195 47 4 chr17 41437409 41437667 -53834984 - MTC LTR MaLR -8 413 145 6 901 24 32 0 0 chr17 41437803 41437834 -53834817 + AT_rich Low_complexity Low_complexity 1 31 0 6 901 272 188 83 0 chr17 41437869 41437917 -53834734 - B3 SINE B2 -86 130 79 6 901 686 205 8 8 chr17 41437937 41438065 -53834586 - MTC LTR MaLR -276 145 18 6 901 262 221 0 13 chr17 41438069 41438147 -53834504 + (CAA)n Simple_repeat Simple_repeat 2 78 0 6 901 25 31 0 0 chr17 41438314 41438346 -53834305 + AT_rich Low_complexity Low_complexity 1 32 0 6 901 1428 182 4 4 chr17 41438346 41438599 -53834052 - Lx4A LINE L1 -1 7057 6805 6 901 1066 188 26 13 chr17 41438599 41438826 -53833825 - Lx4A LINE L1 -973 6085 5856 6 901 360 0 0 0 chr17 41438860 41438900 -53833751 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 901 271 269 100 18 chr17 41439134 41439244 -53833407 - PB1D7 SINE Alu 0 120 2 6 901 1955 319 67 38 chr17 41440078 41441186 -53831465 + Lx9 LINE L1 6504 7643 -1 6 901 3298 185 51 67 chr17 41441306 41442066 -53830585 + RLTR40 LTR ERVK 14 761 -56 6 901 239 247 10 20 chr17 41442141 41442240 -53830411 + (CA)n Simple_repeat Simple_repeat 2 99 0 6 901 847 227 81 9 chr17 41442240 41442462 -53830189 + RLTR40 LTR ERVK 566 803 -14 6 901 4391 14 2 0 chr17 41442490 41442982 -53829669 + MT2_Mm LTR ERVL 1 493 0 6 901 40418 17 14 0 chr17 41442982 41448269 -53824382 + MERVL-int LTR ERVL 1 5360 -125 6 901 393 167 46 35 chr17 41448269 41448356 -53824295 + ORR1A3-int LTR MaLR 553 640 -1323 6 901 314 0 0 0 chr17 41448356 41448394 -53824257 + MERVL-int LTR ERVL 5448 5485 0 6 901 4391 14 2 0 chr17 41448394 41448886 -53823765 + MT2_Mm LTR ERVL 1 493 0 6 901 751 317 86 49 chr17 41449088 41449494 -53823157 - MTE2a LTR MaLR 0 419 1 6 901 245 379 17 25 chr17 41449772 41449891 -53822760 + RSINE1 SINE B4 4 121 -44 6 901 594 0 0 0 chr17 41449962 41450028 -53822623 + (TC)n Simple_repeat Simple_repeat 1 66 0 6 901 7236 61 3 12 chr17 41450048 41450949 -53821702 + RLTR13B1 LTR ERVK 1 893 0 6 901 185 128 21 0 chr17 41450992 41451039 -53821612 + (TA)n Simple_repeat Simple_repeat 1 48 0 6 901 23 0 0 0 chr17 41451039 41451062 -53821589 + AT_rich Low_complexity Low_complexity 1 23 0 6 901 1171 272 76 9 chr17 41451117 41451433 -53821218 - MTC LTR MaLR -2 419 83 6 901 342 67 0 0 chr17 41451439 41451484 -53821167 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 6 901 938 128 74 0 chr17 41451485 41451633 -53821018 - B2_Mm2 SINE B2 -35 160 2 6 901 337 195 0 109 chr17 41451629 41451646 -53821005 - MTC LTR MaLR -309 112 99 6 901 5710 45 1 1 chr17 41451646 41452354 -53820297 - L1Md_F3 LINE L1 -14 6570 5863 6 901 337 195 0 109 chr17 41452354 41452428 -53820223 - MTC LTR MaLR -323 98 31 6 901 29 47 0 0 chr17 41452636 41452679 -53819972 + AT_rich Low_complexity Low_complexity 1 43 0 6 901 390 159 0 0 chr17 41453012 41453081 -53819570 + (CA)n Simple_repeat Simple_repeat 2 70 0 6 901 384 203 54 0 chr17 41453976 41454050 -53818601 - Lx9 LINE L1 -1200 6444 6367 6 901 239 272 0 32 chr17 41454049 41454144 -53818507 + Lx9 LINE L1 7528 7619 -25 6 901 309 26 0 0 chr17 41454146 41454184 -53818467 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 901 3451 120 6 20 chr17 41454655 41455165 -53817486 + MERVK26-int LTR ERVK 5994 6496 -423 6 901 321 274 58 10 chr17 41455634 41455737 -53816914 - PB1D9 SINE Alu 0 120 13 6 901 22 0 0 0 chr17 41456460 41456482 -53816169 + AT_rich Low_complexity Low_complexity 1 22 0 6 901 189 74 0 0 chr17 41456573 41456600 -53816051 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 901 267 283 54 54 chr17 41456655 41456767 -53815884 - MIRb SINE MIR -103 165 54 6 901 180 0 0 0 chr17 41458024 41458044 -53814607 + (CAAAAA)n Simple_repeat Simple_repeat 2 21 0 6 901 10002 25 3 0 chr17 41458124 41459964 -53812687 - L1Md_T LINE L1 0 6582 4735 6 901 2951 26 0 0 chr17 41459953 41460303 -53812348 + L1_Mm LINE L1 2694 3043 -2840 6 901 870 288 150 9 chr17 41460309 41460649 -53812002 - MTD LTR MaLR -14 405 18 6 901 405 0 0 0 chr17 41461164 41461209 -53811442 + (TC)n Simple_repeat Simple_repeat 2 46 0 6 901 207 0 0 0 chr17 41461209 41461231 -53811420 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 901 1164 69 0 0 chr17 41461664 41461809 -53810842 + B1_Mm SINE Alu 2 146 -1 6 901 911 345 29 14 chr17 41463417 41463767 -53808884 + ORR1E LTR MaLR 3 357 -2 6 901 1855 216 41 0 chr17 41463877 41464290 -53808361 - L1_Mur2 LINE L1 -678 5199 4770 6 901 7059 98 36 7 chr17 41464340 41465642 -53807009 - L1_Mus4 LINE L1 -5 6631 5298 7 901 8204 108 17 0 chr17 41465620 41467639 -53805012 - L1VL4 LINE L1 -1469 2090 37 7 901 1053 295 29 12 chr17 41467699 41468042 -53804609 + Lx6 LINE L1 7104 7452 -8 7 901 731 245 71 14 chr17 41468089 41468300 -53804351 - RCHARR1 DNA MER1_type -3 971 749 7 901 1319 278 34 16 chr17 41468301 41468459 -53804192 - RCHARR1 DNA MER1_type -508 466 304 7 901 327 65 0 0 chr17 41468459 41468505 -53804146 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 901 1319 278 34 16 chr17 41468505 41468726 -53803925 - RCHARR1 DNA MER1_type -671 303 81 7 901 6325 65 7 5 chr17 41468734 41469540 -53803111 + RLTR13C2 LTR ERVK 1 808 0 7 901 242 275 63 0 chr17 41469838 41469922 -53802729 - PB1 SINE Alu -19 108 42 7 901 465 97 0 0 chr17 41469997 41470069 -53802582 + (GAAA)n Simple_repeat Simple_repeat 2 73 0 7 901 580 306 115 24 chr17 41470287 41470739 -53801912 - L1MB2 LINE L1 -19 6152 5660 7 901 25 31 0 0 chr17 41470779 41470811 -53801840 + AT_rich Low_complexity Low_complexity 1 32 0 7 901 435 241 0 47 chr17 41472223 41472371 -53800280 + Lx6 LINE L1 7286 7426 -34 7 901 944 18 0 9 chr17 41472371 41472486 -53800165 + (GAA)n Simple_repeat Simple_repeat 3 116 0 7 901 1990 187 103 12 chr17 41474945 41475428 -53797223 - RLTR11A2 LTR ERVK 0 527 1 7 901 516 362 55 65 chr17 41476405 41476445 -53796206 - B4A SINE B4 -2 290 259 7 901 252 86 0 0 chr17 41476445 41476480 -53796171 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 901 516 362 55 65 chr17 41476480 41476729 -53795922 - B4A SINE B4 -34 258 4 7 901 372 125 0 0 chr17 41476887 41476951 -53795700 + (TG)n Simple_repeat Simple_repeat 1 64 0 7 901 357 311 0 0 chr17 41476986 41477089 -53795562 + (TG)n Simple_repeat Simple_repeat 1 103 0 7 901 231 186 0 0 chr17 41477088 41477131 -53795520 + GA-rich Low_complexity Low_complexity 1 43 0 7 901 414 39 0 0 chr17 41477135 41477187 -53795464 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 901 311 78 20 0 chr17 41477342 41477393 -53795258 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 7 901 1201 153 18 13 chr17 41477393 41477618 -53795033 - Lx2 LINE L1 -2 6995 6770 7 901 6891 123 20 13 chr17 41477627 41478720 -53793931 - Lx2 LINE L1 -365 6632 5537 7 901 22 35 0 0 chr17 41479295 41479324 -53793327 + AT_rich Low_complexity Low_complexity 1 29 0 7 901 401 381 0 0 chr17 41479919 41480058 -53792593 + ID_B1 SINE B4 82 220 -4 7 901 248 309 95 0 chr17 41480269 41480366 -53792285 + PB1D7 SINE Alu 15 119 -1 7 901 750 210 62 62 chr17 41480502 41480520 -53792131 - B3 SINE B2 -37 179 166 7 901 306 0 0 0 chr17 41480520 41480554 -53792097 + (TTA)n Simple_repeat Simple_repeat 3 36 0 7 901 1080 114 7 0 chr17 41480554 41480713 -53791938 - B2_Mm1t SINE B2 -51 165 2 7 901 449 115 0 13 chr17 41481596 41481675 -53790976 + (CA)n Simple_repeat Simple_repeat 1 78 0 7 901 287 306 7 65 chr17 41481675 41481738 -53790913 + RMER17D2 LTR ERVK 412 473 -336 7 901 315 0 0 0 chr17 41481738 41481773 -53790878 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 901 287 306 7 65 chr17 41481773 41481855 -53790796 + RMER17D2 LTR ERVK 474 548 -261 7 901 2762 39 0 0 chr17 41481881 41482219 -53790432 - ORR1A1 LTR MaLR -8 338 1 7 901 356 109 0 0 chr17 41482683 41482738 -53789913 + B1_Mus1 SINE Alu 1 55 -93 7 901 307 211 0 95 chr17 41482738 41482767 -53789884 + ID_B1 SINE B4 82 157 -67 7 901 233 367 0 0 chr17 41484619 41484698 -53787953 - ID4_ SINE ID -3 80 2 7 901 343 341 74 9 chr17 41484923 41485017 -53787634 + Lx8 LINE L1 7244 7341 -132 7 901 321 68 0 0 chr17 41485017 41485061 -53787590 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 7 901 343 341 74 9 chr17 41485061 41485182 -53787469 + Lx8 LINE L1 7342 7472 -1 7 901 233 273 148 0 chr17 41485186 41485274 -53787377 + Lx8 LINE L1 6864 6964 -732 7 901 388 352 37 10 chr17 41485300 41485531 -53787120 + Lx8 LINE L1 7050 7296 -400 7 901 937 237 46 0 chr17 41485634 41485828 -53786823 + Lx5 LINE L1 6706 6908 -142 7 901 477 346 74 29 chr17 41485828 41486072 -53786579 + MER77 LTR ERVL 340 594 -13 7 901 195 42 0 0 chr17 41486513 41486537 -53786114 + (TTTTA)n Simple_repeat Simple_repeat 5 28 0 7 901 1053 201 33 9 chr17 41486537 41486748 -53785903 - B3 SINE B2 0 216 1 7 901 1536 233 57 14 chr17 41487054 41487472 -53785179 + Lx9 LINE L1 7208 7643 -1 7 901 443 70 11 32 chr17 41487785 41487871 -53784780 - L1Md_Gf LINE L1 -5467 1055 996 7 901 252 366 10 19 chr17 41488007 41488110 -53784541 - LTR33A LTR ERVL -80 440 339 7 901 21 36 0 0 chr17 41488589 41488617 -53784034 + AT_rich Low_complexity Low_complexity 1 28 0 7 901 4179 186 17 7 chr17 41488802 41489614 -53783037 + Lx4B LINE L1 6239 7058 0 7 901 24 0 0 0 chr17 41489822 41489846 -53782805 + AT_rich Low_complexity Low_complexity 1 24 0 7 901 247 265 0 0 chr17 41489944 41490027 -53782624 + Lx9 LINE L1 7553 7635 -9 7 901 690 120 0 0 chr17 41490794 41490894 -53781757 - L1_Mus3 LINE L1 -107 6531 6432 7 901 531 273 16 67 chr17 41490894 41491277 -53781374 - RMER17C LTR ERVK -56 354 3 7 901 3840 85 2 20 chr17 41491487 41492029 -53780622 - L1_Mus2 LINE L1 -3 6563 6032 7 901 423 0 0 0 chr17 41492296 41492343 -53780308 + (TC)n Simple_repeat Simple_repeat 2 48 0 7 901 264 30 0 0 chr17 41492344 41492377 -53780274 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 7 901 306 0 0 0 chr17 41493259 41493293 -53779358 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 7 901 1130 320 25 22 chr17 41493665 41494023 -53778628 - MTE2b LTR MaLR -20 359 1 7 901 22 0 0 0 chr17 41494054 41494076 -53778575 + AT_rich Low_complexity Low_complexity 1 22 0 7 901 500 352 54 33 chr17 41494610 41494886 -53777765 - RMER15 LTR ERVL -18 557 276 7 901 2009 295 37 52 chr17 41494997 41495788 -53776863 - RMER15-int LTR ERVL -2 4997 4219 7 901 1695 335 40 53 chr17 41495797 41496072 -53776579 - RMER15-int LTR ERVL -1054 3945 3695 7 901 717 45 0 0 chr17 41496072 41496161 -53776490 + (TTTC)n Simple_repeat Simple_repeat 2 90 0 7 901 1099 97 0 0 chr17 41496161 41496305 -53776346 - B1_Mus2 SINE Alu -1 146 3 7 901 1695 335 40 53 chr17 41496305 41496965 -53775686 - RMER15-int LTR ERVL -1305 3694 3023 7 901 706 262 58 12 chr17 41497061 41497335 -53775316 + Lx9 LINE L1 5602 5922 -1722 7 901 958 247 128 27 chr17 41497429 41497725 -53774926 + ORR1D1 LTR MaLR 1 326 -48 7 901 5690 118 12 15 chr17 41497729 41498646 -53774005 - Lx LINE L1 -3 6651 5738 7 901 332 335 56 23 chr17 41498919 41499150 -53773501 + L1M5 LINE L1 4164 4400 -1746 7 901 962 180 74 10 chr17 41499222 41499424 -53773227 - Lx9 LINE L1 -458 7186 6972 7 901 1076 210 142 3 chr17 41499426 41499765 -53772886 + Lx9 LINE L1 7252 7637 -7 7 901 201 246 0 0 chr17 41499765 41499826 -53772825 + A-rich Low_complexity Low_complexity 1 61 0 7 901 392 237 28 35 chr17 41499834 41499978 -53772673 + L1M5 LINE L1 4525 4667 -1479 7 901 279 0 0 0 chr17 41500501 41500532 -53772119 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 901 227 191 16 0 chr17 41500532 41500595 -53772056 + (TA)n Simple_repeat Simple_repeat 1 64 0 2 901 6629 92 97 5 chr17 41501108 41502532 -53770119 + L1VL1 LINE L1 218 1771 -4112 3 901 708 127 17 17 chr17 41502969 41503089 -53769562 - PB1D9 SINE Alu 0 120 1 4 901 1104 205 128 39 chr17 41503251 41503556 -53769095 - IAPEY3_LTR LTR ERVK 0 332 1 5 901 2987 32 0 0 chr17 41503684 41504030 -53768621 - ORR1A0 LTR MaLR 0 346 1 6 901 2574 110 2 95 chr17 41504065 41504507 -53768144 - RLTR9D LTR ERVK -2 401 1 7 901 22 35 0 0 chr17 41505035 41505064 -53767587 + AT_rich Low_complexity Low_complexity 1 29 0 8 901 181 111 0 0 chr17 41505180 41505207 -53767444 - L3 LINE CR1 -1907 2582 2556 9 901 824 205 86 11 chr17 41505375 41505562 -53767089 - ORR1C1 LTR MaLR -173 205 5 1 901 274 305 40 46 chr17 41506050 41506225 -53766426 + Tigger7 DNA MER2_type 2190 2363 -128 1 901 1290 99 22 0 chr17 41506386 41506568 -53766083 + B2_Mm2 SINE B2 2 187 -8 1 901 1104 72 18 6 chr17 41506694 41506862 -53765789 - L1_Mus3 LINE L1 -7 6631 6462 1 901 31 26 0 0 chr17 41506919 41506957 -53765694 + AT_rich Low_complexity Low_complexity 1 38 0 1 901 29 47 0 0 chr17 41507124 41507167 -53765484 + AT_rich Low_complexity Low_complexity 1 43 0 1 901 3612 256 45 15 chr17 41507633 41508560 -53764091 + Lx6 LINE L1 6506 7460 0 1 901 1209 48 7 0 chr17 41508636 41508782 -53763869 + B1_Mus1 SINE Alu 2 148 0 1 901 709 144 8 8 chr17 41508808 41508941 -53763710 + GA-rich Low_complexity Low_complexity 2 134 0 1 901 431 139 323 0 chr17 41510532 41510628 -53762023 + Lx4B LINE L1 6192 6318 -740 1 901 256 208 40 53 chr17 41511427 41511503 -53761148 + L1MA4 LINE L1 5480 5554 -743 2 901 320 272 28 56 chr17 41511712 41511801 -53760850 + L1MA4 LINE L1 5787 5876 -424 2 901 3025 66 2 17 chr17 41511801 41512203 -53760448 + MTA_Mm LTR MaLR 1 396 0 2 901 320 272 28 56 chr17 41512203 41512257 -53760394 + L1MA4 LINE L1 5877 5925 -375 2 901 200 59 0 29 chr17 41512579 41512614 -53760037 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 901 3916 62 6 6 chr17 41512651 41513167 -53759484 + L1_Mus2 LINE L1 6048 6563 -3 2 901 747 87 0 0 chr17 41513503 41513607 -53759044 + (TTTC)n Simple_repeat Simple_repeat 2 105 0 2 901 305 268 10 104 chr17 41513857 41513953 -53758698 + ID4_ SINE ID 5 91 -61 2 901 354 205 90 0 chr17 41514541 41514619 -53758032 - MTC LTR MaLR 0 421 337 2 901 1737 182 75 23 chr17 41514619 41514817 -53757834 - ORR1B2 LTR MaLR 0 367 153 2 901 320 0 25 0 chr17 41514817 41514857 -53757794 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 901 1737 182 75 23 chr17 41514857 41515007 -53757644 - ORR1B2 LTR MaLR -215 152 2 2 901 1837 198 24 3 chr17 41515007 41515341 -53757310 - MTC LTR MaLR -80 341 1 2 901 2002 261 76 87 chr17 41515548 41515854 -53756797 - Lx7 LINE L1 -174 7522 7183 2 901 1686 90 142 4 chr17 41515854 41516121 -53756530 - Lx3_Mus LINE L1 -8 7001 6698 3 901 2002 261 76 87 chr17 41516121 41516420 -53756231 - Lx7 LINE L1 -514 7182 6917 2 901 7035 47 1 2 chr17 41516420 41517290 -53755361 + L1Md_F2 LINE L1 5711 6579 -3 3 901 2002 261 76 87 chr17 41517290 41517481 -53755170 - Lx7 LINE L1 -780 6916 6734 2 901 1553 201 34 0 chr17 41517481 41517805 -53754846 + L1_Mur3 LINE L1 4634 4968 -912 3 901 898 275 53 93 chr17 41517865 41518390 -53754261 - Lx7 LINE L1 0 7696 7193 3 901 24 53 0 0 chr17 41518395 41518433 -53754218 + AT_rich Low_complexity Low_complexity 1 38 0 3 901 1119 62 0 0 chr17 41518699 41518843 -53753808 - B1_Mus2 SINE Alu -2 145 2 3 901 512 339 21 5 chr17 41519156 41519346 -53753305 + B3A SINE B2 2 194 -4 3 901 1101 277 97 70 chr17 41519476 41520051 -53752600 - Lx8 LINE L1 -461 7012 6422 3 901 547 296 80 26 chr17 41521302 41521518 -53751133 - MLT2B1 LTR ERVL -234 230 1 3 901 33661 82 8 6 chr17 41521575 41527076 -53745575 - L1Md_F2 LINE L1 -14 6571 1062 3 901 5821 59 26 29 chr17 41527075 41527808 -53744843 + L1Md_F2 LINE L1 338 1076 -5446 3 901 3485 28 0 0 chr17 41527808 41528204 -53744447 - MTA_Mm LTR MaLR 0 396 1 4 901 9370 15 18 1 chr17 41528204 41529284 -53743367 - MTA_Mm-int LTR MaLR 0 1098 1 4 901 3450 30 0 0 chr17 41529284 41529680 -53742971 - MTA_Mm LTR MaLR 0 396 1 4 901 34923 43 2 1 chr17 41529680 41534097 -53738554 + L1Md_T LINE L1 1077 5589 -297 3 901 8336 37 0 2 chr17 41534097 41535095 -53737556 + L1Md_T LINE L1 5590 6585 0 3 901 2745 234 22 12 chr17 41535098 41535782 -53736869 - L1Md_F2 LINE L1 -5651 1076 386 3 901 224 120 20 0 chr17 41536424 41536474 -53736177 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 901 22 0 0 0 chr17 41536800 41536822 -53735829 + AT_rich Low_complexity Low_complexity 1 22 0 4 901 242 229 0 0 chr17 41538092 41538140 -53734511 + (TATATG)n Simple_repeat Simple_repeat 1 48 0 4 901 282 95 0 0 chr17 41538141 41538183 -53734468 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 4 901 23 33 0 0 chr17 41540447 41540477 -53732174 + AT_rich Low_complexity Low_complexity 1 30 0 4 901 2025 174 17 62 chr17 41540530 41540935 -53731716 - ORR1B1 LTR MaLR -7 387 1 4 901 345 346 203 17 chr17 41540994 41541226 -53731425 - B4 SINE B4 -11 281 7 4 901 303 283 23 40 chr17 41541232 41541405 -53731246 - L1M2 LINE L1 -979 5164 4995 4 901 1061 223 209 10 chr17 41541584 41542001 -53730650 + Lx7 LINE L1 6821 7320 -376 4 901 691 163 243 28 chr17 41542135 41542312 -53730339 + B3 SINE B2 1 215 -1 5 901 236 185 56 0 chr17 41542335 41542389 -53730262 + T-rich Low_complexity Low_complexity 2 58 0 5 901 1227 188 81 157 chr17 41542419 41542828 -53729823 - ORR1B2 LTR MaLR 0 378 1 5 901 185 183 17 0 chr17 41543278 41543338 -53729313 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 901 1193 225 82 56 chr17 41543411 41543507 -53729144 - Lx9 LINE L1 -121 7523 7425 5 901 261 0 0 0 chr17 41543507 41543536 -53729115 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 901 465 19 0 0 chr17 41543536 41543589 -53729062 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 901 1193 225 82 56 chr17 41543589 41543882 -53728769 - Lx9 LINE L1 -220 7424 7124 5 901 228 139 0 0 chr17 41543894 41543930 -53728721 + RMER6D LTR ERVK 1 36 -684 5 901 1323 292 9 6 chr17 41543985 41544305 -53728346 - MTD LTR MaLR -98 321 1 5 901 387 248 78 92 chr17 41544331 41544602 -53728049 + L1_Rod LINE L1 1245 1511 -4336 5 901 284 262 8 23 chr17 41544704 41544741 -53727910 + (TA)n Simple_repeat Simple_repeat 2 37 0 6 901 875 103 7 0 chr17 41544741 41544896 -53727755 + (TCTA)n Simple_repeat Simple_repeat 1 156 0 6 901 284 262 8 23 chr17 41544896 41544987 -53727664 + (TA)n Simple_repeat Simple_repeat 1 91 0 6 901 3541 75 4 8 chr17 41545063 41545548 -53727103 - L1_Mus1 LINE L1 -1 6566 6084 6 112 32579 83 5 13 chr17 41546556 41551765 -53720886 + L1Md_F3 LINE L1 422 5586 -297 6 902 7876 55 4 1 chr17 41551765 41552758 -53719893 + L1Md_F3 LINE L1 5587 6582 -2 6 902 306 318 100 8 chr17 41552833 41552963 -53719688 + L1M5 LINE L1 2650 2791 -3355 6 902 3404 136 19 16 chr17 41553020 41553634 -53719017 - L1_Mur2 LINE L1 -2164 3713 3098 6 902 583 323 59 10 chr17 41553632 41553835 -53718816 - Lx5 LINE L1 -408 6642 6455 6 902 522 31 0 0 chr17 41553835 41553899 -53718752 + (TCTA)n Simple_repeat Simple_repeat 3 66 0 6 902 522 321 75 12 chr17 41553899 41554008 -53718643 - Lx5 LINE L1 -708 6752 6629 6 902 409 248 24 16 chr17 41554231 41554354 -53718297 + Lx6 LINE L1 6429 6552 -908 6 902 4121 99 44 9 chr17 41554360 41555159 -53717492 - RLTR13A3 LTR ERVK 0 855 1 7 902 2545 263 110 22 chr17 41555162 41555989 -53716662 + Lx6 LINE L1 6557 7456 -4 6 902 352 318 82 79 chr17 41556933 41557210 -53715441 - L1MA6 LINE L1 -150 6162 5901 7 902 435 323 54 0 chr17 41557210 41557377 -53715274 - B3A SINE B2 -18 180 5 7 902 452 318 85 48 chr17 41557377 41557999 -53714652 - L1MA6 LINE L1 -396 5904 5260 7 902 298 266 0 3 chr17 41558114 41558207 -53714444 + L1M5 LINE L1 4774 4865 -1281 6 902 1728 220 106 29 chr17 41558476 41559647 -53713004 + L1_Mur3 LINE L1 63 1365 -4515 7 902 3022 237 87 20 chr17 41559657 41560517 -53712134 + Lx7 LINE L1 5587 6504 -1192 7 902 3598 96 0 0 chr17 41560513 41561062 -53711589 - L1_Mus3 LINE L1 -562 6076 5528 7 902 3424 112 41 24 chr17 41561064 41561604 -53711047 + L1_Mus3 LINE L1 6090 6638 0 7 902 1412 231 105 28 chr17 41561610 41562002 -53710649 + Lx6 LINE L1 6481 6902 -558 7 902 370 246 77 74 chr17 41562035 41562232 -53710419 + Lx7 LINE L1 7295 7456 -4 7 902 319 397 60 0 chr17 41562257 41562441 -53710210 - L1M5 LINE L1 -1199 4947 4753 7 902 304 189 61 26 chr17 41562587 41562701 -53709950 - Lx9 LINE L1 -3 7641 7524 7 902 270 0 0 0 chr17 41562702 41562732 -53709919 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 902 1527 238 55 36 chr17 41562746 41563186 -53709465 - Lx9 LINE L1 -183 7461 7014 7 902 336 404 7 0 chr17 41563340 41563486 -53709165 - RSINE1 SINE B4 -16 149 3 8 902 21 0 0 0 chr17 41563944 41563965 -53708686 + AT_rich Low_complexity Low_complexity 1 21 0 8 902 1048 107 0 0 chr17 41563976 41564116 -53708535 + B1_Mm SINE Alu 3 142 -5 8 902 484 293 136 4 chr17 41564257 41564514 -53708137 - L1MC2 LINE L1 -7 6337 6047 8 902 774 201 0 20 chr17 41565769 41565916 -53706735 + B1_Mur4 SINE Alu 1 144 -6 8 902 273 264 107 39 chr17 41565961 41566166 -53706485 + Lx9 LINE L1 7383 7601 -43 8 902 26 0 0 0 chr17 41566885 41566911 -53705740 + AT_rich Low_complexity Low_complexity 1 26 0 8 902 697 219 94 25 chr17 41566914 41567144 -53705507 - Lx6 LINE L1 -164 7296 7054 8 902 4566 106 14 127 chr17 41567203 41568061 -53704590 - Lx2A LINE L1 -6 7002 6242 8 902 229 335 83 44 chr17 41568397 41568578 -53704073 + MLT1A0 LTR MaLR 8 195 -170 8 902 378 0 0 0 chr17 41568632 41568674 -53703977 + (CA)n Simple_repeat Simple_repeat 2 43 0 9 902 1130 258 12 4 chr17 41568913 41569162 -53703489 + Lx6 LINE L1 6249 6499 -961 9 902 1925 273 125 84 chr17 41569217 41570445 -53702206 - RMER12 LTR ERVK -44 1278 1 9 902 3790 252 48 16 chr17 41570477 41571368 -53701283 + Lx6 LINE L1 6494 7413 -47 9 902 288 252 29 57 chr17 41571620 41571725 -53700926 + MTE2a LTR MaLR 276 377 -2 9 902 3254 66 2 0 chr17 41571953 41572441 -53700210 - L1Md_F2 LINE L1 -583 5999 5511 9 902 4055 102 7 7 chr17 41572441 41573040 -53699611 + L1Md_F2 LINE L1 5980 6578 -4 9 902 5259 21 0 0 chr17 41574299 41574908 -53697743 + L1Md_F2 LINE L1 4978 5586 -297 9 902 7962 48 1 11 chr17 41574908 41575914 -53696737 + L1Md_F2 LINE L1 5587 6582 0 9 902 226 151 127 36 chr17 41576579 41576634 -53696017 - MTEb LTR MaLR -15 364 305 9 902 252 0 0 0 chr17 41578250 41578278 -53694373 + (A)n Simple_repeat Simple_repeat 1 28 0 9 902 4434 225 18 24 chr17 41578427 41579364 -53693287 - Lx5 LINE L1 -3 7047 6116 9 902 279 79 0 0 chr17 41579945 41579983 -53692668 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 9 902 10975 160 26 15 chr17 41580591 41583128 -53689523 + Lx LINE L1 3814 6345 -309 1 902 618 39 0 0 chr17 41583128 41583205 -53689446 + (CCA)n Simple_repeat Simple_repeat 1 77 0 1 902 5946 145 58 6 chr17 41583205 41583464 -53689187 + Lx LINE L1 6346 6653 -1 1 902 184 77 25 25 chr17 41583656 41583696 -53688955 + (TCTA)n Simple_repeat Simple_repeat 2 41 0 1 902 22 0 0 0 chr17 41583813 41583835 -53688816 + AT_rich Low_complexity Low_complexity 1 22 0 1 902 2918 174 48 15 chr17 41584151 41584583 -53688068 + RLTR20A LTR ERVK 1 444 -97 1 902 477 0 0 0 chr17 41584583 41584636 -53688015 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 902 264 30 0 0 chr17 41584636 41584668 -53687983 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 902 2918 174 48 15 chr17 41584668 41584758 -53687893 + RLTR20A LTR ERVK 445 540 -1 1 902 244 160 78 29 chr17 41585761 41585864 -53686787 + (TATAA)n Simple_repeat Simple_repeat 2 109 0 1 902 370 127 28 0 chr17 41585880 41585951 -53686700 + (TA)n Simple_repeat Simple_repeat 1 73 0 1 902 201 318 91 0 chr17 41586071 41586159 -53686492 - L4 LINE RTE -1691 338 243 1 902 203 268 10 0 chr17 41586736 41586833 -53685818 + GA-rich Low_complexity Low_complexity 1 98 0 1 902 26 0 0 0 chr17 41586916 41586942 -53685709 + AT_rich Low_complexity Low_complexity 1 26 0 1 902 537 16 0 0 chr17 41587095 41587157 -53685494 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 902 315 0 0 0 chr17 41587951 41587986 -53684665 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 902 1092 95 0 0 chr17 41588137 41588285 -53684366 + B1_Mus1 SINE Alu 1 148 0 1 902 1732 232 35 5 chr17 41591942 41592345 -53680306 + MTD LTR MaLR 5 419 0 1 902 275 258 0 15 chr17 41592685 41592752 -53679899 - Lx3C LINE L1 -111 6865 6800 1 902 1028 299 93 45 chr17 41594290 41594805 -53677846 - Lx9 LINE L1 -494 7150 6611 1 902 695 311 39 36 chr17 41595211 41595601 -53677050 - L1_Rod LINE L1 0 5847 5457 1 902 2517 75 0 6 chr17 41595949 41596283 -53676368 + IAPEY3_LTR LTR ERVK 1 332 0 1 902 21 0 0 0 chr17 41596647 41596668 -53675983 + AT_rich Low_complexity Low_complexity 1 21 0 1 902 494 93 12 0 chr17 41596668 41596754 -53675897 + (TC)n Simple_repeat Simple_repeat 1 87 0 1 902 210 71 0 0 chr17 41596754 41596782 -53675869 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 902 312 365 103 7 chr17 41596783 41596929 -53675722 - B3A SINE B2 -38 160 1 1 902 864 186 197 0 chr17 41597069 41597257 -53675394 + URR1A DNA MER1_type 1 225 -1 1 902 1224 270 54 11 chr17 41597426 41597799 -53674852 - MTD LTR MaLR -9 412 18 1 902 369 293 106 14 chr17 41597827 41597969 -53674682 - L1MB8 LINE L1 -317 5861 5707 1 902 1887 202 63 24 chr17 41598599 41599056 -53673595 - Lx2B LINE L1 -1 6999 6525 1 902 1317 78 0 0 chr17 41599172 41599351 -53673300 + (GAA)n Simple_repeat Simple_repeat 1 179 0 1 902 1049 136 0 6 chr17 41599351 41599529 -53673122 + (GGA)n Simple_repeat Simple_repeat 1 177 0 1 902 425 242 63 0 chr17 41599744 41599839 -53672812 + MTD LTR MaLR 1 101 -318 1 902 1059 8 0 0 chr17 41599849 41599969 -53672682 + (TTTCC)n Simple_repeat Simple_repeat 3 122 0 1 902 481 128 43 0 chr17 41599973 41600067 -53672584 - Lx LINE L1 -5 6649 6552 1 902 2170 59 7 0 chr17 41600808 41601080 -53671571 + L1_Mus1 LINE L1 6292 6565 -2 1 902 2271 266 75 40 chr17 41601475 41602286 -53670365 - RMER1B Other Other 0 1066 248 1 902 2649 175 22 4 chr17 41602327 41602831 -53669820 - L1_Mur3 LINE L1 -2908 2969 2457 1 902 5005 210 52 10 chr17 41602827 41604461 -53668190 + Lx5 LINE L1 5103 6822 -228 1 902 199 54 26 26 chr17 41604463 41604501 -53668150 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 902 1031 132 0 133 chr17 41604522 41604785 -53667866 - Lx2 LINE L1 0 6997 6770 1 902 751 119 31 8 chr17 41604771 41604898 -53667753 + Lx2 LINE L1 6318 6447 -550 1 902 712 168 8 0 chr17 41604887 41605012 -53667639 + Lx2A1 LINE L1 6502 6627 -381 1 902 1728 230 46 7 chr17 41605009 41605708 -53666943 - L1_Mur3 LINE L1 -4261 1616 891 1 902 306 106 0 0 chr17 41605773 41605820 -53666831 + (T)n Simple_repeat Simple_repeat 1 47 0 1 902 22 70 0 0 chr17 41606461 41606504 -53666147 + AT_rich Low_complexity Low_complexity 1 43 0 1 902 639 57 0 0 chr17 41607104 41607192 -53665459 + (GA)n Simple_repeat Simple_repeat 1 88 0 1 902 701 336 63 33 chr17 41607228 41607499 -53665152 - B4A SINE B4 0 292 14 1 902 2905 97 12 9 chr17 41608157 41608584 -53664067 - L1_Mus4 LINE L1 0 6636 6209 1 902 201 146 0 0 chr17 41608599 41608647 -53664004 + (T)n Simple_repeat Simple_repeat 1 48 0 1 902 352 312 26 43 chr17 41608694 41608811 -53663840 - B1_Mur1 SINE Alu -34 115 1 1 902 492 242 38 30 chr17 41608839 41608971 -53663680 + B1F SINE Alu 10 142 -7 1 902 333 0 0 0 chr17 41608997 41609034 -53663617 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 902 1505 47 0 0 chr17 41609699 41609890 -53662761 + L1Md_A LINE L1 6392 6582 0 1 902 1002 318 56 8 chr17 41610483 41610838 -53661813 + MTE2a LTR MaLR 6 377 -2 1 902 1191 78 0 0 chr17 41611146 41611313 -53661338 - L1_Mus2 LINE L1 -1 6565 6399 1 902 1392 49 26 36 chr17 41611327 41611519 -53661132 - B2_Mm1a SINE B2 -2 191 2 1 902 1349 226 95 0 chr17 41611519 41611824 -53660827 - Lx9 LINE L1 -281 7363 7030 1 902 711 211 41 36 chr17 41611829 41612050 -53660601 + Lx9 LINE L1 7407 7628 -16 1 902 228 315 0 18 chr17 41612440 41612553 -53660098 + (TCTA)n Simple_repeat Simple_repeat 2 112 0 1 902 223 288 118 55 chr17 41613305 41613415 -53659236 - ID_B1 SINE B4 -9 215 99 1 902 420 37 0 0 chr17 41613446 41613500 -53659151 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 902 21 0 0 0 chr17 41613688 41613709 -53658942 + AT_rich Low_complexity Low_complexity 1 21 0 1 902 266 185 0 0 chr17 41614989 41615043 -53657608 + L1MB1 LINE L1 5240 5293 -847 1 902 318 87 0 0 chr17 41615157 41615203 -53657448 + (CAG)n Simple_repeat Simple_repeat 2 47 0 1 902 590 268 180 15 chr17 41615321 41615538 -53657113 + L1MB1 LINE L1 5313 5565 -619 1 902 462 36 0 0 chr17 41615538 41615594 -53657057 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 902 590 270 132 54 chr17 41615594 41615817 -53656834 + L1MB1 LINE L1 5566 5806 -383 1 902 207 69 0 0 chr17 41615817 41615846 -53656805 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 902 590 271 132 54 chr17 41615846 41615950 -53656701 + L1MB1 LINE L1 5807 5903 -409 1 902 936 114 15 0 chr17 41615950 41616082 -53656569 + B1_Mus1 SINE Alu 5 138 -10 1 902 482 43 0 14 chr17 41616082 41616152 -53656499 + (CAAAA)n Simple_repeat Simple_repeat 2 70 0 1 902 524 288 135 64 chr17 41616152 41616270 -53656381 + L1MB1 LINE L1 5904 6031 -281 1 902 288 0 0 0 chr17 41616415 41616447 -53656204 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 902 25 31 0 0 chr17 41616447 41616479 -53656172 + AT_rich Low_complexity Low_complexity 1 32 0 1 902 1151 169 14 10 chr17 41617201 41617410 -53655241 + Lx2 LINE L1 6775 6984 -13 1 902 240 278 51 17 chr17 41617642 41617759 -53654892 + BLACKJACK DNA AcHobo 1028 1148 -1796 1 902 5585 129 50 26 chr17 41617781 41618727 -53653924 - Lx3B LINE L1 -80 6893 5926 1 902 795 80 0 0 chr17 41618722 41618834 -53653817 + Lx3C LINE L1 5803 5914 -1062 1 902 504 298 155 34 chr17 41618841 41619255 -53653396 + BLACKJACK DNA AcHobo 1312 1775 -1169 1 902 1215 320 103 9 chr17 41619432 41620084 -53652567 - Lx8 LINE L1 -909 6787 6058 1 902 730 302 100 21 chr17 41620079 41620278 -53652373 + Lx7 LINE L1 6826 7041 -655 1 902 1549 208 136 13 chr17 41620278 41620653 -53651998 + MTC LTR MaLR 1 421 0 1 902 730 302 68 41 chr17 41620653 41620826 -53651825 + Lx7 LINE L1 7042 7237 -236 1 902 711 138 0 0 chr17 41620906 41621058 -53651593 + (GA)n Simple_repeat Simple_repeat 2 153 0 1 902 244 335 92 5 chr17 41621410 41621617 -53651034 + BLACKJACK DNA AcHobo 2303 2527 -417 1 902 22 0 0 0 chr17 41622546 41622568 -53650083 + AT_rich Low_complexity Low_complexity 1 22 0 1 902 192 325 46 11 chr17 41623127 41623214 -53649437 - MIR SINE MIR -5 257 168 1 902 196 161 54 0 chr17 41623421 41623477 -53649174 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 1 902 2441 134 82 7 chr17 41623679 41624106 -53648545 + Lx3A LINE L1 6520 6978 -3 1 902 1212 112 16 16 chr17 41624138 41624328 -53648323 + B2_Mm2 SINE B2 1 190 -5 1 902 21 36 0 0 chr17 41624822 41624850 -53647801 + AT_rich Low_complexity Low_complexity 1 28 0 1 902 1900 222 11 5 chr17 41624853 41625229 -53647422 + ORR1C1 LTR MaLR 1 378 0 1 902 7602 105 6 1 chr17 41625351 41626850 -53645801 - L1_Mus3 LINE L1 -2 6636 5129 1 902 1004 244 41 60 chr17 41627368 41627735 -53644916 + Lx7 LINE L1 7182 7541 -155 1 902 249 279 0 0 chr17 41630131 41630199 -53642452 - RMER15 LTR ERVL -105 470 403 1 902 27 29 0 0 chr17 41630218 41630252 -53642399 + AT_rich Low_complexity Low_complexity 1 34 0 1 902 692 167 35 62 chr17 41630357 41630552 -53642099 - RMER6A LTR ERVK -63 693 544 1 902 356 83 0 0 chr17 41630555 41630603 -53642048 - RMER6A LTR ERVK -670 50 3 1 902 5243 179 24 17 chr17 41630745 41631608 -53641043 - Lx2 LINE L1 -13 6984 6130 1 902 5868 90 8 22 chr17 41631608 41632475 -53640176 + RLTR13A LTR ERVK 1 855 0 1 902 5243 179 24 17 chr17 41632475 41632608 -53640043 - Lx2 LINE L1 -868 6129 5981 1 902 201 208 0 36 chr17 41633020 41633075 -53639576 + (TTTG)n Simple_repeat Simple_repeat 4 56 0 1 902 360 324 49 0 chr17 41633081 41633183 -53639468 - RSINE1 SINE B4 -50 115 9 1 902 1323 67 6 22 chr17 41633212 41633395 -53639256 - B2_Mm1t SINE B2 -8 185 6 1 902 6386 33 1 0 chr17 41633441 41634199 -53638452 + L1Md_T LINE L1 5823 6581 -1 1 902 222 253 0 25 chr17 41634233 41634314 -53638337 + (TTTA)n Simple_repeat Simple_repeat 3 81 0 1 902 558 0 0 0 chr17 41635201 41635263 -53637388 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 902 654 37 0 0 chr17 41636146 41636227 -53636424 + (GAAA)n Simple_repeat Simple_repeat 2 82 0 1 902 5359 69 21 1 chr17 41636337 41637090 -53635561 - L1_Mus1 LINE L1 0 6567 5845 1 902 22 56 0 0 chr17 41637228 41637264 -53635387 + AT_rich Low_complexity Low_complexity 1 36 0 1 902 314 61 20 0 chr17 41637512 41637561 -53635090 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 902 402 74 0 0 chr17 41637564 41637618 -53635033 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 902 526 307 51 32 chr17 41637944 41638102 -53634549 + B3A SINE B2 2 162 -36 2 902 24 53 0 0 chr17 41638477 41638515 -53634136 + AT_rich Low_complexity Low_complexity 1 38 0 2 902 6885 94 10 40 chr17 41638665 41639701 -53632950 + Lx LINE L1 5648 6652 -2 2 902 879 102 0 0 chr17 41639776 41639904 -53632747 + (GAAA)n Simple_repeat Simple_repeat 1 128 0 2 902 21 36 0 0 chr17 41640785 41640813 -53631838 + AT_rich Low_complexity Low_complexity 1 28 0 2 902 1366 236 43 7 chr17 41640823 41641105 -53631546 + Lx5 LINE L1 6680 6971 -79 2 902 414 0 0 0 chr17 41641147 41641193 -53631458 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 2 902 330 107 0 0 chr17 41641900 41641956 -53630695 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 902 21 36 0 0 chr17 41642290 41642318 -53630333 + AT_rich Low_complexity Low_complexity 1 28 0 2 902 279 0 0 0 chr17 41642344 41642375 -53630276 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 902 506 312 50 140 chr17 41642393 41642479 -53630172 - B4A SINE B4 0 292 220 2 902 528 245 33 150 chr17 41642479 41642719 -53629932 - B3 SINE B2 -1 215 4 2 902 506 312 50 140 chr17 41642719 41642746 -53629905 - B4A SINE B4 -73 219 207 2 902 636 14 0 0 chr17 41642746 41642819 -53629832 + (TC)n Simple_repeat Simple_repeat 2 74 0 2 902 506 312 50 140 chr17 41642819 41643025 -53629626 - B4A SINE B4 -86 206 3 2 902 343 241 120 35 chr17 41643247 41643389 -53629262 + MTC-int LTR MaLR 1069 1222 -36 2 902 414 0 0 0 chr17 41643390 41643436 -53629215 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 902 276 403 0 7 chr17 41643499 41643634 -53629017 + MTD LTR MaLR 58 191 -230 2 902 230 253 0 12 chr17 41644858 41644942 -53627709 + GA-rich Low_complexity Low_complexity 2 84 0 2 902 631 273 134 0 chr17 41644944 41645138 -53627513 + MTD LTR MaLR 196 415 -4 2 902 537 346 82 6 chr17 41645363 41645546 -53627105 + B4A SINE B4 2 198 -94 2 902 1374 310 39 45 chr17 41645603 41646043 -53626608 + Lx5 LINE L1 6599 7035 -15 2 902 435 100 0 0 chr17 41646054 41646124 -53626527 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 2 902 24 0 0 0 chr17 41646235 41646259 -53626392 + AT_rich Low_complexity Low_complexity 1 24 0 2 902 5786 170 24 84 chr17 41646461 41648128 -53624523 + Lx3C LINE L1 4662 6229 -747 2 902 496 299 6 11 chr17 41648782 41648923 -53623728 + B3 SINE B2 43 182 -34 2 902 5406 42 0 0 chr17 41649377 41650026 -53622625 + L1Md_F3 LINE L1 5920 6568 -16 2 902 1467 272 36 43 chr17 41650503 41650918 -53621733 + MTD LTR MaLR 1 412 -7 2 902 612 214 139 5 chr17 41651179 41651372 -53621279 + MTD LTR MaLR 189 405 -14 2 902 641 304 75 37 chr17 41651490 41651784 -53620867 - MLT1A1 LTR MaLR -12 396 92 2 902 7408 87 34 7 chr17 41651805 41652887 -53619764 - L1_Mus3 LINE L1 0 6638 5530 2 902 1760 121 10 17 chr17 41652886 41653072 -53619579 + L1_Mm LINE L1 4443 4630 -1253 2 902 290 45 23 0 chr17 41653072 41653116 -53619535 + (CAAAA)n Simple_repeat Simple_repeat 4 48 0 2 902 1760 121 10 17 chr17 41653116 41653223 -53619428 + L1_Mm LINE L1 4631 4733 -1150 2 902 1296 58 0 34 chr17 41653449 41653627 -53619024 - L1_Mus1 LINE L1 0 6567 6396 2 902 22 0 0 0 chr17 41653692 41653714 -53618937 + AT_rich Low_complexity Low_complexity 1 22 0 2 902 609 238 51 66 chr17 41653822 41654096 -53618555 + Lx9 LINE L1 7374 7643 -1 2 902 1731 113 12 99 chr17 41654148 41654492 -53618159 + RLTRETN_Mm LTR ERVK 1 314 -8 2 902 302 0 26 0 chr17 41654492 41654530 -53618121 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 902 255 31 76 30 chr17 41655326 41655392 -53617259 + (TTTG)n Simple_repeat Simple_repeat 4 72 0 2 902 230 312 129 100 chr17 41655589 41655657 -53616994 - B3 SINE B2 0 216 152 2 902 315 0 0 0 chr17 41655657 41655692 -53616959 + (TC)n Simple_repeat Simple_repeat 2 36 0 2 902 297 0 0 0 chr17 41655692 41655724 -53616927 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 902 287 296 45 76 chr17 41655724 41655864 -53616787 - B3A SINE B2 -65 151 1 2 902 364 349 23 8 chr17 41656092 41656225 -53616426 + B4A SINE B4 6 140 -152 2 902 200 158 0 17 chr17 41656281 41656339 -53616312 + A-rich Low_complexity Low_complexity 3 59 0 2 902 212 287 43 65 chr17 41656352 41656445 -53616206 + RSINE1 SINE B4 75 165 0 2 902 439 369 20 30 chr17 41658330 41658531 -53614120 + B4 SINE B4 94 292 0 2 902 22 70 0 0 chr17 41658621 41658664 -53613987 + AT_rich Low_complexity Low_complexity 1 43 0 2 902 447 118 0 0 chr17 41658741 41658817 -53613834 + (TA)n Simple_repeat Simple_repeat 2 77 0 2 902 300 27 0 0 chr17 41658962 41658999 -53613652 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2 902 983 97 8 0 chr17 41659000 41659134 -53613517 - B1_Mm SINE Alu -12 135 1 2 902 24 0 0 0 chr17 41659212 41659236 -53613415 + AT_rich Low_complexity Low_complexity 1 24 0 2 902 498 319 39 9 chr17 41659266 41659439 -53613212 - MTD LTR MaLR -38 383 201 2 902 564 200 114 8 chr17 41659901 41660032 -53612619 + B1_Mm SINE Alu 1 145 -2 2 902 467 385 11 49 chr17 41660043 41660226 -53612425 + B3A SINE B2 1 176 -22 2 902 484 278 60 44 chr17 41660801 41660995 -53611656 + ORR1C1 LTR MaLR 3 189 -185 2 902 332 92 31 0 chr17 41660996 41661061 -53611590 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 2 902 1045 182 49 5 chr17 41661064 41661268 -53611383 + ORR1C1 LTR MaLR 166 378 0 2 902 21 0 0 0 chr17 41661342 41661363 -53611288 + AT_rich Low_complexity Low_complexity 1 21 0 2 902 492 318 49 43 chr17 41662080 41662426 -53610225 + RLTR12B LTR ERVK 96 485 -43 2 902 577 314 41 53 chr17 41662469 41662567 -53610084 - Lx8 LINE L1 -669 6804 6709 2 902 204 40 0 0 chr17 41662567 41662592 -53610059 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 902 577 314 41 53 chr17 41662592 41662759 -53609892 - Lx8 LINE L1 -765 6708 6542 2 902 511 288 63 34 chr17 41662951 41663156 -53609495 - RLTR12B LTR ERVK -313 215 5 2 902 1205 292 161 15 chr17 41663156 41663748 -53608903 + Lx8 LINE L1 6794 7471 -2 2 902 558 270 31 81 chr17 41664130 41664291 -53608360 - RSINE1 SINE B4 0 165 13 2 902 351 113 0 0 chr17 41665776 41665829 -53606822 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 902 246 193 35 0 chr17 41665829 41665881 -53606770 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 2 902 1011 319 49 6 chr17 41666159 41666509 -53606142 - MTEb LTR MaLR -12 367 3 2 902 27 0 0 0 chr17 41666569 41666596 -53606055 + AT_rich Low_complexity Low_complexity 1 27 0 2 902 180 0 0 0 chr17 41666830 41666850 -53605801 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2 902 988 53 71 50 chr17 41666857 41666997 -53605654 - B1_Mm SINE Alu -4 143 1 2 902 276 154 0 0 chr17 41667114 41667166 -53605485 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 902 725 49 0 10 chr17 41667166 41667269 -53605382 + (GA)n Simple_repeat Simple_repeat 2 103 0 2 902 571 289 63 46 chr17 41668005 41668372 -53604279 - L1MC2 LINE L1 -7 6337 5965 2 902 995 229 8 69 chr17 41668380 41668642 -53604009 + ORR1D1 LTR MaLR 1 246 -128 2 902 319 308 57 16 chr17 41668642 41668764 -53603887 - RLTR23 LTR ERV1 0 430 304 2 902 1453 69 16 0 chr17 41669622 41669810 -53602841 - B2_Mm2 SINE B2 -3 192 2 2 902 2560 83 9 0 chr17 41669951 41670301 -53602350 - L1_Mus1 LINE L1 0 6567 6215 2 902 2244 57 54 0 chr17 41670301 41670598 -53602053 + L1Md_F2 LINE L1 5924 6236 -346 2 902 829 274 66 4 chr17 41671060 41671331 -53601320 - RLTR4_MM-int LTR ERV1 -2384 5217 4930 2 902 670 324 71 30 chr17 41671407 41671911 -53600740 - RLTR4_MM-int LTR ERV1 -3084 4472 3897 2 902 36 0 0 0 chr17 41672363 41672399 -53600252 + AT_rich Low_complexity Low_complexity 1 36 0 2 902 651 281 165 19 chr17 41674088 41674549 -53598102 + L1MA8 LINE L1 5374 5913 -378 2 902 2084 319 93 51 chr17 41674562 41674633 -53598018 + Lx8 LINE L1 6259 6318 -1155 2 902 6129 75 10 0 chr17 41674633 41675454 -53597197 - L1_Mus3 LINE L1 -1 6637 5809 2 902 2084 319 93 51 chr17 41675454 41675821 -53596830 + Lx8 LINE L1 6319 6682 -791 2 902 857 87 16 0 chr17 41675821 41675948 -53596703 + (GAAA)n Simple_repeat Simple_repeat 3 131 0 2 902 2084 319 93 51 chr17 41675948 41676674 -53595977 + Lx8 LINE L1 6683 7472 -1 2 902 649 218 0 81 chr17 41676976 41677136 -53595515 + B1F SINE Alu 2 148 -1 2 902 231 319 14 34 chr17 41677568 41677714 -53594937 + (CATATA)n Simple_repeat Simple_repeat 1 143 0 2 902 248 229 0 16 chr17 41678198 41678260 -53594391 + (CTG)n Simple_repeat Simple_repeat 3 63 0 2 902 711 81 0 0 chr17 41678836 41678935 -53593716 + (GGAA)n Simple_repeat Simple_repeat 2 100 0 2 902 2422 150 14 12 chr17 41679167 41679586 -53593065 + BGLII_Mus LTR ERVK 2 421 -1 2 112 1524 212 84 68 chr17 41680573 41680942 -53591709 + RLTR1B LTR ERV1 138 512 0 2 903 615 326 17 6 chr17 41682229 41682405 -53590246 - B3 SINE B2 -38 178 1 2 903 1753 171 100 163 chr17 41682944 41683238 -53589413 + RLTR22_Mur LTR ERVK 453 683 -1165 2 903 1041 52 0 7 chr17 41683238 41683375 -53589276 - L1_Mus2 LINE L1 0 6566 6431 2 903 1753 171 100 163 chr17 41683375 41683652 -53588999 + RLTR22_Mur LTR ERVK 684 988 -860 2 903 1123 201 37 8 chr17 41683857 41684098 -53588553 + RLTR22_Mur LTR ERVK 1595 1842 -6 2 903 2894 167 45 45 chr17 41684098 41684676 -53587975 + Lx4B LINE L1 6470 7047 -11 2 903 866 248 200 9 chr17 41686830 41687180 -53585471 - MTD LTR MaLR -2 417 1 2 903 186 43 0 0 chr17 41687934 41687957 -53584694 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 2 903 23 54 0 0 chr17 41688300 41688337 -53584314 + AT_rich Low_complexity Low_complexity 1 37 0 2 903 392 378 15 40 chr17 41688573 41688774 -53583877 + B3A SINE B2 2 197 -1 2 903 5135 52 0 2 chr17 41689089 41689724 -53582927 - L1Md_F2 LINE L1 -14 6568 5935 2 903 1186 81 0 11 chr17 41689721 41689895 -53582756 + L1_Mus1 LINE L1 6396 6567 0 2 903 23 86 0 0 chr17 41692052 41692110 -53580541 + AT_rich Low_complexity Low_complexity 1 58 0 2 903 21 36 0 0 chr17 41692121 41692149 -53580502 + AT_rich Low_complexity Low_complexity 1 28 0 2 903 22 35 0 0 chr17 41692248 41692277 -53580374 + AT_rich Low_complexity Low_complexity 1 29 0 2 903 257 312 68 68 chr17 41692723 41692781 -53579870 - ORR1D2 LTR MaLR -7 372 320 2 903 616 176 318 0 chr17 41692781 41692951 -53579700 - URR1B DNA MER1_type -1 224 1 3 903 259 325 108 57 chr17 41692951 41693163 -53579488 - ORR1D2 LTR MaLR -69 301 79 2 903 25 75 0 0 chr17 41693319 41693372 -53579279 + AT_rich Low_complexity Low_complexity 1 53 0 3 903 203 244 0 0 chr17 41693789 41693830 -53578821 + (TTG)n Simple_repeat Simple_repeat 2 42 0 3 903 463 134 42 0 chr17 41694050 41694169 -53578482 + (TA)n Simple_repeat Simple_repeat 1 124 0 3 903 234 0 0 0 chr17 41694712 41694738 -53577913 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 903 10148 127 66 28 chr17 41694866 41696275 -53576376 + L1_Mur1 LINE L1 2301 3725 -2161 3 903 1041 95 7 0 chr17 41696275 41696422 -53576229 + B1_Mus1 SINE Alu 1 148 0 3 903 10148 127 66 28 chr17 41696422 41696894 -53575757 + L1_Mur1 LINE L1 3726 4253 -1633 3 903 360 59 0 0 chr17 41696921 41696972 -53575679 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 903 218 81 27 0 chr17 41696973 41697010 -53575641 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 903 273 39 39 19 chr17 41697327 41697379 -53575272 + (TTTTG)n Simple_repeat Simple_repeat 2 54 0 3 903 299 256 9 0 chr17 41697388 41697497 -53575154 + L1_Rod LINE L1 5143 5276 -870 3 903 245 217 26 104 chr17 41697500 41697512 -53575139 + MT2B2 LTR ERVL 152 157 -427 3 903 332 258 0 0 chr17 41697512 41697578 -53575073 + PB1D9 SINE Alu 1 66 -54 3 903 267 31 0 0 chr17 41697578 41697610 -53575041 + (AAATG)n Simple_repeat Simple_repeat 4 35 0 3 903 344 235 48 67 chr17 41697850 41697890 -53574761 + MER53 DNA hAT 1 40 -153 3 903 3041 36 0 0 chr17 41697890 41698253 -53574398 + L1Md_T LINE L1 6220 6582 0 3 903 344 235 48 67 chr17 41698253 41698317 -53574334 + MER53 DNA hAT 41 102 -91 3 903 315 0 0 0 chr17 41698375 41698410 -53574241 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 903 474 308 128 0 chr17 41698414 41698586 -53574065 - B3 SINE B2 -18 198 5 3 903 440 277 79 14 chr17 41698605 41698744 -53573907 - B1F SINE Alu 0 149 2 3 903 265 290 18 36 chr17 41698964 41699075 -53573576 - L1M4 LINE L1 -1411 4735 4627 3 903 4088 60 20 18 chr17 41699094 41699638 -53573013 - L1Md_F2 LINE L1 -2 6580 6036 3 903 3113 89 9 12 chr17 41699640 41700171 -53572480 + L1Md_F2 LINE L1 5491 6020 -562 3 903 293 359 97 15 chr17 41700176 41700371 -53572280 - B4A SINE B4 -76 216 6 3 903 28 48 0 0 chr17 41701374 41701416 -53571235 + AT_rich Low_complexity Low_complexity 1 42 0 3 903 322 102 0 0 chr17 41702423 41702472 -53570179 - Lx3_Mus LINE L1 -563 6446 6398 3 903 3508 102 23 0 chr17 41702472 41702984 -53569667 + Lx3_Mus LINE L1 6486 7009 0 3 903 485 356 6 47 chr17 41703239 41703389 -53569262 + B3A SINE B2 35 183 -15 3 903 534 43 0 0 chr17 41703389 41703458 -53569193 + (CA)n Simple_repeat Simple_repeat 1 69 0 3 903 485 356 6 47 chr17 41703458 41703478 -53569173 + B3A SINE B2 184 198 0 3 903 996 114 0 0 chr17 41704891 41705031 -53567620 - B1_Mm SINE Alu -7 140 1 3 903 3352 121 4 2 chr17 41705057 41705562 -53567089 - L1_Mus2 LINE L1 -183 5700 5195 3 903 4443 132 82 73 chr17 41705565 41706436 -53566215 + L1_Mus2 LINE L1 5688 6565 -1 3 903 233 282 116 57 chr17 41706487 41706679 -53565972 + L1MC4a LINE L1 6017 6223 -1659 3 903 252 0 0 0 chr17 41706679 41706707 -53565944 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 3 903 233 282 116 57 chr17 41706707 41706849 -53565802 + L1MC4a LINE L1 6224 6371 -1511 3 903 4745 79 8 0 chr17 41706990 41707609 -53565042 - RLTR1 LTR ERV1 0 624 1 3 903 29 0 0 0 chr17 41707883 41707912 -53564739 + AT_rich Low_complexity Low_complexity 1 29 0 3 903 670 97 18 0 chr17 41707959 41708072 -53564579 + (GA)n Simple_repeat Simple_repeat 2 116 0 3 903 335 340 74 29 chr17 41708160 41708783 -53563868 + L1MC4a LINE L1 7064 7714 -168 3 903 337 353 25 45 chr17 41708790 41708947 -53563704 + MER58A DNA MER1_type 35 188 -36 3 903 308 335 53 41 chr17 41708993 41709164 -53563487 + L1MC4a LINE L1 7709 7881 -1 3 903 191 160 0 39 chr17 41709252 41709304 -53563347 + T-rich Low_complexity Low_complexity 3 52 0 3 903 2203 68 7 0 chr17 41709311 41709604 -53563047 - L1_Mus1 LINE L1 -1 6566 6272 3 903 21 36 0 0 chr17 41709691 41709719 -53562932 + AT_rich Low_complexity Low_complexity 1 28 0 3 903 627 71 0 0 chr17 41710167 41710252 -53562399 + (CA)n Simple_repeat Simple_repeat 2 86 0 3 903 456 117 0 0 chr17 41710252 41710329 -53562322 + (GA)n Simple_repeat Simple_repeat 2 78 0 3 903 1086 87 17 0 chr17 41710335 41710508 -53562143 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 3 903 22 0 0 0 chr17 41710589 41710611 -53562040 + AT_rich Low_complexity Low_complexity 1 22 0 3 903 2084 140 50 3 chr17 41710760 41711118 -53561533 - L1_Mus4 LINE L1 -6 6630 6256 3 903 1160 144 71 5 chr17 41711603 41711813 -53560838 - L1VL4 LINE L1 -992 4891 4668 3 903 24887 17 2 1 chr17 41711830 41715460 -53557191 - L1Md_T LINE L1 0 6582 2948 3 903 14832 184 39 36 chr17 41715449 41719503 -53553148 - L1VL4 LINE L1 -1208 4675 615 3 903 204 40 0 0 chr17 41719510 41719535 -53553116 + (TA)n Simple_repeat Simple_repeat 2 26 0 3 903 4508 264 46 55 chr17 41719584 41720957 -53551694 + ORR1C1-int LTR MaLR 1 1361 -9 3 903 1864 188 13 53 chr17 41720966 41721360 -53551291 + ORR1C1 LTR MaLR 1 378 0 3 903 454 354 0 0 chr17 41721847 41721974 -53550677 + B1F SINE Alu 17 143 -6 3 903 191 0 0 94 chr17 41723061 41723093 -53549558 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 3 903 958 122 150 0 chr17 41723093 41723273 -53549378 - Lx3_Mus LINE L1 -9 7000 6794 3 903 36 62 0 0 chr17 41723368 41723432 -53549219 + AT_rich Low_complexity Low_complexity 1 64 0 3 903 15171 62 2 0 chr17 41723444 41725395 -53547256 + L1Md_F2 LINE L1 3632 5586 -297 3 903 7734 51 13 1 chr17 41725396 41726378 -53546273 + L1Md_F2 LINE L1 5588 6581 -1 3 903 212 184 0 0 chr17 41726742 41726780 -53545871 + (TTA)n Simple_repeat Simple_repeat 1 38 0 3 903 237 108 0 0 chr17 41726780 41726817 -53545834 + (TAG)n Simple_repeat Simple_repeat 1 37 0 3 903 804 108 0 0 chr17 41727734 41727864 -53544787 + (TG)n Simple_repeat Simple_repeat 2 131 0 3 903 189 111 18 53 chr17 41727882 41727939 -53544712 + T-rich Low_complexity Low_complexity 4 58 0 3 903 300 368 93 29 chr17 41728144 41728424 -53544227 + L1MEb LINE L1 717 1014 -5513 3 903 322 346 83 50 chr17 41728499 41728800 -53543851 + L1MC4 LINE L1 7480 7790 -252 3 903 402 21 0 0 chr17 41728900 41728947 -53543704 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 903 464 348 70 7 chr17 41728947 41729089 -53543562 - RSINE1 SINE B4 -7 158 8 3 903 1464 347 26 23 chr17 41729423 41730119 -53542532 + Lx8 LINE L1 6581 7278 -195 3 903 993 83 15 0 chr17 41730434 41730566 -53542085 + B1_Mus2 SINE Alu 2 135 -12 3 903 4967 69 0 3 chr17 41730568 41731209 -53541442 + L1Md_F2 LINE L1 5943 6581 -1 3 903 338 175 0 32 chr17 41731218 41731342 -53541309 + A-rich Low_complexity Low_complexity 1 120 0 3 903 300 302 52 23 chr17 41731935 41732108 -53540543 + L1MEb LINE L1 974 1151 -5482 3 903 370 397 62 14 chr17 41732122 41732398 -53540253 - MER74C LTR ERVL -18 442 154 3 903 204 176 19 19 chr17 41733188 41733240 -53539411 + T-rich Low_complexity Low_complexity 3 54 0 3 903 21 57 0 0 chr17 41733599 41733634 -53539017 + AT_rich Low_complexity Low_complexity 1 35 0 3 903 402 39 0 0 chr17 41733706 41733758 -53538893 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 903 25 0 0 0 chr17 41734232 41734257 -53538394 + AT_rich Low_complexity Low_complexity 1 25 0 3 903 553 336 62 54 chr17 41734320 41734578 -53538073 + B4 SINE B4 10 269 -23 3 903 582 54 0 0 chr17 41734645 41734719 -53537932 + (CA)n Simple_repeat Simple_repeat 2 75 0 3 903 8209 83 2 2 chr17 41734849 41735993 -53536658 - L1Md_F2 LINE L1 -1521 4362 3219 3 903 8579 83 30 0 chr17 41735992 41737181 -53535470 + L1Md_F2 LINE L1 4361 5585 -298 3 903 7378 77 6 4 chr17 41737182 41738162 -53534489 + L1Md_F2 LINE L1 5587 6568 -14 3 903 351 0 0 0 chr17 41738162 41738201 -53534450 + (GA)n Simple_repeat Simple_repeat 2 40 0 3 903 303 291 80 28 chr17 41738497 41738653 -53533998 - L1MB3 LINE L1 -228 5955 5791 3 903 438 20 0 0 chr17 41738653 41738704 -53533947 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 903 303 291 80 28 chr17 41738704 41738759 -53533892 - L1MB3 LINE L1 -393 5790 5733 3 903 448 288 100 68 chr17 41739148 41739338 -53533313 + B3A SINE B2 2 197 -1 3 903 486 0 0 0 chr17 41739450 41739504 -53533147 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 903 324 348 50 36 chr17 41739546 41739823 -53532828 - B4A SINE B4 -10 282 2 3 903 3662 42 5 0 chr17 41740623 41741057 -53531594 - RLTR10C LTR ERVK 0 436 1 3 903 7617 41 7 28 chr17 41741057 41742013 -53530638 - MMERVK10C-int LTR ERVK 0 7581 6646 3 903 41639 40 1 3 chr17 41741999 41746950 -53525701 - MMERVK10C-int LTR ERVK -1771 5810 870 3 903 726 44 0 0 chr17 41746992 41747083 -53525568 - RLTR10C LTR ERVK -345 91 1 3 903 1361 204 16 98 chr17 41747211 41747587 -53525064 + L1VL4 LINE L1 213 557 -5745 3 903 9218 174 31 1 chr17 41747582 41749629 -53523022 + Lx2 LINE L1 4050 6160 -837 3 903 991 231 102 41 chr17 41749629 41749984 -53522667 + RMER17D2 LTR ERVK 13 389 -420 3 903 1277 78 0 6 chr17 41749984 41750164 -53522487 + (TCTCC)n Simple_repeat Simple_repeat 1 179 0 3 903 991 231 102 41 chr17 41750164 41750251 -53522400 + RMER17D2 LTR ERVK 390 481 -328 3 903 1075 264 46 73 chr17 41750270 41750338 -53522313 + RMER13B LTR ERVK 272 333 -575 3 903 3480 23 0 0 chr17 41750338 41750734 -53521917 - MTA_Mm LTR MaLR 0 396 1 3 903 1075 265 74 60 chr17 41750734 41751232 -53521419 + RMER13B LTR ERVK 334 892 -16 3 903 5253 131 18 0 chr17 41751250 41752084 -53520567 + Lx2 LINE L1 6149 6997 0 3 903 295 350 76 11 chr17 41752113 41752298 -53520353 + MER67D LTR ERV1 229 425 -89 3 903 22 35 0 0 chr17 41754469 41754498 -53518153 + AT_rich Low_complexity Low_complexity 1 29 0 3 903 1609 214 30 3 chr17 41754957 41755285 -53517366 - RLTR15 LTR ERVK -22 337 1 3 903 986 159 59 50 chr17 41755500 41755719 -53516932 - Lx3B LINE L1 -3 6970 6750 3 903 447 68 0 0 chr17 41756329 41756388 -53516263 + (CAATA)n Simple_repeat Simple_repeat 2 60 0 3 903 2488 192 65 8 chr17 41756567 41757102 -53515549 - L1_Mur3 LINE L1 -163 5717 5152 3 903 1107 122 0 0 chr17 41757168 41757340 -53515311 + (TC)n Simple_repeat Simple_repeat 2 173 0 3 903 657 96 17 17 chr17 41757341 41757458 -53515193 + (TTCC)n Simple_repeat Simple_repeat 2 118 0 3 903 6684 184 23 18 chr17 41757644 41759213 -53513438 - Lx2B LINE L1 -5 6995 5424 3 903 470 277 69 48 chr17 41759214 41759445 -53513206 + Lx8 LINE L1 7229 7464 -9 3 903 862 302 74 11 chr17 41759473 41759744 -53512907 - MTD LTR MaLR -66 353 66 3 903 3032 281 42 10 chr17 41759748 41760552 -53512099 - Lx6 LINE L1 -9 7451 6622 3 903 736 171 0 0 chr17 41760624 41760735 -53511916 + B1_Mur4 SINE Alu 29 139 -11 3 903 306 67 0 0 chr17 41760735 41760780 -53511871 + (CTAA)n Simple_repeat Simple_repeat 3 47 0 3 903 1003 91 0 0 chr17 41760880 41761023 -53511628 - B1_Mus1 SINE Alu 0 148 6 4 903 1744 5 0 0 chr17 41761025 41761228 -53511423 + L1Md_T LINE L1 6380 6582 0 4 903 228 35 0 0 chr17 41761231 41761260 -53511391 + (A)n Simple_repeat Simple_repeat 1 29 0 4 903 282 29 0 0 chr17 41761637 41761672 -53510979 + (CATA)n Simple_repeat Simple_repeat 4 38 0 4 903 216 0 0 0 chr17 41761692 41761716 -53510935 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 4 903 696 24 0 0 chr17 41761815 41761897 -53510754 + (GA)n Simple_repeat Simple_repeat 1 82 0 4 903 1018 291 52 37 chr17 41761916 41762028 -53510623 + Lx8 LINE L1 6970 7083 -390 4 903 198 0 0 0 chr17 41762028 41762050 -53510601 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 4 903 1018 291 52 37 chr17 41762050 41762319 -53510332 + Lx8 LINE L1 7084 7357 -116 4 903 346 318 19 9 chr17 41762327 41762435 -53510216 + B3 SINE B2 108 216 0 4 903 526 287 63 0 chr17 41762492 41762666 -53509985 - Lx8 LINE L1 -525 6948 6764 4 903 7666 56 4 9 chr17 41762828 41763814 -53508837 + L1Md_F2 LINE L1 5602 6582 0 4 903 1645 134 0 64 chr17 41765042 41765353 -53507298 - Lx LINE L1 -6 6648 6358 4 903 251 119 14 157 chr17 41765353 41765423 -53507228 + Lx LINE L1 6300 6359 -295 4 903 861 303 43 19 chr17 41767235 41767491 -53505160 + B4A SINE B4 1 262 -30 4 903 667 351 46 28 chr17 41768314 41768713 -53503938 + MTE2a LTR MaLR 3 377 -2 4 903 861 303 43 19 chr17 41769228 41769484 -53503167 + B4A SINE B4 1 262 -30 4 903 437 232 78 28 chr17 41770665 41770788 -53501863 - B1_Mus1 SINE Alu 0 120 1 4 903 2094 246 24 35 chr17 41770788 41771361 -53501290 + Lx6 LINE L1 5708 6274 -1186 4 903 333 274 12 0 chr17 41771363 41771447 -53501204 + Lx6 LINE L1 6522 6606 -854 4 903 8285 91 11 12 chr17 41771516 41773454 -53499197 + L1_Mus2 LINE L1 4628 6562 -4 4 903 1442 243 229 31 chr17 41773461 41773980 -53498671 + Lx6 LINE L1 6762 7383 -77 4 903 256 229 0 57 chr17 41774789 41774877 -53497774 - MusHAL1 LINE L1 -426 2286 2204 4 903 3488 82 64 4 chr17 41774879 41775379 -53497272 - L1Md_F2 LINE L1 0 6582 6053 4 903 450 0 0 0 chr17 41775467 41775517 -53497134 + (CTGTG)n Simple_repeat Simple_repeat 1 50 0 4 903 290 333 49 11 chr17 41775654 41775839 -53496812 - L1M2 LINE L1 -641 5656 5465 4 903 2148 104 23 26 chr17 41775881 41776225 -53496426 - Lx2 LINE L1 -269 6728 6386 4 903 1086 139 40 30 chr17 41776224 41776424 -53496227 + Lx2 LINE L1 6766 6967 -30 4 903 21 57 0 0 chr17 41776634 41776669 -53495982 + AT_rich Low_complexity Low_complexity 1 35 0 4 903 32 26 0 0 chr17 41776789 41776828 -53495823 + AT_rich Low_complexity Low_complexity 1 39 0 4 903 5678 153 49 27 chr17 41776828 41777912 -53494739 - Lx2 LINE L1 -5 6992 5885 4 903 985 302 53 49 chr17 41777918 41778409 -53494242 + RLTR22_Mur LTR ERVK 84 576 -1272 4 903 1563 0 0 0 chr17 41778482 41778663 -53493988 - L1Md_A LINE L1 -691 5891 5711 4 903 5986 6 0 0 chr17 41778663 41779390 -53493261 + L1Md_A LINE L1 5917 6582 0 4 903 275 257 118 26 chr17 41779429 41779581 -53493070 + RLTR22_Mus LTR ERVK 654 819 -989 4 903 203 79 26 0 chr17 41779636 41779674 -53492977 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 903 265 233 32 53 chr17 41779727 41779822 -53492829 + RLTR22_Mur LTR ERVK 1165 1257 -591 4 903 8209 25 0 0 chr17 41779823 41780941 -53491710 - L1Md_T LINE L1 0 6582 5465 4 903 368 245 232 0 chr17 41780948 41781007 -53491644 + RMER12 LTR ERVK 737 806 -516 4 903 414 0 0 0 chr17 41781007 41781053 -53491598 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 903 368 245 232 0 chr17 41781053 41781148 -53491503 + RMER12 LTR ERVK 807 926 -396 4 903 559 268 85 6 chr17 41781459 41781624 -53491027 + RMER12 LTR ERVK 1145 1322 0 4 903 554 343 51 51 chr17 41781648 41782020 -53490631 + Lx9 LINE L1 6094 6465 -1179 4 903 417 39 0 0 chr17 41782071 41782122 -53490529 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 903 1461 254 76 76 chr17 41782122 41782569 -53490082 - MT2A LTR ERVL -84 449 3 4 903 2836 235 49 19 chr17 41782584 41783404 -53489247 + Lx9 LINE L1 6586 7429 -215 4 903 778 357 38 24 chr17 41783893 41784180 -53488471 + B4A SINE B4 2 292 0 4 903 432 0 0 0 chr17 41784182 41784230 -53488421 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 903 1098 267 59 6 chr17 41784247 41784605 -53488046 - L1_Mur3 LINE L1 -7073 639 263 4 903 400 353 8 8 chr17 41784828 41784962 -53487689 - RSINE1 SINE B4 -29 136 3 4 903 580 287 85 19 chr17 41785131 41785339 -53487312 + B3A SINE B2 2 216 0 4 903 423 0 0 0 chr17 41785691 41785738 -53486913 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 903 29 0 0 0 chr17 41786000 41786029 -53486622 + AT_rich Low_complexity Low_complexity 1 29 0 4 903 218 326 11 55 chr17 41786936 41787027 -53485624 - L2a LINE L2 -268 3158 3072 4 903 664 228 41 23 chr17 41787071 41787242 -53485409 + Lx5 LINE L1 6868 7041 -9 4 903 834 95 7 13 chr17 41787252 41787402 -53485249 + (GAAA)n Simple_repeat Simple_repeat 2 150 0 4 903 311 118 11 34 chr17 41787405 41787493 -53485158 + GA-rich Low_complexity Low_complexity 4 89 0 4 903 1227 292 159 29 chr17 41787799 41788603 -53484048 - RCHARR1 DNA MER1_type -65 909 1 4 903 379 318 39 28 chr17 41788609 41788787 -53483864 + B3A SINE B2 4 183 -15 4 903 2720 27 0 0 chr17 41788987 41789317 -53483334 - L1Md_F2 LINE L1 -417 6165 5836 4 903 3390 58 7 0 chr17 41789317 41789745 -53482906 + L1Md_F2 LINE L1 6151 6581 -1 4 903 21403 108 53 1 chr17 41789810 41794744 -53477907 + L1Md_F2 LINE L1 283 5918 -664 4 903 4447 8 2 0 chr17 41794744 41795236 -53477415 - MT2_Mm LTR ERVL 0 493 1 4 903 302 0 0 0 chr17 41795236 41795274 -53477377 - MERVL-int LTR ERVL 0 5485 5448 4 903 390 167 46 35 chr17 41795274 41795361 -53477290 - ORR1A3-int LTR MaLR -1323 640 553 4 903 45372 14 6 0 chr17 41795361 41800687 -53471964 - MERVL-int LTR ERVL -125 5360 1 4 903 4447 8 2 0 chr17 41800687 41801179 -53471472 - MT2_Mm LTR ERVL 0 493 1 4 903 5116 69 1 0 chr17 41801179 41801835 -53470816 + L1Md_F2 LINE L1 5914 6570 -12 4 903 521 321 21 14 chr17 41802091 41802233 -53470418 + RSINE1 SINE B4 4 146 -19 4 903 36 40 0 0 chr17 41802718 41802768 -53469883 + AT_rich Low_complexity Low_complexity 1 50 0 4 903 25 0 0 0 chr17 41802957 41802982 -53469669 + AT_rich Low_complexity Low_complexity 1 25 0 4 903 307 399 30 6 chr17 41803088 41803252 -53469399 + L1M2 LINE L1 3958 4125 -2018 4 903 6942 131 2 7 chr17 41804351 41805955 -53466696 - L1_Mus4 LINE L1 -4 6632 5035 4 903 242 345 6 76 chr17 41806219 41806376 -53466275 + RMER4A LTR ERVK 33 178 -288 4 903 3676 132 17 102 chr17 41806414 41807235 -53465416 - RMER17A LTR ERVK 0 751 1 4 903 207 0 0 0 chr17 41807661 41807684 -53464967 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 903 241 317 443 35 chr17 41808261 41808467 -53464184 + B4 SINE B4 3 292 0 4 903 323 78 20 0 chr17 41808469 41808520 -53464131 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 903 554 63 0 12 chr17 41808523 41808603 -53464048 + (GA)n Simple_repeat Simple_repeat 2 80 0 4 903 248 70 0 23 chr17 41808664 41808708 -53463943 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 903 23 0 0 0 chr17 41808838 41808861 -53463790 + AT_rich Low_complexity Low_complexity 1 23 0 4 903 1052 233 30 4 chr17 41809321 41809558 -53463093 - ORR1C1-int LTR MaLR -1266 243 1 4 903 1943 177 21 35 chr17 41809562 41809937 -53462714 - ORR1C1 LTR MaLR -8 370 1 4 903 414 0 0 0 chr17 41809982 41810028 -53462623 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 903 259 309 15 0 chr17 41810153 41810221 -53462430 + B1F SINE Alu 61 129 -20 4 903 331 96 48 12 chr17 41810343 41810427 -53462224 + (TAGA)n Simple_repeat Simple_repeat 4 90 0 4 903 282 192 8 24 chr17 41810524 41810647 -53462004 + (TAGA)n Simple_repeat Simple_repeat 2 122 0 4 903 1109 145 48 0 chr17 41811324 41811531 -53461120 - Lx2 LINE L1 -6 6991 6775 4 903 1528 141 42 0 chr17 41811531 41811793 -53460858 - Lx2 LINE L1 -354 6643 6371 4 112 11866 73 11 5 chr17 41811789 41814352 -53458299 - L1Md_F LINE L1 -2926 2957 380 4 904 2571 131 7 0 chr17 41814348 41814783 -53457868 - Lx2 LINE L1 -612 6385 5948 4 904 649 71 0 0 chr17 41815028 41815112 -53457539 - BC1_Mm scRNA scRNA -67 85 2 4 904 284 314 14 48 chr17 41815922 41816069 -53456582 - MLT1A LTR MaLR -203 171 30 4 904 387 0 0 0 chr17 41816589 41816632 -53456019 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 904 278 47 47 0 chr17 41816782 41816825 -53455826 + (TCTCTG)n Simple_repeat Simple_repeat 4 48 0 4 904 306 73 0 0 chr17 41816825 41816865 -53455786 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 904 192 198 0 56 chr17 41816936 41817043 -53455608 + (CAGAGA)n Simple_repeat Simple_repeat 4 104 0 4 904 21 0 0 0 chr17 41817403 41817424 -53455227 + AT_rich Low_complexity Low_complexity 1 21 0 4 904 180 0 0 0 chr17 41817530 41817550 -53455101 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 4 904 279 79 0 0 chr17 41818126 41818164 -53454487 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 904 27 29 0 0 chr17 41818858 41818892 -53453759 + AT_rich Low_complexity Low_complexity 1 34 0 4 904 7262 75 27 3 chr17 41819193 41820303 -53452348 - L1_Mus3 LINE L1 -3 6635 5453 4 904 387 0 0 0 chr17 41820811 41820854 -53451797 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 904 293 244 24 35 chr17 41820903 41820988 -53451663 - MLT1B LTR MaLR -292 98 15 4 904 21 0 0 0 chr17 41821774 41821795 -53450856 + AT_rich Low_complexity Low_complexity 1 21 0 4 904 629 298 52 33 chr17 41822171 41822383 -53450268 + B3 SINE B2 1 216 0 4 904 1196 71 9 23 chr17 41822856 41823072 -53449579 + (TGG)n Simple_repeat Simple_repeat 1 212 0 4 904 201 209 0 44 chr17 41823041 41823086 -53449565 + (ATGGTG)n Simple_repeat Simple_repeat 5 47 0 4 904 350 327 9 9 chr17 41823144 41823249 -53449402 - RSINE1 SINE B4 -50 115 11 4 904 34153 49 39 8 chr17 41824213 41830232 -53442419 - L1Md_T LINE L1 0 6582 375 4 904 483 18 0 0 chr17 41830352 41830408 -53442243 + (TTTC)n Simple_repeat Simple_repeat 3 58 0 4 904 4667 117 39 0 chr17 41830951 41831082 -53441569 + L1_Mus1 LINE L1 5101 5231 -652 4 904 486 0 0 0 chr17 41831082 41831136 -53441515 + (TA)n Simple_repeat Simple_repeat 1 54 0 4 904 7091 92 13 0 chr17 41831136 41832438 -53440213 + L1_Mus1 LINE L1 5232 6567 0 4 904 511 219 16 66 chr17 41832687 41832809 -53439842 + ORR1C2 LTR MaLR 1 116 -268 4 904 911 159 0 6 chr17 41832824 41832986 -53439665 + CT-rich Low_complexity Low_complexity 10 171 0 4 904 297 0 0 0 chr17 41832986 41833019 -53439632 + (CTA)n Simple_repeat Simple_repeat 1 33 0 4 904 31 88 0 0 chr17 41833263 41833343 -53439308 + AT_rich Low_complexity Low_complexity 1 80 0 4 904 707 329 11 26 chr17 41833370 41833611 -53439040 + ORR1E LTR MaLR 31 292 -87 5 904 360 177 21 0 chr17 41833651 41833747 -53438904 + Lx9 LINE L1 7547 7644 0 5 904 23 0 0 0 chr17 41833895 41833918 -53438733 + AT_rich Low_complexity Low_complexity 1 23 0 5 904 576 0 0 0 chr17 41833941 41834005 -53438646 + (TA)n Simple_repeat Simple_repeat 1 64 0 5 904 2291 205 114 122 chr17 41834540 41834627 -53438024 - RMER12 LTR ERVK -263 1059 988 5 904 432 0 0 0 chr17 41834627 41834675 -53437976 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 904 2291 209 118 111 chr17 41834675 41835632 -53437019 - RMER12 LTR ERVK -335 987 95 5 904 240 35 0 0 chr17 41835634 41835663 -53436988 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 5 904 1191 70 0 0 chr17 41835665 41835823 -53436828 - B2_Mm2 SINE B2 -35 160 3 5 904 538 224 19 9 chr17 41835823 41835929 -53436722 - RMER12 LTR ERVK -1297 107 1 5 904 6358 125 46 9 chr17 41836101 41837387 -53435264 - Lx LINE L1 -7 6647 5315 5 904 1196 114 33 9 chr17 41837364 41837577 -53435074 + MusHAL1 LINE L1 2034 2251 -461 5 904 843 84 2 0 chr17 41837569 41837705 -53434946 + L1_Mm LINE L1 3091 3230 -2653 5 904 22174 147 43 44 chr17 41838307 41840267 -53432384 + L1_Mus2 LINE L1 398 2467 -3416 5 904 993 137 0 0 chr17 41840267 41840413 -53432238 + B1_Mus2 SINE Alu 2 147 0 5 904 22174 167 18 77 chr17 41840413 41840481 -53432170 + L1_Mus2 LINE L1 2468 2468 -3415 5 904 950 53 114 0 chr17 41840481 41840613 -53432038 + B1_Mm SINE Alu 1 147 0 5 904 22174 167 18 77 chr17 41840613 41840664 -53431987 + L1_Mm LINE L1 2468 2468 -3415 5 904 967 130 6 11 chr17 41840664 41840843 -53431808 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 5 904 22174 167 18 77 chr17 41840843 41840865 -53431786 + L1_Mm LINE L1 2468 2468 -3415 5 904 1038 106 6 22 chr17 41840865 41841048 -53431603 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 5 904 22174 167 18 77 chr17 41841048 41841197 -53431454 + L1_Mus2 LINE L1 2468 2469 -3414 5 904 1120 85 0 19 chr17 41841197 41841413 -53431238 + (GAAA)n Simple_repeat Simple_repeat 1 212 0 5 904 22174 167 18 77 chr17 41841413 41842481 -53430170 + L1_Mus2 LINE L1 2470 3490 -2393 5 904 672 13 0 0 chr17 41842481 41842558 -53430093 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 5 904 354 74 0 0 chr17 41842559 41842613 -53430038 + (CAGA)n Simple_repeat Simple_repeat 4 57 0 5 904 22174 141 13 53 chr17 41842613 41845690 -53426961 + L1_Mus2 LINE L1 3491 6566 0 5 904 429 20 0 0 chr17 41846196 41846246 -53426405 + (TAAAA)n Simple_repeat Simple_repeat 1 50 0 5 904 3835 54 6 0 chr17 41846870 41847349 -53425302 + L1Md_F2 LINE L1 6088 6569 -13 5 904 670 255 123 82 chr17 41847437 41847786 -53424865 - MTE2b LTR MaLR 0 379 4 5 904 41192 13 0 3 chr17 41848021 41856254 -53416397 - L1Md_A LINE L1 0 6582 1 5 904 486 151 0 0 chr17 41856752 41856858 -53415793 + T-rich Low_complexity Low_complexity 1 106 0 5 904 638 12 12 0 chr17 41856860 41856940 -53415711 - B1_Mm SINE Alu 0 147 67 5 904 4205 148 55 0 chr17 41857482 41858169 -53414482 + RMER19A LTR ERVK 2 726 -11 5 904 408 131 0 0 chr17 41858187 41858248 -53414403 + MurERV4_19-int LTR ERVK 1 61 -5719 5 904 12558 147 47 13 chr17 41858251 41860427 -53412224 + MurERV4_19-int LTR ERVK 558 2808 -2972 5 904 6285 18 0 0 chr17 41860998 41861720 -53410931 + L1Md_T LINE L1 4864 5585 -298 5 904 8470 32 0 0 chr17 41861721 41862717 -53409934 + L1Md_T LINE L1 5587 6582 0 5 904 246 344 60 65 chr17 41863546 41863714 -53408937 + RLTR25A LTR ERVK 937 1103 0 5 904 7538 136 49 9 chr17 41863750 41864762 -53407889 + MurERV4_19-int LTR ERVK 4435 5442 -338 5 904 2718 124 48 2 chr17 41864762 41865182 -53407469 - Lx LINE L1 -9 6645 6207 5 904 7538 133 50 9 chr17 41865182 41865484 -53407167 + MurERV4_19-int LTR ERVK 5443 5779 -1 5 904 2490 151 23 24 chr17 41865486 41865880 -53406771 + RMER19A LTR ERVK 3 355 -382 5 904 3771 81 20 45 chr17 41865880 41866437 -53406214 - L1_Mus2 LINE L1 -4 6562 6020 5 904 2490 208 61 98 chr17 41866437 41866833 -53405818 + RMER19A LTR ERVK 356 737 0 5 904 570 205 0 16 chr17 41866940 41867069 -53405582 + RMER19A LTR ERVK 451 577 -160 5 904 273 255 102 56 chr17 41867492 41867600 -53405051 + RMER20B LTR ERVK 472 584 -43 5 904 2011 168 103 63 chr17 41867611 41867708 -53404943 + RLTR28 LTR ERVL 27 105 -419 5 904 557 112 20 0 chr17 41867708 41867806 -53404845 - L1_Mus3 LINE L1 -6 6632 6533 5 904 2011 168 103 63 chr17 41867806 41868185 -53404466 + RLTR28 LTR ERVL 106 522 -2 5 904 226 218 18 0 chr17 41868463 41868518 -53404133 + L1MD LINE L1 3271 3326 -2820 5 904 23 33 0 0 chr17 41869231 41869261 -53403390 + AT_rich Low_complexity Low_complexity 1 30 0 5 904 234 0 0 0 chr17 41869710 41869736 -53402915 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5 904 185 119 24 0 chr17 41871355 41871397 -53401254 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 5 904 21 36 0 0 chr17 41871414 41871442 -53401209 + AT_rich Low_complexity Low_complexity 1 28 0 5 904 225 83 0 0 chr17 41871597 41871633 -53401018 + (T)n Simple_repeat Simple_repeat 1 36 0 5 904 350 264 27 75 chr17 41872179 41872476 -53400175 - MYSERV6-int LTR ERVK -1639 7320 7178 5 904 201 268 18 0 chr17 41872643 41872699 -53399952 + GA-rich Low_complexity Low_complexity 1 57 0 5 904 312 188 0 0 chr17 41872818 41872882 -53399769 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 904 213 121 0 0 chr17 41873548 41873581 -53399070 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 904 554 282 8 0 chr17 41873771 41873902 -53398749 - RLTR18B LTR ERVK -9 503 372 5 904 384 59 29 14 chr17 41873907 41873976 -53398675 + (TTTA)n Simple_repeat Simple_repeat 4 73 0 5 904 1066 281 43 84 chr17 41874007 41874399 -53398252 - RLTR18B LTR ERVK -128 384 9 5 904 5940 186 7 89 chr17 41874504 41875281 -53397370 - L1_Mur2 LINE L1 -3038 2839 2062 5 904 291 28 0 0 chr17 41875281 41875317 -53397334 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 904 5940 186 7 89 chr17 41875317 41876015 -53396636 - L1_Mur2 LINE L1 -3816 2061 1485 5 904 876 300 53 3 chr17 41876031 41876335 -53396316 - Charlie10 DNA MER1_type -410 2412 2094 5 904 821 62 209 0 chr17 41876368 41876497 -53396154 + L1_Mus2 LINE L1 6410 6565 -1 5 904 2787 143 8 8 chr17 41876507 41877191 -53395460 - L1_Mur2 LINE L1 -4377 1500 817 5 904 807 224 75 0 chr17 41877661 41877862 -53394789 + B3 SINE B2 1 216 0 5 904 638 218 7 15 chr17 41878365 41878500 -53394151 - B1_Mur2 SINE Alu -2 147 14 5 904 380 301 6 56 chr17 41878500 41878527 -53394124 - ID_B1 SINE B4 -1 223 70 5 904 21 36 0 0 chr17 41879317 41879345 -53393306 + AT_rich Low_complexity Low_complexity 1 28 0 5 904 303 273 0 0 chr17 41879633 41879710 -53392941 - ID2 SINE ID -4 79 3 5 904 561 275 57 38 chr17 41879908 41880067 -53392584 - RSINE1 SINE B4 0 165 4 5 904 27 49 0 0 chr17 41880081 41880122 -53392529 + AT_rich Low_complexity Low_complexity 1 41 0 5 904 227 380 11 0 chr17 41880773 41880865 -53391786 + L2 LINE L2 2668 2760 -659 5 904 21 0 0 0 chr17 41881323 41881344 -53391307 + AT_rich Low_complexity Low_complexity 1 21 0 5 904 513 292 12 24 chr17 41881482 41881647 -53391004 + RSINE1 SINE B4 3 165 0 5 904 2975 186 108 0 chr17 41881931 41882581 -53390070 + L1_Mur2 LINE L1 211 930 -5782 5 904 440 18 18 0 chr17 41882584 41882641 -53390010 + (TTG)n Simple_repeat Simple_repeat 2 59 0 5 904 1505 259 112 42 chr17 41882677 41883398 -53389253 - L1_Mur3 LINE L1 -6426 1286 515 5 904 243 0 0 0 chr17 41883549 41883576 -53389075 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 904 899 338 17 40 chr17 41883582 41884002 -53388649 - Lx9 LINE L1 -282 7362 6953 5 904 464 184 10 0 chr17 41884225 41884328 -53388323 + (TA)n Simple_repeat Simple_repeat 2 105 0 5 904 1915 268 22 26 chr17 41884363 41884869 -53387782 + Lx9 LINE L1 6417 6920 -724 5 904 418 318 146 52 chr17 41885287 41885595 -53387056 + Lx8 LINE L1 6400 6736 -737 5 904 235 326 23 0 chr17 41885604 41885690 -53386961 + Lx8 LINE L1 7190 7277 -196 5 904 213 121 0 0 chr17 41885732 41885765 -53386886 + (CATA)n Simple_repeat Simple_repeat 2 34 0 5 904 182 128 26 0 chr17 41885773 41885812 -53386839 + (TTATA)n Simple_repeat Simple_repeat 5 44 0 5 904 486 49 0 0 chr17 41885846 41885907 -53386744 + (TA)n Simple_repeat Simple_repeat 2 62 0 5 904 1429 270 34 3 chr17 41885987 41886336 -53386315 + ORR1D1 LTR MaLR 6 365 -9 5 904 273 197 0 0 chr17 41886932 41886998 -53385653 + (TA)n Simple_repeat Simple_repeat 2 67 0 5 904 269 266 116 11 chr17 41887134 41887229 -53385422 + MIRb SINE MIR 121 225 -43 5 904 29 28 0 0 chr17 41887274 41887310 -53385341 + AT_rich Low_complexity Low_complexity 1 36 0 5 904 360 0 0 0 chr17 41887425 41887465 -53385186 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 904 495 27 27 14 chr17 41887757 41887831 -53384820 + (TA)n Simple_repeat Simple_repeat 2 76 0 5 904 259 66 77 26 chr17 41887853 41887864 -53384787 + (TA)n Simple_repeat Simple_repeat 1 11 0 5 904 4339 111 40 77 chr17 41887864 41888704 -53383947 + RMER17D2 LTR ERVK 1 809 0 5 904 259 66 77 26 chr17 41888704 41888770 -53383881 + (TA)n Simple_repeat Simple_repeat 2 72 0 5 904 1283 267 41 3 chr17 41889228 41889566 -53383085 + ORR1C1 LTR MaLR 1 351 -27 5 904 31 44 0 0 chr17 41889668 41889713 -53382938 + AT_rich Low_complexity Low_complexity 1 45 0 5 904 318 106 0 0 chr17 41890796 41890843 -53381808 + (TA)n Simple_repeat Simple_repeat 2 48 0 5 904 197 137 30 78 chr17 41890867 41891033 -53381618 + (TTATA)n Simple_repeat Simple_repeat 5 162 0 5 904 236 209 25 42 chr17 41891155 41891275 -53381376 + (TA)n Simple_repeat Simple_repeat 2 119 0 5 904 192 80 19 74 chr17 41891275 41891329 -53381322 + (TTATA)n Simple_repeat Simple_repeat 5 55 0 5 904 225 380 12 37 chr17 41891510 41891592 -53381059 + RSINE1 SINE B4 7 86 -79 5 904 259 369 35 25 chr17 41891975 41892178 -53380473 + Lx8 LINE L1 7267 7471 -2 5 904 25 0 0 0 chr17 41892790 41892815 -53379836 + AT_rich Low_complexity Low_complexity 1 25 0 5 904 976 97 14 7 chr17 41893006 41893152 -53379499 + B1_Mm SINE Alu 1 147 0 5 904 364 48 48 0 chr17 41893152 41893214 -53379437 + (CAAAAA)n Simple_repeat Simple_repeat 6 70 0 5 904 734 32 0 11 chr17 41893214 41893308 -53379343 + (GGAAA)n Simple_repeat Simple_repeat 3 95 0 5 904 284 278 43 43 chr17 41893317 41893411 -53379240 + MER89 LTR ERV1 377 470 -89 5 904 414 0 0 0 chr17 41894265 41894311 -53378340 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 904 299 347 39 62 chr17 41894335 41894464 -53378187 + RSINE1 SINE B4 29 154 -11 5 904 306 0 0 0 chr17 41894480 41894514 -53378137 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 904 378 0 0 0 chr17 41895287 41895329 -53377322 + (TAAAA)n Simple_repeat Simple_repeat 3 44 0 5 904 437 329 92 64 chr17 41895492 41895882 -53376769 + L1MEg LINE L1 1147 1547 -4537 5 904 1012 241 20 89 chr17 41897710 41898060 -53374591 - RLTR18-int LTR ERVK -126 5235 4910 5 904 1092 80 0 0 chr17 41899214 41899352 -53373299 + B1_Mus1 SINE Alu 1 138 -10 6 904 267 104 0 0 chr17 41899354 41899402 -53373249 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 6 904 354 258 69 16 chr17 41899632 41899798 -53372853 + RLTR13D3 LTR ERVK 983 1114 0 6 904 322 319 44 0 chr17 41900339 41900452 -53372199 - RLTR18-int LTR ERVK -483 4878 4761 5 904 346 287 101 0 chr17 41901060 41901189 -53371462 - RLTR14-int LTR ERV1 -1873 3444 3303 6 904 531 329 82 55 chr17 41901249 41901996 -53370655 - MuRRS4-int LTR ERV1 -2015 3048 2322 6 904 1165 55 0 0 chr17 41902289 41902434 -53370217 - B1_Mm SINE Alu -2 145 1 6 904 1651 177 6 52 chr17 41902937 41903282 -53369369 + ORR1A4 LTR MaLR 1 329 0 6 904 1019 259 110 80 chr17 41903719 41904272 -53368379 + L1_Mus2 LINE L1 396 965 -5651 6 904 1179 110 16 6 chr17 41904284 41904467 -53368184 - B2_Mm1t SINE B2 -6 187 3 6 904 983 99 0 0 chr17 41904468 41904609 -53368042 + L1_Mus1 LINE L1 6418 6558 -9 6 904 37303 17 3 8 chr17 41904611 41909805 -53362846 + L1Md_A LINE L1 422 5586 -297 6 904 8580 21 0 6 chr17 41909805 41910807 -53361844 + L1Md_A LINE L1 5587 6582 0 6 904 1034 102 0 0 chr17 41910812 41910949 -53361702 + B1_Mm SINE Alu 2 138 -9 6 904 210 37 0 0 chr17 41910949 41910976 -53361675 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 904 28824 119 13 11 chr17 41911080 41916666 -53355985 + L1_Mus2 LINE L1 974 6566 0 6 904 1146 66 0 0 chr17 41917499 41917651 -53355000 + (GA)n Simple_repeat Simple_repeat 1 152 0 6 904 583 308 61 125 chr17 41918866 41919014 -53353637 + RMER10A LTR ERVL 3 131 -311 6 904 2265 117 3 12 chr17 41919014 41919344 -53353307 - ORR1A2 LTR MaLR 0 327 1 6 904 583 308 61 125 chr17 41919344 41919651 -53353000 + RMER10A LTR ERVL 132 429 -13 6 904 237 209 16 42 chr17 41919937 41920016 -53352635 + MLT1G1 LTR MaLR 415 561 -18 6 904 297 0 0 0 chr17 41920389 41920422 -53352229 + (T)n Simple_repeat Simple_repeat 1 33 0 6 904 40083 17 0 6 chr17 41920850 41926619 -53346032 - L1Md_A LINE L1 -3 6579 854 6 904 821 53 62 0 chr17 41926611 41926724 -53345927 - L1Md_A LINE L1 -6400 324 205 6 904 321 290 85 21 chr17 41927004 41927145 -53345506 + MLT1H LTR MaLR 5 154 -395 6 904 25 0 0 0 chr17 41927170 41927195 -53345456 + AT_rich Low_complexity Low_complexity 1 25 0 6 904 24 0 0 0 chr17 41927247 41927271 -53345380 + AT_rich Low_complexity Low_complexity 1 24 0 6 904 360 0 0 0 chr17 41927279 41927319 -53345332 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 904 477 0 0 0 chr17 41927776 41927829 -53344822 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 904 27 0 0 0 chr17 41928428 41928455 -53344196 + AT_rich Low_complexity Low_complexity 1 27 0 6 904 313 301 32 21 chr17 41928961 41929056 -53343595 - B4A SINE B4 -194 98 3 6 904 1459 216 74 66 chr17 41929379 41929469 -53343182 + RLTR14 LTR ERV1 3 108 -274 6 904 189 0 0 0 chr17 41929469 41929490 -53343161 + (CAAAA)n Simple_repeat Simple_repeat 1 21 0 6 904 1459 216 74 66 chr17 41929490 41929776 -53342875 + RLTR14 LTR ERV1 109 382 0 6 904 713 185 0 6 chr17 41929862 41930041 -53342610 + CT-rich Low_complexity Low_complexity 1 178 0 6 904 477 47 0 0 chr17 41930036 41930100 -53342551 + (CA)n Simple_repeat Simple_repeat 1 64 0 6 904 423 0 0 0 chr17 41930100 41930147 -53342504 + (CACTA)n Simple_repeat Simple_repeat 4 50 0 6 904 3227 124 26 4 chr17 41931684 41932177 -53340474 - L1Md_F2 LINE L1 0 6582 6079 6 904 1287 88 0 0 chr17 41932181 41932351 -53340300 + L1Md_F2 LINE L1 6112 6281 -301 6 904 16109 80 27 13 chr17 41932354 41933265 -53339386 - L1Md_F2 LINE L1 -476 6106 5177 6 904 288 0 0 0 chr17 41933265 41933297 -53339354 + (TTG)n Simple_repeat Simple_repeat 2 33 0 6 904 16109 75 14 17 chr17 41933297 41934833 -53337818 - L1Md_F2 LINE L1 -707 5176 3663 6 904 368 280 11 0 chr17 41935089 41935182 -53337469 - Lx9 LINE L1 -336 7308 7215 6 904 279 0 0 0 chr17 41935268 41935299 -53337352 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 904 298 278 17 9 chr17 41935299 41935415 -53337236 + Lx9 LINE L1 7514 7630 -14 6 904 1834 116 0 53 chr17 41936306 41936606 -53336045 + MT2B2 LTR ERVL 3 286 -298 6 904 6974 147 31 7 chr17 41936573 41937782 -53334869 + ORR1A2-int LTR MaLR 725 1962 -1 6 904 2113 94 3 62 chr17 41937783 41938122 -53334529 + ORR1A2 LTR MaLR 1 319 -8 6 904 1341 236 89 6 chr17 41938532 41938847 -53333804 - RLTR26 LTR ERVK 0 642 302 6 904 312 120 0 0 chr17 41938849 41938899 -53333752 + (CTG)n Simple_repeat Simple_repeat 1 50 0 6 904 853 78 0 0 chr17 41938916 41939032 -53333619 - B1_Mus1 SINE Alu 0 148 33 6 904 1528 166 27 36 chr17 41939042 41939343 -53333308 - RLTR26 LTR ERVK -344 298 1 6 904 291 203 0 0 chr17 41939403 41939467 -53333184 + GA-rich Low_complexity Low_complexity 2 65 0 6 904 181 258 42 73 chr17 41941260 41941356 -53331295 - L2a LINE L2 -281 3145 3053 6 904 402 138 0 0 chr17 41941501 41941559 -53331092 - Lx2 LINE L1 -165 6832 6775 6 904 1818 129 53 23 chr17 41941558 41941860 -53330791 - Lx2 LINE L1 -353 6644 6334 6 904 1014 161 11 0 chr17 41941860 41942040 -53330611 + Lx2 LINE L1 6816 6997 0 6 904 208 139 0 0 chr17 41942059 41942095 -53330556 + (A)n Simple_repeat Simple_repeat 1 36 0 6 1 2793 231 53 82 chr17 41942966 41943889 -53328762 - RMER17B LTR ERVK -62 896 1 6 905 8125 34 5 4 chr17 41944120 41945110 -53327541 + L1Md_F2 LINE L1 5590 6580 -2 6 905 690 291 95 19 chr17 41945173 41945383 -53327268 + B4 SINE B4 5 230 -62 6 905 1773 130 87 17 chr17 41945399 41945697 -53326954 + ORR1A2 LTR MaLR 1 319 -8 6 905 265 370 52 58 chr17 41945663 41945699 -53326952 + ID_B1 SINE B4 52 145 -79 6 905 476 284 46 0 chr17 41945699 41945808 -53326843 + B1_Mur2 SINE Alu 10 123 -26 6 905 265 370 52 58 chr17 41945808 41945835 -53326816 + ID_B1 SINE B4 146 222 -2 6 905 339 307 23 8 chr17 41945897 41946025 -53326626 + GA-rich Low_complexity Low_complexity 1 130 0 6 905 1034 90 7 7 chr17 41947181 41947326 -53325325 + B1_Mm SINE Alu 2 146 -1 6 905 191 88 29 0 chr17 41947329 41947363 -53325288 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 905 330 80 0 0 chr17 41947635 41947685 -53324966 + (GA)n Simple_repeat Simple_repeat 1 50 0 6 905 35784 22 16 19 chr17 41948294 41952767 -53319884 + L1Md_A LINE L1 416 4925 -958 6 905 225 183 46 77 chr17 41952767 41952832 -53319819 - RMER20A LTR ERVK -268 248 186 6 905 35784 22 16 19 chr17 41952832 41953485 -53319166 + L1Md_A LINE L1 4926 5585 -298 6 905 8380 36 0 0 chr17 41953486 41954482 -53318169 + L1Md_T LINE L1 5587 6582 0 6 905 343 148 0 22 chr17 41954739 41954829 -53317822 + (TG)n Simple_repeat Simple_repeat 1 88 0 6 905 477 0 0 0 chr17 41955189 41955242 -53317409 + (TC)n Simple_repeat Simple_repeat 2 54 0 6 905 252 0 0 0 chr17 41955242 41955269 -53317382 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 905 479 208 197 28 chr17 41955957 41956135 -53316516 - B3 SINE B2 -6 210 3 6 905 3088 141 8 0 chr17 41956171 41956653 -53315998 - Lx2 LINE L1 -277 6720 6235 6 905 1530 140 29 18 chr17 41956653 41956929 -53315722 + Lx LINE L1 6376 6654 0 6 905 610 322 37 44 chr17 41957048 41957454 -53315197 - L1MA6 LINE L1 -337 5963 5561 6 905 284 333 97 87 chr17 41957883 41958172 -53314479 - B4A SINE B4 0 292 1 6 905 198 0 0 0 chr17 41958344 41958366 -53314285 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 6 905 2052 196 28 40 chr17 41959283 41959709 -53312942 + MTC LTR MaLR 1 421 0 6 905 310 339 102 0 chr17 41960597 41960724 -53311927 + RMER15 LTR ERVL 280 419 -156 6 905 232 222 0 27 chr17 41960849 41960923 -53311728 + (TA)n Simple_repeat Simple_repeat 2 73 0 6 905 253 292 82 18 chr17 41961319 41961490 -53311161 + L1VL4 LINE L1 428 609 -6025 6 905 12289 175 6 27 chr17 41961555 41962226 -53310425 + L1VL4 LINE L1 753 1409 -2505 6 905 585 64 0 0 chr17 41962226 41962304 -53310347 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 6 905 12289 156 64 13 chr17 41962304 41964940 -53307711 + L1VL4 LINE L1 1409 4731 -1146 6 905 260 27 0 26 chr17 41964967 41965005 -53307646 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 6 905 478 73 72 12 chr17 41965022 41965105 -53307546 + L1_Mur1 LINE L1 4735 4822 -1064 6 905 5857 176 59 13 chr17 41965111 41966247 -53306404 + Lx2B LINE L1 5809 6996 -4 6 905 793 289 68 17 chr17 41966725 41967077 -53305574 + ORR1D2 LTR MaLR 1 370 0 6 905 1476 271 41 72 chr17 41967142 41967708 -53304943 + Lx9 LINE L1 7096 7643 -1 6 905 722 248 0 0 chr17 41967814 41967955 -53304696 - B1_Mur1 SINE Alu -7 142 2 6 905 33 0 0 0 chr17 41968981 41969014 -53303637 + AT_rich Low_complexity Low_complexity 1 33 0 6 905 23 0 0 0 chr17 41969126 41969149 -53303502 + AT_rich Low_complexity Low_complexity 1 23 0 6 905 229 250 62 0 chr17 41969163 41969227 -53303424 - Lx8 LINE L1 -189 7284 7217 6 905 3767 92 24 4 chr17 41969300 41969832 -53302819 + L1_Mus3 LINE L1 6090 6632 -6 6 905 1348 186 117 0 chr17 41970062 41970326 -53302325 - Lx5 LINE L1 -481 6569 6275 6 905 2209 230 28 4 chr17 41970328 41970787 -53301864 + Lx5 LINE L1 6574 7043 -7 6 905 281 336 18 9 chr17 41970986 41971100 -53301551 - PB1 SINE Alu -11 116 2 6 905 224 378 0 26 chr17 41971211 41971287 -53301364 + PB1D10 SINE Alu 14 87 -30 6 905 218 200 30 15 chr17 41971298 41971364 -53301287 + (TAA)n Simple_repeat Simple_repeat 1 67 0 6 905 23 33 0 0 chr17 41971394 41971424 -53301227 + AT_rich Low_complexity Low_complexity 1 30 0 6 905 6358 133 32 12 chr17 41971566 41972644 -53300007 + Lx3C LINE L1 5872 6971 -5 6 905 204 222 0 0 chr17 41972646 41972700 -53299951 + A-rich Low_complexity Low_complexity 1 54 0 6 905 922 213 56 26 chr17 41972857 41973088 -53299563 - Lx9 LINE L1 -246 7398 7161 6 905 468 0 0 0 chr17 41973088 41973140 -53299511 + (TC)n Simple_repeat Simple_repeat 2 53 0 6 905 384 103 0 0 chr17 41973142 41973200 -53299451 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 905 474 212 18 64 chr17 41973315 41973362 -53299289 + Lx9 LINE L1 7481 7521 -123 6 905 309 109 0 0 chr17 41973362 41973408 -53299243 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 905 474 212 18 64 chr17 41973408 41973531 -53299120 + Lx9 LINE L1 7522 7643 -1 6 905 207 0 0 0 chr17 41974146 41974169 -53298482 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 905 255 230 40 13 chr17 41974668 41974743 -53297908 - MIRb SINE MIR 0 268 192 6 905 504 0 0 0 chr17 41975187 41975243 -53297408 + (TC)n Simple_repeat Simple_repeat 1 56 0 6 905 387 0 0 0 chr17 41975243 41975285 -53297366 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 905 676 312 49 27 chr17 41975380 41975643 -53297008 + B4A SINE B4 6 274 -18 7 905 405 0 0 0 chr17 41975648 41975693 -53296958 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 905 21 36 0 0 chr17 41975835 41975863 -53296788 + AT_rich Low_complexity Low_complexity 1 28 0 7 905 510 17 0 0 chr17 41976148 41976207 -53296444 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 905 413 188 169 45 chr17 41976309 41976510 -53296141 - Lx9 LINE L1 0 7644 7419 7 905 1900 263 30 6 chr17 41976489 41976998 -53295653 - Lx9 LINE L1 -127 7517 6997 7 905 1861 289 80 21 chr17 41977028 41977725 -53294926 + Lx8 LINE L1 6732 7469 -4 7 905 23 78 0 0 chr17 41978934 41978985 -53293666 + AT_rich Low_complexity Low_complexity 1 51 0 7 905 344 296 21 14 chr17 41979580 41979724 -53292927 + GA-rich Low_complexity Low_complexity 5 149 0 7 905 22 56 0 0 chr17 41979962 41979998 -53292653 + AT_rich Low_complexity Low_complexity 1 36 0 7 905 2977 47 63 0 chr17 41980166 41980547 -53292104 - L1Md_F2 LINE L1 0 6582 6178 7 905 539 296 78 49 chr17 41980728 41980944 -53291707 + B4 SINE B4 1 227 -65 7 905 183 139 0 0 chr17 41980944 41980980 -53291671 + (ATG)n Simple_repeat Simple_repeat 1 36 0 7 905 539 296 78 49 chr17 41980980 41981047 -53291604 + B4 SINE B4 228 292 0 7 905 717 106 0 0 chr17 41981060 41981173 -53291478 + (TA)n Simple_repeat Simple_repeat 1 113 0 7 905 358 347 0 0 chr17 41981173 41981317 -53291334 + (CA)n Simple_repeat Simple_repeat 1 144 0 7 905 729 198 48 5 chr17 41981500 41981688 -53290963 + RMER17C LTR ERVK 1 196 -214 7 905 718 205 39 40 chr17 41981923 41982126 -53290525 + RMER19B LTR ERVK 1 180 -557 7 905 3244 84 2 7 chr17 41982136 41982579 -53290072 + L1_Mus2 LINE L1 6126 6566 0 7 905 1192 238 49 26 chr17 41982583 41982890 -53289761 + Lx3C LINE L1 6661 6974 -2 7 905 1274 299 99 26 chr17 41984663 41985280 -53287371 - Lx8 LINE L1 -35 7438 6777 7 905 198 0 0 0 chr17 41985682 41985704 -53286947 + (A)n Simple_repeat Simple_repeat 1 22 0 7 905 5276 33 0 5 chr17 41986674 41987308 -53285343 - L1Md_F3 LINE L1 -12 6572 5942 7 905 551 330 18 16 chr17 41987322 41987522 -53285129 - B3A SINE B2 -23 193 6 7 905 337 324 62 48 chr17 41987638 41987910 -53284741 + L1MD LINE L1 4975 5250 -896 7 905 439 302 71 61 chr17 41987912 41988419 -53284232 + L1M5 LINE L1 5256 5767 -412 7 905 354 339 90 56 chr17 41988441 41988707 -53283944 + B4A SINE B4 4 278 -14 7 905 639 283 66 44 chr17 41989212 41989660 -53282991 + L1MB1 LINE L1 5663 6117 -51 7 905 22 0 0 0 chr17 41989783 41989805 -53282846 + AT_rich Low_complexity Low_complexity 1 22 0 7 905 180 152 0 0 chr17 41989820 41989853 -53282798 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 7 905 195 42 0 0 chr17 41989999 41990023 -53282628 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 7 905 566 311 5 57 chr17 41990024 41990202 -53282449 - MTE2a LTR MaLR -54 325 154 7 905 867 20 0 0 chr17 41990202 41990303 -53282348 + (TTC)n Simple_repeat Simple_repeat 2 102 0 7 905 566 311 5 57 chr17 41990303 41990318 -53282333 - MTE2a LTR MaLR -226 153 142 7 905 19177 84 5 1 chr17 41990368 41993668 -53278983 - L1Md_F2 LINE L1 -12 6570 3257 7 905 6636 116 29 12 chr17 41993674 41994823 -53277828 + L1_Mus4 LINE L1 5443 6615 -21 7 905 5674 54 1 3 chr17 41994963 41995682 -53276969 - L1Md_F2 LINE L1 0 6582 5865 7 905 973 276 72 24 chr17 41995683 41996236 -53276415 - L1_Rod LINE L1 -3946 1901 1322 7 905 21 0 0 0 chr17 41996378 41996399 -53276252 + AT_rich Low_complexity Low_complexity 1 21 0 7 905 9728 136 45 50 chr17 41996758 42000000 -53272651 - L1Md_F2 LINE L1 -8 6574 3354 7 905 15283 80 12 2 chr17 42000002 42002935 -53269716 - L1Md_F LINE L1 -2532 3351 390 1 905 1089 103 0 0 chr17 42003116 42003271 -53269380 - L1_Mus2 LINE L1 0 6566 6412 2 905 522 0 0 0 chr17 42003271 42003329 -53269322 + (TTA)n Simple_repeat Simple_repeat 1 58 0 3 905 551 316 146 23 chr17 42003687 42004089 -53268562 - MLT1D LTR MaLR -7 460 47 4 905 23 0 0 0 chr17 42005381 42005404 -53267247 + AT_rich Low_complexity Low_complexity 1 23 0 5 905 831 267 5 19 chr17 42005650 42005864 -53266787 - B3 SINE B2 -3 213 3 6 905 24 0 0 0 chr17 42006490 42006514 -53266137 + AT_rich Low_complexity Low_complexity 1 24 0 7 905 302 306 122 44 chr17 42006562 42006767 -53265884 - RMER12 LTR ERVK -366 956 736 8 905 1670 114 77 27 chr17 42006854 42007152 -53265499 + L1_Mur1 LINE L1 3900 4212 -1674 9 905 231 114 0 0 chr17 42007574 42007609 -53265042 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 1 905 2578 65 0 0 chr17 42007619 42007942 -53264709 - L1_Mus1 LINE L1 0 6567 6245 1 905 273 397 43 83 chr17 42008799 42008974 -53263677 - MTD LTR MaLR -73 346 190 1 905 4791 67 10 0 chr17 42008974 42009598 -53263053 - L1Md_F2 LINE L1 -1 6581 5952 1 905 273 397 43 83 chr17 42009598 42009771 -53262880 - MTD LTR MaLR -230 189 12 1 905 340 306 220 43 chr17 42010240 42010544 -53262107 + L1M2 LINE L1 4685 5042 -1101 1 905 320 111 19 0 chr17 42010575 42010629 -53262022 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 905 243 215 92 0 chr17 42010655 42010720 -53261931 + L1M2 LINE L1 5149 5219 -921 1 905 407 238 86 7 chr17 42010834 42010986 -53261665 + L1M2 LINE L1 5358 5521 -668 1 905 38384 5 0 0 chr17 42011063 42016347 -53256304 + L1Md_A LINE L1 301 5586 -297 1 905 9019 2 0 0 chr17 42016347 42017343 -53255308 + L1Md_A LINE L1 5587 6582 0 1 905 828 153 229 0 chr17 42017370 42017553 -53255098 + URR1B DNA MER1_type 1 225 0 1 905 506 289 145 55 chr17 42017808 42018317 -53254334 + L1MA6 LINE L1 5619 6173 -127 1 905 445 339 0 8 chr17 42019415 42019546 -53253105 - B4 SINE B4 -9 283 154 1 905 330 370 104 32 chr17 42019968 42020306 -53252345 - MLT1A0-int LTR MaLR -797 612 251 2 905 257 100 0 20 chr17 42020333 42020384 -53252267 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 2 905 646 315 92 15 chr17 42020495 42020834 -53251817 - MLT1A0 LTR MaLR -4 404 1 2 905 384 190 0 0 chr17 42021638 42021717 -53250934 + (TG)n Simple_repeat Simple_repeat 2 80 0 2 905 189 74 0 0 chr17 42022028 42022055 -53250596 + (T)n Simple_repeat Simple_repeat 1 27 0 2 905 1551 188 5 138 chr17 42022573 42022843 -53249808 - ORR1A3 LTR MaLR 0 326 101 2 905 1216 34 7 0 chr17 42022843 42022989 -53249662 - B1_Mus1 SINE Alu 0 148 2 2 905 1551 188 5 138 chr17 42022989 42023094 -53249557 - ORR1A3 LTR MaLR -226 100 1 2 905 471 332 114 8 chr17 42023364 42023619 -53249032 + B4A SINE B4 1 282 -10 2 905 468 0 0 0 chr17 42023644 42023696 -53248955 + (TC)n Simple_repeat Simple_repeat 1 52 0 2 905 483 18 0 0 chr17 42023696 42023751 -53248900 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 905 511 133 0 35 chr17 42024482 42024600 -53248051 + B1_Mm SINE Alu 17 147 0 2 905 183 42 0 0 chr17 42025461 42025485 -53247166 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 905 271 325 57 66 chr17 42025515 42025637 -53247014 + MTEa LTR MaLR 3 123 -256 3 905 282 217 0 0 chr17 42025657 42025726 -53246925 + GA-rich Low_complexity Low_complexity 2 70 0 3 905 224 350 70 54 chr17 42026181 42026395 -53246256 - MIRc SINE MIR -6 270 36 3 905 2415 115 16 13 chr17 42026961 42027348 -53245303 + L1_Mus4 LINE L1 6249 6636 0 3 905 289 336 9 9 chr17 42027445 42027550 -53245101 - RMER15 LTR ERVL -45 530 426 3 905 21 36 0 0 chr17 42028416 42028444 -53244207 + AT_rich Low_complexity Low_complexity 1 28 0 3 905 5901 129 17 3 chr17 42028452 42029661 -53242990 + L1VL4 LINE L1 21 1243 -2316 3 905 3375 167 2 38 chr17 42029663 42030273 -53242378 + L1VL1 LINE L1 207 794 -5628 3 905 16612 173 100 5 chr17 42030269 42034624 -53238027 + L1_Mus3 LINE L1 1834 6633 -5 3 905 212 106 0 130 chr17 42034646 42034700 -53237951 + A-rich Low_complexity Low_complexity 1 47 0 4 905 279 0 0 0 chr17 42035331 42035362 -53237289 + (A)n Simple_repeat Simple_repeat 1 31 0 4 905 14273 159 46 5 chr17 42035362 42038079 -53234572 + L1_Mur1 LINE L1 1999 4827 -1059 4 905 4683 104 21 62 chr17 42038079 42038868 -53233783 + RLTR13D6 LTR ERVK 1 757 -145 4 905 1081 83 14 0 chr17 42038868 42039013 -53233638 + B1_Mus1 SINE Alu 2 148 0 4 905 198 145 26 26 chr17 42039013 42039091 -53233560 + A-rich Low_complexity Low_complexity 1 78 0 4 905 2222 148 29 143 chr17 42039115 42039659 -53232992 + RLTR45 LTR ERVK 1 482 0 4 905 4732 80 37 23 chr17 42039659 42039915 -53232736 + RLTR45-int LTR ERVK 1 278 -6966 4 905 234 0 0 0 chr17 42039915 42039941 -53232710 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 905 4732 80 37 23 chr17 42039941 42040367 -53232284 + RLTR45-int LTR ERVK 279 691 -6553 4 905 1625 96 0 34 chr17 42040713 42040951 -53231700 + RLTR45-int LTR ERVK 681 910 -6334 4 905 1715 176 6 3 chr17 42040990 42041304 -53231347 + Lx LINE L1 6327 6641 -13 4 905 216 167 0 0 chr17 42041311 42041359 -53231292 + A-rich Low_complexity Low_complexity 1 48 0 4 905 203 152 42 42 chr17 42041380 42041428 -53231223 + T-rich Low_complexity Low_complexity 3 50 0 5 905 3009 135 6 32 chr17 42041440 42041707 -53230944 - Lx4A LINE L1 0 7058 6801 5 905 3796 121 166 71 chr17 42041707 42042535 -53230116 + RMER17A2 LTR ERVK 1 906 0 5 905 3009 135 6 32 chr17 42042535 42042766 -53229885 - Lx4A LINE L1 -258 6800 6573 5 905 195 42 0 0 chr17 42042858 42042882 -53229769 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 5 905 2424 277 22 15 chr17 42042899 42043634 -53229017 + L1MC1 LINE L1 5446 6179 -154 5 905 396 0 0 0 chr17 42043634 42043678 -53228973 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 905 2424 277 22 15 chr17 42043678 42043722 -53228929 + L1MC1 LINE L1 6180 6230 -103 5 905 547 314 36 36 chr17 42044799 42044964 -53227687 + MTEa LTR MaLR 1 165 -214 5 905 675 324 43 7 chr17 42044988 42045265 -53227386 + MTEa-int LTR MaLR 1271 1557 -23 5 905 560 270 26 20 chr17 42045287 42045438 -53227213 + MTEa LTR MaLR 9 160 -219 5 905 274 58 58 0 chr17 42045438 42045490 -53227161 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 5 905 317 336 83 8 chr17 42045568 42045688 -53226963 + MTEa LTR MaLR 250 378 -1 5 905 603 299 14 0 chr17 42045923 42046067 -53226584 - ID_B1 SINE B4 -3 221 76 5 905 835 337 80 6 chr17 42046200 42046552 -53226099 + MTEa LTR MaLR 1 378 -1 6 905 1122 144 3 3 chr17 42046690 42046882 -53225769 - ORR1A4 LTR MaLR -2 365 160 6 905 364 310 100 73 chr17 42047095 42047356 -53225295 - RLTR26 LTR ERVK -216 426 159 6 905 3073 197 27 2 chr17 42047459 42048054 -53224597 + Lx3C LINE L1 6365 6974 -2 6 905 414 0 0 0 chr17 42048411 42048457 -53224194 + (TA)n Simple_repeat Simple_repeat 2 47 0 6 905 665 111 0 18 chr17 42048483 42048593 -53224058 + (GAAA)n Simple_repeat Simple_repeat 2 109 0 6 905 893 268 93 39 chr17 42048593 42049078 -53223573 - L1MA8 LINE L1 -78 6213 5703 6 905 244 328 33 28 chr17 42049089 42049271 -53223380 + L1M2 LINE L1 5452 5634 -657 6 905 462 36 0 0 chr17 42049439 42049495 -53223156 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 905 768 256 34 0 chr17 42050484 42050660 -53221991 + B3 SINE B2 1 182 -34 6 905 237 200 0 30 chr17 42050738 42050805 -53221846 + A-rich Low_complexity Low_complexity 4 68 0 7 905 8825 27 2 38 chr17 42051291 42052422 -53220229 + L1Md_A LINE L1 255 1344 -5380 7 905 11738 12 1 0 chr17 42055333 42056664 -53215987 + L1_Mm LINE L1 4256 5586 -297 7 905 8842 12 0 0 chr17 42056664 42057660 -53214991 + L1Md_A LINE L1 5587 6582 0 7 905 11738 12 1 0 chr17 42057660 42057672 -53214979 + L1_Mm LINE L1 5587 5599 -284 7 905 265 281 0 0 chr17 42058115 42058197 -53214454 + (CA)n Simple_repeat Simple_repeat 1 82 0 7 905 393 396 137 21 chr17 42058441 42058813 -53213838 - MLT1H1 LTR MaLR -140 415 1 7 905 767 218 129 0 chr17 42059787 42059989 -53212662 - Lx9 LINE L1 -449 7195 6968 7 905 326 145 0 0 chr17 42059980 42060042 -53212609 + Lx9 LINE L1 7575 7636 -8 7 905 22 35 0 0 chr17 42060626 42060655 -53211996 + AT_rich Low_complexity Low_complexity 1 29 0 7 905 693 186 24 123 chr17 42060679 42060931 -53211720 - Lx9 LINE L1 0 7644 7418 7 905 917 264 29 9 chr17 42061630 42061840 -53210811 + B3 SINE B2 2 215 -1 8 905 489 325 153 43 chr17 42062045 42062299 -53210352 + B4 SINE B4 1 282 -10 8 905 795 221 86 15 chr17 42063264 42063462 -53209189 - B3 SINE B2 -3 213 2 8 905 21 82 0 0 chr17 42063467 42063516 -53209135 + AT_rich Low_complexity Low_complexity 1 49 0 8 905 232 202 125 50 chr17 42063794 42063841 -53208810 - Lx6 LINE L1 -1 7459 7416 8 905 3191 183 7 12 chr17 42063841 42064439 -53208212 + Lx2 LINE L1 6403 6997 0 8 905 232 202 125 50 chr17 42064439 42064511 -53208140 - Lx6 LINE L1 -45 7415 7332 8 905 299 362 127 40 chr17 42064678 42064931 -53207720 + MLT1E1A LTR MaLR 1 275 -378 8 905 2283 209 40 98 chr17 42064993 42065669 -53206982 - RMER1B Other Other -2 1064 236 8 905 417 363 96 48 chr17 42065689 42065938 -53206713 + MLT1E1A LTR MaLR 345 605 -75 8 905 408 40 0 0 chr17 42067274 42067324 -53205327 + (TG)n Simple_repeat Simple_repeat 1 50 0 8 905 441 0 0 0 chr17 42067325 42067374 -53205277 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 8 905 22 0 0 0 chr17 42067443 42067465 -53205186 + AT_rich Low_complexity Low_complexity 1 22 0 9 905 1935 181 77 21 chr17 42068110 42068699 -53203952 + Lx4A LINE L1 6464 7038 -20 9 905 239 71 24 0 chr17 42068950 42068992 -53203659 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 9 905 180 0 0 0 chr17 42069302 42069322 -53203329 + (A)n Simple_repeat Simple_repeat 1 20 0 9 905 847 319 81 17 chr17 42069323 42069476 -53203175 - MTD LTR MaLR -39 380 208 9 905 1815 143 3 25 chr17 42069476 42069799 -53202852 - Lx2 LINE L1 0 6997 6682 9 905 847 319 81 17 chr17 42069799 42070002 -53202649 - MTD LTR MaLR -212 207 2 9 905 1230 75 5 51 chr17 42070252 42070448 -53202203 - L1_Mus2 LINE L1 0 6566 6380 9 905 1261 292 53 36 chr17 42070461 42070984 -53201667 + Lx8 LINE L1 6926 7471 -2 9 905 40 59 0 0 chr17 42070984 42071052 -53201599 + AT_rich Low_complexity Low_complexity 1 68 0 9 905 300 289 57 8 chr17 42071111 42071233 -53201418 + L1M5 LINE L1 3748 3875 -2271 9 905 247 345 0 11 chr17 42071248 42071336 -53201315 + PB1D10 SINE Alu 3 89 -28 1 905 1205 265 110 0 chr17 42071339 42071713 -53200938 - MTD LTR MaLR 0 419 5 1 905 439 310 157 71 chr17 42071718 42072254 -53200397 + L1M5 LINE L1 4437 5018 -1128 9 905 1076 121 0 6 chr17 42072685 42072859 -53199792 + (TTC)n Simple_repeat Simple_repeat 3 175 0 1 905 623 127 16 23 chr17 42072859 42072988 -53199663 + CT-rich Low_complexity Low_complexity 3 130 0 1 905 233 117 0 104 chr17 42072997 42073050 -53199601 - RMER17C LTR ERVK -135 275 227 1 905 585 52 0 0 chr17 42073050 42073127 -53199524 + (GA)n Simple_repeat Simple_repeat 2 78 0 1 905 233 117 0 104 chr17 42073127 42073140 -53199511 - RMER17C LTR ERVK -184 226 216 1 905 666 87 0 0 chr17 42073803 42073906 -53198745 + (GATTG)n Simple_repeat Simple_repeat 1 103 0 1 905 760 94 8 16 chr17 42073917 42074046 -53198605 + (GCTTG)n Simple_repeat Simple_repeat 1 128 0 1 905 252 22 43 22 chr17 42074049 42074095 -53198556 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1 906 413 204 18 23 chr17 42075429 42075600 -53197051 + (CATA)n Simple_repeat Simple_repeat 2 171 0 1 906 875 339 46 24 chr17 42076636 42077005 -53195646 - MTD LTR MaLR -30 389 13 1 906 3017 56 201 2 chr17 42077027 42077454 -53195197 - RLTR1B LTR ERV1 0 512 1 1 906 249 389 102 8 chr17 42077534 42077661 -53194990 + B1F1 SINE Alu 10 148 -1 1 906 234 351 121 29 chr17 42077695 42077868 -53194783 - L2 LINE L2 -562 2857 2669 1 906 5820 155 57 9 chr17 42077893 42078945 -53193706 - RLTR25A LTR ERVK 0 1103 1 1 906 197 333 89 92 chr17 42079017 42079344 -53193307 - L2 LINE L2 -879 2540 2215 1 906 198 370 48 30 chr17 42079662 42079829 -53192822 + MIRb SINE MIR 25 194 -74 1 906 237 65 0 0 chr17 42080503 42080534 -53192117 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 906 840 180 6 6 chr17 42080803 42080971 -53191680 + Lx2 LINE L1 6828 6995 -2 1 906 23 0 0 0 chr17 42080971 42080994 -53191657 + AT_rich Low_complexity Low_complexity 1 23 0 1 906 898 186 85 5 chr17 42082287 42082476 -53190175 + ORR1C2 LTR MaLR 1 204 -180 1 906 25786 123 23 7 chr17 42082476 42082884 -53189767 + L1_Mus2 LINE L1 1092 1520 -4363 1 906 2904 38 46 3 chr17 42082884 42083257 -53189394 + L1Md_F3 LINE L1 6193 6581 -3 1 906 25786 129 34 18 chr17 42083257 42088224 -53184427 + L1_Mus2 LINE L1 1521 6564 -2 1 906 297 188 0 0 chr17 42088281 42088387 -53184264 + (TG)n Simple_repeat Simple_repeat 1 106 0 1 906 587 256 73 25 chr17 42089404 42089608 -53183043 + B3 SINE B2 3 216 0 1 906 1206 199 0 26 chr17 42090092 42090324 -53182327 + URR1A DNA MER1_type 1 226 0 1 906 240 86 0 0 chr17 42090469 42090504 -53182147 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 906 214 323 0 0 chr17 42090572 42090637 -53182014 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 1 906 432 329 138 44 chr17 42091549 42091889 -53180762 + MTEa LTR MaLR 1 372 -7 1 906 1522 333 90 60 chr17 42091896 42091992 -53180659 + MTEa-int LTR MaLR 1 100 -1480 1 906 225 0 0 0 chr17 42091992 42092017 -53180634 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1 906 1522 333 90 60 chr17 42092017 42092943 -53179708 + MTEa-int LTR MaLR 101 1054 -526 1 906 1477 220 50 50 chr17 42092943 42093781 -53178870 - L1_Mur1 LINE L1 -6013 969 1 1 906 3774 162 6 3 chr17 42093777 42094444 -53178207 + L1_Mm LINE L1 4858 5526 -357 1 906 430 31 0 0 chr17 42094453 42094518 -53178133 + Lx LINE L1 6590 6654 0 1 906 2763 223 31 31 chr17 42094669 42095280 -53177371 + Lx5 LINE L1 6365 6975 -75 1 906 329 117 17 0 chr17 42095292 42095352 -53177299 + (TAAA)n Simple_repeat Simple_repeat 2 62 0 1 906 492 153 0 0 chr17 42095461 42095546 -53177105 + (TG)n Simple_repeat Simple_repeat 1 85 0 1 906 2902 137 15 13 chr17 42095586 42096059 -53176592 - Lx2B LINE L1 0 7000 6527 1 906 21 0 0 0 chr17 42096709 42096730 -53175921 + AT_rich Low_complexity Low_complexity 1 21 0 1 906 21 0 0 0 chr17 42097180 42097201 -53175450 + AT_rich Low_complexity Low_complexity 1 21 0 1 906 447 19 0 0 chr17 42097863 42097915 -53174736 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 906 801 359 84 49 chr17 42097916 42098425 -53174226 - BLACKJACK DNA AcHobo -2371 573 47 1 906 2577 188 48 27 chr17 42098723 42099432 -53173219 - RMER6C LTR ERVK -38 718 16 1 906 226 205 0 0 chr17 42099412 42099451 -53173200 + B1_Mur2 SINE Alu 68 106 -43 1 906 714 124 29 0 chr17 42099536 42099673 -53172978 - L1_Mus3 LINE L1 -4 6634 6494 1 906 351 0 0 0 chr17 42100902 42100941 -53171710 + (TAA)n Simple_repeat Simple_repeat 1 39 0 1 906 3788 101 2 7 chr17 42101291 42101840 -53170811 + L1Md_F2 LINE L1 6037 6582 0 1 906 354 23 0 0 chr17 42102317 42102360 -53170291 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1 906 22 35 0 0 chr17 42103177 42103206 -53169445 + AT_rich Low_complexity Low_complexity 1 29 0 1 906 24 32 0 0 chr17 42103457 42103488 -53169163 + AT_rich Low_complexity Low_complexity 1 31 0 1 906 401 309 7 75 chr17 42103727 42103874 -53168777 + RSINE1 SINE B4 29 165 0 1 906 412 245 56 9 chr17 42103910 42104017 -53168634 - MTC LTR MaLR -7 414 303 1 906 374 319 121 3 chr17 42104436 42104597 -53168054 + ORR1E LTR MaLR 1 183 -187 1 906 183 146 0 0 chr17 42104740 42104781 -53167870 + (A)n Simple_repeat Simple_repeat 1 41 0 1 906 6171 47 0 10 chr17 42104793 42105572 -53167079 - L1Md_F2 LINE L1 0 6582 5812 1 906 1234 53 0 0 chr17 42105572 42105724 -53166927 + B2_Mm2 SINE B2 13 164 -31 1 906 22 0 0 0 chr17 42105743 42105765 -53166886 + AT_rich Low_complexity Low_complexity 1 22 0 1 906 282 417 52 13 chr17 42105779 42106012 -53166639 - MLT1A0 LTR MaLR -123 242 1 1 906 21 0 0 0 chr17 42106822 42106843 -53165808 + AT_rich Low_complexity Low_complexity 1 21 0 1 906 366 355 78 15 chr17 42107390 42107435 -53165216 + MLT1D LTR MaLR 287 336 -169 1 906 189 74 0 0 chr17 42107435 42107462 -53165189 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1 906 366 355 78 15 chr17 42107462 42107622 -53165029 + MLT1D LTR MaLR 337 505 0 1 906 348 211 0 31 chr17 42108785 42108883 -53163768 - Lx5 LINE L1 -5 7045 6951 1 906 298 342 26 64 chr17 42108890 42109046 -53163605 - LTR50 LTR ERVL -244 551 402 1 906 261 0 0 0 chr17 42109459 42109488 -53163163 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 906 369 0 0 0 chr17 42109488 42109528 -53163123 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 906 756 305 43 7 chr17 42110114 42110395 -53162256 + B4 SINE B4 2 292 0 1 906 189 0 0 0 chr17 42110410 42110431 -53162220 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 906 1878 75 0 0 chr17 42111032 42111271 -53161380 - L1_Mus2 LINE L1 -133 6433 6195 1 906 936 88 7 0 chr17 42111271 42111408 -53161243 + L1_Mus2 LINE L1 6429 6566 0 1 906 612 40 0 0 chr17 42113498 42113573 -53159078 + (GGAA)n Simple_repeat Simple_repeat 3 77 0 1 906 343 349 145 0 chr17 42113584 42113756 -53158895 - MLT2B1 LTR ERVL -235 285 89 1 906 300 305 132 68 chr17 42114119 42114400 -53158251 - RLTR25A LTR ERVK -5 1098 800 1 906 316 55 18 18 chr17 42114768 42114824 -53157827 + (CAAA)n Simple_repeat Simple_repeat 2 57 0 1 906 16119 101 7 4 chr17 42114851 42116760 -53155891 - L1_Mus1 LINE L1 -2 6565 4654 1 906 5777 46 1 11 chr17 42116760 42117483 -53155168 - L1Md_F2 LINE L1 0 6582 5867 1 906 16119 99 4 6 chr17 42117483 42118717 -53153934 - L1_Mus1 LINE L1 -1230 4653 3417 1 906 30517 71 32 1 chr17 42118722 42123724 -53148927 + L1Md_F3 LINE L1 441 5587 -296 1 906 8135 49 0 0 chr17 42123726 42124720 -53147931 + L1Md_F3 LINE L1 5590 6583 -1 1 906 13179 119 6 10 chr17 42124720 42125636 -53147015 - L1_Mus1 LINE L1 -2458 3425 2518 1 906 1191 119 16 0 chr17 42125636 42125821 -53146830 - B2_Mm1a SINE B2 -4 189 2 1 906 13179 99 4 7 chr17 42125821 42128123 -53144528 - L1_Mus1 LINE L1 -3366 2517 218 1 906 371 303 36 87 chr17 42128554 42128749 -53143902 - RLTR25B LTR ERVK -831 197 13 1 906 226 232 35 35 chr17 42128750 42128808 -53143843 - RLTR25B LTR ERVK -1045 58 1 1 906 1955 55 0 42 chr17 42128855 42129119 -53143532 + L1_Mus1 LINE L1 6315 6567 0 1 906 668 301 107 17 chr17 42131813 42132046 -53140605 - MTD LTR MaLR 0 419 166 1 906 267 203 0 0 chr17 42132131 42132190 -53140461 + CT-rich Low_complexity Low_complexity 2 60 0 1 906 986 131 16 64 chr17 42132190 42132378 -53140273 - B2_Mm2 SINE B2 -16 179 1 1 906 754 290 32 4 chr17 42132419 42132665 -53139986 - Lx8 LINE L1 -470 7003 6751 1 906 321 0 61 0 chr17 42133040 42133089 -53139562 + (TTTTTG)n Simple_repeat Simple_repeat 2 53 0 1 906 275 301 35 49 chr17 42133730 42133873 -53138778 - MTEa LTR MaLR 0 379 239 1 906 426 20 0 0 chr17 42133933 42133984 -53138667 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 906 311 336 13 92 chr17 42134012 42134251 -53138400 + Lx9 LINE L1 7107 7326 -318 1 906 2907 185 31 19 chr17 42134299 42134948 -53137703 + Lx5 LINE L1 5949 6605 -445 1 906 17397 88 4 7 chr17 42134943 42137483 -53135168 - L1_Mm LINE L1 -112 5771 3239 1 906 39353 9 0 1 chr17 42137483 42144672 -53127979 - L1Md_A LINE L1 0 6582 1 1 906 2031 88 0 0 chr17 42144670 42144967 -53127684 - L1_Mm LINE L1 -2609 3274 2978 1 906 1303 279 32 21 chr17 42146162 42146502 -53126149 - MTD LTR MaLR -8 411 68 1 906 576 305 57 19 chr17 42147871 42148301 -53124350 + L1_Mur3 LINE L1 4199 4663 -1217 1 906 469 335 39 0 chr17 42148334 42148513 -53124138 + Lx8 LINE L1 7107 7292 -181 1 906 645 228 84 0 chr17 42148555 42148722 -53123929 - Lx6 LINE L1 -26 7434 7254 1 906 413 235 58 10 chr17 42148903 42149006 -53123645 - MLT1D LTR MaLR -373 132 25 1 906 180 226 77 46 chr17 42149409 42149474 -53123177 + MIRb SINE MIR 134 200 -68 1 906 5097 55 1 0 chr17 42149733 42150655 -53121996 - L1Md_F2 LINE L1 -440 6142 5220 1 906 461 228 11 0 chr17 42150655 42150747 -53121904 - MTD LTR MaLR -308 113 21 1 906 723 303 53 35 chr17 42150781 42151279 -53121372 + L1MA5A LINE L1 5422 5905 -1568 1 906 201 119 23 23 chr17 42151503 42151546 -53121105 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1 906 35911 17 1 7 chr17 42151661 42156860 -53115791 + L1Md_A LINE L1 423 5586 -297 1 906 8738 18 0 0 chr17 42156860 42157854 -53114797 + L1Md_A LINE L1 5587 6580 -2 1 906 488 265 25 17 chr17 42158324 42158443 -53114208 + B1_Mur3 SINE Alu 29 148 -1 1 906 280 276 111 7 chr17 42159810 42159945 -53112706 + L1M2 LINE L1 5319 5467 -830 1 906 239 217 0 0 chr17 42160096 42160142 -53112509 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 906 2849 204 113 29 chr17 42160304 42160417 -53112234 - RMER1A Other Other -5 1025 887 2 906 948 65 0 0 chr17 42160417 42160541 -53112110 + (CA)n Simple_repeat Simple_repeat 2 125 0 2 906 2849 268 58 29 chr17 42160541 42162381 -53110270 - RMER1A Other Other -144 886 1 2 906 257 286 12 23 chr17 42162705 42162791 -53109860 + GA-rich Low_complexity Low_complexity 4 88 0 2 906 432 0 0 0 chr17 42162805 42162853 -53109798 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 906 504 258 31 0 chr17 42163684 42163843 -53108808 + L1M2 LINE L1 5504 5667 -645 1 906 674 29 19 0 chr17 42163958 42164063 -53108588 - L1Md_F2 LINE L1 -2 6580 6474 2 906 286 316 61 42 chr17 42164157 42164322 -53108329 + L2a LINE L2 3250 3417 -9 2 906 1144 116 14 37 chr17 42164333 42164548 -53108103 + Lx2 LINE L1 6787 6996 -1 2 906 260 20 82 0 chr17 42164838 42164887 -53107764 + (TA)n Simple_repeat Simple_repeat 1 53 0 2 906 28 0 0 0 chr17 42164912 42164940 -53107711 + AT_rich Low_complexity Low_complexity 1 28 0 2 906 4245 92 24 51 chr17 42165190 42165851 -53106800 - L1_Mus1 LINE L1 0 6567 5925 2 906 381 274 32 8 chr17 42165891 42166016 -53106635 + MTD LTR MaLR 14 141 -278 2 906 5757 110 78 15 chr17 42167398 42167516 -53105135 - Lx LINE L1 -7 6647 6535 2 906 375 23 0 0 chr17 42167516 42167560 -53105091 + (CCAA)n Simple_repeat Simple_repeat 4 47 0 2 906 5757 121 75 12 chr17 42167560 42168877 -53103774 - Lx LINE L1 -120 6534 5139 2 906 2831 150 4 2 chr17 42168866 42169379 -53103272 + L1_Mm LINE L1 4385 4898 -985 2 906 1235 142 0 0 chr17 42170013 42170203 -53102448 + ORR1A4 LTR MaLR 1 190 -139 2 906 4606 123 26 12 chr17 42171071 42171868 -53100783 + Lx3_Mus LINE L1 5718 6525 -484 2 906 26 50 0 0 chr17 42171891 42171931 -53100720 + AT_rich Low_complexity Low_complexity 1 40 0 2 906 510 17 0 0 chr17 42171931 42171990 -53100661 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 906 1119 80 0 0 chr17 42172255 42172406 -53100245 + L1_Mus1 LINE L1 6417 6567 0 2 906 1828 283 69 33 chr17 42173125 42174144 -53098507 - Lx8 LINE L1 0 7644 6453 2 906 1341 198 95 39 chr17 42174144 42174525 -53098126 + RMER16 LTR ERVK 1 533 0 2 906 354 241 0 0 chr17 42174533 42174616 -53098035 - Lx8 LINE L1 -1054 6419 6337 2 906 368 201 148 126 chr17 42174631 42174807 -53097844 + MTD LTR MaLR 5 184 -235 2 906 695 199 28 0 chr17 42174807 42174948 -53097703 + B1_Mus2 SINE Alu 3 147 0 2 906 459 202 0 0 chr17 42174951 42175050 -53097601 + GA-rich Low_complexity Low_complexity 3 101 0 2 906 709 218 112 24 chr17 42175050 42175219 -53097432 + MTD LTR MaLR 197 380 -39 2 906 978 124 0 0 chr17 42175456 42175609 -53097042 + (TTC)n Simple_repeat Simple_repeat 3 155 0 2 906 639 225 182 0 chr17 42176564 42176751 -53095900 + URR1B DNA MER1_type 5 225 0 2 906 320 315 38 45 chr17 42177292 42177425 -53095226 - RMER15 LTR ERVL -42 533 402 2 906 1083 322 85 34 chr17 42178521 42179026 -53093625 + MT2A LTR ERVL 1 531 -2 2 906 1616 257 3 21 chr17 42179086 42179467 -53093184 - ORR1D2-int LTR MaLR -995 375 2 2 906 548 271 103 22 chr17 42179468 42179691 -53092960 - ORR1D2 LTR MaLR 0 370 130 2 906 2175 169 72 5 chr17 42179712 42180099 -53092552 - MTC LTR MaLR -8 413 1 2 906 741 126 0 0 chr17 42180208 42180351 -53092300 + (TC)n Simple_repeat Simple_repeat 2 144 0 2 906 360 0 0 0 chr17 42180351 42180391 -53092260 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 906 186 43 0 0 chr17 42180703 42180726 -53091925 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 906 206 281 31 15 chr17 42182964 42183029 -53089622 + MIR3 SINE MIR 101 166 -42 2 906 435 371 98 25 chr17 42183200 42183526 -53089125 + L1MC4 LINE L1 7275 7624 -418 2 906 21 36 0 0 chr17 42184253 42184281 -53088370 + AT_rich Low_complexity Low_complexity 1 28 0 2 906 1811 79 18 22 chr17 42185446 42185719 -53086932 + Lx LINE L1 6129 6400 -254 2 906 1611 258 111 107 chr17 42185726 42186378 -53086273 - RMER17B LTR ERVK -9 899 321 2 906 1079 82 0 33 chr17 42186378 42186530 -53086121 + B1_Mm SINE Alu 1 147 0 2 906 1611 258 87 131 chr17 42186530 42186884 -53085767 - RMER17B LTR ERVK -561 345 20 2 906 1356 113 0 32 chr17 42186913 42187132 -53085519 + Lx LINE L1 6433 6644 -10 2 906 486 0 0 0 chr17 42187132 42187186 -53085465 + (TAAAA)n Simple_repeat Simple_repeat 2 55 0 2 906 4749 39 19 2 chr17 42188665 42189250 -53083401 - L1Md_F2 LINE L1 0 6582 5988 2 906 320 171 53 0 chr17 42189356 42189432 -53083219 + Lx7 LINE L1 7617 7696 0 2 906 26 64 0 0 chr17 42189513 42189560 -53083091 + AT_rich Low_complexity Low_complexity 1 47 0 2 906 444 335 50 14 chr17 42191338 42191556 -53081095 + Lx8 LINE L1 7070 7295 -178 2 906 329 43 0 21 chr17 42191654 42191702 -53080949 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 906 561 221 147 65 chr17 42191927 42192111 -53080540 + MTE2a LTR MaLR 172 370 -9 2 906 4711 170 69 4 chr17 42192511 42193491 -53079160 + Lx4B LINE L1 5546 6602 -456 2 906 334 282 0 45 chr17 42193497 42193586 -53079065 + RSINE1 SINE B4 48 132 -33 2 906 276 308 26 0 chr17 42194120 42194198 -53078453 + RMER1A Other Other 165 244 -786 2 906 1975 244 39 116 chr17 42194202 42195431 -53077220 + RMER1B Other Other 1 1053 -13 2 906 528 274 17 51 chr17 42195445 42195622 -53077029 + ORR1D2 LTR MaLR 200 370 0 2 906 497 293 33 13 chr17 42195622 42195773 -53076878 + B3A SINE B2 29 182 -16 2 906 219 69 0 0 chr17 42195795 42195824 -53076827 + (CCA)n Simple_repeat Simple_repeat 1 29 0 2 906 456 238 47 18 chr17 42195825 42195996 -53076655 + (CA)n Simple_repeat Simple_repeat 2 177 0 2 906 331 201 65 30 chr17 42195959 42196128 -53076523 + (CACAC)n Simple_repeat Simple_repeat 1 175 0 2 906 1680 241 169 19 chr17 42196732 42197248 -53075403 + RMER19B LTR ERVK 310 902 0 2 906 2315 197 48 48 chr17 42197320 42197881 -53074770 + RLTR31_Mm LTR ERVK 1 561 0 2 906 4015 218 34 16 chr17 42197886 42198856 -53073795 - Lx5 LINE L1 0 7050 6064 2 906 635 250 13 13 chr17 42198908 42199058 -53073593 - B3A SINE B2 -47 151 2 2 906 251 350 39 86 chr17 42199058 42199185 -53073466 + MLT1J LTR MaLR 223 343 -169 2 906 2608 195 57 98 chr17 42199284 42200010 -53072641 - RLTR25B LTR ERVK -1 1027 332 2 906 535 183 29 0 chr17 42200013 42200117 -53072534 - Lx5 LINE L1 -621 6429 6323 2 906 741 161 67 40 chr17 42200253 42200402 -53072249 - RLTR25B LTR ERVK -684 344 192 2 906 303 203 0 0 chr17 42202138 42202207 -53070444 + (TATG)n Simple_repeat Simple_repeat 4 72 0 2 906 445 214 55 0 chr17 42202228 42202373 -53070278 + Lx9 LINE L1 7477 7629 -15 2 906 919 339 11 14 chr17 42203090 42203371 -53069280 - MTEa LTR MaLR -99 280 1 2 113 38485 17 0 6 chr17 42203429 42209874 -53062777 - L1Md_A LINE L1 0 6582 215 2 907 607 343 12 17 chr17 42210163 42210335 -53062316 - B3A SINE B2 -10 188 18 2 907 301 235 9 38 chr17 42210465 42210571 -53062080 + L1MA8 LINE L1 6166 6268 -23 2 907 189 0 0 0 chr17 42210619 42210640 -53062011 + (A)n Simple_repeat Simple_repeat 1 21 0 2 907 275 376 17 0 chr17 42211964 42212081 -53060570 - MER5A1 DNA MER1_type -5 161 43 2 907 4412 85 11 8 chr17 42212266 42212894 -53059757 - L1Md_F2 LINE L1 -3 6579 5950 2 907 30709 91 10 18 chr17 42212894 42218324 -53054327 - L1Md_F LINE L1 -147 5736 349 2 907 2187 108 9 0 chr17 42218421 42218737 -53053914 - ORR1A2 LTR MaLR -8 319 1 2 907 198 0 0 0 chr17 42218766 42218788 -53053863 + (CATTT)n Simple_repeat Simple_repeat 2 23 0 2 907 456 62 0 0 chr17 42218939 42219003 -53053648 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 907 1124 125 0 0 chr17 42219685 42219845 -53052806 + B2_Mm2 SINE B2 1 160 -35 2 907 201 338 28 75 chr17 42219929 42220093 -53052558 - MIRc SINE MIR -66 202 38 2 907 1592 82 20 12 chr17 42220123 42220370 -53052281 - L1_Mus3 LINE L1 0 6638 6390 2 907 5887 106 2 1 chr17 42220375 42221423 -53051228 - L1_Mus3 LINE L1 -574 6064 4946 2 907 15020 141 33 6 chr17 42221422 42224568 -53048083 - L1_Mus3 LINE L1 -2013 3870 647 2 907 181 212 0 0 chr17 42224807 42224840 -53047811 + L2c LINE L2 3305 3337 -50 2 907 444 37 0 0 chr17 42226386 42226440 -53046211 + (TATG)n Simple_repeat Simple_repeat 1 54 0 2 907 482 210 10 29 chr17 42226440 42226543 -53046108 - B3 SINE B2 -87 129 29 2 907 423 0 0 0 chr17 42226543 42226590 -53046061 + (TC)n Simple_repeat Simple_repeat 1 47 0 2 907 3263 77 0 0 chr17 42226620 42227038 -53045613 - L1_Mus1 LINE L1 0 6567 6150 2 907 910 300 77 14 chr17 42227323 42227766 -53044885 + L1MB2 LINE L1 5699 6169 -2 2 907 255 208 0 36 chr17 42228622 42228677 -53043974 + (TATG)n Simple_repeat Simple_repeat 4 56 0 2 907 2569 111 27 34 chr17 42228847 42229257 -53043394 + MTB_Mm LTR MaLR 1 407 0 2 907 593 139 39 10 chr17 42229480 42229582 -53043069 - RMER6C LTR ERVK -585 105 1 2 907 326 269 312 6 chr17 42230582 42230739 -53041912 + L1M4 LINE L1 5348 5552 -632 2 907 512 290 117 47 chr17 42230855 42231112 -53041539 - B4 SINE B4 -4 288 14 2 907 252 0 0 0 chr17 42231631 42231659 -53040992 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 907 377 306 16 135 chr17 42231805 42231990 -53040661 + RSINE1 SINE B4 3 165 0 2 907 235 162 58 29 chr17 42233028 42233276 -53039375 + (TA)n Simple_repeat Simple_repeat 1 255 0 2 907 23 54 0 0 chr17 42233633 42233670 -53038981 + AT_rich Low_complexity Low_complexity 1 37 0 2 907 403 44 59 0 chr17 42233820 42233888 -53038763 + (TTTTG)n Simple_repeat Simple_repeat 1 72 0 2 907 1171 55 14 0 chr17 42233888 42234034 -53038617 - B1_Mus1 SINE Alu 0 148 1 2 907 28 0 0 0 chr17 42234383 42234411 -53038240 + AT_rich Low_complexity Low_complexity 1 28 0 2 907 207 0 0 0 chr17 42235090 42235113 -53037538 + (TTC)n Simple_repeat Simple_repeat 2 24 0 2 907 1549 36 51 68 chr17 42235113 42235349 -53037302 - L1Md_F3 LINE L1 -6 6578 6347 2 907 228 308 0 0 chr17 42235381 42235459 -53037192 + L1MA7 LINE L1 5377 5454 -837 2 907 180 0 0 0 chr17 42235523 42235543 -53037108 + (A)n Simple_repeat Simple_repeat 1 20 0 3 907 730 272 88 34 chr17 42235543 42235961 -53036690 + L1MA7 LINE L1 5572 6012 -279 2 907 317 297 117 0 chr17 42236315 42236426 -53036225 + Lx9 LINE L1 7052 7175 -469 3 907 2658 173 67 24 chr17 42236429 42236969 -53035682 + RLTR20B1 LTR ERVK 1 563 0 3 907 646 296 57 20 chr17 42237010 42237255 -53035396 + Lx9 LINE L1 7212 7465 -179 3 907 534 57 0 0 chr17 42237256 42237326 -53035325 + (TG)n Simple_repeat Simple_repeat 2 71 0 3 907 310 318 181 26 chr17 42237960 42238231 -53034420 + L1MEc LINE L1 377 689 -5711 3 907 1979 78 4 4 chr17 42239377 42239647 -53033004 - L1_Mus2 LINE L1 -3 6563 6294 3 907 513 261 68 126 chr17 42239672 42239825 -53032826 + L1_Mur2 LINE L1 857 1020 -6708 3 907 2533 53 34 0 chr17 42239825 42240148 -53032503 + L1Md_T LINE L1 6249 6582 0 3 907 806 224 143 33 chr17 42240148 42240300 -53032351 + L1_Mur2 LINE L1 941 1106 -5980 3 907 4536 66 2 7 chr17 42240300 42240898 -53031753 - L1Md_F2 LINE L1 0 6582 5988 3 907 5459 210 106 37 chr17 42240898 42242551 -53030100 + L1_Mur2 LINE L1 1107 2882 -2995 3 907 747 196 20 25 chr17 42242551 42242880 -53029771 + GA-rich Low_complexity Low_complexity 1 327 0 3 907 439 301 18 9 chr17 42242880 42242994 -53029657 + polypurine Low_complexity Low_complexity 5 119 0 3 907 348 220 36 52 chr17 42242996 42243319 -53029332 + GA-rich Low_complexity Low_complexity 1 318 0 3 907 1211 94 0 6 chr17 42243319 42243500 -53029151 + (GA)n Simple_repeat Simple_repeat 1 180 0 3 907 2497 180 43 8 chr17 42243532 42244131 -53028520 + L1_Mur2 LINE L1 2862 3481 -2399 3 907 951 155 17 0 chr17 42244137 42244318 -53028333 + Lx3_Mus LINE L1 6143 6326 -683 3 907 2400 125 53 17 chr17 42244319 42244733 -53027918 + Lx3_Mus LINE L1 6538 6966 -43 3 907 193 133 50 30 chr17 42245805 42245906 -53026745 + (TGAG)n Simple_repeat Simple_repeat 2 104 0 3 907 252 206 45 50 chr17 42245939 42246118 -53026533 + (TGAG)n Simple_repeat Simple_repeat 2 179 0 3 907 279 297 71 77 chr17 42246239 42246407 -53026244 + RLTR25A LTR ERVK 937 1103 0 3 907 213 39 0 0 chr17 42246461 42246487 -53026164 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 3 907 413 162 27 0 chr17 42246488 42246562 -53026089 + L1_Mur2 LINE L1 3478 3553 -2327 3 907 1965 53 0 4 chr17 42246637 42246881 -53025770 + L1Md_F2 LINE L1 5344 5586 -297 3 907 7502 64 31 12 chr17 42246881 42247859 -53024792 + L1Md_F2 LINE L1 5587 6582 0 3 907 291 276 54 102 chr17 42248405 42248591 -53024060 + RLTR25B LTR ERVK 852 1028 0 3 907 1184 284 27 10 chr17 42248591 42248880 -53023771 - ORR1D2 LTR MaLR -68 302 9 3 907 613 54 76 0 chr17 42248895 42248987 -53023664 + L1_Mus2 LINE L1 6468 6566 0 3 907 270 160 0 0 chr17 42249860 42249910 -53022741 + (TTGG)n Simple_repeat Simple_repeat 2 51 0 3 907 1048 62 7 46 chr17 42250113 42250265 -53022386 + B1_Mus1 SINE Alu 3 148 0 3 907 972 305 59 37 chr17 42250340 42250799 -53021852 + Lx8 LINE L1 6467 6935 -538 3 907 1230 314 61 50 chr17 42250939 42251747 -53020904 + L1_Mur2 LINE L1 4317 5133 -747 3 907 234 87 0 0 chr17 42251746 42251792 -53020859 + L1Md_F2 LINE L1 6535 6580 -2 3 907 643 297 63 24 chr17 42251813 42252144 -53020507 + L1_Mur2 LINE L1 5102 5407 -473 3 907 585 196 9 0 chr17 42252162 42252274 -53020377 + B1_Mus1 SINE Alu 33 145 -3 3 907 456 186 29 10 chr17 42252297 42252400 -53020251 + L1_Mur2 LINE L1 5475 5579 -721 3 907 1511 322 92 33 chr17 42252531 42253291 -53019360 + Lx8 LINE L1 6659 7463 -10 3 907 256 226 19 0 chr17 42253323 42253376 -53019275 + Lx8 LINE L1 7166 7219 -254 3 907 434 322 52 19 chr17 42253614 42253769 -53018882 - RSINE1 SINE B4 -3 162 3 3 907 338 305 66 44 chr17 42254568 42254705 -53017946 - RMER5 LTR ERV1 -2 532 393 3 907 7684 72 0 8 chr17 42255556 42256644 -53016007 + L1_Mus1 LINE L1 5486 6566 -1 3 907 388 374 35 55 chr17 42256672 42257015 -53015636 + MLT1A LTR MaLR 20 355 -19 3 907 1695 226 9 190 chr17 42257677 42258420 -53014231 - RMER19C LTR ERVK -2 609 1 3 907 229 97 0 0 chr17 42258558 42258589 -53014062 - U2 snRNA snRNA -157 31 1 3 907 34 24 0 0 chr17 42258974 42259015 -53013636 + AT_rich Low_complexity Low_complexity 1 41 0 3 907 700 257 82 27 chr17 42260653 42260909 -53011742 - Lx8 LINE L1 -2 7471 7202 3 907 3546 114 87 18 chr17 42261003 42261564 -53011087 + MT2B LTR ERVL 1 600 -1 3 907 635 285 0 0 chr17 42262238 42262368 -53010283 + B3A SINE B2 1 130 -68 3 907 457 64 0 25 chr17 42262373 42262453 -53010198 + (CA)n Simple_repeat Simple_repeat 1 78 0 3 907 333 0 0 0 chr17 42262852 42262889 -53009762 + (TAA)n Simple_repeat Simple_repeat 2 38 0 3 907 231 300 25 0 chr17 42263084 42263164 -53009487 - ID2 SINE ID -1 82 1 3 907 193 415 38 8 chr17 42263182 42263313 -53009338 + L3 LINE CR1 4268 4402 -87 3 907 254 180 0 91 chr17 42263416 42263471 -53009180 - ID_B1 SINE B4 -7 217 168 3 907 2215 100 37 5 chr17 42264079 42264425 -53008226 + RMER17A LTR ERVK 1 410 -341 3 907 997 91 6 28 chr17 42264425 42264606 -53008045 + (TCTCC)n Simple_repeat Simple_repeat 2 178 0 3 907 1315 157 109 29 chr17 42264606 42264896 -53007755 + RMER17A LTR ERVK 366 874 -15 3 907 675 318 138 47 chr17 42265204 42265775 -53006876 + Tigger9b DNA MER2_type 1 623 -1 3 907 556 328 16 21 chr17 42265949 42266136 -53006515 + MTD LTR MaLR 25 210 -209 3 907 699 231 70 29 chr17 42266218 42266459 -53006192 + L1_Rod LINE L1 5115 5365 -482 3 907 549 174 17 17 chr17 42266460 42266577 -53006074 + Lx9 LINE L1 7374 7490 -154 3 907 261 407 12 0 chr17 42266577 42266658 -53005993 + MER82 DNA MER2_type 486 567 -86 3 907 1006 122 0 7 chr17 42266661 42266795 -53005856 + B1_Mm SINE Alu 1 134 -13 3 907 478 0 32 0 chr17 42266795 42266857 -53005794 + (CAAAA)n Simple_repeat Simple_repeat 1 64 0 3 907 1006 122 0 7 chr17 42266857 42266870 -53005781 + B1_Mm SINE Alu 135 147 0 3 907 214 162 0 0 chr17 42266887 42266924 -53005727 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 907 681 166 0 0 chr17 42266926 42267065 -53005586 + Lx9 LINE L1 7505 7643 -1 3 907 22 56 0 0 chr17 42267068 42267104 -53005547 + AT_rich Low_complexity Low_complexity 1 36 0 3 907 7677 64 11 6 chr17 42267104 42268381 -53004270 - L1Md_F2 LINE L1 0 6582 5299 3 907 316 163 259 21 chr17 42268385 42268480 -53004171 + L1_Rod LINE L1 5422 5600 -703 3 907 637 320 66 20 chr17 42268569 42268767 -53003884 - MER82 DNA MER2_type 0 653 447 3 907 531 333 66 0 chr17 42268880 42269108 -53003543 - MER82 DNA MER2_type -267 386 144 3 907 401 332 5 0 chr17 42269779 42269986 -53002665 + (CA)n Simple_repeat Simple_repeat 1 208 0 3 907 31 44 0 0 chr17 42270177 42270222 -53002429 + AT_rich Low_complexity Low_complexity 1 45 0 3 907 516 293 105 42 chr17 42270538 42270823 -53001828 + L1MA6 LINE L1 5285 5587 -713 3 907 646 293 158 47 chr17 42270869 42270966 -53001685 + L1MA6 LINE L1 5675 5800 -500 3 907 333 0 0 0 chr17 42270966 42271003 -53001648 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 907 646 293 158 47 chr17 42271003 42271457 -53001194 + L1MA6 LINE L1 5801 6287 -13 3 907 256 203 14 42 chr17 42272192 42272264 -53000387 - L1MC4a LINE L1 -668 7374 7305 3 907 644 319 58 87 chr17 42272566 42272878 -52999773 - RMER15 LTR ERVL -16 559 257 3 907 550 267 20 7 chr17 42272913 42273064 -52999587 - ORR1D2 LTR MaLR -2 368 216 3 907 312 253 52 21 chr17 42273238 42273335 -52999316 - RMER15 LTR ERVL -437 138 39 3 907 270 331 61 58 chr17 42273410 42273740 -52998911 - L1MC4a LINE L1 -773 7109 6779 3 907 369 62 0 0 chr17 42273748 42273796 -52998855 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 3 907 230 390 48 24 chr17 42273825 42273951 -52998700 + B1_Mur3 SINE Alu 1 129 -20 3 907 3655 17 0 0 chr17 42273951 42274371 -52998280 + L1Md_A LINE L1 5167 5586 -297 3 907 8370 38 0 0 chr17 42274371 42275367 -52997284 + L1Md_A LINE L1 5587 6582 0 3 907 4397 66 9 3 chr17 42275820 42276401 -52996250 + L1_Mus2 LINE L1 5983 6566 0 3 907 431 94 16 0 chr17 42276507 42276587 -52996064 - L1Md_F2 LINE L1 -252 6330 6277 3 907 1592 67 22 0 chr17 42276587 42276846 -52995805 + L1Md_F2 LINE L1 6354 6582 0 3 907 844 291 10 0 chr17 42276846 42277049 -52995602 + B3 SINE B2 12 216 0 3 907 357 308 28 57 chr17 42277213 42277461 -52995190 - L1MC3 LINE L1 -1216 6569 6329 3 907 279 0 0 0 chr17 42277592 42277623 -52995028 + (A)n Simple_repeat Simple_repeat 1 31 0 3 907 288 0 0 0 chr17 42278212 42278244 -52994407 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 907 810 211 112 12 chr17 42278992 42279251 -52993400 + Lx9 LINE L1 7350 7634 -10 3 907 938 310 80 6 chr17 42280026 42280376 -52992275 + Lx8 LINE L1 6852 7227 -246 3 907 2636 45 15 0 chr17 42280376 42280706 -52991945 - IAPEY_LTR LTR ERVK 0 385 51 3 907 434 281 47 0 chr17 42280833 42280961 -52991690 + B3A SINE B2 43 176 -22 3 907 24 53 0 0 chr17 42280992 42281030 -52991621 + AT_rich Low_complexity Low_complexity 1 38 0 3 907 308 302 182 13 chr17 42282066 42282506 -52990145 - L1M2c LINE L1 -4407 2442 1922 3 907 22 35 0 0 chr17 42283124 42283153 -52989498 + AT_rich Low_complexity Low_complexity 1 29 0 3 907 284 105 35 0 chr17 42283382 42283439 -52989212 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 3 907 1694 204 43 61 chr17 42283656 42284047 -52988604 + ORR1C2 LTR MaLR 1 384 0 3 907 723 287 10 69 chr17 42284275 42284477 -52988174 - B3A SINE B2 0 198 9 3 907 189 68 44 22 chr17 42284612 42284657 -52987994 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 3 907 526 313 88 8 chr17 42284691 42284952 -52987699 + LTR37A LTR ERV1 145 426 0 3 907 2558 120 38 13 chr17 42285635 42286032 -52986619 - MTB_Mm LTR MaLR 0 407 1 3 907 22 35 0 0 chr17 42286091 42286120 -52986531 + AT_rich Low_complexity Low_complexity 1 29 0 3 907 1668 151 28 176 chr17 42286299 42286766 -52985885 + RMER10B LTR ERVL 1 398 0 3 907 902 190 159 0 chr17 42287860 42288055 -52984596 + URR1A DNA MER1_type 1 226 0 3 907 275 338 99 72 chr17 42288797 42289024 -52983627 - ORR1E LTR MaLR 0 359 122 3 907 1358 60 16 0 chr17 42289024 42289209 -52983442 - L1Md_F2 LINE L1 -1 6581 6394 3 907 275 338 99 72 chr17 42289209 42289326 -52983325 - ORR1E LTR MaLR -238 121 6 3 907 467 350 6 42 chr17 42289453 42289620 -52983031 + RSINE1 SINE B4 4 164 -1 3 907 216 167 0 0 chr17 42289621 42289657 -52982994 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 907 968 122 7 0 chr17 42289714 42289861 -52982790 + B1_Mus1 SINE Alu 1 148 0 3 907 261 0 0 0 chr17 42289866 42289895 -52982756 + (A)n Simple_repeat Simple_repeat 1 29 0 3 907 486 0 0 0 chr17 42290061 42290115 -52982536 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 907 404 298 179 6 chr17 42290281 42290460 -52982191 - B3 SINE B2 -2 214 5 3 907 2919 217 51 16 chr17 42290497 42291125 -52981526 + Lx5 LINE L1 6393 7042 -8 3 907 632 259 77 55 chr17 42291492 42291766 -52980885 + Lx9 LINE L1 7208 7487 -157 3 907 436 332 58 5 chr17 42291900 42292106 -52980545 - Tigger6a DNA MER2_type -392 691 475 4 907 1810 166 13 0 chr17 42292564 42292877 -52979774 + ORR1A2 LTR MaLR 3 319 -8 4 907 2823 118 79 0 chr17 42292880 42293322 -52979329 + ORR1A2-int LTR MaLR 3 479 -1484 4 907 293 62 0 20 chr17 42293388 42293437 -52979214 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 907 513 0 0 0 chr17 42293437 42293493 -52979158 + (GA)n Simple_repeat Simple_repeat 2 58 0 4 907 25 31 0 0 chr17 42294692 42294724 -52977927 + AT_rich Low_complexity Low_complexity 1 32 0 4 907 3581 157 64 33 chr17 42294730 42295278 -52977373 + RLTR17 LTR ERVK 1 586 -106 4 907 1165 68 0 0 chr17 42295278 42295425 -52977226 + B1_Mus2 SINE Alu 1 147 0 4 907 3581 157 64 33 chr17 42295425 42295547 -52977104 + RLTR17 LTR ERVK 587 692 0 4 907 262 387 0 9 chr17 42295630 42295737 -52976914 - B3A SINE B2 -92 106 1 4 907 720 317 98 15 chr17 42295893 42296252 -52976399 + L1MA9 LINE L1 4692 5088 -1055 4 907 414 0 0 0 chr17 42296252 42296298 -52976353 + (TTG)n Simple_repeat Simple_repeat 2 47 0 4 907 720 317 98 15 chr17 42296298 42296531 -52976120 + L1MA9 LINE L1 5089 5333 -810 4 907 808 313 36 18 chr17 42296533 42296810 -52975841 - MLT1A1 LTR MaLR -1 407 126 4 907 408 289 115 6 chr17 42297163 42297337 -52975314 + L1MA9 LINE L1 5625 5817 -474 4 907 301 246 0 5 chr17 42298804 42298873 -52973778 + tRNA-Ala-GCY_ tRNA tRNA 2 68 -7 4 907 432 0 0 0 chr17 42298893 42298941 -52973710 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 907 631 332 66 6 chr17 42298948 42299018 -52973633 + L1MA9 LINE L1 5943 6021 -291 4 907 210 37 0 0 chr17 42299018 42299045 -52973606 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 907 631 332 66 6 chr17 42299045 42299322 -52973329 + L1MA9 LINE L1 6022 6310 -2 4 907 262 333 21 11 chr17 42299476 42299570 -52973081 + PB1 SINE Alu 30 124 -3 4 907 268 250 24 12 chr17 42299574 42299659 -52972992 + GA-rich Low_complexity Low_complexity 6 91 0 4 907 2173 230 125 12 chr17 42299801 42300410 -52972241 + Lx3C LINE L1 6311 6996 -4 4 907 8588 100 13 18 chr17 42301181 42302878 -52969773 - L1_Mus2 LINE L1 -3 6563 4877 4 907 7464 68 13 1 chr17 42302878 42303860 -52968791 + L1Md_F2 LINE L1 5589 6582 0 4 907 8588 123 3 17 chr17 42303860 42304180 -52968471 - L1_Mus2 LINE L1 -1007 4876 4564 4 907 470 116 0 0 chr17 42304172 42304241 -52968410 - L1_Mur2 LINE L1 -1966 3911 3843 4 907 313 279 184 12 chr17 42304231 42304394 -52968257 - L1Md_F LINE L1 -5838 681 491 4 907 391 341 27 65 chr17 42305322 42305842 -52966809 + L1MDb LINE L1 793 1292 -5117 4 907 328 317 34 101 chr17 42305872 42306079 -52966572 - B2_Mm2 SINE B2 -2 193 1 4 907 304 273 0 38 chr17 42306744 42306824 -52965827 + ID_B1 SINE B4 95 171 -53 4 907 279 242 33 11 chr17 42306824 42306916 -52965735 + (TATG)n Simple_repeat Simple_repeat 1 94 0 4 907 10512 88 15 16 chr17 42307070 42309288 -52963363 + L1VL2 LINE L1 275 2486 -1129 4 907 1220 151 63 0 chr17 42309286 42309491 -52963160 - L1VL4 LINE L1 -6068 234 17 4 907 753 171 266 17 chr17 42309824 42309997 -52962654 - B3 SINE B2 0 216 1 4 907 748 341 83 4 chr17 42310274 42310539 -52962112 + B4A SINE B4 2 287 -5 4 907 363 267 72 66 chr17 42310539 42310831 -52961820 - ORR1D2 LTR MaLR 0 370 3 4 907 572 338 40 17 chr17 42310866 42311164 -52961487 - Charlie1a DNA MER1_type -1004 451 147 4 907 490 61 12 24 chr17 42311416 42311500 -52961151 + (CAGAGA)n Simple_repeat Simple_repeat 2 84 0 4 907 698 262 124 8 chr17 42311565 42311823 -52960828 - L1MD1 LINE L1 -19 6223 5936 4 907 23 33 0 0 chr17 42311994 42312024 -52960627 + AT_rich Low_complexity Low_complexity 1 30 0 4 907 30437 24 0 0 chr17 42312164 42315771 -52956880 + L1Md_T LINE L1 1980 5586 -297 4 907 8446 34 0 0 chr17 42315771 42316766 -52955885 + L1Md_T LINE L1 5587 6581 -1 4 907 306 261 105 60 chr17 42316771 42316971 -52955680 - L1MD1 LINE L1 -607 5752 5544 4 907 186 43 0 0 chr17 42317000 42317023 -52955628 + (TTGG)n Simple_repeat Simple_repeat 1 23 0 4 907 838 184 0 0 chr17 42317024 42317171 -52955480 - B1_Mm SINE Alu 0 147 1 4 907 855 278 79 23 chr17 42318708 42319050 -52953601 - Lx8 LINE L1 -2 7471 7111 4 907 1175 246 112 13 chr17 42319072 42319385 -52953266 - Lx8 LINE L1 -688 6785 6442 4 907 417 331 32 19 chr17 42319608 42319765 -52952886 - Tigger5 DNA MER2_type -2234 172 14 4 907 382 345 104 78 chr17 42320457 42320765 -52951886 - MLT1A0 LTR MaLR 0 365 50 4 907 1043 314 82 10 chr17 42320771 42321160 -52951491 + MTD LTR MaLR 1 417 -2 4 907 285 75 0 0 chr17 42321259 42321299 -52951352 + (TTG)n Simple_repeat Simple_repeat 2 41 0 4 907 864 286 18 48 chr17 42321300 42321702 -52950949 + MTC-int LTR MaLR 47 526 -732 4 907 1508 219 176 94 chr17 42321754 42322242 -52950409 + RMER19B LTR ERVK 357 884 -18 4 907 309 291 87 54 chr17 42322783 42322932 -52949719 - HAL1-3A_ME LINE L1 -419 2439 2286 4 907 26 50 0 0 chr17 42323292 42323332 -52949319 + AT_rich Low_complexity Low_complexity 1 40 0 4 907 244 237 106 106 chr17 42323332 42323417 -52949234 + MTC-int LTR MaLR 975 1059 -521 4 907 539 268 215 67 chr17 42323443 42323815 -52948836 + MTD-int LTR MaLR 818 1244 -14 4 907 864 296 56 64 chr17 42323829 42324237 -52948414 + MTD LTR MaLR 1 405 -14 4 907 22 35 0 0 chr17 42324678 42324707 -52947944 + AT_rich Low_complexity Low_complexity 1 29 0 4 907 1507 188 104 37 chr17 42324728 42325082 -52947569 - ORR1C1 LTR MaLR 0 378 1 4 907 384 22 0 0 chr17 42325537 42325582 -52947069 + (TC)n Simple_repeat Simple_repeat 1 45 0 4 907 727 308 50 17 chr17 42325602 42325843 -52946808 - Lx8 LINE L1 -155 7318 7070 4 907 392 255 0 21 chr17 42325840 42325936 -52946715 + Lx8 LINE L1 6944 7037 -436 4 907 1838 202 16 31 chr17 42326036 42326424 -52946227 + RLTR14 LTR ERV1 1 382 0 4 907 21 36 0 0 chr17 42326997 42327025 -52945626 + AT_rich Low_complexity Low_complexity 1 28 0 4 907 270 0 0 0 chr17 42327893 42327923 -52944728 + (GA)n Simple_repeat Simple_repeat 1 30 0 4 907 251 308 37 18 chr17 42327994 42328103 -52944548 - 7SK RNA RNA -20 311 201 4 907 495 49 39 54 chr17 42328106 42328235 -52944416 + (TTTTTG)n Simple_repeat Simple_repeat 5 131 0 4 907 404 372 38 16 chr17 42328240 42328423 -52944228 - 7SK RNA RNA -144 187 1 4 907 22 0 0 0 chr17 42328429 42328451 -52944200 + AT_rich Low_complexity Low_complexity 1 22 0 4 907 934 59 0 0 chr17 42328564 42328683 -52943968 + B1_Mus1 SINE Alu 30 148 0 4 907 250 298 66 37 chr17 42328725 42328861 -52943790 + L1MC3 LINE L1 6710 6849 -936 4 907 285 327 110 30 chr17 42329832 42329996 -52942655 + B4A SINE B4 18 194 -98 4 907 390 42 0 0 chr17 42330056 42330104 -52942547 + (TC)n Simple_repeat Simple_repeat 1 48 0 4 907 477 0 0 0 chr17 42330116 42330169 -52942482 + (GA)n Simple_repeat Simple_repeat 2 54 0 4 907 290 384 32 57 chr17 42330174 42330420 -52942231 + L1MA6 LINE L1 197 436 -6898 4 907 997 53 8 0 chr17 42330440 42330573 -52942078 - B1_Mm SINE Alu 0 147 14 4 907 207 229 0 0 chr17 42330912 42330973 -52941678 + A-rich Low_complexity Low_complexity 1 61 0 4 907 277 275 232 19 chr17 42331029 42331296 -52941355 + L1MA6 LINE L1 854 1177 -6157 4 907 377 291 102 44 chr17 42331377 42331582 -52941069 + L1MA6 LINE L1 1441 1657 -5677 4 907 2058 234 91 25 chr17 42331584 42332024 -52940627 + Lx6 LINE L1 6660 7123 -337 4 907 531 101 0 0 chr17 42332024 42332103 -52940548 + (CATA)n Simple_repeat Simple_repeat 2 80 0 4 907 2058 234 91 25 chr17 42332103 42332188 -52940463 + Lx6 LINE L1 7124 7219 -241 4 907 10655 103 12 1 chr17 42332193 42334547 -52938104 - L1_Mus3 LINE L1 0 6638 4255 4 907 2343 197 165 25 chr17 42334551 42335156 -52937495 - RMER6C LTR ERVK 0 690 1 4 907 37 39 0 0 chr17 42335304 42335355 -52937296 + AT_rich Low_complexity Low_complexity 1 51 0 4 907 423 326 104 26 chr17 42335460 42335845 -52936806 + L1MA6 LINE L1 1804 2275 -4812 4 907 502 296 90 20 chr17 42335877 42336077 -52936574 + B3 SINE B2 3 216 0 4 908 21 0 0 0 chr17 42336507 42336528 -52936123 + AT_rich Low_complexity Low_complexity 1 21 0 4 908 468 266 110 42 chr17 42336591 42337170 -52935481 + L1MA6 LINE L1 5755 6351 -809 4 908 243 0 0 0 chr17 42337299 42337326 -52935325 + (TTTG)n Simple_repeat Simple_repeat 4 30 0 4 908 4504 150 26 23 chr17 42337334 42338313 -52934338 - L1_Mus3 LINE L1 -3 6635 5587 4 908 9184 125 31 24 chr17 42338330 42340660 -52931991 - L1VL1 LINE L1 -1188 2510 137 4 908 5455 99 36 8 chr17 42340660 42341446 -52931205 + RLTR13C2 LTR ERVK 1 808 0 4 908 5982 153 48 50 chr17 42341446 42341607 -52931044 - L1VL1 LINE L1 -6286 136 2 4 908 496 313 78 21 chr17 42341640 42341711 -52930940 + L1MA6 LINE L1 6530 6604 -556 4 908 1102 284 73 0 chr17 42341711 42342053 -52930598 - ORR1D2 LTR MaLR -3 367 1 4 908 496 313 78 21 chr17 42342053 42342314 -52930337 + L1MA6 LINE L1 6605 6881 -279 4 908 414 290 77 83 chr17 42342507 42342676 -52929975 + B4 SINE B4 3 170 -122 4 908 466 263 152 0 chr17 42342695 42342893 -52929758 + L1M4 LINE L1 2686 2913 -3233 4 908 704 280 87 12 chr17 42342893 42343146 -52929505 - Tigger1 DNA MER2_type -162 2256 1985 4 908 596 261 253 6 chr17 42343126 42343450 -52929201 - Tigger1 DNA MER2_type -1475 943 540 4 908 230 346 41 68 chr17 42343609 42343755 -52928896 - MIR SINE MIR -113 149 8 4 908 1573 233 78 33 chr17 42345092 42345602 -52927049 - Lx7 LINE L1 -1501 6195 5663 4 908 414 0 0 0 chr17 42346019 42346065 -52926586 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 908 250 178 0 1 chr17 42346065 42346111 -52926540 + L1_Mur3 LINE L1 2645 2695 -3185 4 908 4981 159 35 30 chr17 42346176 42347948 -52924703 + L1Md_F LINE L1 310 1992 -3891 4 908 35568 42 19 38 chr17 42347975 42352439 -52920212 + L1_Mus2 LINE L1 452 4875 -1691 4 908 226 160 45 148 chr17 42352439 42352527 -52920124 - RMER20A LTR ERVK -268 248 170 4 908 35568 42 19 38 chr17 42352527 42354231 -52918420 + L1_Mus2 LINE L1 4876 6565 -1 4 908 427 267 116 23 chr17 42354261 42354564 -52918087 + L1M4 LINE L1 2797 3127 -3019 4 908 1422 286 88 30 chr17 42354554 42355354 -52917297 + L1M2 LINE L1 3486 4331 -1812 4 908 406 84 0 88 chr17 42355353 42355444 -52917207 - Lx LINE L1 -21 6633 6551 4 908 695 161 0 0 chr17 42355441 42355553 -52917098 - Lx LINE L1 -360 6294 6183 4 908 385 302 102 17 chr17 42355697 42356048 -52916603 + L1M2 LINE L1 4500 4925 -1218 4 908 638 304 111 66 chr17 42356352 42356884 -52915767 - Lx7 LINE L1 -29 7444 6886 4 908 2383 143 12 2 chr17 42357346 42357752 -52914899 + Lx2 LINE L1 6586 6995 -2 4 908 712 234 35 45 chr17 42359831 42360032 -52912619 + Lx5 LINE L1 6835 7033 -17 4 908 297 151 0 0 chr17 42360083 42360136 -52912515 + GA-rich Low_complexity Low_complexity 2 54 0 4 908 218 32 32 0 chr17 42361247 42361278 -52911373 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 4 908 1845 125 3 3 chr17 42361427 42361723 -52910928 - L1_Mus2 LINE L1 -2 6564 6269 4 908 14952 74 8 22 chr17 42361730 42362881 -52909770 - L1Md_F2 LINE L1 -12 6570 5427 4 908 7080 55 14 1 chr17 42362881 42363763 -52908888 + RLTR13B1 LTR ERVK 1 893 0 4 908 14952 181 31 123 chr17 42363763 42364216 -52908435 - L1Md_F2 LINE L1 -457 5426 5016 4 908 1994 144 60 75 chr17 42364216 42364615 -52908036 + RLTR9C LTR ERVK 1 393 0 4 908 16444 181 31 123 chr17 42364615 42366411 -52906240 - L1Md_F2 LINE L1 0 5886 3575 4 908 3892 46 0 0 chr17 42366411 42366886 -52905765 - L1Md_F2 LINE L1 -12 6570 6096 4 908 16444 182 194 16 chr17 42366886 42367426 -52905225 - L1Md_F2 LINE L1 -1561 4325 3094 4 908 3042 55 39 0 chr17 42367426 42367807 -52904844 + MTA_Mm LTR MaLR 1 396 0 5 908 16444 185 139 39 chr17 42367807 42370498 -52902153 - L1Md_F2 LINE L1 -2793 3093 509 4 908 7347 86 6 1 chr17 42370497 42371498 -52901153 + L1_Mur1 LINE L1 4872 5877 -9 5 908 6095 89 57 40 chr17 42371514 42372480 -52900171 + Lx3_Mus LINE L1 5987 6968 -41 5 908 496 288 44 62 chr17 42372480 42372621 -52900030 - RMER12 LTR ERVK 0 1322 1188 5 908 4655 69 3 2 chr17 42372621 42373218 -52899433 + L1_Mus1 LINE L1 5970 6567 0 5 908 496 241 115 97 chr17 42373218 42373376 -52899275 - RMER12 LTR ERVK -135 1187 1102 5 908 5835 74 16 4 chr17 42373551 42374365 -52898286 - RLTR22_Mus LTR ERVK -984 824 1 5 908 273 85 0 0 chr17 42374365 42374412 -52898239 + Lx3_Mus LINE L1 6963 7009 0 5 908 504 294 68 12 chr17 42374529 42374777 -52897874 + L1MA4 LINE L1 4650 4911 -1232 5 908 354 247 150 11 chr17 42374863 42375043 -52897608 + L1MA4 LINE L1 5084 5288 -855 5 908 321 317 91 0 chr17 42375073 42375259 -52897392 + L1MA4 LINE L1 5342 5544 -756 5 908 207 0 0 0 chr17 42375283 42375306 -52897345 + (TAA)n Simple_repeat Simple_repeat 2 24 0 5 908 8286 14 0 0 chr17 42375317 42376254 -52896397 + L1Md_A LINE L1 5646 6582 0 5 908 661 278 140 24 chr17 42376279 42376743 -52895908 + L1MA4 LINE L1 5661 6178 -122 5 908 1837 164 48 56 chr17 42376934 42377309 -52895342 + ORR1C1 LTR MaLR 5 376 -2 5 908 1049 241 94 56 chr17 42377522 42377882 -52894769 + MTE2a LTR MaLR 1 374 -5 5 908 615 316 37 37 chr17 42378884 42379157 -52893494 + B4A SINE B4 2 274 -18 5 908 243 0 0 0 chr17 42379196 42379223 -52893428 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 908 702 285 132 27 chr17 42379999 42380331 -52892320 + Lx8 LINE L1 7101 7467 -6 5 908 1237 225 4 24 chr17 42381408 42381654 -52890997 + ORR1D2 LTR MaLR 126 366 -4 5 908 4505 61 3 0 chr17 42382023 42382595 -52890056 + L1Md_F2 LINE L1 5997 6570 -12 5 908 1156 82 0 11 chr17 42382638 42382898 -52889753 + (GAA)n Simple_repeat Simple_repeat 1 257 0 5 908 25 31 0 0 chr17 42385233 42385265 -52887386 + AT_rich Low_complexity Low_complexity 1 32 0 5 908 813 180 46 23 chr17 42385463 42385679 -52886972 + Lx9 LINE L1 7423 7643 -1 5 908 339 154 0 0 chr17 42386010 42386075 -52886576 + GA-rich Low_complexity Low_complexity 2 66 0 5 908 187 296 53 106 chr17 42386114 42386284 -52886367 + L2 LINE L2 2234 2394 -1025 5 908 949 64 0 14 chr17 42386310 42386453 -52886198 - L1Md_F2 LINE L1 -1 6581 6441 5 908 847 320 53 35 chr17 42387354 42387863 -52884788 + L1MA6 LINE L1 5783 6300 0 5 908 701 319 82 36 chr17 42387851 42388411 -52884240 + L1MB1 LINE L1 5483 6068 -100 5 908 441 336 20 40 chr17 42388466 42388615 -52884036 + RSINE1 SINE B4 3 148 -17 5 908 306 0 0 0 chr17 42388629 42388663 -52883988 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 908 378 0 0 0 chr17 42389718 42389760 -52882891 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 908 308 129 48 0 chr17 42390003 42390065 -52882586 + G-rich Low_complexity Low_complexity 5 69 0 5 908 959 183 19 37 chr17 42390977 42391193 -52881458 + Lx3C LINE L1 6758 6969 -7 5 908 378 0 0 0 chr17 42391196 42391238 -52881413 + (TAA)n Simple_repeat Simple_repeat 1 42 0 5 908 929 309 30 40 chr17 42392153 42392557 -52880094 + Lx8 LINE L1 6748 7147 -326 5 908 853 277 76 35 chr17 42392692 42392980 -52879671 + Lx8 LINE L1 7169 7468 -5 5 908 342 313 29 25 chr17 42393198 42393342 -52879309 + MIR SINE MIR 18 165 -111 5 908 324 0 0 0 chr17 42393670 42393706 -52878945 + (TAA)n Simple_repeat Simple_repeat 3 38 0 5 908 1876 180 27 11 chr17 42394132 42394502 -52878149 - ORR1C1 LTR MaLR -2 376 1 5 908 424 235 33 22 chr17 42394749 42394889 -52877762 - MTD LTR MaLR -276 145 4 5 908 182 326 133 31 chr17 42394994 42395092 -52877559 + MIRc SINE MIR 76 183 -85 5 908 447 285 75 14 chr17 42395919 42396065 -52876586 - MLT1A1 LTR MaLR -6 402 248 5 908 3465 15 5 0 chr17 42397956 42398350 -52874301 - MTA_Mm LTR MaLR 0 396 1 5 908 4692 205 45 52 chr17 42399530 42400731 -52871920 + MYSERV6-int LTR ERVK 4997 6189 -2770 5 908 5419 95 28 15 chr17 42400731 42401910 -52870741 + L1_Mus2 LINE L1 5189 6384 -182 5 908 422 87 12 27 chr17 42401888 42401965 -52870686 + L1_Mus2 LINE L1 6480 6592 -46 5 908 1224 41 0 0 chr17 42401965 42402111 -52870540 - B1_Mm SINE Alu -1 146 1 5 908 270 167 57 129 chr17 42402111 42402157 -52870494 + L1_Mus2 LINE L1 6593 6638 0 5 908 471 271 86 33 chr17 42402291 42402502 -52870149 + RLTR9E LTR ERVK 148 407 -2 5 908 21 36 0 0 chr17 42403278 42403306 -52869345 + AT_rich Low_complexity Low_complexity 1 28 0 5 908 303 287 43 0 chr17 42404247 42404341 -52868310 - LTR88a LTR Gypsy -460 356 259 5 908 419 85 0 0 chr17 42404963 42405022 -52867629 + Lx2 LINE L1 6591 6649 -348 5 908 1668 117 4 0 chr17 42405022 42405279 -52867372 + Lx LINE L1 6396 6653 -1 5 908 307 345 103 0 chr17 42405635 42405780 -52866871 + RSINE1 SINE B4 6 165 0 5 908 462 36 0 0 chr17 42405836 42405892 -52866759 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 908 495 0 0 0 chr17 42406267 42406322 -52866329 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 908 311 364 16 8 chr17 42406848 42406970 -52865681 - MIR SINE MIR -27 235 113 5 908 22 0 0 0 chr17 42407322 42407344 -52865307 + AT_rich Low_complexity Low_complexity 1 22 0 5 908 799 271 35 39 chr17 42407986 42408270 -52864381 + Lx8 LINE L1 6937 7219 -254 5 908 1466 142 82 25 chr17 42408261 42408542 -52864109 + Lx2 LINE L1 6699 6995 -2 5 908 412 281 91 30 chr17 42409299 42409431 -52863220 + B4A SINE B4 2 141 -151 5 908 2098 231 38 48 chr17 42409520 42410124 -52862527 + L1_Mur3 LINE L1 512 1109 -6619 5 908 7467 118 32 1 chr17 42410119 42411288 -52861363 - L1_Mm LINE L1 -1347 4536 3331 5 908 5689 190 134 60 chr17 42411281 42411868 -52860783 + L1_Mur3 LINE L1 2302 2988 -2892 5 908 452 48 16 0 chr17 42411868 42411931 -52860720 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 5 908 5689 190 134 60 chr17 42411931 42413008 -52859643 + L1_Mur3 LINE L1 2989 4091 -1789 5 908 393 163 0 0 chr17 42413046 42413138 -52859513 + (TG)n Simple_repeat Simple_repeat 2 93 0 5 908 583 234 61 50 chr17 42413174 42413354 -52859297 - B3A SINE B2 -16 182 1 5 908 548 275 80 35 chr17 42414310 42414510 -52858141 + B3 SINE B2 5 213 -3 5 908 247 214 76 8 chr17 42414542 42414674 -52857977 + (TA)n Simple_repeat Simple_repeat 2 142 0 5 908 21 71 0 0 chr17 42414682 42414724 -52857927 + AT_rich Low_complexity Low_complexity 1 42 0 5 908 180 321 57 45 chr17 42415177 42415265 -52857386 - L2a LINE L2 -50 3376 3288 5 908 1550 273 40 25 chr17 42415354 42415828 -52856823 - Lx6 LINE L1 0 7460 6980 5 908 1584 198 12 9 chr17 42416828 42417160 -52855491 - Lx4B LINE L1 0 7058 6726 5 908 2562 154 0 0 chr17 42417160 42417568 -52855083 + Lx4B LINE L1 6253 6660 -398 5 908 7015 83 35 10 chr17 42417570 42418568 -52854083 - RLTR13D5 LTR ERVK 0 1023 1 5 908 382 333 82 50 chr17 42419164 42419505 -52853146 - L1MA9 LINE L1 -157 6155 5804 5 908 325 254 14 9 chr17 42419557 42419665 -52852986 - L1MA9 LINE L1 -667 5633 5522 5 908 625 76 42 0 chr17 42419716 42419834 -52852817 + (TC)n Simple_repeat Simple_repeat 1 123 0 5 908 735 151 0 0 chr17 42419834 42419960 -52852691 + (TAGA)n Simple_repeat Simple_repeat 2 127 0 5 908 891 84 99 0 chr17 42420192 42420323 -52852328 + B1_Mus2 SINE Alu 2 145 -2 5 908 708 12 0 0 chr17 42420326 42420407 -52852244 + (GA)n Simple_repeat Simple_repeat 2 82 0 5 908 462 345 66 20 chr17 42420951 42421102 -52851549 - RSINE1 SINE B4 -6 159 2 5 908 813 217 48 21 chr17 42421889 42422077 -52850574 + RMER1C Other Other 1033 1225 -117 5 908 744 133 0 0 chr17 42422077 42422197 -52850454 + (TTC)n Simple_repeat Simple_repeat 3 122 0 5 908 628 168 37 22 chr17 42422208 42422342 -52850309 + RMER1C Other Other 1203 1338 -4 5 908 3359 49 0 0 chr17 42424184 42424595 -52848056 + L1Md_F3 LINE L1 6174 6584 0 5 908 2249 201 86 80 chr17 42424904 42425157 -52847494 + RMER15 LTR ERVL 1 221 -354 5 908 2552 29 40 28 chr17 42425157 42425480 -52847171 - IAPLTR2b LTR ERVK 0 327 1 5 908 2249 201 86 80 chr17 42425480 42425798 -52846853 + RMER15 LTR ERVL 222 575 0 5 908 202 48 70 23 chr17 42426378 42426421 -52846230 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 5 908 486 166 22 54 chr17 42426441 42426626 -52846025 - RMER17C LTR ERVK -135 275 97 5 908 645 343 69 29 chr17 42427618 42427894 -52844757 + Tigger7 DNA MER2_type 4 290 -2201 5 908 1401 308 116 29 chr17 42428059 42428608 -52844043 - Lx8 LINE L1 -504 6969 6365 5 908 1952 152 14 85 chr17 42428608 42429031 -52843620 - RLTR9C LTR ERVK 0 393 1 5 908 1401 308 116 29 chr17 42429031 42429094 -52843557 - Lx8 LINE L1 -1109 6364 6304 5 908 448 292 47 13 chr17 42429487 42429636 -52843015 + RSINE1 SINE B4 6 159 -6 5 908 495 279 0 0 chr17 42429739 42429850 -52842801 + ID_B1 SINE B4 83 193 -31 5 908 388 312 58 7 chr17 42429740 42429879 -52842772 + B1F SINE Alu 3 148 -1 5 908 461 333 0 8 chr17 42429967 42430094 -52842557 + B1_Mus1 SINE Alu 10 135 -13 5 908 240 227 30 15 chr17 42430138 42430205 -52842446 + B3A SINE B2 2 69 -129 5 908 573 311 73 13 chr17 42430497 42430813 -52841838 + L1MA6 LINE L1 5966 6300 0 5 908 21 0 0 0 chr17 42430849 42430870 -52841781 + AT_rich Low_complexity Low_complexity 1 21 0 5 908 1600 249 10 31 chr17 42431001 42431387 -52841264 + MTD LTR MaLR 3 380 -39 5 908 183 403 0 0 chr17 42431731 42431798 -52840853 + L2c LINE L2 3291 3357 -30 5 908 432 0 0 0 chr17 42432183 42432231 -52840420 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 908 768 122 0 0 chr17 42432234 42432357 -52840294 + (GA)n Simple_repeat Simple_repeat 2 124 0 5 908 349 268 0 0 chr17 42432399 42432481 -52840170 + BC1_Mm scRNA scRNA 10 91 -61 5 908 240 235 40 10 chr17 42433503 42433602 -52839049 + (TATAA)n Simple_repeat Simple_repeat 5 106 0 5 908 1218 251 54 62 chr17 42433996 42434348 -52838303 - ORR1E LTR MaLR -8 351 3 5 908 403 304 17 9 chr17 42434831 42434947 -52837704 + MIR3 SINE MIR 91 207 -1 5 908 1144 61 0 7 chr17 42435736 42435884 -52836767 + B1_Mm SINE Alu 1 147 0 5 908 279 0 0 0 chr17 42435987 42436018 -52836633 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 908 672 141 0 0 chr17 42436018 42436153 -52836498 + (GA)n Simple_repeat Simple_repeat 2 136 0 6 908 575 338 0 0 chr17 42436153 42436295 -52836356 - B3A SINE B2 -56 142 1 6 908 383 291 109 10 chr17 42437518 42437719 -52834932 + Helitron1Na_Mam RC Helitron 82 302 -760 6 908 450 36 0 0 chr17 42437740 42437796 -52834855 + (TA)n Simple_repeat Simple_repeat 2 57 0 6 908 2106 104 3 0 chr17 42438102 42438400 -52834251 - Lx LINE L1 -254 5629 5331 6 908 5073 113 149 14 chr17 42438399 42439276 -52833375 + Lx LINE L1 5639 6634 -20 6 908 300 103 88 150 chr17 42439276 42439356 -52833295 + Lx LINE L1 6311 6385 -269 6 908 180 0 0 0 chr17 42439472 42439492 -52833159 + (C)n Simple_repeat Simple_repeat 1 20 0 6 908 334 221 11 11 chr17 42439511 42439598 -52833053 + Lx8 LINE L1 7028 7114 -359 6 908 243 0 0 0 chr17 42439614 42439641 -52833010 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 908 276 232 36 12 chr17 42439665 42439748 -52832903 + Lx8 LINE L1 7389 7473 0 6 908 408 330 32 58 chr17 42441367 42441557 -52831094 + MIRb SINE MIR 35 219 -49 6 908 3699 54 0 2 chr17 42442876 42443336 -52829315 - L1_Mus2 LINE L1 0 6566 6108 6 908 391 257 144 94 chr17 42444072 42444226 -52828425 + B3 SINE B2 2 173 -43 6 908 483 18 0 0 chr17 42444226 42444282 -52828369 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 908 391 257 144 94 chr17 42444282 42444329 -52828322 + B3 SINE B2 174 213 -3 6 908 26 0 0 0 chr17 42445418 42445444 -52827207 + AT_rich Low_complexity Low_complexity 1 26 0 6 908 396 220 0 0 chr17 42446156 42446274 -52826377 + GA-rich Low_complexity Low_complexity 1 118 0 6 908 389 336 80 7 chr17 42446274 42446412 -52826239 + B4A SINE B4 125 272 -20 6 908 1272 53 0 0 chr17 42446413 42446582 -52826069 + (CA)n Simple_repeat Simple_repeat 2 170 0 6 908 216 0 0 0 chr17 42446582 42446605 -52826046 + (GA)n Simple_repeat Simple_repeat 2 25 0 6 908 275 369 18 9 chr17 42446731 42446843 -52825808 - B4A SINE B4 -136 156 44 6 908 684 328 191 23 chr17 42447242 42447635 -52825016 + MLT1L LTR MaLR 100 558 -52 6 908 222 206 0 40 chr17 42447680 42447756 -52824895 + (TA)n Simple_repeat Simple_repeat 1 73 0 6 908 770 94 8 0 chr17 42447756 42447873 -52824778 + (TG)n Simple_repeat Simple_repeat 1 118 0 6 908 1182 290 108 83 chr17 42449052 42449314 -52823337 + L1MC3 LINE L1 6452 6742 -1043 6 908 484 16 0 0 chr17 42449314 42449377 -52823274 - L1Md_T LINE L1 0 6582 6520 6 908 1182 290 108 83 chr17 42449377 42449543 -52823108 + L1MC3 LINE L1 6743 6877 -908 6 908 1122 88 0 0 chr17 42449543 42449690 -52822961 + B1_Mm SINE Alu 1 147 0 6 908 1182 290 108 83 chr17 42449690 42450468 -52822183 + L1MC3 LINE L1 6878 7690 -95 6 908 200 376 32 0 chr17 42450941 42451034 -52821617 + MIR SINE MIR 47 142 -66 6 908 784 240 24 42 chr17 42451192 42451405 -52821246 - B3 SINE B2 -6 210 2 6 908 186 43 0 0 chr17 42451791 42451814 -52820837 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 6 908 501 32 0 0 chr17 42452526 42452589 -52820062 + (CA)n Simple_repeat Simple_repeat 1 63 0 6 908 318 106 0 0 chr17 42454411 42454458 -52818193 + (A)n Simple_repeat Simple_repeat 1 47 0 6 908 378 0 0 0 chr17 42454732 42454774 -52817877 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 908 423 0 0 0 chr17 42455224 42455271 -52817380 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 908 511 117 21 0 chr17 42458260 42458354 -52814297 + (TA)n Simple_repeat Simple_repeat 2 97 0 6 908 306 291 88 26 chr17 42458490 42458603 -52814048 - MIRb SINE MIR -114 154 35 6 908 426 108 0 0 chr17 42458696 42458770 -52813881 + (GGA)n Simple_repeat Simple_repeat 3 76 0 6 908 207 404 33 46 chr17 42459143 42459296 -52813355 + MIR3 SINE MIR 32 182 -26 6 908 577 291 80 97 chr17 42461133 42461433 -52811218 + MER2 DNA MER2_type 17 311 -34 6 908 266 357 125 28 chr17 42461757 42462005 -52810646 - L2b LINE L2 -32 3343 3072 6 908 278 296 70 31 chr17 42462318 42462447 -52810204 - MER5A1 DNA MER1_type -32 134 1 6 908 371 302 50 95 chr17 42463139 42463287 -52809364 + MER5A DNA MER1_type 9 137 -41 6 908 298 74 37 0 chr17 42464211 42464265 -52808386 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 908 227 143 0 31 chr17 42464587 42464652 -52807999 + T-rich Low_complexity Low_complexity 1 63 0 6 908 339 191 0 0 chr17 42465264 42465332 -52807319 + (CATA)n Simple_repeat Simple_repeat 1 68 0 6 908 439 339 54 0 chr17 42466276 42466406 -52806245 - ID_B1 SINE B4 -2 222 86 6 908 197 304 74 25 chr17 42466467 42466548 -52806103 + MIR SINE MIR 70 154 -108 6 908 277 219 14 0 chr17 42466626 42466699 -52805952 - Lx3C LINE L1 -2 6974 6901 6 908 249 166 18 52 chr17 42466697 42466774 -52805877 + Lx2B LINE L1 6707 6780 -220 6 909 341 321 44 9 chr17 42467411 42467524 -52805127 + MER5B DNA MER1_type 56 172 -6 6 909 672 190 18 104 chr17 42467601 42467765 -52804886 + B1_Mur4 SINE Alu 1 150 0 6 909 351 0 0 0 chr17 42467767 42467806 -52804845 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 909 621 299 54 0 chr17 42468475 42468642 -52804009 + ID_B1 SINE B4 1 176 -48 6 909 264 100 0 0 chr17 42468726 42468766 -52803885 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 6 909 441 0 0 0 chr17 42469333 42469382 -52803269 + (TA)n Simple_repeat Simple_repeat 2 50 0 6 909 303 239 0 0 chr17 42469727 42469798 -52802853 - L1MA4 LINE L1 -370 5930 5860 6 909 245 269 215 21 chr17 42471507 42471651 -52801000 - MIR SINE MIR -32 230 59 6 909 247 299 0 25 chr17 42472863 42472942 -52799709 - MER20 DNA MER1_type -134 85 9 6 909 384 320 104 27 chr17 42474105 42474266 -52798385 - MLT1A LTR MaLR 0 374 205 6 909 279 0 0 0 chr17 42474266 42474297 -52798354 + (TC)n Simple_repeat Simple_repeat 1 31 0 6 909 384 259 530 42 chr17 42474297 42474432 -52798219 - MLT1A LTR MaLR -170 204 2 6 909 714 234 130 0 chr17 42475665 42475842 -52796809 + B3 SINE B2 2 202 -14 6 909 576 0 0 0 chr17 42475842 42475906 -52796745 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 6 909 22 0 0 0 chr17 42476178 42476200 -52796451 + AT_rich Low_complexity Low_complexity 1 22 0 6 909 375 60 0 0 chr17 42476263 42476313 -52796338 + (TTG)n Simple_repeat Simple_repeat 2 51 0 6 909 225 304 27 55 chr17 42476313 42476386 -52796265 - B1F1 SINE Alu -11 138 68 6 909 1307 290 55 8 chr17 42476547 42476926 -52795725 - MTD LTR MaLR -9 410 14 6 909 33 43 0 0 chr17 42478228 42478275 -52794376 + AT_rich Low_complexity Low_complexity 1 47 0 6 909 23 33 0 0 chr17 42479342 42479372 -52793279 + AT_rich Low_complexity Low_complexity 1 30 0 6 909 1484 247 67 54 chr17 42479562 42479792 -52792859 - MTD LTR MaLR -8 411 161 6 909 426 20 0 0 chr17 42479792 42479843 -52792808 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 909 1484 247 67 54 chr17 42479843 42480018 -52792633 - MTD LTR MaLR -259 160 1 6 909 328 386 118 9 chr17 42480960 42481289 -52791362 - L4 LINE RTE -378 1651 1287 6 909 1037 291 70 6 chr17 42481292 42481648 -52791003 - MTEa LTR MaLR 0 379 1 6 909 1345 6 0 0 chr17 42481648 42481804 -52790847 + L1Md_A LINE L1 6427 6582 0 6 909 423 262 380 21 chr17 42482075 42482309 -52790342 - MTD LTR MaLR 0 419 102 6 909 507 174 10 52 chr17 42482410 42482507 -52790144 + MTD LTR MaLR 1 93 -326 6 909 665 294 24 37 chr17 42482513 42482841 -52789810 + Lx8 LINE L1 5061 5384 -496 6 909 351 247 191 17 chr17 42482839 42483012 -52789639 + Lx9 LINE L1 7395 7597 -47 6 909 1435 226 94 17 chr17 42483016 42483487 -52789164 + Lx8 LINE L1 5377 5918 -1555 6 909 328 321 102 49 chr17 42483852 42484176 -52788475 - L1ME3B LINE L1 -181 6059 5719 6 909 693 329 8 21 chr17 42484231 42484467 -52788184 - MTD LTR MaLR -186 233 1 6 909 1104 299 10 44 chr17 42485049 42485343 -52787308 - B4 SINE B4 -2 290 7 6 909 1008 273 51 75 chr17 42486026 42486398 -52786253 - MTE2a LTR MaLR 0 379 17 6 909 989 287 82 63 chr17 42486675 42487183 -52785468 - MER31A LTR ERV1 0 485 1 6 909 263 318 82 27 chr17 42487221 42487331 -52785320 - MER5A DNA MER1_type -63 126 11 6 909 233 290 86 14 chr17 42487328 42487398 -52785253 - ID4 SINE ID 0 83 9 6 909 6832 25 10 0 chr17 42487457 42488294 -52784357 - L1Md_F2 LINE L1 -14 6568 5724 6 909 729 109 0 18 chr17 42488294 42488406 -52784245 + B1_Mus1 SINE Alu 39 148 0 6 909 2271 179 77 2 chr17 42489201 42489273 -52783378 - RLTR16 LTR ERVK 0 505 413 6 909 261 0 0 0 chr17 42489273 42489302 -52783349 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 909 2271 179 77 2 chr17 42489302 42489699 -52782952 - RLTR16 LTR ERVK -93 412 3 6 909 201 297 108 0 chr17 42491025 42491099 -52781552 + L2 LINE L2 2824 2905 -514 6 909 293 369 19 0 chr17 42492398 42492501 -52780150 + PB1D10 SINE Alu 2 106 -11 6 909 274 270 0 0 chr17 42492522 42492585 -52780066 + ID4_ SINE ID 5 67 -16 6 909 997 271 153 19 chr17 42492597 42493014 -52779637 - MER31A LTR ERV1 -4 481 9 6 909 1251 199 120 49 chr17 42493156 42493360 -52779291 - ORR1D1 LTR MaLR 0 374 164 6 909 423 87 0 0 chr17 42493360 42493429 -52779222 + (CAGA)n Simple_repeat Simple_repeat 2 70 0 6 909 1251 199 120 49 chr17 42493429 42493573 -52779078 - ORR1D1 LTR MaLR -211 163 1 6 909 451 308 25 63 chr17 42493575 42493814 -52778837 - MER31-int LTR ERV1 -448 4908 4679 6 909 279 289 94 94 chr17 42493951 42494100 -52778551 + B1F SINE Alu 1 149 0 6 909 236 271 47 12 chr17 42494103 42494189 -52778462 + GA-rich Low_complexity Low_complexity 3 91 0 6 909 498 244 37 6 chr17 42494265 42494426 -52778225 - MER31-int LTR ERV1 -1138 3798 3633 6 909 480 18 0 0 chr17 42494518 42494575 -52778076 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 909 237 262 49 0 chr17 42495035 42495096 -52777555 - tRNA-Ala-GCY_ tRNA tRNA -7 68 5 6 909 5201 46 4 80 chr17 42496307 42497043 -52775608 + L1_Mus1 LINE L1 5888 6567 0 6 909 574 229 20 85 chr17 42497185 42497211 -52775440 - B1F1 SINE Alu -5 144 124 6 909 1374 155 0 13 chr17 42497211 42497440 -52775211 + URR1A DNA MER1_type 1 226 0 6 909 574 229 20 85 chr17 42497440 42497566 -52775085 - B1F1 SINE Alu -26 123 2 6 909 630 99 0 0 chr17 42497567 42497658 -52774993 + (TAGA)n Simple_repeat Simple_repeat 2 92 0 7 909 182 37 0 36 chr17 42497664 42497676 -52774975 + (CA)n Simple_repeat Simple_repeat 2 13 0 7 909 192 77 0 0 chr17 42497676 42497702 -52774949 + (TATG)n Simple_repeat Simple_repeat 2 27 0 7 909 182 37 0 36 chr17 42497702 42497717 -52774934 + (CA)n Simple_repeat Simple_repeat 2 16 0 7 909 611 204 136 23 chr17 42498909 42499085 -52773566 - Lx5 LINE L1 0 7050 6855 7 909 4523 77 5 3 chr17 42500731 42501335 -52771316 + L1_Mus3 LINE L1 6031 6635 -3 1 909 201 219 0 0 chr17 42503070 42503111 -52769540 + L2a LINE L2 3113 3153 -273 2 909 558 98 21 21 chr17 42503178 42503325 -52769326 + (TAGA)n Simple_repeat Simple_repeat 1 147 0 3 909 285 248 19 19 chr17 42503601 42503708 -52768943 - Lx9 LINE L1 -6 7638 7532 4 909 386 39 19 0 chr17 42503719 42503771 -52768880 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 909 3312 273 31 32 chr17 42503794 42504792 -52767859 - Lx9 LINE L1 -127 7517 6521 4 909 1198 217 117 88 chr17 42506830 42507214 -52765437 - MTD LTR MaLR -12 407 13 6 909 228 65 0 0 chr17 42507571 42507602 -52765049 - U3 snRNA snRNA -185 32 2 7 909 21 0 0 0 chr17 42509490 42509511 -52763140 + AT_rich Low_complexity Low_complexity 1 21 0 8 909 229 353 70 29 chr17 42509892 42510064 -52762587 - L2b LINE L2 -252 3123 2945 9 909 1108 199 14 5 chr17 42511909 42512116 -52760535 - B3 SINE B2 -7 209 1 1 909 22 0 0 0 chr17 42512122 42512144 -52760507 + AT_rich Low_complexity Low_complexity 1 22 0 1 909 200 163 23 23 chr17 42515262 42515306 -52757345 + (TATG)n Simple_repeat Simple_repeat 4 47 0 1 909 21 0 0 0 chr17 42515741 42515762 -52756889 + AT_rich Low_complexity Low_complexity 1 21 0 1 909 251 98 0 38 chr17 42516721 42516774 -52755877 + (CAGAGA)n Simple_repeat Simple_repeat 4 54 0 1 909 1633 223 68 8 chr17 42517044 42517428 -52755223 - MTD LTR MaLR 0 419 13 1 909 279 54 0 0 chr17 42517780 42517817 -52754834 + (T)n Simple_repeat Simple_repeat 1 37 0 1 909 810 332 116 48 chr17 42518326 42519365 -52753286 - L2 LINE L2 -410 3009 1901 1 909 459 356 85 20 chr17 42519407 42519748 -52752903 - L2 LINE L2 -1664 1755 1393 1 909 510 226 91 52 chr17 42519905 42520059 -52752592 + RMER30 DNA MER1_type 13 172 -30 1 909 558 393 38 59 chr17 42520091 42520469 -52752182 - MLT1H1 LTR MaLR -222 373 14 1 909 225 344 119 134 chr17 42520589 42520762 -52751889 - L2 LINE L2 -2713 706 552 1 909 4415 38 11 6 chr17 42520762 42521298 -52751353 + L1Md_F3 LINE L1 6045 6583 -1 2 909 225 344 119 134 chr17 42521298 42521543 -52751108 - L2 LINE L2 -2868 551 294 1 909 272 312 0 13 chr17 42521683 42521761 -52750890 + CT-rich Low_complexity Low_complexity 3 79 0 2 909 314 281 121 36 chr17 42521767 42521907 -52750744 - HAL1-3A_ME LINE L1 -423 2435 2284 2 909 232 373 146 14 chr17 42521926 42522201 -52750450 + L2a LINE L2 3111 3421 -5 2 909 307 305 115 45 chr17 42522217 42522461 -52750190 + MER112 DNA MER1_type 1 261 0 2 909 244 333 53 59 chr17 42522689 42522858 -52749793 - RLTR25B LTR ERVK 0 1028 861 2 909 226 177 47 31 chr17 42522813 42522877 -52749774 - RMER21B LTR ERV1 -223 619 555 2 909 21 0 0 0 chr17 42522939 42522960 -52749691 + AT_rich Low_complexity Low_complexity 1 21 0 2 909 413 336 76 49 chr17 42523629 42523933 -52748718 - RLTR25B LTR ERVK -716 312 1 2 909 929 258 43 132 chr17 42524125 42524541 -52748110 - MTE2a LTR MaLR 0 379 1 2 909 1153 185 71 0 chr17 42524731 42524942 -52747709 - URR1A DNA MER1_type 0 226 1 2 909 504 0 0 0 chr17 42525829 42525885 -52746766 + (TC)n Simple_repeat Simple_repeat 1 56 0 3 909 186 250 0 0 chr17 42525885 42525989 -52746662 + (TG)n Simple_repeat Simple_repeat 2 105 0 3 909 371 368 11 71 chr17 42526118 42526302 -52746349 - B4A SINE B4 -118 174 2 3 909 219 25 0 70 chr17 42526423 42526466 -52746185 + (CCCCCA)n Simple_repeat Simple_repeat 3 42 0 3 909 1161 284 188 32 chr17 42527300 42528043 -52744608 - Lx9 LINE L1 -19 7625 6767 3 909 302 280 11 21 chr17 42528623 42528718 -52743933 + GA-rich Low_complexity Low_complexity 4 97 0 3 909 282 29 0 0 chr17 42528720 42528755 -52743896 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 909 2145 156 70 150 chr17 42530885 42531286 -52741365 - RLTR28 LTR ERVL 0 524 106 3 909 1071 66 7 0 chr17 42531286 42531422 -52741229 + B1_Mus1 SINE Alu 1 137 -11 3 909 207 0 0 0 chr17 42531422 42531445 -52741206 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 909 1073 101 0 0 chr17 42531454 42531593 -52741058 + B1_Mus1 SINE Alu 1 139 -9 4 909 253 0 54 0 chr17 42531593 42531630 -52741021 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 909 2145 156 70 150 chr17 42531630 42531783 -52740868 - RLTR28 LTR ERVL -419 105 5 3 909 21 0 0 0 chr17 42532163 42532184 -52740467 + AT_rich Low_complexity Low_complexity 1 21 0 4 909 799 154 176 0 chr17 42532729 42532911 -52739740 - Lx9 LINE L1 -7 7637 7424 4 909 1322 67 56 0 chr17 42532944 42533123 -52739528 - B2_Mm2 SINE B2 -6 189 1 4 909 2769 214 31 11 chr17 42533674 42534223 -52738428 - RLTR20B1 LTR ERVK -3 560 1 4 909 2871 293 62 36 chr17 42534438 42535622 -52737029 - Lx9 LINE L1 -30 7614 6400 4 909 215 163 0 20 chr17 42535643 42535693 -52736958 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 909 672 262 48 19 chr17 42536776 42536986 -52735665 + B3 SINE B2 1 216 0 4 909 582 308 99 0 chr17 42537752 42537934 -52734717 + B4 SINE B4 2 201 -91 4 909 936 244 90 334 chr17 42537981 42538038 -52734613 - RMER10A LTR ERVL -137 261 185 5 909 513 0 0 0 chr17 42538038 42538095 -52734556 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 909 936 174 70 16 chr17 42538095 42538274 -52734377 - RMER10A LTR ERVL -240 202 12 5 909 1204 230 124 82 chr17 42538289 42538839 -52733812 - RMER17C-int LTR ERVK -59 3179 2607 5 909 491 211 0 10 chr17 42538971 42539067 -52733584 + LSU-rRNA_Hsa rRNA rRNA 4202 4296 -739 5 909 575 199 138 122 chr17 42539067 42539437 -52733214 - RLTR19-int LTR ERVK -2406 3731 3394 5 909 563 0 15 0 chr17 42539463 42539530 -52733121 + (GA)n Simple_repeat Simple_repeat 2 69 0 5 909 1155 191 5 5 chr17 42539545 42539755 -52732896 - RMER10A LTR ERVL -231 211 2 5 909 591 53 0 0 chr17 42540626 42540701 -52731950 + (GGAA)n Simple_repeat Simple_repeat 2 76 0 5 909 245 254 30 0 chr17 42540969 42541055 -52731596 + (CATATA)n Simple_repeat Simple_repeat 1 88 0 5 909 393 122 0 0 chr17 42541628 42541702 -52730949 + (TG)n Simple_repeat Simple_repeat 2 75 0 5 909 217 109 36 0 chr17 42543048 42543103 -52729548 + (TA)n Simple_repeat Simple_repeat 1 57 0 6 909 985 305 55 15 chr17 42543127 42543470 -52729181 - Lx8 LINE L1 -64 7409 7053 6 909 288 91 0 0 chr17 42544832 42544876 -52727775 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 909 37 0 0 0 chr17 42545219 42545256 -52727395 + AT_rich Low_complexity Low_complexity 1 37 0 6 909 261 43 42 21 chr17 42545751 42545799 -52726852 + (TGGA)n Simple_repeat Simple_repeat 1 49 0 6 909 561 279 85 0 chr17 42546774 42546939 -52725712 + B3A SINE B2 2 180 -18 6 909 237 83 0 0 chr17 42548793 42548829 -52723822 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 6 909 236 341 47 0 chr17 42548987 42549072 -52723579 - B1F SINE Alu 0 149 61 6 909 1235 27 7 0 chr17 42549634 42549780 -52722871 + B1_Mus1 SINE Alu 2 148 0 6 909 422 292 26 26 chr17 42549807 42549923 -52722728 + B3A SINE B2 6 121 -77 6 909 809 190 61 172 chr17 42549941 42550195 -52722456 - MTD LTR MaLR -30 389 200 7 909 723 264 88 0 chr17 42550195 42550388 -52722263 - B3 SINE B2 -6 210 1 7 909 809 177 71 177 chr17 42550388 42550464 -52722187 - MTD LTR MaLR -220 199 138 7 909 570 203 23 15 chr17 42550694 42550824 -52721827 - MTD LTR MaLR -288 131 1 7 909 25 31 0 0 chr17 42550895 42550927 -52721724 + AT_rich Low_complexity Low_complexity 1 32 0 7 909 714 217 14 0 chr17 42550935 42551078 -52721573 + B1_Mus1 SINE Alu 1 145 -3 7 909 198 0 0 0 chr17 42551085 42551107 -52721544 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 7 909 27 62 0 0 chr17 42551107 42551155 -52721496 + AT_rich Low_complexity Low_complexity 1 48 0 7 909 25 0 0 0 chr17 42551422 42551447 -52721204 + AT_rich Low_complexity Low_complexity 1 25 0 7 909 948 301 84 54 chr17 42552204 42552847 -52719804 - L1MB1 LINE L1 -24 6144 5483 7 909 351 288 141 23 chr17 42552883 42553182 -52719469 - L1MEc LINE L1 -4214 2186 1853 7 909 1350 235 114 29 chr17 42553244 42553630 -52719021 - MTD LTR MaLR 0 419 1 7 909 472 321 118 23 chr17 42553685 42554033 -52718618 - L1MEc LINE L1 -4697 1718 1338 7 909 330 327 82 27 chr17 42554139 42554249 -52718402 - PB1D10 SINE Alu 0 117 2 8 909 247 197 91 0 chr17 42554257 42554323 -52718328 - L1MEc LINE L1 -5527 873 802 7 909 247 209 0 0 chr17 42554428 42554471 -52718180 - RMER30 DNA MER1_type -27 175 133 8 909 614 325 105 58 chr17 42554582 42555098 -52717553 - L1MEc LINE L1 -5825 575 36 7 909 399 346 97 37 chr17 42555474 42555718 -52716933 - MLT1G3 LTR MaLR -138 441 164 8 909 359 167 11 0 chr17 42555733 42555823 -52716828 + (TTTG)n Simple_repeat Simple_repeat 1 91 0 8 909 737 168 35 28 chr17 42555850 42555991 -52716660 - B1_Mur3 SINE Alu -7 142 1 8 909 1827 160 22 3 chr17 42556258 42556571 -52716080 + ORR1A2 LTR MaLR 1 319 -8 8 909 444 261 49 35 chr17 42557893 42558119 -52714532 - Lx9 LINE L1 0 7644 7416 8 909 203 286 18 18 chr17 42558120 42558177 -52714474 - L2a LINE L2 -25 3401 3345 8 909 784 305 61 14 chr17 42558379 42558592 -52714059 + B4 SINE B4 3 225 -67 8 909 399 171 0 0 chr17 42558592 42558668 -52713983 + GA-rich Low_complexity Low_complexity 2 77 0 8 909 1289 13 13 0 chr17 42558668 42558822 -52713829 + (GGGAA)n Simple_repeat Simple_repeat 1 156 0 9 909 1481 176 56 4 chr17 42558823 42559091 -52713560 + ORR1A2 LTR MaLR 46 327 0 9 909 267 344 42 0 chr17 42560909 42561005 -52711646 + L2 LINE L2 1931 2030 -1389 9 909 273 274 46 28 chr17 42561024 42561133 -52711518 + L2 LINE L2 2111 2221 -1198 9 909 23 0 0 0 chr17 42563184 42563207 -52709444 + AT_rich Low_complexity Low_complexity 1 23 0 9 909 816 224 16 54 chr17 42563335 42563548 -52709103 + B3A SINE B2 1 205 -11 9 909 2009 143 0 58 chr17 42563590 42563938 -52708713 - ORR1A4 LTR MaLR -1 328 1 9 909 537 115 0 0 chr17 42564542 42564629 -52708022 + (TG)n Simple_repeat Simple_repeat 1 87 0 9 909 480 263 266 40 chr17 42564732 42564987 -52707664 + Lx8 LINE L1 7152 7463 -10 9 909 378 338 40 35 chr17 42565032 42565234 -52707417 - MARNA DNA Mariner -85 501 299 9 909 772 269 125 41 chr17 42565498 42566035 -52706616 - L1MA6 LINE L1 0 6300 5710 9 909 242 269 164 9 chr17 42566157 42566273 -52706378 - MIR SINE MIR -48 214 81 1 909 300 342 66 8 chr17 42566698 42566819 -52705832 - LTR33B LTR ERVL -322 181 54 1 909 315 313 91 0 chr17 42567850 42567949 -52704702 - B3A SINE B2 -89 109 2 1 909 186 346 0 0 chr17 42567979 42568031 -52704620 + L2c LINE L2 3026 3077 -310 1 909 182 297 0 72 chr17 42568270 42568339 -52704312 + MIRm SINE MIR 213 276 0 1 909 462 272 136 0 chr17 42568640 42568765 -52703886 - B1_Mur1 SINE Alu -7 142 1 1 909 271 280 119 10 chr17 42568797 42568898 -52703753 + PB1D7 SINE Alu 1 112 -8 1 909 234 62 0 0 chr17 42568899 42568931 -52703720 + (TTAA)n Simple_repeat Simple_repeat 1 32 0 1 909 413 360 85 51 chr17 42569032 42569710 -52702941 + L2a LINE L2 2724 3426 0 1 909 450 0 0 0 chr17 42570752 42570802 -52701849 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 909 204 374 103 54 chr17 42571637 42571821 -52700830 + L4 LINE RTE 1157 1349 -680 1 909 495 309 107 0 chr17 42571955 42572133 -52700518 - MIR SINE MIR -46 216 20 1 909 410 214 67 22 chr17 42572210 42572344 -52700307 - Lx5 LINE L1 -1 7049 6910 1 909 378 0 0 0 chr17 42572712 42572754 -52699897 + (T)n Simple_repeat Simple_repeat 1 42 0 1 909 29559 108 15 3 chr17 42573877 42579904 -52692747 - L1_Mus1 LINE L1 -1 6566 462 1 909 465 262 105 12 chr17 42579928 42580090 -52692561 + B4A SINE B4 104 280 -12 1 909 425 19 19 0 chr17 42580150 42580204 -52692447 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 909 291 85 0 0 chr17 42580452 42580499 -52692152 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 1 909 990 125 71 0 chr17 42580756 42580924 -52691727 - L1_Mus4 LINE L1 -2 6634 6455 1 909 369 0 0 0 chr17 42582138 42582179 -52690472 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 909 2332 96 29 9 chr17 42583228 42583574 -52689077 - Lx3_Mus LINE L1 -5 7004 6652 1 909 1507 70 25 25 chr17 42583574 42583810 -52688841 + L1_Mur1 LINE L1 5068 5303 -583 1 909 310 108 15 15 chr17 42584173 42584239 -52688412 + (CAAAAA)n Simple_repeat Simple_repeat 2 67 0 1 909 405 0 0 0 chr17 42584756 42584801 -52687850 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 909 21 36 0 0 chr17 42584960 42584988 -52687663 + AT_rich Low_complexity Low_complexity 1 28 0 1 909 483 246 52 7 chr17 42585757 42585892 -52686759 - B1F SINE Alu 0 149 9 1 909 195 69 0 0 chr17 42585994 42586023 -52686628 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 909 191 239 0 15 chr17 42587047 42587115 -52685536 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 909 186 246 0 0 chr17 42588040 42588101 -52684550 + GA-rich Low_complexity Low_complexity 2 62 0 1 909 624 158 0 0 chr17 42588117 42588231 -52684420 + (TAGA)n Simple_repeat Simple_repeat 4 117 0 1 909 249 139 0 0 chr17 42588234 42588277 -52684374 + (TGGG)n Simple_repeat Simple_repeat 2 44 0 1 909 263 361 24 32 chr17 42588508 42588634 -52684017 - MIRb SINE MIR -8 260 136 1 909 22 70 0 0 chr17 42588674 42588717 -52683934 + AT_rich Low_complexity Low_complexity 1 43 0 1 909 262 400 9 37 chr17 42589255 42589364 -52683287 + MER91A DNA Tip100 17 122 -74 1 909 231 36 0 0 chr17 42589636 42589664 -52682987 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1 909 235 272 49 73 chr17 42590135 42590258 -52682393 - MLT1A1 LTR MaLR -281 127 8 1 909 1221 34 7 0 chr17 42590261 42590407 -52682244 + B1_Mus1 SINE Alu 1 147 -1 1 909 2579 146 147 43 chr17 42591444 42591761 -52680890 + RLTR31A_Mm LTR ERVK 1 323 -261 1 909 1127 67 0 0 chr17 42591761 42591896 -52680755 + B1_Mm SINE Alu 2 136 -11 1 909 621 0 0 0 chr17 42591898 42591967 -52680684 + (GA)n Simple_repeat Simple_repeat 1 69 0 1 909 2579 146 147 43 chr17 42591967 42592175 -52680476 + RLTR31A_Mm LTR ERVK 324 584 0 1 909 240 170 0 0 chr17 42592274 42592327 -52680324 + CT-rich Low_complexity Low_complexity 2 54 0 1 909 1161 83 0 0 chr17 42592328 42592508 -52680143 + (TC)n Simple_repeat Simple_repeat 1 180 0 1 909 337 331 30 67 chr17 42592508 42592806 -52679845 - B4A SINE B4 -1 291 5 1 909 633 161 102 0 chr17 42592807 42592925 -52679726 + MTC LTR MaLR 1 130 -291 1 909 847 213 29 6 chr17 42592929 42593099 -52679552 + MTC LTR MaLR 240 413 -8 1 909 4889 206 89 16 chr17 42593102 42594274 -52678377 + MTC-int LTR MaLR 2 1258 0 1 909 1763 161 52 146 chr17 42594274 42594739 -52677912 + MTC LTR MaLR 1 421 0 1 909 731 85 246 0 chr17 42594777 42594895 -52677756 - B1_Mm SINE Alu 0 147 1 1 909 203 349 90 70 chr17 42594936 42595235 -52677416 + L2 LINE L2 2319 2623 -796 1 909 431 335 18 35 chr17 42595408 42595578 -52677073 + ORR1E LTR MaLR 25 191 -168 1 909 759 78 0 0 chr17 42595594 42595697 -52676954 + (TC)n Simple_repeat Simple_repeat 1 103 0 1 909 326 309 50 20 chr17 42595796 42595895 -52676756 + ORR1E LTR MaLR 276 377 -2 1 909 2037 283 93 61 chr17 42595902 42596308 -52676343 + ORR1E-int LTR MaLR 10 456 -1124 1 909 207 0 0 0 chr17 42596308 42596331 -52676320 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1 909 2037 283 93 61 chr17 42596331 42596749 -52675902 + ORR1E-int LTR MaLR 457 861 -719 1 909 301 200 31 31 chr17 42597206 42597304 -52675347 + (TA)n Simple_repeat Simple_repeat 2 99 0 1 909 315 314 12 0 chr17 42597521 42597607 -52675044 - MLT1J LTR MaLR -90 422 336 1 910 1126 210 76 13 chr17 42598432 42598727 -52673924 - MTD LTR MaLR 0 419 43 1 910 202 194 0 0 chr17 42599145 42599181 -52673470 + MIR SINE MIR 84 119 -143 1 910 612 307 85 6 chr17 42599933 42600110 -52672541 + ORR1E LTR MaLR 1 191 -168 1 910 2227 149 43 8 chr17 42600233 42600606 -52672045 + ORR1B1 LTR MaLR 1 386 -8 1 910 568 296 53 0 chr17 42600611 42600780 -52671871 + B3A SINE B2 5 182 -16 1 910 1461 237 28 12 chr17 42601046 42601366 -52671285 - MTD LTR MaLR 0 419 95 1 910 1665 168 58 83 chr17 42602363 42602726 -52669925 - ORR1B1 LTR MaLR 0 394 41 1 910 610 308 104 19 chr17 42602852 42603120 -52669531 - B4A SINE B4 0 292 2 1 910 270 299 64 92 chr17 42603153 42603361 -52669290 - MLT2B2 LTR ERVL -10 545 365 1 910 341 247 249 16 chr17 42603376 42603561 -52669090 - MLT2B2 LTR ERVL -287 228 1 1 910 4807 107 52 9 chr17 42603825 42604601 -52668050 - RMER17D2 LTR ERVK 0 809 1 1 910 242 287 0 54 chr17 42604964 42605093 -52667558 + Lx8 LINE L1 7352 7473 0 1 910 560 293 209 7 chr17 42605103 42605375 -52667276 + Lx9 LINE L1 7105 7431 -213 1 910 576 42 0 0 chr17 42605422 42605493 -52667158 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 910 336 24 0 0 chr17 42606222 42606263 -52666388 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 910 769 20 20 0 chr17 42606922 42607024 -52665627 + B1_Mus2 SINE Alu 44 147 0 1 910 423 45 54 22 chr17 42607026 42607118 -52665533 + (CAAAAA)n Simple_repeat Simple_repeat 2 96 0 1 910 1016 238 5 27 chr17 42607638 42607858 -52664793 + B3 SINE B2 2 216 0 1 910 6940 56 2 2 chr17 42607862 42608786 -52663865 + L1Md_F2 LINE L1 4663 5586 -297 1 910 8029 46 2 3 chr17 42608786 42609782 -52662869 + L1Md_F2 LINE L1 5587 6581 -1 1 910 248 0 0 30 chr17 42609802 42609835 -52662816 + (TAA)n Simple_repeat Simple_repeat 2 33 0 1 910 222 303 39 29 chr17 42609879 42609981 -52662670 - MIR SINE MIR -70 192 90 1 910 5553 101 56 22 chr17 42610908 42611752 -52660899 - Lx LINE L1 0 6654 5783 1 910 723 103 86 46 chr17 42611759 42611911 -52660740 - L1_Mus4 LINE L1 0 6636 6479 1 910 516 56 0 0 chr17 42611912 42611983 -52660668 - Lx LINE L1 -863 5791 5721 1 910 3004 143 4 2 chr17 42611981 42612487 -52660164 - Lx LINE L1 -361 5522 5016 1 910 1024 204 19 33 chr17 42612487 42612700 -52659951 - MTB_Mm LTR MaLR -197 210 1 1 910 342 250 0 0 chr17 42612761 42612829 -52659822 + ID4 SINE ID 14 81 -2 1 910 333 125 0 0 chr17 42613469 42613525 -52659126 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 910 616 279 6 19 chr17 42613569 42613726 -52658925 - B3A SINE B2 -42 156 2 1 910 280 312 0 0 chr17 42614265 42614342 -52658309 + (TCG)n Simple_repeat Simple_repeat 3 79 0 1 910 400 288 21 144 chr17 42614342 42614452 -52658199 - RSINE1 SINE B4 0 165 59 1 910 4342 10 0 2 chr17 42614452 42614935 -52657716 - LTRIS_Mm LTR ERV1 0 482 1 1 910 400 288 21 144 chr17 42614935 42615011 -52657640 - RSINE1 SINE B4 -107 58 2 1 910 944 206 23 41 chr17 42615542 42615760 -52656891 - B3 SINE B2 0 216 3 1 910 394 248 60 48 chr17 42615781 42616031 -52656620 + L1M4 LINE L1 3633 3885 -2261 1 910 228 130 0 0 chr17 42616260 42616306 -52656345 + (TC)n Simple_repeat Simple_repeat 1 46 0 1 910 216 158 0 0 chr17 42616403 42616441 -52656210 + GA-rich Low_complexity Low_complexity 2 39 0 1 910 1411 215 18 12 chr17 42616441 42616771 -52655880 + RMER1C Other Other 1004 1335 -7 1 910 650 206 106 25 chr17 42616814 42617013 -52655638 - Lx9 LINE L1 -7 7637 7423 1 910 748 268 129 13 chr17 42617054 42617356 -52655295 - RCHARR1 DNA MER1_type -494 480 144 1 910 234 296 177 28 chr17 42617422 42617603 -52655048 - MIRb SINE MIR -38 230 23 1 910 1031 135 11 0 chr17 42617877 42618055 -52654596 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 910 5640 108 1 1 chr17 42618058 42618903 -52653748 - L1_Mus1 LINE L1 -162 5721 4877 1 910 6067 61 47 10 chr17 42618903 42619696 -52652955 + L1_Mus1 LINE L1 5740 6561 -6 1 910 663 13 0 0 chr17 42619696 42619772 -52652879 + (GGAA)n Simple_repeat Simple_repeat 4 79 0 1 910 26 30 0 0 chr17 42620698 42620731 -52651920 + AT_rich Low_complexity Low_complexity 1 33 0 1 910 793 338 128 16 chr17 42620756 42621270 -52651381 - MER90a LTR ERV1 0 614 43 1 910 3196 29 0 0 chr17 42621376 42621750 -52650901 - L1Md_T LINE L1 0 6582 6209 1 910 315 283 135 28 chr17 42621985 42622163 -52650488 - RMER2 LTR ERV1 0 567 371 1 910 1064 171 79 75 chr17 42622174 42622439 -52650212 - RMER2 LTR ERV1 -300 267 2 1 910 1227 340 14 4 chr17 42622889 42623383 -52649268 - MuRRS4-int LTR ERV1 -1040 4023 3525 1 910 277 337 21 31 chr17 42623645 42623838 -52648813 - RLTR6-int LTR ERV1 -3231 4547 4357 1 910 270 314 20 68 chr17 42624347 42624494 -52648157 - RLTR6-int LTR ERV1 -4298 3303 3164 1 910 276 336 32 8 chr17 42625169 42625292 -52647359 - RLTR6-int LTR ERV1 -6085 1693 1568 1 910 3138 209 38 92 chr17 42625292 42626152 -52646499 + RMER1B Other Other 43 867 -199 1 910 2576 95 22 3 chr17 42626152 42626523 -52646128 + L1_Mus4 LINE L1 6257 6634 -2 1 910 3138 209 38 92 chr17 42626523 42626589 -52646062 + RMER1B Other Other 868 919 -147 1 910 411 246 53 66 chr17 42626674 42626777 -52645874 - RMER4B LTR ERVK 0 585 485 2 910 1899 234 94 49 chr17 42626777 42627308 -52645343 - RMER2 LTR ERV1 0 567 13 2 910 849 155 0 0 chr17 42627310 42627458 -52645193 + GA-rich Low_complexity Low_complexity 2 149 0 2 910 1273 173 19 23 chr17 42627501 42627762 -52644889 - RMER4B LTR ERVK -309 276 17 2 910 362 211 0 43 chr17 42627767 42627861 -52644790 + RMER1A Other Other 936 1025 -5 1 910 8156 12 1 0 chr17 42627898 42628885 -52643766 - L1_Mm LINE L1 -1636 4247 3260 2 910 1754 42 0 5 chr17 42628885 42629103 -52643548 + L1Md_T LINE L1 6365 6581 -1 2 910 21 36 0 0 chr17 42629277 42629305 -52643346 + AT_rich Low_complexity Low_complexity 1 28 0 2 910 222 37 0 0 chr17 42629322 42629349 -52643302 + (T)n Simple_repeat Simple_repeat 1 27 0 2 910 1470 239 63 40 chr17 42629549 42629945 -52642706 - MTD LTR MaLR -2 417 13 2 910 25 0 0 0 chr17 42630280 42630305 -52642346 + AT_rich Low_complexity Low_complexity 1 25 0 2 910 586 254 146 0 chr17 42630307 42630492 -52642159 + B3 SINE B2 4 215 -1 2 910 1244 297 29 11 chr17 42630705 42631052 -52641599 - ORR1E LTR MaLR -6 353 1 2 910 610 294 74 138 chr17 42631166 42631529 -52641122 - RLTR23 LTR ERV1 0 430 91 2 910 531 167 20 20 chr17 42631574 42631672 -52640979 - RLTR23 LTR ERV1 -330 100 3 2 910 1139 243 56 106 chr17 42632149 42632526 -52640125 - MTE2a LTR MaLR 0 379 22 2 910 537 58 0 0 chr17 42632530 42632599 -52640052 + (TC)n Simple_repeat Simple_repeat 2 70 0 2 910 342 123 0 0 chr17 42632599 42632655 -52639996 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 910 200 231 19 0 chr17 42632663 42632715 -52639936 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 2 910 29 0 0 0 chr17 42632864 42632893 -52639758 + AT_rich Low_complexity Low_complexity 1 29 0 2 910 498 355 79 0 chr17 42633501 42633704 -52638947 + MER20 DNA MER1_type 1 219 0 2 910 601 303 105 20 chr17 42633785 42634129 -52638522 - Lx8 LINE L1 -29 7444 7072 2 910 262 62 62 0 chr17 42634242 42634290 -52638361 + (CATA)n Simple_repeat Simple_repeat 3 53 0 2 910 378 0 0 0 chr17 42634290 42634332 -52638319 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 910 538 274 109 5 chr17 42634855 42635057 -52637594 + ID_B1 SINE B4 2 224 0 2 910 249 108 0 0 chr17 42636529 42636566 -52636085 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2 910 617 261 45 13 chr17 42637410 42637565 -52635086 + B3 SINE B2 1 160 -56 2 910 751 309 62 36 chr17 42637616 42637732 -52634919 + B4A SINE B4 11 139 -153 2 910 6250 59 16 22 chr17 42637732 42638559 -52634092 + RLTR13B2 LTR ERVK 1 822 0 2 910 751 309 62 36 chr17 42638559 42638717 -52633934 + B4A SINE B4 140 292 0 2 910 186 43 0 0 chr17 42642268 42642291 -52630360 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 2 910 231 36 0 0 chr17 42642325 42642353 -52630298 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2 910 180 0 0 0 chr17 42643236 42643256 -52629395 + (A)n Simple_repeat Simple_repeat 1 20 0 2 910 252 0 0 0 chr17 42645348 42645376 -52627275 + (T)n Simple_repeat Simple_repeat 1 28 0 2 910 29 70 0 0 chr17 42648225 42648282 -52624369 + AT_rich Low_complexity Low_complexity 1 57 0 2 910 351 0 0 0 chr17 42649106 42649145 -52623506 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 910 597 154 12 5 chr17 42649168 42649275 -52623376 - PB1D9 SINE Alu 0 120 13 2 910 180 27 81 0 chr17 42649301 42649338 -52623313 + (TTG)n Simple_repeat Simple_repeat 2 41 0 2 910 1208 35 14 0 chr17 42649351 42649496 -52623155 - B1_Mm SINE Alu 0 147 1 2 910 230 295 0 143 chr17 42649587 42649678 -52622973 - PB1D10 SINE Alu -27 90 13 2 910 210 333 0 119 chr17 42649678 42649692 -52622959 - ID_B1 SINE B4 -49 171 80 2 910 593 323 0 55 chr17 42651929 42652093 -52620558 - RSINE1 SINE B4 -8 157 3 2 910 352 331 72 24 chr17 42652467 42652634 -52620017 + MER5B DNA MER1_type 4 178 0 2 910 366 333 0 31 chr17 42652726 42652822 -52619829 + ID_B1 SINE B4 81 173 -51 2 910 358 284 69 60 chr17 42652727 42652823 -52619828 + PB1D10 SINE Alu 1 92 -25 2 910 312 48 0 0 chr17 42652823 42652865 -52619786 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 2 910 358 284 69 60 chr17 42652865 42652884 -52619767 + PB1D10 SINE Alu 93 117 0 2 910 260 254 28 0 chr17 42653503 42653574 -52619077 - MER53 DNA hAT -120 73 1 2 910 233 182 0 0 chr17 42653852 42653896 -52618755 - MLT2B5 LTR ERVL -673 44 1 2 910 243 0 0 0 chr17 42656578 42656605 -52616046 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 2 910 24 0 0 0 chr17 42658264 42658288 -52614363 + AT_rich Low_complexity Low_complexity 1 24 0 2 910 1116 269 44 14 chr17 42658814 42659180 -52613471 - MTEb LTR MaLR 0 379 3 2 910 879 223 117 0 chr17 42659453 42659650 -52613001 - MTD LTR MaLR 0 419 200 2 910 825 168 0 0 chr17 42659654 42659809 -52612842 + CT-rich Low_complexity Low_complexity 2 156 0 2 910 449 212 88 54 chr17 42659850 42660054 -52612597 - Lx2B LINE L1 -10 6990 6780 2 910 4180 183 42 10 chr17 42660042 42660976 -52611675 + Lx2B LINE L1 5805 6768 -232 2 910 999 213 15 0 chr17 42660976 42661178 -52611473 - MTD LTR MaLR -211 208 4 2 910 224 316 228 0 chr17 42661536 42661615 -52611036 - PB1D10 SINE Alu -20 97 1 2 910 610 319 115 11 chr17 42661942 42662202 -52610449 + B4A SINE B4 1 287 -5 2 910 654 13 0 0 chr17 42662202 42662277 -52610374 + (GA)n Simple_repeat Simple_repeat 2 76 0 2 910 1275 165 9 9 chr17 42663524 42663744 -52608907 - URR1A DNA MER1_type -5 221 2 2 910 668 326 37 41 chr17 42664061 42664307 -52608344 - B4A SINE B4 -4 288 44 2 910 280 402 28 28 chr17 42664402 42664650 -52608001 - L3 LINE CR1 -248 4241 3994 2 910 22 0 0 0 chr17 42665534 42665556 -52607095 + AT_rich Low_complexity Low_complexity 1 22 0 2 910 1005 140 49 27 chr17 42665912 42666095 -52606556 - B2_Mm2 SINE B2 -8 187 1 2 910 246 284 24 12 chr17 42668608 42668690 -52603961 + MLT1H1 LTR MaLR 462 544 -11 2 910 1725 161 174 30 chr17 42668742 42669145 -52603506 + RMER6B LTR ERVK 1 461 0 2 910 368 354 0 109 chr17 42669312 42669496 -52603155 + RSINE1 SINE B4 2 165 0 2 910 1000 117 0 0 chr17 42669548 42669685 -52602966 + B1_Mus1 SINE Alu 2 138 -10 2 910 239 393 89 0 chr17 42670262 42670374 -52602277 + LTR81C LTR ERV1? 719 840 -313 2 910 822 206 0 0 chr17 42670600 42670741 -52601910 + B1_Mur2 SINE Alu 1 141 -8 2 910 1266 76 0 0 chr17 42670741 42670912 -52601739 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 2 910 441 0 0 0 chr17 42670942 42670991 -52601660 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 910 2885 164 111 13 chr17 42670991 42671307 -52601344 + RMER6D LTR ERVK 29 368 -352 2 910 414 0 0 0 chr17 42671307 42671353 -52601298 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 910 2885 164 111 13 chr17 42671353 42671585 -52601066 + RMER6D LTR ERVK 369 630 -90 2 910 2598 89 5 23 chr17 42671602 42671991 -52600660 + MT-int LTR MaLR 644 1025 -73 2 910 432 153 28 0 chr17 42671993 42672065 -52600586 + RMER6D LTR ERVK 636 709 -11 2 910 474 120 0 0 chr17 42672067 42672142 -52600509 + (CA)n Simple_repeat Simple_repeat 2 76 0 2 910 701 293 39 108 chr17 42672164 42672367 -52600284 - B3A SINE B2 -3 190 2 2 910 497 80 0 13 chr17 42672625 42672701 -52599950 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 2 910 210 233 0 0 chr17 42672712 42672772 -52599879 + CT-rich Low_complexity Low_complexity 1 60 0 2 910 6626 87 15 34 chr17 42672846 42674258 -52598393 + L1_Mus2 LINE L1 5161 6566 0 2 910 456 72 0 0 chr17 42674443 42674512 -52598139 + (TC)n Simple_repeat Simple_repeat 2 70 0 2 910 17767 156 14 3 chr17 42674654 42678753 -52593898 - Lx LINE L1 0 6654 2510 2 910 5675 211 72 58 chr17 42678758 42679038 -52593613 - Lx7 LINE L1 0 7696 7406 2 910 2438 58 3 3 chr17 42679038 42679350 -52593301 + L1_Mus1 LINE L1 6255 6566 -1 2 910 5675 211 72 58 chr17 42679350 42679839 -52592812 - Lx7 LINE L1 -291 7405 6931 2 910 1754 196 26 68 chr17 42679839 42680222 -52592429 - ORR1B2 LTR MaLR 0 367 1 2 910 5675 203 87 32 chr17 42680222 42681553 -52591098 - Lx7 LINE L1 -766 6930 5496 2 910 259 351 18 18 chr17 42681565 42681678 -52590973 - MIRb SINE MIR -43 225 113 2 910 25 31 0 0 chr17 42682689 42682721 -52589930 + AT_rich Low_complexity Low_complexity 1 32 0 2 910 885 308 77 62 chr17 42682947 42682994 -52589657 - MLT1A1 LTR MaLR 0 408 364 2 910 1404 44 0 0 chr17 42682994 42683174 -52589477 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 910 776 278 19 5 chr17 42683174 42683387 -52589264 - ID_B1 SINE B4 -6 218 3 2 910 885 308 77 62 chr17 42683387 42683740 -52588911 - MLT1A1 LTR MaLR -45 363 2 2 910 395 318 101 50 chr17 42684363 42684562 -52588089 + MLT1J LTR MaLR 1 209 -303 2 910 7394 40 4 1 chr17 42684562 42685494 -52587157 - L1Md_T LINE L1 -3 6579 5645 2 910 1171 36 0 0 chr17 42686240 42686378 -52586273 + B1_Mm SINE Alu 1 138 -9 2 910 387 0 0 0 chr17 42686378 42686421 -52586230 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2 910 329 319 42 17 chr17 42687030 42687148 -52585503 + RSINE1 SINE B4 13 133 -32 2 910 447 273 149 11 chr17 42687167 42687341 -52585310 + B3A SINE B2 1 198 0 2 910 567 288 31 10 chr17 42687399 42687592 -52585059 + B3A SINE B2 2 198 0 2 910 302 188 12 24 chr17 42687607 42687689 -52584962 + Lx9 LINE L1 7516 7596 -48 2 910 468 139 0 0 chr17 42687846 42687925 -52584726 + (TTG)n Simple_repeat Simple_repeat 2 80 0 2 910 788 170 0 6 chr17 42687953 42688113 -52584538 + CT-rich Low_complexity Low_complexity 1 159 0 2 910 2369 221 102 22 chr17 42688694 42689295 -52583356 - Lx5 LINE L1 -4 7456 6808 2 910 396 0 0 0 chr17 42689354 42689398 -52583253 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 910 3171 167 28 9 chr17 42689404 42690215 -52582436 - Lx5 LINE L1 -971 6079 5249 2 910 3238 255 13 8 chr17 42690216 42690974 -52581677 + Lx5 LINE L1 6155 6916 -134 2 910 28 0 0 0 chr17 42691035 42691063 -52581588 + AT_rich Low_complexity Low_complexity 1 28 0 2 910 2280 198 53 123 chr17 42691063 42691824 -52580827 + Lx7 LINE L1 6988 7694 -2 2 910 3531 25 0 0 chr17 42691830 42692236 -52580415 + L1Md_A LINE L1 6177 6582 0 2 910 189 107 0 0 chr17 42692316 42692344 -52580307 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 910 238 103 28 56 chr17 42692826 42692898 -52579753 + T-rich Low_complexity Low_complexity 2 71 0 3 910 305 182 207 0 chr17 42692923 42693044 -52579607 + Lx7 LINE L1 7394 7539 -157 3 910 2417 55 10 7 chr17 42693114 42693424 -52579227 + L1Md_F2 LINE L1 6270 6580 -2 3 910 21 36 0 0 chr17 42693736 42693764 -52578887 + AT_rich Low_complexity Low_complexity 1 28 0 3 910 270 206 0 0 chr17 42694964 42695027 -52577624 + (CATATA)n Simple_repeat Simple_repeat 5 67 0 3 910 9107 57 1 1 chr17 42695871 42697074 -52575577 + L1_Mm LINE L1 4482 5684 -199 3 910 2673 148 48 76 chr17 42697199 42697741 -52574910 + RLTR11A2 LTR ERVK 1 527 0 3 910 232 320 78 0 chr17 42698304 42698407 -52574244 - MIRb SINE MIR -62 206 96 3 910 188 231 112 25 chr17 42699369 42699449 -52573202 + MIRm SINE MIR 39 132 -144 3 910 596 261 22 0 chr17 42700872 42701006 -52571645 - RSINE1 SINE B4 -25 140 4 3 910 204 56 27 27 chr17 42701948 42701985 -52570666 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 3 910 415 315 45 23 chr17 42705188 42705321 -52567330 - MER58A DNA MER1_type -88 136 1 3 910 268 303 40 0 chr17 42706966 42707042 -52565609 - B1F SINE Alu -52 97 19 3 910 2563 59 88 25 chr17 42708912 42709275 -52563376 + L1Md_F2 LINE L1 6197 6582 0 3 910 26 0 0 0 chr17 42709804 42709830 -52562821 + AT_rich Low_complexity Low_complexity 1 26 0 3 910 339 85 0 0 chr17 42710219 42710266 -52562385 + (TTA)n Simple_repeat Simple_repeat 3 49 0 3 910 186 167 0 0 chr17 42712778 42712814 -52559837 + GA-rich Low_complexity Low_complexity 3 38 0 3 910 24 32 0 0 chr17 42713061 42713092 -52559559 + AT_rich Low_complexity Low_complexity 1 31 0 3 910 25 31 0 0 chr17 42716470 42716502 -52556149 + AT_rich Low_complexity Low_complexity 1 32 0 3 910 199 247 99 49 chr17 42718961 42719042 -52553609 - L2c LINE L2 -2 3385 3301 3 910 230 289 79 0 chr17 42719393 42719469 -52553182 + MLT1K LTR MaLR 155 236 -359 3 910 405 0 0 0 chr17 42719749 42719794 -52552857 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 910 401 291 118 19 chr17 42720076 42720220 -52552431 + B3A SINE B2 15 163 -32 3 910 726 128 0 0 chr17 42720220 42720369 -52552282 + (CA)n Simple_repeat Simple_repeat 1 149 0 3 910 244 301 84 67 chr17 42720369 42720402 -52552249 + B2_Mm2 SINE B2 164 195 0 3 910 195 42 0 0 chr17 42721436 42721460 -52551191 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 910 367 254 52 99 chr17 42722641 42722703 -52549948 + ID_B1 SINE B4 35 168 -56 3 910 434 215 28 18 chr17 42722703 42722812 -52549839 + B1F1 SINE Alu 1 110 -39 3 910 367 254 52 99 chr17 42722812 42722828 -52549823 + ID_B1 SINE B4 169 207 -17 3 910 3618 71 2 8 chr17 42722828 42723299 -52549352 - L1Md_F2 LINE L1 -12 6570 6103 3 910 367 252 42 78 chr17 42723299 42723320 -52549331 + ID_B1 SINE B4 208 224 0 3 910 190 273 0 18 chr17 42724089 42724145 -52548506 - MIR SINE MIR -64 144 90 3 910 253 263 29 39 chr17 42724664 42724767 -52547884 - L2a LINE L2 -9 3417 3316 3 910 3154 111 58 10 chr17 42724980 42725482 -52547169 + Lx LINE L1 6129 6654 0 3 910 369 0 0 0 chr17 42725887 42725928 -52546723 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 910 434 292 33 16 chr17 42726339 42726461 -52546190 + ID_B1 SINE B4 82 205 -19 3 910 618 82 0 0 chr17 42726468 42726553 -52546098 + (GGGA)n Simple_repeat Simple_repeat 4 88 0 3 910 3778 36 2 0 chr17 42728132 42728580 -52544071 + L1Md_F2 LINE L1 6134 6582 0 3 910 291 269 29 29 chr17 42728580 42728649 -52544002 + B4A SINE B4 222 290 -2 3 910 314 216 46 144 chr17 42728783 42728978 -52543673 + Lx9 LINE L1 7452 7627 -17 3 910 723 12 0 0 chr17 42729275 42729359 -52543292 + (TG)n Simple_repeat Simple_repeat 1 84 0 3 911 932 239 18 14 chr17 42731145 42731366 -52541285 - ID_B1 SINE B4 0 224 3 3 911 537 16 0 0 chr17 42731460 42731522 -52541129 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 911 898 204 20 68 chr17 42731797 42732049 -52540602 + L3 LINE CR1 4163 4402 -87 3 911 279 0 0 0 chr17 42733792 42733823 -52538828 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 911 2134 271 118 57 chr17 42733889 42734893 -52537758 + Lx8 LINE L1 6398 7462 -11 3 911 256 96 37 37 chr17 42735601 42735655 -52536996 + Lx6 LINE L1 7185 7238 -222 3 911 1234 216 23 12 chr17 42735693 42735951 -52536700 + Lx6 LINE L1 7185 7445 -15 3 911 472 328 31 21 chr17 42736209 42736402 -52536249 + ID_B1 SINE B4 10 204 -20 3 911 653 66 11 0 chr17 42736494 42736585 -52536066 + (TCTTG)n Simple_repeat Simple_repeat 5 96 0 3 911 198 0 0 0 chr17 42736603 42736625 -52536026 + (TG)n Simple_repeat Simple_repeat 1 22 0 3 911 303 28 0 0 chr17 42736625 42736660 -52535991 + (GA)n Simple_repeat Simple_repeat 1 36 0 3 911 238 0 143 0 chr17 42737077 42737119 -52535532 + (CATATA)n Simple_repeat Simple_repeat 2 49 0 3 911 513 0 0 0 chr17 42737263 42737320 -52535331 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 911 584 62 12 0 chr17 42738262 42738343 -52534308 + (TCTTG)n Simple_repeat Simple_repeat 5 86 0 3 911 495 0 0 0 chr17 42738359 42738414 -52534237 + (TG)n Simple_repeat Simple_repeat 1 55 0 3 911 486 311 7 22 chr17 42738469 42738607 -52534044 - ID_B1 SINE B4 -5 219 84 3 911 2081 83 4 11 chr17 42738974 42739243 -52533408 + Lx4A LINE L1 6341 6607 -451 3 911 2984 60 13 3 chr17 42739254 42739639 -52533012 - L1_Mus3 LINE L1 -4 6634 6246 3 911 2919 132 15 4 chr17 42739637 42740100 -52532551 + Lx4A LINE L1 6590 7057 -1 3 911 186 71 0 0 chr17 42740109 42740137 -52532514 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 3 911 926 89 0 53 chr17 42741199 42741389 -52531262 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 911 409 199 13 0 chr17 42741477 42741633 -52531018 + (TG)n Simple_repeat Simple_repeat 2 159 0 3 911 364 278 22 22 chr17 42741682 42741862 -52530789 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 911 586 273 183 12 chr17 42741865 42742106 -52530545 - B4A SINE B4 -1 291 10 3 911 591 271 122 44 chr17 42742511 42742781 -52529870 + B4A SINE B4 2 292 0 3 911 338 351 0 25 chr17 42742784 42742942 -52529709 + (CATATA)n Simple_repeat Simple_repeat 6 159 0 3 911 482 242 29 29 chr17 42742992 42743128 -52529523 + ID_B1 SINE B4 89 224 0 3 911 260 130 0 36 chr17 42743144 42743200 -52529451 + GA-rich Low_complexity Low_complexity 3 56 0 3 911 307 247 102 48 chr17 42743205 42743322 -52529329 - Lx7 LINE L1 -8 7688 7561 3 911 1001 53 30 0 chr17 42743322 42743453 -52529198 + B1_Mus2 SINE Alu 1 135 -12 3 911 708 45 0 0 chr17 42743454 42743542 -52529109 + (GAA)n Simple_repeat Simple_repeat 2 89 0 3 911 307 247 102 48 chr17 42743542 42743588 -52529063 - Lx7 LINE L1 -136 7560 7514 3 911 351 0 0 0 chr17 42743599 42743638 -52529013 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 3 911 336 222 142 71 chr17 42743643 42743798 -52528853 - Lx7 LINE L1 -374 7322 7157 3 911 35 41 0 0 chr17 42743853 42743902 -52528749 + AT_rich Low_complexity Low_complexity 1 49 0 3 911 270 0 0 0 chr17 42745869 42745899 -52526752 + (T)n Simple_repeat Simple_repeat 1 30 0 3 911 203 257 14 0 chr17 42746875 42746949 -52525702 + GA-rich Low_complexity Low_complexity 1 75 0 3 911 651 188 45 8 chr17 42747077 42747211 -52525440 - B1_Mur1 SINE Alu -8 141 3 3 911 318 252 38 155 chr17 42747240 42747598 -52525053 - MER33 DNA MER1_type -2 322 1 3 911 204 328 0 0 chr17 42747747 42747811 -52524840 + MIR3 SINE MIR 115 178 -30 3 911 198 0 0 0 chr17 42748424 42748446 -52524205 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 3 911 656 257 60 39 chr17 42748838 42749020 -52523631 + Lx8 LINE L1 7154 7339 -134 3 911 267 122 0 0 chr17 42749044 42749093 -52523558 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 911 1011 166 32 27 chr17 42749109 42749295 -52523356 + B2_Mm2 SINE B2 1 187 -8 3 911 574 270 39 22 chr17 42749302 42749480 -52523171 + B3A SINE B2 2 182 -16 3 911 293 291 0 0 chr17 42749481 42749567 -52523084 + (CA)n Simple_repeat Simple_repeat 1 86 0 3 911 381 260 0 0 chr17 42749571 42749740 -52522911 + (CATA)n Simple_repeat Simple_repeat 2 170 0 3 911 1163 161 26 0 chr17 42750995 42751188 -52521463 + Lx5 LINE L1 6567 6764 -286 3 911 343 174 70 0 chr17 42751291 42751377 -52521274 + ORR1D1 LTR MaLR 232 323 -51 3 911 387 0 0 0 chr17 42751378 42751421 -52521230 + (TAG)n Simple_repeat Simple_repeat 1 43 0 3 911 436 270 0 13 chr17 42752160 42752294 -52520357 + GA-rich Low_complexity Low_complexity 1 133 0 3 911 378 0 0 0 chr17 42752294 42752336 -52520315 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 911 436 270 0 13 chr17 42752336 42752351 -52520300 + polypurine Low_complexity Low_complexity 134 148 0 3 911 385 304 64 101 chr17 42753069 42753395 -52519256 + RLTR25A LTR ERVK 1 314 -789 3 911 555 16 0 0 chr17 42757467 42757531 -52515120 + (GA)n Simple_repeat Simple_repeat 1 64 0 3 911 2348 65 55 0 chr17 42758006 42758315 -52514336 - L1Md_F2 LINE L1 -296 5587 5262 3 911 8420 36 1 3 chr17 42758315 42759297 -52513354 + L1Md_F2 LINE L1 5603 6582 0 3 911 583 305 87 96 chr17 42759489 42759844 -52512807 + ORR1E LTR MaLR 8 359 0 3 911 890 242 31 31 chr17 42760125 42760427 -52512224 + L1_Rod LINE L1 5492 5829 -51 3 911 408 250 85 8 chr17 42760443 42760572 -52512079 + L1MC LINE L1 3058 3196 -2950 3 911 820 273 5 5 chr17 42760607 42760683 -52511968 + ID SINE ID 6 81 -143 3 911 350 352 23 0 chr17 42760683 42760811 -52511840 + B1F SINE Alu 1 131 -18 3 911 7884 110 10 11 chr17 42760918 42762910 -52509741 + L1_Mus4 LINE L1 4647 6633 -3 3 911 243 0 0 0 chr17 42763517 42763544 -52509107 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 911 244 316 25 0 chr17 42763850 42763929 -52508722 + ID4 SINE ID 2 82 -1 3 911 871 289 67 27 chr17 42764577 42764876 -52507775 + RMER15 LTR ERVL 246 556 -19 3 911 336 316 102 34 chr17 42765100 42765277 -52507374 + B3A SINE B2 7 195 -3 4 911 563 223 7 65 chr17 42765280 42765419 -52507232 + B3A SINE B2 3 133 -65 4 911 180 0 0 0 chr17 42765426 42765446 -52507205 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 911 515 185 0 61 chr17 42765471 42765586 -52507065 - B1_Mur2 SINE Alu 0 149 42 4 911 601 165 0 10 chr17 42767725 42767829 -52504822 - RLTR41 LTR ERV1 0 446 344 4 911 1014 285 72 23 chr17 42767831 42767869 -52504782 - Lx8 LINE L1 -322 7151 7115 4 911 1938 148 28 9 chr17 42767869 42768190 -52504461 - ORR1A2 LTR MaLR 0 327 1 4 911 1014 285 72 23 chr17 42768190 42768499 -52504152 - Lx8 LINE L1 -359 7114 6787 4 911 1088 163 97 9 chr17 42768503 42768669 -52503982 + ORR1C2 LTR MaLR 1 171 -213 4 911 558 0 0 0 chr17 42768669 42768731 -52503920 + (TC)n Simple_repeat Simple_repeat 1 62 0 4 911 1088 118 540 5 chr17 42768731 42768821 -52503830 + ORR1C2 LTR MaLR 172 318 -66 4 911 188 122 24 0 chr17 42768821 42768862 -52503789 + (TA)n Simple_repeat Simple_repeat 1 42 0 4 911 25 31 0 0 chr17 42768869 42768901 -52503750 + AT_rich Low_complexity Low_complexity 1 32 0 4 911 31 44 0 0 chr17 42769113 42769158 -52503493 + AT_rich Low_complexity Low_complexity 1 45 0 4 911 1968 125 56 9 chr17 42769179 42769518 -52503133 - ORR1B2 LTR MaLR 0 367 13 4 911 8592 185 44 5 chr17 42769518 42770532 -52502119 - L1_Mur3 LINE L1 -2803 3074 2050 4 911 396 0 0 0 chr17 42770532 42770576 -52502075 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 911 8592 199 43 33 chr17 42770576 42771718 -52500933 - L1_Mur3 LINE L1 -3828 2049 892 4 911 2675 101 3 0 chr17 42772211 42772587 -52500064 - L1_Mus3 LINE L1 0 6638 6262 4 911 5931 53 1 0 chr17 42772588 42773304 -52499347 - L1_Mus1 LINE L1 0 6567 5851 4 911 240 33 0 0 chr17 42773304 42773334 -52499317 - L1_Mus3 LINE L1 -366 6272 6243 4 911 507 250 165 21 chr17 42773336 42773517 -52499134 - RMER21B LTR ERV1 -266 576 369 4 911 1893 159 23 9 chr17 42773517 42773866 -52498785 - ORR1B1 LTR MaLR 0 394 41 4 911 326 245 0 20 chr17 42773873 42773973 -52498678 - RMER21A LTR ERV1 -455 492 395 4 911 837 203 44 26 chr17 42774274 42774475 -52498176 + Lx4B LINE L1 6750 7046 -12 4 911 387 0 0 0 chr17 42774475 42774518 -52498133 + (TAA)n Simple_repeat Simple_repeat 2 44 0 4 911 613 192 0 0 chr17 42774547 42774667 -52497984 - MTC LTR MaLR -301 120 1 4 911 1342 279 67 14 chr17 42774739 42775309 -52497342 + Charlie5 DNA MER1_type 1573 2172 -452 4 911 317 333 49 5 chr17 42775364 42775548 -52497103 + L1M5 LINE L1 2600 2791 -3355 4 911 207 0 0 0 chr17 42775850 42775873 -52496778 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 911 345 82 0 0 chr17 42776309 42776358 -52496293 + (TCTG)n Simple_repeat Simple_repeat 2 50 0 4 911 2427 221 177 58 chr17 42777470 42778278 -52494373 + RMER13B LTR ERVK 1 904 -4 4 911 545 279 27 20 chr17 42778450 42778600 -52494051 - B3A SINE B2 -32 166 16 4 911 4197 183 66 23 chr17 42778802 42779189 -52493462 + RMER21A LTR ERV1 1 415 -532 4 911 216 0 0 0 chr17 42779189 42779213 -52493438 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4 911 4197 183 66 23 chr17 42779213 42779733 -52492918 + RMER21A LTR ERV1 416 947 0 4 911 407 212 0 0 chr17 42779733 42779803 -52492848 + RMER21B LTR ERV1 765 834 -8 4 911 563 226 392 23 chr17 42779808 42780159 -52492492 - RMER15 LTR ERVL -57 518 39 4 911 325 222 91 0 chr17 42781806 42781905 -52490746 - RMER5 LTR ERV1 -15 519 412 4 911 1774 159 16 87 chr17 42781998 42782015 -52490636 - ORR1B1 LTR MaLR 0 394 378 4 911 421 32 32 16 chr17 42782015 42782078 -52490573 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 4 911 1774 157 12 73 chr17 42782078 42782448 -52490203 - ORR1B1 LTR MaLR -17 377 1 4 911 212 308 15 0 chr17 42782726 42782791 -52489860 + ID4 SINE ID 9 74 -9 4 911 304 314 30 30 chr17 42782833 42782997 -52489654 + L2 LINE L2 1463 1626 -1793 4 911 656 245 0 45 chr17 42783443 42783597 -52489054 + RSINE1 SINE B4 2 148 -17 4 911 414 0 0 0 chr17 42783621 42783667 -52488984 + (GA)n Simple_repeat Simple_repeat 2 47 0 4 911 741 291 80 63 chr17 42783749 42784223 -52488428 + MLT1D LTR MaLR 23 504 -1 4 911 41 21 0 0 chr17 42784336 42784384 -52488267 + AT_rich Low_complexity Low_complexity 1 48 0 4 911 1166 271 70 132 chr17 42784452 42784594 -52488057 + L1_Mur3 LINE L1 4582 4707 -1436 4 911 1192 75 0 0 chr17 42784594 42784740 -52487911 + B1_Mus1 SINE Alu 1 146 -2 4 911 1965 241 75 67 chr17 42784740 42785408 -52487243 + L1_Mur3 LINE L1 4647 5315 -565 4 911 474 18 0 0 chr17 42786536 42786591 -52486060 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 911 342 0 0 0 chr17 42786591 42786628 -52486023 + (GA)n Simple_repeat Simple_repeat 2 39 0 4 911 411 178 37 0 chr17 42786660 42786756 -52485895 + GA-rich Low_complexity Low_complexity 5 102 0 4 911 979 90 11 43 chr17 42786756 42786942 -52485709 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 4 911 547 237 64 0 chr17 42786974 42787147 -52485504 + MTEb LTR MaLR 178 361 -18 4 911 8454 42 11 1 chr17 42787239 42788614 -52484037 - L1Md_F3 LINE L1 0 6584 5227 4 911 615 81 0 0 chr17 42788815 42788901 -52483750 + (GA)n Simple_repeat Simple_repeat 2 87 0 4 911 342 0 0 0 chr17 42789683 42789721 -52482930 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 4 911 902 201 113 117 chr17 42790078 42790313 -52482338 - MT2A LTR ERVL -117 484 93 4 911 384 22 0 0 chr17 42790313 42790358 -52482293 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 911 902 194 126 132 chr17 42790358 42790481 -52482170 - MT2A LTR ERVL -441 92 1 4 911 14120 66 26 13 chr17 42790763 42792876 -52479775 + L1VL4 LINE L1 680 2833 -726 4 911 1222 74 8 8 chr17 42792876 42793138 -52479513 + (TTTC)n Simple_repeat Simple_repeat 1 262 0 4 911 319 276 0 25 chr17 42793175 42793267 -52479384 + MTD LTR MaLR 38 127 -292 4 911 326 221 132 9 chr17 42793327 42793441 -52479210 + MTD LTR MaLR 239 366 -53 4 911 1206 183 23 0 chr17 42794662 42794881 -52477770 + URR1A DNA MER1_type 2 225 -1 4 911 4176 38 2 0 chr17 42795047 42795542 -52477109 + L1Md_F2 LINE L1 6087 6582 0 4 911 1112 81 0 13 chr17 42795841 42795991 -52476660 + B1_Mus1 SINE Alu 1 148 0 4 911 617 221 6 76 chr17 42797051 42797208 -52475443 - B1_Mur1 SINE Alu -2 147 2 4 911 22 0 0 0 chr17 42797360 42797382 -52475269 + AT_rich Low_complexity Low_complexity 1 22 0 4 911 846 281 85 30 chr17 42797412 42797640 -52475011 + MTE2a LTR MaLR 1 237 -182 4 911 216 0 0 0 chr17 42797640 42797664 -52474987 + (CAAG)n Simple_repeat Simple_repeat 3 26 0 4 911 846 267 76 13 chr17 42797664 42797831 -52474820 + MTE2a LTR MaLR 189 373 -6 4 911 214 162 0 0 chr17 42797913 42797950 -52474701 + CT-rich Low_complexity Low_complexity 1 37 0 4 911 727 312 164 40 chr17 42798533 42799081 -52473570 + Lx8 LINE L1 6854 7469 -4 4 911 276 312 62 34 chr17 42799891 42800037 -52472614 + MIRc SINE MIR 1 150 -118 4 911 199 178 41 82 chr17 42800004 42800053 -52472598 + MIR3 SINE MIR 119 165 -43 4 911 194 174 0 21 chr17 42800998 42801045 -52471606 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 4 911 523 243 0 43 chr17 42801260 42801376 -52471275 + PB1D7 SINE Alu 10 120 0 4 911 852 211 112 15 chr17 42801379 42801576 -52471075 + B3 SINE B2 1 216 0 4 911 418 282 70 6 chr17 42801869 42802040 -52470611 - MER58A DNA MER1_type -11 213 32 4 911 423 266 28 6 chr17 42802640 42802756 -52469895 + PB1D7 SINE Alu 8 120 0 4 911 621 287 0 24 chr17 42802780 42802948 -52469703 + RSINE1 SINE B4 2 165 0 4 911 610 132 30 6 chr17 42803002 42803170 -52469481 + (TAGA)n Simple_repeat Simple_repeat 3 174 0 4 911 2487 152 32 10 chr17 42805008 42805420 -52467231 + MTC LTR MaLR 1 421 0 4 911 722 225 101 0 chr17 42805420 42805598 -52467053 + B3 SINE B2 21 216 0 4 911 308 214 17 17 chr17 42805611 42805730 -52466921 + (TA)n Simple_repeat Simple_repeat 1 119 0 4 911 234 170 31 31 chr17 42805741 42805838 -52466813 + (TA)n Simple_repeat Simple_repeat 2 98 0 4 911 812 254 41 5 chr17 42806074 42806268 -52466383 + ID_B1 SINE B4 17 217 -7 4 911 22 0 0 0 chr17 42807255 42807277 -52465374 + AT_rich Low_complexity Low_complexity 1 22 0 4 911 673 270 5 71 chr17 42807284 42807495 -52465156 - B3A SINE B2 0 198 2 4 911 315 213 13 26 chr17 42807500 42807558 -52465093 - B4A SINE B4 -72 220 164 4 911 3638 161 114 23 chr17 42807558 42808373 -52464278 + RLTR13D6 LTR ERVK 2 890 -12 4 911 320 255 186 28 chr17 42808380 42808525 -52464126 - B4 SINE B4 -123 169 2 4 911 930 252 80 56 chr17 42809885 42810222 -52462429 + ORR1D2 LTR MaLR 5 349 -21 4 911 642 230 56 93 chr17 42810207 42810454 -52462197 - RLTR15 LTR ERVK -17 342 106 4 911 1083 85 0 0 chr17 42810454 42810619 -52462032 + (TTCTC)n Simple_repeat Simple_repeat 5 169 0 4 911 642 230 56 93 chr17 42810619 42810726 -52461925 - RLTR15 LTR ERVK -254 105 1 4 911 275 200 15 15 chr17 42810729 42810795 -52461856 + ORR1D2 LTR MaLR 304 369 -1 4 911 292 283 65 0 chr17 42810951 42811043 -52461608 + MER82 DNA MER2_type 1 98 -555 4 911 218 274 0 0 chr17 42811034 42811096 -52461555 - B3 SINE B2 -154 62 1 4 911 252 284 0 0 chr17 42811152 42811219 -52461432 - MER58A DNA MER1_type -96 128 62 4 911 395 294 35 14 chr17 42811348 42811493 -52461158 + B1F1 SINE Alu 1 148 -1 4 911 1018 30 8 0 chr17 42812299 42812432 -52460219 + B1_Mm SINE Alu 14 147 0 4 911 895 87 14 7 chr17 42812441 42812580 -52460071 + (GAAA)n Simple_repeat Simple_repeat 2 141 0 4 911 213 94 0 0 chr17 42813426 42813458 -52459193 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 4 911 1389 260 46 0 chr17 42813829 42814198 -52458453 + MTD LTR MaLR 34 419 0 4 911 1115 184 26 4 chr17 42814280 42814509 -52458142 + Lx4B LINE L1 6809 7042 -16 4 911 297 0 0 0 chr17 42814509 42814542 -52458109 + (CAAT)n Simple_repeat Simple_repeat 4 36 0 4 911 23 68 0 0 chr17 42814656 42814700 -52457951 + AT_rich Low_complexity Low_complexity 1 44 0 4 911 596 301 139 8 chr17 42814771 42815016 -52457635 - Lx6 LINE L1 -26 7434 7158 4 911 4013 87 22 7 chr17 42815359 42815914 -52456737 + L1_Mus3 LINE L1 6064 6626 -12 4 911 6761 62 16 1 chr17 42815949 42817472 -52455179 - L1VL4 LINE L1 -1826 1733 183 4 911 228 226 38 0 chr17 42817563 42817616 -52455035 + B4A SINE B4 152 206 -86 5 911 356 200 12 0 chr17 42817645 42817730 -52454921 + GA-rich Low_complexity Low_complexity 2 87 0 5 911 1348 221 65 26 chr17 42818321 42818661 -52453990 - ORR1D2 LTR MaLR -13 357 5 5 911 4453 137 40 19 chr17 42819043 42819275 -52453376 + Lx6 LINE L1 4398 4637 -1243 5 911 432 0 0 0 chr17 42819275 42819323 -52453328 + (TAAA)n Simple_repeat Simple_repeat 4 51 0 5 911 4453 137 40 19 chr17 42819323 42819894 -52452757 + Lx6 LINE L1 4638 5217 -663 5 911 1392 250 48 147 chr17 42819894 42820500 -52452151 - RLTR1D LTR ERV1 0 605 60 5 911 7635 189 68 42 chr17 42820555 42822721 -52449930 + Lx6 LINE L1 5226 7456 -4 5 911 966 68 114 0 chr17 42822725 42822857 -52449794 + B1_Mm SINE Alu 1 147 0 5 911 276 111 0 0 chr17 42822857 42822902 -52449749 + (A)n Simple_repeat Simple_repeat 1 45 0 5 911 222 171 0 0 chr17 42823321 42823362 -52449289 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 911 422 274 0 0 chr17 42823853 42823955 -52448696 + PB1D10 SINE Alu 2 103 -14 5 911 455 259 9 6 chr17 42823971 42824283 -52448368 + GA-rich Low_complexity Low_complexity 1 312 0 5 911 504 242 0 0 chr17 42824310 42824463 -52448188 + GA-rich Low_complexity Low_complexity 4 156 0 5 911 215 277 0 0 chr17 42824474 42824521 -52448130 + polypurine Low_complexity Low_complexity 3 49 0 5 911 621 27 0 0 chr17 42824732 42824807 -52447844 + (TG)n Simple_repeat Simple_repeat 2 76 0 5 911 411 318 13 20 chr17 42825266 42825417 -52447234 + RSINE1 SINE B4 3 152 -13 5 911 243 0 0 0 chr17 42825420 42825447 -52447204 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 911 744 12 0 0 chr17 42825862 42825947 -52446704 + (CCCTAG)n Simple_repeat Simple_repeat 2 86 0 5 911 210 176 19 38 chr17 42826733 42826786 -52445865 + (TGAA)n Simple_repeat Simple_repeat 1 52 0 5 911 279 271 247 24 chr17 42826923 42827093 -52445558 - MER2 DNA MER2_type -42 303 96 5 911 480 35 0 0 chr17 42827235 42827293 -52445358 + (GGGA)n Simple_repeat Simple_repeat 3 60 0 5 911 229 164 32 32 chr17 42827338 42827401 -52445250 + GA-rich Low_complexity Low_complexity 5 67 0 5 911 276 102 0 0 chr17 42827972 42828021 -52444630 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 911 451 217 163 44 chr17 42829642 42829777 -52442874 - RSINE1 SINE B4 -10 155 5 5 911 198 342 84 17 chr17 42830849 42830968 -52441683 - MIRb SINE MIR -38 230 104 5 911 815 229 89 33 chr17 42831692 42831963 -52440688 + B4A SINE B4 5 290 -2 5 911 270 333 13 40 chr17 42832119 42832269 -52440382 - B1F2 SINE Alu -2 147 2 5 911 307 320 0 0 chr17 42833512 42833590 -52439061 - ID_B1 SINE B4 -11 213 136 5 911 673 194 12 0 chr17 42834734 42834904 -52437747 + GA-rich Low_complexity Low_complexity 2 173 0 5 911 307 148 44 15 chr17 42834918 42835055 -52437596 + GA-rich Low_complexity Low_complexity 1 141 0 5 911 337 250 76 135 chr17 42835522 42835707 -52436944 - MER5B DNA MER1_type -4 174 1 5 911 562 184 9 9 chr17 42835933 42836043 -52436608 + ORR1C1 LTR MaLR 3 112 -266 5 911 240 154 58 0 chr17 42836162 42836214 -52436437 + G-rich Low_complexity Low_complexity 4 58 0 5 911 655 156 28 23 chr17 42836214 42836391 -52436260 + GA-rich Low_complexity Low_complexity 1 178 0 5 911 4684 46 14 0 chr17 42837233 42837803 -52434848 + L1Md_F2 LINE L1 6005 6582 0 5 911 225 94 0 0 chr17 42838150 42838182 -52434469 + (ATG)n Simple_repeat Simple_repeat 2 33 0 5 911 286 327 47 0 chr17 42839168 42839275 -52433376 - Tigger5 DNA MER2_type -1 2405 2294 5 911 510 276 35 197 chr17 42839264 42839548 -52433103 - Tigger5 DNA MER2_type -2167 239 2 5 911 265 255 70 78 chr17 42839788 42839903 -52432748 - B3 SINE B2 0 216 103 5 911 692 213 81 96 chr17 42839979 42840301 -52432350 + RMER20B LTR ERVK 96 412 -215 5 911 209 315 118 25 chr17 42840571 42840715 -52431936 + MIR SINE MIR 56 217 -51 5 911 924 211 14 36 chr17 42840770 42840991 -52431660 + B3 SINE B2 1 216 0 5 911 243 0 0 0 chr17 42841373 42841400 -52431251 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 911 209 309 44 0 chr17 42842300 42842368 -52430283 + (TATATG)n Simple_repeat Simple_repeat 5 75 0 5 911 325 215 34 25 chr17 42842733 42842843 -52429808 - RSINE1 SINE B4 -173 119 2 5 911 21 0 0 0 chr17 42843025 42843046 -52429605 + AT_rich Low_complexity Low_complexity 1 21 0 5 911 569 191 70 116 chr17 42843047 42843219 -52429432 + ORR1D1 LTR MaLR 1 164 -210 5 911 874 191 0 0 chr17 42843457 42843594 -52429057 + B1_Mur2 SINE Alu 3 139 -10 5 911 183 80 0 0 chr17 42843594 42843619 -52429032 + (TAA)n Simple_repeat Simple_repeat 2 26 0 5 911 297 246 0 0 chr17 42843704 42843773 -52428878 - ID4_ SINE ID -13 70 2 5 911 1659 187 74 103 chr17 42844919 42845097 -52427554 + ORR1B1 LTR MaLR 1 165 -229 5 911 792 152 244 28 chr17 42845097 42845273 -52427378 + B3 SINE B2 3 216 0 5 911 1659 187 74 103 chr17 42845273 42845500 -52427151 + ORR1B1 LTR MaLR 166 394 0 5 911 930 226 72 5 chr17 42846473 42846682 -52425969 + ID_B1 SINE B4 2 224 0 5 911 412 338 0 6 chr17 42848432 42848590 -52424061 + MER5A1 DNA MER1_type 2 158 -8 5 911 232 186 23 0 chr17 42848667 42848710 -52423941 - RMER30 DNA MER1_type -151 51 8 5 911 737 284 28 69 chr17 42848710 42848998 -52423653 + B4A SINE B4 1 276 -16 5 911 324 120 0 0 chr17 42849021 42849071 -52423580 + (CACG)n Simple_repeat Simple_repeat 2 51 0 5 911 301 22 21 21 chr17 42850645 42850692 -52421959 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 5 911 503 266 122 0 chr17 42850701 42850840 -52421811 + B3A SINE B2 1 156 -42 5 911 562 296 70 99 chr17 42852426 42852768 -52419883 + Arthur1 DNA Tip100 1 332 -3615 5 911 345 280 111 29 chr17 42852774 42853017 -52419634 + Arthur1 DNA Tip100 3338 3600 -347 5 911 628 194 133 17 chr17 42853029 42853202 -52419449 + B3 SINE B2 9 201 -15 5 911 703 115 7 7 chr17 42853268 42853408 -52419243 + (TA)n Simple_repeat Simple_repeat 2 141 0 5 911 240 206 95 32 chr17 42853561 42853656 -52418995 + Arthur1 DNA Tip100 3803 3903 -44 5 911 975 151 34 12 chr17 42857489 42858069 -52414582 + (TAGA)n Simple_repeat Simple_repeat 1 592 0 5 911 3353 41 8 0 chr17 42858069 42858462 -52414189 + MTA_Mm LTR MaLR 1 396 0 5 911 790 100 41 12 chr17 42858462 42858625 -52414026 + (TAGA)n Simple_repeat Simple_repeat 4 172 0 5 113 14608 83 5 8 chr17 42858714 42861616 -52411035 + L1VL2 LINE L1 94 2987 -628 5 912 480 18 0 0 chr17 42862789 42862846 -52409805 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 912 690 321 28 0 chr17 42862894 42863112 -52409539 + B4A SINE B4 1 224 -68 5 912 389 308 92 4 chr17 42863133 42863286 -52409365 + B3A SINE B2 40 203 -13 5 912 488 219 89 0 chr17 42863353 42863476 -52409175 - B1_Mur2 SINE Alu -5 144 11 5 912 414 0 0 0 chr17 42863519 42863565 -52409086 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 912 1022 58 117 0 chr17 42863565 42863719 -52408932 + B2_Mm2 SINE B2 9 180 -15 5 912 636 14 0 0 chr17 42863719 42863792 -52408859 + (GA)n Simple_repeat Simple_repeat 1 73 0 5 912 273 343 0 36 chr17 42864963 42865075 -52407576 + RMER12 LTR ERVK 749 856 -466 5 912 460 223 0 11 chr17 42866426 42866603 -52406048 + (CA)n Simple_repeat Simple_repeat 2 176 0 5 912 921 173 162 0 chr17 42866706 42866897 -52405754 + ID_B1 SINE B4 2 223 -1 5 912 343 363 58 34 chr17 42867049 42867257 -52405394 + MLT2B3 LTR ERVL 1 213 -341 5 912 387 155 0 0 chr17 42867606 42867690 -52404961 + (CA)n Simple_repeat Simple_repeat 1 84 0 5 912 207 0 0 0 chr17 42867834 42867857 -52404794 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 912 620 211 117 0 chr17 42867912 42868040 -52404611 + B1_Mur1 SINE Alu 5 147 -2 5 912 282 297 109 44 chr17 42868047 42868230 -52404421 + HAL1b LINE L1 1582 1776 -233 5 912 457 248 46 0 chr17 42868601 42868710 -52403941 + B3A SINE B2 1 114 -84 5 912 374 214 36 0 chr17 42868732 42868816 -52403835 + RLTR25A LTR ERVK 1 87 -1016 5 912 2605 157 202 89 chr17 42868817 42869670 -52402981 + RLTR25B LTR ERVK 1 949 -79 5 912 630 109 0 0 chr17 42870132 42870242 -52402409 + (TG)n Simple_repeat Simple_repeat 1 110 0 5 912 441 0 0 0 chr17 42870242 42870290 -52402361 + (GA)n Simple_repeat Simple_repeat 1 49 0 5 912 336 68 0 0 chr17 42870291 42870335 -52402316 - ORR1A4 LTR MaLR -11 315 272 5 912 4691 77 2 7 chr17 42870353 42870970 -52401681 - L1_Mus2 LINE L1 0 6566 5953 5 912 3856 75 15 0 chr17 42870970 42871492 -52401159 - L1_Mm LINE L1 -1296 4587 4058 5 912 1135 94 0 6 chr17 42871492 42871653 -52400998 + L1_Mm LINE L1 5004 5163 -720 5 912 697 205 0 0 chr17 42871653 42871838 -52400813 - ORR1A4-int LTR MaLR -1060 903 719 5 912 1329 147 59 63 chr17 42871798 42872052 -52400599 - MT2B LTR ERVL -314 287 35 5 912 4111 129 59 49 chr17 42871866 42872664 -52399987 - ORR1A4-int LTR MaLR -1157 806 1 5 912 1896 108 12 60 chr17 42872669 42873005 -52399646 - ORR1A4 LTR MaLR -9 320 1 5 912 448 244 33 16 chr17 42873261 42873382 -52399269 - RSINE1 SINE B4 0 165 43 5 912 541 212 71 0 chr17 42874340 42874453 -52398198 - RSINE1 SINE B4 -41 124 4 5 912 1566 114 1 0 chr17 42875359 42875610 -52397041 + L1_Mus2 LINE L1 6297 6594 -44 5 912 947 90 12 25 chr17 42875967 42876127 -52396524 + L1_Mus3 LINE L1 6480 6637 -1 5 912 953 236 14 23 chr17 42876205 42876422 -52396229 + B3 SINE B2 2 216 0 5 912 25 0 0 0 chr17 42876422 42876447 -52396204 + AT_rich Low_complexity Low_complexity 1 25 0 5 912 382 275 198 16 chr17 42876999 42877229 -52395422 + B4A SINE B4 1 272 -20 5 912 384 22 0 0 chr17 42877286 42877331 -52395320 + (TC)n Simple_repeat Simple_repeat 1 45 0 5 912 315 0 0 0 chr17 42877331 42877365 -52395286 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 912 394 233 48 19 chr17 42877719 42877824 -52394827 + RSINE1 SINE B4 3 110 -55 5 912 875 71 28 0 chr17 42877942 42878083 -52394568 + (TCTA)n Simple_repeat Simple_repeat 1 145 0 5 912 1354 251 37 6 chr17 42878084 42878409 -52394242 - Lx5 LINE L1 -21 7029 6695 5 912 600 14 0 0 chr17 42879187 42879256 -52393395 + (TC)n Simple_repeat Simple_repeat 1 69 0 5 912 317 230 0 0 chr17 42879611 42879685 -52392966 + MLT1I LTR MaLR 338 411 0 6 912 369 0 0 0 chr17 42879757 42879798 -52392853 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 6 912 439 261 103 81 chr17 42879983 42880254 -52392397 - MTD LTR MaLR 0 419 143 6 912 615 259 70 12 chr17 42881446 42881618 -52391033 - MTD LTR MaLR -237 182 1 6 912 539 270 250 31 chr17 42882090 42882243 -52390408 + Lx8 LINE L1 7156 7322 -151 6 912 291 28 0 0 chr17 42882243 42882279 -52390372 + (GGGTG)n Simple_repeat Simple_repeat 3 38 0 6 912 539 270 250 31 chr17 42882279 42882385 -52390266 + Lx8 LINE L1 7323 7472 -1 6 912 30 27 0 0 chr17 42883466 42883503 -52389148 + AT_rich Low_complexity Low_complexity 1 37 0 6 912 260 341 22 81 chr17 42883721 42883906 -52388745 + MLT1L LTR MaLR 308 481 -129 6 912 2939 48 3 0 chr17 42884209 42884565 -52388086 - L1_Mus1 LINE L1 0 6567 6211 6 912 2179 129 19 29 chr17 42884870 42885284 -52387367 - RMER17C LTR ERVK 0 410 1 6 912 263 200 33 16 chr17 42885284 42885345 -52387306 + B4A SINE B4 203 264 -28 6 912 423 0 0 0 chr17 42885611 42885658 -52386993 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 912 341 202 162 0 chr17 42885671 42885770 -52386881 + ID_B1 SINE B4 110 224 0 6 912 1224 168 18 0 chr17 42886253 42886473 -52386178 - MTC LTR MaLR -2 419 196 6 912 3245 196 71 31 chr17 42886473 42887191 -52385460 - RMER1B Other Other -1 1065 1 6 912 961 189 26 20 chr17 42887221 42887416 -52385235 - MTC LTR MaLR -225 196 1 6 912 3148 147 9 15 chr17 42887508 42888039 -52384612 - RLTR11A LTR ERVK 0 528 1 6 912 402 156 0 0 chr17 42890220 42890284 -52382367 - RMER15 LTR ERVL -60 515 452 6 912 879 230 79 63 chr17 42890319 42890635 -52382016 + RMER17C LTR ERVK 1 321 -89 6 912 866 242 19 43 chr17 42890660 42890867 -52381784 - RMER15 LTR ERVL -155 420 219 6 912 297 0 0 0 chr17 42891067 42891100 -52381551 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 912 492 287 93 47 chr17 42891386 42891558 -52381093 + B3A SINE B2 1 180 -18 6 912 1241 48 7 14 chr17 42891595 42891743 -52380908 + B1_Mm SINE Alu 1 147 0 6 912 244 283 0 32 chr17 42892240 42892335 -52380316 - Lx6 LINE L1 -26 7434 7343 6 912 292 309 0 0 chr17 42892564 42892632 -52380019 + B4 SINE B4 44 111 -181 6 912 457 267 100 53 chr17 42892670 42892860 -52379791 + B4A SINE B4 93 291 -1 6 912 258 32 0 0 chr17 42892860 42892891 -52379760 + (GA)n Simple_repeat Simple_repeat 2 32 0 6 912 495 294 236 29 chr17 42892904 42893247 -52379404 - MER110 LTR ERV1 -31 460 47 6 912 347 105 18 0 chr17 42893996 42894053 -52378598 + (CATA)n Simple_repeat Simple_repeat 3 60 0 6 912 34429 97 2 65 chr17 42894198 42895426 -52377225 + L1Md_F2 LINE L1 469 1616 -4267 6 912 4514 19 2 0 chr17 42895426 42895907 -52376744 - LTRIS_Mm LTR ERV1 0 482 1 6 912 34429 62 2 1 chr17 42895907 42899872 -52372779 + L1Md_F2 LINE L1 1617 5586 -297 6 912 8623 49 0 3 chr17 42899872 42900871 -52371780 + L1Md_F2 LINE L1 5587 6582 0 6 912 312 109 0 5 chr17 42900888 42900949 -52371702 + B2_Mm2 SINE B2 1 60 -156 6 912 34437 100 52 46 chr17 42901019 42902109 -52370542 + L1Md_F2 LINE L1 129 1616 -4267 6 912 4514 19 2 0 chr17 42902109 42902590 -52370061 - LTRIS_Mm LTR ERV1 0 482 1 6 912 34437 62 2 1 chr17 42902590 42906555 -52366096 + L1Md_F2 LINE L1 1617 5586 -297 6 912 8623 49 0 3 chr17 42906555 42907554 -52365097 + L1Md_F2 LINE L1 5587 6582 0 6 912 312 109 0 5 chr17 42907571 42907632 -52365019 + B2_Mm2 SINE B2 1 60 -156 6 912 36041 55 11 10 chr17 42907702 42912762 -52359889 + L1Md_F3 LINE L1 129 5585 -298 6 912 8429 50 10 0 chr17 42912763 42913751 -52358900 + L1Md_F3 LINE L1 5587 6584 0 6 912 399 184 0 0 chr17 42913972 42914059 -52358592 + (TG)n Simple_repeat Simple_repeat 2 88 0 6 912 919 89 52 7 chr17 42914494 42914630 -52358021 + B2_Mm2 SINE B2 27 168 -27 6 912 266 241 17 0 chr17 42914643 42914701 -52357950 + RMER15 LTR ERVL 504 562 -13 6 912 290 333 23 77 chr17 42914860 42914990 -52357661 - RMER20B LTR ERVK -30 597 475 6 912 464 312 56 95 chr17 42915113 42915418 -52357233 - RMER20B LTR ERVK -110 517 170 6 912 551 152 0 21 chr17 42916552 42916646 -52356005 + B1_Mus1 SINE Alu 2 93 -55 6 912 342 0 0 0 chr17 42916656 42916694 -52355957 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 6 912 423 0 0 0 chr17 42916694 42916740 -52355911 + (ATTAG)n Simple_repeat Simple_repeat 1 47 0 6 912 566 277 108 0 chr17 42916886 42917081 -52355570 + B3 SINE B2 1 216 0 6 912 374 190 47 76 chr17 42917149 42917267 -52355384 + MLT1A1 LTR MaLR 299 450 -17 6 912 244 0 56 0 chr17 42917454 42917490 -52355161 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 6 912 1169 221 23 5 chr17 42917729 42917943 -52354708 + ID_B1 SINE B4 1 218 -6 6 912 370 122 40 0 chr17 42917947 42918021 -52354630 + G-rich Low_complexity Low_complexity 6 82 0 6 912 380 267 66 11 chr17 42918031 42918122 -52354529 + PB1D7 SINE Alu 12 107 -13 6 912 418 202 34 0 chr17 42918321 42918410 -52354241 - MTEb LTR MaLR -12 367 276 6 912 180 286 0 0 chr17 42919068 42919110 -52353541 - MIRb SINE MIR -193 75 34 6 912 1336 255 168 16 chr17 42919381 42919756 -52352895 + Lx5 LINE L1 6598 7029 -21 6 912 203 0 37 0 chr17 42919756 42919783 -52352868 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 6 912 402 21 0 0 chr17 42919796 42919843 -52352808 + (GGAA)n Simple_repeat Simple_repeat 3 49 0 6 912 184 350 24 55 chr17 42920063 42920190 -52352461 + MIR SINE MIR 6 128 -134 6 912 369 109 0 0 chr17 42920196 42920251 -52352400 + (T)n Simple_repeat Simple_repeat 1 55 0 6 912 1230 68 0 0 chr17 42920251 42920398 -52352253 - B1_Mm SINE Alu 0 147 1 6 912 536 261 62 14 chr17 42920669 42920813 -52351838 + MTE2b LTR MaLR 21 171 -208 6 912 476 272 60 13 chr17 42920841 42920990 -52351661 + Lx9 LINE L1 6737 6892 -752 6 912 339 208 0 61 chr17 42921016 42921098 -52351553 + B3 SINE B2 54 130 -86 6 912 2681 157 55 18 chr17 42921114 42921621 -52351030 - RLTR11A2 LTR ERVK -1 526 1 6 912 1241 259 113 37 chr17 42921668 42922181 -52350470 + Lx9 LINE L1 6881 7432 -212 6 912 1782 209 26 47 chr17 42922237 42922619 -52350032 + ORR1D1 LTR MaLR 1 374 0 6 912 1368 49 45 80 chr17 42922769 42922968 -52349683 + B2_Mm2 SINE B2 3 194 -1 6 912 3100 80 28 10 chr17 42923166 42923559 -52349092 - MTB LTR MaLR 0 400 1 6 912 877 211 176 29 chr17 42923794 42924033 -52348618 - B4A SINE B4 -18 274 1 6 912 780 226 27 2 chr17 42924514 42924674 -52347977 + B3 SINE B2 2 163 -32 6 912 222 91 0 0 chr17 42924674 42924707 -52347944 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 912 540 227 70 70 chr17 42924707 42924731 -52347920 + B2_Mm2 SINE B2 164 186 -9 6 912 581 148 29 103 chr17 42925161 42925297 -52347354 + B1_Mur3 SINE Alu 24 149 0 6 912 1353 102 11 26 chr17 42925315 42925506 -52347145 + B2_Mm1t SINE B2 2 189 -4 6 912 3256 133 50 23 chr17 42925748 42926304 -52346347 + Lx4B LINE L1 6479 7049 -9 6 912 225 211 41 27 chr17 42926444 42926517 -52346134 + L1M4b LINE L1 2268 2341 -4993 6 912 239 299 102 0 chr17 42926771 42926898 -52345753 + L1M4b LINE L1 2992 3131 -3872 6 912 289 244 71 45 chr17 42927299 42927426 -52345225 + B4 SINE B4 168 292 0 6 912 24 32 0 0 chr17 42927517 42927548 -52345103 + AT_rich Low_complexity Low_complexity 1 31 0 6 912 362 325 102 45 chr17 42927972 42928149 -52344502 + B3A SINE B2 1 187 -11 6 912 474 18 0 0 chr17 42928221 42928276 -52344375 + (CATA)n Simple_repeat Simple_repeat 2 56 0 6 912 3960 29 9 9 chr17 42928732 42929186 -52343465 + L1Md_F3 LINE L1 6120 6573 -11 6 912 459 197 351 0 chr17 42929608 42929844 -52342807 + ORR1D1 LTR MaLR 5 325 -49 6 912 291 295 101 37 chr17 42930935 42931044 -52341607 - PB1D10 SINE Alu -1 116 1 6 912 573 291 22 0 chr17 42931590 42931724 -52340927 + ID_B1 SINE B4 80 216 -8 6 912 397 34 17 17 chr17 42932787 42932847 -52339804 + (TG)n Simple_repeat Simple_repeat 2 61 0 6 912 492 206 9 45 chr17 42933795 42933907 -52338744 + PB1D10 SINE Alu 9 116 -1 6 912 232 312 106 9 chr17 42934842 42934955 -52337696 + RMER20B LTR ERVK 187 310 -317 6 912 598 289 35 24 chr17 42935799 42935969 -52336682 + B3A SINE B2 27 198 0 6 912 289 131 16 16 chr17 42936085 42936147 -52336504 + GA-rich Low_complexity Low_complexity 2 63 0 6 912 2820 126 137 29 chr17 42936147 42936702 -52335949 + L1_Mus4 LINE L1 6022 6636 0 6 912 541 224 63 8 chr17 42936735 42936861 -52335790 + B3A SINE B2 66 198 0 6 912 2245 290 96 19 chr17 42936863 42937641 -52335010 + Lx8 LINE L1 6192 7029 -444 6 912 713 12 0 11 chr17 42937679 42937766 -52334885 + (GAGAA)n Simple_repeat Simple_repeat 5 90 0 6 912 1905 145 110 0 chr17 42937783 42938120 -52334531 + ORR1B1 LTR MaLR 1 374 -20 6 912 879 277 122 20 chr17 42938153 42938507 -52334144 + Lx8 LINE L1 7078 7467 -6 6 912 22 0 0 0 chr17 42938509 42938531 -52334120 + AT_rich Low_complexity Low_complexity 1 22 0 6 912 312 27 0 0 chr17 42939255 42939292 -52333359 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 912 294 29 0 0 chr17 42939292 42939327 -52333324 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 912 886 226 0 0 chr17 42939330 42939485 -52333166 + B3 SINE B2 1 155 -61 6 912 396 0 0 0 chr17 42939487 42939531 -52333120 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 912 329 197 0 16 chr17 42939541 42939603 -52333048 + B3 SINE B2 48 108 -108 6 912 1983 155 87 8 chr17 42939609 42939967 -52332684 - ORR1B1 LTR MaLR -8 386 1 6 912 290 303 26 0 chr17 42940027 42940103 -52332548 - RSINE1 SINE B4 -40 125 48 6 912 443 273 91 0 chr17 42940505 42940626 -52332025 + ID_B1 SINE B4 84 215 -9 6 912 278 323 55 124 chr17 42940626 42940649 -52332002 + 7SLRNA srpRNA srpRNA 2 135 -179 6 912 213 178 0 0 chr17 42940844 42940889 -52331762 + (CATATA)n Simple_repeat Simple_repeat 6 50 0 6 912 355 202 121 50 chr17 42941031 42941130 -52331521 - PB1D9 SINE Alu -9 111 6 6 912 342 0 0 0 chr17 42941475 42941513 -52331138 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 912 207 0 0 0 chr17 42941513 42941535 -52331116 + (TC)n Simple_repeat Simple_repeat 1 23 0 6 912 21 0 0 0 chr17 42942321 42942342 -52330309 + AT_rich Low_complexity Low_complexity 1 21 0 6 912 298 322 87 22 chr17 42942367 42942548 -52330103 - ID_B1 SINE B4 -1 223 9 7 912 423 0 0 0 chr17 42942592 42942639 -52330012 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 912 549 0 0 0 chr17 42942639 42942699 -52329952 + (TA)n Simple_repeat Simple_repeat 2 62 0 7 912 820 283 247 38 chr17 42943001 42943498 -52329153 + Lx7 LINE L1 6804 7395 -78 7 912 231 114 0 0 chr17 42943498 42943542 -52329109 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 912 419 293 141 68 chr17 42943542 42943606 -52329045 + Lx7 LINE L1 7396 7472 -1 7 912 884 66 239 26 chr17 42944210 42944365 -52328286 + B2_Mm2 SINE B2 2 189 -6 7 912 346 238 9 45 chr17 42944452 42944562 -52328089 + B1F2 SINE Alu 41 146 -3 7 912 318 106 0 0 chr17 42945253 42945300 -52327351 + (CATA)n Simple_repeat Simple_repeat 3 49 0 7 912 218 75 0 48 chr17 42945972 42946014 -52326637 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 7 912 432 86 0 0 chr17 42948587 42948657 -52323994 + (TATG)n Simple_repeat Simple_repeat 1 70 0 7 912 30 69 0 0 chr17 42949167 42949225 -52323426 + AT_rich Low_complexity Low_complexity 1 58 0 7 912 607 270 42 21 chr17 42949805 42949998 -52322653 - B3A SINE B2 0 198 2 7 912 610 214 8 0 chr17 42950777 42950894 -52321757 + B1_Mur2 SINE Alu 32 149 0 7 912 489 298 25 38 chr17 42950895 42951052 -52321599 + B3A SINE B2 28 182 -16 7 912 199 278 68 27 chr17 42951828 42951902 -52320749 + MIR SINE MIR 112 188 -74 7 912 22 56 0 0 chr17 42951935 42951971 -52320680 + AT_rich Low_complexity Low_complexity 1 36 0 7 912 209 57 29 0 chr17 42952101 42952136 -52320515 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 7 912 890 47 142 0 chr17 42952259 42952386 -52320265 - B1_Mus1 SINE Alu -1 147 3 7 912 490 171 213 31 chr17 42952462 42952589 -52320062 - B3 SINE B2 -66 150 1 7 912 31 0 0 0 chr17 42953547 42953578 -52319073 + AT_rich Low_complexity Low_complexity 1 31 0 7 912 862 219 53 11 chr17 42954227 42954416 -52318235 + B3 SINE B2 1 197 -19 7 912 733 203 34 27 chr17 42954525 42954672 -52317979 - B1_Mur2 SINE Alu -1 148 1 7 912 299 278 43 32 chr17 42955391 42955484 -52317167 + RSINE1 SINE B4 72 165 0 7 912 1717 228 88 55 chr17 42955567 42955677 -52316974 + L1MC1 LINE L1 5217 5324 -822 7 912 1140 34 0 58 chr17 42955677 42955833 -52316818 + B1_Mus1 SINE Alu 1 147 -1 7 912 1717 264 135 50 chr17 42955833 42956702 -52315949 + L1MC1 LINE L1 5323 6276 -57 7 912 367 246 200 24 chr17 42956758 42956883 -52315768 - RSINE1 SINE B4 -16 149 3 7 912 229 245 0 0 chr17 42956918 42956967 -52315684 + GA-rich Low_complexity Low_complexity 4 52 0 7 912 26 0 0 0 chr17 42957073 42957099 -52315552 + AT_rich Low_complexity Low_complexity 1 26 0 7 912 180 77 0 0 chr17 42957343 42957369 -52315282 + (CCCTAA)n Simple_repeat Simple_repeat 4 29 0 7 912 383 338 6 50 chr17 42957800 42957816 -52314835 + ID_B1 SINE B4 73 224 0 7 912 481 293 28 21 chr17 42957816 42957959 -52314692 + B1F2 SINE Alu 6 149 0 7 912 421 276 112 0 chr17 42958093 42958209 -52314442 + B1_Mur1 SINE Alu 2 130 -19 7 912 486 0 0 0 chr17 42958211 42958265 -52314386 + (GAAA)n Simple_repeat Simple_repeat 3 56 0 7 912 747 62 0 0 chr17 42958265 42958361 -52314290 + (GGGA)n Simple_repeat Simple_repeat 4 100 0 7 912 968 106 24 0 chr17 42958363 42958533 -52314118 + (GAGAA)n Simple_repeat Simple_repeat 3 176 0 7 912 562 239 49 55 chr17 42958546 42958710 -52313941 + B3 SINE B2 42 204 -12 7 912 334 267 50 118 chr17 42958834 42958897 -52313754 - PB1D10 SINE Alu -6 111 49 7 912 1115 62 0 7 chr17 42958897 42959044 -52313607 - B1_Mus2 SINE Alu 0 147 2 7 912 334 267 50 118 chr17 42959044 42959099 -52313552 - PB1D10 SINE Alu -69 48 1 7 912 23 0 0 0 chr17 42959425 42959448 -52313203 + AT_rich Low_complexity Low_complexity 1 23 0 7 912 297 182 37 49 chr17 42959648 42959729 -52312922 + Lx8 LINE L1 6694 6773 -700 7 912 861 247 57 32 chr17 42959809 42960089 -52312562 + Lx8 LINE L1 6899 7185 -288 7 912 21 36 0 0 chr17 42960372 42960400 -52312251 + AT_rich Low_complexity Low_complexity 1 28 0 7 912 1149 72 108 0 chr17 42961091 42961257 -52311394 + B2_Mm1t SINE B2 1 184 -9 7 912 180 0 0 0 chr17 42961563 42961583 -52311068 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 912 221 169 292 14 chr17 42961833 42961905 -52310746 + B1F1 SINE Alu 58 149 0 7 912 651 267 6 24 chr17 42962084 42962249 -52310402 + RSINE1 SINE B4 4 165 0 7 912 981 244 14 0 chr17 42962373 42962582 -52310069 - B3 SINE B2 -4 212 1 7 912 2232 125 154 3 chr17 42963397 42963774 -52308877 - RLTR9B LTR ERVK 0 437 4 7 912 1169 199 5 0 chr17 42963774 42963980 -52308671 + B3 SINE B2 4 210 -6 7 912 251 333 133 25 chr17 42964005 42964125 -52308526 - B3 SINE B2 0 216 84 7 912 1026 201 75 0 chr17 42964125 42964324 -52308327 - B3 SINE B2 -2 214 1 7 912 730 248 0 7 chr17 42965219 42965369 -52307282 - B1_Mur1 SINE Alu 0 149 1 7 912 611 282 55 35 chr17 42965624 42965826 -52306825 + B3 SINE B2 10 215 -1 7 912 864 109 50 7 chr17 42966073 42966212 -52306439 + B1_Mus1 SINE Alu 1 145 -3 7 912 21 36 0 0 chr17 42966302 42966330 -52306321 + AT_rich Low_complexity Low_complexity 1 28 0 7 912 460 210 250 19 chr17 42966702 42966862 -52305789 + MTD LTR MaLR 223 419 0 7 912 270 186 143 8 chr17 42967606 42967728 -52304923 - L1MEc LINE L1 -4026 2374 2236 7 912 1176 22 0 0 chr17 42967955 42968090 -52304561 + B1_Mm SINE Alu 1 135 -12 7 912 217 255 0 0 chr17 42968783 42968834 -52303817 + L2c LINE L2 3315 3365 -22 7 912 1349 87 11 0 chr17 42969191 42969374 -52303277 - B2_Mm1t SINE B2 -8 185 1 7 912 320 94 56 19 chr17 42969947 42970001 -52302650 + ORR1B2 LTR MaLR 1 56 -338 7 912 347 131 0 76 chr17 42970003 42970069 -52302582 + ORR1B2 LTR MaLR 299 359 -8 7 912 320 338 45 19 chr17 42970072 42970229 -52302422 + MER2B DNA MER2_type 173 333 -3 7 912 567 221 19 19 chr17 42970656 42970762 -52301889 + PB1D7 SINE Alu 13 118 -2 7 912 446 264 35 43 chr17 42971731 42971830 -52300821 + RSINE1 SINE B4 46 144 -21 7 912 333 0 0 0 chr17 42971830 42971867 -52300784 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 912 446 264 35 43 chr17 42971867 42971882 -52300769 + RSINE1 SINE B4 145 159 -6 7 912 23 78 0 0 chr17 42972016 42972067 -52300584 + AT_rich Low_complexity Low_complexity 1 51 0 7 912 520 261 141 16 chr17 42972139 42972207 -52300444 - B3 SINE B2 0 216 140 7 912 180 0 0 0 chr17 42972207 42972227 -52300424 + (CCCCCA)n Simple_repeat Simple_repeat 4 23 0 7 912 520 261 141 16 chr17 42972227 42972349 -52300302 - B3 SINE B2 -77 139 3 7 912 489 243 80 45 chr17 42972678 42972790 -52299861 - B1_Mur4 SINE Alu -21 129 14 7 912 243 326 61 10 chr17 42972988 42973006 -52299645 + B4 SINE B4 68 90 -202 7 912 506 261 35 0 chr17 42973006 42973121 -52299530 + PB1D9 SINE Alu 2 120 0 7 912 397 293 64 7 chr17 42973436 42973577 -52299074 + B1F SINE Alu 1 149 0 7 912 355 321 45 0 chr17 42973776 42973888 -52298763 + PB1D10 SINE Alu 1 117 0 7 912 419 259 46 0 chr17 42973915 42974023 -52298628 + PB1D10 SINE Alu 1 113 -4 7 912 650 286 186 20 chr17 42974478 42974774 -52297877 + MLT1G LTR MaLR 247 591 0 7 912 200 308 89 37 chr17 42974785 42974920 -52297731 + MIRb SINE MIR 119 260 -8 7 912 385 316 44 7 chr17 42975306 42975443 -52297208 - RSINE1 SINE B4 -2 163 22 7 912 215 245 0 20 chr17 42976166 42976216 -52296435 + GA-rich Low_complexity Low_complexity 3 51 0 7 912 1124 252 171 3 chr17 42977773 42978083 -52294568 + ORR1D2 LTR MaLR 1 362 -8 7 912 1433 53 21 5 chr17 42978383 42978572 -52294079 + B2_Mm2 SINE B2 2 193 -2 7 912 764 181 0 6 chr17 42979145 42979317 -52293334 + (TAGG)n Simple_repeat Simple_repeat 1 171 0 7 912 1167 62 0 7 chr17 42979444 42979591 -52293060 + B1_Mm SINE Alu 1 146 -1 7 912 450 0 0 0 chr17 42979695 42979745 -52292906 + (TTTTG)n Simple_repeat Simple_repeat 3 52 0 7 912 1116 44 7 0 chr17 42979745 42979881 -52292770 - B1_Mur3 SINE Alu -12 137 1 7 912 3597 194 45 15 chr17 42979971 42980713 -52291938 + Lx9 LINE L1 6723 7486 -158 7 912 898 63 8 0 chr17 42980760 42980903 -52291748 + L1_Mus2 LINE L1 6427 6566 0 7 912 1141 55 0 7 chr17 42980903 42981049 -52291602 + B1_Mm SINE Alu 2 146 -1 7 912 350 71 0 51 chr17 42981049 42981093 -52291558 + (A)n Simple_repeat Simple_repeat 1 42 0 7 912 416 146 35 26 chr17 42981093 42981206 -52291445 + Lx9 LINE L1 7530 7643 -1 7 912 220 313 126 30 chr17 42981231 42981366 -52291285 + RSINE1 SINE B4 8 155 -10 7 912 21 0 0 0 chr17 42981372 42981393 -52291258 + AT_rich Low_complexity Low_complexity 1 21 0 7 912 837 125 0 0 chr17 42981454 42981582 -52291069 + B2_Mm2 SINE B2 2 129 -66 7 912 448 111 22 0 chr17 42981587 42981677 -52290974 + (TA)n Simple_repeat Simple_repeat 2 93 0 7 912 1110 36 14 7 chr17 42981696 42981836 -52290815 + B1_Mm SINE Alu 1 141 -6 7 912 186 156 0 0 chr17 42981837 42981882 -52290769 + A-rich Low_complexity Low_complexity 1 45 0 7 912 296 342 9 18 chr17 42982518 42982631 -52290020 - B1F SINE Alu -31 118 7 7 912 307 293 47 25 chr17 42982847 42982980 -52289671 - MER58B DNA MER1_type 0 341 202 7 912 327 263 175 63 chr17 42983023 42983149 -52289502 + ID_B1 SINE B4 81 220 -4 7 912 707 167 80 0 chr17 42983356 42983494 -52289157 + B1_Mur4 SINE Alu 2 150 0 7 912 504 250 0 0 chr17 42983758 42983862 -52288789 + RSINE1 SINE B4 1 104 -61 7 912 903 118 7 7 chr17 42984019 42984156 -52288495 + B2_Mm1t SINE B2 2 138 -55 7 912 331 276 109 63 chr17 42985435 42985609 -52287042 + B2_Mm1a SINE B2 2 183 -10 7 912 271 241 0 0 chr17 42985795 42985849 -52286802 + MER66-int LTR ERV1 2516 2569 -4107 8 912 596 202 53 0 chr17 42986646 42986760 -52285891 + B1_Mus1 SINE Alu 29 148 0 8 912 390 204 58 58 chr17 42986771 42986891 -52285760 + PB1D9 SINE Alu 1 120 0 8 912 186 43 0 0 chr17 42987147 42987170 -52285481 + (CA)n Simple_repeat Simple_repeat 2 24 0 8 912 783 274 99 35 chr17 42987273 42987648 -52285003 + L1MC LINE L1 5256 5654 -679 8 912 348 281 154 22 chr17 42987644 42987826 -52284825 + L1MC LINE L1 5550 5755 -578 8 912 267 73 36 18 chr17 42987915 42987971 -52284680 + (CAAAAA)n Simple_repeat Simple_repeat 2 58 0 8 912 1224 93 49 0 chr17 42988005 42988163 -52284488 + B2_Mm1t SINE B2 2 160 -33 8 912 207 0 0 0 chr17 42988163 42988186 -52284465 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 8 912 1224 93 49 0 chr17 42988186 42988210 -52284441 + B2_Mm1t SINE B2 161 192 -1 8 912 340 235 22 45 chr17 42988218 42988307 -52284344 + B3 SINE B2 14 100 -116 8 912 319 213 16 0 chr17 42988289 42988350 -52284301 - B1_Mur3 SINE Alu -86 63 2 8 912 302 289 11 43 chr17 42988350 42988375 -52284276 - B4A SINE B4 -137 136 65 8 912 30 0 0 0 chr17 42988375 42988405 -52284246 + AT_rich Low_complexity Low_complexity 1 30 0 8 912 231 194 0 46 chr17 42988866 42988879 -52283772 + polypurine Low_complexity Low_complexity 4 16 0 8 912 495 221 164 0 chr17 42988879 42989001 -52283650 + B1_Mur2 SINE Alu 1 142 -7 8 912 231 194 0 46 chr17 42989001 42989052 -52283599 + GA-rich Low_complexity Low_complexity 17 64 0 8 912 447 350 115 106 chr17 42989728 42989918 -52282733 + MLT1F2 LTR MaLR 17 187 -373 8 912 1224 48 0 0 chr17 42989918 42990065 -52282586 - B1_Mm SINE Alu 0 147 1 8 912 447 350 115 106 chr17 42990065 42990354 -52282297 + MLT1F2 LTR MaLR 188 500 -60 8 912 618 243 72 62 chr17 42990359 42990552 -52282099 - B3A SINE B2 -3 195 1 8 912 1149 57 0 0 chr17 42990718 42990859 -52281792 + B1_Mus2 SINE Alu 1 141 -6 8 912 275 330 26 18 chr17 42991384 42991498 -52281153 + PB1D7 SINE Alu 4 118 -2 8 913 1186 61 0 0 chr17 42991664 42991811 -52280840 - B1_Mus2 SINE Alu 0 147 1 8 913 414 264 97 37 chr17 42992065 42992199 -52280452 + B1_Mur2 SINE Alu 1 142 -7 8 913 236 221 101 148 chr17 42992421 42992570 -52280081 - RLTR13A LTR ERVK -367 488 347 8 913 477 287 51 7 chr17 42992491 42992628 -52280023 - ID_B1 SINE B4 -1 223 81 8 913 464 255 144 75 chr17 42992661 42992835 -52279816 - B3A SINE B2 -12 186 1 8 913 599 0 0 14 chr17 42993099 42993171 -52279480 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 8 913 666 0 0 0 chr17 42993171 42993245 -52279406 + (GGGA)n Simple_repeat Simple_repeat 3 76 0 8 913 423 111 29 48 chr17 42993330 42993354 -52279297 + RMER17B LTR ERVK 366 386 -572 8 913 369 0 0 0 chr17 42993354 42993395 -52279256 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 913 423 111 29 48 chr17 42993395 42993474 -52279177 + RMER17B LTR ERVK 387 467 -491 8 913 210 128 0 0 chr17 42993544 42993583 -52279068 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 913 238 274 0 0 chr17 42993712 42993774 -52278877 + MER46C DNA MER2_type 276 337 -1 8 913 453 225 73 32 chr17 42993902 42994026 -52278625 + B1F2 SINE Alu 9 137 -12 8 913 582 140 10 0 chr17 42994340 42994440 -52278211 - URR1B DNA MER1_type 0 225 125 8 913 342 0 0 0 chr17 42994606 42994644 -52278007 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 913 420 237 199 0 chr17 42994693 42994824 -52277827 + Lx8 LINE L1 7173 7329 -144 8 913 1268 87 12 0 chr17 42994939 42995112 -52277539 + B2_Mm1t SINE B2 1 175 -18 8 913 1233 35 0 0 chr17 42995113 42995258 -52277393 + B1_Mm SINE Alu 2 146 -1 8 913 22 0 0 0 chr17 42995258 42995280 -52277371 + AT_rich Low_complexity Low_complexity 1 22 0 8 913 345 120 0 30 chr17 42995331 42995439 -52277212 + B2_Mm2 SINE B2 47 187 -8 8 913 759 130 137 0 chr17 42995604 42995735 -52276916 + B1_Mur4 SINE Alu 1 149 -1 8 913 215 261 0 30 chr17 42995737 42995804 -52276847 + GA-rich Low_complexity Low_complexity 2 66 0 8 913 230 234 0 21 chr17 42995755 42995803 -52276848 + polypurine Low_complexity Low_complexity 2 48 0 8 913 1356 100 5 0 chr17 42995813 42996003 -52276648 + B2_Mm1t SINE B2 1 191 -2 8 913 232 132 18 333 chr17 42996067 42996114 -52276537 + B3A SINE B2 2 79 -119 8 913 317 224 45 0 chr17 42996114 42996181 -52276470 + RSINE1 SINE B4 11 80 -85 8 913 387 287 234 27 chr17 42996322 42996655 -52275996 + L1MCb LINE L1 561 962 -5083 8 913 424 244 176 0 chr17 42996792 42996911 -52275740 - B1F SINE Alu -9 140 1 8 913 316 232 43 14 chr17 42997039 42997109 -52275542 - ID4_ SINE ID -10 73 2 8 913 287 239 93 133 chr17 42997116 42997158 -52275493 + MT2B LTR ERVL 134 169 -432 8 913 603 125 130 26 chr17 42997158 42997273 -52275378 + B1_Mur3 SINE Alu 2 128 -21 8 913 248 226 144 8 chr17 42997487 42997612 -52275039 - ORR1E LTR MaLR -211 148 7 8 913 380 250 48 29 chr17 42997978 42998081 -52274570 - PB1D7 SINE Alu -15 105 1 8 913 1972 144 51 51 chr17 42998244 42998617 -52274034 + ORR1C1 LTR MaLR 6 378 0 8 913 1152 54 0 39 chr17 42999138 42999291 -52273360 - B1_Mm SINE Alu 0 147 1 8 913 1228 80 85 0 chr17 42999376 42999552 -52273099 - B2_Mm2 SINE B2 -3 192 2 8 913 521 124 98 23 chr17 42999554 42999686 -52272965 - L1_Mus3 LINE L1 -3 6635 6494 8 913 196 316 101 10 chr17 42999901 43000000 -52272651 - L2a LINE L2 -5 3421 3314 8 913 452 275 0 56 chr17 43000354 43000462 -52272189 + RSINE1 SINE B4 2 103 -62 1 913 1192 68 0 0 chr17 43000464 43000611 -52272040 + B1_Mus1 SINE Alu 2 148 0 2 913 389 247 0 0 chr17 43000907 43000984 -52271667 - ID_B1 SINE B4 -52 172 96 3 913 270 73 0 0 chr17 43001219 43001260 -52271391 + (A)n Simple_repeat Simple_repeat 1 41 0 4 913 354 231 211 9 chr17 43001316 43001425 -52271226 + B1F SINE Alu 13 143 -6 5 913 381 322 35 14 chr17 43001771 43001892 -52270759 - B1F2 SINE Alu 0 117 6 6 913 542 212 28 42 chr17 43001929 43002072 -52270579 + B1F2 SINE Alu 2 142 -7 7 913 306 180 0 0 chr17 43002094 43002155 -52270496 + (TGGA)n Simple_repeat Simple_repeat 4 64 0 8 913 311 229 42 26 chr17 43002187 43002294 -52270357 + PB1D10 SINE Alu 10 115 -34 9 913 1946 118 49 0 chr17 43002379 43002683 -52269968 + ORR1A2 LTR MaLR 1 319 -8 1 913 2978 96 221 4 chr17 43002714 43003194 -52269457 + MT2B2 LTR ERVL 1 584 0 1 913 1332 95 5 26 chr17 43003230 43003424 -52269227 - B2_Mm1t SINE B2 -3 190 1 1 913 1336 278 79 42 chr17 43003446 43003950 -52268701 + RCHARR1 DNA MER1_type 4 526 -448 1 913 697 167 76 42 chr17 43003961 43004105 -52268546 + B1_Mur3 SINE Alu 1 149 0 1 913 309 151 0 0 chr17 43004105 43004158 -52268493 + A-rich Low_complexity Low_complexity 1 53 0 1 913 511 194 89 0 chr17 43004160 43004284 -52268367 + RCHARR1 DNA MER1_type 518 652 -322 1 913 816 193 226 29 chr17 43004488 43004803 -52267848 - RMER10A LTR ERVL -10 388 1 1 913 310 250 135 16 chr17 43004804 43004851 -52267800 + RCHARR1 DNA MER1_type 697 744 -230 1 913 1036 210 39 10 chr17 43004851 43005058 -52267593 + B3 SINE B2 1 213 -3 1 913 310 250 135 16 chr17 43005058 43005136 -52267515 + RCHARR1 DNA MER1_type 745 837 -137 1 913 397 250 47 81 chr17 43005160 43005308 -52267343 - B1_Mus2 SINE Alu -5 144 2 1 913 1134 70 28 0 chr17 43005343 43005486 -52267165 - B1_Mus2 SINE Alu 0 147 1 1 913 1430 239 80 33 chr17 43005715 43005875 -52266776 - MTD LTR MaLR -12 407 228 2 913 1580 52 0 5 chr17 43005875 43006068 -52266583 - B2_Mm2 SINE B2 0 195 4 2 913 1430 239 80 33 chr17 43006068 43006296 -52266355 - MTD LTR MaLR -192 227 2 2 913 274 182 72 0 chr17 43006381 43006465 -52266186 + MTEb LTR MaLR 278 367 -12 2 913 245 231 0 0 chr17 43007109 43007161 -52265490 + PB1 SINE Alu 68 119 -8 2 913 477 0 0 0 chr17 43007451 43007504 -52265147 + (GGGGA)n Simple_repeat Simple_repeat 3 55 0 2 913 561 226 0 14 chr17 43008149 43008288 -52264363 + B1F1 SINE Alu 1 137 -12 2 913 462 18 0 0 chr17 43008288 43008343 -52264308 + (GA)n Simple_repeat Simple_repeat 2 56 0 2 913 348 299 75 61 chr17 43008722 43009000 -52263651 + B4A SINE B4 1 282 -10 2 913 1237 21 7 0 chr17 43009023 43009168 -52263483 + B1_Mm SINE Alu 2 147 0 2 913 195 69 0 0 chr17 43009171 43009200 -52263451 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 913 241 106 21 0 chr17 43009317 43009364 -52263287 + L1MC4a LINE L1 6599 6646 -1236 3 913 357 178 255 93 chr17 43009426 43009587 -52263064 + B2_Mm2 SINE B2 2 188 -7 3 913 1487 65 11 0 chr17 43009714 43009900 -52262751 + B2_Mm1t SINE B2 1 188 -5 3 913 289 256 219 0 chr17 43010142 43010302 -52262349 - MIR SINE MIR -40 222 28 3 913 310 327 37 9 chr17 43010302 43010410 -52262241 - ID_B1 SINE B4 -1 223 113 3 913 252 0 0 0 chr17 43010603 43010631 -52262020 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 913 277 184 11 126 chr17 43010801 43010888 -52261763 + MT2B LTR ERVL 175 251 -350 3 913 473 242 0 29 chr17 43010811 43010913 -52261738 + PB1D7 SINE Alu 22 120 0 3 913 977 83 13 40 chr17 43011216 43011367 -52261284 + B1_Mus1 SINE Alu 2 148 0 3 913 627 230 56 0 chr17 43011386 43011512 -52261139 + B1_Mur2 SINE Alu 1 133 -16 3 913 270 109 15 45 chr17 43011513 43011580 -52261071 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 4 913 302 274 75 43 chr17 43011862 43012049 -52260602 + Tigger15a DNA TcMar 492 684 -31 4 913 429 54 0 0 chr17 43012949 43013005 -52259646 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 913 213 132 0 0 chr17 43013861 43013899 -52258752 + (T)n Simple_repeat Simple_repeat 1 38 0 4 913 184 296 43 43 chr17 43014485 43014577 -52258074 + MIRb SINE MIR 39 130 -138 4 913 697 249 62 16 chr17 43015159 43015351 -52257300 - B3 SINE B2 -1 215 15 4 913 342 0 0 0 chr17 43015402 43015440 -52257211 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 913 329 273 91 83 chr17 43015653 43015801 -52256850 + RMER17C LTR ERVK 1 131 -279 4 913 339 44 0 0 chr17 43015801 43015846 -52256805 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 4 913 198 71 0 0 chr17 43015849 43015877 -52256774 + (TCTCTG)n Simple_repeat Simple_repeat 2 29 0 4 913 329 273 91 83 chr17 43015877 43016087 -52256564 + RMER17C LTR ERVK 132 364 -46 4 913 269 232 72 0 chr17 43016574 43016643 -52256008 + BC1_Mm scRNA scRNA 6 79 -73 5 913 372 260 39 0 chr17 43016862 43016966 -52255685 - PB1D7 SINE Alu -3 117 10 5 913 264 233 244 0 chr17 43016997 43017023 -52255628 - B1_Mus2 SINE Alu -7 113 7 5 913 259 297 12 75 chr17 43017023 43017083 -52255568 - B4A SINE B4 -140 152 97 5 913 3457 35 2 0 chr17 43017083 43017478 -52255173 + MTA_Mm LTR MaLR 1 396 0 5 913 259 297 12 75 chr17 43017478 43017497 -52255154 - B4A SINE B4 -196 96 78 5 913 547 231 0 0 chr17 43017777 43017885 -52254766 - B1_Mur2 SINE Alu -11 138 31 5 913 257 286 73 68 chr17 43018005 43018196 -52254455 - Lx8 LINE L1 -1477 5996 5805 5 913 301 132 14 42 chr17 43018252 43018323 -52254328 + (TA)n Simple_repeat Simple_repeat 2 70 0 5 913 361 318 24 67 chr17 43018334 43018397 -52254254 - L1M2 LINE L1 -507 5793 5733 5 913 1466 83 16 0 chr17 43018397 43018589 -52254062 - B2_Mm2 SINE B2 0 195 1 5 913 361 318 24 67 chr17 43018589 43018822 -52253829 - L1M2 LINE L1 -568 5732 5510 5 913 479 259 20 54 chr17 43018851 43018998 -52253653 - B1_Mur1 SINE Alu -1 148 7 6 913 409 242 24 40 chr17 43019031 43019156 -52253495 - ID_B1 SINE B4 -3 221 99 6 913 477 259 19 14 chr17 43019171 43019359 -52253292 - L1M2 LINE L1 -696 5468 5281 5 913 1012 103 118 24 chr17 43019420 43019438 -52253213 - B2_Mm1t SINE B2 -8 185 168 6 913 432 0 0 0 chr17 43019438 43019486 -52253165 + (TA)n Simple_repeat Simple_repeat 1 48 0 6 913 1012 103 118 24 chr17 43019486 43019636 -52253015 - B2_Mm1t SINE B2 -26 167 2 6 913 241 231 117 63 chr17 43019717 43019828 -52252823 + ID_B1 SINE B4 99 215 -9 6 913 324 0 0 0 chr17 43020234 43020270 -52252381 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 913 868 222 135 33 chr17 43020700 43020975 -52251676 - MTD LTR MaLR -14 405 111 6 913 807 201 0 7 chr17 43020977 43021122 -52251529 + B1_Mur1 SINE Alu 5 148 -1 6 913 1145 55 7 7 chr17 43021127 43021274 -52251377 + B1_Mus1 SINE Alu 2 148 0 6 913 203 103 0 25 chr17 43021325 43021365 -52251286 + (GGAA)n Simple_repeat Simple_repeat 4 42 0 6 913 354 245 63 11 chr17 43021367 43021462 -52251189 - MTD LTR MaLR -301 118 19 6 913 524 77 632 0 chr17 43021722 43021839 -52250812 - B2_Mm2 SINE B2 -3 192 2 7 913 441 0 0 0 chr17 43022581 43022630 -52250021 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 7 913 400 240 190 49 chr17 43022633 43022742 -52249909 + ID_B1 SINE B4 14 223 -1 7 913 432 133 13 0 chr17 43022742 43022817 -52249834 + B1F SINE Alu 74 149 0 7 913 230 261 0 0 chr17 43022829 43022875 -52249776 + B3A SINE B2 11 56 -142 7 913 2095 141 13 13 chr17 43023127 43023515 -52249136 - MTB_Mm-int LTR MaLR -869 389 2 7 913 1510 165 168 110 chr17 43023517 43023834 -52248817 - MTB_Mm LTR MaLR -3 404 65 7 913 1153 42 21 0 chr17 43023834 43023976 -52248675 - B1_Mus1 SINE Alu -2 146 2 7 913 1510 165 168 110 chr17 43023976 43024040 -52248611 - MTB_Mm LTR MaLR -343 64 1 7 913 23 0 0 0 chr17 43024127 43024150 -52248501 + AT_rich Low_complexity Low_complexity 1 23 0 7 913 638 73 21 0 chr17 43024695 43024791 -52247860 + (TTTC)n Simple_repeat Simple_repeat 1 98 0 7 913 260 87 65 0 chr17 43024800 43024846 -52247805 + T-rich Low_complexity Low_complexity 2 50 0 7 913 1029 110 0 6 chr17 43024846 43025002 -52247649 - ORR1A2 LTR MaLR -50 277 123 8 913 555 307 22 16 chr17 43025138 43025320 -52247331 + B3A SINE B2 1 183 -15 8 913 654 122 0 0 chr17 43025477 43025584 -52247067 + (TG)n Simple_repeat Simple_repeat 2 108 0 8 913 435 158 24 12 chr17 43025586 43025669 -52246982 - RSINE1 SINE B4 -23 142 59 8 913 341 321 107 31 chr17 43025690 43025897 -52246754 + LTR33A_ LTR ERVL 218 442 -89 8 913 1152 63 0 0 chr17 43025897 43026039 -52246612 - B1_Mus2 SINE Alu -4 143 2 8 913 341 321 107 31 chr17 43026039 43026120 -52246531 + LTR33A_ LTR ERVL 443 528 -3 8 913 516 268 7 21 chr17 43026217 43026362 -52246289 + ID_B1 SINE B4 82 224 0 8 913 209 119 24 0 chr17 43026437 43026479 -52246172 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 913 307 389 0 9 chr17 43026496 43026610 -52246041 - B4A SINE B4 0 292 180 8 913 867 160 98 64 chr17 43026628 43026851 -52245800 + BGLII_B LTR ERVK 1 231 -210 8 913 3303 100 42 75 chr17 43026851 43027476 -52245175 + RLTR6_Mm LTR ERV1 1 604 -50 9 913 6652 21 46 17 chr17 43027477 43028283 -52244368 + RLTR6-int LTR ERV1 1 829 -6949 9 913 281 96 19 0 chr17 43028309 43028361 -52244290 + MMVL30-int LTR ERV1 325 377 -2922 9 913 24510 30 23 14 chr17 43028709 43031610 -52241041 + MMVL30-int LTR ERV1 772 3698 0 9 913 3167 100 43 78 chr17 43031610 43032215 -52240436 + RLTR6_Mm LTR ERV1 1 584 -70 9 913 579 189 154 19 chr17 43032215 43032371 -52240280 + BGLII_B LTR ERVK 229 405 -36 8 913 1157 62 7 0 chr17 43032392 43032537 -52240114 - B1_Mus2 SINE Alu 0 147 2 9 913 22 0 0 0 chr17 43032542 43032564 -52240087 + AT_rich Low_complexity Low_complexity 1 22 0 9 913 5681 115 46 62 chr17 43032700 43033800 -52238851 - RLTR25A LTR ERVK -4 1099 17 9 913 246 254 119 0 chr17 43033802 43033869 -52238782 - B4A SINE B4 -216 76 2 9 913 594 128 0 0 chr17 43034052 43034146 -52238505 + (TTTC)n Simple_repeat Simple_repeat 1 94 0 9 913 614 206 113 15 chr17 43034156 43034289 -52238362 + B1_Mus1 SINE Alu 2 147 -1 9 913 558 14 0 0 chr17 43034298 43034369 -52238282 + B1_Mur4 SINE Alu 78 148 -2 9 913 207 0 0 0 chr17 43034405 43034428 -52238223 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9 913 788 178 6 70 chr17 43034485 43034642 -52238009 - B1_Mur3 SINE Alu 0 149 3 1 913 31 0 0 0 chr17 43034660 43034691 -52237960 + AT_rich Low_complexity Low_complexity 1 31 0 1 913 1255 21 7 0 chr17 43034691 43034836 -52237815 - B1_Mm SINE Alu 0 147 2 1 913 672 13 0 0 chr17 43034855 43034932 -52237719 + (TC)n Simple_repeat Simple_repeat 2 78 0 1 913 530 282 53 0 chr17 43034945 43035076 -52237575 - B3A SINE B2 -60 138 1 1 913 304 233 20 109 chr17 43035082 43035183 -52237468 - B3A SINE B2 -21 195 104 1 913 1216 68 63 63 chr17 43035422 43035580 -52237071 + B2_Mm2 SINE B2 1 164 -31 1 913 1169 68 0 0 chr17 43035580 43035727 -52236924 + B1_Mus2 SINE Alu 1 147 0 1 913 1216 68 63 63 chr17 43035727 43035757 -52236894 + B2_Mm2 SINE B2 165 189 -6 1 913 3521 68 25 2 chr17 43035829 43036318 -52236333 - RLTR1B LTR ERV1 -12 500 1 1 913 829 140 72 22 chr17 43036401 43036540 -52236111 - B1_Mus1 SINE Alu 0 148 3 1 913 573 15 0 0 chr17 43036635 43036701 -52235950 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 913 690 242 55 16 chr17 43036707 43036905 -52235746 + B3A SINE B2 6 210 -6 1 913 1869 115 99 176 chr17 43037300 43037766 -52234885 - RLTR23 LTR ERV1 0 430 1 1 913 184 30 61 0 chr17 43037813 43037846 -52234805 + (TGG)n Simple_repeat Simple_repeat 2 36 0 1 913 427 212 0 12 chr17 43037908 43037994 -52234657 - B1F SINE Alu -63 86 2 1 913 198 0 0 0 chr17 43038130 43038152 -52234499 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 913 963 105 0 0 chr17 43038294 43038437 -52234214 + B1_Mus2 SINE Alu 5 147 0 1 913 479 332 116 12 chr17 43038648 43038889 -52233762 + B4A SINE B4 9 274 -18 1 913 373 252 87 24 chr17 43039006 43039132 -52233519 + RSINE1 SINE B4 32 165 0 1 913 2141 115 13 148 chr17 43039163 43039622 -52233029 - RMER10B LTR ERVL -1 397 1 1 913 1185 48 7 0 chr17 43039820 43039966 -52232685 - B1_Mm SINE Alu 0 147 1 1 913 246 297 132 47 chr17 43040122 43040228 -52232423 - B1F1 SINE Alu -27 122 8 1 913 70 90 0 0 chr17 43040268 43040457 -52232194 + AT_rich Low_complexity Low_complexity 1 189 0 1 913 286 308 18 55 chr17 43040794 43040904 -52231747 - B4A SINE B4 -144 148 43 1 913 286 250 0 0 chr17 43042192 43042260 -52230391 + PB1D10 SINE Alu 24 91 -26 1 913 426 193 0 43 chr17 43042266 43042358 -52230293 - B1_Mus2 SINE Alu -23 124 37 1 913 1092 157 36 5 chr17 43042469 43042661 -52229990 - RMER6A LTR ERVK 0 756 559 1 913 342 0 0 0 chr17 43042678 43042716 -52229935 + (GAA)n Simple_repeat Simple_repeat 2 39 0 1 913 1019 142 6 0 chr17 43042716 43042892 -52229759 + (GGA)n Simple_repeat Simple_repeat 2 178 0 1 913 3206 147 44 30 chr17 43042944 43043303 -52229348 - RLTR17 LTR ERVK -84 608 242 1 913 207 0 0 0 chr17 43043303 43043326 -52229325 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 913 1118 89 0 0 chr17 43043326 43043472 -52229179 - B1_Mus1 SINE Alu -2 146 1 1 913 3206 147 44 30 chr17 43043472 43043707 -52228944 - RLTR17 LTR ERVK -451 241 6 1 913 461 74 253 0 chr17 43043702 43043797 -52228854 - RMER6A LTR ERVK -102 588 470 1 913 1171 101 177 9 chr17 43043791 43044011 -52228640 - RMER6A LTR ERVK -443 313 57 1 913 952 174 7 0 chr17 43044223 43044372 -52228279 - B1_Mur4 SINE Alu 0 150 1 1 913 258 32 0 0 chr17 43044599 43044630 -52228021 + (T)n Simple_repeat Simple_repeat 1 31 0 1 913 1207 34 7 0 chr17 43044630 43044776 -52227875 - B1_Mus2 SINE Alu 0 147 1 1 913 827 207 0 7 chr17 43044778 43044924 -52227727 - B1_Mur1 SINE Alu 0 149 5 1 913 291 304 30 60 chr17 43045009 43045022 -52227629 - MTD LTR MaLR -194 185 173 1 913 1182 48 0 0 chr17 43045022 43045168 -52227483 + B1_Mus2 SINE Alu 1 146 -1 1 913 321 26 0 0 chr17 43045168 43045206 -52227445 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 1 913 894 220 10 29 chr17 43045206 43045412 -52227239 - MTD LTR MaLR -213 206 5 1 913 294 294 22 0 chr17 43045444 43045536 -52227115 - ID_B1 SINE B4 -21 203 110 1 913 627 81 0 0 chr17 43046344 43046430 -52226221 + (TGGGGG)n Simple_repeat Simple_repeat 4 89 0 1 913 400 274 35 77 chr17 43046588 43046758 -52225893 + RSINE1 SINE B4 1 163 -2 1 913 273 260 27 27 chr17 43046818 43046893 -52225758 + ID_B1 SINE B4 90 168 -124 1 913 320 288 53 26 chr17 43047280 43047394 -52225257 - B1F2 SINE Alu -32 117 1 1 913 1578 166 6 217 chr17 43047518 43047713 -52224938 + MTB_Mm LTR MaLR 1 189 -218 1 913 948 215 48 10 chr17 43047713 43047920 -52224731 + B3 SINE B2 2 216 0 1 913 1578 166 6 217 chr17 43047920 43048240 -52224411 + MTB_Mm LTR MaLR 190 407 0 1 913 402 206 96 19 chr17 43048830 43048934 -52223717 + PB1D9 SINE Alu 9 120 0 1 913 255 280 666 0 chr17 43049367 43049496 -52223155 + ID_B1 SINE B4 2 216 -8 1 913 35 0 0 0 chr17 43049605 43049640 -52223011 + AT_rich Low_complexity Low_complexity 1 35 0 1 913 226 269 41 41 chr17 43049642 43049739 -52222912 - RSINE1 SINE B4 0 165 69 1 913 671 278 105 47 chr17 43049731 43050094 -52222557 - MTD LTR MaLR -15 385 13 1 913 792 186 129 31 chr17 43050359 43050553 -52222098 - B3 SINE B2 0 216 4 1 913 365 282 95 16 chr17 43050561 43050687 -52221964 - B1_Mur1 SINE Alu -2 147 12 1 913 515 184 34 34 chr17 43050766 43050777 -52221874 - PB1D9 SINE Alu 0 120 110 1 913 699 218 35 0 chr17 43050777 43050919 -52221732 - B1_Mur1 SINE Alu 0 149 3 1 913 515 184 34 34 chr17 43050919 43051025 -52221626 - PB1D9 SINE Alu -11 109 3 1 913 229 26 26 26 chr17 43051029 43051068 -52221583 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 913 705 191 0 16 chr17 43051069 43051197 -52221454 - RMER1C Other Other -17 1325 1200 1 913 286 303 0 0 chr17 43051197 43051263 -52221388 + G-rich Low_complexity Low_complexity 3 68 0 1 913 2676 202 34 47 chr17 43051265 43051428 -52221223 - RMER1C Other Other -157 1185 1035 1 913 1130 66 0 0 chr17 43051428 43051565 -52221086 + B1_Mus1 SINE Alu 5 141 -7 1 913 363 60 0 0 chr17 43051566 43051616 -52221035 + (TAAA)n Simple_repeat Simple_repeat 1 50 0 1 913 2676 202 34 47 chr17 43051616 43052073 -52220578 - RMER1C Other Other -308 1034 571 1 913 631 229 8 0 chr17 43052401 43052532 -52220119 + RSINE1 SINE B4 3 134 -31 1 913 251 161 18 0 chr17 43052542 43052598 -52220053 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 913 422 266 93 63 chr17 43052838 43052904 -52219747 - MLT1A LTR MaLR -159 215 155 1 913 430 216 117 33 chr17 43052904 43053024 -52219627 - B1_Mur2 SINE Alu -15 134 5 1 913 422 266 93 63 chr17 43053024 43053162 -52219489 - MLT1A LTR MaLR -220 154 6 1 913 340 248 111 28 chr17 43053261 43053369 -52219282 + PB1D10 SINE Alu 1 117 0 1 913 203 29 88 0 chr17 43053369 43053403 -52219248 + (CAAAA)n Simple_repeat Simple_repeat 1 37 0 1 913 1034 129 0 0 chr17 43053599 43053746 -52218905 - B1_Mm SINE Alu 0 147 1 1 913 478 326 70 11 chr17 43054061 43054247 -52218404 - ID_B1 SINE B4 -27 197 1 1 913 696 175 0 68 chr17 43054287 43054434 -52218217 + B1_Mur1 SINE Alu 1 137 -12 1 913 589 238 8 8 chr17 43054434 43054565 -52218086 + B3 SINE B2 75 205 -11 1 913 1178 82 0 0 chr17 43054607 43054753 -52217898 + B1_Mus2 SINE Alu 2 147 0 1 913 540 158 61 84 chr17 43055376 43055507 -52217144 + B1_Mur4 SINE Alu 22 149 -1 1 913 436 257 73 79 chr17 43055605 43055770 -52216881 + ORR1D2 LTR MaLR 207 370 0 1 913 841 189 0 33 chr17 43056204 43056357 -52216294 - B1_Mur2 SINE Alu 0 149 2 1 913 319 201 291 63 chr17 43056367 43056382 -52216269 - B3 SINE B2 0 216 203 1 913 450 0 0 0 chr17 43056382 43056432 -52216219 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 1 913 319 201 291 63 chr17 43056432 43056591 -52216060 - B3 SINE B2 -14 202 2 1 913 199 93 47 0 chr17 43056622 43056665 -52215986 + (TTTTG)n Simple_repeat Simple_repeat 3 47 0 1 913 247 196 54 0 chr17 43056677 43056733 -52215918 - ID_B1 SINE B4 -54 170 112 1 913 643 263 30 20 chr17 43057407 43057609 -52215042 + ID_B1 SINE B4 7 210 -14 1 913 261 0 0 0 chr17 43057609 43057638 -52215013 + (TAAAA)n Simple_repeat Simple_repeat 1 29 0 1 913 548 239 15 0 chr17 43057784 43057914 -52214737 + B1F SINE Alu 10 141 -8 1 913 522 250 131 7 chr17 43058018 43058155 -52214496 + RSINE1 SINE B4 3 156 -9 1 913 817 219 29 63 chr17 43058177 43058382 -52214269 + B3A SINE B2 1 198 0 1 913 2218 171 36 19 chr17 43058604 43059015 -52213636 + MTC LTR MaLR 2 419 -2 1 913 667 217 82 29 chr17 43059461 43059632 -52213019 + B3 SINE B2 37 216 0 1 913 230 255 44 40 chr17 43059638 43059769 -52212882 + MER106B DNA MER1_type 919 1053 -6 1 913 207 0 0 0 chr17 43060222 43060245 -52212406 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 913 625 228 0 0 chr17 43060381 43060508 -52212143 + B1F SINE Alu 2 128 -21 1 913 480 265 6 95 chr17 43060518 43060697 -52211954 + RSINE1 SINE B4 3 165 0 1 913 837 150 7 20 chr17 43060756 43060892 -52211759 + B1_Mus1 SINE Alu 1 135 -13 1 913 191 36 0 35 chr17 43060892 43060921 -52211730 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 913 195 42 0 0 chr17 43060923 43060947 -52211704 + (CAAT)n Simple_repeat Simple_repeat 1 24 0 1 913 1321 76 43 5 chr17 43061067 43061253 -52211398 + B2_Mm2 SINE B2 2 194 -1 1 913 630 306 22 31 chr17 43061423 43061646 -52211005 + ID_B1 SINE B4 2 222 -2 1 913 216 98 73 0 chr17 43061648 43061689 -52210962 + A-rich Low_complexity Low_complexity 5 48 0 1 913 299 203 107 13 chr17 43062027 43062088 -52210563 - B1_Mur2 SINE Alu 0 149 82 1 913 943 130 128 15 chr17 43062088 43062284 -52210367 - URR1A DNA MER1_type -2 224 7 1 913 263 266 98 27 chr17 43062290 43062402 -52210249 - B1_Mur1 SINE Alu -28 121 2 1 913 236 291 0 140 chr17 43062402 43062452 -52210199 - B4A SINE B4 -209 83 48 1 913 237 229 0 0 chr17 43062515 43062563 -52210088 - Lx8 LINE L1 -10 7463 7416 1 913 380 274 0 0 chr17 43062648 43062732 -52209919 - B1F SINE Alu 0 149 66 2 913 294 208 0 0 chr17 43062706 43062759 -52209892 - ID_B1 SINE B4 -26 198 146 2 913 273 193 0 34 chr17 43062733 43062792 -52209859 - B1F SINE Alu -27 122 66 2 913 624 327 115 14 chr17 43062833 43063190 -52209461 - Lx8 LINE L1 -93 7380 6988 1 913 301 244 0 49 chr17 43063192 43063206 -52209445 - ID_B1 SINE B4 -65 159 82 2 913 430 147 0 0 chr17 43063206 43063274 -52209377 - B1_Mus1 SINE Alu -80 68 1 2 913 434 18 18 0 chr17 43063292 43063347 -52209304 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 2 913 405 233 11 0 chr17 43063353 43063443 -52209208 + ORR1D2 LTR MaLR 1 91 -279 2 913 250 198 42 25 chr17 43063444 43063529 -52209122 + B3A SINE B2 126 207 -9 2 913 621 210 34 0 chr17 43063530 43063649 -52209002 - B1_Mur1 SINE Alu -22 127 5 2 913 243 147 0 0 chr17 43063661 43063695 -52208956 - L1MD2 LINE L1 -5534 1013 980 2 913 606 195 8 0 chr17 43063695 43063813 -52208838 + MTD LTR MaLR 1 119 -302 2 913 201 74 0 0 chr17 43063813 43063840 -52208811 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 2 913 398 281 148 0 chr17 43063841 43063969 -52208682 - B1F2 SINE Alu 0 149 3 2 913 812 266 71 41 chr17 43063969 43064261 -52208390 + MTD LTR MaLR 103 403 -16 2 913 318 290 65 9 chr17 43064328 43064436 -52208215 - L1MD2 LINE L1 -5618 929 816 2 913 369 217 22 52 chr17 43064439 43064580 -52208071 - Lx2B LINE L1 -552 5807 5638 2 913 293 353 0 0 chr17 43064619 43064721 -52207930 - PB1D10 SINE Alu -13 104 3 2 913 1155 88 0 0 chr17 43064767 43064915 -52207736 + B1_Mus1 SINE Alu 1 148 0 2 913 308 197 0 32 chr17 43064933 43064996 -52207655 - RSINE1 SINE B4 -102 63 3 2 913 1627 218 81 11 chr17 43065033 43065414 -52207237 + MTD LTR MaLR 12 419 0 2 913 369 285 75 50 chr17 43065535 43065694 -52206957 - L1MD2 LINE L1 -6359 188 26 2 913 343 189 27 0 chr17 43065857 43065931 -52206720 + RMER1C Other Other 1267 1342 0 2 913 437 110 14 0 chr17 43066145 43066218 -52206433 + (CA)n Simple_repeat Simple_repeat 1 74 0 2 913 339 252 26 14 chr17 43066313 43066432 -52206219 + PB1 SINE Alu 7 127 0 2 913 1143 260 26 35 chr17 43066883 43067230 -52205421 + ORR1E LTR MaLR 16 359 0 2 913 228 265 0 0 chr17 43067310 43067378 -52205273 + PB1D10 SINE Alu 41 108 -9 2 913 1034 66 73 0 chr17 43067888 43068025 -52204626 + B1_Mm SINE Alu 1 147 0 2 913 21 36 0 0 chr17 43068025 43068053 -52204598 + AT_rich Low_complexity Low_complexity 1 28 0 2 913 246 32 0 0 chr17 43068114 43068145 -52204506 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 913 282 29 0 0 chr17 43068267 43068302 -52204349 + (GA)n Simple_repeat Simple_repeat 2 36 0 2 913 292 217 72 0 chr17 43068331 43068400 -52204251 - B3A SINE B2 -123 75 2 2 913 1267 14 7 0 chr17 43068554 43068698 -52203953 - B1_Mm SINE Alu -1 146 2 2 913 566 259 44 49 chr17 43069491 43069674 -52202977 + B3A SINE B2 1 182 -16 2 913 495 222 20 0 chr17 43069682 43069835 -52202816 + (CA)n Simple_repeat Simple_repeat 1 156 0 2 913 583 206 0 0 chr17 43069867 43069974 -52202677 + B1_Mur2 SINE Alu 1 107 -42 2 913 952 154 9 5 chr17 43069995 43070217 -52202434 + GA-rich Low_complexity Low_complexity 1 222 0 2 913 22 0 0 0 chr17 43070224 43070246 -52202405 + AT_rich Low_complexity Low_complexity 1 22 0 2 913 346 234 386 46 chr17 43070578 43070848 -52201803 - MTE2a LTR MaLR -17 362 1 2 913 198 0 0 0 chr17 43070890 43070912 -52201739 + (TTTTA)n Simple_repeat Simple_repeat 1 22 0 2 913 27 0 0 0 chr17 43071425 43071452 -52201199 + AT_rich Low_complexity Low_complexity 1 27 0 2 913 5143 176 48 34 chr17 43071503 43072588 -52200063 - Lx9 LINE L1 0 7644 6545 2 913 836 89 8 0 chr17 43072702 43072825 -52199826 + (TTCC)n Simple_repeat Simple_repeat 1 124 0 2 913 1125 95 0 0 chr17 43072836 43072984 -52199667 - B1_Mus1 SINE Alu 0 148 1 2 913 969 219 9 45 chr17 43073020 43073271 -52199380 - Lx9 LINE L1 -1596 6048 5807 2 913 372 94 0 0 chr17 43073290 43073343 -52199308 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 913 412 247 72 86 chr17 43073353 43073588 -52199063 - B4 SINE B4 -6 286 80 2 913 976 234 5 18 chr17 43073595 43073614 -52199037 - B3 SINE B2 0 216 201 2 913 338 0 0 23 chr17 43073614 43073657 -52198994 + (TTTTA)n Simple_repeat Simple_repeat 5 46 0 2 913 976 234 5 18 chr17 43073657 43073855 -52198796 - B3 SINE B2 -16 200 2 2 913 925 68 270 0 chr17 43073888 43074036 -52198615 + B2_Mm2 SINE B2 3 190 -5 2 913 483 326 72 66 chr17 43074036 43074208 -52198443 - B3A SINE B2 -21 195 22 2 913 248 324 68 0 chr17 43074228 43074302 -52198349 - RSINE1 SINE B4 -84 81 3 2 913 1451 69 5 16 chr17 43074370 43074562 -52198089 - B2_Mm1t SINE B2 -3 190 1 2 913 1071 43 0 0 chr17 43074929 43075067 -52197584 - B1_Mus2 SINE Alu 0 147 10 2 913 861 144 229 43 chr17 43075072 43075260 -52197391 + URR1A DNA MER1_type 1 223 -3 2 913 1324 66 55 0 chr17 43075266 43075448 -52197203 + B2_Mm1t SINE B2 2 193 0 2 913 921 72 0 0 chr17 43076094 43076233 -52196418 + (TG)n Simple_repeat Simple_repeat 2 140 0 2 913 461 233 16 55 chr17 43076238 43076365 -52196286 - B3 SINE B2 -93 123 2 2 913 21 0 0 0 chr17 43076388 43076409 -52196242 + AT_rich Low_complexity Low_complexity 1 21 0 2 913 355 288 96 29 chr17 43076737 43076873 -52195778 - ID_B1 SINE B4 0 224 80 2 913 572 241 46 52 chr17 43076887 43077088 -52195563 + B3 SINE B2 5 194 -1 2 913 512 274 95 15 chr17 43077129 43077266 -52195385 + B1_Mur1 SINE Alu 1 148 -1 2 913 367 220 202 8 chr17 43077280 43077399 -52195252 + RSINE1 SINE B4 3 144 -21 2 913 1050 70 0 77 chr17 43077432 43077587 -52195064 + B1_Mus1 SINE Alu 1 143 -5 2 913 231 100 0 0 chr17 43077591 43077631 -52195020 + B1_Mus2 SINE Alu 103 142 -5 2 913 255 75 0 0 chr17 43077635 43077675 -52194976 + B1_Mus2 SINE Alu 103 142 -5 2 913 252 91 0 22 chr17 43077679 43077724 -52194927 + B1_Mus2 SINE Alu 103 149 -1 2 913 228 250 0 0 chr17 43077819 43077863 -52194788 + RSINE1 SINE B4 111 154 -11 2 913 540 73 0 0 chr17 43077909 43077991 -52194660 + (TAA)n Simple_repeat Simple_repeat 3 84 0 2 913 261 139 0 0 chr17 43078012 43078055 -52194596 + ID2 SINE ID 2 44 -39 2 913 328 226 85 11 chr17 43078227 43078321 -52194330 + PB1D10 SINE Alu 17 117 0 2 913 308 307 0 0 chr17 43078338 43078413 -52194238 + ID4 SINE ID 1 75 -8 2 913 520 273 16 17 chr17 43078524 43078698 -52193953 + ID_B1 SINE B4 54 215 -9 2 913 695 227 30 24 chr17 43078892 43079059 -52193592 + B3A SINE B2 1 168 -30 2 913 551 206 7 99 chr17 43079351 43079502 -52193149 + B1F SINE Alu 13 149 0 2 913 445 276 0 73 chr17 43079652 43079789 -52192862 - RSINE1 SINE B4 -36 129 3 2 913 204 125 0 0 chr17 43079812 43079844 -52192807 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2 913 522 216 220 6 chr17 43079844 43080012 -52192639 - B3 SINE B2 -11 205 2 2 913 364 200 20 0 chr17 43080138 43080238 -52192413 + CT-rich Low_complexity Low_complexity 4 105 0 2 913 324 250 174 9 chr17 43080255 43080364 -52192287 - B1F2 SINE Alu -18 131 5 2 913 803 128 7 22 chr17 43080791 43080927 -52191724 + B1_Mur4 SINE Alu 6 139 -11 2 913 1187 97 6 0 chr17 43080933 43081109 -52191542 + (GAGAA)n Simple_repeat Simple_repeat 2 178 0 2 913 864 199 37 28 chr17 43081124 43081321 -52191330 + RLTR18B LTR ERVK 3 200 -416 2 913 1896 138 39 147 chr17 43081321 43081763 -52190888 - ORR1B1 LTR MaLR 0 394 1 2 913 819 286 50 148 chr17 43081763 43082087 -52190564 + RLTR18B LTR ERVK 201 471 -145 2 913 2176 107 9 55 chr17 43082087 43082432 -52190219 - ORR1A4 LTR MaLR 0 329 1 2 913 819 286 50 148 chr17 43082432 43082497 -52190154 + RLTR18B LTR ERVK 472 532 -84 2 913 2522 61 59 31 chr17 43082497 43082852 -52189799 - RLTR10B2 LTR ERVK 0 365 1 2 913 819 286 50 148 chr17 43082852 43082944 -52189707 + RLTR18B LTR ERVK 533 616 0 2 913 627 245 57 123 chr17 43083183 43083411 -52189240 - MTEb LTR MaLR -3 376 164 2 913 323 188 159 56 chr17 43083453 43083560 -52189091 - B1F2 SINE Alu 0 149 32 2 913 2257 122 28 88 chr17 43083561 43084086 -52188565 - RLTR1B LTR ERV1 0 512 2 2 913 1193 120 0 6 chr17 43084136 43084312 -52188339 - B2_Mm2 SINE B2 -19 176 2 2 913 523 266 21 83 chr17 43084351 43084544 -52188107 - B3A SINE B2 -17 181 1 2 913 3476 10 0 0 chr17 43084576 43084961 -52187690 - L1Md_A LINE L1 0 6582 6198 2 913 340 302 40 40 chr17 43084964 43085088 -52187563 - B1_Mur1 SINE Alu -21 129 6 2 913 1752 203 169 12 chr17 43085297 43085337 -52187314 - MT2B LTR ERVL 0 601 555 2 913 333 0 0 0 chr17 43085337 43085374 -52187277 + (TCTA)n Simple_repeat Simple_repeat 1 37 0 2 913 633 27 0 0 chr17 43085374 43085448 -52187203 + (CA)n Simple_repeat Simple_repeat 2 76 0 2 913 1752 203 169 12 chr17 43085448 43085459 -52187192 - MT2B LTR ERVL -47 554 545 2 913 459 0 0 0 chr17 43085459 43085510 -52187141 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 913 1752 203 169 12 chr17 43085510 43085970 -52186681 - MT2B LTR ERVL -57 544 10 2 913 480 236 102 71 chr17 43086223 43086419 -52186232 - MTD LTR MaLR -17 402 201 2 913 356 103 0 17 chr17 43086421 43086480 -52186171 + (TCCC)n Simple_repeat Simple_repeat 4 61 0 2 913 1245 90 17 17 chr17 43086485 43086665 -52185986 - B2_Mm2 SINE B2 -14 181 2 2 913 1099 108 27 44 chr17 43086683 43086866 -52185785 - B2_Mm2 SINE B2 -14 181 2 2 913 388 305 49 14 chr17 43086896 43087039 -52185612 + B1F SINE Alu 1 148 -1 2 913 265 350 16 8 chr17 43087043 43087164 -52185487 + GA-rich Low_complexity Low_complexity 3 124 0 2 913 272 257 68 41 chr17 43087164 43087237 -52185414 + ID4 SINE ID 3 77 -6 2 913 270 214 3 81 chr17 43087665 43087747 -52184904 + MTEb LTR MaLR 307 404 -15 2 913 572 208 50 0 chr17 43088165 43088285 -52184366 - B1_Mur1 SINE Alu -14 135 10 2 913 526 264 13 7 chr17 43088350 43088499 -52184152 - RSINE1 SINE B4 -13 152 3 3 913 1014 82 68 0 chr17 43089018 43089165 -52183486 + B2_Mm2 SINE B2 2 158 -37 3 913 267 31 0 0 chr17 43089166 43089198 -52183453 + (CAAT)n Simple_repeat Simple_repeat 2 33 0 3 913 383 62 410 1 chr17 43089214 43089314 -52183337 + B2_Mm2 SINE B2 47 186 -9 3 913 437 190 51 2 chr17 43089958 43090065 -52182586 + PB1D10 SINE Alu 1 118 -2 3 913 229 377 13 0 chr17 43090074 43090151 -52182500 + RSINE1 SINE B4 1 78 -87 3 913 1505 55 6 0 chr17 43090160 43090342 -52182309 - B2_Mm1a SINE B2 -9 184 2 3 913 274 265 14 42 chr17 43090343 43090414 -52182237 + RSINE1 SINE B4 65 133 -32 3 913 423 113 0 0 chr17 43090418 43090489 -52182162 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 913 509 297 18 31 chr17 43090663 43090826 -52181825 - RSINE1 SINE B4 -3 162 2 3 913 633 205 111 78 chr17 43090829 43091046 -52181605 - B4 SINE B4 -67 225 2 3 913 504 0 0 0 chr17 43091452 43091508 -52181143 + (GA)n Simple_repeat Simple_repeat 1 56 0 3 913 452 207 0 0 chr17 43091875 43091957 -52180694 - B3 SINE B2 -130 86 5 3 913 425 269 37 9 chr17 43092762 43092871 -52179780 - B3A SINE B2 -42 156 45 3 913 21 36 0 0 chr17 43092900 43092928 -52179723 + AT_rich Low_complexity Low_complexity 1 28 0 3 913 445 204 11 11 chr17 43092960 43093049 -52179602 - PB1D9 SINE Alu -10 110 22 3 913 34 0 0 0 chr17 43093524 43093558 -52179093 + AT_rich Low_complexity Low_complexity 1 34 0 3 913 460 291 189 81 chr17 43093642 43094028 -52178623 - Lx8 LINE L1 -215 7258 6831 3 913 312 320 40 0 chr17 43094191 43094291 -52178360 + PB1D7 SINE Alu 6 109 -11 3 913 29 28 0 0 chr17 43094299 43094335 -52178316 + AT_rich Low_complexity Low_complexity 1 36 0 3 913 504 181 87 87 chr17 43094344 43094459 -52178192 - B1_Mur1 SINE Alu -6 143 29 3 913 708 247 23 35 chr17 43094461 43094633 -52178018 - B3 SINE B2 -46 170 1 3 913 417 39 0 0 chr17 43094643 43094694 -52177957 + (TC)n Simple_repeat Simple_repeat 1 51 0 3 913 272 272 0 110 chr17 43094836 43094927 -52177724 - B4A SINE B4 0 292 212 3 913 181 226 12 12 chr17 43094928 43095013 -52177638 + (TA)n Simple_repeat Simple_repeat 1 85 0 3 913 261 0 0 0 chr17 43095020 43095049 -52177602 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 913 302 0 26 0 chr17 43095049 43095086 -52177565 + (GA)n Simple_repeat Simple_repeat 1 39 0 3 913 5177 117 47 36 chr17 43095120 43096012 -52176639 - RMER17A2 LTR ERVK -4 902 1 3 913 427 290 148 0 chr17 43096184 43096339 -52176312 - B4A SINE B4 -61 231 54 3 913 27 62 0 0 chr17 43096352 43096400 -52176251 + AT_rich Low_complexity Low_complexity 1 48 0 3 913 547 299 22 74 chr17 43096402 43096617 -52176034 + ID_B1 SINE B4 2 206 -18 3 913 204 40 0 0 chr17 43096617 43096642 -52176009 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 3 913 547 299 22 74 chr17 43096642 43096657 -52175994 + ID_B1 SINE B4 207 220 -4 3 913 384 268 223 7 chr17 43096683 43096822 -52175829 + B4A SINE B4 6 174 -118 3 913 614 241 6 0 chr17 43096826 43096992 -52175659 + GA-rich Low_complexity Low_complexity 2 168 0 3 913 716 206 35 29 chr17 43097267 43097437 -52175214 - MTD LTR MaLR -8 411 241 3 913 457 279 40 20 chr17 43097497 43097698 -52174953 - RLTR15 LTR ERVK -154 205 1 3 913 618 253 117 9 chr17 43097698 43097823 -52174828 - MTD LTR MaLR -173 246 97 3 913 923 80 189 12 chr17 43097823 43097987 -52174664 - B2_Mm2 SINE B2 -1 194 2 3 913 618 253 117 9 chr17 43097987 43098083 -52174568 - MTD LTR MaLR -323 96 1 3 913 221 328 200 8 chr17 43098073 43098193 -52174458 + B1F2 SINE Alu 1 143 -6 3 913 979 97 7 0 chr17 43098203 43098347 -52174304 + B2_Mm2 SINE B2 1 145 -50 3 913 774 60 0 0 chr17 43098355 43098455 -52174196 + (GGAA)n Simple_repeat Simple_repeat 3 102 0 3 913 659 75 11 0 chr17 43098455 43098548 -52174103 + (GGGAA)n Simple_repeat Simple_repeat 1 95 0 3 913 1662 16 0 21 chr17 43098630 43098822 -52173829 + B2_Mm1a SINE B2 1 188 -5 3 913 776 266 19 90 chr17 43099304 43099614 -52173037 + B4A SINE B4 5 292 0 3 913 535 177 26 0 chr17 43099645 43099874 -52172777 + (CA)n Simple_repeat Simple_repeat 1 235 0 3 913 778 200 0 0 chr17 43099879 43100014 -52172637 + B1_Mus2 SINE Alu 1 135 -12 3 913 204 40 0 0 chr17 43100014 43100039 -52172612 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 3 913 223 71 48 0 chr17 43100045 43100087 -52172564 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 913 695 245 51 75 chr17 43100249 43100580 -52172071 + RLTR15 LTR ERVK 6 328 -31 3 913 596 230 102 30 chr17 43100598 43100764 -52171887 - B3 SINE B2 -37 179 2 3 913 388 275 37 0 chr17 43100819 43100928 -52171723 + RSINE1 SINE B4 28 140 -25 3 913 378 0 0 0 chr17 43100931 43100973 -52171678 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 913 4255 220 56 14 chr17 43101118 43101275 -52171376 - RMER1A Other Other -2 1028 872 3 913 1119 62 21 0 chr17 43101275 43101419 -52171232 + B1_Mus1 SINE Alu 2 148 0 3 913 4255 229 62 18 chr17 43101419 43102407 -52170244 - RMER1A Other Other -159 871 48 3 913 1189 284 10 10 chr17 43102419 43102718 -52169933 - RMER1B Other Other -703 363 65 3 913 27 0 0 0 chr17 43102844 43102871 -52169780 + AT_rich Low_complexity Low_complexity 1 27 0 3 913 541 236 0 0 chr17 43102926 43103036 -52169615 - B3 SINE B2 -106 110 1 3 913 1170 62 0 33 chr17 43103112 43103248 -52169403 + B1_Mus1 SINE Alu 1 136 -12 3 913 426 20 0 0 chr17 43103248 43103299 -52169352 + (CAAAA)n Simple_repeat Simple_repeat 3 53 0 3 913 288 70 0 0 chr17 43103300 43103343 -52169308 + (CCAA)n Simple_repeat Simple_repeat 1 43 0 3 913 1170 62 0 33 chr17 43103343 43103355 -52169296 + B1_Mus1 SINE Alu 137 146 -2 3 913 336 145 171 0 chr17 43103365 43103441 -52169210 - RMER1B Other Other -484 582 494 3 913 299 136 0 63 chr17 43103441 43103504 -52169147 + RMER6B LTR ERVK 350 408 -53 3 913 2029 105 99 79 chr17 43103511 43103916 -52168735 + RLTR23 LTR ERV1 10 422 -8 3 913 255 192 0 0 chr17 43103920 43103972 -52168679 + RMER6B LTR ERVK 407 458 -3 3 913 739 234 36 64 chr17 43103974 43104193 -52168458 + B3 SINE B2 4 216 0 3 913 251 254 0 33 chr17 43104200 43104261 -52168390 + B1_Mus2 SINE Alu 1 59 -88 3 913 304 0 0 160 chr17 43104262 43104418 -52168233 + (CAGAG)n Simple_repeat Simple_repeat 5 135 0 3 913 393 240 9 28 chr17 43104421 43104528 -52168123 + B1_Mur1 SINE Alu 42 146 -3 3 913 472 227 33 23 chr17 43104901 43105044 -52167607 + B1F1 SINE Alu 13 147 -2 3 913 225 0 0 0 chr17 43105051 43105076 -52167575 + (CAAT)n Simple_repeat Simple_repeat 3 27 0 3 913 298 327 86 22 chr17 43105082 43105351 -52167300 - L1M5 LINE L1 -414 5826 5541 3 913 208 293 0 0 chr17 43105553 43105611 -52167040 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 913 403 314 36 14 chr17 43105690 43105829 -52166822 - B1F SINE Alu -7 142 1 3 913 1748 120 45 21 chr17 43105881 43106205 -52166446 - RMER17D2 LTR ERVK 0 809 475 3 913 622 24 24 0 chr17 43106205 43106289 -52166362 + (GA)n Simple_repeat Simple_repeat 2 87 0 3 913 1944 107 10 16 chr17 43106289 43106583 -52166068 - RMER17D2 LTR ERVK -514 295 1 3 913 18754 83 14 35 chr17 43106597 43109112 -52163539 + L1VL4 LINE L1 24 2544 -1015 3 913 1133 76 7 7 chr17 43109112 43109258 -52163393 - B1_Mus1 SINE Alu -1 147 2 3 913 429 257 0 0 chr17 43109264 43109365 -52163286 - B2_Mm2 SINE B2 -91 104 4 3 913 18754 73 19 51 chr17 43109365 43110362 -52162289 + L1VL4 LINE L1 2551 3557 -2 3 913 30 0 0 0 chr17 43110548 43110578 -52162073 + AT_rich Low_complexity Low_complexity 1 30 0 3 913 742 203 0 40 chr17 43110606 43110755 -52161896 - B1_Mur1 SINE Alu -2 147 5 3 913 1384 78 10 20 chr17 43110803 43110999 -52161652 - B2_Mm2 SINE B2 0 195 2 3 913 574 251 62 51 chr17 43110999 43111175 -52161476 - B3A SINE B2 -16 182 5 3 913 423 211 9 71 chr17 43111724 43111836 -52160815 + Charlie1a DNA MER1_type 865 969 -486 3 913 620 266 14 0 chr17 43111844 43111983 -52160668 - ID_B1 SINE B4 -3 221 81 3 913 396 0 0 0 chr17 43112006 43112050 -52160601 + (TC)n Simple_repeat Simple_repeat 2 45 0 3 913 462 313 45 45 chr17 43112115 43112403 -52160248 - B4A SINE B4 -2 290 3 3 913 333 0 0 0 chr17 43113158 43113195 -52159456 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 3 913 1189 69 0 0 chr17 43113197 43113356 -52159295 - B2_Mm2 SINE B2 -36 159 1 3 913 423 0 0 0 chr17 43113508 43113555 -52159096 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 3 913 931 84 35 7 chr17 43113555 43113698 -52158953 - B2_Mm1a SINE B2 -33 160 14 3 913 1094 184 25 0 chr17 43113750 43113951 -52158700 + B3 SINE B2 5 210 -6 3 913 765 179 14 14 chr17 43114977 43115119 -52157532 + B1_Mus1 SINE Alu 7 148 0 3 913 1115 71 29 0 chr17 43115178 43115318 -52157333 + B1_Mus1 SINE Alu 2 145 -3 3 913 779 251 141 13 chr17 43115360 43115594 -52157057 - Lx8 LINE L1 -235 7238 6975 3 913 194 62 0 30 chr17 43115620 43115653 -52156998 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 913 321 199 43 12 chr17 43115760 43115923 -52156728 + (TA)n Simple_repeat Simple_repeat 1 168 0 3 913 347 168 31 43 chr17 43115936 43116098 -52156553 + (TA)n Simple_repeat Simple_repeat 2 161 0 3 913 433 296 71 36 chr17 43116115 43116283 -52156368 - B4A SINE B4 -112 180 7 3 913 26 50 0 0 chr17 43116307 43116347 -52156304 + AT_rich Low_complexity Low_complexity 1 40 0 3 913 1002 39 19 25 chr17 43116353 43116512 -52156139 - L1_Mus4 LINE L1 0 6636 6479 3 913 345 105 0 34 chr17 43116526 43116585 -52156066 + B1_Mus2 SINE Alu 90 146 -1 3 913 1150 63 21 0 chr17 43116645 43116787 -52155864 + B1_Mus1 SINE Alu 2 146 -2 3 913 225 0 0 0 chr17 43116823 43116848 -52155803 + (GA)n Simple_repeat Simple_repeat 2 26 0 3 913 201 196 36 0 chr17 43116961 43117017 -52155634 + (TAAG)n Simple_repeat Simple_repeat 2 59 0 3 913 1389 81 38 0 chr17 43117051 43117236 -52155415 + B2_Mm2 SINE B2 2 193 -2 4 913 650 278 48 5 chr17 43117284 43117494 -52155157 - Lx7 LINE L1 -389 7307 7089 4 913 418 301 51 14 chr17 43117502 43117640 -52155011 - LTR16A LTR ERVL -23 428 286 4 913 180 111 0 0 chr17 43117881 43117908 -52154743 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 4 913 27 49 0 0 chr17 43117923 43117964 -52154687 + AT_rich Low_complexity Low_complexity 1 41 0 4 913 654 271 71 0 chr17 43117964 43118134 -52154517 - ID_B1 SINE B4 -21 203 22 4 913 263 313 0 12 chr17 43118176 43118260 -52154391 + CT-rich Low_complexity Low_complexity 2 84 0 4 913 775 162 22 0 chr17 43118343 43118479 -52154172 - B1_Mur2 SINE Alu -1 148 10 4 913 621 308 17 26 chr17 43118484 43118717 -52153934 - Lx8 LINE L1 0 7473 7243 4 913 269 264 42 0 chr17 43119056 43119128 -52153523 - RLTR24 LTR ERV1 -454 75 1 4 913 1173 246 171 15 chr17 43119128 43119538 -52153113 - Lx8 LINE L1 -221 7252 6779 4 913 391 252 201 96 chr17 43119606 43119939 -52152712 + RLTR9A LTR ERVK 1 368 0 4 913 922 137 19 6 chr17 43119939 43120075 -52152576 + URR1B DNA MER1_type 88 225 0 4 913 774 283 100 20 chr17 43120083 43120332 -52152319 - Lx8 LINE L1 -753 6720 6452 4 913 374 176 94 0 chr17 43120332 43120417 -52152234 - ID_B1 SINE B4 -68 156 64 4 913 216 0 0 0 chr17 43120500 43120524 -52152127 + (TTA)n Simple_repeat Simple_repeat 1 24 0 4 913 378 298 0 0 chr17 43120605 43120756 -52151895 + (TA)n Simple_repeat Simple_repeat 1 151 0 4 913 343 220 18 107 chr17 43120893 43121005 -52151646 + MT2B LTR ERVL 156 257 -344 4 913 692 178 30 0 chr17 43120911 43121046 -52151605 + B1_Mus2 SINE Alu 9 147 0 4 913 719 277 0 0 chr17 43121177 43121325 -52151326 + RSINE1 SINE B4 2 149 -16 4 913 703 307 52 52 chr17 43121355 43121626 -52151025 + B4A SINE B4 1 271 -21 4 913 308 186 29 0 chr17 43121636 43121706 -52150945 + MTD LTR MaLR 307 378 -41 4 913 1244 98 60 0 chr17 43122089 43122273 -52150378 + B2_Mm2 SINE B2 1 195 0 4 913 892 92 215 32 chr17 43122502 43122660 -52149991 - B2_Mm2 SINE B2 -7 188 2 4 914 899 176 164 6 chr17 43122887 43123070 -52149581 - B3 SINE B2 -3 213 2 4 914 244 316 13 0 chr17 43123087 43123163 -52149488 - B4A SINE B4 -215 77 1 4 914 392 320 31 0 chr17 43123193 43123290 -52149361 - RSINE1 SINE B4 -16 149 50 4 914 189 0 0 0 chr17 43123420 43123441 -52149210 + (CAGCC)n Simple_repeat Simple_repeat 5 25 0 4 914 1077 118 0 0 chr17 43123619 43123788 -52148863 + (TTCC)n Simple_repeat Simple_repeat 3 171 0 4 914 451 193 80 0 chr17 43124297 43124385 -52148266 + RSINE1 SINE B4 12 106 -59 4 914 1054 215 9 19 chr17 43124750 43124963 -52147688 - B3 SINE B2 -2 214 4 4 914 23 78 0 0 chr17 43125070 43125121 -52147530 + AT_rich Low_complexity Low_complexity 1 51 0 4 914 681 204 22 39 chr17 43125198 43125377 -52147274 + B3A SINE B2 2 177 -21 4 914 260 172 0 17 chr17 43125525 43125584 -52147067 + CT-rich Low_complexity Low_complexity 2 59 0 4 914 648 232 86 11 chr17 43125586 43125773 -52146878 - B3 SINE B2 -15 201 1 4 914 1137 77 94 6 chr17 43126162 43126332 -52146319 + B2_Mm2 SINE B2 5 189 -6 4 914 949 185 42 0 chr17 43126998 43127187 -52145464 - B3 SINE B2 -18 198 2 4 914 729 51 0 0 chr17 43127418 43127516 -52145135 + (TG)n Simple_repeat Simple_repeat 2 99 0 4 914 225 132 0 0 chr17 43127578 43127616 -52145035 + (TATATG)n Simple_repeat Simple_repeat 4 41 0 4 914 315 0 0 0 chr17 43127616 43127651 -52145000 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 914 597 256 0 66 chr17 43127692 43127859 -52144792 + RSINE1 SINE B4 3 158 -7 4 914 227 306 99 0 chr17 43128450 43128561 -52144090 + MIRb SINE MIR 40 161 -107 4 914 22 35 0 0 chr17 43129642 43129671 -52142980 + AT_rich Low_complexity Low_complexity 1 29 0 4 914 207 315 13 64 chr17 43129836 43129914 -52142737 - L2c LINE L2 -40 3347 3274 4 914 419 291 0 0 chr17 43130025 43130135 -52142516 - RSINE1 SINE B4 -51 114 5 4 914 933 134 250 6 chr17 43130213 43130385 -52142266 + B3 SINE B2 3 216 0 4 914 21 36 0 0 chr17 43130486 43130514 -52142137 + AT_rich Low_complexity Low_complexity 1 28 0 4 914 266 203 0 30 chr17 43130545 43130611 -52142040 + B4A SINE B4 221 284 -8 4 914 278 232 106 2 chr17 43130686 43130804 -52141847 - L1M LINE L1 -916 5384 5258 4 914 615 219 0 0 chr17 43130873 43130987 -52141664 - B1_Mur4 SINE Alu -21 129 16 4 914 1572 319 131 8 chr17 43131271 43132165 -52140486 - L1M4b LINE L1 -6321 1013 10 4 914 413 178 23 29 chr17 43132319 43132493 -52140158 + (TATAA)n Simple_repeat Simple_repeat 5 177 0 4 914 284 269 81 32 chr17 43132521 43132644 -52140007 + L1M LINE L1 5259 5387 -807 4 914 595 328 30 26 chr17 43132686 43132952 -52139699 + B4A SINE B4 4 270 -22 4 914 351 0 0 0 chr17 43133032 43133071 -52139580 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 914 622 117 0 19 chr17 43133105 43133210 -52139441 + ORR1B1 LTR MaLR 1 103 -226 4 914 1581 55 5 5 chr17 43133343 43133544 -52139107 - L1_Mus3 LINE L1 -718 5920 5720 4 914 1485 133 17 0 chr17 43133545 43133785 -52138866 + ORR1B1 LTR MaLR 140 383 -11 4 914 519 318 6 31 chr17 43133823 43133982 -52138669 + RSINE1 SINE B4 3 157 -8 4 914 1212 236 102 16 chr17 43134112 43134496 -52138155 - MTD LTR MaLR 0 419 3 4 914 767 271 70 0 chr17 43135053 43135252 -52137399 + B4A SINE B4 2 214 -78 4 914 252 0 0 0 chr17 43135252 43135280 -52137371 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 4 914 1091 206 180 16 chr17 43135292 43135608 -52137043 + MTD LTR MaLR 1 368 -51 4 914 331 356 138 27 chr17 43135614 43135874 -52136777 + B4A SINE B4 1 289 -3 4 914 425 19 19 0 chr17 43136266 43136320 -52136331 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 914 351 0 0 0 chr17 43138323 43138362 -52134289 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 914 492 134 0 0 chr17 43138362 43138459 -52134192 + (GA)n Simple_repeat Simple_repeat 1 97 0 4 914 214 29 0 54 chr17 43138467 43138504 -52134147 + (AGGGGG)n Simple_repeat Simple_repeat 4 38 0 4 914 290 235 34 34 chr17 43138568 43138656 -52133995 + B4A SINE B4 41 128 -164 4 914 211 271 0 17 chr17 43139531 43139591 -52133060 + GA-rich Low_complexity Low_complexity 2 60 0 4 914 297 331 92 0 chr17 43139633 43139763 -52132888 - ID_B1 SINE B4 -1 223 82 4 914 3339 94 20 2 chr17 43139948 43140436 -52132215 - L1_Mus3 LINE L1 0 6638 6142 4 914 2877 72 8 16 chr17 43140436 43140819 -52131832 + L1_Mus3 LINE L1 5772 6151 -485 4 914 1230 48 0 0 chr17 43141121 43141267 -52131384 + B1_Mus2 SINE Alu 2 147 0 4 914 941 216 14 38 chr17 43141273 43141321 -52131330 - ID_B1 SINE B4 -13 211 169 4 914 3255 55 0 12 chr17 43141321 43141726 -52130925 + MTB LTR MaLR 1 400 0 4 914 941 216 14 38 chr17 43141726 43141889 -52130762 - ID_B1 SINE B4 -56 168 5 4 914 391 298 62 34 chr17 43142220 43142366 -52130285 - MIRb SINE MIR -14 254 105 4 914 393 88 0 68 chr17 43142369 43142442 -52130209 - ORR1B1 LTR MaLR -8 386 319 4 914 675 262 12 0 chr17 43142442 43142610 -52130041 - ORR1D2-int LTR MaLR -1200 170 1 4 914 1301 246 35 29 chr17 43142610 43142958 -52129693 - ORR1D2 LTR MaLR 0 370 21 4 914 345 24 0 0 chr17 43143152 43143194 -52129457 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 914 262 295 16 0 chr17 43143198 43143259 -52129392 - B3A SINE B2 -30 168 107 4 914 527 167 14 55 chr17 43143257 43143403 -52129248 - RMER10A LTR ERVL -78 364 225 4 914 494 129 12 0 chr17 43143403 43143488 -52129163 + (CA)n Simple_repeat Simple_repeat 1 86 0 4 914 596 199 80 7 chr17 43143649 43143786 -52128865 + B1_Mur1 SINE Alu 3 149 0 4 914 409 235 0 27 chr17 43144423 43144607 -52128044 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 914 834 256 96 4 chr17 43144630 43144869 -52127782 - Lx8 LINE L1 -268 7205 6945 4 914 486 296 82 53 chr17 43145083 43145326 -52127325 - B4A SINE B4 -10 282 33 4 914 342 0 0 0 chr17 43145400 43145438 -52127213 + (TC)n Simple_repeat Simple_repeat 2 39 0 4 914 234 0 0 0 chr17 43145438 43145463 -52127188 + (TA)n Simple_repeat Simple_repeat 1 26 0 4 914 668 256 47 12 chr17 43145675 43145885 -52126766 - L1M2 LINE L1 -2797 3050 2838 4 914 1156 257 83 36 chr17 43146013 43146397 -52126254 - MTD LTR MaLR 0 419 18 4 914 271 203 33 33 chr17 43146683 43146744 -52125907 + ID4 SINE ID 8 68 -15 4 914 1098 195 49 0 chr17 43146802 43147007 -52125644 + B3 SINE B2 2 216 0 4 914 222 136 0 0 chr17 43147096 43147140 -52125511 + (TAAA)n Simple_repeat Simple_repeat 4 47 0 4 914 230 340 102 20 chr17 43147144 43147291 -52125360 + B3A SINE B2 2 160 -38 4 914 699 112 0 0 chr17 43147299 43147406 -52125245 + (TC)n Simple_repeat Simple_repeat 2 108 0 4 914 336 24 0 0 chr17 43147409 43147450 -52125201 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 914 468 274 53 38 chr17 43147475 43147608 -52125043 + B1_Mur1 SINE Alu 15 149 0 4 914 204 276 114 68 chr17 43148227 43148359 -52124292 - L2c LINE L2 -5 3382 3245 4 914 252 0 0 0 chr17 43148486 43148514 -52124137 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 4 914 208 77 25 25 chr17 43148928 43148968 -52123683 + (TCCC)n Simple_repeat Simple_repeat 2 41 0 4 914 217 234 15 45 chr17 43148968 43149035 -52123616 - ID4_ SINE ID -3 80 16 4 914 466 281 2 6 chr17 43149308 43149428 -52123223 - Lx8 LINE L1 -753 6720 6593 4 914 846 235 5 21 chr17 43149444 43149631 -52123020 - B3 SINE B2 -6 210 27 4 914 468 237 92 17 chr17 43149764 43149884 -52122767 - B3 SINE B2 0 216 88 5 914 808 276 137 26 chr17 43149894 43150207 -52122444 - Lx9 LINE L1 -1004 6640 6293 5 914 863 265 0 10 chr17 43150227 43150425 -52122226 - B3 SINE B2 -6 210 15 5 914 422 71 353 29 chr17 43151231 43151333 -52121318 - B2_Mm2 SINE B2 -14 181 47 5 914 1302 69 11 39 chr17 43151384 43151565 -52121086 - B2_Mm1t SINE B2 -14 179 4 5 914 224 30 0 29 chr17 43151596 43151630 -52121021 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 5 914 765 0 0 0 chr17 43152619 43152704 -52119947 + (GGAGA)n Simple_repeat Simple_repeat 5 89 0 5 914 303 238 12 71 chr17 43152704 43152806 -52119845 - MTEb LTR MaLR -136 243 147 5 914 321 26 0 0 chr17 43152904 43152942 -52119709 + (ATTG)n Simple_repeat Simple_repeat 2 39 0 5 914 270 115 0 0 chr17 43153064 43153116 -52119535 + (TTCA)n Simple_repeat Simple_repeat 4 55 0 5 914 309 333 0 10 chr17 43153116 43153216 -52119435 - PB1D10 SINE Alu -12 105 7 5 914 249 351 0 18 chr17 43153123 43153236 -52119415 - ID_B1 SINE B4 -45 179 69 5 914 405 0 0 0 chr17 43154207 43154252 -52118399 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 914 236 300 0 0 chr17 43154687 43154757 -52117894 + GA-rich Low_complexity Low_complexity 3 72 0 5 914 195 69 0 0 chr17 43155333 43155362 -52117289 + (TC)n Simple_repeat Simple_repeat 2 30 0 5 914 549 0 0 0 chr17 43155377 43155438 -52117213 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 914 465 19 0 0 chr17 43155440 43155494 -52117157 + (GA)n Simple_repeat Simple_repeat 2 55 0 5 914 1090 202 19 50 chr17 43157243 43157503 -52115148 + Lx9 LINE L1 7088 7339 -305 5 914 392 176 128 50 chr17 43157527 43157707 -52114944 + Lx9 LINE L1 7420 7613 -31 5 914 198 0 0 0 chr17 43157797 43157819 -52114832 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 5 914 255 61 0 0 chr17 43158652 43158685 -52113966 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 5 914 22 0 0 0 chr17 43159036 43159058 -52113593 + AT_rich Low_complexity Low_complexity 1 22 0 5 914 34 24 0 0 chr17 43160223 43160264 -52112387 + AT_rich Low_complexity Low_complexity 1 41 0 5 914 1471 294 38 38 chr17 43161114 43161697 -52110954 - Lx8 LINE L1 -12 7461 6879 5 914 414 203 48 13 chr17 43162470 43162587 -52110064 - B3A SINE B2 -80 113 3 5 914 319 250 44 0 chr17 43162823 43162891 -52109760 - ID4 SINE ID -11 72 2 5 914 262 362 33 44 chr17 43163301 43163483 -52109168 - L1M5 LINE L1 -423 5701 5522 5 914 375 239 171 43 chr17 43163787 43163927 -52108724 - RSINE1 SINE B4 0 165 8 5 914 302 59 0 56 chr17 43164016 43164070 -52108581 + (T)n Simple_repeat Simple_repeat 1 51 0 5 914 384 22 0 0 chr17 43164224 43164269 -52108382 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 914 617 297 84 32 chr17 43164428 43164713 -52107938 - MER58B DNA MER1_type -1 340 41 5 914 31 46 0 30 chr17 43165184 43165223 -52107428 + AT_rich Low_complexity Low_complexity 1 39 0 5 914 1131 77 0 0 chr17 43165223 43165366 -52107285 - B1_Mus2 SINE Alu -1 146 4 5 914 31 46 0 30 chr17 43165366 43165393 -52107258 + AT_rich Low_complexity Low_complexity 1 26 0 5 914 309 382 15 0 chr17 43165413 43165544 -52107107 - B1F SINE Alu -9 140 8 5 914 439 278 1 3 chr17 43165680 43165795 -52106856 - B1F SINE Alu -22 127 12 5 914 433 33 42 42 chr17 43165900 43165996 -52106655 + (CAAAA)n Simple_repeat Simple_repeat 5 100 0 5 914 1237 319 104 34 chr17 43166313 43167021 -52105630 - MER21B LTR ERV1 -105 758 1 5 914 269 174 10 42 chr17 43167519 43167615 -52105036 + CT-rich Low_complexity Low_complexity 3 95 0 5 914 453 116 0 0 chr17 43167919 43167988 -52104663 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 914 213 39 0 0 chr17 43167988 43168014 -52104637 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 914 1016 260 7 32 chr17 43168152 43168430 -52104221 + B4A SINE B4 1 271 -21 5 914 479 60 15 0 chr17 43168450 43168517 -52104134 + (CA)n Simple_repeat Simple_repeat 2 69 0 5 914 365 165 38 0 chr17 43168938 43169017 -52103634 - L1Md_F2 LINE L1 0 6582 6501 5 914 227 75 0 0 chr17 43169262 43169302 -52103349 + B3 SINE B2 1 40 -176 5 914 1091 46 0 0 chr17 43169302 43169433 -52103218 + B1_Mus2 SINE Alu 2 132 -15 5 914 459 35 0 0 chr17 43169680 43169737 -52102914 + (GA)n Simple_repeat Simple_repeat 1 57 0 5 914 276 310 8 58 chr17 43169832 43169952 -52102699 - MER58B DNA MER1_type -2 339 226 5 914 189 74 0 0 chr17 43171419 43171446 -52101205 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 914 342 363 39 6 chr17 43171457 43171637 -52101014 - B4A SINE B4 0 292 107 5 914 242 237 13 0 chr17 43171992 43172068 -52100583 + (TATG)n Simple_repeat Simple_repeat 3 79 0 5 914 570 238 8 8 chr17 43172068 43172191 -52100460 - ID_B1 SINE B4 -12 212 90 5 914 335 271 0 23 chr17 43172200 43172287 -52100364 - PB1D10 SINE Alu -2 115 31 5 914 425 204 107 36 chr17 43172739 43172851 -52099800 + PB1D7 SINE Alu 1 120 0 5 914 477 0 0 0 chr17 43173873 43173926 -52098725 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 914 877 175 0 0 chr17 43173927 43174064 -52098587 - B1_Mus2 SINE Alu -6 141 5 5 914 306 0 0 0 chr17 43174321 43174355 -52098296 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 914 189 0 0 0 chr17 43175743 43175764 -52096887 + (T)n Simple_repeat Simple_repeat 1 21 0 5 914 526 207 107 27 chr17 43177574 43177586 -52095065 - RSINE1 SINE B4 -2 163 152 5 914 192 77 0 0 chr17 43177586 43177612 -52095039 + (CATG)n Simple_repeat Simple_repeat 3 28 0 5 914 526 207 107 27 chr17 43177612 43177748 -52094903 - RSINE1 SINE B4 -14 151 3 5 914 477 0 0 0 chr17 43177868 43177921 -52094730 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 914 359 255 29 10 chr17 43178395 43178498 -52094153 - PB1D10 SINE Alu -12 105 1 5 914 244 250 0 0 chr17 43178982 43179050 -52093601 + RMER30 DNA MER1_type 133 200 -2 5 914 577 237 0 29 chr17 43179254 43179393 -52093258 - ID_B1 SINE B4 -5 219 85 5 914 1475 238 87 13 chr17 43179714 43180093 -52092558 - MTD LTR MaLR 0 419 13 5 914 218 167 0 0 chr17 43180173 43180199 -52092452 + T-rich Low_complexity Low_complexity 23 48 0 5 914 1237 41 0 7 chr17 43180199 43180346 -52092305 - B1_Mus1 SINE Alu 0 148 3 5 914 218 167 0 0 chr17 43180346 43180367 -52092284 + T-rich Low_complexity Low_complexity 2 22 0 5 914 208 280 0 0 chr17 43180373 43180423 -52092228 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 914 497 307 97 8 chr17 43180426 43180685 -52091966 - B4A SINE B4 -4 288 7 5 914 703 263 0 25 chr17 43181046 43181206 -52091445 - RSINE1 SINE B4 -7 158 3 5 914 240 320 64 48 chr17 43181905 43182092 -52090559 - Lx8 LINE L1 -230 7243 7054 5 914 346 272 222 25 chr17 43182604 43182766 -52089885 + B3A SINE B2 2 195 -3 5 914 265 268 122 0 chr17 43182810 43182892 -52089759 + B1F SINE Alu 35 126 -23 5 914 243 88 0 0 chr17 43182898 43182932 -52089719 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 914 300 70 0 0 chr17 43182997 43183040 -52089611 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 914 490 311 65 55 chr17 43183681 43183882 -52088769 - ID_B1 SINE B4 0 224 22 5 914 323 322 54 40 chr17 43184125 43184274 -52088377 - MER3 DNA MER1_type -58 151 1 5 914 22 0 0 0 chr17 43184415 43184437 -52088214 + AT_rich Low_complexity Low_complexity 1 22 0 5 914 418 182 13 0 chr17 43184464 43184541 -52088110 - B3A SINE B2 -119 79 2 5 914 1217 125 6 0 chr17 43186976 43187152 -52085499 - B2_Mm1t SINE B2 -14 179 3 5 914 1305 83 0 0 chr17 43187158 43187338 -52085313 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 5 914 297 167 0 0 chr17 43187339 43187393 -52085258 + CT-rich Low_complexity Low_complexity 2 55 0 5 914 200 184 20 0 chr17 43187578 43187627 -52085024 + GA-rich Low_complexity Low_complexity 1 50 0 5 914 184 331 70 70 chr17 43187643 43187799 -52084852 - MIRm SINE MIR -115 161 6 5 914 780 83 0 0 chr17 43188356 43188465 -52084186 + (TTCC)n Simple_repeat Simple_repeat 4 112 0 5 914 474 65 0 0 chr17 43188528 43188590 -52084061 + (TG)n Simple_repeat Simple_repeat 1 62 0 5 914 560 272 126 48 chr17 43188619 43188889 -52083762 - B4 SINE B4 0 292 2 5 914 232 299 111 0 chr17 43189001 43189118 -52083533 - MIR SINE MIR -74 188 59 5 914 475 195 0 0 chr17 43189344 43189426 -52083225 + B4 SINE B4 4 85 -207 5 914 219 283 81 71 chr17 43189426 43189443 -52083208 + B3A SINE B2 4 103 -95 5 914 652 217 36 7 chr17 43190257 43190396 -52082255 + B1F SINE Alu 6 148 -1 5 914 385 307 32 32 chr17 43191298 43191456 -52081195 - RSINE1 SINE B4 -6 159 2 5 914 356 250 67 9 chr17 43191491 43191596 -52081055 - MTEb LTR MaLR -2 377 267 5 914 234 178 21 12 chr17 43192050 43192109 -52080542 - ID4_ SINE ID -95 57 1 5 914 491 290 16 170 chr17 43192222 43192309 -52080342 - B4A SINE B4 -3 289 225 5 914 919 156 0 20 chr17 43192309 43192324 -52080327 - B1_Mus2 SINE Alu 0 147 135 5 914 288 0 0 0 chr17 43192324 43192356 -52080295 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 5 914 919 156 0 20 chr17 43192356 43192490 -52080161 - B1_Mus2 SINE Alu -13 134 1 5 914 628 290 16 170 chr17 43192490 43192714 -52079937 - B4 SINE B4 -68 224 26 5 914 225 297 0 13 chr17 43193218 43193293 -52079358 - Kanga1d DNA Tc2 0 609 536 5 914 286 282 136 16 chr17 43193421 43193605 -52079046 + L2 LINE L2 2023 2228 -1191 5 914 250 156 22 0 chr17 43193647 43193692 -52078959 - MTC LTR MaLR -375 46 1 5 914 365 254 44 73 chr17 43194582 43194718 -52077933 + B1_Mur1 SINE Alu 1 132 -17 6 914 2098 188 21 21 chr17 43195634 43196053 -52076598 - MTD LTR MaLR 0 419 1 6 914 819 325 8 4 chr17 43196225 43196478 -52076173 - MER2 DNA MER2_type -5 340 87 6 914 482 251 39 88 chr17 43196588 43196793 -52075858 - B3A SINE B2 -3 195 1 6 914 277 254 0 0 chr17 43196799 43196862 -52075789 + ID_B1 SINE B4 161 223 -1 6 914 576 0 0 0 chr17 43196899 43196963 -52075688 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 6 914 294 263 84 8 chr17 43197289 43197408 -52075243 - B4A SINE B4 -77 215 88 6 914 871 61 126 22 chr17 43198120 43198255 -52074396 - B1_Mur4 SINE Alu -1 149 1 6 914 900 176 0 0 chr17 43198611 43198781 -52073870 + CT-rich Low_complexity Low_complexity 1 170 0 6 914 1170 112 0 0 chr17 43198785 43198963 -52073688 + (TCTCCC)n Simple_repeat Simple_repeat 3 180 0 6 914 268 83 42 0 chr17 43199088 43199136 -52073515 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 914 191 36 36 0 chr17 43199429 43199457 -52073194 + (TTA)n Simple_repeat Simple_repeat 2 30 0 6 914 287 125 21 0 chr17 43200019 43200067 -52072584 + Tigger7 DNA MER2_type 374 422 -2069 6 914 478 220 90 8 chr17 43200228 43200361 -52072290 + Tigger7 DNA MER2_type 464 607 -1884 6 914 232 338 38 0 chr17 43200360 43200440 -52072211 + Tigger7 DNA MER2_type 2409 2491 0 6 914 272 323 50 0 chr17 43200863 43200962 -52071689 - PB1D10 SINE Alu -13 104 1 6 914 512 310 51 0 chr17 43201054 43201212 -52071439 - B3A SINE B2 -30 168 3 6 914 209 108 27 0 chr17 43201595 43201632 -52071019 + (TCTCCC)n Simple_repeat Simple_repeat 5 42 0 6 914 459 0 0 0 chr17 43201632 43201683 -52070968 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 914 351 78 0 0 chr17 43202307 43202358 -52070293 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 914 192 358 71 24 chr17 43202392 43202561 -52070090 + MER5B DNA MER1_type 2 178 0 6 914 249 351 44 26 chr17 43202864 43202978 -52069673 + MIRb SINE MIR 14 129 -139 6 914 2432 99 3 0 chr17 43203007 43203331 -52069320 - ORR1A2 LTR MaLR -2 325 1 6 914 3465 56 31 2 chr17 43203977 43204422 -52068229 - L1Md_F3 LINE L1 0 6584 6127 6 914 2126 90 29 0 chr17 43204432 43204742 -52067909 - ORR1A2 LTR MaLR -8 319 1 6 914 1007 207 0 0 chr17 43204742 43204930 -52067721 - B3 SINE B2 -20 196 9 6 914 699 172 68 30 chr17 43205281 43205413 -52067238 + B1_Mur2 SINE Alu 2 138 -11 6 914 309 51 0 0 chr17 43205413 43205452 -52067199 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 914 237 178 0 0 chr17 43205655 43205700 -52066951 + C-rich Low_complexity Low_complexity 5 49 0 6 914 1144 88 12 0 chr17 43205703 43205874 -52066777 + (TTTC)n Simple_repeat Simple_repeat 3 175 0 6 914 501 17 0 0 chr17 43206642 43206700 -52065951 + (TG)n Simple_repeat Simple_repeat 2 59 0 6 914 321 311 19 0 chr17 43206710 43206816 -52065835 - B3A SINE B2 -84 114 7 6 914 396 0 0 0 chr17 43206855 43206899 -52065752 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 914 604 228 144 17 chr17 43207046 43207220 -52065431 + ID_B1 SINE B4 1 196 -28 6 914 549 216 36 0 chr17 43208620 43208731 -52063920 + B1_Mur2 SINE Alu 30 144 -5 6 914 21 0 0 0 chr17 43208756 43208777 -52063874 + AT_rich Low_complexity Low_complexity 1 21 0 6 914 546 255 33 7 chr17 43208781 43208931 -52063720 + B3 SINE B2 1 154 -62 6 914 329 22 0 43 chr17 43208932 43208979 -52063672 + (CATA)n Simple_repeat Simple_repeat 3 47 0 6 914 276 351 54 9 chr17 43209029 43209141 -52063510 + PB1D10 SINE Alu 1 117 0 6 914 200 111 28 0 chr17 43209167 43209203 -52063448 + (GA)n Simple_repeat Simple_repeat 2 38 0 6 914 22 0 0 0 chr17 43209590 43209612 -52063039 + AT_rich Low_complexity Low_complexity 1 22 0 6 914 449 210 126 0 chr17 43210106 43210225 -52062426 + B1F1 SINE Alu 1 134 -15 6 914 195 42 0 0 chr17 43210225 43210249 -52062402 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 6 914 1065 164 5 11 chr17 43211017 43211208 -52061443 + URR1B DNA MER1_type 1 190 -35 6 914 230 180 62 47 chr17 43211214 43211342 -52061309 + (TATAA)n Simple_repeat Simple_repeat 1 130 0 6 914 292 51 0 0 chr17 43211361 43211400 -52061251 + URR1B DNA MER1_type 187 225 0 6 914 803 177 57 0 chr17 43211496 43211637 -52061014 - B1_Mur3 SINE Alu 0 149 1 6 914 215 133 22 0 chr17 43211680 43211725 -52060926 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 914 279 0 0 0 chr17 43212636 43212667 -52059984 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 914 336 261 135 0 chr17 43213343 43213454 -52059197 + RSINE1 SINE B4 3 128 -37 6 914 240 35 0 0 chr17 43213463 43213492 -52059159 + (CA)n Simple_repeat Simple_repeat 1 29 0 6 914 440 187 75 21 chr17 43213554 43213631 -52059020 + B1_Mur2 SINE Alu 1 84 -65 6 914 417 39 0 0 chr17 43213631 43213682 -52058969 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 914 440 187 113 37 chr17 43213682 43213735 -52058916 + B1_Mur2 SINE Alu 85 149 -1 6 914 513 0 0 0 chr17 43214026 43214083 -52058568 + (TTTA)n Simple_repeat Simple_repeat 4 60 0 6 914 771 111 14 56 chr17 43215199 43215342 -52057309 + B1_Mus2 SINE Alu 11 147 0 6 914 572 273 0 8 chr17 43215442 43215575 -52057076 + B3A SINE B2 2 133 -65 6 914 378 0 0 0 chr17 43215577 43215619 -52057032 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 914 26 0 0 0 chr17 43215629 43215655 -52056996 + AT_rich Low_complexity Low_complexity 1 26 0 6 914 366 136 48 48 chr17 43215751 43215875 -52056776 - Lx9 LINE L1 0 7644 7521 6 914 23 0 0 0 chr17 43216001 43216024 -52056627 + AT_rich Low_complexity Low_complexity 1 23 0 6 914 764 251 5 20 chr17 43216028 43216227 -52056424 - B3 SINE B2 -20 196 1 6 914 202 194 0 0 chr17 43216868 43216904 -52055747 + CT-rich Low_complexity Low_complexity 2 37 0 6 914 647 191 106 7 chr17 43216941 43217083 -52055568 - ID_B1 SINE B4 -67 157 2 6 914 261 0 0 0 chr17 43218651 43218680 -52053971 + (A)n Simple_repeat Simple_repeat 1 29 0 6 914 228 86 0 0 chr17 43219087 43219122 -52053529 + (T)n Simple_repeat Simple_repeat 1 35 0 6 914 324 292 224 6 chr17 43219201 43219362 -52053289 + ID_B1 SINE B4 3 198 -26 6 914 315 0 0 0 chr17 43219378 43219413 -52053238 + (CCAA)n Simple_repeat Simple_repeat 4 38 0 6 914 204 40 0 0 chr17 43220009 43220034 -52052617 + (T)n Simple_repeat Simple_repeat 1 25 0 6 914 500 303 117 101 chr17 43220675 43220781 -52051870 - MTE2b LTR MaLR -113 266 177 6 914 513 277 87 43 chr17 43220781 43220966 -52051685 - B3A SINE B2 -5 193 1 6 914 500 303 117 101 chr17 43220966 43221116 -52051535 - MTE2b LTR MaLR -203 176 6 6 914 190 182 36 18 chr17 43221246 43221302 -52051349 + CT-rich Low_complexity Low_complexity 1 57 0 6 914 632 281 132 33 chr17 43221431 43221674 -52050977 + MTE2b LTR MaLR 109 375 -4 6 914 444 267 0 19 chr17 43222010 43222117 -52050534 + PB1D9 SINE Alu 1 105 -15 6 914 23 33 0 0 chr17 43222244 43222274 -52050377 + AT_rich Low_complexity Low_complexity 1 30 0 6 914 417 280 147 25 chr17 43222917 43223039 -52049612 + ID_B1 SINE B4 1 142 -82 6 914 524 200 42 25 chr17 43223039 43223145 -52049506 + PB1D9 SINE Alu 1 110 -10 6 914 243 0 0 0 chr17 43223145 43223172 -52049479 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 914 524 200 42 25 chr17 43223172 43223183 -52049468 + PB1D9 SINE Alu 111 120 0 6 914 417 280 147 25 chr17 43223183 43223258 -52049393 + ID_B1 SINE B4 143 222 -2 6 914 556 218 75 8 chr17 43223295 43223429 -52049222 - B1F SINE Alu -5 144 2 6 914 1172 76 0 0 chr17 43223629 43223773 -52048878 - B1_Mm SINE Alu 0 147 4 6 914 375 144 0 26 chr17 43223791 43223905 -52048746 + T-rich Low_complexity Low_complexity 1 111 0 6 914 603 293 30 5 chr17 43224034 43224233 -52048418 + B3 SINE B2 2 205 -11 6 914 311 244 202 34 chr17 43224357 43224368 -52048283 - ID_B1 SINE B4 0 224 217 6 914 188 86 29 0 chr17 43224368 43224403 -52048248 + (TTG)n Simple_repeat Simple_repeat 2 37 0 6 914 311 244 202 34 chr17 43224403 43224510 -52048141 - ID_B1 SINE B4 -8 216 86 6 914 642 26 0 0 chr17 43225043 43225119 -52047532 + (TTTC)n Simple_repeat Simple_repeat 4 79 0 6 914 364 192 183 0 chr17 43226718 43226830 -52045821 + B1_Mus1 SINE Alu 10 149 0 6 914 195 146 104 0 chr17 43227129 43227177 -52045474 - MIRc SINE MIR -110 158 106 6 914 283 297 27 152 chr17 43227188 43227586 -52045065 - ORR1E LTR MaLR -13 366 3 6 914 981 268 27 44 chr17 43228005 43228298 -52044353 + B4A SINE B4 5 292 0 6 914 309 173 4 0 chr17 43228321 43228391 -52044260 + PB1 SINE Alu 41 122 -5 6 914 588 273 25 12 chr17 43228425 43228588 -52044063 + ID_B1 SINE B4 60 224 0 6 914 286 299 48 57 chr17 43229657 43229781 -52042870 - MER5A1 DNA MER1_type -15 151 29 6 914 642 244 81 63 chr17 43229965 43230188 -52042463 + B4A SINE B4 22 248 -44 6 914 392 269 149 0 chr17 43230370 43230504 -52042147 + RMER15 LTR ERVL 422 575 0 6 914 633 276 231 4 chr17 43230737 43230992 -52041659 - ORR1D2 LTR MaLR 0 370 58 6 914 366 157 57 0 chr17 43230997 43231067 -52041584 - ORR1D1 LTR MaLR -2 382 309 6 914 824 165 29 58 chr17 43231090 43231264 -52041387 + B2_Mm2 SINE B2 1 169 -26 6 914 995 200 126 11 chr17 43231296 43231559 -52041092 - ORR1D1 LTR MaLR -81 293 1 6 914 227 300 0 16 chr17 43231917 43231978 -52040673 + (CATATA)n Simple_repeat Simple_repeat 1 60 0 6 914 765 209 22 0 chr17 43231978 43232255 -52040396 + (TA)n Simple_repeat Simple_repeat 1 283 0 6 914 4346 172 47 37 chr17 43232489 43233360 -52039291 + RMER13B LTR ERVK 1 880 -28 6 914 837 144 132 0 chr17 43233919 43234093 -52038558 - URR1A DNA MER1_type -12 214 18 6 914 192 269 115 44 chr17 43234332 43234445 -52038206 - MIRc SINE MIR -85 183 63 6 914 442 316 77 36 chr17 43234602 43234613 -52038038 - B3 SINE B2 -13 203 194 6 914 2745 70 81 0 chr17 43234613 43234983 -52037668 + MTB LTR MaLR 1 400 0 6 914 442 316 77 36 chr17 43234983 43235165 -52037486 - B3 SINE B2 -23 193 2 6 914 7597 24 16 0 chr17 43235173 43236040 -52036611 - L1Md_F3 LINE L1 -14 6570 5690 7 914 598 248 33 53 chr17 43236751 43237013 -52035638 + B4 SINE B4 43 291 -1 7 914 229 267 17 0 chr17 43237058 43237118 -52035533 - L1MD2 LINE L1 -421 5938 5878 7 914 320 308 98 25 chr17 43237119 43237282 -52035369 - L1M5 LINE L1 -648 5796 5622 7 914 1271 224 100 15 chr17 43237283 43237623 -52035028 - ORR1D2 LTR MaLR -1 369 1 7 914 1385 231 57 31 chr17 43237640 43237989 -52034662 + ORR1D2 LTR MaLR 6 363 -7 7 914 679 311 22 25 chr17 43238035 43238309 -52034342 + RMER15 LTR ERVL 276 548 -27 7 914 230 0 33 0 chr17 43238315 43238345 -52034306 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 914 1056 88 0 7 chr17 43238345 43238482 -52034169 - B1_Mm SINE Alu -11 136 1 7 914 1085 240 85 68 chr17 43238526 43238924 -52033727 - MTD LTR MaLR -14 405 1 7 914 843 242 53 64 chr17 43238985 43239378 -52033273 - L1MB1 LINE L1 -185 5983 5595 7 914 939 211 29 19 chr17 43239387 43239595 -52033056 - B3 SINE B2 0 216 7 7 914 407 279 81 60 chr17 43239603 43239727 -52032924 - L1MB1 LINE L1 -592 5597 5482 7 914 198 0 0 0 chr17 43239727 43239749 -52032902 + (CAA)n Simple_repeat Simple_repeat 1 22 0 7 914 407 279 81 60 chr17 43239749 43239872 -52032779 - L1MB1 LINE L1 -708 5481 5345 7 914 366 262 0 12 chr17 43239910 43239991 -52032660 - ID4_ SINE ID -2 81 2 7 914 331 245 18 9 chr17 43240071 43240182 -52032469 - L1MB1 LINE L1 -863 5277 5166 7 914 1258 293 22 19 chr17 43240197 43240251 -52032400 + ORR1D2 LTR MaLR 6 59 -311 7 914 3118 52 23 8 chr17 43240251 43240641 -52032010 - MTA_Mm LTR MaLR 0 396 1 7 914 1258 293 22 19 chr17 43240641 43240945 -52031706 + ORR1D2 LTR MaLR 60 365 -5 7 914 629 224 23 11 chr17 43240949 43241125 -52031526 - L1MB1 LINE L1 -995 5145 4968 7 914 339 359 28 0 chr17 43241437 43241582 -52031069 - RSINE1 SINE B4 -13 152 4 7 914 237 119 0 0 chr17 43242624 43242666 -52029985 + (CCAA)n Simple_repeat Simple_repeat 2 43 0 7 914 583 341 40 11 chr17 43244483 43244756 -52027895 + B4A SINE B4 2 282 -10 7 914 444 37 0 0 chr17 43247056 43247110 -52025541 + (CA)n Simple_repeat Simple_repeat 1 54 0 7 914 528 127 86 60 chr17 43247238 43247355 -52025296 - PB1D9 SINE Alu 0 120 1 7 914 354 100 0 0 chr17 43248024 43248074 -52024577 - URR1B DNA MER1_type -20 205 156 7 914 817 28 0 0 chr17 43248078 43248184 -52024467 - B1_Mm SINE Alu 0 147 42 7 914 775 139 36 14 chr17 43248182 43248321 -52024330 - URR1B DNA MER1_type -79 146 5 7 914 705 309 13 13 chr17 43249380 43249610 -52023041 + B4A SINE B4 1 230 -62 7 914 580 250 115 16 chr17 43249610 43249793 -52022858 + B3 SINE B2 1 201 -15 7 914 201 74 0 0 chr17 43249798 43249825 -52022826 + (ATG)n Simple_repeat Simple_repeat 1 27 0 7 914 649 76 78 20 chr17 43249825 43250082 -52022569 + (TAGA)n Simple_repeat Simple_repeat 1 272 0 7 914 486 0 0 0 chr17 43250082 43250136 -52022515 + (TATAG)n Simple_repeat Simple_repeat 1 54 0 7 914 316 229 163 20 chr17 43250165 43250263 -52022388 + B1_Mur2 SINE Alu 35 146 -3 7 914 405 267 165 15 chr17 43250405 43250538 -52022113 + RSINE1 SINE B4 3 155 -10 7 914 477 266 57 25 chr17 43251034 43251192 -52021459 - RSINE1 SINE B4 0 165 3 7 914 701 210 34 114 chr17 43251797 43252034 -52020617 - ID_B1 SINE B4 -5 219 2 7 914 225 0 0 0 chr17 43252273 43252298 -52020353 + (TTTTG)n Simple_repeat Simple_repeat 5 29 0 7 914 1179 22 7 0 chr17 43252299 43252438 -52020213 - B1_Mus1 SINE Alu -7 141 2 7 914 196 375 25 0 chr17 43252760 43252840 -52019811 + L2b LINE L2 3290 3371 -4 7 914 198 103 0 0 chr17 43253435 43253464 -52019187 + (CAA)n Simple_repeat Simple_repeat 2 30 0 7 915 180 0 0 0 chr17 43254199 43254219 -52018432 + (A)n Simple_repeat Simple_repeat 1 20 0 7 915 217 250 59 0 chr17 43254238 43254306 -52018345 + MIR SINE MIR 43 114 -148 7 915 182 316 57 57 chr17 43254587 43254711 -52017940 - L2b LINE L2 -222 3153 3030 7 915 564 180 0 0 chr17 43255260 43255382 -52017269 + (CA)n Simple_repeat Simple_repeat 2 123 0 7 915 279 0 0 0 chr17 43255382 43255413 -52017238 + (GA)n Simple_repeat Simple_repeat 2 32 0 7 915 725 170 24 0 chr17 43255477 43255642 -52017009 + CT-rich Low_complexity Low_complexity 2 170 0 7 915 1242 48 0 0 chr17 43255657 43255803 -52016848 - B1_Mus1 SINE Alu 0 148 3 7 915 243 0 0 0 chr17 43257511 43257538 -52015113 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 915 715 143 21 57 chr17 43257541 43257682 -52014969 - B1_Mur3 SINE Alu -13 136 1 7 915 347 226 47 78 chr17 43257930 43258185 -52014466 - RMER17C LTR ERVK -163 247 1 7 915 732 251 47 51 chr17 43258258 43258472 -52014179 - B4A SINE B4 -79 213 1 7 915 280 308 46 8 chr17 43258716 43258847 -52013804 + B1F1 SINE Alu 1 136 -13 7 915 486 329 42 50 chr17 43258865 43259022 -52013629 + B4A SINE B4 1 161 -131 7 915 3557 13 5 0 chr17 43259022 43259416 -52013235 - MTA_Mm LTR MaLR 0 396 1 7 915 486 329 42 50 chr17 43259416 43259517 -52013134 + B4A SINE B4 162 257 -35 7 915 279 0 0 0 chr17 43259578 43259609 -52013042 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 7 915 669 167 117 0 chr17 43259609 43259729 -52012922 - B1_Mur4 SINE Alu -13 137 4 7 915 11099 158 20 38 chr17 43259797 43261870 -52010781 + MYSERV16_I-int LTR ERVK 291 2326 0 7 915 1459 230 108 36 chr17 43261877 43262351 -52010300 + RLTR20B3 LTR ERVK 14 521 -56 7 915 456 243 0 61 chr17 43262385 43262499 -52010152 - RSINE1 SINE B4 -32 133 27 7 915 669 144 23 0 chr17 43262827 43262959 -52009692 + (TATG)n Simple_repeat Simple_repeat 2 136 0 7 915 5616 191 77 46 chr17 43263070 43264320 -52008331 - Lx7 LINE L1 -16 7680 6393 7 915 5199 114 37 26 chr17 43264298 43265159 -52007492 - L1_Mur3 LINE L1 -1646 4234 3364 7 915 623 301 30 12 chr17 43265161 43265329 -52007322 + B3A SINE B2 2 172 -26 7 915 959 259 41 45 chr17 43265401 43265753 -52006898 + MTE2a LTR MaLR 23 375 -44 7 915 288 0 0 0 chr17 43265778 43265810 -52006841 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 7 915 513 32 0 0 chr17 43265810 43265873 -52006778 + (TG)n Simple_repeat Simple_repeat 2 64 0 7 915 367 130 0 0 chr17 43265873 43265927 -52006724 - B1_Mus2 SINE Alu -35 112 59 7 915 778 271 76 40 chr17 43266097 43266400 -52006251 - RMER5 LTR ERV1 0 534 221 7 915 500 233 46 8 chr17 43266423 43266553 -52006098 - RMER5 LTR ERV1 -366 168 34 7 915 195 146 0 0 chr17 43266855 43266896 -52005755 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 7 915 285 208 31 10 chr17 43266991 43267088 -52005563 + GA-rich Low_complexity Low_complexity 2 100 0 7 915 2112 194 56 37 chr17 43268111 43268626 -52004025 - RLTR11A LTR ERVK -3 525 1 7 915 270 0 0 0 chr17 43268988 43269018 -52003633 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 7 915 460 286 26 26 chr17 43269029 43269180 -52003471 - RSINE1 SINE B4 -12 153 3 7 915 337 319 36 14 chr17 43269181 43269321 -52003330 - MLT1F LTR MaLR -42 527 385 7 915 1679 242 70 58 chr17 43269325 43269882 -52002769 + RMER2 LTR ERV1 1 564 -3 7 915 372 358 71 16 chr17 43269923 43270151 -52002500 - MLT1F LTR MaLR -268 311 27 7 915 314 262 102 9 chr17 43270216 43270324 -52002327 + ID_B1 SINE B4 95 212 -12 7 915 287 244 141 16 chr17 43270324 43270337 -52002314 + B1F1 SINE Alu 14 149 0 7 915 649 258 19 75 chr17 43270466 43270680 -52001971 - B3 SINE B2 -13 203 2 7 915 342 0 0 0 chr17 43270697 43270735 -52001916 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 915 321 277 120 25 chr17 43270873 43271073 -52001578 - RLTR15 LTR ERVK -69 290 72 7 915 291 200 33 76 chr17 43271146 43271238 -52001413 - RLTR15 LTR ERVK -271 88 1 7 915 2034 52 4 0 chr17 43271736 43271986 -52000665 - L1_Mus1 LINE L1 -4 6563 6313 7 915 298 246 0 0 chr17 43272225 43272290 -52000361 + MER58D DNA MER1_type 299 363 -23 7 915 204 274 8 0 chr17 43273131 43273201 -51999450 - MIR SINE MIR -82 186 110 7 915 375 270 153 34 chr17 43273383 43273651 -51999000 + Lx8 LINE L1 7163 7462 -11 7 915 624 358 82 12 chr17 43274123 43274550 -51998101 + MLT2B1 LTR ERVL 1 457 -63 7 915 765 230 10 62 chr17 43274552 43274761 -51997890 + B3A SINE B2 1 198 0 7 915 227 341 8 60 chr17 43275026 43275160 -51997491 + MER45A DNA Tip100 1 127 -51 7 915 234 0 0 0 chr17 43275322 43275348 -51997303 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 915 429 294 83 19 chr17 43275719 43275875 -51996776 + Lx8 LINE L1 7130 7295 -178 7 915 285 29 0 0 chr17 43275916 43275950 -51996701 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 915 297 0 0 0 chr17 43275950 43275982 -51996669 + (GA)n Simple_repeat Simple_repeat 2 34 0 7 915 27 0 0 0 chr17 43275982 43276009 -51996642 + AT_rich Low_complexity Low_complexity 1 27 0 7 915 249 33 0 0 chr17 43276382 43276412 -51996239 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 915 333 109 0 0 chr17 43276614 43276660 -51995991 + B1_Mus1 SINE Alu 11 56 -92 7 915 27 0 0 0 chr17 43277444 43277471 -51995180 + AT_rich Low_complexity Low_complexity 1 27 0 7 915 603 269 141 12 chr17 43277485 43277741 -51994910 + B4A SINE B4 2 290 -2 7 915 342 115 0 0 chr17 43277747 43277799 -51994852 + (CA)n Simple_repeat Simple_repeat 1 52 0 7 915 2211 31 0 0 chr17 43278272 43278526 -51994125 - L1Md_F2 LINE L1 -237 6345 6092 7 915 1413 50 0 0 chr17 43278526 43278708 -51993943 + L1Md_F2 LINE L1 6401 6582 0 7 915 214 284 40 65 chr17 43278740 43278864 -51993787 + MIR3 SINE MIR 82 202 -6 7 915 192 179 0 0 chr17 43279517 43279556 -51993095 + (CCG)n Simple_repeat Simple_repeat 2 40 0 7 915 581 218 116 27 chr17 43280248 43280394 -51992257 + B3A SINE B2 1 159 -39 7 915 195 333 0 0 chr17 43280582 43280651 -51992000 - MIR SINE MIR -21 241 173 7 915 762 241 55 0 chr17 43281012 43281211 -51991440 - B3 SINE B2 -3 213 4 7 915 286 312 88 19 chr17 43281282 43281442 -51991209 + L1M5 LINE L1 5669 5839 -401 7 915 770 225 75 27 chr17 43281450 43281637 -51991014 + B3A SINE B2 2 197 -1 7 915 3242 36 5 0 chr17 43281690 43282081 -51990570 + L1Md_F2 LINE L1 6190 6582 0 8 915 257 237 0 17 chr17 43282583 43282643 -51990008 - B3A SINE B2 -139 59 1 8 915 503 327 59 33 chr17 43283043 43283343 -51989308 + ORR1E LTR MaLR 3 297 -73 8 915 1387 264 100 51 chr17 43283714 43284083 -51988568 - Lx8 LINE L1 -5 7468 7065 8 915 1985 164 17 3 chr17 43284083 43284437 -51988214 - RLTR15 LTR ERVK 0 359 1 8 915 1387 264 100 51 chr17 43284437 43284598 -51988053 - Lx8 LINE L1 -409 7064 6912 8 915 2061 186 120 43 chr17 43285505 43285955 -51986696 + MT2A LTR ERVL 2 488 -45 8 915 933 133 0 0 chr17 43285955 43286113 -51986538 + (CA)n Simple_repeat Simple_repeat 1 158 0 8 915 2061 186 120 43 chr17 43286113 43286152 -51986499 + MT2A LTR ERVL 489 529 -4 8 915 401 313 23 8 chr17 43286156 43286288 -51986363 + B3A SINE B2 63 196 -2 8 915 268 287 69 10 chr17 43286317 43286419 -51986232 - L1MD1 LINE L1 -91 6268 6161 8 915 222 220 20 0 chr17 43286478 43286528 -51986123 - ID4 SINE ID -30 53 3 8 915 286 311 24 16 chr17 43286539 43286663 -51985988 - B1F SINE Alu -21 128 4 8 915 569 250 110 28 chr17 43286707 43286996 -51985655 + MTD LTR MaLR 42 408 -11 8 915 1091 288 109 15 chr17 43287057 43287600 -51985051 - L1MD1 LINE L1 -209 6033 5440 8 915 228 286 0 0 chr17 43287608 43287664 -51984987 + (TG)n Simple_repeat Simple_repeat 1 56 0 8 915 534 260 109 7 chr17 43287664 43287849 -51984802 - B3A SINE B2 -13 203 1 8 915 394 250 95 17 chr17 43287850 43288029 -51984622 - L1MD1 LINE L1 -909 5450 5258 8 915 740 312 33 4 chr17 43288508 43288778 -51983873 + B4A SINE B4 3 280 -12 8 915 365 39 20 0 chr17 43288790 43288841 -51983810 + (CA)n Simple_repeat Simple_repeat 1 52 0 8 915 385 346 35 4 chr17 43289162 43289391 -51983260 + HERV16-int LTR ERVL 196 431 -4565 8 915 198 0 0 0 chr17 43289589 43289611 -51983040 + (T)n Simple_repeat Simple_repeat 1 22 0 8 915 1297 225 92 31 chr17 43289688 43290037 -51982614 - ORR1D2 LTR MaLR 0 370 1 8 915 252 347 96 23 chr17 43291159 43291377 -51981274 + ERVL-int LTR ERVL 2021 2254 -3503 8 915 364 113 16 0 chr17 43291570 43291632 -51981019 - ORR1A2 LTR MaLR -264 63 1 8 915 3410 126 19 31 chr17 43291608 43292208 -51980443 - ORR1A2-int LTR MaLR 0 1963 1367 8 915 1604 182 23 7 chr17 43292208 43292512 -51980139 - RLTR27 LTR ERVK 0 309 1 8 915 1637 109 0 0 chr17 43292512 43292753 -51979898 - ORR1A2-int LTR MaLR -566 1397 1157 8 915 830 284 214 22 chr17 43293052 43293509 -51979142 + Lx8 LINE L1 6928 7472 -1 8 915 668 261 93 11 chr17 43294025 43294207 -51978444 - B3A SINE B2 0 198 2 8 915 25 31 0 0 chr17 43294225 43294257 -51978394 + AT_rich Low_complexity Low_complexity 1 32 0 8 915 198 71 0 0 chr17 43294257 43294285 -51978366 + (TG)n Simple_repeat Simple_repeat 2 29 0 8 915 216 135 0 0 chr17 43294542 43294579 -51978072 + (GAAA)n Simple_repeat Simple_repeat 3 39 0 8 915 29 0 0 0 chr17 43295612 43295641 -51977010 + AT_rich Low_complexity Low_complexity 1 29 0 8 915 369 269 14 75 chr17 43296007 43296149 -51976502 - MER5A DNA MER1_type -56 133 2 8 915 227 275 21 64 chr17 43296190 43296330 -51976321 - RLTR41 LTR ERV1 -62 384 251 8 915 238 331 31 8 chr17 43296829 43296957 -51975694 + MIRb SINE MIR 7 137 -131 8 915 442 255 0 10 chr17 43297098 43297201 -51975450 + RSINE1 SINE B4 2 103 -62 8 915 324 0 0 0 chr17 43297252 43297288 -51975363 + (CA)n Simple_repeat Simple_repeat 1 36 0 8 915 528 16 0 0 chr17 43297288 43297348 -51975303 + (GA)n Simple_repeat Simple_repeat 2 62 0 8 915 6129 132 21 10 chr17 43297986 43298215 -51974436 - L1_Mur2 LINE L1 -123 5754 5529 8 915 1228 184 39 69 chr17 43298215 43298547 -51974104 - RLTRETN_Mm LTR ERVK 0 322 1 8 915 6129 132 21 10 chr17 43298547 43299299 -51973352 - L1_Mur2 LINE L1 -349 5528 4762 8 915 6766 153 59 44 chr17 43299289 43299507 -51973144 + Lx5 LINE L1 5767 6001 -1049 8 915 3066 89 2 7 chr17 43299507 43299914 -51972737 - MTB_Mm LTR MaLR 0 407 3 8 915 6766 153 59 44 chr17 43299914 43300960 -51971691 + Lx5 LINE L1 6002 7050 0 8 915 341 197 12 35 chr17 43301164 43301335 -51971316 + (TG)n Simple_repeat Simple_repeat 1 166 0 8 915 345 288 62 48 chr17 43301979 43302125 -51970526 + MLT1I LTR MaLR 60 207 -204 8 915 276 287 0 11 chr17 43302332 43302420 -51970231 + ID_B1 SINE B4 84 170 -54 8 915 252 0 0 0 chr17 43302421 43302449 -51970202 + (TG)n Simple_repeat Simple_repeat 1 28 0 8 915 894 122 0 0 chr17 43302449 43302628 -51970023 + (GA)n Simple_repeat Simple_repeat 1 180 0 8 915 238 287 91 65 chr17 43302692 43302878 -51969773 + L1M5 LINE L1 3588 3778 -2368 8 915 960 228 14 56 chr17 43303041 43303325 -51969326 + MTD LTR MaLR 24 295 -124 8 915 1174 131 11 0 chr17 43303347 43303523 -51969128 + B2_Mm1t SINE B2 2 179 -14 8 915 326 147 277 25 chr17 43303536 43303655 -51968996 + B2_Mm2 SINE B2 47 195 0 8 915 259 136 28 3 chr17 43303682 43303736 -51968915 + MTD LTR MaLR 343 398 -23 8 915 237 185 0 0 chr17 43304096 43304161 -51968490 + (CAGA)n Simple_repeat Simple_repeat 3 67 0 8 915 348 274 0 79 chr17 43304182 43304309 -51968342 - PB1D10 SINE Alu 0 117 1 8 915 456 19 0 0 chr17 43304432 43304485 -51968166 + (TTA)n Simple_repeat Simple_repeat 2 54 0 8 915 240 161 0 0 chr17 43304900 43304962 -51967689 + (TG)n Simple_repeat Simple_repeat 2 63 0 8 915 643 286 0 19 chr17 43304963 43305120 -51967531 - RSINE1 SINE B4 0 165 12 8 915 241 301 32 21 chr17 43305437 43305532 -51967119 + B4 SINE B4 2 97 -195 8 915 540 0 0 0 chr17 43305721 43305781 -51966870 + (CA)n Simple_repeat Simple_repeat 1 60 0 8 915 711 234 174 0 chr17 43306016 43306200 -51966451 - ID_B1 SINE B4 -7 217 2 8 915 1350 98 16 0 chr17 43306660 43306844 -51965807 - B2_Mm2 SINE B2 -8 187 1 8 915 951 231 189 13 chr17 43307481 43307793 -51964858 - ORR1D2 LTR MaLR -2 368 2 8 915 1122 164 6 101 chr17 43308743 43309185 -51963466 - RMER17C LTR ERVK 0 410 82 8 915 486 39 156 0 chr17 43309185 43309262 -51963389 - L1_Mus1 LINE L1 -2 6565 6477 8 915 795 131 7 161 chr17 43309262 43309343 -51963308 - RMER17C LTR ERVK -329 81 1 8 915 182 37 37 0 chr17 43309626 43309653 -51962998 + (TC)n Simple_repeat Simple_repeat 2 29 0 8 915 290 245 58 83 chr17 43310263 43310383 -51962268 - B4A SINE B4 -173 119 3 8 915 939 78 0 0 chr17 43310557 43310686 -51961965 + (TTCC)n Simple_repeat Simple_repeat 3 131 0 8 915 569 270 51 0 chr17 43311030 43311167 -51961484 + B3A SINE B2 17 160 -38 8 915 447 78 0 0 chr17 43311172 43311236 -51961415 + (CA)n Simple_repeat Simple_repeat 1 64 0 8 915 234 196 22 0 chr17 43312496 43312542 -51960109 + L1M5 LINE L1 5722 5768 -356 8 915 800 150 57 7 chr17 43312655 43312796 -51959855 - B1_Mur4 SINE Alu -2 148 1 8 915 278 259 16 82 chr17 43312821 43312943 -51959708 - Lx8 LINE L1 -2 7471 7358 8 915 498 136 51 6 chr17 43312955 43313111 -51959540 + (TA)n Simple_repeat Simple_repeat 1 163 0 8 915 443 324 137 5 chr17 43313111 43313316 -51959335 - Lx8 LINE L1 -173 7300 7069 8 915 25 51 0 0 chr17 43313549 43313588 -51959063 + AT_rich Low_complexity Low_complexity 1 39 0 8 915 238 250 0 18 chr17 43313712 43313769 -51958882 - L1Md_F3 LINE L1 -332 6252 6197 8 915 957 191 128 0 chr17 43313838 43314026 -51958625 + B3 SINE B2 3 214 -2 8 915 22953 107 4 11 chr17 43314884 43318262 -51954389 + L1_Mus1 LINE L1 1594 4946 -937 8 915 42039 4 0 0 chr17 43318260 43324831 -51947820 - L1Md_A LINE L1 0 6582 12 8 915 7723 79 13 0 chr17 43324830 43326453 -51946198 + L1_Mus1 LINE L1 4921 6565 -2 8 915 407 263 34 26 chr17 43327746 43327863 -51944788 - PB1D9 SINE Alu -1 119 2 8 915 535 294 11 53 chr17 43328570 43328760 -51943891 - B3 SINE B2 -33 183 2 8 915 308 24 24 0 chr17 43328763 43328804 -51943847 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 8 915 290 286 0 13 chr17 43328816 43328894 -51943757 - B4 SINE B4 -72 220 144 8 915 437 219 9 0 chr17 43328928 43329042 -51943609 + CT-rich Low_complexity Low_complexity 4 118 0 8 915 1221 106 0 0 chr17 43329829 43330009 -51942642 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 8 915 698 0 0 12 chr17 43330013 43330096 -51942555 + (TCCCC)n Simple_repeat Simple_repeat 3 84 0 8 915 711 0 0 0 chr17 43330096 43330174 -51942477 + (TTTTC)n Simple_repeat Simple_repeat 3 81 0 8 915 2114 145 9 0 chr17 43330817 43331141 -51941510 - ORR1A2 LTR MaLR 0 327 1 8 915 229 233 13 27 chr17 43331181 43331256 -51941395 - MLT1A1 LTR MaLR 0 408 335 8 915 1584 57 14 5 chr17 43331303 43331514 -51941137 + L1Md_F2 LINE L1 6370 6582 0 8 915 227 244 62 37 chr17 43331883 43331964 -51940687 + Lx8 LINE L1 5824 5906 -1567 8 915 373 302 17 8 chr17 43332048 43332165 -51940486 + B3A SINE B2 45 162 -36 8 915 396 0 0 0 chr17 43332171 43332215 -51940436 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 915 232 319 50 25 chr17 43332224 43332343 -51940308 - L1MCa LINE L1 -6149 359 238 8 915 831 265 122 19 chr17 43332634 43332896 -51939755 + MTD LTR MaLR 74 362 -57 8 915 1847 103 26 80 chr17 43332896 43333235 -51939416 + ORR1A4 LTR MaLR 1 321 -8 8 915 1336 215 87 42 chr17 43333308 43333711 -51938940 + RMER16 LTR ERVK 113 533 0 8 915 12885 149 31 39 chr17 43333711 43334693 -51937958 + RMER16-int LTR ERVK 1 989 -4417 8 915 1289 108 38 0 chr17 43334693 43334879 -51937772 - B2_Mm2 SINE B2 -2 193 1 8 915 12885 149 31 39 chr17 43334879 43334906 -51937745 + RMER16-int LTR ERVK 990 1006 -4400 8 915 7666 71 26 7 chr17 43334906 43335910 -51936741 - RLTR13D5 LTR ERVK 0 1023 1 8 915 12885 137 67 27 chr17 43335910 43337802 -51934849 + RMER16-int LTR ERVK 1007 2971 -2435 8 915 845 178 12 6 chr17 43337802 43337972 -51934679 + RMER16 LTR ERVK 363 533 0 8 915 229 290 58 0 chr17 43338134 43338203 -51934448 - MLT1A0 LTR MaLR -289 76 4 8 915 39 0 0 0 chr17 43338568 43338607 -51934044 + AT_rich Low_complexity Low_complexity 1 39 0 8 915 635 256 36 43 chr17 43338617 43338835 -51933816 - LTRIS4 LTR ERV1 0 587 285 8 915 566 291 46 6 chr17 43339997 43340170 -51932481 + B4A SINE B4 107 286 -6 8 915 239 0 32 0 chr17 43340473 43340504 -51932147 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 8 915 444 289 41 29 chr17 43340504 43340675 -51931976 - B3A SINE B2 -21 177 5 8 915 319 336 67 0 chr17 43340687 43340836 -51931815 + L1MCa LINE L1 388 546 -5962 8 915 25 51 0 0 chr17 43340891 43340930 -51931721 + AT_rich Low_complexity Low_complexity 1 39 0 9 915 857 188 145 0 chr17 43340930 43341116 -51931535 - B3 SINE B2 -3 213 1 9 915 706 228 22 72 chr17 43341126 43341206 -51931445 + L1MCa LINE L1 738 820 -5688 8 915 189 0 0 0 chr17 43341206 43341227 -51931424 + (G)n Simple_repeat Simple_repeat 1 21 0 9 915 706 228 22 72 chr17 43341227 43341326 -51931325 + L1MCa LINE L1 821 908 -5600 8 915 2313 101 0 58 chr17 43341337 43341684 -51930967 + ORR1A2 LTR MaLR 1 327 0 9 915 729 282 92 50 chr17 43342118 43342476 -51930175 - L1M2 LINE L1 -860 5283 4911 9 915 1243 219 117 6 chr17 43342711 43343037 -51929614 - ORR1D2 LTR MaLR -8 362 1 9 915 1443 231 52 25 chr17 43344716 43344781 -51927870 - MTD LTR MaLR -4 415 355 9 915 2525 147 116 11 chr17 43344781 43345256 -51927395 + RLTR11A LTR ERVK 2 526 -2 9 915 1443 231 52 25 chr17 43345256 43345594 -51927057 - MTD LTR MaLR -65 354 1 9 915 38 61 0 0 chr17 43345708 43345774 -51926877 + AT_rich Low_complexity Low_complexity 1 66 0 9 915 212 250 83 40 chr17 43347534 43347640 -51925011 - MIRc SINE MIR -110 158 42 9 915 265 333 0 0 chr17 43347932 43348007 -51924644 + PB1D10 SINE Alu 1 75 -42 9 915 2223 115 18 9 chr17 43348034 43348360 -51924291 + ORR1A4 LTR MaLR 1 329 0 9 915 1289 73 6 0 chr17 43348571 43348749 -51923902 + (TTCTC)n Simple_repeat Simple_repeat 2 180 0 9 915 412 287 22 14 chr17 43348749 43348887 -51923764 - ID_B1 SINE B4 -6 218 80 9 915 657 201 145 21 chr17 43349037 43349230 -51923421 + RMER5 LTR ERV1 3 219 -315 9 915 2264 217 79 106 chr17 43349238 43350171 -51922480 + RMER17B LTR ERVK 1 908 -50 9 915 510 228 79 0 chr17 43350323 43350450 -51922201 + B1_Mur1 SINE Alu 1 137 -12 9 915 1619 209 73 16 chr17 43350457 43350842 -51921809 - MTD LTR MaLR -12 407 1 9 915 183 80 0 0 chr17 43350848 43350873 -51921778 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 9 915 247 241 74 0 chr17 43350884 43350938 -51921713 + RSINE1 SINE B4 108 165 0 9 915 224 190 38 12 chr17 43350941 43351021 -51921630 + (CA)n Simple_repeat Simple_repeat 1 82 0 9 915 894 277 92 64 chr17 43351432 43351821 -51920830 + MTD LTR MaLR 18 417 -2 9 915 22 0 0 0 chr17 43352265 43352287 -51920364 + AT_rich Low_complexity Low_complexity 1 22 0 9 915 258 32 0 0 chr17 43352293 43352324 -51920327 + (ATTG)n Simple_repeat Simple_repeat 2 32 0 9 915 1149 89 0 0 chr17 43352324 43352463 -51920188 - B1_Mus1 SINE Alu -7 141 3 9 915 189 107 0 0 chr17 43352579 43352607 -51920044 + (TAA)n Simple_repeat Simple_repeat 3 30 0 9 915 348 284 128 0 chr17 43352625 43352734 -51919917 + ID_B1 SINE B4 102 224 0 9 915 1384 258 33 6 chr17 43352735 43353094 -51919557 + Lx9 LINE L1 7061 7429 -215 9 915 388 320 66 0 chr17 43353374 43353496 -51919155 + ID_B1 SINE B4 87 216 -8 9 915 1209 135 5 20 chr17 43353662 43353859 -51918792 + B2_Mm2 SINE B2 2 195 0 9 915 767 206 0 14 chr17 43355182 43355325 -51917326 - B1_Mus1 SINE Alu -6 142 2 9 915 496 312 87 14 chr17 43355351 43355559 -51917092 - B4A SINE B4 -5 287 65 9 915 318 309 9 9 chr17 43356928 43357036 -51915615 - MLT1C LTR MaLR -23 444 337 9 915 564 221 156 24 chr17 43357154 43357321 -51915330 - MTD LTR MaLR 0 419 231 9 915 666 289 47 118 chr17 43357343 43357553 -51915098 - RLTR11A2 LTR ERVK -53 515 292 9 915 2452 114 5 64 chr17 43357553 43357976 -51914675 - RMER10B LTR ERVL 0 398 1 9 915 666 279 44 121 chr17 43357976 43358288 -51914363 - RLTR11A2 LTR ERVK -236 291 5 9 915 551 235 122 77 chr17 43358291 43358416 -51914235 - MTD LTR MaLR -181 238 101 9 915 2028 152 40 68 chr17 43358416 43358811 -51913840 - ORR1C2 LTR MaLR 0 384 1 9 915 551 235 122 77 chr17 43358811 43358871 -51913780 - MTD LTR MaLR -319 100 35 9 915 1284 210 137 66 chr17 43358871 43359264 -51913387 + MTC LTR MaLR 1 421 0 9 915 551 235 122 77 chr17 43359264 43359298 -51913353 - MTD LTR MaLR -385 34 8 9 915 725 280 15 36 chr17 43359598 43359794 -51912857 + B3A SINE B2 3 194 -4 9 915 919 216 131 69 chr17 43360370 43360644 -51912007 + B4 SINE B4 2 292 0 9 915 351 0 0 0 chr17 43361972 43362011 -51910640 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 9 915 1664 185 66 34 chr17 43362014 43362092 -51910559 - RMER10A LTR ERVL -20 422 345 9 915 528 30 0 0 chr17 43362092 43362158 -51910493 + (GA)n Simple_repeat Simple_repeat 2 67 0 9 915 1664 185 66 34 chr17 43362158 43362488 -51910163 - RMER10A LTR ERVL -98 344 3 9 915 546 43 0 0 chr17 43362632 43362701 -51909950 + (CA)n Simple_repeat Simple_repeat 2 70 0 9 915 1703 50 36 5 chr17 43362734 43362955 -51909696 + L1Md_A LINE L1 6355 6582 0 9 915 409 110 27 0 chr17 43364180 43364253 -51908398 + (TCC)n Simple_repeat Simple_repeat 3 77 0 9 915 423 0 0 0 chr17 43364339 43364386 -51908265 + (TG)n Simple_repeat Simple_repeat 1 47 0 9 915 315 0 0 0 chr17 43364386 43364420 -51908231 + (GA)n Simple_repeat Simple_repeat 1 35 0 9 915 398 284 12 47 chr17 43364522 43364692 -51907959 - RSINE1 SINE B4 0 165 2 9 915 828 249 24 37 chr17 43364692 43364920 -51907731 - B4A SINE B4 -63 229 5 9 915 186 311 118 26 chr17 43364935 43365087 -51907564 - MIR SINE MIR -89 173 8 9 915 206 318 16 0 chr17 43365844 43365907 -51906744 + L2c LINE L2 3243 3306 -81 9 915 473 307 7 14 chr17 43367325 43367467 -51905184 + B1F1 SINE Alu 1 141 -8 9 915 736 173 0 0 chr17 43367508 43367635 -51905016 + B1_Mur1 SINE Alu 9 135 -14 9 915 618 14 0 0 chr17 43367639 43367710 -51904941 + (GGA)n Simple_repeat Simple_repeat 3 73 0 9 915 272 238 0 12 chr17 43368207 43368292 -51904359 + (TA)n Simple_repeat Simple_repeat 2 85 0 9 915 314 376 58 39 chr17 43369061 43369318 -51903333 - MLT1F LTR MaLR -284 264 3 9 915 270 266 23 25 chr17 43369354 43369441 -51903210 + B4 SINE B4 1 86 -206 9 915 23 33 0 0 chr17 43369641 43369671 -51902980 + AT_rich Low_complexity Low_complexity 1 30 0 9 915 221 270 0 10 chr17 43370351 43370452 -51902199 + CT-rich Low_complexity Low_complexity 3 102 0 9 915 456 19 0 0 chr17 43370484 43370537 -51902114 + (CA)n Simple_repeat Simple_repeat 2 54 0 9 915 726 12 0 0 chr17 43370537 43370619 -51902032 + (GA)n Simple_repeat Simple_repeat 2 84 0 9 915 218 272 67 74 chr17 43370836 43370971 -51901680 + B4 SINE B4 73 206 -86 9 915 385 323 15 0 chr17 43370862 43370992 -51901659 + B1F SINE Alu 6 137 -12 9 915 426 20 0 0 chr17 43370992 43371043 -51901608 + (CAAAA)n Simple_repeat Simple_repeat 4 54 0 9 915 22 0 0 0 chr17 43371152 43371174 -51901477 + AT_rich Low_complexity Low_complexity 1 22 0 9 915 257 294 38 38 chr17 43371279 43371385 -51901266 + B1F1 SINE Alu 36 141 -8 9 915 265 317 0 12 chr17 43371400 43371483 -51901168 + ID4_ SINE ID 2 83 0 9 915 2216 163 0 37 chr17 43372520 43372928 -51899723 + Lx4B LINE L1 6666 7058 0 9 915 224 365 0 30 chr17 43372981 43373080 -51899571 + MIRm SINE MIR 50 145 -131 9 915 788 222 75 37 chr17 43373448 43373635 -51899016 - B3A SINE B2 -3 195 2 9 915 377 282 16 0 chr17 43374074 43374198 -51898453 + B4A SINE B4 1 126 -166 9 915 256 271 78 78 chr17 43374589 43374705 -51897946 - B1F1 SINE Alu -1 148 33 9 915 225 0 0 0 chr17 43374716 43374741 -51897910 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 9 915 335 234 0 0 chr17 43374749 43374826 -51897825 + B3A SINE B2 1 77 -121 9 915 360 0 0 0 chr17 43375883 43375923 -51896728 + (GA)n Simple_repeat Simple_repeat 1 40 0 9 915 867 210 18 27 chr17 43376039 43376259 -51896392 - ID_B1 SINE B4 -5 219 2 9 915 483 307 89 11 chr17 43376277 43376468 -51896183 - MER21B LTR ERV1 -424 439 234 9 915 308 254 0 0 chr17 43376945 43377012 -51895639 + PB1D10 SINE Alu 44 110 -7 9 915 690 283 128 42 chr17 43377561 43377874 -51894777 + MLT1A0 LTR MaLR 23 362 -3 9 915 224 319 0 0 chr17 43378560 43378632 -51894019 + MIR SINE MIR 23 94 -168 9 915 481 278 149 16 chr17 43378907 43379101 -51893550 - Lx8 LINE L1 -55 7418 7199 9 915 829 301 17 34 chr17 43379148 43379444 -51893207 - B4A SINE B4 0 292 2 9 915 342 0 0 0 chr17 43379639 43379677 -51892974 + (CA)n Simple_repeat Simple_repeat 1 38 0 9 915 458 221 1 31 chr17 43379912 43380048 -51892603 - B1F2 SINE Alu -18 131 1 9 915 354 308 58 0 chr17 43380334 43380454 -51892197 + ID_B1 SINE B4 1 127 -97 9 915 2546 24 3 3 chr17 43380567 43380866 -51891785 - L1Md_F3 LINE L1 0 6584 6286 9 915 339 253 11 22 chr17 43381401 43381490 -51891161 + MTEb LTR MaLR 41 128 -251 9 915 904 261 13 4 chr17 43381668 43381907 -51890744 + MTEb LTR MaLR 139 379 0 9 915 1476 196 116 6 chr17 43382026 43382380 -51890271 + MTD LTR MaLR 13 405 -14 9 915 254 311 76 19 chr17 43382402 43382507 -51890144 + MLT1B LTR MaLR 5 115 -464 9 915 447 267 189 73 chr17 43382583 43382858 -51889793 + MLT1B LTR MaLR 84 390 0 9 915 742 288 132 19 chr17 43382871 43383039 -51889612 - MLT1A LTR MaLR -12 362 174 9 915 600 14 0 0 chr17 43383039 43383108 -51889543 + (GA)n Simple_repeat Simple_repeat 1 69 0 9 915 742 288 132 19 chr17 43383108 43383264 -51889387 - MLT1A LTR MaLR -201 173 1 9 915 393 317 79 37 chr17 43383264 43383454 -51889197 + MLT1G3 LTR MaLR 112 309 -286 9 915 339 25 0 0 chr17 43384200 43384240 -51888411 + (TTTTA)n Simple_repeat Simple_repeat 3 42 0 9 915 464 192 129 11 chr17 43384241 43384358 -51888293 - B1F SINE Alu -10 139 8 9 915 186 282 56 45 chr17 43384382 43384471 -51888180 - MIR SINE MIR -1 261 172 9 916 466 284 156 40 chr17 43384920 43385221 -51887430 + L1MB1 LINE L1 5790 6125 -64 9 916 422 301 13 27 chr17 43385225 43385375 -51887276 + RSINE1 SINE B4 2 149 -16 9 916 808 250 137 20 chr17 43385422 43385671 -51886980 - MTD LTR MaLR -15 404 127 9 916 238 156 44 0 chr17 43385726 43385771 -51886880 + L1MB1 LINE L1 6122 6168 0 9 916 291 54 0 0 chr17 43386009 43386046 -51886605 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 9 916 426 278 121 43 chr17 43386110 43386366 -51886285 + B4A SINE B4 1 276 -16 1 916 459 318 0 20 chr17 43387099 43387250 -51885401 + B1F SINE Alu 1 148 -1 1 916 953 132 0 6 chr17 43387386 43387554 -51885097 + (TAGA)n Simple_repeat Simple_repeat 2 168 0 1 916 464 279 0 24 chr17 43387554 43387679 -51884972 + B1F SINE Alu 1 122 -27 1 916 1011 73 0 0 chr17 43387681 43387818 -51884833 + B1_Mm SINE Alu 11 147 0 1 916 525 16 0 0 chr17 43387870 43387932 -51884719 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 916 215 79 0 26 chr17 43389378 43389417 -51883234 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 1 916 383 98 16 0 chr17 43389459 43389520 -51883131 + (TCCCC)n Simple_repeat Simple_repeat 1 62 0 1 916 447 35 0 0 chr17 43389791 43389848 -51882803 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 916 570 252 0 30 chr17 43389867 43390002 -51882649 - RSINE1 SINE B4 -31 134 4 1 916 219 211 0 0 chr17 43390120 43390158 -51882493 - ID4 SINE ID -24 59 22 1 916 596 308 21 0 chr17 43390291 43390434 -51882217 + RSINE1 SINE B4 5 150 -15 1 916 328 200 0 73 chr17 43391502 43391626 -51881025 - MER33 DNA MER1_type -42 282 168 1 916 563 273 65 79 chr17 43391652 43391867 -51880784 + B3 SINE B2 5 216 0 1 916 311 256 169 110 chr17 43391905 43392177 -51880474 + B4A SINE B4 5 292 0 1 916 437 264 23 0 chr17 43392204 43392333 -51880318 + L1MD LINE L1 3666 3797 -2349 1 916 430 338 13 0 chr17 43392429 43392586 -51880065 - RSINE1 SINE B4 -4 161 3 1 916 336 313 35 9 chr17 43392881 43392997 -51879654 - B1F1 SINE Alu -30 119 1 1 916 263 275 12 24 chr17 43393010 43393092 -51879559 - ID SINE ID -140 84 4 1 916 306 0 0 0 chr17 43393094 43393128 -51879523 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 916 537 144 0 0 chr17 43393128 43393246 -51879405 + (GA)n Simple_repeat Simple_repeat 2 119 0 1 916 968 253 99 10 chr17 43393625 43393917 -51878734 + ORR1E LTR MaLR 25 342 -17 1 916 23 33 0 0 chr17 43395317 43395347 -51877304 + AT_rich Low_complexity Low_complexity 1 30 0 1 916 491 149 0 9 chr17 43395394 43395502 -51877149 + (TCTA)n Simple_repeat Simple_repeat 4 110 0 1 916 1102 67 0 0 chr17 43395516 43395651 -51877000 + B1_Mus1 SINE Alu 1 135 -13 1 916 978 107 12 6 chr17 43395666 43395835 -51876816 + (GAAA)n Simple_repeat Simple_repeat 2 171 0 1 916 342 211 53 0 chr17 43395876 43395990 -51876661 + (TA)n Simple_repeat Simple_repeat 1 120 0 1 916 751 251 59 36 chr17 43396032 43396251 -51876400 - B4A SINE B4 -68 224 1 1 916 1694 140 124 13 chr17 43396263 43396731 -51875920 - RLTR11A2 LTR ERVK -7 520 1 1 916 339 305 59 30 chr17 43396733 43396868 -51875783 - B1F1 SINE Alu -1 148 10 1 916 585 312 64 63 chr17 43397351 43397872 -51874779 + MLT2B4 LTR ERVL 7 507 -8 1 916 257 290 27 99 chr17 43398446 43398557 -51874094 - MTE2a LTR MaLR -258 121 19 1 916 316 283 27 80 chr17 43398575 43398725 -51873926 - L1M4 LINE L1 -425 5753 5612 1 916 384 22 0 0 chr17 43398864 43398909 -51873742 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 916 1369 246 34 8 chr17 43398938 43399291 -51873360 + ORR1D2 LTR MaLR 1 362 -8 1 916 4567 254 26 53 chr17 43399309 43400552 -51872099 + ORR1D2-int LTR MaLR 16 1210 -160 1 916 338 0 24 0 chr17 43400552 43400594 -51872057 + (TGG)n Simple_repeat Simple_repeat 2 44 0 1 916 4567 254 26 53 chr17 43400594 43400743 -51871908 + ORR1D2-int LTR MaLR 1211 1369 -1 1 916 361 121 17 0 chr17 43400743 43400801 -51871850 + ORR1D2 LTR MaLR 1 59 -311 1 916 481 210 208 117 chr17 43400807 43401115 -51871536 + RMER17C LTR ERVK 14 349 -61 1 916 536 307 119 0 chr17 43401123 43401367 -51871284 + ORR1D2 LTR MaLR 94 366 -4 1 916 639 303 91 5 chr17 43401668 43401887 -51870764 - MER102b DNA MER1_type -103 238 1 1 916 184 320 55 55 chr17 43402012 43402121 -51870530 + L2c LINE L2 3278 3386 -1 1 916 284 125 21 0 chr17 43402900 43402948 -51869703 + MIRm SINE MIR 120 168 -108 1 916 270 232 2 0 chr17 43403145 43403202 -51869449 - B1F2 SINE Alu -51 66 9 1 916 1122 107 209 0 chr17 43403311 43403498 -51869153 - URR1A DNA MER1_type 0 226 1 1 916 246 266 0 0 chr17 43403621 43403685 -51868966 - MTE2b LTR MaLR -3 376 313 1 916 779 235 40 0 chr17 43403686 43403886 -51868765 + B3 SINE B2 9 216 0 1 916 211 286 231 28 chr17 43403957 43404065 -51868586 - ID_B1 SINE B4 -9 215 86 1 916 333 202 34 0 chr17 43404125 43404214 -51868437 + B3A SINE B2 69 160 -38 1 916 528 157 96 32 chr17 43405107 43405232 -51867419 - B1F1 SINE Alu -15 134 2 1 916 548 283 30 36 chr17 43406011 43406176 -51866475 - ID_B1 SINE B4 -3 221 58 1 916 396 0 0 0 chr17 43406190 43406234 -51866417 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 916 638 73 21 0 chr17 43406235 43406331 -51866320 + (TATG)n Simple_repeat Simple_repeat 1 98 0 1 916 509 217 67 0 chr17 43406338 43406458 -51866193 - B1F SINE Alu -21 128 1 1 916 471 195 38 75 chr17 43407830 43407963 -51864688 - ID_B1 SINE B4 -5 219 92 1 916 541 262 8 0 chr17 43408206 43408328 -51864323 + ID_B1 SINE B4 84 206 -18 1 916 218 328 93 42 chr17 43408438 43408556 -51864095 + RSINE1 SINE B4 20 143 -22 1 916 244 236 0 18 chr17 43408597 43408653 -51863998 + (ATG)n Simple_repeat Simple_repeat 3 57 0 1 916 302 153 0 48 chr17 43408740 43408802 -51863849 + HAL1-3A_ME LINE L1 1960 2018 -840 1 916 276 102 0 0 chr17 43408858 43408907 -51863744 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 1 916 222 191 0 0 chr17 43409355 43409402 -51863249 + (CATG)n Simple_repeat Simple_repeat 3 49 0 1 916 354 45 0 0 chr17 43409512 43409556 -51863095 + (TATG)n Simple_repeat Simple_repeat 2 45 0 1 916 288 77 0 0 chr17 43409556 43409595 -51863056 + (CCTA)n Simple_repeat Simple_repeat 1 39 0 1 916 431 255 69 0 chr17 43409603 43409705 -51862946 - PB1D10 SINE Alu -7 110 2 1 916 713 221 115 11 chr17 43410304 43410478 -51862173 - B3 SINE B2 0 216 25 1 916 773 251 151 46 chr17 43410596 43410855 -51861796 + B4 SINE B4 7 292 0 1 916 1097 61 6 18 chr17 43411386 43411552 -51861099 + (TCC)n Simple_repeat Simple_repeat 2 165 0 1 916 510 0 43 0 chr17 43411555 43411625 -51861026 + (TC)n Simple_repeat Simple_repeat 2 74 0 1 916 296 304 11 21 chr17 43411645 43411739 -51860912 - B1F2 SINE Alu -56 93 1 1 916 264 185 0 0 chr17 43413682 43413736 -51858915 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 916 475 248 14 55 chr17 43413890 43414035 -51858616 - B4A SINE B4 -153 139 1 1 916 866 302 44 7 chr17 43414865 43415135 -51857516 - B4A SINE B4 -2 290 11 1 916 446 234 96 104 chr17 43415852 43416072 -51856579 + ID_B1 SINE B4 5 222 -2 1 916 202 314 24 16 chr17 43417050 43417173 -51855478 + GA-rich Low_complexity Low_complexity 2 125 0 1 916 190 365 43 19 chr17 43417530 43417692 -51854959 - MIR SINE MIR -38 224 59 1 916 239 331 13 33 chr17 43417774 43417927 -51854724 - MER53 DNA hAT -24 169 20 1 916 620 277 159 0 chr17 43418032 43418252 -51854399 + MTE2b LTR MaLR 1 255 -124 1 916 2901 142 42 29 chr17 43418252 43418796 -51853855 + RLTR20A1 LTR ERVK 1 551 0 1 916 502 237 21 14 chr17 43418796 43418924 -51853727 + MTE2b LTR MaLR 251 379 0 1 916 284 355 8 16 chr17 43419726 43419852 -51852799 + ID_B1 SINE B4 82 206 -18 1 916 265 210 23 58 chr17 43420006 43420092 -51852559 + MTE2a LTR MaLR 297 379 0 1 916 914 126 57 9 chr17 43420092 43420426 -51852225 + (CA)n Simple_repeat Simple_repeat 1 349 0 1 916 423 0 0 0 chr17 43420465 43420512 -51852139 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 916 483 18 0 0 chr17 43420512 43420567 -51852084 + (TA)n Simple_repeat Simple_repeat 1 56 0 1 916 487 300 50 70 chr17 43420599 43420771 -51851880 + MER2 DNA MER2_type 87 253 -92 1 916 1412 148 0 26 chr17 43420771 43421000 -51851651 - URR1A DNA MER1_type -3 223 1 1 916 487 300 50 70 chr17 43421000 43421085 -51851566 + MER2 DNA MER2_type 254 339 -6 1 916 514 224 372 0 chr17 43421209 43421365 -51851286 + B3 SINE B2 1 214 -2 1 916 1082 78 0 0 chr17 43421386 43421528 -51851123 + B1_Mus1 SINE Alu 1 142 -6 1 916 1035 152 0 0 chr17 43421950 43422128 -51850523 + CT-rich Low_complexity Low_complexity 3 180 0 1 916 3279 60 19 2 chr17 43422137 43422554 -51850097 - L1_Mus1 LINE L1 0 6567 6144 1 916 215 207 48 12 chr17 43422560 43422643 -51850008 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 1 916 525 71 0 0 chr17 43422666 43422736 -51849915 + (TCTA)n Simple_repeat Simple_repeat 2 71 0 1 916 2527 76 0 60 chr17 43422790 43423138 -51849513 + ORR1A2 LTR MaLR 1 327 0 1 916 351 204 344 38 chr17 43423248 43423408 -51849243 + ID_B1 SINE B4 9 217 -7 1 916 373 145 60 0 chr17 43423564 43423647 -51849004 - Lx LINE L1 -6 6648 6561 1 916 1130 122 39 0 chr17 43423648 43423829 -51848822 - Lx2 LINE L1 -40 6957 6770 1 916 6992 108 42 7 chr17 43423826 43424847 -51847804 - Lx2 LINE L1 -354 6643 5587 1 916 11300 83 48 7 chr17 43424849 43427175 -51845476 - L1VL4 LINE L1 -951 2608 196 1 916 26 30 0 0 chr17 43427175 43427208 -51845443 + AT_rich Low_complexity Low_complexity 1 33 0 1 916 1216 222 119 27 chr17 43427319 43427656 -51844995 - ORR1D2 LTR MaLR -2 368 1 1 916 635 248 31 0 chr17 43428422 43428551 -51844100 - ID_B1 SINE B4 -15 209 77 1 916 387 0 0 0 chr17 43428566 43428609 -51844042 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 916 391 330 0 0 chr17 43428610 43428710 -51843941 - B1F2 SINE Alu -19 130 31 1 916 349 271 48 48 chr17 43428885 43429052 -51843599 - B4A SINE B4 -123 169 3 1 916 345 318 193 19 chr17 43429060 43429574 -51843077 + L2 LINE L2 2283 2885 -534 1 916 214 255 92 64 chr17 43429584 43429693 -51842958 + B4 SINE B4 15 126 -166 1 916 306 0 0 0 chr17 43429747 43429781 -51842870 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 916 719 268 155 33 chr17 43430405 43430741 -51841910 - MTEb LTR MaLR 0 379 3 1 916 252 77 0 0 chr17 43431679 43431718 -51840933 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 916 286 349 86 45 chr17 43432306 43432642 -51840009 - MLT1I LTR MaLR -50 361 12 1 916 269 248 115 29 chr17 43432683 43432787 -51839864 + MER5A DNA MER1_type 4 116 -73 1 916 936 215 14 19 chr17 43433022 43433235 -51839416 - B3 SINE B2 -3 213 2 1 916 722 129 27 13 chr17 43434219 43434368 -51838283 + (TAGA)n Simple_repeat Simple_repeat 2 152 0 1 916 615 81 0 0 chr17 43434459 43434545 -51838106 + (TC)n Simple_repeat Simple_repeat 1 86 0 1 916 315 0 0 0 chr17 43434545 43434579 -51838072 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 916 597 220 0 0 chr17 43434699 43434808 -51837843 + B1F SINE Alu 12 120 -29 1 916 303 203 0 0 chr17 43434822 43434896 -51837755 + GA-rich Low_complexity Low_complexity 3 76 0 1 916 519 242 379 0 chr17 43435525 43435734 -51836917 + B4A SINE B4 3 290 -2 1 916 804 307 52 35 chr17 43436167 43436454 -51836197 - B4 SINE B4 0 292 1 1 916 365 267 105 158 chr17 43436477 43436686 -51835965 - B3A SINE B2 0 198 1 1 916 578 273 57 86 chr17 43437183 43437463 -51835188 - B4A SINE B4 -16 276 5 1 916 432 0 0 0 chr17 43437504 43437552 -51835099 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 916 1003 266 54 11 chr17 43437901 43438178 -51834473 + B4 SINE B4 4 292 0 1 916 360 0 0 0 chr17 43438211 43438251 -51834400 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 916 212 349 43 96 chr17 43438865 43438912 -51833739 + B4A SINE B4 51 191 -101 1 916 419 343 0 14 chr17 43438912 43439057 -51833594 + B1F SINE Alu 6 148 -1 1 916 212 349 43 96 chr17 43439057 43439074 -51833577 + B4A SINE B4 192 248 -44 1 916 367 148 12 47 chr17 43439180 43439265 -51833386 - Lx6 LINE L1 -5 7455 7374 1 916 234 91 0 0 chr17 43439342 43439375 -51833276 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 1 916 1857 195 53 44 chr17 43439833 43440246 -51832405 + MTD LTR MaLR 1 417 -2 1 916 223 305 12 24 chr17 43440354 43440438 -51832213 + (TATG)n Simple_repeat Simple_repeat 4 86 0 1 916 1050 115 0 0 chr17 43441005 43441600 -51831051 + (TG)n Simple_repeat Simple_repeat 1 595 0 1 916 698 299 64 38 chr17 43441602 43441866 -51830785 - B4A SINE B4 -12 280 10 1 916 450 53 0 0 chr17 43442790 43442847 -51829804 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 916 263 93 0 23 chr17 43442975 43443019 -51829632 + (GGGAA)n Simple_repeat Simple_repeat 5 47 0 1 916 803 10 10 0 chr17 43443019 43443115 -51829536 + (GAGAA)n Simple_repeat Simple_repeat 1 97 0 1 916 369 0 0 0 chr17 43443143 43443184 -51829467 + (GGGGA)n Simple_repeat Simple_repeat 5 45 0 1 916 1089 136 0 0 chr17 43443187 43443364 -51829287 + (GAGAA)n Simple_repeat Simple_repeat 3 179 0 1 916 574 241 14 20 chr17 43444605 43444753 -51827898 - B1F2 SINE Alu 0 149 3 1 916 261 303 0 0 chr17 43444937 43445003 -51827648 + ID2 SINE ID 5 70 -13 1 916 1858 209 35 61 chr17 43445268 43445758 -51826893 + Lx7 LINE L1 7220 7696 0 1 916 330 268 42 0 chr17 43445774 43445845 -51826806 + B1F1 SINE Alu 10 83 -66 1 916 238 279 0 0 chr17 43445838 43445899 -51826752 - B3A SINE B2 -134 64 4 1 916 385 198 47 23 chr17 43445984 43446155 -51826496 - RMER17C LTR ERVK -135 275 101 1 916 720 218 30 39 chr17 43446156 43446381 -51826270 - Lx7 LINE L1 0 7696 7516 1 916 613 305 7 19 chr17 43446591 43446745 -51825906 - RSINE1 SINE B4 -9 156 5 1 916 255 325 62 25 chr17 43448686 43448847 -51823804 + MER58A DNA MER1_type 26 192 -32 1 916 495 0 0 0 chr17 43448854 43448909 -51823742 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 916 289 295 68 23 chr17 43449135 43449267 -51823384 + MIRb SINE MIR 110 247 -21 1 916 254 374 74 9 chr17 43449778 43449886 -51822765 + B4 SINE B4 85 199 -93 1 916 495 0 0 0 chr17 43449925 43449980 -51822671 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 916 440 214 87 0 chr17 43450355 43450458 -51822193 + B1F1 SINE Alu 28 139 -10 1 916 696 24 0 0 chr17 43450458 43450540 -51822111 + (CAAG)n Simple_repeat Simple_repeat 2 83 0 1 916 808 240 6 28 chr17 43450852 43451032 -51821619 + B3 SINE B2 41 216 0 1 916 22 35 0 0 chr17 43451032 43451061 -51821590 + AT_rich Low_complexity Low_complexity 1 29 0 1 916 296 111 0 16 chr17 43452554 43452611 -51820040 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 916 972 111 0 0 chr17 43452611 43452791 -51819860 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 916 296 111 0 16 chr17 43452791 43452797 -51819854 + (TA)n Simple_repeat Simple_repeat 1 6 0 1 916 2060 151 88 6 chr17 43452833 43452989 -51819662 + ORR1C2 LTR MaLR 3 189 -195 1 916 261 83 0 0 chr17 43452989 43453025 -51819626 + (TCTG)n Simple_repeat Simple_repeat 2 37 0 1 916 2060 151 88 6 chr17 43453025 43453221 -51819430 + ORR1C2 LTR MaLR 190 384 0 1 916 547 249 20 97 chr17 43453348 43453546 -51819105 + B3 SINE B2 13 210 -6 1 916 342 312 54 15 chr17 43454140 43454270 -51818381 - MTE2a LTR MaLR 0 379 245 1 916 201 218 0 0 chr17 43454279 43454357 -51818294 + GA-rich Low_complexity Low_complexity 1 78 0 1 916 362 57 0 19 chr17 43454346 43454400 -51818251 + (CAGA)n Simple_repeat Simple_repeat 2 54 0 1 916 213 175 0 0 chr17 43454401 43454441 -51818210 + (CACG)n Simple_repeat Simple_repeat 4 43 0 1 916 486 0 0 0 chr17 43454441 43454495 -51818156 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 916 243 299 101 121 chr17 43454508 43454706 -51817945 - MTE2a LTR MaLR -184 195 2 1 916 820 44 18 0 chr17 43454732 43454845 -51817806 + (TCCC)n Simple_repeat Simple_repeat 2 116 0 1 916 550 284 42 78 chr17 43454923 43455114 -51817537 + B3A SINE B2 1 184 -14 1 916 1043 69 0 7 chr17 43455792 43455938 -51816713 + (TCTA)n Simple_repeat Simple_repeat 1 145 0 1 916 387 0 0 0 chr17 43455938 43455981 -51816670 + (CCCA)n Simple_repeat Simple_repeat 1 43 0 1 916 912 135 0 0 chr17 43455981 43456129 -51816522 + (TCTA)n Simple_repeat Simple_repeat 2 149 0 1 916 1053 150 0 0 chr17 43456138 43456318 -51816333 + (CCTA)n Simple_repeat Simple_repeat 1 180 0 1 916 722 223 0 8 chr17 43456332 43456463 -51816188 - B1_Mur3 SINE Alu -19 130 1 1 916 677 201 241 0 chr17 43456493 43456667 -51815984 - B3 SINE B2 0 216 1 1 916 581 181 16 57 chr17 43457492 43457615 -51815036 + PB1D9 SINE Alu 1 118 -2 1 916 468 0 0 0 chr17 43457767 43457819 -51814832 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 1 916 255 200 18 35 chr17 43457853 43457910 -51814741 + B1_Mus2 SINE Alu 81 136 -11 1 916 573 155 16 0 chr17 43458346 43458550 -51814101 + (CA)n Simple_repeat Simple_repeat 1 207 0 1 916 685 144 29 0 chr17 43458590 43458764 -51813887 + (CA)n Simple_repeat Simple_repeat 1 179 0 1 916 464 178 28 17 chr17 43458776 43458953 -51813698 + (CA)n Simple_repeat Simple_repeat 1 179 0 1 916 357 43 0 0 chr17 43458987 43459034 -51813617 + (CAGA)n Simple_repeat Simple_repeat 4 50 0 1 916 1038 305 52 18 chr17 43459429 43459756 -51812895 + Lx8 LINE L1 6917 7254 -219 1 916 1553 221 59 3 chr17 43459768 43460109 -51812542 - ORR1D2 LTR MaLR -4 366 7 1 916 473 222 146 39 chr17 43460144 43460322 -51812329 + Lx8 LINE L1 7277 7473 0 1 916 1044 209 47 0 chr17 43461005 43461196 -51811455 + B3 SINE B2 1 200 -16 1 916 567 261 0 0 chr17 43461802 43461936 -51810715 + RSINE1 SINE B4 14 147 -18 1 916 423 0 0 0 chr17 43461937 43461984 -51810667 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 916 949 264 31 42 chr17 43462470 43462758 -51809893 + Lx9 LINE L1 6898 7182 -462 1 916 636 38 0 0 chr17 43462758 43462837 -51809814 + (GA)n Simple_repeat Simple_repeat 2 80 0 1 916 378 0 0 0 chr17 43463341 43463383 -51809268 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 916 34 24 0 0 chr17 43463541 43463582 -51809069 + AT_rich Low_complexity Low_complexity 1 41 0 1 916 218 256 0 47 chr17 43463905 43463991 -51808660 + G-rich Low_complexity Low_complexity 3 84 0 1 916 903 225 160 62 chr17 43464540 43464708 -51807943 - MTD LTR MaLR -14 405 205 1 916 429 70 0 0 chr17 43464708 43464765 -51807886 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 916 903 225 160 62 chr17 43464765 43464965 -51807686 - MTD LTR MaLR -215 204 2 1 916 310 320 8 6 chr17 43465513 43465619 -51807032 + PB1D10 SINE Alu 5 108 -9 1 916 1168 68 0 0 chr17 43465921 43466068 -51806583 - B1_Mus1 SINE Alu -1 147 1 1 916 244 182 0 0 chr17 43466074 43466118 -51806533 - ID_B1 SINE B4 -75 149 106 1 916 252 209 75 0 chr17 43466445 43466512 -51806139 - B4A SINE B4 -201 91 20 1 916 231 224 0 0 chr17 43466805 43466854 -51805797 + MIR3 SINE MIR 156 204 -4 1 916 501 17 0 0 chr17 43467416 43467474 -51805177 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 916 245 242 14 43 chr17 43467507 43467576 -51805075 + MER5A DNA MER1_type 2 68 -121 1 916 734 292 14 14 chr17 43467588 43467800 -51804851 + B4 SINE B4 7 218 -74 1 916 1402 137 70 90 chr17 43467872 43468272 -51804379 + RMER17C LTR ERVK 19 410 0 1 916 213 310 58 0 chr17 43468802 43468889 -51803762 + PB1D7 SINE Alu 29 120 0 1 916 306 0 0 0 chr17 43469280 43469314 -51803337 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 916 246 95 0 0 chr17 43469314 43469355 -51803296 + (CAGAGA)n Simple_repeat Simple_repeat 3 44 0 1 916 429 95 0 0 chr17 43469993 43470056 -51802595 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 916 266 246 0 32 chr17 43470122 43470185 -51802466 + B3A SINE B2 7 67 -131 1 916 384 22 0 0 chr17 43470189 43470234 -51802417 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 916 552 232 43 0 chr17 43470465 43470603 -51802048 + RSINE1 SINE B4 3 146 -19 1 916 1290 148 23 14 chr17 43470685 43470740 -51801911 - URR1B DNA MER1_type 0 225 167 1 916 414 0 0 0 chr17 43470740 43470786 -51801865 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 916 1290 148 23 14 chr17 43470786 43470949 -51801702 - URR1B DNA MER1_type -59 166 5 1 916 300 305 48 53 chr17 43471364 43471551 -51801100 + MIRb SINE MIR 78 263 -5 1 916 458 274 41 54 chr17 43471721 43471869 -51800782 + B3A SINE B2 41 192 -24 1 916 294 29 0 0 chr17 43471869 43471904 -51800747 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 916 444 292 46 35 chr17 43471904 43471929 -51800722 + B3 SINE B2 193 216 0 1 916 216 0 0 0 chr17 43471963 43471987 -51800664 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 916 234 200 22 157 chr17 43471999 43472088 -51800563 + MT2B2 LTR ERVL 166 242 -342 1 916 421 215 36 36 chr17 43472010 43472121 -51800530 + PB1D9 SINE Alu 8 118 -2 1 916 825 297 51 18 chr17 43472520 43472535 -51800116 - B4 SINE B4 -7 285 272 1 916 336 94 0 0 chr17 43472535 43472588 -51800063 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 916 825 297 51 18 chr17 43472588 43472846 -51799805 - B4 SINE B4 -21 271 3 1 916 420 20 0 0 chr17 43472905 43472954 -51799697 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 916 271 136 34 0 chr17 43473688 43473747 -51798904 + GA-rich Low_complexity Low_complexity 1 61 0 1 916 25 83 0 0 chr17 43474147 43474207 -51798444 + AT_rich Low_complexity Low_complexity 1 60 0 1 916 225 0 0 0 chr17 43474216 43474241 -51798410 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 916 414 278 18 9 chr17 43474258 43474367 -51798284 - B3A SINE B2 -42 156 47 1 916 452 299 107 26 chr17 43474379 43474650 -51798001 - RMER10A LTR ERVL -25 417 125 1 916 2675 172 54 82 chr17 43474650 43474944 -51797707 + RMER20B LTR ERVK 1 301 -326 1 916 183 42 0 0 chr17 43474944 43474968 -51797683 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 916 2675 172 54 82 chr17 43474968 43475079 -51797572 + RMER20B LTR ERVK 302 403 -224 1 916 1237 20 0 13 chr17 43475079 43475231 -51797420 + L1Md_F2 LINE L1 6421 6570 -12 1 916 2675 172 54 82 chr17 43475231 43475469 -51797182 + RMER20B LTR ERVK 404 627 0 1 916 1652 189 98 6 chr17 43476143 43476489 -51796162 + MTC LTR MaLR 36 413 -8 1 916 552 77 0 0 chr17 43477724 43477802 -51794849 + (TA)n Simple_repeat Simple_repeat 1 78 0 1 916 255 281 125 10 chr17 43477851 43477955 -51794696 - RSINE1 SINE B4 -46 119 4 1 916 949 252 148 54 chr17 43478174 43478619 -51794032 + Lx9 LINE L1 7157 7643 -1 1 916 481 309 72 14 chr17 43479514 43479721 -51792930 + MER77 LTR ERVL 205 423 -184 1 916 180 0 0 0 chr17 43479765 43479785 -51792866 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 916 316 278 142 0 chr17 43480015 43480157 -51792494 + MER45A DNA Tip100 4 163 -15 1 916 6572 57 1 0 chr17 43480209 43481010 -51791641 + L1_Mus1 LINE L1 5766 6567 0 1 916 502 247 89 0 chr17 43481072 43481218 -51791433 + B4 SINE B4 132 290 -2 1 916 513 263 156 77 chr17 43481356 43481743 -51790908 - Lx9 LINE L1 -1175 6469 5960 1 916 189 0 0 0 chr17 43481743 43481764 -51790887 + (TTG)n Simple_repeat Simple_repeat 2 22 0 1 916 753 278 97 42 chr17 43481764 43482084 -51790567 - Lx9 LINE L1 -1514 5959 5629 1 916 189 147 0 0 chr17 43482924 43482958 -51789693 + (T)n Simple_repeat Simple_repeat 1 34 0 1 916 1190 68 0 0 chr17 43483402 43483548 -51789103 + B1_Mm SINE Alu 2 147 0 1 916 507 17 0 0 chr17 43483797 43483857 -51788794 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 916 599 250 60 15 chr17 43485471 43485670 -51786981 + Zaphod DNA Tip100 1929 2136 -1895 1 916 257 0 30 0 chr17 43485784 43485817 -51786834 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 916 316 291 0 12 chr17 43486040 43486120 -51786531 - ID4_ SINE ID -2 81 3 1 916 186 43 0 0 chr17 43486203 43486226 -51786425 + (TAA)n Simple_repeat Simple_repeat 3 25 0 1 916 201 147 0 0 chr17 43486233 43486267 -51786384 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 916 35 24 0 0 chr17 43486339 43486381 -51786270 + AT_rich Low_complexity Low_complexity 1 42 0 1 916 342 266 25 42 chr17 43486391 43486509 -51786142 + PB1D10 SINE Alu 1 116 -1 1 916 364 273 22 117 chr17 43486608 43486745 -51785906 - B1F SINE Alu -23 126 3 1 916 234 292 134 10 chr17 43486999 43487096 -51785555 - B1_Mus1 SINE Alu -3 145 37 1 916 317 358 53 0 chr17 43487192 43487379 -51785272 + Zaphod DNA Tip100 3101 3297 -734 1 916 376 250 23 0 chr17 43488000 43488088 -51784563 - RSINE1 SINE B4 -49 116 27 1 916 185 56 0 100 chr17 43488116 43488156 -51784495 + A-rich Low_complexity Low_complexity 3 38 0 1 916 272 250 23 81 chr17 43488264 43488351 -51784300 - ID4 SINE ID -1 82 1 1 916 750 302 42 63 chr17 43488636 43489064 -51783587 - MTD LTR MaLR 0 419 1 1 916 247 317 9 46 chr17 43490064 43490173 -51782478 + LTR85c LTR Gypsy? 436 540 -283 1 916 1200 114 22 5 chr17 43490253 43490438 -51782213 + B2_Mm2 SINE B2 2 189 -6 1 916 328 257 85 9 chr17 43490622 43490728 -51781923 + L1MA4A LINE L1 5816 5929 -374 1 916 21 36 0 0 chr17 43491452 43491480 -51781171 + AT_rich Low_complexity Low_complexity 1 28 0 1 916 327 25 0 0 chr17 43491480 43491520 -51781131 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 916 521 306 8 0 chr17 43491524 43491658 -51780993 - RSINE1 SINE B4 -27 138 4 1 916 757 284 64 77 chr17 43491660 43491713 -51780938 - L1MA4A LINE L1 -301 6002 5955 1 916 1407 222 75 31 chr17 43491713 43492071 -51780580 - ORR1D1 LTR MaLR 0 374 1 1 916 757 284 64 77 chr17 43492071 43492551 -51780100 - L1MA4A LINE L1 -349 5954 5476 1 916 307 221 32 0 chr17 43492553 43492648 -51780003 + CT-rich Low_complexity Low_complexity 3 100 0 1 916 267 250 60 78 chr17 43492651 43492868 -51779783 - L1MA4A LINE L1 -812 5491 5279 1 916 306 0 0 0 chr17 43492954 43492988 -51779663 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 916 399 307 68 0 chr17 43493008 43493184 -51779467 - L1MA4A LINE L1 -1962 4181 3994 1 916 595 65 21 0 chr17 43493194 43493287 -51779364 + (TC)n Simple_repeat Simple_repeat 2 96 0 1 916 1043 178 105 0 chr17 43493305 43493496 -51779155 + B3 SINE B2 1 211 -5 1 916 680 251 36 24 chr17 43494680 43494847 -51777804 + B3A SINE B2 1 169 -29 1 916 513 0 0 0 chr17 43494850 43494907 -51777744 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 916 423 0 0 0 chr17 43494907 43494953 -51777698 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 916 246 300 17 0 chr17 43495953 43496013 -51776638 - B3 SINE B2 -155 61 1 1 916 934 164 75 141 chr17 43496484 43496725 -51775926 - URR1A DNA MER1_type 0 226 2 1 916 272 235 0 110 chr17 43498603 43498694 -51773957 + MER5A1 DNA MER1_type 22 102 -64 1 916 303 93 0 0 chr17 43499056 43499099 -51773552 + (T)n Simple_repeat Simple_repeat 1 43 0 1 916 294 29 0 0 chr17 43499158 43499193 -51773458 + (GGAA)n Simple_repeat Simple_repeat 2 36 0 1 916 507 248 62 25 chr17 43499839 43500000 -51772651 - ID_B1 SINE B4 -2 222 56 1 916 210 244 0 0 chr17 43500635 43500676 -51771975 + polypyrimidine Low_complexity Low_complexity 5 45 0 1 916 355 302 22 37 chr17 43500703 43500837 -51771814 - ID_B1 SINE B4 -6 218 87 2 916 715 273 17 64 chr17 43501046 43501281 -51771370 + B4A SINE B4 2 225 -67 3 916 1057 115 0 7 chr17 43501285 43501434 -51771217 + B1_Mus1 SINE Alu 1 148 0 4 916 223 333 69 28 chr17 43501572 43501717 -51770934 + L3 LINE CR1 4048 4198 -291 5 916 2618 136 37 58 chr17 43501764 43502280 -51770371 + RLTR31_Mm LTR ERVK 57 561 0 6 916 590 248 48 34 chr17 43502282 43502491 -51770160 + L3 LINE CR1 4272 4483 -6 5 916 777 195 0 0 chr17 43504368 43504496 -51768155 - B1_Mus2 SINE Alu -13 134 7 7 916 536 298 0 0 chr17 43504491 43504615 -51768036 + B1F SINE Alu 18 141 -8 8 916 932 291 89 4 chr17 43504638 43504897 -51767754 + B4 SINE B4 12 292 0 9 916 221 295 0 0 chr17 43505639 43505700 -51766951 + (TG)n Simple_repeat Simple_repeat 1 61 0 1 916 360 316 0 0 chr17 43506681 43506962 -51765689 + (TG)n Simple_repeat Simple_repeat 1 281 0 1 916 710 316 31 79 chr17 43507005 43507326 -51765325 - B4A SINE B4 -8 284 2 1 916 805 258 80 170 chr17 43507652 43508053 -51764598 + MTE2a LTR MaLR 1 365 -14 1 916 501 214 88 44 chr17 43508408 43508545 -51764106 + B1_Mur4 SINE Alu 2 144 -6 1 916 429 141 0 0 chr17 43508550 43508621 -51764030 + (GGA)n Simple_repeat Simple_repeat 3 73 0 1 916 202 231 0 19 chr17 43508794 43508847 -51763804 + A-rich Low_complexity Low_complexity 4 55 0 1 916 420 319 21 49 chr17 43508979 43509101 -51763550 + B1F1 SINE Alu 1 118 -31 1 916 216 255 0 78 chr17 43509101 43509152 -51763499 + B3A SINE B2 1 47 -151 1 916 389 258 58 8 chr17 43509622 43509743 -51762908 - MIR SINE MIR -117 145 19 1 916 230 333 107 10 chr17 43510448 43510551 -51762100 - MER5A DNA MER1_type -28 161 49 2 916 492 18 0 0 chr17 43510592 43510649 -51762002 + (CA)n Simple_repeat Simple_repeat 1 57 0 2 916 268 250 237 11 chr17 43511431 43511524 -51761127 + RSINE1 SINE B4 10 123 -42 2 916 489 285 46 8 chr17 43511872 43511886 -51760765 + B1F SINE Alu 5 140 -9 2 916 680 222 0 0 chr17 43511886 43512003 -51760648 + ID_B1 SINE B4 99 215 -9 2 916 1111 233 153 23 chr17 43513208 43513555 -51759096 - Lx8 LINE L1 0 7473 7082 2 916 524 238 70 47 chr17 43514412 43514540 -51758111 + B1_Mur2 SINE Alu 9 139 -10 2 916 303 250 14 14 chr17 43514555 43514628 -51758023 + MER97c DNA MER1_type? 302 374 -716 2 916 304 306 128 43 chr17 43514631 43514795 -51757856 + B3A SINE B2 37 214 -2 2 916 374 274 138 87 chr17 43514831 43514913 -51757738 + MER97c DNA MER1_type? 417 501 -589 2 916 730 259 75 0 chr17 43514913 43515114 -51757537 + ID_B1 SINE B4 1 216 -8 2 916 374 274 138 87 chr17 43515114 43515307 -51757344 + MER97c DNA MER1_type? 502 706 -384 2 916 248 328 31 0 chr17 43515372 43515436 -51757215 + ID4 SINE ID 7 72 -11 3 916 231 36 0 0 chr17 43515631 43515659 -51756992 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 917 7535 24 8 5 chr17 43516567 43517446 -51755205 - L1Md_F3 LINE L1 0 6584 5703 3 917 1256 278 24 10 chr17 43517985 43518279 -51754372 + MTE2b LTR MaLR 1 298 -81 3 917 243 0 0 0 chr17 43519167 43519194 -51753457 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 917 624 253 52 20 chr17 43519257 43519410 -51753241 + B4A SINE B4 123 280 -12 3 917 336 64 0 0 chr17 43519416 43519463 -51753188 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 917 274 266 16 0 chr17 43519687 43519751 -51752900 + B1F SINE Alu 28 92 -57 3 917 231 36 0 0 chr17 43519763 43519791 -51752860 + (CAAT)n Simple_repeat Simple_repeat 3 30 0 3 917 191 337 32 11 chr17 43521050 43521143 -51751508 + MIRc SINE MIR 23 117 -151 3 917 805 305 77 77 chr17 43521178 43521234 -51751417 + MTE2a LTR MaLR 1 55 -364 4 917 2102 130 0 3 chr17 43521234 43521551 -51751100 - Lx2B LINE L1 -2 6998 6683 4 917 1090 256 60 57 chr17 43521551 43521912 -51750739 + MTE2a LTR MaLR 40 405 -14 4 917 225 188 0 0 chr17 43521925 43521973 -51750678 + T-rich Low_complexity Low_complexity 3 50 0 4 917 281 281 87 29 chr17 43523357 43523529 -51749122 - L2 LINE L2 -907 2512 2331 4 917 226 302 68 72 chr17 43523679 43523957 -51748694 - L2c LINE L2 -22 3365 3070 4 917 206 62 0 30 chr17 43524472 43524505 -51748146 + (TATAA)n Simple_repeat Simple_repeat 2 33 0 4 917 626 320 132 11 chr17 43524662 43524934 -51747717 + MER2 DNA MER2_type 25 329 -16 4 917 513 301 0 99 chr17 43525124 43525305 -51747346 - RSINE1 SINE B4 0 165 3 4 917 735 12 0 0 chr17 43525580 43525664 -51746987 + (TC)n Simple_repeat Simple_repeat 1 84 0 4 917 189 0 0 0 chr17 43525664 43525684 -51746967 + (CA)n Simple_repeat Simple_repeat 1 21 0 4 917 225 302 0 37 chr17 43525702 43525784 -51746867 + MIR SINE MIR 72 147 -61 5 917 373 224 13 81 chr17 43527260 43527369 -51745282 - B1_Mur1 SINE Alu -8 141 30 5 917 198 0 0 0 chr17 43527535 43527557 -51745094 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 5 917 23 33 0 0 chr17 43527745 43527775 -51744876 + AT_rich Low_complexity Low_complexity 1 30 0 5 917 201 363 35 69 chr17 43528636 43528781 -51743870 - MIR3 SINE MIR -120 156 10 5 917 1262 34 7 0 chr17 43529682 43529828 -51742823 - B1_Mm SINE Alu 0 147 1 5 917 284 419 70 12 chr17 43529843 43530087 -51742564 - MIR SINE MIR -2 260 3 5 917 211 372 164 35 chr17 43530193 43530419 -51742232 + MIRb SINE MIR 3 257 -11 5 917 264 224 0 0 chr17 43531774 43531841 -51740810 + (TG)n Simple_repeat Simple_repeat 2 68 0 5 917 1191 48 0 14 chr17 43531961 43532108 -51740543 - B1_Mus2 SINE Alu -2 145 1 5 917 954 235 50 14 chr17 43532108 43532328 -51740323 - B4A SINE B4 -63 229 2 6 917 264 30 0 0 chr17 43533205 43533238 -51739413 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 917 630 294 43 57 chr17 43533275 43533556 -51739095 - B4A SINE B4 -12 280 4 6 917 258 333 0 0 chr17 43533582 43533660 -51738991 - ID2 SINE ID -1 82 5 6 917 807 129 42 21 chr17 43533871 43534014 -51738637 + B1_Mus1 SINE Alu 1 146 -2 6 917 874 158 6 11 chr17 43534037 43534216 -51738435 + GA-rich Low_complexity Low_complexity 3 180 0 6 917 460 193 56 22 chr17 43534704 43534794 -51737857 - PB1D10 SINE Alu -8 109 17 6 917 306 291 30 45 chr17 43534987 43535120 -51737531 + L2b LINE L2 2937 3067 -308 6 917 543 16 0 0 chr17 43535129 43535193 -51737458 + (TC)n Simple_repeat Simple_repeat 1 64 0 6 917 486 0 0 0 chr17 43535269 43535323 -51737328 + (TTAG)n Simple_repeat Simple_repeat 3 56 0 6 917 230 304 50 75 chr17 43535401 43535561 -51737090 + MIR SINE MIR 97 252 -10 7 917 333 354 62 0 chr17 43535598 43535728 -51736923 + L2b LINE L2 3238 3375 0 6 917 182 279 196 28 chr17 43537101 43537208 -51735443 + MIRm SINE MIR 52 176 -100 7 917 187 321 59 59 chr17 43539372 43539491 -51733160 - MIRc SINE MIR -62 206 88 7 917 717 242 130 5 chr17 43539572 43539780 -51732871 + B4A SINE B4 2 235 -57 7 917 336 327 114 85 chr17 43540209 43540490 -51732161 - B4 SINE B4 -1 291 3 7 917 217 220 0 39 chr17 43540525 43540577 -51732074 + CT-rich Low_complexity Low_complexity 1 50 0 7 917 409 295 67 57 chr17 43541176 43541370 -51731281 - RMER30 DNA MER1_type -5 197 2 7 917 286 362 0 9 chr17 43541655 43541761 -51730890 + MIR SINE MIR 112 216 -46 7 917 728 291 90 76 chr17 43541907 43542264 -51730387 - MTEa LTR MaLR -14 365 4 7 917 1000 288 19 15 chr17 43542949 43543210 -51729441 + B4A SINE B4 4 265 -27 7 917 627 90 0 0 chr17 43543215 43543315 -51729336 + (CA)n Simple_repeat Simple_repeat 1 100 0 8 917 1088 183 4 43 chr17 43544019 43544253 -51728398 + URR1B DNA MER1_type 1 225 0 8 917 821 157 37 0 chr17 43544958 43545092 -51727559 + B1_Mus2 SINE Alu 5 143 -4 8 917 366 348 70 6 chr17 43545779 43545935 -51726716 - MIR SINE MIR -39 223 58 8 917 513 0 0 0 chr17 43545960 43546017 -51726634 + (TC)n Simple_repeat Simple_repeat 2 58 0 8 917 450 0 0 0 chr17 43546017 43546067 -51726584 + (TG)n Simple_repeat Simple_repeat 2 51 0 8 917 225 65 0 0 chr17 43546141 43546172 -51726479 + (TG)n Simple_repeat Simple_repeat 1 31 0 8 917 691 288 58 124 chr17 43546172 43546446 -51726205 - B4A SINE B4 0 292 37 8 917 316 311 186 62 chr17 43546466 43546757 -51725894 - MTE2a LTR MaLR -52 327 1 8 917 299 301 152 6 chr17 43546808 43546972 -51725679 - MIR SINE MIR -1 261 74 8 917 375 23 0 0 chr17 43546974 43547018 -51725633 + (TG)n Simple_repeat Simple_repeat 2 45 0 9 917 686 113 22 8 chr17 43547657 43547791 -51724860 + (TCTA)n Simple_repeat Simple_repeat 1 136 0 9 917 899 253 72 60 chr17 43547803 43548068 -51724583 - B4 SINE B4 -1 291 24 9 917 1595 149 190 10 chr17 43548071 43548382 -51724269 - ORR1B2 LTR MaLR 0 367 1 9 917 236 30 30 0 chr17 43548387 43548420 -51724231 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 9 917 444 214 0 12 chr17 43548424 43548509 -51724142 - PB1D10 SINE Alu -13 104 21 9 917 286 152 129 57 chr17 43548533 43548603 -51724048 - B2_Mm2 SINE B2 -9 186 112 9 917 1209 141 41 77 chr17 43548603 43548942 -51723709 - RMER17C LTR ERVK 0 410 84 9 917 201 133 0 0 chr17 43548945 43548975 -51723676 + (GGGGA)n Simple_repeat Simple_repeat 2 31 0 9 917 267 93 0 0 chr17 43548981 43549024 -51723627 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 9 917 772 73 26 52 chr17 43549044 43549160 -51723491 - B2_Mm2 SINE B2 -79 116 4 9 917 205 291 0 37 chr17 43549719 43549801 -51722850 + CT-rich Low_complexity Low_complexity 5 83 0 1 917 264 25 286 0 chr17 43550811 43550930 -51721721 + (TAGG)n Simple_repeat Simple_repeat 2 154 0 1 917 265 258 21 0 chr17 43550854 43550951 -51721700 + (TATATG)n Simple_repeat Simple_repeat 4 102 0 1 917 1151 252 7 43 chr17 43551207 43551510 -51721141 + B4 SINE B4 1 292 0 1 917 180 97 0 0 chr17 43551516 43551547 -51721104 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 917 301 223 86 98 chr17 43552191 43552365 -51720286 + Lx8 LINE L1 7301 7472 -1 1 917 313 130 0 0 chr17 43552641 43552687 -51719964 - HAL1-3A_ME LINE L1 -836 2022 1977 1 917 304 163 23 0 chr17 43552688 43552774 -51719877 + (TG)n Simple_repeat Simple_repeat 2 89 0 1 917 572 313 8 0 chr17 43552785 43552919 -51719732 - B4 SINE B4 -4 288 154 1 917 292 276 0 0 chr17 43552924 43553000 -51719651 + (TG)n Simple_repeat Simple_repeat 2 77 0 1 917 374 259 96 172 chr17 43553008 43553321 -51719330 - B4 SINE B4 -3 289 1 1 917 707 206 84 40 chr17 43554382 43554584 -51718067 - B3 SINE B2 -5 211 1 1 917 246 341 53 15 chr17 43554786 43554917 -51717734 + L2a LINE L2 3033 3168 -258 1 917 2475 138 45 5 chr17 43554917 43555340 -51717311 - RLTR28 LTR ERVL -84 440 1 1 917 225 0 0 0 chr17 43555341 43555366 -51717285 + (TTA)n Simple_repeat Simple_repeat 3 27 0 1 917 594 75 0 0 chr17 43555366 43555446 -51717205 + (TAG)n Simple_repeat Simple_repeat 1 80 0 1 917 323 289 168 7 chr17 43555946 43556089 -51716562 + MIRc SINE MIR 1 166 -102 1 917 702 258 15 15 chr17 43556222 43556419 -51716232 + B3A SINE B2 2 198 0 1 917 355 297 101 8 chr17 43556801 43556920 -51715731 + B1F SINE Alu 1 130 -19 1 917 785 127 0 7 chr17 43556940 43557075 -51715576 + (GGA)n Simple_repeat Simple_repeat 2 135 0 1 917 277 302 56 9 chr17 43557822 43557929 -51714722 - PB1D9 SINE Alu -8 112 1 1 917 22 0 0 0 chr17 43558414 43558436 -51714215 + AT_rich Low_complexity Low_complexity 1 22 0 1 917 525 32 0 0 chr17 43558738 43558801 -51713850 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 917 423 0 0 0 chr17 43558801 43558847 -51713804 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 917 522 341 210 12 chr17 43560347 43560671 -51711980 - MLT1F1 LTR MaLR 0 569 182 1 917 398 36 18 0 chr17 43560696 43560752 -51711899 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 1 917 921 148 213 0 chr17 43560881 43561064 -51711587 - URR1B DNA MER1_type -2 223 2 1 917 951 318 27 55 chr17 43562219 43562585 -51710066 - MTD LTR MaLR -58 361 6 1 917 506 295 38 114 chr17 43564110 43564247 -51708404 + Lx8 LINE L1 5636 5780 -520 1 917 351 113 0 0 chr17 43564247 43564300 -51708351 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 917 506 297 45 110 chr17 43564300 43564534 -51708117 + Lx8 LINE L1 5747 6020 -280 1 917 860 191 0 7 chr17 43564572 43564720 -51707931 + B1_Mus1 SINE Alu 1 147 -1 1 917 438 186 0 0 chr17 43565767 43565853 -51706798 + (TG)n Simple_repeat Simple_repeat 1 86 0 1 917 567 289 69 122 chr17 43565853 43565964 -51706687 - B4 SINE B4 0 292 214 1 917 4343 58 0 2 chr17 43565964 43566501 -51706150 - L1Md_F2 LINE L1 -8 6574 6039 1 917 567 289 69 122 chr17 43566501 43566692 -51705959 - B4 SINE B4 -79 213 6 1 917 325 290 57 38 chr17 43566798 43567007 -51705644 - L1MA10 LINE L1 -14 6320 5972 1 917 198 150 0 0 chr17 43568526 43568566 -51704085 + (CAT)n Simple_repeat Simple_repeat 1 40 0 1 917 1077 83 14 0 chr17 43569339 43569483 -51703168 + B1_Mus1 SINE Alu 3 148 0 1 917 473 0 18 0 chr17 43569709 43569766 -51702885 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 917 459 0 0 0 chr17 43569838 43569889 -51702762 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 917 592 289 5 49 chr17 43570109 43570313 -51702338 - RMER10B LTR ERVL -10 388 194 1 917 446 291 33 66 chr17 43570895 43570982 -51701669 + B1F SINE Alu 3 93 -56 1 917 2952 52 0 0 chr17 43570982 43571328 -51701323 + ORR1A0 LTR MaLR 1 346 0 1 917 446 291 33 66 chr17 43571328 43571391 -51701260 + B1F SINE Alu 94 148 -1 1 917 1411 259 35 9 chr17 43572531 43572874 -51699777 - ORR1E LTR MaLR -7 352 1 1 917 2032 184 35 47 chr17 43572912 43573334 -51699317 - MTC LTR MaLR 0 421 5 1 917 1660 164 26 54 chr17 43573677 43574026 -51698625 + RLTR11A2 LTR ERVK 3 341 -186 1 917 1122 196 84 4 chr17 43574026 43574252 -51698399 + Lx7 LINE L1 6566 6809 -887 1 917 869 134 84 45 chr17 43574252 43574431 -51698220 + RLTR11A2 LTR ERVK 342 527 0 1 917 712 277 30 35 chr17 43575155 43575357 -51697294 - ORR1E LTR MaLR -157 202 2 1 917 279 0 0 0 chr17 43577237 43577268 -51695383 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 917 878 163 0 0 chr17 43577271 43577406 -51695245 - B1_Mur4 SINE Alu -13 137 3 1 917 872 263 9 125 chr17 43577577 43577898 -51694753 + B4 SINE B4 5 288 -4 1 917 374 277 136 15 chr17 43579053 43579185 -51693466 + PB1 SINE Alu 1 148 -1 1 917 257 291 114 54 chr17 43579185 43579202 -51693449 + B4A SINE B4 86 243 -49 1 917 295 120 12 0 chr17 43579411 43579463 -51693188 + B3 SINE B2 1 56 -139 1 917 963 213 59 5 chr17 43579853 43579898 -51692753 - B3 SINE B2 0 216 165 1 917 492 18 0 0 chr17 43579898 43579955 -51692696 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 917 963 213 59 5 chr17 43579955 43580112 -51692539 - B3 SINE B2 -52 164 4 1 917 643 311 15 49 chr17 43580268 43580296 -51692355 + B3A SINE B2 2 23 -175 1 917 1913 239 28 90 chr17 43580296 43580842 -51691809 - RLTR18B LTR ERVK 0 512 1 1 917 643 311 15 49 chr17 43580842 43581016 -51691635 + B3A SINE B2 24 197 -1 1 917 609 302 35 6 chr17 43581397 43581567 -51691084 + B3A SINE B2 8 182 -16 1 917 318 224 17 0 chr17 43582846 43582923 -51689728 - L1PB4 LINE L1 -294 5862 5773 1 917 1223 234 84 38 chr17 43583300 43583647 -51689004 - MTEb LTR MaLR -16 363 1 1 917 219 36 0 0 chr17 43583680 43583708 -51688943 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 917 274 325 26 13 chr17 43584308 43584386 -51688265 + MTE2a LTR MaLR 44 122 -257 1 917 1138 269 66 56 chr17 43584364 43584683 -51687968 + MTE2a LTR MaLR 58 379 0 1 917 1195 245 118 35 chr17 43585422 43585792 -51686859 - MTD LTR MaLR -15 404 5 1 917 261 336 36 27 chr17 43585796 43585906 -51686745 - MLT1D LTR MaLR -389 116 6 1 917 528 220 221 35 chr17 43586139 43586370 -51686281 + B4A SINE B4 2 275 -17 1 917 423 0 0 0 chr17 43586377 43586424 -51686227 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 917 900 94 0 0 chr17 43589554 43589682 -51682969 + (GGGAA)n Simple_repeat Simple_repeat 5 132 0 1 917 195 282 0 0 chr17 43589708 43589779 -51682872 + GA-rich Low_complexity Low_complexity 4 74 0 1 917 385 240 0 0 chr17 43590809 43590884 -51681767 - ID4 SINE ID -1 82 8 1 917 664 126 48 0 chr17 43591203 43591306 -51681345 + U4 snRNA snRNA 1 108 -37 1 917 328 290 134 87 chr17 43592545 43592798 -51679853 + HAL1-3A_ME LINE L1 1942 2206 -652 1 917 1193 252 86 24 chr17 43593790 43594128 -51678523 - ORR1E LTR MaLR 0 359 1 1 917 439 342 0 0 chr17 43594962 43595108 -51677543 + (CA)n Simple_repeat Simple_repeat 2 147 0 1 917 555 303 0 43 chr17 43595290 43595497 -51677154 + B3A SINE B2 1 198 0 1 917 198 0 0 0 chr17 43597513 43597535 -51675116 + (T)n Simple_repeat Simple_repeat 1 22 0 1 917 969 220 71 13 chr17 43598012 43598238 -51674413 - RMER21B LTR ERV1 -349 493 255 1 917 241 250 24 16 chr17 43598349 43598475 -51674176 + (TA)n Simple_repeat Simple_repeat 1 127 0 1 917 401 236 18 18 chr17 43598743 43598855 -51673796 + L1MA4 LINE L1 5797 5908 -392 1 917 712 53 51 45 chr17 43598866 43599044 -51673607 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 917 747 261 18 6 chr17 43599176 43599342 -51673309 + B3A SINE B2 3 170 -28 1 917 333 48 0 0 chr17 43599342 43599384 -51673267 + RLTR10B LTR ERVK 1 42 -250 1 917 2085 81 83 46 chr17 43599391 43599739 -51672912 + RLTR10B2 LTR ERVK 5 365 0 1 917 2246 52 0 0 chr17 43599739 43600006 -51672645 + MMERVK10C-int LTR ERVK 1 267 -7314 1 917 362 298 0 26 chr17 43600038 43600155 -51672496 + A-rich Low_complexity Low_complexity 5 118 0 1 917 2578 16 117 0 chr17 43600155 43600488 -51672163 + MMERVK10C-int LTR ERVK 553 911 -1076 1 917 445 294 41 41 chr17 43600488 43600708 -51671943 + MMERVK10C-int LTR ERVK 1347 1566 -6015 1 917 2770 102 19 0 chr17 43600718 43601126 -51671525 + MMERVK10C-int LTR ERVK 5002 5810 -1771 1 917 7763 48 0 28 chr17 43601117 43602075 -51670576 + MMERVK10C-int LTR ERVK 6651 7581 0 1 917 280 56 0 0 chr17 43602075 43602111 -51670540 + RLTR10B LTR ERVK 1 36 -256 1 917 2084 35 0 121 chr17 43602111 43602434 -51670217 + RLTR10B LTR ERVK 9 292 0 1 917 22 35 0 0 chr17 43602449 43602478 -51670173 + AT_rich Low_complexity Low_complexity 1 29 0 1 917 670 225 119 38 chr17 43602971 43603156 -51669495 + MTD-int LTR MaLR 26 225 -1033 1 917 1319 249 123 24 chr17 43603156 43603530 -51669121 + MTD LTR MaLR 1 411 -8 1 917 3213 243 59 97 chr17 43603534 43604429 -51668222 + MTD-int LTR MaLR 221 1067 -191 1 917 811 163 13 20 chr17 43604429 43604579 -51668072 - B1_Mur3 SINE Alu 0 149 1 1 917 3213 243 59 97 chr17 43604579 43604762 -51667889 + MTD-int LTR MaLR 1068 1258 0 1 917 891 227 6 6 chr17 43604762 43604935 -51667716 + MTD LTR MaLR 1 173 -246 1 917 1302 78 0 0 chr17 43604942 43605109 -51667542 + B2_Mm2 SINE B2 1 167 -28 1 917 211 337 41 21 chr17 43605279 43605376 -51667275 - MIR SINE MIR -116 146 48 1 917 258 32 0 0 chr17 43605482 43605513 -51667138 + (GA)n Simple_repeat Simple_repeat 1 31 0 1 917 1081 206 5 27 chr17 43605554 43605774 -51666877 - B3 SINE B2 -1 215 1 1 917 351 155 0 0 chr17 43605938 43605996 -51666655 + B4 SINE B4 1 58 -234 1 917 324 70 0 0 chr17 43606058 43606101 -51666550 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 917 633 255 49 102 chr17 43606139 43606423 -51666228 - Lx8 LINE L1 -3 7470 7202 1 917 422 331 28 37 chr17 43607476 43607641 -51665010 - ID_B1 SINE B4 -44 248 84 1 917 257 302 9 78 chr17 43608208 43608323 -51664328 - B3A SINE B2 -10 188 82 1 917 657 279 46 6 chr17 43608856 43609029 -51663622 + Lx8 LINE L1 7139 7318 -155 1 917 528 254 9 0 chr17 43609201 43609315 -51663336 + PB1D7 SINE Alu 5 119 -1 1 917 2087 116 25 15 chr17 43609407 43609731 -51662920 - ORR1A2 LTR MaLR 0 327 1 1 917 230 276 0 33 chr17 43609768 43609828 -51662823 + LTR82B Low_complexity ERVL 417 474 -356 2 917 286 300 19 48 chr17 43610064 43610169 -51662482 + MER5A DNA MER1_type 27 128 -61 2 917 639 284 62 10 chr17 43610242 43610295 -51662356 - RLTR16 LTR ERVK 0 505 453 2 917 1389 24 0 0 chr17 43610295 43610464 -51662187 + (CCCCAG)n Simple_repeat Simple_repeat 3 171 0 2 917 639 284 62 10 chr17 43610464 43610602 -51662049 - RLTR16 LTR ERVK -53 452 304 2 917 891 144 29 18 chr17 43610611 43610781 -51661870 + Lx3C LINE L1 6803 6974 -2 2 917 25 0 0 0 chr17 43610782 43610807 -51661844 + AT_rich Low_complexity Low_complexity 1 25 0 2 917 324 70 0 0 chr17 43610896 43610939 -51661712 + (CCA)n Simple_repeat Simple_repeat 1 43 0 2 917 521 267 112 5 chr17 43610941 43611129 -51661522 - ID_B1 SINE B4 -16 208 1 2 917 279 0 0 0 chr17 43611176 43611207 -51661444 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 917 333 62 0 0 chr17 43611207 43611255 -51661396 + (GA)n Simple_repeat Simple_repeat 1 48 0 2 917 239 346 35 62 chr17 43611531 43611676 -51660975 - L2a LINE L2 0 3426 3286 2 917 259 247 27 0 chr17 43612448 43612521 -51660130 + RMER15 LTR ERVL 488 562 -13 2 917 531 289 128 46 chr17 43612522 43612953 -51659698 + L1MD3 LINE L1 7516 7981 -14 2 917 201 259 0 18 chr17 43613602 43613657 -51658994 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 917 853 261 68 68 chr17 43613659 43613951 -51658700 - B4A SINE B4 0 292 1 2 917 284 297 19 127 chr17 43614668 43614826 -51657825 + L1MA6 LINE L1 6153 6293 -7 2 917 22 35 0 0 chr17 43614933 43614962 -51657689 + AT_rich Low_complexity Low_complexity 1 29 0 2 917 1037 121 6 0 chr17 43615302 43615476 -51657175 + (TC)n Simple_repeat Simple_repeat 1 175 0 2 917 294 29 0 0 chr17 43615476 43615510 -51657141 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 917 302 260 13 64 chr17 43615544 43615622 -51657029 + B4 SINE B4 219 292 0 2 917 195 100 0 0 chr17 43618011 43618041 -51654610 + (TGGGGG)n Simple_repeat Simple_repeat 1 30 0 2 917 218 265 14 14 chr17 43618999 43619068 -51653583 + GA-rich Low_complexity Low_complexity 2 70 0 2 917 369 269 32 0 chr17 43619583 43619676 -51652975 - PB1D10 SINE Alu -2 115 20 2 917 53 17 0 0 chr17 43620043 43620103 -51652548 + AT_rich Low_complexity Low_complexity 1 60 0 2 917 660 124 0 0 chr17 43620103 43620208 -51652443 + (TA)n Simple_repeat Simple_repeat 2 106 0 2 917 315 0 0 0 chr17 43620626 43620661 -51651990 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 2 917 10987 24 2 0 chr17 43620713 43621991 -51650660 + L1_Mm LINE L1 3605 4884 -999 2 917 499 184 92 105 chr17 43622182 43622334 -51650317 + B1_Mur4 SINE Alu 1 150 0 2 917 508 184 20 13 chr17 43622531 43622680 -51649971 + (TA)n Simple_repeat Simple_repeat 1 150 0 2 917 423 0 0 0 chr17 43623810 43623857 -51648794 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 2 917 386 196 9 0 chr17 43624351 43624458 -51648193 + (TA)n Simple_repeat Simple_repeat 2 109 0 2 917 792 103 0 0 chr17 43625156 43625272 -51647379 + (CATATA)n Simple_repeat Simple_repeat 2 117 0 2 917 306 0 0 0 chr17 43626093 43626127 -51646524 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 917 556 233 6 11 chr17 43626638 43626816 -51645835 + (CATA)n Simple_repeat Simple_repeat 4 180 0 2 917 226 222 0 18 chr17 43626818 43626873 -51645778 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 917 1452 233 65 11 chr17 43626874 43627243 -51645408 - MTD LTR MaLR 0 419 31 2 917 423 0 0 0 chr17 43627295 43627342 -51645309 + (A)n Simple_repeat Simple_repeat 1 47 0 2 917 183 42 0 0 chr17 43627359 43627383 -51645268 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 917 2774 71 143 139 chr17 43627390 43627900 -51644751 + RLTR1B LTR ERV1 1 512 0 2 917 304 215 56 0 chr17 43627958 43628065 -51644586 + (TA)n Simple_repeat Simple_repeat 1 113 0 2 917 218 176 20 0 chr17 43628120 43628171 -51644480 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 917 388 280 94 13 chr17 43628849 43629008 -51643643 + B4A SINE B4 1 172 -120 2 917 302 330 0 0 chr17 43629056 43629165 -51643486 - L1MA6 LINE L1 -158 6142 6034 2 917 473 275 111 17 chr17 43629809 43629990 -51642661 + ORR1E LTR MaLR 1 198 -161 2 917 788 227 161 12 chr17 43630117 43630371 -51642280 - RMER21B LTR ERV1 -275 567 276 2 917 914 226 34 57 chr17 43630471 43630767 -51641884 + RLTR11B LTR ERVK 1 289 -164 2 917 253 60 0 74 chr17 43630813 43630867 -51641784 + (CAGAGA)n Simple_repeat Simple_repeat 3 52 0 2 917 270 238 0 0 chr17 43630995 43631058 -51641593 + BGLII_B LTR ERVK 352 414 -27 2 917 260 279 42 31 chr17 43631080 43631176 -51641475 + ORR1E LTR MaLR 261 357 -2 2 917 489 71 0 0 chr17 43631556 43631626 -51641025 + (TCCA)n Simple_repeat Simple_repeat 4 73 0 2 917 455 267 128 19 chr17 43632082 43632287 -51640364 + MTD LTR MaLR 139 375 -44 2 917 850 283 117 6 chr17 43632772 43633113 -51639538 + MTEa LTR MaLR 1 379 0 2 917 411 248 34 8 chr17 43633394 43633512 -51639139 - ID_B1 SINE B4 -67 157 37 2 917 195 42 0 0 chr17 43633846 43633870 -51638781 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 917 2293 136 53 18 chr17 43633894 43634329 -51638322 + RLTR20B2 LTR ERVK 1 450 -110 2 917 468 0 0 0 chr17 43634329 43634381 -51638270 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 917 1094 299 18 3 chr17 43634396 43634681 -51637970 - B4 SINE B4 -2 290 2 2 917 204 40 0 0 chr17 43635048 43635073 -51637578 + (TTA)n Simple_repeat Simple_repeat 3 27 0 2 917 1002 74 0 0 chr17 43635073 43635208 -51637443 - L1_Mus2 LINE L1 -11 6555 6421 2 917 1494 78 16 0 chr17 43635362 43635554 -51637097 + B2_Mm2 SINE B2 1 195 0 2 917 545 187 0 16 chr17 43635554 43635679 -51636972 + GA-rich Low_complexity Low_complexity 1 123 0 2 917 203 0 37 0 chr17 43635824 43635851 -51636800 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 2 917 641 275 76 25 chr17 43636614 43636812 -51635839 + B3 SINE B2 2 209 -7 2 917 1312 97 37 5 chr17 43636892 43637079 -51635572 + B2_Mm2 SINE B2 2 194 -1 2 917 23 54 0 0 chr17 43637456 43637493 -51635158 + AT_rich Low_complexity Low_complexity 1 37 0 2 917 767 199 14 0 chr17 43637665 43637806 -51634845 + B1_Mur3 SINE Alu 4 146 -3 2 917 195 129 0 0 chr17 43637829 43637860 -51634791 + (CAT)n Simple_repeat Simple_repeat 2 32 0 2 917 540 246 8 0 chr17 43637971 43638089 -51634562 - ID_B1 SINE B4 -19 205 87 2 917 365 329 87 0 chr17 43638816 43638977 -51633674 + B4 SINE B4 113 287 -5 2 917 299 353 0 15 chr17 43639126 43639261 -51633390 + B1_Mur3 SINE Alu 6 138 -11 2 917 1119 213 4 13 chr17 43640564 43640792 -51631859 - URR1A DNA MER1_type 0 226 1 2 917 317 315 26 18 chr17 43640931 43641044 -51631607 - ID_B1 SINE B4 -27 197 84 2 917 207 275 100 14 chr17 43641404 43641474 -51631177 + L2c LINE L2 3282 3357 -30 2 917 462 65 0 0 chr17 43641858 43641920 -51630731 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 917 439 274 0 0 chr17 43641936 43642042 -51630609 - B3A SINE B2 -60 138 33 2 917 189 0 0 0 chr17 43642058 43642079 -51630572 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2 917 235 233 101 25 chr17 43642080 43642199 -51630452 - Lx7 LINE L1 0 7696 7569 2 917 7437 143 35 22 chr17 43642196 43642558 -51630093 + Lx4B LINE L1 5727 6097 -961 2 917 1919 165 208 5 chr17 43642558 43642929 -51629722 + RLTR41 LTR ERV1 1 446 0 2 917 7437 143 35 22 chr17 43642929 43643564 -51629087 + Lx4B LINE L1 6098 6763 -295 2 917 410 0 20 0 chr17 43643564 43643614 -51629037 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 917 7437 143 35 22 chr17 43643614 43643655 -51628996 + Lx4B LINE L1 6764 6801 -257 2 917 1654 167 95 19 chr17 43643655 43643852 -51628799 - RMER17C LTR ERVK -3 407 187 2 917 525 16 0 0 chr17 43643852 43643914 -51628737 + (GA)n Simple_repeat Simple_repeat 2 63 0 2 917 1654 167 95 19 chr17 43643914 43644094 -51628557 - RMER17C LTR ERVK -224 186 1 2 917 7437 143 35 22 chr17 43644094 43644366 -51628285 + Lx4B LINE L1 6802 7054 -4 2 917 192 77 0 0 chr17 43644386 43644412 -51628239 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 2 917 3230 179 62 23 chr17 43644425 43645082 -51627569 - Lx7 LINE L1 -194 7502 6820 2 917 530 42 28 0 chr17 43645130 43645202 -51627449 + (TAGA)n Simple_repeat Simple_repeat 4 77 0 2 917 1572 226 148 7 chr17 43645247 43645652 -51626999 - MT2A LTR ERVL -71 462 1 2 917 474 316 47 12 chr17 43645700 43645870 -51626781 - MER58A DNA MER1_type -11 213 38 2 917 22 0 0 0 chr17 43645935 43645957 -51626694 + AT_rich Low_complexity Low_complexity 1 22 0 2 917 358 314 20 41 chr17 43646104 43646250 -51626401 - MIR SINE MIR -39 223 81 2 917 2144 128 17 8 chr17 43646616 43646972 -51625679 - RLTR15 LTR ERVK 0 359 1 2 918 840 150 6 17 chr17 43648270 43648446 -51624205 + CT-rich Low_complexity Low_complexity 3 176 0 2 918 649 203 64 14 chr17 43648459 43648599 -51624052 - B1_Mur1 SINE Alu -1 148 2 2 918 688 297 16 5 chr17 43648772 43648958 -51623693 - ID_B1 SINE B4 -13 211 24 2 918 1015 231 29 46 chr17 43649250 43649599 -51623052 - RLTR15 LTR ERVK -16 343 1 2 918 4233 71 6 0 chr17 43650537 43651073 -51621578 - L1_Mus1 LINE L1 0 6567 6029 2 918 1096 220 57 38 chr17 43651104 43651420 -51621231 + Lx8 LINE L1 6861 7182 -291 2 918 1849 247 40 25 chr17 43651421 43651916 -51620735 - RMER19C LTR ERVK 0 611 67 2 918 599 274 78 60 chr17 43651940 43651959 -51620692 + Lx8 LINE L1 7184 7202 -271 2 918 3403 164 78 5 chr17 43651959 43652602 -51620049 - RMER6C LTR ERVK 0 690 1 2 918 599 274 78 60 chr17 43652602 43652865 -51619786 + Lx8 LINE L1 7203 7471 -2 2 918 238 305 40 40 chr17 43654103 43654202 -51618449 - ID_B1 SINE B4 -7 217 119 2 918 306 205 0 37 chr17 43654908 43654989 -51617662 + RMER30 DNA MER1_type 94 171 -31 2 918 297 0 0 0 chr17 43655156 43655189 -51617462 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 918 477 0 0 0 chr17 43655195 43655248 -51617403 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 918 1137 83 0 0 chr17 43655248 43655393 -51617258 - B1_Mus2 SINE Alu -2 145 1 3 918 1049 294 36 11 chr17 43655828 43656192 -51616459 + MTE2a LTR MaLR 4 376 -3 3 918 34 89 0 0 chr17 43656227 43656317 -51616334 + AT_rich Low_complexity Low_complexity 1 90 0 3 918 698 193 0 22 chr17 43656565 43656703 -51615948 - B1_Mur1 SINE Alu -6 143 9 3 918 25 31 0 0 chr17 43656714 43656746 -51615905 + AT_rich Low_complexity Low_complexity 1 32 0 3 918 216 234 78 0 chr17 43656871 43656948 -51615703 - B4 SINE B4 -205 87 5 3 918 258 278 141 58 chr17 43657154 43657395 -51615256 + Charlie18a DNA MER1_type 81 341 -1 3 918 468 91 0 0 chr17 43657459 43657525 -51615126 + (GA)n Simple_repeat Simple_repeat 2 67 0 3 918 797 56 9 0 chr17 43657525 43657632 -51615019 + (GAA)n Simple_repeat Simple_repeat 3 110 0 3 918 666 0 0 0 chr17 43657634 43657708 -51614943 + (GGAGA)n Simple_repeat Simple_repeat 1 74 0 3 918 824 185 11 6 chr17 43657711 43657885 -51614766 + MTC LTR MaLR 223 397 -24 3 918 204 320 67 0 chr17 43657973 43658048 -51614603 + MIRc SINE MIR 86 165 -103 3 918 336 327 71 12 chr17 43658384 43658554 -51614097 + L1M5 LINE L1 5584 5763 -401 3 918 462 65 0 0 chr17 43659007 43659069 -51613582 + (TA)n Simple_repeat Simple_repeat 1 62 0 3 918 238 392 12 65 chr17 43659221 43659249 -51613402 + RMER15 LTR ERVL 403 422 -153 3 918 3055 123 33 206 chr17 43659249 43660157 -51612494 - RMER17A LTR ERVK 0 751 1 3 918 238 392 12 65 chr17 43660157 43660297 -51612354 + RMER15 LTR ERVL 423 562 -13 3 918 911 275 24 86 chr17 43660389 43660679 -51611972 + B4 SINE B4 19 290 -2 3 918 958 268 32 32 chr17 43660929 43661214 -51611437 + B4 SINE B4 2 286 -6 3 918 1079 163 107 15 chr17 43661289 43661495 -51611156 - URR1B DNA MER1_type 0 225 1 3 918 348 210 33 8 chr17 43662043 43662163 -51610488 + CT-rich Low_complexity Low_complexity 3 125 0 3 918 413 319 7 0 chr17 43662168 43662312 -51610339 - ID_B1 SINE B4 0 224 80 3 918 3091 140 21 11 chr17 43662574 43663109 -51609542 - RLTR1D LTR ERV1 -16 589 50 3 918 269 325 86 0 chr17 43663130 43663281 -51609370 + L1MB7 LINE L1 6007 6170 -14 3 918 435 230 40 10 chr17 43663841 43663942 -51608709 - RMER12B LTR ERVK -1297 107 4 3 918 342 0 0 0 chr17 43663944 43663982 -51608669 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 918 553 153 117 0 chr17 43663989 43664100 -51608551 + RMER12B LTR ERVK 1281 1404 0 3 918 945 173 84 52 chr17 43664270 43664520 -51608131 + RLTR20A2 LTR ERVK 1 258 -320 3 918 3262 144 20 36 chr17 43664543 43664975 -51607676 - RMER12 LTR ERVK -725 597 175 3 918 2528 99 47 32 chr17 43664975 43665380 -51607271 - IAPLTR2a LTR ERVK 0 411 1 3 918 3262 144 20 36 chr17 43665380 43665554 -51607097 - RMER12 LTR ERVK -1148 174 1 3 918 297 264 30 122 chr17 43665604 43665768 -51606883 - MTEa LTR MaLR -168 211 63 3 918 276 304 86 77 chr17 43665630 43665851 -51606800 - MLT2B2 LTR ERVL -292 223 1 3 918 718 236 85 17 chr17 43666056 43666233 -51606418 - B3 SINE B2 -27 189 1 3 918 192 231 0 0 chr17 43666735 43666787 -51605864 + GA-rich Low_complexity Low_complexity 1 52 0 3 918 225 0 0 0 chr17 43666937 43666962 -51605689 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 3 918 860 151 27 0 chr17 43667529 43667675 -51604976 - ORR1B2 LTR MaLR -8 359 210 3 918 858 128 200 0 chr17 43668255 43668435 -51604216 - ORR1B2 LTR MaLR -151 216 1 3 918 1519 231 65 11 chr17 43668990 43669341 -51603310 - ORR1D2 LTR MaLR 0 370 1 3 918 778 257 23 0 chr17 43669399 43669574 -51603077 + MTEa LTR MaLR 3 181 -198 3 918 2407 238 134 15 chr17 43669592 43670245 -51602406 + Lx8 LINE L1 6229 6971 -502 3 918 234 0 0 0 chr17 43670245 43670271 -51602380 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 918 1502 266 75 24 chr17 43670271 43670563 -51602088 + Lx8 LINE L1 6972 7267 -206 3 918 608 200 26 0 chr17 43670852 43670967 -51601684 + RSINE1 SINE B4 3 120 -45 3 918 348 64 0 0 chr17 43670967 43671014 -51601637 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 918 248 264 134 41 chr17 43671104 43671298 -51601353 - Charlie5 DNA MER1_type -67 2557 2346 3 918 366 198 11 23 chr17 43672481 43672569 -51600082 + B1F SINE Alu 53 139 -10 3 918 476 252 10 0 chr17 43673376 43673475 -51599176 + PB1D10 SINE Alu 1 100 -17 3 918 479 17 17 0 chr17 43673476 43673536 -51599115 + (GA)n Simple_repeat Simple_repeat 2 62 0 3 918 192 217 0 0 chr17 43673536 43673582 -51599069 + GA-rich Low_complexity Low_complexity 4 49 0 3 918 387 0 0 0 chr17 43673771 43673814 -51598837 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 918 390 256 116 109 chr17 43674372 43674657 -51597994 + RMER10A LTR ERVL 12 298 -144 3 918 207 0 0 0 chr17 43674907 43674930 -51597721 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 3 918 928 129 0 0 chr17 43674930 43675062 -51597589 - B1_Mus1 SINE Alu -13 135 4 3 918 312 256 76 53 chr17 43675078 43675210 -51597441 - B1F SINE Alu -3 146 12 3 918 1233 81 92 0 chr17 43675509 43675682 -51596969 + B2_Mm2 SINE B2 2 190 -5 3 918 241 88 0 0 chr17 43675686 43675720 -51596931 + URR1B DNA MER1_type 192 225 0 3 918 222 37 0 0 chr17 43676380 43676407 -51596244 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 918 6322 214 87 24 chr17 43676582 43677054 -51595597 + Lx6 LINE L1 5668 6160 -1300 3 918 324 0 0 0 chr17 43677054 43677090 -51595561 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 918 6322 214 88 24 chr17 43677090 43678156 -51594495 + Lx6 LINE L1 6161 7560 -136 3 918 371 252 112 22 chr17 43678225 43678359 -51594292 + Lx7 LINE L1 7206 7351 -345 3 918 22 56 0 0 chr17 43678626 43678662 -51593989 + AT_rich Low_complexity Low_complexity 1 36 0 3 918 322 325 75 50 chr17 43678691 43678795 -51593856 + RSINE1 SINE B4 43 152 -13 3 918 504 0 0 0 chr17 43678795 43678851 -51593800 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 918 189 0 0 0 chr17 43678851 43678871 -51593780 + (GA)n Simple_repeat Simple_repeat 2 22 0 3 918 322 325 75 50 chr17 43678871 43678885 -51593766 + RSINE1 SINE B4 153 164 -1 3 918 351 0 0 0 chr17 43679060 43679099 -51593552 + (TGG)n Simple_repeat Simple_repeat 3 41 0 3 918 659 219 0 0 chr17 43679100 43679223 -51593428 + B1_Mus2 SINE Alu 19 141 -6 3 918 1049 81 0 7 chr17 43679223 43679373 -51593278 + (GGA)n Simple_repeat Simple_repeat 2 150 0 3 918 1044 64 0 0 chr17 43679737 43679878 -51592773 + (TG)n Simple_repeat Simple_repeat 2 142 0 3 918 481 276 131 15 chr17 43679880 43680046 -51592605 - B3A SINE B2 -47 169 2 3 918 432 0 0 0 chr17 43680707 43680755 -51591896 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 918 4678 166 78 8 chr17 43681102 43681950 -51590701 - RMER13B LTR ERVK 0 908 2 3 918 827 247 75 40 chr17 43682037 43682315 -51590336 + B4 SINE B4 5 292 0 3 918 208 211 0 0 chr17 43682325 43682363 -51590288 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 918 607 324 76 50 chr17 43682730 43683034 -51589617 + Charlie1a DNA MER1_type 758 1068 -387 3 918 279 0 0 0 chr17 43683040 43683071 -51589580 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 918 986 97 0 46 chr17 43683071 43683216 -51589435 - B1_Mur4 SINE Alu -11 139 1 3 918 607 324 76 50 chr17 43683216 43683411 -51589240 + Charlie1a DNA MER1_type 1069 1270 -185 3 918 448 272 61 0 chr17 43683542 43683656 -51588995 + B3A SINE B2 2 122 -76 3 918 330 200 113 49 chr17 43683707 43683849 -51588802 + Charlie1a DNA MER1_type 1299 1449 -6 3 918 309 233 14 0 chr17 43684010 43684083 -51588568 + MER5A DNA MER1_type 55 128 -61 3 918 235 344 11 0 chr17 43686031 43686121 -51586530 - MER5A1 DNA MER1_type -27 139 49 3 918 204 140 0 57 chr17 43686187 43686240 -51586411 + A-rich Low_complexity Low_complexity 4 53 0 3 918 803 180 0 80 chr17 43686623 43686786 -51585865 + B1_Mur4 SINE Alu 1 150 0 3 918 183 42 0 0 chr17 43686821 43686845 -51585806 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 918 649 299 56 39 chr17 43686938 43687223 -51585428 + B4 SINE B4 2 291 -1 3 918 1665 184 72 46 chr17 43687223 43687640 -51585011 + RMER10A LTR ERVL 1 428 -14 3 918 327 25 0 0 chr17 43687643 43687683 -51584968 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 918 235 352 35 0 chr17 43687744 43687889 -51584762 + L1MB7 LINE L1 5869 6018 -160 3 918 279 259 35 0 chr17 43687900 43687985 -51584666 + L1MB7 LINE L1 6068 6155 -29 3 918 303 231 0 49 chr17 43688820 43688902 -51583749 + CT-rich Low_complexity Low_complexity 5 82 0 3 918 1018 218 86 22 chr17 43688902 43689285 -51583366 + Lx4B LINE L1 6571 6963 -37 3 918 198 103 0 0 chr17 43689290 43689319 -51583332 + (CAAT)n Simple_repeat Simple_repeat 3 31 0 3 918 846 106 0 0 chr17 43689390 43689522 -51583129 + (TG)n Simple_repeat Simple_repeat 2 133 0 3 918 298 253 141 11 chr17 43689536 43689628 -51583023 - B4A SINE B4 -60 232 129 3 918 189 0 0 0 chr17 43689670 43689691 -51582960 + (CCCA)n Simple_repeat Simple_repeat 3 23 0 3 918 378 385 53 21 chr17 43690154 43690528 -51582123 + MLT2B3 LTR ERVL 168 553 -1 3 918 261 332 160 36 chr17 43690725 43691118 -51581533 - L2 LINE L2 -539 2880 2439 3 918 586 309 66 9 chr17 43692116 43692328 -51580323 + ID_B1 SINE B4 1 224 0 3 918 888 254 38 31 chr17 43693820 43694027 -51578624 - B4 SINE B4 -1 291 81 3 918 546 108 0 0 chr17 43694027 43694110 -51578541 + (TTG)n Simple_repeat Simple_repeat 2 84 0 3 918 888 254 38 31 chr17 43694110 43694190 -51578461 - B4 SINE B4 -212 80 2 3 918 234 389 24 43 chr17 43694571 43694778 -51577873 + LTR33 LTR ERVL 253 455 -60 3 918 248 367 6 19 chr17 43695144 43695305 -51577346 + L1M5 LINE L1 5607 5765 -359 3 918 313 273 52 52 chr17 43696369 43696485 -51576166 - ID_B1 SINE B4 -2 222 107 3 918 221 309 84 49 chr17 43696485 43696508 -51576143 - B1_Mur1 SINE Alu -1 144 1 3 918 919 133 28 0 chr17 43696671 43696814 -51575837 - B1_Mur4 SINE Alu -3 147 1 3 918 34 0 0 0 chr17 43696823 43696857 -51575794 + AT_rich Low_complexity Low_complexity 1 34 0 3 918 627 178 16 0 chr17 43696930 43697059 -51575592 + RLTR14 LTR ERV1 1 131 -251 4 918 497 16 16 0 chr17 43697059 43697121 -51575530 + (TC)n Simple_repeat Simple_repeat 2 64 0 4 918 688 146 8 16 chr17 43697131 43697256 -51575395 + RLTR14-int LTR ERV1 406 529 -4788 4 918 513 244 161 47 chr17 43697256 43697578 -51575073 - RLTR15 LTR ERVK 0 359 1 4 918 3130 161 106 73 chr17 43697580 43697625 -51575026 + RLTR14-int LTR ERV1 526 567 -4750 4 918 288 0 0 0 chr17 43697625 43697657 -51574994 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 918 3130 161 106 73 chr17 43697657 43697962 -51574689 + RLTR14-int LTR ERV1 568 924 -4393 4 918 351 0 0 0 chr17 43697962 43698001 -51574650 + (TAA)n Simple_repeat Simple_repeat 3 41 0 4 918 3130 161 106 73 chr17 43698001 43698311 -51574340 + RLTR14-int LTR ERV1 925 1217 -4100 4 918 180 0 0 0 chr17 43698311 43698331 -51574320 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 918 3130 161 106 73 chr17 43698331 43698406 -51574245 + RLTR14-int LTR ERV1 1218 1287 -4030 4 918 3437 195 24 74 chr17 43698511 43699296 -51573355 + RLTR14-int LTR ERV1 1302 2047 -3270 4 918 1538 233 44 151 chr17 43699314 43699923 -51572728 - RMER19C LTR ERVK -47 564 28 4 918 288 0 0 0 chr17 43699923 43699955 -51572696 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 4 918 1538 233 44 151 chr17 43699955 43699976 -51572675 - RMER19C LTR ERVK -584 27 3 4 918 2544 152 37 30 chr17 43699977 43700215 -51572436 + RLTR14-int LTR ERV1 2944 3175 -2142 4 918 1622 37 0 0 chr17 43700215 43700402 -51572249 - B2_Mm1a SINE B2 -6 187 1 4 918 2544 152 37 30 chr17 43700402 43700596 -51572055 + RLTR14-int LTR ERV1 3176 3379 -1938 4 918 618 107 0 0 chr17 43700636 43700720 -51571931 + RLTR14-int LTR ERV1 4406 4489 -828 4 918 3116 137 90 31 chr17 43700815 43701592 -51571059 + RLTR14-int LTR ERV1 4485 5307 -10 4 918 2127 159 19 21 chr17 43701595 43701974 -51570677 + RLTR14 LTR ERV1 5 382 0 4 918 1443 176 42 16 chr17 43702452 43702763 -51569888 - RLTR24 LTR ERV1 -1 528 210 4 918 292 300 57 16 chr17 43703034 43703156 -51569495 + RMER10B LTR ERVL 272 398 0 4 918 474 142 74 130 chr17 43703156 43703315 -51569336 - RLTR24 LTR ERV1 -260 269 120 4 918 1180 75 0 0 chr17 43703675 43703822 -51568829 + B1_Mus2 SINE Alu 1 147 0 4 918 534 125 192 0 chr17 43704045 43704149 -51568502 - RLTR24 LTR ERV1 -405 124 1 4 918 233 315 0 0 chr17 43704149 43704202 -51568449 - ID4 SINE ID -29 54 2 4 918 655 202 15 8 chr17 43704246 43704376 -51568275 + RLTR28B LTR ERVL 2 132 -349 4 918 696 252 43 47 chr17 43704552 43704806 -51567845 - RMER15 LTR ERVL -8 567 315 4 918 182 37 37 0 chr17 43704874 43704901 -51567750 + (CCCCCG)n Simple_repeat Simple_repeat 2 29 0 4 918 47 0 0 0 chr17 43706166 43706213 -51566438 + AT_rich Low_complexity Low_complexity 1 47 0 4 918 597 100 0 0 chr17 43706272 43706362 -51566289 + (GGAA)n Simple_repeat Simple_repeat 1 90 0 4 918 396 0 0 0 chr17 43706462 43706506 -51566145 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 918 235 309 115 26 chr17 43707175 43707288 -51565363 - ID_B1 SINE B4 -45 179 57 4 918 585 200 0 26 chr17 43707312 43707425 -51565226 - B3 SINE B2 -106 110 1 4 918 204 97 0 0 chr17 43707666 43707697 -51564954 + (T)n Simple_repeat Simple_repeat 1 31 0 4 918 1217 55 0 0 chr17 43707699 43707845 -51564806 - B1_Mm SINE Alu 0 147 2 4 918 368 202 56 25 chr17 43707951 43708113 -51564538 + (TTATA)n Simple_repeat Simple_repeat 5 171 0 4 918 402 176 47 29 chr17 43708060 43708309 -51564342 + (TATAA)n Simple_repeat Simple_repeat 1 253 0 4 918 433 309 14 14 chr17 43708500 43708638 -51564013 + B1F SINE Alu 10 147 -2 4 918 225 222 30 45 chr17 43708642 43708708 -51563943 + ID4 SINE ID 2 66 -17 4 918 244 203 17 17 chr17 43708717 43708777 -51563874 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 4 918 252 0 0 0 chr17 43708862 43708890 -51563761 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 4 918 642 265 95 20 chr17 43709012 43709212 -51563439 - B3 SINE B2 0 216 2 4 918 206 383 16 28 chr17 43709359 43709614 -51563037 - L2 LINE L2 -422 2997 2746 4 918 211 261 43 0 chr17 43709696 43709761 -51562890 + MIR SINE MIR 97 175 -93 4 918 712 269 63 19 chr17 43709986 43710191 -51562460 + B4 SINE B4 6 219 -73 4 918 189 0 0 0 chr17 43710350 43710371 -51562280 + (CACAA)n Simple_repeat Simple_repeat 4 24 0 4 918 251 54 0 26 chr17 43711115 43711153 -51561498 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 918 368 344 18 18 chr17 43711165 43711328 -51561323 - B4A SINE B4 -16 276 114 4 918 217 286 16 0 chr17 43711341 43711404 -51561247 - B4A SINE B4 -227 65 2 4 918 281 344 15 23 chr17 43711479 43711610 -51561041 + Charlie8 DNA MER1_type 96 225 -2203 4 918 435 312 50 25 chr17 43712163 43712324 -51560327 + MER20 DNA MER1_type 1 165 -54 4 918 257 270 40 0 chr17 43712366 43712440 -51560211 + MIRc SINE MIR 39 115 -153 4 918 601 297 87 52 chr17 43712820 43713072 -51559579 + Tigger7 DNA MER2_type 70 330 -2161 4 918 804 241 63 10 chr17 43713202 43713407 -51559244 - B3 SINE B2 0 216 1 4 918 1895 151 11 146 chr17 43713926 43714400 -51558251 - RMER17C LTR ERVK 0 410 1 4 918 686 327 14 33 chr17 43714432 43714707 -51557944 - B4 SINE B4 -19 273 4 4 918 240 214 0 0 chr17 43715739 43715795 -51556856 + CT-rich Low_complexity Low_complexity 3 58 0 4 918 331 102 10 83 chr17 43716172 43716268 -51556383 + T-rich Low_complexity Low_complexity 3 91 0 4 918 597 134 69 35 chr17 43716270 43716386 -51556265 - B1_Mur4 SINE Alu -1 149 30 4 918 267 292 34 42 chr17 43716750 43716868 -51555783 - PB1D10 SINE Alu 0 117 1 4 918 232 238 0 45 chr17 43716992 43717058 -51555593 + GA-rich Low_complexity Low_complexity 1 63 0 4 918 536 135 9 0 chr17 43717061 43717172 -51555479 + (TG)n Simple_repeat Simple_repeat 2 113 0 4 918 218 81 27 0 chr17 43719074 43719111 -51553540 + (AGGGGG)n Simple_repeat Simple_repeat 5 42 0 4 918 356 255 170 20 chr17 43719111 43719211 -51553440 - ID_B1 SINE B4 -25 199 85 4 918 342 265 0 184 chr17 43719242 43719316 -51553335 - B1F SINE Alu -17 132 78 4 918 1278 27 0 0 chr17 43719316 43719462 -51553189 - B1_Mm SINE Alu 0 147 2 4 918 342 271 0 181 chr17 43719462 43719528 -51553123 - B1F SINE Alu -72 77 16 4 918 405 0 0 0 chr17 43720370 43720415 -51552236 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 918 463 297 127 41 chr17 43720435 43720702 -51551949 - B4 SINE B4 -2 290 1 4 918 430 248 85 9 chr17 43720724 43720830 -51551821 + ID_B1 SINE B4 100 213 -11 4 918 1585 48 0 0 chr17 43720868 43721054 -51551597 + B2_Mm1a SINE B2 2 187 -6 4 918 342 0 0 0 chr17 43721715 43721753 -51550898 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 918 532 309 21 52 chr17 43721765 43721956 -51550695 - B4A SINE B4 -1 291 107 4 918 738 246 122 84 chr17 43721971 43722340 -51550311 - MTD LTR MaLR -31 388 6 4 918 225 241 55 44 chr17 43722362 43722453 -51550198 - B4A SINE B4 -198 94 3 4 918 294 274 0 0 chr17 43722491 43722564 -51550087 + U4 snRNA snRNA 3 75 -70 4 918 216 0 0 0 chr17 43723045 43723069 -51549582 + (CCCCCA)n Simple_repeat Simple_repeat 6 29 0 4 918 187 182 0 0 chr17 43724023 43724056 -51548595 - MIRb SINE MIR -14 254 222 4 918 199 296 37 0 chr17 43724600 43724654 -51547997 - L2 LINE L2 -678 2741 2686 4 918 750 259 76 0 chr17 43724718 43724915 -51547736 - ID_B1 SINE B4 -9 215 4 4 918 492 314 116 62 chr17 43725715 43725990 -51546661 + B4A SINE B4 2 291 -1 4 918 219 215 0 0 chr17 43726025 43726090 -51546561 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 918 207 0 0 0 chr17 43726171 43726194 -51546457 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 918 588 349 64 4 chr17 43727554 43727790 -51544861 - B4A SINE B4 -19 273 24 4 918 212 218 91 0 chr17 43727800 43727855 -51544796 - PB1D7 SINE Alu 0 120 61 4 918 502 269 15 0 chr17 43727806 43727936 -51544715 - ID_B1 SINE B4 -6 218 87 4 918 237 215 60 30 chr17 43729299 43729366 -51543285 - MER5A1 DNA MER1_type -92 74 6 4 918 1941 144 12 6 chr17 43729963 43730298 -51542353 + RLTR31A_Mm LTR ERVK 1 337 -247 4 918 465 126 0 19 chr17 43730508 43730590 -51542061 + B1_Mus2 SINE Alu 39 139 -8 4 918 651 260 133 23 chr17 43730839 43731095 -51541556 + B4A SINE B4 1 284 -8 4 918 216 167 0 0 chr17 43732016 43732052 -51540599 + T-rich Low_complexity Low_complexity 4 39 0 4 918 722 266 133 16 chr17 43732084 43732340 -51540311 - B4 SINE B4 -4 288 3 4 918 180 0 0 0 chr17 43732418 43732438 -51540213 + (GGATG)n Simple_repeat Simple_repeat 4 23 0 4 918 254 276 0 33 chr17 43732527 43732617 -51540034 - RLTR17 LTR ERVK -482 210 124 4 918 758 239 32 11 chr17 43734768 43734958 -51537693 + B3A SINE B2 1 194 -4 4 918 1176 107 0 0 chr17 43735409 43735653 -51536998 + (TG)n Simple_repeat Simple_repeat 1 244 0 4 918 348 258 67 45 chr17 43735742 43735876 -51536775 - MER20 DNA MER1_type -5 214 78 4 918 559 274 39 142 chr17 43736332 43736741 -51535910 - RMER20B LTR ERVK -25 602 236 4 918 328 248 127 9 chr17 43736963 43737073 -51535578 - MIR SINE MIR -86 176 54 4 918 186 167 0 0 chr17 43737084 43737120 -51535531 + T-rich Low_complexity Low_complexity 2 37 0 4 918 215 283 0 0 chr17 43737148 43737194 -51535457 - ID4_ SINE ID -36 47 2 4 918 189 0 0 0 chr17 43737255 43737276 -51535375 + (T)n Simple_repeat Simple_repeat 1 21 0 4 918 706 291 72 72 chr17 43737845 43738164 -51534487 - Lx6 LINE L1 -27 7433 7115 4 918 293 188 50 40 chr17 43738170 43738270 -51534381 + (TATATG)n Simple_repeat Simple_repeat 2 102 0 4 918 220 231 13 13 chr17 43738276 43738355 -51534296 + (TA)n Simple_repeat Simple_repeat 2 80 0 4 918 821 38 9 0 chr17 43738373 43738478 -51534173 + (TATATG)n Simple_repeat Simple_repeat 2 107 0 4 918 576 179 21 7 chr17 43738495 43738636 -51534015 + (CATA)n Simple_repeat Simple_repeat 2 144 0 4 918 696 222 118 0 chr17 43738636 43738789 -51533862 - Lx6 LINE L1 -490 6970 6800 4 918 659 207 2 0 chr17 43738873 43739007 -51533644 + B1_Mus2 SINE Alu 3 138 -11 4 918 409 299 0 87 chr17 43739007 43739023 -51533628 + ID_B1 SINE B4 84 220 -4 4 918 429 20 0 0 chr17 43739422 43739472 -51533179 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 918 995 246 38 118 chr17 43739988 43740385 -51532266 + MTE2a LTR MaLR 1 365 -14 4 918 423 0 0 0 chr17 43740418 43740465 -51532186 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 918 423 0 0 0 chr17 43741253 43741300 -51531351 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 918 207 0 0 0 chr17 43741411 43741434 -51531217 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 4 918 406 88 14 14 chr17 43741725 43741794 -51530857 + (TA)n Simple_repeat Simple_repeat 2 70 0 5 918 842 286 14 14 chr17 43741798 43742011 -51530640 - B3 SINE B2 -2 214 2 5 918 1107 283 82 25 chr17 43742097 43742535 -51530116 - L1_Mur3 LINE L1 -189 5691 5229 5 918 30 27 0 0 chr17 43743256 43743293 -51529358 + AT_rich Low_complexity Low_complexity 1 37 0 5 918 441 138 0 0 chr17 43743332 43743426 -51529225 + (TC)n Simple_repeat Simple_repeat 2 95 0 5 918 390 21 0 0 chr17 43743433 43743480 -51529171 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 918 423 269 201 0 chr17 43743480 43743606 -51529045 - B3A SINE B2 -39 159 7 5 918 502 257 129 0 chr17 43743746 43743886 -51528765 + B3A SINE B2 4 161 -37 5 918 1656 208 43 77 chr17 43744649 43744794 -51527857 - RLTR11A2 LTR ERVK -28 499 365 5 918 1206 54 0 0 chr17 43744794 43744941 -51527710 + B1_Mus2 SINE Alu 1 147 0 5 918 1656 208 43 77 chr17 43744941 43745312 -51527339 - RLTR11A2 LTR ERVK -163 364 1 5 918 4206 169 178 22 chr17 43745650 43746527 -51526124 - RMER1B Other Other -4 1062 49 5 918 836 194 93 16 chr17 43746599 43746782 -51525869 - B3 SINE B2 -19 197 1 5 918 605 257 0 19 chr17 43747053 43747208 -51525443 + B3A SINE B2 23 174 -24 5 918 400 71 0 0 chr17 43747334 43747390 -51525261 + L1_Mus2 LINE L1 6510 6565 -1 5 918 390 376 91 9 chr17 43747443 43747663 -51524988 + Tigger7 DNA MER2_type 24 261 -2230 5 918 306 0 0 0 chr17 43747769 43747803 -51524848 + (TC)n Simple_repeat Simple_repeat 2 35 0 5 918 21 0 0 0 chr17 43747840 43747861 -51524790 + AT_rich Low_complexity Low_complexity 1 21 0 5 918 792 201 84 35 chr17 43747866 43748093 -51524558 + MTD LTR MaLR 182 419 0 5 918 189 0 0 0 chr17 43748974 43748995 -51523656 + (GA)n Simple_repeat Simple_repeat 1 21 0 5 918 222 37 0 0 chr17 43748995 43749021 -51523630 + (CG)n Simple_repeat Simple_repeat 1 27 0 5 918 771 144 20 61 chr17 43749754 43749902 -51522749 + B1_Mus2 SINE Alu 1 142 -5 5 918 336 77 0 0 chr17 43749906 43749958 -51522693 + (GA)n Simple_repeat Simple_repeat 1 52 0 5 918 387 0 0 0 chr17 43750164 43750207 -51522444 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 918 704 123 79 0 chr17 43750518 43750632 -51522019 - B1_Mus1 SINE Alu 0 148 26 5 918 695 161 0 6 chr17 43750822 43751003 -51521648 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 918 619 234 21 59 chr17 43751003 43751189 -51521462 - B3A SINE B2 -16 182 4 5 918 613 217 72 0 chr17 43751244 43751382 -51521269 - B1_Mur1 SINE Alu 0 149 2 5 918 221 368 23 11 chr17 43751705 43751793 -51520858 + RSINE1 SINE B4 45 133 -32 5 918 225 94 0 0 chr17 43751798 43751830 -51520821 + (CG)n Simple_repeat Simple_repeat 2 33 0 5 918 468 35 0 0 chr17 43751972 43752030 -51520621 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 918 706 184 15 0 chr17 43752086 43752222 -51520429 - B1_Mur2 SINE Alu 0 149 12 5 918 483 18 0 0 chr17 43752914 43752970 -51519681 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 918 1285 220 81 20 chr17 43753062 43753457 -51519194 + MTD LTR MaLR 1 419 0 5 918 233 266 178 39 chr17 43753713 43753842 -51518809 - RSINE1 SINE B4 -17 148 2 5 918 343 198 74 0 chr17 43754485 43754566 -51518085 + ID_B1 SINE B4 84 170 -54 5 918 393 246 22 12 chr17 43754580 43754683 -51517968 + Lx8 LINE L1 6928 7022 -451 5 918 377 325 113 14 chr17 43754684 43754959 -51517692 + Lx8 LINE L1 7113 7414 -59 5 918 456 123 0 0 chr17 43755204 43755277 -51517374 + (CA)n Simple_repeat Simple_repeat 1 73 0 5 918 385 259 116 153 chr17 43755644 43755945 -51516706 + B4 SINE B4 1 290 -2 5 918 709 282 84 25 chr17 43756124 43756444 -51516207 + L1MEf LINE L1 411 749 -5451 5 918 216 284 51 102 chr17 43756722 43756753 -51515898 - B2_Mm2 SINE B2 -6 189 162 5 918 459 0 0 0 chr17 43756753 43756804 -51515847 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 918 541 294 18 6 chr17 43756804 43756968 -51515683 - B3A SINE B2 -29 169 4 5 918 699 12 0 0 chr17 43757015 43757095 -51515556 + (TCTA)n Simple_repeat Simple_repeat 2 81 0 5 918 763 239 90 33 chr17 43757590 43757802 -51514849 + ID_B1 SINE B4 1 224 0 5 918 518 150 36 45 chr17 43758060 43758172 -51514479 + PB1D9 SINE Alu 9 119 -1 5 918 465 19 0 0 chr17 43758274 43758328 -51514323 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 918 531 191 9 164 chr17 43758492 43758711 -51513940 - B3A SINE B2 -12 186 2 5 918 21 36 0 0 chr17 43759333 43759361 -51513290 + AT_rich Low_complexity Low_complexity 1 28 0 5 918 579 284 79 18 chr17 43759579 43759808 -51512843 - L1MA4A LINE L1 -377 5926 5684 5 918 999 209 265 41 chr17 43759808 43760138 -51512513 + MTC LTR MaLR 1 404 -15 5 918 515 272 155 39 chr17 43760150 43760592 -51512059 - L1MA4A LINE L1 -647 5653 5176 5 918 709 259 32 5 chr17 43760615 43760801 -51511850 - B3A SINE B2 0 198 8 5 918 219 222 0 0 chr17 43765714 43765759 -51506892 + CT-rich Low_complexity Low_complexity 3 47 0 5 918 556 294 0 33 chr17 43768603 43768754 -51503897 + B3A SINE B2 1 146 -52 5 918 405 0 0 0 chr17 43768755 43768800 -51503851 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 918 289 222 0 0 chr17 43768836 43768890 -51503761 + B3 SINE B2 67 120 -96 5 918 210 345 113 17 chr17 43769154 43769269 -51503382 + L2a LINE L2 3286 3411 -15 5 918 540 205 9 35 chr17 43769777 43769893 -51502758 + B1_Mur4 SINE Alu 10 122 -28 5 918 895 181 112 15 chr17 43770714 43770910 -51501741 - B3 SINE B2 0 216 2 5 918 592 244 53 0 chr17 43771124 43771255 -51501396 + B1_Mur2 SINE Alu 2 139 -10 5 918 475 288 40 27 chr17 43771668 43771818 -51500833 + RSINE1 SINE B4 8 159 -6 5 918 384 343 26 29 chr17 43771939 43772159 -51500492 + L1MD LINE L1 5595 5822 -622 5 918 629 171 139 81 chr17 43772624 43772712 -51499939 + URR1A DNA MER1_type 1 111 -115 5 918 2871 49 6 0 chr17 43772712 43773056 -51499595 + ORR1A1 LTR MaLR 1 346 0 5 918 629 171 139 81 chr17 43773056 43773139 -51499512 + URR1A DNA MER1_type 112 182 -44 5 918 2596 148 51 11 chr17 43773109 43773269 -51499382 - RLTR19 LTR ERVK -6 493 331 5 918 191 36 0 35 chr17 43773269 43773298 -51499353 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 5 918 2596 148 51 11 chr17 43773298 43773609 -51499042 - RLTR19 LTR ERVK -169 330 4 5 918 266 93 222 0 chr17 43773611 43773665 -51498986 + URR1A DNA MER1_type 160 225 -1 5 918 443 265 26 39 chr17 43773667 43773820 -51498831 - RLTR14 LTR ERV1 -2 380 230 5 918 195 42 0 0 chr17 43774663 43774687 -51497964 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 918 240 100 0 0 chr17 43775173 43775213 -51497438 - Lx4B LINE L1 -4 7054 7015 5 918 1580 225 18 86 chr17 43775214 43775705 -51496946 - RMER19C LTR ERVK -1 610 153 5 918 340 262 153 21 chr17 43775817 43775961 -51496690 - RSINE1 SINE B4 0 165 3 5 918 554 221 14 56 chr17 43777175 43777319 -51495332 - ID_B1 SINE B4 0 224 87 5 918 24 32 0 0 chr17 43777458 43777489 -51495162 + AT_rich Low_complexity Low_complexity 1 31 0 5 918 28 29 0 0 chr17 43777591 43777626 -51495025 + AT_rich Low_complexity Low_complexity 1 35 0 5 918 228 200 0 0 chr17 43777661 43777711 -51494940 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 5 114 1193 170 14 28 chr17 43777841 43778059 -51494592 + B3 SINE B2 2 216 0 5 919 237 178 0 0 chr17 43778248 43778293 -51494358 + A-rich Low_complexity Low_complexity 35 79 0 5 919 427 45 15 15 chr17 43779536 43779603 -51493048 + (TC)n Simple_repeat Simple_repeat 2 68 0 5 919 216 0 0 0 chr17 43780723 43780747 -51491904 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 919 555 16 0 0 chr17 43780885 43780949 -51491702 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 919 212 162 4 4 chr17 43780957 43781001 -51491650 - MIRc SINE MIR -113 163 117 5 919 264 274 74 105 chr17 43782200 43782457 -51490194 + ORR1E LTR MaLR 110 358 -1 5 919 192 40 0 0 chr17 43783323 43783348 -51489303 + (TCTCTG)n Simple_repeat Simple_repeat 6 30 0 5 919 204 125 0 0 chr17 43783767 43783799 -51488852 + (A)n Simple_repeat Simple_repeat 1 32 0 5 919 632 257 19 45 chr17 43784965 43785120 -51487531 + RSINE1 SINE B4 11 161 -4 5 919 740 104 8 0 chr17 43785128 43785262 -51487389 + (TC)n Simple_repeat Simple_repeat 2 136 0 5 919 351 0 0 0 chr17 43785262 43785301 -51487350 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 919 21 0 0 0 chr17 43785688 43785709 -51486942 + AT_rich Low_complexity Low_complexity 1 21 0 5 919 544 198 175 7 chr17 43786334 43786512 -51486139 + B3A SINE B2 9 216 0 5 919 226 315 157 65 chr17 43787532 43787780 -51484871 - L2 LINE L2 -646 2773 2503 5 919 242 246 104 30 chr17 43789763 43789830 -51482821 - PB1D10 SINE Alu -8 109 38 5 919 2181 186 116 19 chr17 43790515 43791042 -51481609 - RMER4B LTR ERVK -7 578 1 5 919 770 270 29 5 chr17 43791767 43791972 -51480679 - B3 SINE B2 -4 212 3 5 919 429 302 0 0 chr17 43792020 43792116 -51480535 - PB1D10 SINE Alu -20 97 2 5 919 308 238 11 116 chr17 43792036 43792131 -51480520 - MT2B LTR ERVL -362 239 155 5 919 1356 29 52 0 chr17 43792228 43792400 -51480251 - L1_Mus1 LINE L1 -2 6565 6385 5 919 1274 40 0 13 chr17 43792400 43792553 -51480098 - L1_Mus1 LINE L1 -287 6280 6130 5 919 1539 69 5 0 chr17 43792545 43792748 -51479903 + L1_Mus1 LINE L1 5934 6137 -430 5 919 328 275 25 0 chr17 43792884 43792964 -51479687 + ID4 SINE ID 2 83 0 5 919 1116 163 64 0 chr17 43793020 43793222 -51479429 + B3 SINE B2 2 216 0 5 919 650 157 0 8 chr17 43793571 43793693 -51478958 + CT-rich Low_complexity Low_complexity 1 121 0 5 919 300 111 0 0 chr17 43794096 43794141 -51478510 + (TCC)n Simple_repeat Simple_repeat 2 46 0 5 919 228 150 0 0 chr17 43794141 43794181 -51478470 + (TC)n Simple_repeat Simple_repeat 1 40 0 6 919 460 246 42 0 chr17 43794181 43794323 -51478328 - B1F SINE Alu -1 148 1 6 919 613 237 9 118 chr17 43795506 43795726 -51476925 - B3A SINE B2 -2 196 1 6 919 355 308 0 0 chr17 43796042 43796172 -51476479 + GA-rich Low_complexity Low_complexity 1 130 0 6 919 324 286 12 0 chr17 43796187 43796271 -51476380 - RSINE1 SINE B4 -50 115 31 6 919 308 238 0 0 chr17 43796849 43796929 -51475722 + A-rich Low_complexity Low_complexity 1 80 0 6 919 192 77 0 0 chr17 43797339 43797365 -51475286 + (A)n Simple_repeat Simple_repeat 1 26 0 6 919 704 12 12 0 chr17 43797671 43797756 -51474895 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 6 919 1303 205 202 11 chr17 43797777 43798128 -51474523 + MTD LTR MaLR 1 418 -1 6 919 327 261 43 11 chr17 43798198 43798214 -51474437 - PB1D10 SINE Alu -8 109 14 6 919 334 263 0 13 chr17 43798214 43798291 -51474360 - ID_B1 SINE B4 -54 170 95 6 919 213 94 0 0 chr17 43798474 43798506 -51474145 + (TATAA)n Simple_repeat Simple_repeat 5 36 0 6 919 1155 58 0 0 chr17 43798950 43799089 -51473562 - B1_Mus1 SINE Alu -9 139 1 6 919 216 0 0 0 chr17 43799143 43799167 -51473484 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 6 919 1692 131 101 7 chr17 43799378 43799685 -51472966 + ORR1B1 LTR MaLR 1 336 -58 6 919 207 0 0 0 chr17 43800033 43800056 -51472595 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 919 21 0 0 0 chr17 43801534 43801555 -51471096 + AT_rich Low_complexity Low_complexity 1 21 0 6 919 306 0 0 0 chr17 43802218 43802252 -51470399 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 919 192 77 0 0 chr17 43802983 43803009 -51469642 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 6 919 180 0 0 0 chr17 43804274 43804294 -51468357 + (CAGCC)n Simple_repeat Simple_repeat 4 23 0 6 919 279 0 0 0 chr17 43804307 43804338 -51468313 + (T)n Simple_repeat Simple_repeat 1 31 0 6 919 180 0 0 0 chr17 43805222 43805242 -51467409 + (T)n Simple_repeat Simple_repeat 1 20 0 6 919 271 93 0 44 chr17 43805422 43805467 -51467184 + B4A SINE B4 188 230 -62 6 919 705 260 0 0 chr17 43805467 43805613 -51467038 + RSINE1 SINE B4 3 148 -17 6 919 854 285 4 26 chr17 43805745 43806015 -51466636 - B4A SINE B4 -20 272 9 6 919 2768 148 52 4 chr17 43806176 43806652 -51465999 + RLTR19 LTR ERVK 1 499 0 6 919 378 0 0 0 chr17 43807057 43807099 -51465552 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 919 2112 74 31 31 chr17 43807321 43807641 -51465010 - L1_Mus2 LINE L1 0 6566 6247 6 919 644 257 73 0 chr17 43808228 43808407 -51464244 + B4A SINE B4 101 292 0 6 919 815 126 0 89 chr17 43809275 43809432 -51463219 + B1_Mus1 SINE Alu 6 148 0 6 919 554 287 169 19 chr17 43809455 43809601 -51463050 + L1MD1 LINE L1 4518 4677 -1469 6 919 198 0 0 0 chr17 43809601 43809623 -51463028 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 6 919 554 287 169 19 chr17 43809623 43809838 -51462813 + L1MD1 LINE L1 4678 4932 -1214 6 919 187 106 42 21 chr17 43809919 43809967 -51462684 + A-rich Low_complexity Low_complexity 2 50 0 6 919 276 371 38 0 chr17 43810072 43810231 -51462420 + L1MD1 LINE L1 5098 5262 -884 6 919 450 302 173 37 chr17 43810331 43810868 -51461783 + L1MD1 LINE L1 5497 6106 -136 6 919 1326 64 0 0 chr17 43811436 43811609 -51461042 + (TG)n Simple_repeat Simple_repeat 2 174 0 6 919 496 266 152 79 chr17 43811906 43812249 -51460402 - MTE2a LTR MaLR -6 373 6 6 919 21 0 0 0 chr17 43812975 43812996 -51459655 + AT_rich Low_complexity Low_complexity 1 21 0 6 919 344 176 11 32 chr17 43812998 43813092 -51459559 - Lx4B LINE L1 -17 7041 6950 6 919 633 287 10 72 chr17 43813237 43813254 -51459397 - B3A SINE B2 -4 194 182 6 919 483 18 0 0 chr17 43813254 43813310 -51459341 + (GA)n Simple_repeat Simple_repeat 2 57 0 6 919 633 287 10 72 chr17 43813310 43813487 -51459164 - B3A SINE B2 -17 181 12 6 919 526 164 80 29 chr17 43813489 43813627 -51459024 + MTEa LTR MaLR 183 327 -52 6 919 224 30 30 0 chr17 43813631 43813664 -51458987 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 6 919 271 61 40 20 chr17 43814549 43814599 -51458052 + (TCCC)n Simple_repeat Simple_repeat 1 51 0 6 919 270 0 0 0 chr17 43814600 43814630 -51458021 + (TTTC)n Simple_repeat Simple_repeat 1 30 0 6 919 690 65 0 0 chr17 43815322 43815414 -51457237 + (TG)n Simple_repeat Simple_repeat 2 93 0 6 919 1652 269 53 23 chr17 43815550 43816081 -51456570 - Lx5 LINE L1 -55 6995 6506 6 919 216 0 0 0 chr17 43816081 43816105 -51456546 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 6 919 1140 78 0 0 chr17 43816107 43816248 -51456403 - B1_Mus2 SINE Alu -6 141 1 6 919 781 134 64 52 chr17 43816248 43816420 -51456231 - B2_Mm2 SINE B2 -19 176 2 6 919 1413 244 76 39 chr17 43816420 43816898 -51455753 - Lx5 LINE L1 -714 6746 6038 6 919 658 260 37 32 chr17 43818059 43818246 -51454405 - ORR1E LTR MaLR -171 188 1 6 919 615 242 43 6 chr17 43818514 43818676 -51453975 + B3A SINE B2 1 168 -30 6 919 3466 18 18 0 chr17 43818780 43819169 -51453482 - MTA_Mm LTR MaLR 0 396 1 6 919 1042 98 807 48 chr17 43819265 43819472 -51453179 - B1_Mus1 SINE Alu -5 143 6 6 919 1039 88 229 6 chr17 43819651 43819834 -51452817 - URR1A DNA MER1_type 0 226 3 6 919 541 307 118 8 chr17 43820141 43820387 -51452264 - B4A SINE B4 -8 284 12 6 919 373 292 114 53 chr17 43820488 43820752 -51451899 - B4 SINE B4 -11 281 2 6 919 213 226 19 0 chr17 43821018 43821071 -51451580 + CT-rich Low_complexity Low_complexity 4 57 0 6 919 369 0 0 0 chr17 43821078 43821119 -51451532 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 919 323 57 0 36 chr17 43821132 43821187 -51451464 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 6 919 717 283 92 39 chr17 43821392 43821727 -51450924 - MLT1A0 LTR MaLR 0 365 13 6 919 349 275 0 52 chr17 43822905 43823020 -51449631 - PB1D10 SINE Alu -7 110 2 6 919 2543 118 12 32 chr17 43823079 43823481 -51449170 + ORR1B1 LTR MaLR 1 394 0 6 919 3022 139 51 8 chr17 43824104 43824613 -51448038 - L1_Mur2 LINE L1 -1400 4477 3947 6 919 507 344 40 40 chr17 43824614 43824865 -51447786 + B4 SINE B4 37 287 -5 6 919 252 183 244 47 chr17 43824960 43825031 -51447620 + PB1 SINE Alu 23 112 -15 6 919 2371 125 3 0 chr17 43825031 43825376 -51447275 - ORR1A1 LTR MaLR 0 346 1 6 919 252 183 244 47 chr17 43825376 43825390 -51447261 + PB1 SINE Alu 113 125 -2 6 919 230 329 25 0 chr17 43825409 43825488 -51447163 + ID4_ SINE ID 3 83 0 6 919 827 255 84 90 chr17 43825686 43826065 -51446586 + MTE2a LTR MaLR 3 379 0 6 919 762 139 13 46 chr17 43826092 43826243 -51446408 - MTD LTR MaLR -14 405 260 6 919 257 312 0 0 chr17 43827047 43827111 -51445540 - ID4_ SINE ID -15 68 5 6 919 309 328 94 0 chr17 43827131 43827259 -51445392 - B1F SINE Alu -9 140 1 6 919 245 377 0 0 chr17 43827312 43827389 -51445262 + ID SINE ID 3 79 -145 6 919 753 188 80 0 chr17 43827422 43827560 -51445091 + B1F2 SINE Alu 1 149 0 6 919 585 250 59 6 chr17 43827653 43827822 -51444829 + ID_B1 SINE B4 1 178 -46 6 919 263 26 0 49 chr17 43827948 43827989 -51444662 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 6 919 744 304 18 57 chr17 43828135 43828417 -51444234 + B4A SINE B4 13 283 -9 6 919 423 38 0 0 chr17 43828418 43828471 -51444180 + (CA)n Simple_repeat Simple_repeat 1 53 0 6 919 234 0 0 0 chr17 43828754 43828780 -51443871 + (TTG)n Simple_repeat Simple_repeat 2 27 0 6 919 362 288 162 30 chr17 43828906 43829170 -51443481 + B4A SINE B4 12 292 0 6 919 244 175 34 34 chr17 43829894 43829953 -51442698 - PB1D10 SINE Alu -1 116 58 6 919 201 154 0 0 chr17 43830166 43830205 -51442446 + (TCTCTG)n Simple_repeat Simple_repeat 4 42 0 6 919 702 0 0 0 chr17 43830206 43830284 -51442367 + (TTC)n Simple_repeat Simple_repeat 3 80 0 6 919 1137 123 0 0 chr17 43830284 43830463 -51442188 + (TCC)n Simple_repeat Simple_repeat 2 180 0 6 919 387 0 0 0 chr17 43830463 43830506 -51442145 + (TC)n Simple_repeat Simple_repeat 2 44 0 6 919 233 262 195 62 chr17 43831184 43831379 -51441272 + MIRb SINE MIR 4 224 -44 6 919 1696 115 195 41 chr17 43831499 43831817 -51440834 - ORR1B2 LTR MaLR 0 367 1 6 919 7131 181 56 14 chr17 43831821 43833265 -51439386 - ORR1B2-int LTR MaLR -4 1505 1 6 919 2115 129 9 6 chr17 43833265 43833600 -51439051 - ORR1B2 LTR MaLR 0 367 32 6 919 570 67 0 0 chr17 43834235 43834310 -51438341 + (TGGA)n Simple_repeat Simple_repeat 3 77 0 6 919 247 262 0 90 chr17 43835211 43835278 -51437373 - PB1D10 SINE Alu -48 69 9 6 919 742 240 17 6 chr17 43835311 43835487 -51437164 + U2 snRNA snRNA 1 178 -10 6 919 400 192 75 75 chr17 43835557 43835664 -51436987 - ID_B1 SINE B4 -12 212 106 6 919 269 307 92 42 chr17 43835664 43835676 -51436975 - B1F2 SINE Alu -12 137 13 6 919 581 289 68 24 chr17 43835710 43835916 -51436735 - B3 SINE B2 0 216 2 6 919 425 68 0 0 chr17 43837370 43837429 -51435222 + B2_Mm1t SINE B2 1 59 -134 6 919 446 269 25 8 chr17 43837651 43837771 -51434880 - B1F2 SINE Alu -19 130 9 6 919 219 370 0 0 chr17 43837719 43837800 -51434851 - B4 SINE B4 -147 145 65 6 919 1086 194 23 19 chr17 43838093 43838308 -51434343 - B3 SINE B2 0 216 1 6 919 441 232 9 80 chr17 43838601 43838747 -51433904 + B4 SINE B4 2 134 -90 6 919 24 77 0 0 chr17 43838761 43838813 -51433838 + AT_rich Low_complexity Low_complexity 1 52 0 6 919 250 374 0 0 chr17 43839189 43839363 -51433288 + (TG)n Simple_repeat Simple_repeat 2 175 0 6 919 733 234 52 17 chr17 43840138 43840312 -51432339 - B3A SINE B2 -18 180 1 6 919 537 311 194 0 chr17 43840375 43840725 -51431926 - L1M4 LINE L1 -5633 909 492 6 919 225 0 0 0 chr17 43841554 43841579 -51431072 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 7 919 483 141 0 0 chr17 43841890 43841982 -51430669 + (TG)n Simple_repeat Simple_repeat 1 92 0 7 919 500 307 50 27 chr17 43842026 43842287 -51430364 - B4A SINE B4 -18 274 8 7 919 1205 110 55 0 chr17 43842445 43842627 -51430024 - B2_Mm2 SINE B2 -1 194 3 7 919 22 56 0 0 chr17 43842769 43842805 -51429846 + AT_rich Low_complexity Low_complexity 1 36 0 7 919 338 193 68 68 chr17 43842817 43842934 -51429717 - PB1D10 SINE Alu 0 117 1 7 919 370 230 176 0 chr17 43843458 43843623 -51429028 - Lx9 LINE L1 -8 7636 7443 7 919 648 261 10 25 chr17 43843749 43843949 -51428702 + B3A SINE B2 2 198 0 7 919 2123 100 24 39 chr17 43845010 43845344 -51427307 - ORR1A4 LTR MaLR 0 329 1 7 919 5605 142 33 25 chr17 43845344 43846673 -51425978 - ORR1A4-int LTR MaLR 0 1792 670 7 919 744 219 163 69 chr17 43846628 43846873 -51425778 - MT2B LTR ERVL -316 285 18 7 919 432 37 0 0 chr17 43846885 43846939 -51425712 + (CA)n Simple_repeat Simple_repeat 2 55 0 7 919 338 57 0 54 chr17 43848042 43848116 -51424535 + (TTGTG)n Simple_repeat Simple_repeat 3 72 0 7 919 368 20 20 0 chr17 43848241 43848290 -51424361 + (TTTTG)n Simple_repeat Simple_repeat 1 50 0 7 919 24 0 0 0 chr17 43848540 43848564 -51424087 + AT_rich Low_complexity Low_complexity 1 24 0 7 919 1422 44 33 0 chr17 43849884 43850067 -51422584 + L1Md_F2 LINE L1 6392 6580 -2 7 919 1079 252 123 19 chr17 43850557 43850873 -51421778 + ORR1D1 LTR MaLR 1 349 -25 7 919 216 179 0 0 chr17 43851114 43851153 -51421498 + CT-rich Low_complexity Low_complexity 4 42 0 7 919 1171 270 60 33 chr17 43851816 43852183 -51420468 - MTEa LTR MaLR 0 379 3 7 919 1193 68 0 0 chr17 43852356 43852504 -51420147 - B1_Mus1 SINE Alu 0 148 1 7 919 301 318 19 32 chr17 43853418 43853574 -51419077 - Charlie2a DNA MER1_type -1232 1629 1476 7 919 256 325 91 57 chr17 43853779 43853988 -51418663 - Charlie2a DNA MER1_type -2562 299 84 7 919 354 308 143 21 chr17 43854280 43854469 -51418182 - MER58A DNA MER1_type 0 224 13 7 919 425 100 25 0 chr17 43854499 43854579 -51418072 + (CAGAGA)n Simple_repeat Simple_repeat 3 84 0 7 919 1344 40 0 0 chr17 43854603 43854778 -51417873 + (TAGA)n Simple_repeat Simple_repeat 2 176 0 7 919 287 113 19 0 chr17 43854801 43854854 -51417797 + (TAGG)n Simple_repeat Simple_repeat 1 54 0 7 919 324 256 13 0 chr17 43855345 43855423 -51417228 - ID4 SINE ID -4 79 1 7 919 232 307 13 0 chr17 43855464 43855539 -51417112 + MER5A DNA MER1_type 7 82 -107 7 919 223 321 42 90 chr17 43856036 43856180 -51416471 - MIR SINE MIR -10 252 116 7 919 2375 179 80 100 chr17 43856363 43857003 -51415648 + RMER20B LTR ERVK 1 627 0 7 919 309 347 54 54 chr17 43857004 43857208 -51415443 - MER21B LTR ERV1 -162 701 498 7 919 8263 48 0 4 chr17 43857262 43858428 -51414223 - L1Md_F2 LINE L1 -12 6570 5410 7 919 693 53 10 10 chr17 43858420 43858516 -51414135 + L1Md_F2 LINE L1 5329 5424 -459 7 919 766 279 106 35 chr17 43858530 43858992 -51413659 - RMER13A LTR ERVK -207 701 175 7 919 510 282 117 31 chr17 43859097 43859353 -51413298 + B4A SINE B4 1 278 -14 7 919 315 0 0 0 chr17 43859371 43859406 -51413245 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 919 200 122 0 39 chr17 43859408 43859459 -51413192 + (CAGAGA)n Simple_repeat Simple_repeat 2 50 0 7 919 360 100 17 0 chr17 43859484 43859544 -51413107 + HAL1-3A_ME LINE L1 1974 2034 -824 7 919 348 155 0 0 chr17 43859576 43859647 -51413004 + (CA)n Simple_repeat Simple_repeat 2 72 0 7 919 549 254 31 0 chr17 43859709 43859839 -51412812 - B1_Mur1 SINE Alu -2 147 14 7 919 1183 314 36 76 chr17 43860644 43860828 -51411823 - L1MA4 LINE L1 -1477 5996 5818 7 919 557 277 130 5 chr17 43860828 43861020 -51411631 - B3 SINE B2 0 216 1 7 919 1183 297 22 58 chr17 43861020 43861435 -51411216 - L1MA4 LINE L1 -448 5852 5446 7 919 408 196 41 10 chr17 43861548 43861646 -51411005 - B3 SINE B2 -6 210 110 7 919 1128 169 159 13 chr17 43861664 43861903 -51410748 - B4A SINE B4 -18 274 1 7 919 1164 43 0 0 chr17 43861919 43862057 -51410594 + B1_Mus2 SINE Alu 2 139 -8 7 919 1058 309 116 16 chr17 43862683 43863417 -51409234 - L1MA8 LINE L1 0 6300 5494 7 919 870 127 7 0 chr17 43863429 43863579 -51409072 - Lx LINE L1 0 6654 6504 7 919 384 297 9 0 chr17 43863581 43863692 -51408959 - B3A SINE B2 -84 114 3 7 919 1741 271 90 26 chr17 43863693 43864458 -51408193 - L1MA8 LINE L1 -774 5369 4556 7 919 288 248 151 63 chr17 43864675 43864834 -51407817 - Lx8 LINE L1 -2 7471 7299 7 919 454 233 132 0 chr17 43864847 43864976 -51407675 - Lx8 LINE L1 -225 7248 7103 7 919 1331 245 23 20 chr17 43864976 43865337 -51407314 + RMER20B LTR ERVK 10 365 -262 7 919 4191 7 0 0 chr17 43865337 43865794 -51406857 + L1Md_T LINE L1 6126 6582 0 7 919 1223 268 60 48 chr17 43865794 43865933 -51406718 + RMER20B LTR ERVK 365 516 0 7 919 2233 109 0 21 chr17 43866025 43866361 -51406290 - ORR1A4 LTR MaLR 0 329 1 7 919 1164 75 0 0 chr17 43866993 43867140 -51405511 + B1_Mus2 SINE Alu 1 147 0 7 919 273 355 36 0 chr17 43867194 43867304 -51405347 - RMER12 LTR ERVK -474 848 735 7 919 198 258 0 0 chr17 43867599 43867661 -51404990 + (CA)n Simple_repeat Simple_repeat 1 62 0 7 919 235 224 0 20 chr17 43867716 43867766 -51404885 + GA-rich Low_complexity Low_complexity 6 54 0 7 919 21 0 0 0 chr17 43868035 43868056 -51404595 + AT_rich Low_complexity Low_complexity 1 21 0 7 919 583 296 56 0 chr17 43869280 43869459 -51403192 - B4 SINE B4 -2 290 102 7 919 668 247 39 28 chr17 43869672 43869851 -51402800 - B3A SINE B2 -17 181 1 7 919 854 214 140 5 chr17 43870679 43870900 -51401751 + MTD LTR MaLR 127 377 -42 7 919 445 298 92 0 chr17 43872123 43872264 -51400387 + B3A SINE B2 2 155 -43 7 919 348 24 0 0 chr17 43872295 43872336 -51400315 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 919 23 54 0 0 chr17 43872509 43872546 -51400105 + AT_rich Low_complexity Low_complexity 1 37 0 7 919 895 98 24 6 chr17 43872706 43872870 -51399781 + (TCTCC)n Simple_repeat Simple_repeat 4 170 0 7 919 277 283 13 159 chr17 43873039 43873190 -51399461 + RSINE1 SINE B4 35 163 -2 7 919 22 0 0 0 chr17 43873502 43873524 -51399127 + AT_rich Low_complexity Low_complexity 1 22 0 7 919 1465 195 37 29 chr17 43874409 43874824 -51397827 - RMER19A LTR ERVK -82 655 188 7 919 1435 186 89 22 chr17 43874826 43875105 -51397546 - RMER4A LTR ERVK -119 347 45 7 919 1100 96 0 0 chr17 43875105 43875251 -51397400 + B1_Mus1 SINE Alu 1 146 -2 7 919 1435 186 89 22 chr17 43875251 43875295 -51397356 - RMER4A LTR ERVK -422 44 2 7 919 2222 124 86 25 chr17 43875296 43875692 -51396959 - MurERV4-int LTR ERVK 0 5260 4841 7 919 297 266 10 23 chr17 43875693 43875807 -51396844 - Lx4B LINE L1 -7 7051 6889 7 919 4377 134 10 1 chr17 43875823 43876550 -51396101 + Lx4A LINE L1 5205 5938 -1120 7 919 6803 138 11 28 chr17 43876550 43877718 -51394933 - MurERV4-int LTR ERVK -735 4525 3378 7 919 2714 148 64 27 chr17 43877720 43878201 -51394450 - RLTR19 LTR ERVK 0 499 1 7 919 572 160 21 0 chr17 43878250 43878344 -51394307 - RLTR19-int LTR ERVK -1287 4850 4755 7 919 7164 165 48 22 chr17 43878356 43879788 -51392863 - MurERV4-int LTR ERVK -2405 2855 1300 7 919 1648 152 49 58 chr17 43879783 43880111 -51392540 - MurERV4-int LTR ERVK -4935 325 1 7 919 378 154 13 0 chr17 43880111 43880189 -51392462 - RMER4A LTR ERVK 0 466 388 7 919 284 249 87 33 chr17 43880214 43880358 -51392293 + L1MC LINE L1 3571 3721 -2425 7 919 725 217 114 21 chr17 43880373 43880566 -51392085 + B3 SINE B2 5 215 -1 7 919 565 227 0 32 chr17 43880648 43880771 -51391880 + PB1D9 SINE Alu 2 120 0 7 919 449 110 0 14 chr17 43880771 43880845 -51391806 + (GAAA)n Simple_repeat Simple_repeat 4 76 0 7 919 271 239 0 0 chr17 43880889 43880956 -51391695 - B3A SINE B2 -130 68 2 7 919 189 0 0 0 chr17 43881693 43881714 -51390937 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 7 919 225 307 32 54 chr17 43881730 43881749 -51390902 + B4 SINE B4 65 81 -211 7 919 278 245 57 32 chr17 43881749 43881855 -51390796 + PB1D7 SINE Alu 1 120 -29 7 919 185 132 0 26 chr17 43881865 43881904 -51390747 + (CAA)n Simple_repeat Simple_repeat 2 39 0 7 919 255 161 0 0 chr17 43882851 43882907 -51389744 + A-rich Low_complexity Low_complexity 1 56 0 7 919 224 276 0 0 chr17 43883205 43883263 -51389388 + (CA)n Simple_repeat Simple_repeat 1 58 0 7 919 364 305 42 21 chr17 43883870 43884014 -51388637 - MER5A DNA MER1_type -29 160 14 7 919 483 219 26 9 chr17 43884410 43884525 -51388126 - Lx8 LINE L1 -132 7341 7225 7 919 810 136 18 6 chr17 43884526 43884686 -51387965 + B2_Mm2 SINE B2 2 170 -46 7 919 387 0 0 0 chr17 43884687 43884730 -51387921 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 7 919 419 244 201 17 chr17 43884765 43884997 -51387654 - Lx8 LINE L1 -495 7201 6937 7 919 426 279 93 0 chr17 43885147 43885275 -51387376 + B3A SINE B2 1 140 -58 7 919 1433 189 0 18 chr17 43885275 43885560 -51387091 - RLTR15 LTR ERVK 0 359 80 7 919 1230 257 45 14 chr17 43885875 43886234 -51386417 - ORR1D2 LTR MaLR 0 370 1 7 919 458 237 34 42 chr17 43887632 43887751 -51384900 + Lx6 LINE L1 7264 7381 -79 7 919 3051 41 0 3 chr17 43888563 43888929 -51383722 - L1_Mus1 LINE L1 -2 6565 6201 7 919 294 253 99 0 chr17 43888956 43889047 -51383604 - LTR16E1 LTR ERVL -1 537 438 7 919 565 284 33 24 chr17 43889913 43890126 -51382525 + MER57A-int LTR ERV1 214 428 -5759 7 919 1255 206 209 3 chr17 43890268 43890570 -51382081 - ORR1D2 LTR MaLR -3 367 4 7 919 24 96 0 0 chr17 43890598 43890671 -51381980 + AT_rich Low_complexity Low_complexity 1 73 0 7 919 579 186 102 0 chr17 43890703 43890821 -51381830 - B3 SINE B2 -86 130 1 7 919 368 333 7 14 chr17 43891040 43891183 -51381468 - ID_B1 SINE B4 -13 211 70 7 919 355 94 31 15 chr17 43891543 43891608 -51381043 + (TTCC)n Simple_repeat Simple_repeat 1 66 0 7 919 536 84 12 0 chr17 43892104 43892187 -51380464 + (TC)n Simple_repeat Simple_repeat 1 84 0 7 919 470 248 0 6 chr17 43892443 43892601 -51380050 + (TATATG)n Simple_repeat Simple_repeat 5 161 0 7 919 501 253 0 0 chr17 43892672 43893018 -51379633 + (TATATG)n Simple_repeat Simple_repeat 1 346 0 7 919 538 318 36 28 chr17 43893205 43893457 -51379194 + MLT1J2 LTR MaLR 65 318 -130 8 919 812 178 101 21 chr17 43893694 43893883 -51378768 + B3 SINE B2 2 205 -11 8 919 299 184 77 26 chr17 43893899 43893977 -51378674 + RLTR25B LTR ERVK 428 509 -519 8 919 791 57 0 0 chr17 43893915 43894020 -51378631 + B1_Mus2 SINE Alu 43 147 0 8 919 261 83 0 0 chr17 43894020 43894056 -51378595 + (A)n Simple_repeat Simple_repeat 1 36 0 8 919 705 293 62 4 chr17 43895044 43895284 -51377367 + MTEa LTR MaLR 4 257 -122 8 919 278 233 0 0 chr17 43895297 43895357 -51377294 + MTEa LTR MaLR 320 379 0 8 919 1388 188 101 24 chr17 43895601 43895939 -51376712 + ORR1D2 LTR MaLR 5 368 -2 8 919 7476 213 89 42 chr17 43896126 43896391 -51376260 - Lx7 LINE L1 0 7696 7448 8 919 236 0 88 0 chr17 43896391 43896425 -51376226 + (CATAT)n Simple_repeat Simple_repeat 4 40 0 8 919 7476 213 89 42 chr17 43896425 43897222 -51375429 - Lx7 LINE L1 -249 7447 6586 8 919 1981 118 136 0 chr17 43897222 43897545 -51375106 + ORR1B2 LTR MaLR 1 367 0 8 919 7476 185 76 40 chr17 43897545 43898543 -51374108 - Lx7 LINE L1 -1111 6585 5534 8 919 1773 115 78 0 chr17 43898550 43898845 -51373806 + ORR1A3 LTR MaLR 1 318 -8 8 919 2733 138 114 6 chr17 43898849 43899375 -51373276 - Lx7 LINE L1 -356 5524 4942 8 919 304 340 0 32 chr17 43899378 43899536 -51373115 + CT-rich Low_complexity Low_complexity 6 158 0 8 919 283 265 60 87 chr17 43900043 43900192 -51372459 - RLTR40 LTR ERVK -621 196 52 8 919 1139 71 14 19 chr17 43900943 43901158 -51371493 + (TCTA)n Simple_repeat Simple_repeat 1 214 0 8 919 808 252 160 16 chr17 43901188 43901494 -51371157 - ORR1E LTR MaLR -2 357 8 8 919 679 277 55 62 chr17 43901758 43902031 -51370620 + B4 SINE B4 4 274 -18 8 919 267 104 0 0 chr17 43902137 43902185 -51370466 + (TGAA)n Simple_repeat Simple_repeat 1 48 0 8 919 213 303 13 0 chr17 43903087 43903163 -51369488 - PB1D10 SINE Alu -20 97 21 8 919 3627 81 4 6 chr17 43903216 43903701 -51368950 + Lx2 LINE L1 6368 6851 -146 8 919 445 215 62 52 chr17 43904010 43904178 -51368473 - ORR1E LTR MaLR -5 365 186 8 919 441 0 0 0 chr17 43904178 43904227 -51368424 + (GA)n Simple_repeat Simple_repeat 1 49 0 8 919 432 0 0 0 chr17 43904251 43904299 -51368352 + (TG)n Simple_repeat Simple_repeat 2 49 0 8 919 1989 84 15 61 chr17 43904301 43904630 -51368021 + ORR1A4 LTR MaLR 9 322 -7 8 919 554 248 0 34 chr17 43904620 43904766 -51367885 - ORR1E LTR MaLR -215 144 4 8 919 239 224 43 11 chr17 43904831 43904915 -51367736 + MIR SINE MIR 59 139 -129 8 919 478 277 80 0 chr17 43906356 43906493 -51366158 + B1_Mur1 SINE Alu 2 149 0 8 919 387 141 0 0 chr17 43906645 43906709 -51365942 + (TCCC)n Simple_repeat Simple_repeat 2 65 0 8 919 238 267 61 91 chr17 43906996 43907128 -51365523 + B4 SINE B4 2 130 -35 8 919 201 94 0 0 chr17 43907199 43907231 -51365420 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 919 745 305 22 22 chr17 43907324 43907592 -51365059 - MT2A LTR ERVL -101 432 165 8 114 258 304 71 9 chr17 43909020 43909133 -51363518 + ORR1E LTR MaLR 1 120 -239 8 920 258 299 0 0 chr17 43909618 43909685 -51362966 + (TG)n Simple_repeat Simple_repeat 2 68 0 8 920 333 68 0 0 chr17 43909715 43909759 -51362892 + (TATG)n Simple_repeat Simple_repeat 2 45 0 8 920 944 234 19 0 chr17 43910062 43910267 -51362384 + ID_B1 SINE B4 12 220 -4 8 920 233 238 62 0 chr17 43910337 43910417 -51362234 + (CATG)n Simple_repeat Simple_repeat 3 87 0 8 920 1438 77 0 5 chr17 43910634 43910818 -51361833 + B2_Mm2 SINE B2 1 183 -12 8 920 1953 150 73 27 chr17 43910818 43911189 -51361462 + Lx9 LINE L1 7063 7450 -194 8 920 498 33 0 0 chr17 43911575 43911635 -51361016 + (TG)n Simple_repeat Simple_repeat 2 61 0 8 920 294 187 23 61 chr17 43911736 43911867 -51360784 + (TATAA)n Simple_repeat Simple_repeat 5 130 0 8 920 766 256 20 20 chr17 43911919 43912122 -51360529 - B3 SINE B2 -9 207 5 8 920 246 292 14 0 chr17 43912399 43912471 -51360180 - ID4_ SINE ID -9 74 2 8 920 775 123 23 34 chr17 43913198 43913375 -51359276 + GA-rich Low_complexity Low_complexity 1 175 0 8 920 371 92 92 0 chr17 43913387 43913474 -51359177 + (CAGAGA)n Simple_repeat Simple_repeat 2 96 0 8 920 395 204 22 11 chr17 43913859 43913948 -51358703 + 4.5SRNA scRNA scRNA 1 90 -4 8 920 648 324 23 11 chr17 43913948 43914123 -51358528 + B3A SINE B2 1 177 -21 8 920 407 256 142 115 chr17 43914243 43914539 -51358112 + MLT1A LTR MaLR 71 374 0 8 920 1088 274 72 76 chr17 43915578 43916056 -51356595 - L1MA5 LINE L1 -353 7009 6534 8 920 301 165 12 12 chr17 43916056 43916136 -51356515 - Lx4A LINE L1 0 7058 6979 8 920 1088 278 134 37 chr17 43916136 43916685 -51355966 - L1MA5 LINE L1 -829 6533 5921 8 920 432 0 0 0 chr17 43916685 43916733 -51355918 + (CA)n Simple_repeat Simple_repeat 2 49 0 8 920 227 258 167 0 chr17 43916733 43916799 -51355852 - MTD LTR MaLR -232 187 111 8 920 273 305 153 0 chr17 43916856 43916987 -51355664 + Lx8 LINE L1 7321 7471 -2 8 920 236 274 36 104 chr17 43917005 43917225 -51355426 - L1MA5 LINE L1 -1290 5915 5711 8 920 411 317 102 5 chr17 43917288 43917494 -51355157 - L1MA5 LINE L1 -4224 2985 2760 8 920 666 283 118 14 chr17 43917608 43917845 -51354806 - Lx8 LINE L1 -5 7468 7202 8 920 1214 41 0 39 chr17 43917845 43917859 -51354792 - B1_Mus2 SINE Alu 0 147 139 8 920 201 74 0 0 chr17 43917859 43917886 -51354765 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 8 920 1214 41 0 39 chr17 43917886 43918024 -51354627 - B1_Mus2 SINE Alu -9 138 1 8 920 666 283 118 14 chr17 43918024 43918073 -51354578 - Lx8 LINE L1 -272 7201 7153 8 920 873 218 5 57 chr17 43918290 43918308 -51354343 - B3A SINE B2 0 198 182 8 920 231 36 0 0 chr17 43918308 43918336 -51354315 + (TC)n Simple_repeat Simple_repeat 1 28 0 8 920 873 218 5 57 chr17 43918336 43918526 -51354125 - B3A SINE B2 -17 181 1 8 920 248 222 45 116 chr17 43918553 43918665 -51353986 - L1MA5 LINE L1 -5107 2102 1999 8 920 2041 138 3 58 chr17 43919138 43919484 -51353167 - ORR1A2 LTR MaLR 0 327 1 8 920 576 305 151 8 chr17 43920312 43920376 -51352275 - B4A SINE B4 -4 288 225 8 920 477 0 0 0 chr17 43920376 43920429 -51352222 + (TTTTA)n Simple_repeat Simple_repeat 4 56 0 8 920 576 305 151 8 chr17 43920429 43920615 -51352036 - B4A SINE B4 -68 224 4 8 920 268 270 20 74 chr17 43920696 43920844 -51351807 - L1MA5 LINE L1 -7068 141 2 8 920 601 153 36 0 chr17 43921199 43921488 -51351163 + (TG)n Simple_repeat Simple_repeat 1 299 0 8 920 328 295 31 8 chr17 43921663 43921793 -51350858 - L3 LINE CR1 -606 3883 3751 8 920 21 0 0 0 chr17 43921882 43921903 -51350748 + AT_rich Low_complexity Low_complexity 1 21 0 8 920 190 377 15 23 chr17 43922792 43922925 -51349726 + MIRc SINE MIR 36 167 -101 8 920 549 54 32 21 chr17 43922941 43923035 -51349616 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 8 920 344 301 9 72 chr17 43923689 43923800 -51348851 + RSINE1 SINE B4 8 111 -54 8 920 658 252 0 0 chr17 43923795 43923926 -51348725 + RSINE1 SINE B4 11 141 -24 8 920 22 80 0 0 chr17 43923948 43923998 -51348653 + AT_rich Low_complexity Low_complexity 1 50 0 8 920 640 270 97 6 chr17 43923999 43924174 -51348477 + B3 SINE B2 1 191 -25 8 920 752 138 46 8 chr17 43924176 43924307 -51348344 + B1_Mus2 SINE Alu 6 141 -6 8 920 297 0 0 0 chr17 43924308 43924341 -51348310 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 8 920 726 117 0 0 chr17 43924392 43924503 -51348148 + (CCA)n Simple_repeat Simple_repeat 3 113 0 8 920 238 158 138 17 chr17 43925511 43925569 -51347082 + Lx8 LINE L1 7407 7471 -2 8 920 238 231 30 15 chr17 43925622 43925688 -51346963 - L1MC4a LINE L1 -179 7703 7637 8 920 606 252 36 0 chr17 43925746 43925885 -51346766 + RSINE1 SINE B4 4 147 -18 8 920 360 0 0 0 chr17 43925892 43925932 -51346719 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 920 256 313 35 24 chr17 43926077 43926162 -51346489 - ID_B1 SINE B4 -52 172 87 8 920 860 161 0 33 chr17 43927188 43927499 -51345152 + CT-rich Low_complexity Low_complexity 1 300 0 8 920 714 287 118 16 chr17 43927537 43927792 -51344859 - B4A SINE B4 -8 284 4 8 920 450 53 0 0 chr17 43928578 43928635 -51344016 + (TC)n Simple_repeat Simple_repeat 2 58 0 8 920 211 130 18 18 chr17 43928634 43928689 -51343962 + (TG)n Simple_repeat Simple_repeat 2 56 0 8 920 546 259 7 7 chr17 43928855 43928999 -51343652 - MamRep1161 DNA TcMar -813 144 1 8 920 191 239 0 15 chr17 43929238 43929306 -51343345 + (TATG)n Simple_repeat Simple_repeat 4 70 0 8 920 778 265 53 110 chr17 43929343 43929567 -51343084 - B4 SINE B4 0 292 81 8 920 2857 87 29 12 chr17 43929567 43929987 -51342664 - L1_Mus3 LINE L1 -7 6631 6205 8 920 778 265 53 110 chr17 43929987 43930063 -51342588 - B4 SINE B4 -212 80 9 8 920 212 277 145 0 chr17 43930443 43930526 -51342125 + MIR SINE MIR 32 126 -136 8 920 459 330 16 38 chr17 43930858 43931044 -51341607 + B3A SINE B2 1 182 -16 8 920 773 221 67 62 chr17 43931494 43931702 -51340949 + B3A SINE B2 5 213 -3 8 920 690 182 25 4 chr17 43932230 43932475 -51340176 + GA-rich Low_complexity Low_complexity 1 250 0 8 920 237 108 0 0 chr17 43932479 43932516 -51340135 + (CAGGG)n Simple_repeat Simple_repeat 5 41 0 8 920 402 351 48 36 chr17 43932625 43932876 -51339775 + MER90 LTR ERV1 273 526 -49 8 920 605 286 137 31 chr17 43932882 43933138 -51339513 - MTD LTR MaLR -1 418 136 8 920 480 295 98 48 chr17 43934019 43934354 -51338297 - L1M2 LINE L1 -2261 3882 3531 8 920 939 286 33 27 chr17 43934402 43934768 -51337883 + L1MB7 LINE L1 5817 6184 0 8 920 369 0 0 0 chr17 43935062 43935103 -51337548 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 920 235 234 0 30 chr17 43935165 43935231 -51337420 + CT-rich Low_complexity Low_complexity 4 67 0 8 920 2059 158 162 21 chr17 43935331 43935757 -51336894 + Lx4B LINE L1 6571 7056 -2 8 920 393 330 0 0 chr17 43935788 43935888 -51336763 - RSINE1 SINE B4 -63 102 3 8 920 187 278 54 22 chr17 43935921 43936013 -51336638 + MIR SINE MIR 155 249 -13 8 920 379 269 221 13 chr17 43936467 43936693 -51335958 + B4 SINE B4 8 280 -12 8 920 251 371 30 40 chr17 43936894 43937096 -51335555 + L3 LINE CR1 4099 4298 -191 8 920 182 119 48 0 chr17 43937269 43937311 -51335340 + (CAGA)n Simple_repeat Simple_repeat 1 44 0 8 920 507 56 0 0 chr17 43937340 43937411 -51335240 + (GA)n Simple_repeat Simple_repeat 1 71 0 9 920 208 188 0 61 chr17 43937424 43937571 -51335080 + (CAGAGA)n Simple_repeat Simple_repeat 6 143 0 9 920 213 71 0 0 chr17 43937571 43937599 -51335052 + (GGGA)n Simple_repeat Simple_repeat 2 29 0 9 920 440 111 14 0 chr17 43937599 43937671 -51334980 + (GAGAA)n Simple_repeat Simple_repeat 3 75 0 9 920 186 133 0 0 chr17 43939745 43939775 -51332876 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 9 920 294 161 30 61 chr17 43940708 43940774 -51331877 - MIRm SINE MIR -10 266 203 9 920 234 321 146 51 chr17 43940774 43941003 -51331648 - L2b LINE L2 -12 3363 3041 9 920 308 236 11 0 chr17 43942074 43942163 -51330488 + (TG)n Simple_repeat Simple_repeat 1 90 0 9 920 454 226 124 59 chr17 43942163 43942332 -51330319 - B3A SINE B2 -16 182 3 9 920 712 231 43 5 chr17 43942827 43943014 -51329637 - B4 SINE B4 0 292 99 9 920 232 268 58 11 chr17 43943774 43943790 -51328861 + MIRc SINE MIR 7 23 -245 9 920 279 0 0 0 chr17 43943790 43943821 -51328830 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 9 920 232 268 58 11 chr17 43943821 43943891 -51328760 + MIRc SINE MIR 24 96 -172 9 920 1077 192 14 19 chr17 43944299 43944506 -51328145 + B3 SINE B2 5 210 -6 9 920 468 0 0 0 chr17 43944580 43944632 -51328019 + (CA)n Simple_repeat Simple_repeat 2 53 0 9 920 351 0 0 0 chr17 43945231 43945270 -51327381 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 920 621 314 85 23 chr17 43945321 43945579 -51327072 - B4A SINE B4 -18 274 1 9 920 2137 88 6 3 chr17 43945629 43945947 -51326704 - ORR1A2 LTR MaLR -8 319 1 9 920 509 239 42 126 chr17 43946042 43946257 -51326394 - B3A SINE B2 -1 197 1 9 920 234 91 0 0 chr17 43946282 43946315 -51326336 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 920 633 344 0 39 chr17 43946409 43946431 -51326220 - B4A SINE B4 -5 287 266 9 920 270 0 0 0 chr17 43946431 43946461 -51326190 + (CA)n Simple_repeat Simple_repeat 2 31 0 9 920 633 344 0 39 chr17 43946461 43946641 -51326010 - B4A SINE B4 -27 265 93 9 920 596 259 7 0 chr17 43947331 43947470 -51325181 - RSINE1 SINE B4 -22 143 4 9 920 353 75 0 19 chr17 43949640 43949694 -51322957 + (GGA)n Simple_repeat Simple_repeat 2 54 0 9 920 1645 252 20 62 chr17 43949820 43950268 -51322383 - Lx5 LINE L1 0 7050 6622 9 920 1758 103 30 58 chr17 43950487 43950817 -51321834 - ORR1A4 LTR MaLR -8 321 1 9 920 276 336 25 17 chr17 43950854 43950972 -51321679 - B4A SINE B4 -166 126 8 9 920 784 218 34 6 chr17 43952050 43952225 -51320426 + B3A SINE B2 1 180 -18 9 920 1105 162 88 0 chr17 43953900 43954104 -51318547 - URR1A DNA MER1_type 0 226 5 9 920 226 336 23 62 chr17 43954593 43954723 -51317928 + B4A SINE B4 17 141 -151 9 920 427 329 0 0 chr17 43954724 43954894 -51317757 + G-rich Low_complexity Low_complexity 1 170 0 9 920 685 247 10 45 chr17 43955404 43955603 -51317048 + B3A SINE B2 1 192 -6 9 920 235 287 11 0 chr17 43955965 43956052 -51316599 + (TATG)n Simple_repeat Simple_repeat 4 91 0 9 920 239 304 89 0 chr17 43956067 43956146 -51316505 - B4A SINE B4 -18 274 189 9 920 209 180 20 0 chr17 43956219 43956269 -51316382 + CT-rich Low_complexity Low_complexity 5 55 0 9 920 240 35 0 0 chr17 43956288 43956317 -51316334 + (TCCC)n Simple_repeat Simple_repeat 4 32 0 9 920 413 316 76 19 chr17 43956352 43956510 -51316141 - MER21B LTR ERV1 -569 294 128 9 920 1014 196 19 34 chr17 43957448 43957654 -51314997 + B3 SINE B2 4 206 -10 9 920 988 89 0 155 chr17 43958245 43958458 -51314193 + B2_Mm2 SINE B2 1 180 -15 9 920 215 222 321 9 chr17 43958887 43959004 -51313647 - MIRb SINE MIR -33 235 84 9 920 295 276 31 4 chr17 43960193 43960296 -51312355 + PB1D10 SINE Alu 6 112 -8 9 920 256 244 92 54 chr17 43960360 43960375 -51312276 + CYRA11_Mm Unknown Y-chromosome 160 294 -323 9 920 706 96 70 0 chr17 43960375 43960490 -51312161 - URR1B DNA MER1_type 0 225 103 9 920 1333 166 82 7 chr17 43960527 43960819 -51311832 + Lx9 LINE L1 7331 7644 0 9 920 226 169 72 82 chr17 43961023 43961120 -51311531 + Lx9 LINE L1 7419 7514 -130 9 920 242 29 29 0 chr17 43961141 43961176 -51311475 + (TC)n Simple_repeat Simple_repeat 1 36 0 9 920 225 0 0 0 chr17 43961178 43961203 -51311448 + (TA)n Simple_repeat Simple_repeat 2 26 0 9 920 279 287 7 59 chr17 43961339 43961491 -51311160 + Lx8 LINE L1 7330 7473 0 9 920 4392 176 74 5 chr17 43961808 43962325 -51310326 - RMER17B LTR ERVK 0 958 436 9 920 261 0 0 0 chr17 43962325 43962354 -51310297 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 9 920 536 42 14 0 chr17 43962355 43962426 -51310225 + (GGAGA)n Simple_repeat Simple_repeat 1 72 0 9 920 4392 176 74 5 chr17 43962426 43962802 -51309849 - RMER17B LTR ERVK -523 435 5 9 920 22 35 0 0 chr17 43963806 43963835 -51308816 + AT_rich Low_complexity Low_complexity 1 29 0 9 920 207 100 0 0 chr17 43963922 43963952 -51308699 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 9 920 624 234 34 34 chr17 43964491 43964637 -51308014 - B1F SINE Alu -1 148 3 9 920 272 27 27 0 chr17 43964690 43964727 -51307924 + (TC)n Simple_repeat Simple_repeat 1 38 0 9 920 512 346 0 6 chr17 43965262 43965442 -51307209 - B3A SINE B2 -18 180 2 9 920 25 0 0 0 chr17 43966234 43966259 -51306392 + AT_rich Low_complexity Low_complexity 1 25 0 9 920 293 286 24 0 chr17 43966806 43966890 -51305761 + L1M5 LINE L1 5743 5828 -296 9 920 519 267 7 62 chr17 43966900 43967044 -51305607 + ID_B1 SINE B4 88 223 -1 9 920 251 376 47 16 chr17 43967162 43967289 -51305362 + B4A SINE B4 11 141 -151 9 920 247 309 107 0 chr17 43967302 43967386 -51305265 + B4 SINE B4 197 289 -3 9 920 273 29 0 0 chr17 43967463 43967497 -51305154 + (TCTG)n Simple_repeat Simple_repeat 2 35 0 9 920 294 73 0 0 chr17 43967520 43967561 -51305090 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 9 920 518 0 16 0 chr17 43967562 43967624 -51305027 + (GA)n Simple_repeat Simple_repeat 2 64 0 9 920 215 31 0 30 chr17 43969225 43969258 -51303393 + (TCCCC)n Simple_repeat Simple_repeat 4 35 0 9 920 225 328 55 70 chr17 43969264 43969392 -51303259 - RSINE1 SINE B4 -36 129 4 9 920 595 277 7 13 chr17 43971084 43971234 -51301417 - RSINE1 SINE B4 -14 151 3 9 920 2348 72 0 12 chr17 43971311 43971634 -51301017 - ORR1A2 LTR MaLR -8 319 1 9 920 211 222 15 60 chr17 43972459 43972526 -51300125 + MIR SINE MIR 139 202 -60 9 920 597 322 23 27 chr17 43972526 43972746 -51299905 + B4A SINE B4 1 219 -73 9 920 217 20 100 0 chr17 43972753 43972803 -51299848 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 9 920 1117 42 13 40 chr17 43972935 43973085 -51299566 - B1_Mm SINE Alu 0 147 2 9 920 799 256 86 8 chr17 43974868 43975124 -51297527 - RMER15 LTR ERVL -19 556 281 9 920 549 30 0 0 chr17 43975666 43975733 -51296918 + (TA)n Simple_repeat Simple_repeat 2 68 0 9 920 518 239 44 0 chr17 43975733 43975846 -51296805 - RSINE1 SINE B4 -37 128 11 9 920 247 290 85 11 chr17 43975989 43976083 -51296568 + ORR1E LTR MaLR 9 109 -250 9 920 371 273 70 139 chr17 43976328 43976515 -51296136 - B3A SINE B2 -2 193 20 9 920 587 239 103 43 chr17 43978691 43978875 -51293776 - B3A SINE B2 -3 195 1 9 920 390 217 11 0 chr17 43979492 43979584 -51293067 + B3A SINE B2 3 95 -103 9 920 496 246 11 61 chr17 43979585 43979732 -51292919 + RLTR18B LTR ERVK 1 150 -362 9 920 302 275 147 48 chr17 43979747 43979917 -51292734 - L1M3e LINE L1 -5701 1329 1230 9 920 32 0 0 0 chr17 43980193 43980225 -51292426 + AT_rich Low_complexity Low_complexity 1 32 0 9 920 356 270 0 0 chr17 43981845 43981919 -51290732 + PB1D7 SINE Alu 37 110 -10 9 920 422 308 0 65 chr17 43982046 43982185 -51290466 - RSINE1 SINE B4 -4 161 32 9 920 376 272 77 55 chr17 43982185 43982580 -51290071 + RLTR15 LTR ERVK 1 350 -9 9 920 396 0 0 0 chr17 43982888 43982932 -51289719 + (TA)n Simple_repeat Simple_repeat 2 45 0 9 920 431 284 104 126 chr17 43982959 43983237 -51289414 + B4A SINE B4 1 272 -20 9 920 643 228 161 11 chr17 43983630 43983816 -51288835 - B3 SINE B2 0 216 3 9 920 315 294 109 27 chr17 43983828 43983975 -51288676 + L4 LINE RTE 1688 1846 -183 9 920 525 310 105 34 chr17 43984667 43984934 -51287717 + B4A SINE B4 1 286 -6 9 920 185 211 19 0 chr17 43984946 43984998 -51287653 + (CA)n Simple_repeat Simple_repeat 2 54 0 9 920 1396 202 126 5 chr17 43985277 43985315 -51287336 - MTD LTR MaLR 0 419 383 9 920 2052 123 67 14 chr17 43985315 43985660 -51286991 + ORR1B2 LTR MaLR 5 367 0 9 920 1396 202 126 5 chr17 43985660 43985995 -51286656 - MTD LTR MaLR -37 382 2 9 920 189 0 0 0 chr17 43986205 43986226 -51286425 + (CAA)n Simple_repeat Simple_repeat 1 21 0 9 920 354 281 118 63 chr17 43986633 43986887 -51285764 - RMER15 LTR ERVL -13 562 295 9 920 1162 107 0 0 chr17 43986996 43987165 -51285486 + MT2B LTR ERVL 1 169 -432 9 920 15706 86 4 3 chr17 43987165 43990062 -51282589 + L1_Mus2 LINE L1 3666 6566 0 9 920 1308 79 0 0 chr17 43990072 43990250 -51282401 + (GGAGA)n Simple_repeat Simple_repeat 3 180 0 9 920 888 129 0 0 chr17 43990263 43990395 -51282256 + MT2B LTR ERVL 154 285 -316 9 920 1049 107 6 12 chr17 43990393 43990564 -51282087 + MT2B LTR ERVL 415 584 0 9 920 269 51 0 25 chr17 43990776 43990816 -51281835 + (TTCC)n Simple_repeat Simple_repeat 3 41 0 9 920 869 154 14 7 chr17 43990816 43990960 -51281691 - B1_Mur4 SINE Alu -5 145 1 9 920 623 262 42 83 chr17 43990960 43991304 -51281347 + MTE2b LTR MaLR 2 312 -107 9 920 553 223 63 27 chr17 43992531 43992727 -51279924 + B3A SINE B2 29 210 -6 9 920 498 243 84 128 chr17 43993391 43993594 -51279057 - B3A SINE B2 0 198 5 1 920 180 158 0 0 chr17 43993854 43993892 -51278759 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 920 495 0 0 0 chr17 43993894 43993949 -51278702 + (GA)n Simple_repeat Simple_repeat 1 55 0 1 920 454 315 133 21 chr17 43993990 43994230 -51278421 + RMER5 LTR ERV1 140 406 -128 1 920 248 354 38 38 chr17 43994697 43994882 -51277769 - B4A SINE B4 -107 185 1 1 920 411 56 0 0 chr17 43994982 43995036 -51277615 + (GGGA)n Simple_repeat Simple_repeat 3 56 0 1 920 261 0 0 0 chr17 43995036 43995065 -51277586 + (CAGAGA)n Simple_repeat Simple_repeat 1 29 0 1 920 531 288 6 64 chr17 43995067 43995223 -51277428 - RSINE1 SINE B4 -16 149 3 1 920 264 301 63 31 chr17 43995573 43995700 -51276951 - MER20 DNA MER1_type -52 167 37 1 920 730 281 10 10 chr17 43996405 43996603 -51276048 - B4 SINE B4 0 292 95 1 920 363 296 18 9 chr17 43997122 43997231 -51275420 + B4A SINE B4 99 208 -84 1 920 513 0 0 0 chr17 43997234 43997291 -51275360 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 920 525 32 0 0 chr17 43997498 43997561 -51275090 + (TATG)n Simple_repeat Simple_repeat 2 64 0 1 920 383 103 0 0 chr17 43997564 43997622 -51275029 + (TTCC)n Simple_repeat Simple_repeat 4 61 0 1 920 816 159 17 0 chr17 43997627 43997803 -51274848 + CT-rich Low_complexity Low_complexity 2 180 0 1 920 207 100 0 0 chr17 43997801 43997831 -51274820 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 1 920 33 25 0 0 chr17 43998574 43998614 -51274037 + AT_rich Low_complexity Low_complexity 1 40 0 1 920 30 0 0 0 chr17 43998981 43999011 -51273640 + AT_rich Low_complexity Low_complexity 1 30 0 1 920 1801 249 61 14 chr17 43999012 43999455 -51273196 - Lx6 LINE L1 -27 7433 6970 1 920 566 158 32 0 chr17 43999456 43999551 -51273100 + B3 SINE B2 2 99 -117 1 920 22 0 0 0 chr17 43999554 43999576 -51273075 + AT_rich Low_complexity Low_complexity 1 22 0 1 920 427 278 102 46 chr17 43999588 43999872 -51272779 - B4 SINE B4 -19 273 8 1 920 372 324 7 14 chr17 44001758 44001896 -51270755 + RSINE1 SINE B4 3 139 -26 1 920 386 298 35 9 chr17 44001897 44002012 -51270639 - B4A SINE B4 -154 138 21 2 920 332 217 35 29 chr17 44002573 44002700 -51269951 + MTE2a LTR MaLR 286 418 -1 3 920 241 179 44 15 chr17 44002794 44002862 -51269789 + CT-rich Low_complexity Low_complexity 4 73 0 4 920 849 92 0 0 chr17 44003398 44003518 -51269133 + (TTTC)n Simple_repeat Simple_repeat 4 123 0 5 920 504 48 0 0 chr17 44003692 44003755 -51268896 + (TTCC)n Simple_repeat Simple_repeat 1 63 0 6 920 1027 207 56 0 chr17 44004737 44004935 -51267716 + B3 SINE B2 1 209 -7 7 920 605 267 98 65 chr17 44005202 44005478 -51267173 - B4 SINE B4 -3 289 5 8 920 195 234 0 111 chr17 44005656 44005728 -51266923 - L2 LINE L2 -2104 1315 1252 9 920 372 43 0 0 chr17 44006055 44006101 -51266550 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 920 382 314 77 21 chr17 44007339 44007573 -51265078 - MER63D DNA AcHobo -778 283 37 1 920 271 272 123 0 chr17 44008050 44008131 -51264520 + B4A SINE B4 5 95 -197 1 920 643 225 57 17 chr17 44008131 44008307 -51264344 + B3A SINE B2 1 183 -15 1 920 30 0 0 0 chr17 44008377 44008407 -51264244 + AT_rich Low_complexity Low_complexity 1 30 0 1 920 255 253 283 9 chr17 44008413 44008556 -51264095 + B4A SINE B4 83 276 -16 1 920 468 0 0 0 chr17 44008570 44008622 -51264029 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 920 215 318 101 18 chr17 44008725 44008834 -51263817 + MIRb SINE MIR 113 230 -38 1 920 673 261 199 3 chr17 44008889 44009196 -51263455 + ORR1D2 LTR MaLR 2 368 -2 1 920 5097 104 7 5 chr17 44009574 44010588 -51262063 - Lx2 LINE L1 -692 6305 5288 1 920 2486 130 89 28 chr17 44010592 44011135 -51261516 + Lx2 LINE L1 6014 6645 -352 1 920 300 311 158 24 chr17 44011137 44011384 -51261267 + L1M5 LINE L1 5357 5636 -488 2 920 838 245 63 7 chr17 44012050 44012321 -51260330 - B4A SINE B4 -6 286 1 2 920 1038 223 9 0 chr17 44012588 44012799 -51259852 - B3 SINE B2 -3 213 1 2 920 239 278 22 0 chr17 44012800 44012890 -51259761 - 4.5SRNA scRNA scRNA -2 92 1 2 920 26 30 0 0 chr17 44012892 44012925 -51259726 + AT_rich Low_complexity Low_complexity 1 33 0 2 920 203 146 0 24 chr17 44013141 44013183 -51259468 + CT-rich Low_complexity Low_complexity 3 43 0 2 920 333 0 0 0 chr17 44013193 44013230 -51259421 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 920 26 0 0 0 chr17 44013230 44013256 -51259395 + AT_rich Low_complexity Low_complexity 1 26 0 2 920 259 327 0 10 chr17 44013307 44013409 -51259242 + RMER12 LTR ERVK 750 850 -472 2 920 542 289 67 52 chr17 44013413 44013680 -51258971 - B4A SINE B4 -19 273 3 2 920 252 154 0 0 chr17 44014913 44014965 -51257686 + T-rich Low_complexity Low_complexity 1 52 0 3 920 1095 95 0 13 chr17 44014966 44015115 -51257536 - B1_Mus1 SINE Alu -1 147 1 3 920 238 264 0 0 chr17 44015259 44015312 -51257339 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 920 1010 272 49 58 chr17 44015317 44015645 -51257006 - Lx8 LINE L1 -147 7326 7002 3 920 228 163 0 0 chr17 44016032 44016075 -51256576 + CT-rich Low_complexity Low_complexity 3 45 0 3 920 493 275 119 76 chr17 44017046 44017231 -51255420 + B4 SINE B4 1 193 -99 3 920 1397 70 32 0 chr17 44017348 44017533 -51255118 + B2_Mm1a SINE B2 1 191 -2 3 920 288 0 0 0 chr17 44018079 44018111 -51254540 + (AGGGGG)n Simple_repeat Simple_repeat 3 34 0 3 920 276 224 105 0 chr17 44018328 44018404 -51254247 - L1MB4 LINE L1 -115 6065 5982 3 920 1090 146 19 28 chr17 44018411 44018622 -51254029 - URR1B DNA MER1_type 0 225 17 3 920 865 229 0 0 chr17 44018625 44018813 -51253838 - L1MB3 LINE L1 -193 5990 5803 4 920 342 250 54 11 chr17 44018940 44019033 -51253618 + MTEb LTR MaLR 229 325 -54 4 920 272 281 0 0 chr17 44019056 44019113 -51253538 + B3 SINE B2 96 152 -64 4 920 216 0 0 0 chr17 44019113 44019137 -51253514 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 920 243 301 0 114 chr17 44019137 44019186 -51253465 + B3A SINE B2 155 192 -6 4 920 29 0 0 0 chr17 44019265 44019294 -51253357 + AT_rich Low_complexity Low_complexity 1 29 0 4 920 217 210 0 36 chr17 44020285 44020369 -51252282 + (TAGA)n Simple_repeat Simple_repeat 2 82 0 4 920 710 167 0 6 chr17 44020391 44020572 -51252079 + (TA)n Simple_repeat Simple_repeat 1 180 0 4 920 249 108 0 0 chr17 44020572 44020609 -51252042 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 920 238 362 68 82 chr17 44020664 44020808 -51251843 - MLT2B3 LTR ERVL -52 618 468 4 920 186 133 0 0 chr17 44020808 44020838 -51251813 + (CTG)n Simple_repeat Simple_repeat 3 32 0 4 920 238 362 68 82 chr17 44020838 44020973 -51251678 - MLT2B3 LTR ERVL -203 467 343 4 920 204 0 26 53 chr17 44020979 44021017 -51251634 + (GGGAGA)n Simple_repeat Simple_repeat 2 38 0 5 920 473 307 43 11 chr17 44021063 44021221 -51251430 - MLT2B3 LTR ERVL -368 349 192 4 920 2083 131 119 6 chr17 44021221 44021575 -51251076 - ORR1B1 LTR MaLR 0 394 1 5 920 473 304 44 5 chr17 44021575 44021646 -51251005 - MLT2B3 LTR ERVL -479 191 118 4 920 368 220 29 48 chr17 44021738 44021853 -51250798 + B1F1 SINE Alu 1 113 -36 5 920 1160 7 7 0 chr17 44021867 44022004 -51250647 + (TAGA)n Simple_repeat Simple_repeat 1 138 0 5 920 207 100 0 0 chr17 44022330 44022360 -51250291 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 920 429 307 72 24 chr17 44022381 44022588 -51250063 - B4A SINE B4 -15 277 61 5 920 648 239 29 63 chr17 44022597 44022771 -51249880 - B3A SINE B2 -30 168 1 5 920 180 0 0 0 chr17 44022782 44022802 -51249849 + (T)n Simple_repeat Simple_repeat 1 20 0 5 920 1066 69 0 0 chr17 44022802 44022947 -51249704 - B1_Mus2 SINE Alu 0 147 3 5 920 419 214 0 104 chr17 44022847 44022962 -51249689 - MT2B LTR ERVL -344 257 155 5 920 29 0 0 0 chr17 44023919 44023948 -51248703 + AT_rich Low_complexity Low_complexity 1 29 0 6 920 713 194 6 0 chr17 44024014 44024174 -51248477 + C-rich Low_complexity Low_complexity 5 165 0 6 920 356 162 55 21 chr17 44024185 44024330 -51248321 + CT-rich Low_complexity Low_complexity 2 151 0 6 920 611 295 103 55 chr17 44024330 44024929 -51247722 - Lx7 LINE L1 -915 6135 5572 6 920 634 268 0 32 chr17 44025651 44025805 -51246846 - B1_Mur1 SINE Alu 0 149 1 6 920 279 0 0 0 chr17 44025824 44025855 -51246796 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 920 429 241 17 69 chr17 44025884 44026000 -51246651 - B3A SINE B2 -80 118 9 6 920 298 291 9 0 chr17 44026191 44026301 -51246350 + (TATATG)n Simple_repeat Simple_repeat 4 114 0 6 920 304 319 47 27 chr17 44026306 44026454 -51246197 + MTD LTR MaLR 1 151 -268 6 920 570 269 108 61 chr17 44026903 44027180 -51245471 + B4 SINE B4 2 291 -1 6 920 180 0 0 0 chr17 44027901 44027921 -51244730 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 7 920 293 309 39 36 chr17 44028850 44029071 -51243580 + B4A SINE B4 8 292 0 7 920 246 218 0 0 chr17 44029121 44029176 -51243475 + (CA)n Simple_repeat Simple_repeat 1 55 0 7 920 426 347 87 59 chr17 44029526 44029881 -51242770 + MLT1C LTR MaLR 69 433 -34 7 920 585 246 23 8 chr17 44030055 44030186 -51242465 - RSINE1 SINE B4 -31 134 2 7 920 432 306 8 8 chr17 44030842 44030964 -51241687 + B3 SINE B2 77 198 -18 7 920 184 259 9 9 chr17 44031515 44031624 -51241027 + CT-rich Low_complexity Low_complexity 2 110 0 7 920 369 109 0 0 chr17 44031677 44031732 -51240919 + (TG)n Simple_repeat Simple_repeat 1 55 0 7 920 400 275 114 69 chr17 44031761 44032007 -51240644 - B4 SINE B4 -18 274 18 7 920 534 16 0 0 chr17 44032007 44032070 -51240581 + (TC)n Simple_repeat Simple_repeat 2 64 0 7 920 569 277 106 19 chr17 44032824 44033089 -51239562 - RMER15 LTR ERVL -14 561 274 8 920 243 275 163 37 chr17 44033588 44033803 -51238848 + L2 LINE L2 2184 2425 -994 8 920 210 351 13 0 chr17 44034247 44034324 -51238327 + ID4 SINE ID 6 83 0 8 920 195 100 0 0 chr17 44035073 44035103 -51237548 + (TCC)n Simple_repeat Simple_repeat 1 30 0 8 920 500 306 15 5 chr17 44035438 44035622 -51237029 + B4 SINE B4 40 226 -66 8 920 258 61 40 20 chr17 44037816 44037866 -51234785 + (CA)n Simple_repeat Simple_repeat 1 51 0 8 920 261 227 13 13 chr17 44037904 44037980 -51234671 + (TA)n Simple_repeat Simple_repeat 1 76 0 8 920 824 245 10 48 chr17 44038145 44038351 -51234300 + B3A SINE B2 1 198 0 8 920 1034 307 20 78 chr17 44038376 44038694 -51233957 + RCHARR1 DNA MER1_type 1 305 -669 8 920 183 42 0 0 chr17 44038694 44038718 -51233933 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 8 920 1034 307 20 78 chr17 44038718 44038887 -51233764 + RCHARR1 DNA MER1_type 306 460 -514 8 920 230 242 45 0 chr17 44038898 44038964 -51233687 + RCHARR1 DNA MER1_type 753 821 -153 8 920 292 296 163 43 chr17 44038999 44039140 -51233511 - RSINE1 SINE B4 -6 159 2 9 920 513 227 39 50 chr17 44039140 44039313 -51233338 + RCHARR1 DNA MER1_type 798 968 -6 8 920 232 292 33 11 chr17 44040081 44040171 -51232480 - MER5A DNA MER1_type -37 152 61 9 921 458 277 41 41 chr17 44040202 44040220 -51232431 - B4A SINE B4 -2 290 273 9 921 585 0 0 0 chr17 44040220 44040285 -51232366 + (TG)n Simple_repeat Simple_repeat 2 66 0 9 921 458 277 41 41 chr17 44040285 44040413 -51232238 - B4A SINE B4 -20 272 144 9 921 200 293 17 0 chr17 44040521 44040579 -51232072 - MER5A DNA MER1_type -117 72 14 9 921 189 0 0 0 chr17 44040692 44040713 -51231938 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 9 921 303 254 0 27 chr17 44040933 44041006 -51231645 + MER46C DNA MER2_type 259 329 -9 9 921 650 281 6 22 chr17 44041627 44041809 -51230842 + Lx8 LINE L1 6631 6809 -664 9 921 398 289 108 80 chr17 44042232 44042433 -51230218 + B3A SINE B2 1 205 -11 9 921 292 262 0 0 chr17 44043030 44043104 -51229547 - B4A SINE B4 -217 75 2 9 921 315 0 0 0 chr17 44043428 44043463 -51229188 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 9 921 238 0 81 0 chr17 44043713 44043750 -51228901 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1 921 4707 176 60 7 chr17 44043756 44044602 -51228049 - Lx5 LINE L1 -9 7041 6151 1 921 1137 238 47 4 chr17 44045152 44045431 -51227220 - MTD LTR MaLR 0 419 129 1 921 276 231 0 0 chr17 44045764 44045868 -51226783 + (CA)n Simple_repeat Simple_repeat 1 104 0 1 921 429 244 0 0 chr17 44045973 44046149 -51226502 + (CA)n Simple_repeat Simple_repeat 1 176 0 1 921 303 253 0 0 chr17 44046173 44046343 -51226308 + (CA)n Simple_repeat Simple_repeat 1 170 0 1 921 209 125 16 97 chr17 44047279 44047341 -51225310 + (GGGTG)n Simple_repeat Simple_repeat 4 60 0 1 921 1324 235 15 111 chr17 44047920 44048379 -51224272 - MTD LTR MaLR 0 419 5 1 921 1092 189 9 40 chr17 44048798 44049024 -51223627 + URR1A DNA MER1_type 1 219 -7 1 921 6608 50 2 54 chr17 44049229 44050131 -51222520 - L1_Mm LINE L1 -730 5153 4299 1 921 6205 43 1 4 chr17 44050131 44050876 -51221775 + L1Md_F2 LINE L1 5839 6581 -1 1 921 208 28 26 53 chr17 44050912 44050950 -51221701 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 1 921 259 331 26 78 chr17 44051029 44051183 -51221468 + B4 SINE B4 8 153 -139 1 921 314 143 0 16 chr17 44051286 44051350 -51221301 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 921 681 278 108 65 chr17 44052649 44053018 -51219633 - MER31B LTR ERV1 -81 385 1 1 921 548 154 0 9 chr17 44054031 44054136 -51218515 + CT-rich Low_complexity Low_complexity 3 106 0 1 921 324 0 0 0 chr17 44054149 44054185 -51218466 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 921 355 334 138 17 chr17 44054268 44054615 -51218036 - L2a LINE L2 -67 3359 2971 1 921 269 270 174 35 chr17 44054991 44055106 -51217545 - Tigger5 DNA MER2_type -2192 214 84 1 921 459 0 0 0 chr17 44055497 44055548 -51217103 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 921 22 80 0 0 chr17 44055932 44055982 -51216669 + AT_rich Low_complexity Low_complexity 1 50 0 1 921 617 272 63 24 chr17 44056042 44056249 -51216402 + B3 SINE B2 2 216 0 1 921 2555 150 35 26 chr17 44056429 44056881 -51215770 + Lx LINE L1 6197 6652 -2 1 921 662 247 42 20 chr17 44057427 44057619 -51215032 + B3 SINE B2 25 216 0 1 921 436 305 92 7 chr17 44058669 44058811 -51213840 + B3A SINE B2 1 154 -44 1 921 510 193 21 7 chr17 44058826 44058967 -51213684 + CT-rich Low_complexity Low_complexity 6 148 0 1 921 486 0 0 0 chr17 44058967 44059021 -51213630 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 921 261 304 17 78 chr17 44059503 44059665 -51212986 + MIRb SINE MIR 1 142 -120 1 921 396 287 9 9 chr17 44060225 44060334 -51212317 + RSINE1 SINE B4 3 111 -54 1 921 2229 222 43 94 chr17 44060430 44061216 -51211435 - RMER17B LTR ERVK -198 760 15 1 921 324 0 0 0 chr17 44061266 44061302 -51211349 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 921 564 297 25 25 chr17 44061431 44061590 -51211061 + B3A SINE B2 1 159 -39 1 921 415 0 18 18 chr17 44061605 44061661 -51210990 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 921 528 16 0 0 chr17 44062944 44063005 -51209646 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 921 1029 241 111 35 chr17 44063162 44063506 -51209145 + ORR1D2 LTR MaLR 1 370 0 1 921 387 0 0 0 chr17 44063915 44063958 -51208693 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1 921 1139 75 0 7 chr17 44063958 44064096 -51208555 - B1_Mus2 SINE Alu -9 138 1 1 921 722 200 35 14 chr17 44064371 44064513 -51208138 - B1_Mur1 SINE Alu 0 149 5 1 921 2168 128 8 11 chr17 44064820 44065183 -51207468 - ORR1B1 LTR MaLR -4 390 29 1 921 394 306 8 0 chr17 44065294 44065415 -51207236 - L1MC4a LINE L1 0 7882 7761 1 921 663 256 58 27 chr17 44065484 44065709 -51206942 - B4A SINE B4 -59 233 2 1 921 698 40 80 0 chr17 44065931 44066031 -51206620 + L1Md_F3 LINE L1 6463 6570 -14 1 921 507 17 0 0 chr17 44067822 44067882 -51204769 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 921 542 267 77 16 chr17 44067950 44068133 -51204518 + B3A SINE B2 4 197 -1 1 921 746 179 72 56 chr17 44069103 44069298 -51203353 - B3 SINE B2 0 216 19 1 921 544 175 23 23 chr17 44069494 44069623 -51203028 - Lx3B LINE L1 -1 6972 6844 1 921 2543 123 36 6 chr17 44069631 44070074 -51202577 - Lx3B LINE L1 -39 6970 6485 1 921 24 0 0 0 chr17 44070089 44070113 -51202538 + AT_rich Low_complexity Low_complexity 1 24 0 1 921 1129 251 112 3 chr17 44070156 44070460 -51202191 + MTD LTR MaLR 68 404 -15 1 921 288 276 89 82 chr17 44070856 44071014 -51201637 + RSINE1 SINE B4 5 163 -2 1 921 1133 249 118 16 chr17 44071602 44071982 -51200669 + MTD LTR MaLR 1 419 0 1 921 283 319 9 9 chr17 44072323 44072437 -51200214 - L1ME4a LINE L1 -57 6067 5954 1 921 244 256 64 28 chr17 44072911 44073052 -51199599 - L1MEc LINE L1 -3199 3120 2975 1 921 1158 230 32 67 chr17 44073113 44073454 -51199197 - ORR1E LTR MaLR -6 353 25 1 921 390 327 66 74 chr17 44073912 44074384 -51198267 - L1MEc LINE L1 -4005 2395 1928 1 921 41928 4 2 0 chr17 44075332 44081892 -51190759 - L1Md_A LINE L1 0 6582 7 1 921 22 0 0 0 chr17 44081916 44081938 -51190713 + AT_rich Low_complexity Low_complexity 1 22 0 1 921 267 180 20 0 chr17 44082703 44082753 -51189898 - B4 SINE B4 -121 171 121 1 921 360 0 0 0 chr17 44082782 44082822 -51189829 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 921 1607 131 130 3 chr17 44082826 44083133 -51189518 + RMER20A LTR ERVK 7 352 -164 1 921 657 322 20 46 chr17 44083654 44083957 -51188694 + L1MC4 LINE L1 6690 6984 -1058 1 921 328 236 14 0 chr17 44084519 44084600 -51188051 - MER5A1 DNA MER1_type -79 87 6 1 921 29 0 0 0 chr17 44085376 44085405 -51187246 + AT_rich Low_complexity Low_complexity 1 29 0 1 921 438 20 0 0 chr17 44085412 44085463 -51187188 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 921 723 300 47 14 chr17 44085483 44085760 -51186891 - B4A SINE B4 -6 286 1 1 921 941 224 40 5 chr17 44085963 44086165 -51186486 - ORR1C2 LTR MaLR -2 382 174 1 921 471 35 0 0 chr17 44086191 44086248 -51186403 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 921 6779 165 46 103 chr17 44086298 44087593 -51185058 - Lx5 LINE L1 -4 7054 5727 1 921 1156 68 0 20 chr17 44087593 44087743 -51184908 + B1_Mus1 SINE Alu 2 148 0 1 921 6577 128 3 223 chr17 44087743 44088221 -51184430 - Lx5 LINE L1 -1322 5736 5382 1 921 235 32 0 0 chr17 44088221 44088252 -51184399 - ORR1C2 LTR MaLR -343 31 1 1 921 243 0 0 0 chr17 44088790 44088817 -51183834 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 921 212 296 101 9 chr17 44089213 44089322 -51183329 - L2c LINE L2 0 3387 3269 1 921 474 18 0 0 chr17 44090030 44090085 -51182566 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 921 441 0 0 0 chr17 44090138 44090187 -51182464 + (GA)n Simple_repeat Simple_repeat 1 49 0 1 921 528 93 0 0 chr17 44091349 44091424 -51181227 + (GA)n Simple_repeat Simple_repeat 2 76 0 1 921 226 181 78 0 chr17 44092529 44092599 -51180052 + MIR SINE MIR 92 173 -95 1 921 292 266 121 89 chr17 44093170 44093327 -51179324 + B3 SINE B2 7 168 -48 1 921 303 28 0 0 chr17 44093333 44093369 -51179282 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 921 566 278 13 19 chr17 44093508 44093666 -51178985 + B3 SINE B2 59 215 -1 1 921 248 309 12 36 chr17 44094308 44094392 -51178259 - MER5B DNA MER1_type -4 174 93 1 921 213 282 38 25 chr17 44094989 44095069 -51177582 - L2a LINE L2 -70 3356 3276 1 921 736 193 199 0 chr17 44095324 44095495 -51177156 - B3 SINE B2 -11 205 1 1 921 284 286 53 26 chr17 44095554 44095744 -51176907 - L1MA6 LINE L1 0 6300 6106 1 921 405 0 0 0 chr17 44095756 44095801 -51176850 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 921 405 0 0 0 chr17 44096686 44096731 -51175920 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 921 1091 234 11 49 chr17 44097435 44097700 -51174951 - Lx6 LINE L1 -26 7434 7180 1 921 651 275 67 10 chr17 44098571 44098780 -51173871 - 7SK RNA RNA -95 236 16 1 921 406 96 14 14 chr17 44098830 44098904 -51173747 + (TC)n Simple_repeat Simple_repeat 2 75 0 1 921 790 269 34 5 chr17 44099531 44099740 -51172911 - ID_B1 SINE B4 -3 221 7 1 921 197 298 83 0 chr17 44099860 44099944 -51172707 + L2a LINE L2 3264 3354 -72 1 921 621 100 0 0 chr17 44100825 44100915 -51171736 + (TG)n Simple_repeat Simple_repeat 2 91 0 1 921 706 289 52 9 chr17 44100915 44101145 -51171506 - B4 SINE B4 -23 269 30 1 921 717 168 13 65 chr17 44102478 44102631 -51170020 - B1_Mur4 SINE Alu 0 150 6 1 921 264 305 50 25 chr17 44102896 44103017 -51169634 - MLT1J LTR MaLR -384 128 5 1 921 1206 289 39 22 chr17 44103215 44103576 -51169075 + MTE2b LTR MaLR 1 367 -12 1 921 192 357 124 23 chr17 44105306 44105435 -51167216 + L2a LINE L2 3278 3419 -7 1 921 202 212 18 88 chr17 44106023 44106080 -51166571 - L2a LINE L2 -16 3410 3358 1 921 22 0 0 0 chr17 44106089 44106111 -51166540 + AT_rich Low_complexity Low_complexity 1 22 0 1 921 444 147 0 0 chr17 44106298 44106373 -51166278 + (TGG)n Simple_repeat Simple_repeat 1 75 0 1 921 185 326 85 11 chr17 44106807 44106984 -51165667 - L2a LINE L2 -119 3307 3118 1 921 360 0 0 0 chr17 44107429 44107469 -51165182 + (TGGA)n Simple_repeat Simple_repeat 1 40 0 1 921 239 147 368 13 chr17 44108907 44108983 -51163668 - PB1D10 SINE Alu -10 107 5 1 921 554 252 16 131 chr17 44109244 44109427 -51163224 + RSINE1 SINE B4 4 165 0 1 921 908 276 124 23 chr17 44109438 44109991 -51162660 + L1ME3 LINE L1 5128 5734 -439 1 921 246 167 0 40 chr17 44110121 44110171 -51162480 + L1ME3 LINE L1 5937 5984 -178 1 921 21 0 0 0 chr17 44110320 44110341 -51162310 + AT_rich Low_complexity Low_complexity 1 21 0 2 921 313 264 48 40 chr17 44112133 44112259 -51160392 - Lx8 LINE L1 -371 7102 6976 2 921 879 10 0 0 chr17 44112432 44112532 -51160119 + (TTC)n Simple_repeat Simple_repeat 3 102 0 2 921 681 280 23 27 chr17 44112533 44112753 -51159898 - ID_B1 SINE B4 -3 221 3 2 921 227 368 97 7 chr17 44112756 44112901 -51159750 + L2 LINE L2 2721 2878 -541 2 921 225 94 0 0 chr17 44113764 44113796 -51158855 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 2 921 293 260 0 48 chr17 44114467 44114572 -51158079 - MIR SINE MIR -60 202 103 2 921 181 250 70 18 chr17 44115217 44115274 -51157377 + MIRb SINE MIR 114 173 -95 2 921 639 106 0 0 chr17 44115380 44115474 -51157177 + BC1_Mm scRNA scRNA 1 94 -58 2 921 339 268 0 0 chr17 44116636 44116804 -51155847 + (TA)n Simple_repeat Simple_repeat 2 169 0 2 921 21 0 0 0 chr17 44117720 44117741 -51154910 + AT_rich Low_complexity Low_complexity 1 21 0 2 921 573 282 77 84 chr17 44118130 44118416 -51154235 - B4A SINE B4 -4 288 5 2 921 335 260 26 0 chr17 44118685 44118762 -51153889 - ID4_ SINE ID -2 81 3 2 921 239 223 48 5 chr17 44118763 44118846 -51153805 - PB1D10 SINE Alu -21 128 38 2 921 188 86 0 28 chr17 44119041 44119077 -51153574 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 2 921 207 0 0 0 chr17 44119094 44119117 -51153534 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2 921 1226 241 86 30 chr17 44119554 44119892 -51152759 + ORR1E LTR MaLR 1 357 -2 2 921 376 335 71 50 chr17 44120635 44120833 -51151818 + B4 SINE B4 4 205 -87 2 921 207 170 0 0 chr17 44120878 44120925 -51151726 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 921 213 301 8 31 chr17 44120928 44121013 -51151638 + (CAGAGA)n Simple_repeat Simple_repeat 5 86 0 2 921 8237 30 0 1 chr17 44121013 44121964 -51150687 + L1Md_F2 LINE L1 5632 6581 -1 2 921 213 301 8 31 chr17 44121964 44122005 -51150646 + (CAGAGA)n Simple_repeat Simple_repeat 3 44 0 2 921 766 173 0 22 chr17 44122014 44122197 -51150454 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 921 317 143 0 0 chr17 44122207 44122256 -51150395 + HAL1-3A_ME LINE L1 1975 2023 -835 2 921 479 60 0 15 chr17 44122421 44122489 -51150162 + (TC)n Simple_repeat Simple_repeat 2 68 0 2 921 231 241 38 12 chr17 44123160 44123240 -51149411 - Lx7 LINE L1 0 7696 7615 2 921 588 29 0 0 chr17 44123251 44123321 -51149330 + (TC)n Simple_repeat Simple_repeat 1 70 0 2 921 275 49 24 0 chr17 44123321 44123361 -51149290 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 921 568 226 88 25 chr17 44123396 44123555 -51149096 - Lx7 LINE L1 -336 7360 7192 2 921 1790 156 55 105 chr17 44125295 44125695 -51146956 + ORR1C2 LTR MaLR 1 380 -4 2 921 208 147 0 0 chr17 44125827 44125861 -51146790 + (TTA)n Simple_repeat Simple_repeat 2 35 0 2 921 323 225 0 0 chr17 44126298 44126369 -51146282 - MTEb LTR MaLR 0 379 309 2 921 291 265 34 63 chr17 44127289 44127391 -51145260 + MIRb SINE MIR 75 173 -95 2 921 485 260 103 34 chr17 44127439 44127614 -51145037 + B3A SINE B2 2 188 -28 2 921 266 266 0 48 chr17 44127639 44127722 -51144929 + L1MA8 LINE L1 6213 6291 0 2 921 342 0 0 0 chr17 44128400 44128438 -51144213 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 921 228 35 0 0 chr17 44128438 44128466 -51144185 + (TC)n Simple_repeat Simple_repeat 1 29 0 2 921 230 305 24 71 chr17 44129448 44129575 -51143076 - MIRc SINE MIR -46 222 102 2 921 1102 265 70 6 chr17 44129663 44130008 -51142643 + ORR1D2 LTR MaLR 1 367 -3 2 921 234 0 0 0 chr17 44130253 44130279 -51142372 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 921 466 250 107 7 chr17 44131065 44131214 -51141437 - MTEa LTR MaLR 0 379 216 2 921 450 0 0 0 chr17 44131729 44131779 -51140872 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 921 462 296 63 22 chr17 44132320 44132590 -51140061 - B4A SINE B4 -8 284 4 2 921 1839 144 13 83 chr17 44132941 44133313 -51139338 - ORR1B1 LTR MaLR -8 386 41 2 921 1377 244 65 53 chr17 44135367 44135800 -51136851 + Lx8 LINE L1 7031 7468 -5 2 921 1659 177 92 49 chr17 44136106 44136474 -51136177 - ORR1C2 LTR MaLR 0 384 1 2 921 304 265 54 100 chr17 44136614 44136744 -51135907 + B4A SINE B4 4 127 -165 2 921 201 146 0 0 chr17 44136844 44136892 -51135759 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 921 272 278 110 11 chr17 44136963 44137054 -51135597 - MER58A DNA MER1_type -120 104 5 2 921 198 206 0 0 chr17 44137673 44137741 -51134910 + (CTG)n Simple_repeat Simple_repeat 1 68 0 2 921 231 152 0 0 chr17 44137727 44137773 -51134878 + (ATGGTG)n Simple_repeat Simple_repeat 2 47 0 2 921 2093 51 0 128 chr17 44137786 44138121 -51134530 - RLTR10B LTR ERVK 0 292 1 2 921 357 62 0 0 chr17 44138201 44138249 -51134402 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 921 848 225 118 14 chr17 44138260 44138472 -51134179 - B4 SINE B4 -58 234 1 2 921 1896 163 85 11 chr17 44138673 44139051 -51133600 - MTC LTR MaLR 0 421 16 2 921 368 268 9 18 chr17 44139672 44139786 -51132865 + L1M2 LINE L1 5523 5635 -662 2 921 3142 20 0 0 chr17 44140245 44140591 -51132060 + ORR1A0 LTR MaLR 1 346 0 2 921 321 26 0 0 chr17 44141268 44141306 -51131345 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 921 602 200 63 8 chr17 44141326 44141452 -51131199 - B3A SINE B2 -65 133 1 2 921 5145 88 29 10 chr17 44141846 44142567 -51130084 - L1_Mus3 LINE L1 -1 6637 5903 2 921 198 0 0 0 chr17 44143495 44143517 -51129134 + (A)n Simple_repeat Simple_repeat 1 22 0 2 921 3429 15 5 34 chr17 44143683 44144091 -51128560 - MTA_Mm LTR MaLR 0 396 1 2 921 822 261 44 13 chr17 44144331 44144560 -51128091 - B4 SINE B4 -36 256 21 2 921 2113 167 62 13 chr17 44144608 44144996 -51127655 + MTB_Mm LTR MaLR 1 407 0 2 921 1564 202 111 11 chr17 44145901 44146281 -51126370 - MTD LTR MaLR -1 418 1 2 921 21 0 0 0 chr17 44146752 44146773 -51125878 + AT_rich Low_complexity Low_complexity 1 21 0 2 921 472 312 228 20 chr17 44146897 44147344 -51125307 + MER21B LTR ERV1 212 751 -112 2 921 950 214 165 48 chr17 44149960 44150136 -51122515 + Lx8 LINE L1 7129 7336 -137 2 921 876 239 24 9 chr17 44150136 44150347 -51122304 + B3 SINE B2 1 214 -2 2 921 950 214 165 48 chr17 44150347 44150479 -51122172 + Lx8 LINE L1 7337 7473 0 2 921 357 295 219 25 chr17 44150953 44151666 -51120985 + Charlie1a DNA MER1_type 601 1439 -16 2 921 23 33 0 0 chr17 44151933 44151963 -51120688 + AT_rich Low_complexity Low_complexity 1 30 0 2 921 388 240 203 78 chr17 44152103 44152342 -51120309 + MTE2a LTR MaLR 130 419 0 2 921 23 33 0 0 chr17 44152548 44152578 -51120073 + AT_rich Low_complexity Low_complexity 1 30 0 2 921 475 326 20 25 chr17 44153688 44153889 -51118762 + B4A SINE B4 83 282 -10 2 921 432 0 0 0 chr17 44153909 44153957 -51118694 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 921 307 237 143 10 chr17 44154911 44155009 -51117642 + B3 SINE B2 14 124 -71 2 921 512 56 0 14 chr17 44155023 44155096 -51117555 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 921 24 0 0 0 chr17 44155163 44155187 -51117464 + AT_rich Low_complexity Low_complexity 1 24 0 2 921 696 241 0 0 chr17 44155195 44155336 -51117315 + B3 SINE B2 1 141 -75 2 921 1098 201 207 7 chr17 44155391 44155696 -51116955 + Lx8 LINE L1 7096 7461 -12 2 921 254 310 10 0 chr17 44155838 44155938 -51116713 + MIR SINE MIR 90 190 -72 2 921 356 179 15 0 chr17 44156486 44156553 -51116098 + PB1D10 SINE Alu 46 113 -4 2 921 607 65 0 21 chr17 44156553 44156648 -51116003 + (TG)n Simple_repeat Simple_repeat 2 94 0 2 921 241 125 36 0 chr17 44156668 44156724 -51115927 + (CATA)n Simple_repeat Simple_repeat 3 60 0 2 921 692 289 108 15 chr17 44156760 44157134 -51115517 + L1MB7 LINE L1 5587 5995 -179 2 921 1306 109 16 11 chr17 44157171 44157357 -51115294 + B2_Mm2 SINE B2 1 187 -8 2 921 826 178 37 6 chr17 44157407 44157571 -51115080 - URR1B DNA MER1_type -1 224 56 2 921 351 350 56 0 chr17 44157558 44157701 -51114950 + B4 SINE B4 138 288 -4 2 921 621 27 0 0 chr17 44158520 44158595 -51114056 + (TG)n Simple_repeat Simple_repeat 2 76 0 2 921 204 40 0 0 chr17 44159306 44159331 -51113320 + (G)n Simple_repeat Simple_repeat 1 25 0 2 921 189 0 0 0 chr17 44159988 44160009 -51112642 + (CG)n Simple_repeat Simple_repeat 1 21 0 2 921 441 0 0 0 chr17 44160009 44160057 -51112594 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 921 739 287 80 25 chr17 44160085 44160165 -51112486 - B4 SINE B4 0 292 213 2 921 299 25 25 0 chr17 44160165 44160205 -51112446 + (TTGG)n Simple_repeat Simple_repeat 4 44 0 2 921 739 287 80 25 chr17 44160205 44160399 -51112252 - B4 SINE B4 -80 212 3 2 921 289 290 9 45 chr17 44161336 44161448 -51111203 - MLT1A1 LTR MaLR -10 398 291 2 921 294 325 83 8 chr17 44161471 44161488 -51111163 + B4 SINE B4 67 196 -96 2 921 472 221 29 0 chr17 44161488 44161592 -51111059 + B1_Mur1 SINE Alu 1 107 -42 2 921 289 200 31 0 chr17 44161592 44161657 -51110994 + (TA)n Simple_repeat Simple_repeat 2 68 0 2 921 363 136 0 0 chr17 44161657 44161716 -51110935 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 921 306 278 0 100 chr17 44162051 44162151 -51110500 + L2c LINE L2 3292 3381 -6 2 921 1320 288 68 28 chr17 44162482 44162985 -51109666 - Lx8 LINE L1 -92 7381 6859 2 921 195 100 0 0 chr17 44163265 44163295 -51109356 + (A)n Simple_repeat Simple_repeat 1 30 0 3 921 766 248 13 0 chr17 44163902 44164059 -51108592 + RSINE1 SINE B4 3 161 -4 3 921 435 19 0 0 chr17 44164066 44164118 -51108533 + (TAAA)n Simple_repeat Simple_repeat 3 54 0 3 921 437 174 0 10 chr17 44164783 44164882 -51107769 + CT-rich Low_complexity Low_complexity 3 100 0 3 921 204 194 0 0 chr17 44164887 44164923 -51107728 + (CCA)n Simple_repeat Simple_repeat 2 37 0 3 921 737 285 92 23 chr17 44165169 44165431 -51107220 + B4A SINE B4 13 292 0 3 921 579 206 0 0 chr17 44165435 44165590 -51107061 + (CA)n Simple_repeat Simple_repeat 1 155 0 3 921 223 276 0 0 chr17 44165591 44165649 -51107002 + (CATATA)n Simple_repeat Simple_repeat 1 58 0 3 921 648 222 0 0 chr17 44165649 44165829 -51106822 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 921 775 97 11 74 chr17 44165823 44166013 -51106638 + (CATA)n Simple_repeat Simple_repeat 1 178 0 3 921 303 248 0 0 chr17 44166054 44166159 -51106492 + (CA)n Simple_repeat Simple_repeat 2 106 0 3 921 195 242 47 7 chr17 44168514 44168664 -51103987 + GA-rich Low_complexity Low_complexity 1 156 0 3 921 535 244 32 0 chr17 44168669 44168792 -51103859 + B1F SINE Alu 1 127 -22 3 921 359 169 42 0 chr17 44168792 44168863 -51103788 + B1F SINE Alu 70 143 -6 3 921 576 0 0 0 chr17 44168988 44169052 -51103599 + (TC)n Simple_repeat Simple_repeat 1 64 0 3 921 399 56 0 0 chr17 44169052 44169105 -51103546 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 921 201 182 23 0 chr17 44169336 44169380 -51103271 + A-rich Low_complexity Low_complexity 2 46 0 3 921 300 364 17 74 chr17 44169810 44169985 -51102666 + B4 SINE B4 3 167 -125 3 921 591 259 222 43 chr17 44170154 44170269 -51102382 - MLT1C LTR MaLR 0 467 335 3 921 198 0 0 0 chr17 44170269 44170291 -51102360 + (TC)n Simple_repeat Simple_repeat 2 23 0 3 921 591 259 222 43 chr17 44170291 44170571 -51102080 - MLT1C LTR MaLR -133 334 2 3 922 1684 125 29 4 chr17 44171420 44171701 -51100950 - ORR1A4 LTR MaLR -41 288 1 3 922 908 114 0 6 chr17 44171814 44171982 -51100669 + (GA)n Simple_repeat Simple_repeat 2 168 0 3 922 232 294 86 22 chr17 44172218 44172357 -51100294 - ORR1E LTR MaLR 0 374 227 3 922 450 0 0 0 chr17 44172427 44172477 -51100174 + (TTA)n Simple_repeat Simple_repeat 2 51 0 3 922 277 222 117 27 chr17 44172699 44172810 -51099841 - RLTR15 LTR ERVK -238 121 1 3 922 240 336 9 63 chr17 44172850 44172961 -51099690 - ORR1E LTR MaLR -165 194 90 3 922 1485 271 106 5 chr17 44173243 44173659 -51098992 + Lx5 LINE L1 6590 7047 -3 3 922 763 149 15 7 chr17 44173678 44173802 -51098849 + B1_Mur4 SINE Alu 15 140 -10 3 922 183 28 54 27 chr17 44173802 44173839 -51098812 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3 922 360 0 0 0 chr17 44174430 44174470 -51098181 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 922 450 0 0 0 chr17 44175966 44176016 -51096635 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 922 2463 60 3 3 chr17 44176772 44177091 -51095560 - L1_Mus1 LINE L1 -6 6561 6243 3 922 1024 156 171 5 chr17 44177274 44177467 -51095184 - URR1B DNA MER1_type 0 225 1 3 922 332 217 21 7 chr17 44177954 44178098 -51094553 + (TA)n Simple_repeat Simple_repeat 1 146 0 3 922 341 332 91 61 chr17 44178153 44178416 -51094235 + B4 SINE B4 2 272 -20 3 922 226 308 77 0 chr17 44178495 44178573 -51094078 + L1ME2 LINE L1 5953 6036 -128 3 922 925 281 38 87 chr17 44179057 44179427 -51093224 - MTE2b LTR MaLR -9 370 19 3 922 273 378 75 5 chr17 44180686 44180872 -51091779 + LTR16A LTR ERVL 247 445 -6 3 922 702 193 28 14 chr17 44180901 44181043 -51091608 - B1_Mur1 SINE Alu 0 149 6 3 922 257 283 54 70 chr17 44180930 44181059 -51091592 - MT2B LTR ERVL -323 278 152 3 922 450 263 0 10 chr17 44182126 44182226 -51090425 - B4 SINE B4 -85 207 109 3 922 563 214 23 38 chr17 44182746 44182877 -51089774 + RSINE1 SINE B4 2 130 -35 3 922 489 289 39 23 chr17 44182891 44183084 -51089567 + MLT1B LTR MaLR 191 364 -26 3 922 778 323 55 28 chr17 44183128 44183418 -51089233 + MTEb LTR MaLR 10 307 -72 3 922 376 320 130 96 chr17 44183892 44184424 -51088227 - MLT1F2 LTR MaLR -8 552 3 3 922 1160 263 21 46 chr17 44185232 44185796 -51086855 + RLTR11A LTR ERVK 1 520 -8 3 922 374 276 8 57 chr17 44186032 44186155 -51086496 - RMER30 DNA MER1_type -49 153 37 3 922 230 219 30 30 chr17 44186216 44186282 -51086369 + ID4_ SINE ID 2 67 -16 3 922 994 78 34 48 chr17 44186331 44186478 -51086173 + B1_Mus1 SINE Alu 2 146 -2 3 922 219 36 0 0 chr17 44186479 44186507 -51086144 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 3 922 504 293 14 21 chr17 44186684 44186827 -51085824 - RSINE1 SINE B4 -13 152 11 3 922 189 0 0 0 chr17 44187601 44187622 -51085029 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 3 922 995 280 116 24 chr17 44187976 44188356 -51084295 + MTD LTR MaLR 5 419 0 3 922 243 103 0 0 chr17 44189328 44189367 -51083284 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 922 508 271 8 0 chr17 44189632 44189750 -51082901 - PB1 SINE Alu -7 120 2 3 922 273 270 21 43 chr17 44191007 44191100 -51081551 + CT-rich Low_complexity Low_complexity 4 94 0 3 922 2534 212 63 7 chr17 44191135 44191673 -51080978 - Lx7 LINE L1 -438 7258 6691 3 922 634 284 0 58 chr17 44191707 44191913 -51080738 + B3A SINE B2 1 194 -4 3 922 634 268 124 40 chr17 44192701 44192978 -51079673 + L1M2 LINE L1 5464 5766 -423 3 922 454 31 0 30 chr17 44192978 44193044 -51079607 + (TGG)n Simple_repeat Simple_repeat 1 64 0 3 922 239 315 97 18 chr17 44193044 44193056 -51079595 + L1M2 LINE L1 5767 5778 -411 3 922 822 227 15 44 chr17 44193270 44193473 -51079178 + B3A SINE B2 2 198 0 3 922 651 280 24 12 chr17 44193829 44193999 -51078652 + B3A SINE B2 11 182 -16 3 922 318 50 0 0 chr17 44194010 44194050 -51078601 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 3 922 273 312 92 0 chr17 44194426 44194535 -51078116 + B4A SINE B4 117 235 -57 3 922 234 0 0 0 chr17 44194569 44194595 -51078056 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 922 2137 223 43 6 chr17 44194710 44195180 -51077471 - Lx3C LINE L1 0 6976 6490 3 922 1060 90 0 0 chr17 44196763 44196897 -51075754 - B1_Mm SINE Alu -12 135 2 3 922 2078 174 35 10 chr17 44197008 44197404 -51075247 - MTD LTR MaLR -12 407 2 3 922 1435 232 16 33 chr17 44197753 44198118 -51074533 - ORR1D2 LTR MaLR -11 359 1 3 922 261 0 0 0 chr17 44198137 44198166 -51074485 + (TC)n Simple_repeat Simple_repeat 1 29 0 3 922 648 331 103 4 chr17 44198314 44198575 -51074076 - B4 SINE B4 -4 288 2 3 922 309 325 145 0 chr17 44199388 44199470 -51073181 + B4A SINE B4 44 139 -153 3 922 540 0 0 0 chr17 44199470 44199530 -51073121 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 922 309 317 240 43 chr17 44199530 44199655 -51072996 + B4A SINE B4 134 292 0 3 922 851 229 69 0 chr17 44199733 44199921 -51072730 + B3 SINE B2 3 203 -13 3 922 1637 180 39 42 chr17 44199940 44200290 -51072361 + Lx4B LINE L1 6700 7051 -7 3 922 210 71 0 0 chr17 44200290 44200318 -51072333 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 3 922 290 308 68 23 chr17 44200584 44200803 -51071848 + L1_Rod LINE L1 532 760 -6412 3 922 486 0 0 0 chr17 44201015 44201069 -51071582 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 922 552 299 15 54 chr17 44201125 44201330 -51071321 - B4A SINE B4 -94 198 2 3 922 270 228 43 166 chr17 44202719 44202882 -51069769 + RLTR33 LTR ERVK 450 592 -86 3 922 1222 239 55 44 chr17 44203432 44203795 -51068856 - ORR1D2 LTR MaLR 0 370 4 3 922 320 291 36 80 chr17 44204305 44204443 -51068208 - MTEa LTR MaLR -240 139 8 3 922 1429 294 112 22 chr17 44204479 44204801 -51067850 - MTEa-int LTR MaLR -13 1567 1202 3 922 522 0 0 0 chr17 44204801 44204859 -51067792 + (TG)n Simple_repeat Simple_repeat 2 59 0 3 922 1429 294 112 22 chr17 44204859 44205162 -51067489 - MTEa-int LTR MaLR -379 1201 886 3 922 774 256 29 54 chr17 44205209 44205560 -51067091 - RLTR15 LTR ERVK -16 343 2 3 922 1444 299 58 89 chr17 44205699 44206471 -51066180 - MTEa-int LTR MaLR -832 748 1 3 922 723 294 6 105 chr17 44206473 44206788 -51065863 - MTEa LTR MaLR -3 376 93 3 922 454 313 57 85 chr17 44206916 44207199 -51065452 + B4 SINE B4 3 277 -15 3 922 1669 118 158 0 chr17 44207215 44207519 -51065132 - ORR1B2 LTR MaLR -15 352 1 3 922 270 0 0 0 chr17 44207524 44207554 -51065097 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 922 933 276 34 119 chr17 44208619 44209083 -51063568 + MLT2B3 LTR ERVL 137 552 -2 3 922 248 314 61 56 chr17 44209624 44209820 -51062831 + MLT1B LTR MaLR 70 266 -124 3 922 831 87 0 0 chr17 44209949 44210075 -51062576 + (CA)n Simple_repeat Simple_repeat 2 127 0 3 922 274 284 46 108 chr17 44210663 44210696 -51061955 + MT2B LTR ERVL 134 255 -346 3 922 408 299 0 0 chr17 44210696 44210793 -51061858 + B1F1 SINE Alu 6 102 -47 3 922 537 55 0 0 chr17 44210802 44210875 -51061776 + (CA)n Simple_repeat Simple_repeat 2 74 0 3 922 671 289 135 11 chr17 44211291 44211662 -51060989 - L1ME2 LINE L1 -185 5979 5563 3 922 1605 114 160 21 chr17 44212130 44212417 -51060234 + ORR1A2 LTR MaLR 1 327 0 3 922 1129 252 26 22 chr17 44212572 44212884 -51059767 - RMER15 LTR ERVL -18 557 245 3 922 205 250 0 0 chr17 44213107 44213159 -51059492 + T-rich Low_complexity Low_complexity 5 56 0 3 922 390 216 0 0 chr17 44213160 44213234 -51059417 - B3A SINE B2 -41 157 84 3 922 1489 220 75 13 chr17 44213239 44213626 -51059025 - MTD LTR MaLR -8 411 1 3 922 767 278 9 14 chr17 44215166 44215381 -51057270 + ID_B1 SINE B4 2 215 -9 3 922 613 164 28 31 chr17 44216871 44217232 -51055419 + (CA)n Simple_repeat Simple_repeat 1 359 0 3 922 252 0 0 0 chr17 44217391 44217419 -51055232 + (TTTG)n Simple_repeat Simple_repeat 4 31 0 4 922 390 42 0 0 chr17 44218668 44218716 -51053935 + (TC)n Simple_repeat Simple_repeat 2 49 0 4 922 268 227 43 57 chr17 44220054 44220124 -51052527 + ID4 SINE ID 3 71 -12 4 922 333 314 61 28 chr17 44220656 44220836 -51051815 + MER5A DNA MER1_type 1 186 -3 4 922 366 23 0 0 chr17 44223069 44223112 -51049539 + (GGA)n Simple_repeat Simple_repeat 3 45 0 4 922 207 88 0 0 chr17 44224279 44224313 -51048338 + (A)n Simple_repeat Simple_repeat 1 34 0 4 922 841 300 24 35 chr17 44225615 44225905 -51046746 + B4 SINE B4 2 288 -4 4 922 538 315 175 15 chr17 44225978 44226378 -51046273 + L1MD1 LINE L1 12 475 -5934 4 922 495 304 121 44 chr17 44226824 44227420 -51045231 + L1MD1 LINE L1 4573 5214 -1192 4 922 214 163 41 0 chr17 44227755 44227804 -51044847 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 4 922 370 231 11 11 chr17 44227862 44227954 -51044697 + L1MD1 LINE L1 5426 5517 -889 4 922 506 280 178 46 chr17 44227969 44228515 -51044136 + L1MD1 LINE L1 5585 6202 -300 4 922 248 292 113 95 chr17 44228655 44228886 -51043765 - MLT1A LTR MaLR -123 251 17 4 922 227 274 114 36 chr17 44229104 44229244 -51043407 - L1M5 LINE L1 -2631 3515 3365 4 922 323 262 213 53 chr17 44229270 44229891 -51042760 - L1M5 LINE L1 -2870 3276 2557 4 922 2989 177 31 7 chr17 44231475 44232079 -51040572 - ORR1B1-int LTR MaLR -889 620 2 4 922 1484 166 108 16 chr17 44232084 44232390 -51040261 - ORR1B1 LTR MaLR -8 386 53 4 922 216 247 176 0 chr17 44235435 44235520 -51037131 - PB1D10 SINE Alu -16 101 2 4 922 400 132 24 0 chr17 44235889 44235972 -51036679 + GA-rich Low_complexity Low_complexity 3 87 0 4 922 242 0 61 0 chr17 44235977 44236010 -51036641 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 4 922 315 0 0 0 chr17 44236114 44236149 -51036502 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 922 397 322 13 7 chr17 44240157 44240310 -51032341 + L1ME1 LINE L1 4926 5079 -1067 4 922 327 261 154 48 chr17 44240345 44240618 -51032033 + L1ME1 LINE L1 5877 6178 -1 4 922 282 56 0 0 chr17 44240865 44240901 -51031750 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 4 922 27 29 0 0 chr17 44242799 44242833 -51029818 + GC_rich Low_complexity Low_complexity 1 34 0 4 922 360 97 0 0 chr17 44244275 44244337 -51028314 + (A)n Simple_repeat Simple_repeat 1 62 0 4 922 40665 29 2 6 chr17 44245719 44251957 -51020694 - L1Md_T LINE L1 0 6582 376 4 922 1205 112 45 0 chr17 44252125 44252304 -51020347 - B2_Mm1a SINE B2 -6 187 1 4 922 26 0 0 0 chr17 44252485 44252511 -51020140 + AT_rich Low_complexity Low_complexity 1 26 0 4 922 537 261 25 55 chr17 44252515 44252714 -51019937 - B3A SINE B2 -1 197 5 4 922 318 357 46 19 chr17 44252908 44253168 -51019483 + MLT1K LTR MaLR 160 426 -169 4 922 1237 41 0 7 chr17 44253835 44253983 -51018668 + B1_Mm SINE Alu 1 147 0 4 922 271 273 90 15 chr17 44254912 44254979 -51017672 + ORR1E LTR MaLR 22 93 -266 4 922 546 200 13 79 chr17 44254984 44255136 -51017515 - URR1B DNA MER1_type -16 209 68 4 922 748 262 76 27 chr17 44255169 44255432 -51017219 + ORR1E LTR MaLR 84 359 0 4 922 195 100 0 0 chr17 44255550 44255580 -51017071 + (TCTG)n Simple_repeat Simple_repeat 1 30 0 4 922 423 0 0 0 chr17 44255580 44255627 -51017024 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 922 683 281 138 37 chr17 44255649 44255805 -51016846 - MLT1B LTR MaLR 0 390 228 4 922 922 245 203 22 chr17 44255805 44256160 -51016491 + MTD LTR MaLR 1 419 0 4 922 683 281 138 37 chr17 44256160 44256357 -51016294 - MLT1B LTR MaLR -163 227 1 4 922 201 74 0 0 chr17 44257314 44257341 -51015310 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 922 441 50 0 0 chr17 44257451 44257511 -51015140 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 922 2223 107 29 50 chr17 44257512 44257894 -51014757 + RMER19A LTR ERVK 364 737 0 4 922 297 0 0 0 chr17 44259469 44259502 -51013149 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 4 922 425 281 0 0 chr17 44259521 44259617 -51013034 - B3A SINE B2 -102 96 1 4 922 500 245 83 14 chr17 44259875 44260020 -51012631 + Lx6 LINE L1 7280 7434 -26 4 922 933 149 0 0 chr17 44260024 44260185 -51012466 + (GAA)n Simple_repeat Simple_repeat 1 161 0 4 922 516 32 0 0 chr17 44260200 44260262 -51012389 + (CTA)n Simple_repeat Simple_repeat 3 64 0 4 922 800 256 54 0 chr17 44260264 44260467 -51012184 + B3 SINE B2 2 215 -1 4 922 651 261 9 88 chr17 44260600 44260827 -51011824 + B3A SINE B2 2 210 -6 4 922 544 292 65 26 chr17 44261209 44261441 -51011210 + B4A SINE B4 43 283 -9 4 922 280 246 246 0 chr17 44261899 44262013 -51010638 - L1M5 LINE L1 -396 5768 5627 4 922 968 160 144 5 chr17 44262108 44262303 -51010348 + URR1A DNA MER1_type 2 223 -3 4 922 855 238 46 115 chr17 44262506 44262896 -51009755 + MTE2a LTR MaLR 3 365 -14 4 922 295 311 10 0 chr17 44262983 44263082 -51009569 + MER5A DNA MER1_type 16 115 -74 4 922 289 240 26 26 chr17 44263483 44263560 -51009091 + L1MA9 LINE L1 5504 5580 -603 4 922 1296 116 10 5 chr17 44263560 44263768 -51008883 + Lx LINE L1 6442 6650 -4 4 922 477 0 0 0 chr17 44263783 44263836 -51008815 + (TAGA)n Simple_repeat Simple_repeat 1 53 0 4 922 657 296 44 9 chr17 44264034 44264259 -51008392 + RMER15 LTR ERVL 275 507 -68 4 922 429 226 1 12 chr17 44264324 44264439 -51008212 + L1MA9 LINE L1 5681 5794 -650 4 922 377 51 0 33 chr17 44264484 44264545 -51008106 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 4 922 594 39 0 0 chr17 44264557 44264635 -51008016 - B1_Mm SINE Alu -6 141 64 4 922 515 303 36 22 chr17 44264643 44264866 -51007785 + L1MA9 LINE L1 5812 6037 -275 4 922 985 232 102 108 chr17 44264891 44265084 -51007567 + ORR1D2 LTR MaLR 1 202 -168 4 922 7359 73 8 7 chr17 44265084 44266075 -51006576 + Lx3_Mus LINE L1 6005 6996 -13 4 922 342 0 0 0 chr17 44266078 44266116 -51006535 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 4 922 985 232 102 108 chr17 44266116 44266290 -51006361 + ORR1D2 LTR MaLR 203 370 0 4 922 438 296 135 52 chr17 44266296 44266563 -51006088 + MTEa LTR MaLR 1 289 -90 4 922 278 265 29 0 chr17 44266599 44266667 -51005984 + RMER30 DNA MER1_type 132 201 -1 4 922 398 245 0 0 chr17 44266750 44266852 -51005799 + L1MA9 LINE L1 6059 6160 -131 4 922 351 0 0 0 chr17 44266890 44266929 -51005722 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 922 226 67 0 0 chr17 44266930 44266960 -51005691 + L1MA8 LINE L1 6240 6269 -22 4 922 293 271 164 98 chr17 44266985 44267196 -51005455 + B4A SINE B4 1 223 -69 4 922 450 0 0 0 chr17 44267196 44267246 -51005405 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 4 922 293 271 164 98 chr17 44267246 44267308 -51005343 + B4A SINE B4 224 291 -1 4 922 180 111 0 0 chr17 44267328 44267355 -51005296 + (CATA)n Simple_repeat Simple_repeat 1 27 0 4 922 504 0 0 0 chr17 44267815 44267871 -51004780 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 922 196 289 124 26 chr17 44268298 44268451 -51004200 - MIRb SINE MIR -48 220 53 4 922 604 318 31 37 chr17 44268538 44268832 -51003819 + B4A SINE B4 1 292 0 4 922 267 293 21 28 chr17 44268838 44269043 -51003608 + (CATA)n Simple_repeat Simple_repeat 1 203 0 4 922 771 137 68 8 chr17 44269523 44269655 -51002996 + B1_Mus1 SINE Alu 1 140 -8 4 922 226 125 250 0 chr17 44270255 44270319 -51002332 + ORR1D2 LTR MaLR 6 85 -285 4 922 879 275 44 64 chr17 44270321 44270616 -51002035 + B4A SINE B4 2 290 -2 4 922 507 33 0 0 chr17 44270668 44270729 -51001922 + (CA)n Simple_repeat Simple_repeat 1 61 0 4 922 429 20 0 0 chr17 44270732 44270782 -51001869 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 922 236 208 0 20 chr17 44272931 44272943 -50999708 + T-rich Low_complexity Low_complexity 38 49 0 4 922 609 27 0 0 chr17 44272943 44273018 -50999633 + (TC)n Simple_repeat Simple_repeat 2 76 0 4 922 236 208 0 20 chr17 44273018 44273054 -50999597 + T-rich Low_complexity Low_complexity 2 37 0 4 922 650 327 33 22 chr17 44273447 44273722 -50998929 + B4A SINE B4 3 280 -12 4 922 378 0 0 0 chr17 44273735 44273777 -50998874 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 922 642 262 90 5 chr17 44273831 44274019 -50998632 + ID_B1 SINE B4 2 205 -19 4 922 258 239 99 0 chr17 44275366 44275437 -50997214 - MLT1D LTR MaLR -11 494 417 4 922 405 0 0 0 chr17 44275438 44275483 -50997168 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 922 209 180 0 20 chr17 44275492 44275543 -50997108 + (CATATA)n Simple_repeat Simple_repeat 5 54 0 4 922 315 0 0 0 chr17 44275598 44275633 -50997018 + (TATG)n Simple_repeat Simple_repeat 2 36 0 4 922 281 286 26 0 chr17 44275773 44275850 -50996801 + CT-rich Low_complexity Low_complexity 3 81 0 4 922 239 302 112 20 chr17 44275871 44276023 -50996628 - MLT1D LTR MaLR -461 166 1 4 922 393 22 0 0 chr17 44276271 44276317 -50996334 + (GA)n Simple_repeat Simple_repeat 1 46 0 4 922 794 225 56 25 chr17 44276713 44276909 -50995742 - ID_B1 SINE B4 -12 212 11 4 922 1010 89 25 0 chr17 44277764 44277922 -50994729 + URR1A DNA MER1_type 65 226 0 4 922 617 250 0 0 chr17 44278024 44278156 -50994495 - ID_B1 SINE B4 -2 222 91 4 922 1160 259 166 68 chr17 44278598 44279145 -50993506 - MT2B LTR ERVL 0 601 1 4 922 1320 158 57 73 chr17 44280080 44280380 -50992271 - Lx5 LINE L1 -687 6363 6069 4 922 969 179 159 18 chr17 44280337 44280564 -50992087 + Lx5 LINE L1 6792 7050 0 4 922 289 281 248 0 chr17 44281301 44281454 -50991197 - RMER15 LTR ERVL -7 568 378 4 922 872 152 6 0 chr17 44282432 44282597 -50990054 + (TCTA)n Simple_repeat Simple_repeat 2 167 0 4 922 2599 138 0 0 chr17 44283609 44284001 -50988650 - L1_Mm LINE L1 -641 5242 4851 4 922 338 260 39 0 chr17 44284496 44284600 -50988051 - MER3 DNA MER1_type -8 201 94 4 922 221 228 0 66 chr17 44285153 44285214 -50987437 + B4A SINE B4 89 145 -147 4 922 423 221 31 39 chr17 44285163 44285290 -50987361 + B1F1 SINE Alu 11 136 -13 4 922 325 224 40 0 chr17 44285288 44285364 -50987287 + ID4_ SINE ID 5 83 0 4 922 749 306 77 43 chr17 44285957 44286350 -50986301 + MTD LTR MaLR 9 405 -14 4 922 591 309 6 24 chr17 44286354 44286520 -50986131 + B4 SINE B4 24 186 -106 4 922 475 341 22 0 chr17 44286525 44286660 -50985991 + B4 SINE B4 147 284 -8 4 922 297 310 33 72 chr17 44287544 44287697 -50984954 - RMER15 LTR ERVL -154 421 275 5 922 949 227 35 0 chr17 44287990 44288188 -50984463 - B3 SINE B2 -8 208 4 5 922 537 194 17 17 chr17 44289632 44289805 -50982846 + CT-rich Low_complexity Low_complexity 2 174 0 5 922 192 77 0 0 chr17 44289807 44289833 -50982818 + (CAT)n Simple_repeat Simple_repeat 2 27 0 5 922 431 118 0 13 chr17 44289833 44289910 -50982741 + (TG)n Simple_repeat Simple_repeat 1 76 0 5 922 376 261 232 6 chr17 44289921 44290098 -50982553 - B4A SINE B4 -74 218 2 5 922 380 277 28 103 chr17 44290506 44290651 -50982000 - RSINE1 SINE B4 -30 135 2 5 922 186 118 0 0 chr17 44291429 44291463 -50981188 + (A)n Simple_repeat Simple_repeat 1 34 0 5 922 34 0 0 0 chr17 44291497 44291531 -50981120 + AT_rich Low_complexity Low_complexity 1 34 0 5 922 431 257 80 0 chr17 44291611 44291724 -50980927 + ID_B1 SINE B4 81 202 -22 5 922 234 0 0 0 chr17 44292195 44292221 -50980430 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 922 216 264 0 0 chr17 44292599 44292652 -50979999 + GA-rich Low_complexity Low_complexity 2 54 0 5 922 509 189 0 6 chr17 44292663 44292823 -50979828 + GA-rich Low_complexity Low_complexity 2 160 0 5 922 21 0 0 0 chr17 44292958 44292979 -50979672 + AT_rich Low_complexity Low_complexity 1 21 0 5 922 653 312 14 28 chr17 44292985 44293196 -50979455 - B4A SINE B4 -83 209 2 5 922 396 186 9 142 chr17 44293240 44293353 -50979298 + PB1D9 SINE Alu 22 119 -1 5 922 241 317 97 77 chr17 44295670 44296084 -50976567 - Arthur1B DNA Tip100 -4 1221 800 5 922 783 337 72 32 chr17 44296073 44296450 -50976201 - Arthur1B DNA Tip100 -664 561 170 5 922 439 205 145 0 chr17 44296511 44296628 -50976023 - B4A SINE B4 -12 280 147 5 922 2171 132 30 33 chr17 44296788 44297156 -50975495 + ORR1B2 LTR MaLR 1 367 0 5 922 437 287 17 17 chr17 44297748 44297865 -50974786 + B4A SINE B4 1 117 -175 5 922 265 192 19 0 chr17 44297920 44297972 -50974679 - ORR1B2 LTR MaLR 0 367 315 5 922 351 0 0 0 chr17 44297974 44298013 -50974638 + (TC)n Simple_repeat Simple_repeat 1 39 0 5 922 946 99 0 7 chr17 44298015 44298158 -50974493 - B1_Mus1 SINE Alu -6 142 1 5 922 1283 152 158 11 chr17 44298158 44298437 -50974214 - ORR1B2 LTR MaLR -43 324 5 5 922 22 0 0 0 chr17 44298695 44298717 -50973934 + AT_rich Low_complexity Low_complexity 1 22 0 5 922 229 253 0 121 chr17 44298781 44298880 -50973771 + B4A SINE B4 204 290 -2 5 922 261 0 0 0 chr17 44299744 44299773 -50972878 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 5 922 259 234 47 0 chr17 44300229 44300293 -50972358 + B4A SINE B4 164 230 -62 5 922 347 281 161 5 chr17 44300318 44300504 -50972147 + Lx9 LINE L1 7406 7620 -24 5 922 26 0 0 0 chr17 44300527 44300553 -50972098 + AT_rich Low_complexity Low_complexity 1 26 0 5 922 207 214 0 0 chr17 44300553 44300595 -50972056 + A-rich Low_complexity Low_complexity 1 42 0 5 922 710 268 121 63 chr17 44300697 44301012 -50971639 + MTE2b LTR MaLR 66 375 -44 5 922 882 264 33 0 chr17 44301021 44301233 -50971418 - MTEa LTR MaLR -160 219 1 5 922 222 324 42 42 chr17 44301830 44301972 -50970679 + MIRb SINE MIR 80 221 -47 5 115 365 298 24 154 chr17 44302206 44302416 -50970235 + B4A SINE B4 4 198 -94 5 923 1048 119 6 11 chr17 44302416 44302594 -50970057 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 5 923 365 298 24 154 chr17 44302594 44302713 -50969938 + B4A SINE B4 199 290 -2 5 923 427 310 44 50 chr17 44303441 44303621 -50969030 - B3 SINE B2 -8 208 30 5 923 4562 60 1 2 chr17 44303621 44304371 -50968280 - L1_Mus1 LINE L1 -532 6035 5286 5 923 1051 69 7 14 chr17 44304371 44304547 -50968104 + L1_Mus1 LINE L1 6421 6567 0 5 923 216 205 0 0 chr17 44304550 44304589 -50968062 - B3A SINE B2 -159 39 1 5 923 1602 243 40 67 chr17 44304643 44305164 -50967487 - RMER19C LTR ERVK -4 607 101 5 923 195 271 68 54 chr17 44305559 44305633 -50967018 - MIR SINE MIR -70 192 118 5 923 1945 172 23 71 chr17 44305636 44305753 -50966898 + MTD LTR MaLR 3 112 -307 5 923 1304 87 66 0 chr17 44305753 44305936 -50966715 - B2_Mm2 SINE B2 0 195 1 5 923 1945 172 23 71 chr17 44305936 44306255 -50966396 + MTD LTR MaLR 113 418 -1 5 923 279 79 0 0 chr17 44306413 44306451 -50966200 + (CAT)n Simple_repeat Simple_repeat 2 39 0 5 923 255 61 0 0 chr17 44307117 44307150 -50965501 + (TAA)n Simple_repeat Simple_repeat 3 35 0 5 923 327 49 0 0 chr17 44307150 44307191 -50965460 + (TTA)n Simple_repeat Simple_repeat 3 43 0 5 923 569 311 142 32 chr17 44307278 44307589 -50965062 - Lx8 LINE L1 -2 7471 7127 5 923 244 254 0 0 chr17 44307812 44307871 -50964780 - ID SINE ID -165 59 1 5 923 515 279 34 41 chr17 44307904 44308086 -50964565 - B3A SINE B2 0 198 18 5 923 189 132 0 0 chr17 44308433 44308471 -50964180 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 923 628 286 13 0 chr17 44308484 44308638 -50964013 - RSINE1 SINE B4 -6 159 4 5 923 219 69 0 0 chr17 44308875 44308904 -50963747 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 923 481 237 13 97 chr17 44309000 44309154 -50963497 - B3A SINE B2 0 198 58 5 923 584 251 49 99 chr17 44309158 44309401 -50963250 - B4A SINE B4 -59 233 3 5 923 234 0 0 0 chr17 44309466 44309492 -50963159 + (T)n Simple_repeat Simple_repeat 1 26 0 5 923 184 341 7 77 chr17 44311211 44311354 -50961297 + MIRc SINE MIR 61 193 -75 5 923 447 307 11 2 chr17 44311436 44311570 -50961081 + B3A SINE B2 47 187 -29 5 923 1334 214 101 18 chr17 44311570 44311908 -50960743 - ORR1D2 LTR MaLR -3 367 2 5 923 385 327 57 13 chr17 44311908 44311931 -50960720 + B3 SINE B2 188 210 -6 5 923 312 253 82 53 chr17 44311939 44312145 -50960506 + L1MC2 LINE L1 6093 6322 -22 5 923 306 0 0 0 chr17 44312343 44312377 -50960274 + (CTTG)n Simple_repeat Simple_repeat 2 35 0 5 923 792 234 60 5 chr17 44312381 44312566 -50960085 - B3A SINE B2 -3 195 1 5 923 246 62 0 0 chr17 44313271 44313303 -50959348 + (TC)n Simple_repeat Simple_repeat 1 32 0 5 923 221 353 39 77 chr17 44313354 44313535 -50959116 - B4A SINE B4 -24 268 95 5 923 276 185 50 44 chr17 44315028 44315121 -50957530 - MIRc SINE MIR -25 183 88 5 923 225 83 0 0 chr17 44315608 44315644 -50957007 + (A)n Simple_repeat Simple_repeat 1 36 0 5 923 287 25 25 0 chr17 44315657 44315697 -50956954 + (CAA)n Simple_repeat Simple_repeat 2 42 0 5 923 347 352 115 0 chr17 44316181 44316363 -50956288 + MIRb SINE MIR 63 265 -3 5 923 441 0 0 0 chr17 44316363 44316412 -50956239 + (TTA)n Simple_repeat Simple_repeat 3 51 0 5 923 2274 86 76 0 chr17 44316659 44316963 -50955688 + ORR1A2 LTR MaLR 1 327 0 5 923 306 303 11 0 chr17 44316963 44317052 -50955599 + ID_B1 SINE B4 122 211 -13 5 923 351 0 0 0 chr17 44317052 44317091 -50955560 + (CTAA)n Simple_repeat Simple_repeat 1 39 0 5 923 570 319 47 27 chr17 44317167 44317467 -50955184 + MTE-int LTR MaLR 14 319 -1261 5 923 471 288 39 17 chr17 44317555 44317735 -50954916 + MTE-int LTR MaLR 1196 1379 -201 5 923 651 299 93 38 chr17 44317886 44318122 -50954529 - B4 SINE B4 -42 250 2 5 923 413 279 135 55 chr17 44318194 44318642 -50954009 - L1MD3 LINE L1 -1867 6128 5648 5 923 254 143 0 20 chr17 44319145 44319195 -50953456 + T-rich Low_complexity Low_complexity 2 50 0 5 923 1790 204 33 106 chr17 44319233 44319554 -50953097 - Lx2B LINE L1 -116 6884 6602 5 923 2933 127 7 7 chr17 44319554 44319990 -50952661 - RLTR10C LTR ERVK 0 436 1 5 923 1790 204 33 106 chr17 44319990 44320177 -50952474 - Lx2B LINE L1 -399 6601 6413 5 923 270 250 0 0 chr17 44320264 44320336 -50952315 + T-rich Low_complexity Low_complexity 1 72 0 5 923 21 0 0 0 chr17 44320396 44320417 -50952234 + AT_rich Low_complexity Low_complexity 1 21 0 5 923 265 229 33 0 chr17 44320435 44320496 -50952155 - L1MC LINE L1 -3412 2734 2672 5 923 350 281 70 87 chr17 44320548 44320790 -50951861 - L1MEf LINE L1 -3756 2390 2153 5 923 334 281 42 0 chr17 44320856 44320952 -50951699 - B3 SINE B2 -113 103 4 5 923 640 235 14 129 chr17 44320967 44321177 -50951474 - B3A SINE B2 -8 187 2 5 923 261 309 61 20 chr17 44321224 44321422 -50951229 - L1MEf LINE L1 -4290 1952 1747 5 923 507 190 130 0 chr17 44321791 44321891 -50950760 + B3A SINE B2 1 113 -85 5 923 582 15 0 0 chr17 44321918 44321985 -50950666 + (TC)n Simple_repeat Simple_repeat 2 68 0 5 923 210 91 0 0 chr17 44321986 44322019 -50950632 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 923 323 257 28 28 chr17 44322758 44322866 -50949785 - MLT1A1 LTR MaLR 0 408 301 5 923 1389 191 13 189 chr17 44322987 44323438 -50949213 + ORR1D1 LTR MaLR 3 374 0 5 923 253 342 9 27 chr17 44323765 44323876 -50948775 + MIR SINE MIR 43 151 -111 5 923 266 262 69 28 chr17 44323950 44324095 -50948556 - B4A SINE B4 -140 152 2 5 923 713 210 12 0 chr17 44324503 44324670 -50947981 + GA-rich Low_complexity Low_complexity 4 172 0 5 923 433 282 16 64 chr17 44324670 44324795 -50947856 + ID_B1 SINE B4 80 198 -26 5 923 519 31 0 0 chr17 44324799 44324864 -50947787 + (TC)n Simple_repeat Simple_repeat 2 66 0 5 923 501 129 0 0 chr17 44324865 44324958 -50947693 + (CAGAGA)n Simple_repeat Simple_repeat 2 94 0 5 923 314 306 0 0 chr17 44324958 44325043 -50947608 + GA-rich Low_complexity Low_complexity 3 87 0 5 923 29 28 0 0 chr17 44325265 44325301 -50947350 + AT_rich Low_complexity Low_complexity 1 36 0 5 923 696 127 0 0 chr17 44326284 44326394 -50946257 + (GA)n Simple_repeat Simple_repeat 1 110 0 5 923 459 0 0 0 chr17 44327137 44327188 -50945463 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 923 899 137 0 0 chr17 44327833 44327972 -50944679 + B1_Mus1 SINE Alu 1 139 -9 5 923 1604 256 8 32 chr17 44328821 44329193 -50943458 - RMER1B Other Other -703 363 1 5 923 447 19 0 0 chr17 44329306 44329358 -50943293 + (TGG)n Simple_repeat Simple_repeat 3 54 0 5 923 370 315 121 15 chr17 44329481 44329613 -50943038 - ID_B1 SINE B4 -78 146 1 5 923 216 0 0 0 chr17 44329645 44329669 -50942982 + (T)n Simple_repeat Simple_repeat 1 24 0 6 923 222 294 58 52 chr17 44330420 44330574 -50942077 + MER5B DNA MER1_type 5 159 -19 6 923 642 282 150 20 chr17 44331086 44331339 -50941312 - B4A SINE B4 -4 288 3 6 923 2206 194 22 7 chr17 44331433 44331838 -50940813 - Lx6 LINE L1 -629 6831 6421 6 923 2580 183 82 20 chr17 44331839 44332974 -50939677 - Lx6 LINE L1 -1382 6078 4878 6 923 6582 157 28 132 chr17 44332980 44333740 -50938911 - Lx6 LINE L1 -3070 2810 2058 6 923 396 0 0 0 chr17 44333740 44333784 -50938867 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 923 6582 161 24 127 chr17 44333784 44335092 -50937559 - Lx6 LINE L1 -3823 2057 971 6 923 486 299 80 9 chr17 44335070 44335296 -50937355 - Lx6 LINE L1 -7189 539 298 6 923 281 185 15 0 chr17 44335639 44335704 -50936947 + CT-rich Low_complexity Low_complexity 3 68 0 6 923 774 22 0 0 chr17 44336552 44336644 -50936007 + (GA)n Simple_repeat Simple_repeat 2 93 0 6 923 522 291 43 26 chr17 44338801 44339091 -50933560 - MLT1A0 LTR MaLR -20 447 1 6 923 627 277 58 19 chr17 44339820 44340026 -50932625 - ID_B1 SINE B4 -5 219 6 6 923 850 285 60 77 chr17 44340836 44341201 -50931450 - MTE2a LTR MaLR -18 361 3 6 923 448 321 12 64 chr17 44341615 44341788 -50930863 - MER58A DNA MER1_type -3 221 58 6 923 516 32 0 0 chr17 44342329 44342391 -50930260 + (CA)n Simple_repeat Simple_repeat 1 62 0 6 923 191 288 68 14 chr17 44342587 44342661 -50929990 + MIRb SINE MIR 73 150 -118 6 923 525 16 0 0 chr17 44344814 44344876 -50927775 + (TG)n Simple_repeat Simple_repeat 2 63 0 6 923 2977 209 63 37 chr17 44345142 44345933 -50926718 - RLTR40 LTR ERVK -5 812 1 6 923 990 205 24 9 chr17 44345949 44346161 -50926490 - B3 SINE B2 -1 215 1 6 923 360 167 0 0 chr17 44346707 44346761 -50925890 + polypyrimidine Low_complexity Low_complexity 1 54 0 6 923 693 285 154 32 chr17 44347435 44347566 -50925085 - Lx9 LINE L1 -20 7624 7494 6 923 423 0 0 0 chr17 44347566 44347613 -50925038 + (TG)n Simple_repeat Simple_repeat 1 47 0 6 923 693 285 154 32 chr17 44347613 44347923 -50924728 - Lx9 LINE L1 -151 7493 7129 6 923 257 218 13 0 chr17 44347961 44348039 -50924612 + (TG)n Simple_repeat Simple_repeat 2 80 0 6 923 602 13 13 0 chr17 44348051 44348126 -50924525 + (TCTA)n Simple_repeat Simple_repeat 4 79 0 6 923 202 300 33 22 chr17 44348126 44348218 -50924433 + (TATATG)n Simple_repeat Simple_repeat 3 95 0 6 923 514 265 96 32 chr17 44348218 44348405 -50924246 - B4A SINE B4 0 292 94 6 923 652 248 0 7 chr17 44348888 44349034 -50923617 + B3A SINE B2 1 145 -53 6 923 459 0 0 0 chr17 44349036 44349087 -50923564 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 923 406 176 17 61 chr17 44349264 44349379 -50923272 + MLT1A1 LTR MaLR 299 408 0 6 923 542 265 8 0 chr17 44349786 44349903 -50922748 - RSINE1 SINE B4 -43 122 5 6 923 627 264 14 0 chr17 44351618 44351762 -50920889 + RMER15-int LTR ERVL 4479 4624 -375 6 923 510 315 152 14 chr17 44351762 44352052 -50920599 + MLT-int LTR MaLR 1391 1720 -15 6 923 842 272 84 34 chr17 44352925 44353096 -50919555 - MTEb LTR MaLR -4 375 197 6 923 1217 45 21 0 chr17 44353096 44353339 -50919312 + (TCTA)n Simple_repeat Simple_repeat 1 248 0 6 923 842 272 84 34 chr17 44353339 44353522 -50919129 - MTEb LTR MaLR -183 196 4 6 923 227 359 86 19 chr17 44354083 44354245 -50918406 - LTR33 LTR ERVL -306 209 37 6 923 360 219 23 0 chr17 44355303 44355431 -50917220 + (TA)n Simple_repeat Simple_repeat 2 132 0 6 923 240 149 0 0 chr17 44356052 44356099 -50916552 + (TA)n Simple_repeat Simple_repeat 1 47 0 6 923 701 261 21 16 chr17 44356441 44356629 -50916022 + B3 SINE B2 1 188 -28 6 923 186 43 0 0 chr17 44356629 44356652 -50915999 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 923 448 262 39 101 chr17 44356652 44356671 -50915980 + B2_Mm2 SINE B2 173 195 0 6 923 439 303 8 16 chr17 44357429 44357553 -50915098 + RSINE1 SINE B4 4 126 -39 6 923 707 135 24 0 chr17 44357571 44357697 -50914954 + CT-rich Low_complexity Low_complexity 3 131 0 6 923 25 0 0 0 chr17 44357701 44357726 -50914925 + AT_rich Low_complexity Low_complexity 1 25 0 6 923 642 298 70 22 chr17 44357854 44358039 -50914612 - B4 SINE B4 -15 277 84 6 923 420 20 0 0 chr17 44358278 44358327 -50914324 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 923 729 230 51 46 chr17 44359205 44359401 -50913250 + B3A SINE B2 1 197 -1 6 923 725 239 45 41 chr17 44360225 44360599 -50912052 - MTEb LTR MaLR -6 373 1 6 923 670 207 35 75 chr17 44360859 44361058 -50911593 - Tigger5 DNA MER2_type -60 2346 2156 6 923 194 210 0 31 chr17 44361597 44361661 -50910990 + (CATA)n Simple_repeat Simple_repeat 3 64 0 6 923 851 262 13 35 chr17 44362178 44362407 -50910244 + ID_B1 SINE B4 1 224 0 6 923 534 204 13 13 chr17 44362416 44362565 -50910086 + GA-rich Low_complexity Low_complexity 1 149 0 6 923 1088 59 7 0 chr17 44362653 44362789 -50909862 + B1_Mus1 SINE Alu 2 138 -10 6 923 522 43 0 0 chr17 44362789 44362858 -50909793 + (CAAAA)n Simple_repeat Simple_repeat 2 70 0 6 923 425 255 73 7 chr17 44363874 44364024 -50908627 - MER5A1 DNA MER1_type -5 161 2 6 923 1029 71 49 7 chr17 44364067 44364209 -50908442 + B1_Mus1 SINE Alu 1 148 0 6 923 200 64 85 0 chr17 44364289 44364336 -50908315 + (GGGTG)n Simple_repeat Simple_repeat 4 54 0 6 923 2519 43 0 0 chr17 44364913 44365212 -50907439 + L1Md_T LINE L1 6284 6582 0 6 923 183 80 0 0 chr17 44365234 44365259 -50907392 + (A)n Simple_repeat Simple_repeat 1 25 0 6 923 453 36 0 0 chr17 44365762 44365817 -50906834 + (TA)n Simple_repeat Simple_repeat 2 56 0 6 923 1188 246 123 4 chr17 44365983 44366346 -50906305 + MTD LTR MaLR 18 380 -39 6 923 332 200 11 0 chr17 44366488 44366583 -50906068 + CT-rich Low_complexity Low_complexity 1 96 0 6 923 273 266 0 71 chr17 44366583 44366668 -50905983 - B4 SINE B4 -2 290 212 6 923 183 42 0 0 chr17 44366692 44366716 -50905935 + (T)n Simple_repeat Simple_repeat 1 24 0 6 923 758 274 67 9 chr17 44366716 44366926 -50905725 - B4 SINE B4 -69 223 2 6 923 262 273 25 25 chr17 44367695 44367774 -50904877 - ID4 SINE ID -2 81 3 6 923 486 0 0 0 chr17 44367892 44367946 -50904705 + (CA)n Simple_repeat Simple_repeat 1 54 0 6 923 678 258 76 42 chr17 44367946 44368209 -50904442 - B4A SINE B4 -20 272 1 6 923 462 255 0 0 chr17 44369477 44369571 -50903080 + B3A SINE B2 3 96 -102 6 923 449 145 0 0 chr17 44370633 44370709 -50901942 + ORR1D2 LTR MaLR 291 366 -4 6 923 305 269 40 46 chr17 44372876 44373009 -50899642 + Lx6 LINE L1 7300 7404 -56 6 923 652 262 22 58 chr17 44373025 44373248 -50899403 + B3A SINE B2 1 215 -1 6 923 547 243 22 14 chr17 44373296 44373434 -50899217 + B3A SINE B2 2 140 -58 6 923 573 15 0 0 chr17 44373435 44373501 -50899150 + (CA)n Simple_repeat Simple_repeat 2 67 0 6 923 222 297 31 0 chr17 44374737 44374801 -50897850 - ID4 SINE ID -6 77 12 6 923 214 128 26 0 chr17 44377067 44377106 -50895545 - ID SINE ID -156 68 29 6 923 252 290 43 11 chr17 44377142 44377236 -50895415 - B1F SINE Alu -8 141 45 6 923 211 303 47 63 chr17 44377236 44377263 -50895388 - ID_B1 SINE B4 -2 203 98 6 923 24 0 0 0 chr17 44377518 44377542 -50895109 + AT_rich Low_complexity Low_complexity 1 24 0 6 923 593 253 12 42 chr17 44377805 44377970 -50894681 - B3 SINE B2 -4 212 53 6 923 392 283 0 34 chr17 44377998 44378115 -50894536 - PB1D7 SINE Alu -7 113 1 6 923 387 0 0 0 chr17 44378461 44378504 -50894147 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 923 623 183 24 6 chr17 44379302 44379467 -50893184 + C-rich Low_complexity Low_complexity 3 170 0 6 923 387 0 0 0 chr17 44379601 44379644 -50893007 + (CATA)n Simple_repeat Simple_repeat 4 46 0 6 923 1256 112 0 21 chr17 44380400 44380592 -50892059 - B2_Mm2 SINE B2 -6 189 2 6 923 552 305 45 41 chr17 44382386 44382677 -50889974 + B4A SINE B4 1 292 0 6 923 259 326 64 0 chr17 44383428 44383569 -50889082 - RMER15 LTR ERVL -1 574 425 6 923 292 302 28 28 chr17 44383775 44383884 -50888767 + B4A SINE B4 40 148 -144 6 923 323 44 22 0 chr17 44384228 44384273 -50888378 + (CAAT)n Simple_repeat Simple_repeat 2 47 0 6 923 372 308 113 51 chr17 44384394 44384668 -50887983 - B4 SINE B4 -1 291 1 6 923 1143 203 122 36 chr17 44386443 44386780 -50885871 - MTEa LTR MaLR -11 368 3 6 923 205 306 30 10 chr17 44386954 44387053 -50885598 - MIRc SINE MIR -31 237 137 6 923 2426 65 19 6 chr17 44387502 44387825 -50884826 + ORR1A2 LTR MaLR 1 327 0 6 923 687 303 79 49 chr17 44387956 44388223 -50884428 - B4 SINE B4 -6 286 12 6 923 727 279 60 46 chr17 44388475 44388757 -50883894 + B4A SINE B4 5 290 -2 6 923 194 290 116 0 chr17 44388806 44388875 -50883776 - L2a LINE L2 -37 3389 3313 6 923 188 281 15 15 chr17 44389060 44389125 -50883526 + MIRb SINE MIR 193 257 -11 6 923 304 284 13 96 chr17 44389317 44389473 -50883178 - RSINE1 SINE B4 -22 143 1 6 923 837 117 7 14 chr17 44389494 44389642 -50883009 + (TCC)n Simple_repeat Simple_repeat 2 148 0 6 923 489 17 0 0 chr17 44390635 44390693 -50881958 + (TG)n Simple_repeat Simple_repeat 2 59 0 6 923 848 190 0 7 chr17 44390715 44390986 -50881665 + GA-rich Low_complexity Low_complexity 1 268 0 6 923 387 0 0 0 chr17 44392691 44392734 -50879917 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 923 433 348 23 19 chr17 44393248 44393462 -50879189 - MER58B DNA MER1_type -15 326 112 6 923 189 107 0 0 chr17 44395383 44395411 -50877240 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 923 24 0 0 0 chr17 44395561 44395585 -50877066 + AT_rich Low_complexity Low_complexity 1 24 0 6 923 396 263 25 25 chr17 44395585 44395706 -50876945 - Lx9 LINE L1 -303 7341 7221 6 923 327 330 169 31 chr17 44396971 44397196 -50875455 - B4A SINE B4 -36 256 1 7 923 1065 96 0 7 chr17 44397861 44398008 -50874643 + B1_Mus2 SINE Alu 1 146 -1 7 923 723 232 130 42 chr17 44398042 44398280 -50874371 + B4A SINE B4 2 260 -32 7 923 396 0 0 0 chr17 44398852 44398896 -50873755 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 923 870 141 11 11 chr17 44398996 44399176 -50873475 + CT-rich Low_complexity Low_complexity 1 180 0 7 923 180 0 0 0 chr17 44399178 44399198 -50873453 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 7 923 212 93 47 0 chr17 44401934 44401977 -50870674 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 7 923 509 274 129 28 chr17 44401981 44402229 -50870422 - B4A SINE B4 -19 273 1 7 923 1151 135 74 42 chr17 44402483 44402700 -50869951 + URR1A DNA MER1_type 1 224 -2 7 923 298 342 79 35 chr17 44402901 44403128 -50869523 + LTR81C LTR ERV1? 833 1069 -84 7 923 830 263 25 0 chr17 44403553 44403751 -50868900 - B3 SINE B2 -5 211 9 7 923 366 23 0 0 chr17 44403796 44403839 -50868812 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 923 333 288 31 42 chr17 44404868 44405000 -50867651 + ID_B1 SINE B4 78 205 -19 7 923 242 333 34 114 chr17 44404885 44405034 -50867617 + B1F SINE Alu 7 143 -6 7 923 470 236 288 19 chr17 44406064 44406224 -50866427 + MTE2a LTR MaLR 78 280 -99 7 923 485 274 67 0 chr17 44407135 44407270 -50865381 - B3A SINE B2 -54 144 1 7 923 327 327 17 17 chr17 44408130 44408245 -50864406 + MIR3 SINE MIR 40 154 -54 7 923 1326 211 174 17 chr17 44408954 44409316 -50863335 - MTD LTR MaLR 0 419 1 7 923 222 37 0 0 chr17 44410328 44410355 -50862296 + (CAGA)n Simple_repeat Simple_repeat 4 30 0 7 923 669 110 9 0 chr17 44411045 44411154 -50861497 - URR1B DNA MER1_type 0 225 116 7 923 185 258 91 0 chr17 44411286 44411352 -50861299 + MIRb SINE MIR 119 190 -78 7 923 235 331 38 15 chr17 44411878 44412010 -50860641 - MER45A DNA Tip100 -14 164 30 7 923 441 0 0 0 chr17 44413129 44413178 -50859473 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 923 710 241 131 0 chr17 44416601 44416792 -50855859 + ID_B1 SINE B4 9 224 0 7 923 26 0 0 0 chr17 44416841 44416867 -50855784 + AT_rich Low_complexity Low_complexity 1 26 0 7 923 21 0 0 0 chr17 44417175 44417196 -50855455 + AT_rich Low_complexity Low_complexity 1 21 0 7 923 362 223 0 8 chr17 44417361 44417483 -50855168 + GA-rich Low_complexity Low_complexity 1 121 0 7 923 216 0 0 0 chr17 44417567 44417591 -50855060 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 7 923 582 15 0 0 chr17 44418283 44418350 -50854301 + (TC)n Simple_repeat Simple_repeat 2 68 0 7 923 702 283 81 16 chr17 44418777 44419025 -50853626 + ORR1E LTR MaLR 77 340 -19 7 923 580 259 109 47 chr17 44419228 44419439 -50853212 - B4A SINE B4 -35 257 34 7 923 902 204 266 58 chr17 44419451 44419907 -50852744 + RLTR20C LTR ERVK 1 551 0 7 923 246 327 27 9 chr17 44420412 44420523 -50852128 + B3A SINE B2 48 160 -38 7 923 341 289 52 31 chr17 44420887 44421203 -50851448 - L1_Mur3 LINE L1 -385 5739 5383 7 923 1106 88 59 0 chr17 44421220 44421390 -50851261 - B2_Mm2 SINE B2 -1 194 15 7 923 274 208 170 0 chr17 44422384 44422490 -50850161 + CR1_Mam LINE CR1 243 366 -1838 7 923 380 247 56 0 chr17 44422492 44422581 -50850070 + CR1_Mam LINE CR1 590 683 -1521 7 923 824 200 312 60 chr17 44423421 44423703 -50848948 + ORR1E LTR MaLR 3 355 -4 7 923 816 255 69 9 chr17 44424034 44424267 -50848384 - RMER15 LTR ERVL -54 521 275 7 923 315 308 67 30 chr17 44424274 44424408 -50848243 - RMER15 LTR ERVL -436 139 1 7 923 21 0 0 0 chr17 44424489 44424510 -50848141 + AT_rich Low_complexity Low_complexity 1 21 0 7 923 4317 135 51 11 chr17 44424540 44425267 -50847384 - RMER6A LTR ERVK 0 756 1 7 923 371 340 9 0 chr17 44425449 44425555 -50847096 - B3 SINE B2 -23 193 87 7 923 240 163 0 0 chr17 44425874 44425917 -50846734 + (CATATA)n Simple_repeat Simple_repeat 2 44 0 7 923 871 265 5 19 chr17 44426074 44426289 -50846362 + B3 SINE B2 1 212 -4 7 923 375 269 9 9 chr17 44426377 44426486 -50846165 + MLT1A0 LTR MaLR 257 365 0 7 923 1149 258 24 118 chr17 44426632 44427049 -50845602 - MTE2b LTR MaLR -1 378 1 7 923 414 0 0 0 chr17 44427392 44427438 -50845213 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 923 234 81 0 0 chr17 44427441 44427478 -50845173 + (GA)n Simple_repeat Simple_repeat 1 37 0 7 923 332 296 153 21 chr17 44427600 44427835 -50844816 + MLT1C LTR MaLR 202 467 0 7 923 504 0 0 0 chr17 44428341 44428397 -50844254 + (TAA)n Simple_repeat Simple_repeat 2 57 0 7 923 2697 147 47 18 chr17 44428408 44428921 -50843730 - RLTR31_Mm LTR ERVK -33 528 1 7 923 315 164 0 0 chr17 44429311 44429372 -50843279 + (TGG)n Simple_repeat Simple_repeat 2 62 0 7 923 1794 206 60 11 chr17 44429412 44429776 -50842875 + RLTR14 LTR ERV1 1 382 0 7 923 25 0 0 0 chr17 44429856 44429881 -50842770 + AT_rich Low_complexity Low_complexity 1 25 0 7 923 1232 142 52 5 chr17 44429929 44430141 -50842510 - Lx2 LINE L1 -1 6996 6775 7 923 3026 125 40 13 chr17 44430141 44430809 -50841842 - Lx2 LINE L1 -355 6642 5633 7 923 2762 79 0 2 chr17 44430810 44431205 -50841446 - Lx2 LINE L1 -2297 1617 1224 7 923 1343 59 10 61 chr17 44431250 44431448 -50841203 + B2_Mm2 SINE B2 2 189 -6 7 923 901 236 102 12 chr17 44432616 44432860 -50839791 - MTD LTR MaLR -15 404 139 7 923 1518 212 102 29 chr17 44432860 44433243 -50839408 + MTC LTR MaLR 1 411 -10 7 923 477 211 64 25 chr17 44433234 44433372 -50839279 - MTD LTR MaLR -271 148 11 7 924 23 33 0 0 chr17 44434677 44434707 -50837944 + AT_rich Low_complexity Low_complexity 1 30 0 7 924 489 244 26 9 chr17 44434841 44434957 -50837694 - B4A SINE B4 -173 119 2 7 924 364 263 17 0 chr17 44435158 44435276 -50837375 - MER121 Unknown Unknown -178 234 115 7 924 231 229 0 0 chr17 44435395 44435456 -50837195 + (TATATG)n Simple_repeat Simple_repeat 5 65 0 7 924 229 251 0 51 chr17 44435534 44435710 -50836941 + (TATATG)n Simple_repeat Simple_repeat 1 167 0 7 924 300 233 22 104 chr17 44435714 44435896 -50836755 + RLTR21 LTR ERVK 1087 1253 -319 7 924 346 371 0 22 chr17 44435906 44436085 -50836566 + (TATATG)n Simple_repeat Simple_repeat 4 178 0 7 924 239 250 23 0 chr17 44436104 44436192 -50836459 + (TATATG)n Simple_repeat Simple_repeat 1 90 0 7 924 379 368 6 0 chr17 44436196 44436370 -50836281 + (CATA)n Simple_repeat Simple_repeat 1 175 0 7 924 392 348 6 12 chr17 44436412 44436634 -50836017 + (CATATA)n Simple_repeat Simple_repeat 1 220 0 7 924 24 0 0 0 chr17 44437533 44437557 -50835094 + AT_rich Low_complexity Low_complexity 1 24 0 7 924 341 277 35 9 chr17 44438465 44438578 -50834073 - MTEb LTR MaLR 0 379 264 7 924 1263 94 0 0 chr17 44438725 44438905 -50833746 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 7 924 250 303 55 47 chr17 44438918 44439174 -50833477 + RMER17C LTR ERVK 84 341 -69 7 924 821 227 119 0 chr17 44439227 44439421 -50833230 - MTEb LTR MaLR -162 217 1 7 924 1136 13 27 0 chr17 44439517 44439667 -50832984 + (TAGA)n Simple_repeat Simple_repeat 2 155 0 7 924 203 256 0 49 chr17 44439782 44439864 -50832787 + (CATATA)n Simple_repeat Simple_repeat 5 82 0 7 924 381 117 46 33 chr17 44440465 44440616 -50832035 + (TAGA)n Simple_repeat Simple_repeat 3 155 0 7 924 892 81 34 23 chr17 44440671 44440847 -50831804 + (TAGA)n Simple_repeat Simple_repeat 1 178 0 7 924 259 207 4 8 chr17 44440936 44441006 -50831645 + MIR SINE MIR 30 99 -109 7 924 1173 55 0 7 chr17 44441847 44441993 -50830658 + B1_Mus1 SINE Alu 3 147 -1 7 924 231 61 0 0 chr17 44441994 44442027 -50830624 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 7 924 546 276 56 56 chr17 44442187 44442348 -50830303 + RSINE1 SINE B4 3 163 -2 7 924 198 103 0 0 chr17 44442391 44442420 -50830231 + (GA)n Simple_repeat Simple_repeat 1 29 0 7 924 498 46 0 0 chr17 44442552 44442617 -50830034 + (CA)n Simple_repeat Simple_repeat 1 65 0 7 924 252 0 0 0 chr17 44442762 44442790 -50829861 + (CAA)n Simple_repeat Simple_repeat 3 30 0 7 924 219 114 0 0 chr17 44442790 44442825 -50829826 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 7 924 815 131 7 0 chr17 44442832 44442969 -50829682 + (GGAA)n Simple_repeat Simple_repeat 3 140 0 7 924 702 252 44 25 chr17 44442975 44443186 -50829465 + MTEa LTR MaLR 169 373 -1 7 924 286 275 27 0 chr17 44443305 44443395 -50829256 + MIRc SINE MIR 82 173 -89 7 924 794 288 148 0 chr17 44443804 44444068 -50828583 - MTEa LTR MaLR -74 305 3 7 924 596 240 31 68 chr17 44446240 44446401 -50826250 + RMER5 LTR ERV1 1 155 -379 7 924 348 155 0 0 chr17 44446672 44446743 -50825908 + GA-rich Low_complexity Low_complexity 2 72 0 7 924 239 260 0 0 chr17 44447247 44447297 -50825354 + CT-rich Low_complexity Low_complexity 3 52 0 7 924 495 122 0 0 chr17 44447622 44447712 -50824939 + (TC)n Simple_repeat Simple_repeat 1 90 0 7 924 403 158 31 21 chr17 44448295 44448392 -50824259 + (CATATA)n Simple_repeat Simple_repeat 3 100 0 7 924 477 0 0 0 chr17 44448574 44448627 -50824024 + (TTC)n Simple_repeat Simple_repeat 3 55 0 7 924 621 0 0 0 chr17 44448627 44448696 -50823955 + (TC)n Simple_repeat Simple_repeat 2 70 0 7 924 810 318 32 18 chr17 44449310 44449589 -50823062 - B4A SINE B4 -8 284 2 7 924 1857 151 11 39 chr17 44450006 44450370 -50822281 + ORR1B1 LTR MaLR 41 394 0 7 924 220 211 28 0 chr17 44451377 44451448 -50821203 + GA-rich Low_complexity Low_complexity 5 77 0 7 924 22 0 0 0 chr17 44451612 44451634 -50821017 + AT_rich Low_complexity Low_complexity 1 22 0 7 924 537 30 0 0 chr17 44452272 44452339 -50820312 + (CA)n Simple_repeat Simple_repeat 2 68 0 7 924 958 205 15 30 chr17 44452557 44452758 -50819893 - B3A SINE B2 0 198 1 7 924 680 179 8 0 chr17 44453169 44453286 -50819365 + PB1D9 SINE Alu 2 119 -1 7 924 310 320 61 23 chr17 44453376 44453507 -50819144 - ORR1E LTR MaLR -223 136 1 7 924 819 280 55 12 chr17 44455434 44455691 -50816960 - B4A SINE B4 -18 274 7 8 924 516 258 109 35 chr17 44455773 44455974 -50816677 + B3 SINE B2 1 216 0 8 924 224 296 25 0 chr17 44456166 44456325 -50816326 + (CA)n Simple_repeat Simple_repeat 2 164 0 8 924 471 249 18 0 chr17 44456341 44456510 -50816141 + (CA)n Simple_repeat Simple_repeat 1 172 0 8 924 281 314 19 9 chr17 44456510 44456616 -50816035 + (CATA)n Simple_repeat Simple_repeat 3 109 0 8 924 405 347 0 24 chr17 44456694 44456821 -50815830 + RSINE1 SINE B4 14 137 -28 8 924 433 74 0 0 chr17 44456887 44456941 -50815710 - L1_Mus3 LINE L1 -717 5921 5868 8 924 4373 98 24 10 chr17 44456941 44457569 -50815082 + L1_Mus3 LINE L1 5990 6626 -12 8 924 614 236 6 0 chr17 44457569 44457734 -50814917 + (TA)n Simple_repeat Simple_repeat 1 166 0 8 924 1607 242 71 10 chr17 44459281 44459493 -50813158 - MTD LTR MaLR -1 418 200 8 924 272 48 24 0 chr17 44459493 44459535 -50813116 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 8 924 1607 242 71 10 chr17 44459535 44459715 -50812936 - MTD LTR MaLR -220 199 2 8 924 964 243 59 8 chr17 44460714 44460967 -50811684 - B4 SINE B4 -6 286 21 8 924 264 326 119 19 chr17 44461143 44461412 -50811239 + MLT1L LTR MaLR 151 446 -164 8 924 358 277 101 14 chr17 44461454 44461482 -50811169 - MTEa LTR MaLR -3 376 349 8 924 741 65 0 0 chr17 44461482 44461590 -50811061 + (CAAAC)n Simple_repeat Simple_repeat 2 109 0 8 924 358 277 101 14 chr17 44461590 44461700 -50810951 - MTEa LTR MaLR -31 348 227 8 924 318 106 0 0 chr17 44461749 44461796 -50810855 + (GGGA)n Simple_repeat Simple_repeat 1 47 0 8 924 347 309 94 8 chr17 44461796 44461923 -50810728 - MTEa LTR MaLR -164 215 78 8 924 206 295 13 0 chr17 44462150 44462228 -50810423 + (TATATG)n Simple_repeat Simple_repeat 3 81 0 8 924 561 327 0 24 chr17 44463071 44463240 -50809411 - B3A SINE B2 -33 165 1 8 924 507 78 0 0 chr17 44463252 44463329 -50809322 + (CA)n Simple_repeat Simple_repeat 2 78 0 8 924 244 253 37 25 chr17 44463775 44463856 -50808795 + GA-rich Low_complexity Low_complexity 3 84 0 8 924 1827 74 218 4 chr17 44463926 44464197 -50808454 - ORR1A4 LTR MaLR 0 329 1 8 924 455 160 0 11 chr17 44464199 44464294 -50808357 + GA-rich Low_complexity Low_complexity 4 97 0 8 924 180 0 0 0 chr17 44464504 44464524 -50808127 + (T)n Simple_repeat Simple_repeat 1 20 0 8 924 368 267 28 189 chr17 44465834 44466088 -50806563 - B3 SINE B2 -1 215 3 8 924 270 56 0 0 chr17 44466096 44466132 -50806519 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 8 924 4348 103 20 17 chr17 44466221 44466861 -50805790 - Lx2 LINE L1 0 6997 6356 8 924 5417 100 22 10 chr17 44466861 44467668 -50804983 + Lx2 LINE L1 5553 6369 -628 8 924 426 39 0 0 chr17 44468456 44468508 -50804143 + (CA)n Simple_repeat Simple_repeat 2 53 0 8 924 218 85 68 0 chr17 44468948 44469007 -50803644 + (CAA)n Simple_repeat Simple_repeat 2 64 0 8 924 501 280 36 54 chr17 44469669 44469835 -50802816 - RSINE1 SINE B4 -1 164 2 8 924 260 177 0 31 chr17 44470225 44470289 -50802362 + (CAT)n Simple_repeat Simple_repeat 1 62 0 8 924 324 185 0 84 chr17 44470293 44470364 -50802287 - ID2 SINE ID -5 78 14 8 924 480 322 28 24 chr17 44471057 44471270 -50801381 + B4 SINE B4 6 219 -73 8 924 387 105 0 0 chr17 44471270 44471327 -50801324 + (TGG)n Simple_repeat Simple_repeat 1 57 0 8 924 645 49 0 0 chr17 44471952 44472033 -50800618 + (TC)n Simple_repeat Simple_repeat 2 82 0 8 924 449 285 60 5 chr17 44472587 44472788 -50799863 + B3 SINE B2 1 212 -4 8 924 579 296 70 19 chr17 44472836 44473094 -50799557 + B4A SINE B4 4 274 -18 8 924 691 259 22 0 chr17 44473214 44473369 -50799282 + B3A SINE B2 1 159 -39 8 924 437 50 17 0 chr17 44473369 44473429 -50799222 + (CA)n Simple_repeat Simple_repeat 1 61 0 8 924 691 259 22 0 chr17 44473429 44473458 -50799193 + B3A SINE B2 160 188 -10 8 924 198 0 0 0 chr17 44474089 44474111 -50798540 + (CCA)n Simple_repeat Simple_repeat 3 24 0 8 924 782 291 54 8 chr17 44475444 44475704 -50796947 - Lx8 LINE L1 -146 7327 7056 8 924 367 308 0 0 chr17 44475852 44475943 -50796708 + Lx8 LINE L1 6651 6741 -732 8 924 259 198 50 30 chr17 44475969 44476068 -50796583 + (TG)n Simple_repeat Simple_repeat 2 102 0 8 924 284 195 57 8 chr17 44476081 44476205 -50796446 + (TATG)n Simple_repeat Simple_repeat 4 133 0 8 924 548 210 28 7 chr17 44476251 44476685 -50795966 + (TG)n Simple_repeat Simple_repeat 1 443 0 8 924 257 241 117 49 chr17 44476905 44477084 -50795567 - Arthur1 DNA Tip100 -95 3852 3666 8 924 561 285 88 11 chr17 44477095 44477276 -50795375 - B3 SINE B2 -21 195 1 8 924 447 19 0 0 chr17 44477282 44477334 -50795317 + (TG)n Simple_repeat Simple_repeat 2 53 0 8 924 549 237 37 30 chr17 44477355 44477490 -50795161 - B3A SINE B2 -57 141 6 8 924 780 214 0 0 chr17 44477549 44477722 -50794929 + T-rich Low_complexity Low_complexity 3 175 0 8 924 224 71 0 0 chr17 44477722 44477750 -50794901 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 8 924 322 146 0 0 chr17 44477761 44477816 -50794835 - ORR1A1 LTR MaLR 0 346 292 8 924 1292 251 85 85 chr17 44477805 44478336 -50794315 + RCHARR1 DNA MER1_type 80 610 -364 8 924 3639 177 62 42 chr17 44478381 44479236 -50793415 - RMER13B LTR ERVK -36 872 1 8 924 1258 172 32 9 chr17 44481911 44482128 -50790523 + URR1A DNA MER1_type 5 226 0 8 924 1933 262 121 32 chr17 44482154 44482867 -50789784 + Lx9 LINE L1 6869 7644 0 8 924 1337 253 55 6 chr17 44483431 44483757 -50788894 - MTE2b LTR MaLR -34 345 4 8 924 1241 189 0 5 chr17 44484199 44484422 -50788229 - URR1A DNA MER1_type -4 222 1 8 924 3609 209 73 17 chr17 44485054 44486150 -50786501 + RMER1B Other Other 50 1065 -1 8 924 705 268 60 0 chr17 44486152 44486335 -50786316 + B4A SINE B4 82 275 -17 8 924 288 0 0 0 chr17 44486348 44486380 -50786271 + (CA)n Simple_repeat Simple_repeat 2 33 0 8 924 2248 110 82 12 chr17 44486882 44487297 -50785354 - RLTR28 LTR ERVL -52 472 29 8 924 897 182 38 107 chr17 44487303 44487616 -50785035 - RLTRETN_Mm LTR ERVK -40 353 1 8 924 306 188 0 45 chr17 44487616 44487671 -50784980 - RLTR28 LTR ERVL -472 52 1 8 924 180 0 0 0 chr17 44487764 44487784 -50784867 + (CA)n Simple_repeat Simple_repeat 1 20 0 8 924 231 36 0 0 chr17 44487784 44487811 -50784840 + (GA)n Simple_repeat Simple_repeat 2 29 0 8 924 216 0 0 0 chr17 44488403 44488427 -50784224 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 8 924 232 282 28 0 chr17 44488751 44488883 -50783768 + MIRb SINE MIR 25 165 -103 8 924 205 406 0 0 chr17 44489216 44489317 -50783334 - L2a LINE L2 -331 3095 2995 8 924 457 346 66 40 chr17 44489624 44490158 -50782493 + MLT1G3 LTR MaLR 2 554 -1 8 924 30 0 0 0 chr17 44490829 44490859 -50781792 + AT_rich Low_complexity Low_complexity 1 30 0 8 924 465 226 112 9 chr17 44490879 44490995 -50781656 + RSINE1 SINE B4 2 129 -36 8 924 240 59 0 0 chr17 44491004 44491038 -50781613 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 8 924 841 240 91 115 chr17 44491049 44491388 -50781263 - MTE2a LTR MaLR -48 331 1 8 924 2152 232 124 7 chr17 44491859 44492401 -50780250 + Lx6 LINE L1 6849 7453 -7 8 924 226 328 103 8 chr17 44492452 44492578 -50780073 + RSINE1 SINE B4 13 150 -15 8 924 1097 277 6 42 chr17 44495156 44495488 -50777163 - MTE2b LTR MaLR -59 320 1 8 924 254 242 40 90 chr17 44496191 44496291 -50776360 - MER106B DNA MER1_type -964 95 1 8 924 218 213 20 10 chr17 44497053 44497112 -50775539 - L2a LINE L2 -2 3424 3329 8 924 323 264 212 75 chr17 44497349 44497509 -50775142 + B3A SINE B2 1 182 -16 8 924 269 192 40 20 chr17 44498412 44498513 -50774138 + (TAA)n Simple_repeat Simple_repeat 3 105 0 8 924 216 86 0 0 chr17 44499659 44499694 -50772957 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 924 424 247 164 31 chr17 44500134 44500293 -50772358 - MER20 DNA MER1_type -34 185 6 1 924 226 257 171 68 chr17 44501166 44501283 -50771368 + ORR1E LTR MaLR 1 129 -230 2 924 222 316 0 0 chr17 44501291 44501348 -50771303 + CT-rich Low_complexity Low_complexity 4 60 0 3 924 288 295 52 40 chr17 44502297 44502470 -50770181 - MLT1A0 LTR MaLR -122 243 69 4 924 198 167 0 0 chr17 44503173 44503209 -50769442 + CT-rich Low_complexity Low_complexity 3 38 0 5 924 210 329 14 0 chr17 44503295 44503368 -50769283 + CT-rich Low_complexity Low_complexity 4 77 0 6 924 202 94 75 0 chr17 44504312 44504365 -50768286 + A-rich Low_complexity Low_complexity 2 58 0 7 924 371 358 45 17 chr17 44505061 44505240 -50767411 - L3b LINE CR1 -265 217 34 8 924 492 18 0 0 chr17 44505300 44505357 -50767294 + (TG)n Simple_repeat Simple_repeat 1 57 0 9 924 405 70 0 0 chr17 44505609 44505666 -50766985 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 924 524 257 42 0 chr17 44505685 44505829 -50766822 - B3A SINE B2 -48 150 1 1 924 2182 139 9 0 chr17 44506113 44506436 -50766215 + ORR1A3 LTR MaLR 1 326 0 1 924 22 0 0 0 chr17 44506440 44506462 -50766189 + AT_rich Low_complexity Low_complexity 1 22 0 1 924 340 344 89 21 chr17 44506771 44507006 -50765645 + B4 SINE B4 27 277 -15 1 924 503 187 65 0 chr17 44507113 44507220 -50765431 + Lx9 LINE L1 7080 7193 -451 1 924 280 356 15 8 chr17 44507254 44507384 -50765267 + Lx9 LINE L1 7269 7399 -245 1 924 343 311 0 28 chr17 44507765 44507874 -50764777 - ID_B1 SINE B4 0 224 119 1 924 268 312 86 37 chr17 44507986 44508149 -50764502 - CR1_Mam LINE CR1 -1818 386 216 1 924 378 0 0 0 chr17 44509785 44509827 -50762824 + (TC)n Simple_repeat Simple_repeat 2 43 0 1 924 264 59 0 0 chr17 44509827 44509860 -50762791 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 924 879 288 22 58 chr17 44509875 44510151 -50762500 - B4 SINE B4 -25 267 2 2 924 246 32 0 0 chr17 44510346 44510377 -50762274 + (TC)n Simple_repeat Simple_repeat 2 32 0 2 924 1197 106 0 0 chr17 44510378 44510558 -50762093 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 924 264 259 11 23 chr17 44511509 44511596 -50761055 - MTEb LTR MaLR -15 364 279 2 924 252 262 104 4 chr17 44511844 44511944 -50760707 - MTEb LTR MaLR -260 114 8 2 924 418 301 19 58 chr17 44512084 44512239 -50760412 + B3A SINE B2 49 197 -1 2 924 23 0 0 0 chr17 44512307 44512330 -50760321 + AT_rich Low_complexity Low_complexity 1 23 0 2 924 347 280 0 0 chr17 44512863 44512938 -50759713 + ID4 SINE ID 9 83 0 2 924 296 308 95 9 chr17 44513032 44513137 -50759514 - MER81 DNA AcHobo 0 114 1 2 924 541 209 122 0 chr17 44513428 44513543 -50759108 + B3 SINE B2 2 130 -86 2 924 594 0 0 0 chr17 44513631 44513697 -50758954 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 2 924 450 322 7 20 chr17 44513907 44514053 -50758598 - RSINE1 SINE B4 -18 147 4 3 924 679 224 0 39 chr17 44514240 44514393 -50758258 - RSINE1 SINE B4 -8 157 11 3 924 396 0 0 0 chr17 44514963 44515007 -50757644 + (TC)n Simple_repeat Simple_repeat 1 44 0 3 924 357 24 0 0 chr17 44515008 44515050 -50757601 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 924 713 309 54 18 chr17 44515090 44515367 -50757284 - B4 SINE B4 -3 289 3 3 924 270 0 0 0 chr17 44515433 44515463 -50757188 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 924 1609 167 51 3 chr17 44516107 44516402 -50756249 + Lx4A LINE L1 6750 7058 0 3 924 244 226 145 0 chr17 44517392 44517454 -50755197 + MTEa LTR MaLR 1 71 -308 3 924 21 0 0 0 chr17 44517507 44517528 -50755123 + AT_rich Low_complexity Low_complexity 1 21 0 3 924 1011 267 83 19 chr17 44517557 44517920 -50754731 + MTD LTR MaLR 20 405 -14 3 924 844 237 110 62 chr17 44517934 44518069 -50754582 + MTEa LTR MaLR 73 205 -174 3 924 2465 79 176 0 chr17 44518069 44518473 -50754178 + IAPLTR2_Mm LTR ERVK 1 475 0 4 924 844 237 110 62 chr17 44518473 44518629 -50754022 + MTEa LTR MaLR 206 378 -1 3 924 7053 84 18 24 chr17 44518773 44519774 -50752877 - L1_Mus3 LINE L1 0 6638 5644 4 924 877 242 92 144 chr17 44520553 44520890 -50751761 + MTE2b LTR MaLR 18 332 -47 4 924 221 0 35 0 chr17 44520890 44520919 -50751732 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 4 924 877 242 92 144 chr17 44520919 44520963 -50751688 + MTE2b LTR MaLR 333 378 -1 4 924 612 262 110 27 chr17 44521004 44521267 -50751384 - MER33 DNA MER1_type -13 311 27 4 924 1036 294 31 28 chr17 44521360 44521717 -50750934 - ORR1E LTR MaLR 0 359 2 4 924 676 271 121 50 chr17 44522232 44522554 -50750097 + MER121 Unknown Unknown 60 404 -8 4 924 565 80 11 11 chr17 44522849 44522938 -50749713 + (CATATA)n Simple_repeat Simple_repeat 2 90 0 4 924 1376 79 21 26 chr17 44523761 44523955 -50748696 - B2_Mm2 SINE B2 -2 193 1 4 924 522 0 0 0 chr17 44524389 44524447 -50748204 + (TC)n Simple_repeat Simple_repeat 1 58 0 4 924 387 0 0 0 chr17 44524447 44524489 -50748162 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 924 483 242 75 8 chr17 44524783 44524916 -50747735 + RSINE1 SINE B4 17 158 -7 5 924 1340 116 86 118 chr17 44525873 44526177 -50746474 - ORR1B1 LTR MaLR -62 332 39 5 924 592 292 64 14 chr17 44526177 44526443 -50746208 - L1_Mur3 LINE L1 -727 5570 5261 5 924 814 273 70 31 chr17 44526664 44526921 -50745730 + B4 SINE B4 26 292 0 5 924 257 336 79 9 chr17 44527743 44527857 -50744794 - MER106B DNA MER1_type -937 122 1 5 924 8159 57 0 4 chr17 44528429 44529500 -50743151 - L1Md_F2 LINE L1 0 6582 5516 5 924 4768 59 2 0 chr17 44529500 44530092 -50742559 + L1Md_F2 LINE L1 4938 5530 -353 5 924 3824 101 0 11 chr17 44530961 44531504 -50741147 - L1Md_F2 LINE L1 -1 6581 6045 5 924 1807 171 42 22 chr17 44532134 44532492 -50740159 - ORR1B2 LTR MaLR -1 366 2 5 924 1170 189 4 22 chr17 44532530 44532757 -50739894 - URR1B DNA MER1_type -2 223 1 5 924 394 262 84 0 chr17 44532898 44533005 -50739646 + MER58A DNA MER1_type 20 135 -89 6 924 276 102 0 0 chr17 44533005 44533054 -50739597 + (A)n Simple_repeat Simple_repeat 1 49 0 6 924 1293 230 133 11 chr17 44533231 44533592 -50739059 - MTD LTR MaLR -14 405 1 6 924 211 306 24 0 chr17 44533709 44533794 -50738857 + MIR SINE MIR 114 200 -62 6 924 232 302 16 0 chr17 44534134 44534197 -50738454 - ID4_ SINE ID -13 70 7 6 924 288 292 63 45 chr17 44534210 44534321 -50738330 - PB1D10 SINE Alu -3 114 2 6 924 1117 141 126 0 chr17 44534547 44534746 -50737905 - URR1A DNA MER1_type 0 226 3 6 924 810 31 0 0 chr17 44535628 44535725 -50736926 + (TC)n Simple_repeat Simple_repeat 1 97 0 6 924 415 218 31 24 chr17 44535996 44536123 -50736528 - RCHARR1 DNA MER1_type -99 875 748 6 924 1322 290 18 34 chr17 44536120 44536563 -50736088 - RCHARR1 DNA MER1_type -505 469 34 6 924 238 268 157 14 chr17 44536601 44536741 -50735910 - RSINE1 SINE B4 -2 163 4 6 924 921 238 54 44 chr17 44536769 44537064 -50735587 - L1_Rod LINE L1 -25 5822 5525 7 924 530 260 226 13 chr17 44537055 44537281 -50735370 + Lx8 LINE L1 7195 7468 -5 7 924 215 152 0 21 chr17 44537283 44537313 -50735338 + (TATATG)n Simple_repeat Simple_repeat 1 30 0 7 924 1137 128 0 0 chr17 44537313 44537493 -50735158 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 924 215 152 0 21 chr17 44537493 44537509 -50735142 + (TATATG)n Simple_repeat Simple_repeat 3 18 0 7 924 788 306 22 35 chr17 44538273 44538503 -50734148 + B4 SINE B4 66 292 0 7 924 513 47 0 0 chr17 44538644 44538708 -50733943 + (GA)n Simple_repeat Simple_repeat 1 64 0 7 924 654 236 159 108 chr17 44539833 44540166 -50732485 + MTD LTR MaLR 2 351 -68 7 924 180 0 0 0 chr17 44540166 44540186 -50732465 + (A)n Simple_repeat Simple_repeat 1 20 0 7 924 189 0 0 0 chr17 44540383 44540404 -50732247 + (A)n Simple_repeat Simple_repeat 1 21 0 7 924 861 284 43 22 chr17 44540495 44540772 -50731879 - B4 SINE B4 -9 283 1 8 924 21 0 0 0 chr17 44540772 44540793 -50731858 + AT_rich Low_complexity Low_complexity 1 21 0 8 924 345 214 14 0 chr17 44541236 44541306 -50731345 - ORR1E LTR MaLR -285 74 4 8 924 237 200 23 186 chr17 44541421 44541507 -50731144 + MARNA DNA Mariner 473 544 -42 8 924 192 277 248 9 chr17 44541971 44542084 -50730567 + MIRb SINE MIR 35 174 -94 8 924 306 0 0 0 chr17 44542313 44542347 -50730304 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 924 459 0 0 0 chr17 44542352 44542403 -50730248 + (GA)n Simple_repeat Simple_repeat 1 51 0 8 924 686 85 187 78 chr17 44542874 44543040 -50729611 - B2_Mm2 SINE B2 -2 193 10 8 924 360 0 0 0 chr17 44543179 44543219 -50729432 + (TC)n Simple_repeat Simple_repeat 1 40 0 8 924 396 0 0 0 chr17 44543219 44543262 -50729389 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 924 820 180 148 27 chr17 44544291 44544474 -50728177 + B3 SINE B2 4 208 -8 9 924 772 308 43 24 chr17 44546518 44546771 -50725880 - B4 SINE B4 0 292 35 9 924 451 237 217 12 chr17 44546797 44547026 -50725625 + MTD LTR MaLR 36 301 -95 9 924 1157 80 28 6 chr17 44547233 44547410 -50725241 - L1_Mus3 LINE L1 0 6638 6458 9 924 216 97 0 0 chr17 44547466 44547497 -50725154 + (A)n Simple_repeat Simple_repeat 1 31 0 9 924 214 323 37 52 chr17 44548096 44548230 -50724421 - L3b LINE CR1 -218 264 133 9 924 258 56 0 0 chr17 44548478 44548514 -50724137 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 9 924 1904 176 22 8 chr17 44550046 44550413 -50722238 - ORR1B1 LTR MaLR -22 372 1 9 924 495 0 0 0 chr17 44551164 44551219 -50721432 + (TG)n Simple_repeat Simple_repeat 1 55 0 9 924 520 263 122 0 chr17 44551226 44551382 -50721269 - B3A SINE B2 -23 175 1 9 924 1663 212 72 14 chr17 44551453 44551850 -50720801 - MTD LTR MaLR -16 403 3 1 924 1019 142 6 0 chr17 44551859 44552035 -50720616 + (TTC)n Simple_repeat Simple_repeat 3 179 0 1 924 1076 119 11 0 chr17 44552045 44552221 -50720430 + (TTCTCC)n Simple_repeat Simple_repeat 1 178 0 1 924 796 178 18 0 chr17 44552236 44552405 -50720246 + CT-rich Low_complexity Low_complexity 6 177 0 1 924 409 258 71 40 chr17 44552430 44552539 -50720112 - B3A SINE B2 -53 163 63 1 924 4774 143 122 20 chr17 44552539 44553431 -50719220 + RLTR13C1 LTR ERVK 1 983 0 1 924 409 257 83 35 chr17 44553431 44553481 -50719170 - B3A SINE B2 -136 62 1 1 924 378 0 0 0 chr17 44553508 44553550 -50719101 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 924 1099 221 22 37 chr17 44553652 44553924 -50718727 + ORR1D1 LTR MaLR 107 374 0 1 924 522 304 6 57 chr17 44553953 44554110 -50718541 + RSINE1 SINE B4 11 159 -6 1 924 261 135 0 0 chr17 44554110 44554162 -50718489 + (GA)n Simple_repeat Simple_repeat 1 52 0 1 924 582 309 104 0 chr17 44554177 44554378 -50718273 + ID_B1 SINE B4 1 222 -2 1 924 638 316 17 73 chr17 44554380 44554667 -50717984 + B4 SINE B4 4 274 -18 1 924 280 304 0 16 chr17 44555080 44555173 -50717478 + B3A SINE B2 72 160 -56 1 924 550 329 122 49 chr17 44556220 44556466 -50716185 + B4 SINE B4 29 292 0 1 924 229 325 13 13 chr17 44556468 44556546 -50716105 + (CATG)n Simple_repeat Simple_repeat 1 78 0 1 924 423 215 189 45 chr17 44557071 44557341 -50715310 - Lx4B LINE L1 -5 7053 6692 1 924 199 93 23 23 chr17 44557984 44558028 -50714623 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 924 1389 59 0 0 chr17 44558463 44558801 -50713850 + (CA)n Simple_repeat Simple_repeat 1 338 0 1 924 281 310 141 26 chr17 44558867 44559059 -50713592 + MIRb SINE MIR 29 242 -26 1 924 561 184 0 0 chr17 44561873 44561982 -50710669 + CT-rich Low_complexity Low_complexity 1 109 0 1 924 457 279 5 85 chr17 44562044 44562232 -50710419 + Lx9 LINE L1 7265 7437 -207 1 924 180 0 0 0 chr17 44562316 44562336 -50710315 + (CACAG)n Simple_repeat Simple_repeat 1 20 0 1 924 326 121 15 0 chr17 44562710 44562776 -50709875 + (GA)n Simple_repeat Simple_repeat 1 67 0 1 924 697 314 52 45 chr17 44563479 44563504 -50709147 - B4A SINE B4 0 292 270 1 924 243 0 0 0 chr17 44563504 44563531 -50709120 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 924 697 314 52 45 chr17 44563531 44563795 -50708856 - B4A SINE B4 -23 269 1 1 924 1198 68 0 0 chr17 44563937 44564084 -50708567 + B1_Mus1 SINE Alu 2 148 0 1 925 600 215 107 0 chr17 44564663 44564784 -50707867 - ID_B1 SINE B4 0 224 91 1 925 233 136 91 0 chr17 44564885 44564929 -50707722 - B4 SINE B4 -242 50 3 1 925 384 287 24 32 chr17 44566164 44566290 -50706361 + Tigger5 DNA MER2_type 88 212 -2194 1 925 344 73 0 35 chr17 44568866 44568923 -50703728 + (TTTTG)n Simple_repeat Simple_repeat 1 55 0 1 925 369 62 0 0 chr17 44569086 44569134 -50703517 + (GAA)n Simple_repeat Simple_repeat 2 49 0 1 925 182 128 26 0 chr17 44569443 44569482 -50703169 + GA-rich Low_complexity Low_complexity 2 41 0 1 925 720 231 0 8 chr17 44570638 44570769 -50701882 + RSINE1 SINE B4 15 144 -21 1 925 1119 275 50 25 chr17 44570963 44571280 -50701371 + MTEa LTR MaLR 51 375 -4 1 925 328 271 0 0 chr17 44572319 44572389 -50700262 + PB1D7 SINE Alu 38 107 -13 1 925 265 24 48 0 chr17 44572389 44572431 -50700220 + (CAAAA)n Simple_repeat Simple_repeat 1 44 0 1 925 708 271 18 54 chr17 44574297 44574465 -50698186 + RSINE1 SINE B4 2 163 -2 1 925 678 217 0 0 chr17 44574544 44574664 -50697987 - B3 SINE B2 -95 121 2 1 925 636 14 0 0 chr17 44575247 44575320 -50697331 + (TG)n Simple_repeat Simple_repeat 2 74 0 1 925 333 0 0 0 chr17 44575497 44575534 -50697117 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 925 1417 279 21 29 chr17 44576103 44576480 -50696171 - MTEa LTR MaLR -3 376 3 1 925 582 205 8 76 chr17 44576783 44576915 -50695736 + RSINE1 SINE B4 43 165 0 1 925 192 322 11 11 chr17 44577198 44577286 -50695365 + MIRm SINE MIR 49 136 -140 1 925 639 164 23 12 chr17 44579433 44579606 -50693045 + (TA)n Simple_repeat Simple_repeat 2 176 0 1 925 228 351 0 9 chr17 44579608 44579720 -50692931 + (TATATG)n Simple_repeat Simple_repeat 2 112 0 1 925 395 300 139 71 chr17 44579723 44579989 -50692662 - B4A SINE B4 -6 286 3 1 925 337 305 11 0 chr17 44580015 44580110 -50692541 - ID_B1 SINE B4 0 224 129 1 925 738 215 0 0 chr17 44580199 44580320 -50692331 - B1F1 SINE Alu -10 139 19 1 925 509 244 83 39 chr17 44580984 44581189 -50691462 + B3 SINE B2 1 214 -2 1 925 406 324 26 33 chr17 44581194 44581342 -50691309 + B4A SINE B4 83 229 -63 1 925 657 272 90 24 chr17 44581342 44581553 -50691098 + B4A SINE B4 1 225 -67 1 925 364 326 204 6 chr17 44581544 44581720 -50690931 - B4A SINE B4 -77 215 5 1 925 336 143 0 0 chr17 44582055 44582125 -50690526 + (CAGAGA)n Simple_repeat Simple_repeat 2 71 0 1 925 180 333 61 0 chr17 44582474 44582540 -50690111 - MIRb SINE MIR -173 95 26 1 925 300 322 117 58 chr17 44582563 44582837 -50689814 - L1ME3B LINE L1 -4 6236 5947 1 925 721 267 137 54 chr17 44583085 44583362 -50689289 - MLT1A LTR MaLR -1 373 74 1 925 1052 212 84 36 chr17 44583363 44583613 -50689038 + B4 SINE B4 26 287 -5 1 925 593 187 78 8 chr17 44583652 44583774 -50688877 + MT2A LTR ERVL 347 554 -47 1 925 213 121 0 0 chr17 44583775 44583808 -50688843 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 925 686 301 67 90 chr17 44584088 44584431 -50688220 - ORR1E LTR MaLR 0 359 25 1 925 796 139 259 0 chr17 44584431 44584589 -50688062 + Lx2 LINE L1 6799 6997 0 1 925 2160 168 75 18 chr17 44584842 44585364 -50687287 + ORR1C2-int LTR MaLR 1068 1739 -224 1 925 1801 133 158 12 chr17 44585364 44585699 -50686952 + ORR1C2 LTR MaLR 1 384 0 1 925 222 118 0 0 chr17 44586476 44586510 -50686141 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 925 999 262 61 18 chr17 44586511 44586740 -50685911 - B4A SINE B4 -11 281 43 1 925 210 315 0 0 chr17 44587501 44587555 -50685096 + L2a LINE L2 3364 3417 -9 1 925 604 214 22 30 chr17 44587923 44588058 -50684593 + RSINE1 SINE B4 17 150 -15 1 925 293 261 126 75 chr17 44588058 44588097 -50684554 + B3A SINE B2 16 198 0 1 925 600 303 66 15 chr17 44589592 44589790 -50682861 + RMER15 LTR ERVL 354 561 -14 1 925 568 295 10 59 chr17 44590461 44590687 -50681964 - RMER13A LTR ERVK -12 896 686 1 925 2446 188 118 8 chr17 44590666 44591190 -50681461 - RMER13A LTR ERVK -278 582 1 1 925 905 193 0 7 chr17 44591546 44591697 -50680954 + B1_Mur4 SINE Alu 1 150 0 1 925 267 55 34 68 chr17 44591731 44591790 -50680861 + (CAGAGA)n Simple_repeat Simple_repeat 2 58 0 1 925 535 262 33 118 chr17 44591956 44592168 -50680483 - MER3 DNA MER1_type -15 194 1 1 925 315 122 0 0 chr17 44593229 44593278 -50679373 + (T)n Simple_repeat Simple_repeat 1 49 0 1 925 238 83 83 0 chr17 44593491 44593539 -50679112 + C-rich Low_complexity Low_complexity 3 54 0 1 925 282 87 0 0 chr17 44594164 44594210 -50678441 + (CAAAAA)n Simple_repeat Simple_repeat 1 46 0 1 925 1137 247 32 130 chr17 44594210 44594587 -50678064 - MTE2b LTR MaLR -37 342 3 1 925 831 263 60 10 chr17 44594750 44594950 -50677701 + MTD LTR MaLR 1 210 -209 1 925 2955 182 38 11 chr17 44594952 44595507 -50677144 + Lx6 LINE L1 6451 7020 -440 1 925 292 277 0 0 chr17 44596171 44596254 -50676397 - MamRep564 Unknown Unknown -126 231 149 1 925 307 288 0 12 chr17 44596478 44596559 -50676092 + (TG)n Simple_repeat Simple_repeat 1 80 0 1 925 302 221 101 14 chr17 44596581 44596650 -50676001 - B4 SINE B4 -217 75 1 1 925 228 67 0 0 chr17 44596660 44596690 -50675961 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1 925 207 0 0 0 chr17 44597071 44597094 -50675557 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 925 449 161 11 0 chr17 44597612 44597699 -50674952 + CT-rich Low_complexity Low_complexity 4 91 0 1 925 1233 101 0 0 chr17 44597709 44597888 -50674763 + (TTCTC)n Simple_repeat Simple_repeat 2 180 0 1 925 620 250 0 22 chr17 44597898 44598033 -50674618 - ID_B1 SINE B4 -2 222 91 1 925 396 0 0 0 chr17 44598044 44598088 -50674563 + (TTTTG)n Simple_repeat Simple_repeat 1 44 0 1 925 415 296 0 57 chr17 44598088 44598128 -50674523 - B1F SINE Alu -17 132 94 1 925 438 20 0 0 chr17 44598128 44598179 -50674472 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 925 415 296 0 57 chr17 44598179 44598278 -50674373 - B1F SINE Alu -56 93 1 1 925 369 383 27 32 chr17 44598462 44598683 -50673968 + B4 SINE B4 57 276 -16 1 925 541 48 48 0 chr17 44598716 44598799 -50673852 + (CAGAGA)n Simple_repeat Simple_repeat 2 88 0 1 925 243 292 126 66 chr17 44599640 44599672 -50672979 + L2a LINE L2 2858 2880 -539 1 925 183 42 0 0 chr17 44599672 44599696 -50672955 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 925 258 299 118 52 chr17 44599696 44599909 -50672742 + L2a LINE L2 2881 3117 -309 1 925 230 241 146 22 chr17 44600040 44600129 -50672522 + L2a LINE L2 3294 3393 -33 1 925 446 310 81 17 chr17 44600945 44601119 -50671532 - ID_B1 SINE B4 -31 193 9 1 925 1597 40 0 0 chr17 44601611 44601809 -50670842 - L1Md_F2 LINE L1 -1 6581 6384 1 925 1011 299 92 16 chr17 44601826 44602316 -50670335 - Lx8 LINE L1 -2 7471 6945 1 925 236 378 17 8 chr17 44602534 44602654 -50669997 + MIRc SINE MIR 64 184 -84 1 925 452 151 27 0 chr17 44604571 44604644 -50668007 + RLTR16 LTR ERVK 1 75 -430 1 925 756 61 0 0 chr17 44604641 44604739 -50667912 + B1_Mus2 SINE Alu 44 141 -6 1 925 1017 84 0 43 chr17 44604741 44604927 -50667724 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 1 925 276 30 0 0 chr17 44604930 44604963 -50667688 + (GGA)n Simple_repeat Simple_repeat 3 35 0 2 925 1105 248 121 31 chr17 44604973 44605360 -50667291 + RLTR16 LTR ERVK 72 493 -12 1 925 1090 190 14 9 chr17 44605479 44605692 -50666959 + B3 SINE B2 2 215 -1 2 925 184 324 29 14 chr17 44605747 44605816 -50666835 - MIRc SINE MIR -197 71 2 2 925 236 254 195 109 chr17 44605854 44606075 -50666576 - RMER1C Other Other -3 1339 1100 2 925 710 209 76 0 chr17 44605922 44606080 -50666571 - Lx8 LINE L1 -99 7374 7205 2 925 991 144 0 7 chr17 44606636 44606783 -50665868 - B1_Mus1 SINE Alu -1 147 2 2 925 219 114 0 0 chr17 44606931 44606966 -50665685 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 925 219 233 0 0 chr17 44606967 44607010 -50665641 + GA-rich Low_complexity Low_complexity 6 48 0 2 925 357 43 0 0 chr17 44607123 44607170 -50665481 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 925 487 315 57 135 chr17 44607189 44607486 -50665165 - B4A SINE B4 -18 274 1 2 925 298 261 21 64 chr17 44607486 44607574 -50665077 + MER3 DNA MER1_type 126 209 0 2 925 3263 32 153 19 chr17 44607720 44608139 -50664512 - IAPLTR2_Mm LTR ERVK 0 475 1 2 925 667 260 138 0 chr17 44608164 44608360 -50664291 - ID_B1 SINE B4 0 224 2 2 925 1099 174 87 0 chr17 44608366 44608573 -50664078 - URR1B DNA MER1_type 0 225 1 2 925 473 331 8 0 chr17 44608696 44608817 -50663834 + B3A SINE B2 27 148 -50 2 925 197 65 0 31 chr17 44608818 44608850 -50663801 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 925 1699 291 92 38 chr17 44610836 44611852 -50660799 - Lx9 LINE L1 -1676 5968 4853 2 925 555 225 106 21 chr17 44611889 44612030 -50660621 - B4 SINE B4 -84 208 56 2 925 1003 233 79 40 chr17 44612377 44612654 -50659997 + B4 SINE B4 5 292 0 2 925 213 278 0 0 chr17 44612654 44612708 -50659943 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 925 282 336 0 27 chr17 44612772 44612882 -50659769 + MLT1A1 LTR MaLR 302 408 0 2 925 200 294 168 26 chr17 44613258 44613545 -50659106 + L2a LINE L2 2814 3146 -280 2 925 511 321 89 19 chr17 44613763 44613976 -50658675 - Charlie1a DNA MER1_type -378 1077 850 2 925 824 297 172 13 chr17 44613984 44614448 -50658203 + Charlie1a DNA MER1_type 206 743 -712 2 925 634 246 45 0 chr17 44614463 44614597 -50658054 + ID_B1 SINE B4 85 224 0 2 925 229 240 20 204 chr17 44614655 44614807 -50657844 + RSINE1 SINE B4 42 165 0 2 925 342 0 0 0 chr17 44614808 44614846 -50657805 + (GA)n Simple_repeat Simple_repeat 2 39 0 2 925 35 0 0 0 chr17 44614850 44614885 -50657766 + AT_rich Low_complexity Low_complexity 1 35 0 2 925 234 216 43 36 chr17 44615035 44615174 -50657477 + GA-rich Low_complexity Low_complexity 6 145 0 2 925 592 168 5 53 chr17 44615188 44615377 -50657274 + GA-rich Low_complexity Low_complexity 1 180 0 2 925 329 279 128 13 chr17 44615709 44615865 -50656786 - L1M5 LINE L1 -345 5779 5606 2 925 292 266 0 0 chr17 44615872 44615966 -50656685 - L1MA10 LINE L1 -3 6331 6238 2 925 36 23 0 0 chr17 44615980 44616023 -50656628 + AT_rich Low_complexity Low_complexity 1 43 0 2 925 387 0 0 0 chr17 44616115 44616158 -50656493 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 925 422 354 12 0 chr17 44616234 44616395 -50656256 - L1MC4 LINE L1 -2096 5946 5784 2 925 729 0 0 0 chr17 44616806 44616887 -50655764 + (TAGA)n Simple_repeat Simple_repeat 2 82 0 2 925 456 19 0 0 chr17 44617550 44617603 -50655048 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 925 217 242 44 29 chr17 44618531 44618599 -50654052 + L2b LINE L2 3307 3375 0 2 925 7668 75 22 1 chr17 44619322 44620639 -50652012 + L1_Mus3 LINE L1 5293 6637 -1 2 925 288 0 0 0 chr17 44620704 44620736 -50651915 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 925 376 335 128 13 chr17 44621456 44621683 -50650968 - MLT1J2 LTR MaLR -127 321 69 2 925 380 330 68 17 chr17 44621745 44621979 -50650672 + MIRb SINE MIR 20 265 -3 2 925 3046 209 32 39 chr17 44622056 44622774 -50649877 - RMER1C Other Other -1 1341 629 2 925 189 167 61 20 chr17 44623241 44623290 -50649361 + MIR SINE MIR 92 142 -120 2 925 412 186 19 47 chr17 44623674 44624146 -50648505 + (TG)n Simple_repeat Simple_repeat 1 458 0 2 925 563 262 94 27 chr17 44624146 44624295 -50648356 - RSINE1 SINE B4 -3 162 4 2 925 345 162 25 63 chr17 44624524 44624603 -50648048 - MLT1J2 LTR MaLR -323 125 50 2 925 329 318 59 164 chr17 44624894 44625180 -50647471 - MLT1H LTR MaLR -159 390 135 2 925 400 303 15 119 chr17 44625247 44625517 -50647134 - L1M3 LINE L1 -631 5549 5310 2 925 249 203 103 48 chr17 44626046 44626058 -50646593 - RMER17D2 LTR ERVK -420 389 379 2 925 243 0 0 0 chr17 44626058 44626085 -50646566 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 925 249 203 103 48 chr17 44626085 44626217 -50646434 - RMER17D2 LTR ERVK -431 378 237 2 925 366 42 0 0 chr17 44626281 44626329 -50646322 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 925 270 0 0 0 chr17 44627614 44627644 -50645007 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 925 231 36 0 0 chr17 44628088 44628116 -50644535 + (TCTG)n Simple_repeat Simple_repeat 3 30 0 2 925 207 339 67 34 chr17 44628227 44628346 -50644305 + MIR3 SINE MIR 7 129 -79 2 925 181 316 35 17 chr17 44628868 44628926 -50643725 - L2b LINE L2 -5 3370 3312 2 925 793 239 223 13 chr17 44629150 44629207 -50643444 - B4 SINE B4 -14 278 217 2 925 348 24 0 0 chr17 44629207 44629248 -50643403 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 2 925 793 239 223 13 chr17 44629248 44629419 -50643232 - B4 SINE B4 -76 216 2 2 925 210 305 23 47 chr17 44630234 44630320 -50642331 + MIR SINE MIR 40 123 -145 2 925 270 0 0 0 chr17 44630549 44630579 -50642072 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2 925 338 215 82 4 chr17 44630642 44630746 -50641905 - B1_Mus2 SINE Alu 0 120 1 2 925 386 295 24 8 chr17 44630868 44630991 -50641660 - ID_B1 SINE B4 -2 222 98 2 925 477 299 77 18 chr17 44630992 44631162 -50641489 + MLT1A1 LTR MaLR 229 408 0 2 925 829 264 14 5 chr17 44631284 44631501 -50641150 + ID_B1 SINE B4 3 221 -3 2 925 504 0 0 0 chr17 44631972 44632028 -50640623 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 925 342 0 0 0 chr17 44632029 44632067 -50640584 + (GA)n Simple_repeat Simple_repeat 1 38 0 2 925 334 233 80 23 chr17 44632606 44632694 -50639957 + MER20 DNA MER1_type 38 130 -89 2 925 229 264 36 136 chr17 44634216 44634356 -50638295 - ORR1D2 LTR MaLR -7 363 238 2 925 588 14 0 0 chr17 44634416 44634485 -50638166 + (CA)n Simple_repeat Simple_repeat 2 70 0 2 925 518 229 11 68 chr17 44635903 44635926 -50636725 + MTD LTR MaLR 4 20 -376 2 925 225 0 0 0 chr17 44635926 44635951 -50636700 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2 925 518 188 10 10 chr17 44635951 44636041 -50636610 + MTD LTR MaLR 21 111 -308 2 925 337 333 107 41 chr17 44636097 44636219 -50636432 + ID_B1 SINE B4 77 206 -18 2 925 1328 239 28 61 chr17 44636305 44636697 -50635954 + MTEb LTR MaLR 1 379 0 2 925 238 290 61 51 chr17 44636698 44636796 -50635855 + MLT1J LTR MaLR 89 187 -325 2 925 684 94 0 0 chr17 44636887 44636993 -50635658 + (TC)n Simple_repeat Simple_repeat 1 106 0 2 925 180 0 0 0 chr17 44636993 44637012 -50635639 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 925 621 40 0 0 chr17 44637012 44637088 -50635563 + (GA)n Simple_repeat Simple_repeat 2 77 0 2 925 184 277 0 41 chr17 44637884 44637933 -50634718 - MIR SINE MIR -66 142 96 2 925 339 85 0 0 chr17 44638042 44638089 -50634562 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 925 566 292 196 11 chr17 44638657 44639014 -50633637 + L1MB3 LINE L1 5703 6125 -49 2 925 213 291 63 71 chr17 44639171 44639297 -50633354 - L2a LINE L2 -209 3217 3093 2 925 538 298 50 50 chr17 44639728 44639988 -50632663 + L2a LINE L2 2993 3266 -121 2 925 921 309 44 7 chr17 44640103 44640377 -50632274 + B4A SINE B4 9 292 0 2 925 653 270 66 49 chr17 44640377 44640652 -50631999 + RLTR20A2 LTR ERVK 5 284 -250 2 925 239 54 27 0 chr17 44640676 44640713 -50631938 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 925 551 15 15 0 chr17 44640713 44640781 -50631870 + (GA)n Simple_repeat Simple_repeat 2 70 0 2 925 22 56 0 0 chr17 44643405 44643441 -50629210 + AT_rich Low_complexity Low_complexity 1 36 0 2 925 272 254 0 14 chr17 44643801 44643873 -50628778 + ID2 SINE ID 4 74 -9 2 925 1015 256 49 8 chr17 44643811 44644075 -50628576 + B4 SINE B4 14 288 -4 2 925 325 277 0 38 chr17 44644083 44644188 -50628463 + (CATATA)n Simple_repeat Simple_repeat 1 101 0 2 925 185 0 40 0 chr17 44644339 44644364 -50628287 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 2 925 738 227 88 28 chr17 44644417 44644598 -50628053 - ID_B1 SINE B4 -18 206 15 2 925 21 0 0 0 chr17 44644745 44644766 -50627885 + AT_rich Low_complexity Low_complexity 1 21 0 2 925 450 0 0 0 chr17 44645007 44645057 -50627594 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 925 261 0 0 0 chr17 44646319 44646348 -50626303 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 2 925 893 176 0 6 chr17 44646350 44646527 -50626124 + GA-rich Low_complexity Low_complexity 3 178 0 2 925 426 39 0 0 chr17 44647445 44647497 -50625154 + (GA)n Simple_repeat Simple_repeat 2 53 0 2 925 261 0 0 0 chr17 44648788 44648817 -50623834 + (ATTG)n Simple_repeat Simple_repeat 3 31 0 2 925 1868 125 115 0 chr17 44649064 44649359 -50623292 + ORR1A4 LTR MaLR 1 329 0 2 925 227 352 11 22 chr17 44650304 44650394 -50622257 + MTE2b LTR MaLR 278 366 -13 2 925 899 70 8 0 chr17 44651638 44651766 -50620885 + (TCCA)n Simple_repeat Simple_repeat 3 131 0 2 925 262 251 32 24 chr17 44652251 44652322 -50620329 - ID4_ SINE ID -14 69 2 3 925 311 240 31 0 chr17 44652334 44652423 -50620228 - B1_Mur4 SINE Alu -5 145 51 3 925 360 94 0 0 chr17 44652445 44652498 -50620153 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 925 324 0 0 0 chr17 44652506 44652542 -50620109 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 925 263 348 29 0 chr17 44652788 44652857 -50619794 - Charlie12 DNA MER1_type -2794 79 9 3 925 273 338 0 0 chr17 44652796 44652864 -50619787 + RMER30 DNA MER1_type 133 200 -2 3 925 522 0 0 0 chr17 44654220 44654278 -50618373 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 925 264 348 20 54 chr17 44654644 44654793 -50617858 + L2b LINE L2 3227 3370 -5 3 925 4486 143 23 15 chr17 44654854 44655585 -50617066 + RMER19A LTR ERVK 1 737 0 3 925 249 33 0 0 chr17 44655634 44655664 -50616987 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 925 225 0 0 0 chr17 44655892 44655917 -50616734 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 3 925 708 265 117 49 chr17 44655991 44656257 -50616394 - B4 SINE B4 -6 286 3 3 925 748 246 34 44 chr17 44656273 44656477 -50616174 - B3 SINE B2 -11 205 4 3 925 180 0 0 0 chr17 44657007 44657027 -50615624 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 925 224 240 176 52 chr17 44657288 44657424 -50615227 + MIR SINE MIR 108 260 -2 3 925 414 0 0 0 chr17 44658368 44658414 -50614237 + (TC)n Simple_repeat Simple_repeat 1 46 0 3 925 515 317 6 30 chr17 44659051 44659217 -50613434 - RSINE1 SINE B4 0 165 4 3 925 602 256 39 49 chr17 44659414 44659619 -50613032 + ID_B1 SINE B4 4 206 -18 3 925 877 327 63 16 chr17 44659775 44660139 -50612512 + MLT1B LTR MaLR 10 390 0 3 925 955 205 160 34 chr17 44660537 44660774 -50611877 + B4 SINE B4 2 268 -24 3 925 440 62 16 0 chr17 44660830 44660894 -50611757 + (CCA)n Simple_repeat Simple_repeat 3 67 0 3 925 351 282 59 7 chr17 44661716 44661859 -50610792 + MLT2F LTR ERVL 3 164 -465 3 925 1035 306 75 33 chr17 44662031 44662390 -50610261 + MLT1A0 LTR MaLR 1 374 0 3 925 271 278 15 115 chr17 44663445 44663575 -50609076 + MLT2F LTR ERVL 414 530 -1 3 925 190 244 124 79 chr17 44663973 44664062 -50608589 + L2 LINE L2 79 171 -3248 3 925 198 71 0 0 chr17 44664171 44664199 -50608452 + (TCC)n Simple_repeat Simple_repeat 2 29 0 3 925 200 345 51 17 chr17 44664278 44664337 -50608314 + L2b LINE L2 3308 3368 -7 3 925 654 55 0 0 chr17 44664457 44664548 -50608103 + (CAGA)n Simple_repeat Simple_repeat 2 92 0 3 925 662 326 10 40 chr17 44666368 44666668 -50605983 + B4A SINE B4 1 291 -1 3 925 304 297 0 13 chr17 44667280 44667355 -50605296 + polypurine Low_complexity Low_complexity 4 77 0 3 925 1490 188 89 26 chr17 44667874 44668223 -50604428 + ORR1D1 LTR MaLR 1 371 -3 3 925 1969 164 5 88 chr17 44668946 44669354 -50603297 + ORR1D1 LTR MaLR 1 374 0 3 925 752 266 175 0 chr17 44670759 44671058 -50601593 - ORR1D2 LTR MaLR -8 351 1 3 925 1037 285 8 72 chr17 44671396 44671785 -50600866 + MTE2a LTR MaLR 16 379 0 3 925 834 221 82 5 chr17 44672324 44672354 -50600297 - B3 SINE B2 -4 212 183 3 925 219 114 0 0 chr17 44672354 44672389 -50600262 + (TATG)n Simple_repeat Simple_repeat 4 38 0 3 925 834 221 82 5 chr17 44672389 44672554 -50600097 - B3 SINE B2 -34 182 4 3 925 972 292 17 17 chr17 44672625 44672914 -50599737 + B4A SINE B4 4 292 0 3 925 226 183 0 27 chr17 44672922 44672976 -50599675 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 925 288 0 0 0 chr17 44672976 44673008 -50599643 + (GA)n Simple_repeat Simple_repeat 2 33 0 3 925 226 183 0 27 chr17 44673008 44673026 -50599625 + (CA)n Simple_repeat Simple_repeat 2 18 0 3 925 254 307 0 26 chr17 44673097 44673174 -50599477 + MIRb SINE MIR 118 192 -76 3 925 486 232 9 18 chr17 44674206 44674320 -50598331 - RSINE1 SINE B4 -28 137 25 3 925 387 0 0 0 chr17 44674328 44674371 -50598280 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 925 767 211 87 0 chr17 44675173 44675358 -50597293 - ID_B1 SINE B4 0 224 24 3 925 215 231 0 0 chr17 44677145 44677184 -50595467 + A-rich Low_complexity Low_complexity 1 39 0 3 925 351 212 0 0 chr17 44677399 44677484 -50595167 + (CA)n Simple_repeat Simple_repeat 1 85 0 3 925 431 330 118 3 chr17 44678036 44678349 -50594302 + L1MD LINE L1 4824 5172 -974 3 925 586 250 50 50 chr17 44678378 44678538 -50594113 + RSINE1 SINE B4 3 162 -3 3 925 432 0 0 0 chr17 44678556 44678604 -50594047 + (TAAA)n Simple_repeat Simple_repeat 4 51 0 3 925 396 0 0 0 chr17 44678671 44678715 -50593936 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 925 1247 185 9 5 chr17 44678806 44679029 -50593622 - URR1B DNA MER1_type -1 224 1 3 925 26 0 0 0 chr17 44679048 44679074 -50593577 + AT_rich Low_complexity Low_complexity 1 26 0 3 925 435 234 92 52 chr17 44679208 44679361 -50593290 + L1MA10 LINE L1 5681 5839 -340 3 925 565 298 39 92 chr17 44679368 44679597 -50593054 + ID_B1 SINE B4 7 223 -1 3 925 476 275 53 51 chr17 44679598 44679940 -50592711 + L1MA10 LINE L1 5815 6296 -38 3 925 540 0 0 0 chr17 44680309 44680369 -50592282 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 925 3427 27 2 12 chr17 44680682 44681089 -50591562 + L1Md_F2 LINE L1 6167 6569 -13 3 925 517 293 21 144 chr17 44681145 44681436 -50591215 + MLT1B LTR MaLR 136 390 0 3 925 921 120 0 0 chr17 44681450 44681592 -50591059 + (GAAA)n Simple_repeat Simple_repeat 2 143 0 3 925 263 318 26 60 chr17 44682118 44682235 -50590416 + L1MC4a LINE L1 5801 5913 -1969 3 925 378 279 63 37 chr17 44682408 44682598 -50590053 - MIR SINE MIR -34 228 34 3 925 576 0 0 0 chr17 44682664 44682728 -50589923 + (TG)n Simple_repeat Simple_repeat 1 64 0 3 925 281 326 0 21 chr17 44682828 44682922 -50589729 + GA-rich Low_complexity Low_complexity 1 92 0 3 925 225 315 68 80 chr17 44683337 44683499 -50589152 - L3 LINE CR1 -710 3779 3620 3 925 189 0 0 0 chr17 44684768 44684789 -50587862 + (TAA)n Simple_repeat Simple_repeat 2 22 0 3 925 183 80 0 0 chr17 44685102 44685127 -50587524 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 925 1067 258 11 11 chr17 44685746 44686017 -50586634 + B4A SINE B4 4 274 -18 3 925 213 39 0 0 chr17 44686525 44686551 -50586100 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 925 450 0 0 0 chr17 44686551 44686600 -50586051 + (GA)n Simple_repeat Simple_repeat 2 51 0 3 925 219 333 0 0 chr17 44686811 44686889 -50585762 + GA-rich Low_complexity Low_complexity 1 78 0 3 925 208 156 0 0 chr17 44687146 44687178 -50585473 + CT-rich Low_complexity Low_complexity 2 33 0 3 925 301 284 0 12 chr17 44687702 44687958 -50584693 + (TATG)n Simple_repeat Simple_repeat 1 252 0 3 925 287 303 126 36 chr17 44688285 44688730 -50583921 - L1M4b LINE L1 -2632 4374 3890 3 925 587 294 80 53 chr17 44688975 44689373 -50583278 - L1M4b LINE L1 -3461 3545 3137 3 925 260 246 54 40 chr17 44689509 44689657 -50582994 - L1M4b LINE L1 -4164 2938 2789 3 925 950 203 55 96 chr17 44689670 44689843 -50582808 - B4 SINE B4 -30 262 87 3 925 315 65 0 0 chr17 44689843 44689889 -50582762 + (ATTG)n Simple_repeat Simple_repeat 2 47 0 3 925 950 203 55 96 chr17 44689889 44689987 -50582664 - B4 SINE B4 -206 86 2 3 925 412 309 81 61 chr17 44690303 44690699 -50581952 - L1M4b LINE L1 -4537 2471 2068 3 925 580 267 30 45 chr17 44690765 44690965 -50581686 - B3A SINE B2 0 198 2 3 925 360 0 0 0 chr17 44690990 44691030 -50581621 + (TTTTA)n Simple_repeat Simple_repeat 5 44 0 3 925 305 304 78 9 chr17 44691031 44691147 -50581504 - ID_B1 SINE B4 -8 216 93 3 925 1080 264 62 61 chr17 44691208 44691800 -50580851 - L1M4b LINE L1 -5042 1966 1332 3 925 360 0 0 0 chr17 44691801 44691841 -50580810 + (TC)n Simple_repeat Simple_repeat 1 40 0 3 925 385 315 96 48 chr17 44691967 44692154 -50580497 - B3A SINE B2 0 198 3 3 925 243 193 0 109 chr17 44692329 44692348 -50580303 + MTD LTR MaLR 1 15 -364 3 925 225 0 0 0 chr17 44692348 44692373 -50580278 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 3 925 903 257 14 75 chr17 44692373 44692666 -50579985 + MTD LTR MaLR 13 289 -130 3 925 255 226 19 0 chr17 44693248 44693301 -50579350 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 925 897 262 110 0 chr17 44693301 44693564 -50579087 - B4A SINE B4 0 292 1 3 926 1142 45 0 0 chr17 44696159 44696292 -50576359 + B1_Mus2 SINE Alu 2 134 -13 3 926 196 53 53 0 chr17 44696292 44696330 -50576321 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 3 926 810 175 0 0 chr17 44696378 44696555 -50576096 + (TG)n Simple_repeat Simple_repeat 2 178 0 3 926 458 268 75 38 chr17 44696654 44696840 -50575811 - B4 SINE B4 -99 193 1 3 926 600 260 10 57 chr17 44697660 44697852 -50574799 + B3A SINE B2 1 183 -15 3 926 571 260 0 46 chr17 44697940 44698093 -50574558 - B1F SINE Alu -3 146 1 3 926 225 0 0 0 chr17 44698461 44698486 -50574165 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 926 575 314 35 11 chr17 44698499 44698703 -50573948 - B3A SINE B2 -14 202 1 3 926 361 276 31 0 chr17 44698931 44699058 -50573593 - Charlie2a DNA MER1_type -1252 1609 1479 3 926 767 294 28 28 chr17 44699535 44699790 -50572861 + B4A SINE B4 15 269 -23 3 926 414 0 0 0 chr17 44699799 44699845 -50572806 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 926 27 29 0 0 chr17 44701852 44701886 -50570765 + AT_rich Low_complexity Low_complexity 1 34 0 3 926 1795 192 9 50 chr17 44704271 44704726 -50567925 + RMER10A LTR ERVL 1 436 -6 3 926 288 220 187 18 chr17 44704760 44704931 -50567720 + Cheshire DNA MER1_type 74 273 -2147 3 926 329 317 158 18 chr17 44705599 44705827 -50566824 + B4 SINE B4 2 261 -31 3 926 196 365 15 45 chr17 44707102 44707234 -50565417 - MIRc SINE MIR -125 143 16 3 926 853 272 110 26 chr17 44708178 44708244 -50564407 + MTEa LTR MaLR 44 106 -273 3 926 198 0 0 0 chr17 44708244 44708266 -50564385 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 3 926 853 272 110 26 chr17 44708266 44708508 -50564143 + MTEa LTR MaLR 107 377 -2 3 926 1893 232 51 32 chr17 44709663 44710193 -50562458 + L1MA6 LINE L1 5426 5965 -335 4 926 809 193 29 0 chr17 44710493 44710633 -50562018 + B1_Mus1 SINE Alu 2 145 -3 4 926 874 230 43 14 chr17 44710642 44710849 -50561802 + B3 SINE B2 3 215 -1 4 926 551 314 64 90 chr17 44711023 44711446 -50561205 + L1MEd LINE L1 345 756 -5363 4 926 225 297 0 19 chr17 44711785 44711888 -50560763 + L1MEd LINE L1 1150 1250 -4869 4 926 210 192 0 19 chr17 44712290 44712343 -50560308 + (TTAA)n Simple_repeat Simple_repeat 2 53 0 4 926 360 0 0 0 chr17 44712471 44712511 -50560140 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 926 409 298 43 0 chr17 44712533 44712674 -50559977 - B3A SINE B2 -18 180 34 4 926 325 304 0 0 chr17 44713211 44713290 -50559361 + RSINE1 SINE B4 87 165 0 4 926 477 0 0 0 chr17 44713322 44713375 -50559276 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 4 926 912 128 0 0 chr17 44713375 44713553 -50559098 + (CATA)n Simple_repeat Simple_repeat 2 180 0 4 926 556 182 120 32 chr17 44713754 44713879 -50558772 + B1_Mur1 SINE Alu 7 142 -7 4 926 425 329 86 10 chr17 44714053 44714262 -50558389 - B4 SINE B4 -63 229 5 4 926 469 264 113 13 chr17 44716276 44716506 -50556145 + B4A SINE B4 1 253 -39 4 926 748 10 10 20 chr17 44718497 44718595 -50554056 + (TAGA)n Simple_repeat Simple_repeat 1 97 0 4 926 577 322 46 18 chr17 44718891 44719172 -50553479 + B4A SINE B4 2 290 -2 4 926 870 183 30 104 chr17 44719806 44720007 -50552644 + B3 SINE B2 10 195 0 4 926 482 114 0 12 chr17 44720039 44720119 -50552532 + (TCC)n Simple_repeat Simple_repeat 2 80 0 4 926 1317 270 65 13 chr17 44720163 44720550 -50552101 - MTD LTR MaLR 0 419 13 4 926 23 0 0 0 chr17 44720605 44720628 -50552023 + AT_rich Low_complexity Low_complexity 1 23 0 4 926 234 0 0 0 chr17 44721218 44721244 -50551407 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 4 926 378 0 0 0 chr17 44721316 44721358 -50551293 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 4 926 260 352 85 32 chr17 44721956 44722144 -50550507 + MIRc SINE MIR 52 249 -19 4 926 337 322 78 0 chr17 44723393 44723508 -50549143 + MLT1G LTR MaLR 27 150 -441 4 926 273 239 65 0 chr17 44723583 44723675 -50548976 + MLT1G LTR MaLR 315 412 -179 4 926 596 234 115 40 chr17 44723758 44723932 -50548719 - B4 SINE B4 0 292 106 4 926 228 295 52 87 chr17 44723833 44723948 -50548703 - PB1D10 SINE Alu -6 111 1 4 926 231 261 114 14 chr17 44724010 44724080 -50548571 + MLT1G LTR MaLR 469 545 -46 4 926 388 306 127 20 chr17 44725662 44725859 -50546792 + MLT1H1 LTR MaLR 68 285 -306 4 926 280 162 26 26 chr17 44725868 44725944 -50546707 + GA-rich Low_complexity Low_complexity 6 81 0 4 926 425 323 54 39 chr17 44726001 44726204 -50546447 + MLT1H1 LTR MaLR 341 546 -9 4 926 1121 271 3 51 chr17 44727641 44727885 -50544766 + B4 SINE B4 15 255 -37 4 926 261 83 0 0 chr17 44727885 44727921 -50544730 + (TCTG)n Simple_repeat Simple_repeat 4 39 0 4 926 1186 49 7 0 chr17 44727921 44728065 -50544586 - B1_Mus2 SINE Alu -1 146 2 4 926 1121 271 3 51 chr17 44728065 44728111 -50544540 + B4 SINE B4 256 291 -1 4 926 796 264 45 0 chr17 44728245 44728446 -50544205 + B3 SINE B2 5 214 -2 4 926 333 136 0 0 chr17 44728700 44728766 -50543885 + (GA)n Simple_repeat Simple_repeat 2 67 0 4 926 195 266 100 60 chr17 44731723 44731823 -50540828 + MIR SINE MIR 41 144 -64 4 926 305 255 114 43 chr17 44731947 44732124 -50540527 - MIRc SINE MIR -82 186 1 4 926 414 0 0 0 chr17 44732367 44732413 -50540238 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 926 630 313 51 40 chr17 44732463 44732716 -50539935 - B4A SINE B4 0 292 37 4 926 348 24 0 0 chr17 44732927 44732968 -50539683 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 926 279 0 0 0 chr17 44733400 44733431 -50539220 + (T)n Simple_repeat Simple_repeat 1 31 0 4 926 329 256 0 95 chr17 44733663 44733810 -50538841 + BC1_Mm scRNA scRNA 2 134 -18 4 926 214 345 32 32 chr17 44733997 44734103 -50538548 - MIRb SINE MIR 0 268 157 4 926 266 243 186 0 chr17 44734135 44734205 -50538446 + MIRb SINE MIR 26 108 -160 4 926 258 32 0 0 chr17 44735535 44735566 -50537085 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 4 926 192 97 0 0 chr17 44735700 44735731 -50536920 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 926 393 22 0 0 chr17 44735731 44735776 -50536875 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 926 297 0 0 0 chr17 44736394 44736427 -50536224 + (TTG)n Simple_repeat Simple_repeat 1 33 0 4 926 727 271 40 47 chr17 44736935 44737210 -50535441 + B4A SINE B4 2 274 -18 4 926 201 175 25 0 chr17 44737243 44737283 -50535368 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 926 22 35 0 0 chr17 44737322 44737351 -50535300 + AT_rich Low_complexity Low_complexity 1 29 0 4 926 264 386 0 0 chr17 44739104 44739280 -50533371 + (CCA)n Simple_repeat Simple_repeat 2 177 0 4 926 250 392 0 0 chr17 44739285 44739532 -50533119 + (CCA)n Simple_repeat Simple_repeat 1 247 0 4 926 267 381 0 0 chr17 44739545 44739721 -50532930 + (CCA)n Simple_repeat Simple_repeat 2 177 0 4 926 229 272 0 44 chr17 44739638 44739819 -50532832 + (TCCA)n Simple_repeat Simple_repeat 2 174 0 4 926 347 279 168 7 chr17 44739872 44740009 -50532642 + MER20 DNA MER1_type 41 199 -20 4 926 22 0 0 0 chr17 44740123 44740145 -50532506 + AT_rich Low_complexity Low_complexity 1 22 0 4 926 207 0 0 0 chr17 44741221 44741244 -50531407 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 926 786 97 0 0 chr17 44742052 44742165 -50530486 + (GAA)n Simple_repeat Simple_repeat 1 113 0 4 926 21 0 0 0 chr17 44743996 44744017 -50528634 + AT_rich Low_complexity Low_complexity 1 21 0 4 926 22 0 0 0 chr17 44745401 44745423 -50527228 + AT_rich Low_complexity Low_complexity 1 22 0 4 926 180 0 0 0 chr17 44745660 44745680 -50526971 + (CCA)n Simple_repeat Simple_repeat 2 21 0 4 926 180 237 0 119 chr17 44745721 44745788 -50526863 - L3 LINE CR1 -2217 2272 2214 4 926 999 58 0 0 chr17 44746819 44746958 -50525693 + (CAGCC)n Simple_repeat Simple_repeat 1 139 0 4 926 288 111 185 0 chr17 44747030 44747084 -50525567 + MIR3 SINE MIR 122 185 -23 4 926 184 206 0 0 chr17 44747056 44747090 -50525561 + L3 LINE CR1 4443 4476 -13 4 926 195 42 0 0 chr17 44748499 44748523 -50524128 + (A)n Simple_repeat Simple_repeat 1 24 0 4 926 407 296 48 27 chr17 44748980 44749126 -50523525 + B1F1 SINE Alu 1 149 0 4 926 193 255 149 0 chr17 44749409 44749456 -50523195 - MIR3 SINE MIR -46 162 109 4 926 254 379 35 21 chr17 44749772 44749915 -50522736 + MamSINE1 SINE tRNA 34 178 -112 4 926 435 63 0 0 chr17 44750371 44750434 -50522217 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 926 212 284 0 147 chr17 44750509 44750604 -50522047 - ID4 SINE ID -2 81 1 4 926 21 0 0 0 chr17 44751009 44751030 -50521621 + AT_rich Low_complexity Low_complexity 1 21 0 4 926 250 216 88 81 chr17 44751505 44751660 -50520991 + B3 SINE B2 1 215 -1 4 926 278 0 54 0 chr17 44751680 44751717 -50520934 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 926 484 276 36 29 chr17 44751722 44751860 -50520791 + B1F SINE Alu 11 149 0 4 926 225 305 12 24 chr17 44752357 44752441 -50520210 + ID4 SINE ID 1 83 0 4 926 593 246 65 93 chr17 44753031 44753278 -50519373 + L1M2 LINE L1 5549 5788 -512 4 926 265 214 118 89 chr17 44753370 44753539 -50519112 + L1_Mus1 LINE L1 5750 5955 -201 4 926 672 172 0 0 chr17 44754041 44754215 -50518436 + (TG)n Simple_repeat Simple_repeat 2 175 0 4 926 573 247 211 29 chr17 44754218 44754464 -50518187 - B4A SINE B4 0 292 2 4 926 288 0 0 0 chr17 44754819 44754851 -50517800 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 926 225 0 0 0 chr17 44755528 44755553 -50517098 + (A)n Simple_repeat Simple_repeat 1 25 0 4 926 198 167 0 0 chr17 44755996 44756032 -50516619 + CT-rich Low_complexity Low_complexity 3 38 0 4 926 1675 199 38 41 chr17 44757422 44757789 -50514862 + ORR1D2 LTR MaLR 5 370 0 4 926 208 286 0 16 chr17 44758067 44758131 -50514520 + CT-rich Low_complexity Low_complexity 2 64 0 4 926 380 211 0 27 chr17 44758132 44758205 -50514446 - ID4_ SINE ID -11 72 2 4 926 2290 78 62 0 chr17 44759038 44759346 -50513305 + ORR1A2 LTR MaLR 1 327 0 4 926 185 268 0 0 chr17 44759395 44759436 -50513215 - MIRc SINE MIR -71 197 157 4 926 1693 246 46 5 chr17 44759634 44760023 -50512628 - MTD LTR MaLR -14 405 1 4 926 343 228 24 102 chr17 44760037 44760164 -50512487 + PB1D10 SINE Alu 1 117 0 4 926 360 0 0 0 chr17 44760857 44760897 -50511754 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 926 679 308 53 32 chr17 44761302 44761587 -50511064 + B4A SINE B4 1 291 -1 4 926 569 270 70 52 chr17 44762542 44762749 -50509902 + B4A SINE B4 1 222 -2 4 926 230 329 14 14 chr17 44762864 44762938 -50509713 + B4A SINE B4 217 290 -2 4 926 591 60 0 0 chr17 44762971 44763055 -50509596 + (CA)n Simple_repeat Simple_repeat 2 85 0 4 926 21 0 0 0 chr17 44763065 44763086 -50509565 + AT_rich Low_complexity Low_complexity 1 21 0 4 926 957 277 72 33 chr17 44763616 44763975 -50508676 + MTE2b LTR MaLR 4 376 -3 4 926 219 196 0 42 chr17 44763976 44764024 -50508627 + GA-rich Low_complexity Low_complexity 4 49 0 4 926 424 291 44 26 chr17 44764025 44764138 -50508513 - RSINE1 SINE B4 -33 132 18 4 926 375 261 149 25 chr17 44764905 44765066 -50507585 + B3A SINE B2 2 182 -16 4 926 438 219 64 24 chr17 44765199 44765304 -50507347 - PB1 SINE Alu 0 120 23 4 926 1740 217 95 16 chr17 44766773 44767161 -50505490 + MTD LTR MaLR 1 419 0 4 926 192 77 0 0 chr17 44768909 44768935 -50503716 + (CCTG)n Simple_repeat Simple_repeat 1 26 0 4 926 317 211 0 0 chr17 44768967 44769019 -50503632 - RSINE1 SINE B4 -26 139 88 4 926 486 0 0 0 chr17 44769754 44769808 -50502843 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 926 597 288 135 33 chr17 44769944 44770307 -50502344 + L1MC2 LINE L1 5937 6336 -8 5 926 207 0 0 0 chr17 44770326 44770349 -50502302 + (CATA)n Simple_repeat Simple_repeat 2 24 0 5 926 194 108 0 51 chr17 44772146 44772185 -50500466 + GA-rich Low_complexity Low_complexity 1 37 0 5 926 432 0 0 0 chr17 44774771 44774819 -50497832 + (TC)n Simple_repeat Simple_repeat 2 49 0 5 926 797 260 33 9 chr17 44774828 44775038 -50497613 - B3 SINE B2 0 216 2 5 926 241 226 0 0 chr17 44775668 44775721 -50496930 + GA-rich Low_complexity Low_complexity 1 53 0 5 926 363 44 0 0 chr17 44777006 44777051 -50495600 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 926 572 0 15 0 chr17 44777678 44777746 -50494905 + (TC)n Simple_repeat Simple_repeat 2 70 0 5 926 517 258 0 0 chr17 44777971 44778091 -50494560 - 5S rRNA rRNA 0 121 2 5 926 423 0 0 0 chr17 44778429 44778476 -50494175 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 926 445 255 37 61 chr17 44778477 44778640 -50494011 - B3A SINE B2 -38 160 2 5 926 1846 202 95 55 chr17 44779678 44780150 -50492501 + Lx5 LINE L1 6549 7039 -11 5 926 525 32 0 0 chr17 44780158 44780221 -50492430 + (TG)n Simple_repeat Simple_repeat 1 63 0 5 926 228 86 0 0 chr17 44780223 44780258 -50492393 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 926 217 250 52 34 chr17 44780521 44780628 -50492023 + MIRc SINE MIR 95 199 -77 5 926 336 241 0 0 chr17 44781879 44781995 -50490656 + (TG)n Simple_repeat Simple_repeat 1 116 0 5 926 756 163 0 0 chr17 44782016 44782169 -50490482 + (TG)n Simple_repeat Simple_repeat 2 154 0 5 926 755 219 88 0 chr17 44782638 44782830 -50489821 - B3 SINE B2 -2 214 6 5 926 228 379 65 56 chr17 44785718 44786148 -50486503 - L2b LINE L2 -32 3343 2910 5 926 549 44 0 0 chr17 44786650 44786718 -50485933 + (TG)n Simple_repeat Simple_repeat 2 69 0 5 926 213 180 0 39 chr17 44788152 44788204 -50484447 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 5 926 196 265 125 19 chr17 44789944 44790048 -50482603 + MIR SINE MIR 146 260 -2 5 926 1039 82 0 70 chr17 44793444 44793602 -50479049 - B1_Mus1 SINE Alu -1 147 1 5 926 570 195 220 24 chr17 44793718 44793886 -50478765 + B3 SINE B2 6 206 -10 5 926 423 0 0 0 chr17 44794052 44794099 -50478552 + (TC)n Simple_repeat Simple_repeat 1 47 0 5 926 303 104 0 0 chr17 44794099 44794146 -50478505 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 926 27 0 0 0 chr17 44794376 44794403 -50478248 + AT_rich Low_complexity Low_complexity 1 27 0 5 926 259 333 15 15 chr17 44796133 44796267 -50476384 + GA-rich Low_complexity Low_complexity 3 136 0 5 926 384 200 18 9 chr17 44796467 44796578 -50476073 + GA-rich Low_complexity Low_complexity 3 114 0 5 926 202 194 0 0 chr17 44796580 44796616 -50476035 + (CAGA)n Simple_repeat Simple_repeat 2 37 0 5 926 768 130 0 0 chr17 44797933 44798094 -50474557 + (TC)n Simple_repeat Simple_repeat 2 162 0 5 926 261 0 0 0 chr17 44798094 44798123 -50474528 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 926 724 281 27 27 chr17 44798908 44799144 -50473507 + B4A SINE B4 33 271 -21 5 926 324 0 0 0 chr17 44799144 44799180 -50473471 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 926 724 281 27 27 chr17 44799180 44799203 -50473448 + B4A SINE B4 272 292 0 5 926 253 379 15 25 chr17 44799484 44799687 -50472964 + L2a LINE L2 2318 2518 -901 5 926 232 336 102 36 chr17 44799926 44800215 -50472436 + L2a LINE L2 3079 3413 -13 5 926 224 346 93 0 chr17 44800590 44800697 -50471954 - MIR3 SINE MIR -77 131 15 5 926 618 137 45 15 chr17 44802194 44802327 -50470324 - Lx4A LINE L1 -6 7052 6916 5 926 1791 136 4 7 chr17 44802329 44802604 -50470047 + Lx4A LINE L1 6097 6370 -688 5 926 431 151 0 11 chr17 44805565 44805659 -50466992 + CT-rich Low_complexity Low_complexity 2 94 0 5 926 361 216 153 22 chr17 44805663 44805800 -50466851 - HAL1-3A_ME LINE L1 -420 2438 2284 5 926 311 169 0 66 chr17 44805839 44805915 -50466736 - ID4 SINE ID -11 72 2 5 926 617 256 37 49 chr17 44806014 44806178 -50466473 - RSINE1 SINE B4 -1 164 3 5 926 423 0 0 0 chr17 44808758 44808805 -50463846 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 926 1002 223 22 112 chr17 44810625 44811035 -50461616 - Lx9 LINE L1 -9 7635 7263 5 926 942 71 0 0 chr17 44812363 44812490 -50460161 + (GGA)n Simple_repeat Simple_repeat 3 129 0 5 926 491 269 42 8 chr17 44812594 44812714 -50459937 + B1F1 SINE Alu 2 125 -24 5 926 843 121 13 7 chr17 44812731 44812881 -50459770 + (GGGA)n Simple_repeat Simple_repeat 1 151 0 5 926 222 118 0 0 chr17 44815140 44815174 -50457477 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 926 1148 103 6 0 chr17 44815328 44815502 -50457149 + (GA)n Simple_repeat Simple_repeat 2 176 0 5 926 630 237 27 38 chr17 44815766 44815950 -50456701 + B3A SINE B2 1 182 -16 5 926 520 120 0 24 chr17 44815969 44816054 -50456597 + MTC LTR MaLR 338 420 -1 5 926 5372 180 94 44 chr17 44816054 44817102 -50455549 + MTC-int LTR MaLR 2 1094 -164 5 926 1250 48 0 0 chr17 44817102 44817249 -50455402 - B1_Mus1 SINE Alu 0 148 2 5 926 5372 180 94 44 chr17 44817249 44817397 -50455254 + MTC-int LTR MaLR 1095 1258 0 5 926 2019 170 32 136 chr17 44817397 44817867 -50454784 + MTC LTR MaLR 1 421 0 5 926 218 231 0 0 chr17 44818304 44818343 -50454308 + ID4 SINE ID 29 67 -16 5 926 263 247 11 0 chr17 44818405 44818494 -50454157 + GA-rich Low_complexity Low_complexity 2 91 0 5 926 239 250 85 24 chr17 44818937 44819019 -50453632 - ID SINE ID -137 87 1 5 926 614 312 40 51 chr17 44821543 44821938 -50450713 + MER20B DNA MER1_type 393 783 0 5 926 429 109 0 0 chr17 44823403 44823467 -50449184 + (TG)n Simple_repeat Simple_repeat 1 64 0 5 926 531 203 11 17 chr17 44823542 44823722 -50448929 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 926 411 325 76 61 chr17 44823729 44823991 -50448660 - B4 SINE B4 0 292 27 5 926 527 268 82 0 chr17 44825144 44825310 -50447341 - B3A SINE B2 -38 178 2 5 926 494 244 163 0 chr17 44825930 44826053 -50446598 + B1_Mur1 SINE Alu 1 143 -6 5 927 376 292 102 86 chr17 44829125 44829200 -50443451 + RMER30 DNA MER1_type 12 84 -118 5 927 518 0 0 16 chr17 44829200 44829263 -50443388 + (GGAA)n Simple_repeat Simple_repeat 2 63 0 5 927 518 289 5 56 chr17 44829263 44829461 -50443190 + B3A SINE B2 5 192 -6 5 927 376 292 102 86 chr17 44829461 44829571 -50443080 + RMER30 DNA MER1_type 85 200 -2 5 927 211 354 104 20 chr17 44829616 44829948 -50442703 + L2b LINE L2 2929 3291 -135 5 927 486 242 122 122 chr17 44830017 44830157 -50442494 + Lx8 LINE L1 6884 7017 -456 5 927 1181 56 0 0 chr17 44830157 44830300 -50442351 + B1_Mus2 SINE Alu 2 144 -3 5 927 486 242 122 122 chr17 44830300 44830512 -50442139 + Lx8 LINE L1 7018 7236 -237 5 927 908 88 0 39 chr17 44830512 44830665 -50441986 - B1_Mus1 SINE Alu 0 148 2 5 927 292 262 48 160 chr17 44830666 44830916 -50441735 + Lx8 LINE L1 7225 7446 -27 5 927 901 84 0 40 chr17 44830936 44831084 -50441567 + L1Md_F2 LINE L1 6439 6580 -2 5 927 31 0 0 0 chr17 44831103 44831134 -50441517 + AT_rich Low_complexity Low_complexity 1 31 0 5 927 30 59 0 0 chr17 44831558 44831609 -50441042 + AT_rich Low_complexity Low_complexity 1 51 0 5 927 350 86 0 33 chr17 44831821 44831881 -50440770 + (AGGGGG)n Simple_repeat Simple_repeat 5 62 0 5 927 781 113 0 8 chr17 44832325 44832459 -50440192 + URR1B DNA MER1_type 83 215 -10 5 927 456 256 73 125 chr17 44832465 44832657 -50439994 + B4 SINE B4 111 292 0 5 927 641 207 7 0 chr17 44832866 44833006 -50439645 - B1_Mur4 SINE Alu -9 141 1 5 927 371 192 14 0 chr17 44833183 44833256 -50439395 + 4.5SRNA scRNA scRNA 4 77 -17 5 927 432 0 0 0 chr17 44833872 44833920 -50438731 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 927 771 298 29 110 chr17 44835554 44835962 -50436689 + MTEa LTR MaLR 5 379 0 5 927 489 204 185 60 chr17 44836445 44836747 -50435904 - RLTR15 LTR ERVK -18 341 2 5 927 216 277 31 0 chr17 44837191 44837256 -50435395 + B1F SINE Alu 68 134 -15 5 927 249 119 0 0 chr17 44837697 44837739 -50434912 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 927 896 251 45 31 chr17 44838023 44838311 -50434340 + B4A SINE B4 1 292 0 5 927 345 197 0 0 chr17 44838335 44838411 -50434240 + (CA)n Simple_repeat Simple_repeat 1 76 0 5 927 411 298 98 49 chr17 44839742 44840007 -50432644 + B4 SINE B4 1 278 -14 5 927 336 48 0 0 chr17 44840023 44840065 -50432586 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 927 709 276 41 22 chr17 44840824 44841143 -50431508 - L3b LINE CR1 -152 330 6 5 927 279 243 221 18 chr17 44842092 44842205 -50430446 - ID_B1 SINE B4 -88 136 1 5 927 264 154 0 0 chr17 44842338 44842390 -50430261 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 927 714 248 13 65 chr17 44842734 44842963 -50429688 - ID_B1 SINE B4 -3 221 5 5 927 968 208 44 19 chr17 44843002 44843208 -50429443 - B3 SINE B2 -5 211 1 5 927 188 325 110 31 chr17 44843612 44843739 -50428912 + MIR3 SINE MIR 7 143 -65 5 927 201 39 0 0 chr17 44845565 44845591 -50427060 + (A)n Simple_repeat Simple_repeat 1 26 0 5 927 180 0 0 0 chr17 44845888 44845908 -50426743 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 5 927 24 0 0 0 chr17 44847236 44847260 -50425391 + AT_rich Low_complexity Low_complexity 1 24 0 5 927 410 293 281 9 chr17 44847419 44847643 -50425008 + B4A SINE B4 2 286 -6 5 927 234 62 0 0 chr17 44847752 44847784 -50424867 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 927 267 164 0 0 chr17 44847831 44847892 -50424759 + (CAGA)n Simple_repeat Simple_repeat 4 64 0 5 927 692 245 5 67 chr17 44848416 44848626 -50424025 + B3A SINE B2 2 198 0 5 927 323 351 25 41 chr17 44849462 44849658 -50422993 + MLT1H LTR MaLR 108 300 -249 5 927 253 320 31 28 chr17 44849708 44849866 -50422785 + MLT1H LTR MaLR 270 419 -70 5 927 653 283 42 11 chr17 44851617 44851806 -50420845 - B3A SINE B2 -2 196 2 5 927 392 271 9 0 chr17 44851806 44851906 -50420745 + MER58A DNA MER1_type 54 154 -70 5 927 420 20 0 0 chr17 44852764 44852813 -50419838 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 927 207 0 0 0 chr17 44852813 44852835 -50419816 + (GA)n Simple_repeat Simple_repeat 2 24 0 6 927 276 53 0 0 chr17 44853692 44853730 -50418921 + (A)n Simple_repeat Simple_repeat 1 38 0 6 927 339 130 0 0 chr17 44854455 44854509 -50418142 + (CCCCCA)n Simple_repeat Simple_repeat 1 54 0 6 927 435 283 84 13 chr17 44855704 44855858 -50416793 - MIRb SINE MIR -66 202 38 6 927 227 271 186 0 chr17 44855863 44855933 -50416718 + ID4_ SINE ID 1 83 0 6 927 266 221 44 9 chr17 44855934 44856048 -50416603 + GA-rich Low_complexity Low_complexity 2 119 0 6 927 392 253 0 38 chr17 44856074 44856259 -50416392 + G-rich Low_complexity Low_complexity 3 180 0 6 927 792 162 286 6 chr17 44857081 44857249 -50415402 + B3 SINE B2 2 216 0 6 927 207 0 0 0 chr17 44857291 44857314 -50415337 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 927 1029 199 5 37 chr17 44857623 44857837 -50414814 - B3 SINE B2 -9 207 1 6 927 310 291 160 57 chr17 44857938 44857998 -50414653 + B4A SINE B4 4 81 -211 6 927 483 18 0 0 chr17 44857998 44858054 -50414597 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 927 310 291 160 57 chr17 44858054 44858255 -50414396 + B4A SINE B4 82 292 0 6 927 806 154 7 0 chr17 44858593 44858742 -50413909 + GA-rich Low_complexity Low_complexity 2 151 0 6 927 235 0 57 0 chr17 44859019 44859054 -50413597 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 6 927 25 0 0 0 chr17 44859652 44859677 -50412974 + AT_rich Low_complexity Low_complexity 1 25 0 6 927 793 94 8 16 chr17 44860769 44860898 -50411753 + Lx LINE L1 6520 6647 -7 6 927 207 0 0 0 chr17 44861175 44861198 -50411453 + (A)n Simple_repeat Simple_repeat 1 23 0 6 927 452 267 45 68 chr17 44862279 44862456 -50410195 + B4A SINE B4 24 196 -96 6 927 388 277 45 0 chr17 44862492 44862604 -50410047 + RSINE1 SINE B4 15 131 -34 6 927 282 236 0 18 chr17 44862643 44862699 -50409952 + B4A SINE B4 218 272 -20 6 927 402 21 0 0 chr17 44862740 44862787 -50409864 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 927 488 93 0 13 chr17 44862791 44862867 -50409784 + (AGGGGG)n Simple_repeat Simple_repeat 5 79 0 6 927 634 306 76 8 chr17 44863116 44863379 -50409272 + B4 SINE B4 4 284 -8 6 927 807 87 164 16 chr17 44864465 44864593 -50408058 + B1_Mus1 SINE Alu 2 148 0 6 927 456 19 0 0 chr17 44864593 44864646 -50408005 + (CATA)n Simple_repeat Simple_repeat 2 54 0 6 927 264 336 23 70 chr17 44864649 44864777 -50407874 + B4A SINE B4 1 122 -170 6 927 759 226 0 0 chr17 44864994 44865508 -50407143 + (TG)n Simple_repeat Simple_repeat 1 514 0 6 927 29 0 0 0 chr17 44866345 44866374 -50406277 + AT_rich Low_complexity Low_complexity 1 29 0 6 927 841 181 6 6 chr17 44867014 44867192 -50405459 + GA-rich Low_complexity Low_complexity 1 178 0 6 927 210 107 0 0 chr17 44867192 44867220 -50405431 + (GA)n Simple_repeat Simple_repeat 1 28 0 6 927 387 182 0 0 chr17 44868240 44868317 -50404334 + (TA)n Simple_repeat Simple_repeat 2 78 0 6 927 21 0 0 0 chr17 44868662 44868683 -50403968 + AT_rich Low_complexity Low_complexity 1 21 0 6 927 221 139 23 0 chr17 44870821 44870864 -50401787 + CT-rich Low_complexity Low_complexity 1 44 0 6 927 830 131 0 7 chr17 44872336 44872482 -50400169 + (CTG)n Simple_repeat Simple_repeat 3 147 0 6 927 269 336 0 9 chr17 44872612 44872717 -50399934 + G-rich Low_complexity Low_complexity 2 105 0 6 927 249 109 0 0 chr17 44874180 44874226 -50398425 + (T)n Simple_repeat Simple_repeat 1 46 0 6 927 180 0 0 0 chr17 44875131 44875151 -50397500 + (CCG)n Simple_repeat Simple_repeat 2 21 0 6 927 635 307 39 32 chr17 44876491 44876770 -50395881 + B4 SINE B4 2 282 -10 6 927 351 0 0 0 chr17 44876773 44876812 -50395839 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 927 229 271 18 49 chr17 44876853 44877016 -50395635 + (CA)n Simple_repeat Simple_repeat 2 159 0 6 927 587 81 10 0 chr17 44877228 44877327 -50395324 + (TC)n Simple_repeat Simple_repeat 1 100 0 6 927 927 219 34 19 chr17 44877901 44878110 -50394541 - B3 SINE B2 0 216 5 6 927 1238 104 35 0 chr17 44878205 44878378 -50394273 + B2_Mm1t SINE B2 1 179 -14 6 927 1168 75 0 7 chr17 44878378 44878526 -50394125 + B1_Mus1 SINE Alu 2 148 0 6 927 448 284 112 10 chr17 44879887 44880083 -50392568 + LTR41 LTR ERVL 6 221 -547 6 927 402 21 0 0 chr17 44880089 44880136 -50392515 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 927 365 292 29 14 chr17 44880565 44880704 -50391947 - B1F SINE Alu -7 142 2 6 927 468 153 0 0 chr17 44880715 44880800 -50391851 + CT-rich Low_complexity Low_complexity 1 85 0 6 927 454 270 173 6 chr17 44880849 44881028 -50391623 - B3 SINE B2 -7 209 1 6 927 344 228 65 8 chr17 44881031 44881155 -50391496 + LTR41 LTR ERVL 618 748 -20 6 927 28 48 0 0 chr17 44881651 44881693 -50390958 + AT_rich Low_complexity Low_complexity 1 42 0 6 927 1215 104 27 6 chr17 44881887 44882070 -50390581 + B2_Mm2 SINE B2 1 187 -8 6 927 247 301 44 0 chr17 44882100 44882213 -50390438 + MER103 DNA DNA 24 141 -25 6 927 360 0 0 0 chr17 44882269 44882309 -50390342 + (TTGG)n Simple_repeat Simple_repeat 1 40 0 6 927 1192 48 0 33 chr17 44882730 44882867 -50389784 + B1_Mus2 SINE Alu 1 135 -12 6 927 270 0 0 0 chr17 44882867 44882897 -50389754 + (CAA)n Simple_repeat Simple_repeat 2 31 0 6 927 1192 48 0 33 chr17 44882897 44882911 -50389740 + B1_Mus2 SINE Alu 136 147 0 6 927 255 61 0 0 chr17 44883247 44883280 -50389371 + (CCCCCA)n Simple_repeat Simple_repeat 3 35 0 6 927 679 259 87 73 chr17 44884771 44884992 -50387659 + B4A SINE B4 2 244 -48 6 927 3616 139 122 100 chr17 44884992 44885879 -50386772 + RMER17A2 LTR ERVK 1 906 0 6 927 679 259 87 73 chr17 44885879 44885944 -50386707 + B4A SINE B4 245 292 0 6 927 223 157 0 28 chr17 44886045 44886117 -50386534 + (CA)n Simple_repeat Simple_repeat 1 70 0 6 927 455 162 0 10 chr17 44886191 44886291 -50386360 + (CA)n Simple_repeat Simple_repeat 1 99 0 6 927 695 201 7 27 chr17 44886309 44886457 -50386194 - B1_Mur2 SINE Alu 0 149 5 6 927 446 292 99 27 chr17 44886515 44886849 -50385802 + Charlie2b DNA MER1_type 2342 2699 -83 6 927 288 354 46 54 chr17 44886916 44887176 -50385475 - LTR33A LTR ERVL -98 422 165 6 927 255 79 0 0 chr17 44887302 44887340 -50385311 + (CAGAGA)n Simple_repeat Simple_repeat 3 40 0 6 927 426 198 16 16 chr17 44887350 44887478 -50385173 + GA-rich Low_complexity Low_complexity 3 130 0 6 927 1234 220 63 43 chr17 44887651 44888186 -50384465 + L1MB5 LINE L1 4924 5472 -702 6 927 948 173 0 0 chr17 44888345 44888524 -50384127 + (TG)n Simple_repeat Simple_repeat 2 180 0 6 927 753 269 5 14 chr17 44888636 44888858 -50383793 + L1MB5 LINE L1 5465 5684 -494 6 927 250 174 0 42 chr17 44888955 44889027 -50383624 + (TATATG)n Simple_repeat Simple_repeat 4 72 0 6 927 297 154 63 28 chr17 44889054 44889156 -50383495 + L1MB5 LINE L1 5833 5936 -242 6 927 271 239 28 0 chr17 44889175 44889246 -50383405 + (CATATA)n Simple_repeat Simple_repeat 6 78 0 6 927 316 234 111 21 chr17 44889389 44889533 -50383118 + L1MB8 LINE L1 5711 5867 -311 6 927 727 271 31 20 chr17 44889536 44889710 -50382941 + B3A SINE B2 1 178 -20 6 927 324 0 0 0 chr17 44889710 44889746 -50382905 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 927 2042 154 5 96 chr17 44889746 44890162 -50382489 + ORR1C1 LTR MaLR 1 378 0 6 927 727 271 31 20 chr17 44890162 44890182 -50382469 + B3A SINE B2 179 197 -1 6 927 1782 186 75 31 chr17 44890278 44890638 -50382013 - MTD LTR MaLR -15 404 29 6 927 280 200 224 0 chr17 44890713 44890798 -50381853 + L1MB8 LINE L1 5932 6035 -149 6 927 448 250 176 8 chr17 44890893 44891018 -50381633 - B3 SINE B2 -13 203 58 6 927 613 296 0 38 chr17 44891060 44891218 -50381433 + RSINE1 SINE B4 6 157 -8 6 927 284 64 0 21 chr17 44891353 44891401 -50381250 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 6 927 1696 21 0 0 chr17 44891443 44891635 -50381016 - B2_Mm1a SINE B2 0 193 2 6 927 256 214 250 0 chr17 44892240 44892296 -50380355 - ID4_ SINE ID -10 73 4 6 927 306 0 0 0 chr17 44892732 44892766 -50379885 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 6 927 1173 56 0 7 chr17 44892766 44892910 -50379741 - B1_Mus1 SINE Alu -4 144 2 6 927 469 284 0 0 chr17 44893728 44893844 -50378807 + ID_B1 SINE B4 82 197 -27 6 927 306 0 0 0 chr17 44894214 44894248 -50378403 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 927 749 243 40 0 chr17 44894278 44894451 -50378200 - B3A SINE B2 -18 180 1 6 927 398 263 296 30 chr17 44894694 44894893 -50377758 - MER2 DNA MER2_type -4 341 90 6 927 298 370 23 46 chr17 44894976 44895149 -50377502 + LTR85a LTR Gypsy? 523 691 -11 6 927 333 227 14 7 chr17 44895230 44895372 -50377279 + GA-rich Low_complexity Low_complexity 1 143 0 6 927 255 292 10 40 chr17 44895436 44895536 -50377115 + CT-rich Low_complexity Low_complexity 3 99 0 6 927 1075 58 0 7 chr17 44896088 44896226 -50376425 - B1_Mus2 SINE Alu -10 137 1 6 927 1609 241 105 27 chr17 44896234 44896711 -50375940 + RCHARR1 DNA MER1_type 4 517 -457 6 927 669 196 8 8 chr17 44896739 44896873 -50375778 + B1_Mur1 SINE Alu 16 149 0 6 927 507 259 14 7 chr17 44896856 44896996 -50375655 + RCHARR1 DNA MER1_type 511 651 -323 6 927 474 233 17 59 chr17 44897000 44897148 -50375503 - B1_Mur1 SINE Alu 0 149 3 6 927 613 214 38 11 chr17 44897192 44897376 -50375275 + RCHARR1 DNA MER1_type 711 899 -75 6 927 21 0 0 0 chr17 44897404 44897425 -50375226 + AT_rich Low_complexity Low_complexity 1 21 0 6 927 1924 200 70 39 chr17 44897449 44898059 -50374592 + ORR1B1 LTR MaLR 1 390 -4 6 927 252 261 15 0 chr17 44898537 44898602 -50374049 + (TATG)n Simple_repeat Simple_repeat 4 69 0 6 927 1025 292 37 7 chr17 44898616 44898885 -50373766 - B4A SINE B4 -14 278 2 6 927 335 278 33 11 chr17 44899416 44899507 -50373144 + PB1 SINE Alu 34 126 -1 6 927 1436 249 50 27 chr17 44899572 44900126 -50372525 + L1MB7 LINE L1 5328 5888 -296 6 927 2917 102 2 29 chr17 44900250 44900703 -50371948 + BGLII_B LTR ERVK 1 441 0 6 927 230 332 94 70 chr17 44900825 44901081 -50371570 + MTEb LTR MaLR 114 375 -4 6 927 446 323 39 1 chr17 44901092 44901322 -50371329 + L1MB7 LINE L1 5924 6163 -15 6 927 395 336 0 0 chr17 44901511 44901624 -50371027 + PB1D10 SINE Alu 1 113 -4 6 927 21 0 0 0 chr17 44901683 44901704 -50370947 + AT_rich Low_complexity Low_complexity 1 21 0 7 927 967 174 19 65 chr17 44901791 44901911 -50370740 + MTC LTR MaLR 3 120 -287 7 927 4005 41 12 14 chr17 44901911 44902405 -50370246 + MT2_Mm LTR ERVL 1 493 0 7 927 967 174 19 65 chr17 44902405 44902499 -50370152 + MTC LTR MaLR 121 207 -200 7 927 1070 64 7 0 chr17 44902494 44902635 -50370016 + B1_Mus1 SINE Alu 6 147 -1 7 927 366 123 0 0 chr17 44902660 44902717 -50369934 + (GAAA)n Simple_repeat Simple_repeat 2 58 0 7 927 1007 162 147 0 chr17 44902717 44902914 -50369737 + MTC LTR MaLR 196 421 0 7 927 272 344 21 10 chr17 44904335 44904432 -50368219 - MamRep605 Unknown Unknown -383 493 396 7 927 621 302 56 44 chr17 44904893 44905163 -50367488 - Charlie22a DNA MER1_type -101 390 118 7 927 362 282 36 9 chr17 44905607 44905718 -50366933 - MER5A DNA MER1_type -21 168 55 7 927 216 0 0 0 chr17 44906540 44906564 -50366087 + (T)n Simple_repeat Simple_repeat 1 24 0 7 927 1589 241 61 6 chr17 44906647 44906990 -50365661 + ORR1D2 LTR MaLR 1 362 -8 7 927 245 311 0 32 chr17 44907052 44907145 -50365506 + L2b LINE L2 2391 2480 -939 7 927 353 22 0 21 chr17 44907222 44907269 -50365382 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 927 451 315 34 101 chr17 44907280 44907577 -50365074 - B4A SINE B4 -14 278 2 7 927 538 311 129 13 chr17 44908521 44908830 -50363821 + LTR85a LTR Gypsy? 348 692 -10 7 927 375 266 85 92 chr17 44908997 44909138 -50363513 + B1F SINE Alu 5 144 -5 7 927 201 74 0 0 chr17 44909139 44909166 -50363485 + (AGGGGG)n Simple_repeat Simple_repeat 2 28 0 7 927 180 0 0 0 chr17 44909533 44909553 -50363098 + (TA)n Simple_repeat Simple_repeat 2 21 0 7 927 241 402 73 45 chr17 44910085 44910525 -50362126 + L2b LINE L2 2923 3374 -1 7 927 693 260 25 30 chr17 44910780 44910978 -50361673 - B3 SINE B2 -19 197 1 7 927 236 279 0 29 chr17 44911345 44911415 -50361236 - MIRm SINE MIR -108 168 101 7 927 600 272 77 119 chr17 44911919 44912349 -50360302 - RMER10A LTR ERVL -19 423 12 7 927 210 71 0 0 chr17 44912507 44912535 -50360116 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 7 927 2384 79 22 0 chr17 44912997 44913315 -50359336 + ORR1A2 LTR MaLR 1 325 -2 7 927 197 83 28 0 chr17 44913329 44913365 -50359286 + (TAA)n Simple_repeat Simple_repeat 2 38 0 7 927 287 253 31 31 chr17 44915262 44915360 -50357291 + MER3 DNA MER1_type 3 100 -109 7 927 220 337 36 12 chr17 44916035 44916058 -50356593 - BC1_Mm scRNA scRNA -53 99 14 7 927 335 246 0 0 chr17 44916058 44916119 -50356532 - ID SINE ID -150 74 14 7 927 236 333 15 0 chr17 44916060 44916126 -50356525 - tRNA-Thr-ACY_ tRNA tRNA -10 67 1 7 927 225 268 108 56 chr17 44917102 44917273 -50355378 - MIRb SINE MIR -50 218 37 7 927 612 168 0 0 chr17 44917615 44917740 -50354911 + CT-rich Low_complexity Low_complexity 2 126 0 7 927 1129 239 12 21 chr17 44918059 44918302 -50354349 + MTEa LTR MaLR 1 241 -138 7 927 473 257 154 0 chr17 44918328 44918464 -50354187 + MTEa LTR MaLR 210 366 -13 7 927 547 200 32 40 chr17 44918468 44918593 -50354058 + MTEa-int LTR MaLR 1 124 -1456 7 927 24 32 0 0 chr17 44919319 44919350 -50353301 + AT_rich Low_complexity Low_complexity 1 31 0 7 927 334 272 151 8 chr17 44920377 44920503 -50352148 + ID_B1 SINE B4 81 224 0 7 927 294 287 69 10 chr17 44921408 44921510 -50351141 - MIR SINE MIR -69 139 32 7 927 195 42 0 0 chr17 44922457 44922481 -50350170 + (T)n Simple_repeat Simple_repeat 1 24 0 7 927 1214 48 0 0 chr17 44922481 44922628 -50350023 - B1_Mus1 SINE Alu 0 148 2 7 927 238 278 31 82 chr17 44922706 44922804 -50349847 - B4A SINE B4 -5 287 195 7 927 475 298 60 16 chr17 44922953 44923137 -50349514 - B4A SINE B4 -99 193 2 7 927 995 75 0 14 chr17 44924018 44924166 -50348485 + L1_Mus1 LINE L1 6422 6567 0 7 927 407 235 139 5 chr17 44924752 44924953 -50347698 - Charlie1b DNA MER1_type -10 513 286 7 927 26 0 0 0 chr17 44925119 44925145 -50347506 + AT_rich Low_complexity Low_complexity 1 26 0 7 927 252 345 34 22 chr17 44925482 44925571 -50347080 + Cheshire DNA MER1_type 195 284 -2136 7 927 1118 213 10 0 chr17 44926535 44926742 -50345909 - B3 SINE B2 -4 212 4 7 927 22 35 0 0 chr17 44926892 44926921 -50345730 + AT_rich Low_complexity Low_complexity 1 29 0 7 927 438 350 70 44 chr17 44927427 44927875 -50344776 - L1M5 LINE L1 -1091 5052 4585 7 927 21 0 0 0 chr17 44929489 44929510 -50343141 + AT_rich Low_complexity Low_complexity 1 21 0 7 927 1497 144 199 9 chr17 44931387 44931709 -50340942 + ORR1C2 LTR MaLR 1 383 -1 7 927 36 0 0 0 chr17 44932120 44932156 -50340495 + AT_rich Low_complexity Low_complexity 1 36 0 7 927 1190 61 0 0 chr17 44932157 44932304 -50340347 - B1_Mus1 SINE Alu 0 148 2 7 927 3793 125 100 24 chr17 44934052 44934755 -50337896 + RMER6A LTR ERVK 1 756 0 7 927 988 134 138 10 chr17 44934795 44934991 -50337660 - URR1B DNA MER1_type 0 225 5 7 927 306 167 15 0 chr17 44938004 44938070 -50334581 + (CTG)n Simple_repeat Simple_repeat 3 69 0 7 927 269 215 35 81 chr17 44938796 44938882 -50333769 - ID4 SINE ID -1 82 1 7 927 369 0 0 0 chr17 44938891 44938932 -50333719 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 927 191 247 130 33 chr17 44940097 44940189 -50332462 + MIRb SINE MIR 134 234 -34 7 927 402 101 0 0 chr17 44941696 44941765 -50330886 + (GA)n Simple_repeat Simple_repeat 1 69 0 7 927 22 35 0 0 chr17 44943195 44943224 -50329427 + AT_rich Low_complexity Low_complexity 1 29 0 7 927 215 250 31 0 chr17 44944300 44944364 -50328287 - ID4 SINE ID 0 83 18 7 927 230 73 24 0 chr17 44944509 44944550 -50328101 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 7 927 29 0 0 0 chr17 44945162 44945191 -50327460 + AT_rich Low_complexity Low_complexity 1 29 0 7 927 216 67 0 0 chr17 44948932 44948962 -50323689 + (TCCC)n Simple_repeat Simple_repeat 1 30 0 7 927 26 0 0 0 chr17 44950394 44950420 -50322231 + AT_rich Low_complexity Low_complexity 1 26 0 7 927 337 330 9 19 chr17 44951705 44951813 -50320838 + polypyrimidine Low_complexity Low_complexity 4 110 0 7 927 420 158 0 0 chr17 44951827 44951903 -50320748 + CT-rich Low_complexity Low_complexity 2 77 0 7 927 225 281 36 12 chr17 44952057 44952140 -50320511 + CT-rich Low_complexity Low_complexity 3 87 0 7 927 248 337 0 29 chr17 44955324 44955428 -50317223 + C-rich Low_complexity Low_complexity 5 105 0 7 928 330 182 0 0 chr17 44958125 44958191 -50314460 + A-rich Low_complexity Low_complexity 1 66 0 7 928 795 152 72 0 chr17 44958555 44958693 -50313958 + B1_Mus1 SINE Alu 1 148 0 7 928 407 148 37 0 chr17 44958693 44958774 -50313877 + A-rich Low_complexity Low_complexity 2 85 0 7 928 943 212 22 5 chr17 44959154 44959339 -50313312 + B3 SINE B2 29 216 0 7 928 586 250 70 18 chr17 44959502 44959673 -50312978 - MER58A DNA MER1_type 0 224 45 7 928 446 88 0 14 chr17 44960237 44960306 -50312345 + (TATG)n Simple_repeat Simple_repeat 3 70 0 7 928 500 307 72 13 chr17 44960331 44960483 -50312168 - B3A SINE B2 -30 168 8 7 928 326 306 132 51 chr17 44961424 44961720 -50310931 + L1MC2 LINE L1 6001 6320 -24 7 928 245 137 0 38 chr17 44961879 44961932 -50310719 + C-rich Low_complexity Low_complexity 5 55 0 7 928 890 283 52 34 chr17 44961974 44962420 -50310231 - L1MCa LINE L1 -2177 4144 3691 7 928 556 240 25 19 chr17 44962544 44962701 -50309950 + MTD LTR MaLR 1 158 -261 7 928 630 234 58 0 chr17 44962731 44962868 -50309783 + MTD LTR MaLR 275 419 0 7 928 312 27 0 0 chr17 44963193 44963230 -50309421 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 928 408 302 104 55 chr17 44963232 44963740 -50308911 - L1MCa LINE L1 -5152 1356 824 7 928 1376 150 101 16 chr17 44963741 44963999 -50308652 - Lx3C LINE L1 0 6976 6697 7 928 208 135 0 0 chr17 44964023 44964060 -50308591 + (T)n Simple_repeat Simple_repeat 1 37 0 7 928 235 231 62 0 chr17 44964340 44964405 -50308246 - L1M3 LINE L1 -1814 4329 4261 7 928 358 297 12 94 chr17 44964423 44964583 -50308068 - B1F SINE Alu 0 149 3 7 928 443 267 8 48 chr17 44964460 44964586 -50308065 - ID_B1 SINE B4 -23 201 81 7 928 854 274 53 145 chr17 44964586 44965544 -50307107 - L1M3 LINE L1 -1875 4265 3396 7 928 7582 153 31 9 chr17 44965668 44966973 -50305678 - Lx2 LINE L1 -1 6996 5663 7 928 244 216 0 238 chr17 44967106 44967121 -50305530 - B2_Mm2 SINE B2 -1 194 180 7 928 3141 49 15 0 chr17 44967121 44967510 -50305141 - L1_Mus1 LINE L1 0 6567 6173 7 928 683 183 81 22 chr17 44967510 44967658 -50304993 - B3 SINE B2 -1 215 70 7 928 387 0 0 0 chr17 44967691 44967734 -50304917 + (TC)n Simple_repeat Simple_repeat 2 44 0 7 928 240 35 0 0 chr17 44967734 44967762 -50304889 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 928 430 174 21 109 chr17 44968310 44968503 -50304148 + RMER17C LTR ERVK 99 274 -136 7 928 3491 61 22 2 chr17 44968607 44969067 -50303584 - L1_Mus3 LINE L1 -7 6631 6163 7 928 233 275 14 97 chr17 44969102 44969247 -50303404 - L1MB2 LINE L1 -53 6118 5986 7 928 332 273 36 9 chr17 44969705 44969816 -50302835 - L1M4 LINE L1 -539 5645 5532 7 928 584 297 46 26 chr17 44971802 44971954 -50300697 + RSINE1 SINE B4 11 165 0 7 928 721 210 21 14 chr17 44972002 44972142 -50300509 + B1F SINE Alu 3 143 -6 7 928 191 114 29 0 chr17 44972142 44972177 -50300474 + (CAA)n Simple_repeat Simple_repeat 1 36 0 7 928 522 191 127 42 chr17 44972319 44972461 -50300190 + RSINE1 SINE B4 12 165 0 7 928 297 387 68 61 chr17 44972809 44973219 -50299432 - L2 LINE L2 -635 2784 2372 7 928 246 216 97 18 chr17 44973292 44973405 -50299246 - L1M5 LINE L1 -238 5886 5765 7 928 261 0 0 0 chr17 44976238 44976267 -50296384 + (T)n Simple_repeat Simple_repeat 1 29 0 7 928 617 276 28 17 chr17 44980050 44980227 -50292424 - B3A SINE B2 -18 180 2 7 928 879 197 159 5 chr17 44980544 44980758 -50291893 + MTD LTR MaLR 10 256 -163 7 928 194 0 39 0 chr17 44980800 44980826 -50291825 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 7 928 281 211 79 59 chr17 44982324 44982425 -50290226 + B1F SINE Alu 38 140 -9 8 928 405 0 0 0 chr17 44982446 44982491 -50290160 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 928 456 362 51 73 chr17 44982533 44982888 -50289763 - HAL1 LINE L1 -1743 764 418 8 928 246 308 37 133 chr17 44983206 44983528 -50289123 - L1M5 LINE L1 -524 5655 5365 8 928 672 301 101 60 chr17 44983670 44983963 -50288688 - L1MD LINE L1 -923 5223 4943 8 928 776 239 48 24 chr17 44983963 44984173 -50288478 - B3 SINE B2 0 216 2 8 928 672 301 101 60 chr17 44984173 44984570 -50288081 - L1MD LINE L1 -1204 4942 4487 8 928 605 104 56 19 chr17 44984570 44984678 -50287973 - Lx3C LINE L1 -2 6974 6863 8 928 672 301 101 60 chr17 44984678 44985004 -50287647 - L1MD LINE L1 -1660 4486 4164 8 928 305 353 73 23 chr17 44985036 44985213 -50287438 - L1MC LINE L1 -1949 4197 4012 8 928 271 314 61 18 chr17 44985284 44985514 -50287137 - L1MD LINE L1 -2217 3929 3689 8 928 219 36 0 0 chr17 44985552 44985580 -50287071 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 8 928 553 273 170 31 chr17 44985852 44986306 -50286345 - L1MD LINE L1 -2728 3418 2902 8 928 289 297 9 0 chr17 44986293 44986404 -50286247 - L1MD LINE L1 -3364 2782 2671 8 928 2973 52 42 3 chr17 44986581 44986966 -50285685 - MTB LTR MaLR 0 400 1 8 928 351 0 0 0 chr17 44987095 44987134 -50285517 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 928 435 303 37 0 chr17 44987621 44987730 -50284921 + B1F SINE Alu 1 113 -36 8 928 423 0 0 0 chr17 44988595 44988642 -50284009 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 8 928 225 0 0 0 chr17 44988645 44988670 -50283981 + (TG)n Simple_repeat Simple_repeat 2 26 0 8 928 493 225 117 0 chr17 44988680 44988791 -50283860 - RSINE1 SINE B4 -36 129 6 8 928 24833 18 1 0 chr17 44989803 44993381 -50279270 - L1Md_T LINE L1 0 6582 3003 8 928 2112 164 174 27 chr17 44993536 44994024 -50278627 - RLTR20B2 LTR ERVK 0 560 1 8 928 216 0 0 0 chr17 44995430 44995454 -50277197 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 8 928 313 264 88 0 chr17 44995462 44995553 -50277098 - PB1D10 SINE Alu 0 117 19 8 928 927 226 9 46 chr17 44996444 44996662 -50275989 - B3 SINE B2 -5 211 2 8 928 467 274 99 99 chr17 44996871 44997163 -50275488 - B4A SINE B4 0 292 1 8 928 1074 58 0 7 chr17 44997939 44998079 -50274572 - B1_Mus1 SINE Alu -9 139 1 8 928 837 254 15 15 chr17 44998280 44998480 -50274171 - B4A SINE B4 -92 200 1 8 928 729 361 34 31 chr17 44999181 44999530 -50273121 + MLT1D LTR MaLR 1 350 -155 8 928 354 304 9 38 chr17 44999579 44999685 -50272966 + RSINE1 SINE B4 44 146 -19 8 928 1393 173 0 0 chr17 45001053 45001278 -50271373 - URR1B DNA MER1_type 0 225 1 1 928 234 81 0 0 chr17 45001293 45001330 -50271321 + (A)n Simple_repeat Simple_repeat 1 37 0 2 928 200 34 0 33 chr17 45002244 45002274 -50270377 + (GGA)n Simple_repeat Simple_repeat 2 30 0 3 928 246 125 0 0 chr17 45004554 45004602 -50268049 + (T)n Simple_repeat Simple_repeat 1 48 0 4 928 28 0 0 0 chr17 45006058 45006086 -50266565 + AT_rich Low_complexity Low_complexity 1 28 0 5 928 228 221 145 14 chr17 45007781 45007850 -50264801 - PB1 SINE Alu -3 124 47 6 928 193 292 92 20 chr17 45007966 45008064 -50264587 - L3 LINE CR1 -1295 3194 3090 7 928 963 274 123 0 chr17 45009790 45010042 -50262609 - B4A SINE B4 -2 290 8 8 928 564 191 14 81 chr17 45010580 45010728 -50261923 - B1_Mur1 SINE Alu -8 141 4 9 928 382 162 0 14 chr17 45011269 45011338 -50261313 - RLTR16 LTR ERVK 0 505 438 1 928 439 68 17 0 chr17 45011370 45011429 -50261222 + RLTR16 LTR ERVK 1 60 -445 1 928 25 31 0 0 chr17 45012274 45012306 -50260345 + AT_rich Low_complexity Low_complexity 1 32 0 1 928 625 258 27 33 chr17 45012428 45012612 -50260039 - B3A SINE B2 -15 183 1 1 928 1016 88 0 0 chr17 45013482 45013618 -50259033 + B1_Mus1 SINE Alu 1 136 -12 1 928 520 216 9 0 chr17 45013655 45013771 -50258880 + MTD LTR MaLR 1 117 -302 1 928 34 65 0 0 chr17 45013775 45013837 -50258814 + AT_rich Low_complexity Low_complexity 1 62 0 1 928 407 262 48 19 chr17 45014248 45014393 -50258258 - L1MA4 LINE L1 -354 5946 5801 1 928 553 238 39 71 chr17 45014475 45014629 -50258022 - B1_Mur1 SINE Alu 0 149 1 1 928 260 243 37 73 chr17 45015705 45015869 -50256782 + (CACCC)n Simple_repeat Simple_repeat 5 162 0 1 928 985 201 38 57 chr17 45016373 45016584 -50256067 - B3 SINE B2 -9 207 1 2 928 1866 143 125 6 chr17 45019287 45019639 -50253012 + ORR1B1 LTR MaLR 1 394 0 2 928 23 0 0 0 chr17 45021224 45021247 -50251404 + AT_rich Low_complexity Low_complexity 1 23 0 2 928 242 216 0 19 chr17 45021851 45021903 -50250748 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 928 23 33 0 0 chr17 45022505 45022535 -50250116 + AT_rich Low_complexity Low_complexity 1 30 0 2 928 611 225 7 98 chr17 45022921 45023074 -50249577 - B3 SINE B2 -76 140 2 2 928 296 320 24 0 chr17 45023343 45023468 -50249183 - ORR1E LTR MaLR 0 379 252 2 928 493 302 37 108 chr17 45023487 45023728 -50248923 - ORR1E LTR MaLR -121 238 15 2 928 240 35 0 0 chr17 45023941 45023970 -50248681 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 2 928 308 255 0 69 chr17 45024315 45024416 -50248235 - Lx9 LINE L1 -269 7375 7282 2 928 674 256 78 34 chr17 45024417 45024623 -50248028 - B4A SINE B4 -70 222 8 2 928 2890 41 3 0 chr17 45025823 45026168 -50246483 + ORR1A0 LTR MaLR 1 346 0 3 928 419 307 222 6 chr17 45026272 45026452 -50246199 - ID_B1 SINE B4 -3 221 3 3 928 516 311 49 0 chr17 45026459 45026623 -50246028 - ID_B1 SINE B4 -1 223 52 3 928 482 273 25 0 chr17 45026726 45026847 -50245804 + B3A SINE B2 2 125 -73 3 928 261 118 0 0 chr17 45026857 45026908 -50245743 + (TCTCTG)n Simple_repeat Simple_repeat 2 52 0 3 928 3442 23 4 139 chr17 45027478 45027982 -50244669 - RLTR10C LTR ERVK 0 436 1 3 928 435 379 95 14 chr17 45028236 45028458 -50244193 - Arthur1 DNA Tip100 -3466 481 242 3 928 189 0 0 0 chr17 45028870 45028891 -50243760 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3 928 1064 52 0 7 chr17 45028891 45029028 -50243623 - B1_Mus2 SINE Alu -10 137 2 3 928 918 69 131 0 chr17 45029378 45029508 -50243143 - B1_Mus2 SINE Alu 0 147 1 3 928 735 261 111 61 chr17 45029633 45029894 -50242757 - B4 SINE B4 0 292 19 4 928 360 0 0 0 chr17 45030110 45030150 -50242501 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 928 317 191 0 146 chr17 45030365 45030475 -50242176 - PB1D10 SINE Alu -16 101 8 4 928 656 274 0 13 chr17 45031666 45031825 -50240826 - B3A SINE B2 -41 157 1 4 928 570 243 28 7 chr17 45031879 45032020 -50240631 - B1_Mur1 SINE Alu -1 148 5 4 928 381 228 49 10 chr17 45033362 45033464 -50239187 - PB1D7 SINE Alu -14 106 1 4 928 270 373 0 0 chr17 45033661 45033736 -50238915 - ID4 SINE ID -7 76 2 4 928 292 389 30 0 chr17 45033741 45033872 -50238779 - L2 LINE L2 -770 2649 2515 4 928 278 292 84 52 chr17 45034084 45034239 -50238412 - L2 LINE L2 -1175 2244 2085 4 928 620 288 60 68 chr17 45034252 45034487 -50238164 + B4 SINE B4 50 282 -10 4 928 622 302 47 0 chr17 45034786 45034955 -50237696 + B3A SINE B2 1 177 -21 4 928 396 0 0 0 chr17 45034959 45035003 -50237648 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 928 643 275 125 0 chr17 45035036 45035196 -50237455 + B3 SINE B2 9 188 -28 5 928 1045 214 16 91 chr17 45036074 45036375 -50236276 - ORR1C1 LTR MaLR -86 288 1 5 928 449 304 127 0 chr17 45036375 45036531 -50236120 + B4A SINE B4 21 196 -96 5 928 207 0 0 0 chr17 45036959 45036982 -50235669 + (TCTG)n Simple_repeat Simple_repeat 1 23 0 5 928 417 70 0 0 chr17 45036982 45037039 -50235612 + (TCCA)n Simple_repeat Simple_repeat 4 60 0 5 928 260 341 70 16 chr17 45037318 45037446 -50235205 + MIRc SINE MIR 17 151 -117 5 928 21 0 0 0 chr17 45037767 45037788 -50234863 + AT_rich Low_complexity Low_complexity 1 21 0 5 928 3442 23 2 0 chr17 45037990 45038385 -50234266 + MTA_Mm LTR MaLR 1 396 0 5 928 290 260 238 84 chr17 45039488 45039631 -50233020 + RSINE1 SINE B4 1 165 0 5 928 234 0 0 0 chr17 45039631 45039657 -50232994 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 928 320 330 36 18 chr17 45039678 45039897 -50232754 + L1M4 LINE L1 4691 4913 -1233 6 928 203 237 0 0 chr17 45039908 45039946 -50232705 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 928 360 255 33 4 chr17 45039998 45040156 -50232495 + L1M4 LINE L1 5296 5462 -982 6 928 736 310 64 42 chr17 45040629 45040942 -50231709 - MER2 DNA MER2_type -3 342 23 6 928 2299 211 19 60 chr17 45041105 45041635 -50231016 - RLTR18B LTR ERVK 0 512 5 6 928 279 71 0 0 chr17 45041675 45041717 -50230934 + (TC)n Simple_repeat Simple_repeat 2 43 0 6 928 374 303 48 14 chr17 45041748 45041895 -50230756 + MIR SINE MIR 82 233 -29 6 928 297 0 0 0 chr17 45043076 45043109 -50229542 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 928 317 316 249 26 chr17 45043227 45043500 -50229151 - Zaphod DNA Tip100 -3518 513 180 6 928 1367 38 0 0 chr17 45044029 45044189 -50228462 + L1Md_F3 LINE L1 5427 5586 -297 6 928 8269 25 4 11 chr17 45044189 45045180 -50227471 + L1Md_F3 LINE L1 5587 6570 -14 6 928 306 102 0 0 chr17 45045216 45045228 -50227423 + (T)n Simple_repeat Simple_repeat 1 12 0 7 928 1141 75 0 0 chr17 45045228 45045375 -50227276 - B1_Mm SINE Alu 0 147 1 7 928 306 102 0 0 chr17 45045375 45045411 -50227240 + (T)n Simple_repeat Simple_repeat 1 36 0 7 928 627 278 39 117 chr17 45045718 45046027 -50226624 - B4A SINE B4 0 292 8 7 928 250 221 125 23 chr17 45046495 45046583 -50226068 - MLT1B LTR MaLR 0 467 371 7 928 558 279 21 28 chr17 45046583 45046727 -50225924 + ID_B1 SINE B4 82 224 0 7 928 391 319 105 38 chr17 45046737 45047004 -50225647 - MLT1B LTR MaLR -130 337 53 7 928 1422 216 126 5 chr17 45047004 45047376 -50225275 - MTD LTR MaLR 0 419 3 7 928 219 109 43 0 chr17 45048419 45048465 -50224186 + T-rich Low_complexity Low_complexity 1 48 0 7 928 462 282 63 0 chr17 45048543 45048717 -50223934 - Lx9 LINE L1 -186 7458 7274 7 928 343 318 251 0 chr17 45049557 45049736 -50222915 + MER2 DNA MER2_type 119 342 -3 7 928 335 255 131 10 chr17 45050609 45050708 -50221943 - PB1D10 SINE Alu 0 117 7 8 928 195 350 145 35 chr17 45050808 45050953 -50221698 + L3 LINE CR1 3319 3479 -1010 8 928 325 316 70 48 chr17 45051567 45051753 -50220898 + L1MB7 LINE L1 5970 6159 -25 8 928 453 36 0 0 chr17 45051763 45051818 -50220833 + (TA)n Simple_repeat Simple_repeat 2 56 0 8 928 4076 153 6 34 chr17 45052261 45053037 -50219614 + L1Md_A LINE L1 590 1344 -5380 8 928 10562 67 12 0 chr17 45055356 45056817 -50215834 + L1Md_F2 LINE L1 4109 5586 -297 8 928 7930 51 2 3 chr17 45056817 45057813 -50214838 + L1Md_F2 LINE L1 5587 6581 -1 8 928 1646 64 0 0 chr17 45058514 45058733 -50213918 + L1Md_F2 LINE L1 6364 6582 0 8 928 1316 203 43 18 chr17 45059633 45059914 -50212737 - ORR1B1 LTR MaLR 0 394 107 8 928 281 265 123 58 chr17 45060494 45060754 -50211897 - L1MC4a LINE L1 -62 7820 7544 8 928 340 269 112 39 chr17 45061073 45061278 -50211373 - L1MC4a LINE L1 -601 7281 7062 8 928 243 0 0 0 chr17 45061779 45061806 -50210845 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 928 790 339 52 7 chr17 45061970 45062261 -50210390 + Tigger7 DNA MER2_type 7 310 -2181 9 928 5411 109 23 11 chr17 45062374 45063245 -50209406 + L1_Mur1 LINE L1 4806 5686 -200 9 928 29374 120 23 31 chr17 45063426 45069833 -50202818 - L1_Mus2 LINE L1 0 6566 220 9 928 4252 66 11 0 chr17 45070188 45070745 -50201906 + Lx3_Mus LINE L1 6447 7009 0 9 928 25 0 0 0 chr17 45070849 45070874 -50201777 + AT_rich Low_complexity Low_complexity 1 25 0 9 928 2662 144 72 12 chr17 45070891 45071389 -50201262 - RLTR11A LTR ERVK 0 528 1 9 928 328 250 37 5 chr17 45073140 45073253 -50199398 - MTEa LTR MaLR -3 376 262 9 928 24 0 0 0 chr17 45073294 45073318 -50199333 + AT_rich Low_complexity Low_complexity 1 24 0 9 928 617 140 2 5 chr17 45074431 45074542 -50198109 - B1_Mus1 SINE Alu -10 110 2 9 928 431 208 19 68 chr17 45074455 45074558 -50198093 - B4 SINE B4 -118 174 77 9 928 810 0 0 0 chr17 45074755 45074845 -50197806 + (TTCTC)n Simple_repeat Simple_repeat 1 90 0 1 928 1263 81 0 0 chr17 45074847 45075020 -50197631 + (TCCCC)n Simple_repeat Simple_repeat 4 176 0 1 928 191 36 36 0 chr17 45075020 45075048 -50197603 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 1 928 1114 71 0 0 chr17 45075061 45075202 -50197449 - B1_Mus1 SINE Alu -6 142 2 1 928 21 36 0 0 chr17 45075268 45075296 -50197355 + AT_rich Low_complexity Low_complexity 1 28 0 1 928 324 0 0 0 chr17 45075451 45075487 -50197164 - HAL1-3A_ME LINE L1 -843 2015 1980 1 928 303 93 0 0 chr17 45075500 45075543 -50197108 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1 928 567 132 0 0 chr17 45075768 45075859 -50196792 + (CA)n Simple_repeat Simple_repeat 2 92 0 1 928 2369 58 25 17 chr17 45077738 45078077 -50194574 - Lx3_Mus LINE L1 -857 6152 5808 1 928 5613 81 38 0 chr17 45078077 45078843 -50193808 + Lx3_Mus LINE L1 6215 7009 0 1 928 2369 58 25 17 chr17 45078843 45078856 -50193795 - Lx3_Mus LINE L1 -1202 5807 5797 1 928 556 267 0 25 chr17 45079348 45079467 -50193184 + RSINE1 SINE B4 3 118 -47 1 928 288 0 0 0 chr17 45079489 45079521 -50193130 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 928 465 206 180 27 chr17 45080591 45080741 -50191910 + B3 SINE B2 2 174 -42 1 928 343 286 18 9 chr17 45081193 45081306 -50191345 - PB1D7 SINE Alu -2 118 5 1 928 340 284 48 10 chr17 45081440 45081543 -50191108 - PB1D10 SINE Alu -8 109 3 1 928 729 249 124 11 chr17 45082606 45083101 -50189550 - RCHARR1 DNA MER1_type 0 974 331 1 928 445 331 7 27 chr17 45083164 45083310 -50189341 - RCHARR1 DNA MER1_type -772 202 60 1 928 909 188 78 0 chr17 45083528 45083720 -50188931 - B3 SINE B2 -7 209 3 1 928 1031 304 672 42 chr17 45083820 45083862 -50188789 + ORR1D1 LTR MaLR 42 114 -260 1 928 1026 47 0 0 chr17 45083862 45083990 -50188661 + (TCCC)n Simple_repeat Simple_repeat 3 130 0 1 928 1031 191 87 31 chr17 45083990 45084235 -50188416 + ORR1D1 LTR MaLR 115 374 0 1 928 994 271 111 19 chr17 45084235 45084724 -50187927 - Tigger1 DNA MER2_type -1054 1364 771 1 928 1142 76 0 0 chr17 45086141 45086286 -50186365 + B1_Mus2 SINE Alu 1 145 -2 1 928 194 81 27 0 chr17 45086299 45086336 -50186315 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 1 928 30 45 0 0 chr17 45086469 45086513 -50186138 + AT_rich Low_complexity Low_complexity 1 44 0 1 928 2458 170 58 22 chr17 45086756 45087358 -50185293 - Lx6 LINE L1 -965 4915 4292 1 928 3752 179 33 2 chr17 45087361 45088244 -50184407 + Lx6 LINE L1 4937 5896 -1154 1 14 1673 285 49 57 chr17 45088254 45089165 -50183486 + Lx6 LINE L1 6189 7430 -30 1 929 828 261 101 28 chr17 45089272 45089520 -50183131 - B4A SINE B4 -19 273 8 1 929 216 0 0 0 chr17 45089536 45089560 -50183091 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 929 749 77 8 17 chr17 45089564 45089683 -50182968 - L1Md_F2 LINE L1 -6 6576 6459 1 929 983 25 0 0 chr17 45089683 45089802 -50182849 + L1_Mus1 LINE L1 6324 6442 -125 1 929 360 173 0 72 chr17 45090376 45090569 -50182082 + (TA)n Simple_repeat Simple_repeat 2 180 0 1 929 186 189 0 0 chr17 45090599 45090636 -50182015 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 929 21 36 0 0 chr17 45091465 45091493 -50181158 + AT_rich Low_complexity Low_complexity 1 28 0 1 929 242 333 164 0 chr17 45091577 45091766 -50180885 - MER115 DNA Tip100 -67 626 407 1 929 571 289 75 0 chr17 45092489 45092690 -50179961 - B3 SINE B2 0 216 1 1 929 552 286 111 27 chr17 45093356 45093618 -50179033 + B4A SINE B4 1 284 -8 1 929 22 56 0 0 chr17 45093925 45093961 -50178690 + AT_rich Low_complexity Low_complexity 1 36 0 1 929 243 0 0 0 chr17 45095520 45095547 -50177104 + (TTGTG)n Simple_repeat Simple_repeat 4 30 0 1 929 454 273 91 0 chr17 45095583 45095704 -50176947 - ID_B1 SINE B4 -6 218 87 1 929 3113 9 3 0 chr17 45096558 45096903 -50175748 + ORR1A0 LTR MaLR 1 346 0 1 929 298 333 58 0 chr17 45096959 45097079 -50175572 + MIRb SINE MIR 100 226 -42 1 929 348 236 0 0 chr17 45097599 45097688 -50174963 + (TATATG)n Simple_repeat Simple_repeat 2 90 0 1 929 2523 185 75 36 chr17 45097736 45098324 -50174327 + RMER19C LTR ERVK 1 611 0 1 929 408 343 52 0 chr17 45099300 45099434 -50173217 - B3 SINE B2 -14 202 62 1 929 283 345 70 9 chr17 45099501 45099615 -50173036 + ID_B1 SINE B4 102 222 -2 1 929 227 303 15 29 chr17 45099644 45099712 -50172939 + BC1_Mm scRNA scRNA 21 87 -65 1 929 528 263 121 23 chr17 45101260 45101517 -50171134 - Tigger7 DNA MER2_type -1 2490 2209 1 929 268 320 96 10 chr17 45101633 45101737 -50170914 - Tigger7 DNA MER2_type -2309 182 70 1 929 343 248 0 131 chr17 45101764 45101784 -50170867 - MT2B LTR ERVL -314 287 175 1 929 627 200 9 0 chr17 45101784 45101894 -50170757 - B1_Mus2 SINE Alu -26 121 11 1 929 314 274 77 19 chr17 45101802 45101906 -50170745 - B4A SINE B4 -98 194 85 1 929 32 43 0 0 chr17 45101996 45102042 -50170609 + AT_rich Low_complexity Low_complexity 1 46 0 1 929 233 264 0 0 chr17 45102291 45102344 -50170307 + tRNA-Ala-GCY_ tRNA tRNA 3 55 -20 1 929 214 273 45 0 chr17 45102344 45102357 -50170294 + BC1_Mm scRNA scRNA 9 77 -75 1 929 196 167 34 85 chr17 45102477 45102536 -50170115 - MIRc SINE MIR -109 159 104 1 929 388 204 110 37 chr17 45103769 45103932 -50168719 - Lx7 LINE L1 -3 7693 7519 1 929 266 327 83 45 chr17 45104444 45104601 -50168050 - MER34 LTR ERV1 -5 537 375 1 929 189 0 0 0 chr17 45106237 45106258 -50166393 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 929 333 0 0 0 chr17 45106258 45106295 -50166356 + (TTG)n Simple_repeat Simple_repeat 2 38 0 1 929 267 250 0 0 chr17 45106524 45106608 -50166043 + GA-rich Low_complexity Low_complexity 3 86 0 1 929 301 295 110 39 chr17 45106701 45106828 -50165823 + MER21B LTR ERV1 651 786 -77 1 929 292 308 76 17 chr17 45106976 45107095 -50165556 - L2a LINE L2 0 3426 3301 1 929 23 33 0 0 chr17 45108014 45108044 -50164607 + AT_rich Low_complexity Low_complexity 1 30 0 1 929 288 296 75 23 chr17 45108311 45108484 -50164167 + L2 LINE L2 808 989 -2430 1 929 207 268 145 12 chr17 45108711 45108794 -50163857 + L2 LINE L2 1391 1484 -1935 1 929 555 269 108 59 chr17 45108823 45109227 -50163424 - RMER15 LTR ERVL -16 559 11 1 929 3244 23 23 13 chr17 45109424 45109816 -50162835 - MTA_Mm LTR MaLR 0 396 1 1 929 217 278 11 32 chr17 45109964 45110057 -50162594 + CT-rich Low_complexity Low_complexity 2 92 0 1 929 301 236 138 23 chr17 45110993 45111181 -50161470 - L1MA5 LINE L1 -256 6035 5819 1 929 544 244 213 43 chr17 45111452 45111687 -50160964 - MTEa LTR MaLR -26 353 79 1 929 306 274 25 17 chr17 45111732 45111851 -50160800 + (TATATG)n Simple_repeat Simple_repeat 3 122 0 1 929 727 296 81 76 chr17 45111928 45112297 -50160354 + MTE2a LTR MaLR 9 379 0 1 929 252 281 0 0 chr17 45112583 45112647 -50160004 - MARNA DNA Mariner -352 234 171 1 929 24 0 0 0 chr17 45113469 45113493 -50159158 + AT_rich Low_complexity Low_complexity 1 24 0 1 929 181 283 0 36 chr17 45113704 45113759 -50158892 + MIRc SINE MIR 63 115 -153 1 929 342 257 63 18 chr17 45113998 45114109 -50158542 + PB1D7 SINE Alu 4 119 -1 1 929 255 325 40 57 chr17 45114540 45114664 -50157987 - B4A SINE B4 -5 287 166 1 929 234 62 0 0 chr17 45115374 45115406 -50157245 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 929 743 332 56 42 chr17 45115418 45115704 -50156947 - B4A SINE B4 -1 291 2 1 929 3424 23 2 5 chr17 45115840 45116237 -50156414 + MTA_Mm LTR MaLR 1 396 0 1 929 715 135 15 0 chr17 45116303 45116436 -50156215 + GA-rich Low_complexity Low_complexity 2 136 0 1 929 225 178 0 0 chr17 45117086 45117131 -50155520 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 1 929 504 0 0 0 chr17 45117621 45117677 -50154974 + (CTTTG)n Simple_repeat Simple_repeat 3 58 0 1 929 1192 188 0 0 chr17 45118296 45118503 -50154148 - URR1B DNA MER1_type -2 223 17 1 929 397 296 88 42 chr17 45118503 45118536 -50154115 + CYRA11_Mm Unknown Y-chromosome 173 423 -194 1 929 6492 50 8 4 chr17 45119414 45120234 -50152417 - L1Md_F2 LINE L1 -12 6570 5747 1 929 361 269 141 31 chr17 45121791 45121983 -50150668 + B3 SINE B2 4 216 0 1 929 709 256 78 121 chr17 45122028 45122424 -50150227 - MTE2a LTR MaLR 0 379 1 1 929 396 0 0 0 chr17 45123312 45123356 -50149295 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 929 326 122 0 20 chr17 45123376 45123426 -50149225 - B1_Mus1 SINE Alu -99 49 1 1 929 306 304 75 16 chr17 45124137 45124246 -50148405 + B1F1 SINE Alu 9 120 -29 1 929 490 269 15 8 chr17 45124775 45124906 -50147745 + RSINE1 SINE B4 3 134 -31 1 929 26 30 0 0 chr17 45125225 45125258 -50147393 + AT_rich Low_complexity Low_complexity 1 33 0 1 929 506 233 81 24 chr17 45125689 45125812 -50146839 + B1_Mus2 SINE Alu 6 135 -12 1 929 874 270 40 65 chr17 45125820 45126173 -50146478 - Lx5 LINE L1 -35 7015 6672 1 929 1992 230 91 10 chr17 45126208 45126806 -50145845 - Lx5 LINE L1 -738 6722 5860 1 929 180 0 0 0 chr17 45127698 45127718 -50144933 + (TC)n Simple_repeat Simple_repeat 1 20 0 1 929 24 0 0 0 chr17 45130020 45130044 -50142607 + AT_rich Low_complexity Low_complexity 1 24 0 1 929 449 274 9 0 chr17 45130748 45130854 -50141797 + PB1D10 SINE Alu 4 110 -7 1 929 285 288 89 30 chr17 45131582 45131818 -50140833 + L1M4b LINE L1 694 943 -6391 1 929 470 233 175 68 chr17 45131876 45132072 -50140579 + B3A SINE B2 6 216 0 1 929 629 266 48 10 chr17 45132277 45132486 -50140165 + L1M4b LINE L1 1389 1605 -5729 1 929 220 354 92 20 chr17 45132543 45132641 -50140010 + RSINE1 SINE B4 42 146 -19 1 929 225 0 0 0 chr17 45132647 45132672 -50139979 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 929 309 282 32 12 chr17 45132949 45133117 -50139534 + L1M4b LINE L1 1889 2058 -4950 1 929 370 308 58 20 chr17 45133160 45133393 -50139258 + MLT1A LTR MaLR 80 372 -2 1 929 293 324 91 55 chr17 45133419 45134014 -50138637 + L1M4b LINE L1 4906 5521 -1485 1 929 508 319 6 43 chr17 45134451 45134615 -50138036 - RSINE1 SINE B4 -4 161 4 1 929 408 297 118 11 chr17 45134691 45135208 -50137443 + L1M4b LINE L1 5960 6538 -501 1 929 299 320 25 61 chr17 45135480 45135643 -50137008 + RMER30 DNA MER1_type 8 164 -38 2 929 423 289 24 68 chr17 45136262 45136587 -50136064 - B4 SINE B4 -16 276 2 2 929 1283 165 9 5 chr17 45137082 45137301 -50135350 + URR1A DNA MER1_type 6 225 -1 2 929 1445 127 12 16 chr17 45138492 45138740 -50133911 - Lx LINE L1 -6 6648 6402 2 929 277 211 27 53 chr17 45139293 45139368 -50133283 - ID4_ SINE ID -9 74 2 2 929 204 40 0 0 chr17 45139586 45139611 -50133040 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2 929 244 23 93 0 chr17 45142105 45142148 -50130503 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 2 929 383 160 13 0 chr17 45142146 45142221 -50130430 + CT-rich Low_complexity Low_complexity 1 76 0 2 929 288 70 0 0 chr17 45142620 45142663 -50129988 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 2 929 247 200 0 0 chr17 45145122 45145177 -50127474 + T-rich Low_complexity Low_complexity 1 55 0 2 929 314 273 15 0 chr17 45145471 45145537 -50127114 + RSINE1 SINE B4 99 165 0 2 929 768 42 0 0 chr17 45148473 45148569 -50124082 + (TC)n Simple_repeat Simple_repeat 1 96 0 2 929 272 263 140 10 chr17 45148569 45148669 -50123982 + Lx8 LINE L1 6599 6711 -762 2 929 526 284 58 23 chr17 45148696 45148869 -50123782 - B3 SINE B2 -3 213 35 2 929 291 28 0 0 chr17 45148880 45148916 -50123735 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 929 598 267 76 113 chr17 45148924 45149215 -50123436 - B4A SINE B4 -11 281 2 2 929 21 0 0 0 chr17 45149371 45149392 -50123259 + AT_rich Low_complexity Low_complexity 1 21 0 2 929 826 157 163 27 chr17 45150484 45150668 -50121983 - B3 SINE B2 -6 210 2 2 929 546 29 0 0 chr17 45150682 45150750 -50121901 + (TG)n Simple_repeat Simple_repeat 1 68 0 2 929 6893 107 19 10 chr17 45150786 45152036 -50120615 - Lx LINE L1 -2 6652 5391 2 929 584 261 102 5 chr17 45152261 45152422 -50120229 + B3 SINE B2 2 180 -36 2 929 542 96 21 0 chr17 45152422 45152516 -50120135 + (CATA)n Simple_repeat Simple_repeat 3 98 0 2 929 584 261 102 5 chr17 45152516 45152550 -50120101 + B3 SINE B2 181 215 -1 2 929 517 371 82 9 chr17 45153589 45154022 -50118629 + MLT1J LTR MaLR 3 474 -38 2 929 1188 265 37 28 chr17 45155436 45155762 -50116889 + ORR1E LTR MaLR 27 355 -4 2 929 266 121 55 0 chr17 45155798 45155859 -50116792 + L1MD3 LINE L1 7922 7978 -17 2 929 1092 263 51 26 chr17 45156591 45156864 -50115787 + B4 SINE B4 5 284 -8 2 929 362 300 64 7 chr17 45157552 45157693 -50114958 - B1F SINE Alu 0 149 1 2 929 36448 42 0 3 chr17 45157796 45164015 -50108636 - L1Md_T LINE L1 -194 6391 93 2 929 429 36 0 0 chr17 45164547 45164602 -50108049 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 2 929 220 340 144 10 chr17 45164608 45164712 -50107939 + PB1D9 SINE Alu 3 120 0 2 929 477 0 0 0 chr17 45165104 45165157 -50107494 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 929 393 99 37 0 chr17 45166359 45166440 -50106211 + (GGTTG)n Simple_repeat Simple_repeat 2 85 0 2 929 262 309 149 0 chr17 45166474 45166568 -50106083 - PB1D10 SINE Alu -7 110 3 2 929 192 204 78 39 chr17 45166835 45166886 -50105765 + MIRm SINE MIR 111 163 -113 2 929 198 0 0 0 chr17 45166910 45166932 -50105719 + (TTTTTG)n Simple_repeat Simple_repeat 4 25 0 2 929 259 268 50 20 chr17 45167333 45167432 -50105219 + MIR3 SINE MIR 107 208 0 2 929 621 289 46 67 chr17 45168345 45168627 -50104024 + B4 SINE B4 3 278 -14 2 929 372 43 0 0 chr17 45168707 45168753 -50103898 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 929 758 228 64 16 chr17 45169797 45169984 -50102667 - B3A SINE B2 -2 196 1 2 929 180 0 0 0 chr17 45170158 45170178 -50102473 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2 929 21 36 0 0 chr17 45171172 45171200 -50101451 + AT_rich Low_complexity Low_complexity 1 28 0 2 929 674 260 52 6 chr17 45174010 45174184 -50098467 + Lx8 LINE L1 7111 7292 -181 2 929 207 0 0 0 chr17 45174543 45174566 -50098085 + (T)n Simple_repeat Simple_repeat 1 23 0 2 929 1188 96 0 0 chr17 45174566 45174712 -50097939 - B1_Mm SINE Alu 0 147 2 2 929 369 0 0 0 chr17 45178359 45178400 -50094251 + (TTCC)n Simple_repeat Simple_repeat 1 41 0 2 929 541 100 11 11 chr17 45178400 45178491 -50094160 + (TTC)n Simple_repeat Simple_repeat 3 93 0 2 929 471 35 0 0 chr17 45178482 45178539 -50094112 + (TC)n Simple_repeat Simple_repeat 2 58 0 2 929 297 381 6 55 chr17 45178885 45179049 -50093602 - RMER4A LTR ERVK -303 163 8 2 929 1069 46 0 0 chr17 45179158 45179288 -50093363 + B1_Mm SINE Alu 18 147 0 2 929 189 0 0 0 chr17 45179288 45179309 -50093342 + (A)n Simple_repeat Simple_repeat 1 21 0 2 929 397 216 144 0 chr17 45179675 45179772 -50092879 - PB1D10 SINE Alu -6 111 1 2 929 1145 184 9 19 chr17 45179945 45180155 -50092496 - B3 SINE B2 -7 209 2 2 929 336 255 96 12 chr17 45180361 45180561 -50092090 - L1MEf LINE L1 -4615 1585 1337 2 929 624 113 0 0 chr17 45181009 45181106 -50091545 + Lx2 LINE L1 6901 6997 0 2 929 950 193 115 0 chr17 45182861 45183053 -50089598 + B3 SINE B2 2 215 -1 2 929 553 292 328 14 chr17 45183099 45183381 -50089270 - MLT1A LTR MaLR 0 374 4 2 929 233 254 60 0 chr17 45184507 45184574 -50088077 - L1MC LINE L1 -2191 5691 5621 2 929 307 229 29 0 chr17 45186035 45186105 -50086546 - L1MB4 LINE L1 -316 5864 5793 2 929 294 29 0 0 chr17 45186123 45186158 -50086493 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 929 330 87 0 0 chr17 45186163 45186209 -50086442 + (CATA)n Simple_repeat Simple_repeat 1 46 0 2 929 231 269 99 27 chr17 45187340 45187451 -50085200 - Lx6 LINE L1 -30 7430 7312 2 929 986 259 25 48 chr17 45187460 45187776 -50084875 - Lx7 LINE L1 -334 7362 7054 2 929 504 32 0 0 chr17 45188512 45188574 -50084077 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 929 23 0 0 0 chr17 45189722 45189745 -50082906 + AT_rich Low_complexity Low_complexity 1 23 0 2 929 180 0 0 0 chr17 45190340 45190360 -50082291 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2 929 875 213 50 41 chr17 45190370 45190590 -50082061 - ID_B1 SINE B4 -2 222 1 2 929 191 36 0 35 chr17 45192222 45192251 -50080400 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 2 929 243 0 0 0 chr17 45195773 45195800 -50076851 + (T)n Simple_repeat Simple_repeat 1 27 0 2 929 358 289 122 86 chr17 45196182 45196421 -50076230 + L1MB4 LINE L1 5859 6125 -55 2 929 302 198 74 65 chr17 45196421 45196529 -50076122 + PB1D10 SINE Alu 1 109 -8 2 929 358 289 122 86 chr17 45196529 45196592 -50076059 + L1MB4 LINE L1 6126 6172 -8 2 929 426 230 111 63 chr17 45196758 45196895 -50075756 + Zaphod DNA Tip100 585 736 -3295 2 929 816 282 39 0 chr17 45196895 45197101 -50075550 + B3 SINE B2 1 214 -2 2 929 426 230 111 63 chr17 45197101 45197153 -50075498 + Zaphod DNA Tip100 737 783 -3248 2 929 991 270 174 64 chr17 45197214 45197842 -50074809 + Zaphod DNA Tip100 2496 3192 -839 2 929 217 323 0 0 chr17 45198036 45198098 -50074553 + ID4_ SINE ID 11 72 -11 2 929 327 297 0 10 chr17 45198100 45198202 -50074449 + (CA)n Simple_repeat Simple_repeat 2 102 0 2 929 1119 211 34 0 chr17 45198788 45198992 -50073659 - B4 SINE B4 -80 212 2 2 929 313 362 40 13 chr17 45199153 45199304 -50073347 - Tigger5 DNA MER2_type -2233 173 19 2 929 795 279 107 43 chr17 45199339 45199878 -50072773 - L1M2 LINE L1 -726 5577 4977 2 929 234 0 0 0 chr17 45199878 45199904 -50072747 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 2 929 795 289 132 64 chr17 45199904 45200310 -50072341 - L1M2 LINE L1 -1167 4976 4564 2 929 265 264 0 0 chr17 45200410 45200463 -50072188 + B3 SINE B2 8 60 -156 2 929 429 20 0 0 chr17 45200538 45200588 -50072063 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 929 440 325 228 7 chr17 45201608 45201902 -50070749 - MLT1F1 LTR MaLR -22 547 189 2 929 288 294 108 25 chr17 45203461 45203618 -50069033 + MIRb SINE MIR 74 243 -25 2 929 414 0 106 0 chr17 45203633 45203699 -50068952 + (TATAG)n Simple_repeat Simple_repeat 3 75 0 2 929 277 307 87 9 chr17 45205296 45205411 -50067240 + MIR SINE MIR 21 144 -64 2 929 263 275 135 22 chr17 45205585 45205753 -50066898 - MLT1B LTR MaLR -66 342 132 2 929 789 258 5 46 chr17 45206007 45206202 -50066449 + B3A SINE B2 9 195 -3 2 929 868 285 128 16 chr17 45206307 45206745 -50065906 - L1MB4 LINE L1 0 6180 5694 2 929 483 18 0 0 chr17 45206766 45206822 -50065829 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 929 598 268 8 0 chr17 45206823 45206946 -50065705 - RSINE1 SINE B4 -39 126 3 2 929 563 292 45 34 chr17 45206972 45207149 -50065502 - B3A SINE B2 -18 180 2 2 929 336 310 18 0 chr17 45207153 45207266 -50065385 - L1MB4 LINE L1 -476 5704 5590 2 929 237 229 0 20 chr17 45207666 45207715 -50064936 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 929 540 45 0 0 chr17 45208633 45208700 -50063951 + (TGGA)n Simple_repeat Simple_repeat 2 68 0 2 929 698 286 19 75 chr17 45209798 45210066 -50062585 - MER121 Unknown Unknown -57 355 103 2 929 924 182 21 13 chr17 45210846 45211058 -50061593 - B3A SINE B2 -5 211 1 2 929 504 0 0 0 chr17 45211514 45211570 -50061081 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 929 278 227 13 0 chr17 45212253 45212328 -50060323 + CT-rich Low_complexity Low_complexity 1 76 0 2 929 261 0 0 0 chr17 45213215 45213244 -50059407 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2 929 933 233 96 19 chr17 45213244 45213584 -50059067 + MTD LTR MaLR 10 404 -15 2 929 286 264 13 22 chr17 45214016 45214114 -50058537 + MIR SINE MIR 17 115 -153 2 929 264 59 0 0 chr17 45215638 45215672 -50056979 + (ATG)n Simple_repeat Simple_repeat 2 35 0 2 929 435 128 55 0 chr17 45216029 45216138 -50056513 + (TG)n Simple_repeat Simple_repeat 1 115 0 3 929 224 213 0 47 chr17 45216284 45216348 -50056303 + MIR SINE MIR 124 184 -78 2 929 352 285 114 17 chr17 45216359 45216534 -50056117 - LTR48 LTR ERV1 -16 771 580 3 929 24 0 0 0 chr17 45216602 45216626 -50056025 + AT_rich Low_complexity Low_complexity 1 24 0 3 929 1064 227 11 0 chr17 45216637 45216822 -50055829 + B3 SINE B2 8 194 -22 3 929 263 297 67 103 chr17 45216853 45217048 -50055603 - LTR48 LTR ERV1 -183 604 417 3 929 256 327 47 0 chr17 45217076 45217183 -50055468 - LTR48 LTR ERV1 -510 277 166 3 929 265 186 79 38 chr17 45217203 45217302 -50055349 - LTR48 LTR ERV1 -679 108 1 3 929 212 273 0 0 chr17 45217302 45217346 -50055305 + MIR SINE MIR 206 249 -13 2 929 447 19 0 0 chr17 45217625 45217677 -50054974 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 929 750 291 57 5 chr17 45217754 45217965 -50054686 + ID_B1 SINE B4 2 223 -1 3 929 459 0 0 0 chr17 45219622 45219673 -50052978 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 116 1620 178 156 14 chr17 45219673 45220032 -50052619 - MTD LTR MaLR -9 410 1 3 930 856 217 7 19 chr17 45220681 45220836 -50051815 - RSINE1 SINE B4 -10 155 3 3 930 1212 129 119 0 chr17 45222086 45222287 -50050364 - URR1A DNA MER1_type 0 226 2 3 930 184 286 18 0 chr17 45223050 45223106 -50049545 + MIR3 SINE MIR 145 201 -7 3 930 541 241 9 0 chr17 45224264 45224380 -50048271 + PB1D10 SINE Alu 1 117 0 3 930 328 320 109 10 chr17 45224439 45224641 -50048010 + MIRc SINE MIR 5 226 -42 3 930 401 228 0 0 chr17 45224808 45224887 -50047764 + ID4_ SINE ID 3 81 -2 3 930 204 97 0 0 chr17 45225000 45225031 -50047620 + (A)n Simple_repeat Simple_repeat 1 31 0 3 930 217 179 33 82 chr17 45225109 45225170 -50047481 - MER5B DNA MER1_type -113 65 8 3 930 656 186 105 0 chr17 45225749 45225873 -50046778 + B1F2 SINE Alu 1 137 -12 3 930 356 283 82 142 chr17 45226217 45226768 -50045883 - L1ME1 LINE L1 -14 6165 5648 3 930 275 356 70 30 chr17 45226934 45227134 -50045517 - L1ME1 LINE L1 -1077 5069 4862 3 930 374 242 129 51 chr17 45227515 45227744 -50044907 - L1ME1 LINE L1 -1837 4309 4064 3 930 484 172 20 20 chr17 45227770 45227871 -50044780 - L1M3 LINE L1 -2028 4112 4012 3 930 669 267 38 8 chr17 45228034 45228237 -50044414 - B3A SINE B2 -7 209 1 3 930 307 39 0 55 chr17 45228664 45228719 -50043932 + (TTTTG)n Simple_repeat Simple_repeat 2 53 0 3 930 971 72 71 14 chr17 45228733 45228873 -50043778 - B1_Mus1 SINE Alu 0 148 1 3 930 1079 259 67 4 chr17 45229149 45229416 -50043235 + B4A SINE B4 5 288 -4 3 930 536 77 13 0 chr17 45229421 45229499 -50043152 + (CA)n Simple_repeat Simple_repeat 2 80 0 3 930 559 168 92 0 chr17 45230405 45230524 -50042127 - B1_Mur2 SINE Alu -11 138 9 3 930 461 270 194 5 chr17 45231078 45231264 -50041387 + ID_B1 SINE B4 1 221 -3 3 930 21 0 0 0 chr17 45231289 45231310 -50041341 + AT_rich Low_complexity Low_complexity 1 21 0 3 930 870 262 185 3 chr17 45231763 45232104 -50040547 - MLT1C LTR MaLR 0 467 65 3 930 796 279 80 19 chr17 45232230 45232544 -50040107 + Lx8 LINE L1 6932 7264 -209 3 930 267 231 0 15 chr17 45232546 45232612 -50040039 + RMER15 LTR ERVL 403 467 -108 3 930 542 41 14 0 chr17 45235457 45235530 -50037121 + (TGGA)n Simple_repeat Simple_repeat 3 76 0 3 930 270 250 224 70 chr17 45235749 45236016 -50036635 + MTEa LTR MaLR 53 374 -5 3 930 274 288 0 0 chr17 45236025 45236098 -50036553 - L1MA4 LINE L1 -409 5891 5819 3 930 1100 72 0 0 chr17 45236112 45236250 -50036401 + B1_Mus1 SINE Alu 2 139 -9 3 930 2151 279 139 14 chr17 45236270 45237382 -50035269 - L1MA4 LINE L1 -1142 5001 3751 3 930 334 280 80 0 chr17 45238029 45238129 -50034522 + PB1D7 SINE Alu 7 114 -6 3 930 476 242 7 92 chr17 45239625 45239766 -50032885 - B4 SINE B4 -85 207 79 3 930 42124 14 0 3 chr17 45240298 45247870 -50024781 - L1Md_A LINE L1 0 6582 1 3 930 283 299 0 22 chr17 45249970 45250059 -50022592 - L1M2 LINE L1 -1501 5344 5258 3 930 1286 285 129 44 chr17 45250085 45250571 -50022080 - L1M2 LINE L1 -2991 3854 3294 3 930 726 242 94 5 chr17 45250571 45250735 -50021916 + B3 SINE B2 1 181 -35 3 930 315 71 0 0 chr17 45250735 45250777 -50021874 + (CATA)n Simple_repeat Simple_repeat 1 42 0 3 930 726 242 94 5 chr17 45250777 45250803 -50021848 + B3 SINE B2 182 207 -9 3 930 1286 283 114 64 chr17 45250803 45251463 -50021188 - L1M2 LINE L1 -3552 3293 2651 3 930 911 203 28 0 chr17 45251463 45251640 -50021011 - B3A SINE B2 -16 182 1 3 930 808 282 94 92 chr17 45251640 45252407 -50020244 - L1M2 LINE L1 -4199 2650 1859 3 930 3282 98 4 26 chr17 45253653 45254144 -50018507 + Lx2 LINE L1 6166 6645 -352 3 930 1170 155 53 5 chr17 45254142 45254349 -50018302 + Lx2 LINE L1 6775 6991 -6 3 930 1700 153 24 7 chr17 45254355 45254650 -50018001 + ORR1B2 LTR MaLR 19 318 -49 3 930 261 0 0 0 chr17 45256741 45256770 -50015881 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 930 1455 75 0 11 chr17 45258677 45258866 -50013785 + B2_Mm1t SINE B2 1 187 -6 3 930 403 297 143 48 chr17 45260354 45260584 -50012067 + B4A SINE B4 41 292 0 3 930 818 204 34 0 chr17 45261008 45261184 -50011467 + B3 SINE B2 1 182 -34 3 930 283 298 139 24 chr17 45261579 45261907 -50010744 + Lx7 LINE L1 5495 5930 -370 3 930 972 40 0 0 chr17 45262670 45262795 -50009856 + B2_Mm2 SINE B2 1 125 -70 3 930 344 248 195 0 chr17 45262945 45263094 -50009557 - MTEb LTR MaLR -8 371 194 3 930 2064 167 46 3 chr17 45264093 45264484 -50008167 - MTC LTR MaLR -13 408 1 3 930 270 196 0 0 chr17 45264490 45264541 -50008110 - MTEb LTR MaLR -320 59 9 3 930 220 289 11 67 chr17 45265292 45265381 -50007270 + B4 SINE B4 2 85 -207 3 930 733 235 7 0 chr17 45265382 45265535 -50007116 + B3 SINE B2 61 214 -2 3 930 414 328 62 53 chr17 45266497 45266819 -50005832 + L2a LINE L2 3100 3424 -2 3 930 241 300 39 29 chr17 45266969 45267072 -50005579 + RSINE1 SINE B4 12 115 -50 3 930 736 250 38 24 chr17 45267134 45267343 -50005308 + B3 SINE B2 1 212 -4 3 930 436 266 127 57 chr17 45267624 45267837 -50004814 - L1ME1 LINE L1 -24 6155 5928 3 930 216 0 0 0 chr17 45267837 45267861 -50004790 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 930 225 276 50 36 chr17 45267861 45267931 -50004720 - L1ME1 LINE L1 -2068 5927 5857 3 930 329 123 105 0 chr17 45268162 45268219 -50004432 - ERVL-B4-int LTR ERVL -1201 4513 4451 3 930 264 215 190 0 chr17 45268225 45268304 -50004347 + MTD LTR MaLR 268 361 -58 3 930 283 338 32 90 chr17 45268301 45268457 -50004194 + B4A SINE B4 17 163 -129 3 930 220 352 11 22 chr17 45268472 45268562 -50004089 + RSINE1 SINE B4 77 165 0 3 930 418 305 43 33 chr17 45268904 45269114 -50003537 - ERVL-E-int LTR ERVL -183 5484 5273 3 930 380 232 121 107 chr17 45269285 45269425 -50003226 + B3A SINE B2 2 143 -55 3 930 2111 124 168 6 chr17 45269432 45269789 -50002862 + MTC LTR MaLR 4 418 -3 3 930 288 0 0 0 chr17 45269830 45269862 -50002789 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 930 281 339 45 90 chr17 45270098 45270369 -50002282 - MLT1G3 LTR MaLR -287 308 5 3 930 775 266 43 47 chr17 45270406 45270659 -50001992 + MTD LTR MaLR 10 261 -158 3 930 301 148 19 0 chr17 45270663 45270717 -50001934 - ERVL-E-int LTR ERVL -977 4508 4454 3 930 510 198 68 15 chr17 45270723 45270864 -50001787 + MTD LTR MaLR 240 387 -32 3 930 275 283 46 23 chr17 45271054 45271184 -50001467 - L1ME1 LINE L1 -744 5429 5297 3 930 1379 91 16 16 chr17 45271340 45271530 -50001121 - B2_Mm2 SINE B2 -5 190 1 3 930 3498 28 2 0 chr17 45271580 45271975 -50000676 - MTA_Mm LTR MaLR 0 396 1 3 930 9741 21 0 0 chr17 45271975 45273073 -49999578 - MTA_Mm-int LTR MaLR 0 1098 1 3 930 3423 38 2 0 chr17 45273073 45273468 -49999183 - MTA_Mm LTR MaLR 0 396 1 3 930 842 328 15 11 chr17 45273702 45273970 -49998681 + B4A SINE B4 1 269 -23 3 930 208 158 26 0 chr17 45274380 45274418 -49998233 + CT-rich Low_complexity Low_complexity 1 39 0 3 930 627 287 140 51 chr17 45275425 45275736 -49996915 + MTE2a LTR MaLR 40 360 -19 3 930 290 254 191 28 chr17 45275735 45275913 -49996738 - MER44B DNA MER2_type -103 447 241 3 930 1219 54 0 0 chr17 45276007 45276155 -49996496 + B1_Mus1 SINE Alu 1 148 0 3 930 503 291 49 6 chr17 45276156 45276339 -49996312 - MER44B DNA MER2_type -298 252 62 3 930 603 67 0 0 chr17 45276616 45276705 -49995946 + (TTG)n Simple_repeat Simple_repeat 3 91 0 3 930 395 167 71 55 chr17 45277450 45277577 -49995074 + B3 SINE B2 2 130 -86 3 930 320 83 33 0 chr17 45277642 45277702 -49994949 + (CAGA)n Simple_repeat Simple_repeat 2 63 0 3 930 27 0 0 0 chr17 45277704 45277731 -49994920 + AT_rich Low_complexity Low_complexity 1 27 0 3 930 234 191 0 0 chr17 45277853 45277900 -49994751 + (TGG)n Simple_repeat Simple_repeat 3 49 0 3 930 981 147 6 0 chr17 45279401 45279557 -49993094 + URR1A DNA MER1_type 70 226 0 3 930 378 316 138 28 chr17 45280303 45280521 -49992130 - MLT1H LTR MaLR -206 343 102 3 930 242 301 68 50 chr17 45280751 45280912 -49991739 + Lx8 LINE L1 7056 7219 -254 3 930 491 263 44 50 chr17 45280943 45281103 -49991548 + ID_B1 SINE B4 62 220 -4 3 930 23 33 0 0 chr17 45282116 45282146 -49990505 + AT_rich Low_complexity Low_complexity 1 30 0 3 930 950 295 100 8 chr17 45282593 45282853 -49989798 + B4 SINE B4 1 284 -8 3 930 784 268 0 12 chr17 45283498 45283668 -49988983 - B4 SINE B4 0 292 125 3 930 1348 263 79 23 chr17 45284159 45284513 -49988138 + MTE2b LTR MaLR 1 374 -5 3 930 275 284 56 56 chr17 45284636 45284815 -49987836 + RLTR20D LTR ERVK 50 228 -340 3 930 5639 167 90 15 chr17 45285712 45286902 -49985749 + Lx9 LINE L1 6358 7636 -8 3 930 486 0 0 0 chr17 45287561 45287615 -49985036 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 930 606 181 40 9 chr17 45287616 45287737 -49984914 - RSINE1 SINE B4 -40 125 1 3 930 198 0 0 0 chr17 45287796 45287818 -49984833 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 3 930 864 89 7 8 chr17 45287818 45287950 -49984701 - B1_Mm SINE Alu -8 141 5 3 930 247 207 0 17 chr17 45288203 45288262 -49984389 - L1M5 LINE L1 -572 5601 5544 3 930 225 0 0 0 chr17 45288578 45288603 -49984048 + (A)n Simple_repeat Simple_repeat 1 25 0 3 930 329 342 38 104 chr17 45290813 45291100 -49981551 + B4A SINE B4 7 274 -18 3 930 189 0 0 0 chr17 45291108 45291129 -49981522 + (CA)n Simple_repeat Simple_repeat 1 21 0 3 930 366 203 31 0 chr17 45291241 45291305 -49981346 + L1M5 LINE L1 3088 3153 -2993 3 930 278 327 140 0 chr17 45291601 45291708 -49980943 + ID_B1 SINE B4 82 203 -21 3 930 185 65 0 31 chr17 45291730 45291743 -49980908 + (GA)n Simple_repeat Simple_repeat 2 14 0 4 930 360 0 0 0 chr17 45291743 45291783 -49980868 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 930 185 65 0 31 chr17 45291783 45291801 -49980850 + (GA)n Simple_repeat Simple_repeat 1 18 0 4 930 1863 160 98 0 chr17 45291885 45292039 -49980612 + ORR1D1 LTR MaLR 1 175 -199 4 930 630 39 0 0 chr17 45292039 45292116 -49980535 + (TC)n Simple_repeat Simple_repeat 1 77 0 4 930 507 33 0 0 chr17 45292116 45292177 -49980474 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 930 1863 160 98 0 chr17 45292177 45292358 -49980293 + ORR1D1 LTR MaLR 176 368 -6 4 930 993 124 22 16 chr17 45292447 45292650 -49980001 - ORR1C1 LTR MaLR -14 380 191 4 930 286 164 144 119 chr17 45292565 45292683 -49979968 - LTR16A1 LTR ERVL -101 355 235 4 930 679 335 93 16 chr17 45292695 45293228 -49979423 - MLT1F-int LTR MaLR -834 655 54 4 930 253 319 48 56 chr17 45294026 45294152 -49978499 - MLT1F LTR MaLR -95 453 329 4 930 411 299 126 63 chr17 45294211 45294418 -49978233 - L2 LINE L2 -596 2823 2604 4 930 427 339 33 87 chr17 45294534 45294792 -49977859 - B4A SINE B4 0 292 1 4 930 292 203 0 55 chr17 45294817 45294890 -49977761 - ID4 SINE ID -3 80 12 4 930 196 277 21 21 chr17 45294909 45294957 -49977694 - L2 LINE L2 -866 2553 2506 4 930 207 0 0 0 chr17 45295017 45295040 -49977611 + (T)n Simple_repeat Simple_repeat 1 23 0 4 930 384 59 0 0 chr17 45296294 45296345 -49976306 + (CGTG)n Simple_repeat Simple_repeat 1 51 0 4 930 643 293 74 43 chr17 45296374 45296631 -49976020 - B4A SINE B4 -27 265 1 4 930 719 310 56 9 chr17 45296631 45296851 -49975800 - B4 SINE B4 -61 231 1 4 930 243 0 0 0 chr17 45297110 45297137 -49975514 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 930 501 234 153 19 chr17 45297699 45297908 -49974743 + LTR50 LTR ERVL 4 240 -555 4 930 2626 109 22 75 chr17 45298049 45298503 -49974148 - RLTR23 LTR ERV1 0 430 1 4 930 22 35 0 0 chr17 45298585 45298614 -49974037 + AT_rich Low_complexity Low_complexity 1 29 0 4 930 475 289 35 0 chr17 45299101 45299215 -49973436 + B1F SINE Alu 13 130 -19 4 930 2368 97 19 0 chr17 45299267 45299588 -49973063 - ORR1A2 LTR MaLR 0 327 1 4 930 280 55 73 0 chr17 45299660 45299704 -49972947 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 4 930 1223 61 0 0 chr17 45299704 45299851 -49972800 - B1_Mus2 SINE Alu 0 147 1 4 930 280 55 73 0 chr17 45299851 45299861 -49972790 + (TTTG)n Simple_repeat Simple_repeat 3 12 0 4 930 2249 83 309 0 chr17 45301200 45301585 -49971066 - MT2B2 LTR ERVL -80 504 1 4 930 535 39 26 13 chr17 45301614 45301680 -49970971 + (GGGA)n Simple_repeat Simple_repeat 2 69 0 4 930 1138 101 6 11 chr17 45301680 45301861 -49970790 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 4 930 535 39 26 13 chr17 45301861 45301872 -49970779 + (GGGA)n Simple_repeat Simple_repeat 2 12 0 4 930 624 62 0 0 chr17 45301872 45301953 -49970698 + (GGAA)n Simple_repeat Simple_repeat 2 82 0 4 930 432 0 0 0 chr17 45302681 45302729 -49969922 + (TCCC)n Simple_repeat Simple_repeat 2 49 0 4 930 268 324 52 39 chr17 45302948 45303102 -49969549 + MamRep434 DNA TcMar 142 297 -129 4 930 521 157 9 0 chr17 45303167 45303282 -49969369 + (TG)n Simple_repeat Simple_repeat 1 116 0 4 930 6935 143 61 111 chr17 45303282 45304832 -49967819 + ORR1A3-int LTR MaLR 492 1963 0 4 930 1485 203 51 88 chr17 45304704 45304834 -49967817 - ORR1B2 LTR MaLR -8 359 258 4 930 2557 74 6 3 chr17 45304834 45305158 -49967493 + ORR1A2 LTR MaLR 3 327 0 4 930 1485 203 51 88 chr17 45305158 45305400 -49967251 - ORR1B2 LTR MaLR -110 257 1 4 930 211 200 0 0 chr17 45305490 45305530 -49967121 + C-rich Low_complexity Low_complexity 2 41 0 4 930 1161 191 40 0 chr17 45305591 45305790 -49966861 + B3 SINE B2 1 207 -9 4 930 206 128 0 25 chr17 45305874 45305914 -49966737 + GA-rich Low_complexity Low_complexity 4 42 0 4 930 540 0 0 0 chr17 45306410 45306470 -49966181 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 930 4507 14 0 0 chr17 45306869 45307362 -49965289 + MT2_Mm LTR ERVL 1 493 0 4 930 207 0 0 0 chr17 45308428 45308451 -49964200 + (TC)n Simple_repeat Simple_repeat 2 24 0 4 930 519 17 0 0 chr17 45308451 45308511 -49964140 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 930 308 235 34 90 chr17 45308547 45308636 -49964015 - RSINE1 SINE B4 0 165 82 4 930 257 304 116 0 chr17 45308931 45309000 -49963651 + B4A SINE B4 103 179 -113 4 930 687 287 139 29 chr17 45309132 45309493 -49963158 - MLT1H2 LTR MaLR -18 471 21 4 930 1485 255 54 91 chr17 45309699 45310239 -49962412 - RMER5 LTR ERV1 0 534 15 4 930 324 102 0 0 chr17 45310286 45310335 -49962316 + (TTCA)n Simple_repeat Simple_repeat 4 52 0 4 930 185 395 23 0 chr17 45310457 45310543 -49962108 + MIR SINE MIR 10 97 -165 4 930 21 0 0 0 chr17 45310584 45310605 -49962046 + GC_rich Low_complexity Low_complexity 1 21 0 4 930 6422 79 26 15 chr17 45310662 45311419 -49961232 + Lx LINE L1 5772 6518 -136 4 930 189 0 0 0 chr17 45311419 45311440 -49961211 + (TGGG)n Simple_repeat Simple_repeat 1 21 0 4 930 6422 79 26 15 chr17 45311440 45311555 -49961096 + Lx LINE L1 6519 6652 -2 4 930 207 0 0 0 chr17 45311613 45311636 -49961015 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 930 839 219 0 42 chr17 45311652 45311819 -49960832 + RSINE1 SINE B4 2 161 -4 4 930 24 32 0 0 chr17 45311827 45311858 -49960793 + AT_rich Low_complexity Low_complexity 1 31 0 4 930 964 50 0 0 chr17 45311858 45311977 -49960674 - B1_Mus1 SINE Alu 0 148 30 4 930 21 0 0 0 chr17 45312032 45312053 -49960598 + AT_rich Low_complexity Low_complexity 1 21 0 4 930 297 0 0 0 chr17 45312125 45312158 -49960493 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 930 1085 95 87 23 chr17 45312300 45312473 -49960178 - B2_Mm2 SINE B2 -10 185 2 4 930 256 266 76 115 chr17 45314046 45314203 -49958448 - ORR1D2 LTR MaLR 0 370 220 4 930 1152 221 51 58 chr17 45314221 45314533 -49958118 + ORR1E LTR MaLR 1 310 -49 4 930 249 122 0 24 chr17 45314633 45314675 -49957976 + ORR1E LTR MaLR 319 359 -11 4 930 276 372 26 0 chr17 45315107 45315220 -49957431 - Charlie4a DNA MER1_type -2 506 391 4 930 1883 118 73 13 chr17 45315223 45315524 -49957127 + ORR1A2 LTR MaLR 1 319 -8 4 930 8957 143 57 71 chr17 45315528 45317346 -49955305 + ORR1A2-int LTR MaLR 1 1792 0 4 930 2336 112 6 0 chr17 45317346 45317668 -49954983 + ORR1A2 LTR MaLR 1 324 -3 4 930 237 211 0 0 chr17 45317763 45317820 -49954831 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 930 674 236 24 23 chr17 45317958 45318137 -49954514 - B1_Mur2 SINE Alu 0 311 1 4 930 607 275 140 0 chr17 45318137 45318328 -49954323 - B4A SINE B4 -63 229 12 4 930 2435 95 6 9 chr17 45318861 45319191 -49953460 - ORR1A4 LTR MaLR 0 329 1 4 930 10366 127 29 97 chr17 45319191 45320927 -49951724 - ORR1A4-int LTR MaLR 0 1963 377 4 930 1499 87 0 5 chr17 45320927 45321123 -49951528 + B2_Mm2 SINE B2 1 195 0 4 930 10366 127 29 97 chr17 45321123 45321492 -49951159 - ORR1A4-int LTR MaLR -1587 376 1 4 930 2049 118 11 83 chr17 45321492 45321843 -49950808 - ORR1A4 LTR MaLR 0 326 1 4 930 1332 222 186 3 chr17 45321862 45322169 -49950482 - ORR1D2 LTR MaLR -4 366 4 4 930 510 17 0 0 chr17 45322191 45322250 -49950401 + (CATA)n Simple_repeat Simple_repeat 2 60 0 4 930 936 152 37 178 chr17 45322377 45322519 -49950132 - RMER19C LTR ERVK 0 611 469 4 930 1112 95 0 7 chr17 45322519 45322667 -49949984 + B1_Mus2 SINE Alu 1 147 0 4 930 936 152 37 178 chr17 45322667 45322765 -49949886 - RMER19C LTR ERVK -143 468 405 4 930 597 28 0 0 chr17 45322777 45322848 -49949803 + (GA)n Simple_repeat Simple_repeat 2 72 0 4 930 612 214 0 0 chr17 45322943 45323055 -49949596 - ORR1E LTR MaLR -241 118 7 4 930 306 217 0 16 chr17 45323127 45323188 -49949463 + ORR1E LTR MaLR 317 376 -3 4 930 631 158 44 0 chr17 45323656 45323814 -49948837 + CT-rich Low_complexity Low_complexity 4 168 0 4 930 202 298 0 0 chr17 45323814 45323861 -49948790 + polypyrimidine Low_complexity Low_complexity 2 48 0 4 930 596 213 29 12 chr17 45323861 45324042 -49948609 + ORR1D2 LTR MaLR 202 379 0 4 930 643 250 79 0 chr17 45324123 45324263 -49948388 + B3A SINE B2 1 151 -47 4 930 1154 89 71 6 chr17 45327816 45327985 -49944666 + B2_Mm2 SINE B2 1 180 -15 4 930 330 167 52 62 chr17 45327985 45328081 -49944570 + B2_Mm2 SINE B2 97 191 -4 4 930 201 39 0 0 chr17 45329069 45329095 -49943556 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 4 930 620 83 37 118 chr17 45329127 45329263 -49943388 + HAL1-2a_MD LINE L1 2394 2518 -506 4 930 369 0 0 0 chr17 45329263 45329304 -49943347 + (CATATA)n Simple_repeat Simple_repeat 4 44 0 4 930 455 236 31 8 chr17 45330839 45330967 -49941684 + MER121 Unknown Unknown 87 217 -195 4 930 791 278 57 9 chr17 45331138 45331349 -49941302 + ID_B1 SINE B4 1 221 -3 4 930 336 24 0 0 chr17 45332299 45332340 -49940311 + (TC)n Simple_repeat Simple_repeat 1 41 0 4 930 523 187 37 9 chr17 45332603 45332711 -49939940 - B3 SINE B2 -98 118 8 4 930 821 217 30 15 chr17 45332862 45333063 -49939588 - B3 SINE B2 -11 205 2 4 930 269 217 12 12 chr17 45333241 45333325 -49939326 + Lx9 LINE L1 7537 7620 -24 4 930 437 278 11 22 chr17 45333486 45333666 -49938985 + (TA)n Simple_repeat Simple_repeat 1 178 0 4 930 36156 24 1 7 chr17 45333678 45338836 -49933815 + L1Md_T LINE L1 469 5586 -297 4 930 8744 27 0 0 chr17 45338836 45339832 -49932819 + L1Md_T LINE L1 5587 6582 0 4 930 1163 42 14 21 chr17 45339923 45340068 -49932583 + B1_Mur4 SINE Alu 1 144 -6 4 930 263 295 83 8 chr17 45341027 45341190 -49931461 - L1MEd LINE L1 -5019 1100 953 4 930 238 284 131 76 chr17 45341794 45341939 -49930712 + LTR33B LTR ERVL 342 494 -9 4 930 186 242 95 16 chr17 45342145 45342208 -49930443 + MIRc SINE MIR 79 146 -122 4 930 1113 35 0 0 chr17 45342305 45342447 -49930204 + (TG)n Simple_repeat Simple_repeat 2 143 0 4 930 462 302 42 18 chr17 45342447 45342602 -49930049 - B4A SINE B4 -29 263 105 4 930 689 299 9 18 chr17 45342580 45342769 -49929882 - ID_B1 SINE B4 -26 266 81 4 930 370 196 21 0 chr17 45342776 45342873 -49929778 + CT-rich Low_complexity Low_complexity 2 100 0 4 930 619 269 32 6 chr17 45342894 45343051 -49929600 - ID_B1 SINE B4 -62 162 2 4 930 218 311 33 0 chr17 45343085 45343146 -49929505 + PB1D10 SINE Alu 46 108 -9 5 930 228 293 35 0 chr17 45343156 45343214 -49929437 + ID4_ SINE ID 2 61 -22 5 930 513 0 0 0 chr17 45343226 45343283 -49929368 + (TC)n Simple_repeat Simple_repeat 1 57 0 5 930 437 180 7 32 chr17 45343283 45343438 -49929213 + (CA)n Simple_repeat Simple_repeat 1 151 0 5 930 680 75 32 79 chr17 45343450 45343639 -49929012 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 930 3326 31 37 0 chr17 45343678 45344060 -49928591 - MTA_Mm LTR MaLR 0 396 1 5 930 898 311 31 37 chr17 45344118 45344469 -49928182 + MLT1A0 LTR MaLR 17 365 0 5 930 1399 256 73 6 chr17 45344549 45344879 -49927772 - MTD LTR MaLR -14 405 54 5 930 309 20 19 39 chr17 45345079 45345131 -49927520 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 930 659 298 80 38 chr17 45345180 45345417 -49927234 - B4 SINE B4 -43 249 3 5 930 5920 75 33 4 chr17 45346881 45346895 -49925756 - L1_Mus3 LINE L1 0 6638 6625 5 930 1289 40 0 0 chr17 45346895 45347043 -49925608 - B1_Mus1 SINE Alu 0 148 1 5 930 5920 75 33 4 chr17 45347043 45347821 -49924830 - L1_Mus3 LINE L1 -14 6624 5823 5 930 378 0 0 0 chr17 45347907 45347949 -49924702 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 930 1078 186 27 0 chr17 45347995 45348183 -49924468 + B3 SINE B2 10 202 -14 5 930 207 0 0 0 chr17 45348183 45348206 -49924445 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 5 930 304 263 10 87 chr17 45348348 45348452 -49924199 + RMER30 DNA MER1_type 63 158 -44 5 930 624 251 4 158 chr17 45348823 45349064 -49923587 + MTE2a LTR MaLR 24 227 -152 5 930 4090 141 40 15 chr17 45349318 45350001 -49922650 - RMER13B LTR ERVK -204 704 5 5 930 885 311 56 21 chr17 45350108 45350446 -49922205 + MLT1B LTR MaLR 41 390 0 5 930 1044 111 0 0 chr17 45350559 45350721 -49921930 + (GGGGA)n Simple_repeat Simple_repeat 2 163 0 5 931 194 181 4 51 chr17 45351638 45351689 -49920962 - MIRm SINE MIR -123 153 98 5 931 504 226 11 0 chr17 45351794 45351887 -49920764 + B1F1 SINE Alu 56 149 0 5 931 689 193 113 7 chr17 45351891 45352032 -49920619 + B3 SINE B2 1 156 -60 5 931 535 257 44 18 chr17 45353269 45353411 -49919240 - B3A SINE B2 -8 187 47 5 931 301 281 125 0 chr17 45354840 45354936 -49917715 + PB1D10 SINE Alu 5 112 -5 5 931 210 208 83 0 chr17 45354955 45355003 -49917648 + B1F1 SINE Alu 1 52 -97 5 931 246 309 18 18 chr17 45355914 45356026 -49916625 + (CATA)n Simple_repeat Simple_repeat 4 115 0 5 931 2301 183 80 39 chr17 45357120 45357610 -49915041 + RMER20A LTR ERVK 1 510 -6 5 931 783 251 5 32 chr17 45357983 45358168 -49914483 - B3A SINE B2 -16 182 3 5 931 243 215 76 15 chr17 45358282 45358348 -49914303 + B4 SINE B4 3 72 -220 5 931 336 24 0 0 chr17 45358348 45358389 -49914262 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 931 628 234 60 54 chr17 45360548 45360703 -49911948 + B3A SINE B2 1 154 -62 5 931 1221 75 0 0 chr17 45360703 45360929 -49911722 + (CA)n Simple_repeat Simple_repeat 1 226 0 5 931 574 274 57 92 chr17 45360929 45360979 -49911672 + B3 SINE B2 144 194 -1 5 931 1160 200 130 68 chr17 45361233 45361642 -49911009 + MTD LTR MaLR 1 406 -15 5 931 1178 61 0 20 chr17 45361685 45361697 -49910954 - B1_Mus1 SINE Alu 0 148 139 5 931 243 0 0 0 chr17 45361697 45361724 -49910927 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 931 1178 61 0 20 chr17 45361724 45361861 -49910790 - B1_Mus1 SINE Alu -10 138 2 5 931 562 223 1 8 chr17 45362631 45362753 -49909898 + B4A SINE B4 113 230 -62 5 931 1382 92 0 5 chr17 45362753 45362938 -49909713 + B2_Mm2 SINE B2 1 184 -11 5 931 450 294 38 25 chr17 45362948 45363105 -49909546 + RSINE1 SINE B4 3 161 -4 5 931 201 372 0 11 chr17 45363159 45363246 -49909405 + (CATG)n Simple_repeat Simple_repeat 3 88 0 5 931 345 125 0 0 chr17 45364150 45364206 -49908445 + (GAAA)n Simple_repeat Simple_repeat 3 58 0 5 931 1177 87 0 25 chr17 45365064 45365392 -49907259 + (CA)n Simple_repeat Simple_repeat 1 319 0 5 931 477 50 0 0 chr17 45365465 45365525 -49907126 + (GA)n Simple_repeat Simple_repeat 1 60 0 5 931 201 39 0 0 chr17 45365526 45365552 -49907099 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 931 196 322 115 60 chr17 45367104 45367286 -49905365 + MIRc SINE MIR 1 192 -76 5 931 255 273 47 66 chr17 45368031 45368067 -49904584 - ID_B1 SINE B4 -116 108 7 5 931 303 203 0 59 chr17 45368067 45368135 -49904516 - tRNA-Ala-GCY_ tRNA tRNA -11 64 1 5 931 292 266 10 87 chr17 45368147 45368250 -49904401 - PB1D10 SINE Alu -5 112 18 5 931 395 202 10 0 chr17 45368300 45368399 -49904252 + CT-rich Low_complexity Low_complexity 2 101 0 5 931 544 134 46 17 chr17 45368441 45368615 -49904036 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 931 271 167 14 43 chr17 45368622 45368691 -49903960 + (TATATG)n Simple_repeat Simple_repeat 1 67 0 5 931 557 185 23 17 chr17 45368691 45368867 -49903784 + (TG)n Simple_repeat Simple_repeat 1 177 0 5 931 460 288 42 36 chr17 45368872 45369038 -49903613 - B3 SINE B2 -13 203 37 5 931 402 297 18 9 chr17 45369521 45369633 -49903018 + RSINE1 SINE B4 3 115 -50 5 931 1200 79 0 24 chr17 45371192 45371349 -49901302 + B2_Mm2 SINE B2 1 154 -41 5 931 1059 52 0 0 chr17 45371349 45371483 -49901168 + (TAGA)n Simple_repeat Simple_repeat 4 137 0 5 931 1200 79 0 24 chr17 45371483 45371494 -49901157 + B2_Mm2 SINE B2 155 165 -30 5 931 508 314 22 7 chr17 45371706 45371844 -49900807 + RSINE1 SINE B4 12 151 -14 5 931 180 77 0 0 chr17 45371845 45371871 -49900780 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 931 1069 231 15 0 chr17 45371971 45372170 -49900481 - B3 SINE B2 -14 202 1 5 931 188 238 0 0 chr17 45372437 45372479 -49900172 + MIRc SINE MIR 81 122 -146 5 931 1429 132 9 5 chr17 45372545 45372765 -49899886 + URR1A DNA MER1_type 5 225 -1 5 931 392 255 74 10 chr17 45373126 45373281 -49899370 + RMER15 LTR ERVL 301 492 -83 5 931 837 217 90 26 chr17 45373312 45373501 -49899150 - ID_B1 SINE B4 -3 221 21 5 931 1026 187 71 0 chr17 45374260 45374458 -49898193 + B3 SINE B2 2 213 -3 5 931 745 319 33 57 chr17 45375813 45376149 -49896502 - MARNA DNA Mariner -169 417 90 5 931 539 300 106 40 chr17 45377500 45377774 -49894877 - B4A SINE B4 0 292 1 5 931 403 0 131 0 chr17 45377892 45377999 -49894652 + (TCCC)n Simple_repeat Simple_repeat 1 121 0 5 931 890 242 72 5 chr17 45378653 45378861 -49893790 - ID_B1 SINE B4 -1 223 2 5 931 261 0 0 0 chr17 45380056 45380085 -49892566 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 931 24 32 0 0 chr17 45380585 45380616 -49892035 + AT_rich Low_complexity Low_complexity 1 31 0 5 931 541 262 58 99 chr17 45380729 45380920 -49891731 - B3A SINE B2 -15 183 1 5 931 324 0 0 0 chr17 45381111 45381147 -49891504 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 931 326 224 39 26 chr17 45381302 45381380 -49891271 - ID2 SINE ID -2 81 3 5 931 266 312 113 40 chr17 45381652 45381802 -49890849 + L2 LINE L2 2707 2867 -552 5 931 854 297 57 0 chr17 45383190 45383402 -49889249 + ID_B1 SINE B4 1 224 0 5 931 249 308 67 55 chr17 45383629 45383812 -49888839 + B4 SINE B4 2 187 -105 5 931 312 27 0 0 chr17 45383869 45383906 -49888745 + (TC)n Simple_repeat Simple_repeat 1 37 0 5 931 242 309 50 19 chr17 45384359 45384493 -49888158 - L2c LINE L2 -63 3324 3161 5 931 326 172 15 15 chr17 45384966 45385031 -49887620 + MIR3 SINE MIR 90 154 -54 5 931 225 288 17 67 chr17 45385045 45385164 -49887487 - MER117 DNA MER1_type -8 189 77 5 931 324 352 147 16 chr17 45385246 45385497 -49887154 + B4A SINE B4 5 288 -4 5 931 236 100 0 24 chr17 45385525 45385566 -49887085 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 931 622 254 45 0 chr17 45385604 45385738 -49886913 + RSINE1 SINE B4 2 141 -24 5 931 180 0 0 0 chr17 45385738 45385758 -49886893 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 931 207 0 0 0 chr17 45385758 45385780 -49886871 + (GA)n Simple_repeat Simple_repeat 2 24 0 5 931 405 244 33 0 chr17 45385789 45385879 -49886772 + PB1D10 SINE Alu 17 109 -8 5 931 1230 110 0 4 chr17 45385903 45386157 -49886494 + (GGA)n Simple_repeat Simple_repeat 1 253 0 5 931 333 125 0 0 chr17 45386157 45386213 -49886438 + (CAG)n Simple_repeat Simple_repeat 2 57 0 5 931 292 244 89 0 chr17 45386456 45386552 -49886099 + MTD LTR MaLR 2 137 -282 5 931 27 0 0 0 chr17 45387417 45387444 -49885207 + AT_rich Low_complexity Low_complexity 1 27 0 5 931 483 18 0 0 chr17 45388669 45388725 -49883926 + (TCTG)n Simple_repeat Simple_repeat 2 57 0 5 931 348 304 1 108 chr17 45388921 45389061 -49883590 + MIRb SINE MIR 67 188 -20 5 931 201 108 0 0 chr17 45389533 45389570 -49883081 + (A)n Simple_repeat Simple_repeat 1 37 0 5 931 189 0 0 0 chr17 45390215 45390236 -49882415 + (CCCCCA)n Simple_repeat Simple_repeat 4 24 0 5 931 1098 269 138 12 chr17 45390798 45391118 -49881533 + MTEa LTR MaLR 13 372 -7 5 931 706 267 26 62 chr17 45391837 45392029 -49880622 - B3A SINE B2 0 198 14 5 931 359 266 11 11 chr17 45392034 45392129 -49880522 + MER5A1 DNA MER1_type 68 162 -4 5 931 213 39 0 0 chr17 45392284 45392310 -49880341 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 5 931 885 259 96 98 chr17 45392657 45393034 -49879617 + MTE2a LTR MaLR 1 376 -3 5 931 715 251 56 42 chr17 45393189 45393405 -49879246 - MER20 DNA MER1_type 0 219 1 5 931 214 316 65 18 chr17 45393564 45393699 -49878952 + MIR SINE MIR 54 193 -75 5 931 621 247 144 96 chr17 45393712 45394049 -49878602 - ORR1E LTR MaLR -1 378 8 6 931 373 301 78 63 chr17 45394216 45394500 -49878151 + B4A SINE B4 1 288 -4 6 931 945 272 106 36 chr17 45394649 45394939 -49877712 - L1MD3 LINE L1 0 7995 7710 6 931 288 53 0 0 chr17 45394939 45394977 -49877674 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 931 945 272 106 36 chr17 45394977 45395179 -49877472 - L1MD3 LINE L1 -286 7709 7471 6 931 310 283 171 76 chr17 45395766 45396030 -49876621 - ORR1E LTR MaLR -39 320 32 6 931 856 219 197 28 chr17 45396030 45396279 -49876372 + B4 SINE B4 2 292 0 6 931 375 23 0 0 chr17 45396280 45396324 -49876327 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 931 356 171 28 21 chr17 45396324 45396467 -49876184 + (CA)n Simple_repeat Simple_repeat 2 145 0 6 931 381 41 0 20 chr17 45396481 45396492 -49876159 + HAL1-3A_ME LINE L1 1975 1985 -873 6 931 411 21 0 0 chr17 45396492 45396540 -49876111 + (TC)n Simple_repeat Simple_repeat 1 48 0 6 931 381 41 0 20 chr17 45396540 45396578 -49876073 + HAL1-3A_ME LINE L1 1986 2023 -835 6 931 318 218 19 19 chr17 45396589 45396748 -49875903 + (CA)n Simple_repeat Simple_repeat 1 159 0 6 931 611 296 84 59 chr17 45396751 45397066 -49875585 - MLT2B4 LTR ERVL -262 455 118 6 931 228 159 0 22 chr17 45399047 45399092 -49873559 + (TTGG)n Simple_repeat Simple_repeat 4 47 0 6 931 790 318 4 35 chr17 45399092 45399323 -49873328 - ID_B1 SINE B4 0 224 1 6 931 363 333 119 22 chr17 45399331 45399558 -49873093 + L1MEd LINE L1 916 1164 -4955 6 931 423 149 0 0 chr17 45399623 45399697 -49872954 + (CA)n Simple_repeat Simple_repeat 1 74 0 6 931 502 233 34 25 chr17 45399853 45399972 -49872679 - ID_B1 SINE B4 0 224 105 6 931 551 264 12 86 chr17 45400918 45401080 -49871571 + B3A SINE B2 49 198 0 6 931 438 99 33 0 chr17 45401318 45401409 -49871242 + (TG)n Simple_repeat Simple_repeat 2 95 0 6 931 197 306 0 0 chr17 45402403 45402452 -49870199 + L2b LINE L2 3317 3365 -10 6 931 227 277 216 48 chr17 45402986 45403153 -49869498 + MLT1A LTR MaLR 44 238 -136 6 931 290 250 67 22 chr17 45403277 45403367 -49869284 - ORR1D2 LTR MaLR 0 370 277 6 931 255 302 57 23 chr17 45404658 45404746 -49867905 - MTEa LTR MaLR -9 370 280 6 931 240 59 0 0 chr17 45405616 45405650 -49867001 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 6 931 345 322 148 28 chr17 45405899 45406075 -49866576 + MER58B DNA MER1_type 144 340 -1 6 931 294 29 0 0 chr17 45406105 45406140 -49866511 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 6 931 522 227 102 0 chr17 45406522 45406650 -49866001 - RMER1B Other Other -710 356 216 6 931 2547 216 28 61 chr17 45406648 45407319 -49865332 + RMER1C Other Other 663 1311 -31 6 931 2465 214 22 64 chr17 45407319 45407957 -49864694 - RMER19C LTR ERVK 0 611 1 6 931 476 260 23 39 chr17 45407977 45408105 -49864546 + MER82 DNA MER2_type 65 190 -463 6 931 2851 308 70 25 chr17 45408201 45408855 -49863796 + Lx8 LINE L1 6128 6817 -656 6 931 1999 131 15 59 chr17 45408855 45408913 -49863738 - ORR1A3 LTR MaLR 0 326 286 6 931 1186 75 0 0 chr17 45408913 45409059 -49863592 - B1_Mm SINE Alu 0 147 2 6 931 1999 131 15 59 chr17 45409059 45409341 -49863310 - ORR1A3 LTR MaLR -41 285 1 6 931 2851 308 70 25 chr17 45409341 45409862 -49862789 + Lx8 LINE L1 6818 7356 -117 6 931 1125 320 40 6 chr17 45409985 45410334 -49862317 + MER82 DNA MER2_type 284 644 -9 6 931 320 148 0 16 chr17 45410731 45410793 -49861858 + (TTCA)n Simple_repeat Simple_repeat 4 64 0 6 931 249 287 23 51 chr17 45410814 45410990 -49861661 + (TTCA)n Simple_repeat Simple_repeat 1 171 0 6 931 346 257 5 58 chr17 45411012 45411202 -49861449 + (TTCA)n Simple_repeat Simple_repeat 1 180 0 6 931 302 0 0 26 chr17 45413541 45413580 -49859071 + (CTAA)n Simple_repeat Simple_repeat 1 38 0 6 931 243 88 0 0 chr17 45415659 45415693 -49856958 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 931 459 0 0 0 chr17 45415693 45415743 -49856908 + (GA)n Simple_repeat Simple_repeat 2 52 0 6 931 268 157 20 0 chr17 45415854 45415905 -49856746 + ID4 SINE ID 2 53 -30 6 931 190 241 34 17 chr17 45415971 45416030 -49856621 - L2 LINE L2 -1128 2291 2232 6 931 248 247 52 0 chr17 45416409 45416486 -49856165 + GA-rich Low_complexity Low_complexity 1 81 0 6 931 887 124 0 7 chr17 45417345 45417491 -49855160 + (TTTC)n Simple_repeat Simple_repeat 1 145 0 6 931 399 325 162 16 chr17 45417752 45418005 -49854646 + B4A SINE B4 1 290 -2 6 931 25 51 0 0 chr17 45418082 45418121 -49854530 + AT_rich Low_complexity Low_complexity 1 39 0 6 931 246 333 23 0 chr17 45418135 45418222 -49854429 + Tigger15a DNA TcMar 183 271 -444 6 931 261 255 123 13 chr17 45418403 45418558 -49854093 - RMER17A2 LTR ERVK -491 415 244 6 931 272 275 10 108 chr17 45418995 45419097 -49853554 - MIR SINE MIR -84 124 33 6 931 273 125 0 0 chr17 45419402 45419458 -49853193 + (A)n Simple_repeat Simple_repeat 1 56 0 6 931 522 31 0 0 chr17 45419828 45419892 -49852759 + (TC)n Simple_repeat Simple_repeat 1 64 0 6 931 239 315 14 0 chr17 45420386 45420459 -49852192 + Charlie24 DNA MER1_type 2346 2419 -31 6 931 260 301 133 13 chr17 45420618 45420743 -49851908 - MIRb SINE MIR -89 173 43 6 931 1139 53 7 0 chr17 45420888 45421039 -49851612 + (TGGA)n Simple_repeat Simple_repeat 3 154 0 6 931 354 302 0 72 chr17 45421205 45421330 -49851321 + MLT1C LTR MaLR 3 118 -349 6 931 369 0 0 0 chr17 45421374 45421415 -49851236 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 931 323 294 74 25 chr17 45421442 45421564 -49851087 + MLT1C LTR MaLR 255 382 -8 6 931 1880 213 142 113 chr17 45421721 45422313 -49850338 + RMER19C LTR ERVK 1 609 -2 6 931 857 240 0 0 chr17 45424449 45424595 -49848056 - RSINE1 SINE B4 -17 148 3 6 931 21 0 0 0 chr17 45425068 45425089 -49847562 + AT_rich Low_complexity Low_complexity 1 21 0 6 931 194 0 39 0 chr17 45425094 45425120 -49847531 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 6 931 816 198 215 0 chr17 45425308 45425485 -49847166 - B3 SINE B2 0 216 2 6 931 22 0 0 0 chr17 45425644 45425666 -49846985 + AT_rich Low_complexity Low_complexity 1 22 0 6 931 240 111 0 0 chr17 45425771 45425807 -49846844 + (GGA)n Simple_repeat Simple_repeat 3 38 0 6 931 191 366 84 36 chr17 45425856 45426023 -49846628 - MIR SINE MIR -54 208 34 6 931 285 29 0 0 chr17 45426753 45426787 -49845864 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 931 507 216 0 49 chr17 45428057 45428179 -49844472 + PB1D10 SINE Alu 1 116 -1 6 931 239 297 0 0 chr17 45428205 45428269 -49844382 - MER94 DNA AcHobo -68 66 3 6 931 195 69 0 0 chr17 45428653 45428682 -49843969 + (A)n Simple_repeat Simple_repeat 1 29 0 6 931 227 291 118 19 chr17 45429005 45429166 -49843485 - L2a LINE L2 -129 3297 3121 6 931 209 292 0 0 chr17 45430326 45430374 -49842277 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 931 520 198 6 36 chr17 45430374 45430542 -49842109 + (TATG)n Simple_repeat Simple_repeat 4 166 0 6 931 366 23 0 0 chr17 45431612 45431655 -49840996 + (TC)n Simple_repeat Simple_repeat 2 44 0 6 931 396 0 0 0 chr17 45431859 45431903 -49840748 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 931 579 235 0 0 chr17 45432137 45432256 -49840395 + ID_B1 SINE B4 106 224 0 6 931 304 329 75 27 chr17 45432650 45432797 -49839854 + HAL1-3A_ME LINE L1 2284 2437 -421 6 931 246 155 13 53 chr17 45432798 45432873 -49839778 + GA-rich Low_complexity Low_complexity 1 72 0 6 931 825 243 116 62 chr17 45432891 45433167 -49839484 + B4A SINE B4 2 292 0 6 931 765 85 0 0 chr17 45433194 45433300 -49839351 + (GA)n Simple_repeat Simple_repeat 1 106 0 6 931 531 282 87 22 chr17 45433436 45433621 -49839030 - B3A SINE B2 0 198 2 6 931 410 277 36 7 chr17 45434112 45434250 -49838401 - RMER15 LTR ERVL -51 524 383 6 931 472 186 72 56 chr17 45435199 45435324 -49837327 + B4A SINE B4 1 127 -165 6 931 340 213 24 53 chr17 45435906 45436050 -49836601 + MLT1A LTR MaLR 284 444 -23 6 931 212 121 30 0 chr17 45436051 45436084 -49836567 + MIRb SINE MIR 226 259 -9 6 931 328 238 8 0 chr17 45436354 45436438 -49836213 - PB1D10 SINE Alu -22 127 41 6 931 206 315 42 85 chr17 45437125 45437243 -49835408 - MIRb SINE MIR -124 144 32 6 931 1133 259 52 74 chr17 45437532 45437899 -49834752 - MTEb LTR MaLR 0 379 21 6 931 413 110 0 14 chr17 45438796 45438870 -49833781 + (TG)n Simple_repeat Simple_repeat 2 74 0 6 931 579 324 117 0 chr17 45438873 45439095 -49833556 - B4A SINE B4 -10 282 35 6 931 557 291 77 23 chr17 45439325 45439585 -49833066 + B4A SINE B4 1 274 -18 6 931 234 390 0 0 chr17 45439599 45439699 -49832952 + (CA)n Simple_repeat Simple_repeat 1 100 0 6 931 2263 174 23 13 chr17 45440484 45440880 -49831771 - MTC LTR MaLR -21 400 1 6 931 303 49 0 0 chr17 45441277 45441318 -49831333 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 6 931 1945 183 236 48 chr17 45441528 45442008 -49830643 + MT2B LTR ERVL 2 578 -23 6 931 333 0 0 0 chr17 45442008 45442045 -49830606 + (CAGA)n Simple_repeat Simple_repeat 4 40 0 6 931 1945 183 236 48 chr17 45442045 45442068 -49830583 + MT2B LTR ERVL 579 600 -1 6 931 948 161 0 13 chr17 45442074 45442225 -49830426 - B1_Mur4 SINE Alu 0 150 2 6 931 980 244 37 9 chr17 45442757 45442972 -49829679 - ID_B1 SINE B4 -2 222 2 6 931 235 343 153 32 chr17 45442984 45443170 -49829481 - MIRc SINE MIR 0 208 5 6 931 477 0 0 0 chr17 45443969 45444022 -49828629 + (TG)n Simple_repeat Simple_repeat 1 53 0 6 931 1243 253 92 13 chr17 45444138 45444586 -49828065 - L1MB7 LINE L1 -2 6182 5700 6 931 288 0 0 0 chr17 45444614 45444646 -49828005 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 931 360 0 0 0 chr17 45444646 45444685 -49827966 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 931 665 279 13 6 chr17 45444687 45444846 -49827805 - B3A SINE B2 -38 160 1 6 931 1625 132 32 4 chr17 45445599 45445851 -49826800 - ORR1A2 LTR MaLR -1 326 68 6 931 235 302 30 40 chr17 45446104 45446204 -49826447 - MLT1J1 LTR MaLR -312 132 34 7 931 418 244 1 108 chr17 45446355 45446496 -49826155 - B3A SINE B2 -9 207 84 7 931 319 330 22 0 chr17 45447107 45447195 -49825456 + B4A SINE B4 3 92 -200 7 931 1524 224 63 56 chr17 45447195 45447594 -49825057 - MTD LTR MaLR 0 419 17 7 931 225 0 0 0 chr17 45447594 45447619 -49825032 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 7 931 1524 224 63 56 chr17 45447619 45447631 -49825020 - MTD LTR MaLR -403 16 5 7 931 413 131 30 30 chr17 45448477 45448611 -49824040 + (TCTCTG)n Simple_repeat Simple_repeat 4 137 0 7 931 320 0 25 0 chr17 45448611 45448651 -49824000 + (CA)n Simple_repeat Simple_repeat 1 41 0 7 931 288 341 0 0 chr17 45448659 45448741 -49823910 - B4 SINE B4 -209 83 2 7 931 788 183 0 11 chr17 45448986 45449168 -49823483 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 931 329 284 205 0 chr17 45449667 45449794 -49822857 - HAL1-3A_ME LINE L1 -421 2437 2285 7 931 192 77 0 0 chr17 45449794 45449820 -49822831 + (TCC)n Simple_repeat Simple_repeat 1 26 0 7 931 1166 252 90 24 chr17 45451006 45451339 -49821312 + ORR1E LTR MaLR 1 355 -4 7 931 1109 171 41 15 chr17 45451932 45452128 -49820523 + B3 SINE B2 16 216 0 7 931 193 304 99 11 chr17 45452840 45452970 -49819681 - MIRb SINE MIR -62 146 2 7 931 522 93 0 0 chr17 45453725 45453811 -49818840 + (TTTC)n Simple_repeat Simple_repeat 4 89 0 7 931 1002 121 14 0 chr17 45453816 45453957 -49818694 - B1_Mus1 SINE Alu -5 143 1 7 931 414 0 0 0 chr17 45454292 45454338 -49818313 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 931 238 247 91 0 chr17 45454493 45454570 -49818081 + MIRm SINE MIR 55 138 -138 7 931 464 350 0 53 chr17 45454645 45454691 -49817960 - RSINE1 SINE B4 -21 144 99 7 931 405 0 0 0 chr17 45454691 45454736 -49817915 + (TC)n Simple_repeat Simple_repeat 1 45 0 7 931 464 350 0 53 chr17 45454736 45454840 -49817811 - RSINE1 SINE B4 -67 98 2 7 931 329 215 145 24 chr17 45455907 45456031 -49816620 + L1ME4a LINE L1 5979 6117 -7 7 931 180 0 0 0 chr17 45456031 45456051 -49816600 + (CA)n Simple_repeat Simple_repeat 2 21 0 7 931 240 35 0 0 chr17 45457436 45457465 -49815186 + (A)n Simple_repeat Simple_repeat 1 29 0 7 931 632 306 38 16 chr17 45459138 45459324 -49813327 - RMER30 DNA MER1_type -2 200 11 7 931 214 200 0 0 chr17 45459535 45459575 -49813076 + T-rich Low_complexity Low_complexity 1 40 0 7 931 1161 42 0 0 chr17 45459619 45459761 -49812890 + B1_Mus2 SINE Alu 6 147 0 7 931 221 333 117 10 chr17 45460127 45460230 -49812421 + MIR3 SINE MIR 85 198 -10 7 931 351 194 0 69 chr17 45461094 45461166 -49811485 + B4 SINE B4 2 68 -224 7 931 474 18 0 0 chr17 45461169 45461224 -49811427 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 931 445 189 156 0 chr17 45461257 45461347 -49811304 + B4 SINE B4 125 228 -64 7 931 378 252 107 54 chr17 45461348 45461516 -49811135 + Lx8 LINE L1 7290 7466 -7 7 931 222 226 134 41 chr17 45461986 45462083 -49810568 + MER5A DNA MER1_type 7 112 -77 7 931 279 296 140 7 chr17 45462376 45462512 -49810139 + MIRb SINE MIR 96 249 -19 7 931 279 0 0 0 chr17 45462715 45462746 -49809905 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 931 266 293 23 47 chr17 45462746 45462832 -49809819 - PB1D10 SINE Alu -11 106 23 7 931 571 328 60 57 chr17 45462891 45463172 -49809479 - B4A SINE B4 0 292 11 7 931 290 341 65 22 chr17 45463311 45463449 -49809202 - Charlie8 DNA MER1_type -2189 239 96 7 931 275 266 16 0 chr17 45463538 45463602 -49809049 - MIR SINE MIR -87 175 111 7 931 248 376 21 21 chr17 45464380 45464524 -49808127 - MIR3 SINE MIR -21 187 44 7 931 198 103 0 0 chr17 45465505 45465534 -49807117 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 931 242 346 38 19 chr17 45466273 45466379 -49806272 - L3b LINE CR1 -248 234 127 7 931 216 111 0 0 chr17 45467724 45467760 -49804891 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 931 340 252 128 51 chr17 45467777 45467894 -49804757 - B4A SINE B4 0 292 167 7 931 749 123 32 32 chr17 45468101 45468227 -49804424 - ORR1B2 LTR MaLR -232 135 10 7 931 198 0 0 0 chr17 45468227 45468249 -49804402 + (CA)n Simple_repeat Simple_repeat 2 23 0 7 931 415 264 116 0 chr17 45468394 45468523 -49804128 - MER5A1 DNA MER1_type -20 146 3 7 931 249 280 261 36 chr17 45468647 45468758 -49803893 - RSINE1 SINE B4 -25 140 5 7 931 1007 168 105 29 chr17 45470267 45470476 -49802175 + URR1A DNA MER1_type 1 225 -1 7 931 441 0 0 0 chr17 45471401 45471450 -49801201 + (TC)n Simple_repeat Simple_repeat 2 50 0 7 931 576 62 0 0 chr17 45471450 45471530 -49801121 + (TG)n Simple_repeat Simple_repeat 2 82 0 7 931 495 214 123 93 chr17 45471537 45471677 -49800974 - B3A SINE B2 -41 157 1 7 931 216 135 0 0 chr17 45471772 45471809 -49800842 + (A)n Simple_repeat Simple_repeat 1 37 0 7 931 364 322 28 7 chr17 45472025 45472169 -49800482 + ORR1E LTR MaLR 1 147 -212 7 931 1072 271 114 37 chr17 45473819 45474171 -49798480 - MTE2b LTR MaLR 0 379 1 7 931 380 259 36 27 chr17 45474188 45474299 -49798352 - RMER15 LTR ERVL -42 533 422 7 931 248 393 59 55 chr17 45475427 45475734 -49796917 + ORR1E LTR MaLR 52 359 0 7 931 325 380 72 62 chr17 45475734 45476120 -49796531 + LTR16A LTR ERVL 31 420 -31 7 931 205 247 158 12 chr17 45476715 45476797 -49795854 + MIRb SINE MIR 37 130 -138 7 931 313 347 67 39 chr17 45478060 45478240 -49794411 + LTR16A LTR ERVL 2 186 -265 7 931 1182 75 0 0 chr17 45480378 45480525 -49792126 + B1_Mm SINE Alu 1 147 0 7 931 2510 202 27 107 chr17 45480735 45481399 -49791252 - RMER19C LTR ERVK 0 611 1 7 931 290 299 54 27 chr17 45481424 45481572 -49791079 - LTR16C LTR ERVL -21 468 317 7 931 328 307 0 0 chr17 45481588 45481676 -49790975 - Lx8 LINE L1 -884 6589 6502 7 931 965 234 1 23 chr17 45481676 45481867 -49790784 + B3 SINE B2 30 211 -5 7 116 896 260 59 7 chr17 45481868 45482211 -49790440 + Lx7 LINE L1 5356 5719 -1977 7 932 668 315 34 6 chr17 45482226 45482546 -49790105 - L1M2 LINE L1 -747 5396 5039 7 932 223 200 22 0 chr17 45482610 45482655 -49789996 - MIR3 SINE MIR -54 154 109 7 932 252 0 0 0 chr17 45482861 45482889 -49789762 + (CA)n Simple_repeat Simple_repeat 1 28 0 7 932 403 253 103 0 chr17 45482931 45483018 -49789633 - PB1D10 SINE Alu -21 96 1 7 932 205 372 112 26 chr17 45483018 45483170 -49789481 + L2 LINE L2 403 567 -2852 7 932 777 274 140 99 chr17 45483175 45483588 -49789063 + LTR40b LTR ERVL 33 462 0 7 932 966 275 52 59 chr17 45483670 45483960 -49788691 + B4A SINE B4 5 292 0 7 932 237 335 101 20 chr17 45484325 45484523 -49788128 - L1MEg LINE L1 -5315 769 556 7 932 784 170 240 6 chr17 45485241 45485424 -49787227 + URR1A DNA MER1_type 1 226 0 7 932 984 233 44 0 chr17 45485481 45485687 -49786964 + ID_B1 SINE B4 2 216 -8 7 932 249 311 64 28 chr17 45485795 45485904 -49786747 + L2c LINE L2 3241 3353 -34 7 932 217 276 44 44 chr17 45486954 45487045 -49785606 - MER5A DNA MER1_type -55 134 44 7 932 795 189 0 4 chr17 45487152 45487675 -49784976 + (CA)n Simple_repeat Simple_repeat 1 521 0 7 932 468 219 0 0 chr17 45487697 45487861 -49784790 + (CA)n Simple_repeat Simple_repeat 1 164 0 7 932 468 263 17 34 chr17 45488554 45488672 -49783979 + PB1D10 SINE Alu 2 117 0 7 932 829 298 24 47 chr17 45488794 45489048 -49783603 - B4A SINE B4 -2 290 43 7 932 1388 238 31 77 chr17 45489581 45489972 -49782679 - MTEa LTR MaLR -6 373 1 7 932 268 360 49 24 chr17 45490003 45490208 -49782443 - L2a LINE L2 -258 3168 2959 7 932 463 292 9 0 chr17 45490325 45490431 -49782220 + PB1D10 SINE Alu 1 107 -10 7 932 182 279 0 25 chr17 45491150 45491231 -49781420 + (CATATA)n Simple_repeat Simple_repeat 3 81 0 7 932 252 289 98 72 chr17 45491235 45491470 -49781181 - RLTR21 LTR ERVK -266 1306 1066 7 932 246 149 0 113 chr17 45491721 45491774 -49780877 + ZP3AR Satellite Satellite 36 82 -130 7 932 668 146 0 0 chr17 45491734 45491837 -49780814 + BC1_Mm scRNA scRNA 1 103 -49 7 932 387 0 0 0 chr17 45492147 45492190 -49780461 + (TC)n Simple_repeat Simple_repeat 1 43 0 7 932 498 160 0 0 chr17 45492911 45493042 -49779609 + (TCTG)n Simple_repeat Simple_repeat 4 134 0 7 932 288 268 167 18 chr17 45493176 45493290 -49779361 - MIR3 SINE MIR -27 181 51 7 932 823 254 17 11 chr17 45494266 45494441 -49778210 + MTEa LTR MaLR 1 176 -203 7 932 228 288 151 82 chr17 45494945 45495104 -49777547 + MER5A DNA MER1_type 1 170 -19 7 932 1452 220 93 26 chr17 45495682 45496027 -49776624 - MTEb LTR MaLR -7 372 5 7 932 1057 200 35 15 chr17 45496026 45496223 -49776428 - B3 SINE B2 -6 210 9 7 932 360 0 0 0 chr17 45496223 45496263 -49776388 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 932 355 227 180 8 chr17 45497507 45497610 -49775041 + PB1 SINE Alu 5 121 -6 7 932 828 186 185 6 chr17 45497631 45497809 -49774842 + ID_B1 SINE B4 6 215 -9 7 932 278 50 25 0 chr17 45497818 45497858 -49774793 + (TAGA)n Simple_repeat Simple_repeat 1 41 0 7 932 267 235 95 81 chr17 45497867 45497941 -49774710 + ID4_ SINE ID 3 77 -6 7 932 199 234 0 78 chr17 45497983 45498034 -49774617 + MIRb SINE MIR 119 165 -103 7 932 457 223 133 9 chr17 45498296 45498409 -49774242 + B1_Mur1 SINE Alu 21 147 -2 7 932 42 20 0 0 chr17 45498410 45498459 -49774192 + AT_rich Low_complexity Low_complexity 1 49 0 8 932 398 114 0 25 chr17 45498462 45498543 -49774108 + L1Md_F2 LINE L1 6502 6580 -2 8 932 839 277 97 99 chr17 45498793 45499227 -49773424 + RMER1C Other Other 786 1196 -146 8 932 204 40 0 0 chr17 45499227 45499252 -49773399 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 8 932 839 277 97 99 chr17 45499252 45499373 -49773278 + RMER1C Other Other 1197 1339 -3 8 932 312 27 0 0 chr17 45499695 45499732 -49772919 + (TAA)n Simple_repeat Simple_repeat 2 38 0 8 932 243 312 0 61 chr17 45499773 45499855 -49772796 + RSINE1 SINE B4 89 165 0 8 932 189 369 60 13 chr17 45500235 45500386 -49772265 - L2 LINE L2 -444 2975 2818 1 932 560 278 113 5 chr17 45501135 45501330 -49771321 + ID_B1 SINE B4 7 222 -2 2 932 233 213 21 0 chr17 45501373 45501420 -49771231 + B1_Mur4 SINE Alu 15 62 -88 3 932 387 112 12 24 chr17 45501464 45501546 -49771105 + (GGGA)n Simple_repeat Simple_repeat 1 81 0 4 932 317 318 37 64 chr17 45501843 45502031 -49770620 + MLT1I LTR MaLR 104 286 -125 5 932 546 82 0 0 chr17 45502794 45502879 -49769772 + (TG)n Simple_repeat Simple_repeat 2 86 0 6 932 3205 38 28 0 chr17 45502879 45503272 -49769379 - RLTR10A LTR ERVK -3 408 5 7 932 432 143 0 0 chr17 45503272 45503356 -49769295 + (TG)n Simple_repeat Simple_repeat 1 84 0 8 932 436 303 50 106 chr17 45504055 45504141 -49768510 + RMER30 DNA MER1_type 2 88 -114 9 932 702 167 51 139 chr17 45504141 45504185 -49768466 + B3A SINE B2 1 41 -157 1 932 1391 85 11 0 chr17 45504185 45504374 -49768277 + B2_Mm1a SINE B2 3 193 0 1 932 702 167 51 139 chr17 45504374 45504545 -49768106 + B3A SINE B2 42 197 -1 1 932 436 303 50 106 chr17 45504545 45504657 -49767994 + RMER30 DNA MER1_type 89 189 -13 9 932 415 302 143 51 chr17 45506116 45506332 -49766319 + B4A SINE B4 57 292 0 1 932 398 65 16 0 chr17 45507158 45507220 -49765431 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 932 180 325 123 26 chr17 45508768 45508923 -49763728 + MIRc SINE MIR 31 200 -68 1 932 1229 84 62 0 chr17 45511818 45511996 -49760655 + B2_Mm1t SINE B2 1 189 -4 1 932 510 246 42 8 chr17 45512145 45512264 -49760387 + RSINE1 SINE B4 2 124 -41 1 932 261 57 0 0 chr17 45512273 45512308 -49760343 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 932 464 45 30 0 chr17 45512324 45512390 -49760261 + (GAAA)n Simple_repeat Simple_repeat 3 70 0 1 932 719 99 24 30 chr17 45512409 45512575 -49760076 + (TAGA)n Simple_repeat Simple_repeat 4 168 0 1 932 293 272 148 128 chr17 45512689 45512946 -49759705 - LTR33 LTR ERVL -53 462 201 2 932 227 312 104 0 chr17 45513262 45513339 -49759312 + B4 SINE B4 2 86 -206 2 932 329 205 77 0 chr17 45513270 45513348 -49759303 + BC1_Mm scRNA scRNA 8 91 -61 2 932 1011 222 84 44 chr17 45513361 45513634 -49759017 + B4A SINE B4 8 291 -1 2 932 216 0 0 0 chr17 45513881 45513905 -49758746 + (TTC)n Simple_repeat Simple_repeat 2 25 0 2 932 185 111 79 53 chr17 45514770 45514808 -49757843 + MER5A DNA MER1_type 48 86 -103 2 932 274 319 34 42 chr17 45515047 45515165 -49757486 + B3A SINE B2 82 198 0 2 932 261 259 86 129 chr17 45515254 45515347 -49757304 + PB1D10 SINE Alu 22 110 -7 2 932 438 262 101 31 chr17 45515588 45515767 -49756884 + L1MA4 LINE L1 5655 5883 -414 2 932 799 191 17 23 chr17 45515767 45515944 -49756707 - B2_Mm2 SINE B2 -19 176 1 2 932 359 276 70 127 chr17 45515944 45515992 -49756659 + L1MA4 LINE L1 5825 5869 -11 2 932 478 232 6 17 chr17 45515996 45516176 -49756475 + (TTGG)n Simple_repeat Simple_repeat 1 178 0 3 932 391 257 124 0 chr17 45516181 45516286 -49756365 - B1F SINE Alu -7 142 25 3 932 220 222 203 16 chr17 45516240 45516304 -49756347 - B4 SINE B4 -137 155 80 3 932 301 254 85 34 chr17 45516311 45516429 -49756222 - L1M LINE L1 -754 5419 5296 3 932 569 175 10 0 chr17 45516742 45516845 -49755806 - PB1D10 SINE Alu -11 106 3 3 932 348 238 94 38 chr17 45516872 45516977 -49755674 - PB1D7 SINE Alu -29 120 1 3 932 2042 202 56 65 chr17 45517356 45517892 -49754759 - MT2A LTR ERVL 0 533 3 3 932 2113 152 25 52 chr17 45518362 45518730 -49753921 + MTC LTR MaLR 10 367 -54 3 932 763 250 20 0 chr17 45518802 45518954 -49753697 + RSINE1 SINE B4 8 162 -3 3 932 646 203 191 17 chr17 45519344 45519580 -49753071 + B4 SINE B4 11 287 -5 3 932 256 279 12 0 chr17 45519664 45519836 -49752815 + (CA)n Simple_repeat Simple_repeat 1 174 0 4 932 432 330 56 84 chr17 45520083 45520404 -49752247 + ORR1E LTR MaLR 44 355 -4 4 932 323 272 67 10 chr17 45520456 45520560 -49752091 + MER3 DNA MER1_type 99 208 -1 4 932 740 242 36 0 chr17 45521195 45521360 -49751291 + B3A SINE B2 3 173 -25 4 932 2383 143 8 3 chr17 45521650 45522022 -49750629 - ORR1C1 LTR MaLR -3 375 2 4 932 431 219 24 0 chr17 45522141 45522223 -49750428 + B4A SINE B4 209 292 0 4 932 278 239 33 33 chr17 45522444 45522535 -49750116 - Charlie1b DNA MER1_type -70 453 363 4 932 706 222 24 154 chr17 45522524 45522732 -49749919 - B3A SINE B2 -5 193 9 4 932 2544 157 72 27 chr17 45522835 45523058 -49749593 + RMER21A LTR ERV1 441 671 -276 4 932 1424 58 10 41 chr17 45523058 45523255 -49749396 + B2_Mm1a SINE B2 2 192 -1 4 932 2544 157 72 27 chr17 45523255 45523303 -49749348 + RMER21A LTR ERV1 672 734 -213 4 932 342 0 0 0 chr17 45523303 45523341 -49749310 + (GGGGA)n Simple_repeat Simple_repeat 4 41 0 5 932 2544 157 72 27 chr17 45523341 45523553 -49749098 + RMER21A LTR ERV1 735 947 0 4 932 516 267 40 24 chr17 45523642 45523830 -49748821 + Lx8 LINE L1 6846 7032 -664 5 932 730 113 16 16 chr17 45523950 45524076 -49748575 - RMER6B LTR ERVK -2 459 334 5 932 1282 207 117 53 chr17 45524147 45524524 -49748127 - RMER21A LTR ERV1 -546 401 1 5 932 255 31 0 0 chr17 45525241 45525273 -49747378 + (GA)n Simple_repeat Simple_repeat 2 33 0 5 932 1706 31 0 0 chr17 45526124 45526316 -49746335 + B2_Mm1t SINE B2 2 193 0 5 932 3707 163 130 61 chr17 45526566 45527407 -49745244 - RMER19B LTR ERVK 0 902 4 5 932 237 303 98 52 chr17 45527450 45527624 -49745027 - ORR1A1-int LTR MaLR -1606 186 5 5 932 423 257 40 87 chr17 45527937 45527956 -49744695 + ID_B1 SINE B4 83 224 0 5 932 571 234 46 15 chr17 45527956 45528086 -49744565 + B1F SINE Alu 16 149 0 5 932 187 409 22 11 chr17 45528089 45528178 -49744473 + L2b LINE L2 3238 3327 -48 6 932 270 0 0 0 chr17 45528201 45528231 -49744420 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 6 932 263 231 0 0 chr17 45528343 45528395 -49744256 - B1F SINE Alu -97 52 1 6 932 22 35 0 0 chr17 45528530 45528559 -49744092 + AT_rich Low_complexity Low_complexity 1 29 0 6 932 387 0 0 0 chr17 45530861 45530904 -49741747 + (CAGG)n Simple_repeat Simple_repeat 1 43 0 6 932 267 306 56 0 chr17 45531495 45531526 -49741125 + L1MB5 LINE L1 5736 5767 -407 6 932 207 0 0 0 chr17 45531526 45531549 -49741102 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 932 267 306 56 0 chr17 45531549 45531677 -49740974 + L1MB5 LINE L1 5768 5903 -271 6 932 398 208 53 60 chr17 45532096 45532229 -49740422 + B3A SINE B2 67 198 0 6 932 25 51 0 0 chr17 45532229 45532268 -49740383 + AT_rich Low_complexity Low_complexity 1 39 0 6 932 185 269 254 0 chr17 45532356 45532486 -49740165 - MER5B DNA MER1_type -1 177 15 6 932 207 0 0 0 chr17 45533385 45533408 -49739243 + (G)n Simple_repeat Simple_repeat 1 23 0 7 932 23 0 0 0 chr17 45533482 45533505 -49739146 + AT_rich Low_complexity Low_complexity 1 23 0 7 932 290 202 138 53 chr17 45533728 45533822 -49738829 + B1_Mur1 SINE Alu 47 148 -1 7 932 375 263 171 18 chr17 45533896 45534066 -49738585 + B3A SINE B2 1 196 -2 7 932 1316 111 11 0 chr17 45534575 45534764 -49737887 + B2_Mm1t SINE B2 1 191 -2 7 932 283 254 28 0 chr17 45534985 45535056 -49737595 + PB1D10 SINE Alu 45 117 0 7 932 283 274 0 52 chr17 45535060 45535137 -49737514 + ID4_ SINE ID 4 76 -7 7 932 1221 58 6 0 chr17 45535420 45535576 -49737075 + B2_Mm2 SINE B2 2 158 -37 7 932 180 0 0 0 chr17 45535577 45535597 -49737054 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 7 932 1191 105 52 6 chr17 45535624 45535797 -49736854 + B2_Mm2 SINE B2 1 181 -14 7 932 224 220 40 0 chr17 45536132 45536182 -49736469 + B4A SINE B4 28 79 -213 8 932 570 187 16 7 chr17 45536138 45536300 -49736351 + B3 SINE B2 35 195 0 8 932 778 235 48 29 chr17 45536310 45536516 -49736135 + B3 SINE B2 2 211 -5 8 932 257 300 50 8 chr17 45538265 45538382 -49734269 + L2b LINE L2 3266 3394 -32 8 932 591 267 67 41 chr17 45538847 45539042 -49733609 - B3 SINE B2 -2 214 15 8 932 180 0 0 0 chr17 45539867 45539887 -49732764 + (CAGAA)n Simple_repeat Simple_repeat 4 23 0 8 932 643 212 51 7 chr17 45540748 45540886 -49731765 + B1_Mus2 SINE Alu 2 145 -2 8 932 491 298 120 92 chr17 45541896 45542180 -49730471 + B4A SINE B4 1 292 0 8 932 398 108 48 0 chr17 45542180 45542263 -49730388 + (CA)n Simple_repeat Simple_repeat 2 88 0 8 932 248 209 110 55 chr17 45542441 45542532 -49730119 + MT2B LTR ERVL 187 282 -319 8 932 373 214 43 0 chr17 45542466 45542536 -49730115 + B1_Mur2 SINE Alu 64 136 -13 9 932 1224 48 0 0 chr17 45542556 45542702 -49729949 - B1_Mm SINE Alu -1 146 1 9 932 267 372 58 0 chr17 45542735 45542856 -49729795 - MIRb SINE MIR -86 182 55 9 932 275 212 198 26 chr17 45542953 45543069 -49729582 + MIRb SINE MIR 10 151 -117 9 932 377 311 53 20 chr17 45543079 45543230 -49729421 + RSINE1 SINE B4 10 165 0 9 932 1039 211 10 5 chr17 45543294 45543499 -49729152 + B3 SINE B2 1 206 -10 9 932 1099 34 0 70 chr17 45543509 45543667 -49728984 + B1_Mm SINE Alu 1 147 0 9 932 211 216 0 0 chr17 45543667 45543718 -49728933 + A-rich Low_complexity Low_complexity 1 51 0 9 932 367 314 71 0 chr17 45543871 45544011 -49728640 - MLT1A1 LTR MaLR -254 154 5 9 932 787 263 58 58 chr17 45544249 45544524 -49728127 + B4A SINE B4 1 275 -17 9 932 1062 182 121 0 chr17 45547467 45547665 -49724986 - URR1A DNA MER1_type -4 222 1 1 932 307 350 0 0 chr17 45547962 45548042 -49724609 + PB1D10 SINE Alu 1 80 -37 1 932 477 271 62 35 chr17 45548079 45548224 -49724427 + RSINE1 SINE B4 15 163 -2 1 932 752 186 0 0 chr17 45548492 45548616 -49724035 + B3 SINE B2 7 130 -86 1 932 270 225 110 27 chr17 45548674 45548747 -49723904 + ID SINE ID 2 80 -144 1 932 263 281 67 11 chr17 45548747 45548764 -49723887 + BC1_Mm scRNA scRNA 2 96 -56 1 932 320 290 206 41 chr17 45549324 45549543 -49723108 - Tigger15a DNA TcMar -457 258 4 1 932 309 200 93 0 chr17 45549548 45549623 -49723028 - L2c LINE L2 -68 3319 3238 1 932 819 196 40 0 chr17 45549780 45549928 -49722723 + B3 SINE B2 2 155 -61 1 932 478 291 9 9 chr17 45550451 45550562 -49722089 + ID_B1 SINE B4 83 193 -31 1 932 878 309 78 49 chr17 45551066 45551477 -49721174 + MLT1G3 LTR MaLR 109 531 -64 1 932 795 249 20 5 chr17 45552056 45552258 -49720393 + B3 SINE B2 2 206 -10 1 932 707 159 8 0 chr17 45553049 45553181 -49719470 + CT-rich Low_complexity Low_complexity 4 136 0 1 932 1240 90 89 11 chr17 45553190 45553370 -49719281 - B2_Mm2 SINE B2 -1 194 1 1 932 350 235 69 23 chr17 45553380 45553467 -49719184 - U6 snRNA snRNA -2 105 15 1 932 403 315 41 20 chr17 45554497 45554643 -49718008 - RSINE1 SINE B4 -13 152 4 1 932 372 317 65 8 chr17 45555009 45555133 -49717518 + RSINE1 SINE B4 4 134 -31 1 932 510 122 0 0 chr17 45555369 45555467 -49717184 + (CA)n Simple_repeat Simple_repeat 1 98 0 1 932 1104 50 7 21 chr17 45555598 45555741 -49716910 + B1_Mus1 SINE Alu 1 141 -7 1 932 279 0 0 0 chr17 45555744 45555775 -49716876 + (TATG)n Simple_repeat Simple_repeat 1 31 0 1 932 814 162 52 0 chr17 45555775 45555911 -49716740 + B1_Mur2 SINE Alu 7 149 0 1 932 974 194 63 26 chr17 45555978 45556169 -49716482 + B3 SINE B2 2 199 -17 1 932 225 265 260 20 chr17 45556258 45556358 -49716293 + RSINE1 SINE B4 42 165 0 1 932 714 219 23 37 chr17 45556999 45557217 -49715434 + RMER1A Other Other 815 1029 -1 1 932 562 138 276 0 chr17 45557229 45557345 -49715306 + B1_Mus1 SINE Alu 1 148 0 1 932 389 244 265 12 chr17 45557626 45557796 -49714855 - B3 SINE B2 -1 215 3 1 932 545 237 58 29 chr17 45557969 45558108 -49714543 + B1_Mur1 SINE Alu 2 144 -5 1 932 1375 74 0 6 chr17 45558367 45558543 -49714108 + B2_Mm2 SINE B2 2 176 -19 1 932 669 268 310 43 chr17 45558938 45559956 -49712695 + L1M4b LINE L1 113 1402 -5932 1 932 201 287 142 28 chr17 45561657 45561856 -49710795 + MIRb SINE MIR 24 245 -23 1 932 339 336 22 29 chr17 45562239 45562377 -49710274 - MIRc SINE MIR -98 170 34 1 932 202 247 0 25 chr17 45563870 45563949 -49708702 + T-rich Low_complexity Low_complexity 3 79 0 1 932 600 71 0 0 chr17 45563967 45564051 -49708600 - B1_Mus2 SINE Alu -12 135 52 1 932 546 157 33 57 chr17 45564049 45564171 -49708480 - B1_Mur1 SINE Alu -29 120 2 1 932 618 234 104 44 chr17 45565171 45565354 -49707297 + B3A SINE B2 3 196 -2 1 932 10877 77 23 70 chr17 45565376 45566087 -49706564 + L1_Mus1 LINE L1 4240 4945 -1622 1 932 1007 66 7 0 chr17 45566087 45566224 -49706427 - B1_Mus2 SINE Alu -1 146 9 1 932 10877 77 23 70 chr17 45566224 45567539 -49705112 + L1_Mus1 LINE L1 4946 6253 -314 1 932 1394 73 0 0 chr17 45567539 45567731 -49704920 + RLTR13B1 LTR ERVK 702 893 0 1 932 1494 43 0 16 chr17 45567731 45567921 -49704730 + L1_Mus1 LINE L1 6381 6567 0 1 932 216 0 0 0 chr17 45567924 45567948 -49704703 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1 932 398 84 0 0 chr17 45567963 45568026 -49704625 - B2_Mm2 SINE B2 -107 109 47 1 932 1073 107 58 12 chr17 45568055 45568226 -49704425 - B2_Mm2 SINE B2 -14 181 3 1 932 252 59 0 0 chr17 45568230 45568264 -49704387 + (A)n Simple_repeat Simple_repeat 1 34 0 1 932 707 292 43 11 chr17 45568789 45568976 -49703675 + ID_B1 SINE B4 23 215 -9 1 932 327 49 0 0 chr17 45570829 45570870 -49701781 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1 932 305 267 0 13 chr17 45572100 45572176 -49700475 - MER91B DNA Tip100 -24 166 92 1 932 410 279 22 44 chr17 45572619 45572754 -49699897 + MLT1C LTR MaLR 1 132 -335 1 932 1309 199 251 71 chr17 45573041 45573550 -49699101 + MT2B LTR ERVL 1 601 0 1 932 34518 127 48 11 chr17 45573550 45576964 -49695687 + MERVL_2A-int LTR ERVL 1 3569 -2192 1 932 1359 90 17 0 chr17 45576964 45577141 -49695510 + B2_Mm2 SINE B2 2 181 -14 1 932 34518 127 48 11 chr17 45577141 45578964 -49693687 + MERVL_2A-int LTR ERVL 3570 5435 -326 1 932 1002 96 0 33 chr17 45578979 45579130 -49693521 + B1_Mus1 SINE Alu 2 147 -1 1 932 838 143 7 39 chr17 45579133 45579286 -49693365 + MERVL_2A-int LTR ERVL 5543 5690 -71 1 932 282 206 0 52 chr17 45579294 45579371 -49693280 + ORR1A3-int LTR MaLR 567 639 -1324 1 932 333 104 0 0 chr17 45579375 45579423 -49693228 + MERVL_2A-int LTR ERVL 5714 5761 0 1 932 1461 204 140 86 chr17 45579423 45579993 -49692658 + MT2B LTR ERVL 1 601 0 1 932 1058 138 42 5 chr17 45580203 45580392 -49692259 + RLTR40 LTR ERVK 1 196 -621 1 932 231 167 0 0 chr17 45580448 45580490 -49692161 + (TTG)n Simple_repeat Simple_repeat 2 43 0 1 932 703 167 40 0 chr17 45580494 45580620 -49692031 - B1_Mur1 SINE Alu -7 142 12 1 932 1129 88 0 0 chr17 45580620 45580767 -49691884 + B1_Mus1 SINE Alu 2 148 0 1 932 272 242 0 0 chr17 45580795 45580857 -49691794 + RLTR40 LTR ERVK 199 260 -557 1 932 530 137 39 93 chr17 45580858 45580987 -49691664 + RLTR40 LTR ERVK 233 354 -463 1 932 1143 146 49 58 chr17 45581084 45581309 -49691342 - URR1B DNA MER1_type -2 223 1 1 932 639 282 44 0 chr17 45581445 45581651 -49691000 - B3 SINE B2 0 216 2 1 932 499 277 34 20 chr17 45581701 45581890 -49690761 - B3A SINE B2 0 195 2 1 932 755 142 22 47 chr17 45581927 45582113 -49690538 + B2_Mm2 SINE B2 1 184 -9 1 932 442 308 69 8 chr17 45582407 45582538 -49690113 - RSINE1 SINE B4 -24 141 3 1 932 684 259 76 0 chr17 45582836 45583033 -49689618 - B3 SINE B2 -4 212 1 1 932 621 236 238 20 chr17 45584507 45584805 -49687846 + MTEb LTR MaLR 3 365 -14 1 932 746 161 8 0 chr17 45584867 45584991 -49687660 + B1_Mur4 SINE Alu 11 135 -15 1 932 812 236 49 94 chr17 45585100 45585366 -49687285 + ORR1E LTR MaLR 89 342 -17 1 932 615 267 0 1 chr17 45585461 45585613 -49687038 + MLT1A0 LTR MaLR 230 390 -18 1 932 392 255 14 37 chr17 45586621 45586769 -49685882 + B4 SINE B4 1 136 -29 1 932 1140 75 0 0 chr17 45586809 45586955 -49685696 + B1_Mm SINE Alu 2 147 0 1 932 1526 139 73 141 chr17 45587451 45587527 -49685124 + MTC LTR MaLR 1 67 -354 1 932 976 67 89 0 chr17 45587527 45587662 -49684989 + B1_Mus1 SINE Alu 2 148 0 1 932 1526 139 73 141 chr17 45587662 45587969 -49684682 + MTC LTR MaLR 68 358 -63 1 932 805 192 0 0 chr17 45588182 45588312 -49684339 + B1_Mus1 SINE Alu 1 130 -18 1 932 288 224 0 0 chr17 45588312 45588379 -49684272 + (TA)n Simple_repeat Simple_repeat 1 67 0 1 932 711 253 100 21 chr17 45588802 45588992 -49683659 + B3 SINE B2 1 205 -11 1 932 23 0 0 0 chr17 45588992 45589015 -49683636 + AT_rich Low_complexity Low_complexity 1 23 0 1 932 504 226 20 0 chr17 45589031 45589133 -49683518 + RSINE1 SINE B4 2 105 -60 1 932 754 167 0 27 chr17 45590240 45590425 -49682226 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 932 759 304 33 15 chr17 45590624 45590898 -49681753 + B4A SINE B4 1 279 -13 1 932 808 285 140 47 chr17 45591368 45591776 -49680875 + Lx8 LINE L1 7028 7473 0 1 932 765 146 32 8 chr17 45591803 45591927 -49680724 + B1_Mur4 SINE Alu 3 129 -21 1 932 495 226 50 42 chr17 45591928 45592048 -49680603 + B3 SINE B2 86 206 -10 1 932 569 236 105 17 chr17 45592098 45592279 -49680372 + B4A SINE B4 39 235 -57 1 932 263 127 0 7 chr17 45592279 45592329 -49680322 - ID SINE ID -166 58 11 1 932 7354 23 4 0 chr17 45592371 45593190 -49679461 + RLTR13B2 LTR ERVK 1 822 0 1 932 198 0 0 0 chr17 45593358 45593380 -49679271 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 932 465 110 0 0 chr17 45594007 45594080 -49678571 + (TTTC)n Simple_repeat Simple_repeat 1 73 0 1 932 1385 79 11 11 chr17 45594391 45594582 -49678069 - B2_Mm2 SINE B2 -3 192 2 1 932 762 246 16 24 chr17 45594601 45594799 -49677852 - B3 SINE B2 -14 202 6 1 932 739 261 97 87 chr17 45594873 45594952 -49677699 - B4A SINE B4 0 292 231 1 932 1066 215 24 5 chr17 45594952 45595162 -49677489 - B3 SINE B2 -1 215 2 1 932 739 261 97 87 chr17 45595162 45595371 -49677280 - B4A SINE B4 -62 230 1 1 932 297 273 57 0 chr17 45596562 45596650 -49676001 + MTEa LTR MaLR 22 114 -265 1 932 672 164 0 0 chr17 45596708 45596842 -49675809 + (TCTA)n Simple_repeat Simple_repeat 2 135 0 1 932 431 166 12 37 chr17 45596903 45597066 -49675585 + (TCTCTG)n Simple_repeat Simple_repeat 2 160 0 1 932 225 250 211 24 chr17 45597077 45597200 -49675451 + MTEa LTR MaLR 201 346 -33 1 932 540 245 30 48 chr17 45597286 45597453 -49675198 - RSINE1 SINE B4 0 165 2 1 932 441 0 0 0 chr17 45597732 45597781 -49674870 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 932 183 129 0 0 chr17 45598202 45598233 -49674418 + (GGA)n Simple_repeat Simple_repeat 2 32 0 1 932 468 299 8 16 chr17 45598454 45598583 -49674068 + RSINE1 SINE B4 20 147 -18 1 932 216 97 0 0 chr17 45598584 45598615 -49674036 + (TGGG)n Simple_repeat Simple_repeat 2 32 0 1 932 295 138 59 139 chr17 45598615 45598716 -49673935 + B2_Mm2 SINE B2 99 191 -4 1 932 871 245 45 0 chr17 45598716 45598916 -49673735 + B3 SINE B2 4 212 -4 1 932 667 306 117 16 chr17 45598937 45599446 -49673205 + L1MB4 LINE L1 5586 6142 -41 1 932 383 151 11 0 chr17 45599484 45599577 -49673074 + (TG)n Simple_repeat Simple_repeat 1 94 0 1 932 833 178 29 86 chr17 45599577 45599786 -49672865 - B3 SINE B2 -13 203 7 1 932 1187 55 0 7 chr17 45600122 45600269 -49672382 + B1_Mus2 SINE Alu 2 147 0 1 932 198 0 0 0 chr17 45600269 45600291 -49672360 + (A)n Simple_repeat Simple_repeat 1 22 0 2 932 552 217 101 0 chr17 45600677 45600815 -49671836 + RSINE1 SINE B4 4 155 -10 2 932 297 0 0 0 chr17 45601028 45601061 -49671590 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 932 297 0 0 0 chr17 45601132 45601165 -49671486 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2 932 229 324 80 18 chr17 45601183 45601296 -49671355 - MIR SINE MIR -143 125 6 2 932 724 205 12 58 chr17 45601626 45601797 -49670854 + RSINE1 SINE B4 2 164 -1 2 932 468 0 0 0 chr17 45601905 45601957 -49670694 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 932 359 129 24 0 chr17 45601957 45602042 -49670609 + (CAGA)n Simple_repeat Simple_repeat 2 88 0 2 932 228 234 0 69 chr17 45602503 45602604 -49670047 + G-rich Low_complexity Low_complexity 4 97 0 2 932 332 233 67 0 chr17 45602608 45602698 -49669953 + ID_B1 SINE B4 2 97 -127 2 932 537 218 0 0 chr17 45603267 45603368 -49669283 + ID_B1 SINE B4 89 189 -35 2 932 1253 102 17 0 chr17 45603588 45603764 -49668887 - B2_Mm2 SINE B2 -14 181 3 2 932 932 154 78 16 chr17 45603798 45603989 -49668662 - B3 SINE B2 -12 204 2 2 932 1496 48 11 0 chr17 45603998 45604185 -49668466 - B2_Mm1t SINE B2 -4 189 1 2 932 356 253 53 32 chr17 45604499 45604593 -49668058 + B1F1 SINE Alu 2 97 -52 2 932 218 288 27 27 chr17 45604597 45604672 -49667979 + GA-rich Low_complexity Low_complexity 3 77 0 2 932 311 141 16 0 chr17 45604677 45604741 -49667910 + G-rich Low_complexity Low_complexity 4 68 0 2 932 225 212 152 55 chr17 45605073 45605218 -49667433 + L1MD LINE L1 2762 2920 -3226 2 932 470 242 82 97 chr17 45605286 45605393 -49667258 - Kanga1d DNA Tc2 0 609 497 2 932 733 239 72 0 chr17 45605393 45605573 -49667078 - B3A SINE B2 -4 194 2 2 932 470 242 82 97 chr17 45605573 45605671 -49666980 - Kanga1d DNA Tc2 -113 496 407 2 932 923 156 0 0 chr17 45605684 45605825 -49666826 + B1_Mur4 SINE Alu 2 142 -8 2 932 22 0 0 0 chr17 45605825 45605847 -49666804 + AT_rich Low_complexity Low_complexity 1 22 0 2 932 697 148 9 0 chr17 45605852 45605967 -49666684 + B1_Mur3 SINE Alu 9 124 -25 2 932 290 288 186 6 chr17 45605987 45606148 -49666503 - Kanga1d DNA Tc2 -228 381 192 2 932 394 289 6 66 chr17 45606258 45606425 -49666226 + RSINE1 SINE B4 9 165 0 2 932 228 295 0 154 chr17 45606450 45606554 -49666097 + B1_Mur2 SINE Alu 1 88 -61 2 932 246 250 36 0 chr17 45606580 45606636 -49666015 + RSINE1 SINE B4 84 141 -24 2 932 260 27 27 0 chr17 45606640 45606677 -49665974 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 932 211 0 0 160 chr17 45607114 45607208 -49665443 + (CCCCAG)n Simple_repeat Simple_repeat 2 80 0 2 932 918 210 0 0 chr17 45607363 45607539 -49665112 + B3A SINE B2 1 176 -22 2 932 815 170 0 20 chr17 45607549 45607699 -49664952 - B1_Mus1 SINE Alu 0 148 2 2 932 306 278 8 100 chr17 45607699 45607758 -49664893 - MT2B LTR ERVL -429 155 107 2 932 3972 122 30 11 chr17 45608069 45608677 -49663974 + Lx4A LINE L1 6427 7045 -13 2 932 441 0 0 0 chr17 45608677 45608726 -49663925 + (GAA)n Simple_repeat Simple_repeat 2 50 0 2 932 707 238 88 36 chr17 45609015 45609207 -49663444 + ID_B1 SINE B4 2 203 -21 2 932 4656 24 0 6 chr17 45609387 45609924 -49662727 + L1Md_F3 LINE L1 6030 6563 -21 2 932 368 252 0 19 chr17 45610427 45610532 -49662119 - ID_B1 SINE B4 -2 222 120 2 932 254 288 73 29 chr17 45610432 45610568 -49662083 - B1F1 SINE Alu -7 142 1 2 932 754 214 67 34 chr17 45610756 45610964 -49661687 + B3 SINE B2 1 215 -1 2 932 198 0 0 0 chr17 45611225 45611247 -49661404 + (A)n Simple_repeat Simple_repeat 1 22 0 2 932 1142 48 0 26 chr17 45612424 45612575 -49660076 + B1_Mus1 SINE Alu 2 148 0 2 932 204 289 0 0 chr17 45612575 45612620 -49660031 + polypurine Low_complexity Low_complexity 3 47 0 2 932 779 228 150 5 chr17 45612709 45612929 -49659722 - B4A SINE B4 -36 256 5 2 933 923 142 13 13 chr17 45613107 45613257 -49659394 + B1_Mur4 SINE Alu 1 150 0 2 933 636 171 16 47 chr17 45613560 45613689 -49658962 - B1_Mur1 SINE Alu 0 149 25 2 933 228 238 0 0 chr17 45614184 45614226 -49658425 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 933 784 263 147 4 chr17 45614226 45614478 -49658173 - B4A SINE B4 0 292 5 2 933 337 312 0 0 chr17 45615882 45615975 -49656676 + B4 SINE B4 1 93 -199 2 933 1322 101 6 3 chr17 45616105 45616331 -49656320 + ORR1B2 LTR MaLR 98 359 -8 2 933 278 273 0 61 chr17 45616711 45616793 -49655858 - B1_Mus1 SINE Alu -54 94 18 2 933 402 228 0 109 chr17 45616803 45616941 -49655710 + MT2B LTR ERVL 142 264 -337 2 933 1064 36 0 0 chr17 45616833 45616970 -49655681 + B1_Mus1 SINE Alu 6 142 -6 2 933 1260 99 5 5 chr17 45616978 45617171 -49655480 + B2_Mm1a SINE B2 1 193 0 2 933 945 121 18 0 chr17 45617173 45617338 -49655313 + (GA)n Simple_repeat Simple_repeat 2 169 0 2 933 223 106 0 60 chr17 45617338 45617388 -49655263 + GA-rich Low_complexity Low_complexity 3 49 0 2 933 1102 43 159 0 chr17 45617486 45617649 -49655002 + B2_Mm2 SINE B2 2 190 -5 2 933 602 325 58 0 chr17 45617956 45618156 -49654495 + ORR1E LTR MaLR 21 232 -127 2 933 275 303 51 138 chr17 45618156 45618432 -49654219 - RLTR14 LTR ERV1 0 382 131 2 933 1185 192 100 28 chr17 45618497 45618786 -49653865 + RLTR24 LTR ERV1 1 310 -219 2 933 225 191 21 0 chr17 45619022 45619069 -49653582 + RMER21B LTR ERV1 520 567 -275 2 933 1288 158 90 11 chr17 45619124 45619392 -49653259 + RLTR24 LTR ERV1 213 501 -28 2 933 286 277 56 65 chr17 45619522 45619630 -49653021 + ORR1E LTR MaLR 263 369 -10 2 933 1716 135 12 43 chr17 45619633 45619958 -49652693 - RMER20A LTR ERVK -191 325 11 2 933 360 320 21 23 chr17 45621195 45621331 -49651320 - L1MEf LINE L1 -4023 2101 1937 2 933 970 101 7 20 chr17 45621331 45621483 -49651168 - B1_Mur4 SINE Alu 0 150 1 2 933 360 316 22 22 chr17 45621483 45621498 -49651153 - L1MEf LINE L1 -4264 1936 1922 2 933 378 0 0 0 chr17 45621602 45621644 -49651007 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 933 1799 143 6 13 chr17 45621644 45621694 -49650957 - ORR1A2 LTR MaLR -3 324 275 2 933 1387 69 32 0 chr17 45621694 45621883 -49650768 - B2_Mm2 SINE B2 0 195 1 2 933 1799 143 6 13 chr17 45621883 45622143 -49650508 - ORR1A2 LTR MaLR -53 274 16 2 933 830 159 0 9 chr17 45622150 45622386 -49650265 + (TG)n Simple_repeat Simple_repeat 1 233 0 2 933 230 242 29 108 chr17 45622519 45622621 -49650030 - MLT1I LTR MaLR 0 411 318 2 933 528 309 19 108 chr17 45623040 45623254 -49649397 - B3A SINE B2 -1 197 3 2 933 1153 102 42 11 chr17 45623297 45623486 -49649165 + B2_Mm2 SINE B2 1 195 0 2 933 825 45 18 0 chr17 45623492 45623604 -49649047 + B1_Mus1 SINE Alu 33 146 -2 2 933 893 113 0 7 chr17 45623604 45623746 -49648905 + (GAAA)n Simple_repeat Simple_repeat 2 142 0 2 933 547 65 57 0 chr17 45624752 45624842 -49647809 - B1_Mm SINE Alu -9 138 1 2 933 1443 45 0 0 chr17 45624867 45625046 -49647605 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 933 214 274 0 0 chr17 45625057 45625108 -49647543 - B3 SINE B2 -79 137 87 2 933 366 61 0 0 chr17 45625108 45625157 -49647494 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 933 207 0 0 0 chr17 45625157 45625180 -49647471 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 933 369 198 0 0 chr17 45625181 45625302 -49647349 + GA-rich Low_complexity Low_complexity 1 121 0 2 933 267 209 0 82 chr17 45625699 45625772 -49646879 + L1MB7 LINE L1 5923 5989 -195 2 933 493 235 54 86 chr17 45625868 45626054 -49646597 + B3A SINE B2 2 181 -17 2 933 423 195 0 22 chr17 45626067 45626156 -49646495 + ID_B1 SINE B4 133 219 -5 2 933 408 237 57 36 chr17 45626187 45626327 -49646324 + B1F2 SINE Alu 2 144 -5 2 933 524 285 124 4 chr17 45626637 45626894 -49645757 - B4A SINE B4 -4 288 1 2 933 423 320 32 0 chr17 45627348 45627504 -49645147 + RSINE1 SINE B4 3 163 -2 2 933 180 234 0 0 chr17 45627693 45627740 -49644911 + (TATATG)n Simple_repeat Simple_repeat 4 50 0 2 933 281 253 13 26 chr17 45628314 45628391 -49644260 + ID_B1 SINE B4 81 156 -68 2 933 653 196 65 0 chr17 45628392 45628530 -49644121 + B1_Mur3 SINE Alu 3 149 0 2 933 284 284 0 43 chr17 45628791 45628880 -49643771 - ID_B1 SINE B4 -3 221 137 2 933 1146 194 128 36 chr17 45628880 45629184 -49643467 - IAPEY3_LTR LTR ERVK 0 332 1 2 933 285 310 69 20 chr17 45629199 45629301 -49643350 - ID_B1 SINE B4 -112 112 6 2 933 297 128 0 0 chr17 45629859 45629906 -49642745 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 933 1345 86 21 0 chr17 45630666 45630852 -49641799 + B2_Mm2 SINE B2 1 190 -5 2 933 304 351 156 0 chr17 45630911 45631065 -49641586 + MIR SINE MIR 32 209 -53 2 933 217 194 0 6 chr17 45631139 45631193 -49641458 + MIRm SINE MIR 214 266 -2 2 933 360 0 0 0 chr17 45631635 45631675 -49640976 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 933 279 0 0 0 chr17 45631678 45631709 -49640942 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 2 933 591 53 0 0 chr17 45632004 45632079 -49640572 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 2 933 212 0 36 0 chr17 45632162 45632190 -49640461 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2 933 566 223 54 12 chr17 45632201 45632369 -49640282 + B4A SINE B4 118 292 0 2 933 210 224 88 15 chr17 45632962 45633030 -49639621 - B1F2 SINE Alu -30 119 47 2 933 315 65 0 0 chr17 45633071 45633117 -49639534 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 933 291 114 0 0 chr17 45633219 45633263 -49639388 + (GGA)n Simple_repeat Simple_repeat 3 46 0 2 933 1423 44 38 5 chr17 45633503 45633687 -49638964 - B2_Mm2 SINE B2 -5 190 1 3 933 293 281 137 24 chr17 45633691 45633815 -49638836 - B2_Mm1t SINE B2 -1 192 55 3 933 317 244 25 13 chr17 45633800 45633879 -49638772 - B1F SINE Alu -12 137 58 3 933 387 0 0 0 chr17 45633879 45633922 -49638729 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 933 782 30 0 0 chr17 45633922 45634021 -49638630 - B1_Mus2 SINE Alu -11 136 38 3 933 319 208 46 65 chr17 45633946 45634054 -49638597 - MT2B LTR ERVL -337 264 159 3 933 613 253 6 19 chr17 45634166 45634323 -49638328 + ID_B1 SINE B4 70 224 0 3 933 845 220 74 15 chr17 45634391 45634572 -49638079 + B3 SINE B2 1 191 -25 3 933 531 82 0 0 chr17 45634572 45634645 -49638006 + (TG)n Simple_repeat Simple_repeat 2 74 0 3 933 845 220 74 15 chr17 45634645 45634666 -49637985 + B3 SINE B2 192 213 -3 3 933 575 295 42 0 chr17 45634770 45634929 -49637722 + ID_B1 SINE B4 2 167 -57 3 933 244 86 0 0 chr17 45634929 45634964 -49637687 + RMER19B LTR ERVK 1 35 -867 3 933 1073 103 0 0 chr17 45634965 45635111 -49637540 + B1_Mus1 SINE Alu 3 148 0 3 933 432 91 0 0 chr17 45635112 45635178 -49637473 + (A)n Simple_repeat Simple_repeat 1 66 0 3 933 4958 134 11 75 chr17 45635179 45636112 -49636539 + RMER19B LTR ERVK 30 902 0 3 933 250 257 14 14 chr17 45636431 45636502 -49636149 - ID4 SINE ID -11 72 2 3 933 1222 94 10 10 chr17 45636564 45636757 -49635894 - B2_Mm2 SINE B2 -2 193 1 3 933 417 233 92 33 chr17 45636811 45636931 -49635720 - B1_Mus2 SINE Alu 0 147 21 3 933 237 267 0 74 chr17 45637002 45637083 -49635568 - MER58D DNA MER1_type -48 338 264 3 933 234 261 56 28 chr17 45637429 45637500 -49635151 + MER5A1 DNA MER1_type 1 73 -93 3 933 488 318 45 0 chr17 45637503 45637657 -49634994 + RSINE1 SINE B4 3 163 -2 3 933 212 143 48 0 chr17 45637658 45637700 -49634951 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 3 933 243 239 0 0 chr17 45637836 45637903 -49634748 + (TA)n Simple_repeat Simple_repeat 2 68 0 3 933 4138 113 97 9 chr17 45637928 45638667 -49633984 + RMER17D2 LTR ERVK 2 805 -4 3 933 363 73 0 0 chr17 45638667 45638722 -49633929 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 3 933 792 274 70 26 chr17 45638722 45638992 -49633659 - B4 SINE B4 -10 282 1 3 933 2150 146 53 12 chr17 45639834 45640250 -49632401 + RMER10A LTR ERVL 2 434 -8 3 933 705 12 0 0 chr17 45640250 45640332 -49632319 + (TC)n Simple_repeat Simple_repeat 1 82 0 3 933 511 214 27 67 chr17 45640799 45640949 -49631702 + B3A SINE B2 14 157 -41 3 933 273 83 83 0 chr17 45640953 45641013 -49631638 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 3 933 180 0 0 0 chr17 45641020 45641040 -49631611 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 933 538 312 74 25 chr17 45641060 45641303 -49631348 + L1MB8 LINE L1 5879 6133 -45 3 933 699 230 58 19 chr17 45641624 45641832 -49630819 - ID_B1 SINE B4 -7 217 2 3 933 993 238 61 46 chr17 45641815 45642141 -49630510 + RMER10A LTR ERVL 1 331 -111 3 933 547 226 53 0 chr17 45642089 45642222 -49630429 - B1_Mur4 SINE Alu 0 150 11 3 933 1005 119 222 0 chr17 45642675 45642860 -49629791 - URR1A DNA MER1_type 0 226 1 3 933 224 302 0 0 chr17 45644286 45644349 -49628302 - L2a LINE L2 0 3426 3364 3 933 494 350 129 34 chr17 45644747 45645010 -49627641 + B4 SINE B4 1 288 -4 3 933 499 321 7 0 chr17 45646536 45646673 -49625978 - B4 SINE B4 -154 138 1 3 933 1454 53 11 0 chr17 45647001 45647191 -49625460 - B2_Mm1a SINE B2 0 193 2 3 933 386 159 0 11 chr17 45647620 45647709 -49624942 + (TG)n Simple_repeat Simple_repeat 1 88 0 3 933 832 215 66 9 chr17 45647709 45647919 -49624732 - B3A SINE B2 -2 214 1 3 933 327 345 111 68 chr17 45648218 45648470 -49624181 - MLT1H LTR MaLR -70 479 217 3 933 518 296 60 3 chr17 45648470 45648633 -49624018 - ID_B1 SINE B4 -41 251 82 3 933 336 287 98 30 chr17 45648605 45648738 -49623913 - MLT1H LTR MaLR -355 194 53 3 933 540 0 0 0 chr17 45649255 45649315 -49623336 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 3 933 842 277 9 18 chr17 45649334 45649558 -49623093 - ID_B1 SINE B4 -2 222 1 3 933 409 239 45 27 chr17 45649565 45649677 -49622974 + B1_Mur1 SINE Alu 23 136 -13 3 933 2193 47 0 0 chr17 45649680 45649954 -49622697 - L1Md_A LINE L1 0 6582 6309 3 933 1554 184 84 72 chr17 45650043 45650227 -49622424 - MTD LTR MaLR -8 411 202 3 933 1121 57 0 0 chr17 45650227 45650367 -49622284 - B1_Mus2 SINE Alu -6 141 2 3 933 1554 184 84 72 chr17 45650367 45650586 -49622065 - MTD LTR MaLR -218 201 3 3 933 190 27 0 98 chr17 45650765 45650806 -49621845 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 3 933 614 186 0 98 chr17 45650819 45650967 -49621684 - B1_Mus1 SINE Alu 0 149 19 3 933 237 65 0 0 chr17 45656372 45656403 -49616248 + (GGGA)n Simple_repeat Simple_repeat 1 31 0 3 933 525 165 21 0 chr17 45657646 45657743 -49614908 + B3A SINE B2 2 100 -98 3 933 195 42 0 0 chr17 45657787 45657811 -49614840 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 933 342 307 45 26 chr17 45657873 45658027 -49614624 + B3 SINE B2 16 172 -44 3 933 548 209 99 15 chr17 45658570 45658701 -49613950 - B1_Mur1 SINE Alu -2 147 6 3 933 1320 68 11 0 chr17 45658734 45658911 -49613740 + B2_Mm1a SINE B2 1 179 -14 3 933 421 281 62 0 chr17 45658968 45659096 -49613555 + B4 SINE B4 1 136 -156 3 933 272 315 61 26 chr17 45659119 45659233 -49613418 + B4 SINE B4 124 241 -51 3 933 403 269 89 13 chr17 45659534 45659692 -49612959 + ID_B1 SINE B4 2 171 -53 3 933 297 51 0 0 chr17 45659914 45659953 -49612698 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 933 255 31 0 0 chr17 45661074 45661106 -49611545 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 3 933 279 306 170 13 chr17 45661745 45661904 -49610747 + MIRb SINE MIR 80 263 -5 3 933 847 141 163 20 chr17 45662682 45662878 -49609773 - URR1A DNA MER1_type -2 224 1 3 933 845 123 7 0 chr17 45663102 45663240 -49609411 + (TTCC)n Simple_repeat Simple_repeat 4 142 0 3 933 906 192 82 0 chr17 45664489 45664671 -49607980 + B3 SINE B2 1 197 -19 3 933 348 24 0 0 chr17 45664671 45664712 -49607939 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 933 189 107 0 0 chr17 45664712 45664739 -49607912 + (TA)n Simple_repeat Simple_repeat 1 28 0 3 933 587 258 52 47 chr17 45664889 45665080 -49607571 - B3A SINE B2 -5 193 2 3 933 505 204 26 26 chr17 45665118 45665234 -49607417 - B1_Mus1 SINE Alu -19 129 14 3 933 740 231 70 0 chr17 45665130 45665316 -49607335 - ID_B1 SINE B4 -25 199 1 3 933 242 286 0 60 chr17 45665392 45665459 -49607192 - ID4 SINE ID -3 80 18 3 933 223 280 12 118 chr17 45665396 45665481 -49607170 - ID SINE ID -147 77 2 3 933 697 158 104 15 chr17 45665520 45665655 -49606996 + B1_Mus1 SINE Alu 1 147 -1 3 933 183 205 0 0 chr17 45665655 45665694 -49606957 + GA-rich Low_complexity Low_complexity 2 40 0 3 933 350 317 0 0 chr17 45665721 45665825 -49606826 - PB1D10 SINE Alu -13 104 1 3 933 312 336 0 9 chr17 45665864 45665969 -49606682 + ID_B1 SINE B4 79 182 -42 3 933 1017 104 67 57 chr17 45665981 45666174 -49606477 + B2_Mm2 SINE B2 1 195 0 3 933 252 239 127 0 chr17 45666180 45666251 -49606400 + ID4_ SINE ID 2 81 -2 3 933 802 134 20 40 chr17 45666363 45666511 -49606140 + B1_Mur2 SINE Alu 5 149 0 3 933 289 250 31 104 chr17 45666976 45667106 -49605545 - MIRb SINE MIR -77 185 68 3 933 558 138 11 0 chr17 45667132 45667219 -49605432 - B1_Mur2 SINE Alu -43 106 19 3 933 216 0 0 0 chr17 45668132 45668156 -49604495 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 933 533 39 0 61 chr17 45668156 45668227 -49604424 - B1_Mur4 SINE Alu -10 140 70 3 933 25 0 0 0 chr17 45668377 45668402 -49604249 + AT_rich Low_complexity Low_complexity 1 25 0 3 933 700 186 0 0 chr17 45668402 45668526 -49604125 + B1_Mus1 SINE Alu 3 126 -22 3 933 1356 81 32 5 chr17 45668623 45668810 -49603841 - B2_Mm2 SINE B2 -2 193 2 3 933 402 287 98 0 chr17 45668936 45669058 -49603593 + ID_B1 SINE B4 83 216 -8 3 933 632 173 186 68 chr17 45669282 45669443 -49603208 + B3A SINE B2 3 182 -16 3 933 340 304 143 6 chr17 45669717 45669899 -49602752 - MIRb SINE MIR -57 211 5 3 933 504 257 0 0 chr17 45670427 45670656 -49601995 + (CA)n Simple_repeat Simple_repeat 1 229 0 3 933 1207 42 14 0 chr17 45671302 45671446 -49601205 + B1_Mus1 SINE Alu 1 146 -2 3 933 432 0 0 0 chr17 45671446 45671494 -49601157 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 933 180 0 0 0 chr17 45672418 45672438 -49600213 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 3 933 600 221 29 110 chr17 45672446 45672619 -49600032 - ID_B1 SINE B4 -10 214 56 3 933 237 341 24 0 chr17 45672634 45672719 -49599932 + BC1_Mm scRNA scRNA 3 89 -63 3 933 641 251 52 102 chr17 45672750 45673173 -49599478 - MTEb LTR MaLR -10 369 1 3 933 494 215 58 0 chr17 45673185 45673306 -49599345 - MER53 DNA hAT -62 131 4 3 933 504 229 23 2 chr17 45673537 45673670 -49598981 + MTEb LTR MaLR 232 379 0 3 933 640 320 22 22 chr17 45673711 45673935 -49598716 + ID_B1 SINE B4 1 224 0 3 933 436 236 172 35 chr17 45673932 45674077 -49598574 + B3A SINE B2 7 171 -27 3 933 180 111 0 0 chr17 45674109 45674136 -49598515 + (GGGA)n Simple_repeat Simple_repeat 3 29 0 3 933 1183 62 0 7 chr17 45674230 45674377 -49598274 + B1_Mus2 SINE Alu 2 147 0 4 933 454 215 32 40 chr17 45674584 45674726 -49597925 - MTD LTR MaLR -34 385 205 4 933 622 288 35 45 chr17 45674832 45675032 -49597619 - B3A SINE B2 0 198 1 4 933 602 282 55 0 chr17 45675032 45675194 -49597457 - MTD LTR MaLR -206 213 42 4 933 21 0 0 0 chr17 45677101 45677122 -49595529 + GC_rich Low_complexity Low_complexity 1 21 0 4 933 487 293 77 29 chr17 45677273 45677519 -49595132 - B4A SINE B4 -3 289 32 4 933 464 48 16 0 chr17 45677593 45677656 -49594995 + (ATTG)n Simple_repeat Simple_repeat 4 67 0 4 933 607 193 26 0 chr17 45677658 45677772 -49594879 - B1_Mur2 SINE Alu -16 133 17 4 933 324 221 0 0 chr17 45678660 45678737 -49593914 + (CA)n Simple_repeat Simple_repeat 2 78 0 4 933 414 125 0 0 chr17 45679422 45679502 -49593149 + (TG)n Simple_repeat Simple_repeat 2 81 0 4 933 441 0 0 0 chr17 45679940 45679989 -49592662 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 933 180 0 0 0 chr17 45681328 45681348 -49591303 + (A)n Simple_repeat Simple_repeat 1 20 0 4 933 181 343 127 50 chr17 45683117 45683298 -49589353 + MIRb SINE MIR 26 220 -48 4 933 209 257 80 67 chr17 45683295 45683370 -49589281 + MIR SINE MIR 26 101 -161 4 933 246 95 0 0 chr17 45683409 45683451 -49589200 + (TTGG)n Simple_repeat Simple_repeat 2 43 0 4 933 216 230 117 0 chr17 45683483 45683590 -49589061 + MIRb SINE MIR 136 262 0 4 933 359 211 93 37 chr17 45684978 45685086 -49587565 + L2c LINE L2 3258 3371 -16 4 933 288 102 0 0 chr17 45685149 45685198 -49587453 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 933 324 0 0 0 chr17 45685737 45685773 -49586878 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 933 207 69 0 0 chr17 45686288 45686317 -49586334 + (CCG)n Simple_repeat Simple_repeat 3 31 0 4 933 28 29 0 0 chr17 45686542 45686577 -49586074 + GC_rich Low_complexity Low_complexity 1 35 0 4 933 285 333 9 61 chr17 45687201 45687316 -49585335 + MIR SINE MIR 42 150 -58 4 933 186 317 50 0 chr17 45687540 45687600 -49585051 - L2b LINE L2 -94 3281 3219 4 933 276 197 14 0 chr17 45687825 45687896 -49584755 + PB1D10 SINE Alu 46 117 0 4 933 294 284 0 0 chr17 45687918 45687985 -49584666 + ID4 SINE ID 3 69 -14 4 933 1320 75 37 16 chr17 45688613 45688802 -49583849 + B2_Mm2 SINE B2 1 193 -2 4 933 227 259 35 0 chr17 45689455 45689513 -49583138 + MIRc SINE MIR 68 127 -141 4 933 241 77 58 0 chr17 45689517 45689569 -49583082 + (TTTTG)n Simple_repeat Simple_repeat 2 56 0 4 933 4259 134 118 7 chr17 45689916 45690677 -49581974 - Lx4B LINE L1 0 7058 6213 4 933 864 130 14 0 chr17 45690846 45690984 -49581667 + B1_Mus2 SINE Alu 6 145 -2 4 933 606 195 169 0 chr17 45691010 45691164 -49581487 - B3 SINE B2 0 216 37 4 933 2340 148 57 17 chr17 45691863 45692268 -49580383 + MTC LTR MaLR 1 421 0 4 933 277 318 16 8 chr17 45692349 45692476 -49580175 + (TGAA)n Simple_repeat Simple_repeat 1 128 0 4 933 181 265 88 0 chr17 45695780 45695848 -49576803 - L2c LINE L2 -229 3158 3085 4 933 321 26 0 0 chr17 45696451 45696489 -49576162 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 933 904 236 65 5 chr17 45697703 45697903 -49574748 + ID_B1 SINE B4 3 214 -10 4 933 22 0 0 0 chr17 45697982 45698004 -49574647 + GC_rich Low_complexity Low_complexity 1 22 0 4 933 209 253 0 0 chr17 45698227 45698302 -49574349 + T-rich Low_complexity Low_complexity 1 75 0 4 933 253 0 28 0 chr17 45698302 45698338 -49574313 - B1_Mm SINE Alu 0 147 111 4 933 1036 36 7 21 chr17 45698365 45698507 -49574144 + B1_Mus1 SINE Alu 9 148 0 4 933 659 165 0 25 chr17 45698530 45698648 -49574003 + PB1D9 SINE Alu 6 120 0 4 933 371 55 0 18 chr17 45698893 45698948 -49573703 + (TC)n Simple_repeat Simple_repeat 1 54 0 4 933 244 315 0 0 chr17 45699361 45699434 -49573217 - ID4_ SINE ID -9 74 2 4 933 490 216 34 55 chr17 45699437 45699586 -49573065 - B1F SINE Alu 0 149 6 4 933 761 122 49 35 chr17 45700456 45700600 -49572051 + B1_Mus2 SINE Alu 2 147 0 4 933 198 0 0 0 chr17 45700711 45700733 -49571918 + (GGTTG)n Simple_repeat Simple_repeat 1 22 0 4 933 195 42 0 0 chr17 45700893 45700917 -49571734 + (GCTG)n Simple_repeat Simple_repeat 1 24 0 4 933 273 302 92 87 chr17 45702346 45702415 -49570236 - B4A SINE B4 0 292 137 4 933 556 219 102 0 chr17 45702415 45702543 -49570108 - B1_Mur2 SINE Alu -2 147 7 4 933 273 302 92 87 chr17 45702543 45702579 -49570072 - B4A SINE B4 0 136 50 4 933 617 168 60 60 chr17 45702603 45702736 -49569915 - B1_Mus2 SINE Alu -6 141 9 4 933 323 244 12 24 chr17 45702738 45702822 -49569829 - PB1D10 SINE Alu -34 83 1 4 933 323 243 13 13 chr17 45702749 45702824 -49569827 - ID_B1 SINE B4 -70 154 80 4 933 291 222 97 0 chr17 45705616 45705688 -49566963 + PB1 SINE Alu 36 114 -13 4 933 325 317 4 15 chr17 45707338 45707513 -49565138 + CT-rich Low_complexity Low_complexity 1 173 0 4 933 21 0 0 0 chr17 45709258 45709279 -49563372 + AT_rich Low_complexity Low_complexity 1 21 0 4 933 432 0 0 0 chr17 45711801 45711849 -49560802 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 933 227 238 94 47 chr17 45712345 45712451 -49560200 + PB1D7 SINE Alu 3 113 -7 4 933 368 270 28 119 chr17 45712637 45712780 -49559871 + RSINE1 SINE B4 9 138 -27 4 933 207 0 0 0 chr17 45712803 45712826 -49559825 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 933 476 104 47 94 chr17 45712855 45712961 -49559690 + ORR1A2 LTR MaLR 2 102 -225 4 933 243 184 41 0 chr17 45712919 45712968 -49559683 - PB1D9 SINE Alu -67 53 3 4 933 252 232 79 34 chr17 45713025 45713114 -49559537 + B3 SINE B2 30 122 -94 4 933 237 65 0 0 chr17 45713155 45713186 -49559465 + (T)n Simple_repeat Simple_repeat 1 31 0 4 933 751 124 147 0 chr17 45713186 45713315 -49559336 - B1_Mus1 SINE Alu 0 148 1 4 933 738 151 21 14 chr17 45713356 45713497 -49559154 - B1_Mm SINE Alu 0 147 6 4 933 311 331 57 88 chr17 45713497 45713510 -49559141 - B4 SINE B4 -62 225 77 4 933 1136 170 14 34 chr17 45713535 45713742 -49558909 - B3 SINE B2 -13 203 1 4 933 1048 83 28 0 chr17 45713847 45713991 -49558660 + B1_Mus1 SINE Alu 1 148 0 4 933 21 0 0 0 chr17 45713993 45714014 -49558637 + AT_rich Low_complexity Low_complexity 1 21 0 4 933 331 131 0 0 chr17 45714014 45714075 -49558576 - B3A SINE B2 -150 66 6 4 933 545 301 14 0 chr17 45714195 45714338 -49558313 + B1F SINE Alu 3 147 -2 4 933 1274 14 7 0 chr17 45714342 45714488 -49558163 + B1_Mus1 SINE Alu 2 148 0 4 933 24 53 0 0 chr17 45714488 45714526 -49558125 + AT_rich Low_complexity Low_complexity 1 38 0 4 933 290 185 0 0 chr17 45714533 45714587 -49558064 + B3 SINE B2 1 54 -162 4 933 641 242 8 0 chr17 45714630 45714762 -49557889 + B1_Mus2 SINE Alu 4 136 -11 4 933 1106 70 21 0 chr17 45714762 45714904 -49557747 + B1_Mm SINE Alu 2 147 0 4 933 368 296 87 56 chr17 45714916 45715077 -49557574 + B3 SINE B2 27 192 -24 4 933 394 205 8 104 chr17 45715783 45715825 -49556826 + MT2B LTR ERVL 128 240 -361 4 933 585 84 0 0 chr17 45715825 45715908 -49556743 + B1_Mus1 SINE Alu 2 84 -64 4 933 835 180 45 23 chr17 45715902 45716078 -49556573 + B2_Mm2 SINE B2 16 195 0 4 933 1118 50 43 0 chr17 45716244 45716385 -49556266 + B1_Mus2 SINE Alu 1 147 0 4 933 793 123 6 60 chr17 45716882 45717045 -49555606 - B1_Mur4 SINE Alu 0 150 1 4 933 243 270 35 111 chr17 45717587 45717611 -49555040 - YREP_Mm Unknown Unknown -1483 329 182 4 933 1045 59 0 0 chr17 45717611 45717746 -49554905 + B1_Mus1 SINE Alu 8 142 -6 4 933 216 0 0 0 chr17 45717748 45717772 -49554879 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 4 933 324 0 0 0 chr17 45717798 45717834 -49554817 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 4 933 589 177 0 29 chr17 45718929 45719048 -49553603 + B3 SINE B2 1 115 -80 4 933 253 216 12 139 chr17 45719608 45719626 -49553025 + B4 SINE B4 79 85 -207 4 933 463 195 220 0 chr17 45719626 45719744 -49552907 + B1_Mur4 SINE Alu 2 145 -5 4 933 1364 79 45 0 chr17 45719767 45719945 -49552706 + B2_Mm2 SINE B2 2 187 -8 4 933 728 186 7 21 chr17 45720281 45720424 -49552227 - B1_Mus1 SINE Alu -1 147 7 4 933 756 189 20 9 chr17 45720554 45720736 -49551915 + B3 SINE B2 7 194 -1 4 933 803 160 27 34 chr17 45720765 45720914 -49551737 + B1_Mur4 SINE Alu 3 150 0 4 933 1346 139 23 18 chr17 45720965 45721185 -49551466 + URR1B DNA MER1_type 4 224 -1 4 933 585 269 164 0 chr17 45721755 45721926 -49550725 + ID_B1 SINE B4 1 199 -25 4 933 721 181 128 0 chr17 45723478 45723627 -49549024 + B3A SINE B2 9 176 -22 4 933 255 154 197 15 chr17 45723643 45723709 -49548942 + 4.5SRNA scRNA scRNA 9 86 -8 4 933 428 182 85 20 chr17 45723654 45723767 -49548884 + B1_Mus1 SINE Alu 35 149 -1 4 933 1117 113 42 16 chr17 45723818 45724007 -49548644 - B2_Mm2 SINE B2 -1 194 1 4 933 239 237 38 50 chr17 45724018 45724098 -49548553 - ID4 SINE ID -2 81 3 4 933 822 121 21 28 chr17 45724693 45724838 -49547813 + B1_Mus1 SINE Alu 1 144 -4 4 933 351 0 0 0 chr17 45724838 45724877 -49547774 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 4 933 1248 107 17 0 chr17 45724886 45725064 -49547587 + B2_Mm2 SINE B2 1 181 -14 4 933 258 56 0 0 chr17 45725078 45725114 -49547537 + (CAGA)n Simple_repeat Simple_repeat 4 39 0 5 933 618 234 130 5 chr17 45725589 45725774 -49546877 - ID_B1 SINE B4 -16 208 1 5 933 219 294 23 23 chr17 45729526 45729655 -49542996 + GA-rich Low_complexity Low_complexity 1 129 0 5 933 230 254 13 90 chr17 45730792 45730870 -49541781 - L2a LINE L2 -10 3416 3345 5 933 450 53 0 0 chr17 45731095 45731152 -49541499 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 933 207 0 0 0 chr17 45732940 45732963 -49539688 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 933 208 206 0 0 chr17 45733354 45733388 -49539263 + C-rich Low_complexity Low_complexity 1 34 0 5 933 695 122 45 0 chr17 45734488 45734536 -49538115 + polypyrimidine Low_complexity Low_complexity 116 163 0 5 933 1340 51 0 11 chr17 45734536 45734714 -49537937 + (TCTCC)n Simple_repeat Simple_repeat 1 176 0 5 933 695 122 45 0 chr17 45734714 45734821 -49537830 + polypyrimidine Low_complexity Low_complexity 2 115 0 5 933 420 20 0 0 chr17 45734898 45734947 -49537704 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 933 234 323 52 10 chr17 45735011 45735108 -49537543 + MER96B DNA hAT 8 108 -309 5 933 243 61 0 0 chr17 45735316 45735349 -49537302 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 933 394 228 104 0 chr17 45735417 45735564 -49537087 - B3A SINE B2 -34 182 6 5 933 732 199 14 0 chr17 45735574 45735720 -49536931 - B1_Mur1 SINE Alu 0 149 2 5 933 214 319 96 0 chr17 45735729 45735823 -49536828 - ID_B1 SINE B4 -28 196 94 5 933 275 177 16 0 chr17 45735837 45735899 -49536752 + (CATA)n Simple_repeat Simple_repeat 2 64 0 5 933 225 0 0 0 chr17 45736172 45736197 -49536454 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 5 933 180 77 0 0 chr17 45736758 45736784 -49535867 + (AGGGGG)n Simple_repeat Simple_repeat 4 29 0 5 933 990 188 59 5 chr17 45737052 45737255 -49535396 - B3 SINE B2 -2 214 1 5 933 663 257 69 55 chr17 45737687 45737905 -49534746 + ID_B1 SINE B4 2 222 -2 5 933 387 0 0 0 chr17 45739372 45739415 -49533236 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 933 443 215 8 0 chr17 45739650 45739771 -49532880 + (TA)n Simple_repeat Simple_repeat 2 123 0 5 933 346 216 9 4 chr17 45739843 45739953 -49532698 - PB1D9 SINE Alu 0 120 11 5 933 298 257 130 28 chr17 45740038 45740146 -49532505 + MTE2a LTR MaLR 1 119 -260 5 933 22 0 0 0 chr17 45740219 45740241 -49532410 + AT_rich Low_complexity Low_complexity 1 22 0 5 933 424 283 72 6 chr17 45740876 45741043 -49531608 + B3A SINE B2 1 178 -20 5 933 431 308 30 36 chr17 45741226 45741391 -49531260 + RMER10B LTR ERVL 235 398 0 5 933 450 254 35 35 chr17 45741391 45741531 -49531120 - B1_Mur2 SINE Alu -9 140 1 5 933 1423 55 0 6 chr17 45741547 45741729 -49530922 + B2_Mm2 SINE B2 1 181 -14 5 933 964 95 0 51 chr17 45741738 45741894 -49530757 - B1_Mus1 SINE Alu 0 148 1 5 933 1287 80 0 33 chr17 45742208 45742227 -49530424 - B2_Mm2 SINE B2 -18 177 164 5 933 252 0 0 0 chr17 45742227 45742255 -49530396 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 5 933 1287 80 0 33 chr17 45742255 45742417 -49530234 - B2_Mm2 SINE B2 -32 163 2 5 933 210 37 0 0 chr17 45742564 45742591 -49530060 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 933 757 269 35 30 chr17 45742744 45742943 -49529708 + B3 SINE B2 15 214 -2 5 933 1152 48 0 0 chr17 45742951 45743098 -49529553 + B1_Mus2 SINE Alu 1 147 0 5 933 991 214 39 15 chr17 45743108 45743312 -49529339 - B3 SINE B2 -1 215 7 5 933 864 233 27 58 chr17 45743319 45743356 -49529295 - B3 SINE B2 0 216 185 5 933 210 71 0 0 chr17 45743356 45743384 -49529267 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 933 1245 87 12 0 chr17 45743385 45743558 -49529093 - B2_Mm1t SINE B2 -15 178 4 5 933 864 233 27 58 chr17 45743558 45743741 -49528910 - B3 SINE B2 -32 184 1 5 933 246 229 0 0 chr17 45744030 45744078 -49528573 + B3 SINE B2 75 122 -94 5 934 371 287 96 70 chr17 45744241 45744428 -49528223 - MER34A LTR ERV1 -376 195 4 5 934 1026 261 46 8 chr17 45744468 45744731 -49527920 + Lx8 LINE L1 6459 6731 -742 5 934 598 113 124 39 chr17 45744791 45744920 -49527731 - B2_Mm2 SINE B2 -29 166 27 5 934 1244 75 48 0 chr17 45745008 45745194 -49527457 - B2_Mm2 SINE B2 0 195 1 5 934 232 116 70 0 chr17 45745195 45745238 -49527413 - B3 SINE B2 -169 47 2 5 934 321 26 0 0 chr17 45745281 45745319 -49527332 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 5 934 530 126 184 0 chr17 45745322 45745425 -49527226 - B2_Mm2 SINE B2 -72 123 2 5 934 451 200 195 55 chr17 45745457 45745621 -49527030 + Lx8 LINE L1 6961 7147 -326 5 934 252 289 61 30 chr17 45745619 45745783 -49526868 + Lx8 LINE L1 7301 7469 -4 5 934 308 278 92 57 chr17 45745874 45746015 -49526636 + ID_B1 SINE B4 79 224 0 5 934 1140 75 0 0 chr17 45746065 45746212 -49526439 + B1_Mus2 SINE Alu 1 147 0 5 934 681 184 7 14 chr17 45746249 45746387 -49526264 + B1_Mur4 SINE Alu 1 137 -13 5 934 183 42 0 0 chr17 45746389 45746413 -49526238 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 5 934 387 0 0 0 chr17 45747004 45747047 -49525604 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 934 4163 98 18 5 chr17 45747346 45747961 -49524690 + Lx4A LINE L1 6436 7058 0 5 934 284 197 27 40 chr17 45748306 45748380 -49524271 + MTD LTR MaLR 6 78 -343 5 934 1239 70 6 0 chr17 45748382 45748554 -49524097 + B2_Mm2 SINE B2 2 174 -21 5 934 727 230 130 19 chr17 45748554 45748762 -49523889 + MTD LTR MaLR 189 419 0 5 934 399 241 143 68 chr17 45749479 45749543 -49523108 + ID SINE ID 1 69 -155 5 934 931 144 164 5 chr17 45749543 45749738 -49522913 + URR1A DNA MER1_type 1 226 0 5 934 399 241 143 68 chr17 45749738 45749815 -49522836 + ID_B1 SINE B4 70 153 -71 5 934 675 258 122 70 chr17 45749815 45750157 -49522494 - ORR1D2 LTR MaLR -1 369 15 5 934 1214 34 0 0 chr17 45750227 45750374 -49522277 - B1_Mus2 SINE Alu 0 147 1 5 934 807 215 86 0 chr17 45750507 45750693 -49521958 - B3 SINE B2 0 216 15 5 934 211 337 0 12 chr17 45750622 45750706 -49521945 - RSINE1 SINE B4 -79 86 4 5 934 606 212 42 35 chr17 45750787 45750929 -49521722 + B1_Mur3 SINE Alu 1 143 -6 5 934 673 228 111 30 chr17 45750998 45751197 -49521454 + B3 SINE B2 1 215 -1 5 934 304 93 348 18 chr17 45751294 45751406 -49521245 - B2_Mm2 SINE B2 0 195 47 5 934 1223 83 0 0 chr17 45751457 45751626 -49521025 - B2_Mm2 SINE B2 -26 169 1 5 934 453 260 102 7 chr17 45751639 45751676 -49520975 + ID SINE ID 1 42 -182 5 934 333 47 0 0 chr17 45751676 45751719 -49520932 + (CTTG)n Simple_repeat Simple_repeat 4 46 0 5 934 453 260 102 7 chr17 45751719 45751828 -49520823 + ID_B1 SINE B4 43 161 -63 5 934 678 173 56 28 chr17 45752046 45752189 -49520462 + B1F2 SINE Alu 3 149 0 5 934 246 72 17 67 chr17 45752285 45752331 -49520320 + T-rich Low_complexity Low_complexity 15 58 0 5 934 1225 34 0 0 chr17 45752331 45752478 -49520173 - B1_Mm SINE Alu 0 147 1 5 934 246 72 17 67 chr17 45752478 45752491 -49520160 + T-rich Low_complexity Low_complexity 2 14 0 5 934 281 193 0 17 chr17 45752581 45752639 -49520012 - BC1_Mm scRNA scRNA -93 59 3 5 934 388 278 91 31 chr17 45753688 45753854 -49518797 + ID_B1 SINE B4 50 219 -73 5 934 896 205 60 28 chr17 45753966 45754182 -49518469 - MTD LTR MaLR 0 419 197 5 934 321 118 0 0 chr17 45754196 45754247 -49518404 + (TTG)n Simple_repeat Simple_repeat 3 53 0 5 934 783 133 0 23 chr17 45754248 45754379 -49518272 - B1_Mur4 SINE Alu -8 142 15 5 934 650 276 78 0 chr17 45754376 45754568 -49518083 - MTD LTR MaLR -212 207 1 5 934 422 271 209 10 chr17 45754681 45754868 -49517783 + ID_B1 SINE B4 1 224 0 5 934 554 250 8 0 chr17 45755091 45755219 -49517432 + ID_B1 SINE B4 87 215 -9 5 934 285 29 0 0 chr17 45755220 45755254 -49517397 + (CAA)n Simple_repeat Simple_repeat 3 36 0 5 934 304 323 119 8 chr17 45755264 45755398 -49517253 + RSINE1 SINE B4 3 151 -14 5 934 450 0 0 0 chr17 45755409 45755459 -49517192 + (TAAAA)n Simple_repeat Simple_repeat 4 53 0 5 934 1126 82 0 0 chr17 45755477 45755624 -49517027 + B1_Mm SINE Alu 1 147 0 5 934 346 286 56 63 chr17 45757001 45757143 -49515508 + B4A SINE B4 1 141 -151 5 934 1258 143 0 9 chr17 45757222 45757434 -49515217 + RMER19A LTR ERVK 1 210 -527 5 934 613 189 45 0 chr17 45757425 45757536 -49515115 - RMER19A LTR ERVK -409 328 213 5 934 760 38 9 71 chr17 45757594 45757706 -49514945 + U6 snRNA snRNA 1 105 -2 5 934 24 65 0 16 chr17 45757780 45757805 -49514846 + AT_rich Low_complexity Low_complexity 1 25 0 5 934 1456 68 0 5 chr17 45757805 45757997 -49514654 - B2_Mm2 SINE B2 -4 191 1 5 934 24 65 0 16 chr17 45757997 45758034 -49514617 + AT_rich Low_complexity Low_complexity 1 37 0 5 934 946 107 0 63 chr17 45758044 45758203 -49514448 + B1_Mur4 SINE Alu 1 149 -1 5 934 679 170 74 0 chr17 45758293 45758428 -49514223 - B1_Mur4 SINE Alu -5 145 1 5 934 1560 132 0 120 chr17 45758459 45758785 -49513866 + ORR1A4 LTR MaLR 2 288 -41 5 934 1146 61 0 0 chr17 45758786 45758933 -49513718 + B1_Mus1 SINE Alu 2 148 0 5 934 352 83 0 0 chr17 45758963 45759011 -49513640 + ORR1A4 LTR MaLR 274 321 -8 5 934 417 240 219 38 chr17 45759017 45759177 -49513474 + B3A SINE B2 1 189 -9 5 934 710 234 67 34 chr17 45759208 45759416 -49513235 + B3 SINE B2 2 216 0 5 934 1390 87 0 5 chr17 45759440 45759636 -49513015 + B2_Mm2 SINE B2 1 195 0 5 934 1119 48 7 7 chr17 45759918 45760066 -49512585 - B1_Mus1 SINE Alu 0 148 1 5 934 623 242 65 25 chr17 45760107 45760306 -49512345 + B3 SINE B2 2 208 -8 5 934 364 119 17 0 chr17 45760335 45760394 -49512257 + RMER19B LTR ERVK 839 898 -4 5 934 1136 68 0 0 chr17 45760395 45760542 -49512109 + B1_Mus2 SINE Alu 1 147 0 6 934 288 91 0 0 chr17 45760584 45760628 -49512023 + (T)n Simple_repeat Simple_repeat 1 44 0 6 934 1142 61 0 0 chr17 45760628 45760775 -49511876 - B1_Mus1 SINE Alu 0 148 2 6 934 904 129 0 13 chr17 45760812 45760961 -49511690 + B1_Mur4 SINE Alu 2 148 -2 6 934 507 210 244 43 chr17 45760977 45761141 -49511510 - B3 SINE B2 -13 203 7 6 934 564 81 0 34 chr17 45761156 45761245 -49511406 + B1_Mur4 SINE Alu 60 145 -5 6 934 697 244 24 6 chr17 45761267 45761432 -49511219 + RMER5 LTR ERV1 358 525 -9 6 934 769 232 60 5 chr17 45761457 45761656 -49510995 + B3 SINE B2 7 216 0 6 934 251 300 107 8 chr17 45761818 45761939 -49510712 + L1MC LINE L1 5431 5563 -2319 6 934 1048 15 65 14 chr17 45761958 45762097 -49510554 - B1_Mm SINE Alu -1 146 1 6 934 1068 62 14 0 chr17 45762609 45762755 -49509896 + B1_Mus1 SINE Alu 1 148 0 6 934 582 201 5 96 chr17 45763283 45763481 -49509170 + B3A SINE B2 1 180 -18 6 934 240 261 39 145 chr17 45763657 45763836 -49508815 + RMER17C LTR ERVK 146 305 -105 6 934 328 227 15 0 chr17 45764072 45764138 -49508513 + RSINE1 SINE B4 5 71 -94 6 934 573 206 0 38 chr17 45764241 45764372 -49508279 - RSINE1 SINE B4 -37 128 3 6 934 715 60 224 0 chr17 45765038 45765154 -49507497 - B1_Mus2 SINE Alu -1 146 5 6 934 21 0 0 0 chr17 45765602 45765623 -49507028 + AT_rich Low_complexity Low_complexity 1 21 0 6 934 1139 48 0 13 chr17 45765623 45765772 -49506879 - B1_Mus1 SINE Alu -1 147 1 6 934 468 0 0 0 chr17 45765810 45765862 -49506789 + (GA)n Simple_repeat Simple_repeat 1 52 0 6 934 243 0 0 0 chr17 45765936 45765963 -49506688 + (GA)n Simple_repeat Simple_repeat 1 27 0 6 934 242 296 69 30 chr17 45766431 45766532 -49506119 + B4A SINE B4 32 136 -156 6 934 558 125 82 16 chr17 45766686 45766815 -49505836 - B1_Mur4 SINE Alu 0 148 6 6 934 563 287 7 14 chr17 45767997 45768142 -49504509 - RSINE1 SINE B4 -13 152 9 6 934 383 303 10 0 chr17 45768146 45768245 -49504406 - PB1D10 SINE Alu -3 114 15 6 934 378 61 0 0 chr17 45768276 45768325 -49504326 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 6 934 664 203 171 27 chr17 45768325 45768512 -49504139 - ID_B1 SINE B4 -10 214 1 6 934 279 0 0 0 chr17 45769238 45769269 -49503382 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 934 1092 56 28 0 chr17 45770098 45770241 -49502410 + B1_Mm SINE Alu 1 147 0 6 934 180 97 0 0 chr17 45770241 45770272 -49502379 + (CAAAAA)n Simple_repeat Simple_repeat 1 31 0 6 934 597 139 2 0 chr17 45770502 45770605 -49502046 + B2_Mm2 SINE B2 1 105 -111 6 934 423 0 0 0 chr17 45771237 45771284 -49501367 + (GA)n Simple_repeat Simple_repeat 1 47 0 6 934 405 0 0 0 chr17 45771498 45771543 -49501108 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 6 934 388 243 0 93 chr17 45771745 45771863 -49500788 - PB1D10 SINE Alu 0 117 11 6 934 679 212 59 13 chr17 45771757 45771910 -49500741 - ID_B1 SINE B4 -23 201 42 6 934 389 209 87 11 chr17 45771944 45772036 -49500615 - ID_B1 SINE B4 0 224 126 6 934 247 257 48 153 chr17 45772036 45772068 -49500583 - PB1D10 SINE Alu 0 117 7 6 934 532 270 0 38 chr17 45772110 45772241 -49500410 + B1_Mur1 SINE Alu 9 134 -15 6 934 241 380 0 60 chr17 45772241 45772254 -49500397 + ID_B1 SINE B4 124 224 0 6 934 1027 96 0 7 chr17 45772273 45772420 -49500231 + B1_Mus1 SINE Alu 3 148 0 6 934 261 98 0 0 chr17 45772420 45772461 -49500190 + (A)n Simple_repeat Simple_repeat 1 41 0 6 934 574 250 38 0 chr17 45772669 45772801 -49499850 + ID_B1 SINE B4 87 223 -1 6 934 301 269 52 41 chr17 45772803 45772900 -49499751 + L1MEf LINE L1 1943 2040 -4160 6 934 207 0 0 0 chr17 45773022 45773045 -49499606 + (T)n Simple_repeat Simple_repeat 1 23 0 6 934 317 279 35 18 chr17 45773139 45773252 -49499399 - PB1D7 SINE Alu -5 115 1 6 934 373 168 3 0 chr17 45773563 45773649 -49499002 - B3 SINE B2 -91 104 18 6 934 30 0 0 0 chr17 45773654 45773684 -49498967 + AT_rich Low_complexity Low_complexity 1 30 0 6 934 525 263 0 13 chr17 45773684 45773842 -49498809 - RSINE1 SINE B4 -8 157 2 6 934 216 245 0 0 chr17 45773944 45773997 -49498654 - ID4 SINE ID -16 67 15 6 934 1599 36 0 0 chr17 45774231 45774423 -49498228 + B2_Mm1t SINE B2 2 193 0 6 934 999 85 0 7 chr17 45774598 45774740 -49497911 + B1_Mus1 SINE Alu 1 141 -7 6 934 855 78 0 0 chr17 45774740 45774856 -49497795 + (GAA)n Simple_repeat Simple_repeat 2 117 0 6 934 876 241 0 64 chr17 45774863 45775067 -49497584 + B3 SINE B2 1 191 -25 6 934 468 0 0 0 chr17 45775070 45775122 -49497529 + (GA)n Simple_repeat Simple_repeat 1 52 0 6 934 507 196 49 15 chr17 45775183 45775314 -49497337 + B1_Mus1 SINE Alu 11 148 0 6 934 339 194 0 0 chr17 45775340 45775438 -49497213 + A-rich Low_complexity Low_complexity 1 98 0 6 934 593 93 9 27 chr17 45775491 45775601 -49497050 + (GGA)n Simple_repeat Simple_repeat 2 109 0 6 934 263 247 245 10 chr17 45776944 45777042 -49495609 - B1F SINE Alu -28 121 1 6 934 423 0 0 0 chr17 45777049 45777096 -49495555 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 934 562 148 17 0 chr17 45777102 45777217 -49495434 + GA-rich Low_complexity Low_complexity 2 118 0 6 934 448 174 25 25 chr17 45777309 45777427 -49495224 - B3 SINE B2 -1 215 98 6 934 537 329 65 32 chr17 45777422 45777551 -49495100 - B4A SINE B4 -68 224 85 6 934 210 37 0 0 chr17 45777551 45777578 -49495073 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 934 537 329 65 32 chr17 45777578 45777608 -49495043 - B4A SINE B4 -208 84 58 6 934 333 0 0 0 chr17 45777608 45777645 -49495006 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 6 934 1179 36 0 7 chr17 45777645 45777784 -49494867 - B1_Mus1 SINE Alu -10 138 1 6 934 545 329 65 32 chr17 45777784 45777839 -49494812 - B4A SINE B4 -235 57 3 6 934 443 184 0 38 chr17 45777959 45778044 -49494607 + PB1D9 SINE Alu 25 107 -13 6 934 252 0 0 0 chr17 45778044 45778072 -49494579 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 6 934 443 264 26 848 chr17 45778072 45778117 -49494534 + PB1D9 SINE Alu 108 149 0 6 934 483 69 0 0 chr17 45778189 45778261 -49494390 + (TG)n Simple_repeat Simple_repeat 2 73 0 6 934 681 154 115 0 chr17 45778268 45778398 -49494253 - B3 SINE B2 -71 145 1 6 934 933 50 141 0 chr17 45778676 45778797 -49493854 + B1_Mm SINE Alu 1 138 -9 6 934 284 275 56 90 chr17 45778843 45778987 -49493664 - L1MD LINE L1 -464 5778 5640 6 934 323 333 10 10 chr17 45779027 45779130 -49493521 - L2a LINE L2 0 3426 3324 6 934 216 0 0 0 chr17 45779130 45779154 -49493497 + (A)n Simple_repeat Simple_repeat 1 24 0 6 934 243 0 0 0 chr17 45780047 45780074 -49492577 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 934 434 294 0 0 chr17 45780084 45780176 -49492475 - RSINE1 SINE B4 -64 101 10 6 934 234 0 0 0 chr17 45780392 45780418 -49492233 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 934 531 0 0 0 chr17 45780418 45780476 -49492175 + (GA)n Simple_repeat Simple_repeat 2 60 0 6 934 291 234 0 0 chr17 45780607 45780684 -49491967 + CT-rich Low_complexity Low_complexity 4 80 0 6 934 219 254 183 50 chr17 45781050 45781069 -49491582 + B4A SINE B4 83 218 -74 6 934 335 292 0 50 chr17 45781069 45781170 -49491481 + PB1D10 SINE Alu 13 108 -9 6 934 692 267 17 28 chr17 45781178 45781355 -49491296 + B3A SINE B2 2 176 -22 6 934 693 188 15 0 chr17 45781378 45781511 -49491140 + B1_Mus2 SINE Alu 13 147 0 6 934 537 104 0 0 chr17 45781518 45781595 -49491056 + B1_Mus1 SINE Alu 1 77 -71 6 934 2250 101 60 11 chr17 45781595 45781945 -49490706 + IAPLTR1_Mm LTR ERVK 1 367 0 6 934 8726 82 27 26 chr17 45781945 45783250 -49489401 + IAPEz-int LTR ERVK 8 1313 -5168 6 934 27839 21 1 0 chr17 45783249 45786515 -49486136 + IAPEz-int LTR ERVK 3210 6478 -3 6 934 2250 101 60 11 chr17 45786519 45786869 -49485782 + IAPLTR1_Mm LTR ERVK 1 367 0 6 934 596 26 0 0 chr17 45786869 45786946 -49485705 + B1_Mur4 SINE Alu 74 150 0 6 934 305 47 23 0 chr17 45786985 45787028 -49485623 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 934 662 230 0 83 chr17 45787041 45787221 -49485430 + B3A SINE B2 34 198 0 6 934 246 32 0 0 chr17 45787879 45787910 -49484741 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 934 267 274 57 81 chr17 45787910 45787990 -49484661 - ID_B1 SINE B4 -8 216 139 6 934 873 237 36 27 chr17 45787990 45788211 -49484440 - ID_B1 SINE B4 -1 223 1 6 934 267 274 57 81 chr17 45788211 45788253 -49484398 - ID_B1 SINE B4 -86 138 97 6 934 246 182 0 0 chr17 45788260 45788326 -49484325 + GA-rich Low_complexity Low_complexity 1 66 0 6 934 310 250 26 0 chr17 45788340 45788416 -49484235 + ID2 SINE ID 3 80 -3 6 934 1194 75 0 0 chr17 45788419 45788565 -49484086 + B1_Mus1 SINE Alu 1 146 -2 6 934 209 30 0 57 chr17 45788565 45788600 -49484051 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 6 934 778 215 0 39 chr17 45788612 45788767 -49483884 + B1_Mur1 SINE Alu 1 149 0 6 934 428 314 94 42 chr17 45788813 45789099 -49483552 + MLT1F1 LTR MaLR 216 516 -53 6 934 235 116 45 23 chr17 45789093 45789137 -49483514 - ID_B1 SINE B4 -6 218 174 6 934 234 175 86 17 chr17 45789137 45789148 -49483503 - PB1D10 SINE Alu -3 111 53 6 934 271 345 11 38 chr17 45789217 45789401 -49483250 + (TG)n Simple_repeat Simple_repeat 2 180 0 6 934 238 345 0 0 chr17 45789539 45789623 -49483028 + (TG)n Simple_repeat Simple_repeat 1 84 0 6 934 339 130 0 0 chr17 45789666 45789720 -49482931 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 934 357 311 0 75 chr17 45789729 45789889 -49482762 - B3A SINE B2 -48 150 3 7 934 23 0 0 0 chr17 45790048 45790071 -49482580 + GC_rich Low_complexity Low_complexity 1 23 0 7 934 186 103 0 0 chr17 45790711 45790740 -49481911 + (A)n Simple_repeat Simple_repeat 1 29 0 7 934 1031 191 23 23 chr17 45790861 45791075 -49481576 - B3 SINE B2 -2 214 1 7 934 285 29 0 0 chr17 45791098 45791132 -49481519 + (TCCA)n Simple_repeat Simple_repeat 3 36 0 7 934 608 246 23 23 chr17 45791133 45791262 -49481389 - B1_Mur1 SINE Alu -19 130 2 7 934 839 203 119 0 chr17 45791282 45791459 -49481192 - B3 SINE B2 -14 202 5 7 934 351 322 46 23 chr17 45791480 45791655 -49480996 - B3A SINE B2 -15 183 5 7 934 704 223 20 35 chr17 45791905 45792089 -49480562 + B3 SINE B2 1 195 -3 7 934 935 241 21 0 chr17 45792092 45792283 -49480368 + B3 SINE B2 2 196 -20 7 934 614 49 0 0 chr17 45792283 45792365 -49480286 + B1_Mus1 SINE Alu 2 83 -65 7 934 369 0 0 0 chr17 45792372 45792413 -49480238 + (CAAAC)n Simple_repeat Simple_repeat 2 42 0 7 934 267 122 102 0 chr17 45792460 45792509 -49480142 + B1_Mur3 SINE Alu 54 107 -42 7 934 416 88 302 50 chr17 45792547 45792666 -49479985 - B2_Mm2 SINE B2 0 195 47 7 934 306 0 0 0 chr17 45792727 45792761 -49479890 + (TTA)n Simple_repeat Simple_repeat 3 36 0 7 934 835 113 99 0 chr17 45792761 45792892 -49479759 - B2_Mm2 SINE B2 -36 159 15 7 934 2241 102 95 13 chr17 45793809 45794187 -49478464 + MTC LTR MaLR 1 409 -12 7 934 440 248 73 29 chr17 45794195 45794332 -49478319 + RMER15 LTR ERVL 397 539 -36 7 934 247 206 18 6 chr17 45794570 45794631 -49478020 + PB1D10 SINE Alu 10 68 -81 7 934 635 270 0 0 chr17 45794656 45794793 -49477858 - RSINE1 SINE B4 -4 161 25 7 934 722 272 26 57 chr17 45794999 45795229 -49477422 - ID_B1 SINE B4 0 224 2 7 934 661 277 26 16 chr17 45795229 45795435 -49477216 - B3A SINE B2 -8 208 2 7 934 490 246 89 8 chr17 45796655 45796778 -49475873 - ID_B1 SINE B4 0 224 92 7 934 381 238 36 0 chr17 45796828 45796912 -49475739 - RSINE1 SINE B4 -22 143 57 7 934 402 91 0 15 chr17 45796934 45797001 -49475650 - B1_Mus2 SINE Alu 0 147 82 7 934 201 74 0 0 chr17 45797146 45797173 -49475478 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 7 934 195 330 65 11 chr17 45800261 45800353 -49472298 - MIR3 SINE MIR -21 187 91 7 934 453 90 0 0 chr17 45801073 45801140 -49471511 + (CGTG)n Simple_repeat Simple_repeat 1 67 0 7 934 188 260 59 20 chr17 45802363 45802414 -49470237 - MIRb SINE MIR -14 254 202 7 934 237 33 0 0 chr17 45802755 45802785 -49469866 + (TG)n Simple_repeat Simple_repeat 2 31 0 7 934 430 214 0 58 chr17 45803817 45803848 -49468803 - ID_B1 SINE B4 -33 191 166 7 934 1184 107 60 22 chr17 45803848 45804030 -49468621 + B2_Mm2 SINE B2 1 189 -6 7 934 430 214 0 58 chr17 45804030 45804102 -49468549 - ID_B1 SINE B4 -59 165 94 7 934 260 193 140 0 chr17 45804107 45804164 -49468487 - ID4 SINE ID -18 65 1 7 934 225 343 87 70 chr17 45804232 45804243 -49468408 + B2_Mm1a SINE B2 1 56 -137 7 934 625 252 33 7 chr17 45804243 45804395 -49468256 + RSINE1 SINE B4 8 163 -2 7 934 225 343 87 70 chr17 45804395 45804417 -49468234 + B2_Mm1a SINE B2 57 188 -5 7 934 203 239 0 0 chr17 45804826 45804872 -49467779 + G-rich Low_complexity Low_complexity 2 47 0 7 934 1426 282 51 24 chr17 45804888 45805298 -49467353 + RCHARR1 DNA MER1_type 1 421 -553 7 934 302 160 73 66 chr17 45805446 45805537 -49467114 - B1_Mur4 SINE Alu 0 150 35 7 934 236 272 10 89 chr17 45805456 45805557 -49467094 - B4 SINE B4 -73 219 127 7 934 580 329 60 5 chr17 45805550 45805767 -49466884 - B4A SINE B4 -61 231 3 7 934 1429 55 37 21 chr17 45805808 45805995 -49466656 + B2_Mm2 SINE B2 1 190 -5 7 934 318 333 0 0 chr17 45806126 45806213 -49466438 - B4 SINE B4 -152 140 54 7 934 720 186 14 20 chr17 45806264 45806412 -49466239 - B1_Mus2 SINE Alu 0 147 1 7 934 440 254 42 0 chr17 45806412 45806529 -49466122 + RCHARR1 DNA MER1_type 839 960 -14 7 934 180 313 11 88 chr17 45808352 45808443 -49464208 + L2a LINE L2 3294 3377 -49 7 934 693 210 187 6 chr17 45808871 45809053 -49463598 + B3 SINE B2 1 215 -1 7 934 786 181 28 0 chr17 45809427 45809571 -49463080 - B1_Mur3 SINE Alu 0 149 2 7 934 243 0 0 0 chr17 45811360 45811387 -49461264 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 7 934 605 204 5 14 chr17 45811388 45811606 -49461045 + GA-rich Low_complexity Low_complexity 1 215 0 7 934 251 211 70 0 chr17 45812544 45812601 -49460050 + ID4 SINE ID 22 82 -1 7 934 876 222 40 31 chr17 45812616 45812839 -49459812 + B4 SINE B4 1 225 -67 7 934 504 291 39 8 chr17 45812839 45812967 -49459684 + RSINE1 SINE B4 1 132 -33 7 934 200 86 29 0 chr17 45813011 45813046 -49459605 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 7 934 327 191 0 0 chr17 45813117 45813185 -49459466 + (CA)n Simple_repeat Simple_repeat 1 68 0 7 934 620 319 6 0 chr17 45813297 45813457 -49459194 + RSINE1 SINE B4 4 164 -1 7 934 257 297 99 139 chr17 45813496 45813668 -49458983 + RSINE1 SINE B4 1 165 0 7 934 1718 31 0 0 chr17 45814426 45814619 -49458032 - B2_Mm1a SINE B2 0 193 1 7 934 1164 182 9 65 chr17 45816941 45817158 -49455493 + B3 SINE B2 5 209 -7 7 934 1268 47 0 0 chr17 45818364 45818512 -49454139 + B1_Mus1 SINE Alu 1 148 0 7 934 180 0 0 0 chr17 45818525 45818545 -49454106 + (CAA)n Simple_repeat Simple_repeat 2 21 0 7 934 760 183 73 28 chr17 45818621 45818820 -49453831 + B3 SINE B2 24 216 0 7 934 356 270 144 27 chr17 45818823 45819006 -49453645 - MIRb SINE MIR -62 206 7 7 934 219 255 0 0 chr17 45819142 45819189 -49453462 - PB1D10 SINE Alu -16 101 55 7 934 216 86 0 0 chr17 45819381 45819416 -49453235 + (TCTG)n Simple_repeat Simple_repeat 4 38 0 7 934 512 229 339 12 chr17 45819534 45819702 -49452949 - ID_B1 SINE B4 0 224 2 7 934 255 235 15 0 chr17 45820670 45820738 -49451913 - MIR SINE MIR -133 129 61 7 934 213 299 149 0 chr17 45820966 45821053 -49451598 + MIRb SINE MIR 99 198 -70 7 934 186 71 0 0 chr17 45821055 45821083 -49451568 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 7 934 274 247 37 12 chr17 45821181 45821263 -49451388 + PB1D10 SINE Alu 34 117 0 7 934 508 245 51 26 chr17 45821521 45821713 -49450938 - MIR SINE MIR -34 228 42 7 934 360 0 0 0 chr17 45824303 45824343 -49448308 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 934 272 328 83 15 chr17 45824541 45824674 -49447977 + ID_B1 SINE B4 82 223 -1 7 934 22 0 0 0 chr17 45825230 45825252 -49447399 + AT_rich Low_complexity Low_complexity 1 22 0 7 934 194 0 39 0 chr17 45825315 45825341 -49447310 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 934 811 116 0 0 chr17 45825341 45825455 -49447196 - B1_Mus1 SINE Alu -8 140 27 7 934 316 255 10 39 chr17 45825606 45825633 -49447018 - B4 SINE B4 -119 173 111 7 934 319 210 0 0 chr17 45825633 45825695 -49446956 - B1_Mur3 SINE Alu -87 62 1 7 934 316 255 10 39 chr17 45825695 45825708 -49446943 - B4 SINE B4 -119 110 75 7 934 252 0 0 0 chr17 45826470 45826498 -49446153 + (TTA)n Simple_repeat Simple_repeat 2 29 0 7 934 701 201 8 0 chr17 45826498 45826632 -49446019 - B1_Mur1 SINE Alu -14 135 1 7 934 1074 38 0 0 chr17 45826651 45826782 -49445869 + (TTTC)n Simple_repeat Simple_repeat 2 132 0 7 934 1214 48 0 0 chr17 45826782 45826921 -49445730 - B1_Mm SINE Alu -6 141 3 7 934 238 229 15 142 chr17 45827457 45827592 -49445059 - PB1D7 SINE Alu -1 119 1 7 934 299 221 22 55 chr17 45827748 45827839 -49444812 + RSINE1 SINE B4 43 130 -35 7 934 1272 135 76 19 chr17 45827996 45828207 -49444444 - URR1B DNA MER1_type -1 224 2 7 934 1005 130 0 14 chr17 45828251 45828399 -49444252 + B1_Mus2 SINE Alu 1 146 -1 7 934 216 367 33 0 chr17 45828470 45828560 -49444091 - L2a LINE L2 -35 3391 3299 7 934 629 158 8 50 chr17 45829366 45829486 -49443165 + PB1D9 SINE Alu 1 115 -5 7 934 363 186 221 0 chr17 45830061 45830174 -49442477 - B1F2 SINE Alu 0 149 12 7 934 204 321 152 39 chr17 45830279 45830483 -49442168 + MIR SINE MIR 26 252 -10 7 934 276 352 0 67 chr17 45830473 45830607 -49442044 + MIRb SINE MIR 29 153 -115 7 934 321 26 0 0 chr17 45831130 45831168 -49441483 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 934 300 203 156 0 chr17 45831452 45831516 -49441135 - ID4_ SINE ID -8 75 2 7 934 339 93 19 0 chr17 45831589 45831643 -49441008 - B3A SINE B2 -143 55 1 7 934 463 271 101 0 chr17 45831666 45831795 -49440856 - ID_B1 SINE B4 -5 219 78 7 934 1118 69 14 0 chr17 45831810 45831954 -49440697 - B1_Mur4 SINE Alu 0 150 5 7 934 241 307 88 10 chr17 45831968 45832070 -49440581 - PB1D10 SINE Alu -7 110 1 7 934 585 76 0 0 chr17 45832748 45832827 -49439824 + (TG)n Simple_repeat Simple_repeat 2 80 0 7 934 357 322 122 0 chr17 45832828 45832943 -49439708 - RSINE1 SINE B4 -10 155 27 7 934 1497 74 5 0 chr17 45832956 45833146 -49439505 + B2_Mm1a SINE B2 2 192 -1 7 934 434 298 119 16 chr17 45833248 45833374 -49439277 - B1F2 SINE Alu -1 148 10 7 934 429 275 28 14 chr17 45833388 45833532 -49439119 - B1F SINE Alu -2 147 2 7 934 263 286 70 26 chr17 45833762 45833877 -49438774 + RSINE1 SINE B4 16 135 -30 7 934 233 255 56 56 chr17 45834275 45834383 -49438268 + PB1D10 SINE Alu 9 116 -1 8 934 390 270 120 0 chr17 45834667 45834767 -49437884 - PB1D10 SINE Alu 0 117 6 8 934 291 327 29 9 chr17 45834827 45834932 -49437719 + RMER12 LTR ERVK 743 849 -473 8 934 978 239 29 0 chr17 45835655 45835860 -49436791 + B3 SINE B2 1 211 -5 8 934 369 0 0 0 chr17 45835861 45835902 -49436749 + (TA)n Simple_repeat Simple_repeat 1 41 0 8 934 447 338 41 22 chr17 45835907 45836153 -49436498 + MIR SINE MIR 6 259 -3 8 934 312 318 51 32 chr17 45836340 45836496 -49436155 + L1ME3 LINE L1 5958 6116 -46 8 934 204 200 0 0 chr17 45837627 45837667 -49434984 + G-rich Low_complexity Low_complexity 1 40 0 8 934 347 290 14 51 chr17 45838756 45838894 -49433757 - B1_Mur1 SINE Alu -5 145 12 8 934 21 0 0 0 chr17 45840072 45840093 -49432558 + AT_rich Low_complexity Low_complexity 1 21 0 8 934 281 164 36 0 chr17 45840101 45840156 -49432495 - B3A SINE B2 -56 142 86 8 934 872 221 64 35 chr17 45840532 45840734 -49431917 + ID_B1 SINE B4 4 211 -13 8 934 373 251 219 25 chr17 45840935 45841131 -49431520 + B4A SINE B4 1 234 -58 8 934 504 48 0 0 chr17 45841212 45841275 -49431376 + (GA)n Simple_repeat Simple_repeat 1 63 0 8 934 1209 55 0 24 chr17 45841308 45841474 -49431177 + B2_Mm2 SINE B2 1 162 -33 8 934 180 0 0 0 chr17 45841474 45841494 -49431157 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 8 934 396 168 30 0 chr17 45841497 45841598 -49431053 + GA-rich Low_complexity Low_complexity 1 104 0 8 934 255 244 38 52 chr17 45841734 45841850 -49430801 + B1F2 SINE Alu 12 117 0 8 934 333 280 169 74 chr17 45842183 45842372 -49430279 + MTE2a LTR MaLR 1 207 -172 8 934 236 288 24 141 chr17 45842352 45842397 -49430254 + YREP_Mm Unknown Unknown 113 143 -1669 8 934 1009 109 0 64 chr17 45842397 45842554 -49430097 - B1_Mus2 SINE Alu 0 147 1 8 934 236 288 24 141 chr17 45842554 45842565 -49430086 + YREP_Mm Unknown Unknown 144 149 -1663 8 934 1158 92 67 0 chr17 45842565 45842729 -49429922 - B2_Mm2 SINE B2 -19 176 2 8 934 236 288 24 141 chr17 45842729 45842877 -49429774 + YREP_Mm Unknown Unknown 150 294 -1518 8 934 655 215 0 7 chr17 45842761 45842897 -49429754 - ID_B1 SINE B4 -6 218 84 8 934 475 222 18 9 chr17 45843283 45843392 -49429259 - PB1D9 SINE Alu -10 110 1 8 934 24 0 0 0 chr17 45843398 45843422 -49429229 + AT_rich Low_complexity Low_complexity 1 24 0 8 934 248 125 15 45 chr17 45843423 45843490 -49429161 + (TA)n Simple_repeat Simple_repeat 2 66 0 8 934 488 272 40 0 chr17 45843492 45843617 -49429034 - ID_B1 SINE B4 -9 215 86 8 934 468 0 0 0 chr17 45844004 45844056 -49428595 + (TATG)n Simple_repeat Simple_repeat 4 55 0 8 934 262 197 94 12 chr17 45844074 45844156 -49428495 - B1_Mur1 SINE Alu -14 135 1 8 934 396 0 0 0 chr17 45844310 45844354 -49428297 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 934 929 124 51 0 chr17 45844709 45844846 -49427805 + B1_Mus1 SINE Alu 4 147 -1 8 934 222 37 0 0 chr17 45844851 45844878 -49427773 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 8 934 694 234 111 5 chr17 45844886 45845075 -49427576 - ID_B1 SINE B4 -10 214 6 8 934 223 300 17 0 chr17 45845278 45845338 -49427313 - MIRb SINE MIR -184 84 24 8 934 480 143 0 0 chr17 45845525 45845609 -49427042 + (CCTG)n Simple_repeat Simple_repeat 2 85 0 8 934 1228 55 0 0 chr17 45845716 45845862 -49426789 + B1_Mus2 SINE Alu 2 147 0 8 934 1519 40 17 0 chr17 45846384 45846560 -49426091 + B2_Mm2 SINE B2 1 179 -16 8 934 800 20 10 0 chr17 45846560 45846658 -49425993 + (GAA)n Simple_repeat Simple_repeat 3 101 0 8 934 461 267 91 8 chr17 45847252 45847373 -49425278 + ID_B1 SINE B4 85 215 -9 8 934 534 193 9 9 chr17 45847823 45847938 -49424713 + B3 SINE B2 2 116 -100 8 934 785 196 0 40 chr17 45847978 45848127 -49424524 + B1_Mur3 SINE Alu 3 145 -4 8 934 201 39 0 0 chr17 45848127 45848153 -49424498 + (CAGA)n Simple_repeat Simple_repeat 4 29 0 8 934 821 169 220 0 chr17 45848491 45848668 -49423983 + B3 SINE B2 1 216 0 8 934 1630 146 54 38 chr17 45849514 45849828 -49422823 - ORR1B1 LTR MaLR 0 394 76 8 934 358 131 13 7 chr17 45849838 45849934 -49422717 - B2_Mm2 SINE B2 -14 181 47 8 934 1231 77 6 0 chr17 45849970 45850139 -49422512 - B2_Mm1t SINE B2 -22 171 2 8 934 441 123 13 27 chr17 45850139 45850213 -49422438 - ORR1B1 LTR MaLR -304 90 18 8 934 435 261 117 0 chr17 45850218 45850329 -49422322 + B1F SINE Alu 19 142 -7 8 934 1117 200 20 5 chr17 45850351 45850547 -49422104 + B3 SINE B2 1 199 -17 8 934 489 34 0 0 chr17 45850576 45850635 -49422016 + (GGA)n Simple_repeat Simple_repeat 2 60 0 8 934 687 226 133 11 chr17 45850851 45851039 -49421612 - ID_B1 SINE B4 -11 213 3 8 934 417 54 0 0 chr17 45851358 45851414 -49421237 + (CA)n Simple_repeat Simple_repeat 1 56 0 8 934 901 145 0 82 chr17 45851638 45851796 -49420855 - B1_Mus1 SINE Alu -1 147 3 8 934 194 0 0 37 chr17 45851808 45851835 -49420816 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 8 934 26 0 0 27 chr17 45852398 45852422 -49420229 + AT_rich Low_complexity Low_complexity 1 24 0 8 934 776 204 208 6 chr17 45852422 45852595 -49420056 - B3 SINE B2 -7 209 2 8 934 26 0 0 27 chr17 45852595 45852607 -49420044 + AT_rich Low_complexity Low_complexity 1 12 0 8 934 684 189 8 0 chr17 45852607 45852729 -49419922 - B1_Mur1 SINE Alu 0 149 27 8 934 673 182 40 0 chr17 45852761 45852887 -49419764 - B1_Mus2 SINE Alu 0 147 17 8 934 399 261 62 42 chr17 45852887 45852904 -49419747 - ID_B1 SINE B4 0 223 78 8 934 577 55 11 11 chr17 45852921 45853012 -49419639 + (TCTA)n Simple_repeat Simple_repeat 2 92 0 8 934 862 164 0 14 chr17 45853014 45853156 -49419495 - B1_Mur4 SINE Alu -6 144 5 8 934 968 245 5 0 chr17 45853207 45853411 -49419240 - B3 SINE B2 -11 205 1 8 934 207 0 0 0 chr17 45853513 45853536 -49419115 + (GA)n Simple_repeat Simple_repeat 1 23 0 8 934 245 375 26 0 chr17 45853563 45853697 -49418954 + MIR3 SINE MIR 40 174 -34 8 934 243 146 0 0 chr17 45854423 45854464 -49418187 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 934 1384 94 5 5 chr17 45854602 45854788 -49417863 + B2_Mm1a SINE B2 1 187 -6 8 934 216 0 0 0 chr17 45854788 45854812 -49417839 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 8 934 311 152 162 12 chr17 45854849 45854929 -49417722 - MTE2a LTR MaLR 0 379 288 8 934 255 178 0 0 chr17 45855037 45855082 -49417569 - MTE2a LTR MaLR -316 63 19 8 934 585 222 6 117 chr17 45855093 45855256 -49417395 + B1_Mur1 SINE Alu 4 148 -1 8 934 410 274 9 28 chr17 45855759 45855852 -49416799 + ID_B1 SINE B4 73 166 -58 8 934 381 95 0 0 chr17 45855852 45855915 -49416736 + (TTAGGG)n Simple_repeat Simple_repeat 6 68 0 8 934 410 274 9 28 chr17 45855915 45855930 -49416721 + ID_B1 SINE B4 167 179 -45 8 934 1702 137 28 3 chr17 45855979 45856264 -49416387 + MTC LTR MaLR 123 414 -7 8 934 180 0 0 0 chr17 45856350 45856370 -49416281 + (TG)n Simple_repeat Simple_repeat 1 20 0 8 934 201 74 0 0 chr17 45856387 45856414 -49416237 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 8 934 825 268 15 5 chr17 45856830 45856910 -49415741 + ID SINE ID 1 82 -142 8 934 297 371 21 7 chr17 45856910 45857054 -49415597 + B1_Mm SINE Alu 1 146 -1 8 934 554 245 55 61 chr17 45857055 45857080 -49415571 + RSINE1 SINE B4 2 26 -139 8 934 2123 139 70 3 chr17 45857080 45857449 -49415202 - ORR1B1 LTR MaLR 0 394 1 8 934 554 245 55 61 chr17 45857449 45857588 -49415063 + RSINE1 SINE B4 27 165 0 8 934 683 311 51 40 chr17 45858314 45858589 -49414062 - B4A SINE B4 -14 278 1 8 934 1217 68 0 0 chr17 45858723 45858871 -49413780 - B1_Mus1 SINE Alu 0 148 1 8 934 569 97 1 1 chr17 45858893 45858983 -49413668 - ORR1A3 LTR MaLR 0 374 249 8 934 280 302 22 22 chr17 45859003 45859172 -49413479 - MIR SINE MIR -68 200 27 8 934 3022 126 94 18 chr17 45859255 45859806 -49412845 + Lx4A LINE L1 6466 7058 0 8 934 347 238 0 36 chr17 45859859 45859942 -49412709 + B3 SINE B2 129 208 -8 8 934 976 62 93 0 chr17 45859954 45860083 -49412568 - B1_Mur4 SINE Alu -9 141 1 8 934 482 158 0 0 chr17 45860402 45860478 -49412173 - B1_Mur3 SINE Alu -73 76 1 8 934 715 242 87 16 chr17 45860563 45860748 -49411903 - B3A SINE B2 0 198 1 8 934 651 214 49 14 chr17 45860776 45860918 -49411733 - B1_Mur1 SINE Alu -1 148 2 8 934 318 287 47 154 chr17 45860918 45860991 -49411660 - B4 SINE B4 -210 82 33 8 934 688 225 13 32 chr17 45862080 45862236 -49410415 + B3A SINE B2 1 153 -45 8 934 743 167 0 11 chr17 45864078 45864260 -49408391 + (CA)n Simple_repeat Simple_repeat 1 180 0 8 934 558 135 0 0 chr17 45864305 45864409 -49408242 + (CA)n Simple_repeat Simple_repeat 2 105 0 8 934 21 0 0 0 chr17 45864467 45864488 -49408163 + AT_rich Low_complexity Low_complexity 1 21 0 8 934 1244 192 9 0 chr17 45864488 45864702 -49407949 - B3 SINE B2 0 216 1 8 934 250 146 188 0 chr17 45864733 45864781 -49407870 - B4A SINE B4 -71 221 165 8 934 420 188 0 48 chr17 45864799 45864883 -49407768 - B1F SINE Alu -24 125 46 8 934 207 204 0 0 chr17 45866032 45866076 -49406575 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 934 988 121 14 0 chr17 45869197 45869337 -49403314 - B1_Mus2 SINE Alu -1 146 5 8 934 23 68 0 0 chr17 45870828 45870872 -49401779 + GC_rich Low_complexity Low_complexity 1 44 0 8 934 28 0 0 0 chr17 45873642 45873670 -49398981 + GC_rich Low_complexity Low_complexity 1 28 0 8 934 209 258 20 10 chr17 45873787 45873885 -49398766 + (CG)n Simple_repeat Simple_repeat 2 100 0 8 935 325 214 160 23 chr17 45875221 45875346 -49397305 - B1F2 SINE Alu 0 149 32 9 935 302 256 43 22 chr17 45875473 45875565 -49397086 - Tigger15a DNA TcMar -431 284 191 9 935 226 296 41 0 chr17 45875658 45875756 -49396895 + L1M2 LINE L1 4735 4836 -1307 9 935 800 252 54 5 chr17 45876105 45876308 -49396343 - ID_B1 SINE B4 -10 214 2 9 935 375 202 0 0 chr17 45876800 45876879 -49395772 + (TA)n Simple_repeat Simple_repeat 2 80 0 9 935 1350 98 38 5 chr17 45876909 45877094 -49395557 - B2_Mm2 SINE B2 -3 192 2 9 935 251 339 66 33 chr17 45877254 45877376 -49395275 + MER5A DNA MER1_type 50 175 -14 9 935 402 231 121 0 chr17 45877498 45877589 -49395062 - PB1D9 SINE Alu -18 102 1 9 935 906 205 54 5 chr17 45877605 45877791 -49394860 + B3 SINE B2 9 203 -13 9 935 231 36 0 0 chr17 45877795 45877823 -49394828 + (CAA)n Simple_repeat Simple_repeat 2 29 0 9 935 765 201 180 22 chr17 45877825 45878003 -49394648 + B3 SINE B2 1 206 -10 9 935 414 0 0 0 chr17 45878015 45878061 -49394590 + (TG)n Simple_repeat Simple_repeat 1 46 0 9 935 522 254 55 8 chr17 45878067 45878194 -49394457 - RSINE1 SINE B4 -23 142 10 9 935 253 269 161 0 chr17 45878470 45878563 -49394088 - MER5A DNA MER1_type -21 168 61 9 935 624 27 0 0 chr17 45878579 45878653 -49393998 + (TC)n Simple_repeat Simple_repeat 1 74 0 9 935 446 125 14 0 chr17 45878657 45878729 -49393922 - B1_Mur4 SINE Alu -65 85 13 9 935 458 268 86 43 chr17 45878947 45878980 -49393671 - B2_Mm2 SINE B2 0 195 167 9 935 387 89 0 0 chr17 45878980 45879036 -49393615 + (TG)n Simple_repeat Simple_repeat 1 56 0 9 935 575 232 115 21 chr17 45879036 45879189 -49393462 - B3A SINE B2 -29 166 1 9 935 869 261 125 17 chr17 45879296 45879573 -49393078 + L1MB3 LINE L1 5792 6100 -83 9 935 225 0 0 0 chr17 45879573 45879598 -49393053 + (TG)n Simple_repeat Simple_repeat 1 25 0 9 935 869 261 125 17 chr17 45879598 45879671 -49392980 + L1MB3 LINE L1 6101 6179 -4 9 935 507 33 0 0 chr17 45880390 45880451 -49392200 + (TG)n Simple_repeat Simple_repeat 1 61 0 9 935 1280 95 6 16 chr17 45880950 45881110 -49391541 + B2_Mm2 SINE B2 1 158 -37 9 935 216 0 0 0 chr17 45881110 45881134 -49391517 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 9 935 1280 95 6 16 chr17 45881134 45881155 -49391496 + B2_Mm2 SINE B2 159 180 -15 9 935 1072 102 0 0 chr17 45881155 45881292 -49391359 + B1_Mus1 SINE Alu 2 138 -10 9 935 216 0 0 0 chr17 45881292 45881316 -49391335 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 9 935 847 201 102 15 chr17 45881325 45881522 -49391129 + B3 SINE B2 3 216 0 9 935 798 193 0 0 chr17 45884496 45884844 -49387807 + (CA)n Simple_repeat Simple_repeat 1 348 0 9 935 221 242 206 21 chr17 45884986 45885083 -49387568 + MIR SINE MIR 73 187 -75 9 935 809 54 0 9 chr17 45886695 45886807 -49385844 + (TC)n Simple_repeat Simple_repeat 2 112 0 9 935 413 312 146 28 chr17 45887804 45888058 -49384593 - MLT1J LTR MaLR -54 458 175 9 935 453 224 76 17 chr17 45888398 45888516 -49384135 - MLT1J LTR MaLR -318 194 70 9 935 1115 156 12 0 chr17 45888573 45888746 -49383905 - B2_Mm2 SINE B2 -19 176 2 9 935 255 288 0 36 chr17 45888903 45888986 -49383665 - MIR SINE MIR -106 156 77 9 935 423 186 0 0 chr17 45889389 45889491 -49383160 + (TG)n Simple_repeat Simple_repeat 2 103 0 9 935 468 0 0 0 chr17 45889491 45889543 -49383108 + (GA)n Simple_repeat Simple_repeat 1 52 0 9 935 474 18 0 0 chr17 45890333 45890388 -49382263 + (TC)n Simple_repeat Simple_repeat 1 55 0 9 935 585 208 0 0 chr17 45890388 45890566 -49382085 + (CA)n Simple_repeat Simple_repeat 2 179 0 9 935 618 192 0 0 chr17 45890600 45890761 -49381890 + (CA)n Simple_repeat Simple_repeat 2 162 0 9 935 240 35 0 0 chr17 45892200 45892229 -49380422 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 9 935 1190 42 14 0 chr17 45892229 45892372 -49380279 - B1_Mm SINE Alu -2 145 1 9 935 182 344 20 30 chr17 45892459 45892558 -49380093 - MIR SINE MIR -147 115 18 9 935 241 330 77 0 chr17 45892668 45892759 -49379892 + PB1D10 SINE Alu 3 100 -17 9 935 354 45 0 0 chr17 45892761 45892805 -49379846 + (CAGA)n Simple_repeat Simple_repeat 1 44 0 9 935 458 134 134 0 chr17 45893168 45893250 -49379401 - B3 SINE B2 -122 94 2 9 935 423 286 126 21 chr17 45893250 45893390 -49379261 + ID_B1 SINE B4 70 224 0 9 935 311 311 104 0 chr17 45893390 45893503 -49379148 - MIR SINE MIR -102 166 38 9 935 252 359 51 57 chr17 45894857 45894939 -49377712 - MER117 DNA MER1_type -20 177 93 9 935 1215 156 56 5 chr17 45894939 45894968 -49377683 + URR1A DNA MER1_type 3 33 -193 9 935 180 0 0 0 chr17 45894968 45894988 -49377663 + (TG)n Simple_repeat Simple_repeat 1 20 0 9 935 1215 156 56 5 chr17 45894988 45895171 -49377480 + URR1A DNA MER1_type 34 225 -1 9 935 252 359 51 57 chr17 45895171 45895265 -49377386 - MER117 DNA MER1_type -105 92 3 9 935 267 333 66 53 chr17 45895288 45895440 -49377211 + LTR88c LTR Genie? 112 265 -597 9 935 191 103 0 25 chr17 45895757 45895797 -49376854 + (CCCCCA)n Simple_repeat Simple_repeat 3 41 0 9 935 232 148 22 59 chr17 45896147 45896283 -49376368 + (TCTA)n Simple_repeat Simple_repeat 2 132 0 9 935 609 194 43 29 chr17 45896341 45896479 -49376172 - B1_Mur4 SINE Alu -1 149 10 9 935 747 59 0 0 chr17 45897117 45897218 -49375433 + B1_Mus1 SINE Alu 28 128 -20 9 935 288 0 0 0 chr17 45897218 45897250 -49375401 + (CCAA)n Simple_repeat Simple_repeat 4 35 0 9 935 553 255 33 20 chr17 45897285 45897437 -49375214 + B4A SINE B4 130 283 -9 9 935 243 259 0 18 chr17 45897453 45897508 -49375143 + (CA)n Simple_repeat Simple_repeat 2 55 0 9 935 194 242 29 88 chr17 45899285 45899353 -49373298 + MIR SINE MIR 84 147 -129 9 935 2855 42 96 0 chr17 45899370 45899724 -49372927 + RLTR10 LTR ERVK 1 388 -2 9 935 270 301 56 37 chr17 45900232 45900339 -49372312 + MIR SINE MIR 109 217 -45 9 935 1326 96 17 0 chr17 45900748 45900926 -49371725 + B2_Mm2 SINE B2 1 181 -14 9 935 373 91 0 0 chr17 45900959 45901019 -49371632 + B2_Mm2 SINE B2 50 109 -107 9 935 198 0 0 0 chr17 45901031 45901053 -49371598 + (TAAAA)n Simple_repeat Simple_repeat 5 26 0 9 935 202 360 19 29 chr17 45901987 45902090 -49370561 - L2 LINE L2 -557 2862 2761 9 935 864 238 40 49 chr17 45902348 45902573 -49370078 - ID_B1 SINE B4 0 224 2 9 935 228 333 14 20 chr17 45903216 45903363 -49369288 + (TATG)n Simple_repeat Simple_repeat 3 148 0 9 935 198 0 0 0 chr17 45903379 45903401 -49369250 + (TG)n Simple_repeat Simple_repeat 2 23 0 9 935 232 271 139 33 chr17 45904340 45904462 -49368189 + MIR SINE MIR 35 169 -93 9 935 207 0 0 0 chr17 45904779 45904802 -49367849 + (C)n Simple_repeat Simple_repeat 1 23 0 9 935 207 0 0 0 chr17 45905318 45905341 -49367310 + (CTG)n Simple_repeat Simple_repeat 3 25 0 9 935 1254 90 0 0 chr17 45905341 45905519 -49367132 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 9 935 231 136 0 48 chr17 45905519 45905581 -49367070 + CT-rich Low_complexity Low_complexity 2 60 0 9 935 1301 84 56 0 chr17 45905584 45905763 -49366888 - B2_Mm2 SINE B2 -6 189 1 9 935 492 257 22 39 chr17 45905908 45906090 -49366561 + CT-rich Low_complexity Low_complexity 2 180 0 9 935 500 264 206 16 chr17 45906375 45906618 -49366033 + MT2A LTR ERVL 245 533 0 9 935 436 276 99 36 chr17 45907673 45907895 -49364756 + B4A SINE B4 7 242 -50 9 935 426 20 0 0 chr17 45908095 45908146 -49364505 + (GA)n Simple_repeat Simple_repeat 1 51 0 9 935 665 24 12 0 chr17 45908148 45908231 -49364420 + (GGA)n Simple_repeat Simple_repeat 3 86 0 9 935 983 110 0 58 chr17 45908269 45908424 -49364227 - B1_Mus1 SINE Alu 0 148 3 9 935 474 18 0 0 chr17 45908525 45908580 -49364071 + (TG)n Simple_repeat Simple_repeat 2 56 0 9 935 333 47 0 0 chr17 45909257 45909300 -49363351 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 935 377 139 69 0 chr17 45911656 45911728 -49360923 + B1_Mur4 SINE Alu 64 140 -10 9 935 504 163 0 0 chr17 45911733 45911862 -49360789 + (CCA)n Simple_repeat Simple_repeat 2 130 0 9 935 274 143 0 0 chr17 45911864 45911874 -49360777 + (TCC)n Simple_repeat Simple_repeat 2 11 0 9 935 1056 98 0 0 chr17 45911874 45912047 -49360604 + (CCA)n Simple_repeat Simple_repeat 2 174 0 9 935 274 143 0 0 chr17 45912047 45912085 -49360566 + (TCC)n Simple_repeat Simple_repeat 3 40 0 9 935 505 250 0 32 chr17 45912121 45912282 -49360369 + B3A SINE B2 72 216 0 9 935 914 205 33 28 chr17 45912513 45912724 -49359927 - B3 SINE B2 0 216 5 9 935 413 292 19 19 chr17 45912945 45913053 -49359598 - MTE2b LTR MaLR -71 308 201 9 935 370 360 38 43 chr17 45913091 45913326 -49359325 - MLT1L LTR MaLR -180 430 197 9 935 270 206 0 0 chr17 45913499 45913562 -49359089 + CT-rich Low_complexity Low_complexity 2 64 0 9 935 334 145 42 28 chr17 45913567 45913638 -49359013 - B1_Mur3 SINE Alu -1 148 77 9 935 252 98 0 0 chr17 45913647 45913688 -49358963 + PB1D9 SINE Alu 40 80 -40 9 935 236 268 0 18 chr17 45914851 45914908 -49357743 - RSINE1 SINE B4 -106 59 4 9 935 996 75 0 0 chr17 45914911 45915045 -49357606 + (TTTC)n Simple_repeat Simple_repeat 4 137 0 9 935 248 253 12 48 chr17 45915089 45915172 -49357479 - B1F1 SINE Alu -2 147 68 9 935 333 324 9 9 chr17 45915173 45915282 -49357369 - B1F SINE Alu -16 133 25 9 935 231 36 0 0 chr17 45915329 45915357 -49357294 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 9 935 348 256 0 13 chr17 45915357 45915436 -49357215 - PB1D10 SINE Alu -24 93 16 9 935 236 394 67 0 chr17 45915579 45915772 -49356879 - L1M5 LINE L1 -528 5596 5391 9 935 984 218 24 10 chr17 45915802 45916010 -49356641 - B3 SINE B2 -5 211 1 9 935 504 0 0 0 chr17 45916055 45916111 -49356540 + (GA)n Simple_repeat Simple_repeat 1 56 0 9 935 495 232 18 18 chr17 45916202 45916316 -49356335 + PB1D10 SINE Alu 2 115 -2 1 935 738 297 107 23 chr17 45916325 45916587 -49356064 + B4 SINE B4 6 289 -3 1 935 241 282 34 34 chr17 45916588 45916676 -49355975 + (CATG)n Simple_repeat Simple_repeat 3 90 0 1 935 918 122 0 0 chr17 45916918 45917098 -49355553 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 935 229 56 56 0 chr17 45917098 45917134 -49355517 + (TGAG)n Simple_repeat Simple_repeat 3 40 0 1 935 750 143 0 0 chr17 45917143 45917410 -49355241 + (TG)n Simple_repeat Simple_repeat 1 267 0 1 935 515 313 28 57 chr17 45917418 45917566 -49355085 - B3 SINE B2 -32 184 41 1 935 1578 57 5 0 chr17 45917566 45917758 -49354893 - B2_Mm1t SINE B2 0 193 1 1 935 515 313 28 57 chr17 45917758 45917785 -49354866 - B3 SINE B2 -176 40 14 1 935 379 279 39 91 chr17 45917832 45917986 -49354665 - L1M5 LINE L1 -1098 5048 4903 9 935 333 251 40 12 chr17 45918530 45918631 -49354020 + PB1D10 SINE Alu 12 112 -5 1 935 429 296 19 44 chr17 45918663 45918822 -49353829 + Lx8 LINE L1 7190 7344 -129 1 935 1202 68 0 7 chr17 45918823 45918971 -49353680 + B1_Mus1 SINE Alu 1 147 -1 1 935 1649 36 5 0 chr17 45919015 45919207 -49353444 + B2_Mm1t SINE B2 1 193 0 1 935 880 197 62 0 chr17 45919256 45919434 -49353217 - B3 SINE B2 0 216 28 1 935 809 138 80 0 chr17 45919685 45919823 -49352828 + B1_Mur3 SINE Alu 1 149 0 1 935 304 243 0 28 chr17 45920710 45920782 -49351869 + BC1_Mm scRNA scRNA 1 70 -82 1 935 1179 208 3 78 chr17 45920723 45921005 -49351646 + B4A SINE B4 14 274 -18 1 935 213 39 0 0 chr17 45921049 45921075 -49351576 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 935 391 277 21 0 chr17 45921933 45922027 -49350624 - MLT1E2 LTR MaLR -499 128 33 1 935 372 333 288 3 chr17 45922139 45922479 -49350172 + LTR33B LTR ERVL 52 488 -15 1 935 492 18 0 0 chr17 45922860 45922917 -49349734 + (TTCC)n Simple_repeat Simple_repeat 4 60 0 1 935 198 0 0 0 chr17 45922917 45922939 -49349712 + (TCC)n Simple_repeat Simple_repeat 2 23 0 1 935 367 356 140 20 chr17 45922939 45923481 -49349170 + L2 LINE L2 2463 3069 -350 1 935 799 209 7 0 chr17 45923823 45923962 -49348689 - B1F2 SINE Alu -9 140 1 1 935 640 141 207 0 chr17 45924091 45924212 -49348439 - B1_Mus2 SINE Alu -1 146 1 1 935 211 360 27 0 chr17 45924219 45924366 -49348285 + MIR SINE MIR 100 250 -12 1 935 249 309 93 7 chr17 45924348 45924498 -49348153 - MIRb SINE MIR -77 191 29 1 935 448 234 0 51 chr17 45924735 45924852 -49347799 + PB1D10 SINE Alu 1 111 -6 1 935 656 178 0 17 chr17 45924861 45924981 -49347670 + B1_Mur1 SINE Alu 3 120 -29 1 935 300 276 56 94 chr17 45924981 45925021 -49347630 + MT2B LTR ERVL 167 320 -281 1 935 432 289 10 0 chr17 45926472 45926576 -49346075 + PB1D10 SINE Alu 3 107 -10 1 935 227 358 8 8 chr17 45927577 45927698 -49344953 + (TGG)n Simple_repeat Simple_repeat 3 123 0 1 935 600 147 95 58 chr17 45928218 45928355 -49344296 - B1_Mur4 SINE Alu 0 150 9 1 935 455 0 18 0 chr17 45928396 45928451 -49344200 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 935 636 250 0 0 chr17 45928451 45928575 -49344076 - RSINE1 SINE B4 -40 125 2 1 935 386 280 30 10 chr17 45929218 45929319 -49343332 - PB1D9 SINE Alu -17 103 1 1 935 285 256 49 37 chr17 45929375 45929456 -49343195 - ID4_ SINE ID 0 83 2 1 935 527 236 35 28 chr17 45929493 45929637 -49343014 + B3A SINE B2 3 147 -51 1 935 282 106 0 0 chr17 45929726 45929773 -49342878 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 935 443 216 6 0 chr17 45929784 45929951 -49342700 + (CA)n Simple_repeat Simple_repeat 2 169 0 1 935 319 232 9 92 chr17 45929952 45930061 -49342590 + HAL1-3A_ME LINE L1 1975 2074 -784 1 935 381 347 8 0 chr17 45930384 45930508 -49342143 - B1F2 SINE Alu -14 135 11 1 935 939 220 65 0 chr17 45930548 45930734 -49341917 - B3 SINE B2 -18 198 1 1 935 233 323 58 84 chr17 45930928 45931202 -49341449 + L1MEc LINE L1 937 1203 -5212 1 935 468 297 46 90 chr17 45931377 45931718 -49340933 + L1MEc LINE L1 2103 2422 -3917 1 935 875 200 25 0 chr17 45931718 45931878 -49340773 - RSINE1 SINE B4 0 165 2 1 935 368 330 50 104 chr17 45931878 45932017 -49340634 + L1MEc LINE L1 2423 2557 -3782 1 935 720 209 113 20 chr17 45932208 45932403 -49340248 + B3 SINE B2 1 213 -3 1 935 267 103 0 0 chr17 45932403 45932442 -49340209 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 935 815 131 325 18 chr17 45932716 45932879 -49339772 - B3 SINE B2 0 216 4 1 935 313 323 83 0 chr17 45934911 45935044 -49337607 - B1F1 SINE Alu -5 144 1 1 935 334 250 48 48 chr17 45935056 45935161 -49337490 - PB1D9 SINE Alu 0 120 16 1 935 233 282 108 39 chr17 45935422 45935551 -49337100 + MIR3 SINE MIR 60 197 -11 1 935 201 279 0 0 chr17 45936326 45936394 -49336257 + (TTCA)n Simple_repeat Simple_repeat 3 70 0 1 935 888 28 0 0 chr17 45936394 45936501 -49336150 + (CA)n Simple_repeat Simple_repeat 1 107 0 1 935 528 250 48 60 chr17 45936543 45936624 -49336027 + ID SINE ID 6 84 -140 1 935 314 262 93 0 chr17 45936624 45936731 -49335920 + PB1D10 SINE Alu 1 117 0 1 935 180 214 107 0 chr17 45936778 45936834 -49335817 - L3b LINE CR1 -121 361 300 1 935 696 194 37 7 chr17 45936853 45936988 -49335663 - B1_Mur4 SINE Alu -3 147 9 1 935 380 277 74 92 chr17 45936988 45937016 -49335635 - B4 SINE B4 -70 222 63 1 935 913 236 44 5 chr17 45937024 45937228 -49335423 - B3 SINE B2 0 216 5 1 935 1082 199 9 24 chr17 45937251 45937462 -49335189 - B3 SINE B2 -8 208 1 1 935 1229 34 0 20 chr17 45938516 45938666 -49333985 - B1_Mus1 SINE Alu 0 148 2 1 935 227 214 14 0 chr17 45938817 45938887 -49333764 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 935 180 111 0 0 chr17 45939771 45939798 -49332853 + (TTA)n Simple_repeat Simple_repeat 1 27 0 1 935 633 271 76 29 chr17 45939839 45940010 -49332641 - B3A SINE B2 -19 179 1 1 935 194 128 0 25 chr17 45940010 45940050 -49332601 + CT-rich Low_complexity Low_complexity 2 40 0 1 935 262 289 56 20 chr17 45940050 45940149 -49332502 - B1F SINE Alu -15 134 13 1 935 306 289 57 8 chr17 45940303 45940425 -49332226 - MIRc SINE MIR -122 146 19 1 935 441 0 0 0 chr17 45940629 45940678 -49331973 + (GA)n Simple_repeat Simple_repeat 1 49 0 1 935 196 170 62 21 chr17 45941366 45941414 -49331237 - L2c LINE L2 -70 3317 3268 1 935 558 103 0 0 chr17 45943067 45943154 -49329497 + (CA)n Simple_repeat Simple_repeat 2 88 0 1 935 357 271 215 0 chr17 45943209 45943353 -49329298 + MER53 DNA hAT 13 187 -6 1 935 198 321 0 0 chr17 45943489 45943542 -49329109 + L2c LINE L2 3267 3319 -68 1 935 222 37 0 0 chr17 45944425 45944452 -49328199 + (CCCG)n Simple_repeat Simple_repeat 1 27 0 1 935 435 38 0 0 chr17 45945915 45945968 -49326683 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 935 282 56 0 0 chr17 45946028 45946064 -49326587 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 935 271 216 27 0 chr17 45946124 45946198 -49326453 + (CA)n Simple_repeat Simple_repeat 2 77 0 1 935 899 266 106 78 chr17 45946237 45946632 -49326019 + MLT1C LTR MaLR 50 455 -12 1 935 745 335 63 46 chr17 45946740 45947106 -49325545 - MTEa LTR MaLR -7 372 1 1 935 247 234 0 0 chr17 45947177 45947241 -49325410 + Lx2B LINE L1 5730 5793 -1207 1 935 353 243 135 10 chr17 45947589 45947693 -49324958 + RSINE1 SINE B4 6 122 -43 1 935 21 0 0 0 chr17 45947737 45947758 -49324893 + AT_rich Low_complexity Low_complexity 1 21 0 1 935 893 224 41 27 chr17 45947871 45948091 -49324560 + ID_B1 SINE B4 2 224 0 1 935 244 318 41 43 chr17 45949854 45950014 -49322637 + MIR SINE MIR 17 175 -93 1 935 1277 163 0 36 chr17 45950504 45950727 -49321924 - B3 SINE B2 0 216 2 1 935 619 159 0 0 chr17 45950739 45950846 -49321805 - B1_Mur1 SINE Alu -2 147 41 1 935 196 271 83 0 chr17 45950890 45950938 -49321713 + MIR SINE MIR 65 116 -92 1 935 210 315 60 43 chr17 45952435 45952551 -49320100 - MIRb SINE MIR -37 231 114 1 935 362 21 21 0 chr17 45954047 45954094 -49318557 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 935 1110 257 54 7 chr17 45954223 45954501 -49318150 - B4A SINE B4 0 292 2 1 935 278 258 149 15 chr17 45955030 45955164 -49317487 + B4A SINE B4 2 153 -139 1 935 254 186 94 25 chr17 45955166 45955326 -49317325 + (CAGG)n Simple_repeat Simple_repeat 2 172 0 1 935 450 157 12 0 chr17 45955339 45955422 -49317229 + B4A SINE B4 124 207 -85 1 935 213 300 32 53 chr17 45955340 45955435 -49317216 + B1F2 SINE Alu 40 132 -17 1 935 450 0 0 0 chr17 45955454 45955504 -49317147 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 935 804 199 57 36 chr17 45956544 45956699 -49315952 + B3A SINE B2 2 166 -32 1 935 324 0 0 0 chr17 45956699 45956735 -49315916 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 935 804 199 57 36 chr17 45956735 45956772 -49315879 + B3A SINE B2 167 197 -1 1 935 817 286 90 54 chr17 45957028 45957506 -49315145 - RMER13A LTR ERVK -51 576 30 1 935 488 179 105 0 chr17 45957561 45957656 -49314995 + Lx9 LINE L1 5810 5914 -1730 1 935 189 0 0 0 chr17 45957741 45957762 -49314889 + (CAA)n Simple_repeat Simple_repeat 1 21 0 1 935 206 0 69 0 chr17 45957806 45957835 -49314816 + (CAAT)n Simple_repeat Simple_repeat 1 31 0 1 935 585 162 295 22 chr17 45957835 45958074 -49314577 + Lx9 LINE L1 7042 7345 -299 1 935 360 66 16 16 chr17 45958083 45958145 -49314506 + Lx9 LINE L1 7582 7643 -1 1 935 1275 222 127 15 chr17 45958252 45958582 -49314069 - ORR1D2 LTR MaLR 0 370 4 1 935 468 286 142 31 chr17 45959727 45960166 -49312485 + L2a LINE L2 2759 3248 -139 1 935 1397 173 0 13 chr17 45960282 45960511 -49312140 + URR1A DNA MER1_type 1 226 0 1 935 510 282 52 141 chr17 45960567 45960872 -49311779 + MLT1B LTR MaLR 61 338 -52 1 935 279 0 0 0 chr17 45960966 45960997 -49311654 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 935 773 187 0 67 chr17 45961184 45961333 -49311318 + B1F2 SINE Alu 3 141 -8 1 935 486 306 72 0 chr17 45961707 45961887 -49310764 + MER2 DNA MER2_type 104 296 -49 1 935 323 245 9 73 chr17 45962858 45962968 -49309683 - ID_B1 SINE B4 -8 216 114 1 935 428 293 43 87 chr17 45963025 45963324 -49309327 - B4A SINE B4 -2 290 5 1 935 301 333 64 11 chr17 45963326 45963420 -49309231 - ID_B1 SINE B4 -123 101 3 1 935 1979 147 34 48 chr17 45964151 45964190 -49308461 + ORR1D1 LTR MaLR 1 37 -337 1 935 2093 162 20 3 chr17 45964190 45964543 -49308108 + RLTR15 LTR ERVK 1 359 0 1 935 1979 147 34 48 chr17 45964543 45964882 -49307769 + ORR1D1 LTR MaLR 38 374 0 1 935 418 274 10 0 chr17 45964882 45964980 -49307671 - PB1D9 SINE Alu -16 104 6 1 935 258 244 32 95 chr17 45964901 45964996 -49307655 - MT2B LTR ERVL -361 240 152 1 935 229 361 22 29 chr17 45965934 45966071 -49306580 + L1M5 LINE L1 5692 5827 -346 1 935 506 209 9 9 chr17 45966630 45966736 -49305915 - ID_B1 SINE B4 -3 221 116 1 935 973 274 117 10 chr17 45966823 45967114 -49305537 - MER2 DNA MER2_type -1 344 23 1 935 274 296 154 29 chr17 45967099 45967227 -49305424 - MLT1E1A LTR MaLR -58 622 478 1 935 1285 117 5 0 chr17 45967227 45967424 -49305227 - ORR1A4 LTR MaLR 0 329 132 1 935 874 175 12 12 chr17 45967443 45967605 -49305046 - B3A SINE B2 -34 164 3 1 935 306 200 17 0 chr17 45967605 45967665 -49304986 + ORR1D2 LTR MaLR 303 363 -7 1 935 1965 114 112 66 chr17 45967907 45968255 -49304396 + ORR1B2 LTR MaLR 1 364 -3 1 935 462 334 56 21 chr17 45968335 45968697 -49303954 + L1ME1 LINE L1 4438 4816 -1330 1 935 317 364 106 16 chr17 45968780 45968857 -49303794 + RSINE1 SINE B4 11 85 -80 1 935 357 24 0 0 chr17 45968857 45968899 -49303752 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 935 317 364 106 16 chr17 45968899 45968944 -49303707 + RSINE1 SINE B4 86 143 -22 1 935 325 192 27 0 chr17 45968966 45969054 -49303597 + ORR1D1 LTR MaLR 1 91 -279 1 935 493 227 0 0 chr17 45969056 45969153 -49303498 - B3 SINE B2 -119 97 1 1 935 270 0 0 0 chr17 45969162 45969192 -49303459 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1 935 731 232 161 5 chr17 45969193 45969379 -49303272 - ID_B1 SINE B4 -9 215 1 1 935 425 273 86 53 chr17 45969415 45969566 -49303085 - RSINE1 SINE B4 -8 157 2 1 935 1010 290 11 11 chr17 45969600 45969886 -49302765 + B4 SINE B4 1 286 -6 1 935 343 240 40 0 chr17 45970432 45970507 -49302144 - ID4 SINE ID 0 83 6 1 935 276 86 373 28 chr17 45970533 45970640 -49302011 - B2_Mm2 SINE B2 -5 190 47 1 935 1161 88 6 23 chr17 45970695 45970869 -49301782 - B2_Mm1t SINE B2 -22 171 1 1 935 552 248 35 7 chr17 45970878 45971020 -49301631 - B1F SINE Alu -2 147 2 1 935 817 248 65 10 chr17 45971036 45971236 -49301415 - ID_B1 SINE B4 -10 214 4 1 935 1413 287 49 32 chr17 45971522 45972029 -49300622 + L1ME1 LINE L1 5642 6157 -22 1 935 1000 203 4 120 chr17 45972056 45972254 -49300397 - B3 SINE B2 0 216 34 1 935 1277 98 0 72 chr17 45972254 45972462 -49300189 - B2_Mm2 SINE B2 0 195 3 1 935 1000 203 4 120 chr17 45972462 45972504 -49300147 - B3 SINE B2 -183 33 4 1 935 242 304 15 88 chr17 45972548 45972685 -49299966 - B1_Mus1 SINE Alu -21 127 1 1 935 329 279 203 8 chr17 45972566 45972689 -49299962 - ID_B1 SINE B4 0 224 78 1 935 261 180 0 0 chr17 45972791 45972841 -49299810 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 935 1033 253 71 43 chr17 45972844 45973125 -49299526 - B4A SINE B4 -1 291 3 1 935 1959 249 77 138 chr17 45975158 45975871 -49296780 + RCHARR1 DNA MER1_type 29 687 -287 1 935 865 215 0 71 chr17 45975871 45976081 -49296570 + B3A SINE B2 1 195 -3 1 935 1959 249 77 138 chr17 45976081 45976304 -49296347 + RCHARR1 DNA MER1_type 688 908 -66 1 935 599 296 9 146 chr17 45976364 45976685 -49295966 - B4A SINE B4 -14 278 2 1 935 387 0 0 0 chr17 45977061 45977104 -49295547 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 935 223 232 268 0 chr17 45977731 45977813 -49294838 + MIR SINE MIR 93 196 -66 1 935 211 215 15 15 chr17 45978756 45978822 -49293829 + CT-rich Low_complexity Low_complexity 1 66 0 1 935 881 137 0 0 chr17 45978830 45978961 -49293690 - B1_Mur4 SINE Alu -11 139 9 1 935 587 193 130 7 chr17 45978960 45979106 -49293545 - MTC LTR MaLR -239 182 19 1 935 1057 177 41 45 chr17 45979117 45979360 -49293291 + ORR1D1 LTR MaLR 126 367 -7 1 935 1229 252 58 15 chr17 45979455 45979797 -49292854 + Lx8 LINE L1 6418 6774 -699 1 935 808 180 0 21 chr17 45979858 45979995 -49292656 + B1_Mus1 SINE Alu 2 136 -12 1 935 192 77 0 0 chr17 45979995 45980021 -49292630 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 1 935 2303 120 82 3 chr17 45980025 45980401 -49292250 - MTC LTR MaLR -7 414 9 1 935 732 276 15 5 chr17 45980406 45980522 -49292129 + Lx8 LINE L1 6840 6956 -517 1 935 3559 20 2 2 chr17 45980522 45980918 -49291733 + MTA_Mm LTR MaLR 1 396 0 1 935 732 276 15 5 chr17 45980918 45980998 -49291653 + Lx8 LINE L1 6957 7037 -436 1 935 845 202 32 5 chr17 45981000 45981189 -49291462 + B3 SINE B2 8 201 -15 1 935 487 224 52 0 chr17 45981193 45981309 -49291342 + RCHARR1 DNA MER1_type 488 609 -365 1 935 403 260 88 24 chr17 45981320 45981525 -49291126 - L1M4c LINE L1 -3195 3811 3594 1 935 306 261 210 24 chr17 45981830 45982067 -49290584 - L1M4c LINE L1 -4874 2134 1887 1 935 2233 150 8 3 chr17 45982088 45982463 -49290188 + MTC LTR MaLR 4 380 -41 1 935 1222 48 0 0 chr17 45982522 45982667 -49289984 - B1_Mus1 SINE Alu -1 147 3 1 935 841 161 286 0 chr17 45982703 45982871 -49289780 + B3 SINE B2 1 216 0 1 935 559 225 113 0 chr17 45982882 45983024 -49289627 - B3 SINE B2 -2 214 57 1 935 510 224 47 23 chr17 45983106 45983234 -49289417 + B1F1 SINE Alu 5 135 -14 1 935 741 53 0 0 chr17 45983234 45983328 -49289323 + (CAAGA)n Simple_repeat Simple_repeat 5 98 0 1 935 270 254 104 30 chr17 45983381 45983515 -49289136 - L1M4c LINE L1 -5867 1467 1324 1 935 549 184 99 58 chr17 45983711 45983832 -49288819 - RSINE1 SINE B4 -29 136 11 1 935 261 0 0 0 chr17 45983853 45983882 -49288769 + (TATG)n Simple_repeat Simple_repeat 2 30 0 1 935 187 349 0 43 chr17 45984866 45984935 -49287716 + MIRm SINE MIR 116 181 -95 1 935 212 125 0 48 chr17 45986097 45986139 -49286512 + MIRc SINE MIR 117 156 -112 1 935 765 107 0 0 chr17 45986322 45986462 -49286189 + (TC)n Simple_repeat Simple_repeat 2 141 0 1 935 468 0 0 0 chr17 45986463 45986515 -49286136 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 935 245 298 35 35 chr17 45986738 45986825 -49285826 - L2a LINE L2 -87 3339 3253 1 935 216 282 0 175 chr17 45986865 45986968 -49285683 + BC1_Mm scRNA scRNA 21 105 -47 1 935 261 350 107 19 chr17 45986970 45987232 -49285419 - L2a LINE L2 -209 3217 2933 1 935 234 91 0 0 chr17 45987556 45987589 -49285062 + (GGAA)n Simple_repeat Simple_repeat 3 35 0 1 935 459 92 0 0 chr17 45989293 45989358 -49283293 + (GA)n Simple_repeat Simple_repeat 1 65 0 1 935 264 351 22 22 chr17 45989694 45989828 -49282823 + L3 LINE CR1 3502 3635 -854 1 935 287 200 0 0 chr17 45990653 45990708 -49281943 - B4A SINE B4 -237 55 1 1 935 428 302 0 16 chr17 45990925 45991053 -49281598 + B1F SINE Alu 9 134 -15 1 935 565 353 66 19 chr17 45991292 45991610 -49281041 + L1MA5 LINE L1 5530 5862 -435 1 935 259 203 0 26 chr17 45991740 45991816 -49280835 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 935 375 121 0 0 chr17 45991816 45991874 -49280777 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 935 303 224 0 0 chr17 45991960 45992036 -49280615 + (TG)n Simple_repeat Simple_repeat 1 76 0 1 935 731 337 28 14 chr17 45992047 45992330 -49280321 - B4A SINE B4 -3 289 3 1 935 548 354 28 62 chr17 45992389 45992714 -49279937 + MLT1H1 LTR MaLR 10 323 -232 1 935 266 349 36 9 chr17 45992695 45992805 -49279846 + MLT1H1 LTR MaLR 443 555 -5 1 935 243 0 0 0 chr17 45993261 45993288 -49279363 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 935 405 0 0 0 chr17 45993425 45993470 -49279181 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 935 589 309 123 0 chr17 45993499 45993735 -49278916 - B4A SINE B4 -27 265 1 1 935 825 254 227 16 chr17 45993917 45994077 -49278574 + MTEb LTR MaLR 4 197 -182 1 935 612 0 0 0 chr17 45994077 45994145 -49278506 + (TC)n Simple_repeat Simple_repeat 1 68 0 1 935 825 254 227 16 chr17 45994145 45994288 -49278363 + MTEb LTR MaLR 198 371 -8 1 935 243 421 6 0 chr17 45994460 45994624 -49278027 + (TG)n Simple_repeat Simple_repeat 2 166 0 1 935 326 295 0 13 chr17 45994638 45994717 -49277934 - B4 SINE B4 0 292 215 1 935 246 62 0 0 chr17 45994743 45994775 -49277876 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 935 677 323 41 48 chr17 45994805 45995098 -49277553 - B4A SINE B4 -1 291 1 1 935 676 156 0 0 chr17 45995114 45995223 -49277428 - B3 SINE B2 -102 114 6 1 935 324 211 0 27 chr17 45995277 45995350 -49277301 - B4A SINE B4 -218 74 4 1 935 1268 248 88 20 chr17 45995543 45995599 -49277052 + MTE2a LTR MaLR 1 65 -314 1 935 2198 128 3 63 chr17 45995599 45995949 -49276702 + ORR1A4 LTR MaLR 1 329 0 1 935 1268 248 88 20 chr17 45995949 45996192 -49276459 + MTE2a LTR MaLR 66 312 -67 1 935 333 0 0 0 chr17 45996192 45996229 -49276422 + (TTCC)n Simple_repeat Simple_repeat 3 39 0 1 935 1268 248 88 20 chr17 45996229 45996282 -49276369 + MTE2a LTR MaLR 313 377 -2 1 935 236 245 0 20 chr17 45998724 45998774 -49273877 + B4A SINE B4 52 100 -192 1 935 774 166 11 6 chr17 45998802 45998978 -49273673 + (TG)n Simple_repeat Simple_repeat 2 178 0 1 935 506 285 12 37 chr17 45999003 45999167 -49273484 + B4A SINE B4 133 292 0 1 935 438 36 0 0 chr17 45999195 45999251 -49273400 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 935 359 41 0 20 chr17 45999513 45999563 -49273088 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 935 213 94 0 0 chr17 46000748 46000780 -49271871 + (CTG)n Simple_repeat Simple_repeat 1 32 0 1 935 488 321 98 0 chr17 46001029 46001244 -49271407 + MIR SINE MIR 8 243 -19 2 935 336 300 40 13 chr17 46001886 46002038 -49270613 + CT-rich Low_complexity Low_complexity 3 158 0 3 935 181 313 60 0 chr17 46004435 46004502 -49268149 + L2c LINE L2 3274 3344 -43 4 935 207 0 0 0 chr17 46004963 46004986 -49267665 + (T)n Simple_repeat Simple_repeat 1 23 0 5 935 195 200 22 22 chr17 46005034 46005080 -49267571 + MIRc SINE MIR 112 157 -111 6 935 193 380 40 24 chr17 46005627 46005751 -49266900 - MIRc SINE MIR -104 164 39 7 935 351 65 0 0 chr17 46005779 46005825 -49266826 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 8 936 402 21 0 0 chr17 46006420 46006467 -49266184 + (CA)n Simple_repeat Simple_repeat 2 48 0 9 936 901 309 47 11 chr17 46006871 46007149 -49265502 + B4 SINE B4 3 290 -2 1 936 21 0 0 0 chr17 46007175 46007196 -49265455 + GC_rich Low_complexity Low_complexity 1 21 0 1 936 220 178 0 0 chr17 46007822 46007867 -49264784 + RSINE1 SINE B4 3 47 -118 1 936 231 345 52 87 chr17 46008699 46008928 -49263723 - L2b LINE L2 -232 3155 2935 1 936 201 171 0 0 chr17 46008911 46008946 -49263705 + L3 LINE CR1 789 823 -3666 1 936 351 0 0 0 chr17 46010104 46010143 -49262508 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 936 323 275 25 0 chr17 46011404 46011484 -49261167 + RSINE1 SINE B4 47 128 -37 1 936 477 284 147 5 chr17 46011684 46011875 -49260776 + ID_B1 SINE B4 3 220 -4 1 936 315 200 0 136 chr17 46011951 46012061 -49260590 - MLT1A1 LTR MaLR 0 408 314 1 936 197 312 0 49 chr17 46012266 46012347 -49260304 - MIRb SINE MIR -80 188 112 1 936 240 35 0 0 chr17 46012739 46012768 -49259883 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 936 252 0 0 0 chr17 46013360 46013388 -49259263 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 936 204 307 87 9 chr17 46015231 46015346 -49257305 - MIRb SINE MIR -69 199 76 2 936 797 250 5 15 chr17 46015482 46015681 -49256970 - B3A SINE B2 0 198 2 2 936 198 67 67 0 chr17 46015843 46015888 -49256763 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 2 936 725 179 48 41 chr17 46015889 46016035 -49256616 - B1_Mur1 SINE Alu -2 147 1 2 936 498 33 0 0 chr17 46016073 46016133 -49256518 + (TTTC)n Simple_repeat Simple_repeat 1 60 0 2 936 529 280 34 103 chr17 46016134 46016309 -49256342 - RSINE1 SINE B4 0 165 3 2 936 335 236 33 11 chr17 46017160 46017250 -49255401 + MER3 DNA MER1_type 9 100 -109 2 936 1209 130 130 0 chr17 46018246 46018446 -49254205 - URR1A DNA MER1_type 0 226 1 2 936 400 262 0 0 chr17 46018933 46019017 -49253634 - MTEa LTR MaLR -2 377 294 2 936 432 0 0 0 chr17 46019029 46019077 -49253574 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 936 404 294 46 53 chr17 46019115 46019354 -49253297 - B4A SINE B4 -16 276 53 3 936 719 272 144 23 chr17 46019385 46019464 -49253187 - MTEa LTR MaLR -84 295 210 2 936 477 0 0 0 chr17 46019464 46019517 -49253134 + (GA)n Simple_repeat Simple_repeat 2 54 0 3 936 719 272 144 23 chr17 46019517 46019700 -49252951 - MTEa LTR MaLR -170 209 2 2 936 906 78 0 48 chr17 46020660 46020849 -49251802 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 936 839 250 73 73 chr17 46020923 46021212 -49251439 + MTEa LTR MaLR 13 301 -78 3 936 684 114 39 39 chr17 46021729 46021884 -49250767 + RMER17B LTR ERVK 306 460 -498 3 936 339 113 0 0 chr17 46021884 46021946 -49250705 + (GA)n Simple_repeat Simple_repeat 1 62 0 3 936 1095 238 5 0 chr17 46022002 46022212 -49250439 - ID_B1 SINE B4 -12 212 2 3 936 182 156 22 0 chr17 46022317 46022362 -49250289 + GA-rich Low_complexity Low_complexity 1 46 0 3 936 513 298 104 12 chr17 46024815 46024978 -49247673 - B3A SINE B2 -3 195 18 3 936 375 321 49 30 chr17 46025299 46025463 -49247188 + MIRc SINE MIR 99 265 -3 4 936 277 276 202 45 chr17 46026213 46026395 -49246256 - MIR SINE MIR -41 221 15 4 936 416 319 89 12 chr17 46026852 46027020 -49245631 + MIR SINE MIR 32 212 -50 4 936 293 281 262 20 chr17 46027026 46027175 -49245476 + MTC LTR MaLR 19 203 -218 4 936 332 314 124 0 chr17 46027163 46027268 -49245383 + B4 SINE B4 77 194 -98 4 936 585 159 75 0 chr17 46027179 46027286 -49245365 + B1_Mur4 SINE Alu 10 124 -26 4 936 560 210 12 12 chr17 46027286 46027450 -49245201 + GA-rich Low_complexity Low_complexity 2 165 0 4 936 364 342 106 30 chr17 46027507 46027706 -49244945 + MTC LTR MaLR 194 407 -14 4 936 660 262 131 45 chr17 46028273 46028517 -49244134 - MTEb LTR MaLR 0 379 115 4 936 1272 176 8 51 chr17 46028551 46028785 -49243866 + URR1B DNA MER1_type 2 225 0 4 936 181 373 0 0 chr17 46029063 46029122 -49243529 - L2a LINE L2 -1 3425 3367 4 936 238 262 15 15 chr17 46029161 46029227 -49243424 + B1F SINE Alu 3 68 -81 5 936 734 297 86 33 chr17 46029216 46029415 -49243236 + B4A SINE B4 32 248 -44 5 936 1999 209 42 17 chr17 46029415 46029824 -49242827 - MTD LTR MaLR 0 419 1 5 936 734 297 86 33 chr17 46029824 46029868 -49242783 + B4A SINE B4 249 288 -4 5 936 551 40 14 0 chr17 46029879 46029953 -49242698 + (CA)n Simple_repeat Simple_repeat 1 75 0 5 936 262 235 29 14 chr17 46030207 46030276 -49242375 - MIR SINE MIR -161 101 32 5 936 393 259 89 0 chr17 46030891 46031003 -49241648 + B4A SINE B4 2 123 -169 5 936 256 202 47 71 chr17 46031110 46031195 -49241456 + RSINE1 SINE B4 73 155 -10 5 936 489 239 12 61 chr17 46031695 46031862 -49240789 + B4A SINE B4 133 292 0 5 936 258 184 0 0 chr17 46032522 46032571 -49240080 + B4 SINE B4 92 140 -152 5 936 231 354 35 0 chr17 46032571 46032635 -49240016 + PB1 SINE Alu 7 123 -4 5 936 405 0 0 0 chr17 46032769 46032814 -49239837 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 936 214 375 9 9 chr17 46032852 46032965 -49239686 - L2a LINE L2 -12 3414 3302 6 936 552 311 5 32 chr17 46034907 46035093 -49237558 + MIRb SINE MIR 88 268 0 6 936 629 304 63 106 chr17 46035577 46035886 -49236765 - MLT1H2 LTR MaLR 0 489 195 6 936 988 276 9 0 chr17 46035886 46036100 -49236551 + ID_B1 SINE B4 4 219 -5 6 936 629 304 63 106 chr17 46036100 46036283 -49236368 - MLT1H2 LTR MaLR -295 194 18 6 936 370 344 42 64 chr17 46036385 46036621 -49236030 - MLT1J LTR MaLR -35 477 247 6 936 267 303 28 28 chr17 46037751 46037901 -49234750 + B4 SINE B4 1 150 -142 6 936 396 193 0 46 chr17 46037906 46037993 -49234658 + RSINE1 SINE B4 83 165 0 6 936 636 279 32 0 chr17 46038123 46038265 -49234386 + RSINE1 SINE B4 3 149 -16 6 936 405 58 0 0 chr17 46038265 46038317 -49234334 + (CATA)n Simple_repeat Simple_repeat 3 54 0 6 936 636 279 32 0 chr17 46038317 46038332 -49234319 + RSINE1 SINE B4 150 164 -1 6 936 300 53 0 0 chr17 46038368 46038406 -49234245 + (CGTG)n Simple_repeat Simple_repeat 1 38 0 6 936 666 237 72 7 chr17 46038406 46038559 -49234092 - RSINE1 SINE B4 0 165 3 7 936 1098 64 35 0 chr17 46038775 46038916 -49233735 + B1_Mm SINE Alu 2 147 0 7 936 214 185 46 0 chr17 46038918 46038983 -49233668 + (CAAA)n Simple_repeat Simple_repeat 1 68 0 7 936 315 294 59 26 chr17 46039029 46039193 -49233458 + MIRc SINE MIR 23 186 -76 7 936 211 11 0 163 chr17 46039345 46039554 -49233097 + (CAGGG)n Simple_repeat Simple_repeat 4 178 0 7 936 361 250 20 10 chr17 46039589 46039690 -49232961 + ID_B1 SINE B4 122 223 -1 7 936 347 329 104 4 chr17 46039902 46040143 -49232508 + L1ME4a LINE L1 5641 5905 -219 7 936 280 350 55 20 chr17 46040820 46040966 -49231685 + MIR3 SINE MIR 17 167 -41 7 936 216 158 0 0 chr17 46040982 46041020 -49231631 + T-rich Low_complexity Low_complexity 1 38 0 7 936 497 277 21 28 chr17 46041026 46041167 -49231484 - ID_B1 SINE B4 -69 155 16 7 936 396 0 0 0 chr17 46041650 46041694 -49230957 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 936 1100 237 13 13 chr17 46041730 46041969 -49230682 - B4A SINE B4 -3 289 51 8 936 328 310 157 26 chr17 46042379 46042647 -49230004 + Charlie19a DNA Charlie 10 312 -74 8 936 521 311 48 0 chr17 46042950 46043117 -49229534 + B3A SINE B2 2 176 -22 8 936 360 43 0 0 chr17 46043161 46043207 -49229444 + (CA)n Simple_repeat Simple_repeat 1 46 0 8 936 371 311 73 7 chr17 46043229 46043245 -49229406 + B4 SINE B4 70 209 -78 8 936 688 174 9 0 chr17 46043245 46043360 -49229291 + B1_Mur3 SINE Alu 2 117 -32 8 936 1104 273 39 26 chr17 46043390 46043702 -49228949 + MTE2b LTR MaLR 1 316 -63 8 936 921 95 13 39 chr17 46045114 46045267 -49227384 - B1_Mur3 SINE Alu 0 149 1 8 936 543 303 63 5 chr17 46046194 46046383 -49226268 + ORSL DNA Tip100 14 213 -62 8 936 254 311 42 26 chr17 46048672 46048814 -49223837 + MIRm SINE MIR 43 188 -80 9 936 427 256 76 34 chr17 46048869 46049054 -49223597 - MIR SINE MIR -68 194 8 9 936 362 396 12 0 chr17 46049605 46049769 -49222882 - MIR SINE MIR -16 246 81 9 936 1139 117 0 6 chr17 46049792 46049973 -49222678 + (GAA)n Simple_repeat Simple_repeat 1 180 0 9 936 181 269 118 15 chr17 46051059 46051127 -49221524 + L2a LINE L2 3352 3426 0 9 936 209 279 0 0 chr17 46051611 46051654 -49220997 + (CA)n Simple_repeat Simple_repeat 1 43 0 9 936 362 325 86 16 chr17 46051887 46052015 -49220636 + ID_B1 SINE B4 88 224 0 9 936 892 97 21 7 chr17 46052156 46052301 -49220350 + (GGGAGA)n Simple_repeat Simple_repeat 5 151 0 9 936 1221 68 0 0 chr17 46052328 46052476 -49220175 - B1_Mus1 SINE Alu 0 148 1 9 936 277 289 0 46 chr17 46052574 46052661 -49219990 - MLT1A1 LTR MaLR -312 96 14 9 936 612 278 87 70 chr17 46052887 46053185 -49219466 + MTEa LTR MaLR 64 366 -13 1 936 190 246 17 17 chr17 46054126 46054184 -49218467 + L2b LINE L2 3144 3201 -174 1 936 320 320 20 0 chr17 46055297 46055397 -49217254 - HAL1-2a_MD LINE L1 -578 2446 2345 1 936 321 120 0 0 chr17 46055428 46055478 -49217173 - B1_Mur4 SINE Alu -92 58 9 1 936 635 302 29 29 chr17 46055606 46055814 -49216837 - ID_B1 SINE B4 -12 212 5 1 936 460 283 0 84 chr17 46055842 46055973 -49216678 - PB1D7 SINE Alu 0 120 1 1 936 507 265 110 20 chr17 46057500 46057700 -49214951 + ID_B1 SINE B4 1 218 -6 1 936 979 142 6 6 chr17 46057734 46057911 -49214740 + GA-rich Low_complexity Low_complexity 1 177 0 1 936 297 128 0 0 chr17 46057917 46057964 -49214687 + (GA)n Simple_repeat Simple_repeat 1 47 0 1 936 892 161 15 196 chr17 46057987 46058116 -49214535 - URR1A DNA MER1_type 0 226 106 1 936 1174 61 7 0 chr17 46058116 46058263 -49214388 + B1_Mus1 SINE Alu 1 148 0 1 936 892 161 15 196 chr17 46058263 46058403 -49214248 - URR1A DNA MER1_type -121 105 6 1 936 180 97 0 0 chr17 46058433 46058464 -49214187 + (G)n Simple_repeat Simple_repeat 1 31 0 1 936 553 231 115 94 chr17 46059220 46059411 -49213240 - B3A SINE B2 0 198 4 1 936 212 0 0 35 chr17 46059880 46059909 -49212742 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1 936 294 337 36 2 chr17 46060190 46060344 -49212307 - MIR SINE MIR -78 184 24 1 936 387 329 91 14 chr17 46060454 46060673 -49211978 + L2a LINE L2 2924 3159 -267 1 936 333 0 0 0 chr17 46060795 46060832 -49211819 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 936 327 312 102 23 chr17 46060834 46060962 -49211689 - RSINE1 SINE B4 -26 139 2 1 936 490 288 111 12 chr17 46061036 46061198 -49211453 - B3A SINE B2 -20 178 1 1 936 304 243 243 0 chr17 46061215 46061322 -49211329 + L2a LINE L2 3290 3422 -4 1 936 368 229 82 20 chr17 46061702 46061720 -49210931 + B1F SINE Alu 45 144 -1 1 936 442 184 0 0 chr17 46061720 46061796 -49210855 + ID_B1 SINE B4 146 221 -3 1 936 657 0 0 0 chr17 46062141 46062214 -49210437 + (TTCC)n Simple_repeat Simple_repeat 3 75 0 1 936 432 0 0 0 chr17 46062214 46062261 -49210390 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 936 644 225 114 17 chr17 46063396 46063572 -49209079 + ID_B1 SINE B4 5 197 -27 1 936 475 249 7 7 chr17 46063572 46063844 -49208807 + (CA)n Simple_repeat Simple_repeat 1 272 0 1 936 213 180 0 0 chr17 46063896 46063946 -49208705 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 936 195 288 17 17 chr17 46064272 46064332 -49208319 - MIRm SINE MIR -6 270 211 1 936 504 219 33 12 chr17 46064383 46064521 -49208130 - PB1D7 SINE Alu 0 149 16 1 936 229 381 62 23 chr17 46064530 46064548 -49208103 - B2_Mm2 SINE B2 -9 186 3 1 936 662 283 19 0 chr17 46064548 46064707 -49207944 - RSINE1 SINE B4 0 165 4 1 936 875 192 0 7 chr17 46064742 46064889 -49207762 + B1_Mur4 SINE Alu 5 150 0 1 936 230 299 109 27 chr17 46065271 46065381 -49207270 + LTR33 LTR ERVL 49 167 -348 1 936 257 384 0 11 chr17 46065405 46065492 -49207159 + LTR33 LTR ERVL 211 296 -219 1 936 216 345 96 48 chr17 46067017 46067163 -49205488 - RSINE1 SINE B4 0 165 13 1 936 315 0 0 0 chr17 46067241 46067276 -49205375 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 936 629 258 95 19 chr17 46067551 46067742 -49204909 - B3 SINE B2 -6 210 25 1 936 369 62 0 0 chr17 46067830 46067878 -49204773 + (TC)n Simple_repeat Simple_repeat 1 48 0 1 936 489 17 0 0 chr17 46067878 46067936 -49204715 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 936 540 0 0 0 chr17 46068806 46068866 -49203785 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 936 567 140 60 0 chr17 46068902 46069002 -49203649 - B3A SINE B2 -91 107 2 1 936 456 200 0 0 chr17 46069070 46069215 -49203436 + (TG)n Simple_repeat Simple_repeat 2 146 0 1 936 236 228 9 0 chr17 46069255 46069369 -49203282 + (TG)n Simple_repeat Simple_repeat 2 116 0 1 936 590 184 6 0 chr17 46069393 46069567 -49203084 + (TG)n Simple_repeat Simple_repeat 2 176 0 1 936 283 318 53 7 chr17 46069571 46069723 -49202928 - B3A SINE B2 -17 181 23 1 936 324 181 0 17 chr17 46069893 46070011 -49202640 + CT-rich Low_complexity Low_complexity 1 115 0 1 936 216 0 0 0 chr17 46070053 46070077 -49202574 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 936 695 259 7 0 chr17 46070078 46070225 -49202426 - RSINE1 SINE B4 -15 150 3 1 936 216 229 0 32 chr17 46070240 46070303 -49202348 - BC1_Mm scRNA scRNA -89 63 3 1 936 248 272 84 32 chr17 46070397 46070492 -49202159 - MIR SINE MIR -76 132 33 1 936 277 216 178 0 chr17 46071448 46071545 -49201106 + MTD LTR MaLR 1 104 -315 1 936 252 0 0 0 chr17 46071546 46071574 -49201077 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 936 249 96 18 71 chr17 46071574 46071622 -49201029 + MTE2b LTR MaLR 330 377 -2 1 936 333 280 205 58 chr17 46073177 46073348 -49199303 - B3A SINE B2 -1 197 2 1 936 450 254 28 78 chr17 46074375 46074516 -49198135 + B1F1 SINE Alu 14 147 -2 1 936 185 341 77 31 chr17 46074554 46074684 -49197967 - MIRc SINE MIR -46 222 87 1 936 807 128 0 32 chr17 46075029 46075214 -49197437 + (CA)n Simple_repeat Simple_repeat 1 179 0 1 936 614 192 25 16 chr17 46075544 46075666 -49196985 + B1F SINE Alu 27 149 0 1 936 866 233 25 20 chr17 46077610 46077807 -49194844 + B3A SINE B2 1 198 0 1 936 237 240 0 0 chr17 46077839 46077889 -49194762 + B3 SINE B2 1 50 -166 1 936 396 0 0 0 chr17 46077897 46077941 -49194710 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 936 387 0 0 0 chr17 46077941 46077983 -49194668 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 936 756 120 17 0 chr17 46078235 46078352 -49194299 - B1_Mur4 SINE Alu -27 123 5 1 936 347 256 0 129 chr17 46078242 46078381 -49194270 - MT2B LTR ERVL -337 264 144 1 936 241 259 17 0 chr17 46078355 46078413 -49194238 - B3A SINE B2 -136 62 4 1 936 1085 257 84 22 chr17 46078568 46078820 -49193831 + B4 SINE B4 1 254 -38 1 936 673 255 87 0 chr17 46078820 46078969 -49193682 + RSINE1 SINE B4 4 165 0 1 936 1085 257 84 22 chr17 46078969 46078990 -49193661 + B4 SINE B4 255 290 -2 1 936 324 0 0 0 chr17 46079021 46079057 -49193594 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 936 1013 113 11 11 chr17 46079523 46079702 -49192949 + (TCC)n Simple_repeat Simple_repeat 2 180 0 1 936 405 0 0 0 chr17 46079702 46079747 -49192904 + (TTC)n Simple_repeat Simple_repeat 1 45 0 1 936 713 245 7 0 chr17 46079748 46079891 -49192760 - B1_Mur1 SINE Alu -5 144 1 1 936 1188 204 0 31 chr17 46079902 46080125 -49192526 - B3 SINE B2 0 216 1 1 936 228 270 13 39 chr17 46080266 46080343 -49192308 - MER5B DNA MER1_type -97 81 7 1 936 415 271 24 12 chr17 46082872 46083042 -49189609 + B4A SINE B4 2 220 -72 1 936 515 272 30 123 chr17 46083297 46083532 -49189119 + B3 SINE B2 4 216 0 1 936 207 0 0 0 chr17 46083795 46083818 -49188833 + (GA)n Simple_repeat Simple_repeat 1 23 0 1 936 465 19 0 0 chr17 46083934 46083988 -49188663 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 936 596 241 130 7 chr17 46084227 46084373 -49188278 + RSINE1 SINE B4 2 165 0 1 936 437 341 42 15 chr17 46084453 46084712 -49187939 - L1MA5 LINE L1 -79 6221 5956 1 936 192 282 0 0 chr17 46084775 46084853 -49187798 + (CA)n Simple_repeat Simple_repeat 2 79 0 1 936 318 383 13 0 chr17 46084883 46085037 -49187614 + (CA)n Simple_repeat Simple_repeat 1 156 0 1 936 495 223 64 78 chr17 46085788 46085929 -49186722 + ID_B1 SINE B4 84 222 -2 1 936 242 347 40 8 chr17 46086257 46086382 -49186269 + L5 LINE RTE 1630 1758 -507 1 936 946 151 147 30 chr17 46086440 46086638 -49186013 + URR1B DNA MER1_type 5 225 0 1 936 251 211 35 0 chr17 46086732 46086789 -49185862 + GA-rich Low_complexity Low_complexity 1 59 0 1 936 194 309 51 60 chr17 46086815 46086839 -49185812 + MIRc SINE MIR 49 73 -195 1 936 842 210 102 0 chr17 46086839 46087025 -49185626 + B3 SINE B2 1 205 -11 1 936 268 300 60 24 chr17 46087025 46087180 -49185471 + MIR SINE MIR 74 227 -35 1 936 1248 66 0 0 chr17 46087280 46087447 -49185204 + (TTTC)n Simple_repeat Simple_repeat 2 168 0 1 936 451 221 0 37 chr17 46087784 46087892 -49184759 + MER5A DNA MER1_type 6 109 -80 1 936 580 228 0 9 chr17 46088457 46088572 -49184079 + RSINE1 SINE B4 11 124 -41 1 936 557 307 78 19 chr17 46089094 46089300 -49183351 + B4A SINE B4 8 225 -67 1 936 586 236 8 0 chr17 46089303 46089426 -49183225 + RSINE1 SINE B4 4 127 -38 1 936 540 95 0 0 chr17 46089516 46089600 -49183051 + (CA)n Simple_repeat Simple_repeat 1 84 0 1 936 456 330 43 36 chr17 46089600 46089905 -49182746 + L1ME1 LINE L1 5748 6054 -125 1 936 380 252 60 17 chr17 46089990 46090107 -49182544 + RSINE1 SINE B4 44 165 0 1 936 495 230 26 138 chr17 46090195 46090427 -49182224 + B3 SINE B2 8 213 -3 1 936 474 198 0 40 chr17 46090427 46090527 -49182124 + B1_Mur2 SINE Alu 3 98 -51 1 936 225 0 0 0 chr17 46090531 46090556 -49182095 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 1 936 655 201 144 40 chr17 46090914 46091116 -49181535 + B4A SINE B4 8 230 -62 1 936 742 226 44 39 chr17 46091116 46091296 -49181355 + B3A SINE B2 2 182 -16 1 936 26 30 0 0 chr17 46091297 46091330 -49181321 + AT_rich Low_complexity Low_complexity 1 33 0 1 936 455 247 241 0 chr17 46091332 46091506 -49181145 - B3 SINE B2 0 216 1 1 936 885 226 0 17 chr17 46091560 46091740 -49180911 + B3 SINE B2 40 216 0 1 936 246 293 13 39 chr17 46091743 46091821 -49180830 + B4A SINE B4 216 291 -1 1 936 231 270 16 0 chr17 46091823 46091886 -49180765 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 936 589 300 13 7 chr17 46091978 46092129 -49180522 + RSINE1 SINE B4 1 152 -13 1 936 468 0 0 0 chr17 46092132 46092184 -49180467 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 936 216 0 0 0 chr17 46093040 46093064 -49179587 + (TC)n Simple_repeat Simple_repeat 1 24 0 2 936 360 111 0 0 chr17 46093422 46093476 -49179175 + (TGAA)n Simple_repeat Simple_repeat 2 55 0 2 936 377 365 13 47 chr17 46093929 46094165 -49178486 - MIR SINE MIR -14 248 21 2 936 828 234 90 0 chr17 46096014 46096202 -49176449 + B3 SINE B2 11 215 -1 2 936 195 407 13 40 chr17 46096260 46096411 -49176240 - MIR SINE MIR -8 254 108 2 936 502 337 13 113 chr17 46096644 46096945 -49175706 + B4A SINE B4 1 271 -21 2 936 281 26 26 0 chr17 46097108 46097146 -49175505 + (TTG)n Simple_repeat Simple_repeat 3 41 0 2 936 316 278 93 23 chr17 46097202 46097331 -49175320 - RSINE1 SINE B4 -12 153 16 2 936 305 313 12 0 chr17 46097364 46097447 -49175204 - PB1D7 SINE Alu -10 110 27 2 936 426 108 0 0 chr17 46097583 46097648 -49175003 + (TATG)n Simple_repeat Simple_repeat 2 66 0 2 936 729 58 0 0 chr17 46097927 46098030 -49174621 + (TG)n Simple_repeat Simple_repeat 2 104 0 2 936 184 337 82 0 chr17 46098149 46098247 -49174404 - L3 LINE CR1 -89 4400 4295 2 936 396 0 0 0 chr17 46098572 46098616 -49174035 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 936 457 134 224 10 chr17 46099536 46099634 -49173017 - PB1D9 SINE Alu -1 119 1 2 936 553 61 24 0 chr17 46099842 46099924 -49172727 + (GAA)n Simple_repeat Simple_repeat 3 86 0 2 936 467 95 14 0 chr17 46099957 46100031 -49172620 + (GGAA)n Simple_repeat Simple_repeat 2 76 0 2 936 819 157 15 0 chr17 46100060 46100194 -49172457 + B1_Mus2 SINE Alu 2 137 -10 2 936 287 240 57 57 chr17 46100101 46100207 -49172444 + RLTR25B LTR ERVK 444 549 -479 2 936 439 336 87 26 chr17 46102929 46103195 -49169456 + LTR16C LTR ERVL 149 430 -59 2 936 515 205 128 0 chr17 46103357 46103474 -49169177 - ID_B1 SINE B4 -12 212 81 2 936 357 288 29 9 chr17 46104368 46104473 -49168178 - RSINE1 SINE B4 -37 128 22 2 936 579 233 30 15 chr17 46104479 46104614 -49168037 + MTD LTR MaLR 7 143 -276 2 936 332 79 371 0 chr17 46104625 46104714 -49167937 + MTD LTR MaLR 246 367 -52 2 936 1035 251 65 71 chr17 46105295 46105646 -49167005 + MTE2b LTR MaLR 20 368 -11 2 936 467 349 110 18 chr17 46106004 46106442 -49166209 + L1MC4a LINE L1 5456 5933 -1949 2 936 510 186 98 63 chr17 46106899 46107042 -49165609 + B1_Mur2 SINE Alu 1 148 -1 2 936 254 336 89 76 chr17 46107113 46107271 -49165380 + RSINE1 SINE B4 2 161 -4 2 936 710 277 38 0 chr17 46107457 46107641 -49165010 - ID_B1 SINE B4 -27 197 7 2 936 729 208 0 0 chr17 46108702 46108875 -49163776 + (CA)n Simple_repeat Simple_repeat 1 173 0 2 936 923 238 10 0 chr17 46109841 46110043 -49162608 - ID_B1 SINE B4 -20 204 1 2 936 217 299 91 20 chr17 46110815 46110914 -49161737 + B3A SINE B2 6 111 -87 2 936 447 281 38 27 chr17 46110864 46111047 -49161604 + B4A SINE B4 74 258 -34 2 936 288 200 0 0 chr17 46111077 46111132 -49161519 + B1_Mur2 SINE Alu 95 149 0 2 936 493 171 0 26 chr17 46111136 46111250 -49161401 + GA-rich Low_complexity Low_complexity 2 112 0 2 936 251 279 44 0 chr17 46111411 46111479 -49161172 - ID4_ SINE ID -1 82 12 2 936 275 232 61 0 chr17 46111484 46111566 -49161085 + MER33 DNA MER1_type 233 319 -5 2 936 204 40 0 0 chr17 46111978 46112003 -49160648 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 2 936 952 148 7 0 chr17 46112005 46112147 -49160504 - B1_Mur4 SINE Alu -5 145 3 2 936 29 0 0 0 chr17 46112155 46112184 -49160467 + AT_rich Low_complexity Low_complexity 1 29 0 2 936 241 259 21 86 chr17 46112230 46112323 -49160328 - B4A SINE B4 -20 272 186 2 936 459 253 0 0 chr17 46112352 46112443 -49160208 - RSINE1 SINE B4 -29 136 46 2 936 281 247 151 0 chr17 46112465 46112538 -49160113 - B4 SINE B4 -16 276 193 2 936 540 0 0 0 chr17 46113913 46113973 -49158678 + (GA)n Simple_repeat Simple_repeat 2 61 0 2 936 536 53 13 0 chr17 46114041 46114117 -49158534 + (CA)n Simple_repeat Simple_repeat 2 78 0 2 936 389 230 0 99 chr17 46114364 46114475 -49158176 + PB1D10 SINE Alu 2 101 -16 2 936 324 298 7 11 chr17 46114538 46114673 -49157978 + PB1D10 SINE Alu 15 147 -2 2 936 2461 138 40 10 chr17 46115027 46115429 -49157222 - MTC LTR MaLR -7 414 1 2 936 234 276 0 124 chr17 46115488 46115633 -49157018 - L3 LINE CR1 -1969 2520 2394 2 936 426 302 118 0 chr17 46115855 46115974 -49156677 + ID_B1 SINE B4 84 216 -8 2 936 181 277 21 0 chr17 46116173 46116220 -49156431 + L2b LINE L2 3129 3176 -199 2 936 248 224 194 0 chr17 46116469 46116536 -49156115 - PB1D10 SINE Alu -36 81 2 2 936 457 289 107 0 chr17 46116853 46117002 -49155649 - B3A SINE B2 -32 166 2 2 936 274 124 374 10 chr17 46117110 46117209 -49155442 - B2_Mm2 SINE B2 -14 181 47 2 936 1215 88 0 0 chr17 46117246 46117416 -49155235 - B2_Mm2 SINE B2 -24 171 2 2 936 802 220 145 0 chr17 46118146 46118332 -49154319 + B3 SINE B2 4 216 0 2 936 625 270 0 0 chr17 46118348 46118485 -49154166 + ID_B1 SINE B4 82 218 -6 2 936 632 226 0 34 chr17 46118524 46118794 -49153857 + (CA)n Simple_repeat Simple_repeat 1 260 0 2 936 244 299 125 33 chr17 46119383 46119535 -49153116 + Tigger13a DNA MER2_type 225 390 -381 2 936 235 284 15 0 chr17 46119835 46119902 -49152749 - ID4_ SINE ID -4 79 12 2 936 387 299 78 16 chr17 46120056 46120185 -49152466 - RSINE1 SINE B4 -28 137 1 2 936 1248 75 0 23 chr17 46120189 46120531 -49152120 + (TCTA)n Simple_repeat Simple_repeat 1 333 0 2 936 862 199 0 0 chr17 46120539 46120685 -49151966 - B1_Mus1 SINE Alu -1 147 2 2 936 577 334 25 16 chr17 46120780 46121095 -49151556 - L1MA4 LINE L1 -298 5993 5662 2 936 1144 62 14 7 chr17 46121118 46121264 -49151387 - B1_Mus1 SINE Alu 0 148 2 2 936 450 75 0 0 chr17 46121332 46121399 -49151252 + (TCTG)n Simple_repeat Simple_repeat 4 70 0 2 936 217 348 25 17 chr17 46121741 46121861 -49150790 + L2c LINE L2 2729 2849 -570 2 936 338 310 15 45 chr17 46121912 46122044 -49150607 + L2c LINE L2 3017 3144 -243 2 936 303 318 36 0 chr17 46122051 46122161 -49150490 - L2a LINE L2 -9 3417 3304 2 936 217 283 0 0 chr17 46122164 46122217 -49150434 + ID4_ SINE ID 5 57 -26 2 936 497 101 22 0 chr17 46122250 46122339 -49150312 + (CAGAGA)n Simple_repeat Simple_repeat 6 96 0 2 936 430 196 25 17 chr17 46122445 46122565 -49150086 + PB1D9 SINE Alu 9 119 -1 2 936 356 308 0 119 chr17 46122578 46122729 -49149922 + ID_B1 SINE B4 2 134 -90 2 936 1091 68 0 0 chr17 46122901 46123048 -49149603 + B2_Mm2 SINE B2 2 148 -47 2 936 441 0 0 0 chr17 46123048 46123097 -49149554 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 2 936 225 0 0 0 chr17 46123191 46123216 -49149435 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 936 231 195 0 0 chr17 46123640 46123681 -49148970 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 936 346 200 0 0 chr17 46124373 46124438 -49148213 + ID SINE ID 2 66 -158 2 936 240 361 42 0 chr17 46125024 46125143 -49147508 - L2b LINE L2 -1 3374 3251 2 936 539 304 76 6 chr17 46125166 46125338 -49147313 - MIR SINE MIR -7 255 72 2 936 277 263 111 0 chr17 46125429 46125528 -49147123 - L2c LINE L2 0 3387 3278 2 936 1075 205 49 0 chr17 46125639 46125844 -49146807 + B3 SINE B2 2 216 0 2 936 423 318 24 0 chr17 46125930 46126056 -49146595 + ID_B1 SINE B4 81 209 -15 2 936 959 45 19 25 chr17 46126063 46126221 -49146430 + (GGAGA)n Simple_repeat Simple_repeat 5 161 0 2 936 757 164 13 6 chr17 46126223 46126382 -49146269 + GA-rich Low_complexity Low_complexity 4 163 0 2 936 1742 168 54 112 chr17 46127062 46127098 -49145553 - RMER4B LTR ERVK -11 455 422 2 936 3315 53 5 0 chr17 46127098 46127496 -49145155 - MTB LTR MaLR 0 400 1 2 936 2053 132 82 25 chr17 46127496 46127942 -49144709 - RMER4B LTR ERVK -45 421 1 2 936 191 188 21 0 chr17 46127982 46128030 -49144621 + GA-rich Low_complexity Low_complexity 5 53 0 2 936 1254 310 97 36 chr17 46128035 46128099 -49144552 + L1MB3 LINE L1 5298 5361 -822 2 936 3267 62 0 2 chr17 46128099 46128500 -49144151 + MTB LTR MaLR 1 400 0 2 936 1254 310 97 36 chr17 46128500 46129269 -49143382 + L1MB3 LINE L1 5362 6182 -1 2 936 189 271 100 17 chr17 46129370 46129490 -49143161 + MIRc SINE MIR 47 176 -92 2 936 224 310 67 22 chr17 46129549 46129638 -49143013 + B4 SINE B4 1 93 -199 2 936 826 190 7 26 chr17 46129731 46129882 -49142769 + B1_Mur1 SINE Alu 1 148 -1 2 936 240 86 0 0 chr17 46129979 46130014 -49142637 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 2 936 246 156 0 0 chr17 46130096 46130141 -49142510 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 936 477 244 25 42 chr17 46130357 46130477 -49142174 - PB1D7 SINE Alu -2 118 1 2 936 702 204 13 58 chr17 46130487 46130643 -49142008 - B1_Mur3 SINE Alu 0 149 1 2 936 345 277 12 15 chr17 46132839 46133106 -49139545 + (TCCA)n Simple_repeat Simple_repeat 1 265 0 2 936 252 265 14 7 chr17 46133156 46133304 -49139347 + (TCCA)n Simple_repeat Simple_repeat 1 149 0 2 936 455 301 13 6 chr17 46133328 46133406 -49139245 + (TCCA)n Simple_repeat Simple_repeat 4 80 0 2 936 180 0 0 0 chr17 46133406 46133426 -49139225 + (CCAA)n Simple_repeat Simple_repeat 4 23 0 2 936 455 301 13 6 chr17 46133426 46133504 -49139147 + (TCCA)n Simple_repeat Simple_repeat 4 83 0 2 936 234 292 31 20 chr17 46133534 46133632 -49139019 + (TCCA)n Simple_repeat Simple_repeat 1 99 0 2 936 531 31 0 0 chr17 46134963 46135028 -49137623 + (GA)n Simple_repeat Simple_repeat 1 65 0 2 936 357 292 37 93 chr17 46135793 46135822 -49136829 - B2_Mm2 SINE B2 -15 180 152 2 936 333 0 0 0 chr17 46135822 46135859 -49136792 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 936 405 0 0 0 chr17 46135859 46135903 -49136748 + (GA)n Simple_repeat Simple_repeat 1 45 0 3 936 693 214 8 0 chr17 46135903 46136034 -49136617 - B3A SINE B2 -39 159 28 3 936 258 265 32 205 chr17 46136129 46136209 -49136442 + B4 SINE B4 77 225 -63 3 936 587 101 69 20 chr17 46136209 46136310 -49136341 + B1_Mur3 SINE Alu 43 148 -1 3 936 272 308 11 67 chr17 46136351 46136499 -49136152 - L2a LINE L2 -264 3111 2969 3 936 588 191 0 0 chr17 46136988 46137166 -49135485 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 3 14 594 131 54 0 chr17 46137197 46137466 -49135185 + (TCTA)n Simple_repeat Simple_repeat 1 283 0 3 937 258 280 95 55 chr17 46137466 46137535 -49135116 + YREP_Mm Unknown Unknown 120 270 -1542 3 937 557 178 56 0 chr17 46137535 46137642 -49135009 - ID_B1 SINE B4 -9 215 103 3 937 258 280 95 55 chr17 46137642 46137666 -49134985 + YREP_Mm Unknown Unknown 271 327 -1485 3 937 219 287 29 96 chr17 46137855 46137959 -49134692 + RSINE1 SINE B4 64 160 -5 3 937 495 354 40 0 chr17 46137981 46138179 -49134472 + B4A SINE B4 2 207 -85 3 937 445 178 234 0 chr17 46138197 46138304 -49134347 + B1F2 SINE Alu 10 141 -8 3 937 352 340 20 69 chr17 46138304 46138323 -49134328 + B4A SINE B4 95 209 -83 3 937 825 162 184 32 chr17 46138323 46138508 -49134143 + B3 SINE B2 1 213 -3 3 937 352 340 20 69 chr17 46138508 46138583 -49134068 + B4A SINE B4 210 286 -6 3 937 1145 249 122 16 chr17 46139131 46139499 -49133152 + MTD LTR MaLR 13 419 0 3 937 428 258 58 9 chr17 46139712 46139846 -49132805 - B1F SINE Alu -8 141 3 3 937 192 234 0 0 chr17 46139944 46139991 -49132660 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 937 435 268 71 14 chr17 46140003 46140143 -49132508 - L2a LINE L2 -257 3169 3022 3 937 450 0 0 0 chr17 46141689 46141739 -49130912 + (TC)n Simple_repeat Simple_repeat 2 51 0 3 937 21 36 0 0 chr17 46141810 46141838 -49130813 + AT_rich Low_complexity Low_complexity 1 28 0 3 937 465 239 22 141 chr17 46141838 46141919 -49130732 - RSINE1 SINE B4 0 165 100 3 937 252 0 0 0 chr17 46141919 46141947 -49130704 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 937 465 239 22 141 chr17 46141947 46142050 -49130601 - RSINE1 SINE B4 -66 99 3 3 937 664 164 0 1 chr17 46143125 46143260 -49129391 + B1_Mur4 SINE Alu 1 134 -15 3 937 247 319 77 0 chr17 46143267 46143358 -49129293 + PB1D7 SINE Alu 23 120 0 3 937 264 263 0 0 chr17 46143962 46144019 -49128632 - MER53 DNA hAT -1 192 136 3 937 210 351 0 0 chr17 46145039 46145096 -49127555 + (TCCA)n Simple_repeat Simple_repeat 1 57 0 3 937 646 234 29 7 chr17 46145270 46145408 -49127243 - B1F SINE Alu -8 141 1 3 937 322 283 23 30 chr17 46145415 46145546 -49127105 - MIRb SINE MIR -58 210 81 3 937 256 148 33 0 chr17 46145566 46145627 -49127024 + CT-rich Low_complexity Low_complexity 4 66 0 3 937 216 122 0 0 chr17 46145637 46145678 -49126973 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 937 983 104 20 20 chr17 46145678 46145825 -49126826 - B1_Mus1 SINE Alu -1 147 1 3 937 218 264 79 22 chr17 46145965 46146054 -49126597 - MIRb SINE MIR -85 183 90 3 937 1128 44 38 0 chr17 46147960 46148120 -49124531 + (CATA)n Simple_repeat Simple_repeat 3 168 0 3 937 485 194 41 0 chr17 46148124 46148222 -49124429 - B1_Mur2 SINE Alu -8 141 40 3 937 472 324 53 24 chr17 46148222 46148333 -49124318 - ID_B1 SINE B4 -8 216 2 3 937 1306 262 33 33 chr17 46148520 46148883 -49123768 + Lx6 LINE L1 7072 7434 -26 3 937 405 0 0 0 chr17 46148886 46148931 -49123720 + (TAGG)n Simple_repeat Simple_repeat 1 45 0 3 937 1119 129 0 0 chr17 46148932 46149110 -49123541 + (CAGA)n Simple_repeat Simple_repeat 3 180 0 3 937 1114 152 118 25 chr17 46150226 46150429 -49122222 + URR1A DNA MER1_type 5 226 0 3 937 456 308 80 32 chr17 46150863 46151052 -49121599 + MIRc SINE MIR 1 201 -67 3 937 906 42 0 0 chr17 46151198 46151317 -49121334 + (TG)n Simple_repeat Simple_repeat 2 120 0 3 937 852 171 21 0 chr17 46151418 46151558 -49121093 + B1_Mur2 SINE Alu 1 143 -6 3 937 209 109 0 21 chr17 46151573 46151620 -49121031 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 3 937 774 214 14 7 chr17 46151640 46151786 -49120865 + B1_Mur1 SINE Alu 3 149 0 3 937 313 275 83 8 chr17 46151799 46151931 -49120720 + MER33 DNA MER1_type 139 280 -44 3 937 846 124 93 0 chr17 46152112 46152241 -49120410 + B1_Mur2 SINE Alu 1 141 -8 3 937 1033 283 52 0 chr17 46152254 46152526 -49120125 + B4A SINE B4 7 292 0 3 937 271 291 136 0 chr17 46152585 46152695 -49119956 - L2b LINE L2 -217 3158 3034 3 937 359 338 58 0 chr17 46152778 46152932 -49119719 - L2b LINE L2 -519 2900 2738 3 937 22 56 0 0 chr17 46154124 46154160 -49118491 + AT_rich Low_complexity Low_complexity 1 36 0 3 937 261 98 0 0 chr17 46154253 46154294 -49118357 + (TA)n Simple_repeat Simple_repeat 1 41 0 3 937 411 21 0 0 chr17 46154473 46154521 -49118130 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 937 285 116 43 0 chr17 46155409 46155478 -49117173 + (TA)n Simple_repeat Simple_repeat 2 73 0 3 937 197 286 79 0 chr17 46157376 46157439 -49115212 - L2b LINE L2 -96 3279 3212 3 937 237 108 0 0 chr17 46157851 46157888 -49114763 + (TC)n Simple_repeat Simple_repeat 1 37 0 3 937 207 311 0 13 chr17 46159300 46159375 -49113276 + GA-rich Low_complexity Low_complexity 3 76 0 3 937 186 297 188 0 chr17 46163386 46163487 -49109164 + MIR3 SINE MIR 59 178 -30 3 937 252 0 0 0 chr17 46163674 46163702 -49108949 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 937 202 227 0 43 chr17 46167577 46167646 -49105005 + (CGGGG)n Simple_repeat Simple_repeat 2 67 0 3 937 26 30 0 0 chr17 46168419 46168452 -49104199 + GC_rich Low_complexity Low_complexity 1 33 0 3 937 208 237 0 0 chr17 46168528 46168566 -49104085 + polypyrimidine Low_complexity Low_complexity 2 39 0 3 937 185 159 0 22 chr17 46169723 46169768 -49102883 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 937 216 0 0 0 chr17 46170331 46170355 -49102296 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 937 1335 116 30 93 chr17 46171368 46171605 -49101046 + URR1A DNA MER1_type 3 224 -2 3 937 337 68 68 0 chr17 46171758 46171817 -49100834 + (TATATG)n Simple_repeat Simple_repeat 3 65 0 3 937 405 123 0 0 chr17 46172665 46172730 -49099921 + (TCC)n Simple_repeat Simple_repeat 2 66 0 3 937 419 207 8 0 chr17 46173838 46173929 -49098722 - PB1D10 SINE Alu -19 98 7 3 937 301 234 63 11 chr17 46174087 46174182 -49098469 + MIRb SINE MIR 118 217 -51 3 937 465 256 8 67 chr17 46174289 46174423 -49098228 + ID_B1 SINE B4 97 222 -2 3 937 183 129 0 0 chr17 46174470 46174501 -49098150 + (GGGA)n Simple_repeat Simple_repeat 3 33 0 3 937 302 384 20 74 chr17 46175579 46175728 -49096923 + MamRep38 DNA hAT 84 224 -71 3 937 1000 231 12 102 chr17 46177027 46177273 -49095378 + ID_B1 SINE B4 1 224 0 3 937 275 170 0 0 chr17 46178790 46178837 -49093814 - ID_B1 SINE B4 -4 220 174 3 937 273 236 178 11 chr17 46178837 46178876 -49093775 - PB1D10 SINE Alu -1 112 12 3 937 180 97 0 0 chr17 46178909 46178940 -49093711 + (T)n Simple_repeat Simple_repeat 1 31 0 3 937 1596 236 86 82 chr17 46179093 46179567 -49093084 - RMER15 LTR ERVL -24 551 68 3 937 1074 44 66 0 chr17 46179567 46179704 -49092947 - B1_Mm SINE Alu 0 147 2 3 937 1596 236 86 82 chr17 46179704 46179752 -49092899 - RMER15 LTR ERVL -508 67 27 3 937 236 300 78 29 chr17 46179873 46179976 -49092675 - MIRc SINE MIR -138 130 23 3 937 245 254 119 0 chr17 46180008 46180075 -49092576 + ID2 SINE ID 8 82 -1 3 937 1078 232 43 5 chr17 46180314 46180522 -49092129 + B3 SINE B2 1 216 0 3 937 432 273 113 21 chr17 46180802 46180944 -49091707 + B4 SINE B4 4 158 -134 3 937 297 0 0 0 chr17 46180947 46180980 -49091671 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 937 21 0 0 0 chr17 46181087 46181108 -49091543 + GC_rich Low_complexity Low_complexity 1 21 0 3 937 441 192 71 0 chr17 46181134 46181233 -49091418 + B1F SINE Alu 5 110 -39 3 937 289 372 0 21 chr17 46181317 46181413 -49091238 + RSINE1 SINE B4 66 159 -6 3 937 992 0 0 30 chr17 46181449 46181581 -49091070 + (GAA)n Simple_repeat Simple_repeat 3 130 0 3 937 376 318 16 127 chr17 46181935 46182187 -49090464 + MARNA DNA Mariner 148 371 -215 3 937 378 0 0 0 chr17 46182246 46182288 -49090363 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 937 420 244 148 8 chr17 46182293 46182421 -49090230 - RSINE1 SINE B4 -16 149 4 3 937 851 189 0 0 chr17 46182443 46182591 -49090060 - B1_Mur1 SINE Alu -1 148 1 3 937 871 168 27 40 chr17 46183033 46183045 -49089606 - B1_Mur1 SINE Alu -1 148 142 3 937 540 0 0 0 chr17 46183045 46183105 -49089546 + (TG)n Simple_repeat Simple_repeat 2 61 0 3 937 871 168 27 40 chr17 46183105 46183241 -49089410 - B1_Mur1 SINE Alu -8 141 2 3 937 353 124 67 11 chr17 46183276 46183366 -49089285 + CT-rich Low_complexity Low_complexity 3 97 0 3 937 543 295 15 40 chr17 46183370 46183571 -49089080 + B3A SINE B2 3 198 0 3 937 1271 98 15 75 chr17 46183577 46183776 -49088875 - B2_Mm2 SINE B2 -8 187 1 3 937 195 69 0 0 chr17 46183777 46183806 -49088845 + (A)n Simple_repeat Simple_repeat 1 29 0 3 937 366 260 10 68 chr17 46184044 46184147 -49088504 + PB1D9 SINE Alu 4 100 -20 3 937 443 348 39 86 chr17 46184187 46184390 -49088261 + MLT1E3 LTR MaLR 208 408 -216 3 937 278 239 15 0 chr17 46184390 46184457 -49088194 + ID4_ SINE ID 3 70 -13 3 937 443 348 39 86 chr17 46184457 46184612 -49088039 + MLT1E3 LTR MaLR 409 549 -75 3 937 540 259 109 54 chr17 46184704 46184888 -49087763 - B3A SINE B2 -4 194 1 3 937 220 315 89 11 chr17 46185128 46185218 -49087433 + PB1D9 SINE Alu 9 105 -15 3 937 602 250 55 38 chr17 46185221 46185404 -49087247 + B3 SINE B2 27 212 -4 3 937 403 246 7 61 chr17 46185414 46185513 -49087138 + polypurine Low_complexity Low_complexity 4 101 0 4 937 1211 36 0 0 chr17 46185513 46185651 -49087000 + B1_Mm SINE Alu 1 138 -9 4 937 216 86 0 0 chr17 46185651 46185686 -49086965 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 937 403 246 7 61 chr17 46185686 46185732 -49086919 + polypurine Low_complexity Low_complexity 102 141 0 4 937 244 256 35 47 chr17 46185823 46185909 -49086742 - ID_B1 SINE B4 -25 199 115 4 937 382 358 104 90 chr17 46186011 46186290 -49086361 - B4A SINE B4 -6 286 4 4 937 467 322 10 5 chr17 46186300 46186445 -49086206 - B1F SINE Alu -7 143 1 4 937 226 426 5 15 chr17 46187580 46187785 -49084866 + Charlie23a DNA MER1_type 133 335 -4 4 937 330 279 17 43 chr17 46187762 46187878 -49084773 + ID_B1 SINE B4 55 167 -57 4 937 296 247 113 41 chr17 46187801 46187898 -49084753 + PB1D10 SINE Alu 14 117 0 4 937 669 314 9 24 chr17 46187898 46188110 -49084541 + B4A SINE B4 2 210 -82 4 937 288 267 17 87 chr17 46190962 46191077 -49081574 + MT2B LTR ERVL 154 260 -341 4 937 588 261 7 7 chr17 46190974 46191113 -49081538 + ID_B1 SINE B4 84 222 -2 4 937 337 278 0 0 chr17 46191129 46191201 -49081450 + ID4 SINE ID 1 72 -11 4 937 437 0 19 0 chr17 46191204 46191257 -49081394 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 937 288 246 29 0 chr17 46191845 46191914 -49080737 - MTD LTR MaLR -14 405 335 4 937 811 185 7 14 chr17 46191977 46192125 -49080526 + B1_Mur3 SINE Alu 1 147 -2 4 937 279 0 0 0 chr17 46192150 46192181 -49080470 + (TC)n Simple_repeat Simple_repeat 1 31 0 4 937 288 0 0 0 chr17 46192181 46192212 -49080439 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 937 297 301 12 35 chr17 46192214 46192300 -49080351 - MTD LTR MaLR -323 96 13 4 937 1024 57 14 0 chr17 46192337 46192477 -49080174 + B1_Mus2 SINE Alu 6 147 0 4 937 369 304 34 12 chr17 46192575 46192736 -49079915 + B3A SINE B2 7 174 -42 4 937 385 141 19 132 chr17 46192906 46193012 -49079639 + MER104 DNA Tc2 11 104 -77 4 937 285 29 0 0 chr17 46194199 46194233 -49078418 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 937 312 27 0 0 chr17 46194642 46194679 -49077972 + (TC)n Simple_repeat Simple_repeat 1 37 0 4 937 186 43 0 0 chr17 46194737 46194760 -49077891 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 4 937 583 203 23 23 chr17 46194781 46194912 -49077739 - B1_Mur1 SINE Alu -10 139 9 4 937 509 280 33 20 chr17 46194933 46195086 -49077565 - ID_B1 SINE B4 -16 208 54 4 937 2686 111 57 22 chr17 46195119 46195526 -49077125 + MTC LTR MaLR 1 421 0 4 937 301 328 55 46 chr17 46196059 46196282 -49076369 - MIR SINE MIR -17 251 29 4 937 237 246 0 47 chr17 46196521 46196585 -49076066 + MER102b DNA MER1_type 270 330 -11 4 937 354 169 0 0 chr17 46196784 46196849 -49075802 + (TG)n Simple_repeat Simple_repeat 1 65 0 4 937 295 354 12 0 chr17 46196941 46197023 -49075628 - RSINE1 SINE B4 -1 164 82 4 937 405 0 0 0 chr17 46197587 46197632 -49075019 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 937 435 118 0 0 chr17 46197841 46197926 -49074725 + (CATA)n Simple_repeat Simple_repeat 4 88 0 4 937 1383 81 5 11 chr17 46197959 46198146 -49074505 + B2_Mm2 SINE B2 1 186 -9 4 937 379 290 24 16 chr17 46198871 46198997 -49073654 - MLT1A LTR MaLR -230 144 18 4 937 1215 55 0 0 chr17 46199548 46199694 -49072957 + B1_Mm SINE Alu 2 147 0 4 937 312 137 0 0 chr17 46199694 46199745 -49072906 + (A)n Simple_repeat Simple_repeat 1 51 0 4 937 1219 48 14 0 chr17 46199957 46200102 -49072549 + B1_Mus2 SINE Alu 1 147 0 4 937 1303 230 92 18 chr17 46200964 46201300 -49071351 - MTEa LTR MaLR -18 361 1 4 937 387 301 75 7 chr17 46201374 46201552 -49071099 - MTD LTR MaLR 0 419 232 4 937 631 337 47 47 chr17 46201580 46201919 -49070732 - ORR1E LTR MaLR -6 353 15 4 937 442 258 39 8 chr17 46202400 46202529 -49070122 - L1M4c LINE L1 -985 5397 5265 4 937 386 263 0 29 chr17 46202566 46202668 -49069983 - B4 SINE B4 -12 280 182 4 937 482 320 19 32 chr17 46202709 46202867 -49069784 - B4A SINE B4 -113 179 24 4 937 1155 309 85 52 chr17 46202934 46203184 -49069467 - L1M4c LINE L1 -1918 4458 4171 4 937 791 171 41 35 chr17 46203184 46203329 -49069322 - B1_Mus1 SINE Alu -2 146 1 4 937 1155 309 85 52 chr17 46203329 46203552 -49069099 - L1M4c LINE L1 -2206 4170 3973 4 937 261 0 0 0 chr17 46203552 46203581 -49069070 + (GTTTG)n Simple_repeat Simple_repeat 1 29 0 4 937 1155 309 85 52 chr17 46203581 46204050 -49068601 - L1M4c LINE L1 -2404 3972 3486 4 937 845 216 34 87 chr17 46204071 46204279 -49068372 - B3A SINE B2 0 198 2 4 937 583 304 0 12 chr17 46204304 46204464 -49068187 - RSINE1 SINE B4 0 165 8 4 937 569 262 79 0 chr17 46204464 46204666 -49067985 - L1M4c LINE L1 -2887 3495 3278 4 937 207 235 0 0 chr17 46204666 46204717 -49067934 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 937 275 357 14 14 chr17 46204717 46204859 -49067792 - RMER12 LTR ERVK -466 856 715 4 937 260 341 7 102 chr17 46204919 46204933 -49067718 + MT2B2 LTR ERVL 161 209 -375 4 937 432 248 29 0 chr17 46204933 46205038 -49067613 + PB1D7 SINE Alu 11 118 -2 4 937 260 341 7 102 chr17 46205038 46205056 -49067595 + MT2B2 LTR ERVL 210 284 -300 4 937 322 302 124 19 chr17 46205154 46205363 -49067288 - L1M4c LINE L1 -3302 3080 2850 4 937 513 273 64 20 chr17 46205410 46205421 -49067230 - L1M4c LINE L1 -4148 2236 2226 4 937 1161 61 0 13 chr17 46205421 46205570 -49067081 - B1_Mus1 SINE Alu -1 147 1 4 937 513 273 64 20 chr17 46205570 46205760 -49066891 - L1M4c LINE L1 -4159 2225 2026 4 937 728 220 185 38 chr17 46205850 46206034 -49066617 + B3 SINE B2 5 215 -1 4 937 226 136 49 33 chr17 46206035 46206049 -49066602 + A-rich Low_complexity Low_complexity 1 13 0 4 937 948 134 7 7 chr17 46206049 46206192 -49066459 + B1_Mus1 SINE Alu 1 143 -5 4 937 226 136 49 33 chr17 46206192 46206238 -49066413 + A-rich Low_complexity Low_complexity 14 62 0 4 937 586 273 7 26 chr17 46207366 46207520 -49065131 + RSINE1 SINE B4 11 161 -4 4 937 263 93 23 0 chr17 46207526 46207569 -49065082 + (ATG)n Simple_repeat Simple_repeat 2 45 0 4 937 391 38 48 36 chr17 46207778 46207861 -49064790 + (TTTTTG)n Simple_repeat Simple_repeat 6 89 0 4 937 1158 41 0 81 chr17 46207861 46208021 -49064630 - B1_Mus2 SINE Alu 0 147 1 4 937 956 145 14 0 chr17 46208116 46208261 -49064390 + B1_Mus1 SINE Alu 2 148 0 4 937 826 233 6 30 chr17 46209064 46209232 -49063419 - RSINE1 SINE B4 0 165 2 4 937 570 212 32 23 chr17 46209890 46210046 -49062605 + ID_B1 SINE B4 2 160 -132 4 937 269 51 0 25 chr17 46210060 46210100 -49062551 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 937 24 32 0 0 chr17 46210111 46210142 -49062509 + AT_rich Low_complexity Low_complexity 1 31 0 4 937 195 42 0 0 chr17 46211233 46211257 -49061394 + (GGGTG)n Simple_repeat Simple_repeat 1 24 0 4 937 349 234 53 11 chr17 46211513 46211608 -49061043 - RSINE1 SINE B4 -64 101 3 4 937 24 0 0 0 chr17 46211692 46211716 -49060935 + AT_rich Low_complexity Low_complexity 1 24 0 4 937 726 283 163 27 chr17 46213032 46213197 -49059454 + MLT1K LTR MaLR 154 337 -258 4 937 360 0 0 0 chr17 46213197 46213237 -49059414 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 937 726 283 163 27 chr17 46213237 46213385 -49059266 + MLT1K LTR MaLR 338 523 -72 4 937 429 20 0 0 chr17 46213385 46213435 -49059216 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 937 726 283 163 27 chr17 46213435 46213494 -49059157 + MLT1K LTR MaLR 524 577 -18 4 937 392 235 0 0 chr17 46214390 46214475 -49058176 - PB1D9 SINE Alu 0 120 36 4 937 463 292 88 134 chr17 46214631 46214959 -49057692 + MLT1J LTR MaLR 3 315 -197 4 937 388 366 75 32 chr17 46214983 46215265 -49057386 + L2b LINE L2 3081 3374 -1 4 937 463 202 0 0 chr17 46215313 46215397 -49057254 - ID_B1 SINE B4 -8 216 133 4 937 1825 249 30 30 chr17 46215400 46215909 -49056742 + RMER19C LTR ERVK 103 611 0 4 937 310 257 13 26 chr17 46215941 46216017 -49056634 - ID4_ SINE ID -6 77 3 4 937 390 282 8 53 chr17 46216123 46216254 -49056397 + B3A SINE B2 74 198 0 4 937 240 170 0 131 chr17 46216260 46216321 -49056330 + B3A SINE B2 2 54 -144 4 937 1040 199 5 24 chr17 46216362 46216568 -49056083 - B3 SINE B2 -3 213 12 4 937 1073 49 6 100 chr17 46216661 46216821 -49055830 - B1_Mus2 SINE Alu -1 146 2 4 937 297 179 0 0 chr17 46217570 46217629 -49055022 - B3A SINE B2 -155 61 3 4 937 694 226 51 0 chr17 46217732 46217869 -49054782 + B1F2 SINE Alu 1 144 -5 4 937 195 42 0 0 chr17 46217869 46217893 -49054758 + (TTAA)n Simple_repeat Simple_repeat 2 25 0 4 937 462 36 0 0 chr17 46218433 46218489 -49054162 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 937 270 0 0 0 chr17 46219082 46219112 -49053539 + (TCC)n Simple_repeat Simple_repeat 2 31 0 4 937 261 0 0 0 chr17 46219113 46219142 -49053509 + (CTA)n Simple_repeat Simple_repeat 1 29 0 4 937 202 366 12 6 chr17 46219296 46219458 -49053193 + (TGG)n Simple_repeat Simple_repeat 3 165 0 4 937 246 267 0 0 chr17 46219562 46219663 -49052988 + (TGG)n Simple_repeat Simple_repeat 1 101 0 4 937 448 254 10 70 chr17 46219665 46219864 -49052787 - HAL1-2a_MD LINE L1 -499 2525 2339 4 937 207 203 0 0 chr17 46219864 46219928 -49052723 + (ATGGTG)n Simple_repeat Simple_repeat 1 64 0 4 937 295 291 51 47 chr17 46220579 46220704 -49051947 - MLT1E2 LTR MaLR -1 626 503 4 937 352 298 53 15 chr17 46222102 46222235 -49050416 + B4A SINE B4 106 243 -49 4 937 1799 148 48 19 chr17 46222265 46222575 -49050076 + Lx4A LINE L1 6739 7057 -1 4 937 1050 111 0 0 chr17 46222629 46222837 -49049814 + (CA)n Simple_repeat Simple_repeat 1 208 0 4 937 803 253 41 31 chr17 46222936 46223132 -49049519 - ID_B1 SINE B4 -4 220 23 4 937 297 0 0 0 chr17 46224111 46224144 -49048507 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 937 183 80 0 0 chr17 46224157 46224182 -49048469 + (ATG)n Simple_repeat Simple_repeat 3 27 0 4 937 261 57 0 0 chr17 46224184 46224219 -49048432 + (GGA)n Simple_repeat Simple_repeat 3 37 0 4 937 212 258 43 33 chr17 46224497 46224589 -49048062 + MIRb SINE MIR 55 147 -121 5 937 659 191 48 0 chr17 46224796 46224922 -49047729 + B1_Mur1 SINE Alu 1 132 -17 5 937 717 275 70 0 chr17 46225360 46225560 -49047091 + ID_B1 SINE B4 2 215 -9 5 937 266 398 0 26 chr17 46225711 46225827 -49046824 + L2 LINE L2 2379 2491 -928 5 937 1019 196 20 20 chr17 46225827 46226030 -49046621 + B3 SINE B2 1 203 -13 5 937 281 135 0 19 chr17 46226352 46226405 -49046246 + CT-rich Low_complexity Low_complexity 3 54 0 5 937 942 139 21 7 chr17 46226433 46226578 -49046073 - B1_Mur3 SINE Alu -1 148 2 5 937 802 222 98 17 chr17 46226846 46227020 -49045631 + ID_B1 SINE B4 8 195 -29 5 937 510 213 21 0 chr17 46227507 46227601 -49045050 + ID_B1 SINE B4 2 97 -127 5 937 2134 129 70 6 chr17 46227601 46227959 -49044692 + ORR1B1 LTR MaLR 1 381 -13 5 937 364 310 14 100 chr17 46227958 46228098 -49044553 + ID_B1 SINE B4 97 224 0 5 937 190 205 0 80 chr17 46228246 46228296 -49044355 + MIR SINE MIR 38 81 -195 5 937 250 255 44 97 chr17 46228344 46228457 -49044194 + MIR SINE MIR 40 146 -116 5 937 497 227 164 0 chr17 46228458 46228568 -49044083 + RSINE1 SINE B4 17 144 -21 5 937 495 0 0 0 chr17 46228574 46228629 -49044022 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 937 241 356 0 0 chr17 46229003 46229093 -49043558 - LTR85c LTR Gypsy? -317 506 417 5 937 1251 94 44 0 chr17 46229412 46229592 -49043059 - B2_Mm2 SINE B2 -7 188 1 5 937 307 75 0 0 chr17 46229592 46229631 -49043020 - B2_Mm2 SINE B2 -156 39 1 5 937 367 305 91 8 chr17 46229778 46229910 -49042741 - B1F SINE Alu -2 147 5 5 937 318 372 54 71 chr17 46230063 46230231 -49042420 + B3A SINE B2 8 172 -26 5 937 840 282 36 14 chr17 46230384 46230603 -49042048 + MTEa LTR MaLR 154 377 -2 5 937 188 189 0 0 chr17 46230983 46231020 -49041631 - MIRc SINE MIR -128 140 104 5 937 1825 43 13 4 chr17 46231021 46231254 -49041397 - ORR1A2 LTR MaLR 0 327 93 5 937 195 129 0 0 chr17 46231254 46231285 -49041366 + (T)n Simple_repeat Simple_repeat 1 31 0 5 937 638 114 14 2 chr17 46231645 46231752 -49040899 - ORR1A2 LTR MaLR -250 144 1 5 937 609 163 61 0 chr17 46232193 46232235 -49040416 + B1_Mus2 SINE Alu 17 58 -89 5 937 771 42 0 0 chr17 46232235 46232330 -49040321 + (TC)n Simple_repeat Simple_repeat 1 95 0 5 937 609 163 61 0 chr17 46232330 46232385 -49040266 + B1_Mus2 SINE Alu 59 119 -28 5 937 354 222 0 0 chr17 46232406 46232496 -49040155 + (CA)n Simple_repeat Simple_repeat 1 90 0 5 937 340 341 44 87 chr17 46232744 46232927 -49039724 + MER5B DNA MER1_type 1 175 -3 5 937 275 281 46 38 chr17 46232930 46233052 -49039599 - MIR3 SINE MIR -48 160 43 5 937 396 319 11 0 chr17 46233797 46233888 -49038763 - RSINE1 SINE B4 -19 146 55 5 937 763 179 29 0 chr17 46233891 46234031 -49038620 + B1_Mus2 SINE Alu 3 146 -1 5 937 279 133 0 0 chr17 46234229 46234274 -49038377 + (GGA)n Simple_repeat Simple_repeat 2 46 0 5 937 270 116 0 0 chr17 46234285 46234328 -49038323 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 5 937 658 164 8 49 chr17 46234329 46234451 -49038200 - PB1D10 SINE Alu 0 117 1 5 937 903 277 29 20 chr17 46234454 46234760 -49037891 + L1MB3 LINE L1 5828 6136 -47 5 937 438 261 0 32 chr17 46234769 46234864 -49037787 + ID_B1 SINE B4 128 219 -5 5 937 815 159 14 14 chr17 46234874 46235014 -49037637 + B1_Mur2 SINE Alu 3 142 -7 5 937 602 60 12 0 chr17 46235018 46235101 -49037550 + (GA)n Simple_repeat Simple_repeat 1 84 0 5 937 1007 147 0 6 chr17 46235110 46235288 -49037363 + GA-rich Low_complexity Low_complexity 4 180 0 5 937 315 0 0 0 chr17 46235323 46235358 -49037293 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 937 470 278 54 134 chr17 46236211 46236435 -49036216 - ID_B1 SINE B4 -17 207 2 5 937 195 145 0 42 chr17 46237067 46237139 -49035512 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 937 602 148 8 43 chr17 46237157 46237534 -49035117 + (CA)n Simple_repeat Simple_repeat 1 363 0 5 937 667 129 23 26 chr17 46237546 46237866 -49034785 + (CA)n Simple_repeat Simple_repeat 1 318 0 5 937 376 252 87 0 chr17 46237934 46238037 -49034614 + B3A SINE B2 1 112 -86 5 937 226 373 51 0 chr17 46238831 46238952 -49033699 - MIRb SINE MIR -120 148 10 5 937 208 246 86 14 chr17 46239084 46239154 -49033497 - MIR SINE MIR -68 140 66 5 937 688 223 73 63 chr17 46239332 46239538 -49033113 + B3 SINE B2 2 209 -7 5 937 544 221 88 12 chr17 46239605 46239739 -49032912 + B3A SINE B2 48 189 -27 5 937 797 238 23 127 chr17 46240057 46240278 -49032373 + MTEb LTR MaLR 1 198 -181 5 937 486 0 0 0 chr17 46240280 46240334 -49032317 + (TC)n Simple_repeat Simple_repeat 1 54 0 5 937 244 188 0 0 chr17 46240334 46240382 -49032269 - B1_Mur4 SINE Alu -64 86 39 5 937 354 274 31 10 chr17 46240611 46240707 -49031944 + PB1D7 SINE Alu 18 115 -5 5 937 459 218 58 43 chr17 46240723 46240862 -49031789 + ID_B1 SINE B4 76 216 -8 5 937 202 154 19 19 chr17 46240863 46240885 -49031766 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 5 937 844 169 0 53 chr17 46240885 46241035 -49031616 + B1_Mur3 SINE Alu 3 144 -5 5 937 202 154 19 19 chr17 46241035 46241065 -49031586 + (TTAA)n Simple_repeat Simple_repeat 4 34 0 5 937 737 253 25 110 chr17 46242182 46242382 -49030269 + B3A SINE B2 2 184 -32 5 937 1718 16 5 0 chr17 46242610 46242802 -49029849 + B2_Mm1t SINE B2 1 193 0 5 937 603 238 0 23 chr17 46242816 46242945 -49029706 + B1_Mur1 SINE Alu 3 128 -21 5 937 309 140 0 0 chr17 46242947 46243004 -49029647 + (GGA)n Simple_repeat Simple_repeat 2 58 0 5 937 299 279 81 15 chr17 46243274 46243383 -49029268 + B1F SINE Alu 1 142 -7 5 937 747 155 0 0 chr17 46243521 46243637 -49029014 + B1_Mur4 SINE Alu 35 150 0 5 937 1335 93 5 11 chr17 46243642 46243827 -49028824 + B2_Mm2 SINE B2 1 184 -11 5 937 555 280 48 0 chr17 46243861 46243986 -49028665 + B1F2 SINE Alu 13 143 -6 5 937 438 289 19 0 chr17 46244245 46244349 -49028302 - RSINE1 SINE B4 -17 148 43 5 937 459 191 71 22 chr17 46244380 46244543 -49028108 + MTD LTR MaLR 218 419 0 5 937 319 204 181 11 chr17 46244593 46244687 -49027964 + L1ME3A LINE L1 4964 5073 -1073 5 937 1102 81 0 57 chr17 46244707 46244864 -49027787 + B1_Mus1 SINE Alu 1 148 0 5 937 294 95 0 0 chr17 46244864 46244906 -49027745 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 5 937 1117 209 24 5 chr17 46244921 46245133 -49027518 + B3 SINE B2 1 216 0 5 937 706 291 89 35 chr17 46245166 46245572 -49027079 + L1ME3A LINE L1 5297 5724 -449 5 937 359 332 108 0 chr17 46245638 46245861 -49026790 + L1ME3A LINE L1 5924 6170 -3 5 937 293 151 28 17 chr17 46245928 46245979 -49026672 + B1_Mur2 SINE Alu 71 131 -16 5 937 288 77 0 0 chr17 46245979 46246018 -49026633 + (CTAG)n Simple_repeat Simple_repeat 2 40 0 5 937 259 172 143 86 chr17 46246018 46246036 -49026615 + B1_Mus2 SINE Alu 132 144 -3 5 937 207 100 0 0 chr17 46246308 46246338 -49026313 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 5 937 539 192 50 39 chr17 46246783 46246962 -49025689 + RLTR42 LTR ERVK 1 239 0 5 937 228 242 82 71 chr17 46246998 46247096 -49025555 - RLTR42 LTR ERVK 0 239 141 5 937 1238 73 6 0 chr17 46247381 46247545 -49025106 + B2_Mm1t SINE B2 1 165 -28 5 937 268 90 349 160 chr17 46247561 46247667 -49024984 + B2_Mm2 SINE B2 70 195 0 5 937 1120 77 28 0 chr17 46248976 46249119 -49023532 + B1_Mus2 SINE Alu 1 147 0 5 937 186 43 0 0 chr17 46249119 46249142 -49023509 + (A)n Simple_repeat Simple_repeat 1 23 0 5 937 697 140 86 79 chr17 46249155 46249295 -49023356 + B1_Mus1 SINE Alu 1 141 -7 5 937 260 111 15 45 chr17 46249296 46249362 -49023289 + GA-rich Low_complexity Low_complexity 3 66 0 5 937 279 0 0 0 chr17 46249419 46249450 -49023201 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 937 610 173 96 0 chr17 46249644 46249748 -49022903 - B1_Mur1 SINE Alu 0 149 36 5 937 444 303 84 84 chr17 46250239 46250394 -49022257 + MER20 DNA MER1_type 4 158 -61 5 937 204 40 0 0 chr17 46250415 46250440 -49022211 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 937 826 131 29 21 chr17 46250461 46250601 -49022050 - B1_Mus1 SINE Alu -1 147 7 5 937 670 236 0 16 chr17 46250604 46250733 -49021918 + B1_Mur1 SINE Alu 11 137 -12 5 937 194 292 15 15 chr17 46253812 46253878 -49018773 - L2b LINE L2 -1 3374 3309 5 937 303 228 0 0 chr17 46254419 46254476 -49018175 - PB1D7 SINE Alu -19 101 45 5 937 275 0 29 0 chr17 46254535 46254570 -49018081 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 5 937 509 254 106 15 chr17 46255826 46255958 -49016693 + ID_B1 SINE B4 81 224 0 5 937 645 175 8 34 chr17 46256023 46256141 -49016510 - PB1D9 SINE Alu 0 120 6 5 937 207 309 68 58 chr17 46256719 46256822 -49015829 + MIRb SINE MIR 159 262 -6 5 937 370 204 0 0 chr17 46257255 46257329 -49015322 + B1_Mur1 SINE Alu 60 133 -16 5 937 289 238 73 24 chr17 46257485 46257567 -49015084 - MER20 DNA MER1_type -91 128 43 5 937 283 224 38 71 chr17 46257716 46257899 -49014752 + (TATG)n Simple_repeat Simple_repeat 4 180 0 5 937 323 225 66 36 chr17 46257921 46258087 -49014564 + (TATG)n Simple_repeat Simple_repeat 4 174 0 5 937 327 238 55 40 chr17 46258109 46258616 -49014035 + (TATG)n Simple_repeat Simple_repeat 1 514 0 5 937 323 333 19 0 chr17 46258626 46258788 -49013863 + (TATATG)n Simple_repeat Simple_repeat 6 170 0 5 937 384 295 195 49 chr17 46258788 46258952 -49013699 - B3A SINE B2 -10 188 1 5 937 1099 132 179 0 chr17 46259087 46259277 -49013374 + URR1B DNA MER1_type 1 224 -1 5 937 462 273 62 35 chr17 46259321 46259465 -49013186 - B1F SINE Alu 0 149 2 5 937 246 237 184 82 chr17 46259465 46259497 -49013154 - MT2B LTR ERVL -440 161 115 5 937 845 239 50 5 chr17 46259957 46260155 -49012496 + B3 SINE B2 2 208 -8 6 937 590 333 21 5 chr17 46260156 46260346 -49012305 + B3 SINE B2 1 193 -23 6 937 382 259 168 28 chr17 46260611 46260754 -49011897 - RSINE1 SINE B4 0 165 3 6 937 352 333 58 13 chr17 46260768 46260923 -49011728 - MIR SINE MIR -89 173 12 6 937 423 0 0 0 chr17 46268134 46268181 -49004470 + (TC)n Simple_repeat Simple_repeat 2 48 0 6 937 270 0 0 0 chr17 46268181 46268210 -49004441 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 938 641 243 123 10 chr17 46268583 46268738 -49003913 + B3 SINE B2 55 211 -5 6 938 1596 32 11 0 chr17 46268740 46268925 -49003726 + B2_Mm1a SINE B2 2 188 -5 6 938 966 159 14 0 chr17 46270342 46270480 -49002171 + B1_Mur4 SINE Alu 2 141 -9 6 938 198 0 0 0 chr17 46270482 46270504 -49002147 + (TAA)n Simple_repeat Simple_repeat 1 22 0 6 938 455 167 14 0 chr17 46270504 46270576 -49002075 - ID_B1 SINE B4 -20 204 132 6 938 231 254 0 15 chr17 46270667 46270735 -49001916 + L1MA8 LINE L1 6039 6105 -186 6 938 1179 123 0 0 chr17 46270960 46271204 -49001447 + (CA)n Simple_repeat Simple_repeat 1 244 0 6 938 716 214 27 14 chr17 46271269 46271416 -49001235 + RSINE1 SINE B4 9 157 -8 6 938 987 85 0 0 chr17 46271483 46271612 -49001039 + B1_Mus1 SINE Alu 20 148 0 6 938 198 167 0 0 chr17 46272376 46272412 -49000239 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 6 938 257 194 71 43 chr17 46272429 46272499 -49000152 - PB1D9 SINE Alu -3 117 46 6 938 219 36 0 0 chr17 46272567 46272595 -49000056 + (TAA)n Simple_repeat Simple_repeat 1 28 0 6 938 1277 114 17 0 chr17 46272648 46272824 -48999827 + B2_Mm2 SINE B2 1 179 -16 6 938 1122 56 0 20 chr17 46272853 46272867 -48999784 - B1_Mus1 SINE Alu 0 148 137 6 938 284 0 0 27 chr17 46272867 46272904 -48999747 + (TTTTG)n Simple_repeat Simple_repeat 3 38 0 6 938 1122 56 0 20 chr17 46272904 46273035 -48999616 - B1_Mus1 SINE Alu -12 136 6 6 938 1454 138 9 26 chr17 46273067 46273297 -48999354 + URR1A DNA MER1_type 1 226 0 6 938 551 238 0 53 chr17 46273310 46273443 -48999208 + MTD LTR MaLR 88 213 -206 6 938 201 121 0 0 chr17 46273454 46273487 -48999164 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 938 219 88 0 0 chr17 46273963 46273997 -48998654 + (TC)n Simple_repeat Simple_repeat 1 34 0 6 938 310 222 86 0 chr17 46274134 46274296 -48998355 + (CCTA)n Simple_repeat Simple_repeat 1 176 0 6 938 280 216 75 35 chr17 46274310 46274483 -48998168 + (CCTA)n Simple_repeat Simple_repeat 1 180 0 6 938 757 247 71 11 chr17 46274493 46274677 -48997974 + ID_B1 SINE B4 29 223 -1 6 938 213 351 0 49 chr17 46274677 46274758 -48997893 + ID2 SINE ID 4 80 -3 6 938 235 261 0 0 chr17 46274766 46274812 -48997839 + ID_B1 SINE B4 145 190 -34 6 938 278 295 72 124 chr17 46274808 46274863 -48997788 + B4 SINE B4 32 204 -88 6 938 282 273 81 108 chr17 46274863 46275011 -48997640 + B1F2 SINE Alu 3 146 -3 6 938 459 211 222 0 chr17 46275019 46275190 -48997461 + B3 SINE B2 1 209 -7 6 938 321 241 0 67 chr17 46275209 46275298 -48997353 + RSINE1 SINE B4 83 165 0 6 938 23 68 0 0 chr17 46275299 46275343 -48997308 + AT_rich Low_complexity Low_complexity 1 44 0 6 938 225 0 0 0 chr17 46275685 46275710 -48996941 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 938 276 343 75 6 chr17 46275921 46276094 -48996557 + L1MC LINE L1 5607 5791 -2091 6 938 765 223 105 35 chr17 46276218 46276418 -48996233 - B3 SINE B2 0 216 3 6 938 229 26 26 26 chr17 46276740 46276779 -48995872 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 938 1163 70 0 0 chr17 46276782 46276924 -48995727 - B1_Mus1 SINE Alu -6 142 1 6 938 555 257 60 7 chr17 46277061 46277210 -48995441 + RSINE1 SINE B4 3 159 -6 6 938 873 94 0 0 chr17 46277411 46277528 -48995123 + B1_Mus1 SINE Alu 27 143 -5 6 938 289 243 68 86 chr17 46277425 46277542 -48995109 + RLTR25B LTR ERVK 441 555 -473 6 938 1172 185 25 0 chr17 46277898 46278098 -48994553 - B3 SINE B2 -10 206 2 6 938 200 182 0 0 chr17 46278302 46278335 -48994316 + C-rich Low_complexity Low_complexity 3 35 0 6 938 234 215 0 0 chr17 46278381 46278460 -48994191 + (CA)n Simple_repeat Simple_repeat 2 80 0 6 938 1096 192 27 5 chr17 46278846 46279034 -48993617 + B3 SINE B2 1 192 -24 6 938 440 186 65 89 chr17 46279037 46279161 -48993490 + ORR1A4 LTR MaLR 3 123 -206 6 938 442 208 108 9 chr17 46279301 46279435 -48993216 - PB1D7 SINE Alu -1 148 5 6 938 410 195 0 84 chr17 46279931 46279959 -48992692 - ID_B1 SINE B4 -4 220 196 6 938 594 228 108 94 chr17 46279959 46280162 -48992489 - B3 SINE B2 -10 206 1 6 938 410 195 0 84 chr17 46280162 46280228 -48992423 - ID_B1 SINE B4 -29 195 134 6 938 496 217 61 68 chr17 46281621 46281769 -48990882 + B1_Mur1 SINE Alu 3 149 0 6 938 1141 157 65 32 chr17 46282594 46282811 -48989840 - URR1B DNA MER1_type 0 225 2 6 938 751 199 35 7 chr17 46282900 46283042 -48989609 - B1_Mur4 SINE Alu -3 147 2 6 938 203 0 0 36 chr17 46283084 46283112 -48989539 + (TGGGGG)n Simple_repeat Simple_repeat 2 28 0 6 938 377 241 71 0 chr17 46283195 46283307 -48989344 + Lx8 LINE L1 7353 7472 -1 6 938 495 0 0 0 chr17 46283585 46283640 -48989011 + (TATG)n Simple_repeat Simple_repeat 4 58 0 6 938 1116 82 0 20 chr17 46283640 46283782 -48988869 - B1_Mus1 SINE Alu -7 141 2 6 938 400 331 65 0 chr17 46284101 46284255 -48988396 + ID_B1 SINE B4 8 171 -53 6 938 469 325 6 30 chr17 46285477 46285645 -48987006 + RSINE1 SINE B4 2 165 0 6 938 373 263 50 10 chr17 46285792 46285892 -48986759 + B4A SINE B4 1 104 -188 6 938 288 0 0 0 chr17 46286191 46286223 -48986428 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 938 186 71 0 0 chr17 46286389 46286417 -48986234 + (TCTCTG)n Simple_repeat Simple_repeat 4 31 0 6 938 1211 48 0 7 chr17 46286428 46286575 -48986076 - B1_Mus2 SINE Alu -1 146 1 6 938 255 266 10 96 chr17 46286584 46286678 -48985973 - B1_Mur2 SINE Alu -7 142 56 6 938 8506 29 2 15 chr17 46286678 46286871 -48985780 + L1Md_F2 LINE L1 5588 5780 -802 6 938 1187 62 0 0 chr17 46286871 46287017 -48985634 - B1_Mus2 SINE Alu 0 147 2 6 938 8506 29 2 15 chr17 46287017 46287828 -48984823 + L1Md_F2 LINE L1 5781 6579 -3 6 938 210 282 0 0 chr17 46287840 46287925 -48984726 + A-rich Low_complexity Low_complexity 1 85 0 6 938 327 227 133 0 chr17 46287925 46288000 -48984651 - B1_Mus2 SINE Alu -61 86 2 6 938 222 179 97 69 chr17 46288245 46288317 -48984334 + ID_B1 SINE B4 86 159 -65 6 938 720 104 0 36 chr17 46288336 46288446 -48984205 + B1_Mur4 SINE Alu 35 140 -10 6 938 319 301 8 16 chr17 46288642 46288767 -48983884 + GA-rich Low_complexity Low_complexity 3 126 0 6 938 248 318 52 52 chr17 46288786 46288902 -48983749 + PB1D10 SINE Alu 2 117 0 6 938 1177 54 0 39 chr17 46288905 46289059 -48983592 + B1_Mus1 SINE Alu 1 148 0 6 938 1250 96 0 22 chr17 46289085 46289267 -48983384 + B2_Mm1a SINE B2 4 181 -12 6 938 1036 55 0 0 chr17 46289253 46289381 -48983270 + B1_Mm SINE Alu 15 142 -5 6 938 356 156 11 8 chr17 46289434 46289500 -48983151 + B2_Mm2 SINE B2 47 113 -103 6 938 1413 132 0 108 chr17 46290681 46290960 -48981691 + RLTR23 LTR ERV1 179 427 -3 6 938 1201 56 0 0 chr17 46290971 46291115 -48981536 - B1_Mm SINE Alu 0 147 4 6 938 290 236 40 79 chr17 46291127 46291154 -48981497 + MT2B LTR ERVL 143 239 -362 6 938 416 135 122 0 chr17 46291154 46291228 -48981423 + B1_Mus1 SINE Alu 1 83 -65 6 938 364 250 42 0 chr17 46291350 46291446 -48981205 + RSINE1 SINE B4 6 105 -60 6 938 389 232 16 97 chr17 46291504 46291519 -48981132 + MT2B LTR ERVL 151 155 -446 6 938 832 154 35 7 chr17 46291519 46291663 -48980988 + B1_Mur3 SINE Alu 2 149 0 6 938 1049 79 7 0 chr17 46291726 46291866 -48980785 - B1_Mus1 SINE Alu -6 142 2 6 938 366 219 0 20 chr17 46292005 46292103 -48980548 - RCHARR1 DNA MER1_type -125 849 754 6 938 1279 92 53 11 chr17 46292199 46292386 -48980265 + B2_Mm2 SINE B2 1 195 0 6 938 493 287 14 7 chr17 46292459 46292603 -48980048 - ID_B1 SINE B4 -2 222 78 6 938 544 252 0 24 chr17 46292614 46292740 -48979911 - ID_B1 SINE B4 0 224 102 6 938 410 139 14 27 chr17 46292724 46292798 -48979853 - B2_Mm2 SINE B2 -122 73 1 6 938 189 281 45 30 chr17 46292816 46292882 -48979769 - L2 LINE L2 -723 2696 2630 6 938 793 148 22 0 chr17 46292900 46293035 -48979616 + B1_Mus1 SINE Alu 11 148 0 6 938 1305 111 11 0 chr17 46293132 46293321 -48979330 + B2_Mm1t SINE B2 2 192 -1 6 938 2382 80 12 3 chr17 46293532 46293856 -48978795 - ORR1A2 LTR MaLR 0 327 1 6 938 440 289 72 0 chr17 46294053 46294219 -48978432 + B3A SINE B2 3 180 -18 6 938 578 257 7 0 chr17 46294246 46294390 -48978261 + B1_Mus2 SINE Alu 2 146 -1 6 938 300 257 25 5 chr17 46294409 46294509 -48978142 + ID4_ SINE ID 1 104 -48 6 938 371 236 0 0 chr17 46294611 46294683 -48977968 + PB1D10 SINE Alu 38 109 -8 6 938 1008 153 0 43 chr17 46294783 46294947 -48977704 + B2_Mm2 SINE B2 1 157 -38 6 938 301 135 44 11 chr17 46294962 46295052 -48977599 + (TA)n Simple_repeat Simple_repeat 2 94 0 6 938 276 151 20 70 chr17 46295066 46295166 -48977485 + (TATAA)n Simple_repeat Simple_repeat 1 95 0 6 938 220 189 40 0 chr17 46295141 46295215 -48977436 + (TAAA)n Simple_repeat Simple_repeat 4 80 0 7 938 1193 48 0 20 chr17 46295217 46295365 -48977286 + B1_Mus2 SINE Alu 2 146 -1 7 938 287 221 45 23 chr17 46295412 46295500 -48977151 + BC1_Mm scRNA scRNA 15 104 -48 7 938 522 267 222 0 chr17 46295504 46295639 -48977012 + RSINE1 SINE B4 1 165 0 7 938 279 0 0 0 chr17 46295654 46295685 -48976966 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 938 825 230 10 64 chr17 46295685 46295882 -48976769 - B3A SINE B2 -11 187 1 7 938 405 0 0 0 chr17 46295920 46295965 -48976686 + (TA)n Simple_repeat Simple_repeat 1 45 0 7 938 210 336 67 0 chr17 46296925 46297029 -48975622 - MIR3 SINE MIR -93 115 5 7 938 228 268 14 0 chr17 46298018 46298089 -48974562 + (CGG)n Simple_repeat Simple_repeat 1 72 0 7 938 949 144 211 6 chr17 46298915 46299090 -48973561 + B3 SINE B2 5 215 -1 7 938 791 126 8 0 chr17 46299105 46299224 -48973427 + B1_Mus1 SINE Alu 28 147 -1 7 938 338 233 139 49 chr17 46299294 46299416 -48973235 - MER5A DNA MER1_type -56 133 1 7 938 24 32 0 0 chr17 46300649 46300680 -48971971 + AT_rich Low_complexity Low_complexity 1 31 0 7 938 848 133 15 0 chr17 46300681 46300816 -48971835 - B1_Mus1 SINE Alu 0 148 12 7 938 742 253 0 34 chr17 46300848 46301024 -48971627 - B3A SINE B2 -28 170 1 7 938 198 150 0 0 chr17 46306249 46306289 -48966362 + (TA)n Simple_repeat Simple_repeat 2 41 0 7 938 213 245 93 19 chr17 46306766 46306820 -48965831 - ID SINE ID -162 62 5 7 938 380 291 144 52 chr17 46306927 46307101 -48965550 - ID_B1 SINE B4 -34 190 1 7 938 1168 99 54 16 chr17 46307223 46307407 -48965244 - B2_Mm2 SINE B2 -3 192 2 7 938 443 189 245 0 chr17 46307411 46307517 -48965134 + B1_Mur4 SINE Alu 15 146 -4 7 938 277 310 237 18 chr17 46307774 46307802 -48964849 - ID_B1 SINE B4 -64 228 161 7 938 308 328 11 26 chr17 46307802 46307911 -48964740 - PB1D9 SINE Alu -6 114 1 7 938 277 310 237 18 chr17 46307911 46307970 -48964681 - ID_B1 SINE B4 -64 160 9 7 938 257 280 39 88 chr17 46307969 46307981 -48964670 - B1F1 SINE Alu -40 109 13 7 938 290 225 233 11 chr17 46307981 46308071 -48964580 - ID_B1 SINE B4 -21 203 94 7 938 184 171 0 89 chr17 46308356 46308401 -48964250 - L3 LINE CR1 -4413 76 36 7 938 890 35 95 0 chr17 46308530 46308646 -48964005 + B1_Mus2 SINE Alu 21 147 0 7 938 198 0 0 0 chr17 46308646 46308668 -48963983 + (A)n Simple_repeat Simple_repeat 1 22 0 7 938 261 233 141 64 chr17 46308847 46308925 -48963726 - BC1_Mm scRNA scRNA -68 84 1 7 938 523 209 43 9 chr17 46310333 46310449 -48962202 - PB1D9 SINE Alu 0 120 1 7 938 201 147 0 0 chr17 46310726 46310760 -48961891 + (T)n Simple_repeat Simple_repeat 1 34 0 7 938 1232 48 0 0 chr17 46310774 46310921 -48961730 - B1_Mus2 SINE Alu 0 147 1 7 938 1405 86 37 0 chr17 46310922 46311109 -48961542 - B2_Mm2 SINE B2 -1 194 1 7 938 402 255 104 0 chr17 46311332 46311438 -48961213 + PB1D10 SINE Alu 1 117 0 7 938 721 165 113 0 chr17 46311694 46311827 -48960824 - B1_Mur4 SINE Alu 0 150 3 7 938 1682 31 0 0 chr17 46311892 46312084 -48960567 + B2_Mm1t SINE B2 2 193 0 7 938 605 255 13 27 chr17 46312353 46312502 -48960149 + B1_Mur1 SINE Alu 1 147 -2 7 938 24 0 0 0 chr17 46312533 46312557 -48960094 + AT_rich Low_complexity Low_complexity 1 24 0 7 938 745 154 130 8 chr17 46312632 46312763 -48959888 + B1_Mur4 SINE Alu 2 148 -2 7 938 198 0 0 0 chr17 46312767 46312789 -48959862 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 7 938 211 302 0 0 chr17 46312855 46312908 -48959743 + BC1_Mm scRNA scRNA 39 91 -61 7 938 388 245 276 6 chr17 46312959 46313118 -48959533 + ID_B1 SINE B4 1 202 -22 7 938 1297 104 0 81 chr17 46313148 46313188 -48959463 + B2_Mm1a SINE B2 2 34 -159 7 938 2928 34 33 8 chr17 46313188 46313547 -48959104 + L1Md_F2 LINE L1 6215 6582 0 7 938 1297 104 0 81 chr17 46313547 46313715 -48958936 + B2_Mm1a SINE B2 35 193 0 7 938 2036 124 19 28 chr17 46314093 46314417 -48958234 + ORR1A4 LTR MaLR 1 321 -8 7 938 1236 54 0 0 chr17 46314462 46314609 -48958042 + B1_Mus2 SINE Alu 1 147 0 7 938 587 153 80 0 chr17 46314674 46314811 -48957840 - RMER17B LTR ERVK -495 463 316 7 938 717 149 239 36 chr17 46314811 46314978 -48957673 - B3 SINE B2 0 216 16 7 938 262 314 74 37 chr17 46315088 46315250 -48957401 - B4A SINE B4 0 292 125 7 938 265 213 0 32 chr17 46315278 46315341 -48957310 + L1MB7 LINE L1 5343 5403 -775 7 938 434 239 56 4 chr17 46315472 46315616 -48957035 + B3A SINE B2 4 160 -33 7 938 1781 196 38 33 chr17 46315647 46316069 -48956582 + RLTR20B3 LTR ERVK 93 516 -61 7 938 501 225 271 5 chr17 46316130 46316318 -48956333 + L1MB7 LINE L1 5525 5762 -416 7 938 319 216 39 14 chr17 46316532 46316613 -48956038 + L1MB7 LINE L1 5980 6060 -124 7 938 695 221 14 28 chr17 46316625 46316769 -48955882 + B1_Mur1 SINE Alu 1 142 -7 7 938 769 207 7 33 chr17 46316794 46316944 -48955707 + B1_Mus1 SINE Alu 1 146 -2 7 938 332 199 27 0 chr17 46316966 46317048 -48955603 + L1MB7 LINE L1 6059 6144 -40 7 938 449 165 1 63 chr17 46317145 46317248 -48955403 + PB1D9 SINE Alu 36 128 -21 7 938 757 284 0 15 chr17 46317306 46317503 -48955148 + B3A SINE B2 1 194 -4 7 938 543 246 14 36 chr17 46317524 46317663 -48954988 + RSINE1 SINE B4 2 137 -28 7 938 345 273 34 11 chr17 46317936 46318025 -48954626 - ID_B1 SINE B4 -133 91 1 7 938 250 277 59 24 chr17 46318075 46318160 -48954491 + B1F SINE Alu 1 88 -61 7 938 528 168 159 0 chr17 46318181 46318294 -48954357 - B1_Mur2 SINE Alu 0 149 19 7 938 332 252 79 20 chr17 46318616 46318717 -48953934 + PB1D10 SINE Alu 1 107 -10 7 938 387 265 187 32 chr17 46318752 46318998 -48953653 + B4A SINE B4 9 292 0 7 938 1234 75 46 0 chr17 46319345 46319518 -48953133 + B2_Mm2 SINE B2 2 182 -13 7 938 387 264 35 0 chr17 46319919 46320006 -48952645 - B1F SINE Alu -54 95 6 7 938 195 42 0 0 chr17 46320013 46320037 -48952614 + (TTTTG)n Simple_repeat Simple_repeat 5 28 0 7 938 611 163 21 110 chr17 46320037 46320182 -48952469 - B1_Mur3 SINE Alu -14 135 4 7 938 577 262 32 51 chr17 46320253 46320410 -48952241 + ID_B1 SINE B4 1 154 -70 7 938 275 258 0 70 chr17 46320365 46320436 -48952215 + PB1D10 SINE Alu 29 94 -23 7 938 1676 36 0 0 chr17 46320514 46320706 -48951945 - B2_Mm1a SINE B2 0 193 2 7 938 387 0 0 0 chr17 46320829 46320872 -48951779 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 938 235 301 41 0 chr17 46320919 46320992 -48951659 + PB1D10 SINE Alu 41 116 -1 7 938 303 333 0 0 chr17 46321000 46321078 -48951573 + ID4_ SINE ID 4 81 -2 7 938 348 339 27 0 chr17 46321257 46321369 -48951282 + ID_B1 SINE B4 86 200 -24 7 938 420 233 67 115 chr17 46321416 46321581 -48951070 + MT2B LTR ERVL 126 282 -319 7 938 564 236 26 39 chr17 46321446 46321460 -48951191 + ID_B1 SINE B4 73 221 0 7 938 787 190 15 0 chr17 46321460 46321597 -48951054 + B1_Mus1 SINE Alu 10 148 0 7 938 21 36 0 0 chr17 46321600 46321628 -48951023 + AT_rich Low_complexity Low_complexity 1 28 0 7 938 1632 21 0 25 chr17 46322109 46322305 -48950346 - B2_Mm1a SINE B2 -2 191 1 7 938 1423 55 22 11 chr17 46322392 46322574 -48950077 - B2_Mm2 SINE B2 -11 184 1 7 938 718 178 25 0 chr17 46322609 46322727 -48949924 + B1_Mur4 SINE Alu 25 145 -5 7 938 219 231 0 0 chr17 46322740 46322805 -48949846 + A-rich Low_complexity Low_complexity 1 65 0 7 938 306 311 92 43 chr17 46323101 46323242 -48949409 + B1F1 SINE Alu 1 148 -1 7 938 248 311 18 88 chr17 46323283 46323396 -48949255 + PB1D7 SINE Alu 5 109 -11 7 938 517 211 11 0 chr17 46323430 46323525 -48949126 - B1_Mur3 SINE Alu -21 128 33 7 938 247 203 30 45 chr17 46323465 46323532 -48949119 - 4.5SRNA scRNA scRNA -7 87 22 7 938 1175 82 0 0 chr17 46323552 46323699 -48948952 + B1_Mus2 SINE Alu 1 147 0 7 938 766 211 20 0 chr17 46323716 46323863 -48948788 - B1_Mur4 SINE Alu 0 150 1 7 938 290 26 26 0 chr17 46323941 46323980 -48948671 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 938 449 287 61 104 chr17 46323988 46324268 -48948383 - B4A SINE B4 -23 269 2 7 938 348 297 8 71 chr17 46324270 46324397 -48948254 - PB1D9 SINE Alu -1 119 1 7 938 273 282 0 71 chr17 46324397 46324426 -48948225 - B4 SINE B4 -207 85 63 7 938 628 216 48 0 chr17 46324420 46324545 -48948106 - B1_Mur2 SINE Alu -17 132 2 7 938 411 288 22 50 chr17 46324545 46324559 -48948092 - ID_B1 SINE B4 -17 207 73 7 938 1124 102 0 0 chr17 46324593 46324740 -48947911 - B1_Mus1 SINE Alu 0 148 2 7 938 1175 70 0 0 chr17 46325273 46325416 -48947235 + B1_Mus1 SINE Alu 1 143 -5 7 938 183 100 0 0 chr17 46325419 46325449 -48947202 + (A)n Simple_repeat Simple_repeat 1 30 0 7 938 1487 208 194 82 chr17 46325697 46326162 -48946489 + MT2A LTR ERVL 1 517 -16 7 938 1098 196 27 9 chr17 46326162 46326384 -48946267 - URR1A DNA MER1_type 0 226 1 7 938 490 170 0 74 chr17 46326387 46326495 -48946156 - B1_Mur2 SINE Alu -10 139 40 7 938 234 266 0 0 chr17 46326506 46326634 -48946017 + CT-rich Low_complexity Low_complexity 2 129 0 7 938 378 148 0 0 chr17 46326640 46326694 -48945957 - PB1D9 SINE Alu -66 54 1 7 938 408 349 35 66 chr17 46327055 46327313 -48945338 + B4A SINE B4 43 292 0 8 938 219 235 0 19 chr17 46327378 46327430 -48945221 + B1F2 SINE Alu 7 57 -92 8 938 1081 122 0 0 chr17 46327763 46327911 -48944740 - B1_Mus1 SINE Alu 0 148 1 8 938 21 0 0 0 chr17 46327914 46327935 -48944716 + AT_rich Low_complexity Low_complexity 1 21 0 8 938 912 156 7 33 chr17 46328148 46328300 -48944351 + B1_Mur3 SINE Alu 2 149 0 8 938 421 261 0 118 chr17 46328369 46328382 -48944269 - MT2B LTR ERVL -323 278 241 8 938 571 195 17 34 chr17 46328382 46328499 -48944152 - B1_Mus1 SINE Alu -33 115 1 8 938 421 261 0 118 chr17 46328499 46328530 -48944121 - MT2B LTR ERVL -323 240 137 8 938 386 239 26 34 chr17 46328549 46328666 -48943985 + PB1D10 SINE Alu 2 117 0 8 938 729 113 42 42 chr17 46328669 46328789 -48943862 + PB1D9 SINE Alu 1 120 0 8 938 621 183 30 9 chr17 46329598 46329750 -48942901 + B3 SINE B2 25 186 -9 8 938 269 337 122 0 chr17 46329779 46329877 -48942774 - RSINE1 SINE B4 -30 135 26 8 938 1327 194 99 38 chr17 46329880 46330222 -48942429 + ORR1D1 LTR MaLR 1 363 -11 8 938 793 233 46 46 chr17 46330571 46330787 -48941864 + B3 SINE B2 1 216 0 8 938 1034 224 10 0 chr17 46332003 46332199 -48940452 + MTD LTR MaLR 7 204 -215 8 938 32 43 0 0 chr17 46332203 46332249 -48940402 + AT_rich Low_complexity Low_complexity 1 46 0 8 938 1187 75 0 0 chr17 46332366 46332513 -48940138 + B1_Mus1 SINE Alu 2 148 0 8 938 1874 167 78 24 chr17 46332570 46332944 -48939707 + ORR1B1 LTR MaLR 1 394 0 8 938 1159 62 14 0 chr17 46332966 46333110 -48939541 - B1_Mus2 SINE Alu 0 147 2 8 938 544 256 0 31 chr17 46333240 46333369 -48939282 - ID_B1 SINE B4 -1 223 99 8 938 726 161 12 144 chr17 46333525 46333692 -48938959 - B1_Mur3 SINE Alu 0 149 5 8 938 453 283 102 42 chr17 46333950 46334274 -48938377 + RMER20A LTR ERVK 95 464 -163 8 938 410 258 16 25 chr17 46334235 46334354 -48938297 - B3A SINE B2 -75 120 2 8 938 388 223 446 0 chr17 46334386 46334498 -48938153 - RSINE1 SINE B4 -1 164 3 8 938 305 236 0 0 chr17 46334603 46334658 -48937993 - RSINE1 SINE B4 -43 122 68 8 938 694 146 0 96 chr17 46334707 46334843 -48937808 + B1_Mus2 SINE Alu 24 146 -1 8 938 574 257 101 7 chr17 46334888 46335037 -48937614 - B3A SINE B2 -28 170 8 8 938 1059 147 21 11 chr17 46335056 46335242 -48937409 - B2_Mm2 SINE B2 -7 188 1 8 938 297 240 13 0 chr17 46335457 46335532 -48937119 - ID4_ SINE ID -6 77 2 8 938 690 167 220 36 chr17 46335861 46336029 -48936622 + B3 SINE B2 16 214 -2 8 938 868 282 112 22 chr17 46336040 46336308 -48936343 + B4A SINE B4 1 292 0 8 938 455 226 183 0 chr17 46336550 46336643 -48936008 + PB1D9 SINE Alu 3 112 -8 8 938 396 236 22 11 chr17 46336788 46336878 -48935773 - PB1D9 SINE Alu -29 91 1 8 938 301 276 44 71 chr17 46336891 46336933 -48935718 + L1M5 LINE L1 5338 5378 -786 8 938 1406 193 162 18 chr17 46336933 46337260 -48935391 - ORR1D1 LTR MaLR 0 374 1 8 938 301 276 44 71 chr17 46337260 46337330 -48935321 + L1M5 LINE L1 5379 5447 -717 8 938 419 232 52 21 chr17 46337786 46337883 -48934768 - PB1D9 SINE Alu -11 109 10 8 938 422 293 10 2 chr17 46337934 46338052 -48934599 + PB1D10 SINE Alu 5 126 -21 8 938 335 271 107 0 chr17 46338052 46338174 -48934477 - L1MC4a LINE L1 -609 7273 7139 8 938 327 255 76 68 chr17 46338185 46338303 -48934348 - ID_B1 SINE B4 0 224 106 8 938 191 235 0 0 chr17 46338311 46338345 -48934306 - MER5B DNA MER1_type -125 53 20 8 938 464 180 19 52 chr17 46338963 46339081 -48933570 - PB1D7 SINE Alu 0 120 1 8 938 226 259 54 86 chr17 46341228 46341321 -48931330 + B4A SINE B4 108 197 -95 8 938 507 250 67 15 chr17 46341921 46342055 -48930596 + B1F SINE Alu 1 141 -8 8 938 382 248 204 0 chr17 46342233 46342377 -48930274 - B3A SINE B2 -30 186 1 8 938 383 275 212 30 chr17 46342381 46342546 -48930105 - B3A SINE B2 -3 195 1 8 938 845 19 9 0 chr17 46342583 46342688 -48929963 - B1_Mus2 SINE Alu -1 146 41 8 938 330 145 88 50 chr17 46342624 46342704 -48929947 - RLTR25B LTR ERVK -519 509 427 8 938 420 88 0 15 chr17 46342731 46342796 -48929855 - B1_Mus2 SINE Alu 0 120 59 8 938 456 79 0 0 chr17 46343255 46343318 -48929333 - B1_Mur3 SINE Alu -86 63 1 8 938 614 208 16 8 chr17 46344130 46344256 -48928395 - RSINE1 SINE B4 -28 137 11 8 938 386 119 0 0 chr17 46344291 46344350 -48928301 - ID_B1 SINE B4 0 224 166 8 938 457 256 34 17 chr17 46344378 46344497 -48928154 - RSINE1 SINE B4 -38 127 7 8 938 410 311 95 0 chr17 46344501 46344649 -48928002 - ID_B1 SINE B4 -62 162 1 8 938 603 243 21 21 chr17 46345641 46345784 -48926867 + B1_Mur1 SINE Alu 7 149 0 8 938 813 266 19 47 chr17 46345813 46346026 -48926625 + B3 SINE B2 9 215 -1 8 938 402 285 191 6 chr17 46346266 46346439 -48926212 + B3 SINE B2 10 214 -2 8 938 795 188 0 46 chr17 46346462 46346613 -48926038 + B1_Mur3 SINE Alu 6 149 0 8 938 411 119 0 0 chr17 46346837 46346904 -48925747 + (TG)n Simple_repeat Simple_repeat 2 68 0 8 938 1021 243 5 19 chr17 46347070 46347276 -48925375 + B3 SINE B2 5 207 -9 8 938 330 283 105 32 chr17 46347430 46347492 -48925159 + ID SINE ID 9 79 -145 8 938 278 292 0 40 chr17 46347492 46347567 -48925084 + PB1 SINE Alu 1 72 -55 8 938 603 206 69 12 chr17 46347604 46347778 -48924873 - B3 SINE B2 -7 188 2 8 938 652 250 15 0 chr17 46347838 46347974 -48924677 - RSINE1 SINE B4 -16 149 12 8 938 2362 102 16 0 chr17 46348052 46348374 -48924277 - ORR1A2 LTR MaLR 0 327 1 8 938 1123 71 0 0 chr17 46348527 46348667 -48923984 + B1_Mus1 SINE Alu 1 140 -8 8 938 365 194 15 0 chr17 46349141 46349208 -48923443 - B4A SINE B4 -217 75 8 8 938 252 86 0 0 chr17 46349235 46349270 -48923381 + (TGG)n Simple_repeat Simple_repeat 3 37 0 8 938 967 162 0 7 chr17 46349272 46349421 -48923230 - B1_Mur2 SINE Alu -1 148 1 8 938 456 299 26 13 chr17 46349646 46349802 -48922849 + RSINE1 SINE B4 4 161 -4 8 938 756 207 30 0 chr17 46349836 46349971 -48922680 + B1_Mur1 SINE Alu 5 143 -6 8 938 215 250 53 18 chr17 46350302 46350359 -48922292 - PB1D10 SINE Alu -11 106 48 8 938 252 246 18 0 chr17 46350677 46350734 -48921917 - B1F1 SINE Alu 0 149 92 8 938 441 234 44 66 chr17 46350919 46351056 -48921595 + B1F1 SINE Alu 12 145 -4 8 938 572 259 45 45 chr17 46351773 46351975 -48920676 - ORR1E LTR MaLR -157 202 1 8 938 3378 26 21 3 chr17 46352211 46352600 -48920051 - MTA_Mm LTR MaLR 0 396 1 8 938 209 30 61 0 chr17 46352794 46352827 -48919824 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 8 938 552 15 0 0 chr17 46352839 46352904 -48919747 + (TG)n Simple_repeat Simple_repeat 1 65 0 8 938 462 297 123 25 chr17 46352904 46353088 -48919563 - B4A SINE B4 -48 244 32 8 938 1257 110 38 21 chr17 46353260 46353446 -48919205 - B2_Mm2 SINE B2 -6 189 1 8 938 594 186 153 0 chr17 46353912 46354036 -48918615 - B1_Mur2 SINE Alu 0 149 7 8 938 21 71 0 0 chr17 46354042 46354084 -48918567 + AT_rich Low_complexity Low_complexity 1 42 0 8 938 329 207 0 0 chr17 46354127 46354185 -48918466 - RSINE1 SINE B4 -43 122 65 8 938 382 194 15 0 chr17 46354184 46354251 -48918400 - B1_Mur1 SINE Alu -9 140 73 8 938 568 150 60 0 chr17 46354304 46354404 -48918247 - B1_Mur4 SINE Alu -1 149 44 8 938 576 0 0 0 chr17 46354814 46354878 -48917773 + (TTCC)n Simple_repeat Simple_repeat 3 66 0 8 938 600 234 55 0 chr17 46354878 46355006 -48917645 - B1_Mur2 SINE Alu -12 137 3 8 938 1259 34 0 7 chr17 46355114 46355261 -48917390 - B1_Mm SINE Alu 0 147 2 8 938 244 275 110 0 chr17 46355269 46355360 -48917291 - PB1D7 SINE Alu -7 113 13 8 938 193 276 35 0 chr17 46355518 46355576 -48917075 + L2 LINE L2 2548 2607 -812 8 938 301 292 30 91 chr17 46355718 46355850 -48916801 + RSINE1 SINE B4 2 125 -40 8 938 213 196 0 0 chr17 46356905 46356951 -48915700 + C-rich Low_complexity Low_complexity 1 46 0 8 938 304 121 61 0 chr17 46357136 46357202 -48915449 + CT-rich Low_complexity Low_complexity 6 75 0 8 938 447 301 34 40 chr17 46357257 46357406 -48915245 - B1F2 SINE Alu 0 149 2 8 938 441 0 0 0 chr17 46359068 46359117 -48913534 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 938 355 261 114 0 chr17 46359818 46359944 -48912707 - MIRc SINE MIR -122 146 5 8 938 492 290 70 26 chr17 46360907 46361112 -48911539 + B3A SINE B2 2 202 -14 8 938 207 0 0 0 chr17 46361112 46361135 -48911516 + (CA)n Simple_repeat Simple_repeat 2 24 0 8 938 484 320 40 72 chr17 46361135 46361151 -48911500 + B3 SINE B2 203 216 0 8 938 694 79 0 0 chr17 46361161 46361250 -48911401 - B1_Mus1 SINE Alu -58 90 2 8 938 407 289 21 0 chr17 46361351 46361448 -48911203 - PB1D7 SINE Alu -2 118 20 8 938 373 322 26 26 chr17 46361580 46361733 -48910918 + ID_B1 SINE B4 70 222 -2 8 938 280 265 29 0 chr17 46361756 46361824 -48910827 + ID4 SINE ID 8 77 -6 8 938 208 315 38 129 chr17 46362233 46362419 -48910232 - L2b LINE L2 -19 3407 3239 9 938 821 227 102 15 chr17 46362622 46362819 -48909832 + B3 SINE B2 1 214 -2 9 938 343 280 18 91 chr17 46363439 46363549 -48909102 - PB1D10 SINE Alu -9 108 7 9 938 1038 165 115 0 chr17 46364057 46364257 -48908394 - URR1A DNA MER1_type 0 226 4 9 938 733 160 0 40 chr17 46365314 46365438 -48907213 + PB1D9 SINE Alu 2 120 0 9 938 358 242 10 21 chr17 46365490 46365587 -48907064 - ID_B1 SINE B4 -6 218 123 9 938 836 219 15 59 chr17 46365760 46365964 -48906687 + B3 SINE B2 2 196 -20 9 938 691 211 62 34 chr17 46365999 46366176 -48906475 + B3A SINE B2 1 182 -16 9 938 844 106 24 0 chr17 46367532 46367655 -48904996 - B1_Mus1 SINE Alu -7 141 16 9 938 274 167 75 15 chr17 46367673 46367740 -48904911 - ID4_ SINE ID -11 72 2 9 938 304 278 117 16 chr17 46367982 46368110 -48904541 + MER5A1 DNA MER1_type 22 162 -4 9 938 230 320 108 27 chr17 46368175 46368361 -48904290 - L1ME3A LINE L1 -236 5937 5737 9 938 485 302 39 56 chr17 46368678 46368857 -48903794 - B4A SINE B4 -13 279 104 9 938 224 143 17 35 chr17 46368936 46368994 -48903657 + (TTTG)n Simple_repeat Simple_repeat 2 58 0 9 938 4832 76 2 0 chr17 46369069 46369673 -48902978 - L1_Mus1 LINE L1 0 6567 5963 9 938 948 37 0 0 chr17 46369673 46369780 -48902871 - U6 snRNA snRNA 0 107 1 9 938 240 225 296 0 chr17 46370017 46370088 -48902563 + B1_Mur1 SINE Alu 16 107 -42 9 938 839 199 205 0 chr17 46370096 46370267 -48902384 - B3 SINE B2 -10 206 1 9 938 226 114 5 137 chr17 46371735 46371939 -48900712 + (GTGTG)n Simple_repeat Simple_repeat 1 177 0 9 938 221 119 0 141 chr17 46371958 46372164 -48900487 + (GTGTG)n Simple_repeat Simple_repeat 1 177 0 9 938 240 108 5 137 chr17 46372250 46372454 -48900197 + (GTGTG)n Simple_repeat Simple_repeat 1 177 0 9 938 219 116 0 134 chr17 46372445 46372624 -48900027 + (CAGTG)n Simple_repeat Simple_repeat 5 159 0 9 938 281 330 40 20 chr17 46373231 46373330 -48899321 - B1F SINE Alu -39 110 10 9 938 420 306 24 0 chr17 46373422 46373546 -48899105 - PB1 SINE Alu 0 127 1 9 938 529 306 169 4 chr17 46374013 46374249 -48898402 + B4A SINE B4 3 277 -15 9 938 243 0 0 0 chr17 46374923 46374950 -48897701 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 9 938 1012 101 7 7 chr17 46374950 46375089 -48897562 - B1_Mus1 SINE Alu -9 139 1 9 938 201 82 0 155 chr17 46377343 46377371 -48895280 + T-rich Low_complexity Low_complexity 28 49 0 9 938 1171 48 7 14 chr17 46377371 46377519 -48895132 - B1_Mm SINE Alu 0 147 1 9 938 201 82 0 155 chr17 46377519 46377548 -48895103 + T-rich Low_complexity Low_complexity 1 27 0 9 938 449 51 0 0 chr17 46377548 46377607 -48895044 - B1_Mm SINE Alu 0 147 89 9 938 358 153 122 27 chr17 46377611 46377685 -48894966 - B1F1 SINE Alu -1 148 68 9 938 227 218 62 37 chr17 46377883 46377964 -48894687 - ID4_ SINE ID 0 83 1 9 938 235 300 52 52 chr17 46377976 46378092 -48894559 - B1F1 SINE Alu -6 143 28 9 938 436 250 45 62 chr17 46382084 46382128 -48890523 - MT2B LTR ERVL -264 337 166 9 938 613 185 69 8 chr17 46382128 46382259 -48890392 - B1_Mur3 SINE Alu -9 140 2 9 938 221 288 12 36 chr17 46382278 46382361 -48890290 + B4 SINE B4 3 83 -209 9 938 648 97 18 72 chr17 46382801 46382912 -48889739 - PB1D9 SINE Alu 0 120 16 9 938 922 133 29 7 chr17 46383305 46383441 -48889210 - B1_Mus2 SINE Alu -4 143 5 9 938 503 216 256 19 chr17 46383805 46383961 -48888690 + B3 SINE B2 5 197 -19 9 938 582 189 93 48 chr17 46384192 46384339 -48888312 + B1_Mus2 SINE Alu 1 144 -5 9 938 198 347 134 18 chr17 46384377 46384594 -48888057 + L2c LINE L2 3098 3339 -48 9 938 377 0 42 0 chr17 46387308 46387356 -48885295 + (TCTCC)n Simple_repeat Simple_repeat 1 50 0 9 938 226 267 198 0 chr17 46389259 46389345 -48883306 + B1_Mur4 SINE Alu 22 124 -26 9 938 354 291 155 7 chr17 46389340 46389482 -48883169 + B3A SINE B2 36 198 0 9 938 215 271 206 10 chr17 46389490 46389587 -48883064 + B3A SINE B2 83 198 0 9 938 233 288 163 64 chr17 46389592 46389733 -48882918 + B3A SINE B2 2 156 -42 9 938 357 261 195 25 chr17 46389818 46389936 -48882715 - B1_Mur2 SINE Alu -11 138 1 9 938 913 129 29 7 chr17 46389945 46390085 -48882566 - B1_Mus2 SINE Alu 0 147 5 9 938 22 0 0 0 chr17 46390095 46390117 -48882534 + AT_rich Low_complexity Low_complexity 1 22 0 9 938 853 65 151 16 chr17 46390312 46390438 -48882213 + B1_Mus1 SINE Alu 1 143 -5 9 938 428 270 32 26 chr17 46391037 46391193 -48881458 + C-rich Low_complexity Low_complexity 3 159 0 9 938 226 346 38 0 chr17 46391125 46391284 -48881367 + (CCCCAG)n Simple_repeat Simple_repeat 6 170 0 9 938 585 0 0 0 chr17 46392745 46392810 -48879841 + (TC)n Simple_repeat Simple_repeat 2 66 0 9 938 487 17 0 0 chr17 46392810 46392870 -48879781 - B1_Mur4 SINE Alu -11 139 80 9 938 839 176 142 6 chr17 46393373 46393556 -48879095 - B3 SINE B2 -2 214 7 9 938 188 321 62 54 chr17 46393876 46393988 -48878663 - L4 LINE RTE -575 1454 1342 9 938 553 186 60 34 chr17 46394669 46394786 -48877865 + PB1D9 SINE Alu 1 120 0 9 939 240 264 164 23 chr17 46400810 46400938 -48871713 + RSINE1 SINE B4 3 148 -17 9 939 249 250 124 11 chr17 46401369 46401458 -48871193 + B1_Mur1 SINE Alu 50 148 -1 9 939 232 26 154 0 chr17 46401514 46401553 -48871098 + PB1D10 SINE Alu 73 117 0 9 939 433 263 94 70 chr17 46402484 46402697 -48869954 + MER20 DNA MER1_type 1 218 -1 9 939 326 179 0 0 chr17 46402719 46402775 -48869876 + RSINE1 SINE B4 2 57 -108 9 939 867 136 0 0 chr17 46405554 46405872 -48866779 + (CA)n Simple_repeat Simple_repeat 1 318 0 9 939 993 184 194 129 chr17 46408245 46408595 -48864056 + ORR1D1 LTR MaLR 1 373 -1 9 939 1109 65 0 7 chr17 46409520 46409660 -48862991 - B1_Mus2 SINE Alu -8 139 1 9 939 214 267 121 55 chr17 46409905 46409996 -48862655 + PB1D10 SINE Alu 21 117 0 9 939 220 317 23 47 chr17 46409996 46410082 -48862569 + ID_B1 SINE B4 8 91 -133 9 939 1012 209 55 41 chr17 46410195 46410415 -48862236 - URR1B DNA MER1_type -2 223 1 9 939 435 242 21 0 chr17 46410421 46410436 -48862215 + B4 SINE B4 71 87 -205 9 939 620 85 8 0 chr17 46410436 46410533 -48862118 + B1_Mus2 SINE Alu 1 103 -17 9 939 1758 195 62 55 chr17 46410986 46411175 -48861476 + MTC LTR MaLR 1 192 -229 9 939 1139 69 28 0 chr17 46411175 46411319 -48861332 + B1_Mus1 SINE Alu 1 148 0 9 939 1758 195 62 55 chr17 46411319 46411547 -48861104 + MTC LTR MaLR 193 421 0 9 939 265 312 41 10 chr17 46412231 46412328 -48860323 + PB1D10 SINE Alu 2 101 -16 9 939 551 276 0 7 chr17 46412550 46412685 -48859966 + MTD LTR MaLR 25 158 -261 9 939 487 243 35 14 chr17 46412715 46412857 -48859794 + MTD LTR MaLR 272 416 -3 9 939 1227 35 14 0 chr17 46412857 46413002 -48859649 + B1_Mus2 SINE Alu 1 147 0 9 939 302 79 0 60 chr17 46413002 46413069 -48859582 + (GAAA)n Simple_repeat Simple_repeat 4 66 0 9 939 251 352 57 0 chr17 46413175 46413280 -48859371 - PB1D10 SINE Alu -6 111 1 9 939 243 382 21 56 chr17 46413355 46413499 -48859152 - L2c LINE L2 -1 3386 3248 9 939 205 51 51 0 chr17 46413586 46413625 -48859026 + (CAAAA)n Simple_repeat Simple_repeat 5 45 0 9 939 1305 20 0 0 chr17 46413744 46413891 -48858760 + B1_Mus1 SINE Alu 2 148 0 9 939 225 0 0 0 chr17 46413891 46413916 -48858735 + (A)n Simple_repeat Simple_repeat 1 25 0 9 939 243 250 167 0 chr17 46413934 46414030 -48858621 + PB1D9 SINE Alu 2 113 -7 9 939 394 257 78 17 chr17 46415640 46415755 -48856896 + B3A SINE B2 1 122 -76 9 939 680 173 3 0 chr17 46415815 46415935 -48856716 - B1_Mur1 SINE Alu -25 124 2 9 939 421 320 32 47 chr17 46416016 46416206 -48856445 + MIR SINE MIR 33 219 -43 9 939 274 257 67 0 chr17 46416419 46416524 -48856127 - MIR SINE MIR -69 193 82 9 939 1216 61 0 0 chr17 46416524 46416672 -48855979 + B1_Mus1 SINE Alu 1 148 0 9 939 484 331 37 6 chr17 46416756 46416917 -48855734 - ID_B1 SINE B4 0 224 59 9 939 539 218 40 0 chr17 46416965 46417066 -48855585 - PB1D10 SINE Alu -12 105 1 9 939 577 248 16 0 chr17 46417388 46417509 -48855142 + PB1 SINE Alu 3 125 -2 9 939 436 276 26 58 chr17 46417543 46417697 -48854954 + B1F SINE Alu 1 149 0 9 939 368 238 210 58 chr17 46417707 46417845 -48854806 + B3A SINE B2 1 159 -36 9 939 1097 197 20 0 chr17 46417865 46418068 -48854583 + B3 SINE B2 8 214 -2 9 939 364 204 96 57 chr17 46418068 46418194 -48854457 + B1F2 SINE Alu 23 148 -1 9 939 338 197 0 27 chr17 46418930 46419003 -48853648 + B1_Mur1 SINE Alu 78 148 -1 9 939 238 247 80 27 chr17 46420292 46420367 -48852284 - B1F2 SINE Alu -37 112 34 9 939 267 189 0 19 chr17 46420586 46420640 -48852011 - B1F SINE Alu -32 117 65 9 939 861 232 15 44 chr17 46420791 46420994 -48851657 - B3A SINE B2 -1 197 1 9 939 297 0 0 0 chr17 46421245 46421278 -48851373 + (CA)n Simple_repeat Simple_repeat 1 33 0 9 939 246 312 117 51 chr17 46421282 46421478 -48851173 + L2a LINE L2 3216 3424 -2 9 939 509 301 0 0 chr17 46422136 46422272 -48850379 - B1_Mm SINE Alu -11 136 1 1 939 188 35 35 0 chr17 46422364 46422393 -48850258 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1 939 688 242 0 26 chr17 46422655 46422808 -48849843 + B1_Mur4 SINE Alu 1 149 -1 1 939 313 267 56 0 chr17 46423007 46423097 -48849554 + ID_B1 SINE B4 122 216 -8 1 939 373 300 44 26 chr17 46423428 46423541 -48849110 + B1F SINE Alu 18 132 -17 1 939 236 312 52 10 chr17 46423607 46423704 -48848947 + PB1 SINE Alu 1 101 -26 1 939 258 32 0 0 chr17 46423784 46423815 -48848836 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 1 939 181 0 0 65 chr17 46424030 46424061 -48848590 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 1 939 450 0 0 0 chr17 46424619 46424669 -48847982 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 939 488 235 148 0 chr17 46425213 46425328 -48847323 + ID_B1 SINE B4 84 215 -9 1 939 247 313 0 0 chr17 46425328 46425395 -48847256 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 939 804 264 32 36 chr17 46425413 46425633 -48847018 + ID_B1 SINE B4 4 222 -2 1 939 1125 62 13 27 chr17 46425764 46425913 -48846738 + B1_Mus2 SINE Alu 1 147 0 1 939 369 230 46 0 chr17 46426315 46426402 -48846249 - U6 snRNA snRNA -16 91 1 1 939 451 295 55 50 chr17 46426596 46426724 -48845927 + MIR SINE MIR 65 197 -65 1 939 1071 256 105 61 chr17 46426724 46427086 -48845565 - MTE2a LTR MaLR -1 378 1 1 939 451 295 55 50 chr17 46427086 46427139 -48845512 + MIR SINE MIR 198 247 -15 1 939 272 203 16 33 chr17 46427171 46427232 -48845419 - MTE2b LTR MaLR -8 371 312 1 939 523 113 227 0 chr17 46427232 46427329 -48845322 + PB1D9 SINE Alu 1 119 -1 1 939 369 109 0 0 chr17 46427332 46427387 -48845264 + (GGAA)n Simple_repeat Simple_repeat 3 57 0 1 939 426 266 9 27 chr17 46427387 46427499 -48845152 - MTE2b LTR MaLR -54 325 216 1 939 1531 208 152 129 chr17 46427499 46428019 -48844632 - MT2A LTR ERVL -1 532 1 1 939 704 197 33 0 chr17 46428019 46428171 -48844480 - MERVL_2A-int LTR ERVL 0 5761 5605 1 939 922 162 56 0 chr17 46428156 46428353 -48844298 - MERVL_2A-int LTR ERVL -71 5690 5483 1 939 865 149 18 9 chr17 46428353 46428532 -48844119 - B3 SINE B2 -10 185 1 1 939 210 259 0 0 chr17 46428553 46428611 -48844040 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 1 939 634 293 6 0 chr17 46428630 46428787 -48843864 - RSINE1 SINE B4 -5 160 3 1 939 634 310 0 0 chr17 46428918 46429076 -48843575 + RSINE1 SINE B4 8 165 0 1 939 581 259 35 0 chr17 46429213 46429356 -48843295 - B1F2 SINE Alu -1 148 1 1 939 332 268 72 6 chr17 46429415 46429568 -48843083 + B4A SINE B4 1 164 -128 1 939 820 187 4 31 chr17 46429639 46429904 -48842747 + (CATATA)n Simple_repeat Simple_repeat 1 257 0 1 939 809 226 143 23 chr17 46429938 46430155 -48842496 + B4 SINE B4 2 244 -48 1 939 436 205 0 12 chr17 46430186 46430349 -48842302 + GA-rich Low_complexity Low_complexity 2 162 0 1 939 254 302 112 39 chr17 46430350 46430529 -48842122 - L2 LINE L2 -832 2587 2396 1 939 957 131 0 0 chr17 46430664 46430817 -48841834 + (TTCC)n Simple_repeat Simple_repeat 1 153 0 1 939 1305 83 0 0 chr17 46430818 46430998 -48841653 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 1 939 790 193 6 6 chr17 46430998 46431175 -48841476 + CT-rich Low_complexity Low_complexity 3 179 0 1 939 459 244 40 24 chr17 46431191 46431317 -48841334 - B1F SINE Alu -21 128 1 1 939 1645 229 47 67 chr17 46431355 46431893 -48840758 - RLTR11A2 LTR ERVK 0 527 1 1 939 743 188 0 50 chr17 46431973 46432113 -48840538 - B1_Mur1 SINE Alu -13 136 4 1 939 426 301 169 9 chr17 46432117 46432348 -48840303 - MLT1H LTR MaLR -279 270 3 1 939 257 211 92 0 chr17 46432428 46432504 -48840147 - L2 LINE L2 -2627 792 710 1 939 252 189 0 127 chr17 46432743 46432822 -48839829 + L2a LINE L2 3354 3422 -4 1 939 440 279 107 15 chr17 46433047 46433178 -48839473 + ID_B1 SINE B4 82 224 0 1 939 459 0 0 0 chr17 46433446 46433497 -48839154 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 939 283 265 14 35 chr17 46434655 46434796 -48837855 + (CGGGG)n Simple_repeat Simple_repeat 2 139 0 1 939 22 35 0 0 chr17 46434940 46434969 -48837682 + GC_rich Low_complexity Low_complexity 1 29 0 1 939 195 69 0 0 chr17 46436069 46436098 -48836553 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 939 228 67 0 0 chr17 46436120 46436150 -48836501 + (TCCCC)n Simple_repeat Simple_repeat 1 30 0 1 939 291 233 19 76 chr17 46436321 46436479 -48836172 + G-rich Low_complexity Low_complexity 1 149 0 1 939 981 128 0 14 chr17 46436646 46436789 -48835862 + B1_Mus1 SINE Alu 2 142 -6 1 939 1505 70 16 0 chr17 46437064 46437249 -48835402 + B2_Mm2 SINE B2 1 188 -7 1 939 307 202 9 9 chr17 46437460 46437565 -48835086 + (CA)n Simple_repeat Simple_repeat 2 106 0 1 939 445 204 7 7 chr17 46437584 46437727 -48834924 + (CA)n Simple_repeat Simple_repeat 2 144 0 1 939 225 196 0 0 chr17 46437746 46437797 -48834854 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 939 207 0 0 0 chr17 46437843 46437866 -48834785 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 939 762 155 131 40 chr17 46438183 46438358 -48834293 - B2_Mm2 SINE B2 -4 191 1 1 939 188 236 0 89 chr17 46438360 46438439 -48834212 - MIR SINE MIR -112 150 79 1 939 220 290 85 61 chr17 46439116 46439281 -48833370 - MIRb SINE MIR -21 247 79 1 939 783 175 0 40 chr17 46444943 46445092 -48827559 + B1_Mur2 SINE Alu 1 143 -6 1 939 1197 34 0 0 chr17 46445101 46445248 -48827403 + B1_Mus2 SINE Alu 1 147 0 1 939 201 94 0 0 chr17 46445248 46445280 -48827371 + (A)n Simple_repeat Simple_repeat 1 32 0 1 939 253 236 102 12 chr17 46445627 46445732 -48826919 + MIRb SINE MIR 93 198 -64 1 939 328 196 44 26 chr17 46445761 46445865 -48826786 + PB1D7 SINE Alu 1 98 -49 1 939 570 208 100 0 chr17 46445996 46446126 -48826525 - B1F SINE Alu -5 144 2 1 939 1236 83 22 0 chr17 46446194 46446375 -48826276 + B2_Mm1t SINE B2 1 185 -8 1 939 679 124 18 9 chr17 46446401 46446515 -48826136 + B1_Mur2 SINE Alu 33 147 -2 1 939 285 267 64 37 chr17 46447721 46447830 -48824821 + PB1D10 SINE Alu 1 112 -5 1 939 1037 202 56 0 chr17 46447874 46448072 -48824579 + B3 SINE B2 1 209 -7 1 939 389 216 164 0 chr17 46449650 46449766 -48822885 + B1F SINE Alu 3 137 -12 1 939 1311 75 11 0 chr17 46449899 46450085 -48822566 - B2_Mm1t SINE B2 -4 189 2 1 939 723 210 213 11 chr17 46451429 46451712 -48820939 + ORR1D1 LTR MaLR 25 384 0 1 939 893 228 27 9 chr17 46452837 46453058 -48819593 + URR1B DNA MER1_type 1 225 0 1 939 807 239 78 5 chr17 46453107 46453313 -48819338 - ID_B1 SINE B4 -1 223 3 1 939 3105 34 8 5 chr17 46454032 46454419 -48818232 + RLTR10 LTR ERVK 1 388 -2 1 939 7792 40 7 21 chr17 46454421 46455433 -48817218 + RLTR10-int LTR ERVK 1 998 -989 1 939 327 256 62 39 chr17 46455497 46455627 -48817024 + RLTR10-int LTR ERVK 1462 1594 -5987 1 939 8685 16 0 2 chr17 46455709 46456708 -48815943 + RLTR10-int LTR ERVK 990 1986 -1 1 939 3105 34 8 5 chr17 46456708 46457095 -48815556 + RLTR10 LTR ERVK 1 388 -2 1 939 2957 17 0 3 chr17 46458141 46458488 -48814163 + ORR1A0 LTR MaLR 1 346 0 1 939 751 214 70 15 chr17 46458812 46459011 -48813640 + B3 SINE B2 2 211 -5 1 939 220 313 15 0 chr17 46459436 46459503 -48813148 - ID2 SINE ID -4 79 12 1 939 2340 152 3 3 chr17 46459902 46460285 -48812366 + MTC LTR MaLR 28 410 -11 1 939 930 116 7 7 chr17 46462470 46462617 -48810034 + B1_Mus1 SINE Alu 1 147 -1 1 939 846 229 27 16 chr17 46462625 46462811 -48809840 + B3A SINE B2 1 188 -10 1 939 640 150 0 66 chr17 46462814 46462935 -48809716 + B1_Mur1 SINE Alu 21 133 -16 1 939 351 284 39 0 chr17 46462973 46463075 -48809576 + PB1D10 SINE Alu 2 107 -10 1 939 244 320 126 0 chr17 46463109 46463212 -48809439 + PB1D10 SINE Alu 2 117 0 1 939 532 286 91 0 chr17 46463295 46463449 -48809202 + B3 SINE B2 39 206 -10 1 939 982 181 10 20 chr17 46463480 46463677 -48808974 + B3 SINE B2 1 195 -21 1 939 217 276 0 84 chr17 46463688 46463771 -48808880 + B4 SINE B4 81 156 -136 1 939 485 234 37 0 chr17 46463708 46463815 -48808836 + PB1D9 SINE Alu 10 120 0 1 939 668 163 0 30 chr17 46463967 46464100 -48808551 - B1_Mur4 SINE Alu 0 150 22 1 939 350 207 30 121 chr17 46464001 46464133 -48808518 - MT2B LTR ERVL -332 269 150 1 939 243 0 0 0 chr17 46464401 46464428 -48808223 + (T)n Simple_repeat Simple_repeat 1 27 0 1 939 234 116 0 0 chr17 46465602 46465645 -48807006 + (T)n Simple_repeat Simple_repeat 1 43 0 1 939 517 258 169 18 chr17 46465729 46465895 -48806756 + B3A SINE B2 5 195 -3 1 939 23 0 0 0 chr17 46466224 46466247 -48806404 + AT_rich Low_complexity Low_complexity 1 23 0 1 939 243 240 69 156 chr17 46466312 46466405 -48806246 + RLTR40 LTR ERVK 613 685 -132 1 939 1153 55 7 0 chr17 46466405 46466551 -48806100 - B1_Mus2 SINE Alu 0 147 1 1 939 243 240 69 156 chr17 46466551 46466630 -48806021 + RLTR40 LTR ERVK 686 770 -47 1 939 1163 62 0 0 chr17 46466734 46466879 -48805772 - B1_Mus2 SINE Alu -1 146 2 1 939 902 164 0 0 chr17 46466918 46467064 -48805587 + B1_Mus1 SINE Alu 1 146 -2 1 939 771 234 48 14 chr17 46467087 46467102 -48805549 - B3 SINE B2 0 216 202 1 939 420 20 0 0 chr17 46467102 46467151 -48805500 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 939 771 234 48 14 chr17 46467151 46467343 -48805308 - B3 SINE B2 -15 201 2 1 939 988 135 0 22 chr17 46467365 46467461 -48805190 + polypyrimidine Low_complexity Low_complexity 86 179 0 1 939 1170 117 0 0 chr17 46467461 46467640 -48805011 + (TCC)n Simple_repeat Simple_repeat 1 179 0 1 939 988 135 0 22 chr17 46467640 46467725 -48804926 + polypyrimidine Low_complexity Low_complexity 2 85 0 1 939 502 331 0 25 chr17 46467764 46467925 -48804726 + RSINE1 SINE B4 9 165 0 1 939 1023 143 10 21 chr17 46467973 46468166 -48804485 + B2_Mm2 SINE B2 1 191 -4 1 939 1338 84 16 5 chr17 46468167 46468359 -48804292 + B2_Mm2 SINE B2 1 194 -1 1 939 297 211 16 175 chr17 46468369 46468495 -48804156 + RMER20B LTR ERVK 426 531 -96 1 939 467 226 107 21 chr17 46468925 46469065 -48803586 - B4A SINE B4 -89 203 52 1 939 1935 151 22 60 chr17 46469113 46469514 -48803137 - RLTR20A LTR ERVK -155 386 1 1 939 546 268 92 5 chr17 46469611 46469795 -48802856 + B3 SINE B2 1 200 -16 1 939 2280 134 5 28 chr17 46470219 46470610 -48802041 + RLTR14 LTR ERV1 1 382 0 1 939 2050 107 24 59 chr17 46470809 46471147 -48801504 + ORR1A3 LTR MaLR 1 326 0 1 939 990 233 48 39 chr17 46471262 46471574 -48801077 - RLTR11A LTR ERVK 0 528 214 1 939 286 337 141 59 chr17 46471778 46472084 -48800567 - MER21B LTR ERV1 -125 738 408 1 939 998 117 0 2 chr17 46472084 46472482 -48800169 + (TG)n Simple_repeat Simple_repeat 1 397 0 1 939 550 316 62 10 chr17 46472582 46472790 -48799861 + ID_B1 SINE B4 6 224 0 1 939 239 222 0 22 chr17 46472792 46472884 -48799767 + GA-rich Low_complexity Low_complexity 4 93 0 1 939 220 291 70 0 chr17 46472918 46473004 -48799647 + PB1D10 SINE Alu 21 112 -5 1 939 219 345 21 43 chr17 46473035 46473129 -48799522 + RSINE1 SINE B4 60 151 -14 1 939 407 244 0 0 chr17 46473210 46473292 -48799359 - PB1D10 SINE Alu -1 116 35 1 939 491 0 17 0 chr17 46473525 46473584 -48799067 + (TATG)n Simple_repeat Simple_repeat 2 61 0 1 939 691 105 93 12 chr17 46473593 46473731 -48798920 - B2_Mm2 SINE B2 -57 159 2 1 939 230 235 44 0 chr17 46473732 46473800 -48798851 - L1M4 LINE L1 -745 5401 5331 1 939 31 0 0 0 chr17 46473809 46473840 -48798811 + AT_rich Low_complexity Low_complexity 1 31 0 1 939 394 256 174 0 chr17 46473840 46473961 -48798690 - B3A SINE B2 -56 142 1 1 939 420 283 0 0 chr17 46474117 46474216 -48798435 - B3A SINE B2 -79 119 21 1 939 342 143 0 0 chr17 46474213 46474269 -48798382 - B1_Mus1 SINE Alu -90 58 3 1 939 1159 55 0 0 chr17 46474315 46474460 -48798191 + B1_Mus1 SINE Alu 4 148 0 1 939 210 71 0 0 chr17 46474460 46474488 -48798163 + (A)n Simple_repeat Simple_repeat 1 28 0 1 939 243 0 0 0 chr17 46474593 46474620 -48798031 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1 939 2562 218 40 62 chr17 46474726 46475420 -48797231 - RMER1C Other Other -2 1340 662 1 939 223 222 28 0 chr17 46475462 46475534 -48797117 + A-rich Low_complexity Low_complexity 2 75 0 1 939 258 207 0 0 chr17 46475546 46475604 -48797047 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 939 1500 221 148 3 chr17 46475646 46476023 -48796628 - Lx7 LINE L1 -265 7431 7000 1 939 749 191 0 0 chr17 46476039 46476165 -48796486 - B1_Mus1 SINE Alu -1 147 22 1 939 643 243 77 0 chr17 46476165 46476334 -48796317 - Lx7 LINE L1 -683 7013 6832 1 939 450 53 0 0 chr17 46476461 46476518 -48796133 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 939 276 291 23 23 chr17 46476544 46476632 -48796019 - B3 SINE B2 -46 170 83 1 939 210 295 61 40 chr17 46476672 46476771 -48795880 - B2_Mm2 SINE B2 -94 101 1 1 939 255 242 0 29 chr17 46476814 46476882 -48795769 - ID4_ SINE ID -16 67 2 1 939 1115 29 0 0 chr17 46477216 46477355 -48795296 + B2_Mm2 SINE B2 1 139 -56 1 939 597 157 111 0 chr17 46477496 46477604 -48795047 - B1_Mus1 SINE Alu 0 148 29 1 939 33 0 0 0 chr17 46477753 46477786 -48794865 + AT_rich Low_complexity Low_complexity 1 33 0 1 939 751 222 91 15 chr17 46477798 46477995 -48794656 - B3 SINE B2 -3 213 2 1 939 1041 184 9 40 chr17 46478345 46478559 -48794092 + MTD LTR MaLR 2 208 -211 1 939 469 157 12 40 chr17 46478559 46478657 -48793994 + B1_Mur4 SINE Alu 1 87 -227 1 939 629 300 39 52 chr17 46478677 46479148 -48793503 + RLTR12B LTR ERVK 42 508 -60 1 939 294 208 0 40 chr17 46479230 46479305 -48793346 + B1_Mur4 SINE Alu 62 133 -17 1 939 548 209 281 0 chr17 46479295 46479455 -48793196 + MTD LTR MaLR 209 413 -6 1 939 635 215 27 20 chr17 46479817 46479964 -48792687 - B1_Mur1 SINE Alu 0 149 2 1 939 277 261 33 22 chr17 46480336 46480426 -48792225 + RMER15 LTR ERVL 408 498 -77 1 939 219 288 0 0 chr17 46480513 46480572 -48792079 - B1F SINE Alu -90 59 1 1 939 432 0 0 0 chr17 46480584 46480632 -48792019 + (TTCC)n Simple_repeat Simple_repeat 4 51 0 1 939 655 284 80 15 chr17 46480632 46480752 -48791899 - B4A SINE B4 -79 213 85 1 939 414 0 0 0 chr17 46480752 46480798 -48791853 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 939 655 284 80 15 chr17 46480798 46480877 -48791774 - B4A SINE B4 -208 84 1 1 939 1515 228 134 16 chr17 46481660 46482092 -48790559 + RLTR1 LTR ERV1 142 624 0 1 939 2982 234 101 9 chr17 46482092 46482977 -48789674 + MMERGLN-int LTR ERV1 1 967 -6589 1 939 2673 39 6 6 chr17 46482983 46483315 -48789336 + IAPEY3_LTR LTR ERVK 1 332 0 1 939 8974 121 15 6 chr17 46483315 46484682 -48787969 + IAPEY3-int LTR ERVK 1 1380 -6300 1 939 14625 109 1 3 chr17 46484678 46486791 -48785860 + IAPEy-int LTR ERVK 5405 7513 0 1 939 2342 55 71 0 chr17 46486791 46487099 -48785552 + IAPEY3_LTR LTR ERVK 1 330 -2 1 939 27488 250 24 21 chr17 46487100 46493668 -48778983 + MMERGLN-int LTR ERV1 969 7556 0 1 939 1443 199 144 24 chr17 46493760 46494171 -48778480 + RLTR1 LTR ERV1 163 622 -2 1 939 345 300 63 14 chr17 46494509 46494651 -48778000 + RSINE1 SINE B4 3 151 -14 1 939 302 98 20 0 chr17 46494657 46494708 -48777943 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 939 2633 122 76 32 chr17 46495221 46495719 -48776932 - RMER2 LTR ERV1 -4 563 44 1 939 1918 98 40 53 chr17 46495719 46495980 -48776671 + ORR1A2 LTR MaLR 1 269 -58 1 939 1060 56 21 0 chr17 46495980 46496123 -48776528 + B1_Mm SINE Alu 2 147 0 1 939 1918 98 40 53 chr17 46496123 46496184 -48776467 + ORR1A2 LTR MaLR 270 319 -8 1 939 382 42 0 0 chr17 46496188 46496236 -48776415 - RMER2 LTR ERV1 -519 48 1 1 939 1635 146 128 14 chr17 46496286 46496455 -48776196 + RMER17C LTR ERVK 1 180 -230 1 939 928 89 19 12 chr17 46496455 46496615 -48776036 + (TCTCC)n Simple_repeat Simple_repeat 4 164 0 1 939 456 51 0 0 chr17 46496620 46496679 -48775972 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 939 1635 146 128 14 chr17 46496679 46496871 -48775780 + RMER17C LTR ERVK 214 410 0 1 939 1108 68 0 13 chr17 46497019 46497169 -48775482 + B1_Mus1 SINE Alu 1 148 0 1 939 227 286 39 0 chr17 46497451 46497528 -48775123 - MTE2b LTR MaLR -1 378 299 1 939 1138 174 168 34 chr17 46497548 46497870 -48774781 - RMER6B LTR ERVK 0 461 97 1 939 1507 113 4 16 chr17 46497882 46498124 -48774527 - MYSERV6-int LTR ERVK -1195 7764 7526 1 939 2892 70 5 15 chr17 46498125 46498529 -48774122 - MTB LTR MaLR 0 400 1 1 939 3094 102 47 68 chr17 46498529 46498659 -48773992 - MTB-int LTR MaLR 0 1098 995 1 939 1125 68 0 13 chr17 46498659 46498808 -48773843 - B1_Mus2 SINE Alu 0 147 1 1 939 3094 102 47 68 chr17 46498808 46499254 -48773397 - MTB-int LTR MaLR -104 994 534 1 939 1911 122 22 22 chr17 46499254 46499268 -48773383 + RLTR10E LTR ERVK 1 11 -300 1 939 3554 35 9 0 chr17 46499268 46499700 -48772951 + RLTR10C LTR ERVK 1 436 0 1 939 1911 122 22 22 chr17 46499700 46499996 -48772655 + RLTR10E LTR ERVK 12 311 0 1 939 647 78 11 0 chr17 46500000 46500090 -48772561 + MMERVK10C-int LTR ERVK 5 95 -7486 1 939 292 100 0 0 chr17 46500091 46500131 -48772520 + RLTR27 LTR ERVK 232 271 -38 2 939 54032 87 6 13 chr17 46500132 46507324 -48765327 + MMERVK10C-int LTR ERVK 222 7298 -283 1 939 1994 129 33 3 chr17 46507452 46507754 -48764897 + RLTR10E LTR ERVK 1 311 0 3 939 1132 101 6 0 chr17 46507754 46507923 -48764728 - MT-int LTR MaLR -460 638 469 4 939 899 88 0 0 chr17 46507919 46508056 -48764595 - MT-int LTR MaLR -961 137 1 4 939 455 78 0 0 chr17 46508070 46508134 -48764517 + MTB LTR MaLR 335 398 -2 5 939 7657 124 75 95 chr17 46508134 46509155 -48763496 - MYSERV6-int LTR ERVK -1430 7529 6548 6 939 1567 43 22 0 chr17 46509155 46509339 -48763312 - B2_Mm1a SINE B2 -5 188 1 7 939 7657 124 75 95 chr17 46509339 46509527 -48763124 - MYSERV6-int LTR ERVK -2412 6547 6327 6 939 270 222 26 65 chr17 46509527 46509604 -48763047 - PB1D7 SINE Alu -46 74 1 8 939 7657 124 75 95 chr17 46509604 46509890 -48762761 - MYSERV6-int LTR ERVK -2412 6326 5989 6 939 1237 162 73 106 chr17 46509890 46510193 -48762458 - RMER19B LTR ERVK -609 293 1 9 939 11784 105 24 56 chr17 46510198 46510235 -48762416 - MYSERV6-int LTR ERVK -3953 5006 4971 6 939 1318 83 67 0 chr17 46510235 46510415 -48762236 - B2_Mm2 SINE B2 -2 193 2 1 939 11784 105 24 56 chr17 46510415 46511062 -48761589 - MYSERV6-int LTR ERVK -3989 4970 4369 6 939 1653 21 5 0 chr17 46511062 46511248 -48761403 - B2_Mm1t SINE B2 -6 187 1 1 939 11784 105 24 56 chr17 46511248 46511761 -48760890 - MYSERV6-int LTR ERVK -4591 4368 3861 6 939 1199 121 12 0 chr17 46511761 46511934 -48760717 + B2_Mm1a SINE B2 1 175 -18 1 939 11784 105 24 56 chr17 46511934 46512017 -48760634 - MYSERV6-int LTR ERVK -5099 3860 3797 6 939 1224 54 0 0 chr17 46512017 46512164 -48760487 - B1_Mus2 SINE Alu 0 147 1 1 939 11784 128 31 60 chr17 46512164 46512888 -48759763 - MYSERV6-int LTR ERVK -5163 3796 2785 6 939 999 52 2 2 chr17 46512888 46513027 -48759624 + B1_Mm SINE Alu 5 141 -6 1 939 198 0 0 0 chr17 46513029 46513051 -48759600 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 1 939 6629 246 68 84 chr17 46513051 46513757 -48758894 - MYSERV6-int LTR ERVK -3768 2782 2014 6 939 532 284 58 24 chr17 46513759 46514036 -48758615 - RLTR19 LTR ERVK 0 715 321 1 939 910 113 146 18 chr17 46514139 46514310 -48758341 - MYSERV6-int LTR ERVK -6665 2294 2102 1 939 1304 135 0 0 chr17 46514330 46514537 -48758114 - RMER6B LTR ERVK -254 207 1 1 939 488 248 16 8 chr17 46514828 46514954 -48757697 - MTEa-int LTR MaLR -30 1550 1424 1 939 1135 164 0 10 chr17 46514954 46515151 -48757500 + B3 SINE B2 1 195 -21 2 939 1011 325 111 83 chr17 46515148 46515986 -48756665 - MTEa-int LTR MaLR -143 1437 577 1 939 981 211 9 42 chr17 46516003 46516216 -48756435 - B3 SINE B2 -10 206 1 2 939 473 268 29 0 chr17 46516219 46516357 -48756294 - B1_Mur3 SINE Alu -5 144 3 2 939 1133 322 68 40 chr17 46516382 46516880 -48755771 - MTEa-int LTR MaLR -1068 512 1 1 939 238 287 74 65 chr17 46516894 46517002 -48755649 - MTEa LTR MaLR -15 364 256 1 939 616 239 0 23 chr17 46517170 46517303 -48755348 + B1F SINE Alu 6 135 -14 2 939 320 274 69 26 chr17 46517320 46517436 -48755215 + ID_B1 SINE B4 99 219 -5 2 939 1838 68 56 18 chr17 46518370 46518654 -48753997 - MTA_Mm LTR MaLR 0 396 102 2 939 483 128 441 0 chr17 46518715 46518817 -48753834 + B1_Mus1 SINE Alu 2 148 0 2 939 204 97 0 0 chr17 46518817 46518848 -48753803 + (A)n Simple_repeat Simple_repeat 1 31 0 2 939 468 252 17 9 chr17 46518871 46518987 -48753664 + ID_B1 SINE B4 91 207 -17 2 939 477 174 43 21 chr17 46519228 46519322 -48753329 + B1F2 SINE Alu 49 144 -5 2 939 844 164 14 7 chr17 46519499 46519646 -48753005 - B1_Mus1 SINE Alu 0 148 1 3 939 302 270 0 0 chr17 46519750 46519813 -48752838 - B3 SINE B2 -89 127 65 3 939 240 94 57 0 chr17 46519899 46519952 -48752699 - B3 SINE B2 0 216 161 3 939 234 220 33 11 chr17 46520658 46520750 -48751901 + (CGG)n Simple_repeat Simple_repeat 1 94 0 3 939 296 249 16 50 chr17 46520895 46521077 -48751574 + (CCG)n Simple_repeat Simple_repeat 1 176 0 3 939 250 294 99 18 chr17 46521812 46521923 -48750728 - MIRb SINE MIR -123 145 26 3 939 189 313 0 29 chr17 46522619 46522688 -48749963 - L2c LINE L2 -1 3386 3320 3 939 207 69 0 0 chr17 46523182 46523211 -48749440 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 939 687 99 123 8 chr17 46523393 46523515 -48749136 + B1_Mur4 SINE Alu 9 144 -6 3 939 273 163 0 0 chr17 46524144 46524193 -48748458 + CT-rich Low_complexity Low_complexity 2 50 0 3 939 711 143 60 0 chr17 46524193 46524326 -48748325 - B1_Mus1 SINE Alu 0 148 8 4 939 360 228 76 0 chr17 46524366 46524458 -48748193 - PB1D9 SINE Alu -21 99 1 4 939 388 256 16 49 chr17 46524452 46524575 -48748076 - PB1D9 SINE Alu -1 119 1 4 939 1156 69 7 0 chr17 46524602 46524747 -48747904 - B1_Mus2 SINE Alu 0 147 2 4 939 801 43 267 0 chr17 46525521 46525637 -48747014 - B1_Mus1 SINE Alu 0 148 2 4 939 493 138 50 0 chr17 46525811 46525891 -48746760 - B1_Mus2 SINE Alu -2 145 62 4 939 677 253 0 76 chr17 46526035 46526232 -48746419 + B3A SINE B2 2 183 -15 4 939 1241 221 79 87 chr17 46526348 46526764 -48745887 - MTC LTR MaLR -8 413 1 4 939 456 238 146 42 chr17 46526883 46527241 -48745410 - L1MB8 LINE L1 -81 6097 5679 4 939 1419 120 37 0 chr17 46527241 46527457 -48745194 - URR1A DNA MER1_type -2 224 1 4 939 221 329 14 27 chr17 46527468 46527577 -48745074 - ID2 SINE ID -46 106 3 5 939 24 0 0 0 chr17 46527756 46527780 -48744871 + AT_rich Low_complexity Low_complexity 1 24 0 5 939 571 172 8 49 chr17 46527831 46527953 -48744698 - B1_Mur2 SINE Alu -31 118 2 5 939 1048 116 7 0 chr17 46528002 46528149 -48744502 + B1_Mus1 SINE Alu 1 148 0 5 939 606 178 132 0 chr17 46528201 46528330 -48744321 - B1F2 SINE Alu -3 146 1 5 939 634 190 2 3 chr17 46528414 46528545 -48744106 - B1_Mus2 SINE Alu 0 149 20 5 939 468 269 132 37 chr17 46528595 46528784 -48743867 - B3 SINE B2 -9 207 1 5 939 363 72 345 0 chr17 46529283 46529393 -48743258 - B2_Mm2 SINE B2 -1 194 47 5 939 1279 92 29 0 chr17 46529459 46529633 -48743018 - B2_Mm1t SINE B2 -14 179 1 5 939 231 36 0 0 chr17 46529636 46529664 -48742987 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 5 939 774 78 209 0 chr17 46529680 46529795 -48742856 - B1_Mus1 SINE Alu -9 139 1 6 939 910 210 0 101 chr17 46529825 46529866 -48742785 + B3 SINE B2 1 39 -177 6 939 1341 120 16 0 chr17 46529866 46530058 -48742593 + B2_Mm2 SINE B2 1 195 0 6 939 910 210 0 101 chr17 46530058 46530244 -48742407 + B3 SINE B2 40 205 -11 6 939 250 311 136 12 chr17 46530310 46530479 -48742172 + B3A SINE B2 3 192 -6 6 939 24 77 0 0 chr17 46530481 46530533 -48742118 + AT_rich Low_complexity Low_complexity 1 52 0 6 117 773 188 25 25 chr17 46530553 46530740 -48741911 - B3 SINE B2 -6 187 1 6 940 451 279 25 0 chr17 46530748 46530870 -48741781 - B1F1 SINE Alu 0 149 25 6 940 186 143 0 0 chr17 46530888 46530923 -48741728 + (CCTG)n Simple_repeat Simple_repeat 2 36 0 6 940 563 297 25 25 chr17 46530983 46531145 -48741506 + RSINE1 SINE B4 4 165 0 6 940 605 204 6 109 chr17 46531178 46531343 -48741308 + B1_Mus1 SINE Alu 1 148 0 6 940 1366 72 0 58 chr17 46531901 46532107 -48740544 + B2_Mm2 SINE B2 2 195 0 7 940 1179 81 0 0 chr17 46532178 46532326 -48740325 - B1_Mus1 SINE Alu 0 148 1 7 940 445 282 0 0 chr17 46532348 46532451 -48740200 - MER5A1 DNA MER1_type -3 163 61 7 940 186 263 0 0 chr17 46532584 46532622 -48740029 - MER5A1 DNA MER1_type -103 63 26 7 940 910 223 0 69 chr17 46532713 46532930 -48739721 - B3 SINE B2 -13 203 2 7 940 278 218 171 11 chr17 46532954 46533042 -48739609 - PB1D9 SINE Alu -2 118 17 7 940 255 347 92 31 chr17 46533093 46533289 -48739362 - B3 SINE B2 -6 210 3 7 940 341 311 73 8 chr17 46534834 46534957 -48737694 + B1F1 SINE Alu 1 131 -18 7 940 230 178 0 62 chr17 46534976 46535024 -48737627 + RSINE1 SINE B4 41 85 -207 7 940 486 33 0 0 chr17 46535063 46535123 -48737528 + (TCCCC)n Simple_repeat Simple_repeat 4 63 0 7 940 752 122 26 0 chr17 46537486 46537601 -48735050 - B1_Mur4 SINE Alu -15 135 18 7 940 833 169 5 65 chr17 46537638 46537822 -48734829 - B2_Mm2 SINE B2 -19 176 4 8 940 566 230 29 15 chr17 46537975 46538112 -48734539 - B1_Mur1 SINE Alu -1 148 10 8 940 890 227 34 29 chr17 46538203 46538412 -48734239 - B3 SINE B2 -6 210 1 8 940 750 210 14 67 chr17 46538416 46538625 -48734026 - B3A SINE B2 0 198 1 8 940 275 253 121 0 chr17 46538955 46539038 -48733613 - PB1D10 SINE Alu -54 95 3 8 940 595 167 93 0 chr17 46539252 46539360 -48733291 - B1_Mur4 SINE Alu -32 118 1 8 940 299 276 72 52 chr17 46539363 46539516 -48733135 - RMER5 LTR ERV1 -271 263 108 8 940 226 252 152 45 chr17 46539866 46539978 -48732673 - L1MC4 LINE L1 -5 8037 7914 8 940 832 171 14 7 chr17 46540028 46540175 -48732476 - B1_Mur3 SINE Alu 0 149 2 8 940 364 281 176 67 chr17 46540312 46540522 -48732129 + B4 SINE B4 41 273 -19 8 940 745 207 14 20 chr17 46540643 46540791 -48731860 - B1_Mus2 SINE Alu 0 147 1 9 940 2249 93 25 6 chr17 46540823 46541147 -48731504 + 7SK RNA RNA 1 330 -1 9 940 478 273 143 29 chr17 46541168 46541447 -48731204 - L1MC4 LINE L1 -286 7756 7446 8 940 379 316 103 20 chr17 46541525 46541825 -48730826 - L1MC4 LINE L1 -821 7221 6897 8 940 362 21 21 0 chr17 46541889 46541936 -48730715 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 9 940 380 137 0 40 chr17 46541936 46542004 -48730647 - B1_Mur4 SINE Alu -12 138 74 9 940 528 296 0 22 chr17 46542009 46542147 -48730504 - ID_B1 SINE B4 0 224 90 9 940 627 197 71 0 chr17 46543143 46543270 -48729381 - B1_Mur2 SINE Alu -9 140 5 9 940 270 365 17 67 chr17 46543502 46543681 -48728970 + B4A SINE B4 3 172 -120 9 940 328 244 11 68 chr17 46543734 46543822 -48728829 + RSINE1 SINE B4 83 165 0 9 940 315 0 0 0 chr17 46543836 46543871 -48728780 + (T)n Simple_repeat Simple_repeat 1 35 0 9 940 435 206 24 12 chr17 46544953 46545120 -48727531 + (TA)n Simple_repeat Simple_repeat 1 169 0 9 940 384 263 84 130 chr17 46545136 46545398 -48727253 - B4 SINE B4 0 292 43 1 940 736 199 170 6 chr17 46545535 46545717 -48726934 - B3 SINE B2 -3 213 2 1 940 291 122 0 0 chr17 46548437 46548486 -48724165 + (CCCCCA)n Simple_repeat Simple_repeat 3 51 0 1 940 252 0 0 0 chr17 46549463 46549491 -48723160 + (GAA)n Simple_repeat Simple_repeat 1 28 0 1 940 1322 98 38 0 chr17 46553247 46553430 -48719221 + B2_Mm2 SINE B2 1 190 -5 1 940 799 199 193 0 chr17 46553523 46553704 -48718947 - B3 SINE B2 0 216 1 1 940 432 0 0 0 chr17 46554337 46554385 -48718266 + (TTTC)n Simple_repeat Simple_repeat 4 51 0 1 940 2083 169 160 4 chr17 46554403 46554866 -48717785 - Lx9 LINE L1 -43 7601 7067 1 940 518 313 14 0 chr17 46554941 46555088 -48717563 - B1F2 SINE Alu 0 149 1 1 940 21 57 0 0 chr17 46555137 46555172 -48717479 + AT_rich Low_complexity Low_complexity 1 35 0 1 940 618 258 62 68 chr17 46556518 46556680 -48715971 + RSINE1 SINE B4 5 165 0 1 940 468 252 26 138 chr17 46556814 46556939 -48715712 + B3A SINE B2 52 167 -31 1 940 351 0 0 0 chr17 46556939 46556978 -48715673 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 940 287 252 26 138 chr17 46556978 46557004 -48715647 + B2_Mm2 SINE B2 162 186 -9 1 940 1286 82 49 11 chr17 46557016 46557201 -48715450 + B2_Mm2 SINE B2 2 193 -2 1 940 517 326 43 0 chr17 46557699 46557840 -48714811 + RSINE1 SINE B4 2 148 -17 1 940 531 158 228 0 chr17 46558061 46558175 -48714476 + B1_Mur1 SINE Alu 1 140 -9 1 940 637 212 106 0 chr17 46558210 46558342 -48714309 - B3 SINE B2 -69 147 2 1 940 918 146 14 0 chr17 46559106 46559250 -48713401 + B1_Mus1 SINE Alu 3 148 0 1 940 1205 34 13 20 chr17 46559364 46559513 -48713138 + B1_Mus1 SINE Alu 1 148 0 1 940 360 75 30 0 chr17 46559595 46559657 -48712994 - B1_Mus2 SINE Alu -34 115 45 1 940 835 192 151 11 chr17 46559697 46559876 -48712775 - B3 SINE B2 -11 205 2 1 940 303 297 25 67 chr17 46559956 46560075 -48712576 - PB1D10 SINE Alu -3 114 1 1 940 337 191 100 110 chr17 46560445 46560545 -48712106 - B1_Mus1 SINE Alu -41 107 9 1 940 636 153 88 37 chr17 46560522 46560658 -48711993 + B1_Mur3 SINE Alu 7 149 0 1 940 221 323 16 0 chr17 46560801 46560863 -48711788 + ID4_ SINE ID 4 66 -17 1 940 1230 55 0 0 chr17 46561066 46561212 -48711439 - B1_Mm SINE Alu -1 146 1 1 940 5029 63 8 0 chr17 46561245 46561867 -48710784 - L1_Mus1 LINE L1 0 6567 5941 1 940 1495 241 83 3 chr17 46562338 46562724 -48709927 - MTD LTR MaLR 0 419 3 1 940 308 240 104 0 chr17 46562727 46562823 -48709828 - L1_Mm LINE L1 -411 5773 5668 1 940 21 36 0 0 chr17 46562831 46562859 -48709792 + AT_rich Low_complexity Low_complexity 1 28 0 1 940 676 200 91 44 chr17 46563038 46563242 -48709409 - B3 SINE B2 -14 202 12 1 940 632 258 138 22 chr17 46563253 46563529 -48709122 - L1_Mm LINE L1 -503 5675 5343 1 940 855 55 0 0 chr17 46563544 46563653 -48708998 + (GCTTG)n Simple_repeat Simple_repeat 2 110 0 1 940 707 238 24 24 chr17 46563671 46563835 -48708816 - ID_B1 SINE B4 0 224 61 1 940 706 226 13 27 chr17 46563892 46564042 -48708609 + B1_Mur3 SINE Alu 2 149 0 1 940 192 200 0 0 chr17 46564047 46564092 -48708559 + GA-rich Low_complexity Low_complexity 4 48 0 1 940 227 291 177 26 chr17 46564094 46564207 -48708444 - B4A SINE B4 -79 213 84 1 940 391 261 95 9 chr17 46564343 46564459 -48708192 + B3 SINE B2 67 192 -24 1 940 382 120 316 53 chr17 46564513 46564627 -48708024 + B2_Mm2 SINE B2 47 190 -5 1 940 1504 68 11 0 chr17 46565032 46565223 -48707428 - B2_Mm1t SINE B2 0 193 1 1 940 201 286 128 13 chr17 46565397 46565475 -48707176 - MIR SINE MIR -30 232 146 1 940 486 0 0 0 chr17 46565721 46565775 -48706876 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 940 459 0 0 0 chr17 46566000 46566051 -48706600 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 940 735 182 29 0 chr17 46568744 46568881 -48703770 - B1_Mur3 SINE Alu 0 149 9 1 940 357 287 43 112 chr17 46568746 46568907 -48703744 - B4 SINE B4 -69 223 74 1 940 1179 50 0 0 chr17 46570206 46570345 -48702306 + B1_Mus2 SINE Alu 1 139 -8 1 940 203 23 0 83 chr17 46570345 46570393 -48702258 + (CAA)n Simple_repeat Simple_repeat 2 45 0 1 940 306 357 57 25 chr17 46571161 46571319 -48701332 - MIRc SINE MIR -74 194 32 1 940 243 0 0 0 chr17 46572623 46572650 -48700001 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 940 563 206 38 8 chr17 46572700 46572832 -48699819 - B4A SINE B4 -30 262 127 1 940 840 274 42 5 chr17 46572973 46573186 -48699465 - ID_B1 SINE B4 -1 223 3 1 940 204 221 0 0 chr17 46573236 46573313 -48699338 + (TG)n Simple_repeat Simple_repeat 2 78 0 1 940 446 220 6 0 chr17 46573397 46573574 -48699077 + (TG)n Simple_repeat Simple_repeat 2 179 0 1 940 280 242 406 0 chr17 46573577 46573705 -48698946 - B3A SINE B2 -18 180 1 1 940 209 224 43 29 chr17 46573963 46574032 -48698619 + (CACCC)n Simple_repeat Simple_repeat 4 73 0 1 940 1434 73 5 16 chr17 46575994 46576188 -48696463 - B2_Mm1a SINE B2 0 193 2 1 940 373 273 26 26 chr17 46577092 46577205 -48695446 + RSINE1 SINE B4 2 114 -51 1 940 1018 133 0 32 chr17 46577426 46577581 -48695070 + B1_Mur4 SINE Alu 1 150 0 1 940 421 231 17 0 chr17 46578505 46578608 -48694043 + PB1D10 SINE Alu 1 110 -10 1 940 599 221 27 20 chr17 46578669 46578817 -48693834 - B1F SINE Alu 0 149 1 1 940 349 376 30 6 chr17 46581150 46581316 -48691335 + L3b LINE CR1 173 342 -140 1 940 206 316 0 13 chr17 46582510 46582587 -48690064 + GA-rich Low_complexity Low_complexity 1 76 0 1 940 277 330 0 0 chr17 46582736 46582827 -48689824 - Charlie16a DNA MER1_type -112 230 140 1 940 597 160 0 0 chr17 46584350 46584456 -48688195 + CT-rich Low_complexity Low_complexity 2 107 0 1 940 345 102 0 0 chr17 46586150 46586209 -48686442 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 940 321 26 0 0 chr17 46586209 46586247 -48686404 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 1 940 464 331 8 0 chr17 46586265 46586395 -48686256 + ID_B1 SINE B4 90 220 -4 1 940 911 217 127 17 chr17 46586414 46586705 -48685946 + Lx9 LINE L1 7307 7629 -15 1 940 562 301 13 13 chr17 46586757 46586912 -48685739 + B4 SINE B4 75 229 -63 1 940 767 104 9 0 chr17 46586918 46587033 -48685618 + B1_Mur4 SINE Alu 34 149 -1 1 940 368 286 120 0 chr17 46587546 46587679 -48684972 + B1F1 SINE Alu 1 149 0 1 940 477 264 98 39 chr17 46587739 46587950 -48684701 + B4A SINE B4 1 231 -61 1 940 638 185 79 36 chr17 46587972 46588112 -48684539 + B3 SINE B2 49 194 -22 1 940 1521 64 11 0 chr17 46588159 46588347 -48684304 + B2_Mm1t SINE B2 1 190 -3 1 940 792 59 0 0 chr17 46588360 46588462 -48684189 + (GAAA)n Simple_repeat Simple_repeat 4 105 0 1 940 249 229 82 0 chr17 46588463 46588524 -48684127 + B4A SINE B4 222 287 -5 1 940 309 116 0 42 chr17 46588636 46588708 -48683943 + T-rich Low_complexity Low_complexity 2 70 0 1 940 425 189 18 41 chr17 46589357 46589466 -48683185 + B1F2 SINE Alu 23 117 0 1 940 208 108 54 0 chr17 46590986 46591023 -48681628 + C-rich Low_complexity Low_complexity 6 44 0 1 940 222 118 0 0 chr17 46591494 46591528 -48681123 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 1 940 209 171 0 0 chr17 46591990 46592025 -48680626 + G-rich Low_complexity Low_complexity 2 36 0 1 940 216 67 0 0 chr17 46592493 46592523 -48680128 + (CGGGG)n Simple_repeat Simple_repeat 1 30 0 1 940 397 76 30 0 chr17 46593736 46593802 -48678849 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 940 252 0 0 0 chr17 46593951 46593979 -48678672 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 940 1571 57 16 0 chr17 46594018 46594210 -48678441 + B2_Mm2 SINE B2 1 195 0 1 940 183 262 98 0 chr17 46594797 46594858 -48677793 + MIR SINE MIR 171 237 -25 1 940 237 397 8 8 chr17 46595379 46595506 -48677145 - Tigger14a DNA MER2_type -97 227 101 1 940 326 222 0 47 chr17 46596290 46596375 -48676276 + HAL1-3A_ME LINE L1 1976 2056 -802 1 940 734 183 21 0 chr17 46598675 46598817 -48673834 - B1F SINE Alu 0 149 5 1 940 1518 32 26 21 chr17 46598877 46598908 -48673743 - B2_Mm1a SINE B2 0 193 161 1 940 207 0 0 0 chr17 46598908 46598931 -48673720 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 1 940 1518 32 26 21 chr17 46598931 46599091 -48673560 - B2_Mm1a SINE B2 -33 160 1 1 940 235 282 67 56 chr17 46599100 46599190 -48673461 + MIR SINE MIR 110 200 -62 1 940 200 304 29 0 chr17 46600870 46600939 -48671712 + MIR SINE MIR 12 82 -180 1 940 498 17 0 0 chr17 46601313 46601372 -48671279 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 940 186 261 149 21 chr17 46601655 46601749 -48670902 + MIRm SINE MIR 54 159 -117 1 940 1005 108 4 0 chr17 46602328 46602578 -48670073 + (TC)n Simple_repeat Simple_repeat 1 251 0 1 940 230 298 170 0 chr17 46602700 46602794 -48669857 + PB1D7 SINE Alu 9 118 -2 1 940 408 40 0 0 chr17 46602795 46602845 -48669806 + (GGA)n Simple_repeat Simple_repeat 1 50 0 1 940 622 302 0 7 chr17 46602889 46603029 -48669622 - ID_B1 SINE B4 -45 179 41 1 940 269 359 18 18 chr17 46603550 46603720 -48668931 + L2 LINE L2 2728 2897 -522 1 940 213 39 0 0 chr17 46605499 46605525 -48667126 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 940 879 96 96 0 chr17 46608146 46608271 -48664380 + B1_Mus1 SINE Alu 2 138 -10 1 940 410 0 20 0 chr17 46608271 46608321 -48664330 + (GA)n Simple_repeat Simple_repeat 2 52 0 2 940 201 197 30 15 chr17 46608347 46608414 -48664237 + (TATG)n Simple_repeat Simple_repeat 3 70 0 2 940 758 231 39 62 chr17 46608414 46608622 -48664029 - B3 SINE B2 -13 203 1 2 940 210 37 0 0 chr17 46608684 46608711 -48663940 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 940 689 189 9 1 chr17 46608781 46608928 -48663723 - B1_Mur1 SINE Alu -1 148 1 2 940 393 353 22 66 chr17 46608928 46609131 -48663520 - B4 SINE B4 -96 196 1 2 940 474 248 53 0 chr17 46609131 46609244 -48663407 - PB1D7 SINE Alu -1 119 1 2 940 933 220 174 182 chr17 46609338 46609466 -48663185 + MT2A LTR ERVL 3 119 -414 2 940 1181 35 0 34 chr17 46609466 46609612 -48663039 - B1_Mus2 SINE Alu -5 142 2 2 940 933 220 174 182 chr17 46609612 46610016 -48662635 + MT2A LTR ERVL 120 531 -2 2 940 751 120 48 0 chr17 46611699 46611866 -48660785 + (TG)n Simple_repeat Simple_repeat 1 175 0 2 940 639 259 83 18 chr17 46611869 46612038 -48660613 - B3A SINE B2 -16 182 3 2 940 591 171 0 9 chr17 46612042 46612154 -48660497 - PB1D10 SINE Alu 0 117 7 2 940 186 43 0 0 chr17 46612208 46612231 -48660420 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 940 843 229 34 34 chr17 46612250 46612458 -48660193 + ID_B1 SINE B4 12 219 -5 2 940 207 88 0 0 chr17 46612789 46612823 -48659828 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 2 940 648 154 88 81 chr17 46612823 46612971 -48659680 - B1_Mur4 SINE Alu -1 149 1 2 940 939 102 11 28 chr17 46613002 46613183 -48659468 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 2 940 408 69 0 0 chr17 46613184 46613199 -48659452 + (TC)n Simple_repeat Simple_repeat 1 15 0 2 940 405 0 0 0 chr17 46613199 46613244 -48659407 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 2 940 408 69 0 0 chr17 46613244 46613286 -48659365 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 940 463 194 75 68 chr17 46613286 46613419 -48659232 - B1_Mur1 SINE Alu -14 135 2 2 940 222 325 77 31 chr17 46614948 46615078 -48657573 - MIRc SINE MIR -101 167 32 2 940 583 74 0 21 chr17 46615254 46615350 -48657301 - L1_Mus3 LINE L1 -1 6637 6544 2 940 892 97 37 0 chr17 46615367 46615501 -48657150 - B1_Mur4 SINE Alu 0 150 12 2 940 349 269 38 162 chr17 46615395 46615635 -48657016 - MT2B2 LTR ERVL -307 277 68 2 940 506 158 25 39 chr17 46616292 46616660 -48655991 + (TCTG)n Simple_repeat Simple_repeat 1 362 0 2 940 292 254 24 17 chr17 46616725 46616740 -48655911 - B4 SINE B4 -192 100 48 2 940 214 282 0 27 chr17 46616740 46616813 -48655838 - B3A SINE B2 -115 83 13 2 940 554 267 45 28 chr17 46617508 46617685 -48654966 + ID_B1 SINE B4 41 220 -4 2 940 580 286 26 13 chr17 46617717 46617873 -48654778 + RSINE1 SINE B4 6 163 -2 2 940 774 252 112 16 chr17 46618541 46618791 -48653860 + ORSL DNA Tip100 2 275 0 2 940 203 328 77 39 chr17 46618905 46619086 -48653565 + MIR3 SINE MIR 5 192 -16 2 940 459 0 0 0 chr17 46619371 46619422 -48653229 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 940 1215 63 0 0 chr17 46619430 46619573 -48653078 - B1_Mus2 SINE Alu -4 143 1 2 940 450 0 0 0 chr17 46621472 46621522 -48651129 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 940 574 266 0 14 chr17 46622746 46622891 -48649760 + ID_B1 SINE B4 82 224 0 2 940 297 272 24 47 chr17 46623033 46623118 -48649533 + ID4_ SINE ID 1 83 0 2 940 553 309 6 12 chr17 46623137 46623301 -48649350 + RSINE1 SINE B4 1 163 -2 2 940 253 304 11 32 chr17 46623332 46623427 -48649224 + BC1_Mm scRNA scRNA 20 112 -40 2 940 477 0 0 0 chr17 46623664 46623717 -48648934 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 940 220 127 36 0 chr17 46624390 46624445 -48648206 + (CGG)n Simple_repeat Simple_repeat 3 59 0 2 940 30 0 0 0 chr17 46624448 46624478 -48648173 + GC_rich Low_complexity Low_complexity 1 30 0 2 940 207 0 0 0 chr17 46624544 46624567 -48648084 + (CCCGG)n Simple_repeat Simple_repeat 3 25 0 2 940 346 339 109 38 chr17 46625449 46625633 -48647018 + B4 SINE B4 33 229 -63 2 940 526 94 19 19 chr17 46625645 46625753 -48646898 + (CAGAGA)n Simple_repeat Simple_repeat 6 113 0 2 940 452 283 30 73 chr17 46625760 46625924 -48646727 + RSINE1 SINE B4 5 161 -4 2 940 183 77 14 84 chr17 46625960 46625992 -48646659 + (TAA)n Simple_repeat Simple_repeat 3 34 0 2 940 1156 82 0 0 chr17 46625992 46626139 -48646512 + B1_Mus1 SINE Alu 1 147 -1 2 940 183 77 14 84 chr17 46626139 46626150 -48646501 + (TAA)n Simple_repeat Simple_repeat 2 11 0 2 940 1265 48 0 0 chr17 46626150 46626297 -48646354 + B1_Mus2 SINE Alu 1 147 0 2 940 183 77 14 84 chr17 46626297 46626323 -48646328 + (TAA)n Simple_repeat Simple_repeat 3 25 0 2 940 307 257 80 0 chr17 46626330 46626443 -48646208 + L1MA4 LINE L1 5814 5935 -365 2 940 353 286 0 0 chr17 46626488 46626572 -48646079 + RSINE1 SINE B4 82 165 0 2 940 670 291 69 65 chr17 46626854 46627144 -48645507 + B4A SINE B4 2 292 0 2 940 522 0 0 0 chr17 46627147 46627205 -48645446 + (GA)n Simple_repeat Simple_repeat 2 59 0 2 940 278 149 30 0 chr17 46627212 46627279 -48645372 + (CAGA)n Simple_repeat Simple_repeat 4 72 0 2 940 741 167 8 0 chr17 46627315 46627441 -48645210 + B1_Mur4 SINE Alu 24 150 0 2 940 267 235 14 14 chr17 46627465 46627534 -48645117 + ID4_ SINE ID 1 69 -14 2 940 226 114 0 0 chr17 46627600 46627635 -48645016 - B1_Mm SINE Alu -5 142 108 2 940 223 83 56 0 chr17 46627627 46627663 -48644988 - B1_Mus2 SINE Alu -109 38 1 2 940 425 261 81 33 chr17 46627684 46627845 -48644806 - L1MEa LINE L1 -5303 791 622 2 940 1090 88 0 39 chr17 46627850 46628003 -48644648 - B1_Mm SINE Alu 0 147 1 2 940 208 240 0 0 chr17 46628109 46628159 -48644492 + T-rich Low_complexity Low_complexity 4 53 0 2 940 230 371 23 8 chr17 46628168 46628301 -48644350 - L1M3 LINE L1 -392 5776 5642 2 940 833 209 73 15 chr17 46628301 46628505 -48644146 - B3 SINE B2 0 216 1 2 940 3029 59 39 46 chr17 46628677 46628857 -48643794 + MTB_Mm LTR MaLR 1 195 -212 2 940 1177 74 0 0 chr17 46628857 46629005 -48643646 + B1_Mus1 SINE Alu 1 148 0 2 940 435 38 0 0 chr17 46629010 46629063 -48643588 + (GAAAA)n Simple_repeat Simple_repeat 2 54 0 2 940 3029 59 39 46 chr17 46629063 46629286 -48643365 + MTB_Mm LTR MaLR 196 407 0 2 940 706 184 42 7 chr17 46629328 46629470 -48643181 - ID_B1 SINE B4 0 224 78 2 940 787 260 88 0 chr17 46629503 46629695 -48642956 - B3 SINE B2 0 216 8 2 940 370 312 117 7 chr17 46630204 46630309 -48642342 + RSINE1 SINE B4 3 123 -42 2 940 324 70 0 0 chr17 46630309 46630352 -48642299 + (CATA)n Simple_repeat Simple_repeat 3 45 0 2 940 370 312 117 7 chr17 46630352 46630391 -48642260 + RSINE1 SINE B4 124 162 -3 2 940 711 303 24 9 chr17 46630403 46630616 -48642035 + B3 SINE B2 1 216 0 2 940 505 223 19 10 chr17 46630634 46630738 -48641913 - PB1D9 SINE Alu -14 106 2 2 940 965 214 48 14 chr17 46630805 46631014 -48641637 + B3 SINE B2 1 216 0 2 940 412 309 119 10 chr17 46631501 46631694 -48640957 - RMER5 LTR ERV1 -317 217 4 2 940 189 0 0 0 chr17 46632006 46632027 -48640624 + (CATG)n Simple_repeat Simple_repeat 3 23 0 2 940 293 242 0 0 chr17 46632355 46632417 -48640234 + Lx8 LINE L1 6800 6861 -612 2 940 703 256 220 18 chr17 46632471 46632757 -48639894 + Lx8 LINE L1 6985 7328 -145 2 940 996 211 9 40 chr17 46632764 46632956 -48639695 + B3 SINE B2 1 188 -28 2 940 2922 52 0 0 chr17 46632956 46633302 -48639349 - ORR1A1 LTR MaLR 0 346 1 2 940 996 211 9 40 chr17 46633302 46633331 -48639320 + B3 SINE B2 189 215 -1 2 940 31 0 0 0 chr17 46633337 46633368 -48639283 + AT_rich Low_complexity Low_complexity 1 31 0 2 940 26 64 0 0 chr17 46633452 46633499 -48639152 + AT_rich Low_complexity Low_complexity 1 47 0 2 940 397 159 32 86 chr17 46634508 46634601 -48638050 + PB1D7 SINE Alu 27 127 0 2 940 484 290 43 7 chr17 46634684 46634823 -48637828 - ID_B1 SINE B4 0 224 81 2 940 600 221 28 0 chr17 46634828 46634973 -48637678 - B1_Mur4 SINE Alu -1 149 1 2 940 760 229 144 0 chr17 46636006 46636194 -48636457 - B3 SINE B2 0 216 2 2 940 2005 95 54 4 chr17 46636275 46636616 -48636035 + ORR1A3 LTR MaLR 1 386 -8 2 940 766 113 162 0 chr17 46636620 46636762 -48635889 + ORR1A3-int LTR MaLR 1 165 -1798 2 940 1014 131 62 43 chr17 46636704 46636912 -48635739 - ORR1A4 LTR MaLR -117 212 1 2 940 452 182 19 83 chr17 46636912 46637020 -48635631 + B1_Mm SINE Alu 46 146 -1 2 940 477 223 31 62 chr17 46637353 46637482 -48635169 + RSINE1 SINE B4 41 165 0 2 940 381 117 0 0 chr17 46637792 46637852 -48634799 + (TCC)n Simple_repeat Simple_repeat 1 60 0 2 940 783 111 25 0 chr17 46638490 46638625 -48634026 - B1_Mur4 SINE Alu -3 147 8 2 940 288 189 40 26 chr17 46641666 46641742 -48630909 + MTEa LTR MaLR 281 357 -22 2 940 819 166 123 8 chr17 46641764 46641955 -48630696 + B3 SINE B2 7 215 -1 2 940 632 112 9 53 chr17 46642865 46642882 -48629769 - B1_Mur4 SINE Alu -1 149 138 2 940 306 0 0 0 chr17 46642882 46642916 -48629735 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 2 940 632 112 9 53 chr17 46642916 46643011 -48629640 - B1_Mur4 SINE Alu -13 137 42 2 940 295 256 28 98 chr17 46642925 46642938 -48629713 - RLTR25B LTR ERVK -507 521 473 2 940 302 194 27 117 chr17 46642938 46643049 -48629602 - MT2B LTR ERVL -337 264 164 2 940 295 256 28 98 chr17 46643049 46643068 -48629583 - RLTR25B LTR ERVK -507 472 389 2 940 255 369 65 65 chr17 46643119 46643397 -48629254 + L2 LINE L2 2359 2636 -783 2 940 561 202 108 103 chr17 46643551 46643755 -48628896 - B4A SINE B4 -87 205 1 3 940 196 174 87 0 chr17 46643775 46643821 -48628830 + L2 LINE L2 2813 2862 -557 2 940 746 195 27 32 chr17 46644160 46644343 -48628308 + B3 SINE B2 3 185 -10 3 940 261 0 0 0 chr17 46644960 46644989 -48627662 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 3 940 466 188 36 11 chr17 46646375 46646491 -48626160 - PB1D9 SINE Alu -12 135 25 3 940 811 175 110 12 chr17 46646519 46646692 -48625959 + B2_Mm1t SINE B2 1 190 -3 3 940 233 301 40 120 chr17 46647045 46647245 -48625406 + MIR SINE MIR 35 218 -44 3 940 304 289 156 37 chr17 46647278 46647522 -48625129 + B4A SINE B4 1 273 -19 3 940 680 122 0 8 chr17 46647526 46647650 -48625001 + (CA)n Simple_repeat Simple_repeat 2 124 0 3 940 699 210 65 0 chr17 46648736 46648874 -48623777 + B1_Mur1 SINE Alu 2 148 -1 3 940 261 305 53 30 chr17 46648925 46649057 -48623594 + L1MC5 LINE L1 7057 7191 -770 3 940 529 286 106 6 chr17 46649089 46649268 -48623383 + ID_B1 SINE B4 9 205 -19 3 940 224 266 48 60 chr17 46649207 46649291 -48623360 + B1F SINE Alu 67 149 0 3 940 1109 187 0 32 chr17 46649727 46649943 -48622708 - B3 SINE B2 -7 209 1 3 940 870 288 14 0 chr17 46649970 46650185 -48622466 + ID_B1 SINE B4 2 219 -5 3 940 952 117 7 33 chr17 46650187 46650337 -48622314 + B1_Mus1 SINE Alu 3 148 0 3 940 243 0 0 0 chr17 46650603 46650630 -48622021 + (TGGA)n Simple_repeat Simple_repeat 2 28 0 3 940 259 288 14 0 chr17 46650933 46651006 -48621645 + L1MC5 LINE L1 7823 7896 -146 3 940 210 71 0 0 chr17 46651007 46651035 -48621616 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 940 211 277 0 0 chr17 46651035 46651082 -48621569 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 940 451 252 9 9 chr17 46651103 46651211 -48621440 + PB1D10 SINE Alu 10 117 0 3 940 1026 95 7 45 chr17 46651216 46651370 -48621281 + B1_Mur4 SINE Alu 2 149 -1 3 940 1793 53 0 0 chr17 46651371 46651598 -48621053 + L1Md_F2 LINE L1 5360 5586 -297 3 940 8673 26 1 2 chr17 46651598 46652609 -48620042 + L1Md_F2 LINE L1 5587 6582 0 3 940 189 0 0 0 chr17 46652892 46652913 -48619738 + (TTATG)n Simple_repeat Simple_repeat 3 23 0 3 940 576 0 0 0 chr17 46652928 46652992 -48619659 + (GA)n Simple_repeat Simple_repeat 1 64 0 3 940 1223 246 29 4 chr17 46653008 46653286 -48619365 + B4A SINE B4 5 289 -3 3 940 207 0 0 0 chr17 46653360 46653383 -48619268 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 940 623 276 61 9 chr17 46653423 46653635 -48619016 + ID_B1 SINE B4 2 224 0 3 940 1270 41 0 0 chr17 46653881 46654028 -48618623 + B1_Mus2 SINE Alu 1 147 0 3 940 32 0 0 0 chr17 46654028 46654060 -48618591 + AT_rich Low_complexity Low_complexity 1 32 0 3 940 833 94 16 0 chr17 46654154 46654282 -48618369 - B1_Mur4 SINE Alu 0 150 21 3 940 392 305 38 102 chr17 46654156 46654342 -48618309 - B4 SINE B4 -69 223 50 3 940 898 213 41 11 chr17 46654388 46654588 -48618063 + B3 SINE B2 1 186 -9 3 940 1754 83 4 49 chr17 46654763 46655030 -48617621 + L1_Mus2 LINE L1 6312 6566 0 3 940 500 255 149 21 chr17 46655138 46655326 -48617325 - ID_B1 SINE B4 -8 216 5 3 940 426 230 10 0 chr17 46655400 46655500 -48617151 + B1_Mus2 SINE Alu 44 144 -3 3 940 706 239 151 11 chr17 46655571 46655757 -48616894 + B3 SINE B2 4 215 -1 3 940 841 183 30 0 chr17 46655782 46655951 -48616700 + B3 SINE B2 4 177 -39 3 940 399 319 103 35 chr17 46655986 46656298 -48616353 + L1ME3 LINE L1 5785 6117 -45 3 940 182 116 23 0 chr17 46656326 46656369 -48616282 + (CAAAAA)n Simple_repeat Simple_repeat 3 46 0 3 940 211 211 0 0 chr17 46657636 46657674 -48614977 + GA-rich Low_complexity Low_complexity 5 42 0 3 940 382 288 47 6 chr17 46659597 46659721 -48612930 + B3A SINE B2 3 141 -57 3 940 1263 41 0 0 chr17 46659760 46659907 -48612744 - B1_Mm SINE Alu 0 147 1 3 940 480 158 0 0 chr17 46660350 46660445 -48612206 + CT-rich Low_complexity Low_complexity 2 96 0 3 940 1163 69 7 0 chr17 46660785 46660930 -48611721 - B1_Mus2 SINE Alu 0 147 2 3 940 245 311 161 6 chr17 46661194 46661356 -48611295 + L2c LINE L2 3026 3212 -175 3 940 219 279 44 0 chr17 46661398 46661466 -48611185 - PB1 SINE Alu -53 74 4 3 940 450 272 48 0 chr17 46661523 46661626 -48611025 - PB1D10 SINE Alu -9 108 1 3 941 1497 53 32 0 chr17 46664243 46664430 -48608221 + B2_Mm2 SINE B2 1 193 -2 3 941 894 51 0 0 chr17 46664437 46664554 -48608097 + B1_Mus2 SINE Alu 31 147 0 3 941 328 314 0 0 chr17 46664582 46664668 -48607983 + PB1D10 SINE Alu 8 93 -24 3 941 302 152 0 17 chr17 46665837 46665897 -48606754 + G-rich Low_complexity Low_complexity 1 59 0 3 941 1138 137 56 14 chr17 46666089 46666304 -48606347 + ORR1B1 LTR MaLR 171 394 0 3 941 228 135 0 0 chr17 46666329 46666366 -48606285 + (TTTCC)n Simple_repeat Simple_repeat 3 39 0 3 941 464 214 20 10 chr17 46666380 46666479 -48606172 - RSINE1 SINE B4 -64 101 2 3 941 1244 104 5 58 chr17 46666542 46666747 -48605904 - B2_Mm2 SINE B2 -1 194 1 3 941 244 303 101 0 chr17 46667602 46667711 -48604940 + PB1D7 SINE Alu 1 120 0 3 941 214 309 29 14 chr17 46667798 46667867 -48604784 + ID4_ SINE ID 14 83 0 3 941 371 201 205 113 chr17 46668053 46668204 -48604447 + B4 SINE B4 12 176 -116 3 941 707 191 0 14 chr17 46668235 46668373 -48604278 + B4A SINE B4 157 292 0 3 941 1081 89 0 0 chr17 46668416 46668562 -48604089 - B1_Mus1 SINE Alu 0 148 3 3 941 365 187 230 109 chr17 46668580 46668754 -48603897 - B3A SINE B2 0 198 4 3 941 705 177 0 0 chr17 46668767 46668914 -48603737 + CT-rich Low_complexity Low_complexity 4 150 0 3 941 1304 88 10 10 chr17 46668914 46669108 -48603543 - B2_Mm2 SINE B2 0 195 2 3 941 7189 125 27 83 chr17 46669285 46670494 -48602157 + RLTR21 LTR ERVK 1 1127 -445 3 941 405 0 0 0 chr17 46670494 46670539 -48602112 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 941 7189 125 27 83 chr17 46670539 46670691 -48601960 + RLTR21 LTR ERVK 1128 1286 -286 3 941 423 0 0 0 chr17 46670691 46670738 -48601913 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 941 1269 177 48 34 chr17 46670738 46671030 -48601621 + RLTR21 LTR ERVK 1128 1423 -149 3 941 1205 104 11 21 chr17 46671088 46671274 -48601377 + B2_Mm1t SINE B2 2 185 -8 3 941 1074 129 6 34 chr17 46671277 46671454 -48601197 + RLTR21 LTR ERVK 1393 1564 -8 3 941 303 297 0 42 chr17 46671769 46671864 -48600787 - PB1D9 SINE Alu -29 91 1 3 941 456 67 0 0 chr17 46672002 46672062 -48600589 + (TTCC)n Simple_repeat Simple_repeat 2 61 0 3 941 421 219 147 17 chr17 46672069 46672185 -48600466 - B1_Mur1 SINE Alu -5 144 14 3 941 1231 34 0 0 chr17 46672331 46672478 -48600173 + B1_Mm SINE Alu 1 147 0 3 941 573 285 0 0 chr17 46672613 46672743 -48599908 + RSINE1 SINE B4 16 145 -20 3 941 414 0 0 0 chr17 46672751 46672797 -48599854 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 941 1289 55 54 16 chr17 46672835 46673021 -48599630 + B2_Mm2 SINE B2 2 194 -1 3 941 1573 36 0 0 chr17 46673289 46673481 -48599170 - B2_Mm1a SINE B2 0 193 2 3 941 799 286 10 0 chr17 46673492 46673515 -48599136 - B3A SINE B2 -4 194 171 3 941 207 0 0 0 chr17 46673515 46673538 -48599113 + (TCTG)n Simple_repeat Simple_repeat 4 26 0 3 941 799 286 10 0 chr17 46673538 46673706 -48598945 - B3A SINE B2 -28 170 2 3 941 246 261 243 0 chr17 46674212 46674323 -48598328 + MIRc SINE MIR 21 158 -110 3 941 198 118 0 0 chr17 46675740 46675774 -48596877 + (CCCCCT)n Simple_repeat Simple_repeat 6 39 0 3 941 591 220 45 0 chr17 46676711 46676843 -48595808 - B1_Mur2 SINE Alu -10 139 2 3 941 922 237 29 0 chr17 46676861 46677068 -48595583 - ID_B1 SINE B4 -10 214 2 3 941 1085 210 5 23 chr17 46677846 46678065 -48594586 - B3 SINE B2 0 216 2 3 941 555 346 21 4 chr17 46678175 46678456 -48594195 - B4A SINE B4 -2 290 5 3 941 351 0 0 0 chr17 46678930 46678969 -48593682 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 941 1812 149 117 92 chr17 46679010 46679294 -48593357 + RMER4A LTR ERVK 8 321 -145 3 941 1212 41 0 0 chr17 46679294 46679441 -48593210 + B1_Mm SINE Alu 1 147 0 3 941 1812 149 117 92 chr17 46679441 46679593 -48593058 + RMER4A LTR ERVK 322 455 -11 3 941 228 143 0 0 chr17 46679635 46679677 -48592974 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 941 500 218 0 37 chr17 46679686 46679804 -48592847 - PB1D9 SINE Alu -27 122 17 3 941 222 255 0 0 chr17 46680073 46680124 -48592527 + C-rich Low_complexity Low_complexity 1 51 0 3 941 26 50 0 0 chr17 46680886 46680926 -48591725 + AT_rich Low_complexity Low_complexity 1 40 0 3 941 261 0 0 0 chr17 46681042 46681071 -48591580 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 941 1950 156 91 50 chr17 46681072 46681512 -48591139 - RMER4A LTR ERVK -3 463 6 3 941 753 209 102 0 chr17 46681539 46681726 -48590925 + B3 SINE B2 5 210 -6 3 941 29 0 0 0 chr17 46681729 46681758 -48590893 + AT_rich Low_complexity Low_complexity 1 29 0 3 941 1165 34 0 7 chr17 46681759 46681906 -48590745 + B1_Mus1 SINE Alu 2 147 -1 3 941 670 265 46 5 chr17 46681919 46682116 -48590535 - B3 SINE B2 -11 205 1 3 941 317 328 51 51 chr17 46682139 46682157 -48590494 + ID_B1 SINE B4 78 215 -9 3 941 387 293 42 33 chr17 46682157 46682277 -48590374 + B1F SINE Alu 20 140 -9 3 941 1241 83 56 0 chr17 46682277 46682457 -48590194 + B2_Mm2 SINE B2 2 191 -4 3 941 33 25 0 0 chr17 46685260 46685300 -48587351 + AT_rich Low_complexity Low_complexity 1 40 0 3 941 22 35 0 0 chr17 46686180 46686209 -48586442 + AT_rich Low_complexity Low_complexity 1 29 0 3 941 306 0 0 0 chr17 46686218 46686252 -48586399 + (A)n Simple_repeat Simple_repeat 1 34 0 4 941 453 198 8 102 chr17 46688888 46689006 -48583645 + PB1D10 SINE Alu 3 109 -8 4 941 629 207 43 0 chr17 46689029 46689169 -48583482 + B1F2 SINE Alu 4 149 0 4 941 25 0 0 0 chr17 46692420 46692445 -48580206 + GC_rich Low_complexity Low_complexity 1 25 0 4 941 26 0 0 0 chr17 46692672 46692698 -48579953 + GC_rich Low_complexity Low_complexity 1 26 0 4 941 574 256 0 8 chr17 46694054 46694184 -48578467 + B1F1 SINE Alu 2 130 -19 4 941 850 138 0 0 chr17 46694212 46694342 -48578309 + B3 SINE B2 1 130 -86 4 941 2425 104 12 30 chr17 46694383 46694789 -48577862 + MTB_Mm LTR MaLR 1 399 -8 4 941 214 318 163 12 chr17 46694998 46695084 -48577567 + B1F SINE Alu 1 99 -50 4 941 378 0 0 0 chr17 46695104 46695146 -48577505 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 941 338 314 60 98 chr17 46695159 46695352 -48577299 + B4 SINE B4 43 226 -66 4 941 607 263 45 0 chr17 46695352 46695508 -48577143 + RSINE1 SINE B4 3 165 0 4 941 222 330 61 108 chr17 46695508 46695528 -48577123 + B4A SINE B4 227 246 -46 4 941 1047 87 0 0 chr17 46695552 46695690 -48576961 + B1_Mus1 SINE Alu 1 138 -10 4 941 297 0 0 0 chr17 46695693 46695726 -48576925 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 4 941 812 145 0 8 chr17 46695749 46695881 -48576770 + B1_Mus1 SINE Alu 18 148 0 4 941 1429 54 27 0 chr17 46695897 46696083 -48576568 + B2_Mm1t SINE B2 2 192 -1 4 941 244 250 15 15 chr17 46696092 46696157 -48576494 + B4 SINE B4 215 279 -13 4 941 553 175 0 91 chr17 46696320 46696439 -48576212 + PB1D9 SINE Alu 1 110 -10 4 941 369 0 0 0 chr17 46696439 46696480 -48576171 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 941 553 175 0 91 chr17 46696480 46696492 -48576159 + PB1D9 SINE Alu 111 120 0 4 941 770 244 26 5 chr17 46697199 46697393 -48575258 + B3 SINE B2 4 201 -15 4 941 608 253 138 31 chr17 46697428 46697624 -48575027 + ID_B1 SINE B4 7 223 -1 4 941 1215 34 0 0 chr17 46697684 46697831 -48574820 + B1_Mus1 SINE Alu 2 148 0 4 941 350 265 81 10 chr17 46697922 46698021 -48574630 + B3 SINE B2 99 204 -12 4 941 21 0 0 0 chr17 46698021 46698042 -48574609 + AT_rich Low_complexity Low_complexity 1 21 0 4 941 423 240 211 28 chr17 46698052 46698232 -48574419 + B3 SINE B2 3 215 -1 4 941 324 0 0 0 chr17 46698283 46698319 -48574332 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 941 570 202 53 0 chr17 46698319 46698433 -48574218 - B3 SINE B2 -94 122 3 4 941 238 221 11 55 chr17 46698477 46698568 -48574083 + B3A SINE B2 112 198 0 4 941 451 217 8 102 chr17 46698579 46698707 -48573944 + B1_Mur2 SINE Alu 22 137 -12 4 941 410 129 0 23 chr17 46699051 46699138 -48573513 + L1Md_F2 LINE L1 6498 6582 0 4 941 381 327 19 0 chr17 46699144 46699251 -48573400 + ID_B1 SINE B4 82 190 -34 4 941 449 330 43 48 chr17 46699478 46699538 -48573113 - ID_B1 SINE B4 -21 203 149 4 941 685 229 67 38 chr17 46699538 46699747 -48572904 - B3 SINE B2 -1 215 1 4 941 449 330 43 48 chr17 46699747 46699874 -48572777 - ID_B1 SINE B4 -76 148 17 4 941 1129 68 0 0 chr17 46699954 46700100 -48572551 - B1_Mus1 SINE Alu -1 147 2 4 941 32 57 0 0 chr17 46700167 46700220 -48572431 + AT_rich Low_complexity Low_complexity 1 53 0 4 941 688 210 68 91 chr17 46700290 46700471 -48572180 - B3 SINE B2 0 216 31 4 941 1383 89 5 0 chr17 46700471 46700662 -48571989 - B2_Mm1a SINE B2 -1 192 1 4 941 688 210 68 91 chr17 46700662 46700700 -48571951 - B3 SINE B2 -186 30 2 4 941 643 172 14 29 chr17 46700719 46700857 -48571794 - B1_Mus2 SINE Alu -9 138 3 4 941 776 233 14 41 chr17 46700899 46701118 -48571533 - B3 SINE B2 -3 213 1 4 941 237 123 13 40 chr17 46701457 46701533 -48571118 + A-rich Low_complexity Low_complexity 2 75 0 4 941 414 0 0 0 chr17 46702805 46702851 -48569800 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 941 535 239 18 0 chr17 46702858 46702967 -48569684 - RSINE1 SINE B4 -51 114 4 4 941 973 217 10 5 chr17 46703449 46703653 -48568998 + B3 SINE B2 3 207 -9 4 941 324 0 0 0 chr17 46703653 46703689 -48568962 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 4 941 1145 154 34 5 chr17 46703700 46703909 -48568742 + B3 SINE B2 1 215 -1 4 941 231 36 0 0 chr17 46703918 46703946 -48568705 + (CCA)n Simple_repeat Simple_repeat 1 28 0 4 941 444 232 16 111 chr17 46703946 46704072 -48568579 + PB1 SINE Alu 6 119 -8 4 941 24 0 0 0 chr17 46704128 46704152 -48568499 + AT_rich Low_complexity Low_complexity 1 24 0 4 941 642 84 158 63 chr17 46704490 46704617 -48568034 - B1_Mus1 SINE Alu 0 148 10 4 941 246 281 112 37 chr17 46704543 46704573 -48568078 - MT2B LTR ERVL -344 257 199 4 941 272 157 39 0 chr17 46704573 46704624 -48568027 - ID_B1 SINE B4 -91 133 81 4 941 246 281 112 37 chr17 46704624 46704650 -48568001 - MT2B LTR ERVL -344 198 143 4 941 379 241 11 0 chr17 46705247 46705334 -48567317 + B4A SINE B4 1 88 -204 4 941 229 258 163 39 chr17 46705436 46705565 -48567086 - B3A SINE B2 -52 146 2 4 941 544 201 72 86 chr17 46705702 46705854 -48566797 + B1_Mur4 SINE Alu 1 150 0 4 941 203 0 0 36 chr17 46705868 46705896 -48566755 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 941 1058 190 14 23 chr17 46706085 46706301 -48566350 + B3 SINE B2 3 216 0 4 941 235 236 209 0 chr17 46706800 46706910 -48565741 + RSINE1 SINE B4 4 136 -29 4 941 310 377 9 0 chr17 46706944 46707058 -48565593 - B1F SINE Alu -34 115 1 4 941 24 32 0 0 chr17 46707069 46707100 -48565551 + AT_rich Low_complexity Low_complexity 1 31 0 4 941 445 276 30 3 chr17 46707104 46707400 -48565251 + (TCTG)n Simple_repeat Simple_repeat 1 304 0 4 941 494 281 0 6 chr17 46707164 46707343 -48565308 + (TG)n Simple_repeat Simple_repeat 2 179 0 4 941 458 247 114 30 chr17 46707422 46707589 -48565062 - B3A SINE B2 -16 182 2 4 941 442 240 33 0 chr17 46707791 46707912 -48564739 - B1F SINE Alu -2 147 23 4 941 335 343 29 0 chr17 46708344 46708449 -48564202 + MIRb SINE MIR 76 183 -85 4 941 534 31 0 0 chr17 46708756 46708820 -48563831 + (CA)n Simple_repeat Simple_repeat 2 65 0 4 941 391 305 28 14 chr17 46709010 46709153 -48563498 + GA-rich Low_complexity Low_complexity 5 149 0 4 941 650 12 0 0 chr17 46709850 46709935 -48562716 - L1Md_T LINE L1 0 6582 6498 4 941 216 0 0 0 chr17 46710023 46710047 -48562604 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 941 880 189 22 33 chr17 46710090 46710271 -48562380 + B2_Mm2 SINE B2 1 179 -16 4 941 474 252 19 25 chr17 46711999 46712183 -48560468 - B1F SINE Alu 0 149 1 4 941 925 48 8 0 chr17 46712216 46712340 -48560311 + B1_Mus1 SINE Alu 24 148 0 4 941 300 191 0 0 chr17 46712394 46712478 -48560173 + (TG)n Simple_repeat Simple_repeat 1 84 0 4 941 659 256 60 13 chr17 46712483 46712675 -48559976 - B3A SINE B2 -11 205 7 4 941 295 302 43 89 chr17 46712681 46712936 -48559715 + ORR1E LTR MaLR 10 262 -97 4 941 263 209 60 20 chr17 46714352 46714503 -48558148 + (TA)n Simple_repeat Simple_repeat 1 157 0 4 941 487 227 46 72 chr17 46714773 46714925 -48557726 + B1_Mur1 SINE Alu 2 149 0 4 941 627 241 22 76 chr17 46714936 46715160 -48557491 + B3 SINE B2 1 212 -4 4 941 449 217 26 9 chr17 46715188 46715304 -48557347 + PB1D9 SINE Alu 3 120 0 4 941 458 267 65 22 chr17 46715325 46715463 -48557188 + B1F1 SINE Alu 5 148 -1 4 941 22 35 0 0 chr17 46715475 46715504 -48557147 + AT_rich Low_complexity Low_complexity 1 29 0 4 941 860 36 0 0 chr17 46716933 46717044 -48555607 + B1_Mus1 SINE Alu 37 147 -1 4 941 195 129 0 0 chr17 46717055 46717086 -48555565 + (GGA)n Simple_repeat Simple_repeat 3 33 0 4 941 215 223 102 41 chr17 46717477 46717575 -48555076 + L2 LINE L2 2393 2496 -923 4 941 816 286 105 40 chr17 46717731 46718160 -48554491 + RLTR12B LTR ERVK 47 503 -25 4 941 748 196 7 20 chr17 46718322 46718473 -48554178 - B1_Mur2 SINE Alu 0 149 1 4 941 449 47 16 0 chr17 46718486 46718550 -48554101 + (TA)n Simple_repeat Simple_repeat 1 65 0 4 941 485 226 7 0 chr17 46718572 46718688 -48553963 + B1_Mus1 SINE Alu 31 150 0 4 941 388 253 42 0 chr17 46718659 46718754 -48553897 - RSINE1 SINE B4 -25 140 42 4 941 1004 195 24 24 chr17 46719325 46719535 -48553116 + B3 SINE B2 1 210 -6 4 941 7891 132 21 100 chr17 46719938 46720595 -48552056 + RLTR21 LTR ERVK 1 667 -905 4 941 1555 32 5 0 chr17 46720595 46720783 -48551868 - B2_Mm1t SINE B2 -4 189 1 4 941 7891 132 21 100 chr17 46720783 46720867 -48551784 + RLTR21 LTR ERVK 668 724 -848 4 941 1150 68 0 0 chr17 46720867 46721015 -48551636 - B1_Mus1 SINE Alu 0 148 1 4 941 7891 132 21 100 chr17 46721015 46721538 -48551113 + RLTR21 LTR ERVK 725 1127 -445 4 941 360 0 0 0 chr17 46721538 46721578 -48551073 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 941 7891 132 21 100 chr17 46721578 46721749 -48550902 + RLTR21 LTR ERVK 1128 1302 -270 4 941 240 59 0 0 chr17 46721749 46721783 -48550868 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 941 7891 132 21 100 chr17 46721783 46721943 -48550708 + RLTR21 LTR ERVK 1303 1471 -101 4 941 263 97 22 0 chr17 46722420 46722469 -48550182 + B4 SINE B4 80 128 -96 4 941 718 291 73 14 chr17 46722474 46722749 -48549902 + B4A SINE B4 1 291 -1 4 941 540 0 0 0 chr17 46722758 46722818 -48549833 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 941 184 238 0 0 chr17 46722906 46722948 -48549703 - MIR SINE MIR -147 61 20 4 941 281 100 20 0 chr17 46723914 46723964 -48548687 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 941 592 281 60 0 chr17 46723990 46724157 -48548494 - B3 SINE B2 0 216 40 4 941 1027 72 0 0 chr17 46724175 46724313 -48548338 - B1_Mus1 SINE Alu 0 148 11 4 941 1060 200 66 10 chr17 46724316 46724513 -48548138 - B3 SINE B2 -4 212 5 4 941 201 143 20 39 chr17 46724592 46724643 -48548008 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 941 857 245 76 68 chr17 46724643 46724893 -48547758 - B4A SINE B4 0 292 41 5 941 1977 154 146 0 chr17 46724898 46725241 -48547410 + ORR1B1 LTR MaLR 2 394 0 5 941 255 253 92 13 chr17 46725271 46725347 -48547304 - ID_B1 SINE B4 -68 156 75 5 941 3363 134 128 19 chr17 46725674 46726346 -48546305 + RMER6A LTR ERVK 1 745 -11 5 941 306 0 0 0 chr17 46727898 46727932 -48544719 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 941 221 312 9 35 chr17 46728155 46728268 -48544383 + GA-rich Low_complexity Low_complexity 4 113 0 5 941 270 0 0 0 chr17 46728417 46728447 -48544204 + (TCCC)n Simple_repeat Simple_repeat 2 31 0 5 941 1192 73 16 2 chr17 46728954 46729142 -48543509 + B2_Mm1t SINE B2 3 186 -9 5 941 201 385 20 33 chr17 46730303 46730456 -48542195 - MIR3 SINE MIR -40 168 18 5 941 261 268 28 0 chr17 46730750 46730821 -48541830 - RMER30 DNA MER1_type -31 171 99 5 941 312 273 172 0 chr17 46730841 46730940 -48541711 - RSINE1 SINE B4 0 165 50 5 941 365 319 25 42 chr17 46730957 46731075 -48541576 - RSINE1 SINE B4 -44 121 6 5 941 180 0 0 0 chr17 46731156 46731176 -48541475 + (T)n Simple_repeat Simple_repeat 1 20 0 5 941 1221 61 0 0 chr17 46731176 46731324 -48541327 - B1_Mus1 SINE Alu 0 148 1 5 941 304 115 316 26 chr17 46732643 46732757 -48539894 - B2_Mm2 SINE B2 -2 193 47 5 941 1420 62 11 0 chr17 46732843 46733019 -48539632 - B2_Mm1t SINE B2 -15 178 1 5 941 189 0 0 0 chr17 46733039 46733060 -48539591 + (A)n Simple_repeat Simple_repeat 1 21 0 5 941 1073 96 0 0 chr17 46733064 46733220 -48539431 + B2_Mm2 SINE B2 2 157 -38 5 941 234 0 0 0 chr17 46733222 46733248 -48539403 + (CAAT)n Simple_repeat Simple_repeat 2 27 0 5 941 225 154 0 0 chr17 46733248 46733287 -48539364 + GA-rich Low_complexity Low_complexity 3 41 0 5 941 359 259 12 12 chr17 46733511 46733593 -48539058 - ID4 SINE ID 0 83 2 5 941 545 246 8 0 chr17 46733617 46733743 -48538908 - B1_Mur1 SINE Alu -10 139 13 5 941 451 245 0 20 chr17 46733770 46733870 -48538781 - PB1D10 SINE Alu -15 102 5 5 941 637 240 91 25 chr17 46734549 46734746 -48537905 - B3 SINE B2 -6 210 1 5 941 301 247 237 0 chr17 46734754 46734851 -48537800 - ID_B1 SINE B4 -3 221 102 5 941 396 206 40 0 chr17 46734836 46734932 -48537719 - B3 SINE B2 -87 111 5 5 941 964 155 53 32 chr17 46735765 46735952 -48536699 - URR1B DNA MER1_type 0 225 35 5 941 412 251 90 74 chr17 46736151 46736288 -48536363 + B2_Mm2 SINE B2 2 142 -53 5 941 318 26 0 0 chr17 46736288 46736327 -48536324 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 941 412 251 90 74 chr17 46736327 46736351 -48536300 + B2_Mm2 SINE B2 143 167 -28 5 941 1178 82 0 0 chr17 46736351 46736498 -48536153 + B1_Mus1 SINE Alu 1 147 -1 5 941 412 251 90 74 chr17 46736498 46736524 -48536127 + B2_Mm2 SINE B2 168 192 -3 5 941 264 256 4 74 chr17 46736524 46736637 -48536014 - Charlie5 DNA MER1_type -38 171 27 5 941 270 56 0 0 chr17 46736816 46736852 -48535799 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 941 573 256 161 42 chr17 46736877 46737138 -48535513 - B4A SINE B4 0 292 1 5 941 293 111 0 87 chr17 46737258 46737281 -48535370 + T-rich Low_complexity Low_complexity 41 63 0 5 941 1484 75 37 0 chr17 46737281 46737469 -48535182 - B2_Mm2 SINE B2 0 195 1 5 941 293 111 0 87 chr17 46737469 46737514 -48535137 + T-rich Low_complexity Low_complexity 1 40 0 5 941 637 309 37 5 chr17 46737643 46737832 -48534819 - B3A SINE B2 -3 195 1 5 941 648 168 0 34 chr17 46737875 46737992 -48534659 - B3 SINE B2 -103 113 1 5 941 448 255 153 29 chr17 46738182 46738300 -48534351 + B3A SINE B2 7 148 -50 5 941 415 70 14 14 chr17 46738300 46738373 -48534278 + (CA)n Simple_repeat Simple_repeat 1 73 0 5 941 448 255 153 29 chr17 46738373 46738424 -48534227 + B3A SINE B2 149 196 -2 5 941 745 159 30 0 chr17 46738440 46738572 -48534079 + B1_Mur2 SINE Alu 9 144 -5 5 941 760 148 128 12 chr17 46738573 46738594 -48534057 - B2_Mm1t SINE B2 -4 189 169 5 941 198 0 0 0 chr17 46738594 46738616 -48534035 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 941 931 89 3 14 chr17 46738616 46738758 -48533893 - B2_Mm2 SINE B2 -25 168 7 5 941 697 147 69 15 chr17 46738792 46738923 -48533728 + B1_Mus2 SINE Alu 10 147 0 5 941 182 62 31 0 chr17 46740044 46740076 -48532575 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 5 941 597 221 7 37 chr17 46740153 46740289 -48532362 + B3 SINE B2 3 134 -82 5 941 795 206 26 31 chr17 46740289 46740480 -48532171 - B3A SINE B2 0 198 9 5 941 1044 30 0 0 chr17 46740508 46740641 -48532010 + B1_Mm SINE Alu 9 141 -6 5 941 231 61 0 0 chr17 46740642 46740675 -48531976 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 5 941 1362 82 11 6 chr17 46740688 46740871 -48531780 + B2_Mm2 SINE B2 2 185 -10 5 941 268 293 0 0 chr17 46740877 46740935 -48531716 + RSINE1 SINE B4 37 94 -71 5 941 476 140 0 20 chr17 46741066 46741079 -48531572 + L1_Mus2 LINE L1 6467 6479 -87 5 941 1628 47 0 0 chr17 46741079 46741270 -48531381 + B2_Mm1a SINE B2 2 192 -1 5 941 476 140 0 20 chr17 46741270 46741358 -48531293 + L1_Mus2 LINE L1 6480 6565 -1 5 941 195 42 0 0 chr17 46741390 46741414 -48531237 + (A)n Simple_repeat Simple_repeat 1 24 0 5 941 206 344 0 0 chr17 46741534 46741598 -48531053 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 941 214 324 61 61 chr17 46742433 46742489 -48530162 + B4 SINE B4 36 216 -76 5 941 384 285 48 16 chr17 46742489 46742614 -48530037 + B1F1 SINE Alu 11 139 -10 5 941 793 222 61 51 chr17 46742641 46742855 -48529796 + B3 SINE B2 1 216 0 5 941 298 224 0 15 chr17 46742868 46742936 -48529715 + ID4_ SINE ID 5 71 -12 5 941 721 272 116 4 chr17 46743017 46743242 -48529409 + MTEa LTR MaLR 94 343 -36 5 941 326 305 28 19 chr17 46743287 46743394 -48529257 + PB1D10 SINE Alu 10 117 0 5 941 1094 70 0 0 chr17 46743448 46743590 -48529061 - B1_Mm SINE Alu -1 146 5 5 941 1252 34 0 0 chr17 46743645 46743792 -48528859 - B1_Mm SINE Alu 0 147 1 5 941 298 305 102 75 chr17 46743820 46743921 -48528730 + L1MC5 LINE L1 6967 7058 -903 5 941 537 227 36 0 chr17 46743921 46743971 -48528680 - PB1D9 SINE Alu -6 114 65 5 941 579 29 0 0 chr17 46743971 46744040 -48528611 + (GA)n Simple_repeat Simple_repeat 2 70 0 5 941 537 227 36 0 chr17 46744040 46744099 -48528552 - PB1D9 SINE Alu -56 64 2 5 941 298 305 102 75 chr17 46744099 46744252 -48528399 + L1MC5 LINE L1 7059 7228 -733 5 941 256 300 45 9 chr17 46744403 46744514 -48528137 + RSINE1 SINE B4 11 125 -40 5 941 830 121 14 47 chr17 46744525 46744673 -48527978 - B1_Mur3 SINE Alu 0 149 7 5 941 536 233 19 76 chr17 46745041 46745199 -48527452 - L2c LINE L2 -2 3385 3237 5 941 367 335 82 18 chr17 46745187 46745406 -48527245 - MIR SINE MIR 0 262 30 5 941 787 130 138 0 chr17 46745654 46745777 -48526874 + B1_Mur4 SINE Alu 3 142 -8 5 941 987 69 35 0 chr17 46745777 46745922 -48526729 + B2_Mm1a SINE B2 42 191 -2 5 941 647 56 24 4 chr17 46745937 46746043 -48526608 + B1_Mus2 SINE Alu 44 150 0 5 941 227 0 105 0 chr17 46746043 46746081 -48526570 + (CAAAA)n Simple_repeat Simple_repeat 5 46 0 5 941 258 32 0 0 chr17 46746083 46746114 -48526537 + (GAAAA)n Simple_repeat Simple_repeat 2 32 0 5 941 297 219 27 20 chr17 46746114 46746263 -48526388 + ORR1B1-int LTR MaLR 605 754 -755 5 941 1075 29 14 0 chr17 46746162 46746301 -48526350 + B1_Mm SINE Alu 7 147 0 5 941 246 32 0 0 chr17 46746409 46746440 -48526211 + (TGG)n Simple_repeat Simple_repeat 1 31 0 5 941 333 220 316 7 chr17 46747399 46747552 -48525099 - B3 SINE B2 0 216 15 5 941 330 26 0 0 chr17 46747864 46747903 -48524748 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 941 319 202 81 35 chr17 46747926 46748013 -48524638 - B3A SINE B2 -106 92 2 5 941 766 192 0 0 chr17 46748033 46748163 -48524488 - RSINE1 SINE B4 -33 132 3 5 941 1988 145 31 19 chr17 46748224 46748583 -48524068 - ORR1B1 LTR MaLR 0 394 32 5 941 475 149 483 28 chr17 46749508 46749653 -48522998 + B3 SINE B2 1 211 -5 5 941 843 250 29 5 chr17 46751013 46751218 -48521433 + ID_B1 SINE B4 2 211 -13 5 941 683 250 151 5 chr17 46751237 46751422 -48521229 + B3 SINE B2 4 215 -1 5 941 1269 20 0 7 chr17 46751518 46751666 -48520985 - B1_Mm SINE Alu 0 147 1 5 941 720 233 131 11 chr17 46751689 46751880 -48520771 - B3 SINE B2 0 216 3 5 941 180 135 0 0 chr17 46751932 46751969 -48520682 + (CAGA)n Simple_repeat Simple_repeat 4 40 0 5 941 746 153 27 34 chr17 46751978 46752127 -48520524 + B1_Mur2 SINE Alu 1 148 -1 5 941 244 304 37 13 chr17 46752131 46752267 -48520384 + MER2 DNA MER2_type 119 260 -85 5 941 365 300 48 35 chr17 46752527 46752672 -48519979 - B1F1 SINE Alu -2 147 1 5 941 339 300 52 160 chr17 46752836 46752939 -48519712 + B4A SINE B4 3 83 -209 5 941 797 132 86 29 chr17 46752939 46753079 -48519572 - B1_Mur3 SINE Alu 0 149 2 5 941 339 300 52 160 chr17 46753079 46753300 -48519351 + B4A SINE B4 84 292 0 5 941 423 289 14 40 chr17 46753587 46753735 -48518916 + ID_B1 SINE B4 81 224 0 5 941 609 133 33 0 chr17 46753741 46753861 -48518790 + GA-rich Low_complexity Low_complexity 4 127 0 5 941 216 0 0 0 chr17 46754484 46754508 -48518143 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 941 354 309 87 8 chr17 46754948 46755075 -48517576 + RSINE1 SINE B4 12 148 -17 5 941 23 78 0 0 chr17 46755101 46755152 -48517499 + AT_rich Low_complexity Low_complexity 1 51 0 5 941 237 33 0 0 chr17 46755288 46755318 -48517333 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 6 941 326 240 100 39 chr17 46757921 46757939 -48514712 + B1F1 SINE Alu 3 140 -9 6 941 495 194 0 36 chr17 46757939 46758051 -48514600 + ID_B1 SINE B4 108 215 -9 6 941 334 278 66 29 chr17 46758065 46758202 -48514449 + RSINE1 SINE B4 16 157 -8 6 941 726 177 202 44 chr17 46758868 46759051 -48513600 - B3 SINE B2 -4 212 1 6 941 282 164 0 0 chr17 46759061 46759116 -48513535 + (TCCA)n Simple_repeat Simple_repeat 3 57 0 6 941 397 272 0 0 chr17 46759116 46759197 -48513454 - ID4 SINE ID -1 82 2 6 941 531 0 0 0 chr17 46760220 46760279 -48512372 + (TCTCC)n Simple_repeat Simple_repeat 1 59 0 6 941 607 238 41 20 chr17 46760571 46760717 -48511934 + B1F1 SINE Alu 1 149 0 6 941 204 40 0 0 chr17 46761348 46761373 -48511278 + (CAG)n Simple_repeat Simple_repeat 3 27 0 6 941 28 0 0 0 chr17 46761969 46761997 -48510654 + AT_rich Low_complexity Low_complexity 1 28 0 6 941 458 223 53 18 chr17 46762168 46762282 -48510369 + RSINE1 SINE B4 12 129 -36 6 941 227 349 0 0 chr17 46762498 46762564 -48510087 + PB1D10 SINE Alu 17 82 -35 6 941 276 30 0 0 chr17 46762916 46762949 -48509702 + (CCCCCA)n Simple_repeat Simple_repeat 3 35 0 6 941 838 209 77 6 chr17 46763125 46763308 -48509343 + ID_B1 SINE B4 13 208 -16 6 941 321 89 0 0 chr17 46763343 46763388 -48509263 + (CAGA)n Simple_repeat Simple_repeat 3 47 0 6 941 497 266 11 92 chr17 46763619 46763793 -48508858 + RSINE1 SINE B4 3 162 -3 6 941 528 246 37 15 chr17 46763864 46764000 -48508651 + B1F SINE Alu 2 140 -9 6 941 212 0 36 0 chr17 46764737 46764765 -48507886 + (CAA)n Simple_repeat Simple_repeat 2 30 0 6 941 22 0 0 0 chr17 46765304 46765326 -48507325 + GC_rich Low_complexity Low_complexity 1 22 0 6 941 507 45 0 0 chr17 46765376 46765442 -48507209 + (TC)n Simple_repeat Simple_repeat 2 67 0 6 941 225 65 0 0 chr17 46768437 46768468 -48504183 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 6 941 545 239 62 0 chr17 46768472 46768602 -48504049 - B1_Mus1 SINE Alu -6 142 5 6 941 1258 41 0 0 chr17 46769228 46769375 -48503276 + B1_Mus2 SINE Alu 1 147 0 6 941 1271 125 0 0 chr17 46769388 46769564 -48503087 + B2_Mm2 SINE B2 1 176 -19 6 941 603 224 67 40 chr17 46769886 46770035 -48502616 + B3 SINE B2 37 189 -27 6 941 270 0 0 0 chr17 46770036 46770066 -48502585 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 941 1323 259 148 10 chr17 46770079 46770993 -48501658 + Lx5 LINE L1 6118 7457 -3 6 941 358 260 0 0 chr17 46771233 46771306 -48501345 - B1F SINE Alu -71 78 6 6 941 1446 89 16 0 chr17 46771384 46771574 -48501077 - B2_Mm2 SINE B2 0 195 3 6 941 1238 27 0 20 chr17 46771801 46771950 -48500701 - B1_Mm SINE Alu 0 147 2 6 941 398 229 83 25 chr17 46771950 46772071 -48500580 + B1_Mus1 SINE Alu 19 146 -2 6 941 654 264 24 12 chr17 46772083 46772248 -48500403 - B3A SINE B2 -18 180 14 6 941 246 191 109 16 chr17 46772256 46772320 -48500331 - PB1D10 SINE Alu -11 106 37 6 941 351 196 168 40 chr17 46773994 46774095 -48498556 + RSINE1 SINE B4 12 125 -40 6 941 840 101 0 0 chr17 46774624 46774762 -48497889 + (TG)n Simple_repeat Simple_repeat 1 138 0 6 941 428 259 9 27 chr17 46774773 46774884 -48497767 - B3 SINE B2 -104 112 4 6 941 419 258 11 0 chr17 46774933 46775022 -48497629 - RSINE1 SINE B4 -70 95 6 6 941 743 168 99 0 chr17 46775098 46775229 -48497422 + B1_Mur2 SINE Alu 2 145 -4 6 941 1216 48 0 20 chr17 46775260 46775410 -48497241 + B1_Mus2 SINE Alu 1 147 0 6 941 300 308 93 44 chr17 46775518 46775722 -48496929 + MER20B DNA MER1_type 499 712 -71 6 941 723 204 233 23 chr17 46775905 46776081 -48496570 + B3 SINE B2 4 216 0 6 941 183 80 0 0 chr17 46776486 46776511 -48496140 + (TCCC)n Simple_repeat Simple_repeat 2 26 0 6 941 1091 80 0 28 chr17 46778281 46778423 -48494228 - B1_Mus2 SINE Alu -8 139 2 6 941 1308 60 11 16 chr17 46778456 46778641 -48494010 + B2_Mm1t SINE B2 7 190 -3 6 941 1087 90 0 14 chr17 46779416 46779563 -48493088 + B1_Mus2 SINE Alu 1 145 -2 6 941 1322 127 23 5 chr17 46779606 46779827 -48492824 - URR1A DNA MER1_type 0 226 2 6 941 1203 191 24 0 chr17 46779827 46780037 -48492614 + B3 SINE B2 2 216 0 6 941 1243 86 46 6 chr17 46780062 46780237 -48492414 + B2_Mm2 SINE B2 3 184 -11 6 941 663 321 126 21 chr17 46780525 46780732 -48491919 + L2a LINE L2 2963 3201 -225 6 941 1168 85 62 6 chr17 46780732 46780909 -48491742 - B2_Mm2 SINE B2 -8 187 1 6 941 663 321 126 21 chr17 46780909 46781121 -48491530 + L2a LINE L2 3202 3425 -1 6 941 1232 48 7 0 chr17 46784588 46784735 -48487916 - B1_Mus1 SINE Alu 0 148 1 6 941 234 242 75 15 chr17 46785011 46785078 -48487573 - ID2 SINE ID -11 72 2 6 941 1233 48 7 0 chr17 46786104 46786250 -48486401 + B1_Mus1 SINE Alu 2 148 0 6 941 378 235 0 48 chr17 46786526 46786629 -48486022 + PB1D9 SINE Alu 21 118 -2 6 941 190 222 89 0 chr17 46787172 46787217 -48485434 + MIR3 SINE MIR 143 191 -17 6 941 225 0 0 0 chr17 46789234 46789259 -48483392 + (TG)n Simple_repeat Simple_repeat 1 25 0 6 941 228 274 44 59 chr17 46790339 46790475 -48482176 + MT2B LTR ERVL 127 260 -341 6 941 393 256 112 0 chr17 46790381 46790506 -48482145 + ID_B1 SINE B4 86 224 0 6 941 291 312 0 0 chr17 46791742 46791819 -48480832 - B4 SINE B4 0 292 216 6 941 507 129 12 0 chr17 46791856 46791950 -48480701 + B1_Mur3 SINE Alu 52 148 -1 6 941 512 251 23 21 chr17 46791978 46792110 -48480541 - B3 SINE B2 -15 180 48 6 941 1203 102 0 0 chr17 46792113 46792290 -48480361 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 6 941 955 103 0 0 chr17 46792290 46792426 -48480225 - B1_Mus1 SINE Alu -11 137 2 6 942 27 29 0 0 chr17 46793016 46793050 -48479601 + AT_rich Low_complexity Low_complexity 1 34 0 6 942 750 219 59 0 chr17 46793263 46793432 -48479219 + B3 SINE B2 38 216 0 6 942 225 180 0 0 chr17 46794174 46794224 -48478427 + GA-rich Low_complexity Low_complexity 2 51 0 6 942 603 0 0 0 chr17 46796199 46796266 -48476385 + (TG)n Simple_repeat Simple_repeat 1 67 0 6 942 225 65 0 0 chr17 46797332 46797363 -48475288 + (GA)n Simple_repeat Simple_repeat 2 32 0 6 942 392 228 18 82 chr17 46797363 46797473 -48475178 - PB1D9 SINE Alu -12 108 6 6 942 1101 84 7 0 chr17 46797525 46797668 -48474983 - B1_Mus2 SINE Alu 0 147 4 6 942 492 282 104 49 chr17 46797672 46797855 -48474796 - ID_B1 SINE B4 -31 193 1 6 942 357 284 3 0 chr17 46797860 46797946 -48474705 - ID_B1 SINE B4 -75 149 67 6 942 291 203 0 0 chr17 46798954 46799023 -48473628 + GA-rich Low_complexity Low_complexity 2 70 0 6 942 425 250 38 9 chr17 46799509 46799614 -48473037 + B1_Mur1 SINE Alu 36 143 -6 6 942 238 336 132 8 chr17 46802464 46802593 -48470058 - B1_Mur2 SINE Alu 0 149 5 6 942 335 212 257 0 chr17 46802609 46802722 -48469929 + B3 SINE B2 70 211 -5 6 942 915 111 14 7 chr17 46802722 46802867 -48469784 - B2_Mm2 SINE B2 -21 174 29 6 942 23 0 0 0 chr17 46802873 46802896 -48469755 + AT_rich Low_complexity Low_complexity 1 23 0 6 942 1049 205 14 14 chr17 46803058 46803262 -48469389 + MTD LTR MaLR 5 208 -211 6 942 702 146 85 0 chr17 46803262 46803392 -48469259 + B1_Mus1 SINE Alu 2 142 -6 6 942 829 205 133 0 chr17 46803422 46803617 -48469034 + MTD LTR MaLR 199 419 0 6 942 285 267 186 36 chr17 46803990 46804157 -48468494 + B3A SINE B2 2 193 -5 6 942 1661 21 0 25 chr17 46804192 46804390 -48468261 - B2_Mm1a SINE B2 0 193 1 6 942 719 172 16 1 chr17 46804405 46804543 -48468108 + B1_Mur4 SINE Alu 10 149 -1 6 942 283 229 33 0 chr17 46805228 46805289 -48467362 - ID SINE ID -148 76 14 6 942 769 106 187 58 chr17 46805314 46805450 -48467201 - B2_Mm1t SINE B2 0 193 36 6 942 3269 51 8 20 chr17 46805450 46805850 -48466801 - MTA_Mm LTR MaLR 0 396 2 6 942 769 106 187 58 chr17 46805850 46805884 -48466767 - B2_Mm1t SINE B2 -158 35 1 6 942 306 273 97 85 chr17 46805867 46805891 -48466760 - B4 SINE B4 -45 247 185 6 942 564 179 27 0 chr17 46805891 46806003 -48466648 - B1_Mur1 SINE Alu 0 149 35 6 942 306 273 97 85 chr17 46806003 46806043 -48466608 - B4 SINE B4 -45 184 70 6 942 1313 27 0 0 chr17 46806049 46806196 -48466455 - B1_Mus2 SINE Alu 0 147 1 6 942 1307 75 29 6 chr17 46806217 46806390 -48466261 - B2_Mm2 SINE B2 -14 181 5 6 942 180 0 0 0 chr17 46806490 46806510 -48466141 + (TC)n Simple_repeat Simple_repeat 1 20 0 6 942 387 279 69 0 chr17 46806567 46806691 -48465960 - ID_B1 SINE B4 -147 145 1 6 942 560 172 16 49 chr17 46807590 46807712 -48464939 - B1_Mur3 SINE Alu 0 149 32 6 942 956 126 0 7 chr17 46807748 46807884 -48464767 - B1_Mur4 SINE Alu -13 137 3 6 942 192 174 0 0 chr17 46807967 46807981 -48464670 + A-rich Low_complexity Low_complexity 1 14 0 6 942 1139 43 43 0 chr17 46807981 46808122 -48464529 + B1_Mus2 SINE Alu 1 147 0 6 942 192 174 0 0 chr17 46808122 46808153 -48464498 + A-rich Low_complexity Low_complexity 15 45 0 6 942 206 62 0 30 chr17 46808156 46808189 -48464462 + (GGGA)n Simple_repeat Simple_repeat 1 32 0 6 942 345 274 57 36 chr17 46808224 46808364 -48464287 + RSINE1 SINE B4 20 162 -3 6 942 270 0 0 0 chr17 46808639 46808669 -48463982 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 7 942 257 310 47 65 chr17 46808677 46808784 -48463867 - PB1D10 SINE Alu -12 105 1 7 942 1150 74 0 13 chr17 46808882 46809032 -48463619 - B1_Mus1 SINE Alu 0 148 1 7 942 378 365 14 7 chr17 46809863 46810009 -48462642 + RSINE1 SINE B4 16 162 -3 7 942 378 0 0 0 chr17 46810034 46810076 -48462575 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 942 811 131 45 15 chr17 46810150 46810282 -48462369 - B1_Mur4 SINE Alu -13 137 2 7 942 234 233 33 0 chr17 46810344 46810404 -48462247 + L2 LINE L2 2822 2883 -536 7 942 1016 126 152 30 chr17 46810414 46810611 -48462040 + URR1B DNA MER1_type 5 225 0 7 942 424 202 45 0 chr17 46810614 46810703 -48461948 - B1_Mur2 SINE Alu -56 93 1 7 942 239 259 21 96 chr17 46810622 46810716 -48461935 - MT2B LTR ERVL -361 240 154 7 942 310 261 54 11 chr17 46810863 46810956 -48461695 + B1F SINE Alu 2 98 -51 7 942 207 0 0 0 chr17 46810993 46811016 -48461635 + (CAAAC)n Simple_repeat Simple_repeat 5 27 0 7 942 444 160 277 0 chr17 46812702 46812796 -48459855 + PB1D9 SINE Alu 1 120 0 7 942 22 0 0 0 chr17 46815701 46815723 -48456928 + GC_rich Low_complexity Low_complexity 1 22 0 7 942 436 198 42 75 chr17 46816760 46816880 -48455771 + B1_Mur1 SINE Alu 34 149 0 7 942 338 213 40 0 chr17 46819100 46819119 -48453532 + B4 SINE B4 64 85 -207 7 942 589 150 133 0 chr17 46819119 46819232 -48453419 + B1_Mur3 SINE Alu 1 128 -21 7 942 204 40 0 0 chr17 46819449 46819474 -48453177 + (T)n Simple_repeat Simple_repeat 1 25 0 7 942 1292 20 0 0 chr17 46819474 46819621 -48453030 - B1_Mm SINE Alu 0 147 1 7 942 217 297 12 65 chr17 46822849 46822947 -48449704 + ID2 SINE ID 1 93 -59 7 942 186 103 0 0 chr17 46824954 46824983 -48447668 + (CTGGGG)n Simple_repeat Simple_repeat 2 30 0 7 942 461 280 38 8 chr17 46825590 46825723 -48446928 + B3A SINE B2 1 137 -61 7 942 377 141 14 0 chr17 46825780 46825851 -48446800 + (CATA)n Simple_repeat Simple_repeat 3 74 0 7 942 766 182 86 21 chr17 46825872 46826012 -48446639 + B1_Mur1 SINE Alu 1 149 0 7 942 796 239 49 15 chr17 46826034 46826238 -48446413 + B3 SINE B2 3 213 -3 7 942 234 128 43 0 chr17 46826247 46826294 -48446357 - B1_Mur4 SINE Alu 0 150 102 7 942 303 242 43 32 chr17 46826332 46826426 -48446225 + ID_B1 SINE B4 82 176 -48 7 942 428 216 24 27 chr17 46826345 46826468 -48446183 + PB1D10 SINE Alu 17 149 0 7 942 762 19 226 0 chr17 46826520 46826626 -48446025 + B1_Mus1 SINE Alu 5 134 -14 7 942 189 0 0 0 chr17 46826630 46826651 -48446000 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 7 942 866 141 35 0 chr17 46827225 46827367 -48445284 + B1_Mus1 SINE Alu 1 147 -1 7 942 238 231 189 77 chr17 46827386 46827504 -48445147 + PB1D7 SINE Alu 15 149 0 7 942 254 201 8 0 chr17 46827538 46827592 -48445059 + B3A SINE B2 8 63 -132 7 942 222 321 289 0 chr17 46827722 46827836 -48444815 + MIR SINE MIR 121 267 -9 7 942 836 148 0 0 chr17 46828132 46828260 -48444391 - B1_Mus1 SINE Alu -14 134 7 7 942 422 227 0 112 chr17 46828163 46828297 -48444354 - MT2B LTR ERVL -344 257 139 7 942 232 235 20 0 chr17 46828278 46828329 -48444322 - PB1 SINE Alu -59 68 17 7 942 1366 171 14 0 chr17 46828364 46828586 -48444065 - URR1B DNA MER1_type 0 225 1 7 942 1199 132 26 16 chr17 46828590 46828751 -48443900 + B2_Mm2 SINE B2 2 162 -33 7 942 432 0 0 0 chr17 46828751 46828799 -48443852 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 7 942 1199 132 26 16 chr17 46828799 46828829 -48443822 + B2_Mm2 SINE B2 163 195 0 7 942 186 43 0 0 chr17 46828830 46828853 -48443798 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 7 942 213 343 19 48 chr17 46828853 46828957 -48443694 + L2c LINE L2 3278 3378 -9 7 942 1247 153 18 5 chr17 46829017 46829234 -48443417 + URR1A DNA MER1_type 1 220 -6 7 942 426 196 79 40 chr17 46829407 46829508 -48443143 + PB1D9 SINE Alu 10 114 -6 7 942 597 159 69 5 chr17 46829523 46829667 -48442984 + B3 SINE B2 29 188 -10 7 942 1583 26 0 69 chr17 46829768 46829972 -48442679 + B2_Mm1a SINE B2 2 191 -2 7 942 453 172 86 0 chr17 46830869 46830962 -48441689 - ID_B1 SINE B4 -123 101 1 7 942 219 368 18 36 chr17 46830993 46831103 -48441548 + ID_B1 SINE B4 77 184 -40 7 942 329 298 24 11 chr17 46831012 46831122 -48441529 + PB1D10 SINE Alu 12 124 -25 7 942 378 342 9 0 chr17 46831132 46831243 -48441408 + PB1D7 SINE Alu 1 112 -8 7 942 525 202 119 0 chr17 46831255 46831364 -48441287 + RSINE1 SINE B4 3 124 -41 7 942 24 32 0 0 chr17 46831378 46831409 -48441242 + AT_rich Low_complexity Low_complexity 1 31 0 7 942 260 324 117 22 chr17 46831599 46831779 -48440872 - L2c LINE L2 -59 3328 3132 7 942 311 266 161 15 chr17 46832076 46832206 -48440445 - B1F SINE Alu 0 149 1 7 942 322 133 83 0 chr17 46832229 46832289 -48440362 - PB1D9 SINE Alu 0 120 56 7 942 1192 75 0 0 chr17 46832398 46832545 -48440106 + B1_Mus1 SINE Alu 2 148 0 7 942 1222 29 0 0 chr17 46832577 46832715 -48439936 + B1_Mm SINE Alu 2 139 -8 7 942 185 0 40 0 chr17 46832715 46832740 -48439911 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 7 942 340 327 77 6 chr17 46833100 46833269 -48439382 + MLT1C LTR MaLR 98 278 -189 7 942 224 255 79 53 chr17 46833328 46833463 -48439188 + B4A SINE B4 11 152 -140 7 942 764 159 28 0 chr17 46833464 46833609 -48439042 - URR1A DNA MER1_type 0 226 78 7 942 231 36 0 0 chr17 46833787 46833815 -48438836 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 7 942 904 109 94 0 chr17 46833818 46833946 -48438705 - B1_Mus1 SINE Alu -7 141 2 7 942 474 282 53 15 chr17 46833989 46834122 -48438529 + B3A SINE B2 39 176 -22 7 942 414 0 0 0 chr17 46834127 46834173 -48438478 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 942 388 262 39 10 chr17 46834198 46834302 -48438349 + MLT1C LTR MaLR 357 463 -4 7 942 1361 82 33 0 chr17 46834328 46834512 -48438139 + B2_Mm1a SINE B2 1 190 -3 7 942 989 175 71 52 chr17 46834578 46834789 -48437862 + B3 SINE B2 2 216 0 7 942 585 160 123 25 chr17 46835457 46835579 -48437072 - B1_Mur4 SINE Alu -7 143 10 7 942 295 256 89 44 chr17 46836554 46836644 -48436007 - PB1D10 SINE Alu -7 110 17 7 942 183 42 0 0 chr17 46837169 46837193 -48435458 + (TTG)n Simple_repeat Simple_repeat 1 24 0 7 942 473 212 26 9 chr17 46837193 46837307 -48435344 - BC1_Mm scRNA scRNA -35 117 2 7 942 1146 56 7 7 chr17 46837417 46837562 -48435089 - B1_Mm SINE Alu -1 146 2 7 942 438 116 0 0 chr17 46837563 46837632 -48435019 + B1_Mur3 SINE Alu 81 149 0 7 942 498 289 44 0 chr17 46838571 46838730 -48433921 + L3 LINE CR1 4320 4485 -4 7 942 299 313 83 15 chr17 46839336 46839469 -48433182 + MIR SINE MIR 24 165 -97 7 942 420 256 0 0 chr17 46840705 46840787 -48431864 + ID4 SINE ID 1 82 -1 7 942 518 273 31 6 chr17 46841008 46841170 -48431481 + MIR3 SINE MIR 38 203 -5 7 942 306 282 0 23 chr17 46842651 46842738 -48429913 - L2c LINE L2 -61 3326 3242 7 942 494 281 28 14 chr17 46842851 46842992 -48429659 + ID_B1 SINE B4 82 224 0 7 942 225 65 0 0 chr17 46842992 46843023 -48429628 + (A)n Simple_repeat Simple_repeat 1 31 0 7 942 528 223 62 0 chr17 46843196 46843308 -48429343 + B3A SINE B2 7 125 -73 7 942 324 70 0 0 chr17 46843313 46843356 -48429295 + (CATA)n Simple_repeat Simple_repeat 4 46 0 7 942 832 167 6 74 chr17 46843388 46843593 -48429058 + B3A SINE B2 9 186 -9 7 942 190 330 71 54 chr17 46843599 46843711 -48428940 - L2c LINE L2 -752 2667 2554 7 942 181 312 106 28 chr17 46843731 46843873 -48428778 - L2c LINE L2 -1335 2084 1932 7 942 414 252 3 11 chr17 46844266 46844374 -48428277 - PB1D10 SINE Alu -16 132 23 7 942 304 203 125 0 chr17 46844423 46844487 -48428164 + ID4_ SINE ID 1 72 -11 7 942 428 296 0 18 chr17 46844512 46844616 -48428035 + PB1D10 SINE Alu 1 104 -13 7 942 352 35 53 0 chr17 46844616 46844673 -48427978 + (CAAA)n Simple_repeat Simple_repeat 1 60 0 7 942 1227 49 0 0 chr17 46844678 46844819 -48427832 + B1_Mm SINE Alu 1 142 -5 7 942 243 131 0 62 chr17 46844822 46844887 -48427764 + A-rich Low_complexity Low_complexity 4 64 0 7 942 1324 108 16 16 chr17 46845267 46845455 -48427196 + B2_Mm2 SINE B2 1 188 -7 7 942 232 167 24 0 chr17 46845463 46845505 -48427146 + GA-rich Low_complexity Low_complexity 1 43 0 7 942 746 159 56 35 chr17 46845729 46845872 -48426779 - B1_Mur3 SINE Alu -1 148 3 7 942 2388 137 111 5 chr17 46845881 46846330 -48426321 + RMER15 LTR ERVL 1 497 -78 7 942 208 95 0 45 chr17 46846330 46846374 -48426277 + (TTTTTG)n Simple_repeat Simple_repeat 5 46 0 7 942 525 41 0 0 chr17 46846381 46846454 -48426197 - B1_Mur4 SINE Alu 0 150 78 7 942 452 193 23 0 chr17 46846451 46846539 -48426112 + RMER15 LTR ERVL 483 572 -3 7 942 658 253 140 36 chr17 46846616 46846809 -48425842 - ID_B1 SINE B4 -10 214 2 7 942 762 181 197 33 chr17 46847138 46847321 -48425330 + B3 SINE B2 4 216 0 7 942 1386 109 16 0 chr17 46847757 46847949 -48424702 - B2_Mm2 SINE B2 0 195 1 7 942 1187 48 14 0 chr17 46847995 46848140 -48424511 - B1_Mus1 SINE Alu 0 148 2 7 942 285 315 87 0 chr17 46850247 46850339 -48422312 + PB1D7 SINE Alu 1 100 -20 7 942 494 239 83 0 chr17 46850431 46850572 -48422079 + ID_B1 SINE B4 70 222 -2 7 942 210 71 0 0 chr17 46851752 46851780 -48420871 + (CA)n Simple_repeat Simple_repeat 1 28 0 8 942 642 277 36 21 chr17 46851806 46851998 -48420653 + ID_B1 SINE B4 1 195 -29 8 942 1041 106 0 0 chr17 46852026 46852167 -48420484 + B1_Mur3 SINE Alu 1 141 -8 8 942 509 258 17 0 chr17 46852553 46852673 -48419978 - B1F SINE Alu -3 146 25 8 942 403 267 8 65 chr17 46852687 46852811 -48419840 - PB1D9 SINE Alu -2 118 2 8 942 214 205 0 0 chr17 46852825 46852864 -48419787 + T-rich Low_complexity Low_complexity 1 39 0 8 942 1373 103 0 25 chr17 46852864 46853064 -48419587 - B2_Mm2 SINE B2 0 195 1 8 942 671 132 9 0 chr17 46853066 46853180 -48419471 + (TTCC)n Simple_repeat Simple_repeat 2 116 0 8 942 519 180 52 43 chr17 46853180 46853296 -48419355 - ID_B1 SINE B4 0 224 108 8 942 369 279 165 54 chr17 46854046 46854307 -48418344 - B4A SINE B4 -1 291 2 8 942 1033 79 58 0 chr17 46854426 46854565 -48418086 - B1_Mus1 SINE Alu 0 148 2 8 942 865 146 0 0 chr17 46854907 46855044 -48417607 - B1_Mus2 SINE Alu 0 147 11 8 942 335 257 61 98 chr17 46855044 46855067 -48417584 - B4A SINE B4 -62 226 73 8 942 423 221 0 55 chr17 46855067 46855177 -48417474 + Lx4B LINE L1 6950 7053 -5 8 942 879 192 0 7 chr17 46855264 46855411 -48417240 + B1_Mur3 SINE Alu 4 149 0 8 942 536 281 23 0 chr17 46855423 46855551 -48417100 - RSINE1 SINE B4 -33 132 2 8 942 384 22 0 0 chr17 46855571 46855616 -48417035 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 942 794 156 0 28 chr17 46855698 46855713 -48416938 - B1_Mur2 SINE Alu 0 149 138 8 942 1269 34 0 7 chr17 46855713 46855862 -48416789 - B1_Mus1 SINE Alu 0 148 1 8 942 794 156 0 28 chr17 46855862 46855991 -48416660 - B1_Mur2 SINE Alu -12 137 9 8 942 338 218 17 137 chr17 46855895 46856012 -48416639 - MT2B LTR ERVL -344 257 155 8 942 843 93 67 161 chr17 46856403 46856445 -48416206 + B2_Mm2 SINE B2 1 29 -166 8 942 1188 81 0 0 chr17 46856445 46856593 -48416058 + B1_Mus1 SINE Alu 1 148 0 8 942 843 93 67 161 chr17 46856593 46856743 -48415908 + B2_Mm2 SINE B2 30 175 -20 8 942 214 286 33 77 chr17 46856760 46856851 -48415800 - PB1D7 SINE Alu -8 112 26 8 942 1041 37 0 0 chr17 46859705 46859839 -48412812 + (TC)n Simple_repeat Simple_repeat 1 134 0 8 942 602 194 18 8 chr17 46859880 46860007 -48412644 - B1_Mur1 SINE Alu 0 149 20 8 942 290 242 22 0 chr17 46861011 46861102 -48411549 + (TATATG)n Simple_repeat Simple_repeat 4 96 0 8 942 263 279 118 0 chr17 46863961 46864029 -48408622 + ID4_ SINE ID 4 79 -4 8 942 1647 21 16 0 chr17 46864504 46864694 -48407957 + B2_Mm1a SINE B2 1 193 0 8 942 213 65 0 0 chr17 46864734 46864765 -48407886 + (T)n Simple_repeat Simple_repeat 1 31 0 8 942 403 152 0 0 chr17 46864765 46864831 -48407820 + B1_Mur4 SINE Alu 80 145 -5 8 942 245 158 0 0 chr17 46864912 46864950 -48407701 - B3A SINE B2 -122 76 39 8 942 537 230 0 9 chr17 46864973 46865087 -48407564 - PB1D9 SINE Alu -6 114 2 8 942 663 292 10 25 chr17 46865096 46865296 -48407355 - B3A SINE B2 0 198 2 8 942 210 37 0 0 chr17 46867026 46867053 -48405598 + (CCCG)n Simple_repeat Simple_repeat 2 28 0 8 942 547 279 73 47 chr17 46867130 46867280 -48405371 - B3 SINE B2 -18 198 42 8 942 185 0 40 0 chr17 46867280 46867305 -48405346 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 8 942 802 133 94 0 chr17 46867305 46867433 -48405218 - B1_Mus1 SINE Alu -8 140 1 8 942 547 279 73 47 chr17 46867433 46867473 -48405178 - B3 SINE B2 -175 41 3 8 942 434 309 24 0 chr17 46867594 46867717 -48404934 + ID_B1 SINE B4 84 209 -15 8 942 352 301 80 14 chr17 46867717 46867731 -48404920 + B1F SINE Alu 3 148 -1 8 942 621 147 9 18 chr17 46867915 46868026 -48404625 - PB1D9 SINE Alu -1 119 10 8 942 533 170 14 54 chr17 46868037 46868181 -48404470 + PB1D9 SINE Alu 17 141 -9 8 942 207 0 0 0 chr17 46868181 46868204 -48404447 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 942 1036 98 33 0 chr17 46868211 46868364 -48404287 + B2_Mm2 SINE B2 1 158 -37 8 942 189 0 0 0 chr17 46868365 46868386 -48404265 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 8 942 424 259 37 0 chr17 46868436 46868544 -48404107 - RSINE1 SINE B4 -51 114 3 8 942 972 149 34 11 chr17 46868544 46868720 -48403931 - URR1A DNA MER1_type -2 224 45 8 942 492 229 114 8 chr17 46868733 46868856 -48403795 - B1F1 SINE Alu -13 136 1 8 942 302 292 19 19 chr17 46868877 46868985 -48403666 + PB1 SINE Alu 13 120 -7 8 942 310 333 61 25 chr17 46868986 46869149 -48403502 + HAL1-3A_ME LINE L1 2283 2451 -407 8 942 281 336 0 36 chr17 46869165 46869276 -48403375 + B1F SINE Alu 38 144 -5 8 942 291 250 37 103 chr17 46869488 46869595 -48403056 - PB1D7 SINE Alu -2 118 19 8 942 354 222 93 85 chr17 46869626 46869744 -48402907 - PB1D9 SINE Alu -1 119 1 8 942 234 227 0 0 chr17 46869965 46870009 -48402642 - B1F SINE Alu -3 146 103 8 942 1363 98 10 25 chr17 46870041 46870239 -48402412 - B2_Mm2 SINE B2 0 195 1 8 942 546 16 0 0 chr17 46870352 46870415 -48402236 + (CA)n Simple_repeat Simple_repeat 1 63 0 8 942 349 288 56 25 chr17 46871846 46872006 -48400645 - ID_B1 SINE B4 -6 218 54 8 942 899 147 165 73 chr17 46872614 46872820 -48399831 + URR1B DNA MER1_type 1 225 0 8 942 642 228 7 65 chr17 46874345 46874426 -48398225 + B1_Mur2 SINE Alu 3 84 -65 8 942 189 74 0 0 chr17 46874426 46874453 -48398198 + (TG)n Simple_repeat Simple_repeat 1 27 0 8 942 531 82 0 0 chr17 46874461 46874534 -48398117 + (TAGA)n Simple_repeat Simple_repeat 3 75 0 8 942 642 228 7 65 chr17 46874534 46874598 -48398053 + B1_Mur2 SINE Alu 85 148 -1 8 942 315 201 49 122 chr17 46875068 46875123 -48397528 + RCHARR1 DNA MER1_type 353 398 -576 8 942 1667 21 21 0 chr17 46875123 46875312 -48397339 - B2_Mm1a SINE B2 0 193 1 8 942 315 201 49 122 chr17 46875312 46875416 -48397235 + RCHARR1 DNA MER1_type 399 500 -474 8 942 614 236 0 45 chr17 46875416 46875571 -48397080 + B1_Mur1 SINE Alu 2 149 0 8 942 638 202 6 32 chr17 46875584 46875723 -48396928 + B1_Mur4 SINE Alu 6 149 -1 8 942 281 70 0 0 chr17 46875753 46875796 -48396855 + B1_Mus2 SINE Alu 105 147 0 8 942 340 245 116 81 chr17 46875822 46875995 -48396656 + RCHARR1 DNA MER1_type 488 666 -308 8 942 3080 40 53 0 chr17 46876000 46876376 -48396275 + MTA_Mm LTR MaLR 1 396 0 8 942 9182 42 6 1 chr17 46876376 46877469 -48395182 + MTA_Mm-int LTR MaLR 1 1098 0 8 942 2814 40 45 0 chr17 46877469 46877843 -48394808 + MTA_Mm LTR MaLR 1 391 -5 8 942 1624 21 16 16 chr17 46877843 46878036 -48394615 + B2_Mm1a SINE B2 1 193 0 8 942 254 246 33 0 chr17 46878099 46878160 -48394491 + RCHARR1 DNA MER1_type 681 743 -231 8 942 485 283 85 68 chr17 46878195 46878430 -48394221 - B4A SINE B4 -7 285 47 8 942 776 46 266 0 chr17 46878590 46878699 -48393952 - B1_Mm SINE Alu -8 139 2 8 942 348 254 0 0 chr17 46878777 46878848 -48393803 - B3A SINE B2 -123 75 5 8 942 492 18 0 0 chr17 46879062 46879119 -48393532 + (CA)n Simple_repeat Simple_repeat 1 57 0 8 942 413 304 29 15 chr17 46879242 46879324 -48393327 - B1F2 SINE Alu -7 142 57 8 942 1101 75 156 0 chr17 46879324 46879484 -48393167 + B2_Mm2 SINE B2 1 185 -10 8 942 413 304 29 15 chr17 46879484 46879538 -48393113 - B1F2 SINE Alu -93 56 4 8 942 623 272 36 76 chr17 46880532 46880755 -48391896 - B3 SINE B2 -1 215 2 8 942 423 345 94 25 chr17 46880844 46881046 -48391605 - B4A SINE B4 -29 263 48 8 942 410 198 0 4 chr17 46881077 46881163 -48391488 - B1_Mus1 SINE Alu -21 96 14 8 942 269 298 36 0 chr17 46881096 46881180 -48391471 - B4 SINE B4 -125 167 81 8 942 317 317 40 106 chr17 46881418 46881644 -48391007 + RLTR42-int LTR ERVK 1189 1399 -4123 8 942 1263 84 84 0 chr17 46882054 46882232 -48390419 + B2_Mm1a SINE B2 1 193 0 8 942 803 218 14 0 chr17 46882244 46882391 -48390260 + B1_Mur3 SINE Alu 1 149 0 8 942 339 260 0 0 chr17 46882392 46882488 -48390163 + GA-rich Low_complexity Low_complexity 2 97 0 8 942 255 232 101 0 chr17 46882551 46882620 -48390031 - MTE2b LTR MaLR -284 95 20 8 942 334 307 39 89 chr17 46882875 46882912 -48389739 - B2_Mm2 SINE B2 -1 194 151 8 942 198 71 0 0 chr17 46882912 46882940 -48389711 + (TG)n Simple_repeat Simple_repeat 2 29 0 8 942 581 268 2 12 chr17 46882940 46883081 -48389570 - B3A SINE B2 -42 156 25 8 942 1343 167 18 9 chr17 46883083 46883307 -48389344 + URR1A DNA MER1_type 1 226 0 8 942 287 192 315 0 chr17 46883319 46883392 -48389259 - B1_Mur4 SINE Alu -6 144 49 8 942 792 240 76 5 chr17 46883428 46883625 -48389026 - B3 SINE B2 -4 212 2 8 942 934 52 0 75 chr17 46883720 46883866 -48388785 + B1_Mus2 SINE Alu 13 147 0 8 942 1176 97 55 28 chr17 46883880 46884061 -48388590 - B2_Mm2 SINE B2 -8 187 2 8 942 318 197 14 14 chr17 46884680 46884752 -48387899 + PB1D10 SINE Alu 26 97 -20 8 942 634 204 42 35 chr17 46884772 46884914 -48387737 + B1_Mur2 SINE Alu 1 143 -6 8 942 678 224 37 79 chr17 46884934 46885123 -48387528 + B3A SINE B2 2 182 -16 8 942 244 107 35 35 chr17 46885148 46885206 -48387445 + (CATA)n Simple_repeat Simple_repeat 2 59 0 8 942 517 286 43 0 chr17 46885247 46885387 -48387264 + RSINE1 SINE B4 3 148 -17 8 942 1236 68 0 0 chr17 46885648 46885796 -48386855 + B1_Mus1 SINE Alu 1 148 0 8 942 1363 89 21 5 chr17 46885894 46886086 -48386565 - B2_Mm2 SINE B2 0 195 1 8 942 1224 68 0 0 chr17 46886089 46886236 -48386415 - B1_Mm SINE Alu 0 147 1 8 942 236 211 27 53 chr17 46887014 46887029 -48385622 + A-rich Low_complexity Low_complexity 4 18 0 8 942 1221 54 0 0 chr17 46887029 46887176 -48385475 + B1_Mus2 SINE Alu 1 147 0 8 942 236 211 27 53 chr17 46887176 46887199 -48385452 + A-rich Low_complexity Low_complexity 19 41 0 8 942 857 165 28 130 chr17 46887199 46887415 -48385236 + B2_Mm2 SINE B2 1 194 -1 9 942 1109 115 0 0 chr17 46887415 46887562 -48385089 + B1_Mus1 SINE Alu 1 148 0 9 942 236 211 27 53 chr17 46887562 46887596 -48385055 + A-rich Low_complexity Low_complexity 42 75 0 9 942 660 238 133 55 chr17 46887742 46888013 -48384638 - B4A SINE B4 0 292 1 9 942 294 266 21 86 chr17 46889500 46889523 -48383128 - ID_B1 SINE B4 -42 250 182 9 942 628 122 31 0 chr17 46889523 46889621 -48383030 - B1_Mm SINE Alu 0 147 47 9 942 294 266 21 86 chr17 46889621 46889641 -48383010 - ID_B1 SINE B4 -42 181 115 9 942 421 325 34 8 chr17 46889713 46889831 -48382820 - RSINE1 SINE B4 -42 123 3 9 942 1160 49 21 0 chr17 46890007 46890150 -48382501 + B1_Mus2 SINE Alu 1 146 -1 9 942 257 238 11 121 chr17 46890246 46890337 -48382314 + ID SINE ID 6 86 -138 9 942 224 242 97 0 chr17 46890760 46890822 -48381829 + PB1D10 SINE Alu 33 100 -17 9 942 324 26 0 0 chr17 46891128 46891166 -48381485 - ORR1A3 LTR MaLR -11 315 278 9 942 467 236 0 0 chr17 46891242 46891331 -48381320 + PB1D9 SINE Alu 32 120 0 9 942 203 229 16 0 chr17 46891367 46891428 -48381223 + GA-rich Low_complexity Low_complexity 4 65 0 9 942 696 128 18 0 chr17 46891483 46891592 -48381059 - ORR1A2 LTR MaLR 0 327 217 9 942 487 257 174 0 chr17 46891559 46891703 -48380948 + B3A SINE B2 10 178 -20 9 942 1992 90 124 72 chr17 46891804 46892152 -48380499 + ORR1B2 LTR MaLR 2 367 0 9 942 186 326 0 0 chr17 46892164 46892213 -48380438 + MIRm SINE MIR 228 276 0 9 942 1499 68 5 0 chr17 46892625 46892816 -48379835 - B2_Mm1t SINE B2 0 193 2 9 942 181 319 21 0 chr17 46892889 46892936 -48379715 - L2b LINE L2 -86 3289 3242 9 942 512 249 38 138 chr17 46894290 46894500 -48378151 + B4 SINE B4 16 204 -88 9 942 734 126 0 0 chr17 46894421 46894532 -48378119 + B1_Mm SINE Alu 35 145 -2 9 942 420 289 8 55 chr17 46894518 46894639 -48378012 + B4 SINE B4 66 180 -112 9 942 659 203 97 92 chr17 46894639 46894709 -48377942 + ID SINE ID 3 73 -151 9 942 942 129 0 87 chr17 46894709 46894870 -48377781 + B1_Mur3 SINE Alu 1 147 -2 9 942 24 0 0 0 chr17 46894886 46894910 -48377741 + AT_rich Low_complexity Low_complexity 1 24 0 9 942 277 104 58 77 chr17 46895123 46895175 -48377476 - PB1D7 SINE Alu 0 120 70 9 942 629 142 69 26 chr17 46895129 46895245 -48377406 - ID_B1 SINE B4 -2 222 102 9 942 216 97 0 0 chr17 46895352 46895383 -48377268 + (CAAG)n Simple_repeat Simple_repeat 1 31 0 9 942 210 239 21 21 chr17 46895383 46895430 -48377221 + B4 SINE B4 95 141 -151 9 942 2358 143 33 33 chr17 46895825 46896244 -48376407 + RMER4B LTR ERVK 17 435 -150 9 942 403 159 189 12 chr17 46896235 46896340 -48376311 + RMER4B LTR ERVK 469 572 -13 9 942 183 80 0 0 chr17 46896343 46896368 -48376283 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 9 942 243 0 0 0 chr17 46896368 46896395 -48376256 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 9 942 1048 66 58 0 chr17 46896395 46896532 -48376119 - B1_Mus1 SINE Alu -2 146 2 9 942 968 176 48 4 chr17 46896532 46896723 -48375928 - RMER19B LTR ERVK -648 254 2 9 942 369 0 0 0 chr17 46896723 46896764 -48375887 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 942 849 277 59 48 chr17 46896775 46897048 -48375603 - B4A SINE B4 -8 284 9 9 942 589 194 121 0 chr17 46897127 46897251 -48375400 - B1_Mus1 SINE Alu -8 140 2 9 942 436 282 87 16 chr17 46897548 46897674 -48374977 + RSINE1 SINE B4 2 136 -29 9 942 213 348 14 0 chr17 46897729 46897798 -48374853 + ID SINE ID 8 77 -147 9 942 455 211 40 101 chr17 46897933 46897944 -48374707 - B1F SINE Alu 0 149 141 9 942 1162 41 7 40 chr17 46897944 46898096 -48374555 - B1_Mus2 SINE Alu 0 147 1 9 942 455 211 40 101 chr17 46898096 46898232 -48374419 - B1F SINE Alu -9 140 11 9 942 558 211 23 155 chr17 46898118 46898292 -48374359 - ID_B1 SINE B4 -27 197 47 9 942 1008 258 14 0 chr17 46898343 46898556 -48374095 - B3 SINE B2 0 216 1 9 942 984 155 20 91 chr17 46898587 46898786 -48373865 + B2_Mm2 SINE B2 2 186 -9 9 942 1251 77 53 0 chr17 46898796 46898966 -48373685 + B2_Mm1t SINE B2 1 179 -14 9 942 429 111 324 27 chr17 46898997 46899108 -48373543 + B2_Mm2 SINE B2 46 189 -6 9 942 925 166 14 7 chr17 46899153 46899299 -48373352 + B1_Mur4 SINE Alu 2 148 -2 9 942 216 258 10 136 chr17 46899314 46899417 -48373234 - RSINE1 SINE B4 -2 163 74 9 942 700 100 371 0 chr17 46899817 46899957 -48372694 - B2_Mm2 SINE B2 -1 194 3 9 942 276 154 19 0 chr17 46900140 46900192 -48372459 - RMER4B LTR ERVK -60 525 473 9 942 1227 41 7 0 chr17 46900196 46900341 -48372310 + B1_Mus1 SINE Alu 3 148 0 9 942 738 164 0 38 chr17 46900874 46901007 -48371644 - B1_Mur1 SINE Alu -11 138 11 9 942 310 230 26 145 chr17 46900910 46901027 -48371624 - MT2B LTR ERVL -345 256 154 9 942 1254 55 0 0 chr17 46901175 46901321 -48371330 - B1_Mus2 SINE Alu 0 147 2 9 942 647 200 94 16 chr17 46901409 46901536 -48371115 + B1_Mur4 SINE Alu 6 142 -8 9 942 609 248 16 0 chr17 46901573 46901702 -48370949 - B3A SINE B2 -67 131 1 9 942 376 228 148 0 chr17 46901706 46901807 -48370844 - ID_B1 SINE B4 -1 223 108 9 942 23 0 0 0 chr17 46901811 46901834 -48370817 + AT_rich Low_complexity Low_complexity 1 23 0 9 942 207 0 0 0 chr17 46901908 46901931 -48370720 + (TC)n Simple_repeat Simple_repeat 2 24 0 9 942 877 265 99 16 chr17 46901969 46902272 -48370379 - Lx8 LINE L1 -326 7147 6820 9 942 630 187 70 21 chr17 46902279 46902421 -48370230 - B1_Mur4 SINE Alu -1 149 1 9 942 725 235 93 0 chr17 46902500 46902683 -48369968 + ID_B1 SINE B4 24 223 -1 9 942 207 108 27 0 chr17 46902693 46902730 -48369921 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 9 942 319 215 0 44 chr17 46902735 46902803 -48369848 - B3A SINE B2 -132 66 2 9 942 248 214 0 0 chr17 46902803 46902845 -48369806 + polypyrimidine Low_complexity Low_complexity 3 44 0 9 942 380 169 13 0 chr17 46902846 46902923 -48369728 + CT-rich Low_complexity Low_complexity 1 78 0 9 942 293 333 9 9 chr17 46902923 46903035 -48369616 - PB1D10 SINE Alu -5 112 1 9 942 678 234 10 55 chr17 46903284 46903483 -48369168 - B3 SINE B2 0 216 27 9 942 524 282 33 22 chr17 46903505 46903686 -48368965 + Lx8 LINE L1 6824 7006 -467 9 942 801 49 9 3 chr17 46903686 46903803 -48368848 - B1_Mus2 SINE Alu -27 122 2 9 942 396 258 72 43 chr17 46903803 46903831 -48368820 - B4 SINE B4 -198 94 63 9 942 410 203 0 53 chr17 46903915 46904240 -48368411 + (TTGG)n Simple_repeat Simple_repeat 1 307 0 9 942 255 198 0 55 chr17 46904204 46904332 -48368319 + (TGGG)n Simple_repeat Simple_repeat 3 123 0 9 942 299 173 29 14 chr17 46904341 46904425 -48368226 + B1_Mur1 SINE Alu 54 142 -7 9 942 305 125 0 18 chr17 46904426 46904433 -48368218 + (GAAAA)n Simple_repeat Simple_repeat 1 7 0 9 942 1201 68 0 7 chr17 46904433 46904582 -48368069 + B1_Mus1 SINE Alu 1 148 0 9 942 305 125 0 18 chr17 46904582 46904631 -48368020 + (GAAAA)n Simple_repeat Simple_repeat 3 51 0 9 942 261 204 20 0 chr17 46905465 46905514 -48367137 - ID4 SINE ID -28 55 6 9 942 441 296 40 145 chr17 46905770 46905865 -48366786 - B4 SINE B4 -23 269 193 9 942 1286 101 26 0 chr17 46905865 46906054 -48366597 - B2_Mm2 SINE B2 0 195 2 9 942 510 296 40 145 chr17 46906054 46906254 -48366397 - B4A SINE B4 -100 192 5 9 942 367 236 79 0 chr17 46906286 46906375 -48366276 - PB1D10 SINE Alu -21 96 1 9 942 410 303 37 63 chr17 46906409 46906654 -48365997 - ERVL-E-int LTR ERVL -4402 1312 1009 9 942 212 237 0 0 chr17 46906712 46906750 -48365901 + C-rich Low_complexity Low_complexity 3 40 0 9 942 684 230 141 26 chr17 46906750 46906942 -48365709 - ID_B1 SINE B4 -7 217 4 9 942 275 310 0 121 chr17 46906964 46907063 -48365588 - RSINE1 SINE B4 0 165 79 9 942 555 16 0 0 chr17 46907100 46907164 -48365487 + (TCTA)n Simple_repeat Simple_repeat 1 64 0 9 942 287 271 128 3 chr17 46907272 46907377 -48365274 + PB1D10 SINE Alu 3 118 -32 9 942 226 306 151 84 chr17 46907774 46907999 -48364652 - LTR33 LTR ERVL -180 335 96 9 942 456 278 151 18 chr17 46908097 46908244 -48364407 + B3 SINE B2 31 193 -5 9 942 1240 41 7 0 chr17 46908251 46908396 -48364255 + B1_Mus1 SINE Alu 3 148 0 9 942 564 15 0 0 chr17 46908397 46908462 -48364189 + (GGAAA)n Simple_repeat Simple_repeat 5 69 0 9 942 464 275 42 102 chr17 46908504 46908670 -48363981 + ID_B1 SINE B4 1 156 -68 9 942 254 279 52 41 chr17 46908672 46908769 -48363882 + B4A SINE B4 3 100 -192 9 942 225 194 0 0 chr17 46908862 46908898 -48363753 + ID_B1 SINE B4 173 208 -16 9 942 521 135 231 0 chr17 46910427 46910531 -48362120 + B2_Mm2 SINE B2 1 128 -67 9 942 243 228 188 12 chr17 46910631 46910664 -48361987 - RSINE1 SINE B4 -61 104 68 9 942 225 0 0 0 chr17 46910664 46910689 -48361962 + (C)n Simple_repeat Simple_repeat 1 25 0 9 942 243 228 188 12 chr17 46910689 46910735 -48361916 - RSINE1 SINE B4 -98 67 11 9 942 938 108 106 25 chr17 46910848 46911009 -48361642 - B2_Mm2 SINE B2 -7 188 15 9 942 227 213 197 0 chr17 46911235 46911295 -48361356 - PB1D9 SINE Alu -2 118 47 9 942 362 281 130 0 chr17 46911295 46911441 -48361210 + B3A SINE B2 1 165 -33 9 942 1194 54 0 20 chr17 46911756 46911907 -48360744 - B1_Mus1 SINE Alu 0 148 1 9 942 610 214 34 41 chr17 46911907 46912053 -48360598 - B1_Mus2 SINE Alu 0 147 3 1 942 260 243 30 159 chr17 46911942 46912074 -48360577 - MT2B LTR ERVL -337 264 150 1 942 566 174 34 17 chr17 46912160 46912277 -48360374 + PB1D9 SINE Alu 1 119 -1 1 942 257 265 221 41 chr17 46913065 46913171 -48359480 + RSINE1 SINE B4 2 129 -36 1 942 1413 191 45 32 chr17 46913171 46913485 -48359166 + RLTR25A LTR ERVK 1 318 -785 1 942 1026 112 12 50 chr17 46913486 46913646 -48359005 + B2_Mm1t SINE B2 2 155 -38 1 942 1347 71 16 11 chr17 46913650 46913818 -48358833 + B2_Mm2 SINE B2 9 179 -16 1 942 1056 99 14 0 chr17 46913818 46913959 -48358692 + B1_Mm SINE Alu 2 144 -3 1 942 227 31 0 30 chr17 46913959 46913992 -48358659 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1 942 1347 71 16 11 chr17 46913992 46914008 -48358643 + B2_Mm2 SINE B2 180 194 -1 1 942 1225 42 7 0 chr17 46914012 46914155 -48358496 + B1_Mus2 SINE Alu 3 146 -1 1 942 1210 138 16 0 chr17 46914208 46914396 -48358255 + B2_Mm2 SINE B2 3 193 -2 1 942 2286 182 90 24 chr17 46914396 46914959 -48357692 + RLTR25A LTR ERVK 405 1027 -1 1 942 478 296 0 9 chr17 46915744 46915860 -48356791 - PB1D7 SINE Alu -3 117 3 1 942 335 239 33 8 chr17 46915881 46915982 -48356669 - PB1D7 SINE Alu -18 99 2 1 942 1475 64 37 0 chr17 46916998 46917186 -48355465 + B2_Mm2 SINE B2 1 195 0 1 942 1128 64 14 0 chr17 46917826 46917967 -48354684 - B1_Mus2 SINE Alu -2 145 3 1 942 515 29 0 0 chr17 46917974 46918043 -48354608 - L1_Mus1 LINE L1 0 6567 6499 1 942 1245 102 23 0 chr17 46918043 46918219 -48354432 - B2_Mm2 SINE B2 -14 181 2 1 942 233 236 160 40 chr17 46918258 46918333 -48354318 - PB1D10 SINE Alu -5 112 29 1 942 417 211 141 8 chr17 46918352 46918477 -48354174 + B1_Mur1 SINE Alu 24 148 -1 1 942 265 284 159 28 chr17 46920045 46920190 -48352461 + MIRb SINE MIR 75 238 -30 1 942 1352 42 0 18 chr17 46920690 46920848 -48351803 + B2_Mm1a SINE B2 1 158 -35 1 942 468 0 0 0 chr17 46920848 46920900 -48351751 + (TAA)n Simple_repeat Simple_repeat 3 54 0 1 942 1352 42 0 18 chr17 46920900 46920912 -48351739 + B2_Mm1a SINE B2 159 168 -25 1 942 1205 112 6 27 chr17 46921015 46921036 -48351615 - B2_Mm2 SINE B2 -15 180 163 1 942 216 0 0 0 chr17 46921036 46921060 -48351591 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1 942 1205 112 6 27 chr17 46921060 46921221 -48351430 - B2_Mm2 SINE B2 -33 162 2 1 942 873 177 7 0 chr17 46921227 46921374 -48351277 - B1_Mus1 SINE Alu 0 148 1 1 942 1250 41 0 0 chr17 46921452 46921599 -48351052 + B1_Mus2 SINE Alu 1 147 0 1 942 209 230 0 123 chr17 46921599 46921623 -48351028 + A-rich Low_complexity Low_complexity 1 22 0 1 942 1225 54 0 0 chr17 46921623 46921770 -48350881 + B1_Mus2 SINE Alu 1 147 0 1 942 209 230 0 123 chr17 46921770 46921797 -48350854 + A-rich Low_complexity Low_complexity 23 47 0 1 942 1308 69 69 0 chr17 46921797 46921971 -48350680 + B2_Mm1a SINE B2 2 187 -6 1 942 209 230 0 123 chr17 46921971 46921982 -48350669 + A-rich Low_complexity Low_complexity 48 53 0 1 942 1128 95 0 0 chr17 46921982 46922129 -48350522 + B1_Mus1 SINE Alu 2 148 0 1 942 1676 16 0 30 chr17 46922130 46922328 -48350323 + B2_Mm1a SINE B2 2 193 0 1 942 209 230 0 123 chr17 46922328 46922375 -48350276 + A-rich Low_complexity Low_complexity 54 100 0 1 942 1260 98 38 0 chr17 46922385 46922569 -48350082 + B2_Mm2 SINE B2 1 191 -4 1 942 917 37 0 0 chr17 46922666 46922775 -48349876 + B2_Mm1t SINE B2 1 109 -84 1 942 519 17 0 0 chr17 46922775 46922835 -48349816 + (TAAA)n Simple_repeat Simple_repeat 4 63 0 1 942 1331 66 61 0 chr17 46922849 46923030 -48349621 + B2_Mm1t SINE B2 2 193 0 1 942 654 314 60 19 chr17 46923154 46923423 -48349228 + LTRIS4 LTR ERV1 228 507 0 1 942 1158 42 14 7 chr17 46923479 46923624 -48349027 + B1_Mus2 SINE Alu 2 147 0 1 943 952 141 0 0 chr17 46923794 46923936 -48348715 - B1_Mur4 SINE Alu 0 150 9 1 943 794 274 35 62 chr17 46923990 46924363 -48348288 + RodERV21-int LTR ERV1 1003 1365 -3626 1 943 1080 103 14 0 chr17 46924364 46924509 -48348142 + B1_Mus2 SINE Alu 1 147 0 1 943 884 162 22 34 chr17 46924535 46924714 -48347937 - RLTR23 LTR ERV1 -1 429 253 1 943 3673 149 68 32 chr17 46924726 46925703 -48346948 + RLTR13D1 LTR ERVK 1 998 -25 1 943 332 110 0 180 chr17 46925710 46925810 -48346841 - RLTR23 LTR ERV1 -171 259 178 1 943 1014 72 235 7 chr17 46925823 46925976 -48346675 - B2_Mm2 SINE B2 -7 188 1 1 943 1133 69 21 0 chr17 46926037 46926181 -48346470 + B1_Mus1 SINE Alu 2 148 0 1 943 358 216 34 11 chr17 46926255 46926344 -48346307 + RodERV21-int LTR ERV1 1430 1520 -3471 1 943 3478 230 60 22 chr17 46926392 46926809 -48345842 + RodERV21-int LTR ERV1 1825 2279 -2712 1 943 3681 82 100 6 chr17 46926809 46927327 -48345324 - RMER2 LTR ERV1 0 567 1 1 943 3478 230 60 22 chr17 46927327 46927764 -48344887 + RodERV21-int LTR ERV1 2280 2711 -2280 1 943 815 237 45 14 chr17 46928108 46928330 -48344321 + RLTR42-int LTR ERVK 1105 1333 -4189 1 943 671 149 25 147 chr17 46928420 46928577 -48344074 + B1_Mur2 SINE Alu 1 138 -11 1 943 183 80 0 0 chr17 46928577 46928602 -48344049 + (CAAG)n Simple_repeat Simple_repeat 2 26 0 1 943 516 196 62 22 chr17 46928603 46928785 -48343866 + B3 SINE B2 1 195 0 1 943 343 67 0 0 chr17 46928962 46929007 -48343644 + RodERV21-int LTR ERV1 3226 3270 -1721 1 943 2823 195 143 22 chr17 46929026 46929698 -48342953 + RLTR25B LTR ERVK 276 1028 0 1 943 6363 176 63 40 chr17 46929701 46929867 -48342784 + RodERV21-int LTR ERV1 3275 3460 -1531 1 943 2030 149 93 27 chr17 46929867 46930233 -48342418 - ORR1B1 LTR MaLR 0 394 5 1 943 6363 176 63 40 chr17 46930233 46930301 -48342350 + RodERV21-int LTR ERV1 3461 3504 -1487 1 943 502 104 237 10 chr17 46930301 46930398 -48342253 - PB1D9 SINE Alu 0 120 2 1 943 6363 176 63 40 chr17 46930398 46931533 -48341118 + RodERV21-int LTR ERV1 3505 4677 -314 1 943 243 242 0 0 chr17 46931537 46931599 -48341052 + CT-rich Low_complexity Low_complexity 3 64 0 1 943 725 79 254 0 chr17 46931599 46931713 -48340938 - B1_Mus1 SINE Alu 0 148 6 1 943 635 0 13 0 chr17 46931716 46931791 -48340860 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 1 943 1128 76 0 27 chr17 46931800 46931811 -48340840 - B1_Mus1 SINE Alu -1 147 137 1 943 1263 82 0 0 chr17 46931811 46932018 -48340633 + (TTTC)n Simple_repeat Simple_repeat 1 207 0 1 943 1128 76 0 27 chr17 46932018 46932154 -48340497 - B1_Mus1 SINE Alu -12 136 4 1 943 697 189 106 6 chr17 46932155 46932173 -48340478 + RodERV21-int LTR ERV1 4647 4664 -327 1 943 943 77 248 13 chr17 46932173 46932330 -48340321 - B2_Mm2 SINE B2 0 195 2 1 943 697 189 106 6 chr17 46932330 46932471 -48340180 + RodERV21-int LTR ERV1 4665 4822 -169 1 943 373 222 86 0 chr17 46932471 46932552 -48340099 + RMER4B LTR ERVK 339 426 -159 1 943 1160 78 0 0 chr17 46932552 46932693 -48339958 + B1_Mus2 SINE Alu 1 141 -6 1 943 315 0 0 0 chr17 46932696 46932731 -48339920 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 943 328 140 395 18 chr17 46932897 46933006 -48339645 + RMER21B LTR ERV1 347 496 -346 1 943 180 0 0 0 chr17 46933006 46933026 -48339625 + (T)n Simple_repeat Simple_repeat 1 20 0 1 943 783 182 110 21 chr17 46933546 46933737 -48338914 - B3 SINE B2 -1 215 8 1 943 492 271 78 48 chr17 46933817 46933984 -48338667 - B3 SINE B2 -44 172 1 1 943 588 318 31 21 chr17 46934206 46934399 -48338252 - ID_B1 SINE B4 -4 220 26 1 943 26 0 0 0 chr17 46934515 46934541 -48338110 + GC_rich Low_complexity Low_complexity 1 26 0 1 943 25 51 0 0 chr17 46935216 46935255 -48337396 + AT_rich Low_complexity Low_complexity 1 39 0 1 943 577 245 0 0 chr17 46936360 46936466 -48336185 - PB1D10 SINE Alu -9 108 3 1 943 268 271 219 8 chr17 46939757 46939880 -48332771 + B1F SINE Alu 1 149 0 1 943 1303 27 0 0 chr17 46939889 46940036 -48332615 + B1_Mm SINE Alu 1 147 0 1 943 197 77 51 0 chr17 46940039 46940078 -48332573 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1 943 553 206 10 0 chr17 46940118 46940220 -48332431 + B3 SINE B2 20 122 -94 1 943 983 60 15 0 chr17 46940219 46940352 -48332299 + B1_Mus2 SINE Alu 12 146 -1 1 943 413 165 193 34 chr17 46940381 46940469 -48332182 + B3 SINE B2 113 214 -2 1 943 282 213 61 85 chr17 46940462 46940544 -48332107 + RLTR25B LTR ERVK 430 509 -519 1 943 854 48 0 0 chr17 46940482 46940587 -48332064 + B1_Mm SINE Alu 43 147 0 1 943 913 129 21 7 chr17 46940616 46940756 -48331895 + B1_Mus1 SINE Alu 6 147 -1 1 943 452 311 104 47 chr17 46940922 46941077 -48331574 + B3 SINE B2 1 166 -50 1 943 300 53 0 0 chr17 46941077 46941115 -48331536 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 943 452 311 104 47 chr17 46941115 46941151 -48331500 + B3 SINE B2 167 203 -13 1 943 1306 86 11 0 chr17 46941338 46941513 -48331138 + B2_Mm1t SINE B2 3 179 -14 1 943 409 106 0 5 chr17 46941579 46941644 -48331007 + B2_Mm2 SINE B2 47 109 -107 1 943 441 0 0 0 chr17 46941658 46941707 -48330944 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 1 943 436 200 12 12 chr17 46941870 46941951 -48330700 + PB1 SINE Alu 21 101 -26 1 943 304 264 117 65 chr17 46941987 46942141 -48330510 + RSINE1 SINE B4 4 165 0 1 943 209 57 0 28 chr17 46942174 46942210 -48330441 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1 943 668 23 0 34 chr17 46942212 46942301 -48330350 - B1_Mus2 SINE Alu 0 147 62 1 943 583 29 0 0 chr17 46942296 46942365 -48330286 - B2_Mm2 SINE B2 -61 134 66 1 943 350 310 135 39 chr17 46942517 46942695 -48329956 + B3A SINE B2 1 195 -3 1 943 1267 120 0 26 chr17 46942709 46942898 -48329753 + B2_Mm2 SINE B2 1 184 -11 1 943 470 195 70 9 chr17 46942969 46943083 -48329568 + B1_Mur1 SINE Alu 15 135 -14 1 943 312 232 0 42 chr17 46943791 46943863 -48328788 - B1F SINE Alu -80 69 1 1 943 711 78 68 0 chr17 46943889 46943992 -48328659 + B2_Mm2 SINE B2 85 194 -1 1 943 680 204 0 0 chr17 46944001 46944114 -48328537 - PB1D9 SINE Alu -6 114 2 1 943 1266 41 0 7 chr17 46945601 46945749 -48326902 + B1_Mus2 SINE Alu 1 147 0 1 943 231 46 43 58 chr17 46945752 46945821 -48326830 + (CAAAAA)n Simple_repeat Simple_repeat 3 70 0 1 943 478 236 73 98 chr17 46946068 46946232 -48326419 - RSINE1 SINE B4 -4 161 2 1 943 195 42 0 0 chr17 46946346 46946370 -48326281 + (A)n Simple_repeat Simple_repeat 1 24 0 1 943 258 108 0 0 chr17 46946773 46946810 -48325841 - B1_Mus2 SINE Alu 0 147 111 1 943 883 26 8 17 chr17 46946807 46946924 -48325727 + B1_Mus1 SINE Alu 31 146 -2 1 943 212 54 54 0 chr17 46946928 46946965 -48325686 + (CAAA)n Simple_repeat Simple_repeat 3 41 0 1 943 1072 89 147 6 chr17 46946993 46947163 -48325488 + B2_Mm2 SINE B2 2 195 0 1 943 323 237 0 0 chr17 46947344 46947403 -48325248 - B1_Mur2 SINE Alu -20 129 71 1 943 239 342 25 0 chr17 46947513 46947592 -48325059 + MTEb LTR MaLR 1 81 -298 1 943 345 294 134 38 chr17 46947619 46947819 -48324832 + MTEb LTR MaLR 158 368 -11 1 943 254 250 36 0 chr17 46947887 46947943 -48324708 - ID4 SINE ID -14 69 12 1 943 1189 41 0 52 chr17 46947988 46948143 -48324508 + B1_Mm SINE Alu 1 147 0 1 943 713 261 177 64 chr17 46948159 46948470 -48324181 - MTD LTR MaLR -44 375 30 1 943 269 109 0 21 chr17 46948497 46948544 -48324107 + (TCCG)n Simple_repeat Simple_repeat 3 48 0 1 943 500 245 20 53 chr17 46949054 46949205 -48323446 - B1_Mur1 SINE Alu -1 148 3 1 943 374 0 22 0 chr17 46949841 46949887 -48322764 + (TAA)n Simple_repeat Simple_repeat 1 47 0 1 943 268 85 68 0 chr17 46950058 46950117 -48322534 + T-rich Low_complexity Low_complexity 3 65 0 1 943 183 42 0 0 chr17 46950277 46950301 -48322350 + (CAGA)n Simple_repeat Simple_repeat 4 27 0 1 943 240 149 0 0 chr17 46950337 46950384 -48322267 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 943 1009 24 0 0 chr17 46950487 46950610 -48322041 - B1_Mus2 SINE Alu -13 134 12 1 943 662 70 0 0 chr17 46951144 46951230 -48321421 + B1_Mus2 SINE Alu 1 86 -61 1 943 189 74 0 0 chr17 46951234 46951261 -48321390 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 943 469 105 92 0 chr17 46951308 46951384 -48321267 + ORR1C2 LTR MaLR 1 83 -301 1 943 620 175 193 71 chr17 46951398 46951595 -48321056 + RMER10B LTR ERVL 131 351 -47 1 943 22 0 0 0 chr17 46951597 46951619 -48321032 + AT_rich Low_complexity Low_complexity 1 22 0 1 943 535 221 7 97 chr17 46951784 46951802 -48320849 - ID_B1 SINE B4 0 224 214 1 943 201 74 0 0 chr17 46951802 46951829 -48320822 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 943 535 221 7 97 chr17 46951829 46951965 -48320686 - ID_B1 SINE B4 -11 213 84 1 943 1155 89 0 0 chr17 46951996 46952142 -48320509 - B1_Mus2 SINE Alu 0 147 2 1 943 456 176 244 0 chr17 46952147 46952266 -48320385 - B1F2 SINE Alu 0 149 2 1 943 398 306 6 59 chr17 46952489 46952659 -48319992 + RSINE1 SINE B4 5 165 0 1 943 430 293 12 62 chr17 46953254 46953414 -48319237 + MER5B DNA MER1_type 13 164 -14 1 943 560 152 75 19 chr17 46953762 46953869 -48318782 + PB1D9 SINE Alu 1 113 -7 1 943 265 59 19 38 chr17 46953871 46953924 -48318727 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 1 943 1210 49 0 0 chr17 46953931 46954075 -48318576 - B1_Mus2 SINE Alu -2 145 2 1 943 1592 52 0 0 chr17 46954096 46954289 -48318362 - B2_Mm1a SINE B2 0 193 1 1 943 443 283 56 42 chr17 46955037 46955181 -48317470 - RSINE1 SINE B4 -17 148 3 1 943 1448 49 43 0 chr17 46955188 46955372 -48317279 - B2_Mm1t SINE B2 0 193 2 1 943 702 152 0 43 chr17 46955410 46955527 -48317124 + B1_Mus2 SINE Alu 3 114 -33 1 943 383 206 111 67 chr17 46955490 46955625 -48317026 - B3 SINE B2 -62 154 14 1 943 352 299 23 113 chr17 46956190 46956367 -48316284 - RSINE1 SINE B4 0 165 5 1 943 876 202 25 49 chr17 46956397 46956600 -48316051 + B3A SINE B2 1 198 0 1 943 334 228 75 21 chr17 46957338 46957432 -48315219 - PB1D7 SINE Alu -9 111 13 1 943 542 211 8 31 chr17 46957601 46957728 -48314923 - ID_B1 SINE B4 -15 209 86 1 943 407 263 127 0 chr17 46957957 46958075 -48314576 + B1F SINE Alu 4 136 -13 1 943 1461 47 10 59 chr17 46958075 46958278 -48314373 - B2_Mm2 SINE B2 0 195 3 1 943 808 215 102 10 chr17 46958326 46958523 -48314128 + B3 SINE B2 1 215 -1 1 943 369 0 0 0 chr17 46958627 46958668 -48313983 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 943 422 237 97 0 chr17 46958676 46958790 -48313861 + RSINE1 SINE B4 3 127 -38 1 943 306 0 0 0 chr17 46958801 46958835 -48313816 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 943 854 219 40 10 chr17 46959060 46959258 -48313393 - B3 SINE B2 -10 206 3 1 943 1222 112 56 6 chr17 46959285 46959465 -48313186 - B2_Mm2 SINE B2 -6 189 1 1 943 1445 48 5 60 chr17 46959487 46959686 -48312965 + B2_Mm1a SINE B2 2 189 -4 1 943 1239 48 0 0 chr17 46959716 46959862 -48312789 - B1_Mm SINE Alu 0 147 2 1 943 224 193 121 17 chr17 46960176 46960234 -48312417 - ID4 SINE ID -3 80 17 1 943 417 86 0 0 chr17 46960460 46960518 -48312133 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 943 1491 240 39 42 chr17 46960539 46960739 -48311912 + MTD LTR MaLR 6 201 -218 1 943 1101 88 0 7 chr17 46960739 46960887 -48311764 + B1_Mus2 SINE Alu 1 147 0 1 943 1491 240 39 42 chr17 46960887 46961047 -48311604 + MTD LTR MaLR 202 365 -54 1 943 394 268 118 0 chr17 46961088 46961215 -48311436 - RSINE1 SINE B4 -22 143 2 1 943 251 236 146 0 chr17 46963206 46963261 -48309390 - PB1D10 SINE Alu -3 114 52 1 943 364 295 70 0 chr17 46963387 46963516 -48309135 + B1F SINE Alu 1 138 -11 1 943 471 270 58 0 chr17 46963531 46963668 -48308983 + B1_Mur2 SINE Alu 5 149 0 1 943 751 135 127 0 chr17 46963795 46963921 -48308730 - B1_Mur3 SINE Alu -7 142 1 1 943 826 144 28 14 chr17 46964673 46964814 -48307837 + B1_Mus1 SINE Alu 6 148 0 1 943 486 0 0 0 chr17 46964838 46964892 -48307759 + (GAAA)n Simple_repeat Simple_repeat 1 54 0 1 943 243 301 28 28 chr17 46965197 46965303 -48307348 - B4A SINE B4 -105 187 82 1 943 856 128 6 6 chr17 46965307 46965464 -48307187 + (TTTTC)n Simple_repeat Simple_repeat 2 158 0 1 943 1140 29 14 0 chr17 46965482 46965622 -48307029 + B1_Mm SINE Alu 6 147 0 1 943 1329 118 6 0 chr17 46965631 46965809 -48306842 - B2_Mm1t SINE B2 -14 179 1 1 943 501 183 0 11 chr17 46965811 46965905 -48306746 - B4A SINE B4 -199 93 1 1 943 345 271 185 40 chr17 46965989 46966189 -48306462 + MIRb SINE MIR 39 267 -1 1 943 1260 34 7 0 chr17 46966287 46966433 -48306218 - B1_Mus2 SINE Alu 0 147 1 1 943 408 301 62 7 chr17 46966506 46966650 -48306001 + RSINE1 SINE B4 3 154 -11 1 943 933 78 89 19 chr17 46967396 46967541 -48305110 + B2_Mm2 SINE B2 21 178 -17 1 943 213 39 0 0 chr17 46967541 46967567 -48305084 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1 943 1164 42 7 40 chr17 46967567 46967716 -48304935 - B1_Mus1 SINE Alu -2 146 3 1 943 456 223 19 19 chr17 46968098 46968203 -48304448 + PB1 SINE Alu 5 109 -18 1 943 674 245 7 0 chr17 46968236 46968379 -48304272 + ID_B1 SINE B4 81 224 0 1 943 261 0 0 0 chr17 46968379 46968408 -48304243 + (CAAAAA)n Simple_repeat Simple_repeat 1 29 0 1 943 1194 28 0 53 chr17 46968411 46968563 -48304088 + B1_Mus2 SINE Alu 2 145 -2 1 943 619 234 21 28 chr17 46969875 46970020 -48302631 + B1F SINE Alu 1 144 -5 1 943 501 200 18 35 chr17 46970226 46970340 -48302311 - PB1D9 SINE Alu -5 115 4 1 943 817 277 34 14 chr17 46970515 46970724 -48301927 + B4 SINE B4 57 269 -23 1 943 611 52 36 36 chr17 46970724 46970863 -48301788 + (CA)n Simple_repeat Simple_repeat 2 140 0 1 943 230 316 55 86 chr17 46971297 46971361 -48301290 + B4 SINE B4 25 84 -208 1 943 336 272 106 10 chr17 46971361 46971465 -48301186 + PB1D9 SINE Alu 1 114 -6 1 943 227 241 0 79 chr17 46971654 46971717 -48300934 + RSINE1 SINE B4 76 133 -32 1 943 1312 43 18 0 chr17 46971738 46971901 -48300750 + B2_Mm2 SINE B2 27 192 -3 1 943 21 0 0 0 chr17 46971901 46971922 -48300729 + AT_rich Low_complexity Low_complexity 1 21 0 1 943 1494 45 28 0 chr17 46971923 46972102 -48300549 - B2_Mm1t SINE B2 -9 184 1 1 943 432 308 88 6 chr17 46972108 46972278 -48300373 - B4 SINE B4 -69 223 40 1 943 621 171 0 0 chr17 46972563 46972733 -48299918 + CT-rich Low_complexity Low_complexity 3 172 0 1 943 315 326 156 0 chr17 46972765 46972900 -48299751 - HAL1-3A_ME LINE L1 -419 2439 2284 1 943 207 0 0 0 chr17 46972900 46972923 -48299728 + (TCC)n Simple_repeat Simple_repeat 1 23 0 1 943 973 141 0 11 chr17 46972923 46973103 -48299548 + CT-rich Low_complexity Low_complexity 2 179 0 1 943 703 191 42 7 chr17 46973130 46973272 -48299379 - B1_Mur3 SINE Alu 0 149 3 1 943 566 275 85 0 chr17 46973340 46973529 -48299122 - B3 SINE B2 -11 205 1 1 943 665 212 8 56 chr17 46973619 46973744 -48298907 - B1_Mur2 SINE Alu -1 119 1 1 943 747 177 0 98 chr17 46973767 46973930 -48298721 - B1_Mus2 SINE Alu 0 147 1 1 943 1132 50 0 0 chr17 46973962 46974101 -48298550 + B1_Mus1 SINE Alu 10 148 0 1 943 269 68 23 0 chr17 46974111 46974155 -48298496 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 1 943 352 229 41 97 chr17 46974190 46974335 -48298316 - RSINE1 SINE B4 -27 138 2 1 943 744 277 43 5 chr17 46974335 46974542 -48298109 - ID_B1 SINE B4 -8 216 2 1 943 23 68 0 0 chr17 46974553 46974597 -48298054 + AT_rich Low_complexity Low_complexity 1 44 0 1 943 254 275 64 0 chr17 46975057 46975166 -48297485 - L1MEc LINE L1 -6177 223 108 1 943 390 311 66 0 chr17 46975206 46975357 -48297294 - RSINE1 SINE B4 -2 163 3 1 943 567 315 18 20 chr17 46975601 46975788 -48296863 - B4A SINE B4 -32 192 2 1 943 345 47 0 0 chr17 46975808 46975851 -48296800 + (TAA)n Simple_repeat Simple_repeat 1 43 0 1 943 673 217 54 6 chr17 46975873 46976021 -48296630 + B1F SINE Alu 1 149 0 1 943 223 341 56 22 chr17 46976044 46976134 -48296517 + RSINE1 SINE B4 67 159 -6 1 943 591 188 0 76 chr17 46976388 46976532 -48296119 + B1F2 SINE Alu 1 133 -16 1 943 790 169 7 27 chr17 46976698 46976844 -48295807 - B1_Mur2 SINE Alu -1 148 6 1 943 389 212 23 70 chr17 46977024 46977110 -48295541 + RSINE1 SINE B4 2 83 -82 1 943 851 232 263 20 chr17 46977257 46977561 -48295090 + RLTR30 LTR ERV1 2 379 0 1 943 1258 167 142 90 chr17 46977652 46977962 -48294689 + ORR1C2 LTR MaLR 1 326 -58 1 943 640 131 45 36 chr17 46977958 46978069 -48294582 + B1_Mus1 SINE Alu 24 135 -13 1 943 227 227 0 0 chr17 46978087 46978131 -48294520 + ORR1C2 LTR MaLR 341 384 0 1 943 440 305 157 75 chr17 46978131 46978378 -48294273 + B4 SINE B4 25 292 0 1 943 662 217 14 7 chr17 46978587 46978726 -48293925 + B1F2 SINE Alu 3 142 -7 1 943 659 220 75 8 chr17 46978733 46978866 -48293785 + B1_Mur3 SINE Alu 1 142 -7 1 943 506 301 51 7 chr17 46979214 46979351 -48293300 - RSINE1 SINE B4 -21 144 2 1 943 658 302 431 60 chr17 46979520 46979627 -48293024 + B4A SINE B4 2 151 -141 1 943 195 42 0 0 chr17 46979627 46979651 -48293000 + (CAGA)n Simple_repeat Simple_repeat 4 27 0 1 943 658 219 58 32 chr17 46979651 46979786 -48292865 + B4A SINE B4 152 287 -5 1 943 592 228 171 16 chr17 46979814 46980001 -48292650 + B3 SINE B2 1 216 0 1 943 246 59 0 0 chr17 46980333 46980348 -48292303 + (T)n Simple_repeat Simple_repeat 1 15 0 1 943 1156 83 0 0 chr17 46980348 46980492 -48292159 - B1_Mm SINE Alu 0 147 4 1 943 246 59 0 0 chr17 46980492 46980510 -48292141 + (T)n Simple_repeat Simple_repeat 1 18 0 1 943 733 103 248 0 chr17 46980510 46980627 -48292024 - B1_Mus1 SINE Alu 0 148 3 1 943 362 212 82 0 chr17 46980795 46980880 -48291771 + B1F SINE Alu 13 104 -45 1 943 1415 227 57 34 chr17 46980888 46981239 -48291412 + RLTR18B LTR ERVK 19 377 -135 1 943 201 163 0 0 chr17 46981392 46981441 -48291210 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 1 943 306 268 121 35 chr17 46981485 46981601 -48291050 + RSINE1 SINE B4 1 126 -39 1 943 36 23 0 0 chr17 46981615 46981658 -48290993 + AT_rich Low_complexity Low_complexity 1 43 0 1 943 211 220 80 0 chr17 46981831 46981881 -48290770 - AluF_3 SINE Alu -108 203 150 1 943 290 229 14 14 chr17 46982306 46982377 -48290274 - RSINE1 SINE B4 -13 152 82 1 943 303 329 31 37 chr17 46982383 46982544 -48290107 - B4 SINE B4 -125 167 8 1 943 631 76 22 0 chr17 46982699 46982791 -48289860 + B1_Mus2 SINE Alu 49 142 -5 1 943 359 211 122 31 chr17 46982816 46982914 -48289737 + PB1D10 SINE Alu 1 107 -10 1 943 895 151 80 35 chr17 46982938 46983137 -48289514 + B3 SINE B2 2 209 -7 1 943 278 280 39 26 chr17 46983300 46983311 -48289340 - ID4_ SINE ID 0 83 53 1 943 299 192 19 0 chr17 46983311 46983363 -48289288 - tRNA-Ala-GCY_ tRNA tRNA -11 64 12 1 943 278 280 39 26 chr17 46983363 46983377 -48289274 - ID4_ SINE ID 0 52 6 1 943 260 200 22 0 chr17 46983512 46983557 -48289094 - ID_B1 SINE B4 -34 190 145 1 943 2684 50 56 9 chr17 46983592 46983933 -48288718 + IAPEY2_LTR LTR ERVK 1 357 0 1 943 1181 75 0 20 chr17 46983955 46984105 -48288546 + B1_Mus1 SINE Alu 2 148 0 1 943 183 42 0 0 chr17 46984106 46984130 -48288521 + (A)n Simple_repeat Simple_repeat 1 24 0 1 943 258 302 16 16 chr17 46984130 46984194 -48288457 - PB1D9 SINE Alu -56 64 1 1 943 639 231 50 0 chr17 46985121 46985242 -48287409 + RSINE1 SINE B4 2 128 -37 1 943 195 42 0 0 chr17 46985258 46985282 -48287369 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1 943 510 195 43 34 chr17 46985460 46985577 -48287074 - PB1D9 SINE Alu -1 119 2 1 943 336 268 52 0 chr17 46985752 46985849 -48286802 - MER2 DNA MER2_type -119 226 125 1 943 21 0 0 0 chr17 46985855 46985876 -48286775 + GC_rich Low_complexity Low_complexity 1 21 0 1 943 279 312 70 150 chr17 46985995 46986308 -48286343 - B4A SINE B4 -2 290 3 1 943 510 231 82 7 chr17 46986564 46986699 -48285952 - B1_Mur2 SINE Alu -3 146 2 1 943 222 118 0 0 chr17 46986753 46986787 -48285864 + (A)n Simple_repeat Simple_repeat 1 34 0 1 943 420 177 72 5 chr17 46986829 46986921 -48285730 + B1F SINE Alu 1 94 -53 1 943 546 156 80 61 chr17 46987220 46987339 -48285312 + PB1D9 SINE Alu 2 120 0 1 943 651 154 16 49 chr17 46987400 46987523 -48285128 + B3 SINE B2 97 215 -1 1 943 513 232 62 23 chr17 46987574 46987702 -48284949 + B1F2 SINE Alu 14 146 -3 1 943 1058 53 45 0 chr17 46987985 46988117 -48284534 + B1_Mus1 SINE Alu 1 138 -10 1 943 243 233 98 118 chr17 46988149 46988251 -48284400 - PB1 SINE Alu -25 102 3 1 943 666 218 30 8 chr17 46988435 46988569 -48284082 - B1_Mur1 SINE Alu -8 141 5 1 943 1138 82 135 0 chr17 46989217 46989387 -48283264 - B2_Mm1t SINE B2 0 193 1 1 943 1323 78 50 6 chr17 46989400 46989581 -48283070 - B2_Mm1t SINE B2 -4 189 1 1 943 217 185 259 0 chr17 46990184 46990238 -48282413 + B4 SINE B4 8 75 -217 1 943 204 40 0 0 chr17 46990678 46990703 -48281948 + (T)n Simple_repeat Simple_repeat 1 25 0 1 943 1295 27 0 0 chr17 46990703 46990850 -48281801 - B1_Mm SINE Alu 0 147 1 1 943 269 245 75 84 chr17 46990966 46991073 -48281578 + PB1 SINE Alu 20 125 -2 1 943 193 185 241 0 chr17 46991365 46991419 -48281232 + L2b LINE L2 3231 3297 -78 1 943 338 273 34 11 chr17 46992078 46992167 -48280484 + RSINE1 SINE B4 3 93 -72 1 943 201 224 122 0 chr17 46992543 46992592 -48280059 + MER5A DNA MER1_type 111 165 -24 1 943 1015 95 0 7 chr17 46992959 46993097 -48279554 + B1_Mus1 SINE Alu 2 138 -10 1 943 248 145 0 50 chr17 46993879 46993959 -48278692 + A-rich Low_complexity Low_complexity 1 76 0 1 943 206 241 11 33 chr17 46994491 46994581 -48278070 + (CCCCG)n Simple_repeat Simple_repeat 2 89 0 1 943 221 119 0 23 chr17 46994620 46994663 -48277988 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 943 49 18 0 0 chr17 46994895 46994951 -48277700 + GC_rich Low_complexity Low_complexity 1 56 0 1 943 180 0 0 0 chr17 46995085 46995105 -48277546 + (A)n Simple_repeat Simple_repeat 1 20 0 1 943 227 203 0 17 chr17 46995216 46995276 -48277375 + CT-rich Low_complexity Low_complexity 1 59 0 1 943 207 0 0 0 chr17 46995437 46995460 -48277191 + (CGG)n Simple_repeat Simple_repeat 2 24 0 1 943 27 0 0 0 chr17 46995460 46995487 -48277164 + GC_rich Low_complexity Low_complexity 1 27 0 1 943 39 22 0 0 chr17 46995540 46995586 -48277065 + GC_rich Low_complexity Low_complexity 1 46 0 1 943 41 48 0 0 chr17 46995651 46995713 -48276938 + AT_rich Low_complexity Low_complexity 1 62 0 1 943 342 0 0 0 chr17 46995896 46995934 -48276717 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 943 217 27 81 0 chr17 46997044 46997081 -48275570 + (TATG)n Simple_repeat Simple_repeat 3 42 0 1 943 240 216 38 75 chr17 46997430 46997510 -48275141 + L1MA6 LINE L1 6202 6278 -22 1 943 920 212 93 0 chr17 46998220 46998413 -48274238 - B3 SINE B2 0 216 6 1 943 594 97 164 10 chr17 46998420 46998524 -48274127 - PB1D9 SINE Alu 0 120 1 1 943 391 327 58 13 chr17 46998985 46999140 -48273511 + RSINE1 SINE B4 4 165 0 1 943 552 245 75 75 chr17 46999293 46999452 -48273199 + RSINE1 SINE B4 7 165 0 1 943 216 0 0 0 chr17 46999513 46999537 -48273114 + (T)n Simple_repeat Simple_repeat 1 24 0 1 943 1227 55 0 0 chr17 46999537 46999683 -48272968 - B1_Mus2 SINE Alu 0 147 2 1 943 402 311 31 50 chr17 46999711 46999870 -48272781 + MIRb SINE MIR 65 220 -48 1 943 990 54 0 0 chr17 47000041 47000171 -48272480 - B1_Mus1 SINE Alu 0 148 19 1 943 254 236 28 0 chr17 47000172 47000244 -48272407 - PB1D9 SINE Alu -37 83 10 2 943 661 244 0 0 chr17 47000301 47000436 -48272215 - B1_Mur1 SINE Alu -10 139 5 3 943 339 65 0 0 chr17 47000459 47000505 -48272146 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 943 245 235 20 0 chr17 47000521 47000572 -48272079 - RSINE1 SINE B4 -104 61 10 5 943 256 298 90 22 chr17 47000596 47000730 -48271921 + MIRb SINE MIR 126 268 0 6 943 768 254 26 5 chr17 47000760 47000950 -48271701 + B3A SINE B2 5 198 0 7 943 682 190 0 15 chr17 47000978 47001109 -48271542 + B1_Mur1 SINE Alu 5 135 -14 8 943 305 355 26 35 chr17 47001109 47001223 -48271428 + PB1D10 SINE Alu 3 115 -2 9 943 328 272 65 73 chr17 47001928 47002051 -48270600 + ID_B1 SINE B4 82 203 -21 1 943 225 239 97 54 chr17 47002156 47002249 -48270402 + PB1D7 SINE Alu 22 118 -2 1 943 688 222 87 39 chr17 47002249 47002455 -48270196 + B3 SINE B2 1 216 0 1 943 672 167 71 21 chr17 47002482 47002623 -48270028 + B1_Mur1 SINE Alu 1 148 -1 1 943 356 88 0 17 chr17 47002708 47002766 -48269885 + (AGGGGG)n Simple_repeat Simple_repeat 6 62 0 1 943 906 227 78 60 chr17 47002822 47003103 -48269548 + B4 SINE B4 3 288 -4 1 943 310 143 0 0 chr17 47003127 47003176 -48269475 + HAL1-3A_ME LINE L1 1977 2025 -833 1 943 3567 66 75 2 chr17 47003188 47003692 -48268959 + L1_Mus3 LINE L1 6086 6626 -12 1 943 600 267 102 5 chr17 47004717 47004913 -48267738 + ID_B1 SINE B4 2 216 -8 1 943 244 260 62 49 chr17 47005044 47005125 -48267526 - ID4 SINE ID 0 83 2 1 943 246 128 0 0 chr17 47005181 47005220 -48267431 + (CACCAT)n Simple_repeat Simple_repeat 6 44 0 2 943 558 244 0 0 chr17 47005252 47005379 -48267272 - RSINE1 SINE B4 -28 137 11 2 943 888 58 67 80 chr17 47005637 47005787 -48266864 + B1_Mus1 SINE Alu 1 148 0 2 943 243 0 0 0 chr17 47005810 47005837 -48266814 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 943 1064 62 0 7 chr17 47005845 47005991 -48266660 + (GAAA)n Simple_repeat Simple_repeat 3 147 0 2 943 909 124 14 0 chr17 47006348 47006493 -48266158 + B1_Mus2 SINE Alu 1 147 0 2 943 435 38 0 0 chr17 47006717 47006770 -48265881 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 943 189 0 0 0 chr17 47006864 47006885 -48265766 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 2 943 1130 106 0 0 chr17 47006885 47007046 -48265605 - B2_Mm2 SINE B2 -34 161 1 2 943 809 55 0 0 chr17 47007132 47007241 -48265410 - B1_Mus1 SINE Alu 0 148 40 2 943 634 239 114 0 chr17 47007244 47007420 -48265231 - B3 SINE B2 -18 198 3 3 943 210 97 0 0 chr17 47007785 47007849 -48264802 + (TGGA)n Simple_repeat Simple_repeat 1 64 0 3 943 696 218 0 0 chr17 47007850 47008029 -48264622 + (TGGG)n Simple_repeat Simple_repeat 2 180 0 3 943 385 123 0 0 chr17 47008350 47008407 -48264244 - B1_Mur3 SINE Alu -15 134 78 3 943 1065 156 16 10 chr17 47008420 47008614 -48264037 - B2_Mm2 SINE B2 0 195 1 3 943 1179 27 0 7 chr17 47008634 47008782 -48263869 - B1_Mus2 SINE Alu 0 147 1 3 943 1006 221 9 0 chr17 47008793 47009006 -48263645 - B3 SINE B2 0 216 2 3 943 310 338 116 6 chr17 47009300 47009346 -48263305 + B4 SINE B4 27 90 -202 3 943 434 282 18 23 chr17 47009346 47009477 -48263174 + B1_Mur1 SINE Alu 2 127 -20 3 943 439 289 82 65 chr17 47009491 47009661 -48262990 + B3A SINE B2 39 211 -5 3 943 887 143 13 13 chr17 47009689 47009838 -48262813 + B1_Mur4 SINE Alu 2 150 0 4 943 291 239 0 0 chr17 47009854 47009921 -48262730 + B4A SINE B4 216 282 -10 3 943 946 206 49 20 chr17 47010084 47010287 -48262364 - B3 SINE B2 0 216 8 4 943 505 236 0 9 chr17 47010332 47010439 -48262212 - PB1D7 SINE Alu -13 107 2 4 943 508 149 194 24 chr17 47010715 47010839 -48261812 + B1_Mm SINE Alu 2 146 -1 4 943 408 170 0 175 chr17 47011960 47012018 -48260633 - PB1D7 SINE Alu -18 102 64 4 943 1076 82 7 0 chr17 47012018 47012165 -48260486 - B1_Mus1 SINE Alu 0 148 1 4 943 408 170 0 175 chr17 47012165 47012220 -48260431 - PB1D7 SINE Alu -57 63 9 4 943 265 206 37 0 chr17 47012168 47012236 -48260415 - B4A SINE B4 -147 145 74 4 943 758 284 125 4 chr17 47012376 47012616 -48260035 - B4 SINE B4 -15 277 9 4 943 970 130 20 56 chr17 47012670 47012866 -48259785 + B2_Mm2 SINE B2 2 190 -5 4 943 482 175 41 0 chr17 47012885 47012982 -48259669 + MT2B LTR ERVL 1 101 -432 4 943 886 56 3 4 chr17 47012971 47013107 -48259544 - B1_Mus1 SINE Alu -1 149 15 5 943 408 237 83 17 chr17 47013001 47013121 -48259530 - B4 SINE B4 -84 208 81 5 943 848 233 92 66 chr17 47013147 47013549 -48259102 + MT2B LTR ERVL 73 601 0 4 943 388 288 37 56 chr17 47013650 47013812 -48258839 - RSINE1 SINE B4 -6 159 1 5 943 291 211 26 13 chr17 47013945 47014022 -48258629 + PB1D10 SINE Alu 40 117 0 5 943 686 281 78 5 chr17 47014042 47014246 -48258405 + B4A SINE B4 9 227 -65 5 943 407 269 119 73 chr17 47014248 47014509 -48258142 + B4 SINE B4 2 274 -18 5 943 433 210 260 20 chr17 47014549 47014695 -48257956 + B3A SINE B2 2 182 -16 5 943 1535 143 21 120 chr17 47014706 47015083 -48257568 + ORR1B1 LTR MaLR 1 386 -8 5 943 353 183 110 0 chr17 47015123 47015205 -48257446 + B1_Mur4 SINE Alu 50 140 -10 5 943 481 276 0 0 chr17 47015343 47015459 -48257192 + ID_B1 SINE B4 108 223 -1 5 943 242 287 36 98 chr17 47015843 47015955 -48256696 + RMER4B LTR ERVK 450 554 -31 6 943 411 113 0 0 chr17 47015955 47016017 -48256634 + (GGGA)n Simple_repeat Simple_repeat 4 65 0 6 943 325 197 14 0 chr17 47016072 47016143 -48256508 + L1_Mus1 LINE L1 6486 6557 -10 6 943 1117 55 0 0 chr17 47016143 47016279 -48256372 + B1_Mm SINE Alu 2 137 -10 6 943 195 0 86 0 chr17 47016279 47016314 -48256337 + (CAA)n Simple_repeat Simple_repeat 2 39 0 6 943 531 0 0 0 chr17 47016337 47016396 -48256255 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 6 943 364 222 109 18 chr17 47016400 47016510 -48256141 + RSINE1 SINE B4 3 122 -43 6 943 531 260 62 8 chr17 47016576 47016704 -48255947 + RSINE1 SINE B4 2 136 -29 6 943 254 342 55 69 chr17 47016907 47017124 -48255527 + ORR1E LTR MaLR 94 307 -52 6 943 464 194 10 10 chr17 47017210 47017314 -48255337 + B1_Mur1 SINE Alu 45 148 -1 6 943 294 29 0 0 chr17 47017480 47017515 -48255136 + (A)n Simple_repeat Simple_repeat 1 35 0 7 943 230 277 205 0 chr17 47017522 47017605 -48255046 + PB1D10 SINE Alu 2 101 -16 7 943 809 161 0 32 chr17 47017714 47017765 -48254886 + polypurine Low_complexity Low_complexity 1 50 0 7 943 1196 34 0 38 chr17 47017765 47017950 -48254701 + (GAA)n Simple_repeat Simple_repeat 3 180 0 7 943 809 161 0 32 chr17 47017950 47018084 -48254567 + polypurine Low_complexity Low_complexity 51 180 0 7 943 697 249 16 22 chr17 47018132 47018317 -48254334 + B3A SINE B2 9 192 -6 7 943 345 307 202 4 chr17 47018797 47019039 -48253612 + B4A SINE B4 3 292 0 7 943 345 224 250 0 chr17 47019739 47019855 -48252796 + B1F SINE Alu 2 146 -3 7 943 227 353 15 0 chr17 47019860 47019928 -48252723 + ID4_ SINE ID 8 76 -7 7 943 373 302 16 67 chr17 47020997 47021166 -48251485 + B4A SINE B4 24 179 -113 7 943 445 217 0 21 chr17 47021211 47021305 -48251346 + RSINE1 SINE B4 49 140 -25 8 943 255 176 0 0 chr17 47021317 47021368 -48251283 + B3A SINE B2 1 51 -147 8 943 257 89 0 22 chr17 47021389 47021435 -48251216 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 943 802 170 14 0 chr17 47021469 47021616 -48251035 + B1_Mur4 SINE Alu 1 149 -1 8 943 286 160 0 0 chr17 47021663 47021713 -48250938 + B3A SINE B2 6 55 -143 8 943 411 38 0 0 chr17 47021715 47021768 -48250883 + (TTCC)n Simple_repeat Simple_repeat 3 55 0 8 943 865 100 21 28 chr17 47021768 47021912 -48250739 - B1_Mur4 SINE Alu -5 145 3 8 943 303 169 17 0 chr17 47021913 47021972 -48250679 + B3 SINE B2 49 108 -108 8 943 908 127 113 6 chr17 47022019 47022178 -48250473 - B2_Mm2 SINE B2 -18 177 2 8 943 21 57 0 0 chr17 47022181 47022216 -48250435 + AT_rich Low_complexity Low_complexity 1 35 0 8 943 440 240 102 78 chr17 47022543 47022569 -48250082 - B2_Mm2 SINE B2 -24 171 146 8 943 345 24 0 0 chr17 47022569 47022611 -48250040 + (CA)n Simple_repeat Simple_repeat 2 43 0 9 943 651 221 36 0 chr17 47022611 47022751 -48249900 - B3A SINE B2 -53 145 1 9 943 475 190 153 24 chr17 47023534 47023591 -48249060 - B1F SINE Alu 0 149 93 9 943 1116 55 7 20 chr17 47023591 47023740 -48248911 - B1_Mm SINE Alu 0 147 1 9 943 475 190 153 24 chr17 47023740 47023806 -48248845 - B1F SINE Alu -57 92 10 9 943 277 242 0 16 chr17 47023754 47023817 -48248834 - B4A SINE B4 -146 146 85 9 943 643 228 152 0 chr17 47023851 47024035 -48248616 + B3 SINE B2 1 212 -4 9 943 800 169 34 18 chr17 47024063 47024250 -48248401 + B3 SINE B2 1 193 -2 9 943 1124 43 0 7 chr17 47024321 47024463 -48248188 + B1_Mus2 SINE Alu 2 142 -5 9 943 291 238 48 36 chr17 47024520 47024603 -48248048 + RSINE1 SINE B4 69 152 -13 9 943 401 129 94 0 chr17 47025318 47025408 -48247243 - B1_Mur3 SINE Alu -17 132 14 9 943 658 216 63 29 chr17 47025548 47025753 -48246898 + B3 SINE B2 5 216 0 1 943 198 167 0 0 chr17 47027027 47027063 -48245588 + GA-rich Low_complexity Low_complexity 1 36 0 1 943 201 74 0 0 chr17 47027369 47027396 -48245255 + (A)n Simple_repeat Simple_repeat 1 27 0 1 943 235 206 143 0 chr17 47029197 47029260 -48243391 - PB1D9 SINE Alu -7 113 42 1 943 277 242 205 16 chr17 47029436 47029558 -48243093 - B1F SINE Alu 0 149 5 1 943 230 286 39 48 chr17 47029770 47029873 -48242778 - PB1D9 SINE Alu 0 120 19 1 943 234 250 21 49 chr17 47030376 47030413 -48242238 + MTE-int LTR MaLR 615 647 -862 1 943 816 146 8 0 chr17 47030413 47030543 -48242108 + B1_Mus1 SINE Alu 1 131 -17 1 943 1048 76 14 0 chr17 47030570 47030715 -48241936 - B1_Mus2 SINE Alu 0 147 1 1 943 534 233 72 13 chr17 47031005 47031157 -48241494 + MTE-int LTR MaLR 769 929 -651 1 943 1192 34 0 0 chr17 47032296 47032442 -48240209 - B1_Mus2 SINE Alu 0 147 2 1 943 227 257 41 81 chr17 47032850 47032973 -48239678 + B4 SINE B4 109 226 -66 1 943 460 230 26 17 chr17 47033091 47033206 -48239445 - PB1D10 SINE Alu 0 117 2 1 943 464 259 57 14 chr17 47033379 47033520 -48239131 + B3 SINE B2 65 211 -5 1 943 729 174 35 7 chr17 47033797 47033942 -48238709 + B1_Mur3 SINE Alu 1 149 0 1 943 360 301 128 0 chr17 47034694 47034827 -48237824 - LTR33 LTR ERVL -355 160 11 1 943 2455 155 70 47 chr17 47035052 47035339 -48237312 - MT2B LTR ERVL -71 530 86 1 943 4293 113 32 74 chr17 47035339 47035481 -48237170 - ORR1A3-int LTR MaLR -1164 799 676 1 943 1237 69 23 11 chr17 47035481 47035656 -48236995 + B2_Mm2 SINE B2 1 177 -18 1 943 2455 155 70 47 chr17 47035656 47035739 -48236912 - MT2B LTR ERVL -516 85 6 1 943 4293 113 32 74 chr17 47035739 47036347 -48236304 - ORR1A3-int LTR MaLR -1288 675 1 1 943 598 111 250 0 chr17 47036347 47036455 -48236196 - ORR1A4 LTR MaLR 0 329 195 1 943 346 43 0 336 chr17 47036453 47036486 -48236165 + ORR1A4 LTR MaLR 253 285 -44 1 943 1276 90 21 5 chr17 47036486 47036676 -48235975 + B2_Mm1t SINE B2 1 193 0 1 943 346 43 0 336 chr17 47036676 47036746 -48235905 + ORR1A4 LTR MaLR 286 321 -8 1 943 276 114 0 22 chr17 47036763 47036808 -48235843 - ID4 SINE ID -27 56 13 1 943 594 28 0 0 chr17 47036825 47036897 -48235754 + (TTTC)n Simple_repeat Simple_repeat 1 72 0 1 943 464 230 26 26 chr17 47036902 47037018 -48235633 - PB1D9 SINE Alu 0 120 5 1 943 557 247 161 0 chr17 47037123 47037309 -48235342 - ID_B1 SINE B4 -7 217 2 1 943 441 0 0 0 chr17 47037567 47037616 -48235035 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 943 387 0 0 0 chr17 47037621 47037664 -48234987 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 1 943 1172 57 6 0 chr17 47037664 47037823 -48234828 - B2_Mm1a SINE B2 -33 160 1 1 943 408 274 89 0 chr17 47037999 47038123 -48234528 - RMER5 LTR ERV1 -399 135 1 1 943 880 129 0 33 chr17 47038720 47038872 -48233779 - B1_Mur4 SINE Alu -2 148 2 1 943 206 156 22 0 chr17 47038917 47038962 -48233689 + CT-rich Low_complexity Low_complexity 3 48 0 1 943 1289 82 5 11 chr17 47039073 47039258 -48233393 - B2_Mm1a SINE B2 -8 185 2 1 943 1233 99 11 0 chr17 47039283 47039465 -48233186 - B2_Mm1a SINE B2 -9 184 1 1 943 297 0 0 0 chr17 47039466 47039499 -48233152 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1 943 1170 49 0 0 chr17 47039499 47039643 -48233008 - B1_Mus2 SINE Alu -2 145 2 1 943 776 127 197 55 chr17 47039666 47039849 -48232802 - B3 SINE B2 -6 210 2 1 943 356 345 83 6 chr17 47039974 47040143 -48232508 + MER20 DNA MER1_type 7 188 -31 1 943 29 0 0 0 chr17 47040256 47040285 -48232366 + AT_rich Low_complexity Low_complexity 1 29 0 1 943 829 184 14 0 chr17 47040303 47040450 -48232201 + B1_Mur3 SINE Alu 1 149 0 1 943 357 209 79 35 chr17 47040515 47040629 -48232022 + PB1D9 SINE Alu 2 120 0 1 943 263 275 24 36 chr17 47040712 47040795 -48231856 - RSINE1 SINE B4 -83 82 1 1 943 745 145 38 8 chr17 47041348 47041480 -48231171 + B1_Mur3 SINE Alu 1 136 -13 1 943 270 0 0 0 chr17 47041500 47041530 -48231121 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 943 378 0 0 0 chr17 47041599 47041641 -48231010 + (TAA)n Simple_repeat Simple_repeat 1 42 0 1 943 250 259 247 0 chr17 47041830 47041915 -48230736 - PB1D10 SINE Alu -7 110 5 1 943 21 0 0 0 chr17 47041925 47041946 -48230705 + AT_rich Low_complexity Low_complexity 1 21 0 1 943 336 64 0 0 chr17 47041963 47042010 -48230641 + (TCTG)n Simple_repeat Simple_repeat 4 50 0 1 943 1084 53 147 0 chr17 47042081 47042251 -48230400 + B2_Mm2 SINE B2 1 195 0 1 943 292 195 264 0 chr17 47042304 47042391 -48230260 + B3A SINE B2 45 154 -44 1 943 1143 54 0 0 chr17 47042391 47042538 -48230113 + (CA)n Simple_repeat Simple_repeat 1 147 0 1 943 736 101 8 48 chr17 47042538 47042663 -48229988 - B1_Mus2 SINE Alu -27 120 1 1 943 231 140 0 0 chr17 47042903 47042953 -48229698 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 943 585 210 121 0 chr17 47042953 47043110 -48229541 - B3A SINE B2 -22 176 1 1 943 264 323 31 0 chr17 47043226 47043322 -48229329 + ID_B1 SINE B4 118 216 -8 1 943 1306 64 29 0 chr17 47043363 47043536 -48229115 + B2_Mm1t SINE B2 1 178 -15 1 943 342 0 0 0 chr17 47043536 47043574 -48229077 + (GA)n Simple_repeat Simple_repeat 1 38 0 1 943 760 192 60 6 chr17 47043710 47043878 -48228773 - B2_Mm2 SINE B2 -17 178 2 1 943 24 53 0 0 chr17 47044040 47044078 -48228573 + AT_rich Low_complexity Low_complexity 1 38 0 1 943 329 208 56 3 chr17 47044141 47044224 -48228427 - B3 SINE B2 -69 126 29 1 943 240 35 0 0 chr17 47044224 47044253 -48228398 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 943 1065 65 0 0 chr17 47044253 47044391 -48228260 - B1_Mus1 SINE Alu -8 140 3 1 943 1465 42 0 77 chr17 47044395 47044603 -48228048 - B2_Mm1t SINE B2 -1 192 1 1 943 735 190 42 0 chr17 47044617 47044759 -48227892 - B1_Mus1 SINE Alu 0 148 1 1 943 544 255 0 0 chr17 47044786 47044931 -48227720 + RMER1C Other Other 1198 1342 0 1 943 350 253 143 0 chr17 47045012 47045166 -48227485 + B4A SINE B4 1 176 -116 1 943 758 161 0 62 chr17 47045353 47045499 -48227152 + B1_Mur2 SINE Alu 6 142 -7 1 943 369 0 0 0 chr17 47045518 47045559 -48227092 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 943 606 225 11 81 chr17 47045581 47045755 -48226896 + B3A SINE B2 34 195 -3 1 943 820 43 165 0 chr17 47045771 47045886 -48226765 + B1_Mus2 SINE Alu 1 134 -13 1 943 225 0 0 0 chr17 47045886 47045911 -48226740 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1 943 280 164 55 82 chr17 47045927 47046000 -48226651 + PB1D10 SINE Alu 45 115 -2 1 943 1406 50 39 0 chr17 47046102 47046282 -48226369 + B2_Mm2 SINE B2 1 187 -8 1 943 203 179 0 0 chr17 47046509 47046548 -48226103 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 1 943 674 211 7 20 chr17 47046595 47046745 -48225906 + B1_Mur1 SINE Alu 1 148 -1 1 943 732 153 23 0 chr17 47046809 47046940 -48225711 - B1_Mus1 SINE Alu -9 139 6 1 943 921 235 10 0 chr17 47046960 47047160 -48225491 - B3 SINE B2 -14 202 1 1 943 25 0 0 0 chr17 47048869 47048894 -48223757 + AT_rich Low_complexity Low_complexity 1 25 0 1 943 598 213 73 0 chr17 47048894 47049030 -48223621 - B1_Mur2 SINE Alu -1 148 3 1 943 495 0 0 0 chr17 47049796 47049851 -48222800 + (TCCC)n Simple_repeat Simple_repeat 1 55 0 1 943 1279 315 90 15 chr17 47049859 47050449 -48222202 - Lx8 LINE L1 -128 7345 6712 1 943 267 228 0 0 chr17 47050469 47050526 -48222125 - ID4 SINE ID -23 60 4 1 943 858 151 0 27 chr17 47050559 47050743 -48221908 + C-rich Low_complexity Low_complexity 1 179 0 1 943 349 273 133 0 chr17 47050993 47051121 -48221530 + RSINE1 SINE B4 2 146 -19 1 943 399 186 174 0 chr17 47051297 47051383 -48221268 + B1_Mus2 SINE Alu 47 147 0 1 943 192 97 0 0 chr17 47051387 47051418 -48221233 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 943 1157 63 0 12 chr17 47051615 47051775 -48220876 + (TATG)n Simple_repeat Simple_repeat 2 159 0 1 943 543 286 45 6 chr17 47053090 47053163 -48219488 + ID SINE ID 8 87 -137 1 943 275 268 79 24 chr17 47053163 47053289 -48219362 + B1F SINE Alu 1 133 -16 1 943 217 27 53 26 chr17 47054286 47054324 -48218327 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 943 1209 27 7 0 chr17 47054326 47054472 -48218179 - B1_Mus2 SINE Alu 0 147 1 1 944 300 289 12 62 chr17 47054873 47054954 -48217697 + RSINE1 SINE B4 83 159 -6 1 944 396 103 0 0 chr17 47054994 47055052 -48217599 + (TAA)n Simple_repeat Simple_repeat 2 59 0 1 944 544 279 52 0 chr17 47055454 47055608 -48217043 - RSINE1 SINE B4 -1 164 3 1 944 269 169 68 0 chr17 47055694 47055753 -48216898 - B4 SINE B4 -6 286 224 1 944 251 122 0 20 chr17 47055763 47055813 -48216838 + (TCC)n Simple_repeat Simple_repeat 2 50 0 1 944 254 210 203 31 chr17 47055816 47055880 -48216771 - B4 SINE B4 -81 211 137 1 944 518 248 45 0 chr17 47055979 47056112 -48216539 - ID_B1 SINE B4 -2 222 84 1 944 184 337 202 0 chr17 47056528 47056617 -48216034 + L2a LINE L2 3290 3396 -30 1 944 387 269 130 0 chr17 47057040 47057148 -48215503 - ID_B1 SINE B4 -15 209 88 1 944 427 245 29 19 chr17 47057150 47057254 -48215397 - PB1D10 SINE Alu -10 107 3 1 944 800 178 0 15 chr17 47057331 47057468 -48215183 - B1_Mur2 SINE Alu 0 149 15 1 944 249 250 18 99 chr17 47057478 47057589 -48215062 - L1MB5 LINE L1 -66 6108 6007 2 944 294 129 0 0 chr17 47058076 47058138 -48214513 + (A)n Simple_repeat Simple_repeat 1 62 0 2 944 967 216 29 0 chr17 47059302 47059506 -48213145 - B3 SINE B2 -6 210 1 2 944 866 185 7 20 chr17 47059517 47059666 -48212985 - B1_Mur2 SINE Alu 0 149 3 2 944 204 97 0 0 chr17 47059696 47059727 -48212924 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 944 605 239 60 0 chr17 47059747 47059881 -48212770 - RSINE1 SINE B4 -21 144 3 2 944 518 260 23 83 chr17 47061928 47062101 -48210550 + ID_B1 SINE B4 61 220 -4 2 944 577 302 24 77 chr17 47062115 47062323 -48210328 + B3A SINE B2 2 198 0 2 944 1062 108 14 0 chr17 47062332 47062471 -48210180 + B1_Mur4 SINE Alu 1 141 -9 2 944 374 211 40 0 chr17 47062908 47062984 -48209667 - B1_Mur1 SINE Alu -5 144 66 2 944 792 199 22 0 chr17 47062999 47063135 -48209516 - B1_Mur1 SINE Alu 0 149 11 2 944 487 255 19 96 chr17 47063135 47063154 -48209497 - ID_B1 SINE B4 -1 222 80 2 944 1055 71 50 0 chr17 47063496 47063637 -48209014 - B1_Mus1 SINE Alu 0 148 1 2 944 440 253 138 26 chr17 47063978 47064173 -48208478 - ID_B1 SINE B4 -6 218 2 2 944 362 266 115 13 chr17 47064285 47064441 -48208210 + L1ME1 LINE L1 5993 6164 -15 2 944 690 136 156 23 chr17 47064473 47064601 -48208050 + B1_Mur4 SINE Alu 5 149 -1 2 944 189 0 0 0 chr17 47064605 47064626 -48208025 + (CCAA)n Simple_repeat Simple_repeat 2 22 0 2 944 591 27 0 0 chr17 47064629 47064702 -48207949 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 2 944 292 262 35 59 chr17 47065616 47065701 -48206950 - BC1_Mm scRNA scRNA -58 94 12 2 944 459 92 0 0 chr17 47066384 47066449 -48206202 + (CAGGG)n Simple_repeat Simple_repeat 5 69 0 2 944 419 263 77 42 chr17 47066473 47066616 -48206035 - B1F SINE Alu 0 149 2 2 944 1041 89 0 0 chr17 47067563 47067709 -48204942 + (CA)n Simple_repeat Simple_repeat 2 147 0 2 944 237 281 96 52 chr17 47068443 47068578 -48204073 - RSINE1 SINE B4 -22 143 3 2 944 587 296 155 25 chr17 47068650 47068889 -48203762 - B4A SINE B4 -9 283 14 2 944 323 316 50 50 chr17 47068971 47069091 -48203560 - B4A SINE B4 -4 288 169 2 944 299 206 15 0 chr17 47069125 47069193 -48203458 - B4 SINE B4 -221 71 3 2 944 3510 153 119 7 chr17 47069668 47070348 -48202303 + RMER6A LTR ERVK 1 756 0 2 944 491 242 61 135 chr17 47070632 47070780 -48201871 - B3A SINE B2 -11 184 48 2 944 1113 214 196 3 chr17 47071520 47071816 -48200835 + MTD LTR MaLR 51 403 -16 2 944 1153 36 50 0 chr17 47071929 47072068 -48200583 + B1_Mus2 SINE Alu 2 147 0 2 944 901 171 11 50 chr17 47072094 47072273 -48200378 + B2_Mm2 SINE B2 2 173 -22 2 944 450 211 66 19 chr17 47072948 47073054 -48199597 + RSINE1 SINE B4 55 165 0 2 944 207 0 0 0 chr17 47073807 47073830 -48198821 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 944 387 0 0 0 chr17 47073889 47073932 -48198719 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 944 1914 140 114 9 chr17 47074121 47074453 -48198198 + ORR1B2 LTR MaLR 1 367 0 2 944 1423 62 11 0 chr17 47074613 47074790 -48197861 + B2_Mm1t SINE B2 1 179 -14 2 944 456 94 244 49 chr17 47074815 47074938 -48197713 + B2_Mm2 SINE B2 47 193 -2 2 944 249 163 0 0 chr17 47075708 47075751 -48196900 - B1F1 SINE Alu -94 55 13 2 944 221 296 0 66 chr17 47075751 47075784 -48196867 - B4 SINE B4 -152 140 70 2 944 730 108 82 8 chr17 47075979 47076101 -48196550 - B1_Mur4 SINE Alu -8 142 12 2 944 209 119 24 0 chr17 47076428 47076470 -48196181 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 2 944 861 179 21 0 chr17 47076471 47076616 -48196035 - B1_Mur2 SINE Alu 0 149 2 2 944 266 202 141 12 chr17 47077068 47077153 -48195498 + RSINE1 SINE B4 69 164 -1 2 944 24 0 0 0 chr17 47077172 47077196 -48195455 + AT_rich Low_complexity Low_complexity 1 24 0 2 944 579 269 82 67 chr17 47077242 47077437 -48195214 + B3A SINE B2 1 198 0 2 944 397 267 8 33 chr17 47077759 47077879 -48194772 - PB1D9 SINE Alu -2 118 2 2 944 246 295 22 33 chr17 47078319 47078330 -48194321 + MT2B LTR ERVL 152 161 -440 2 944 452 151 70 0 chr17 47078330 47078416 -48194235 + PB1D9 SINE Alu 1 92 -28 2 944 467 288 92 43 chr17 47078815 47079000 -48193651 - B4A SINE B4 -6 286 93 2 944 1142 62 7 0 chr17 47079388 47079533 -48193118 - B1_Mm SINE Alu -1 146 1 2 944 306 267 58 15 chr17 47080790 47080927 -48191724 + L1MA4 LINE L1 5787 5929 -371 2 944 1052 90 21 0 chr17 47082195 47082340 -48190311 - B1_Mus1 SINE Alu 0 148 1 2 944 938 249 29 0 chr17 47082400 47082609 -48190042 + B3 SINE B2 2 216 0 2 944 323 226 156 28 chr17 47082769 47082878 -48189773 - B3 SINE B2 -3 213 91 2 944 244 185 106 15 chr17 47083961 47084027 -48188624 + PB1D9 SINE Alu 49 120 0 2 944 1178 75 0 0 chr17 47084427 47084573 -48188078 + B1_Mus2 SINE Alu 2 147 0 2 944 213 217 108 77 chr17 47084632 47084697 -48187954 + ID4 SINE ID 15 81 -2 2 944 775 203 96 5 chr17 47085159 47085347 -48187304 - URR1A DNA MER1_type -19 207 3 2 944 180 125 0 0 chr17 47085677 47085709 -48186942 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 2 944 745 110 33 17 chr17 47085938 47086058 -48186593 - B1_Mus2 SINE Alu -21 126 5 2 944 1856 31 5 0 chr17 47086097 47086319 -48186332 - L1Md_F2 LINE L1 0 6582 6360 2 944 602 205 0 25 chr17 47086336 47086456 -48186195 - PB1D9 SINE Alu -1 119 3 2 944 718 216 131 5 chr17 47086482 47086673 -48185978 - B3 SINE B2 0 216 2 2 944 1092 138 65 27 chr17 47086686 47086706 -48185945 - B2_Mm2 SINE B2 0 195 176 2 944 664 202 151 23 chr17 47086706 47086878 -48185773 - B3A SINE B2 0 198 5 2 944 1092 138 65 27 chr17 47086878 47087043 -48185608 - B2_Mm2 SINE B2 -20 175 3 2 944 265 237 40 0 chr17 47087140 47087216 -48185435 + RSINE1 SINE B4 11 89 -76 2 944 265 237 40 0 chr17 47087213 47087289 -48185362 + RSINE1 SINE B4 11 89 -76 2 944 265 237 40 0 chr17 47087286 47087362 -48185289 + RSINE1 SINE B4 11 89 -76 2 944 258 244 39 0 chr17 47087359 47087424 -48185227 + RSINE1 SINE B4 11 78 -87 2 944 229 259 47 0 chr17 47087424 47087509 -48185142 + RSINE1 SINE B4 1 89 -76 2 944 265 237 40 0 chr17 47087506 47087582 -48185069 + RSINE1 SINE B4 11 89 -76 2 944 258 244 39 0 chr17 47087579 47087644 -48185007 + RSINE1 SINE B4 11 78 -87 2 944 229 259 47 0 chr17 47087644 47087729 -48184922 + RSINE1 SINE B4 1 89 -76 2 944 258 244 39 0 chr17 47087726 47087791 -48184860 + RSINE1 SINE B4 11 78 -87 2 944 215 276 46 0 chr17 47087791 47087867 -48184784 + RSINE1 SINE B4 1 80 -85 2 944 215 271 35 0 chr17 47087867 47087939 -48184712 + RSINE1 SINE B4 4 78 -87 2 944 215 276 46 0 chr17 47087939 47088013 -48184638 + RSINE1 SINE B4 1 78 -87 2 944 222 250 57 0 chr17 47088013 47088087 -48184564 + RSINE1 SINE B4 1 79 -86 2 944 286 236 45 0 chr17 47088087 47088162 -48184489 + RSINE1 SINE B4 1 79 -86 2 944 286 236 45 0 chr17 47088162 47088237 -48184414 + RSINE1 SINE B4 1 79 -86 2 944 286 236 45 0 chr17 47088237 47088312 -48184339 + RSINE1 SINE B4 1 79 -86 2 944 286 250 34 0 chr17 47088312 47088387 -48184264 + RSINE1 SINE B4 1 78 -87 2 944 229 259 47 0 chr17 47088387 47088472 -48184179 + RSINE1 SINE B4 1 89 -76 2 944 265 237 40 0 chr17 47088469 47088545 -48184106 + RSINE1 SINE B4 11 89 -76 2 944 265 237 40 0 chr17 47088542 47088618 -48184033 + RSINE1 SINE B4 11 89 -76 2 944 421 241 65 65 chr17 47088615 47088770 -48183881 + RSINE1 SINE B4 11 165 0 2 944 276 269 201 67 chr17 47088770 47088788 -48183863 + B3 SINE B2 44 205 -11 2 944 767 228 145 11 chr17 47089044 47089230 -48183421 + B3 SINE B2 1 211 -5 2 944 1134 199 20 0 chr17 47090140 47090341 -48182310 - B3 SINE B2 -10 206 2 2 944 452 186 157 0 chr17 47090421 47090523 -48182128 - PB1D9 SINE Alu -1 119 2 2 944 326 247 93 0 chr17 47092569 47092666 -48179985 - PB1D7 SINE Alu -13 107 2 2 944 408 178 120 9 chr17 47093250 47093358 -48179293 - B4 SINE B4 -81 211 92 2 944 543 271 34 20 chr17 47093898 47094045 -48178606 - B1_Mur1 SINE Alu 0 149 1 2 944 614 258 13 0 chr17 47094483 47094634 -48178017 - B4A SINE B4 -2 290 138 2 944 878 155 42 7 chr17 47095274 47095417 -48177234 + B1_Mur2 SINE Alu 2 149 0 2 944 593 253 20 33 chr17 47095430 47095581 -48177070 + B1_Mur1 SINE Alu 1 149 0 2 944 432 0 0 0 chr17 47095676 47095724 -48176927 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 944 360 0 0 0 chr17 47096773 47096813 -48175838 + (TC)n Simple_repeat Simple_repeat 1 40 0 2 944 270 0 0 0 chr17 47096813 47096842 -48175809 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 944 382 224 293 0 chr17 47096991 47097153 -48175498 - B3 SINE B2 -6 210 1 2 944 1245 48 0 7 chr17 47097525 47097672 -48174979 - B1_Mus2 SINE Alu -1 146 1 2 944 315 195 92 0 chr17 47098645 47098732 -48173919 - B1_Mur2 SINE Alu -54 95 1 3 944 537 16 0 0 chr17 47098756 47098818 -48173833 + (TATG)n Simple_repeat Simple_repeat 2 63 0 3 944 383 143 351 0 chr17 47098851 47098928 -48173723 - B3 SINE B2 -86 130 27 3 944 185 265 12 0 chr17 47098988 47099071 -48173580 + GA-rich Low_complexity Low_complexity 1 84 0 3 944 301 174 0 0 chr17 47099086 47099132 -48173519 - B3 SINE B2 -167 49 4 3 944 306 0 0 0 chr17 47099359 47099393 -48173258 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 944 320 289 129 59 chr17 47099403 47099675 -48172976 - B4A SINE B4 0 292 2 3 944 518 173 135 0 chr17 47101218 47101322 -48171329 + B3A SINE B2 1 118 -80 3 944 267 130 0 0 chr17 47101328 47101382 -48171269 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 944 536 259 61 27 chr17 47101505 47101652 -48170999 + RSINE1 SINE B4 2 153 -12 3 944 870 253 5 40 chr17 47102159 47102357 -48170294 + B3A SINE B2 7 197 -1 3 944 832 176 14 14 chr17 47102577 47102721 -48169930 + B1_Mur4 SINE Alu 3 146 -4 3 944 270 0 0 0 chr17 47102723 47102753 -48169898 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 3 944 264 186 0 0 chr17 47104745 47104788 -48167863 - B3 SINE B2 -144 72 30 3 944 347 135 62 13 chr17 47104828 47104903 -48167748 - PB1D9 SINE Alu -26 123 45 3 944 457 214 85 26 chr17 47104924 47105098 -48167553 - B3A SINE B2 -4 191 8 3 944 457 296 35 101 chr17 47105796 47105816 -48166835 - B2_Mm2 SINE B2 -9 186 168 3 944 207 69 0 0 chr17 47105816 47105845 -48166806 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 944 772 267 39 11 chr17 47105845 47106023 -48166628 - B3 SINE B2 -33 183 1 3 944 229 271 12 153 chr17 47106560 47106730 -48165921 - RSINE1 SINE B4 -18 147 2 3 944 278 348 37 37 chr17 47106746 47106907 -48165744 + MLT2D LTR ERVL 216 376 -38 3 944 1396 72 5 35 chr17 47107273 47107473 -48165178 - B2_Mm2 SINE B2 0 195 2 3 944 545 217 0 50 chr17 47107949 47108070 -48164581 - PB1D10 SINE Alu -2 115 1 3 944 203 333 0 16 chr17 47108409 47108473 -48164178 + CT-rich Low_complexity Low_complexity 2 64 0 3 944 375 202 84 0 chr17 47108473 47108579 -48164072 - B1F1 SINE Alu -3 146 1 3 944 335 281 30 23 chr17 47108779 47108910 -48163741 + L1MC LINE L1 3377 3508 -2638 3 944 277 102 17 17 chr17 47108962 47109022 -48163629 + (CAAAA)n Simple_repeat Simple_repeat 3 62 0 3 944 189 418 62 34 chr17 47109559 47109705 -48162946 + MIR SINE MIR 102 251 -11 3 944 198 216 182 39 chr17 47110311 47110388 -48162263 + L2 LINE L2 2744 2831 -588 3 944 195 139 0 0 chr17 47111075 47111111 -48161540 + (A)n Simple_repeat Simple_repeat 1 36 0 3 944 189 74 0 0 chr17 47111196 47111223 -48161428 + (TATG)n Simple_repeat Simple_repeat 1 27 0 3 944 313 364 0 0 chr17 47111224 47111334 -48161317 - PB1D10 SINE Alu -2 115 6 3 944 325 378 22 34 chr17 47111244 47111422 -48161229 - ID_B1 SINE B4 -48 176 1 3 944 450 255 146 66 chr17 47111871 47112022 -48160629 + RSINE1 SINE B4 3 165 0 3 944 837 198 39 30 chr17 47112251 47112454 -48160197 - B3 SINE B2 -11 205 1 3 944 290 279 35 0 chr17 47113169 47113255 -48159396 - B3 SINE B2 -3 213 125 3 944 436 256 0 60 chr17 47113925 47114076 -48158575 - B4 SINE B4 -34 131 2 3 944 1447 69 16 16 chr17 47114461 47114653 -48157998 + B2_Mm2 SINE B2 1 192 -3 3 944 694 49 157 0 chr17 47114672 47114774 -48157877 + B1_Mus2 SINE Alu 23 140 -7 3 944 225 83 0 0 chr17 47114833 47114869 -48157782 + (TCTG)n Simple_repeat Simple_repeat 3 38 0 3 944 310 253 12 25 chr17 47115657 47115738 -48156913 + ID4 SINE ID 2 81 -2 3 944 249 180 0 0 chr17 47115738 47115788 -48156863 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 944 222 301 178 25 chr17 47116202 47116359 -48156292 - B3 SINE B2 -9 207 27 3 944 2098 147 88 3 chr17 47116487 47116875 -48155776 + MTC LTR MaLR 1 421 0 3 944 519 259 80 6 chr17 47118552 47118715 -48153936 - B3A SINE B2 -22 176 2 3 944 225 295 0 0 chr17 47118847 47118908 -48153743 + B4A SINE B4 84 144 -148 3 944 268 260 14 0 chr17 47118863 47118936 -48153715 + B1F1 SINE Alu 15 88 -61 3 944 22 0 0 0 chr17 47120380 47120402 -48152249 + AT_rich Low_complexity Low_complexity 1 22 0 3 944 248 301 54 14 chr17 47120484 47120558 -48152093 - B1_Mus2 SINE Alu -70 77 1 3 944 731 241 12 17 chr17 47120598 47120771 -48151880 - B3 SINE B2 -34 182 11 3 944 508 307 162 19 chr17 47120941 47121261 -48151390 - L1M3 LINE L1 -340 5843 5441 3 944 632 148 37 0 chr17 47122117 47122225 -48150426 + B1_Mus2 SINE Alu 26 137 -10 3 944 461 306 21 4 chr17 47122423 47122570 -48150081 + B3A SINE B2 21 164 -52 3 944 423 0 0 0 chr17 47122575 47122622 -48150029 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 944 558 233 8 8 chr17 47123443 47123564 -48149087 + B1_Mur1 SINE Alu 23 143 -6 3 944 261 0 0 0 chr17 47123979 47124008 -48148643 + (CAAAC)n Simple_repeat Simple_repeat 1 29 0 3 944 816 169 0 0 chr17 47124009 47124139 -48148512 + B1_Mus1 SINE Alu 2 131 -17 3 944 561 152 0 0 chr17 47124168 47124273 -48148378 + GA-rich Low_complexity Low_complexity 4 108 0 3 944 601 191 128 15 chr17 47124417 47124550 -48148101 + B1_Mur4 SINE Alu 2 149 -1 3 944 296 221 46 11 chr17 47125020 47125107 -48147544 + B1_Mm SINE Alu 3 92 -55 3 944 342 266 12 48 chr17 47125123 47125206 -48147445 - RSINE1 SINE B4 -83 82 3 3 944 343 290 65 0 chr17 47125348 47125455 -48147196 + RSINE1 SINE B4 21 134 -31 3 944 478 288 28 35 chr17 47126051 47126195 -48146456 + RSINE1 SINE B4 23 165 0 3 944 1226 35 7 0 chr17 47126373 47126517 -48146134 - B1_Mus1 SINE Alu 0 148 4 3 944 248 140 0 39 chr17 47126592 47126644 -48146007 + (TATG)n Simple_repeat Simple_repeat 2 51 0 3 944 211 89 21 62 chr17 47126638 47126686 -48145965 + (CATA)n Simple_repeat Simple_repeat 2 47 0 3 944 21 36 0 0 chr17 47126708 47126736 -48145915 + AT_rich Low_complexity Low_complexity 1 28 0 3 944 397 305 59 0 chr17 47126859 47126977 -48145674 - B4A SINE B4 0 292 168 3 944 441 291 82 45 chr17 47127033 47127324 -48145327 + RLTR17 LTR ERVK 125 426 -266 3 944 404 217 177 84 chr17 47127686 47127912 -48144739 + B4A SINE B4 46 292 0 3 944 1143 84 0 0 chr17 47129328 47129470 -48143181 - B1_Mus2 SINE Alu -5 142 1 3 944 820 211 62 9 chr17 47129640 47129865 -48142786 - 7SK RNA RNA -94 237 1 3 944 650 274 39 65 chr17 47130101 47130617 -48142034 + RLTR11A2 LTR ERVK 1 504 -24 3 944 587 185 75 8 chr17 47130916 47131036 -48141615 - B1_Mur4 SINE Alu 0 150 23 3 944 257 264 0 112 chr17 47130953 47131051 -48141600 - MT2B LTR ERVL -344 257 171 3 944 1283 70 58 0 chr17 47131431 47131602 -48141049 + B2_Mm2 SINE B2 1 181 -14 3 944 327 164 0 0 chr17 47131634 47131689 -48140962 + B2_Mm2 SINE B2 47 101 -94 3 944 288 0 0 0 chr17 47132632 47132664 -48139987 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 944 480 299 45 0 chr17 47132675 47132809 -48139842 - RSINE1 SINE B4 -21 144 5 3 944 519 254 66 52 chr17 47132830 47133042 -48139609 - B3 SINE B2 -1 215 1 3 944 204 67 0 0 chr17 47133095 47133125 -48139526 + (A)n Simple_repeat Simple_repeat 1 30 0 3 944 317 306 237 53 chr17 47133694 47133922 -48138729 + MER21B LTR ERV1 400 669 -194 3 944 1344 70 32 5 chr17 47134116 47134302 -48138349 - B2_Mm2 SINE B2 -3 192 2 3 944 907 216 45 29 chr17 47134642 47134885 -48137766 + MTEb LTR MaLR 12 258 -121 3 944 276 282 0 0 chr17 47134934 47135005 -48137646 + MT2A LTR ERVL 305 375 -158 3 944 660 231 58 42 chr17 47135491 47135706 -48136945 + L1MC4 LINE L1 6673 6912 -1130 3 944 379 192 13 13 chr17 47136038 47136117 -48136534 + L1MC4 LINE L1 7508 7586 -456 3 944 642 190 48 27 chr17 47136566 47136712 -48135939 - B1_Mur2 SINE Alu 0 149 1 3 944 363 279 103 58 chr17 47137963 47138119 -48134532 + RSINE1 SINE B4 3 165 0 3 944 234 0 0 0 chr17 47138351 47138377 -48134274 + (CAAAA)n Simple_repeat Simple_repeat 4 29 0 3 944 182 260 0 39 chr17 47138425 47138477 -48134174 + L2 LINE L2 2429 2478 -941 3 944 961 118 21 0 chr17 47139029 47139173 -48133478 + B1_Mus1 SINE Alu 2 148 0 3 944 1414 64 26 16 chr17 47139177 47139368 -48133283 + B2_Mm2 SINE B2 2 194 -1 3 944 297 270 0 13 chr17 47139385 47139460 -48133191 + ID_B1 SINE B4 81 154 -70 3 944 790 244 28 23 chr17 47139500 47139714 -48132937 + B3 SINE B2 2 216 0 3 944 560 201 102 22 chr17 47139804 47139941 -48132710 + B1_Mur3 SINE Alu 2 149 0 3 944 462 125 0 0 chr17 47140254 47140334 -48132317 + (CA)n Simple_repeat Simple_repeat 2 81 0 3 944 709 181 14 27 chr17 47140399 47140547 -48132104 - B1_Mm SINE Alu -1 146 1 3 944 228 100 0 0 chr17 47140773 47140813 -48131838 + (CATA)n Simple_repeat Simple_repeat 1 40 0 3 944 496 267 43 75 chr17 47140868 47140973 -48131678 + B3A SINE B2 3 100 -98 3 944 1581 42 5 0 chr17 47140973 47141162 -48131489 - B2_Mm1a SINE B2 -3 190 1 3 944 496 267 43 75 chr17 47141162 47141242 -48131409 + B3A SINE B2 101 182 -16 3 944 223 170 0 0 chr17 47141242 47141289 -48131362 + (CAGA)n Simple_repeat Simple_repeat 3 49 0 3 944 655 167 75 0 chr17 47141317 47141437 -48131214 - B1_Mur1 SINE Alu -15 134 6 4 944 237 304 0 0 chr17 47141482 47141561 -48131090 + ID4 SINE ID 2 80 -3 4 944 418 236 47 0 chr17 47141629 47141756 -48130895 + ID_B1 SINE B4 86 218 -6 4 944 509 203 34 74 chr17 47141962 47142111 -48130540 + B3 SINE B2 74 216 0 4 944 1178 294 99 18 chr17 47142983 47143566 -48129085 + L1MB5 LINE L1 5377 6004 -170 4 944 270 0 0 0 chr17 47143886 47143916 -48128735 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 944 499 295 60 0 chr17 47143949 47144098 -48128553 - B4A SINE B4 -46 246 89 4 944 233 312 0 13 chr17 47144156 47144234 -48128417 - PB1D7 SINE Alu -11 109 33 4 944 401 195 0 12 chr17 47144507 47144590 -48128061 + PB1D10 SINE Alu 2 83 -34 4 944 609 75 11 0 chr17 47144705 47144799 -48127852 + L1_Mus3 LINE L1 6538 6632 -6 4 944 251 245 0 11 chr17 47144845 47144940 -48127711 + (TA)n Simple_repeat Simple_repeat 2 95 0 4 944 535 228 63 0 chr17 47144944 47145078 -48127573 - B1_Mur1 SINE Alu 0 149 1 4 944 245 281 45 79 chr17 47144999 47145088 -48127563 - MT2B LTR ERVL -363 238 153 4 944 199 0 65 0 chr17 47145436 47145467 -48127184 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 4 944 252 0 0 0 chr17 47148190 47148218 -48124433 + (A)n Simple_repeat Simple_repeat 1 28 0 4 944 1171 181 129 17 chr17 47148997 47149284 -48123367 + ORR1D1 LTR MaLR 1 319 -55 4 944 315 272 87 0 chr17 47149377 47149480 -48123171 - PB1D10 SINE Alu -3 114 3 4 944 663 227 21 7 chr17 47149514 47149656 -48122995 - B1_Mur2 SINE Alu -5 144 1 4 944 347 327 97 10 chr17 47149718 47149815 -48122836 - B4A SINE B4 -66 226 127 4 944 967 176 170 49 chr17 47149815 47150180 -48122471 - RLTR9E LTR ERVK 0 409 1 4 944 347 327 97 10 chr17 47150180 47150289 -48122362 - B4A SINE B4 -166 126 2 4 944 290 288 98 0 chr17 47150623 47150755 -48121896 - B1_Mur4 SINE Alu -4 146 2 4 944 654 271 30 69 chr17 47151576 47151940 -48120711 - RLTR15 LTR ERVK -9 350 1 4 944 4718 148 61 27 chr17 47151940 47152842 -48119809 - MYSERV6-int LTR ERVK 0 8959 8027 4 944 21 71 0 0 chr17 47153531 47153573 -48119078 + AT_rich Low_complexity Low_complexity 1 42 0 4 944 1566 270 38 58 chr17 47153986 47154509 -48118142 - MYSERV-int LTR ERVK -973 5577 5062 4 944 1487 60 5 5 chr17 47154509 47154694 -48117957 + B2_Mm1t SINE B2 1 185 -8 4 944 1566 270 38 58 chr17 47154694 47154775 -48117876 - MYSERV-int LTR ERVK -1489 5061 4985 4 944 1164 62 7 0 chr17 47154782 47154926 -48117725 + B1_Mus2 SINE Alu 1 145 -2 4 944 281 109 0 18 chr17 47154929 47154985 -48117666 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 4 944 1241 275 90 76 chr17 47155012 47155202 -48117449 - MYSERV-int LTR ERVK -1626 700 497 4 944 216 86 0 0 chr17 47155202 47155237 -48117414 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 944 1484 259 47 86 chr17 47155237 47155381 -48117270 - MYSERV-int LTR ERVK -1789 4761 4658 4 944 1393 74 21 21 chr17 47155381 47155574 -48117077 - B2_Mm2 SINE B2 -1 194 2 4 944 1484 259 45 87 chr17 47155574 47156057 -48116594 - MYSERV-int LTR ERVK -1893 4657 4166 4 944 1331 133 83 12 chr17 47156072 47156344 -48116307 + RLTR12B LTR ERVK 10 303 -265 4 944 1388 202 0 14 chr17 47156358 47156649 -48116002 + RLTR12B LTR ERVK 242 528 0 4 944 2191 157 23 10 chr17 47156649 47157036 -48115615 - MYSERV6-int LTR ERVK -4582 4377 3986 4 944 2263 222 10 108 chr17 47157036 47157379 -48115272 - RMER19C LTR ERVK 0 611 308 4 944 3277 149 215 0 chr17 47157379 47157984 -48114667 - RMER19A LTR ERVK 0 737 3 4 944 2263 222 10 108 chr17 47157984 47158317 -48114334 - RMER19C LTR ERVK -304 307 1 4 944 9228 176 21 8 chr17 47158318 47160022 -48112629 - MYSERV6-int LTR ERVK -4969 3990 2264 4 944 714 125 0 0 chr17 47160024 47160136 -48112515 + (TTTC)n Simple_repeat Simple_repeat 2 113 0 4 944 1009 52 0 0 chr17 47160146 47160281 -48112370 - B1_Mus1 SINE Alu -6 142 8 4 944 3340 316 40 69 chr17 47160282 47161588 -48111063 - MYSERV6-int LTR ERVK -6685 2274 1021 4 944 2104 113 27 30 chr17 47161588 47161916 -48110735 - ORR1A2 LTR MaLR 0 327 1 4 944 3340 316 40 69 chr17 47161916 47162753 -48109898 - MYSERV6-int LTR ERVK -7939 1020 193 4 944 8417 157 14 15 chr17 47162760 47164503 -48108148 - Lx5 LINE L1 0 7050 5301 4 944 3642 15 0 0 chr17 47164503 47164899 -48107752 - MTA_Mm LTR MaLR 0 396 1 4 944 9274 18 34 0 chr17 47164899 47165961 -48106690 - MTA_Mm-int LTR MaLR 0 1098 1 4 944 3530 30 0 0 chr17 47165961 47166357 -48106294 - MTA_Mm LTR MaLR 0 396 1 4 944 3934 129 8 16 chr17 47166357 47166388 -48106263 - Lx5 LINE L1 -577 5300 5272 4 944 25 0 0 0 chr17 47166468 47166493 -48106158 + AT_rich Low_complexity Low_complexity 1 25 0 4 944 1756 195 108 128 chr17 47166931 47167554 -48105097 + RMER19C LTR ERVK 1 610 -1 4 944 298 243 18 55 chr17 47167575 47167684 -48104967 - RLTR15 LTR ERVK -252 107 3 4 944 442 231 34 8 chr17 47167686 47167804 -48104847 - MYSERV-int LTR ERVK 0 6550 6430 4 944 231 305 59 37 chr17 47167866 47168002 -48104649 + RLTR15 LTR ERVK 43 181 -178 4 944 875 272 93 71 chr17 47168006 47168445 -48104206 - RLTR11B LTR ERVK -4 449 1 4 944 2078 193 15 67 chr17 47168446 47168984 -48103667 - MYSERV-int LTR ERVK -2 6548 6039 4 944 316 323 39 127 chr17 47169134 47169214 -48103437 - RSINE1 SINE B4 0 165 82 4 944 610 283 0 48 chr17 47169214 47169403 -48103248 - B3A SINE B2 -18 180 1 4 944 316 323 39 127 chr17 47169403 47169503 -48103148 - RSINE1 SINE B4 -84 81 1 4 944 664 306 11 26 chr17 47169834 47170025 -48102626 - B3A SINE B2 -6 192 5 4 944 710 199 13 60 chr17 47170192 47170238 -48102413 - B1_Mur3 SINE Alu -6 143 106 4 944 1335 73 67 0 chr17 47170238 47170416 -48102235 - B2_Mm2 SINE B2 -5 190 1 4 944 710 199 13 60 chr17 47170416 47170519 -48102132 - B1_Mur3 SINE Alu -44 105 1 4 944 731 228 146 0 chr17 47170686 47170857 -48101794 + B3 SINE B2 1 196 -20 4 944 856 184 0 20 chr17 47170896 47171046 -48101605 + B1_Mus1 SINE Alu 1 147 -1 4 944 323 288 67 12 chr17 47171193 47171358 -48101293 - HAL1 LINE L1 -979 1528 1355 4 944 347 100 0 0 chr17 47171423 47171473 -48101178 - HAL1-3A_ME LINE L1 -833 2025 1976 4 944 525 230 10 0 chr17 47171473 47171872 -48100779 + (TG)n Simple_repeat Simple_repeat 1 403 0 4 944 547 293 182 24 chr17 47171918 47172170 -48100481 - B4A SINE B4 0 292 1 4 944 374 251 73 204 chr17 47172203 47172232 -48100419 - RMER19B LTR ERVK 0 611 584 4 944 194 0 39 0 chr17 47172232 47172258 -48100393 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 944 1064 94 0 0 chr17 47172258 47172396 -48100255 - B1_Mus1 SINE Alu -10 138 1 4 944 2735 202 158 66 chr17 47172396 47173207 -48099444 - RMER19B LTR ERVK -18 884 1 4 944 243 0 0 0 chr17 47173232 47173259 -48099392 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 944 234 0 0 0 chr17 47173368 47173394 -48099257 + (TC)n Simple_repeat Simple_repeat 1 26 0 4 944 354 45 0 0 chr17 47173394 47173438 -48099213 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 944 284 308 6 76 chr17 47173560 47173718 -48098933 - YREP_Mm Unknown Unknown -1480 332 186 4 944 621 283 21 9 chr17 47173582 47173747 -48098904 + ID_B1 SINE B4 78 246 -46 4 944 242 237 0 13 chr17 47173756 47173833 -48098818 + G-rich Low_complexity Low_complexity 1 76 0 4 944 387 309 33 72 chr17 47174073 47174254 -48098397 - B4A SINE B4 -117 175 2 4 944 891 172 200 0 chr17 47174298 47174478 -48098173 - B3 SINE B2 0 216 1 4 944 3186 174 110 9 chr17 47174653 47175319 -48097332 + RMER19A LTR ERVK 1 733 -4 4 944 288 357 71 0 chr17 47175334 47175446 -48097205 + RSINE1 SINE B4 46 165 0 4 944 262 313 15 0 chr17 47175503 47175570 -48097081 + ID SINE ID 8 75 -149 4 944 299 203 17 0 chr17 47176662 47176721 -48095930 + MER53 DNA hAT 3 62 -131 4 944 607 216 152 0 chr17 47176744 47176869 -48095782 - B1_Mur2 SINE Alu 0 149 6 4 944 466 275 85 21 chr17 47176869 47176881 -48095770 - B4 SINE B4 -63 225 80 4 944 457 227 49 0 chr17 47176941 47177057 -48095594 + B1_Mur1 SINE Alu 7 138 -11 4 944 198 91 0 0 chr17 47177147 47177180 -48095471 + (T)n Simple_repeat Simple_repeat 1 33 0 4 944 1156 168 8 76 chr17 47177195 47177433 -48095218 + URR1A DNA MER1_type 5 226 0 4 944 255 334 0 15 chr17 47177517 47177611 -48095040 + MIRb SINE MIR 46 136 -140 4 944 726 218 64 78 chr17 47177625 47177844 -48094807 - B3 SINE B2 0 216 1 4 944 369 273 157 0 chr17 47177877 47177998 -48094653 + Tigger7 DNA MER2_type 2349 2488 -3 4 944 235 324 112 46 chr17 47178088 47178240 -48094411 + MLT2B2 LTR ERVL 357 518 -36 4 944 2530 188 73 73 chr17 47178389 47178571 -48094080 + RMER6A LTR ERVK 57 202 -554 4 944 537 16 0 0 chr17 47178571 47178633 -48094018 + (GA)n Simple_repeat Simple_repeat 1 62 0 4 944 2530 188 73 73 chr17 47178633 47179150 -48093501 + RMER6A LTR ERVK 203 756 0 4 944 243 0 0 0 chr17 47179388 47179415 -48093236 + (T)n Simple_repeat Simple_repeat 1 27 0 4 944 2455 170 156 70 chr17 47180181 47180963 -48091688 - RMER6C LTR ERVK -4 716 1 4 944 242 291 86 0 chr17 47181305 47181422 -48091229 - HAL1 LINE L1 -2132 375 249 4 944 464 0 18 0 chr17 47181448 47181504 -48091147 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 944 516 244 23 23 chr17 47181511 47181641 -48091010 - RSINE1 SINE B4 -32 133 4 4 944 357 84 355 19 chr17 47181994 47182101 -48090550 - B2_Mm2 SINE B2 -6 189 47 4 944 229 175 49 24 chr17 47182104 47182186 -48090465 + (CTCTG)n Simple_repeat Simple_repeat 3 86 0 4 944 908 77 0 0 chr17 47182191 47182308 -48090343 - B2_Mm1t SINE B2 -28 165 49 4 944 337 211 0 14 chr17 47182310 47182382 -48090269 - MTD LTR MaLR -291 128 58 4 944 919 151 14 7 chr17 47182451 47182598 -48090053 - B1_Mur2 SINE Alu -1 148 1 4 944 183 156 0 0 chr17 47182962 47182994 -48089657 + GA-rich Low_complexity Low_complexity 3 34 0 4 944 387 0 0 0 chr17 47183954 47183997 -48088654 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 4 944 609 169 19 145 chr17 47184011 47184170 -48088481 - B2_Mm2 SINE B2 -56 139 1 4 944 288 0 0 0 chr17 47184199 47184231 -48088420 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 944 342 297 113 80 chr17 47184464 47184702 -48087949 + B4A SINE B4 47 292 0 4 944 459 0 0 0 chr17 47184705 47184756 -48087895 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 944 502 187 179 7 chr17 47184854 47185005 -48087646 - URR1A DNA MER1_type -48 178 2 4 944 441 0 0 0 chr17 47185103 47185152 -48087499 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 14 1322 263 40 174 chr17 47185649 47186476 -48086175 + RMER1C Other Other 36 727 -615 4 945 1704 138 17 146 chr17 47186476 47186943 -48085708 - RMER17C LTR ERVK -3 407 1 5 945 1322 274 51 132 chr17 47186943 47187097 -48085554 + RMER1C Other Other 728 851 -491 4 945 307 374 21 14 chr17 47187144 47187285 -48085366 + MER5A1 DNA MER1_type 25 166 0 5 945 201 228 34 34 chr17 47187335 47187394 -48085257 + MER5B DNA MER1_type 51 109 -69 5 945 390 42 0 0 chr17 47187447 47187495 -48085156 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 945 204 40 0 0 chr17 47187551 47187576 -48085075 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 5 945 224 30 30 0 chr17 47187576 47187609 -48085042 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 5 945 254 189 33 70 chr17 47187612 47187711 -48084940 - B1_Mm SINE Alu 0 149 62 5 945 960 173 70 60 chr17 47187711 47187926 -48084725 - Lx9 LINE L1 -439 7205 6989 5 945 668 294 58 14 chr17 47187969 47188176 -48084475 + B3 SINE B2 1 216 0 5 945 429 292 0 8 chr17 47188300 47188431 -48084220 + B1F1 SINE Alu 1 130 -19 5 945 288 0 0 0 chr17 47188474 47188506 -48084145 + (CAAAA)n Simple_repeat Simple_repeat 1 32 0 5 945 728 206 2 10 chr17 47188788 47188939 -48083712 + B1_Mus2 SINE Alu 3 147 -3 5 945 485 58 14 0 chr17 47188947 47189016 -48083635 + (GGA)n Simple_repeat Simple_repeat 3 72 0 5 945 442 205 172 41 chr17 47189074 47189196 -48083455 + ID_B1 SINE B4 86 223 -1 5 945 360 0 0 0 chr17 47189197 47189237 -48083414 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 945 1141 33 13 0 chr17 47189797 47189947 -48082704 + (TCTA)n Simple_repeat Simple_repeat 4 155 0 5 945 738 177 46 0 chr17 47189947 47190077 -48082574 - B1_Mur2 SINE Alu -13 136 1 5 945 918 196 0 69 chr17 47190126 47190329 -48082322 + B3A SINE B2 7 195 -3 5 945 1434 255 19 48 chr17 47190473 47190844 -48081807 - MTE2a LTR MaLR 0 379 20 5 945 479 268 49 0 chr17 47190924 47191047 -48081604 + ID_B1 SINE B4 86 214 -10 5 945 426 146 0 0 chr17 47191047 47191129 -48081522 + (CTAA)n Simple_repeat Simple_repeat 1 82 0 5 945 360 261 146 0 chr17 47191151 47191281 -48081370 + B1F SINE Alu 1 149 0 5 945 366 74 0 0 chr17 47191283 47191337 -48081314 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 5 945 295 303 39 39 chr17 47191378 47191481 -48081170 + PB1D10 SINE Alu 1 103 -17 5 945 253 299 119 19 chr17 47191873 47191905 -48080746 - B2_Mm2 SINE B2 -18 177 2 5 945 752 189 0 8 chr17 47191905 47192033 -48080618 - RSINE1 SINE B4 -36 129 3 5 945 281 208 0 19 chr17 47192392 47192446 -48080205 - B4A SINE B4 -18 274 222 5 945 1511 50 11 0 chr17 47192453 47192635 -48080016 - B2_Mm1t SINE B2 -8 185 2 5 945 189 0 0 0 chr17 47192674 47192695 -48079956 + (TG)n Simple_repeat Simple_repeat 1 21 0 5 945 252 59 0 0 chr17 47192695 47192729 -48079922 + (GA)n Simple_repeat Simple_repeat 2 35 0 5 945 432 0 0 0 chr17 47192740 47192788 -48079863 + (CATA)n Simple_repeat Simple_repeat 4 51 0 5 945 863 207 75 28 chr17 47192928 47193142 -48079509 - B4A SINE B4 -68 224 1 5 945 273 284 37 12 chr17 47193307 47193389 -48079262 + MER81 DNA AcHobo 5 88 -26 5 945 1063 232 118 32 chr17 47193514 47193852 -48078799 + ORR1D2 LTR MaLR 3 369 -1 5 945 234 266 50 12 chr17 47193912 47193992 -48078659 + PB1D10 SINE Alu 35 117 0 5 945 189 0 0 0 chr17 47193994 47194015 -48078636 + (TG)n Simple_repeat Simple_repeat 1 21 0 5 945 180 0 0 0 chr17 47194089 47194109 -48078542 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 945 1114 132 63 0 chr17 47194475 47194649 -48078002 + B2_Mm2 SINE B2 1 185 -10 5 945 1209 62 0 0 chr17 47194660 47194806 -48077845 + B1_Mm SINE Alu 1 146 -1 5 945 936 221 31 5 chr17 47195048 47195244 -48077407 - B3 SINE B2 -11 205 5 5 945 392 358 56 77 chr17 47195305 47195683 -48076968 + L1ME4a LINE L1 5561 5930 -194 5 945 630 291 25 0 chr17 47195832 47195990 -48076661 - B3A SINE B2 -36 162 1 5 945 795 264 50 47 chr17 47196139 47196397 -48076254 + B4A SINE B4 5 263 -29 5 945 587 224 0 0 chr17 47196449 47196565 -48076086 + ID_B1 SINE B4 102 217 -7 5 945 422 181 48 0 chr17 47196574 47196657 -48075994 + B3A SINE B2 1 87 -111 5 945 386 219 0 17 chr17 47196674 47196790 -48075861 + G-rich Low_complexity Low_complexity 3 116 0 5 945 211 189 0 0 chr17 47197182 47197219 -48075432 + GA-rich Low_complexity Low_complexity 1 37 0 5 945 231 243 74 83 chr17 47197409 47197441 -48075210 - RLTR25B LTR ERVK -458 570 451 5 945 499 125 45 11 chr17 47197441 47197530 -48075121 - B1_Mur1 SINE Alu -9 140 49 5 945 577 129 0 0 chr17 47197529 47197614 -48075037 + 4.5SRNA scRNA scRNA 9 93 -1 5 945 1242 35 0 14 chr17 47197616 47197763 -48074888 + B1_Mus2 SINE Alu 2 146 -1 5 945 340 228 93 65 chr17 47197763 47197780 -48074871 + PB1D10 SINE Alu 92 117 0 5 945 258 329 9 39 chr17 47197811 47197827 -48074824 + PB1D7 SINE Alu 5 65 -85 5 945 457 237 76 34 chr17 47197827 47197945 -48074706 + ID_B1 SINE B4 100 222 -2 5 945 258 329 9 39 chr17 47197945 47197964 -48074687 + PB1D7 SINE Alu 66 150 0 5 945 585 157 49 0 chr17 47198156 47198258 -48074393 + B1_Mur3 SINE Alu 42 148 -1 5 945 279 0 0 0 chr17 47198288 47198319 -48074332 + (T)n Simple_repeat Simple_repeat 1 31 0 5 945 182 62 31 0 chr17 47198534 47198566 -48074085 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 5 945 1218 61 0 7 chr17 47198590 47198738 -48073913 - B1_Mus2 SINE Alu 0 147 1 5 945 867 208 79 33 chr17 47199066 47199280 -48073371 + B4 SINE B4 9 232 -60 5 945 201 129 0 0 chr17 47199395 47199426 -48073225 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 945 2138 82 0 0 chr17 47199711 47200004 -48072647 - RLTR8 LTR ERVK 0 365 73 5 945 626 177 47 0 chr17 47200239 47200367 -48072284 - B1_Mur4 SINE Alu 0 150 16 5 945 225 294 144 19 chr17 47200467 47200485 -48072166 - B1F SINE Alu -2 147 31 5 945 380 244 93 0 chr17 47200485 47200571 -48072080 - ID_B1 SINE B4 -19 205 112 5 945 513 0 0 0 chr17 47200624 47200681 -48071970 + (TTTA)n Simple_repeat Simple_repeat 2 58 0 5 945 261 119 0 0 chr17 47200681 47200723 -48071928 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 945 566 244 200 0 chr17 47200735 47200870 -48071781 - B3A SINE B2 -36 162 1 5 945 180 0 0 0 chr17 47200918 47200938 -48071713 + (TC)n Simple_repeat Simple_repeat 1 20 0 5 945 639 130 0 0 chr17 47202806 47202929 -48069722 + (TG)n Simple_repeat Simple_repeat 1 123 0 5 945 207 200 0 0 chr17 47202929 47202964 -48069687 + polypurine Low_complexity Low_complexity 2 36 0 5 945 399 118 0 0 chr17 47202991 47203067 -48069584 + (TG)n Simple_repeat Simple_repeat 1 76 0 5 945 207 162 0 0 chr17 47203067 47203104 -48069547 + GA-rich Low_complexity Low_complexity 2 38 0 5 945 800 240 38 128 chr17 47203171 47203491 -48069160 - B4A SINE B4 0 292 2 5 945 474 250 40 54 chr17 47203497 47203645 -48069006 - B1F SINE Alu -1 148 3 5 945 775 280 19 61 chr17 47203645 47203675 -48068976 - ID SINE ID -139 85 62 5 945 998 161 171 5 chr17 47203675 47203868 -48068783 - URR1A DNA MER1_type 0 226 2 5 945 775 280 19 61 chr17 47203868 47203930 -48068721 - ID SINE ID -163 61 2 5 945 799 255 18 76 chr17 47204018 47204243 -48068408 - B3 SINE B2 -1 215 4 5 945 905 194 39 11 chr17 47204256 47204438 -48068213 + B3 SINE B2 30 216 0 5 945 594 0 0 0 chr17 47204553 47204619 -48068032 + (TTTC)n Simple_repeat Simple_repeat 1 66 0 5 945 761 184 0 29 chr17 47204619 47204759 -48067892 - B1_Mur2 SINE Alu -12 137 2 5 945 269 151 0 22 chr17 47204856 47204907 -48067744 + B1F SINE Alu 21 70 -47 5 945 369 145 0 0 chr17 47204930 47204992 -48067659 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 945 486 191 42 14 chr17 47205233 47205356 -48067295 - RMER6C LTR ERVK -105 615 484 5 945 1274 34 0 0 chr17 47205933 47206080 -48066571 - B1_Mus2 SINE Alu 0 147 1 5 945 7697 151 22 12 chr17 47206117 47207759 -48064892 - Lx3C LINE L1 -11 6965 5305 5 945 1100 73 0 0 chr17 47207759 47207895 -48064756 - B1_Mus1 SINE Alu -12 136 1 5 945 6644 134 17 28 chr17 47207895 47208395 -48064256 - Lx3C LINE L1 -582 5304 4808 5 945 832 104 0 0 chr17 47208396 47208511 -48064140 + RLTR20C LTR ERVK 1 115 -419 5 945 1830 249 36 11 chr17 47208642 47209112 -48063539 - RLTR16 LTR ERVK -23 482 1 5 945 2152 150 111 8 chr17 47209112 47209415 -48063236 + RLTR20A1 LTR ERVK 114 457 -94 5 945 342 0 0 0 chr17 47209415 47209453 -48063198 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 945 2152 150 111 8 chr17 47209453 47209546 -48063105 + RLTR20A1 LTR ERVK 458 550 -1 5 945 19078 143 17 6 chr17 47209550 47212820 -48059831 - Lx3C LINE L1 -1077 4809 1505 5 945 1762 122 49 109 chr17 47213351 47213701 -48058950 + ORR1A4 LTR MaLR 1 329 0 5 945 599 276 62 16 chr17 47213710 47213968 -48058683 + L1M4 LINE L1 5429 5698 -476 5 945 691 233 94 6 chr17 47213977 47214158 -48058493 + B3A SINE B2 2 198 0 5 945 599 103 64 18 chr17 47214299 47214408 -48058243 + B1_Mus1 SINE Alu 34 147 -1 5 945 285 43 13 91 chr17 47214413 47214490 -48058161 + (CAAAAA)n Simple_repeat Simple_repeat 2 72 0 5 945 771 203 0 0 chr17 47214553 47214686 -48057965 - B1_Mur4 SINE Alu -8 142 10 5 945 2291 121 12 0 chr17 47214703 47215026 -48057625 - ORR1A2 LTR MaLR 0 327 1 5 945 3009 27 0 0 chr17 47215029 47215366 -48057285 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 945 56258 22 20 7 chr17 47215366 47221759 -48050892 - IAPEz-int LTR ERVK 0 6481 8 5 945 3062 15 0 0 chr17 47221759 47222096 -48050555 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 945 300 200 0 0 chr17 47222102 47222172 -48050479 + CT-rich Low_complexity Low_complexity 1 70 0 5 945 644 140 0 10 chr17 47222172 47222273 -48050378 - B1_Mur3 SINE Alu -9 140 41 5 945 896 282 15 0 chr17 47222811 47223017 -48049634 + B3 SINE B2 1 209 -7 5 945 365 86 17 0 chr17 47223131 47223189 -48049462 + (ATTG)n Simple_repeat Simple_repeat 4 62 0 6 945 666 248 0 0 chr17 47223190 47223323 -48049328 - B1F2 SINE Alu -15 134 2 6 945 420 293 110 8 chr17 47223323 47223507 -48049144 - B4 SINE B4 -64 228 3 6 945 971 229 35 10 chr17 47223556 47223759 -48048892 - B3 SINE B2 -8 208 1 6 945 441 0 0 0 chr17 47223966 47224015 -48048636 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 945 506 305 0 0 chr17 47224028 47224146 -48048505 - RSINE1 SINE B4 -44 121 4 6 945 742 142 0 0 chr17 47224181 47224287 -48048364 + B1_Mus1 SINE Alu 2 107 -41 6 945 430 279 0 97 chr17 47224287 47224332 -48048319 + ID_B1 SINE B4 83 218 -6 6 945 577 254 21 14 chr17 47224410 47224550 -48048101 - ID_B1 SINE B4 -2 222 82 6 945 238 297 50 86 chr17 47224434 47224574 -48048077 - MT2B LTR ERVL -325 276 142 6 945 1094 172 70 0 chr17 47224630 47224816 -48047835 - B3 SINE B2 -14 202 4 6 945 291 219 0 45 chr17 47225678 47225745 -48046906 + B3 SINE B2 9 72 -144 6 945 634 146 82 0 chr17 47225745 47225855 -48046796 + RLTR12B LTR ERVK 1 119 -409 6 945 369 0 0 0 chr17 47225859 47225900 -48046751 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 945 1245 186 28 59 chr17 47225900 47226178 -48046473 + RLTR12B LTR ERVK 259 528 0 6 945 419 229 62 41 chr17 47226179 47226325 -48046326 + B3 SINE B2 68 216 0 6 945 773 148 89 13 chr17 47226886 47227043 -48045608 - Lx4A LINE L1 -3 7055 6887 6 945 1389 193 136 6 chr17 47227117 47227266 -48045385 + ORR1C2 LTR MaLR 1 175 -209 6 945 189 74 0 0 chr17 47227266 47227293 -48045358 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 6 945 1389 193 136 6 chr17 47227293 47227481 -48045170 + ORR1C2 LTR MaLR 176 381 -3 6 945 242 125 0 20 chr17 47227496 47227545 -48045106 + (TAA)n Simple_repeat Simple_repeat 1 48 0 6 945 914 215 52 24 chr17 47227652 47227862 -48044789 + B3 SINE B2 1 216 0 6 945 786 170 36 29 chr17 47227888 47228027 -48044624 + B1_Mur3 SINE Alu 1 140 -9 6 945 1497 169 16 151 chr17 47228027 47228266 -48044385 + RLTR31A_Mm LTR ERVK 108 323 -261 6 945 1253 78 71 11 chr17 47228266 47228448 -48044203 + B2_Mm2 SINE B2 1 193 -2 6 945 1497 169 16 151 chr17 47228448 47228532 -48044119 + RLTR31A_Mm LTR ERVK 324 393 -191 6 945 447 19 0 0 chr17 47228532 47228584 -48044067 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 945 1497 190 47 125 chr17 47228584 47228691 -48043960 + RLTR31A_Mm LTR ERVK 394 560 -1 6 945 620 293 70 6 chr17 47228691 47228849 -48043802 - B3A SINE B2 -28 170 3 6 945 690 271 72 49 chr17 47228976 47229416 -48043235 - RLTR15 LTR ERVK -27 332 11 6 945 660 305 79 0 chr17 47229437 47229627 -48043024 + B4 SINE B4 84 288 -4 6 945 495 0 0 0 chr17 47229637 47229692 -48042959 + (CA)n Simple_repeat Simple_repeat 1 55 0 6 945 236 365 98 13 chr17 47229697 47229922 -48042729 + L2 LINE L2 2470 2713 -706 6 945 29 0 0 0 chr17 47230072 47230101 -48042550 + AT_rich Low_complexity Low_complexity 1 29 0 6 945 613 154 0 0 chr17 47230101 47230192 -48042459 + B1_Mus2 SINE Alu 2 92 -55 6 945 370 262 134 8 chr17 47230195 47230322 -48042329 + B3 SINE B2 74 216 0 6 945 450 181 0 0 chr17 47230328 47230433 -48042218 + GA-rich Low_complexity Low_complexity 2 106 0 6 945 207 145 0 75 chr17 47230639 47230706 -48041945 + CT-rich Low_complexity Low_complexity 6 67 0 6 945 445 262 9 0 chr17 47230735 47230842 -48041809 - B1_Mur3 SINE Alu 0 149 42 6 945 274 0 0 159 chr17 47230845 47230983 -48041668 + (CTCTG)n Simple_repeat Simple_repeat 5 120 0 6 945 271 211 0 37 chr17 47230984 47231038 -48041613 - PB1D9 SINE Alu -61 59 8 6 945 251 302 0 77 chr17 47231038 47231088 -48041563 - B4 SINE B4 -148 144 49 6 945 505 302 70 37 chr17 47231364 47231608 -48041043 + RMER15 LTR ERVL 324 575 0 6 945 566 179 0 7 chr17 47231652 47231787 -48040864 + (CA)n Simple_repeat Simple_repeat 1 134 0 6 945 1664 230 60 10 chr17 47232054 47232454 -48040197 - BGLII_B LTR ERVK -17 424 5 6 945 321 194 0 16 chr17 47232680 47232743 -48039908 + 4.5SRNA scRNA scRNA 25 86 -8 6 945 805 78 0 0 chr17 47232690 47232792 -48039859 + B1_Mus2 SINE Alu 37 138 -9 6 945 1224 48 0 20 chr17 47233057 47233206 -48039445 - B1_Mus1 SINE Alu -1 147 2 6 945 845 45 0 9 chr17 47233206 47233317 -48039334 + (TCC)n Simple_repeat Simple_repeat 1 110 0 6 945 372 172 16 0 chr17 47233344 47233408 -48039243 - ID4 SINE ID -18 65 1 6 945 1340 254 62 28 chr17 47233447 47233514 -48039137 + ORR1D2 LTR MaLR 3 70 -300 6 945 2250 88 22 9 chr17 47233514 47233837 -48038814 + ORR1A2 LTR MaLR 1 327 0 6 945 1340 254 62 28 chr17 47233837 47234125 -48038526 + ORR1D2 LTR MaLR 71 370 0 6 945 846 229 28 15 chr17 47234147 47234411 -48038240 - MTEa LTR MaLR 0 379 84 6 945 825 268 37 29 chr17 47234408 47234650 -48038001 - MTD LTR MaLR -175 244 1 6 945 715 193 89 0 chr17 47235404 47235539 -48037112 - B1_Mur1 SINE Alu -1 148 2 6 945 312 91 0 0 chr17 47235582 47235626 -48037025 + (T)n Simple_repeat Simple_repeat 1 44 0 6 945 410 279 59 29 chr17 47235761 47235931 -48036720 + L1MB5 LINE L1 5837 6011 -163 6 945 423 282 81 118 chr17 47235945 47236291 -48036360 - ORR1E LTR MaLR 0 359 27 6 945 415 327 0 43 chr17 47236420 47236530 -48036121 - B3A SINE B2 0 198 94 6 945 3116 129 168 59 chr17 47236530 47237191 -48035460 - RMER6A LTR ERVK 0 756 24 6 945 231 36 0 0 chr17 47237192 47237220 -48035431 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 945 384 40 0 0 chr17 47237220 47237269 -48035382 + (GA)n Simple_repeat Simple_repeat 1 50 0 6 945 432 259 116 0 chr17 47237274 47237386 -48035265 - B3A SINE B2 -46 152 28 6 945 496 299 33 20 chr17 47237398 47237548 -48035103 - ID_B1 SINE B4 -70 154 3 6 945 277 342 81 0 chr17 47237865 47237976 -48034675 - PB1 SINE Alu -2 125 6 6 945 222 227 176 29 chr17 47237993 47238061 -48034590 + RSINE1 SINE B4 43 120 -45 6 945 441 0 0 0 chr17 47238069 47238118 -48034533 + (TC)n Simple_repeat Simple_repeat 1 49 0 6 945 279 0 0 0 chr17 47238118 47238148 -48034503 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 945 1273 172 10 15 chr17 47238477 47238683 -48033968 + B3 SINE B2 9 213 -3 6 945 476 222 60 35 chr17 47238772 47238915 -48033736 - B3 SINE B2 -3 213 1 6 945 493 141 0 13 chr17 47239076 47239155 -48033496 - B1_Mus2 SINE Alu -2 145 68 6 945 950 237 211 24 chr17 47239317 47239654 -48032997 - MTD LTR MaLR 0 419 20 6 945 438 20 0 0 chr17 47239654 47239705 -48032946 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 945 327 49 0 0 chr17 47239705 47239745 -48032906 + (GA)n Simple_repeat Simple_repeat 1 41 0 6 945 726 311 16 5 chr17 47239784 47239975 -48032676 - ID_B1 SINE B4 -31 193 1 6 945 821 128 209 55 chr17 47240090 47240272 -48032379 - B3 SINE B2 -6 210 1 6 945 364 200 0 48 chr17 47240298 47240382 -48032269 - ID4 SINE ID -2 81 2 6 945 1361 156 19 0 chr17 47240555 47240767 -48031884 + B3 SINE B2 1 216 0 6 945 468 270 9 9 chr17 47240961 47241073 -48031578 - PB1D7 SINE Alu -1 119 8 6 945 249 310 17 8 chr17 47241151 47241268 -48031383 - L1_Mur2 LINE L1 -2139 3738 3621 6 945 222 242 48 0 chr17 47241476 47241538 -48031113 - ID4 SINE ID -16 67 3 6 945 227 245 0 0 chr17 47241653 47241702 -48030949 + Charlie24 DNA MER1_type 438 486 -1964 6 945 836 274 75 0 chr17 47242036 47242237 -48030414 + B3 SINE B2 1 216 0 6 945 560 138 9 44 chr17 47242665 47242779 -48029872 - B2_Mm1t SINE B2 -1 192 83 6 945 226 94 0 0 chr17 47242767 47242799 -48029852 - B3A SINE B2 -166 32 1 6 945 402 267 39 19 chr17 47242838 47242941 -48029710 + PB1D10 SINE Alu 1 105 -12 6 945 276 30 0 0 chr17 47242948 47242981 -48029670 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 6 945 382 326 104 0 chr17 47243238 47243373 -48029278 + RSINE1 SINE B4 9 157 -8 6 945 360 191 0 0 chr17 47243439 47243528 -48029123 + (CA)n Simple_repeat Simple_repeat 1 89 0 6 945 230 160 20 0 chr17 47243682 47243732 -48028919 + T-rich Low_complexity Low_complexity 5 55 0 6 945 435 83 0 0 chr17 47243725 47243785 -48028866 + (TCCC)n Simple_repeat Simple_repeat 3 62 0 6 945 294 95 0 0 chr17 47243785 47243827 -48028824 + (T)n Simple_repeat Simple_repeat 1 42 0 6 945 1165 81 0 0 chr17 47243827 47243975 -48028676 - B1_Mus1 SINE Alu 0 148 1 6 945 360 250 230 16 chr17 47244450 47244576 -48028075 - RSINE1 SINE B4 -2 163 11 6 945 322 65 63 25 chr17 47244591 47244670 -48027981 + T-rich Low_complexity Low_complexity 4 85 0 6 945 708 12 0 0 chr17 47244774 47244855 -48027796 + (TC)n Simple_repeat Simple_repeat 1 81 0 6 945 291 28 0 0 chr17 47244855 47244890 -48027761 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 945 511 264 152 7 chr17 47245033 47245178 -48027473 - B4 SINE B4 -42 250 85 6 945 992 170 11 32 chr17 47245174 47245362 -48027289 - B3 SINE B2 -31 185 2 6 945 492 189 33 0 chr17 47245363 47245453 -48027198 - B4 SINE B4 -197 95 3 6 945 477 122 0 0 chr17 47245559 47245633 -48027018 + (TA)n Simple_repeat Simple_repeat 1 74 0 6 945 213 278 0 18 chr17 47245648 47245703 -48026948 + (CA)n Simple_repeat Simple_repeat 1 54 0 6 945 2548 154 59 35 chr17 47245879 47246458 -48026193 - RLTR31_Mm LTR ERVK 0 590 1 6 945 258 308 37 37 chr17 47246466 47246574 -48026077 - MER46C DNA MER2_type -135 203 96 6 945 895 52 0 0 chr17 47246621 47246737 -48025914 + B1_Mus2 SINE Alu 32 147 0 6 945 325 159 14 0 chr17 47246761 47246830 -48025821 + Lx9 LINE L1 7574 7643 -1 6 945 777 230 58 0 chr17 47246919 47247093 -48025558 - MTE2b LTR MaLR 0 379 196 6 945 533 252 34 0 chr17 47247127 47247246 -48025405 - ID_B1 SINE B4 -14 210 88 7 945 675 298 0 0 chr17 47247248 47247399 -48025252 - MTE2b LTR MaLR -190 189 39 6 945 396 0 0 0 chr17 47247445 47247489 -48025162 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 945 417 258 93 0 chr17 47247944 47248041 -48024610 + RSINE1 SINE B4 3 108 -57 7 945 474 299 77 24 chr17 47248229 47248397 -48024254 + B3A SINE B2 1 177 -21 7 945 441 54 0 0 chr17 47248399 47248455 -48024196 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 945 1530 279 191 14 chr17 47248481 47249229 -48023422 + RMER1B Other Other 41 891 -175 7 945 270 279 104 31 chr17 47249198 47249294 -48023357 + RMER1B Other Other 38 140 -926 7 945 31 0 0 0 chr17 47249369 47249400 -48023251 + AT_rich Low_complexity Low_complexity 1 31 0 7 945 468 231 16 0 chr17 47249400 47249521 -48023130 + RMER1C Other Other 1218 1340 -2 7 945 858 222 16 21 chr17 47249565 47249758 -48022893 + B3 SINE B2 16 207 -9 7 945 266 77 58 0 chr17 47249769 47249821 -48022830 + (GAAAA)n Simple_repeat Simple_repeat 5 59 0 7 945 221 139 23 0 chr17 47250131 47250174 -48022477 + CT-rich Low_complexity Low_complexity 2 45 0 7 945 862 156 204 11 chr17 47250199 47250380 -48022271 + B3 SINE B2 1 216 0 7 945 28 0 0 0 chr17 47250386 47250414 -48022237 + AT_rich Low_complexity Low_complexity 1 28 0 7 945 764 209 73 48 chr17 47250453 47250659 -48021992 + B3 SINE B2 2 212 -4 7 945 488 189 7 0 chr17 47251098 47251251 -48021400 + (CA)n Simple_repeat Simple_repeat 1 154 0 7 945 504 291 125 88 chr17 47252018 47252361 -48020290 - MT2A LTR ERVL -3 530 157 7 945 414 0 0 0 chr17 47252664 47252710 -48019941 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 945 277 335 98 46 chr17 47252743 47253028 -48019623 - LTR16E1 LTR ERVL 0 538 239 7 945 364 233 11 53 chr17 47253078 47253173 -48019478 - ID_B1 SINE B4 -133 91 1 7 945 351 275 134 27 chr17 47253224 47253336 -48019315 + PB1 SINE Alu 2 125 -2 7 945 480 172 0 0 chr17 47253404 47253515 -48019136 + T-rich Low_complexity Low_complexity 18 128 0 7 945 1213 54 0 0 chr17 47253515 47253662 -48018989 - B1_Mm SINE Alu 0 147 1 7 945 480 172 0 0 chr17 47253662 47253678 -48018973 + T-rich Low_complexity Low_complexity 2 17 0 7 945 219 250 0 0 chr17 47253678 47253734 -48018917 - PB1D9 SINE Alu 0 120 65 7 945 281 250 21 64 chr17 47253718 47253812 -48018839 - RLTR25A LTR ERVK -493 610 521 7 945 720 158 9 0 chr17 47253729 47253843 -48018808 - B1_Mur1 SINE Alu -22 127 13 7 945 612 333 74 94 chr17 47253843 47254107 -48018544 + MER44D DNA MER2_type 4 315 -390 7 945 853 75 3 2 chr17 47254107 47254232 -48018419 - B1_Mus1 SINE Alu -23 126 1 7 945 612 333 74 94 chr17 47254232 47254558 -48018093 + MER44D DNA MER2_type 316 704 -1 7 945 731 294 19 23 chr17 47254888 47254948 -48017703 - B4A SINE B4 -2 290 231 7 945 321 216 141 47 chr17 47254948 47254976 -48017675 - B2_Mm2 SINE B2 -9 186 159 7 945 273 57 0 0 chr17 47254976 47255011 -48017640 + (TG)n Simple_repeat Simple_repeat 1 35 0 7 945 321 216 141 47 chr17 47255011 47255152 -48017499 - B2_Mm2 SINE B2 -37 158 1 7 945 731 294 19 23 chr17 47255152 47255307 -48017344 - B4A SINE B4 -62 230 76 7 945 239 273 30 0 chr17 47255369 47255435 -48017216 - ORR1E LTR MaLR 0 379 312 7 945 818 194 196 22 chr17 47255438 47255622 -48017029 + B3 SINE B2 1 216 0 7 945 837 149 62 28 chr17 47255631 47255776 -48016875 + B1_Mur4 SINE Alu 1 150 0 7 945 699 103 0 0 chr17 47255787 47255796 -48016855 + (GA)n Simple_repeat Simple_repeat 1 9 0 7 945 938 88 70 42 chr17 47255796 47255939 -48016712 + B1_Mus2 SINE Alu 1 147 0 7 945 699 103 0 0 chr17 47255939 47256055 -48016596 + (GA)n Simple_repeat Simple_repeat 2 117 0 7 945 399 254 213 16 chr17 47256093 47256281 -48016370 - ORR1E LTR MaLR -134 225 1 7 945 1213 102 33 17 chr17 47256310 47256490 -48016161 + B2_Mm2 SINE B2 4 186 -9 7 945 244 286 52 67 chr17 47256505 47256640 -48016011 - MER20B DNA MER1_type -392 391 259 7 945 1158 113 0 0 chr17 47256649 47256936 -48015715 + (TG)n Simple_repeat Simple_repeat 1 287 0 7 945 578 298 36 36 chr17 47257003 47257198 -48015453 - B3A SINE B2 -1 197 3 7 945 623 187 9 9 chr17 47257287 47257400 -48015251 - B4A SINE B4 -65 227 115 7 945 854 250 59 34 chr17 47257400 47257679 -48014972 - ORR1D2 LTR MaLR -86 288 1 7 945 432 221 140 112 chr17 47257860 47258038 -48014613 + B3A SINE B2 1 183 -15 7 945 291 54 0 0 chr17 47258048 47258085 -48014566 + (TAA)n Simple_repeat Simple_repeat 1 37 0 7 945 910 166 0 0 chr17 47258147 47258286 -48014365 - B1_Mur4 SINE Alu 0 150 12 7 945 631 260 6 38 chr17 47258286 47258307 -48014344 - ID_B1 SINE B4 0 224 70 7 945 762 223 107 15 chr17 47258648 47258853 -48013798 + ID_B1 SINE B4 1 224 0 7 945 443 238 77 3 chr17 47258983 47259104 -48013547 - MER5A DNA MER1_type -62 127 9 7 945 282 215 107 18 chr17 47259148 47259281 -48013370 - B3A SINE B2 0 198 26 7 945 437 259 134 22 chr17 47259363 47259497 -48013154 - RSINE1 SINE B4 -13 152 4 7 945 972 48 0 8 chr17 47259532 47259657 -48012994 + B1_Mus2 SINE Alu 24 147 0 7 945 230 53 79 0 chr17 47259657 47259695 -48012956 + (CAAAA)n Simple_repeat Simple_repeat 5 45 0 7 945 300 291 44 9 chr17 47259928 47260058 -48012593 - MTD LTR MaLR -13 406 282 7 945 764 232 77 0 chr17 47260089 47260283 -48012368 + ID_B1 SINE B4 4 212 -12 7 945 206 222 0 0 chr17 47260538 47260574 -48012077 + (CGTG)n Simple_repeat Simple_repeat 4 39 0 7 945 603 248 71 13 chr17 47261153 47261308 -48011343 + RSINE1 SINE B4 2 165 0 7 945 988 171 0 16 chr17 47261345 47261529 -48011122 + B2_Mm2 SINE B2 1 181 -14 7 945 21 0 0 0 chr17 47261544 47261565 -48011086 + AT_rich Low_complexity Low_complexity 1 21 0 7 945 534 265 38 0 chr17 47261814 47261946 -48010705 + ID_B1 SINE B4 87 223 -1 7 945 609 271 155 8 chr17 47261955 47262142 -48010509 + B3A SINE B2 1 203 -13 7 945 282 237 0 0 chr17 47262190 47262266 -48010385 + (CA)n Simple_repeat Simple_repeat 1 76 0 7 945 23 33 0 0 chr17 47262277 47262307 -48010344 + AT_rich Low_complexity Low_complexity 1 30 0 7 945 654 243 62 17 chr17 47262519 47262695 -48009956 + B3A SINE B2 1 184 -14 7 945 249 314 7 21 chr17 47262765 47262908 -48009743 + (CA)n Simple_repeat Simple_repeat 2 142 0 7 945 765 188 77 72 chr17 47263032 47263227 -48009424 - ID_B1 SINE B4 -28 196 1 7 945 479 261 43 0 chr17 47263320 47263435 -48009216 + B1F SINE Alu 10 129 -20 7 945 264 30 0 0 chr17 47263453 47263486 -48009165 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 945 792 240 166 89 chr17 47263542 47263880 -48008771 + ORR1D2 LTR MaLR 4 367 -3 7 945 559 148 0 11 chr17 47264171 47264260 -48008391 + MT2B LTR ERVL 1 88 -445 7 945 1423 129 29 16 chr17 47264313 47264557 -48008094 - Lx5 LINE L1 0 7050 6804 7 945 2156 148 67 14 chr17 47264557 47264928 -48007723 + Lx5 LINE L1 6420 6810 -240 7 945 1661 32 0 0 chr17 47264983 47265172 -48007479 + B2_Mm1a SINE B2 2 190 -3 7 945 7133 73 20 3 chr17 47265186 47266324 -48006327 - L1Md_F2 LINE L1 -14 6568 5403 7 945 1059 215 82 42 chr17 47266334 47266689 -48005962 + MT2B LTR ERVL 85 594 -7 7 945 25 0 0 0 chr17 47266978 47267003 -48005648 + AT_rich Low_complexity Low_complexity 1 25 0 7 945 2336 110 3 3 chr17 47267305 47267632 -48005019 - ORR1A4 LTR MaLR -2 327 1 7 945 3643 177 42 22 chr17 47267675 47268397 -48004254 - RMER19A LTR ERVK -1 736 1 7 945 21 57 0 0 chr17 47268577 47268612 -48004039 + AT_rich Low_complexity Low_complexity 1 35 0 7 945 1515 63 16 0 chr17 47268612 47268801 -48003850 - B2_Mm2 SINE B2 -3 192 1 7 945 896 250 37 33 chr17 47268801 47269016 -48003635 - B3 SINE B2 0 216 1 7 945 372 255 71 10 chr17 47269403 47269502 -48003149 + L1MEf LINE L1 803 907 -5293 7 945 325 286 0 0 chr17 47269606 47269676 -48002975 + PB1D10 SINE Alu 4 73 -44 7 945 486 0 0 0 chr17 47269676 47269730 -48002921 + (TC)n Simple_repeat Simple_repeat 1 54 0 7 945 279 0 0 0 chr17 47269730 47269760 -48002891 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 945 284 304 53 32 chr17 47269760 47269783 -48002868 + B1F2 SINE Alu 77 99 -50 7 945 180 0 0 0 chr17 47269844 47269864 -48002787 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 945 279 214 52 157 chr17 47269889 47270018 -48002633 - RSINE1 SINE B4 -2 290 73 7 945 207 0 0 0 chr17 47270018 47270041 -48002610 + (CTGTG)n Simple_repeat Simple_repeat 5 27 0 7 945 275 312 120 99 chr17 47270041 47270229 -48002422 - B4 SINE B4 -104 188 1 7 945 221 133 44 0 chr17 47270354 47270399 -48002252 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 7 945 766 117 0 43 chr17 47270724 47270911 -48001740 + C-rich Low_complexity Low_complexity 1 179 0 7 945 226 89 0 62 chr17 47270978 47271026 -48001625 + C-rich Low_complexity Low_complexity 2 46 0 7 945 533 213 164 0 chr17 47271221 47271343 -48001308 + B1_Mus1 SINE Alu 1 142 -6 7 945 863 229 49 5 chr17 47271365 47271549 -48001102 - B3A SINE B2 -1 197 6 7 945 490 275 167 56 chr17 47271644 47271860 -48000791 + B4 SINE B4 34 273 -19 7 945 201 238 0 0 chr17 47271882 47271924 -48000727 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 945 1197 41 14 0 chr17 47271959 47272104 -48000547 + B1_Mur4 SINE Alu 3 149 -1 7 945 788 189 60 124 chr17 47272113 47272330 -48000321 + B3 SINE B2 1 203 -13 7 945 28 29 0 0 chr17 47272330 47272365 -48000286 + AT_rich Low_complexity Low_complexity 1 35 0 7 945 1022 255 17 0 chr17 47272884 47273119 -47999532 + B4A SINE B4 1 239 -53 7 945 423 0 0 0 chr17 47273197 47273244 -47999407 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 945 486 0 0 0 chr17 47273244 47273297 -47999354 + (GA)n Simple_repeat Simple_repeat 2 55 0 7 945 981 65 30 6 chr17 47273430 47273599 -47999052 + (TG)n Simple_repeat Simple_repeat 2 174 0 8 945 342 152 0 0 chr17 47273825 47273884 -47998767 + GA-rich Low_complexity Low_complexity 3 61 0 8 945 1062 201 29 0 chr17 47274092 47274301 -47998350 - B3 SINE B2 0 216 2 8 945 725 208 8 0 chr17 47274331 47274461 -47998190 + B1_Mur1 SINE Alu 5 135 -14 8 945 324 0 0 0 chr17 47274461 47274497 -47998154 + (CCAA)n Simple_repeat Simple_repeat 3 38 0 8 945 579 254 8 16 chr17 47274629 47274757 -47997894 + RSINE1 SINE B4 1 127 -38 8 945 213 39 0 0 chr17 47274915 47274941 -47997710 + (TG)n Simple_repeat Simple_repeat 1 26 0 8 945 627 39 0 0 chr17 47274941 47275018 -47997633 + (GA)n Simple_repeat Simple_repeat 1 78 0 8 945 204 236 153 17 chr17 47275179 47275291 -47997360 + MIRm SINE MIR 35 165 -103 8 945 294 233 0 0 chr17 47276110 47276196 -47996455 + (CA)n Simple_repeat Simple_repeat 2 87 0 8 945 26 0 0 0 chr17 47276645 47276671 -47995980 + GC_rich Low_complexity Low_complexity 1 26 0 8 945 29 0 0 0 chr17 47276839 47276868 -47995783 + GC_rich Low_complexity Low_complexity 1 29 0 8 945 41 58 0 0 chr17 47277569 47277638 -47995013 + GC_rich Low_complexity Low_complexity 1 69 0 8 945 220 296 11 22 chr17 47277711 47277801 -47994850 + C-rich Low_complexity Low_complexity 5 93 0 8 945 23 0 0 0 chr17 47277859 47277882 -47994769 + AT_rich Low_complexity Low_complexity 1 23 0 8 945 555 107 0 0 chr17 47279775 47279859 -47992792 + (GAAA)n Simple_repeat Simple_repeat 2 85 0 8 945 198 0 0 0 chr17 47280271 47280293 -47992358 + (CCA)n Simple_repeat Simple_repeat 2 23 0 8 945 737 211 33 49 chr17 47281834 47282018 -47990633 - B3A SINE B2 -16 182 2 8 945 214 147 0 0 chr17 47282703 47282737 -47989914 + (CGTG)n Simple_repeat Simple_repeat 4 37 0 8 945 235 315 0 40 chr17 47282737 47282813 -47989838 - B4A SINE B4 -1 291 219 8 945 788 262 34 64 chr17 47283005 47283241 -47989410 - B4A SINE B4 -59 233 5 8 945 780 191 40 44 chr17 47283678 47283871 -47988780 - B3 SINE B2 0 216 16 8 945 248 328 14 0 chr17 47284218 47284297 -47988354 - ID4 SINE ID -1 82 1 8 945 366 32 0 75 chr17 47284297 47284364 -47988287 + (TCCCC)n Simple_repeat Simple_repeat 4 65 0 8 945 260 111 22 0 chr17 47284361 47284406 -47988245 + (TTTC)n Simple_repeat Simple_repeat 4 49 0 8 945 384 280 9 18 chr17 47284451 47284560 -47988091 - B1F1 SINE Alu -20 129 22 8 945 247 261 38 105 chr17 47284458 47284591 -47988060 - MT2B LTR ERVL -323 278 155 8 945 666 157 0 0 chr17 47284618 47284758 -47987893 + (TG)n Simple_repeat Simple_repeat 1 140 0 8 945 306 211 12 145 chr17 47284790 47284873 -47987778 + RSINE1 SINE B4 71 142 -23 8 945 180 111 0 0 chr17 47285439 47285466 -47987185 + (CGAA)n Simple_repeat Simple_repeat 3 29 0 8 945 483 301 143 12 chr17 47285485 47285653 -47986998 + ID_B1 SINE B4 19 208 -16 8 945 188 318 8 127 chr17 47285795 47285921 -47986730 + MIRc SINE MIR 123 233 -35 8 945 453 283 74 68 chr17 47286306 47286469 -47986182 - RSINE1 SINE B4 0 165 2 8 945 812 175 176 27 chr17 47287258 47287446 -47985205 - B3 SINE B2 0 216 1 8 945 1172 69 0 7 chr17 47287481 47287627 -47985024 - B1_Mus1 SINE Alu -2 146 2 8 945 244 321 80 29 chr17 47288252 47288390 -47984261 + L2b LINE L2 3204 3348 -27 8 945 24 0 0 0 chr17 47288428 47288452 -47984199 + AT_rich Low_complexity Low_complexity 1 24 0 8 945 209 352 119 14 chr17 47289592 47289811 -47982840 - MIR SINE MIR -2 260 19 8 945 744 342 36 50 chr17 47290281 47290638 -47982013 - MLT1A LTR MaLR -2 372 21 8 945 411 286 101 60 chr17 47290719 47290786 -47981865 - MER3 DNA MER1_type -18 191 133 8 945 1665 26 0 5 chr17 47290786 47290979 -47981672 + B2_Mm1a SINE B2 2 193 0 8 945 411 286 101 60 chr17 47290979 47291060 -47981591 - MER3 DNA MER1_type -77 132 37 8 945 245 401 74 5 chr17 47291182 47291385 -47981266 + L2b LINE L2 3136 3352 -23 8 945 740 302 0 31 chr17 47291397 47291592 -47981059 + B3A SINE B2 1 189 -9 8 945 254 320 53 0 chr17 47291860 47291935 -47980716 - ID4_ SINE ID -2 81 3 8 945 4314 132 32 35 chr17 47292051 47292469 -47980182 - RMER6A LTR ERVK -10 746 326 8 945 1338 55 71 6 chr17 47292469 47292651 -47980000 - B2_Mm2 SINE B2 0 195 2 8 945 4314 132 32 35 chr17 47292651 47292980 -47979671 - RMER6A LTR ERVK -431 325 1 8 945 430 362 0 30 chr17 47293793 47293958 -47978693 - MIRb SINE MIR -105 163 4 8 945 951 192 44 57 chr17 47294125 47294352 -47978299 - ID_B1 SINE B4 0 224 1 8 945 703 234 95 40 chr17 47294923 47295123 -47977528 - B3 SINE B2 0 216 6 8 945 222 310 11 54 chr17 47295132 47295224 -47977427 - PB1D7 SINE Alu 0 120 33 8 945 26 0 0 0 chr17 47295265 47295291 -47977360 + AT_rich Low_complexity Low_complexity 1 26 0 8 945 192 77 0 0 chr17 47295291 47295317 -47977334 + (TG)n Simple_repeat Simple_repeat 1 26 0 8 945 353 320 70 23 chr17 47295320 47295448 -47977203 - RSINE1 SINE B4 -21 144 11 8 945 406 240 216 11 chr17 47295863 47296044 -47976607 + ID_B1 SINE B4 1 218 -6 8 945 497 228 18 6 chr17 47296059 47296227 -47976424 + (TA)n Simple_repeat Simple_repeat 1 170 0 8 945 270 229 0 32 chr17 47296248 47296311 -47976340 + (CATA)n Simple_repeat Simple_repeat 3 63 0 8 945 330 26 0 0 chr17 47296749 47296788 -47975863 + (TTA)n Simple_repeat Simple_repeat 2 40 0 8 945 882 208 68 40 chr17 47296920 47297134 -47975517 - B3 SINE B2 0 216 1 8 945 180 111 0 0 chr17 47297220 47297247 -47975404 + (TCG)n Simple_repeat Simple_repeat 2 28 0 8 945 492 128 0 0 chr17 47297250 47297328 -47975323 + (TTCC)n Simple_repeat Simple_repeat 2 79 0 8 945 1231 55 7 0 chr17 47297416 47297562 -47975089 + B1_Mus1 SINE Alu 2 148 0 8 945 340 272 15 88 chr17 47297787 47297924 -47974727 + RSINE1 SINE B4 11 137 -28 8 945 809 179 249 0 chr17 47298036 47298209 -47974442 + B3 SINE B2 1 216 0 8 945 702 221 89 12 chr17 47298314 47298483 -47974168 - B3A SINE B2 -16 182 1 8 945 608 180 8 5 chr17 47298549 47299180 -47973471 + (TG)n Simple_repeat Simple_repeat 1 633 0 8 945 284 297 141 46 chr17 47299184 47300013 -47972638 - L1MEg1 LINE L1 -5460 775 690 8 945 1375 89 0 15 chr17 47300153 47300348 -47972303 - B2_Mm2 SINE B2 -2 193 2 8 945 481 338 0 7 chr17 47300364 47300507 -47972144 - ID_B1 SINE B4 -2 222 81 8 945 1002 219 49 0 chr17 47300669 47300874 -47971777 - B3 SINE B2 0 216 2 8 945 255 31 0 0 chr17 47300960 47300992 -47971659 + (C)n Simple_repeat Simple_repeat 1 32 0 8 945 494 182 0 83 chr17 47301241 47301337 -47971314 + RSINE1 SINE B4 2 89 -76 8 945 890 265 29 39 chr17 47301447 47301726 -47970925 + B4A SINE B4 2 277 -15 8 945 333 0 0 0 chr17 47301972 47302009 -47970642 + (AGCTG)n Simple_repeat Simple_repeat 1 37 0 8 945 418 223 181 23 chr17 47302178 47302311 -47970340 - ID_B1 SINE B4 -63 161 8 8 945 266 283 74 79 chr17 47302860 47302938 -47969713 + YREP_Mm Unknown Unknown 120 294 -1518 8 945 522 217 157 0 chr17 47302938 47303053 -47969598 - ID_B1 SINE B4 -11 213 81 8 945 414 233 77 10 chr17 47303076 47303180 -47969471 + PB1D10 SINE Alu 6 116 -1 8 945 1219 49 0 0 chr17 47303195 47303339 -47969312 + B1_Mus2 SINE Alu 1 144 -3 8 945 207 0 0 0 chr17 47303339 47303362 -47969289 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 945 431 321 120 75 chr17 47304135 47304401 -47968250 - B4 SINE B4 -14 278 1 8 945 21 36 0 0 chr17 47304616 47304644 -47968007 + AT_rich Low_complexity Low_complexity 1 28 0 8 945 409 209 0 34 chr17 47305419 47305508 -47967143 - ID_B1 SINE B4 -3 221 136 8 945 696 265 6 0 chr17 47306756 47306922 -47965729 - B4 SINE B4 -121 171 5 8 945 201 39 0 0 chr17 47307682 47307708 -47964943 + (TTG)n Simple_repeat Simple_repeat 2 27 0 8 945 1172 58 0 0 chr17 47307708 47307845 -47964806 - B1_Mus2 SINE Alu -10 137 1 8 945 261 0 0 0 chr17 47308098 47308127 -47964524 + (TG)n Simple_repeat Simple_repeat 1 29 0 8 945 751 95 311 7 chr17 47308564 47308712 -47963939 - B2_Mm2 SINE B2 0 195 3 8 945 183 42 0 0 chr17 47308729 47308753 -47963898 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 8 945 406 327 74 88 chr17 47308969 47309254 -47963397 + B4 SINE B4 1 281 -11 8 945 423 0 0 0 chr17 47309318 47309365 -47963286 + (TG)n Simple_repeat Simple_repeat 1 47 0 8 945 628 266 0 48 chr17 47309450 47309616 -47963035 - RSINE1 SINE B4 0 165 8 8 945 280 300 64 0 chr17 47309698 47309808 -47962843 + Charlie9 DNA MER1_type 1 117 -2640 8 945 955 166 67 81 chr17 47309923 47310095 -47962556 - B3 SINE B2 -3 213 40 8 945 279 0 0 0 chr17 47310095 47310126 -47962525 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8 945 967 83 23 0 chr17 47310126 47310258 -47962393 - B1_Mus1 SINE Alu -10 138 4 8 945 955 166 67 81 chr17 47310258 47310294 -47962357 - B3 SINE B2 -177 39 8 8 945 194 329 12 35 chr17 47310352 47310437 -47962214 - MIRb SINE MIR -9 259 177 8 945 334 266 60 60 chr17 47310437 47310553 -47962098 + PB1D7 SINE Alu 1 116 -4 8 945 1430 72 0 6 chr17 47310707 47310888 -47961763 + B2_Mm2 SINE B2 2 181 -14 8 945 628 288 47 71 chr17 47310894 47311148 -47961503 + B4 SINE B4 27 274 -18 8 945 828 203 141 0 chr17 47312103 47312295 -47960356 - ID_B1 SINE B4 -1 223 5 8 945 648 273 17 0 chr17 47313039 47313211 -47959440 + B3A SINE B2 1 175 -23 8 945 353 150 248 49 chr17 47313977 47314138 -47958513 - B2_Mm2 SINE B2 -1 194 2 9 945 1085 92 55 12 chr17 47314170 47314335 -47958316 - B2_Mm1t SINE B2 -13 180 9 9 945 520 294 122 10 chr17 47314336 47314532 -47958119 - B4 SINE B4 -67 225 8 9 945 198 0 0 0 chr17 47314705 47314727 -47957924 + (TG)n Simple_repeat Simple_repeat 2 23 0 9 945 587 294 13 33 chr17 47315290 47315441 -47957210 + RSINE1 SINE B4 10 157 -8 9 945 195 42 0 0 chr17 47315463 47315487 -47957164 + (CA)n Simple_repeat Simple_repeat 1 24 0 9 945 1492 174 125 0 chr17 47315626 47315947 -47956704 - MTD LTR MaLR -58 361 1 9 945 301 323 152 48 chr17 47316458 47316728 -47955923 + L1M5 LINE L1 3695 3992 -2154 9 118 708 226 95 33 chr17 47316825 47317036 -47955615 + ID_B1 SINE B4 1 224 0 9 946 601 156 24 201 chr17 47317089 47317258 -47955393 + B1_Mus1 SINE Alu 5 143 -5 9 946 218 32 32 0 chr17 47317448 47317479 -47955172 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 9 946 433 389 97 19 chr17 47317481 47317843 -47954808 + L1MC LINE L1 5264 5653 -2229 9 946 185 108 27 0 chr17 47318122 47318159 -47954492 + (TG)n Simple_repeat Simple_repeat 1 38 0 9 946 692 242 14 85 chr17 47318176 47318388 -47954263 - B4A SINE B4 -5 287 91 9 946 505 279 8 69 chr17 47318434 47318565 -47954086 + ID_B1 SINE B4 90 212 -12 9 946 268 264 19 178 chr17 47318565 47318583 -47954068 - YREP_Mm Unknown Unknown -1505 272 176 9 946 406 237 98 73 chr17 47318714 47318919 -47953732 + RLTR21 LTR ERVK 1099 1308 -264 9 946 180 111 0 0 chr17 47318919 47318946 -47953705 + (TATG)n Simple_repeat Simple_repeat 3 29 0 9 946 337 366 14 5 chr17 47319459 47319600 -47953051 + MIRc SINE MIR 31 166 -102 9 946 199 211 26 0 chr17 47320145 47320183 -47952468 - L2b LINE L2 -214 3161 3123 9 946 1260 41 0 0 chr17 47320331 47320477 -47952174 - B1_Mus2 SINE Alu -1 146 1 9 946 313 219 119 50 chr17 47320538 47320639 -47952012 + PB1D10 SINE Alu 1 108 -12 9 946 869 263 11 0 chr17 47320656 47320831 -47951820 + ID_B1 SINE B4 3 179 -45 9 946 340 323 13 68 chr17 47320739 47320887 -47951764 + PB1D10 SINE Alu 7 149 0 9 946 582 229 49 0 chr17 47321731 47321853 -47950798 + B1_Mur2 SINE Alu 3 130 -19 9 946 629 246 63 20 chr17 47321886 47322063 -47950588 + ID_B1 SINE B4 43 223 -1 9 946 805 218 0 0 chr17 47322388 47322535 -47950116 - B1_Mur2 SINE Alu -2 147 1 9 946 40 0 0 0 chr17 47323021 47323061 -47949590 + AT_rich Low_complexity Low_complexity 1 40 0 9 946 675 203 100 13 chr17 47323068 47323218 -47949433 - RSINE1 SINE B4 0 165 3 9 946 224 321 103 37 chr17 47323260 47323396 -47949255 + MIRc SINE MIR 19 163 -105 9 946 181 237 98 73 chr17 47323819 47323901 -47948750 - MIRc SINE MIR -75 193 110 9 946 1744 197 37 37 chr17 47324010 47324384 -47948267 - ORR1D1 LTR MaLR 0 374 1 9 946 437 162 0 0 chr17 47324668 47324736 -47947915 - ID_B1 SINE B4 -2 222 155 9 946 243 0 0 0 chr17 47324736 47324763 -47947888 + (ATG)n Simple_repeat Simple_repeat 3 29 0 9 946 495 0 0 0 chr17 47324763 47324818 -47947833 + (TG)n Simple_repeat Simple_repeat 2 56 0 9 946 336 206 28 0 chr17 47324830 47324908 -47947743 - B3A SINE B2 -57 159 76 9 946 726 123 23 12 chr17 47325182 47325355 -47947296 + (TG)n Simple_repeat Simple_repeat 2 176 0 9 946 844 122 0 37 chr17 47325369 47325556 -47947095 + (TG)n Simple_repeat Simple_repeat 1 180 0 9 946 391 262 39 0 chr17 47325569 47325672 -47946979 + U6 snRNA snRNA 1 107 0 9 946 376 266 0 0 chr17 47325675 47325754 -47946897 + B4A SINE B4 206 284 -8 9 946 997 167 16 86 chr17 47325711 47325979 -47946672 - ORR1D1 LTR MaLR -28 356 98 9 946 241 284 235 0 chr17 47326457 47326559 -47946092 + MIR3 SINE MIR 34 159 -49 9 946 719 238 91 19 chr17 47327277 47327487 -47945164 + B4 SINE B4 2 226 -66 9 946 180 185 0 0 chr17 47327669 47327723 -47944928 + (TG)n Simple_repeat Simple_repeat 1 54 0 9 946 297 244 12 82 chr17 47327729 47327814 -47944837 - B4 SINE B4 0 292 214 9 946 245 298 0 0 chr17 47327818 47327875 -47944776 + polypyrimidine Low_complexity Low_complexity 4 60 0 9 946 472 276 98 11 chr17 47327877 47328017 -47944634 - B4 SINE B4 -59 233 85 9 946 458 238 24 12 chr17 47328019 47328189 -47944462 + C-rich Low_complexity Low_complexity 4 175 0 9 946 189 169 33 17 chr17 47328207 47328267 -47944384 + C-rich Low_complexity Low_complexity 3 63 0 9 946 231 301 27 14 chr17 47328347 47328421 -47944230 + MIRb SINE MIR 115 189 -79 9 946 959 206 88 0 chr17 47329746 47329940 -47942711 - B3 SINE B2 -5 211 1 9 946 210 327 18 0 chr17 47330346 47330401 -47942250 + ID4_ SINE ID 17 72 -11 9 946 245 318 9 18 chr17 47330436 47330548 -47942103 + (TG)n Simple_repeat Simple_repeat 1 111 0 9 946 413 278 38 128 chr17 47330561 47330776 -47941875 - B4A SINE B4 -6 286 98 9 946 183 42 0 0 chr17 47330776 47330800 -47941851 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 9 946 1144 68 0 0 chr17 47330801 47330949 -47941702 - B1_Mus1 SINE Alu 0 148 1 9 946 413 278 38 128 chr17 47330949 47331044 -47941607 - B4A SINE B4 -195 97 2 9 946 380 263 17 8 chr17 47331047 47331166 -47941485 - PB1D7 SINE Alu 0 120 1 9 946 180 0 0 0 chr17 47331520 47331540 -47941111 + (A)n Simple_repeat Simple_repeat 1 20 0 9 946 209 200 0 53 chr17 47331789 47331884 -47940767 + CT-rich Low_complexity Low_complexity 2 91 0 9 946 243 0 0 0 chr17 47331890 47331917 -47940734 + (TATG)n Simple_repeat Simple_repeat 2 28 0 9 946 697 254 90 5 chr17 47331920 47332151 -47940500 - L1M2 LINE L1 -1177 4963 4708 9 946 283 339 23 31 chr17 47332274 47332402 -47940249 - PB1 SINE Alu 0 127 1 9 946 791 154 71 32 chr17 47332435 47332589 -47940062 - B3 SINE B2 -44 172 13 9 946 321 265 24 0 chr17 47332517 47332600 -47940051 - RSINE1 SINE B4 -79 86 2 9 946 326 229 164 9 chr17 47332665 47332775 -47939876 - RSINE1 SINE B4 -38 127 1 9 946 451 232 61 6 chr17 47332785 47332950 -47939701 - L1M2 LINE L1 -1616 4527 4354 9 946 260 254 0 27 chr17 47333237 47333310 -47939341 + ID4 SINE ID 3 73 -10 9 946 873 276 62 31 chr17 47334363 47334621 -47938030 + B4 SINE B4 1 266 -26 9 946 540 65 0 0 chr17 47334628 47334705 -47937946 + (CA)n Simple_repeat Simple_repeat 2 78 0 9 946 358 257 90 56 chr17 47335415 47335559 -47937092 + B1F SINE Alu 1 149 0 9 946 263 200 113 14 chr17 47335603 47335674 -47936977 + PB1D10 SINE Alu 40 117 0 9 946 419 78 0 15 chr17 47335743 47335808 -47936843 + (TG)n Simple_repeat Simple_repeat 1 64 0 9 946 266 86 0 0 chr17 47335808 47335843 -47936808 - B4 SINE B4 -22 270 236 9 946 221 242 84 42 chr17 47336074 47336169 -47936482 - MIR3 SINE MIR -24 184 86 9 946 233 239 32 0 chr17 47336772 47336835 -47935816 + MIRc SINE MIR 111 177 -85 9 946 510 61 0 0 chr17 47337043 47337109 -47935542 + (CA)n Simple_repeat Simple_repeat 1 66 0 9 946 548 162 143 0 chr17 47337259 47337364 -47935287 + B1_Mus1 SINE Alu 26 145 -3 9 946 625 287 15 0 chr17 47337373 47337509 -47935142 + RSINE1 SINE B4 3 140 -25 9 946 183 42 0 0 chr17 47337627 47337651 -47935000 + (TAA)n Simple_repeat Simple_repeat 1 24 0 9 946 305 95 0 0 chr17 47338027 47338069 -47934582 + B2_Mm2 SINE B2 1 42 -153 9 946 2038 86 52 82 chr17 47338069 47338335 -47934316 + ORR1A2 LTR MaLR 1 282 -45 9 946 1109 90 0 7 chr17 47338335 47338481 -47934170 + B1_Mm SINE Alu 3 147 0 9 946 2038 86 52 82 chr17 47338481 47338543 -47934108 + ORR1A2 LTR MaLR 283 319 -8 9 946 680 253 110 22 chr17 47338526 47338708 -47933943 + B3 SINE B2 19 216 0 9 946 210 217 29 118 chr17 47339209 47339277 -47933374 + L2b LINE L2 3225 3286 -89 9 946 612 73 0 0 chr17 47339584 47339666 -47932985 + (GA)n Simple_repeat Simple_repeat 1 82 0 9 946 561 236 8 39 chr17 47339678 47339806 -47932845 - RSINE1 SINE B4 -8 157 34 9 946 288 77 0 0 chr17 47339973 47340012 -47932639 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 9 946 189 266 73 42 chr17 47340111 47340242 -47932409 - L2b LINE L2 -94 3332 3196 9 946 446 0 0 18 chr17 47340683 47340738 -47931913 + (TG)n Simple_repeat Simple_repeat 2 55 0 9 946 949 276 33 22 chr17 47340742 47341013 -47931638 - B4A SINE B4 -18 274 1 9 946 518 314 43 7 chr17 47343185 47343326 -47929325 - B1F SINE Alu 0 149 4 9 946 444 311 29 46 chr17 47343326 47343359 -47929292 - ID_B1 SINE B4 0 223 53 9 946 687 261 12 6 chr17 47343705 47343867 -47928784 + RSINE1 SINE B4 3 165 0 9 946 549 160 0 0 chr17 47343867 47343973 -47928678 + (CA)n Simple_repeat Simple_repeat 1 106 0 9 946 186 189 0 0 chr17 47344086 47344123 -47928528 + T-rich Low_complexity Low_complexity 1 37 0 9 946 246 105 0 0 chr17 47344122 47344160 -47928491 + (TCC)n Simple_repeat Simple_repeat 2 39 0 9 946 923 134 0 27 chr17 47344164 47344252 -47928399 + polypyrimidine Low_complexity Low_complexity 96 180 0 9 946 1053 123 0 0 chr17 47344252 47344431 -47928220 + (TCC)n Simple_repeat Simple_repeat 1 179 0 9 946 923 134 0 27 chr17 47344431 47344526 -47928125 + polypyrimidine Low_complexity Low_complexity 2 95 0 9 946 1014 204 104 8 chr17 47344527 47344744 -47927907 - ID_B1 SINE B4 -46 246 12 9 946 450 0 0 0 chr17 47344901 47344951 -47927700 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 9 946 446 310 39 44 chr17 47345476 47345658 -47926993 + RCHARR1 DNA MER1_type 24 204 -770 9 946 235 279 0 16 chr17 47345648 47345710 -47926941 - RSINE1 SINE B4 -103 62 2 9 946 1031 232 108 22 chr17 47346692 47346961 -47925690 + B4 SINE B4 1 292 0 9 946 336 370 143 8 chr17 47347401 47347652 -47924999 - L1MC LINE L1 -2188 5694 5410 1 946 1215 48 0 0 chr17 47348177 47348324 -47924327 - B1_Mus2 SINE Alu 0 147 1 1 946 400 302 70 57 chr17 47348371 47348529 -47924122 + MER20 DNA MER1_type 1 160 -59 1 946 888 283 9 0 chr17 47348921 47349133 -47923518 - B3 SINE B2 -1 215 2 1 946 623 200 58 29 chr17 47350333 47350472 -47922179 + B1_Mur1 SINE Alu 1 143 -6 1 946 771 11 0 0 chr17 47350484 47350572 -47922079 + (GGAAA)n Simple_repeat Simple_repeat 4 91 0 1 946 321 238 0 0 chr17 47350717 47350797 -47921854 + (TG)n Simple_repeat Simple_repeat 1 80 0 1 946 342 222 305 16 chr17 47350797 47350925 -47921726 - RSINE1 SINE B4 0 165 1 1 946 207 322 166 49 chr17 47351118 47351281 -47921370 - MIR3 SINE MIR -15 193 12 1 946 271 347 149 46 chr17 47351402 47351586 -47921065 + L2a LINE L2 2938 3125 -301 1 946 1192 29 0 0 chr17 47351586 47351723 -47920928 - B1_Mus2 SINE Alu -9 138 2 1 946 271 347 149 46 chr17 47351723 47351973 -47920678 + L2a LINE L2 3126 3417 -9 1 946 268 164 0 29 chr17 47351978 47352047 -47920604 + GA-rich Low_complexity Low_complexity 3 69 0 1 946 427 231 46 37 chr17 47352072 47352180 -47920471 + ID_B1 SINE B4 15 123 -101 1 946 715 226 144 0 chr17 47352302 47352483 -47920168 + B3 SINE B2 1 207 -9 1 946 576 106 0 0 chr17 47352486 47352571 -47920080 + (GGAA)n Simple_repeat Simple_repeat 3 87 0 1 946 324 310 92 8 chr17 47352909 47353039 -47919612 + MIR3 SINE MIR 20 160 -48 1 946 375 256 68 29 chr17 47353320 47353598 -47919053 + RMER17D2 LTR ERVK 258 546 -263 1 946 286 232 122 0 chr17 47353885 47353967 -47918684 - MER45B DNA Tip100 0 1040 949 1 946 658 276 41 15 chr17 47354263 47354458 -47918193 + B3 SINE B2 11 210 -6 1 946 829 113 53 60 chr17 47354460 47354487 -47918164 + B1_Mur4 SINE Alu 1 27 -123 1 946 2989 48 65 0 chr17 47354487 47354859 -47917792 + MTA_Mm LTR MaLR 1 396 0 1 946 829 113 53 60 chr17 47354859 47354956 -47917695 + B1_Mur4 SINE Alu 28 119 -31 1 946 351 0 0 0 chr17 47354956 47354995 -47917656 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 946 829 113 53 60 chr17 47354995 47355020 -47917631 + B1_Mur4 SINE Alu 120 149 -1 1 946 237 139 0 0 chr17 47355162 47355198 -47917453 + ID SINE ID 9 44 -180 1 946 426 223 139 26 chr17 47355287 47355402 -47917249 - B3 SINE B2 -5 211 84 1 946 523 255 152 0 chr17 47355362 47355507 -47917144 + ID_B1 SINE B4 57 223 -1 1 946 233 276 0 79 chr17 47355686 47355749 -47916902 - ID2 SINE ID 0 83 26 1 946 462 36 0 0 chr17 47356176 47356232 -47916419 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 946 793 283 76 69 chr17 47356245 47356534 -47916117 - B4 SINE B4 -1 291 1 1 946 331 286 33 11 chr17 47356537 47356629 -47916022 - PB1D7 SINE Alu -26 94 1 1 946 363 193 0 0 chr17 47356648 47356731 -47915920 + (TTG)n Simple_repeat Simple_repeat 2 84 0 1 946 312 301 67 94 chr17 47356797 47356977 -47915674 - LTR33 LTR ERVL 0 515 341 1 946 401 267 57 0 chr17 47357295 47357400 -47915251 + B1F SINE Alu 23 133 -16 1 946 295 347 25 25 chr17 47357400 47357416 -47915235 + ID_B1 SINE B4 104 224 0 1 946 186 133 0 0 chr17 47357428 47357458 -47915193 + (GGAGAA)n Simple_repeat Simple_repeat 3 32 0 1 946 905 226 6 12 chr17 47357470 47357546 -47915105 + ID SINE ID 5 79 -145 1 946 441 283 28 19 chr17 47357546 47357654 -47914997 + PB1D10 SINE Alu 1 109 -8 1 946 239 286 0 0 chr17 47357689 47357738 -47914913 + B4A SINE B4 11 59 -233 1 946 781 186 0 8 chr17 47357741 47357871 -47914780 + B1_Mur3 SINE Alu 11 139 -10 1 946 282 330 33 50 chr17 47358136 47358261 -47914390 + L2c LINE L2 3040 3165 -222 1 946 459 281 82 45 chr17 47359593 47359727 -47912924 - RSINE1 SINE B4 -2 163 25 1 946 183 80 0 0 chr17 47360191 47360216 -47912435 + (TGGGGG)n Simple_repeat Simple_repeat 4 28 0 1 946 245 292 0 40 chr17 47360458 47360533 -47912118 + RMER12 LTR ERVK 749 820 -502 1 946 294 243 95 0 chr17 47360537 47360611 -47912040 - ID4 SINE ID -2 81 1 1 946 22 35 0 0 chr17 47360613 47360642 -47912009 + AT_rich Low_complexity Low_complexity 1 29 0 1 946 763 225 68 45 chr17 47360740 47360917 -47911734 - B3 SINE B2 -5 211 31 1 946 216 368 19 111 chr17 47360967 47361057 -47911594 - RSINE1 SINE B4 -8 157 71 1 946 311 256 110 89 chr17 47361057 47361203 -47911448 - B1F1 SINE Alu 0 149 1 1 946 360 247 55 0 chr17 47361203 47361276 -47911375 - B4 SINE B4 -208 84 8 1 946 403 236 217 54 chr17 47361648 47361814 -47910837 - B3A SINE B2 -5 193 1 1 946 798 213 17 17 chr17 47361959 47362156 -47910495 - B3 SINE B2 0 195 2 1 946 23 0 0 0 chr17 47362436 47362459 -47910192 + AT_rich Low_complexity Low_complexity 1 23 0 1 946 530 208 45 30 chr17 47362556 47362690 -47909961 - ID_B1 SINE B4 -88 136 1 1 946 313 274 198 88 chr17 47364198 47364390 -47908261 + B4 SINE B4 63 275 -17 1 946 492 32 0 0 chr17 47364407 47364469 -47908182 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 946 1188 41 7 7 chr17 47364529 47364676 -47907975 - B1_Mus2 SINE Alu 0 147 1 1 946 1107 52 0 0 chr17 47365720 47365856 -47906795 - B1_Mus2 SINE Alu -3 144 9 1 946 291 383 8 24 chr17 47366091 47366214 -47906437 - L2 LINE L2 -739 2680 2560 1 946 3636 119 124 50 chr17 47366218 47366911 -47905740 + RMER6A LTR ERVK 1 744 -12 1 946 1241 54 0 0 chr17 47367616 47367763 -47904888 + B1_Mus2 SINE Alu 1 147 0 1 946 600 270 62 51 chr17 47367777 47367972 -47904679 - B3A SINE B2 0 198 2 1 946 602 320 22 17 chr17 47367976 47368208 -47904443 + MTEb LTR MaLR 7 239 -140 1 946 574 142 88 9 chr17 47368161 47368275 -47904376 + ID_B1 SINE B4 89 211 -13 1 946 315 317 38 75 chr17 47368251 47368384 -47904267 + MTEb LTR MaLR 142 269 -110 1 946 590 249 31 8 chr17 47368540 47368697 -47903954 - B3A SINE B2 -22 171 1 1 946 458 238 198 28 chr17 47368789 47368966 -47903685 - ID_B1 SINE B4 -1 223 17 1 946 263 167 80 40 chr17 47369498 47369573 -47903078 + ID4 SINE ID 5 82 -1 1 946 803 117 0 0 chr17 47369696 47369807 -47902844 + B1_Mur3 SINE Alu 1 111 -38 1 946 519 82 0 0 chr17 47369818 47369891 -47902760 + (GA)n Simple_repeat Simple_repeat 2 74 0 1 946 241 248 317 0 chr17 47370361 47370462 -47902189 + MIRb SINE MIR 134 266 -2 1 946 463 306 67 90 chr17 47372010 47372298 -47900353 + B4A SINE B4 11 291 -1 1 946 180 0 0 0 chr17 47372301 47372321 -47900330 + (TCTCTG)n Simple_repeat Simple_repeat 6 25 0 1 946 929 264 73 8 chr17 47372382 47372630 -47900021 - B4A SINE B4 -27 265 2 1 946 297 250 28 111 chr17 47372859 47372967 -47899684 + B4A SINE B4 13 111 -181 1 946 600 225 59 214 chr17 47373304 47373575 -47899076 - MTE2a LTR MaLR -147 232 4 1 946 441 0 0 0 chr17 47374052 47374101 -47898550 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 946 504 266 59 153 chr17 47374208 47374559 -47898092 - RMER20B LTR ERVK -97 530 219 1 946 30 27 0 0 chr17 47374729 47374766 -47897885 + AT_rich Low_complexity Low_complexity 1 37 0 1 946 1516 58 21 0 chr17 47374774 47374965 -47897686 - B2_Mm2 SINE B2 0 195 1 1 946 243 0 0 0 chr17 47374970 47374997 -47897654 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 946 421 289 190 0 chr17 47375000 47375142 -47897509 - B3A SINE B2 -28 170 2 1 946 215 139 28 0 chr17 47375186 47375222 -47897429 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 946 180 0 0 0 chr17 47375560 47375580 -47897071 + (TGG)n Simple_repeat Simple_repeat 1 20 0 1 946 2168 106 0 70 chr17 47375652 47375997 -47896654 + ORR1A4 LTR MaLR 1 321 -8 1 946 663 255 14 0 chr17 47376180 47376325 -47896326 - RSINE1 SINE B4 -16 149 3 1 946 642 222 140 45 chr17 47376401 47376580 -47896071 - B3A SINE B2 0 198 3 1 946 553 189 108 0 chr17 47376913 47377024 -47895627 + B1_Mur1 SINE Alu 12 134 -15 1 946 691 196 173 19 chr17 47377032 47377340 -47895311 - MT2A LTR ERVL -8 525 118 1 946 321 162 0 0 chr17 47377342 47377410 -47895241 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 946 813 270 180 86 chr17 47378140 47378545 -47894106 - MT2A LTR ERVL -90 443 1 1 946 421 303 129 34 chr17 47378670 47378933 -47893718 - B4A SINE B4 -3 289 2 1 946 264 303 0 22 chr17 47378965 47379056 -47893595 + GA-rich Low_complexity Low_complexity 6 94 0 1 946 665 251 17 39 chr17 47379569 47379747 -47892904 + B4A SINE B4 118 291 -1 1 946 224 213 0 0 chr17 47379768 47379815 -47892836 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 946 575 230 44 44 chr17 47380090 47380249 -47892402 + RSINE1 SINE B4 7 165 0 1 946 279 0 0 0 chr17 47380327 47380358 -47892293 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 946 279 0 0 0 chr17 47380358 47380388 -47892263 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 946 2344 100 14 17 chr17 47380660 47381015 -47891636 - ORR1B1 LTR MaLR 0 394 41 1 946 475 272 49 43 chr17 47381246 47381447 -47891204 + ID_B1 SINE B4 21 216 -8 1 946 226 244 0 0 chr17 47381447 47381492 -47891159 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 1 946 225 65 0 0 chr17 47381492 47381523 -47891128 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 946 846 303 134 6 chr17 47382543 47382872 -47889779 - MTEa LTR MaLR 0 379 9 1 946 221 308 0 0 chr17 47383421 47383473 -47889178 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 946 183 80 0 0 chr17 47383482 47383507 -47889144 + (TTTCC)n Simple_repeat Simple_repeat 4 28 0 1 946 321 183 0 0 chr17 47383507 47383567 -47889084 - B1_Mur3 SINE Alu 0 149 90 1 946 460 271 68 0 chr17 47383898 47384031 -47888620 + B3A SINE B2 6 147 -51 1 946 468 156 0 0 chr17 47384034 47384124 -47888527 + (TG)n Simple_repeat Simple_repeat 1 90 0 1 946 582 186 210 0 chr17 47384348 47384472 -47888179 + B1_Mur4 SINE Alu 1 150 0 1 946 301 314 99 63 chr17 47384735 47384987 -47887664 - HAL1-2a_MD LINE L1 -572 2452 2192 1 946 351 0 0 0 chr17 47385029 47385068 -47887583 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 946 243 0 0 0 chr17 47385068 47385094 -47887557 + (GA)n Simple_repeat Simple_repeat 1 27 0 1 946 892 264 85 4 chr17 47385094 47385341 -47887310 - B4A SINE B4 -25 267 1 1 946 731 257 19 34 chr17 47387295 47387504 -47885147 - ID_B1 SINE B4 -18 206 1 1 946 1023 158 107 10 chr17 47387745 47387950 -47884701 - URR1B DNA MER1_type 0 225 1 1 946 778 312 25 50 chr17 47388259 47388539 -47884112 + B4 SINE B4 1 273 -19 1 946 239 288 25 0 chr17 47388656 47388736 -47883915 + PB1 SINE Alu 44 125 -2 1 946 235 333 0 0 chr17 47388843 47388915 -47883736 + MIRc SINE MIR 71 142 -126 1 946 400 373 50 46 chr17 47389271 47389510 -47883141 + Tigger16b DNA Tigger 93 332 -5 1 946 342 320 122 8 chr17 47389930 47390053 -47882598 + ID_B1 SINE B4 2 138 -86 1 946 253 323 61 0 chr17 47390000 47390099 -47882552 + PB1D10 SINE Alu 5 109 -8 1 946 190 349 46 11 chr17 47390137 47390224 -47882427 + L3 LINE CR1 4265 4354 -135 1 946 300 53 0 0 chr17 47390666 47390704 -47881947 + (CTTTG)n Simple_repeat Simple_repeat 2 39 0 1 946 972 117 0 0 chr17 47390706 47390843 -47881808 - B1_Mur4 SINE Alu -13 137 1 1 946 23 33 0 0 chr17 47391086 47391116 -47881535 + AT_rich Low_complexity Low_complexity 1 30 0 1 946 390 271 67 60 chr17 47392335 47392461 -47880190 + RSINE1 SINE B4 3 126 -39 1 946 513 32 0 0 chr17 47392461 47392524 -47880127 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 946 390 271 67 60 chr17 47392524 47392546 -47880105 + RSINE1 SINE B4 127 151 -14 1 946 947 258 21 38 chr17 47392597 47392887 -47879764 + B4A SINE B4 3 287 -5 1 946 885 258 149 25 chr17 47393374 47393696 -47878955 - MTEa LTR MaLR 0 379 18 1 946 224 217 65 32 chr17 47393886 47393948 -47878703 - B1F2 SINE Alu -52 97 34 1 946 525 246 25 0 chr17 47394379 47394501 -47878150 + ID_B1 SINE B4 86 210 -14 1 946 618 270 153 8 chr17 47394640 47394894 -47877757 + B4A SINE B4 2 292 0 1 946 231 229 0 0 chr17 47395094 47395142 -47877509 + B1_Mur1 SINE Alu 95 142 -7 1 946 602 272 97 15 chr17 47395410 47395679 -47876972 + B4A SINE B4 2 292 0 1 946 379 302 146 15 chr17 47395742 47395947 -47876704 - RMER12 LTR ERVK -334 988 757 1 946 397 325 8 16 chr17 47396316 47396444 -47876207 - ID_B1 SINE B4 -14 210 84 1 946 21 0 0 0 chr17 47396824 47396845 -47875806 + AT_rich Low_complexity Low_complexity 1 21 0 1 946 335 287 45 18 chr17 47396865 47396975 -47875676 - RSINE1 SINE B4 -51 114 2 1 946 825 224 43 86 chr17 47397175 47397478 -47875173 - B4A SINE B4 0 292 3 1 946 228 265 29 14 chr17 47397533 47397602 -47875049 + MIRm SINE MIR 203 272 -4 1 946 744 42 0 0 chr17 47398235 47398331 -47874320 + (TG)n Simple_repeat Simple_repeat 2 97 0 1 946 370 255 0 39 chr17 47398866 47398968 -47873683 - B3A SINE B2 -100 98 1 1 946 282 280 27 36 chr17 47399475 47399586 -47873065 - MLT1A1 LTR MaLR 0 408 299 1 946 383 291 165 104 chr17 47399808 47399917 -47872734 - MTEa LTR MaLR 0 379 276 1 946 1609 162 189 8 chr17 47399917 47400272 -47872379 - MTD LTR MaLR 0 419 1 1 946 383 291 165 104 chr17 47400272 47400519 -47872132 - MTEa LTR MaLR -104 275 1 1 946 267 325 12 0 chr17 47400699 47400779 -47871872 - ID4 SINE ID -1 82 2 1 946 310 286 86 35 chr17 47401016 47401132 -47871519 - L1M LINE L1 -743 5381 5260 1 946 230 281 0 0 chr17 47402011 47402068 -47870583 + ID4 SINE ID 5 61 -22 1 946 204 158 0 0 chr17 47402084 47402122 -47870529 + GA-rich Low_complexity Low_complexity 2 39 0 1 946 434 296 27 18 chr17 47402191 47402301 -47870350 - B4 SINE B4 -4 288 178 1 946 936 229 5 19 chr17 47402761 47402970 -47869681 - B3 SINE B2 -8 208 3 1 946 218 273 0 0 chr17 47403508 47403563 -47869088 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 946 265 284 77 19 chr17 47403569 47403673 -47868978 - PB1D10 SINE Alu -7 110 1 1 946 351 289 18 30 chr17 47404707 47404871 -47867780 - L1MA4 LINE L1 -370 5930 5769 1 946 548 218 139 56 chr17 47404892 47405072 -47867579 - B3A SINE B2 0 198 4 1 946 229 281 35 35 chr17 47405082 47405167 -47867484 - L1MA4 LINE L1 -518 5779 5695 1 946 183 347 40 40 chr17 47405177 47405276 -47867375 - L2c LINE L2 -17 3370 3272 1 946 294 254 0 0 chr17 47405814 47405881 -47866770 + ID_B1 SINE B4 104 170 -54 1 946 808 168 20 28 chr17 47406840 47407203 -47865448 + (TATG)n Simple_repeat Simple_repeat 1 359 0 1 946 394 232 184 0 chr17 47407246 47407371 -47865280 - B1_Mur2 SINE Alu -1 148 1 1 946 606 274 70 94 chr17 47407418 47407846 -47864805 - MTC LTR MaLR -7 400 1 1 946 373 191 282 17 chr17 47407878 47407995 -47864656 + B1F SINE Alu 2 149 0 1 946 522 284 13 4 chr17 47407996 47408125 -47864526 + ID_B1 SINE B4 85 224 -68 1 946 605 202 220 0 chr17 47408383 47408556 -47864095 + MTC LTR MaLR 1 211 -210 1 946 671 174 20 53 chr17 47408556 47408708 -47863943 + B1_Mus1 SINE Alu 2 148 0 1 946 952 132 6 6 chr17 47408714 47408881 -47863770 + (GGA)n Simple_repeat Simple_repeat 3 169 0 1 946 737 230 90 38 chr17 47408881 47409093 -47863558 + MTC LTR MaLR 199 421 0 1 946 1005 202 27 9 chr17 47409364 47409584 -47863067 + ID_B1 SINE B4 1 224 0 1 946 314 339 54 81 chr17 47409792 47410090 -47862561 - L1MEd LINE L1 -4994 1125 836 1 946 505 262 67 82 chr17 47410412 47410694 -47861957 - B4 SINE B4 -13 279 2 1 946 577 299 22 17 chr17 47411122 47411302 -47861349 + B3A SINE B2 2 182 -16 1 946 23 0 0 0 chr17 47411309 47411332 -47861319 + AT_rich Low_complexity Low_complexity 1 23 0 1 946 244 323 0 0 chr17 47411339 47411404 -47861247 - MER20 DNA MER1_type -153 66 2 1 946 315 0 0 0 chr17 47411579 47411614 -47861037 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 946 238 345 31 78 chr17 47411616 47411745 -47860906 - RSINE1 SINE B4 0 165 43 1 946 23 33 0 0 chr17 47411955 47411985 -47860666 + AT_rich Low_complexity Low_complexity 1 30 0 1 946 332 326 80 0 chr17 47412062 47412200 -47860451 + MER2 DNA MER2_type 91 239 -106 1 946 406 248 119 8 chr17 47412310 47412444 -47860207 + RSINE1 SINE B4 1 149 -16 1 946 239 122 0 20 chr17 47412464 47412514 -47860137 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 946 624 203 0 24 chr17 47412568 47412694 -47859957 - B1_Mur2 SINE Alu -3 146 24 1 946 335 360 0 38 chr17 47413515 47413700 -47858951 + GA-rich Low_complexity Low_complexity 2 179 0 1 946 195 100 0 0 chr17 47414139 47414169 -47858482 + (C)n Simple_repeat Simple_repeat 1 30 0 1 946 367 72 0 68 chr17 47414584 47414658 -47857993 + (CCCCCT)n Simple_repeat Simple_repeat 6 74 0 1 946 325 289 64 45 chr17 47414662 47414818 -47857833 - B4 SINE B4 -8 284 126 1 946 411 216 125 178 chr17 47415078 47415135 -47857516 + B3A SINE B2 1 36 -162 1 946 619 196 0 133 chr17 47415135 47415300 -47857351 - B1_Mus1 SINE Alu -5 143 1 1 946 411 218 121 171 chr17 47415300 47415470 -47857181 + B3A SINE B2 32 197 -1 1 946 321 303 36 9 chr17 47415600 47415710 -47856941 - MER20 DNA MER1_type -16 203 91 1 946 441 0 0 0 chr17 47416416 47416465 -47856186 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 946 563 250 47 7 chr17 47416468 47416617 -47856034 - B3A SINE B2 -43 155 1 1 946 262 282 131 21 chr17 47417043 47417188 -47855463 - RSINE1 SINE B4 -2 163 3 1 946 379 291 26 0 chr17 47417264 47417381 -47855270 - PB1D7 SINE Alu 0 120 1 1 946 324 298 68 41 chr17 47417558 47417705 -47854946 + MIRb SINE MIR 109 259 -9 1 946 998 76 0 0 chr17 47417815 47417947 -47854704 + B1_Mus2 SINE Alu 2 133 -14 1 946 312 27 0 0 chr17 47418228 47418265 -47854386 + (TTTG)n Simple_repeat Simple_repeat 3 39 0 1 946 644 168 84 0 chr17 47418267 47418398 -47854253 - B1_Mur3 SINE Alu -7 142 1 1 946 424 267 0 49 chr17 47418455 47418577 -47854074 - RSINE1 SINE B4 -6 159 44 1 946 533 212 33 33 chr17 47418855 47418977 -47853674 + RSINE1 SINE B4 2 123 -42 1 946 469 0 33 0 chr17 47419007 47419068 -47853583 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 1 946 391 327 37 6 chr17 47419143 47419306 -47853345 - MTE2b LTR MaLR -27 352 185 1 946 523 176 8 16 chr17 47419342 47419463 -47853188 + CT-rich Low_complexity Low_complexity 2 121 0 1 946 366 267 122 7 chr17 47419788 47419935 -47852716 + RSINE1 SINE B4 2 165 0 1 946 188 154 19 0 chr17 47419942 47419994 -47852657 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 946 196 260 162 38 chr17 47420308 47420388 -47852263 + MIRc SINE MIR 44 133 -135 1 946 289 43 43 0 chr17 47420419 47420466 -47852185 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 946 225 359 95 20 chr17 47420491 47420639 -47852012 - B4 SINE B4 -70 222 64 1 946 447 223 11 103 chr17 47420868 47421043 -47851608 - B4A SINE B4 0 292 134 1 946 225 94 0 0 chr17 47421801 47421833 -47850818 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 946 207 247 35 0 chr17 47421866 47421951 -47850700 + (TA)n Simple_repeat Simple_repeat 1 88 0 1 946 345 257 14 0 chr17 47421985 47422059 -47850592 + RSINE1 SINE B4 66 140 -25 1 946 456 319 43 27 chr17 47422154 47422338 -47850313 - B3 SINE B2 -8 208 22 1 946 354 306 56 8 chr17 47422370 47422495 -47850156 + B4 SINE B4 5 135 -157 1 946 372 250 56 40 chr17 47423937 47424062 -47848589 + MT2B LTR ERVL 153 279 -322 1 946 600 205 48 16 chr17 47423958 47424082 -47848569 + B1_Mur1 SINE Alu 14 141 -8 1 946 518 319 153 42 chr17 47424111 47424373 -47848278 + B4 SINE B4 1 291 -1 1 946 201 39 0 0 chr17 47424388 47424414 -47848237 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 946 545 302 31 5 chr17 47424565 47424758 -47847893 + B3 SINE B2 19 216 0 1 946 1041 280 108 12 chr17 47424902 47425245 -47847406 - MTEb LTR MaLR -3 376 1 1 946 241 267 139 0 chr17 47425584 47425670 -47846981 + PB1D9 SINE Alu 21 118 -2 1 946 2377 95 0 0 chr17 47425720 47426047 -47846604 - ORR1A2 LTR MaLR 0 327 1 1 946 634 194 76 15 chr17 47426275 47426406 -47846245 - B1_Mur4 SINE Alu -2 148 10 1 946 333 267 28 37 chr17 47426700 47426809 -47845842 + PB1D10 SINE Alu 2 109 -8 1 946 26 0 0 0 chr17 47426948 47426974 -47845677 + AT_rich Low_complexity Low_complexity 1 26 0 1 946 274 288 118 40 chr17 47426974 47427202 -47845449 - L1MEe LINE L1 -4155 699 454 1 946 1129 239 144 25 chr17 47427382 47427708 -47844943 - MTE2b LTR MaLR -4 375 11 1 946 307 183 67 0 chr17 47427782 47427842 -47844809 - PB1D9 SINE Alu 0 120 57 1 946 490 189 11 0 chr17 47427901 47427991 -47844660 + 5S rRNA rRNA 1 91 -30 1 946 1153 263 98 14 chr17 47428960 47429307 -47843344 - MTD LTR MaLR -26 393 18 1 946 522 0 0 0 chr17 47429491 47429549 -47843102 + (TAGA)n Simple_repeat Simple_repeat 3 60 0 1 946 609 234 14 14 chr17 47429680 47429819 -47842832 + B1F1 SINE Alu 1 139 -10 1 946 330 285 63 35 chr17 47430132 47430274 -47842377 - RSINE1 SINE B4 -19 146 1 1 946 229 219 33 5 chr17 47430481 47430558 -47842093 - L2c LINE L2 -181 3194 3117 1 946 281 239 0 53 chr17 47431651 47431726 -47840925 - PB1D7 SINE Alu -9 111 41 1 946 218 250 0 0 chr17 47431751 47431795 -47840856 + (CGTG)n Simple_repeat Simple_repeat 4 47 0 1 946 395 243 234 7 chr17 47431797 47431938 -47840713 - B4 SINE B4 -5 287 115 1 946 707 161 27 27 chr17 47431942 47432089 -47840562 - B3 SINE B2 -67 149 3 1 946 185 310 69 35 chr17 47432225 47432312 -47840339 - MIRm SINE MIR -100 176 87 1 946 26 64 0 0 chr17 47433097 47433144 -47839507 + AT_rich Low_complexity Low_complexity 1 47 0 1 946 577 230 149 18 chr17 47433144 47433312 -47839339 - B3 SINE B2 -9 207 18 1 946 336 158 0 0 chr17 47433315 47433391 -47839260 + (TA)n Simple_repeat Simple_repeat 2 77 0 1 946 762 227 80 15 chr17 47434337 47434538 -47838113 + B3 SINE B2 2 215 -1 1 946 554 251 233 4 chr17 47434584 47434820 -47837831 + B4 SINE B4 1 290 -2 1 946 207 250 96 0 chr17 47434858 47434910 -47837741 - MIR SINE MIR -174 88 32 1 946 297 0 0 0 chr17 47434983 47435016 -47837635 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 1 946 288 213 105 13 chr17 47435042 47435118 -47837533 - B3A SINE B2 -5 193 111 1 946 344 224 23 12 chr17 47435651 47435737 -47836914 + ID_B1 SINE B4 138 224 0 1 946 380 281 11 111 chr17 47436215 47436235 -47836416 - B2_Mm1a SINE B2 -31 162 149 1 946 450 0 0 0 chr17 47436235 47436285 -47836366 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 946 741 202 0 17 chr17 47436285 47436444 -47836207 - B3A SINE B2 -47 151 1 1 946 249 250 0 0 chr17 47436921 47436977 -47835674 + CT-rich Low_complexity Low_complexity 4 59 0 1 946 763 120 56 0 chr17 47436988 47437113 -47835538 - B1_Mur3 SINE Alu -15 134 3 1 946 261 240 59 20 chr17 47437153 47437255 -47835396 - RSINE1 SINE B4 -38 127 22 1 946 346 310 27 27 chr17 47437681 47437827 -47834824 + B1_Mm SINE Alu 2 147 0 1 946 787 301 42 38 chr17 47440721 47441008 -47831643 - B4A SINE B4 -3 289 2 1 946 386 242 33 0 chr17 47441043 47441134 -47831517 - B1F2 SINE Alu -35 114 21 1 946 279 0 0 0 chr17 47442109 47442140 -47830511 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 946 396 0 0 0 chr17 47442140 47442183 -47830468 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 946 429 229 171 6 chr17 47442205 47442381 -47830270 - B4A SINE B4 -46 246 42 1 946 227 226 94 0 chr17 47443582 47443635 -47829016 + MIR3 SINE MIR 113 170 -38 1 946 1548 163 52 38 chr17 47443788 47444117 -47828534 - ORR1A3 LTR MaLR -1 378 1 1 946 348 180 48 16 chr17 47444118 47444180 -47828471 + ID_B1 SINE B4 146 209 -15 1 946 862 229 0 6 chr17 47444485 47444652 -47827999 - B3 SINE B2 -28 188 23 1 946 1079 145 42 21 chr17 47444665 47444855 -47827796 - B2_Mm2 SINE B2 -1 194 1 1 946 598 242 60 0 chr17 47444898 47445047 -47827604 - RSINE1 SINE B4 -7 158 1 1 946 208 362 41 46 chr17 47445567 47445761 -47826890 - L2 LINE L2 -591 2828 2636 1 946 434 264 43 55 chr17 47445763 47445927 -47826724 + RSINE1 SINE B4 4 165 0 1 946 675 263 20 49 chr17 47445955 47446159 -47826492 - B3A SINE B2 0 198 1 1 946 626 243 199 5 chr17 47446194 47446380 -47826271 + ID_B1 SINE B4 2 223 -1 1 946 646 306 46 7 chr17 47446494 47446680 -47825971 + B3A SINE B2 2 188 -7 1 946 2303 107 25 3 chr17 47446828 47447148 -47825503 - ORR1A2 LTR MaLR 0 327 1 1 946 1197 232 46 171 chr17 47447551 47447606 -47825045 - MTE2a LTR MaLR -1 378 335 1 946 1285 156 18 28 chr17 47447606 47447824 -47824827 + B3 SINE B2 1 216 0 1 118 1197 232 46 171 chr17 47447824 47448200 -47824451 - MTE2a LTR MaLR -45 334 1 1 947 459 190 97 29 chr17 47448463 47448566 -47824085 - PB1D10 SINE Alu -7 110 1 1 947 821 249 176 20 chr17 47448570 47449065 -47823586 - Charlie2b DNA MER1_type -43 2739 2168 1 947 796 201 95 0 chr17 47449109 47449298 -47823353 + ID_B1 SINE B4 2 208 -16 1 947 627 219 117 61 chr17 47449298 47449478 -47823173 + B3A SINE B2 8 197 -1 1 947 235 236 218 36 chr17 47449483 47449593 -47823058 - Charlie2b DNA MER1_type -668 2114 1985 1 947 741 237 22 6 chr17 47449615 47449793 -47822858 + B3A SINE B2 1 181 -17 1 947 296 213 0 96 chr17 47449975 47450058 -47822593 - Charlie2b DNA MER1_type -793 1989 1915 1 947 607 286 142 4 chr17 47450059 47450305 -47822346 + B4A SINE B4 2 281 -11 1 947 631 276 0 0 chr17 47450336 47450481 -47822170 - RSINE1 SINE B4 -18 147 3 1 947 1252 35 0 0 chr17 47450500 47450644 -47822007 - B1_Mus2 SINE Alu 0 147 4 1 947 216 185 0 0 chr17 47450929 47450983 -47821668 + T-rich Low_complexity Low_complexity 1 54 0 1 947 183 42 0 0 chr17 47451884 47451908 -47820743 + (CAG)n Simple_repeat Simple_repeat 3 26 0 1 947 204 111 0 0 chr17 47451927 47451963 -47820688 + (CAG)n Simple_repeat Simple_repeat 1 36 0 1 947 231 267 76 51 chr17 47452574 47452653 -47819998 - MIRm SINE MIR -28 248 168 1 947 229 242 0 180 chr17 47452755 47452811 -47819840 + B4 SINE B4 87 139 -153 1 947 585 42 0 0 chr17 47452811 47452883 -47819768 + (TAGA)n Simple_repeat Simple_repeat 3 74 0 1 947 229 242 0 180 chr17 47452883 47452937 -47819714 + B4 SINE B4 140 177 -115 1 947 264 30 0 0 chr17 47453484 47453517 -47819134 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 947 197 235 116 0 chr17 47453831 47453906 -47818745 - MIR SINE MIR -106 162 71 1 947 784 239 16 32 chr17 47454163 47454353 -47818298 + B3A SINE B2 7 193 -5 1 947 331 271 43 0 chr17 47454357 47454427 -47818224 + RSINE1 SINE B4 51 123 -42 1 947 333 0 0 0 chr17 47454429 47454466 -47818185 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 947 270 0 0 0 chr17 47454470 47454500 -47818151 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 947 224 224 20 0 chr17 47454523 47454572 -47818079 + MIRc SINE MIR 99 148 -120 1 947 532 196 149 14 chr17 47455402 47455571 -47817080 - B3 SINE B2 -7 188 3 1 947 660 221 7 22 chr17 47455612 47455751 -47816900 + B1_Mur1 SINE Alu 13 149 0 1 947 429 219 102 28 chr17 47455794 47455902 -47816749 + PB1D10 SINE Alu 1 116 -1 1 947 23 0 0 0 chr17 47456098 47456121 -47816530 + AT_rich Low_complexity Low_complexity 1 23 0 1 947 225 94 0 0 chr17 47456323 47456355 -47816296 + (CCCCAG)n Simple_repeat Simple_repeat 6 37 0 1 947 213 195 0 0 chr17 47456356 47456397 -47816254 + (CCG)n Simple_repeat Simple_repeat 3 43 0 1 947 213 108 0 0 chr17 47457524 47457561 -47815090 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 947 1118 107 18 12 chr17 47457743 47457760 -47814891 - B2_Mm2 SINE B2 -23 172 155 1 947 224 0 0 61 chr17 47457760 47457793 -47814858 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 1 947 1118 107 18 12 chr17 47457793 47457946 -47814705 - B2_Mm2 SINE B2 -41 154 1 1 947 411 240 195 52 chr17 47457962 47458116 -47814535 + Tigger5 DNA MER2_type 66 241 -2165 1 947 335 318 19 0 chr17 47458130 47458237 -47814414 + Tigger5 DNA MER2_type 2298 2406 0 1 947 189 234 0 96 chr17 47458751 47458803 -47813848 + L2 LINE L2 87 133 -3286 1 947 324 281 45 0 chr17 47461017 47461106 -47811545 + PB1 SINE Alu 24 116 -11 1 947 418 172 10 90 chr17 47461236 47461349 -47811302 + PB1D10 SINE Alu 21 128 -21 1 947 588 272 35 70 chr17 47462101 47462330 -47810321 - Tigger7 DNA MER2_type -2203 288 68 1 947 297 0 0 0 chr17 47462530 47462563 -47810088 + (T)n Simple_repeat Simple_repeat 1 33 0 1 947 1629 36 0 20 chr17 47463209 47463406 -47809245 + B2_Mm1a SINE B2 1 193 0 1 947 180 0 0 0 chr17 47464576 47464596 -47808055 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 947 291 248 28 47 chr17 47464642 47464748 -47807903 - MER5A1 DNA MER1_type 0 166 63 1 947 730 148 221 33 chr17 47464787 47464968 -47807683 - B3 SINE B2 0 216 2 1 947 664 252 79 0 chr17 47465111 47465250 -47807401 + B3 SINE B2 37 186 -30 1 947 699 240 15 80 chr17 47465268 47465467 -47807184 + B4 SINE B4 107 292 0 1 947 851 28 9 0 chr17 47466398 47466504 -47806147 + (GGAAA)n Simple_repeat Simple_repeat 1 107 0 1 947 407 34 0 48 chr17 47466532 47466594 -47806057 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 947 1400 92 16 0 chr17 47466785 47466970 -47805681 - B2_Mm2 SINE B2 -5 190 3 1 947 458 354 21 5 chr17 47466988 47467005 -47805646 - B3A SINE B2 0 198 182 1 947 216 97 0 0 chr17 47467005 47467036 -47805615 + (CCTG)n Simple_repeat Simple_repeat 1 31 0 1 947 458 354 21 5 chr17 47467036 47467211 -47805440 - B3A SINE B2 -17 181 4 1 947 254 323 20 30 chr17 47467864 47467963 -47804688 - Charlie17a DNA MER1_type -117 102 5 1 947 821 66 41 0 chr17 47468284 47468410 -47804241 + B1_Mus1 SINE Alu 13 149 0 1 947 1437 239 74 26 chr17 47468698 47469089 -47803562 - MTD LTR MaLR -2 417 8 1 947 1200 89 23 128 chr17 47469684 47469902 -47802749 - B2_Mm2 SINE B2 0 195 1 1 947 415 270 8 9 chr17 47472546 47472674 -47799977 + PB1D9 SINE Alu 4 130 -19 1 947 335 291 67 52 chr17 47473345 47473479 -47799172 + MIRb SINE MIR 125 260 -8 1 947 396 0 0 0 chr17 47473494 47473538 -47799113 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 947 442 221 35 0 chr17 47473556 47473642 -47799009 - B4A SINE B4 -18 274 186 1 947 247 289 144 30 chr17 47474029 47474161 -47798490 - MIRb SINE MIR -76 192 46 1 947 596 299 11 17 chr17 47474286 47474449 -47798202 - ID_B1 SINE B4 -63 229 72 1 947 868 294 11 100 chr17 47474814 47474899 -47797752 - B4 SINE B4 0 292 235 1 947 1071 211 14 9 chr17 47474899 47475114 -47797537 - B3 SINE B2 0 216 1 1 947 868 294 11 100 chr17 47475114 47475308 -47797343 - B4 SINE B4 -58 234 38 1 947 22 0 0 0 chr17 47475499 47475521 -47797130 + AT_rich Low_complexity Low_complexity 1 22 0 1 947 703 200 13 40 chr17 47475527 47475678 -47796973 + B1_Mur1 SINE Alu 2 148 -1 1 947 1009 64 29 0 chr17 47475737 47475909 -47796742 + (TAGA)n Simple_repeat Simple_repeat 4 180 0 1 947 337 211 41 0 chr17 47475926 47476006 -47796645 + ID4_ SINE ID 12 100 -52 1 947 254 50 0 24 chr17 47476301 47476342 -47796309 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 947 352 269 66 19 chr17 47476419 47476525 -47796126 - B1_Mur2 SINE Alu -37 112 2 1 947 239 276 10 121 chr17 47476441 47476540 -47796111 - MT2B LTR ERVL -361 240 153 1 947 311 209 372 0 chr17 47477121 47477207 -47795444 - RSINE1 SINE B4 -37 128 11 1 947 383 55 0 18 chr17 47477396 47477451 -47795200 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 947 611 255 39 19 chr17 47477495 47477683 -47794968 - ID_B1 SINE B4 -71 221 27 1 947 545 182 0 0 chr17 47477866 47477954 -47794697 + RSINE1 SINE B4 2 89 -76 1 947 507 230 0 0 chr17 47478511 47478598 -47794053 - RLTR18B LTR ERVK 0 512 426 1 947 2737 32 82 0 chr17 47478622 47478964 -47793687 - MTA_Mm LTR MaLR -26 370 1 1 947 1798 193 64 0 chr17 47478988 47479330 -47793321 - RLTR18B LTR ERVK -148 364 1 1 947 498 267 53 8 chr17 47479554 47479686 -47792965 + ID_B1 SINE B4 87 224 0 1 947 21 0 0 0 chr17 47479697 47479718 -47792933 + AT_rich Low_complexity Low_complexity 1 21 0 1 947 309 248 186 10 chr17 47479730 47479832 -47792819 + B3 SINE B2 15 134 -82 1 947 745 115 205 0 chr17 47479874 47479996 -47792655 + B1_Mus1 SINE Alu 1 147 -1 1 947 215 167 0 59 chr17 47479997 47480048 -47792603 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 1 947 889 226 19 51 chr17 47480156 47480371 -47792280 + B3 SINE B2 2 209 -7 1 947 23 0 0 0 chr17 47480490 47480513 -47792138 + AT_rich Low_complexity Low_complexity 1 23 0 1 947 650 294 83 25 chr17 47480981 47481257 -47791394 + B4A SINE B4 1 292 0 1 947 240 203 65 48 chr17 47481367 47481429 -47791222 + L2b LINE L2 3312 3374 -1 1 947 665 233 8 8 chr17 47481930 47482060 -47790591 + RSINE1 SINE B4 2 131 -34 1 947 243 0 0 0 chr17 47482080 47482107 -47790544 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 947 670 276 29 52 chr17 47482281 47482491 -47790160 - B4 SINE B4 -87 205 1 1 947 741 221 102 32 chr17 47482824 47482970 -47789681 + B3 SINE B2 2 164 -52 1 947 417 81 0 0 chr17 47482970 47483032 -47789619 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 947 741 221 102 32 chr17 47483032 47483072 -47789579 + B3 SINE B2 165 201 -15 1 947 228 302 0 0 chr17 47483074 47483127 -47789524 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 947 268 331 46 137 chr17 47483921 47483944 -47788707 + B4 SINE B4 67 173 -119 1 947 526 293 8 5 chr17 47483944 47484087 -47788564 + B1F SINE Alu 1 140 -10 1 947 394 224 26 0 chr17 47484100 47484176 -47788475 + PB1D10 SINE Alu 40 117 0 1 947 431 287 77 8 chr17 47484193 47484323 -47788328 + ID_B1 SINE B4 81 219 -5 1 947 890 217 39 19 chr17 47484326 47484533 -47788118 + B3 SINE B2 6 216 0 1 947 729 290 108 0 chr17 47484614 47484800 -47787851 - B3 SINE B2 -5 211 6 1 947 596 288 17 11 chr17 47484868 47485047 -47787604 - B3A SINE B2 -16 182 3 1 947 803 254 54 10 chr17 47485048 47485251 -47787400 - B3 SINE B2 -4 212 1 1 947 344 231 199 35 chr17 47485251 47485448 -47787203 - B4A SINE B4 -62 230 1 1 947 202 234 0 0 chr17 47485604 47485651 -47787000 + GA-rich Low_complexity Low_complexity 1 47 0 1 947 444 267 0 9 chr17 47486004 47486110 -47786541 + PB1D10 SINE Alu 1 105 -12 1 947 1676 165 108 94 chr17 47486545 47486960 -47785691 - RMER16 LTR ERVK 0 533 113 1 947 10406 96 14 23 chr17 47486998 47488587 -47784064 - RMER16-int LTR ERVK 0 5406 3832 1 947 575 186 53 0 chr17 47488857 47488970 -47783681 + PB1D9 SINE Alu 2 120 0 1 947 195 42 0 0 chr17 47489001 47489025 -47783626 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1 947 869 109 62 55 chr17 47489039 47489185 -47783466 + B1_Mur4 SINE Alu 3 149 -1 1 947 354 301 233 0 chr17 47489735 47489911 -47782740 + MER20 DNA MER1_type 1 217 -2 1 947 330 252 65 9 chr17 47489937 47490045 -47782606 + PB1D7 SINE Alu 1 114 -6 1 947 303 311 48 19 chr17 47490066 47490171 -47782480 + PB1D7 SINE Alu 1 108 -12 1 947 319 291 13 0 chr17 47490193 47490272 -47782379 + ID2 SINE ID 2 81 -2 1 947 303 346 6 38 chr17 47491040 47491199 -47781452 - MER117 DNA MER1_type -43 154 1 1 947 253 349 64 45 chr17 47491286 47491442 -47781209 - MIR SINE MIR -53 209 51 1 947 316 71 0 0 chr17 47491447 47491489 -47781162 + PB1D9 SINE Alu 2 43 -77 1 947 192 111 0 0 chr17 47491493 47491529 -47781122 + (A)n Simple_repeat Simple_repeat 1 36 0 1 947 4567 105 45 14 chr17 47491881 47492614 -47780037 - RMER6A LTR ERVK 0 756 1 1 947 2460 114 125 31 chr17 47492620 47493044 -47779607 - RMER4A LTR ERVK 0 466 3 1 947 827 239 96 0 chr17 47493044 47493232 -47779419 + B3 SINE B2 10 215 -1 1 947 21 0 0 0 chr17 47493258 47493279 -47779372 + AT_rich Low_complexity Low_complexity 1 21 0 1 947 382 277 11 0 chr17 47493696 47493790 -47778861 + PB1D10 SINE Alu 14 108 -9 1 947 630 234 99 120 chr17 47493840 47494304 -47778347 - RLTR11B LTR ERVK -61 467 1 1 947 303 28 0 0 chr17 47494306 47494342 -47778309 + (TGGA)n Simple_repeat Simple_repeat 1 36 0 1 947 459 0 0 0 chr17 47494342 47494392 -47778259 + (GAATG)n Simple_repeat Simple_repeat 3 53 0 1 947 287 211 125 14 chr17 47494392 47494464 -47778187 + ID_B1 SINE B4 132 211 -13 1 947 379 219 24 95 chr17 47494711 47494837 -47777814 - RSINE1 SINE B4 -5 160 44 1 947 1371 84 11 0 chr17 47494847 47495038 -47777613 - B2_Mm1a SINE B2 0 193 1 1 947 405 0 0 0 chr17 47496531 47496576 -47776075 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 947 678 85 0 0 chr17 47496693 47496787 -47775864 + (TCTCCC)n Simple_repeat Simple_repeat 1 94 0 1 947 186 133 0 0 chr17 47498669 47498699 -47773952 + (A)n Simple_repeat Simple_repeat 1 30 0 1 947 380 71 18 0 chr17 47498933 47498989 -47773662 + (ATG)n Simple_repeat Simple_repeat 2 58 0 1 947 342 0 0 0 chr17 47499052 47499090 -47773561 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 947 521 198 57 0 chr17 47499484 47499590 -47773061 + B1_Mur1 SINE Alu 21 132 -17 1 947 201 139 0 0 chr17 47499957 47500000 -47772651 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 1 947 1137 142 21 0 chr17 47500421 47500611 -47772040 + B2_Mm2 SINE B2 2 195 0 1 947 868 155 4 8 chr17 47500611 47500860 -47771791 + GA-rich Low_complexity Low_complexity 1 247 0 2 947 795 75 0 0 chr17 47500876 47500983 -47771668 + B1_Mus2 SINE Alu 41 147 0 3 947 337 312 112 0 chr17 47501166 47501291 -47771360 + B1_Mus2 SINE Alu 1 139 -8 4 947 312 287 157 29 chr17 47501296 47501436 -47771215 + RSINE1 SINE B4 8 165 0 5 947 294 95 0 0 chr17 47501436 47501478 -47771173 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 947 562 178 50 0 chr17 47501544 47501645 -47771006 + B1_Mur3 SINE Alu 1 106 -43 7 947 359 229 11 57 chr17 47502221 47502309 -47770342 + RSINE1 SINE B4 53 136 -29 8 947 279 133 0 0 chr17 47502601 47502643 -47770008 + MTC LTR MaLR 1 42 -377 9 947 3954 104 5 31 chr17 47502643 47503259 -47769392 + MT2B LTR ERVL 2 601 0 1 947 2064 139 57 36 chr17 47503259 47503639 -47769012 + MTC LTR MaLR 33 420 -1 9 947 2464 148 0 15 chr17 47504668 47505080 -47767571 + MTB_Mm LTR MaLR 2 407 0 1 947 206 156 22 0 chr17 47505653 47505698 -47766953 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 1 947 29 0 0 0 chr17 47505699 47505728 -47766923 + AT_rich Low_complexity Low_complexity 1 29 0 1 947 355 232 28 56 chr17 47506370 47506510 -47766141 + PB1D9 SINE Alu 16 143 -7 1 947 302 256 84 46 chr17 47506676 47506807 -47765844 + ID_B1 SINE B4 2 137 -87 1 947 446 179 33 74 chr17 47506793 47506914 -47765737 + MT2B LTR ERVL 163 278 -323 1 947 1039 30 0 0 chr17 47506807 47506940 -47765711 + B1_Mus2 SINE Alu 14 146 -1 1 947 304 333 0 0 chr17 47506960 47507041 -47765610 - ID4 SINE ID 0 83 3 1 947 433 340 82 15 chr17 47507190 47507396 -47765255 - Charlie1b DNA MER1_type -302 221 2 1 947 1086 68 7 20 chr17 47507415 47507564 -47765087 + B1_Mm SINE Alu 1 147 0 2 947 228 311 56 0 chr17 47507952 47508042 -47764609 + ID_B1 SINE B4 112 206 -18 1 947 460 197 87 39 chr17 47508266 47508393 -47764258 - B1_Mur3 SINE Alu -8 141 9 2 947 217 256 93 146 chr17 47508393 47508417 -47764234 - B4 SINE B4 -74 218 76 2 947 296 320 14 2 chr17 47508770 47508885 -47763766 - B1_Mus2 SINE Alu 0 117 1 2 947 454 255 120 7 chr17 47508899 47509049 -47763602 - B3 SINE B2 0 216 50 2 947 936 117 7 27 chr17 47509098 47509247 -47763404 - B1_Mus1 SINE Alu -1 147 2 2 947 236 298 48 105 chr17 47509605 47509616 -47763035 + ID SINE ID 72 76 -148 2 947 270 192 85 119 chr17 47509616 47509734 -47762917 + PB1D10 SINE Alu 2 115 -2 2 947 225 0 0 0 chr17 47510013 47510038 -47762613 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 947 481 268 71 0 chr17 47510168 47510295 -47762356 - ID_B1 SINE B4 -9 215 80 2 947 264 274 0 56 chr17 47510352 47510441 -47762210 + B4A SINE B4 144 227 -65 3 947 340 286 0 0 chr17 47510443 47510527 -47762124 + RSINE1 SINE B4 4 87 -78 3 947 261 291 163 0 chr17 47510644 47510730 -47761921 + RSINE1 SINE B4 52 151 -14 3 947 225 0 0 0 chr17 47510741 47510766 -47761885 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 947 532 164 87 0 chr17 47513303 47513407 -47759244 + ID_B1 SINE B4 112 224 0 3 947 667 219 12 31 chr17 47513530 47513690 -47758961 + B3 SINE B2 47 203 -13 3 947 190 315 254 0 chr17 47513837 47513967 -47758684 + MIR SINE MIR 30 192 -70 3 947 785 152 6 70 chr17 47514138 47514294 -47758357 + B1_Mur4 SINE Alu 2 147 -3 3 947 437 252 201 0 chr17 47514440 47514579 -47758072 - B3 SINE B2 -48 168 2 3 947 387 192 27 0 chr17 47515564 47515637 -47757014 - B1_Mur3 SINE Alu -74 75 1 3 947 243 277 46 0 chr17 47516694 47516759 -47755892 + RSINE1 SINE B4 65 132 -33 4 947 1113 55 7 0 chr17 47517019 47517164 -47755487 + B1_Mus2 SINE Alu 2 147 0 4 947 315 260 73 0 chr17 47517177 47517273 -47755378 - PB1D7 SINE Alu -13 107 5 4 947 251 155 29 40 chr17 47517546 47517612 -47755039 + B1F SINE Alu 43 106 -11 4 947 428 231 55 9 chr17 47518054 47518163 -47754488 + PB1D7 SINE Alu 1 114 -6 4 947 319 292 146 0 chr17 47518172 47518302 -47754349 + B1_Mur2 SINE Alu 1 149 0 4 947 235 248 252 16 chr17 47518317 47518440 -47754211 + RSINE1 SINE B4 2 153 -12 4 947 731 259 32 0 chr17 47518499 47518657 -47753994 + RSINE1 SINE B4 3 165 0 4 947 231 237 33 17 chr17 47519249 47519309 -47753342 - ID4 SINE ID -9 74 14 4 947 531 0 0 0 chr17 47519312 47519371 -47753280 + (TC)n Simple_repeat Simple_repeat 1 59 0 4 947 22 0 0 0 chr17 47519472 47519494 -47753157 + AT_rich Low_complexity Low_complexity 1 22 0 5 947 301 199 0 5 chr17 47519508 47519572 -47753079 - B2_Mm2 SINE B2 -107 109 48 5 947 261 240 139 33 chr17 47519900 47520051 -47752600 - MER5A DNA MER1_type -5 184 18 5 947 255 300 24 36 chr17 47520287 47520370 -47752281 + RSINE1 SINE B4 82 163 -2 5 947 696 256 20 30 chr17 47520570 47520767 -47751884 - B3A SINE B2 -1 197 3 5 947 263 374 34 0 chr17 47520775 47520922 -47751729 - L2 LINE L2 -2789 630 479 5 947 858 200 5 43 chr17 47521082 47521270 -47751381 + B3A SINE B2 2 182 -16 5 947 30 45 0 0 chr17 47521275 47521319 -47751332 + AT_rich Low_complexity Low_complexity 1 44 0 5 947 725 221 71 11 chr17 47521327 47521486 -47751165 + B3 SINE B2 4 172 -26 5 947 324 0 0 0 chr17 47521486 47521522 -47751129 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 947 678 221 71 11 chr17 47521522 47521545 -47751106 + B3A SINE B2 173 196 -2 5 947 685 203 0 65 chr17 47521550 47521703 -47750948 + B1_Mur1 SINE Alu 1 143 -6 6 947 281 224 90 0 chr17 47521791 47521858 -47750793 - PB1D10 SINE Alu -30 87 15 6 947 212 188 15 45 chr17 47522712 47522779 -47749872 + CT-rich Low_complexity Low_complexity 3 67 0 6 947 516 16 0 0 chr17 47523111 47523172 -47749479 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 947 506 273 13 45 chr17 47523177 47523334 -47749317 - B3A SINE B2 -41 157 6 6 947 180 0 0 0 chr17 47523427 47523447 -47749204 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 947 423 0 0 0 chr17 47523447 47523493 -47749158 + (GA)n Simple_repeat Simple_repeat 1 47 0 6 947 277 290 53 11 chr17 47523524 47523618 -47749033 - B4 SINE B4 -10 282 185 6 947 390 285 15 23 chr17 47523695 47523828 -47748823 - B3A SINE B2 -9 189 58 6 947 331 307 10 0 chr17 47523869 47523970 -47748681 - B4A SINE B4 -189 103 2 6 947 771 194 178 0 chr17 47524126 47524306 -47748345 + B3 SINE B2 1 212 -4 6 947 731 94 0 0 chr17 47524477 47524583 -47748068 - B2_Mm2 SINE B2 -88 107 2 7 947 746 196 14 0 chr17 47524618 47524756 -47747895 - B1_Mur1 SINE Alu -6 143 4 7 947 686 177 229 0 chr17 47525202 47525377 -47747274 - B3 SINE B2 0 216 2 7 947 239 0 0 31 chr17 47525507 47525539 -47747112 + (TTTTTG)n Simple_repeat Simple_repeat 3 33 0 7 947 545 158 221 0 chr17 47525548 47525675 -47746976 + B3 SINE B2 1 155 -61 7 947 872 141 7 20 chr17 47526360 47526512 -47746139 + B1_Mur4 SINE Alu 1 150 0 7 947 1200 27 7 0 chr17 47526514 47526660 -47745991 + B1_Mus2 SINE Alu 1 147 0 7 947 745 264 30 5 chr17 47527426 47527624 -47745027 - B3 SINE B2 -8 208 6 7 947 521 200 118 16 chr17 47527680 47527807 -47744844 - MTD LTR MaLR -261 158 19 7 947 266 88 29 29 chr17 47528313 47528383 -47744268 + (TTTG)n Simple_repeat Simple_repeat 3 72 0 7 947 990 188 50 0 chr17 47528383 47528585 -47744066 - B3 SINE B2 -4 212 1 8 947 236 281 18 0 chr17 47528614 47528671 -47743980 + RSINE1 SINE B4 4 61 -104 8 947 476 208 124 8 chr17 47529941 47530062 -47742589 - B1F SINE Alu -1 148 14 8 947 352 253 69 0 chr17 47530113 47530200 -47742451 - PB1D7 SINE Alu -10 110 18 8 947 900 163 90 20 chr17 47530274 47530474 -47742177 - B3 SINE B2 0 216 3 8 947 1233 92 12 0 chr17 47530550 47530723 -47741928 + B2_Mm1t SINE B2 3 177 -16 8 947 1137 51 0 0 chr17 47530724 47530862 -47741789 + B1_Mus1 SINE Alu 2 139 -9 8 947 203 0 0 36 chr17 47530862 47530890 -47741761 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 947 250 128 0 41 chr17 47530948 47530997 -47741654 + B2_Mm2 SINE B2 47 93 -102 8 947 24 0 0 0 chr17 47531012 47531036 -47741615 + AT_rich Low_complexity Low_complexity 1 24 0 8 947 227 163 23 23 chr17 47531146 47531190 -47741461 + L2c LINE L2 3328 3371 -16 9 947 222 189 0 0 chr17 47531160 47531197 -47741454 + MIRb SINE MIR 227 263 -5 9 947 22 0 0 0 chr17 47531265 47531287 -47741364 + GC_rich Low_complexity Low_complexity 1 22 0 9 947 225 0 0 0 chr17 47532363 47532388 -47740263 + (A)n Simple_repeat Simple_repeat 1 25 0 9 947 250 132 0 60 chr17 47532396 47532470 -47740181 + PB1D9 SINE Alu 1 66 -82 9 947 1056 45 0 0 chr17 47533487 47533619 -47739032 - B1_Mus1 SINE Alu -16 132 1 9 947 766 191 0 20 chr17 47533623 47533773 -47738878 - B1_Mm SINE Alu 0 147 1 9 947 548 242 82 27 chr17 47533794 47533977 -47738674 - B3A SINE B2 -1 197 5 9 947 822 73 0 0 chr17 47534346 47534456 -47738195 + B2_Mm2 SINE B2 2 111 -84 9 947 423 0 0 0 chr17 47534868 47534915 -47737736 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 947 468 286 0 0 chr17 47534926 47535024 -47737627 - B1F1 SINE Alu -51 98 1 1 947 254 261 21 93 chr17 47534938 47535035 -47737616 - MT2B2 LTR ERVL -343 241 152 1 947 401 307 47 8 chr17 47535104 47535232 -47737419 - L2a LINE L2 0 3426 3294 1 947 44 20 0 0 chr17 47535297 47535348 -47737303 + AT_rich Low_complexity Low_complexity 1 51 0 1 947 337 214 107 0 chr17 47535403 47535487 -47737164 - B2_Mm2 SINE B2 -101 94 2 1 947 283 320 6 0 chr17 47535487 47535515 -47737136 + ORR1E-int LTR MaLR 602 629 -880 1 947 823 177 0 39 chr17 47535515 47535668 -47736983 + B1_Mus1 SINE Alu 1 147 -1 1 947 283 320 6 0 chr17 47535668 47535685 -47736966 + ORR1E-int LTR MaLR 630 647 -862 1 947 833 60 0 0 chr17 47535685 47535801 -47736850 + B1_Mus2 SINE Alu 2 117 -30 1 947 578 104 10 0 chr17 47536519 47536615 -47736036 + (TC)n Simple_repeat Simple_repeat 2 98 0 1 947 315 299 0 0 chr17 47536945 47537032 -47735619 + B1F1 SINE Alu 21 107 -42 1 947 458 31 31 0 chr17 47538277 47538341 -47734310 - ORR1A1 LTR MaLR 0 346 281 1 947 1097 75 7 0 chr17 47538385 47538531 -47734120 - B1_Mus2 SINE Alu 0 147 1 1 947 3222 55 33 0 chr17 47538532 47538986 -47733665 - ORR1A1-int LTR MaLR -1323 469 1 1 947 3711 51 6 0 chr17 47538986 47539458 -47733193 - MT2C_Mm LTR ERVL 0 475 1 1 947 630 296 40 24 chr17 47539533 47539680 -47732971 + RMER15-int LTR ERVL 4140 4287 -712 1 947 4033 29 12 2 chr17 47539680 47540168 -47732483 - MT2_Mm LTR ERVL 0 493 1 1 947 630 296 40 24 chr17 47540168 47540269 -47732382 + RMER15-int LTR ERVL 4288 4392 -607 1 947 679 227 86 0 chr17 47540370 47540533 -47732118 + ORR1E LTR MaLR 1 177 -182 1 947 929 95 45 24 chr17 47541253 47541794 -47730857 + (TG)n Simple_repeat Simple_repeat 1 552 0 1 947 1914 93 53 59 chr17 47542622 47542943 -47729708 + ORR1A2 LTR MaLR 1 319 -8 1 947 9750 126 100 18 chr17 47542947 47544761 -47727890 + ORR1A2-int LTR MaLR 1 1963 0 1 947 1573 163 33 33 chr17 47544761 47545065 -47727586 + ORR1A2 LTR MaLR 1 304 -42 1 947 780 215 45 11 chr17 47545092 47545271 -47727380 - B3 SINE B2 -31 185 1 1 947 505 222 31 31 chr17 47545967 47546097 -47726554 + B1F SINE Alu 12 141 -8 1 947 180 182 0 0 chr17 47546353 47546397 -47726254 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 947 689 172 8 38 chr17 47546418 47546551 -47726100 - B1_Mur1 SINE Alu -11 138 10 1 947 22 0 0 0 chr17 47547445 47547467 -47725184 + GC_rich Low_complexity Low_complexity 1 22 0 1 947 31 26 0 0 chr17 47547559 47547597 -47725054 + GC_rich Low_complexity Low_complexity 1 38 0 1 947 249 180 0 0 chr17 47547780 47547830 -47724821 + T-rich Low_complexity Low_complexity 1 50 0 1 947 800 164 43 7 chr17 47548867 47549008 -47723643 + B1_Mur4 SINE Alu 1 146 -4 1 947 1206 27 0 20 chr17 47549015 47549166 -47723485 + B1_Mus1 SINE Alu 1 148 0 1 947 513 267 20 14 chr17 47549284 47549432 -47723219 + B1F SINE Alu 1 149 0 1 947 950 121 0 0 chr17 47549481 47549630 -47723021 + B2_Mm2 SINE B2 1 149 -46 1 947 375 23 0 0 chr17 47549630 47549674 -47722977 + (TAAA)n Simple_repeat Simple_repeat 4 47 0 1 947 830 157 0 0 chr17 47549687 47549821 -47722830 + B1_Mm SINE Alu 1 134 -13 1 947 216 267 0 0 chr17 47549866 47549911 -47722740 + ID SINE ID 6 50 -174 1 947 338 268 103 0 chr17 47549946 47550043 -47722608 + ID_B1 SINE B4 118 224 0 1 947 537 92 81 0 chr17 47552089 47552176 -47720475 - B2_Mm2 SINE B2 -7 188 95 1 947 589 82 113 0 chr17 47552304 47552401 -47720250 - B2_Mm1t SINE B2 -83 110 3 1 947 383 246 34 34 chr17 47553187 47553305 -47719346 + MER87 LTR ERV1 400 517 -24 1 947 686 208 85 53 chr17 47553400 47553551 -47719100 + B3A SINE B2 5 167 -31 1 947 311 0 0 25 chr17 47553551 47553591 -47719060 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 947 686 208 85 53 chr17 47553591 47553627 -47719024 + B3A SINE B2 168 198 0 1 947 388 306 36 0 chr17 47553662 47553773 -47718878 + ID_B1 SINE B4 110 224 0 1 947 279 233 0 0 chr17 47553966 47554026 -47718625 + ORR1D1 LTR MaLR 6 65 -309 1 947 293 345 107 30 chr17 47554033 47554296 -47718355 + RLTR12B LTR ERVK 18 300 -228 1 947 665 138 29 44 chr17 47554459 47554595 -47718056 + ORR1D1 LTR MaLR 56 189 -185 1 947 832 137 14 0 chr17 47554635 47554774 -47717877 - B1_Mus1 SINE Alu -2 146 6 1 947 848 208 17 23 chr17 47554769 47554946 -47717705 + ORR1D1 LTR MaLR 182 357 -17 1 947 198 271 68 68 chr17 47554981 47555084 -47717567 - MIRc SINE MIR -98 170 68 1 947 189 0 0 0 chr17 47555746 47555767 -47716884 + (CTG)n Simple_repeat Simple_repeat 3 23 0 1 947 232 226 15 46 chr17 47555824 47555889 -47716762 + GA-rich Low_complexity Low_complexity 2 64 0 1 947 678 258 5 33 chr17 47555901 47556085 -47716566 + B3A SINE B2 4 182 -16 1 947 505 148 91 18 chr17 47556120 47556230 -47716421 + B2_Mm2 SINE B2 1 118 -77 1 947 409 301 167 54 chr17 47556750 47556989 -47715662 + B4A SINE B4 27 292 0 1 947 247 256 0 71 chr17 47557207 47557291 -47715360 - ID2 SINE ID -4 79 2 1 947 800 253 19 0 chr17 47557762 47557920 -47714731 + RSINE1 SINE B4 3 163 -2 1 947 362 214 11 22 chr17 47557948 47558130 -47714521 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 947 475 230 6 17 chr17 47558165 47558323 -47714328 + (CA)n Simple_repeat Simple_repeat 2 158 0 1 947 555 78 0 0 chr17 47558323 47558400 -47714251 + (TAGA)n Simple_repeat Simple_repeat 4 80 0 1 947 475 230 6 17 chr17 47558400 47558422 -47714229 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 947 812 179 121 45 chr17 47559091 47559290 -47713361 - B3 SINE B2 0 216 3 1 947 245 245 30 114 chr17 47559613 47559779 -47712872 + (TGGA)n Simple_repeat Simple_repeat 1 152 0 1 947 227 167 16 48 chr17 47559895 47559958 -47712693 + (TTTG)n Simple_repeat Simple_repeat 3 63 0 1 947 459 186 0 47 chr17 47559959 47560066 -47712585 - B1_Mur3 SINE Alu -1 148 47 1 947 297 169 0 0 chr17 47560202 47560261 -47712390 + (TGGA)n Simple_repeat Simple_repeat 1 59 0 1 947 616 80 10 10 chr17 47560494 47560595 -47712056 + (TGGA)n Simple_repeat Simple_repeat 3 103 0 1 947 231 344 15 62 chr17 47560635 47560765 -47711886 + MIR SINE MIR 21 144 -118 1 947 1138 210 0 0 chr17 47560931 47561145 -47711506 + B3 SINE B2 3 216 0 1 947 475 267 92 49 chr17 47561947 47562132 -47710519 + ID_B1 SINE B4 16 208 -16 1 947 680 152 14 0 chr17 47562136 47562281 -47710370 + (CATA)n Simple_repeat Simple_repeat 2 148 0 1 947 223 314 166 7 chr17 47562287 47562423 -47710228 + MIR SINE MIR 27 187 -81 1 947 187 291 37 37 chr17 47562737 47562819 -47709832 + MIRb SINE MIR 51 132 -136 1 947 297 290 61 55 chr17 47562951 47563115 -47709536 - L1ME5 LINE L1 -192 6002 5838 1 947 277 239 30 0 chr17 47563178 47563245 -47709406 - PB1 SINE Alu -38 89 21 1 947 580 257 0 29 chr17 47563302 47563442 -47709209 - ID_B1 SINE B4 -5 219 84 1 947 1061 134 99 0 chr17 47563448 47563475 -47709176 - B2_Mm2 SINE B2 -6 189 160 1 947 432 0 0 0 chr17 47563475 47563523 -47709128 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 947 1061 134 99 0 chr17 47563523 47563667 -47708984 - B2_Mm2 SINE B2 -36 159 2 1 947 475 273 14 34 chr17 47563676 47563824 -47708827 - ID_B1 SINE B4 -2 222 78 1 947 577 287 34 23 chr17 47564347 47564522 -47708129 + B3A SINE B2 14 190 -8 1 947 540 220 50 50 chr17 47564522 47564653 -47707998 + B1_Mur2 SINE Alu 10 140 -9 1 947 297 0 0 0 chr17 47564653 47564686 -47707965 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 947 779 229 6 33 chr17 47565321 47565502 -47707149 - ID_B1 SINE B4 -48 176 1 1 947 744 199 14 0 chr17 47566401 47566542 -47706109 + RSINE1 SINE B4 4 146 -19 1 947 498 218 298 18 chr17 47566603 47566771 -47705880 + B3 SINE B2 2 216 0 1 947 1303 57 6 6 chr17 47566820 47566998 -47705653 + (TTC)n Simple_repeat Simple_repeat 1 178 0 1 947 786 134 0 0 chr17 47566999 47567126 -47705525 + (TCC)n Simple_repeat Simple_repeat 2 128 0 1 947 325 118 0 0 chr17 47567130 47567181 -47705470 - B3 SINE B2 -163 53 3 1 947 225 0 0 0 chr17 47567234 47567259 -47705392 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 1 947 573 242 14 43 chr17 47567260 47567398 -47705253 - ID_B1 SINE B4 -13 211 78 1 947 398 172 143 86 chr17 47567409 47567549 -47705102 - B1F1 SINE Alu -1 148 1 1 947 397 247 10 30 chr17 47567781 47567881 -47704770 - PB1 SINE Alu -2 125 28 1 947 333 0 0 0 chr17 47568078 47568115 -47704536 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 947 951 282 43 36 chr17 47568149 47568203 -47704448 - B4A SINE B4 -14 278 225 1 947 378 0 0 0 chr17 47568203 47568245 -47704406 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 1 947 951 282 43 36 chr17 47568245 47568466 -47704185 - B4A SINE B4 -68 224 3 1 947 395 216 225 31 chr17 47569036 47569165 -47703486 + RSINE1 SINE B4 12 165 0 1 947 317 244 114 104 chr17 47569210 47569392 -47703259 + B3A SINE B2 6 198 0 1 947 888 204 146 5 chr17 47569887 47570079 -47702572 - ID_B1 SINE B4 -5 219 1 1 947 265 270 12 108 chr17 47570112 47570195 -47702456 + ID4_ SINE ID 2 76 -7 1 947 23 33 0 0 chr17 47570201 47570231 -47702420 + AT_rich Low_complexity Low_complexity 1 30 0 1 947 1098 146 32 0 chr17 47570650 47570835 -47701816 - B2_Mm2 SINE B2 -3 192 2 1 947 503 194 19 19 chr17 47570866 47570971 -47701680 + B1_Mus2 SINE Alu 1 105 -42 1 947 453 244 75 15 chr17 47571038 47571171 -47701480 - B1F SINE Alu -8 141 1 1 947 379 213 412 20 chr17 47571201 47571354 -47701297 + B3 SINE B2 1 213 -3 1 947 575 215 56 0 chr17 47571372 47571479 -47701172 + PB1D9 SINE Alu 2 114 -6 1 947 1108 95 0 20 chr17 47571488 47571638 -47701013 + B1_Mus2 SINE Alu 1 147 0 1 947 423 0 0 0 chr17 47571648 47571695 -47700956 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 947 456 203 351 7 chr17 47571697 47571851 -47700800 - B3 SINE B2 -9 207 1 1 947 303 354 53 71 chr17 47571851 47571882 -47700769 + B4 SINE B4 54 81 -211 1 947 711 216 11 0 chr17 47571882 47572024 -47700627 + B1_Mur1 SINE Alu 1 146 -3 2 947 233 347 32 0 chr17 47572072 47572167 -47700484 + Lx8 LINE L1 7045 7142 -331 2 947 299 255 151 20 chr17 47572169 47572321 -47700330 + Lx8 LINE L1 7300 7471 -2 2 947 534 221 64 24 chr17 47572349 47572474 -47700177 + B1_Mur2 SINE Alu 4 133 -16 2 947 299 113 16 0 chr17 47572475 47572537 -47700114 + (CATA)n Simple_repeat Simple_repeat 1 63 0 2 947 284 199 40 40 chr17 47572569 47572721 -47699930 + (TATAA)n Simple_repeat Simple_repeat 3 154 0 2 947 1129 68 0 33 chr17 47572779 47572931 -47699720 + B1_Mm SINE Alu 1 147 0 2 947 222 37 0 0 chr17 47572935 47572962 -47699689 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 947 294 50 0 0 chr17 47572978 47573018 -47699633 + B1_Mur4 SINE Alu 1 40 -110 2 947 210 111 0 0 chr17 47573027 47573038 -47699613 + (A)n Simple_repeat Simple_repeat 1 11 0 2 947 369 0 0 0 chr17 47573038 47573079 -47699572 + (CAA)n Simple_repeat Simple_repeat 2 42 0 2 947 210 111 0 0 chr17 47573079 47573103 -47699548 + (A)n Simple_repeat Simple_repeat 1 24 0 2 947 225 0 0 0 chr17 47573337 47573362 -47699289 + (A)n Simple_repeat Simple_repeat 1 25 0 2 947 24 32 0 0 chr17 47573514 47573545 -47699106 + GC_rich Low_complexity Low_complexity 1 31 0 2 947 274 340 131 6 chr17 47575178 47575338 -47697313 - MIR SINE MIR -26 236 57 2 947 846 172 133 11 chr17 47576015 47576203 -47696448 - URR1A DNA MER1_type -14 212 2 2 947 475 191 11 0 chr17 47576374 47576468 -47696183 - PB1 SINE Alu -21 106 12 2 947 1166 55 7 0 chr17 47576871 47577016 -47695635 - B1_Mus2 SINE Alu -1 146 1 2 947 182 107 71 0 chr17 47577857 47577913 -47694738 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 947 337 124 80 6 chr17 47577940 47578102 -47694549 + (CA)n Simple_repeat Simple_repeat 1 174 0 2 947 314 267 37 104 chr17 47578414 47578548 -47694103 - MER5A1 DNA MER1_type -11 155 31 2 948 241 253 48 48 chr17 47579199 47579282 -47693369 - MIRb SINE MIR -19 189 107 2 948 294 276 135 45 chr17 47579554 47579687 -47692964 + RSINE1 SINE B4 4 148 -17 2 948 420 20 0 0 chr17 47579703 47579752 -47692899 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 948 192 163 0 0 chr17 47580643 47580686 -47691965 + (ATGGTG)n Simple_repeat Simple_repeat 5 47 0 2 948 471 257 101 0 chr17 47580750 47580898 -47691753 - RSINE1 SINE B4 0 165 3 2 948 266 239 27 27 chr17 47581480 47581553 -47691098 + B1_Mus2 SINE Alu 6 78 -69 2 948 189 0 0 0 chr17 47581601 47581622 -47691029 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 948 312 256 0 25 chr17 47581648 47581728 -47690923 - RSINE1 SINE B4 -85 80 3 2 948 504 261 14 55 chr17 47581732 47581878 -47690773 - B1F SINE Alu 0 149 10 2 948 567 191 82 0 chr17 47582378 47582488 -47690163 - PB1D9 SINE Alu -1 119 1 2 948 221 280 137 21 chr17 47583992 47584087 -47688564 - L2c LINE L2 -222 3165 3057 2 948 327 216 54 43 chr17 47584129 47584221 -47688430 - PB1D10 SINE Alu -1 116 24 2 948 465 19 0 0 chr17 47584242 47584296 -47688355 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 2 948 199 41 102 0 chr17 47584299 47584348 -47688303 + (TA)n Simple_repeat Simple_repeat 1 54 0 2 948 755 245 138 5 chr17 47584348 47584537 -47688114 - B3 SINE B2 -2 214 1 2 948 686 248 14 7 chr17 47584616 47584758 -47687893 + RSINE1 SINE B4 6 148 -17 2 948 369 272 140 6 chr17 47584902 47585025 -47687626 + ID_B1 SINE B4 82 217 -7 2 948 233 88 0 0 chr17 47585155 47585189 -47687462 + ID_B1 SINE B4 183 216 -8 2 948 493 277 66 20 chr17 47585253 47585404 -47687247 + ID_B1 SINE B4 1 158 -66 2 948 190 0 67 0 chr17 47585438 47585468 -47687183 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2 948 532 342 0 6 chr17 47587622 47587784 -47684867 + RSINE1 SINE B4 3 163 -2 2 948 246 105 0 0 chr17 47587816 47587854 -47684797 + (TAA)n Simple_repeat Simple_repeat 2 39 0 2 948 558 209 43 0 chr17 47587922 47588037 -47684614 + PB1D9 SINE Alu 1 120 0 2 948 311 302 0 0 chr17 47588976 47589062 -47683589 - ID_B1 SINE B4 0 224 139 2 948 519 198 36 0 chr17 47589092 47589203 -47683448 - B1_Mur1 SINE Alu -22 127 13 2 948 248 320 13 0 chr17 47589148 47589223 -47683428 - B4A SINE B4 -139 153 78 2 948 382 226 0 41 chr17 47589268 47589365 -47683286 - RSINE1 SINE B4 -68 97 5 2 948 628 230 23 62 chr17 47589347 47589526 -47683125 - ID_B1 SINE B4 -118 174 4 2 948 648 211 167 5 chr17 47590423 47590609 -47682042 - B3 SINE B2 0 216 1 2 948 520 159 73 18 chr17 47590838 47590947 -47681704 - PB1D10 SINE Alu -2 115 1 2 948 418 271 30 18 chr17 47590951 47591079 -47681572 - PB1D7 SINE Alu 0 149 11 2 948 227 241 52 0 chr17 47591027 47591085 -47681566 - B4A SINE B4 -143 149 89 2 948 304 310 50 0 chr17 47591124 47591224 -47681427 - PB1D7 SINE Alu -3 117 13 2 948 23 0 0 0 chr17 47591262 47591285 -47681366 + AT_rich Low_complexity Low_complexity 1 23 0 2 948 564 240 93 33 chr17 47591318 47591469 -47681182 + RSINE1 SINE B4 2 161 -4 2 948 377 281 35 0 chr17 47591482 47591596 -47681055 + B1F SINE Alu 6 123 -26 2 948 456 227 0 0 chr17 47592133 47592283 -47680368 + (CA)n Simple_repeat Simple_repeat 1 150 0 2 948 267 248 52 87 chr17 47592847 47592962 -47679689 + MIR SINE MIR 69 179 -83 2 948 229 281 0 89 chr17 47593068 47593236 -47679415 + ORR1B1-int LTR MaLR 595 747 -762 2 948 440 202 0 111 chr17 47593120 47593136 -47679515 + MT2B LTR ERVL 153 155 -446 2 948 941 63 0 0 chr17 47593136 47593262 -47679389 + B1_Mus2 SINE Alu 1 126 -21 2 948 394 284 168 42 chr17 47593614 47593805 -47678846 - ID_B1 SINE B4 -1 223 9 2 948 550 315 183 0 chr17 47593820 47594061 -47678590 - B4A SINE B4 -5 287 3 2 948 235 261 92 0 chr17 47594088 47594153 -47678498 - B1F SINE Alu -78 71 1 2 948 252 278 0 53 chr17 47594097 47594173 -47678478 - ID_B1 SINE B4 -87 137 66 2 948 286 342 90 94 chr17 47594369 47594624 -47678027 - B4 SINE B4 -11 281 28 2 948 248 304 0 123 chr17 47594708 47594862 -47677789 - RMER12 LTR ERVK -466 856 722 2 948 292 274 32 164 chr17 47594955 47595049 -47677602 - MT2B LTR ERVL -249 335 259 2 948 231 36 0 0 chr17 47595049 47595077 -47677574 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 2 948 578 137 0 12 chr17 47595080 47595189 -47677462 - B1_Mur4 SINE Alu -13 107 1 2 948 186 133 0 0 chr17 47595193 47595223 -47677428 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 2 948 835 283 75 29 chr17 47595365 47595671 -47676980 - MTE2a LTR MaLR -3 376 57 2 948 491 196 30 0 chr17 47595681 47595814 -47676837 + CT-rich Low_complexity Low_complexity 2 138 0 2 948 710 76 0 28 chr17 47595820 47595928 -47676723 - B1_Mus2 SINE Alu -1 146 42 2 948 240 248 48 68 chr17 47595825 47595877 -47676774 - RLTR25B LTR ERVK -488 540 460 2 948 248 80 0 123 chr17 47595877 47595934 -47676717 - 4.5SRNA scRNA scRNA -5 89 40 2 948 240 248 48 68 chr17 47595934 47595972 -47676679 - RLTR25B LTR ERVK -488 459 397 2 948 513 68 0 0 chr17 47596259 47596333 -47676318 + (TTTA)n Simple_repeat Simple_repeat 2 75 0 2 948 407 259 101 22 chr17 47596334 47596472 -47676179 - B2_Mm1a SINE B2 -35 158 10 2 948 318 169 0 0 chr17 47596658 47596723 -47675928 + (TG)n Simple_repeat Simple_repeat 2 66 0 2 948 483 255 112 82 chr17 47596772 47597041 -47675610 - B4 SINE B4 -14 278 2 2 948 210 282 141 0 chr17 47597563 47597641 -47675010 + B1_Mus2 SINE Alu 27 115 -32 2 948 721 173 14 57 chr17 47597671 47597812 -47674839 + B1_Mus1 SINE Alu 2 136 -12 2 948 345 47 0 0 chr17 47597812 47597855 -47674796 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2 948 334 133 40 0 chr17 47597871 47597946 -47674705 + GA-rich Low_complexity Low_complexity 4 81 0 2 948 2294 153 60 15 chr17 47598212 47598711 -47673940 - RLTR26 LTR ERVK 0 642 115 2 948 822 201 167 5 chr17 47598698 47598908 -47673743 - ORR1B1 LTR MaLR -150 244 1 2 948 912 222 17 0 chr17 47599295 47599471 -47673180 + ID_B1 SINE B4 8 186 -38 2 948 387 283 15 77 chr17 47599952 47600082 -47672569 - RSINE1 SINE B4 -41 124 3 2 948 243 293 221 83 chr17 47600232 47600377 -47672274 - MER82 DNA MER2_type -1 652 488 2 948 737 237 67 21 chr17 47600406 47600600 -47672051 - ID_B1 SINE B4 -20 204 2 2 948 359 200 273 53 chr17 47600631 47600763 -47671888 + B3A SINE B2 2 162 -36 2 948 342 329 58 13 chr17 47602393 47602547 -47670104 + RSINE1 SINE B4 5 165 0 2 948 231 152 0 0 chr17 47602782 47602828 -47669823 + CT-rich Low_complexity Low_complexity 2 47 0 2 948 232 183 0 90 chr17 47602838 47602916 -47669735 + C-rich Low_complexity Low_complexity 3 73 0 2 948 243 282 0 0 chr17 47603449 47603520 -47669131 + C-rich Low_complexity Low_complexity 1 71 0 2 948 180 0 0 0 chr17 47606549 47606569 -47666082 + (TGGGGG)n Simple_repeat Simple_repeat 5 24 0 2 948 401 211 62 35 chr17 47607840 47607953 -47664698 + PB1D10 SINE Alu 1 116 -1 2 948 309 89 0 0 chr17 47608306 47608351 -47664300 + (TC)n Simple_repeat Simple_repeat 1 45 0 2 948 712 155 9 0 chr17 47608403 47608519 -47664132 + B1_Mur2 SINE Alu 1 117 -32 2 948 966 33 108 0 chr17 47608537 47608657 -47663994 - B1_Mm SINE Alu -13 134 2 2 948 25 31 0 0 chr17 47608702 47608734 -47663917 + AT_rich Low_complexity Low_complexity 1 32 0 2 948 449 252 67 8 chr17 47608735 47608855 -47663796 + RSINE1 SINE B4 5 131 -34 3 948 627 222 70 117 chr17 47609020 47609234 -47663417 - ID_B1 SINE B4 -20 204 1 3 948 454 297 11 102 chr17 47609974 47610150 -47662501 - ID_B1 SINE B4 -10 214 55 3 948 219 268 59 49 chr17 47610967 47611069 -47661582 - MIRb SINE MIR -130 138 36 3 948 249 253 25 74 chr17 47611251 47611332 -47661319 - ID2 SINE ID -4 79 3 3 948 1390 70 32 0 chr17 47611716 47611903 -47660748 + B2_Mm1a SINE B2 1 193 0 3 948 1054 115 71 24 chr17 47611916 47612062 -47660589 + B2_Mm2 SINE B2 2 158 -37 3 948 305 24 24 0 chr17 47612062 47612104 -47660547 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 3 948 1054 115 71 24 chr17 47612104 47612126 -47660525 + B2_Mm2 SINE B2 159 178 -17 3 948 458 323 99 20 chr17 47612318 47612520 -47660131 + MER20 DNA MER1_type 1 218 -1 3 948 321 185 0 0 chr17 47612526 47612580 -47660071 + RSINE1 SINE B4 2 55 -110 3 948 478 285 170 0 chr17 47612576 47612741 -47659910 - ID_B1 SINE B4 -28 196 4 3 948 654 221 19 25 chr17 47612760 47612918 -47659733 - B3 SINE B2 -6 210 54 3 948 219 344 43 43 chr17 47613562 47613723 -47658928 + L2a LINE L2 3098 3258 -168 3 948 234 0 0 0 chr17 47613729 47613755 -47658896 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 3 948 390 331 7 86 chr17 47613842 47613909 -47658742 - B1F1 SINE Alu -9 140 78 3 948 3196 34 42 13 chr17 47613909 47614294 -47658357 - MTA_Mm LTR MaLR 0 396 1 3 948 390 331 7 86 chr17 47614294 47614378 -47658273 - B1F1 SINE Alu -72 77 1 3 948 531 0 0 0 chr17 47614385 47614444 -47658207 + (TTCC)n Simple_repeat Simple_repeat 3 61 0 3 948 1218 42 0 7 chr17 47614526 47614671 -47657980 - B1_Mm SINE Alu -2 145 2 3 948 701 237 67 51 chr17 47614807 47614985 -47657666 - B3A SINE B2 -16 182 2 3 948 938 143 0 28 chr17 47615046 47615190 -47657461 + B1_Mur4 SINE Alu 1 140 -10 3 948 1026 79 5 38 chr17 47615425 47615610 -47657041 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 3 948 314 287 31 31 chr17 47615725 47615822 -47656829 + ID_B1 SINE B4 83 179 -45 3 948 246 260 90 13 chr17 47615863 47615879 -47656772 + B1F SINE Alu 66 149 0 3 948 299 258 0 0 chr17 47615879 47615941 -47656710 + ID_B1 SINE B4 163 224 0 3 948 391 270 203 22 chr17 47616066 47616248 -47656403 + B3 SINE B2 1 215 -1 3 948 769 123 38 23 chr17 47616279 47616412 -47656239 + B1_Mus2 SINE Alu 11 145 -2 3 948 204 150 25 0 chr17 47616479 47616519 -47656132 + T-rich Low_complexity Low_complexity 4 44 0 3 948 1220 35 0 0 chr17 47616521 47616665 -47655986 - B1_Mus2 SINE Alu 0 147 4 3 948 367 292 131 7 chr17 47617237 47617382 -47655269 + B3A SINE B2 1 163 -35 3 948 372 22 0 0 chr17 47617415 47617460 -47655191 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 948 471 250 0 10 chr17 47617708 47617809 -47654842 + B1F1 SINE Alu 1 100 -49 3 948 291 316 47 73 chr17 47617813 47617895 -47654756 + ID_B1 SINE B4 29 214 -10 3 948 450 229 64 0 chr17 47617895 47618004 -47654647 + B1F SINE Alu 24 139 -10 3 948 212 321 0 0 chr17 47618371 47618427 -47654224 + RSINE1 SINE B4 2 57 -108 3 948 997 134 0 0 chr17 47618427 47618576 -47654075 + B1_Mur4 SINE Alu 2 150 0 3 948 256 300 100 0 chr17 47618622 47618712 -47653939 + ID_B1 SINE B4 90 188 -36 3 948 222 214 18 18 chr17 47618847 47618904 -47653747 + CT-rich Low_complexity Low_complexity 4 60 0 3 948 977 235 19 14 chr17 47619219 47619426 -47653225 + B3 SINE B2 4 211 -5 3 948 636 256 7 41 chr17 47619427 47619611 -47653040 + B3A SINE B2 11 184 -14 3 948 536 107 10 0 chr17 47619615 47619718 -47652933 + (TC)n Simple_repeat Simple_repeat 1 104 0 3 948 601 176 0 0 chr17 47619718 47619820 -47652831 - B1_Mur2 SINE Alu -16 133 32 3 948 21 0 0 0 chr17 47619838 47619859 -47652792 + AT_rich Low_complexity Low_complexity 1 21 0 3 948 336 246 0 120 chr17 47619859 47619984 -47652667 + MT2B LTR ERVL 155 264 -337 3 948 727 182 7 35 chr17 47619875 47620017 -47652634 + B1_Mus1 SINE Alu 10 147 -1 3 948 1248 88 55 0 chr17 47620145 47620327 -47652324 + B2_Mm1t SINE B2 2 193 0 3 948 305 143 7 91 chr17 47621274 47621428 -47651223 + C-rich Low_complexity Low_complexity 3 143 0 3 948 857 55 0 38 chr17 47622452 47622585 -47650066 + (CA)n Simple_repeat Simple_repeat 2 129 0 3 948 248 351 28 62 chr17 47622792 47622971 -47649680 + L2a LINE L2 3246 3418 -8 3 948 327 225 75 0 chr17 47624527 47624607 -47648044 + B3A SINE B2 58 143 -55 3 948 233 91 0 0 chr17 47624622 47624655 -47647996 + B1_Mus1 SINE Alu 23 55 -93 3 948 228 218 83 94 chr17 47624748 47624844 -47647807 + PB1D10 SINE Alu 23 117 0 3 948 378 209 137 15 chr17 47624879 47625010 -47647641 + B3 SINE B2 67 213 -3 3 948 340 209 163 71 chr17 47625041 47625139 -47647512 - PB1D10 SINE Alu -2 115 9 3 948 284 284 35 60 chr17 47625768 47625884 -47646767 + PB1D7 SINE Alu 1 113 -7 3 948 1115 102 18 0 chr17 47628408 47628575 -47644076 + B2_Mm2 SINE B2 11 180 -15 3 948 198 0 0 0 chr17 47628576 47628598 -47644053 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 3 948 183 42 0 0 chr17 47629784 47629808 -47642843 + (CAGAA)n Simple_repeat Simple_repeat 5 28 0 3 948 290 248 91 45 chr17 47630079 47630189 -47642462 + L2a LINE L2 3025 3139 -287 3 948 203 311 56 24 chr17 47630212 47630337 -47642314 + L2a LINE L2 3245 3373 -2 3 948 206 325 113 81 chr17 47630659 47630907 -47641744 + MIRm SINE MIR 20 275 -1 3 948 204 217 22 0 chr17 47631902 47631948 -47640703 + GA-rich Low_complexity Low_complexity 1 47 0 3 948 222 259 95 95 chr17 47631963 47632121 -47640530 + RSINE1 SINE B4 8 165 0 3 948 640 178 303 0 chr17 47632369 47632521 -47640130 + B3 SINE B2 2 199 -17 3 948 1137 80 39 28 chr17 47632522 47632666 -47639985 + B2_Mm2 SINE B2 1 149 -46 3 948 1380 69 6 11 chr17 47632666 47632842 -47639809 + B2_Mm1t SINE B2 1 175 -18 3 948 1137 80 39 28 chr17 47632842 47632876 -47639775 + B2_Mm2 SINE B2 150 181 -14 3 948 1254 82 49 11 chr17 47632877 47633028 -47639623 + B2_Mm1a SINE B2 2 160 -33 3 948 207 0 0 0 chr17 47633028 47633051 -47639600 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 3 948 1254 82 49 11 chr17 47633051 47633084 -47639567 + B2_Mm1a SINE B2 161 193 0 3 948 343 143 0 35 chr17 47633124 47633182 -47639469 + B3 SINE B2 25 80 -136 3 948 449 282 0 0 chr17 47633302 47633405 -47639246 - PB1D7 SINE Alu -1 119 17 3 948 439 236 103 71 chr17 47633727 47633882 -47638769 + RSINE1 SINE B4 4 163 -2 3 948 792 165 15 0 chr17 47633893 47634026 -47638625 + B1_Mur4 SINE Alu 1 135 -15 3 948 1552 23 0 11 chr17 47634140 47634317 -47638334 - B2_Mm1a SINE B2 -18 175 1 3 948 1173 62 14 0 chr17 47634326 47634470 -47638181 - B1_Mus2 SINE Alu 0 147 2 3 948 299 268 97 9 chr17 47634557 47634670 -47637981 - B1F SINE Alu -6 143 21 3 948 258 307 42 89 chr17 47635584 47635752 -47636899 + RMER12 LTR ERVK 696 855 -467 3 948 207 0 0 0 chr17 47635752 47635775 -47636876 + (TA)n Simple_repeat Simple_repeat 1 23 0 3 948 361 245 50 81 chr17 47635791 47635863 -47636788 + L1MB1 LINE L1 5643 5711 -472 3 948 4075 123 131 9 chr17 47635863 47636537 -47636114 + RMER6A LTR ERVK 1 756 0 3 948 361 245 50 81 chr17 47636537 47636624 -47636027 + L1MB1 LINE L1 5712 5797 -386 3 948 475 228 118 0 chr17 47636629 47636756 -47635895 - ID_B1 SINE B4 -1 223 82 3 948 1652 42 0 0 chr17 47636829 47637022 -47635629 - B2_Mm1a SINE B2 0 193 1 3 948 311 222 38 11 chr17 47637044 47637182 -47635469 + L1MB1 LINE L1 5824 5964 -216 3 948 541 275 89 51 chr17 47637183 47637340 -47635311 + RSINE1 SINE B4 3 165 0 3 948 856 53 9 0 chr17 47637373 47637487 -47635164 + B2_Mm2 SINE B2 2 116 -79 3 948 832 160 0 0 chr17 47637485 47637616 -47635035 - RMER6A LTR ERVK -21 735 605 3 948 260 221 29 14 chr17 47637598 47637667 -47634984 + B2_Mm2 SINE B2 108 177 -18 3 948 216 0 0 0 chr17 47637678 47637702 -47634949 + (ATTG)n Simple_repeat Simple_repeat 2 25 0 3 948 1039 123 14 0 chr17 47637704 47637850 -47634801 + B1_Mur4 SINE Alu 2 149 -1 3 948 702 168 179 6 chr17 47638440 47638596 -47634055 - B3A SINE B2 -15 183 1 3 948 318 88 18 0 chr17 47638626 47638683 -47633968 + B1_Mur4 SINE Alu 1 58 -92 3 948 511 226 40 16 chr17 47639506 47639632 -47633019 + B1F1 SINE Alu 20 148 -1 3 948 1064 116 17 202 chr17 47639705 47639824 -47632827 + B2_Mm2 SINE B2 1 107 -88 3 948 1051 70 21 7 chr17 47639824 47639969 -47632682 + B1_Mus1 SINE Alu 2 148 0 3 948 1064 116 17 202 chr17 47639969 47639998 -47632653 + B2_Mm2 SINE B2 108 108 -87 3 948 1464 59 38 0 chr17 47639998 47640184 -47632467 + B2_Mm1t SINE B2 1 193 0 3 948 1064 116 17 202 chr17 47640184 47640272 -47632379 + B2_Mm2 SINE B2 108 194 -1 3 948 914 144 0 25 chr17 47640282 47640439 -47632212 + B2_Mm2 SINE B2 34 186 -9 3 948 318 200 85 151 chr17 47640447 47640485 -47632166 + B3A SINE B2 1 39 -159 3 948 1327 84 15 59 chr17 47640485 47640688 -47631963 + B2_Mm2 SINE B2 2 195 0 3 948 318 200 85 151 chr17 47640688 47640755 -47631896 + B3A SINE B2 40 99 -99 3 948 229 243 157 0 chr17 47640748 47640818 -47631833 - B3 SINE B2 -129 87 7 3 948 1395 165 149 94 chr17 47640830 47640964 -47631687 + ORR1C2 LTR MaLR 3 171 -213 3 948 192 40 0 0 chr17 47640964 47640989 -47631662 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 3 948 1395 165 149 94 chr17 47640989 47641216 -47631435 + ORR1C2 LTR MaLR 172 384 0 3 948 247 336 36 36 chr17 47641227 47641338 -47631313 - ID_B1 SINE B4 -80 144 34 3 948 277 255 56 56 chr17 47641569 47641677 -47630974 + MIR SINE MIR 38 145 -117 3 948 256 200 46 0 chr17 47643556 47643621 -47629030 - MIR3 SINE MIR -43 165 98 3 948 520 257 17 26 chr17 47643652 47643768 -47628883 + B3A SINE B2 1 115 -83 3 948 233 272 196 0 chr17 47643922 47644014 -47628637 - B1F SINE Alu -29 120 11 4 948 1109 43 0 0 chr17 47644054 47644195 -47628456 + B2_Mm1a SINE B2 1 141 -52 4 948 348 191 10 114 chr17 47644515 47644630 -47628021 + PB1D9 SINE Alu 14 119 -1 4 948 976 219 35 5 chr17 47644636 47644838 -47627813 + B3 SINE B2 2 209 -7 4 948 424 217 84 9 chr17 47645550 47645657 -47626994 + B3 SINE B2 27 141 -75 4 948 243 88 0 0 chr17 47645657 47645691 -47626960 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 4 948 1298 106 22 0 chr17 47645702 47645882 -47626769 - B2_Mm2 SINE B2 -10 185 2 4 948 1223 54 0 0 chr17 47645902 47646050 -47626601 - B1_Mus1 SINE Alu 0 148 1 4 948 298 256 0 32 chr17 47646602 47646629 -47626022 + B3 SINE B2 127 153 -63 4 948 1263 100 0 0 chr17 47646629 47646809 -47625842 + (CA)n Simple_repeat Simple_repeat 1 185 -64 4 948 1263 100 0 0 chr17 47646817 47646878 -47625773 + (CA)n Simple_repeat Simple_repeat 186 249 0 4 948 298 256 0 32 chr17 47646878 47646934 -47625717 + B3 SINE B2 162 215 -1 4 948 325 23 0 0 chr17 47647020 47647063 -47625588 - B1_Mus1 SINE Alu -104 44 2 4 948 1479 78 5 0 chr17 47647099 47647290 -47625361 + B2_Mm1a SINE B2 2 193 0 4 948 1252 54 0 0 chr17 47647291 47647438 -47625213 + B1_Mus2 SINE Alu 1 147 0 4 948 372 314 34 0 chr17 47647503 47647621 -47625030 + B1F1 SINE Alu 5 126 -23 4 948 258 305 10 0 chr17 47647768 47647853 -47624798 - B3A SINE B2 -126 90 1 4 948 243 0 0 0 chr17 47647904 47647931 -47624720 + (TTA)n Simple_repeat Simple_repeat 2 28 0 4 948 295 268 24 24 chr17 47647981 47648065 -47624586 - B1F SINE Alu -61 88 5 4 948 689 221 7 0 chr17 47648856 47648996 -47623655 + B1_Mur1 SINE Alu 2 142 -7 4 948 225 290 29 0 chr17 47649172 47649241 -47623410 - MIR SINE MIR -126 136 66 4 948 642 82 0 0 chr17 47649481 47649579 -47623072 + (TG)n Simple_repeat Simple_repeat 1 98 0 4 948 288 258 16 0 chr17 47649579 47649641 -47623010 - ID4 SINE ID -13 70 8 4 948 217 180 80 0 chr17 47649641 47649691 -47622960 - MIRc SINE MIR -98 170 117 4 948 550 248 37 22 chr17 47649945 47650081 -47622570 - B1_Mur1 SINE Alu 0 149 12 4 948 293 274 26 105 chr17 47649987 47650101 -47622550 - MT2B LTR ERVL -341 260 156 4 948 947 244 5 5 chr17 47650098 47650300 -47622351 - ID_B1 SINE B4 0 224 23 4 948 263 311 0 0 chr17 47650247 47650321 -47622330 - ID4 SINE ID -9 74 1 4 948 290 172 0 30 chr17 47651274 47651340 -47621311 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 4 948 712 224 142 5 chr17 47651500 47651697 -47620954 + ID_B1 SINE B4 1 224 0 4 948 682 274 86 43 chr17 47651707 47651985 -47620666 + B4 SINE B4 3 292 0 4 948 433 213 0 21 chr17 47652113 47652209 -47620442 + B1_Mur4 SINE Alu 11 104 -46 4 948 562 223 27 161 chr17 47653046 47653106 -47619545 + B3A SINE B2 2 54 -144 4 948 1437 86 32 0 chr17 47653106 47653293 -47619358 - B2_Mm2 SINE B2 -1 194 2 4 948 562 223 27 161 chr17 47653293 47653456 -47619195 + B3A SINE B2 55 195 -3 4 948 552 316 7 0 chr17 47653478 47653617 -47619034 + ID_B1 SINE B4 64 203 -21 4 948 342 0 0 0 chr17 47653617 47653655 -47618996 + (TC)n Simple_repeat Simple_repeat 2 39 0 4 948 489 110 0 0 chr17 47653655 47653727 -47618924 + (TG)n Simple_repeat Simple_repeat 2 74 0 4 948 231 268 14 27 chr17 47654172 47654245 -47618406 - ID2 SINE ID -11 72 1 4 948 335 248 246 8 chr17 47654288 47654406 -47618245 - B1F SINE Alu 0 149 4 4 948 252 0 0 0 chr17 47654432 47654460 -47618191 + (TTG)n Simple_repeat Simple_repeat 2 29 0 4 948 269 231 0 15 chr17 47654529 47654595 -47618056 - Charlie1a DNA MER1_type -354 1101 1037 4 948 1024 282 49 52 chr17 47654840 47655206 -47617445 - MTEb LTR MaLR -1 378 14 4 948 466 242 7 29 chr17 47655446 47655582 -47617069 + PB1D10 SINE Alu 1 130 -20 4 948 673 165 43 43 chr17 47655739 47655878 -47616773 - B1_Mus2 SINE Alu -4 143 5 4 948 693 86 19 0 chr17 47656030 47656135 -47616516 - B1_Mm SINE Alu 0 147 41 4 948 198 71 0 0 chr17 47656145 47656173 -47616478 + (TTTTTG)n Simple_repeat Simple_repeat 1 28 0 4 948 530 262 57 0 chr17 47656368 47656509 -47616142 + B1F2 SINE Alu 1 149 0 4 948 437 247 23 107 chr17 47657402 47657500 -47615151 + B4 SINE B4 3 164 -128 4 948 525 139 0 0 chr17 47657500 47657579 -47615072 + PB1D9 SINE Alu 1 79 -41 4 948 287 238 255 9 chr17 47657601 47657707 -47614944 + ID_B1 SINE B4 1 132 -92 4 948 351 64 0 0 chr17 47657851 47657898 -47614753 - B1_Mus2 SINE Alu -100 47 1 4 948 457 176 92 9 chr17 47657964 47658073 -47614578 + ID_B1 SINE B4 107 224 0 4 948 1218 43 0 0 chr17 47658080 47658220 -47614431 + B1_Mus1 SINE Alu 1 140 -8 4 948 283 301 120 51 chr17 47660058 47660282 -47612369 - MIRb SINE MIR -2 260 5 4 948 723 260 57 48 chr17 47660810 47661020 -47611631 - ID_B1 SINE B4 -10 214 3 4 948 28 0 0 0 chr17 47661179 47661207 -47611444 + GC_rich Low_complexity Low_complexity 1 28 0 4 948 251 366 64 44 chr17 47661971 47662050 -47610601 + ID_B1 SINE B4 12 218 -6 4 948 365 209 79 37 chr17 47662050 47662174 -47610477 + B1_Mur2 SINE Alu 7 143 -6 4 948 220 267 17 0 chr17 47662361 47662421 -47610230 + GA-rich Low_complexity Low_complexity 1 61 0 4 948 1282 122 27 0 chr17 47662430 47662618 -47610033 + B2_Mm2 SINE B2 1 193 -2 4 948 1262 35 0 0 chr17 47662624 47662769 -47609882 + B1_Mm SINE Alu 3 147 0 4 948 310 226 83 64 chr17 47663021 47663130 -47609521 + B2_Mm2 SINE B2 2 112 -83 4 948 1190 81 0 0 chr17 47663176 47663324 -47609327 + B1_Mus1 SINE Alu 1 148 0 4 948 770 219 7 7 chr17 47663360 47663507 -47609144 - B1_Mus2 SINE Alu 0 147 1 4 948 328 180 66 0 chr17 47663570 47663631 -47609020 - ID_B1 SINE B4 -18 206 142 4 948 544 204 0 175 chr17 47664920 47665086 -47607565 - B1_Mur1 SINE Alu 0 149 13 4 948 745 245 120 52 chr17 47665221 47665298 -47607353 - B4A SINE B4 0 292 223 4 948 210 71 0 0 chr17 47665298 47665326 -47607325 + (ATTG)n Simple_repeat Simple_repeat 1 28 0 4 948 745 245 120 52 chr17 47665326 47665515 -47607136 - B4A SINE B4 -70 222 9 4 948 501 196 22 0 chr17 47665547 47665639 -47607012 - B1_Mur2 SINE Alu -48 101 8 4 948 376 259 65 65 chr17 47665665 47665818 -47606833 + MIR SINE MIR 110 262 0 4 948 895 247 100 0 chr17 47666091 47666322 -47606329 + MER82 DNA MER2_type 46 299 -354 4 948 264 40 39 20 chr17 47666361 47666412 -47606239 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 4 948 230 277 135 51 chr17 47666483 47666639 -47606012 - RLTR21 LTR ERVK -319 1253 1085 4 948 983 173 124 0 chr17 47666651 47666836 -47605815 - B3 SINE B2 -6 210 3 4 948 279 0 0 0 chr17 47666854 47666885 -47605766 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 948 743 262 6 6 chr17 47666911 47667076 -47605575 - B3A SINE B2 -32 166 2 4 948 207 69 0 0 chr17 47667113 47667142 -47605509 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 4 948 907 169 0 7 chr17 47667166 47667315 -47605336 - B1_Mur1 SINE Alu -1 148 1 4 948 440 353 45 121 chr17 47667356 47667669 -47604982 + MER82 DNA MER2_type 358 646 -7 4 948 368 274 37 19 chr17 47667682 47667790 -47604861 + PB1D10 SINE Alu 6 115 -2 4 948 293 133 78 48 chr17 47667926 47667944 -47604707 + PB1D9 SINE Alu 57 125 -2 4 948 345 94 38 0 chr17 47667944 47667997 -47604654 + ID_B1 SINE B4 170 224 0 4 948 715 189 7 43 chr17 47668003 47668141 -47604510 + B1_Mur1 SINE Alu 5 137 -12 4 948 373 273 54 108 chr17 47669056 47669204 -47603447 + RSINE1 SINE B4 20 159 -6 4 948 640 232 58 0 chr17 47669254 47669392 -47603259 + B1F1 SINE Alu 2 147 -2 4 948 270 258 266 11 chr17 47669434 47669528 -47603123 + PB1D7 SINE Alu 1 118 -2 4 948 487 268 92 43 chr17 47669536 47669654 -47602997 + ID_B1 SINE B4 7 223 -1 4 948 656 90 0 0 chr17 47669654 47669743 -47602908 + B1_Mus2 SINE Alu 58 146 -1 4 948 547 321 31 40 chr17 47669754 47669978 -47602673 + B4A SINE B4 71 292 0 4 948 1413 65 5 46 chr17 47669991 47670185 -47602466 - B2_Mm2 SINE B2 -8 187 2 4 948 1187 68 7 0 chr17 47670194 47670341 -47602310 - B1_Mus1 SINE Alu 0 148 1 4 948 261 300 0 12 chr17 47670353 47670434 -47602217 + B1F SINE Alu 1 80 -69 4 948 1204 184 10 5 chr17 47670587 47670795 -47601856 + B3 SINE B2 1 209 -7 4 948 294 95 0 0 chr17 47670847 47670889 -47601762 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 948 387 0 0 0 chr17 47670910 47670953 -47601698 + (GA)n Simple_repeat Simple_repeat 1 43 0 4 948 383 285 99 8 chr17 47670961 47671092 -47601559 + RSINE1 SINE B4 22 164 -1 4 948 198 0 0 0 chr17 47671181 47671203 -47601448 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 4 948 501 271 16 0 chr17 47671470 47671592 -47601059 + RSINE1 SINE B4 3 126 -39 4 948 776 156 0 24 chr17 47671635 47671760 -47600891 - B1_Mus1 SINE Alu -5 143 22 4 948 242 270 77 51 chr17 47671867 47671945 -47600706 + RLTR25B LTR ERVK 430 509 -519 4 948 527 112 50 0 chr17 47671886 47671966 -47600685 + B1_Mur2 SINE Alu 44 127 -22 4 948 204 97 0 0 chr17 47671966 47671997 -47600654 + (CAA)n Simple_repeat Simple_repeat 2 32 0 4 948 420 20 0 0 chr17 47672105 47672154 -47600497 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 948 512 314 112 14 chr17 47672248 47672471 -47600180 - B4A SINE B4 -4 288 44 4 948 349 235 12 24 chr17 47673296 47673379 -47599272 + ID4 SINE ID 1 82 -1 4 948 226 235 221 0 chr17 47673460 47673528 -47599123 + RSINE1 SINE B4 79 161 -4 5 948 499 193 238 25 chr17 47673539 47673558 -47599093 + ID_B1 SINE B4 77 224 0 5 948 524 226 29 10 chr17 47673558 47673661 -47598990 + PB1D10 SINE Alu 13 117 0 5 948 450 184 248 26 chr17 47673743 47673833 -47598818 + B1_Mus2 SINE Alu 5 115 -32 5 948 243 0 0 0 chr17 47673833 47673860 -47598791 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 948 450 184 248 26 chr17 47673860 47673886 -47598765 + B1_Mus2 SINE Alu 116 146 -1 5 948 28 0 0 0 chr17 47673965 47673993 -47598658 + AT_rich Low_complexity Low_complexity 1 28 0 5 948 1363 52 0 6 chr17 47673994 47674153 -47598498 + B2_Mm1a SINE B2 2 160 -33 5 948 509 0 16 0 chr17 47674153 47674214 -47598437 + (TAAA)n Simple_repeat Simple_repeat 3 64 0 5 948 1363 52 0 6 chr17 47674214 47674227 -47598424 + B2_Mm1a SINE B2 161 173 -20 5 948 706 175 67 67 chr17 47674216 47674394 -47598257 + B2_Mm2 SINE B2 18 195 0 5 948 233 211 0 0 chr17 47674767 47674824 -47597827 - L1MC4 LINE L1 -2 8040 7984 5 948 881 177 149 11 chr17 47674836 47675024 -47597627 + B3 SINE B2 3 216 0 5 948 339 25 0 0 chr17 47675096 47675136 -47597515 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 948 409 278 92 31 chr17 47675262 47675425 -47597226 - B4A SINE B4 -118 174 2 5 948 239 253 26 13 chr17 47675449 47675525 -47597126 + (TA)n Simple_repeat Simple_repeat 2 78 0 5 948 1814 47 10 118 chr17 47675667 47675956 -47596695 - L1Md_F2 LINE L1 -1 6581 6324 5 948 858 81 73 8 chr17 47675964 47676088 -47596563 - B1_Mur4 SINE Alu -2 148 17 5 948 652 272 29 68 chr17 47676088 47676169 -47596482 - ID_B1 SINE B4 -1 223 27 5 948 368 307 58 32 chr17 47676191 47676346 -47596305 - B3A SINE B2 -15 183 25 5 948 645 262 19 51 chr17 47676368 47676379 -47596272 - RSINE1 SINE B4 -2 163 157 5 948 180 0 0 0 chr17 47676379 47676399 -47596252 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 948 645 262 19 51 chr17 47676399 47676544 -47596107 - RSINE1 SINE B4 -9 156 12 5 948 515 197 241 48 chr17 47676524 47676711 -47595940 - ID_B1 SINE B4 -1 223 1 5 948 368 309 98 78 chr17 47677030 47677234 -47595417 - MLT1C LTR MaLR -163 227 20 5 948 726 117 0 0 chr17 47677485 47677596 -47595055 + (CA)n Simple_repeat Simple_repeat 2 112 0 5 948 419 252 9 27 chr17 47677628 47677738 -47594913 + PB1D10 SINE Alu 1 108 -9 5 948 342 0 0 0 chr17 47677742 47677780 -47594871 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 5 948 873 219 62 43 chr17 47678276 47678534 -47594117 + B4 SINE B4 14 276 -16 5 948 265 286 87 11 chr17 47678500 47678592 -47594059 + B3 SINE B2 113 211 -5 5 948 300 324 109 14 chr17 47678710 47678848 -47593803 - RSINE1 SINE B4 -13 152 2 5 948 22 0 0 0 chr17 47679350 47679372 -47593279 + GC_rich Low_complexity Low_complexity 1 22 0 5 948 215 318 130 49 chr17 47679737 47679899 -47592752 - MER5A DNA MER1_type -1 188 14 5 948 323 271 14 0 chr17 47680016 47680086 -47592565 + ID_B1 SINE B4 133 203 -21 5 948 460 248 116 0 chr17 47680080 47680201 -47592450 + RSINE1 SINE B4 9 143 -22 5 948 186 43 0 0 chr17 47680206 47680229 -47592422 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 948 264 244 51 13 chr17 47680666 47680745 -47591906 + ID2 SINE ID 2 83 0 5 948 716 198 74 46 chr17 47680812 47680987 -47591664 - B3 SINE B2 0 216 37 5 948 375 23 0 0 chr17 47681006 47681050 -47591601 + (ACTG)n Simple_repeat Simple_repeat 4 47 0 5 948 912 137 27 20 chr17 47681051 47681200 -47591451 - B1_Mur4 SINE Alu 0 150 1 5 948 197 33 0 32 chr17 47681216 47681247 -47591404 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 5 948 652 221 38 8 chr17 47681252 47681384 -47591267 + B1F SINE Alu 2 137 -12 5 948 1197 35 0 27 chr17 47681422 47681568 -47591083 + B1_Mus2 SINE Alu 2 143 -4 5 948 420 20 0 0 chr17 47681731 47681780 -47590871 + (TTA)n Simple_repeat Simple_repeat 2 50 0 5 948 293 320 118 75 chr17 47681801 47681987 -47590664 + B3A SINE B2 5 198 0 5 948 315 325 150 0 chr17 47682308 47682428 -47590223 + RSINE1 SINE B4 28 165 0 5 948 251 215 43 71 chr17 47682471 47682541 -47590110 + MT2B2 LTR ERVL 167 234 -350 5 948 437 266 70 9 chr17 47682481 47682595 -47590056 + ID_B1 SINE B4 91 211 -13 5 948 265 229 0 0 chr17 47682628 47682689 -47589962 + C-rich Low_complexity Low_complexity 1 61 0 5 948 207 100 0 0 chr17 47683324 47683354 -47589297 + (T)n Simple_repeat Simple_repeat 1 30 0 5 948 242 297 70 26 chr17 47683374 47683488 -47589163 + B1F1 SINE Alu 14 132 -17 5 948 324 341 0 0 chr17 47683506 47683588 -47589063 + ID SINE ID 2 83 -141 5 948 308 337 0 11 chr17 47683588 47683599 -47589052 + BC1_Mm scRNA scRNA 2 93 -59 5 948 370 283 0 48 chr17 47683700 47683804 -47588847 + PB1 SINE Alu 27 125 -2 5 948 1251 35 0 0 chr17 47683807 47683951 -47588700 + B1_Mus2 SINE Alu 1 144 -3 5 948 316 149 170 16 chr17 47683991 47684076 -47588575 + B1_Mur3 SINE Alu 3 98 -49 5 948 311 221 0 38 chr17 47684094 47684174 -47588477 - ID4_ SINE ID -6 77 1 5 948 249 33 0 0 chr17 47684215 47684245 -47588406 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 948 375 309 18 0 chr17 47684245 47684355 -47588296 - RSINE1 SINE B4 -32 133 22 5 948 246 194 83 0 chr17 47684378 47684450 -47588201 - ID4 SINE ID -3 80 3 5 948 360 312 22 52 chr17 47684461 47684596 -47588055 - B1F SINE Alu 0 149 19 5 948 824 135 24 0 chr17 47684672 47684798 -47587853 - B3 SINE B2 -86 130 2 5 948 621 0 0 0 chr17 47684807 47684876 -47587775 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 5 948 1175 63 0 0 chr17 47684879 47685021 -47587630 - B1_Mus1 SINE Alu -6 142 1 5 948 265 149 30 0 chr17 47685057 47685124 -47587527 + (TATATG)n Simple_repeat Simple_repeat 1 69 0 5 948 333 230 78 26 chr17 47685124 47685240 -47587411 - L1M5 LINE L1 -366 5798 5677 5 948 429 338 58 32 chr17 47685265 47685421 -47587230 - RSINE1 SINE B4 -4 161 2 5 948 960 106 0 34 chr17 47685549 47685560 -47587091 - B1_Mus1 SINE Alu -1 147 140 5 948 803 64 0 9 chr17 47685560 47685671 -47586980 + (TTCC)n Simple_repeat Simple_repeat 3 112 0 5 948 960 106 0 34 chr17 47685671 47685805 -47586846 - B1_Mus1 SINE Alu -9 139 7 5 948 426 287 40 69 chr17 47685809 47685910 -47586741 - PB1 SINE Alu -7 120 15 5 948 211 275 14 68 chr17 47685932 47686006 -47586645 - B1F2 SINE Alu -20 129 60 5 948 541 347 75 0 chr17 47685952 47686151 -47586500 - ID_B1 SINE B4 -5 219 6 5 948 414 0 0 0 chr17 47686172 47686218 -47586433 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 948 1041 32 0 0 chr17 47686218 47686342 -47586309 + (GA)n Simple_repeat Simple_repeat 1 125 0 5 948 282 262 81 35 chr17 47686657 47686744 -47585907 - MLT1J2 LTR MaLR -355 93 3 5 948 468 311 67 0 chr17 47686920 47687055 -47585596 + ID_B1 SINE B4 80 223 -1 5 948 201 94 0 0 chr17 47687105 47687137 -47585514 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 948 288 154 0 0 chr17 47687328 47687380 -47585271 + (CATG)n Simple_repeat Simple_repeat 4 55 0 5 948 429 233 110 11 chr17 47687381 47687472 -47585179 - RSINE1 SINE B4 -36 129 30 5 948 198 103 0 0 chr17 47687507 47687536 -47585115 + (GGA)n Simple_repeat Simple_repeat 3 31 0 5 948 366 274 37 142 chr17 47687805 47687982 -47584669 + MT2B LTR ERVL 11 159 -442 5 948 477 184 67 0 chr17 47687982 47688081 -47584570 + B1_Mur2 SINE Alu 3 107 -13 5 948 26 30 0 0 chr17 47688491 47688524 -47584127 + AT_rich Low_complexity Low_complexity 1 33 0 5 948 335 355 36 0 chr17 47688524 47688662 -47583989 + ID_B1 SINE B4 81 223 -1 5 948 634 289 26 0 chr17 47688739 47688891 -47583760 + RSINE1 SINE B4 3 158 -7 5 948 414 0 0 0 chr17 47688895 47688941 -47583710 + (CCA)n Simple_repeat Simple_repeat 3 48 0 5 948 372 289 80 32 chr17 47689044 47689169 -47583482 + ID_B1 SINE B4 86 216 -8 5 948 1136 75 0 14 chr17 47689204 47689352 -47583299 - B1_Mus1 SINE Alu -1 147 2 5 948 362 226 71 12 chr17 47689379 47689464 -47583187 + RSINE1 SINE B4 74 163 -2 5 948 836 218 0 7 chr17 47689491 47689639 -47583012 + B1_Mus2 SINE Alu 1 147 0 5 948 1108 88 0 0 chr17 47689641 47689778 -47582873 + B1_Mm SINE Alu 1 137 -10 5 948 250 254 0 0 chr17 47689791 47689858 -47582793 + A-rich Low_complexity Low_complexity 1 67 0 5 948 21 36 0 0 chr17 47689874 47689902 -47582749 + AT_rich Low_complexity Low_complexity 1 28 0 5 948 728 279 66 46 chr17 47689919 47690178 -47582473 + B4A SINE B4 27 290 -2 5 948 279 0 0 0 chr17 47690205 47690236 -47582415 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 948 441 207 0 22 chr17 47690320 47690409 -47582242 - ID_B1 SINE B4 -1 223 137 5 948 465 301 6 25 chr17 47690409 47690569 -47582082 + RSINE1 SINE B4 2 158 -7 5 948 425 18 35 0 chr17 47690689 47690746 -47581905 + (TCTCTG)n Simple_repeat Simple_repeat 6 64 0 5 948 246 128 0 0 chr17 47690746 47690784 -47581867 + (TATG)n Simple_repeat Simple_repeat 4 42 0 5 948 412 288 38 44 chr17 47690785 47690945 -47581706 - RSINE1 SINE B4 -6 159 1 5 948 733 189 166 0 chr17 47690998 47691167 -47581484 - B3 SINE B2 -19 197 1 5 948 384 285 112 15 chr17 47691250 47691446 -47581205 - RMER12 LTR ERVK -334 988 774 5 948 231 244 12 60 chr17 47691459 47691542 -47581109 + Charlie18a DNA MER1_type 257 335 -7 5 948 23 0 0 0 chr17 47691614 47691637 -47581014 + GC_rich Low_complexity Low_complexity 1 23 0 6 948 26 0 0 0 chr17 47691967 47691993 -47580658 + AT_rich Low_complexity Low_complexity 1 26 0 6 948 688 243 59 10 chr17 47692052 47692231 -47580420 - B3A SINE B2 -14 179 3 6 948 248 239 54 40 chr17 47692281 47692355 -47580296 - B1_Mm SINE Alu -1 146 72 6 948 1112 209 23 32 chr17 47692698 47692916 -47579735 + B3 SINE B2 1 216 0 6 948 1102 71 42 7 chr17 47692928 47693070 -47579581 + B1_Mus2 SINE Alu 1 147 0 6 948 303 93 0 0 chr17 47693071 47693114 -47579537 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 6 948 339 307 43 56 chr17 47693132 47693294 -47579357 + RSINE1 SINE B4 2 161 -4 6 948 315 0 0 0 chr17 47693294 47693329 -47579322 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 6 948 942 120 7 7 chr17 47693329 47693472 -47579179 - B1_Mur4 SINE Alu -7 143 1 6 948 610 236 0 65 chr17 47693552 47693705 -47578946 + ID_B1 SINE B4 82 220 -4 6 948 542 312 2 7 chr17 47694047 47694188 -47578463 + ID_B1 SINE B4 86 221 -3 6 948 605 230 54 83 chr17 47694205 47694409 -47578242 + B3A SINE B2 1 198 0 6 948 288 227 91 26 chr17 47694547 47694624 -47578027 + ID4 SINE ID 2 83 0 6 948 939 145 10 13 chr17 47694817 47695124 -47577527 + (TCCA)n Simple_repeat Simple_repeat 1 306 0 6 948 356 181 356 15 chr17 47695281 47695416 -47577235 + B3A SINE B2 2 182 -16 6 948 540 317 49 0 chr17 47695493 47695635 -47577016 + ID_B1 SINE B4 9 157 -67 6 948 983 247 44 41 chr17 47695667 47695937 -47576714 + B4 SINE B4 22 292 0 6 948 322 143 0 0 chr17 47695969 47696018 -47576633 + ID_B1 SINE B4 175 223 -1 6 948 477 291 22 59 chr17 47696022 47696157 -47576494 + B1_Mur2 SINE Alu 2 131 -18 6 948 387 326 35 28 chr17 47696160 47696302 -47576349 + B4A SINE B4 28 170 -122 6 948 392 0 0 20 chr17 47696399 47696448 -47576203 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 948 858 259 79 57 chr17 47697071 47697334 -47575317 + B4A SINE B4 1 269 -23 6 948 431 63 16 0 chr17 47697334 47697397 -47575254 + (CA)n Simple_repeat Simple_repeat 2 65 0 6 948 858 259 79 57 chr17 47697397 47697412 -47575239 + B4A SINE B4 270 285 -7 6 948 512 279 64 0 chr17 47697610 47697750 -47574901 - RSINE1 SINE B4 -15 150 2 6 948 257 239 0 32 chr17 47698103 47698198 -47574453 + (TG)n Simple_repeat Simple_repeat 1 92 0 6 948 392 282 42 55 chr17 47698216 47698381 -47574270 - RSINE1 SINE B4 0 165 3 6 948 189 0 0 0 chr17 47698480 47698501 -47574150 + (TC)n Simple_repeat Simple_repeat 2 22 0 6 948 351 0 0 0 chr17 47698508 47698547 -47574104 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 948 306 0 0 0 chr17 47698575 47698609 -47574042 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 6 948 333 0 0 0 chr17 47698716 47698753 -47573898 + (TATG)n Simple_repeat Simple_repeat 2 38 0 6 948 306 337 0 11 chr17 47698864 47698951 -47573700 + MIRb SINE MIR 118 203 -65 6 948 374 250 59 29 chr17 47698959 47699095 -47573556 + B4A SINE B4 81 220 -72 6 948 715 285 10 41 chr17 47699115 47699309 -47573342 + B3A SINE B2 11 198 0 6 948 198 103 0 0 chr17 47699314 47699343 -47573308 + (ATG)n Simple_repeat Simple_repeat 2 30 0 6 948 561 198 40 0 chr17 47699365 47699466 -47573185 + B1_Mur1 SINE Alu 40 144 -5 6 948 235 307 169 23 chr17 47699757 47699887 -47572764 - MIRb SINE MIR -52 216 68 6 948 656 209 6 63 chr17 47699967 47700125 -47572526 - B1_Mur2 SINE Alu 0 149 1 6 948 340 287 131 8 chr17 47700150 47700280 -47572371 - ID_B1 SINE B4 -2 222 77 6 948 381 351 75 0 chr17 47700301 47700435 -47572216 - ID_B1 SINE B4 -5 219 76 6 948 902 148 0 0 chr17 47700482 47700617 -47572034 - B1_Mus2 SINE Alu -3 144 10 6 948 501 302 7 32 chr17 47700484 47700638 -47572013 - ID_B1 SINE B4 -5 219 70 6 948 217 276 52 0 chr17 47700660 47700718 -47571933 + B4A SINE B4 82 142 -150 6 948 257 228 18 0 chr17 47700730 47700787 -47571864 + B1_Mur2 SINE Alu 40 97 -52 6 948 1070 0 0 16 chr17 47700815 47700942 -47571709 + (TCTA)n Simple_repeat Simple_repeat 2 126 0 6 948 428 259 262 12 chr17 47700946 47701106 -47571545 - B3 SINE B2 -16 200 1 6 948 369 232 43 113 chr17 47701110 47701251 -47571400 - B3A SINE B2 0 198 68 6 948 388 276 8 33 chr17 47701273 47701393 -47571258 + PB1D10 SINE Alu 1 117 0 6 948 507 254 0 0 chr17 47701464 47701574 -47571077 + PB1D7 SINE Alu 1 110 -10 6 948 285 296 191 35 chr17 47701577 47701808 -47570843 - Arthur1 DNA Tip100 -424 3523 3257 6 948 267 279 12 25 chr17 47701879 47701960 -47570691 + ID4_ SINE ID 2 81 -2 6 948 698 217 14 27 chr17 47701981 47702128 -47570523 + B1F SINE Alu 5 149 0 6 948 262 310 74 43 chr17 47702180 47702212 -47570439 - PB1D7 SINE Alu 0 149 110 6 948 197 33 33 0 chr17 47702222 47702252 -47570399 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 948 1167 28 35 28 chr17 47702252 47702386 -47570265 - B1_Mus1 SINE Alu -9 139 1 6 948 262 280 44 53 chr17 47702386 47702487 -47570164 - PB1D7 SINE Alu -11 109 9 6 948 837 124 29 0 chr17 47702495 47702632 -47570019 - URR1B DNA MER1_type 0 225 85 6 948 1087 52 7 0 chr17 47703011 47703147 -47569504 + B1_Mus1 SINE Alu 2 138 -10 6 948 1559 175 166 23 chr17 47703213 47703599 -47569052 + RMER10A LTR ERVL 2 442 0 6 948 350 291 30 118 chr17 47703704 47703730 -47568921 - B2_Mm1a SINE B2 -6 187 164 6 948 260 27 27 0 chr17 47703730 47703767 -47568884 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 948 810 209 1 40 chr17 47703767 47703943 -47568708 - B3 SINE B2 -30 163 3 6 948 462 124 0 0 chr17 47704106 47704195 -47568456 + (GA)n Simple_repeat Simple_repeat 2 90 0 6 948 886 108 8 30 chr17 47704606 47704740 -47567911 - B1_Mur3 SINE Alu -18 131 1 6 948 322 224 59 0 chr17 47704742 47704827 -47567824 + MIR SINE MIR 59 148 -114 6 948 801 137 40 0 chr17 47704827 47704951 -47567700 + B1_Mur4 SINE Alu 22 150 0 6 948 225 94 0 0 chr17 47704964 47704996 -47567655 + (TATG)n Simple_repeat Simple_repeat 1 32 0 6 948 22 56 0 0 chr17 47705012 47705048 -47567603 + AT_rich Low_complexity Low_complexity 1 36 0 6 948 1162 88 0 0 chr17 47705092 47705240 -47567411 + B1_Mus1 SINE Alu 1 148 0 6 948 349 231 128 0 chr17 47705403 47705481 -47567170 - B4 SINE B4 -203 89 2 6 948 816 187 0 0 chr17 47705515 47705649 -47567002 - B1_Mur4 SINE Alu -6 144 11 6 948 231 88 0 0 chr17 47705674 47705708 -47566943 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 948 679 274 16 53 chr17 47705718 47705907 -47566744 - B3A SINE B2 -16 182 1 6 948 222 337 31 52 chr17 47705930 47706027 -47566624 - PB1D10 SINE Alu -20 97 3 6 948 613 280 7 0 chr17 47706041 47706184 -47566467 - ID_B1 SINE B4 0 224 81 6 948 632 184 16 10 chr17 47706533 47706661 -47565990 - B1_Mur3 SINE Alu -9 140 2 6 948 421 184 0 38 chr17 47706722 47706801 -47565850 - B1_Mur1 SINE Alu -18 131 56 6 948 510 340 50 12 chr17 47706824 47706985 -47565666 - ID_B1 SINE B4 -1 223 57 6 948 398 234 117 0 chr17 47707075 47707169 -47565482 + PB1D10 SINE Alu 2 106 -11 6 948 318 67 0 0 chr17 47707172 47707217 -47565434 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 948 500 208 142 16 chr17 47707219 47707346 -47565305 + B1F SINE Alu 7 149 0 6 948 608 198 81 0 chr17 47707236 47707347 -47565304 + ID_B1 SINE B4 105 224 0 6 948 1420 85 27 0 chr17 47707348 47707536 -47565115 + B2_Mm1t SINE B2 1 193 0 6 948 763 279 48 29 chr17 47707573 47707846 -47564805 + B4A SINE B4 2 279 -13 6 948 224 284 15 0 chr17 47707867 47707934 -47564717 + (CA)n Simple_repeat Simple_repeat 1 68 0 6 948 1005 122 0 33 chr17 47707958 47708111 -47564540 + B1_Mur4 SINE Alu 1 148 -2 6 948 307 173 12 12 chr17 47708137 47708219 -47564432 + (TA)n Simple_repeat Simple_repeat 2 83 0 6 948 210 37 0 0 chr17 47708219 47708246 -47564405 + (ATTG)n Simple_repeat Simple_repeat 1 27 0 6 948 481 240 32 8 chr17 47708724 47708850 -47563801 + MamRep605 Unknown Unknown 107 235 -641 6 948 304 239 95 32 chr17 47709424 47709519 -47563132 - PB1D10 SINE Alu -4 113 13 6 948 647 221 0 64 chr17 47709763 47709903 -47562748 - B1_Mur1 SINE Alu -2 147 17 6 948 225 338 26 80 chr17 47709774 47709925 -47562726 - B4A SINE B4 -73 219 77 6 948 469 257 29 0 chr17 47709928 47710033 -47562618 + PB1D10 SINE Alu 3 110 -7 6 948 220 320 100 30 chr17 47710056 47710156 -47562495 + PB1D10 SINE Alu 1 107 -10 6 949 245 146 55 0 chr17 47710732 47710787 -47561864 + C-rich Low_complexity Low_complexity 1 58 0 6 949 779 179 19 0 chr17 47710794 47710956 -47561695 + CT-rich Low_complexity Low_complexity 5 169 0 6 949 450 0 0 0 chr17 47711617 47711667 -47560984 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 949 694 232 25 29 chr17 47711675 47711839 -47560812 + ID_B1 SINE B4 98 266 -26 6 949 411 169 0 0 chr17 47712012 47712083 -47560568 + B1_Mur3 SINE Alu 73 143 -6 6 949 381 200 52 72 chr17 47712365 47712462 -47560189 - RSINE1 SINE B4 0 165 71 6 949 308 320 0 13 chr17 47712614 47712690 -47559961 - RSINE1 SINE B4 -86 79 5 6 949 25 0 0 0 chr17 47712740 47712765 -47559886 + GC_rich Low_complexity Low_complexity 1 25 0 6 949 241 272 34 142 chr17 47713011 47713187 -47559464 - B4A SINE B4 0 292 136 7 949 350 299 35 35 chr17 47713216 47713358 -47559293 - ID_B1 SINE B4 -3 221 80 7 949 1183 82 0 0 chr17 47713376 47713523 -47559128 - B1_Mus2 SINE Alu 0 147 1 7 949 290 308 8 15 chr17 47713527 47713659 -47558992 - L1MB5 LINE L1 -226 5948 5818 7 949 676 248 0 27 chr17 47713832 47713981 -47558670 + B1_Mur3 SINE Alu 3 147 -2 7 949 771 138 14 55 chr17 47714192 47714338 -47558313 + B1_Mur4 SINE Alu 11 150 0 7 949 244 295 61 147 chr17 47714444 47714607 -47558044 + RSINE1 SINE B4 6 154 -11 7 949 507 45 0 0 chr17 47714616 47714682 -47557969 + (TC)n Simple_repeat Simple_repeat 1 66 0 7 949 288 0 0 0 chr17 47714682 47714714 -47557937 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 949 305 256 125 23 chr17 47714727 47714815 -47557836 + ID_B1 SINE B4 115 211 -13 7 949 710 233 23 0 chr17 47714988 47715117 -47557534 - B1_Mur1 SINE Alu -12 137 6 7 949 595 244 36 66 chr17 47715154 47715321 -47557330 - RSINE1 SINE B4 0 165 4 7 949 542 254 78 28 chr17 47716057 47716199 -47556452 + RSINE1 SINE B4 1 149 -16 7 949 337 291 81 59 chr17 47716065 47716251 -47556400 + B2_Mm2 SINE B2 6 195 0 7 949 1196 186 147 35 chr17 47716273 47716585 -47556066 - RMER10B LTR ERVL -50 348 2 7 949 312 264 35 26 chr17 47716602 47716715 -47555936 + Charlie16a DNA MER1_type 124 237 -105 7 949 231 36 0 0 chr17 47716746 47716774 -47555877 + (T)n Simple_repeat Simple_repeat 1 28 0 7 949 1243 54 0 0 chr17 47716774 47716921 -47555730 - B1_Mus2 SINE Alu 0 147 1 7 949 240 111 0 0 chr17 47716948 47716984 -47555667 + (T)n Simple_repeat Simple_repeat 1 36 0 7 949 1151 88 0 0 chr17 47716984 47717131 -47555520 - B1_Mus1 SINE Alu 0 148 2 7 949 292 221 101 52 chr17 47717201 47717303 -47555348 + PB1D10 SINE Alu 4 115 -2 7 949 213 39 0 0 chr17 47717601 47717627 -47555024 + (TG)n Simple_repeat Simple_repeat 2 27 0 7 949 252 0 0 0 chr17 47717639 47717667 -47554984 + (T)n Simple_repeat Simple_repeat 1 28 0 7 949 822 118 31 0 chr17 47717669 47717796 -47554855 - B1_Mus2 SINE Alu 0 147 17 7 949 441 214 0 0 chr17 47717801 47717899 -47554752 + (TA)n Simple_repeat Simple_repeat 2 99 0 7 949 424 333 56 0 chr17 47717907 47718033 -47554618 - RSINE1 SINE B4 -6 159 27 7 949 486 262 41 8 chr17 47718101 47718224 -47554427 + RSINE1 SINE B4 3 129 -36 7 949 423 0 0 0 chr17 47718225 47718272 -47554379 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 949 1204 49 7 0 chr17 47718362 47718506 -47554145 + B1_Mus2 SINE Alu 1 145 -2 7 949 206 0 0 65 chr17 47718506 47718537 -47554114 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 949 513 183 114 9 chr17 47718553 47718658 -47553993 + PB1D9 SINE Alu 3 118 -2 7 949 212 59 29 0 chr17 47718715 47718749 -47553902 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 949 545 298 97 35 chr17 47718797 47719054 -47553597 - B4A SINE B4 -18 274 2 7 949 998 136 18 0 chr17 47719072 47719293 -47553358 + CT-rich Low_complexity Low_complexity 1 225 0 7 949 1130 30 0 8 chr17 47719293 47719426 -47553225 - B1_Mus1 SINE Alu -12 136 5 7 949 375 121 0 0 chr17 47719443 47719501 -47553150 + (T)n Simple_repeat Simple_repeat 1 58 0 7 949 1231 48 0 0 chr17 47719501 47719648 -47553003 - B1_Mus2 SINE Alu 0 147 1 7 949 614 221 16 0 chr17 47719716 47719843 -47552808 - B1_Mur1 SINE Alu -12 137 9 7 949 507 269 143 23 chr17 47719850 47720025 -47552626 - B3A SINE B2 -2 196 1 7 949 483 289 25 38 chr17 47720025 47720183 -47552468 - ID_B1 SINE B4 -66 158 3 7 949 180 0 0 0 chr17 47720231 47720251 -47552400 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 949 320 273 77 48 chr17 47720255 47720359 -47552292 - B3A SINE B2 -38 160 54 7 949 204 40 0 0 chr17 47720398 47720423 -47552228 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 7 949 906 131 0 30 chr17 47720423 47720557 -47552094 - B1_Mur1 SINE Alu -11 138 9 7 949 297 313 89 20 chr17 47720806 47720907 -47551744 - MLT1L LTR MaLR -48 562 455 7 949 243 318 65 124 chr17 47720969 47721138 -47551513 + ID_B1 SINE B4 66 224 0 7 949 407 278 114 45 chr17 47721007 47721139 -47551512 + B1F1 SINE Alu 9 149 0 7 949 613 258 69 88 chr17 47721171 47721375 -47551276 + ID_B1 SINE B4 22 221 -3 7 949 349 305 0 0 chr17 47721370 47721452 -47551199 + ID_B1 SINE B4 143 224 0 7 949 963 49 8 0 chr17 47721526 47721648 -47551003 + B2_Mm1t SINE B2 1 123 -70 7 949 916 144 0 33 chr17 47721808 47721959 -47550692 + B1_Mur2 SINE Alu 3 148 -1 7 949 507 294 118 46 chr17 47722090 47722243 -47550408 + RSINE1 SINE B4 2 165 0 7 949 677 286 43 10 chr17 47722272 47722480 -47550171 + ID_B1 SINE B4 1 215 -9 7 949 207 0 0 0 chr17 47722740 47722763 -47549888 + (TTG)n Simple_repeat Simple_repeat 2 24 0 7 949 1227 61 0 0 chr17 47722767 47722914 -47549737 - B1_Mus2 SINE Alu 0 147 1 7 949 354 361 68 58 chr17 47722982 47723188 -47549463 + LTR16C LTR ERVL 43 250 -239 7 949 720 101 10 0 chr17 47723200 47723299 -47549352 - B3 SINE B2 -115 101 2 7 949 21 36 0 0 chr17 47723316 47723344 -47549307 + AT_rich Low_complexity Low_complexity 1 28 0 7 949 863 184 0 0 chr17 47723636 47723777 -47548874 - B1_Mur1 SINE Alu -7 142 2 7 949 930 175 7 0 chr17 47723802 47723945 -47548706 - B1_Mur3 SINE Alu 0 149 6 7 949 502 268 31 107 chr17 47723804 47723963 -47548688 - B4 SINE B4 -69 223 77 7 949 345 280 86 86 chr17 47723846 47724036 -47548615 - MT2B LTR ERVL -327 257 65 7 949 438 218 0 0 chr17 47724004 47724082 -47548569 - ID_B1 SINE B4 -2 222 145 7 949 249 360 50 0 chr17 47724082 47724104 -47548547 - B1_Mus2 SINE Alu -2 145 41 7 949 823 188 0 7 chr17 47724119 47724264 -47548387 - B1_Mur3 SINE Alu -5 144 1 7 949 1167 90 54 38 chr17 47724270 47724455 -47548196 - B2_Mm2 SINE B2 -4 191 4 7 949 379 110 55 0 chr17 47724461 47724534 -47548117 + T-rich Low_complexity Low_complexity 2 78 0 7 949 478 252 137 0 chr17 47724561 47724692 -47547959 - B1F1 SINE Alu 0 149 1 7 949 877 194 76 10 chr17 47724730 47724928 -47547723 - B3 SINE B2 -3 213 3 7 949 1207 68 0 7 chr17 47725105 47725254 -47547397 + B1_Mus1 SINE Alu 1 148 0 7 949 250 297 27 13 chr17 47725335 47725410 -47547241 - ID4 SINE ID -6 77 2 7 949 527 275 0 24 chr17 47725484 47725607 -47547044 - PB1D7 SINE Alu 0 120 1 7 949 468 0 0 0 chr17 47725850 47725902 -47546749 + (TC)n Simple_repeat Simple_repeat 1 52 0 7 949 396 0 0 0 chr17 47725908 47725952 -47546699 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 949 519 112 0 0 chr17 47726261 47726341 -47546310 + (TCC)n Simple_repeat Simple_repeat 3 82 0 7 949 306 0 0 0 chr17 47726344 47726378 -47546273 + (TC)n Simple_repeat Simple_repeat 1 34 0 7 949 230 138 0 71 chr17 47726387 47726434 -47546217 + (TTTG)n Simple_repeat Simple_repeat 1 43 0 7 949 594 222 163 69 chr17 47726434 47726637 -47546014 - ID_B1 SINE B4 -2 222 1 7 949 230 138 0 71 chr17 47726637 47726659 -47545992 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 7 949 903 10 0 0 chr17 47727260 47727364 -47545287 + (GA)n Simple_repeat Simple_repeat 1 104 0 7 949 273 29 0 0 chr17 47727534 47727568 -47545083 + (TC)n Simple_repeat Simple_repeat 1 34 0 7 949 229 227 0 43 chr17 47727830 47727876 -47544775 + ID4 SINE ID 1 44 -39 7 949 338 346 63 38 chr17 47727910 47728147 -47544504 + MIR SINE MIR 20 262 0 7 949 488 275 0 115 chr17 47728229 47728385 -47544266 + B1F2 SINE Alu 10 147 -2 7 949 431 232 83 10 chr17 47728410 47728506 -47544145 + ID_B1 SINE B4 115 217 -7 7 949 236 287 38 113 chr17 47728530 47728636 -47544015 + MT2B2 LTR ERVL 153 250 -334 7 949 388 266 62 21 chr17 47728550 47728646 -47544005 + PB1D10 SINE Alu 8 107 -10 7 949 207 186 0 0 chr17 47728919 47728962 -47543689 + CT-rich Low_complexity Low_complexity 3 45 0 7 949 710 217 21 7 chr17 47728985 47729129 -47543522 - B1_Mur1 SINE Alu 0 149 4 7 949 387 0 0 0 chr17 47729130 47729173 -47543478 + (TTCC)n Simple_repeat Simple_repeat 3 45 0 7 949 576 228 287 0 chr17 47729247 47729414 -47543237 - ID_B1 SINE B4 -8 216 2 7 949 405 0 0 0 chr17 47729427 47729472 -47543179 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 949 252 0 0 0 chr17 47729472 47729500 -47543151 + (GA)n Simple_repeat Simple_repeat 1 28 0 7 949 690 219 6 85 chr17 47729725 47729890 -47542761 - RSINE1 SINE B4 0 165 14 7 949 22 35 0 0 chr17 47730635 47730664 -47541987 + GC_rich Low_complexity Low_complexity 1 29 0 7 949 243 0 0 0 chr17 47732719 47732746 -47539905 + (A)n Simple_repeat Simple_repeat 1 27 0 7 949 25 0 0 0 chr17 47735117 47735142 -47537509 + AT_rich Low_complexity Low_complexity 1 25 0 7 949 355 187 242 0 chr17 47736938 47737029 -47535622 + B3 SINE B2 14 126 -90 7 949 186 43 0 0 chr17 47737180 47737203 -47535448 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 7 949 250 352 61 36 chr17 47737230 47737395 -47535256 - Tigger9b DNA MER2_type -454 170 2 7 949 236 173 94 19 chr17 47737439 47737492 -47535159 - PB1D9 SINE Alu -2 118 62 8 949 256 306 92 59 chr17 47737513 47737666 -47534985 + RLTR25B LTR ERVK 364 521 -507 8 949 662 189 0 54 chr17 47737559 47737688 -47534963 + B1_Mus2 SINE Alu 26 147 0 8 949 1602 32 5 0 chr17 47739934 47740121 -47532530 + B2_Mm1a SINE B2 5 192 -1 8 949 962 151 42 21 chr17 47740138 47740327 -47532324 + B2_Mm2 SINE B2 1 193 -2 8 949 212 0 36 0 chr17 47740378 47740406 -47532245 + (TAA)n Simple_repeat Simple_repeat 2 30 0 8 949 268 134 97 69 chr17 47740450 47740522 -47532129 + MT2B LTR ERVL 191 264 -337 8 949 680 24 0 0 chr17 47740473 47740552 -47532099 + B1_Mur4 SINE Alu 67 145 -5 8 949 186 43 0 0 chr17 47740552 47740575 -47532076 + (CAA)n Simple_repeat Simple_repeat 2 24 0 8 949 651 219 8 0 chr17 47741435 47741563 -47531088 - B1_Mus2 SINE Alu -2 145 17 8 949 263 236 155 41 chr17 47741481 47741578 -47531073 - RLTR25B LTR ERVK -530 498 391 8 949 389 275 60 74 chr17 47741577 47741592 -47531059 + B4 SINE B4 80 224 -66 8 949 542 169 77 19 chr17 47741592 47741724 -47530927 + B1_Mur1 SINE Alu 7 149 -1 8 949 429 216 81 20 chr17 47741744 47741843 -47530808 - U6 snRNA snRNA -1 106 2 8 949 445 226 51 17 chr17 47741967 47742122 -47530529 + MIRm SINE MIR 13 167 -101 8 949 309 206 74 102 chr17 47742244 47742269 -47530382 + MT2B LTR ERVL 134 155 -446 8 949 511 221 0 2 chr17 47742269 47742383 -47530268 + B1_Mur4 SINE Alu 2 114 -35 8 949 1190 118 6 0 chr17 47743259 47743428 -47529223 + B2_Mm1t SINE B2 2 171 -22 8 949 345 111 380 9 chr17 47743465 47743573 -47529078 + B2_Mm2 SINE B2 48 195 0 8 949 587 314 57 58 chr17 47744702 47745100 -47527551 + RLTR12B LTR ERVK 18 301 -227 8 949 266 222 62 31 chr17 47745173 47745238 -47527413 - B1F2 SINE Alu -82 67 1 8 949 829 261 44 10 chr17 47745421 47745626 -47527025 - B3 SINE B2 0 216 5 8 949 240 279 58 122 chr17 47745532 47745671 -47526980 + B4 SINE B4 163 292 0 8 949 405 297 54 15 chr17 47745828 47745958 -47526693 - B4 SINE B4 -52 240 106 8 949 387 308 157 77 chr17 47746083 47746396 -47526255 - L2 LINE L2 -619 2800 2439 8 949 1090 108 0 0 chr17 47746396 47746544 -47526107 - B1_Mus1 SINE Alu 0 148 1 8 949 387 308 157 77 chr17 47746544 47746708 -47525943 - L2 LINE L2 -981 2438 2285 8 949 252 189 40 67 chr17 47746708 47746730 -47525921 + FAM SINE Alu 261 306 -5 8 949 245 215 0 110 chr17 47746730 47746803 -47525848 + ID_B1 SINE B4 160 224 0 8 949 488 281 50 14 chr17 47746810 47746951 -47525700 + ID_B1 SINE B4 79 224 0 8 949 296 254 242 50 chr17 47747263 47747383 -47525268 - ID_B1 SINE B4 0 224 82 8 949 984 83 68 0 chr17 47747561 47747693 -47524958 + B1_Mus1 SINE Alu 3 143 -5 8 949 693 170 7 54 chr17 47749130 47749279 -47523372 - B1_Mur4 SINE Alu -6 144 3 8 949 583 191 0 71 chr17 47749656 47749769 -47522882 + B1_Mur4 SINE Alu 1 107 -43 8 949 577 266 65 87 chr17 47750251 47750436 -47522215 - B3A SINE B2 0 216 36 8 949 259 222 19 0 chr17 47750419 47750473 -47522178 + PB1D7 SINE Alu 66 120 0 8 949 590 246 52 14 chr17 47750520 47750676 -47521975 + B3 SINE B2 1 151 -44 8 949 379 109 0 0 chr17 47750673 47750728 -47521923 - B2_Mm2 SINE B2 -94 101 47 8 949 1100 126 66 0 chr17 47750756 47750923 -47521728 - B2_Mm1t SINE B2 -14 179 2 8 949 315 272 106 61 chr17 47751247 47751280 -47521371 - B2_Mm1a SINE B2 -5 188 160 8 949 689 199 95 7 chr17 47751280 47751417 -47521234 - B1_Mur2 SINE Alu 0 149 1 8 949 403 240 114 18 chr17 47751417 47751563 -47521088 - B3A SINE B2 -34 159 1 8 949 822 118 39 65 chr17 47751591 47751745 -47520906 - B1_Mur4 SINE Alu 0 150 1 8 949 1243 41 0 14 chr17 47751772 47751919 -47520732 - B1_Mus2 SINE Alu -1 146 2 8 949 810 41 0 0 chr17 47751925 47752022 -47520629 - B1_Mm SINE Alu -46 101 5 8 949 467 237 0 95 chr17 47752022 47752051 -47520600 - MT2B LTR ERVL -345 256 143 8 949 792 256 56 27 chr17 47752190 47752390 -47520261 - ID_B1 SINE B4 -5 219 20 8 949 411 283 73 80 chr17 47752406 47752556 -47520095 - RSINE1 SINE B4 0 165 17 8 949 555 286 81 10 chr17 47752666 47752813 -47519838 - B4A SINE B4 -37 255 106 8 949 351 0 0 0 chr17 47752813 47752852 -47519799 + (TG)n Simple_repeat Simple_repeat 1 39 0 8 949 555 286 81 10 chr17 47752852 47752902 -47519749 - B4A SINE B4 -187 105 44 8 949 584 312 12 19 chr17 47753007 47753167 -47519484 - RSINE1 SINE B4 -6 159 1 8 949 361 214 52 12 chr17 47753168 47753265 -47519386 - PB1D7 SINE Alu 0 149 37 8 949 444 242 0 21 chr17 47753409 47753502 -47519149 + RSINE1 SINE B4 31 121 -44 8 949 726 136 79 57 chr17 47753663 47753803 -47518848 + B1_Mus2 SINE Alu 1 143 -4 8 949 381 242 143 57 chr17 47753808 47753948 -47518703 + B4A SINE B4 69 220 -72 8 949 390 242 53 61 chr17 47753948 47754080 -47518571 + Lx8 LINE L1 7282 7412 -61 8 949 1306 61 65 22 chr17 47754087 47754271 -47518380 - B2_Mm2 SINE B2 -1 194 3 8 949 680 218 42 0 chr17 47754490 47754632 -47518019 + B1_Mur1 SINE Alu 1 148 -1 8 949 264 99 24 2 chr17 47754823 47754870 -47517781 + PB1 SINE Alu 71 124 -3 8 949 997 23 148 0 chr17 47755313 47755441 -47517210 + B1_Mm SINE Alu 1 147 0 8 949 219 69 0 0 chr17 47755441 47755470 -47517181 + (A)n Simple_repeat Simple_repeat 1 29 0 8 949 241 291 93 0 chr17 47756191 47756277 -47516374 + YREP_Mm Unknown Unknown 201 294 -1518 8 949 372 260 50 10 chr17 47756201 47756302 -47516349 - ID_B1 SINE B4 -40 184 80 8 949 249 283 21 99 chr17 47756354 47756368 -47516283 - BC1_Mm scRNA scRNA -21 131 119 8 949 180 0 0 0 chr17 47756368 47756388 -47516263 + (TTG)n Simple_repeat Simple_repeat 2 21 0 8 949 249 283 21 99 chr17 47756388 47756415 -47516236 - BC1_Mm scRNA scRNA -34 118 2 8 949 342 263 40 40 chr17 47756415 47756514 -47516137 - ID_B1 SINE B4 -124 100 2 8 949 180 0 0 0 chr17 47756541 47756561 -47516090 + (CAA)n Simple_repeat Simple_repeat 2 21 0 8 949 853 233 38 38 chr17 47756637 47756847 -47515804 - B3 SINE B2 -3 213 4 8 949 410 341 91 0 chr17 47757222 47757354 -47515297 - RSINE1 SINE B4 -3 162 19 8 949 294 327 28 0 chr17 47759527 47759634 -47513017 + PB1D9 SINE Alu 2 111 -9 8 949 240 284 121 40 chr17 47760559 47760658 -47511993 - MLT1J LTR MaLR -72 440 334 8 949 1122 38 45 0 chr17 47761429 47761562 -47511089 - B1_Mm SINE Alu -7 140 2 8 949 522 0 0 0 chr17 47761607 47761665 -47510986 + (TG)n Simple_repeat Simple_repeat 2 59 0 8 949 514 225 124 0 chr17 47761681 47761810 -47510841 - B3A SINE B2 -27 171 27 8 949 1160 75 0 0 chr17 47761818 47761965 -47510686 - B1_Mm SINE Alu 0 147 1 8 949 212 191 0 125 chr17 47761965 47762013 -47510638 - B3A SINE B2 -156 42 1 8 949 235 286 103 13 chr17 47762013 47762091 -47510560 - Tigger8 DNA MER2_type -207 459 375 8 949 555 260 165 6 chr17 47762399 47762569 -47510082 - B4A SINE B4 -95 197 1 8 949 661 257 71 8 chr17 47762655 47762849 -47509802 - B3A SINE B2 -2 214 12 8 949 674 183 15 30 chr17 47762939 47763074 -47509577 + B1_Mur2 SINE Alu 17 149 0 8 949 1032 181 63 3 chr17 47763517 47763715 -47508936 - B3 SINE B2 0 198 3 8 949 353 147 86 38 chr17 47763715 47763800 -47508851 - B1_Mur4 SINE Alu -37 83 2 8 949 380 248 52 60 chr17 47763806 47763922 -47508729 - B1F2 SINE Alu -1 148 34 8 949 249 250 259 0 chr17 47764007 47764119 -47508532 - ID_B1 SINE B4 0 224 84 8 949 1211 74 0 0 chr17 47764149 47764297 -47508354 + B1_Mus1 SINE Alu 1 148 0 8 949 290 287 59 65 chr17 47764521 47764674 -47507977 - RSINE1 SINE B4 -12 153 2 8 949 405 58 0 0 chr17 47764693 47764745 -47507906 + (CA)n Simple_repeat Simple_repeat 2 53 0 8 949 252 288 38 0 chr17 47764771 47764851 -47507800 - RSINE1 SINE B4 -74 91 9 8 949 1154 120 40 0 chr17 47764874 47765049 -47507602 - B2_Mm2 SINE B2 -6 189 8 8 949 272 354 7 51 chr17 47765018 47765155 -47507496 - Charlie1a DNA MER1_type -1284 171 41 8 949 26 64 0 0 chr17 47766581 47766628 -47506023 + GC_rich Low_complexity Low_complexity 1 47 0 8 949 204 248 17 42 chr17 47766756 47766874 -47505777 + (CGG)n Simple_repeat Simple_repeat 2 116 0 8 949 501 17 0 0 chr17 47768394 47768452 -47504199 + (GA)n Simple_repeat Simple_repeat 1 58 0 8 949 726 216 0 0 chr17 47768834 47768959 -47503692 - RSINE1 SINE B4 -36 129 5 8 949 1031 179 5 49 chr17 47769170 47769393 -47503258 - B3 SINE B2 -1 215 3 8 949 796 190 177 11 chr17 47769573 47769754 -47502897 + ID_B1 SINE B4 1 211 -13 8 949 225 0 0 0 chr17 47769755 47769780 -47502871 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 8 949 1365 63 11 0 chr17 47770267 47770442 -47502209 - B2_Mm2 SINE B2 -4 191 15 8 949 211 274 0 19 chr17 47770613 47770665 -47501986 + CT-rich Low_complexity Low_complexity 3 53 0 8 949 597 259 14 7 chr17 47770773 47770921 -47501730 - B1_Mur1 SINE Alu 0 149 1 8 949 540 271 8 0 chr17 47771004 47771133 -47501518 - B1_Mur1 SINE Alu 0 149 20 8 949 270 0 0 0 chr17 47771326 47771356 -47501295 + (TTTTA)n Simple_repeat Simple_repeat 5 34 0 8 949 657 280 90 39 chr17 47771432 47771666 -47500985 - B4A SINE B4 0 292 47 8 949 673 111 0 0 chr17 47771858 47771957 -47500694 - B1_Mus2 SINE Alu -21 126 28 8 949 492 261 69 9 chr17 47772378 47772494 -47500157 + B1F SINE Alu 10 132 -17 9 949 309 244 167 0 chr17 47772616 47772706 -47499945 - PB1D10 SINE Alu -1 116 12 9 949 260 282 167 0 chr17 47772639 47772717 -47499934 - ID_B1 SINE B4 -53 171 81 9 949 1648 31 0 15 chr17 47773036 47773231 -47499420 - B2_Mm1t SINE B2 0 193 2 9 949 972 49 0 0 chr17 47773477 47773599 -47499052 - B1_Mm SINE Alu 0 147 26 9 949 677 256 31 25 chr17 47773773 47773969 -47498682 + B3A SINE B2 1 197 -1 9 949 583 137 193 17 chr17 47773973 47774092 -47498559 + B1_Mur3 SINE Alu 3 142 -7 9 949 306 0 0 0 chr17 47774096 47774130 -47498521 + (CTAA)n Simple_repeat Simple_repeat 3 36 0 9 949 686 270 34 82 chr17 47774134 47774340 -47498311 + B3 SINE B2 16 211 -5 9 949 756 101 49 25 chr17 47774351 47774473 -47498178 + B1F2 SINE Alu 24 148 -1 9 949 573 245 42 7 chr17 47774568 47774712 -47497939 + B1F SINE Alu 1 149 0 9 949 260 311 68 102 chr17 47776726 47776844 -47495807 + B4A SINE B4 43 156 -136 9 949 442 285 25 74 chr17 47776874 47777037 -47495614 + B3A SINE B2 44 198 0 9 949 595 320 48 32 chr17 47777047 47777234 -47495417 + B3A SINE B2 5 194 -4 9 949 1586 169 195 0 chr17 47777251 47777564 -47495087 - ORR1C1 LTR MaLR -4 374 1 9 949 589 277 51 13 chr17 47777647 47777804 -47494847 - RSINE1 SINE B4 -1 164 2 9 949 327 335 163 14 chr17 47778262 47778471 -47494180 + L1M5 LINE L1 5417 5656 -468 9 949 309 345 18 9 chr17 47778505 47778616 -47494035 + PB1D7 SINE Alu 1 112 -8 9 949 506 328 118 16 chr17 47778726 47778971 -47493680 - B4 SINE B4 -6 286 17 9 949 648 155 0 0 chr17 47779251 47779290 -47493361 + polypyrimidine Low_complexity Low_complexity 80 118 0 9 949 1515 28 0 0 chr17 47779290 47779470 -47493181 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 9 949 648 155 0 0 chr17 47779470 47779546 -47493105 + polypyrimidine Low_complexity Low_complexity 4 79 0 9 949 460 226 84 35 chr17 47779581 47779723 -47492928 - B1F SINE Alu 0 149 1 9 949 847 271 39 5 chr17 47779868 47780072 -47492579 + B3 SINE B2 1 211 -5 9 949 1289 51 50 17 chr17 47780072 47780252 -47492399 - B2_Mm2 SINE B2 -9 186 1 9 949 849 171 13 20 chr17 47780399 47780548 -47492103 - B1_Mur2 SINE Alu 0 149 2 9 949 199 0 65 0 chr17 47780578 47780609 -47492042 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 9 949 779 55 156 0 chr17 47780610 47780719 -47491932 - B1_Mus2 SINE Alu -5 142 17 9 949 278 312 93 10 chr17 47780779 47780876 -47491775 - RSINE1 SINE B4 -35 130 26 9 949 274 292 123 0 chr17 47781101 47781207 -47491444 - L1ME5 LINE L1 -291 5903 5785 9 949 204 164 0 68 chr17 47781828 47781887 -47490764 + CT-rich Low_complexity Low_complexity 4 58 0 9 949 237 310 40 40 chr17 47781887 47781961 -47490690 - ID SINE ID -150 74 1 9 949 23 0 0 0 chr17 47782139 47782162 -47490489 + AT_rich Low_complexity Low_complexity 1 23 0 9 949 296 163 19 8 chr17 47782242 47782301 -47490350 - B1_Mm SINE Alu -1 146 90 9 949 408 232 67 9 chr17 47782546 47782666 -47489985 - B1_Mur1 SINE Alu 0 149 24 9 949 313 225 14 27 chr17 47782766 47782839 -47489812 - ID4 SINE ID -2 81 10 9 949 324 0 0 0 chr17 47782935 47782971 -47489680 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 9 949 875 169 7 0 chr17 47782973 47783109 -47489542 - B1_Mur4 SINE Alu -13 137 1 9 949 341 245 131 9 chr17 47783160 47783267 -47489384 - B1F SINE Alu 0 149 30 9 949 315 105 0 0 chr17 47783650 47783707 -47488944 + (TCTG)n Simple_repeat Simple_repeat 2 58 0 9 949 233 315 142 44 chr17 47783715 47783784 -47488867 - B3 SINE B2 -52 164 87 9 949 216 0 0 0 chr17 47783784 47783808 -47488843 + (TCTG)n Simple_repeat Simple_repeat 2 25 0 9 949 233 315 142 44 chr17 47783808 47783851 -47488800 - B3 SINE B2 -130 86 41 9 949 489 267 70 51 chr17 47783819 47783977 -47488674 - B3A SINE B2 -36 162 2 9 949 1289 20 0 0 chr17 47784038 47784185 -47488466 - B1_Mm SINE Alu 0 147 1 9 949 419 217 155 83 chr17 47784185 47784355 -47488296 - B3A SINE B2 -10 185 2 9 949 288 0 0 0 chr17 47784630 47784662 -47487989 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 9 949 321 281 62 55 chr17 47784957 47785085 -47487566 - MIRc SINE MIR -123 145 17 9 949 337 225 56 0 chr17 47785175 47785246 -47487405 - ID4_ SINE ID -4 79 5 9 949 296 240 25 62 chr17 47785272 47785352 -47487299 + ID SINE ID 2 78 -146 9 949 808 105 165 0 chr17 47787363 47787496 -47485155 - URR1B DNA MER1_type 0 225 71 9 949 533 319 85 24 chr17 47787665 47787912 -47484739 + Charlie1b DNA MER1_type 15 276 -247 9 949 189 214 0 0 chr17 47788165 47788207 -47484444 + (TG)n Simple_repeat Simple_repeat 1 42 0 9 949 221 277 0 0 chr17 47788217 47788264 -47484387 - PB1D10 SINE Alu -16 101 55 9 949 655 196 19 95 chr17 47789111 47789269 -47483382 + B1_Mur3 SINE Alu 3 148 -1 9 949 504 0 0 0 chr17 47789283 47789339 -47483312 + (GA)n Simple_repeat Simple_repeat 1 56 0 9 949 226 241 0 18 chr17 47789390 47789445 -47483206 + MTC LTR MaLR 1 54 -367 9 949 264 293 53 0 chr17 47789506 47789581 -47483070 + ID4_ SINE ID 1 79 -4 9 949 182 37 37 0 chr17 47789767 47789794 -47482857 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 9 949 250 114 99 25 chr17 47789817 47789898 -47482753 - Lx3_Mus LINE L1 -908 6101 6015 9 949 831 97 0 0 chr17 47789898 47790011 -47482640 + Lx3_Mus LINE L1 5925 6037 -972 9 949 523 197 101 17 chr17 47790012 47790131 -47482520 - B1_Mur2 SINE Alu 0 149 21 9 949 391 78 4 0 chr17 47790364 47790419 -47482232 - B1_Mur3 SINE Alu -8 141 53 9 949 654 222 16 8 chr17 47790447 47790574 -47482077 + RSINE1 SINE B4 4 131 -34 9 949 354 61 0 0 chr17 47790580 47790629 -47482022 + (CA)n Simple_repeat Simple_repeat 1 49 0 9 949 651 170 314 0 chr17 47790925 47791084 -47481567 + B3 SINE B2 2 210 -6 9 949 1189 41 0 7 chr17 47791528 47791676 -47480975 + B1_Mm SINE Alu 1 147 0 9 949 185 217 70 28 chr17 47792188 47792259 -47480392 - MIR SINE MIR -6 256 183 9 949 282 56 0 0 chr17 47792552 47792588 -47480063 + (CTG)n Simple_repeat Simple_repeat 3 38 0 9 949 638 239 80 0 chr17 47792606 47792744 -47479907 - B1_Mur2 SINE Alu 0 149 1 9 949 499 283 90 0 chr17 47792773 47792918 -47479733 - RSINE1 SINE B4 -4 161 4 9 949 647 35 0 44 chr17 47793247 47793338 -47479313 + B2_Mm1t SINE B2 101 187 -6 9 949 505 263 249 4 chr17 47793596 47793825 -47478826 - B4A SINE B4 -5 287 3 9 949 364 273 104 32 chr17 47793830 47793955 -47478696 - B1_Mur3 SINE Alu -15 134 1 9 949 712 220 24 77 chr17 47794108 47794315 -47478336 + B3A SINE B2 3 198 0 9 949 1143 36 0 0 chr17 47794459 47794598 -47478053 - B1_Mus2 SINE Alu 0 147 9 9 949 386 208 0 72 chr17 47794600 47794683 -47477968 + RSINE1 SINE B4 89 165 0 9 949 665 278 52 38 chr17 47794691 47794904 -47477747 + B4A SINE B4 71 286 -6 9 949 225 0 0 0 chr17 47794934 47794959 -47477692 + (T)n Simple_repeat Simple_repeat 1 25 0 9 949 227 103 0 25 chr17 47795186 47795226 -47477425 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 9 949 433 68 0 0 chr17 47795227 47795286 -47477365 - B1_Mur4 SINE Alu 0 150 92 9 949 296 229 11 46 chr17 47795286 47795314 -47477337 - ID_B1 SINE B4 0 224 141 9 949 275 229 204 20 chr17 47795443 47795541 -47477110 - PB1D10 SINE Alu 0 117 2 9 949 660 178 123 8 chr17 47796390 47796520 -47476131 + B3 SINE B2 1 145 -71 9 949 184 29 114 0 chr17 47796520 47796555 -47476096 + (CATG)n Simple_repeat Simple_repeat 4 42 0 9 949 503 232 131 82 chr17 47796555 47796607 -47476044 + B2_Mm2 SINE B2 141 191 -4 9 949 206 225 0 0 chr17 47797040 47797080 -47475571 + (TCCA)n Simple_repeat Simple_repeat 2 41 0 9 949 825 110 87 0 chr17 47797199 47797326 -47475325 - B1_Mur2 SINE Alu -3 146 9 9 949 742 257 6 26 chr17 47797357 47797513 -47475138 - B3 SINE B2 -57 159 7 9 949 1488 170 133 84 chr17 47797564 47797969 -47474682 - Lx9 LINE L1 -94 7550 7126 9 949 714 199 10 16 chr17 47798012 47798151 -47474500 - B1_Mur4 SINE Alu 0 150 1 9 949 213 253 112 22 chr17 47798187 47798262 -47474389 + MIRc SINE MIR 73 155 -113 9 949 264 310 182 23 chr17 47798262 47798394 -47474257 + RSINE1 SINE B4 1 153 -12 9 949 213 253 112 22 chr17 47798394 47798407 -47474244 + MIRc SINE MIR 156 168 -100 9 949 286 331 180 44 chr17 47798645 47798917 -47473734 - MamRep605 Unknown Unknown -62 814 506 9 949 1154 153 21 0 chr17 47799292 47799481 -47473170 - RMER6A LTR ERVK -4 752 560 9 949 292 323 10 40 chr17 47799556 47799656 -47472995 + PB1D10 SINE Alu 1 97 -20 9 949 1572 47 0 40 chr17 47799923 47800124 -47472527 - B2_Mm1t SINE B2 0 193 1 9 949 209 57 0 28 chr17 47800344 47800380 -47472271 + (TTTTG)n Simple_repeat Simple_repeat 3 37 0 9 949 1296 87 11 16 chr17 47800842 47801030 -47471621 - B2_Mm1a SINE B2 -6 187 1 9 949 2071 162 61 33 chr17 47801840 47802236 -47470415 - MTB_Mm LTR MaLR 0 407 1 9 949 673 216 37 0 chr17 47802249 47802383 -47470268 - B3A SINE B2 -59 139 1 9 949 653 149 17 42 chr17 47802622 47802741 -47469910 - PB1D9 SINE Alu -3 117 2 9 949 469 222 301 12 chr17 47802846 47803019 -47469632 - ID_B1 SINE B4 0 224 2 1 949 504 202 62 27 chr17 47803559 47803671 -47468980 + PB1D10 SINE Alu 2 117 0 1 949 664 119 20 0 chr17 47803671 47803772 -47468879 - MTB_Mm LTR MaLR -304 103 1 1 949 231 250 0 0 chr17 47803773 47803817 -47468834 - B4A SINE B4 -243 49 6 1 949 463 314 73 0 chr17 47803826 47803963 -47468688 + RSINE1 SINE B4 2 148 -17 1 949 509 306 111 76 chr17 47804012 47804274 -47468377 + B4 SINE B4 2 272 -20 1 949 454 308 41 16 chr17 47804379 47804501 -47468150 + RSINE1 SINE B4 3 127 -38 1 949 268 300 24 24 chr17 47804623 47804705 -47467946 - ID4_ SINE ID 0 83 2 1 949 794 61 174 0 chr17 47804736 47804851 -47467800 - B1_Mm SINE Alu -12 135 1 1 949 1013 175 35 116 chr17 47804885 47805143 -47467508 - ORR1D1 LTR MaLR -3 371 135 1 949 659 131 345 0 chr17 47805167 47805185 -47467466 - B2_Mm2 SINE B2 0 195 178 1 949 195 42 0 0 chr17 47805185 47805209 -47467442 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1 949 659 131 345 0 chr17 47805209 47805335 -47467316 - B2_Mm2 SINE B2 -18 177 3 1 949 378 0 0 0 chr17 47805606 47805648 -47467003 + (CCTG)n Simple_repeat Simple_repeat 1 42 0 1 949 629 200 0 0 chr17 47805668 47805778 -47466873 - B1F SINE Alu -37 112 3 1 949 287 315 34 51 chr17 47805675 47805792 -47466859 - B4A SINE B4 -98 194 80 1 949 399 211 203 39 chr17 47805834 47805962 -47466689 - B1_Mur2 SINE Alu 0 149 1 1 949 1283 108 0 16 chr17 47806026 47806214 -47466437 + B2_Mm2 SINE B2 2 186 -9 1 949 233 245 126 117 chr17 47806218 47806329 -47466322 - MER3 DNA MER1_type -80 129 18 1 949 591 239 15 15 chr17 47806358 47806494 -47466157 + B1_Mur1 SINE Alu 1 136 -13 1 949 489 76 0 0 chr17 47807340 47807406 -47465245 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 1 949 441 0 0 0 chr17 47807410 47807459 -47465192 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 949 225 353 0 0 chr17 47807545 47807613 -47465038 - RSINE1 SINE B4 -68 97 30 1 949 601 256 60 25 chr17 47807685 47807885 -47464766 + B3 SINE B2 3 209 -7 1 949 483 222 17 61 chr17 47807885 47808000 -47464651 + PB1D9 SINE Alu 3 112 -8 1 949 737 185 13 27 chr17 47808177 47808327 -47464324 + B1F2 SINE Alu 2 149 0 1 949 320 273 14 0 chr17 47808361 47808448 -47464203 + PB1D7 SINE Alu 27 114 -35 1 949 504 0 0 0 chr17 47808769 47808825 -47463826 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 949 374 200 222 0 chr17 47810675 47810765 -47461886 - ID_B1 SINE B4 -13 211 102 1 949 385 241 74 41 chr17 47811103 47811224 -47461427 + B1F1 SINE Alu 12 136 -13 1 949 300 149 54 0 chr17 47811224 47811298 -47461353 + GA-rich Low_complexity Low_complexity 1 78 0 1 949 456 245 9 38 chr17 47812030 47812136 -47460515 + RSINE1 SINE B4 3 105 -60 1 949 1121 109 0 0 chr17 47812211 47812358 -47460293 + B1_Mus1 SINE Alu 2 148 0 1 949 776 285 37 14 chr17 47812619 47812836 -47459815 + B4 SINE B4 2 223 -69 1 949 413 226 359 8 chr17 47812848 47812982 -47459669 - B3 SINE B2 -34 182 2 1 949 758 133 19 106 chr17 47813159 47813319 -47459332 - B1_Mur3 SINE Alu -2 147 2 1 949 763 147 72 14 chr17 47814210 47814348 -47458303 + B1_Mus1 SINE Alu 3 148 0 1 949 1261 48 0 0 chr17 47814351 47814497 -47458154 + B1_Mus2 SINE Alu 2 147 0 1 949 970 212 159 21 chr17 47814587 47814914 -47457737 - MTD LTR MaLR 0 419 48 1 949 653 190 9 0 chr17 47816320 47816436 -47456215 - B1_Mur4 SINE Alu -33 117 1 1 949 429 219 114 0 chr17 47819503 47819608 -47453043 + PB1D10 SINE Alu 1 117 0 1 949 270 0 0 0 chr17 47820022 47820052 -47452599 + (CAGGG)n Simple_repeat Simple_repeat 2 31 0 1 949 239 156 141 0 chr17 47821886 47821950 -47450701 + ID4 SINE ID 4 76 -7 1 949 492 168 207 16 chr17 47822334 47822455 -47450196 - B1_Mur1 SINE Alu 0 149 6 1 949 713 277 24 77 chr17 47822599 47822806 -47449845 + ID_B1 SINE B4 3 198 -26 1 949 460 228 22 109 chr17 47824525 47824663 -47447988 - RSINE1 SINE B4 0 165 40 1 949 182 37 0 36 chr17 47825414 47825442 -47447209 + (CACCC)n Simple_repeat Simple_repeat 3 29 0 1 949 324 102 0 0 chr17 47826457 47826506 -47446145 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 1 949 189 278 31 62 chr17 47826576 47826672 -47445979 - MIRc SINE MIR -145 123 31 1 949 312 279 151 38 chr17 47828039 47828251 -47444400 - MIRc SINE MIR -16 252 17 1 949 263 256 161 11 chr17 47828752 47828839 -47443812 + PB1D10 SINE Alu 9 108 -9 1 949 482 226 119 33 chr17 47828852 47829003 -47443648 + RSINE1 SINE B4 2 165 0 1 949 511 211 85 8 chr17 47829036 47829165 -47443486 - B1_Mur1 SINE Alu -10 139 1 1 949 486 289 103 6 chr17 47829471 47829645 -47443006 - MIRb SINE MIR -13 255 65 1 949 926 152 70 35 chr17 47830052 47830223 -47442428 - B2_Mm2 SINE B2 -10 185 9 1 949 550 205 45 0 chr17 47830225 47830337 -47442314 - PB1D10 SINE Alu 0 117 1 1 949 234 0 0 0 chr17 47830924 47830950 -47441701 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 949 23 0 0 0 chr17 47831713 47831736 -47440915 + GC_rich Low_complexity Low_complexity 1 23 0 1 949 259 230 0 80 chr17 47832110 47832247 -47440404 + (CGGGG)n Simple_repeat Simple_repeat 1 126 0 1 949 1479 73 0 10 chr17 47833203 47833397 -47439254 - B2_Mm2 SINE B2 -2 193 2 1 949 517 173 116 80 chr17 47833716 47833854 -47438797 - B1_Mus2 SINE Alu 0 147 5 1 949 277 282 0 0 chr17 47834487 47834558 -47438093 + BC1_Mm scRNA scRNA 25 95 -57 1 949 214 255 0 0 chr17 47834876 47834923 -47437728 + PB1D9 SINE Alu 29 75 -45 1 949 750 23 0 0 chr17 47835780 47835868 -47436783 + (TC)n Simple_repeat Simple_repeat 1 88 0 1 949 254 179 18 0 chr17 47837561 47837617 -47435034 + CT-rich Low_complexity Low_complexity 1 57 0 1 949 348 201 51 15 chr17 47837630 47837728 -47434923 - B1F1 SINE Alu -11 109 9 1 949 255 274 47 12 chr17 47837655 47837740 -47434911 - B4A SINE B4 -123 169 82 1 949 243 265 0 0 chr17 47837895 47837944 -47434707 - ID4_ SINE ID -6 77 29 1 949 270 136 0 0 chr17 47837944 47837988 -47434663 + (CATA)n Simple_repeat Simple_repeat 2 45 0 1 949 252 231 0 0 chr17 47837990 47838042 -47434609 - PB1D10 SINE Alu -3 114 63 1 949 235 246 0 47 chr17 47837994 47838058 -47434593 - ID_B1 SINE B4 -7 217 157 1 949 208 158 26 0 chr17 47841046 47841084 -47431567 + (TCTG)n Simple_repeat Simple_repeat 4 42 0 1 949 201 257 14 0 chr17 47841150 47841224 -47431427 + (TTTA)n Simple_repeat Simple_repeat 2 76 0 1 950 301 0 0 0 chr17 47841381 47841417 -47431234 + U2 snRNA snRNA 1 36 -152 1 950 235 271 0 17 chr17 47842497 47842557 -47430094 + CT-rich Low_complexity Low_complexity 1 59 0 1 950 464 246 118 8 chr17 47842847 47842966 -47429685 + B1_Mur2 SINE Alu 10 141 -8 1 950 192 268 134 0 chr17 47843653 47843735 -47428916 - MIRc SINE MIR -103 165 73 1 950 930 281 110 23 chr17 47844236 47844582 -47428069 - MTEa LTR MaLR -1 378 3 1 950 536 272 58 17 chr17 47844582 47844754 -47427897 + B3A SINE B2 2 180 -18 1 950 362 288 47 52 chr17 47844893 47845065 -47427586 + MIRb SINE MIR 86 256 -12 1 950 734 289 50 70 chr17 47846500 47846715 -47425936 + B4A SINE B4 1 216 -76 1 950 1230 48 0 7 chr17 47846715 47846863 -47425788 + B1_Mus2 SINE Alu 1 147 0 1 950 734 289 50 70 chr17 47846863 47846945 -47425706 + B4A SINE B4 217 292 0 1 950 468 62 0 0 chr17 47846998 47847062 -47425589 + (GA)n Simple_repeat Simple_repeat 2 65 0 1 950 217 333 40 90 chr17 47847410 47847611 -47425040 - L2b LINE L2 -6 3369 3179 1 950 484 293 21 28 chr17 47847909 47848053 -47424598 + MLT1A0 LTR MaLR 1 143 -222 1 950 778 136 29 23 chr17 47849679 47849852 -47422799 + G-rich Low_complexity Low_complexity 6 179 0 1 950 215 103 0 0 chr17 47849852 47849881 -47422770 + (GA)n Simple_repeat Simple_repeat 2 30 0 1 950 204 135 0 0 chr17 47849881 47849918 -47422733 + (CG)n Simple_repeat Simple_repeat 2 38 0 1 950 351 0 0 0 chr17 47849927 47849966 -47422685 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 950 1482 211 62 36 chr17 47850343 47850799 -47421852 + RLTR11A2 LTR ERVK 1 522 -5 1 950 644 279 58 16 chr17 47850850 47851039 -47421612 + B3A SINE B2 2 198 0 1 950 180 0 0 0 chr17 47851071 47851091 -47421560 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 1 950 271 270 9 48 chr17 47851221 47851326 -47421325 + RLTR25B LTR ERVK 402 502 -526 1 950 682 103 9 0 chr17 47851262 47851369 -47421282 + B1_Mus2 SINE Alu 40 147 0 1 950 1197 55 14 0 chr17 47851401 47851546 -47421105 + B1_Mm SINE Alu 1 147 0 1 950 203 106 43 0 chr17 47851548 47851595 -47421056 + (CAAAAA)n Simple_repeat Simple_repeat 4 52 0 1 950 570 282 136 0 chr17 47851611 47851788 -47420863 + ID_B1 SINE B4 4 204 -20 1 950 456 19 0 0 chr17 47851788 47851841 -47420810 + (GA)n Simple_repeat Simple_repeat 1 53 0 1 950 2019 122 164 19 chr17 47852715 47852791 -47419860 + MTC LTR MaLR 2 80 -341 1 950 201 74 0 0 chr17 47852791 47852818 -47419833 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 950 2019 122 164 19 chr17 47852818 47853108 -47419543 + MTC LTR MaLR 81 420 -1 1 950 235 170 189 0 chr17 47853197 47853250 -47419401 - ID_B1 SINE B4 -7 217 155 1 950 269 292 0 15 chr17 47853566 47853632 -47419019 + C-rich Low_complexity Low_complexity 2 66 0 1 950 253 312 31 20 chr17 47853836 47853934 -47418717 - MIRb SINE MIR -134 134 36 1 950 351 150 0 0 chr17 47853944 47854004 -47418647 + (TTA)n Simple_repeat Simple_repeat 1 60 0 1 950 180 0 0 0 chr17 47854045 47854065 -47418586 + (TCC)n Simple_repeat Simple_repeat 3 22 0 1 950 826 146 27 34 chr17 47854081 47854230 -47418421 - B1_Mur3 SINE Alu -1 148 1 1 950 243 289 241 60 chr17 47854234 47854400 -47418251 - B3A SINE B2 0 198 3 1 950 225 196 0 0 chr17 47854402 47854448 -47418203 + (CACCAT)n Simple_repeat Simple_repeat 5 50 0 1 950 466 206 29 29 chr17 47854449 47854554 -47418097 - B1F SINE Alu -10 139 35 1 950 321 26 0 0 chr17 47854586 47854624 -47418027 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 950 485 238 9 28 chr17 47854658 47854766 -47417885 + RSINE1 SINE B4 48 153 -12 1 950 976 40 33 39 chr17 47854779 47854960 -47417691 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 950 250 82 61 0 chr17 47855624 47855673 -47416978 + (TTCCC)n Simple_repeat Simple_repeat 5 56 0 1 950 509 275 43 176 chr17 47855874 47855981 -47416670 - ID_B1 SINE B4 0 224 156 1 950 1250 48 0 0 chr17 47855981 47856127 -47416524 - B1_Mus2 SINE Alu 0 147 2 1 950 509 275 43 176 chr17 47856127 47856275 -47416376 - ID_B1 SINE B4 -69 155 3 1 950 517 223 0 0 chr17 47856886 47856989 -47415662 + PB1D10 SINE Alu 1 103 -14 1 950 202 195 0 0 chr17 47857109 47857150 -47415501 + G-rich Low_complexity Low_complexity 1 41 0 1 950 392 316 15 7 chr17 47857488 47857625 -47415026 + L1MC4a LINE L1 7088 7225 -657 1 950 961 150 0 7 chr17 47857625 47857773 -47414878 + B1F2 SINE Alu 1 147 -2 1 950 312 253 12 12 chr17 47857825 47857909 -47414742 + PB1D9 SINE Alu 21 104 -16 1 950 181 384 50 20 chr17 47858085 47858186 -47414465 - L3 LINE CR1 -46 4443 4340 1 950 23 54 0 0 chr17 47858482 47858519 -47414132 + AT_rich Low_complexity Low_complexity 1 37 0 1 950 296 259 24 12 chr17 47858522 47858604 -47414047 - ID4_ SINE ID 0 83 1 1 950 1259 34 7 0 chr17 47858692 47858838 -47413813 - B1_Mus2 SINE Alu 0 147 1 1 950 395 339 0 78 chr17 47858893 47859034 -47413617 - RSINE1 SINE B4 -12 153 24 1 950 463 231 170 128 chr17 47859115 47859263 -47413388 + B4A SINE B4 50 219 -73 1 950 631 236 49 84 chr17 47859263 47859466 -47413185 + B3A SINE B2 3 198 0 1 950 463 231 170 128 chr17 47859466 47859535 -47413116 + B4A SINE B4 220 276 -16 1 950 525 88 0 0 chr17 47859551 47859631 -47413020 + (CA)n Simple_repeat Simple_repeat 1 80 0 1 950 378 72 51 43 chr17 47859701 47859818 -47412833 + (TATAA)n Simple_repeat Simple_repeat 2 119 0 1 950 467 222 0 77 chr17 47859905 47860022 -47412629 - PB1D9 SINE Alu -12 108 1 1 950 645 289 6 0 chr17 47860535 47860691 -47411960 + RSINE1 SINE B4 7 163 -2 1 950 306 73 0 0 chr17 47860704 47860745 -47411906 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 1 950 1168 82 0 0 chr17 47860767 47860913 -47411738 - B1_Mm SINE Alu 0 147 2 1 950 365 271 32 65 chr17 47862026 47862180 -47410471 + B1F SINE Alu 1 149 0 1 950 539 306 0 20 chr17 47862185 47862335 -47410316 + B1F1 SINE Alu 3 149 0 1 950 466 359 30 30 chr17 47862345 47862540 -47410111 + B4A SINE B4 36 230 -62 1 950 444 177 115 0 chr17 47862540 47862636 -47410015 + RSINE1 SINE B4 2 108 -57 1 950 266 280 0 39 chr17 47862691 47862769 -47409882 + B4A SINE B4 212 286 -6 1 950 489 277 34 83 chr17 47863238 47863443 -47409208 + MER20 DNA MER1_type 22 216 -3 1 950 479 220 101 8 chr17 47863978 47864097 -47408554 - B3 SINE B2 -86 130 1 1 950 234 213 223 0 chr17 47864101 47864195 -47408456 + MER2 DNA MER2_type 181 295 -50 1 950 231 36 0 0 chr17 47864230 47864258 -47408393 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 950 559 293 13 0 chr17 47864272 47864422 -47408229 - RSINE1 SINE B4 -13 152 1 1 950 735 247 168 0 chr17 47864929 47865119 -47407532 + ID_B1 SINE B4 2 223 -1 1 950 1228 27 0 20 chr17 47865205 47865354 -47407297 + B1_Mm SINE Alu 1 146 -1 1 950 206 347 17 17 chr17 47865468 47865647 -47407004 + GA-rich Low_complexity Low_complexity 2 180 0 1 950 710 234 0 27 chr17 47867944 47868093 -47404558 - RSINE1 SINE B4 -18 147 3 1 950 874 136 6 6 chr17 47868451 47868607 -47404044 + (TTTC)n Simple_repeat Simple_repeat 4 159 0 1 950 519 168 0 0 chr17 47868584 47868679 -47403972 + CT-rich Low_complexity Low_complexity 4 98 0 1 950 1139 66 0 0 chr17 47871709 47871845 -47400806 + B1_Mus2 SINE Alu 2 137 -10 1 950 254 103 62 25 chr17 47872326 47872406 -47400245 + GA-rich Low_complexity Low_complexity 1 83 0 1 950 484 303 20 14 chr17 47872806 47872953 -47399698 + B1_Mur1 SINE Alu 1 148 -1 1 950 198 0 0 0 chr17 47873310 47873332 -47399319 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 950 723 221 50 0 chr17 47873335 47873475 -47399176 + B1_Mur4 SINE Alu 1 147 -3 1 950 21 57 0 0 chr17 47873475 47873510 -47399141 + AT_rich Low_complexity Low_complexity 1 35 0 1 950 21 0 0 0 chr17 47873541 47873562 -47399089 + AT_rich Low_complexity Low_complexity 1 21 0 1 950 23 0 0 0 chr17 47875382 47875405 -47397246 + GC_rich Low_complexity Low_complexity 1 23 0 1 950 218 385 27 9 chr17 47877143 47877253 -47395398 - MIR SINE MIR -138 124 13 1 950 723 231 32 21 chr17 47877285 47877475 -47395176 - B3A SINE B2 0 198 7 1 950 717 209 27 53 chr17 47877508 47877695 -47394956 + B3 SINE B2 35 216 0 1 950 263 292 50 40 chr17 47878324 47878424 -47394227 + MIR SINE MIR 28 128 -134 1 950 946 234 5 5 chr17 47878636 47878834 -47393817 + ID_B1 SINE B4 26 223 -1 1 950 622 248 60 7 chr17 47878843 47878993 -47393658 + B3A SINE B2 2 159 -39 1 950 1461 55 16 11 chr17 47879055 47879237 -47393414 + B2_Mm2 SINE B2 2 184 -11 1 950 964 238 50 43 chr17 47879350 47879631 -47393020 + Lx6 LINE L1 7042 7324 -136 1 950 632 154 315 0 chr17 47879649 47879811 -47392840 - B3 SINE B2 -2 214 2 1 950 207 297 0 15 chr17 47879835 47879900 -47392751 + G-rich Low_complexity Low_complexity 2 65 0 1 950 647 195 131 24 chr17 47880019 47880187 -47392464 + B3 SINE B2 25 210 -6 1 950 261 0 0 0 chr17 47880589 47880618 -47392033 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 950 973 23 148 0 chr17 47880975 47881103 -47391548 - B1_Mus1 SINE Alu 0 148 2 1 950 438 172 0 0 chr17 47881415 47881514 -47391137 + (TG)n Simple_repeat Simple_repeat 2 100 0 1 950 780 268 95 9 chr17 47881518 47881740 -47390911 - B4 SINE B4 -1 291 51 1 950 754 265 5 36 chr17 47881812 47882004 -47390647 - B3A SINE B2 -11 187 2 1 950 1150 157 40 10 chr17 47882052 47882252 -47390399 - B3 SINE B2 -10 206 1 1 950 22 56 0 0 chr17 47882263 47882299 -47390352 + AT_rich Low_complexity Low_complexity 1 36 0 1 950 1445 79 21 5 chr17 47882299 47882490 -47390161 - B2_Mm2 SINE B2 -1 194 1 1 950 276 177 247 25 chr17 47882492 47882573 -47390078 - PB1D10 SINE Alu 0 117 19 1 950 416 244 0 8 chr17 47882902 47883030 -47389621 + (TG)n Simple_repeat Simple_repeat 1 127 0 1 950 727 168 5 32 chr17 47883034 47883219 -47389432 + (TATG)n Simple_repeat Simple_repeat 1 180 0 1 950 362 300 63 190 chr17 47883227 47883306 -47389345 - B4 SINE B4 -1 291 218 1 950 211 0 57 29 chr17 47883314 47883349 -47389302 + (TTTTG)n Simple_repeat Simple_repeat 4 39 0 1 950 691 120 91 70 chr17 47883349 47883483 -47389168 - B1_Mur4 SINE Alu -9 141 3 1 950 264 328 25 33 chr17 47883488 47883608 -47389043 - PB1D9 SINE Alu 0 120 2 1 950 1568 52 5 0 chr17 47883609 47883800 -47388851 - B2_Mm1a SINE B2 -1 192 1 1 950 362 300 63 190 chr17 47883800 47883854 -47388797 - B4 SINE B4 -199 93 44 1 950 761 174 43 0 chr17 47884125 47884263 -47388388 - B1_Mur3 SINE Alu 0 149 6 1 950 1073 75 0 42 chr17 47884438 47884605 -47388046 + B2_Mm2 SINE B2 36 195 0 1 950 648 268 6 37 chr17 47884749 47884769 -47387882 - RSINE1 SINE B4 -4 161 143 1 950 180 77 0 0 chr17 47884769 47884795 -47387856 + (CGTG)n Simple_repeat Simple_repeat 1 26 0 1 950 648 268 6 37 chr17 47884795 47884937 -47387714 - RSINE1 SINE B4 -23 142 4 1 950 410 329 7 20 chr17 47884949 47885098 -47387553 - ID_B1 SINE B4 0 224 78 1 950 383 192 16 175 chr17 47885109 47885235 -47387416 - PB1D10 SINE Alu -1 116 11 1 950 183 80 0 0 chr17 47885321 47885346 -47387305 + (GGA)n Simple_repeat Simple_repeat 1 25 0 1 950 207 100 0 0 chr17 47886600 47886630 -47386021 + (TC)n Simple_repeat Simple_repeat 1 30 0 1 950 255 163 0 0 chr17 47887011 47887060 -47385591 + Charlie7a DNA MER1_type 59 107 -165 1 950 454 229 40 63 chr17 47887139 47887265 -47385386 + RSINE1 SINE B4 3 125 -40 1 950 900 182 25 65 chr17 47887334 47887534 -47385117 + B3A SINE B2 2 193 -5 1 950 422 203 11 60 chr17 47887619 47887719 -47384932 + B1_Mur4 SINE Alu 1 94 -55 1 950 1018 130 0 7 chr17 47887814 47887961 -47384690 - B1_Mus1 SINE Alu 0 148 3 1 950 681 125 19 0 chr17 47888035 47888139 -47384512 - B3 SINE B2 -109 107 2 1 950 796 222 19 58 chr17 47888141 47888347 -47384304 - B3A SINE B2 0 198 1 1 950 900 206 21 1 chr17 47888888 47889080 -47383571 - B3 SINE B2 0 198 1 1 950 512 269 92 12 chr17 47889198 47889371 -47383280 + B3A SINE B2 5 191 -7 1 950 317 276 150 0 chr17 47889437 47889564 -47383087 + MER2 DNA MER2_type 192 337 -8 1 950 289 335 11 4 chr17 47889865 47889980 -47382671 + MIR SINE MIR 79 196 -72 1 950 752 129 98 17 chr17 47890623 47890779 -47381872 + B3 SINE B2 2 176 -19 1 950 252 59 0 0 chr17 47890779 47890813 -47381838 + (CAGAGA)n Simple_repeat Simple_repeat 2 35 0 1 950 761 143 105 0 chr17 47890822 47890955 -47381696 + B1_Mur3 SINE Alu 2 148 -1 1 950 580 160 137 71 chr17 47890955 47890970 -47381681 + B2_Mm2 SINE B2 182 195 0 1 950 213 39 0 0 chr17 47891230 47891256 -47381395 + (G)n Simple_repeat Simple_repeat 1 26 0 1 950 572 301 51 20 chr17 47891781 47891978 -47380673 + MIR SINE MIR 44 246 -16 1 950 999 131 223 0 chr17 47892414 47892589 -47380062 - B3 SINE B2 0 216 3 1 950 922 171 7 0 chr17 47892611 47892757 -47379894 + B1_Mus1 SINE Alu 1 147 -1 1 950 542 273 43 43 chr17 47892784 47892968 -47379683 - B3A SINE B2 -12 186 3 1 950 563 331 16 5 chr17 47892994 47893179 -47379472 + B4A SINE B4 1 187 -105 1 950 459 0 0 0 chr17 47893179 47893230 -47379421 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 950 513 0 0 0 chr17 47893230 47893286 -47379365 + (GA)n Simple_repeat Simple_repeat 2 58 0 1 950 192 258 32 16 chr17 47894037 47894100 -47378551 + MIRb SINE MIR 102 165 -103 1 950 399 204 20 0 chr17 47894927 47895025 -47377626 + L1MA7 LINE L1 6162 6261 -30 1 950 621 185 219 12 chr17 47895035 47895199 -47377452 - B3A SINE B2 0 198 1 1 950 500 215 28 0 chr17 47895228 47895335 -47377316 + PB1D9 SINE Alu 11 120 0 1 950 457 249 134 56 chr17 47895520 47895788 -47376863 - B4A SINE B4 -1 291 3 1 950 449 239 0 6 chr17 47898485 47898666 -47373985 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 950 407 254 0 22 chr17 47898679 47898860 -47373791 + (CA)n Simple_repeat Simple_repeat 2 178 0 1 950 582 185 0 0 chr17 47898891 47899026 -47373625 + (CA)n Simple_repeat Simple_repeat 2 136 0 1 950 805 235 86 5 chr17 47901341 47901505 -47371146 + B3 SINE B2 1 168 -48 1 950 192 125 0 0 chr17 47901505 47901537 -47371114 + (CATG)n Simple_repeat Simple_repeat 1 32 0 1 950 805 235 86 5 chr17 47901537 47901569 -47371082 + B3 SINE B2 169 212 -4 1 950 211 204 0 0 chr17 47901607 47901656 -47370995 + (CAT)n Simple_repeat Simple_repeat 3 51 0 1 950 570 98 0 0 chr17 47901656 47901738 -47370913 + (TCC)n Simple_repeat Simple_repeat 1 82 0 1 950 1110 96 36 0 chr17 47901738 47901904 -47370747 - B2_Mm2 SINE B2 -23 172 1 1 950 491 221 61 17 chr17 47902076 47902191 -47370460 + RSINE1 SINE B4 44 163 -2 1 950 429 247 24 0 chr17 47902284 47902454 -47370197 + (TCCA)n Simple_repeat Simple_repeat 4 177 0 1 950 230 384 113 0 chr17 47902512 47902697 -47369954 - MIRb SINE MIR -16 252 47 1 950 207 0 0 0 chr17 47902724 47902747 -47369904 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 950 268 312 35 9 chr17 47903264 47903377 -47369274 - LTR16C LTR ERVL -32 457 342 1 950 357 107 95 0 chr17 47903966 47904054 -47368597 - B1_Mus2 SINE Alu -1 146 10 1 950 845 276 10 0 chr17 47904424 47904623 -47368028 + ID_B1 SINE B4 3 203 -21 1 950 381 111 0 66 chr17 47904665 47904771 -47367880 + (CGGGG)n Simple_repeat Simple_repeat 1 99 0 1 950 693 152 14 18 chr17 47907435 47907663 -47364988 + (TG)n Simple_repeat Simple_repeat 1 226 0 1 950 469 282 0 0 chr17 47907674 47907784 -47364867 - ID_B1 SINE B4 -10 214 105 1 950 345 313 12 51 chr17 47907878 47908073 -47364578 - MIRb SINE MIR -76 186 6 1 950 332 224 106 58 chr17 47908341 47908445 -47364206 + MIR SINE MIR 84 192 -70 1 950 195 303 30 15 chr17 47909219 47909286 -47363365 - MIRc SINE MIR -120 148 81 1 950 215 150 0 24 chr17 47910421 47910462 -47362189 + (CAGAGA)n Simple_repeat Simple_repeat 2 41 0 1 950 320 263 13 0 chr17 47910926 47911002 -47361649 + ID4 SINE ID 3 79 -4 1 950 780 263 84 30 chr17 47911011 47911274 -47361377 + B4A SINE B4 2 278 -14 1 950 232 214 43 0 chr17 47911287 47911357 -47361294 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 950 556 134 30 7 chr17 47911368 47911503 -47361148 + (CA)n Simple_repeat Simple_repeat 1 138 0 1 950 22 35 0 0 chr17 47911927 47911956 -47360695 + AT_rich Low_complexity Low_complexity 1 29 0 1 950 456 314 8 0 chr17 47911961 47912085 -47360566 - RSINE1 SINE B4 -39 126 2 1 950 432 244 42 62 chr17 47912136 47912280 -47360371 + B3A SINE B2 73 213 -3 1 950 724 213 129 31 chr17 47912283 47912477 -47360174 + B3 SINE B2 1 213 -3 1 950 706 272 149 25 chr17 47912849 47913090 -47359561 + B4A SINE B4 15 285 -7 1 950 255 269 0 0 chr17 47913120 47913239 -47359412 + (CA)n Simple_repeat Simple_repeat 2 120 0 1 950 180 0 0 0 chr17 47913255 47913275 -47359376 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 950 183 224 31 94 chr17 47913430 47913494 -47359157 - MIRc SINE MIR -181 87 28 1 950 394 271 28 18 chr17 47913606 47913715 -47358936 - PB1D10 SINE Alu -7 110 1 1 950 550 243 20 14 chr17 47913715 47913770 -47358881 - ID SINE ID -145 79 24 1 950 625 230 37 0 chr17 47914397 47914532 -47358119 + ID_B1 SINE B4 84 223 -1 1 950 590 198 154 9 chr17 47914555 47914739 -47357912 + B3A SINE B2 3 207 -9 1 950 867 108 123 0 chr17 47914799 47914929 -47357722 + B1_Mus2 SINE Alu 2 147 0 1 950 1222 62 0 0 chr17 47915034 47915180 -47357471 + B1_Mus2 SINE Alu 2 147 0 1 950 1178 192 24 5 chr17 47915424 47915633 -47357018 - B3 SINE B2 0 216 4 1 950 1001 38 8 0 chr17 47915652 47915784 -47356867 - B1_Mus1 SINE Alu -1 147 15 1 950 504 238 114 15 chr17 47915793 47915925 -47356726 - ID_B1 SINE B4 -72 152 8 1 950 444 299 36 14 chr17 47915966 47916105 -47356546 - B1F SINE Alu -7 142 1 1 950 1270 96 21 0 chr17 47916120 47916308 -47356343 - B2_Mm2 SINE B2 -2 193 2 1 950 204 109 0 61 chr17 47916308 47916325 -47356326 + T-rich Low_complexity Low_complexity 36 51 0 1 950 1011 105 0 27 chr17 47916325 47916472 -47356179 - B1_Mus2 SINE Alu 0 147 5 1 950 204 109 0 61 chr17 47916472 47916503 -47356148 + T-rich Low_complexity Low_complexity 6 35 0 1 950 768 209 65 13 chr17 47916556 47916711 -47355940 - RSINE1 SINE B4 -1 164 2 1 950 867 171 0 14 chr17 47917135 47917277 -47355374 - B1_Mur2 SINE Alu -8 141 2 1 950 553 215 9 0 chr17 47917412 47917519 -47355132 - B1_Mur1 SINE Alu -40 109 2 1 950 304 299 67 17 chr17 47917519 47917530 -47355121 - B4A SINE B4 -92 199 76 1 950 739 255 112 0 chr17 47917663 47917859 -47354792 - ID_B1 SINE B4 -1 223 6 1 950 322 280 0 0 chr17 47917938 47918013 -47354638 + PB1D10 SINE Alu 40 114 -3 1 950 767 244 71 15 chr17 47918015 47918211 -47354440 + ID_B1 SINE B4 4 210 -14 1 950 337 326 23 23 chr17 47918511 47918643 -47354008 + MIR SINE MIR 8 139 -123 1 950 290 182 0 15 chr17 47918744 47918792 -47353859 + polypyrimidine Low_complexity Low_complexity 19 66 0 1 950 983 144 0 11 chr17 47918792 47918974 -47353677 + CT-rich Low_complexity Low_complexity 1 180 0 1 950 839 179 0 7 chr17 47918974 47919079 -47353572 + polypyrimidine Low_complexity Low_complexity 1 104 0 1 950 1017 150 0 0 chr17 47919079 47919259 -47353392 + (TCC)n Simple_repeat Simple_repeat 1 180 0 1 950 839 179 0 6 chr17 47919259 47919352 -47353299 + polypyrimidine Low_complexity Low_complexity 1 93 0 1 950 738 191 24 0 chr17 47919633 47919759 -47352892 - B1_Mur2 SINE Alu -19 130 2 1 950 184 245 20 0 chr17 47920437 47920486 -47352165 - MIRc SINE MIR -99 169 120 1 950 197 246 70 28 chr17 47921391 47921462 -47351189 - MIRm SINE MIR -132 144 71 1 950 225 271 0 0 chr17 47921629 47921688 -47350963 - MIR SINE MIR -85 123 65 1 950 766 282 88 85 chr17 47921947 47922634 -47350017 - L2a LINE L2 -54 3372 2665 1 950 293 274 136 8 chr17 47922729 47922854 -47349797 + MIRc SINE MIR 30 170 -98 1 950 240 35 0 0 chr17 47923036 47923065 -47349586 + (CAG)n Simple_repeat Simple_repeat 3 31 0 1 950 245 279 36 55 chr17 47924303 47924413 -47348238 + MIRb SINE MIR 93 200 -68 1 950 306 240 27 0 chr17 47924422 47924497 -47348154 + B3A SINE B2 1 77 -121 1 950 261 301 85 80 chr17 47924497 47924621 -47348030 + B4 SINE B4 1 200 -92 1 950 405 0 0 0 chr17 47925587 47925632 -47347019 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 1 950 518 195 110 0 chr17 47925632 47925750 -47346901 - B1_Mur2 SINE Alu -13 136 6 1 950 396 55 0 0 chr17 47927024 47927079 -47345572 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 950 529 88 50 0 chr17 47927113 47927193 -47345458 - B1_Mur3 SINE Alu -13 136 53 1 950 1201 22 0 7 chr17 47927236 47927376 -47345275 + B1_Mus1 SINE Alu 2 140 -8 1 950 279 284 98 27 chr17 47927411 47927523 -47345128 - PB1D7 SINE Alu 0 120 1 1 950 717 94 128 0 chr17 47927747 47927864 -47344787 - B1_Mus1 SINE Alu 0 148 17 1 950 180 0 0 0 chr17 47927864 47927884 -47344767 + (CCA)n Simple_repeat Simple_repeat 2 21 0 1 950 24 0 0 0 chr17 47931671 47931695 -47340956 + AT_rich Low_complexity Low_complexity 1 24 0 1 950 1265 40 0 0 chr17 47931997 47932145 -47340506 - B1_Mus1 SINE Alu 0 148 1 1 950 246 269 63 13 chr17 47932829 47932908 -47339743 + MIR SINE MIR 106 188 -74 1 950 183 42 0 0 chr17 47933783 47933807 -47338844 + (TCTG)n Simple_repeat Simple_repeat 1 24 0 1 950 963 227 35 0 chr17 47933845 47934048 -47338603 - B3 SINE B2 -5 211 2 1 950 589 253 67 12 chr17 47934066 47934230 -47338421 - B3A SINE B2 -3 195 23 1 950 620 196 64 105 chr17 47934227 47934398 -47338253 + B3 SINE B2 53 216 0 1 950 296 276 139 38 chr17 47934522 47934680 -47337971 + MIR SINE MIR 12 185 -77 1 950 587 225 54 0 chr17 47935077 47935206 -47337445 - MTD LTR MaLR -90 331 196 1 950 333 0 0 0 chr17 47935235 47935272 -47337379 + (TC)n Simple_repeat Simple_repeat 1 37 0 1 950 474 148 22 43 chr17 47935272 47935364 -47337287 - B1_Mur1 SINE Alu -25 124 35 1 950 1059 189 19 5 chr17 47935369 47935582 -47337069 - MTD LTR MaLR -203 216 1 1 950 716 184 37 0 chr17 47935640 47935776 -47336875 - B1_Mur2 SINE Alu -2 147 7 1 950 313 58 0 37 chr17 47935839 47935893 -47336758 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 1 950 216 360 45 0 chr17 47935968 47936057 -47336594 + B1F2 SINE Alu 3 95 -54 1 950 862 189 0 13 chr17 47936092 47936232 -47336419 + B1_Mur3 SINE Alu 2 139 -10 1 950 195 42 0 0 chr17 47936232 47936256 -47336395 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 950 708 236 92 25 chr17 47936267 47936463 -47336188 + ID_B1 SINE B4 1 209 -15 1 950 193 309 133 10 chr17 47937073 47937171 -47335480 - MIRb SINE MIR -128 140 31 1 950 3282 46 20 2 chr17 47937249 47937642 -47335009 + MTB LTR MaLR 1 400 0 1 950 517 242 33 0 chr17 47937987 47938107 -47334544 - ID_B1 SINE B4 -4 220 97 1 950 324 200 0 0 chr17 47938112 47938182 -47334469 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 950 282 289 0 13 chr17 47938241 47938318 -47334333 - ID_B1 SINE B4 -3 221 146 1 950 311 0 26 0 chr17 47938318 47938357 -47334294 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 950 272 308 80 91 chr17 47938430 47938716 -47333935 - B4A SINE B4 -8 284 2 1 950 233 247 78 49 chr17 47938993 47939095 -47333556 - L1MB7 LINE L1 -126 6058 5954 1 950 650 270 32 68 chr17 47939526 47939538 -47333113 - ID_B1 SINE B4 -1 223 213 1 950 195 42 0 0 chr17 47939538 47939562 -47333089 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 1 950 650 270 32 68 chr17 47939562 47939768 -47332883 - ID_B1 SINE B4 -12 212 13 1 950 234 0 0 0 chr17 47940559 47940585 -47332066 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 950 611 234 154 0 chr17 47940703 47940878 -47331773 + B3 SINE B2 5 206 -10 1 950 484 258 16 8 chr17 47941010 47941139 -47331512 + MTEb LTR MaLR 249 378 -1 1 950 318 316 0 0 chr17 47941142 47941221 -47331430 - L1MB7 LINE L1 -860 5286 5208 1 950 360 241 23 11 chr17 47941311 47941399 -47331252 + B4 SINE B4 133 221 -71 1 950 609 130 171 0 chr17 47941457 47941580 -47331071 + B1_Mus1 SINE Alu 5 148 0 1 950 206 119 48 0 chr17 47941581 47941623 -47331028 + A-rich Low_complexity Low_complexity 1 44 0 1 950 321 26 0 0 chr17 47941669 47941707 -47330944 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 1 950 1305 104 33 0 chr17 47941754 47941937 -47330714 - B2_Mm1t SINE B2 -4 189 1 1 950 280 299 26 0 chr17 47941941 47942018 -47330633 + ID4_ SINE ID 5 83 0 1 950 240 280 89 41 chr17 47942158 47942281 -47330370 - B1F2 SINE Alu -17 132 4 1 950 234 224 52 0 chr17 47942365 47942423 -47330228 + ID4 SINE ID 19 79 -4 1 950 461 252 98 0 chr17 47942499 47942622 -47330029 - MLT1L LTR MaLR -356 254 120 1 950 428 229 312 0 chr17 47942666 47942823 -47329828 + B3 SINE B2 1 206 -10 1 950 574 161 31 51 chr17 47942898 47943156 -47329495 + CT-rich Low_complexity Low_complexity 1 252 0 1 950 341 291 13 0 chr17 47943159 47943238 -47329413 - ID4_ SINE ID -2 81 2 1 950 547 301 94 58 chr17 47943258 47943533 -47329118 + MLT1J LTR MaLR 71 355 -157 1 950 387 301 0 75 chr17 47943770 47943903 -47328748 + PB1 SINE Alu 2 124 -3 1 950 251 191 191 0 chr17 47943927 47943990 -47328661 + BC1_Mm scRNA scRNA 20 94 -58 1 950 214 264 0 0 chr17 47944000 47944053 -47328598 + MIRc SINE MIR 115 167 -101 1 950 559 152 14 84 chr17 47944343 47944482 -47328169 + B1_Mm SINE Alu 9 149 -1 1 950 276 258 83 31 chr17 47944508 47944604 -47328047 + MLT1F1 LTR MaLR 230 330 -218 1 950 1885 119 171 0 chr17 47944600 47944927 -47327724 - ORR1B1 LTR MaLR -8 386 4 1 950 249 108 0 0 chr17 47944995 47945032 -47327619 + (CCA)n Simple_repeat Simple_repeat 1 37 0 1 950 2150 173 6 3 chr17 47945050 47945415 -47327236 + ORR1D1 LTR MaLR 6 371 -3 1 950 876 262 24 10 chr17 47945423 47945631 -47327020 - ID_B1 SINE B4 -9 215 5 1 950 507 302 12 12 chr17 47945646 47945807 -47326844 + MLT1F1 LTR MaLR 398 558 -11 1 950 878 211 0 0 chr17 47945865 47946012 -47326639 - B1_Mur4 SINE Alu 0 150 4 1 950 604 174 29 0 chr17 47946273 47946411 -47326240 + GA-rich Low_complexity Low_complexity 1 142 0 1 950 1235 222 97 16 chr17 47946428 47946749 -47325902 + ORR1D2 LTR MaLR 20 366 -4 1 950 1066 141 0 0 chr17 47947401 47947550 -47325101 + B1_Mur4 SINE Alu 2 150 0 1 950 1357 87 43 0 chr17 47947554 47947738 -47324913 + B2_Mm2 SINE B2 2 193 -2 1 950 1245 130 15 15 chr17 47947739 47947898 -47324753 + B2_Mm2 SINE B2 1 158 -37 1 950 330 26 0 0 chr17 47947898 47947937 -47324714 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 1 950 1245 130 15 15 chr17 47947937 47947972 -47324679 + B2_Mm2 SINE B2 159 195 0 1 950 293 0 0 0 chr17 47948835 47948870 -47323781 - U2 snRNA snRNA -153 35 1 1 950 238 263 0 17 chr17 47949086 47949144 -47323507 + C-rich Low_complexity Low_complexity 6 62 0 1 950 248 111 22 0 chr17 47950642 47950687 -47321964 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 950 302 239 0 0 chr17 47951316 47951328 -47321323 + B4 SINE B4 77 143 -149 1 950 305 130 0 18 chr17 47951328 47951383 -47321268 + B1_Mus1 SINE Alu 6 59 -89 1 950 221 326 138 92 chr17 47951982 47952178 -47320473 - B4 SINE B4 -82 210 6 1 950 511 200 16 32 chr17 47953324 47953448 -47319203 - MIR SINE MIR -31 231 110 1 950 1017 226 14 9 chr17 47953474 47953693 -47318958 + ID_B1 SINE B4 3 222 -2 1 950 1104 95 0 0 chr17 47953723 47953881 -47318770 + B2_Mm2 SINE B2 1 158 -37 1 950 555 16 0 0 chr17 47953881 47953945 -47318706 + (TAAA)n Simple_repeat Simple_repeat 2 65 0 1 950 1124 82 0 20 chr17 47953947 47954097 -47318554 - B1_Mus1 SINE Alu 0 148 2 1 950 23 33 0 0 chr17 47954105 47954135 -47318516 + AT_rich Low_complexity Low_complexity 1 30 0 1 950 1175 44 0 0 chr17 47954250 47954387 -47318264 + B1_Mus1 SINE Alu 1 137 -11 1 950 189 0 0 0 chr17 47954388 47954409 -47318242 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1 950 190 286 0 0 chr17 47954781 47954842 -47317809 + L2a LINE L2 3276 3377 -49 1 950 569 304 25 0 chr17 47954850 47955008 -47317643 + ID_B1 SINE B4 40 201 -23 1 950 264 224 0 69 chr17 47955655 47955727 -47316924 - ID4 SINE ID -15 68 2 1 950 276 30 0 0 chr17 47955830 47955863 -47316788 + (CG)n Simple_repeat Simple_repeat 1 33 0 1 950 414 0 0 0 chr17 47955863 47955908 -47316743 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 950 974 165 4 88 chr17 47955937 47956163 -47316488 + B3 SINE B2 10 216 0 1 950 1171 55 7 27 chr17 47956182 47956332 -47316319 - B1_Mus1 SINE Alu 0 148 2 1 950 201 147 0 0 chr17 47956348 47956382 -47316269 + (CAA)n Simple_repeat Simple_repeat 2 35 0 1 950 252 238 37 24 chr17 47956583 47956665 -47315986 + C-rich Low_complexity Low_complexity 2 84 0 1 950 24 0 0 0 chr17 47956734 47956758 -47315893 + AT_rich Low_complexity Low_complexity 1 24 0 1 950 2499 153 39 10 chr17 47957038 47957447 -47315204 + MTC LTR MaLR 1 421 0 1 950 427 202 0 0 chr17 47957461 47957540 -47315111 - RSINE1 SINE B4 -36 129 51 1 950 267 200 0 32 chr17 47957545 47957607 -47315044 - B4A SINE B4 -151 141 82 1 950 332 171 105 0 chr17 47957608 47957684 -47314967 - PB1D10 SINE Alu -2 115 32 1 950 303 308 98 0 chr17 47958072 47958215 -47314436 - MIRc SINE MIR -93 175 19 1 950 446 298 0 34 chr17 47959025 47959171 -47313480 - ID_B1 SINE B4 0 224 84 1 950 288 276 10 23 chr17 47959172 47959270 -47313381 - MIRc SINE MIR -112 156 57 1 950 297 51 0 0 chr17 47959369 47959408 -47313243 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1 950 743 186 267 0 chr17 47959408 47959569 -47313082 - B3 SINE B2 -12 204 1 1 950 210 91 0 0 chr17 47960206 47960239 -47312412 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 950 183 100 0 0 chr17 47960282 47960312 -47312339 + (A)n Simple_repeat Simple_repeat 1 30 0 1 950 195 114 0 28 chr17 47960442 47960478 -47312173 + MIR SINE MIR 110 144 -118 1 950 1005 67 0 0 chr17 47960606 47960740 -47311911 + B1_Mm SINE Alu 14 147 0 1 950 1502 11 0 11 chr17 47960753 47960824 -47311827 + (GAA)n Simple_repeat Simple_repeat 2 72 0 1 950 1275 89 0 0 chr17 47960824 47961003 -47311648 + (GGA)n Simple_repeat Simple_repeat 2 180 0 1 950 1502 11 0 11 chr17 47961003 47961112 -47311539 + (GAA)n Simple_repeat Simple_repeat 1 108 0 1 950 1213 108 37 16 chr17 47963125 47963314 -47309337 - B2_Mm2 SINE B2 -2 193 1 1 950 841 139 22 7 chr17 47963345 47963483 -47309168 + B2_Mm2 SINE B2 1 140 -55 1 950 225 0 0 0 chr17 47963501 47963526 -47309125 + (T)n Simple_repeat Simple_repeat 1 25 0 1 950 1106 64 50 0 chr17 47963540 47963680 -47308971 + B1_Mm SINE Alu 1 147 0 1 950 375 130 0 0 chr17 47963682 47963759 -47308892 + (A)n Simple_repeat Simple_repeat 1 77 0 1 950 869 212 0 96 chr17 47963767 47963976 -47308675 - B3A SINE B2 -1 197 9 1 950 538 183 28 46 chr17 47964005 47964114 -47308537 - PB1D7 SINE Alu -13 107 1 1 950 422 268 16 39 chr17 47964390 47964517 -47308134 + PB1D7 SINE Alu 1 119 -1 1 950 238 301 86 19 chr17 47964555 47964660 -47307991 + PB1D10 SINE Alu 5 116 -1 1 950 552 294 36 50 chr17 47964697 47964919 -47307732 + ID_B1 SINE B4 2 220 -4 1 950 303 163 32 52 chr17 47964944 47965099 -47307552 + (TATG)n Simple_repeat Simple_repeat 4 155 0 1 950 249 262 0 43 chr17 47965054 47965241 -47307410 + (TG)n Simple_repeat Simple_repeat 2 180 0 1 950 2353 154 30 39 chr17 47965330 47965795 -47306856 + RMER4A LTR ERVK 6 466 0 1 950 204 217 0 0 chr17 47966025 47966071 -47306580 + G-rich Low_complexity Low_complexity 6 51 0 1 950 402 57 0 0 chr17 47968477 47968530 -47304121 + (GA)n Simple_repeat Simple_repeat 1 53 0 1 950 342 0 0 0 chr17 47969252 47969290 -47303361 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 950 378 0 0 0 chr17 47969584 47969626 -47303025 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 950 237 325 14 32 chr17 47970130 47970314 -47302337 + C-rich Low_complexity Low_complexity 1 180 0 1 950 337 291 89 38 chr17 47971949 47972106 -47300545 - ID_B1 SINE B4 -54 170 6 1 950 372 272 29 19 chr17 47972182 47972287 -47300364 - PB1D10 SINE Alu -11 106 1 1 118 607 181 141 8 chr17 47972308 47972436 -47300215 - B1F2 SINE Alu 0 149 5 1 951 858 317 98 35 chr17 47972715 47973173 -47299478 - L1MA5 LINE L1 -369 5931 5445 1 951 737 51 10 0 chr17 47973311 47973409 -47299242 + (TTCC)n Simple_repeat Simple_repeat 1 99 0 1 951 669 193 111 0 chr17 47973422 47973557 -47299094 - B1_Mur4 SINE Alu 0 150 1 1 951 248 256 36 117 chr17 47973571 47973708 -47298943 - RLTR25A LTR ERVK -456 647 522 1 951 549 161 11 0 chr17 47973659 47973752 -47298899 - B1_Mur2 SINE Alu -55 94 1 1 951 339 292 39 56 chr17 47974133 47974179 -47298472 - B3 SINE B2 -1 215 168 1 951 306 0 0 0 chr17 47974179 47974213 -47298438 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 951 339 292 39 56 chr17 47974213 47974233 -47298418 - B3 SINE B2 -49 167 149 1 951 2244 89 12 44 chr17 47974233 47974573 -47298078 - ORR1A4 LTR MaLR 0 329 1 1 951 445 207 11 15 chr17 47974573 47974683 -47297968 - B3A SINE B2 -68 148 41 1 951 329 306 9 61 chr17 47975109 47975224 -47297427 - PB1 SINE Alu -16 111 3 1 951 407 272 48 62 chr17 47975293 47975315 -47297336 + ID_B1 SINE B4 82 224 0 1 951 517 185 81 32 chr17 47975315 47975438 -47297213 + B1F SINE Alu 20 148 -1 1 951 622 248 7 0 chr17 47975435 47975576 -47297075 + ID_B1 SINE B4 81 222 -2 1 951 396 267 95 15 chr17 47975584 47975721 -47296930 + RSINE1 SINE B4 3 150 -15 1 951 966 63 0 0 chr17 47975775 47975901 -47296750 + (TAGA)n Simple_repeat Simple_repeat 1 126 0 1 951 255 21 41 41 chr17 47976157 47976206 -47296445 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 1 951 1169 51 0 0 chr17 47976206 47976344 -47296307 - B1_Mm SINE Alu -9 138 1 1 951 975 252 65 19 chr17 47976391 47976654 -47295997 + Lx5 LINE L1 6701 6975 -75 1 951 332 309 21 21 chr17 47976663 47976759 -47295892 - B4A SINE B4 -183 109 14 1 951 314 192 0 60 chr17 47976781 47976864 -47295787 - L1MC LINE L1 -984 5162 5085 1 951 807 124 248 0 chr17 47976892 47977045 -47295606 - B2_Mm2 SINE B2 -3 192 2 1 951 1185 69 0 12 chr17 47977162 47977324 -47295327 + B2_Mm2 SINE B2 5 164 -31 1 951 249 314 81 0 chr17 47977324 47977448 -47295203 - L1MB4 LINE L1 -49 6131 5998 1 951 882 54 0 0 chr17 47977450 47977562 -47295089 + (TAGA)n Simple_repeat Simple_repeat 1 112 0 1 951 687 233 6 42 chr17 47977764 47977930 -47294721 - U1 snRNA snRNA -1 164 5 1 951 294 382 13 26 chr17 47978004 47978157 -47294494 - Charlie4z DNA MER1_type -3 164 14 1 951 232 125 42 0 chr17 47978806 47978854 -47293797 + (CACCC)n Simple_repeat Simple_repeat 5 54 0 1 951 352 323 30 65 chr17 47979868 47980037 -47292614 - MER20 DNA MER1_type -5 214 52 1 951 219 36 0 0 chr17 47980493 47980521 -47292130 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1 951 918 220 17 0 chr17 47980569 47980746 -47291905 - B3A SINE B2 -18 180 1 1 951 342 328 57 32 chr17 47980764 47980782 -47291869 + B4 SINE B4 73 93 -199 1 951 550 257 19 77 chr17 47980782 47980938 -47291713 + B1F2 SINE Alu 2 148 -1 1 951 773 123 9 0 chr17 47980949 47981063 -47291588 + B1_Mm SINE Alu 5 119 -28 1 951 545 241 34 74 chr17 47981061 47981209 -47291442 + ID_B1 SINE B4 76 217 -7 1 951 221 268 289 0 chr17 47981212 47981309 -47291342 + RSINE1 SINE B4 9 133 -32 1 951 304 167 137 53 chr17 47981377 47981472 -47291179 + BC1_Mm scRNA scRNA 1 103 -49 1 951 332 343 29 0 chr17 47981522 47981662 -47290989 - L1MC3 LINE L1 -129 7656 7513 1 951 516 77 0 0 chr17 47981673 47981751 -47290900 + (TC)n Simple_repeat Simple_repeat 2 79 0 1 951 736 228 0 0 chr17 47981767 47981903 -47290748 - B3 SINE B2 -1 215 80 1 951 2803 141 0 5 chr17 47981903 47982324 -47290327 - MTC LTR MaLR -2 419 1 1 951 215 264 7 167 chr17 47982324 47982340 -47290311 - B2_Mm1t SINE B2 -113 80 66 1 951 274 327 84 30 chr17 47982728 47982895 -47289756 + MLT1D LTR MaLR 316 491 -14 1 951 300 354 0 0 chr17 47983019 47983040 -47289611 + ID_B1 SINE B4 62 157 -67 1 951 312 307 0 0 chr17 47983040 47983115 -47289536 + PB1D10 SINE Alu 2 76 -41 1 951 442 167 0 0 chr17 47983115 47983187 -47289464 + RSINE1 SINE B4 7 78 -87 1 951 1033 95 0 21 chr17 47983253 47983393 -47289258 + B1_Mus1 SINE Alu 2 138 -10 1 951 330 132 0 0 chr17 47983409 47983462 -47289189 + (TAA)n Simple_repeat Simple_repeat 2 54 0 1 951 280 264 132 0 chr17 47983504 47983595 -47289056 + B1_Mur2 SINE Alu 27 129 -20 1 951 523 300 29 92 chr17 47984002 47984241 -47288410 + ORR1E LTR MaLR 50 273 -97 1 951 962 227 19 5 chr17 47984434 47984642 -47288009 + B3 SINE B2 1 211 -5 1 951 182 105 26 0 chr17 47984649 47984687 -47287964 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 951 693 280 43 95 chr17 47984696 47985043 -47287608 - ORR1D2 LTR MaLR -33 337 9 1 951 487 245 90 7 chr17 47985027 47985047 -47287604 - B2_Mm2 SINE B2 0 195 176 1 951 230 0 33 0 chr17 47985047 47985077 -47287574 + (TTAA)n Simple_repeat Simple_repeat 1 31 0 1 951 487 246 96 7 chr17 47985077 47985217 -47287434 - B2_Mm2 SINE B2 -20 175 13 1 951 327 223 49 89 chr17 47985522 47985645 -47287006 + L1MB8 LINE L1 6060 6177 -1 1 951 242 158 0 50 chr17 47985759 47985782 -47286869 + A-rich Low_complexity Low_complexity 1 21 0 1 951 1028 50 0 0 chr17 47985782 47985901 -47286750 + 5S rRNA rRNA 1 119 -2 1 951 242 158 0 50 chr17 47985901 47985937 -47286714 + A-rich Low_complexity Low_complexity 22 57 0 1 951 1098 123 0 0 chr17 47986388 47986559 -47286092 + (TTC)n Simple_repeat Simple_repeat 3 173 0 1 951 690 114 0 0 chr17 47986674 47986779 -47285872 - ORR1B1 LTR MaLR -79 315 211 1 951 222 196 0 0 chr17 47986797 47986843 -47285808 + G-rich Low_complexity Low_complexity 2 47 0 1 951 576 268 117 75 chr17 47987306 47987520 -47285131 + ID_B1 SINE B4 2 224 0 1 951 225 0 0 0 chr17 47987757 47987782 -47284869 + (A)n Simple_repeat Simple_repeat 1 25 0 1 951 238 224 197 0 chr17 47987840 47987916 -47284735 - PB1D10 SINE Alu -23 94 4 1 951 295 214 87 58 chr17 47988145 47988249 -47284402 - PB1D9 SINE Alu 0 120 14 1 951 286 356 40 14 chr17 47988316 47988464 -47284187 - MIRb SINE MIR -74 194 43 1 951 1011 169 49 139 chr17 47988859 47989183 -47283468 - RLTRETN_Mm LTR ERVK -27 295 1 1 951 225 0 0 0 chr17 47989779 47989804 -47282847 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1 951 420 20 0 0 chr17 47989813 47989862 -47282789 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 951 458 298 0 0 chr17 47989867 47989981 -47282670 - RSINE1 SINE B4 -48 117 4 1 951 902 138 6 0 chr17 47990142 47990302 -47282349 + (TCC)n Simple_repeat Simple_repeat 2 162 0 1 951 225 250 0 0 chr17 47990309 47990353 -47282298 + C-rich Low_complexity Low_complexity 3 46 0 1 951 217 284 0 58 chr17 47990460 47990546 -47282105 + ID2 SINE ID 1 81 -2 1 951 422 325 123 44 chr17 47990475 47990726 -47281925 + B4 SINE B4 14 284 -8 1 951 235 275 72 0 chr17 47990990 47991059 -47281592 + B4 SINE B4 219 292 0 1 951 293 192 25 8 chr17 47991059 47991180 -47281471 + (CA)n Simple_repeat Simple_repeat 1 123 0 1 951 486 192 0 18 chr17 47991214 47991378 -47281273 + (CA)n Simple_repeat Simple_repeat 2 162 0 1 951 189 0 0 0 chr17 47991398 47991419 -47281232 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 951 571 333 53 13 chr17 47991934 47992238 -47280413 - HAL1 LINE L1 -819 1688 1373 1 951 322 265 41 0 chr17 47992336 47992434 -47280217 - PB1 SINE Alu -3 124 23 1 951 315 0 0 0 chr17 47992468 47992503 -47280148 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 951 28 29 0 0 chr17 47992527 47992562 -47280089 + AT_rich Low_complexity Low_complexity 1 35 0 1 951 917 244 14 23 chr17 47992603 47992821 -47279830 - B3 SINE B2 0 216 1 1 951 436 298 84 70 chr17 47992823 47993036 -47279615 - ID_B1 SINE B4 0 224 9 1 951 946 109 13 75 chr17 47993056 47993215 -47279436 - B1_Mur3 SINE Alu 0 149 1 1 951 432 198 136 19 chr17 47993221 47993324 -47279327 - PB1D10 SINE Alu -1 116 2 1 951 355 203 31 39 chr17 47993334 47993462 -47279189 - HAL1 LINE L1 -1383 1124 998 1 951 661 186 35 17 chr17 47993491 47993606 -47279045 + PB1D9 SINE Alu 3 119 -1 1 951 519 95 0 0 chr17 47993615 47993689 -47278962 + (GAAAA)n Simple_repeat Simple_repeat 3 76 0 1 951 738 231 21 0 chr17 47993713 47993856 -47278795 + B1_Mur3 SINE Alu 4 149 0 1 951 354 207 0 17 chr17 47993868 47994045 -47278606 + (TG)n Simple_repeat Simple_repeat 1 174 0 1 951 342 182 13 25 chr17 47994688 47994767 -47277884 - PB1D10 SINE Alu 0 117 40 1 951 660 261 60 5 chr17 47994798 47994983 -47277668 + B3A SINE B2 3 197 -1 1 951 820 227 11 17 chr17 47995017 47995196 -47277455 + B3 SINE B2 1 178 -38 1 951 1244 48 0 7 chr17 47995212 47995360 -47277291 - B1_Mus1 SINE Alu -1 147 1 1 951 822 180 0 50 chr17 47995397 47995537 -47277114 + B1_Mur1 SINE Alu 4 136 -13 1 951 182 37 0 36 chr17 47995538 47995566 -47277085 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 1 951 297 341 12 0 chr17 47995590 47995672 -47276979 + ID_B1 SINE B4 82 164 -60 1 951 273 348 8 50 chr17 47995672 47995711 -47276940 + PB1D10 SINE Alu 1 116 -1 1 951 221 327 85 99 chr17 47995748 47996006 -47276645 + B4A SINE B4 15 270 -22 1 951 272 111 19 0 chr17 47996006 47996060 -47276591 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 951 221 327 85 99 chr17 47996060 47996083 -47276568 + B4A SINE B4 271 292 0 1 951 626 164 7 0 chr17 47996096 47996242 -47276409 + (CA)n Simple_repeat Simple_repeat 2 148 0 1 951 373 174 0 0 chr17 47996903 47996972 -47275679 - B1_Mur2 SINE Alu -47 102 34 1 951 426 121 0 0 chr17 47997011 47997077 -47275574 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 951 612 286 29 82 chr17 47997077 47997321 -47275330 - B4 SINE B4 -61 231 1 1 951 420 20 0 0 chr17 47997919 47997968 -47274683 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 951 612 38 0 0 chr17 47997968 47998046 -47274605 + (GA)n Simple_repeat Simple_repeat 1 79 0 1 951 579 126 0 0 chr17 47998674 47998769 -47273882 + (TCC)n Simple_repeat Simple_repeat 1 95 0 1 951 517 264 56 0 chr17 47998878 47999003 -47273648 - RSINE1 SINE B4 -32 133 2 1 951 436 229 34 84 chr17 47999012 47999131 -47273520 - PB1D7 SINE Alu -7 113 1 1 951 241 348 29 0 chr17 47999157 47999226 -47273425 - B1F SINE Alu -35 114 44 1 951 295 162 13 93 chr17 47999468 47999543 -47273108 - PB1D10 SINE Alu -9 108 40 1 951 234 150 0 0 chr17 47999808 47999848 -47272803 + (CACCAT)n Simple_repeat Simple_repeat 6 45 0 1 951 511 149 138 17 chr17 48000328 48000444 -47272207 - RSINE1 SINE B4 -25 140 11 1 951 414 237 10 31 chr17 48000843 48000939 -47271712 - B1F SINE Alu -50 99 6 2 951 286 294 143 2 chr17 48000952 48001096 -47271555 + MIRb SINE MIR 99 268 0 3 951 1279 14 0 7 chr17 48001110 48001258 -47271393 - B1_Mm SINE Alu 0 147 1 4 951 490 211 74 15 chr17 48001281 48001416 -47271235 - ID_B1 SINE B4 -7 217 75 5 951 859 216 51 47 chr17 48001836 48002050 -47270601 + B3 SINE B2 2 216 0 6 951 1189 14 20 14 chr17 48002055 48002201 -47270450 + B1_Mm SINE Alu 1 147 0 7 951 180 0 0 0 chr17 48002201 48002221 -47270430 + (A)n Simple_repeat Simple_repeat 1 20 0 8 951 687 25 0 0 chr17 48002221 48002302 -47270349 + (GA)n Simple_repeat Simple_repeat 2 82 0 9 951 29 0 0 0 chr17 48002322 48002351 -47270300 + AT_rich Low_complexity Low_complexity 1 29 0 1 951 596 229 20 40 chr17 48002437 48002587 -47270064 + B1_Mm SINE Alu 1 147 0 1 951 309 26 0 0 chr17 48003217 48003255 -47269396 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 951 609 14 0 0 chr17 48005870 48005940 -47266711 + (GA)n Simple_repeat Simple_repeat 1 70 0 1 951 716 136 7 43 chr17 48007037 48007175 -47265476 + B1_Mur4 SINE Alu 18 150 0 1 951 308 246 15 0 chr17 48007179 48007244 -47265407 - ID_B1 SINE B4 -74 150 85 1 951 491 186 239 0 chr17 48008471 48008584 -47264067 + B1_Mur1 SINE Alu 5 144 -5 1 951 412 306 19 70 chr17 48011233 48011391 -47261260 + ID_B1 SINE B4 30 179 -45 1 951 378 0 0 0 chr17 48012974 48013016 -47259635 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 951 583 153 7 7 chr17 48013193 48013344 -47259307 + (CA)n Simple_repeat Simple_repeat 1 151 0 1 951 219 167 0 0 chr17 48015892 48015934 -47256717 + (CACG)n Simple_repeat Simple_repeat 2 43 0 2 951 429 20 0 0 chr17 48016052 48016102 -47256549 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 951 189 0 0 0 chr17 48016454 48016475 -47256176 + (CCTG)n Simple_repeat Simple_repeat 3 23 0 2 951 358 309 64 0 chr17 48018035 48018129 -47254522 - PB1D10 SINE Alu -11 106 7 2 951 392 136 123 36 chr17 48018133 48018243 -47254408 - B1F SINE Alu -1 119 2 2 951 435 283 117 0 chr17 48018545 48018665 -47253986 + B1_Mur1 SINE Alu 3 136 -13 2 951 202 288 153 48 chr17 48019094 48019218 -47253433 + L2b LINE L2 3238 3374 -1 2 951 839 250 48 19 chr17 48019688 48019896 -47252755 + ID_B1 SINE B4 3 216 -8 2 951 210 143 0 0 chr17 48019905 48019940 -47252711 + (ATG)n Simple_repeat Simple_repeat 2 36 0 2 951 646 184 79 29 chr17 48019947 48020087 -47252564 + B1_Mus1 SINE Alu 2 148 0 2 951 258 32 0 0 chr17 48020365 48020396 -47252255 + (TCC)n Simple_repeat Simple_repeat 2 32 0 3 951 719 221 0 20 chr17 48020396 48020544 -47252107 - B1_Mur3 SINE Alu 0 149 5 3 951 278 288 0 133 chr17 48020431 48020559 -47252092 - MT2B LTR ERVL -337 264 154 3 951 27 0 0 0 chr17 48020560 48020587 -47252064 + AT_rich Low_complexity Low_complexity 1 27 0 3 951 401 156 13 0 chr17 48020600 48020677 -47251974 + GA-rich Low_complexity Low_complexity 1 78 0 3 951 660 218 9 9 chr17 48021392 48021539 -47251112 + B1F1 SINE Alu 2 148 -1 3 951 497 240 114 15 chr17 48021563 48021694 -47250957 + ID_B1 SINE B4 8 151 -73 3 951 986 53 8 0 chr17 48021704 48021837 -47250814 + B1_Mus1 SINE Alu 15 148 0 3 951 228 261 0 68 chr17 48021863 48021937 -47250714 + ID_B1 SINE B4 143 211 -13 3 951 658 216 0 86 chr17 48021943 48022105 -47250546 - B1_Mus1 SINE Alu 0 148 1 3 951 288 0 0 0 chr17 48022117 48022149 -47250502 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 3 951 624 274 128 84 chr17 48022819 48023162 -47249489 + MTE2a LTR MaLR 8 365 -14 4 951 204 40 0 0 chr17 48023212 48023237 -47249414 + (T)n Simple_repeat Simple_repeat 1 25 0 4 951 274 364 12 64 chr17 48023350 48023523 -47249128 + B4 SINE B4 129 292 0 4 951 210 233 0 0 chr17 48023523 48023583 -47249068 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 951 203 147 0 0 chr17 48024530 48024564 -47248087 + (CCCCCT)n Simple_repeat Simple_repeat 5 38 0 4 951 228 135 0 0 chr17 48025250 48025287 -47247364 + (TGGGGG)n Simple_repeat Simple_repeat 6 42 0 4 951 374 122 26 61 chr17 48025541 48025634 -47247017 - B1_Mus2 SINE Alu -1 149 50 4 951 236 231 0 122 chr17 48025578 48025652 -47246999 - MT2B2 LTR ERVL -326 258 194 4 951 192 352 22 11 chr17 48025659 48025748 -47246903 - MIRb SINE MIR -77 191 102 4 951 254 300 44 114 chr17 48026242 48026442 -47246209 + MIRb SINE MIR 15 206 -62 4 951 278 215 0 58 chr17 48026699 48026768 -47245883 - ID4 SINE ID -18 65 1 5 951 228 163 0 0 chr17 48028060 48028103 -47244548 + (CTCA)n Simple_repeat Simple_repeat 4 46 0 5 951 195 184 0 0 chr17 48028671 48028709 -47243942 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 951 465 310 12 43 chr17 48028715 48028877 -47243774 - RSINE1 SINE B4 -8 157 1 5 951 1163 97 11 22 chr17 48029174 48029354 -47243297 + B2_Mm2 SINE B2 1 178 -17 5 951 725 188 14 0 chr17 48029612 48029750 -47242901 - B1_Mur2 SINE Alu 0 149 10 5 951 371 305 48 0 chr17 48029975 48030080 -47242571 + ID_B1 SINE B4 49 158 -66 5 951 574 97 29 38 chr17 48030086 48030205 -47242446 + B1_Mur4 SINE Alu 6 120 0 5 951 660 87 0 0 chr17 48030223 48030315 -47242336 + (GAAA)n Simple_repeat Simple_repeat 3 94 0 5 951 1010 73 0 0 chr17 48030373 48030509 -47242142 - B1_Mus2 SINE Alu 0 147 12 5 951 423 189 8 109 chr17 48030408 48030527 -47242124 - MT2B LTR ERVL -337 264 158 6 951 323 23 23 0 chr17 48030543 48030587 -47242064 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 6 951 293 331 68 42 chr17 48030660 48030879 -47241772 + MIRb SINE MIR 21 261 -1 6 951 967 144 249 0 chr17 48031119 48031292 -47241359 + B3 SINE B2 1 216 0 6 951 890 180 0 6 chr17 48032100 48032279 -47240372 + CT-rich Low_complexity Low_complexity 3 180 0 6 951 1214 61 0 0 chr17 48032290 48032437 -47240214 - B1_Mus1 SINE Alu 0 148 2 6 951 546 280 190 4 chr17 48032676 48032913 -47239738 - B4 SINE B4 -4 288 8 6 951 581 168 181 0 chr17 48032924 48032951 -47239700 - B2_Mm1t SINE B2 -3 190 152 6 951 270 0 0 0 chr17 48032951 48032981 -47239670 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 6 951 756 99 99 0 chr17 48032981 48033102 -47239549 - B2_Mm2 SINE B2 -48 147 15 6 951 641 66 0 11 chr17 48033108 48033200 -47239451 + (TTTC)n Simple_repeat Simple_repeat 3 93 0 7 951 1254 65 0 6 chr17 48033203 48033373 -47239278 - B2_Mm2 SINE B2 -26 169 1 7 951 867 193 99 6 chr17 48033439 48033611 -47239040 - B3 SINE B2 -28 188 1 7 951 267 355 32 0 chr17 48033616 48033709 -47238942 - PB1D10 SINE Alu -1 116 21 7 951 366 23 0 0 chr17 48034108 48034151 -47238500 + (TC)n Simple_repeat Simple_repeat 1 43 0 7 951 594 306 46 0 chr17 48035845 48036018 -47236633 - ID_B1 SINE B4 -30 194 14 7 951 405 0 0 0 chr17 48036683 48036728 -47235923 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 951 236 286 0 25 chr17 48036755 48036834 -47235817 - B4A SINE B4 -4 288 212 7 951 763 254 56 45 chr17 48036888 48037138 -47235513 - B4A SINE B4 -43 249 1 7 951 491 262 9 0 chr17 48037151 48037258 -47235393 - PB1D10 SINE Alu -9 108 1 7 951 1253 61 92 0 chr17 48037458 48037622 -47235029 + B2_Mm2 SINE B2 2 180 -15 8 951 213 39 0 0 chr17 48037622 48037648 -47235003 + (GA)n Simple_repeat Simple_repeat 1 26 0 8 951 21 0 0 0 chr17 48038017 48038038 -47234613 + GC_rich Low_complexity Low_complexity 1 21 0 8 951 270 136 0 0 chr17 48038131 48038175 -47234476 + (TTTC)n Simple_repeat Simple_repeat 2 45 0 8 951 652 268 72 0 chr17 48038532 48038685 -47233966 - RSINE1 SINE B4 0 165 2 8 951 25 0 0 0 chr17 48038690 48038715 -47233936 + AT_rich Low_complexity Low_complexity 1 25 0 8 951 658 261 119 0 chr17 48038865 48039041 -47233610 - B3A SINE B2 0 198 2 8 951 603 0 0 0 chr17 48039053 48039120 -47233531 + (CATATA)n Simple_repeat Simple_repeat 1 67 0 8 951 270 136 0 0 chr17 48039120 48039164 -47233487 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 951 237 245 61 160 chr17 48039270 48039401 -47233250 + RSINE1 SINE B4 47 164 -1 8 951 1086 45 0 49 chr17 48039433 48039575 -47233076 + B1_Mus1 SINE Alu 2 136 -12 9 951 504 147 154 19 chr17 48039593 48039697 -47232954 + PB1D9 SINE Alu 2 119 -1 9 951 220 136 0 22 chr17 48039697 48039742 -47232909 + A-rich Low_complexity Low_complexity 1 44 0 9 951 226 250 0 56 chr17 48039748 48039820 -47232831 + B4A SINE B4 223 290 -2 9 951 686 230 72 53 chr17 48040476 48040683 -47231968 + B3 SINE B2 4 214 -2 9 951 270 81 0 0 chr17 48040702 48040739 -47231912 + (TATG)n Simple_repeat Simple_repeat 1 37 0 9 951 222 174 0 0 chr17 48042065 48042111 -47230540 + CT-rich Low_complexity Low_complexity 1 46 0 9 951 1328 135 0 5 chr17 48042111 48042305 -47230346 - B2_Mm2 SINE B2 -1 194 2 9 951 225 291 12 12 chr17 48042344 48042424 -47230227 - MIRb SINE MIR -66 202 123 9 951 1002 81 36 0 chr17 48042552 48042803 -47229848 + (GGAA)n Simple_repeat Simple_repeat 1 260 0 9 951 293 162 147 47 chr17 48042812 48042860 -47229791 + PB1D7 SINE Alu 13 119 -1 1 951 293 140 0 0 chr17 48042860 48042910 -47229741 + ID_B1 SINE B4 174 223 -1 1 951 826 100 0 51 chr17 48042910 48043032 -47229619 + B1_Mus1 SINE Alu 19 139 -9 1 951 459 0 0 0 chr17 48043032 48043083 -47229568 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 951 826 100 0 51 chr17 48043083 48043097 -47229554 + B1_Mus1 SINE Alu 140 148 0 1 951 448 89 25 0 chr17 48043427 48043506 -47229145 + (CA)n Simple_repeat Simple_repeat 2 82 0 1 951 360 336 23 8 chr17 48045831 48045963 -47226688 + ID_B1 SINE B4 84 217 -7 1 951 1751 16 0 0 chr17 48048925 48049118 -47223533 + B2_Mm1a SINE B2 1 193 0 1 951 1211 74 0 0 chr17 48049204 48049352 -47223299 + B1_Mus1 SINE Alu 1 148 0 1 951 516 227 18 0 chr17 48049419 48049529 -47223122 + PB1D10 SINE Alu 6 117 0 1 951 287 321 53 0 chr17 48049529 48049550 -47223101 + ID_B1 SINE B4 87 224 0 1 951 221 118 20 0 chr17 48049551 48049602 -47223049 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 1 951 455 265 0 0 chr17 48049609 48049707 -47222944 + B1F2 SINE Alu 4 101 -48 1 951 355 159 67 22 chr17 48049870 48049960 -47222691 - PB1D10 SINE Alu 0 117 24 1 951 531 246 53 8 chr17 48049972 48050103 -47222548 - ID_B1 SINE B4 -8 216 80 1 951 248 311 57 64 chr17 48050451 48050592 -47222059 + MER5B DNA MER1_type 39 178 0 1 951 416 178 0 43 chr17 48050592 48050780 -47221871 + CT-rich Low_complexity Low_complexity 1 180 0 1 951 261 0 0 0 chr17 48050796 48050825 -47221826 + (TC)n Simple_repeat Simple_repeat 1 29 0 1 951 522 43 0 0 chr17 48050825 48050893 -47221758 + (CA)n Simple_repeat Simple_repeat 1 69 0 1 951 219 366 14 43 chr17 48051016 48051156 -47221495 - BC1_Mm scRNA scRNA -15 137 2 1 951 237 98 0 0 chr17 48051159 48051200 -47221451 + (A)n Simple_repeat Simple_repeat 1 41 0 1 951 254 320 20 20 chr17 48051219 48051318 -47221333 - B1_Mus2 SINE Alu -12 135 37 1 951 383 255 11 0 chr17 48052947 48053041 -47219610 + PB1D10 SINE Alu 23 117 0 1 951 237 159 0 0 chr17 48053041 48053085 -47219566 + GA-rich Low_complexity Low_complexity 4 47 0 1 951 395 221 16 40 chr17 48053118 48053244 -47219407 + B3 SINE B2 2 211 -5 1 951 763 226 22 6 chr17 48053646 48053828 -47218823 - URR1A DNA MER1_type 0 226 42 1 951 623 300 18 18 chr17 48054058 48054221 -47218430 + RSINE1 SINE B4 3 165 0 1 951 1266 41 0 0 chr17 48055478 48055624 -47217027 - B1_Mus2 SINE Alu 0 147 2 1 951 212 0 0 35 chr17 48056240 48056269 -47216382 + (TAGA)n Simple_repeat Simple_repeat 2 29 0 1 951 252 0 0 0 chr17 48056575 48056603 -47216048 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 951 252 0 0 0 chr17 48056603 48056630 -47216021 + (GA)n Simple_repeat Simple_repeat 1 28 0 1 951 242 300 33 22 chr17 48057366 48057458 -47215193 + MIR SINE MIR 55 147 -61 1 951 345 269 19 37 chr17 48058662 48058770 -47213881 + PB1D7 SINE Alu 5 110 -10 1 951 240 163 0 0 chr17 48059090 48059133 -47213518 + GA-rich Low_complexity Low_complexity 3 45 0 1 951 297 0 0 0 chr17 48060362 48060395 -47212256 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 1 951 27 62 0 0 chr17 48061455 48061503 -47211148 + GC_rich Low_complexity Low_complexity 1 48 0 1 951 254 253 0 22 chr17 48061646 48061735 -47210916 + GA-rich Low_complexity Low_complexity 1 87 0 1 951 195 100 0 0 chr17 48062371 48062401 -47210250 + (TGGGGG)n Simple_repeat Simple_repeat 6 35 0 1 951 519 226 0 0 chr17 48063196 48063302 -47209349 + ID_B1 SINE B4 112 217 -7 1 951 243 180 60 0 chr17 48063258 48063308 -47209343 + PB1D7 SINE Alu 67 119 -1 1 951 224 325 112 0 chr17 48063309 48063389 -47209262 + RSINE1 SINE B4 1 89 -76 1 951 1148 60 48 0 chr17 48063400 48063566 -47209085 + B2_Mm2 SINE B2 21 194 -1 1 951 22 56 0 0 chr17 48063600 48063636 -47209015 + AT_rich Low_complexity Low_complexity 1 36 0 1 951 276 337 64 17 chr17 48063696 48063868 -47208783 - MIR SINE MIR -47 215 36 1 951 3617 18 0 2 chr17 48064421 48064818 -47207833 - MTA_Mm LTR MaLR 0 396 1 1 951 528 16 0 0 chr17 48065191 48065252 -47207399 + (TCCC)n Simple_repeat Simple_repeat 4 64 0 1 951 207 0 0 0 chr17 48065252 48065275 -47207376 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 951 792 182 7 27 chr17 48065275 48065416 -47207235 - B1_Mur3 SINE Alu -5 144 6 1 951 192 40 0 0 chr17 48065451 48065476 -47207175 + (TTTC)n Simple_repeat Simple_repeat 1 25 0 1 951 818 180 6 0 chr17 48065478 48065656 -47206995 + CT-rich Low_complexity Low_complexity 2 180 0 1 951 1164 64 0 0 chr17 48065668 48065808 -47206843 - B1_Mus1 SINE Alu -7 141 2 1 951 1586 47 0 45 chr17 48065831 48066033 -47206618 - B2_Mm1a SINE B2 0 193 1 1 951 220 281 146 0 chr17 48066117 48066199 -47206452 - MIRc SINE MIR -100 168 75 1 951 969 159 40 35 chr17 48066436 48066452 -47206199 - B3 SINE B2 -5 211 197 1 951 351 0 0 0 chr17 48066452 48066491 -47206160 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 951 969 159 40 35 chr17 48066491 48066676 -47205975 - B3 SINE B2 -20 196 9 1 951 647 228 57 28 chr17 48066710 48066886 -47205765 - B3A SINE B2 -16 182 2 1 951 223 243 0 125 chr17 48066888 48066968 -47205683 + B1F SINE Alu 23 92 -57 1 951 714 118 14 124 chr17 48067864 48068009 -47204642 + B1_Mur2 SINE Alu 15 143 -6 1 951 308 200 58 81 chr17 48068028 48068115 -47204536 - B1F1 SINE Alu -60 89 5 1 951 225 324 0 42 chr17 48068849 48068920 -47203731 + tRNA-Ala-GCY_ tRNA tRNA 5 72 -3 1 951 528 261 8 160 chr17 48068863 48068962 -47203689 + ID_B1 SINE B4 23 223 -1 1 951 668 217 14 0 chr17 48068962 48069100 -47203551 + B1F SINE Alu 9 148 -1 1 951 829 207 56 121 chr17 48069531 48069762 -47202889 + B3 SINE B2 1 216 0 1 951 822 234 25 45 chr17 48069774 48069975 -47202676 + B3A SINE B2 2 198 0 1 951 198 0 0 0 chr17 48070012 48070034 -47202617 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1 951 1169 32 32 13 chr17 48070035 48070192 -47202459 - B2_Mm2 SINE B2 -34 161 2 1 951 619 291 64 0 chr17 48070200 48070372 -47202279 - B3A SINE B2 -8 190 8 1 951 418 231 0 0 chr17 48070724 48070802 -47201849 - ID4 SINE ID -4 79 2 1 951 318 254 91 147 chr17 48070894 48070934 -47201717 - B2_Mm2 SINE B2 -8 187 150 1 951 297 0 0 0 chr17 48070934 48070967 -47201684 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 951 539 206 109 29 chr17 48070967 48071124 -47201527 - B3 SINE B2 -46 149 1 1 951 360 288 25 93 chr17 48071823 48071984 -47200667 - RSINE1 SINE B4 0 165 16 1 951 1092 215 33 5 chr17 48072011 48072221 -47200430 - B3 SINE B2 0 216 1 1 951 632 280 7 0 chr17 48072360 48072510 -47200141 - ID_B1 SINE B4 -73 151 1 1 951 983 154 207 0 chr17 48072812 48072981 -47199670 + B3 SINE B2 1 204 -12 1 951 216 0 0 0 chr17 48072987 48073011 -47199640 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 951 389 305 0 0 chr17 48073539 48073644 -47199007 + PB1D10 SINE Alu 4 108 -9 1 951 684 296 73 10 chr17 48073665 48073870 -47198781 + ID_B1 SINE B4 6 223 -1 1 951 819 157 63 21 chr17 48073880 48074023 -47198628 + B1_Mur4 SINE Alu 2 150 0 1 951 207 0 0 0 chr17 48074092 48074115 -47198536 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 951 444 202 8 99 chr17 48074118 48074199 -47198452 - B3A SINE B2 -87 111 36 1 951 1347 68 45 0 chr17 48074199 48074376 -47198275 + B2_Mm1a SINE B2 2 186 -7 1 951 444 202 8 99 chr17 48074376 48074415 -47198236 - B3A SINE B2 -163 35 2 1 951 279 0 0 0 chr17 48074420 48074451 -47198200 + (A)n Simple_repeat Simple_repeat 1 31 0 1 951 418 259 12 154 chr17 48074556 48074725 -47197926 + RSINE1 SINE B4 20 164 -1 1 951 238 196 0 0 chr17 48074734 48074785 -47197866 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 951 226 279 7 13 chr17 48074986 48075063 -47197588 + L2b LINE L2 3112 3190 -197 1 951 337 281 31 0 chr17 48075531 48075627 -47197024 - MER58D DNA MER1_type 0 386 288 1 951 1374 232 159 77 chr17 48075835 48076154 -47196497 - RMER4B LTR ERVK -6 579 191 1 951 1226 68 0 0 chr17 48076154 48076301 -47196350 + B1_Mus1 SINE Alu 2 148 0 1 951 1374 232 159 77 chr17 48076301 48076503 -47196148 - RMER4B LTR ERVK -395 190 16 1 951 398 229 12 12 chr17 48076507 48076591 -47196060 - B1_Mur4 SINE Alu -66 84 1 1 951 608 291 41 33 chr17 48076709 48077001 -47195650 + ORR1E LTR MaLR 4 296 -74 1 951 180 158 0 0 chr17 48077036 48077074 -47195577 + C-rich Low_complexity Low_complexity 1 38 0 1 951 437 194 34 46 chr17 48077145 48077268 -47195383 + B1_Mur1 SINE Alu 1 136 -13 1 951 251 28 28 0 chr17 48077268 48077304 -47195347 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1 951 437 177 0 50 chr17 48077304 48077317 -47195334 + B1_Mur1 SINE Alu 137 148 -1 1 951 579 281 102 0 chr17 48077426 48077622 -47195029 + ID_B1 SINE B4 1 216 -8 1 951 389 180 11 0 chr17 48077643 48077732 -47194919 + (CA)n Simple_repeat Simple_repeat 2 91 0 1 951 491 258 16 24 chr17 48077734 48077861 -47194790 + ID_B1 SINE B4 91 216 -8 1 951 230 250 54 0 chr17 48077813 48077869 -47194782 + PB1D10 SINE Alu 59 117 0 1 951 730 271 68 0 chr17 48077994 48078171 -47194480 + B3 SINE B2 28 216 0 1 951 209 98 24 0 chr17 48078385 48078426 -47194225 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 951 378 301 68 0 chr17 48078471 48078574 -47194077 - RSINE1 SINE B4 -53 112 3 1 951 341 328 134 26 chr17 48078934 48079203 -47193448 - MLT1C LTR MaLR -121 346 49 1 951 345 47 0 0 chr17 48079210 48079253 -47193398 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 951 200 281 0 30 chr17 48079559 48079625 -47193026 + C-rich Low_complexity Low_complexity 3 66 0 2 951 422 202 6 18 chr17 48079797 48079968 -47192683 + (CA)n Simple_repeat Simple_repeat 2 170 0 2 951 540 30 0 0 chr17 48080048 48080114 -47192537 + (CA)n Simple_repeat Simple_repeat 2 67 0 2 951 655 283 42 0 chr17 48080716 48080882 -47191769 + B3A SINE B2 8 180 -18 2 951 810 102 0 87 chr17 48080900 48081050 -47191601 + B1_Mur4 SINE Alu 11 147 -3 2 951 946 138 21 0 chr17 48081788 48081933 -47190718 + B1_Mur4 SINE Alu 2 149 -1 2 951 677 148 95 15 chr17 48082002 48082139 -47190512 - B1_Mur3 SINE Alu -1 148 1 2 951 266 286 0 0 chr17 48082205 48082268 -47190383 - RSINE1 SINE B4 -51 114 52 2 951 300 254 45 0 chr17 48082282 48082349 -47190302 - PB1D10 SINE Alu -17 100 31 2 951 1294 34 0 0 chr17 48082494 48082641 -47190010 + B1_Mus2 SINE Alu 1 147 0 2 951 192 40 0 0 chr17 48082641 48082666 -47189985 + (A)n Simple_repeat Simple_repeat 1 25 0 2 951 219 88 0 0 chr17 48082888 48082922 -47189729 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 2 951 697 176 16 0 chr17 48082922 48083047 -47189604 - B1_Mur4 SINE Alu -13 137 11 2 951 455 315 0 39 chr17 48083047 48083077 -47189574 - ID_B1 SINE B4 -13 211 63 2 951 670 190 58 14 chr17 48083417 48083432 -47189219 - B1_Mur2 SINE Alu 0 149 136 2 951 234 0 0 0 chr17 48083432 48083458 -47189193 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 2 951 670 190 58 14 chr17 48083458 48083581 -47189070 - B1_Mur2 SINE Alu -14 135 5 2 951 391 218 123 35 chr17 48083729 48083843 -47188808 - RSINE1 SINE B4 -31 134 11 2 951 445 257 44 9 chr17 48084725 48084839 -47187812 + ID_B1 SINE B4 94 211 -13 2 951 1194 70 0 0 chr17 48084839 48085111 -47187540 + (CA)n Simple_repeat Simple_repeat 1 272 0 2 951 967 128 227 0 chr17 48085307 48085479 -47187172 - B3 SINE B2 -5 211 1 2 951 816 191 0 7 chr17 48085502 48085644 -47187007 + B1F2 SINE Alu 2 142 -7 2 951 473 0 18 0 chr17 48085658 48085715 -47186936 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 2 951 192 135 0 0 chr17 48085745 48085782 -47186869 + (TCTCTG)n Simple_repeat Simple_repeat 4 40 0 2 951 205 161 0 0 chr17 48086121 48086152 -47186499 + (TATG)n Simple_repeat Simple_repeat 3 33 0 2 951 571 257 7 21 chr17 48086163 48086306 -47186345 + ID_B1 SINE B4 84 224 0 2 951 337 286 69 38 chr17 48086331 48086462 -47186189 - L1ME4a LINE L1 -40 6084 5950 2 951 260 241 83 199 chr17 48086521 48086609 -47186042 + ID_B1 SINE B4 55 155 -69 2 951 551 253 178 38 chr17 48086609 48086794 -47185857 + B3 SINE B2 1 211 -5 2 951 260 241 83 199 chr17 48086794 48086886 -47185765 + ID_B1 SINE B4 156 214 -10 2 951 856 121 20 0 chr17 48086886 48087035 -47185616 + (TAGA)n Simple_repeat Simple_repeat 1 152 0 2 951 274 250 11 56 chr17 48087035 48087124 -47185527 + B3A SINE B2 111 195 -3 2 951 616 244 122 34 chr17 48087990 48088194 -47184457 + ID_B1 SINE B4 3 224 0 2 951 215 345 0 22 chr17 48088299 48088391 -47184260 + C-rich Low_complexity Low_complexity 1 90 0 2 951 242 91 0 64 chr17 48088391 48088438 -47184213 + T-rich Low_complexity Low_complexity 1 44 0 2 951 198 103 0 0 chr17 48091460 48091489 -47181162 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 951 548 232 40 0 chr17 48091496 48091621 -47181030 - RSINE1 SINE B4 -33 132 3 2 951 501 265 17 8 chr17 48091621 48091738 -47180913 - B4A SINE B4 -60 232 115 2 951 1595 96 32 0 chr17 48092762 48092980 -47179671 + URR1B DNA MER1_type 1 225 0 2 951 311 214 14 0 chr17 48093241 48093311 -47179340 - ID_B1 SINE B4 -2 222 152 2 951 306 65 48 0 chr17 48093322 48093384 -47179267 + (TTTG)n Simple_repeat Simple_repeat 4 68 0 2 951 1189 48 7 0 chr17 48093384 48093529 -47179122 - B1_Mus1 SINE Alu 0 148 3 2 951 642 185 83 23 chr17 48093533 48093666 -47178985 - B1_Mus1 SINE Alu -2 146 6 2 951 1192 61 0 7 chr17 48093887 48094035 -47178616 + B1_Mm SINE Alu 1 147 0 2 951 885 19 0 0 chr17 48094042 48094145 -47178506 + (GAA)n Simple_repeat Simple_repeat 2 104 0 2 951 229 304 57 38 chr17 48094147 48094162 -47178489 - MT2B LTR ERVL -328 273 167 2 951 286 278 56 0 chr17 48094162 48094252 -47178399 - PB1D9 SINE Alu -23 97 3 2 951 866 218 60 65 chr17 48094287 48094503 -47178148 + B3 SINE B2 1 215 -1 2 951 664 277 69 6 chr17 48094628 48094788 -47177863 + ID_B1 SINE B4 3 172 -52 2 951 423 0 0 0 chr17 48095346 48095393 -47177258 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 951 605 308 54 21 chr17 48096117 48096303 -47176348 + ID_B1 SINE B4 6 197 -27 2 951 721 241 22 33 chr17 48096524 48096704 -47175947 + B4A SINE B4 40 217 -75 2 951 510 254 8 8 chr17 48096706 48096829 -47175822 + ID_B1 SINE B4 101 223 -1 2 951 33 0 0 0 chr17 48096907 48096940 -47175711 + AT_rich Low_complexity Low_complexity 1 33 0 2 951 1241 61 0 0 chr17 48096940 48097088 -47175563 - B1_Mus1 SINE Alu 0 148 1 2 951 400 327 13 26 chr17 48097119 48097273 -47175378 + B4A SINE B4 141 292 0 2 951 268 278 17 17 chr17 48097273 48097452 -47175199 + (CATA)n Simple_repeat Simple_repeat 1 179 0 2 951 855 75 0 17 chr17 48097522 48097672 -47174979 + B2_Mm2 SINE B2 1 141 -75 2 951 180 0 0 0 chr17 48098489 48098509 -47174142 + (T)n Simple_repeat Simple_repeat 1 20 0 2 951 24 0 0 0 chr17 48098565 48098589 -47174062 + AT_rich Low_complexity Low_complexity 1 24 0 2 951 359 311 78 59 chr17 48098590 48098809 -47173842 - ID_B1 SINE B4 0 224 2 2 951 239 320 0 49 chr17 48098823 48098905 -47173746 - ID4 SINE ID -3 80 3 2 951 496 261 0 0 chr17 48098905 48099020 -47173631 - PB1D10 SINE Alu -1 116 2 2 951 505 203 41 100 chr17 48099047 48099226 -47173425 - B3A SINE B2 0 198 4 2 951 289 301 138 66 chr17 48099238 48099307 -47173344 - B3 SINE B2 -3 213 4 2 951 695 165 71 0 chr17 48099307 48099434 -47173217 - RSINE1 SINE B4 -25 140 5 2 951 199 344 82 10 chr17 48099472 48099569 -47173082 - L2 LINE L2 -640 2779 2676 2 951 707 273 35 43 chr17 48099744 48099971 -47172680 + ID_B1 SINE B4 18 241 -51 2 951 590 216 22 0 chr17 48100009 48100143 -47172508 + MER115 DNA Tip100 528 664 -29 2 951 299 309 10 10 chr17 48100589 48100687 -47171964 - RSINE1 SINE B4 -66 99 2 2 951 228 355 0 25 chr17 48100811 48100892 -47171759 + RSINE1 SINE B4 3 81 -84 2 951 474 65 0 0 chr17 48100947 48101009 -47171642 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 951 365 326 0 10 chr17 48101021 48101120 -47171531 - RSINE1 SINE B4 -20 145 48 2 951 2118 119 64 6 chr17 48101125 48101470 -47171181 - ORR1B1 LTR MaLR -8 386 22 2 951 322 256 8 107 chr17 48101495 48101626 -47171025 - PB1D7 SINE Alu 0 120 3 2 951 385 261 11 11 chr17 48101626 48101709 -47170942 + PB1D10 SINE Alu 27 109 -8 2 951 416 331 26 60 chr17 48101718 48101828 -47170823 + ID_B1 SINE B4 79 192 -32 2 951 1906 160 83 33 chr17 48101828 48102191 -47170460 + ORR1C2 LTR MaLR 1 381 -3 2 951 416 331 26 60 chr17 48102191 48102231 -47170420 + ID_B1 SINE B4 193 224 0 2 951 246 275 283 20 chr17 48102273 48102330 -47170321 + ID_B1 SINE B4 32 157 -67 2 951 328 269 0 21 chr17 48102330 48102368 -47170283 + PB1D9 SINE Alu 27 62 -58 2 951 360 0 0 0 chr17 48102368 48102408 -47170243 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 951 246 275 283 20 chr17 48102408 48102464 -47170187 + ID_B1 SINE B4 158 222 -2 2 951 513 235 52 116 chr17 48102471 48102644 -47170007 + B3A SINE B2 1 162 -36 2 951 23 0 0 0 chr17 48102683 48102706 -47169945 + AT_rich Low_complexity Low_complexity 1 23 0 2 951 190 125 42 0 chr17 48102759 48102807 -47169844 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 951 681 66 0 0 chr17 48102836 48102927 -47169724 + (CA)n Simple_repeat Simple_repeat 2 92 0 2 951 260 197 0 32 chr17 48103026 48103089 -47169562 + CT-rich Low_complexity Low_complexity 2 62 0 2 952 469 233 39 0 chr17 48103916 48104019 -47168632 + RSINE1 SINE B4 36 142 -23 2 952 459 194 0 0 chr17 48104075 48104168 -47168483 + (TATATG)n Simple_repeat Simple_repeat 3 95 0 2 952 572 220 181 32 chr17 48104181 48104336 -47168315 - B3A SINE B2 -18 180 3 2 952 373 171 98 0 chr17 48104389 48104471 -47168180 - B1_Mur4 SINE Alu -58 92 3 2 952 564 223 0 16 chr17 48104707 48104830 -47167821 - B1_Mur1 SINE Alu 0 149 29 2 952 259 308 176 19 chr17 48104749 48104908 -47167743 - B4 SINE B4 -94 198 15 2 952 274 269 15 0 chr17 48104876 48104943 -47167708 - B1F1 SINE Alu -74 75 8 2 952 1934 142 61 56 chr17 48104995 48105391 -47167260 + MTD LTR MaLR 12 409 -10 2 952 219 260 0 0 chr17 48105510 48105560 -47167091 - MIRm SINE MIR -143 133 84 2 952 328 323 30 23 chr17 48105567 48105581 -47167070 + ID SINE ID 67 81 -143 2 952 420 289 32 24 chr17 48105581 48105705 -47166946 + B1F SINE Alu 3 127 -22 2 952 396 104 0 0 chr17 48105716 48105783 -47166868 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 2 952 648 26 0 0 chr17 48105783 48105861 -47166790 + (CA)n Simple_repeat Simple_repeat 1 78 0 2 952 610 171 105 8 chr17 48105865 48105989 -47166662 + B1_Mus1 SINE Alu 3 138 -10 2 952 737 161 85 28 chr17 48106347 48106488 -47166163 - B1_Mur1 SINE Alu 0 149 1 2 952 185 123 30 30 chr17 48106493 48106513 -47166138 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 3 952 1133 84 0 0 chr17 48106513 48106655 -47165996 - B1_Mus2 SINE Alu -5 142 1 3 952 185 123 30 30 chr17 48106655 48106701 -47165950 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 3 952 681 207 96 0 chr17 48106723 48106858 -47165793 + B1_Mur4 SINE Alu 2 149 -1 3 952 251 149 15 69 chr17 48106864 48106994 -47165657 + (CAAA)n Simple_repeat Simple_repeat 2 124 0 3 952 290 277 131 28 chr17 48107014 48107159 -47165492 - ID_B1 SINE B4 -15 209 50 3 952 364 296 59 29 chr17 48107208 48107344 -47165307 + B4A SINE B4 1 140 -152 3 952 285 308 206 6 chr17 48107518 48107678 -47164973 + B4A SINE B4 89 280 -12 3 952 315 0 0 0 chr17 48107702 48107737 -47164914 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 952 1531 42 16 16 chr17 48108044 48108237 -47164414 + B2_Mm1a SINE B2 1 193 0 3 952 204 97 0 0 chr17 48108239 48108270 -47164381 + (A)n Simple_repeat Simple_repeat 1 31 0 3 952 364 270 0 0 chr17 48108327 48108416 -47164235 + PB1D10 SINE Alu 28 116 -1 3 952 790 269 90 0 chr17 48108491 48108692 -47163959 + ID_B1 SINE B4 2 220 -4 3 952 569 26 0 38 chr17 48108761 48108841 -47163810 + (TCTA)n Simple_repeat Simple_repeat 2 78 0 3 952 1015 184 0 11 chr17 48109028 48109209 -47163442 - B3 SINE B2 -2 214 36 3 952 464 308 99 57 chr17 48109165 48109336 -47163315 - B4A SINE B4 -18 274 108 3 952 468 0 0 0 chr17 48109336 48109388 -47163263 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 952 464 308 99 57 chr17 48109388 48109478 -47163173 - B4A SINE B4 -185 107 2 3 952 408 254 147 63 chr17 48109688 48109831 -47162820 - RSINE1 SINE B4 -3 162 8 3 952 443 33 0 16 chr17 48109873 48109935 -47162716 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 3 952 327 25 0 0 chr17 48110061 48110101 -47162550 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 952 320 195 353 52 chr17 48110286 48110454 -47162197 - ID_B1 SINE B4 -1 223 5 3 952 27 0 0 0 chr17 48111189 48111216 -47161435 + GC_rich Low_complexity Low_complexity 1 27 0 3 952 318 179 37 19 chr17 48111447 48111555 -47161096 + (CAGA)n Simple_repeat Simple_repeat 1 110 0 3 952 414 0 0 0 chr17 48112580 48112626 -47160025 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 952 23 0 0 0 chr17 48113970 48113993 -47158658 + AT_rich Low_complexity Low_complexity 1 23 0 3 952 657 244 37 54 chr17 48113994 48114216 -47158435 + B3A SINE B2 1 216 0 3 952 1228 55 0 0 chr17 48114216 48114354 -47158297 + B1_Mm SINE Alu 1 138 -9 3 952 317 24 24 0 chr17 48114354 48114396 -47158255 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 952 1137 92 0 0 chr17 48114409 48114551 -47158100 + B1_Mus1 SINE Alu 2 143 -5 3 952 695 230 36 41 chr17 48114556 48114665 -47157986 + B2_Mm2 SINE B2 1 110 -85 3 952 1188 35 14 27 chr17 48114665 48114813 -47157838 - B1_Mus1 SINE Alu 0 148 3 3 952 695 230 36 41 chr17 48114813 48114898 -47157753 + B2_Mm2 SINE B2 111 194 -1 3 952 198 0 0 0 chr17 48115408 48115430 -47157221 + (CAGA)n Simple_repeat Simple_repeat 2 23 0 3 952 625 142 6 230 chr17 48116803 48116977 -47155674 + B1_Mus1 SINE Alu 3 137 -11 3 952 394 269 56 0 chr17 48117061 48117169 -47155482 - MIR SINE MIR -116 146 33 3 952 230 329 27 0 chr17 48117512 48117585 -47155066 + ID2 SINE ID 3 77 -6 3 952 477 0 0 0 chr17 48117599 48117652 -47154999 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 952 330 324 9 18 chr17 48117674 48117784 -47154867 + PB1D10 SINE Alu 1 109 -8 3 952 807 191 0 0 chr17 48117793 48117924 -47154727 + B1_Mur2 SINE Alu 1 131 -18 3 952 367 238 106 53 chr17 48117940 48118091 -47154560 + RSINE1 SINE B4 2 160 -5 3 952 314 291 28 32 chr17 48118182 48118327 -47154324 - MIR SINE MIR -41 227 76 3 952 282 56 0 0 chr17 48119078 48119114 -47153537 + (CAGA)n Simple_repeat Simple_repeat 1 36 0 3 952 1136 143 3 16 chr17 48119156 48119729 -47152922 + (CA)n Simple_repeat Simple_repeat 1 565 0 3 952 1485 236 58 0 chr17 48120417 48120760 -47151891 + ORR1D2 LTR MaLR 8 370 0 3 952 260 380 82 8 chr17 48120950 48121108 -47151543 + MIR SINE MIR 37 206 -62 3 952 312 248 162 34 chr17 48121421 48121538 -47151113 - MER63B DNA AcHobo -28 408 277 3 952 405 271 28 18 chr17 48121733 48121842 -47150809 + PB1D9 SINE Alu 4 113 -7 3 952 1213 82 0 0 chr17 48121851 48121998 -47150653 + B1_Mus2 SINE Alu 1 147 0 3 952 227 54 27 0 chr17 48121999 48122036 -47150615 + (CAAAAA)n Simple_repeat Simple_repeat 3 40 0 3 952 225 154 0 0 chr17 48122057 48122096 -47150555 + (CAA)n Simple_repeat Simple_repeat 1 39 0 3 952 284 302 23 0 chr17 48122120 48122206 -47150445 + B1F2 SINE Alu 33 120 -29 3 952 318 281 53 90 chr17 48122237 48122370 -47150281 + RSINE1 SINE B4 10 137 -28 3 952 455 157 11 0 chr17 48122416 48122505 -47150146 + CT-rich Low_complexity Low_complexity 1 90 0 3 952 501 256 46 8 chr17 48122505 48122635 -47150016 - B1_Mur1 SINE Alu 0 149 15 3 952 216 67 0 0 chr17 48122640 48122670 -47149981 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 3 952 1293 25 0 0 chr17 48122670 48122829 -47149822 - B2_Mm1a SINE B2 -33 160 2 3 952 1075 81 0 0 chr17 48122907 48123055 -47149596 - B2_Mm2 SINE B2 -44 151 4 3 952 310 341 41 12 chr17 48123072 48123244 -47149407 - L2 LINE L2 -781 2638 2462 3 952 664 303 40 35 chr17 48123349 48123551 -47149100 + ID_B1 SINE B4 3 205 -19 3 952 825 287 29 47 chr17 48124315 48124589 -47148062 - B4A SINE B4 -4 288 20 3 952 578 150 47 55 chr17 48124626 48124753 -47147898 - B1F SINE Alu -7 142 17 3 952 653 268 25 80 chr17 48124798 48125037 -47147614 + B4A SINE B4 8 233 -59 3 952 390 74 0 0 chr17 48126280 48126334 -47146317 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 952 836 106 0 63 chr17 48126364 48126555 -47146096 + (TG)n Simple_repeat Simple_repeat 2 180 0 3 952 785 179 21 7 chr17 48126721 48126862 -47145789 + B1_Mur1 SINE Alu 2 144 -5 3 952 381 250 162 8 chr17 48127816 48127933 -47144718 + RSINE1 SINE B4 3 137 -28 3 952 942 35 0 0 chr17 48128008 48128122 -47144529 + (TTCTC)n Simple_repeat Simple_repeat 3 116 0 3 952 672 77 0 0 chr17 48128123 48128214 -47144437 + (TTTC)n Simple_repeat Simple_repeat 2 92 0 3 952 777 296 51 0 chr17 48128217 48128413 -47144238 + B4A SINE B4 83 288 -4 3 952 222 105 0 0 chr17 48128450 48128488 -47144163 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 952 333 0 0 0 chr17 48128773 48128810 -47143841 + (GA)n Simple_repeat Simple_repeat 2 38 0 3 952 331 323 80 6 chr17 48129315 48129477 -47143174 + MIR SINE MIR 14 187 -75 3 952 402 39 0 0 chr17 48130032 48130084 -47142567 + (TATG)n Simple_repeat Simple_repeat 2 53 0 3 952 866 134 29 0 chr17 48130086 48130258 -47142393 + (TCCA)n Simple_repeat Simple_repeat 1 177 0 3 952 198 0 0 0 chr17 48130284 48130306 -47142345 + (CCCA)n Simple_repeat Simple_repeat 3 24 0 3 952 189 0 0 0 chr17 48130309 48130330 -47142321 + (TCTA)n Simple_repeat Simple_repeat 1 21 0 3 952 1110 80 23 0 chr17 48130330 48130505 -47142146 + (TCCA)n Simple_repeat Simple_repeat 2 180 0 3 952 621 239 147 32 chr17 48130513 48130703 -47141948 - ID_B1 SINE B4 -11 213 2 3 952 541 273 8 0 chr17 48130747 48130868 -47141783 + B3 SINE B2 13 134 -82 3 952 549 112 9 109 chr17 48130863 48130943 -47141708 - MTC LTR MaLR -96 325 254 3 952 1289 168 14 0 chr17 48130943 48130980 -47141671 + URR1B DNA MER1_type 1 40 -185 3 952 450 0 0 0 chr17 48130980 48131030 -47141621 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 952 1289 168 14 0 chr17 48131030 48131212 -47141439 + URR1B DNA MER1_type 41 222 -3 3 952 549 112 9 109 chr17 48131212 48131241 -47141410 - MTC LTR MaLR -168 253 227 3 952 238 186 0 0 chr17 48131260 48131303 -47141348 - MT2A LTR ERVL -392 141 99 3 952 938 221 5 21 chr17 48131454 48131648 -47141003 - B3 SINE B2 0 216 26 3 952 516 200 67 0 chr17 48131703 48131808 -47140843 - B1_Mur1 SINE Alu -35 114 3 3 952 309 274 60 34 chr17 48131706 48131823 -47140828 - ID_B1 SINE B4 -35 189 70 3 952 216 91 0 0 chr17 48131858 48131876 -47140775 + (T)n Simple_repeat Simple_repeat 1 18 0 3 952 1242 34 0 13 chr17 48131876 48132025 -47140626 - B1_Mus2 SINE Alu 0 147 1 3 952 216 91 0 0 chr17 48132025 48132039 -47140612 + (T)n Simple_repeat Simple_repeat 1 14 0 3 952 396 0 0 0 chr17 48132103 48132147 -47140504 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 952 627 250 7 0 chr17 48132254 48132394 -47140257 - ID_B1 SINE B4 -1 223 83 3 952 370 280 122 54 chr17 48132394 48132598 -47140053 - L1ME3A LINE L1 -117 6056 5839 3 952 308 260 0 0 chr17 48132637 48132714 -47139937 + (TG)n Simple_repeat Simple_repeat 2 78 0 3 952 253 284 162 102 chr17 48132717 48132952 -47139699 - B4 SINE B4 0 292 44 3 952 316 329 71 13 chr17 48133118 48133272 -47139379 - L1ME3A LINE L1 -532 5641 5479 3 952 1267 119 32 0 chr17 48133363 48133548 -47139103 - B2_Mm1a SINE B2 -1 192 2 3 952 403 208 44 18 chr17 48133615 48133771 -47138880 - B3 SINE B2 -5 211 2 3 952 1810 226 87 16 chr17 48133771 48134198 -47138453 + MT2A LTR ERVL 75 531 -2 3 952 443 285 0 53 chr17 48134261 48134276 -47138375 - ID_B1 SINE B4 -2 222 211 3 952 609 14 0 0 chr17 48134276 48134346 -47138305 + (TC)n Simple_repeat Simple_repeat 1 70 0 3 952 754 164 0 8 chr17 48134350 48134479 -47138172 - B1_Mur2 SINE Alu -21 128 1 3 952 694 296 51 29 chr17 48134522 48134701 -47137950 - L1ME3A LINE L1 -880 5266 5089 3 952 432 0 0 0 chr17 48134701 48134749 -47137902 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 952 694 296 51 29 chr17 48134749 48134885 -47137766 - L1ME3A LINE L1 -1058 5088 4944 3 952 571 254 40 53 chr17 48135299 48135449 -47137202 + ID_B1 SINE B4 69 216 -8 3 952 645 120 28 0 chr17 48135835 48135943 -47136708 + B1_Mus2 SINE Alu 30 140 -7 4 952 402 242 40 10 chr17 48136082 48136182 -47136469 + B4A SINE B4 2 104 -188 4 952 297 0 0 0 chr17 48136215 48136248 -47136403 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 952 195 139 0 0 chr17 48136248 48136284 -47136367 + (GA)n Simple_repeat Simple_repeat 2 37 0 4 952 275 289 120 0 chr17 48136467 48136609 -47136042 - L2b LINE L2 -208 3167 3009 4 952 480 265 109 16 chr17 48136810 48136994 -47135657 + ID_B1 SINE B4 1 201 -23 4 952 311 306 96 32 chr17 48137342 48137467 -47135184 + ID_B1 SINE B4 6 138 -86 4 952 240 216 39 0 chr17 48137513 48137564 -47135087 + ID4 SINE ID 3 55 -28 4 952 204 75 100 0 chr17 48137633 48137673 -47134978 + (CAAAC)n Simple_repeat Simple_repeat 2 45 0 4 952 487 319 27 32 chr17 48137707 48137722 -47134929 - B3A SINE B2 -9 189 176 4 952 306 0 0 0 chr17 48137722 48137756 -47134895 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 4 952 487 319 27 32 chr17 48137756 48137928 -47134723 - B3A SINE B2 -23 175 3 4 952 599 204 8 8 chr17 48137972 48138105 -47134546 + B1_Mur2 SINE Alu 5 144 -5 4 952 364 138 62 0 chr17 48138105 48138185 -47134466 + G-rich Low_complexity Low_complexity 5 89 0 4 952 637 205 95 50 chr17 48138559 48138759 -47133892 - B3 SINE B2 -6 210 2 4 952 667 269 19 6 chr17 48139318 48139475 -47133176 + RSINE1 SINE B4 4 162 -3 4 952 650 208 25 40 chr17 48139909 48140083 -47132568 + ID_B1 SINE B4 76 246 -46 4 952 464 226 66 0 chr17 48140736 48140842 -47131809 + RSINE1 SINE B4 13 125 -40 4 952 441 127 0 0 chr17 48140860 48140939 -47131712 + (CA)n Simple_repeat Simple_repeat 1 79 0 4 952 3318 127 248 7 chr17 48140971 48141564 -47131087 - RMER19A LTR ERVK 0 737 2 4 952 219 170 0 0 chr17 48141975 48142022 -47130629 + (CAGA)n Simple_repeat Simple_repeat 1 47 0 4 952 1404 6 0 43 chr17 48142498 48142686 -47129965 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 4 952 324 0 0 0 chr17 48142949 48142985 -47129666 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 952 540 0 0 0 chr17 48143952 48144012 -47128639 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 952 467 200 101 31 chr17 48144019 48144148 -47128503 - B1_Mur3 SINE Alu -10 139 2 4 952 324 0 0 0 chr17 48144220 48144256 -47128395 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 952 252 0 0 0 chr17 48145239 48145267 -47127384 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 952 189 107 0 0 chr17 48146135 48146163 -47126488 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 4 952 245 306 0 34 chr17 48146678 48146766 -47125885 + PB1D10 SINE Alu 10 94 -23 4 952 763 270 60 13 chr17 48146856 48147089 -47125562 + B4A SINE B4 49 292 0 4 952 444 19 0 0 chr17 48147112 48147165 -47125486 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 952 282 219 0 0 chr17 48147896 48147960 -47124691 + T-rich Low_complexity Low_complexity 1 64 0 4 952 227 325 0 12 chr17 48148021 48148102 -47124549 + C-rich Low_complexity Low_complexity 5 84 0 4 952 495 0 0 0 chr17 48148901 48148956 -47123695 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 952 687 223 0 0 chr17 48149167 48149297 -47123354 + RSINE1 SINE B4 3 132 -33 4 952 279 0 0 0 chr17 48149355 48149386 -47123265 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 952 831 21 0 0 chr17 48149386 48149482 -47123169 + (GA)n Simple_repeat Simple_repeat 1 97 0 4 952 313 250 86 9 chr17 48149483 48149588 -47123063 - MIR SINE MIR -128 134 22 4 952 535 209 52 0 chr17 48150030 48150145 -47122506 - ID_B1 SINE B4 -6 218 98 4 952 226 197 33 0 chr17 48150492 48150553 -47122098 + (CAA)n Simple_repeat Simple_repeat 1 63 0 4 952 251 304 109 0 chr17 48150680 48150818 -47121833 - MIRc SINE MIR -79 189 37 4 952 341 327 41 35 chr17 48150896 48151067 -47121584 + MamRep38 DNA hAT 43 214 -81 4 952 265 250 68 52 chr17 48151103 48151200 -47121451 + PB1D7 SINE Alu 20 123 -26 4 952 1189 62 7 0 chr17 48151200 48151344 -47121307 - B1_Mm SINE Alu 0 147 3 4 952 242 302 62 0 chr17 48151344 48151367 -47121284 + B1F SINE Alu 124 146 -3 4 952 711 207 0 52 chr17 48151374 48151527 -47121124 + B1_Mur1 SINE Alu 4 148 -1 4 952 405 0 0 0 chr17 48151712 48151757 -47120894 + (TC)n Simple_repeat Simple_repeat 2 46 0 4 952 312 250 0 158 chr17 48152466 48152599 -47120052 + MT2B LTR ERVL 153 264 -337 4 952 855 159 0 3 chr17 48152482 48152634 -47120017 + B1_Mur4 SINE Alu 1 150 0 4 952 339 297 145 0 chr17 48152744 48152882 -47119769 + RSINE1 SINE B4 5 162 -3 4 952 234 378 47 34 chr17 48153938 48154086 -47118565 + MIR SINE MIR 112 261 -1 4 952 394 283 71 0 chr17 48154233 48154346 -47118305 - B1_Mur1 SINE Alu -2 147 27 4 952 834 123 0 0 chr17 48154346 48154476 -47118175 + (TTCC)n Simple_repeat Simple_repeat 3 132 0 4 952 232 238 153 59 chr17 48154485 48154570 -47118081 - PB1D10 SINE Alu -20 97 5 4 952 483 18 0 0 chr17 48154598 48154654 -47117997 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 4 952 644 234 70 19 chr17 48154693 48154850 -47117801 - RSINE1 SINE B4 0 165 1 4 952 732 203 0 21 chr17 48155592 48155733 -47116918 + B1_Mus2 SINE Alu 10 147 0 4 952 205 156 0 0 chr17 48155733 48155765 -47116886 + (CAGAA)n Simple_repeat Simple_repeat 1 32 0 4 952 1084 168 56 0 chr17 48155809 48156005 -47116646 + B3 SINE B2 3 209 -7 4 952 465 278 124 7 chr17 48156044 48156189 -47116462 - B3 SINE B2 0 216 55 4 952 905 39 31 0 chr17 48156236 48156366 -47116285 + (GGA)n Simple_repeat Simple_repeat 2 135 0 4 952 522 85 21 11 chr17 48156934 48157029 -47115622 + (GGA)n Simple_repeat Simple_repeat 3 98 0 4 952 195 266 0 0 chr17 48157053 48157117 -47115534 + GA-rich Low_complexity Low_complexity 2 65 0 4 952 222 191 0 0 chr17 48157290 48157337 -47115314 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 952 309 251 52 126 chr17 48157339 48157530 -47115121 + L1M4b LINE L1 2793 2969 -4365 4 952 207 219 0 0 chr17 48157530 48157571 -47115080 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 952 307 184 0 22 chr17 48157616 48157705 -47114946 + (TA)n Simple_repeat Simple_repeat 1 87 0 4 952 974 221 56 5 chr17 48157713 48157909 -47114742 - B3 SINE B2 -6 210 5 4 952 241 321 71 9 chr17 48157919 48158032 -47114619 - B3 SINE B2 0 216 97 4 952 478 270 164 42 chr17 48158386 48158649 -47114002 - MLT1C LTR MaLR -158 309 15 4 952 530 67 13 0 chr17 48161466 48161541 -47111110 + (GGA)n Simple_repeat Simple_repeat 3 78 0 4 952 216 67 0 0 chr17 48161539 48161569 -47111082 + (CGA)n Simple_repeat Simple_repeat 2 31 0 4 952 222 338 0 0 chr17 48162012 48162086 -47110565 + (TATG)n Simple_repeat Simple_repeat 4 77 0 4 952 394 316 51 106 chr17 48162449 48162573 -47110078 + B4A SINE B4 2 205 -87 4 952 613 144 102 0 chr17 48162573 48162691 -47109960 + B1_Mus2 SINE Alu 18 147 0 4 952 394 316 51 106 chr17 48162691 48162722 -47109929 + B4A SINE B4 206 259 -33 4 952 243 0 0 0 chr17 48162732 48162759 -47109892 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 952 435 228 69 0 chr17 48162806 48162907 -47109744 + B4 SINE B4 164 271 -21 4 952 321 118 0 0 chr17 48162927 48162978 -47109673 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 952 352 342 151 34 chr17 48163601 48163958 -47108693 - L2a LINE L2 -35 3391 2993 4 952 681 236 66 71 chr17 48164048 48164244 -47108407 + B3A SINE B2 4 198 0 4 952 461 259 75 86 chr17 48164385 48164571 -47108080 + B4A SINE B4 109 292 0 4 952 284 316 80 106 chr17 48164704 48165054 -47107597 - MLT1G LTR MaLR -103 452 112 4 952 414 295 91 23 chr17 48165142 48165359 -47107292 - MIR SINE MIR 0 268 33 4 952 839 201 0 32 chr17 48165474 48165659 -47106992 - B3 SINE B2 -2 214 36 4 952 351 0 0 0 chr17 48165659 48165698 -47106953 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 4 952 507 33 0 0 chr17 48165698 48165758 -47106893 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 4 952 902 173 0 0 chr17 48165761 48165894 -47106757 - B1_Mur3 SINE Alu -16 133 1 4 952 1001 183 57 70 chr17 48166699 48166928 -47105723 - URR1A DNA MER1_type 0 226 1 4 952 278 291 38 12 chr17 48167347 48167427 -47105224 - ID4_ SINE ID -1 82 1 4 952 553 217 74 8 chr17 48167427 48167548 -47105103 - ID_B1 SINE B4 -3 221 93 4 952 426 280 8 0 chr17 48167588 48167706 -47104945 - PB1D7 SINE Alu -1 119 1 4 952 186 43 0 0 chr17 48168208 48168231 -47104420 + (A)n Simple_repeat Simple_repeat 1 23 0 4 952 565 275 45 5 chr17 48169115 48169316 -47103335 - B3 SINE B2 -7 209 1 4 952 368 252 36 27 chr17 48169328 48169438 -47103213 - PB1D9 SINE Alu -8 112 2 4 952 1069 62 0 46 chr17 48169533 48169685 -47102966 + B1_Mm SINE Alu 3 147 0 4 952 219 88 0 0 chr17 48169932 48169966 -47102685 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 4 952 653 233 23 0 chr17 48169966 48170099 -47102552 - B1_Mur2 SINE Alu -13 136 1 4 952 442 324 7 39 chr17 48170099 48170120 -47102531 - ID_B1 SINE B4 -13 211 63 4 952 389 326 40 13 chr17 48172242 48172391 -47100260 + MLT1J LTR MaLR 247 399 -113 4 952 470 240 96 39 chr17 48172425 48172581 -47100070 - RSINE1 SINE B4 0 165 1 4 952 233 254 0 0 chr17 48172814 48172869 -47099782 + G-rich Low_complexity Low_complexity 5 59 0 4 952 475 253 40 1 chr17 48173261 48173421 -47099230 + L1MC3 LINE L1 6878 7098 -944 4 952 574 194 19 0 chr17 48173485 48173588 -47099063 + ID_B1 SINE B4 102 206 -18 4 952 243 262 0 16 chr17 48173624 48173686 -47098965 + MIR SINE MIR 161 221 -41 5 952 256 229 14 14 chr17 48174367 48174438 -47098213 + CT-rich Low_complexity Low_complexity 1 71 0 5 952 486 259 8 33 chr17 48174715 48174835 -47097816 - PB1D10 SINE Alu 0 117 1 5 952 276 154 0 0 chr17 48175041 48175093 -47097558 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 952 256 370 0 0 chr17 48175530 48175603 -47097048 - PB1D10 SINE Alu -8 109 37 5 952 406 237 30 30 chr17 48175716 48175816 -47096835 - PB1D10 SINE Alu 0 117 18 5 952 277 306 121 34 chr17 48176231 48176380 -47096271 + MIRb SINE MIR 80 241 -27 5 952 360 274 0 12 chr17 48176889 48176974 -47095677 + RSINE1 SINE B4 35 118 -47 5 952 207 0 0 0 chr17 48177011 48177034 -47095617 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 952 360 0 0 0 chr17 48177263 48177303 -47095348 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 952 283 270 108 74 chr17 48178507 48178655 -47093996 - MIRc SINE MIR -94 174 22 5 952 200 269 209 0 chr17 48178704 48178771 -47093880 + MIR3 SINE MIR 76 156 -52 5 952 180 255 137 0 chr17 48179227 48179278 -47093373 + MIR3 SINE MIR 13 70 -138 5 952 207 349 39 67 chr17 48179348 48179526 -47093125 + L2 LINE L2 2413 2585 -834 5 952 587 276 31 0 chr17 48179614 48179798 -47092853 - B3A SINE B2 -27 189 2 5 952 452 239 148 7 chr17 48180050 48180185 -47092466 - ID_B1 SINE B4 -19 205 52 5 952 1063 133 32 43 chr17 48180196 48180384 -47092267 - B2_Mm2 SINE B2 -1 194 9 5 952 2444 137 52 38 chr17 48180453 48180900 -47091751 + RMER6B LTR ERVK 1 453 -8 5 952 468 0 0 0 chr17 48180900 48180952 -47091699 + (CAA)n Simple_repeat Simple_repeat 2 53 0 5 952 609 84 126 0 chr17 48181269 48181364 -47091287 + B1_Mus1 SINE Alu 40 146 -2 5 952 506 271 109 46 chr17 48181384 48181558 -47091093 - ID_B1 SINE B4 -23 201 17 5 952 584 204 15 8 chr17 48181867 48182347 -47090304 + (TCCA)n Simple_repeat Simple_repeat 1 483 0 5 952 240 350 22 50 chr17 48182433 48182577 -47090074 + MIR SINE MIR 30 179 -89 5 952 568 198 325 6 chr17 48183158 48183321 -47089330 - ID_B1 SINE B4 -7 217 3 5 952 387 281 106 83 chr17 48184287 48184504 -47088147 + MIR SINE MIR 27 248 -14 5 952 296 331 73 33 chr17 48185955 48186105 -47086546 - MIR SINE MIR -4 258 103 5 952 556 280 117 33 chr17 48186117 48186331 -47086320 + B4A SINE B4 1 232 -60 5 952 29 0 0 0 chr17 48186846 48186875 -47085776 + AT_rich Low_complexity Low_complexity 1 29 0 5 952 204 102 20 39 chr17 48186875 48186926 -47085725 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 952 510 274 38 32 chr17 48186932 48187090 -47085561 - B3 SINE B2 -10 206 48 5 952 488 213 8 0 chr17 48187131 48187253 -47085398 + (TG)n Simple_repeat Simple_repeat 1 123 0 5 952 894 200 47 0 chr17 48187253 48187423 -47085228 - B3A SINE B2 -16 182 5 5 952 402 256 114 23 chr17 48187871 48188003 -47084648 + ID_B1 SINE B4 70 213 -11 5 952 699 250 65 0 chr17 48188369 48188537 -47084114 + ID_B1 SINE B4 40 218 -6 5 952 191 72 139 23 chr17 48188582 48188625 -47084026 + L4 LINE RTE 842 889 -1140 5 952 421 250 50 106 chr17 48189144 48189305 -47083346 + RMER30 DNA MER1_type 10 161 -41 5 952 431 275 0 66 chr17 48189162 48189314 -47083337 - Charlie12 DNA MER1_type -2698 175 34 5 952 387 0 0 0 chr17 48189582 48189625 -47083026 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 952 435 38 0 0 chr17 48189625 48189677 -47082974 + (GA)n Simple_repeat Simple_repeat 1 53 0 5 952 282 179 0 0 chr17 48189733 48189789 -47082862 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 952 234 236 36 0 chr17 48190036 48190091 -47082560 - B3 SINE B2 -6 210 154 5 952 986 208 25 15 chr17 48190197 48190397 -47082254 - B3 SINE B2 -14 202 1 5 952 252 0 0 0 chr17 48190404 48190432 -47082219 + (T)n Simple_repeat Simple_repeat 1 28 0 5 952 258 231 62 0 chr17 48190436 48190501 -47082150 - B1F1 SINE Alu -65 84 16 5 952 381 198 0 0 chr17 48190549 48190635 -47082016 + (TA)n Simple_repeat Simple_repeat 1 86 0 5 952 200 217 0 0 chr17 48190662 48190708 -47081943 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 952 1111 200 19 0 chr17 48190711 48190916 -47081735 - B3 SINE B2 -6 210 2 5 952 631 96 0 28 chr17 48190920 48191027 -47081624 + (TTCA)n Simple_repeat Simple_repeat 2 105 0 5 952 316 163 0 0 chr17 48191034 48191083 -47081568 - RSINE1 SINE B4 -30 135 87 5 952 196 305 95 24 chr17 48191536 48191620 -47081031 + MIRm SINE MIR 115 204 -72 5 952 281 247 26 13 chr17 48191740 48191818 -47080833 + CT-rich Low_complexity Low_complexity 2 80 0 5 952 378 0 0 0 chr17 48192471 48192513 -47080138 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 952 1281 7 0 13 chr17 48192793 48192944 -47079707 - ORR1A0 LTR MaLR -28 318 170 5 952 186 43 0 0 chr17 48193220 48193243 -47079408 + (GAAA)n Simple_repeat Simple_repeat 4 26 0 5 952 626 233 45 0 chr17 48193452 48193585 -47079066 + B1F SINE Alu 6 144 -5 5 952 279 304 42 21 chr17 48193602 48193772 -47078879 + B1F SINE Alu 2 311 0 5 952 31 44 0 0 chr17 48193772 48193817 -47078834 + AT_rich Low_complexity Low_complexity 1 45 0 5 952 256 312 0 106 chr17 48195568 48195672 -47076979 + L2c LINE L2 3295 3387 0 5 952 1317 111 11 0 chr17 48195711 48195901 -47076750 + B2_Mm1t SINE B2 1 192 -1 5 952 283 326 73 40 chr17 48196210 48196360 -47076291 + MIR3 SINE MIR 34 188 -20 5 952 1186 70 0 0 chr17 48196690 48196832 -47075819 - B1_Mus2 SINE Alu -4 143 2 5 952 1661 32 0 0 chr17 48196950 48197140 -47075511 - B2_Mm1a SINE B2 -2 191 2 5 952 833 143 23 0 chr17 48197200 48197333 -47075318 + B1_Mur2 SINE Alu 2 137 -12 5 952 276 77 0 0 chr17 48197333 48197372 -47075279 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 5 952 29 0 0 0 chr17 48197875 48197904 -47074747 + AT_rich Low_complexity Low_complexity 1 29 0 5 952 527 224 58 39 chr17 48197910 48198078 -47074573 + B3 SINE B2 5 184 -9 5 952 440 18 18 0 chr17 48198172 48198229 -47074422 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 5 952 600 196 0 9 chr17 48198234 48198342 -47074309 - PB1D9 SINE Alu -13 107 1 5 952 26 30 0 0 chr17 48198349 48198382 -47074269 + AT_rich Low_complexity Low_complexity 1 33 0 5 952 728 264 0 37 chr17 48198388 48198577 -47074074 - B3A SINE B2 -16 182 1 5 952 362 323 84 48 chr17 48198692 48198858 -47073793 + MER20 DNA MER1_type 29 200 -19 5 952 226 284 14 29 chr17 48199064 48199133 -47073518 + MIRb SINE MIR 136 203 -65 5 952 636 14 0 0 chr17 48200011 48200084 -47072567 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 5 952 894 142 0 36 chr17 48200084 48200223 -47072428 - B1_Mus1 SINE Alu -14 134 1 5 952 470 278 0 9 chr17 48200496 48200605 -47072046 - PB1D9 SINE Alu -7 113 6 5 952 384 22 0 0 chr17 48201800 48201845 -47070806 + (GA)n Simple_repeat Simple_repeat 2 46 0 5 952 316 294 0 21 chr17 48202505 48202599 -47070052 - ID_B1 SINE B4 -128 96 5 5 952 337 265 60 2 chr17 48203262 48203379 -47069272 - MIRb SINE MIR -28 180 53 5 952 775 170 56 14 chr17 48203382 48203525 -47069126 + B1_Mur1 SINE Alu 1 149 0 5 952 197 159 23 0 chr17 48203597 48203641 -47069010 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 5 952 321 47 0 0 chr17 48203643 48203686 -47068965 + (TCTCTG)n Simple_repeat Simple_repeat 4 46 0 5 952 213 39 0 0 chr17 48203686 48203711 -47068940 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 952 225 0 0 0 chr17 48203711 48203735 -47068916 + (GA)n Simple_repeat Simple_repeat 1 25 0 5 952 491 219 0 68 chr17 48203738 48203841 -47068810 - B4A SINE B4 -78 214 119 5 952 369 0 0 0 chr17 48203845 48203886 -47068765 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 952 531 285 29 7 chr17 48203904 48204042 -47068609 - B3A SINE B2 -56 142 2 5 952 454 256 0 11 chr17 48205123 48205305 -47067346 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 952 675 253 70 12 chr17 48205315 48205487 -47067164 - B3A SINE B2 -16 182 1 5 952 717 288 22 104 chr17 48205518 48205836 -47066815 + B4 SINE B4 1 292 0 5 952 306 250 18 0 chr17 48205837 48206005 -47066646 + (CA)n Simple_repeat Simple_repeat 2 172 0 5 952 434 207 11 11 chr17 48206018 48206194 -47066457 + (CA)n Simple_repeat Simple_repeat 2 177 0 5 952 288 280 3 0 chr17 48206354 48206435 -47066216 + B1_Mur2 SINE Alu 60 144 -5 5 952 499 173 0 18 chr17 48206435 48206547 -47066104 + GA-rich Low_complexity Low_complexity 1 110 0 5 952 874 164 15 0 chr17 48206769 48206903 -47065748 - B1_Mur3 SINE Alu -13 136 1 5 952 220 213 130 26 chr17 48207071 48207148 -47065503 + B4 SINE B4 3 87 -205 5 952 332 288 32 70 chr17 48207622 48207779 -47064872 - L1MA6 LINE L1 -6 6294 6144 5 952 578 285 0 14 chr17 48207815 48207961 -47064690 - B4 SINE B4 -2 290 147 5 952 827 85 0 41 chr17 48207944 48208067 -47064584 - ORR1A3 LTR MaLR -208 118 1 5 952 350 295 9 54 chr17 48208067 48208156 -47064495 - B4 SINE B4 -204 88 5 5 952 262 211 18 0 chr17 48208202 48208259 -47064392 - L1MA6 LINE L1 -231 6069 6012 5 952 718 238 112 0 chr17 48208300 48208460 -47064191 - B3A SINE B2 -18 180 3 5 952 1279 194 265 32 chr17 48208461 48208801 -47063850 - RMER19C LTR ERVK -192 419 1 5 952 457 220 11 21 chr17 48208802 48208895 -47063756 - B3 SINE B2 -124 92 1 5 952 4470 12 2 2 chr17 48209171 48209664 -47062987 + MT2_Mm LTR ERVL 1 493 0 5 952 28176 11 22 2 chr17 48209664 48212963 -47059688 + MERVL-int LTR ERVL 1 3364 -2121 5 952 399 167 46 35 chr17 48215858 48215945 -47056706 + ORR1A3-int LTR MaLR 553 640 -1323 6 952 305 0 0 0 chr17 48215945 48215983 -47056668 + MERVL-int LTR ERVL 5448 5485 0 5 952 4503 12 2 0 chr17 48215983 48216475 -47056176 + MT2_Mm LTR ERVL 1 493 0 5 952 784 250 14 0 chr17 48216586 48216734 -47055917 + RSINE1 SINE B4 3 152 -13 6 952 243 320 58 68 chr17 48216734 48216777 -47055874 + B2_Mm1t SINE B2 2 190 -3 6 952 913 192 62 29 chr17 48216784 48216993 -47055658 + B3 SINE B2 1 216 0 6 952 1633 167 7 36 chr17 48217657 48217962 -47054689 + ORR1D1 LTR MaLR 1 296 -78 6 952 897 287 26 22 chr17 48218948 48219215 -47053436 + Charlie4 DNA MER1_type 48 315 -1646 6 952 400 299 93 16 chr17 48219539 48219668 -47052983 - MLT1J-int LTR MaLR -339 1048 910 6 952 647 264 7 0 chr17 48219764 48219904 -47052747 - ID_B1 SINE B4 0 224 84 6 952 751 204 42 9 chr17 48220016 48220198 -47052453 - B3 SINE B2 0 198 1 6 952 326 91 0 18 chr17 48220198 48220254 -47052397 + (TTTA)n Simple_repeat Simple_repeat 1 55 0 6 952 1036 116 0 33 chr17 48220254 48220406 -47052245 - B1_Mus1 SINE Alu -1 147 1 6 952 201 74 0 0 chr17 48220432 48220459 -47052192 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 6 952 962 4 13 61 chr17 48220463 48220692 -47051959 + (TG)n Simple_repeat Simple_repeat 1 217 0 6 952 543 252 8 25 chr17 48220705 48220827 -47051824 - RSINE1 SINE B4 -44 121 2 6 952 966 168 0 13 chr17 48220943 48221094 -47051557 - B1_Mur4 SINE Alu -1 149 1 6 952 478 288 76 0 chr17 48221122 48221254 -47051397 - RSINE1 SINE B4 -15 150 9 6 952 220 246 77 0 chr17 48221352 48221417 -47051234 - B3 SINE B2 -140 76 7 6 952 346 248 153 37 chr17 48221587 48221746 -47050905 + MLT1B LTR MaLR 1 178 -212 6 952 674 276 19 13 chr17 48221746 48221904 -47050747 + B3A SINE B2 2 160 -38 6 952 360 0 0 0 chr17 48221907 48221947 -47050704 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 952 31 68 0 0 chr17 48221969 48222028 -47050623 + AT_rich Low_complexity Low_complexity 1 59 0 6 952 707 197 31 16 chr17 48222045 48222174 -47050477 + B1_Mur2 SINE Alu 6 136 -13 6 952 180 0 0 0 chr17 48222174 48222194 -47050457 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 6 952 21 36 0 0 chr17 48222433 48222461 -47050190 + AT_rich Low_complexity Low_complexity 1 28 0 6 952 659 191 0 0 chr17 48222789 48222904 -47049747 + B3 SINE B2 8 122 -94 6 952 459 0 0 0 chr17 48222925 48222976 -47049675 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 952 1366 88 28 6 chr17 48222986 48223168 -47049483 + B2_Mm2 SINE B2 1 186 -9 6 952 588 282 7 40 chr17 48223183 48223331 -47049320 + ID_B1 SINE B4 82 224 0 6 952 921 173 0 0 chr17 48223346 48223496 -47049155 + B1_Mur4 SINE Alu 1 150 0 6 952 498 271 35 14 chr17 48223557 48223578 -47049073 + B1_Mus1 SINE Alu 4 146 0 6 952 727 151 8 0 chr17 48223578 48223697 -47048954 + ID_B1 SINE B4 105 224 0 6 952 569 276 102 39 chr17 48223998 48224254 -47048397 + B4A SINE B4 2 273 -19 6 952 4023 75 62 2 chr17 48224478 48225013 -47047638 + RMER2 LTR ERV1 1 567 0 6 952 427 314 106 89 chr17 48225481 48225652 -47046999 + MLT1C LTR MaLR 55 249 -218 6 952 1386 244 46 27 chr17 48225652 48226022 -47046629 - MTE2a LTR MaLR 0 379 3 6 952 413 188 310 71 chr17 48226023 48226178 -47046473 + B3A SINE B2 2 193 -5 6 952 427 314 106 89 chr17 48226178 48226410 -47046241 + MLT1C LTR MaLR 250 465 -2 6 952 558 0 0 0 chr17 48227081 48227143 -47045508 + (TCTA)n Simple_repeat Simple_repeat 2 63 0 6 952 189 147 0 0 chr17 48227143 48227177 -47045474 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 6 952 644 229 87 82 chr17 48227845 48228040 -47044611 - B3A SINE B2 -2 196 1 6 952 377 234 43 43 chr17 48228047 48228163 -47044488 - ID_B1 SINE B4 -10 214 99 6 952 341 198 12 0 chr17 48228527 48228608 -47044043 + CT-rich Low_complexity Low_complexity 1 82 0 6 952 280 265 29 0 chr17 48228620 48228688 -47043963 - ID_B1 SINE B4 -2 222 153 6 952 337 224 116 24 chr17 48228907 48229078 -47043573 - B4A SINE B4 -14 278 39 6 952 369 0 0 0 chr17 48229198 48229239 -47043412 + (TTA)n Simple_repeat Simple_repeat 2 42 0 6 952 966 222 15 5 chr17 48229240 48229439 -47043212 - B3 SINE B2 -15 201 1 6 952 853 233 17 6 chr17 48229617 48229794 -47042857 + B3 SINE B2 5 183 -33 6 952 422 300 116 18 chr17 48229894 48230006 -47042645 - PB1D10 SINE Alu -3 124 2 6 952 279 209 17 9 chr17 48230047 48230163 -47042488 + (TG)n Simple_repeat Simple_repeat 2 118 0 6 952 446 247 122 122 chr17 48230168 48230348 -47042303 - B3A SINE B2 -16 182 3 6 952 829 218 24 15 chr17 48230485 48230690 -47041961 - B3 SINE B2 -5 211 5 6 952 453 228 53 0 chr17 48231219 48231330 -47041321 + B3 SINE B2 22 153 -45 6 952 324 0 0 0 chr17 48231339 48231375 -47041276 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 952 202 278 37 0 chr17 48231993 48232047 -47040604 - L2c LINE L2 -66 3321 3266 6 952 25 0 0 0 chr17 48232557 48232582 -47040069 + AT_rich Low_complexity Low_complexity 1 25 0 6 952 396 0 0 0 chr17 48233204 48233248 -47039403 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 952 225 0 0 0 chr17 48234155 48234180 -47038471 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 6 953 21 36 0 0 chr17 48235014 48235042 -47037609 + GC_rich Low_complexity Low_complexity 1 28 0 6 953 515 16 16 0 chr17 48235836 48235900 -47036751 + (GA)n Simple_repeat Simple_repeat 1 65 0 6 953 228 172 0 0 chr17 48236002 48236060 -47036591 + CT-rich Low_complexity Low_complexity 2 59 0 6 953 641 155 10 45 chr17 48236080 48236212 -47036439 - B1_Mur2 SINE Alu -16 134 1 6 953 219 69 0 0 chr17 48237182 48237211 -47035440 + (TGGGGG)n Simple_repeat Simple_repeat 4 32 0 6 953 597 261 14 0 chr17 48238465 48238607 -47034044 - B1_Mur1 SINE Alu 0 149 6 6 953 291 217 56 19 chr17 48238738 48238846 -47033805 + L1MD LINE L1 5643 5754 -605 6 953 680 280 7 7 chr17 48239203 48239354 -47033297 - RSINE1 SINE B4 -12 153 3 6 953 451 167 0 0 chr17 48239492 48239564 -47033087 - B1_Mur2 SINE Alu 0 149 78 6 953 246 289 73 99 chr17 48239563 48239755 -47032896 - MER45C DNA Tip100 -530 423 237 6 953 360 292 27 39 chr17 48239955 48240083 -47032568 - PB1D10 SINE Alu -21 127 1 6 953 262 307 0 22 chr17 48240113 48240203 -47032448 - MTEa LTR MaLR -14 365 278 6 953 978 53 13 7 chr17 48240287 48240438 -47032213 + (CA)n Simple_repeat Simple_repeat 1 152 0 6 953 398 324 58 65 chr17 48240481 48240636 -47032015 - MTEa LTR MaLR -219 160 7 6 953 534 187 18 27 chr17 48240732 48240842 -47031809 - RSINE1 SINE B4 -39 126 18 6 953 777 274 79 9 chr17 48241078 48241306 -47031345 + MTEa LTR MaLR 1 244 -135 6 953 713 221 20 20 chr17 48241393 48241541 -47031110 + MTEa LTR MaLR 232 379 0 6 953 914 176 0 0 chr17 48241591 48241739 -47030912 - B1_Mur2 SINE Alu -1 148 1 6 953 396 294 33 33 chr17 48242201 48242463 -47030188 - L1M5 LINE L1 -590 5584 5320 6 953 331 320 86 26 chr17 48242602 48242753 -47029898 + ID_B1 SINE B4 24 183 -41 6 953 252 59 0 0 chr17 48243889 48243923 -47028728 + (A)n Simple_repeat Simple_repeat 1 34 0 6 953 554 220 8 17 chr17 48244197 48244317 -47028334 + B1_Mur1 SINE Alu 9 127 -22 6 953 486 49 0 0 chr17 48244330 48244391 -47028260 + (GA)n Simple_repeat Simple_repeat 2 62 0 6 953 369 0 0 0 chr17 48244719 48244760 -47027891 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 953 197 356 11 44 chr17 48245400 48245491 -47027160 - L2 LINE L2 -2204 1215 1128 6 953 1046 243 120 0 chr17 48245929 48246188 -47026463 + B4 SINE B4 1 290 -2 6 953 1201 143 101 0 chr17 48246429 48246638 -47026013 + MTC LTR MaLR 1 230 -191 6 953 324 0 0 0 chr17 48246770 48246806 -47025845 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 953 1265 41 0 13 chr17 48246937 48247086 -47025565 + B1_Mm SINE Alu 1 147 0 6 953 230 140 40 0 chr17 48247086 48247136 -47025515 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 6 953 352 243 0 0 chr17 48247512 48247582 -47025069 + ID_B1 SINE B4 148 217 -7 6 953 746 195 84 7 chr17 48247596 48247751 -47024900 + B3A SINE B2 8 174 -24 6 953 778 172 30 7 chr17 48249324 48249459 -47023192 - B1_Mus1 SINE Alu 0 148 11 6 953 702 186 76 29 chr17 48249474 48249646 -47023005 - B2_Mm2 SINE B2 -14 181 2 6 953 1741 161 76 20 chr17 48250424 48250778 -47021873 + ORR1D1 LTR MaLR 1 374 0 6 953 377 192 0 152 chr17 48250965 48251043 -47021608 + B4 SINE B4 9 79 -213 6 953 2011 159 23 82 chr17 48251043 48251366 -47021285 - ORR1B2 LTR MaLR 0 367 55 6 953 1511 53 37 0 chr17 48251366 48251554 -47021097 - B2_Mm2 SINE B2 0 195 1 6 953 2011 159 23 82 chr17 48251554 48251620 -47021031 - ORR1B2 LTR MaLR -313 54 1 6 953 377 192 0 152 chr17 48251620 48251633 -47021018 + B4 SINE B4 80 86 -206 6 953 793 250 27 38 chr17 48251678 48251861 -47020790 + B4 SINE B4 108 288 -4 6 953 209 155 17 0 chr17 48251889 48251947 -47020704 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 953 876 279 12 71 chr17 48251950 48252205 -47020446 + B4 SINE B4 49 288 -4 6 953 591 211 0 66 chr17 48252451 48252573 -47020078 - B1_Mur2 SINE Alu -6 143 30 6 953 370 260 159 61 chr17 48252592 48252887 -47019764 + Charlie10 DNA MER1_type 1765 2088 -734 6 953 647 232 89 20 chr17 48252902 48253104 -47019547 - B3 SINE B2 0 216 1 6 953 357 24 0 0 chr17 48253200 48253242 -47019409 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 953 228 311 54 0 chr17 48253242 48253316 -47019335 - ID4_ SINE ID -1 82 5 6 953 23 0 0 0 chr17 48253469 48253492 -47019159 + AT_rich Low_complexity Low_complexity 1 23 0 6 953 380 260 0 0 chr17 48253654 48253758 -47018893 + (TG)n Simple_repeat Simple_repeat 2 105 0 7 953 2165 223 42 95 chr17 48253807 48254452 -47018199 - RMER19C LTR ERVK 0 611 1 7 953 446 262 193 26 chr17 48256517 48256709 -47015942 + ID_B1 SINE B4 1 224 0 7 953 210 227 0 0 chr17 48257100 48257144 -47015507 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 953 426 174 22 34 chr17 48257144 48257233 -47015418 + MTE2a LTR MaLR 262 349 -30 7 953 1184 68 0 0 chr17 48257243 48257390 -47015261 - B1_Mus1 SINE Alu -1 147 1 7 953 198 0 0 0 chr17 48257417 48257439 -47015212 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 7 953 1278 120 159 40 chr17 48257465 48257717 -47014934 - RLTR27 LTR ERVK -27 282 1 7 953 296 247 27 73 chr17 48258003 48258139 -47014512 + MIRb SINE MIR 120 253 -15 7 953 720 244 81 0 chr17 48258147 48258307 -47014344 + ID_B1 SINE B4 6 178 -46 7 953 189 74 0 0 chr17 48258368 48258395 -47014256 + (TTTAG)n Simple_repeat Simple_repeat 3 29 0 7 953 866 184 0 7 chr17 48258395 48258537 -47014114 - B1_Mus2 SINE Alu -6 141 1 7 953 2322 84 19 3 chr17 48258590 48258912 -47013739 - ORR1A2 LTR MaLR 0 327 1 7 953 458 277 0 0 chr17 48258967 48259061 -47013590 + PB1D10 SINE Alu 24 117 0 7 953 255 161 0 0 chr17 48259108 48259164 -47013487 + (CCAA)n Simple_repeat Simple_repeat 2 57 0 7 953 531 224 130 37 chr17 48259264 48259426 -47013225 + B3A SINE B2 5 181 -17 7 953 639 133 19 49 chr17 48259464 48259613 -47013038 - RMER19C LTR ERVK -402 209 1 7 953 2766 290 37 27 chr17 48259763 48260344 -47012307 - Lx7 LINE L1 -1688 5956 5348 7 953 796 205 5 101 chr17 48260344 48260561 -47012090 + B3A SINE B2 3 198 0 7 953 2766 302 41 51 chr17 48260561 48261230 -47011421 - Lx7 LINE L1 -533 5347 4721 7 953 1301 175 47 174 chr17 48261230 48261700 -47010951 - RMER17C LTR ERVK 0 410 1 7 953 2766 302 41 51 chr17 48261700 48261989 -47010662 - Lx7 LINE L1 -1160 4720 4427 7 953 732 324 70 35 chr17 48262016 48262272 -47010379 - B4 SINE B4 -13 279 15 7 953 456 270 101 104 chr17 48262292 48262639 -47010012 + RLTR15 LTR ERVK 1 346 -13 7 953 1830 188 189 5 chr17 48263216 48263591 -47009060 + RLTR41 LTR ERV1 1 444 -2 7 953 1523 207 81 104 chr17 48264343 48264704 -47007947 - RMER16 LTR ERVK 0 533 175 7 953 3251 82 53 2 chr17 48264704 48265155 -47007496 + MT2C_Mm LTR ERVL 1 474 -1 7 953 1523 222 72 131 chr17 48265155 48265258 -47007393 - RMER16 LTR ERVK -359 174 1 7 953 194 0 39 0 chr17 48265890 48265916 -47006735 + (GA)n Simple_repeat Simple_repeat 2 28 0 7 953 755 273 14 81 chr17 48266637 48266848 -47005803 - B3A SINE B2 0 198 2 7 953 238 270 122 0 chr17 48267038 48267112 -47005539 + ID4 SINE ID 1 83 0 7 953 226 179 0 0 chr17 48267079 48267118 -47005533 + BC1_Mm scRNA scRNA 49 87 -65 7 953 207 319 34 8 chr17 48267203 48267320 -47005331 + (TCCA)n Simple_repeat Simple_repeat 2 121 0 7 953 249 319 14 0 chr17 48267587 48267659 -47004992 + ID4 SINE ID 3 75 -8 7 953 438 108 0 0 chr17 48267661 48267726 -47004925 + (CAA)n Simple_repeat Simple_repeat 2 66 0 7 953 521 191 151 0 chr17 48267891 48268017 -47004634 + B1_Mur3 SINE Alu 5 149 0 7 953 1812 205 54 107 chr17 48269586 48270127 -47002524 - RLTR18B LTR ERVK 0 512 1 7 953 321 353 39 0 chr17 48270159 48270261 -47002390 + PB1D7 SINE Alu 13 118 -2 7 953 228 264 0 22 chr17 48270409 48270498 -47002153 + (TAGA)n Simple_repeat Simple_repeat 1 87 0 7 953 1990 200 18 0 chr17 48270507 48270914 -47001737 + RLTR20D LTR ERVK 1 464 -104 7 953 342 0 0 0 chr17 48270914 48270952 -47001699 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 953 1005 217 57 0 chr17 48270952 48271044 -47001607 + RLTR20D LTR ERVK 465 567 -1 7 953 557 28 14 0 chr17 48271055 48271126 -47001525 + (TAGA)n Simple_repeat Simple_repeat 3 74 0 7 953 522 58 0 0 chr17 48271188 48271257 -47001394 + L1_Mus1 LINE L1 6311 6379 -188 7 953 233 353 10 19 chr17 48272373 48272477 -47000174 + LTR33A LTR ERVL 416 518 -2 7 953 688 256 11 38 chr17 48272592 48272775 -46999876 + B3A SINE B2 5 182 -16 7 953 234 274 96 0 chr17 48273031 48273104 -46999547 - ID2 SINE ID -1 82 3 7 953 234 229 21 0 chr17 48273039 48273087 -46999564 - tRNA-Ala-GCY_ tRNA tRNA -7 68 20 7 953 217 262 22 130 chr17 48273087 48273124 -46999527 - ID SINE ID -141 72 2 7 953 807 222 77 10 chr17 48273210 48273406 -46999245 - B3 SINE B2 0 216 8 7 953 681 159 0 18 chr17 48276710 48276819 -46995832 + B1_Mur4 SINE Alu 42 148 -2 7 953 318 50 0 0 chr17 48276952 48276992 -46995659 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 953 422 245 46 92 chr17 48277000 48277153 -46995498 - B1_Mur2 SINE Alu -3 146 1 7 953 386 302 23 11 chr17 48277502 48277676 -46994975 + (TCCA)n Simple_repeat Simple_repeat 2 177 0 7 953 323 239 9 0 chr17 48278875 48278984 -46993667 + (TGGA)n Simple_repeat Simple_repeat 1 110 0 7 953 239 323 0 16 chr17 48279505 48279568 -46993083 + MER5A1 DNA MER1_type 76 137 -29 7 953 674 254 176 16 chr17 48280098 48280342 -46992309 - B4 SINE B4 -7 285 3 7 953 1766 205 16 62 chr17 48280384 48280784 -46991867 - ORR1B2 LTR MaLR 0 367 12 7 953 612 112 407 7 chr17 48280784 48280919 -46991732 - B2_Mm1t SINE B2 -2 191 3 7 953 277 279 59 103 chr17 48280919 48280948 -46991703 - ORR1B2 LTR MaLR -355 29 1 7 953 3357 35 5 0 chr17 48280953 48281347 -46991304 + MTA_Mm LTR MaLR 1 396 0 7 953 271 286 0 0 chr17 48281803 48281859 -46990792 + RSINE1 SINE B4 8 63 -102 7 953 430 285 29 29 chr17 48282044 48282214 -46990437 + CYRA11_Mm Unknown Y-chromosome 147 316 -301 7 953 819 143 220 11 chr17 48282074 48282251 -46990400 - URR1A DNA MER1_type -6 220 7 7 953 491 306 0 0 chr17 48283697 48283821 -46988830 + RSINE1 SINE B4 7 130 -35 7 953 555 237 41 41 chr17 48283919 48284064 -46988587 + ID_B1 SINE B4 80 224 0 7 953 264 284 203 37 chr17 48284173 48284444 -46988207 - LTR16A LTR ERVL -87 364 49 7 953 225 322 51 1 chr17 48285455 48285585 -46987066 - MIR SINE MIR -59 149 13 7 953 1453 213 59 12 chr17 48285613 48285936 -46986715 + ORR1D2 LTR MaLR 1 338 -32 7 953 7684 73 3 2 chr17 48286537 48287726 -46984925 + L1_Mus1 LINE L1 5376 6567 0 7 953 1022 252 57 12 chr17 48287909 48288154 -46984497 + MTD LTR MaLR 8 263 -156 7 953 1428 194 121 104 chr17 48288755 48289111 -46983540 - RMER16 LTR ERVK 0 533 169 7 953 3380 73 48 2 chr17 48289111 48289565 -46983086 + MT2C_Mm LTR ERVL 1 475 0 7 953 1428 216 80 111 chr17 48289565 48289656 -46982995 - RMER16 LTR ERVK -365 168 1 7 953 697 303 6 0 chr17 48291080 48291258 -46981393 - B3A SINE B2 -18 180 2 7 953 270 78 29 59 chr17 48291269 48291337 -46981314 + (TCTA)n Simple_repeat Simple_repeat 1 66 0 7 953 201 336 44 9 chr17 48291678 48291792 -46980859 + (TCCA)n Simple_repeat Simple_repeat 4 121 0 7 953 252 348 14 0 chr17 48292063 48292132 -46980519 + ID4 SINE ID 6 75 -8 7 953 386 69 17 0 chr17 48292139 48292197 -46980454 + (CAA)n Simple_repeat Simple_repeat 1 59 0 7 953 1122 15 0 0 chr17 48292290 48292422 -46980229 + (CAAAG)n Simple_repeat Simple_repeat 2 133 0 7 953 586 177 146 0 chr17 48292471 48292601 -46980050 + B1F2 SINE Alu 1 149 0 7 953 1774 209 54 101 chr17 48294173 48294710 -46977941 - RLTR18B LTR ERVK 0 512 1 7 953 337 333 39 10 chr17 48294742 48294845 -46977806 + PB1D7 SINE Alu 13 118 -2 7 953 2057 199 25 2 chr17 48295094 48295501 -46977150 + RLTR20D LTR ERVK 1 443 -91 7 953 414 0 0 0 chr17 48295501 48295547 -46977104 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 953 1055 261 101 72 chr17 48295547 48295639 -46977012 + RLTR20D LTR ERVK 444 534 0 7 953 249 33 0 0 chr17 48295684 48295714 -46976937 + (TAGA)n Simple_repeat Simple_repeat 1 30 0 7 953 543 276 28 17 chr17 48296665 48296842 -46975809 + B3A SINE B2 5 183 -15 7 953 2904 185 26 45 chr17 48297005 48297622 -46975029 + RLTR1D LTR ERV1 1 605 0 7 953 225 288 96 0 chr17 48297746 48297819 -46974832 - ID2 SINE ID -1 82 3 7 953 21 0 0 0 chr17 48297895 48297916 -46974735 + AT_rich Low_complexity Low_complexity 1 21 0 7 953 845 198 89 25 chr17 48297925 48298127 -46974524 - B3 SINE B2 0 216 2 7 953 675 160 0 19 chr17 48298254 48298362 -46974289 + B1_Mur4 SINE Alu 45 150 0 7 953 207 100 0 0 chr17 48298493 48298523 -46974128 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 953 403 189 50 170 chr17 48298533 48298692 -46973959 - B1_Mur3 SINE Alu -9 140 1 7 953 347 314 23 11 chr17 48299042 48299216 -46973435 + (TCCA)n Simple_repeat Simple_repeat 2 177 0 7 953 225 385 48 53 chr17 48299233 48299439 -46973212 + ORR1E LTR MaLR 155 359 0 7 953 311 239 9 0 chr17 48300411 48300520 -46972131 + (TGGA)n Simple_repeat Simple_repeat 1 110 0 7 953 256 386 0 11 chr17 48301051 48301140 -46971511 + MER5A1 DNA MER1_type 76 163 -3 7 953 521 287 87 18 chr17 48301639 48301849 -46970802 - B4A SINE B4 -7 285 46 7 953 2118 161 16 8 chr17 48301968 48302332 -46970319 - ORR1B2 LTR MaLR 0 367 1 7 953 288 268 0 0 chr17 48302769 48302825 -46969826 + RSINE1 SINE B4 8 63 -102 7 953 388 312 29 29 chr17 48303020 48303195 -46969456 + CYRA11_Mm Unknown Y-chromosome 142 316 -301 7 953 738 182 20 13 chr17 48303055 48303205 -46969446 - URR1A DNA MER1_type -6 220 70 7 953 264 288 142 18 chr17 48304670 48304783 -46967868 + RSINE1 SINE B4 4 130 -35 7 953 624 225 41 48 chr17 48304885 48304898 -46967753 + ID_B1 SINE B4 80 205 -19 7 953 284 230 140 73 chr17 48304898 48305005 -46967646 - YREP_Mm Unknown Unknown -1505 307 200 7 953 2272 79 13 19 chr17 48305005 48305316 -46967335 + RLTR27 LTR ERVK 1 309 0 8 953 624 225 41 48 chr17 48305316 48305340 -46967311 + ID_B1 SINE B4 206 223 -1 7 953 284 230 140 73 chr17 48305340 48305358 -46967293 - YREP_Mm Unknown Unknown -1613 199 148 7 953 297 313 162 22 chr17 48305465 48305743 -46966908 - LTR16A LTR ERVL -108 343 27 8 953 564 260 46 30 chr17 48306135 48306266 -46966385 + ETnERV2-int LTR ERVK 7070 7202 -204 8 953 204 302 65 19 chr17 48307268 48307376 -46965275 - MIRc SINE MIR -129 139 27 8 953 1425 216 59 12 chr17 48307416 48307739 -46964912 + ORR1D2 LTR MaLR 1 338 -32 8 953 239 231 0 0 chr17 48308041 48308093 -46964558 + (CA)n Simple_repeat Simple_repeat 1 52 0 8 953 356 169 0 0 chr17 48308204 48308263 -46964388 + B4 SINE B4 1 59 -233 8 953 319 192 53 27 chr17 48309189 48309264 -46963387 + RMER17C-int LTR ERVK 379 455 -2783 8 953 938 280 36 56 chr17 48309308 48309664 -46962987 + RodERV21-int LTR ERV1 730 1078 -3913 8 953 4473 261 34 29 chr17 48309782 48310965 -46961686 + RodERV21-int LTR ERV1 1112 2300 -2691 8 953 3689 42 5 2 chr17 48310965 48311400 -46961251 - RLTR10C LTR ERVK 0 436 1 8 953 44456 34 7 1 chr17 48311400 48316470 -46956181 - MMERVK10C-int LTR ERVK 0 7581 1885 8 953 327 155 17 0 chr17 48316477 48316535 -46956116 - MMERVK10C-int LTR ERVK -5627 1779 1721 8 953 779 198 231 45 chr17 48316519 48316905 -46955746 - MMERVK10C-int LTR ERVK -4795 611 312 8 953 888 157 4 158 chr17 48316995 48317260 -46955391 - MMERVK10C-int LTR ERVK -6629 952 729 8 953 2820 58 3 0 chr17 48317258 48317600 -46955051 - MMERVK10C-int LTR ERVK -7238 343 1 8 953 3689 42 5 2 chr17 48317600 48318035 -46954616 - RLTR10C LTR ERVK 0 436 1 8 953 1595 263 16 46 chr17 48318038 48318472 -46954179 + RodERV21-int LTR ERV1 2298 2718 -2273 8 953 446 332 70 45 chr17 48318592 48319075 -46953576 + RodERV21-int LTR ERV1 3586 4080 -3011 8 953 257 378 18 22 chr17 48319304 48319531 -46953120 + MuLV-int LTR ERV1 3470 3695 -3906 8 953 306 186 23 52 chr17 48319905 48320008 -46952643 + MuLV-int LTR ERV1 4830 4949 -2657 8 953 3504 332 35 31 chr17 48320660 48322312 -46950339 + RodERV21-int LTR ERV1 3132 4789 -202 8 953 233 323 105 23 chr17 48322372 48322505 -46950146 + RMER4B LTR ERVK 347 490 -95 8 953 308 119 17 0 chr17 48322687 48322746 -46949905 + (TC)n Simple_repeat Simple_repeat 1 60 0 8 953 581 154 7 102 chr17 48322834 48322971 -46949680 + MYSERV-int LTR ERVK 6425 6548 -2 8 953 822 171 30 25 chr17 48322972 48323155 -46949496 + RLTR11B LTR ERVK 1 193 -334 8 953 3101 162 49 0 chr17 48323160 48323667 -46948984 - Lx5 LINE L1 -230 6820 6289 8 953 1614 149 13 23 chr17 48323668 48323970 -46948681 + RLTR11B LTR ERVK 137 435 -18 8 953 357 190 30 0 chr17 48323970 48324070 -46948581 + (ATG)n Simple_repeat Simple_repeat 1 103 0 8 953 354 284 0 0 chr17 48324081 48324162 -46948489 + ID4_ SINE ID 3 83 0 8 953 30 77 0 0 chr17 48324882 48324947 -46947704 + AT_rich Low_complexity Low_complexity 1 65 0 8 953 243 0 0 0 chr17 48325102 48325129 -46947522 + (CCAA)n Simple_repeat Simple_repeat 2 28 0 8 953 321 89 0 0 chr17 48325129 48325174 -46947477 + (CAA)n Simple_repeat Simple_repeat 1 45 0 8 953 351 314 24 16 chr17 48325209 48325335 -46947316 - Lx7 LINE L1 -377 7319 7193 8 953 593 278 66 15 chr17 48325416 48325613 -46947038 - Lx6 LINE L1 -172 7288 7082 8 953 521 161 0 203 chr17 48325621 48325808 -46946843 + RLTR41 LTR ERV1 29 177 -269 8 953 1081 282 33 47 chr17 48326502 48326952 -46945699 + MuRRS4-int LTR ERV1 1238 1681 -3382 8 953 331 321 57 81 chr17 48326946 48327129 -46945522 + MuRRS4-int LTR ERV1 2425 2603 -4998 8 953 3237 43 8 5 chr17 48327129 48327524 -46945127 + MTA_Mm LTR MaLR 1 396 0 8 953 9423 28 2 3 chr17 48327524 48328623 -46944028 + MTA_Mm-int LTR MaLR 1 1098 0 8 953 3206 37 39 0 chr17 48328623 48329004 -46943647 + MTA_Mm LTR MaLR 1 396 0 8 953 367 310 28 36 chr17 48329004 48329198 -46943453 + MuRRS4-int LTR ERV1 1409 1541 -3776 8 953 4346 46 0 23 chr17 48339679 48340210 -46932441 + MURVY-LTR LTR ERV1 1 519 0 8 953 4656 272 62 81 chr17 48340210 48340950 -46931701 + MMERGLN-int LTR ERV1 3 786 -6770 8 953 189 167 0 127 chr17 48340950 48341005 -46931646 + MIRb SINE MIR 36 83 -185 8 953 4656 272 62 81 chr17 48341005 48342916 -46929735 + MMERGLN-int LTR ERV1 787 2813 -4743 8 953 4579 273 14 19 chr17 48342916 48344449 -46928202 + MMERGLN-int LTR ERV1 2152 4977 -2579 8 953 3504 47 28 5 chr17 48344449 48344875 -46927776 - RLTR10C LTR ERVK 0 436 1 8 953 7446 44 2 70 chr17 48344881 48345874 -46926777 - MMERVK10C-int LTR ERVK 0 7581 6651 8 953 19119 43 8 0 chr17 48345865 48348147 -46924504 - MMERVK10C-int LTR ERVK -1771 5810 3512 8 953 1997 13 9 4 chr17 48348116 48348349 -46924302 - RLTR10-int LTR ERVK -1102 885 652 8 953 349 89 0 0 chr17 48348352 48348397 -46924254 - RLTR10-int LTR ERVK -6405 137 93 8 953 262 116 78 44 chr17 48348397 48348487 -46924164 + CT-rich Low_complexity Low_complexity 2 94 0 8 953 376 47 0 0 chr17 48348569 48348612 -46924039 - MMERVK10C-int LTR ERVK -7314 267 225 8 953 254 222 0 0 chr17 48348612 48348657 -46923994 - RLTR27 LTR ERVK -34 275 231 8 953 1496 56 0 0 chr17 48348657 48348837 -46923814 - MMERVK10C-int LTR ERVK -7401 180 1 8 953 3407 45 30 23 chr17 48348837 48349270 -46923381 - RLTR10C LTR ERVK 0 436 1 8 953 3010 313 71 75 chr17 48349270 48351838 -46920813 + MMERGLN-int LTR ERV1 5136 7692 -86 8 953 310 75 0 0 chr17 48352904 48352944 -46919707 + MMERGLN-int LTR ERV1 7737 7776 -2 8 953 3690 82 61 4 chr17 48352946 48353437 -46919214 + MURVY-LTR LTR ERV1 1 519 0 8 953 1301 115 16 66 chr17 48355260 48355502 -46917149 + RLTR13A LTR ERVK 1 230 -625 8 119 33754 79 17 6 chr17 48361348 48367488 -46905163 + L1Md_F2 LINE L1 240 6553 -32 8 954 233 263 118 0 chr17 48368637 48368713 -46903938 - ID_B1 SINE B4 -34 190 106 8 954 452 287 23 8 chr17 48368736 48368866 -46903785 - B1_Mur2 SINE Alu -17 132 1 8 954 458 301 0 0 chr17 48368899 48369002 -46903649 + RSINE1 SINE B4 14 116 -49 8 954 480 248 76 15 chr17 48369005 48369136 -46903515 - B3 SINE B2 -69 147 9 8 954 313 321 26 68 chr17 48369381 48369498 -46903153 - ID_B1 SINE B4 -90 134 23 8 954 331 271 0 0 chr17 48369433 48369503 -46903148 - BC1_Mm scRNA scRNA -66 86 17 8 954 464 178 0 9 chr17 48369526 48369634 -46903017 + (CAT)n Simple_repeat Simple_repeat 1 107 0 8 954 381 149 0 0 chr17 48369648 48369715 -46902936 + (ATGGTG)n Simple_repeat Simple_repeat 4 70 0 8 954 593 342 57 26 chr17 48369888 48370152 -46902499 - MER54A LTR ERVL -603 298 27 8 954 680 208 0 8 chr17 48370331 48370462 -46902189 + B1_Mur2 SINE Alu 19 148 -1 8 954 417 270 131 10 chr17 48370518 48370709 -46901942 + RLTR12B LTR ERVK 1 233 -295 8 954 288 267 12 42 chr17 48370761 48370929 -46901722 + (TG)n Simple_repeat Simple_repeat 1 163 0 8 954 458 269 71 125 chr17 48370982 48370993 -46901658 + RLTR12B LTR ERVK 212 219 -308 8 954 3344 38 8 0 chr17 48370993 48371386 -46901265 - MTA_Mm LTR MaLR 0 396 1 8 954 626 269 71 125 chr17 48371386 48371671 -46900980 + RLTR12B LTR ERVK 220 493 -35 8 954 396 0 0 0 chr17 48372063 48372107 -46900544 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 954 947 109 22 0 chr17 48372125 48372262 -46900389 - B1_Mur4 SINE Alu -10 140 1 8 954 186 71 0 0 chr17 48372269 48372297 -46900354 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 8 954 484 208 22 58 chr17 48372299 48372437 -46900214 - B1_Mur1 SINE Alu 0 149 17 8 954 584 336 90 0 chr17 48372443 48372654 -46899997 - B4A SINE B4 -62 230 1 8 954 1112 176 18 26 chr17 48372668 48372895 -46899756 + URR1B DNA MER1_type 1 225 0 8 954 32 0 0 0 chr17 48373016 48373048 -46899603 + AT_rich Low_complexity Low_complexity 1 32 0 8 954 952 268 14 5 chr17 48373069 48373279 -46899372 - B3 SINE B2 -3 213 2 8 954 251 246 0 0 chr17 48373265 48373322 -46899329 - ID4 SINE ID 0 83 27 8 954 225 373 24 100 chr17 48373315 48373385 -46899266 - B4 SINE B4 -45 247 91 8 954 469 270 40 0 chr17 48373385 48373485 -46899166 - PB1D7 SINE Alu -11 109 6 8 954 695 190 20 27 chr17 48373504 48373650 -46899001 - B1_Mur2 SINE Alu -3 146 2 8 954 641 237 0 49 chr17 48374094 48374236 -46898415 - ID_B1 SINE B4 0 224 90 8 954 379 177 10 10 chr17 48374471 48374568 -46898083 + (TG)n Simple_repeat Simple_repeat 2 98 0 8 954 597 236 0 0 chr17 48374613 48374787 -46897864 + (TG)n Simple_repeat Simple_repeat 1 174 0 8 954 324 340 162 20 chr17 48375262 48375460 -46897191 - MLT1K LTR MaLR -350 245 20 8 954 806 285 43 96 chr17 48375697 48376000 -46896651 + B4 SINE B4 2 288 -4 8 954 305 288 48 129 chr17 48376560 48376871 -46895780 + RLTR12B LTR ERVK 4 289 -239 8 954 33 25 0 0 chr17 48378637 48378677 -46893974 + AT_rich Low_complexity Low_complexity 1 40 0 8 954 801 209 0 13 chr17 48378758 48378908 -46893743 + B1_Mur2 SINE Alu 1 148 -1 8 954 241 328 0 15 chr17 48379924 48379989 -46892662 - MER5A1 DNA MER1_type -27 139 76 8 954 286 241 19 0 chr17 48380521 48380629 -46892022 + (TCCA)n Simple_repeat Simple_repeat 1 110 0 8 954 548 14 14 0 chr17 48381573 48381642 -46891009 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 8 954 264 30 0 0 chr17 48381683 48381716 -46890935 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 954 2800 157 9 4 chr17 48381717 48382177 -46890474 - RLTR20D LTR ERVK -106 462 1 8 954 228 264 0 22 chr17 48382186 48382275 -46890376 + (TCTA)n Simple_repeat Simple_repeat 1 87 0 8 954 1805 216 52 103 chr17 48382561 48383097 -46889554 + RLTR18B LTR ERVK 1 509 -3 8 954 184 245 73 36 chr17 48383361 48383416 -46889235 - MIRc SINE MIR -118 150 94 8 954 578 298 63 16 chr17 48385293 48385484 -46887167 + B4 SINE B4 18 217 -75 8 954 194 62 31 0 chr17 48385485 48385517 -46887134 + (CAA)n Simple_repeat Simple_repeat 3 35 0 8 954 762 255 52 84 chr17 48385557 48385863 -46886788 + MTE2a LTR MaLR 15 331 -88 8 954 351 0 0 0 chr17 48385863 48385902 -46886749 + (TTG)n Simple_repeat Simple_repeat 3 41 0 8 954 301 366 10 29 chr17 48385927 48386031 -46886620 + ID_B1 SINE B4 65 166 -58 8 954 427 317 0 37 chr17 48385958 48386066 -46886585 + PB1D10 SINE Alu 13 116 -1 8 954 275 250 67 67 chr17 48386164 48386284 -46886367 - MER5A DNA MER1_type -27 162 43 8 954 270 321 68 62 chr17 48386165 48386311 -46886340 + MER5B DNA MER1_type 29 175 -3 8 954 787 232 171 18 chr17 48386341 48386569 -46886082 + B4 SINE B4 3 265 -27 8 954 533 234 39 0 chr17 48387759 48387887 -46884764 + B1F SINE Alu 1 133 -16 8 954 402 74 0 0 chr17 48387891 48387945 -46884706 + (GGGA)n Simple_repeat Simple_repeat 3 56 0 8 954 589 179 0 12 chr17 48387993 48388157 -46884494 + GA-rich Low_complexity Low_complexity 2 163 0 8 954 759 100 0 0 chr17 48388161 48388271 -46884380 + (GAAA)n Simple_repeat Simple_repeat 1 110 0 8 954 330 26 0 0 chr17 48388318 48388357 -46884294 + (GA)n Simple_repeat Simple_repeat 1 39 0 8 954 214 264 110 44 chr17 48389207 48389244 -46883407 + MIR3 SINE MIR 84 130 -78 8 954 273 29 0 0 chr17 48389244 48389278 -46883373 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 8 954 214 264 110 44 chr17 48389278 48389331 -46883320 + MIR3 SINE MIR 131 179 -29 8 954 599 207 25 0 chr17 48389600 48389721 -46882930 - Lx6 LINE L1 -170 7290 7167 8 954 4326 222 72 7 chr17 48390267 48390526 -46882125 - Lx6 LINE L1 -288 7172 6911 8 954 549 0 0 0 chr17 48390526 48390587 -46882064 + (TC)n Simple_repeat Simple_repeat 1 61 0 8 954 4326 222 72 7 chr17 48390587 48391217 -46881434 - Lx6 LINE L1 -550 6910 6226 8 954 207 0 0 0 chr17 48391231 48391254 -46881397 + (TATG)n Simple_repeat Simple_repeat 1 23 0 8 954 308 206 493 0 chr17 48391254 48391390 -46881261 - B3 SINE B2 -13 203 1 8 954 373 247 12 0 chr17 48391682 48391763 -46880888 + ID4_ SINE ID 2 83 0 8 954 200 143 18 0 chr17 48391764 48391820 -46880831 + A-rich Low_complexity Low_complexity 2 58 0 8 954 513 47 43 70 chr17 48391808 48391923 -46880728 + GA-rich Low_complexity Low_complexity 4 115 0 8 954 216 339 31 0 chr17 48391923 48391988 -46880663 + polypurine Low_complexity Low_complexity 4 70 0 8 954 303 284 153 22 chr17 48391991 48392128 -46880523 + HAL1-3A_ME LINE L1 2285 2439 -419 9 954 220 210 13 83 chr17 48392130 48392286 -46880365 + G-rich Low_complexity Low_complexity 2 146 0 9 954 1032 81 12 12 chr17 48392313 48392475 -46880176 + (GGAAA)n Simple_repeat Simple_repeat 2 163 0 9 954 769 242 18 12 chr17 48392527 48392726 -46879925 + B4 SINE B4 48 248 -44 9 954 434 227 73 0 chr17 48392740 48392850 -46879801 + B1_Mur1 SINE Alu 6 123 -26 9 954 229 280 73 91 chr17 48393058 48393168 -46879483 + MIR3 SINE MIR 10 117 -91 9 954 251 262 0 16 chr17 48393726 48393788 -46878863 + C-rich Low_complexity Low_complexity 5 65 0 9 954 907 9 18 0 chr17 48393825 48393937 -46878714 + (GA)n Simple_repeat Simple_repeat 2 115 0 9 954 1521 198 79 110 chr17 48393937 48394397 -46878254 - RLTR11A LTR ERVK -82 446 1 9 954 230 197 33 0 chr17 48394400 48394461 -46878190 + CT-rich Low_complexity Low_complexity 4 66 0 9 954 776 226 178 9 chr17 48394527 48394853 -46877798 + MTD LTR MaLR 1 381 -38 9 954 1161 140 5 5 chr17 48394853 48395040 -46877611 - MTC LTR MaLR 0 421 235 9 954 5249 177 108 47 chr17 48395040 48396225 -46876426 - MTC-int LTR MaLR 0 1258 2 9 954 1069 218 22 52 chr17 48396225 48396308 -46876343 - MTC LTR MaLR -188 219 145 9 954 198 0 0 0 chr17 48396655 48396677 -46875974 + (A)n Simple_repeat Simple_repeat 1 22 0 9 954 623 180 36 0 chr17 48397619 48397730 -46874921 - PB1D9 SINE Alu 0 120 6 9 954 22 35 0 0 chr17 48398179 48398208 -46874443 + AT_rich Low_complexity Low_complexity 1 29 0 9 954 446 255 11 0 chr17 48398238 48398332 -46874319 + MTE2b LTR MaLR 1 95 -284 9 954 1950 204 24 8 chr17 48398383 48398763 -46873888 + ORR1C1-int LTR MaLR 6 391 -1118 9 954 1341 244 54 85 chr17 48398743 48399484 -46873167 + RMER13B LTR ERVK 19 908 0 9 954 367 256 8 17 chr17 48399484 48399603 -46873048 + ORR1C1-int LTR MaLR 412 529 -980 9 954 649 222 20 34 chr17 48399604 48399753 -46872898 + B1_Mur3 SINE Alu 3 149 0 9 954 2496 216 185 50 chr17 48399754 48400510 -46872141 + ORR1C1-int LTR MaLR 513 1370 0 9 954 1065 151 10 36 chr17 48400511 48400703 -46871948 + ORR1C1 LTR MaLR 2 188 -190 9 954 291 182 0 0 chr17 48400703 48400780 -46871871 + CT-rich Low_complexity Low_complexity 2 78 0 9 954 970 216 67 0 chr17 48400783 48400977 -46871674 + ORR1C1 LTR MaLR 174 380 -4 9 954 436 254 76 83 chr17 48401107 48401337 -46871314 + RMER20A LTR ERVK 215 422 -205 9 954 533 232 18 9 chr17 48401480 48401593 -46871058 - B3 SINE B2 -8 208 95 9 954 1037 307 34 34 chr17 48401554 48401881 -46870770 + MTE2b LTR MaLR 51 377 -2 9 954 374 324 34 23 chr17 48401910 48402087 -46870564 - L1MC1 LINE L1 -80 6253 6075 9 954 706 249 5 73 chr17 48402149 48402340 -46870311 - B3A SINE B2 -1 197 20 9 954 343 195 0 94 chr17 48402441 48402526 -46870125 + ID4 SINE ID 3 79 -4 9 954 403 100 0 32 chr17 48402844 48402906 -46869745 + RMER17B LTR ERVK 1 60 -898 9 954 831 119 34 0 chr17 48404582 48404700 -46867951 + B1_Mur1 SINE Alu 23 144 -5 9 954 604 273 41 41 chr17 48404709 48404904 -46867747 - B3A SINE B2 -2 196 2 9 954 10891 120 36 55 chr17 48404978 48405486 -46867165 - RLTR22_Mur LTR ERVK 0 1848 1349 9 954 324 0 0 0 chr17 48405486 48405522 -46867129 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 954 10891 120 36 55 chr17 48405522 48406897 -46865754 - RLTR22_Mur LTR ERVK -500 1348 3 9 954 441 301 88 35 chr17 48407253 48407476 -46865175 + L1M1 LINE L1 5333 5559 -597 9 954 273 302 56 69 chr17 48407478 48407638 -46865013 - YREP_Mm Unknown Unknown -1473 339 182 9 954 538 258 25 0 chr17 48407523 48407643 -46865008 + ID_B1 SINE B4 102 224 0 9 954 667 171 19 0 chr17 48407652 48407757 -46864894 + PB1D9 SINE Alu 7 113 -7 9 954 295 310 98 17 chr17 48407775 48407949 -46864702 + L1MA6 LINE L1 5937 6124 -176 9 954 976 188 12 18 chr17 48407971 48408139 -46864512 - B3 SINE B2 0 216 50 9 954 414 0 0 0 chr17 48408220 48408266 -46864385 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 9 954 220 119 191 0 chr17 48408274 48408316 -46864335 - B3A SINE B2 -148 50 1 9 954 237 293 121 0 chr17 48408320 48408436 -46864215 + L1MA6 LINE L1 6117 6246 -54 9 954 201 182 0 0 chr17 48408478 48408533 -46864118 + (TTA)n Simple_repeat Simple_repeat 3 57 0 9 954 344 314 147 0 chr17 48408533 48408635 -46864016 - RSINE1 SINE B4 -4 161 45 9 954 637 293 60 47 chr17 48409443 48409676 -46862975 + B4A SINE B4 1 236 -56 9 954 333 62 0 0 chr17 48409694 48409742 -46862909 + (TC)n Simple_repeat Simple_repeat 1 48 0 9 954 226 143 24 0 chr17 48409742 48409784 -46862867 + (CA)n Simple_repeat Simple_repeat 2 44 0 9 954 370 270 54 0 chr17 48410135 48410246 -46862405 + B1_Mur3 SINE Alu 30 146 -3 9 954 598 224 137 20 chr17 48410411 48410557 -46862094 + B3 SINE B2 54 216 0 9 954 330 333 33 40 chr17 48410598 48410615 -46862036 + B1F1 SINE Alu 1 149 0 9 954 436 294 15 53 chr17 48410615 48410748 -46861903 + ID_B1 SINE B4 97 224 0 9 954 819 84 34 0 chr17 48410760 48410879 -46861772 + B1_Mus1 SINE Alu 1 123 -25 9 954 968 120 42 14 chr17 48411113 48411257 -46861394 + B1_Mur2 SINE Alu 2 149 0 9 954 22 0 0 0 chr17 48411294 48411316 -46861335 + AT_rich Low_complexity Low_complexity 1 22 0 9 954 1910 142 133 3 chr17 48412652 48412998 -46859653 + ORR1B1 LTR MaLR 3 393 -1 9 954 750 149 0 16 chr17 48413088 48413211 -46859440 - RMER19C LTR ERVK 0 611 491 9 954 21 0 0 0 chr17 48413593 48413614 -46859037 + AT_rich Low_complexity Low_complexity 1 21 0 9 954 1785 156 208 11 chr17 48414790 48415007 -46857644 + RLTR20B3 LTR ERVK 1 257 -354 9 954 357 62 0 0 chr17 48415007 48415055 -46857596 + (GGCTG)n Simple_repeat Simple_repeat 1 48 0 9 954 2986 153 92 22 chr17 48415055 48415683 -46856968 + RLTR20B3 LTR ERVK 1 525 -52 9 954 543 90 0 0 chr17 48415683 48415761 -46856890 + (CTG)n Simple_repeat Simple_repeat 3 80 0 9 954 2986 152 65 25 chr17 48415761 48415805 -46856846 + RLTR20B3 LTR ERVK 526 574 -3 9 954 1073 187 10 15 chr17 48415805 48415993 -46856658 + RMER19C LTR ERVK 425 611 0 9 954 667 236 79 43 chr17 48416131 48416295 -46856356 - B3A SINE B2 -2 196 27 9 954 790 286 123 89 chr17 48416732 48417324 -46855327 + RLTR18 LTR ERVK 1 612 -4 9 954 284 200 0 18 chr17 48417330 48417386 -46855265 + Lx8 LINE L1 6737 6791 -682 9 954 2088 75 11 22 chr17 48417388 48417735 -46854916 - RLTR10A LTR ERVK -27 332 1 9 954 303 196 36 0 chr17 48417735 48417791 -46854860 + Lx8 LINE L1 6927 6984 -489 9 954 1795 184 12 3 chr17 48417792 48418119 -46854532 - RMER6A LTR ERVK 0 756 427 9 954 203 0 0 36 chr17 48418151 48418179 -46854472 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 9 954 1623 141 119 38 chr17 48418187 48418505 -46854146 - RMER2 LTR ERV1 -223 344 1 9 954 305 223 39 87 chr17 48418505 48418601 -46854050 - RMER6A LTR ERVK -335 421 331 9 954 14322 116 24 17 chr17 48418601 48420553 -46852098 + MERVK26-int LTR ERVK 4256 6231 -688 9 954 243 0 0 0 chr17 48420553 48420580 -46852071 + (CA)n Simple_repeat Simple_repeat 1 27 0 9 954 14322 116 24 17 chr17 48420580 48420770 -46851881 + MERVK26-int LTR ERVK 6232 6413 -506 9 954 306 0 0 0 chr17 48421052 48421086 -46851565 + (CA)n Simple_repeat Simple_repeat 1 34 0 9 954 483 63 0 0 chr17 48421086 48421149 -46851502 + (GA)n Simple_repeat Simple_repeat 2 64 0 9 954 381 244 12 0 chr17 48421567 48421649 -46851002 + RMER17A-int LTR ERVK 1002 1084 -644 9 954 1176 273 75 83 chr17 48421782 48422418 -46850233 + RMER17A-int LTR ERVK 1098 1728 0 9 954 993 292 76 84 chr17 48422418 48422819 -46849832 + RMER13A LTR ERVK 1 401 -459 9 954 1127 83 0 0 chr17 48422819 48422963 -46849688 + B1_Mus2 SINE Alu 2 145 -2 9 954 228 35 0 0 chr17 48422963 48422992 -46849659 + (CAA)n Simple_repeat Simple_repeat 2 30 0 9 954 1305 96 22 6 chr17 48422993 48423171 -46849480 - B2_Mm2 SINE B2 -14 181 1 9 954 993 340 192 62 chr17 48423171 48423578 -46849073 + RMER13A LTR ERVK 402 860 0 9 954 868 261 39 10 chr17 48423578 48423780 -46848871 - B4A SINE B4 -83 209 2 9 954 339 324 103 72 chr17 48423928 48424248 -46848403 - L1MEg LINE L1 -981 1526 1118 9 954 656 228 178 0 chr17 48424248 48424428 -46848223 - B3 SINE B2 -3 213 2 9 954 339 320 103 73 chr17 48424428 48424606 -46848045 - L1MEg LINE L1 -5125 1117 928 9 954 304 310 0 53 chr17 48424610 48424685 -46847966 + RSINE1 SINE B4 4 74 -91 9 954 387 0 0 0 chr17 48424708 48424751 -46847900 + (GA)n Simple_repeat Simple_repeat 2 44 0 9 954 23 0 0 0 chr17 48424776 48424799 -46847852 + AT_rich Low_complexity Low_complexity 1 23 0 9 954 1804 249 81 23 chr17 48424799 48425150 -46847501 + Lx6 LINE L1 6351 6722 -738 9 954 3411 33 0 8 chr17 48425150 48425549 -46847102 - MTA_Mm LTR MaLR 0 396 1 9 954 2344 226 137 12 chr17 48425549 48426205 -46846446 + Lx6 LINE L1 6723 7460 0 9 954 1869 261 50 36 chr17 48426248 48426768 -46845883 + Lx5 LINE L1 6506 7032 -18 9 954 540 225 36 0 chr17 48426811 48426922 -46845729 + B3 SINE B2 102 216 0 9 954 1410 250 109 133 chr17 48427029 48427451 -46845200 - RLTR25B LTR ERVK 0 1028 595 9 954 1822 137 54 90 chr17 48427451 48427667 -46844984 + RMER17C LTR ERVK 2 205 -205 9 954 432 0 0 0 chr17 48427667 48427715 -46844936 + (TC)n Simple_repeat Simple_repeat 1 48 0 9 954 1822 137 54 90 chr17 48427715 48427922 -46844729 + RMER17C LTR ERVK 206 410 0 9 954 1410 250 109 133 chr17 48427922 48428518 -46844133 - RLTR25B LTR ERVK -434 594 36 9 954 523 197 50 33 chr17 48428519 48428640 -46844011 - B1_Mur2 SINE Alu -26 123 1 9 954 239 242 69 145 chr17 48428640 48428673 -46843978 - MT2B LTR ERVL -449 152 131 9 954 322 298 83 8 chr17 48429134 48429266 -46843385 + ID_B1 SINE B4 80 221 -3 9 954 210 316 0 26 chr17 48429330 48429408 -46843243 + G-rich Low_complexity Low_complexity 6 81 0 9 954 458 152 31 31 chr17 48429418 48429581 -46843070 + GA-rich Low_complexity Low_complexity 1 163 0 9 954 641 164 8 8 chr17 48429611 48429728 -46842923 - RLTR11A LTR ERVK 0 528 412 9 954 560 135 42 0 chr17 48429733 48429829 -46842822 - RMER19B LTR ERVK -802 100 1 9 954 242 260 28 103 chr17 48429829 48429931 -46842720 - RLTR11A LTR ERVK -430 98 5 9 954 2122 152 42 69 chr17 48429978 48430382 -46842269 + ORR1B1 LTR MaLR 1 393 -1 9 954 2269 164 8 23 chr17 48430382 48430770 -46841881 - MTD LTR MaLR -37 382 1 9 954 633 202 89 0 chr17 48431214 48431338 -46841313 + B1_Mur2 SINE Alu 2 136 -13 9 954 276 363 88 5 chr17 48431417 48431611 -46841040 - L1M2c LINE L1 -6361 428 219 9 954 359 162 122 0 chr17 48431650 48431724 -46840927 + MYSERV16_I-int LTR ERVK 491 573 -1753 9 954 1101 167 52 61 chr17 48431745 48431974 -46840677 + MYSERV16_I-int LTR ERVK 652 878 -1448 9 954 270 307 76 35 chr17 48431974 48432119 -46840532 + RMER4A LTR ERVK 258 408 -58 9 954 1969 197 55 26 chr17 48432186 48432617 -46840034 + RLTR20B3 LTR ERVK 1 471 -106 9 954 1125 63 0 0 chr17 48432617 48432776 -46839875 + (TG)n Simple_repeat Simple_repeat 2 160 0 1 954 1969 190 45 24 chr17 48432776 48432828 -46839823 + RLTR20B3 LTR ERVK 472 533 -44 9 954 338 332 65 11 chr17 48432882 48433068 -46839583 - L1M2c LINE L1 -6361 428 233 1 954 937 171 79 45 chr17 48433123 48433325 -46839326 - B3 SINE B2 -3 213 5 1 954 225 151 0 0 chr17 48433412 48433465 -46839186 + (TCTG)n Simple_repeat Simple_repeat 2 54 0 1 954 700 313 43 18 chr17 48433522 48433802 -46838849 - B4A SINE B4 -5 287 1 1 954 212 100 25 0 chr17 48433828 48433868 -46838783 + (TTTTTG)n Simple_repeat Simple_repeat 3 43 0 1 954 825 228 62 24 chr17 48433952 48434163 -46838488 - ID_B1 SINE B4 -5 219 1 1 954 311 229 16 0 chr17 48434171 48434232 -46838419 + L1MB8 LINE L1 6115 6176 -2 1 954 249 33 0 0 chr17 48434307 48434337 -46838314 + (CCA)n Simple_repeat Simple_repeat 3 32 0 1 954 297 0 0 0 chr17 48434337 48434370 -46838281 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1 954 1717 99 210 0 chr17 48434634 48434906 -46837745 - ORR1A4 LTR MaLR 0 329 1 1 954 457 252 103 95 chr17 48434914 48435177 -46837474 - RLTR12B LTR ERVK -31 497 233 1 954 2555 50 3 0 chr17 48435187 48435505 -46837146 + ORR1A2 LTR MaLR 1 319 -8 1 954 437 279 141 9 chr17 48435519 48435702 -46836949 - RLTR12B LTR ERVK -300 228 6 1 954 473 294 0 16 chr17 48435720 48435841 -46836810 + B3A SINE B2 1 119 -79 1 954 883 251 5 27 chr17 48436505 48436726 -46835925 - B3 SINE B2 0 216 1 1 954 216 0 0 0 chr17 48436797 48436821 -46835830 + (T)n Simple_repeat Simple_repeat 1 24 0 1 954 777 178 84 19 chr17 48436855 48437010 -46835641 + B3 SINE B2 48 212 -4 1 954 224 98 0 56 chr17 48437013 48437067 -46835584 + A-rich Low_complexity Low_complexity 1 51 0 1 954 318 169 0 44 chr17 48437089 48437157 -46835494 - PB1D10 SINE Alu -1 116 52 1 954 276 257 71 0 chr17 48437179 48437249 -46835402 + ID_B1 SINE B4 145 219 -5 1 954 485 253 11 107 chr17 48437423 48437483 -46835168 - RSINE1 SINE B4 0 165 115 1 954 258 106 0 0 chr17 48437483 48437530 -46835121 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 1 954 485 253 11 107 chr17 48437530 48437570 -46835081 - RSINE1 SINE B4 -51 114 78 1 954 2030 156 30 25 chr17 48437570 48437965 -46834686 - RMER10B LTR ERVL 0 398 2 1 954 485 253 11 107 chr17 48437965 48438040 -46834611 - RSINE1 SINE B4 -88 77 6 1 954 295 250 106 12 chr17 48438063 48438148 -46834503 - MTE2b LTR MaLR -81 298 206 1 954 230 167 13 165 chr17 48438162 48438241 -46834410 - RMER5 LTR ERV1 -467 67 1 1 954 399 41 0 0 chr17 48438369 48438418 -46834233 + (TGAA)n Simple_repeat Simple_repeat 3 51 0 1 954 518 117 83 0 chr17 48438958 48439103 -46833548 + GA-rich Low_complexity Low_complexity 1 157 0 1 954 333 0 0 0 chr17 48439113 48439150 -46833501 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 954 360 0 0 0 chr17 48439150 48439189 -46833462 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 954 195 42 0 0 chr17 48439875 48439899 -46832752 + (CTG)n Simple_repeat Simple_repeat 1 24 0 1 954 429 66 0 0 chr17 48440797 48440858 -46831793 + (TC)n Simple_repeat Simple_repeat 2 62 0 1 954 448 241 112 0 chr17 48440955 48441071 -46831580 - B1F SINE Alu -9 140 12 1 954 225 224 33 33 chr17 48441323 48441383 -46831268 + ZP3AR Satellite Satellite 22 81 -131 1 954 260 234 12 47 chr17 48441344 48441429 -46831222 + ID4 SINE ID 1 82 -1 1 954 222 281 15 59 chr17 48442483 48442551 -46830100 - L2a LINE L2 -38 3388 3324 1 954 865 166 7 40 chr17 48442881 48443032 -46829619 - B1_Mur2 SINE Alu -2 147 2 1 954 428 260 35 151 chr17 48443032 48443061 -46829590 - B4 SINE B4 -217 75 67 1 954 183 80 0 0 chr17 48443127 48443152 -46829499 + (A)n Simple_repeat Simple_repeat 1 25 0 1 954 261 146 0 0 chr17 48443219 48443267 -46829384 + (TCTG)n Simple_repeat Simple_repeat 3 50 0 1 954 573 215 353 32 chr17 48443287 48443508 -46829143 - B4 SINE B4 0 292 1 1 954 672 93 0 0 chr17 48443625 48443722 -46828929 + (TG)n Simple_repeat Simple_repeat 2 98 0 1 954 232 348 0 0 chr17 48444460 48444552 -46828099 + (TG)n Simple_repeat Simple_repeat 1 92 0 1 954 6521 51 20 14 chr17 48444586 48445446 -46827205 - L1Md_F2 LINE L1 -2 6580 5716 1 954 862 224 136 10 chr17 48445467 48445665 -46826986 - B4 SINE B4 -68 224 2 1 954 358 206 0 0 chr17 48445754 48445822 -46826829 + RSINE1 SINE B4 8 75 -90 1 954 509 224 0 30 chr17 48446730 48446831 -46825820 + RSINE1 SINE B4 68 165 0 1 954 21 36 0 0 chr17 48446865 48446893 -46825758 + AT_rich Low_complexity Low_complexity 1 28 0 1 954 260 157 29 0 chr17 48448228 48448298 -46824353 + (CAGA)n Simple_repeat Simple_repeat 1 72 0 1 954 969 127 0 0 chr17 48449619 48449776 -46822875 + (GGA)n Simple_repeat Simple_repeat 1 157 0 1 954 380 272 143 0 chr17 48450347 48450494 -46822157 + MIRc SINE MIR 72 239 -29 1 954 600 228 88 26 chr17 48450594 48450788 -46821863 + B3 SINE B2 1 206 -10 1 954 379 251 23 57 chr17 48450800 48450977 -46821674 + (CATATA)n Simple_repeat Simple_repeat 2 172 0 1 954 1426 255 86 11 chr17 48451012 48451361 -46821290 - MTD LTR MaLR -31 388 14 1 954 1412 225 56 9 chr17 48451956 48452279 -46820372 - ORR1D2 LTR MaLR -32 338 1 1 954 210 333 62 9 chr17 48452327 48452439 -46820212 + MIR SINE MIR 32 149 -59 1 954 555 252 46 23 chr17 48453428 48453558 -46819093 - ETnERV2-int LTR ERVK -204 7202 7070 1 954 298 318 165 22 chr17 48453950 48454223 -46818428 + LTR16A LTR ERVL 27 338 -113 1 954 283 230 140 73 chr17 48454335 48454353 -46818298 + YREP_Mm Unknown Unknown 148 199 -1613 1 954 628 225 41 48 chr17 48454353 48454377 -46818274 - ID_B1 SINE B4 -1 223 206 1 954 2328 72 13 19 chr17 48454377 48454688 -46817963 - RLTR27 LTR ERVK 0 309 1 1 954 283 230 140 73 chr17 48454688 48454795 -46817856 + YREP_Mm Unknown Unknown 200 307 -1505 1 954 628 225 41 48 chr17 48454795 48454808 -46817843 - ID_B1 SINE B4 -19 205 80 1 954 905 128 226 6 chr17 48456461 48456642 -46816009 + URR1A DNA MER1_type 6 226 0 1 954 370 273 68 49 chr17 48456499 48456661 -46815990 - CYRA11_Mm Unknown Y-chromosome -301 316 152 1 954 216 250 0 0 chr17 48457339 48457379 -46815272 + B4A SINE B4 2 41 -251 1 954 1282 244 66 79 chr17 48457379 48457758 -46814893 + MTE2b LTR MaLR 1 374 -5 1 954 634 306 86 106 chr17 48457760 48458016 -46814635 + B4 SINE B4 42 292 0 1 954 632 254 31 36 chr17 48458065 48458261 -46814390 + B3A SINE B2 1 195 -3 1 954 214 192 0 100 chr17 48458660 48458727 -46813924 + MIR SINE MIR 99 161 -107 1 954 1221 71 8 0 chr17 48458736 48458989 -46813662 + (TCTA)n Simple_repeat Simple_repeat 1 254 0 1 954 452 282 15 44 chr17 48459063 48459200 -46813451 - ID_B1 SINE B4 -8 216 84 1 954 554 369 9 33 chr17 48459193 48459406 -46813245 - MER20 DNA MER1_type -11 208 1 1 954 704 223 115 35 chr17 48460678 48460878 -46811773 - B3 SINE B2 0 216 1 1 954 571 74 0 21 chr17 48461994 48462090 -46810561 + (GA)n Simple_repeat Simple_repeat 1 94 0 1 954 335 248 26 79 chr17 48462556 48462670 -46809981 + PB1D10 SINE Alu 11 118 -2 1 954 235 253 37 74 chr17 48462670 48462751 -46809900 + ID2 SINE ID 3 80 -3 1 954 782 229 119 5 chr17 48462956 48463149 -46809502 - B3 SINE B2 0 216 2 1 954 246 171 189 54 chr17 48464779 48464853 -46807798 - MIR SINE MIR -117 145 62 1 954 1347 254 13 79 chr17 48465196 48465398 -46807253 - MTE2b LTR MaLR -7 372 171 1 954 429 36 0 0 chr17 48465398 48465453 -46807198 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 954 1347 254 13 79 chr17 48465453 48465631 -46807020 - MTE2b LTR MaLR -209 170 17 1 954 490 233 146 8 chr17 48465858 48465988 -46806663 + B1_Mur1 SINE Alu 1 148 -1 1 954 284 292 8 55 chr17 48466236 48466363 -46806288 + L1M5 LINE L1 4934 5054 -1092 1 954 872 158 15 0 chr17 48466373 48466506 -46806145 + B1_Mur2 SINE Alu 1 135 -14 1 954 1124 82 0 39 chr17 48466521 48466674 -46805977 + B1_Mus1 SINE Alu 2 148 0 1 954 183 36 0 127 chr17 48466676 48466739 -46805912 + A-rich Low_complexity Low_complexity 1 55 0 1 954 1413 51 0 0 chr17 48466749 48466927 -46805724 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 1 954 396 0 0 0 chr17 48466937 48466981 -46805670 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 1 954 301 290 47 57 chr17 48466996 48467102 -46805549 + L1M5 LINE L1 5061 5165 -981 1 954 236 262 36 36 chr17 48467256 48467339 -46805312 + RSINE1 SINE B4 43 125 -40 1 954 2132 162 58 5 chr17 48467373 48467751 -46804900 - RMER10B LTR ERVL 0 398 1 1 954 457 250 68 8 chr17 48467765 48467882 -46804769 + RSINE1 SINE B4 2 125 -40 1 954 239 312 0 63 chr17 48468317 48468423 -46804228 - ID2 SINE ID -53 99 2 1 954 284 291 11 11 chr17 48468889 48468976 -46803675 + RLTR24 LTR ERV1 1 87 -442 1 954 361 272 87 106 chr17 48469326 48469534 -46803117 + MT2B LTR ERVL 58 257 -327 1 954 788 156 8 16 chr17 48469443 48469567 -46803084 + B1_Mus2 SINE Alu 13 135 -12 1 954 256 333 46 86 chr17 48469447 48469598 -46803053 + B4A SINE B4 102 246 -46 1 954 531 165 8 23 chr17 48469598 48469728 -46802923 + G-rich Low_complexity Low_complexity 1 128 0 1 954 740 263 49 46 chr17 48470894 48471277 -46801374 + RLTR19-int LTR ERVK 2050 2653 -3484 1 954 1928 249 73 101 chr17 48471746 48472695 -46799956 + RLTR19-int LTR ERVK 3458 4379 -1758 1 954 252 0 0 0 chr17 48472749 48472777 -46799874 + (A)n Simple_repeat Simple_repeat 1 28 0 1 954 3365 73 28 0 chr17 48472927 48473351 -46799300 - RLTR10C LTR ERVK 0 436 1 1 954 896 279 14 160 chr17 48473424 48473906 -46798745 + RLTR11B LTR ERVK 1 412 -41 1 954 250 263 145 0 chr17 48474065 48474141 -46798510 + RLTR24 LTR ERV1 1 87 -442 1 954 1303 227 118 24 chr17 48474707 48475090 -46797561 - MTD LTR MaLR 0 419 1 1 954 465 308 105 38 chr17 48475395 48475634 -46797017 - MLT1J2 LTR MaLR -120 328 62 1 954 1246 55 0 0 chr17 48475635 48475781 -46796870 + B1_Mus1 SINE Alu 3 148 0 1 954 243 0 0 0 chr17 48475781 48475808 -46796843 + (A)n Simple_repeat Simple_repeat 1 27 0 1 954 192 77 0 0 chr17 48475823 48475849 -46796802 + (TTC)n Simple_repeat Simple_repeat 2 27 0 1 954 585 203 17 0 chr17 48475864 48475982 -46796669 + PB1D7 SINE Alu 1 120 0 1 954 808 313 67 53 chr17 48476526 48476901 -46795750 - MER21B LTR ERV1 -463 400 21 1 954 199 133 44 0 chr17 48477060 48477105 -46795546 + GA-rich Low_complexity Low_complexity 2 48 0 1 954 463 271 8 54 chr17 48477548 48477677 -46794974 - RSINE1 SINE B4 -40 125 3 1 954 226 321 35 58 chr17 48477677 48477846 -46794805 - YREP_Mm Unknown Unknown -1466 346 182 1 954 507 273 0 8 chr17 48477728 48477850 -46794801 + ID_B1 SINE B4 103 223 -1 1 954 320 235 0 36 chr17 48477861 48477945 -46794706 + L1MC5 LINE L1 6626 6706 -1255 1 954 1093 252 38 88 chr17 48477946 48478007 -46794644 - MTE2a LTR MaLR -2 377 317 1 954 207 0 0 0 chr17 48478007 48478030 -46794621 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 954 1093 261 43 86 chr17 48478030 48478368 -46794283 - MTE2a LTR MaLR -64 355 20 1 954 4765 123 23 11 chr17 48478372 48478422 -46794229 + RMER6A LTR ERVK 1 58 -698 1 954 180 0 0 0 chr17 48478422 48478442 -46794209 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1 954 4765 123 23 11 chr17 48478442 48479138 -46793513 + RMER6A LTR ERVK 59 755 -1 1 954 346 273 23 0 chr17 48479184 48479272 -46793379 - PB1D10 SINE Alu -7 110 21 1 954 354 330 0 0 chr17 48479290 48479378 -46793273 + MTE2a LTR MaLR 10 97 -282 1 954 782 266 28 37 chr17 48479393 48479608 -46793043 + MTE2a LTR MaLR 167 379 0 1 954 259 276 88 47 chr17 48479622 48479793 -46792858 + L1MC5 LINE L1 6710 6887 -1074 1 954 233 282 75 83 chr17 48479793 48479832 -46792819 + B4A SINE B4 55 151 -141 1 954 337 189 81 0 chr17 48479832 48479906 -46792745 + PB1D9 SINE Alu 2 81 -39 1 954 473 229 121 34 chr17 48480361 48480510 -46792141 - RSINE1 SINE B4 -2 163 2 1 954 3246 114 36 20 chr17 48480586 48481039 -46791612 + RLTR20B2 LTR ERVK 3 464 -96 1 954 369 0 0 0 chr17 48481039 48481080 -46791571 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 954 3246 114 36 20 chr17 48481080 48481126 -46791525 + RLTR20B2 LTR ERVK 465 510 -50 1 954 180 0 0 0 chr17 48481200 48481220 -46791431 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 954 273 275 29 81 chr17 48481322 48481496 -46791155 + L1MC5 LINE L1 7346 7510 -451 1 954 501 190 38 1 chr17 48481587 48481698 -46790953 + B4 SINE B4 1 119 -46 1 954 301 61 122 0 chr17 48481698 48481747 -46790904 - L1_Mus3 LINE L1 -263 6375 6321 1 954 1576 97 12 25 chr17 48481747 48481991 -46790660 + L1_Mus3 LINE L1 6398 6638 0 1 954 1147 89 6 6 chr17 48482025 48482184 -46790467 + B2_Mm1a SINE B2 2 160 -33 1 954 252 86 0 0 chr17 48482184 48482219 -46790432 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 1 954 660 26 0 0 chr17 48482226 48482304 -46790347 + (GAAAA)n Simple_repeat Simple_repeat 5 82 0 1 954 759 247 0 19 chr17 48482884 48483041 -46789610 + B4 SINE B4 79 232 -60 1 954 4097 117 89 6 chr17 48483041 48483667 -46788984 - RLTR33 LTR ERVK 0 678 1 1 954 261 163 0 0 chr17 48483875 48483924 -46788727 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 954 184 250 0 0 chr17 48484203 48484243 -46788408 + L2c LINE L2 3029 3068 -319 1 954 1152 75 62 28 chr17 48484349 48484501 -46788150 + B2_Mm1a SINE B2 1 160 -33 1 954 387 0 0 0 chr17 48484501 48484544 -46788107 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 1 954 1152 75 62 28 chr17 48484544 48484570 -46788081 + B2_Mm1a SINE B2 161 185 -8 1 954 1342 109 10 5 chr17 48484581 48484775 -46787876 + B2_Mm2 SINE B2 1 195 0 1 954 1303 105 27 59 chr17 48484860 48485082 -46787569 + ORR1C2 LTR MaLR 170 384 0 1 954 280 269 37 37 chr17 48485082 48485188 -46787463 + RMER15 LTR ERVL 470 575 0 1 954 186 274 113 14 chr17 48485314 48485395 -46787256 - MIRm SINE MIR -105 157 70 1 954 223 167 24 0 chr17 48485675 48485717 -46786934 + CT-rich Low_complexity Low_complexity 4 46 0 1 954 596 309 43 72 chr17 48487048 48487238 -46785413 + B4 SINE B4 10 193 -99 1 954 1041 267 40 107 chr17 48487238 48487641 -46785010 - MTE2b LTR MaLR 0 379 4 1 954 596 309 43 72 chr17 48487641 48487726 -46784925 + B4 SINE B4 194 277 -15 1 954 447 309 99 40 chr17 48488186 48488409 -46784242 - RMER15 LTR ERVL 0 575 340 1 954 1046 211 39 14 chr17 48489999 48490206 -46782445 - ID_B1 SINE B4 -11 213 2 1 954 2794 235 104 61 chr17 48491631 48492231 -46780420 - RMER13A LTR ERVK 0 860 254 1 954 2264 140 42 40 chr17 48492231 48492632 -46780019 - RLTR9D LTR ERVK -1 402 1 1 954 2794 235 104 61 chr17 48492632 48492855 -46779796 - RMER13A LTR ERVK -607 253 1 1 954 297 250 40 0 chr17 48492876 48492952 -46779699 - ID4 SINE ID 0 83 5 1 954 1060 221 42 172 chr17 48493022 48493453 -46779198 - MTE2a LTR MaLR 0 379 5 1 954 180 298 250 71 chr17 48493957 48494141 -46778510 - L2a LINE L2 -46 3380 3164 1 954 1046 263 36 139 chr17 48494244 48494655 -46777996 - MTE2a LTR MaLR -8 371 3 1 954 2507 71 0 0 chr17 48494655 48494978 -46777673 + L1Md_F2 LINE L1 6260 6582 0 1 954 442 162 0 0 chr17 48495605 48495679 -46776972 - ORR1C2 LTR MaLR -226 158 85 1 954 1284 209 109 87 chr17 48495678 48495821 -46776830 + ORR1C1 LTR MaLR 14 164 -214 1 954 1002 146 0 0 chr17 48495821 48495992 -46776659 + (TCC)n Simple_repeat Simple_repeat 2 172 0 1 954 1284 209 109 87 chr17 48495992 48496205 -46776446 + ORR1C1 LTR MaLR 165 378 0 1 954 837 216 7 0 chr17 48496248 48496396 -46776255 + B3A SINE B2 9 157 -41 1 954 627 84 0 0 chr17 48496411 48496506 -46776145 + (CA)n Simple_repeat Simple_repeat 1 95 0 1 954 577 209 198 14 chr17 48496568 48496585 -46776066 - B4 SINE B4 -22 202 123 1 119 858 48 0 0 chr17 48496585 48496689 -46775962 - B1_Mm SINE Alu -43 104 1 1 955 577 209 198 14 chr17 48496689 48496702 -46775949 - B4 SINE B4 -22 122 49 1 955 291 28 0 0 chr17 48496702 48496738 -46775913 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 1 955 1178 56 0 7 chr17 48496738 48496882 -46775769 - B1_Mus2 SINE Alu -4 143 1 1 955 577 209 225 12 chr17 48496882 48496924 -46775727 - B4 SINE B4 -244 48 2 1 955 198 118 0 0 chr17 48497227 48497261 -46775390 + (GGGA)n Simple_repeat Simple_repeat 2 35 0 1 955 326 275 104 40 chr17 48497528 48497760 -46774891 + ORR1E LTR MaLR 18 321 -49 1 955 578 257 257 0 chr17 48498102 48498273 -46774378 + B3 SINE B2 2 216 0 1 955 961 229 23 5 chr17 48498307 48498526 -46774125 + ID_B1 SINE B4 1 223 -1 1 955 183 42 0 0 chr17 48499273 48499297 -46773354 + (CTG)n Simple_repeat Simple_repeat 1 24 0 1 955 183 80 0 0 chr17 48499975 48500000 -46772651 + (TC)n Simple_repeat Simple_repeat 1 25 0 1 955 342 0 0 0 chr17 48500000 48500038 -46772613 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 955 288 0 0 0 chr17 48500167 48500199 -46772452 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 955 683 271 167 5 chr17 48500227 48500442 -46772209 - B4A SINE B4 -41 251 2 3 955 5225 149 34 8 chr17 48500496 48501381 -46771270 - RMER13B LTR ERVK 0 908 1 4 955 517 247 21 72 chr17 48501441 48501596 -46771055 - B1F SINE Alu -1 148 1 5 955 476 329 17 90 chr17 48501596 48501618 -46771033 - ID_B1 SINE B4 -1 223 60 6 955 38 68 0 0 chr17 48501620 48501693 -46770958 + AT_rich Low_complexity Low_complexity 1 73 0 7 955 1094 211 14 0 chr17 48501825 48502033 -46770618 + B3 SINE B2 1 211 -5 8 955 264 77 0 0 chr17 48502277 48502316 -46770335 + (TCTG)n Simple_repeat Simple_repeat 4 42 0 9 955 550 299 15 0 chr17 48502338 48502472 -46770179 - RSINE1 SINE B4 -16 149 14 1 955 1017 237 72 29 chr17 48502625 48502903 -46769748 - B4A SINE B4 -2 290 1 1 955 368 234 129 30 chr17 48502904 48503036 -46769615 - B1_Mus1 SINE Alu 0 148 4 1 955 922 191 60 35 chr17 48503263 48503464 -46769187 - ORR1D1 LTR MaLR -3 371 166 1 955 261 197 98 0 chr17 48503495 48503556 -46769095 - ORR1D1 LTR MaLR -198 186 120 1 955 381 230 129 18 chr17 48504406 48504522 -46768129 + B3A SINE B2 2 111 -82 1 955 326 319 62 96 chr17 48505489 48505526 -46767125 - B4 SINE B4 -37 255 162 1 955 573 215 76 15 chr17 48505526 48505658 -46766993 - B1_Mur1 SINE Alu 0 149 10 1 955 326 319 62 96 chr17 48505658 48505697 -46766954 - B4 SINE B4 -37 161 55 1 955 453 181 0 67 chr17 48505660 48505749 -46766902 - B1_Mur1 SINE Alu 0 149 67 1 955 704 220 0 12 chr17 48506509 48506770 -46765881 + (TG)n Simple_repeat Simple_repeat 1 257 0 1 955 836 259 107 30 chr17 48506770 48507041 -46765610 - B4A SINE B4 0 292 1 1 955 279 307 0 0 chr17 48507554 48507629 -46765022 - MIR SINE MIR -176 86 12 2 955 599 106 10 96 chr17 48508181 48508251 -46764400 - ORR1B2 LTR MaLR 0 378 318 2 955 3996 105 43 9 chr17 48508251 48508828 -46763823 - MT2B LTR ERVL -4 597 1 2 955 599 106 10 96 chr17 48508828 48508861 -46763790 - ORR1B2 LTR MaLR -61 317 284 2 955 868 163 0 7 chr17 48508839 48508987 -46763664 - ORR1B2 LTR MaLR -215 152 6 2 955 4338 165 90 36 chr17 48508989 48509649 -46763002 - ORR1B2-int LTR MaLR 0 1509 795 2 955 2369 67 36 48 chr17 48509649 48509980 -46762671 - ORR1A2 LTR MaLR 0 327 1 2 955 4338 165 90 36 chr17 48509980 48510217 -46762434 - ORR1B2-int LTR MaLR -715 794 560 2 955 1597 42 5 0 chr17 48510217 48510409 -46762242 - B2_Mm1t SINE B2 0 193 1 2 955 4338 165 90 36 chr17 48510409 48510454 -46762197 - ORR1B2-int LTR MaLR -950 559 515 2 955 3080 135 106 4 chr17 48510462 48510982 -46761669 - RMER4B LTR ERVK -12 573 1 2 955 2574 156 31 11 chr17 48510982 48511427 -46761224 - ORR1B2-int LTR MaLR -1007 502 49 2 955 730 169 203 22 chr17 48511586 48511768 -46760883 - B3 SINE B2 0 216 2 2 955 372 238 45 30 chr17 48512128 48512262 -46760389 - Lx7 LINE L1 0 7696 7561 2 955 373 235 0 34 chr17 48512905 48512993 -46759658 + B4A SINE B4 7 91 -201 2 955 648 221 174 38 chr17 48513076 48513288 -46759363 + RMER4B LTR ERVK 336 576 -9 2 955 786 285 72 36 chr17 48513937 48514027 -46758624 - B4 SINE B4 -32 260 172 3 955 3492 45 28 21 chr17 48514027 48514460 -46758191 + RLTR10C LTR ERVK 1 436 0 3 955 786 285 72 36 chr17 48514460 48514620 -46758031 - B4 SINE B4 -121 171 1 3 955 765 230 114 16 chr17 48514775 48515006 -46757645 + MTD LTR MaLR 1 265 -154 3 955 489 58 0 0 chr17 48515148 48515217 -46757434 + (TC)n Simple_repeat Simple_repeat 2 70 0 3 955 745 250 29 24 chr17 48515217 48515422 -46757229 + RMER10B LTR ERVL 193 398 0 3 955 599 165 109 8 chr17 48515427 48515555 -46757096 + MTD LTR MaLR 279 419 0 3 955 413 298 203 33 chr17 48515603 48515874 -46756777 + L2 LINE L2 2379 2695 -724 3 955 381 0 16 63 chr17 48515895 48515958 -46756693 + (TA)n Simple_repeat Simple_repeat 1 60 0 3 955 1684 245 87 93 chr17 48515998 48516952 -46755699 + RMER12 LTR ERVK 1 1224 -180 3 955 319 324 37 9 chr17 48516958 48517067 -46755584 + polypyrimidine Low_complexity Low_complexity 3 114 0 3 955 920 153 0 6 chr17 48517067 48517238 -46755413 + CT-rich Low_complexity Low_complexity 1 170 0 3 955 1278 85 0 0 chr17 48517262 48517439 -46755212 + (TTTCC)n Simple_repeat Simple_repeat 1 177 0 4 955 180 0 0 0 chr17 48517440 48517460 -46755191 + (TC)n Simple_repeat Simple_repeat 1 20 0 4 955 748 232 146 58 chr17 48517460 48517721 -46754930 + RMER12 LTR ERVK 995 1278 -44 4 955 241 246 18 0 chr17 48517952 48518009 -46754642 - Charlie4z DNA MER1_type 0 167 110 4 955 249 329 23 12 chr17 48518129 48518215 -46754436 - B3 SINE B2 -129 87 1 4 955 393 160 25 62 chr17 48518247 48518327 -46754324 + MTC LTR MaLR 1 77 -344 4 955 901 238 6 11 chr17 48518299 48518470 -46754181 + MTC LTR MaLR 197 366 -55 4 955 1797 183 66 17 chr17 48518470 48518778 -46753873 + ORR1B2 LTR MaLR 1 324 -43 4 955 3126 42 0 8 chr17 48518778 48519164 -46753487 + L1Md_F2 LINE L1 6199 6581 -1 4 955 351 0 0 0 chr17 48519164 48519203 -46753448 + (GA)n Simple_repeat Simple_repeat 2 40 0 4 955 1797 183 66 17 chr17 48519203 48519243 -46753408 + ORR1B2 LTR MaLR 325 366 -1 4 955 6156 189 17 32 chr17 48519243 48520476 -46752175 + ORR1B2-int LTR MaLR 1 1583 -209 4 955 690 138 68 15 chr17 48520476 48520608 -46752043 - RLTR23 LTR ERV1 -3 427 289 4 955 1405 102 92 17 chr17 48520613 48520871 -46751780 - ORR1A3 LTR MaLR -8 386 1 5 955 453 232 10 10 chr17 48521083 48521179 -46751472 - RLTR23 LTR ERV1 -330 100 5 4 955 1820 149 7 0 chr17 48521196 48521485 -46751166 + ORR1B2-int LTR MaLR 1217 1507 -2 5 955 1740 154 130 22 chr17 48521487 48521811 -46750840 + ORR1B2 LTR MaLR 1 359 -8 5 955 234 196 0 19 chr17 48521815 48521867 -46750784 + MTC LTR MaLR 361 411 -8 4 955 839 213 115 99 chr17 48522050 48522432 -46750219 + RMER6B LTR ERVK 1 451 -10 5 955 324 0 0 0 chr17 48522501 48522537 -46750114 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 955 365 242 33 11 chr17 48523000 48523090 -46749561 + B4A SINE B4 3 94 -198 5 955 2342 107 3 0 chr17 48523090 48523408 -46749243 + ORR1A2 LTR MaLR 1 319 -8 5 955 1018 227 16 0 chr17 48523413 48523598 -46749053 + B4A SINE B4 99 286 -6 5 955 2066 120 27 52 chr17 48523659 48524027 -46748624 + RLTR15 LTR ERVK 1 359 0 5 955 375 118 0 0 chr17 48524528 48524579 -46748072 + RLTR33 LTR ERVK 197 247 -431 5 955 1622 144 28 18 chr17 48524575 48524857 -46747794 + RLTR23 LTR ERV1 146 430 0 5 955 1767 169 180 25 chr17 48524857 48525257 -46747394 - RMER1B Other Other -39 1027 566 5 955 2004 118 39 3 chr17 48525261 48525568 -46747083 + ORR1A3 LTR MaLR 1 318 -8 6 955 289 208 118 33 chr17 48525572 48525692 -46746959 - RMER1B Other Other -524 542 448 6 955 316 307 113 9 chr17 48525697 48525812 -46746839 - B4A SINE B4 -123 169 43 6 955 258 121 43 57 chr17 48526133 48526203 -46746448 + A-rich Low_complexity Low_complexity 4 72 0 6 955 24 0 0 0 chr17 48526222 48526246 -46746405 + AT_rich Low_complexity Low_complexity 1 24 0 6 955 186 43 0 0 chr17 48526561 48526584 -46746067 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 955 288 53 0 0 chr17 48527205 48527243 -46745408 + (CTGGGG)n Simple_repeat Simple_repeat 1 38 0 6 955 309 51 0 0 chr17 48527247 48527286 -46745365 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 955 214 328 31 15 chr17 48527286 48527351 -46745300 + ID4_ SINE ID 16 81 -2 6 955 339 264 33 33 chr17 48529344 48529434 -46743217 + B1F1 SINE Alu 9 98 -51 6 955 274 161 92 46 chr17 48529956 48530021 -46742630 - tRNA-Cys-TGY tRNA tRNA 0 75 8 7 955 240 250 29 86 chr17 48529967 48530037 -46742614 - ID4_ SINE ID -16 67 2 7 955 386 191 93 19 chr17 48530037 48530144 -46742507 - B1F1 SINE Alu -7 142 28 7 955 332 297 57 13 chr17 48530144 48530194 -46742457 - ID_B1 SINE B4 -7 217 54 7 955 286 43 0 60 chr17 48531838 48531888 -46740763 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 7 955 826 191 77 2 chr17 48532938 48533115 -46739536 - B3 SINE B2 0 198 1 7 955 283 299 50 30 chr17 48533175 48533275 -46739376 + PB1D10 SINE Alu 14 115 -2 7 955 253 295 11 11 chr17 48533610 48533699 -46738952 + MTEa LTR MaLR 250 338 -41 7 955 392 148 89 8 chr17 48535260 48535349 -46737302 - PB1D9 SINE Alu -16 104 13 7 955 597 269 30 13 chr17 48535404 48535556 -46737095 - B3A SINE B2 -54 141 1 7 955 458 269 80 176 chr17 48536607 48536909 -46735742 - B4A SINE B4 -19 273 1 8 955 434 247 32 0 chr17 48537333 48537426 -46735225 + URR1B DNA MER1_type 1 96 -129 8 955 219 69 0 0 chr17 48539974 48540003 -46732648 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 955 313 241 84 0 chr17 48540119 48540202 -46732449 + PB1D7 SINE Alu 1 90 -30 8 955 295 238 138 0 chr17 48540481 48540561 -46732090 - MLT2B3 LTR ERVL -460 94 4 8 955 325 321 21 49 chr17 48540762 48540906 -46731745 + ID_B1 SINE B4 64 203 -21 8 955 378 272 35 49 chr17 48540785 48540928 -46731723 + B1F SINE Alu 5 145 -4 8 955 368 212 113 21 chr17 48540994 48541100 -46731551 + B1F1 SINE Alu 7 140 -9 8 955 3240 51 5 10 chr17 48541405 48541804 -46730847 - MTB LTR MaLR -3 397 1 8 955 1178 215 170 106 chr17 48542060 48542116 -46730535 - MT2A LTR ERVL -1 532 467 8 955 210 71 0 0 chr17 48542116 48542144 -46730507 + (TG)n Simple_repeat Simple_repeat 1 28 0 9 955 1178 215 170 106 chr17 48542144 48542492 -46730159 - MT2A LTR ERVL -67 466 85 8 955 4771 36 0 7 chr17 48542492 48543053 -46729598 + L1Md_T LINE L1 6026 6582 0 9 955 1178 215 170 106 chr17 48543053 48543146 -46729505 - MT2A LTR ERVL -449 84 3 8 955 575 259 245 33 chr17 48543153 48543582 -46729069 - L1_Rod LINE L1 -54 5826 5311 9 955 754 229 109 5 chr17 48543632 48543825 -46728826 + B4 SINE B4 5 217 -75 9 955 1342 97 32 0 chr17 48543955 48544140 -46728511 - B2_Mm1t SINE B2 -2 191 1 9 955 379 207 0 118 chr17 48544194 48544287 -46728364 + 5S rRNA rRNA 8 89 -32 9 955 298 279 37 28 chr17 48544401 48544508 -46728143 + L1ME2z LINE L1 6336 6443 -1 9 955 336 287 170 37 chr17 48544833 48545104 -46727547 - L1MA7 LINE L1 -374 5917 5611 9 955 1254 186 122 4 chr17 48545134 48545404 -46727247 + MT2A LTR ERVL 1 302 -231 9 955 649 245 138 11 chr17 48545473 48545787 -46726864 - L1MA7 LINE L1 -728 5572 5224 9 955 483 205 3 0 chr17 48545928 48546021 -46726630 - B1_Mus2 SINE Alu -17 103 9 9 955 186 133 0 0 chr17 48549027 48549057 -46723594 + (CCG)n Simple_repeat Simple_repeat 2 31 0 1 955 339 130 0 0 chr17 48551060 48551114 -46721537 + (T)n Simple_repeat Simple_repeat 1 54 0 1 955 504 246 61 14 chr17 48551148 48551296 -46721355 - B4A SINE B4 -137 155 1 1 955 590 266 0 7 chr17 48551407 48551547 -46721104 - B1F SINE Alu -2 147 9 1 955 453 292 8 16 chr17 48551568 48551690 -46720961 + B1_Mur1 SINE Alu 9 129 -20 1 955 776 184 13 58 chr17 48551926 48552082 -46720569 + B1_Mur4 SINE Alu 1 149 -1 1 955 776 152 8 0 chr17 48552172 48552290 -46720361 + B1_Mur3 SINE Alu 9 127 -22 1 955 513 299 42 117 chr17 48552358 48552472 -46720179 + B4A SINE B4 4 94 -198 1 955 3343 38 2 37 chr17 48552472 48552882 -46719769 - MTA_Mm LTR MaLR 0 396 1 1 955 513 299 42 117 chr17 48552882 48553032 -46719619 + B4A SINE B4 95 248 -44 1 955 590 281 87 38 chr17 48553054 48553239 -46719412 + B3A SINE B2 4 197 -1 1 955 242 310 17 0 chr17 48553243 48553301 -46719350 + B4A SINE B4 212 270 -22 1 955 261 0 0 0 chr17 48553332 48553361 -46719290 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 955 511 165 51 31 chr17 48555188 48555352 -46717299 - B3 SINE B2 -1 197 22 1 955 529 273 47 41 chr17 48558159 48558331 -46714320 - B4A SINE B4 -118 174 2 1 955 315 270 67 75 chr17 48559153 48559273 -46713378 - B1_Mur1 SINE Alu 0 149 31 1 955 474 236 9 35 chr17 48559560 48559674 -46712977 - RSINE1 SINE B4 -29 136 26 1 955 475 275 87 0 chr17 48559899 48560048 -46712603 + RSINE1 SINE B4 2 163 -2 1 955 287 115 121 60 chr17 48560108 48560191 -46712460 - PB1D10 SINE Alu -1 116 29 1 955 303 268 71 20 chr17 48560316 48560415 -46712236 - B1F SINE Alu -36 113 10 1 955 878 205 35 10 chr17 48561460 48561657 -46710994 + B3 SINE B2 3 204 -12 1 955 430 235 17 6 chr17 48561782 48561897 -46710754 - B3 SINE B2 -81 117 2 1 955 523 244 124 6 chr17 48561915 48562076 -46710575 - B3A SINE B2 -18 180 1 1 955 673 279 4 19 chr17 48562953 48563139 -46709512 + B3A SINE B2 17 189 -6 1 955 606 186 9 0 chr17 48563148 48563272 -46709379 - B1_Mur2 SINE Alu -21 129 4 1 955 321 379 56 0 chr17 48563504 48563665 -46708986 - LTR83 LTR ERVL -510 270 101 1 955 954 261 89 16 chr17 48563894 48564209 -46708442 + MTEb LTR MaLR 1 338 -41 1 955 244 240 0 0 chr17 48564576 48564626 -46708025 - RSINE1 SINE B4 -15 150 101 1 955 415 296 95 18 chr17 48564844 48564905 -46707746 - RLTR20B2 LTR ERVK -9 519 447 1 955 360 0 0 0 chr17 48564905 48564945 -46707706 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 955 415 292 93 21 chr17 48564945 48565047 -46707604 - RLTR20B2 LTR ERVK -94 466 355 1 955 429 246 35 84 chr17 48565109 48565251 -46707400 - RLTR20B2 LTR ERVK -406 154 20 1 955 459 0 0 0 chr17 48565901 48565952 -46706699 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 955 252 0 0 0 chr17 48567027 48567055 -46705596 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 955 1187 48 0 0 chr17 48567138 48567285 -46705366 + B1_Mus2 SINE Alu 1 147 0 1 955 661 199 7 78 chr17 48567777 48567930 -46704721 + B1_Mur2 SINE Alu 5 146 -3 1 955 563 320 63 68 chr17 48567935 48568234 -46704417 + B4A SINE B4 16 284 -8 1 955 213 211 0 0 chr17 48569156 48569194 -46703457 + (CACCAT)n Simple_repeat Simple_repeat 5 42 0 1 955 672 226 0 27 chr17 48569241 48569391 -46703260 - RSINE1 SINE B4 -17 148 3 1 955 282 352 43 0 chr17 48569391 48569530 -46703121 - MER63A DNA AcHobo -65 145 1 1 955 375 130 39 20 chr17 48570156 48570258 -46702393 + CT-rich Low_complexity Low_complexity 2 105 0 1 955 242 279 33 44 chr17 48570718 48570808 -46701843 - MIR3 SINE MIR -3 205 117 1 955 181 246 82 0 chr17 48570991 48571052 -46701599 + L3 LINE CR1 2171 2236 -2253 1 955 688 211 0 26 chr17 48571460 48571599 -46701052 + B1F2 SINE Alu 3 138 -11 1 955 378 0 0 0 chr17 48571599 48571641 -46701010 + (TTAA)n Simple_repeat Simple_repeat 1 42 0 1 955 688 211 0 26 chr17 48571641 48571652 -46700999 + B1F2 SINE Alu 139 149 0 1 955 358 327 7 13 chr17 48572559 48572711 -46699940 - B4A SINE B4 -13 279 129 1 955 202 301 184 0 chr17 48572790 48572926 -46699725 - L2a LINE L2 -39 3387 3227 1 955 238 214 0 35 chr17 48573001 48573059 -46699592 - PB1D10 SINE Alu -2 115 60 1 955 710 247 39 69 chr17 48573090 48573294 -46699357 - B3A SINE B2 0 198 1 1 955 405 293 35 0 chr17 48573599 48573715 -46698936 + ID_B1 SINE B4 88 207 -17 1 955 468 0 0 0 chr17 48573723 48573775 -46698876 + (CTATA)n Simple_repeat Simple_repeat 1 52 0 1 955 326 227 53 0 chr17 48573999 48574074 -46698577 + ID4_ SINE ID 3 81 -2 1 955 794 217 86 0 chr17 48574014 48574189 -46698462 + ID_B1 SINE B4 22 211 -13 1 955 218 367 22 11 chr17 48574637 48574728 -46697923 - L2b LINE L2 0 3375 3284 1 955 547 275 48 31 chr17 48574964 48575193 -46697458 + B4A SINE B4 8 240 -52 1 955 221 188 116 72 chr17 48575523 48575592 -46697059 + MIR SINE MIR 58 129 -79 1 955 267 271 27 45 chr17 48576300 48576412 -46696239 - MIR SINE MIR -65 197 88 1 955 486 0 0 0 chr17 48577921 48577975 -46694676 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 955 459 353 15 0 chr17 48578087 48578291 -46694360 + ID_B1 SINE B4 5 211 -13 1 955 325 0 44 0 chr17 48578295 48578340 -46694311 + (CAA)n Simple_repeat Simple_repeat 2 48 0 1 955 305 294 59 0 chr17 48578355 48578440 -46694211 + RSINE1 SINE B4 2 91 -74 1 955 526 205 111 55 chr17 48578719 48578900 -46693751 + ID_B1 SINE B4 1 191 -33 1 955 477 0 0 0 chr17 48578907 48578960 -46693691 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 955 387 0 0 0 chr17 48578960 48579002 -46693649 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 955 596 301 61 75 chr17 48579043 48579405 -46693246 + ORR1E LTR MaLR 1 357 -2 1 955 711 182 4 19 chr17 48579521 48579780 -46692871 + (TATG)n Simple_repeat Simple_repeat 1 254 0 1 955 619 259 58 19 chr17 48579785 48579990 -46692661 - B3 SINE B2 -2 214 2 1 955 3732 148 108 75 chr17 48580157 48581031 -46691620 + RMER19B LTR ERVK 1 902 0 1 955 210 143 0 0 chr17 48581153 48581188 -46691463 + (ATG)n Simple_repeat Simple_repeat 1 35 0 1 955 564 282 0 0 chr17 48581238 48581362 -46691289 + RSINE1 SINE B4 6 129 -36 1 955 1114 36 7 7 chr17 48581405 48581546 -46691105 - B1_Mus2 SINE Alu -5 142 2 1 955 822 185 0 0 chr17 48581579 48581725 -46690926 + B1_Mus1 SINE Alu 3 148 0 1 955 32 57 0 0 chr17 48581761 48581814 -46690837 + AT_rich Low_complexity Low_complexity 1 53 0 1 955 464 269 93 7 chr17 48581814 48581964 -46690687 - RSINE1 SINE B4 0 165 3 1 955 777 165 31 22 chr17 48581990 48582162 -46690489 + B3 SINE B2 1 187 -6 1 955 715 274 16 16 chr17 48582173 48582343 -46690308 + B3A SINE B2 4 173 -25 1 955 441 0 0 0 chr17 48582343 48582392 -46690259 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 955 715 286 20 37 chr17 48582392 48582440 -46690211 + B3A SINE B2 172 216 0 1 955 369 0 0 0 chr17 48582679 48582720 -46689931 + (TC)n Simple_repeat Simple_repeat 1 41 0 1 955 238 287 175 23 chr17 48582770 48582941 -46689710 - MIRb SINE MIR -9 259 63 1 955 339 274 35 26 chr17 48583616 48583732 -46688919 + RLTR23 LTR ERV1 314 430 0 1 955 1357 228 111 23 chr17 48583733 48584165 -46688486 + RMER5 LTR ERV1 59 528 -6 1 955 378 0 0 0 chr17 48584165 48584207 -46688444 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 955 279 269 12 60 chr17 48584214 48584297 -46688354 - B4A SINE B4 -2 290 212 1 955 897 222 5 11 chr17 48584304 48584495 -46688156 - B3 SINE B2 0 216 27 1 955 1184 34 0 0 chr17 48584512 48584658 -46687993 - B1_Mm SINE Alu 0 147 2 1 955 189 195 0 0 chr17 48584699 48584740 -46687911 + (CACCAT)n Simple_repeat Simple_repeat 4 44 0 1 955 274 268 37 186 chr17 48584740 48584752 -46687899 - B4A SINE B4 -63 229 167 1 955 719 176 0 118 chr17 48584752 48584913 -46687738 - B1_Mur2 SINE Alu -7 142 1 1 955 274 268 37 186 chr17 48584913 48584928 -46687723 - B4A SINE B4 -63 166 70 1 955 531 294 38 0 chr17 48584962 48585122 -46687529 - B4 SINE B4 -126 166 1 1 955 353 235 50 30 chr17 48586058 48586159 -46686492 + B1F SINE Alu 2 104 -45 1 955 387 0 0 0 chr17 48586465 48586508 -46686143 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 955 558 162 219 12 chr17 48587019 48587188 -46685463 + RMER10B LTR ERVL 7 210 -188 1 955 392 257 56 28 chr17 48587267 48587278 -46685373 - PB1D10 SINE Alu 0 117 7 1 955 450 255 0 31 chr17 48587278 48587375 -46685276 - ID_B1 SINE B4 -43 181 88 1 955 496 273 12 36 chr17 48587407 48587574 -46685077 - RSINE1 SINE B4 0 165 3 1 955 212 203 65 104 chr17 48588632 48588709 -46683942 + ID4_ SINE ID 4 77 -6 1 955 1068 127 12 0 chr17 48588643 48588816 -46683835 + B2_Mm2 SINE B2 13 187 -8 1 955 597 268 35 18 chr17 48588823 48588994 -46683657 + B3 SINE B2 38 211 -5 1 955 232 146 20 20 chr17 48589808 48589857 -46682794 + RMER15 LTR ERVL 1 49 -526 1 955 293 180 45 0 chr17 48589860 48589949 -46682702 + GA-rich Low_complexity Low_complexity 2 94 0 1 955 407 269 10 0 chr17 48589966 48590070 -46682581 + RMER15 LTR ERVL 454 558 -17 1 955 183 214 71 0 chr17 48590335 48590377 -46682274 - L4 LINE RTE -537 1492 1448 1 955 189 214 0 0 chr17 48591058 48591100 -46681551 + CT-rich Low_complexity Low_complexity 2 43 0 1 955 244 374 62 48 chr17 48591872 48591884 -46680767 - B3 SINE B2 -4 212 201 1 955 240 111 0 0 chr17 48591884 48591920 -46680731 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 955 273 343 83 56 chr17 48591920 48592000 -46680651 - B3A SINE B2 -16 200 2 1 955 423 252 157 0 chr17 48592000 48592115 -46680536 - B4 SINE B4 -158 134 2 2 955 198 0 0 0 chr17 48592116 48592138 -46680513 + (CTAA)n Simple_repeat Simple_repeat 3 24 0 2 955 652 170 7 7 chr17 48592138 48592274 -46680377 + CT-rich Low_complexity Low_complexity 2 137 0 2 955 996 133 0 16 chr17 48592276 48592459 -46680192 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 2 955 1850 134 97 26 chr17 48592481 48592863 -46679788 + RLTR9E LTR ERVK 1 409 0 2 955 702 217 25 73 chr17 48592886 48593090 -46679561 + B3A SINE B2 5 198 0 2 955 822 263 54 57 chr17 48593111 48593426 -46679225 - L1MA6 LINE L1 -1 6299 5986 2 955 316 250 12 0 chr17 48593439 48593523 -46679128 + L1M2 LINE L1 5684 5768 -532 2 955 282 255 111 10 chr17 48593759 48593858 -46678793 + MER5A1 DNA MER1_type 25 133 -33 2 955 405 58 0 0 chr17 48594539 48594591 -46678060 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 955 292 254 75 0 chr17 48594597 48594664 -46677987 - ID4 SINE ID -10 73 2 2 955 198 0 0 0 chr17 48594683 48594705 -46677946 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 2 955 896 141 0 0 chr17 48594705 48594840 -46677811 - B1_Mur1 SINE Alu -13 136 2 2 955 440 246 43 36 chr17 48594846 48594985 -46677666 - B1F1 SINE Alu -7 142 3 2 955 183 233 11 43 chr17 48595707 48595801 -46676850 + CT-rich Low_complexity Low_complexity 3 93 0 2 955 801 199 129 16 chr17 48595830 48596024 -46676627 - B3 SINE B2 0 216 1 2 955 559 117 10 10 chr17 48596038 48596142 -46676509 + (TTCC)n Simple_repeat Simple_repeat 4 107 0 2 955 296 180 174 11 chr17 48596145 48596237 -46676414 - PB1D10 SINE Alu -5 112 11 2 955 342 0 0 0 chr17 48596330 48596368 -46676283 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 955 206 316 26 0 chr17 48596446 48596522 -46676129 + MIR SINE MIR 119 196 -66 2 955 804 276 14 5 chr17 48597823 48598041 -46674610 + B4A SINE B4 5 224 -68 2 955 825 101 34 86 chr17 48598087 48598271 -46674380 + B2_Mm2 SINE B2 1 209 -7 2 955 413 268 43 6 chr17 48598305 48598443 -46674208 - PB1D10 SINE Alu -24 93 9 2 955 221 277 115 9 chr17 48598465 48598578 -46674073 - MIR3 SINE MIR -71 137 13 2 955 391 245 78 0 chr17 48598628 48598730 -46673921 - PB1D10 SINE Alu -7 110 1 2 955 405 54 0 0 chr17 48598745 48598801 -46673850 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 955 238 286 63 120 chr17 48599360 48599535 -46673116 + Zaphod2 DNA Tip100 42 206 -3318 2 955 826 223 60 0 chr17 48600421 48600605 -46672046 - RMER30 DNA MER1_type -1 201 7 2 955 198 0 0 0 chr17 48600675 48600697 -46671954 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2 955 867 53 0 0 chr17 48600697 48600811 -46671840 - B1_Mus1 SINE Alu -9 139 26 2 955 377 299 83 22 chr17 48601021 48601294 -46671357 - MTE2b LTR MaLR 0 379 15 2 955 221 175 0 24 chr17 48602055 48602076 -46670575 + polypyrimidine Low_complexity Low_complexity 21 41 0 2 955 534 16 0 0 chr17 48602076 48602139 -46670512 + (TTCCC)n Simple_repeat Simple_repeat 3 65 0 2 955 221 175 0 24 chr17 48602139 48602158 -46670493 + polypyrimidine Low_complexity Low_complexity 2 20 0 2 955 1122 56 7 0 chr17 48602160 48602304 -46670347 - B1_Mus2 SINE Alu 0 147 3 2 955 497 16 16 0 chr17 48602443 48602505 -46670146 + (TAG)n Simple_repeat Simple_repeat 3 65 0 2 955 21 0 0 0 chr17 48602505 48602526 -46670125 + AT_rich Low_complexity Low_complexity 1 21 0 2 955 446 314 50 12 chr17 48604032 48604193 -46668458 - B4A SINE B4 -124 168 2 2 955 186 71 0 0 chr17 48605769 48605797 -46666854 + (C)n Simple_repeat Simple_repeat 1 28 0 2 955 425 200 95 9 chr17 48606109 48606225 -46666426 - RMER30 DNA MER1_type -38 164 39 2 955 1006 215 25 9 chr17 48606227 48606459 -46666192 - MTD LTR MaLR -14 405 184 2 955 518 236 90 22 chr17 48608131 48608309 -46664342 - B3A SINE B2 -8 190 1 2 955 1317 290 29 91 chr17 48608746 48609307 -46663344 - MT2A LTR ERVL -7 526 1 2 955 254 282 39 0 chr17 48609639 48609717 -46662934 - Charlie5 DNA MER1_type -2 2622 2542 2 955 585 246 59 15 chr17 48609717 48609853 -46662798 + RSINE1 SINE B4 3 144 -21 2 955 373 204 35 61 chr17 48609900 48609914 -46662737 - Charlie5 DNA MER1_type -75 2549 2538 2 955 1576 32 0 0 chr17 48609914 48610104 -46662547 + B2_Mm1a SINE B2 1 190 -3 2 955 373 204 35 61 chr17 48610104 48610204 -46662447 - Charlie5 DNA MER1_type -87 2537 2438 2 955 303 96 0 0 chr17 48610251 48610303 -46662348 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 955 492 229 42 8 chr17 48610321 48610440 -46662211 - RSINE1 SINE B4 -40 125 3 2 955 293 320 93 26 chr17 48610471 48610622 -46662029 - RSINE1 SINE B4 -2 163 3 2 955 377 330 66 117 chr17 48610708 48611088 -46661563 + ORR1E LTR MaLR 1 361 -9 2 955 275 213 13 13 chr17 48611091 48611167 -46661484 - Charlie5 DNA MER1_type -261 2363 2288 2 955 1005 94 0 14 chr17 48611197 48611337 -46661314 - B1_Mus1 SINE Alu -9 139 2 2 955 321 276 57 57 chr17 48611391 48611514 -46661137 - Charlie5 DNA MER1_type -2501 123 1 2 955 817 168 31 29 chr17 48611637 48612099 -46660552 + (TCCA)n Simple_repeat Simple_repeat 1 462 0 2 955 907 250 48 64 chr17 48612320 48612615 -46660036 + B4 SINE B4 1 290 -2 2 955 718 204 14 82 chr17 48612815 48613023 -46659628 + B3A SINE B2 3 196 -2 2 955 431 300 30 0 chr17 48613111 48613211 -46659440 - PB1D7 SINE Alu -5 115 13 2 955 318 323 0 57 chr17 48613132 48613237 -46659414 - ID_B1 SINE B4 -55 169 71 2 955 2375 139 86 2 chr17 48613326 48613745 -46658906 - RMER17B LTR ERVK -129 829 376 2 955 444 76 61 0 chr17 48613742 48613808 -46658843 - RMER17B LTR ERVK -740 218 149 2 955 443 37 0 0 chr17 48613808 48613862 -46658789 - L1_Mm LINE L1 -257 5626 5573 2 955 719 174 30 30 chr17 48613862 48614010 -46658641 - RMER17B LTR ERVK -768 140 1 2 955 578 291 40 23 chr17 48614010 48614180 -46658471 - B3 SINE B2 -38 178 6 2 955 346 119 35 23 chr17 48614217 48614303 -46658348 + (TA)n Simple_repeat Simple_repeat 1 87 0 2 955 544 226 26 0 chr17 48614736 48614851 -46657800 + PB1D9 SINE Alu 3 120 0 2 955 304 371 57 35 chr17 48615153 48615382 -46657269 + ORR1E LTR MaLR 80 313 -46 2 955 821 238 6 11 chr17 48615527 48615710 -46656941 + B3A SINE B2 1 182 -16 2 955 692 215 70 0 chr17 48616000 48616158 -46656493 - MTE2b LTR MaLR -10 369 201 2 955 183 129 0 0 chr17 48616170 48616201 -46656450 + (AGGGGG)n Simple_repeat Simple_repeat 4 34 0 2 955 285 379 36 0 chr17 48617441 48617581 -46655070 - MLT1F LTR MaLR -185 363 219 2 955 361 268 70 7 chr17 48617741 48617884 -46654767 - L1MA8 LINE L1 -54 6237 6086 2 955 928 269 10 0 chr17 48617969 48618177 -46654474 + B3 SINE B2 2 211 -5 2 955 25 0 0 0 chr17 48618303 48618328 -46654323 + AT_rich Low_complexity Low_complexity 1 25 0 2 955 465 19 0 0 chr17 48618341 48618395 -46654256 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 2 955 906 224 17 84 chr17 48618404 48618643 -46654008 - B4 SINE B4 -69 223 1 2 955 282 301 0 0 chr17 48618664 48618737 -46653914 - MIRc SINE MIR -75 193 121 2 955 327 49 0 0 chr17 48618833 48618874 -46653777 + (CCTG)n Simple_repeat Simple_repeat 1 41 0 2 955 1451 25 4 0 chr17 48618875 48619115 -46653536 + (TTCC)n Simple_repeat Simple_repeat 1 241 0 2 955 524 77 13 0 chr17 48619115 48619193 -46653458 + (TCCC)n Simple_repeat Simple_repeat 3 81 0 2 955 872 144 36 7 chr17 48619202 48619342 -46653309 - B1_Mus1 SINE Alu -1 147 4 2 955 183 367 0 0 chr17 48619425 48619485 -46653166 + MIRb SINE MIR 188 247 -21 2 955 227 189 19 0 chr17 48620049 48620102 -46652549 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 955 1019 291 11 43 chr17 48620134 48620414 -46652237 - B4A SINE B4 -20 272 2 2 955 1053 211 18 32 chr17 48620891 48620993 -46651658 + ID_B1 SINE B4 5 107 -117 2 955 2075 98 38 79 chr17 48620993 48621336 -46651315 - ORR1A4 LTR MaLR 0 329 1 2 955 1053 211 18 32 chr17 48621336 48621453 -46651198 + ID_B1 SINE B4 108 221 -3 2 955 223 288 14 0 chr17 48621499 48621572 -46651079 + GA-rich Low_complexity Low_complexity 1 74 0 2 955 292 183 69 63 chr17 48621687 48621805 -46650846 + ORR1D2 LTR MaLR 20 140 -234 2 955 947 239 180 0 chr17 48621842 48622081 -46650570 + MTEa LTR MaLR 1 282 -97 2 955 653 253 216 9 chr17 48622180 48622484 -46650167 - MTD LTR MaLR -41 380 1 2 955 292 282 151 16 chr17 48623430 48623556 -46649095 - Tigger5 DNA MER2_type -848 1558 1416 2 955 666 244 74 17 chr17 48623580 48623629 -46649022 + ID_B1 SINE B4 27 211 -13 2 955 299 266 21 127 chr17 48623629 48623755 -46648896 + PB1 SINE Alu 1 115 -12 2 955 338 0 24 0 chr17 48623755 48623797 -46648854 + (CCAA)n Simple_repeat Simple_repeat 1 43 0 2 955 299 266 21 127 chr17 48623797 48623812 -46648839 + PB1 SINE Alu 116 127 0 2 955 602 277 30 12 chr17 48623827 48623995 -46648656 + B4A SINE B4 82 252 -40 2 955 1592 285 109 9 chr17 48624166 48624698 -46647953 - Tigger5 DNA MER2_type -1210 1196 612 2 955 180 0 0 0 chr17 48624727 48624747 -46647904 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 955 616 151 19 19 chr17 48624750 48624858 -46647793 - B1_Mm SINE Alu 0 147 40 2 955 266 236 0 110 chr17 48624776 48624876 -46647775 - RLTR25B LTR ERVK -513 515 427 2 955 354 233 0 0 chr17 48624877 48625010 -46647641 + CT-rich Low_complexity Low_complexity 1 133 0 2 955 307 218 0 0 chr17 48625014 48625069 -46647582 - B1_Mur4 SINE Alu -95 55 1 2 955 231 146 0 0 chr17 48625069 48625110 -46647541 + (T)n Simple_repeat Simple_repeat 1 41 0 2 955 225 0 0 0 chr17 48625231 48625256 -46647395 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2 955 2050 182 73 7 chr17 48625261 48625687 -46646964 - Lx5 LINE L1 -2 7048 6595 2 955 694 317 284 9 chr17 48625719 48626142 -46646509 - Tigger5 DNA MER2_type -1853 553 15 2 955 368 281 66 12 chr17 48626272 48626438 -46646213 - L1MC4a LINE L1 0 7882 7708 2 955 657 267 89 53 chr17 48626535 48626725 -46645926 + B3A SINE B2 2 198 0 3 955 198 0 0 0 chr17 48626725 48626747 -46645904 + (CCAA)n Simple_repeat Simple_repeat 2 23 0 3 955 733 253 16 27 chr17 48626993 48627176 -46645475 - B3A SINE B2 -17 181 1 3 955 704 269 51 23 chr17 48627243 48627460 -46645191 + MER2 DNA MER2_type 117 339 -6 3 119 313 226 291 21 chr17 48627701 48627849 -46644802 + B3A SINE B2 1 188 -10 3 956 1730 176 99 14 chr17 48628426 48628617 -46644034 - RMER10B LTR ERVL 0 398 191 3 956 1284 89 0 0 chr17 48628617 48628797 -46643854 + (GGA)n Simple_repeat Simple_repeat 1 180 0 3 956 1730 176 99 14 chr17 48628797 48628968 -46643683 - RMER10B LTR ERVL -208 190 5 3 956 638 205 356 57 chr17 48628968 48629192 -46643459 + MTEb LTR MaLR 21 311 -108 3 956 187 314 14 14 chr17 48629424 48629495 -46643156 + MIRc SINE MIR 130 200 -68 3 956 279 0 0 0 chr17 48629602 48629633 -46643018 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 956 3578 33 33 5 chr17 48629635 48630059 -46642592 - RLTR10C LTR ERVK 0 436 1 3 956 243 255 135 45 chr17 48630225 48630336 -46642315 - MIRb SINE MIR -122 146 26 3 956 932 230 186 8 chr17 48630569 48630924 -46641727 + MTD LTR MaLR 1 418 -1 3 956 503 213 75 133 chr17 48631043 48631152 -46641499 - RSINE1 SINE B4 0 165 74 3 956 1786 173 46 35 chr17 48631152 48631523 -46641128 + ORR1C1 LTR MaLR 4 378 0 3 956 503 213 75 133 chr17 48631523 48631586 -46641065 - RSINE1 SINE B4 -92 73 3 3 956 355 247 191 19 chr17 48631605 48631762 -46640889 - L1MC LINE L1 -2067 5815 5632 3 956 189 0 0 0 chr17 48632426 48632447 -46640204 + (C)n Simple_repeat Simple_repeat 1 21 0 3 956 1036 189 30 42 chr17 48632486 48632817 -46639834 - RMER17C LTR ERVK 0 410 84 3 956 314 157 0 46 chr17 48632817 48632904 -46639747 + GA-rich Low_complexity Low_complexity 3 85 0 3 956 345 47 0 0 chr17 48633218 48633261 -46639390 + (AGGGGG)n Simple_repeat Simple_repeat 6 48 0 3 956 268 245 116 58 chr17 48633533 48633694 -46638957 - L1MC4a LINE L1 -948 6934 6767 3 956 279 0 0 0 chr17 48633694 48633725 -46638926 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 956 268 245 116 58 chr17 48633725 48633736 -46638915 - L1MC4a LINE L1 -1116 6766 6753 3 956 280 227 0 30 chr17 48633763 48633863 -46638788 + CT-rich Low_complexity Low_complexity 1 97 0 3 956 223 152 0 0 chr17 48633876 48633909 -46638742 + polypyrimidine Low_complexity Low_complexity 3 35 0 3 956 1457 192 77 21 chr17 48633999 48634170 -46638481 + RMER17C LTR ERVK 1 179 -231 3 956 618 20 39 20 chr17 48634170 48634272 -46638379 + (TTCTC)n Simple_repeat Simple_repeat 1 104 0 3 956 1457 192 77 21 chr17 48634272 48634488 -46638163 + RMER17C LTR ERVK 180 410 0 3 956 1021 229 154 51 chr17 48634592 48635213 -46637438 + RMER17C-int LTR ERVK 81 765 -2473 3 956 10937 140 53 77 chr17 48635258 48635644 -46637007 + RMER17C-int LTR ERVK 1003 1400 -1838 3 956 243 0 0 0 chr17 48635644 48635671 -46636980 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 3 956 10937 140 53 77 chr17 48635671 48637573 -46635078 + RMER17C-int LTR ERVK 1401 3238 0 3 956 847 249 26 36 chr17 48637573 48638026 -46634625 + RMER17C LTR ERVK 1 400 -10 3 956 405 0 0 0 chr17 48638026 48638071 -46634580 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 956 620 307 133 4 chr17 48638127 48638382 -46634269 + B4A SINE B4 3 290 -2 3 956 326 325 0 11 chr17 48638910 48638997 -46633654 - L1MC4a LINE L1 -1816 6066 5981 3 956 570 285 219 55 chr17 48639335 48639791 -46632860 - MT2A LTR ERVL 0 533 3 3 956 815 220 151 0 chr17 48639938 48640124 -46632527 + B3 SINE B2 2 215 -1 3 956 222 384 40 73 chr17 48640242 48640543 -46632108 + L3 LINE CR1 2856 3146 -1343 3 956 301 236 106 62 chr17 48640790 48640903 -46631748 - LTR16E1 LTR ERVL 0 538 421 3 956 1032 117 29 14 chr17 48640903 48641068 -46631583 - ORR1A3 LTR MaLR 0 379 181 3 956 401 107 26 39 chr17 48641076 48641154 -46631497 - ORR1A3 LTR MaLR -282 77 1 3 956 300 385 30 30 chr17 48641494 48641660 -46630991 - MLT1I LTR MaLR -144 267 102 3 956 233 254 0 0 chr17 48641661 48641724 -46630927 + (CTGGGG)n Simple_repeat Simple_repeat 4 66 0 3 956 372 43 0 0 chr17 48641876 48641922 -46630729 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 956 797 163 70 0 chr17 48642214 48642343 -46630308 + B1_Mur3 SINE Alu 1 138 -11 3 956 213 65 0 0 chr17 48642343 48642374 -46630277 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 956 2567 157 12 5 chr17 48642654 48643071 -46629580 - MTC LTR MaLR -1 420 1 3 956 186 167 0 0 chr17 48643392 48643428 -46629223 + CT-rich Low_complexity Low_complexity 1 36 0 3 956 196 194 21 11 chr17 48643443 48643537 -46629114 + (TCTG)n Simple_repeat Simple_repeat 4 98 0 3 956 432 210 0 0 chr17 48643550 48643717 -46628934 + (TCTG)n Simple_repeat Simple_repeat 4 170 0 3 956 599 245 97 48 chr17 48643766 48643972 -46628679 - ID_B1 SINE B4 -8 216 1 3 956 196 304 18 0 chr17 48645069 48645142 -46627509 - L2b LINE L2 -85 3302 3227 3 956 559 200 0 0 chr17 48645403 48645508 -46627143 + RSINE1 SINE B4 17 121 -44 3 956 274 340 95 52 chr17 48645809 48646048 -46626603 - MIRm SINE MIR -24 252 4 3 956 361 261 45 0 chr17 48646588 48646699 -46625952 + GA-rich Low_complexity Low_complexity 6 121 0 3 956 280 247 0 0 chr17 48646799 48646876 -46625775 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 956 364 137 42 0 chr17 48646881 48646976 -46625675 + (CAGA)n Simple_repeat Simple_repeat 4 102 0 3 956 583 294 18 26 chr17 48647054 48647311 -46625340 - L1MA4 LINE L1 -373 5927 5698 3 956 797 341 72 0 chr17 48647671 48647964 -46624687 - MTEa LTR MaLR -48 331 18 3 956 560 296 17 17 chr17 48649028 48649200 -46623451 + ORR1E LTR MaLR 75 246 -113 3 956 992 96 30 0 chr17 48649361 48649528 -46623123 + (TTCC)n Simple_repeat Simple_repeat 2 173 0 3 956 1153 94 0 22 chr17 48649548 48649732 -46622919 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 956 450 119 15 0 chr17 48649739 48649806 -46622845 - ID_B1 SINE B4 -21 203 136 3 956 355 218 248 0 chr17 48649806 48649840 -46622811 - B1F SINE Alu -21 128 3 3 956 242 232 0 18 chr17 48650056 48650113 -46622538 + MER5B DNA MER1_type 114 169 -9 3 956 188 298 109 44 chr17 48650178 48650315 -46622336 + L2c LINE L2 2932 3077 -310 3 956 654 333 52 52 chr17 48650600 48650626 -46622025 - B4A SINE B4 0 292 267 3 956 2163 141 64 58 chr17 48650626 48651002 -46621649 - ORR1C1 LTR MaLR 0 378 1 3 956 654 333 52 52 chr17 48651002 48651266 -46621385 - B4A SINE B4 -26 266 2 3 956 201 226 0 0 chr17 48651483 48651536 -46621115 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 956 516 306 45 0 chr17 48651536 48651693 -46620958 - RSINE1 SINE B4 0 165 2 3 956 388 294 80 76 chr17 48651705 48651955 -46620696 - MER33 DNA MER1_type -65 259 9 3 956 410 263 76 21 chr17 48652343 48652507 -46620144 - MTEa LTR MaLR -76 303 136 3 956 500 302 16 0 chr17 48652768 48652897 -46619754 - B3A SINE B2 -67 131 1 3 956 491 324 87 37 chr17 48652897 48653104 -46619547 - B4A SINE B4 -71 221 4 3 956 246 321 12 0 chr17 48653862 48653946 -46618705 + CT-rich Low_complexity Low_complexity 4 88 0 3 956 390 74 0 0 chr17 48653975 48654029 -46618622 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 956 201 185 15 30 chr17 48654056 48654123 -46618528 + CT-rich Low_complexity Low_complexity 2 67 0 3 956 554 286 8 0 chr17 48654165 48654291 -46618360 - ID_B1 SINE B4 -93 131 5 3 956 330 290 143 14 chr17 48654322 48654469 -46618182 + MIR SINE MIR 28 193 -69 3 956 216 0 0 0 chr17 48654989 48655013 -46617638 + (CAACC)n Simple_repeat Simple_repeat 2 25 0 3 956 741 163 0 17 chr17 48655013 48655194 -46617457 + (CCAA)n Simple_repeat Simple_repeat 1 178 0 3 956 255 103 0 0 chr17 48655200 48655239 -46617412 + (CAGC)n Simple_repeat Simple_repeat 4 42 0 3 956 239 227 57 57 chr17 48655405 48655475 -46617176 + tRNA-Ala-GCY_ tRNA tRNA 3 72 -3 3 956 1363 72 27 16 chr17 48655537 48655721 -46616930 - B2_Mm2 SINE B2 -9 186 1 3 956 498 300 37 108 chr17 48655855 48656150 -46616501 + B4 SINE B4 2 275 -17 3 956 344 59 20 0 chr17 48656156 48656207 -46616444 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 956 576 179 57 0 chr17 48656313 48656419 -46616232 - B3A SINE B2 -86 112 1 3 956 1109 89 0 7 chr17 48656991 48657138 -46615513 - B1_Mus1 SINE Alu 0 148 3 3 956 278 331 6 168 chr17 48657779 48657946 -46614705 + B4 SINE B4 2 141 -151 3 956 245 288 47 120 chr17 48658287 48658437 -46614214 + MER53 DNA hAT 53 191 -2 3 956 1019 240 33 88 chr17 48658577 48658703 -46613948 + B4A SINE B4 4 134 -158 3 956 191 88 29 0 chr17 48658703 48658737 -46613914 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 3 956 1019 240 33 88 chr17 48658737 48658916 -46613735 + B4A SINE B4 135 292 0 3 956 1415 250 3 42 chr17 48659010 48659340 -46613311 - MTEb LTR MaLR -54 325 9 3 956 432 0 0 0 chr17 48659676 48659724 -46612927 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 956 466 290 6 37 chr17 48659895 48660056 -46612595 - CR1_Mam LINE CR1 -1272 932 777 3 956 183 156 0 0 chr17 48660411 48660443 -46612208 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 3 956 360 272 55 31 chr17 48660476 48660610 -46612041 + MLT1A1 LTR MaLR 229 382 -26 3 956 1251 56 6 22 chr17 48660844 48661027 -46611624 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 3 956 222 118 0 0 chr17 48661074 48661108 -46611543 + (CCTG)n Simple_repeat Simple_repeat 2 35 0 3 956 345 265 60 0 chr17 48661335 48661418 -46611233 - B4A SINE B4 -199 93 6 3 956 706 274 79 33 chr17 48661397 48661454 -46611197 - B4 SINE B4 -47 245 187 3 956 276 0 22 43 chr17 48661454 48661500 -46611151 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 3 956 706 275 53 5 chr17 48661500 48661657 -46610994 - B4 SINE B4 -104 188 22 3 956 1443 207 100 35 chr17 48661658 48662036 -46610615 + RMER16 LTR ERVK 1 533 0 3 956 419 225 0 0 chr17 48662041 48662112 -46610539 - PB1D10 SINE Alu -44 73 3 3 956 205 356 47 35 chr17 48662393 48662562 -46610089 - MIRc SINE MIR -9 259 89 3 956 190 136 0 43 chr17 48662627 48662673 -46609978 + GA-rich Low_complexity Low_complexity 3 46 0 3 956 343 155 113 0 chr17 48662685 48662756 -46609895 + ORR1A2 LTR MaLR 1 79 -248 3 956 2383 78 35 7 chr17 48662758 48663120 -46609531 - RLTR1B LTR ERV1 0 512 74 3 956 362 241 9 0 chr17 48663263 48663371 -46609280 + CT-rich Low_complexity Low_complexity 3 111 0 4 956 486 282 75 45 chr17 48663426 48663726 -46608925 - L1MA4 LINE L1 -364 5936 5600 4 956 252 364 47 40 chr17 48664259 48664408 -46608243 + L3 LINE CR1 4228 4377 -112 4 956 330 26 0 0 chr17 48664926 48664965 -46607686 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 956 952 164 205 0 chr17 48664981 48665152 -46607499 + B3 SINE B2 2 207 -9 4 956 585 239 98 0 chr17 48665261 48665424 -46607227 + B3A SINE B2 2 180 -18 4 956 213 184 19 58 chr17 48666017 48666069 -46606582 - MIRb SINE MIR -12 256 207 4 956 246 338 0 0 chr17 48666110 48666184 -46606467 + (TG)n Simple_repeat Simple_repeat 1 74 0 4 956 897 274 37 19 chr17 48666198 48666445 -46606206 - B4 SINE B4 -4 288 60 4 956 313 75 38 0 chr17 48666707 48666760 -46605891 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 956 227 277 117 70 chr17 48667344 48667472 -46605179 - RMER21B LTR ERV1 -2 840 707 4 956 678 171 11 6 chr17 48667509 48667686 -46604965 + (TG)n Simple_repeat Simple_repeat 1 178 0 4 956 183 42 0 0 chr17 48667704 48667728 -46604923 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 956 3219 44 29 0 chr17 48667963 48668348 -46604303 - MTA_Mm LTR MaLR 0 396 1 4 956 184 59 0 56 chr17 48668397 48668433 -46604218 + (CCCCCT)n Simple_repeat Simple_repeat 5 38 0 4 956 384 313 9 0 chr17 48668563 48668678 -46603973 - Lx8 LINE L1 -197 7276 7161 4 956 1224 180 5 12 chr17 48668858 48669082 -46603569 + MTD LTR MaLR 1 208 -211 4 956 7519 126 33 3 chr17 48669082 48670894 -46601757 + L1_Mus2 LINE L1 527 2394 -3489 4 956 3316 81 14 58 chr17 48670907 48671458 -46601193 + MusHAL1 LINE L1 1905 2431 -281 4 956 7215 71 12 17 chr17 48671465 48672971 -46599680 + L1_Mus2 LINE L1 5066 6566 0 4 956 301 140 0 0 chr17 48673001 48673051 -46599600 + MTD LTR MaLR 204 253 -168 4 956 198 0 0 0 chr17 48673633 48673655 -46598996 + (C)n Simple_repeat Simple_repeat 1 22 0 4 956 191 368 31 23 chr17 48673919 48674047 -46598604 + MIRb SINE MIR 34 162 -106 4 956 275 269 51 0 chr17 48674221 48674299 -46598352 + ID_B1 SINE B4 91 172 -52 4 956 2031 48 108 0 chr17 48674317 48674585 -46598066 - ORR1A2 LTR MaLR -8 319 23 4 956 248 243 51 51 chr17 48674549 48674627 -46598024 + B1F2 SINE Alu 72 149 0 4 956 500 229 0 0 chr17 48674655 48674751 -46597900 + ID_B1 SINE B4 123 218 -6 4 956 240 35 0 0 chr17 48674805 48674834 -46597817 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 4 956 297 0 0 0 chr17 48674871 48674904 -46597747 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 956 486 0 0 0 chr17 48675305 48675359 -46597292 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 956 473 32 0 16 chr17 48675915 48675979 -46596672 + (TG)n Simple_repeat Simple_repeat 1 63 0 4 956 911 288 24 28 chr17 48676000 48676250 -46596401 - B4A SINE B4 -19 273 25 4 956 941 225 90 86 chr17 48676267 48676760 -46595891 + RLTR11B LTR ERVK 1 480 -48 4 956 209 214 0 0 chr17 48676876 48676918 -46595733 - L2b LINE L2 0 3375 3334 4 956 324 0 0 0 chr17 48676984 48677020 -46595631 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 956 270 271 35 12 chr17 48677676 48677762 -46594889 - RSINE1 SINE B4 0 165 78 4 956 552 290 126 0 chr17 48677785 48677968 -46594683 - B3 SINE B2 -10 206 1 4 956 602 292 99 149 chr17 48678315 48678710 -46593941 - MTEb LTR MaLR 0 379 5 4 956 495 60 0 0 chr17 48679373 48679440 -46593211 + (TCCA)n Simple_repeat Simple_repeat 3 69 0 4 956 315 244 0 0 chr17 48679465 48679596 -46593055 + (TCTA)n Simple_repeat Simple_repeat 4 134 0 4 956 571 192 0 11 chr17 48679610 48679789 -46592862 + (TCTA)n Simple_repeat Simple_repeat 4 180 0 4 956 242 218 9 26 chr17 48679815 48679928 -46592723 + (TCCA)n Simple_repeat Simple_repeat 3 113 0 4 956 216 191 43 0 chr17 48679940 48679987 -46592664 + (CATATA)n Simple_repeat Simple_repeat 3 51 0 4 956 265 329 34 74 chr17 48681186 48681208 -46591443 + MIRm SINE MIR 2 21 -255 4 956 988 135 11 11 chr17 48681208 48681388 -46591263 + GA-rich Low_complexity Low_complexity 1 180 0 4 956 343 266 40 86 chr17 48681388 48681452 -46591199 + MIR3 SINE MIR 19 85 -191 4 956 799 262 223 0 chr17 48681452 48681761 -46590890 - MTE2b LTR MaLR -1 378 1 4 956 343 265 40 86 chr17 48681761 48681895 -46590756 + MIR3 SINE MIR 80 207 -1 4 956 315 0 0 0 chr17 48682483 48682518 -46590133 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 956 402 39 0 0 chr17 48682518 48682569 -46590082 + (GA)n Simple_repeat Simple_repeat 1 52 0 4 956 330 26 0 0 chr17 48683206 48683245 -46589406 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 956 305 260 0 94 chr17 48683271 48683356 -46589295 - B4A SINE B4 -4 288 212 4 956 413 198 2 105 chr17 48683330 48683450 -46589201 - B3A SINE B2 0 216 101 4 956 992 124 0 36 chr17 48683473 48683640 -46589011 + URR1B DNA MER1_type 65 225 0 4 956 336 283 21 42 chr17 48683646 48683742 -46588909 - B3A SINE B2 -103 95 2 4 956 716 309 9 52 chr17 48683753 48683985 -46588666 - B4A SINE B4 -61 231 10 4 956 203 251 2 35 chr17 48684007 48684092 -46588559 - MIRc SINE MIR -100 162 83 4 956 480 289 457 4 chr17 48685353 48685587 -46587064 - MTEb LTR MaLR -40 339 1 4 956 251 135 0 0 chr17 48685657 48685694 -46586957 - MIRm SINE MIR -125 151 115 4 956 377 256 36 58 chr17 48686398 48686535 -46586116 + MER90a LTR ERV1 4 177 -437 4 956 738 286 80 53 chr17 48686910 48687172 -46585479 - B4A SINE B4 0 292 24 4 956 210 289 75 43 chr17 48687410 48687504 -46585147 - MIRb SINE MIR -67 201 105 4 956 1074 279 15 8 chr17 48687864 48688131 -46584520 + MTEa LTR MaLR 111 379 0 4 956 2215 93 42 60 chr17 48688552 48688884 -46583767 + ORR1A3 LTR MaLR 1 326 0 4 956 249 262 99 72 chr17 48688925 48689036 -46583615 - LTRIS4 LTR ERV1 -50 457 344 4 956 261 0 0 0 chr17 48689311 48689340 -46583311 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4 956 268 228 125 12 chr17 48689671 48689751 -46582900 - RMER15 LTR ERVL -65 510 422 4 956 273 248 209 8 chr17 48689811 48689945 -46582706 - RMER15 LTR ERVL -354 221 61 4 956 398 276 41 0 chr17 48689989 48690087 -46582564 - RSINE1 SINE B4 -36 129 28 4 956 181 98 49 0 chr17 48690089 48690130 -46582521 + (TTTG)n Simple_repeat Simple_repeat 1 43 0 4 956 780 165 71 14 chr17 48690130 48690271 -46582380 - B1_Mur4 SINE Alu -1 149 1 4 956 275 284 69 46 chr17 48690480 48690556 -46582095 - Lx9 LINE L1 -63 7581 7505 4 956 789 223 95 15 chr17 48690556 48690756 -46581895 - B3 SINE B2 0 216 1 4 956 275 284 69 46 chr17 48690756 48690797 -46581854 - Lx9 LINE L1 -140 7504 7458 4 956 408 40 0 0 chr17 48690797 48690847 -46581804 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 956 275 284 69 46 chr17 48690847 48690946 -46581705 - Lx9 LINE L1 -187 7457 7359 4 956 341 340 35 28 chr17 48691078 48691444 -46581207 - L1M5 LINE L1 -2373 3773 3403 4 956 3524 177 146 78 chr17 48691792 48692637 -46580014 - RMER19B LTR ERVK 0 902 1 4 956 21 0 0 0 chr17 48692687 48692708 -46579943 + AT_rich Low_complexity Low_complexity 1 21 0 4 956 256 177 50 12 chr17 48692943 48693023 -46579628 + (TTTA)n Simple_repeat Simple_repeat 4 86 0 4 956 575 130 0 10 chr17 48693039 48693140 -46579511 + (GA)n Simple_repeat Simple_repeat 1 100 0 4 956 655 287 13 6 chr17 48693141 48693299 -46579352 - B3A SINE B2 -28 170 12 4 956 587 286 113 82 chr17 48693352 48693634 -46579017 - B4 SINE B4 0 292 2 4 956 622 147 29 6 chr17 48693688 48693859 -46578792 + (TCTA)n Simple_repeat Simple_repeat 4 178 0 4 956 342 0 0 0 chr17 48693859 48693897 -46578754 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 956 438 295 74 80 chr17 48694483 48694831 -46577820 - ORR1E LTR MaLR -2 377 6 4 956 200 238 30 60 chr17 48695463 48695530 -46577121 + L3 LINE CR1 2115 2179 -2310 4 956 195 367 73 45 chr17 48696451 48696671 -46575980 + L2 LINE L2 2482 2707 -712 4 956 330 26 0 0 chr17 48696772 48696811 -46575840 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 956 261 0 0 0 chr17 48696811 48696839 -46575812 + (GA)n Simple_repeat Simple_repeat 1 29 0 4 956 249 320 39 54 chr17 48697126 48697255 -46575396 + L2 LINE L2 2872 2998 -421 4 956 1235 275 77 26 chr17 48697714 48698065 -46574586 - MTD LTR MaLR -46 373 5 4 956 520 216 25 33 chr17 48698070 48698190 -46574461 + MTEa LTR MaLR 261 379 0 4 956 396 0 0 0 chr17 48698301 48698345 -46574306 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 956 754 222 46 41 chr17 48698595 48698792 -46573859 + B3A SINE B2 1 198 0 4 956 866 272 51 82 chr17 48699191 48699620 -46573031 + MTD LTR MaLR 4 419 0 4 956 537 303 110 0 chr17 48699832 48699977 -46572674 + ID_B1 SINE B4 6 166 -58 4 956 519 56 0 0 chr17 48700006 48700077 -46572574 + (TG)n Simple_repeat Simple_repeat 1 71 0 4 956 273 356 19 0 chr17 48700389 48700493 -46572158 - MIRc SINE MIR -32 236 131 4 956 235 350 25 0 chr17 48700538 48700618 -46572033 - MIRb SINE MIR -52 216 135 4 956 1241 184 13 35 chr17 48700938 48701169 -46571482 + RLTR11A LTR ERVK 2 227 -301 4 956 396 191 0 0 chr17 48701579 48701663 -46570988 + GA-rich Low_complexity Low_complexity 3 86 0 4 956 204 246 0 92 chr17 48701721 48701797 -46570854 + L3 LINE CR1 2410 2478 -2011 4 956 338 267 189 46 chr17 48701893 48702041 -46570610 + RMER15 LTR ERVL 302 471 -104 4 956 2723 154 54 36 chr17 48702041 48702074 -46570577 + RMER20A LTR ERVK 3 35 -481 4 956 1500 27 26 32 chr17 48702074 48702263 -46570388 + B2_Mm2 SINE B2 2 189 -6 4 956 2723 154 54 36 chr17 48702263 48702733 -46569918 + RMER20A LTR ERVK 36 515 -1 4 956 308 334 116 72 chr17 48703083 48703402 -46569249 + MLT1F LTR MaLR 26 358 -190 4 956 248 295 151 9 chr17 48703521 48703627 -46569024 - MER112 DNA MER1_type -122 139 19 4 956 364 298 163 0 chr17 48704385 48704526 -46568125 - MER112 DNA MER1_type -94 167 4 4 956 337 324 72 0 chr17 48705576 48705687 -46566964 + MLT1C LTR MaLR 2 120 -347 4 956 349 294 0 40 chr17 48706370 48706494 -46566157 + MLT1C LTR MaLR 129 247 -143 4 956 1954 143 72 44 chr17 48706494 48706881 -46565770 + RMER10B LTR ERVL 1 398 0 4 956 358 354 31 6 chr17 48706883 48707042 -46565609 + MLT1C LTR MaLR 305 467 0 4 956 827 271 65 89 chr17 48707379 48707715 -46564936 - ORR1E LTR MaLR -18 341 14 4 956 376 321 77 41 chr17 48707733 48707954 -46564697 + Arthur1B DNA Tip100 364 592 -633 5 956 380 287 21 29 chr17 48708050 48708190 -46564461 + Arthur1B DNA Tip100 1087 1225 0 5 956 201 302 10 30 chr17 48708195 48708294 -46564357 + GA-rich Low_complexity Low_complexity 1 97 0 5 956 919 248 224 3 chr17 48708300 48708595 -46564056 - ORR1D2 LTR MaLR -2 368 9 5 956 210 354 69 30 chr17 48708714 48708845 -46563806 + L2a LINE L2 3283 3418 -8 5 956 409 277 202 0 chr17 48709125 48709244 -46563407 + RSINE1 SINE B4 3 145 -20 5 956 315 0 0 0 chr17 48709252 48709287 -46563364 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 956 3989 142 25 15 chr17 48709629 48710281 -46562370 - Lx LINE L1 -2 6652 5995 5 956 288 111 0 0 chr17 48710378 48710423 -46562228 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 956 612 310 0 47 chr17 48710430 48710579 -46562072 - RSINE1 SINE B4 -22 143 2 5 956 2385 184 46 99 chr17 48710684 48711208 -46561443 + RLTR18B LTR ERVK 1 496 -16 5 956 232 247 92 23 chr17 48711329 48711416 -46561235 + MIR3 SINE MIR 93 185 -23 5 956 374 127 14 0 chr17 48711416 48711487 -46561164 + (TG)n Simple_repeat Simple_repeat 1 72 0 5 956 1719 206 78 23 chr17 48711511 48711898 -46560753 + MTD LTR MaLR 12 419 0 5 956 870 262 115 19 chr17 48711915 48712176 -46560475 - B4 SINE B4 -6 286 1 5 956 738 142 0 1 chr17 48713269 48713396 -46559255 - Lx6 LINE L1 -1766 5694 5571 5 956 6765 82 3 3 chr17 48713339 48714295 -46558356 + L1_Mus2 LINE L1 5635 6566 0 5 956 517 177 189 24 chr17 48715969 48716096 -46556555 + B3A SINE B2 1 148 -50 5 956 459 82 0 0 chr17 48716103 48716176 -46556475 + (CA)n Simple_repeat Simple_repeat 1 73 0 5 956 1057 205 14 0 chr17 48716374 48716584 -46556067 - MTEa LTR MaLR 0 379 167 5 956 587 299 18 94 chr17 48716861 48717031 -46555620 - RSINE1 SINE B4 0 165 9 5 956 213 232 0 0 chr17 48717080 48717149 -46555502 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 956 387 274 20 129 chr17 48717158 48717305 -46555346 + MTE2a LTR MaLR 9 139 -240 5 956 1574 162 25 96 chr17 48717325 48717679 -46554972 - ORR1A4 LTR MaLR 0 329 1 5 956 2094 137 39 39 chr17 48719470 48719828 -46552823 + RLTR15 LTR ERVK 2 359 0 5 956 464 204 43 0 chr17 48720351 48720444 -46552207 - RSINE1 SINE B4 -56 109 13 5 956 298 342 85 8 chr17 48720746 48720864 -46551787 - MIRb SINE MIR -92 176 50 5 956 228 232 14 14 chr17 48720898 48720968 -46551683 + (CA)n Simple_repeat Simple_repeat 2 71 0 5 956 276 298 19 0 chr17 48721533 48721637 -46551014 + L1M5 LINE L1 5761 5866 -258 5 956 366 353 13 25 chr17 48722194 48722351 -46550300 + CT-rich Low_complexity Low_complexity 2 156 0 5 956 240 189 36 7 chr17 48724320 48724459 -46548192 + (TCTA)n Simple_repeat Simple_repeat 2 144 0 5 956 233 57 29 0 chr17 48724461 48724496 -46548155 + (TTA)n Simple_repeat Simple_repeat 3 38 0 5 956 405 273 130 83 chr17 48724712 48724904 -46547747 - B3A SINE B2 -3 213 13 5 956 253 324 75 72 chr17 48725353 48725726 -46546925 - RMER10A LTR ERVL -36 406 33 5 956 307 309 45 22 chr17 48725922 48726144 -46546507 + L1MEf LINE L1 1879 2105 -4137 5 956 619 276 11 22 chr17 48726257 48726560 -46546091 - RMER10B LTR ERVL -11 387 123 5 956 2475 151 39 10 chr17 48726568 48727027 -46545624 - RMER20A LTR ERVK 0 516 4 5 956 306 0 0 0 chr17 48727027 48727061 -46545590 + (TATG)n Simple_repeat Simple_repeat 4 37 0 5 956 207 0 0 0 chr17 48727165 48727188 -46545463 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 956 475 181 39 106 chr17 48727188 48727396 -46545255 + L1MEf LINE L1 2118 2308 -3838 5 956 385 299 141 28 chr17 48727413 48727505 -46545146 + L1MB3 LINE L1 5552 5656 -656 5 956 417 86 0 0 chr17 48727505 48727563 -46545088 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 956 490 280 75 20 chr17 48727563 48727822 -46544829 + L1MB3 LINE L1 5657 5940 -243 5 956 338 284 87 17 chr17 48727872 48728044 -46544607 + L1MB3 LINE L1 5949 6132 -39 5 956 482 297 45 5 chr17 48728087 48728310 -46544341 + L1MEf LINE L1 2320 2551 -3595 5 956 479 45 15 0 chr17 48728327 48728393 -46544258 + (CA)n Simple_repeat Simple_repeat 1 67 0 5 956 230 56 0 27 chr17 48728554 48728591 -46544060 + (TTCCC)n Simple_repeat Simple_repeat 3 38 0 5 956 198 71 0 0 chr17 48728679 48728707 -46543944 + (TATG)n Simple_repeat Simple_repeat 3 30 0 5 956 643 261 6 43 chr17 48728803 48728967 -46543684 - MTE2a LTR MaLR 0 379 222 5 956 574 216 10 0 chr17 48728973 48729075 -46543576 - MTE2a LTR MaLR -251 108 6 5 956 197 265 12 0 chr17 48729855 48729938 -46542713 + (TG)n Simple_repeat Simple_repeat 1 84 0 5 956 473 362 0 19 chr17 48729941 48730096 -46542555 + B4 SINE B4 140 291 -1 5 956 1840 147 71 33 chr17 48730097 48730490 -46542161 + IAPLTR2_Mm LTR ERVK 1 408 -67 5 956 521 249 80 16 chr17 48730671 48730859 -46541792 + L1MA7 LINE L1 6081 6280 -11 5 956 547 298 0 21 chr17 48730859 48731003 -46541648 + ID_B1 SINE B4 79 219 -5 5 956 628 286 128 53 chr17 48731173 48731549 -46541102 - Lx8 LINE L1 -83 7390 6987 5 956 271 113 0 36 chr17 48731813 48731868 -46540783 + (TCCC)n Simple_repeat Simple_repeat 1 53 0 5 956 516 364 84 25 chr17 48732157 48732515 -46540136 + Charlie7 DNA MER1_type 308 686 -1926 5 956 1068 287 113 11 chr17 48732575 48732955 -46539696 + MTD LTR MaLR 1 419 0 5 956 286 239 122 17 chr17 48733204 48733319 -46539332 - L1ME3B LINE L1 -326 5914 5788 5 956 261 0 0 0 chr17 48733550 48733579 -46539072 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 5 956 557 301 104 30 chr17 48733626 48733753 -46538898 - B4 SINE B4 0 292 154 5 956 270 0 0 0 chr17 48733753 48733783 -46538868 + (CAGG)n Simple_repeat Simple_repeat 3 32 0 5 956 557 301 104 30 chr17 48733783 48733925 -46538726 - B4 SINE B4 -139 153 3 5 956 483 345 45 9 chr17 48734101 48734323 -46538328 - MLT1A0 LTR MaLR -2 363 134 5 956 207 0 0 0 chr17 48734401 48734424 -46538227 + (TC)n Simple_repeat Simple_repeat 2 24 0 5 956 997 106 0 0 chr17 48734425 48734566 -46538085 - B1_Mus1 SINE Alu 0 148 8 5 956 216 0 0 0 chr17 48734566 48734590 -46538061 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 956 782 241 127 56 chr17 48734596 48734864 -46537787 + MTE2a LTR MaLR 52 338 -41 5 956 399 336 71 0 chr17 48735142 48735282 -46537369 + RSINE1 SINE B4 3 152 -13 5 956 479 196 70 26 chr17 48735865 48735980 -46536671 - B3 SINE B2 -6 210 91 5 956 210 37 0 0 chr17 48736142 48736169 -46536482 + (TTG)n Simple_repeat Simple_repeat 2 28 0 5 956 21 0 0 0 chr17 48736679 48736700 -46535951 + AT_rich Low_complexity Low_complexity 1 21 0 5 956 332 217 54 54 chr17 48736742 48736854 -46535797 - B3 SINE B2 0 216 105 5 956 307 296 30 20 chr17 48736834 48736934 -46535717 + ID_B1 SINE B4 108 208 -16 5 956 459 0 0 0 chr17 48736934 48736985 -46535666 + (TTA)n Simple_repeat Simple_repeat 1 51 0 5 956 3865 112 58 12 chr17 48736986 48737571 -46535080 - Lx4A LINE L1 -3 7055 6444 5 956 279 255 115 21 chr17 48737616 48737712 -46534939 - L2b LINE L2 0 3375 3271 5 956 1002 238 5 19 chr17 48738392 48738606 -46534045 - B3 SINE B2 -2 214 4 5 956 318 316 16 33 chr17 48738687 48738870 -46533781 + CT-rich Low_complexity Low_complexity 1 180 0 5 956 311 318 168 23 chr17 48740253 48740562 -46532089 - MLT1L LTR MaLR -18 592 239 5 956 1412 69 21 0 chr17 48741351 48741539 -46531112 + B2_Mm1t SINE B2 2 193 0 5 956 314 89 0 22 chr17 48741608 48741654 -46530997 - ORR1D2 LTR MaLR 0 370 326 5 956 224 302 0 0 chr17 48742290 48742353 -46530298 + G-rich Low_complexity Low_complexity 1 63 0 5 956 395 269 0 85 chr17 48743292 48743410 -46529241 - PB1D10 SINE Alu -2 115 8 5 956 298 298 53 90 chr17 48743312 48743445 -46529206 - ID_B1 SINE B4 -48 176 49 5 956 441 0 0 0 chr17 48743851 48743900 -46528751 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 956 805 265 31 0 chr17 48744133 48744329 -46528322 + B4 SINE B4 2 203 -89 5 956 671 116 237 15 chr17 48744514 48744645 -46528006 - MTC LTR MaLR -259 162 3 5 956 257 337 0 11 chr17 48744672 48744759 -46527892 + MTE2b LTR MaLR 210 295 -84 5 956 383 210 68 29 chr17 48745695 48745798 -46526853 + ID_B1 SINE B4 102 208 -16 5 956 248 227 56 174 chr17 48745798 48745839 -46526812 + B1F SINE Alu 21 147 -2 5 956 545 318 7 45 chr17 48745846 48746001 -46526650 + ID_B1 SINE B4 65 213 -11 5 956 854 192 5 85 chr17 48746295 48746483 -46526168 + B4A SINE B4 120 292 0 5 956 186 103 0 0 chr17 48746486 48746515 -46526136 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 5 956 377 129 14 0 chr17 48746525 48746595 -46526056 + (GGA)n Simple_repeat Simple_repeat 2 72 0 5 956 674 310 18 18 chr17 48747248 48747468 -46525183 + ID_B1 SINE B4 4 223 -1 5 956 405 0 0 0 chr17 48747864 48747909 -46524742 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 956 745 273 0 38 chr17 48748386 48748569 -46524082 - B3A SINE B2 -20 178 3 5 956 599 195 102 0 chr17 48749013 48749141 -46523510 + B1F SINE Alu 1 141 -8 5 956 302 194 0 56 chr17 48749161 48749232 -46523419 + ID4_ SINE ID 4 70 -13 5 956 238 26 25 25 chr17 48749939 48749979 -46522672 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 5 956 1172 52 0 0 chr17 48749979 48750115 -46522536 - B1_Mus2 SINE Alu -10 137 2 5 956 905 229 50 5 chr17 48750656 48750745 -46521906 + ID_B1 SINE B4 3 92 -132 5 956 379 12 100 0 chr17 48750745 48750825 -46521826 + (CGGTG)n Simple_repeat Simple_repeat 4 91 0 5 956 905 229 50 5 chr17 48750825 48750937 -46521714 + ID_B1 SINE B4 93 212 -12 5 956 180 224 48 79 chr17 48751820 48751883 -46520768 - MIRm SINE MIR -141 135 75 5 956 249 265 0 22 chr17 48752002 48752137 -46520514 + C-rich Low_complexity Low_complexity 5 136 0 5 956 275 365 35 28 chr17 48752280 48752421 -46520230 - L3 LINE CR1 -1109 3380 3239 6 956 851 218 0 79 chr17 48752880 48753094 -46519557 + B3A SINE B2 2 198 0 6 956 805 149 44 7 chr17 48753100 48753235 -46519416 + B1_Mm SINE Alu 1 140 -7 6 956 730 300 33 25 chr17 48753257 48753500 -46519151 + MLT1C LTR MaLR 168 412 -55 6 956 748 297 110 54 chr17 48753640 48753957 -46518694 - MTEa LTR MaLR 0 379 45 6 956 204 236 73 0 chr17 48754233 48754288 -46518363 + MIRb SINE MIR 191 249 -19 6 956 398 336 13 13 chr17 48755001 48755155 -46517496 - MER20 DNA MER1_type -38 181 28 6 956 216 0 0 0 chr17 48755620 48755644 -46517007 + (A)n Simple_repeat Simple_repeat 1 24 0 6 956 859 324 60 9 chr17 48755841 48756166 -46516485 - ORR1E LTR MaLR 0 374 15 6 956 290 289 44 52 chr17 48756664 48756799 -46515852 + MLT1B LTR MaLR 2 135 -255 6 956 358 235 47 75 chr17 48756941 48757047 -46515604 + B4 SINE B4 190 292 0 6 956 2676 209 80 92 chr17 48757444 48758141 -46514510 + RMER1A Other Other 15 522 -544 6 956 207 0 0 0 chr17 48758141 48758164 -46514487 + (GGTTG)n Simple_repeat Simple_repeat 4 26 0 6 956 2676 189 55 20 chr17 48758164 48758636 -46514015 + RMER1A Other Other 461 1066 0 6 957 228 161 0 0 chr17 48759043 48759105 -46513546 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 957 404 165 0 23 chr17 48759506 48759593 -46513058 + (CATATA)n Simple_repeat Simple_repeat 4 88 0 6 957 293 26 0 26 chr17 48759609 48759648 -46513003 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 957 227 294 143 29 chr17 48759901 48760076 -46512575 + Kanga2_a DNA Tc2 205 399 -489 6 957 387 0 0 0 chr17 48760160 48760203 -46512448 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 957 522 0 0 0 chr17 48760203 48760260 -46512391 + (GA)n Simple_repeat Simple_repeat 2 59 0 6 957 795 273 5 35 chr17 48760285 48760486 -46512165 + B3A SINE B2 4 198 0 6 957 606 277 90 6 chr17 48760766 48760944 -46511707 + B3A SINE B2 6 198 0 6 957 999 289 151 93 chr17 48761218 48761951 -46510700 + Tigger6a DNA MER2_type 253 1028 -55 6 957 241 280 146 39 chr17 48761924 48762054 -46510597 - B1_Mus1 SINE Alu 0 148 5 6 957 437 248 110 45 chr17 48762054 48762083 -46510568 - ID_B1 SINE B4 -62 226 66 6 957 251 196 18 18 chr17 48762153 48762210 -46510441 - MTEa LTR MaLR -8 371 315 6 957 332 208 0 10 chr17 48762210 48762307 -46510344 + GA-rich Low_complexity Low_complexity 3 98 0 6 957 552 222 19 0 chr17 48762307 48762415 -46510236 - MTEa LTR MaLR -54 325 216 6 957 2318 105 0 30 chr17 48762451 48762784 -46509867 + ORR1A2 LTR MaLR 1 323 -4 6 957 471 302 42 21 chr17 48762733 48762875 -46509776 - MTEa LTR MaLR -231 148 4 6 957 240 354 38 23 chr17 48763432 48763565 -46509086 + MIR3 SINE MIR 73 207 -1 6 957 180 0 0 0 chr17 48763854 48763874 -46508777 + (TCC)n Simple_repeat Simple_repeat 2 21 0 6 957 283 333 35 44 chr17 48764499 48764612 -46508039 - MER91C DNA Tip100 0 140 29 6 957 213 293 116 47 chr17 48764638 48764767 -46507884 - MIR SINE MIR -23 239 102 6 957 533 332 60 39 chr17 48765926 48766208 -46506443 + B4A SINE B4 2 289 -3 6 957 761 255 186 76 chr17 48766589 48766852 -46505799 - B4A SINE B4 0 292 1 6 957 419 321 0 0 chr17 48766866 48766975 -46505676 - PB1D7 SINE Alu -11 109 1 6 957 1342 117 361 4 chr17 48767544 48767785 -46504866 + ORR1A2 LTR MaLR 1 327 0 6 957 663 314 59 8 chr17 48767816 48768031 -46504620 + ID_B1 SINE B4 9 230 -62 6 957 949 197 5 49 chr17 48768337 48768540 -46504111 + ORR1D1 LTR MaLR 1 194 -180 6 957 1624 54 0 0 chr17 48768544 48768748 -46503903 - Lx3_Mus LINE L1 -513 6496 6293 6 957 3593 77 31 2 chr17 48768760 48769244 -46503407 + Lx3_Mus LINE L1 6511 7008 -1 6 957 529 286 137 0 chr17 48769244 48769406 -46503245 + ORR1D1 LTR MaLR 179 374 0 6 957 353 231 63 13 chr17 48769429 48769508 -46503143 + B4 SINE B4 1 83 -209 6 957 263 353 12 12 chr17 48769578 48769664 -46502987 + RSINE1 SINE B4 78 163 -2 6 957 27 29 0 0 chr17 48769673 48769707 -46502944 + AT_rich Low_complexity Low_complexity 1 34 0 6 957 678 44 0 0 chr17 48769722 48769812 -46502839 + (CA)n Simple_repeat Simple_repeat 2 91 0 6 957 3656 185 59 44 chr17 48769814 48770854 -46501797 + Lx9 LINE L1 658 1695 -4152 6 957 213 39 0 0 chr17 48770854 48770880 -46501771 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 6 957 3656 183 48 14 chr17 48770880 48771294 -46501357 + Lx9 LINE L1 1696 2141 -3706 6 957 2973 202 56 216 chr17 48771297 48772551 -46500100 - RMER1B Other Other -9 1057 5 6 957 7125 219 95 36 chr17 48772609 48772858 -46499793 + Lx9 LINE L1 2124 2384 -3463 6 957 366 80 0 0 chr17 48772858 48772908 -46499743 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 6 957 7125 219 95 36 chr17 48772908 48773899 -46498752 + Lx9 LINE L1 2385 3465 -2382 6 957 336 102 0 0 chr17 48773899 48773948 -46498703 + (CAT)n Simple_repeat Simple_repeat 3 51 0 6 957 7125 219 95 36 chr17 48773948 48775006 -46497645 + Lx9 LINE L1 3466 4558 -1289 6 957 985 289 45 59 chr17 48775006 48775432 -46497219 + BGLII_B LTR ERVK 1 420 -21 6 957 1999 206 20 68 chr17 48775440 48775986 -46496665 + Lx9 LINE L1 4541 5060 -787 6 957 3155 193 33 45 chr17 48776454 48776671 -46495980 + Lx9 LINE L1 5056 5253 -594 6 957 1275 84 0 0 chr17 48776671 48776849 -46495802 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 6 957 3155 212 48 37 chr17 48776849 48777635 -46495016 + Lx9 LINE L1 5254 6103 -1541 6 957 470 246 158 37 chr17 48777825 48778040 -46494611 + MER112 DNA MER1_type 21 261 0 6 957 205 374 0 0 chr17 48778379 48778462 -46494189 + MIRc SINE MIR 142 224 -44 6 957 387 262 2 5 chr17 48778506 48778597 -46494054 + B4 SINE B4 7 95 -197 6 957 705 260 69 65 chr17 48778665 48778941 -46493710 + Lx6 LINE L1 7182 7458 -2 6 957 570 320 57 111 chr17 48778952 48779268 -46493383 + MTE2a LTR MaLR 6 304 -75 6 957 1880 190 173 25 chr17 48779331 48779806 -46492845 + MT2B LTR ERVL 2 546 -55 6 957 582 245 75 0 chr17 48779839 48779986 -46492665 + B4 SINE B4 84 241 -51 6 957 450 0 0 0 chr17 48780003 48780053 -46492598 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 957 243 0 0 0 chr17 48780053 48780079 -46492572 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 957 834 272 27 0 chr17 48780172 48780356 -46492295 - B3 SINE B2 -11 205 17 6 957 325 0 0 162 chr17 48780787 48780960 -46491691 + (CTCTG)n Simple_repeat Simple_repeat 5 149 0 6 957 721 209 129 30 chr17 48780960 48781162 -46491489 - RLTR17 LTR ERVK -55 637 416 6 957 1089 113 53 16 chr17 48781141 48781329 -46491322 - RLTR17 LTR ERVK -497 195 1 6 957 277 255 147 6 chr17 48781331 48781487 -46491164 + L1MA4 LINE L1 5713 5916 -384 6 957 1183 231 103 81 chr17 48781708 48782111 -46490540 - MTD LTR MaLR -14 405 6 6 957 214 267 187 0 chr17 48782157 48782232 -46490419 - L4 LINE RTE -519 1510 1422 6 957 864 274 19 0 chr17 48782686 48782898 -46489753 - B3 SINE B2 0 216 1 6 957 464 178 148 0 chr17 48782911 48783012 -46489639 + RMER21B LTR ERV1 1 116 -726 6 957 1032 195 89 21 chr17 48783080 48783316 -46489335 + RMER21B LTR ERV1 316 567 -275 6 957 792 250 9 62 chr17 48783691 48783917 -46488734 - B3 SINE B2 0 216 3 6 957 230 146 24 0 chr17 48783948 48783989 -46488662 - B3 SINE B2 -174 42 1 6 957 826 286 127 48 chr17 48784571 48784710 -46487941 - Lx6 LINE L1 -629 6831 6660 6 957 726 12 0 0 chr17 48784710 48784793 -46487858 + (TC)n Simple_repeat Simple_repeat 1 83 0 6 957 4632 49 0 0 chr17 48784793 48785342 -46487309 - L1_Mus1 LINE L1 -6 6561 6013 6 957 1027 228 37 5 chr17 48785342 48785558 -46487093 - Lx5 LINE L1 -604 6446 6224 6 957 338 194 218 68 chr17 48785558 48785691 -46486960 - Lx6 LINE L1 -1336 6124 5972 6 957 298 42 0 40 chr17 48785705 48785755 -46486896 + (TTTTG)n Simple_repeat Simple_repeat 1 48 0 6 957 1218 54 0 13 chr17 48785773 48785923 -46486728 + B1_Mus1 SINE Alu 1 148 0 6 957 319 68 83 25 chr17 48785925 48786045 -46486606 + A-rich Low_complexity Low_complexity 3 129 0 6 957 487 316 114 43 chr17 48786791 48787185 -46485466 + MT2A LTR ERVL 12 433 -100 6 957 252 0 0 0 chr17 48787479 48787507 -46485144 + (A)n Simple_repeat Simple_repeat 1 28 0 6 957 450 0 0 0 chr17 48788203 48788253 -46484398 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 957 870 322 25 0 chr17 48788300 48788542 -46484109 + MTEa LTR MaLR 1 248 -131 6 957 792 252 160 80 chr17 48788554 48788942 -46483709 - MTD LTR MaLR 0 419 1 6 957 292 161 22 90 chr17 48788942 48789029 -46483622 + MTEa LTR MaLR 294 374 -5 6 957 1180 286 90 27 chr17 48789429 48789924 -46482727 + L1MD LINE L1 2126 2645 -3501 6 957 432 97 0 0 chr17 48789924 48789986 -46482665 + (TG)n Simple_repeat Simple_repeat 1 62 0 6 957 1180 286 90 27 chr17 48789986 48790236 -46482415 + L1MD LINE L1 2646 2917 -3229 6 957 948 246 153 15 chr17 48790247 48790710 -46481941 + L1MD LINE L1 2984 3510 -2636 6 957 1763 197 52 35 chr17 48790712 48791138 -46481513 + BGLII_B LTR ERVK 1 433 -8 6 957 434 171 21 64 chr17 48791144 48791238 -46481413 + PB1D9 SINE Alu 12 101 -19 6 957 1915 166 23 14 chr17 48791484 48791833 -46480818 + RLTR15 LTR ERVK 8 359 0 6 957 467 275 81 0 chr17 48792257 48792406 -46480245 + RMER15-int LTR ERVL 1509 1669 -3330 6 957 5932 203 50 20 chr17 48792410 48793103 -46479548 - Lx7 LINE L1 -299 7397 6669 6 957 1982 111 98 0 chr17 48793103 48793400 -46479251 + ORR1A3 LTR MaLR 1 326 0 6 957 22372 177 95 30 chr17 48793400 48794901 -46477750 - Lx7 LINE L1 -1028 6668 5109 6 957 5434 45 0 11 chr17 48794901 48795556 -46477095 - L1_Mus1 LINE L1 -6 6561 5914 6 957 22372 154 64 42 chr17 48795556 48797057 -46475594 - Lx7 LINE L1 -772 5108 3662 6 957 2505 164 2 9 chr17 48797057 48797481 -46475170 - MTC LTR MaLR 0 421 1 6 957 22372 166 56 33 chr17 48797481 48800475 -46472176 - Lx7 LINE L1 -2219 3661 465 6 957 534 225 83 23 chr17 48800513 48800684 -46471967 + L1MD2 LINE L1 5880 6066 -113 6 957 899 255 19 5 chr17 48802471 48802684 -46469967 - B3 SINE B2 0 216 1 6 957 1129 93 109 17 chr17 48802832 48803007 -46469644 - B2_Mm1a SINE B2 -2 191 1 6 957 557 311 112 80 chr17 48803055 48803331 -46469320 + B4 SINE B4 8 292 0 6 957 198 167 0 0 chr17 48803442 48803478 -46469173 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 957 206 359 0 0 chr17 48803526 48803604 -46469047 + (CA)n Simple_repeat Simple_repeat 1 78 0 6 957 510 215 0 0 chr17 48803606 48803699 -46468952 + B3A SINE B2 1 93 -105 6 957 696 24 0 0 chr17 48803970 48804052 -46468599 + (TC)n Simple_repeat Simple_repeat 2 83 0 6 957 198 0 0 0 chr17 48804386 48804408 -46468243 + (GGGTG)n Simple_repeat Simple_repeat 5 26 0 6 957 583 175 20 32 chr17 48804790 48805194 -46467457 + (TG)n Simple_repeat Simple_repeat 1 398 0 6 957 678 107 31 25 chr17 48805206 48805369 -46467282 + (TG)n Simple_repeat Simple_repeat 1 164 0 6 957 341 351 119 38 chr17 48805393 48805501 -46467150 - B4A SINE B4 -8 284 176 6 957 219 36 0 0 chr17 48805501 48805529 -46467122 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 957 341 351 119 38 chr17 48805529 48805563 -46467088 - B4A SINE B4 -117 175 3 6 957 519 239 85 8 chr17 48805563 48805681 -46466970 - B3A SINE B2 -69 129 3 7 957 249 33 0 0 chr17 48805681 48805711 -46466940 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 7 957 689 263 97 5 chr17 48805711 48805906 -46466745 - B4A SINE B4 -79 213 1 7 957 756 234 32 5 chr17 48806234 48806423 -46466228 - RMER5 LTR ERV1 0 534 341 7 957 556 161 0 61 chr17 48806429 48806528 -46466123 + RSINE1 SINE B4 13 105 -60 7 957 492 18 0 0 chr17 48806536 48806593 -46466058 + (CA)n Simple_repeat Simple_repeat 1 57 0 7 957 6998 140 13 7 chr17 48806601 48808451 -46464200 + Lx LINE L1 4758 6623 -31 7 957 573 287 122 71 chr17 48808451 48808804 -46463847 - RMER5 LTR ERV1 -160 374 4 7 957 558 0 0 0 chr17 48809010 48809072 -46463579 + (GA)n Simple_repeat Simple_repeat 2 63 0 7 957 1188 171 65 28 chr17 48809193 48809440 -46463211 - RMER6C LTR ERVK -88 602 347 7 957 203 182 104 0 chr17 48809440 48809517 -46463134 + (CAGTT)n Simple_repeat Simple_repeat 2 86 0 7 957 353 250 0 62 chr17 48809520 48809601 -46463050 + RMER6-int LTR ERVK 149 224 -2953 7 957 6055 121 46 16 chr17 48809615 48810571 -46462080 + RMER6-int LTR ERVK 610 1594 -1583 7 957 1216 274 36 10 chr17 48810574 48810883 -46461768 - MTEa LTR MaLR -27 352 36 7 957 929 283 18 36 chr17 48810894 48810918 -46461733 - B4A SINE B4 -21 271 249 7 957 297 51 0 0 chr17 48810918 48810957 -46461694 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 7 957 1157 58 0 0 chr17 48810957 48811094 -46461557 - B1_Mm SINE Alu -9 138 2 7 957 929 283 18 36 chr17 48811094 48811343 -46461308 - B4A SINE B4 -44 248 3 7 957 1972 146 140 8 chr17 48811520 48811892 -46460759 - MTC LTR MaLR 0 421 1 7 957 261 167 0 0 chr17 48812021 48812075 -46460576 + (CA)n Simple_repeat Simple_repeat 1 54 0 7 957 1046 244 164 13 chr17 48812885 48813196 -46459455 + MTD LTR MaLR 52 409 -10 7 957 246 258 0 15 chr17 48813380 48813447 -46459204 + MLT1A1 LTR MaLR 343 408 0 7 957 1097 275 35 39 chr17 48814765 48814804 -46457847 + B4 SINE B4 5 40 -252 7 957 960 217 124 108 chr17 48814804 48815176 -46457475 - MTE2a LTR MaLR -1 378 1 7 957 1097 275 35 39 chr17 48815176 48815420 -46457231 + B4 SINE B4 41 287 -5 7 957 382 279 42 24 chr17 48815422 48815587 -46457064 + L1M2 LINE L1 4872 5039 -1104 7 957 264 330 91 20 chr17 48816014 48816113 -46456538 + B3A SINE B2 77 182 -16 7 957 348 272 68 59 chr17 48816347 48816566 -46456085 - L1MD2 LINE L1 -406 5953 5733 7 957 414 0 0 0 chr17 48816578 48816624 -46456027 + (CTG)n Simple_repeat Simple_repeat 3 48 0 7 957 974 172 109 0 chr17 48816829 48817021 -46455630 - B3 SINE B2 -3 213 1 7 957 315 338 202 6 chr17 48817069 48817227 -46455424 - L1MD2 LINE L1 -752 5394 5206 7 957 365 279 68 76 chr17 48817256 48817388 -46455263 - B3 SINE B2 0 216 86 7 957 533 265 102 0 chr17 48818232 48818379 -46454272 - B4A SINE B4 -130 162 1 7 957 829 257 119 11 chr17 48819155 48819415 -46453236 + B4 SINE B4 1 288 -4 7 957 780 264 35 10 chr17 48819672 48819871 -46452780 + B3 SINE B2 2 205 -11 7 957 917 108 158 0 chr17 48820959 48821117 -46451534 - B2_Mm1t SINE B2 -5 188 6 7 957 453 310 48 33 chr17 48821278 48821488 -46451163 + Lx8 LINE L1 6884 7096 -377 7 957 679 266 90 36 chr17 48824775 48825052 -46447599 - B4A SINE B4 0 292 1 7 957 520 211 26 179 chr17 48825514 48825704 -46446947 + RMER15 LTR ERVL 1 161 -414 7 957 642 270 137 22 chr17 48825701 48825915 -46446736 + RMER15 LTR ERVL 275 514 -61 7 957 653 268 194 19 chr17 48825915 48826254 -46446397 - MTD LTR MaLR 0 379 1 7 957 202 186 0 44 chr17 48826307 48826352 -46446299 + (CACAT)n Simple_repeat Simple_repeat 5 47 0 7 957 504 206 68 10 chr17 48826893 48826996 -46445655 + B1F SINE Alu 1 109 -40 7 957 3489 28 2 2 chr17 48827819 48828215 -46444436 - MTA_Mm LTR MaLR 0 396 1 7 957 1940 203 18 38 chr17 48828585 48829031 -46443620 + RMER10A LTR ERVL 5 441 -1 7 957 280 164 30 0 chr17 48829070 48829137 -46443514 + CT-rich Low_complexity Low_complexity 1 69 0 7 957 495 73 0 0 chr17 48829361 48829429 -46443222 + (TCC)n Simple_repeat Simple_repeat 1 68 0 7 957 373 307 0 0 chr17 48829435 48829523 -46443128 - PB1D10 SINE Alu -28 89 2 7 957 884 270 22 22 chr17 48831792 48832023 -46440628 - 7SK RNA RNA -92 239 9 7 957 232 208 42 0 chr17 48832010 48832058 -46440593 - 7SK RNA RNA -268 63 14 7 957 237 250 39 0 chr17 48832131 48832183 -46440468 - 7SK RNA RNA -269 62 9 7 957 771 262 138 28 chr17 48832676 48832976 -46439675 + ORR1E LTR MaLR 1 347 -23 7 957 607 262 42 37 chr17 48833231 48833421 -46439230 - B3A SINE B2 -6 192 2 7 957 318 26 0 0 chr17 48834669 48834708 -46437943 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 7 957 298 296 51 0 chr17 48834715 48834813 -46437838 + MIR SINE MIR 3 105 -157 7 957 333 82 0 0 chr17 48835905 48835954 -46436697 + (TCTG)n Simple_repeat Simple_repeat 3 51 0 7 957 269 300 32 53 chr17 48836119 48836214 -46436437 + B4 SINE B4 75 167 -125 7 957 385 241 17 11 chr17 48836141 48836232 -46436419 + PB1D10 SINE Alu 8 108 -19 7 957 216 0 0 0 chr17 48836256 48836280 -46436371 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 957 435 260 29 0 chr17 48837008 48837112 -46435539 + B1_Mus1 SINE Alu 37 143 -5 7 957 709 277 6 25 chr17 48837135 48837298 -46435353 + B3A SINE B2 3 162 -36 7 957 261 0 0 0 chr17 48837311 48837340 -46435311 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 7 957 285 283 44 113 chr17 48837634 48837837 -46434814 - ORR1E LTR MaLR -66 293 105 7 957 237 345 36 0 chr17 48837930 48838014 -46434637 - MLT2B3 LTR ERVL -467 87 1 7 957 631 264 13 26 chr17 48838066 48838218 -46434433 + RSINE1 SINE B4 8 157 -8 7 957 23 0 0 0 chr17 48838222 48838245 -46434406 + AT_rich Low_complexity Low_complexity 1 23 0 7 957 390 273 39 8 chr17 48839280 48839409 -46433242 + CT-rich Low_complexity Low_complexity 3 135 0 7 957 292 251 5 32 chr17 48839635 48839820 -46432831 + GA-rich Low_complexity Low_complexity 1 180 0 7 957 261 351 59 26 chr17 48839939 48840091 -46432560 - L2b LINE L2 -18 3357 3201 7 957 387 0 0 0 chr17 48840443 48840486 -46432165 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 957 874 284 43 14 chr17 48840492 48840774 -46431877 + B4 SINE B4 2 291 -1 7 957 437 50 17 0 chr17 48841868 48841928 -46430723 + (CAAG)n Simple_repeat Simple_repeat 2 62 0 7 957 367 280 117 18 chr17 48842389 48842560 -46430091 + LTR16C LTR ERVL 287 474 -15 7 957 516 287 26 32 chr17 48842936 48843091 -46429560 + RMER15 LTR ERVL 276 429 -146 7 957 840 333 48 22 chr17 48843751 48844024 -46428627 + B4 SINE B4 2 281 -11 7 957 715 73 0 24 chr17 48844161 48844287 -46428364 + (TTTTG)n Simple_repeat Simple_repeat 2 124 0 7 957 1189 50 0 0 chr17 48844287 48844426 -46428225 - B1_Mus1 SINE Alu -9 139 1 7 957 683 284 33 41 chr17 48844712 48844954 -46427697 - RMER15 LTR ERVL 0 575 336 7 957 264 122 0 0 chr17 48845661 48845702 -46426949 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 957 468 312 12 48 chr17 48845712 48845877 -46426774 - B4A SINE B4 0 292 134 7 957 1455 115 164 75 chr17 48845876 48846168 -46426483 - ORR1A3 LTR MaLR -8 318 1 7 957 330 331 32 38 chr17 48846168 48846314 -46426337 - B4A SINE B4 -146 146 2 7 957 265 231 46 0 chr17 48846661 48846726 -46425925 - MTE2a LTR MaLR 0 379 312 7 957 1814 206 47 0 chr17 48846717 48847082 -46425569 + ORR1D2-int LTR MaLR 987 1368 -2 7 957 445 262 146 40 chr17 48847084 48847283 -46425368 + ORR1D2 LTR MaLR 1 220 -150 7 957 666 219 18 157 chr17 48847295 48847512 -46425139 - MTE2a LTR MaLR -183 196 10 7 957 688 228 37 0 chr17 48848459 48848595 -46424056 - B1_Mur3 SINE Alu -6 143 3 7 957 181 122 20 20 chr17 48848723 48848753 -46423898 + A-rich Low_complexity Low_complexity 5 35 0 7 957 180 0 0 0 chr17 48848753 48848773 -46423878 + (CCA)n Simple_repeat Simple_repeat 1 20 0 7 957 181 122 20 20 chr17 48848773 48848792 -46423859 + A-rich Low_complexity Low_complexity 36 53 0 7 957 228 35 0 0 chr17 48848803 48848832 -46423819 + (CAACC)n Simple_repeat Simple_repeat 5 33 0 7 957 301 288 34 4 chr17 48848937 48849055 -46423596 - MLT1A1 LTR MaLR -228 137 17 7 957 191 83 83 0 chr17 48849762 48849798 -46422853 + G-rich Low_complexity Low_complexity 5 43 0 7 957 738 296 167 0 chr17 48850134 48850367 -46422284 - B4 SINE B4 -14 278 7 7 957 422 331 136 18 chr17 48850501 48850787 -46421864 - MER77 LTR ERVL -207 400 81 7 957 596 310 67 63 chr17 48851085 48851640 -46421011 - L1ME4a LINE L1 -97 6027 5471 7 957 243 296 19 0 chr17 48852042 48852096 -46420555 - MLT1E1A LTR MaLR -341 339 285 7 957 306 0 0 0 chr17 48852459 48852493 -46420158 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 957 207 0 0 0 chr17 48852521 48852544 -46420107 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 957 341 265 0 10 chr17 48853332 48853431 -46419220 + (CA)n Simple_repeat Simple_repeat 1 98 0 7 957 822 293 0 70 chr17 48853472 48853685 -46418966 + B3A SINE B2 3 200 -16 7 957 504 252 0 27 chr17 48853955 48854065 -46418586 - PB1D7 SINE Alu 0 120 14 7 957 211 279 15 0 chr17 48854077 48854145 -46418506 + MIRc SINE MIR 108 176 -92 7 957 1167 281 108 66 chr17 48854983 48855484 -46417167 + MT2A LTR ERVL 8 536 -19 7 957 246 185 102 0 chr17 48855484 48855544 -46417107 + MT2A LTR ERVL 501 561 -1 7 957 369 0 0 0 chr17 48855896 48855937 -46416714 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 957 231 226 0 0 chr17 48856105 48856158 -46416493 - MIR SINE MIR -136 126 74 7 957 1261 246 38 79 chr17 48856671 48857064 -46415587 - MTE2a LTR MaLR 0 379 3 7 957 324 308 24 40 chr17 48857073 48857198 -46415453 + MIR3 SINE MIR 76 198 -10 7 957 625 296 10 51 chr17 48857315 48857511 -46415140 - B3A SINE B2 0 198 11 7 957 622 240 48 0 chr17 48857558 48857683 -46414968 + ID_B1 SINE B4 84 214 -10 8 957 594 245 101 30 chr17 48857683 48857745 -46414906 + B4 SINE B4 95 165 -127 8 957 3546 23 2 0 chr17 48857745 48858140 -46414511 - MTA_Mm LTR MaLR 0 396 1 8 957 594 245 101 30 chr17 48858140 48858245 -46414406 + B4 SINE B4 166 274 -18 8 957 612 62 0 0 chr17 48858842 48858923 -46413728 + (TCTCCC)n Simple_repeat Simple_repeat 6 86 0 8 957 981 297 39 66 chr17 48859116 48859557 -46413094 + MTC LTR MaLR 1 419 0 8 957 420 281 0 0 chr17 48859563 48859741 -46412910 + (CA)n Simple_repeat Simple_repeat 1 178 0 8 957 540 262 98 0 chr17 48860637 48860709 -46411942 + ID SINE ID 3 86 -138 8 957 243 318 48 0 chr17 48860709 48860772 -46411879 + B1F SINE Alu 3 68 -81 8 957 307 331 55 17 chr17 48862283 48862401 -46410250 - MIRc SINE MIR -101 175 47 8 957 868 261 10 0 chr17 48862421 48862616 -46410035 + ID_B1 SINE B4 1 197 -27 8 957 342 0 0 0 chr17 48863100 48863138 -46409513 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 957 1118 264 26 104 chr17 48863200 48863415 -46409236 + RLTR11B LTR ERVK 1 226 -302 8 957 620 26 0 13 chr17 48863415 48863494 -46409157 + (GGA)n Simple_repeat Simple_repeat 2 79 0 8 957 1118 246 5 119 chr17 48863494 48863748 -46408903 + RLTR11B LTR ERVK 216 430 -23 8 957 439 257 175 32 chr17 48864067 48864284 -46408367 + MER54B LTR ERVL 123 370 -423 8 957 198 0 0 0 chr17 48864453 48864475 -46408176 + (CCAA)n Simple_repeat Simple_repeat 2 23 0 8 957 272 342 134 22 chr17 48864476 48864700 -46407951 + MER54B LTR ERVL 538 786 -7 8 957 1016 212 14 19 chr17 48865057 48865273 -46407378 + B3 SINE B2 2 216 0 8 957 236 53 26 0 chr17 48865275 48865313 -46407338 + (TAAAAA)n Simple_repeat Simple_repeat 3 41 0 8 957 194 321 110 30 chr17 48865320 48865484 -46407167 + L2a LINE L2 3171 3347 -79 8 957 255 31 0 0 chr17 48865736 48865768 -46406883 + (CCCCCA)n Simple_repeat Simple_repeat 4 35 0 8 957 261 0 0 0 chr17 48868444 48868473 -46404178 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 957 459 250 138 43 chr17 48868476 48868614 -46404037 - B3A SINE B2 -38 160 10 8 957 3538 32 0 128 chr17 48869469 48869969 -46402682 + RLTR10C LTR ERVK 1 436 0 8 957 1329 201 169 109 chr17 48870076 48870507 -46402144 + MT2A LTR ERVL 1 457 -76 8 957 804 21 0 0 chr17 48870508 48870602 -46402049 + (TG)n Simple_repeat Simple_repeat 2 95 0 8 957 765 212 0 0 chr17 48872478 48872657 -46399994 + GA-rich Low_complexity Low_complexity 1 179 0 8 957 212 158 0 0 chr17 48872706 48872744 -46399907 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 957 457 186 25 0 chr17 48873611 48873729 -46398922 + (CACCAT)n Simple_repeat Simple_repeat 2 122 0 8 957 430 290 116 0 chr17 48873896 48874034 -46398617 + RSINE1 SINE B4 2 155 -10 8 957 24 32 0 0 chr17 48874042 48874073 -46398578 + AT_rich Low_complexity Low_complexity 1 31 0 8 957 239 307 5 0 chr17 48874518 48874598 -46398053 - MIRc SINE MIR -143 125 39 8 957 590 256 79 23 chr17 48874749 48875040 -46397611 - MTEa LTR MaLR -1 378 18 8 957 24 53 0 0 chr17 48875129 48875167 -46397484 + AT_rich Low_complexity Low_complexity 1 38 0 8 957 867 296 40 25 chr17 48875181 48875458 -46397193 - B4A SINE B4 -10 282 2 8 957 192 40 0 0 chr17 48875544 48875569 -46397082 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 8 957 423 0 0 0 chr17 48876506 48876553 -46396098 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 8 957 197 301 66 40 chr17 48876798 48876874 -46395777 - L4 LINE RTE -238 1791 1714 8 957 185 315 66 40 chr17 48876979 48877055 -46395596 - L4 LINE RTE -238 1791 1714 8 957 194 195 49 0 chr17 48877776 48877817 -46394834 + MIR3 SINE MIR 118 160 -48 8 957 310 311 96 62 chr17 48877962 48878202 -46394449 - MIRb SINE MIR -19 249 2 8 957 228 295 51 13 chr17 48878669 48878748 -46393903 + MIRc SINE MIR 161 242 -26 8 957 210 326 126 14 chr17 48879195 48879338 -46393313 - L2b LINE L2 -2 3373 3215 8 957 1519 211 7 19 chr17 48879697 48880007 -46392644 + MTD LTR MaLR 6 311 -108 8 957 864 271 131 32 chr17 48880085 48880463 -46392188 - MTE2a LTR MaLR -14 405 3 8 957 1112 227 0 5 chr17 48881471 48881688 -46390963 - B3 SINE B2 0 216 1 8 957 671 243 40 0 chr17 48881859 48882007 -46390644 + RSINE1 SINE B4 3 156 -9 8 957 518 113 67 15 chr17 48882064 48882199 -46390452 + (CATATA)n Simple_repeat Simple_repeat 5 146 0 8 957 2687 194 66 65 chr17 48883348 48883920 -46388731 + RMER15 LTR ERVL 1 573 -2 8 957 330 229 304 6 chr17 48885518 48885676 -46386975 - B3 SINE B2 -11 205 1 8 957 841 245 75 0 chr17 48885789 48885977 -46386674 - ID_B1 SINE B4 -21 203 2 8 957 322 262 38 0 chr17 48887254 48887334 -46385317 - ORR1E LTR MaLR -276 83 1 8 957 847 238 160 130 chr17 48887776 48888144 -46384507 + MTE2a LTR MaLR 1 379 0 8 957 1212 246 26 33 chr17 48888183 48888349 -46384302 + B4A SINE B4 3 165 -127 8 957 2153 168 87 13 chr17 48888349 48888741 -46383910 + MTC LTR MaLR 1 421 0 8 957 1212 246 26 33 chr17 48888741 48888847 -46383804 + B4A SINE B4 166 273 -19 8 957 863 297 49 46 chr17 48888966 48889294 -46383357 - MER2 DNA MER2_type -13 332 4 8 957 429 359 42 25 chr17 48889295 48889532 -46383119 + MIR SINE MIR 22 262 0 8 119 242 284 52 99 chr17 48889799 48889971 -46382680 + MIRc SINE MIR 6 169 -99 8 958 764 265 148 4 chr17 48890124 48890374 -46382277 + B4A SINE B4 1 286 -6 8 958 327 104 0 0 chr17 48890426 48890474 -46382177 + (CCA)n Simple_repeat Simple_repeat 3 50 0 8 958 833 154 17 11 chr17 48891485 48891662 -46380989 + CT-rich Low_complexity Low_complexity 3 180 0 8 958 261 0 0 0 chr17 48891664 48891693 -46380958 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 8 958 766 317 48 92 chr17 48892676 48892971 -46379680 + B4A SINE B4 6 287 -5 8 958 414 0 0 0 chr17 48893000 48893046 -46379605 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 958 384 274 7 66 chr17 48893171 48893293 -46379358 + RMER30 DNA MER1_type 5 121 -81 8 958 246 62 0 0 chr17 48893293 48893325 -46379326 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 8 958 384 274 7 66 chr17 48893325 48893339 -46379312 + RMER30 DNA MER1_type 122 133 -69 8 958 588 246 30 0 chr17 48893339 48893459 -46379192 - B3 SINE B2 -14 202 65 8 958 339 234 38 28 chr17 48893512 48893618 -46379033 + MIR SINE MIR 68 180 -96 8 958 715 286 52 36 chr17 48893673 48893923 -46378728 + Charlie26a DNA MER1_type 59 312 -13 8 958 328 252 52 9 chr17 48894535 48894651 -46378000 - L1ME2 LINE L1 -52 6392 6272 8 958 808 338 68 22 chr17 48894773 48895321 -46377330 - L1ME2 LINE L1 -122 6042 5470 8 958 719 235 71 0 chr17 48895361 48895531 -46377120 - B3A SINE B2 -16 182 1 8 958 181 0 69 0 chr17 48895694 48895723 -46376928 + (TTG)n Simple_repeat Simple_repeat 1 31 0 8 958 1151 252 92 11 chr17 48895761 48896110 -46376541 - MTE2b LTR MaLR 0 379 3 8 958 230 312 117 23 chr17 48896247 48896375 -46376276 + MER101B LTR ERV1 258 397 -173 8 958 193 274 146 56 chr17 48896602 48896691 -46375960 + MIR SINE MIR 46 142 -66 8 958 516 72 0 0 chr17 48897139 48897208 -46375443 + (TA)n Simple_repeat Simple_repeat 2 70 0 8 958 576 0 0 0 chr17 48897233 48897297 -46375354 + (TC)n Simple_repeat Simple_repeat 2 65 0 8 958 180 0 0 0 chr17 48897297 48897316 -46375335 + (TG)n Simple_repeat Simple_repeat 1 20 0 8 958 379 277 99 0 chr17 48897319 48897420 -46375231 - B3A SINE B2 -42 156 46 8 958 707 224 21 51 chr17 48897440 48897608 -46375043 - ID_B1 SINE B4 -47 245 82 8 958 318 50 0 0 chr17 48898137 48898177 -46374474 + (CCCCCA)n Simple_repeat Simple_repeat 1 40 0 8 958 427 245 136 61 chr17 48899575 48899788 -46372863 + RLTR14 LTR ERV1 154 382 0 8 958 430 338 25 10 chr17 48900129 48900329 -46372322 + B3 SINE B2 1 203 -13 8 958 425 329 126 49 chr17 48900701 48900945 -46371706 + B4A SINE B4 1 263 -29 8 958 1741 196 42 25 chr17 48900945 48901306 -46371345 - MTD LTR MaLR 0 419 53 8 958 1650 225 83 24 chr17 48901306 48901761 -46370890 + RLTR11A2 LTR ERVK 1 482 -45 8 958 313 181 20 24 chr17 48901762 48901845 -46370806 - MTD LTR MaLR -319 88 1 8 958 2588 96 11 6 chr17 48902452 48902808 -46369843 + RLTR15 LTR ERVK 2 359 0 8 958 320 111 0 18 chr17 48903556 48903611 -46369040 + (CA)n Simple_repeat Simple_repeat 2 55 0 8 958 529 278 21 7 chr17 48903611 48903756 -46368895 - RSINE1 SINE B4 -15 150 4 8 958 1519 91 87 0 chr17 48903953 48904161 -46368490 + URR1A DNA MER1_type 1 226 0 8 958 864 257 7 88 chr17 48904260 48904336 -46368315 - RMER5 LTR ERV1 -235 299 239 8 958 1298 113 11 5 chr17 48904336 48904523 -46368128 - B2_Mm2 SINE B2 -6 189 2 8 958 864 257 7 88 chr17 48904523 48904719 -46367932 - RMER5 LTR ERV1 -296 238 49 8 958 1709 26 0 0 chr17 48905414 48905607 -46367044 + B2_Mm1a SINE B2 1 193 0 8 958 250 286 26 13 chr17 48905773 48905851 -46366800 + MER5A1 DNA MER1_type 54 132 -34 8 958 248 231 237 21 chr17 48905882 48905975 -46366676 + MLT1A0 LTR MaLR 5 117 -248 8 958 296 368 29 7 chr17 48906004 48906141 -46366510 + MLT1A0 LTR MaLR 214 353 -12 8 958 314 154 13 0 chr17 48906234 48906312 -46366339 + CT-rich Low_complexity Low_complexity 2 80 0 8 958 384 222 43 22 chr17 48906466 48906558 -46366093 + RMER10A LTR ERVL 321 414 -28 8 958 21 0 0 0 chr17 48906707 48906728 -46365923 + AT_rich Low_complexity Low_complexity 1 21 0 8 958 1092 253 133 20 chr17 48907091 48907438 -46365213 + MTD LTR MaLR 18 403 -16 8 958 211 294 0 0 chr17 48907526 48907577 -46365074 + RSINE1 SINE B4 76 126 -39 8 958 1251 274 26 37 chr17 48909016 48909398 -46363253 - MTEa LTR MaLR -1 378 1 8 958 210 71 0 0 chr17 48909709 48909737 -46362914 + (AGGGGG)n Simple_repeat Simple_repeat 6 33 0 8 958 457 109 62 37 chr17 48910010 48910172 -46362479 + (TATATG)n Simple_repeat Simple_repeat 6 171 0 9 958 319 299 108 49 chr17 48910172 48910376 -46362275 - L1MC3 LINE L1 -1139 6646 6431 9 958 195 416 26 0 chr17 48910973 48911086 -46361565 + MIRb SINE MIR 121 236 -32 9 958 214 250 0 0 chr17 48911904 48911944 -46360707 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 958 713 294 90 54 chr17 48911951 48912228 -46360423 - B4A SINE B4 0 292 6 9 958 236 306 29 110 chr17 48912827 48912963 -46359688 - L2b LINE L2 -199 3176 3052 9 958 208 282 116 36 chr17 48913030 48913180 -46359471 + MIR SINE MIR 38 201 -7 9 958 326 338 13 46 chr17 48915042 48915194 -46357457 + RSINE1 SINE B4 2 148 -17 9 958 301 278 148 0 chr17 48915205 48915313 -46357338 + PB1 SINE Alu 4 127 0 9 958 498 46 0 0 chr17 48915502 48915567 -46357084 + (CA)n Simple_repeat Simple_repeat 2 66 0 9 958 230 250 0 30 chr17 48916083 48916149 -46356502 + C-rich Low_complexity Low_complexity 4 67 0 9 958 252 0 0 0 chr17 48916301 48916329 -46356322 + (TG)n Simple_repeat Simple_repeat 1 28 0 9 958 359 51 48 48 chr17 48916333 48916416 -46356235 + (CAGAGA)n Simple_repeat Simple_repeat 2 84 0 9 958 434 222 161 31 chr17 48916902 48917032 -46355619 + MLT2B2 LTR ERVL 2 148 -367 9 958 630 277 116 40 chr17 48917034 48917175 -46355476 + B3A SINE B2 7 157 -36 9 958 378 0 0 0 chr17 48917175 48917217 -46355434 + (CA)n Simple_repeat Simple_repeat 1 42 0 9 958 391 277 116 40 chr17 48917217 48917248 -46355403 + B2_Mm1a SINE B2 158 192 -1 9 958 180 0 0 0 chr17 48917264 48917284 -46355367 + (C)n Simple_repeat Simple_repeat 1 20 0 9 958 314 308 103 21 chr17 48917285 48917548 -46355103 + MLT2B2 LTR ERVL 148 500 -62 9 958 456 104 0 0 chr17 48917735 48917802 -46354849 + (TC)n Simple_repeat Simple_repeat 2 68 0 9 958 1025 67 15 0 chr17 48917805 48917940 -46354711 - B1_Mus2 SINE Alu 0 147 11 9 958 1776 247 35 30 chr17 48917939 48918398 -46354253 - RMER19C LTR ERVK -48 563 103 9 958 450 280 2 55 chr17 48918926 48919103 -46353548 + MIRc SINE MIR 31 196 -72 9 958 295 313 68 25 chr17 48919347 48919465 -46353186 + LTR16C LTR ERVL 365 487 -2 9 958 28 61 0 0 chr17 48919992 48920041 -46352610 + AT_rich Low_complexity Low_complexity 1 49 0 9 958 259 208 29 177 chr17 48920089 48920264 -46352387 - CR1_Mam LINE CR1 -1763 441 293 9 958 288 53 0 0 chr17 48920919 48920957 -46351694 + (CA)n Simple_repeat Simple_repeat 1 38 0 9 958 256 322 73 61 chr17 48922050 48922215 -46350436 - RLTR20A2 LTR ERVK -379 199 33 9 958 209 370 6 24 chr17 48922752 48922921 -46349730 + (CA)n Simple_repeat Simple_repeat 2 167 0 9 958 1894 184 65 5 chr17 48922934 48923305 -46349346 - MTD LTR MaLR -14 405 13 9 958 313 277 21 14 chr17 48923362 48923505 -46349146 + (CA)n Simple_repeat Simple_repeat 1 144 0 9 958 182 200 96 39 chr17 48923707 48923759 -46348892 + L2 LINE L2 70 124 -3295 9 958 1522 237 42 72 chr17 48924913 48925345 -46347306 - MTD LTR MaLR 0 419 1 9 958 689 266 19 0 chr17 48925429 48925587 -46347064 - RSINE1 SINE B4 -1 164 4 9 958 467 316 75 17 chr17 48926429 48926603 -46346048 - MT2A LTR ERVL -86 447 264 9 958 437 255 214 0 chr17 48926635 48926780 -46345871 - MTEa LTR MaLR -203 176 1 9 958 597 261 18 42 chr17 48927130 48927298 -46345353 - RSINE1 SINE B4 0 165 2 9 958 382 298 128 31 chr17 48927322 48927675 -46344976 + L1ME3A LINE L1 5727 6113 -60 9 958 546 224 98 65 chr17 48927715 48927868 -46344783 - RSINE1 SINE B4 -6 159 2 9 958 825 229 53 5 chr17 48927989 48928178 -46344473 + B3 SINE B2 1 198 -18 9 958 2744 70 96 11 chr17 48928178 48928553 -46344098 - MTB_Mm LTR MaLR 0 407 1 9 958 432 0 0 0 chr17 48928554 48928602 -46344049 + (TAAAA)n Simple_repeat Simple_repeat 5 52 0 9 958 217 49 98 0 chr17 48929095 48929136 -46343515 + (GGGGA)n Simple_repeat Simple_repeat 5 49 0 9 958 789 41 0 0 chr17 48929137 48929234 -46343417 + (GAGAA)n Simple_repeat Simple_repeat 1 97 0 9 958 243 0 0 0 chr17 48929689 48929716 -46342935 + (TG)n Simple_repeat Simple_repeat 1 27 0 9 958 411 123 0 0 chr17 48929716 48929797 -46342854 + (GA)n Simple_repeat Simple_repeat 2 82 0 9 958 284 307 42 42 chr17 48929803 48929922 -46342729 - B1_Mus2 SINE Alu -28 119 1 9 958 870 211 59 5 chr17 48929922 48930008 -46342643 - B4 SINE B4 -196 96 1 9 958 278 320 102 66 chr17 48930190 48930464 -46342187 + MLT1L LTR MaLR 208 491 -119 9 958 710 300 63 30 chr17 48930919 48931156 -46341495 - B4 SINE B4 -46 246 2 9 958 298 295 261 59 chr17 48931179 48931485 -46341166 - MLT1F LTR MaLR -180 368 1 9 958 498 322 7 13 chr17 48931909 48932060 -46340591 - MTEb LTR MaLR 0 379 230 9 958 187 250 0 104 chr17 48932356 48932423 -46340228 - L2c LINE L2 -37 3350 3291 9 958 369 0 0 0 chr17 48932485 48932526 -46340125 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 958 210 319 14 0 chr17 48932921 48932993 -46339658 + (CGTG)n Simple_repeat Simple_repeat 2 74 0 9 958 333 379 14 7 chr17 48933015 48933156 -46339495 + ID_B1 SINE B4 2 143 -81 9 958 387 192 0 14 chr17 48933103 48933177 -46339474 + PB1D7 SINE Alu 11 83 -37 9 958 329 176 14 0 chr17 48933214 48933288 -46339363 + (TG)n Simple_repeat Simple_repeat 2 76 0 9 958 492 204 24 89 chr17 48933494 48933618 -46339033 + PB1D7 SINE Alu 5 120 0 9 958 586 310 115 52 chr17 48933625 48933877 -46338774 + B4A SINE B4 14 281 -11 9 958 453 19 0 0 chr17 48933879 48933933 -46338718 + (CA)n Simple_repeat Simple_repeat 1 54 0 9 958 291 85 0 0 chr17 48933936 48933983 -46338668 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 9 958 1929 123 31 123 chr17 48933996 48934377 -46338274 - ORR1B1 LTR MaLR -8 386 41 9 958 308 282 11 45 chr17 48935960 48936049 -46336602 - L1MEg LINE L1 -4137 1947 1862 9 958 306 0 0 0 chr17 48936217 48936251 -46336400 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 9 958 213 255 0 18 chr17 48936377 48936433 -46336218 - PB1 SINE Alu -3 124 70 9 958 975 248 5 0 chr17 48936473 48936679 -46335972 - ID_B1 SINE B4 -15 209 3 9 958 469 338 26 13 chr17 48936781 48936934 -46335717 - B4A SINE B4 -4 288 134 9 958 823 250 6 6 chr17 48936927 48937104 -46335547 + ID_B1 SINE B4 33 209 -15 9 958 370 273 62 26 chr17 48937121 48937234 -46335417 - B4A SINE B4 -175 117 1 9 958 504 0 0 0 chr17 48938705 48938761 -46333890 + (TG)n Simple_repeat Simple_repeat 2 57 0 9 958 288 314 125 6 chr17 48939224 48939400 -46333251 + MIR SINE MIR 12 208 -54 9 958 249 178 13 40 chr17 48939432 48939447 -46333204 + polypyrimidine Low_complexity Low_complexity 62 76 0 9 958 1085 89 5 27 chr17 48939447 48939631 -46333020 + (TCC)n Simple_repeat Simple_repeat 1 180 0 9 958 249 178 13 40 chr17 48939631 48939691 -46332960 + CT-rich Low_complexity Low_complexity 3 61 0 9 958 181 164 48 16 chr17 48939692 48939754 -46332897 + (CACCAT)n Simple_repeat Simple_repeat 4 67 0 9 958 2035 109 89 49 chr17 48939872 48940220 -46332431 + ORR1B2 LTR MaLR 6 367 0 9 958 928 246 22 96 chr17 48940897 48941211 -46331440 - B4A SINE B4 0 292 2 9 958 241 234 20 40 chr17 48941225 48941376 -46331275 + (TGAA)n Simple_repeat Simple_repeat 3 150 0 9 958 373 160 22 82 chr17 48941391 48941575 -46331076 + (TGAA)n Simple_repeat Simple_repeat 3 175 0 9 958 206 121 0 0 chr17 48941640 48941673 -46330978 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 9 958 182 118 29 0 chr17 48942722 48942756 -46329895 + (CTG)n Simple_repeat Simple_repeat 1 35 0 9 958 1411 265 35 16 chr17 48943153 48943525 -46329126 - MTEa LTR MaLR 0 379 1 9 958 252 327 79 21 chr17 48943638 48943838 -46328813 - LTR33A_ LTR ERVL -151 380 144 9 958 480 311 67 55 chr17 48944169 48944407 -46328244 - ORR1E LTR MaLR -95 264 24 9 958 267 293 39 29 chr17 48944586 48944688 -46327963 - MLT1A LTR MaLR 0 408 306 9 958 1152 266 47 49 chr17 48944833 48945177 -46327474 + MTEa LTR MaLR 35 377 -2 9 958 397 301 7 83 chr17 48945185 48945330 -46327321 - MLT1A LTR MaLR -227 147 14 9 958 774 257 168 35 chr17 48945547 48945862 -46326789 - ORR1E LTR MaLR -2 357 1 9 958 1155 284 78 29 chr17 48946068 48946416 -46326235 + ORR1D2 LTR MaLR 1 365 -5 9 958 438 238 90 146 chr17 48946606 48946741 -46325910 - MTE2a LTR MaLR -178 201 60 9 958 878 192 132 29 chr17 48946741 48946945 -46325706 - URR1B DNA MER1_type 0 225 1 9 958 438 238 90 146 chr17 48946945 48947021 -46325630 - MTE2a LTR MaLR -320 59 2 9 958 225 232 36 0 chr17 48947021 48947077 -46325574 - MLT1A LTR MaLR -350 58 1 9 958 258 105 0 0 chr17 48947711 48947749 -46324902 + (T)n Simple_repeat Simple_repeat 1 38 0 9 958 678 286 158 71 chr17 48948152 48948633 -46324018 + MLT1F2 LTR MaLR 9 531 -29 9 958 337 199 29 44 chr17 48948730 48948867 -46323784 + (TATAA)n Simple_repeat Simple_repeat 5 139 0 9 958 296 195 45 19 chr17 48948880 48949037 -46323614 + (TA)n Simple_repeat Simple_repeat 1 161 0 9 958 213 39 0 0 chr17 48949140 48949166 -46323485 + (GGGA)n Simple_repeat Simple_repeat 4 29 0 9 958 966 291 19 11 chr17 48949173 48949441 -46323210 - B4A SINE B4 -21 271 2 9 958 476 291 99 22 chr17 48949501 48949713 -46322938 - MIR SINE MIR -16 252 31 9 958 1054 95 0 58 chr17 48949980 48950136 -46322515 + B1_Mus1 SINE Alu 1 147 -1 9 958 299 58 11 85 chr17 48950137 48950231 -46322420 + A-rich Low_complexity Low_complexity 4 90 0 9 958 658 257 16 97 chr17 48950241 48950426 -46322225 - ORR1E LTR MaLR -168 191 22 9 958 580 194 165 24 chr17 48950601 48950765 -46321886 - 7SK RNA RNA -88 243 57 9 958 459 0 0 0 chr17 48950899 48950950 -46321701 + (TG)n Simple_repeat Simple_repeat 1 51 0 9 958 264 326 74 0 chr17 48952393 48952488 -46320163 + ID_B1 SINE B4 2 103 -121 9 958 271 217 0 0 chr17 48952484 48952530 -46320121 + B1F2 SINE Alu 43 88 -61 1 958 1584 183 126 11 chr17 48952546 48952894 -46319757 - MTD LTR MaLR -14 405 18 1 958 303 241 43 65 chr17 48952869 48952962 -46319689 + B1_Mur1 SINE Alu 52 142 -7 1 958 641 251 138 108 chr17 48953164 48953414 -46319237 - MTD LTR MaLR 0 419 142 1 958 782 135 90 0 chr17 48953414 48953547 -46319104 + B1_Mus2 SINE Alu 3 147 0 1 958 641 251 138 108 chr17 48953547 48953693 -46318958 - MTD LTR MaLR -278 141 11 1 958 567 295 80 55 chr17 48953816 48953942 -46318709 + MLT1A0 LTR MaLR 116 238 -127 1 958 375 23 0 0 chr17 48953942 48953986 -46318665 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 958 567 295 80 55 chr17 48953986 48954096 -46318555 + MLT1A0 LTR MaLR 239 358 -7 1 958 730 259 48 24 chr17 48954577 48954783 -46317868 - ID_B1 SINE B4 -6 218 8 1 958 337 324 69 46 chr17 48954809 48955071 -46317580 - HAL1 LINE L1 -216 2291 2024 1 958 270 0 0 0 chr17 48956435 48956465 -46316186 + (CAG)n Simple_repeat Simple_repeat 1 30 0 1 958 824 249 95 123 chr17 48956813 48957138 -46315513 - MTEb LTR MaLR -63 316 1 1 958 553 312 20 56 chr17 48957188 48957385 -46315266 + LTR16B2 LTR ERVL 3 192 -270 1 958 645 175 17 17 chr17 48957520 48957694 -46314957 + CT-rich Low_complexity Low_complexity 3 176 0 1 958 910 191 162 17 chr17 48958237 48958471 -46314180 + RMER21A LTR ERV1 415 682 -265 1 958 1893 155 93 3 chr17 48958700 48959043 -46313608 + ORR1D1 LTR MaLR 1 374 0 1 958 212 312 78 0 chr17 48959054 48959131 -46313520 + MIRc SINE MIR 80 162 -106 1 958 225 271 255 0 chr17 48959535 48959647 -46313004 - L2a LINE L2 -18 3408 3221 1 958 678 236 149 17 chr17 48960206 48960447 -46312204 + B4 SINE B4 2 274 -18 1 958 435 92 0 0 chr17 48960470 48960535 -46312116 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 958 770 197 0 123 chr17 48961898 48962118 -46310533 - B3A SINE B2 -5 193 1 1 958 328 125 15 15 chr17 48962308 48962320 -46310331 + polypyrimidine Low_complexity Low_complexity 55 66 0 1 958 1044 114 11 6 chr17 48962320 48962497 -46310154 + (TCC)n Simple_repeat Simple_repeat 2 179 0 1 958 328 125 15 15 chr17 48962497 48962549 -46310102 + CT-rich Low_complexity Low_complexity 2 54 0 1 958 690 320 4 48 chr17 48962665 48962895 -46309756 + B4A SINE B4 73 292 0 1 958 231 36 0 0 chr17 48962948 48962976 -46309675 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 1 958 459 63 0 0 chr17 48964215 48964278 -46308373 + (TG)n Simple_repeat Simple_repeat 1 63 0 1 958 498 114 0 0 chr17 48964505 48964584 -46308067 + (CA)n Simple_repeat Simple_repeat 1 79 0 1 958 204 276 271 19 chr17 48964998 48965105 -46307546 + MIRb SINE MIR 18 151 -117 1 958 914 244 34 48 chr17 48965194 48965487 -46307164 + B4A SINE B4 4 292 0 1 958 487 206 12 0 chr17 48965487 48965647 -46307004 + (CA)n Simple_repeat Simple_repeat 1 162 0 1 958 273 167 0 0 chr17 48965690 48965744 -46306907 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 958 557 153 30 13 chr17 48965804 48966040 -46306611 + (CA)n Simple_repeat Simple_repeat 1 240 0 1 958 334 70 0 0 chr17 48966040 48966083 -46306568 + HAL1-3A_ME LINE L1 1977 2019 -839 1 958 1557 222 96 11 chr17 48966258 48966632 -46306019 - MTD LTR MaLR 0 419 14 1 958 194 282 67 75 chr17 48966680 48966814 -46305837 + L3 LINE CR1 4247 4379 -110 1 958 502 268 16 16 chr17 48967463 48967592 -46305059 + Lx8 LINE L1 7118 7246 -227 1 958 574 329 0 7 chr17 48967605 48967746 -46304905 - B4 SINE B4 -67 225 86 1 958 841 214 54 11 chr17 48967759 48967943 -46304708 - B3 SINE B2 0 216 25 1 958 729 213 0 0 chr17 48968196 48968370 -46304281 + (TA)n Simple_repeat Simple_repeat 2 175 0 1 958 475 327 6 30 chr17 48968412 48968579 -46304072 - RSINE1 SINE B4 0 165 3 1 958 995 292 36 44 chr17 48968778 48969178 -46303473 - MLT1A1 LTR MaLR -7 358 1 1 958 363 181 47 27 chr17 48969237 48969385 -46303266 + CT-rich Low_complexity Low_complexity 3 153 0 1 958 337 350 19 0 chr17 48969432 48969589 -46303062 + LTR33A LTR ERVL 352 511 -9 1 958 1242 118 34 0 chr17 48969965 48970143 -46302508 + URR1B DNA MER1_type 42 225 0 1 958 579 268 99 33 chr17 48971188 48971431 -46301220 + MER90a LTR ERV1 123 381 -233 1 958 1065 267 52 88 chr17 48971450 48971836 -46300815 - MTE2a LTR MaLR 0 379 8 1 958 233 262 32 106 chr17 48972080 48972174 -46300477 - MER5A1 DNA MER1_type -44 122 36 1 958 900 269 143 12 chr17 48973210 48973552 -46299099 + MLT1B LTR MaLR 4 390 0 1 958 773 241 107 26 chr17 48973831 48974065 -46298586 + ORR1D2 LTR MaLR 24 276 -94 1 958 359 236 43 125 chr17 48974169 48974315 -46298336 + ORR1D2 LTR MaLR 186 375 -9 1 958 602 260 91 25 chr17 48974544 48974741 -46297910 - LTR31 LTR ERV1 -12 607 398 1 958 455 318 62 45 chr17 48974724 48974902 -46297749 + B4A SINE B4 49 229 -63 1 958 647 255 10 77 chr17 48974904 48975112 -46297539 + B3A SINE B2 1 194 -4 1 958 887 163 0 21 chr17 48975144 48975288 -46297363 + B1_Mus2 SINE Alu 6 146 -1 1 958 211 240 0 20 chr17 48975348 48975399 -46297252 + (CATA)n Simple_repeat Simple_repeat 3 52 0 1 958 265 355 46 102 chr17 48975440 48975744 -46296907 - LTR31 LTR ERV1 -255 364 78 1 958 210 71 0 0 chr17 48975858 48975886 -46296765 + (CTG)n Simple_repeat Simple_repeat 1 28 0 1 958 198 0 0 0 chr17 48976066 48976088 -46296563 + (CAG)n Simple_repeat Simple_repeat 3 24 0 1 958 339 317 32 72 chr17 48977150 48977334 -46295317 - MIR SINE MIR -91 185 11 1 958 841 198 179 4 chr17 48978911 48979150 -46293501 - MTD LTR MaLR -14 405 131 1 958 315 0 0 0 chr17 48979157 48979192 -46293459 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1 958 26935 145 46 19 chr17 48979216 48981084 -46291567 - Lx3C LINE L1 -2 6974 5061 1 958 588 111 0 0 chr17 48981084 48981174 -46291477 + (CA)n Simple_repeat Simple_repeat 2 91 0 1 958 26935 147 32 12 chr17 48981174 48985323 -46287328 - Lx3C LINE L1 -826 5060 820 1 958 495 326 17 0 chr17 48985849 48986024 -46286627 - B3A SINE B2 -18 180 3 1 958 378 312 108 48 chr17 48986068 48986337 -46286314 + B4A SINE B4 2 274 -18 1 958 757 263 70 52 chr17 48986760 48987129 -46285522 - MTEa LTR MaLR 0 379 4 1 958 592 219 131 0 chr17 48987898 48987948 -46284703 - B4 SINE B4 -136 156 95 1 958 201 39 0 0 chr17 48987948 48987974 -46284677 + (CCA)n Simple_repeat Simple_repeat 1 26 0 1 958 592 219 131 0 chr17 48987974 48988060 -46284591 - B4 SINE B4 -198 94 3 1 958 1780 243 118 45 chr17 48988515 48989066 -46283585 - RMER20B LTR ERVK -15 612 22 1 958 316 350 68 55 chr17 48989081 48989309 -46283342 - MER102b DNA MER1_type -91 250 20 1 958 414 349 72 80 chr17 48989309 48989446 -46283205 - MLT1J LTR MaLR -2 510 373 1 958 2633 60 214 16 chr17 48989446 48989890 -46282761 - RLTR47_MM LTR ERV1 0 532 1 1 958 414 349 72 80 chr17 48989890 48990007 -46282644 - MLT1J LTR MaLR -140 372 260 1 958 1720 191 111 35 chr17 48990007 48990085 -46282566 - RLTR20B3 LTR ERVK 0 577 483 1 958 405 0 0 0 chr17 48990085 48990130 -46282521 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 958 1720 196 108 41 chr17 48990130 48990547 -46282104 - RLTR20B3 LTR ERVK -95 482 1 1 958 417 39 0 0 chr17 48990727 48990778 -46281873 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 958 342 206 0 60 chr17 48990796 48990863 -46281788 - ID4 SINE ID -1 82 20 1 958 267 284 0 31 chr17 48991029 48991127 -46281524 + CT-rich Low_complexity Low_complexity 3 97 0 1 958 780 206 122 21 chr17 48991134 48991322 -46281329 - B3 SINE B2 -6 210 4 1 958 501 17 0 0 chr17 48991323 48991381 -46281270 + (TCC)n Simple_repeat Simple_repeat 1 58 0 1 958 209 345 24 0 chr17 48991433 48991517 -46281134 + (CACCAT)n Simple_repeat Simple_repeat 4 89 0 1 958 496 282 36 60 chr17 48991520 48991686 -46280965 + HAL1-2a_MD LINE L1 2346 2507 -517 1 958 567 259 42 52 chr17 48992620 48992832 -46279819 + B3 SINE B2 1 210 -6 1 958 211 250 69 98 chr17 48992850 48992952 -46279699 + MIRm SINE MIR 82 180 -96 1 958 182 308 37 37 chr17 48992999 48993080 -46279571 - MIRb SINE MIR -73 195 115 1 958 193 253 211 0 chr17 48993736 48993831 -46278820 + L2c LINE L2 3271 3385 -2 1 958 263 262 12 12 chr17 48994165 48994246 -46278405 + CT-rich Low_complexity Low_complexity 2 82 0 1 958 396 322 115 28 chr17 48994310 48994562 -46278089 - RMER15 LTR ERVL -2 573 300 1 958 305 299 37 36 chr17 48994844 48994976 -46277675 + MLT1H2 LTR MaLR 380 546 -14 1 958 321 135 0 0 chr17 48995214 48995266 -46277385 + (TCC)n Simple_repeat Simple_repeat 3 54 0 1 958 996 9 0 0 chr17 48995710 48995823 -46276828 + (GA)n Simple_repeat Simple_repeat 2 114 0 1 958 2776 255 162 13 chr17 48996300 48997234 -46275417 - Lx6 LINE L1 -19 7441 6113 1 958 659 228 7 14 chr17 48997791 48997929 -46274722 + RSINE1 SINE B4 19 155 -10 1 958 30 0 0 0 chr17 48997946 48997976 -46274675 + AT_rich Low_complexity Low_complexity 1 30 0 1 958 426 241 27 18 chr17 48998748 48998858 -46273793 - B3A SINE B2 -16 182 72 1 958 217 291 32 120 chr17 48999359 48999484 -46273167 - PB1 SINE Alu -11 116 3 1 958 367 267 95 0 chr17 48999388 48999493 -46273158 - ID_B1 SINE B4 -36 188 74 1 958 414 0 0 0 chr17 48999493 48999539 -46273112 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 958 347 60 20 0 chr17 48999539 48999588 -46273063 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 958 425 206 10 61 chr17 48999588 48999686 -46272965 - B4A SINE B4 -23 269 177 1 958 1267 282 80 27 chr17 49000002 49000377 -46272274 - MTD LTR MaLR -23 396 2 1 958 250 326 46 21 chr17 49000387 49000521 -46272130 - MIRb SINE MIR -128 148 22 2 958 659 112 50 0 chr17 49001190 49001351 -46271300 + (TCTG)n Simple_repeat Simple_repeat 2 170 0 3 958 225 0 0 0 chr17 49001352 49001377 -46271274 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 958 1975 257 52 28 chr17 49001523 49002059 -46270592 - RMER15 LTR ERVL 0 575 27 5 958 1190 149 86 5 chr17 49002072 49002281 -46270370 + URR1A DNA MER1_type 1 226 0 6 958 239 268 18 0 chr17 49002300 49002356 -46270295 - RMER15 LTR ERVL -516 59 3 5 958 196 299 30 0 chr17 49002403 49002470 -46270181 - L2a LINE L2 -42 3384 3316 7 958 327 317 68 119 chr17 49002979 49003230 -46269421 + B4A SINE B4 53 290 -2 8 958 198 0 0 0 chr17 49003723 49003745 -46268906 + (TG)n Simple_repeat Simple_repeat 2 23 0 9 958 795 186 0 0 chr17 49003775 49003904 -46268747 - RSINE1 SINE B4 -36 129 1 1 958 341 270 35 35 chr17 49004809 49004924 -46267727 - MTEa LTR MaLR -11 368 254 1 958 2065 153 54 11 chr17 49004972 49005323 -46267328 + MTC LTR MaLR 56 421 0 1 958 268 340 18 54 chr17 49005323 49005430 -46267221 - MTEa LTR MaLR -188 182 80 1 958 294 292 11 33 chr17 49005497 49005589 -46267062 - MTEa LTR MaLR -269 110 21 1 958 236 284 0 29 chr17 49005654 49005723 -46266928 - MIR SINE MIR -104 104 38 1 958 294 283 73 32 chr17 49006388 49006512 -46266139 - MLT1L LTR MaLR -338 272 144 1 958 461 281 41 8 chr17 49006869 49006991 -46265660 + MIR SINE MIR 80 205 -57 1 958 21 0 0 0 chr17 49007083 49007104 -46265547 + AT_rich Low_complexity Low_complexity 1 21 0 1 958 302 323 0 50 chr17 49007119 49007220 -46265431 + L1MCa LINE L1 1901 1996 -4512 1 958 287 308 56 28 chr17 49007421 49007528 -46265123 - MLT1I LTR MaLR -2 409 300 1 958 633 157 0 0 chr17 49008262 49008377 -46264274 + (TG)n Simple_repeat Simple_repeat 1 115 0 1 958 306 340 68 14 chr17 49008392 49008538 -46264113 - MT2A LTR ERVL -132 401 248 2 958 474 292 7 52 chr17 49008606 49008761 -46263890 - MTEa LTR MaLR -231 148 1 2 958 432 0 0 0 chr17 49009258 49009306 -46263345 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 958 198 0 0 0 chr17 49009306 49009327 -46263324 + (CA)n Simple_repeat Simple_repeat 1 22 0 2 958 627 48 0 0 chr17 49009327 49009409 -46263242 + (GA)n Simple_repeat Simple_repeat 2 84 0 2 958 793 312 67 8 chr17 49010741 49010996 -46261655 + B4A SINE B4 5 274 -18 2 958 729 217 41 14 chr17 49011111 49011256 -46261395 + B1_Mur1 SINE Alu 1 149 0 2 958 228 187 108 19 chr17 49011374 49011532 -46261119 + RMER17C LTR ERVK 66 237 -173 2 958 288 0 0 0 chr17 49011532 49011564 -46261087 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 958 369 0 0 0 chr17 49011564 49011604 -46261047 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 958 1452 234 31 20 chr17 49011859 49012208 -46260443 + ORR1E LTR MaLR 5 357 -2 3 958 288 353 152 0 chr17 49012626 49012810 -46259841 + MER20 DNA MER1_type 8 219 0 3 958 272 169 188 24 chr17 49013299 49013384 -46259267 - PB1D7 SINE Alu 0 120 22 3 958 514 268 90 21 chr17 49014156 49014301 -46258350 + B4 SINE B4 11 165 -127 3 958 740 298 40 112 chr17 49014373 49014649 -46258002 + B4 SINE B4 1 256 -36 3 958 369 0 0 0 chr17 49014655 49014696 -46257955 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 958 280 263 76 26 chr17 49015135 49015282 -46257369 - MIR3 SINE MIR -46 162 8 3 958 203 327 18 0 chr17 49015987 49016042 -46256609 + MIRc SINE MIR 27 82 -186 3 958 468 35 0 0 chr17 49016062 49016120 -46256531 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 958 985 232 112 34 chr17 49016187 49016455 -46256196 - B4A SINE B4 0 292 4 3 958 676 321 112 6 chr17 49016737 49017100 -46255551 - Charlie1b DNA MER1_type -123 400 82 4 958 362 204 0 10 chr17 49017103 49017202 -46255449 + (TG)n Simple_repeat Simple_repeat 1 98 0 4 958 1118 210 114 0 chr17 49017202 49017464 -46255187 - B4A SINE B4 0 292 1 4 958 413 302 0 25 chr17 49017502 49017621 -46255030 - PB1D10 SINE Alu -1 116 1 4 958 356 298 131 42 chr17 49017949 49018163 -46254488 - MLT1L LTR MaLR -17 593 361 4 958 2116 116 3 59 chr17 49019611 49019949 -46252702 - ORR1A2 LTR MaLR -8 319 1 4 958 491 248 205 0 chr17 49020042 49020203 -46252448 - B3A SINE B2 -4 194 1 4 958 423 0 0 0 chr17 49020216 49020263 -46252388 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 958 535 221 0 0 chr17 49020381 49020476 -46252175 - B4A SINE B4 -4 288 194 4 958 242 335 7 13 chr17 49020705 49020856 -46251795 + (CATATA)n Simple_repeat Simple_repeat 3 152 0 4 958 392 337 12 6 chr17 49020829 49020890 -46251761 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 958 195 42 0 0 chr17 49020890 49020914 -46251737 + (CATG)n Simple_repeat Simple_repeat 3 26 0 5 119 392 337 12 6 chr17 49020914 49021025 -46251626 + (CA)n Simple_repeat Simple_repeat 1 112 0 5 959 398 316 0 28 chr17 49020970 49021152 -46251499 + (CATA)n Simple_repeat Simple_repeat 2 178 0 5 959 251 284 40 0 chr17 49021107 49021181 -46251470 + (CATG)n Simple_repeat Simple_repeat 2 78 0 5 959 221 305 49 0 chr17 49021289 49021371 -46251280 - L2a LINE L2 -3 3423 3338 5 959 709 289 26 139 chr17 49023977 49024250 -46248401 - B4A SINE B4 -48 244 3 5 959 396 0 0 0 chr17 49024350 49024394 -46248257 + (T)n Simple_repeat Simple_repeat 1 44 0 5 959 351 0 0 0 chr17 49025116 49025155 -46247496 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 959 250 227 244 39 chr17 49025304 49025382 -46247269 + PB1D7 SINE Alu 18 111 -9 5 959 2386 75 27 51 chr17 49025395 49025730 -46246921 + ORR1A2 LTR MaLR 1 327 0 6 959 1846 188 103 3 chr17 49025770 49026148 -46246503 - MTD LTR MaLR -3 416 1 6 959 835 80 16 0 chr17 49026778 49026903 -46245748 + (TC)n Simple_repeat Simple_repeat 2 128 0 6 959 546 269 78 93 chr17 49028192 49028385 -46244266 - B3A SINE B2 -7 191 2 6 959 987 269 95 8 chr17 49028946 49029208 -46243443 - B4A SINE B4 0 292 8 6 959 738 271 71 34 chr17 49029214 49029280 -46243371 - L1M5 LINE L1 -466 5707 5645 6 959 1959 196 70 25 chr17 49029280 49029683 -46242968 + MTC LTR MaLR 1 421 0 6 959 738 271 71 34 chr17 49029683 49029968 -46242683 - L1M5 LINE L1 -529 5644 5344 6 959 184 216 75 38 chr17 49029983 49030036 -46242615 + MER5B DNA MER1_type 112 166 -12 6 959 513 0 0 0 chr17 49030124 49030181 -46242470 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 959 351 325 64 29 chr17 49031343 49031514 -46241137 + HAL1-2a_MD LINE L1 2341 2517 -507 6 959 317 259 0 45 chr17 49031880 49031969 -46240682 - MLT1A1 LTR MaLR -4 404 320 7 959 937 309 20 171 chr17 49032189 49032634 -46240017 - MTD LTR MaLR -1 378 1 7 959 559 325 16 52 chr17 49033226 49033294 -46239357 - B3A SINE B2 -3 213 154 7 959 324 0 0 0 chr17 49033294 49033330 -46239321 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 959 559 321 20 40 chr17 49033330 49033488 -46239163 - B3A SINE B2 -42 156 1 7 959 677 291 60 28 chr17 49033488 49033711 -46238940 - B4A SINE B4 -61 231 1 7 959 356 231 71 71 chr17 49033727 49033825 -46238826 - PB1D9 SINE Alu -13 107 10 7 959 569 335 72 4 chr17 49033928 49034207 -46238444 + L1ME2z LINE L1 2606 2903 -3243 7 959 763 255 9 80 chr17 49034228 49034441 -46238210 + B3A SINE B2 1 198 0 7 959 251 257 94 9 chr17 49034507 49034613 -46238038 + L1MC LINE L1 2940 3054 -3092 7 959 324 296 208 35 chr17 49034726 49034956 -46237695 + B4 SINE B4 24 292 0 7 959 429 66 0 0 chr17 49034961 49035022 -46237629 + (CAGA)n Simple_repeat Simple_repeat 4 64 0 8 959 296 323 10 0 chr17 49035079 49035178 -46237473 + L1M3 LINE L1 3484 3583 -2557 8 959 355 338 98 81 chr17 49035198 49035546 -46237105 + MLT1A LTR MaLR 21 374 0 8 959 432 0 0 0 chr17 49035629 49035677 -46236974 + (GAAA)n Simple_repeat Simple_repeat 1 48 0 8 959 954 26 0 0 chr17 49035678 49035791 -46236860 + (GGAAA)n Simple_repeat Simple_repeat 4 116 0 8 959 333 68 0 0 chr17 49035793 49035837 -46236814 + (GGGGA)n Simple_repeat Simple_repeat 1 44 0 8 959 354 317 28 36 chr17 49035957 49036209 -46236442 + L1ME2z LINE L1 3818 4067 -2079 7 959 241 254 0 45 chr17 49036209 49036275 -46236376 - LTR40a LTR ERVL 0 462 400 8 959 261 0 0 0 chr17 49036379 49036408 -46236243 + (A)n Simple_repeat Simple_repeat 1 29 0 8 959 185 94 0 30 chr17 49036538 49036571 -46236080 + (GGGGA)n Simple_repeat Simple_repeat 2 33 0 8 959 246 333 29 29 chr17 49036587 49036689 -46235962 - MLT1A LTR MaLR -240 134 33 8 959 449 309 147 44 chr17 49036758 49037150 -46235501 - LTR40a LTR ERVL -71 394 5 8 959 887 200 0 109 chr17 49037178 49037380 -46235271 + B3A SINE B2 3 182 -16 9 959 416 282 128 78 chr17 49037410 49037629 -46235022 + L1MD LINE L1 4068 4297 -1849 9 959 339 296 89 59 chr17 49037716 49037885 -46234766 + L1ME2z LINE L1 4419 4592 -1554 7 959 289 289 22 117 chr17 49037886 49038023 -46234628 + RSINE1 SINE B4 42 165 0 9 959 299 229 12 12 chr17 49038211 49038295 -46234356 + L1MD LINE L1 4750 4833 -1313 9 959 635 283 26 35 chr17 49038402 49038783 -46233868 + L1ME2z LINE L1 5050 5431 -1013 7 959 741 233 0 0 chr17 49038792 49038938 -46233713 + ID_B1 SINE B4 79 224 0 9 959 292 267 124 44 chr17 49038815 49038952 -46233699 - YREP_Mm Unknown Unknown -1516 296 149 9 959 513 263 14 70 chr17 49038976 49039119 -46233532 + RSINE1 SINE B4 30 164 -1 9 959 280 299 66 71 chr17 49039143 49039341 -46233310 + L1ME2z LINE L1 5417 5613 -566 7 959 1089 241 105 37 chr17 49039349 49039687 -46232964 - MTD LTR MaLR -14 405 46 9 959 464 229 20 40 chr17 49039691 49039791 -46232860 + RMER20B LTR ERVK 1 98 -529 9 959 201 74 0 0 chr17 49039791 49039818 -46232833 + (TCTCTG)n Simple_repeat Simple_repeat 4 30 0 9 959 294 328 59 7 chr17 49040251 49040386 -46232265 + L1ME2z LINE L1 5692 5833 -611 7 959 1869 231 68 33 chr17 49040443 49040480 -46232171 - RLTR20B3 LTR ERVK -56 521 485 1 959 228 35 0 0 chr17 49040480 49040509 -46232142 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 959 1869 231 68 33 chr17 49040509 49040955 -46231696 - RLTR20B3 LTR ERVK -93 484 23 1 959 180 0 0 0 chr17 49040972 49040992 -46231659 + (A)n Simple_repeat Simple_repeat 1 20 0 1 959 453 312 25 49 chr17 49041132 49041499 -46231152 + L1ME2z LINE L1 6085 6442 -2 7 959 182 231 0 0 chr17 49041539 49041578 -46231073 - L4 LINE RTE -1866 163 125 1 959 1003 293 139 6 chr17 49041684 49042007 -46230644 - MTD LTR MaLR -4 415 50 1 959 364 133 40 32 chr17 49042436 49042560 -46230091 + (CAGAGA)n Simple_repeat Simple_repeat 2 126 0 1 959 865 208 6 12 chr17 49042623 49042784 -46229867 + B3A SINE B2 1 160 -38 1 959 335 23 0 22 chr17 49042784 49042829 -46229822 + (TC)n Simple_repeat Simple_repeat 1 44 0 1 959 468 122 0 0 chr17 49042829 49042910 -46229741 + (CA)n Simple_repeat Simple_repeat 1 82 0 1 959 788 230 32 50 chr17 49042910 49042967 -46229684 + B3 SINE B2 160 214 -2 1 959 979 263 2 38 chr17 49044704 49044968 -46227683 - MTD LTR MaLR -148 271 18 1 959 228 241 19 0 chr17 49045878 49045932 -46226719 + GA-rich Low_complexity Low_complexity 2 56 0 1 959 453 36 0 0 chr17 49045932 49045987 -46226664 + (AGGGGG)n Simple_repeat Simple_repeat 3 57 0 1 959 206 310 0 35 chr17 49045987 49046027 -46226624 + polypurine Low_complexity Low_complexity 50 88 0 1 959 201 139 0 0 chr17 49046111 49046154 -46226497 + (CAAAAA)n Simple_repeat Simple_repeat 5 47 0 1 959 285 247 44 56 chr17 49047050 49047140 -46225511 + MIR SINE MIR 161 249 -13 1 959 309 304 25 42 chr17 49047747 49047867 -46224784 - ID_B1 SINE B4 -104 120 3 1 959 674 54 26 9 chr17 49047955 49048068 -46224583 + (TCCA)n Simple_repeat Simple_repeat 3 117 0 1 959 447 19 0 0 chr17 49048371 49048423 -46224228 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 959 1209 106 0 0 chr17 49048500 49048680 -46223971 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 959 807 291 66 18 chr17 49049097 49049370 -46223281 - B4A SINE B4 0 292 7 1 959 531 0 0 0 chr17 49049854 49049913 -46222738 + (GA)n Simple_repeat Simple_repeat 1 59 0 1 959 228 86 0 0 chr17 49050310 49050345 -46222306 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 959 878 227 55 40 chr17 49050588 49050790 -46221861 - B3 SINE B2 -11 205 1 1 959 548 327 19 0 chr17 49050910 49051069 -46221582 + MTE2b LTR MaLR 2 163 -216 1 959 295 306 0 0 chr17 49051069 49051141 -46221510 + MTE2b LTR MaLR 92 163 -216 1 959 281 319 0 0 chr17 49051141 49051213 -46221438 + MTE2b LTR MaLR 92 163 -216 1 959 1198 257 11 11 chr17 49051216 49051499 -46221152 + MTEb LTR MaLR 94 376 -3 1 959 188 308 43 21 chr17 49052794 49052887 -46219764 + MIR3 SINE MIR 93 187 -21 1 959 1032 271 102 0 chr17 49053515 49053759 -46218892 + B4A SINE B4 1 269 -23 1 959 465 66 0 0 chr17 49053767 49053828 -46218823 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 959 508 337 73 75 chr17 49053839 49054135 -46218516 - LTR16C LTR ERVL -112 426 71 1 959 838 242 50 10 chr17 49056117 49056317 -46216334 - ID_B1 SINE B4 -16 208 1 1 959 678 314 41 5 chr17 49058486 49058707 -46213944 + B4A SINE B4 2 230 -62 1 959 406 257 97 0 chr17 49058708 49058821 -46213830 + RSINE1 SINE B4 4 127 -38 1 959 312 254 0 0 chr17 49058903 49058974 -46213677 + B4A SINE B4 218 288 -4 1 959 527 322 93 44 chr17 49059602 49059872 -46212779 + B4A SINE B4 8 290 -2 1 959 842 132 12 18 chr17 49059878 49060048 -46212603 + GA-rich Low_complexity Low_complexity 4 172 0 1 959 307 354 39 25 chr17 49061021 49061224 -46211427 + L1MA5 LINE L1 6068 6273 -27 1 959 252 143 0 0 chr17 49061416 49061458 -46211193 + (TCCA)n Simple_repeat Simple_repeat 3 44 0 1 959 291 140 0 0 chr17 49061452 49061502 -46211149 + (TCTCCC)n Simple_repeat Simple_repeat 3 52 0 1 959 567 0 0 0 chr17 49061502 49061565 -46211086 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 959 711 266 52 14 chr17 49061565 49061775 -46210876 - B4 SINE B4 -23 269 52 1 959 678 277 105 52 chr17 49062726 49062993 -46209658 - B4A SINE B4 -4 288 8 1 959 641 237 0 0 chr17 49063313 49063444 -46209207 - ID_B1 SINE B4 0 224 94 1 959 458 276 63 0 chr17 49063913 49064040 -46208611 - B3 SINE B2 0 216 82 1 959 2128 179 111 27 chr17 49064049 49064527 -46208124 + RLTR11A2 LTR ERVK 10 527 0 1 959 393 191 24 0 chr17 49064528 49064612 -46208039 - B2_Mm2 SINE B2 -109 86 1 1 959 361 345 131 11 chr17 49065410 49065586 -46207065 - B4 SINE B4 -82 210 14 1 959 289 204 42 11 chr17 49065629 49065715 -46206936 - MIR SINE MIR -105 171 84 1 959 979 210 14 14 chr17 49066005 49066213 -46206438 + B3 SINE B2 4 211 -5 1 959 1032 248 73 7 chr17 49067058 49067122 -46205529 - B4 SINE B4 -2 290 226 1 959 558 0 0 0 chr17 49067122 49067184 -46205467 + (TTCC)n Simple_repeat Simple_repeat 4 65 0 1 959 1032 248 73 7 chr17 49067184 49067391 -46205260 - B4 SINE B4 -67 225 1 1 959 191 309 63 11 chr17 49067565 49067660 -46204991 - L3b LINE CR1 -209 273 174 1 959 293 263 89 73 chr17 49068673 49068796 -46203855 + RMER15 LTR ERVL 451 575 0 1 959 357 24 0 0 chr17 49071519 49071561 -46201090 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 959 261 0 0 0 chr17 49071561 49071589 -46201062 + (GA)n Simple_repeat Simple_repeat 1 29 0 1 959 279 0 0 0 chr17 49071686 49071717 -46200934 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 959 498 46 0 0 chr17 49072952 49073017 -46199634 + (GA)n Simple_repeat Simple_repeat 1 65 0 1 959 385 33 32 32 chr17 49073199 49073262 -46199389 + (TCTG)n Simple_repeat Simple_repeat 4 66 0 1 959 423 56 0 0 chr17 49074399 49074453 -46198198 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 959 194 0 39 0 chr17 49075093 49075119 -46197532 + (CCCA)n Simple_repeat Simple_repeat 1 27 0 1 959 286 341 67 76 chr17 49075750 49075988 -46196663 - MER106B DNA MER1_type 0 1059 900 1 959 539 323 30 0 chr17 49076910 49077111 -46195540 + ID_B1 SINE B4 2 208 -16 1 959 300 215 0 30 chr17 49078007 49078074 -46194577 - B1_Mur3 SINE Alu -36 113 49 1 959 248 156 42 99 chr17 49078019 49078090 -46194561 - MT2B LTR ERVL -347 254 188 1 959 368 261 41 57 chr17 49079068 49079190 -46193461 - PB1D7 SINE Alu 0 120 1 1 959 833 54 9 0 chr17 49079588 49079699 -46192952 + (TG)n Simple_repeat Simple_repeat 1 112 0 1 959 572 263 17 33 chr17 49079852 49080033 -46192618 - HAL1-2a_MD LINE L1 -505 2519 2342 1 959 241 133 50 0 chr17 49080043 49080103 -46192548 + (ATGGTG)n Simple_repeat Simple_repeat 6 68 0 1 959 356 290 51 51 chr17 49080113 49080309 -46192342 - HAL1-2a_MD LINE L1 -503 2521 2326 1 959 498 292 65 7 chr17 49080955 49081110 -46191541 + MIR SINE MIR 70 233 -29 1 959 216 158 0 0 chr17 49081384 49081422 -46191229 + (CAT)n Simple_repeat Simple_repeat 2 39 0 1 959 1911 222 20 2 chr17 49082038 49082436 -46190215 + MTD LTR MaLR 1 405 -14 1 959 236 54 54 0 chr17 49082780 49082817 -46189834 + (CCCCCT)n Simple_repeat Simple_repeat 6 44 0 1 959 213 278 40 27 chr17 49083022 49083096 -46189555 - MIRc SINE MIR -107 161 87 1 959 535 144 9 9 chr17 49083174 49083286 -46189365 + CT-rich Low_complexity Low_complexity 2 113 0 1 959 837 207 0 0 chr17 49083288 49083563 -46189088 + (TG)n Simple_repeat Simple_repeat 1 275 0 1 959 1011 264 21 38 chr17 49083566 49083854 -46188797 - B4 SINE B4 0 292 10 1 959 283 253 43 21 chr17 49083925 49084018 -46188633 - MIR SINE MIR -122 140 46 1 959 185 234 98 61 chr17 49084162 49084244 -46188407 + MIRc SINE MIR 88 172 -96 1 959 952 246 74 122 chr17 49084551 49084691 -46187960 - MTEa LTR MaLR -44 335 177 1 959 2632 38 38 0 chr17 49084691 49085030 -46187621 - L1_Mus1 LINE L1 0 6567 6216 1 959 952 246 74 122 chr17 49085030 49085241 -46187410 - MTEa LTR MaLR -203 176 1 1 959 281 275 31 20 chr17 49085574 49085676 -46186975 - MIRc SINE MIR -116 152 44 1 959 186 318 102 75 chr17 49086424 49086611 -46186040 - MIR SINE MIR -29 233 42 1 959 414 277 94 39 chr17 49086686 49086889 -46185762 + Lx8 LINE L1 7003 7348 -296 1 959 240 333 63 27 chr17 49086868 49086979 -46185672 + Lx8 LINE L1 7207 7321 -152 1 959 324 111 0 0 chr17 49087012 49087066 -46185585 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 959 284 288 8 33 chr17 49088338 49088460 -46184191 + L2c LINE L2 3023 3141 -246 1 959 548 283 13 26 chr17 49088643 49088799 -46183852 + MIR SINE MIR 109 262 0 1 959 207 182 236 0 chr17 49088804 49088859 -46183792 + L2a LINE L2 3357 3424 -2 1 959 245 309 84 28 chr17 49088921 49089064 -46183587 - MER5B DNA MER1_type -25 153 3 1 959 477 284 65 118 chr17 49089942 49090272 -46182379 + MTEa LTR MaLR 1 375 -4 1 959 269 239 51 61 chr17 49090291 49090361 -46182290 + MIRc SINE MIR 56 126 -142 1 959 813 267 49 78 chr17 49090361 49090747 -46181904 + MTE2a LTR MaLR 5 379 0 1 959 269 239 51 61 chr17 49090747 49090774 -46181877 + MIRc SINE MIR 127 152 -116 1 959 905 261 14 5 chr17 49091065 49091281 -46181370 - ID_B1 SINE B4 0 224 7 1 959 333 0 0 0 chr17 49094076 49094113 -46178538 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 959 351 0 0 0 chr17 49094113 49094152 -46178499 + (GA)n Simple_repeat Simple_repeat 1 39 0 1 959 1229 234 14 34 chr17 49095006 49095298 -46177353 + B4 SINE B4 5 290 -2 1 959 289 243 19 24 chr17 49095455 49095548 -46177103 - Charlie9 DNA MER1_type -2646 111 22 1 959 189 0 0 0 chr17 49096491 49096512 -46176139 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 959 342 0 0 0 chr17 49096682 49096720 -46175931 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 959 801 30 0 0 chr17 49096720 49096819 -46175832 + (GA)n Simple_repeat Simple_repeat 2 101 0 1 959 315 0 0 0 chr17 49098316 49098351 -46174300 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 959 807 230 27 36 chr17 49098439 49098660 -46173991 - ID_B1 SINE B4 0 224 6 2 959 183 20 0 121 chr17 49098865 49098923 -46173728 + (TGGGGG)n Simple_repeat Simple_repeat 2 52 0 2 959 252 143 0 67 chr17 49099757 49099832 -46172819 + (CGGGG)n Simple_repeat Simple_repeat 5 74 0 2 959 1173 45 0 26 chr17 49100651 49100881 -46171770 + (TAGA)n Simple_repeat Simple_repeat 1 223 0 2 959 233 98 0 24 chr17 49101009 49101051 -46171600 + (TCCA)n Simple_repeat Simple_repeat 3 43 0 2 959 225 0 0 0 chr17 49101734 49101759 -46170892 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 959 351 0 0 0 chr17 49101759 49101797 -46170854 + (GA)n Simple_repeat Simple_repeat 2 40 0 2 959 26 0 0 0 chr17 49101810 49101836 -46170815 + AT_rich Low_complexity Low_complexity 1 26 0 2 959 291 54 0 0 chr17 49102463 49102500 -46170151 + (TCTG)n Simple_repeat Simple_repeat 4 40 0 2 959 27 0 0 0 chr17 49102584 49102611 -46170040 + AT_rich Low_complexity Low_complexity 1 27 0 2 959 392 248 147 14 chr17 49102624 49102767 -46169884 - RSINE1 SINE B4 0 165 4 2 959 851 234 83 49 chr17 49103045 49103310 -46169341 - ORR1E LTR MaLR -2 357 84 2 959 221 30 61 0 chr17 49103731 49103764 -46168887 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 2 959 675 253 35 58 chr17 49103779 49103951 -46168700 - B3A SINE B2 -30 168 1 2 959 481 261 120 79 chr17 49103953 49104169 -46168482 - B4A SINE B4 -67 225 1 2 959 635 256 11 31 chr17 49104765 49104939 -46167712 + B3 SINE B2 1 179 -19 2 959 374 0 22 0 chr17 49104939 49104985 -46167666 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 959 599 301 47 21 chr17 49104985 49105003 -46167648 + B3A SINE B2 180 197 -1 2 959 243 0 0 0 chr17 49105007 49105034 -46167617 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 959 930 93 0 0 chr17 49105034 49105163 -46167488 - B1_Mus1 SINE Alu -10 138 10 2 959 525 368 98 26 chr17 49105791 49106137 -46166514 - MLT1J-int LTR MaLR -467 920 550 2 959 1377 234 80 5 chr17 49106572 49106957 -46165694 + MTD LTR MaLR 3 401 -18 2 959 250 266 16 0 chr17 49107128 49107192 -46165459 - MER91B DNA Tip100 -65 125 61 2 959 685 291 11 5 chr17 49107440 49107630 -46165021 - B3A SINE B2 -7 191 1 2 959 376 307 71 13 chr17 49108268 49108423 -46164228 - LTR33 LTR ERVL -4 511 348 2 959 229 228 43 26 chr17 49108808 49108925 -46163726 + (TTTA)n Simple_repeat Simple_repeat 1 119 0 2 959 332 231 132 0 chr17 49109169 49109260 -46163391 - PB1D7 SINE Alu -17 103 1 2 959 242 200 40 67 chr17 49109802 49109877 -46162774 + B4 SINE B4 14 86 -206 2 959 323 284 0 33 chr17 49110073 49110164 -46162487 + GA-rich Low_complexity Low_complexity 1 88 0 2 959 213 275 7 90 chr17 49110311 49110455 -46162196 + CT-rich Low_complexity Low_complexity 6 137 0 2 959 2257 161 67 86 chr17 49110460 49110971 -46161680 - RLTR24 LTR ERV1 0 529 29 2 959 431 134 12 0 chr17 49111380 49111462 -46161189 + (GA)n Simple_repeat Simple_repeat 1 83 0 2 959 894 135 11 6 chr17 49111465 49111644 -46161007 + GA-rich Low_complexity Low_complexity 1 180 0 2 959 406 306 81 5 chr17 49111655 49111875 -46160776 - MIRb SINE MIR -15 253 14 2 959 378 0 0 0 chr17 49111984 49112026 -46160625 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 959 1677 184 59 29 chr17 49112076 49112450 -46160201 - RLTR41 LTR ERV1 0 446 62 2 959 554 188 180 0 chr17 49112482 49112610 -46160041 - B4 SINE B4 -46 246 96 2 959 272 182 0 18 chr17 49113334 49113390 -46159261 + B3A SINE B2 1 55 -143 2 959 993 142 0 0 chr17 49113396 49113669 -46158982 + (CA)n Simple_repeat Simple_repeat 1 273 0 2 959 323 277 19 19 chr17 49113671 49113774 -46158877 + HAL1-3A_ME LINE L1 1975 2077 -781 2 959 320 0 25 0 chr17 49114026 49114066 -46158585 + (TAAAA)n Simple_repeat Simple_repeat 2 42 0 2 959 1100 38 0 0 chr17 49115181 49115314 -46157337 + B1_Mus1 SINE Alu 1 133 -15 2 959 345 262 34 8 chr17 49115717 49115959 -46156692 + CT-rich Low_complexity Low_complexity 1 248 0 2 959 279 0 0 0 chr17 49116339 49116370 -46156281 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 959 351 0 0 0 chr17 49116370 49116408 -46156243 + (GA)n Simple_repeat Simple_repeat 2 40 0 2 959 459 283 91 87 chr17 49116615 49116890 -46155761 - B4A SINE B4 -16 276 1 2 959 834 291 14 14 chr17 49118138 49118354 -46154297 - ID_B1 SINE B4 -6 218 3 2 959 674 250 92 27 chr17 49118762 49118947 -46153704 - B3 SINE B2 -5 211 15 2 959 189 301 32 21 chr17 49119323 49119418 -46153233 + L3b LINE CR1 29 124 -358 2 959 21 57 0 0 chr17 49119803 49119838 -46152813 + AT_rich Low_complexity Low_complexity 1 35 0 2 959 629 166 15 11 chr17 49119894 49120170 -46152481 + (TG)n Simple_repeat Simple_repeat 1 277 0 2 959 653 136 19 7 chr17 49120217 49120372 -46152279 + (TG)n Simple_repeat Simple_repeat 2 158 0 2 959 456 267 192 5 chr17 49120415 49120623 -46152028 - B4 SINE B4 -44 248 2 2 959 1062 164 101 0 chr17 49121928 49122136 -46150515 - RLTR42 LTR ERVK -10 229 1 2 959 7581 179 68 48 chr17 49122136 49124554 -46148097 - RLTR42-int LTR ERVK 0 5522 3057 2 959 1144 132 21 80 chr17 49124554 49124792 -46147859 - URR1A DNA MER1_type 0 226 3 2 959 869 211 65 5 chr17 49124792 49124992 -46147659 - RLTR42-int LTR ERVK -2488 3034 2823 2 959 10230 180 68 125 chr17 49124966 49126978 -46145673 - RLTR42-int LTR ERVK -2527 2995 1169 2 959 1016 97 28 6 chr17 49126978 49127154 -46145497 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 2 959 688 196 7 40 chr17 49127163 49127312 -46145339 - B1_Mus2 SINE Alu -1 146 3 2 959 10230 180 68 125 chr17 49127312 49128348 -46144303 - RLTR42-int LTR ERVK -4354 1168 111 2 959 1292 181 22 0 chr17 49128435 49128667 -46143984 - RLTR42 LTR ERVK 0 239 3 2 959 721 264 18 45 chr17 49128941 49129163 -46143488 - B3 SINE B2 0 216 1 2 959 757 256 159 8 chr17 49129286 49129538 -46143113 + B4A SINE B4 3 292 0 2 959 271 331 20 61 chr17 49129846 49129994 -46142657 + MER2 DNA MER2_type 99 240 -105 2 959 542 234 26 119 chr17 49130010 49130204 -46142447 + ORR1E LTR MaLR 7 182 -177 2 959 438 276 0 0 chr17 49130340 49130503 -46142148 + (TG)n Simple_repeat Simple_repeat 1 163 0 2 959 217 283 0 0 chr17 49130506 49130552 -46142099 + (CGTG)n Simple_repeat Simple_repeat 4 49 0 2 959 599 262 18 18 chr17 49130553 49130716 -46141935 - RSINE1 SINE B4 0 165 3 2 959 22 0 0 0 chr17 49130950 49130972 -46141679 + AT_rich Low_complexity Low_complexity 1 22 0 2 959 1761 184 39 6 chr17 49131066 49131422 -46141229 + ORR1D1 LTR MaLR 7 374 0 2 959 399 41 0 0 chr17 49132550 49132599 -46140052 + (ATG)n Simple_repeat Simple_repeat 2 50 0 2 959 373 322 16 0 chr17 49132968 49133089 -46139562 - MER2 DNA MER2_type -12 333 211 2 959 284 260 146 0 chr17 49133090 49133186 -46139465 + RSINE1 SINE B4 18 127 -38 2 959 24 32 0 0 chr17 49133212 49133243 -46139408 + AT_rich Low_complexity Low_complexity 1 31 0 2 959 447 19 0 0 chr17 49133605 49133657 -46138994 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 959 297 376 35 0 chr17 49134341 49134482 -46138169 + MIRb SINE MIR 35 180 -88 2 959 268 20 39 20 chr17 49134496 49134547 -46138104 + L1Md_T LINE L1 6531 6582 0 2 959 1046 269 132 20 chr17 49135282 49135631 -46137020 + MTD LTR MaLR 18 405 -14 2 959 1046 75 0 0 chr17 49135641 49135775 -46136876 + B1_Mus1 SINE Alu 2 135 -13 2 959 198 0 0 0 chr17 49135780 49135802 -46136849 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 2 959 412 282 8 126 chr17 49136182 49136421 -46136230 - B3A SINE B2 -4 212 2 2 959 240 328 31 85 chr17 49136534 49136664 -46135987 - MTEa LTR MaLR -254 125 3 2 959 378 305 29 34 chr17 49136666 49136820 -46135831 + MIRb SINE MIR 15 174 -94 2 959 368 179 63 13 chr17 49137216 49137295 -46135356 + MIRc SINE MIR 39 121 -147 2 959 261 139 0 0 chr17 49137470 49137513 -46135138 + (CTG)n Simple_repeat Simple_repeat 2 44 0 2 959 227 173 12 36 chr17 49137577 49137661 -46134990 + CT-rich Low_complexity Low_complexity 3 84 0 2 959 1010 288 97 31 chr17 49137732 49138184 -46134467 - Lx8 LINE L1 -97 7376 6895 2 959 406 274 112 104 chr17 49139586 49139855 -46132796 + B4A SINE B4 4 274 -18 2 959 958 256 108 23 chr17 49139933 49140277 -46132374 - RMER5 LTR ERV1 -50 484 112 2 959 657 125 0 0 chr17 49140333 49140453 -46132198 + (TC)n Simple_repeat Simple_repeat 2 121 0 2 959 396 0 0 0 chr17 49140674 49140718 -46131933 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 959 693 36 0 0 chr17 49140900 49140984 -46131667 + (TC)n Simple_repeat Simple_repeat 1 84 0 2 959 186 43 0 0 chr17 49140984 49141006 -46131645 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 959 552 262 0 46 chr17 49141081 49141233 -46131418 + ID_B1 SINE B4 79 223 -1 2 959 206 250 39 0 chr17 49142048 49142100 -46130551 - MIR SINE MIR -10 252 199 2 959 1995 149 28 97 chr17 49142159 49142582 -46130069 - ORR1B1 LTR MaLR 0 394 1 2 959 588 337 73 85 chr17 49143300 49143699 -46128952 - MTD LTR MaLR -1 418 25 2 959 1182 93 0 12 chr17 49145763 49146165 -46126486 + (TCTCTG)n Simple_repeat Simple_repeat 1 397 0 2 959 1597 159 182 6 chr17 49146866 49147201 -46125450 - ORR1B1 LTR MaLR 0 394 1 2 959 180 305 110 0 chr17 49148067 49148149 -46124502 + L2a LINE L2 3306 3396 -30 2 959 642 258 74 10 chr17 49148389 49148592 -46124059 - B4 SINE B4 -2 290 76 2 959 180 0 0 0 chr17 49149556 49149576 -46123075 + (TG)n Simple_repeat Simple_repeat 2 21 0 2 959 422 261 135 0 chr17 49149590 49149701 -46122950 - RSINE1 SINE B4 -38 127 2 2 959 256 349 76 15 chr17 49150250 49150381 -46122270 + B1F2 SINE Alu 3 141 -8 2 959 488 286 20 60 chr17 49150398 49150547 -46122104 + ID_B1 SINE B4 80 222 -2 2 959 261 0 21 64 chr17 49151049 49151096 -46121555 + (CAAAAA)n Simple_repeat Simple_repeat 2 46 0 2 959 613 250 165 0 chr17 49151112 49151300 -46121351 + ID_B1 SINE B4 4 222 -2 3 959 184 30 29 29 chr17 49151567 49151601 -46121050 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 959 1038 62 13 40 chr17 49151604 49151755 -46120896 - B1_Mus2 SINE Alu 0 147 1 3 119 548 209 0 22 chr17 49151831 49152012 -46120639 + (TG)n Simple_repeat Simple_repeat 1 177 0 3 960 407 244 0 25 chr17 49152057 49152506 -46120145 + (TG)n Simple_repeat Simple_repeat 1 437 0 3 960 360 229 0 35 chr17 49152545 49152717 -46119934 + (TG)n Simple_repeat Simple_repeat 1 166 0 3 960 790 267 50 21 chr17 49152733 49153016 -46119635 - B4A SINE B4 -1 291 1 3 960 1049 219 89 111 chr17 49153324 49153684 -46118967 + ORR1E LTR MaLR 3 354 -5 3 960 300 27 0 0 chr17 49153930 49153967 -46118684 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 960 261 191 29 29 chr17 49154479 49154549 -46118102 - MTD LTR MaLR 0 419 350 3 960 314 338 6 75 chr17 49154554 49154714 -46117937 - RMER10B LTR ERVL 0 398 250 3 960 1119 215 8 0 chr17 49155006 49155243 -46117408 - MTD LTR MaLR -128 291 53 3 960 22 0 0 0 chr17 49155615 49155637 -46117014 + AT_rich Low_complexity Low_complexity 1 22 0 3 960 455 242 109 0 chr17 49155907 49156035 -46116616 + ID_B1 SINE B4 83 224 0 3 960 573 277 18 114 chr17 49156526 49156660 -46115991 - B4 SINE B4 -80 212 84 3 960 372 224 140 86 chr17 49156660 49156846 -46115805 - B3A SINE B2 0 198 3 3 960 573 277 18 114 chr17 49156846 49156939 -46115712 - B4 SINE B4 -209 83 7 3 960 183 211 0 119 chr17 49158018 49158077 -46114574 - MIR SINE MIR -148 114 63 3 960 423 0 0 0 chr17 49158976 49159023 -46113628 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 960 2233 98 3 58 chr17 49159256 49159601 -46113050 - ORR1A2 LTR MaLR 0 327 2 3 960 217 327 71 19 chr17 49162461 49162637 -46110014 - MIR3 SINE MIR -5 203 19 3 960 281 69 92 36 chr17 49164135 49164199 -46108452 + B4 SINE B4 2 76 -89 3 960 677 247 81 60 chr17 49164523 49164807 -46107844 + RMER21B LTR ERV1 278 567 -275 3 960 254 194 81 0 chr17 49165283 49165345 -46107306 - B3A SINE B2 0 198 132 3 960 222 323 20 40 chr17 49165350 49165450 -46107201 - B4A SINE B4 -124 168 71 3 960 299 335 110 30 chr17 49166108 49166308 -46106343 + LTR16C LTR ERVL 272 487 -2 3 960 252 0 0 0 chr17 49167748 49167776 -46104875 + (TC)n Simple_repeat Simple_repeat 2 29 0 3 960 606 93 0 0 chr17 49167776 49167861 -46104790 + (TG)n Simple_repeat Simple_repeat 1 86 0 3 960 379 167 70 105 chr17 49168057 49168171 -46104480 + PB1D9 SINE Alu 11 120 0 3 960 189 239 43 0 chr17 49168483 49168529 -46104122 + L2b LINE L2 3310 3357 -18 3 960 314 306 17 17 chr17 49170718 49170860 -46101791 - MIR SINE MIR -73 195 47 3 960 281 289 136 35 chr17 49171528 49171700 -46100951 - MIR3 SINE MIR -41 235 39 3 960 260 267 72 54 chr17 49171948 49172059 -46100592 + MIR SINE MIR 79 191 -71 3 960 210 222 0 0 chr17 49172772 49172817 -46099834 + MIRc SINE MIR 81 125 -143 3 960 1050 77 7 27 chr17 49173620 49173767 -46098884 - B1_Mus1 SINE Alu 0 148 5 3 960 1410 66 5 16 chr17 49173843 49174029 -46098622 - B2_Mm1a SINE B2 -9 184 1 3 960 416 298 28 7 chr17 49174031 49174173 -46098478 + ORSL DNA Tip100 123 267 -8 3 960 962 300 8 33 chr17 49175314 49175559 -46097092 + B4 SINE B4 54 292 0 3 960 363 96 0 0 chr17 49175972 49176024 -46096627 + (GA)n Simple_repeat Simple_repeat 2 53 0 3 960 221 125 0 0 chr17 49176024 49176056 -46096595 + (GGA)n Simple_repeat Simple_repeat 2 33 0 3 960 237 330 91 18 chr17 49176312 49176526 -46096125 + MIR SINE MIR 1 228 -34 3 960 357 24 0 0 chr17 49177284 49177326 -46095325 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 960 442 288 74 12 chr17 49177533 49177695 -46094956 - B4A SINE B4 -120 172 1 3 960 789 261 85 0 chr17 49177695 49177904 -46094747 - B4 SINE B4 -65 227 1 3 960 2335 196 251 10 chr17 49178917 49179510 -46093141 - RMER19A LTR ERVK -1 736 1 3 960 1573 214 46 18 chr17 49179803 49180168 -46092483 - MTD LTR MaLR 0 407 22 3 960 261 0 0 0 chr17 49180168 49180197 -46092454 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 960 205 138 0 0 chr17 49180197 49180226 -46092425 + (TC)n Simple_repeat Simple_repeat 2 30 0 3 960 453 279 0 0 chr17 49180236 49180347 -46092304 - MTC-int LTR MaLR 0 1258 1148 3 960 1197 51 0 0 chr17 49180493 49180631 -46092020 + B1_Mus1 SINE Alu 2 139 -9 3 960 216 86 0 0 chr17 49180631 49180666 -46091985 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 960 999 189 74 12 chr17 49180720 49180796 -46091855 - RLTR16 LTR ERVK -12 493 416 3 960 944 106 0 37 chr17 49180796 49180983 -46091668 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 960 999 189 74 12 chr17 49180983 49181163 -46091488 - RLTR16 LTR ERVK -90 415 223 3 960 235 320 43 61 chr17 49181217 49181380 -46091271 - L2 LINE L2 -557 2862 2703 3 960 282 270 124 0 chr17 49181613 49181702 -46090949 - MLT1J LTR MaLR -201 311 212 3 960 255 73 36 18 chr17 49181829 49181885 -46090766 + (CAAA)n Simple_repeat Simple_repeat 2 58 0 3 960 276 100 0 0 chr17 49182643 49182683 -46089968 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 960 596 304 38 11 chr17 49182683 49182860 -46089791 - B3A SINE B2 -15 183 1 3 960 342 80 0 0 chr17 49183070 49183120 -46089531 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 960 484 278 39 16 chr17 49184619 49184747 -46087904 + RSINE1 SINE B4 16 146 -19 3 960 655 288 0 0 chr17 49185336 49185468 -46087183 + RSINE1 SINE B4 2 133 -32 3 960 227 255 0 18 chr17 49186301 49186357 -46086294 + GA-rich Low_complexity Low_complexity 2 56 0 3 960 634 299 101 62 chr17 49186564 49186900 -46085751 - ORR1E LTR MaLR -9 350 2 3 960 252 0 0 0 chr17 49186924 49186952 -46085699 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 3 960 553 336 126 95 chr17 49187437 49188081 -46084570 - MLT1E1A LTR MaLR -10 670 7 3 960 483 291 161 14 chr17 49188670 49188813 -46083838 + RSINE1 SINE B4 2 165 0 3 960 390 91 0 0 chr17 49188913 49188968 -46083683 + (CA)n Simple_repeat Simple_repeat 1 55 0 3 960 424 303 72 36 chr17 49188991 49189186 -46083465 - ORR1E LTR MaLR -150 209 8 3 960 1714 21 0 0 chr17 49189590 49189782 -46082869 + B2_Mm1a SINE B2 2 193 0 3 960 287 25 25 0 chr17 49189958 49189998 -46082653 + (TGGA)n Simple_repeat Simple_repeat 3 43 0 3 960 457 243 8 0 chr17 49190166 49190407 -46082244 + (TG)n Simple_repeat Simple_repeat 1 243 0 3 960 1483 250 27 16 chr17 49191747 49192121 -46080530 + MTE2b LTR MaLR 2 379 0 3 960 319 317 48 8 chr17 49192143 49192267 -46080384 - Charlie4z DNA MER1_type -33 134 6 3 960 346 319 105 35 chr17 49193467 49193639 -46079012 + L1MC4a LINE L1 7699 7882 0 3 960 550 333 107 21 chr17 49193657 49193887 -46078764 - MLT1J LTR MaLR -131 381 131 3 960 2036 163 104 5 chr17 49193887 49194263 -46078388 + MTC LTR MaLR 1 413 -8 3 960 239 271 14 0 chr17 49194273 49194343 -46078308 - MLT1J LTR MaLR -384 128 58 3 960 683 167 7 0 chr17 49194351 49194489 -46078162 + CT-rich Low_complexity Low_complexity 2 140 0 3 960 287 236 28 0 chr17 49194643 49194715 -46077936 - L1MA8 LINE L1 -129 6162 6089 3 960 266 262 0 47 chr17 49195816 49195880 -46076771 + ID_B1 SINE B4 109 169 -55 3 960 276 304 11 32 chr17 49197124 49197219 -46075432 - MIR SINE MIR -123 139 47 3 960 354 211 82 21 chr17 49197304 49197401 -46075250 + PB1D9 SINE Alu 17 119 -1 3 960 264 262 86 47 chr17 49197681 49197809 -46074842 + MIRb SINE MIR 34 166 -102 3 960 352 259 14 2 chr17 49197881 49197969 -46074682 - B4A SINE B4 -73 92 4 3 960 579 242 0 139 chr17 49198330 49198503 -46074148 + RSINE1 SINE B4 2 150 -15 3 960 248 298 38 102 chr17 49199011 49199168 -46073483 + LTR33A LTR ERVL 3 149 -371 3 960 566 254 247 6 chr17 49200941 49201115 -46071536 - ID_B1 SINE B4 -8 216 1 3 960 506 332 118 52 chr17 49201339 49201644 -46071007 - LTR16C LTR ERVL -17 472 148 3 960 597 227 19 81 chr17 49203506 49203717 -46068934 + B3A SINE B2 1 198 0 3 960 22 0 0 0 chr17 49205110 49205132 -46067519 + AT_rich Low_complexity Low_complexity 1 22 0 3 960 404 312 61 28 chr17 49205772 49205953 -46066698 - MER58A DNA MER1_type 0 224 38 3 960 565 281 132 13 chr17 49206004 49206231 -46066420 + Charlie5 DNA MER1_type 2371 2624 0 3 960 1106 262 109 3 chr17 49206618 49206921 -46065730 - ORR1D2 LTR MaLR -33 337 3 3 960 939 315 21 11 chr17 49207037 49207316 -46065335 + B4A SINE B4 2 283 -9 3 960 219 139 0 0 chr17 49207813 49207849 -46064802 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 960 477 320 2 4 chr17 49208303 49208789 -46063862 + (TCCA)n Simple_repeat Simple_repeat 1 484 0 3 960 205 374 55 30 chr17 49208868 49209069 -46063582 - L2a LINE L2 -42 3384 3179 3 960 540 0 0 0 chr17 49210789 49210849 -46061802 + (TG)n Simple_repeat Simple_repeat 2 61 0 3 960 324 167 0 0 chr17 49211142 49211214 -46061437 + (TG)n Simple_repeat Simple_repeat 1 72 0 3 960 465 315 42 0 chr17 49211630 49211773 -46060878 + B1F1 SINE Alu 1 149 0 3 960 246 143 0 0 chr17 49212262 49212311 -46060340 + (TCTCTG)n Simple_repeat Simple_repeat 6 54 0 3 960 331 382 52 13 chr17 49212810 49212964 -46059687 - L1M5 LINE L1 -570 5554 5395 3 960 248 289 24 95 chr17 49213271 49213312 -46059339 + MT2B LTR ERVL 123 154 -447 3 960 585 209 48 54 chr17 49213312 49213421 -46059230 + B1_Mur1 SINE Alu 1 113 -36 3 960 2558 125 5 50 chr17 49213421 49213817 -46058834 - ORR1C1 LTR MaLR 0 378 1 3 960 585 209 48 54 chr17 49213817 49213843 -46058808 + B1_Mur1 SINE Alu 114 136 -13 3 960 378 0 0 0 chr17 49213843 49213885 -46058766 + (CAAAA)n Simple_repeat Simple_repeat 1 42 0 4 960 453 316 108 0 chr17 49214028 49214186 -46058465 + B4A SINE B4 1 175 -117 4 960 664 145 35 0 chr17 49214823 49214995 -46057656 + (TCTA)n Simple_repeat Simple_repeat 2 179 0 4 960 1231 61 17 29 chr17 49215588 49216003 -46056648 + (TCTA)n Simple_repeat Simple_repeat 1 409 0 4 960 226 333 13 0 chr17 49216469 49216544 -46056107 + (CATG)n Simple_repeat Simple_repeat 3 78 0 4 960 575 193 131 0 chr17 49218024 49218169 -46054482 - MTEa LTR MaLR -34 345 182 4 960 783 289 13 42 chr17 49218164 49218402 -46054249 - MTEa LTR MaLR -127 252 22 4 960 214 328 4 86 chr17 49219604 49219720 -46052931 + MIRb SINE MIR 78 183 -93 4 960 434 281 24 16 chr17 49221223 49221346 -46051305 - MTE2a LTR MaLR 0 379 256 4 960 857 259 31 31 chr17 49221468 49221691 -46050960 + ID_B1 SINE B4 1 223 -1 4 960 650 291 36 36 chr17 49221701 49221897 -46050754 + B3A SINE B2 1 196 -2 4 960 45 0 0 0 chr17 49221914 49221959 -46050692 + AT_rich Low_complexity Low_complexity 1 45 0 4 960 584 190 34 17 chr17 49221959 49222077 -46050574 - PB1D9 SINE Alu 0 120 1 4 960 296 301 77 69 chr17 49222216 49222462 -46050189 - L2 LINE L2 -351 3068 2821 4 960 867 20 0 0 chr17 49222784 49222885 -46049766 + (TC)n Simple_repeat Simple_repeat 1 101 0 4 960 923 227 31 12 chr17 49222894 49223131 -46049520 - ID_B1 SINE B4 -48 244 4 4 960 504 0 0 0 chr17 49224192 49224248 -46048403 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 960 653 203 30 0 chr17 49225498 49225631 -46047020 - B4A SINE B4 -26 266 130 4 960 243 274 143 0 chr17 49225993 49226077 -46046574 - MIRb SINE MIR -118 150 55 4 960 342 98 0 0 chr17 49226393 49226444 -46046207 + (T)n Simple_repeat Simple_repeat 1 51 0 4 960 405 0 0 0 chr17 49226779 49226824 -46045827 + (TCCA)n Simple_repeat Simple_repeat 2 46 0 4 960 377 307 0 157 chr17 49227001 49227084 -46045567 - B4 SINE B4 -4 288 214 4 960 572 280 69 20 chr17 49227084 49227288 -46045363 - B3 SINE B2 -1 215 2 4 960 377 307 0 157 chr17 49227288 49227370 -46045281 - B4 SINE B4 -79 213 149 4 960 308 321 56 70 chr17 49227423 49227622 -46045029 + MIR SINE MIR 60 254 -14 4 960 235 338 111 19 chr17 49227767 49227975 -46044676 - MER2 DNA MER2_type -8 337 111 4 960 529 313 18 66 chr17 49227980 49228206 -46044445 + B4A SINE B4 1 215 -77 4 960 229 260 0 49 chr17 49228229 49228310 -46044341 + (CA)n Simple_repeat Simple_repeat 2 78 0 4 960 476 282 27 54 chr17 49229365 49229549 -46043102 - MTEb LTR MaLR 0 379 201 4 960 282 116 0 0 chr17 49229552 49229595 -46043056 + (GGGAGA)n Simple_repeat Simple_repeat 1 43 0 4 960 737 143 24 8 chr17 49229769 49229896 -46042755 + B3 SINE B2 2 130 -86 4 960 234 0 0 0 chr17 49229934 49229960 -46042691 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 960 470 325 96 10 chr17 49230456 49230664 -46041987 - MER5C1 DNA MER1_type -25 238 13 4 960 3774 217 35 17 chr17 49230821 49231763 -46040888 - RCHARR1 DNA MER1_type -6 968 10 4 960 554 285 29 81 chr17 49231774 49231953 -46040698 - B3A SINE B2 -2 214 40 4 960 1187 54 0 7 chr17 49231953 49232102 -46040549 + B1_Mus1 SINE Alu 1 148 0 4 960 554 311 0 87 chr17 49232102 49232132 -46040519 - B3A SINE B2 -156 42 16 4 960 272 293 37 0 chr17 49232632 49232714 -46039937 + B4 SINE B4 1 85 -207 4 960 414 304 0 57 chr17 49232735 49232857 -46039794 + B4 SINE B4 142 256 -36 4 960 360 0 0 0 chr17 49232858 49232898 -46039753 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 960 414 0 0 0 chr17 49233145 49233191 -46039460 + (TC)n Simple_repeat Simple_repeat 2 47 0 4 960 579 29 0 0 chr17 49233191 49233259 -46039392 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 960 683 223 0 0 chr17 49233272 49233402 -46039249 - B3A SINE B2 -68 130 1 4 960 297 20 60 0 chr17 49234031 49234081 -46038570 + (CAA)n Simple_repeat Simple_repeat 2 54 0 4 960 435 265 20 0 chr17 49234094 49234192 -46038459 + RSINE1 SINE B4 8 107 -58 4 960 28 0 0 0 chr17 49234242 49234270 -46038381 + AT_rich Low_complexity Low_complexity 1 28 0 4 960 235 277 42 21 chr17 49235382 49235478 -46037173 + CT-rich Low_complexity Low_complexity 2 99 0 4 960 640 204 291 0 chr17 49238513 49238685 -46033966 + ID_B1 SINE B4 3 224 0 4 960 498 258 17 0 chr17 49239442 49239562 -46033089 + ID_B1 SINE B4 98 219 -5 4 960 878 215 11 6 chr17 49239576 49239754 -46032897 + B3A SINE B2 5 183 -15 4 960 1215 260 51 25 chr17 49241488 49241843 -46030808 - MTEa LTR MaLR -11 368 5 4 960 336 350 7 21 chr17 49242636 49242779 -46029872 + B4A SINE B4 132 272 -20 4 960 666 139 0 0 chr17 49242840 49242991 -46029660 + (CA)n Simple_repeat Simple_repeat 2 152 0 4 960 984 97 0 0 chr17 49243517 49243746 -46028905 + (GA)n Simple_repeat Simple_repeat 1 229 0 4 960 373 309 14 14 chr17 49244038 49244176 -46028475 - B3A SINE B2 -12 186 49 4 960 824 280 5 0 chr17 49244959 49245159 -46027492 + ID_B1 SINE B4 2 202 -22 4 960 957 95 5 43 chr17 49245159 49245346 -46027305 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 4 960 498 75 0 0 chr17 49245348 49245415 -46027236 + (GAAA)n Simple_repeat Simple_repeat 3 69 0 4 960 330 312 19 7 chr17 49245428 49245583 -46027068 + GA-rich Low_complexity Low_complexity 1 157 0 4 960 216 0 0 0 chr17 49245877 49245901 -46026750 + (TC)n Simple_repeat Simple_repeat 1 24 0 4 960 247 156 52 0 chr17 49245925 49246002 -46026649 + (TCTG)n Simple_repeat Simple_repeat 2 82 0 4 960 366 328 101 62 chr17 49246013 49246289 -46026362 - B4 SINE B4 0 292 6 4 960 3355 18 8 5 chr17 49246368 49246757 -46025894 - RLTR10 LTR ERVK 0 390 1 4 960 1191 196 145 22 chr17 49248032 49248350 -46024301 - MTEa LTR MaLR 0 379 23 4 960 180 111 0 0 chr17 49248367 49248394 -46024257 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 960 230 250 62 12 chr17 49248452 49248533 -46024118 - MIR SINE MIR -119 143 59 4 960 4373 115 43 55 chr17 49249021 49249784 -46022867 - RMER6A LTR ERVK 0 756 3 4 960 331 301 69 26 chr17 49250634 49250750 -46021901 - B4A SINE B4 -89 203 83 4 960 252 289 110 169 chr17 49250787 49251095 -46021556 - B4A SINE B4 0 292 3 4 960 222 118 0 0 chr17 49251247 49251281 -46021370 + (TA)n Simple_repeat Simple_repeat 1 34 0 4 960 217 68 45 0 chr17 49253601 49253645 -46019006 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 960 392 271 182 12 chr17 49253651 49253898 -46018753 - L1MB7 LINE L1 -77 6967 6679 4 960 545 325 78 29 chr17 49253914 49254042 -46018609 - L1MB7 LINE L1 -401 6633 6504 4 960 1355 202 52 49 chr17 49254042 49254411 -46018240 - ORR1D2 LTR MaLR 0 370 1 4 960 545 325 78 29 chr17 49254411 49254665 -46017986 - L1MB7 LINE L1 -531 6503 6232 4 960 366 132 60 0 chr17 49254678 49254761 -46017890 + CT-rich Low_complexity Low_complexity 5 92 0 4 960 877 101 7 7 chr17 49254899 49255039 -46017612 + (TCTA)n Simple_repeat Simple_repeat 2 141 0 4 960 248 278 110 12 chr17 49255050 49255303 -46017348 - L1MB7 LINE L1 -4106 3228 3061 4 960 924 288 107 81 chr17 49255450 49256421 -46016230 - L1MB7 LINE L1 -4623 2385 1390 4 960 396 0 0 0 chr17 49256432 49256476 -46016175 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 960 1709 21 0 0 chr17 49256521 49256713 -46015938 + B2_Mm1a SINE B2 2 193 0 4 960 405 70 0 0 chr17 49256884 49256941 -46015710 + (TTCA)n Simple_repeat Simple_repeat 1 57 0 4 960 630 282 46 0 chr17 49256953 49257127 -46015524 + B3A SINE B2 2 183 -15 4 960 818 268 38 123 chr17 49257356 49257734 -46014917 - ORR1E LTR MaLR -2 377 1 4 960 383 315 144 23 chr17 49257916 49258264 -46014387 - L1MC4 LINE L1 -155 7887 7498 4 960 262 171 0 28 chr17 49258313 49258385 -46014266 + (TG)n Simple_repeat Simple_repeat 1 70 0 4 960 226 322 11 11 chr17 49258395 49258483 -46014168 + (TATATG)n Simple_repeat Simple_repeat 3 90 0 4 960 632 231 88 7 chr17 49258504 49258652 -46013999 + ORR1E LTR MaLR 1 160 -199 4 960 410 311 145 25 chr17 49258662 49258903 -46013748 - B4A SINE B4 -18 274 5 4 960 351 192 0 0 chr17 49259327 49259405 -46013246 + (CATATA)n Simple_repeat Simple_repeat 4 81 0 4 960 252 304 20 80 chr17 49259493 49259593 -46013058 - B3A SINE B2 -4 194 101 4 960 22 0 0 0 chr17 49259668 49259690 -46012961 + AT_rich Low_complexity Low_complexity 1 22 0 4 960 345 302 37 19 chr17 49259890 49259998 -46012653 - B1F1 SINE Alu -37 112 3 4 960 400 35 17 17 chr17 49260051 49260110 -46012541 + (TG)n Simple_repeat Simple_repeat 1 59 0 4 960 286 309 116 36 chr17 49260147 49260259 -46012392 + PB1D10 SINE Alu 1 120 -7 4 960 803 38 19 0 chr17 49260586 49260692 -46011959 + (TTTC)n Simple_repeat Simple_repeat 2 109 0 4 960 298 257 109 45 chr17 49260848 49260958 -46011693 - PB1D10 SINE Alu 0 117 1 4 960 289 243 152 17 chr17 49261274 49261458 -46011193 - L1MEc LINE L1 -1606 4713 4505 4 960 1094 258 98 6 chr17 49261493 49261852 -46010799 - MTD LTR MaLR -14 405 14 4 960 327 278 24 3 chr17 49261951 49262064 -46010587 - L1MEc LINE L1 -1954 4365 4245 4 960 670 263 110 10 chr17 49262202 49262402 -46010249 - ID_B1 SINE B4 -1 223 4 4 960 725 302 10 0 chr17 49262443 49262645 -46010006 - B3 SINE B2 -12 204 1 4 960 384 282 18 48 chr17 49262664 49262871 -46009780 - L1MEc LINE L1 -2278 4041 3836 4 960 474 33 0 0 chr17 49262884 49262944 -46009707 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 960 432 324 26 39 chr17 49263013 49263244 -46009407 - B4 SINE B4 -63 229 2 4 960 349 299 122 34 chr17 49263307 49263570 -46009081 - L1MEc LINE L1 -2547 3772 3487 4 960 25 51 0 0 chr17 49263577 49263616 -46009035 + AT_rich Low_complexity Low_complexity 1 39 0 4 960 636 246 63 17 chr17 49263625 49263799 -46008852 - B3A SINE B2 -16 182 1 4 960 1247 279 103 18 chr17 49263836 49264399 -46008252 - L1MEc LINE L1 -5225 1175 565 4 960 376 233 0 0 chr17 49264530 49264603 -46008048 - B4 SINE B4 -4 288 216 4 960 180 0 0 0 chr17 49264617 49264637 -46008014 + (TC)n Simple_repeat Simple_repeat 1 20 0 4 960 484 217 185 20 chr17 49264696 49264842 -46007809 - B3 SINE B2 -46 170 1 5 960 650 280 70 5 chr17 49264842 49265057 -46007594 - B4A SINE B4 -59 233 5 4 960 307 279 40 79 chr17 49265107 49265259 -46007392 - L1MEc LINE L1 -6080 320 175 4 960 574 285 13 0 chr17 49265366 49265517 -46007134 - RSINE1 SINE B4 -12 153 1 5 960 334 209 120 11 chr17 49265678 49265770 -46006881 - Lx4B LINE L1 -4 7054 6953 5 960 269 192 188 82 chr17 49265862 49265947 -46006704 - Lx5 LINE L1 -138 6912 6819 5 960 492 234 94 54 chr17 49266333 49266482 -46006169 - RSINE1 SINE B4 -8 157 3 5 960 438 20 0 0 chr17 49266812 49266863 -46005788 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 960 243 103 0 0 chr17 49267001 49267040 -46005611 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 960 300 248 83 37 chr17 49267064 49267173 -46005478 + B4A SINE B4 115 228 -64 5 960 942 250 0 5 chr17 49267164 49267369 -46005282 + B3 SINE B2 7 210 -6 5 960 297 345 70 11 chr17 49267703 49267987 -46004664 - L1MC4 LINE L1 -4538 1677 1377 5 960 315 0 0 0 chr17 49268023 49268058 -46004593 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 960 750 226 30 45 chr17 49268082 49268281 -46004370 - B3A SINE B2 -2 196 1 5 960 2266 144 17 78 chr17 49268740 49269153 -46003498 + ORR1B1 LTR MaLR 5 392 -2 5 960 492 247 60 0 chr17 49269341 49269507 -46003144 + MTE2a LTR MaLR 204 379 0 5 960 250 231 0 0 chr17 49269541 49269593 -46003058 - RMER15 LTR ERVL -96 479 428 5 960 232 331 142 26 chr17 49269757 49269912 -46002739 - Lx8 LINE L1 -249 7224 7052 5 960 536 279 0 67 chr17 49270696 49270861 -46001790 - MTE2a LTR MaLR -52 327 174 5 960 23 0 0 0 chr17 49271103 49271126 -46001525 + AT_rich Low_complexity Low_complexity 1 23 0 5 960 244 275 39 108 chr17 49271397 49271453 -46001198 + B4A SINE B4 117 176 -116 5 960 1274 125 115 0 chr17 49271453 49271653 -46000998 + URR1A DNA MER1_type 1 223 -3 5 960 244 275 39 108 chr17 49271653 49271694 -46000957 + B4A SINE B4 177 206 -86 5 960 1763 138 22 19 chr17 49271694 49272011 -46000640 + ORR1A3 LTR MaLR 1 318 -8 5 960 374 280 20 0 chr17 49272049 49272149 -46000502 + B1_Mus1 SINE Alu 32 133 -15 5 960 10111 163 152 21 chr17 49272199 49273992 -45998659 + L1_Mur3 LINE L1 301 2484 -3396 5 960 387 0 0 0 chr17 49273992 49274035 -45998616 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 960 10111 150 195 24 chr17 49274035 49275435 -45997216 + L1_Mur3 LINE L1 2485 3990 -1890 5 960 2058 92 36 60 chr17 49275437 49275772 -45996879 + ORR1A4 LTR MaLR 3 329 0 5 960 8741 144 53 114 chr17 49275772 49277856 -45994795 + ORR1A4-int LTR MaLR 1 1958 -5 5 960 1890 155 18 58 chr17 49277861 49278204 -45994447 + ORR1A4 LTR MaLR 1 329 0 5 960 577 148 46 0 chr17 49278204 49278312 -45994339 + L1_Mur3 LINE L1 3987 4099 -1781 5 960 21191 52 6 2 chr17 49278310 49281739 -45990912 - L1Md_F3 LINE L1 -1 6583 3142 5 960 1333 185 294 2 chr17 49281736 49282138 -45990513 - L1Md_A LINE L1 -5844 880 362 5 960 4072 134 40 26 chr17 49282140 49282938 -45989713 + L1_Mur3 LINE L1 4086 4894 -986 5 14 2259 190 41 7 chr17 49282928 49283388 -45989263 + Lx6 LINE L1 6277 6752 -708 5 961 642 130 0 0 chr17 49283391 49283499 -45989152 + (GGAA)n Simple_repeat Simple_repeat 3 110 0 5 961 683 168 217 0 chr17 49283499 49283660 -45988991 + Lx7 LINE L1 6756 6951 -745 5 961 708 202 12 12 chr17 49284004 49284349 -45988302 + GA-rich Low_complexity Low_complexity 1 345 0 5 961 1082 30 0 7 chr17 49284351 49284486 -45988165 + (GGAA)n Simple_repeat Simple_repeat 3 136 0 5 961 1301 263 106 19 chr17 49285352 49285538 -45987113 + RLTR11A2 LTR ERVK 7 258 -269 5 961 435 19 0 0 chr17 49285538 49285590 -45987061 + (GGAA)n Simple_repeat Simple_repeat 2 53 0 5 961 1301 259 68 18 chr17 49285590 49285843 -45986808 + RLTR11A2 LTR ERVK 259 512 -15 5 961 22 35 0 0 chr17 49286237 49286266 -45986385 + AT_rich Low_complexity Low_complexity 1 29 0 5 961 342 0 0 0 chr17 49286794 49286832 -45985819 + (T)n Simple_repeat Simple_repeat 1 38 0 5 961 332 317 56 48 chr17 49286867 49286993 -45985658 + B4A SINE B4 158 284 -8 5 961 210 329 13 0 chr17 49287003 49287082 -45985569 + (CA)n Simple_repeat Simple_repeat 1 80 0 5 961 540 100 0 0 chr17 49287145 49287225 -45985426 + (CA)n Simple_repeat Simple_repeat 1 80 0 5 961 227 301 117 37 chr17 49287424 49287586 -45985065 + L1M3 LINE L1 5616 5790 -378 5 961 624 307 51 64 chr17 49287712 49288008 -45984643 + B4A SINE B4 1 292 0 5 961 659 144 0 7 chr17 49288032 49288172 -45984479 + (CA)n Simple_repeat Simple_repeat 2 140 0 5 961 741 230 39 13 chr17 49288274 49288428 -45984223 + RSINE1 SINE B4 8 165 0 5 961 612 228 3 0 chr17 49288428 49288757 -45983894 + (CA)n Simple_repeat Simple_repeat 1 330 0 5 961 349 191 0 16 chr17 49288790 49288854 -45983797 + HAL1-3A_ME LINE L1 1974 2036 -822 5 961 535 245 45 26 chr17 49289334 49289489 -45983162 + RMER13B LTR ERVK 742 899 -9 5 961 387 0 0 0 chr17 49289645 49289688 -45982963 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 961 308 281 47 55 chr17 49291731 49291859 -45980792 - ORR1E LTR MaLR -230 129 3 5 961 391 329 0 7 chr17 49291922 49292063 -45980588 + (TG)n Simple_repeat Simple_repeat 2 141 0 5 961 328 328 0 44 chr17 49292121 49292377 -45980274 + (TATATG)n Simple_repeat Simple_repeat 1 244 0 5 961 1190 68 0 0 chr17 49292528 49292676 -45979975 - B1_Mus1 SINE Alu 0 148 1 5 961 383 321 109 14 chr17 49292891 49293128 -45979523 - MIR SINE MIR -1 261 7 5 961 396 0 0 0 chr17 49294053 49294097 -45978554 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 961 611 258 103 6 chr17 49294181 49294337 -45978314 + ID_B1 SINE B4 49 219 -5 5 961 283 326 119 85 chr17 49294759 49294994 -45977657 + LTR33B LTR ERVL 65 307 -196 5 961 947 265 38 45 chr17 49295779 49296044 -45976607 + B4A SINE B4 1 263 -29 5 961 217 234 45 30 chr17 49296076 49296142 -45976509 + (CATG)n Simple_repeat Simple_repeat 4 70 0 5 961 466 241 35 0 chr17 49296182 49296298 -45976353 + Lx6 LINE L1 6957 7076 -384 5 961 980 108 0 38 chr17 49296315 49296498 -45976153 + (GGAA)n Simple_repeat Simple_repeat 3 178 0 5 961 288 331 233 0 chr17 49297892 49298055 -45974596 - MER21B LTR ERV1 -172 691 491 5 961 545 255 83 47 chr17 49298060 49298219 -45974432 - MTEa LTR MaLR -5 374 209 5 961 545 206 6 180 chr17 49298219 49298391 -45974260 + MT2A LTR ERVL 1 142 -391 5 961 14177 152 41 28 chr17 49298394 49300594 -45972057 - MERVL_2A-int LTR ERVL -2516 3245 1006 5 961 1774 165 91 26 chr17 49300594 49300793 -45971858 + RMER17C LTR ERVK 1 190 -220 5 961 468 35 0 0 chr17 49300793 49300851 -45971800 + (TC)n Simple_repeat Simple_repeat 2 59 0 5 961 1774 165 91 26 chr17 49300851 49301036 -45971615 + RMER17C LTR ERVK 191 409 -1 5 961 14177 152 41 28 chr17 49301036 49301418 -45971233 - MERVL_2A-int LTR ERVL -4756 1005 628 5 961 1740 135 53 39 chr17 49301418 49301787 -45970864 + ORR1A3 LTR MaLR 1 346 0 5 961 3122 178 55 7 chr17 49301787 49302387 -45970264 - MERVL_2A-int LTR ERVL -5129 632 4 5 961 648 158 0 0 chr17 49302440 49302554 -45970097 + (TA)n Simple_repeat Simple_repeat 2 115 0 5 961 1108 240 64 82 chr17 49302562 49303054 -45969597 - MT2B LTR ERVL -35 566 21 5 961 814 136 8 8 chr17 49305280 49305406 -45967245 + B1_Mus2 SINE Alu 22 147 0 5 961 656 290 46 9 chr17 49305766 49305985 -45966666 + MTD LTR MaLR 6 232 -187 5 961 4431 24 0 0 chr17 49306163 49306656 -45965995 - MT2_Mm LTR ERVL 0 493 1 5 961 435 293 0 0 chr17 49307154 49307253 -45965398 - MTEa LTR MaLR -280 99 1 5 961 322 321 12 81 chr17 49307282 49307455 -45965196 - MER21B LTR ERV1 -402 461 301 5 961 324 271 71 0 chr17 49308262 49308347 -45964304 + MTEa LTR MaLR 24 114 -265 5 961 405 0 0 0 chr17 49308427 49308472 -45964179 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 961 1607 152 79 10 chr17 49308472 49308766 -45963885 - ORR1B1 LTR MaLR -60 334 1 5 961 260 304 63 0 chr17 49308766 49308845 -45963806 - B3 SINE B2 -14 202 119 5 961 432 218 112 12 chr17 49308850 49308997 -45963654 - B4A SINE B4 -72 220 3 5 961 412 321 61 30 chr17 49309801 49309965 -45962686 + B4A SINE B4 10 178 -114 5 961 787 117 29 17 chr17 49309965 49310139 -45962512 + GA-rich Low_complexity Low_complexity 1 176 0 5 961 245 207 0 17 chr17 49310765 49310824 -45961827 + B1F SINE Alu 90 147 -2 5 961 294 269 12 37 chr17 49310838 49310919 -45961732 + ID4 SINE ID 2 80 -3 5 961 1546 207 109 86 chr17 49313120 49313633 -45959018 + RLTR11A LTR ERVK 1 525 -3 5 961 294 29 0 0 chr17 49315103 49315138 -45957513 + (TCC)n Simple_repeat Simple_repeat 1 35 0 5 961 1827 198 87 55 chr17 49315540 49316010 -45956641 - RLTR20B3 LTR ERVK -75 502 18 5 961 1636 281 81 36 chr17 49316035 49316593 -45956058 - MTE-int LTR MaLR -994 586 4 5 961 262 225 111 12 chr17 49316613 49316694 -45955957 - ORR1E LTR MaLR -35 344 256 5 961 312 316 50 20 chr17 49316779 49316879 -45955772 - ORR1E LTR MaLR -256 103 1 5 961 220 301 133 0 chr17 49317949 49318062 -45954589 + MIRc SINE MIR 85 212 -56 5 961 1491 154 67 142 chr17 49318267 49318403 -45954248 - RMER10B LTR ERVL 0 398 263 5 961 559 39 13 13 chr17 49318403 49318482 -45954169 + (GA)n Simple_repeat Simple_repeat 2 80 0 5 961 1491 154 67 142 chr17 49318482 49318775 -45953876 - RMER10B LTR ERVL -136 262 1 5 961 818 274 16 109 chr17 49318814 49319134 -45953517 + B4 SINE B4 1 290 -2 5 961 388 196 87 26 chr17 49319395 49319510 -45953141 - MER5A1 DNA MER1_type -29 137 16 5 961 330 364 80 42 chr17 49320042 49320306 -45952345 + L1ME4a LINE L1 5848 6121 -3 5 961 1274 246 28 11 chr17 49320513 49320800 -45951851 + B4A SINE B4 1 292 0 5 961 1994 127 19 13 chr17 49321307 49321625 -45951026 - RLTR15 LTR ERVK 0 359 40 5 961 688 301 14 5 chr17 49321650 49321867 -45950784 - ID_B1 SINE B4 -5 219 1 5 961 333 304 115 19 chr17 49322813 49322917 -45949734 + B3A SINE B2 1 114 -84 5 961 491 0 0 17 chr17 49322920 49322980 -45949671 + (TC)n Simple_repeat Simple_repeat 1 59 0 5 961 288 0 0 0 chr17 49322980 49323011 -45949640 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 961 216 312 52 31 chr17 49323214 49323310 -45949341 - L3b LINE CR1 -209 273 176 5 961 658 249 12 114 chr17 49323989 49324234 -45948417 + ID_B1 SINE B4 5 224 0 5 961 682 271 45 0 chr17 49325059 49325214 -45947437 - RSINE1 SINE B4 -1 164 3 6 961 305 88 35 0 chr17 49325366 49325423 -45947228 + (TCTCTG)n Simple_repeat Simple_repeat 6 64 0 6 961 540 111 0 0 chr17 49325577 49325658 -45946993 + (CGTG)n Simple_repeat Simple_repeat 1 81 0 6 961 371 317 142 40 chr17 49325666 49325919 -45946732 - B4 SINE B4 -10 282 4 6 961 301 316 84 136 chr17 49325919 49326161 -45946490 - B4A SINE B4 -69 223 1 6 961 1414 250 90 39 chr17 49326529 49326987 -45945664 + RMER13A LTR ERVK 2 632 -274 6 961 477 0 0 0 chr17 49326993 49327046 -45945605 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 961 225 274 39 0 chr17 49327063 49327114 -45945537 + RMER13A LTR ERVK 644 696 -212 6 961 311 326 65 52 chr17 49327334 49327469 -45945182 + RSINE1 SINE B4 3 140 -25 6 961 438 36 0 0 chr17 49327469 49327525 -45945126 + (CA)n Simple_repeat Simple_repeat 2 57 0 6 961 311 326 65 52 chr17 49327525 49327544 -45945107 + RSINE1 SINE B4 141 159 -6 6 961 767 313 5 40 chr17 49328343 49328566 -45944085 + B4A SINE B4 6 220 -72 6 961 251 310 0 0 chr17 49329127 49329214 -45943437 + (CCCA)n Simple_repeat Simple_repeat 1 87 0 6 961 297 0 0 0 chr17 49329401 49329434 -45943217 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 6 961 1061 234 4 31 chr17 49329445 49329670 -45942981 - ID_B1 SINE B4 0 224 6 6 961 360 0 0 0 chr17 49330736 49330776 -45941875 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 961 35 0 0 0 chr17 49330823 49330858 -45941793 + AT_rich Low_complexity Low_complexity 1 35 0 6 961 669 267 82 24 chr17 49330858 49331065 -45941586 - B4 SINE B4 -73 219 1 6 961 2070 227 19 4 chr17 49331074 49331543 -45941108 - Lx5 LINE L1 -1 7049 6574 6 961 320 349 45 8 chr17 49332773 49332906 -45939745 - MLT1G1 LTR MaLR -6 573 436 6 961 389 250 44 82 chr17 49332901 49333036 -45939615 + B3A SINE B2 68 197 -1 6 961 268 350 53 59 chr17 49333182 49333334 -45939317 - MLT1G1 LTR MaLR -343 212 62 6 961 345 275 21 32 chr17 49333407 49333501 -45939150 - RMER20B LTR ERVK -31 596 504 6 961 532 260 175 45 chr17 49333738 49334024 -45938627 - RMER20B LTR ERVK -97 530 208 6 961 2777 115 100 45 chr17 49334082 49334574 -45938077 - MURVY-LTR LTR ERV1 0 519 1 6 961 195 220 62 78 chr17 49334862 49334926 -45937725 + MIR SINE MIR 29 91 -171 6 961 497 274 11 70 chr17 49334969 49335172 -45937479 + B3 SINE B2 18 195 0 6 961 188 286 114 0 chr17 49335178 49335248 -45937403 + MIR SINE MIR 108 185 -77 6 961 227 261 158 24 chr17 49335951 49336101 -45936550 + MIR3 SINE MIR 43 192 -16 6 961 882 59 29 15 chr17 49336803 49336940 -45935711 + (TTTC)n Simple_repeat Simple_repeat 2 140 0 6 961 1064 58 0 42 chr17 49336940 49337083 -45935568 - B1_Mm SINE Alu -10 137 1 6 961 1019 130 6 0 chr17 49337182 49337351 -45935300 + (TTCTCC)n Simple_repeat Simple_repeat 2 171 0 6 961 386 206 27 14 chr17 49337367 49337441 -45935210 - B3 SINE B2 -135 81 7 6 961 392 0 21 0 chr17 49337610 49337658 -45934993 + (TTATA)n Simple_repeat Simple_repeat 5 53 0 6 961 784 233 27 45 chr17 49337706 49337926 -45934725 - B3 SINE B2 0 216 1 6 961 24 32 0 0 chr17 49338001 49338032 -45934619 + AT_rich Low_complexity Low_complexity 1 31 0 6 961 343 258 75 83 chr17 49338498 49338752 -45933899 + Ricksha_0 DNA MuDR 894 1145 -588 6 961 526 292 232 0 chr17 49338785 49339018 -45933633 - RMER15 LTR ERVL -14 561 275 6 961 373 288 95 53 chr17 49339142 49339311 -45933340 + Ricksha_0 DNA MuDR 1185 1360 -373 6 961 182 149 0 21 chr17 49339345 49339357 -45933294 + polypyrimidine Low_complexity Low_complexity 37 48 0 6 961 1240 57 11 11 chr17 49339357 49339535 -45933116 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 6 961 182 149 0 21 chr17 49339535 49339570 -45933081 + CT-rich Low_complexity Low_complexity 3 36 0 6 961 303 202 51 34 chr17 49339575 49339693 -45932958 - Lx8 LINE L1 -1 7472 7353 6 961 1305 210 224 15 chr17 49339722 49340065 -45932586 - MTD LTR MaLR -4 415 1 6 961 25 31 0 0 chr17 49340348 49340380 -45932271 + AT_rich Low_complexity Low_complexity 1 32 0 6 961 501 262 82 57 chr17 49340424 49340618 -45932033 + MER3 DNA MER1_type 9 207 -2 6 961 258 312 40 9 chr17 49342037 49342117 -45930534 + LTR16C LTR ERVL 259 388 -150 6 961 891 255 0 19 chr17 49342347 49342555 -45930096 - ID_B1 SINE B4 -19 205 2 6 961 293 247 39 13 chr17 49342981 49343059 -45929592 + MLT1J LTR MaLR 235 314 -198 6 961 3883 114 27 20 chr17 49343227 49343820 -45928831 + MT2B LTR ERVL 1 597 -4 6 961 537 16 0 0 chr17 49344193 49344255 -45928396 + (TC)n Simple_repeat Simple_repeat 2 63 0 6 961 939 227 244 52 chr17 49345290 49345676 -45926975 - RMER20B LTR ERVK -38 589 130 6 961 837 99 0 0 chr17 49346408 49346529 -45926122 + (TTC)n Simple_repeat Simple_repeat 2 122 0 6 961 276 266 15 15 chr17 49346529 49346594 -45926057 - ID4_ SINE ID -10 73 9 6 961 408 329 118 0 chr17 49347165 49347326 -45925325 + B3A SINE B2 1 180 -18 6 961 558 167 0 11 chr17 49348228 49348319 -45924332 + ID_B1 SINE B4 111 200 -24 6 961 288 0 0 0 chr17 49348339 49348371 -45924280 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 961 306 0 0 0 chr17 49348394 49348428 -45924223 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 961 342 0 0 0 chr17 49348883 49348921 -45923730 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 6 961 722 216 0 0 chr17 49348925 49349059 -45923592 - B1_Mus2 SINE Alu -13 134 1 6 961 315 0 0 0 chr17 49350075 49350110 -45922541 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 6 961 214 333 0 0 chr17 49350116 49350167 -45922484 - ID SINE ID -153 71 21 6 961 321 26 0 0 chr17 49350167 49350205 -45922446 + (TC)n Simple_repeat Simple_repeat 2 39 0 6 961 312 102 0 0 chr17 49350375 49350424 -45922227 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 961 323 331 91 19 chr17 49350484 49350638 -45922013 - B4A SINE B4 -1 291 127 6 961 401 200 93 12 chr17 49351121 49351207 -45921444 - PB1D10 SINE Alu -5 112 20 6 961 667 243 51 11 chr17 49351260 49351435 -45921216 - B3A SINE B2 -16 182 1 6 961 501 17 0 0 chr17 49352751 49352809 -45919842 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 961 546 303 60 8 chr17 49352860 49352993 -45919658 - RSINE1 SINE B4 -12 153 14 6 961 342 0 0 0 chr17 49354032 49354070 -45918581 + (GA)n Simple_repeat Simple_repeat 1 38 0 6 961 543 293 14 0 chr17 49354160 49354300 -45918351 + RSINE1 SINE B4 11 152 -13 6 961 549 0 0 0 chr17 49354316 49354377 -45918274 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 961 755 255 164 20 chr17 49355738 49355982 -45916669 + B4A SINE B4 8 286 -6 6 961 817 28 19 0 chr17 49356100 49356208 -45916443 + (TAGA)n Simple_repeat Simple_repeat 4 113 0 6 961 338 318 91 38 chr17 49356540 49356749 -45915902 + Lx8 LINE L1 7019 7238 -235 6 961 339 252 106 21 chr17 49356763 49356905 -45915746 + RMER15 LTR ERVL 408 561 -14 6 961 1012 207 33 14 chr17 49357307 49357518 -45915133 + B3 SINE B2 1 215 -1 6 961 430 272 65 22 chr17 49357553 49357656 -45914995 + ID_B1 SINE B4 2 103 -121 6 961 237 33 0 0 chr17 49357656 49357686 -45914965 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 6 961 430 272 65 22 chr17 49357686 49357721 -45914930 + ID_B1 SINE B4 104 146 -78 6 961 337 289 161 54 chr17 49357709 49357877 -45914774 + MTE2a LTR MaLR 31 216 -163 6 961 340 177 0 16 chr17 49357882 49357945 -45914706 + ORR1D2 LTR MaLR 1 62 -308 6 961 1735 173 88 40 chr17 49357945 49358318 -45914333 + ORR1B1 LTR MaLR 2 392 -2 6 961 880 268 21 54 chr17 49358321 49358562 -45914089 + ORR1D2 LTR MaLR 131 363 -7 6 961 449 264 55 25 chr17 49358571 49358700 -45913951 + MTE2a LTR MaLR 212 345 -34 6 961 1190 60 12 0 chr17 49358700 49358867 -45913784 + (TAGA)n Simple_repeat Simple_repeat 2 170 0 6 961 449 264 55 25 chr17 49358867 49358900 -45913751 + MTE2a LTR MaLR 346 378 -1 6 961 349 227 15 0 chr17 49360240 49360306 -45912345 + ID_B1 SINE B4 143 209 -15 6 961 202 345 107 18 chr17 49360324 49360548 -45912103 - L2a LINE L2 -33 3393 3150 6 961 2584 156 120 28 chr17 49360577 49361112 -45911539 - RLTR31A_Mm LTR ERVK 0 584 1 6 961 1078 259 41 25 chr17 49361112 49361505 -45911146 + L1_Rod LINE L1 5447 5845 -2 6 961 588 255 68 6 chr17 49361832 49361994 -45910657 + B3A SINE B2 22 193 -5 6 961 821 275 25 0 chr17 49362002 49362202 -45910449 + B3 SINE B2 1 205 -11 6 961 582 271 0 0 chr17 49362684 49362813 -45909838 + MER63D DNA AcHobo 240 368 -693 6 961 329 317 49 28 chr17 49363014 49363157 -45909494 - RMER15 LTR ERVL -155 420 275 6 961 558 287 79 0 chr17 49364967 49365131 -45907520 - ID_B1 SINE B4 -31 193 17 6 961 321 292 111 49 chr17 49365754 49365898 -45906753 + RLTR26 LTR ERVK 99 251 -391 6 961 789 238 65 0 chr17 49365898 49366083 -45906568 - B3 SINE B2 -19 197 1 6 961 610 273 129 16 chr17 49366112 49366298 -45906353 - B4 SINE B4 -69 223 17 6 961 286 239 0 15 chr17 49366797 49366865 -45905786 + PB1D10 SINE Alu 24 90 -27 6 961 717 264 163 16 chr17 49366902 49367148 -45905503 + B4A SINE B4 3 284 -8 6 961 310 342 57 13 chr17 49367162 49367319 -45905332 + HAL1-3A_ME LINE L1 2276 2439 -419 6 961 748 118 16 0 chr17 49367326 49367453 -45905198 + (GA)n Simple_repeat Simple_repeat 2 130 0 6 961 247 312 21 10 chr17 49367599 49367696 -45904955 + (TCCA)n Simple_repeat Simple_repeat 4 101 0 6 961 284 0 28 0 chr17 49367741 49367777 -45904874 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 6 961 180 235 0 0 chr17 49367952 49367986 -45904665 + MIRb SINE MIR 118 151 -117 6 961 687 344 93 18 chr17 49368053 49368331 -45904320 - MLT1H1 LTR MaLR -63 492 194 6 961 256 310 17 0 chr17 49369522 49369621 -45903030 + MIRb SINE MIR 78 178 -90 6 961 566 296 65 69 chr17 49369737 49369998 -45902653 + B4 SINE B4 4 263 -29 6 961 306 0 0 0 chr17 49370004 49370038 -45902613 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 961 2000 183 5 37 chr17 49371269 49371649 -45901002 - MTB_Mm LTR MaLR -39 368 1 7 961 3455 185 62 22 chr17 49371803 49372526 -45900125 + RMER1B Other Other 2 1066 0 7 961 183 241 67 92 chr17 49374381 49374500 -45898151 - L4 LINE RTE -612 1417 1302 7 961 314 366 93 22 chr17 49375293 49375519 -45897132 - LTR16B1 LTR ERVL -158 322 81 7 961 247 244 24 24 chr17 49375749 49375833 -45896818 + (TCCA)n Simple_repeat Simple_repeat 2 85 0 7 961 356 266 0 60 chr17 49376178 49376278 -45896373 + RMER30 DNA MER1_type 15 108 -94 7 961 195 129 0 0 chr17 49376624 49376655 -45895996 + (TCC)n Simple_repeat Simple_repeat 3 33 0 7 961 236 256 45 79 chr17 49376737 49376826 -45895825 + RMER30 DNA MER1_type 117 202 0 7 961 208 222 0 0 chr17 49377850 49377895 -45894756 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 961 459 0 0 0 chr17 49377947 49377998 -45894653 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 961 1173 49 0 0 chr17 49377999 49378142 -45894509 - B2_Mm2 SINE B2 -50 145 3 7 961 4014 51 0 12 chr17 49378177 49378669 -45893982 - L1_Mus1 LINE L1 0 6567 6082 7 961 673 269 59 55 chr17 49378674 49378910 -45893741 - B4A SINE B4 -41 251 15 7 961 253 237 13 38 chr17 49378840 49378919 -45893732 - ID2 SINE ID -1 82 6 7 961 322 260 49 59 chr17 49378921 49379013 -45893638 + MER2 DNA MER2_type 110 200 -145 7 961 238 274 40 14 chr17 49379013 49379087 -45893564 + ORR1D2 LTR MaLR 2 77 -293 7 961 566 276 18 49 chr17 49379105 49379196 -45893455 + B4A SINE B4 3 88 -204 7 961 273 295 53 79 chr17 49379196 49379310 -45893341 + B1_Mur2 SINE Alu 1 111 -38 7 961 272 299 15 0 chr17 49380310 49380377 -45892274 + MIR3 SINE MIR 122 189 -19 7 961 450 0 0 0 chr17 49380806 49380856 -45891795 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 961 233 399 34 17 chr17 49381320 49381496 -45891155 + MIRb SINE MIR 35 213 -55 7 961 226 226 161 0 chr17 49381801 49381863 -45890788 - B3A SINE B2 -6 192 121 7 961 787 253 138 18 chr17 49381817 49382042 -45890609 - B4A SINE B4 0 292 41 7 961 893 294 74 19 chr17 49382078 49382387 -45890264 - MER44B DNA MER2_type -215 335 10 7 961 257 341 80 22 chr17 49382993 49383131 -45889520 + MIRc SINE MIR 6 151 -117 7 961 616 210 161 25 chr17 49383134 49383295 -45889356 + B3A SINE B2 1 183 -15 7 961 582 14 0 0 chr17 49383320 49383361 -45889290 + (T)n Simple_repeat Simple_repeat 1 41 0 7 961 1193 88 0 0 chr17 49383361 49383508 -45889143 - B1_Mus2 SINE Alu 0 147 1 7 961 582 14 0 0 chr17 49383508 49383535 -45889116 + (T)n Simple_repeat Simple_repeat 1 27 0 7 961 213 304 29 14 chr17 49383696 49383766 -45888885 + ID_B1 SINE B4 83 153 -71 7 961 369 0 0 0 chr17 49383778 49383819 -45888832 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 961 247 217 0 155 chr17 49383819 49383890 -45888761 - B3A SINE B2 -56 142 83 7 961 226 344 10 0 chr17 49383922 49384018 -45888633 - MIRm SINE MIR -122 154 58 7 961 302 204 209 113 chr17 49384096 49384273 -45888378 - B3A SINE B2 0 198 5 7 961 960 223 44 0 chr17 49384466 49384672 -45887979 - B3 SINE B2 -1 215 1 7 961 216 320 98 20 chr17 49384685 49384787 -45887864 - PB1D10 SINE Alu -7 110 1 7 961 234 255 0 0 chr17 49385156 49385203 -45887448 + L2b LINE L2 3320 3366 -9 7 961 482 219 104 0 chr17 49385551 49385647 -45887004 + ID_B1 SINE B4 106 211 -13 7 961 604 321 17 28 chr17 49385729 49386075 -45886576 - L1MA4A LINE L1 -270 6021 5676 7 961 254 50 25 0 chr17 49386272 49386312 -45886339 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 7 961 189 0 0 0 chr17 49387055 49387076 -45885575 + (TG)n Simple_repeat Simple_repeat 2 22 0 7 961 565 228 16 16 chr17 49387180 49387305 -45885346 - B3A SINE B2 -73 125 1 7 961 287 303 18 9 chr17 49387314 49387332 -45885319 - PB1D9 SINE Alu -8 112 2 7 961 474 228 0 0 chr17 49387332 49387424 -45885227 - B4A SINE B4 -114 178 87 7 961 1476 94 162 134 chr17 49387732 49388052 -45884599 + ORR1A4 LTR MaLR 1 329 0 7 961 477 99 0 0 chr17 49389105 49389186 -45883465 + (TG)n Simple_repeat Simple_repeat 2 82 0 7 961 484 332 90 35 chr17 49389233 49389433 -45883218 - B4A SINE B4 -80 212 2 7 961 512 275 51 0 chr17 49389468 49389606 -45883045 - B1F1 SINE Alu -2 147 3 7 961 516 239 0 42 chr17 49389713 49389831 -45882820 + PB1D9 SINE Alu 2 114 -6 7 961 501 254 123 141 chr17 49390898 49391077 -45881574 - B4 SINE B4 0 292 97 7 961 462 36 0 0 chr17 49391077 49391133 -45881518 + (TG)n Simple_repeat Simple_repeat 2 57 0 7 961 501 254 123 141 chr17 49391133 49391237 -45881414 - B4 SINE B4 -196 96 14 7 961 238 235 0 0 chr17 49391270 49391321 -45881330 - ID_B1 SINE B4 -3 221 171 7 961 1868 223 12 35 chr17 49392113 49392541 -45880110 - BGLII_B LTR ERVK -23 418 1 7 961 571 269 42 48 chr17 49392709 49392877 -45879774 + B4A SINE B4 126 292 0 7 961 273 306 12 0 chr17 49393263 49393348 -45879303 - Lx8 LINE L1 -311 7162 7077 7 961 241 277 118 59 chr17 49393376 49393495 -45879156 - ORR1B1 LTR MaLR -231 143 18 7 961 836 285 26 15 chr17 49394480 49394751 -45877900 + B4A SINE B4 1 274 -18 7 961 833 87 0 16 chr17 49394757 49394886 -45877765 + (CAGAGA)n Simple_repeat Simple_repeat 4 130 0 7 961 224 208 42 0 chr17 49394889 49394937 -45877714 + GA-rich Low_complexity Low_complexity 4 53 0 7 961 384 238 29 129 chr17 49395487 49395627 -45877024 + B3A SINE B2 73 198 0 7 961 511 304 115 73 chr17 49396591 49397042 -45875609 + HAL1 LINE L1 1402 1871 -636 7 961 445 300 149 6 chr17 49397408 49397569 -45875082 + B4A SINE B4 105 288 -4 7 961 766 296 46 91 chr17 49397676 49397897 -45874754 - MER2 DNA MER2_type -3 342 137 7 961 1028 186 67 0 chr17 49397897 49398091 -45874560 + B3 SINE B2 3 209 -7 7 961 766 296 46 91 chr17 49398091 49398219 -45874432 - MER2 DNA MER2_type -209 136 9 7 961 206 293 10 0 chr17 49398616 49398715 -45873936 + CT-rich Low_complexity Low_complexity 2 101 0 7 961 489 236 84 108 chr17 49399245 49399411 -45873240 + B3 SINE B2 55 216 0 7 961 201 74 0 0 chr17 49399440 49399467 -45873184 + (A)n Simple_repeat Simple_repeat 1 27 0 7 961 477 0 0 0 chr17 49399828 49399881 -45872770 + (TC)n Simple_repeat Simple_repeat 2 54 0 7 961 528 16 0 0 chr17 49399881 49399941 -45872710 + (TG)n Simple_repeat Simple_repeat 2 62 0 7 961 436 200 0 0 chr17 49399947 49400027 -45872624 - B3A SINE B2 -45 153 74 7 961 351 239 0 0 chr17 49400131 49400198 -45872453 - B2_Mm2 SINE B2 -127 68 2 7 961 633 287 41 53 chr17 49400198 49400429 -45872222 - B4A SINE B4 -60 232 5 7 961 356 244 120 60 chr17 49400894 49401077 -45871574 + B3A SINE B2 1 194 -1 7 961 252 333 99 0 chr17 49401116 49401227 -45871424 - ERVL-E-int LTR ERVL -3691 1976 1855 7 961 312 295 98 0 chr17 49401483 49401595 -45871056 - LTR33C LTR ERVL -506 123 1 7 961 522 0 0 0 chr17 49401635 49401693 -45870958 + (GGGA)n Simple_repeat Simple_repeat 1 58 0 7 961 297 0 0 0 chr17 49401748 49401781 -45870870 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 961 434 349 56 36 chr17 49402128 49402431 -45870220 - L1M5 LINE L1 -850 5296 4988 7 961 508 263 85 7 chr17 49402486 49402639 -45870012 + B4A SINE B4 2 166 -126 7 961 261 158 37 0 chr17 49402675 49402757 -45869894 + GA-rich Low_complexity Low_complexity 1 85 0 7 961 522 0 0 0 chr17 49402770 49402828 -45869823 + (GGAA)n Simple_repeat Simple_repeat 3 60 0 7 961 298 305 70 21 chr17 49403158 49403355 -45869296 + ZP3AR Satellite Satellite 1 206 -22 7 961 509 279 37 0 chr17 49403325 49403461 -45869190 + ID_B1 SINE B4 14 154 -70 7 961 496 264 26 65 chr17 49403463 49403617 -45869034 + B3A SINE B2 6 153 -45 7 961 431 256 0 0 chr17 49403689 49403771 -45868880 + ID_B1 SINE B4 143 224 0 7 961 206 125 21 0 chr17 49403771 49403819 -45868832 + (CAAAAA)n Simple_repeat Simple_repeat 5 53 0 7 961 255 301 95 12 chr17 49404250 49404492 -45868159 - L1MD LINE L1 -1755 4391 4130 7 961 601 240 70 0 chr17 49404676 49404805 -45867846 + B3A SINE B2 2 139 -59 7 961 459 35 0 0 chr17 49405240 49405297 -45867354 + (CA)n Simple_repeat Simple_repeat 1 57 0 7 961 997 129 0 13 chr17 49405301 49405450 -45867201 + B1_Mus2 SINE Alu 1 147 0 7 961 29 47 0 0 chr17 49405468 49405511 -45867140 + AT_rich Low_complexity Low_complexity 1 43 0 7 961 445 246 143 32 chr17 49405780 49405969 -45866682 - B3 SINE B2 -5 211 2 7 961 405 0 0 0 chr17 49406155 49406200 -45866451 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 961 654 312 25 6 chr17 49406200 49406358 -45866293 - B3 SINE B2 -29 187 27 7 961 2157 88 3 65 chr17 49406578 49406917 -45865734 - ORR1A3 LTR MaLR -8 318 1 7 961 180 184 0 73 chr17 49406982 49407023 -45865628 + L2a LINE L2 3286 3323 -103 7 961 198 103 0 0 chr17 49407396 49407425 -45865226 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 961 591 15 0 0 chr17 49408015 49408083 -45864568 + (GA)n Simple_repeat Simple_repeat 1 68 0 7 961 321 282 0 26 chr17 49408777 49408835 -45863816 + polypyrimidine Low_complexity Low_complexity 55 110 0 7 961 1033 111 12 0 chr17 49408835 49409007 -45863644 + (TTCC)n Simple_repeat Simple_repeat 1 174 0 7 961 321 282 0 26 chr17 49409007 49409061 -45863590 + polypyrimidine Low_complexity Low_complexity 1 54 0 7 961 2283 109 19 0 chr17 49409818 49410138 -45862513 + ORR1A4 LTR MaLR 1 326 -3 7 961 333 117 0 0 chr17 49410138 49410198 -45862453 + (CA)n Simple_repeat Simple_repeat 2 61 0 7 961 193 180 11 11 chr17 49411258 49411348 -45861303 + (TA)n Simple_repeat Simple_repeat 2 91 0 8 961 308 250 148 0 chr17 49412489 49412597 -45860054 - MIRb SINE MIR -131 137 14 8 961 185 196 22 0 chr17 49412763 49412809 -45859842 + CT-rich Low_complexity Low_complexity 1 47 0 8 961 891 147 17 0 chr17 49412821 49412998 -45859653 + CT-rich Low_complexity Low_complexity 1 180 0 8 961 576 312 14 0 chr17 49413843 49413984 -45858667 + RSINE1 SINE B4 2 144 -21 8 961 192 158 0 0 chr17 49414007 49414045 -45858606 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 8 962 181 326 100 44 chr17 49415696 49415786 -45856865 - MIRc SINE MIR -114 154 60 8 962 481 266 27 8 chr17 49415786 49415923 -45856728 + B4 SINE B4 136 276 -16 8 962 205 182 0 0 chr17 49415939 49415983 -45856668 + CT-rich Low_complexity Low_complexity 2 45 0 8 962 185 364 45 0 chr17 49416030 49416118 -45856533 - MIRb SINE MIR -155 113 22 8 962 1541 201 146 0 chr17 49416192 49416555 -45856096 + MTD LTR MaLR 3 418 -1 8 962 1088 62 26 0 chr17 49417042 49417431 -45855220 + (TCTA)n Simple_repeat Simple_repeat 1 399 0 8 962 607 289 19 0 chr17 49417435 49417594 -45855057 - RSINE1 SINE B4 -1 164 3 8 962 311 286 0 45 chr17 49418665 49418753 -45853898 + Cheshire DNA MER1_type 175 258 -2162 8 962 1305 112 11 5 chr17 49419254 49419443 -45853208 + B2_Mm1t SINE B2 1 190 -3 8 962 333 118 0 0 chr17 49419444 49419495 -45853156 + (GAA)n Simple_repeat Simple_repeat 1 51 0 8 962 1094 47 0 75 chr17 49419538 49419698 -45852953 - RLTR10B2 LTR ERVK -200 165 18 8 962 274 29 0 0 chr17 49419712 49419747 -45852904 - RLTR10B2 LTR ERVK -256 36 2 8 962 1131 8 0 0 chr17 49419747 49419875 -45852776 + (GAA)n Simple_repeat Simple_repeat 3 130 0 8 962 1343 165 0 9 chr17 49419943 49420169 -45852482 - URR1B DNA MER1_type 0 225 2 8 962 435 283 13 74 chr17 49420175 49420324 -45852327 - MTEa LTR MaLR -239 140 1 8 962 549 336 42 14 chr17 49420338 49420552 -45852099 - ID_B1 SINE B4 0 224 5 8 962 832 286 64 46 chr17 49420832 49421114 -45851537 - MTE2b LTR MaLR -92 287 1 8 962 594 0 0 0 chr17 49421184 49421250 -45851401 + (TCC)n Simple_repeat Simple_repeat 2 67 0 8 962 499 169 22 0 chr17 49421253 49421342 -45851309 - B3 SINE B2 -125 91 1 8 962 351 286 71 0 chr17 49421383 49421481 -45851170 + RCHARR1 DNA MER1_type 25 129 -845 8 962 628 293 15 46 chr17 49421479 49421676 -45850975 + B3A SINE B2 8 198 0 8 962 616 324 81 14 chr17 49421674 49421884 -45850767 + RCHARR1 DNA MER1_type 102 325 -649 8 962 437 259 53 59 chr17 49421892 49422044 -45850607 - B3 SINE B2 0 216 66 8 962 2260 224 35 34 chr17 49422042 49422609 -45850042 + RCHARR1 DNA MER1_type 391 958 -16 8 962 258 32 0 0 chr17 49422702 49422733 -45849918 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8 962 378 0 0 0 chr17 49423216 49423258 -45849393 + (A)n Simple_repeat Simple_repeat 1 42 0 8 962 303 28 0 0 chr17 49423306 49423342 -45849309 + (GGA)n Simple_repeat Simple_repeat 3 38 0 8 962 333 0 0 0 chr17 49423705 49423742 -45848909 + (A)n Simple_repeat Simple_repeat 1 37 0 8 962 277 206 40 2 chr17 49424574 49424630 -45848021 - L2a LINE L2 -95 3331 3230 8 962 290 244 97 8 chr17 49424928 49425052 -45847599 - LTR37A LTR ERV1 -9 417 283 8 962 1034 232 117 12 chr17 49425092 49425349 -45847302 + ORR1E-int LTR MaLR 1132 1415 -165 8 962 1003 132 11 0 chr17 49425398 49425572 -45847079 + (TTC)n Simple_repeat Simple_repeat 1 176 0 8 962 197 137 0 38 chr17 49425574 49425627 -45847024 + (TCTCTG)n Simple_repeat Simple_repeat 6 56 0 8 962 506 194 11 0 chr17 49425642 49425817 -45846834 + (TCTCTG)n Simple_repeat Simple_repeat 2 178 0 8 962 279 0 0 0 chr17 49425820 49425851 -45846800 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 962 452 274 149 24 chr17 49425888 49426030 -45846621 + ORR1E-int LTR MaLR 1365 1527 -53 8 962 478 226 50 29 chr17 49426030 49426189 -45846462 + ORR1E LTR MaLR 1 150 -224 8 962 487 324 147 26 chr17 49426204 49426435 -45846216 + RMER15 LTR ERVL 275 533 -42 8 962 435 193 11 22 chr17 49426558 49426648 -45846003 - LTR37A LTR ERV1 -256 170 82 8 962 375 60 0 0 chr17 49427112 49427162 -45845489 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 962 518 43 14 0 chr17 49427165 49427234 -45845417 + (TG)n Simple_repeat Simple_repeat 2 71 0 8 962 677 227 32 0 chr17 49427241 49427395 -45845256 - B3A SINE B2 -38 160 2 8 962 552 264 59 84 chr17 49427426 49427629 -45845022 - B3A SINE B2 0 198 1 8 962 185 355 16 0 chr17 49427949 49428011 -45844640 + L2 LINE L2 2813 2875 -544 8 962 4219 168 92 75 chr17 49428078 49428951 -45843700 - RMER19B LTR ERVK -14 888 1 8 962 235 283 0 0 chr17 49428958 49429011 -45843640 - LTR16A LTR ERVL -124 327 275 8 962 323 298 50 113 chr17 49429589 49429748 -45842903 - MIR SINE MIR -5 257 109 8 962 262 337 59 0 chr17 49429943 49430044 -45842607 - MLT1I LTR MaLR 0 411 305 8 962 256 208 0 0 chr17 49430263 49430311 -45842340 + URR1B DNA MER1_type 178 225 0 8 962 240 370 0 0 chr17 49430410 49430545 -45842106 + C-rich Low_complexity Low_complexity 5 139 0 8 962 554 263 60 60 chr17 49430963 49431181 -45841470 + CR1_Mam LINE CR1 785 1002 -1202 8 962 585 52 0 0 chr17 49431456 49431533 -45841118 + (CA)n Simple_repeat Simple_repeat 1 77 0 8 962 589 287 68 11 chr17 49431738 49431914 -45840737 - B3A SINE B2 -12 186 1 8 962 566 293 37 121 chr17 49431929 49432067 -45840584 + Lx8 LINE L1 6871 7017 -456 8 962 962 169 6 0 chr17 49432067 49432227 -45840424 + U1 snRNA snRNA 2 162 -3 8 962 566 293 37 121 chr17 49432227 49432360 -45840291 + Lx8 LINE L1 7018 7119 -354 8 962 7794 181 42 44 chr17 49432439 49434778 -45837873 + Lx6 LINE L1 488 2825 -3055 8 962 10490 145 72 29 chr17 49434774 49435129 -45837522 + Lx6 LINE L1 3791 4201 -1679 8 962 3137 47 39 0 chr17 49435129 49435510 -45837141 - MTA_Mm LTR MaLR 0 396 1 8 962 10490 145 72 29 chr17 49435510 49435816 -45836835 + Lx6 LINE L1 4202 4553 -1327 8 962 261 0 0 0 chr17 49435816 49435845 -45836806 + (TAAG)n Simple_repeat Simple_repeat 1 29 0 8 962 10490 158 72 27 chr17 49435845 49437688 -45834963 + Lx6 LINE L1 4554 6422 -1038 8 962 3282 217 30 36 chr17 49437687 49437855 -45834796 + Lx6 LINE L1 6565 6732 -728 8 962 477 0 0 0 chr17 49437855 49437908 -45834743 + (GA)n Simple_repeat Simple_repeat 2 54 0 8 962 3282 217 30 36 chr17 49437908 49438307 -45834344 + Lx6 LINE L1 6733 7138 -322 8 962 237 65 0 0 chr17 49438307 49438338 -45834313 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 8 962 1163 83 0 0 chr17 49438338 49438483 -45834168 - B1_Mm SINE Alu -2 145 1 8 962 3282 217 30 36 chr17 49438483 49438636 -45834015 + Lx6 LINE L1 7139 7281 -179 8 962 450 243 0 5 chr17 49438634 49438759 -45833892 + L1_Mur3 LINE L1 5348 5468 -409 8 962 243 0 0 0 chr17 49438951 49438978 -45833673 + (CA)n Simple_repeat Simple_repeat 1 27 0 8 962 873 273 39 51 chr17 49439315 49439570 -45833081 + B4 SINE B4 41 292 0 8 962 405 279 39 46 chr17 49440236 49440380 -45832271 - MTEb LTR MaLR -65 314 152 8 962 692 198 28 46 chr17 49440389 49440543 -45832108 - ORR1D2 LTR MaLR -5 389 234 8 962 861 241 132 23 chr17 49440567 49440839 -45831812 - ORR1D2 LTR MaLR -101 269 1 8 962 488 267 121 8 chr17 49440839 49440970 -45831681 - ORR1E LTR MaLR -208 151 6 8 962 186 43 0 0 chr17 49441015 49441038 -45831613 + (TG)n Simple_repeat Simple_repeat 2 24 0 8 962 3626 57 7 15 chr17 49441051 49441512 -45831139 - L1_Mus1 LINE L1 -1 6566 6110 8 962 187 288 84 70 chr17 49441786 49441928 -45830723 - L2c LINE L2 -151 3236 3093 8 962 180 111 0 0 chr17 49442465 49442492 -45830159 + (T)n Simple_repeat Simple_repeat 1 27 0 8 962 288 160 0 20 chr17 49442636 49442687 -45829964 - MTEb LTR MaLR -329 50 1 8 962 233 179 11 35 chr17 49442932 49443019 -45829632 + GA-rich Low_complexity Low_complexity 4 88 0 8 962 225 259 93 0 chr17 49443038 49443092 -45829559 - LTR16B2 LTR ERVL -284 178 120 8 962 270 353 45 0 chr17 49443204 49443337 -45829314 - MIRm SINE MIR -85 191 53 8 962 279 331 24 30 chr17 49443635 49443800 -45828851 + CT-rich Low_complexity Low_complexity 4 167 0 8 962 258 105 0 0 chr17 49443849 49443887 -45828764 + (TCCC)n Simple_repeat Simple_repeat 3 40 0 8 962 294 228 51 18 chr17 49445080 49445189 -45827462 + MER5A1 DNA MER1_type 1 121 -45 8 962 2112 198 7 10 chr17 49445846 49446264 -45826387 - MTD LTR MaLR -2 417 1 8 962 1977 141 6 3 chr17 49446387 49446707 -45825944 - ORR1A4 LTR MaLR -8 321 1 8 962 180 111 0 0 chr17 49447045 49447072 -45825579 + (TA)n Simple_repeat Simple_repeat 2 28 0 8 962 512 162 60 0 chr17 49447079 49447196 -45825455 - MT2A LTR ERVL -1 532 409 8 962 715 198 6 90 chr17 49447198 49447376 -45825275 + RLTR11A LTR ERVK 7 169 -359 8 962 215 31 31 0 chr17 49447825 49447857 -45824794 + (TTG)n Simple_repeat Simple_repeat 1 33 0 8 962 188 131 0 21 chr17 49449096 49449143 -45823508 + A-rich Low_complexity Low_complexity 2 47 0 8 962 369 0 0 0 chr17 49450535 49450576 -45822075 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 962 342 0 0 0 chr17 49450576 49450613 -45822038 + (GA)n Simple_repeat Simple_repeat 1 38 0 8 962 1478 191 102 8 chr17 49450928 49451292 -45821359 - MTD LTR MaLR -9 410 13 8 962 1975 145 126 21 chr17 49451383 49451764 -45820887 - MTC LTR MaLR 0 421 1 8 962 2208 137 57 5 chr17 49452576 49452943 -45819708 + ORR1B1 LTR MaLR 1 386 -8 8 962 860 253 145 53 chr17 49453028 49453462 -45819189 - Lx8 LINE L1 -144 7329 6856 8 962 367 309 8 31 chr17 49454239 49454369 -45818282 - B1_Mm SINE Alu -20 127 1 8 962 304 355 82 4 chr17 49454951 49455194 -45817457 - MER21B LTR ERV1 -107 756 495 8 962 547 285 99 50 chr17 49455240 49455349 -45817302 - MER21B LTR ERV1 -559 304 193 8 962 4291 156 11 4 chr17 49455349 49456062 -45816589 - Lx LINE L1 -1 6653 5936 8 962 547 285 99 50 chr17 49456062 49456214 -45816437 - MER21B LTR ERV1 -671 192 30 8 962 624 216 14 28 chr17 49457123 49457266 -45815385 - B1_Mur2 SINE Alu -8 141 1 8 962 240 267 70 79 chr17 49457382 49457496 -45815155 + PB1D10 SINE Alu 1 113 -4 8 962 354 282 114 8 chr17 49458663 49458795 -45813856 + RSINE1 SINE B4 18 163 -2 8 962 1983 185 210 8 chr17 49459675 49460170 -45812481 - RMER19B LTR ERVK 0 902 308 8 962 535 304 74 58 chr17 49460452 49460815 -45811836 - ORR1D2 LTR MaLR 0 370 2 8 962 1330 82 0 37 chr17 49460925 49461116 -45811535 - B2_Mm2 SINE B2 -9 186 3 8 962 2278 144 67 5 chr17 49461821 49462192 -45810459 + ORR1B1 LTR MaLR 1 394 0 8 962 498 33 0 0 chr17 49462848 49462908 -45809743 + (TG)n Simple_repeat Simple_repeat 1 60 0 8 962 259 257 162 0 chr17 49463228 49463364 -45809287 - HERV16-int LTR ERVL -2269 2727 2570 9 962 283 323 81 0 chr17 49463453 49463577 -45809074 + RMER15 LTR ERVL 424 557 -18 9 962 968 213 29 15 chr17 49463867 49464072 -45808579 + B3 SINE B2 3 210 -6 9 962 932 231 83 45 chr17 49465017 49465353 -45807298 - ORR1E LTR MaLR 0 359 11 9 962 626 327 89 39 chr17 49465721 49466054 -45806597 + MTEa LTR MaLR 6 355 -24 9 962 830 299 22 58 chr17 49466054 49466419 -45806232 + MTEa-int LTR MaLR 1 352 -1228 9 962 371 303 99 20 chr17 49466431 49466633 -45806018 + MTEa-int LTR MaLR 869 1086 -494 9 962 22 0 0 0 chr17 49466643 49466665 -45805986 + AT_rich Low_complexity Low_complexity 1 22 0 9 962 1843 192 65 59 chr17 49466678 49466717 -45805934 - RLTR20B3 LTR ERVK -56 521 473 9 962 486 0 0 0 chr17 49466717 49466771 -45805880 + (CA)n Simple_repeat Simple_repeat 1 54 0 9 962 1843 192 65 59 chr17 49466771 49467239 -45805412 - RLTR20B3 LTR ERVK -105 472 12 9 962 772 338 77 52 chr17 49467227 49467708 -45804943 + MTEa-int LTR MaLR 1081 1573 -7 9 962 1177 41 7 14 chr17 49467856 49468004 -45804647 - B1_Mus1 SINE Alu 0 148 2 9 962 1646 138 108 15 chr17 49468246 49468570 -45804081 - ORR1B1 LTR MaLR 0 394 41 9 962 500 283 108 47 chr17 49469557 49469843 -45802808 + RMER13A LTR ERVK 186 466 -394 9 962 2165 220 47 31 chr17 49471057 49471568 -45801083 - RMER1C Other Other -3 1339 821 9 962 238 369 36 0 chr17 49471614 49471698 -45800953 - RMER1C Other Other -1202 140 54 9 962 1712 272 20 46 chr17 49472083 49472668 -45799983 - RMER15 LTR ERVL 0 575 6 9 962 232 297 54 0 chr17 49472879 49472990 -45799661 - MMSAT4 Satellite Satellite -3 165 49 9 962 719 222 0 22 chr17 49475127 49475265 -45797386 - B1_Mus2 SINE Alu -8 139 5 9 962 354 235 112 48 chr17 49475444 49475569 -45797082 + MTE2a LTR MaLR 5 137 -242 9 962 280 319 93 53 chr17 49475569 49475669 -45796982 + MT2A LTR ERVL 5 238 -295 9 962 241 150 0 0 chr17 49475830 49475870 -45796781 - MTC LTR MaLR -381 40 1 9 962 476 289 33 0 chr17 49477773 49477894 -45794757 - B1_Mur1 SINE Alu -24 125 1 9 962 477 0 0 0 chr17 49478012 49478065 -45794586 + (TTA)n Simple_repeat Simple_repeat 3 55 0 9 962 214 245 38 0 chr17 49478405 49478458 -45794193 - RSINE1 SINE B4 -19 146 92 9 962 572 250 52 0 chr17 49478805 49478941 -45793710 - ID_B1 SINE B4 -80 144 2 9 962 243 282 70 12 chr17 49479239 49479325 -45793326 - RSINE1 SINE B4 -72 93 3 9 962 833 231 141 117 chr17 49479661 49480116 -45792535 + MTD-int LTR MaLR 578 1043 -215 9 962 420 197 108 62 chr17 49480123 49480253 -45792398 + B1_Mur4 SINE Alu 2 137 -13 9 962 261 0 0 0 chr17 49480257 49480286 -45792365 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 9 962 228 245 70 60 chr17 49480329 49480429 -45792222 + MTD-int LTR MaLR 1158 1258 0 9 962 1251 190 184 15 chr17 49480430 49480761 -45791890 + MTD LTR MaLR 2 388 -31 9 962 1191 193 305 62 chr17 49481038 49481491 -45791160 + RMER2 LTR ERV1 1 563 -4 9 962 353 137 0 27 chr17 49482175 49482249 -45790402 + MMERGLN-int LTR ERV1 1304 1357 -6199 9 962 387 0 0 0 chr17 49482249 49482292 -45790359 + (TAAAA)n Simple_repeat Simple_repeat 1 43 0 9 962 274 295 39 39 chr17 49482374 49482529 -45790122 + MMERGLN-int LTR ERV1 1806 1960 -5818 9 962 469 279 70 28 chr17 49483080 49483294 -45789357 + MuLV-int LTR ERV1 3437 3659 -3793 9 962 482 336 24 38 chr17 49483298 49483681 -45788970 + MuLV-int LTR ERV1 3796 4191 -3415 9 962 1196 226 75 14 chr17 49484025 49484303 -45788348 - MTEa LTR MaLR 0 379 85 9 962 210 341 0 24 chr17 49484417 49484501 -45788150 + B3 SINE B2 1 82 -134 9 962 601 285 8 0 chr17 49484430 49484560 -45788091 + RSINE1 SINE B4 13 143 -22 9 962 613 286 0 25 chr17 49484836 49484994 -45787657 + RSINE1 SINE B4 12 165 0 9 962 300 27 0 0 chr17 49485816 49485853 -45786798 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 9 962 432 0 0 0 chr17 49485854 49485902 -45786749 + (TG)n Simple_repeat Simple_repeat 2 49 0 9 962 404 333 67 0 chr17 49485905 49486010 -45786641 - RSINE1 SINE B4 -26 139 28 9 962 311 354 85 18 chr17 49486155 49486319 -45786332 - LTR16E2 LTR ERVL -14 554 380 9 962 1168 286 44 8 chr17 49487197 49487557 -45785094 + MTE2b LTR MaLR 1 373 -6 9 962 2323 96 6 6 chr17 49487558 49487883 -45784768 - ORR1A2 LTR MaLR -2 325 1 9 962 243 0 0 0 chr17 49488460 49488487 -45784164 + (CA)n Simple_repeat Simple_repeat 2 28 0 9 962 772 298 26 29 chr17 49489195 49489468 -45783183 - B4 SINE B4 -18 274 3 9 962 249 224 145 0 chr17 49492087 49492163 -45780488 + B3A SINE B2 3 89 -109 9 962 357 268 23 39 chr17 49492160 49492288 -45780363 + MTEa LTR MaLR 249 374 -5 9 962 329 253 284 38 chr17 49492577 49492918 -45779733 - L1M5 LINE L1 -3215 2931 2507 9 962 1096 214 37 58 chr17 49493236 49493564 -45779087 - RLTR20B3 LTR ERVK -236 341 21 9 962 1371 180 132 28 chr17 49495317 49495643 -45777008 + RMER1B Other Other 551 910 -156 9 962 305 309 0 49 chr17 49495631 49495733 -45776918 + RMER1B Other Other 38 134 -932 9 962 2370 212 19 65 chr17 49495891 49496477 -45776174 + RMER1C Other Other 782 1340 -2 9 962 667 271 171 44 chr17 49496832 49497264 -45775387 + RMER5 LTR ERV1 48 534 0 9 962 507 107 0 0 chr17 49497337 49497412 -45775239 + (TG)n Simple_repeat Simple_repeat 2 76 0 9 962 642 247 146 9 chr17 49497712 49497945 -45774706 - Lx8 LINE L1 -317 7156 6892 9 962 747 156 181 0 chr17 49498668 49498828 -45773823 - B3 SINE B2 -13 203 15 9 962 25 0 0 0 chr17 49498834 49498859 -45773792 + AT_rich Low_complexity Low_complexity 1 25 0 9 962 2752 173 83 55 chr17 49499146 49499997 -45772654 - RLTR13D1 LTR ERVK 0 855 53 9 962 246 184 0 75 chr17 49500000 49500053 -45772598 - RLTR13B1 LTR ERVK -844 49 1 1 962 1528 194 42 0 chr17 49500053 49500382 -45772269 - ORR1D1 LTR MaLR -31 343 1 2 962 563 257 0 9 chr17 49500550 49500664 -45771987 + B3A SINE B2 1 113 -85 3 962 619 275 214 9 chr17 49501136 49501470 -45771181 + RMER5 LTR ERV1 67 468 -66 4 962 583 286 15 30 chr17 49501514 49501712 -45770939 + B3A SINE B2 1 195 -3 5 962 300 111 0 0 chr17 49502163 49502208 -45770443 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 962 1273 190 84 42 chr17 49502209 49502566 -45770085 - RMER5 LTR ERV1 -21 513 142 7 962 278 224 0 216 chr17 49503275 49503359 -45769292 - B3A SINE B2 -100 98 38 8 962 963 63 0 144 chr17 49503359 49503526 -45769125 - B1_Mus2 SINE Alu -3 144 2 9 962 278 224 0 216 chr17 49503526 49503566 -45769085 - B3A SINE B2 -161 37 1 8 962 560 315 152 25 chr17 49503820 49504188 -45768463 - Charlie7 DNA MER1_type -1421 1191 777 1 962 21 57 0 0 chr17 49505036 49505071 -45767580 + AT_rich Low_complexity Low_complexity 1 35 0 1 962 306 319 50 106 chr17 49505257 49505436 -45767215 - B4A SINE B4 -118 174 6 1 962 618 68 0 0 chr17 49505463 49505551 -45767100 + (CA)n Simple_repeat Simple_repeat 1 88 0 1 962 322 336 47 73 chr17 49505727 49506067 -45766584 - Kanga2_a DNA Tc2 -527 361 31 1 962 583 264 115 6 chr17 49506353 49506536 -45766115 + B3 SINE B2 1 203 -13 1 962 453 257 13 83 chr17 49507346 49507503 -45765148 + MTE2b LTR MaLR 90 235 -144 1 962 237 252 138 37 chr17 49507529 49507747 -45764904 - RMER17C LTR ERVK -105 305 66 1 962 513 215 42 3 chr17 49507849 49507991 -45764660 + MTE2b LTR MaLR 224 419 0 1 962 641 282 146 4 chr17 49508083 49508329 -45764322 + MER21B LTR ERV1 60 340 -523 1 962 1808 120 70 25 chr17 49508474 49508832 -45763819 - RMER10B LTR ERVL 0 398 25 1 962 963 283 201 18 chr17 49508859 49509721 -45762930 - L1M4 LINE L1 -2639 3507 2487 2 962 599 222 105 23 chr17 49509752 49509923 -45762728 + ORR1E LTR MaLR 1 185 -174 2 962 282 56 0 0 chr17 49510213 49510249 -45762402 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2 962 602 247 62 31 chr17 49510377 49510569 -45762082 - B3A SINE B2 0 198 1 2 962 1152 256 27 7 chr17 49510960 49511255 -45761396 - MTE2b LTR MaLR -3 376 76 2 962 340 335 60 7 chr17 49511257 49511407 -45761244 + Lx7 LINE L1 7142 7299 -397 2 962 254 226 9 0 chr17 49511441 49511547 -45761104 + CT-rich Low_complexity Low_complexity 2 108 0 2 962 1038 32 0 0 chr17 49511548 49511674 -45760977 + (CA)n Simple_repeat Simple_repeat 2 127 0 2 962 325 333 65 22 chr17 49512050 49512188 -45760463 - LTR33A LTR ERVL -251 269 126 2 962 256 166 48 101 chr17 49514139 49514327 -45758324 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 2 962 1190 127 52 0 chr17 49514513 49514725 -45757926 + ORR1B2 LTR MaLR 137 359 -8 3 962 500 266 111 23 chr17 49515049 49515301 -45757350 - MLT1A0 LTR MaLR -34 374 56 3 962 213 266 154 15 chr17 49515318 49515383 -45757268 + B3A SINE B2 1 74 -124 3 962 1212 83 0 0 chr17 49515386 49515662 -45756989 + (CA)n Simple_repeat Simple_repeat 1 276 0 3 962 231 36 0 0 chr17 49516906 49516934 -45755717 + (AGGGGG)n Simple_repeat Simple_repeat 6 33 0 3 962 796 246 119 13 chr17 49517497 49517724 -45754927 + ORR1D2 LTR MaLR 2 252 -118 3 962 465 199 0 17 chr17 49517923 49518097 -45754554 + (TG)n Simple_repeat Simple_repeat 1 171 0 3 962 844 268 1 6 chr17 49518107 49518310 -45754341 - B3A SINE B2 -22 194 1 3 962 304 243 0 13 chr17 49518410 49518485 -45754166 - B3A SINE B2 -68 130 57 3 962 819 248 128 28 chr17 49519434 49519761 -45752890 + RMER13A LTR ERVK 95 454 -406 3 962 804 208 73 77 chr17 49520205 49520466 -45752185 + ORR1E LTR MaLR 62 321 -38 4 962 268 43 43 0 chr17 49520473 49520519 -45752132 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 4 962 304 226 36 81 chr17 49520550 49520661 -45751990 + L1ME2z LINE L1 6039 6144 -300 4 962 266 372 20 20 chr17 49521618 49521766 -45750885 + MTEa LTR MaLR 1 148 -231 4 962 567 294 34 6 chr17 49521812 49521990 -45750661 + MT2A LTR ERVL 279 461 -72 4 962 210 191 0 0 chr17 49522980 49523027 -45749624 + C-rich Low_complexity Low_complexity 1 47 0 4 962 898 228 14 50 chr17 49523128 49523350 -45749301 - ID_B1 SINE B4 -3 221 8 4 962 366 42 0 0 chr17 49524545 49524593 -45748058 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 962 308 326 56 14 chr17 49524612 49524755 -45747896 + RMER5 LTR ERV1 40 188 -346 4 962 694 266 98 38 chr17 49525221 49525487 -45747164 + B4 SINE B4 11 292 0 4 962 237 175 195 24 chr17 49525699 49525781 -45746870 + LTR40b LTR ERVL 351 446 -16 5 962 674 216 0 2 chr17 49525928 49526393 -45746258 + (TG)n Simple_repeat Simple_repeat 1 463 0 5 962 594 237 47 94 chr17 49526393 49526584 -45746067 - B3A SINE B2 -16 182 1 5 962 595 271 135 41 chr17 49526586 49527002 -45745649 + L1M5 LINE L1 4081 4535 -1611 5 962 751 234 81 5 chr17 49527170 49527368 -45745283 + B3 SINE B2 4 216 0 5 962 804 258 45 0 chr17 49527790 49527988 -45744663 + B3 SINE B2 1 207 -9 5 962 264 30 0 0 chr17 49528779 49528812 -45743839 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 962 678 194 89 58 chr17 49529007 49529198 -45743453 + B3A SINE B2 2 198 0 5 962 691 289 73 38 chr17 49529696 49530013 -45742638 - L1MA4 LINE L1 -280 6020 5693 5 962 1272 272 31 74 chr17 49530027 49530539 -45742112 + RMER5 LTR ERV1 1 490 -44 5 962 241 250 47 0 chr17 49530599 49530663 -45741988 - L1MA4 LINE L1 -642 5670 5604 5 962 489 14 43 0 chr17 49530686 49530756 -45741895 + (TC)n Simple_repeat Simple_repeat 1 73 0 6 962 243 0 0 0 chr17 49530756 49530782 -45741869 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 962 325 259 67 24 chr17 49530804 49530961 -45741690 - L1MA4 LINE L1 -707 5596 5377 5 962 201 39 0 0 chr17 49531213 49531239 -45741412 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 962 296 307 44 0 chr17 49531698 49531812 -45740839 + RMER15 LTR ERVL 380 498 -77 6 962 231 278 29 49 chr17 49532285 49532387 -45740264 - LTR16C LTR ERVL -29 460 361 6 962 199 229 0 41 chr17 49532389 49532462 -45740189 + G-rich Low_complexity Low_complexity 2 71 0 6 962 728 267 38 34 chr17 49532573 49532782 -45739869 + B3A SINE B2 2 211 -5 6 962 1708 231 52 5 chr17 49532873 49533260 -45739391 + MTD LTR MaLR 15 419 0 6 962 725 256 20 25 chr17 49533447 49533643 -45739008 + B3A SINE B2 1 195 -3 6 962 366 23 0 0 chr17 49534208 49534251 -45738400 + (CATA)n Simple_repeat Simple_repeat 4 46 0 6 962 586 278 9 108 chr17 49534293 49534507 -45738144 - B3A SINE B2 -5 193 1 7 962 238 247 11 56 chr17 49534758 49534848 -45737803 - MLT1A0 LTR MaLR 0 365 280 7 962 402 198 113 24 chr17 49535001 49535125 -45737526 - MLT1A0 LTR MaLR -230 135 1 7 962 334 279 197 45 chr17 49535215 49535504 -45737147 - MLT1F LTR MaLR -79 469 137 7 962 601 209 24 66 chr17 49535506 49535682 -45736969 + B3A SINE B2 1 164 -31 7 962 432 55 0 0 chr17 49535735 49535790 -45736861 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 962 473 120 0 12 chr17 49535790 49535873 -45736778 + (TA)n Simple_repeat Simple_repeat 1 83 0 7 962 333 118 0 0 chr17 49535874 49535925 -45736726 + (GA)n Simple_repeat Simple_repeat 2 52 0 7 962 283 289 0 0 chr17 49535948 49536024 -45736627 - MLT1F LTR MaLR -472 76 1 7 962 600 53 0 0 chr17 49536535 49536611 -45736040 + (CACCAT)n Simple_repeat Simple_repeat 5 80 0 7 962 2489 150 66 17 chr17 49537456 49537797 -45734854 - RMER4B LTR ERVK -90 495 130 7 962 2407 194 20 28 chr17 49537797 49538306 -45734345 + RLTR16 LTR ERVK 1 505 0 7 962 2489 150 66 17 chr17 49538306 49538432 -45734219 - RMER4B LTR ERVK -456 129 5 7 962 621 0 0 0 chr17 49538769 49538838 -45733813 + (GA)n Simple_repeat Simple_repeat 2 70 0 8 962 2905 41 0 92 chr17 49540502 49540904 -45731747 + RLTR10B2 LTR ERVK 1 365 0 8 962 408 40 0 0 chr17 49541318 49541368 -45731283 + (TC)n Simple_repeat Simple_repeat 1 50 0 8 962 648 301 40 0 chr17 49541369 49541542 -45731109 - B3A SINE B2 -18 180 1 8 962 486 348 11 27 chr17 49541998 49542181 -45730470 - B3A SINE B2 -17 181 2 8 962 378 247 16 152 chr17 49542691 49542803 -45729848 + MTEa LTR MaLR 202 293 -86 8 962 1029 178 69 10 chr17 49542803 49543007 -45729644 - B3 SINE B2 0 216 1 8 962 378 247 16 152 chr17 49543007 49543085 -45729566 + MTEa LTR MaLR 294 366 -13 8 962 846 172 0 0 chr17 49543551 49543708 -45728943 + T-rich Low_complexity Low_complexity 3 159 0 8 962 399 313 22 32 chr17 49543860 49544045 -45728606 + HAL1 LINE L1 1381 1563 -944 8 962 627 186 15 15 chr17 49544697 49544828 -45727823 + B3A SINE B2 12 142 -56 8 120 384 266 49 21 chr17 49545170 49545312 -45727339 + B4A SINE B4 3 148 -144 9 963 727 102 17 17 chr17 49546443 49546563 -45726088 - B1_Mur4 SINE Alu -1 149 30 9 963 363 140 2 0 chr17 49546565 49546630 -45726021 - B3A SINE B2 -125 68 3 9 963 292 236 124 16 chr17 49547181 49547310 -45725341 + MER104 DNA Tc2 36 178 -3 9 963 453 276 89 7 chr17 49548158 49548304 -45724347 - B3 SINE B2 -56 160 3 9 963 21 0 0 0 chr17 49548398 49548419 -45724232 + AT_rich Low_complexity Low_complexity 1 21 0 9 963 406 266 97 0 chr17 49548433 49548557 -45724094 + B1_Mur2 SINE Alu 4 139 -10 9 963 564 265 92 51 chr17 49548573 49548768 -45723883 + B3 SINE B2 3 205 -11 9 963 865 305 73 12 chr17 49549220 49549619 -45723032 + MT2A LTR ERVL 111 533 0 9 963 1749 241 25 2 chr17 49549715 49550122 -45722529 + MTD LTR MaLR 4 419 0 9 963 785 267 21 81 chr17 49550855 49551140 -45721511 + B4 SINE B4 2 269 -23 1 963 419 0 20 0 chr17 49551140 49551191 -45721460 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 963 249 308 73 49 chr17 49551706 49551812 -45720839 + LTR16D1 LTR ERVL 335 443 -232 1 963 320 314 0 122 chr17 49551812 49552008 -45720643 + Charlie12 DNA MER1_type 3 174 -2699 1 963 502 289 43 52 chr17 49552500 49552730 -45719921 - MTE2b LTR MaLR -151 228 1 1 963 294 298 53 15 chr17 49552779 49552912 -45719739 - L1MA4 LINE L1 -123 6177 6040 1 963 608 229 175 0 chr17 49552971 49553154 -45719497 - B3 SINE B2 0 216 2 1 963 1533 289 148 15 chr17 49553162 49554279 -45718372 - L1M5 LINE L1 -729 5433 4171 1 963 451 282 90 6 chr17 49554282 49554460 -45718191 + Kanga1b DNA Tc2 566 758 -21 1 963 401 264 147 25 chr17 49554735 49554898 -45717753 - LTR40a LTR ERVL -6 513 331 1 963 785 257 44 0 chr17 49555195 49555401 -45717250 + B3 SINE B2 2 216 0 1 963 324 0 0 0 chr17 49555947 49555983 -45716668 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 963 954 0 0 0 chr17 49556115 49556221 -45716430 + (TCTCCC)n Simple_repeat Simple_repeat 3 108 0 1 963 519 278 81 22 chr17 49556659 49556795 -45715856 + B3A SINE B2 11 154 -44 1 963 450 0 0 0 chr17 49556796 49556846 -45715805 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 963 234 0 0 0 chr17 49556846 49556871 -45715780 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 963 225 0 0 0 chr17 49556908 49556933 -45715718 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 963 860 263 0 35 chr17 49556938 49557111 -45715540 - B3A SINE B2 -30 168 2 1 963 325 213 0 85 chr17 49557291 49557373 -45715278 - RMER21B LTR ERV1 -112 835 761 1 963 740 212 106 43 chr17 49557383 49557590 -45715061 - RMER21B LTR ERV1 -277 565 346 1 963 398 247 0 70 chr17 49557748 49557848 -45714803 - RMER4B LTR ERVK -135 450 358 1 963 5364 196 21 13 chr17 49557848 49558908 -45713743 - RodERV21-int LTR ERV1 -158 4833 3766 1 963 386 335 50 43 chr17 49558942 49559223 -45713428 - RodERV21-int LTR ERV1 -1547 3444 3162 1 963 407 202 17 42 chr17 49560040 49560159 -45712492 - RLTR19-int LTR ERVK -4931 1206 1091 1 963 620 195 59 30 chr17 49560548 49560717 -45711934 - RodERV21-int LTR ERV1 -2280 2711 2538 1 963 289 217 12 0 chr17 49560723 49560806 -45711845 + (TA)n Simple_repeat Simple_repeat 1 84 0 1 963 266 257 0 14 chr17 49560813 49560884 -45711767 + ORR1B1 LTR MaLR 1 70 -259 1 963 1077 61 0 0 chr17 49560877 49561008 -45711643 + B1_Mus1 SINE Alu 6 136 -12 1 963 207 0 0 0 chr17 49561009 49561032 -45711619 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 963 711 168 38 0 chr17 49561032 49561163 -45711488 + ORR1B1 LTR MaLR 81 216 -178 1 963 1064 253 20 0 chr17 49561164 49561413 -45711238 - RodERV21-int LTR ERV1 -4720 271 18 1 963 526 254 181 12 chr17 49561488 49561659 -45710992 - RMER21B LTR ERV1 -270 572 373 1 963 232 290 50 10 chr17 49561699 49561800 -45710851 - RMER21B LTR ERV1 -648 194 90 1 963 921 232 6 0 chr17 49562659 49562807 -45709844 + B3A SINE B2 1 148 -50 1 963 360 64 0 0 chr17 49562807 49562854 -45709797 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 963 921 189 39 113 chr17 49562854 49562884 -45709767 + B3A SINE B2 138 169 -26 1 963 545 25 38 0 chr17 49562884 49562963 -45709688 - L1Md_F3 LINE L1 -1 6583 6502 1 963 719 189 39 113 chr17 49562963 49562986 -45709665 + B2_Mm2 SINE B2 170 188 -7 1 963 287 256 72 12 chr17 49563110 49563193 -45709458 + MIR SINE MIR 27 114 -148 1 963 304 263 68 29 chr17 49563299 49563422 -45709229 - MIRc SINE MIR -139 129 2 1 963 756 42 0 0 chr17 49563697 49563793 -45708858 + (TC)n Simple_repeat Simple_repeat 1 96 0 1 963 360 0 0 0 chr17 49563793 49563832 -45708819 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 963 817 328 50 23 chr17 49564022 49564284 -45708367 - B4A SINE B4 -17 275 7 1 963 882 201 45 5 chr17 49564298 49564498 -45708153 - RodERV21-int LTR ERV1 -4544 447 240 1 963 348 280 232 7 chr17 49564498 49564649 -45708002 - B4A SINE B4 -78 214 30 1 963 1281 77 43 11 chr17 49566407 49566591 -45706060 + RLTR15 LTR ERVK 170 359 0 1 963 815 228 82 5 chr17 49567039 49567233 -45705418 + B3 SINE B2 1 209 -7 1 963 621 187 0 9 chr17 49567287 49567400 -45705251 + B1F2 SINE Alu 23 134 -15 1 963 235 315 64 89 chr17 49567400 49567444 -45705207 + MT2B LTR ERVL 187 339 -262 1 963 452 93 13 0 chr17 49570192 49570267 -45702384 + (TG)n Simple_repeat Simple_repeat 2 77 0 1 963 550 264 127 5 chr17 49570270 49570479 -45702172 - B4 SINE B4 0 292 28 1 963 455 223 76 19 chr17 49570482 49570587 -45702064 - MTE2b LTR MaLR -268 111 1 1 963 1068 109 0 0 chr17 49570751 49570898 -45701753 + B1_Mus1 SINE Alu 2 148 0 1 963 261 139 0 0 chr17 49570898 49570941 -45701710 + (A)n Simple_repeat Simple_repeat 1 43 0 1 963 316 238 62 0 chr17 49571129 49571209 -45701442 - RMER30 DNA MER1_type -16 186 102 1 963 298 291 0 23 chr17 49571251 49571339 -45701312 - RMER30 DNA MER1_type -101 101 16 1 963 399 309 43 96 chr17 49573312 49573407 -45699244 + RMER30 DNA MER1_type 5 90 -112 1 963 234 0 0 0 chr17 49573407 49573433 -45699218 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 963 617 305 81 56 chr17 49573439 49573724 -45698927 + B4 SINE B4 1 292 0 1 963 399 309 43 96 chr17 49573724 49573829 -45698822 + RMER30 DNA MER1_type 91 201 -1 1 963 21 0 0 0 chr17 49575118 49575139 -45697512 + GC_rich Low_complexity Low_complexity 1 21 0 1 963 837 232 12 0 chr17 49575139 49575303 -45697348 - B3A SINE B2 -31 167 2 1 963 190 239 14 14 chr17 49575799 49575871 -45696780 + (TA)n Simple_repeat Simple_repeat 2 73 0 1 963 435 174 23 0 chr17 49575902 49575988 -45696663 - ID_B1 SINE B4 -1 223 136 1 963 2253 190 7 19 chr17 49576521 49576793 -45695858 + MTC LTR MaLR 14 288 -133 1 963 3343 28 20 5 chr17 49576793 49577183 -45695468 + MTA_Mm LTR MaLR 1 396 0 1 963 2253 190 7 19 chr17 49577183 49577323 -45695328 + MTC LTR MaLR 289 421 0 1 963 1264 263 0 25 chr17 49577892 49578169 -45694482 + B4A SINE B4 2 271 -21 1 963 456 288 41 30 chr17 49578407 49578604 -45694047 - B3 SINE B2 -13 203 5 1 963 31 26 0 0 chr17 49579463 49579501 -45693150 + AT_rich Low_complexity Low_complexity 1 38 0 1 963 897 264 42 21 chr17 49579536 49579772 -45692879 - B4 SINE B4 -7 285 45 1 963 377 241 64 57 chr17 49580306 49580447 -45692204 + MER58D DNA MER1_type 59 200 -186 1 963 6401 58 30 19 chr17 49580519 49581365 -45691286 - RLTR13A LTR ERVK 0 855 1 1 963 45548 34 7 10 chr17 49581373 49587183 -45685468 - ETnERV3-int LTR ERVK -11 5797 3 1 963 6401 58 30 19 chr17 49587185 49588031 -45684620 - RLTR13A LTR ERVK 0 855 1 1 963 259 211 70 0 chr17 49588031 49588102 -45684549 + B3 SINE B2 141 216 0 1 963 501 229 126 30 chr17 49590906 49591041 -45681610 + B1F1 SINE Alu 2 149 0 1 963 567 78 0 0 chr17 49592471 49592548 -45680103 + (TG)n Simple_repeat Simple_repeat 2 78 0 1 963 357 86 0 0 chr17 49592550 49592608 -45680043 + (GA)n Simple_repeat Simple_repeat 2 59 0 1 963 477 0 0 0 chr17 49594321 49594374 -45678277 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 963 255 276 26 13 chr17 49595204 49595281 -45677370 - MER63D DNA AcHobo -983 78 1 1 963 21 71 0 0 chr17 49595361 49595403 -45677248 + AT_rich Low_complexity Low_complexity 1 42 0 1 963 275 303 70 52 chr17 49598911 49599026 -45673625 + MIRb SINE MIR 78 194 -74 1 963 362 292 0 20 chr17 49599128 49599226 -45673425 + MER5A DNA MER1_type 15 110 -79 1 963 220 279 0 12 chr17 49599295 49599372 -45673279 + MIRc SINE MIR 100 176 -100 1 963 953 251 70 46 chr17 49599405 49599689 -45672962 + B4 SINE B4 2 292 0 1 963 781 249 27 22 chr17 49600561 49600746 -45671905 + RMER30 DNA MER1_type 16 201 -1 1 963 868 291 82 8 chr17 49600748 49601004 -45671647 + MLT1A0 LTR MaLR 91 365 0 1 963 453 36 0 0 chr17 49601771 49601826 -45670825 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 963 203 182 0 22 chr17 49601884 49601929 -45670722 + T-rich Low_complexity Low_complexity 4 47 0 1 963 232 262 0 59 chr17 49602072 49602157 -45670494 + MLT1A1 LTR MaLR 60 139 -235 1 963 304 250 11 35 chr17 49602218 49602305 -45670346 + MLT1A1 LTR MaLR 305 389 -19 1 963 767 126 8 0 chr17 49602482 49602609 -45670042 + (TC)n Simple_repeat Simple_repeat 1 128 0 1 963 378 0 0 0 chr17 49602616 49602658 -45669993 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 963 1122 162 5 36 chr17 49602659 49602851 -45669800 - B3 SINE B2 -30 186 1 1 963 363 308 101 16 chr17 49602922 49603110 -45669541 + LTR16C LTR ERVL 216 419 -70 1 963 561 265 53 111 chr17 49603451 49603676 -45668975 + B3A SINE B2 2 213 -3 1 963 245 296 42 14 chr17 49604328 49604400 -45668251 - RSINE1 SINE B4 0 165 92 1 963 615 292 100 45 chr17 49604523 49604792 -45667859 + B4A SINE B4 1 284 -8 1 963 303 241 95 12 chr17 49604832 49604916 -45667735 + HAL1-3A_ME LINE L1 1975 2065 -793 1 963 270 81 0 0 chr17 49605122 49605159 -45667492 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 963 881 231 67 52 chr17 49605167 49605436 -45667215 - B4A SINE B4 -18 274 2 1 963 666 211 7 29 chr17 49606217 49606354 -45666297 + B1_Mur4 SINE Alu 1 134 -16 1 963 378 0 0 0 chr17 49608287 49608329 -45664322 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 963 235 298 16 102 chr17 49608406 49608533 -45664118 + MT2B LTR ERVL 150 265 -336 1 963 572 235 45 12 chr17 49608425 49608563 -45664088 + ID_B1 SINE B4 85 227 -65 1 963 282 223 98 78 chr17 49609162 49609264 -45663387 + ID_B1 SINE B4 98 201 -23 1 963 322 219 135 14 chr17 49609194 49609268 -45663383 + B1F SINE Alu 45 127 -22 1 963 254 288 0 0 chr17 49609266 49609325 -45663326 + B1_Mur1 SINE Alu 68 126 -23 1 963 226 200 36 18 chr17 49609326 49609382 -45663269 + B1F SINE Alu 71 127 -22 1 963 767 229 46 0 chr17 49609384 49609559 -45663092 - B3 SINE B2 -21 195 13 1 963 609 313 86 55 chr17 49609568 49609893 -45662758 + MLT1A LTR MaLR 20 354 -20 1 963 630 333 47 12 chr17 49609924 49610275 -45662376 - L1ME2 LINE L1 -359 5881 5529 1 963 1004 230 29 0 chr17 49610610 49610814 -45661837 - B3 SINE B2 0 216 7 1 963 276 205 374 0 chr17 49610832 49610915 -45661736 - PB1D7 SINE Alu -6 114 1 2 963 372 196 160 21 chr17 49610915 49610960 -45661691 - ID SINE ID -140 84 27 2 963 237 65 0 0 chr17 49611932 49611963 -45660688 + (CCCCCA)n Simple_repeat Simple_repeat 6 36 0 2 963 259 189 22 178 chr17 49612460 49612550 -45660101 - ID4_ SINE ID -7 76 1 2 963 252 283 40 10 chr17 49613332 49613432 -45659219 - MER91C DNA Tip100 -37 103 1 2 963 1008 111 0 0 chr17 49615495 49615675 -45656976 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 963 222 37 0 0 chr17 49616521 49616548 -45656103 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 963 405 0 0 0 chr17 49617027 49617072 -45655579 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 963 475 289 12 98 chr17 49617652 49617825 -45654826 - RSINE1 SINE B4 0 165 8 2 963 784 256 51 5 chr17 49617933 49618129 -45654522 - B4 SINE B4 0 292 88 2 963 376 67 16 16 chr17 49618145 49618206 -45654445 + (TCC)n Simple_repeat Simple_repeat 3 63 0 2 963 392 233 20 23 chr17 49618249 49618350 -45654301 - B4A SINE B4 -192 100 2 2 963 24 0 0 0 chr17 49618360 49618384 -45654267 + AT_rich Low_complexity Low_complexity 1 24 0 2 963 736 224 7 20 chr17 49618393 49618543 -45654108 - RSINE1 SINE B4 -15 150 3 2 963 225 0 0 0 chr17 49618560 49618585 -45654066 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 963 256 360 75 68 chr17 49619438 49619599 -45653052 + MER91A DNA Tip100 23 184 -12 2 963 270 271 7 14 chr17 49620428 49620570 -45652081 + (CA)n Simple_repeat Simple_repeat 1 141 0 2 963 732 208 45 19 chr17 49620802 49620959 -45651692 - RSINE1 SINE B4 -2 163 3 2 963 246 312 0 0 chr17 49621622 49621686 -45650965 + (CATA)n Simple_repeat Simple_repeat 1 64 0 2 963 255 174 0 0 chr17 49622041 49622087 -45650564 + MTEb LTR MaLR 330 375 -4 2 963 519 17 0 0 chr17 49623228 49623288 -45649363 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 963 589 246 73 15 chr17 49623289 49623425 -45649226 - B3A SINE B2 -54 144 1 2 963 684 230 211 32 chr17 49624033 49624252 -45648399 + B4A SINE B4 1 265 -27 2 963 189 107 0 0 chr17 49624252 49624280 -45648371 + (CG)n Simple_repeat Simple_repeat 2 29 0 2 963 405 0 0 0 chr17 49624280 49624324 -45648327 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 963 684 230 211 32 chr17 49624324 49624350 -45648301 + B4A SINE B4 266 289 -3 2 963 574 267 18 101 chr17 49625002 49625219 -45647432 - MER20 DNA MER1_type -5 214 16 2 963 522 342 7 0 chr17 49626194 49626340 -45646311 + B1F SINE Alu 3 149 0 2 963 245 388 0 12 chr17 49626347 49626433 -45646218 - MER20 DNA MER1_type -134 85 1 2 963 334 184 132 0 chr17 49626522 49626598 -45646053 - HAL1-3A_ME LINE L1 -798 2060 1975 2 963 427 152 11 21 chr17 49626604 49626698 -45645953 + (TATG)n Simple_repeat Simple_repeat 4 96 0 2 963 882 246 63 52 chr17 49626726 49627013 -45645638 - B4A SINE B4 0 292 3 2 963 252 338 56 106 chr17 49627137 49627316 -45645335 - MER20 DNA MER1_type -49 170 1 2 963 272 342 8 48 chr17 49628969 49629095 -45643556 - L2c LINE L2 -4 3383 3263 2 963 561 96 0 0 chr17 49629854 49629948 -45642703 + (TC)n Simple_repeat Simple_repeat 1 94 0 2 963 877 214 22 11 chr17 49629948 49630128 -45642523 - B3A SINE B2 -16 182 1 2 963 948 323 36 114 chr17 49630145 49630777 -45641874 + RLTR18 LTR ERVK 9 591 -25 2 963 420 20 0 0 chr17 49630817 49630866 -45641785 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 963 490 328 99 46 chr17 49630940 49631263 -45641388 + ORR1E LTR MaLR 20 359 0 2 963 1231 275 33 65 chr17 49631551 49632010 -45640641 + Charlie4a DNA MER1_type 1 444 -64 2 963 519 315 34 45 chr17 49632355 49632624 -45640027 - MER63D DNA AcHobo -795 266 1 2 963 188 362 42 11 chr17 49633415 49633510 -45639141 + MIRc SINE MIR 116 213 -55 2 963 281 209 848 0 chr17 49633796 49633901 -45638750 - RMER30 DNA MER1_type -2 200 7 2 963 734 303 111 38 chr17 49634229 49634490 -45638161 - B4 SINE B4 -2 290 11 2 963 341 292 114 91 chr17 49634545 49634677 -45637974 + ORR1E LTR MaLR 8 142 -217 2 963 306 0 0 0 chr17 49634854 49634888 -45637763 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 963 970 286 7 43 chr17 49634938 49635238 -45637413 - B4 SINE B4 -2 290 2 2 963 375 23 0 0 chr17 49635357 49635401 -45637250 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 963 561 30 0 0 chr17 49636190 49636257 -45636394 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 963 322 333 72 7 chr17 49636368 49636507 -45636144 - B4 SINE B4 -143 149 2 2 963 365 222 24 24 chr17 49636510 49636593 -45636058 - B1F SINE Alu 0 149 67 2 963 284 258 61 20 chr17 49636515 49636614 -45636037 - ID_B1 SINE B4 -3 221 119 2 963 311 233 0 0 chr17 49636751 49636811 -45635840 - ID4 SINE ID -23 60 1 2 963 255 258 14 83 chr17 49636753 49636825 -45635826 - ZP3AR Satellite Satellite -118 94 28 2 963 285 29 0 0 chr17 49636994 49637028 -45635623 + (GA)n Simple_repeat Simple_repeat 2 35 0 2 963 676 290 12 17 chr17 49637028 49637200 -45635451 - B3A SINE B2 -24 174 4 2 963 674 230 36 16 chr17 49637242 49637436 -45635215 - MER33 DNA MER1_type 0 324 127 2 963 646 187 9 0 chr17 49637464 49637571 -45635080 - ID_B1 SINE B4 -2 222 115 2 963 453 66 0 0 chr17 49639394 49639455 -45633196 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 963 391 252 191 0 chr17 49639463 49639578 -45633073 - RSINE1 SINE B4 -17 148 12 2 963 1005 268 128 41 chr17 49640585 49640928 -45631723 - MTEa LTR MaLR -4 375 3 2 963 251 319 136 35 chr17 49641455 49641653 -45630998 + MIRb SINE MIR 26 243 -25 2 963 322 333 18 0 chr17 49641899 49642010 -45630641 + L1MA6 LINE L1 6182 6294 -6 2 963 603 310 62 54 chr17 49642019 49642295 -45630356 + B4 SINE B4 1 278 -14 2 963 513 71 0 0 chr17 49642309 49642379 -45630272 + (CA)n Simple_repeat Simple_repeat 1 70 0 2 963 322 296 28 0 chr17 49642434 49642505 -45630146 + ID4_ SINE ID 5 77 -6 2 963 323 44 22 0 chr17 49642510 49642555 -45630096 + (CAAT)n Simple_repeat Simple_repeat 2 47 0 2 963 755 290 126 23 chr17 49643408 49643669 -45628982 + B4A SINE B4 1 288 -4 2 963 932 281 114 102 chr17 49643993 49644552 -45628099 + Lx8 LINE L1 6050 6615 -858 2 963 226 365 0 55 chr17 49644575 49644685 -45627966 - MIRc SINE MIR -142 126 23 2 963 456 239 47 12 chr17 49645559 49645728 -45626923 + (TATG)n Simple_repeat Simple_repeat 4 178 0 2 963 296 260 11 68 chr17 49645747 49645937 -45626714 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 2 963 328 242 29 52 chr17 49646716 49646890 -45625761 + (TATATG)n Simple_repeat Simple_repeat 5 174 0 2 963 330 111 0 0 chr17 49647447 49647492 -45625159 - HAL1-3A_ME LINE L1 -838 2020 1976 2 963 581 174 40 10 chr17 49647495 49647795 -45624856 + (TG)n Simple_repeat Simple_repeat 1 309 0 2 963 207 114 0 0 chr17 49648049 49648084 -45624567 + (TCTCCC)n Simple_repeat Simple_repeat 2 36 0 2 963 186 43 0 0 chr17 49648162 49648185 -45624466 + (CACCC)n Simple_repeat Simple_repeat 4 26 0 2 963 449 236 83 38 chr17 49648226 49648358 -45624293 - ID_B1 SINE B4 -3 221 84 2 963 309 263 26 0 chr17 49648443 49648519 -45624132 - ID4_ SINE ID -1 82 5 2 963 402 329 22 0 chr17 49648538 49648675 -45623976 - B1F1 SINE Alu -8 141 2 2 963 224 296 162 10 chr17 49648684 49648783 -45623868 - MIRb SINE MIR -121 147 34 2 963 421 278 31 0 chr17 49649072 49649169 -45623482 + MER45A DNA Tip100 78 177 -1 2 963 186 43 0 0 chr17 49650201 49650224 -45622427 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2 963 1069 182 58 15 chr17 49650242 49650448 -45622203 - B3 SINE B2 0 216 2 2 963 480 246 29 73 chr17 49650454 49650590 -45622061 - B1F SINE Alu 0 149 20 2 963 776 271 24 9 chr17 49651375 49651587 -45621064 - ID_B1 SINE B4 -5 219 5 2 963 530 175 9 0 chr17 49651764 49651878 -45620773 + (CA)n Simple_repeat Simple_repeat 2 116 0 2 963 204 231 0 0 chr17 49651878 49651917 -45620734 + (CATA)n Simple_repeat Simple_repeat 4 42 0 2 963 326 329 91 21 chr17 49653518 49653661 -45618990 - LTR79 LTR ERVL -25 502 350 2 963 1146 276 7 24 chr17 49654576 49654869 -45617782 + B4 SINE B4 4 291 -1 2 963 237 65 0 0 chr17 49655884 49655915 -45616736 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 963 607 250 35 75 chr17 49655917 49656090 -45616561 - B4 SINE B4 -69 223 58 2 963 932 105 7 0 chr17 49656702 49656845 -45615806 + (GA)n Simple_repeat Simple_repeat 1 144 0 2 963 468 0 0 0 chr17 49657193 49657245 -45615406 + (TC)n Simple_repeat Simple_repeat 1 52 0 2 963 342 0 0 0 chr17 49657245 49657282 -45615369 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 963 224 326 35 0 chr17 49657631 49657744 -45614907 + MIR SINE MIR 8 125 -83 2 963 491 320 103 66 chr17 49657774 49658075 -45614576 + ORR1E LTR MaLR 43 354 -5 2 963 219 306 107 8 chr17 49658085 49658207 -45614444 + MIR SINE MIR 122 255 -7 2 963 224 273 36 0 chr17 49658207 49658262 -45614389 + (CATG)n Simple_repeat Simple_repeat 1 57 0 2 963 851 291 73 61 chr17 49658282 49658626 -45614025 - MTEa LTR MaLR -31 348 1 2 963 1883 215 140 52 chr17 49660862 49661140 -45611511 + RMER20B LTR ERVK 11 334 -293 2 963 483 18 0 0 chr17 49661140 49661196 -45611455 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 963 1883 215 140 52 chr17 49661196 49661461 -45611190 + RMER20B LTR ERVK 335 601 -26 2 963 192 315 40 14 chr17 49661485 49661559 -45611092 - L2b LINE L2 -2 3373 3298 2 963 754 77 19 0 chr17 49661684 49661788 -45610863 + B2_Mm1t SINE B2 81 186 -7 2 963 1146 198 160 73 chr17 49661948 49662292 -45610359 + ORR1D1 LTR MaLR 1 374 0 3 963 641 182 25 0 chr17 49662805 49662926 -45609725 + B1F SINE Alu 1 124 -25 3 963 289 226 130 72 chr17 49662979 49663117 -45609534 + B1F2 SINE Alu 4 149 0 3 963 554 246 29 14 chr17 49664626 49664766 -45607885 + ID_B1 SINE B4 81 222 -2 3 963 255 169 0 40 chr17 49664781 49664855 -45607796 + G-rich Low_complexity Low_complexity 4 74 0 3 963 224 329 30 30 chr17 49666243 49666412 -45606239 + (TGGA)n Simple_repeat Simple_repeat 4 172 0 3 963 248 341 34 23 chr17 49666367 49666544 -45606107 + (TGGG)n Simple_repeat Simple_repeat 1 179 0 3 963 302 321 30 0 chr17 49666475 49666609 -45606042 + (TGGA)n Simple_repeat Simple_repeat 2 139 0 3 963 495 293 147 0 chr17 49666871 49667028 -45605623 + B4A SINE B4 107 286 -6 3 963 342 0 0 0 chr17 49667040 49667078 -45605573 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 963 299 209 32 37 chr17 49668526 49668746 -45603905 + GA-rich Low_complexity Low_complexity 1 218 0 3 963 441 0 0 0 chr17 49668794 49668843 -45603808 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 963 658 262 44 55 chr17 49669629 49669811 -45602840 - B3A SINE B2 -18 180 1 3 963 183 80 0 0 chr17 49669967 49669992 -45602659 + (CACCC)n Simple_repeat Simple_repeat 1 25 0 3 963 925 294 158 9 chr17 49670192 49670508 -45602143 + MLT1A0 LTR MaLR 3 365 0 3 963 194 105 0 26 chr17 49670633 49670672 -45601979 + (TAA)n Simple_repeat Simple_repeat 1 38 0 3 963 204 358 33 16 chr17 49671168 49671290 -45601361 - MIR3 SINE MIR -18 190 67 3 963 900 263 54 19 chr17 49671465 49671725 -45600926 + B4A SINE B4 5 273 -19 3 963 601 234 51 57 chr17 49672155 49672332 -45600319 + MLT2D LTR ERVL 1 176 -238 3 963 2318 75 62 0 chr17 49672378 49672686 -45599965 + ORR1A2 LTR MaLR 1 327 0 3 963 406 303 38 44 chr17 49673143 49673302 -45599349 + MLT1I LTR MaLR 252 409 -2 3 963 832 243 6 0 chr17 49673365 49673546 -45599105 - B3A SINE B2 -16 182 1 3 963 264 59 0 0 chr17 49673805 49673839 -45598812 + (A)n Simple_repeat Simple_repeat 1 34 0 3 963 418 303 48 84 chr17 49674244 49674410 -45598241 + MER20 DNA MER1_type 30 189 -30 3 963 429 70 0 0 chr17 49674443 49674500 -45598151 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 963 507 286 21 14 chr17 49674505 49674647 -45598004 - B4 SINE B4 -147 145 3 3 963 405 0 0 0 chr17 49674717 49674762 -45597889 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 963 378 331 82 47 chr17 49675050 49675192 -45597459 + LTR85a LTR Gypsy? 279 429 -273 3 963 510 46 0 0 chr17 49675192 49675257 -45597394 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 963 378 331 82 47 chr17 49675257 49675285 -45597366 + LTR85a LTR Gypsy? 430 455 -247 3 963 182 184 0 50 chr17 49675316 49675356 -45597295 - L2c LINE L2 -12 3375 3338 3 963 424 170 179 0 chr17 49676104 49676210 -45596441 - RCHARR1 DNA MER1_type -26 948 824 3 120 452 294 22 111 chr17 49676213 49676393 -45596258 + RSINE1 SINE B4 2 165 0 3 964 285 299 79 48 chr17 49676365 49676530 -45596121 - RCHARR1 DNA MER1_type -58 916 747 3 964 595 187 114 0 chr17 49676521 49676644 -45596007 + MTD LTR MaLR 8 144 -275 3 964 2729 238 104 111 chr17 49676792 49677741 -45594910 - Lx5 LINE L1 -23 7027 6085 3 964 296 118 0 56 chr17 49677744 49677798 -45594853 - Lx2A1 LINE L1 -1265 5743 5693 3 964 377 220 55 148 chr17 49677831 49677959 -45594692 - RSINE1 SINE B4 -46 119 4 3 964 500 0 0 16 chr17 49678366 49678427 -45594224 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 964 290 301 107 49 chr17 49679023 49679246 -45593405 + MIRb SINE MIR 15 257 -19 3 964 502 249 156 19 chr17 49679792 49679952 -45592699 + ID_B1 SINE B4 1 182 -42 3 964 200 298 0 0 chr17 49680391 49680448 -45592203 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 964 306 155 35 0 chr17 49680448 49680506 -45592145 + HAL1-3A_ME LINE L1 1968 2027 -831 3 964 543 191 0 0 chr17 49680558 49680720 -45591931 + (CA)n Simple_repeat Simple_repeat 2 163 0 3 964 582 252 139 8 chr17 49680836 49681080 -45591571 + B4 SINE B4 3 278 -14 3 964 259 248 162 18 chr17 49681224 49681335 -45591316 - RMER30 DNA MER1_type -3 199 73 3 964 315 271 64 27 chr17 49681397 49681507 -45591144 - LTR16A1 LTR ERVL -3 453 340 3 964 483 18 0 0 chr17 49682209 49682265 -45590386 + (GA)n Simple_repeat Simple_repeat 1 56 0 3 964 692 190 83 0 chr17 49682290 49682411 -45590240 + B1_Mur1 SINE Alu 5 135 -14 3 964 537 259 8 33 chr17 49682419 49682539 -45590112 + B3A SINE B2 27 143 -55 3 964 378 0 0 0 chr17 49682543 49682585 -45590066 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 964 352 226 107 53 chr17 49683196 49683405 -45589246 - MIRb SINE MIR -30 238 16 3 964 486 245 7 86 chr17 49683669 49683821 -45588830 - ID_B1 SINE B4 -1 223 84 3 964 800 291 53 28 chr17 49684230 49684513 -45588138 + B4 SINE B4 3 292 0 3 964 387 60 0 0 chr17 49684522 49684572 -45588079 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 964 189 94 0 0 chr17 49685162 49685194 -45587457 + (T)n Simple_repeat Simple_repeat 1 32 0 3 964 783 293 24 57 chr17 49685713 49686010 -45586641 + B4A SINE B4 2 288 -4 3 964 354 127 0 0 chr17 49686025 49686096 -45586555 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 964 300 318 140 102 chr17 49686239 49686582 -45586069 + ORR1E LTR MaLR 4 359 0 3 964 414 292 109 48 chr17 49686760 49687045 -45585606 - L1M5 LINE L1 -434 5806 5506 3 964 23 0 0 0 chr17 49687109 49687132 -45585519 + AT_rich Low_complexity Low_complexity 1 23 0 3 964 650 258 77 22 chr17 49687135 49687317 -45585334 - B3 SINE B2 0 216 25 3 964 552 30 0 0 chr17 49687449 49687515 -45585136 + (TC)n Simple_repeat Simple_repeat 2 67 0 3 964 414 0 0 0 chr17 49688299 49688345 -45584306 + (TAA)n Simple_repeat Simple_repeat 1 46 0 3 964 1377 28 6 11 chr17 49688387 49688567 -45584084 + (TTC)n Simple_repeat Simple_repeat 2 180 0 3 964 531 112 0 0 chr17 49688574 49688654 -45583997 + (TCC)n Simple_repeat Simple_repeat 2 81 0 3 964 430 264 97 97 chr17 49688677 49688832 -45583819 + RSINE1 SINE B4 9 163 -2 3 964 407 266 157 86 chr17 49688943 49689198 -45583453 - B4 SINE B4 -18 274 2 3 964 270 95 0 0 chr17 49689921 49689963 -45582688 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 964 666 250 26 7 chr17 49690379 49690458 -45582193 + ID SINE ID 2 83 -141 3 964 215 299 82 27 chr17 49690458 49690568 -45582083 + B1F1 SINE Alu 1 116 -33 3 964 534 297 14 14 chr17 49690937 49691077 -45581574 + RSINE1 SINE B4 2 141 -24 3 964 330 115 0 0 chr17 49691077 49691129 -45581522 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 964 637 129 22 16 chr17 49691134 49691316 -45581335 + GA-rich Low_complexity Low_complexity 1 183 0 3 964 222 370 67 8 chr17 49691323 49691443 -45581208 + MIRb SINE MIR 103 229 -39 3 964 707 254 25 20 chr17 49691558 49691755 -45580896 + B3A SINE B2 1 198 0 3 964 342 331 146 44 chr17 49691813 49692271 -45580380 + L1ME3A LINE L1 5614 6118 -55 3 964 423 0 0 0 chr17 49692330 49692377 -45580274 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 964 3068 146 208 2 chr17 49692555 49693117 -45579534 + RLTR33 LTR ERVK 1 678 0 3 964 786 248 72 30 chr17 49693140 49693402 -45579249 - B4A SINE B4 -18 274 2 3 964 218 282 56 14 chr17 49693698 49693770 -45578881 - MIR SINE MIR -117 145 71 3 964 821 204 150 10 chr17 49694018 49694211 -45578440 + ID_B1 SINE B4 4 223 -1 3 964 290 301 21 21 chr17 49695119 49695214 -45577437 - MIRb SINE MIR -38 230 136 3 964 513 0 0 0 chr17 49695266 49695323 -45577328 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 964 928 237 100 16 chr17 49695324 49695573 -45577078 - B4A SINE B4 -22 270 1 3 964 1056 190 23 23 chr17 49695805 49696020 -45576631 + B3 SINE B2 2 216 0 3 964 228 318 0 0 chr17 49697340 49697406 -45575245 + (TATATG)n Simple_repeat Simple_repeat 5 70 0 3 964 571 257 7 7 chr17 49697412 49697549 -45575102 - B4 SINE B4 -8 284 148 3 964 1093 94 12 12 chr17 49698035 49698208 -45574443 + (TTTC)n Simple_repeat Simple_repeat 3 175 0 3 964 249 250 0 0 chr17 49698269 49698325 -45574326 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 964 653 268 0 148 chr17 49698333 49698543 -45574108 - B4 SINE B4 -6 286 108 3 964 180 176 0 0 chr17 49698907 49698941 -45573710 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 3 964 450 0 0 0 chr17 49699574 49699624 -45573027 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 964 273 244 16 31 chr17 49699664 49699791 -45572860 + (CA)n Simple_repeat Simple_repeat 2 126 0 3 964 306 191 39 8 chr17 49699815 49699942 -45572709 + (CA)n Simple_repeat Simple_repeat 2 132 0 3 964 419 135 58 17 chr17 49700018 49700191 -45572460 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 964 522 0 0 0 chr17 49702034 49702092 -45570559 + (TC)n Simple_repeat Simple_repeat 1 58 0 3 964 251 203 0 14 chr17 49702808 49702878 -45569773 + CT-rich Low_complexity Low_complexity 2 70 0 3 964 25 31 0 0 chr17 49703647 49703679 -45568972 + GC_rich Low_complexity Low_complexity 1 32 0 3 964 31 0 0 0 chr17 49704156 49704187 -45568464 + AT_rich Low_complexity Low_complexity 1 31 0 3 964 521 271 7 41 chr17 49704839 49704985 -45567666 + RSINE1 SINE B4 4 144 -21 3 964 258 32 0 0 chr17 49705002 49705033 -45567618 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 964 237 33 0 0 chr17 49705252 49705282 -45567369 + (T)n Simple_repeat Simple_repeat 1 30 0 3 964 514 325 72 118 chr17 49705717 49706080 -45566571 + MLT2D LTR ERVL 3 348 -66 3 964 380 283 31 25 chr17 49706102 49706265 -45566386 + CT-rich Low_complexity Low_complexity 4 167 0 4 964 318 262 74 12 chr17 49706419 49706500 -45566151 + PB1D10 SINE Alu 1 86 -31 4 964 229 347 0 0 chr17 49706520 49706592 -45566059 + GA-rich Low_complexity Low_complexity 1 72 0 4 964 716 301 28 37 chr17 49706766 49706983 -45565668 + ID_B1 SINE B4 7 221 -3 4 964 557 244 17 9 chr17 49706983 49707099 -45565552 + RSINE1 SINE B4 8 124 -41 4 964 387 0 0 0 chr17 49707100 49707143 -45565508 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 964 598 285 46 13 chr17 49707597 49707750 -45564901 - RSINE1 SINE B4 -6 159 2 4 964 891 231 46 92 chr17 49708674 49708979 -45563672 + B4A SINE B4 2 292 0 4 964 333 0 0 0 chr17 49709108 49709145 -45563506 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 964 293 224 0 0 chr17 49709279 49709337 -45563314 + B3A SINE B2 5 62 -136 4 964 214 339 31 0 chr17 49709738 49709803 -45562848 - L2c LINE L2 -44 3343 3277 4 964 476 223 78 0 chr17 49709864 49709967 -45562684 + ID_B1 SINE B4 89 199 -25 4 964 372 22 0 0 chr17 49709976 49710021 -45562630 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 964 747 227 67 57 chr17 49710027 49710237 -45562414 + B3 SINE B2 5 216 0 4 964 1903 135 30 60 chr17 49710308 49710639 -45562012 + ORR1A4 LTR MaLR 1 321 -8 4 964 5952 169 14 47 chr17 49710643 49712255 -45560396 + ORR1A4-int LTR MaLR 1 1792 0 4 964 1910 167 6 0 chr17 49712257 49712575 -45560076 + ORR1A4 LTR MaLR 3 322 -7 4 964 429 20 0 0 chr17 49712576 49712626 -45560025 + (ATG)n Simple_repeat Simple_repeat 2 51 0 4 964 242 349 50 50 chr17 49712731 49712870 -45559781 - MER103 DNA DNA -5 161 23 4 964 759 250 121 20 chr17 49713561 49713810 -45558841 + B4A SINE B4 1 274 -18 4 964 351 0 0 0 chr17 49713834 49713873 -45558778 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 964 664 295 71 49 chr17 49713882 49714474 -45558177 + L1M4 LINE L1 1400 2057 -5277 4 964 585 241 29 0 chr17 49714474 49714611 -45558040 + B1_Mur2 SINE Alu 2 142 -7 4 964 616 320 125 28 chr17 49714611 49714768 -45557883 + L1M4 LINE L1 2058 2221 -5113 4 964 757 297 101 11 chr17 49714954 49715418 -45557233 + L1M4 LINE L1 2970 3475 -3531 4 964 414 0 0 0 chr17 49715442 49715488 -45557163 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 964 253 323 118 0 chr17 49715506 49715599 -45557052 - PB1 SINE Alu -23 104 1 4 964 900 304 77 11 chr17 49715875 49716148 -45556503 + MTEa LTR MaLR 27 317 -62 4 964 1189 321 32 28 chr17 49716247 49716679 -45555972 - MLT2B2 LTR ERVL -11 504 71 4 964 387 331 34 14 chr17 49716675 49716822 -45555829 - MER45A DNA Tip100 -28 150 1 4 964 410 299 131 25 chr17 49716841 49717040 -45555611 - ERVL-E-int LTR ERVL -2223 3444 3225 4 964 451 238 105 13 chr17 49717057 49717210 -45555441 - RMER5 LTR ERV1 -9 525 359 4 964 1635 236 36 0 chr17 49717253 49717584 -45555067 - ORR1D2 LTR MaLR 0 370 28 4 964 1477 209 88 9 chr17 49717593 49717921 -45554730 + MTD LTR MaLR 63 416 -3 4 964 594 305 103 38 chr17 49717944 49718234 -45554417 - RMER5 LTR ERV1 -212 322 14 4 964 336 304 26 0 chr17 49718247 49718362 -45554289 - ERVL-E-int LTR ERVL -2449 3218 3101 4 964 916 281 39 39 chr17 49719173 49719458 -45553193 + B4 SINE B4 4 288 -4 4 964 563 27 14 0 chr17 49719463 49719536 -45553115 + (CA)n Simple_repeat Simple_repeat 1 74 0 4 964 318 246 14 0 chr17 49720245 49720314 -45552337 - ID4_ SINE ID -2 81 12 4 964 254 290 88 68 chr17 49720505 49720653 -45551998 - L2a LINE L2 -1 3425 3275 4 964 218 279 0 0 chr17 49720653 49720696 -45551955 + B4A SINE B4 1 43 -249 4 964 977 284 40 94 chr17 49720698 49721071 -45551580 + MTE2a LTR MaLR 6 358 -21 4 964 971 220 73 41 chr17 49721076 49721294 -45551357 + B4A SINE B4 68 292 0 4 964 2428 186 30 88 chr17 49722455 49723057 -45549594 - Lx9 LINE L1 0 7644 7078 4 964 328 339 73 68 chr17 49724916 49725122 -45547529 - Charlie19a DNA Charlie -158 228 22 4 964 767 290 55 31 chr17 49725444 49725700 -45546951 - B4A SINE B4 -30 262 1 4 964 357 24 0 0 chr17 49725884 49725926 -45546725 + (CATA)n Simple_repeat Simple_repeat 2 43 0 4 964 189 121 0 0 chr17 49726331 49726364 -45546287 + (TC)n Simple_repeat Simple_repeat 1 33 0 4 964 639 292 61 77 chr17 49726397 49726694 -45545957 - B4 SINE B4 0 292 1 4 964 241 320 90 38 chr17 49726694 49726827 -45545824 + MIR SINE MIR 92 231 -31 4 964 220 53 0 50 chr17 49727882 49727922 -45544729 + (TGGGGG)n Simple_repeat Simple_repeat 3 40 0 4 964 207 154 39 0 chr17 49727979 49728031 -45544620 + (TTG)n Simple_repeat Simple_repeat 2 55 0 4 964 452 182 97 7 chr17 49728076 49728191 -45544460 - B1F SINE Alu -22 127 6 4 964 279 308 65 0 chr17 49728375 49728387 -45544264 + B1F2 SINE Alu 36 149 0 4 964 416 253 0 0 chr17 49728387 49728482 -45544169 + ID_B1 SINE B4 130 224 0 4 964 231 369 160 38 chr17 49729034 49729347 -45543304 + ORR1E LTR MaLR 1 351 -8 4 964 1786 289 78 54 chr17 49730001 49730817 -45541834 - Lx8 LINE L1 -1 7472 6637 4 964 365 270 14 35 chr17 49730878 49731078 -45541573 + B4 SINE B4 1 292 0 4 964 351 60 0 0 chr17 49731104 49731154 -45541497 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 964 327 264 32 102 chr17 49731631 49731817 -45540834 + L1MA4A LINE L1 6125 6297 -6 4 964 288 253 93 103 chr17 49731832 49731875 -45540776 - B2_Mm2 SINE B2 -1 194 161 4 964 684 71 0 0 chr17 49731875 49731974 -45540677 + (TG)n Simple_repeat Simple_repeat 1 99 0 4 964 288 253 93 103 chr17 49731974 49731992 -45540659 - B2_Mm2 SINE B2 -35 160 4 4 964 644 252 0 8 chr17 49731992 49732124 -45540527 - RSINE1 SINE B4 -31 134 4 4 964 405 0 0 0 chr17 49732143 49732188 -45540463 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 964 448 324 27 0 chr17 49732788 49732936 -45539715 + Tigger14a DNA MER2_type 1 152 -172 4 964 650 251 56 62 chr17 49733279 49733474 -45539177 + B4A SINE B4 2 195 -97 4 964 286 181 59 24 chr17 49733476 49733561 -45539090 + Lx4B LINE L1 6964 7051 -7 4 964 243 0 0 0 chr17 49733565 49733592 -45539059 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 964 259 284 0 15 chr17 49733604 49733672 -45538979 + B4A SINE B4 206 272 -20 4 964 258 32 0 0 chr17 49733676 49733707 -45538944 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 964 1001 67 23 19 chr17 49734853 49735068 -45537583 + (TAGA)n Simple_repeat Simple_repeat 1 215 0 4 964 25 31 0 0 chr17 49735914 49735946 -45536705 + AT_rich Low_complexity Low_complexity 1 32 0 4 964 320 0 0 24 chr17 49736199 49736240 -45536411 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 4 964 913 215 9 53 chr17 49736246 49736472 -45536179 - B3 SINE B2 0 216 1 4 964 1516 233 42 50 chr17 49736729 49737086 -45535565 + ORR1E LTR MaLR 1 354 -5 4 964 248 304 25 0 chr17 49737195 49737285 -45535366 - MIRc SINE MIR -122 146 48 4 964 414 0 0 0 chr17 49737315 49737361 -45535290 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 964 531 260 76 8 chr17 49737839 49737971 -45534680 + RSINE1 SINE B4 1 141 -24 4 964 351 0 0 0 chr17 49737972 49738011 -45534640 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 964 495 0 0 0 chr17 49738011 49738065 -45534586 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 964 285 351 40 35 chr17 49738322 49738496 -45534155 - L2 LINE L2 -904 2515 2341 4 964 793 242 69 23 chr17 49738672 49738888 -45533763 + B4A SINE B4 5 230 -62 4 964 333 0 0 0 chr17 49738934 49738971 -45533680 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 964 482 262 24 8 chr17 49738999 49739126 -45533525 + ORR1E LTR MaLR 19 147 -212 4 964 3293 205 25 28 chr17 49739177 49739846 -45532805 - RMER13A LTR ERVK -48 812 146 4 964 662 209 70 65 chr17 49739852 49740067 -45532584 - RMER13B LTR ERVK -686 222 7 4 964 755 271 17 23 chr17 49740494 49740668 -45531983 + B3A SINE B2 1 173 -25 4 964 198 0 0 0 chr17 49740681 49740703 -45531948 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 964 207 344 0 44 chr17 49741274 49741411 -45531240 + (TATATG)n Simple_repeat Simple_repeat 6 136 0 4 964 480 320 138 15 chr17 49741415 49741675 -45530976 - B4A SINE B4 0 292 1 4 964 1070 130 6 0 chr17 49742186 49742363 -45530288 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 4 964 772 275 38 24 chr17 49742995 49743207 -45529444 - B3A SINE B2 0 216 2 4 964 366 340 74 47 chr17 49743596 49743738 -45528913 + RSINE1 SINE B4 2 148 -17 4 964 254 48 45 61 chr17 49743738 49743804 -45528847 + (CAGA)n Simple_repeat Simple_repeat 4 68 0 4 964 935 262 53 38 chr17 49743815 49744047 -45528604 + B4A SINE B4 1 241 -51 4 964 2279 133 80 105 chr17 49744047 49744489 -45528162 - RMER4A LTR ERVK 0 466 48 4 964 189 0 0 0 chr17 49744489 49744510 -45528141 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 964 2279 133 80 105 chr17 49744510 49744545 -45528106 - RMER4A LTR ERVK -419 47 3 4 964 935 262 53 38 chr17 49744545 49744578 -45528073 + B4A SINE B4 242 270 -22 4 964 498 17 0 0 chr17 49744579 49744638 -45528013 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 964 1314 79 6 11 chr17 49744663 49744842 -45527809 - B2_Mm2 SINE B2 -16 179 2 4 964 230 242 108 21 chr17 49744842 49744933 -45527718 + B3 SINE B2 95 193 -23 4 964 247 292 15 0 chr17 49745127 49745192 -45527459 - B3A SINE B2 -19 179 114 4 964 358 281 115 64 chr17 49745590 49745631 -45527020 + B4A SINE B4 1 41 -251 4 964 1552 147 22 131 chr17 49745631 49745998 -45526653 - ORR1A4 LTR MaLR 0 329 3 4 964 358 281 115 64 chr17 49745998 49746112 -45526539 + B4A SINE B4 42 164 -128 4 964 541 208 4 34 chr17 49747571 49747808 -45524843 + GA-rich Low_complexity Low_complexity 1 229 0 4 964 534 227 220 6 chr17 49747951 49748124 -45524527 - B3 SINE B2 -2 214 5 4 964 242 310 98 30 chr17 49748605 49748738 -45523913 + B1F2 SINE Alu 2 143 -6 4 964 525 242 23 0 chr17 49748619 49748747 -45523904 + B4A SINE B4 100 230 -62 4 964 774 220 62 2 chr17 49748748 49748927 -45523724 + B3A SINE B2 2 188 -28 4 964 378 0 0 0 chr17 49748927 49748969 -45523682 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 5 964 752 241 78 29 chr17 49748969 49748994 -45523657 + B3 SINE B2 189 215 -1 4 964 438 20 0 0 chr17 49749104 49749155 -45523496 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 964 759 206 105 24 chr17 49750770 49750979 -45521672 + Lx8 LINE L1 7118 7343 -130 5 964 336 77 0 0 chr17 49750982 49751034 -45521617 + (TATG)n Simple_repeat Simple_repeat 1 52 0 5 964 1411 80 16 16 chr17 49751069 49751260 -45521391 + B2_Mm2 SINE B2 1 191 -4 5 964 189 94 0 0 chr17 49751461 49751493 -45521158 + (CAA)n Simple_repeat Simple_repeat 2 33 0 5 964 825 286 52 42 chr17 49752092 49752380 -45520271 + B4 SINE B4 2 292 0 5 964 890 263 71 90 chr17 49752427 49752749 -45519902 - MTEa LTR MaLR -1 378 63 5 964 306 296 56 0 chr17 49752758 49752883 -45519768 - L1MD1 LINE L1 -1965 6030 5899 5 964 356 262 73 51 chr17 49753076 49753213 -45519438 - L1M5 LINE L1 -554 5625 5486 5 964 327 194 164 10 chr17 49753254 49753358 -45519293 - L1MD1 LINE L1 -308 5934 5815 5 964 481 276 64 6 chr17 49753371 49753528 -45519123 - L1MD1 LINE L1 -490 5752 5587 5 964 302 165 0 85 chr17 49753815 49753921 -45518730 + (TATATG)n Simple_repeat Simple_repeat 5 101 0 5 964 244 253 72 0 chr17 49753936 49754019 -45518632 - L1M5 LINE L1 -700 5473 5385 5 964 304 233 54 32 chr17 49755266 49755359 -45517292 - MIR SINE MIR -101 161 67 5 964 526 223 35 9 chr17 49755383 49755496 -45517155 - PB1D9 SINE Alu -1 119 4 5 964 442 0 35 0 chr17 49755694 49755752 -45516899 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 964 324 0 0 0 chr17 49755929 49755965 -45516686 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 5 964 1122 52 0 0 chr17 49755965 49756099 -45516552 - B1_Mus1 SINE Alu -12 136 3 5 964 1113 201 14 9 chr17 49756240 49756451 -45516200 - B3 SINE B2 -4 212 1 5 964 1230 28 0 0 chr17 49756476 49756618 -45516033 + B1_Mus1 SINE Alu 1 142 -6 5 964 835 115 0 14 chr17 49756620 49756761 -45515890 + (GGAA)n Simple_repeat Simple_repeat 3 141 0 5 964 559 174 0 170 chr17 49757018 49757177 -45515474 + B1F SINE Alu 2 133 -16 5 964 661 230 15 0 chr17 49757202 49757337 -45515314 + B1_Mur2 SINE Alu 5 141 -8 5 964 450 0 0 0 chr17 49757340 49757390 -45515261 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 964 463 232 132 95 chr17 49757779 49757969 -45514682 - B3A SINE B2 0 198 2 5 964 492 195 88 59 chr17 49758261 49758397 -45514254 + B1_Mur1 SINE Alu 1 140 -9 5 964 225 339 23 62 chr17 49758591 49758720 -45513931 - MIRc SINE MIR -32 236 113 5 964 217 283 17 0 chr17 49758897 49758957 -45513694 - MIR SINE MIR -89 119 59 5 964 1071 206 106 78 chr17 49759310 49759631 -45513020 + ORR1D2 LTR MaLR 1 330 -40 5 964 21 57 0 0 chr17 49759707 49759742 -45512909 + AT_rich Low_complexity Low_complexity 1 35 0 5 964 627 277 114 50 chr17 49760207 49760469 -45512182 + B4 SINE B4 2 280 -12 5 964 274 254 167 42 chr17 49760788 49760932 -45511719 + MER33 DNA MER1_type 48 209 -115 5 964 819 257 13 55 chr17 49761113 49761325 -45511326 - B3A SINE B2 -9 186 3 5 964 1232 182 23 5 chr17 49761845 49762066 -45510585 + URR1B DNA MER1_type 1 225 0 5 964 409 243 0 0 chr17 49762403 49762477 -45510174 + B4 SINE B4 4 77 -215 5 964 491 243 103 0 chr17 49762530 49762666 -45509985 - Lx5 LINE L1 -5 7045 6896 5 964 1131 140 6 0 chr17 49762668 49762839 -45509812 + Lx5 LINE L1 6235 6406 -644 5 964 854 284 29 5 chr17 49762850 49763055 -45509596 + B4 SINE B4 83 292 0 5 964 462 18 0 0 chr17 49763106 49763161 -45509490 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 964 755 237 28 11 chr17 49764096 49764275 -45508376 + B3A SINE B2 1 182 -16 5 964 293 255 0 19 chr17 49764464 49764568 -45508083 + (TATG)n Simple_repeat Simple_repeat 1 102 0 5 964 299 344 0 0 chr17 49764571 49764664 -45507987 + (TG)n Simple_repeat Simple_repeat 1 93 0 5 964 889 273 25 64 chr17 49764682 49764964 -45507687 - B4A SINE B4 -17 275 5 5 964 239 250 17 111 chr17 49765213 49765330 -45507321 - CYRA11_Mm Unknown Y-chromosome -295 322 217 5 964 545 140 198 17 chr17 49765228 49765344 -45507307 + URR1B DNA MER1_type 89 225 0 5 964 549 340 10 42 chr17 49765820 49766013 -45506638 - B3A SINE B2 -5 193 7 5 964 366 23 0 0 chr17 49767303 49767346 -45505305 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 5 964 615 149 0 0 chr17 49767346 49767440 -45505211 - B1_Mur1 SINE Alu -10 139 46 5 964 326 262 22 56 chr17 49767474 49767563 -45505088 + B1_Mus1 SINE Alu 9 94 -54 5 964 333 0 0 0 chr17 49767608 49767645 -45505006 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 964 294 286 53 94 chr17 49767653 49767919 -45504732 + L2a LINE L2 3115 3384 -3 5 964 700 271 74 20 chr17 49768283 49768486 -45504165 + B3 SINE B2 3 216 0 5 964 755 236 102 42 chr17 49768560 49768930 -45503721 - BGLII_B LTR ERVK -10 431 1 5 964 252 314 0 0 chr17 49769222 49769290 -45503361 + ID4 SINE ID 2 69 -14 5 964 231 36 0 0 chr17 49769344 49769372 -45503279 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 964 559 296 107 8 chr17 49769449 49769701 -45502950 - B4A SINE B4 -14 278 2 5 964 380 267 68 5 chr17 49769916 49770021 -45502630 + B1F SINE Alu 15 124 -3 5 964 241 314 14 0 chr17 49770109 49770179 -45502472 - MTE2a LTR MaLR -303 76 6 5 964 290 267 22 11 chr17 49770559 49770650 -45502001 + MER53 DNA hAT 101 192 -1 5 964 543 311 14 140 chr17 49770916 49771208 -45501443 + RCHARR1 DNA MER1_type 9 263 -711 5 964 198 0 0 0 chr17 49771244 49771266 -45501385 + (TTTTTG)n Simple_repeat Simple_repeat 6 27 0 5 964 518 185 14 16 chr17 49771266 49771383 -45501268 - B1_Mus1 SINE Alu 0 120 1 5 964 1076 257 117 7 chr17 49771385 49771808 -45500843 + RCHARR1 DNA MER1_type 316 812 -162 5 964 198 0 0 0 chr17 49771808 49771830 -45500821 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 964 1076 251 119 0 chr17 49771830 49771858 -45500793 + RCHARR1 DNA MER1_type 813 850 -124 5 964 269 231 88 25 chr17 49771892 49771950 -45500701 + RSINE1 SINE B4 79 141 -24 5 964 459 0 0 0 chr17 49771950 49772001 -45500650 + (TC)n Simple_repeat Simple_repeat 1 51 0 5 964 269 231 88 25 chr17 49772001 49772022 -45500629 + RSINE1 SINE B4 142 162 -3 5 964 27 29 0 0 chr17 49772051 49772085 -45500566 + AT_rich Low_complexity Low_complexity 1 34 0 5 964 269 158 33 73 chr17 49772102 49772192 -45500459 - Lx7 LINE L1 0 7696 7622 5 964 326 239 28 14 chr17 49772335 49772407 -45500244 + RCHARR1 DNA MER1_type 899 971 -3 5 964 341 264 41 30 chr17 49772661 49772865 -45499786 - L1_Rod LINE L1 -2528 3319 3097 5 964 305 276 26 0 chr17 49773729 49773805 -45498846 + B3A SINE B2 88 165 -33 5 964 3112 106 84 4 chr17 49773828 49774313 -45498338 - RLTR28 LTR ERVL 0 524 1 5 964 210 338 26 0 chr17 49776639 49776716 -45495935 + L2 LINE L2 1215 1293 -2126 5 964 1329 85 32 0 chr17 49776773 49776961 -45495690 - B2_Mm2 SINE B2 -1 194 1 5 964 242 200 0 0 chr17 49777085 49777125 -45495526 + MTEb-int LTR MaLR 1528 1567 -13 5 964 263 189 4 0 chr17 49777121 49777175 -45495476 + MTEb LTR MaLR 9 64 -315 5 964 361 245 32 138 chr17 49777198 49777321 -45495330 - B3A SINE B2 0 198 89 5 964 997 252 58 30 chr17 49777363 49777658 -45494993 + MTEb LTR MaLR 77 379 0 5 964 502 268 22 7 chr17 49779746 49779885 -45492766 + B1F1 SINE Alu 8 148 -1 5 964 21 36 0 0 chr17 49780000 49780028 -45492623 + AT_rich Low_complexity Low_complexity 1 28 0 5 964 380 301 10 0 chr17 49780089 49780192 -45492459 + PB1D10 SINE Alu 6 109 -8 5 964 441 0 0 0 chr17 49782084 49782133 -45490518 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 964 22 0 0 0 chr17 49783966 49783988 -45488663 + AT_rich Low_complexity Low_complexity 1 22 0 5 964 270 0 0 0 chr17 49784208 49784238 -45488413 + (T)n Simple_repeat Simple_repeat 1 30 0 5 964 564 56 0 0 chr17 49784526 49784598 -45488053 + (TA)n Simple_repeat Simple_repeat 2 73 0 5 964 811 272 138 0 chr17 49784781 49785035 -45487616 - B4 SINE B4 -2 290 2 5 964 251 0 59 0 chr17 49785693 49785727 -45486924 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 5 964 1047 218 128 14 chr17 49785759 49786126 -45486525 - MTD LTR MaLR -2 417 9 5 964 2069 133 84 5 chr17 49787294 49787673 -45484978 + MTC LTR MaLR 12 420 -1 5 964 1309 240 43 34 chr17 49788083 49788433 -45484218 - ORR1E LTR MaLR -1 358 6 5 964 29 0 0 0 chr17 49788576 49788605 -45484046 + AT_rich Low_complexity Low_complexity 1 29 0 5 964 247 289 145 42 chr17 49788788 49788954 -45483697 + L3b LINE CR1 232 414 -68 5 964 459 107 0 0 chr17 49789052 49789127 -45483524 + (TG)n Simple_repeat Simple_repeat 2 76 0 5 964 396 138 0 0 chr17 49789502 49789567 -45483084 + (TA)n Simple_repeat Simple_repeat 1 65 0 5 964 704 212 43 27 chr17 49789828 49790012 -45482639 - B3A SINE B2 -1 197 11 5 964 785 133 27 18 chr17 49791262 49791484 -45481167 + GA-rich Low_complexity Low_complexity 1 223 0 5 964 4371 128 31 8 chr17 49792678 49793393 -45479258 - L1_Mur2 LINE L1 -1584 4293 3563 5 964 4744 185 79 9 chr17 49793392 49794343 -45478308 + Lx2B LINE L1 5980 6996 -4 5 964 427 311 44 22 chr17 49794364 49794499 -45478152 + RSINE1 SINE B4 4 141 -24 5 964 534 298 24 36 chr17 49794657 49794824 -45477827 - B3A SINE B2 -33 165 1 5 964 923 288 87 39 chr17 49795349 49795707 -45476944 + MTE2b LTR MaLR 1 375 -4 5 964 226 164 18 18 chr17 49797379 49797435 -45475216 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 964 961 245 44 0 chr17 49797517 49797721 -45474930 - B3 SINE B2 -3 213 1 5 964 455 257 0 0 chr17 49798751 49798857 -45473794 + RSINE1 SINE B4 15 120 -45 5 964 1122 200 122 12 chr17 49798857 49799186 -45473465 - ORR1D2 LTR MaLR -3 367 3 5 964 972 260 32 20 chr17 49799232 49799497 -45473154 + B4A SINE B4 10 278 -14 5 964 622 318 90 14 chr17 49799697 49800042 -45472609 + RLTR18B LTR ERVK 120 490 -22 5 964 780 245 34 24 chr17 49801452 49801657 -45470994 - B3 SINE B2 -8 208 2 6 964 761 233 227 90 chr17 49802083 49802625 -45470026 - RLTR18 LTR ERVK 0 616 1 6 964 1901 171 89 39 chr17 49803028 49803467 -45469184 - RMER19B LTR ERVK -6 896 436 6 964 547 236 118 0 chr17 49803485 49803612 -45469039 + ID_B1 SINE B4 80 221 -3 6 964 561 264 31 63 chr17 49803814 49804036 -45468615 - B3 SINE B2 0 216 2 6 964 1031 85 11 17 chr17 49804036 49804216 -45468435 + (TCCC)n Simple_repeat Simple_repeat 1 179 0 6 964 223 190 0 23 chr17 49804223 49804266 -45468385 + CT-rich Low_complexity Low_complexity 5 46 0 6 964 260 342 13 0 chr17 49804369 49804472 -45468179 - B1_Mur2 SINE Alu -13 107 2 6 964 361 286 40 10 chr17 49805177 49805276 -45467375 + RSINE1 SINE B4 2 103 -62 6 964 453 350 28 24 chr17 49805357 49805606 -45467045 - L1MB7 LINE L1 -64 6618 6369 6 964 591 182 0 0 chr17 49805750 49805915 -45466736 + (TG)n Simple_repeat Simple_repeat 2 166 0 6 964 424 273 154 0 chr17 49805922 49806065 -45466586 - RSINE1 SINE B4 0 165 1 6 964 319 214 137 26 chr17 49806167 49806305 -45466346 + B3A SINE B2 1 156 -39 6 964 276 314 102 6 chr17 49806510 49806686 -45465965 - L1MB7 LINE L1 -1311 5333 5141 6 964 549 268 79 62 chr17 49806785 49807012 -45465639 - B4A SINE B4 -41 251 21 6 120 1048 224 69 88 chr17 49807059 49807436 -45465215 + ORR1D2 LTR MaLR 1 370 0 6 965 449 328 75 9 chr17 49807436 49807664 -45464987 - L1MB7 LINE L1 -5650 892 650 6 965 303 325 82 72 chr17 49807902 49808194 -45464457 - L1MB7 LINE L1 -6206 336 42 6 965 736 281 87 4 chr17 49809925 49810189 -45462462 + B4A SINE B4 3 288 -4 6 965 710 245 39 103 chr17 49810760 49811070 -45461581 - B4A SINE B4 -1 291 2 6 965 184 238 0 0 chr17 49811119 49811161 -45461490 - MIRc SINE MIR -108 160 119 6 965 713 268 33 5 chr17 49811900 49812101 -45460550 + B3A SINE B2 7 216 0 6 965 1367 96 11 0 chr17 49812271 49812458 -45460193 - B2_Mm1t SINE B2 -4 189 1 6 965 1419 210 56 61 chr17 49813372 49813748 -45458903 - MTEa LTR MaLR -4 375 2 6 965 455 240 31 88 chr17 49813944 49814104 -45458547 + B3A SINE B2 24 174 -24 6 965 486 0 0 0 chr17 49815344 49815398 -45457253 + (TC)n Simple_repeat Simple_repeat 2 55 0 6 965 279 0 0 0 chr17 49815398 49815428 -45457223 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 965 429 290 150 14 chr17 49815433 49815573 -45457078 - B3A SINE B2 -38 160 2 6 965 27 62 0 0 chr17 49815666 49815714 -45456937 + AT_rich Low_complexity Low_complexity 1 48 0 6 965 241 109 36 0 chr17 49815946 49816001 -45456650 + (TA)n Simple_repeat Simple_repeat 1 57 0 6 965 286 255 100 36 chr17 49816119 49816229 -45456422 + MLT1A1 LTR MaLR 292 408 0 6 965 1776 254 82 0 chr17 49816392 49816821 -45455830 - Lx8 LINE L1 -675 6798 6335 6 965 201 313 0 0 chr17 49816922 49816989 -45455662 + GA-rich Low_complexity Low_complexity 3 69 0 6 965 205 274 33 77 chr17 49817095 49817164 -45455487 - MIRc SINE MIR -136 132 64 6 965 1656 143 83 10 chr17 49817164 49817453 -45455198 + Lx4A LINE L1 6748 7057 -1 6 965 205 274 33 77 chr17 49817453 49817474 -45455177 - MIRc SINE MIR -205 63 46 6 965 686 303 26 56 chr17 49817750 49818016 -45454635 + B4A SINE B4 5 262 -30 6 965 350 260 158 24 chr17 49818902 49819111 -45453540 + L1MC1 LINE L1 5832 6068 -265 6 965 234 0 0 0 chr17 49819200 49819226 -45453425 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 965 427 221 250 16 chr17 49819730 49819854 -45452797 + B3A SINE B2 2 154 -44 6 965 396 0 0 0 chr17 49819854 49819898 -45452753 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 965 267 283 21 11 chr17 49819919 49820012 -45452639 + L1MD2 LINE L1 6243 6336 -23 6 965 632 199 14 22 chr17 49820335 49820474 -45452177 + B3A SINE B2 3 140 -58 6 965 315 0 0 0 chr17 49820493 49820528 -45452123 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 965 378 0 0 0 chr17 49821494 49821536 -45451115 + (GA)n Simple_repeat Simple_repeat 1 42 0 6 965 207 0 0 0 chr17 49821698 49821721 -45450930 + (CAGAGA)n Simple_repeat Simple_repeat 2 24 0 6 965 679 214 14 14 chr17 49821755 49821902 -45450749 + B1_Mur1 SINE Alu 1 147 -2 6 965 213 238 95 0 chr17 49823595 49823658 -45448993 - MER5B DNA MER1_type 0 178 110 6 965 202 224 0 23 chr17 49823792 49823879 -45448772 + (TTAGGG)n Simple_repeat Simple_repeat 3 87 0 6 965 21 0 0 0 chr17 49824696 49824717 -45447934 + AT_rich Low_complexity Low_complexity 1 21 0 6 965 426 239 153 25 chr17 49824721 49824884 -45447767 - Lx8 LINE L1 0 7473 7290 6 965 1939 250 56 21 chr17 49824889 49825371 -45447280 + Lx8 LINE L1 6385 6883 -590 6 965 210 37 0 0 chr17 49825419 49825446 -45447205 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 965 581 269 111 64 chr17 49826005 49826372 -45446279 + MTE2a LTR MaLR 6 378 -41 6 965 193 211 19 19 chr17 49826790 49826843 -45445808 + MIR SINE MIR 189 241 -21 6 965 795 195 121 26 chr17 49827178 49827368 -45445283 - B3 SINE B2 -7 209 2 6 965 203 170 0 21 chr17 49827606 49827654 -45444997 + (TATG)n Simple_repeat Simple_repeat 4 50 0 6 965 653 328 11 5 chr17 49827671 49827861 -45444790 - B4A SINE B4 0 292 102 6 965 1230 201 152 18 chr17 49827978 49828093 -45444558 - ORR1D1 LTR MaLR 0 374 244 6 965 320 43 22 0 chr17 49828093 49828139 -45444512 + (CAGG)n Simple_repeat Simple_repeat 4 50 0 6 965 1230 201 152 18 chr17 49828139 49828353 -45444298 - ORR1D1 LTR MaLR -131 243 2 6 965 483 337 32 36 chr17 49828911 49829188 -45443463 + B4A SINE B4 1 276 -16 6 965 812 184 108 0 chr17 49829188 49829346 -45443305 + L1_Mur2 LINE L1 3673 3847 -2030 6 965 234 0 0 0 chr17 49829346 49829372 -45443279 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 965 667 214 28 0 chr17 49829384 49829529 -45443122 + L1_Mur2 LINE L1 4668 4816 -1064 6 965 215 61 30 0 chr17 49829840 49829873 -45442778 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 6 965 214 196 67 67 chr17 49829951 49830011 -45442640 - B3A SINE B2 -118 80 21 6 965 822 98 0 0 chr17 49830460 49830582 -45442069 + (GA)n Simple_repeat Simple_repeat 2 123 0 6 965 27 29 0 0 chr17 49831289 49831323 -45441328 + AT_rich Low_complexity Low_complexity 1 34 0 6 965 552 295 13 0 chr17 49831346 49831495 -45441156 - RSINE1 SINE B4 -2 163 13 6 965 577 172 9 2 chr17 49831686 49831808 -45440843 + B2_Mm2 SINE B2 2 127 -66 6 965 601 320 0 0 chr17 49832044 49832200 -45440451 + B3A SINE B2 1 156 -42 6 965 237 65 0 0 chr17 49832223 49832254 -45440397 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 965 603 27 0 0 chr17 49832254 49832326 -45440325 + (GA)n Simple_repeat Simple_repeat 2 74 0 6 965 576 42 0 0 chr17 49833738 49833809 -45438842 + (CA)n Simple_repeat Simple_repeat 1 71 0 6 965 21 57 0 0 chr17 49833921 49833956 -45438695 + AT_rich Low_complexity Low_complexity 1 35 0 6 965 716 291 0 10 chr17 49833959 49834157 -45438494 - B3A SINE B2 -2 196 1 6 965 787 307 59 4 chr17 49837408 49837679 -45434972 + B4A SINE B4 1 286 -6 6 965 435 92 0 0 chr17 49837709 49837774 -45434877 + (CA)n Simple_repeat Simple_repeat 2 66 0 6 965 416 328 16 16 chr17 49837904 49838093 -45434558 - ALINE LINE RTE -366 251 63 6 965 1065 199 99 115 chr17 49838420 49838603 -45434048 + ORR1D2 LTR MaLR 3 172 -198 6 965 474 18 0 0 chr17 49838603 49838658 -45433993 + (TC)n Simple_repeat Simple_repeat 2 56 0 6 965 297 0 0 0 chr17 49838659 49838692 -45433959 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 965 1065 199 99 115 chr17 49838692 49838880 -45433771 + ORR1D2 LTR MaLR 173 367 -3 6 965 234 0 0 0 chr17 49839426 49839452 -45433199 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 965 355 288 80 45 chr17 49839773 49839973 -45432678 + MTE-int LTR MaLR 1206 1412 -168 6 965 1044 153 112 0 chr17 49839996 49840192 -45432459 + URR1A DNA MER1_type 1 218 -8 6 965 260 246 244 39 chr17 49840300 49840427 -45432224 + MTEa LTR MaLR 1 153 -226 6 965 365 246 18 18 chr17 49840926 49841038 -45431613 + (TATG)n Simple_repeat Simple_repeat 4 115 0 6 965 631 256 75 10 chr17 49841606 49841807 -45430844 + B4A SINE B4 10 223 -69 6 965 615 251 264 3 chr17 49841811 49842066 -45430585 - ORR1D1 LTR MaLR -6 368 8 6 965 764 275 10 45 chr17 49842144 49842342 -45430309 - B4 SINE B4 -60 232 42 6 965 399 294 109 107 chr17 49842359 49842456 -45430195 + MTD LTR MaLR 13 120 -259 6 965 267 31 0 0 chr17 49842456 49842488 -45430163 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 965 399 294 109 107 chr17 49842488 49842576 -45430075 + MTD LTR MaLR 112 182 -197 6 965 234 62 0 0 chr17 49842576 49842608 -45430043 + (CAAG)n Simple_repeat Simple_repeat 3 34 0 6 965 377 294 109 107 chr17 49842608 49842787 -45429864 + MTD LTR MaLR 183 379 0 6 965 181 318 15 29 chr17 49842874 49842942 -45429709 + L2c LINE L2 3283 3349 -38 6 965 251 36 52 52 chr17 49843170 49843228 -45429423 + (TTTTTG)n Simple_repeat Simple_repeat 3 60 0 6 965 274 190 51 0 chr17 49843809 49843888 -45428763 + GA-rich Low_complexity Low_complexity 3 85 0 6 965 375 23 0 0 chr17 49844369 49844413 -45428238 + (TAA)n Simple_repeat Simple_repeat 2 45 0 6 965 781 277 15 27 chr17 49844420 49844683 -45427968 - MTE2a-int LTR MaLR -1320 260 1 6 965 739 243 16 22 chr17 49844681 49844866 -45427785 - MTE2a LTR MaLR -2 377 194 6 965 319 318 87 51 chr17 49845437 49845769 -45426882 - L1M5 LINE L1 -564 5630 5287 6 965 231 390 17 0 chr17 49845924 49846042 -45426609 + (TG)n Simple_repeat Simple_repeat 2 121 0 6 965 392 161 0 12 chr17 49846226 49846308 -45426343 + (TG)n Simple_repeat Simple_repeat 2 82 0 6 965 544 239 139 81 chr17 49846321 49846594 -45426057 - B4A SINE B4 0 292 4 6 965 288 0 0 0 chr17 49847182 49847214 -45425437 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 965 566 272 59 0 chr17 49847214 49847350 -45425301 - B3A SINE B2 -54 144 1 6 965 522 301 55 17 chr17 49847353 49847590 -45425061 - L1MB4 LINE L1 -41 6139 5894 6 965 184 271 17 0 chr17 49847774 49847833 -45424818 - MIRb SINE MIR -70 198 139 7 965 1017 267 21 99 chr17 49848977 49849359 -45423292 + MTE2a LTR MaLR 14 365 -14 7 965 978 289 108 19 chr17 49850159 49850530 -45422121 - MTD LTR MaLR -15 404 1 7 965 798 226 0 0 chr17 49851241 49851396 -45421255 + B3A SINE B2 1 155 -43 7 965 456 99 0 0 chr17 49851419 49851490 -45421161 + (CA)n Simple_repeat Simple_repeat 2 72 0 7 965 495 0 0 0 chr17 49851779 49851834 -45420817 + (TC)n Simple_repeat Simple_repeat 2 56 0 7 965 414 0 0 0 chr17 49851834 49851879 -45420772 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 965 711 300 60 32 chr17 49851890 49852172 -45420479 - B4A SINE B4 -2 290 1 7 965 648 236 47 0 chr17 49853010 49853158 -45419493 - B3A SINE B2 -42 156 2 7 965 643 270 38 33 chr17 49854497 49854708 -45417943 - ID_B1 SINE B4 -12 212 1 7 965 233 319 146 0 chr17 49854846 49854990 -45417661 - MIR SINE MIR -76 186 22 7 965 3472 57 7 5 chr17 49854991 49855430 -45417221 + L1Md_F2 LINE L1 6142 6581 -1 7 965 306 0 0 0 chr17 49855602 49855636 -45417015 + (GA)n Simple_repeat Simple_repeat 1 34 0 7 965 525 308 40 40 chr17 49856906 49857082 -45415569 + B3A SINE B2 7 182 -16 7 965 369 216 0 64 chr17 49857106 49857421 -45415230 + (CACCT)n Simple_repeat Simple_repeat 1 294 0 7 965 24 32 0 0 chr17 49857445 49857476 -45415175 + AT_rich Low_complexity Low_complexity 1 31 0 7 965 549 232 28 7 chr17 49857814 49857957 -45414694 + B4 SINE B4 9 154 -138 7 965 403 286 47 68 chr17 49858497 49858524 -45414127 - B2_Mm2 SINE B2 -8 187 158 7 965 267 31 0 0 chr17 49858524 49858556 -45414095 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 965 591 286 47 68 chr17 49858556 49858719 -45413932 - B3A SINE B2 -39 159 1 7 965 367 214 9 112 chr17 49858843 49858959 -45413692 - B1_Mur2 SINE Alu -9 140 37 7 965 1747 165 154 16 chr17 49859126 49859496 -45413155 + MTC LTR MaLR 1 421 0 7 965 232 254 0 0 chr17 49859654 49859709 -45412942 - L1MD LINE L1 -1911 4235 4181 7 965 335 272 18 41 chr17 49859928 49860097 -45412554 + (TATATG)n Simple_repeat Simple_repeat 2 166 0 7 965 233 328 0 0 chr17 49860322 49860383 -45412268 + (TG)n Simple_repeat Simple_repeat 2 62 0 7 965 186 43 0 0 chr17 49860616 49860639 -45412012 + (CA)n Simple_repeat Simple_repeat 1 23 0 7 965 433 254 92 180 chr17 49860639 49860883 -45411768 - B4 SINE B4 -67 225 2 7 965 371 242 182 48 chr17 49861340 49861466 -45411185 - RSINE1 SINE B4 -14 151 9 7 965 539 290 40 5 chr17 49862294 49862495 -45410156 + ID_B1 SINE B4 2 209 -15 7 965 267 279 98 21 chr17 49862497 49862640 -45410011 - Lx6 LINE L1 0 7460 7307 7 965 279 0 0 0 chr17 49862689 49862720 -45409931 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 965 579 287 18 54 chr17 49862830 49862996 -45409655 + RSINE1 SINE B4 2 161 -4 7 965 840 39 0 0 chr17 49863039 49863143 -45409508 + (CA)n Simple_repeat Simple_repeat 1 104 0 7 965 611 276 12 18 chr17 49863436 49863602 -45409049 + B3 SINE B2 48 212 -4 7 965 1481 58 15 20 chr17 49863627 49863822 -45408829 + B2_Mm2 SINE B2 2 195 0 7 965 284 360 35 79 chr17 49864249 49864451 -45408200 - ORR1E LTR MaLR -116 243 51 7 965 392 356 13 27 chr17 49864614 49864764 -45407887 - LTR33A LTR ERVL -352 168 21 7 965 243 88 0 0 chr17 49865082 49865116 -45407535 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 965 618 237 34 40 chr17 49865607 49865776 -45406875 + B3A SINE B2 2 170 -28 7 965 237 33 0 0 chr17 49865776 49865806 -45406845 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 965 235 275 24 48 chr17 49867681 49867765 -45404886 - RSINE1 SINE B4 -2 163 82 7 965 262 306 0 12 chr17 49868000 49868086 -45404565 - ID_B1 SINE B4 -49 175 91 7 965 396 55 0 0 chr17 49868543 49868598 -45404053 + (CAGAGA)n Simple_repeat Simple_repeat 3 57 0 7 965 323 193 138 123 chr17 49868750 49868841 -45403810 + B3A SINE B2 67 161 -37 7 965 573 55 0 0 chr17 49868841 49868914 -45403737 + (TA)n Simple_repeat Simple_repeat 1 73 0 7 965 323 193 138 123 chr17 49868914 49868952 -45403699 + B3A SINE B2 162 198 0 7 965 2473 133 53 8 chr17 49868995 49869390 -45403261 + MTC LTR MaLR 5 417 -4 7 965 363 294 23 0 chr17 49869816 49869973 -45402678 + L1MD LINE L1 3852 4011 -2135 7 965 2187 110 28 0 chr17 49869985 49870303 -45402348 - ORR1A2 LTR MaLR 0 327 1 7 965 333 250 52 0 chr17 49870306 49870442 -45402209 + (TCTA)n Simple_repeat Simple_repeat 2 144 0 7 965 321 82 0 0 chr17 49870450 49870499 -45402152 + (TATG)n Simple_repeat Simple_repeat 2 50 0 7 965 207 226 29 0 chr17 49870524 49870626 -45402025 + (TCTA)n Simple_repeat Simple_repeat 4 108 0 7 965 585 291 19 37 chr17 49870644 49870912 -45401739 + L1MD LINE L1 4045 4307 -1839 7 965 352 309 89 12 chr17 49870937 49871139 -45401512 + L1ME1 LINE L1 4399 4613 -1533 7 965 583 219 54 7 chr17 49871242 49871389 -45401262 + RSINE1 SINE B4 12 165 0 7 965 405 276 65 61 chr17 49871480 49871711 -45400940 + L1ME1 LINE L1 4965 5196 -950 7 965 643 277 64 35 chr17 49872019 49872333 -45400318 + L1ME1 LINE L1 5657 5979 -200 7 965 501 17 0 0 chr17 49872563 49872621 -45400030 + (TG)n Simple_repeat Simple_repeat 1 58 0 7 965 229 280 53 0 chr17 49872676 49872751 -45399900 - B4 SINE B4 -84 208 130 7 965 612 0 0 0 chr17 49872778 49872846 -45399805 + (TC)n Simple_repeat Simple_repeat 1 68 0 7 965 28 29 0 0 chr17 49873103 49873138 -45399513 + AT_rich Low_complexity Low_complexity 1 35 0 7 965 1666 200 69 0 chr17 49874063 49874423 -45398228 - MTD LTR MaLR -1 418 34 7 965 503 286 43 0 chr17 49874481 49874621 -45398030 - RSINE1 SINE B4 -12 153 8 7 965 549 298 116 27 chr17 49875145 49875404 -45397247 + B4A SINE B4 1 282 -10 7 965 417 20 0 0 chr17 49875799 49875849 -45396802 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 965 668 216 25 44 chr17 49875850 49876010 -45396641 - B3A SINE B2 -39 159 3 7 965 228 364 0 0 chr17 49876609 49876675 -45395976 - MLT1G1 LTR MaLR -69 510 445 7 965 468 273 44 51 chr17 49876886 49877044 -45395607 + RSINE1 SINE B4 3 159 -6 7 965 183 129 0 0 chr17 49877050 49877081 -45395570 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 965 554 290 6 13 chr17 49877879 49878036 -45394615 + RSINE1 SINE B4 3 158 -7 7 965 5686 122 72 5 chr17 49878572 49879469 -45393182 - RMER17B LTR ERVK 0 958 1 7 965 558 276 65 0 chr17 49880200 49880370 -45392281 - B3A SINE B2 -17 181 1 7 965 657 315 42 38 chr17 49880803 49881064 -45391587 + B4A SINE B4 1 262 -30 7 965 402 94 0 0 chr17 49881070 49881134 -45391517 + (CA)n Simple_repeat Simple_repeat 2 65 0 7 965 190 310 35 0 chr17 49881349 49881407 -45391244 - MIR3 SINE MIR -53 155 96 7 965 446 202 0 0 chr17 49881768 49881862 -45390789 + MER53 DNA hAT 2 95 -98 7 965 892 240 5 20 chr17 49882040 49882244 -45390407 - B3 SINE B2 -15 201 1 7 965 1069 269 89 20 chr17 49882266 49882615 -45390036 + MTE2b LTR MaLR 1 373 -6 7 965 333 0 0 0 chr17 49883560 49883597 -45389054 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 965 945 260 148 32 chr17 49883774 49884147 -45388504 - MTD LTR MaLR -3 416 1 7 965 425 151 0 11 chr17 49884189 49884276 -45388375 + (TG)n Simple_repeat Simple_repeat 2 87 0 7 965 276 271 84 73 chr17 49884281 49884460 -45388191 - B3A SINE B2 -16 182 2 7 965 655 264 109 11 chr17 49884481 49884665 -45387986 - B3 SINE B2 0 216 15 7 965 257 322 87 0 chr17 49885139 49885254 -45387397 - B4 SINE B4 -82 210 86 7 965 235 267 0 118 chr17 49885397 49885499 -45387152 - B3A SINE B2 0 198 109 7 965 1127 210 52 28 chr17 49885861 49885900 -45386751 - ORR1D1 LTR MaLR -76 298 262 7 965 4292 53 38 14 chr17 49885900 49886451 -45386200 + LTRIS2 LTR ERV1 1 564 0 7 965 1127 210 52 28 chr17 49886451 49886700 -45385951 - ORR1D1 LTR MaLR -113 261 3 7 965 23 0 0 0 chr17 49887624 49887647 -45385004 + AT_rich Low_complexity Low_complexity 1 23 0 7 965 8137 74 8 6 chr17 49888197 49889361 -45383290 + L1_Mus3 LINE L1 5472 6638 0 7 965 936 126 0 0 chr17 49889365 49889516 -45383135 + (GGGA)n Simple_repeat Simple_repeat 4 154 0 7 965 246 282 90 0 chr17 49890112 49890190 -45382461 + MTEa LTR MaLR 107 191 -168 7 965 408 111 0 0 chr17 49890190 49890253 -45382398 + (TCTCCC)n Simple_repeat Simple_repeat 3 65 0 7 965 448 281 22 47 chr17 49890253 49890455 -45382196 + MTEa LTR MaLR 167 367 -7 7 965 1192 267 47 53 chr17 49890540 49890920 -45381731 + MTE2a LTR MaLR 2 379 0 7 965 584 246 58 7 chr17 49890974 49891113 -45381538 + B1F SINE Alu 4 149 0 7 965 426 39 0 0 chr17 49891534 49891586 -45381065 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 965 812 290 40 11 chr17 49891632 49891904 -45380747 - B4A SINE B4 -11 281 2 7 965 477 71 0 0 chr17 49892062 49892132 -45380519 + (TG)n Simple_repeat Simple_repeat 2 71 0 7 965 874 218 5 68 chr17 49892701 49892893 -45379758 - B3A SINE B2 -18 180 1 7 965 362 289 106 103 chr17 49893753 49894187 -45378464 - RMER15 LTR ERVL -15 560 1 7 965 405 0 0 0 chr17 49894746 49894791 -45377860 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 965 454 287 0 18 chr17 49894798 49894908 -45377743 - RSINE1 SINE B4 -57 108 1 7 965 275 274 0 141 chr17 49895629 49895714 -45376937 + B3A SINE B2 1 73 -125 7 965 499 244 45 32 chr17 49895805 49895978 -45376673 + B3A SINE B2 38 208 -8 7 965 444 19 0 0 chr17 49895979 49896032 -45376619 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 7 965 183 80 0 0 chr17 49896514 49896539 -45376112 + (TG)n Simple_repeat Simple_repeat 1 25 0 7 965 363 293 10 20 chr17 49896684 49896785 -45375866 + RSINE1 SINE B4 2 101 -64 8 965 554 315 42 37 chr17 49897083 49897274 -45375377 - B4A SINE B4 -35 257 66 8 965 591 292 41 1 chr17 49897276 49897469 -45375182 - ID_B1 SINE B4 -79 213 1 8 965 461 313 42 170 chr17 49898686 49899144 -45373507 + MTD LTR MaLR 8 406 -13 8 965 414 279 56 24 chr17 49899521 49899646 -45373005 - RSINE1 SINE B4 0 165 37 8 965 255 275 65 21 chr17 49899650 49899743 -45372908 - MIRb SINE MIR -39 229 133 8 965 210 71 0 0 chr17 49900555 49900583 -45372068 + (GAAA)n Simple_repeat Simple_repeat 3 30 0 8 965 437 180 22 11 chr17 49901348 49901438 -45371213 + ID_B1 SINE B4 1 91 -133 8 965 258 32 0 0 chr17 49901443 49901474 -45371177 + (GGGTG)n Simple_repeat Simple_repeat 3 33 0 8 965 475 262 19 0 chr17 49901478 49901581 -45371070 + B3 SINE B2 3 107 -109 8 965 632 244 20 136 chr17 49901524 49901704 -45370947 + B4A SINE B4 49 202 -90 8 965 180 0 0 0 chr17 49901704 49901724 -45370927 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 8 965 632 244 20 136 chr17 49901724 49901742 -45370909 + B4A SINE B4 203 222 -70 8 965 212 143 0 23 chr17 49901745 49901788 -45370863 + (ATG)n Simple_repeat Simple_repeat 3 44 0 8 965 318 255 181 65 chr17 49901800 49901955 -45370696 + B3 SINE B2 1 173 -43 8 965 1893 181 79 16 chr17 49902473 49902854 -45369797 + MTD LTR MaLR 15 419 0 8 965 255 246 73 0 chr17 49902858 49902968 -45369683 + (TCTA)n Simple_repeat Simple_repeat 2 119 0 8 965 353 240 0 241 chr17 49903107 49903157 -45369494 + B4 SINE B4 4 47 -245 8 965 2264 117 0 63 chr17 49903157 49903540 -45369111 + RLTR15 LTR ERVK 1 359 0 8 965 353 240 0 241 chr17 49903540 49903558 -45369093 + B4 SINE B4 48 49 -243 8 965 2434 147 75 41 chr17 49903558 49904068 -45368583 - RLTR11A2 LTR ERVK 0 527 1 8 965 353 240 0 241 chr17 49904068 49904135 -45368516 + B4 SINE B4 50 107 -185 8 965 773 153 34 20 chr17 49904186 49904333 -45368318 + B1_Mur1 SINE Alu 1 149 0 8 965 251 329 114 57 chr17 49904641 49904762 -45367889 + MER53 DNA hAT 6 136 -57 8 965 218 56 28 0 chr17 49904762 49904798 -45367853 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 8 965 251 329 114 57 chr17 49904798 49904834 -45367817 + MER53 DNA hAT 137 172 -21 8 965 328 231 31 0 chr17 49904945 49905010 -45367641 + ID4_ SINE ID 16 82 -1 8 965 408 55 0 0 chr17 49905867 49905922 -45366729 + (CA)n Simple_repeat Simple_repeat 2 56 0 8 965 490 309 71 24 chr17 49906080 49906249 -45366402 - B3A SINE B2 -16 182 6 8 965 1074 271 54 34 chr17 49907554 49907852 -45364799 + ORR1D2 LTR MaLR 1 304 -66 8 965 214 237 8 50 chr17 49907852 49907972 -45364679 + (TAA)n Simple_repeat Simple_repeat 3 117 0 8 965 188 121 50 33 chr17 49907978 49908038 -45364613 + (TTATA)n Simple_repeat Simple_repeat 3 63 0 8 965 350 141 0 53 chr17 49908043 49908118 -45364533 + ORR1D2 LTR MaLR 299 369 -1 8 965 664 206 0 72 chr17 49908287 49908439 -45364212 + B1F SINE Alu 9 149 0 8 965 39 38 0 0 chr17 49909175 49909228 -45363423 + AT_rich Low_complexity Low_complexity 1 53 0 8 965 186 214 11 22 chr17 49909294 49909385 -45363266 + (TA)n Simple_repeat Simple_repeat 1 90 0 8 965 1029 186 27 0 chr17 49909400 49909588 -45363063 + B2_Mm2 SINE B2 3 195 0 8 965 303 293 115 39 chr17 49910136 49910292 -45362359 + MER58A DNA MER1_type 40 207 -17 8 965 243 280 11 21 chr17 49912211 49912306 -45360345 + Lx5 LINE L1 5782 5875 -1175 8 965 281 219 145 12 chr17 49914558 49914641 -45358010 + ORR1E LTR MaLR 266 359 0 8 965 599 287 13 0 chr17 49914831 49914988 -45357663 - RSINE1 SINE B4 -2 163 5 8 965 297 180 49 0 chr17 49914998 49915059 -45357592 - MLT1G1 LTR MaLR -324 84 21 8 965 831 21 0 0 chr17 49915160 49915257 -45357394 + (GA)n Simple_repeat Simple_repeat 2 98 0 8 965 333 0 0 0 chr17 49915257 49915294 -45357357 + (GAA)n Simple_repeat Simple_repeat 3 39 0 8 965 302 226 48 0 chr17 49915631 49915693 -45356958 + MLT1A1 LTR MaLR 21 85 -323 8 965 604 298 6 0 chr17 49915713 49915871 -45356780 + RSINE1 SINE B4 5 163 -2 8 965 356 252 18 26 chr17 49916118 49916232 -45356419 + MLT1A1 LTR MaLR 294 406 -2 8 965 536 232 42 129 chr17 49916535 49916728 -45355923 + MIR3 SINE MIR 32 207 -1 8 965 493 340 138 46 chr17 49917119 49917618 -45355033 - MLT1G1-int LTR MaLR -95 1394 850 8 965 459 268 41 0 chr17 49917623 49917746 -45354905 + B1_Mur2 SINE Alu 5 132 -17 8 965 654 301 97 15 chr17 49917760 49917966 -45354685 + B4A SINE B4 2 224 -68 8 965 222 37 0 0 chr17 49917988 49918015 -45354636 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 965 261 302 159 30 chr17 49918045 49918277 -45354374 - MLT1G1-int LTR MaLR -676 813 552 8 965 2158 194 59 36 chr17 49918475 49918865 -45353786 + RLTR20B1 LTR ERVK 77 456 -107 8 965 459 0 0 0 chr17 49918865 49918916 -45353735 + (TG)n Simple_repeat Simple_repeat 2 52 0 8 965 2158 194 59 36 chr17 49918916 49919001 -45353650 + RLTR20B1 LTR ERVK 457 562 -1 8 965 324 306 93 16 chr17 49919004 49919187 -45353464 - MLT1G1-int LTR MaLR -1236 253 57 8 965 457 295 99 58 chr17 49919479 49919755 -45352896 - MLT1G1 LTR MaLR -323 268 14 8 965 315 0 0 0 chr17 49919782 49919817 -45352834 + (TG)n Simple_repeat Simple_repeat 1 35 0 8 965 498 17 0 0 chr17 49919817 49919875 -45352776 + (GA)n Simple_repeat Simple_repeat 1 59 0 8 965 913 269 70 76 chr17 49920399 49920769 -45351882 + ORR1D2 LTR MaLR 3 370 0 8 965 4215 65 40 9 chr17 49920855 49921398 -45351253 - LTRIS2 LTR ERV1 0 564 5 8 965 369 0 0 0 chr17 49921615 49921656 -45350995 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 8 965 703 202 8 8 chr17 49922821 49922951 -45349700 + B1_Mur1 SINE Alu 1 130 -19 8 965 861 10 0 0 chr17 49922952 49923050 -45349601 + (GA)n Simple_repeat Simple_repeat 1 98 0 8 965 188 274 63 16 chr17 49923254 49923317 -45349334 - L2c LINE L2 -15 3372 3307 8 965 452 0 52 0 chr17 49923644 49923702 -45348949 + (TTTTG)n Simple_repeat Simple_repeat 2 62 0 8 965 4138 81 0 0 chr17 49923715 49924248 -45348403 - L1_Mus2 LINE L1 0 6566 6034 8 965 244 232 26 7 chr17 49924424 49924576 -45348075 + (TAGA)n Simple_repeat Simple_repeat 3 157 0 8 965 477 90 0 0 chr17 49924578 49924645 -45348006 + (TA)n Simple_repeat Simple_repeat 1 67 0 8 965 652 107 9 9 chr17 49924650 49924763 -45347888 + (TAGA)n Simple_repeat Simple_repeat 3 115 0 8 965 25 31 0 0 chr17 49925990 49926022 -45346629 + AT_rich Low_complexity Low_complexity 1 32 0 8 965 598 273 16 21 chr17 49926131 49926318 -45346333 + B3A SINE B2 32 209 -7 8 965 182 192 19 0 chr17 49926410 49926462 -45346189 + (CA)n Simple_repeat Simple_repeat 1 53 0 8 965 361 220 30 81 chr17 49926481 49926580 -45346071 + HAL1-3A_ME LINE L1 1976 2069 -789 8 965 637 220 7 29 chr17 49926623 49926759 -45345892 - B1_Mur2 SINE Alu -7 142 10 8 965 290 345 55 0 chr17 49926886 49926996 -45345655 + MIRc SINE MIR 75 190 -78 8 965 465 286 18 63 chr17 49927241 49927511 -45345140 - B4 SINE B4 -4 288 1 8 965 624 233 118 10 chr17 49927656 49927851 -45344800 + B3 SINE B2 1 216 0 8 965 267 31 0 0 chr17 49929729 49929761 -45342890 + (A)n Simple_repeat Simple_repeat 1 32 0 8 965 1534 252 33 8 chr17 49929821 49930181 -45342470 - MTEb LTR MaLR -10 369 1 8 965 350 264 64 16 chr17 49930199 49930309 -45342342 - L1MEg LINE L1 -4132 1952 1838 8 965 1233 61 0 0 chr17 49930309 49930457 -45342194 - B1_Mus1 SINE Alu 0 148 1 8 965 350 233 77 11 chr17 49930457 49930483 -45342168 - L1MEg LINE L1 -4202 1882 1852 8 965 1022 294 11 89 chr17 49931236 49931595 -45341056 + MTEb LTR MaLR 49 379 0 8 965 637 321 50 71 chr17 49932223 49932545 -45340106 - MT2A LTR ERVL -110 423 109 8 965 2204 127 6 0 chr17 49932625 49932949 -45339702 - ORR1A3 LTR MaLR 0 326 1 8 965 400 231 205 62 chr17 49933063 49933307 -45339344 + B4A SINE B4 1 279 -13 8 965 830 245 13 74 chr17 49933388 49933617 -45339034 - B3 SINE B2 0 216 2 8 965 207 0 0 0 chr17 49933678 49933701 -45338950 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 965 400 319 57 32 chr17 49933783 49934029 -45338622 - L1MC LINE L1 -2264 5618 5367 8 965 252 246 70 28 chr17 49934584 49934655 -45337996 + B4A SINE B4 190 263 -29 8 965 326 127 47 16 chr17 49934987 49935051 -45337600 + PB1D10 SINE Alu 49 114 -3 8 965 3225 118 117 36 chr17 49935135 49935691 -45336960 + MT2B LTR ERVL 1 601 0 8 965 197 65 0 31 chr17 49935779 49935811 -45336840 + (GGGA)n Simple_repeat Simple_repeat 1 31 0 8 965 354 261 89 101 chr17 49936455 49936634 -45336017 - Tigger15a DNA TcMar -29 686 510 8 965 611 277 113 20 chr17 49936692 49936939 -45335712 + B4A SINE B4 5 274 -18 8 965 369 0 0 0 chr17 49937008 49937049 -45335602 + (TAA)n Simple_repeat Simple_repeat 2 42 0 8 965 3455 173 172 40 chr17 49937303 49938159 -45334492 + RMER19B LTR ERVK 1 902 0 8 965 297 225 0 24 chr17 49938285 49938408 -45334243 + (TG)n Simple_repeat Simple_repeat 1 120 0 8 966 216 182 23 0 chr17 49940032 49940076 -45332575 + CT-rich Low_complexity Low_complexity 1 45 0 8 966 219 233 0 0 chr17 49940083 49940126 -45332525 + (CA)n Simple_repeat Simple_repeat 1 43 0 8 966 917 292 120 38 chr17 49940505 49940847 -45331804 - MTEa LTR MaLR -9 370 1 8 966 510 279 16 42 chr17 49941150 49941341 -45331310 - L1M4 LINE L1 -3340 2806 2621 8 966 23 33 0 0 chr17 49941477 49941507 -45331144 + AT_rich Low_complexity Low_complexity 1 30 0 8 966 15263 151 16 14 chr17 49941816 49943215 -45329436 + Lx2 LINE L1 1954 3361 -2525 8 966 1159 77 0 0 chr17 49943215 49943358 -45329293 + B1_Mus1 SINE Alu 2 144 -4 8 966 17738 133 34 11 chr17 49943358 49946565 -45326086 + Lx2 LINE L1 3353 6643 -354 8 966 1197 144 31 31 chr17 49946565 49946787 -45325864 + Lx2 LINE L1 6775 6996 -1 8 966 236 290 0 0 chr17 49948158 49948220 -45324431 + ID4_ SINE ID 4 65 -18 8 966 738 162 80 7 chr17 49949516 49949653 -45322998 + B1_Mur3 SINE Alu 3 149 0 8 966 4881 141 36 38 chr17 49949672 49950549 -45322102 + RMER13B LTR ERVK 1 876 -32 8 966 346 139 14 14 chr17 49950666 49950739 -45321912 + CT-rich Low_complexity Low_complexity 4 76 0 8 966 470 17 17 0 chr17 49950740 49950799 -45321852 + (TC)n Simple_repeat Simple_repeat 2 61 0 8 966 408 369 0 0 chr17 49950810 49950951 -45321700 - RSINE1 SINE B4 -22 143 3 9 966 399 274 154 19 chr17 49951685 49951841 -45320810 - MLT1L LTR MaLR -126 484 308 9 966 302 273 65 83 chr17 49951889 49952057 -45320594 + RSINE1 SINE B4 1 165 0 9 966 406 129 12 12 chr17 49952063 49952149 -45320502 + (CA)n Simple_repeat Simple_repeat 2 87 0 9 966 290 356 91 56 chr17 49952341 49952410 -45320241 + Charlie5 DNA MER1_type 6 75 -2549 9 966 2037 172 74 44 chr17 49952410 49952817 -45319834 + MTC LTR MaLR 1 419 -2 9 966 290 356 91 56 chr17 49952817 49953033 -45319618 + Charlie5 DNA MER1_type 76 301 -2323 9 966 643 310 96 75 chr17 49953006 49953359 -45319292 + Charlie5 DNA MER1_type 2180 2547 -77 9 966 719 209 29 112 chr17 49953359 49953564 -45319087 - B3A SINE B2 -10 188 1 9 966 643 310 96 75 chr17 49953564 49953639 -45319012 + Charlie5 DNA MER1_type 2548 2617 -7 9 966 306 248 82 82 chr17 49954841 49954951 -45317700 + B4A SINE B4 183 292 0 9 966 241 303 0 0 chr17 49954951 49955017 -45317634 + (CA)n Simple_repeat Simple_repeat 1 66 0 9 966 333 0 0 0 chr17 49955017 49955054 -45317597 + (TC)n Simple_repeat Simple_repeat 1 37 0 9 966 318 26 0 0 chr17 49955054 49955092 -45317559 + (CA)n Simple_repeat Simple_repeat 1 39 0 9 966 333 155 0 0 chr17 49956392 49956450 -45316201 + CT-rich Low_complexity Low_complexity 1 58 0 9 966 278 225 41 27 chr17 49956546 49956619 -45316032 + CT-rich Low_complexity Low_complexity 2 75 0 9 966 1338 110 0 25 chr17 49956938 49957134 -45315517 - B2_Mm2 SINE B2 -4 191 1 9 966 265 204 0 0 chr17 49957136 49957190 -45315461 - L1M2 LINE L1 -518 5782 5729 9 966 402 21 0 0 chr17 49957522 49957569 -45315082 + (TC)n Simple_repeat Simple_repeat 1 47 0 9 966 222 266 0 0 chr17 49957591 49957655 -45314996 + (CA)n Simple_repeat Simple_repeat 1 64 0 9 966 840 267 94 121 chr17 49959357 49959728 -45312923 - MTE2a LTR MaLR -18 361 1 9 966 226 336 63 63 chr17 49959825 49960079 -45312572 - L2 LINE L2 -1353 2066 1813 9 966 3581 178 126 92 chr17 49960620 49961492 -45311159 - RMER19B LTR ERVK 0 902 1 9 966 4940 36 2 0 chr17 49961648 49962228 -45310423 - L1Md_F2 LINE L1 0 6582 6002 9 966 1792 47 21 8 chr17 49962229 49962466 -45310185 + L1Md_F2 LINE L1 5755 5994 -590 9 966 351 0 0 0 chr17 49963224 49963263 -45309388 + (CA)n Simple_repeat Simple_repeat 1 39 0 9 966 269 26 26 0 chr17 49963434 49963472 -45309179 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 9 966 360 64 0 0 chr17 49965557 49965604 -45307047 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 966 937 276 58 14 chr17 49965629 49965905 -45306746 - B4A SINE B4 0 292 5 9 966 327 256 12 24 chr17 49966164 49966248 -45306403 + C-rich Low_complexity Low_complexity 1 83 0 9 966 737 283 16 5 chr17 49966387 49966572 -45306079 + B3 SINE B2 2 188 -28 9 966 1174 171 28 9 chr17 49967191 49967403 -45305248 + B3 SINE B2 1 216 0 9 966 299 254 42 0 chr17 49968148 49968219 -45304432 + PB1D10 SINE Alu 2 75 -42 9 966 620 305 6 32 chr17 49968246 49968402 -45304249 - ID_B1 SINE B4 -24 200 49 9 966 682 265 82 6 chr17 49970489 49970671 -45301980 + ID_B1 SINE B4 28 223 -1 9 966 1143 51 0 0 chr17 49971840 49971977 -45300674 - B1_Mus1 SINE Alu -10 138 2 9 966 284 233 0 27 chr17 49972046 49972121 -45300530 + B4A SINE B4 3 75 -217 9 966 315 0 0 0 chr17 49972152 49972187 -45300464 + (GA)n Simple_repeat Simple_repeat 2 36 0 9 966 195 42 0 0 chr17 49972239 49972263 -45300388 + (A)n Simple_repeat Simple_repeat 1 24 0 9 966 295 340 97 24 chr17 49972468 49972757 -45299894 + L1M5 LINE L1 5557 5866 -328 9 966 407 333 14 20 chr17 49972855 49973002 -45299649 + B4A SINE B4 1 146 -146 9 966 387 0 0 0 chr17 49973004 49973047 -45299604 + (CA)n Simple_repeat Simple_repeat 2 44 0 9 966 405 0 0 0 chr17 49973416 49973461 -45299190 + (GA)n Simple_repeat Simple_repeat 1 45 0 9 966 546 345 62 8 chr17 49973831 49974091 -45298560 - MT2A LTR ERVL -12 521 248 9 966 617 282 0 53 chr17 49974114 49974275 -45298376 - MTEa LTR MaLR -202 177 26 9 966 309 89 0 0 chr17 49974275 49974320 -45298331 + (CA)n Simple_repeat Simple_repeat 1 45 0 9 966 617 282 0 53 chr17 49974320 49974345 -45298306 - MTEa LTR MaLR -354 25 1 9 966 822 21 0 0 chr17 49974419 49974515 -45298136 + (CATATA)n Simple_repeat Simple_repeat 3 98 0 9 966 189 0 0 0 chr17 49975825 49975846 -45296805 + (CA)n Simple_repeat Simple_repeat 1 21 0 9 966 1031 282 0 8 chr17 49976098 49976355 -45296296 + B4A SINE B4 27 281 -11 9 966 1198 237 144 43 chr17 49976362 49976641 -45296010 + RMER5 LTR ERV1 15 342 -192 9 966 306 0 0 0 chr17 49976641 49976675 -45295976 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 9 966 1198 237 144 43 chr17 49976675 49976818 -45295833 + RMER5 LTR ERV1 343 479 -55 9 966 923 286 10 0 chr17 49978033 49978044 -45294607 - B3 SINE B2 -8 208 198 9 966 486 0 0 0 chr17 49978044 49978098 -45294553 + (TG)n Simple_repeat Simple_repeat 2 55 0 9 966 923 286 10 0 chr17 49978098 49978292 -45294359 - B3 SINE B2 -19 197 2 9 966 793 253 141 118 chr17 49979411 49979650 -45293001 + MTE2a LTR MaLR 1 213 -166 9 966 600 14 0 0 chr17 49979650 49979719 -45292932 + (TC)n Simple_repeat Simple_repeat 1 69 0 9 966 793 253 134 114 chr17 49979719 49979849 -45292802 + MTE2a LTR MaLR 214 371 -8 9 966 293 302 106 14 chr17 49979968 49980109 -45292542 + Charlie4a DNA MER1_type 230 383 -125 9 966 670 235 144 91 chr17 49981060 49981303 -45291348 + B4A SINE B4 1 256 -36 9 966 401 103 15 0 chr17 49981329 49981397 -45291254 + (CA)n Simple_repeat Simple_repeat 1 69 0 9 966 280 290 0 25 chr17 49981995 49982130 -45290521 + ID4 SINE ID 12 139 -13 9 966 2791 168 46 20 chr17 49982340 49982837 -45289814 - RMER20A LTR ERVK 0 516 7 9 966 289 242 138 132 chr17 49982966 49983118 -45289533 - RSINE1 SINE B4 -10 155 3 9 966 434 299 53 29 chr17 49985096 49985130 -45287521 - MER44D DNA MER2_type -47 658 625 9 966 243 0 0 0 chr17 49985130 49985157 -45287494 + (TCTG)n Simple_repeat Simple_repeat 4 30 0 9 966 434 299 53 29 chr17 49985157 49985329 -45287322 - MER44D DNA MER2_type -81 624 449 9 966 785 288 53 34 chr17 49985445 49985778 -45286873 - Lx8 LINE L1 -550 7146 6801 9 966 758 173 6 0 chr17 49985898 49986060 -45286591 + (CA)n Simple_repeat Simple_repeat 2 164 0 9 966 513 351 37 20 chr17 49986072 49986312 -45286339 - MER44D DNA MER2_type -2205 286 24 9 966 258 32 0 0 chr17 49986575 49986606 -45286045 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 9 966 1158 82 0 0 chr17 49987244 49987403 -45285248 + (GAAA)n Simple_repeat Simple_repeat 2 160 0 9 966 449 17 17 0 chr17 49987442 49987500 -45285151 + (TG)n Simple_repeat Simple_repeat 2 60 0 9 966 527 135 0 10 chr17 49987829 49987926 -45284725 + (TCTA)n Simple_repeat Simple_repeat 2 97 0 9 966 505 308 6 30 chr17 49987928 49988092 -45284559 - RSINE1 SINE B4 -4 161 2 9 966 228 179 0 0 chr17 49988480 49988519 -45284132 + B2_Mm1t SINE B2 2 40 -153 9 966 1004 179 104 30 chr17 49988512 49988714 -45283937 + URR1A DNA MER1_type 10 226 0 9 966 2873 46 3 11 chr17 49988839 49989188 -45283463 + ORR1A1 LTR MaLR 1 346 0 9 966 2088 107 3 63 chr17 49989339 49989689 -45282962 - ORR1A4 LTR MaLR 0 329 1 9 966 376 340 150 23 chr17 49990103 49990323 -45282328 + LTR16C LTR ERVL 192 439 -50 9 966 291 171 9 19 chr17 49990956 49991063 -45281588 + CT-rich Low_complexity Low_complexity 1 106 0 9 966 463 259 92 49 chr17 49992089 49992231 -45280420 + B1_Mur2 SINE Alu 2 149 0 9 966 921 205 92 2 chr17 49992461 49992765 -45279886 - Lx5 LINE L1 -566 6894 6455 9 966 1025 310 41 13 chr17 49992770 49993113 -45279538 + Lx5 LINE L1 6666 7058 0 9 966 860 281 24 77 chr17 49993114 49993411 -45279240 - MLT2D LTR ERVL -13 401 121 9 966 1225 45 17 11 chr17 49993422 49993601 -45279050 + (TG)n Simple_repeat Simple_repeat 1 180 0 9 966 922 273 58 61 chr17 49993682 49993975 -45278676 - B4A SINE B4 0 292 1 9 966 282 194 37 44 chr17 49993994 49994067 -45278584 - MLT2D LTR ERVL -484 72 3 9 966 201 74 0 0 chr17 49994560 49994587 -45278064 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 9 966 240 279 35 96 chr17 49994587 49994702 -45277949 - PB1D9 SINE Alu -12 108 1 9 966 323 224 75 0 chr17 49994905 49994972 -45277679 + ID4_ SINE ID 1 72 -11 9 966 396 0 0 0 chr17 49994982 49995026 -45277625 + (CA)n Simple_repeat Simple_repeat 1 44 0 9 966 680 300 65 28 chr17 49996303 49996550 -45276101 - B4 SINE B4 0 292 37 9 966 359 186 14 0 chr17 49996614 49996684 -45275967 + ID4_ SINE ID 2 72 -11 9 966 180 268 156 82 chr17 49996752 49996874 -45275777 - MIRb SINE MIR -116 152 22 9 966 546 155 0 0 chr17 49997255 49997352 -45275299 + (TCTA)n Simple_repeat Simple_repeat 1 97 0 9 966 940 228 35 0 chr17 49997352 49997549 -45275102 - B3 SINE B2 -11 205 2 9 966 759 120 0 0 chr17 49997794 49997911 -45274740 + (TA)n Simple_repeat Simple_repeat 1 117 0 9 966 505 197 169 10 chr17 49998934 49999083 -45273568 + B3A SINE B2 1 163 -53 9 966 279 0 0 0 chr17 49999084 49999115 -45273536 + (CA)n Simple_repeat Simple_repeat 2 32 0 9 966 434 114 0 11 chr17 49999115 49999180 -45273471 + (GA)n Simple_repeat Simple_repeat 1 65 0 9 966 796 44 67 24 chr17 49999180 49999344 -45273307 + (CAGAGA)n Simple_repeat Simple_repeat 4 174 0 9 966 434 114 0 11 chr17 49999344 49999367 -45273284 + (GA)n Simple_repeat Simple_repeat 2 24 0 9 966 438 225 371 0 chr17 49999478 49999656 -45272995 + RMER21B LTR ERV1 324 567 -275 9 966 405 225 34 51 chr17 49999716 49999833 -45272818 - B3 SINE B2 -14 202 88 9 966 459 35 0 0 chr17 49999833 49999890 -45272761 + (CA)n Simple_repeat Simple_repeat 2 58 0 9 966 2244 298 64 14 chr17 50000288 50001102 -45271549 - Lx7 LINE L1 -1162 6534 5680 1 966 306 0 0 0 chr17 50001427 50001461 -45271190 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 966 205 245 20 0 chr17 50001492 50001541 -45271110 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 3 966 412 184 101 10 chr17 50001600 50001699 -45270952 - PB1 SINE Alu -1 126 19 4 966 409 341 0 15 chr17 50001862 50001876 -45270775 + ID_B1 SINE B4 78 206 -18 5 966 588 231 34 0 chr17 50001876 50001993 -45270658 + B1_Mur1 SINE Alu 11 131 -18 6 966 279 160 0 0 chr17 50002024 50002099 -45270552 + GA-rich Low_complexity Low_complexity 2 76 0 7 966 198 222 0 0 chr17 50002143 50002197 -45270454 + (CATA)n Simple_repeat Simple_repeat 2 55 0 8 966 1075 172 19 118 chr17 50002197 50002467 -45270184 - ORR1C2 LTR MaLR 0 384 142 9 966 197 182 18 0 chr17 50004293 50004348 -45268303 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 966 552 173 201 8 chr17 50004348 50004482 -45268169 - RMER15 LTR ERVL -29 546 387 1 966 877 192 31 10 chr17 50004487 50004682 -45267969 - RMER15 LTR ERVL -376 199 1 1 966 264 355 0 13 chr17 50004962 50005039 -45267612 - B4A SINE B4 -165 127 52 1 966 1209 27 0 7 chr17 50005330 50005478 -45267173 + B1_Mm SINE Alu 1 147 0 1 966 237 33 0 0 chr17 50005478 50005508 -45267143 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 1 966 634 177 7 72 chr17 50005757 50005909 -45266742 + B1_Mur1 SINE Alu 5 146 -3 1 966 694 74 18 18 chr17 50005935 50006045 -45266606 + (GGGA)n Simple_repeat Simple_repeat 2 111 0 1 966 421 172 58 5 chr17 50007394 50007585 -45265066 - Lx9 LINE L1 0 7644 7395 1 966 1236 247 19 16 chr17 50007587 50007904 -45264747 - RCHARR1 DNA MER1_type -344 630 313 1 966 924 191 4 111 chr17 50008081 50008334 -45264317 + URR1A DNA MER1_type 1 226 0 1 966 540 0 0 0 chr17 50009275 50009335 -45263316 + (TC)n Simple_repeat Simple_repeat 1 60 0 2 966 453 81 0 0 chr17 50009338 50009400 -45263251 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 966 929 250 68 20 chr17 50009400 50009649 -45263002 - B4A SINE B4 -23 269 9 2 966 658 356 78 40 chr17 50013038 50013410 -45259241 + MER63B DNA AcHobo 1 386 -50 2 966 924 372 14 14 chr17 50014835 50015195 -45257456 - L4 LINE RTE -201 1828 1469 2 966 328 286 66 0 chr17 50016378 50016469 -45256182 - MTD LTR MaLR -48 371 275 2 966 1516 156 82 27 chr17 50016469 50016845 -45255806 - RMER17C LTR ERVK 0 410 14 2 966 805 229 165 12 chr17 50016819 50017067 -45255584 - MTD LTR MaLR -121 298 13 2 966 993 284 117 29 chr17 50017843 50018321 -45254330 - MLT2B1 LTR ERVL 0 520 1 2 966 186 167 0 0 chr17 50019266 50019302 -45253349 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 966 366 237 74 171 chr17 50019335 50019645 -45253006 - B4 SINE B4 -11 281 2 2 966 207 0 0 0 chr17 50019671 50019694 -45252957 + (TTGG)n Simple_repeat Simple_repeat 1 23 0 3 966 261 93 0 0 chr17 50020466 50020492 -45252159 + (TC)n Simple_repeat Simple_repeat 1 26 0 3 966 351 0 0 0 chr17 50020492 50020531 -45252120 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 966 261 93 0 0 chr17 50020531 50020547 -45252104 + (TC)n Simple_repeat Simple_repeat 1 16 0 3 966 803 169 7 0 chr17 50020656 50020792 -45251859 + B1_Mur4 SINE Alu 13 149 -1 3 966 266 328 33 66 chr17 50021085 50021297 -45251354 - LTR33 LTR ERVL -11 504 300 3 966 207 0 0 0 chr17 50021506 50021529 -45251122 + (TGGGGG)n Simple_repeat Simple_repeat 2 24 0 3 966 401 305 59 0 chr17 50021694 50021812 -45250839 + MER63A DNA AcHobo 2 126 -84 3 966 1143 80 11 11 chr17 50021973 50022151 -45250500 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 3 966 406 209 184 117 chr17 50022563 50022742 -45249909 - B3A SINE B2 0 198 8 3 966 231 304 21 32 chr17 50024502 50024597 -45248054 + MER5A DNA MER1_type 96 189 0 4 966 273 57 0 0 chr17 50025356 50025391 -45247260 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 966 277 315 60 40 chr17 50025428 50025676 -45246975 + L2 LINE L2 2810 3062 -357 4 966 253 247 26 52 chr17 50025939 50026016 -45246635 + RSINE1 SINE B4 91 165 0 4 966 458 273 29 0 chr17 50027461 50027600 -45245051 - B1F1 SINE Alu -5 144 2 4 966 387 326 75 30 chr17 50027678 50027944 -45244707 - B4 SINE B4 -12 280 3 4 966 348 232 55 118 chr17 50029630 50029757 -45242894 + URR1A DNA MER1_type 1 119 -107 4 966 532 128 85 0 chr17 50029891 50029985 -45242666 + URR1A DNA MER1_type 124 225 -1 4 966 244 246 139 54 chr17 50029985 50030019 -45242632 - CYRA11_Mm Unknown Y-chromosome -342 274 136 4 966 437 174 10 0 chr17 50030245 50030343 -45242308 + (CA)n Simple_repeat Simple_repeat 2 100 0 4 966 838 285 86 3 chr17 50030454 50030802 -45241849 - MTEa LTR MaLR -1 378 2 4 966 300 222 43 32 chr17 50031418 50031495 -45241156 + polypyrimidine Low_complexity Low_complexity 17 96 0 5 966 584 181 17 0 chr17 50031495 50031611 -45241040 - PB1D9 SINE Alu -2 118 1 5 966 300 222 43 32 chr17 50031611 50031626 -45241025 + polypyrimidine Low_complexity Low_complexity 3 16 0 5 966 570 15 0 0 chr17 50031627 50031694 -45240957 + (CA)n Simple_repeat Simple_repeat 1 67 0 5 966 380 291 0 26 chr17 50032423 50032536 -45240115 + PB1D10 SINE Alu 3 112 -5 5 966 719 288 98 15 chr17 50032545 50032883 -45239768 + L1MA4 LINE L1 5564 5929 -371 5 966 385 302 52 128 chr17 50033109 50033433 -45239218 - Charlie4a DNA MER1_type -95 413 118 5 966 1095 81 0 0 chr17 50033433 50033581 -45239070 - B1_Mus1 SINE Alu 0 148 1 5 966 385 302 52 128 chr17 50033581 50033639 -45239012 - Charlie4a DNA MER1_type -391 117 60 5 966 381 358 153 24 chr17 50033778 50034118 -45238533 - LTR75 LTR ERVL -83 479 96 5 966 743 208 18 9 chr17 50034586 50034762 -45237889 + B3A SINE B2 2 191 -4 5 966 1146 48 0 0 chr17 50034784 50034930 -45237721 - B1_Mus2 SINE Alu 0 147 2 6 966 304 227 13 13 chr17 50034958 50035034 -45237617 + BC1_Mm scRNA scRNA 2 77 -75 6 966 809 226 33 14 chr17 50036015 50036226 -45236425 + B3 SINE B2 2 216 0 6 966 719 227 6 18 chr17 50036269 50036435 -45236216 + RSINE1 SINE B4 2 165 0 6 966 412 267 113 6 chr17 50036467 50036644 -45236007 + L1MC3 LINE L1 7371 7566 -219 6 966 671 234 92 48 chr17 50036796 50037003 -45235648 + B3A SINE B2 1 216 0 6 966 546 278 46 11 chr17 50037239 50037414 -45235237 + B3A SINE B2 3 183 -15 6 966 562 178 36 131 chr17 50037436 50037604 -45235047 + B4 SINE B4 70 221 -71 6 966 1136 21 0 0 chr17 50037467 50037609 -45235042 + B1_Mm SINE Alu 6 147 0 6 966 222 171 0 0 chr17 50037609 50037650 -45235001 + A-rich Low_complexity Low_complexity 1 41 0 6 966 389 163 6 46 chr17 50037771 50037867 -45234784 + B1_Mur3 SINE Alu 2 94 -33 7 966 236 243 230 0 chr17 50039214 50039288 -45233363 - ORR1E LTR MaLR 0 359 269 7 966 225 0 0 0 chr17 50039375 50039400 -45233251 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 7 966 298 284 429 15 chr17 50040560 50040765 -45231886 - MLT1A1 LTR MaLR -65 343 54 7 966 425 308 80 52 chr17 50040784 50041034 -45231617 - MLT1A LTR MaLR -116 258 2 7 966 475 261 37 44 chr17 50041450 50041586 -45231065 + B1_Mur1 SINE Alu 4 138 -11 7 966 445 273 30 91 chr17 50042646 50042811 -45229840 + RSINE1 SINE B4 11 165 0 7 966 244 326 22 22 chr17 50043599 50043690 -45228961 - MLT1A1 LTR MaLR 0 408 318 7 966 599 276 91 55 chr17 50044398 50044651 -45228000 - MTEa LTR MaLR -116 263 2 7 966 574 184 104 0 chr17 50044936 50044953 -45227698 - B1_Mur3 SINE Alu -1 148 131 7 966 212 0 36 0 chr17 50044953 50044981 -45227670 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 8 966 574 184 104 0 chr17 50044981 50045088 -45227563 - B1_Mur3 SINE Alu -19 130 12 7 966 766 279 50 5 chr17 50045130 50045346 -45227305 + B4A SINE B4 2 227 -65 8 966 398 295 56 35 chr17 50045346 50045490 -45227161 + RSINE1 SINE B4 2 148 -17 8 966 414 0 0 0 chr17 50045715 50045761 -45226890 + (TC)n Simple_repeat Simple_repeat 1 46 0 8 966 384 362 85 5 chr17 50045787 50045987 -45226664 - MIRc SINE MIR -51 217 2 8 966 182 321 129 12 chr17 50046923 50047008 -45225643 + MIR SINE MIR 30 124 -84 8 966 387 0 0 0 chr17 50047294 50047337 -45225314 + (CA)n Simple_repeat Simple_repeat 1 43 0 8 966 23 68 0 0 chr17 50047340 50047384 -45225267 + AT_rich Low_complexity Low_complexity 1 44 0 8 966 557 14 14 0 chr17 50047828 50047898 -45224753 + (TG)n Simple_repeat Simple_repeat 1 71 0 8 966 472 282 30 15 chr17 50050310 50050443 -45222208 + RSINE1 SINE B4 12 146 -19 8 966 2663 59 2 128 chr17 50050918 50051362 -45221289 - RLTR10 LTR ERVK -2 388 1 9 966 8211 33 5 2 chr17 50051362 50052356 -45220295 - RLTR10-int LTR ERVK -1 1986 990 9 966 564 341 28 28 chr17 50052438 50052861 -45219790 - RLTR10-int LTR ERVK -5987 1594 1172 9 966 5154 79 73 104 chr17 50052886 50053875 -45218776 - RLTR10-int LTR ERVK -995 992 41 9 966 2922 65 2 32 chr17 50053887 50054287 -45218364 - RLTR10 LTR ERVK -2 388 1 9 966 3397 237 103 25 chr17 50054568 50054885 -45217766 + Lx7 LINE L1 6303 6649 -1047 9 966 3257 206 122 20 chr17 50054885 50055754 -45216897 + RMER17B LTR ERVK 1 958 0 9 966 3397 237 103 25 chr17 50055754 50056438 -45216213 + Lx7 LINE L1 6650 7382 -314 9 966 374 141 0 20 chr17 50056531 50056632 -45216019 + (CAGAGA)n Simple_repeat Simple_repeat 2 100 0 9 966 3102 92 62 9 chr17 50056633 50057084 -45215567 + IAPLTR2_Mm LTR ERVK 1 475 0 9 966 965 88 81 86 chr17 50057085 50057271 -45215380 + IAPEz-int LTR ERVK 9 193 -6288 9 966 231 327 0 0 chr17 50057271 50057326 -45215325 + RLTR27 LTR ERVK 221 275 -34 9 966 3498 57 5 0 chr17 50057326 50057893 -45214758 + IAPEz-int LTR ERVK 168 662 -5819 9 966 914 67 0 0 chr17 50057893 50058012 -45214639 + IAPEz-int LTR ERVK 1359 1477 -5004 9 966 1779 98 0 0 chr17 50058013 50058259 -45214392 + IAPEz-int LTR ERVK 2252 2497 -5183 9 966 13883 50 9 3 chr17 50058292 50060047 -45212604 + IAPEz-int LTR ERVK 4714 6479 -2 9 966 2935 92 86 9 chr17 50060049 50060490 -45212161 + IAPLTR2_Mm LTR ERVK 1 475 0 9 966 473 174 13 0 chr17 50060490 50060645 -45212006 + (CAGAGA)n Simple_repeat Simple_repeat 6 162 0 9 966 720 233 0 0 chr17 50060654 50060804 -45211847 + Lx7 LINE L1 6883 7032 -664 9 966 246 202 215 0 chr17 50060807 50060886 -45211765 + Lx7 LINE L1 7601 7696 0 9 966 1387 233 102 36 chr17 50061519 50061874 -45210777 + MTD LTR MaLR 2 379 -40 1 966 285 0 67 0 chr17 50061874 50061919 -45210732 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1 966 1387 233 102 36 chr17 50061919 50061955 -45210696 + MTD LTR MaLR 380 418 -1 1 966 295 339 140 30 chr17 50061963 50062228 -45210423 + LTR16E1 LTR ERVL 235 528 -10 1 966 725 162 200 6 chr17 50062447 50062627 -45210024 + B3 SINE B2 2 216 0 1 966 500 328 126 19 chr17 50063549 50063810 -45208841 - RMER15 LTR ERVL -14 561 273 1 966 220 296 23 69 chr17 50067223 50067310 -45205341 + MIRc SINE MIR 32 114 -154 1 966 441 289 0 0 chr17 50067350 50067445 -45205206 + B4 SINE B4 1 95 -197 1 966 403 364 45 19 chr17 50067445 50067599 -45205052 + RSINE1 SINE B4 2 159 -6 1 966 285 128 0 0 chr17 50067602 50067649 -45205002 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 966 214 234 247 0 chr17 50067691 50067768 -45204883 + MER5A DNA MER1_type 28 123 -66 1 967 585 260 160 29 chr17 50074246 50074452 -45198199 - RMER15 LTR ERVL 0 575 343 1 967 304 243 160 28 chr17 50075465 50075571 -45197080 + ID_B1 SINE B4 105 224 0 1 967 201 74 0 0 chr17 50075598 50075625 -45197026 + (GGGA)n Simple_repeat Simple_repeat 3 29 0 1 967 328 206 37 201 chr17 50075778 50075942 -45196709 - MIRb SINE MIR -125 151 15 1 967 527 139 48 0 chr17 50077130 50077296 -45195355 + (TCTCTG)n Simple_repeat Simple_repeat 2 175 0 1 967 2768 212 92 113 chr17 50077892 50078869 -45193782 - RMER17B LTR ERVK -1 957 1 1 967 197 259 87 120 chr17 50078939 50079031 -45193620 - MIRc SINE MIR -83 185 94 1 967 289 275 60 68 chr17 50079650 50079767 -45192884 + PB1D10 SINE Alu 1 116 -1 1 967 201 260 26 88 chr17 50080035 50080149 -45192502 - MIR3 SINE MIR -26 182 76 1 967 1620 15 0 0 chr17 50080249 50080801 -45191850 + (CA)n Simple_repeat Simple_repeat 1 552 0 1 967 579 361 69 23 chr17 50081083 50081389 -45191262 + MLT1J LTR MaLR 109 428 -84 1 967 617 241 43 31 chr17 50081701 50081864 -45190787 + MTEa LTR MaLR 176 340 -39 1 967 475 244 59 31 chr17 50081834 50082039 -45190612 + MTEa LTR MaLR 209 378 -1 1 967 3200 68 0 8 chr17 50082820 50083219 -45189432 - MTA_Mm LTR MaLR 0 396 1 1 967 933 254 80 13 chr17 50083662 50083961 -45188690 + Lx6 LINE L1 7116 7434 -26 1 967 2515 132 9 80 chr17 50084533 50084995 -45187656 + RLTR23 LTR ERV1 1 429 -1 1 967 1317 176 68 35 chr17 50085104 50085409 -45187242 + RLTR11A2 LTR ERVK 1 277 -164 1 967 1673 142 19 26 chr17 50085404 50085714 -45186937 + RLTR11A2 LTR ERVK 216 523 -4 1 967 1682 151 26 133 chr17 50086882 50087341 -45185310 - RMER17C LTR ERVK 0 410 1 1 967 378 260 9 94 chr17 50087723 50087829 -45184822 + B4A SINE B4 132 228 -64 1 967 577 263 180 18 chr17 50087933 50088233 -45184418 + Lx5 LINE L1 6506 6778 -272 1 967 341 231 24 30 chr17 50088234 50088399 -45184252 + (CATATA)n Simple_repeat Simple_repeat 6 169 0 1 967 25 0 0 0 chr17 50088453 50088478 -45184173 + AT_rich Low_complexity Low_complexity 1 25 0 1 967 273 308 12 71 chr17 50088483 50088567 -45184084 - ID4_ SINE ID 0 83 5 1 967 234 279 0 29 chr17 50088872 50088942 -45183709 - MIRb SINE MIR -176 92 25 1 967 416 191 46 3 chr17 50089549 50089838 -45182813 + (TG)n Simple_repeat Simple_repeat 1 301 0 1 967 425 173 51 13 chr17 50089851 50090009 -45182642 + (TG)n Simple_repeat Simple_repeat 2 165 0 1 967 331 158 61 14 chr17 50090031 50090179 -45182472 + (TG)n Simple_repeat Simple_repeat 2 156 0 1 967 707 256 60 22 chr17 50090588 50090772 -45181879 + B3A SINE B2 5 195 -3 1 967 182 171 0 28 chr17 50091802 50091838 -45180813 - L3 LINE CR1 -3319 1170 1136 1 967 336 48 0 0 chr17 50091843 50091885 -45180766 + (TC)n Simple_repeat Simple_repeat 2 43 0 1 967 452 269 160 21 chr17 50092369 50092513 -45180138 + RSINE1 SINE B4 2 165 0 1 967 1112 202 5 10 chr17 50092558 50092763 -45179888 - B3 SINE B2 -12 204 1 1 967 463 258 60 8 chr17 50092894 50093027 -45179624 + B1F SINE Alu 7 146 -3 1 967 240 378 0 0 chr17 50093180 50093299 -45179352 - L1ME3A LINE L1 -186 5987 5869 1 967 683 258 24 42 chr17 50093499 50093665 -45178986 - RSINE1 SINE B4 0 165 3 1 967 241 200 66 11 chr17 50093729 50093820 -45178831 + (TA)n Simple_repeat Simple_repeat 1 96 0 1 967 227 236 91 0 chr17 50094510 50094565 -45178086 - Cheshire DNA MER1_type -5 2415 2356 1 967 1018 44 49 0 chr17 50095090 50095295 -45177356 + (TCTA)n Simple_repeat Simple_repeat 1 215 0 1 967 752 157 29 22 chr17 50095301 50095438 -45177213 - B1_Mur2 SINE Alu -11 138 1 1 967 782 260 77 26 chr17 50095512 50095784 -45176867 + B4A SINE B4 1 286 -6 1 967 2272 76 20 3 chr17 50096182 50096487 -45176164 - ORR1A2 LTR MaLR -1 326 17 1 967 838 241 191 119 chr17 50096992 50097538 -45175113 - RMER4B LTR ERVK 0 585 1 1 967 299 154 43 58 chr17 50097864 50097933 -45174718 - ORR1C2 LTR MaLR -8 359 292 1 967 1471 190 207 15 chr17 50097939 50098330 -45174321 - Lx4B LINE L1 -18 7040 6575 1 967 1947 153 41 9 chr17 50098330 50098647 -45174004 - ORR1C2 LTR MaLR -40 327 1 1 967 482 106 31 41 chr17 50098929 50099027 -45173624 - RMER15 LTR ERVL -440 135 39 1 967 1158 126 54 16 chr17 50099501 50099686 -45172965 - MTC LTR MaLR -8 413 222 1 967 1942 187 67 15 chr17 50099679 50100081 -45172570 - ORR1C2-int LTR MaLR -1086 423 1 1 967 2008 155 70 3 chr17 50100081 50100437 -45172214 - ORR1C2 LTR MaLR 0 384 5 1 967 180 345 118 25 chr17 50100603 50100722 -45171929 + MIR SINE MIR 111 240 -22 1 967 195 309 11 110 chr17 50101024 50101115 -45171536 + MIR SINE MIR 63 144 -64 1 967 783 186 0 0 chr17 50101140 50101296 -45171355 + (TA)n Simple_repeat Simple_repeat 2 157 0 1 967 3413 31 3 0 chr17 50101513 50101897 -45170754 - IAPEY_LTR LTR ERVK 0 385 1 1 967 633 27 0 0 chr17 50105691 50105766 -45166885 + (CA)n Simple_repeat Simple_repeat 1 75 0 1 967 180 315 43 71 chr17 50105801 50105941 -45166710 - L4 LINE RTE -797 1232 1097 1 967 29 47 0 0 chr17 50108457 50108500 -45164151 + AT_rich Low_complexity Low_complexity 1 43 0 1 967 257 196 62 9 chr17 50108582 50108695 -45163956 + (TATAA)n Simple_repeat Simple_repeat 3 121 0 1 967 282 210 47 24 chr17 50108711 50108838 -45163813 + (TA)n Simple_repeat Simple_repeat 2 131 0 1 967 645 280 7 7 chr17 50108846 50108997 -45163654 - ID_B1 SINE B4 -66 158 8 1 967 343 227 241 42 chr17 50109075 50109287 -45163364 - L1MB7 LINE L1 -217 5967 5714 1 967 229 275 0 0 chr17 50109384 50109453 -45163198 - L1MB7 LINE L1 -1144 5002 4934 1 967 2297 178 6 83 chr17 50109458 50109941 -45162710 + RLTR25B LTR ERVK 1 446 -582 1 967 312 34 0 92 chr17 50110361 50110426 -45162225 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 967 556 159 60 160 chr17 50110453 50110603 -45162048 + RLTR25B LTR ERVK 632 766 -262 1 967 536 198 39 31 chr17 50110592 50110722 -45161929 + RLTR25B LTR ERVK 898 1028 0 1 967 319 164 41 0 chr17 50110773 50110846 -45161805 - RMER17C LTR ERVK -137 273 198 1 967 396 0 0 0 chr17 50110846 50110890 -45161761 + (TC)n Simple_repeat Simple_repeat 1 44 0 1 967 315 250 97 7 chr17 50111133 50111278 -45161373 - L1MB7 LINE L1 -2169 3977 3820 1 967 358 300 75 22 chr17 50111289 50111598 -45161053 - L1MB7 LINE L1 -2412 3734 3430 1 967 749 220 13 181 chr17 50111612 50111805 -45160846 - B3 SINE B2 -11 205 30 1 967 250 182 71 0 chr17 50111810 50111909 -45160742 + (TA)n Simple_repeat Simple_repeat 1 106 0 1 967 333 234 116 35 chr17 50111914 50112087 -45160564 - L1MB7 LINE L1 -2746 3400 3214 1 967 1088 84 6 61 chr17 50112966 50113131 -45159520 + B2_Mm2 SINE B2 2 157 -38 1 967 369 0 0 0 chr17 50113131 50113172 -45159479 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 1 967 261 309 74 40 chr17 50113606 50113808 -45158843 + L1MD2 LINE L1 4507 4715 -1431 1 967 612 281 100 34 chr17 50113944 50114432 -45158219 + L1MD2 LINE L1 4746 5286 -860 1 967 857 236 9 80 chr17 50114439 50114665 -45157986 + B3 SINE B2 1 210 -6 1 967 566 337 138 26 chr17 50114841 50115383 -45157268 + L1MD2 LINE L1 5468 6070 -289 1 967 962 128 0 6 chr17 50115412 50115585 -45157066 + (CA)n Simple_repeat Simple_repeat 2 173 0 1 967 23 33 0 0 chr17 50115919 50115949 -45156702 + AT_rich Low_complexity Low_complexity 1 30 0 1 967 806 286 3 1 chr17 50115982 50116163 -45156488 - B3A SINE B2 -32 184 1 1 967 369 0 0 0 chr17 50116222 50116263 -45156388 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 967 601 296 131 71 chr17 50117927 50118363 -45154288 - MER20B DNA MER1_type -76 707 246 1 967 382 250 0 0 chr17 50118814 50118894 -45153757 - MER63D DNA AcHobo -670 391 312 1 967 296 307 88 7 chr17 50120427 50120450 -45152201 + B1F SINE Alu 2 91 -58 1 967 360 320 0 0 chr17 50120450 50120550 -45152101 + ID_B1 SINE B4 111 210 -14 1 967 296 307 88 7 chr17 50120550 50120562 -45152089 + B1F SINE Alu 92 148 -1 1 967 200 193 155 17 chr17 50121180 50121238 -45151413 + L3 LINE CR1 3734 3799 -690 1 967 180 111 0 0 chr17 50122598 50122625 -45150026 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 967 799 200 96 35 chr17 50122747 50122944 -45149707 + B3 SINE B2 3 211 -5 1 967 360 43 0 0 chr17 50123285 50123331 -45149320 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 967 815 274 81 14 chr17 50123335 50123557 -45149094 - B4A SINE B4 -28 264 28 1 967 499 244 129 41 chr17 50123564 50123735 -45148916 + B3A SINE B2 3 188 -10 1 967 341 256 67 138 chr17 50123759 50124013 -45148638 - L1MC5 LINE L1 -437 7524 7289 1 967 238 194 15 15 chr17 50124380 50124448 -45148203 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 967 213 200 0 0 chr17 50124466 50124506 -45148145 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 967 216 327 179 18 chr17 50124624 50124848 -45147803 - L2 LINE L2 -1292 2127 1868 1 967 233 250 0 0 chr17 50124848 50124916 -45147735 - L1M2 LINE L1 -3595 2548 2481 1 967 21 0 0 0 chr17 50125203 50125224 -45147427 + AT_rich Low_complexity Low_complexity 1 21 0 1 967 382 257 52 137 chr17 50125226 50125266 -45147385 - B2_Mm2 SINE B2 0 195 160 1 967 279 0 0 0 chr17 50125266 50125297 -45147354 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 967 687 218 10 63 chr17 50125297 50125468 -45147183 - B3A SINE B2 -36 159 2 1 967 291 266 18 133 chr17 50126175 50126340 -45146311 + L2 LINE L2 2782 2927 -492 1 967 370 256 86 21 chr17 50127533 50127673 -45144978 + Lx9 LINE L1 1000 1148 -6460 1 967 4622 246 86 33 chr17 50127696 50128216 -45144435 + L1_Rod LINE L1 1203 1757 -4090 1 967 1166 50 0 7 chr17 50128216 50128358 -45144293 + B1_Mm SINE Alu 1 141 -6 1 967 270 0 0 0 chr17 50128361 50128391 -45144260 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1 967 4622 246 86 33 chr17 50128391 50128440 -45144211 + L1_Rod LINE L1 1758 1798 -4049 1 967 398 273 147 8 chr17 50128440 50128569 -45144082 - B1_Mur3 SINE Alu -2 147 1 2 967 4622 246 86 33 chr17 50128569 50128868 -45143783 + L1_Rod LINE L1 1799 2113 -3734 1 967 378 0 0 0 chr17 50128868 50128910 -45143741 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 967 4622 246 86 33 chr17 50128910 50129752 -45142899 + L1_Rod LINE L1 2114 3008 -2839 1 967 816 156 59 0 chr17 50129760 50129895 -45142756 + B1_Mur3 SINE Alu 1 143 -6 2 967 1825 279 77 12 chr17 50129895 50130147 -45142504 + Lx9 LINE L1 5669 5976 -1497 1 967 252 0 0 0 chr17 50130147 50130175 -45142476 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 967 3409 269 47 36 chr17 50130175 50131304 -45141347 + Lx9 LINE L1 5977 7272 -372 1 967 387 0 0 0 chr17 50131383 50131426 -45141225 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 967 379 182 57 24 chr17 50131430 50131554 -45141097 + Lx9 LINE L1 7513 7640 -4 1 967 607 194 15 8 chr17 50132118 50132248 -45140403 + B3 SINE B2 81 211 -5 2 967 259 316 50 33 chr17 50135309 50135430 -45137221 - MIRc SINE MIR -107 161 39 2 967 334 271 40 32 chr17 50136404 50136530 -45136121 + ID_B1 SINE B4 90 216 -8 2 967 414 0 0 0 chr17 50136530 50136576 -45136075 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 967 335 250 83 0 chr17 50136576 50136660 -45135991 + BC1_Mm scRNA scRNA 4 94 -58 2 967 531 234 48 10 chr17 50136787 50136936 -45135715 + B3A SINE B2 56 213 -3 2 967 360 0 0 0 chr17 50136945 50136985 -45135666 + (GGGA)n Simple_repeat Simple_repeat 3 42 0 2 967 858 235 105 48 chr17 50137491 50137804 -45134847 - RLTR15 LTR ERVK -15 344 14 2 967 357 220 127 108 chr17 50138336 50138494 -45134157 - ID_B1 SINE B4 -59 233 73 2 967 640 205 18 0 chr17 50138559 50138671 -45133980 - B3A SINE B2 -83 115 2 2 967 1097 281 65 6 chr17 50139086 50139408 -45133243 + ORR1E LTR MaLR 3 343 -16 2 967 573 101 0 0 chr17 50140475 50140574 -45132077 + (GA)n Simple_repeat Simple_repeat 1 99 0 2 967 578 225 109 29 chr17 50140575 50140749 -45131902 + B3 SINE B2 29 216 0 2 967 340 306 47 115 chr17 50140758 50141098 -45131553 - ORR1E LTR MaLR -42 317 1 2 967 291 314 39 0 chr17 50141433 50141535 -45131116 - PB1D10 SINE Alu -11 106 1 2 967 396 0 0 0 chr17 50142092 50142136 -45130515 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 967 193 254 68 0 chr17 50143059 50143118 -45129533 - MIRc SINE MIR -135 133 71 2 967 2574 186 38 4 chr17 50144411 50144887 -45127764 + RMER5 LTR ERV1 3 494 -40 2 967 180 308 0 37 chr17 50145390 50145444 -45127207 + MER5A DNA MER1_type 44 95 -94 2 967 22 0 0 0 chr17 50146959 50146981 -45125670 + AT_rich Low_complexity Low_complexity 1 22 0 2 967 3162 64 2 22 chr17 50148009 50148424 -45124227 + MTB_Mm LTR MaLR 1 407 0 2 967 532 260 134 11 chr17 50149647 50149826 -45122825 + RLTR42-int LTR ERVK 1198 1398 -4124 2 967 1243 48 7 0 chr17 50150222 50150369 -45122282 - B1_Mus1 SINE Alu 0 148 1 2 967 367 297 42 17 chr17 50150629 50150749 -45121902 + RLTR42-int LTR ERVK 1677 1799 -3723 2 967 276 241 0 0 chr17 50151613 50151692 -45120959 + GA-rich Low_complexity Low_complexity 2 80 0 2 967 1369 143 254 3 chr17 50151791 50152078 -45120573 + ORR1B2 LTR MaLR 1 359 -8 2 967 3210 63 2 5 chr17 50152160 50152557 -45120094 + MTA_Mm LTR MaLR 1 396 0 2 967 747 239 132 98 chr17 50152750 50153136 -45119515 + RLTR42-int LTR ERVK 4445 4843 -679 2 967 183 162 0 0 chr17 50153136 50153173 -45119478 + CT-rich Low_complexity Low_complexity 1 37 0 2 967 343 248 35 9 chr17 50153177 50153291 -45119360 + RLTR42-int LTR ERVK 4764 4880 -642 2 967 1900 216 63 28 chr17 50153925 50154383 -45118268 + RMER5 LTR ERV1 42 515 -19 2 967 189 0 0 0 chr17 50155200 50155221 -45117430 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 2 967 1105 338 63 38 chr17 50156004 50156203 -45116448 + MER82 DNA MER2_type 164 382 -271 2 967 521 277 43 0 chr17 50156203 50156344 -45116307 + B1_Mur1 SINE Alu 2 148 -1 2 967 1105 338 63 38 chr17 50156344 50156621 -45116030 + MER82 DNA MER2_type 383 652 -1 2 967 577 331 78 35 chr17 50156967 50157314 -45115337 + L1MC LINE L1 5355 5716 -2166 2 967 497 339 50 14 chr17 50157483 50157704 -45114947 + MLT1D LTR MaLR 14 242 -263 2 967 401 349 103 43 chr17 50157780 50158109 -45114542 + ORR1E LTR MaLR 1 349 -10 2 967 215 61 0 29 chr17 50158835 50158869 -45113782 + (TTTTTG)n Simple_repeat Simple_repeat 5 37 0 2 967 633 326 81 32 chr17 50159071 50159419 -45113232 + MLT1H LTR MaLR 1 365 -184 2 967 1271 261 63 27 chr17 50161817 50162258 -45110393 + L1MC1 LINE L1 5372 5828 -505 2 967 1110 70 0 14 chr17 50162284 50162429 -45110222 + B1_Mus1 SINE Alu 6 148 0 2 967 264 301 0 0 chr17 50162716 50162789 -45109862 - ID4_ SINE ID -10 73 1 2 967 244 231 124 80 chr17 50162789 50162902 -45109749 - YREP_Mm Unknown Unknown -1472 340 223 2 967 339 265 71 12 chr17 50162828 50162912 -45109739 + PB1D7 SINE Alu 22 110 -10 2 967 26 50 0 0 chr17 50163119 50163159 -45109492 + AT_rich Low_complexity Low_complexity 1 40 0 2 967 1175 178 40 0 chr17 50163486 50163688 -45108963 - B3 SINE B2 -5 211 2 2 967 405 0 0 0 chr17 50164121 50164166 -45108485 + (TC)n Simple_repeat Simple_repeat 2 46 0 2 967 1148 52 0 0 chr17 50164166 50164300 -45108351 - B1_Mus2 SINE Alu -12 135 2 2 967 462 79 0 0 chr17 50164797 50164860 -45107791 + (GA)n Simple_repeat Simple_repeat 2 64 0 2 967 255 311 154 51 chr17 50165266 50165422 -45107229 + MLT1E3 LTR MaLR 343 514 -110 2 967 378 0 0 0 chr17 50165426 50165468 -45107183 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 967 324 120 0 0 chr17 50165477 50165527 -45107124 + (CCTG)n Simple_repeat Simple_repeat 1 50 0 2 967 740 272 0 6 chr17 50165536 50165699 -45106952 + RSINE1 SINE B4 4 165 0 2 967 788 219 56 41 chr17 50166156 50166351 -45106300 - B3A SINE B2 0 198 1 2 967 392 252 17 67 chr17 50166371 50166490 -45106161 + B4A SINE B4 1 113 -179 2 967 5305 92 89 24 chr17 50166600 50167435 -45105216 + RMER17D LTR ERVK 1 889 0 2 967 252 181 0 9 chr17 50167819 50167874 -45104777 + L2b LINE L2 3330 3383 -4 2 967 519 366 89 37 chr17 50168147 50168530 -45104121 + MLT1L LTR MaLR 208 610 0 2 967 772 271 120 32 chr17 50168986 50169302 -45103349 - MLT2C1 LTR ERVL -43 354 11 2 967 182 91 30 0 chr17 50170062 50170095 -45102556 + (TGGGGG)n Simple_repeat Simple_repeat 5 38 0 2 967 336 216 130 30 chr17 50170926 50171026 -45101625 + PB1D10 SINE Alu 1 110 -7 2 967 394 256 0 75 chr17 50171371 50171557 -45101094 + (CAGG)n Simple_repeat Simple_repeat 4 175 0 2 967 272 319 0 0 chr17 50171653 50171725 -45100926 - ID4 SINE ID -9 74 3 2 967 404 292 62 0 chr17 50171727 50171840 -45100811 - B1F SINE Alu -2 147 28 2 967 2402 195 70 25 chr17 50171970 50172481 -45100170 + RMER5 LTR ERV1 1 534 0 2 967 358 302 21 0 chr17 50172966 50173062 -45099589 - B1F SINE Alu -51 98 1 2 967 501 17 0 0 chr17 50173269 50173327 -45099324 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 967 1686 229 51 32 chr17 50173711 50174122 -45098529 - MTD LTR MaLR 0 419 1 2 967 315 343 29 0 chr17 50175138 50175243 -45097408 + MER5A DNA MER1_type 1 108 -81 2 967 609 277 76 38 chr17 50175280 50175490 -45097161 + MLT1A LTR MaLR 75 292 -82 2 967 312 324 62 9 chr17 50177503 50177615 -45095036 - B4 SINE B4 -174 118 1 2 967 302 342 79 44 chr17 50177750 50177979 -45094672 - L1M5 LINE L1 -522 5602 5366 2 967 378 269 91 15 chr17 50178305 50178437 -45094214 + B4A SINE B4 149 290 -2 2 967 351 0 0 0 chr17 50178453 50178492 -45094159 + (TC)n Simple_repeat Simple_repeat 1 39 0 2 967 516 16 0 0 chr17 50178492 50178552 -45094099 + (CA)n Simple_repeat Simple_repeat 1 61 0 2 967 691 301 74 53 chr17 50179467 50179804 -45092847 + MTE2a LTR MaLR 34 377 -2 2 967 726 275 139 5 chr17 50180828 50181051 -45091600 + MER2 DNA MER2_type 91 343 -2 2 967 884 241 131 40 chr17 50182269 50182563 -45090088 - MTE2b LTR MaLR 0 379 68 2 967 246 308 119 30 chr17 50182928 50183062 -45089589 + ORR1E LTR MaLR 1 146 -219 2 967 1063 241 151 6 chr17 50183202 50183519 -45089132 + MT2A LTR ERVL 16 378 -155 2 967 926 235 29 5 chr17 50183616 50183821 -45088830 + B3 SINE B2 1 210 -6 2 967 1008 133 0 0 chr17 50183881 50184024 -45088627 + B1_Mus1 SINE Alu 5 147 -1 2 967 189 0 0 0 chr17 50184798 50184819 -45087832 + (T)n Simple_repeat Simple_repeat 1 21 0 2 967 393 283 208 0 chr17 50185450 50185623 -45087028 - MER3 DNA MER1_type 0 209 1 2 967 674 315 111 13 chr17 50187015 50187229 -45085422 - ID_B1 SINE B4 -37 255 25 2 967 315 0 0 0 chr17 50188090 50188125 -45084526 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 967 696 315 45 16 chr17 50188126 50188371 -45084280 - B4A SINE B4 -35 257 6 2 967 200 284 118 15 chr17 50189202 50189270 -45083381 - L2 LINE L2 -2887 532 458 2 967 210 297 40 13 chr17 50192269 50192344 -45080307 + MIR SINE MIR 126 202 -60 2 967 495 73 0 0 chr17 50192467 50192535 -45080116 + (GA)n Simple_repeat Simple_repeat 2 69 0 2 967 381 22 0 0 chr17 50195116 50195162 -45077489 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 967 370 277 64 0 chr17 50195171 50195265 -45077386 - B3A SINE B2 -93 105 6 2 967 282 260 39 0 chr17 50195283 50195360 -45077291 - PB1D9 SINE Alu -7 113 34 2 967 917 306 44 4 chr17 50195413 50195685 -45076966 - B4A SINE B4 -2 290 8 2 967 182 250 161 0 chr17 50196589 50196645 -45076006 - MIRb SINE MIR 0 268 204 2 967 213 39 0 0 chr17 50196952 50196978 -45075673 + (CAGAGA)n Simple_repeat Simple_repeat 2 27 0 2 967 207 0 0 0 chr17 50197013 50197036 -45075615 + (CAGAGA)n Simple_repeat Simple_repeat 2 24 0 2 967 729 139 0 0 chr17 50197164 50197286 -45075365 + (CA)n Simple_repeat Simple_repeat 2 123 0 2 967 331 290 100 0 chr17 50198072 50198172 -45074479 + MER5A DNA MER1_type 5 114 -75 2 967 1331 20 0 0 chr17 50198463 50198610 -45074041 - B1_Mus2 SINE Alu 0 147 1 3 967 324 0 0 0 chr17 50199603 50199639 -45073012 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 967 564 240 60 60 chr17 50199914 50200096 -45072555 + MLT2C2 LTR ERVL 8 189 -275 3 120 346 311 57 13 chr17 50200538 50200716 -45071935 + B3A SINE B2 2 193 -2 3 968 939 64 38 0 chr17 50201123 50201280 -45071371 + (TGG)n Simple_repeat Simple_repeat 1 163 0 3 968 311 45 0 22 chr17 50201293 50201339 -45071312 + (TGG)n Simple_repeat Simple_repeat 3 47 0 3 968 685 278 18 26 chr17 50201841 50202070 -45070581 + RLTR11A2 LTR ERVK 1 227 -300 3 968 673 324 83 14 chr17 50202346 50202694 -45069957 + Lx9 LINE L1 7076 7447 -197 3 968 402 21 0 0 chr17 50202694 50202741 -45069910 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 968 25 31 0 0 chr17 50202848 50202880 -45069771 + AT_rich Low_complexity Low_complexity 1 32 0 3 968 270 211 0 0 chr17 50202899 50202951 -45069700 - MLT1M LTR MaLR -489 183 132 3 968 952 254 95 119 chr17 50203629 50203900 -45068751 - MTE2a LTR MaLR 0 379 116 3 968 3416 40 2 5 chr17 50203900 50204297 -45068354 + MTA_Mm LTR MaLR 1 396 0 3 968 952 254 95 119 chr17 50204297 50204413 -45068238 - MTE2a LTR MaLR -264 115 1 3 968 280 318 30 53 chr17 50204431 50204564 -45068087 - MIR SINE MIR -115 147 18 3 968 1095 70 0 7 chr17 50204733 50204877 -45067774 + B1_Mus1 SINE Alu 6 148 0 3 968 928 257 65 122 chr17 50204872 50205240 -45067411 - MTE2a LTR MaLR -30 349 3 3 968 852 221 127 74 chr17 50205240 50205579 -45067072 + MTD LTR MaLR 47 405 -14 3 968 474 288 24 8 chr17 50205663 50205789 -45066862 - B1F SINE Alu -21 128 1 3 968 223 28 27 27 chr17 50206069 50206106 -45066545 + (TGGG)n Simple_repeat Simple_repeat 2 38 0 3 968 294 309 40 0 chr17 50206952 50207104 -45065547 - Lx9 LINE L1 -154 7490 7333 3 968 296 292 92 61 chr17 50207239 50207538 -45065113 + MLT1G1 LTR MaLR 19 279 -312 3 968 214 167 23 23 chr17 50207751 50207794 -45064857 - B1F SINE Alu -102 47 5 3 968 259 269 161 22 chr17 50208040 50208177 -45064474 - MamRep434 DNA TcMar -269 157 2 3 968 22 0 0 0 chr17 50208843 50208865 -45063786 + AT_rich Low_complexity Low_complexity 1 22 0 3 968 182 150 0 24 chr17 50209109 50209150 -45063501 + A-rich Low_complexity Low_complexity 3 42 0 3 968 496 282 0 0 chr17 50209938 50210041 -45062610 + B1F2 SINE Alu 17 119 -30 3 968 227 31 31 0 chr17 50210049 50210081 -45062570 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 3 968 1057 255 153 28 chr17 50210946 50211273 -45061378 + ORR1D2 LTR MaLR 1 368 -2 3 968 432 284 75 86 chr17 50211615 50211893 -45060758 + B4A SINE B4 1 275 -17 3 968 254 222 139 83 chr17 50212154 50212262 -45060389 + PB1D10 SINE Alu 3 116 -1 3 968 309 212 116 2 chr17 50212768 50212865 -45059786 - PB1D7 SINE Alu -42 107 1 3 968 233 246 29 44 chr17 50212806 50212874 -45059777 - ID_B1 SINE B4 -82 142 76 3 968 511 189 104 35 chr17 50213352 50213424 -45059227 + PB1 SINE Alu 5 75 -52 3 968 1212 41 0 7 chr17 50213424 50213572 -45059079 + B1_Mus1 SINE Alu 2 148 0 3 968 511 189 104 35 chr17 50213572 50213614 -45059037 + PB1 SINE Alu 76 126 -1 3 968 228 344 32 53 chr17 50213642 50213737 -45058914 + B4 SINE B4 34 126 -166 3 968 22807 20 26 1 chr17 50213787 50216490 -45056161 - IAPEz-int LTR ERVK -490 7091 3210 3 968 6511 106 111 72 chr17 50216489 50217746 -45054905 - IAPEz-int LTR ERVK -5168 1313 8 3 968 2939 16 5 83 chr17 50217746 50218144 -45054507 - IAPLTR1_Mm LTR ERVK 0 367 1 3 968 253 245 0 0 chr17 50218144 50218193 -45054458 + B4A SINE B4 225 273 -19 3 968 27 49 0 0 chr17 50218484 50218525 -45054126 + AT_rich Low_complexity Low_complexity 1 41 0 3 968 1281 34 0 0 chr17 50218726 50218873 -45053778 - B1_Mus2 SINE Alu 0 147 1 3 968 284 277 0 0 chr17 50218966 50219031 -45053620 - RSINE1 SINE B4 -98 67 3 3 968 1145 52 0 0 chr17 50219052 50219188 -45053463 + B1_Mus2 SINE Alu 2 137 -10 3 968 234 0 0 0 chr17 50219189 50219215 -45053436 + (CAAAC)n Simple_repeat Simple_repeat 2 27 0 3 968 201 74 0 0 chr17 50220040 50220067 -45052584 + (TCCC)n Simple_repeat Simple_repeat 3 29 0 3 968 330 26 0 0 chr17 50220071 50220110 -45052541 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 3 968 269 219 31 0 chr17 50220369 50220433 -45052218 + B3A SINE B2 1 66 -132 3 968 1473 208 72 22 chr17 50220441 50220813 -45051838 - MTD LTR MaLR -14 405 11 3 968 336 271 0 0 chr17 50221444 50221514 -45051137 - ID4_ SINE ID -12 71 2 3 968 446 161 80 70 chr17 50221519 50221619 -45051032 - PB1D10 SINE Alu -8 109 9 3 968 296 253 91 40 chr17 50221534 50221633 -45051018 - ID_B1 SINE B4 -48 176 73 3 968 270 0 0 0 chr17 50224683 50224713 -45047938 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 968 921 277 23 9 chr17 50224744 50224959 -45047692 + ID_B1 SINE B4 7 224 0 3 968 1585 120 54 65 chr17 50225353 50225647 -45047004 + RLTR20A LTR ERVK 2 292 -249 3 968 255 61 0 0 chr17 50226181 50226214 -45046437 + (TATG)n Simple_repeat Simple_repeat 2 34 0 3 968 1326 131 116 18 chr17 50226316 50226578 -45046073 + RLTR9C LTR ERVK 1 312 -125 3 968 208 222 0 27 chr17 50226578 50226652 -45045999 + GA-rich Low_complexity Low_complexity 4 75 0 3 968 538 296 70 38 chr17 50227150 50227308 -45045343 + RSINE1 SINE B4 3 165 0 3 968 303 28 0 0 chr17 50227317 50227353 -45045298 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 968 697 98 28 33 chr17 50227857 50228037 -45044614 + (CA)n Simple_repeat Simple_repeat 2 180 0 3 968 605 249 35 81 chr17 50228570 50228767 -45043884 + B4 SINE B4 36 223 -69 3 968 780 59 0 0 chr17 50228792 50228894 -45043757 + (TC)n Simple_repeat Simple_repeat 1 102 0 3 968 276 30 0 0 chr17 50228894 50228926 -45043725 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 968 439 276 181 62 chr17 50229002 50229311 -45043340 - MTD LTR MaLR -73 346 1 3 968 315 346 31 46 chr17 50230385 50230579 -45042072 - L2 LINE L2 -852 2567 2377 3 968 873 304 5 0 chr17 50230579 50230796 -45041855 + ID_B1 SINE B4 4 221 -3 3 968 405 177 0 0 chr17 50230801 50230880 -45041771 + GA-rich Low_complexity Low_complexity 2 80 0 3 968 272 164 148 0 chr17 50230903 50230964 -45041687 - L2 LINE L2 -1061 2358 2289 3 968 1101 211 30 26 chr17 50232155 50232388 -45040263 + MTD LTR MaLR 1 234 -185 3 968 428 195 131 147 chr17 50232440 50232638 -45040013 + B3A SINE B2 2 196 -2 3 968 24 0 0 0 chr17 50232638 50232662 -45039989 + AT_rich Low_complexity Low_complexity 1 24 0 3 968 540 0 0 0 chr17 50233296 50233356 -45039295 + (GA)n Simple_repeat Simple_repeat 1 60 0 3 968 830 263 0 30 chr17 50234296 50234496 -45038155 + B3 SINE B2 2 195 -21 3 968 326 318 16 23 chr17 50234562 50234691 -45037960 - MER5A1 DNA MER1_type -6 160 33 3 968 395 341 107 62 chr17 50235062 50235353 -45037298 - Charlie7 DNA MER1_type -1933 679 376 3 968 698 238 46 0 chr17 50235535 50235686 -45036965 + B3A SINE B2 20 177 -21 3 968 26 50 0 0 chr17 50235698 50235738 -45036913 + AT_rich Low_complexity Low_complexity 1 40 0 3 968 316 333 151 49 chr17 50236147 50236380 -45036271 + L1MD LINE L1 4516 4776 -1370 3 968 300 246 29 0 chr17 50236380 50236449 -45036202 + ID2 SINE ID 2 72 -11 3 968 316 333 151 49 chr17 50236449 50236499 -45036152 + L1MD LINE L1 4777 4828 -1318 3 968 870 233 10 15 chr17 50236507 50236703 -45035948 + B3A SINE B2 2 196 -2 3 968 440 333 138 16 chr17 50236876 50237065 -45035586 + MER20 DNA MER1_type 7 218 -1 3 968 374 53 0 21 chr17 50238229 50238292 -45034359 + B1_Mur4 SINE Alu 59 146 -4 3 968 1218 75 0 0 chr17 50240068 50240435 -45032216 + (TG)n Simple_repeat Simple_repeat 1 367 0 3 968 505 284 81 0 chr17 50241999 50242147 -45030504 + RSINE1 SINE B4 2 161 -4 3 968 291 294 41 52 chr17 50242357 50242454 -45030197 + Tigger1 DNA MER2_type 28 123 -2295 3 968 433 273 50 129 chr17 50242447 50242687 -45029964 + Tigger1 DNA MER2_type 2184 2404 -14 3 968 1013 108 23 0 chr17 50242726 50242902 -45029749 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 3 968 433 289 69 14 chr17 50244072 50244216 -45028435 + MER5A1 DNA MER1_type 9 160 -6 3 968 244 261 91 134 chr17 50244715 50244901 -45027750 + RLTR14 LTR ERV1 165 342 -40 3 968 468 231 36 18 chr17 50245479 50245589 -45027062 - ID_B1 SINE B4 -34 190 79 3 968 221 230 0 91 chr17 50245817 50245927 -45026724 + G-rich Low_complexity Low_complexity 1 100 0 3 968 210 250 188 0 chr17 50247025 50247089 -45025562 - PB1D7 SINE Alu -11 109 34 3 968 342 0 0 0 chr17 50247224 50247262 -45025389 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 968 442 263 0 10 chr17 50247286 50247386 -45025265 + PB1D10 SINE Alu 17 115 -2 3 968 1296 7 0 0 chr17 50247494 50247644 -45025007 + L1Md_A LINE L1 6433 6582 0 3 968 419 313 9 9 chr17 50249357 50249473 -45023178 - B1F SINE Alu -24 125 10 3 968 837 117 0 0 chr17 50249674 50249802 -45022849 + (TTC)n Simple_repeat Simple_repeat 1 128 0 3 968 357 82 0 0 chr17 50249802 50249851 -45022800 + (TCCC)n Simple_repeat Simple_repeat 2 50 0 3 968 209 211 39 0 chr17 50251217 50251269 -45021382 + GA-rich Low_complexity Low_complexity 2 55 0 3 968 633 122 0 0 chr17 50251657 50251772 -45020879 + (CA)n Simple_repeat Simple_repeat 2 116 0 3 968 281 343 0 0 chr17 50251933 50252000 -45020651 + ID4 SINE ID 6 72 -11 3 968 686 240 68 0 chr17 50252076 50252222 -45020429 + RSINE1 SINE B4 9 164 -1 3 968 445 197 112 24 chr17 50252801 50252926 -45019725 - L1MB3 LINE L1 -2 6181 6046 3 968 1603 217 78 24 chr17 50253444 50253826 -45018825 + MTD LTR MaLR 1 403 -16 3 968 1367 82 22 0 chr17 50254437 50254619 -45018032 + B2_Mm1a SINE B2 1 186 -7 3 968 539 287 0 96 chr17 50254747 50254943 -45017708 - ID_B1 SINE B4 0 224 58 4 968 215 174 0 167 chr17 50255987 50256125 -45016526 + (CAGGA)n Simple_repeat Simple_repeat 5 119 0 4 968 1749 180 145 89 chr17 50257233 50257696 -45014955 + MT2A LTR ERVL 1 489 -44 4 968 395 211 33 18 chr17 50257702 50257978 -45014673 + (TA)n Simple_repeat Simple_repeat 1 280 0 4 968 327 132 0 9 chr17 50257978 50258060 -45014591 + MT2A LTR ERVL 467 551 -4 4 968 1550 244 89 22 chr17 50258359 50259402 -45013249 + L1_Mur3 LINE L1 901 2049 -3831 4 968 719 169 92 0 chr17 50259860 50259990 -45012661 + RSINE1 SINE B4 2 143 -22 4 968 486 0 0 0 chr17 50260008 50260062 -45012589 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 4 968 569 240 114 98 chr17 50261398 50261607 -45011044 + B4A SINE B4 4 231 -61 4 968 414 0 0 0 chr17 50261607 50261653 -45010998 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 968 569 240 114 98 chr17 50261653 50261697 -45010954 + B4A SINE B4 232 261 -31 4 968 426 248 38 0 chr17 50262879 50262984 -45009667 - MTEa LTR MaLR -6 373 265 4 968 468 299 22 0 chr17 50262986 50263123 -45009528 + ID_B1 SINE B4 76 215 -9 4 968 274 309 176 44 chr17 50263198 50263357 -45009294 - Charlie1 DNA MER1_type -2537 244 65 4 968 247 158 12 35 chr17 50263476 50263561 -45009090 + (TG)n Simple_repeat Simple_repeat 2 84 0 4 968 418 256 73 0 chr17 50263589 50263696 -45008955 - B1F SINE Alu -4 116 1 4 968 962 205 27 41 chr17 50263732 50263951 -45008700 + B3 SINE B2 1 216 0 4 968 182 362 177 21 chr17 50264182 50264323 -45008328 + MIR SINE MIR 2 164 -98 4 968 259 312 0 0 chr17 50264521 50264601 -45008050 + (CATG)n Simple_repeat Simple_repeat 1 80 0 4 968 878 312 12 16 chr17 50264607 50264861 -45007790 - B4A SINE B4 -39 253 1 4 968 1022 251 131 6 chr17 50265161 50265498 -45007153 + MTEb LTR MaLR 1 379 0 4 968 2153 149 2 68 chr17 50265508 50265932 -45006719 - RMER10B LTR ERVL 0 398 3 4 968 1183 284 53 28 chr17 50265997 50266391 -45006260 + MLT1A1 LTR MaLR 5 408 0 4 968 250 189 69 42 chr17 50266391 50266463 -45006188 - L2a LINE L2 -20 3406 3333 4 968 207 394 10 0 chr17 50267225 50267329 -45005322 + (TG)n Simple_repeat Simple_repeat 2 106 0 4 968 225 300 86 0 chr17 50267335 50267405 -45005246 - RSINE1 SINE B4 -83 82 7 4 968 737 310 14 60 chr17 50269402 50269687 -45002964 + B4A SINE B4 8 279 -13 4 968 334 341 31 31 chr17 50269646 50269773 -45002878 - ID_B1 SINE B4 -62 162 36 4 968 471 231 133 23 chr17 50270017 50270190 -45002461 - L1MEg LINE L1 -4916 1168 977 4 968 245 235 163 87 chr17 50270257 50270509 -45002142 - L1MEg LINE L1 -5234 850 580 4 968 279 0 0 0 chr17 50270515 50270546 -45002105 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 968 551 309 39 24 chr17 50270929 50271135 -45001516 + MER58A DNA MER1_type 1 209 -15 4 968 741 70 0 0 chr17 50271684 50271784 -45000867 + (CA)n Simple_repeat Simple_repeat 1 100 0 4 968 404 228 6 0 chr17 50272039 50272069 -45000582 + polypurine Low_complexity Low_complexity 2 31 0 4 968 315 0 0 0 chr17 50272069 50272104 -45000547 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 968 404 228 6 0 chr17 50272104 50272231 -45000420 + GA-rich Low_complexity Low_complexity 32 159 0 4 968 502 156 84 18 chr17 50272385 50272537 -45000114 + B3 SINE B2 28 179 -16 4 968 918 300 10 74 chr17 50272583 50272893 -44999758 + B4A SINE B4 1 290 -2 4 968 508 294 82 99 chr17 50273267 50273622 -44999029 + MLT1H2 LTR MaLR 141 486 -3 4 968 324 236 0 6 chr17 50275929 50276092 -44996559 + (TG)n Simple_repeat Simple_repeat 1 161 0 4 968 556 303 32 13 chr17 50276095 50276249 -44996402 - RSINE1 SINE B4 0 165 9 4 968 553 289 101 54 chr17 50277201 50277479 -44995172 + B4 SINE B4 2 292 0 4 968 237 246 18 0 chr17 50277559 50277616 -44995035 + L1MEb LINE L1 27 84 -5986 4 968 260 337 46 72 chr17 50277789 50278093 -44994558 + L1MEb LINE L1 344 639 -5431 4 968 1338 223 138 5 chr17 50278202 50278571 -44994080 + MTD LTR MaLR 1 418 -1 4 968 2146 214 212 70 chr17 50278572 50279673 -44992978 + MTD-int LTR MaLR 1 1258 0 4 968 1466 226 147 3 chr17 50279682 50280037 -44992614 + MTD LTR MaLR 14 419 0 4 968 1059 205 29 0 chr17 50280138 50280348 -44992303 + B3 SINE B2 1 216 0 4 968 293 68 23 0 chr17 50280957 50281001 -44991650 + (CACCAT)n Simple_repeat Simple_repeat 3 47 0 4 968 1260 84 0 0 chr17 50281005 50281184 -44991467 + (CCA)n Simple_repeat Simple_repeat 1 179 0 4 968 218 119 0 45 chr17 50281184 50281228 -44991423 + (CAT)n Simple_repeat Simple_repeat 3 44 0 4 968 242 204 20 0 chr17 50281276 50281325 -44991326 - MTE2b LTR MaLR -2 357 308 4 968 431 257 48 0 chr17 50281323 50281428 -44991223 - MTE2b LTR MaLR -269 110 1 4 968 197 250 165 74 chr17 50282610 50282731 -44989920 + MIR3 SINE MIR 12 143 -65 4 968 2166 187 134 25 chr17 50283286 50283802 -44988849 + RMER15 LTR ERVL 3 574 -1 4 968 2214 258 14 9 chr17 50283853 50284413 -44988238 + RMER15-int LTR ERVL 69 631 -4368 4 968 891 270 169 15 chr17 50284405 50284876 -44987775 + RMER15-int LTR ERVL 762 1305 -3694 4 968 3341 243 88 19 chr17 50284899 50285106 -44987545 + RMER15-int LTR ERVL 1359 1573 -3426 4 968 282 29 0 0 chr17 50285106 50285141 -44987510 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 968 3341 243 88 19 chr17 50285141 50285908 -44986743 + RMER15-int LTR ERVL 1574 2400 -2599 4 968 1229 237 10 36 chr17 50285975 50286281 -44986370 + RMER15-int LTR ERVL 4139 4436 -563 4 968 360 257 27 54 chr17 50286304 50286415 -44986236 + RMER15-int LTR ERVL 4847 4954 -45 4 968 1904 190 122 117 chr17 50286420 50286992 -44985659 + RMER15 LTR ERVL 1 575 0 4 968 360 111 0 0 chr17 50287969 50288023 -44984628 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 968 183 118 0 89 chr17 50290215 50290271 -44982380 + GA-rich Low_complexity Low_complexity 4 54 0 4 968 297 301 97 9 chr17 50290737 50290851 -44981800 + LTR16A1 LTR ERVL 35 158 -298 4 968 237 259 91 34 chr17 50290919 50291007 -44981644 + LTR33B LTR ERVL 7 99 -404 4 968 383 270 17 17 chr17 50291011 50291128 -44981523 - MIR SINE MIR -127 135 19 4 968 4018 152 113 58 chr17 50291170 50292014 -44980637 - RMER19B LTR ERVK -12 890 1 4 968 579 289 100 64 chr17 50292075 50292453 -44980198 - MLT1F2 LTR MaLR -54 506 63 4 968 182 333 72 0 chr17 50292483 50292552 -44980099 - MIRm SINE MIR -175 101 28 4 968 2004 264 137 74 chr17 50292713 50293080 -44979571 + Lx8 LINE L1 6311 6656 -817 4 968 7958 29 0 0 chr17 50293080 50293991 -44978660 + L1Md_T LINE L1 5672 6582 0 4 968 2004 264 137 74 chr17 50293991 50294716 -44977935 + Lx8 LINE L1 6657 7472 -1 4 968 197 83 28 0 chr17 50295424 50295460 -44977191 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 4 968 551 149 11 24 chr17 50295464 50295578 -44977073 - B1_Mus2 SINE Alu 0 149 40 4 968 674 235 0 57 chr17 50296174 50296332 -44976319 - RSINE1 SINE B4 -13 152 4 4 968 652 290 23 17 chr17 50297547 50297719 -44974932 + B4 SINE B4 97 269 -23 4 968 351 0 0 0 chr17 50297719 50297758 -44974893 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 968 438 53 0 0 chr17 50297758 50297815 -44974836 + (GA)n Simple_repeat Simple_repeat 1 57 0 4 968 389 55 0 0 chr17 50299663 50299718 -44972933 - 4.5SRNA scRNA scRNA -39 55 1 4 968 653 248 50 0 chr17 50299761 50299902 -44972749 + B1_Mur1 SINE Alu 2 149 0 4 968 759 258 7 7 chr17 50299920 50300072 -44972579 + RSINE1 SINE B4 14 165 0 4 968 284 339 32 16 chr17 50300285 50300411 -44972240 + MER5A DNA MER1_type 6 133 -56 4 968 271 204 0 90 chr17 50301342 50301498 -44971153 + (TTATA)n Simple_repeat Simple_repeat 5 146 0 4 968 240 111 0 0 chr17 50301507 50301543 -44971108 + (TAA)n Simple_repeat Simple_repeat 1 36 0 4 968 682 302 50 41 chr17 50301546 50301767 -44970884 + ID_B1 SINE B4 2 224 0 4 968 254 287 156 9 chr17 50301863 50301986 -44970665 + L1M5 LINE L1 5534 5672 -492 4 968 756 126 0 0 chr17 50301986 50302137 -44970514 + (CA)n Simple_repeat Simple_repeat 2 152 0 4 968 254 287 156 9 chr17 50302137 50302231 -44970420 + L1M5 LINE L1 5673 5782 -382 4 968 324 155 0 0 chr17 50303130 50303201 -44969450 + (TCTG)n Simple_repeat Simple_repeat 4 74 0 4 968 360 258 0 0 chr17 50303253 50303420 -44969231 + (TG)n Simple_repeat Simple_repeat 2 168 0 4 968 635 309 137 27 chr17 50303487 50303750 -44968901 - B4A SINE B4 0 292 1 4 968 4540 151 85 8 chr17 50304028 50304850 -44967801 + RLTR25A LTR ERVK 219 1103 0 4 968 180 0 0 0 chr17 50305295 50305315 -44967336 + (TGGGGG)n Simple_repeat Simple_repeat 1 20 0 4 968 842 286 106 72 chr17 50305341 50305718 -44966933 + RMER15 LTR ERVL 186 575 0 4 968 320 265 71 0 chr17 50305786 50305884 -44966767 + PB1D7 SINE Alu 1 105 -15 4 968 189 107 0 0 chr17 50305893 50305921 -44966730 + (CAG)n Simple_repeat Simple_repeat 2 29 0 4 968 186 43 0 0 chr17 50306087 50306110 -44966541 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 968 235 333 19 29 chr17 50306369 50306474 -44966177 - MTEb LTR MaLR -162 217 114 4 968 279 220 0 204 chr17 50306664 50306767 -44965884 + RLTR33 LTR ERVK 450 531 -147 4 968 384 322 47 34 chr17 50307142 50307290 -44965361 - ORR1E LTR MaLR -183 176 27 4 968 2030 110 15 62 chr17 50307705 50308045 -44964606 - ORR1A4 LTR MaLR -5 324 1 4 968 273 296 0 24 chr17 50308108 50308191 -44964460 - PB1D10 SINE Alu -28 89 9 4 968 399 89 0 0 chr17 50309054 50309110 -44963541 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 968 311 65 22 0 chr17 50309431 50309477 -44963174 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 968 341 250 188 0 chr17 50310271 50310399 -44962252 + HAL1-3A_ME LINE L1 2284 2435 -423 4 968 507 56 0 0 chr17 50310751 50310822 -44961829 + (TC)n Simple_repeat Simple_repeat 1 71 0 4 968 279 0 0 0 chr17 50311338 50311369 -44961282 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 968 955 230 5 21 chr17 50311370 50311561 -44961090 - B3 SINE B2 -28 188 1 4 968 2353 144 11 5 chr17 50312015 50312391 -44960260 - ORR1C1 LTR MaLR 0 378 1 4 968 432 0 0 0 chr17 50312442 50312490 -44960161 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 968 1250 61 0 11 chr17 50313025 50313207 -44959444 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 968 356 220 60 146 chr17 50313250 50313420 -44959231 - B4A SINE B4 -5 287 111 4 968 361 231 77 3 chr17 50314799 50314908 -44957743 + B1_Mur3 SINE Alu 14 128 -21 4 968 928 25 0 16 chr17 50315157 50315278 -44957373 + (GGGAGA)n Simple_repeat Simple_repeat 3 121 0 4 968 635 332 122 21 chr17 50316565 50316861 -44955790 + MLT1F LTR MaLR 57 370 -178 5 968 261 275 38 0 chr17 50316861 50316941 -44955710 - ID4 SINE ID 0 83 1 5 968 635 332 122 21 chr17 50316941 50317071 -44955580 + MLT1F LTR MaLR 371 526 -22 5 968 2852 174 29 86 chr17 50317078 50317705 -44954946 + RMER19C LTR ERVK 1 591 -20 5 968 261 0 0 0 chr17 50317836 50317865 -44954786 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 968 456 296 56 74 chr17 50318010 50318225 -44954426 - MLT1F LTR MaLR -249 299 89 5 968 404 312 78 81 chr17 50318784 50319091 -44953560 - MER119 DNA MER1_type -28 555 250 5 968 378 211 127 9 chr17 50320630 50320740 -44951911 - B1F SINE Alu -13 136 14 5 968 854 291 36 4 chr17 50320728 50321007 -44951644 - MLT2D LTR ERVL -125 289 2 5 968 699 226 141 15 chr17 50321410 50321608 -44951043 + RMER15 LTR ERVL 347 569 -6 5 968 189 107 0 0 chr17 50322382 50322410 -44950241 + (TTG)n Simple_repeat Simple_repeat 2 29 0 5 968 667 257 7 14 chr17 50322436 50322578 -44950073 - RSINE1 SINE B4 -22 143 3 5 968 266 270 27 13 chr17 50322829 50322904 -44949747 + ID4 SINE ID 5 80 -3 5 968 762 69 0 0 chr17 50323050 50323151 -44949500 + (GA)n Simple_repeat Simple_repeat 2 102 0 5 968 848 87 102 0 chr17 50323161 50323288 -44949363 - B1_Mur4 SINE Alu -9 141 2 5 968 391 289 15 38 chr17 50324509 50324642 -44948009 + MER3 DNA MER1_type 69 198 -11 5 968 596 207 96 0 chr17 50324709 50324844 -44947807 + B1_Mur3 SINE Alu 1 148 -1 5 968 358 246 0 14 chr17 50324874 50324948 -44947703 - RSINE1 SINE B4 -90 75 3 5 968 382 296 9 18 chr17 50324957 50325067 -44947584 - PB1D10 SINE Alu -7 110 2 5 968 234 0 0 0 chr17 50326154 50326180 -44946471 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 968 521 325 98 115 chr17 50326326 50326622 -44946029 + B4A SINE B4 2 292 0 5 968 495 268 194 61 chr17 50326826 50327335 -44945316 + L1ME2z LINE L1 5542 6118 -326 5 968 371 253 0 50 chr17 50327525 50327625 -44945026 - PB1D10 SINE Alu -18 99 5 5 968 550 218 96 22 chr17 50327691 50327827 -44944824 + B1F2 SINE Alu 2 147 -2 5 968 183 42 0 0 chr17 50329820 50329844 -44942807 + (CCG)n Simple_repeat Simple_repeat 3 26 0 5 968 234 160 0 0 chr17 50331212 50331262 -44941389 + GA-rich Low_complexity Low_complexity 3 52 0 5 969 421 343 102 58 chr17 50333561 50333905 -44938746 - ORR1E LTR MaLR 0 359 1 5 969 198 167 0 0 chr17 50334874 50334910 -44937741 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 969 273 279 93 55 chr17 50335164 50335346 -44937305 - RMER21B LTR ERV1 -127 715 527 5 969 900 229 25 33 chr17 50335281 50335691 -44936960 - ORR1D1 LTR MaLR -8 411 5 5 969 985 229 106 100 chr17 50335743 50336083 -44936568 - MTEb LTR MaLR -36 343 2 5 969 1688 36 0 0 chr17 50336184 50336376 -44936275 + B2_Mm1t SINE B2 2 193 0 5 969 356 333 79 6 chr17 50336610 50336788 -44935863 + MLT1I LTR MaLR 212 402 -9 5 969 692 241 93 131 chr17 50337164 50337531 -44935120 - ORR1E LTR MaLR -4 355 3 5 969 250 271 74 13 chr17 50337800 50337905 -44934746 - MIRc SINE MIR -132 144 37 5 969 203 280 12 118 chr17 50337997 50338082 -44934569 + L2a LINE L2 3344 3419 -7 5 969 452 234 3 33 chr17 50338594 50338696 -44933955 + PB1D10 SINE Alu 6 107 -13 5 969 256 102 20 20 chr17 50338703 50338753 -44933898 + (TCCC)n Simple_repeat Simple_repeat 1 50 0 5 969 253 333 39 29 chr17 50340817 50340919 -44931732 + MLT1G1 LTR MaLR 82 184 -395 5 969 904 226 53 57 chr17 50341260 50341542 -44931109 + B4 SINE B4 1 281 -11 5 969 3372 237 78 84 chr17 50341616 50342743 -44929908 - RMER1C Other Other 0 1342 243 5 969 351 0 0 0 chr17 50342743 50342782 -44929869 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 969 3372 237 78 84 chr17 50342782 50343004 -44929647 - RMER1C Other Other -1100 242 2 5 969 3526 210 38 26 chr17 50343085 50343600 -44929051 + L1_Mur3 LINE L1 859 1359 -4521 5 969 1209 75 0 0 chr17 50343600 50343747 -44928904 + B1_Mus2 SINE Alu 1 147 0 5 969 3526 172 53 36 chr17 50343747 50344413 -44928238 + L1_Mur3 LINE L1 1360 2068 -3812 5 969 445 148 125 0 chr17 50345034 50345122 -44927529 - ORR1C1 LTR MaLR 0 378 280 5 969 1728 99 0 0 chr17 50345122 50345365 -44927286 - L1_Mm LINE L1 -324 5559 5317 5 969 7544 140 7 14 chr17 50345362 50346709 -44925942 + L1_Mur3 LINE L1 3970 5306 -571 5 969 505 149 21 21 chr17 50346709 50346805 -44925846 - ORR1C1 LTR MaLR -277 101 6 5 969 189 286 86 0 chr17 50346824 50346894 -44925757 + L3 LINE CR1 1009 1084 -3405 5 969 765 76 0 0 chr17 50347104 50347209 -44925442 + (TCCA)n Simple_repeat Simple_repeat 4 108 0 5 969 356 239 136 42 chr17 50347215 50347333 -44925318 - ORR1E LTR MaLR -228 131 3 5 969 391 184 7 29 chr17 50347356 50347496 -44925155 + (TA)n Simple_repeat Simple_repeat 2 138 0 5 969 278 234 140 76 chr17 50347550 50347586 -44925065 - B2_Mm1a SINE B2 -9 184 3 5 969 794 185 7 0 chr17 50347586 50347721 -44924930 - RSINE1 SINE B4 -26 139 4 5 969 441 265 169 9 chr17 50347785 50347998 -44924653 - MLT1G3 LTR MaLR -348 247 1 5 969 626 267 243 27 chr17 50348483 50348783 -44923868 - MTEa LTR MaLR -14 365 1 5 969 523 173 136 0 chr17 50348819 50348929 -44923722 + B1F SINE Alu 11 135 -14 5 969 205 188 41 20 chr17 50348929 50348978 -44923673 + GA-rich Low_complexity Low_complexity 4 53 0 5 969 589 367 27 22 chr17 50349271 50349494 -44923157 - MLT1K LTR MaLR -284 311 88 5 969 1242 204 4 0 chr17 50350361 50350586 -44922065 + URR1A DNA MER1_type 1 226 0 5 969 303 324 42 28 chr17 50350742 50350885 -44921766 - RMER12 LTR ERVK -466 856 712 5 969 1184 135 77 54 chr17 50350998 50351257 -44921394 - Lx LINE L1 -25 6629 6365 5 969 293 279 62 25 chr17 50351258 50351339 -44921312 - RLTR28B LTR ERVL -276 205 122 5 969 249 311 38 28 chr17 50351494 50351600 -44921051 + B4 SINE B4 185 291 -1 5 969 256 244 39 0 chr17 50351602 50351680 -44920971 + (TCTCTG)n Simple_repeat Simple_repeat 4 84 0 5 969 1749 240 72 20 chr17 50353859 50354314 -44918337 - RLTR28B LTR ERVL -2 479 1 5 969 572 301 0 22 chr17 50354324 50354460 -44918191 - RSINE1 SINE B4 -22 143 11 5 969 240 349 73 73 chr17 50354523 50354798 -44917853 - MT2A LTR ERVL -157 376 102 5 969 296 325 31 74 chr17 50354718 50354881 -44917770 - MTEb LTR MaLR -201 178 23 5 969 578 222 31 135 chr17 50356326 50356555 -44916096 + B3 SINE B2 1 205 -11 5 969 879 19 0 0 chr17 50357209 50357314 -44915337 + (CCTG)n Simple_repeat Simple_repeat 3 107 0 5 969 219 308 91 27 chr17 50357810 50357920 -44914731 - L2 LINE L2 -559 2860 2744 5 969 636 218 0 0 chr17 50359128 50359307 -44913344 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 969 346 256 134 0 chr17 50359311 50359393 -44913258 + B4 SINE B4 194 286 -6 5 969 261 0 0 0 chr17 50359420 50359449 -44913202 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 969 204 299 108 72 chr17 50359524 50359690 -44912961 - MIRb SINE MIR -4 264 93 5 969 307 333 123 73 chr17 50360659 50360940 -44911711 - MER119 DNA MER1_type -162 421 130 5 969 810 201 127 29 chr17 50360940 50361145 -44911506 - URR1A DNA MER1_type 0 226 2 5 969 307 333 123 73 chr17 50361145 50361245 -44911406 - MER119 DNA MER1_type -454 129 21 5 969 468 0 0 0 chr17 50361479 50361531 -44911120 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 969 227 296 58 107 chr17 50361766 50361887 -44910764 + MTE2a LTR MaLR 204 318 -61 5 969 759 222 62 118 chr17 50361945 50362251 -44910400 - B4A SINE B4 0 292 4 5 969 527 221 33 132 chr17 50362641 50362735 -44909916 + B4A SINE B4 6 81 -211 5 969 473 212 41 81 chr17 50362735 50362858 -44909793 + PB1D9 SINE Alu 2 119 -1 5 969 274 309 0 86 chr17 50362903 50363020 -44909631 + B4A SINE B4 106 212 -80 5 969 210 91 0 0 chr17 50363076 50363109 -44909542 + (GA)n Simple_repeat Simple_repeat 2 34 0 5 969 374 322 0 34 chr17 50363709 50363828 -44908823 + MIRc SINE MIR 19 133 -135 5 969 568 150 9 9 chr17 50364618 50364732 -44907919 + CT-rich Low_complexity Low_complexity 3 116 0 5 969 2037 295 124 61 chr17 50364928 50366216 -44906435 - Lx8 LINE L1 -308 7165 5797 5 969 778 260 88 30 chr17 50366218 50366515 -44906136 - Lx8 LINE L1 -161 5686 5373 5 969 285 213 79 86 chr17 50366520 50366731 -44905920 + L1_Mur1 LINE L1 5195 5385 -495 5 969 458 247 21 0 chr17 50366857 50366954 -44905697 + MTD LTR MaLR 79 177 -242 5 969 842 76 0 32 chr17 50367249 50367372 -44905279 - B2_Mm1t SINE B2 -1 192 74 5 969 970 160 0 0 chr17 50368068 50368212 -44904439 + B1_Mur4 SINE Alu 1 144 -6 5 969 366 107 0 0 chr17 50368212 50368268 -44904383 + (GAAA)n Simple_repeat Simple_repeat 1 56 0 5 969 450 0 0 0 chr17 50368501 50368551 -44904100 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 969 191 338 80 55 chr17 50369085 50369248 -44903403 + MIRc SINE MIR 87 253 -15 5 969 474 318 69 25 chr17 50369336 50369539 -44903112 + RMER5 LTR ERV1 30 241 -293 5 969 723 278 35 22 chr17 50369557 50369785 -44902866 + RMER5 LTR ERV1 304 534 0 5 969 280 334 276 52 chr17 50370674 50371027 -44901624 + MLT1L LTR MaLR 105 536 -74 5 969 230 0 33 0 chr17 50371050 50371080 -44901571 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 969 493 222 20 154 chr17 50371108 50371257 -44901394 + ID_B1 SINE B4 81 209 -15 5 969 441 0 0 0 chr17 50371258 50371307 -44901344 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 969 306 0 0 0 chr17 50371307 50371340 -44901311 + (GA)n Simple_repeat Simple_repeat 2 35 0 5 969 533 141 5 53 chr17 50371355 50371543 -44901108 + (CA)n Simple_repeat Simple_repeat 1 179 0 5 969 453 189 0 17 chr17 50371565 50371737 -44900914 + (CA)n Simple_repeat Simple_repeat 1 169 0 5 969 912 277 70 40 chr17 50371744 50372071 -44900580 + MTEb LTR MaLR 39 375 -4 6 969 28 29 0 0 chr17 50372081 50372116 -44900535 + AT_rich Low_complexity Low_complexity 1 35 0 6 969 244 248 157 17 chr17 50372299 50372414 -44900237 + L1M4 LINE L1 5681 5811 -363 6 969 27 62 0 0 chr17 50373226 50373274 -44899377 + AT_rich Low_complexity Low_complexity 1 48 0 6 969 389 266 52 77 chr17 50373541 50373696 -44898955 + MLT1A1 LTR MaLR 258 408 0 6 969 394 340 91 53 chr17 50373799 50374102 -44898549 + ORR1E LTR MaLR 1 306 -64 6 969 412 173 168 30 chr17 50374488 50374619 -44898032 + B1F2 SINE Alu 1 149 0 6 969 511 112 11 11 chr17 50374619 50374694 -44897957 + (GA)n Simple_repeat Simple_repeat 1 76 0 6 969 231 36 0 0 chr17 50374694 50374722 -44897929 + (GGAA)n Simple_repeat Simple_repeat 1 28 0 6 969 511 112 11 11 chr17 50374722 50374736 -44897915 + (GA)n Simple_repeat Simple_repeat 1 14 0 6 969 233 29 0 29 chr17 50374831 50374866 -44897785 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 6 969 408 20 0 0 chr17 50375221 50375270 -44897381 + (GA)n Simple_repeat Simple_repeat 1 49 0 6 969 522 0 0 0 chr17 50375363 50375421 -44897230 + (CAGCC)n Simple_repeat Simple_repeat 3 60 0 6 969 203 32 65 0 chr17 50376126 50376157 -44896494 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 6 969 333 0 0 0 chr17 50377013 50377050 -44895601 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 969 428 275 64 0 chr17 50377060 50377169 -44895482 - RSINE1 SINE B4 -37 128 13 6 969 850 241 58 29 chr17 50377196 50377401 -44895250 - ID_B1 SINE B4 -2 222 12 6 969 3809 179 48 91 chr17 50378288 50379167 -44893484 + RMER21B LTR ERV1 2 842 0 6 969 332 301 183 45 chr17 50383040 50383329 -44889322 + L1MEc LINE L1 35 363 -6037 6 969 333 306 44 18 chr17 50383575 50383688 -44888963 + PB1D10 SINE Alu 2 117 0 6 969 600 330 22 9 chr17 50383819 50384042 -44888609 - RMER15 LTR ERVL -13 562 337 6 969 688 226 20 14 chr17 50384501 50384649 -44888002 + B1_Mur2 SINE Alu 1 149 0 6 969 220 204 0 0 chr17 50384649 50384703 -44887948 + A-rich Low_complexity Low_complexity 1 54 0 6 969 398 232 61 46 chr17 50384938 50385069 -44887582 + L1MEc LINE L1 2138 2270 -4130 6 969 2122 191 103 31 chr17 50385091 50385578 -44887073 - RMER5 LTR ERV1 -12 522 1 6 969 306 0 0 0 chr17 50386039 50386073 -44886578 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 969 222 207 0 0 chr17 50386437 50386495 -44886156 + (TCTG)n Simple_repeat Simple_repeat 3 60 0 6 969 280 289 12 0 chr17 50386542 50386625 -44886026 + C-rich Low_complexity Low_complexity 5 88 0 6 969 1227 94 11 42 chr17 50386877 50387066 -44885585 - B2_Mm2 SINE B2 -9 186 4 6 969 543 303 55 15 chr17 50387078 50387279 -44885372 - B3 SINE B2 -1 215 7 6 969 498 271 12 61 chr17 50387348 50387513 -44885138 - RLTR14 LTR ERV1 -2 380 224 6 969 489 275 40 20 chr17 50387947 50388099 -44884552 + MER76 LTR ERVL 93 247 -444 6 969 3448 44 3 0 chr17 50388119 50388503 -44884148 - IAPEY_LTR LTR ERVK 0 385 1 6 969 22179 49 3 6 chr17 50388505 50391222 -44881429 - IAPEy-int LTR ERVK -2 7511 4804 6 969 5312 179 31 2 chr17 50391222 50392171 -44880480 - IAPEY3-int LTR ERVK -6630 1050 75 6 969 3402 37 8 0 chr17 50392198 50392577 -44880074 - IAPEY_LTR LTR ERVK -3 382 1 6 969 389 300 30 0 chr17 50392681 50392781 -44879870 - B1F1 SINE Alu -46 103 1 6 969 6500 234 51 48 chr17 50393312 50393870 -44878781 + Lx7 LINE L1 843 1376 -4504 6 969 804 193 22 0 chr17 50393870 50394005 -44878646 + B1_Mur4 SINE Alu 5 142 -8 6 969 6500 196 84 30 chr17 50394005 50394020 -44878631 + Lx7 LINE L1 1377 1433 -4447 6 969 311 0 0 25 chr17 50394020 50394060 -44878591 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 969 6500 196 84 30 chr17 50394060 50395505 -44877146 + Lx7 LINE L1 1434 2959 -2921 6 969 331 278 194 0 chr17 50395487 50395556 -44877095 + Lx7 LINE L1 3575 3646 -2234 6 969 192 40 0 0 chr17 50395556 50395581 -44877070 + (CAA)n Simple_repeat Simple_repeat 1 25 0 6 969 331 278 194 0 chr17 50395581 50395655 -44876996 + Lx7 LINE L1 3647 3745 -2135 6 969 4419 253 137 26 chr17 50395634 50395861 -44876790 + Lx7 LINE L1 3910 4155 -1988 6 969 1244 61 0 20 chr17 50395861 50396011 -44876640 + B1_Mm SINE Alu 1 147 0 6 969 4419 253 145 29 chr17 50396011 50396035 -44876616 + Lx7 LINE L1 4131 4217 -1660 6 969 438 20 0 0 chr17 50396035 50396086 -44876565 + (GA)n Simple_repeat Simple_repeat 2 52 0 6 969 5527 225 87 29 chr17 50396086 50396585 -44876066 + Lx7 LINE L1 4218 4828 -1052 6 969 402 21 0 0 chr17 50396585 50396632 -44876019 + (CAGAA)n Simple_repeat Simple_repeat 5 51 0 6 969 5527 224 70 34 chr17 50396632 50397827 -44874824 + Lx7 LINE L1 4829 6042 -1654 6 969 1311 34 0 0 chr17 50397827 50397974 -44874677 + B1_Mus1 SINE Alu 2 148 0 6 969 2823 256 50 66 chr17 50397974 50398466 -44874185 + Lx7 LINE L1 6043 6528 -1168 6 969 4241 153 108 62 chr17 50398480 50399331 -44873320 - RMER19B LTR ERVK -12 890 1 6 969 2094 255 36 6 chr17 50399347 50400005 -44872646 + Lx7 LINE L1 6535 7299 -397 6 969 339 103 103 0 chr17 50400115 50400193 -44872458 + Lx7 LINE L1 7611 7696 0 6 969 980 306 85 63 chr17 50401396 50401801 -44870850 + L1MB1 LINE L1 3080 3472 -2674 6 969 1057 218 15 0 chr17 50401801 50402007 -44870644 - B3 SINE B2 -6 210 2 6 969 980 306 85 63 chr17 50402007 50402491 -44870160 + L1MB1 LINE L1 3473 3989 -2157 6 969 346 315 126 91 chr17 50402759 50402958 -44869693 + B4A SINE B4 1 206 -86 6 969 396 0 0 0 chr17 50402996 50403040 -44869611 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 969 736 221 134 60 chr17 50403483 50403813 -44868838 + L1M2 LINE L1 4349 4708 -1435 6 969 990 176 0 0 chr17 50403813 50403961 -44868690 + B1_Mur2 SINE Alu 1 148 -1 6 969 185 132 26 0 chr17 50403966 50404004 -44868647 + GA-rich Low_complexity Low_complexity 3 41 0 6 969 1039 285 30 69 chr17 50404025 50404360 -44868291 - MTE2b LTR MaLR 0 379 58 6 969 351 256 34 34 chr17 50404360 50404449 -44868202 - MTE2b LTR MaLR -281 98 10 6 969 485 258 15 8 chr17 50404459 50404592 -44868059 + L1M2 LINE L1 4717 4850 -1290 6 969 565 254 0 29 chr17 50404740 50404878 -44867773 + RSINE1 SINE B4 32 165 0 6 969 195 100 0 0 chr17 50404878 50404908 -44867743 + (CAAT)n Simple_repeat Simple_repeat 1 30 0 6 969 997 232 85 46 chr17 50404927 50405376 -44867275 + L1MB1 LINE L1 4932 5389 -751 6 969 312 262 85 31 chr17 50405442 50405572 -44867079 - RMER15 LTR ERVL -92 483 347 6 969 289 259 131 23 chr17 50405849 50405987 -44866664 + L1MB1 LINE L1 5386 5537 -646 6 969 700 223 95 18 chr17 50406001 50406170 -44866481 + B3 SINE B2 1 182 -34 6 969 251 277 131 0 chr17 50406283 50406413 -44866238 + L1MB1 LINE L1 5814 5960 -229 6 969 942 137 0 7 chr17 50406605 50406745 -44865906 + B1_Mus1 SINE Alu 2 140 -8 6 969 274 216 87 10 chr17 50407297 50407400 -44865251 + B1F1 SINE Alu 5 115 -34 6 969 753 270 47 21 chr17 50407535 50407728 -44864923 + B3A SINE B2 1 198 0 6 969 1087 103 133 0 chr17 50408226 50408391 -44864260 + B2_Mm2 SINE B2 2 188 -7 6 969 461 135 18 26 chr17 50408478 50408592 -44864059 + GA-rich Low_complexity Low_complexity 4 116 0 6 969 288 0 0 0 chr17 50408824 50408856 -44863795 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 969 1213 188 37 6 chr17 50408866 50409117 -44863534 + RMER19A LTR ERVK 57 318 -419 6 969 568 273 66 66 chr17 50409821 50410033 -44862618 + B4 SINE B4 2 213 -79 6 969 927 210 30 10 chr17 50410636 50410838 -44861813 - B3 SINE B2 -10 206 1 6 969 7815 68 5 1 chr17 50411174 50412207 -44860444 - L1Md_F2 LINE L1 -1 6581 5543 6 969 492 233 66 48 chr17 50414738 50414905 -44857746 - RLTR14 LTR ERV1 0 382 213 6 969 623 274 77 34 chr17 50415190 50415424 -44857227 - RLTR14-int LTR ERV1 0 5317 5074 6 969 326 327 50 53 chr17 50415417 50415737 -44856914 - RLTR14-int LTR ERV1 -2088 2975 2803 6 969 307 277 36 51 chr17 50415807 50415944 -44856707 - RLTR14-int LTR ERV1 -3024 2293 2159 6 969 274 321 47 29 chr17 50416206 50416376 -44856275 - RLTR14-int LTR ERV1 -3387 1930 1758 6 969 255 331 47 31 chr17 50417367 50417495 -44855156 - RMER15 LTR ERVL -99 476 347 6 969 563 191 389 16 chr17 50418060 50418304 -44854347 + ORR1C2 LTR MaLR 15 349 -35 6 969 1240 75 0 0 chr17 50418304 50418451 -44854200 + B1_Mus1 SINE Alu 2 148 0 6 969 266 111 0 0 chr17 50418469 50418505 -44854146 + ORR1C2 LTR MaLR 330 365 -19 6 969 23 68 0 0 chr17 50420332 50420376 -44852275 + AT_rich Low_complexity Low_complexity 1 44 0 6 969 382 285 216 14 chr17 50420842 50420981 -44851670 + B3 SINE B2 21 187 -29 6 969 328 214 147 73 chr17 50421235 50421371 -44851280 - MER2 DNA MER2_type -22 323 178 6 969 607 300 46 21 chr17 50421652 50421846 -44850805 + B4A SINE B4 3 201 -91 6 969 241 356 144 0 chr17 50422042 50422174 -44850477 - B4A SINE B4 -86 206 56 6 969 276 77 0 0 chr17 50422816 50422855 -44849796 + (TATG)n Simple_repeat Simple_repeat 4 42 0 6 969 401 221 58 11 chr17 50422867 50422954 -44849697 - ID_B1 SINE B4 -5 219 129 6 969 21 36 0 0 chr17 50423510 50423538 -44849113 + AT_rich Low_complexity Low_complexity 1 28 0 6 969 1452 266 29 16 chr17 50424994 50425327 -44847324 + Lx6 LINE L1 6932 7247 -213 6 969 546 141 74 18 chr17 50425331 50425452 -44847199 + ORR1C1 LTR MaLR 290 421 0 6 969 310 163 190 3 chr17 50425452 50425572 -44847079 + Lx6 LINE L1 7362 7456 -4 6 969 23 33 0 0 chr17 50426376 50426406 -44846245 + AT_rich Low_complexity Low_complexity 1 30 0 6 969 194 262 91 15 chr17 50426631 50426697 -44845954 + L3 LINE CR1 4213 4283 -206 6 969 241 204 0 18 chr17 50428285 50428340 -44844311 - PB1 SINE Alu -25 102 49 6 969 268 130 449 0 chr17 50428767 50428836 -44843815 + ORR1C1 LTR MaLR 279 378 0 6 969 746 193 179 12 chr17 50428851 50429024 -44843627 - B3 SINE B2 -14 202 1 6 969 22 0 0 0 chr17 50429275 50429297 -44843354 + AT_rich Low_complexity Low_complexity 1 22 0 6 969 261 233 154 11 chr17 50430519 50430610 -44842041 + MER20 DNA MER1_type 34 137 -82 6 969 551 192 114 9 chr17 50431169 50431274 -44841377 - B1_Mur2 SINE Alu 0 149 34 6 969 220 315 0 52 chr17 50433562 50433639 -44839012 - L2a LINE L2 -57 3369 3297 6 969 26 0 0 0 chr17 50433911 50433937 -44838714 + AT_rich Low_complexity Low_complexity 1 26 0 6 969 271 261 129 54 chr17 50434628 50434721 -44837930 + PB1 SINE Alu 26 125 -2 6 969 227 261 13 80 chr17 50434736 50434811 -44837840 + ID4 SINE ID 4 73 -10 6 969 363 125 0 0 chr17 50434812 50434884 -44837767 + (TC)n Simple_repeat Simple_repeat 2 73 0 6 969 586 124 93 0 chr17 50434985 50435082 -44837569 - B1_Mur3 SINE Alu -1 148 43 6 969 249 273 47 75 chr17 50434989 50435096 -44837555 - B4 SINE B4 -71 221 118 6 969 1431 96 5 16 chr17 50435120 50435311 -44837340 + B2_Mm2 SINE B2 1 189 -6 6 969 744 256 54 70 chr17 50435483 50435814 -44836837 - Lx7 LINE L1 -1605 6091 5766 6 969 960 220 150 10 chr17 50435813 50436107 -44836544 - Lx7 LINE L1 -531 5349 5015 6 969 1174 69 14 0 chr17 50436205 50436350 -44836301 + B1_Mus2 SINE Alu 1 147 0 6 969 25 31 0 0 chr17 50436350 50436382 -44836269 + AT_rich Low_complexity Low_complexity 1 32 0 6 969 294 29 0 0 chr17 50436465 50436500 -44836151 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 969 3249 65 8 2 chr17 50436747 50437145 -44835506 + MTB LTR MaLR 1 400 0 7 969 966 55 68 30 chr17 50437355 50437487 -44835164 + B1_Mus1 SINE Alu 1 137 -11 7 969 191 61 30 0 chr17 50437494 50437527 -44835124 + (CAAA)n Simple_repeat Simple_repeat 4 37 0 7 969 399 270 127 21 chr17 50438167 50438356 -44834295 - RLTR42-int LTR ERVK -4139 1383 1175 7 969 381 329 53 40 chr17 50438784 50439031 -44833620 - RLTR42-int LTR ERVK -4686 836 587 7 969 1056 267 112 15 chr17 50439975 50440306 -44832345 - Lx9 LINE L1 -922 6722 6360 7 969 22 0 0 0 chr17 50440499 50440521 -44832130 + AT_rich Low_complexity Low_complexity 1 22 0 7 969 21 0 0 0 chr17 50440537 50440558 -44832093 + AT_rich Low_complexity Low_complexity 1 21 0 7 969 180 97 0 0 chr17 50440558 50440589 -44832062 + (TTTAA)n Simple_repeat Simple_repeat 4 34 0 7 969 24 0 0 0 chr17 50440590 50440614 -44832037 + AT_rich Low_complexity Low_complexity 1 24 0 7 969 324 143 0 0 chr17 50441376 50441432 -44831219 + (TG)n Simple_repeat Simple_repeat 1 56 0 7 969 468 165 116 42 chr17 50441442 50441537 -44831114 - RSINE1 SINE B4 -10 155 54 7 969 400 311 103 72 chr17 50441972 50442263 -44830388 - LTR85a LTR Gypsy? -51 651 352 7 969 802 219 57 47 chr17 50442436 50442628 -44830023 + B3A SINE B2 1 194 -4 7 969 315 113 0 0 chr17 50442984 50443037 -44829614 + (CAT)n Simple_repeat Simple_repeat 2 54 0 7 969 468 325 85 25 chr17 50443097 50443294 -44829357 - B4A SINE B4 -63 229 21 7 969 3883 165 64 40 chr17 50443294 50444142 -44828509 + RMER13B LTR ERVK 1 859 -1 7 969 199 292 226 0 chr17 50444168 50444274 -44828377 - MIR SINE MIR -102 160 31 7 969 360 248 63 19 chr17 50444625 50444798 -44827853 + MLT1A1 LTR MaLR 185 405 -3 7 969 714 270 87 39 chr17 50444798 50445166 -44827485 + MLT1A1-int LTR MaLR 1 386 -1349 7 969 244 287 11 11 chr17 50445184 50445272 -44827379 - MLT1A1 LTR MaLR -3 405 318 7 969 21 0 0 0 chr17 50446085 50446106 -44826545 + AT_rich Low_complexity Low_complexity 1 21 0 7 969 2228 136 73 8 chr17 50446292 50446662 -44825989 + ORR1B1 LTR MaLR 1 394 0 7 969 541 174 223 0 chr17 50447077 50447198 -44825453 - B1F SINE Alu -1 148 1 7 969 308 319 107 11 chr17 50447198 50447385 -44825266 - L1ME4a LINE L1 -226 5898 5694 7 969 315 104 0 0 chr17 50447430 50447478 -44825173 + (TATG)n Simple_repeat Simple_repeat 4 51 0 7 969 226 233 88 124 chr17 50447478 50447605 -44825046 + LTR48B LTR ERV1 10 132 -512 7 969 749 136 271 28 chr17 50447946 50448127 -44824524 - URR1B DNA MER1_type 0 225 1 7 969 605 178 264 0 chr17 50449364 50449527 -44823124 - B3 SINE B2 -10 206 1 7 969 206 74 55 18 chr17 50450032 50450087 -44822564 + (TTA)n Simple_repeat Simple_repeat 1 57 0 7 969 856 259 16 11 chr17 50450678 50450865 -44821786 - B3 SINE B2 -28 188 1 7 969 380 247 12 0 chr17 50451201 50451286 -44821365 + PB1D10 SINE Alu 23 108 -9 7 969 334 169 0 0 chr17 50451768 50451827 -44820824 + B1_Mur4 SINE Alu 26 84 -66 7 969 239 194 77 46 chr17 50451769 50451834 -44820817 + ID_B1 SINE B4 107 173 -51 7 969 200 236 36 0 chr17 50451939 50451994 -44820657 + CT-rich Low_complexity Low_complexity 2 58 0 7 969 557 233 26 0 chr17 50451995 50452111 -44820540 - B1F SINE Alu -21 128 10 7 969 459 290 6 76 chr17 50452002 50452135 -44820516 - ID_B1 SINE B4 -25 199 78 7 969 315 0 0 0 chr17 50452135 50452170 -44820481 + (TC)n Simple_repeat Simple_repeat 1 35 0 7 969 459 290 6 76 chr17 50452170 50452193 -44820458 - ID SINE ID -147 77 54 7 969 252 0 0 0 chr17 50452840 50452868 -44819783 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 7 969 237 148 0 0 chr17 50452876 50452937 -44819714 - Lx3_Mus LINE L1 0 7009 6949 7 969 992 47 8 0 chr17 50452943 50453072 -44819579 + B1_Mus1 SINE Alu 19 148 0 7 969 22 35 0 0 chr17 50453314 50453343 -44819308 + AT_rich Low_complexity Low_complexity 1 29 0 7 969 1379 85 11 5 chr17 50453354 50453543 -44819108 + B2_Mm2 SINE B2 1 190 -5 7 969 624 169 15 23 chr17 50453567 50453700 -44818951 + B1_Mur2 SINE Alu 17 148 -1 7 969 371 193 0 70 chr17 50453856 50453984 -44818667 - RLTR15 LTR ERVK -208 151 33 7 969 491 196 12 12 chr17 50454212 50454372 -44818279 + (CA)n Simple_repeat Simple_repeat 1 160 0 7 969 468 172 41 12 chr17 50454406 50454577 -44818074 + (CA)n Simple_repeat Simple_repeat 2 177 0 7 969 2034 145 9 77 chr17 50454588 50455028 -44817623 + RMER17C LTR ERVK 1 410 0 7 969 24 32 0 0 chr17 50455231 50455262 -44817389 + AT_rich Low_complexity Low_complexity 1 31 0 7 969 3451 193 93 20 chr17 50457729 50458596 -44814055 + Lx6 LINE L1 303 1233 -6495 7 969 3447 157 25 14 chr17 50458565 50458817 -44813834 + Lx6 LINE L1 1716 1971 -3909 7 969 243 0 0 0 chr17 50458817 50458844 -44813807 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 969 3447 157 25 14 chr17 50458844 50459224 -44813427 + Lx6 LINE L1 1972 2355 -3525 7 969 3558 161 55 42 chr17 50459232 50459996 -44812655 - L1_Mur3 LINE L1 -2693 3187 2414 7 969 8517 150 22 39 chr17 50459985 50460614 -44812037 + Lx6 LINE L1 4237 4846 -1034 7 969 2036 238 2 5 chr17 50460614 50461036 -44811615 + MTC LTR MaLR 1 421 0 7 969 8517 150 22 39 chr17 50461036 50461962 -44810689 + Lx6 LINE L1 4847 5766 -114 7 969 1064 29 0 7 chr17 50461965 50462104 -44810547 - B1_Mm SINE Alu -1 146 9 7 969 4969 200 94 18 chr17 50462119 50462189 -44810462 + Lx6 LINE L1 5758 5823 -1637 7 969 360 0 0 0 chr17 50462189 50462229 -44810422 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 7 121 4969 208 166 19 chr17 50462229 50463507 -44809144 + Lx6 LINE L1 5824 7299 -161 7 970 543 286 121 0 chr17 50465565 50465789 -44806862 - MER33 DNA MER1_type -63 261 11 7 970 495 0 0 0 chr17 50466395 50466450 -44806201 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 7 970 1200 68 0 0 chr17 50466450 50466597 -44806054 - B1_Mus2 SINE Alu 0 147 1 7 970 426 269 0 37 chr17 50466600 50466708 -44805943 - RSINE1 SINE B4 -61 104 1 7 970 918 246 188 6 chr17 50466858 50467194 -44805457 + MTD LTR MaLR 10 406 -13 7 970 418 203 313 48 chr17 50468022 50468188 -44804463 - B3 SINE B2 -6 210 1 7 970 225 0 0 0 chr17 50468587 50468612 -44804039 + (AGGTG)n Simple_repeat Simple_repeat 5 29 0 7 970 381 329 50 50 chr17 50468744 50468962 -44803689 + ORR1E LTR MaLR 5 222 -157 7 970 205 337 10 20 chr17 50469270 50469370 -44803281 + MIR SINE MIR 85 183 -79 7 970 297 183 14 87 chr17 50469447 50469551 -44803100 + PB1D9 SINE Alu 39 142 -7 7 970 285 140 0 0 chr17 50469558 50469615 -44803036 + (GA)n Simple_repeat Simple_repeat 2 58 0 7 970 234 149 0 41 chr17 50469630 50469679 -44802972 + MIRb SINE MIR 213 259 -9 7 970 201 39 0 0 chr17 50469905 50469931 -44802720 + (T)n Simple_repeat Simple_repeat 1 26 0 7 970 227 288 51 59 chr17 50470168 50470286 -44802365 + MIRb SINE MIR 118 234 -34 7 970 275 265 91 143 chr17 50470353 50470639 -44802012 - LTR16A1 LTR ERVL -7 449 179 7 970 241 154 39 0 chr17 50470698 50470750 -44801901 + A-rich Low_complexity Low_complexity 1 54 0 7 970 469 296 57 23 chr17 50471258 50471434 -44801217 + ORR1E LTR MaLR 173 354 -5 7 970 1292 254 80 38 chr17 50471471 50471921 -44800730 + ORR1E-int LTR MaLR 49 517 -853 7 970 239 270 34 34 chr17 50472055 50472174 -44800477 + Lx8 LINE L1 7350 7468 -5 7 970 24 77 0 0 chr17 50472188 50472240 -44800411 + AT_rich Low_complexity Low_complexity 1 52 0 7 970 633 257 134 20 chr17 50472265 50472622 -44800029 + BLACKJACK DNA AcHobo 2383 2780 -164 7 970 336 315 0 73 chr17 50472693 50472830 -44799821 - RSINE1 SINE B4 -38 127 1 7 970 263 321 42 21 chr17 50472830 50472959 -44799692 + BLACKJACK DNA AcHobo 2774 2905 -39 7 970 546 308 51 13 chr17 50473672 50473830 -44798821 + B3 SINE B2 15 178 -38 7 970 285 128 0 0 chr17 50473878 50473925 -44798726 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 970 693 283 92 36 chr17 50474409 50474768 -44797883 + MTEa LTR MaLR 1 379 0 7 970 240 254 15 15 chr17 50474779 50474847 -44797804 - MLT1A LTR MaLR -281 93 26 7 970 846 136 97 43 chr17 50475235 50475420 -44797231 - B2_Mm2 SINE B2 0 195 1 7 970 432 0 0 0 chr17 50475919 50475967 -44796684 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 970 471 101 0 0 chr17 50475977 50476056 -44796595 + (TTCTC)n Simple_repeat Simple_repeat 2 80 0 7 970 422 276 70 22 chr17 50476077 50476274 -44796377 + MTEa LTR MaLR 70 276 -103 7 970 235 390 95 11 chr17 50476254 50476433 -44796218 + MLT2F LTR ERVL 252 445 -218 7 970 391 324 96 11 chr17 50476467 50476654 -44795997 - MER20 DNA MER1_type -13 206 4 7 970 780 200 48 16 chr17 50477499 50477687 -44794964 + B2_Mm2 SINE B2 1 194 -1 7 970 565 291 235 34 chr17 50478169 50478269 -44794382 - L2 LINE L2 -425 2994 2891 7 970 736 250 30 50 chr17 50478269 50478471 -44794180 - B3A SINE B2 0 198 1 7 970 565 291 235 34 chr17 50478471 50479398 -44793253 - L2 LINE L2 -529 2890 1760 7 970 329 277 132 69 chr17 50479398 50479557 -44793094 + MTEb LTR MaLR 1 169 -210 7 970 183 80 0 0 chr17 50479717 50479742 -44792909 + (CAAAAA)n Simple_repeat Simple_repeat 4 28 0 7 970 346 302 85 18 chr17 50479923 50480088 -44792563 - L2 LINE L2 -1871 1548 1373 7 970 442 284 26 73 chr17 50480185 50480375 -44792276 - B3A SINE B2 -4 191 5 7 970 330 167 0 0 chr17 50480386 50480446 -44792205 + (TA)n Simple_repeat Simple_repeat 2 61 0 7 970 1325 193 141 12 chr17 50480563 50480904 -44791747 - MTD LTR MaLR -15 404 20 7 970 418 301 32 49 chr17 50482458 50482643 -44790008 - MER3 DNA MER1_type 0 209 28 7 970 185 244 0 0 chr17 50482923 50482968 -44789683 - L2a LINE L2 0 3426 3382 7 970 661 215 23 0 chr17 50483174 50483304 -44789347 - B3A SINE B2 -65 133 1 7 970 287 287 100 8 chr17 50483693 50483823 -44788828 - L2a LINE L2 -747 2672 2531 7 970 238 337 102 0 chr17 50483837 50483935 -44788716 + PB1D10 SINE Alu 3 110 -7 7 970 752 167 7 0 chr17 50483935 50484079 -44788572 + GA-rich Low_complexity Low_complexity 1 145 0 7 970 369 237 22 168 chr17 50484238 50484375 -44788276 + PB1D10 SINE Alu 1 117 0 7 970 1281 84 0 0 chr17 50484884 50485354 -44787297 + (TG)n Simple_repeat Simple_repeat 1 470 0 7 970 1374 40 0 0 chr17 50485375 50485552 -44787099 + (TG)n Simple_repeat Simple_repeat 2 178 0 7 970 284 322 123 39 chr17 50485713 50485868 -44786783 + LTR48 LTR ERV1 1 168 -476 7 970 390 318 84 30 chr17 50485945 50486208 -44786443 + LTR48 LTR ERV1 492 768 -19 7 970 328 340 133 45 chr17 50486362 50486475 -44786176 + RMER5 LTR ERV1 51 180 -354 7 970 2462 119 65 27 chr17 50486475 50486889 -44785762 + RLTR23 LTR ERV1 1 430 0 8 970 328 340 133 45 chr17 50486889 50487105 -44785546 + RMER5 LTR ERV1 181 409 -125 7 970 485 121 12 0 chr17 50487670 50487753 -44784898 + (TC)n Simple_repeat Simple_repeat 2 85 0 8 970 195 42 0 0 chr17 50487753 50487777 -44784874 + (CA)n Simple_repeat Simple_repeat 1 24 0 8 970 620 247 58 45 chr17 50487867 50488109 -44784542 + MER33 DNA MER1_type 80 324 0 8 970 1799 161 150 3 chr17 50488934 50489301 -44783350 - MTC LTR MaLR 0 421 1 8 970 1614 197 55 3 chr17 50490021 50490383 -44782268 - RMER5 LTR ERV1 -126 408 28 8 970 644 107 210 16 chr17 50490834 50490958 -44781693 - URR1B DNA MER1_type -20 205 58 8 970 636 292 126 11 chr17 50491008 50491285 -44781366 + L1M2 LINE L1 4719 5027 -1116 8 970 621 230 43 0 chr17 50491363 50491502 -44781149 + B1_Mur1 SINE Alu 5 149 0 8 970 206 191 0 41 chr17 50491568 50491617 -44781034 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 8 970 318 264 56 0 chr17 50491637 50491709 -44780942 - ID4 SINE ID -6 77 2 8 970 237 274 0 0 chr17 50491751 50491813 -44780838 + L1_Mur3 LINE L1 5370 5431 -449 8 970 418 331 13 26 chr17 50491813 50491968 -44780683 + RSINE1 SINE B4 13 165 0 8 970 527 240 16 11 chr17 50492031 50492177 -44780474 + L1M2 LINE L1 5530 5673 -639 8 970 762 150 56 0 chr17 50493274 50493432 -44779219 + B2_Mm2 SINE B2 2 199 -17 8 970 658 132 16 8 chr17 50493434 50493556 -44779095 + GA-rich Low_complexity Low_complexity 2 124 0 8 970 517 167 150 55 chr17 50493570 50493697 -44778954 + B1_Mm SINE Alu 3 141 -6 8 970 295 320 31 99 chr17 50493772 50493963 -44778688 + MER21B LTR ERV1 98 275 -588 8 970 248 367 70 50 chr17 50493839 50494040 -44778611 + MER77 LTR ERVL 158 362 -245 8 970 232 357 61 15 chr17 50494170 50494301 -44778350 + MER21B LTR ERV1 474 610 -253 8 970 336 305 38 44 chr17 50494474 50494632 -44778019 - RLTR14 LTR ERV1 -2 380 224 8 970 226 266 67 84 chr17 50495052 50495171 -44777480 + MER20 DNA MER1_type 102 218 -1 8 970 1476 295 93 32 chr17 50495335 50495469 -44777182 - Lx8 LINE L1 -1159 6314 6181 8 970 435 63 0 0 chr17 50495469 50495532 -44777119 + (TG)n Simple_repeat Simple_repeat 2 64 0 8 970 1476 271 66 21 chr17 50495532 50496132 -44776519 - Lx8 LINE L1 -1293 6180 5508 8 970 24 32 0 0 chr17 50496170 50496201 -44776450 + AT_rich Low_complexity Low_complexity 1 31 0 8 970 2162 219 103 180 chr17 50496204 50497185 -44775466 - RMER1C Other Other -1 1341 437 8 970 22 35 0 0 chr17 50497220 50497249 -44775402 + AT_rich Low_complexity Low_complexity 1 29 0 8 970 1150 279 51 26 chr17 50497249 50497328 -44775323 - Lx8 LINE L1 -427 5453 5379 8 970 905 199 27 11 chr17 50497328 50497516 -44775135 - B2_Mm2 SINE B2 0 195 5 8 970 1150 279 51 26 chr17 50497516 50497888 -44774763 - Lx8 LINE L1 -502 5378 4991 8 970 2091 292 66 3 chr17 50497886 50498536 -44774115 + Lx8 LINE L1 6338 7028 -445 8 970 518 228 252 52 chr17 50498580 50498890 -44773761 - RMER13A LTR ERVK -394 466 95 8 970 439 230 68 53 chr17 50498984 50499117 -44773534 + Lx8 LINE L1 7079 7213 -260 8 970 369 0 0 0 chr17 50499117 50499158 -44773493 + (GA)n Simple_repeat Simple_repeat 1 41 0 8 970 21 0 0 0 chr17 50499738 50499759 -44772892 + AT_rich Low_complexity Low_complexity 1 21 0 8 970 356 245 122 0 chr17 50499766 50499864 -44772787 - ID_B1 SINE B4 -3 221 112 8 970 250 266 0 15 chr17 50499874 50499939 -44772712 + MT2A LTR ERVL 3 66 -467 8 970 315 150 18 9 chr17 50499929 50500000 -44772651 + MT2A LTR ERVL 408 519 -65 8 970 1756 235 40 48 chr17 50500033 50500511 -44772140 - RMER19C LTR ERVK 0 611 138 1 970 216 0 0 0 chr17 50501142 50501166 -44771485 + (A)n Simple_repeat Simple_repeat 1 24 0 2 970 254 321 114 33 chr17 50501502 50501980 -44770671 + L2a LINE L2 2719 3235 -191 3 970 426 85 0 0 chr17 50502794 50502853 -44769798 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 970 1244 234 4 0 chr17 50503410 50503679 -44768972 + Lx2B LINE L1 6714 6983 -17 5 970 375 231 291 17 chr17 50506513 50506685 -44765966 - ID_B1 SINE B4 -4 220 2 6 970 280 137 20 0 chr17 50506919 50506970 -44765681 - MT2B LTR ERVL 0 584 533 7 970 406 202 35 12 chr17 50506988 50507158 -44765493 + (TA)n Simple_repeat Simple_repeat 2 175 0 8 970 1066 232 45 72 chr17 50507203 50507685 -44764966 - MT2B LTR ERVL -61 540 4 7 970 225 250 101 11 chr17 50507852 50507941 -44764710 + MIR SINE MIR 87 183 -79 9 970 196 276 221 13 chr17 50509882 50510040 -44762611 - L2a LINE L2 -2 3424 3234 1 970 470 202 0 0 chr17 50510710 50510794 -44761857 + B1_Mus2 SINE Alu 1 84 -63 1 970 199 244 0 22 chr17 50511258 50511304 -44761347 + MIRm SINE MIR 78 122 -154 1 970 456 285 0 0 chr17 50511408 50511587 -44761064 + (TG)n Simple_repeat Simple_repeat 1 179 0 1 970 758 219 41 6 chr17 50512192 50512362 -44760289 + Lx7 LINE L1 7160 7335 -361 1 970 189 74 0 0 chr17 50512366 50512393 -44760258 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 970 288 0 0 0 chr17 50512429 50512461 -44760190 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 970 260 237 27 60 chr17 50512632 50512816 -44759835 + (CATA)n Simple_repeat Simple_repeat 1 178 0 1 970 660 86 0 0 chr17 50512826 50512931 -44759720 + (TC)n Simple_repeat Simple_repeat 1 105 0 1 970 450 0 0 0 chr17 50512931 50512980 -44759671 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 970 572 319 42 25 chr17 50513326 50513609 -44759042 + MER21-int LTR ERV1 60 347 -3844 2 970 1235 192 67 70 chr17 50513637 50514024 -44758627 - Lx9 LINE L1 0 7644 7259 2 970 207 0 0 0 chr17 50514844 50514867 -44757784 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 970 260 293 134 43 chr17 50514982 50515146 -44757505 + MER20 DNA MER1_type 8 186 -33 2 970 729 269 120 84 chr17 50516193 50516533 -44756118 - L1MB4 LINE L1 -8 6172 5819 2 970 1716 45 5 5 chr17 50516533 50516754 -44755897 - L1Md_F2 LINE L1 -1 6581 6361 2 970 729 269 120 84 chr17 50516754 50516888 -44755763 - L1MB4 LINE L1 -362 5818 5681 2 970 540 255 54 27 chr17 50516915 50517064 -44755587 - RSINE1 SINE B4 0 165 13 2 970 285 304 76 81 chr17 50517167 50517188 -44755463 - MamRep564 Unknown Unknown -85 272 255 2 970 946 243 109 26 chr17 50517188 50517538 -44755113 + MTE2a LTR MaLR 1 379 0 2 970 285 304 76 81 chr17 50517538 50517713 -44754938 - MamRep564 Unknown Unknown -103 254 77 2 970 460 331 13 19 chr17 50518098 50518252 -44754399 + B4 SINE B4 8 160 -132 2 970 1342 210 160 74 chr17 50518253 50518715 -44753936 - RMER13A LTR ERVK -2 858 357 3 970 2622 137 28 11 chr17 50518715 50519151 -44753500 + L1_Mur2 LINE L1 4325 4767 -1110 3 970 1162 61 0 39 chr17 50519151 50519304 -44753347 + B1_Mm SINE Alu 1 147 0 3 970 221 83 0 27 chr17 50519304 50519341 -44753310 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 3 970 290 152 0 29 chr17 50519348 50519416 -44753235 + Lx LINE L1 6585 6650 -4 3 970 2245 130 33 3 chr17 50519439 50519801 -44752850 - RMER13A LTR ERVK -487 373 1 3 970 921 120 0 0 chr17 50519918 50520185 -44752466 + (CA)n Simple_repeat Simple_repeat 1 267 0 3 970 1481 70 5 0 chr17 50520428 50520627 -44752024 + L1_Mus2 LINE L1 6367 6566 0 3 970 475 294 78 58 chr17 50521087 50521352 -44751299 + MLT1G3 LTR MaLR 166 453 -126 3 970 444 258 152 57 chr17 50521718 50521928 -44750723 + L1M4 LINE L1 4903 5132 -1014 3 970 398 335 64 60 chr17 50522937 50523204 -44749447 - MLT1H2 LTR MaLR -26 463 196 3 970 20760 85 11 24 chr17 50523465 50526170 -44746481 + L1_Mus1 LINE L1 3003 5679 -204 4 970 1119 71 0 7 chr17 50526170 50526312 -44746339 - B1_Mus2 SINE Alu -5 142 2 4 970 20760 72 22 23 chr17 50526312 50527212 -44745439 + L1_Mus1 LINE L1 5664 6563 -4 4 970 629 164 66 15 chr17 50527310 50527446 -44745205 - B1_Mur1 SINE Alu 0 149 7 4 970 2120 98 13 0 chr17 50527714 50528032 -44744619 + ORR1A2 LTR MaLR 1 322 -5 4 970 232 250 19 0 chr17 50528555 50528607 -44744044 - RSINE1 SINE B4 -57 108 56 4 970 586 318 177 5 chr17 50529372 50529761 -44742890 - MLT1J LTR MaLR -8 504 49 4 970 1870 123 45 12 chr17 50532200 50532536 -44740115 - ORR1B1 LTR MaLR 0 394 48 4 970 337 343 70 0 chr17 50533610 50533753 -44738898 - RMER15 LTR ERVL -2 573 421 4 970 22 35 0 0 chr17 50534513 50534542 -44738109 + AT_rich Low_complexity Low_complexity 1 29 0 4 970 325 278 112 51 chr17 50534619 50534734 -44737917 + L1MC4 LINE L1 6995 7105 -937 4 970 294 50 0 0 chr17 50534734 50534774 -44737877 + (CAGA)n Simple_repeat Simple_repeat 2 41 0 5 970 325 278 112 51 chr17 50534774 50534954 -44737697 + L1MC4 LINE L1 7106 7307 -735 4 970 1130 247 81 35 chr17 50534973 50535205 -44737446 + MTE2b LTR MaLR 1 246 -133 5 970 1782 225 26 68 chr17 50535205 50535706 -44736945 + RLTR28B LTR ERVL 2 481 0 5 970 1130 250 84 32 chr17 50535706 50535834 -44736817 + MTE2b LTR MaLR 242 368 -2 5 970 182 150 25 0 chr17 50536177 50536217 -44736434 + GA-rich Low_complexity Low_complexity 2 42 0 5 970 322 221 5 9 chr17 50536466 50536581 -44736070 + B1F SINE Alu 7 149 0 5 970 244 289 11 43 chr17 50536843 50536937 -44735714 + L1MC LINE L1 5559 5649 -2233 5 970 206 105 47 109 chr17 50536947 50537011 -44735640 + A-rich Low_complexity Low_complexity 4 63 0 5 970 247 345 71 0 chr17 50537088 50537201 -44735450 - MLT1B LTR MaLR -6 384 264 5 970 1101 291 19 59 chr17 50537565 50537937 -44734714 + ORR1E LTR MaLR 1 357 -2 5 970 208 318 0 0 chr17 50538430 50538515 -44734136 + (CATA)n Simple_repeat Simple_repeat 1 85 0 5 970 492 18 0 0 chr17 50538526 50538583 -44734068 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 6 970 421 233 6 6 chr17 50538587 50538751 -44733900 + (TA)n Simple_repeat Simple_repeat 2 165 0 6 970 330 214 0 0 chr17 50538755 50538844 -44733807 + (CA)n Simple_repeat Simple_repeat 2 90 0 6 970 1592 251 82 5 chr17 50540074 50540463 -44732188 + MTD LTR MaLR 1 419 0 6 970 372 223 106 10 chr17 50540909 50541013 -44731638 + PB1D9 SINE Alu 6 119 -1 6 970 458 311 141 19 chr17 50541105 50541361 -44731290 - MLT1J LTR MaLR -3 509 223 6 970 180 0 0 0 chr17 50541596 50541616 -44731035 + (A)n Simple_repeat Simple_repeat 1 20 0 6 970 6385 109 17 1 chr17 50541616 50542738 -44729913 - L1_Mus4 LINE L1 -639 5997 4855 6 970 4796 102 0 8 chr17 50542738 50543402 -44729249 + L1_Mus4 LINE L1 5978 6636 0 6 970 585 42 0 0 chr17 50544088 50544160 -44728491 + (TC)n Simple_repeat Simple_repeat 1 72 0 6 970 393 282 15 61 chr17 50544165 50544237 -44728414 - Lx8 LINE L1 -154 7319 7249 6 970 2091 118 12 58 chr17 50544237 50544579 -44728072 - ORR1A3 LTR MaLR 0 326 1 7 970 393 282 15 61 chr17 50544579 50544638 -44728013 - Lx8 LINE L1 -225 7248 7194 6 970 592 322 28 16 chr17 50544624 50544873 -44727778 + Lx8 LINE L1 6886 7137 -336 6 970 3249 154 39 25 chr17 50545089 50545656 -44726995 + RMER15 LTR ERVL 1 575 0 7 970 1091 234 212 87 chr17 50545850 50546322 -44726329 - MT2A LTR ERVL -2 531 1 7 970 465 283 0 32 chr17 50547150 50547274 -44725377 + B4A SINE B4 125 244 -48 7 970 293 250 8 0 chr17 50547304 50547428 -44725223 + GA-rich Low_complexity Low_complexity 2 126 0 7 970 183 80 0 0 chr17 50547515 50547540 -44725111 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 970 644 188 0 45 chr17 50548844 50548978 -44723673 - B1_Mur1 SINE Alu -21 128 1 7 970 238 235 130 32 chr17 50548978 50549099 -44723552 - MTEa LTR MaLR -15 364 232 7 970 637 107 14 31 chr17 50549467 50549692 -44722959 + (TG)n Simple_repeat Simple_repeat 1 220 0 7 970 1086 217 0 0 chr17 50550155 50550362 -44722289 + B3 SINE B2 5 211 -5 7 970 1123 283 30 0 chr17 50550771 50551068 -44721583 - MTEb LTR MaLR 0 379 74 8 970 269 321 35 35 chr17 50551116 50551232 -44721419 - MTE-int LTR MaLR -2 1578 1463 8 970 776 45 0 9 chr17 50551285 50551396 -44721255 - B1_Mus1 SINE Alu -2 146 37 8 970 553 325 7 7 chr17 50551414 50551566 -44721085 - RSINE1 SINE B4 -13 152 1 8 970 1188 280 151 17 chr17 50551566 50552711 -44719940 - MTE-int LTR MaLR -104 1476 117 8 970 481 200 16 48 chr17 50552781 50552907 -44719744 - MTEb LTR MaLR 0 379 258 8 970 465 252 31 8 chr17 50552909 50553037 -44719614 - MTEb LTR MaLR -248 131 1 8 970 232 139 0 0 chr17 50553135 50553178 -44719473 + ORR1D2 LTR MaLR 328 370 0 8 970 924 253 79 22 chr17 50553204 50553538 -44719113 + ORR1E LTR MaLR 3 411 -8 8 970 393 311 173 32 chr17 50553577 50553826 -44718825 - B4 SINE B4 -5 287 4 8 970 233 311 57 28 chr17 50554193 50554299 -44718352 - MER20 DNA MER1_type 0 219 111 8 970 295 256 24 0 chr17 50554540 50554622 -44718029 + RMER15 LTR ERVL 422 505 -70 8 970 394 280 0 71 chr17 50554642 50554769 -44717882 - MER20 DNA MER1_type -87 132 15 8 970 240 219 27 27 chr17 50554814 50554889 -44717762 - LTR16E1 LTR ERVL -34 504 430 9 970 975 275 28 54 chr17 50554895 50555249 -44717402 - ORR1E LTR MaLR -6 353 9 9 970 372 263 153 43 chr17 50555943 50556173 -44716478 + RLTR15 LTR ERVK 1 261 -307 9 970 432 0 0 0 chr17 50556173 50556221 -44716430 + (TG)n Simple_repeat Simple_repeat 2 49 0 9 970 372 292 122 23 chr17 50556221 50556397 -44716254 + RLTR15 LTR ERVK 135 333 -26 9 970 380 229 0 23 chr17 50556438 50556537 -44716114 - RMER17C-int LTR ERVK -1059 2179 2093 9 970 636 256 55 28 chr17 50556825 50557042 -44715609 + LTRIS4 LTR ERV1 285 507 0 9 970 881 279 43 105 chr17 50557044 50557577 -44715074 + MuRRS4-int LTR ERV1 5 504 -4559 9 970 1745 209 45 68 chr17 50558115 50558549 -44714102 + MuRRS4-int LTR ERV1 374 763 -4300 9 970 5193 116 14 14 chr17 50558534 50559297 -44713354 + RMER16-int LTR ERVK 677 1439 -3967 9 970 628 142 96 17 chr17 50559289 50559404 -44713247 + MuRRS4-int LTR ERV1 750 873 -4190 9 970 868 161 68 73 chr17 50559404 50559600 -44713051 - LSU-rRNA_Hsa rRNA rRNA -1365 3670 3472 9 970 438 20 0 0 chr17 50559600 50559651 -44713000 + (CA)n Simple_repeat Simple_repeat 1 51 0 9 970 868 161 68 73 chr17 50559651 50559702 -44712949 - LSU-rRNA_Hsa rRNA rRNA -1564 3471 3424 9 970 1651 241 109 14 chr17 50559708 50560210 -44712441 + MuRRS4-int LTR ERV1 895 1444 -3619 9 970 452 18 18 0 chr17 50560219 50560276 -44712375 + (GA)n Simple_repeat Simple_repeat 1 58 0 9 970 2294 105 10 34 chr17 50560276 50560728 -44711923 + MuRRS4-int LTR ERV1 1733 2263 -2800 9 970 3062 108 100 19 chr17 50560704 50560735 -44711916 + MuRRS4-int LTR ERV1 1707 1740 -1559 1 970 312 0 20 40 chr17 50560735 50560785 -44711866 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1 970 4200 83 23 8 chr17 50560785 50561413 -44711238 + MuRRS4-int LTR ERV1 2226 3033 -2030 1 970 2987 226 15 23 chr17 50561760 50562444 -44710207 + MuRRS4-int LTR ERV1 3593 4270 -793 1 970 642 234 138 0 chr17 50562436 50562624 -44710027 + MuRRS4-int LTR ERV1 4788 5001 -62 1 970 1434 106 0 31 chr17 50562633 50562858 -44709793 + LTRIS2 LTR ERV1 4 221 -343 1 970 954 263 39 54 chr17 50562868 50563202 -44709449 + MuRRS4-int LTR ERV1 4704 5032 -31 1 970 588 293 35 10 chr17 50563447 50563647 -44709004 + LTRIS4 LTR ERV1 285 489 -18 1 970 1845 238 65 63 chr17 50563666 50564343 -44708308 - RLTR19-int LTR ERVK -3033 3104 2427 1 970 258 192 0 0 chr17 50564725 50564777 -44707874 + T-rich Low_complexity Low_complexity 2 53 0 1 970 403 76 51 0 chr17 50566457 50566536 -44706115 + (CAGA)n Simple_repeat Simple_repeat 2 84 0 1 970 1478 204 69 71 chr17 50569279 50569686 -44702965 + MTD LTR MaLR 1 406 -13 1 970 405 0 0 0 chr17 50569880 50569925 -44702726 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 970 369 0 0 0 chr17 50569925 50569965 -44702686 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 970 486 239 190 25 chr17 50569966 50570129 -44702522 - ID_B1 SINE B4 -31 193 4 1 970 772 270 8 37 chr17 50570130 50570372 -44702279 - L1MC1 LINE L1 -13 6320 6086 1 970 240 238 0 0 chr17 50570416 50570479 -44702172 + (TATG)n Simple_repeat Simple_repeat 2 64 0 1 970 266 219 27 14 chr17 50570579 50570653 -44701998 - L1MC1 LINE L1 -624 5709 5635 1 970 345 318 0 9 chr17 50570946 50571054 -44701597 - Tigger5 DNA MER2_type -2195 211 105 1 970 4125 161 114 22 chr17 50571605 50572436 -44700215 + RMER13B LTR ERVK 1 908 0 1 970 643 135 35 12 chr17 50572492 50572664 -44699987 + (CA)n Simple_repeat Simple_repeat 2 177 0 1 970 488 111 0 12 chr17 50573606 50573688 -44698963 + (TG)n Simple_repeat Simple_repeat 2 82 0 1 970 941 224 100 19 chr17 50573696 50573956 -44698695 - B4 SINE B4 -11 281 1 1 970 285 288 4 1 chr17 50574019 50574102 -44698549 - PB1D10 SINE Alu -35 85 1 1 970 681 266 231 18 chr17 50575279 50575677 -44696974 + L1MC3 LINE L1 7266 7748 -37 1 970 1348 206 230 3 chr17 50575693 50576023 -44696628 - MTD LTR MaLR -14 405 1 1 970 840 128 0 0 chr17 50576046 50576179 -44696472 + (GAA)n Simple_repeat Simple_repeat 3 135 0 1 970 249 211 0 0 chr17 50576193 50576250 -44696401 + GA-rich Low_complexity Low_complexity 2 58 0 1 970 256 296 20 54 chr17 50576748 50576866 -44695785 + ID_B1 SINE B4 54 172 -52 1 970 395 250 9 69 chr17 50576781 50576897 -44695754 + PB1D10 SINE Alu 7 115 -2 1 970 486 0 0 0 chr17 50579623 50579677 -44692974 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 970 279 0 0 0 chr17 50579904 50579935 -44692716 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 1 970 415 228 38 102 chr17 50580027 50580213 -44692438 - L1MA10 LINE L1 0 6334 6161 1 970 301 278 22 73 chr17 50580287 50580343 -44692308 - L1MB1 LINE L1 -8 6181 6128 1 970 2166 117 3 61 chr17 50580343 50580689 -44691962 + ORR1A3 LTR MaLR 1 326 0 1 970 301 278 22 73 chr17 50580689 50580768 -44691883 - L1MB1 LINE L1 -62 6127 6053 1 970 204 358 21 55 chr17 50582034 50582179 -44690472 + MER5B DNA MER1_type 21 160 -18 1 970 265 371 22 58 chr17 50582188 50582411 -44690240 - MIR SINE MIR -41 221 7 1 970 197 333 49 42 chr17 50582814 50582958 -44689693 + MIR3 SINE MIR 12 156 -52 1 970 380 351 55 29 chr17 50582977 50583250 -44689401 + MER102b DNA MER1_type 32 311 -30 1 970 204 42 0 113 chr17 50583740 50583793 -44688858 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 1 970 768 288 20 47 chr17 50584116 50584415 -44688236 - B4A SINE B4 0 292 2 1 970 1337 170 9 5 chr17 50584668 50584892 -44687759 + URR1B DNA MER1_type 1 225 0 1 970 1007 273 24 17 chr17 50586406 50586700 -44685951 + L1_Rod LINE L1 5413 5708 -139 1 970 321 159 0 0 chr17 50586709 50586772 -44685879 + (TG)n Simple_repeat Simple_repeat 1 63 0 1 970 39 38 0 0 chr17 50587218 50587271 -44685380 + AT_rich Low_complexity Low_complexity 1 53 0 1 970 961 289 75 28 chr17 50587660 50588223 -44684428 + L1MB8 LINE L1 4134 4722 -1424 1 970 490 291 16 0 chr17 50588507 50588634 -44684017 + Tigger5 DNA MER2_type 1 129 -2277 1 970 788 304 144 17 chr17 50588851 50589539 -44683112 + L1MB8 LINE L1 5404 6178 0 1 970 519 17 0 0 chr17 50590259 50590319 -44682332 + (GGAGA)n Simple_repeat Simple_repeat 5 64 0 1 970 221 216 0 0 chr17 50590319 50590356 -44682295 + G-rich Low_complexity Low_complexity 1 37 0 1 970 242 89 44 0 chr17 50590356 50590401 -44682250 + (GAAAA)n Simple_repeat Simple_repeat 4 50 0 1 970 219 69 0 0 chr17 50591898 50591927 -44680724 + (TTGGGG)n Simple_repeat Simple_repeat 4 32 0 1 970 264 295 24 111 chr17 50592340 50592466 -44680185 + PB1D10 SINE Alu 3 117 0 1 121 346 301 48 10 chr17 50593735 50593839 -44678812 + PB1D10 SINE Alu 2 109 -8 1 971 216 163 0 0 chr17 50593841 50593884 -44678767 + (CAA)n Simple_repeat Simple_repeat 2 44 0 1 971 204 97 0 0 chr17 50593917 50593948 -44678703 + (A)n Simple_repeat Simple_repeat 1 31 0 1 971 375 41 0 0 chr17 50594328 50594377 -44678274 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 971 306 73 0 0 chr17 50595492 50595533 -44677118 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 971 838 238 73 97 chr17 50596291 50596663 -44675988 - MTEa LTR MaLR -16 363 1 1 971 266 0 0 29 chr17 50597369 50597404 -44675247 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 971 267 265 17 25 chr17 50599071 50599191 -44673460 + CT-rich Low_complexity Low_complexity 2 120 0 1 971 289 218 161 0 chr17 50599311 50599398 -44673253 - RMER5 LTR ERV1 0 534 434 1 971 835 196 68 29 chr17 50599735 50599940 -44672711 - B3 SINE B2 -3 213 1 1 971 26 30 0 0 chr17 50600482 50600515 -44672136 + AT_rich Low_complexity Low_complexity 1 33 0 1 971 417 204 14 7 chr17 50601143 50601281 -44671370 + CT-rich Low_complexity Low_complexity 2 140 0 1 971 1395 219 81 83 chr17 50601721 50602229 -44670422 - RMER5 LTR ERV1 0 534 28 1 971 288 70 0 0 chr17 50602270 50602313 -44670338 + (T)n Simple_repeat Simple_repeat 1 43 0 1 971 251 276 76 61 chr17 50602466 50602597 -44670054 + MIR SINE MIR 46 178 -84 1 971 314 239 83 33 chr17 50602901 50603022 -44669629 + RMER15 LTR ERVL 348 474 -101 1 971 526 191 86 9 chr17 50603319 50603435 -44669216 + B3 SINE B2 85 209 -7 1 971 3220 103 9 0 chr17 50603562 50604020 -44668631 + L1_Mus3 LINE L1 6177 6638 0 1 971 709 80 18 9 chr17 50604080 50604194 -44668457 + (GAAA)n Simple_repeat Simple_repeat 2 116 0 1 971 1223 207 21 18 chr17 50605334 50605619 -44667032 + MTD LTR MaLR 3 288 -131 1 971 434 279 83 18 chr17 50605603 50605771 -44666880 - MTD LTR MaLR -231 188 10 1 971 779 254 22 99 chr17 50606630 50607050 -44665601 - ORR1D1 LTR MaLR -13 381 7 1 971 436 288 0 33 chr17 50607583 50607705 -44664946 - LTR16A LTR ERVL -333 118 1 1 971 204 40 0 0 chr17 50607811 50607836 -44664815 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 1 971 2006 138 0 0 chr17 50607862 50608180 -44664471 + ORR1A3 LTR MaLR 1 318 -8 1 971 430 214 31 0 chr17 50608153 50608274 -44664377 - B1_Mus1 SINE Alu -3 146 15 1 971 198 0 0 0 chr17 50609021 50609043 -44663608 + (A)n Simple_repeat Simple_repeat 1 22 0 1 971 273 119 0 0 chr17 50609115 50609157 -44663494 + (CTTA)n Simple_repeat Simple_repeat 1 42 0 1 971 867 20 0 0 chr17 50610486 50610587 -44662064 + (GGA)n Simple_repeat Simple_repeat 3 103 0 1 971 281 333 14 68 chr17 50610910 50611058 -44661593 + Charlie9 DNA MER1_type 2 141 -2616 1 971 378 0 0 0 chr17 50611224 50611266 -44661385 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 971 872 280 5 0 chr17 50611299 50611513 -44661138 + B3 SINE B2 2 216 0 1 971 180 0 0 0 chr17 50611935 50611955 -44660696 + (CAGG)n Simple_repeat Simple_repeat 3 22 0 1 971 345 254 52 30 chr17 50612288 50612422 -44660229 - MER5A1 DNA MER1_type -5 161 25 1 971 503 206 0 6 chr17 50612883 50613054 -44659597 + GA-rich Low_complexity Low_complexity 2 171 0 1 971 564 89 0 0 chr17 50613054 50613133 -44659518 + (CA)n Simple_repeat Simple_repeat 2 80 0 1 971 261 0 0 0 chr17 50613133 50613161 -44659490 + (GA)n Simple_repeat Simple_repeat 2 30 0 1 971 468 280 84 0 chr17 50613439 50613582 -44659069 - L1ME2 LINE L1 -163 6001 5847 1 971 216 0 0 0 chr17 50613582 50613606 -44659045 + (ATGTG)n Simple_repeat Simple_repeat 1 24 0 1 971 594 0 0 0 chr17 50613617 50613683 -44658968 + (GA)n Simple_repeat Simple_repeat 1 66 0 1 971 946 297 77 15 chr17 50613825 50614306 -44658345 - L1ME2 LINE L1 -335 5829 5319 1 971 395 236 0 11 chr17 50614444 50614534 -44658117 - ID_B1 SINE B4 -21 203 115 1 971 212 128 21 21 chr17 50614560 50614608 -44658043 + (TTA)n Simple_repeat Simple_repeat 2 49 0 1 971 717 173 27 67 chr17 50614612 50614761 -44657890 - B1_Mur4 SINE Alu -7 143 1 1 971 488 291 82 33 chr17 50614780 50615111 -44657540 - L1M4 LINE L1 -950 5196 4850 1 971 276 30 0 0 chr17 50615113 50615146 -44657505 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 971 265 276 11 0 chr17 50615175 50615262 -44657389 + (TA)n Simple_repeat Simple_repeat 2 89 0 1 971 661 171 8 0 chr17 50615287 50615410 -44657241 - RSINE1 SINE B4 -37 128 5 1 971 303 49 0 0 chr17 50615438 50615479 -44657172 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 971 704 293 23 0 chr17 50616999 50617173 -44655478 - B3A SINE B2 -20 178 1 1 971 212 0 36 0 chr17 50618115 50618143 -44654508 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 971 1190 257 116 5 chr17 50618318 50618768 -44653883 - L1MB7 LINE L1 0 6184 5666 1 971 360 0 0 0 chr17 50618768 50618808 -44653843 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 971 1033 273 225 18 chr17 50618808 50619253 -44653398 - L1MB7 LINE L1 -514 5665 5139 1 971 225 0 0 0 chr17 50619303 50619328 -44653323 + (A)n Simple_repeat Simple_repeat 1 25 0 2 971 241 220 0 0 chr17 50619330 50619380 -44653271 - MTE2a LTR MaLR -38 341 292 2 971 357 250 176 59 chr17 50619408 50619595 -44653056 + MLT2C1 LTR ERVL 12 220 -177 2 971 237 362 147 18 chr17 50620358 50620521 -44652130 + Tigger5 DNA MER2_type 61 244 -2162 2 971 2497 160 25 2 chr17 50620540 50620979 -44651672 + RMER4A LTR ERVK 18 466 0 2 971 2917 130 13 11 chr17 50621422 50621882 -44650769 - Lx LINE L1 -1 6653 6193 2 971 234 271 34 34 chr17 50622565 50622653 -44649998 + L1MC LINE L1 4069 4156 -1990 2 971 650 292 12 12 chr17 50622657 50622827 -44649824 + B3A SINE B2 1 170 -28 2 971 906 189 0 0 chr17 50623644 50623824 -44648827 + (TA)n Simple_repeat Simple_repeat 1 180 0 2 971 309 77 0 0 chr17 50623824 50623863 -44648788 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 971 267 152 0 0 chr17 50623863 50623909 -44648742 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 2 971 445 329 23 64 chr17 50625270 50625442 -44647209 - RSINE1 SINE B4 0 165 1 2 971 210 185 37 0 chr17 50625831 50625885 -44646766 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 971 443 264 16 94 chr17 50625885 50626077 -44646574 - B3A SINE B2 -13 185 9 2 971 689 309 42 25 chr17 50626072 50626311 -44646340 - B4A SINE B4 -49 243 1 2 971 652 339 128 15 chr17 50626513 50626903 -44645748 + LTR16A LTR ERVL 12 445 -6 2 971 1485 235 33 20 chr17 50627716 50628111 -44644540 - RLTR11A2 LTR ERVK -1 526 127 2 971 421 290 10 21 chr17 50628114 50628256 -44644395 + MIR SINE MIR 88 243 -25 2 971 384 218 0 0 chr17 50628378 50628456 -44644195 + PB1D10 SINE Alu 40 117 0 2 971 465 253 0 0 chr17 50629039 50629185 -44643466 + (TG)n Simple_repeat Simple_repeat 1 146 0 2 971 281 301 122 11 chr17 50630477 50630665 -44641986 - MER3 DNA MER1_type 0 209 1 2 971 298 272 87 55 chr17 50630820 50631003 -44641648 - MER105 DNA DNA -13 191 3 2 971 384 297 108 0 chr17 50631762 50631984 -44640667 + MER33 DNA MER1_type 51 296 -28 2 971 442 255 48 10 chr17 50632117 50632220 -44640431 + PB1D9 SINE Alu 9 115 -5 2 971 548 77 11 0 chr17 50632722 50632813 -44639838 + (TC)n Simple_repeat Simple_repeat 1 92 0 2 971 619 224 0 0 chr17 50632848 50632964 -44639687 - PB1D7 SINE Alu -1 119 4 2 971 1036 167 21 11 chr17 50633079 50633267 -44639384 - B2_Mm2 SINE B2 -3 192 3 2 971 22 35 0 0 chr17 50633269 50633298 -44639353 + AT_rich Low_complexity Low_complexity 1 29 0 2 971 193 143 29 0 chr17 50635784 50635819 -44636832 + MIR SINE MIR 114 149 -113 2 971 2141 181 25 22 chr17 50636534 50636940 -44635711 - Lx5 LINE L1 0 7050 6644 2 971 25 51 0 0 chr17 50637327 50637366 -44635285 + AT_rich Low_complexity Low_complexity 1 39 0 2 971 432 0 0 0 chr17 50637368 50637416 -44635235 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 971 251 311 47 9 chr17 50638550 50638657 -44633994 - L3b LINE CR1 -68 414 304 2 971 450 0 0 0 chr17 50640961 50641011 -44631640 + (GA)n Simple_repeat Simple_repeat 2 51 0 2 971 3087 232 59 52 chr17 50641351 50641543 -44631108 - RCHARR1 DNA MER1_type 0 974 794 2 971 1158 82 7 0 chr17 50641543 50641690 -44630961 + B1_Mus1 SINE Alu 1 148 0 2 971 3087 232 59 52 chr17 50641690 50641705 -44630946 - RCHARR1 DNA MER1_type -181 793 785 2 971 2098 156 6 0 chr17 50641705 50642032 -44630619 - ORR1A4 LTR MaLR 0 329 1 2 971 3087 232 59 52 chr17 50642032 50642788 -44629863 - RCHARR1 DNA MER1_type -190 784 3 2 971 1372 272 52 8 chr17 50643661 50644061 -44628590 + MTD LTR MaLR 1 418 -1 2 971 480 233 74 15 chr17 50644347 50644482 -44628169 + B1F SINE Alu 6 148 -1 2 971 264 208 27 27 chr17 50644569 50644643 -44628008 + Charlie8 DNA MER1_type 121 194 -2234 2 971 25 75 0 0 chr17 50648513 50648566 -44624085 + GC_rich Low_complexity Low_complexity 1 53 0 2 971 297 128 0 0 chr17 50648765 50648812 -44623839 + (A)n Simple_repeat Simple_repeat 1 47 0 2 971 251 190 25 25 chr17 50648812 50648893 -44623758 + (CGG)n Simple_repeat Simple_repeat 3 83 0 2 971 229 230 78 47 chr17 50651081 50651145 -44621506 + L2b LINE L2 3291 3356 -19 2 971 289 339 8 43 chr17 50655239 50655356 -44617295 + MER94 DNA AcHobo 3 115 -19 2 971 267 227 0 0 chr17 50655681 50655747 -44616904 + (TA)n Simple_repeat Simple_repeat 2 67 0 2 971 225 0 0 0 chr17 50656543 50656568 -44616083 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2 971 1204 68 0 0 chr17 50656630 50656776 -44615875 - B1_Mus2 SINE Alu 0 147 2 2 971 23 33 0 0 chr17 50657828 50657858 -44614793 + AT_rich Low_complexity Low_complexity 1 30 0 2 971 398 292 125 31 chr17 50658100 50658492 -44614159 - L1M5 LINE L1 -744 5402 4974 2 971 233 358 24 8 chr17 50658604 50658728 -44613923 - L1M5 LINE L1 -1198 4948 4823 2 971 381 226 10 19 chr17 50659359 50659463 -44613188 - L1_Mur3 LINE L1 -1884 3996 3894 2 971 1815 150 111 0 chr17 50659464 50659797 -44612854 - ORR1C1 LTR MaLR -8 370 1 2 971 4921 259 73 25 chr17 50659805 50659852 -44612799 - L1_Mur3 LINE L1 -2021 3859 3813 2 971 423 0 0 0 chr17 50659852 50659899 -44612752 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 971 4921 259 73 25 chr17 50659899 50661196 -44611455 - L1_Mur3 LINE L1 -2068 3812 2456 2 971 411 21 0 0 chr17 50661196 50661244 -44611407 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 971 4921 259 73 25 chr17 50661244 50661809 -44610842 - L1_Mur3 LINE L1 -3425 2455 1857 2 971 333 155 0 0 chr17 50661825 50661883 -44610768 + (CAA)n Simple_repeat Simple_repeat 3 60 0 2 971 862 285 53 23 chr17 50662409 50662675 -44609976 - B4A SINE B4 -18 274 1 2 971 226 220 165 0 chr17 50662798 50662889 -44609762 + ORR1E LTR MaLR 6 111 -248 2 971 1486 180 94 77 chr17 50663683 50663743 -44608908 - MTD LTR MaLR -8 411 370 2 971 1198 47 0 13 chr17 50663743 50663893 -44608758 - B1_Mus1 SINE Alu 0 148 1 2 971 1486 180 94 77 chr17 50663893 50664236 -44608415 - MTD LTR MaLR -50 369 1 2 971 603 326 129 77 chr17 50664425 50665554 -44607097 + Charlie24 DNA MER1_type 635 1822 -628 2 971 1660 31 0 15 chr17 50665942 50666138 -44606513 + B2_Mm1a SINE B2 1 193 0 2 971 391 273 40 34 chr17 50666606 50666754 -44605897 - ORSL DNA Tip100 -126 149 1 2 971 894 273 64 48 chr17 50667805 50668178 -44604473 + MTEa LTR MaLR 1 379 0 2 971 299 231 0 15 chr17 50668252 50668318 -44604333 + ID4 SINE ID 1 65 -18 2 971 971 99 0 8 chr17 50668329 50668582 -44604069 + (CA)n Simple_repeat Simple_repeat 1 250 0 2 971 1032 116 0 5 chr17 50668607 50669384 -44603267 + (CA)n Simple_repeat Simple_repeat 1 772 0 2 971 183 203 0 0 chr17 50670113 50670172 -44602479 + (TCTG)n Simple_repeat Simple_repeat 2 60 0 2 971 22 0 0 0 chr17 50670484 50670506 -44602145 + AT_rich Low_complexity Low_complexity 1 22 0 2 971 1543 255 60 51 chr17 50670568 50671055 -44601596 - Lx6 LINE L1 -10 7450 6960 2 971 3893 212 48 93 chr17 50671036 50671559 -44601092 - Lx7 LINE L1 -964 6732 6195 2 971 672 13 0 0 chr17 50671559 50671636 -44601015 + (TTCC)n Simple_repeat Simple_repeat 2 78 0 2 971 10497 211 53 93 chr17 50671636 50672035 -44600616 - Lx7 LINE L1 -1502 6194 5873 2 971 2186 130 3 0 chr17 50672035 50672358 -44600293 - ORR1A2 LTR MaLR -3 324 1 2 971 10497 163 50 71 chr17 50672358 50675162 -44597489 - Lx7 LINE L1 -8 5872 3128 2 971 25 0 0 0 chr17 50675725 50675750 -44596901 + AT_rich Low_complexity Low_complexity 1 25 0 2 971 823 261 117 84 chr17 50675982 50676306 -44596345 + MTD LTR MaLR 58 379 0 2 971 239 54 16 82 chr17 50676430 50676491 -44596160 + T-rich Low_complexity Low_complexity 3 59 0 2 971 864 276 15 5 chr17 50677117 50677317 -44595334 + ID_B1 SINE B4 1 202 -22 2 971 4671 83 15 4 chr17 50677797 50678478 -44594173 + L1_Mm LINE L1 4466 5153 -730 2 971 1751 73 0 8 chr17 50678478 50678712 -44593939 + L1_Mus1 LINE L1 6336 6567 0 2 971 428 226 240 0 chr17 50678927 50679073 -44593578 + B3A SINE B2 1 181 -17 2 971 189 0 0 0 chr17 50679104 50679125 -44593526 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 2 971 1066 74 0 0 chr17 50679125 50679260 -44593391 - B1_Mus1 SINE Alu -12 136 2 2 971 1284 98 0 16 chr17 50679319 50679505 -44593146 - B2_Mm2 SINE B2 -11 184 2 2 971 263 311 13 26 chr17 50679644 50679720 -44592931 + B3 SINE B2 8 82 -134 2 971 612 101 0 0 chr17 50679792 50679881 -44592770 + (GAAA)n Simple_repeat Simple_repeat 4 92 0 2 971 384 248 28 83 chr17 50681354 50681499 -44591152 - RLTR23 LTR ERV1 0 430 294 2 971 1643 230 29 8 chr17 50681518 50681904 -44590747 + RLTR22_Mur LTR ERVK 416 809 -1039 2 971 472 231 48 18 chr17 50681934 50682096 -44590555 + RLTR22_Mur LTR ERVK 1492 1714 -134 2 971 453 314 70 6 chr17 50682621 50682778 -44589873 - MLT1G LTR MaLR -2 589 423 2 971 279 317 101 24 chr17 50682829 50682968 -44589683 - MLT1G LTR MaLR -252 343 189 2 971 342 67 0 0 chr17 50682968 50683013 -44589638 + (TTA)n Simple_repeat Simple_repeat 1 45 0 2 971 381 242 76 32 chr17 50683013 50683148 -44589503 - MLT1G LTR MaLR -407 188 17 2 971 1352 113 0 5 chr17 50683668 50683864 -44588787 + B2_Mm2 SINE B2 1 195 0 2 971 335 175 48 0 chr17 50684226 50684289 -44588362 + MIR3 SINE MIR 89 154 -54 2 971 1098 242 78 16 chr17 50684725 50685099 -44587552 - Lx7 LINE L1 -508 7188 6792 2 971 383 301 105 8 chr17 50685433 50685671 -44586980 - L1M5 LINE L1 -2860 3286 3026 2 971 1337 113 0 5 chr17 50685848 50686043 -44586608 - B2_Mm2 SINE B2 0 195 2 2 971 2429 97 0 6 chr17 50686413 50686757 -44585894 - L1_Mus4 LINE L1 -14 6622 6281 2 971 482 269 19 90 chr17 50687128 50687283 -44585368 - ID_B1 SINE B4 -1 223 80 2 971 1973 100 7 4 chr17 50687290 50687570 -44585081 - MTB LTR MaLR 0 400 120 2 971 1732 233 75 51 chr17 50687639 50688406 -44584245 + Lx9 LINE L1 5261 6044 -1600 2 971 249 33 0 0 chr17 50688493 50688523 -44584128 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 971 621 27 0 0 chr17 50688523 50688597 -44584054 + (GA)n Simple_repeat Simple_repeat 2 76 0 2 971 6729 113 5 8 chr17 50688597 50689936 -44582715 + Lx LINE L1 5317 6654 0 2 971 2547 298 49 26 chr17 50689972 50691070 -44581581 + Lx9 LINE L1 6334 7456 -188 2 971 387 41 0 0 chr17 50691071 50691120 -44581531 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 971 264 248 0 0 chr17 50691126 50691160 -44581491 + polypurine Low_complexity Low_complexity 2 35 0 3 971 213 108 0 0 chr17 50691160 50691197 -44581454 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 971 264 248 0 0 chr17 50691197 50691319 -44581332 + GA-rich Low_complexity Low_complexity 36 157 0 3 971 1153 80 27 43 chr17 50691620 50691804 -44580847 - Lx4A LINE L1 -461 6597 6417 3 971 297 263 116 25 chr17 50693484 50693726 -44578925 - L1M4 LINE L1 -5026 1516 1253 3 971 328 343 9 53 chr17 50693730 50693820 -44578831 - B1F SINE Alu -40 109 19 3 971 1748 141 228 37 chr17 50693820 50694224 -44578427 - RLTR28B LTR ERVL 0 481 1 3 971 328 343 9 53 chr17 50694224 50694247 -44578404 - B1F SINE Alu -131 18 1 3 971 432 0 0 0 chr17 50694351 50694399 -44578252 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 971 321 305 28 90 chr17 50694600 50694744 -44577907 - L1M4 LINE L1 -5772 770 636 3 971 989 266 162 14 chr17 50695162 50695650 -44577001 - L1MB7 LINE L1 -19 6165 5606 3 971 524 298 51 45 chr17 50695707 50696059 -44576592 - Lx9 LINE L1 -32 7612 7259 3 971 493 263 48 62 chr17 50696063 50696290 -44576361 - Lx9 LINE L1 -492 7152 6837 3 971 778 263 47 0 chr17 50697011 50697201 -44575450 - B3 SINE B2 -16 200 2 3 971 180 317 18 71 chr17 50698258 50698370 -44574281 - L2 LINE L2 -1345 2074 1969 3 971 762 232 54 44 chr17 50698844 50699047 -44573604 + ID_B1 SINE B4 20 224 0 3 971 486 0 0 0 chr17 50699577 50699631 -44573020 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 971 410 0 20 0 chr17 50699631 50699680 -44572971 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 971 1945 201 31 10 chr17 50702332 50702715 -44569936 + MTD LTR MaLR 27 417 -2 3 971 909 44 0 0 chr17 50703187 50703301 -44569350 + (GAA)n Simple_repeat Simple_repeat 3 116 0 3 971 360 0 0 0 chr17 50703301 50703341 -44569310 + (GA)n Simple_repeat Simple_repeat 1 40 0 3 971 328 314 102 28 chr17 50703445 50703622 -44569029 - L1M5 LINE L1 -370 5754 5565 3 971 458 186 12 30 chr17 50703873 50703990 -44568661 + MTD LTR MaLR 158 274 -147 3 971 363 23 0 0 chr17 50704160 50704204 -44568447 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 3 971 748 224 54 10 chr17 50704275 50704478 -44568173 - B3 SINE B2 -2 214 3 3 971 242 414 41 0 chr17 50705631 50705776 -44566875 - MER20 DNA MER1_type -62 157 7 3 971 1067 203 29 5 chr17 50705836 50706044 -44566607 + B3 SINE B2 4 216 0 3 971 25 0 0 0 chr17 50706197 50706222 -44566429 + AT_rich Low_complexity Low_complexity 1 25 0 3 971 6824 88 33 13 chr17 50706223 50707461 -44565190 - L1_Mus3 LINE L1 -7 6631 5377 3 971 378 165 96 104 chr17 50707468 50707583 -44565068 - PB1D9 SINE Alu 0 120 7 3 971 37 23 0 0 chr17 50707683 50707727 -44564924 + AT_rich Low_complexity Low_complexity 1 44 0 3 971 636 14 0 0 chr17 50707779 50707852 -44564799 + (TTCTC)n Simple_repeat Simple_repeat 5 77 0 3 971 654 171 108 0 chr17 50707857 50707968 -44564683 - B1_Mus2 SINE Alu -8 139 17 3 971 259 299 22 22 chr17 50707897 50707986 -44564665 - RLTR25A LTR ERVK -530 573 485 3 971 306 0 0 0 chr17 50708891 50708925 -44563726 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 3 971 297 51 0 0 chr17 50709171 50709210 -44563441 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 971 233 220 43 32 chr17 50709373 50709467 -44563184 + MTD-int LTR MaLR 1046 1140 -118 3 971 1532 27 49 0 chr17 50709493 50709676 -44562975 - B2_Mm1t SINE B2 0 193 2 3 971 238 175 35 0 chr17 50709709 50709766 -44562885 - CENSAT_MC Satellite centr -1 59 1 3 971 343 233 0 0 chr17 50709972 50710045 -44562606 + MTD-int LTR MaLR 1186 1258 0 3 971 1687 203 29 58 chr17 50710065 50710145 -44562506 + MTD LTR MaLR 1 77 -342 3 971 946 204 17 43 chr17 50710145 50710376 -44562275 + URR1B DNA MER1_type 1 225 0 3 971 1687 203 29 58 chr17 50710376 50710677 -44561974 + MTD LTR MaLR 78 371 -48 3 971 402 21 0 0 chr17 50710677 50710724 -44561927 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 971 762 284 9 33 chr17 50711076 50711287 -44561364 + B3 SINE B2 2 207 -9 3 971 3829 80 4 2 chr17 50711537 50712052 -44560599 - L1_Mus4 LINE L1 -1 6635 6120 3 971 424 257 142 27 chr17 50712638 50712786 -44559865 - RSINE1 SINE B4 0 165 1 3 971 234 0 0 0 chr17 50712924 50712950 -44559701 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 971 554 285 24 19 chr17 50713000 50713211 -44559440 - Lx7 LINE L1 -1347 6349 6138 3 971 1692 264 126 13 chr17 50713214 50714077 -44558574 + Lx7 LINE L1 5017 6007 -1689 3 971 275 134 0 29 chr17 50715128 50715197 -44557454 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 3 971 1076 111 0 0 chr17 50715205 50715349 -44557302 - B1_Mur4 SINE Alu -5 145 2 3 971 718 303 63 44 chr17 50718341 50718593 -44554058 - B4A SINE B4 -30 262 6 3 971 1621 242 62 32 chr17 50718871 50719277 -44553374 + MTD LTR MaLR 2 419 0 3 971 352 261 83 8 chr17 50719287 50719407 -44553244 + MTD-int LTR MaLR 11 139 -1119 3 971 496 246 42 63 chr17 50719420 50719563 -44553088 - B4A SINE B4 -152 140 1 3 971 1191 214 108 31 chr17 50720086 50720421 -44552230 - ORR1D2 LTR MaLR -6 415 1 3 971 1094 166 41 18 chr17 50720737 50720958 -44551693 - URR1A DNA MER1_type 0 226 1 3 971 214 294 206 0 chr17 50721237 50721305 -44551346 + B4 SINE B4 2 83 -209 3 971 29 28 0 0 chr17 50721333 50721369 -44551282 + AT_rich Low_complexity Low_complexity 1 36 0 3 971 407 282 78 0 chr17 50722988 50723091 -44549560 + ID_B1 SINE B4 93 203 -21 3 971 450 0 0 0 chr17 50724765 50724815 -44547836 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 972 564 116 0 0 chr17 50725929 50726015 -44546636 + (TCCC)n Simple_repeat Simple_repeat 3 88 0 3 972 23 78 0 0 chr17 50726071 50726122 -44546529 + AT_rich Low_complexity Low_complexity 1 51 0 3 972 625 236 65 48 chr17 50726367 50726598 -44546053 + MER33 DNA MER1_type 15 249 -75 3 972 22 0 0 0 chr17 50726630 50726652 -44545999 + AT_rich Low_complexity Low_complexity 1 22 0 3 972 309 109 0 0 chr17 50727108 50727154 -44545497 + (GGA)n Simple_repeat Simple_repeat 3 48 0 3 972 459 241 211 28 chr17 50727362 50727575 -44545076 + MTD LTR MaLR 106 357 -62 3 972 325 269 52 19 chr17 50731997 50732198 -44540453 + L1M4b LINE L1 3531 3607 -3727 3 972 409 177 110 34 chr17 50732209 50732355 -44540296 - Lx9 LINE L1 -1 7643 7487 3 972 1313 121 47 13 chr17 50732358 50732569 -44540082 - Lx4A LINE L1 -490 6568 6372 3 972 1494 33 0 0 chr17 50732571 50732751 -44539900 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 3 972 420 143 0 0 chr17 50732751 50732821 -44539830 + (TCC)n Simple_repeat Simple_repeat 3 72 0 3 972 1196 61 0 0 chr17 50732838 50732985 -44539666 - B1_Mus2 SINE Alu 0 147 1 3 972 6626 119 85 13 chr17 50732986 50734648 -44538003 - Lx4A LINE L1 -675 6383 4588 3 972 419 138 0 21 chr17 50734619 50734713 -44537938 - Lx4A LINE L1 -3955 1922 1833 3 972 200 286 103 43 chr17 50735064 50735181 -44537470 + MIRb SINE MIR 111 234 -34 3 972 407 169 0 43 chr17 50735492 50735585 -44537066 - RMER10A LTR ERVL -16 426 338 3 972 204 40 0 0 chr17 50735759 50735784 -44536867 + (ATTG)n Simple_repeat Simple_repeat 2 26 0 3 972 930 113 0 0 chr17 50735904 50736046 -44536605 + (CA)n Simple_repeat Simple_repeat 1 142 0 3 972 306 0 0 0 chr17 50736047 50736081 -44536570 + (GA)n Simple_repeat Simple_repeat 2 35 0 3 972 1634 167 111 23 chr17 50736630 50736974 -44535677 - ORR1D1 LTR MaLR 0 374 1 3 972 603 221 64 0 chr17 50737451 50737591 -44535060 + B1_Mur3 SINE Alu 1 149 0 3 972 1757 205 27 36 chr17 50739562 50740008 -44532643 - RMER10A LTR ERVL 0 442 1 3 972 714 169 147 7 chr17 50740010 50740153 -44532498 - Lx LINE L1 -642 7054 6892 3 972 243 0 0 0 chr17 50740480 50740507 -44532144 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 972 1352 154 47 68 chr17 50741119 50741397 -44531254 - Lx LINE L1 -8 6646 6375 3 972 22 35 0 0 chr17 50741802 50741831 -44530820 + AT_rich Low_complexity Low_complexity 1 29 0 3 972 230 252 93 108 chr17 50742948 50743206 -44529445 + RMER12 LTR ERVK 735 988 -334 3 972 519 261 0 48 chr17 50743260 50743449 -44529202 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 972 405 206 0 0 chr17 50744572 50744640 -44528011 + ID4_ SINE ID 2 69 -14 3 972 301 324 18 18 chr17 50745229 50745342 -44527309 + MER45A DNA Tip100 27 139 -39 3 972 1016 198 86 5 chr17 50748812 50749010 -44523641 - B3 SINE B2 -1 215 2 3 972 927 318 43 43 chr17 50749823 50750287 -44522364 - MT2A LTR ERVL -69 464 1 3 972 287 297 74 6 chr17 50751174 50751299 -44521352 - B4 SINE B4 -18 147 3 3 972 608 192 6 121 chr17 50751517 50751683 -44520968 + B1_Mur3 SINE Alu 2 148 -1 3 972 637 253 72 0 chr17 50751973 50752139 -44520512 - MTEb LTR MaLR -200 179 2 3 972 484 280 26 35 chr17 50752252 50752478 -44520173 + L1_Mur3 LINE L1 1961 2184 -3696 3 972 462 279 52 0 chr17 50752475 50752629 -44520022 + L1_Mur3 LINE L1 3433 3594 -2283 3 972 201 154 0 0 chr17 50752653 50752692 -44519959 + T-rich Low_complexity Low_complexity 1 39 0 3 972 964 251 37 40 chr17 50752692 50753045 -44519606 + L1_Mur3 LINE L1 5184 5535 -345 3 972 2550 283 135 11 chr17 50753030 50753545 -44519106 + Lx8 LINE L1 6381 6956 -517 3 972 360 43 0 0 chr17 50753545 50753591 -44519060 + (CCA)n Simple_repeat Simple_repeat 2 47 0 3 972 2550 283 135 11 chr17 50753591 50754047 -44518604 + Lx8 LINE L1 6957 7471 -2 3 972 186 143 0 0 chr17 50754487 50754522 -44518129 + (T)n Simple_repeat Simple_repeat 1 35 0 3 972 231 155 207 0 chr17 50755423 50755481 -44517170 - MTD LTR MaLR -348 71 2 3 972 2875 240 179 35 chr17 50755485 50756583 -44516068 - MTD-int LTR MaLR -3 1255 1 3 972 586 247 104 35 chr17 50756585 50756786 -44515865 - MTD LTR MaLR -2 417 203 3 972 608 0 14 0 chr17 50756800 50756872 -44515779 + (TC)n Simple_repeat Simple_repeat 1 73 0 3 972 7128 94 33 16 chr17 50756872 50758128 -44514523 - Lx LINE L1 -12 6642 5362 3 972 1830 155 101 3 chr17 50758113 50758468 -44514183 + Lx LINE L1 4976 5365 -521 3 972 763 209 138 5 chr17 50758468 50758656 -44513995 - MTD LTR MaLR -206 213 1 3 972 21 0 0 0 chr17 50758838 50758859 -44513792 + AT_rich Low_complexity Low_complexity 1 21 0 3 972 554 277 46 41 chr17 50759477 50759673 -44512978 - B3 SINE B2 -19 197 1 3 972 813 275 31 31 chr17 50762028 50762099 -44510552 + B4 SINE B4 3 72 -220 3 972 435 38 0 0 chr17 50762099 50762152 -44510499 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 972 813 275 31 31 chr17 50762152 50762339 -44510312 + B4 SINE B4 73 260 -32 3 972 306 0 0 0 chr17 50762358 50762392 -44510259 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 972 266 308 43 21 chr17 50763053 50763146 -44509505 - PB1D7 SINE Alu -1 119 25 4 972 496 259 191 12 chr17 50763228 50763474 -44509177 - B4A SINE B4 -2 290 1 4 972 225 65 0 0 chr17 50764685 50764716 -44507935 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 972 189 0 0 0 chr17 50765613 50765634 -44507017 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 4 972 707 288 154 38 chr17 50769051 50769394 -44503257 + Tigger9b DNA MER2_type 6 388 -236 4 972 519 225 0 24 chr17 50769443 50769566 -44503085 + Tigger9b DNA MER2_type 501 620 -4 4 972 468 336 83 30 chr17 50769813 50770285 -44502366 - Lx8 LINE L1 -2 7471 6975 4 972 554 252 30 8 chr17 50772396 50772528 -44500123 + B1_Mus2 SINE Alu 1 135 -12 4 972 501 17 0 0 chr17 50772609 50772667 -44499984 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 972 24 91 0 0 chr17 50773205 50773271 -44499380 + AT_rich Low_complexity Low_complexity 1 66 0 4 972 189 0 0 0 chr17 50774339 50774360 -44498291 + (CTG)n Simple_repeat Simple_repeat 1 21 0 4 972 291 93 0 0 chr17 50774740 50774783 -44497868 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 972 21 0 0 0 chr17 50775824 50775845 -44496806 + AT_rich Low_complexity Low_complexity 1 21 0 4 972 7700 62 0 17 chr17 50775985 50776975 -44495676 + L1Md_F2 LINE L1 4614 5586 -297 4 972 7812 59 4 14 chr17 50776975 50777745 -44494906 + L1Md_F2 LINE L1 5587 6351 -231 4 972 405 0 0 0 chr17 50777745 50777790 -44494861 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 972 7812 59 4 14 chr17 50777790 50778020 -44494631 + L1Md_F2 LINE L1 6352 6577 -5 4 972 877 86 285 0 chr17 50778692 50778843 -44493808 - B2_Mm2 SINE B2 0 195 2 4 972 442 264 40 8 chr17 50778980 50779106 -44493545 + B1F SINE Alu 1 130 -19 4 972 213 94 0 0 chr17 50779116 50779148 -44493503 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 4 972 396 299 28 0 chr17 50779749 50779856 -44492795 + PB1D10 SINE Alu 3 112 -5 4 972 940 103 26 46 chr17 50780226 50780378 -44492273 - B1_Mur3 SINE Alu 0 149 1 4 972 1194 34 17 17 chr17 50782461 50782640 -44490011 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 972 207 0 0 0 chr17 50782640 50782662 -44489989 + (GA)n Simple_repeat Simple_repeat 2 24 0 4 972 718 157 6 6 chr17 50783862 50784022 -44488629 + GA-rich Low_complexity Low_complexity 1 160 0 4 972 834 39 0 0 chr17 50785646 50785748 -44486903 + (TC)n Simple_repeat Simple_repeat 2 103 0 4 972 230 182 39 13 chr17 50786633 50786711 -44485940 + (TATAA)n Simple_repeat Simple_repeat 1 80 0 4 972 1612 197 17 79 chr17 50787203 50787606 -44485045 - RLTR1B LTR ERV1 0 512 135 4 972 999 251 39 129 chr17 50787886 50788298 -44484353 + MTE2a LTR MaLR 5 379 0 4 972 322 296 179 15 chr17 50788654 50788928 -44483723 - L2 LINE L2 -782 2637 2319 4 972 319 240 48 8 chr17 50789371 50789497 -44483154 + (TA)n Simple_repeat Simple_repeat 2 132 0 4 972 243 260 0 0 chr17 50790793 50790843 -44481808 - MER2 DNA MER2_type -279 66 17 4 972 21 0 0 0 chr17 50791441 50791462 -44481189 + AT_rich Low_complexity Low_complexity 1 21 0 4 972 311 318 117 16 chr17 50791573 50791829 -44480822 + B4A SINE B4 10 291 -1 4 972 390 254 184 15 chr17 50792383 50792519 -44480132 + B3A SINE B2 3 161 -37 4 972 759 112 0 0 chr17 50792520 50792636 -44480015 + (CA)n Simple_repeat Simple_repeat 1 116 0 4 972 249 33 0 0 chr17 50792969 50792999 -44479652 + (CCTG)n Simple_repeat Simple_repeat 1 30 0 4 972 438 119 0 0 chr17 50793001 50793085 -44479566 + (TC)n Simple_repeat Simple_repeat 1 84 0 4 972 387 0 0 0 chr17 50793085 50793128 -44479523 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 972 318 313 89 53 chr17 50793129 50793298 -44479353 - B4 SINE B4 -22 270 96 4 972 4205 54 0 21 chr17 50793319 50793847 -44478804 - L1_Mus1 LINE L1 0 6567 6051 4 972 28 61 0 0 chr17 50795103 50795152 -44477499 + AT_rich Low_complexity Low_complexity 1 49 0 4 972 432 0 0 0 chr17 50796595 50796643 -44476008 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 972 782 316 22 26 chr17 50796666 50796936 -44475715 - B4 SINE B4 0 292 24 4 972 849 254 17 19 chr17 50797282 50797493 -44475158 - B3 SINE B2 -4 212 3 4 972 317 239 152 27 chr17 50797627 50797739 -44474912 + PB1 SINE Alu 1 126 -1 4 972 462 274 8 17 chr17 50797745 50797864 -44474787 + RSINE1 SINE B4 4 121 -44 4 972 699 156 0 0 chr17 50798779 50798901 -44473750 + CT-rich Low_complexity Low_complexity 3 124 0 4 972 515 154 22 0 chr17 50798927 50799018 -44473633 - B1_Mur4 SINE Alu 0 150 58 4 972 1057 205 50 16 chr17 50799047 50799305 -44473346 - ORR1D1 LTR MaLR 0 374 108 4 972 526 286 49 66 chr17 50799358 50799813 -44472838 + Lx7 LINE L1 5689 6189 -1507 4 972 297 109 0 0 chr17 50799813 50799859 -44472792 + (CATA)n Simple_repeat Simple_repeat 1 46 0 4 972 400 295 43 34 chr17 50799859 50799909 -44472742 + Lx7 LINE L1 6190 6243 -1453 4 972 2600 104 17 40 chr17 50799921 50800342 -44472309 - IAPLTR2a LTR ERVK 0 411 1 4 972 26669 16 4 0 chr17 50800342 50803279 -44469372 - IAPEz-int LTR ERVK 0 6481 3533 4 972 959 92 0 8 chr17 50803254 50803385 -44469266 - IAPEz-int LTR ERVK -2768 4912 4783 4 972 1824 123 4 4 chr17 50803380 50803642 -44469009 - IAPEz-int LTR ERVK -5183 2497 2236 4 972 434 98 0 32 chr17 50803631 50803694 -44468957 - IAPEz-int LTR ERVK -5062 1419 1359 4 972 3491 96 12 37 chr17 50803694 50804505 -44468146 - IAPEz-int LTR ERVK -5819 662 30 4 972 2569 109 17 40 chr17 50804546 50804967 -44467684 - IAPLTR2a LTR ERVK 0 411 1 4 972 1652 296 67 31 chr17 50804972 50805589 -44467062 + Lx7 LINE L1 6256 6894 -802 4 972 1842 179 106 8 chr17 50805643 50806010 -44466641 + MTC LTR MaLR 18 420 -1 4 972 712 330 61 22 chr17 50806010 50806370 -44466281 + Lx8 LINE L1 6953 7326 -147 4 972 249 189 0 0 chr17 50806459 50806512 -44466139 + CT-rich Low_complexity Low_complexity 2 54 0 4 972 189 0 0 0 chr17 50806512 50806533 -44466118 + (CA)n Simple_repeat Simple_repeat 1 21 0 4 972 1477 252 48 11 chr17 50807437 50807794 -44464857 - ORR1D2 LTR MaLR 0 370 1 4 972 2138 213 136 58 chr17 50807794 50808881 -44463770 - ORR1D2-int LTR MaLR 0 1370 199 4 972 226 176 100 29 chr17 50808885 50808955 -44463696 - Lx9 LINE L1 -618 7026 6952 4 972 5786 190 91 49 chr17 50809034 50810299 -44462352 - Lx9 LINE L1 -18 7626 6337 4 972 378 0 0 0 chr17 50810299 50810341 -44462310 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 972 5786 190 91 49 chr17 50810341 50810536 -44462115 - Lx9 LINE L1 -1308 6336 6105 4 972 2629 223 14 58 chr17 50810533 50811311 -44461340 + Lx9 LINE L1 5187 5976 -1668 4 972 437 289 9 0 chr17 50811318 50811432 -44461219 - ORR1D2-int LTR MaLR -1250 120 6 4 972 698 312 64 0 chr17 50811436 50811670 -44460981 - ORR1D2 LTR MaLR -1 369 121 4 972 2670 169 61 25 chr17 50812361 50812557 -44460094 - RLTR20B3 LTR ERVK 0 577 381 4 972 1958 209 67 32 chr17 50812557 50813121 -44459530 - RLTR31A_Mm LTR ERVK 0 584 1 4 972 2670 169 61 25 chr17 50813121 50813481 -44459170 - RLTR20B3 LTR ERVK -197 380 1 4 972 460 0 33 0 chr17 50813678 50813738 -44458913 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 972 304 292 90 41 chr17 50814042 50814406 -44458245 - LTR48B LTR ERV1 -105 539 110 4 972 351 0 0 0 chr17 50814971 50815010 -44457641 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 4 972 402 204 101 9 chr17 50815012 50815121 -44457530 - B3 SINE B2 -16 200 82 4 972 1457 119 35 63 chr17 50815368 50815654 -44456997 - RLTR11A LTR ERVK -2 526 249 4 972 1166 55 0 20 chr17 50816098 50816247 -44456404 - B1_Mus2 SINE Alu -1 146 1 4 972 873 254 26 5 chr17 50816292 50816486 -44456165 - B3A SINE B2 0 198 1 4 972 321 100 0 0 chr17 50816546 50816596 -44456055 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 972 307 247 0 0 chr17 50816773 50816846 -44455805 - ID4_ SINE ID -9 74 2 4 972 414 0 0 0 chr17 50817030 50817076 -44455575 + (CGTG)n Simple_repeat Simple_repeat 2 47 0 4 972 365 270 142 8 chr17 50818088 50818215 -44454436 - MLT1H2 LTR MaLR -1 488 345 4 972 387 0 0 0 chr17 50818302 50818345 -44454306 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 972 619 269 30 20 chr17 50820571 50820768 -44451883 + B3 SINE B2 8 206 -10 4 972 486 304 61 33 chr17 50820815 50821060 -44451591 - L1MC1 LINE L1 -1 6332 6081 4 972 301 260 13 25 chr17 50821098 50821177 -44451474 - ID4_ SINE ID -3 80 3 4 972 272 206 134 101 chr17 50821244 50821363 -44451288 - L1MC1 LINE L1 -268 6065 5943 4 972 1413 173 120 29 chr17 50821740 50822116 -44450535 - RMER17C LTR ERVK 0 410 1 4 972 244 225 9 160 chr17 50822312 50822418 -44450233 + Lx9 LINE L1 6192 6281 -1363 4 972 1930 243 113 10 chr17 50822556 50823193 -44449458 - Lx9 LINE L1 -1616 6028 5273 4 972 634 284 122 18 chr17 50823162 50823489 -44449162 - L1_Mur3 LINE L1 -2013 3867 3507 4 972 181 329 100 0 chr17 50824211 50824281 -44448370 - L2b LINE L2 -5 3370 3294 4 972 396 0 0 0 chr17 50824286 50824330 -44448321 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 972 287 288 49 41 chr17 50824516 50824639 -44448012 - L2b LINE L2 -519 2900 2777 4 972 546 275 110 7 chr17 50824956 50825238 -44447413 + L1MC LINE L1 3120 3430 -2716 4 972 997 285 152 20 chr17 50825243 50825698 -44446953 + L1MC LINE L1 3637 4151 -1995 4 972 406 148 62 0 chr17 50825840 50825921 -44446730 + MTD LTR MaLR 17 102 -317 4 972 467 229 73 0 chr17 50825949 50826058 -44446593 + ID_B1 SINE B4 108 224 0 4 972 226 163 23 0 chr17 50826656 50826699 -44445952 + ORR1E LTR MaLR 10 53 -306 4 972 234 81 0 0 chr17 50829477 50829514 -44443137 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 4 972 279 93 0 0 chr17 50829833 50829876 -44442775 + (ATTG)n Simple_repeat Simple_repeat 1 43 0 4 972 3473 132 25 40 chr17 50830064 50830656 -44441995 - RMER4B LTR ERVK -2 583 1 4 972 1790 128 77 7 chr17 50830656 50830954 -44441697 - MurERV4-int LTR ERVK 0 5260 4942 4 972 511 216 0 10 chr17 50831035 50831138 -44441513 - MurERV4-int LTR ERVK -3576 1684 1583 4 972 1937 108 46 0 chr17 50831142 50831449 -44441202 + ORR1A2 LTR MaLR 7 327 0 4 972 1268 223 192 9 chr17 50831453 50831896 -44440755 - RMER4B LTR ERVK -44 541 18 4 972 1941 183 132 16 chr17 50831896 50832526 -44440125 - MurERV4-int LTR ERVK -4433 827 1 4 972 2810 166 55 25 chr17 50832526 50833062 -44439589 - RMER4B LTR ERVK 0 585 32 4 972 207 0 0 0 chr17 50833062 50833085 -44439566 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 4 972 2810 166 55 25 chr17 50833085 50833116 -44439535 - RMER4B LTR ERVK -554 31 1 4 972 492 296 20 14 chr17 50833886 50834033 -44438618 + RSINE1 SINE B4 11 158 -7 4 972 2603 84 94 29 chr17 50834033 50834414 -44438237 + MTB LTR MaLR 1 406 -1 4 972 6646 103 20 82 chr17 50834415 50835586 -44437065 + MTB-int LTR MaLR 1 1098 0 4 972 3370 43 2 2 chr17 50835586 50835986 -44436665 + MTB LTR MaLR 1 400 0 4 972 1055 103 0 5 chr17 50836003 50836207 -44436444 + (GGAA)n Simple_repeat Simple_repeat 1 203 0 4 972 22 35 0 0 chr17 50836665 50836694 -44435957 + AT_rich Low_complexity Low_complexity 1 29 0 4 972 4627 45 2 18 chr17 50836698 50837263 -44435388 - L1_Mus1 LINE L1 -2 6565 6010 4 972 610 60 0 0 chr17 50837401 50837484 -44435167 - L1_Mus2 LINE L1 0 6566 6484 4 972 2223 134 3 14 chr17 50837486 50837848 -44434803 - L1_Mm LINE L1 -949 4934 4577 4 972 1125 115 20 10 chr17 50839220 50839411 -44433240 - L1_Mm LINE L1 -1526 4620 4427 4 972 35295 72 10 8 chr17 50839405 50845595 -44427056 - L1Md_F2 LINE L1 -10 6572 373 4 972 2592 186 64 62 chr17 50845593 50845643 -44427008 - L1Md_F LINE L1 -5493 1026 984 5 972 2201 73 166 3 chr17 50845643 50845957 -44426694 - RLTR10B2 LTR ERVK 0 365 1 5 972 2592 186 64 62 chr17 50845957 50846565 -44426086 - L1Md_F LINE L1 -5536 983 368 5 972 480 214 39 0 chr17 50846570 50846673 -44425978 - ORR1C1 LTR MaLR 0 378 272 5 972 528 175 48 0 chr17 50846675 50846778 -44425873 - ORR1C1 LTR MaLR -270 108 1 5 972 3686 167 43 8 chr17 50846778 50847498 -44425153 - ORR1C1-int LTR MaLR 0 1509 765 5 972 267 282 89 0 chr17 50847793 50847917 -44424734 - HAL1 LINE L1 -846 1661 1527 5 972 480 279 73 0 chr17 50849576 50849712 -44422939 + B1F SINE Alu 3 148 -1 5 972 351 0 0 0 chr17 50850002 50850041 -44422610 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 972 495 0 0 0 chr17 50850483 50850538 -44422113 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 972 1967 193 70 29 chr17 50851058 50851543 -44421108 + RLTR16 LTR ERVK 1 505 0 5 972 3119 190 2 31 chr17 50851543 50852151 -44420500 + Lx2B LINE L1 6409 6998 -2 5 972 300 111 22 0 chr17 50853456 50853501 -44419150 + Lx3B LINE L1 6215 6260 -713 5 972 545 108 24 0 chr17 50853496 50853579 -44419072 + Lx3_Mus LINE L1 6321 6405 -604 5 972 9222 117 46 11 chr17 50853575 50854751 -44417900 - MusHAL1 LINE L1 -1053 1659 432 5 972 2130 164 42 98 chr17 50854751 50855086 -44417565 + RLTR41 LTR ERV1 1 321 -125 5 972 513 47 0 0 chr17 50855086 50855150 -44417501 + (TC)n Simple_repeat Simple_repeat 1 64 0 5 972 2130 164 42 98 chr17 50855150 50855286 -44417365 + RLTR41 LTR ERV1 322 445 -1 5 972 9222 117 46 11 chr17 50855286 50855674 -44416977 - MusHAL1 LINE L1 -2281 431 41 5 972 289 256 197 50 chr17 50855686 50855904 -44416747 - L1VL2 LINE L1 -6021 314 65 5 973 426 165 0 0 chr17 50855951 50856030 -44416621 + (TA)n Simple_repeat Simple_repeat 2 80 0 5 973 311 305 9 37 chr17 50856030 50856139 -44416512 - RMER12 LTR ERVK -471 851 746 5 973 613 246 159 14 chr17 50856153 50856473 -44416178 - L1M2 LINE L1 -716 5584 5220 5 973 2266 138 27 0 chr17 50856480 50856856 -44415795 - ORR1B1 LTR MaLR -8 386 1 5 973 1749 212 154 14 chr17 50856856 50857445 -44415206 - RMER1B Other Other -269 797 126 5 973 25 0 0 0 chr17 50857893 50857918 -44414733 + AT_rich Low_complexity Low_complexity 1 25 0 5 973 290 174 0 0 chr17 50857926 50857972 -44414679 - B1F1 SINE Alu -30 119 74 5 973 759 284 31 12 chr17 50858018 50858267 -44414384 - Lx7 LINE L1 -410 7286 7033 5 973 2190 147 86 16 chr17 50858267 50858696 -44413955 - RMER6B LTR ERVK -2 459 1 5 973 4182 100 7 10 chr17 50858702 50859299 -44413352 - MYSERV6-int LTR ERVK -1197 7762 7168 5 973 8267 108 9 20 chr17 50859296 50860558 -44412093 - MYSERV6-int LTR ERVK -5002 3957 2710 5 973 3866 132 101 8 chr17 50860573 50861475 -44411176 - MYSERV6-int LTR ERVK -7954 1005 20 5 973 697 141 0 8 chr17 50861510 50861632 -44411019 - RMER6B LTR ERVK -339 122 2 5 973 582 265 0 0 chr17 50861641 50861773 -44410878 - Lx7 LINE L1 -664 7032 6901 5 973 354 223 62 55 chr17 50861774 50861902 -44410749 - RLTR42-int LTR ERVK -1779 4358 4230 5 973 325 276 0 0 chr17 50862416 50862492 -44410159 - RLTR42-int LTR ERVK -2028 4109 4034 5 973 838 241 73 91 chr17 50862460 50862965 -44409686 - RLTR42-int LTR ERVK -2168 3969 3641 5 973 365 241 53 133 chr17 50863274 50863537 -44409114 - RLTR42-int LTR ERVK -2493 3644 3403 5 973 753 255 146 135 chr17 50864307 50865122 -44407529 - RLTR42-int LTR ERVK -2979 3158 2335 5 973 994 191 16 47 chr17 50865111 50865364 -44407287 - RLTR42-int LTR ERVK -3400 2122 1878 5 973 1731 164 154 64 chr17 50865680 50866089 -44406562 + RLTR41 LTR ERV1 1 446 0 5 973 1363 229 136 166 chr17 50866237 50866368 -44406283 - RLTR42-int LTR ERVK -3727 1795 1608 5 973 563 0 0 15 chr17 50866368 50866436 -44406215 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 5 973 1363 229 136 166 chr17 50866436 50867016 -44405635 - RLTR42-int LTR ERVK -3915 1607 1105 5 973 575 27 14 0 chr17 50868044 50868117 -44404534 + (GA)n Simple_repeat Simple_repeat 1 74 0 5 973 337 228 27 90 chr17 50868283 50868394 -44404257 - Lx7 LINE L1 -1326 6370 6267 5 973 2001 140 78 59 chr17 50868465 50868852 -44403799 + ORR1B1 LTR MaLR 1 394 0 5 973 336 216 91 11 chr17 50868892 50869005 -44403646 + Lx7 LINE L1 6118 6236 -1460 5 973 714 176 285 0 chr17 50869280 50869445 -44403206 - B3 SINE B2 0 216 5 5 973 222 330 96 10 chr17 50869937 50870041 -44402610 + L2b LINE L2 3244 3356 -19 5 973 257 65 65 0 chr17 50872128 50872174 -44400477 + (TGGGGG)n Simple_repeat Simple_repeat 4 52 0 5 973 232 287 53 0 chr17 50875326 50875420 -44397231 + (CTGGGG)n Simple_repeat Simple_repeat 2 100 0 5 973 248 179 0 0 chr17 50876333 50876372 -44396279 + B1_Mus1 SINE Alu 11 49 -99 5 973 362 198 86 94 chr17 50877153 50877270 -44395381 - PB1D10 SINE Alu 0 117 2 5 973 281 79 25 62 chr17 50878726 50878807 -44393844 + A-rich Low_complexity Low_complexity 2 79 0 5 973 1085 69 14 0 chr17 50879438 50879583 -44393068 + B1_Mus1 SINE Alu 1 147 -1 5 973 284 238 48 48 chr17 50879616 50879700 -44392951 + B4A SINE B4 84 167 -125 5 973 466 186 41 0 chr17 50879640 50879737 -44392914 + PB1D7 SINE Alu 19 119 -1 5 973 299 286 143 0 chr17 50879761 50879866 -44392785 + RSINE1 SINE B4 8 127 -38 5 973 28 29 0 0 chr17 50879880 50879915 -44392736 + AT_rich Low_complexity Low_complexity 1 35 0 5 973 7290 80 20 22 chr17 50883060 50884232 -44388419 + L1VL4 LINE L1 483 1658 -1901 5 973 1080 75 0 0 chr17 50884232 50884366 -44388285 + B1_Mm SINE Alu 2 135 -12 5 973 231 36 0 0 chr17 50884366 50884394 -44388257 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 5 973 7290 73 13 22 chr17 50884394 50884655 -44387996 + L1VL4 LINE L1 1659 1906 -1653 5 973 3929 281 63 101 chr17 50884655 50885259 -44387392 + L1_Mur3 LINE L1 3197 3675 -2202 5 973 1007 243 9 5 chr17 50885259 50885474 -44387177 + B3 SINE B2 1 216 0 5 973 5370 258 77 32 chr17 50885474 50887555 -44385096 + L1_Mur3 LINE L1 3676 5781 -99 5 973 3956 193 56 9 chr17 50887568 50888896 -44383755 + Lx5 LINE L1 5137 6773 -687 5 973 189 0 0 0 chr17 50888966 50888987 -44383664 + (CAA)n Simple_repeat Simple_repeat 1 21 0 5 973 225 0 0 0 chr17 50889010 50889035 -44383616 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 5 973 1021 239 186 28 chr17 50889035 50889358 -44383293 + Lx5 LINE L1 6759 7132 -328 5 973 643 109 8 98 chr17 50889369 50889491 -44383160 + MT2B2 LTR ERVL 474 584 0 5 973 236 282 28 0 chr17 50890858 50890929 -44381722 - AmnSINE1 SINE SINE -479 96 24 5 973 279 0 0 0 chr17 50891846 50891877 -44380774 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 973 691 262 14 0 chr17 50891890 50892035 -44380616 - B3A SINE B2 -48 150 4 5 973 23 0 0 0 chr17 50894303 50894326 -44378325 + AT_rich Low_complexity Low_complexity 1 23 0 5 973 258 302 25 88 chr17 50894503 50894715 -44377936 - B4A SINE B4 -102 190 1 5 973 185 286 116 23 chr17 50895760 50895889 -44376762 + MIR SINE MIR 51 191 -71 5 973 321 26 0 0 chr17 50896126 50896164 -44376487 + (TAA)n Simple_repeat Simple_repeat 1 38 0 5 973 890 192 0 20 chr17 50896173 50896322 -44376329 - B1_Mur1 SINE Alu -2 147 2 5 973 3345 184 34 57 chr17 50896430 50897373 -44375278 + RMER1B Other Other 2 1053 -13 5 973 200 247 11 63 chr17 50897598 50897693 -44374958 + A-rich Low_complexity Low_complexity 3 92 0 5 973 288 0 0 0 chr17 50897805 50897837 -44374814 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 973 594 139 47 0 chr17 50898032 50898161 -44374490 + GA-rich Low_complexity Low_complexity 5 139 0 5 973 268 372 50 21 chr17 50899206 50899346 -44373305 + MLT1H1 LTR MaLR 328 471 -84 5 973 188 297 88 0 chr17 50899428 50899518 -44373133 + MIRc SINE MIR 35 131 -137 5 973 310 310 42 36 chr17 50900778 50900972 -44371679 + MIR SINE MIR 2 200 -8 5 973 2155 84 25 13 chr17 50901333 50901648 -44371003 - ORR1A2 LTR MaLR -8 319 1 5 973 254 246 0 0 chr17 50901652 50901713 -44370938 - MIR SINE MIR -54 208 148 5 973 360 306 37 0 chr17 50901949 50902057 -44370594 + PB1D7 SINE Alu 8 119 -1 5 973 289 377 75 0 chr17 50903784 50903943 -44368708 + B4A SINE B4 15 185 -107 5 973 274 304 0 0 chr17 50903949 50904018 -44368633 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 973 438 200 0 167 chr17 50904143 50904263 -44368388 + B4A SINE B4 193 292 0 5 973 617 207 65 52 chr17 50904271 50904364 -44368287 - RLTR20A2 LTR ERVK 0 578 481 5 973 504 0 0 0 chr17 50904364 50904420 -44368231 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 973 617 207 65 52 chr17 50904420 50904479 -44368172 - RLTR20A2 LTR ERVK -98 480 425 5 973 321 219 150 93 chr17 50904462 50904723 -44367928 - RLTR20A2 LTR ERVK -277 291 1 5 973 660 271 54 133 chr17 50905339 50905539 -44367112 - RLTR31_Mm LTR ERVK -1 556 387 5 973 189 0 0 0 chr17 50905539 50905560 -44367091 + (TTG)n Simple_repeat Simple_repeat 1 21 0 5 973 918 41 0 83 chr17 50905560 50905693 -44366958 - B1_Mm SINE Alu -13 134 13 5 973 1161 196 75 143 chr17 50905693 50906067 -44366584 - RLTR31_Mm LTR ERVK -171 386 2 5 973 537 328 132 33 chr17 50907292 50907595 -44365056 + Tigger9b DNA MER2_type 2 334 -290 5 973 522 84 0 12 chr17 50907819 50907903 -44364748 - L1Md_F2 LINE L1 0 6582 6500 5 973 7183 76 75 4 chr17 50908130 50909107 -44363544 + L1_Mus3 LINE L1 5587 6632 -6 5 973 1642 88 66 8 chr17 50909477 50909718 -44362933 + Lx LINE L1 6396 6650 -4 5 973 231 226 0 0 chr17 50909720 50909773 -44362878 + A-rich Low_complexity Low_complexity 1 53 0 5 973 1547 242 48 8 chr17 50910508 50910879 -44361772 - MTD LTR MaLR -8 411 26 5 973 197 98 0 24 chr17 50910888 50910930 -44361721 + (CAACC)n Simple_repeat Simple_repeat 2 42 0 5 973 5275 70 3 5 chr17 50911224 50912207 -44360444 + L1_Mus1 LINE L1 5262 6242 -325 5 973 1769 65 13 0 chr17 50912235 50912466 -44360185 + L1_Mus1 LINE L1 5818 6051 -516 5 973 2529 77 3 18 chr17 50912466 50912795 -44359856 + L1_Mus1 LINE L1 6244 6567 0 5 973 560 141 45 46 chr17 50913197 50913333 -44359318 + ORR1A4 LTR MaLR 1 154 -240 5 973 1768 118 26 4 chr17 50913333 50913605 -44359046 + Lx3C LINE L1 6647 6924 -52 5 973 549 0 0 0 chr17 50914553 50914614 -44358037 + (TC)n Simple_repeat Simple_repeat 2 62 0 5 973 228 35 0 0 chr17 50914614 50914642 -44358009 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 973 229 340 73 21 chr17 50915294 50915390 -44357261 + MLT1L LTR MaLR 160 260 -350 5 973 1061 54 0 15 chr17 50916214 50916346 -44356305 - L1Md_F2 LINE L1 -457 6125 5996 5 973 352 210 242 8 chr17 50916397 50916517 -44356134 - B1F SINE Alu 0 149 2 5 973 22 0 0 0 chr17 50916536 50916558 -44356093 + AT_rich Low_complexity Low_complexity 1 22 0 5 973 4086 58 2 32 chr17 50917919 50918416 -44354235 + LTRIS_Mm LTR ERV1 1 482 0 5 973 333 332 109 80 chr17 50918416 50918727 -44353924 - HAL1 LINE L1 -49 2458 2139 5 973 280 247 14 0 chr17 50919365 50919438 -44353213 - B4 SINE B4 -217 75 2 5 973 407 250 90 90 chr17 50919439 50919694 -44352957 - HAL1 LINE L1 -1210 1297 1043 5 973 379 285 172 0 chr17 50919701 50919852 -44352799 + MER2 DNA MER2_type 1 177 -168 6 973 296 316 94 39 chr17 50920220 50920401 -44352250 - HAL1 LINE L1 -1898 609 419 5 973 743 126 8 0 chr17 50920415 50920534 -44352117 + ORR1A4 LTR MaLR 195 314 -15 6 973 663 135 8 38 chr17 50920541 50920672 -44351979 + Lx9 LINE L1 7518 7644 0 6 973 988 215 53 19 chr17 50920758 50920967 -44351684 + B3 SINE B2 1 216 0 6 973 180 0 0 0 chr17 50923244 50923264 -44349387 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 973 9476 135 57 8 chr17 50923836 50925512 -44347139 - ORR1A2-int LTR MaLR -202 1761 3 6 973 2185 112 3 0 chr17 50925544 50925856 -44346795 - ORR1A2 LTR MaLR -14 313 1 6 973 259 349 23 0 chr17 50925858 50925944 -44346707 - ID_B1 SINE B4 -129 95 8 6 973 2013 281 149 50 chr17 50925972 50927427 -44345224 - L1M4 LINE L1 -4869 1673 75 6 973 830 84 0 0 chr17 50927914 50928021 -44344630 - B1_Mus2 SINE Alu -12 135 29 6 973 188 86 0 28 chr17 50928118 50928154 -44344497 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 6 973 834 174 14 20 chr17 50928290 50928437 -44344214 + B1_Mur4 SINE Alu 1 146 -4 6 973 387 119 0 0 chr17 50928438 50928505 -44344146 + (CA)n Simple_repeat Simple_repeat 2 68 0 6 973 346 83 0 20 chr17 50928619 50928668 -44343983 + HAL1-3A_ME LINE L1 1977 2024 -834 6 973 521 305 15 0 chr17 50928772 50928903 -44343748 - B1F1 SINE Alu -12 137 5 6 973 446 0 19 0 chr17 50929270 50929324 -44343327 + (GA)n Simple_repeat Simple_repeat 1 55 0 6 973 252 0 0 0 chr17 50929654 50929682 -44342969 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 6 973 461 194 213 0 chr17 50929793 50929901 -44342750 - B1_Mm SINE Alu -2 145 15 6 973 220 270 199 81 chr17 50929797 50929958 -44342693 - B4A SINE B4 -71 221 42 6 973 355 332 80 64 chr17 50930030 50930491 -44342160 + MLT1D LTR MaLR 14 478 -149 6 973 212 86 29 0 chr17 50930650 50930685 -44341966 + (TTTTC)n Simple_repeat Simple_repeat 2 37 0 6 973 1259 74 0 0 chr17 50930685 50930833 -44341818 - B1_Mus1 SINE Alu 0 148 1 6 973 826 212 51 51 chr17 50930944 50931158 -44341493 - B3 SINE B2 0 216 3 6 973 1671 240 65 87 chr17 50931480 50932023 -44340628 + RMER5 LTR ERV1 4 534 0 6 973 400 146 22 0 chr17 50935097 50935186 -44337465 + GA-rich Low_complexity Low_complexity 1 91 0 6 973 23 54 0 0 chr17 50935385 50935422 -44337229 + AT_rich Low_complexity Low_complexity 1 37 0 6 973 279 79 0 0 chr17 50935942 50935980 -44336671 + (GAAA)n Simple_repeat Simple_repeat 2 39 0 6 973 205 105 50 50 chr17 50936315 50936375 -44336276 + (TATAA)n Simple_repeat Simple_repeat 3 62 0 6 973 232 259 100 100 chr17 50938215 50938395 -44334256 - Tigger15a DNA TcMar -162 553 374 6 973 615 88 0 0 chr17 50939234 50939325 -44333326 + (CTG)n Simple_repeat Simple_repeat 3 93 0 6 973 1415 79 11 6 chr17 50943279 50943458 -44329193 + B2_Mm2 SINE B2 2 181 -14 6 973 1201 50 0 41 chr17 50943460 50943607 -44329044 - B1_Mus2 SINE Alu -5 142 2 6 973 21 0 0 0 chr17 50943617 50943638 -44329013 + AT_rich Low_complexity Low_complexity 1 21 0 6 973 1319 161 24 0 chr17 50943894 50944099 -44328552 + B3 SINE B2 2 211 -5 6 973 481 256 84 29 chr17 50944110 50944673 -44327978 + Lx8 LINE L1 5285 5902 -1794 6 973 23 33 0 0 chr17 50944885 50944915 -44327736 + AT_rich Low_complexity Low_complexity 1 30 0 6 973 819 188 0 32 chr17 50945000 50945154 -44327497 - B1_Mur2 SINE Alu 0 149 1 6 973 234 311 88 18 chr17 50946200 50946426 -44326225 + L1M4 LINE L1 4550 4791 -1355 6 973 248 286 14 106 chr17 50946472 50946530 -44326121 + L1M4 LINE L1 4879 4937 -1209 6 973 1106 217 165 12 chr17 50946530 50946852 -44325799 + ORR1D1 LTR MaLR 1 371 -3 6 973 248 286 14 106 chr17 50946852 50946934 -44325717 + L1M4 LINE L1 4938 5006 -1140 6 973 231 333 0 0 chr17 50947021 50947111 -44325540 + Lx8 LINE L1 7097 7186 -458 6 973 537 16 0 0 chr17 50947121 50947183 -44325468 + (CATA)n Simple_repeat Simple_repeat 4 65 0 6 973 379 290 0 0 chr17 50947210 50947310 -44325341 - Lx7 LINE L1 -738 6958 6859 6 973 370 311 74 12 chr17 50947377 50947540 -44325111 - RMER15 LTR ERVL -65 510 338 6 973 211 239 0 0 chr17 50947900 50947946 -44324705 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 6 973 428 331 136 52 chr17 50948262 50948797 -44323854 - L2 LINE L2 -595 2824 2245 6 973 6859 118 45 11 chr17 50948819 50949911 -44322740 + Lx4A LINE L1 5928 7056 -2 6 973 373 152 290 11 chr17 50950071 50950164 -44322487 + RSINE1 SINE B4 13 131 -34 6 973 3919 101 45 3 chr17 50950652 50951117 -44321534 + Lx LINE L1 6047 6518 -136 6 973 207 0 0 0 chr17 50951117 50951140 -44321511 + (TGGG)n Simple_repeat Simple_repeat 3 25 0 6 973 3919 101 45 3 chr17 50951140 50951253 -44321398 + Lx LINE L1 6519 6647 -7 6 973 1090 64 7 0 chr17 50951261 50951402 -44321249 + B1_Mus1 SINE Alu 1 142 -6 6 973 227 229 0 67 chr17 50951409 50951484 -44321167 + A-rich Low_complexity Low_complexity 1 70 0 6 973 412 269 65 56 chr17 50952635 50952912 -44319739 - L1_Mur3 LINE L1 -480 5817 5541 6 973 378 0 0 0 chr17 50955305 50955347 -44317304 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 973 587 156 77 56 chr17 50955370 50955513 -44317138 - URR1A DNA MER1_type 0 226 81 6 973 459 0 0 0 chr17 50957209 50957260 -44315391 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 973 320 59 20 0 chr17 50958102 50958153 -44314498 + (CAAAAA)n Simple_repeat Simple_repeat 2 53 0 6 973 558 0 0 0 chr17 50958530 50958592 -44314059 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 973 420 117 308 51 chr17 50960025 50960142 -44312509 - B2_Mm2 SINE B2 0 195 49 6 973 1182 92 23 6 chr17 50960191 50960365 -44312286 - B2_Mm1t SINE B2 -15 178 2 6 973 213 206 33 0 chr17 50960813 50960905 -44311746 + (TA)n Simple_repeat Simple_repeat 1 95 0 6 973 1435 208 141 10 chr17 50960916 50961334 -44311317 - Lx9 LINE L1 -18 7626 7154 6 973 220 146 24 0 chr17 50962233 50962274 -44310377 + CT-rich Low_complexity Low_complexity 2 43 0 6 973 229 316 141 48 chr17 50962412 50962661 -44309990 - L2 LINE L2 -897 2522 2251 6 973 3119 111 47 0 chr17 50962697 50963183 -44309468 + L1_Mm LINE L1 5274 5782 -101 6 973 2944 112 15 22 chr17 50963203 50963661 -44308990 + Lx LINE L1 6199 6653 -1 6 973 1143 88 0 0 chr17 50963666 50963813 -44308838 + B1_Mus1 SINE Alu 2 148 0 6 973 618 255 14 7 chr17 50964727 50964873 -44307778 - B1_Mur1 SINE Alu 0 149 3 6 973 3642 108 14 18 chr17 50964873 50965430 -44307221 - RMER2 LTR ERV1 -12 555 1 6 973 301 211 43 32 chr17 50965956 50966049 -44306602 + MT2A LTR ERVL 389 482 -51 6 973 230 182 0 83 chr17 50966022 50966082 -44306569 + RMER20A LTR ERVK 462 516 0 6 973 492 278 157 25 chr17 50966151 50966646 -44306005 - L1M4 LINE L1 -359 5821 5266 6 973 1000 130 7 0 chr17 50966669 50966815 -44305836 - B1_Mus1 SINE Alu 0 148 2 6 973 440 277 134 26 chr17 50966985 50967411 -44305240 - L1M4 LINE L1 -1057 5089 4618 6 973 570 286 130 57 chr17 50967855 50968256 -44304395 + Charlie4a DNA MER1_type 16 445 -63 6 973 1609 205 34 54 chr17 50968580 50969084 -44303567 + L1_Rod LINE L1 3098 3591 -2256 6 973 12846 121 18 25 chr17 50969088 50972014 -44300637 + L1VL4 LINE L1 750 3677 -2469 6 973 6911 110 19 13 chr17 50972013 50973963 -44298688 + L1_Mus4 LINE L1 4672 6635 -1 6 973 5791 203 64 44 chr17 50973967 50975806 -44296845 + L1_Rod LINE L1 3586 5460 -387 6 973 424 225 0 63 chr17 50979466 50979546 -44293105 + B1_Mur4 SINE Alu 61 140 -10 6 973 194 33 0 62 chr17 50979546 50979578 -44293073 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 6 973 424 225 0 63 chr17 50979578 50979592 -44293059 + B1_Mur4 SINE Alu 141 149 -1 6 973 228 331 113 27 chr17 50980169 50980355 -44292296 + L2a LINE L2 2973 3174 -252 6 973 22 35 0 0 chr17 50981391 50981420 -44291231 + AT_rich Low_complexity Low_complexity 1 29 0 6 973 342 0 0 0 chr17 50982090 50982128 -44290523 + (GA)n Simple_repeat Simple_repeat 1 38 0 6 973 402 74 0 0 chr17 50983258 50983312 -44289339 + (A)n Simple_repeat Simple_repeat 1 54 0 6 973 1003 277 58 14 chr17 50984096 50984455 -44288196 - Lx6 LINE L1 -91 7369 7045 6 973 1504 250 78 13 chr17 50984491 50985049 -44287602 - Lx6 LINE L1 -673 6377 5779 6 973 2599 258 89 64 chr17 50985871 50986665 -44285986 + L1_Mur3 LINE L1 1243 2054 -3826 6 121 3059 118 43 18 chr17 50986665 50987173 -44285478 + Lx LINE L1 6132 6652 -2 6 974 2599 258 89 64 chr17 50987173 50987875 -44284776 + L1_Mur3 LINE L1 2055 2776 -3104 6 974 531 132 12 0 chr17 50987894 50987977 -44284674 + MTD LTR MaLR 336 419 0 6 974 451 219 59 13 chr17 50988115 50988308 -44284343 + L1_Mur3 LINE L1 3128 3335 -2545 6 974 1112 62 14 7 chr17 50988308 50988454 -44284197 + B1_Mm SINE Alu 1 147 0 6 974 447 263 89 25 chr17 50988454 50988491 -44284160 + L1_Mur3 LINE L1 3336 3381 -2499 6 974 183 129 0 0 chr17 50988491 50988522 -44284129 + (TATG)n Simple_repeat Simple_repeat 2 32 0 6 974 447 263 89 25 chr17 50988522 50988617 -44284034 + L1_Mur3 LINE L1 3382 3475 -2405 6 974 3927 93 10 18 chr17 50988619 50989220 -44283431 + Lx3_Mus LINE L1 6349 6944 -65 6 974 560 286 4 4 chr17 50989228 50989463 -44283188 + L1_Mur1 LINE L1 3485 3719 -2167 6 974 533 198 99 0 chr17 50989465 50989586 -44283065 + L1_Mur3 LINE L1 4647 4779 -1101 6 974 291 301 61 97 chr17 50989704 50990145 -44282506 + Lx8 LINE L1 7030 7464 -9 6 974 959 67 90 0 chr17 50990177 50990311 -44282340 + B1_Mus2 SINE Alu 2 147 0 6 974 428 181 59 48 chr17 50991291 50991477 -44281174 - RMER17C LTR ERVK -132 278 91 6 974 510 17 0 0 chr17 50992489 50992548 -44280103 + (GA)n Simple_repeat Simple_repeat 1 59 0 6 974 251 339 15 30 chr17 50993731 50993865 -44278786 - MIRb SINE MIR -49 219 88 6 974 256 310 0 0 chr17 50994527 50994585 -44278066 - ID4_ SINE ID -3 80 23 6 974 207 0 0 0 chr17 50994620 50994643 -44278008 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 6 974 331 245 102 11 chr17 50994832 50994955 -44277696 - B1_Mur3 SINE Alu -5 142 10 6 974 554 96 0 12 chr17 50995325 50995409 -44277242 + ORR1B1 LTR MaLR 1 83 -311 6 974 683 230 81 0 chr17 50996037 50996185 -44276466 + B3A SINE B2 1 160 -38 6 974 518 318 37 75 chr17 50997142 50997329 -44275322 - B3A SINE B2 -5 193 14 6 974 1036 228 107 35 chr17 50997731 50998076 -44274575 + ORR1D2 LTR MaLR 1 370 0 7 974 510 86 0 0 chr17 50998340 50998421 -44274230 + (CA)n Simple_repeat Simple_repeat 1 81 0 7 974 308 224 0 0 chr17 50998422 50998489 -44274162 - Lx9 LINE L1 -179 7465 7399 7 974 459 331 7 13 chr17 50998601 50998754 -44273897 + RSINE1 SINE B4 2 153 -12 7 974 342 67 0 0 chr17 50998877 50998922 -44273729 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 7 974 358 244 144 35 chr17 50999362 50999536 -44273115 + L1MC1 LINE L1 5863 6055 -278 7 974 535 197 45 94 chr17 50999676 50999842 -44272809 + ORR1D1 LTR MaLR 1 163 -215 7 974 276 30 0 0 chr17 50999842 50999875 -44272776 + (TC)n Simple_repeat Simple_repeat 2 34 0 7 974 468 250 61 91 chr17 50999875 50999906 -44272745 + ORR1D1 LTR MaLR 164 192 -186 7 974 363 262 0 0 chr17 50999912 50999996 -44272655 + ORR1D1 LTR MaLR 301 384 0 7 974 342 332 124 11 chr17 51000240 51000426 -44272225 + L1MC1 LINE L1 6116 6322 -11 1 974 662 290 46 21 chr17 51000429 51000714 -44271937 + B4A SINE B4 1 292 0 2 974 492 259 0 33 chr17 51001632 51001752 -44270899 + PB1D10 SINE Alu 1 116 -1 3 974 507 45 0 0 chr17 51001897 51001963 -44270688 + (CA)n Simple_repeat Simple_repeat 1 66 0 4 974 319 300 40 0 chr17 51002219 51002319 -44270332 - MLT1C LTR MaLR -325 142 39 5 974 216 97 0 0 chr17 51002319 51002350 -44270301 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 6 974 3995 91 39 0 chr17 51003164 51003726 -44268925 + MT2B2 LTR ERVL 1 584 0 7 974 309 322 12 24 chr17 51004518 51004642 -44268009 - L2a LINE L2 -5 3421 3250 8 974 823 233 4 9 chr17 51004889 51005141 -44267510 + Lx8 LINE L1 5633 5915 -1558 9 974 3910 108 51 5 chr17 51005266 51005896 -44266755 + L1_Mur1 LINE L1 5151 5809 -77 1 974 309 82 0 0 chr17 51005896 51005945 -44266706 + (T)n Simple_repeat Simple_repeat 1 49 0 1 974 2370 128 96 5 chr17 51005945 51006352 -44266299 - RLTR11A LTR ERVK -84 444 1 1 974 480 273 56 56 chr17 51006507 51006740 -44265911 - RMER15 LTR ERVL -42 533 301 1 974 2219 94 65 24 chr17 51006903 51007315 -44265336 + Lx3_Mus LINE L1 5791 6219 -790 1 974 7123 55 29 7 chr17 51007346 51007424 -44265227 - L1Md_F2 LINE L1 -1 6581 6479 1 974 198 0 0 0 chr17 51007424 51007446 -44265205 + (CCCCCG)n Simple_repeat Simple_repeat 3 24 0 1 974 7123 55 29 7 chr17 51007446 51008329 -44264322 - L1Md_F2 LINE L1 -104 6478 5599 1 974 2123 76 0 0 chr17 51008330 51008621 -44264030 + L1_Mm LINE L1 4343 4633 -1250 1 974 7116 107 55 5 chr17 51009269 51009349 -44263302 + Lx3A LINE L1 5827 5906 -1075 1 974 258 32 0 0 chr17 51009349 51009380 -44263271 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 1 974 7116 107 55 5 chr17 51009380 51010395 -44262256 + Lx3A LINE L1 5907 6977 -4 1 974 3276 59 11 0 chr17 51010410 51010853 -44261798 - L1_Mus2 LINE L1 -412 6154 5707 2 974 3024 76 12 2 chr17 51010855 51011262 -44261389 + L1_Mus2 LINE L1 6154 6564 -2 2 974 204 182 0 0 chr17 51011283 51011327 -44261324 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 974 21 71 0 0 chr17 51014124 51014166 -44258485 + AT_rich Low_complexity Low_complexity 1 42 0 2 974 22 0 0 0 chr17 51015348 51015370 -44257281 + AT_rich Low_complexity Low_complexity 1 22 0 2 974 416 325 19 31 chr17 51016599 51016758 -44255893 - RSINE1 SINE B4 -6 159 3 2 974 699 180 39 0 chr17 51017734 51017862 -44254789 + B1_Mus2 SINE Alu 1 133 -14 2 974 576 0 0 0 chr17 51017863 51017927 -44254724 + (CAGAA)n Simple_repeat Simple_repeat 4 67 0 2 974 228 154 0 0 chr17 51017940 51017992 -44254659 + A-rich Low_complexity Low_complexity 1 52 0 2 974 897 315 97 26 chr17 51018582 51018692 -44253959 + Lx8 LINE L1 6328 6436 -1037 2 974 2665 99 35 2 chr17 51018692 51019098 -44253553 + Lx2 LINE L1 6578 6996 -1 2 974 897 315 97 26 chr17 51019098 51019521 -44253130 + Lx8 LINE L1 6437 6898 -575 2 974 197 119 24 0 chr17 51019524 51019566 -44253085 + (CAAAAA)n Simple_repeat Simple_repeat 4 46 0 3 974 7470 125 19 4 chr17 51019807 51021083 -44251568 + L1_Mm LINE L1 2650 3944 -1939 3 974 200 346 9 18 chr17 51021336 51021445 -44251206 - MER5A DNA MER1_type -66 123 16 3 974 297 128 0 0 chr17 51021644 51021691 -44250960 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 974 229 109 77 15 chr17 51021695 51021760 -44250891 + GA-rich Low_complexity Low_complexity 1 69 0 3 974 279 0 0 0 chr17 51021895 51021926 -44250725 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 3 974 1670 223 35 13 chr17 51022327 51022704 -44249947 - MTD LTR MaLR -34 385 1 3 974 279 0 0 0 chr17 51022705 51022736 -44249915 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 974 425 266 119 17 chr17 51022939 51023115 -44249536 - MER89 LTR ERV1 -1 558 365 3 974 479 106 0 0 chr17 51023622 51023688 -44248963 - B1_Mur3 SINE Alu -7 142 77 3 974 2677 212 32 21 chr17 51023689 51024252 -44248399 + RMER19C LTR ERVK 3 571 -40 4 974 413 203 0 0 chr17 51024256 51024330 -44248321 - B1_Mur4 SINE Alu -65 85 12 4 974 235 320 66 13 chr17 51024729 51024805 -44247846 - PB1D10 SINE Alu -8 109 30 4 974 3100 41 40 5 chr17 51024867 51025263 -44247388 + L1Md_F2 LINE L1 6173 6582 0 4 974 402 269 62 62 chr17 51025303 51025481 -44247170 + L1M5 LINE L1 5521 5698 -481 4 974 184 397 8 31 chr17 51025797 51025927 -44246724 - L2a LINE L2 0 3426 3300 4 974 241 366 32 8 chr17 51025952 51026076 -44246575 + L2 LINE L2 2715 2841 -578 4 974 218 341 82 41 chr17 51026501 51026721 -44245930 - L2a LINE L2 0 3426 3198 4 974 345 357 170 8 chr17 51027362 51027627 -44245024 - L2a LINE L2 -1023 2396 2089 4 974 284 319 104 92 chr17 51028045 51028218 -44244433 + B4A SINE B4 2 176 -116 4 974 387 0 0 0 chr17 51028442 51028485 -44244166 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 4 974 513 380 25 0 chr17 51028489 51028647 -44244004 - RSINE1 SINE B4 -2 163 2 5 974 518 335 34 51 chr17 51029185 51029421 -44243230 - B4A SINE B4 0 292 61 5 974 469 196 104 26 chr17 51029818 51029933 -44242718 - MTD LTR MaLR -295 124 1 5 974 230 369 38 19 chr17 51030320 51030425 -44242226 + PB1D9 SINE Alu 1 107 -13 5 974 463 288 13 82 chr17 51031288 51031615 -44241036 - RMER1C Other Other -519 823 215 5 974 1848 272 55 65 chr17 51031731 51032941 -44239710 - L1_Rod LINE L1 -1399 4744 3573 5 974 677 127 66 9 chr17 51032960 51033109 -44239542 - URR1B DNA MER1_type -42 183 1 5 974 236 292 26 39 chr17 51033737 51033890 -44238761 + L1_Rod LINE L1 1148 1298 -6310 5 974 308 131 0 14 chr17 51033966 51034036 -44238615 + (CAGA)n Simple_repeat Simple_repeat 2 70 0 5 974 3190 263 81 29 chr17 51034039 51035614 -44237037 + L1_Rod LINE L1 1442 3098 -2749 5 974 1038 267 63 36 chr17 51035596 51036120 -44236531 + L1_Rod LINE L1 3353 3890 -1957 5 974 619 277 51 22 chr17 51036206 51036479 -44236172 + L1_Rod LINE L1 4857 5137 -710 5 974 25 31 0 0 chr17 51036576 51036608 -44236043 + AT_rich Low_complexity Low_complexity 1 32 0 5 974 21 0 0 0 chr17 51036778 51036799 -44235852 + AT_rich Low_complexity Low_complexity 1 21 0 6 974 22 35 0 0 chr17 51038005 51038034 -44234617 + AT_rich Low_complexity Low_complexity 1 29 0 6 974 225 310 46 0 chr17 51038656 51038710 -44233941 - MIR SINE MIR -64 144 89 6 974 872 158 179 0 chr17 51038710 51038900 -44233751 - URR1B DNA MER1_type -1 224 1 6 974 225 310 46 0 chr17 51038900 51038932 -44233719 - MIR SINE MIR -120 88 55 6 974 3375 119 25 51 chr17 51039862 51040430 -44232221 + Lx3C LINE L1 6421 6973 -3 6 974 214 162 0 0 chr17 51040435 51040472 -44232179 + (TAG)n Simple_repeat Simple_repeat 3 39 0 6 974 929 257 9 19 chr17 51040520 51040730 -44231921 - B3 SINE B2 -7 209 2 6 974 627 271 228 8 chr17 51041864 51042110 -44230541 - MTE2b LTR MaLR -79 300 1 6 974 238 250 19 0 chr17 51042202 51042254 -44230397 - BC1_Mm scRNA scRNA -88 64 12 6 974 375 280 16 115 chr17 51042511 51042693 -44229958 + RSINE1 SINE B4 2 165 0 6 974 23 33 0 0 chr17 51042790 51042820 -44229831 + AT_rich Low_complexity Low_complexity 1 30 0 7 974 26 30 0 0 chr17 51044638 51044671 -44227980 + AT_rich Low_complexity Low_complexity 1 33 0 7 974 215 227 0 0 chr17 51045167 51045211 -44227440 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 974 186 107 0 51 chr17 51045996 51046055 -44226596 + A-rich Low_complexity Low_complexity 3 58 0 7 974 409 229 18 45 chr17 51046492 51046602 -44226049 - RSINE1 SINE B4 -56 109 3 7 974 24 77 0 0 chr17 51047151 51047203 -44225448 + AT_rich Low_complexity Low_complexity 1 52 0 7 974 252 326 56 0 chr17 51048928 51049017 -44223634 - MARNA DNA Mariner -375 211 118 7 974 25 65 0 0 chr17 51049067 51049113 -44223538 + AT_rich Low_complexity Low_complexity 1 46 0 7 974 6204 77 12 7 chr17 51049389 51050227 -44222424 + Lx3_Mus LINE L1 6168 7009 0 7 974 358 262 130 76 chr17 51050844 51051067 -44221584 + Lx8 LINE L1 7105 7339 -134 7 974 617 100 150 0 chr17 51051121 51051241 -44221410 + Lx2B LINE L1 6553 6690 -310 8 974 1989 67 0 0 chr17 51053376 51053630 -44219021 + L1_Mus1 LINE L1 6314 6567 0 8 974 1353 206 69 24 chr17 51053728 51054294 -44218357 + RMER6D LTR ERVK 1 690 0 8 974 3671 155 53 29 chr17 51054451 51054834 -44217817 + L1VL4 LINE L1 221 586 -5716 8 974 1055 99 0 0 chr17 51054834 51054986 -44217665 + L1_Mus2 LINE L1 6402 6553 -13 8 974 387 0 0 0 chr17 51054986 51055029 -44217622 + (TAA)n Simple_repeat Simple_repeat 3 45 0 8 974 4595 107 43 8 chr17 51055029 51056027 -44216624 + L1VL4 LINE L1 587 1646 -1913 8 974 189 0 0 0 chr17 51056027 51056048 -44216603 + (T)n Simple_repeat Simple_repeat 1 21 0 8 974 523 100 0 0 chr17 51056296 51056366 -44216285 - U4 snRNA snRNA -75 70 1 8 974 3151 57 0 10 chr17 51056381 51056786 -44215865 + L1_Mus1 LINE L1 6163 6563 -4 8 974 480 248 11 0 chr17 51058035 51058148 -44214503 + PB1D9 SINE Alu 1 120 0 8 974 27 73 0 0 chr17 51058195 51058250 -44214401 + AT_rich Low_complexity Low_complexity 1 55 0 9 974 345 47 0 0 chr17 51061272 51061315 -44211336 + (TG)n Simple_repeat Simple_repeat 1 43 0 9 974 417 66 0 0 chr17 51061315 51061376 -44211275 + (GA)n Simple_repeat Simple_repeat 2 62 0 9 974 347 335 74 12 chr17 51061403 51061566 -44211085 - B4A SINE B4 -18 274 102 9 974 26 0 0 0 chr17 51061672 51061698 -44210953 + AT_rich Low_complexity Low_complexity 1 26 0 9 974 1246 251 31 10 chr17 51062066 51062360 -44210291 + MTD LTR MaLR 1 300 -119 9 974 1046 163 70 12 chr17 51062363 51062605 -44210046 + Lx2A1 LINE L1 6751 7006 -2 9 974 1462 320 75 47 chr17 51062893 51064123 -44208528 + Lx9 LINE L1 6363 7626 -18 9 974 24 91 0 0 chr17 51064167 51064233 -44208418 + AT_rich Low_complexity Low_complexity 1 66 0 9 974 819 288 62 25 chr17 51064574 51064816 -44207835 + B4A SINE B4 3 253 -39 9 974 672 317 70 4 chr17 51064934 51065178 -44207473 + MER2 DNA MER2_type 86 345 0 1 974 215 280 37 29 chr17 51065216 51065240 -44207411 + (TATG)n Simple_repeat Simple_repeat 3 26 0 1 974 387 89 0 0 chr17 51065240 51065296 -44207355 + (TCTA)n Simple_repeat Simple_repeat 1 56 0 1 974 215 280 37 29 chr17 51065296 51065407 -44207244 + (TATG)n Simple_repeat Simple_repeat 2 114 0 1 974 701 263 87 31 chr17 51065525 51065721 -44206930 - B3 SINE B2 -7 209 3 1 974 664 286 79 6 chr17 51065781 51065946 -44206705 - B3 SINE B2 -6 210 34 1 974 33822 35 0 0 chr17 51066156 51071523 -44201128 + L1Md_T LINE L1 126 5589 -297 1 974 9043 5 0 0 chr17 51071523 51072519 -44200132 + L1Md_T LINE L1 5590 6585 0 1 974 390 268 31 31 chr17 51073360 51073522 -44199129 + L1_Mur3 LINE L1 4443 4632 -1508 1 974 4767 54 2 10 chr17 51075235 51075837 -44196814 + L1Md_F2 LINE L1 5974 6570 -12 1 974 235 321 37 12 chr17 51075838 51075920 -44196731 - PB1D10 SINE Alu -31 86 3 1 974 228 35 0 0 chr17 51075927 51075956 -44196695 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 974 5682 93 20 6 chr17 51076563 51077756 -44194895 - Lx3_Mus LINE L1 -779 6230 5027 1 974 342 0 0 0 chr17 51077764 51077802 -44194849 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 974 6012 108 39 2 chr17 51077815 51079057 -44193594 - L1Md_F3 LINE L1 -59 6577 5288 1 974 1613 92 29 0 chr17 51079316 51079554 -44193097 - L1_Mus3 LINE L1 -4 6634 6390 1 974 10028 53 2 3 chr17 51079562 51081658 -44190993 - L1Md_F3 LINE L1 0 6584 4567 1 974 1613 76 15 8 chr17 51081642 51081907 -44190744 - MusHAL1 LINE L1 -592 2120 1854 1 974 516 289 133 33 chr17 51084575 51085015 -44187636 + L1M3 LINE L1 4552 5042 -1101 1 974 353 169 56 0 chr17 51085019 51085108 -44187543 + L1Md_F2 LINE L1 6489 6582 0 1 974 7000 80 2 7 chr17 51085155 51086242 -44186409 + L1_Mus1 LINE L1 5487 6567 0 1 974 238 259 47 0 chr17 51086346 51086431 -44186220 + L1M3 LINE L1 5158 5246 -894 1 974 435 276 52 0 chr17 51086767 51086941 -44185710 + L1MA7 LINE L1 5783 5965 -326 1 974 23 0 0 0 chr17 51086990 51087013 -44185638 + AT_rich Low_complexity Low_complexity 1 23 0 1 974 720 275 49 54 chr17 51087018 51087222 -44185429 - B3A SINE B2 -13 203 1 1 974 186 133 0 0 chr17 51087275 51087305 -44185346 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 1 974 1011 64 48 35 chr17 51087315 51087460 -44185191 - B1_Mus2 SINE Alu 0 147 1 1 974 401 286 45 0 chr17 51087460 51087572 -44185079 + RCHARR1 DNA MER1_type 80 196 -778 1 974 243 0 0 0 chr17 51087620 51087647 -44185004 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 1 974 2312 124 0 0 chr17 51087653 51088001 -44184650 + Lx3B LINE L1 6192 6539 -434 1 974 1035 149 274 6 chr17 51088000 51088242 -44184409 + Lx3B LINE L1 6686 7009 0 1 974 845 175 6 0 chr17 51088250 51088416 -44184235 + GA-rich Low_complexity Low_complexity 2 168 0 1 974 551 365 68 38 chr17 51089023 51089524 -44183127 + MLT1F-int LTR MaLR 81 596 -893 1 974 279 169 0 0 chr17 51089560 51089631 -44183020 + A-rich Low_complexity Low_complexity 1 71 0 1 974 4790 73 16 3 chr17 51090238 51090873 -44181778 + L1Md_F2 LINE L1 5926 6568 -14 1 974 30 0 0 0 chr17 51090873 51090903 -44181748 + AT_rich Low_complexity Low_complexity 1 30 0 1 974 1358 241 6 9 chr17 51090912 51091256 -44181395 + Lx6 LINE L1 5538 5880 0 1 974 492 278 143 65 chr17 51091285 51091691 -44180960 + RLTR12B LTR ERVK 11 460 -68 1 974 1102 50 0 0 chr17 51091686 51091825 -44180826 + B1_Mus2 SINE Alu 9 147 0 1 974 21 0 0 0 chr17 51091834 51091855 -44180796 + AT_rich Low_complexity Low_complexity 1 21 0 1 974 2668 214 100 19 chr17 51091903 51092621 -44180030 + Lx6 LINE L1 5898 6673 -787 1 974 812 124 6 18 chr17 51092653 51092817 -44179834 + Lx3_Mus LINE L1 6848 7009 0 1 974 2420 225 105 23 chr17 51092819 51093098 -44179553 + Lx6 LINE L1 6722 7026 -434 1 974 207 0 0 0 chr17 51093098 51093121 -44179530 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 974 2420 225 105 23 chr17 51093121 51093524 -44179127 + Lx6 LINE L1 7027 7460 0 1 974 185 320 93 0 chr17 51093590 51093665 -44178986 + MIRm SINE MIR 141 222 -54 1 974 258 56 0 0 chr17 51093685 51093721 -44178930 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 974 22 0 0 0 chr17 51094073 51094095 -44178556 + AT_rich Low_complexity Low_complexity 1 22 0 1 974 27 81 0 0 chr17 51094377 51094439 -44178212 + AT_rich Low_complexity Low_complexity 1 62 0 1 974 22 56 0 0 chr17 51094552 51094588 -44178063 + AT_rich Low_complexity Low_complexity 1 36 0 1 974 200 224 0 17 chr17 51095606 51095665 -44176986 + A-rich Low_complexity Low_complexity 4 61 0 1 974 290 358 71 46 chr17 51096682 51097033 -44175618 + L2a LINE L2 2943 3302 -124 1 974 384 292 85 0 chr17 51097231 51097361 -44175290 + B1_Mur2 SINE Alu 1 141 -8 1 974 439 288 0 9 chr17 51097514 51097619 -44175032 - PB1D9 SINE Alu -1 119 16 1 974 218 217 0 0 chr17 51097778 51097824 -44174827 + A-rich Low_complexity Low_complexity 1 46 0 1 974 318 62 0 40 chr17 51098424 51098474 -44174177 + (GAA)n Simple_repeat Simple_repeat 1 48 0 1 974 974 121 6 0 chr17 51098475 51098632 -44174019 + (GGA)n Simple_repeat Simple_repeat 2 159 0 1 974 1118 22 5 48 chr17 51098632 51098819 -44173832 + (GAA)n Simple_repeat Simple_repeat 2 180 0 1 974 611 119 5 64 chr17 51098819 51098977 -44173674 + GA-rich Low_complexity Low_complexity 30 177 0 1 974 1170 92 1 4 chr17 51098984 51099737 -44172914 + (GGA)n Simple_repeat Simple_repeat 1 750 0 1 974 1059 99 0 0 chr17 51099755 51100110 -44172541 + (GGA)n Simple_repeat Simple_repeat 1 355 0 1 974 1241 102 23 0 chr17 51100762 51100938 -44171713 - B2_Mm2 SINE B2 -14 181 2 1 974 946 204 18 32 chr17 51101389 51101607 -44171044 - RLTR18 LTR ERVK -379 237 23 1 974 580 250 45 79 chr17 51101656 51101808 -44170843 + B2_Mm2 SINE B2 1 146 -49 1 974 351 0 0 0 chr17 51101808 51101847 -44170804 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 974 580 250 45 79 chr17 51101847 51101872 -44170779 + B2_Mm2 SINE B2 147 172 -23 1 974 252 0 0 0 chr17 51101978 51102006 -44170645 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 974 663 306 15 25 chr17 51102059 51102263 -44170388 + RLTR18B LTR ERVK 306 507 -5 1 974 408 273 28 21 chr17 51102292 51102434 -44170217 + RLTR18-int LTR ERVK 3 145 -5216 1 974 23 0 0 0 chr17 51103224 51103247 -44169404 + AT_rich Low_complexity Low_complexity 1 23 0 1 974 1688 83 36 4 chr17 51103412 51103665 -44168986 + Lx3_Mus LINE L1 6741 7001 -8 1 974 192 91 0 0 chr17 51103671 51103685 -44168966 + (A)n Simple_repeat Simple_repeat 1 14 0 1 974 1222 41 0 0 chr17 51103685 51103832 -44168819 + B1_Mm SINE Alu 1 147 0 1 974 192 91 0 0 chr17 51103832 51103850 -44168801 + (A)n Simple_repeat Simple_repeat 1 18 0 1 974 473 276 75 0 chr17 51103857 51103991 -44168660 + B1_Mur1 SINE Alu 5 148 -1 1 974 1202 54 7 0 chr17 51104367 51104514 -44168137 + B1_Mus1 SINE Alu 1 148 0 1 974 186 71 0 0 chr17 51104520 51104548 -44168103 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 1 974 468 0 0 0 chr17 51104586 51104638 -44168013 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 974 782 315 103 4 chr17 51105204 51105465 -44167186 + B4A SINE B4 4 290 -2 1 974 198 0 0 0 chr17 51105469 51105491 -44167160 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 974 603 302 64 0 chr17 51105657 51105859 -44166792 + B3 SINE B2 1 215 -1 1 974 914 243 16 29 chr17 51108781 51108942 -44163709 + Lx8 LINE L1 7063 7223 -250 1 974 1215 235 174 61 chr17 51108942 51109481 -44163170 + MT2B LTR ERVL 2 601 0 1 974 914 243 16 29 chr17 51109481 51109565 -44163086 + Lx8 LINE L1 7224 7305 -168 1 974 22 0 0 0 chr17 51111226 51111248 -44161403 + AT_rich Low_complexity Low_complexity 1 22 0 1 974 547 315 59 31 chr17 51111299 51111620 -44161031 - Lx9 LINE L1 -222 7422 7093 1 974 581 236 109 8 chr17 51112022 51112150 -44160501 - B1_Mur1 SINE Alu 0 149 9 1 974 236 148 0 16 chr17 51112443 51112505 -44160146 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 974 251 284 136 41 chr17 51112516 51112663 -44159988 - Lx7 LINE L1 -361 7335 7175 1 974 15985 132 16 12 chr17 51114112 51117634 -44155017 - L1_Mus4 LINE L1 0 6636 3102 1 974 180 111 0 0 chr17 51117644 51117671 -44154980 + (GGA)n Simple_repeat Simple_repeat 2 28 0 1 975 642 234 0 21 chr17 51118743 51118887 -44153764 - B1_Mur2 SINE Alu -7 142 2 1 975 545 266 0 0 chr17 51120926 51121069 -44151582 + B1_Mur3 SINE Alu 1 143 -6 1 975 261 0 0 0 chr17 51121069 51121098 -44151553 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 975 589 266 0 8 chr17 51121907 51122061 -44150590 + B1_Mur1 SINE Alu 1 150 0 1 975 22 0 0 0 chr17 51122490 51122512 -44150139 + AT_rich Low_complexity Low_complexity 1 22 0 1 975 2873 73 7 12 chr17 51125355 51125782 -44146869 + MusHAL1 LINE L1 306 730 -2624 1 975 701 75 38 0 chr17 51125779 51125885 -44146766 + MusHAL1 LINE L1 2230 2339 -1014 1 975 1794 111 22 2 chr17 51125853 51126139 -44146512 + Lx LINE L1 5651 5942 -355 1 975 450 0 0 0 chr17 51127070 51127120 -44145531 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 975 261 57 0 0 chr17 51127923 51127958 -44144693 + (TTA)n Simple_repeat Simple_repeat 1 35 0 1 975 1645 206 37 37 chr17 51127999 51128378 -44144273 + Lx6 LINE L1 6228 6606 -854 1 975 2233 235 58 35 chr17 51128361 51128925 -44143726 + Lx6 LINE L1 6880 7456 -4 1 975 22 35 0 0 chr17 51129685 51129714 -44142937 + AT_rich Low_complexity Low_complexity 1 29 0 1 975 532 159 64 18 chr17 51129875 51129984 -44142667 - B1_Mus2 SINE Alu 0 147 34 1 975 537 373 46 50 chr17 51130006 51130288 -44142363 + B4A SINE B4 11 291 -1 1 975 38 22 0 0 chr17 51131779 51131824 -44140827 + AT_rich Low_complexity Low_complexity 1 45 0 1 975 334 342 99 61 chr17 51132616 51133040 -44139611 + RLTR14-int LTR ERV1 10 449 -4868 1 975 331 208 97 0 chr17 51133647 51133719 -44138932 + RLTR14-int LTR ERV1 821 899 -4418 1 975 248 333 26 0 chr17 51134291 51134369 -44138282 + PB1D10 SINE Alu 38 117 0 1 975 184 247 62 88 chr17 51135445 51135525 -44137126 + L3 LINE CR1 907 984 -3505 1 975 1768 281 127 41 chr17 51135850 51137060 -44135591 + L1_Mur3 LINE L1 2868 4181 -1699 1 975 919 216 13 63 chr17 51137318 51137555 -44135096 - URR1B DNA MER1_type 0 225 1 1 975 3855 128 52 19 chr17 51138275 51138935 -44133716 + Lx3_Mus LINE L1 6345 6990 -10 1 975 751 21 21 0 chr17 51138935 51139032 -44133619 + (GA)n Simple_repeat Simple_repeat 1 99 0 2 975 1404 296 134 11 chr17 51139578 51140100 -44132551 - RMER1C Other Other -170 1172 587 2 975 274 329 26 71 chr17 51140108 51140132 -44132519 + B4A SINE B4 78 224 -68 2 975 559 254 31 0 chr17 51140132 51140262 -44132389 + B1_Mur3 SINE Alu 14 147 -2 2 975 555 170 18 28 chr17 51140588 51140697 -44131954 - B1_Mur2 SINE Alu -1 148 41 2 975 2131 38 0 8 chr17 51140909 51141173 -44131478 + L1Md_F2 LINE L1 6307 6568 -14 2 975 22 35 0 0 chr17 51141176 51141205 -44131446 + AT_rich Low_complexity Low_complexity 1 29 0 2 975 403 264 38 60 chr17 51141234 51141367 -44131284 - Tigger7 DNA MER2_type -1945 546 417 2 975 659 289 19 19 chr17 51141431 51141593 -44131058 - B3 SINE B2 -53 163 2 2 975 560 342 121 12 chr17 51141666 51141906 -44130745 - Tigger7 DNA MER2_type -2224 267 2 2 975 326 23 23 0 chr17 51142501 51142544 -44130107 + (CAA)n Simple_repeat Simple_repeat 2 45 0 2 975 305 243 14 0 chr17 51143214 51143284 -44129367 + CT-rich Low_complexity Low_complexity 3 73 0 2 975 330 87 0 0 chr17 51143285 51143331 -44129320 + (TCC)n Simple_repeat Simple_repeat 1 46 0 2 975 1214 249 34 0 chr17 51144505 51144774 -44127877 + ORR1B1 LTR MaLR 3 280 -114 2 975 238 270 16 0 chr17 51145011 51145074 -44127577 - RLTR19C LTR ERVK -409 97 34 2 975 331 313 107 66 chr17 51145102 51145345 -44127306 + HAL1 LINE L1 1352 1604 -903 2 975 207 0 0 0 chr17 51145379 51145402 -44127249 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2 975 1035 123 0 0 chr17 51145409 51145572 -44127079 + (GAAA)n Simple_repeat Simple_repeat 2 164 0 2 975 501 169 0 0 chr17 51145580 51145663 -44126988 + ORR1B1 LTR MaLR 275 357 -10 2 975 480 317 0 33 chr17 51145894 51146044 -44126607 + RSINE1 SINE B4 2 146 -19 2 975 320 263 61 87 chr17 51146127 51146323 -44126328 + L1MD LINE L1 4942 5132 -1014 2 975 180 0 0 0 chr17 51146358 51146378 -44126273 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2 975 189 147 0 0 chr17 51147031 51147065 -44125586 + (TATG)n Simple_repeat Simple_repeat 3 36 0 2 975 3673 70 23 98 chr17 51147109 51147344 -44125307 - L1_Mus4 LINE L1 -3 6633 6454 2 975 1169 55 7 0 chr17 51147344 51147490 -44125161 - B1_Mm SINE Alu 0 147 1 2 975 3673 70 23 98 chr17 51147490 51147856 -44124795 - L1_Mus4 LINE L1 -183 6453 6077 2 975 3618 76 16 0 chr17 51147857 51148424 -44124227 + L1_Mus4 LINE L1 5493 6068 -568 2 975 217 231 0 0 chr17 51148584 51148623 -44124028 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 975 433 280 96 48 chr17 51148626 51149043 -44123608 - L1M2 LINE L1 -1487 4656 4220 2 975 1142 246 53 25 chr17 51149047 51149402 -44123249 - ORR1D2 LTR MaLR -3 367 3 2 975 431 282 34 27 chr17 51149598 51149744 -44122907 + RMER30 DNA MER1_type 14 160 -42 2 975 663 257 29 0 chr17 51149822 51149962 -44122689 - B1_Mur2 SINE Alu -4 145 2 2 975 294 215 176 90 chr17 51149973 51150218 -44122433 - L1M2 LINE L1 -2133 4010 3745 2 975 439 60 0 29 chr17 51150307 51150376 -44122275 + (TA)n Simple_repeat Simple_repeat 1 67 0 2 975 508 158 0 59 chr17 51150589 51150690 -44121961 - B1_Mus2 SINE Alu -7 140 46 2 975 225 266 126 18 chr17 51150735 51150846 -44121805 - L1M2 LINE L1 -2576 3564 3442 2 975 22 0 0 0 chr17 51150915 51150937 -44121714 + AT_rich Low_complexity Low_complexity 1 22 0 2 975 1138 102 11 6 chr17 51150956 51151133 -44121518 - Lx3_Mus LINE L1 -78 6931 6754 2 975 230 329 0 86 chr17 51151179 51151272 -44121379 - ID_B1 SINE B4 -42 182 98 2 975 455 239 0 0 chr17 51151193 51151285 -44121366 - B1_Mur4 SINE Alu -54 96 5 2 975 25 0 0 0 chr17 51151295 51151320 -44121331 + AT_rich Low_complexity Low_complexity 1 25 0 2 975 426 395 18 11 chr17 51152051 51152335 -44120316 + B4A SINE B4 7 292 0 2 975 26 30 0 0 chr17 51153585 51153618 -44119033 + AT_rich Low_complexity Low_complexity 1 33 0 2 975 25 65 0 0 chr17 51153764 51153810 -44118841 + AT_rich Low_complexity Low_complexity 1 46 0 2 975 23 0 0 0 chr17 51153830 51153853 -44118798 + AT_rich Low_complexity Low_complexity 1 23 0 2 975 666 0 0 0 chr17 51154357 51154431 -44118220 + (GGAAA)n Simple_repeat Simple_repeat 4 77 0 2 975 471 273 106 14 chr17 51154475 51154750 -44117901 + L1M4 LINE L1 3302 3601 -2545 2 975 316 261 60 54 chr17 51154903 51155069 -44117582 + L1M4 LINE L1 3864 4030 -2116 2 975 483 210 182 16 chr17 51155184 51155310 -44117341 - B1_Mur3 SINE Alu -1 148 2 2 975 255 305 119 66 chr17 51155310 51155333 -44117318 - ID_B1 SINE B4 -1 221 65 2 975 200 31 62 0 chr17 51155373 51155405 -44117246 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 975 316 274 129 12 chr17 51155406 51155576 -44117075 + L1M4 LINE L1 4104 4293 -1853 2 975 394 330 130 37 chr17 51156127 51156505 -44116146 - L1MC LINE L1 -924 5222 4810 2 975 556 292 0 0 chr17 51156832 51156962 -44115689 + B1_Mur1 SINE Alu 18 147 -2 2 975 35 41 0 0 chr17 51156962 51157011 -44115640 + AT_rich Low_complexity Low_complexity 1 49 0 2 975 21 0 0 0 chr17 51157045 51157066 -44115585 + AT_rich Low_complexity Low_complexity 1 21 0 2 975 592 312 12 12 chr17 51157501 51157663 -44114988 + B3A SINE B2 33 194 -4 2 975 2481 149 51 30 chr17 51157774 51157931 -44114720 + RLTR31B_Mm LTR ERVK 1 154 -403 2 975 963 113 28 0 chr17 51157931 51158073 -44114578 + B1_Mus1 SINE Alu 1 146 -2 2 975 237 33 0 0 chr17 51158075 51158105 -44114546 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 2 975 2481 149 51 30 chr17 51158105 51158415 -44114236 + RLTR31B_Mm LTR ERVK 155 481 -76 2 975 502 254 142 53 chr17 51159937 51160162 -44112489 - Lx8 LINE L1 -1099 6374 6130 2 975 353 283 46 86 chr17 51160217 51160368 -44112283 - Lx8 LINE L1 -1481 5992 5848 2 975 407 283 128 25 chr17 51160457 51160660 -44111991 + Lx8 LINE L1 7214 7437 -36 2 975 23 0 0 0 chr17 51160673 51160696 -44111955 + AT_rich Low_complexity Low_complexity 1 23 0 2 975 31 68 0 0 chr17 51160754 51160813 -44111838 + AT_rich Low_complexity Low_complexity 1 59 0 2 975 521 252 6 70 chr17 51160843 51161001 -44111650 + B1_Mur1 SINE Alu 1 148 -1 2 975 411 257 18 122 chr17 51161351 51161515 -44111136 - B1_Mur4 SINE Alu -2 148 2 2 975 22 35 0 0 chr17 51164781 51164810 -44107841 + AT_rich Low_complexity Low_complexity 1 29 0 2 975 21 0 0 0 chr17 51164926 51164947 -44107704 + AT_rich Low_complexity Low_complexity 1 21 0 2 975 700 203 80 0 chr17 51165643 51165781 -44106870 + B1_Mur4 SINE Alu 2 150 0 2 975 279 316 53 0 chr17 51165783 51165897 -44106754 + MTC LTR MaLR 26 145 -276 2 975 1135 174 42 0 chr17 51166031 51166244 -44106407 + URR1A DNA MER1_type 5 226 0 2 975 30 0 0 0 chr17 51166826 51166856 -44105795 + AT_rich Low_complexity Low_complexity 1 30 0 2 975 1353 59 0 0 chr17 51167049 51167218 -44105433 + L1Md_F2 LINE L1 5418 5586 -297 2 975 7606 63 7 8 chr17 51167218 51168214 -44104437 + L1Md_F2 LINE L1 5587 6581 -1 2 975 1041 218 55 65 chr17 51170146 51170168 -44102483 - ORR1C1 LTR MaLR 0 367 350 2 975 817 115 123 0 chr17 51170168 51170298 -44102353 + B1_Mus2 SINE Alu 2 147 0 2 975 1203 194 167 36 chr17 51170298 51170499 -44102152 - ORR1C1 LTR MaLR -17 361 150 2 975 261 0 0 0 chr17 51170499 51170528 -44102123 + (CAGA)n Simple_repeat Simple_repeat 4 32 0 2 975 1203 193 171 35 chr17 51170528 51170648 -44102003 - ORR1C1 LTR MaLR -221 157 3 2 975 223 96 19 19 chr17 51170716 51170769 -44101882 + (CAAAAA)n Simple_repeat Simple_repeat 2 54 0 2 975 4016 217 92 54 chr17 51170868 51172035 -44100616 + Lx9 LINE L1 6426 7636 -8 2 975 209 33 33 0 chr17 51172213 51172243 -44100408 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 975 183 250 28 42 chr17 51172244 51172315 -44100336 - L3 LINE CR1 -1592 2897 2828 2 975 3125 78 16 2 chr17 51173118 51173545 -44099106 + Lx3_Mus LINE L1 6568 7001 -8 2 975 198 71 0 0 chr17 51173545 51173573 -44099078 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 2 975 543 96 0 0 chr17 51173642 51173725 -44098926 + (CA)n Simple_repeat Simple_repeat 2 84 0 2 975 208 143 0 0 chr17 51174234 51174269 -44098382 + (A)n Simple_repeat Simple_repeat 1 35 0 2 975 282 356 22 15 chr17 51174913 51175047 -44097604 - B1_Mur3 SINE Alu -13 136 2 2 975 206 170 43 0 chr17 51176235 51176282 -44096369 - MIRc SINE MIR -8 260 212 2 975 7578 69 14 5 chr17 51176857 51178178 -44094473 + L1_Mus2 LINE L1 5247 6566 0 2 975 3924 113 36 26 chr17 51178306 51178950 -44093701 + Lx3_Mus LINE L1 6352 7001 -8 2 975 592 237 21 16 chr17 51180509 51180698 -44091953 - Lx LINE L1 0 6654 6465 2 975 5091 84 17 16 chr17 51180701 51181471 -44091180 + L1_Mur1 LINE L1 3151 3921 -1965 2 975 1999 137 6 6 chr17 51181471 51181802 -44090849 + Lx3A LINE L1 6651 6981 0 2 975 23 78 0 0 chr17 51181803 51181854 -44090797 + AT_rich Low_complexity Low_complexity 1 51 0 2 975 313 153 28 0 chr17 51182125 51182197 -44090454 + (TA)n Simple_repeat Simple_repeat 2 75 0 2 975 1523 135 79 11 chr17 51182335 51182612 -44090039 + Lx LINE L1 6351 6646 -8 2 975 242 261 14 28 chr17 51183239 51183310 -44089341 + MLT1C LTR MaLR 303 372 -95 2 975 24 32 0 0 chr17 51184400 51184431 -44088220 + AT_rich Low_complexity Low_complexity 1 31 0 2 975 252 0 0 0 chr17 51187185 51187213 -44085438 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 975 198 0 0 0 chr17 51187663 51187685 -44084966 + (TC)n Simple_repeat Simple_repeat 1 22 0 2 975 602 122 9 0 chr17 51187685 51187791 -44084860 + (CA)n Simple_repeat Simple_repeat 1 108 0 2 975 402 21 0 0 chr17 51189250 51189297 -44083354 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 975 263 247 211 53 chr17 51189358 51189529 -44083122 + MER46C DNA MER2_type 83 280 -58 2 975 444 237 144 0 chr17 51189714 51189832 -44082819 - B1_Mur4 SINE Alu -15 135 1 2 975 2680 58 3 6 chr17 51189927 51190274 -44082377 + ORR1A1 LTR MaLR 1 346 0 2 975 206 243 64 18 chr17 51191263 51191372 -44081279 + (TTAAA)n Simple_repeat Simple_repeat 3 116 0 2 975 370 229 16 99 chr17 51191911 51192032 -44080619 + MT2B LTR ERVL 154 264 -337 2 975 1039 71 14 0 chr17 51191927 51192067 -44080584 + B1_Mus2 SINE Alu 6 147 0 2 975 460 116 76 95 chr17 51192085 51192190 -44080461 + B1_Mur1 SINE Alu 47 149 0 2 975 282 318 12 12 chr17 51192797 51192883 -44079768 + PB1D10 SINE Alu 24 109 -8 2 975 537 229 59 0 chr17 51192952 51193070 -44079581 - MTD LTR MaLR -15 404 280 3 975 6115 81 31 9 chr17 51193088 51193958 -44078693 + Lx3_Mus LINE L1 5587 6475 -534 3 975 272 189 94 62 chr17 51194167 51194263 -44078388 - Cheshire DNA MER1_type -2205 215 117 3 975 909 252 20 70 chr17 51194909 51195251 -44077400 + Lx9 LINE L1 4818 5142 -705 3 975 988 237 191 27 chr17 51195287 51195791 -44076860 + Lx9 LINE L1 5295 5928 -1716 3 975 1017 118 0 0 chr17 51195928 51196097 -44076554 + (CA)n Simple_repeat Simple_repeat 2 170 0 3 975 356 206 19 10 chr17 51196133 51196236 -44076415 + Lx9 LINE L1 7531 7634 -10 3 975 192 97 0 0 chr17 51196529 51196560 -44076091 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 975 31 0 0 0 chr17 51198073 51198104 -44074547 + AT_rich Low_complexity Low_complexity 1 31 0 3 975 415 188 0 0 chr17 51198119 51198204 -44074447 - Lx9 LINE L1 -25 7619 7535 3 975 402 39 0 0 chr17 51198207 51198259 -44074392 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 975 1537 220 57 3 chr17 51198263 51198578 -44074073 - Lx9 LINE L1 -263 7381 7050 3 975 7143 117 15 2 chr17 51198573 51199733 -44072918 + Lx LINE L1 5460 6634 -20 3 975 1406 208 60 40 chr17 51199740 51200110 -44072541 - Lx9 LINE L1 -566 7078 6702 3 975 26 50 0 0 chr17 51200134 51200174 -44072477 + AT_rich Low_complexity Low_complexity 1 40 0 3 975 288 0 0 0 chr17 51201731 51201763 -44070888 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 975 6128 63 6 9 chr17 51203006 51203808 -44068843 + L1_Mus2 LINE L1 5767 6566 0 3 975 639 257 66 35 chr17 51203924 51204122 -44068529 - B3 SINE B2 -11 205 2 3 975 29 0 0 0 chr17 51204263 51204292 -44068359 + AT_rich Low_complexity Low_complexity 1 29 0 3 975 254 303 67 73 chr17 51204313 51204477 -44068174 + RSINE1 SINE B4 3 165 0 3 975 220 320 0 37 chr17 51204482 51204563 -44068088 + (CA)n Simple_repeat Simple_repeat 1 78 0 3 975 26 0 0 0 chr17 51205212 51205238 -44067413 + AT_rich Low_complexity Low_complexity 1 26 0 3 975 249 264 0 0 chr17 51205520 51205592 -44067059 + (TA)n Simple_repeat Simple_repeat 1 72 0 3 975 1352 77 37 33 chr17 51205962 51206177 -44066474 + RLTR31_Mm LTR ERVK 132 347 -214 3 975 791 288 81 13 chr17 51206315 51206551 -44066100 - B4A SINE B4 -16 276 25 3 975 620 254 7 7 chr17 51206841 51206984 -44065667 + B1_Mur2 SINE Alu 2 144 -5 3 975 210 71 0 0 chr17 51206986 51207014 -44065637 + (GAAAA)n Simple_repeat Simple_repeat 5 32 0 3 975 353 177 0 12 chr17 51207011 51207091 -44065560 + GA-rich Low_complexity Low_complexity 4 82 0 3 975 311 259 42 33 chr17 51207181 51207301 -44065350 + Charlie22a DNA MER1_type 318 438 -53 3 975 271 249 0 184 chr17 51208009 51208226 -44064425 + (CACAC)n Simple_repeat Simple_repeat 3 179 0 3 975 435 246 186 23 chr17 51208438 51208658 -44063993 + Lx8 LINE L1 7208 7463 -10 3 975 27 29 0 0 chr17 51209313 51209347 -44063304 + AT_rich Low_complexity Low_complexity 1 34 0 3 975 533 262 102 28 chr17 51209443 51209620 -44063031 + B3A SINE B2 2 191 -7 3 975 238 299 148 11 chr17 51210079 51210167 -44062484 - PB1D9 SINE Alu -14 106 7 3 975 21 0 0 0 chr17 51211429 51211450 -44061201 + AT_rich Low_complexity Low_complexity 1 21 0 3 975 204 309 15 0 chr17 51211554 51211622 -44061029 + (CATATA)n Simple_repeat Simple_repeat 2 70 0 3 975 621 204 197 62 chr17 51212935 51213113 -44059538 - B3 SINE B2 -10 206 5 3 975 352 182 63 154 chr17 51213336 51213479 -44059172 + ORR1D2 LTR MaLR 241 370 0 3 975 266 246 111 42 chr17 51213589 51213661 -44058990 - ID2 SINE ID -2 81 5 3 975 26 64 0 0 chr17 51215116 51215163 -44057488 + AT_rich Low_complexity Low_complexity 1 47 0 3 975 210 37 0 0 chr17 51215324 51215351 -44057300 + (TTG)n Simple_repeat Simple_repeat 2 28 0 3 975 1072 95 0 7 chr17 51215356 51215504 -44057147 - B1_Mus1 SINE Alu 0 148 2 3 975 7456 103 15 20 chr17 51215736 51217473 -44055178 - L1Md_F2 LINE L1 -1 6581 4864 3 975 2479 153 36 7 chr17 51217469 51217911 -44054740 - L1VL4 LINE L1 -1652 4225 3771 3 975 8381 181 37 12 chr17 51217905 51218128 -44054523 - L1VL4 LINE L1 -2758 3128 2893 3 975 1553 53 0 0 chr17 51218128 51218318 -44054333 - B2_Mm1a SINE B2 -2 191 2 3 975 8381 186 44 12 chr17 51218318 51220259 -44052392 - L1VL4 LINE L1 -2994 2892 891 3 975 407 211 0 18 chr17 51220983 51221094 -44051557 + GA-rich Low_complexity Low_complexity 2 110 0 3 975 180 97 0 0 chr17 51222295 51222326 -44050325 + (TAAAA)n Simple_repeat Simple_repeat 2 32 0 3 975 590 244 75 69 chr17 51222385 51222432 -44050219 + L1_Rod LINE L1 1019 1065 -6543 3 975 7587 99 32 14 chr17 51222432 51223602 -44049049 + Lx3A LINE L1 5790 6981 0 3 975 590 259 70 49 chr17 51223602 51224040 -44048611 + L1_Rod LINE L1 1066 1520 -4327 3 975 2220 277 87 29 chr17 51224045 51225339 -44047312 + L1_Rod LINE L1 2117 3484 -2363 3 975 216 97 0 0 chr17 51225345 51225376 -44047275 + (AGGGGG)n Simple_repeat Simple_repeat 4 34 0 3 975 960 118 11 22 chr17 51225377 51225559 -44047092 + GA-rich Low_complexity Low_complexity 1 180 0 3 975 1852 312 133 27 chr17 51225559 51226115 -44046536 + Lx9 LINE L1 6333 6944 -700 3 975 468 0 0 0 chr17 51226115 51226167 -44046484 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 975 1852 312 133 27 chr17 51226167 51226795 -44045856 + Lx9 LINE L1 6945 7643 -1 3 975 219 280 55 99 chr17 51227957 51228048 -44044603 - PB1D9 SINE Alu -29 91 5 3 975 44 63 0 0 chr17 51228089 51228168 -44044483 + AT_rich Low_complexity Low_complexity 1 79 0 3 975 326 269 15 0 chr17 51228444 51228511 -44044140 + ID4 SINE ID 8 75 -8 3 975 283 146 0 40 chr17 51228469 51228519 -44044132 + tRNA-Val-GTA tRNA tRNA 29 76 0 3 975 221 317 202 0 chr17 51228539 51228643 -44044008 - MIRb SINE MIR -127 141 17 3 975 214 234 0 0 chr17 51229063 51229110 -44043541 + (CAGG)n Simple_repeat Simple_repeat 2 48 0 3 975 438 216 20 49 chr17 51229113 51229215 -44043436 + B1_Mur2 SINE Alu 40 138 -11 3 975 358 282 15 30 chr17 51229465 51229600 -44043051 - RMER30 DNA MER1_type -62 140 8 3 975 459 317 14 35 chr17 51229900 51230044 -44042607 + B4A SINE B4 56 196 -96 3 975 381 22 0 0 chr17 51230045 51230091 -44042560 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 975 2152 219 73 36 chr17 51230112 51230633 -44042018 + Lx9 LINE L1 6943 7482 -162 3 975 621 268 87 11 chr17 51231053 51231238 -44041413 + ORR1E LTR MaLR 5 203 -156 3 975 331 303 127 13 chr17 51231253 51231410 -44041241 + ORR1D2 LTR MaLR 149 323 -47 3 975 216 188 0 0 chr17 51231416 51231464 -44041187 + T-rich Low_complexity Low_complexity 1 48 0 3 975 411 324 43 22 chr17 51231978 51232117 -44040534 - MER5A1 DNA MER1_type 0 166 25 3 975 289 81 0 0 chr17 51236293 51236330 -44036321 - tRNA-Arg-AGA tRNA tRNA -2 74 38 3 975 209 30 61 0 chr17 51236540 51236573 -44036078 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 975 908 156 38 38 chr17 51237047 51237233 -44035418 + B2_Mm2 SINE B2 2 187 -8 3 975 24 0 0 0 chr17 51237448 51237472 -44035179 + AT_rich Low_complexity Low_complexity 1 24 0 3 975 287 389 56 51 chr17 51238224 51238438 -44034213 + MLT1E2 LTR MaLR 222 436 -191 3 975 21 36 0 0 chr17 51238819 51238847 -44033804 + AT_rich Low_complexity Low_complexity 1 28 0 3 975 861 251 25 0 chr17 51239784 51239987 -44032664 + B3 SINE B2 1 208 -8 3 975 22 0 0 0 chr17 51240882 51240904 -44031747 + AT_rich Low_complexity Low_complexity 1 22 0 3 975 924 209 103 50 chr17 51241558 51241800 -44030851 + Lx5 LINE L1 6796 7050 0 3 975 889 162 40 40 chr17 51241832 51242031 -44030620 - URR1B DNA MER1_type -24 201 3 3 975 1135 255 27 97 chr17 51242151 51242540 -44030111 + RMER19C LTR ERVK 6 297 -314 3 975 1088 8 0 8 chr17 51242540 51242670 -44029981 + (CCA)n Simple_repeat Simple_repeat 3 131 0 3 975 1135 317 47 123 chr17 51242670 51243014 -44029637 + RMER19C LTR ERVK 298 611 0 3 975 23 0 0 0 chr17 51243052 51243075 -44029576 + AT_rich Low_complexity Low_complexity 1 23 0 3 975 639 157 15 59 chr17 51243076 51243229 -44029422 - B1_Mur2 SINE Alu -6 143 3 3 975 263 279 48 119 chr17 51244483 51244676 -44027975 + RLTR42-int LTR ERVK 1645 1795 -3727 3 975 450 328 36 66 chr17 51245772 51245968 -44026683 + B4A SINE B4 4 193 -99 3 975 369 0 0 0 chr17 51245974 51246015 -44026636 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 975 219 369 90 0 chr17 51246335 51246446 -44026205 + MIRb SINE MIR 113 233 -35 3 975 22 88 0 0 chr17 51246899 51246956 -44025695 + AT_rich Low_complexity Low_complexity 1 57 0 3 975 473 243 70 17 chr17 51247288 51247460 -44025191 - L1MC4a LINE L1 -545 7337 7157 3 975 2782 182 88 65 chr17 51247464 51248264 -44024387 + RMER19B LTR ERVK 1 890 -12 3 975 275 104 21 0 chr17 51248581 51248629 -44024022 + (TCCA)n Simple_repeat Simple_repeat 2 50 0 3 976 22 35 0 0 chr17 51249896 51249925 -44022726 + AT_rich Low_complexity Low_complexity 1 29 0 3 976 1169 54 7 0 chr17 51249962 51250109 -44022542 + B1_Mus1 SINE Alu 1 148 0 3 976 24 53 0 0 chr17 51250294 51250332 -44022319 + AT_rich Low_complexity Low_complexity 1 38 0 3 976 604 265 112 36 chr17 51251355 51251733 -44020918 + MLT1B LTR MaLR 34 453 -14 3 976 201 389 73 17 chr17 51252076 51252254 -44020397 - L2a LINE L2 -272 3154 2967 3 976 752 293 96 0 chr17 51253503 51253752 -44018899 + B4A SINE B4 2 274 -18 3 976 435 19 0 0 chr17 51254612 51254664 -44017987 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 976 689 238 113 80 chr17 51254979 51255253 -44017398 - MTD LTR MaLR -11 408 126 3 976 385 274 101 50 chr17 51255264 51255383 -44017268 + L1MB5 LINE L1 5991 6118 -56 3 976 439 206 84 0 chr17 51255516 51255623 -44017028 + L1MC4a LINE L1 7463 7578 -304 3 976 192 40 0 0 chr17 51257251 51257276 -44015375 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 976 192 258 129 0 chr17 51257615 51257677 -44014974 - MER5B DNA MER1_type -24 154 85 3 976 390 74 0 0 chr17 51258118 51258172 -44014479 + (CATA)n Simple_repeat Simple_repeat 2 55 0 3 976 503 268 81 0 chr17 51260075 51260198 -44012453 - RSINE1 SINE B4 -29 136 4 3 976 456 114 35 17 chr17 51260198 51260314 -44012337 + (TAGA)n Simple_repeat Simple_repeat 1 118 0 4 976 28 29 0 0 chr17 51260530 51260565 -44012086 + AT_rich Low_complexity Low_complexity 1 35 0 4 976 22 56 0 0 chr17 51260685 51260721 -44011930 + AT_rich Low_complexity Low_complexity 1 36 0 4 976 600 269 0 27 chr17 51261117 51261266 -44011385 + B1_Mur1 SINE Alu 5 149 0 4 976 205 91 43 43 chr17 51261274 51261343 -44011308 + A-rich Low_complexity Low_complexity 2 70 0 4 976 738 53 0 0 chr17 51262187 51262282 -44010369 + (TC)n Simple_repeat Simple_repeat 1 95 0 4 976 41 48 0 0 chr17 51262432 51262494 -44010157 + AT_rich Low_complexity Low_complexity 1 62 0 4 976 1236 34 0 0 chr17 51262882 51263029 -44009622 - B1_Mus2 SINE Alu 0 147 1 4 976 298 147 101 14 chr17 51263574 51263643 -44009008 + PB1D7 SINE Alu 41 115 -5 4 976 602 101 0 70 chr17 51263731 51263859 -44008792 - Lx LINE L1 0 6654 6536 4 976 22 0 0 0 chr17 51263956 51263978 -44008673 + AT_rich Low_complexity Low_complexity 1 22 0 4 976 236 280 67 48 chr17 51264607 51264712 -44007939 - CR1_Mam LINE CR1 -518 1686 1580 4 976 291 306 9 26 chr17 51265998 51266112 -44006539 - BC1_Mm scRNA scRNA -39 113 2 4 976 25 31 0 0 chr17 51266218 51266250 -44006401 + AT_rich Low_complexity Low_complexity 1 32 0 4 976 23 33 0 0 chr17 51266360 51266390 -44006261 + AT_rich Low_complexity Low_complexity 1 30 0 4 976 273 344 24 24 chr17 51267138 51267263 -44005388 + MIRb SINE MIR 41 165 -103 4 976 251 317 57 28 chr17 51267265 51267299 -44005352 + ID_B1 SINE B4 59 199 -90 4 976 376 240 65 37 chr17 51267299 51267407 -44005244 + B1_Mus2 SINE Alu 8 118 -29 4 976 396 0 0 0 chr17 51267411 51267455 -44005196 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 4 976 375 187 19 9 chr17 51267460 51267568 -44005083 + GA-rich Low_complexity Low_complexity 3 111 0 4 976 185 175 122 24 chr17 51267875 51267916 -44004735 + L2b LINE L2 3322 3366 -9 4 976 180 0 0 0 chr17 51268541 51268561 -44004090 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 4 976 240 86 0 0 chr17 51269484 51269519 -44003132 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 4 976 23 33 0 0 chr17 51270569 51270599 -44002052 + AT_rich Low_complexity Low_complexity 1 30 0 4 976 1032 277 62 15 chr17 51270624 51270965 -44001686 - ORR1D2 LTR MaLR -12 358 2 4 976 216 191 0 0 chr17 51272171 51272218 -44000433 + A-rich Low_complexity Low_complexity 1 47 0 4 976 1461 198 111 51 chr17 51272306 51272657 -43999994 - ORR1D1 LTR MaLR 0 374 3 4 976 371 243 228 60 chr17 51272911 51273126 -43999525 - RMER15 LTR ERVL -15 560 310 4 976 235 282 11 34 chr17 51273667 51273755 -43998896 - MLT1A1 LTR MaLR -2 406 321 4 976 332 350 62 7 chr17 51273885 51274029 -43998622 - MLT1A1 LTR MaLR -256 152 1 4 976 296 102 0 20 chr17 51275325 51275375 -43997276 + (GGGA)n Simple_repeat Simple_repeat 4 52 0 4 976 882 129 0 0 chr17 51275745 51275885 -43996766 + (GGGA)n Simple_repeat Simple_repeat 4 143 0 4 976 1023 227 152 45 chr17 51275969 51276063 -43996588 + MTD LTR MaLR 3 123 -296 4 976 216 24 0 68 chr17 51276063 51276107 -43996544 + (ATG)n Simple_repeat Simple_repeat 1 41 0 4 976 1023 227 152 45 chr17 51276107 51276321 -43996330 + MTD LTR MaLR 124 343 -76 4 976 25 31 0 0 chr17 51276615 51276647 -43996004 + AT_rich Low_complexity Low_complexity 1 32 0 4 976 663 208 27 27 chr17 51276765 51276913 -43995738 + B1F2 SINE Alu 2 149 0 4 976 1700 105 27 8 chr17 51277224 51277484 -43995167 + Lx3A LINE L1 6717 6981 0 4 976 1274 263 88 3 chr17 51278078 51278440 -43994211 + Lx7 LINE L1 6916 7308 -388 4 976 220 194 47 31 chr17 51278459 51278523 -43994128 + T-rich Low_complexity Low_complexity 1 65 0 4 976 2431 165 130 78 chr17 51278850 51279506 -43993145 + RMER6C LTR ERVK 1 690 0 4 976 414 340 0 0 chr17 51280036 51280139 -43992512 + PB1D10 SINE Alu 6 108 -9 4 976 356 299 13 52 chr17 51280654 51280809 -43991842 + MIR SINE MIR 23 171 -91 4 976 285 162 0 0 chr17 51282277 51282345 -43990306 + (TAAA)n Simple_repeat Simple_repeat 4 71 0 4 976 230 322 36 88 chr17 51283456 51283530 -43989121 + B2_Mm2 SINE B2 1 73 -122 4 976 237 83 0 0 chr17 51283530 51283566 -43989085 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 976 230 322 36 88 chr17 51283566 51283685 -43988966 + B2_Mm2 SINE B2 74 184 -11 4 976 732 208 234 65 chr17 51283690 51283984 -43988667 + MT2A LTR ERVL 1 477 -124 4 976 411 21 0 0 chr17 51283985 51284033 -43988618 + (GGGA)n Simple_repeat Simple_repeat 1 48 0 4 976 327 25 0 0 chr17 51284033 51284073 -43988578 + (CAGAGA)n Simple_repeat Simple_repeat 1 40 0 4 976 883 207 93 32 chr17 51284171 51284464 -43988187 + ORR1D1 LTR MaLR 1 342 -42 4 976 261 330 119 5 chr17 51284568 51284787 -43987864 - RMER20B LTR ERVK -258 369 126 4 976 269 133 67 0 chr17 51284830 51284875 -43987776 + ORR1D1 LTR MaLR 337 384 0 4 976 664 69 0 0 chr17 51284952 51285039 -43987612 + B1_Mm SINE Alu 61 147 0 4 976 21 0 0 0 chr17 51285049 51285070 -43987581 + AT_rich Low_complexity Low_complexity 1 21 0 4 976 24 32 0 0 chr17 51285139 51285170 -43987481 + AT_rich Low_complexity Low_complexity 1 31 0 4 976 777 143 7 36 chr17 51285183 51285321 -43987330 + B1_Mur3 SINE Alu 5 138 -11 4 976 27 0 0 0 chr17 51285698 51285725 -43986926 + AT_rich Low_complexity Low_complexity 1 27 0 4 976 7318 76 29 27 chr17 51285846 51286946 -43985705 + Lx3_Mus LINE L1 5908 7009 0 4 976 189 0 0 0 chr17 51287075 51287096 -43985555 + (CAGT)n Simple_repeat Simple_repeat 1 21 0 4 976 279 0 0 0 chr17 51287102 51287133 -43985518 + (TCTCTG)n Simple_repeat Simple_repeat 4 34 0 4 976 198 0 0 0 chr17 51287134 51287156 -43985495 + (TCCC)n Simple_repeat Simple_repeat 3 24 0 4 976 219 103 0 0 chr17 51287162 51287201 -43985450 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 976 490 284 100 6 chr17 51287589 51287759 -43984892 - MER5C1 DNA MER1_type -77 186 1 4 976 1087 184 32 0 chr17 51287777 51287967 -43984684 + B3 SINE B2 1 196 -20 4 976 21 0 0 0 chr17 51288010 51288031 -43984620 + AT_rich Low_complexity Low_complexity 1 21 0 4 976 569 55 0 0 chr17 51288045 51288118 -43984533 + RLTR31_Mm LTR ERVK 1 73 -488 4 976 274 298 106 0 chr17 51289199 51289293 -43983358 + B4A SINE B4 101 204 -88 4 976 276 30 0 0 chr17 51289306 51289339 -43983312 + (CATA)n Simple_repeat Simple_repeat 3 35 0 4 976 369 43 0 0 chr17 51289339 51289386 -43983265 + (GA)n Simple_repeat Simple_repeat 1 47 0 4 976 31 44 0 0 chr17 51289854 51289899 -43982752 + AT_rich Low_complexity Low_complexity 1 45 0 4 976 228 311 44 0 chr17 51290470 51290489 -43982162 - ID_B1 SINE B4 -128 96 3 4 976 290 243 14 14 chr17 51290489 51290560 -43982091 - ID4 SINE ID -10 73 3 4 976 310 256 0 12 chr17 51290615 51290698 -43981953 - ID_B1 SINE B4 -63 161 80 4 976 23 54 0 0 chr17 51290982 51291019 -43981632 + AT_rich Low_complexity Low_complexity 1 37 0 4 976 24 0 0 0 chr17 51291494 51291518 -43981133 + AT_rich Low_complexity Low_complexity 1 24 0 4 976 24 32 0 0 chr17 51292135 51292166 -43980485 + AT_rich Low_complexity Low_complexity 1 31 0 4 976 970 218 23 5 chr17 51292280 51292501 -43980150 + URR1A DNA MER1_type 1 225 -1 4 976 4632 87 8 3 chr17 51292697 51293330 -43979321 - L1_Mus2 LINE L1 -2 6564 5929 4 976 10883 91 5 15 chr17 51293330 51294283 -43978368 - L1_Mm LINE L1 -204 5679 4746 4 976 1141 82 0 0 chr17 51294283 51294430 -43978221 - B1_Mm SINE Alu 0 147 1 4 976 10883 91 5 15 chr17 51294430 51295033 -43977618 - L1_Mm LINE L1 -1138 4745 4139 4 976 477 268 99 81 chr17 51295043 51295254 -43977397 - MER20 DNA MER1_type -4 215 1 4 976 29 0 0 0 chr17 51295529 51295558 -43977093 + AT_rich Low_complexity Low_complexity 1 29 0 4 976 246 156 0 0 chr17 51295577 51295622 -43977029 + CT-rich Low_complexity Low_complexity 1 45 0 4 976 28 61 0 0 chr17 51295658 51295707 -43976944 + AT_rich Low_complexity Low_complexity 1 49 0 4 976 246 95 0 0 chr17 51296038 51296080 -43976571 + (A)n Simple_repeat Simple_repeat 1 42 0 4 976 1231 41 0 0 chr17 51297104 51297251 -43975400 + B1_Mm SINE Alu 1 147 0 4 976 327 274 20 50 chr17 51297863 51297963 -43974688 + ID_B1 SINE B4 81 177 -47 4 976 533 168 78 19 chr17 51297876 51297979 -43974672 + B1_Mur3 SINE Alu 12 120 0 4 976 426 313 73 24 chr17 51297984 51298272 -43974379 + L1_Mur3 LINE L1 2745 3046 -2834 4 976 3314 202 55 18 chr17 51298542 51299336 -43973315 + RMER1B Other Other 142 1057 -9 4 976 3569 241 89 63 chr17 51299342 51300869 -43971782 + L1_Mur3 LINE L1 3078 4644 -1236 4 976 586 166 27 60 chr17 51300886 51301017 -43971634 + ORR1C1 LTR MaLR 211 329 -49 4 976 5360 173 169 40 chr17 51301035 51301985 -43970666 + ORR1C1-int LTR MaLR 1 1134 -375 4 976 2617 157 122 6 chr17 51301985 51302509 -43970142 + RMER4B LTR ERVK 1 585 0 4 976 5360 173 169 40 chr17 51302509 51302894 -43969757 + ORR1C1-int LTR MaLR 1135 1509 0 4 976 1270 185 34 74 chr17 51302894 51303163 -43969488 + ORR1C1 LTR MaLR 1 258 -120 4 976 1572 324 77 21 chr17 51303172 51303910 -43968741 + Lx8 LINE L1 6226 7004 -692 4 976 205 164 16 16 chr17 51303945 51303967 -43968684 + (TA)n Simple_repeat Simple_repeat 2 22 0 4 976 474 18 0 0 chr17 51303967 51304022 -43968629 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 976 205 164 16 16 chr17 51304022 51304061 -43968590 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 976 871 282 120 42 chr17 51304106 51304991 -43967660 + L1M4 LINE L1 2668 3708 -2438 4 976 659 263 43 28 chr17 51304991 51305202 -43967449 + ID_B1 SINE B4 4 217 -7 4 976 567 294 256 8 chr17 51305202 51305405 -43967246 + L1M4 LINE L1 3709 3953 -2193 4 976 472 259 85 16 chr17 51305501 51305807 -43966844 + L1M4 LINE L1 4190 4516 -1630 4 976 243 0 0 0 chr17 51305824 51305851 -43966800 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 976 285 210 32 0 chr17 51305892 51305954 -43966697 + RMER5 LTR ERV1 33 96 -438 4 976 359 248 310 0 chr17 51306010 51306022 -43966629 - ID_B1 SINE B4 -3 221 144 4 976 625 194 0 0 chr17 51306022 51306115 -43966536 - B1_Mur3 SINE Alu -56 93 1 4 976 1015 257 147 16 chr17 51306115 51306481 -43966170 + RMER5 LTR ERV1 113 526 -8 4 976 234 0 0 0 chr17 51306755 51306781 -43965870 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 4 976 1013 39 78 0 chr17 51306781 51306909 -43965742 - B1_Mus1 SINE Alu -10 138 1 5 976 279 0 0 0 chr17 51307927 51307958 -43964693 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 976 621 341 4 22 chr17 51307973 51308249 -43964402 + Lx8 LINE L1 7052 7322 -374 4 976 282 95 0 0 chr17 51308260 51308302 -43964349 + (T)n Simple_repeat Simple_repeat 1 42 0 5 976 1287 112 16 0 chr17 51308316 51308503 -43964148 + B2_Mm2 SINE B2 1 190 -5 5 976 54 68 0 0 chr17 51308559 51308662 -43963989 + AT_rich Low_complexity Low_complexity 1 103 0 5 976 21 36 0 0 chr17 51309907 51309935 -43962716 + AT_rich Low_complexity Low_complexity 1 28 0 5 976 242 250 58 39 chr17 51310279 51310383 -43962268 + L1_Rod LINE L1 527 632 -6976 5 976 921 248 143 27 chr17 51310391 51310909 -43961742 + L1_Rod LINE L1 754 1331 -4516 5 976 893 245 166 40 chr17 51310906 51311176 -43961475 + Lx9 LINE L1 7182 7463 -181 5 976 405 0 0 0 chr17 51311176 51311221 -43961430 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 976 893 245 166 40 chr17 51311221 51311353 -43961298 + Lx9 LINE L1 7464 7634 -10 5 976 401 262 82 183 chr17 51311702 51311959 -43960692 + MTE2a LTR MaLR 1 231 -148 5 976 555 276 21 0 chr17 51312245 51312390 -43960261 + B1F1 SINE Alu 1 148 -1 5 976 23 68 0 0 chr17 51312512 51312556 -43960095 + AT_rich Low_complexity Low_complexity 1 44 0 5 976 336 48 0 0 chr17 51313102 51313144 -43959507 + (T)n Simple_repeat Simple_repeat 1 42 0 5 976 679 227 49 14 chr17 51314691 51314834 -43957817 - B1_Mur1 SINE Alu 0 149 2 5 976 237 33 0 0 chr17 51314841 51314871 -43957780 + (A)n Simple_repeat Simple_repeat 1 30 0 5 976 272 261 11 0 chr17 51314878 51314970 -43957681 + (TA)n Simple_repeat Simple_repeat 1 93 0 5 976 247 252 48 57 chr17 51315648 51315753 -43956898 + Charlie18a DNA MER1_type 74 177 -165 5 976 221 0 0 33 chr17 51316197 51316227 -43956424 + (TAA)n Simple_repeat Simple_repeat 2 30 0 5 976 315 0 0 0 chr17 51316907 51316942 -43955709 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 5 976 306 0 0 0 chr17 51317107 51317141 -43955510 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 976 186 143 0 0 chr17 51318184 51318219 -43954432 + (CCCG)n Simple_repeat Simple_repeat 4 38 0 5 976 425 110 12 0 chr17 51318476 51318558 -43954093 + (TC)n Simple_repeat Simple_repeat 1 83 0 5 976 22 70 0 0 chr17 51318722 51318765 -43953886 + GC_rich Low_complexity Low_complexity 1 43 0 5 976 1507 187 133 0 chr17 51320110 51320425 -43952226 + ORR1C2 LTR MaLR 1 357 -27 5 976 902 175 6 0 chr17 51320501 51320678 -43951973 + GA-rich Low_complexity Low_complexity 2 179 0 5 976 225 0 0 0 chr17 51320680 51320705 -43951946 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 5 976 477 0 0 0 chr17 51321494 51321547 -43951104 + (TTTTC)n Simple_repeat Simple_repeat 2 54 0 5 976 853 151 7 20 chr17 51321559 51321708 -43950943 - B1_Mur4 SINE Alu 0 150 4 5 976 593 305 144 69 chr17 51322155 51322578 -43950073 + MLT1J LTR MaLR 22 476 -36 5 976 207 100 0 0 chr17 51322952 51322982 -43949669 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 5 976 572 383 88 46 chr17 51323150 51323648 -43949003 - MLT1F2 LTR MaLR -39 521 3 5 976 1079 236 148 19 chr17 51324290 51324614 -43948037 - ORR1D2 LTR MaLR -4 366 1 5 976 233 284 78 78 chr17 51324665 51324768 -43947883 - MLT1G1 LTR MaLR -345 234 132 5 976 198 0 0 0 chr17 51325572 51325594 -43947057 + (TTTTTG)n Simple_repeat Simple_repeat 5 26 0 5 976 180 0 0 0 chr17 51326258 51326278 -43946373 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 976 231 115 48 16 chr17 51326618 51326680 -43945971 + (TTTA)n Simple_repeat Simple_repeat 2 65 0 5 976 1205 184 11 57 chr17 51326819 51327069 -43945582 - RLTR11A LTR ERVK 0 528 289 5 976 189 0 0 0 chr17 51327069 51327090 -43945561 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 5 976 1205 306 79 62 chr17 51327090 51327223 -43945428 - RLTR11A LTR ERVK -269 291 146 5 976 7118 78 8 8 chr17 51327224 51328436 -43944215 - L1_Mus3 LINE L1 -137 6501 5293 5 976 3665 58 4 0 chr17 51328436 51328899 -43943752 - L1_Mus1 LINE L1 -1 6566 6102 5 976 5501 120 1 27 chr17 51328899 51329147 -43943504 - L1_Mus3 LINE L1 -591 5292 5054 5 976 1051 206 80 35 chr17 51329147 51329434 -43943217 - RLTR11A LTR ERVK -228 300 1 5 976 1682 235 0 46 chr17 51329434 51329800 -43942851 - RMER1A Other Other -417 613 265 5 976 213 39 0 0 chr17 51329831 51329857 -43942794 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 976 418 255 98 12 chr17 51329880 51330043 -43942608 - L1MB3 LINE L1 -295 5888 5712 5 976 228 241 103 0 chr17 51330074 51330132 -43942519 + B1F SINE Alu 68 131 -18 5 976 316 281 0 0 chr17 51330167 51330231 -43942420 + ID4_ SINE ID 6 69 -14 5 976 333 0 0 0 chr17 51330241 51330278 -43942373 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 976 405 0 0 0 chr17 51330278 51330322 -43942329 + (GA)n Simple_repeat Simple_repeat 2 46 0 5 976 311 275 66 8 chr17 51330322 51330443 -43942208 + L1MB2 LINE L1 5948 6075 -96 5 976 463 289 23 15 chr17 51330931 51331061 -43941590 + ID_B1 SINE B4 94 224 0 5 976 545 268 42 15 chr17 51331764 51332021 -43940630 - MTEa LTR MaLR 0 379 69 5 976 7726 93 45 7 chr17 51332166 51333304 -43939347 - Lx3A LINE L1 -1 6980 5800 5 976 407 261 53 80 chr17 51333598 51333748 -43938903 - MER5A1 DNA MER1_type -8 158 13 5 976 321 324 87 27 chr17 51334160 51334344 -43938307 + L2c LINE L2 3191 3385 -2 5 976 225 0 0 0 chr17 51334416 51334441 -43938210 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 976 309 221 52 0 chr17 51336492 51336569 -43936082 + B1F SINE Alu 18 98 -51 5 976 1068 141 0 0 chr17 51336585 51336762 -43935889 + (GAA)n Simple_repeat Simple_repeat 3 179 0 5 976 723 39 9 19 chr17 51336768 51336873 -43935778 + (GGAGA)n Simple_repeat Simple_repeat 3 106 0 5 976 243 278 19 0 chr17 51336914 51336968 -43935683 + RSINE1 SINE B4 3 57 -108 5 976 619 258 92 0 chr17 51337094 51337323 -43935328 + L1MA4 LINE L1 5678 5927 -373 5 976 261 0 0 0 chr17 51337342 51337371 -43935280 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 976 384 125 0 0 chr17 51337525 51337589 -43935062 + (TATATG)n Simple_repeat Simple_repeat 2 65 0 5 976 202 274 0 31 chr17 51337921 51337985 -43934666 + T-rich Low_complexity Low_complexity 4 65 0 5 976 633 215 101 13 chr17 51337986 51338230 -43934421 - Lx7 LINE L1 -6 7690 7338 5 976 485 343 81 0 chr17 51338369 51338541 -43934110 - MER63A DNA AcHobo -4 206 21 5 976 591 304 68 68 chr17 51339082 51339407 -43933244 + L2a LINE L2 3102 3426 0 5 976 282 364 52 13 chr17 51339430 51339583 -43933068 - MIRb SINE MIR -21 247 89 5 976 717 128 0 36 chr17 51339591 51339729 -43932922 + Lx LINE L1 6517 6649 -5 5 976 243 0 0 0 chr17 51339729 51339756 -43932895 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 976 538 284 21 28 chr17 51339826 51339971 -43932680 - B1_Mur2 SINE Alu 0 149 6 5 976 183 42 0 0 chr17 51340092 51340116 -43932535 + (TTG)n Simple_repeat Simple_repeat 2 25 0 5 976 467 340 56 9 chr17 51340590 51340804 -43931847 + B4A SINE B4 2 225 -67 5 976 569 273 84 12 chr17 51340811 51340978 -43931673 + B3A SINE B2 4 182 -16 5 976 30 27 0 0 chr17 51340989 51341026 -43931625 + AT_rich Low_complexity Low_complexity 1 37 0 5 976 474 18 0 0 chr17 51341076 51341131 -43931520 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 976 780 271 112 69 chr17 51341136 51341458 -43931193 + MTEa LTR MaLR 34 379 0 5 976 510 263 9 0 chr17 51341608 51341724 -43930927 + B1F2 SINE Alu 11 127 -22 5 976 31 58 0 0 chr17 51342237 51342289 -43930362 + AT_rich Low_complexity Low_complexity 1 52 0 5 976 284 121 0 33 chr17 51343533 51343593 -43929058 + (TCTCTG)n Simple_repeat Simple_repeat 3 60 0 5 976 459 0 0 0 chr17 51343619 51343670 -43928981 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 976 601 314 6 60 chr17 51343704 51343870 -43928781 - RSINE1 SINE B4 -7 158 2 5 976 397 339 135 35 chr17 51345303 51345532 -43927119 - ORR1E LTR MaLR -104 255 4 5 976 212 381 57 9 chr17 51345580 51345686 -43926965 + L2a LINE L2 3291 3401 -25 5 976 257 48 0 45 chr17 51345837 51345881 -43926770 + (CAGAGA)n Simple_repeat Simple_repeat 6 47 0 5 976 1152 294 62 43 chr17 51345882 51346113 -43926538 + L1M3 LINE L1 4265 4515 -1625 5 976 1225 225 65 73 chr17 51346113 51346496 -43926155 + ORR1C2 LTR MaLR 1 380 -4 5 976 1152 294 62 43 chr17 51346496 51346991 -43925660 + L1M3 LINE L1 4516 5005 -1135 5 976 380 240 65 16 chr17 51347036 51347159 -43925492 + MLT1K LTR MaLR 467 595 0 5 976 203 194 0 0 chr17 51347310 51347346 -43925305 + (TATG)n Simple_repeat Simple_repeat 4 39 0 5 976 696 229 110 4 chr17 51347351 51347597 -43925054 - L1M3 LINE L1 -1894 4246 3975 5 976 272 308 25 13 chr17 51347614 51347693 -43924958 - RSINE1 SINE B4 -42 123 44 5 976 254 177 161 89 chr17 51347718 51347842 -43924809 - L1M3 LINE L1 -2157 3986 3854 5 976 497 292 129 45 chr17 51347842 51348176 -43924475 + MLT1A1 LTR MaLR 19 364 -1 5 976 264 59 0 0 chr17 51348445 51348479 -43924172 + (TATG)n Simple_repeat Simple_repeat 1 34 0 5 976 393 346 23 63 chr17 51348489 51348791 -43923860 - B4A SINE B4 0 292 3 5 976 23 0 0 0 chr17 51350237 51350260 -43922391 + AT_rich Low_complexity Low_complexity 1 23 0 5 976 530 331 0 0 chr17 51350293 51350414 -43922237 + RSINE1 SINE B4 32 152 -13 5 976 745 200 89 0 chr17 51350475 51350610 -43922041 + B1_Mur1 SINE Alu 3 149 0 5 976 796 250 92 61 chr17 51350705 51351165 -43921486 - L1MB5 LINE L1 -70 6110 5639 5 976 601 248 7 33 chr17 51351265 51351415 -43921236 - RSINE1 SINE B4 0 165 20 5 976 917 265 45 22 chr17 51351452 51352041 -43920610 - L1MB5 LINE L1 -608 5575 4966 5 976 31 44 0 0 chr17 51352044 51352089 -43920562 + AT_rich Low_complexity Low_complexity 1 45 0 5 976 8451 152 48 5 chr17 51352206 51352710 -43919941 + Lx2B LINE L1 4214 4737 -1149 5 976 390 115 0 0 chr17 51352710 51352771 -43919880 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 976 8591 131 29 17 chr17 51352771 51354755 -43917896 + Lx2B LINE L1 4738 6780 -220 5 976 1093 69 0 0 chr17 51354755 51354891 -43917760 + B1_Mus2 SINE Alu 2 137 -10 6 976 182 37 37 0 chr17 51354891 51354918 -43917733 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 6 976 906 10 0 0 chr17 51354929 51355032 -43917619 + (GAA)n Simple_repeat Simple_repeat 2 104 0 6 976 8591 117 15 25 chr17 51355032 51355273 -43917378 + Lx2B LINE L1 6781 6999 -1 5 976 402 294 60 43 chr17 51355375 51355403 -43917248 - B2_Mm2 SINE B2 -7 188 161 6 976 434 88 0 14 chr17 51355403 51355472 -43917179 + (TG)n Simple_repeat Simple_repeat 1 68 0 6 976 488 294 60 43 chr17 51355472 51355628 -43917023 - B3A SINE B2 -35 160 1 6 976 22 0 0 0 chr17 51356137 51356159 -43916492 + AT_rich Low_complexity Low_complexity 1 22 0 6 976 248 280 71 45 chr17 51356808 51356920 -43915731 - MER5B DNA MER1_type -47 131 17 6 976 370 138 38 0 chr17 51357708 51357788 -43914863 + CT-rich Low_complexity Low_complexity 3 85 0 6 976 657 272 29 6 chr17 51358158 51358332 -43914319 + MTD LTR MaLR 1 178 -241 6 976 1489 158 77 0 chr17 51358333 51358631 -43914020 - Lx3C LINE L1 -201 6775 6455 6 976 2760 154 0 8 chr17 51358628 51359126 -43913525 - L1_Mur1 LINE L1 -552 5334 4841 6 976 412 162 152 8 chr17 51359117 51359235 -43913416 + Lx3C LINE L1 6785 6919 -57 6 976 1204 194 40 32 chr17 51359235 51359282 -43913369 + MTD LTR MaLR 152 195 -224 6 976 249 33 0 0 chr17 51359282 51359312 -43913339 + (TAA)n Simple_repeat Simple_repeat 1 30 0 6 976 1204 194 40 32 chr17 51359312 51359514 -43913137 + MTD LTR MaLR 196 403 -16 6 976 267 295 10 31 chr17 51359757 51359855 -43912796 - MTE2a LTR MaLR -16 363 268 6 976 275 352 44 0 chr17 51360880 51360971 -43911680 - MLT2F LTR ERVL -532 131 37 6 976 890 246 169 0 chr17 51361095 51361361 -43911290 - MTD LTR MaLR -15 404 62 6 976 271 107 54 0 chr17 51361504 51361560 -43911091 + (CACCAT)n Simple_repeat Simple_repeat 2 60 0 6 976 585 251 61 48 chr17 51361648 51361878 -43910773 + MER96B DNA hAT 184 416 -1 6 976 534 278 8 0 chr17 51361974 51362100 -43910551 - RSINE1 SINE B4 -36 129 3 6 976 26 30 0 0 chr17 51362238 51362271 -43910380 + AT_rich Low_complexity Low_complexity 1 33 0 6 976 1376 204 106 6 chr17 51362471 51362802 -43909849 + ORR1D1 LTR MaLR 3 366 -8 6 976 472 299 134 38 chr17 51363560 51363769 -43908882 - MLT1H LTR MaLR -114 435 207 6 976 303 195 165 25 chr17 51363825 51363904 -43908747 - PB1D9 SINE Alu -6 114 25 6 976 486 314 164 35 chr17 51364018 51364305 -43908346 + MLT1E1A LTR MaLR 286 609 -71 6 976 384 77 0 0 chr17 51364978 51365030 -43907621 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 976 266 338 0 0 chr17 51365061 51365135 -43907516 - B4 SINE B4 -136 156 83 6 976 390 211 133 0 chr17 51365221 51365311 -43907340 - B1F SINE Alu 0 149 48 6 976 680 266 56 25 chr17 51365503 51365700 -43906951 + RMER15 LTR ERVL 297 499 -76 6 976 467 93 0 23 chr17 51365717 51365805 -43906846 + (TCTCTG)n Simple_repeat Simple_repeat 3 88 0 6 976 342 0 0 0 chr17 51365805 51365842 -43906809 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 976 387 0 0 0 chr17 51365842 51365884 -43906767 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 976 589 261 111 6 chr17 51366507 51366688 -43905963 + B3 SINE B2 5 204 -12 6 976 725 297 77 74 chr17 51366814 51367178 -43905473 - MLT1A0 LTR MaLR 0 365 1 6 976 566 268 91 6 chr17 51367467 51367632 -43905019 + Charlie1a DNA MER1_type 21 199 -1256 6 976 824 235 0 0 chr17 51367667 51367863 -43904788 + L1MA4 LINE L1 5693 5888 -412 6 976 255 284 57 0 chr17 51368067 51368155 -43904496 + Charlie1a DNA MER1_type 218 310 -1145 6 976 671 186 217 17 chr17 51368182 51368210 -43904441 - B3 SINE B2 -6 210 184 6 976 438 20 0 0 chr17 51368210 51368261 -43904390 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 976 671 186 217 17 chr17 51368261 51368407 -43904244 - B3 SINE B2 -33 183 1 6 976 552 198 42 33 chr17 51368409 51368529 -43904122 - B1_Mur1 SINE Alu 0 149 29 6 976 477 243 188 34 chr17 51368556 51368705 -43903946 - B3A SINE B2 -12 186 15 6 976 1982 232 167 8 chr17 51368707 51369358 -43903293 + Charlie1a DNA MER1_type 288 1042 -413 6 976 2411 54 16 6 chr17 51369363 51369679 -43902972 + ORR1A2 LTR MaLR 1 319 -8 6 976 1090 222 70 35 chr17 51369690 51370059 -43902592 + Charlie1a DNA MER1_type 1057 1438 -17 6 976 329 327 142 9 chr17 51370319 51370443 -43902208 + Charlie4a DNA MER1_type 98 243 -265 6 976 288 0 0 0 chr17 51370443 51370475 -43902176 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 6 976 329 327 142 9 chr17 51370475 51370575 -43902076 + Charlie4a DNA MER1_type 244 352 -156 6 976 558 0 0 0 chr17 51370585 51370647 -43902004 + (TC)n Simple_repeat Simple_repeat 2 63 0 6 976 1729 214 61 19 chr17 51370647 51371023 -43901628 + MTD LTR MaLR 13 404 -15 6 976 6994 42 46 17 chr17 51371240 51372404 -43900247 - L1_Mus1 LINE L1 0 6567 5375 6 976 6585 34 0 0 chr17 51372404 51373177 -43899474 + L1Md_T LINE L1 5810 6582 0 6 976 3676 75 6 16 chr17 51373177 51373197 -43899454 - L1_Mus1 LINE L1 -509 5374 5355 6 976 269 253 30 43 chr17 51373197 51373298 -43899353 - MLT1J LTR MaLR -316 196 83 6 976 347 258 45 25 chr17 51373619 51373787 -43898864 + L1MC4a LINE L1 7273 7431 -611 6 976 199 26 24 73 chr17 51373921 51373962 -43898689 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 976 322 259 83 33 chr17 51374060 51374169 -43898482 + B1F2 SINE Alu 3 113 -4 6 976 284 165 17 52 chr17 51374263 51374378 -43898273 + GA-rich Low_complexity Low_complexity 4 114 0 6 976 201 325 112 0 chr17 51374471 51374551 -43898100 + MIRb SINE MIR 109 197 -71 6 976 670 255 121 98 chr17 51374567 51374719 -43897932 + B3A SINE B2 6 163 -35 6 976 534 16 0 0 chr17 51374719 51374782 -43897869 + (TC)n Simple_repeat Simple_repeat 2 64 0 6 976 380 255 121 98 chr17 51374782 51374803 -43897848 + B2_Mm2 SINE B2 162 183 -12 6 976 426 328 143 0 chr17 51375470 51375708 -43896943 + MER5C DNA MER1_type 1 272 -41 6 976 191 141 0 78 chr17 51375934 51376011 -43896640 + (TTG)n Simple_repeat Simple_repeat 2 72 0 6 976 946 212 71 25 chr17 51377764 51377962 -43894689 - B3 SINE B2 0 216 10 6 976 310 199 492 8 chr17 51377967 51378098 -43894553 - ID_B1 SINE B4 -28 196 2 6 976 186 346 49 10 chr17 51378108 51378210 -43894441 - MIR SINE MIR -67 141 36 6 976 751 244 33 79 chr17 51378296 51378510 -43894141 + B3 SINE B2 3 206 -10 6 976 189 68 44 22 chr17 51378710 51378755 -43893896 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 6 976 23 33 0 0 chr17 51379342 51379372 -43893279 + AT_rich Low_complexity Low_complexity 1 30 0 6 976 562 313 62 36 chr17 51379661 51379936 -43892715 - L4 LINE RTE -88 1941 1660 6 976 303 122 0 0 chr17 51380135 51380184 -43892467 + (T)n Simple_repeat Simple_repeat 1 49 0 6 15 1168 75 0 0 chr17 51380184 51380330 -43892321 - B1_Mus1 SINE Alu 0 148 3 6 977 21 36 0 0 chr17 51380353 51380381 -43892270 + AT_rich Low_complexity Low_complexity 1 28 0 6 977 23 68 0 0 chr17 51380956 51381000 -43891651 + AT_rich Low_complexity Low_complexity 1 44 0 6 977 405 0 0 0 chr17 51381750 51381795 -43890856 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 977 704 335 103 4 chr17 51381799 51382060 -43890591 - B4A SINE B4 -2 290 4 6 977 464 264 116 0 chr17 51382577 51382674 -43889977 + RSINE1 SINE B4 30 139 -26 6 977 543 43 0 0 chr17 51382674 51382744 -43889907 + (TC)n Simple_repeat Simple_repeat 1 70 0 6 977 464 264 116 0 chr17 51382744 51382767 -43889884 + RSINE1 SINE B4 140 163 -2 6 977 884 179 5 32 chr17 51382803 51382988 -43889663 - Lx7 LINE L1 0 7696 7517 6 977 573 174 163 21 chr17 51382998 51383139 -43889512 + RMER19C LTR ERVK 451 611 0 6 977 771 131 0 16 chr17 51383139 51383263 -43889388 - Lx7 LINE L1 -802 6894 6773 6 977 855 222 6 11 chr17 51383263 51383446 -43889205 - ORR1B2 LTR MaLR -7 371 177 6 977 524 333 30 65 chr17 51383625 51383888 -43888763 - RLTR26 LTR ERVK -203 439 186 6 977 254 310 57 85 chr17 51383923 51384064 -43888587 - RMER13A LTR ERVK -710 150 14 6 977 1088 189 10 5 chr17 51384086 51384283 -43888368 - ORR1B2 LTR MaLR -169 198 1 6 977 1407 178 0 4 chr17 51384283 51384526 -43888125 - ORR1B2-int LTR MaLR 0 1509 1268 6 977 2371 224 73 19 chr17 51384526 51385116 -43887535 + RMER15-int LTR ERVL 1619 2240 -2759 6 977 2661 228 58 37 chr17 51385242 51385674 -43886977 + RMER15-int LTR ERVL 4033 4478 -521 6 977 2281 174 44 10 chr17 51385674 51386081 -43886570 - MTC LTR MaLR 0 421 1 6 977 2661 228 58 37 chr17 51386081 51386371 -43886280 + RMER15-int LTR ERVL 4479 4770 -229 6 977 1585 209 26 29 chr17 51386473 51386823 -43885828 - ORR1B2 LTR MaLR 0 367 19 6 977 779 175 0 8 chr17 51386900 51387027 -43885624 + RLTR17 LTR ERVK 319 444 -248 6 977 231 178 22 0 chr17 51387046 51387091 -43885560 + RLTR17 LTR ERVK 501 546 -146 6 977 1005 142 85 0 chr17 51387133 51387309 -43885342 + RMER15 LTR ERVL 385 575 0 6 977 180 0 0 0 chr17 51387550 51387570 -43885081 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 6 977 1694 171 74 19 chr17 51387917 51388209 -43884442 + Lx9 LINE L1 5407 5706 -141 6 977 720 103 0 0 chr17 51388209 51388316 -43884335 + (TA)n Simple_repeat Simple_repeat 1 107 0 6 977 1694 208 84 43 chr17 51388316 51388611 -43884040 + Lx9 LINE L1 5707 6040 -1604 6 977 4994 187 58 40 chr17 51388798 51389263 -43883388 + Lx9 LINE L1 6486 6943 -701 6 977 903 161 214 0 chr17 51389263 51389431 -43883220 + B3 SINE B2 3 206 -10 6 977 4994 187 58 40 chr17 51389431 51389474 -43883177 + Lx9 LINE L1 6944 6966 -678 6 977 2903 78 24 2 chr17 51389474 51389886 -43882765 + BGLII LTR ERVK 1 421 0 6 977 4994 187 58 40 chr17 51389886 51390513 -43882138 + Lx9 LINE L1 6967 7643 -1 6 977 390 311 101 36 chr17 51390514 51390791 -43881860 - L1ME4a LINE L1 -187 5937 5643 6 977 780 262 34 95 chr17 51391105 51391367 -43881284 - B4A SINE B4 0 292 47 6 977 251 284 29 15 chr17 51391404 51391472 -43881179 + MLT1F1 LTR MaLR 318 386 -162 6 977 278 275 50 0 chr17 51391508 51391588 -43881063 + MLT1F1 LTR MaLR 484 567 -2 6 977 240 302 123 25 chr17 51391612 51391734 -43880917 + MIR SINE MIR 111 244 -18 6 977 630 281 30 25 chr17 51391855 51392052 -43880599 + B3A SINE B2 1 198 0 6 977 969 209 39 10 chr17 51392299 51392502 -43880149 - B3 SINE B2 -7 209 1 6 977 1092 320 51 50 chr17 51392515 51393042 -43879609 + MLT1F2 LTR MaLR 1 553 -7 6 977 284 268 132 27 chr17 51393227 51393484 -43879167 - L1ME4a LINE L1 -1644 4502 4219 6 977 689 264 58 140 chr17 51393671 51393764 -43878887 - RLTR16 LTR ERVK 0 505 413 6 977 396 0 0 0 chr17 51393764 51393808 -43878843 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 977 689 264 58 140 chr17 51393808 51394264 -43878387 - RLTR16 LTR ERVK -93 412 2 6 977 32 43 0 0 chr17 51395386 51395432 -43877219 + AT_rich Low_complexity Low_complexity 1 46 0 6 977 540 56 0 0 chr17 51396538 51396610 -43876041 + (CA)n Simple_repeat Simple_repeat 2 73 0 6 977 195 177 0 0 chr17 51396821 51396883 -43875768 + T-rich Low_complexity Low_complexity 1 62 0 6 977 1282 242 33 44 chr17 51397666 51398029 -43874622 - ORR1E LTR MaLR 0 359 1 6 977 535 261 61 12 chr17 51398257 51398420 -43874231 + B3 SINE B2 1 171 -45 6 977 444 19 0 0 chr17 51398436 51398489 -43874162 + (CA)n Simple_repeat Simple_repeat 1 53 0 6 977 420 363 116 42 chr17 51399298 51399891 -43872760 - L2 LINE L2 -1494 1925 1289 7 977 389 312 97 34 chr17 51400214 51400390 -43872261 + MER5A DNA MER1_type 3 189 0 7 977 195 313 43 72 chr17 51400864 51400933 -43871718 + L2a LINE L2 3360 3426 0 7 977 2061 203 157 66 chr17 51400943 51401503 -43871148 - RMER19C LTR ERVK 0 611 1 7 977 442 378 33 26 chr17 51401645 51401797 -43870854 + MER91A DNA Tip100 1 153 -43 7 977 628 287 30 48 chr17 51402778 51402943 -43869708 + RSINE1 SINE B4 2 163 -2 7 977 542 82 20 20 chr17 51402946 51403046 -43869605 + (CATAT)n Simple_repeat Simple_repeat 1 100 0 7 977 219 270 32 0 chr17 51403047 51403110 -43869541 + (CATA)n Simple_repeat Simple_repeat 1 65 0 7 977 337 364 66 55 chr17 51403852 51404035 -43868616 - MLT1I LTR MaLR -111 300 116 7 977 439 224 288 0 chr17 51404213 51404373 -43868278 - MTD LTR MaLR -16 403 209 7 977 845 119 192 0 chr17 51404423 51404574 -43868077 + B2_Mm2 SINE B2 15 194 -1 7 977 3024 234 90 99 chr17 51404868 51404944 -43867707 + RMER1B Other Other 4 82 -984 7 977 705 24 0 0 chr17 51404944 51405027 -43867624 + (GGGA)n Simple_repeat Simple_repeat 3 85 0 7 977 3024 234 90 99 chr17 51405027 51406007 -43866644 + RMER1B Other Other 83 1049 -17 7 977 1547 251 48 57 chr17 51406030 51406508 -43866143 - Lx6 LINE L1 -18 7442 6969 7 977 503 337 82 0 chr17 51406516 51406880 -43865771 - L1MA7 LINE L1 -449 5842 5440 7 977 21350 59 6 0 chr17 51407074 51410668 -43861983 - L1Md_F2 LINE L1 0 6582 2968 7 977 11369 225 81 20 chr17 51410658 51412151 -43860500 - Lx6 LINE L1 -499 6961 5406 7 977 1028 88 0 58 chr17 51412151 51412307 -43860344 - B1_Mur3 SINE Alu -2 147 1 7 977 11369 170 40 30 chr17 51412307 51414327 -43858324 - Lx6 LINE L1 -475 5405 3322 7 977 2506 178 78 68 chr17 51414353 51415158 -43857493 - Lx6 LINE L1 -1341 6119 5273 7 977 4793 114 18 68 chr17 51415158 51416003 -43856648 + RLTR13B4 LTR ERVK 1 803 0 7 977 2506 163 107 74 chr17 51416003 51416062 -43856589 - Lx6 LINE L1 -608 5272 5244 7 977 1004 103 7 0 chr17 51416062 51416198 -43856453 - B1_Mus1 SINE Alu -11 137 1 7 977 2506 163 107 74 chr17 51416198 51416263 -43856388 - Lx6 LINE L1 -637 5243 5185 7 977 743 169 4 92 chr17 51416259 51416467 -43856184 - L1_Mur3 LINE L1 -569 3345 3148 7 977 318 354 8 15 chr17 51416505 51416637 -43856014 - L1M2 LINE L1 -3147 2996 2866 7 977 3264 179 46 9 chr17 51416637 51417332 -43855319 + Lx9 LINE L1 6803 7523 -121 7 977 296 286 12 12 chr17 51417695 51417780 -43854871 + L2a LINE L2 3338 3422 -4 7 977 323 200 129 0 chr17 51417826 51417911 -43854740 + L1M2 LINE L1 5709 5804 -493 7 977 372 347 0 0 chr17 51418198 51418319 -43854332 + Charlie13b DNA Charlie 173 293 -219 7 977 730 239 22 27 chr17 51418847 51419156 -43853495 + ORR1D2 LTR MaLR 6 374 0 7 977 268 346 73 18 chr17 51419158 51419376 -43853275 - L1MC LINE L1 -2176 5706 5477 7 977 219 267 147 127 chr17 51419674 51419824 -43852827 - L4 LINE RTE -168 1861 1709 7 977 278 312 40 74 chr17 51420027 51420176 -43852475 + MIR SINE MIR 26 169 -93 7 977 667 190 0 0 chr17 51420187 51420303 -43852348 + B3A SINE B2 1 116 -82 7 977 225 271 17 0 chr17 51420918 51420977 -43851674 - MLT1K LTR MaLR -46 549 490 7 977 29 0 0 0 chr17 51421353 51421382 -43851269 + AT_rich Low_complexity Low_complexity 1 29 0 7 977 257 320 118 33 chr17 51422659 51422811 -43849840 + MIRb SINE MIR 84 248 -20 7 977 520 267 82 40 chr17 51423040 51423253 -43849398 + ORR1E LTR MaLR 2 221 -149 7 977 2746 169 16 24 chr17 51423575 51424078 -43848573 - RLTR16 LTR ERVK 0 505 7 7 977 195 349 67 60 chr17 51424468 51424602 -43848049 - MER5A DNA MER1_type -27 162 28 7 977 1334 209 60 103 chr17 51424722 51425121 -43847530 - ORR1C2 LTR MaLR -2 382 1 7 977 932 300 41 52 chr17 51425446 51425717 -43846934 + B4A SINE B4 2 269 -23 7 977 408 20 0 0 chr17 51425732 51425781 -43846870 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 977 254 287 29 10 chr17 51425799 51425901 -43846750 + (CA)n Simple_repeat Simple_repeat 1 104 0 7 977 708 309 174 41 chr17 51425922 51426604 -43846047 - Charlie7 DNA MER1_type -540 2072 1300 7 977 183 42 0 0 chr17 51426622 51426646 -43846005 + (CAA)n Simple_repeat Simple_repeat 2 25 0 7 977 21 71 0 0 chr17 51426699 51426741 -43845910 + AT_rich Low_complexity Low_complexity 1 42 0 7 977 654 207 67 0 chr17 51426762 51426897 -43845754 - ID_B1 SINE B4 0 224 81 7 977 327 342 42 24 chr17 51426896 51427061 -43845590 - Charlie7 DNA MER1_type -1441 1171 1004 7 977 1186 43 0 0 chr17 51427134 51427275 -43845376 + B1_Mus2 SINE Alu 1 141 -6 7 977 454 291 27 0 chr17 51427443 51427553 -43845098 + PB1 SINE Alu 11 123 -4 7 977 29 28 0 0 chr17 51427652 51427688 -43844963 + AT_rich Low_complexity Low_complexity 1 36 0 7 977 543 259 69 0 chr17 51427981 51428112 -43844539 + ID_B1 SINE B4 85 224 0 7 977 396 305 0 78 chr17 51428278 51428420 -43844231 + RMER10B LTR ERVL 238 368 -30 7 977 213 39 0 0 chr17 51428798 51428824 -43843827 + (T)n Simple_repeat Simple_repeat 1 26 0 7 977 275 272 51 34 chr17 51428824 51428942 -43843709 - Charlie7 DNA MER1_type -2228 384 265 7 977 2933 82 13 3 chr17 51429242 51429623 -43843028 + IAPEY_LTR LTR ERVK 1 385 0 7 977 288 148 0 0 chr17 51429972 51430033 -43842618 + (TG)n Simple_repeat Simple_repeat 1 61 0 7 977 326 361 45 6 chr17 51430075 51430231 -43842420 - LTR16D LTR ERVL -15 636 475 7 977 408 303 9 0 chr17 51430855 51430964 -43841687 + MTEa LTR MaLR 1 110 -269 7 977 1557 211 67 35 chr17 51431023 51431150 -43841501 - Lx8 LINE L1 -332 7141 7001 7 977 361 0 0 39 chr17 51431150 51431201 -43841450 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 7 977 1557 211 67 35 chr17 51431201 51431476 -43841175 - Lx8 LINE L1 -473 7000 6726 7 977 1301 198 183 19 chr17 51431563 51431923 -43840728 + MTD LTR MaLR 1 419 0 7 977 457 140 21 11 chr17 51432015 51432109 -43840542 + GA-rich Low_complexity Low_complexity 3 97 0 7 977 237 228 0 0 chr17 51432124 51432181 -43840470 - L2 LINE L2 -831 2588 2532 7 977 312 27 0 0 chr17 51432424 51432461 -43840190 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 977 414 0 0 0 chr17 51432461 51432506 -43840145 + (GA)n Simple_repeat Simple_repeat 1 46 0 7 977 2431 73 3 0 chr17 51434167 51434484 -43838167 + ORR1A2 LTR MaLR 1 318 -9 7 977 10360 133 77 16 chr17 51434489 51434832 -43837819 + ORR1A2-int LTR MaLR 1 346 -1617 7 977 246 32 0 0 chr17 51434832 51434863 -43837788 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 977 10360 133 77 16 chr17 51434863 51436368 -43836283 + ORR1A2-int LTR MaLR 347 1962 -1 7 977 2198 83 3 26 chr17 51436368 51436676 -43835975 + ORR1A2 LTR MaLR 1 301 -26 7 977 2259 164 44 7 chr17 51437523 51437929 -43834722 - MTC LTR MaLR 0 421 1 7 977 255 255 212 10 chr17 51438397 51438496 -43834155 + RMER15 LTR ERVL 278 396 -179 7 977 26 64 0 0 chr17 51438816 51438863 -43833788 + AT_rich Low_complexity Low_complexity 1 47 0 7 977 24 67 0 0 chr17 51438892 51438937 -43833714 + AT_rich Low_complexity Low_complexity 1 45 0 7 977 960 156 129 15 chr17 51439097 51439299 -43833352 + URR1B DNA MER1_type 1 225 0 7 977 199 0 65 0 chr17 51439901 51439932 -43832719 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 7 977 3172 127 83 15 chr17 51440034 51440553 -43832098 + Lx4A LINE L1 6505 7058 0 7 977 232 48 23 23 chr17 51440971 51441014 -43831637 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 7 977 384 256 0 12 chr17 51441094 51441177 -43831474 - ID4_ SINE ID 0 83 2 7 977 711 231 142 28 chr17 51442384 51442602 -43830049 + ORR1E LTR MaLR 13 255 -104 7 977 2759 125 27 12 chr17 51442769 51443182 -43829469 + MTC LTR MaLR 3 421 0 7 977 328 269 14 36 chr17 51444989 51445128 -43827523 + (CATATA)n Simple_repeat Simple_repeat 4 139 0 7 977 270 206 0 0 chr17 51445134 51445207 -43827444 + (CA)n Simple_repeat Simple_repeat 2 74 0 7 977 317 62 62 0 chr17 51445210 51445258 -43827393 + HAL1-3A_ME LINE L1 1976 2026 -832 7 977 267 320 132 30 chr17 51445535 51445776 -43826875 + MLT1K LTR MaLR 13 349 -246 7 977 265 323 10 10 chr17 51445800 51445900 -43826751 + PB1D10 SINE Alu 6 105 -12 7 977 180 0 0 0 chr17 51446084 51446104 -43826547 + (TTTTTA)n Simple_repeat Simple_repeat 5 24 0 7 977 761 185 0 0 chr17 51446105 51446240 -43826411 - B1_Mur4 SINE Alu -1 149 15 7 977 510 192 18 9 chr17 51446535 51446642 -43826009 - B1_Mur3 SINE Alu -7 142 3 7 977 249 33 0 0 chr17 51447150 51447180 -43825471 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 7 977 208 336 77 21 chr17 51449030 51449173 -43823478 - MIRb SINE MIR 0 268 118 7 977 3828 53 0 0 chr17 51449315 51449771 -43822880 + L1_Mus1 LINE L1 6112 6567 0 7 977 1134 77 0 0 chr17 51450108 51450251 -43822400 - B1_Mus2 SINE Alu -2 145 3 7 977 607 237 23 135 chr17 51450474 51450689 -43821962 - B3 SINE B2 -12 204 14 7 977 1952 206 36 38 chr17 51450991 51451434 -43821217 - Lx6 LINE L1 0 7460 7019 7 977 329 312 21 0 chr17 51451766 51451859 -43820792 + GA-rich Low_complexity Low_complexity 2 96 0 7 977 23 0 0 0 chr17 51452321 51452344 -43820307 + AT_rich Low_complexity Low_complexity 1 23 0 7 977 250 307 98 10 chr17 51452355 51452457 -43820194 - MTC LTR MaLR -310 111 1 7 977 246 204 0 0 chr17 51452784 51452828 -43819823 + ORR1E LTR MaLR 1 44 -377 7 977 192 152 0 0 chr17 51452931 51452964 -43819687 + T-rich Low_complexity Low_complexity 2 34 0 7 977 205 302 0 0 chr17 51453249 51453302 -43819349 - MER5A DNA MER1_type -61 128 76 7 977 408 357 82 12 chr17 51455014 51455354 -43817297 - ORR1D2 LTR MaLR 0 370 7 7 977 495 268 146 69 chr17 51455407 51455668 -43816983 + ORR1E LTR MaLR 72 352 -7 7 977 244 251 0 0 chr17 51455890 51455952 -43816699 + L2c LINE L2 3309 3382 -5 7 977 205 288 225 0 chr17 51456144 51456255 -43816396 - MIRb SINE MIR -19 249 114 7 977 800 269 105 76 chr17 51456757 51457099 -43815552 - ORR1E LTR MaLR -6 353 2 7 977 933 163 214 0 chr17 51457450 51457628 -43815023 + B3 SINE B2 1 216 0 7 977 910 189 68 24 chr17 51458035 51458241 -43814410 - B3 SINE B2 0 216 2 7 977 351 0 0 0 chr17 51458248 51458287 -43814364 + (TTG)n Simple_repeat Simple_repeat 1 39 0 8 977 576 263 168 0 chr17 51458287 51458466 -43814185 - ID_B1 SINE B4 -13 211 3 8 977 436 246 108 36 chr17 51459843 51459982 -43812669 + RSINE1 SINE B4 2 150 -15 8 977 308 64 21 0 chr17 51459985 51460032 -43812619 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 977 255 31 0 0 chr17 51462268 51462300 -43810351 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 8 977 24 0 0 0 chr17 51462836 51462860 -43809791 + AT_rich Low_complexity Low_complexity 1 24 0 8 977 202 155 19 58 chr17 51463010 51463113 -43809538 + (TA)n Simple_repeat Simple_repeat 1 99 0 8 977 400 227 103 53 chr17 51463166 51463349 -43809302 - L1MA4 LINE L1 -340 5957 5782 8 977 414 0 0 0 chr17 51464101 51464147 -43808504 + (TTAGGG)n Simple_repeat Simple_repeat 5 50 0 8 977 3699 52 4 79 chr17 51464972 51465493 -43807158 - RLTR45 LTR ERVK 0 482 1 8 977 24 32 0 0 chr17 51465727 51465758 -43806893 + AT_rich Low_complexity Low_complexity 1 31 0 8 977 251 328 146 41 chr17 51466134 51466371 -43806280 + MLT2B3 LTR ERVL 258 525 -29 8 977 192 40 0 0 chr17 51466371 51466396 -43806255 + (TG)n Simple_repeat Simple_repeat 2 26 0 8 977 251 328 146 41 chr17 51466396 51466425 -43806226 + MLT2B3 LTR ERVL 526 552 -2 8 977 293 141 0 45 chr17 51467197 51467264 -43805387 + (TG)n Simple_repeat Simple_repeat 1 64 0 8 977 263 224 187 0 chr17 51467264 51467371 -43805280 - B4A SINE B4 0 292 166 8 977 528 204 193 74 chr17 51467381 51467624 -43805027 - RLTR10A LTR ERVK 0 411 140 8 977 372 22 0 0 chr17 51467858 51467903 -43804748 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 977 550 265 0 0 chr17 51467912 51468029 -43804622 - ID_B1 SINE B4 -20 204 88 8 977 810 258 106 65 chr17 51468067 51468510 -43804141 + LTR37B LTR ERV1 7 467 -1 8 977 797 181 211 17 chr17 51468708 51468888 -43803763 + B3 SINE B2 2 216 0 8 977 4161 29 4 6 chr17 51469042 51469532 -43803119 + L1Md_F3 LINE L1 6095 6583 -1 8 977 816 177 57 91 chr17 51469546 51469776 -43802875 - MYSERV6-int LTR ERVK -674 8285 8064 8 977 204 190 0 23 chr17 51469992 51470035 -43802616 - L2a LINE L2 -11 3415 3374 8 977 876 175 0 0 chr17 51470134 51470271 -43802380 + B1_Mus1 SINE Alu 1 137 -11 8 977 279 79 0 0 chr17 51470271 51470309 -43802342 + (CAAAG)n Simple_repeat Simple_repeat 2 39 0 8 977 5375 57 0 1 chr17 51470498 51471178 -43801473 - L1Md_F2 LINE L1 0 6582 5910 8 977 6776 45 0 0 chr17 51471178 51472061 -43800590 + L1Md_F2 LINE L1 5063 5945 -637 8 977 231 61 0 0 chr17 51472606 51472639 -43800012 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 8 977 393 314 29 36 chr17 51472677 51472816 -43799835 - ORR1E LTR MaLR -170 189 52 8 977 354 236 22 11 chr17 51473465 51473555 -43799096 + RSINE1 SINE B4 3 93 -72 8 977 7858 72 2 5 chr17 51473581 51475073 -43797578 + L1_Mus2 LINE L1 5076 6564 -2 8 977 235 214 40 11 chr17 51475143 51475325 -43797326 + (TA)n Simple_repeat Simple_repeat 1 187 0 8 977 755 154 50 29 chr17 51475326 51475466 -43797185 - B1_Mur3 SINE Alu -5 144 2 8 977 445 167 141 8 chr17 51475869 51475990 -43796661 + MER112 DNA MER1_type 32 168 -93 8 977 197 170 0 36 chr17 51476329 51476384 -43796267 + CT-rich Low_complexity Low_complexity 5 57 0 8 977 23 0 0 0 chr17 51476384 51476407 -43796244 + AT_rich Low_complexity Low_complexity 1 23 0 8 977 2207 95 69 1 chr17 51476832 51477180 -43795471 + ORR1B1 LTR MaLR 15 380 -14 8 977 252 0 0 0 chr17 51477180 51477208 -43795443 + (A)n Simple_repeat Simple_repeat 1 28 0 8 977 189 290 32 0 chr17 51478937 51478999 -43793652 + MER5B DNA MER1_type 47 110 -68 8 977 1973 142 28 22 chr17 51479151 51479475 -43793176 - ORR1A3 LTR MaLR 0 326 1 8 977 509 160 0 11 chr17 51480010 51480105 -43792546 + ORR1D1 LTR MaLR 3 96 -278 8 977 403 209 68 0 chr17 51480117 51480232 -43792419 + ORR1D1 LTR MaLR 250 374 0 8 977 313 253 0 29 chr17 51480286 51480424 -43792227 + B3A SINE B2 2 179 -37 8 977 495 33 0 0 chr17 51480424 51480485 -43792166 + (CA)n Simple_repeat Simple_repeat 2 62 0 8 977 393 22 0 0 chr17 51480485 51480530 -43792121 + (GA)n Simple_repeat Simple_repeat 2 47 0 8 977 618 245 60 60 chr17 51480540 51480788 -43791863 + MLT1A1 LTR MaLR 161 408 0 8 977 211 245 19 0 chr17 51481822 51481875 -43790776 + T-rich Low_complexity Low_complexity 2 55 0 8 977 288 70 0 0 chr17 51482135 51482178 -43790473 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 977 1507 105 0 0 chr17 51482406 51482616 -43790035 - Lx2 LINE L1 -1011 5986 5777 8 977 3179 94 12 2 chr17 51482615 51483041 -43789610 + Lx2 LINE L1 6217 6646 -351 8 977 974 160 23 0 chr17 51483042 51483217 -43789434 + Lx2 LINE L1 6775 6953 -44 8 977 189 0 0 0 chr17 51483239 51483260 -43789391 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 8 977 225 0 0 0 chr17 51483550 51483575 -43789076 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 8 977 1124 230 120 3 chr17 51483831 51484123 -43788528 + ORR1D2 LTR MaLR 43 368 -2 8 977 1154 107 6 0 chr17 51484170 51484347 -43788304 + (TTC)n Simple_repeat Simple_repeat 3 180 0 8 977 570 29 0 0 chr17 51484347 51484415 -43788236 + (TCC)n Simple_repeat Simple_repeat 1 68 0 8 977 288 0 0 0 chr17 51484553 51484585 -43788066 + (TCTA)n Simple_repeat Simple_repeat 2 33 0 8 977 3375 191 95 75 chr17 51484873 51485813 -43786838 + RMER17B LTR ERVK 1 958 0 8 977 675 0 0 0 chr17 51486348 51486423 -43786228 + (GGAGA)n Simple_repeat Simple_repeat 5 79 0 8 977 711 271 63 82 chr17 51486744 51487062 -43785589 - MT2A LTR ERVL -97 436 125 8 977 242 220 207 50 chr17 51487302 51487404 -43785247 - MLT1E2 LTR MaLR -133 494 425 8 977 614 273 36 30 chr17 51487527 51487693 -43784958 + B3A SINE B2 4 170 -28 8 977 270 106 0 0 chr17 51487737 51487784 -43784867 + (CA)n Simple_repeat Simple_repeat 1 47 0 8 977 24 0 0 0 chr17 51488162 51488186 -43784465 + AT_rich Low_complexity Low_complexity 1 24 0 8 977 184 115 0 0 chr17 51488756 51488782 -43783869 + MIR3 SINE MIR 150 175 -33 8 977 4267 112 339 3 chr17 51488981 51489259 -43783392 + Lx5 LINE L1 904 1261 -5825 8 977 268 43 21 21 chr17 51489259 51489306 -43783345 + (CAA)n Simple_repeat Simple_repeat 2 48 0 8 977 4267 148 57 11 chr17 51489306 51490078 -43782573 + Lx5 LINE L1 1262 2068 -3809 8 977 5774 154 60 4 chr17 51490087 51490236 -43782415 + Lx5 LINE L1 3631 3799 -2078 8 977 468 0 0 0 chr17 51490236 51490288 -43782363 + (CA)n Simple_repeat Simple_repeat 2 53 0 8 977 5774 154 60 4 chr17 51490288 51491195 -43781456 + Lx5 LINE L1 3800 4745 -1132 8 977 1180 189 34 25 chr17 51491196 51491435 -43781216 - RLTR23 LTR ERV1 0 430 190 8 977 387 56 0 0 chr17 51491443 51491497 -43781154 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 8 977 480 73 171 0 chr17 51491515 51491597 -43781054 - RLTR23 LTR ERV1 -324 106 11 8 977 4938 151 27 9 chr17 51491622 51492480 -43780171 + Lx5 LINE L1 4755 5627 -250 8 977 633 200 56 50 chr17 51492480 51492863 -43779788 + RMER17C LTR ERVK 1 269 -141 8 977 7071 102 39 9 chr17 51492943 51494276 -43778375 - Lx LINE L1 -7 6647 5272 8 977 5795 190 58 27 chr17 51494276 51495497 -43777154 + Lx5 LINE L1 5792 7050 0 8 977 28 29 0 0 chr17 51495553 51495588 -43777063 + AT_rich Low_complexity Low_complexity 1 35 0 8 977 937 153 6 6 chr17 51496117 51496294 -43776357 + CT-rich Low_complexity Low_complexity 4 180 0 8 977 508 263 17 50 chr17 51496797 51496977 -43775674 + MER3 DNA MER1_type 36 209 0 8 977 401 263 62 50 chr17 51502673 51502702 -43769949 - RSINE1 SINE B4 -1 164 137 1 977 330 26 0 0 chr17 51502702 51502741 -43769910 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 977 401 263 62 50 chr17 51502741 51502871 -43769780 - RSINE1 SINE B4 -29 136 3 1 977 9122 11 0 0 chr17 51503240 51504761 -43767890 - L1Md_T LINE L1 0 6582 5098 3 977 205 262 34 127 chr17 51504889 51505007 -43767644 - MIR3 SINE MIR -92 116 10 4 977 216 67 0 0 chr17 51505994 51506024 -43766627 + (TTA)n Simple_repeat Simple_repeat 2 31 0 5 977 524 254 38 115 chr17 51506148 51506357 -43766294 - B3A SINE B2 -5 193 1 6 977 182 270 15 31 chr17 51507298 51507363 -43765288 + L3 LINE CR1 3964 4027 -462 7 977 248 186 17 0 chr17 51507927 51507986 -43764665 + (CATATA)n Simple_repeat Simple_repeat 4 63 0 8 977 188 224 102 17 chr17 51509096 51509155 -43763496 - MIRc SINE MIR -144 124 61 9 977 297 51 0 0 chr17 51509854 51509893 -43762758 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1 977 21 0 0 0 chr17 51510977 51510998 -43761653 + AT_rich Low_complexity Low_complexity 1 21 0 1 977 209 122 24 0 chr17 51511202 51511243 -43761408 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 1 978 346 298 53 8 chr17 51511998 51512130 -43760521 + Charlie4a DNA MER1_type 365 502 -6 1 978 2073 284 95 20 chr17 51512474 51513342 -43759309 - L1MA6 LINE L1 -33 6267 5335 1 978 632 264 18 65 chr17 51513342 51513512 -43759139 + RSINE1 SINE B4 3 164 -1 1 978 1054 260 166 68 chr17 51513512 51514167 -43758484 - L1MA6 LINE L1 -809 5334 4631 1 978 378 0 0 0 chr17 51514167 51514209 -43758442 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 978 1054 260 166 68 chr17 51514209 51514304 -43758347 - L1MA6 LINE L1 -1513 4630 4530 1 978 5034 57 10 13 chr17 51514304 51514925 -43757726 + L1Md_F2 LINE L1 5961 6579 -3 1 978 1054 260 166 68 chr17 51514925 51515145 -43757506 - L1MA6 LINE L1 -1614 4529 4264 1 978 853 234 111 0 chr17 51515767 51515938 -43756713 - B3 SINE B2 -26 190 1 1 978 541 112 41 0 chr17 51516364 51516462 -43756189 + CT-rich Low_complexity Low_complexity 5 106 0 1 978 477 50 0 0 chr17 51516463 51516523 -43756128 + (TTCC)n Simple_repeat Simple_repeat 2 61 0 2 978 28 0 0 0 chr17 51516535 51516563 -43756088 + AT_rich Low_complexity Low_complexity 1 28 0 2 978 4725 175 49 52 chr17 51517173 51518206 -43754445 - RLTR25A LTR ERVK -73 1030 1 2 978 24 53 0 0 chr17 51518307 51518345 -43754306 + AT_rich Low_complexity Low_complexity 1 38 0 2 978 23 78 0 0 chr17 51518492 51518543 -43754108 + AT_rich Low_complexity Low_complexity 1 51 0 2 978 791 118 23 16 chr17 51518649 51518778 -43753873 + L1MA5 LINE L1 6165 6294 -6 2 978 436 331 84 38 chr17 51518932 51519384 -43753267 - L1M5 LINE L1 -2065 4081 3609 2 978 553 242 8 8 chr17 51519664 51519785 -43752866 - RSINE1 SINE B4 -28 137 17 2 978 1062 237 51 70 chr17 51520209 51520637 -43752014 - RLTR11B LTR ERVK -9 432 1 2 978 189 0 0 0 chr17 51520666 51520687 -43751964 + (TG)n Simple_repeat Simple_repeat 1 21 0 2 978 1306 111 18 0 chr17 51520849 51521020 -43751631 + B2_Mm2 SINE B2 3 176 -19 3 978 1324 40 0 0 chr17 51521577 51521725 -43750926 + B1_Mus1 SINE Alu 1 148 0 3 978 25 0 0 0 chr17 51521767 51521792 -43750859 + AT_rich Low_complexity Low_complexity 1 25 0 3 978 918 143 45 0 chr17 51522379 51522512 -43750139 - B1_Mur4 SINE Alu -10 140 2 3 978 198 143 0 0 chr17 51522524 51522559 -43750092 + (T)n Simple_repeat Simple_repeat 1 35 0 3 978 6607 51 4 0 chr17 51522598 51523358 -43749293 - L1_Mus1 LINE L1 -1 6566 5804 3 978 664 89 0 0 chr17 51523358 51523448 -43749203 + L1_Mus1 LINE L1 5708 5797 -839 3 978 189 299 77 95 chr17 51523564 51523786 -43748865 + L2a LINE L2 3155 3372 -54 3 978 356 345 43 38 chr17 51523833 51524044 -43748607 - L2a LINE L2 -16 3410 3199 3 978 285 287 134 12 chr17 51524448 51524695 -43747956 - L1M2 LINE L1 -2583 3560 3284 3 978 5243 154 58 1 chr17 51524716 51525530 -43747121 + Lx4A LINE L1 6198 7057 -1 3 978 609 52 0 0 chr17 51525539 51525616 -43747035 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 4 978 1447 301 68 50 chr17 51525631 51526436 -43746215 - L1M2 LINE L1 -2609 3271 2422 3 978 393 22 0 0 chr17 51526436 51526482 -43746169 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 978 1447 302 70 51 chr17 51526482 51526850 -43745801 - L1M2 LINE L1 -3697 2446 2059 3 978 576 29 0 0 chr17 51526850 51526920 -43745731 + (TC)n Simple_repeat Simple_repeat 1 70 0 4 978 1380 313 86 65 chr17 51526920 51527465 -43745186 - L1M2 LINE L1 -3822 2058 1516 3 978 757 299 175 9 chr17 51527496 51527854 -43744797 + MTD LTR MaLR 1 419 0 4 978 1387 266 26 39 chr17 51528116 51528582 -43744069 - RMER5 LTR ERV1 -32 502 43 4 978 24 0 0 0 chr17 51529498 51529522 -43743129 + AT_rich Low_complexity Low_complexity 1 24 0 4 978 972 190 0 74 chr17 51530101 51530277 -43742374 + RSINE1 SINE B4 3 165 0 4 978 21 36 0 0 chr17 51530278 51530306 -43742345 + AT_rich Low_complexity Low_complexity 1 28 0 4 978 1053 189 0 20 chr17 51531639 51531834 -43740817 + URR1B DNA MER1_type 35 225 0 4 978 344 230 40 0 chr17 51532385 51532459 -43740192 + ID4_ SINE ID 2 78 -5 4 978 726 12 0 0 chr17 51532761 51532844 -43739807 + (GAAA)n Simple_repeat Simple_repeat 2 84 0 5 978 288 0 0 0 chr17 51533667 51533699 -43738952 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 978 513 0 0 0 chr17 51533714 51533771 -43738880 + (TC)n Simple_repeat Simple_repeat 1 57 0 5 978 288 0 0 0 chr17 51533777 51533809 -43738842 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 978 268 310 114 15 chr17 51534095 51534226 -43738425 + MIRb SINE MIR 117 260 -8 5 978 325 318 64 0 chr17 51534803 51534913 -43737738 - MER58A DNA MER1_type -107 117 1 5 978 30 27 0 0 chr17 51535367 51535404 -43737247 + AT_rich Low_complexity Low_complexity 1 37 0 5 978 252 0 0 0 chr17 51537293 51537321 -43735330 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 978 210 150 0 0 chr17 51537712 51537752 -43734899 + (A)n Simple_repeat Simple_repeat 1 40 0 5 978 495 279 132 42 chr17 51540102 51540367 -43732284 - B4A SINE B4 -3 289 1 5 978 1209 147 54 0 chr17 51541642 51541826 -43730825 + B2_Mm2 SINE B2 1 194 -1 6 978 387 0 0 0 chr17 51542338 51542381 -43730270 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 6 978 880 235 21 69 chr17 51542749 51542982 -43729669 - ID_B1 SINE B4 0 224 3 6 978 369 206 69 49 chr17 51543981 51544083 -43728568 - MTEb LTR MaLR -12 367 264 6 978 338 143 16 0 chr17 51544152 51544215 -43728436 + G-rich Low_complexity Low_complexity 5 68 0 6 978 431 350 14 74 chr17 51544219 51544435 -43728216 - MTEb LTR MaLR -163 216 14 6 978 191 319 0 104 chr17 51544769 51544846 -43727805 - L2b LINE L2 -51 3324 3256 6 978 346 219 0 12 chr17 51545046 51545129 -43727522 + ID_B1 SINE B4 143 224 0 6 978 1407 93 6 6 chr17 51545325 51545508 -43727143 - B2_Mm2 SINE B2 -11 184 2 6 978 347 0 23 0 chr17 51546242 51546285 -43726366 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 978 237 216 20 0 chr17 51547904 51547955 -43724696 + C-rich Low_complexity Low_complexity 5 56 0 6 978 294 264 187 0 chr17 51548755 51548846 -43723805 + Arthur1B DNA Tip100 2 109 -1116 7 978 960 111 0 0 chr17 51549201 51549381 -43723270 + (TC)n Simple_repeat Simple_repeat 1 180 0 7 978 377 286 152 11 chr17 51549958 51550142 -43722509 + MIR SINE MIR 14 223 -39 7 978 27 29 0 0 chr17 51550570 51550604 -43722047 + AT_rich Low_complexity Low_complexity 1 34 0 7 978 195 42 0 0 chr17 51551033 51551057 -43721594 + (TG)n Simple_repeat Simple_repeat 2 25 0 7 978 245 290 56 28 chr17 51551548 51551619 -43721032 - MER5A DNA MER1_type -3 186 114 7 978 245 276 0 0 chr17 51551642 51551700 -43720951 - MER5A DNA MER1_type -116 73 16 7 978 239 243 29 0 chr17 51551843 51551913 -43720738 + GA-rich Low_complexity Low_complexity 6 77 0 7 978 456 209 110 0 chr17 51551997 51552088 -43720563 - PB1D9 SINE Alu -2 118 18 7 978 2100 259 86 57 chr17 51552160 51552183 -43720468 - RCHARR1 DNA MER1_type -253 721 707 7 978 1609 224 42 14 chr17 51552183 51552540 -43720111 + ORR1D1 LTR MaLR 4 370 -4 7 978 2100 259 86 57 chr17 51552540 51553217 -43719434 - RCHARR1 DNA MER1_type -268 706 1 7 978 611 284 54 103 chr17 51553222 51553446 -43719205 + B4A SINE B4 1 213 -79 8 978 323 263 92 30 chr17 51553561 51553745 -43718906 + MIRb SINE MIR 14 227 -41 8 978 457 376 77 0 chr17 51554175 51554345 -43718306 + B4A SINE B4 106 288 -4 8 978 3813 174 19 26 chr17 51554977 51555708 -43716943 + ORR1B1-int LTR MaLR 784 1509 0 8 978 1544 202 22 155 chr17 51555711 51556157 -43716494 + ORR1B1 LTR MaLR 8 394 0 8 978 578 402 32 3 chr17 51556531 51556813 -43715838 + LTR16E1 LTR ERVL 146 435 -103 8 978 406 253 0 0 chr17 51556863 51556958 -43715693 - PB1D10 SINE Alu 0 117 23 8 978 1690 64 0 22 chr17 51557094 51557318 -43715333 - L1_Mus2 LINE L1 0 6566 6348 8 978 315 268 146 0 chr17 51557528 51557651 -43715000 + MER3 DNA MER1_type 67 207 -2 8 978 282 56 0 0 chr17 51561001 51561037 -43711614 + (CA)n Simple_repeat Simple_repeat 1 36 0 8 978 340 236 140 9 chr17 51561072 51561179 -43711472 + B1F1 SINE Alu 21 141 -8 8 978 732 262 41 10 chr17 51561907 51562104 -43710547 - B3 SINE B2 -6 210 8 9 978 927 230 55 67 chr17 51563014 51563417 -43709234 + MT2A LTR ERVL 1 540 -61 9 978 270 188 23 23 chr17 51563419 51563506 -43709145 + (TTATA)n Simple_repeat Simple_repeat 3 89 0 9 978 241 274 16 0 chr17 51563604 51563666 -43708985 - MER102b DNA MER1_type -171 170 108 9 978 473 275 24 32 chr17 51564409 51564533 -43708118 + RSINE1 SINE B4 43 165 0 9 978 224 226 0 16 chr17 51564635 51564698 -43707953 + CT-rich Low_complexity Low_complexity 3 64 0 9 978 207 0 0 0 chr17 51566781 51566804 -43705847 + (TTG)n Simple_repeat Simple_repeat 2 24 0 9 978 191 125 25 0 chr17 51567008 51567048 -43705603 + (TGGGGG)n Simple_repeat Simple_repeat 1 41 0 9 978 379 235 0 12 chr17 51567097 51567179 -43705472 - B4 SINE B4 -211 81 1 9 978 376 188 0 0 chr17 51567341 51567405 -43705246 - MER63D DNA AcHobo -681 380 317 9 978 362 268 79 7 chr17 51568066 51568205 -43704446 + MLT1F2 LTR MaLR 15 163 -397 1 978 346 370 77 17 chr17 51568794 51569091 -43703560 + LTR33 LTR ERVL 199 513 -2 1 978 560 200 89 7 chr17 51569189 51569335 -43703316 + MER5A DNA MER1_type 1 158 -31 1 978 1038 110 0 0 chr17 51570208 51570363 -43702288 + (TTC)n Simple_repeat Simple_repeat 2 156 0 1 978 458 309 163 44 chr17 51570683 51570978 -43701673 - MLT1H LTR MaLR -113 436 107 1 978 1208 266 7 14 chr17 51571284 51571314 -43701337 - B4 SINE B4 0 292 265 1 978 378 0 0 0 chr17 51571314 51571356 -43701295 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 978 1208 266 7 14 chr17 51571356 51571619 -43701032 - B4 SINE B4 -28 264 1 1 978 243 231 31 0 chr17 51571750 51571815 -43700836 - PB1D10 SINE Alu 0 117 51 1 978 27 49 0 0 chr17 51572963 51573004 -43699647 + AT_rich Low_complexity Low_complexity 1 41 0 1 978 486 0 0 0 chr17 51573375 51573429 -43699222 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 978 2577 119 21 3 chr17 51574687 51575074 -43697577 + ORR1B1 LTR MaLR 1 394 0 1 978 539 248 107 13 chr17 51575628 51575827 -43696824 - L1MA4 LINE L1 -399 5901 5677 1 978 324 0 0 0 chr17 51575837 51575873 -43696778 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 1 978 855 262 92 7 chr17 51576162 51576454 -43696197 + MER58B DNA MER1_type 24 340 -1 1 978 450 0 0 0 chr17 51577217 51577267 -43695384 + (CAA)n Simple_repeat Simple_repeat 2 51 0 1 978 1296 169 88 34 chr17 51577647 51578001 -43694650 - ORR1D1 LTR MaLR -1 373 1 1 978 1711 210 60 12 chr17 51578133 51578533 -43694118 - MTD LTR MaLR 0 419 1 1 978 325 311 171 31 chr17 51578989 51579240 -43693411 - RLTR26 LTR ERVK -284 358 47 1 978 287 321 131 49 chr17 51581255 51581560 -43691091 + L1M3e LINE L1 61 390 -6640 1 978 703 185 93 0 chr17 51582005 51582156 -43690495 + MTE2a LTR MaLR 215 379 0 1 978 465 19 0 0 chr17 51582224 51582278 -43690373 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 978 229 141 154 90 chr17 51582309 51582387 -43690264 + L1M2 LINE L1 4685 4767 -1376 1 978 384 198 176 65 chr17 51582393 51582501 -43690150 + B3A SINE B2 2 121 -77 1 978 648 239 107 56 chr17 51582501 51582753 -43689898 - MT2B LTR ERVL -47 554 290 1 978 264 109 22 0 chr17 51582759 51582805 -43689846 - U2 snRNA snRNA -141 47 1 1 978 401 224 84 26 chr17 51582829 51582956 -43689695 - MT2B LTR ERVL -468 133 11 1 978 297 0 0 0 chr17 51583525 51583558 -43689093 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 978 475 315 52 18 chr17 51583607 51583879 -43688772 - B4A SINE B4 -11 281 1 1 978 1775 161 82 26 chr17 51584437 51584814 -43687837 - MTD LTR MaLR 0 419 22 1 978 306 318 57 31 chr17 51585409 51585568 -43687083 + MIRb SINE MIR 27 189 -79 1 978 523 266 9 107 chr17 51586180 51586395 -43686256 + B3A SINE B2 5 198 0 1 978 191 403 21 56 chr17 51587466 51587501 -43685150 + L2b LINE L2 3031 3063 -312 1 978 2025 110 68 3 chr17 51587501 51587793 -43684858 - RLTR10E LTR ERVK 0 311 1 1 978 191 403 21 56 chr17 51587793 51587899 -43684752 + L2b LINE L2 3064 3167 -208 1 978 219 69 0 0 chr17 51588507 51588536 -43684115 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1 978 629 187 79 24 chr17 51588536 51588662 -43683989 - B1_Mur4 SINE Alu -12 138 6 1 978 351 0 0 0 chr17 51589454 51589493 -43683158 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 978 348 24 0 0 chr17 51589685 51589726 -43682925 + (CTG)n Simple_repeat Simple_repeat 2 42 0 1 978 276 291 99 9 chr17 51589727 51589838 -43682813 + MT2A LTR ERVL 241 361 -172 1 978 817 264 48 6 chr17 51589857 51590197 -43682454 + Lx9 LINE L1 5629 5988 -1656 1 978 243 0 0 0 chr17 51590369 51590396 -43682255 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 978 2368 283 52 8 chr17 51590420 51591130 -43681521 + Lx9 LINE L1 6367 7107 -537 1 978 202 70 68 23 chr17 51591238 51591282 -43681369 + T-rich Low_complexity Low_complexity 3 48 0 1 978 1376 219 20 33 chr17 51591327 51591539 -43681112 - L1_Rod LINE L1 -3910 1937 1725 1 978 201 39 0 0 chr17 51591539 51591565 -43681086 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 978 1376 219 20 33 chr17 51591565 51591749 -43680902 - L1_Rod LINE L1 -4123 1724 1546 1 978 10759 130 52 7 chr17 51592038 51592101 -43680550 + L1_Mur2 LINE L1 3407 3469 -2408 1 978 197 33 0 32 chr17 51592101 51592132 -43680519 + (CAA)n Simple_repeat Simple_repeat 3 32 0 1 978 10759 130 52 7 chr17 51592132 51593879 -43678772 + L1_Mur2 LINE L1 3470 5298 -579 1 978 3811 163 67 21 chr17 51593878 51594579 -43678072 + Lx4B LINE L1 6322 7054 -4 1 978 1757 108 19 4 chr17 51594593 51594854 -43677797 + L1_Mur2 LINE L1 4731 4995 -882 1 978 340 310 0 0 chr17 51594869 51594956 -43677695 - RSINE1 SINE B4 -77 88 2 1 978 651 286 209 4 chr17 51595165 51595447 -43677204 + MER2 DNA MER2_type 1 340 -5 1 978 543 31 0 0 chr17 51597232 51597297 -43675354 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 978 530 311 90 107 chr17 51597440 51597555 -43675096 + MLT1F2 LTR MaLR 30 132 -428 1 978 423 243 9 61 chr17 51597555 51597669 -43674982 + PB1D10 SINE Alu 1 108 -9 1 978 360 0 0 0 chr17 51597670 51597710 -43674941 + (CAGA)n Simple_repeat Simple_repeat 1 40 0 1 978 530 311 90 107 chr17 51597710 51598002 -43674649 + MLT1F2 LTR MaLR 133 432 -128 1 978 716 359 59 23 chr17 51598284 51598726 -43673925 - MLT1H LTR MaLR -82 467 10 1 978 193 319 54 21 chr17 51598842 51598935 -43673716 + MIR SINE MIR 112 207 -55 1 978 511 298 30 20 chr17 51599540 51599739 -43672912 - B3 SINE B2 -14 202 2 1 978 198 0 0 0 chr17 51599816 51599838 -43672813 + (A)n Simple_repeat Simple_repeat 1 22 0 1 978 210 306 0 0 chr17 51600649 51600698 -43671953 + (CACG)n Simple_repeat Simple_repeat 2 50 0 1 978 297 0 0 0 chr17 51601540 51601573 -43671078 + (A)n Simple_repeat Simple_repeat 1 33 0 1 978 1886 147 86 3 chr17 51601614 51601963 -43670688 + ORR1C1 LTR MaLR 1 378 0 1 978 532 283 45 34 chr17 51602608 51602787 -43669864 - B3A SINE B2 -16 182 2 1 978 188 182 23 0 chr17 51602936 51602980 -43669671 + CT-rich Low_complexity Low_complexity 1 45 0 1 978 22 0 0 0 chr17 51603525 51603547 -43669104 + AT_rich Low_complexity Low_complexity 1 22 0 1 978 648 38 0 0 chr17 51603779 51603858 -43668793 + (GA)n Simple_repeat Simple_repeat 2 80 0 1 978 1803 293 94 8 chr17 51604009 51604602 -43668049 - Lx8 LINE L1 -377 7096 6453 1 978 3300 142 171 16 chr17 51604664 51605365 -43667286 + MTB_Mm-int LTR MaLR 449 1258 0 1 978 2262 170 20 15 chr17 51605365 51605770 -43666881 + MTB_Mm LTR MaLR 1 407 0 1 978 833 293 39 31 chr17 51605780 51606161 -43666490 - RMER5 LTR ERV1 -11 523 140 1 978 277 239 97 57 chr17 51606168 51606292 -43666359 - RMER5 LTR ERV1 -366 168 40 1 978 275 221 69 11 chr17 51606546 51606633 -43666018 - MTD LTR MaLR -2 417 326 1 978 1173 225 100 68 chr17 51606613 51606726 -43665925 - MTC-int LTR MaLR -118 1140 1045 1 978 2112 108 28 12 chr17 51606726 51607046 -43665605 + ORR1A2 LTR MaLR 1 325 -2 1 978 1173 225 100 68 chr17 51607046 51607371 -43665280 - MTC-int LTR MaLR -214 1044 688 1 978 397 277 10 10 chr17 51607379 51607481 -43665170 - B3 SINE B2 -113 103 2 1 978 939 167 128 5 chr17 51607482 51607669 -43664982 - MTD LTR MaLR -209 210 1 1 978 185 274 32 0 chr17 51608078 51608140 -43664511 - MER5B DNA MER1_type -108 70 7 1 978 949 161 11 28 chr17 51608934 51609113 -43663538 + B2_Mm2 SINE B2 2 177 -18 1 978 563 275 15 0 chr17 51609358 51609489 -43663162 - RSINE1 SINE B4 -29 136 4 1 978 447 183 112 9 chr17 51609791 51609907 -43662744 + MER2 DNA MER2_type 91 218 -127 1 978 471 272 9 0 chr17 51610189 51610303 -43662348 + PB1D10 SINE Alu 2 116 -1 1 978 310 29 0 0 chr17 51610305 51610340 -43662311 - Lx LINE L1 -660 5994 5960 1 978 3528 91 6 14 chr17 51610340 51610842 -43661809 + Lx LINE L1 6154 6651 -3 1 978 462 277 103 13 chr17 51611315 51611503 -43661148 - B3A SINE B2 -1 197 14 1 978 463 333 64 19 chr17 51611554 51611710 -43660941 - RSINE1 SINE B4 0 165 3 1 978 697 239 116 10 chr17 51612378 51612577 -43660074 + ID_B1 SINE B4 2 221 -3 1 978 281 347 0 0 chr17 51613739 51613811 -43658840 + PB1D10 SINE Alu 3 74 -43 1 978 729 288 14 32 chr17 51614106 51614157 -43658494 + B3 SINE B2 1 45 -171 1 978 4049 142 39 28 chr17 51614157 51614869 -43657782 + RMER6D LTR ERVK 1 720 0 1 978 729 288 14 32 chr17 51614869 51615036 -43657615 + B3 SINE B2 46 215 -1 1 978 195 162 0 0 chr17 51615268 51615305 -43657346 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 1 978 204 40 0 0 chr17 51615317 51615342 -43657309 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 978 428 213 228 8 chr17 51615357 51615480 -43657171 - B3A SINE B2 -47 151 2 1 978 250 333 0 0 chr17 51615597 51615660 -43656991 + FordPrefect_a DNA Tip100 58 120 -388 1 978 307 394 98 43 chr17 51615874 51616049 -43656602 + FordPrefect_a DNA Tip100 192 386 -122 1 978 3531 15 5 0 chr17 51616049 51616443 -43656208 - MTA_Mm LTR MaLR 0 396 1 1 978 307 394 98 43 chr17 51616443 51616522 -43656129 + FordPrefect_a DNA Tip100 387 460 -48 1 978 461 216 164 0 chr17 51616643 51616777 -43655874 + MTE2a LTR MaLR 216 371 -8 1 978 351 269 37 31 chr17 51617789 51617806 -43654845 + CYRA11_Mm Unknown Y-chromosome 155 172 -445 1 978 893 156 98 0 chr17 51617806 51617979 -43654672 - URR1A DNA MER1_type 0 226 37 1 978 224 189 0 0 chr17 51618583 51618620 -43654031 + polypurine Low_complexity Low_complexity 2 38 0 1 978 441 0 0 0 chr17 51618705 51618754 -43653897 + (CAAAAA)n Simple_repeat Simple_repeat 2 50 0 1 978 387 0 0 0 chr17 51618973 51619016 -43653635 + (T)n Simple_repeat Simple_repeat 1 43 0 1 978 285 247 40 23 chr17 51619312 51619465 -43653186 + MIRc SINE MIR 17 172 -96 1 978 249 366 0 8 chr17 51620927 51621051 -43651600 + Lx8 LINE L1 6968 7090 -383 1 978 3541 61 11 0 chr17 51621094 51621537 -43651114 + L1_Mm LINE L1 5138 5585 -298 1 978 829 324 49 54 chr17 51621522 51621538 -43651113 + Lx8 LINE L1 7065 7080 -393 1 978 7886 54 0 33 chr17 51621538 51622556 -43650095 + L1Md_F2 LINE L1 5587 6570 -12 1 978 829 324 49 54 chr17 51622556 51622947 -43649704 + Lx8 LINE L1 7081 7469 -4 1 978 295 312 127 8 chr17 51623200 51623326 -43649325 + MLT1A1 LTR MaLR 10 150 -258 1 978 299 316 0 0 chr17 51624085 51624183 -43648468 + MLT1A1 LTR MaLR 310 407 -1 1 978 1121 252 107 29 chr17 51624216 51624563 -43648088 + MTEa LTR MaLR 1 374 -5 1 978 6986 67 3 19 chr17 51624563 51625479 -43647172 + L1_Mus1 LINE L1 5664 6565 -2 2 978 354 23 0 0 chr17 51626764 51626807 -43645844 + (CAA)n Simple_repeat Simple_repeat 2 44 0 2 978 381 140 27 36 chr17 51627231 51627342 -43645309 + GA-rich Low_complexity Low_complexity 2 111 0 2 978 22 0 0 0 chr17 51627797 51627819 -43644832 + AT_rich Low_complexity Low_complexity 1 22 0 2 978 242 242 86 2 chr17 51628917 51628998 -43643653 - MIR SINE MIR 0 268 179 2 978 534 279 169 70 chr17 51629619 51629754 -43642897 + MTEa LTR MaLR 1 169 -210 2 978 459 0 0 0 chr17 51629754 51629805 -43642846 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 978 534 279 169 70 chr17 51629805 51630012 -43642639 + MTEa LTR MaLR 170 377 -2 2 978 29 60 0 0 chr17 51630496 51630546 -43642105 + AT_rich Low_complexity Low_complexity 1 50 0 2 978 23 0 0 0 chr17 51630583 51630606 -43642045 + AT_rich Low_complexity Low_complexity 1 23 0 2 978 268 274 81 23 chr17 51630611 51630697 -43641954 + MT2B LTR ERVL 169 259 -342 2 978 575 184 18 0 chr17 51630629 51630738 -43641913 + B1_Mur1 SINE Alu 37 147 -2 2 978 25 0 0 0 chr17 51631108 51631133 -43641518 + AT_rich Low_complexity Low_complexity 1 25 0 2 978 345 47 0 0 chr17 51631316 51631359 -43641292 + (TATG)n Simple_repeat Simple_repeat 2 44 0 2 978 1236 192 22 36 chr17 51631359 51631634 -43641017 - Lx9 LINE L1 -162 7482 7212 2 978 560 156 0 53 chr17 51633453 51633474 -43639177 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 978 204 40 0 0 chr17 51633474 51633499 -43639152 + (GTGTG)n Simple_repeat Simple_repeat 1 25 0 2 978 560 152 15 37 chr17 51633499 51633767 -43638884 + (TG)n Simple_repeat Simple_repeat 1 262 0 2 978 898 279 38 28 chr17 51633776 51634064 -43638587 - B4A SINE B4 0 292 2 2 978 218 75 0 48 chr17 51635203 51635245 -43637406 + (CAGAGA)n Simple_repeat Simple_repeat 3 42 0 2 978 350 230 108 20 chr17 51636984 51637086 -43635565 + MER102b DNA MER1_type 71 181 -160 2 978 250 196 0 0 chr17 51637170 51637216 -43635435 + MER5A DNA MER1_type 114 159 -30 2 978 692 119 64 0 chr17 51637396 51637505 -43635146 - B3A SINE B2 -78 120 5 2 978 408 251 83 7 chr17 51637686 51637809 -43634842 - B3A SINE B2 -70 125 1 2 978 342 276 116 16 chr17 51637830 51637857 -43634794 - ID_B1 SINE B4 -3 221 82 2 978 397 235 30 20 chr17 51637857 51637957 -43634694 - B1F1 SINE Alu -48 101 1 2 978 190 75 0 70 chr17 51640828 51640871 -43631780 + (TGGGGG)n Simple_repeat Simple_repeat 3 42 0 2 978 459 0 0 0 chr17 51641640 51641691 -43630960 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 978 428 323 94 0 chr17 51641703 51641830 -43630821 - RSINE1 SINE B4 -24 141 3 2 979 273 319 72 42 chr17 51642728 51642895 -43629756 - LTR16E1 LTR ERVL -5 533 362 2 979 548 289 58 11 chr17 51644475 51644664 -43627987 + B3A SINE B2 1 198 0 2 979 441 0 0 0 chr17 51644780 51644829 -43627822 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 979 1575 161 12 54 chr17 51645107 51645442 -43627209 - ORR1A4 LTR MaLR -8 321 1 2 979 1548 238 40 49 chr17 51645718 51646165 -43626486 + RMER19C LTR ERVK 169 611 0 2 979 23 0 0 0 chr17 51646855 51646878 -43625773 + AT_rich Low_complexity Low_complexity 1 23 0 2 979 25 65 0 0 chr17 51646919 51646965 -43625686 + AT_rich Low_complexity Low_complexity 1 46 0 2 979 477 0 0 0 chr17 51646984 51647037 -43625614 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 2 979 508 235 83 45 chr17 51647381 51647537 -43625114 - RSINE1 SINE B4 0 165 4 2 979 195 121 0 57 chr17 51647941 51647976 -43624675 + MIR SINE MIR 81 113 -149 2 979 459 285 85 0 chr17 51648212 51648342 -43624309 + RSINE1 SINE B4 1 141 -24 2 979 279 0 0 0 chr17 51648365 51648396 -43624255 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 979 389 208 188 0 chr17 51648452 51648553 -43624098 - ID_B1 SINE B4 -7 217 98 2 979 227 259 43 120 chr17 51648833 51648925 -43623726 - MTEa LTR MaLR -289 90 6 2 979 385 273 0 0 chr17 51648963 51649051 -43623600 - MLT1D LTR MaLR -89 416 329 2 979 2084 101 109 0 chr17 51649399 51649747 -43622904 + ORR1B1 LTR MaLR 1 386 -8 2 979 24 32 0 0 chr17 51650234 51650265 -43622386 + AT_rich Low_complexity Low_complexity 1 31 0 2 979 231 36 0 0 chr17 51650459 51650487 -43622164 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 979 405 0 0 0 chr17 51651147 51651192 -43621459 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 979 27 0 0 0 chr17 51651297 51651324 -43621327 + AT_rich Low_complexity Low_complexity 1 27 0 2 979 275 291 0 44 chr17 51651701 51651791 -43620860 - MTEb LTR MaLR 0 379 294 2 979 250 349 90 53 chr17 51651866 51651999 -43620652 - MTEb LTR MaLR -180 179 42 2 979 506 257 0 0 chr17 51652355 51652468 -43620183 - B3 SINE B2 -56 160 48 2 979 414 0 0 0 chr17 51653239 51653285 -43619366 + (TC)n Simple_repeat Simple_repeat 1 46 0 2 979 324 0 0 0 chr17 51653285 51653320 -43619331 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 979 722 270 86 17 chr17 51653461 51653751 -43618900 - MER33 DNA MER1_type -9 315 6 2 979 361 299 17 8 chr17 51654249 51654367 -43618284 + RSINE1 SINE B4 2 120 -45 2 979 3212 68 0 0 chr17 51654367 51654763 -43617888 + L1_Mus1 LINE L1 6171 6566 -1 2 979 22 0 0 0 chr17 51654783 51654805 -43617846 + AT_rich Low_complexity Low_complexity 1 22 0 2 979 279 0 0 0 chr17 51654973 51655004 -43617647 + (CAA)n Simple_repeat Simple_repeat 2 32 0 2 979 297 135 0 37 chr17 51655072 51655126 -43617525 - B1F SINE Alu -5 144 93 2 979 622 254 81 30 chr17 51655237 51655472 -43617179 + B4A SINE B4 1 247 -45 2 979 226 279 16 0 chr17 51655512 51655573 -43617078 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 979 297 0 0 0 chr17 51658788 51658821 -43613830 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 979 246 105 0 0 chr17 51658917 51658955 -43613696 + (TGG)n Simple_repeat Simple_repeat 1 38 0 2 979 441 297 53 26 chr17 51659648 51659838 -43612813 - MER3 DNA MER1_type 0 209 15 2 979 224 284 32 54 chr17 51660557 51660650 -43612001 + L2b LINE L2 3066 3156 -219 2 979 188 376 0 11 chr17 51661092 51661186 -43611465 + L2b LINE L2 3243 3335 -40 2 979 1979 163 10 73 chr17 51661851 51662249 -43610402 + ORR1C1 LTR MaLR 4 376 -2 2 979 181 337 56 11 chr17 51662320 51662410 -43610241 + MIRb SINE MIR 109 202 -66 2 979 3448 61 0 0 chr17 51662816 51663241 -43609410 + L1_Mus2 LINE L1 6142 6566 0 2 979 284 289 64 26 chr17 51663461 51663617 -43609034 + Charlie18a DNA MER1_type 40 201 -141 2 979 203 0 37 0 chr17 51663746 51663773 -43608878 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 979 342 0 0 0 chr17 51663921 51663959 -43608692 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 979 183 184 0 0 chr17 51664345 51664383 -43608268 + CT-rich Low_complexity Low_complexity 4 41 0 2 979 401 228 17 28 chr17 51664415 51664591 -43608060 + CT-rich Low_complexity Low_complexity 1 174 0 2 979 224 218 19 29 chr17 51665020 51665124 -43607527 + (CATATA)n Simple_repeat Simple_repeat 3 105 0 2 979 481 298 130 42 chr17 51665268 51665506 -43607145 + B4 SINE B4 34 292 0 2 979 183 170 0 0 chr17 51665507 51665554 -43607097 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 979 465 19 0 0 chr17 51666461 51666515 -43606136 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 979 498 33 0 0 chr17 51667108 51667168 -43605483 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 979 243 0 0 0 chr17 51667168 51667195 -43605456 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 979 913 298 74 33 chr17 51668133 51668654 -43603997 - L1ME1 LINE L1 -285 5898 5356 2 979 371 267 144 35 chr17 51668732 51669025 -43603626 - MTEa LTR MaLR -30 349 1 2 979 254 173 36 47 chr17 51669026 51669170 -43603481 - L1M5 LINE L1 -845 5334 5192 2 979 504 245 22 32 chr17 51669168 51669357 -43603294 - L1MA8 LINE L1 0 6291 6103 2 979 489 283 149 16 chr17 51669361 51669609 -43603042 + B4A SINE B4 1 281 -11 2 979 324 0 0 0 chr17 51669639 51669675 -43602976 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 979 531 45 0 0 chr17 51669680 51669746 -43602905 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 2 979 278 236 67 0 chr17 51669802 51669891 -43602760 - L1MA8 LINE L1 -223 6068 5974 2 979 344 310 131 80 chr17 51669863 51670350 -43602301 - L1M5 LINE L1 -939 5207 4696 2 979 313 309 133 39 chr17 51671775 51672031 -43600620 + B4 SINE B4 1 280 -12 2 979 1220 28 7 0 chr17 51672167 51672309 -43600342 - B1_Mus2 SINE Alu 0 147 5 2 979 488 290 121 40 chr17 51672760 51673008 -43599643 + B4A SINE B4 4 271 -21 2 979 699 52 0 0 chr17 51673043 51673139 -43599512 + (CA)n Simple_repeat Simple_repeat 1 96 0 2 979 22 35 0 0 chr17 51673270 51673299 -43599352 + AT_rich Low_complexity Low_complexity 1 29 0 2 979 513 0 0 0 chr17 51675417 51675474 -43597177 + (TC)n Simple_repeat Simple_repeat 1 57 0 2 979 303 127 0 0 chr17 51675571 51675634 -43597017 + (TG)n Simple_repeat Simple_repeat 1 63 0 2 979 192 125 0 0 chr17 51675729 51675761 -43596890 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 979 404 37 19 0 chr17 51675913 51675967 -43596684 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 979 474 18 0 0 chr17 51676665 51676720 -43595931 + (TC)n Simple_repeat Simple_repeat 2 56 0 2 979 405 0 0 0 chr17 51676720 51676764 -43595887 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 979 593 264 5 84 chr17 51678209 51678399 -43594252 - B3A SINE B2 -22 176 2 2 979 216 200 0 0 chr17 51678958 51679003 -43593648 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 979 680 258 6 18 chr17 51679033 51679199 -43593452 - B3A SINE B2 -33 165 2 2 979 343 364 12 41 chr17 51679319 51679488 -43593163 + RSINE1 SINE B4 2 165 0 2 979 234 0 0 0 chr17 51679873 51679899 -43592752 + (T)n Simple_repeat Simple_repeat 1 26 0 2 979 311 323 92 0 chr17 51680325 51680455 -43592196 - B1F SINE Alu -7 142 1 3 979 552 267 19 32 chr17 51680455 51680496 -43592155 - ID SINE ID -140 84 46 3 979 236 295 13 0 chr17 51681465 51681543 -43591108 - MLT1G3 LTR MaLR -13 582 504 3 979 262 284 0 0 chr17 51681715 51681782 -43590869 - B4A SINE B4 -63 229 163 3 979 216 0 0 0 chr17 51681805 51681829 -43590822 + (A)n Simple_repeat Simple_repeat 1 24 0 3 979 364 237 71 10 chr17 51682654 51682752 -43589899 + PB1D9 SINE Alu 5 108 -12 3 979 594 0 0 0 chr17 51682763 51682829 -43589822 + (CAAAC)n Simple_repeat Simple_repeat 5 70 0 3 979 459 356 12 24 chr17 51682914 51683078 -43589573 - RSINE1 SINE B4 -2 163 2 3 979 590 60 12 0 chr17 51683908 51683991 -43588660 + (TCTA)n Simple_repeat Simple_repeat 3 86 0 3 979 358 346 8 23 chr17 51683998 51684131 -43588520 - ID_B1 SINE B4 -10 214 84 3 979 308 263 26 0 chr17 51684520 51684596 -43588055 + ORR1E LTR MaLR 24 101 -258 3 979 618 14 0 0 chr17 51687383 51687454 -43585197 + (CTG)n Simple_repeat Simple_repeat 1 71 0 3 979 495 0 0 0 chr17 51688036 51688091 -43584560 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 979 266 295 12 25 chr17 51688110 51688190 -43584461 - RSINE1 SINE B4 -22 143 65 3 979 398 304 43 26 chr17 51688541 51688656 -43583995 - RSINE1 SINE B4 -46 119 3 3 979 416 227 8 0 chr17 51688688 51688807 -43583844 + (CATATA)n Simple_repeat Simple_repeat 3 122 0 3 979 184 326 34 23 chr17 51689613 51689701 -43582950 - L3 LINE CR1 -186 4303 4215 3 979 331 300 40 0 chr17 51690090 51690190 -43582461 - RSINE1 SINE B4 -35 130 27 3 979 215 237 17 0 chr17 51690396 51690455 -43582196 + A-rich Low_complexity Low_complexity 1 60 0 3 979 294 29 0 0 chr17 51691126 51691161 -43581490 + (TC)n Simple_repeat Simple_repeat 2 36 0 3 979 305 82 20 0 chr17 51691161 51691209 -43581442 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 979 255 314 68 74 chr17 51691269 51691417 -43581234 + B1F1 SINE Alu 3 149 0 3 979 233 240 0 20 chr17 51691432 51691483 -43581168 + ID4_ SINE ID 25 74 -9 3 979 200 328 15 15 chr17 51692315 51692380 -43580271 + MER5A DNA MER1_type 113 177 -12 3 979 313 205 77 0 chr17 51692930 51693008 -43579643 + RLTR28 LTR ERVL 4 87 -437 3 979 641 187 0 7 chr17 51693012 51693147 -43579504 + GA-rich Low_complexity Low_complexity 3 136 0 3 979 1631 161 23 105 chr17 51693149 51693539 -43579112 + RLTR28 LTR ERVL 83 440 -84 3 979 2030 153 96 14 chr17 51694434 51694798 -43577853 + ORR1B1 LTR MaLR 1 394 0 3 979 951 231 14 14 chr17 51695056 51695267 -43577384 + B3 SINE B2 1 211 -5 3 979 949 198 8 73 chr17 51698594 51698897 -43573754 - RLTR26 LTR ERVK -631 275 1 3 979 696 145 0 0 chr17 51698959 51699104 -43573547 + (TG)n Simple_repeat Simple_repeat 2 146 0 3 979 513 335 64 0 chr17 51699152 51699370 -43573281 - MLT2B5 LTR ERVL -289 312 81 3 979 279 323 21 0 chr17 51699422 51699515 -43573136 + MIR SINE MIR 134 228 -34 3 979 3497 28 2 0 chr17 51700492 51700887 -43571764 - MTA_Mm LTR MaLR 0 396 1 3 979 267 136 0 0 chr17 51702322 51702381 -43570270 + (A)n Simple_repeat Simple_repeat 1 59 0 3 979 954 241 102 102 chr17 51702763 51703137 -43569514 + MTE2a LTR MaLR 1 374 -5 3 979 343 209 33 0 chr17 51703226 51703317 -43569334 + Lx6 LINE L1 7362 7455 -5 3 979 812 173 0 14 chr17 51703338 51703560 -43569091 + GA-rich Low_complexity Low_complexity 1 218 0 3 979 1180 86 6 6 chr17 51703560 51703736 -43568915 + (GAA)n Simple_repeat Simple_repeat 3 178 0 3 979 683 226 35 79 chr17 51704323 51704525 -43568126 - B3A SINE B2 -4 194 2 3 979 459 0 0 0 chr17 51705287 51705338 -43567313 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 979 316 335 32 49 chr17 51705619 51705804 -43566847 - MER3 DNA MER1_type -26 183 2 3 979 1090 55 14 14 chr17 51706166 51706313 -43566338 - B1_Mm SINE Alu 0 147 1 3 979 1153 90 14 5 chr17 51707047 51707259 -43565392 + (TTCC)n Simple_repeat Simple_repeat 1 213 0 3 979 929 119 17 17 chr17 51707261 51707440 -43565211 + CT-rich Low_complexity Low_complexity 1 179 0 3 979 217 100 0 0 chr17 51707443 51707473 -43565178 + (TCCC)n Simple_repeat Simple_repeat 4 33 0 3 979 413 278 76 46 chr17 51707529 51707767 -43564884 + L1ME2z LINE L1 5837 6081 -363 3 979 726 272 87 42 chr17 51707846 51708111 -43564540 + B4 SINE B4 15 291 -1 3 979 365 316 111 32 chr17 51708158 51708410 -43564241 - L1MEg LINE L1 -4747 1337 1066 3 979 374 215 61 61 chr17 51708717 51708816 -43563835 + PB1D10 SINE Alu 1 99 -18 3 979 2199 102 14 58 chr17 51709362 51709706 -43562945 + ORR1A4 LTR MaLR 1 329 0 3 979 488 260 6 45 chr17 51710085 51710242 -43562409 - MamRep1879 DNA hAT? -57 159 9 3 979 588 29 0 0 chr17 51710748 51710818 -43561833 + (GA)n Simple_repeat Simple_repeat 1 70 0 3 979 1209 262 100 30 chr17 51710910 51711371 -43561280 + Lx8 LINE L1 6979 7471 -2 3 979 24 32 0 0 chr17 51711371 51711402 -43561249 + AT_rich Low_complexity Low_complexity 1 31 0 3 979 497 269 19 42 chr17 51712159 51712416 -43560235 - RMER15 LTR ERVL -177 398 28 3 979 207 209 0 0 chr17 51712443 51712486 -43560165 + (TTTAA)n Simple_repeat Simple_repeat 4 46 0 3 979 712 301 14 0 chr17 51713093 51713312 -43559339 + ID_B1 SINE B4 1 222 -2 3 979 304 165 239 11 chr17 51713427 51713519 -43559132 - B1_Mur2 SINE Alu -2 147 35 3 979 1840 140 57 31 chr17 51713537 51713890 -43558761 + ORR1B2 LTR MaLR 1 362 -5 3 979 328 250 55 15 chr17 51714599 51714714 -43557937 - PB1D10 SINE Alu -30 119 3 3 979 503 199 83 8 chr17 51714726 51714858 -43557793 - L1MA7 LINE L1 -26 6265 6124 3 979 350 262 28 9 chr17 51715033 51715141 -43557510 - L1MA7 LINE L1 -305 6007 5898 3 979 432 55 0 0 chr17 51715537 51715592 -43557059 + (TATG)n Simple_repeat Simple_repeat 2 56 0 3 979 601 154 24 0 chr17 51715636 51715759 -43556892 + (CATA)n Simple_repeat Simple_repeat 2 127 0 3 979 978 128 139 35 chr17 51715759 51715917 -43556734 + URR1A DNA MER1_type 1 186 -40 3 979 2723 51 102 3 chr17 51715917 51716291 -43556360 + RLTR10A LTR ERVK 1 411 0 3 979 978 128 139 35 chr17 51716291 51716334 -43556317 + URR1A DNA MER1_type 187 223 -3 3 979 1020 154 21 5 chr17 51716343 51716532 -43556119 - MT2A LTR ERVL -341 192 1 3 979 641 271 6 33 chr17 51716545 51716728 -43555923 - B3A SINE B2 -14 184 7 3 979 217 48 71 0 chr17 51717092 51717134 -43555517 + (TTTTTG)n Simple_repeat Simple_repeat 3 47 0 3 979 246 241 115 0 chr17 51719107 51719194 -43553457 - B3A SINE B2 -48 150 54 3 979 643 216 52 0 chr17 51720041 51720175 -43552476 + RSINE1 SINE B4 11 151 -14 3 979 180 0 0 0 chr17 51720189 51720209 -43552442 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 979 288 0 0 0 chr17 51720228 51720260 -43552391 + (TAGA)n Simple_repeat Simple_repeat 3 34 0 3 979 550 156 18 0 chr17 51720309 51720476 -43552175 + (TAGA)n Simple_repeat Simple_repeat 3 172 0 3 979 1080 27 20 0 chr17 51720514 51720662 -43551989 + (TAGA)n Simple_repeat Simple_repeat 3 153 0 3 979 3284 174 131 79 chr17 51720975 51721833 -43550818 - RMER19B LTR ERVK 0 902 1 3 979 188 154 19 0 chr17 51722359 51722411 -43550240 + (TTG)n Simple_repeat Simple_repeat 2 54 0 3 979 376 183 122 84 chr17 51723787 51723918 -43548733 + HAL1-3A_ME LINE L1 1975 2110 -748 3 979 510 17 0 0 chr17 51724181 51724240 -43548411 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 979 207 0 0 0 chr17 51724579 51724602 -43548049 + (G)n Simple_repeat Simple_repeat 1 23 0 3 979 534 338 125 12 chr17 51725195 51725435 -43547216 + B4A SINE B4 3 269 -23 3 979 386 94 16 0 chr17 51725435 51725499 -43547152 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 979 1110 218 10 14 chr17 51725574 51725783 -43546868 + B3 SINE B2 8 215 -1 3 979 888 289 94 12 chr17 51727538 51727877 -43544774 + ORR1D2 LTR MaLR 1 367 -3 3 979 349 307 14 35 chr17 51727880 51728025 -43544626 - ORR1D2 LTR MaLR -31 339 198 3 979 1326 263 27 40 chr17 51728051 51728427 -43544224 + Lx5 LINE L1 6644 7014 -36 3 979 338 281 78 11 chr17 51728497 51728587 -43544064 - ORR1D2 LTR MaLR -255 104 9 3 979 1264 35 0 14 chr17 51728718 51728865 -43543786 + B1_Mus2 SINE Alu 2 146 -1 3 979 216 97 0 0 chr17 51728866 51728897 -43543754 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 3 979 478 342 68 34 chr17 51729157 51729481 -43543170 - MLT1L LTR MaLR -256 354 20 3 979 583 317 49 18 chr17 51729518 51729682 -43542969 + ID_B1 SINE B4 8 176 -48 3 979 2716 209 192 30 chr17 51729701 51730467 -43542184 - RMER19B LTR ERVK -12 890 1 3 979 314 175 48 0 chr17 51730510 51730613 -43542038 + GA-rich Low_complexity Low_complexity 2 109 0 3 979 796 279 50 31 chr17 51731603 51731992 -43540659 - L1M3 LINE L1 -805 5369 4970 3 979 207 100 0 0 chr17 51732287 51732317 -43540334 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 979 565 229 0 27 chr17 51732403 51732587 -43540064 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 3 979 198 0 0 0 chr17 51732911 51732933 -43539718 + (TCC)n Simple_repeat Simple_repeat 1 22 0 3 979 456 117 0 0 chr17 51732933 51733010 -43539641 + (CAT)n Simple_repeat Simple_repeat 3 79 0 3 979 357 352 20 52 chr17 51733656 51733809 -43538842 + B1F1 SINE Alu 1 148 -1 3 979 498 322 7 33 chr17 51733930 51734081 -43538570 - ID_B1 SINE B4 0 224 78 3 979 312 70 0 0 chr17 51735640 51735683 -43536968 + (TTG)n Simple_repeat Simple_repeat 3 45 0 3 979 332 337 33 0 chr17 51735693 51735785 -43536866 - B1F2 SINE Alu -54 95 1 3 979 2529 153 37 0 chr17 51736609 51736989 -43535662 + ORR1B1 LTR MaLR 1 394 0 3 979 616 313 0 52 chr17 51737020 51737192 -43535459 - RSINE1 SINE B4 0 165 3 3 979 4470 77 0 7 chr17 51737215 51737834 -43534817 - L1Md_F2 LINE L1 0 6582 5992 4 979 31137 76 4 4 chr17 51737825 51742102 -43530549 - L1Md_F2 LINE L1 -557 5326 1047 4 979 2423 147 99 0 chr17 51742102 51742525 -43530126 - L1Md_F2 LINE L1 -5743 873 409 4 979 234 0 0 0 chr17 51742565 51742591 -43530060 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 979 548 280 0 17 chr17 51742591 51742711 -43529940 - RSINE1 SINE B4 -41 124 7 4 979 409 295 195 0 chr17 51742809 51742958 -43529693 + MER20 DNA MER1_type 5 182 -37 4 979 360 324 29 58 chr17 51743114 51743428 -43529223 + MTEa LTR MaLR 3 355 -24 4 979 270 0 0 0 chr17 51744588 51744618 -43528033 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 979 1674 227 82 70 chr17 51744794 51745553 -43527098 + Lx6 LINE L1 314 1368 -4512 4 979 203 0 37 0 chr17 51745553 51745580 -43527071 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 4 979 943 185 123 30 chr17 51745580 51745720 -43526931 + Lx6 LINE L1 1369 1530 -4350 4 979 18805 170 29 51 chr17 51745724 51746917 -43525734 + Lx6 LINE L1 1890 2995 -2885 4 979 396 0 0 0 chr17 51746917 51746961 -43525690 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 4 979 18805 170 29 51 chr17 51746961 51748167 -43524484 + Lx6 LINE L1 2996 4213 -1667 4 979 180 0 0 0 chr17 51748167 51748187 -43524464 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 979 18805 170 29 51 chr17 51748187 51748257 -43524394 + Lx6 LINE L1 4214 4277 -1603 4 979 198 0 0 0 chr17 51748257 51748279 -43524372 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 4 979 18805 170 29 51 chr17 51748279 51749691 -43522960 + Lx6 LINE L1 4278 5687 -193 4 979 2018 146 3 86 chr17 51749691 51750050 -43522601 + ORR1A4 LTR MaLR 1 329 0 4 979 18805 166 75 16 chr17 51750050 51750446 -43522205 + Lx6 LINE L1 5688 6119 -1341 4 979 463 210 161 47 chr17 51750467 51750618 -43522033 + RMER20B LTR ERVK 1 159 -357 4 979 662 294 137 13 chr17 51750750 51751060 -43521591 + RMER20B LTR ERVK 149 489 -27 4 979 3939 244 106 68 chr17 51751068 51752329 -43520322 + Lx6 LINE L1 6134 7441 -19 4 979 369 0 0 0 chr17 51752329 51752370 -43520281 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 979 21 0 0 0 chr17 51752429 51752450 -43520201 + AT_rich Low_complexity Low_complexity 1 21 0 4 979 568 218 69 46 chr17 51752452 51752582 -43520069 + B1_Mur1 SINE Alu 2 134 -15 4 979 407 339 60 57 chr17 51753488 51754135 -43518516 + L1M6 LINE L1 859 1507 -4989 4 979 920 288 66 35 chr17 51754136 51754525 -43518126 + MTE2a LTR MaLR 1 419 0 4 979 556 309 53 7 chr17 51754749 51754899 -43517752 + B3 SINE B2 50 206 -10 4 979 226 0 59 0 chr17 51756454 51756488 -43516163 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 4 979 222 245 0 0 chr17 51756920 51756969 -43515682 + PB1D9 SINE Alu 71 119 -1 4 979 28 29 0 0 chr17 51757152 51757187 -43515464 + AT_rich Low_complexity Low_complexity 1 35 0 4 979 225 0 0 0 chr17 51757381 51757406 -43515245 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 979 285 296 58 48 chr17 51758071 51758174 -43514477 + L2b LINE L2 3272 3375 0 4 979 281 231 43 32 chr17 51758187 51758281 -43514370 + L1M5 LINE L1 3848 3942 -2204 4 979 382 298 93 29 chr17 51758715 51758894 -43513757 - MLT1G LTR MaLR -357 198 11 4 979 399 316 15 8 chr17 51759520 51759654 -43512997 + ID_B1 SINE B4 88 222 -2 4 979 203 196 59 0 chr17 51759870 51759921 -43512730 + GA-rich Low_complexity Low_complexity 4 57 0 4 979 272 217 176 24 chr17 51760193 51760278 -43512373 + PB1 SINE Alu 30 127 0 4 979 337 221 180 6 chr17 51760294 51760428 -43512223 - MER33 DNA MER1_type -22 302 157 4 979 1156 246 50 120 chr17 51760656 51761040 -43511611 - ORR1D2 LTR MaLR -13 357 1 4 979 338 300 105 69 chr17 51762358 51762605 -43510046 - HAL1-3A_ME LINE L1 -317 2541 2286 4 979 3285 156 7 28 chr17 51762673 51763212 -43509439 - RLTR11A LTR ERVK 0 528 1 4 979 1236 264 28 76 chr17 51763353 51763746 -43508905 - MTEa LTR MaLR 0 379 6 4 979 267 321 106 7 chr17 51763748 51763889 -43508762 - MER5A1 DNA MER1_type 0 166 12 4 979 26 50 0 0 chr17 51763913 51763953 -43508698 + AT_rich Low_complexity Low_complexity 1 40 0 4 979 864 261 49 72 chr17 51764307 51764695 -43507956 - Charlie4a DNA MER1_type -15 493 115 4 979 237 65 0 0 chr17 51764802 51764833 -43507818 + (TCC)n Simple_repeat Simple_repeat 3 33 0 4 979 259 312 25 0 chr17 51764874 51764954 -43507697 - L1MD2 LINE L1 -6084 463 382 4 979 337 282 24 6 chr17 51764960 51765115 -43507536 + B4A SINE B4 2 207 -85 4 979 519 243 40 27 chr17 51766001 51766149 -43506502 + RSINE1 SINE B4 16 165 0 4 979 317 189 260 38 chr17 51767111 51767233 -43505418 + B4 SINE B4 2 138 -86 4 979 238 283 47 66 chr17 51767293 51767399 -43505252 - RMER12 LTR ERVK -479 843 740 4 979 4353 186 122 49 chr17 51767402 51768367 -43504284 + RMER1B Other Other 30 1065 -1 4 979 1431 227 92 25 chr17 51769338 51769601 -43503050 - MTD LTR MaLR 0 419 126 4 979 357 24 0 0 chr17 51769601 51769643 -43503008 + (CAAT)n Simple_repeat Simple_repeat 3 44 0 4 979 1431 227 92 25 chr17 51769643 51769772 -43502879 - MTD LTR MaLR -294 125 2 4 979 708 74 0 0 chr17 51770213 51770308 -43502343 + (CA)n Simple_repeat Simple_repeat 2 96 0 4 979 312 308 13 0 chr17 51770368 51770446 -43502205 - ID4_ SINE ID -1 82 4 4 979 239 263 69 29 chr17 51770500 51770602 -43502049 + L1MA6 LINE L1 6178 6283 -17 4 979 188 150 0 32 chr17 51770604 51770666 -43501985 + T-rich Low_complexity Low_complexity 4 63 0 4 979 1132 50 42 21 chr17 51770666 51770809 -43501842 - B1_Mm SINE Alu 0 147 2 4 979 233 229 0 20 chr17 51770883 51770932 -43501719 + GA-rich Low_complexity Low_complexity 3 50 0 4 979 546 16 0 0 chr17 51771040 51771103 -43501548 + (GA)n Simple_repeat Simple_repeat 2 64 0 4 979 250 253 67 0 chr17 51772174 51772249 -43500402 + B4A SINE B4 213 292 0 4 979 251 342 70 9 chr17 51772302 51772316 -43500335 - B4A SINE B4 -87 205 88 4 979 376 260 31 10 chr17 51772316 51772413 -43500238 - B1F1 SINE Alu -48 101 3 4 979 781 323 45 17 chr17 51772413 51772759 -43499892 + ORR1E LTR MaLR 1 375 -4 4 980 523 264 352 33 chr17 51773848 51774127 -43498524 - ORR1D2 LTR MaLR -2 368 1 4 980 606 338 23 64 chr17 51774625 51774971 -43497680 - MLT2C2 LTR ERVL -54 343 19 4 980 310 236 30 18 chr17 51775512 51775680 -43496971 + CT-rich Low_complexity Low_complexity 1 170 0 4 980 221 260 67 27 chr17 51775717 51775792 -43496859 - ID_B1 SINE B4 -127 97 20 4 980 580 281 35 61 chr17 51775826 51776023 -43496628 - B3A SINE B2 -5 193 2 4 980 283 254 127 32 chr17 51776571 51776697 -43495954 - MIRc SINE MIR -81 187 50 4 980 419 0 20 0 chr17 51777006 51777057 -43495594 + (GA)n Simple_repeat Simple_repeat 1 52 0 4 980 6501 64 15 1 chr17 51777449 51778268 -43494383 - L1_Mus3 LINE L1 -166 6472 5643 4 980 827 90 13 59 chr17 51778267 51778370 -43494281 + L1_Mus3 LINE L1 6488 6591 -47 4 980 3595 23 0 0 chr17 51778370 51778766 -43493885 - MTA_Mm LTR MaLR 0 396 1 4 980 9970 9 0 0 chr17 51778766 51779864 -43492787 - MTA_Mm-int LTR MaLR 0 1098 1 4 980 3622 18 0 0 chr17 51779864 51780260 -43492391 - MTA_Mm LTR MaLR 0 396 1 4 980 827 90 13 59 chr17 51780260 51780351 -43492300 + L1_Mus3 LINE L1 6592 6638 0 4 980 253 220 17 0 chr17 51780369 51780428 -43492223 + (TTTG)n Simple_repeat Simple_repeat 1 60 0 4 980 261 0 0 0 chr17 51780449 51780478 -43492173 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4 980 238 169 102 0 chr17 51781279 51781338 -43491313 - ORR1D1 LTR MaLR 0 374 310 4 980 355 250 0 12 chr17 51783370 51783455 -43489196 + PB1D10 SINE Alu 34 117 0 4 980 522 250 81 6 chr17 51783780 51783953 -43488698 + MER5A DNA MER1_type 2 187 -2 4 980 180 0 0 0 chr17 51784054 51784074 -43488577 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 980 767 242 92 12 chr17 51785006 51785257 -43487394 - ORR1E LTR MaLR 0 359 89 4 980 784 290 75 16 chr17 51785375 51785746 -43486905 - MLT1C LTR MaLR -65 402 10 4 980 300 91 0 0 chr17 51786088 51786132 -43486519 + (TCTG)n Simple_repeat Simple_repeat 1 44 0 4 980 813 162 0 0 chr17 51786132 51786286 -43486365 + (TCCA)n Simple_repeat Simple_repeat 3 156 0 4 980 181 0 0 65 chr17 51786310 51786341 -43486310 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 4 980 387 0 0 0 chr17 51786561 51786604 -43486047 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 980 254 29 0 28 chr17 51786605 51786641 -43486010 + (GA)n Simple_repeat Simple_repeat 2 36 0 4 980 445 304 68 40 chr17 51787098 51787342 -43485309 + L1M5 LINE L1 5301 5553 -687 4 980 351 333 111 0 chr17 51788030 51788165 -43484486 + RSINE1 SINE B4 2 151 -14 4 980 198 0 0 0 chr17 51788176 51788198 -43484453 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 980 534 230 43 22 chr17 51789368 51789506 -43483145 - B1_Mur1 SINE Alu -7 142 2 4 980 1337 238 113 29 chr17 51789506 51790207 -43482444 + L1MB8 LINE L1 5108 5867 -311 4 980 533 271 44 29 chr17 51790231 51790368 -43482283 + B1_Mur1 SINE Alu 9 147 -2 4 980 197 98 24 0 chr17 51790368 51790409 -43482242 + (CAA)n Simple_repeat Simple_repeat 1 42 0 4 980 277 380 61 14 chr17 51790409 51790705 -43481946 + L1MB8 LINE L1 5859 6168 -11 4 980 423 0 0 0 chr17 51790705 51790752 -43481899 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 4 980 222 229 0 0 chr17 51791978 51792026 -43480625 - B1F SINE Alu -36 113 66 4 980 304 278 0 15 chr17 51792476 51792568 -43480083 + ID4 SINE ID 2 89 -63 4 980 403 226 17 78 chr17 51792676 51792791 -43479860 - B3A SINE B2 -87 108 1 4 980 355 167 51 85 chr17 51792831 51792949 -43479702 + MER5A1 DNA MER1_type 52 165 -1 4 980 1045 203 122 12 chr17 51796130 51796384 -43476267 - ORR1D1 LTR MaLR -87 287 6 4 980 1352 12 0 12 chr17 51798450 51798613 -43474038 + (GGGAGA)n Simple_repeat Simple_repeat 3 163 0 4 980 430 235 81 24 chr17 51798633 51798837 -43473814 - MTD LTR MaLR -14 405 108 4 980 827 239 39 21 chr17 51798848 51799205 -43473446 + MTD LTR MaLR 4 419 0 4 980 255 291 57 49 chr17 51799205 51799318 -43473333 - MTD LTR MaLR -307 114 1 4 980 456 218 0 0 chr17 51799463 51799596 -43473055 + (TG)n Simple_repeat Simple_repeat 2 134 0 4 980 244 265 15 0 chr17 51801106 51801174 -43471477 - B3A SINE B2 -129 69 1 4 980 267 200 0 0 chr17 51801225 51801270 -43471381 - Lx6 LINE L1 -824 6636 6592 4 980 604 209 215 21 chr17 51801272 51801331 -43471320 + ORR1D1 LTR MaLR 98 177 -197 4 980 1080 84 0 0 chr17 51801331 51801497 -43471154 + (TC)n Simple_repeat Simple_repeat 1 166 0 4 980 604 209 215 21 chr17 51801497 51801628 -43471023 + ORR1D1 LTR MaLR 178 324 -50 4 980 253 305 21 21 chr17 51801942 51802039 -43470612 + MLT1A1 LTR MaLR 312 408 0 4 980 479 330 19 37 chr17 51802057 51802271 -43470380 - B3A SINE B2 -6 210 1 5 980 384 155 0 101 chr17 51802686 51802765 -43469886 + U6 snRNA snRNA 4 74 -33 5 980 27 0 0 0 chr17 51802768 51802795 -43469856 + AT_rich Low_complexity Low_complexity 1 27 0 5 980 778 183 7 27 chr17 51803525 51803660 -43468991 + B1_Mur2 SINE Alu 7 142 -7 5 980 279 0 0 0 chr17 51803660 51803691 -43468960 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 980 432 0 0 0 chr17 51803691 51803738 -43468913 + (GA)n Simple_repeat Simple_repeat 2 49 0 5 980 251 113 0 19 chr17 51804099 51804153 -43468498 + (CAAAAA)n Simple_repeat Simple_repeat 2 54 0 5 980 22 0 0 0 chr17 51804271 51804293 -43468358 + AT_rich Low_complexity Low_complexity 1 22 0 5 980 210 71 0 0 chr17 51804424 51804452 -43468199 + (A)n Simple_repeat Simple_repeat 1 28 0 5 980 709 197 29 0 chr17 51805146 51805283 -43467368 + B1_Mur1 SINE Alu 2 142 -7 5 980 325 250 0 0 chr17 51805635 51805703 -43466948 + ID4 SINE ID 9 76 -7 5 980 495 0 0 0 chr17 51805703 51805758 -43466893 + (TAAAA)n Simple_repeat Simple_repeat 2 56 0 5 980 1024 206 84 120 chr17 51806323 51806714 -43465937 + MTE2a LTR MaLR 1 377 -2 5 980 369 0 0 0 chr17 51806846 51806887 -43465764 + (TTGG)n Simple_repeat Simple_repeat 2 42 0 5 980 1960 204 53 6 chr17 51807685 51808178 -43464473 - RCHARR1 DNA MER1_type -1 973 458 5 980 198 103 0 0 chr17 51808181 51808210 -43464441 + (ATG)n Simple_repeat Simple_repeat 2 30 0 5 980 237 65 0 0 chr17 51808229 51808260 -43464391 + (TATG)n Simple_repeat Simple_repeat 2 32 0 5 980 219 36 0 0 chr17 51809301 51809329 -43463322 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 5 980 364 315 53 77 chr17 51810207 51810506 -43462145 + B4A SINE B4 1 292 0 5 980 681 120 0 0 chr17 51810731 51810864 -43461787 + (TG)n Simple_repeat Simple_repeat 2 134 0 5 980 570 29 0 0 chr17 51811334 51811402 -43461249 + (CA)n Simple_repeat Simple_repeat 2 69 0 5 980 254 238 183 29 chr17 51811410 51811514 -43461137 + PB1D7 SINE Alu 1 120 0 5 980 1156 55 7 14 chr17 51812926 51813074 -43459577 + B1_Mm SINE Alu 1 147 0 5 980 227 200 32 32 chr17 51813253 51813315 -43459336 - L1MC5 LINE L1 -520 7441 7380 5 980 237 239 138 69 chr17 51813695 51813884 -43458767 - L1MC5 LINE L1 -837 7124 6923 5 980 320 275 11 0 chr17 51814016 51814107 -43458544 - PB1D10 SINE Alu -4 113 22 5 980 808 120 13 0 chr17 51814220 51814370 -43458281 + (CACCC)n Simple_repeat Simple_repeat 2 153 0 5 980 1258 96 5 33 chr17 51814481 51814665 -43457986 + B2_Mm1a SINE B2 1 179 -14 5 980 400 64 324 27 chr17 51814693 51814804 -43457847 + B2_Mm2 SINE B2 47 190 -5 5 980 213 39 0 0 chr17 51814804 51814830 -43457821 + (GGA)n Simple_repeat Simple_repeat 1 26 0 5 980 279 0 0 0 chr17 51814983 51815014 -43457637 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 5 980 322 215 129 0 chr17 51815054 51815147 -43457504 - PB1D9 SINE Alu -7 113 9 5 980 27 0 0 0 chr17 51815295 51815322 -43457329 + AT_rich Low_complexity Low_complexity 1 27 0 5 980 387 101 12 25 chr17 51815522 51815603 -43457048 + (TCTA)n Simple_repeat Simple_repeat 3 82 0 5 980 23 0 0 0 chr17 51815843 51815866 -43456785 + AT_rich Low_complexity Low_complexity 1 23 0 5 980 657 236 101 58 chr17 51815868 51816075 -43456576 - B3 SINE B2 0 216 1 5 980 835 244 107 0 chr17 51816309 51816534 -43456117 + RCHARR1 DNA MER1_type 117 365 -609 5 980 851 250 36 14 chr17 51816543 51816766 -43455885 + B4A SINE B4 5 232 -60 5 980 3135 129 101 23 chr17 51816849 51817454 -43455197 + RLTR17 LTR ERVK 1 652 -40 5 980 257 191 56 42 chr17 51817565 51817636 -43455015 + RLTR17 LTR ERVK 621 692 0 5 980 233 217 33 78 chr17 51817652 51817742 -43454909 + RCHARR1 DNA MER1_type 361 446 -528 5 980 305 301 73 33 chr17 51819214 51819365 -43453286 - RSINE1 SINE B4 -4 161 5 5 980 288 0 0 0 chr17 51819497 51819529 -43453122 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 5 980 7377 54 5 3 chr17 51820012 51820904 -43451747 - RLTR13B1 LTR ERVK 0 893 1 5 980 495 33 0 0 chr17 51822436 51822497 -43450154 + (TC)n Simple_repeat Simple_repeat 2 62 0 5 980 302 327 78 0 chr17 51822807 51823012 -43449639 + L2 LINE L2 2115 2335 -1084 5 980 2177 157 8 37 chr17 51824197 51824575 -43448076 - ORR1B2 LTR MaLR 0 367 1 5 980 42 20 0 0 chr17 51824753 51824802 -43447849 + AT_rich Low_complexity Low_complexity 1 49 0 5 980 500 0 17 0 chr17 51824888 51824948 -43447703 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 5 980 2896 270 141 18 chr17 51824955 51825955 -43446696 - Lx9 LINE L1 -175 7469 6347 5 980 809 268 50 39 chr17 51825979 51826239 -43446412 - MTD LTR MaLR -156 263 1 5 980 1666 263 148 46 chr17 51826303 51826363 -43446288 - MTD-int LTR MaLR -244 1014 955 5 980 207 0 0 0 chr17 51826363 51826386 -43446265 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 980 1666 239 186 77 chr17 51826386 51827239 -43445412 - MTD-int LTR MaLR -304 954 1 5 980 492 237 50 8 chr17 51827237 51827356 -43445295 - MTD LTR MaLR -2 417 294 5 980 400 278 372 4 chr17 51827502 51827769 -43444882 + MLT1A0 LTR MaLR 1 365 0 5 980 207 0 0 0 chr17 51829308 51829331 -43443320 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 980 445 336 103 27 chr17 51830610 51830823 -43441828 + B4A SINE B4 4 228 -64 5 980 216 0 0 0 chr17 51830823 51830847 -43441804 + (TAA)n Simple_repeat Simple_repeat 2 25 0 5 980 445 336 103 27 chr17 51830847 51830896 -43441755 + B4A SINE B4 229 286 -6 5 980 4076 0 2 0 chr17 51831261 51831785 -43440866 - L1Md_A LINE L1 -616 5966 5440 5 980 3522 3 0 0 chr17 51831785 51832170 -43440481 + L1Md_A LINE L1 6198 6582 0 5 980 414 235 0 0 chr17 51832373 51832475 -43440176 + CT-rich Low_complexity Low_complexity 2 103 0 5 980 229 360 75 60 chr17 51833026 51833227 -43439424 + MLT1N2 LTR MaLR 56 259 -303 5 980 368 340 25 68 chr17 51833329 51833490 -43439161 - ID_B1 SINE B4 -70 154 1 5 980 686 218 181 10 chr17 51833800 51833999 -43438652 + B4A SINE B4 2 234 -58 5 980 3155 132 18 73 chr17 51834286 51834844 -43437807 - RLTR11A2 LTR ERVK 0 527 1 5 980 216 274 0 0 chr17 51834927 51834978 -43437673 + PB1D10 SINE Alu 23 73 -44 5 980 351 0 0 0 chr17 51835516 51835555 -43437096 + (TTA)n Simple_repeat Simple_repeat 3 41 0 5 980 539 250 36 7 chr17 51835822 51835959 -43436692 + B1F SINE Alu 1 141 -8 5 980 248 250 78 0 chr17 51835980 51836044 -43436607 + ID4_ SINE ID 1 69 -14 5 980 296 24 0 24 chr17 51836327 51836369 -43436282 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 5 980 387 60 0 0 chr17 51837014 51837064 -43435587 + (TTA)n Simple_repeat Simple_repeat 1 50 0 5 980 233 200 29 0 chr17 51837565 51837635 -43435016 + GA-rich Low_complexity Low_complexity 2 73 0 5 980 240 208 52 0 chr17 51837788 51837865 -43434786 + Lx9 LINE L1 7563 7643 -1 5 980 21 0 0 0 chr17 51839173 51839194 -43433457 + AT_rich Low_complexity Low_complexity 1 21 0 5 980 487 252 40 0 chr17 51839813 51839912 -43432739 + RSINE1 SINE B4 22 124 -41 5 980 252 0 0 0 chr17 51839912 51839940 -43432711 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 980 676 274 41 31 chr17 51841068 51841264 -43431387 + B3A SINE B2 1 198 0 5 980 817 197 117 41 chr17 51842953 51843149 -43429502 - B3 SINE B2 -4 212 2 5 980 239 53 0 81 chr17 51843178 51843240 -43429411 + (TTTG)n Simple_repeat Simple_repeat 2 58 0 5 980 2462 26 57 229 chr17 51843305 51843746 -43428905 + RLTR10B2 LTR ERVK 1 365 0 5 980 305 122 41 48 chr17 51844499 51844645 -43428006 + (TATAA)n Simple_repeat Simple_repeat 1 145 0 5 980 361 287 50 0 chr17 51844677 51844778 -43427873 + PB1D10 SINE Alu 4 109 -8 5 980 684 268 31 19 chr17 51845013 51845173 -43427478 + B3A SINE B2 1 162 -36 5 980 235 348 92 41 chr17 51846633 51846828 -43425823 + ORR1E LTR MaLR 67 271 -88 5 980 305 243 56 46 chr17 51847222 51847330 -43425321 - MTD LTR MaLR -310 109 1 5 980 22 0 0 0 chr17 51847331 51847353 -43425298 + AT_rich Low_complexity Low_complexity 1 22 0 5 980 402 267 121 0 chr17 51847400 51847516 -43425135 - RSINE1 SINE B4 -15 150 21 5 980 333 293 129 8 chr17 51848906 51849030 -43423621 - B1F SINE Alu -9 140 2 5 980 959 245 24 19 chr17 51849167 51849379 -43423272 - B3 SINE B2 0 216 4 5 980 4719 54 2 5 chr17 51849459 51850018 -43422633 + L1Md_F2 LINE L1 6026 6582 0 5 980 789 283 17 17 chr17 51850032 51850273 -43422378 - L1MA4 LINE L1 -373 5927 5687 5 980 396 0 0 0 chr17 51850558 51850602 -43422049 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 980 288 0 0 0 chr17 51851527 51851559 -43421092 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 980 401 312 11 0 chr17 51851671 51851764 -43420887 - B3A SINE B2 -5 193 100 5 980 1738 299 131 26 chr17 51851773 51852345 -43420306 + Lx8 LINE L1 5560 6174 -1299 5 980 186 103 0 0 chr17 51852345 51852374 -43420277 + (CATA)n Simple_repeat Simple_repeat 2 30 0 5 980 1738 296 136 27 chr17 51852374 51852695 -43419956 + Lx8 LINE L1 6175 6542 -931 5 980 1075 318 105 21 chr17 51852753 51853364 -43419287 + Lx8 LINE L1 6806 7467 -6 5 980 264 122 0 0 chr17 51853377 51853418 -43419233 + (GGGA)n Simple_repeat Simple_repeat 3 43 0 5 980 1412 39 6 0 chr17 51853421 51853600 -43419051 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 5 980 1284 92 0 0 chr17 51853600 51854080 -43418571 + (GAA)n Simple_repeat Simple_repeat 1 480 0 5 980 180 97 0 0 chr17 51854103 51854134 -43418517 + (CAGAGA)n Simple_repeat Simple_repeat 4 34 0 5 980 250 226 73 31 chr17 51854161 51854257 -43418394 - RMER20B LTR ERVK 0 516 417 5 980 471 217 37 111 chr17 51854424 51854593 -43418058 - RMER20B LTR ERVK -355 161 1 5 980 603 248 35 0 chr17 51854593 51854703 -43417948 + B1_Mur1 SINE Alu 12 125 -24 5 980 1738 26 5 0 chr17 51854711 51854900 -43417751 - B2_Mm1t SINE B2 -3 190 1 5 980 34655 68 1 17 chr17 51855141 51860302 -43412349 + L1Md_F2 LINE L1 511 5585 -298 5 980 8539 54 1 2 chr17 51860303 51861293 -43411358 + L1Md_F2 LINE L1 5587 6575 -7 5 980 414 287 46 127 chr17 51861321 51861518 -43411133 + B3A SINE B2 36 216 0 6 980 557 284 209 31 chr17 51861631 51862277 -43410374 - L1MD LINE L1 -2627 3519 2759 6 980 2132 155 0 78 chr17 51863195 51863579 -43409072 - ORR1B1 LTR MaLR 0 394 41 6 980 1529 244 64 17 chr17 51864187 51864546 -43408105 - MTE2b LTR MaLR 0 379 4 6 980 374 241 12 25 chr17 51864716 51864797 -43407854 - ID4_ SINE ID -3 80 1 6 980 548 136 284 7 chr17 51864996 51865137 -43407514 - URR1A DNA MER1_type 0 226 47 6 980 1591 128 0 4 chr17 51865145 51865380 -43407271 - MTC LTR MaLR -187 234 1 6 980 458 204 10 30 chr17 51865452 51865553 -43407098 + MTE2b LTR MaLR 1 99 -280 6 980 721 225 11 40 chr17 51865555 51865731 -43406920 + MTE2b LTR MaLR 209 379 0 6 980 858 184 7 26 chr17 51865912 51866063 -43406588 - B1_Mur2 SINE Alu 0 149 2 6 980 33 56 0 0 chr17 51866318 51866372 -43406279 + AT_rich Low_complexity Low_complexity 1 54 0 6 980 302 206 149 21 chr17 51866516 51866610 -43406041 - L1MC1 LINE L1 -3 6330 6225 6 980 988 286 79 19 chr17 51866667 51866984 -43405667 - MTEa LTR MaLR -26 353 18 6 980 309 310 161 0 chr17 51866989 51867144 -43405507 - L1MC1 LINE L1 -171 6162 5983 6 980 404 248 181 0 chr17 51867516 51867649 -43405002 - L1MDa LINE L1 -6283 350 194 6 980 742 222 0 7 chr17 51867649 51867785 -43404866 + B3 SINE B2 2 136 -80 6 980 1071 93 36 0 chr17 51867859 51867999 -43404652 - B1_Mus2 SINE Alu 0 147 3 6 980 576 65 0 0 chr17 51868112 51868189 -43404462 + (CTA)n Simple_repeat Simple_repeat 3 79 0 6 980 296 225 8 0 chr17 51868189 51868318 -43404333 + (CA)n Simple_repeat Simple_repeat 2 131 0 6 980 29 0 0 0 chr17 51868749 51868778 -43403873 + AT_rich Low_complexity Low_complexity 1 29 0 6 980 241 241 56 0 chr17 51868783 51868837 -43403814 - B2_Mm2 SINE B2 -137 58 2 6 980 23 54 0 0 chr17 51868942 51868979 -43403672 + AT_rich Low_complexity Low_complexity 1 37 0 6 980 366 349 0 16 chr17 51869786 51869914 -43402737 - MER58B DNA MER1_type -1 340 215 6 980 384 155 0 0 chr17 51870214 51870285 -43402366 + CT-rich Low_complexity Low_complexity 2 72 0 6 980 1440 118 0 5 chr17 51870289 51870484 -43402167 - B2_Mm2 SINE B2 -1 194 1 6 980 186 43 0 0 chr17 51870538 51870561 -43402090 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 6 980 649 211 0 0 chr17 51870721 51870835 -43401816 + B1_Mus2 SINE Alu 34 147 0 6 980 296 281 88 43 chr17 51870998 51871346 -43401305 + L1M4 LINE L1 4328 4694 -1452 6 980 611 78 0 11 chr17 51871525 51871616 -43401035 + (GA)n Simple_repeat Simple_repeat 2 91 0 6 980 289 237 13 13 chr17 51871621 51871698 -43400953 + L1MC LINE L1 4958 5034 -1112 6 980 334 252 0 51 chr17 51871748 51871886 -43400765 - Lx4B LINE L1 -4 7054 6924 6 980 586 162 10 0 chr17 51871888 51871987 -43400664 + Lx4B LINE L1 6818 6917 -141 6 980 348 323 84 10 chr17 51871983 51872186 -43400465 + L1MD LINE L1 5024 5241 -905 6 980 910 144 140 67 chr17 51872275 51872439 -43400212 + B3 SINE B2 1 176 -19 6 980 212 254 0 0 chr17 51872685 51872748 -43399903 + T-rich Low_complexity Low_complexity 1 63 0 6 980 392 271 178 0 chr17 51872934 51873052 -43399599 + RSINE1 SINE B4 3 141 -24 6 980 507 33 0 0 chr17 51873056 51873117 -43399534 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 980 225 0 0 0 chr17 51873236 51873261 -43399390 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 6 980 214 186 0 0 chr17 51874304 51874347 -43398304 + T-rich Low_complexity Low_complexity 1 43 0 6 980 200 395 16 16 chr17 51874604 51874725 -43397926 + MIRc SINE MIR 85 205 -63 6 980 495 0 0 0 chr17 51874955 51875010 -43397641 + (CA)n Simple_repeat Simple_repeat 1 55 0 6 980 22 0 0 0 chr17 51876047 51876069 -43396582 + AT_rich Low_complexity Low_complexity 1 22 0 6 980 218 194 0 0 chr17 51878763 51878799 -43393852 + polypyrimidine Low_complexity Low_complexity 2 37 0 6 980 381 43 0 0 chr17 51879695 51879742 -43392909 + (CTG)n Simple_repeat Simple_repeat 3 49 0 6 980 273 29 0 0 chr17 51880342 51880376 -43392275 + (CAGA)n Simple_repeat Simple_repeat 4 37 0 6 980 198 0 0 0 chr17 51881494 51881516 -43391135 + (CCCTG)n Simple_repeat Simple_repeat 5 26 0 6 980 356 282 113 0 chr17 51882415 51882539 -43390112 + B4A SINE B4 2 139 -153 6 980 681 13 0 0 chr17 51883670 51883748 -43388903 + (GAAA)n Simple_repeat Simple_repeat 3 80 0 6 980 224 241 34 17 chr17 51883836 51883895 -43388756 - BC1_Mm scRNA scRNA -68 84 25 6 980 488 212 0 8 chr17 51883964 51884097 -43388554 + (TA)n Simple_repeat Simple_repeat 2 133 0 6 980 516 32 0 0 chr17 51884119 51884181 -43388470 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 980 243 88 0 0 chr17 51884819 51884853 -43387798 + (T)n Simple_repeat Simple_repeat 1 34 0 6 980 300 111 0 0 chr17 51886293 51886338 -43386313 + (A)n Simple_repeat Simple_repeat 1 45 0 6 980 189 0 0 0 chr17 51886340 51886361 -43386290 + (CAA)n Simple_repeat Simple_repeat 1 21 0 6 980 22 0 0 0 chr17 51889265 51889287 -43383364 + AT_rich Low_complexity Low_complexity 1 22 0 6 980 1087 151 172 0 chr17 51889550 51889742 -43382909 + URR1B DNA MER1_type 1 225 0 6 980 264 59 0 0 chr17 51889947 51889981 -43382670 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 980 231 114 0 0 chr17 51890500 51890544 -43382107 + (A)n Simple_repeat Simple_repeat 1 44 0 6 980 210 359 0 0 chr17 51891654 51891741 -43380910 + MIRm SINE MIR 60 152 -124 6 980 304 318 42 84 chr17 51892029 51892266 -43380385 + L1ME4a LINE L1 5544 5770 -354 6 980 261 211 25 101 chr17 51892290 51892448 -43380203 + L1ME4a LINE L1 5931 6076 -48 6 980 31 44 0 0 chr17 51893250 51893295 -43379356 + AT_rich Low_complexity Low_complexity 1 45 0 6 980 668 295 53 122 chr17 51894473 51894688 -43377963 - Charlie4a DNA MER1_type -12 496 326 6 980 405 0 0 0 chr17 51894688 51894733 -43377918 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 980 668 295 53 122 chr17 51894733 51894969 -43377682 - Charlie4a DNA MER1_type -183 325 76 6 980 22 0 0 0 chr17 51896602 51896624 -43376027 + AT_rich Low_complexity Low_complexity 1 22 0 6 980 238 250 58 14 chr17 51898224 51898293 -43374358 + MER117 DNA MER1_type 58 129 -68 6 980 288 77 0 0 chr17 51899137 51899176 -43373475 + (A)n Simple_repeat Simple_repeat 1 39 0 6 980 231 88 0 0 chr17 51901128 51901162 -43371489 + (A)n Simple_repeat Simple_repeat 1 34 0 6 980 181 57 57 0 chr17 51901441 51901476 -43371175 + (TAAAAA)n Simple_repeat Simple_repeat 2 38 0 6 981 204 40 0 0 chr17 51905591 51905616 -43367035 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 6 981 22 0 0 0 chr17 51905640 51905662 -43366989 + AT_rich Low_complexity Low_complexity 1 22 0 6 981 22 70 0 0 chr17 51910568 51910611 -43362040 + AT_rich Low_complexity Low_complexity 1 43 0 6 981 225 309 12 0 chr17 51911646 51911730 -43360921 + MIRc SINE MIR 178 262 -6 6 981 24 53 0 0 chr17 51914128 51914166 -43358485 + AT_rich Low_complexity Low_complexity 1 38 0 6 981 219 36 0 0 chr17 51914460 51914488 -43358163 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 6 981 439 297 27 0 chr17 51916388 51916499 -43356152 + PB1D10 SINE Alu 1 114 -3 6 981 204 240 0 0 chr17 51920856 51920906 -43351745 + A-rich Low_complexity Low_complexity 1 50 0 6 981 257 167 19 0 chr17 51921298 51921352 -43351299 + GA-rich Low_complexity Low_complexity 2 56 0 6 981 935 131 178 0 chr17 51922632 51922823 -43349828 + URR1B DNA MER1_type 1 225 0 6 981 480 163 0 0 chr17 51924761 51924847 -43347804 + T-rich Low_complexity Low_complexity 1 86 0 6 981 2975 56 0 3 chr17 51925765 51926143 -43346508 + L1Md_F3 LINE L1 6208 6584 0 6 981 307 294 24 0 chr17 51926165 51926250 -43346401 + B4A SINE B4 67 153 -139 6 981 357 232 91 0 chr17 51926194 51926293 -43346358 + PB1D9 SINE Alu 13 120 0 6 981 183 42 0 0 chr17 51926358 51926382 -43346269 + (A)n Simple_repeat Simple_repeat 1 24 0 6 981 377 313 75 0 chr17 51927789 51927923 -43344728 + RSINE1 SINE B4 3 146 -19 6 981 555 16 0 0 chr17 51927933 51927997 -43344654 + (CA)n Simple_repeat Simple_repeat 2 65 0 6 981 486 285 185 0 chr17 51928089 51928332 -43344319 - B4A SINE B4 -4 288 1 6 981 189 0 0 0 chr17 51929528 51929549 -43343102 + (A)n Simple_repeat Simple_repeat 1 21 0 6 981 276 149 0 0 chr17 51929822 51929869 -43342782 + (A)n Simple_repeat Simple_repeat 1 47 0 6 981 189 0 0 0 chr17 51930057 51930078 -43342573 + (GGA)n Simple_repeat Simple_repeat 3 23 0 6 981 405 0 0 0 chr17 51931342 51931387 -43341264 + (TTCC)n Simple_repeat Simple_repeat 3 47 0 6 981 375 23 0 0 chr17 51933115 51933159 -43339492 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 981 380 252 114 19 chr17 51934451 51934556 -43338095 + RSINE1 SINE B4 17 131 -34 6 981 237 108 0 0 chr17 51934845 51934882 -43337769 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 981 209 246 15 0 chr17 51934933 51934998 -43337653 + A-rich Low_complexity Low_complexity 5 70 0 6 981 564 36 12 24 chr17 51935062 51935147 -43337504 + (TTCC)n Simple_repeat Simple_repeat 4 87 0 6 981 1025 95 6 17 chr17 51935186 51935358 -43337293 + (TTCC)n Simple_repeat Simple_repeat 2 171 0 6 981 877 107 23 0 chr17 51935359 51935490 -43337161 - B1_Mus1 SINE Alu -14 134 1 6 981 186 103 0 0 chr17 51935807 51935836 -43336815 + (A)n Simple_repeat Simple_repeat 1 29 0 6 981 394 162 37 12 chr17 51937634 51937715 -43334936 + B1_Mur4 SINE Alu 64 146 -4 6 981 198 0 0 0 chr17 51937720 51937742 -43334909 + (TGGA)n Simple_repeat Simple_repeat 1 22 0 6 981 21 0 0 0 chr17 51938779 51938800 -43333851 + AT_rich Low_complexity Low_complexity 1 21 0 6 981 21 0 0 0 chr17 51944308 51944329 -43328322 + AT_rich Low_complexity Low_complexity 1 21 0 6 981 24 32 0 0 chr17 51946334 51946365 -43326286 + AT_rich Low_complexity Low_complexity 1 31 0 6 981 21 0 0 0 chr17 51947252 51947273 -43325378 + AT_rich Low_complexity Low_complexity 1 21 0 6 981 180 0 0 0 chr17 51951195 51951215 -43321436 + (TTA)n Simple_repeat Simple_repeat 2 21 0 7 981 207 0 0 0 chr17 51952375 51952398 -43320253 + (CTCG)n Simple_repeat Simple_repeat 1 23 0 7 981 240 143 0 0 chr17 51952510 51952552 -43320099 + (CCG)n Simple_repeat Simple_repeat 3 44 0 7 981 295 254 25 25 chr17 51952649 51952770 -43319881 + G-rich Low_complexity Low_complexity 1 121 0 7 981 21 36 0 0 chr17 51952786 51952814 -43319837 + GC_rich Low_complexity Low_complexity 1 28 0 7 981 23 0 0 0 chr17 51952869 51952892 -43319759 + GC_rich Low_complexity Low_complexity 1 23 0 7 981 288 0 0 0 chr17 51955033 51955065 -43317586 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 981 440 253 61 31 chr17 51956632 51956795 -43315856 - MER3 DNA MER1_type -40 169 2 7 981 302 296 0 0 chr17 51957932 51958094 -43314557 + (TTAGGC)n Simple_repeat Simple_repeat 6 167 0 7 981 2709 62 112 3 chr17 51958094 51958451 -43314200 - MTA_Mm LTR MaLR 0 396 1 7 981 222 62 0 0 chr17 51959525 51959557 -43313094 + (TTA)n Simple_repeat Simple_repeat 1 32 0 7 981 339 276 51 22 chr17 51959811 51959948 -43312703 + L1MB4 LINE L1 6040 6180 0 7 981 243 170 0 0 chr17 51961506 51961553 -43311098 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 981 234 0 0 0 chr17 51962713 51962739 -43309912 + (A)n Simple_repeat Simple_repeat 1 26 0 7 981 218 57 0 54 chr17 51967125 51967162 -43305489 + (GGAA)n Simple_repeat Simple_repeat 3 37 0 7 981 666 68 0 0 chr17 51970212 51970300 -43302351 + (TCTA)n Simple_repeat Simple_repeat 2 89 0 7 981 28 79 0 0 chr17 51971814 51971877 -43300774 + GC_rich Low_complexity Low_complexity 1 63 0 7 981 276 221 10 40 chr17 51972000 51972099 -43300552 + G-rich Low_complexity Low_complexity 2 97 0 7 981 22 56 0 0 chr17 51972251 51972287 -43300364 + GC_rich Low_complexity Low_complexity 1 36 0 7 981 274 95 48 0 chr17 51973724 51973787 -43298864 + (TTTTTG)n Simple_repeat Simple_repeat 2 67 0 7 981 228 163 0 0 chr17 51973972 51974015 -43298636 + CT-rich Low_complexity Low_complexity 2 44 0 7 981 887 217 18 63 chr17 51974615 51974836 -43297815 - B3 SINE B2 -5 211 1 7 981 428 289 7 22 chr17 51975148 51975286 -43297365 + RSINE1 SINE B4 22 157 -8 7 981 186 328 16 0 chr17 51976317 51976381 -43296270 - L2b LINE L2 -5 3370 3306 7 981 897 251 77 17 chr17 51976810 51977145 -43295506 - MTEb LTR MaLR 0 379 3 7 981 189 0 0 0 chr17 51977342 51977363 -43295288 + (TATAA)n Simple_repeat Simple_repeat 4 24 0 7 981 287 278 21 32 chr17 51977420 51977513 -43295138 + RSINE1 SINE B4 2 93 -72 7 981 210 37 0 0 chr17 51977842 51977869 -43294782 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 981 737 263 56 0 chr17 51978168 51978366 -43294285 - B3 SINE B2 -6 210 2 7 981 1205 48 7 0 chr17 51978486 51978632 -43294019 - B1_Mus2 SINE Alu 0 147 1 7 981 314 272 78 35 chr17 51978736 51978861 -43293790 + MIR SINE MIR 14 133 -75 7 981 204 40 0 0 chr17 51979263 51979288 -43293363 + (TA)n Simple_repeat Simple_repeat 2 26 0 7 981 978 152 54 5 chr17 51979781 51979966 -43292685 - B2_Mm2 SINE B2 0 195 2 7 981 1596 140 224 3 chr17 51979991 51980299 -43292352 - ORR1C1 LTR MaLR 0 378 3 7 981 264 284 40 72 chr17 51980579 51980597 -43292054 - ID_B1 SINE B4 -23 201 82 7 981 364 267 19 47 chr17 51980597 51980703 -43291948 - B1_Mur3 SINE Alu -46 103 1 7 981 537 280 0 0 chr17 51982706 51982824 -43289827 - RSINE1 SINE B4 -37 128 11 7 981 21 0 0 0 chr17 51983277 51983298 -43289353 + AT_rich Low_complexity Low_complexity 1 21 0 7 981 21 36 0 0 chr17 51983361 51983389 -43289262 + AT_rich Low_complexity Low_complexity 1 28 0 7 981 840 232 40 24 chr17 51983664 51983876 -43288775 + B3A SINE B2 3 216 0 7 981 730 188 65 0 chr17 51983902 51984040 -43288611 - B1_Mur2 SINE Alu -1 148 2 7 981 1791 202 88 43 chr17 51984270 51984669 -43287982 + MTC LTR MaLR 5 421 0 7 981 258 269 67 100 chr17 51984725 51984845 -43287806 - B1F SINE Alu -33 116 1 7 981 300 272 159 98 chr17 51985844 51985908 -43286743 + B4A SINE B4 2 75 -217 7 981 213 302 18 143 chr17 51985908 51986020 -43286631 + B1F2 SINE Alu 1 98 -51 7 981 226 146 0 24 chr17 51986056 51986098 -43286553 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 981 289 203 421 43 chr17 51986511 51986650 -43286001 - Lx8 LINE L1 -361 7112 6922 7 981 632 262 14 0 chr17 51986669 51986810 -43285841 - B1_Mus2 SINE Alu -3 144 2 7 981 561 232 32 8 chr17 51986998 51987124 -43285527 - RSINE1 SINE B4 -33 132 4 7 981 27 0 0 0 chr17 51987147 51987174 -43285477 + AT_rich Low_complexity Low_complexity 1 27 0 7 981 21 36 0 0 chr17 51987332 51987360 -43285291 + AT_rich Low_complexity Low_complexity 1 28 0 7 981 340 212 239 0 chr17 51987713 51987826 -43284825 - B1_Mus1 SINE Alu 0 148 9 7 981 292 237 137 48 chr17 51987893 51988017 -43284634 - B1F2 SINE Alu -1 148 14 7 981 227 325 0 12 chr17 51988189 51988270 -43284381 + L1M5 LINE L1 4712 4791 -1355 7 981 1501 157 39 84 chr17 51989071 51989427 -43283224 + ORR1B1 LTR MaLR 42 381 -13 7 981 1063 162 62 29 chr17 51989904 51990114 -43282537 + MTC LTR MaLR 205 421 0 7 981 284 175 16 0 chr17 51990169 51990232 -43282419 + GA-rich Low_complexity Low_complexity 2 65 0 7 981 3584 20 0 0 chr17 51990507 51990903 -43281748 + MTA_Mm LTR MaLR 1 396 0 7 981 246 299 72 80 chr17 51991532 51991670 -43280981 + MT2B LTR ERVL 121 257 -344 7 981 682 133 0 0 chr17 51991587 51991692 -43280959 + B1_Mur4 SINE Alu 23 127 -23 7 981 320 64 0 21 chr17 51991715 51991763 -43280888 + (TAA)n Simple_repeat Simple_repeat 2 48 0 7 981 325 191 155 0 chr17 51992343 51992427 -43280224 - PB1D10 SINE Alu 0 117 21 7 981 491 260 109 38 chr17 51992461 51992645 -43280006 - Lx6 LINE L1 -3 7457 7261 7 981 322 217 145 0 chr17 51993028 51993111 -43279540 + PB1D9 SINE Alu 20 114 -6 7 981 531 308 0 7 chr17 51993126 51993273 -43279378 + RSINE1 SINE B4 3 148 -17 7 981 357 301 35 9 chr17 51994565 51994679 -43277972 + PB1D10 SINE Alu 1 117 0 7 981 246 307 11 0 chr17 51994717 51994805 -43277846 + MER5A1 DNA MER1_type 61 149 -17 7 981 492 18 0 0 chr17 51994964 51995021 -43277630 + (GA)n Simple_repeat Simple_repeat 2 58 0 7 981 742 207 6 23 chr17 51995449 51995623 -43277028 - MER5A DNA MER1_type -5 184 14 7 981 348 318 39 0 chr17 51995739 51995868 -43276783 - Charlie10 DNA MER1_type -2570 252 119 7 981 1006 151 44 11 chr17 51995914 51996095 -43276556 - B2_Mm2 SINE B2 -8 187 1 7 981 245 340 72 0 chr17 51996103 51996200 -43276451 - Charlie10 DNA MER1_type -2714 108 5 7 981 318 202 294 0 chr17 51996436 51996555 -43276096 + L1MD3 LINE L1 7828 7981 -14 7 981 283 315 68 44 chr17 51996597 51996803 -43275848 - LTR81A LTR ERV1? -1073 320 110 7 981 477 0 0 0 chr17 51996982 51997035 -43275616 + (TG)n Simple_repeat Simple_repeat 1 53 0 7 981 932 177 99 0 chr17 51997533 51997725 -43274926 + B3 SINE B2 1 211 -5 7 981 522 0 0 0 chr17 51997837 51997895 -43274756 + (GA)n Simple_repeat Simple_repeat 1 58 0 7 981 450 0 0 0 chr17 51997919 51997969 -43274682 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 981 220 136 0 22 chr17 51998326 51998371 -43274280 + T-rich Low_complexity Low_complexity 4 47 0 7 981 441 214 29 0 chr17 51998377 51998480 -43274171 - B1_Mus2 SINE Alu 0 147 42 7 981 26 30 0 0 chr17 51999053 51999086 -43273565 + AT_rich Low_complexity Low_complexity 1 33 0 7 981 1089 262 75 30 chr17 51999369 51999770 -43272881 - RLTR17 LTR ERVK -73 619 201 7 981 224 261 0 0 chr17 52000855 52000901 -43271750 + B4 SINE B4 26 71 -221 1 981 351 0 0 0 chr17 52000905 52000944 -43271707 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 981 297 0 0 0 chr17 52000944 52000976 -43271675 + (GA)n Simple_repeat Simple_repeat 2 34 0 3 981 310 279 0 11 chr17 52001125 52001212 -43271439 + B3A SINE B2 97 182 -16 4 981 378 0 0 0 chr17 52001227 52001269 -43271382 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 5 981 977 170 119 5 chr17 52001901 52002102 -43270549 + URR1A DNA MER1_type 1 224 -2 6 981 546 288 23 0 chr17 52002120 52002252 -43270399 + RSINE1 SINE B4 28 162 -3 7 981 387 302 55 18 chr17 52002327 52002521 -43270130 + L1MC4a LINE L1 7250 7562 -433 8 981 3163 134 29 7 chr17 52002893 52003305 -43269346 + L1VL4 LINE L1 398 808 -5494 9 981 1124 82 0 0 chr17 52003305 52003452 -43269199 + B1_Mus2 SINE Alu 1 147 0 1 981 3163 120 32 8 chr17 52003452 52003758 -43268893 + L1VL4 LINE L1 809 1135 -2424 9 981 3034 20 42 3 chr17 52003762 52004115 -43268536 + IAPLTR1_Mm LTR ERVK 1 367 0 1 981 40055 22 23 2 chr17 52004115 52008639 -43264012 + IAPEz-int LTR ERVK 8 4623 -1858 1 981 14282 20 2 0 chr17 52008635 52010218 -43262433 + IAPEz-int LTR ERVK 4896 6481 0 1 981 3255 19 0 3 chr17 52010218 52010586 -43262065 + IAPLTR1_Mm LTR ERVK 1 367 0 1 981 4782 84 17 46 chr17 52010610 52011367 -43261284 + L1VL4 LINE L1 1142 1876 -1683 9 981 3491 103 16 14 chr17 52011358 52011870 -43260781 + Lx2 LINE L1 6133 6645 -352 1 981 1465 99 4 18 chr17 52011868 52012094 -43260557 + Lx2 LINE L1 6775 6997 0 1 981 27 0 0 0 chr17 52012094 52012121 -43260530 + AT_rich Low_complexity Low_complexity 1 27 0 1 981 952 55 102 0 chr17 52012273 52012400 -43260251 + B1_Mus2 SINE Alu 2 141 -6 1 981 328 269 124 44 chr17 52013317 52013430 -43259221 - RSINE1 SINE B4 0 165 44 1 981 875 233 38 116 chr17 52013627 52013822 -43258829 + B4 SINE B4 1 205 -87 1 981 234 0 0 0 chr17 52013822 52013848 -43258803 + (TC)n Simple_repeat Simple_repeat 2 27 0 1 981 1801 69 0 16 chr17 52013848 52014100 -43258551 - Lx LINE L1 -9 6645 6398 1 981 875 233 38 116 chr17 52014100 52014195 -43258456 + B4 SINE B4 206 268 -24 1 981 180 0 0 0 chr17 52014208 52014228 -43258423 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 981 234 0 0 0 chr17 52014228 52014253 -43258398 + (TC)n Simple_repeat Simple_repeat 2 27 0 2 981 1214 230 45 42 chr17 52014640 52014976 -43257675 + MER58B DNA MER1_type 1 337 -4 2 981 182 238 15 31 chr17 52015048 52015113 -43257538 + L2c LINE L2 3293 3356 -31 2 981 232 316 30 20 chr17 52016192 52016292 -43256359 + Charlie5 DNA MER1_type 23 123 -2501 2 981 374 211 132 19 chr17 52016299 52016405 -43256246 + PB1D9 SINE Alu 2 119 -1 2 981 237 220 158 68 chr17 52016502 52016692 -43255959 + MER33 DNA MER1_type 51 257 -67 2 981 2521 157 84 14 chr17 52016698 52017125 -43255526 - Lx4A LINE L1 0 7058 6602 2 981 21 0 0 0 chr17 52017125 52017146 -43255505 + AT_rich Low_complexity Low_complexity 1 21 0 2 981 276 30 0 0 chr17 52017207 52017240 -43255411 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 981 495 239 0 9 chr17 52017247 52017357 -43255294 - B1_Mur1 SINE Alu -40 109 1 2 981 264 303 11 0 chr17 52017357 52017437 -43255214 + Charlie5 DNA MER1_type 2543 2623 -1 2 981 1133 69 7 0 chr17 52017447 52017592 -43255059 - B1_Mus1 SINE Alu 0 148 3 3 981 435 277 0 78 chr17 52017745 52017886 -43254765 - B1F SINE Alu 0 149 20 3 981 1163 42 0 27 chr17 52018087 52018233 -43254418 + B1_Mus2 SINE Alu 1 142 -5 3 981 228 311 139 50 chr17 52018537 52018838 -43253813 - LTR78 LTR ERV1 -363 941 614 3 981 180 0 0 0 chr17 52019431 52019451 -43253200 + (A)n Simple_repeat Simple_repeat 1 20 0 3 981 722 32 11 0 chr17 52020114 52020209 -43252442 + MTA_Mm LTR MaLR 300 395 -1 3 981 21 36 0 0 chr17 52020551 52020579 -43252072 + AT_rich Low_complexity Low_complexity 1 28 0 3 981 392 252 113 27 chr17 52020838 52021119 -43251532 - B4A SINE B4 -18 274 1 3 981 801 258 23 43 chr17 52021136 52021428 -43251223 + L1M5 LINE L1 5473 5758 -366 3 981 1233 73 0 0 chr17 52021760 52021938 -43250713 + (CA)n Simple_repeat Simple_repeat 2 179 0 3 981 204 40 0 0 chr17 52021938 52021962 -43250689 + (CG)n Simple_repeat Simple_repeat 2 26 0 4 981 188 111 0 27 chr17 52022336 52022373 -43250278 + (TCCCC)n Simple_repeat Simple_repeat 1 36 0 4 981 1424 68 4 100 chr17 52022781 52023011 -43249640 - L1_Mus1 LINE L1 -127 6440 6233 4 981 764 56 19 0 chr17 52023013 52023121 -43249530 + L1Md_F2 LINE L1 6461 6570 -12 4 981 1577 32 21 0 chr17 52023221 52023409 -43249242 - B2_Mm1t SINE B2 0 193 2 4 981 612 259 29 7 chr17 52023762 52023902 -43248749 - RSINE1 SINE B4 -20 145 3 4 981 2215 121 16 0 chr17 52024145 52024467 -43248184 + ORR1A2 LTR MaLR 1 327 0 4 981 684 172 52 15 chr17 52024720 52024856 -43247795 - B1_Mur4 SINE Alu -8 142 2 4 981 2030 201 51 75 chr17 52024936 52025271 -43247380 + Lx5 LINE L1 6478 6820 -230 4 981 234 0 0 0 chr17 52025271 52025297 -43247354 + (CCTG)n Simple_repeat Simple_repeat 1 26 0 4 981 2030 201 51 75 chr17 52025297 52025362 -43247289 + Lx5 LINE L1 6821 6874 -176 4 981 216 0 0 0 chr17 52025362 52025386 -43247265 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 981 2030 201 51 75 chr17 52025386 52025571 -43247080 + Lx5 LINE L1 6875 7049 -1 4 981 448 213 0 181 chr17 52025678 52025833 -43246818 - B1_Mur1 SINE Alu -1 148 22 5 981 587 212 9 9 chr17 52026187 52026301 -43246350 - B1_Mur1 SINE Alu -1 148 35 5 981 314 111 0 0 chr17 52026301 52026346 -43246305 + MT2B LTR ERVL 170 214 -387 5 981 204 40 0 0 chr17 52026569 52026594 -43246057 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 5 981 915 161 0 20 chr17 52026595 52026747 -43245904 - B1_Mur3 SINE Alu 0 149 1 5 981 996 55 0 0 chr17 52027461 52027588 -43245063 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 5 981 1238 48 0 0 chr17 52027738 52027885 -43244766 + B1_Mus2 SINE Alu 1 147 0 5 981 1460 133 45 15 chr17 52028474 52028760 -43243891 - MT2B2 LTR ERVL -186 398 113 5 981 1234 159 5 0 chr17 52028777 52028991 -43243660 + L1_Mur3 LINE L1 3530 3744 -2136 5 981 526 125 0 0 chr17 52029002 52029082 -43243569 + L1_Mur3 LINE L1 4079 4158 -1722 5 981 856 231 151 17 chr17 52029079 52029370 -43243281 + Lx7 LINE L1 5824 6153 -1543 6 981 3675 232 79 32 chr17 52029369 52029569 -43243082 + Lx6 LINE L1 6520 6739 -721 6 981 540 0 0 0 chr17 52029569 52029629 -43243022 + (CAAAA)n Simple_repeat Simple_repeat 2 61 0 6 981 3675 232 79 32 chr17 52029629 52030323 -43242328 + Lx6 LINE L1 6740 7455 -5 6 981 22 35 0 0 chr17 52030854 52030883 -43241768 + AT_rich Low_complexity Low_complexity 1 29 0 6 981 279 203 0 0 chr17 52031036 52031095 -43241556 + GA-rich Low_complexity Low_complexity 2 60 0 6 981 700 174 0 102 chr17 52031326 52031473 -43241178 - B1_Mur1 SINE Alu 0 149 18 6 981 540 56 0 0 chr17 52032332 52032404 -43240247 + (CA)n Simple_repeat Simple_repeat 1 72 0 6 981 585 243 71 35 chr17 52032893 52033034 -43239617 + RSINE1 SINE B4 3 148 -17 6 981 24 0 0 0 chr17 52033055 52033079 -43239572 + AT_rich Low_complexity Low_complexity 1 24 0 6 981 21 0 0 0 chr17 52033113 52033134 -43239517 + AT_rich Low_complexity Low_complexity 1 21 0 6 981 672 234 14 28 chr17 52033474 52033619 -43239032 - B1_Mur1 SINE Alu -6 143 1 7 981 559 239 30 0 chr17 52033716 52033850 -43238801 - B3 SINE B2 -5 211 74 7 981 5132 118 8 50 chr17 52034330 52035166 -43237485 + Lx4A LINE L1 6258 7058 0 7 981 369 60 0 0 chr17 52035169 52035181 -43237470 + (GA)n Simple_repeat Simple_repeat 2 13 0 7 981 678 25 0 0 chr17 52035181 52035261 -43237390 + (GAA)n Simple_repeat Simple_repeat 1 80 0 7 981 369 60 0 0 chr17 52035261 52035298 -43237353 + (GA)n Simple_repeat Simple_repeat 2 38 0 7 981 471 291 70 14 chr17 52035314 52035457 -43237194 + RSINE1 SINE B4 5 155 -10 7 982 384 333 65 52 chr17 52035650 52035881 -43236770 - LTR33C LTR ERVL -389 240 7 7 982 209 122 0 47 chr17 52035937 52035980 -43236671 + CT-rich Low_complexity Low_complexity 2 42 0 7 982 376 303 62 27 chr17 52036763 52036909 -43235742 + RSINE1 SINE B4 2 152 -13 7 982 659 75 11 0 chr17 52036927 52037021 -43235630 + (TCTA)n Simple_repeat Simple_repeat 2 96 0 8 982 30 0 0 0 chr17 52037040 52037070 -43235581 + AT_rich Low_complexity Low_complexity 1 30 0 8 982 180 0 0 0 chr17 52037666 52037686 -43234965 + (T)n Simple_repeat Simple_repeat 1 20 0 8 982 238 191 21 0 chr17 52038301 52038348 -43234303 - L1M2a LINE L1 -6439 729 682 8 982 200 222 0 0 chr17 52038957 52039002 -43233649 + T-rich Low_complexity Low_complexity 1 45 0 8 982 274 273 15 0 chr17 52040426 52040492 -43232159 + CT-rich Low_complexity Low_complexity 3 69 0 8 982 476 221 29 0 chr17 52040493 52040597 -43232054 - PB1D9 SINE Alu -5 115 9 8 982 293 326 10 10 chr17 52040510 52040609 -43232042 - ID_B1 SINE B4 -48 176 78 8 982 731 210 4 0 chr17 52041580 52041852 -43230799 + (CA)n Simple_repeat Simple_repeat 1 273 0 8 982 291 284 62 0 chr17 52041938 52042019 -43230632 - RSINE1 SINE B4 -29 136 51 8 982 320 268 96 16 chr17 52042276 52042401 -43230250 + Lx7 LINE L1 7273 7407 -289 9 982 311 205 107 12 chr17 52042560 52042644 -43230007 + 4.5SRNA scRNA scRNA 3 94 0 9 982 926 116 14 21 chr17 52042644 52042785 -43229866 + B1_Mur2 SINE Alu 1 140 -9 9 982 1072 101 0 12 chr17 52042808 52042979 -43229672 + (GAAA)n Simple_repeat Simple_repeat 4 172 0 9 982 23 0 0 0 chr17 52043764 52043787 -43228864 + AT_rich Low_complexity Low_complexity 1 23 0 9 982 465 50 0 0 chr17 52044122 52044182 -43228469 + (TG)n Simple_repeat Simple_repeat 1 60 0 9 982 340 337 18 24 chr17 52044220 52044387 -43228264 - B4A SINE B4 -121 171 6 9 982 523 269 112 0 chr17 52044412 52044546 -43228105 - B1_Mur1 SINE Alu 0 149 1 9 982 233 231 123 0 chr17 52044807 52044872 -43227779 + L1M5 LINE L1 5634 5706 -738 9 982 477 282 193 11 chr17 52045103 52045383 -43227268 + MLT1A0 LTR MaLR 20 350 -15 9 982 239 294 23 12 chr17 52046123 52046209 -43226442 - MER63B DNA AcHobo -37 399 313 1 982 490 222 9 18 chr17 52046944 52047054 -43225597 - B1_Mur1 SINE Alu -40 109 1 1 982 262 274 176 13 chr17 52047448 52047607 -43225044 + B3A SINE B2 2 186 -12 1 982 31 0 0 0 chr17 52047909 52047940 -43224711 + AT_rich Low_complexity Low_complexity 1 31 0 1 982 260 243 114 0 chr17 52047940 52048010 -43224641 - ID4 SINE ID -2 81 4 1 982 548 309 145 56 chr17 52048223 52048559 -43224092 - L1ME2z LINE L1 -159 6285 5938 1 982 1230 163 31 44 chr17 52048559 52048784 -43223867 - URR1B DNA MER1_type -3 222 1 1 982 548 309 145 56 chr17 52048784 52049088 -43223563 - L1ME2z LINE L1 -507 5937 5588 1 982 1344 60 16 62 chr17 52049562 52049756 -43222895 - B2_Mm1a SINE B2 -7 186 2 1 982 267 173 0 0 chr17 52051833 52051885 -43220766 + (CAG)n Simple_repeat Simple_repeat 2 53 0 1 982 1247 48 0 0 chr17 52052195 52052342 -43220309 - B1_Mm SINE Alu 0 147 1 1 982 192 306 186 0 chr17 52052468 52052592 -43220059 - L2a LINE L2 -2 3424 3278 1 982 270 370 88 50 chr17 52052743 52053062 -43219589 - L2a LINE L2 -364 3055 2725 1 982 341 43 21 0 chr17 52053291 52053338 -43219313 + (CAA)n Simple_repeat Simple_repeat 1 48 0 1 982 355 239 21 11 chr17 52053441 52053534 -43219117 - L2a LINE L2 -1037 2382 2289 1 982 282 216 0 0 chr17 52053886 52053960 -43218691 + (CAAG)n Simple_repeat Simple_repeat 1 74 0 1 982 189 0 0 0 chr17 52055809 52055830 -43216821 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 982 212 354 0 0 chr17 52056188 52056270 -43216381 + L3b LINE CR1 114 195 -287 1 982 201 39 0 0 chr17 52056325 52056351 -43216300 + (GGGTG)n Simple_repeat Simple_repeat 1 26 0 1 982 213 191 20 41 chr17 52056428 52056477 -43216174 + GA-rich Low_complexity Low_complexity 2 49 0 1 982 738 243 40 60 chr17 52056899 52057100 -43215551 - B3A SINE B2 0 198 2 1 982 26 30 0 0 chr17 52057190 52057223 -43215428 + AT_rich Low_complexity Low_complexity 1 33 0 1 982 792 282 82 7 chr17 52057229 52057508 -43215143 - Lx8 LINE L1 -13 7460 7161 1 982 1184 101 0 6 chr17 52057703 52057882 -43214769 + (TTC)n Simple_repeat Simple_repeat 1 178 0 1 982 333 68 0 0 chr17 52057882 52057926 -43214725 + (TCC)n Simple_repeat Simple_repeat 3 46 0 1 982 2382 89 38 0 chr17 52058131 52058446 -43214205 - ORR1A2 LTR MaLR 0 327 1 1 982 22 70 0 0 chr17 52059423 52059466 -43213185 + AT_rich Low_complexity Low_complexity 1 43 0 1 982 414 331 54 16 chr17 52059532 52059716 -43212935 + Arthur1B DNA Tip100 230 420 -805 1 982 324 310 63 8 chr17 52059860 52059991 -43212660 + B4 SINE B4 1 137 -155 1 982 4435 51 4 5 chr17 52060059 52060610 -43212041 + L1Md_F2 LINE L1 5037 5586 -297 1 982 8010 58 6 6 chr17 52060610 52061606 -43211045 + L1Md_F2 LINE L1 5587 6582 0 1 982 3195 265 84 13 chr17 52061628 52062504 -43210147 + Lx7 LINE L1 6419 7357 -339 1 982 233 238 62 12 chr17 52062572 52062653 -43209998 + Lx8 LINE L1 7360 7444 -29 1 982 953 152 14 0 chr17 52062655 52062800 -43209851 - B1_Mur2 SINE Alu -2 147 1 1 982 207 0 0 0 chr17 52063068 52063091 -43209560 + (CATATA)n Simple_repeat Simple_repeat 2 24 0 1 982 485 246 150 8 chr17 52063292 52063419 -43209232 + B1_Mur1 SINE Alu 2 146 -3 1 982 586 239 64 37 chr17 52063544 52063731 -43208920 - Lx7 LINE L1 0 7696 7505 1 982 237 222 43 43 chr17 52063791 52063885 -43208766 + L1MA10 LINE L1 6166 6259 -75 1 982 611 235 70 21 chr17 52064044 52064072 -43208579 - B3A SINE B2 0 198 172 1 982 504 48 0 0 chr17 52064072 52064135 -43208516 + (CGTG)n Simple_repeat Simple_repeat 1 63 0 1 982 611 235 70 21 chr17 52064135 52064293 -43208358 - B3A SINE B2 -27 171 3 1 982 985 227 43 5 chr17 52064640 52064848 -43207803 - B3 SINE B2 0 216 1 1 982 26 0 0 0 chr17 52064888 52064914 -43207737 + AT_rich Low_complexity Low_complexity 1 26 0 1 982 227 186 222 28 chr17 52064916 52064988 -43207663 - L1MEc LINE L1 -1389 4930 4845 1 982 21 0 0 0 chr17 52065739 52065760 -43206891 + AT_rich Low_complexity Low_complexity 1 21 0 1 982 2194 290 80 22 chr17 52065761 52066651 -43206000 - L1M5 LINE L1 -881 5265 4325 1 982 331 234 121 84 chr17 52067005 52067257 -43205394 - L1MEc LINE L1 -1989 4330 4067 1 982 304 320 91 18 chr17 52067612 52067898 -43204753 - L1MEc LINE L1 -2659 3660 3354 1 982 1799 250 38 9 chr17 52067911 52067953 -43204698 - Lx6 LINE L1 -84 7376 7327 1 982 405 0 0 0 chr17 52067953 52067998 -43204653 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 1 982 1799 261 51 13 chr17 52067998 52069071 -43203580 - Lx6 LINE L1 -134 7326 5929 1 982 536 300 6 61 chr17 52069334 52069515 -43203136 - B4 SINE B4 -121 171 1 1 982 2874 244 102 19 chr17 52069540 52070501 -43202150 - L1MEc LINE L1 -5226 1174 134 1 982 253 301 0 0 chr17 52070634 52070707 -43201944 - PB1D10 SINE Alu 0 117 45 1 982 612 286 19 7 chr17 52070829 52070984 -43201667 - RSINE1 SINE B4 -8 157 1 1 982 1164 102 74 0 chr17 52071180 52071356 -43201295 - B2_Mm2 SINE B2 -5 190 2 1 982 24 32 0 0 chr17 52071365 52071396 -43201255 + AT_rich Low_complexity Low_complexity 1 31 0 1 982 1610 217 122 17 chr17 52071787 52072260 -43200391 - MT2B LTR ERVL -110 491 3 1 982 412 321 0 30 chr17 52072263 52072430 -43200221 - Lx9 LINE L1 -1592 6052 5891 1 982 4098 197 116 27 chr17 52072521 52073517 -43199134 + Lx4B LINE L1 5966 7049 -9 1 982 1173 105 6 6 chr17 52073544 52073726 -43198925 + ORR1A4 LTR MaLR 148 329 0 1 982 28 61 0 0 chr17 52074586 52074635 -43198016 + AT_rich Low_complexity Low_complexity 1 49 0 1 982 195 100 0 0 chr17 52074640 52074670 -43197981 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 982 664 305 6 6 chr17 52074684 52074862 -43197789 - B3A SINE B2 -18 180 3 1 982 21 0 0 0 chr17 52074862 52074883 -43197768 + AT_rich Low_complexity Low_complexity 1 21 0 1 982 377 241 98 98 chr17 52075167 52075360 -43197291 - B3A SINE B2 -3 195 3 1 982 1246 48 0 0 chr17 52076065 52076212 -43196439 - B1_Mus1 SINE Alu -1 147 1 1 982 1508 241 31 18 chr17 52076508 52076961 -43195690 - RCHARR1 DNA MER1_type -38 936 478 1 982 314 287 35 0 chr17 52076977 52077064 -43195587 - B3 SINE B2 -14 202 113 1 982 305 286 143 0 chr17 52077071 52077169 -43195482 + RMER20A LTR ERVK 405 516 0 1 982 364 214 281 6 chr17 52077174 52077334 -43195317 + ORR1D2 LTR MaLR 171 374 0 1 982 342 319 61 67 chr17 52077366 52077727 -43194924 + MTEb LTR MaLR 1 379 0 1 982 672 83 0 0 chr17 52078917 52079013 -43193638 + (TCCC)n Simple_repeat Simple_repeat 1 96 0 1 982 285 29 0 0 chr17 52079149 52079183 -43193468 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 1 982 189 0 0 0 chr17 52079570 52079591 -43193060 + (T)n Simple_repeat Simple_repeat 1 21 0 1 982 453 269 117 0 chr17 52079633 52079778 -43192873 - RSINE1 SINE B4 0 165 4 1 982 216 0 0 0 chr17 52079844 52079868 -43192783 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 982 273 135 0 0 chr17 52080415 52080467 -43192184 + (TCTA)n Simple_repeat Simple_repeat 3 54 0 1 982 1092 89 0 0 chr17 52080467 52080647 -43192004 + (TATG)n Simple_repeat Simple_repeat 1 180 0 1 982 459 0 0 0 chr17 52080647 52080698 -43191953 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 1 982 780 229 7 0 chr17 52080717 52080861 -43191790 - RSINE1 SINE B4 -17 148 4 1 982 3053 53 0 8 chr17 52081218 52081598 -43191053 - L1Md_F2 LINE L1 -12 6570 6194 1 982 347 311 69 20 chr17 52082377 52082580 -43190071 + L1ME1 LINE L1 5471 5683 -496 1 982 195 42 0 0 chr17 52082605 52082629 -43190022 + (TCTCTG)n Simple_repeat Simple_repeat 3 26 0 1 982 583 297 146 0 chr17 52082690 52082882 -43189769 - B4 SINE B4 -66 226 7 1 982 271 291 107 91 chr17 52082935 52083177 -43189474 - B4A SINE B4 -43 249 4 1 982 601 252 136 81 chr17 52083202 52083534 -43189117 + L1ME1 LINE L1 5733 6082 -97 1 982 733 226 0 82 chr17 52083532 52083715 -43188936 + Lx5 LINE L1 6880 7047 -3 1 982 240 213 0 0 chr17 52084035 52084082 -43188569 + (CATATA)n Simple_repeat Simple_repeat 5 51 0 1 982 547 297 82 39 chr17 52084127 52084407 -43188244 - B4A SINE B4 0 292 1 1 982 212 285 125 44 chr17 52085039 52085175 -43187476 - L2a LINE L2 0 3375 3229 1 982 333 292 30 30 chr17 52085295 52085461 -43187190 - L2a LINE L2 -303 3123 2958 1 982 1168 75 0 0 chr17 52085534 52085680 -43186971 - B1_Mus2 SINE Alu 0 147 2 1 982 547 307 74 47 chr17 52085756 52086012 -43186639 + MT2A LTR ERVL 153 415 -118 1 982 681 13 0 0 chr17 52086047 52086125 -43186526 + (GGGAGA)n Simple_repeat Simple_repeat 5 82 0 1 982 1478 253 20 54 chr17 52086917 52087360 -43185291 + RMER19C LTR ERVK 126 553 -58 1 982 1392 182 125 10 chr17 52087351 52087656 -43184995 + MTD LTR MaLR 65 404 -15 1 982 3402 50 89 9 chr17 52087696 52088136 -43184515 + IAPLTR2_Mm LTR ERVK 1 475 0 1 982 4317 91 15 40 chr17 52088137 52088892 -43183759 + IAPEz-int LTR ERVK 9 662 -5819 1 982 2700 73 0 3 chr17 52088892 52089235 -43183416 + IAPEz-int LTR ERVK 1359 1700 -4781 1 982 6380 65 12 18 chr17 52089228 52090062 -43182589 + IAPEz-int LTR ERVK 5651 6479 -2 1 982 3429 46 89 9 chr17 52090064 52090504 -43182147 + IAPLTR2_Mm LTR ERVK 1 475 0 1 982 25 51 0 0 chr17 52092876 52092915 -43179736 + AT_rich Low_complexity Low_complexity 1 39 0 1 982 258 32 0 0 chr17 52093777 52093808 -43178843 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 982 1514 256 26 29 chr17 52093813 52094157 -43178494 - MTEa LTR MaLR 0 379 35 1 982 1483 201 87 20 chr17 52094157 52094503 -43178148 + ORR1D2 LTR MaLR 1 369 -1 1 982 1514 256 26 29 chr17 52094503 52094536 -43178115 - MTEa LTR MaLR -345 34 3 1 982 189 94 0 0 chr17 52094660 52094692 -43177959 + (GGAA)n Simple_repeat Simple_repeat 2 33 0 1 982 678 85 0 0 chr17 52094820 52094914 -43177737 + (TTTC)n Simple_repeat Simple_repeat 3 96 0 1 982 296 271 16 25 chr17 52096814 52096935 -43175716 + L1MA9 LINE L1 6192 6311 -1 1 982 1541 161 43 7 chr17 52096949 52097231 -43175420 + ORR1A2 LTR MaLR 36 327 0 1 982 4104 75 5 18 chr17 52097231 52098021 -43174630 - L1VL4 LINE L1 -2361 1198 422 1 982 2716 237 70 50 chr17 52098024 52098455 -43174196 - Lx6 LINE L1 -15 7681 6977 1 982 314 23 23 0 chr17 52098455 52098498 -43174153 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 1 982 2716 242 24 14 chr17 52098498 52098579 -43174072 - Lx6 LINE L1 -484 6976 6896 1 982 533 15 15 0 chr17 52098579 52098645 -43174006 + (TC)n Simple_repeat Simple_repeat 2 68 0 1 982 2716 242 24 14 chr17 52098645 52098752 -43173899 - Lx6 LINE L1 -565 6895 6784 1 982 428 259 102 57 chr17 52098876 52099122 -43173529 - L1MD LINE L1 -743 5403 5147 1 982 620 293 79 83 chr17 52099217 52099734 -43172917 + L1ME2 LINE L1 5554 6068 -96 2 982 1020 216 238 12 chr17 52099810 52100133 -43172518 - MTD LTR MaLR -16 403 8 2 982 557 271 59 0 chr17 52101495 52101567 -43171084 - B3A SINE B2 -17 181 105 2 982 342 0 0 0 chr17 52101567 52101605 -43171046 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 982 557 271 59 0 chr17 52101605 52101702 -43170949 - B3A SINE B2 -94 104 4 2 982 341 43 0 21 chr17 52102851 52102899 -43169752 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 982 693 262 83 0 chr17 52102907 52103075 -43169576 - B3A SINE B2 -16 182 1 2 982 565 239 150 66 chr17 52103113 52103476 -43169175 + RMER20B LTR ERVK 214 601 -26 2 982 22 35 0 0 chr17 52104287 52104316 -43168335 + AT_rich Low_complexity Low_complexity 1 29 0 2 982 206 32 32 0 chr17 52104333 52104364 -43168287 + (TTTTTG)n Simple_repeat Simple_repeat 3 34 0 2 982 558 208 38 0 chr17 52104369 52104475 -43168176 - B1_Mur2 SINE Alu 0 149 40 2 982 355 277 0 0 chr17 52104467 52104561 -43168090 + Charlie20a DNA Charlie 87 180 -627 2 982 522 180 69 43 chr17 52104811 52104927 -43167724 + PB1D9 SINE Alu 2 120 0 2 982 387 0 0 0 chr17 52106174 52106217 -43166434 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 982 1287 102 0 0 chr17 52107491 52107768 -43164883 + (TCTA)n Simple_repeat Simple_repeat 1 277 0 2 982 436 176 0 12 chr17 52107802 52107888 -43164763 - MTC LTR MaLR -2 419 335 2 982 192 200 0 0 chr17 52108016 52108056 -43164595 + (TA)n Simple_repeat Simple_repeat 1 40 0 2 982 8429 42 4 1 chr17 52108056 52109150 -43163501 - L1Md_F2 LINE L1 -8 6574 5466 2 982 1546 163 73 32 chr17 52109150 52109466 -43163185 - MTC LTR MaLR -78 343 15 2 982 1716 159 79 6 chr17 52109671 52110001 -43162650 - ORR1B1 LTR MaLR 0 394 41 2 982 393 327 20 0 chr17 52110754 52110855 -43161796 - PB1D10 SINE Alu -13 104 2 2 982 252 0 0 0 chr17 52111100 52111128 -43161523 + (A)n Simple_repeat Simple_repeat 1 28 0 2 982 225 154 0 0 chr17 52111323 52111362 -43161289 + (CG)n Simple_repeat Simple_repeat 1 39 0 2 982 549 338 13 0 chr17 52112619 52112776 -43159875 + RSINE1 SINE B4 3 161 -4 2 982 518 273 28 14 chr17 52112992 52113133 -43159518 + B1F SINE Alu 5 147 -2 2 982 194 309 42 21 chr17 52113438 52113534 -43159117 + MER5A DNA MER1_type 92 189 0 2 982 1134 118 0 6 chr17 52116794 52116964 -43155687 + ORR1C2 LTR MaLR 3 171 -213 2 982 1643 178 32 49 chr17 52116966 52117341 -43155310 + RLTR20C LTR ERVK 1 477 -101 2 982 306 0 0 0 chr17 52117341 52117375 -43155276 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 982 471 246 99 28 chr17 52117375 52117450 -43155201 + RLTR20C LTR ERVK 478 562 -16 2 982 1017 161 41 91 chr17 52117451 52117612 -43155039 + ORR1C2 LTR MaLR 177 345 -39 2 982 2464 54 10 0 chr17 52117612 52117909 -43154742 + L1Md_F3 LINE L1 6271 6570 -14 2 982 1017 161 41 91 chr17 52117909 52117966 -43154685 + ORR1C2 LTR MaLR 346 384 0 2 982 261 0 0 0 chr17 52118515 52118544 -43154107 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 982 396 0 0 0 chr17 52118544 52118587 -43154064 + (GA)n Simple_repeat Simple_repeat 2 45 0 2 982 808 258 42 38 chr17 52120044 52120282 -43152369 + Lx8 LINE L1 6814 7052 -421 2 982 293 269 145 0 chr17 52120354 52120499 -43152152 + Lx8 LINE L1 7301 7466 -7 2 982 794 11 11 0 chr17 52120869 52120964 -43151687 + (GA)n Simple_repeat Simple_repeat 1 96 0 2 982 680 232 6 0 chr17 52121395 52121572 -43151079 + CT-rich Low_complexity Low_complexity 3 180 0 2 982 216 0 0 0 chr17 52121572 52121596 -43151055 + (TCCC)n Simple_repeat Simple_repeat 1 24 0 2 982 939 140 0 22 chr17 52121596 52121779 -43150872 + CT-rich Low_complexity Low_complexity 2 180 0 2 982 186 189 0 0 chr17 52121797 52121834 -43150817 + CT-rich Low_complexity Low_complexity 1 37 0 2 982 469 299 0 0 chr17 52121835 52121952 -43150699 - ID_B1 SINE B4 -4 220 104 2 982 248 289 10 82 chr17 52122228 52122326 -43150325 + Kanga11a DNA Tc2 871 961 -9 2 982 243 288 101 57 chr17 52122565 52122807 -43149844 - MTEa LTR MaLR -56 323 43 2 982 198 217 21 32 chr17 52123552 52123647 -43149004 + (TATG)n Simple_repeat Simple_repeat 1 94 0 2 982 639 282 7 7 chr17 52124368 52124518 -43148133 + RSINE1 SINE B4 2 151 -14 2 982 634 274 14 0 chr17 52124538 52124684 -43147967 + B1F SINE Alu 1 148 -1 2 982 207 100 0 0 chr17 52126873 52126903 -43145748 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 2 982 306 0 0 0 chr17 52127494 52127528 -43145123 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 982 322 297 106 35 chr17 52128025 52128224 -43144427 - MLT1L LTR MaLR -16 594 382 2 982 207 0 0 0 chr17 52128549 52128572 -43144079 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 982 622 331 39 43 chr17 52128612 52128868 -43143783 + MER2 DNA MER2_type 86 340 -5 2 982 318 26 0 0 chr17 52128904 52128943 -43143708 + (A)n Simple_repeat Simple_repeat 1 39 0 2 982 2619 249 79 25 chr17 52129270 52130057 -43142594 + RCHARR1 DNA MER1_type 1 829 -145 2 982 313 323 75 52 chr17 52130576 52130749 -43141902 + LTR16C LTR ERVL 211 387 -102 2 982 457 215 62 45 chr17 52131742 52131854 -43140797 + PB1D9 SINE Alu 7 120 0 2 982 234 318 160 39 chr17 52133412 52133844 -43138807 + L1MD3 LINE L1 4766 5249 -897 2 982 23 0 0 0 chr17 52133858 52133881 -43138770 + AT_rich Low_complexity Low_complexity 1 23 0 2 982 264 269 15 0 chr17 52133950 52134017 -43138634 + ID4_ SINE ID 2 69 -14 2 982 392 336 194 17 chr17 52134039 52134513 -43138138 + L1MD3 LINE L1 5326 5889 -2106 2 982 189 0 0 0 chr17 52134513 52134534 -43138117 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 982 392 336 194 17 chr17 52134534 52134601 -43138050 + L1MD3 LINE L1 5890 5963 -2032 2 982 276 273 90 144 chr17 52134856 52135051 -43137600 + L1MD3 LINE L1 6303 6506 -1376 2 982 1214 62 7 0 chr17 52135051 52135197 -43137454 + B1_Mus2 SINE Alu 1 147 0 2 982 276 273 90 144 chr17 52135197 52135369 -43137282 + L1MD3 LINE L1 6507 6650 -1232 2 982 772 40 10 0 chr17 52135457 52135558 -43137093 - L1Md_T LINE L1 0 6582 6481 2 982 1559 48 0 0 chr17 52135558 52135746 -43136905 + L1Md_A LINE L1 5862 6049 -533 2 982 672 279 16 16 chr17 52135994 52136183 -43136468 + B3A SINE B2 3 191 -7 2 982 186 71 0 0 chr17 52136408 52136436 -43136215 + (CAA)n Simple_repeat Simple_repeat 2 29 0 2 982 315 329 85 7 chr17 52136442 52136595 -43136056 + L1MD3 LINE L1 7509 7673 -209 2 982 305 348 35 28 chr17 52136744 52136886 -43135765 - MIRb SINE MIR -14 254 112 2 982 287 259 67 45 chr17 52138120 52138209 -43134442 - MIRm SINE MIR -4 272 182 2 982 1206 74 0 0 chr17 52138524 52138686 -43133965 + (TCTA)n Simple_repeat Simple_repeat 4 165 0 2 982 856 203 39 13 chr17 52138688 52138843 -43133808 - RSINE1 SINE B4 -1 164 6 2 982 792 279 60 97 chr17 52139214 52139642 -43133009 - Ricksha_0 DNA MuDR -131 1602 1194 2 982 1869 199 14 76 chr17 52139642 52140088 -43132563 + MTD LTR MaLR 2 419 0 2 982 792 279 60 97 chr17 52140088 52140144 -43132507 - Ricksha_0 DNA MuDR -540 1193 1136 2 982 557 280 99 12 chr17 52140466 52140708 -43131943 - Ricksha_0 DNA MuDR -999 734 472 2 982 207 25 75 0 chr17 52140785 52140825 -43131826 + (TTTTTG)n Simple_repeat Simple_repeat 3 45 0 2 982 1287 34 0 14 chr17 52140825 52140973 -43131678 - B1_Mm SINE Alu 0 147 2 2 982 861 200 86 0 chr17 52141358 52141533 -43131118 + MTD LTR MaLR 230 419 0 2 982 731 230 0 0 chr17 52141561 52141696 -43130955 + B1_Mur2 SINE Alu 6 140 -9 2 982 228 245 0 0 chr17 52141697 52141746 -43130905 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 2 982 3870 160 107 3 chr17 52142055 52142750 -43129901 + Lx5 LINE L1 6284 7050 0 2 982 423 0 0 0 chr17 52143711 52143758 -43128893 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 982 717 233 13 33 chr17 52143910 52144061 -43128590 - B1_Mur2 SINE Alu -1 148 1 2 982 507 33 0 0 chr17 52144166 52144227 -43128424 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 982 967 238 24 14 chr17 52147039 52147252 -43125399 + B3 SINE B2 2 216 0 2 982 829 248 0 43 chr17 52147455 52147666 -43124985 - RMER10B LTR ERVL 0 398 197 2 982 528 200 0 0 chr17 52147668 52147783 -43124868 + GA-rich Low_complexity Low_complexity 1 115 0 2 982 1261 208 31 19 chr17 52147785 52147836 -43124815 - RMER10B LTR ERVL -135 263 209 2 982 1179 94 0 0 chr17 52147836 52148016 -43124635 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 982 1261 208 31 19 chr17 52148016 52148224 -43124427 - RMER10B LTR ERVL -190 208 1 2 982 705 95 0 0 chr17 52148965 52149081 -43123570 + (TC)n Simple_repeat Simple_repeat 1 116 0 2 982 238 266 0 81 chr17 52150914 52151000 -43121651 + B1_Mm SINE Alu 12 90 -57 2 982 200 189 0 36 chr17 52151917 52151972 -43120679 + G-rich Low_complexity Low_complexity 1 53 0 2 982 1424 221 73 3 chr17 52151997 52152341 -43120310 - ORR1D2 LTR MaLR -2 368 1 2 982 227 31 31 0 chr17 52153004 52153036 -43119615 + (CAT)n Simple_repeat Simple_repeat 2 34 0 2 982 505 255 0 0 chr17 52153045 52153151 -43119500 - B1_Mur2 SINE Alu -11 138 33 2 982 353 86 0 17 chr17 52153328 52153387 -43119264 + (TTTTTA)n Simple_repeat Simple_repeat 2 59 0 2 982 1236 68 0 0 chr17 52153393 52153540 -43119111 - B1_Mm SINE Alu 0 147 1 2 982 228 194 145 0 chr17 52154342 52154404 -43118247 + tRNA-Gly-GGY tRNA tRNA 1 71 -3 2 982 201 182 0 0 chr17 52154885 52154918 -43117733 + T-rich Low_complexity Low_complexity 1 33 0 2 982 840 249 0 70 chr17 52155465 52155651 -43117000 + B3A SINE B2 10 182 -16 2 982 198 0 0 0 chr17 52155694 52155716 -43116935 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2 982 709 202 0 30 chr17 52155723 52155856 -43116795 - B1_Mus1 SINE Alu -18 130 2 2 982 189 0 0 0 chr17 52156155 52156176 -43116475 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 982 414 191 15 7 chr17 52156176 52156313 -43116338 + (TA)n Simple_repeat Simple_repeat 2 139 0 2 982 717 297 84 52 chr17 52156710 52157055 -43115596 - ORR1E LTR MaLR 0 359 4 2 982 268 352 102 0 chr17 52157101 52157229 -43115422 - MLT1A0 LTR MaLR -12 353 213 2 982 1003 227 35 0 chr17 52158320 52158523 -43114128 - B3 SINE B2 -1 215 6 2 982 26 30 0 0 chr17 52158604 52158637 -43114014 + AT_rich Low_complexity Low_complexity 1 33 0 2 982 305 204 36 48 chr17 52158689 52158798 -43113853 - MIRm SINE MIR -107 161 50 2 982 423 0 0 0 chr17 52158816 52158863 -43113788 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 982 249 0 0 0 chr17 52159862 52159891 -43112760 + MTD LTR MaLR 18 46 -373 3 982 297 0 0 0 chr17 52160611 52160644 -43112007 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 982 1143 87 0 0 chr17 52160644 52160782 -43111869 - B1_Mus1 SINE Alu -10 138 1 3 982 3696 81 38 0 chr17 52161074 52161544 -43111107 - L1_Mus1 LINE L1 -6 6561 6074 3 982 788 282 0 18 chr17 52162284 52162450 -43110201 + RSINE1 SINE B4 3 165 0 3 982 331 226 118 34 chr17 52163203 52163322 -43109329 - MER5A DNA MER1_type -55 134 6 3 982 324 349 89 40 chr17 52163418 52163642 -43109009 - MLT1F LTR MaLR -91 457 223 3 982 679 274 21 115 chr17 52163936 52164171 -43108480 - MTE2a LTR MaLR -1 378 166 3 982 1532 164 42 0 chr17 52164174 52164437 -43108214 - Lx2 LINE L1 0 6997 6724 3 982 2104 84 17 0 chr17 52164437 52164724 -43107927 - Lx2 LINE L1 -970 6027 5736 3 982 6173 150 26 0 chr17 52164723 52165731 -43106920 + Lx2 LINE L1 4706 5739 -144 3 982 690 224 72 4 chr17 52166244 52166433 -43106218 - ORR1D1 LTR MaLR -1 383 180 3 982 399 145 0 0 chr17 52166439 52166508 -43106143 + (CA)n Simple_repeat Simple_repeat 1 69 0 3 983 359 241 135 0 chr17 52168074 52168292 -43104359 - L1M4 LINE L1 -759 5415 5159 3 983 341 109 0 45 chr17 52168553 52168595 -43104056 + polypurine Low_complexity Low_complexity 4 45 0 3 983 1020 79 0 0 chr17 52168595 52168734 -43103917 + (GAGAA)n Simple_repeat Simple_repeat 5 143 0 3 983 341 109 0 45 chr17 52168734 52168758 -43103893 + polypurine Low_complexity Low_complexity 46 66 0 3 983 35 78 0 0 chr17 52169162 52169239 -43103412 + AT_rich Low_complexity Low_complexity 1 77 0 3 983 275 0 0 28 chr17 52171268 52171304 -43101347 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 983 693 258 20 55 chr17 52171782 52171983 -43100668 - B3A SINE B2 0 198 5 3 983 843 179 0 0 chr17 52172046 52172253 -43100398 + (TCTA)n Simple_repeat Simple_repeat 1 207 0 3 983 255 321 71 0 chr17 52172266 52172378 -43100273 + L1M5 LINE L1 5037 5156 -990 3 983 676 263 91 68 chr17 52172447 52172950 -43099701 + L1M5 LINE L1 5254 5782 -382 3 983 261 234 62 0 chr17 52173099 52173163 -43099488 + ID4_ SINE ID 7 74 -9 3 983 212 167 0 0 chr17 52173175 52173211 -43099440 + CT-rich Low_complexity Low_complexity 1 36 0 3 983 685 61 20 0 chr17 52173211 52173310 -43099341 + (TCTA)n Simple_repeat Simple_repeat 4 104 0 3 983 341 240 147 0 chr17 52173357 52173432 -43099219 - B1F SINE Alu -63 86 1 3 983 23 0 0 0 chr17 52173436 52173459 -43099192 + AT_rich Low_complexity Low_complexity 1 23 0 3 983 1043 274 104 42 chr17 52174173 52174528 -43098123 - MTD LTR MaLR 0 419 43 3 983 685 274 239 0 chr17 52174907 52175213 -43097438 + MTEb LTR MaLR 1 379 0 3 983 643 296 82 39 chr17 52176347 52176554 -43096097 + B3 SINE B2 1 216 0 3 983 182 118 29 0 chr17 52176778 52176812 -43095839 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 983 308 275 29 0 chr17 52176838 52176907 -43095744 - B4A SINE B4 0 292 222 3 983 864 267 19 10 chr17 52176908 52177116 -43095535 - B3 SINE B2 -4 212 3 3 983 6706 129 37 49 chr17 52177141 52178283 -43094368 - Lx2 LINE L1 -6 6991 5864 3 983 512 256 167 22 chr17 52178345 52178525 -43094126 - RMER12 LTR ERVK -115 1207 1002 3 983 286 192 76 87 chr17 52178559 52178682 -43093969 - RMER12 LTR ERVK -580 742 633 3 983 2305 155 122 26 chr17 52178666 52179208 -43093443 - RMER12 LTR ERVK -311 1011 418 3 983 9389 98 26 12 chr17 52179227 52179244 -43093407 - Lx3A LINE L1 0 6981 6968 3 983 360 0 0 0 chr17 52179244 52179284 -43093367 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 3 983 9389 83 22 9 chr17 52179284 52181562 -43091089 - Lx3A LINE L1 -14 6967 4654 3 983 5078 4 0 0 chr17 52181564 52182121 -43090530 + L1Md_A LINE L1 5030 5586 -297 3 983 9644 2 0 0 chr17 52182121 52183117 -43089534 + L1Md_A LINE L1 5587 6582 0 3 983 276 30 0 0 chr17 52183346 52183379 -43089272 + (A)n Simple_repeat Simple_repeat 1 33 0 3 983 231 61 0 0 chr17 52183398 52183431 -43089220 + (T)n Simple_repeat Simple_repeat 1 33 0 3 983 4455 75 7 3 chr17 52183431 52184049 -43088602 - Lx3A LINE L1 -1244 4642 4023 3 983 1848 183 57 24 chr17 52184050 52184466 -43088185 - L1_Mur1 LINE L1 -6185 797 216 3 983 2241 185 27 20 chr17 52184467 52184909 -43087742 - RMER12 LTR ERVK -877 445 1 3 983 3012 202 64 8 chr17 52184979 52185603 -43087048 - Lx7 LINE L1 -1201 6495 5837 3 983 259 241 0 0 chr17 52185608 52185662 -43086989 - B4A SINE B4 -205 87 34 3 983 1104 277 40 7 chr17 52185792 52186090 -43086561 + Lx8 LINE L1 7158 7465 -8 3 983 891 299 86 15 chr17 52186294 52186817 -43085834 + L1MB3 LINE L1 5272 5831 -352 3 983 491 297 0 0 chr17 52186817 52186928 -43085723 + B1_Mur1 SINE Alu 2 112 -37 3 983 210 118 0 0 chr17 52186935 52186969 -43085682 + (TGG)n Simple_repeat Simple_repeat 2 35 0 3 983 312 137 0 0 chr17 52186967 52187018 -43085633 + (TATG)n Simple_repeat Simple_repeat 4 54 0 3 983 321 301 75 40 chr17 52187019 52187284 -43085367 + L1MB3 LINE L1 5826 6097 -86 3 983 2750 289 48 23 chr17 52187320 52188581 -43084070 + L1M2 LINE L1 2213 3504 -2639 3 983 736 250 0 91 chr17 52188583 52188759 -43083892 + B3A SINE B2 4 163 -35 3 983 216 0 0 0 chr17 52188873 52188897 -43083754 + (T)n Simple_repeat Simple_repeat 1 24 0 3 983 1324 34 0 0 chr17 52188897 52189044 -43083607 - B1_Mm SINE Alu 0 147 1 3 983 764 300 33 20 chr17 52189048 52189351 -43083300 + L1_Mur3 LINE L1 3515 3821 -2059 3 983 421 250 46 0 chr17 52189390 52189498 -43083153 + L1M2 LINE L1 4697 4809 -1334 3 983 1593 295 134 38 chr17 52189616 52190517 -43082134 - Lx9 LINE L1 -79 7565 6578 3 983 432 0 0 0 chr17 52190660 52190708 -43081943 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 983 864 242 20 40 chr17 52190715 52190913 -43081738 + Lx9 LINE L1 6362 6555 -1089 3 983 438 265 42 7 chr17 52190916 52191083 -43081568 + L1M2 LINE L1 4812 5015 -1128 3 983 463 255 33 37 chr17 52191517 52191674 -43080977 + L1M2 LINE L1 5442 5618 -694 3 983 232 284 7 0 chr17 52191675 52191727 -43080924 + B4A SINE B4 231 284 -8 3 983 353 22 22 0 chr17 52191763 52191809 -43080842 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 983 25 31 0 0 chr17 52192322 52192354 -43080297 + AT_rich Low_complexity Low_complexity 1 32 0 3 983 594 41 0 0 chr17 52192665 52192738 -43079913 + (TATATG)n Simple_repeat Simple_repeat 2 74 0 3 983 234 116 0 0 chr17 52193297 52193340 -43079311 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 983 255 31 0 0 chr17 52193391 52193423 -43079228 + (CCAA)n Simple_repeat Simple_repeat 3 34 0 3 983 2449 279 116 16 chr17 52193425 52194261 -43078390 - Lx7 LINE L1 -388 7308 6389 3 983 293 235 0 0 chr17 52194381 52194432 -43078219 - Lx8 LINE L1 -174 7299 7249 3 983 1388 237 20 82 chr17 52194566 52194970 -43077681 - MTE2a LTR MaLR 0 379 1 3 983 287 136 0 17 chr17 52195258 52195318 -43077333 + A-rich Low_complexity Low_complexity 2 60 0 3 983 194 81 0 26 chr17 52195417 52195455 -43077196 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 3 983 1248 238 28 21 chr17 52195457 52195745 -43076906 - Lx6 LINE L1 -33 7427 7138 3 983 1419 234 38 11 chr17 52196106 52196473 -43076178 - Lx5 LINE L1 -833 6217 5841 3 983 4219 172 68 14 chr17 52196472 52197128 -43075523 + Lx5 LINE L1 6229 6900 -150 3 983 279 0 0 0 chr17 52197128 52197159 -43075492 + (TC)n Simple_repeat Simple_repeat 2 32 0 3 983 225 0 0 0 chr17 52197159 52197183 -43075468 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 983 4219 172 68 14 chr17 52197183 52197303 -43075348 + Lx5 LINE L1 6901 7047 -3 3 983 517 205 56 78 chr17 52197588 52197768 -43074883 + Lx7 LINE L1 7521 7696 0 3 983 322 348 17 0 chr17 52198595 52198710 -43073941 - MER5B DNA MER1_type -3 175 59 3 983 270 0 0 0 chr17 52198829 52198859 -43073792 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 3 983 3790 30 0 11 chr17 52198902 52199336 -43073315 + L1Md_F2 LINE L1 6151 6579 -3 3 983 1037 90 5 38 chr17 52200863 52201047 -43071604 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 3 983 296 80 0 57 chr17 52201047 52201100 -43071551 + (GAAA)n Simple_repeat Simple_repeat 1 50 0 3 983 312 349 73 13 chr17 52201116 52201267 -43071384 + HAL1-3A_ME LINE L1 2284 2443 -415 3 983 915 215 0 0 chr17 52201949 52202126 -43070525 - URR1B DNA MER1_type 0 225 49 3 983 386 212 25 0 chr17 52203423 52203503 -43069148 - PB1D10 SINE Alu -35 82 1 3 983 575 324 90 45 chr17 52203646 52203979 -43068672 - ORR1E LTR MaLR -11 348 1 3 983 294 294 52 81 chr17 52205445 52205661 -43066990 - ORR1E LTR MaLR 0 379 172 3 983 1210 70 0 0 chr17 52205661 52205803 -43066848 + B1_Mm SINE Alu 5 146 -1 3 983 576 0 0 0 chr17 52205806 52205870 -43066781 + (GA)n Simple_repeat Simple_repeat 1 64 0 3 983 294 336 55 118 chr17 52205870 52206025 -43066626 - ORR1E LTR MaLR -188 171 14 3 983 335 275 120 15 chr17 52206080 52206213 -43066438 + MER58B DNA MER1_type 174 320 -21 3 983 627 39 0 0 chr17 52206293 52206371 -43066280 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 3 983 481 234 33 75 chr17 52207231 52207351 -43065300 + PB1D10 SINE Alu 1 115 -2 3 983 284 273 10 0 chr17 52208683 52208782 -43063869 + CT-rich Low_complexity Low_complexity 2 101 0 3 983 1072 117 0 16 chr17 52208778 52208828 -43063823 + (TTC)n Simple_repeat Simple_repeat 3 51 0 3 983 1101 131 0 0 chr17 52208828 52209004 -43063647 + (TCC)n Simple_repeat Simple_repeat 3 178 0 3 983 1072 117 0 16 chr17 52209004 52209136 -43063515 + (TTC)n Simple_repeat Simple_repeat 1 131 0 3 983 610 218 13 0 chr17 52209162 52209318 -43063333 + CT-rich Low_complexity Low_complexity 2 159 0 3 983 351 0 0 0 chr17 52209570 52209609 -43063042 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 983 780 260 24 6 chr17 52209611 52209781 -43062870 - B3A SINE B2 -24 174 2 3 983 300 361 0 8 chr17 52210185 52210308 -43062343 + CT-rich Low_complexity Low_complexity 3 124 0 3 983 24 67 0 0 chr17 52212112 52212157 -43060494 + AT_rich Low_complexity Low_complexity 1 45 0 3 983 854 104 0 0 chr17 52214309 52214419 -43058232 + Lx2 LINE L1 5796 5905 -1092 3 983 3524 135 18 16 chr17 52214419 52214670 -43057981 + Lx LINE L1 6096 6342 -312 3 983 369 0 0 0 chr17 52214670 52214711 -43057940 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 983 3524 135 18 16 chr17 52214711 52215016 -43057635 + Lx LINE L1 6343 6653 -1 3 983 854 104 0 0 chr17 52215016 52215030 -43057621 + Lx2 LINE L1 5906 5919 -1078 3 983 322 314 10 0 chr17 52215238 52215340 -43057311 - MER5A1 DNA MER1_type 0 166 64 4 983 3694 34 0 0 chr17 52216569 52216978 -43055673 - L1Md_A LINE L1 0 6582 6174 4 983 2114 37 0 0 chr17 52216978 52217222 -43055429 + L1Md_T LINE L1 5952 6195 -387 4 983 755 246 10 45 chr17 52217553 52217753 -43054898 + B3A SINE B2 6 198 0 4 983 307 349 8 45 chr17 52219437 52219569 -43053082 + RSINE1 SINE B4 3 129 -36 4 983 390 21 0 0 chr17 52219622 52219669 -43052982 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 983 232 234 0 0 chr17 52220701 52220765 -43051886 + (CAGTT)n Simple_repeat Simple_repeat 4 67 0 4 983 1113 223 25 63 chr17 52220786 52221166 -43051485 + RMER6A LTR ERVK 395 720 0 4 983 405 0 0 0 chr17 52221415 52221460 -43051191 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 983 259 386 0 0 chr17 52221527 52221615 -43051036 + PB1 SINE Alu 31 118 -9 4 983 293 265 0 133 chr17 52223458 52223571 -43049080 + B1F SINE Alu 1 98 -51 4 983 240 244 124 108 chr17 52223571 52223585 -43049066 + ID_B1 SINE B4 82 210 -14 4 983 198 0 0 0 chr17 52223770 52223792 -43048859 + (T)n Simple_repeat Simple_repeat 1 22 0 4 983 253 319 0 70 chr17 52225808 52225936 -43046715 + MIR3 SINE MIR 84 202 -6 4 983 281 366 84 12 chr17 52226012 52226178 -43046473 - MER3 DNA MER1_type 0 209 32 4 983 302 297 0 0 chr17 52226569 52226633 -43046018 - B4A SINE B4 0 292 229 4 983 1714 198 130 46 chr17 52226705 52226784 -43045867 - RLTR16 LTR ERVK -12 493 404 4 983 405 0 0 0 chr17 52226784 52226829 -43045822 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 983 555 16 0 0 chr17 52226829 52226892 -43045759 + (GA)n Simple_repeat Simple_repeat 2 65 0 4 983 1714 198 130 46 chr17 52226892 52227266 -43045385 - RLTR16 LTR ERVK -102 403 2 4 983 1010 280 34 19 chr17 52227266 52227497 -43045154 - B4A SINE B4 -56 236 2 4 983 230 316 10 59 chr17 52227809 52227910 -43044741 + RMER17D LTR ERVK 659 754 -135 4 983 333 0 0 0 chr17 52228353 52228390 -43044261 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 983 195 42 0 0 chr17 52228465 52228489 -43044162 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 4 983 228 35 0 0 chr17 52228692 52228721 -43043930 + (TTTTTG)n Simple_repeat Simple_repeat 1 29 0 4 983 41920 7 1 2 chr17 52228731 52235730 -43036921 - L1Md_A LINE L1 0 6582 1 4 983 301 227 15 15 chr17 52238479 52238546 -43034105 - MTE2b LTR MaLR -3 356 290 4 983 296 306 44 18 chr17 52238605 52238718 -43033933 + MER20 DNA MER1_type 37 152 -67 4 983 561 312 29 0 chr17 52239012 52239150 -43033501 - MTE2b LTR MaLR -115 264 123 4 983 3713 91 6 11 chr17 52239237 52239714 -43032937 - MT2C_Mm LTR ERVL 0 475 1 4 983 260 316 0 12 chr17 52240093 52240173 -43032478 + L2a LINE L2 3343 3421 -5 4 983 303 265 28 38 chr17 52240449 52240555 -43032096 - MLT1D LTR MaLR 0 627 523 4 983 401 298 59 102 chr17 52240753 52241007 -43031644 - MLT1D LTR MaLR -230 275 33 4 983 206 81 27 0 chr17 52241015 52241052 -43031599 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 4 983 237 314 100 21 chr17 52241149 52241289 -43031362 + L2a LINE L2 3272 3422 -4 4 983 707 220 0 6 chr17 52243723 52243897 -43028754 + (TA)n Simple_repeat Simple_repeat 1 173 0 4 983 254 253 13 26 chr17 52243903 52243980 -43028671 + (CATATA)n Simple_repeat Simple_repeat 4 79 0 4 983 417 338 132 14 chr17 52244018 52244231 -43028420 - MLT2C1 LTR ERVL -145 252 15 4 983 1264 36 0 0 chr17 52244581 52244720 -43027931 - B1_Mm SINE Alu -8 139 1 4 983 325 269 11 21 chr17 52246126 52246221 -43026430 + CT-rich Low_complexity Low_complexity 4 97 0 4 983 192 40 0 0 chr17 52246248 52246273 -43026378 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 983 520 384 32 54 chr17 52246307 52246585 -43026066 - B4A SINE B4 -6 286 15 4 983 385 337 131 30 chr17 52247327 52248286 -43024365 + L2a LINE L2 2334 3425 -1 4 983 2334 130 16 0 chr17 52248296 52248618 -43024033 + ORR1A2 LTR MaLR 1 327 0 4 983 440 298 9 9 chr17 52249022 52249137 -43023514 + RSINE1 SINE B4 1 115 -50 4 983 348 88 0 0 chr17 52249985 52250042 -43022609 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 983 1352 306 111 32 chr17 52250553 52250626 -43022025 + L1MA6 LINE L1 4420 4505 -1638 4 983 450 36 0 0 chr17 52250626 52250682 -43021969 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 983 1352 297 102 23 chr17 52250682 52251909 -43020742 + L1MA6 LINE L1 4506 5825 -475 4 983 390 155 0 0 chr17 52251909 52251962 -43020689 + polypurine Low_complexity Low_complexity 1 53 0 4 983 1158 122 0 0 chr17 52251962 52252142 -43020509 + (GGA)n Simple_repeat Simple_repeat 1 180 0 4 983 390 155 0 0 chr17 52252142 52252159 -43020492 + polypurine Low_complexity Low_complexity 54 70 0 4 983 595 201 257 0 chr17 52252698 52252842 -43019809 - B3A SINE B2 -16 182 2 4 983 2480 201 61 4 chr17 52253127 52253507 -43019144 + RMER1B Other Other 541 935 -131 4 983 234 0 0 0 chr17 52253507 52253533 -43019118 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 4 983 2480 201 61 4 chr17 52253533 52253646 -43019005 + RMER1B Other Other 936 1061 -5 4 983 394 311 79 53 chr17 52253749 52253939 -43018712 - B3 SINE B2 -20 196 2 4 983 938 74 0 0 chr17 52254910 52255032 -43017619 - L1_Mus1 LINE L1 0 6567 6446 4 983 267 93 0 0 chr17 52255095 52255138 -43017513 + (A)n Simple_repeat Simple_repeat 1 43 0 4 983 225 0 0 0 chr17 52256185 52256210 -43016441 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 983 24958 148 18 44 chr17 52256216 52259479 -43013172 + L1_Mus4 LINE L1 403 3460 -2423 4 983 2845 52 0 0 chr17 52259479 52259808 -43012843 + L1_Mus1 LINE L1 6239 6567 0 4 983 24958 138 18 42 chr17 52259808 52262877 -43009774 + L1_Mus4 LINE L1 3461 6561 -75 4 983 259 354 114 13 chr17 52263456 52263605 -43009046 - LTR33 LTR ERVL -338 177 14 4 983 690 299 0 0 chr17 52263759 52263903 -43008748 - ID_B1 SINE B4 -2 222 79 4 983 279 295 90 11 chr17 52264131 52264220 -43008431 + B3 SINE B2 2 97 -119 4 983 563 360 75 14 chr17 52264291 52264570 -43008081 + LTR16C LTR ERVL 194 489 0 4 983 1255 281 67 14 chr17 52265716 52266087 -43006564 - MTD LTR MaLR -8 411 21 4 983 1997 117 11 102 chr17 52266633 52266994 -43005657 - ORR1A4 LTR MaLR -1 328 1 4 983 3251 129 68 196 chr17 52266994 52267859 -43004792 - ORR1A4-int LTR MaLR 0 1963 1210 4 983 503 98 0 58 chr17 52267840 52267927 -43004724 - ORR1A4 LTR MaLR -245 84 3 4 983 587 266 87 48 chr17 52268005 52268234 -43004417 + MTE2a LTR MaLR 6 243 -136 4 983 423 152 0 0 chr17 52268234 52268313 -43004338 + (TG)n Simple_repeat Simple_repeat 1 79 0 4 983 791 274 0 0 chr17 52268320 52268495 -43004156 + MTE2a LTR MaLR 205 379 0 4 983 227 281 94 0 chr17 52268495 52268550 -43004101 - B1F1 SINE Alu -63 86 26 4 983 23 68 0 0 chr17 52268725 52268769 -43003882 + AT_rich Low_complexity Low_complexity 1 44 0 4 983 23 0 0 0 chr17 52268913 52268936 -43003715 + AT_rich Low_complexity Low_complexity 1 23 0 4 983 386 294 19 10 chr17 52268955 52269058 -43003593 - PB1D7 SINE Alu 0 120 17 4 983 300 311 94 28 chr17 52268972 52269078 -43003573 - ID_B1 SINE B4 -44 180 68 4 983 396 0 0 0 chr17 52269364 52269408 -43003243 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 983 426 223 41 41 chr17 52269409 52269507 -43003144 - B1F SINE Alu -51 98 1 4 983 287 265 0 42 chr17 52269444 52269515 -43003136 - B4A SINE B4 -147 145 78 4 983 189 0 0 0 chr17 52269981 52270002 -43002649 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 4 983 346 244 204 15 chr17 52270057 52270194 -43002457 - Tigger7 DNA MER2_type -2 2489 2327 4 983 296 328 25 0 chr17 52270215 52270337 -43002314 - Tigger7 DNA MER2_type -2037 454 330 4 983 606 335 24 5 chr17 52270402 52270615 -43002036 - Tigger7 DNA MER2_type -2266 225 9 4 983 21 0 0 0 chr17 52271204 52271225 -43001426 + AT_rich Low_complexity Low_complexity 1 21 0 4 983 714 67 0 0 chr17 52271268 52271373 -43001278 + (GA)n Simple_repeat Simple_repeat 2 106 0 4 983 415 339 16 8 chr17 52271374 52271499 -43001152 - RSINE1 SINE B4 -24 141 16 4 983 335 301 104 25 chr17 52271944 52272145 -43000506 - HAL1 LINE L1 -341 2166 1950 4 983 651 48 0 0 chr17 52272216 52272299 -43000352 + (CA)n Simple_repeat Simple_repeat 2 84 0 4 983 223 226 0 19 chr17 52272881 52272935 -42999716 + (TAA)n Simple_repeat Simple_repeat 3 55 0 4 983 203 340 91 20 chr17 52273911 52274010 -42998641 - L2c LINE L2 -3 3384 3279 4 983 426 239 0 42 chr17 52274686 52274782 -42997869 - PB1D10 SINE Alu -1 116 25 4 983 555 317 48 0 chr17 52275000 52275145 -42997506 + RSINE1 SINE B4 2 153 -12 4 983 1798 266 105 45 chr17 52275394 52276154 -42996497 + RMER13A LTR ERVK 1 860 0 4 983 277 295 2 7 chr17 52277105 52277214 -42995437 + L1MC4 LINE L1 7927 8024 -18 4 983 969 67 0 0 chr17 52277692 52277827 -42994824 + L1Md_F2 LINE L1 6440 6574 -8 4 983 1286 177 5 5 chr17 52278093 52278314 -42994337 + URR1A DNA MER1_type 6 226 0 4 983 228 310 92 25 chr17 52278807 52278926 -42993725 + MLT1N2 LTR MaLR 412 538 -24 4 983 248 342 38 0 chr17 52279013 52279092 -42993559 + MER96 DNA hAT 92 173 -2 4 983 244 357 67 37 chr17 52279931 52280065 -42992586 + L2 LINE L2 2666 2803 -616 4 983 608 355 52 33 chr17 52280804 52281075 -42991576 + MLT1I LTR MaLR 37 312 -99 4 983 230 248 0 37 chr17 52281094 52281228 -42991423 + GA-rich Low_complexity Low_complexity 2 130 0 4 983 758 240 26 32 chr17 52281260 52281415 -42991236 + B3A SINE B2 1 154 -44 4 983 513 303 74 23 chr17 52282909 52283125 -42989526 - MLT1A0 LTR MaLR -120 245 19 4 983 588 193 43 31 chr17 52283305 52283468 -42989183 - MTC LTR MaLR -2 419 187 4 983 385 310 97 9 chr17 52283420 52283534 -42989117 + RSINE1 SINE B4 34 157 -8 4 983 261 0 0 0 chr17 52283537 52283566 -42989085 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 983 283 280 38 23 chr17 52283633 52283776 -42988875 + MER104 DNA Tc2 30 178 -3 4 983 563 333 23 8 chr17 52284685 52284942 -42987709 + Lx8 LINE L1 7057 7317 -156 4 983 911 241 56 84 chr17 52285200 52285365 -42987286 - MTE2b LTR MaLR -11 368 199 5 983 1108 90 0 0 chr17 52285365 52285509 -42987142 + B1_Mus2 SINE Alu 2 145 -2 5 983 911 241 56 84 chr17 52285509 52285628 -42987023 - MTE2b LTR MaLR -181 198 92 5 983 829 81 177 0 chr17 52286036 52286160 -42986491 + B1_Mus2 SINE Alu 1 146 -1 5 983 1565 260 42 60 chr17 52286668 52286717 -42985934 - RLTR20B3 LTR ERVK -56 521 478 5 983 3463 20 5 0 chr17 52286717 52287111 -42985540 + MTA_Mm LTR MaLR 1 396 0 5 983 1565 260 42 60 chr17 52287111 52287581 -42985070 - RLTR20B3 LTR ERVK -100 477 11 5 983 337 351 41 35 chr17 52289286 52289457 -42983194 - MIR SINE MIR -3 259 88 5 983 1140 264 75 18 chr17 52289576 52289930 -42982721 + MTD LTR MaLR 28 419 0 5 983 537 16 0 0 chr17 52290163 52290225 -42982426 + (TC)n Simple_repeat Simple_repeat 2 63 0 5 983 210 71 0 0 chr17 52291387 52291415 -42981236 + (CAGAA)n Simple_repeat Simple_repeat 4 31 0 5 983 504 310 73 32 chr17 52291523 52291743 -42980908 - LTR73 LTR ERV1 -230 342 114 5 983 231 36 0 0 chr17 52292602 52292630 -42980021 + (TTTTA)n Simple_repeat Simple_repeat 5 32 0 5 983 930 257 5 0 chr17 52292630 52292817 -42979834 - B3 SINE B2 -16 200 13 5 983 3803 54 2 0 chr17 52293458 52293924 -42978727 + L1_Mus2 LINE L1 6100 6566 0 5 983 237 376 48 34 chr17 52293924 52294070 -42978581 + MER58A DNA MER1_type 62 209 -15 5 983 28 61 0 0 chr17 52294785 52294834 -42977817 + AT_rich Low_complexity Low_complexity 1 49 0 5 983 588 243 52 0 chr17 52294949 52295085 -42977566 - B3A SINE B2 -47 151 9 5 983 716 319 95 38 chr17 52295456 52295687 -42976964 - MLT1H2 LTR MaLR -73 416 161 5 983 3010 20 3 0 chr17 52295687 52296032 -42976619 - ORR1A0 LTR MaLR 0 346 1 5 983 716 319 95 38 chr17 52296032 52296191 -42976460 - MLT1H2 LTR MaLR -329 160 4 5 983 24 0 0 0 chr17 52296706 52296730 -42975921 + AT_rich Low_complexity Low_complexity 1 24 0 5 983 233 309 48 0 chr17 52297551 52297635 -42975016 - MIR SINE MIR -55 153 66 5 984 22 35 0 0 chr17 52300848 52300877 -42971774 + AT_rich Low_complexity Low_complexity 1 29 0 5 984 315 310 119 112 chr17 52300878 52301038 -42971613 + MER20 DNA MER1_type 4 164 -55 5 984 384 178 0 0 chr17 52301330 52301403 -42971248 + (TA)n Simple_repeat Simple_repeat 1 73 0 5 984 245 53 53 0 chr17 52302770 52302808 -42969843 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 5 984 287 272 135 35 chr17 52303134 52303275 -42969376 + RSINE1 SINE B4 3 157 -8 5 984 693 295 52 26 chr17 52303749 52303979 -42968672 + B4A SINE B4 28 263 -29 5 984 432 0 0 0 chr17 52304045 52304093 -42968558 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 984 211 122 116 47 chr17 52305127 52305170 -42967481 - PB1 SINE Alu -8 119 74 5 984 243 129 65 0 chr17 52305712 52305774 -42966877 + T-rich Low_complexity Low_complexity 4 69 0 5 984 513 0 0 0 chr17 52306088 52306145 -42966506 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 984 475 283 84 28 chr17 52306406 52306444 -42966207 - RSINE1 SINE B4 -2 163 114 5 984 468 0 0 0 chr17 52306444 52306496 -42966155 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 984 475 283 84 28 chr17 52306496 52306599 -42966052 - RSINE1 SINE B4 -52 113 14 5 984 288 148 20 111 chr17 52309305 52309328 -42963323 + RMER30 DNA MER1_type 84 102 -100 5 984 3909 48 0 4 chr17 52309328 52309812 -42962839 + L1Md_F2 LINE L1 6100 6581 -1 5 984 288 148 20 111 chr17 52309812 52309887 -42962764 + RMER30 DNA MER1_type 103 173 -29 5 984 204 67 0 0 chr17 52310091 52310121 -42962530 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 5 984 239 246 139 33 chr17 52310135 52310257 -42962394 - MIRb SINE MIR -8 260 126 5 984 387 60 0 0 chr17 52311458 52311508 -42961143 + (TC)n Simple_repeat Simple_repeat 2 51 0 5 984 348 24 0 0 chr17 52311508 52311549 -42961102 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 984 420 67 0 0 chr17 52311563 52311623 -42961028 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 984 1775 48 0 4 chr17 52311757 52311985 -42960666 + L1Md_A LINE L1 6356 6582 0 5 984 4673 41 0 0 chr17 52312013 52312570 -42960081 + L1Md_T LINE L1 6026 6582 0 5 984 447 19 0 0 chr17 52314107 52314159 -42958492 + (CATA)n Simple_repeat Simple_repeat 2 53 0 5 984 454 351 34 21 chr17 52314444 52314680 -42957971 + Tigger13a DNA MER2_type 128 366 -405 5 984 252 274 54 93 chr17 52315145 52315274 -42957377 + MIR SINE MIR 22 145 -63 5 984 306 0 0 0 chr17 52316216 52316250 -42956401 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 984 28 0 0 0 chr17 52317904 52317932 -42954719 + AT_rich Low_complexity Low_complexity 1 28 0 5 984 297 319 41 41 chr17 52317935 52318082 -42954569 + MER58B DNA MER1_type 194 340 -1 5 984 658 274 48 11 chr17 52318468 52318656 -42953995 - RMER30 DNA MER1_type -1 201 7 5 984 2997 286 76 5 chr17 52319731 52320630 -42952021 + Lx8 LINE L1 6398 7350 -123 5 984 522 70 0 0 chr17 52320630 52320701 -42951950 + (CA)n Simple_repeat Simple_repeat 2 72 0 5 984 2997 286 76 5 chr17 52320701 52320797 -42951854 + Lx8 LINE L1 7351 7464 -9 5 984 590 113 0 9 chr17 52322919 52323026 -42949625 + (GA)n Simple_repeat Simple_repeat 2 107 0 5 984 257 381 156 4 chr17 52323106 52323356 -42949295 - L2 LINE L2 -564 2855 2568 5 984 24 53 0 0 chr17 52323416 52323454 -42949197 + AT_rich Low_complexity Low_complexity 1 38 0 5 984 1371 304 15 19 chr17 52323509 52324039 -42948612 - Lx8 LINE L1 -92 7381 6854 5 984 300 315 59 59 chr17 52324386 52324504 -42948147 + PB1D10 SINE Alu 1 118 -31 5 984 819 324 205 26 chr17 52324507 52324637 -42948014 - L2 LINE L2 -1358 2061 1927 5 984 1154 62 0 7 chr17 52324637 52324775 -42947876 + B1_Mus2 SINE Alu 2 139 -8 5 984 471 35 0 0 chr17 52324775 52324832 -42947819 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 984 819 324 205 26 chr17 52324840 52325128 -42947523 - L2 LINE L2 -1493 1926 1564 5 984 666 55 0 0 chr17 52325128 52325219 -42947432 + (TG)n Simple_repeat Simple_repeat 1 91 0 5 984 363 23 0 0 chr17 52325219 52325262 -42947389 + (GA)n Simple_repeat Simple_repeat 1 44 0 5 984 819 324 205 26 chr17 52325262 52325957 -42946694 - L2 LINE L2 -1856 1563 747 5 984 339 299 34 0 chr17 52326357 52326474 -42946177 - L1MD2 LINE L1 -339 6020 5900 5 984 1519 220 113 0 chr17 52326846 52327201 -42945450 - MTD LTR MaLR -16 403 9 5 984 23 33 0 0 chr17 52327211 52327241 -42945410 + AT_rich Low_complexity Low_complexity 1 30 0 5 984 662 24 0 12 chr17 52327665 52327750 -42944901 + (CA)n Simple_repeat Simple_repeat 2 85 0 5 984 328 330 141 20 chr17 52327769 52328066 -42944585 + L1ME3A LINE L1 5841 6173 0 5 984 533 267 165 75 chr17 52328853 52329035 -42943616 - B3 SINE B2 -7 209 1 5 984 207 176 0 0 chr17 52329904 52329938 -42942713 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 984 247 323 100 10 chr17 52330268 52330368 -42942283 + MIRb SINE MIR 86 194 -74 5 984 432 0 0 0 chr17 52331210 52331258 -42941393 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 984 646 301 137 69 chr17 52332100 52332450 -42940201 - MTE2b LTR MaLR -5 374 1 5 984 324 0 0 0 chr17 52332976 52333012 -42939639 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 5 984 806 319 114 12 chr17 52333578 52333902 -42938749 - MLT1A0 LTR MaLR 0 365 9 5 984 180 211 26 0 chr17 52334320 52334358 -42938293 - L2c LINE L2 -223 3164 3126 5 984 750 23 0 0 chr17 52335716 52335804 -42936847 + (TTC)n Simple_repeat Simple_repeat 3 90 0 5 984 213 318 85 31 chr17 52336726 52336856 -42935795 - MER5A DNA MER1_type -37 152 16 5 984 6843 83 57 1 chr17 52337613 52338792 -42933859 - L1_Mus4 LINE L1 -1 6635 5395 5 984 1495 244 75 23 chr17 52341072 52341470 -42931181 + MTD LTR MaLR 1 419 0 5 984 420 261 134 10 chr17 52341931 52342132 -42930519 + MLT2C1 LTR ERVL 3 228 -169 5 984 1109 88 0 0 chr17 52342132 52342279 -42930372 + B1_Mus2 SINE Alu 1 147 0 5 984 386 319 174 20 chr17 52342279 52342371 -42930280 + MLT2C1 LTR ERVL 233 340 -124 5 984 411 73 0 0 chr17 52342417 52342472 -42930179 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 5 984 216 172 33 49 chr17 52342484 52342545 -42930106 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 5 984 1221 229 71 62 chr17 52342645 52342985 -42929666 - MTE2a LTR MaLR -36 343 1 5 984 4065 114 23 33 chr17 52344752 52345396 -42927255 - Lx LINE L1 -2 6652 6015 5 984 753 41 0 0 chr17 52346003 52346100 -42926551 + (TC)n Simple_repeat Simple_repeat 1 97 0 5 984 243 0 0 0 chr17 52346100 52346126 -42926525 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 984 212 324 77 68 chr17 52346435 52346636 -42926015 + MIR SINE MIR 50 260 -8 5 984 699 132 0 0 chr17 52347004 52347118 -42925533 + (TTCC)n Simple_repeat Simple_repeat 3 116 0 5 984 2034 164 3 6 chr17 52347389 52347720 -42924931 - Lx4A LINE L1 -1 7057 6728 5 984 471 48 0 0 chr17 52347790 52347852 -42924799 + (CA)n Simple_repeat Simple_repeat 2 63 0 5 984 185 320 157 44 chr17 52347859 52348088 -42924563 - L2c LINE L2 -150 3237 2983 5 984 364 332 9 159 chr17 52348144 52348377 -42924274 + MER63A DNA AcHobo 12 209 -1 5 984 232 303 39 129 chr17 52349399 52349577 -42923074 + MER5A DNA MER1_type 28 189 0 5 984 247 356 14 0 chr17 52349648 52349721 -42922930 - ID4_ SINE ID -9 74 1 5 984 430 326 45 14 chr17 52349911 52350085 -42922566 + ID_B1 SINE B4 65 240 -52 5 984 1263 266 43 19 chr17 52350106 52350524 -42922127 + Lx8 LINE L1 7041 7468 -5 5 984 27 29 0 0 chr17 52350744 52350778 -42921873 + AT_rich Low_complexity Low_complexity 1 34 0 5 984 363 269 97 0 chr17 52351079 52351172 -42921479 + PB1D10 SINE Alu 1 102 -15 5 984 873 108 0 0 chr17 52351175 52351333 -42921318 + (GA)n Simple_repeat Simple_repeat 1 158 0 5 984 251 287 21 94 chr17 52351952 52352048 -42920603 + MLT1J LTR MaLR 122 210 -302 5 984 21 0 0 0 chr17 52352847 52352868 -42919783 + AT_rich Low_complexity Low_complexity 1 21 0 5 984 211 93 36 36 chr17 52354003 52354059 -42918592 + T-rich Low_complexity Low_complexity 2 57 0 5 984 207 122 49 0 chr17 52354448 52354489 -42918162 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 984 2472 66 0 0 chr17 52355047 52355397 -42917254 + L1Md_A LINE L1 6258 6582 0 6 984 858 259 78 112 chr17 52355501 52355875 -42916776 - MTE2a LTR MaLR -16 363 3 6 984 265 294 162 24 chr17 52356338 52356505 -42916146 + MLT1D LTR MaLR 21 210 -295 6 984 314 331 25 38 chr17 52356537 52356692 -42915959 + MLT1D LTR MaLR 308 460 -45 6 984 487 304 113 28 chr17 52356692 52357010 -42915641 - MT2A LTR ERVL 0 533 189 6 984 730 125 125 0 chr17 52357057 52357185 -42915466 + URR1A DNA MER1_type 83 226 0 6 984 647 283 14 81 chr17 52357525 52357604 -42915047 - B3 SINE B2 -7 209 147 6 984 354 45 0 0 chr17 52357604 52357648 -42915003 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 984 647 283 14 81 chr17 52357648 52357791 -42914860 - B3 SINE B2 -70 146 2 6 984 280 277 113 47 chr17 52357937 52358043 -42914608 - MER33 DNA MER1_type -197 127 15 6 984 480 62 0 0 chr17 52358578 52358642 -42914009 + (TATG)n Simple_repeat Simple_repeat 4 67 0 6 984 450 346 30 0 chr17 52358642 52358775 -42913876 - RSINE1 SINE B4 -21 144 8 6 984 342 254 273 0 chr17 52359804 52359914 -42912737 - RSINE1 SINE B4 -24 141 2 6 984 306 308 92 89 chr17 52360216 52360487 -42912164 - MLT1H1 LTR MaLR -9 480 209 6 984 313 272 170 9 chr17 52360679 52360812 -42911839 - MLT1H1 LTR MaLR -346 203 10 6 984 332 395 0 0 chr17 52362294 52362305 -42910346 - PB1D10 SINE Alu -8 109 49 6 984 334 337 0 0 chr17 52362305 52362397 -42910254 - ID_B1 SINE B4 -45 179 88 6 984 477 254 70 0 chr17 52362923 52363037 -42909614 - B1_Mur1 SINE Alu -26 123 2 6 984 378 0 0 0 chr17 52363075 52363117 -42909534 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 984 180 0 0 0 chr17 52363117 52363136 -42909515 + (GA)n Simple_repeat Simple_repeat 1 20 0 6 984 1397 240 219 6 chr17 52363682 52364156 -42908495 + RMER15 LTR ERVL 1 575 0 6 984 347 230 0 74 chr17 52366359 52366467 -42906184 - MTE2a LTR MaLR -4 375 276 6 984 5089 52 0 8 chr17 52366475 52367117 -42905534 - L1Md_F2 LINE L1 -2 6580 5944 6 984 402 340 49 93 chr17 52367141 52367476 -42905175 - MTE2a LTR MaLR -91 330 19 6 984 305 244 62 72 chr17 52368883 52368980 -42903671 - RMER15 LTR ERVL -1 574 479 6 984 180 0 0 0 chr17 52368992 52369012 -42903639 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 984 942 57 40 0 chr17 52369012 52369136 -42903515 - B1_Mus1 SINE Alu -3 145 17 6 984 400 237 47 88 chr17 52369136 52369284 -42903367 - RMER15 LTR ERVL -159 416 275 6 984 1023 16 0 0 chr17 52369323 52369444 -42903207 + (TCTCC)n Simple_repeat Simple_repeat 4 124 0 6 984 970 166 33 6 chr17 52369791 52369973 -42902678 - B2_Mm2 SINE B2 -8 187 1 6 984 230 367 27 18 chr17 52370008 52370119 -42902532 - Lx8 LINE L1 -145 7328 7217 6 984 330 277 143 69 chr17 52370566 52370783 -42901868 - L2a LINE L2 0 3426 3194 6 984 195 42 0 0 chr17 52371263 52371287 -42901364 + (CTA)n Simple_repeat Simple_repeat 3 26 0 6 984 292 352 115 0 chr17 52372066 52372188 -42900463 + MER5A DNA MER1_type 45 180 -9 6 984 495 0 0 0 chr17 52372981 52373036 -42899615 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 984 545 0 15 0 chr17 52373036 52373100 -42899551 + (GA)n Simple_repeat Simple_repeat 2 67 0 6 984 226 263 0 50 chr17 52373132 52373192 -42899459 + MamGypLTR1d LTR Gypsy 755 811 -2 6 984 1078 110 0 0 chr17 52373197 52373343 -42899308 + B1_Mus1 SINE Alu 2 147 -1 6 984 360 287 13 40 chr17 52373429 52373578 -42899073 + Kanga2_a DNA Tc2 118 262 -626 6 984 267 419 66 12 chr17 52373910 52374166 -42898485 - LTR33 LTR ERVL -225 290 21 6 984 1393 268 54 7 chr17 52374339 52374786 -42897865 - Lx8 LINE L1 -17 7456 6989 6 984 961 251 76 35 chr17 52374831 52375145 -42897506 - Lx8 LINE L1 -566 6907 6581 6 984 228 418 8 16 chr17 52375694 52375818 -42896833 + Arthur1A DNA Tip100 54 176 -1 6 984 280 408 36 25 chr17 52377029 52377225 -42895426 + MLT1H LTR MaLR 72 269 -280 6 984 573 28 0 0 chr17 52377244 52377315 -42895336 + (TC)n Simple_repeat Simple_repeat 1 71 0 6 984 414 0 0 0 chr17 52377315 52377360 -42895291 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 984 16752 151 29 12 chr17 52378205 52381311 -42891340 - Lx LINE L1 0 6654 3492 6 984 468 0 0 0 chr17 52381311 52381363 -42891288 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 6 984 16752 170 18 8 chr17 52381363 52382403 -42890248 - Lx LINE L1 -2395 3491 2456 6 984 776 192 0 12 chr17 52382406 52382575 -42890076 + (CATATA)n Simple_repeat Simple_repeat 4 170 0 6 984 484 321 83 26 chr17 52382575 52382767 -42889884 - B4 SINE B4 -2 290 88 6 984 872 230 207 0 chr17 52382811 52383120 -42889531 + Lx9 LINE L1 7270 7642 -2 6 984 2976 138 100 82 chr17 52383125 52383756 -42888895 - RLTR26 LTR ERVK 0 642 1 6 984 258 116 125 23 chr17 52383756 52383844 -42888807 + (CATATA)n Simple_repeat Simple_repeat 2 98 0 6 984 323 204 90 20 chr17 52383903 52384003 -42888648 - Lx9 LINE L1 -486 7158 7052 6 984 527 150 60 8 chr17 52384317 52384451 -42888200 - Lx3_Mus LINE L1 -5 7004 6864 6 984 5585 123 74 4 chr17 52384462 52385366 -42887285 - Lx3C LINE L1 -2 6974 6008 6 984 437 275 46 0 chr17 52385405 52385536 -42887115 - Lx8 LINE L1 -257 7216 7080 6 984 650 225 29 0 chr17 52385813 52385951 -42886700 - RMER15 LTR ERVL 0 575 434 6 984 1942 207 45 3 chr17 52385953 52386311 -42886340 - RLTR14 LTR ERV1 -2 380 8 6 984 1780 207 14 88 chr17 52386318 52386762 -42885889 - RMER15 LTR ERVL -138 437 27 6 984 275 274 39 0 chr17 52387103 52387205 -42885446 - L1M4b LINE L1 -4272 3062 2957 6 984 308 254 42 34 chr17 52387230 52387348 -42885303 - L1M4b LINE L1 -4455 2879 2761 6 984 186 143 0 0 chr17 52387506 52387541 -42885110 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 984 309 317 129 0 chr17 52387554 52387655 -42884996 - RSINE1 SINE B4 -8 157 44 6 984 414 309 32 16 chr17 52387653 52387778 -42884873 - B1F SINE Alu -5 144 18 6 984 451 337 93 60 chr17 52388606 52389070 -42883581 - L1M4b LINE L1 -4900 2202 1724 6 984 282 264 11 0 chr17 52389096 52389183 -42883468 - L1M4b LINE L1 -5777 1557 1470 6 984 291 175 0 0 chr17 52389207 52389264 -42883387 + (TATG)n Simple_repeat Simple_repeat 4 60 0 6 984 687 346 68 55 chr17 52389285 52389845 -42882806 - L1M4b LINE L1 -5914 1420 854 6 984 534 301 40 11 chr17 52389849 52390024 -42882627 - B3A SINE B2 -18 180 1 6 984 180 0 0 0 chr17 52391935 52391955 -42880696 + (TTTG)n Simple_repeat Simple_repeat 4 23 0 6 984 782 289 26 7 chr17 52391959 52392231 -42880420 - L1_Rod LINE L1 -1658 4189 3913 6 984 2051 257 125 25 chr17 52392219 52392574 -42880077 - RMER1C Other Other -1 1341 964 6 984 387 0 0 0 chr17 52392574 52392617 -42880034 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 984 495 0 0 0 chr17 52392617 52392671 -42879980 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 984 2051 257 125 25 chr17 52392671 52393084 -42879567 - RMER1C Other Other -379 963 496 6 984 13396 90 12 4 chr17 52393196 52395885 -42876766 + L1VL4 LINE L1 198 2913 -646 6 984 30854 79 11 4 chr17 52395895 52401029 -42871622 + L1Md_F2 LINE L1 415 5585 -298 6 984 7205 68 31 2 chr17 52401030 52401986 -42870665 + L1Md_F2 LINE L1 5587 6570 -12 6 984 2464 191 42 0 chr17 52401997 52402547 -42870104 + L1_Mur2 LINE L1 3266 3838 -2039 6 984 252 0 0 0 chr17 52402882 52402910 -42869741 + (T)n Simple_repeat Simple_repeat 1 28 0 6 984 454 367 40 31 chr17 52403563 52403788 -42868863 + LTR16E1 LTR ERVL 195 421 -117 6 984 256 333 0 0 chr17 52404185 52404254 -42868397 + LTR16E1 LTR ERVL 467 535 -3 6 984 476 231 124 87 chr17 52404279 52404497 -42868154 - LTR37A LTR ERV1 0 426 201 6 984 183 42 0 0 chr17 52404997 52405021 -42867630 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 6 984 2773 37 31 6 chr17 52405049 52405400 -42867251 - L1Md_F2 LINE L1 0 6582 6223 6 984 1431 85 0 0 chr17 52405400 52405601 -42867050 + L1Md_F2 LINE L1 6018 6218 -364 6 984 1362 124 12 33 chr17 52406491 52406732 -42865919 + Lx2 LINE L1 6758 6993 -4 6 984 348 230 10 29 chr17 52406733 52406836 -42865815 + RMER1C Other Other 1033 1133 -209 6 984 525 146 33 7 chr17 52407399 52407551 -42865100 + (TG)n Simple_repeat Simple_repeat 1 156 0 6 984 517 314 88 51 chr17 52408166 52408529 -42864122 - ORR1E LTR MaLR 0 370 1 6 984 380 317 60 11 chr17 52411371 52411553 -42861098 - MER58A DNA MER1_type -33 191 1 6 984 1085 262 72 42 chr17 52412165 52412391 -42860260 + L1MA4 LINE L1 5267 5494 -806 6 984 495 0 0 0 chr17 52412391 52412446 -42860205 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 984 1085 262 72 42 chr17 52412446 52412861 -42859790 + L1MA4 LINE L1 5495 5926 -374 6 984 262 324 14 0 chr17 52413315 52413386 -42859265 - B3 SINE B2 -136 80 9 6 984 262 24 47 23 chr17 52414292 52414335 -42858316 + (TTTTC)n Simple_repeat Simple_repeat 2 45 0 6 984 515 326 54 37 chr17 52414478 52414774 -42857877 - LTR89 LTR ERVL? -404 475 175 6 984 521 327 126 25 chr17 52415093 52415457 -42857194 + Tigger7 DNA MER2_type 9 409 -2082 6 984 342 0 0 0 chr17 52415457 52415495 -42857156 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 984 360 0 0 0 chr17 52415495 52415534 -42857117 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 984 476 282 51 79 chr17 52415534 52415733 -42856918 + Tigger7 DNA MER2_type 2272 2466 -25 6 984 2893 38 5 44 chr17 52416313 52416696 -42855955 + L1Md_F2 LINE L1 6214 6581 -1 6 984 285 320 0 39 chr17 52417008 52417112 -42855539 - RMER15 LTR ERVL -58 517 418 6 984 390 306 100 122 chr17 52417336 52417615 -42855036 - ORR1E LTR MaLR 0 359 87 6 984 22 0 0 0 chr17 52417725 52417747 -42854904 + AT_rich Low_complexity Low_complexity 1 22 0 6 984 22 0 0 0 chr17 52418231 52418253 -42854398 + AT_rich Low_complexity Low_complexity 1 22 0 6 984 320 241 0 0 chr17 52418479 52418533 -42854118 + RSINE1 SINE B4 3 56 -109 6 984 1346 214 128 108 chr17 52418818 52419456 -42853195 + Lx7 LINE L1 7025 7675 -21 6 984 219 340 18 9 chr17 52419588 52419698 -42852953 + (TG)n Simple_repeat Simple_repeat 1 111 0 6 984 202 328 15 15 chr17 52419860 52419928 -42852723 - MIRb SINE MIR -164 104 37 6 984 342 252 83 46 chr17 52420128 52420236 -42852415 - MER3 DNA MER1_type -88 121 10 6 984 228 390 61 30 chr17 52422032 52422196 -42850455 - MIR3 SINE MIR -17 191 23 6 984 321 262 139 23 chr17 52422431 52422560 -42850091 + B3 SINE B2 67 210 -6 6 984 345 221 28 62 chr17 52422929 52423074 -42849577 - L1M5 LINE L1 -2180 3966 3827 6 984 639 0 0 0 chr17 52423296 52423367 -42849284 + (TTCC)n Simple_repeat Simple_repeat 2 72 0 6 984 1124 97 0 0 chr17 52423387 52423532 -42849119 - B1_Mus1 SINE Alu -1 147 3 6 984 190 146 41 20 chr17 52423533 52423582 -42849069 + CT-rich Low_complexity Low_complexity 2 51 0 7 984 273 338 14 0 chr17 52423584 52423655 -42848996 - PB1D10 SINE Alu -45 72 1 7 984 213 234 0 0 chr17 52423738 52423802 -42848849 + (TATATG)n Simple_repeat Simple_repeat 4 67 0 7 984 263 229 0 0 chr17 52424235 52424283 -42848368 - ID SINE ID -146 78 31 7 984 335 407 47 31 chr17 52424859 52425115 -42847536 - LTR16A LTR ERVL -182 269 10 7 984 369 0 0 0 chr17 52426124 52426165 -42846486 + (TA)n Simple_repeat Simple_repeat 1 41 0 7 984 537 302 69 71 chr17 52426703 52427195 -42845456 + Lx9 LINE L1 7127 7617 -27 7 15 16312 167 12 16 chr17 52428282 52432105 -42840546 + L1VL4 LINE L1 741 4548 -1338 7 985 4785 131 4 97 chr17 52432105 52433010 -42839641 + Lx2B LINE L1 6177 6997 -3 7 985 2991 177 90 23 chr17 52434009 52434710 -42837941 - Lx4B LINE L1 -4 7054 6307 7 985 219 36 0 0 chr17 52434737 52434765 -42837886 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 7 985 27 49 0 0 chr17 52435024 52435065 -42837586 + AT_rich Low_complexity Low_complexity 1 41 0 7 985 266 343 33 31 chr17 52435542 52435765 -42836886 - B4 SINE B4 -2 290 57 7 985 461 302 23 30 chr17 52435838 52435971 -42836680 - RSINE1 SINE B4 -31 134 3 7 985 1629 257 25 10 chr17 52436002 52436410 -42836241 - MTD LTR MaLR -5 414 1 7 985 3083 232 87 75 chr17 52437072 52437202 -42835449 - RMER1A Other Other -1 1029 894 7 985 207 69 0 0 chr17 52437202 52437231 -42835420 + (CCA)n Simple_repeat Simple_repeat 1 29 0 7 985 3083 232 87 75 chr17 52437231 52437624 -42835027 - RMER1A Other Other -137 893 470 7 985 324 0 0 0 chr17 52437624 52437660 -42834991 + (TC)n Simple_repeat Simple_repeat 2 37 0 7 985 5726 31 10 3 chr17 52437660 52438348 -42834303 - L1Md_F2 LINE L1 -16 6566 5874 7 985 3083 255 74 76 chr17 52438348 52439274 -42833377 - RMER1A Other Other -470 596 3 7 985 465 265 149 51 chr17 52439693 52439888 -42832763 + B3A SINE B2 1 214 -2 7 985 351 324 66 22 chr17 52440016 52440243 -42832408 - L1M5 LINE L1 -1382 4764 4528 7 985 29 60 0 0 chr17 52440960 52441010 -42831641 + AT_rich Low_complexity Low_complexity 1 50 0 7 985 292 250 0 35 chr17 52441021 52441079 -42831572 - RSINE1 SINE B4 -109 56 1 7 985 262 276 42 17 chr17 52441503 52441621 -42831030 + L1MC4 LINE L1 6929 7049 -993 7 985 207 0 0 0 chr17 52443367 52443390 -42829261 + (T)n Simple_repeat Simple_repeat 1 23 0 7 985 642 284 0 0 chr17 52446700 52446848 -42825803 - RSINE1 SINE B4 -15 150 3 7 985 1629 198 16 0 chr17 52449053 52449372 -42823279 + Lx9 LINE L1 6935 7258 -386 7 985 421 227 26 26 chr17 52449425 52449538 -42823113 + Lx9 LINE L1 7353 7465 -179 7 985 486 0 0 0 chr17 52449545 52449599 -42823052 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 7 985 360 285 43 28 chr17 52449865 52450006 -42822645 + MER3 DNA MER1_type 9 151 -58 7 985 560 248 40 0 chr17 52450008 52450133 -42822518 - ID_B1 SINE B4 -5 219 90 7 985 248 193 133 78 chr17 52450119 52450209 -42822442 + MER3 DNA MER1_type 109 203 -6 7 985 274 324 20 27 chr17 52450133 52450151 -42822500 + YREP_Mm Unknown Unknown 182 323 -1489 7 985 23 33 0 0 chr17 52450539 52450569 -42822082 + AT_rich Low_complexity Low_complexity 1 30 0 7 985 229 376 18 9 chr17 52450980 52451090 -42821561 + MLT1B LTR MaLR 11 121 -244 7 985 313 344 50 31 chr17 52451205 52451364 -42821287 + MLT1B LTR MaLR 223 384 -6 7 985 29 0 0 0 chr17 52451955 52451984 -42820667 + AT_rich Low_complexity Low_complexity 1 29 0 7 985 23 68 0 0 chr17 52452449 52452493 -42820158 + AT_rich Low_complexity Low_complexity 1 44 0 7 985 326 322 149 11 chr17 52453117 52453305 -42819346 + MIR SINE MIR 27 240 -22 7 985 5275 74 14 4 chr17 52454570 52455264 -42817387 + L1Md_F2 LINE L1 5869 6569 -13 7 985 210 250 0 0 chr17 52456330 52456390 -42816261 + A-rich Low_complexity Low_complexity 1 60 0 7 985 198 310 51 17 chr17 52456789 52456907 -42815744 + L3b LINE CR1 19 140 -342 7 985 888 230 18 89 chr17 52457660 52457884 -42814767 - B3 SINE B2 -7 209 2 7 985 484 296 0 0 chr17 52458296 52458404 -42814247 + B1_Mur2 SINE Alu 29 136 -13 7 985 2258 37 0 11 chr17 52458404 52458679 -42813972 + L1Md_F2 LINE L1 6301 6572 -10 7 985 204 40 0 0 chr17 52458702 52458727 -42813924 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 7 985 271 288 0 0 chr17 52458752 52458818 -42813833 + GA-rich Low_complexity Low_complexity 3 68 0 7 985 476 59 0 14 chr17 52459230 52459299 -42813352 + (TA)n Simple_repeat Simple_repeat 2 69 0 7 985 21 57 0 0 chr17 52460933 52460968 -42811683 + AT_rich Low_complexity Low_complexity 1 35 0 7 985 296 366 90 21 chr17 52460975 52461120 -42811531 + RSINE1 SINE B4 11 165 0 7 985 342 291 0 0 chr17 52461207 52461310 -42811341 + Lx6 LINE L1 6627 6729 -731 7 985 378 0 0 0 chr17 52461348 52461390 -42811261 + (TTA)n Simple_repeat Simple_repeat 1 42 0 7 985 8233 48 2 1 chr17 52461390 52463143 -42809508 - L1Md_F2 LINE L1 -23 6559 4808 7 985 1281 277 36 20 chr17 52463147 52463656 -42808995 + Lx6 LINE L1 6454 7322 -138 7 985 649 291 11 22 chr17 52464616 52464799 -42807852 + B3A SINE B2 2 182 -16 7 985 21 36 0 0 chr17 52464807 52464835 -42807816 + AT_rich Low_complexity Low_complexity 1 28 0 7 985 337 321 94 36 chr17 52465055 52465330 -42807321 + B4A SINE B4 1 291 -1 7 985 2871 62 61 18 chr17 52465592 52465986 -42806665 + IAPLTR2a LTR ERVK 1 411 0 7 985 924 117 25 100 chr17 52465987 52466187 -42806464 + IAPEz-int LTR ERVK 9 193 -6288 7 985 239 309 0 0 chr17 52466187 52466242 -42806409 + RLTR27 LTR ERVK 221 275 -34 7 985 3491 50 1 16 chr17 52466242 52466820 -42805831 + IAPEz-int LTR ERVK 168 662 -5819 7 985 2612 56 0 3 chr17 52466820 52467163 -42805488 + IAPEz-int LTR ERVK 1359 1700 -4781 7 985 5951 71 12 0 chr17 52467156 52467975 -42804676 + IAPEz-int LTR ERVK 5651 6479 -2 7 985 2870 62 61 18 chr17 52467977 52468371 -42804280 + IAPLTR2a LTR ERVK 1 411 0 7 985 474 65 0 0 chr17 52470339 52470401 -42802250 + (CA)n Simple_repeat Simple_repeat 1 62 0 7 985 279 0 0 0 chr17 52470538 52470569 -42802082 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 985 22 35 0 0 chr17 52471278 52471307 -42801344 + AT_rich Low_complexity Low_complexity 1 29 0 7 985 402 311 66 0 chr17 52471526 52471693 -42800958 - L1M5 LINE L1 -422 5702 5525 7 985 252 59 0 0 chr17 52472998 52473032 -42799619 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 985 713 245 25 58 chr17 52473248 52473423 -42799228 + L1_Mur3 LINE L1 5079 5252 -628 7 985 294 29 0 0 chr17 52473423 52473458 -42799193 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 985 713 245 25 58 chr17 52473458 52473559 -42799092 + L1_Mur3 LINE L1 5253 5346 -534 7 985 1225 347 74 9 chr17 52473588 52474280 -42798371 + Lx8 LINE L1 6556 7292 -181 7 985 23 54 0 0 chr17 52474397 52474434 -42798217 + AT_rich Low_complexity Low_complexity 1 37 0 7 985 8665 99 8 16 chr17 52475154 52477478 -42795173 + Lx3_Mus LINE L1 4698 7004 -5 7 985 955 164 0 58 chr17 52477680 52477868 -42794783 - MTC LTR MaLR -49 372 196 7 985 8764 105 28 10 chr17 52477871 52479218 -42793433 - Lx2 LINE L1 0 6997 5626 7 985 2008 61 11 36 chr17 52479262 52479536 -42793115 - L1_Mus2 LINE L1 -1 6565 6299 7 985 924 36 0 0 chr17 52479714 52479826 -42792825 + (TTTC)n Simple_repeat Simple_repeat 3 114 0 7 985 464 116 11 0 chr17 52479900 52479995 -42792656 + (GA)n Simple_repeat Simple_repeat 2 97 0 7 985 600 338 72 27 chr17 52480186 52480479 -42792172 - MLT1A1 LTR MaLR -21 387 103 7 985 247 305 146 23 chr17 52480895 52481066 -42791585 - LTR16E1 LTR ERVL 0 538 347 7 985 581 124 10 0 chr17 52482178 52482275 -42790376 + (GA)n Simple_repeat Simple_repeat 1 98 0 7 985 351 294 70 12 chr17 52482305 52482391 -42790260 - RSINE1 SINE B4 -72 93 3 7 985 288 247 0 0 chr17 52482737 52482822 -42789829 + (CA)n Simple_repeat Simple_repeat 1 85 0 7 985 180 246 138 17 chr17 52482924 52482982 -42789669 - L4 LINE RTE -278 1751 1687 7 985 310 214 22 11 chr17 52483360 52483450 -42789201 - Lx9 LINE L1 -153 7491 7401 7 985 213 343 10 0 chr17 52483491 52483593 -42789058 + GA-rich Low_complexity Low_complexity 1 103 0 7 985 214 179 35 18 chr17 52483516 52483573 -42789078 + (CAGA)n Simple_repeat Simple_repeat 2 59 0 7 985 322 332 124 66 chr17 52483604 52483846 -42788805 - B4A SINE B4 -35 257 2 7 985 315 141 0 0 chr17 52484432 52484496 -42788155 + (CCAA)n Simple_repeat Simple_repeat 2 65 0 7 985 1100 82 0 20 chr17 52484604 52484754 -42787897 + B1_Mm SINE Alu 1 147 0 7 985 180 0 0 0 chr17 52484754 52484774 -42787877 + (A)n Simple_repeat Simple_repeat 1 20 0 7 985 216 268 18 0 chr17 52485874 52485930 -42786721 + CT-rich Low_complexity Low_complexity 2 58 0 7 985 241 327 9 45 chr17 52488076 52488188 -42784463 + CT-rich Low_complexity Low_complexity 2 109 0 7 985 258 32 0 0 chr17 52488600 52488631 -42784020 + (TC)n Simple_repeat Simple_repeat 2 32 0 7 985 287 105 69 17 chr17 52489547 52489605 -42783046 + 4.5SRNA scRNA scRNA 24 84 -10 7 985 785 64 0 18 chr17 52489554 52489656 -42782995 + B1_Mus1 SINE Alu 38 139 -9 7 985 243 0 0 0 chr17 52489656 52489683 -42782968 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 985 294 29 0 0 chr17 52489770 52489805 -42782846 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 985 888 124 0 0 chr17 52489805 52489973 -42782678 + (GA)n Simple_repeat Simple_repeat 2 170 0 7 985 258 232 0 0 chr17 52491357 52491469 -42781182 + CT-rich Low_complexity Low_complexity 1 112 0 7 985 410 0 0 20 chr17 52491861 52491912 -42780739 + (TTA)n Simple_repeat Simple_repeat 2 51 0 7 985 222 128 0 0 chr17 52492163 52492202 -42780449 + (A)n Simple_repeat Simple_repeat 1 39 0 7 985 506 333 8 0 chr17 52493278 52493410 -42779241 - B3A SINE B2 -18 180 48 7 985 216 67 0 0 chr17 52493800 52493830 -42778821 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 985 1180 311 104 25 chr17 52495444 52496194 -42776457 - Lx8 LINE L1 -31 7442 6634 7 985 1696 239 63 10 chr17 52496201 52496271 -42776380 - MTD LTR MaLR -1 418 341 7 985 3275 157 36 16 chr17 52496271 52496846 -42775805 - Lx LINE L1 -5 6649 6063 7 985 1696 239 63 10 chr17 52496846 52497172 -42775479 - MTD LTR MaLR -79 340 2 7 985 425 232 131 24 chr17 52497172 52497293 -42775358 - MTD-int LTR MaLR 0 1258 1138 7 985 4991 110 26 13 chr17 52497293 52498047 -42774604 - Lx LINE L1 -6 6648 5885 8 985 425 232 131 24 chr17 52498047 52498093 -42774558 - MTD-int LTR MaLR -121 1137 1073 7 985 3350 186 57 13 chr17 52498132 52499620 -42773031 + L1_Mur3 LINE L1 497 2051 -3829 8 985 1560 182 29 9 chr17 52499640 52499990 -42772661 + L1_Mur3 LINE L1 2148 2504 -3376 8 985 15675 167 32 22 chr17 52500001 52503182 -42769469 + Lx6 LINE L1 2533 5763 -117 1 985 1796 86 10 73 chr17 52503182 52503471 -42769180 + L1_Mus2 LINE L1 6295 6565 -1 2 985 15675 234 44 45 chr17 52503471 52505169 -42767482 + Lx6 LINE L1 5764 7459 -1 1 985 3853 244 36 61 chr17 52505172 52506002 -42766649 - MTD-int LTR MaLR -192 1066 245 3 985 1941 115 62 0 chr17 52506002 52506307 -42766344 - Lx LINE L1 -11 6643 6320 4 985 3853 244 36 61 chr17 52506307 52506544 -42766107 - MTD-int LTR MaLR -1014 244 25 3 985 1373 237 153 0 chr17 52506554 52506900 -42765751 - MTD LTR MaLR 0 419 21 3 985 315 0 0 0 chr17 52506903 52506938 -42765713 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 5 985 3294 268 79 39 chr17 52507057 52509069 -42763582 - Lx7 LINE L1 -1145 6551 4455 6 985 2493 74 6 0 chr17 52509083 52509409 -42763242 - L1_Mus1 LINE L1 -3 6564 6237 7 985 7256 68 4 3 chr17 52509409 52511040 -42761611 - L1Md_F2 LINE L1 -4 6578 4948 8 985 7865 70 3 24 chr17 52511039 52512186 -42760465 + L1Md_F2 LINE L1 3813 4934 -949 8 985 330 0 0 0 chr17 52512187 52512225 -42760426 - L1_Mus1 LINE L1 -316 6251 6214 7 985 573 52 0 0 chr17 52512225 52512302 -42760349 + (TC)n Simple_repeat Simple_repeat 2 78 0 9 985 3992 261 83 32 chr17 52512347 52514350 -42758301 - Lx7 LINE L1 -1527 4353 2249 6 985 39503 6 0 1 chr17 52514340 52521129 -42751522 - L1Md_A LINE L1 -1 6581 1 1 985 2754 97 13 2 chr17 52521238 52521631 -42751020 - Lx LINE L1 -6 6648 6252 1 985 4088 165 29 11 chr17 52521631 52522469 -42750182 + L1_Mm LINE L1 4550 5402 -481 1 985 1598 269 140 4 chr17 52522468 52523288 -42749363 - Lx7 LINE L1 -3691 2189 1258 6 985 468 140 0 0 chr17 52523315 52523422 -42749229 + (TCTG)n Simple_repeat Simple_repeat 2 108 0 1 985 1218 54 0 0 chr17 52523423 52523570 -42749081 - B1_Mus1 SINE Alu -1 147 1 1 985 4150 127 17 14 chr17 52524352 52524991 -42747660 - Lx LINE L1 -10 6644 6004 1 985 797 231 59 20 chr17 52526244 52526447 -42746204 + B4A SINE B4 1 211 -81 1 985 418 332 36 14 chr17 52526451 52526671 -42745980 + Lx8 LINE L1 7218 7442 -31 1 985 328 210 54 162 chr17 52526676 52526824 -42745827 + MT2B LTR ERVL 123 254 -347 1 985 687 230 7 28 chr17 52526731 52526874 -42745777 + B1_Mur1 SINE Alu 9 148 -1 1 985 319 293 49 0 chr17 52527331 52527413 -42745238 - Tigger5 DNA MER2_type -27 2379 2294 2 985 388 284 17 17 chr17 52527509 52527627 -42745024 - Tigger5 DNA MER2_type -2269 137 20 2 985 634 298 29 15 chr17 52527954 52528182 -42744469 + MLT2D LTR ERVL 24 253 -144 2 985 235 366 104 16 chr17 52528844 52528969 -42743682 + B4A SINE B4 60 195 -97 2 985 8071 108 49 5 chr17 52530281 52531842 -42740809 + Lx3_Mus LINE L1 5347 6992 -17 2 985 339 25 0 0 chr17 52531844 52531884 -42740767 + (TTAA)n Simple_repeat Simple_repeat 1 40 0 2 985 181 118 0 38 chr17 52532055 52532108 -42740543 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 2 985 196 375 12 12 chr17 52532368 52532449 -42740202 - MIRc SINE MIR -76 192 112 2 985 1836 212 95 59 chr17 52533063 52533608 -42739043 + RMER2 LTR ERV1 1 565 -2 2 985 4702 102 10 12 chr17 52533630 52534403 -42738248 + MusHAL1 LINE L1 335 1106 -1606 2 985 19841 48 3 1 chr17 52534403 52537704 -42734947 - L1Md_F3 LINE L1 0 6584 3294 2 985 17322 180 11 3 chr17 52537703 52539570 -42733081 + Lx LINE L1 2299 4176 -1710 3 985 190 73 0 47 chr17 52539570 52539613 -42733038 + (CTATA)n Simple_repeat Simple_repeat 5 45 0 3 985 17322 180 11 3 chr17 52539613 52540162 -42732489 + Lx LINE L1 4177 4732 -1154 3 985 225 0 0 0 chr17 52540162 52540187 -42732464 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 3 985 17322 142 19 7 chr17 52540187 52542067 -42730584 + Lx LINE L1 4733 6638 -16 3 985 267 114 0 0 chr17 52542067 52542111 -42730540 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 985 1463 163 12 4 chr17 52542847 52543105 -42729546 - Lx3A LINE L1 -2 6979 6720 3 985 200 176 19 19 chr17 52543957 52544009 -42728642 + (TA)n Simple_repeat Simple_repeat 1 52 0 3 985 423 106 0 0 chr17 52544347 52544413 -42728238 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 985 284 331 42 28 chr17 52545549 52545692 -42726959 + B3 SINE B2 59 203 -13 3 985 230 194 14 0 chr17 52545692 52545764 -42726887 + (CA)n Simple_repeat Simple_repeat 1 73 0 3 985 24 0 0 0 chr17 52545835 52545859 -42726792 + AT_rich Low_complexity Low_complexity 1 24 0 3 985 3552 269 62 15 chr17 52545887 52547074 -42725577 + Lx9 LINE L1 6318 7560 -84 4 985 1444 231 92 12 chr17 52547080 52547417 -42725234 - MTD LTR MaLR -55 364 1 4 985 269 350 86 0 chr17 52547515 52547632 -42725019 + MER5A DNA MER1_type 15 141 -48 4 985 3922 130 17 8 chr17 52547634 52548278 -42724373 - Lx4A LINE L1 -381 6677 6028 4 985 222 37 0 0 chr17 52549059 52549086 -42723565 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 985 180 284 157 52 chr17 52549632 52549747 -42722904 - MIR SINE MIR -11 251 125 4 985 1130 266 122 6 chr17 52549922 52550251 -42722400 + ORR1D2 LTR MaLR 4 370 0 4 985 744 94 0 0 chr17 52553230 52553336 -42719315 + (TA)n Simple_repeat Simple_repeat 1 106 0 4 985 25 65 0 0 chr17 52553442 52553488 -42719163 + AT_rich Low_complexity Low_complexity 1 46 0 4 985 821 339 18 21 chr17 52554019 52554302 -42718349 + B4 SINE B4 9 290 -2 4 985 203 237 0 0 chr17 52554304 52554342 -42718309 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 985 332 338 46 68 chr17 52554459 52554696 -42717955 + RSINE1 SINE B4 78 281 -11 5 985 180 341 137 15 chr17 52555323 52555454 -42717197 - MIR SINE MIR -21 241 95 5 985 1097 338 104 8 chr17 52556016 52556521 -42716130 + Charlie1a DNA MER1_type 58 606 -849 5 985 3228 47 12 2 chr17 52556521 52556925 -42715726 + L1Md_F3 LINE L1 6174 6581 -3 5 985 1097 338 104 8 chr17 52556925 52556950 -42715701 + Charlie1a DNA MER1_type 607 638 -817 5 985 644 285 71 30 chr17 52556961 52557258 -42715393 + Charlie1a DNA MER1_type 758 1066 -389 5 985 323 370 17 69 chr17 52557806 52557980 -42714671 - B4A SINE B4 -127 165 1 5 985 362 284 162 31 chr17 52558670 52558830 -42713821 - B3A SINE B2 -17 181 1 5 985 373 261 23 0 chr17 52559498 52559586 -42713065 - PB1D10 SINE Alu -7 110 21 5 985 262 243 70 14 chr17 52559797 52559868 -42712783 + MLT1J LTR MaLR 55 129 -383 5 986 409 345 107 46 chr17 52562854 52563134 -42709517 - ORR1E LTR MaLR -62 297 1 5 986 3571 39 18 5 chr17 52563139 52563581 -42709070 + L1Md_T LINE L1 6135 6582 0 6 986 3481 70 2 16 chr17 52563911 52564140 -42708511 - L1_Mus1 LINE L1 -494 6073 5849 6 986 3536 15 2 0 chr17 52564140 52564535 -42708116 + MTA_Mm LTR MaLR 1 396 0 6 986 9245 26 6 1 chr17 52564535 52565628 -42707023 + MTA_Mm-int LTR MaLR 1 1098 0 6 986 3536 15 2 0 chr17 52565628 52566023 -42706628 + MTA_Mm LTR MaLR 1 396 0 6 986 3481 81 1 16 chr17 52566023 52566462 -42706189 - L1_Mus1 LINE L1 -35 5848 5412 6 986 3520 72 2 2 chr17 52566464 52566921 -42705730 + L1_Mus1 LINE L1 6110 6566 -1 6 986 210 167 0 59 chr17 52567278 52567329 -42705322 + CT-rich Low_complexity Low_complexity 5 52 0 6 986 3336 114 85 0 chr17 52567636 52568154 -42704497 - Lx3C LINE L1 -2 6974 6413 6 986 2076 263 44 19 chr17 52568361 52569275 -42703376 + L1MCa LINE L1 2139 3086 -3235 6 986 389 273 119 57 chr17 52569468 52569786 -42702865 + L1MCa LINE L1 3656 3993 -2328 6 986 489 62 0 0 chr17 52570319 52570384 -42702267 + (TG)n Simple_repeat Simple_repeat 1 65 0 6 986 420 20 0 0 chr17 52570384 52570432 -42702219 + (GA)n Simple_repeat Simple_repeat 1 49 0 6 986 1153 202 57 57 chr17 52570485 52570747 -42701904 + MTC LTR MaLR 21 282 -139 6 986 259 174 189 16 chr17 52572168 52572244 -42700407 + MTC LTR MaLR 258 383 -36 6 986 312 27 0 0 chr17 52572244 52572281 -42700370 + (TCTTG)n Simple_repeat Simple_repeat 1 37 0 7 986 1062 144 0 0 chr17 52572281 52572461 -42700190 + (TCCTG)n Simple_repeat Simple_repeat 1 180 0 7 986 315 0 0 0 chr17 52572475 52572510 -42700141 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 7 986 912 222 35 20 chr17 52572785 52572987 -42699664 + B3 SINE B2 3 207 -9 7 986 307 320 26 0 chr17 52573159 52573237 -42699414 - ID SINE ID -141 83 4 7 986 21 0 0 0 chr17 52573836 52573857 -42698794 + AT_rich Low_complexity Low_complexity 1 21 0 7 986 481 219 102 0 chr17 52574564 52574751 -42697900 - Lx9 LINE L1 -16 7628 7423 7 986 638 264 11 6 chr17 52574744 52574923 -42697728 - Lx9 LINE L1 -329 7315 7136 7 986 498 17 0 0 chr17 52575122 52575181 -42697470 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 986 329 324 116 21 chr17 52575236 52575573 -42697078 + Lx8 LINE L1 6097 6465 -1008 7 986 10105 145 21 32 chr17 52575579 52576418 -42696233 - Lx4B LINE L1 -762 6296 5447 7 986 200 59 29 0 chr17 52576418 52576452 -42696199 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 8 986 10105 139 10 53 chr17 52576452 52577928 -42694723 - Lx4B LINE L1 -431 5446 4037 7 986 1093 348 31 24 chr17 52577959 52578633 -42694018 + Lx8 LINE L1 6793 7471 -2 7 986 732 278 140 27 chr17 52578789 52579203 -42693448 + Lx9 LINE L1 7155 7615 -29 8 986 442 295 0 24 chr17 52579221 52579346 -42693305 - MTD LTR MaLR -292 127 6 8 986 373 352 61 107 chr17 52579351 52579713 -42692938 - MLT2B3 LTR ERVL -254 463 118 8 986 261 219 0 99 chr17 52580636 52580707 -42691944 + MLT1C LTR MaLR 54 117 -350 8 986 255 312 273 0 chr17 52580809 52580952 -42691699 + MLT1C LTR MaLR 280 461 -6 8 986 245 300 82 37 chr17 52581145 52581280 -42691371 - RLTR22_Mur LTR ERVK -401 1447 1307 8 986 972 273 222 34 chr17 52581280 52581891 -42690760 - Lx9 LINE L1 -146 7498 6773 8 986 1438 160 90 142 chr17 52583714 52584079 -42688572 + ORR1B1 LTR MaLR 47 392 -2 8 986 325 311 8 90 chr17 52584093 52584227 -42688424 + RSINE1 SINE B4 43 165 0 8 986 506 91 13 0 chr17 52584465 52584542 -42688109 + (GA)n Simple_repeat Simple_repeat 2 79 0 8 986 243 0 0 0 chr17 52584542 52584569 -42688082 + (GGA)n Simple_repeat Simple_repeat 2 28 0 9 986 533 316 75 29 chr17 52584627 52585253 -42687398 + L1M2 LINE L1 2041 2695 -4154 9 986 384 333 85 0 chr17 52585450 52585615 -42687036 + Lx8 LINE L1 7105 7283 -190 9 986 445 260 115 14 chr17 52585619 52585767 -42686884 + MTE2a LTR MaLR 201 363 -16 9 986 1069 281 71 15 chr17 52585779 52586314 -42686337 + L1M2 LINE L1 3170 3734 -3111 9 986 343 342 24 77 chr17 52586323 52586491 -42686160 + B4A SINE B4 46 204 -88 9 986 246 295 13 0 chr17 52586583 52586661 -42685990 + (CATA)n Simple_repeat Simple_repeat 1 79 0 9 986 246 292 142 9 chr17 52586664 52586882 -42685769 + L1M2 LINE L1 4004 4253 -2592 9 986 408 88 0 0 chr17 52586886 52586943 -42685708 + (TTCA)n Simple_repeat Simple_repeat 4 60 0 9 986 6115 62 7 1 chr17 52586943 52587766 -42684885 - L1_Mus1 LINE L1 -6 6561 5734 9 986 470 238 29 0 chr17 52588193 52588298 -42684353 + PB1D7 SINE Alu 5 112 -8 9 986 870 43 0 0 chr17 52588559 52588674 -42683977 + (TG)n Simple_repeat Simple_repeat 2 116 0 9 986 755 230 20 13 chr17 52588681 52588831 -42683820 - B3A SINE B2 -47 151 1 1 986 361 267 47 47 chr17 52588905 52589011 -42683640 + PB1D10 SINE Alu 10 115 -2 1 986 22 56 0 0 chr17 52589977 52590013 -42682638 + AT_rich Low_complexity Low_complexity 1 36 0 1 986 384 331 0 23 chr17 52591074 52591207 -42681444 + B3A SINE B2 68 197 -1 1 986 935 228 41 0 chr17 52591674 52591871 -42680780 - B3 SINE B2 -9 207 3 1 986 2538 207 114 16 chr17 52591901 52592646 -42680005 - RMER1B Other Other -1 1065 239 1 986 304 343 145 38 chr17 52593618 52593936 -42678715 + MLT2F LTR ERVL 5 356 -307 1 986 2425 182 57 40 chr17 52593979 52594528 -42678123 - RLTR20B3 LTR ERVK -14 563 6 1 986 237 333 0 19 chr17 52595350 52595454 -42677197 - Kanga1 DNA Tc2 -62 1683 1582 1 986 351 0 0 0 chr17 52595454 52595493 -42677158 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 986 438 332 88 59 chr17 52595595 52595808 -42676843 + B4A SINE B4 1 210 -82 1 986 2497 170 37 16 chr17 52595808 52596321 -42676330 + RLTR28 LTR ERVL 1 524 0 1 986 438 332 88 59 chr17 52596321 52596379 -42676272 + B4A SINE B4 211 280 -12 1 986 412 290 194 0 chr17 52596466 52596590 -42676061 + B3A SINE B2 7 154 -44 1 986 369 0 0 0 chr17 52596591 52596632 -42676019 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 986 782 265 23 19 chr17 52596661 52596876 -42675775 + B3 SINE B2 1 216 0 1 986 244 309 59 105 chr17 52597011 52597163 -42675488 - Kanga1 DNA Tc2 -436 1309 1165 1 986 267 294 0 32 chr17 52597165 52597260 -42675391 - Kanga1 DNA Tc2 -1638 107 16 1 986 228 274 0 19 chr17 52597281 52597385 -42675266 + A-rich Low_complexity Low_complexity 1 102 0 1 986 527 43 14 0 chr17 52597756 52597826 -42674825 + (GA)n Simple_repeat Simple_repeat 1 71 0 1 986 678 13 0 0 chr17 52602086 52602165 -42670486 + (TG)n Simple_repeat Simple_repeat 2 80 0 1 986 543 344 7 7 chr17 52602447 52602602 -42670049 - RSINE1 SINE B4 -6 159 5 1 986 200 177 0 31 chr17 52603146 52603210 -42669441 + (TCTCTG)n Simple_repeat Simple_repeat 3 64 0 1 986 630 281 7 28 chr17 52605590 52605756 -42666895 + B3A SINE B2 2 163 -53 1 986 258 182 0 0 chr17 52605857 52605923 -42666728 + (TGGA)n Simple_repeat Simple_repeat 4 69 0 1 986 272 253 195 0 chr17 52606058 52606145 -42666506 - PB1D10 SINE Alu -13 104 1 1 986 261 0 0 0 chr17 52606347 52606376 -42666275 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 986 736 230 74 133 chr17 52606958 52607229 -42665422 - MTE2a LTR MaLR -124 255 1 1 986 684 344 64 20 chr17 52607681 52608025 -42664626 - ORR1E LTR MaLR 0 359 1 1 986 672 364 95 23 chr17 52608235 52608722 -42663929 - MER74B LTR ERVL -106 516 1 1 986 424 226 75 38 chr17 52608724 52608857 -42663794 + MIR SINE MIR 96 233 -29 1 986 1191 55 7 0 chr17 52609994 52610140 -42662511 + B1_Mus2 SINE Alu 1 147 0 1 986 249 193 123 0 chr17 52610920 52610977 -42661674 - AmnSINE1 SINE SINE -4 571 508 1 986 367 270 50 28 chr17 52610978 52611119 -42661532 - MIRb SINE MIR -73 195 52 1 986 41452 20 3 6 chr17 52611596 52618192 -42654459 - L1Md_A LINE L1 -1 6581 7 1 986 242 264 0 0 chr17 52618224 52618277 -42654374 - MLT1F LTR MaLR 0 548 496 1 986 254 374 43 38 chr17 52619493 52619704 -42652947 + Charlie15a DNA MER1_type 9 220 -4 1 986 1225 172 41 14 chr17 52620337 52620555 -42652096 + URR1B DNA MER1_type 2 225 0 1 986 4655 107 16 2 chr17 52620802 52621439 -42651212 - L1_Mus3 LINE L1 -4 6634 5989 1 986 1625 85 5 0 chr17 52621455 52621666 -42650985 + L1_Mus4 LINE L1 5705 5916 -720 1 986 6618 131 18 34 chr17 52621663 52622990 -42649661 - Lx LINE L1 0 6654 5363 1 986 1517 216 118 3 chr17 52622990 52623339 -42649312 - MTD LTR MaLR -30 389 1 1 986 1842 72 100 4 chr17 52623633 52623884 -42648767 + L1_Mus2 LINE L1 6292 6566 0 1 986 284 384 0 0 chr17 52624104 52624216 -42648435 + LTR16C LTR ERVL 183 294 -195 1 986 697 307 67 88 chr17 52624211 52624501 -42648150 - MTD LTR MaLR -10 409 109 1 986 450 88 0 0 chr17 52624501 52624569 -42648082 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 986 697 307 67 88 chr17 52624569 52624696 -42647955 - MTD LTR MaLR -311 108 1 1 986 368 341 106 22 chr17 52624699 52624879 -42647772 + LTR16C LTR ERVL 295 489 0 1 986 233 312 13 0 chr17 52624882 52624959 -42647692 + MIRc SINE MIR 115 192 -76 1 986 2824 61 35 0 chr17 52624979 52625322 -42647329 + L1_Mus1 LINE L1 6213 6567 0 1 986 818 222 36 40 chr17 52625710 52625935 -42646716 - RMER13B LTR ERVK -9 899 676 1 986 3444 101 2 37 chr17 52625935 52626427 -42646224 + IAPLTR2_Mm LTR ERVK 1 475 0 1 986 4911 67 0 37 chr17 52626437 52627089 -42645562 + IAPEz-int LTR ERVK 35 662 -5819 1 986 979 59 0 0 chr17 52627089 52627208 -42645443 + IAPEz-int LTR ERVK 1359 1477 -5004 1 986 1863 102 0 0 chr17 52627209 52627455 -42645196 + IAPEz-int LTR ERVK 2252 2497 -5183 1 986 15467 37 4 3 chr17 52627473 52629275 -42643376 + IAPEz-int LTR ERVK 4678 6481 0 1 986 3468 97 2 37 chr17 52629275 52629767 -42642884 + IAPLTR2_Mm LTR ERVK 1 475 0 1 986 1247 234 18 81 chr17 52629767 52630247 -42642404 - RMER13B LTR ERVK -220 738 299 1 986 529 336 0 7 chr17 52630895 52631042 -42641609 + RSINE1 SINE B4 3 148 -17 1 986 1599 179 111 23 chr17 52631432 52631776 -42640875 + ORR1D1 LTR MaLR 1 374 0 1 986 453 239 9 35 chr17 52632114 52632227 -42640424 - B1_Mur1 SINE Alu 0 149 40 1 986 403 206 168 0 chr17 52632703 52632810 -42639841 - Lx8 LINE L1 -572 6901 6777 1 986 420 227 154 15 chr17 52634786 52634916 -42637735 - MamGypLTR1a LTR Gypsy -4 780 633 1 986 829 206 6 6 chr17 52635596 52635752 -42636899 + URR1B DNA MER1_type 1 156 -69 1 986 180 0 0 0 chr17 52635884 52635904 -42636747 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 986 252 292 0 26 chr17 52635904 52636013 -42636638 + MER53 DNA hAT 28 134 -59 1 986 423 0 0 0 chr17 52636890 52636937 -42635714 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 986 927 291 101 42 chr17 52637243 52637885 -42634766 + L1MA7 LINE L1 5254 5933 -358 1 986 386 276 10 10 chr17 52637953 52638052 -42634599 + B3A SINE B2 2 100 -98 1 986 204 67 0 0 chr17 52639286 52639316 -42633335 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 1 986 210 37 0 0 chr17 52639945 52639972 -42632679 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 986 630 105 0 0 chr17 52639972 52640086 -42632565 + (GA)n Simple_repeat Simple_repeat 1 114 0 1 986 291 290 65 9 chr17 52640412 52640520 -42632131 + RMER15 LTR ERVL 397 510 -65 1 986 593 234 35 42 chr17 52641474 52641622 -42631029 + B3A SINE B2 1 160 -38 1 986 351 0 0 0 chr17 52641622 52641661 -42630990 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 986 334 264 119 141 chr17 52641661 52641697 -42630954 + B2_Mm2 SINE B2 151 181 -14 1 986 1082 226 38 58 chr17 52641708 52642055 -42630596 - Lx7 LINE L1 0 7696 7357 1 986 22 56 0 0 chr17 52642055 52642091 -42630560 + AT_rich Low_complexity Low_complexity 1 36 0 1 986 442 81 26 147 chr17 52642157 52642548 -42630103 + (CACAA)n Simple_repeat Simple_repeat 1 343 0 1 986 243 208 0 19 chr17 52642556 52642610 -42630041 - Lx7 LINE L1 -345 7351 7299 1 986 7107 102 46 4 chr17 52642660 52642775 -42629876 - Lx LINE L1 -5 6649 6538 1 986 270 0 0 0 chr17 52642775 52642805 -42629846 + (CCCA)n Simple_repeat Simple_repeat 4 33 0 1 986 7107 117 39 3 chr17 52642805 52644048 -42628603 - Lx LINE L1 -117 6537 5243 1 986 5820 86 3 16 chr17 52644052 52644813 -42627838 - L1_Mus2 LINE L1 0 6566 5816 1 986 5312 90 3 1 chr17 52644813 52645524 -42627127 + L1_Mus2 LINE L1 5094 5805 -78 1 986 1125 111 0 0 chr17 52645522 52645675 -42626976 - L1_Mur2 LINE L1 -622 5255 5103 1 986 304 367 39 20 chr17 52646187 52646340 -42626311 + MIR SINE MIR 107 262 0 1 986 285 209 30 30 chr17 52647755 52647888 -42624763 + (TATAA)n Simple_repeat Simple_repeat 5 137 0 1 986 183 129 0 0 chr17 52647978 52648009 -42624642 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 986 3463 173 68 74 chr17 52648178 52648340 -42624311 - RMER1A Other Other 0 1030 873 1 986 288 0 0 0 chr17 52648340 52648372 -42624279 + (CAGA)n Simple_repeat Simple_repeat 2 33 0 1 986 3463 180 74 69 chr17 52648372 52649012 -42623639 - RMER1A Other Other -158 872 275 1 986 583 313 40 42 chr17 52649238 52649469 -42623182 + MTD LTR MaLR 14 267 -152 1 986 366 249 156 26 chr17 52649510 52649641 -42623010 + MTD LTR MaLR 245 404 -15 1 986 21 57 0 0 chr17 52650758 52650793 -42621858 + AT_rich Low_complexity Low_complexity 1 35 0 1 986 356 318 73 70 chr17 52650948 52651381 -42621270 + MLT2C2 LTR ERVL 33 464 0 1 986 702 65 0 0 chr17 52651445 52651537 -42621114 + (TTTC)n Simple_repeat Simple_repeat 1 92 0 1 986 246 105 0 0 chr17 52651537 52651575 -42621076 + (TCCC)n Simple_repeat Simple_repeat 1 38 0 1 986 978 135 0 17 chr17 52651575 52651756 -42620895 + CT-rich Low_complexity Low_complexity 2 179 0 1 986 30471 98 9 43 chr17 52651761 52656190 -42616461 - L1_Mus1 LINE L1 0 6567 2161 1 986 6304 36 6 3 chr17 52656190 52656905 -42615746 - L1Md_F3 LINE L1 -1 6583 5867 1 986 30471 134 58 50 chr17 52656905 52659006 -42613645 - L1_Mus1 LINE L1 -3723 2160 184 1 986 1110 76 84 132 chr17 52659364 52659591 -42613060 + L1Md_F2 LINE L1 6365 6580 -2 1 986 21 57 0 0 chr17 52659591 52659626 -42613025 + AT_rich Low_complexity Low_complexity 1 35 0 1 986 189 0 0 0 chr17 52659629 52659650 -42613001 + (GAA)n Simple_repeat Simple_repeat 2 22 0 1 986 3632 66 48 17 chr17 52659650 52660126 -42612525 + L1_Mus2 LINE L1 6062 6552 -14 1 986 279 0 0 0 chr17 52660126 52660157 -42612494 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 986 309 51 0 0 chr17 52660157 52660195 -42612456 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 986 506 264 89 89 chr17 52660270 52660428 -42612223 - ID_B1 SINE B4 -49 243 82 1 986 243 289 53 53 chr17 52660343 52660438 -42612213 - MT2B2 LTR ERVL -337 247 153 1 986 711 286 24 19 chr17 52660997 52661204 -42611447 - MER3 DNA MER1_type -1 208 1 1 986 457 70 0 0 chr17 52661768 52661825 -42610826 - L1Md_F2 LINE L1 -325 6257 6201 1 986 2849 61 0 9 chr17 52661825 52662172 -42610479 + L1Md_F2 LINE L1 6228 6571 -11 1 986 273 162 46 29 chr17 52662429 52662545 -42610106 + B3 SINE B2 1 216 0 1 986 231 247 78 49 chr17 52662656 52662758 -42609893 - MER3 DNA MER1_type -5 204 100 1 986 248 211 105 0 chr17 52662786 52662881 -42609770 - Lx9 LINE L1 0 7644 7540 1 986 311 96 19 0 chr17 52662881 52662933 -42609718 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 986 21 57 0 0 chr17 52662937 52662972 -42609679 + AT_rich Low_complexity Low_complexity 1 35 0 2 986 1653 271 15 8 chr17 52663143 52663541 -42609110 + Lx9 LINE L1 6613 7013 -631 2 986 269 276 40 30 chr17 52663549 52663650 -42609001 - MER3 DNA MER1_type -107 102 1 1 986 203 152 0 0 chr17 52664760 52664793 -42607858 + GA-rich Low_complexity Low_complexity 4 36 0 2 986 227 279 33 0 chr17 52665182 52665243 -42607408 + MER20 DNA MER1_type 152 214 -5 2 986 236 328 98 32 chr17 52665844 52665967 -42606684 + LTR78 LTR ERV1 384 514 -790 2 986 585 256 101 19 chr17 52666945 52667200 -42605451 - MER34B-int LTR ERV1 -2207 3149 2677 2 986 297 0 0 0 chr17 52667326 52667359 -42605292 + (TATG)n Simple_repeat Simple_repeat 2 34 0 2 986 304 219 108 14 chr17 52667417 52667491 -42605160 - B4A SINE B4 -23 269 189 2 986 246 178 0 0 chr17 52667491 52667536 -42605115 - MT2A LTR ERVL 0 533 489 2 986 477 0 0 0 chr17 52667536 52667589 -42605062 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 986 536 29 14 0 chr17 52667591 52667661 -42604990 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 2 986 397 0 38 0 chr17 52667705 52667758 -42604893 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 2 986 477 50 0 0 chr17 52667793 52667853 -42604798 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 986 904 281 70 47 chr17 52667857 52668306 -42604345 - MT2B LTR ERVL -55 546 1 2 986 345 297 37 92 chr17 52668306 52668460 -42604191 - B4A SINE B4 -114 178 34 2 986 373 288 45 89 chr17 52668470 52668502 -42604149 - B2_Mm2 SINE B2 -2 193 165 2 986 240 59 0 0 chr17 52668502 52668536 -42604115 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 986 623 288 45 89 chr17 52668536 52668705 -42603946 - B3A SINE B2 -31 164 1 2 986 384 340 42 0 chr17 52669238 52669382 -42603269 - Tigger7 DNA MER2_type -2103 388 239 2 986 2153 261 99 26 chr17 52669509 52670657 -42601994 + RMER1A Other Other 16 725 -305 2 986 23423 152 6 14 chr17 52670671 52676951 -42595700 + L1_Mus4 LINE L1 404 6628 -8 2 986 1292 142 16 95 chr17 52676977 52677281 -42595370 + RMER1B Other Other 785 1064 -2 2 986 285 279 30 15 chr17 52677433 52677564 -42595087 + (TATG)n Simple_repeat Simple_repeat 2 134 0 2 986 574 316 68 50 chr17 52677567 52677847 -42594804 - MLT2C1 LTR ERVL -71 326 42 2 986 276 229 49 0 chr17 52678061 52678122 -42594529 + PB1D10 SINE Alu 47 110 -7 2 986 334 340 6 59 chr17 52679488 52679657 -42592994 + B4A SINE B4 133 292 0 2 986 516 283 81 92 chr17 52680148 52680541 -42592110 + RMER10A LTR ERVL 1 389 -53 2 986 306 0 0 0 chr17 52681721 52681755 -42590896 + (CACAG)n Simple_repeat Simple_repeat 1 34 0 2 986 33691 45 8 5 chr17 52682149 52687547 -42585104 + L1Md_Gf LINE L1 76 5589 -297 2 986 8222 42 2 0 chr17 52687547 52688541 -42584110 + L1Md_T LINE L1 5587 6582 0 2 986 323 262 120 9 chr17 52688759 52688867 -42583784 + L1M4c LINE L1 1495 1614 -5720 2 986 614 279 3 136 chr17 52688886 52689080 -42583571 + B3A SINE B2 1 166 -29 2 986 360 0 0 0 chr17 52689083 52689123 -42583528 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 986 301 188 12 12 chr17 52689126 52689207 -42583444 + GA-rich Low_complexity Low_complexity 2 82 0 2 986 545 271 23 8 chr17 52689208 52689338 -42583313 + B1_Mur1 SINE Alu 12 143 -6 2 986 347 308 76 98 chr17 52689443 52689504 -42583147 + L1M4c LINE L1 1732 1782 -5226 2 986 2383 56 49 3 chr17 52689504 52689829 -42582822 + L1_Mus2 LINE L1 6227 6566 0 2 986 347 308 76 98 chr17 52689829 52689866 -42582785 + L1M4c LINE L1 1783 1820 -5188 2 986 288 0 0 0 chr17 52689866 52689898 -42582753 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 2 986 347 308 76 98 chr17 52689898 52690349 -42582302 + L1M4c LINE L1 1821 2269 -4739 2 986 26 64 0 0 chr17 52690478 52690525 -42582126 + AT_rich Low_complexity Low_complexity 1 47 0 2 987 263 305 93 21 chr17 52691121 52691218 -42581433 - B3A SINE B2 -84 114 11 2 987 31 58 0 0 chr17 52692258 52692310 -42580341 + AT_rich Low_complexity Low_complexity 1 52 0 2 987 2829 196 64 128 chr17 52692951 52693817 -42578834 + L1VL2 LINE L1 9 743 -5590 2 987 989 50 0 0 chr17 52693817 52693937 -42578714 - MTB_Mm LTR MaLR 0 407 288 2 987 2755 84 42 3 chr17 52693939 52694320 -42578331 - MTA_Mm LTR MaLR 0 396 1 2 987 2829 194 55 149 chr17 52694320 52694444 -42578207 + L1VL2 LINE L1 746 882 -5453 2 987 1190 44 0 19 chr17 52694444 52694605 -42578046 + L1_Mus1 LINE L1 6410 6567 0 2 987 2829 90 7 19 chr17 52694605 52694989 -42577662 + L1VL2 LINE L1 883 1255 -2360 2 987 349 388 86 31 chr17 52695005 52695356 -42577295 - LTR16A LTR ERVL -71 380 11 2 987 533 353 58 29 chr17 52695881 52696193 -42576458 - LTR16E1 LTR ERVL -2 536 216 2 987 246 369 28 28 chr17 52696241 52696347 -42576304 - LTR16E1 LTR ERVL -432 106 1 2 987 1994 211 7 19 chr17 52696671 52697095 -42575556 - MTC LTR MaLR 0 421 3 2 987 23 0 0 0 chr17 52697128 52697151 -42575500 + AT_rich Low_complexity Low_complexity 1 23 0 2 987 2706 214 113 16 chr17 52697340 52698429 -42574222 - Lx9 LINE L1 0 7644 6449 2 987 267 103 0 0 chr17 52698639 52698678 -42573973 + (T)n Simple_repeat Simple_repeat 1 39 0 2 987 617 228 5 47 chr17 52699541 52699734 -42572917 + Lx4B LINE L1 6874 7058 0 2 987 21 57 0 0 chr17 52699742 52699777 -42572874 + AT_rich Low_complexity Low_complexity 1 35 0 2 987 273 288 150 0 chr17 52700322 52700402 -42572249 + PB1D9 SINE Alu 3 94 -26 2 987 246 62 0 0 chr17 52700947 52700979 -42571672 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 987 617 333 69 62 chr17 52701363 52701567 -42571084 + B4A SINE B4 4 220 -72 2 987 3984 113 12 5 chr17 52701567 52702165 -42570486 + L1_Mus3 LINE L1 6035 6636 -2 2 987 617 333 69 62 chr17 52702165 52702235 -42570416 + B4A SINE B4 221 280 -12 2 987 401 211 45 55 chr17 52703944 52704054 -42568597 - ORR1E LTR MaLR -248 111 3 2 987 229 314 13 110 chr17 52704311 52704465 -42568186 - MIRm SINE MIR -86 190 52 2 987 197 289 0 37 chr17 52704548 52704602 -42568049 - MER5A DNA MER1_type -137 52 1 2 987 983 157 0 6 chr17 52704708 52704888 -42567763 + CT-rich Low_complexity Low_complexity 2 180 0 2 987 935 126 52 57 chr17 52704888 52705081 -42567570 - B2_Mm2 SINE B2 -3 192 1 2 987 477 301 60 10 chr17 52706069 52706215 -42566436 + B3 SINE B2 3 147 -69 2 987 342 0 0 0 chr17 52706215 52706253 -42566398 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 987 477 301 60 10 chr17 52706253 52706307 -42566344 + B3 SINE B2 148 212 -4 2 987 45 19 0 0 chr17 52706787 52706839 -42565812 + AT_rich Low_complexity Low_complexity 1 52 0 2 987 300 296 12 12 chr17 52706973 52707055 -42565596 + Arthur1B DNA Tip100 21 102 -1123 2 987 591 15 0 0 chr17 52707120 52707188 -42565463 + (TC)n Simple_repeat Simple_repeat 1 68 0 2 987 221 273 45 0 chr17 52708321 52708387 -42564264 - ID4_ SINE ID -5 78 10 2 987 1187 249 21 24 chr17 52709154 52709483 -42563168 - Lx8 LINE L1 -541 6932 6605 2 987 191 167 24 0 chr17 52709807 52709849 -42562802 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2 987 299 310 39 58 chr17 52710088 52710242 -42562409 - RLTR14 LTR ERV1 0 382 232 2 987 5681 78 20 8 chr17 52710260 52711056 -42561595 - RLTR13D1 LTR ERVK 0 806 1 2 987 266 313 8 25 chr17 52711069 52711187 -42561464 - Lx7 LINE L1 -592 7104 6989 2 987 37 0 0 0 chr17 52711359 52711396 -42561255 + AT_rich Low_complexity Low_complexity 1 37 0 2 987 2395 253 33 23 chr17 52711396 52711814 -42560837 + RCHARR1 DNA MER1_type 273 698 -276 2 987 1329 248 82 10 chr17 52711814 52712205 -42560446 - MTD LTR MaLR 0 419 1 2 987 2395 253 33 23 chr17 52712205 52712481 -42560170 + RCHARR1 DNA MER1_type 699 974 0 2 987 297 0 0 0 chr17 52712534 52712567 -42560084 + (T)n Simple_repeat Simple_repeat 1 33 0 2 987 261 330 165 0 chr17 52712766 52712954 -42559697 + Charlie2b DNA MER1_type 2196 2414 -368 2 987 589 264 115 133 chr17 52713678 52714001 -42558650 + MTE2a LTR MaLR 13 329 -50 2 987 1266 27 0 0 chr17 52714259 52714406 -42558245 - B1_Mm SINE Alu 0 147 1 2 987 303 277 68 19 chr17 52716134 52716237 -42556414 + MLT2B3 LTR ERVL 2 109 -445 2 987 252 291 27 88 chr17 52716262 52716307 -42556344 - RLTR25B LTR ERVK -449 579 539 2 987 222 105 0 0 chr17 52716307 52716345 -42556306 + (TTG)n Simple_repeat Simple_repeat 2 39 0 2 987 252 291 27 88 chr17 52716345 52716446 -42556205 - RLTR25B LTR ERVK -490 538 442 2 987 751 193 15 7 chr17 52716446 52716481 -42556170 - B1_Mus2 SINE Alu -5 142 6 2 987 229 75 195 24 chr17 52716456 52716497 -42556154 - MT2C_Mm LTR ERVL -240 235 188 2 987 924 240 5 5 chr17 52716943 52717140 -42555511 + B3 SINE B2 4 200 -16 2 987 368 312 14 19 chr17 52717224 52717436 -42555215 + L1MA4 LINE L1 4582 4792 -1351 2 987 417 39 0 0 chr17 52717471 52717522 -42555129 + (CAA)n Simple_repeat Simple_repeat 2 52 0 2 987 324 192 205 0 chr17 52717529 52717607 -42555044 - MTC LTR MaLR -327 94 1 2 987 359 281 56 59 chr17 52717659 52718014 -42554637 + L1MA4 LINE L1 5503 5856 -444 2 987 680 224 70 6 chr17 52718026 52718183 -42554468 + MTC LTR MaLR 1 167 -254 2 987 226 316 94 42 chr17 52718280 52718587 -42554064 + L1MA4 LINE L1 5976 6298 -2 2 987 1659 152 116 17 chr17 52718642 52718984 -42553667 - ORR1B1 LTR MaLR -2 392 32 2 987 375 284 52 10 chr17 52719164 52719467 -42553184 + L1M5 LINE L1 5296 5626 -558 2 987 1771 123 8 145 chr17 52719601 52719973 -42552678 - ORR1A4 LTR MaLR -8 321 1 2 987 392 319 68 14 chr17 52720825 52720971 -42551680 - MIRc SINE MIR -1 267 114 2 987 621 349 152 32 chr17 52721032 52721408 -42551243 - LTR16C LTR ERVL 0 489 69 2 987 906 28 0 0 chr17 52721420 52721529 -42551122 + (TC)n Simple_repeat Simple_repeat 2 110 0 2 987 288 0 0 0 chr17 52721634 52721666 -42550985 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2 987 1071 60 0 0 chr17 52721666 52721800 -42550851 - B1_Mus2 SINE Alu -12 135 2 2 987 5234 8 0 0 chr17 52722060 52722686 -42549965 + L1_Mm LINE L1 2305 2930 -2953 2 987 358 226 0 0 chr17 52722821 52722883 -42549768 - RSINE1 SINE B4 -42 123 62 2 987 510 61 0 0 chr17 52723519 52723585 -42549066 + (CA)n Simple_repeat Simple_repeat 2 67 0 2 987 321 336 31 127 chr17 52724323 52724582 -42548069 - MLT1J-int LTR MaLR -425 962 729 2 987 359 372 50 6 chr17 52724783 52724964 -42547687 - MLT1J-int LTR MaLR -944 443 255 2 987 1209 143 16 0 chr17 52725127 52725316 -42547335 - B2_Mm2 SINE B2 -2 193 2 2 987 767 271 0 42 chr17 52725858 52726037 -42546614 + B3 SINE B2 4 176 -40 3 987 1449 46 0 0 chr17 52726037 52726279 -42546372 + (CA)n Simple_repeat Simple_repeat 1 242 0 3 987 767 271 0 42 chr17 52726279 52726313 -42546338 + B3 SINE B2 177 210 -6 3 987 623 266 0 0 chr17 52726889 52727028 -42545623 + B1_Mur1 SINE Alu 9 147 -2 3 987 28 48 0 0 chr17 52727045 52727087 -42545564 + AT_rich Low_complexity Low_complexity 1 42 0 3 987 414 208 0 0 chr17 52727089 52727185 -42545466 - Lx6 LINE L1 -9 7451 7356 3 987 217 159 23 0 chr17 52727185 52727229 -42545422 - B3A SINE B2 -153 45 1 3 987 195 42 0 0 chr17 52727764 52727788 -42544863 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 3 987 1074 92 0 0 chr17 52728037 52728189 -42544462 + (TTTCC)n Simple_repeat Simple_repeat 3 154 0 3 987 1261 115 38 0 chr17 52728211 52728394 -42544257 - B2_Mm2 SINE B2 -5 190 1 3 987 421 329 80 29 chr17 52728653 52728891 -42543760 - RMER15 LTR ERVL -4 571 322 3 987 224 30 0 29 chr17 52729237 52729271 -42543380 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 3 987 783 245 35 0 chr17 52730639 52730839 -42541812 - B3 SINE B2 -9 207 1 3 987 226 316 0 144 chr17 52731235 52731346 -42541305 - LTR53 LTR ERVL -175 344 250 3 987 531 316 39 35 chr17 52731595 52731880 -42540771 - B4A SINE B4 -6 286 1 3 987 299 255 16 0 chr17 52732140 52732207 -42540444 + B4 SINE B4 4 71 -221 3 987 215 298 0 0 chr17 52732258 52732305 -42540346 - B4 SINE B4 -206 86 40 3 987 2005 162 9 6 chr17 52732312 52732634 -42540017 - ORR1B1 LTR MaLR -8 386 64 3 987 255 79 0 0 chr17 52732893 52732931 -42539720 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 3 987 1456 159 142 20 chr17 52732931 52733277 -42539374 - Lx4B LINE L1 -18 7040 6653 3 987 21 36 0 0 chr17 52733564 52733592 -42539059 + AT_rich Low_complexity Low_complexity 1 28 0 3 987 834 300 31 24 chr17 52733803 52734093 -42538558 + B4A SINE B4 1 292 0 3 987 210 91 0 0 chr17 52734121 52734154 -42538497 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 987 513 32 0 0 chr17 52734154 52734217 -42538434 + (TAGA)n Simple_repeat Simple_repeat 1 63 0 3 987 2125 219 76 17 chr17 52734280 52734753 -42537898 - RLTR18B LTR ERVK -11 501 1 3 987 351 113 0 0 chr17 52735091 52735144 -42537507 + (GGAGA)n Simple_repeat Simple_repeat 3 55 0 3 987 1267 56 0 27 chr17 52735144 52735327 -42537324 + (GGGGA)n Simple_repeat Simple_repeat 1 178 0 3 987 960 9 0 0 chr17 52735327 52735435 -42537216 + (GAGAA)n Simple_repeat Simple_repeat 3 111 0 3 987 499 299 79 14 chr17 52736066 52736205 -42536446 + ID_B1 SINE B4 57 204 -20 3 987 453 258 121 0 chr17 52736999 52737123 -42535528 - B1F SINE Alu -2 147 9 3 987 251 93 23 0 chr17 52737488 52737531 -42535120 + (TA)n Simple_repeat Simple_repeat 1 44 0 3 987 354 294 58 16 chr17 52738048 52738169 -42534482 - MTEa LTR MaLR -177 202 77 3 987 543 16 0 0 chr17 52738170 52738234 -42534417 + (CA)n Simple_repeat Simple_repeat 2 65 0 3 987 493 247 187 32 chr17 52739038 52739193 -42533458 + MTEa LTR MaLR 1 179 -200 3 987 369 0 0 0 chr17 52743920 52743961 -42528690 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 987 473 16 33 0 chr17 52744049 52744110 -42528541 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 3 987 2137 123 0 0 chr17 52744708 52745018 -42527633 - Lx2 LINE L1 -1 6996 6687 3 987 291 28 0 0 chr17 52746395 52746431 -42526220 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 987 803 318 165 41 chr17 52746491 52747067 -42525584 - MLT1E1A LTR MaLR 0 680 1 3 987 351 0 0 0 chr17 52747502 52747541 -42525110 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 3 987 387 0 0 0 chr17 52748993 52749036 -42523615 + (CAAAAA)n Simple_repeat Simple_repeat 6 48 0 3 987 288 0 0 0 chr17 52750068 52750100 -42522551 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 3 987 1016 228 35 61 chr17 52751326 52751675 -42520976 - RLTR12B LTR ERVK -250 310 12 3 987 1218 266 86 39 chr17 52752546 52752917 -42519734 + MTD LTR MaLR 3 393 -26 3 987 318 106 0 0 chr17 52752917 52752964 -42519687 + (CAG)n Simple_repeat Simple_repeat 1 47 0 3 987 1218 266 86 39 chr17 52752964 52752976 -42519675 + MTD LTR MaLR 394 403 -16 3 987 759 292 20 79 chr17 52753305 52753610 -42519041 + B4 SINE B4 1 287 -5 3 987 423 83 0 0 chr17 52753637 52753697 -42518954 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 987 22 0 0 0 chr17 52754076 52754098 -42518553 + AT_rich Low_complexity Low_complexity 1 22 0 3 987 306 336 0 0 chr17 52754243 52754353 -42518298 - Lx9 LINE L1 -888 6756 6647 3 987 614 239 198 36 chr17 52754415 52754809 -42517842 - RMER4B LTR ERVK -10 456 17 3 987 717 313 74 3 chr17 52754816 52755134 -42517517 - Lx9 LINE L1 -991 6653 6171 3 987 39 50 0 0 chr17 52755222 52755282 -42517369 + AT_rich Low_complexity Low_complexity 1 60 0 3 987 29 28 0 0 chr17 52755385 52755421 -42517230 + AT_rich Low_complexity Low_complexity 1 36 0 3 987 513 313 88 0 chr17 52755674 52755821 -42516830 - RSINE1 SINE B4 -2 163 4 3 987 762 199 0 33 chr17 52755907 52756058 -42516593 + B3A SINE B2 5 150 -48 3 987 324 0 0 0 chr17 52756062 52756098 -42516553 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 987 546 301 125 29 chr17 52756774 52757263 -42515388 - L1MD2 LINE L1 -24 6335 5800 3 987 5155 63 50 3 chr17 52757961 52758657 -42513994 - L1_Mus3 LINE L1 0 6638 5910 3 987 5169 91 10 1 chr17 52758657 52759489 -42513162 + L1_Mus3 LINE L1 5073 5916 -722 3 987 260 300 0 0 chr17 52759991 52760071 -42512580 + (CA)n Simple_repeat Simple_repeat 1 80 0 3 987 1177 256 62 26 chr17 52760157 52760498 -42512153 + MTD LTR MaLR 5 357 -62 3 987 526 248 55 27 chr17 52761422 52761583 -42511068 - B3 SINE B2 -10 183 2 3 987 1100 241 177 11 chr17 52761638 52761994 -42510657 - MTD LTR MaLR 0 419 5 3 987 26 82 0 0 chr17 52763321 52763382 -42509269 + AT_rich Low_complexity Low_complexity 1 61 0 3 987 235 329 99 13 chr17 52763575 52763726 -42508925 + L2a LINE L2 3256 3419 -7 3 987 939 43 0 0 chr17 52763928 52764044 -42508607 + (TTC)n Simple_repeat Simple_repeat 2 117 0 3 987 1014 45 91 0 chr17 52764044 52764176 -42508475 - B1_Mm SINE Alu -2 145 2 3 987 25 31 0 0 chr17 52764179 52764211 -42508440 + AT_rich Low_complexity Low_complexity 1 32 0 3 987 400 35 35 0 chr17 52764565 52764623 -42508028 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 987 214 316 43 4 chr17 52764756 52764843 -42507808 + MER5B DNA MER1_type 43 133 -56 3 987 1242 248 123 5 chr17 52765354 52765727 -42506924 + MTD LTR MaLR 3 419 0 3 987 1334 259 84 17 chr17 52766664 52767010 -42505641 - ORR1D2 LTR MaLR 0 370 2 3 987 643 274 25 35 chr17 52767325 52767522 -42505129 + B3A SINE B2 2 196 -2 3 987 480 99 0 0 chr17 52769605 52769676 -42502975 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 987 277 306 41 88 chr17 52769902 52769962 -42502689 - ID_B1 SINE B4 -3 221 82 3 987 299 271 81 23 chr17 52769962 52770049 -42502602 - PB1D7 SINE Alu -28 92 1 3 987 666 302 141 19 chr17 52770536 52770897 -42501754 + MER82 DNA MER2_type 150 554 -99 3 987 1116 221 79 65 chr17 52773490 52773927 -42498724 - Lx9 LINE L1 -1641 6003 5508 3 987 318 202 61 88 chr17 52773943 52774057 -42498594 - Lx9 LINE L1 -437 5410 5300 3 987 1250 237 18 53 chr17 52774072 52774194 -42498457 - Lx9 LINE L1 -629 5218 5096 3 987 253 0 54 0 chr17 52774194 52774231 -42498420 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 987 1250 237 18 53 chr17 52774231 52774504 -42498147 - Lx9 LINE L1 -752 5095 4837 3 987 223 26 50 25 chr17 52774509 52774549 -42498102 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 3 987 2856 228 67 8 chr17 52774598 52775340 -42497311 + Lx9 LINE L1 6322 7107 -537 3 987 767 204 201 15 chr17 52775381 52775654 -42496997 + Lx9 LINE L1 7241 7564 -80 3 987 21 0 0 0 chr17 52775752 52775773 -42496878 + AT_rich Low_complexity Low_complexity 1 21 0 3 987 235 212 161 12 chr17 52775881 52775962 -42496689 + PB1 SINE Alu 28 120 -7 3 987 21 36 0 0 chr17 52776054 52776082 -42496569 + AT_rich Low_complexity Low_complexity 1 28 0 3 987 24 0 0 0 chr17 52777307 52777331 -42495320 + AT_rich Low_complexity Low_complexity 1 24 0 3 987 246 179 0 0 chr17 52777608 52777664 -42494987 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 987 257 232 42 42 chr17 52778710 52778782 -42493869 - ID4 SINE ID -11 72 1 3 987 7120 77 3 4 chr17 52779001 52780447 -42492204 - L1_Mus2 LINE L1 0 6566 5121 3 987 284 285 62 7 chr17 52780518 52780663 -42491988 - L1MB8 LINE L1 -216 5962 5810 3 987 351 0 0 0 chr17 52780777 52780816 -42491835 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 987 376 352 92 0 chr17 52780820 52780962 -42491689 - RSINE1 SINE B4 -6 159 5 3 987 444 304 35 6 chr17 52781088 52781257 -42491394 - L1MB8 LINE L1 -597 5581 5408 3 987 716 319 45 99 chr17 52781915 52781998 -42490653 - Tigger11a DNA MER2_type -76 659 585 3 987 395 0 0 0 chr17 52781998 52782049 -42490602 + L1Md_F3 LINE L1 6520 6570 -14 3 987 716 319 45 99 chr17 52782049 52782540 -42490111 - Tigger11a DNA MER2_type -151 584 117 3 987 307 288 51 45 chr17 52782540 52782718 -42489933 - LTR37A LTR ERV1 0 426 248 3 987 1082 219 54 32 chr17 52782776 52783055 -42489596 + Lx9 LINE L1 6975 7259 -385 3 987 670 180 165 0 chr17 52783071 52783277 -42489374 + Lx9 LINE L1 7405 7644 0 3 987 498 17 0 0 chr17 52783814 52783873 -42488778 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 987 3575 86 12 14 chr17 52784137 52784644 -42488007 + L1_Mus3 LINE L1 6132 6637 -1 3 987 1202 100 0 6 chr17 52784654 52784835 -42487816 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 3 987 450 0 0 0 chr17 52784837 52784887 -42487764 + (GAAAA)n Simple_repeat Simple_repeat 1 50 0 3 987 3151 52 9 9 chr17 52786936 52786969 -42485682 - L1_Mus1 LINE L1 0 6567 6538 3 987 5690 38 19 0 chr17 52786969 52787660 -42484991 - L1Md_F2 LINE L1 0 6582 5879 3 987 3151 52 9 9 chr17 52787660 52788053 -42484598 - L1_Mus1 LINE L1 -30 6537 6141 3 987 22 56 0 0 chr17 52788123 52788159 -42484492 + AT_rich Low_complexity Low_complexity 1 36 0 3 987 780 285 14 10 chr17 52788582 52788791 -42483860 + B3 SINE B2 2 211 -5 3 987 1267 275 50 78 chr17 52788967 52789507 -42483144 + RMER5 LTR ERV1 1 525 -9 4 987 5044 156 72 8 chr17 52789525 52790422 -42482229 - Lx4A LINE L1 -1 7057 6103 4 987 590 138 8 0 chr17 52791272 52791395 -42481256 + (TCTA)n Simple_repeat Simple_repeat 1 124 0 4 987 593 310 24 47 chr17 52791433 52791731 -42480920 - B4A SINE B4 0 292 2 4 987 492 32 0 0 chr17 52792032 52792094 -42480557 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 987 270 106 0 0 chr17 52792094 52792141 -42480510 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 987 540 153 0 82 chr17 52792255 52792390 -42480261 - L1Md_F2 LINE L1 0 6582 6459 4 987 1630 230 61 2 chr17 52792423 52792819 -42479832 - MTD LTR MaLR 0 419 1 4 987 1156 50 0 0 chr17 52792870 52793009 -42479642 + B1_Mus1 SINE Alu 2 140 -8 4 987 834 299 94 35 chr17 52793095 52793414 -42479237 + ORR1E LTR MaLR 12 349 -10 4 987 249 109 0 0 chr17 52794178 52794224 -42478427 + (T)n Simple_repeat Simple_repeat 1 46 0 4 987 205 208 0 40 chr17 52794642 52794692 -42477959 + GA-rich Low_complexity Low_complexity 1 48 0 4 987 22 70 0 0 chr17 52794869 52794912 -42477739 + AT_rich Low_complexity Low_complexity 1 43 0 4 987 297 0 0 0 chr17 52794941 52794974 -42477677 + (TCTA)n Simple_repeat Simple_repeat 4 36 0 4 987 1589 42 0 0 chr17 52796625 52796814 -42475837 - B2_Mm1t SINE B2 -4 189 1 4 987 3751 59 0 0 chr17 52796814 52797314 -42475337 + L1Md_F2 LINE L1 6110 6582 0 4 987 339 85 0 0 chr17 52797444 52797491 -42475160 + (TTA)n Simple_repeat Simple_repeat 2 48 0 4 987 321 297 40 114 chr17 52797510 52797685 -42474966 - B4A SINE B4 -130 162 1 4 987 777 220 44 95 chr17 52798326 52798644 -42474007 - ORR1B1 LTR MaLR -126 268 41 4 987 342 0 0 0 chr17 52798644 52798682 -42473969 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 987 792 282 0 16 chr17 52798682 52798873 -42473778 - B3 SINE B2 -27 189 2 4 987 447 296 72 43 chr17 52800040 52800248 -42472403 + LTR37A LTR ERV1 175 388 -38 4 987 622 225 180 0 chr17 52800849 52801027 -42471624 + B3 SINE B2 1 210 -6 4 987 252 321 93 1 chr17 52801144 52801256 -42471395 + MIR SINE MIR 18 138 -70 4 987 732 269 11 0 chr17 52802010 52802196 -42470455 + B3A SINE B2 1 188 -10 4 987 201 242 0 0 chr17 52803272 52803334 -42469317 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 987 28 0 0 0 chr17 52804077 52804105 -42468546 + AT_rich Low_complexity Low_complexity 1 28 0 4 987 7323 66 2 7 chr17 52804968 52806023 -42466628 + L1_Mus1 LINE L1 5488 6542 -25 4 987 6353 44 10 5 chr17 52806023 52806820 -42465831 + L1Md_F2 LINE L1 5782 6582 0 4 987 7323 60 2 8 chr17 52806820 52806850 -42465801 + L1_Mus1 LINE L1 6543 6567 0 4 987 22 35 0 0 chr17 52806853 52806882 -42465769 + AT_rich Low_complexity Low_complexity 1 29 0 4 987 533 315 107 40 chr17 52807056 52807403 -42465248 + BLACKJACK DNA AcHobo 2 371 -2573 4 987 1882 251 37 40 chr17 52807564 52808219 -42464432 + L1VL4 LINE L1 33 685 -5617 4 987 8743 146 5 1 chr17 52808207 52809747 -42462904 + L1_Mm LINE L1 3000 4546 -1337 4 987 413 327 36 6 chr17 52809747 52809778 -42462873 + BLACKJACK DNA AcHobo 780 813 -2131 4 987 1022 137 27 5 chr17 52809778 52809962 -42462689 + L1_Mus3 LINE L1 6442 6629 -9 4 987 413 327 36 6 chr17 52809962 52810096 -42462555 + BLACKJACK DNA AcHobo 814 949 -1995 4 987 572 272 44 27 chr17 52810139 52810335 -42462316 + B3A SINE B2 9 205 -11 4 987 578 291 96 39 chr17 52810373 52810906 -42461745 + BLACKJACK DNA AcHobo 1848 2449 -495 4 987 1100 218 0 0 chr17 52812818 52813043 -42459608 + URR1B DNA MER1_type 1 225 0 4 987 276 340 29 0 chr17 52813936 52814039 -42458612 + PB1D10 SINE Alu 3 108 -9 4 987 832 263 5 14 chr17 52814176 52814392 -42458259 - Lx6 LINE L1 -913 6547 6334 4 987 3652 241 39 22 chr17 52814388 52815313 -42457338 + Lx6 LINE L1 6517 7457 -3 4 987 210 71 0 0 chr17 52815772 52815800 -42456851 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 987 256 326 159 26 chr17 52817066 52817299 -42455352 + L2a LINE L2 2597 2860 -559 4 987 204 338 97 48 chr17 52817328 52817493 -42455158 + L2a LINE L2 2990 3162 -264 4 987 193 327 77 82 chr17 52817886 52818106 -42454545 - MIRb SINE MIR -8 260 42 4 987 447 204 0 0 chr17 52818293 52818386 -42454265 - Lx2B LINE L1 -359 6641 6549 4 987 1985 180 43 0 chr17 52818386 52818758 -42453893 + Lx2A1 LINE L1 6621 7008 0 4 987 672 274 58 93 chr17 52818769 52818974 -42453677 + B3A SINE B2 1 198 0 4 987 720 265 40 52 chr17 52819310 52819599 -42453052 - RLTR12B LTR ERVK -280 248 14 4 987 279 244 24 24 chr17 52819879 52819963 -42452688 + L1_Rod LINE L1 5507 5590 -257 4 987 291 281 12 15 chr17 52820077 52820175 -42452476 - PB1D10 SINE Alu -25 102 2 4 987 232 364 36 72 chr17 52820257 52820396 -42452255 + LTR16A1 LTR ERVL 64 197 -259 4 988 1103 119 6 0 chr17 52822621 52822797 -42449854 + (TTCTC)n Simple_repeat Simple_repeat 4 180 0 4 988 2065 127 0 9 chr17 52822824 52823141 -42449510 - Lx LINE L1 -7 6647 6334 4 988 276 290 10 10 chr17 52823173 52823274 -42449377 + Lx7 LINE L1 7219 7319 -377 4 988 330 338 62 0 chr17 52823511 52823656 -42448995 - MIR SINE MIR -3 259 106 4 988 472 45 0 0 chr17 52824204 52824271 -42448380 - B2_Mm1a SINE B2 0 193 127 4 988 1175 117 0 37 chr17 52824306 52824493 -42448158 - B2_Mm2 SINE B2 -14 181 2 4 988 303 28 0 0 chr17 52824563 52824599 -42448052 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 988 315 412 59 0 chr17 52824601 52824737 -42447914 - RSINE1 SINE B4 -19 146 3 4 988 8677 63 1 2 chr17 52824820 52826669 -42445982 - L1Md_F2 LINE L1 -12 6570 4725 4 988 584 294 161 50 chr17 52826988 52827349 -42445302 - MLT1C LTR MaLR -45 422 22 4 988 1543 236 52 23 chr17 52827824 52828211 -42444440 + MTD LTR MaLR 1 398 -21 4 988 1740 169 145 0 chr17 52828859 52829196 -42443455 + ORR1B1 LTR MaLR 1 386 -8 4 988 253 333 30 30 chr17 52829991 52830090 -42442561 + PB1D10 SINE Alu 13 111 -6 4 988 441 66 0 0 chr17 52830176 52830237 -42442414 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 988 454 278 157 133 chr17 52830789 52831134 -42441517 - ORR1E LTR MaLR -6 353 1 4 988 2643 330 72 65 chr17 52831134 52831293 -42441358 - MTEa-int LTR MaLR -53 1527 1372 4 988 435 19 0 0 chr17 52831293 52831345 -42441306 + (TAAAA)n Simple_repeat Simple_repeat 5 56 0 4 988 2643 330 72 65 chr17 52831345 52831487 -42441164 - MTEa-int LTR MaLR -209 1371 1262 4 988 3547 133 9 2 chr17 52831487 52832020 -42440631 + Lx4A LINE L1 6520 7056 -2 4 988 2643 330 72 65 chr17 52832020 52833229 -42439422 - MTEa-int LTR MaLR -319 1261 5 4 988 246 199 22 102 chr17 52833233 52833340 -42439311 - MTEa LTR MaLR 0 379 287 4 988 619 82 18 9 chr17 52833423 52833534 -42439117 + L1_Mus3 LINE L1 6520 6631 -7 4 988 23 33 0 0 chr17 52833562 52833592 -42439059 + AT_rich Low_complexity Low_complexity 1 30 0 4 988 276 324 29 0 chr17 52833648 52833750 -42438901 - ORR1E LTR MaLR -254 105 1 4 988 459 0 0 0 chr17 52833779 52833830 -42438821 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 988 23 33 0 0 chr17 52833941 52833971 -42438680 + AT_rich Low_complexity Low_complexity 1 30 0 4 988 686 180 0 7 chr17 52834831 52834971 -42437680 + CT-rich Low_complexity Low_complexity 3 141 0 4 988 303 203 0 0 chr17 52834996 52835070 -42437581 + CT-rich Low_complexity Low_complexity 3 76 0 4 988 241 296 86 60 chr17 52835521 52835672 -42436979 - MIR3 SINE MIR -6 202 48 4 988 501 297 0 17 chr17 52837171 52837291 -42435360 + RSINE1 SINE B4 8 125 -40 4 988 561 136 0 0 chr17 52837291 52837394 -42435257 + (TC)n Simple_repeat Simple_repeat 2 104 0 4 988 252 0 0 0 chr17 52837394 52837422 -42435229 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 988 227 317 0 137 chr17 52837700 52837732 -42434919 + B4A SINE B4 64 82 -210 4 988 462 278 8 20 chr17 52837732 52837861 -42434790 + PB1 SINE Alu 1 123 -4 4 988 1119 302 57 13 chr17 52840692 52841064 -42431587 - MTD LTR MaLR -14 405 18 4 988 295 127 32 0 chr17 52841114 52841177 -42431474 + GA-rich Low_complexity Low_complexity 3 67 0 4 988 914 206 52 21 chr17 52842941 52843229 -42429422 - Lx4A LINE L1 -8 7050 6529 4 988 2871 150 45 19 chr17 52843225 52843867 -42428784 - Lx4A LINE L1 -340 6718 5995 4 988 1084 211 86 9 chr17 52843928 52844148 -42428503 + RLTR26 LTR ERVK 406 642 0 4 988 243 243 13 26 chr17 52844274 52844350 -42428301 + (TATATG)n Simple_repeat Simple_repeat 6 80 0 4 988 243 329 238 17 chr17 52844369 52844607 -42428044 - B4 SINE B4 0 292 3 4 988 5956 135 11 2 chr17 52844668 52845580 -42427071 - Lx2 LINE L1 0 6997 6078 4 988 299 130 0 0 chr17 52845580 52845626 -42427025 + Lx LINE L1 5605 5650 -1004 4 988 231 235 367 0 chr17 52846057 52846155 -42426496 - MTEa LTR MaLR 0 379 246 4 988 620 333 102 20 chr17 52846240 52846494 -42426157 + B4A SINE B4 3 277 -15 4 988 293 320 122 50 chr17 52846880 52847170 -42425481 - MLT1L LTR MaLR -4 606 225 4 988 24 0 0 0 chr17 52847400 52847424 -42425227 + AT_rich Low_complexity Low_complexity 1 24 0 4 988 401 299 105 42 chr17 52848116 52848259 -42424392 - RSINE1 SINE B4 -12 153 2 4 988 456 19 0 0 chr17 52848794 52848847 -42423804 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 988 24 53 0 0 chr17 52849034 52849072 -42423579 + AT_rich Low_complexity Low_complexity 1 38 0 4 988 23 33 0 0 chr17 52849555 52849585 -42423066 + AT_rich Low_complexity Low_complexity 1 30 0 4 988 562 303 147 18 chr17 52849757 52850137 -42422514 - Lx9 LINE L1 -158 7486 7058 4 988 4009 131 96 10 chr17 52850162 52850985 -42421666 - Lx LINE L1 -3 6651 5724 4 988 639 296 57 33 chr17 52850986 52851196 -42421455 - B3A SINE B2 -1 215 1 4 988 608 286 27 62 chr17 52851220 52851444 -42421207 - B3 SINE B2 0 216 1 4 988 384 288 25 33 chr17 52853161 52853283 -42419368 - MTEb LTR MaLR -11 368 248 4 988 350 345 80 20 chr17 52853335 52853486 -42419165 - MTEb LTR MaLR -165 194 35 4 988 610 288 86 30 chr17 52853682 52853879 -42418772 - B3 SINE B2 -6 210 3 4 988 746 251 21 31 chr17 52854101 52854294 -42418357 - B3 SINE B2 -25 191 1 5 988 231 283 0 0 chr17 52854651 52854704 -42417947 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 988 342 277 107 16 chr17 52854704 52854825 -42417826 - B4A SINE B4 0 292 161 5 988 1005 211 24 14 chr17 52854912 52855123 -42417528 - B3 SINE B2 0 216 4 5 988 28 61 0 0 chr17 52855126 52855175 -42417476 + AT_rich Low_complexity Low_complexity 1 49 0 5 988 7909 43 2 7 chr17 52855326 52856973 -42415678 - L1Md_F2 LINE L1 -1 6581 4940 5 988 377 293 43 80 chr17 52857083 52857246 -42415405 - RSINE1 SINE B4 -4 161 5 5 988 927 291 5 0 chr17 52858059 52858265 -42414386 - ID_B1 SINE B4 0 224 18 5 988 814 268 78 17 chr17 52858276 52858508 -42414143 - MTEb LTR MaLR -6 373 128 5 988 421 247 0 12 chr17 52858832 52858918 -42413733 - MTEb LTR MaLR -253 126 42 5 988 4763 149 26 7 chr17 52859569 52860333 -42412318 + Lx2B LINE L1 6212 6990 -10 5 988 279 286 140 49 chr17 52860810 52861075 -42411576 + B4A SINE B4 4 292 0 5 988 306 0 0 0 chr17 52861107 52861141 -42411510 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 988 515 277 21 19 chr17 52862452 52862667 -42409984 + MTD LTR MaLR 217 407 -14 5 988 201 284 12 24 chr17 52864224 52864307 -42408344 + (TATATG)n Simple_repeat Simple_repeat 6 87 0 5 988 234 0 0 0 chr17 52864898 52864924 -42407727 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 5 988 490 256 98 39 chr17 52866269 52866472 -42406179 + MLT1B LTR MaLR 4 218 -172 5 988 240 35 0 0 chr17 52866844 52866873 -42405778 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 988 431 291 127 63 chr17 52866890 52867143 -42405508 - LTR89 LTR ERVL? -582 297 29 5 988 698 307 38 48 chr17 52868556 52868847 -42403804 - MLT1C LTR MaLR -29 438 151 5 988 458 355 26 0 chr17 52868862 52869017 -42403634 - RSINE1 SINE B4 -4 161 3 5 988 294 273 65 65 chr17 52869017 52869163 -42403488 - MLT1C LTR MaLR -211 179 34 5 988 416 261 0 0 chr17 52869347 52869458 -42403193 - L1M3 LINE L1 -1588 4552 4442 5 988 241 342 48 71 chr17 52869854 52869980 -42402671 + LTR88b LTR Gypsy? 5 127 -710 5 988 690 47 0 0 chr17 52871012 52871098 -42401553 + (CATATA)n Simple_repeat Simple_repeat 2 87 0 5 988 32696 99 21 17 chr17 52871098 52877429 -42395222 - L1Md_F2 LINE L1 -16 6566 218 5 988 200 283 0 32 chr17 52877651 52877713 -42394938 + GA-rich Low_complexity Low_complexity 6 65 0 5 988 2967 335 44 36 chr17 52877990 52880019 -42392632 - RodERV21-int LTR ERV1 -105 4886 2843 5 988 1283 172 116 19 chr17 52880263 52880530 -42392121 - ORR1B1 LTR MaLR -61 333 41 5 988 1462 278 56 19 chr17 52880587 52881107 -42391544 + Lx3C LINE L1 6427 6965 -11 5 988 1143 274 78 18 chr17 52881629 52881963 -42390688 + ORR1E LTR MaLR 1 354 -5 5 988 3444 23 5 0 chr17 52882731 52883125 -42389526 + MTA_Mm LTR MaLR 1 396 0 5 988 542 317 68 0 chr17 52883585 52883806 -42388845 - Lx8 LINE L1 -148 7325 7090 5 988 527 345 61 14 chr17 52884368 52884580 -42388071 + MER58A DNA MER1_type 1 222 -2 5 988 204 163 23 23 chr17 52887017 52887061 -42385590 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 988 230 170 0 130 chr17 52887068 52887122 -42385529 - Lx5 LINE L1 -520 6530 6484 5 988 2294 230 51 26 chr17 52887132 52888076 -42384575 - Lx5 LINE L1 -695 6355 5352 5 988 276 30 0 0 chr17 52888093 52888126 -42384525 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 5 988 256 252 40 0 chr17 52888135 52888234 -42384417 - Lx7 LINE L1 -17 7679 7577 5 988 5240 154 55 15 chr17 52888267 52889124 -42383527 - Lx LINE L1 -112 6542 5648 5 988 513 0 0 0 chr17 52889124 52889181 -42383470 + (TC)n Simple_repeat Simple_repeat 1 57 0 5 988 5240 156 84 4 chr17 52889181 52889578 -42383073 - Lx LINE L1 -236 5647 5248 5 988 251 286 30 0 chr17 52889597 52889678 -42382973 + RMER13B LTR ERVK 1 76 -832 5 988 631 132 35 0 chr17 52889693 52889807 -42382844 - L1_Mur3 LINE L1 -1110 4770 4653 5 988 466 308 15 0 chr17 52890262 52890395 -42382256 - ORR1E LTR MaLR -219 140 6 5 988 253 79 24 73 chr17 52891511 52891593 -42381058 + (CAAA)n Simple_repeat Simple_repeat 3 80 0 5 988 502 316 52 35 chr17 52891768 52891942 -42380709 - ORR1E LTR MaLR -168 191 15 5 988 943 249 152 42 chr17 52891954 52892243 -42380408 - ORR1C2 LTR MaLR -61 323 3 5 988 21 57 0 0 chr17 52892248 52892283 -42380368 + AT_rich Low_complexity Low_complexity 1 35 0 5 988 297 0 0 0 chr17 52894152 52894185 -42378466 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 988 32 57 0 0 chr17 52894605 52894658 -42377993 + AT_rich Low_complexity Low_complexity 1 53 0 5 988 246 364 6 62 chr17 52895672 52895833 -42376818 - RMER4A LTR ERVK -290 176 25 5 988 288 0 0 0 chr17 52896384 52896416 -42376235 + (T)n Simple_repeat Simple_repeat 1 32 0 5 988 3453 154 71 3 chr17 52896909 52897515 -42375136 - Lx2A1 LINE L1 -1 7007 6361 5 988 572 0 15 0 chr17 52897515 52897583 -42375068 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 5 988 317 190 0 25 chr17 52897583 52897664 -42374987 + (CATA)n Simple_repeat Simple_repeat 1 79 0 5 988 1807 156 102 3 chr17 52898171 52898505 -42374146 + ORR1B2 LTR MaLR 1 367 0 5 988 587 149 0 26 chr17 52900661 52900778 -42371873 + (TA)n Simple_repeat Simple_repeat 2 115 0 5 988 258 179 18 70 chr17 52900815 52900929 -42371722 + (TATAA)n Simple_repeat Simple_repeat 1 108 0 5 988 660 250 35 92 chr17 52901298 52901527 -42371124 + B3 SINE B2 1 216 0 5 988 807 310 40 35 chr17 52901681 52901994 -42370657 - RMER1A Other Other -528 538 168 5 988 322 314 64 0 chr17 52902480 52902620 -42370031 - Lx7 LINE L1 -374 7322 7174 5 988 798 262 28 0 chr17 52902700 52902914 -42369737 - Lx6 LINE L1 -179 7281 7062 5 988 252 302 75 9 chr17 52902918 52903025 -42369626 - MTD LTR MaLR -288 131 18 5 988 405 0 0 0 chr17 52903098 52903143 -42369508 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 988 23 0 0 0 chr17 52904067 52904090 -42368561 + AT_rich Low_complexity Low_complexity 1 23 0 5 988 228 253 36 48 chr17 52904123 52904206 -42368445 + PB1D10 SINE Alu 13 94 -23 5 988 752 249 5 84 chr17 52904397 52904612 -42368039 - B3A SINE B2 0 198 1 5 988 304 342 34 0 chr17 52904623 52904740 -42367911 + B1F1 SINE Alu 23 143 -6 5 988 369 125 0 30 chr17 52905014 52905080 -42367571 - MTD LTR MaLR -2 419 356 5 988 702 157 0 0 chr17 52905275 52905434 -42367217 + (TG)n Simple_repeat Simple_repeat 2 160 0 5 988 202 268 0 0 chr17 52905466 52905522 -42367129 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 988 7615 72 5 1 chr17 52906381 52907434 -42365217 - L1_Mus2 LINE L1 0 6566 5509 5 988 998 230 24 164 chr17 52907583 52908046 -42364605 + RMER10B LTR ERVL 1 398 0 5 988 459 0 0 0 chr17 52908115 52908166 -42364485 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 988 1071 304 54 3 chr17 52908282 52908595 -42364056 - MTD LTR MaLR -73 346 18 5 988 501 324 106 32 chr17 52909935 52910181 -42362470 - B4A SINE B4 0 292 29 5 988 188 378 60 45 chr17 52910211 52910344 -42362307 - MIRc SINE MIR -124 144 10 5 988 540 87 11 21 chr17 52912037 52912131 -42360520 + (TA)n Simple_repeat Simple_repeat 1 93 0 5 988 236 77 26 0 chr17 52912131 52912170 -42360481 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 988 849 140 0 0 chr17 52912306 52912456 -42360195 + (TA)n Simple_repeat Simple_repeat 2 151 0 5 988 290 178 33 11 chr17 52912456 52912547 -42360104 + (TG)n Simple_repeat Simple_repeat 2 94 0 5 988 10636 24 1 0 chr17 52912837 52914759 -42357892 - L1Md_T LINE L1 0 6582 4659 5 988 2402 190 84 16 chr17 52914828 52915373 -42357278 + RMER4B LTR ERVK 4 585 0 5 988 1158 255 35 31 chr17 52915651 52915986 -42356665 - RMER19C LTR ERVK -41 861 277 5 988 228 296 11 69 chr17 52916968 52917055 -42355596 - MER20 DNA MER1_type -137 82 1 5 988 23 54 0 0 chr17 52917984 52918021 -42354630 + AT_rich Low_complexity Low_complexity 1 37 0 5 988 317 295 223 6 chr17 52918618 52918775 -42353876 - MLT1H2 LTR MaLR 0 489 299 5 988 186 133 0 0 chr17 52918973 52919003 -42353648 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 5 988 3053 73 2 33 chr17 52919889 52920313 -42352338 + L1_Mus2 LINE L1 6156 6566 0 5 988 24 0 0 0 chr17 52921213 52921237 -42351414 + AT_rich Low_complexity Low_complexity 1 24 0 5 988 240 259 67 33 chr17 52921237 52921357 -42351294 + Lx7 LINE L1 5704 5827 -1869 5 988 2433 203 89 13 chr17 52921365 52921980 -42350671 - L1_Mur3 LINE L1 -1289 4591 3930 5 988 4120 227 51 36 chr17 52921980 52923045 -42349606 + Lx7 LINE L1 6616 7696 0 5 988 23 0 0 0 chr17 52923144 52923167 -42349484 + AT_rich Low_complexity Low_complexity 1 23 0 5 988 420 300 125 55 chr17 52923199 52923471 -42349180 - B4A SINE B4 0 292 2 5 988 657 96 0 0 chr17 52924494 52924588 -42348063 + (TA)n Simple_repeat Simple_repeat 2 95 0 5 988 21 0 0 0 chr17 52924844 52924865 -42347786 + AT_rich Low_complexity Low_complexity 1 21 0 5 988 825 11 0 0 chr17 52926328 52926422 -42346229 + (GAAA)n Simple_repeat Simple_repeat 3 96 0 5 988 432 55 0 0 chr17 52927756 52927811 -42344840 + (TCC)n Simple_repeat Simple_repeat 3 57 0 5 988 226 0 59 0 chr17 52927807 52927841 -42344810 + (TTTC)n Simple_repeat Simple_repeat 4 39 0 5 988 261 119 0 23 chr17 52927996 52928039 -42344612 - ID_B1 SINE B4 -5 219 178 5 988 270 0 0 0 chr17 52928083 52928113 -42344538 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 5 988 263 294 77 34 chr17 52928407 52928675 -42343976 - L1MD1 LINE L1 -337 5905 5579 5 988 227 311 96 10 chr17 52928659 52928763 -42343888 + Lx8 LINE L1 7008 7120 -353 5 988 268 419 0 8 chr17 52929984 52930114 -42342537 - LTR16A LTR ERVL -245 206 78 5 988 405 234 83 136 chr17 52930233 52930461 -42342190 - B3 SINE B2 0 216 1 6 988 4100 72 29 9 chr17 52931144 52931705 -42340946 - L1Md_F2 LINE L1 -4 6578 6007 6 988 302 305 141 10 chr17 52931751 52931943 -42340708 - L1M2 LINE L1 -2237 3906 3690 6 988 207 0 0 0 chr17 52931943 52931966 -42340685 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 988 1073 214 4 22 chr17 52932338 52932567 -42340084 + URR1B DNA MER1_type 1 225 0 6 988 368 0 43 0 chr17 52934329 52934376 -42338275 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 6 988 332 209 60 20 chr17 52934376 52934527 -42338124 - RMER17B LTR ERVK -499 459 303 6 988 2658 294 45 41 chr17 52934730 52935602 -42337049 + Lx8 LINE L1 6432 7302 -171 6 988 2226 195 69 4 chr17 52935602 52936097 -42336554 + RLTR11A2 LTR ERVK 1 527 0 6 988 2658 294 45 41 chr17 52936097 52936233 -42336418 + Lx8 LINE L1 7303 7444 -29 6 988 321 26 0 0 chr17 52937965 52938003 -42334648 + (CGTG)n Simple_repeat Simple_repeat 1 38 0 6 988 2522 176 34 47 chr17 52938866 52939397 -42333254 + RLTR28 LTR ERVL 1 524 0 6 988 293 68 0 22 chr17 52940218 52940263 -42332388 + (TAA)n Simple_repeat Simple_repeat 2 45 0 6 988 827 226 79 20 chr17 52940346 52940549 -42332102 + B3 SINE B2 2 216 0 6 988 485 252 12 137 chr17 52941904 52942065 -42330586 + B3A SINE B2 3 143 -55 6 988 371 24 34 67 chr17 52944686 52944775 -42327876 + (TTTTG)n Simple_repeat Simple_repeat 2 87 0 6 988 301 292 30 48 chr17 52945157 52945296 -42327355 + PB1D9 SINE Alu 4 125 -23 6 988 781 108 29 44 chr17 52946405 52946541 -42326110 - MT2B LTR ERVL 0 601 468 6 988 342 273 36 72 chr17 52947458 52947596 -42325055 - MER34A LTR ERV1 -64 507 375 6 988 430 355 80 19 chr17 52947646 52947910 -42324741 - B4A SINE B4 -12 280 1 6 988 507 317 75 87 chr17 52947910 52948267 -42324384 - MER34A LTR ERV1 -184 387 6 6 988 205 51 25 25 chr17 52949715 52949755 -42322896 + (TAAAA)n Simple_repeat Simple_repeat 2 41 0 6 988 1242 133 126 79 chr17 52950009 52950286 -42322365 - RLTR23 LTR ERV1 0 430 141 6 988 368 20 0 20 chr17 52950744 52950794 -42321857 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 6 988 265 315 64 18 chr17 52951077 52951187 -42321464 - PB1D10 SINE Alu 0 117 3 6 988 22 0 0 0 chr17 52951545 52951567 -42321084 + AT_rich Low_complexity Low_complexity 1 22 0 6 988 305 332 101 63 chr17 52951579 52951817 -42320834 - L2a LINE L2 0 3426 3180 6 988 23 0 0 0 chr17 52952007 52952030 -42320621 + AT_rich Low_complexity Low_complexity 1 23 0 6 988 664 283 22 0 chr17 52952758 52952942 -42319709 - Lx6 LINE L1 -143 7317 7130 6 123 1138 172 23 64 chr17 52952968 52953341 -42319310 - L1_Mur3 LINE L1 -2395 3485 2981 6 989 1784 144 81 26 chr17 52953341 52953397 -42319254 - ORR1B2 LTR MaLR 0 367 313 6 989 252 0 0 0 chr17 52953397 52953425 -42319226 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 6 989 1919 121 7 3 chr17 52953425 52953723 -42318928 - Lx LINE L1 -10 6644 6346 6 989 1784 144 81 26 chr17 52953723 52954013 -42318638 - ORR1B2 LTR MaLR -55 312 2 6 989 7357 172 47 36 chr17 52954013 52955668 -42316983 - L1_Mur3 LINE L1 -2895 2985 1313 6 989 2432 288 102 35 chr17 52955851 52957138 -42315513 - RMER1A Other Other -189 841 3 6 989 1760 201 53 24 chr17 52957480 52957892 -42314759 - BGLII_B LTR ERVK -10 431 8 6 989 973 289 100 44 chr17 52958260 52958600 -42314051 - MTE2a LTR MaLR -9 370 12 6 989 952 87 0 44 chr17 52959782 52959962 -42312689 + (TCCCC)n Simple_repeat Simple_repeat 5 176 0 6 989 1716 178 141 29 chr17 52960164 52960485 -42312166 - ORR1B1 LTR MaLR -8 386 26 6 989 1211 43 12 6 chr17 52960485 52960648 -42312003 - L1Md_F2 LINE L1 0 6582 6419 6 989 1716 178 141 29 chr17 52960648 52960673 -42311978 - ORR1B1 LTR MaLR -369 25 1 6 989 22 0 0 0 chr17 52961390 52961412 -42311239 + AT_rich Low_complexity Low_complexity 1 22 0 6 989 374 185 12 0 chr17 52961952 52962033 -42310618 + (TA)n Simple_repeat Simple_repeat 1 82 0 6 989 1256 265 46 6 chr17 52962107 52962434 -42310217 - RMER5 LTR ERV1 0 534 195 6 989 3710 190 26 12 chr17 52962435 52962896 -42309755 - RLTR17 LTR ERVK 0 692 216 6 989 3729 58 19 2 chr17 52962896 52963363 -42309288 - MT2C_Mm LTR ERVL 0 475 1 6 989 3710 190 26 12 chr17 52963363 52963583 -42309068 - RLTR17 LTR ERVK -477 215 2 6 989 258 335 101 79 chr17 52963920 52964147 -42308504 - MLT1J1 LTR MaLR -137 307 76 6 989 355 295 97 15 chr17 52964540 52964674 -42307977 - RSINE1 SINE B4 -10 155 11 6 989 400 354 77 0 chr17 52966411 52966685 -42305966 + L1M5 LINE L1 4812 5106 -1040 6 989 237 267 35 0 chr17 52967108 52967194 -42305457 + (TATATG)n Simple_repeat Simple_repeat 2 90 0 6 989 241 296 14 0 chr17 52967867 52967938 -42304713 + MIR SINE MIR 191 262 0 6 989 359 257 173 29 chr17 52968287 52968391 -42304260 - B3 SINE B2 -74 119 1 6 989 1063 244 139 37 chr17 52969258 52969581 -42303070 + ORR1D2 LTR MaLR 1 356 -14 6 989 368 164 0 29 chr17 52969777 52969846 -42302805 + PB1D10 SINE Alu 51 117 0 6 989 1251 286 19 73 chr17 52969902 52970272 -42302379 - ORR1E LTR MaLR -9 350 1 6 989 299 282 47 0 chr17 52971733 52971818 -42300833 + 5S rRNA rRNA 2 90 -31 6 989 352 303 18 9 chr17 52971836 52971946 -42300705 - ORR1E LTR MaLR -214 145 35 6 989 387 0 0 0 chr17 52971966 52972009 -42300642 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 989 438 321 0 9 chr17 52972009 52972122 -42300529 - RSINE1 SINE B4 -25 140 29 6 989 27 62 0 0 chr17 52972408 52972456 -42300195 + AT_rich Low_complexity Low_complexity 1 48 0 6 989 207 98 73 0 chr17 52972498 52972539 -42300112 + (CATAT)n Simple_repeat Simple_repeat 4 47 0 6 989 622 76 41 32 chr17 52973657 52973780 -42298871 + (TTTCC)n Simple_repeat Simple_repeat 3 126 0 6 989 183 42 0 0 chr17 52976318 52976342 -42296309 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 6 989 221 271 35 92 chr17 52976795 52976937 -42295714 + B4A SINE B4 10 143 -149 6 989 269 242 11 0 chr17 52976947 52977038 -42295613 + GA-rich Low_complexity Low_complexity 5 96 0 6 989 187 95 71 0 chr17 52977165 52977207 -42295444 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 6 989 275 0 0 28 chr17 52979880 52979916 -42292735 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 989 747 278 32 159 chr17 52983798 52984231 -42288420 - MTE2a LTR MaLR -1 378 1 6 989 540 127 0 0 chr17 52984772 52984882 -42287769 + (TC)n Simple_repeat Simple_repeat 1 110 0 6 989 258 264 0 14 chr17 52985191 52985264 -42287387 + T-rich Low_complexity Low_complexity 1 72 0 6 989 690 220 8 0 chr17 52985268 52985400 -42287251 - B1_Mur4 SINE Alu -17 133 1 6 989 1927 137 20 0 chr17 52985603 52985909 -42286742 + Lx2 LINE L1 6680 6991 -6 6 989 1248 222 102 7 chr17 52985928 52986232 -42286419 + ORR1D1 LTR MaLR 42 374 0 6 989 536 270 12 36 chr17 52986232 52986397 -42286254 + B3A SINE B2 38 198 0 6 989 362 236 78 11 chr17 52986489 52986579 -42286072 - PB1D10 SINE Alu 0 117 22 6 989 303 96 0 0 chr17 52988619 52988671 -42283980 + (TC)n Simple_repeat Simple_repeat 1 52 0 6 989 1187 286 90 29 chr17 52988717 52988931 -42283720 - Lx7 LINE L1 -350 7346 7119 6 989 432 0 0 0 chr17 52988931 52988979 -42283672 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 989 1187 286 90 29 chr17 52988979 52989276 -42283375 - Lx7 LINE L1 -578 7118 6804 6 989 22 35 0 0 chr17 52989941 52989970 -42282681 + AT_rich Low_complexity Low_complexity 1 29 0 6 989 249 343 0 18 chr17 52990101 52990211 -42282440 + RMER21B LTR ERV1 86 193 -649 6 989 459 230 276 0 chr17 52990231 52990278 -42282373 + RMER21B LTR ERV1 347 408 -434 6 989 411 21 0 0 chr17 52990278 52990326 -42282325 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 989 459 230 276 0 chr17 52990326 52990452 -42282199 + RMER21B LTR ERV1 409 567 -275 6 989 518 275 8 0 chr17 52992337 52992457 -42280194 - RSINE1 SINE B4 -43 122 2 6 989 688 220 0 7 chr17 52992486 52992628 -42280023 + Lx9 LINE L1 7338 7478 -166 6 989 219 69 0 0 chr17 52992628 52992657 -42279994 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 989 249 252 16 98 chr17 52992670 52992793 -42279858 + Lx9 LINE L1 7532 7644 0 6 989 21 36 0 0 chr17 52993616 52993644 -42279007 + AT_rich Low_complexity Low_complexity 1 28 0 6 989 298 292 0 0 chr17 52993719 52993784 -42278867 + RSINE1 SINE B4 6 70 -95 6 989 1256 265 36 0 chr17 52994812 52995118 -42277533 - ORR1D2 LTR MaLR -2 368 52 6 989 303 364 48 48 chr17 52995390 52995618 -42277033 - L1MEd LINE L1 -5358 761 534 6 989 609 90 0 0 chr17 52995988 52996077 -42276574 + (CA)n Simple_repeat Simple_repeat 1 89 0 6 989 498 75 0 0 chr17 52996531 52996598 -42276053 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 989 219 103 0 0 chr17 52996772 52996811 -42275840 + (A)n Simple_repeat Simple_repeat 1 39 0 6 989 237 33 0 0 chr17 52998027 52998057 -42274594 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 6 989 413 196 146 10 chr17 52998987 52999090 -42273561 - PB1D10 SINE Alu 0 117 1 6 989 21 36 0 0 chr17 52999126 52999154 -42273497 + AT_rich Low_complexity Low_complexity 1 28 0 6 989 26 50 0 0 chr17 52999437 52999477 -42273174 + AT_rich Low_complexity Low_complexity 1 40 0 6 989 612 0 0 0 chr17 53000265 53000333 -42272318 + (TC)n Simple_repeat Simple_repeat 1 68 0 1 989 320 298 112 17 chr17 53001187 53001303 -42271348 - RMER15 LTR ERVL -78 497 371 2 989 811 87 8 8 chr17 53001335 53001462 -42271189 + (TA)n Simple_repeat Simple_repeat 2 128 0 3 989 251 336 18 26 chr17 53001464 53001577 -42271074 - Lx8 LINE L1 -303 7170 7059 4 989 980 278 50 84 chr17 53002477 53002582 -42270069 + MTE2a LTR MaLR 6 109 -270 5 989 778 147 277 0 chr17 53002582 53002759 -42269892 - URR1A DNA MER1_type 0 226 1 6 989 980 278 50 84 chr17 53002759 53003034 -42269617 + MTE2a LTR MaLR 110 373 -6 5 989 381 22 0 0 chr17 53004743 53004789 -42267862 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 989 255 287 43 72 chr17 53004993 53005132 -42267519 - MIRb SINE MIR -33 235 101 8 989 495 96 0 0 chr17 53006450 53006533 -42266118 + (TG)n Simple_repeat Simple_repeat 1 83 0 9 989 591 231 196 0 chr17 53006574 53006783 -42265868 - MTEb LTR MaLR -2 377 128 1 989 326 282 50 17 chr17 53007946 53008065 -42264586 + L1MD3 LINE L1 7796 7918 -77 1 989 564 269 15 0 chr17 53008115 53008249 -42264402 - B1F2 SINE Alu -9 140 5 1 989 772 55 18 0 chr17 53008388 53008498 -42264153 + (TAGA)n Simple_repeat Simple_repeat 2 113 0 1 989 1461 238 170 45 chr17 53008523 53009122 -42263529 - Lx7 LINE L1 0 7696 7023 1 989 4110 35 2 4 chr17 53009198 53009691 -42262960 - L1Md_F3 LINE L1 0 6584 6093 1 989 588 14 0 0 chr17 53009729 53009798 -42262853 + (GA)n Simple_repeat Simple_repeat 2 70 0 1 989 350 198 12 0 chr17 53010190 53010271 -42262380 - Lx5 LINE L1 -3 7047 6966 1 989 318 236 38 85 chr17 53010604 53010799 -42261852 + L1MA9 LINE L1 6086 6270 -42 1 989 289 339 8 31 chr17 53011344 53011472 -42261179 + LTR16C LTR ERVL 289 413 -76 1 989 218 324 157 0 chr17 53011480 53011582 -42261069 + MIRb SINE MIR 46 163 -105 2 989 8672 87 36 20 chr17 53013816 53015486 -42257165 - Lx3_Mus LINE L1 0 7009 5310 2 989 249 57 0 0 chr17 53015487 53015522 -42257129 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2 989 30 45 0 0 chr17 53015631 53015675 -42256976 + AT_rich Low_complexity Low_complexity 1 44 0 2 989 3135 166 60 21 chr17 53015756 53016384 -42256267 - Lx9 LINE L1 -153 7491 6839 2 989 231 206 72 14 chr17 53016800 53016869 -42255782 + ID4_ SINE ID 2 74 -9 2 989 547 283 33 0 chr17 53017997 53018149 -42254502 - RSINE1 SINE B4 -6 159 3 2 989 852 204 121 0 chr17 53018408 53018614 -42254037 + Lx3C LINE L1 6744 6974 -2 2 989 314 290 168 0 chr17 53018634 53018741 -42253910 + LTR50 LTR ERVL 75 199 -596 2 989 198 302 92 11 chr17 53019049 53019136 -42253515 - MIR SINE MIR -120 142 49 2 989 193 241 69 0 chr17 53020327 53020385 -42252266 - MIR SINE MIR -66 196 135 3 989 951 256 5 5 chr17 53020847 53021063 -42251588 + B3 SINE B2 1 216 0 3 989 622 337 128 46 chr17 53021285 53021888 -42250763 + L1ME3A LINE L1 4279 4930 -1216 3 989 616 296 0 0 chr17 53021891 53022026 -42250625 + RSINE1 SINE B4 30 164 -1 3 989 609 211 142 6 chr17 53022114 53022290 -42250361 - RMER1A Other Other 0 1030 831 3 989 1137 247 123 89 chr17 53022286 53022726 -42249925 - RMER1B Other Other -581 485 31 3 989 247 281 12 0 chr17 53023561 53023643 -42249008 + (TATATG)n Simple_repeat Simple_repeat 3 85 0 3 989 720 54 0 0 chr17 53023770 53023863 -42248788 + (GA)n Simple_repeat Simple_repeat 1 93 0 3 989 258 289 69 40 chr17 53023905 53024107 -42248544 + L1ME3A LINE L1 5743 5950 -223 3 989 741 23 0 0 chr17 53024276 53024363 -42248288 + (TC)n Simple_repeat Simple_repeat 2 88 0 3 989 1070 217 152 3 chr17 53025283 53025565 -42247086 + Lx5 LINE L1 6727 7050 0 3 989 641 153 8 0 chr17 53026021 53026145 -42246506 + (TA)n Simple_repeat Simple_repeat 1 125 0 3 989 233 29 29 0 chr17 53026631 53026665 -42245986 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 989 306 312 41 33 chr17 53027087 53027233 -42245418 - MIRb SINE MIR -117 151 2 4 989 366 23 0 0 chr17 53027433 53027476 -42245175 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 4 989 238 131 66 0 chr17 53028050 53028111 -42244540 + (TTG)n Simple_repeat Simple_repeat 1 65 0 4 989 10146 164 32 38 chr17 53028122 53031302 -42241349 - Lx3C LINE L1 -2 6974 3804 4 989 787 254 11 34 chr17 53031307 53031572 -42241079 - Lx3C LINE L1 -623 6353 6095 4 989 1206 140 36 13 chr17 53031581 53031806 -42240845 - Lx3C LINE L1 -2088 3798 3569 4 989 446 94 0 0 chr17 53031805 53031869 -42240782 + Lx3C LINE L1 3487 3550 -2327 4 989 871 305 74 117 chr17 53031922 53032316 -42240335 + MTE2a LTR MaLR 3 379 0 4 989 246 312 13 13 chr17 53032622 53032700 -42239951 - ID4 SINE ID -4 79 2 4 989 414 0 0 0 chr17 53032982 53033028 -42239623 + (TTA)n Simple_repeat Simple_repeat 1 46 0 4 989 23 0 0 0 chr17 53033584 53033607 -42239044 + AT_rich Low_complexity Low_complexity 1 23 0 4 989 1371 152 49 8 chr17 53033608 53033854 -42238797 - Lx3C LINE L1 -2 6974 6719 5 989 8609 151 22 14 chr17 53034131 53036947 -42235704 + Lx2 LINE L1 4146 6997 0 5 989 259 202 12 37 chr17 53037083 53037165 -42235486 + L1M1 LINE L1 5792 5871 -429 5 989 248 261 76 0 chr17 53037166 53037258 -42235393 + MLT1A0 LTR MaLR 261 359 -6 5 989 239 316 40 0 chr17 53039222 53039298 -42233353 + MLT1A0 LTR MaLR 21 99 -266 5 989 261 276 71 0 chr17 53039401 53039499 -42233152 + MLT1A0 LTR MaLR 255 359 -6 5 989 196 342 55 0 chr17 53040800 53040873 -42231778 - MIRc SINE MIR -98 170 94 5 989 357 24 0 0 chr17 53040878 53040920 -42231731 + (CAA)n Simple_repeat Simple_repeat 1 42 0 5 989 201 39 0 0 chr17 53041523 53041549 -42231102 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 5 989 836 200 54 27 chr17 53042823 53043008 -42229643 - B2_Mm2 SINE B2 -4 191 2 5 989 230 235 61 12 chr17 53045696 53045778 -42226873 - L1MA8 LINE L1 -19 6272 6187 5 989 6496 123 28 5 chr17 53045833 53047264 -42225387 - Lx LINE L1 -7 6647 5185 6 989 237 176 0 38 chr17 53047309 53047362 -42225289 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 989 343 260 105 9 chr17 53048953 53049058 -42223593 + PB1 SINE Alu 11 125 -2 6 989 229 333 25 37 chr17 53049066 53049147 -42223504 + ID4_ SINE ID 1 80 -3 6 989 180 262 15 76 chr17 53049337 53049403 -42223248 + L2 LINE L2 2429 2490 -929 6 989 407 302 0 87 chr17 53049525 53049652 -42222999 - B4A SINE B4 -6 286 171 6 989 341 340 109 54 chr17 53049861 53050247 -42222404 - L1M5 LINE L1 -990 5156 4750 6 989 757 56 9 9 chr17 53050508 53050616 -42222035 + (TC)n Simple_repeat Simple_repeat 2 109 0 6 989 1600 268 67 3 chr17 53050654 53051040 -42221611 + MTD LTR MaLR 1 411 -8 6 989 1192 246 38 9 chr17 53051278 53051598 -42221053 + Lx9 LINE L1 7018 7346 -298 6 989 571 146 0 0 chr17 53051601 53051683 -42220968 + BC1_Mm scRNA scRNA 1 82 -70 7 989 971 80 0 7 chr17 53051685 53051824 -42220827 + (GAAAA)n Simple_repeat Simple_repeat 4 141 0 7 989 282 237 155 0 chr17 53051892 53051989 -42220662 + PB1D7 SINE Alu 1 112 -8 7 989 337 279 25 86 chr17 53052013 53052256 -42220395 + L1ME1 LINE L1 5866 6093 -86 7 989 786 211 0 0 chr17 53052265 53052445 -42220206 + (TA)n Simple_repeat Simple_repeat 1 180 0 7 989 477 0 0 0 chr17 53052570 53052623 -42220028 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 989 487 314 130 27 chr17 53053677 53053978 -42218673 + Lx8 LINE L1 6951 7282 -191 7 989 342 0 0 0 chr17 53054026 53054064 -42218587 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 989 513 47 0 0 chr17 53054322 53054386 -42218265 + (TCTA)n Simple_repeat Simple_repeat 3 66 0 7 989 249 163 0 0 chr17 53054388 53054437 -42218214 + (TATG)n Simple_repeat Simple_repeat 2 50 0 7 989 654 321 101 11 chr17 53054490 53054758 -42217893 - B4 SINE B4 0 292 1 8 989 350 320 128 0 chr17 53055745 53055870 -42216781 - RSINE1 SINE B4 -14 151 11 8 989 467 45 0 15 chr17 53056293 53056360 -42216291 + (CA)n Simple_repeat Simple_repeat 1 66 0 8 989 596 336 76 67 chr17 53057926 53058270 -42214381 - ORR1E LTR MaLR -5 354 8 8 989 280 300 16 98 chr17 53058279 53058401 -42214250 - MIRb SINE MIR -123 145 34 8 989 288 0 0 0 chr17 53061189 53061221 -42211430 + (CA)n Simple_repeat Simple_repeat 2 33 0 8 989 7446 118 13 2 chr17 53061345 53063353 -42209298 - L1_Mus4 LINE L1 -5 6631 4601 8 989 31399 29 3 0 chr17 53063354 53067958 -42204693 - L1Md_T LINE L1 0 6582 1968 8 989 12634 160 142 11 chr17 53067946 53071549 -42201102 - L1_Mus4 LINE L1 -1270 4613 539 8 989 655 221 29 60 chr17 53071636 53071834 -42200817 - MTE2a LTR MaLR -2 377 171 8 989 655 175 0 48 chr17 53073425 53073551 -42199100 - PB1D9 SINE Alu 0 120 1 8 989 2526 75 0 3 chr17 53073716 53074051 -42198600 + L1Md_F2 LINE L1 6247 6580 -2 9 989 243 88 0 0 chr17 53074088 53074122 -42198529 + (A)n Simple_repeat Simple_repeat 1 34 0 9 989 554 0 15 0 chr17 53074436 53074502 -42198149 + (TC)n Simple_repeat Simple_repeat 1 67 0 9 989 765 259 112 139 chr17 53075647 53076149 -42196502 - RLTR12B LTR ERVK -30 498 11 9 989 371 310 74 12 chr17 53076621 53076957 -42195694 - L1_Rod LINE L1 -6301 871 515 9 989 1572 261 29 19 chr17 53078041 53078451 -42194200 - MTD LTR MaLR 0 419 6 9 989 1007 261 35 67 chr17 53078551 53078925 -42193726 - Lx8 LINE L1 0 7473 7112 9 989 258 105 0 0 chr17 53079255 53079293 -42193358 + (TATG)n Simple_repeat Simple_repeat 3 40 0 9 989 10399 38 16 0 chr17 53079685 53081035 -42191616 - L1_Mm LINE L1 -2048 3835 2464 9 989 3519 63 4 4 chr17 53081032 53081511 -42191140 + L1Md_F3 LINE L1 5108 5586 -297 9 989 8255 34 1 7 chr17 53081512 53082512 -42190139 + L1Md_F3 LINE L1 5588 6581 -3 9 989 25 0 0 0 chr17 53082533 53082558 -42190093 + AT_rich Low_complexity Low_complexity 1 25 0 1 989 2337 187 72 14 chr17 53082558 53083074 -42189577 - RLTR31_Mm LTR ERVK -15 546 1 1 989 23 54 0 0 chr17 53083731 53083768 -42188883 + AT_rich Low_complexity Low_complexity 1 37 0 1 989 656 159 60 169 chr17 53083986 53084110 -42188541 - RMER1C Other Other -1 1341 1224 1 123 1055 130 0 11 chr17 53084110 53084289 -42188362 + (GAAA)n Simple_repeat Simple_repeat 3 179 0 1 990 656 159 60 169 chr17 53084289 53084413 -42188238 - RMER1C Other Other -119 1223 1120 1 990 28295 34 0 0 chr17 53084490 53088066 -42184585 + L1Md_T LINE L1 2011 5586 -297 1 990 8972 7 0 0 chr17 53088066 53089062 -42183589 + L1Md_T LINE L1 5587 6582 0 1 990 202 281 18 0 chr17 53089786 53089843 -42182808 - MIR SINE MIR -73 135 78 1 990 202 311 54 0 chr17 53090274 53090348 -42182303 - L3 LINE CR1 -167 4322 4245 1 990 656 243 97 5 chr17 53090378 53090567 -42182084 - B3A SINE B2 -8 208 8 1 990 369 0 0 0 chr17 53091702 53091743 -42180908 + (T)n Simple_repeat Simple_repeat 1 41 0 1 990 35 24 0 0 chr17 53095022 53095064 -42177587 + AT_rich Low_complexity Low_complexity 1 42 0 1 990 23 33 0 0 chr17 53096117 53096147 -42176504 + AT_rich Low_complexity Low_complexity 1 30 0 1 990 706 298 22 0 chr17 53096196 53096374 -42176277 - B3A SINE B2 -16 182 1 1 990 450 0 0 0 chr17 53097561 53097611 -42175040 + (TTA)n Simple_repeat Simple_repeat 2 51 0 1 990 1230 41 0 0 chr17 53098865 53099012 -42173639 - B1_Mus2 SINE Alu 0 147 1 1 990 1026 122 0 0 chr17 53100279 53100427 -42172224 - B1_Mus1 SINE Alu 0 148 1 1 990 243 0 0 0 chr17 53100444 53100471 -42172180 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 1 990 436 281 0 9 chr17 53100801 53100916 -42171735 + PB1D10 SINE Alu 3 116 -1 1 990 442 308 81 19 chr17 53100988 53101296 -42171355 - L1MA8 LINE L1 -21 6270 5944 1 990 242 274 0 131 chr17 53101944 53102028 -42170623 + RMER15 LTR ERVL 371 443 -132 1 990 450 312 58 17 chr17 53102042 53102215 -42170436 + RMER15 LTR ERVL 396 575 0 1 990 507 227 17 0 chr17 53102695 53102814 -42169837 + Lx8 LINE L1 6977 7097 -376 1 990 802 287 88 35 chr17 53102830 53102969 -42169682 + Lx8 LINE L1 6742 6879 -594 1 990 3864 52 0 12 chr17 53102969 53103460 -42169191 + L1Md_F2 LINE L1 6098 6582 0 1 990 802 263 110 26 chr17 53103460 53103903 -42168748 + Lx8 LINE L1 6880 7467 -6 1 990 864 250 109 26 chr17 53103921 53104233 -42168418 + Lx8 LINE L1 7136 7473 0 1 990 331 262 127 10 chr17 53104251 53104448 -42168203 + L1MB7 LINE L1 4610 4829 -1317 1 990 243 316 81 117 chr17 53104448 53104559 -42168092 + PB1D7 SINE Alu 1 107 -13 1 990 746 301 95 26 chr17 53104580 53104916 -42167735 + MTEb LTR MaLR 1 372 -7 1 990 419 308 79 75 chr17 53104931 53105245 -42167406 + L1MB7 LINE L1 4837 5176 -970 1 990 1044 29 15 0 chr17 53105245 53105382 -42167269 + L1Md_T LINE L1 6442 6580 -2 1 990 419 308 79 75 chr17 53105382 53105612 -42167039 + L1MB7 LINE L1 5177 5383 -763 1 990 534 276 19 68 chr17 53106306 53106512 -42166139 - B3A SINE B2 -2 196 1 1 990 892 238 19 0 chr17 53107494 53107704 -42164947 - B3 SINE B2 -2 214 1 1 990 347 268 129 8 chr17 53108567 53108691 -42163960 + L1MB7 LINE L1 6038 6176 -8 1 990 184 295 141 0 chr17 53110432 53110510 -42162141 + MIRc SINE MIR 128 216 -52 1 990 1135 89 0 0 chr17 53111285 53111431 -42161220 - B1_Mm SINE Alu -1 146 1 1 990 382 252 84 53 chr17 53112435 53112661 -42159990 + MER33 DNA MER1_type 76 308 -16 1 990 486 0 0 0 chr17 53112734 53112788 -42159863 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 990 1067 134 6 0 chr17 53114014 53114193 -42158458 + (TCC)n Simple_repeat Simple_repeat 1 180 0 1 990 254 143 20 0 chr17 53114193 53114242 -42158409 + CT-rich Low_complexity Low_complexity 3 52 0 1 990 1465 11 0 17 chr17 53114243 53114424 -42158227 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 1 990 971 41 0 0 chr17 53114431 53114553 -42158098 - B1_Mm SINE Alu 0 147 26 1 990 202 189 0 0 chr17 53115017 53115054 -42157597 + CT-rich Low_complexity Low_complexity 1 37 0 1 990 742 305 87 70 chr17 53115649 53116287 -42156364 + RMER13A LTR ERVK 2 681 -227 1 990 1651 221 58 9 chr17 53117681 53118024 -42154627 + ORR1D2 LTR MaLR 11 370 0 1 990 297 235 8 183 chr17 53118508 53118628 -42154023 + MTD LTR MaLR 319 417 -2 1 990 657 92 0 0 chr17 53120104 53120202 -42152449 + (GA)n Simple_repeat Simple_repeat 1 98 0 1 990 466 204 17 34 chr17 53120160 53120338 -42152313 + GA-rich Low_complexity Low_complexity 2 176 0 1 990 371 218 164 94 chr17 53120405 53120618 -42152033 + RLTR40 LTR ERVK 374 601 -216 1 990 404 312 141 17 chr17 53120681 53120978 -42151673 + L1M2 LINE L1 3094 3427 -2716 1 990 454 294 40 17 chr17 53121022 53121195 -42151456 + L1M5 LINE L1 3501 3677 -2469 1 990 36240 30 0 0 chr17 53121922 53128348 -42144303 - L1Md_T LINE L1 0 6585 63 1 990 537 16 0 0 chr17 53128614 53128676 -42143975 + (TC)n Simple_repeat Simple_repeat 1 62 0 1 990 331 214 18 80 chr17 53129834 53129946 -42142705 + Lx2B LINE L1 6235 6339 -719 1 990 1631 273 51 8 chr17 53130077 53130154 -42142497 - RLTR16 LTR ERVK -12 493 413 1 990 342 0 0 0 chr17 53130154 53130192 -42142459 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 990 1631 273 51 8 chr17 53130192 53130587 -42142064 - RLTR16 LTR ERVK -93 412 2 1 990 1910 243 50 22 chr17 53130592 53131177 -42141474 + Lx2B LINE L1 6338 7050 -8 1 990 1979 148 19 9 chr17 53131193 53131513 -42141138 + Lx3A LINE L1 6642 6964 -17 1 990 444 67 0 0 chr17 53131516 53131576 -42141075 + (TAGA)n Simple_repeat Simple_repeat 1 60 0 1 990 375 23 0 0 chr17 53131578 53131622 -42141029 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 990 538 231 164 12 chr17 53131759 53131930 -42140721 + MTD LTR MaLR 223 419 0 1 990 298 295 9 79 chr17 53131960 53132074 -42140577 - PB1D7 SINE Alu -12 108 3 1 990 943 273 190 35 chr17 53132504 53133073 -42139578 + Lx8 LINE L1 6817 7473 0 1 990 226 379 125 33 chr17 53133096 53133336 -42139315 - LTR16C LTR ERVL -226 263 2 1 990 442 296 60 46 chr17 53133361 53133577 -42139074 - LTR41B LTR ERVL -23 735 517 1 990 386 255 110 20 chr17 53134364 53134464 -42138187 + MTD LTR MaLR 1 109 -310 1 990 698 208 163 54 chr17 53134464 53134667 -42137984 + URR1B DNA MER1_type 1 225 0 1 990 668 271 38 16 chr17 53134669 53134853 -42137798 + MTD LTR MaLR 104 291 -128 1 990 260 70 23 0 chr17 53134880 53134923 -42137728 + (CAAAAA)n Simple_repeat Simple_repeat 3 46 0 1 990 229 215 45 15 chr17 53134923 53134989 -42137662 + MTD LTR MaLR 286 353 -6 1 990 667 295 62 12 chr17 53136184 53136441 -42136210 + B4A SINE B4 5 274 -18 1 990 450 0 0 0 chr17 53136509 53136559 -42136092 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 990 253 334 48 30 chr17 53137069 53137177 -42135474 + B1F2 SINE Alu 6 122 -5 1 990 183 292 93 10 chr17 53137357 53137454 -42135197 - MIR SINE MIR -33 229 125 1 990 494 312 52 11 chr17 53138859 53139063 -42133588 + MLT1F2 LTR MaLR 1 199 -349 1 990 244 333 44 0 chr17 53139714 53139804 -42132847 + MLT1F2 LTR MaLR 370 463 -85 1 990 192 77 0 0 chr17 53139927 53139953 -42132698 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 1 990 1669 231 48 6 chr17 53141088 53141440 -42131211 + ORR1C2 LTR MaLR 16 382 -2 1 990 1175 215 85 0 chr17 53141467 53141714 -42130937 + ORR1C2-int LTR MaLR 27 294 -1076 1 990 21 0 0 0 chr17 53142064 53142085 -42130566 + AT_rich Low_complexity Low_complexity 1 21 0 1 990 257 300 87 22 chr17 53142131 53142223 -42130428 + PB1D7 SINE Alu 7 104 -16 1 990 396 0 0 0 chr17 53142499 53142543 -42130108 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 990 1156 22 15 0 chr17 53142543 53142678 -42129973 - B1_Mm SINE Alu -10 137 1 1 990 562 311 39 73 chr17 53142902 53143107 -42129544 - B3A SINE B2 0 198 1 1 990 225 119 0 0 chr17 53143248 53143290 -42129361 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 990 402 39 0 0 chr17 53143295 53143347 -42129304 + (GA)n Simple_repeat Simple_repeat 1 52 0 1 990 2755 93 33 5 chr17 53143565 53143954 -42128697 + MTB LTR MaLR 1 400 0 1 990 247 187 12 210 chr17 53143982 53144063 -42128588 + ID4_ SINE ID 3 67 -16 1 990 363 281 423 14 chr17 53144444 53144593 -42128058 - B3 SINE B2 -6 210 1 1 990 304 287 77 17 chr17 53144764 53144881 -42127770 - B3A SINE B2 -71 124 1 1 990 2786 45 0 3 chr17 53146000 53146338 -42126313 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 990 3993 58 52 2 chr17 53146338 53146894 -42125757 + IAPEz-int LTR ERVK 8 591 -5890 1 990 424 38 0 0 chr17 53146926 53146979 -42125672 + IAPEz-int LTR ERVK 1359 1411 -5070 1 990 1731 115 4 4 chr17 53146978 53147240 -42125411 + IAPEz-int LTR ERVK 2236 2497 -5183 1 990 869 81 24 0 chr17 53147237 53147360 -42125291 + IAPEz-int LTR ERVK 4785 4910 -2770 1 990 25627 8 1 0 chr17 53147360 53150314 -42122337 + IAPEz-int LTR ERVK 3525 6481 0 1 990 2775 47 0 3 chr17 53150314 53150652 -42121999 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 990 2557 166 101 13 chr17 53150822 53151359 -42121292 + RMER4B LTR ERVK 2 585 0 1 990 244 211 0 19 chr17 53151725 53151778 -42120873 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 990 262 280 28 0 chr17 53151779 53151886 -42120765 + L1M4 LINE L1 5665 5774 -410 1 990 295 236 0 0 chr17 53152247 53152302 -42120349 + ID4 SINE ID 12 66 -17 1 990 201 121 0 0 chr17 53152368 53152401 -42120250 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 990 556 297 101 36 chr17 53152849 53152910 -42119741 + RMER15 LTR ERVL 275 344 -231 1 990 950 79 50 0 chr17 53152910 53153050 -42119601 + L1_Mus1 LINE L1 6406 6552 -15 1 990 207 0 0 0 chr17 53153050 53153073 -42119578 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 990 556 297 101 36 chr17 53153073 53153286 -42119365 + RMER15 LTR ERVL 345 567 -8 1 990 204 231 0 0 chr17 53153504 53153556 -42119095 + GA-rich Low_complexity Low_complexity 2 53 0 1 990 331 310 30 49 chr17 53154569 53154753 -42117898 + L1M5 LINE L1 5533 5706 -2176 1 990 1210 261 77 39 chr17 53154778 53155192 -42117459 + Lx8 LINE L1 7041 7470 -3 1 990 24 0 0 0 chr17 53156242 53156266 -42116385 + AT_rich Low_complexity Low_complexity 1 24 0 1 990 1495 65 15 0 chr17 53156287 53156487 -42116164 - L1Md_F2 LINE L1 -10 6572 6370 1 990 456 282 0 37 chr17 53156667 53156719 -42115932 + Lx7 LINE L1 5611 5658 -2038 1 990 2543 130 57 46 chr17 53156719 53157196 -42115455 + RLTR45 LTR ERVK 1 482 0 1 990 492 202 0 0 chr17 53157196 53157305 -42115346 + L1M1 LINE L1 5692 5800 -503 1 990 3654 108 5 5 chr17 53157306 53157876 -42114775 - L1_Mm LINE L1 -305 5578 5009 1 990 7597 55 1 0 chr17 53157893 53158866 -42113785 + L1_Mus1 LINE L1 5588 6561 -6 2 990 244 291 48 0 chr17 53158883 53158986 -42113665 + L1_Rod LINE L1 5723 5830 -17 2 990 186 103 0 0 chr17 53159192 53159221 -42113430 + (TATATG)n Simple_repeat Simple_repeat 2 30 0 2 990 374 291 158 35 chr17 53159233 53159492 -42113159 + B4A SINE B4 1 291 -1 2 990 468 111 0 0 chr17 53159504 53159576 -42113075 + (CA)n Simple_repeat Simple_repeat 2 73 0 2 990 1955 134 289 25 chr17 53160419 53160814 -42111837 - RLTR19 LTR ERVK 0 499 1 2 990 273 132 38 0 chr17 53160814 53160867 -42111784 - RLTR19-int LTR ERVK 0 6137 6083 2 990 234 0 0 0 chr17 53161065 53161091 -42111560 + (TC)n Simple_repeat Simple_repeat 1 26 0 2 990 468 0 0 0 chr17 53161091 53161142 -42111509 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 990 2950 117 9 9 chr17 53161286 53161750 -42110901 - RLTR19-int LTR ERVK -66 6071 5608 2 990 884 164 0 0 chr17 53162115 53162255 -42110396 - RLTR19-int LTR ERVK -527 5610 5471 2 990 15824 127 72 40 chr17 53162258 53165368 -42107283 - RLTR19-int LTR ERVK -1083 5054 1847 2 990 6538 131 80 38 chr17 53165376 53166672 -42105979 - RLTR19-int LTR ERVK -4498 1639 289 2 990 531 0 0 0 chr17 53166706 53166765 -42105886 + (CAAAAA)n Simple_repeat Simple_repeat 2 60 0 2 990 454 216 176 33 chr17 53166922 53167104 -42105547 - RLTR19-int LTR ERVK -5922 215 8 2 990 1961 181 55 112 chr17 53167111 53167640 -42105011 - RLTR19 LTR ERVK 0 499 1 2 990 3408 101 25 25 chr17 53167654 53168171 -42104480 - L1_Mus4 LINE L1 -3 6633 6117 2 990 4087 162 9 1 chr17 53168171 53168931 -42103720 + L1_Mur2 LINE L1 4496 5261 -616 2 990 294 200 0 0 chr17 53168931 53168996 -42103655 + Lx9 LINE L1 7569 7633 -11 2 990 23 0 0 0 chr17 53169000 53169023 -42103628 + AT_rich Low_complexity Low_complexity 1 23 0 2 990 607 239 131 18 chr17 53169065 53169287 -42103364 + MTC-int LTR MaLR 1012 1258 0 2 990 1409 229 99 17 chr17 53169321 53169676 -42102975 + MTD LTR MaLR 36 419 0 2 990 338 261 36 194 chr17 53170268 53170572 -42102079 - RLTR14-int LTR ERV1 -4616 701 446 2 990 186 43 0 0 chr17 53170672 53170695 -42101956 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 2 990 1639 222 49 29 chr17 53170958 53171366 -42101285 - RLTR14-int LTR ERV1 -4901 416 1 2 990 1621 213 10 0 chr17 53171366 53171676 -42100975 - RLTR14 LTR ERV1 0 382 70 2 990 480 314 47 137 chr17 53171693 53172102 -42100549 - L1MC2 LINE L1 -91 6253 5882 2 990 34906 36 3 8 chr17 53172198 53177597 -42095054 + L1Md_T LINE L1 213 5586 -297 2 990 8519 29 2 0 chr17 53177597 53178590 -42094061 + L1Md_T LINE L1 5587 6581 -1 2 990 399 202 117 70 chr17 53178826 53178954 -42093697 + MT2B LTR ERVL 125 258 -343 2 990 707 186 31 0 chr17 53178865 53178994 -42093657 + B1_Mur3 SINE Alu 15 147 -2 2 990 837 207 38 24 chr17 53179155 53179368 -42093283 - B3 SINE B2 0 216 1 2 990 413 36 0 18 chr17 53180071 53180127 -42092524 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 2 990 3619 52 31 0 chr17 53180161 53180619 -42092032 - L1_Mus1 LINE L1 -1 6566 6095 2 990 22 88 0 0 chr17 53180649 53180706 -42091945 + AT_rich Low_complexity Low_complexity 1 57 0 2 990 307 345 8 57 chr17 53180810 53180933 -42091718 - ID_B1 SINE B4 -43 181 65 2 990 21 57 0 0 chr17 53181323 53181358 -42091293 + AT_rich Low_complexity Low_complexity 1 35 0 2 990 2671 101 143 11 chr17 53181740 53182210 -42090441 - RLTR47_MM LTR ERV1 0 532 1 2 990 1773 234 46 24 chr17 53182636 53183095 -42089556 + RLTR20B3 LTR ERVK 31 499 -78 2 990 895 260 48 50 chr17 53183157 53183465 -42089186 - RLTR12B LTR ERVK -200 328 1 2 990 895 163 7 20 chr17 53185357 53185507 -42087144 + B1_Mur4 SINE Alu 2 149 -1 2 990 440 318 49 40 chr17 53185990 53186264 -42086387 + MTEa LTR MaLR 75 379 0 2 990 210 71 0 0 chr17 53186289 53186317 -42086334 + (TTAAA)n Simple_repeat Simple_repeat 5 32 0 2 990 509 314 142 13 chr17 53186813 53187039 -42085612 + MLT1F2 LTR MaLR 305 559 -1 2 990 1222 103 22 0 chr17 53187942 53188127 -42084524 + L1_Mus3 LINE L1 6450 6638 0 2 990 852 183 21 0 chr17 53188700 53188842 -42083809 + B1_Mur4 SINE Alu 6 150 0 2 990 5713 118 19 33 chr17 53189413 53190390 -42082261 + L1VL4 LINE L1 24 987 -5315 2 990 17382 167 28 3 chr17 53190391 53194014 -42078637 + Lx3_Mus LINE L1 1164 4879 -1007 2 990 8109 24 0 0 chr17 53194014 53195443 -42077208 - L1Md_A LINE L1 0 6582 5154 2 990 4488 189 42 2 chr17 53195441 53196449 -42076202 + Lx3_Mus LINE L1 4852 5905 -1104 2 990 2778 184 31 4 chr17 53196449 53196988 -42075663 + Lx LINE L1 6096 6649 -5 2 990 1246 232 34 3 chr17 53196988 53197003 -42075648 + Lx3_Mus LINE L1 5906 5920 -1089 2 990 324 0 0 0 chr17 53197940 53197976 -42074675 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 990 22 56 0 0 chr17 53198011 53198047 -42074604 + AT_rich Low_complexity Low_complexity 1 36 0 2 990 2262 274 32 2 chr17 53199306 53199895 -42072756 + RMER1A Other Other 79 685 -345 2 990 760 261 36 76 chr17 53199896 53200252 -42072399 - RLTR15 LTR ERVK -17 342 1 2 990 1378 174 8 119 chr17 53200252 53200623 -42072028 + RMER1B Other Other 733 1062 -4 2 990 225 300 39 39 chr17 53200641 53200797 -42071854 + L1MB4 LINE L1 5298 5453 -727 2 990 1118 276 112 3 chr17 53200818 53201174 -42071477 + MTD LTR MaLR 25 419 0 2 990 781 304 39 14 chr17 53201268 53201628 -42071023 + L1MB4 LINE L1 5552 5920 -260 2 990 26 0 0 0 chr17 53201663 53201689 -42070962 + AT_rich Low_complexity Low_complexity 1 26 0 2 990 293 156 273 0 chr17 53201706 53201834 -42070817 - Lx9 LINE L1 -57 7587 7425 2 990 778 248 69 27 chr17 53201896 53202157 -42070494 - Lx9 LINE L1 -509 7135 6864 2 990 206 154 0 55 chr17 53202277 53202332 -42070319 + T-rich Low_complexity Low_complexity 2 53 0 2 990 1072 219 35 0 chr17 53203238 53203466 -42069185 - Lx6 LINE L1 -10 7450 7215 2 990 8912 175 43 28 chr17 53203481 53205131 -42067520 - L1_Mur3 LINE L1 -1682 4198 2564 2 990 369 43 0 0 chr17 53205131 53205178 -42067473 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 990 8912 175 43 28 chr17 53205178 53205613 -42067038 - L1_Mur3 LINE L1 -3317 2563 2083 2 990 22247 144 23 30 chr17 53205728 53208884 -42063767 - L1_Mus4 LINE L1 -7 6629 3553 2 990 288 0 0 0 chr17 53208884 53208916 -42063735 + (ATG)n Simple_repeat Simple_repeat 2 33 0 2 990 22247 161 17 43 chr17 53208916 53210170 -42062481 - L1_Mus4 LINE L1 -2331 3552 2311 2 990 4187 103 3 2 chr17 53210170 53210763 -42061888 + L1_Mus3 LINE L1 6039 6632 -6 2 990 22247 168 14 32 chr17 53210763 53212558 -42060093 - L1_Mus4 LINE L1 -3573 2310 552 2 990 234 246 0 0 chr17 53212563 53212632 -42060019 - L1_Mur3 LINE L1 -3848 2029 1961 2 990 5347 112 63 6 chr17 53212643 53213494 -42059157 - RMER17A2 LTR ERVK -5 901 2 2 990 4484 208 57 7 chr17 53213495 53215056 -42057595 - L1_Mur3 LINE L1 -3920 1960 320 2 123 2020 181 68 5 chr17 53215056 53215450 -42057201 + MTC LTR MaLR 3 421 0 2 991 4484 233 55 11 chr17 53215450 53215711 -42056940 - L1_Mur3 LINE L1 -7409 319 56 2 991 585 42 0 0 chr17 53215720 53215792 -42056859 + (TG)n Simple_repeat Simple_repeat 1 72 0 2 991 342 239 28 40 chr17 53215792 53215891 -42056760 - MTEa LTR MaLR -15 364 261 2 991 7577 164 37 41 chr17 53215899 53217809 -42054842 - Lx2 LINE L1 0 6997 5134 2 991 5760 123 23 12 chr17 53217810 53218186 -42054465 - L1VL4 LINE L1 -392 3167 2776 2 991 279 0 0 0 chr17 53218186 53218217 -42054434 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 991 5760 123 23 12 chr17 53218217 53218537 -42054114 - L1VL4 LINE L1 -784 2775 2457 2 991 2775 99 7 19 chr17 53218537 53218949 -42053702 - RLTR9E LTR ERVK -2 407 1 2 991 5760 123 23 12 chr17 53218949 53219290 -42053361 - L1VL4 LINE L1 -1103 2456 2119 2 991 2707 148 25 15 chr17 53219278 53220170 -42052481 - L1VL4 LINE L1 -2236 1323 425 2 991 662 318 80 16 chr17 53220217 53220466 -42052185 - MTEa LTR MaLR -85 294 30 2 991 647 316 46 34 chr17 53220707 53220969 -42051682 - MLT2F LTR ERVL -307 356 92 2 991 218 289 108 29 chr17 53221388 53221527 -42051124 + MIR SINE MIR 101 250 -12 2 991 719 259 211 35 chr17 53221600 53221912 -42050739 - ORR1D2 LTR MaLR -3 367 1 2 991 4650 82 8 2 chr17 53221988 53222614 -42050037 - L1_Mus4 LINE L1 -4 6632 6003 2 991 907 128 23 3 chr17 53222697 53222889 -42049762 + MERVL-int LTR ERVL 5217 5524 -237 2 991 338 267 93 29 chr17 53222895 53223034 -42049617 + ORR1A3-int LTR MaLR 493 640 -1323 2 991 302 0 0 0 chr17 53223034 53223072 -42049579 + MERVL-int LTR ERVL 5448 5485 0 2 991 3467 66 2 2 chr17 53223072 53223525 -42049126 + MT2C_Mm LTR ERVL 1 453 -22 2 991 593 219 183 5 chr17 53223781 53223815 -42048836 - MT2A LTR ERVL 0 533 500 2 991 563 0 15 0 chr17 53223815 53223882 -42048769 + (TAGA)n Simple_repeat Simple_repeat 3 70 0 2 991 593 219 183 5 chr17 53223882 53224044 -42048607 - MT2A LTR ERVL -34 499 303 2 991 713 272 23 11 chr17 53224058 53224233 -42048418 - MT2A LTR ERVL -296 237 61 2 991 2961 203 42 16 chr17 53224233 53224858 -42047793 + Lx5 LINE L1 6397 7037 -13 2 991 519 45 0 0 chr17 53224858 53224924 -42047727 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 2 991 337 250 25 0 chr17 53225023 53225103 -42047548 - MT2A LTR ERVL -449 84 3 2 991 252 0 0 0 chr17 53225451 53225479 -42047172 + (A)n Simple_repeat Simple_repeat 1 28 0 2 991 196 170 38 0 chr17 53225636 53225689 -42046962 + GA-rich Low_complexity Low_complexity 1 55 0 2 991 445 322 79 54 chr17 53225755 53225995 -42046656 + MIRb SINE MIR 23 268 0 2 991 192 77 0 0 chr17 53226052 53226078 -42046573 + (A)n Simple_repeat Simple_repeat 1 26 0 2 991 34 24 0 0 chr17 53226881 53226922 -42045729 + AT_rich Low_complexity Low_complexity 1 41 0 2 991 346 301 44 0 chr17 53227306 53227419 -42045232 - Charlie1b DNA MER1_type 0 523 406 2 991 344 296 141 4 chr17 53227429 53227677 -42044974 + L1M2 LINE L1 5001 5282 -861 2 991 963 278 33 16 chr17 53228009 53228313 -42044338 - Lx8 LINE L1 -565 6908 6600 2 991 430 304 27 13 chr17 53228347 53228497 -42044154 + Lx8 LINE L1 7141 7292 -181 2 991 1971 227 27 2 chr17 53228586 53228992 -42043659 - MTC LTR MaLR 0 421 6 2 991 241 368 0 0 chr17 53229553 53229629 -42043022 + ID4_ SINE ID 5 80 -3 2 991 195 42 0 0 chr17 53229706 53229730 -42042921 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 2 991 5755 189 25 8 chr17 53229731 53231786 -42040865 - Lx4B LINE L1 -22 7036 4772 2 991 570 350 17 7 chr17 53231900 53232111 -42040540 - B3A SINE B2 -4 212 7 2 991 1043 128 0 0 chr17 53232402 53232543 -42040108 + B1_Mus1 SINE Alu 2 142 -6 2 991 387 0 0 0 chr17 53232554 53232597 -42040054 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 991 885 262 44 8 chr17 53233287 53233537 -42039114 + Lx8 LINE L1 6969 7227 -246 2 991 3128 165 29 58 chr17 53233540 53234159 -42038492 - MT2B LTR ERVL 0 601 1 2 991 309 181 0 108 chr17 53234198 53234291 -42038360 - ORR1A3-int LTR MaLR -1324 639 557 2 991 3762 170 30 7 chr17 53234319 53235008 -42037643 - MERVL_2A-int LTR ERVL -289 5472 4768 2 991 542 188 185 15 chr17 53235009 53235139 -42037512 + RLTR17 LTR ERVK 541 692 0 2 991 910 237 77 55 chr17 53235139 53235465 -42037186 + RMER3D-int LTR ERVK 1 333 -2509 2 991 8377 147 10 28 chr17 53235457 53235555 -42037096 - MERVL_2A-int LTR ERVL -2288 3473 3394 2 991 2735 92 15 18 chr17 53235555 53235953 -42036698 - L1Md_F2 LINE L1 -2 6580 6184 2 991 8377 147 10 28 chr17 53235953 53236564 -42036087 - MERVL_2A-int LTR ERVL -2368 3393 2784 2 991 3795 7 121 0 chr17 53236564 53237004 -42035647 - MT2_Mm LTR ERVL 0 493 1 2 991 8377 147 10 28 chr17 53237004 53237762 -42034889 - MERVL_2A-int LTR ERVL -2978 2783 2032 2 991 481 159 11 0 chr17 53237765 53237853 -42034798 - MERVL_2A-int LTR ERVL -4497 1264 1176 2 991 1463 195 81 3 chr17 53237869 53238204 -42034447 - Lx3C LINE L1 -2 6974 6614 2 991 7220 160 37 6 chr17 53238203 53239687 -42032964 - L1_Mur1 LINE L1 -1428 4449 2920 2 991 3956 154 22 11 chr17 53239675 53240497 -42032154 - L1_Mur1 LINE L1 -3856 2030 1229 2 991 2646 111 48 53 chr17 53240497 53240953 -42031698 - Lx3A LINE L1 -7 6974 6521 2 991 1842 189 10 80 chr17 53240953 53241313 -42031338 - L1_Mur1 LINE L1 -5742 1242 878 2 991 4488 196 10 72 chr17 53241777 53241840 -42030811 - MERVL_2A-int LTR ERVL -4438 1047 991 2 991 5149 110 39 57 chr17 53241840 53242763 -42029888 + RMER17A2 LTR ERVK 1 906 0 3 991 4488 196 10 72 chr17 53242763 53243815 -42028836 - MERVL_2A-int LTR ERVL -4495 990 1 2 991 2765 152 131 67 chr17 53243815 53244380 -42028271 - MT2B LTR ERVL 0 601 1 2 991 313 331 0 30 chr17 53244383 53244485 -42028166 + Lx8 LINE L1 7229 7327 -146 3 991 594 0 0 0 chr17 53244485 53244551 -42028100 + (GAAA)n Simple_repeat Simple_repeat 3 68 0 3 991 313 331 0 30 chr17 53244551 53244579 -42028072 + Lx8 LINE L1 7328 7355 -118 3 991 828 293 20 73 chr17 53244644 53244891 -42027760 - ORR1E LTR MaLR -120 239 6 3 991 294 375 120 25 chr17 53245438 53245712 -42026939 + LTR16A1 LTR ERVL 157 456 0 3 991 445 232 14 11 chr17 53246051 53246232 -42026419 + Lx9 LINE L1 6818 7155 -489 3 991 747 324 18 18 chr17 53246263 53246593 -42026058 + Lx8 LINE L1 7113 7442 -31 3 991 1507 115 26 10 chr17 53246591 53247003 -42025648 + L1_Mur1 LINE L1 1053 1474 -4412 3 991 34156 50 10 5 chr17 53247010 53252307 -42020344 + L1Md_T LINE L1 301 5586 -297 3 991 8463 32 1 0 chr17 53252307 53253301 -42019350 + L1Md_T LINE L1 5587 6581 -1 3 991 5014 117 15 10 chr17 53253311 53253782 -42018869 + Lx3B LINE L1 1470 1943 -3943 3 991 1806 50 0 0 chr17 53253782 53254003 -42018648 + L1Md_T LINE L1 6362 6582 0 3 991 5014 117 15 10 chr17 53254003 53254412 -42018239 + Lx3B LINE L1 1944 2353 -3533 3 991 6459 112 22 7 chr17 53255143 53256254 -42016397 + Lx3B LINE L1 2357 3484 -2402 3 991 33866 50 0 4 chr17 53256255 53261937 -42010714 + L1Md_T LINE L1 1 5589 -297 3 991 8383 33 2 0 chr17 53261937 53262931 -42009720 + L1Md_T LINE L1 5590 6585 0 3 991 1043 113 0 0 chr17 53262949 53263117 -42009534 + Lx3B LINE L1 3470 3637 -2249 3 991 11494 116 6 18 chr17 53263117 53264328 -42008323 + Lx3B LINE L1 3989 5191 -695 3 991 246 32 0 0 chr17 53264328 53264359 -42008292 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 991 11494 129 18 10 chr17 53264359 53266122 -42006529 + Lx3B LINE L1 5192 6968 -5 3 991 639 39 0 0 chr17 53266126 53266204 -42006447 + (CATA)n Simple_repeat Simple_repeat 2 79 0 3 991 1461 209 32 29 chr17 53266376 53266716 -42005935 - Lx5 LINE L1 -1 7049 6709 3 991 802 261 5 53 chr17 53267634 53267824 -42004827 + B3A SINE B2 1 181 -17 3 991 339 130 0 0 chr17 53267828 53267882 -42004769 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 991 243 0 0 0 chr17 53267921 53267948 -42004703 + (TA)n Simple_repeat Simple_repeat 1 27 0 3 991 250 259 23 12 chr17 53267990 53268076 -42004575 + L1M4c LINE L1 1739 1825 -4559 3 991 519 221 39 0 chr17 53269224 53269328 -42003323 + PB1D10 SINE Alu 5 112 -5 3 991 393 287 40 24 chr17 53269527 53269652 -42002999 - RMER15 LTR ERVL -448 127 1 3 991 248 160 0 0 chr17 53269669 53269719 -42002932 - L1M2 LINE L1 -670 5621 5572 3 991 602 250 16 49 chr17 53270680 53270865 -42001786 + B3A SINE B2 4 182 -16 3 991 603 288 7 0 chr17 53271312 53271458 -42001193 + B1_Mur1 SINE Alu 1 147 -2 3 991 180 286 84 72 chr17 53271519 53271602 -42001049 + L3 LINE CR1 3340 3423 -1066 3 991 2949 100 36 98 chr17 53271602 53272155 -42000496 - MURVY-LTR LTR ERV1 0 519 1 3 991 1143 95 0 0 chr17 53272211 53272359 -42000292 + B1_Mus1 SINE Alu 1 148 0 3 991 258 138 0 0 chr17 53272360 53272418 -42000233 + (A)n Simple_repeat Simple_repeat 1 58 0 3 991 308 292 10 2 chr17 53272524 53272649 -42000002 + L1M5 LINE L1 5531 5655 -689 3 991 183 188 0 0 chr17 53272666 53272714 -41999937 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 991 478 301 52 22 chr17 53273279 53273415 -41999236 + ID_B1 SINE B4 79 218 -6 3 991 21 0 0 0 chr17 53275491 53275512 -41997139 + AT_rich Low_complexity Low_complexity 1 21 0 3 991 238 133 62 62 chr17 53275700 53275748 -41996903 - PB1D10 SINE Alu 0 117 70 3 991 526 290 65 0 chr17 53275705 53275829 -41996822 - ID_B1 SINE B4 -2 222 91 3 991 235 364 43 43 chr17 53276340 53276478 -41996173 + MLT1H LTR MaLR 141 278 -271 3 991 8549 79 38 39 chr17 53276748 53278358 -41994293 - L1_Mus2 LINE L1 0 6566 4888 3 991 231 185 43 138 chr17 53278358 53278452 -41994199 + RMER20A LTR ERVK 164 248 -268 3 991 8549 79 38 39 chr17 53278452 53278935 -41993716 - L1_Mus2 LINE L1 0 4887 4382 3 991 426 39 0 0 chr17 53279046 53279098 -41993553 + (TTATA)n Simple_repeat Simple_repeat 2 53 0 3 991 457 316 35 49 chr17 53279125 53279268 -41993383 - RSINE1 SINE B4 -21 144 4 3 991 562 329 12 48 chr17 53279948 53280114 -41992537 - RSINE1 SINE B4 0 165 6 3 991 8156 85 13 2 chr17 53281073 53282158 -41990493 - Lx3_Mus LINE L1 0 7009 5915 3 991 1132 106 0 11 chr17 53282158 53282339 -41990312 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 3 991 8156 85 13 2 chr17 53282339 53282387 -41990264 - Lx3_Mus LINE L1 -1095 5914 5864 3 991 5413 84 7 1 chr17 53282387 53283151 -41989500 + Lx3_Mus LINE L1 5049 5816 -70 3 991 4380 237 44 54 chr17 53283315 53284949 -41987702 - Lx5 LINE L1 -3 7047 5427 3 991 188 143 0 23 chr17 53284955 53284998 -41987653 + (CTTA)n Simple_repeat Simple_repeat 2 43 0 3 991 5800 187 69 28 chr17 53284999 53287247 -41985404 - Lx4B LINE L1 -19 6981 4633 3 991 496 288 44 62 chr17 53287247 53287473 -41985178 - RMER12 LTR ERVK 0 1322 1101 3 991 2310 118 24 8 chr17 53287680 53288057 -41984594 - RLTR22_Mur LTR ERVK -993 855 473 3 991 33376 71 3 0 chr17 53288057 53291811 -41980840 - L1_Mus1 LINE L1 -12 6558 2788 3 991 1195 20 0 19 chr17 53291811 53291967 -41980684 + (CCCTAA)n Simple_repeat Simple_repeat 6 158 0 3 991 33376 87 4 13 chr17 53291967 53294505 -41978146 - L1_Mus1 LINE L1 -3099 2787 304 3 991 21362 110 2 4 chr17 53294513 53296974 -41975677 - L1Md_F LINE L1 -1270 4613 2158 3 991 1299 92 5 11 chr17 53296974 53297160 -41975491 - B2_Mm1t SINE B2 -7 186 2 3 991 21362 134 3 62 chr17 53297160 53298699 -41973952 - L1Md_F LINE L1 -3726 2157 725 3 991 321 299 16 8 chr17 53298707 53298835 -41973816 - L1Md_F LINE L1 -5813 803 675 3 991 233 288 12 104 chr17 53298961 53299124 -41973527 - L1VL1 LINE L1 -6022 400 253 3 991 3092 127 22 4 chr17 53299157 53299647 -41973004 - RLTR22_Mur LTR ERVK -1347 501 3 3 991 3011 154 38 0 chr17 53299649 53300209 -41972442 - Lx4B LINE L1 -1239 4638 4058 3 991 2049 174 21 5 chr17 53300207 53300629 -41972022 - Lx4B LINE L1 -3944 1942 1514 3 991 1100 67 7 0 chr17 53300637 53300787 -41971864 + (TTCTCC)n Simple_repeat Simple_repeat 3 153 0 3 991 5568 181 93 13 chr17 53300787 53302064 -41970587 - L1_Mur2 LINE L1 -756 5124 3746 3 991 2783 165 24 4 chr17 53302070 53302618 -41970033 - L1_Mur2 LINE L1 -3096 2781 2223 3 991 2901 238 88 82 chr17 53302618 53303515 -41969136 - RMER19B LTR ERVK 0 902 1 3 991 485 176 0 0 chr17 53303516 53303601 -41969050 - L1_Mur2 LINE L1 -3643 2237 2153 3 991 1461 237 52 73 chr17 53303605 53304101 -41968550 + RLTR11A LTR ERVK 3 488 -40 3 991 3019 195 101 13 chr17 53304145 53304279 -41968372 - L1_Mur2 LINE L1 -3741 2139 2014 3 991 3339 150 17 22 chr17 53304279 53304867 -41967784 - RMER4B LTR ERVK 0 585 1 3 991 3019 206 79 14 chr17 53304867 53305963 -41966688 - L1_Mur2 LINE L1 -3867 2013 888 3 991 2473 112 142 0 chr17 53306635 53307101 -41965550 - RLTR47_MM LTR ERV1 0 532 1 3 991 1892 272 21 11 chr17 53307386 53308036 -41964615 - MuRRS4-int LTR ERV1 -1049 4014 3536 3 991 383 348 50 43 chr17 53308419 53309073 -41963578 - MuLV-int LTR ERV1 -3170 4436 3678 3 991 8614 92 10 2 chr17 53309214 53310528 -41962123 - MusHAL1 LINE L1 -114 2598 1275 3 991 7879 63 3 3 chr17 53310527 53311596 -41961055 + L1Md_F2 LINE L1 4518 5586 -297 3 991 7380 71 19 3 chr17 53311596 53312576 -41960075 + L1Md_F2 LINE L1 5587 6582 0 3 991 2290 97 8 29 chr17 53312578 53312959 -41959692 - MusHAL1 LINE L1 -1652 1060 688 3 991 2336 101 78 174 chr17 53313333 53313921 -41958730 - RLTR47_MM LTR ERV1 0 532 1 3 991 375 321 59 64 chr17 53314233 53314469 -41958182 - MLT-int LTR MaLR -1121 614 380 3 991 519 340 66 45 chr17 53314514 53314757 -41957894 - MLT1A LTR MaLR -126 248 1 3 991 225 259 24 47 chr17 53314899 53314984 -41957667 + L4 LINE RTE 367 449 -1580 3 991 28 0 0 0 chr17 53314984 53315012 -41957639 + AT_rich Low_complexity Low_complexity 1 28 0 3 991 7926 30 4 0 chr17 53315019 53316059 -41956592 - L1Md_T LINE L1 -3 6579 5534 3 991 186 351 88 104 chr17 53316216 53316601 -41956050 - L2 LINE L2 -340 3079 2701 3 991 858 164 19 6 chr17 53316672 53316832 -41955819 + URR1A DNA MER1_type 59 220 -6 3 991 270 95 0 0 chr17 53316997 53317039 -41955612 + (CAGA)n Simple_repeat Simple_repeat 2 43 0 3 991 209 211 0 60 chr17 53317057 53317173 -41955478 + (TATATG)n Simple_repeat Simple_repeat 5 113 0 3 991 531 172 19 25 chr17 53317148 53317309 -41955342 + (CATA)n Simple_repeat Simple_repeat 4 163 0 3 991 221 208 28 19 chr17 53317332 53317440 -41955211 + (CATA)n Simple_repeat Simple_repeat 2 110 0 3 991 720 139 17 17 chr17 53317456 53317631 -41955020 + (CA)n Simple_repeat Simple_repeat 2 176 0 3 991 4986 104 42 5 chr17 53319364 53320110 -41952541 - L1_Mus3 LINE L1 -8 6630 5858 3 991 314 346 37 31 chr17 53320126 53320317 -41952334 + L1M3d LINE L1 1 192 -5699 3 991 4329 131 54 7 chr17 53320830 53321567 -41951084 - L1_Mur1 LINE L1 0 5886 5115 3 991 544 331 66 67 chr17 53321588 53322077 -41950574 + RLTR17 LTR ERVK 32 566 -126 3 991 780 166 33 7 chr17 53322254 53322406 -41950245 + L1_Mur3 LINE L1 4009 4164 -1716 3 991 33878 45 0 3 chr17 53322391 53327751 -41944900 + L1Md_T LINE L1 150 5588 -298 3 991 8412 36 1 0 chr17 53327752 53328747 -41943904 + L1Md_T LINE L1 5590 6585 0 3 991 2790 178 14 3 chr17 53328757 53329327 -41943324 + L1_Mur3 LINE L1 4147 4722 -1158 3 991 1294 301 63 19 chr17 53329335 53329843 -41942808 + Lx6 LINE L1 6544 7430 -30 3 991 548 319 44 26 chr17 53329850 53330191 -41942460 + L1MB1 LINE L1 5821 6167 -1 3 991 441 303 33 0 chr17 53330280 53330402 -41942249 + B1F SINE Alu 15 140 -9 3 991 650 250 133 6 chr17 53330638 53330819 -41941832 + B3 SINE B2 4 207 -9 3 991 736 285 100 13 chr17 53330901 53331132 -41941519 - ORR1E-int LTR MaLR -1326 254 4 3 991 1076 320 71 22 chr17 53331137 53331166 -41941485 - ORR1E LTR MaLR -10 349 326 3 991 2261 121 6 0 chr17 53331166 53331489 -41941162 + ORR1A2 LTR MaLR 3 327 0 3 991 1076 320 71 22 chr17 53331489 53331782 -41940869 - ORR1E LTR MaLR -34 325 11 3 991 551 288 75 48 chr17 53331816 53332111 -41940540 + L1M2 LINE L1 4909 5211 -932 3 991 24 0 0 0 chr17 53332641 53332665 -41939986 + AT_rich Low_complexity Low_complexity 1 24 0 3 991 5065 159 35 9 chr17 53333316 53334358 -41938293 + L1VL4 LINE L1 1 867 -5435 3 991 3329 72 2 10 chr17 53334363 53334770 -41937881 + L1_Mus2 LINE L1 6163 6566 0 3 991 809 233 44 83 chr17 53334778 53335007 -41937644 + MTE2a LTR MaLR 108 327 -52 3 991 567 107 0 0 chr17 53335008 53335092 -41937559 + (GGAA)n Simple_repeat Simple_repeat 3 86 0 3 991 3828 115 10 2 chr17 53335092 53335691 -41936960 + MusHAL1 LINE L1 217 820 -1892 3 991 2906 19 0 0 chr17 53336463 53336787 -41935864 - L1Md_T LINE L1 -202 6380 6057 3 991 1676 42 0 0 chr17 53336787 53336980 -41935671 + L1Md_A LINE L1 6389 6581 -1 3 991 4734 120 22 25 chr17 53338040 53338863 -41933788 + MusHAL1 LINE L1 800 1619 -1093 3 991 13321 161 11 31 chr17 53338862 53340511 -41932140 + Lx2 LINE L1 3460 5111 -772 3 991 1238 50 0 0 chr17 53340511 53340652 -41931999 + B1_Mus2 SINE Alu 1 141 -6 3 991 13321 161 11 31 chr17 53340652 53340721 -41931930 + Lx2 LINE L1 5112 5136 -747 3 991 497 55 0 14 chr17 53340721 53340795 -41931856 + (TAAA)n Simple_repeat Simple_repeat 1 73 0 3 991 13321 161 11 31 chr17 53340795 53341527 -41931124 + Lx2 LINE L1 5137 5864 -19 3 991 189 74 0 0 chr17 53341527 53341554 -41931097 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 991 6563 131 28 8 chr17 53341554 53342313 -41930338 + Lx2 LINE L1 5865 6645 -352 3 991 1063 151 50 41 chr17 53342311 53342532 -41930119 + Lx2 LINE L1 6775 6997 0 3 991 524 302 145 15 chr17 53342887 53343149 -41929502 + Lx8 LINE L1 7176 7471 -2 4 991 4577 113 2 5 chr17 53344561 53345164 -41927487 + MT2B LTR ERVL 1 601 0 4 991 207 0 0 0 chr17 53345165 53345188 -41927463 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 991 4276 76 15 0 chr17 53345665 53345681 -41926970 + L1_Mus1 LINE L1 6022 6042 -525 4 991 261 0 0 0 chr17 53345681 53345710 -41926941 + (GA)n Simple_repeat Simple_repeat 1 29 0 4 991 4276 76 15 0 chr17 53345710 53346230 -41926421 + L1_Mus1 LINE L1 6043 6565 -2 4 123 724 71 26 17 chr17 53346256 53346371 -41926280 + (GGGGA)n Simple_repeat Simple_repeat 2 117 0 4 992 3004 166 167 14 chr17 53347360 53348013 -41924638 + RMER6A LTR ERVK 4 756 0 4 992 703 269 6 13 chr17 53348189 53348347 -41924304 + B3A SINE B2 1 157 -41 4 992 324 127 0 0 chr17 53348361 53348416 -41924235 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 992 32 26 0 0 chr17 53348707 53348746 -41923905 + AT_rich Low_complexity Low_complexity 1 39 0 4 992 353 295 42 0 chr17 53348799 53348894 -41923757 - MTEa LTR MaLR -280 99 1 4 992 255 366 36 0 chr17 53350360 53350472 -41922179 - B1F2 SINE Alu -25 124 9 4 992 403 327 10 0 chr17 53350522 53350626 -41922025 + PB1D10 SINE Alu 6 110 -7 4 992 714 302 26 0 chr17 53350792 53350984 -41921667 + B3 SINE B2 11 207 -9 4 992 32869 91 8 1 chr17 53351104 53356986 -41915665 - L1_Mus1 LINE L1 -1 6566 639 4 992 646 160 0 0 chr17 53356982 53357082 -41915569 - L1_Mus1 LINE L1 -6131 507 408 4 992 2806 120 0 10 chr17 53357145 53357556 -41915095 + Lx2A1 LINE L1 6598 7004 -4 4 992 410 327 0 0 chr17 53358326 53358427 -41914224 - PB1D10 SINE Alu -7 110 10 4 992 450 0 0 0 chr17 53358792 53358842 -41913809 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 992 1900 154 17 20 chr17 53359045 53359397 -41913254 + RLTR15 LTR ERVK 9 359 0 4 992 5035 152 16 11 chr17 53359762 53360552 -41912099 + Lx4B LINE L1 6260 7053 -5 4 992 201 200 25 0 chr17 53360586 53360626 -41912025 + A-rich Low_complexity Low_complexity 4 44 0 4 992 344 22 22 0 chr17 53361031 53361076 -41911575 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 4 992 1014 281 83 17 chr17 53362080 53362444 -41910207 - MTD LTR MaLR -1 418 5 4 992 261 0 0 0 chr17 53362487 53362516 -41910135 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4 992 372 43 0 0 chr17 53363256 53363302 -41909349 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 992 547 168 35 0 chr17 53363664 53363807 -41908844 + (TA)n Simple_repeat Simple_repeat 1 148 0 4 992 7929 112 8 9 chr17 53364073 53366009 -41906642 + L1VL4 LINE L1 188 2123 -1436 4 992 5240 134 11 2 chr17 53365985 53367210 -41905441 + Lx LINE L1 5110 6345 -309 4 992 6082 237 38 34 chr17 53367266 53368792 -41903859 + Lx7 LINE L1 5592 7123 -573 4 992 2862 205 86 57 chr17 53368797 53369531 -41903120 + Lx7 LINE L1 6942 7696 0 4 992 1388 171 85 7 chr17 53369532 53369827 -41902824 - Lx9 LINE L1 -18 7626 7309 4 992 664 295 23 6 chr17 53370439 53370613 -41902038 - B3A SINE B2 -17 181 5 4 992 1459 83 16 5 chr17 53370923 53371116 -41901535 + B2_Mm2 SINE B2 1 195 0 4 992 401 312 140 35 chr17 53371637 53372101 -41900550 + L1_Rod LINE L1 1530 2042 -3838 4 992 1695 280 96 30 chr17 53372138 53373146 -41899505 + Lx8 LINE L1 6393 7467 -6 4 992 9390 11 0 0 chr17 53373568 53374610 -41898041 - L1Md_T LINE L1 0 5883 4842 4 992 6327 43 0 0 chr17 53374610 53375324 -41897327 + L1Md_T LINE L1 5869 6582 0 4 992 2729 194 29 59 chr17 53375402 53375443 -41897208 - RMER19C LTR ERVK 0 611 575 4 992 3043 21 0 17 chr17 53375443 53375790 -41896861 - L1Md_F3 LINE L1 -14 6570 6230 4 992 2729 194 29 59 chr17 53375790 53376377 -41896274 - RMER19C LTR ERVK -37 574 2 4 992 528 269 11 56 chr17 53376662 53376841 -41895810 - Lx8 LINE L1 -517 6956 6775 4 992 1019 333 52 14 chr17 53376845 53377268 -41895383 - Lx8 LINE L1 -833 6640 6202 4 992 1283 61 0 0 chr17 53377315 53377462 -41895189 - B1_Mus1 SINE Alu 0 148 2 4 992 225 139 0 0 chr17 53377485 53377528 -41895123 + (GA)n Simple_repeat Simple_repeat 1 43 0 4 992 671 180 229 85 chr17 53377772 53377871 -41894780 - B3 SINE B2 0 216 89 4 992 4991 24 0 0 chr17 53377871 53378410 -41894241 + L1Md_A LINE L1 6044 6582 0 4 992 671 180 229 85 chr17 53378410 53378498 -41894153 - B3 SINE B2 -128 88 2 4 992 516 275 9 0 chr17 53379663 53379772 -41892879 + B3 SINE B2 90 199 -17 4 992 357 243 117 13 chr17 53380905 53381032 -41891619 - MTEb LTR MaLR -14 405 244 4 992 339 301 90 60 chr17 53381101 53381267 -41891384 - MTEb LTR MaLR -157 222 52 4 992 855 257 73 82 chr17 53381281 53381718 -41890933 + MYSERV16_I-int LTR ERVK 441 873 -1453 4 992 537 275 30 0 chr17 53381718 53381849 -41890802 - B1F SINE Alu -13 136 2 4 992 548 304 34 20 chr17 53381924 53382072 -41890579 + RSINE1 SINE B4 3 152 -13 4 992 623 94 10 0 chr17 53382078 53382174 -41890477 + (TAGA)n Simple_repeat Simple_repeat 1 97 0 4 992 242 208 19 0 chr17 53382872 53382925 -41889726 + MLT1G3 LTR MaLR 515 568 -27 4 992 2007 114 35 16 chr17 53384477 53384790 -41887861 + ORR1A4 LTR MaLR 3 321 -8 4 992 695 223 21 7 chr17 53384885 53385025 -41887626 + B3 SINE B2 1 142 -74 4 992 235 183 131 16 chr17 53385051 53385112 -41887539 + Lx8 LINE L1 7404 7471 -2 4 992 644 72 36 9 chr17 53386131 53386243 -41886408 + (GAAA)n Simple_repeat Simple_repeat 3 117 0 4 992 1151 112 6 0 chr17 53386840 53387019 -41885632 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 992 396 0 0 0 chr17 53387445 53387489 -41885162 + (GA)n Simple_repeat Simple_repeat 1 44 0 4 992 477 0 0 0 chr17 53389144 53389197 -41883454 + (TTTA)n Simple_repeat Simple_repeat 3 55 0 4 992 180 125 0 0 chr17 53389357 53389389 -41883262 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4 992 189 74 0 0 chr17 53389678 53389705 -41882946 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 992 24 85 0 0 chr17 53389830 53389889 -41882762 + AT_rich Low_complexity Low_complexity 1 59 0 4 992 1472 234 89 8 chr17 53390034 53390392 -41882259 - MTD LTR MaLR 0 419 33 4 992 291 291 106 0 chr17 53390415 53390556 -41882095 - Lx8 LINE L1 -86 7387 7232 4 992 189 107 0 0 chr17 53391071 53391099 -41881552 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 4 992 270 0 0 0 chr17 53391618 53391648 -41881003 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 992 265 222 63 0 chr17 53391659 53391722 -41880929 - B4 SINE B4 -54 238 172 4 992 1651 206 13 16 chr17 53391820 53392136 -41880515 + RMER12 LTR ERVK 1 315 -1007 4 992 3207 135 29 21 chr17 53392283 53392805 -41879846 - Lx2 LINE L1 -12 6985 6460 4 992 4647 99 37 7 chr17 53392806 53393566 -41879085 - MusHAL1 LINE L1 -688 2024 1242 4 992 987 196 43 43 chr17 53393625 53393859 -41878792 - MTD LTR MaLR 0 419 186 4 992 934 239 48 5 chr17 53393892 53394081 -41878570 + B3 SINE B2 9 205 -11 4 992 469 282 26 0 chr17 53394103 53394220 -41878431 - MTD LTR MaLR -299 120 1 4 992 237 273 133 22 chr17 53394366 53394456 -41878195 + PB1D10 SINE Alu 4 103 -14 4 992 235 371 0 0 chr17 53394645 53394707 -41877944 + MLT1G LTR MaLR 66 127 -464 4 992 612 101 0 63 chr17 53394980 53395073 -41877578 + L1Md_F2 LINE L1 6452 6542 -40 4 992 218 56 0 27 chr17 53395073 53395110 -41877541 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 4 992 612 101 0 63 chr17 53395110 53395143 -41877508 + L1Md_F2 LINE L1 6543 6570 -12 4 992 1267 220 53 21 chr17 53395477 53395760 -41876891 - MT2A LTR ERVL -166 367 76 4 992 1064 232 175 16 chr17 53395754 53396074 -41876577 - MTE2b LTR MaLR -8 371 1 4 992 389 250 229 7 chr17 53396100 53396147 -41876504 - B3 SINE B2 -6 187 116 4 992 660 59 0 0 chr17 53396147 53396232 -41876419 + (TG)n Simple_repeat Simple_repeat 2 86 0 4 992 389 274 110 8 chr17 53396232 53396337 -41876314 - B3 SINE B2 -101 115 2 4 992 264 346 39 0 chr17 53396409 53396487 -41876164 + ID4 SINE ID 2 82 -1 4 992 3995 47 8 4 chr17 53396526 53397016 -41875635 - L1Md_F2 LINE L1 0 6582 6091 4 992 211 28 56 0 chr17 53397471 53397507 -41875144 + (CATAT)n Simple_repeat Simple_repeat 5 42 0 4 992 341 350 6 53 chr17 53397587 53397756 -41874895 - RSINE1 SINE B4 -1 164 4 4 992 811 264 40 5 chr17 53398707 53398905 -41873746 - B3 SINE B2 -11 205 1 4 992 9164 2 0 0 chr17 53399155 53400220 -41872431 + L1Md_A LINE L1 4522 5586 -297 4 992 8959 8 0 0 chr17 53400220 53401256 -41871395 + L1Md_A LINE L1 5587 6582 0 4 992 614 286 95 84 chr17 53401538 53401963 -41870688 + RMER20B LTR ERVK 96 570 -57 4 992 189 0 0 0 chr17 53402161 53402182 -41870469 + (A)n Simple_repeat Simple_repeat 1 21 0 4 992 5443 121 40 22 chr17 53402190 53403425 -41869226 + Lx3_Mus LINE L1 5426 6648 -6 4 992 194 33 67 0 chr17 53403445 53403475 -41869176 + (CAAAAA)n Simple_repeat Simple_repeat 3 34 0 4 992 4447 92 8 0 chr17 53403484 53404096 -41868555 + Lx3_Mus LINE L1 6393 7009 0 4 992 28 0 0 0 chr17 53404212 53404240 -41868411 + AT_rich Low_complexity Low_complexity 1 28 0 4 992 1591 296 40 88 chr17 53405367 53406480 -41866171 - L1_Mur3 LINE L1 -1153 4727 3669 4 992 455 261 39 42 chr17 53406477 53406690 -41865961 + L1_Rod LINE L1 2777 3014 -2833 4 992 207 0 0 0 chr17 53406690 53406713 -41865938 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 4 992 455 255 39 44 chr17 53406713 53406742 -41865909 + L1_Rod LINE L1 3015 3037 -2810 4 992 2067 236 35 37 chr17 53406749 53407294 -41865357 + Lx6 LINE L1 6912 7455 -5 4 992 473 223 48 54 chr17 53407787 53407934 -41864717 + L1M2 LINE L1 3029 3174 -2969 4 992 350 175 12 0 chr17 53408022 53408102 -41864549 + (TA)n Simple_repeat Simple_repeat 1 81 0 4 992 771 254 6 0 chr17 53408157 53408330 -41864321 + Lx8 LINE L1 6300 6473 -1000 4 992 1172 280 138 0 chr17 53408332 53408789 -41863862 + Lx8 LINE L1 6818 7337 -136 4 992 213 186 0 44 chr17 53409243 53409288 -41863363 + T-rich Low_complexity Low_complexity 1 43 0 4 992 370 280 86 0 chr17 53409290 53409383 -41863268 - PB1D7 SINE Alu -8 112 12 4 992 415 277 75 23 chr17 53409458 53409591 -41863060 - B1F SINE Alu -9 140 1 4 992 206 395 48 0 chr17 53409682 53409806 -41862845 - L2a LINE L2 -90 3336 3207 4 992 272 300 0 0 chr17 53410057 53410127 -41862524 - tRNA-Ala-GCY_ tRNA tRNA -3 72 3 5 992 201 138 0 0 chr17 53410147 53410176 -41862475 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 992 221 0 35 0 chr17 53410227 53410256 -41862395 + (CACAC)n Simple_repeat Simple_repeat 2 31 0 5 992 249 204 105 66 chr17 53411465 53411617 -41861034 + L1M2 LINE L1 5138 5295 -845 4 992 757 342 34 51 chr17 53411740 53412036 -41860615 + B4A SINE B4 2 292 0 5 992 225 0 0 0 chr17 53412036 53412061 -41860590 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 992 411 21 0 0 chr17 53412061 53412109 -41860542 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 992 504 259 131 13 chr17 53412126 53412357 -41860294 + L1M2 LINE L1 5491 5748 -420 4 992 5511 55 1 1 chr17 53412363 53413089 -41859562 + L1_Mm LINE L1 4921 5646 -237 5 992 1042 167 4 22 chr17 53413090 53413317 -41859334 - L1VL1 LINE L1 -6199 223 1 5 992 36481 40 1 3 chr17 53413333 53419550 -41853101 - L1Md_T LINE L1 0 6585 288 5 992 476 214 197 0 chr17 53419550 53419667 -41852984 + B3A SINE B2 32 171 -27 5 992 257 267 13 39 chr17 53419777 53419846 -41852805 + MER5A1 DNA MER1_type 46 113 -53 5 992 820 232 19 33 chr17 53419846 53420060 -41852591 + B3 SINE B2 3 213 -3 5 992 399 68 0 0 chr17 53420745 53420804 -41851847 + (GA)n Simple_repeat Simple_repeat 2 60 0 5 992 315 336 54 54 chr17 53420804 53420933 -41851718 - ID_B1 SINE B4 -12 212 84 5 992 372 152 0 0 chr17 53420939 53421005 -41851646 + T-rich Low_complexity Low_complexity 3 68 0 5 992 3586 143 51 19 chr17 53421131 53421796 -41850855 - Lx LINE L1 0 6654 5969 5 992 3901 206 69 28 chr17 53421796 53422660 -41849991 + RMER13B LTR ERVK 2 901 -7 5 992 21626 167 23 22 chr17 53422666 53425492 -41847159 - Lx LINE L1 -1019 5978 3136 5 992 309 51 0 0 chr17 53425492 53425531 -41847120 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 992 21626 158 23 18 chr17 53425531 53428134 -41844517 - Lx LINE L1 -2751 3135 555 5 992 576 295 140 10 chr17 53428150 53428458 -41844193 - L1MA5 LINE L1 -56 6244 5897 5 992 267 344 76 19 chr17 53428718 53428875 -41843776 + MER5B DNA MER1_type 2 167 -11 5 992 193 53 79 0 chr17 53429478 53429516 -41843135 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 5 992 721 187 18 7 chr17 53429516 53429660 -41842991 - B1_Mus1 SINE Alu 0 149 9 5 992 868 48 8 7 chr17 53429703 53429825 -41842826 + B1_Mm SINE Alu 32 147 0 5 992 850 224 43 19 chr17 53430086 53430295 -41842356 + B3 SINE B2 1 214 -2 5 992 2919 221 98 37 chr17 53430464 53431550 -41841101 + RMER1B Other Other 44 952 -114 5 992 405 0 0 0 chr17 53431550 53431595 -41841056 + (TTG)n Simple_repeat Simple_repeat 1 45 0 5 992 2919 204 81 25 chr17 53431595 53431709 -41840942 + RMER1B Other Other 896 1050 -16 5 992 557 226 9 9 chr17 53433021 53433137 -41839514 + PB1D10 SINE Alu 1 116 -1 5 992 457 271 101 0 chr17 53433147 53433276 -41839375 + B1_Mur1 SINE Alu 5 146 -3 5 992 192 232 95 95 chr17 53433452 53433547 -41839104 + L2 LINE L2 2265 2359 -1060 5 992 435 269 48 167 chr17 53433728 53434072 -41838579 + MTEa LTR MaLR 20 330 -40 5 992 704 165 0 0 chr17 53434072 53434187 -41838464 + B1_Mur4 SINE Alu 34 148 -2 5 992 522 46 0 0 chr17 53434381 53434446 -41838205 + (CAGGA)n Simple_repeat Simple_repeat 1 65 0 5 992 284 130 0 36 chr17 53434489 53434545 -41838106 + GA-rich Low_complexity Low_complexity 3 56 0 5 992 888 136 15 110 chr17 53434545 53434817 -41837834 - RMER17C LTR ERVK -164 246 1 5 992 925 271 16 0 chr17 53435738 53435930 -41836721 + B3 SINE B2 1 195 -21 5 992 516 272 94 21 chr17 53436262 53436495 -41836156 + RMER5 LTR ERV1 1 250 -284 5 992 1129 71 0 6 chr17 53436609 53436766 -41835885 - B2_Mm2 SINE B2 -38 157 2 5 992 456 314 124 0 chr17 53436798 53436935 -41835716 - RSINE1 SINE B4 -3 162 9 5 992 212 286 32 0 chr17 53436945 53437008 -41835643 + CT-rich Low_complexity Low_complexity 2 66 0 5 992 371 292 107 19 chr17 53437132 53437348 -41835303 - L1_Rod LINE L1 -3937 1910 1676 5 992 432 0 0 0 chr17 53437371 53437419 -41835232 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 992 1067 139 40 0 chr17 53437496 53437669 -41834982 + B2_Mm2 SINE B2 3 182 -13 5 992 434 302 101 37 chr17 53437677 53437945 -41834706 + Lx8 LINE L1 7182 7466 -7 5 992 406 278 78 63 chr17 53437946 53438096 -41834555 + L1_Mur3 LINE L1 4266 4408 -1732 5 992 610 245 42 61 chr17 53438096 53438261 -41834390 + RSINE1 SINE B4 4 165 0 5 992 387 0 0 0 chr17 53438263 53438306 -41834345 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 5 992 406 283 93 42 chr17 53438306 53438421 -41834230 + L1_Mur3 LINE L1 4382 4510 -1370 5 992 762 265 86 24 chr17 53438560 53438815 -41833836 - RMER21A LTR ERV1 -258 689 419 5 992 321 344 24 8 chr17 53438815 53438941 -41833710 - RMER21A LTR ERV1 -629 213 86 5 992 517 279 122 40 chr17 53438946 53439346 -41833305 + L1M2 LINE L1 4549 4981 -1162 5 992 182 108 54 0 chr17 53439382 53439419 -41833232 + (CATA)n Simple_repeat Simple_repeat 2 40 0 5 992 2285 165 110 76 chr17 53439465 53439686 -41832965 + RLTR31A_Mm LTR ERVK 1 218 -366 5 992 1885 148 3 13 chr17 53439686 53440000 -41832651 - RLTR10E LTR ERVK 0 311 1 5 992 2285 165 110 76 chr17 53440000 53440343 -41832308 + RLTR31A_Mm LTR ERVK 219 584 0 5 992 381 276 29 36 chr17 53440386 53440525 -41832126 + Lx8 LINE L1 6474 6611 -862 5 992 23 33 0 0 chr17 53442752 53442782 -41829869 + AT_rich Low_complexity Low_complexity 1 30 0 5 992 908 207 38 24 chr17 53443012 53443225 -41829426 + B3 SINE B2 1 216 0 5 992 329 58 19 0 chr17 53443888 53443940 -41828711 + (TTG)n Simple_repeat Simple_repeat 2 54 0 5 992 1210 34 0 20 chr17 53443940 53444079 -41828572 - B1_Mus2 SINE Alu -8 139 1 5 992 819 270 100 88 chr17 53444113 53444442 -41828209 - RLTR14 LTR ERV1 -49 333 1 5 992 519 319 20 72 chr17 53444442 53444888 -41827763 - RLTR14-int LTR ERV1 -1 5316 4894 5 992 802 324 83 57 chr17 53445460 53446209 -41826442 - RLTR14-int LTR ERV1 -1356 3961 3194 5 992 336 296 78 26 chr17 53446598 53446789 -41825862 - MURVY-int LTR ERV1 -3220 4232 4032 5 992 921 196 11 6 chr17 53447653 53447827 -41824824 + ORR1C2 LTR MaLR 1 175 -209 5 992 260 291 0 44 chr17 53447827 53447917 -41824734 + ORR1C2 LTR MaLR 282 367 0 5 992 1988 149 43 16 chr17 53447867 53448243 -41824408 - ORR1B1 LTR MaLR 0 394 9 5 992 1096 271 90 20 chr17 53448666 53449023 -41823628 - RLTR14 LTR ERV1 0 382 1 5 992 1200 46 0 0 chr17 53449036 53449187 -41823464 + (CCA)n Simple_repeat Simple_repeat 2 152 0 5 992 24 0 0 0 chr17 53449244 53449268 -41823383 + AT_rich Low_complexity Low_complexity 1 24 0 5 992 323 270 128 20 chr17 53449318 53449420 -41823231 + B1F SINE Alu 6 118 -31 5 992 221 57 29 0 chr17 53449429 53449464 -41823187 + (CAAA)n Simple_repeat Simple_repeat 3 38 0 5 992 244 291 96 59 chr17 53450087 53450222 -41822429 + MLT1G3 LTR MaLR 442 581 -14 5 992 876 89 0 0 chr17 53450663 53450786 -41821865 + (TG)n Simple_repeat Simple_repeat 2 124 0 5 992 787 217 52 47 chr17 53450833 53451026 -41821625 - B3A SINE B2 -1 197 4 5 992 614 240 59 40 chr17 53451584 53451736 -41820915 - B3A SINE B2 -42 156 2 5 992 2659 216 10 13 chr17 53451788 53452413 -41820238 + L1VL4 LINE L1 207 829 -5473 5 992 2637 84 3 3 chr17 53452408 53452776 -41819875 + L1Md_F2 LINE L1 6119 6486 -96 5 992 4915 101 63 0 chr17 53452775 53453535 -41819116 + L1Md_T LINE L1 398 1205 -5411 5 992 34272 34 3 0 chr17 53453503 53457970 -41814681 + L1Md_T LINE L1 1108 5586 -297 5 992 8421 35 1 0 chr17 53457970 53458965 -41813686 + L1Md_T LINE L1 5587 6582 0 5 992 498 110 0 39 chr17 53458963 53459067 -41813584 + L1Md_F2 LINE L1 6471 6570 -12 5 992 9190 97 14 6 chr17 53459067 53460636 -41812015 + MusHAL1 LINE L1 616 2197 -1156 5 992 509 73 0 0 chr17 53460630 53460698 -41811953 + L1_Mus3 LINE L1 4825 4892 -991 5 992 466 167 29 0 chr17 53460697 53460799 -41811852 + L1_Mur1 LINE L1 5009 5113 -773 5 992 6187 91 86 12 chr17 53460799 53461848 -41810803 + L1_Mus3 LINE L1 5507 6632 -6 5 992 180 286 0 0 chr17 53462413 53462455 -41810196 + L3b LINE CR1 16 57 -425 5 992 247 305 84 12 chr17 53463425 53463508 -41809143 + MLT1E1A LTR MaLR 142 230 -450 5 992 657 56 0 0 chr17 53463626 53463716 -41808935 + (TTGG)n Simple_repeat Simple_repeat 2 91 0 5 992 540 0 0 0 chr17 53463730 53463790 -41808861 + (GTTTG)n Simple_repeat Simple_repeat 2 61 0 5 992 232 0 0 95 chr17 53463880 53463922 -41808729 + (ATAAG)n Simple_repeat Simple_repeat 2 39 0 5 992 257 254 206 0 chr17 53464129 53464192 -41808459 + ID4 SINE ID 6 81 -2 5 992 417 218 0 54 chr17 53464193 53464285 -41808366 + B4A SINE B4 1 87 -205 5 992 473 370 0 21 chr17 53464303 53464444 -41808207 + RSINE1 SINE B4 4 141 -24 5 992 351 0 0 0 chr17 53464446 53464485 -41808166 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 992 970 104 13 0 chr17 53464486 53464640 -41808011 + (TGGA)n Simple_repeat Simple_repeat 3 158 0 5 992 436 330 59 40 chr17 53464792 53465064 -41807587 - RLTR12B LTR ERVK -10 518 242 5 992 810 268 60 57 chr17 53465042 53465359 -41807292 - RLTR12B LTR ERVK -194 334 17 5 992 1275 96 10 50 chr17 53465585 53465783 -41806868 + B2_Mm1t SINE B2 2 191 -2 5 992 335 293 21 13 chr17 53465783 53465876 -41806775 + B3A SINE B2 12 112 -104 5 992 328 237 58 22 chr17 53466297 53466435 -41806216 + Lx6 LINE L1 6027 6169 -1291 5 992 5465 80 100 12 chr17 53466434 53467274 -41805377 + L1_Mus3 LINE L1 5724 6637 -1 5 992 1580 325 52 33 chr17 53467312 53468165 -41804486 + Lx8 LINE L1 6490 7358 -115 5 992 685 176 0 0 chr17 53468183 53468291 -41804360 - RMER10B LTR ERVL -46 352 245 5 992 781 97 7 7 chr17 53468298 53468433 -41804218 + (GA)n Simple_repeat Simple_repeat 2 136 0 5 992 377 238 208 24 chr17 53468516 53468626 -41804025 + MTD LTR MaLR 193 325 -94 5 992 1787 179 43 52 chr17 53468626 53469069 -41803582 + RMER17B LTR ERVK 1 439 -519 5 992 2369 203 39 47 chr17 53469102 53469717 -41802934 + RMER13B LTR ERVK 257 866 -42 5 992 383 180 67 11 chr17 53469728 53469818 -41802833 + MTD LTR MaLR 317 411 -8 5 992 276 228 337 0 chr17 53469817 53469909 -41802742 + B1_Mur1 SINE Alu 19 141 -8 5 992 232 250 0 30 chr17 53470109 53470175 -41802476 + RLTR19C LTR ERVK 32 95 -411 5 992 31 0 0 0 chr17 53470677 53470708 -41801943 + AT_rich Low_complexity Low_complexity 1 31 0 5 992 459 0 0 0 chr17 53470714 53470765 -41801886 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 992 668 135 289 26 chr17 53470766 53470918 -41801733 - Lx4A LINE L1 -128 6930 6739 6 992 248 228 35 0 chr17 53470927 53470984 -41801667 + GA-rich Low_complexity Low_complexity 3 61 0 6 992 358 62 46 0 chr17 53471726 53471791 -41800860 + (TTTTG)n Simple_repeat Simple_repeat 3 70 0 6 992 638 142 84 9 chr17 53471796 53471903 -41800748 - B1_Mus2 SINE Alu -1 146 32 6 992 255 31 0 0 chr17 53471912 53471944 -41800707 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 992 417 198 206 5 chr17 53471946 53472047 -41800604 - Lx9 LINE L1 -53 7420 7335 6 992 303 28 0 0 chr17 53472047 53472083 -41800568 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 992 1478 252 21 52 chr17 53472083 53472569 -41800082 - Lx9 LINE L1 -189 7455 6844 6 992 276 100 0 0 chr17 53472577 53472617 -41800034 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 6 992 1249 98 17 0 chr17 53472617 53472790 -41799861 - B2_Mm2 SINE B2 -18 177 2 6 992 480 206 75 0 chr17 53472791 53472898 -41799753 - Lx9 LINE L1 -647 6997 6883 6 992 236 286 0 0 chr17 53472934 53472990 -41799661 - Lx9 LINE L1 -874 6770 6715 6 992 496 279 83 6 chr17 53473778 53473954 -41798697 + MLT1A LTR MaLR 1 198 -192 6 992 859 178 135 10 chr17 53473989 53474144 -41798507 + ORR1C1 LTR MaLR 1 172 -206 6 992 812 10 10 0 chr17 53474144 53474241 -41798410 + (TC)n Simple_repeat Simple_repeat 1 98 0 6 992 859 178 135 10 chr17 53474241 53474271 -41798380 + ORR1C1 LTR MaLR 173 210 -168 6 992 2511 150 78 35 chr17 53474271 53474809 -41797842 - RLTR31_Mm LTR ERVK 0 561 1 6 992 989 172 94 0 chr17 53474809 53474981 -41797670 + ORR1C1 LTR MaLR 190 378 0 6 992 200 86 29 0 chr17 53475217 53475252 -41797399 + (CCA)n Simple_repeat Simple_repeat 2 37 0 6 992 261 241 198 27 chr17 53475585 53475696 -41796955 + MLT1A LTR MaLR 245 374 0 6 992 507 318 0 86 chr17 53476062 53476193 -41796458 - RSINE1 SINE B4 -5 160 43 6 992 1794 171 47 3 chr17 53476193 53476533 -41796118 - RLTR15 LTR ERVK 0 359 5 6 992 507 318 0 86 chr17 53476533 53476563 -41796088 - RSINE1 SINE B4 -123 42 13 6 992 345 133 0 0 chr17 53476576 53476651 -41796000 + (TTG)n Simple_repeat Simple_repeat 3 77 0 6 992 257 357 39 83 chr17 53476651 53476807 -41795844 - B4A SINE B4 -113 179 31 6 992 430 243 0 0 chr17 53476847 53476921 -41795730 - ID4 SINE ID -8 75 2 6 992 718 150 19 9 chr17 53476922 53477049 -41795602 + ORR1A2 LTR MaLR 1 134 -236 6 992 341 107 0 0 chr17 53477051 53477107 -41795544 + L1_Mm LINE L1 2068 2123 -3760 6 992 305 322 0 0 chr17 53477255 53477342 -41795309 - PB1D10 SINE Alu -2 115 29 6 993 1100 142 12 20 chr17 53478395 53478640 -41794011 + MusHAL1 LINE L1 262 504 -2208 6 993 344 129 0 0 chr17 53478640 53478702 -41793949 + L1_Mus2 LINE L1 6490 6551 -15 6 993 864 114 0 0 chr17 53478709 53478840 -41793811 + (GAAA)n Simple_repeat Simple_repeat 2 132 0 6 993 14315 177 69 14 chr17 53479064 53479430 -41793221 + L1_Mur1 LINE L1 1704 2070 -3816 6 993 378 0 0 0 chr17 53479430 53479472 -41793179 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 6 993 14315 177 69 14 chr17 53479472 53480834 -41791817 + L1_Mur1 LINE L1 2071 3479 -2407 6 993 224 0 65 0 chr17 53480834 53480865 -41791786 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 6 993 14315 177 69 14 chr17 53480865 53482164 -41790487 + L1_Mur1 LINE L1 3480 4917 -969 6 993 2259 51 0 0 chr17 53482164 53482440 -41790211 + L1Md_T LINE L1 6307 6582 0 6 993 14315 177 69 14 chr17 53482440 53482660 -41789991 + L1_Mur1 LINE L1 4918 5129 -757 6 993 4337 67 2 1 chr17 53482652 53483265 -41789386 - L1_Mus1 LINE L1 -258 6309 5689 6 993 624 143 122 16 chr17 53483272 53483431 -41789220 + B2_Mm2 SINE B2 4 181 -12 6 993 22 35 0 0 chr17 53483451 53483480 -41789171 + AT_rich Low_complexity Low_complexity 1 29 0 6 993 2500 85 10 3 chr17 53484034 53484422 -41788229 - MusHAL1 LINE L1 -627 2085 1695 6 993 582 153 118 24 chr17 53484428 53484555 -41788096 + B2_Mm2 SINE B2 49 187 -8 6 993 3359 79 28 4 chr17 53484572 53485041 -41787610 - L1_Mus3 LINE L1 0 6638 6159 6 993 1333 66 0 0 chr17 53485041 53485222 -41787429 + L1_Mus4 LINE L1 5660 5840 -796 6 993 300 316 53 0 chr17 53485940 53486054 -41786597 - Lx8 LINE L1 -296 7177 7058 6 993 248 206 12 42 chr17 53486140 53486243 -41786408 + T-rich Low_complexity Low_complexity 1 99 0 6 993 212 328 90 0 chr17 53486249 53486316 -41786335 - B1F SINE Alu -71 78 6 6 993 336 143 0 0 chr17 53486644 53486700 -41785951 + (A)n Simple_repeat Simple_repeat 1 56 0 6 993 684 24 0 0 chr17 53486806 53486888 -41785763 + (TG)n Simple_repeat Simple_repeat 1 82 0 6 993 679 268 36 0 chr17 53486899 53487037 -41785614 - B3A SINE B2 -53 145 3 6 993 324 263 0 0 chr17 53487615 53487672 -41784979 + ID4_ SINE ID 14 70 -13 6 993 1241 274 72 28 chr17 53487728 53487944 -41784707 + MTD LTR MaLR 1 222 -197 6 993 1988 95 108 0 chr17 53487944 53488239 -41784412 - ORR1A2 LTR MaLR 0 327 1 6 993 1241 274 43 39 chr17 53488239 53488426 -41784225 + MTD LTR MaLR 223 404 -15 6 993 907 254 106 38 chr17 53489006 53489542 -41783109 - L1M2 LINE L1 -1828 4315 3745 6 993 324 0 0 0 chr17 53489553 53489589 -41783062 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 993 396 200 25 0 chr17 53489592 53489672 -41782979 - B3A SINE B2 -114 84 3 6 993 279 186 17 0 chr17 53489673 53489732 -41782919 - L1M2 LINE L1 -2355 3788 3729 6 993 2118 184 5 8 chr17 53489757 53490134 -41782517 + RLTR14 LTR ERV1 7 382 0 6 993 301 350 50 10 chr17 53491086 53491187 -41781464 + PB1D7 SINE Alu 1 105 -15 6 993 338 203 16 16 chr17 53491188 53491313 -41781338 + GA-rich Low_complexity Low_complexity 1 125 0 6 993 860 329 40 57 chr17 53491493 53491861 -41780790 + MTE2a LTR MaLR 1 368 -51 6 993 261 130 0 80 chr17 53491861 53491911 -41780740 - MT2A LTR ERVL 0 533 488 6 993 5886 88 12 57 chr17 53491917 53493792 -41778859 + L1VL2 LINE L1 85 1859 -1756 6 993 6894 87 41 6 chr17 53494544 53495650 -41777001 + L1VL2 LINE L1 1845 2988 -627 6 993 29 47 0 0 chr17 53496204 53496247 -41776404 + AT_rich Low_complexity Low_complexity 1 43 0 6 993 280 173 0 51 chr17 53496280 53496359 -41776292 + (TATG)n Simple_repeat Simple_repeat 4 78 0 6 993 640 317 114 94 chr17 53496386 53496584 -41776067 - MT2B LTR ERVL -40 561 214 6 993 829 133 0 0 chr17 53496584 53496704 -41775947 + B2_Mm2 SINE B2 42 161 -34 6 993 225 0 0 0 chr17 53496704 53496729 -41775922 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 6 993 640 317 114 94 chr17 53496729 53496960 -41775691 - MT2B LTR ERVL -388 213 2 6 993 256 275 24 24 chr17 53497033 53497115 -41775536 - ORR1E LTR MaLR -277 82 1 6 993 573 251 92 39 chr17 53497435 53497771 -41774880 + Charlie4a DNA MER1_type 61 414 -94 6 993 438 292 60 30 chr17 53497968 53498102 -41774549 + RSINE1 SINE B4 2 139 -26 6 993 246 105 0 0 chr17 53498116 53498154 -41774497 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 993 23 0 0 0 chr17 53498154 53498177 -41774474 + AT_rich Low_complexity Low_complexity 1 23 0 6 993 241 316 25 0 chr17 53498382 53498461 -41774190 - ID4_ SINE ID -2 81 1 6 993 359 295 0 64 chr17 53498899 53498993 -41773658 - B4A SINE B4 -3 289 202 6 993 764 265 0 5 chr17 53498993 53499179 -41773472 - Lx6 LINE L1 -33 7427 7243 6 993 8320 200 59 5 chr17 53501378 53501529 -41771122 - Lx6 LINE L1 -176 7284 7130 1 993 405 0 0 0 chr17 53501529 53501574 -41771077 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 993 8320 195 53 9 chr17 53501574 53503503 -41769148 - Lx6 LINE L1 -331 7129 5117 1 993 296 317 27 40 chr17 53503762 53503910 -41768741 - RLTR17 LTR ERVK -265 427 282 3 993 583 268 39 29 chr17 53503909 53504113 -41768538 - RLTR16 LTR ERVK -299 206 1 4 993 769 184 6 24 chr17 53504113 53504280 -41768371 - Lx6 LINE L1 -758 5122 4959 1 993 4426 16 6 0 chr17 53504297 53504787 -41767864 - MT2_Mm LTR ERVL 0 493 1 5 993 321 0 0 0 chr17 53504787 53504825 -41767826 - MERVL-int LTR ERVL 0 5485 5448 5 993 339 125 26 53 chr17 53504825 53504901 -41767750 - ORR1A3-int LTR MaLR -1323 640 567 6 993 8808 32 1 0 chr17 53504901 53505905 -41766746 - MERVL-int LTR ERVL -114 5371 4367 5 993 14103 22 0 0 chr17 53505905 53507471 -41765180 - MERVL-int LTR ERVL -540 4945 3380 7 993 3101 82 82 0 chr17 53507471 53507910 -41764741 + IAPLTR2_Mm LTR ERVK 1 475 0 8 993 3759 84 19 36 chr17 53507911 53508745 -41763906 + IAPEz-int LTR ERVK 9 662 -5819 8 993 962 59 0 0 chr17 53508745 53508864 -41763787 + IAPEz-int LTR ERVK 1359 1477 -5004 8 993 1927 82 4 0 chr17 53508865 53509110 -41763541 + IAPEz-int LTR ERVK 2252 2497 -5183 8 993 14619 50 7 3 chr17 53509137 53510901 -41761750 + IAPEz-int LTR ERVK 4708 6479 -2 9 993 3075 77 81 16 chr17 53510903 53511349 -41761302 + IAPLTR2_Mm LTR ERVK 1 475 0 9 993 19433 13 18 0 chr17 53511349 53513486 -41759165 - MERVL-int LTR ERVL -2100 3385 1210 1 993 2070 22 0 0 chr17 53513484 53513715 -41758936 - MERVL-int LTR ERVL -5254 231 1 1 993 4391 14 6 12 chr17 53513715 53514211 -41758440 - MT2_Mm LTR ERVL 0 493 1 1 993 1091 97 0 0 chr17 53514211 53514366 -41758285 - B2_Mm2 SINE B2 -40 155 1 1 993 1791 167 72 13 chr17 53514366 53514607 -41758044 - Lx6 LINE L1 -887 4993 4733 1 993 243 0 0 0 chr17 53514607 53514634 -41758017 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 993 1791 167 72 13 chr17 53514634 53514781 -41757870 - Lx6 LINE L1 -1148 4732 4583 1 993 262 175 16 0 chr17 53514785 53514848 -41757803 + L1_Mur3 LINE L1 3346 3409 -2471 1 993 235 132 0 0 chr17 53514859 53514897 -41757754 + Lx7 LINE L1 6274 6311 -1385 1 993 3518 216 82 3 chr17 53514922 53515687 -41756964 + Lx7 LINE L1 6367 7192 -504 1 993 7442 204 53 29 chr17 53516016 53517726 -41754925 - Lx6 LINE L1 -189 7271 5520 1 993 34092 82 24 13 chr17 53517771 53523082 -41749569 + L1_Mur1 LINE L1 208 5877 -9 1 993 4043 112 17 2 chr17 53523083 53523680 -41748971 + Lx3_Mus LINE L1 6396 7001 -8 1 993 28 0 0 0 chr17 53523680 53523708 -41748943 + AT_rich Low_complexity Low_complexity 1 28 0 1 993 1504 226 69 33 chr17 53523708 53524128 -41748523 + Lx7 LINE L1 7260 7694 -2 1 993 261 0 0 0 chr17 53524655 53524684 -41747967 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 993 5408 69 11 4 chr17 53524684 53525485 -41747166 - RLTR13C2 LTR ERVK -2 981 1 2 993 432 357 54 37 chr17 53525750 53526047 -41746604 + MT2A LTR ERVL 134 435 -98 2 993 391 243 28 55 chr17 53527027 53527136 -41745515 + B1F SINE Alu 29 134 -15 2 993 510 61 0 0 chr17 53527137 53527203 -41745448 + (TAGA)n Simple_repeat Simple_repeat 1 66 0 2 993 21 0 0 0 chr17 53527254 53527275 -41745376 + AT_rich Low_complexity Low_complexity 1 21 0 2 993 334 263 35 35 chr17 53527796 53527969 -41744682 + CT-rich Low_complexity Low_complexity 2 174 0 2 993 581 81 23 0 chr17 53527969 53528056 -41744595 + (TCCCC)n Simple_repeat Simple_repeat 3 91 0 2 993 476 232 87 8 chr17 53528984 53529110 -41743541 + B3 SINE B2 81 216 0 2 993 15310 88 7 33 chr17 53529142 53530161 -41742490 + L1_Mus2 LINE L1 3724 4729 -1154 2 993 1212 68 0 0 chr17 53530161 53530308 -41742343 + B1_Mus1 SINE Alu 2 148 0 3 993 15310 74 4 19 chr17 53530308 53532195 -41740456 + L1_Mus2 LINE L1 4730 6565 -1 2 993 21 0 0 0 chr17 53532198 53532219 -41740432 + AT_rich Low_complexity Low_complexity 1 21 0 3 993 337 208 14 14 chr17 53532219 53532292 -41740359 + ID_B1 SINE B4 145 217 -7 3 993 528 291 0 8 chr17 53532389 53532517 -41740134 + RSINE1 SINE B4 3 129 -36 3 993 429 90 0 0 chr17 53532524 53532591 -41740060 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 993 1076 110 0 0 chr17 53534006 53534152 -41738499 + B1_Mus1 SINE Alu 3 148 0 3 993 198 0 0 0 chr17 53534184 53534206 -41738445 + (G)n Simple_repeat Simple_repeat 1 22 0 3 993 304 288 50 0 chr17 53534486 53534566 -41738085 + B1F SINE Alu 39 122 -27 3 993 388 277 11 0 chr17 53534495 53534589 -41738062 + ID_B1 SINE B4 129 223 -1 3 993 200 200 18 0 chr17 53534606 53534661 -41737990 + GA-rich Low_complexity Low_complexity 3 58 0 3 993 336 196 33 150 chr17 53534707 53534778 -41737873 - PB1D10 SINE Alu -3 114 43 4 993 683 24 12 0 chr17 53534778 53534863 -41737788 + (TC)n Simple_repeat Simple_repeat 2 87 0 4 993 1033 94 50 56 chr17 53534863 53535043 -41737608 - B2_Mm2 SINE B2 -15 180 2 4 993 336 196 33 150 chr17 53535043 53535090 -41737561 - PB1D10 SINE Alu -75 42 10 4 993 573 262 6 68 chr17 53535123 53535299 -41737352 - RSINE1 SINE B4 0 165 1 4 993 610 254 23 0 chr17 53535327 53535457 -41737194 + B1F SINE Alu 1 133 -16 4 993 200 167 0 0 chr17 53535474 53535504 -41737147 + polypurine Low_complexity Low_complexity 3 32 0 4 993 588 29 0 0 chr17 53535508 53535578 -41737073 + (GA)n Simple_repeat Simple_repeat 1 70 0 4 993 435 329 90 12 chr17 53535606 53535772 -41736879 - B4 SINE B4 -8 284 106 4 993 1542 58 16 0 chr17 53535920 53536110 -41736541 + B2_Mm2 SINE B2 2 194 -1 4 993 858 192 302 0 chr17 53536410 53536714 -41735937 + Lx9 LINE L1 7239 7635 -9 4 993 1127 235 21 93 chr17 53536746 53537165 -41735486 + MT2B LTR ERVL 66 601 0 5 993 519 17 0 0 chr17 53537212 53537272 -41735379 + (GGGA)n Simple_repeat Simple_repeat 3 62 0 5 993 445 181 21 21 chr17 53537643 53537739 -41734912 - B1F SINE Alu 0 149 54 5 993 235 234 0 0 chr17 53537729 53537776 -41734875 - MTEa LTR MaLR -136 243 197 5 993 36 53 0 0 chr17 53538482 53538539 -41734112 + AT_rich Low_complexity Low_complexity 1 57 0 5 993 598 230 32 0 chr17 53538661 53538787 -41733864 + B1F SINE Alu 9 138 -11 5 993 23 0 0 0 chr17 53538790 53538813 -41733838 + AT_rich Low_complexity Low_complexity 1 23 0 5 993 473 224 46 124 chr17 53538821 53538974 -41733677 + RSINE1 SINE B4 25 165 0 5 993 377 201 11 12 chr17 53539037 53539142 -41733509 + PB1D9 SINE Alu 1 110 -10 5 993 1496 53 10 21 chr17 53539243 53539437 -41733214 + B2_Mm2 SINE B2 2 193 -2 5 993 213 39 0 0 chr17 53539480 53539506 -41733145 + (CTGGGG)n Simple_repeat Simple_repeat 5 30 0 6 993 611 241 119 6 chr17 53539514 53539673 -41732978 + ID_B1 SINE B4 27 203 -21 6 993 403 217 0 21 chr17 53539727 53539821 -41732830 + PB1D10 SINE Alu 24 115 -2 6 993 413 324 7 39 chr17 53539835 53539989 -41732662 + B1F SINE Alu 1 149 0 6 993 669 204 25 70 chr17 53541060 53541218 -41731433 + RSINE1 SINE B4 15 165 0 6 993 212 194 0 0 chr17 53541221 53541257 -41731394 + (TAA)n Simple_repeat Simple_repeat 1 36 0 6 993 493 214 206 37 chr17 53541677 53541813 -41730838 + RSINE1 SINE B4 3 161 -4 6 993 699 240 92 12 chr17 53541939 53542112 -41730539 - B3 SINE B2 -26 190 4 6 993 216 204 20 0 chr17 53542594 53542643 -41730008 + (CAGA)n Simple_repeat Simple_repeat 1 50 0 6 993 202 205 0 0 chr17 53542807 53542846 -41729805 + G-rich Low_complexity Low_complexity 2 40 0 6 993 252 296 0 14 chr17 53543188 53543260 -41729391 + PB1D10 SINE Alu 42 112 -5 7 993 816 152 12 6 chr17 53543271 53543437 -41729214 + GA-rich Low_complexity Low_complexity 2 168 0 7 993 400 300 0 10 chr17 53543724 53543825 -41728826 + PB1D7 SINE Alu 12 111 -9 7 993 30 0 0 0 chr17 53543825 53543855 -41728796 + AT_rich Low_complexity Low_complexity 1 30 0 7 993 390 208 59 81 chr17 53543855 53543991 -41728660 + RSINE1 SINE B4 4 136 -29 7 993 2997 42 53 5 chr17 53544242 53544620 -41728031 + MTA_Mm LTR MaLR 1 396 0 7 993 316 202 60 13 chr17 53545109 53545219 -41727432 - B1F SINE Alu 0 149 1 7 993 477 266 29 7 chr17 53545228 53545368 -41727283 - B1F2 SINE Alu 0 149 7 7 993 1760 5 0 5 chr17 53545524 53545718 -41726933 + B2_Mm1a SINE B2 1 193 0 7 993 675 216 118 26 chr17 53546054 53546249 -41726402 + B3 SINE B2 4 216 0 7 993 457 254 0 48 chr17 53546277 53546401 -41726250 + PB1D9 SINE Alu 1 118 -2 8 993 992 57 0 102 chr17 53546416 53546573 -41726078 + B2_Mm2 SINE B2 3 143 -52 8 993 390 286 42 113 chr17 53546588 53546801 -41725850 + B3A SINE B2 1 198 0 8 993 440 346 8 0 chr17 53546869 53547002 -41725649 + ID_B1 SINE B4 85 218 -6 8 993 399 269 14 36 chr17 53547233 53547372 -41725279 + B1F2 SINE Alu 14 149 0 8 993 8649 130 7 5 chr17 53547453 53549581 -41723070 + Lx LINE L1 4527 6654 0 8 993 281 239 212 8 chr17 53549588 53549706 -41722945 + B1F1 SINE Alu 6 147 -2 8 993 403 244 12 0 chr17 53549714 53549796 -41722855 + ID4_ SINE ID 1 83 0 8 993 815 203 7 7 chr17 53549818 53549967 -41722684 + B1_Mur4 SINE Alu 1 149 -1 8 993 371 243 33 45 chr17 53549986 53550114 -41722537 - PB1D10 SINE Alu 0 149 29 8 993 929 221 59 0 chr17 53550176 53550380 -41722271 - B3 SINE B2 0 216 1 9 993 3669 73 80 19 chr17 53550443 53550971 -41721680 + L1_Mus3 LINE L1 6079 6638 0 9 993 1001 58 0 7 chr17 53550975 53551115 -41721536 - B2_Mm2 SINE B2 -56 139 1 9 993 497 231 77 3 chr17 53552102 53552277 -41720374 - MTD LTR MaLR -14 405 221 9 993 826 247 14 81 chr17 53552295 53552506 -41720145 - B3A SINE B2 -1 197 1 9 993 469 256 12 47 chr17 53552513 53552694 -41719957 - MTD LTR MaLR -216 203 6 9 993 460 304 15 7 chr17 53553358 53553494 -41719157 - ID_B1 SINE B4 -10 214 78 9 993 291 304 0 0 chr17 53554164 53554243 -41718408 + ID4_ SINE ID 5 83 0 9 993 368 330 86 33 chr17 53554498 53554708 -41717943 + HERVL40-int LTR ERVL 822 1042 -4488 9 993 262 224 136 6 chr17 53555018 53555118 -41717533 - PB1D7 SINE Alu -7 113 3 9 993 1697 26 0 0 chr17 53555565 53555757 -41716894 + B2_Mm1t SINE B2 2 193 0 9 993 1098 160 37 9 chr17 53555922 53556137 -41716514 - MTC LTR MaLR -5 416 196 1 993 7736 37 0 2 chr17 53556137 53557042 -41715609 - L1Md_F2 LINE L1 -3 6579 5677 1 993 1105 120 99 0 chr17 53557042 53557233 -41715418 - MTC LTR MaLR -211 210 1 1 993 1316 76 0 0 chr17 53557482 53557666 -41714985 + MTB LTR MaLR 1 184 -216 1 993 4000 63 0 0 chr17 53557666 53558349 -41714302 + L1_Mus3 LINE L1 5379 6061 -577 1 993 485 270 101 30 chr17 53558439 53558607 -41714044 - B3A SINE B2 -18 180 1 1 993 586 200 37 7 chr17 53558654 53558790 -41713861 - B1_Mur2 SINE Alu 0 149 10 1 993 27 0 0 0 chr17 53559135 53559162 -41713489 + AT_rich Low_complexity Low_complexity 1 27 0 1 993 230 219 47 0 chr17 53559329 53559393 -41713258 + GA-rich Low_complexity Low_complexity 1 67 0 1 993 222 105 0 0 chr17 53559474 53559512 -41713139 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 993 256 254 16 16 chr17 53560002 53560066 -41712585 + RSINE1 SINE B4 17 80 -85 1 993 1089 88 0 39 chr17 53560280 53560433 -41712218 + B1_Mus1 SINE Alu 2 148 0 1 993 212 175 0 0 chr17 53560433 53560473 -41712178 + A-rich Low_complexity Low_complexity 1 40 0 1 993 227 196 214 0 chr17 53560474 53560530 -41712121 + tRNA-Ala-GCA tRNA tRNA 1 68 -7 1 993 260 255 29 96 chr17 53560663 53560767 -41711884 + PB1D9 SINE Alu 12 108 -12 1 993 480 35 0 0 chr17 53560767 53560825 -41711826 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 1 993 419 196 95 32 chr17 53561489 53561584 -41711067 - PB1D7 SINE Alu -15 105 5 1 993 1266 234 57 76 chr17 53561664 53562123 -41710528 + RLTR20B3 LTR ERVK 21 470 -107 1 993 351 0 0 0 chr17 53562124 53562163 -41710488 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 993 293 47 0 23 chr17 53562252 53562296 -41710355 + (TTTG)n Simple_repeat Simple_repeat 3 45 0 1 993 555 349 31 24 chr17 53562322 53562610 -41710041 - B4A SINE B4 -1 291 2 1 993 232 320 56 68 chr17 53562620 53562635 -41710016 + B4A SINE B4 75 176 -116 1 993 503 271 50 0 chr17 53562635 53562775 -41709876 + B1F SINE Alu 3 149 0 1 993 305 247 39 0 chr17 53562854 53562931 -41709720 - ID4 SINE ID -2 81 2 1 993 1577 215 73 13 chr17 53562996 53563378 -41709273 + MTD LTR MaLR 1 405 -14 1 993 369 318 0 0 chr17 53563441 53563551 -41709100 + ID_B1 SINE B4 80 189 -35 1 993 333 0 0 0 chr17 53563711 53563748 -41708903 + (TC)n Simple_repeat Simple_repeat 2 38 0 1 993 189 0 0 0 chr17 53563779 53563800 -41708851 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 993 329 86 17 0 chr17 53563800 53563857 -41708794 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 993 374 262 12 12 chr17 53563881 53563962 -41708689 + ID4 SINE ID 3 83 0 1 993 384 306 9 18 chr17 53563984 53564094 -41708557 - PB1D7 SINE Alu -6 114 6 1 993 227 219 178 50 chr17 53564158 53564259 -41708392 + PB1D10 SINE Alu 2 115 -2 1 993 296 202 46 35 chr17 53564331 53564577 -41708074 + (TATAA)n Simple_repeat Simple_repeat 1 248 0 1 993 237 213 0 0 chr17 53564582 53564629 -41708022 + B3A SINE B2 61 107 -91 1 993 390 349 0 0 chr17 53564746 53564852 -41707799 - RSINE1 SINE B4 -19 146 41 1 993 359 217 0 14 chr17 53565125 53565195 -41707456 + ID4_ SINE ID 5 73 -10 1 993 468 0 0 0 chr17 53565790 53565842 -41706809 + (GA)n Simple_repeat Simple_repeat 1 52 0 1 993 386 295 9 26 chr17 53566061 53566176 -41706475 - ID_B1 SINE B4 -25 199 87 1 993 602 265 98 83 chr17 53566536 53566935 -41705716 - RMER10A LTR ERVL -26 416 12 1 993 180 0 0 0 chr17 53567484 53567504 -41705147 + (TC)n Simple_repeat Simple_repeat 1 20 0 1 993 494 312 66 49 chr17 53567862 53568088 -41704563 + B4A SINE B4 43 272 -20 1 993 229 233 55 0 chr17 53568107 53568180 -41704471 + (CA)n Simple_repeat Simple_repeat 2 78 0 1 993 468 113 0 0 chr17 53568419 53568490 -41704161 + B3A SINE B2 1 71 -127 1 993 988 255 94 53 chr17 53568756 53569191 -41703460 + RMER13A LTR ERVK 14 466 -394 1 993 1323 79 0 17 chr17 53569419 53569440 -41703211 - B2_Mm2 SINE B2 -17 178 159 1 993 330 26 0 0 chr17 53569440 53569479 -41703172 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1 993 1323 79 0 17 chr17 53569479 53569637 -41703014 - B2_Mm2 SINE B2 -37 158 2 1 993 1339 166 188 16 chr17 53570088 53570473 -41702178 + BGLII_B LTR ERVK 1 435 -6 1 993 7394 50 1 7 chr17 53570473 53571385 -41701266 + L1Md_F2 LINE L1 5676 6582 0 1 993 1050 254 28 120 chr17 53571385 53571531 -41701120 + BGLII_B LTR ERVK 325 445 -116 1 993 396 0 0 0 chr17 53571531 53571575 -41701076 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 993 614 280 47 131 chr17 53571575 53571608 -41701043 + BGLII_B LTR ERVK 446 483 -78 1 993 291 247 21 21 chr17 53571749 53571844 -41700807 + CT-rich Low_complexity Low_complexity 3 97 0 1 993 1241 276 38 67 chr17 53571855 53572130 -41700521 + MT2A LTR ERVL 1 272 -261 1 993 1178 37 0 0 chr17 53572130 53572266 -41700385 + B1_Mus2 SINE Alu 1 136 -11 1 993 240 35 0 0 chr17 53572266 53572295 -41700356 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 1 993 1241 276 38 67 chr17 53572295 53572496 -41700155 + MT2A LTR ERVL 273 463 -70 1 993 1770 209 63 5 chr17 53572530 53572928 -41699723 + MTC LTR MaLR 1 421 0 1 993 2405 180 28 43 chr17 53572928 53573461 -41699190 + MTC-int LTR MaLR 2 526 -732 1 993 1356 213 80 3 chr17 53573465 53573767 -41698884 - MT2A LTR ERVL -71 462 138 1 993 2941 164 103 53 chr17 53573771 53574243 -41698408 + MTC-int LTR MaLR 521 1017 -241 1 993 198 0 0 0 chr17 53574243 53574265 -41698386 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1 993 2941 164 103 53 chr17 53574265 53574389 -41698262 + MTC-int LTR MaLR 1018 1152 -106 1 993 4767 31 0 9 chr17 53574389 53574946 -41697705 - L1Md_F2 LINE L1 0 6582 6031 1 993 2941 164 103 53 chr17 53574946 53575049 -41697602 + MTC-int LTR MaLR 1153 1255 -3 1 993 399 41 0 0 chr17 53575249 53575298 -41697353 + (GA)n Simple_repeat Simple_repeat 1 49 0 1 993 226 267 0 16 chr17 53575309 53575370 -41697281 - ID4 SINE ID -19 64 5 1 993 243 0 0 0 chr17 53575614 53575641 -41697010 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 993 463 280 28 14 chr17 53575689 53575834 -41696817 + B1F SINE Alu 3 149 0 1 993 393 299 68 27 chr17 53575850 53575998 -41696653 + B3A SINE B2 44 197 -1 1 993 299 279 58 0 chr17 53576030 53576116 -41696535 + PB1D7 SINE Alu 22 112 -8 1 993 525 32 0 0 chr17 53576116 53576179 -41696472 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 1 993 436 236 19 19 chr17 53576782 53576890 -41695761 + PB1D10 SINE Alu 6 113 -4 1 993 663 285 23 11 chr17 53577001 53577175 -41695476 - RLTR18B LTR ERVK -3 509 334 1 993 8212 185 109 82 chr17 53577196 53578749 -41693902 + Lx7 LINE L1 4130 5785 -1911 1 993 3901 88 4 0 chr17 53578749 53579262 -41693389 + L1_Mus1 LINE L1 6053 6567 0 1 993 8212 212 40 47 chr17 53579262 53579326 -41693325 + Lx7 LINE L1 5786 5804 -1892 1 993 480 81 0 0 chr17 53579326 53579400 -41693251 + (TTGG)n Simple_repeat Simple_repeat 2 75 0 1 993 1215 55 0 0 chr17 53579400 53579545 -41693106 - B1_Mus2 SINE Alu -2 145 1 1 993 8212 214 44 48 chr17 53579545 53581330 -41691321 + Lx7 LINE L1 5805 7696 0 1 993 520 262 98 15 chr17 53581446 53581607 -41691044 + ID_B1 SINE B4 71 244 -48 1 993 570 219 17 0 chr17 53581793 53581912 -41690739 - B1_Mur2 SINE Alu -21 128 8 1 993 528 291 25 41 chr17 53581919 53582116 -41690535 - B3A SINE B2 -2 196 3 1 993 209 228 0 50 chr17 53582475 53582535 -41690116 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 993 277 293 148 78 chr17 53582542 53582812 -41689839 - B4 SINE B4 -2 290 2 1 993 277 237 52 13 chr17 53582915 53582992 -41689659 - PB1D7 SINE Alu -2 118 39 1 993 432 299 0 0 chr17 53583016 53583123 -41689528 + ID_B1 SINE B4 78 184 -40 1 993 212 265 0 46 chr17 53583149 53583236 -41689415 + GA-rich Low_complexity Low_complexity 1 83 0 1 993 971 62 8 0 chr17 53583686 53583815 -41688836 + B2_Mm1a SINE B2 1 130 -63 1 993 330 350 0 10 chr17 53584127 53584231 -41688420 - RSINE1 SINE B4 -19 146 44 1 993 290 324 0 29 chr17 53584237 53584342 -41688309 - B4 SINE B4 -185 107 6 1 993 255 318 23 0 chr17 53584396 53584484 -41688167 - B1F SINE Alu 0 149 60 1 993 422 321 0 0 chr17 53584479 53584585 -41688066 - PB1D7 SINE Alu -14 106 1 1 993 192 77 0 0 chr17 53584592 53584618 -41688033 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 1 993 520 206 0 10 chr17 53584618 53584721 -41687930 - PB1D9 SINE Alu -9 111 10 1 993 236 352 66 0 chr17 53584776 53584867 -41687784 - B1F1 SINE Alu -52 97 1 1 993 488 200 0 0 chr17 53585356 53585451 -41687200 + ID_B1 SINE B4 126 220 -4 1 993 217 189 42 10 chr17 53585456 53585552 -41687099 + GA-rich Low_complexity Low_complexity 2 100 0 1 993 231 316 0 0 chr17 53585941 53585998 -41686653 - tRNA-Ala-GCY_ tRNA tRNA -10 65 9 1 993 219 36 0 0 chr17 53586020 53586048 -41686603 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 993 232 234 0 0 chr17 53586078 53586125 -41686526 - PB1D10 SINE Alu -50 67 21 1 993 295 276 84 128 chr17 53586223 53586402 -41686249 + MTE2b LTR MaLR 170 340 -39 1 993 504 248 26 0 chr17 53586473 53586586 -41686065 - PB1D10 SINE Alu -1 116 1 1 993 189 268 0 0 chr17 53586834 53586890 -41685761 + GA-rich Low_complexity Low_complexity 1 56 0 1 993 214 220 60 0 chr17 53586985 53587035 -41685616 + B1F SINE Alu 97 149 0 1 993 270 294 0 0 chr17 53587048 53587116 -41685535 + ID4_ SINE ID 5 72 -11 1 993 2986 59 15 13 chr17 53587236 53587631 -41685020 + MTA_Mm LTR MaLR 1 396 0 1 993 264 236 154 22 chr17 53587666 53587757 -41684894 + PB1D7 SINE Alu 12 114 -6 1 993 594 224 0 75 chr17 53587904 53588052 -41684599 + B1_Mur1 SINE Alu 2 138 -11 1 993 207 0 0 0 chr17 53588052 53588075 -41684576 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 993 235 310 0 0 chr17 53588270 53588328 -41684323 + polypurine Low_complexity Low_complexity 4 61 0 1 993 368 239 0 0 chr17 53589235 53589306 -41683345 + ID4 SINE ID 2 72 -11 1 993 282 56 0 0 chr17 53589331 53589367 -41683284 + (CATA)n Simple_repeat Simple_repeat 3 38 0 2 993 270 232 172 0 chr17 53589523 53589619 -41683032 + B1_Mus1 SINE Alu 11 120 0 2 993 713 177 15 23 chr17 53589639 53589772 -41682879 + B1_Mm SINE Alu 3 134 -13 2 993 216 0 0 0 chr17 53589772 53589796 -41682855 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2 993 328 343 49 14 chr17 53589887 53590029 -41682622 + RSINE1 SINE B4 14 160 -5 2 993 731 219 0 61 chr17 53590101 53590266 -41682385 + RSINE1 SINE B4 10 164 -1 2 993 237 245 0 60 chr17 53590380 53590480 -41682171 + (TAAA)n Simple_repeat Simple_repeat 3 96 0 2 993 1084 195 14 5 chr17 53591176 53591387 -41681264 + B3 SINE B2 1 213 -3 2 993 542 299 28 11 chr17 53591420 53591599 -41681052 + B3 SINE B2 1 182 -34 2 993 1159 55 7 0 chr17 53592120 53592266 -41680385 + B1_Mus2 SINE Alu 1 147 0 2 993 198 103 0 0 chr17 53592266 53592295 -41680356 + (A)n Simple_repeat Simple_repeat 1 29 0 2 993 1519 60 0 18 chr17 53592349 53592569 -41680082 - BGLII LTR ERVK -2 419 204 2 993 299 87 0 0 chr17 53592567 53592613 -41680038 - BGLII LTR ERVK -375 46 1 2 993 3334 217 35 36 chr17 53592619 53593562 -41679089 - RMER3D-int LTR ERVK -10 2832 1891 2 993 2087 157 101 16 chr17 53593654 53594154 -41678497 - RMER3D-int LTR ERVK -1309 1533 1014 2 993 471 60 100 33 chr17 53594176 53594296 -41678355 + CT-rich Low_complexity Low_complexity 3 130 0 2 993 623 98 42 17 chr17 53594296 53594414 -41678237 - RMER3D-int LTR ERVK -2250 592 489 2 993 671 252 34 77 chr17 53594449 53594746 -41677905 - RMER3D-int LTR ERVK -1907 935 652 2 993 498 201 0 56 chr17 53594776 53594918 -41677733 - RMER3D-int LTR ERVK -2057 785 652 2 993 2889 68 54 15 chr17 53595296 53595701 -41676950 - BGLII LTR ERVK 0 421 1 2 993 418 206 19 12 chr17 53595730 53595837 -41676814 - ID_B1 SINE B4 -39 185 82 2 993 217 277 0 58 chr17 53595855 53595924 -41676727 - ID_B1 SINE B4 -60 164 100 2 993 303 257 57 0 chr17 53595867 53595937 -41676714 - B1F SINE Alu -74 75 2 2 993 409 302 8 8 chr17 53596364 53596484 -41676167 + PB1D7 SINE Alu 1 120 0 2 993 893 242 21 91 chr17 53596490 53596630 -41676021 + ID_B1 SINE B4 1 140 -84 2 993 288 0 0 0 chr17 53596630 53596662 -41675989 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 993 893 242 21 91 chr17 53596662 53596676 -41675975 + ID_B1 SINE B4 141 141 -83 2 993 1127 61 0 7 chr17 53596676 53596824 -41675827 - B1_Mus1 SINE Alu 0 148 2 2 993 893 242 21 91 chr17 53596824 53596909 -41675742 + ID_B1 SINE B4 141 224 0 2 993 914 268 30 118 chr17 53597166 53597576 -41675075 - MTC LTR MaLR -15 406 36 2 993 1067 138 152 15 chr17 53597576 53597774 -41674877 + URR1A DNA MER1_type 1 225 -1 2 993 333 317 28 137 chr17 53597774 53597804 -41674847 - MTC LTR MaLR -365 42 16 2 993 230 116 23 0 chr17 53597892 53597935 -41674716 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 993 272 284 73 10 chr17 53597991 53598087 -41674564 - PB1 SINE Alu -25 102 1 2 993 278 327 115 0 chr17 53598098 53598254 -41674397 + MER34A LTR ERV1 368 541 -30 2 993 471 212 30 0 chr17 53598523 53598619 -41674032 - PB1D7 SINE Alu 0 120 22 2 993 1500 58 0 0 chr17 53598619 53598827 -41673824 + MTB LTR MaLR 1 208 -192 2 993 313 302 18 62 chr17 53598859 53598972 -41673679 + PB1D7 SINE Alu 8 115 -5 2 993 881 145 402 111 chr17 53599085 53599343 -41673308 - MTC LTR MaLR 0 421 100 2 993 1813 58 0 0 chr17 53599343 53599567 -41673084 - L1_Mus1 LINE L1 0 6567 6344 2 993 577 134 60 220 chr17 53599567 53599671 -41672980 - MTC LTR MaLR -322 99 1 2 993 851 164 14 7 chr17 53599694 53599841 -41672810 + RLTR19 LTR ERVK 352 499 0 2 993 1647 118 157 18 chr17 53599999 53600285 -41672366 + ORR1A3 LTR MaLR 1 326 0 2 993 313 294 108 0 chr17 53600392 53600494 -41672157 - PB1D7 SINE Alu -7 113 1 2 993 480 130 246 25 chr17 53601029 53601147 -41671504 + B1_Mus1 SINE Alu 5 148 0 2 993 2453 158 37 7 chr17 53601202 53601609 -41671042 + MTC LTR MaLR 3 421 0 2 993 333 0 0 0 chr17 53602858 53602895 -41669756 + (TC)n Simple_repeat Simple_repeat 1 37 0 2 993 312 238 0 0 chr17 53603138 53603201 -41669450 + PB1D7 SINE Alu 24 86 -34 2 993 514 208 16 23 chr17 53603375 53603503 -41669148 + B1F2 SINE Alu 15 141 -8 2 993 331 248 163 16 chr17 53603730 53603853 -41668798 + RSINE1 SINE B4 3 143 -22 2 993 242 174 13 92 chr17 53603897 53603943 -41668708 + Lx2 LINE L1 6924 6970 -27 2 993 3304 53 0 2 chr17 53603943 53604340 -41668311 - MTA_Mm LTR MaLR 0 396 1 2 993 242 174 13 92 chr17 53604340 53604369 -41668282 + Lx2 LINE L1 6971 6993 -4 2 993 563 161 0 8 chr17 53604378 53604503 -41668148 + L1_Mur3 LINE L1 3249 3372 -2508 2 993 2657 149 71 43 chr17 53604523 53605014 -41667637 - RMER1B Other Other -9 1057 553 2 993 244 319 0 0 chr17 53605034 53605106 -41667545 - RMER1A Other Other -831 199 128 2 993 252 250 47 0 chr17 53605102 53605166 -41667485 + RMER1A Other Other 297 363 -667 2 993 809 206 79 152 chr17 53605164 53605507 -41667144 + Lx6 LINE L1 7138 7455 -5 2 993 761 125 0 16 chr17 53605520 53605642 -41667009 - B1_Mur4 SINE Alu -1 149 30 2 993 207 0 0 0 chr17 53605675 53605698 -41666953 + (GA)n Simple_repeat Simple_repeat 1 23 0 2 993 1223 48 0 0 chr17 53606114 53606260 -41666391 + B1_Mus2 SINE Alu 2 147 0 2 993 222 118 0 0 chr17 53606260 53606294 -41666357 + (A)n Simple_repeat Simple_repeat 1 34 0 2 993 180 0 0 0 chr17 53606749 53606769 -41665882 + (G)n Simple_repeat Simple_repeat 1 20 0 2 993 181 57 28 28 chr17 53606795 53606831 -41665820 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 2 993 181 75 0 48 chr17 53606888 53606930 -41665721 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 2 993 1058 88 0 0 chr17 53606945 53607082 -41665569 - B1_Mm SINE Alu -10 137 1 2 993 672 193 14 21 chr17 53607084 53607227 -41665424 - B1_Mus1 SINE Alu 0 148 7 2 993 419 318 23 0 chr17 53607233 53607362 -41665289 - ID_B1 SINE B4 -10 214 83 2 993 344 267 192 36 chr17 53607639 53607885 -41664766 - B4 SINE B4 0 292 9 2 993 382 198 11 20 chr17 53607953 53608051 -41664600 - MTE2b LTR MaLR 0 379 281 2 994 3622 83 139 11 chr17 53609727 53610260 -41662391 - MT2B LTR ERVL 0 601 1 2 994 508 234 106 30 chr17 53610260 53610392 -41662259 + RSINE1 SINE B4 21 162 -3 2 994 1296 107 11 0 chr17 53610678 53610855 -41661796 + B2_Mm1t SINE B2 1 179 -14 2 994 357 94 256 50 chr17 53610901 53611021 -41661630 + B2_Mm2 SINE B2 46 195 0 2 994 619 346 25 4 chr17 53611371 53611649 -41661002 + Lx8 LINE L1 7040 7323 -150 2 994 342 232 86 0 chr17 53611650 53611739 -41660912 + B3A SINE B2 1 106 -110 2 994 318 199 70 175 chr17 53611744 53611915 -41660736 - RMER10A LTR ERVL -19 423 271 2 994 326 278 61 98 chr17 53611940 53612235 -41660416 - RMER17C LTR ERVK -50 360 77 2 994 288 295 88 111 chr17 53612180 53612307 -41660344 - RMER10A LTR ERVL -141 301 173 2 994 1059 103 0 7 chr17 53612307 53612444 -41660207 + B1_Mur3 SINE Alu 1 136 -13 2 994 288 295 88 111 chr17 53612444 53612613 -41660038 - RMER10A LTR ERVL -270 172 13 2 994 313 234 475 47 chr17 53612646 53612840 -41659811 - RLTR19-int LTR ERVK -1818 4319 4043 2 994 342 226 116 101 chr17 53613026 53613164 -41659487 - RMER17C-int LTR ERVK -489 2749 2610 2 994 347 264 128 128 chr17 53613176 53613441 -41659210 + RMER10A LTR ERVL 164 428 -14 2 994 1443 141 26 48 chr17 53613483 53613752 -41658899 + RMER10B LTR ERVL 2 264 -134 2 994 225 0 0 0 chr17 53613754 53613779 -41658872 + (TTTC)n Simple_repeat Simple_repeat 4 28 0 2 994 195 42 0 0 chr17 53613786 53613810 -41658841 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 994 1186 58 0 0 chr17 53613810 53613949 -41658702 - B1_Mus1 SINE Alu -8 140 2 2 994 1502 76 5 0 chr17 53614014 53614199 -41658452 + B2_Mm1a SINE B2 2 187 -6 2 994 518 288 121 48 chr17 53615646 53616018 -41656633 - RMER10A LTR ERVL -25 417 19 2 994 3970 138 141 11 chr17 53616064 53616732 -41655919 + RMER6A LTR ERVK 1 755 -1 2 994 234 208 250 0 chr17 53616744 53616816 -41655835 + B3 SINE B2 122 211 -5 2 994 410 261 164 81 chr17 53616984 53617189 -41655462 - RMER10A LTR ERVL -25 417 211 2 994 555 56 0 0 chr17 53617189 53617260 -41655391 + (GA)n Simple_repeat Simple_repeat 1 71 0 2 994 410 261 164 81 chr17 53617260 53617413 -41655238 - RMER10A LTR ERVL -232 210 30 2 994 342 0 0 0 chr17 53617723 53617761 -41654890 + (GA)n Simple_repeat Simple_repeat 1 38 0 2 994 211 211 0 19 chr17 53618645 53618698 -41653953 + GA-rich Low_complexity Low_complexity 2 53 0 2 994 375 226 86 31 chr17 53619940 53620068 -41652583 + ID_B1 SINE B4 83 217 -7 2 994 437 309 14 29 chr17 53620557 53620697 -41651954 - B1_Mur1 SINE Alu -8 141 4 2 994 264 242 268 21 chr17 53620697 53620794 -41651857 - PB1 SINE Alu -4 123 3 2 994 529 227 0 48 chr17 53620939 53621064 -41651587 + PB1D9 SINE Alu 1 119 -1 2 994 243 297 111 98 chr17 53621285 53621438 -41651213 - RSINE1 SINE B4 0 165 11 2 994 360 239 21 64 chr17 53621445 53621539 -41651112 - PB1D10 SINE Alu -7 110 21 2 994 287 224 0 17 chr17 53621688 53621747 -41650904 - B1_Mur1 SINE Alu -14 135 78 2 994 204 209 0 0 chr17 53622122 53622165 -41650486 + CT-rich Low_complexity Low_complexity 1 43 0 2 994 448 311 100 0 chr17 53622176 53622356 -41650295 - B3A SINE B2 0 198 1 2 994 265 293 80 10 chr17 53622356 53622456 -41650195 + MIR SINE MIR 34 140 -122 2 994 214 250 182 30 chr17 53622614 53622713 -41649938 - PB1D10 SINE Alu -3 114 1 2 994 350 287 151 32 chr17 53623709 53623835 -41648816 - PB1D7 SINE Alu -2 147 7 2 994 649 264 97 10 chr17 53623933 53624128 -41648523 - ID_B1 SINE B4 -11 213 2 2 994 1221 61 7 0 chr17 53624155 53624302 -41648349 - B1_Mus1 SINE Alu 0 148 1 2 994 891 176 86 20 chr17 53624598 53624795 -41647856 + URR1A DNA MER1_type 1 210 -16 3 994 336 222 158 20 chr17 53624791 53624892 -41647759 - RSINE1 SINE B4 -48 117 3 3 994 24 53 0 0 chr17 53625600 53625638 -41647013 + AT_rich Low_complexity Low_complexity 1 38 0 3 994 288 148 18 36 chr17 53625653 53625709 -41646942 - B2_Mm2 SINE B2 -94 101 47 3 994 931 90 264 0 chr17 53625782 53625926 -41646725 - B2_Mm2 SINE B2 -13 182 1 3 994 285 260 91 0 chr17 53625938 53626015 -41646636 - PB1D7 SINE Alu 0 120 37 3 994 500 256 75 30 chr17 53626070 53626203 -41646448 - ID_B1 SINE B4 -6 218 80 3 994 275 205 122 49 chr17 53626422 53626504 -41646147 - PB1D7 SINE Alu 0 120 33 3 994 395 259 0 36 chr17 53626941 53627025 -41645626 - ID4_ SINE ID 0 83 3 3 994 648 174 73 29 chr17 53627044 53627180 -41645471 + B1_Mus1 SINE Alu 7 148 0 3 994 294 274 14 14 chr17 53627186 53627260 -41645391 + tRNA-Ala-GCY_ tRNA tRNA 1 74 -1 3 994 2383 62 55 3 chr17 53627341 53627650 -41645001 - L1_Mus1 LINE L1 0 6567 6243 3 994 331 303 87 39 chr17 53627909 53627925 -41644726 + B1F1 SINE Alu 1 108 -41 3 994 381 276 69 0 chr17 53627925 53628012 -41644639 + ID_B1 SINE B4 94 186 -38 3 994 510 280 164 0 chr17 53628059 53628248 -41644403 - ID_B1 SINE B4 -3 221 2 3 994 374 324 68 7 chr17 53628310 53628456 -41644195 - RSINE1 SINE B4 -8 157 3 3 994 295 226 48 106 chr17 53628672 53628776 -41643875 - PB1 SINE Alu -3 124 27 3 994 800 192 19 97 chr17 53628846 53628897 -41643754 - B2_Mm2 SINE B2 -4 191 152 3 994 366 23 0 0 chr17 53628897 53628940 -41643711 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 3 994 800 192 19 97 chr17 53628940 53629095 -41643556 - B2_Mm2 SINE B2 -44 151 1 3 994 273 302 105 0 chr17 53629143 53629229 -41643422 - PB1D10 SINE Alu -5 112 18 3 994 1421 91 27 0 chr17 53629982 53630168 -41642483 - B2_Mm2 SINE B2 -4 191 1 3 994 304 312 61 18 chr17 53630327 53630441 -41642210 - MLT1G3 LTR MaLR -310 285 167 3 994 1678 32 27 0 chr17 53630531 53630719 -41641932 - B2_Mm1t SINE B2 0 193 1 3 994 336 130 0 0 chr17 53630889 53630958 -41641693 + (CTCA)n Simple_repeat Simple_repeat 2 70 0 3 994 269 81 0 0 chr17 53630960 53630997 -41641654 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 3 994 291 274 13 40 chr17 53630997 53631073 -41641578 - ID4 SINE ID -9 74 1 3 994 297 271 14 28 chr17 53631353 53631425 -41641226 - B1F1 SINE Alu -70 79 9 3 994 416 303 0 51 chr17 53631460 53631593 -41641058 + B1_Mur1 SINE Alu 13 138 -11 3 994 1297 75 69 0 chr17 53631614 53631787 -41640864 + B2_Mm2 SINE B2 2 186 -9 3 994 598 280 56 51 chr17 53631798 53631994 -41640657 - B3 SINE B2 -19 197 1 3 994 180 0 0 0 chr17 53632194 53632214 -41640437 + (T)n Simple_repeat Simple_repeat 1 20 0 3 994 211 312 0 31 chr17 53632435 53632531 -41640120 + T-rich Low_complexity Low_complexity 5 97 0 3 994 315 308 16 40 chr17 53632638 53632724 -41639927 - ID_B1 SINE B4 -62 162 80 3 994 186 43 0 0 chr17 53632724 53632747 -41639904 + (TGG)n Simple_repeat Simple_repeat 1 23 0 3 994 315 308 16 40 chr17 53632747 53632785 -41639866 - ID SINE ID -145 79 42 3 994 655 249 51 34 chr17 53632785 53632922 -41639729 - B3 SINE B2 -38 178 1 3 994 262 253 85 37 chr17 53632957 53633039 -41639612 - PB1D10 SINE Alu -13 104 19 3 994 730 229 0 37 chr17 53633351 53633487 -41639164 - B1_Mur1 SINE Alu -6 143 13 3 994 752 280 7 0 chr17 53633612 53633762 -41638889 - B3 SINE B2 -65 151 1 3 994 468 265 0 38 chr17 53633842 53633948 -41638703 - PB1D10 SINE Alu -15 102 1 3 994 274 243 55 41 chr17 53634126 53634199 -41638452 + ID4_ SINE ID 9 82 -1 3 994 228 184 0 26 chr17 53634401 53634440 -41638211 + B1F SINE Alu 13 50 -99 3 994 229 26 26 26 chr17 53635395 53635434 -41637217 + (GTTTG)n Simple_repeat Simple_repeat 2 40 0 3 994 1228 61 0 0 chr17 53635434 53635572 -41637079 - B1_Mus1 SINE Alu -8 140 3 3 994 328 282 53 120 chr17 53635592 53635725 -41636926 - ID_B1 SINE B4 0 224 101 3 994 458 259 113 9 chr17 53635616 53635741 -41636910 - B1F SINE Alu -10 139 1 3 994 586 291 0 14 chr17 53635740 53635883 -41636768 - B1F SINE Alu 0 149 9 3 994 268 323 7 70 chr17 53636243 53636386 -41636265 - RMER4B LTR ERVK -442 143 10 3 994 316 289 48 0 chr17 53636465 53636548 -41636103 - PB1D7 SINE Alu -27 93 7 3 994 306 330 96 0 chr17 53636604 53636719 -41635932 + RSINE1 SINE B4 21 146 -19 3 994 302 280 0 39 chr17 53636710 53636788 -41635863 + ID_B1 SINE B4 126 200 -24 3 994 919 162 34 188 chr17 53637211 53637336 -41635315 + URR1A DNA MER1_type 2 88 -138 3 994 1210 88 0 0 chr17 53637336 53637483 -41635168 - B1_Mus2 SINE Alu 0 147 1 3 994 919 162 34 188 chr17 53637483 53637623 -41635028 + URR1A DNA MER1_type 89 226 0 3 994 291 275 148 103 chr17 53637950 53638153 -41634498 + ID_B1 SINE B4 1 212 -12 3 994 797 110 17 17 chr17 53638354 53638474 -41634177 + PB1D9 SINE Alu 1 120 0 3 994 357 244 73 62 chr17 53638546 53638642 -41634009 + RSINE1 SINE B4 56 152 -13 3 994 208 77 0 49 chr17 53638647 53638688 -41633963 + (CATA)n Simple_repeat Simple_repeat 4 42 0 3 994 439 275 19 29 chr17 53638733 53638838 -41633813 + B1F2 SINE Alu 1 104 -45 3 994 216 221 35 11 chr17 53640076 53640163 -41632488 + CT-rich Low_complexity Low_complexity 3 91 0 3 994 320 311 36 36 chr17 53640385 53640495 -41632156 - Tigger7 DNA MER2_type -1 2490 2381 3 994 294 270 80 0 chr17 53640463 53640563 -41632088 - Tigger7 DNA MER2_type -1884 607 500 3 994 225 0 0 0 chr17 53640765 53640790 -41631861 + (T)n Simple_repeat Simple_repeat 1 25 0 3 994 1210 70 0 0 chr17 53640790 53640933 -41631718 - B1_Mus2 SINE Alu 0 147 5 3 994 723 73 0 0 chr17 53640990 53641086 -41631565 - BC1_Mm scRNA scRNA -55 97 2 3 994 2149 69 20 3 chr17 53641092 53641384 -41631267 - ORR1A2 LTR MaLR -15 312 16 3 994 2713 156 25 19 chr17 53641388 53641887 -41630764 - ORR1A2-int LTR MaLR 0 1963 1266 3 994 288 0 0 0 chr17 53642082 53642114 -41630537 + (TTG)n Simple_repeat Simple_repeat 2 33 0 3 994 555 176 10 0 chr17 53642115 53642217 -41630434 - PB1D10 SINE Alu -5 112 10 3 994 297 221 37 49 chr17 53642147 53642228 -41630423 - B4A SINE B4 -125 167 88 3 994 226 309 15 0 chr17 53642260 53642328 -41630323 + ID4_ SINE ID 3 71 -12 3 994 955 118 7 0 chr17 53642383 53642518 -41630133 + B2_Mm1t SINE B2 1 136 -57 3 994 21 36 0 0 chr17 53642518 53642546 -41630105 + AT_rich Low_complexity Low_complexity 1 28 0 3 994 628 226 14 86 chr17 53642652 53642714 -41629937 + B1_Mur4 SINE Alu 1 62 -88 3 994 1673 47 0 5 chr17 53642714 53642908 -41629743 + B2_Mm1a SINE B2 1 193 0 3 994 628 226 14 86 chr17 53642908 53642985 -41629666 + B1_Mur4 SINE Alu 63 130 -20 3 994 3759 213 64 50 chr17 53643223 53644108 -41628543 - RMER13B LTR ERVK -6 902 5 3 994 275 336 0 81 chr17 53644841 53644977 -41627674 - PB1 SINE Alu -1 126 2 3 994 1174 104 63 37 chr17 53645022 53645211 -41627440 + B2_Mm2 SINE B2 1 194 -1 3 994 22 35 0 0 chr17 53648157 53648186 -41624465 + AT_rich Low_complexity Low_complexity 1 29 0 3 994 621 305 78 17 chr17 53648258 53648438 -41624213 - B3A SINE B2 -7 191 1 3 994 375 318 121 6 chr17 53648472 53648646 -41624005 + B3A SINE B2 1 194 -4 3 994 521 286 99 7 chr17 53648670 53648811 -41623840 + RSINE1 SINE B4 2 155 -10 3 994 195 129 0 0 chr17 53648852 53648883 -41623768 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 994 537 248 130 7 chr17 53649365 53649511 -41623140 + RSINE1 SINE B4 2 165 0 3 994 295 123 179 30 chr17 53649550 53649617 -41623034 + PB1D9 SINE Alu 31 107 -13 3 994 321 200 52 26 chr17 53649725 53649802 -41622849 - PB1D9 SINE Alu 0 120 42 3 994 261 83 0 0 chr17 53650109 53650145 -41622506 + (TTCGG)n Simple_repeat Simple_repeat 2 37 0 3 994 318 305 12 0 chr17 53650151 53650233 -41622418 - ID_B1 SINE B4 -8 216 134 3 994 549 204 205 53 chr17 53650793 53650833 -41621818 + B3A SINE B2 2 40 -158 3 994 1679 52 0 0 chr17 53650833 53651024 -41621627 + B2_Mm1t SINE B2 1 191 -2 3 994 549 204 205 53 chr17 53651024 53651154 -41621497 + B3A SINE B2 41 198 0 3 994 234 321 0 23 chr17 53651201 53651287 -41621364 + GA-rich Low_complexity Low_complexity 2 85 0 3 994 454 224 73 18 chr17 53651290 53651399 -41621252 + PB1D7 SINE Alu 6 120 0 3 994 236 200 59 20 chr17 53651443 53651494 -41621157 + B1F SINE Alu 37 89 -60 3 994 230 211 115 0 chr17 53651525 53651577 -41621074 + RSINE1 SINE B4 83 140 -25 3 994 649 217 39 8 chr17 53651990 53652120 -41620531 + B1_Mur1 SINE Alu 11 144 -5 3 994 1020 155 363 33 chr17 53652396 53652702 -41619949 + MTB_Mm LTR MaLR 1 407 0 3 994 481 252 22 51 chr17 53653336 53653474 -41619177 + ID_B1 SINE B4 84 217 -7 3 994 2100 166 43 5 chr17 53653698 53654074 -41618577 + RMER15 LTR ERVL 184 573 -2 3 994 484 193 300 0 chr17 53655350 53655500 -41617151 + B3 SINE B2 14 208 -8 3 994 290 336 20 73 chr17 53655754 53655905 -41616746 - B4A SINE B4 -1 291 149 3 994 348 297 28 56 chr17 53656353 53656460 -41616191 + PB1D10 SINE Alu 1 104 -13 3 994 5104 164 131 39 chr17 53656708 53657431 -41615220 + RMER12 LTR ERVK 1 772 -550 3 994 384 22 0 0 chr17 53657431 53657476 -41615175 + (CATA)n Simple_repeat Simple_repeat 3 47 0 3 994 5104 164 131 39 chr17 53657476 53657574 -41615077 + RMER12 LTR ERVK 773 935 -387 3 994 201 39 0 0 chr17 53657574 53657600 -41615051 + (TGAG)n Simple_repeat Simple_repeat 1 26 0 3 994 5104 164 131 39 chr17 53657600 53657893 -41614758 + RMER12 LTR ERVK 936 1217 -105 3 994 307 220 78 20 chr17 53658109 53658211 -41614440 + L1_Mur3 LINE L1 839 946 -6782 4 994 342 0 0 0 chr17 53658225 53658263 -41614388 + (A)n Simple_repeat Simple_repeat 1 38 0 4 994 5883 167 46 40 chr17 53658280 53658775 -41613876 + L1_Mur3 LINE L1 4200 4668 -1212 4 994 1003 110 120 55 chr17 53658775 53658958 -41613693 + B2_Mm2 SINE B2 1 195 0 4 994 5883 167 46 40 chr17 53658958 53659665 -41612986 + L1_Mur3 LINE L1 4669 5409 -471 4 994 1001 324 102 12 chr17 53659663 53660163 -41612488 + Lx5 LINE L1 5908 6452 -598 4 994 1828 249 84 17 chr17 53660174 53660652 -41611999 + Lx6 LINE L1 6935 7444 -16 4 994 405 0 0 0 chr17 53660655 53660700 -41611951 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 4 994 887 148 0 0 chr17 53660703 53660838 -41611813 + B1_Mus1 SINE Alu 14 148 0 4 994 917 151 433 84 chr17 53660875 53661117 -41611534 + ORR1A4 LTR MaLR 1 326 0 4 994 781 238 33 66 chr17 53661164 53661733 -41610918 - L1_Mur3 LINE L1 -4343 1537 984 4 994 4276 169 66 19 chr17 53661728 53661991 -41610660 - L1_Mur3 LINE L1 -1774 4106 3810 4 994 207 0 0 0 chr17 53661991 53662014 -41610637 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 4 994 4276 169 66 19 chr17 53662014 53662652 -41609999 - L1_Mur3 LINE L1 -2071 3809 3165 4 994 260 27 27 0 chr17 53662652 53662689 -41609962 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 4 994 4276 169 66 19 chr17 53662689 53662722 -41609929 - L1_Mur3 LINE L1 -2716 3164 3128 4 994 2560 148 200 9 chr17 53662768 53663116 -41609535 - RMER6C LTR ERVK 0 690 237 4 994 2160 112 6 22 chr17 53663116 53663435 -41609216 - L1Md_F2 LINE L1 0 6582 6269 4 994 2560 148 200 9 chr17 53663435 53663665 -41608986 - RMER6C LTR ERVK -454 236 2 4 994 829 176 0 76 chr17 53663681 53663866 -41608785 - L1_Mur3 LINE L1 -2818 3062 2892 4 994 1415 173 39 19 chr17 53663866 53664125 -41608526 + Lx4B LINE L1 6784 7047 -11 4 994 2410 181 66 22 chr17 53664201 53664515 -41608136 + RMER6-int LTR ERVK 389 779 -2398 4 994 1179 109 0 0 chr17 53664515 53664662 -41607989 + B1_Mus2 SINE Alu 1 147 0 4 994 2410 125 8 11 chr17 53664662 53664864 -41607787 + RMER6-int LTR ERVK 780 982 -2195 4 994 942 255 106 31 chr17 53664864 53665229 -41607422 + RLTR19 LTR ERVK 1 499 0 4 994 463 139 42 0 chr17 53665229 53665301 -41607350 + RMER6-int LTR ERVK 979 1053 -2124 4 994 4631 98 1 49 chr17 53665301 53665505 -41607146 + L1_Mus3 LINE L1 5217 5413 -470 4 994 1402 59 0 0 chr17 53665505 53665675 -41606976 + L1_Mus1 LINE L1 6398 6567 0 4 994 7745 88 13 10 chr17 53665675 53666910 -41605741 + L1_Mus3 LINE L1 5414 6638 0 4 994 5661 143 48 11 chr17 53667013 53667966 -41604685 + RMER6-int LTR ERVK 1045 2033 -1144 4 994 1083 256 36 92 chr17 53667966 53668414 -41604237 - RLTR23 LTR ERV1 0 430 8 4 994 2112 136 66 44 chr17 53668556 53668963 -41603688 - RLTR19-int LTR ERVK -1758 4379 3964 4 994 1237 28 14 0 chr17 53668966 53669111 -41603540 + B1_Mm SINE Alu 1 147 0 4 994 989 92 181 12 chr17 53669148 53669314 -41603337 + B2_Mm2 SINE B2 1 194 -1 4 994 1330 90 26 11 chr17 53669314 53669504 -41603147 + B2_Mm2 SINE B2 2 194 -1 4 994 633 56 5 5 chr17 53669508 53669606 -41603045 + B1_Mm SINE Alu 23 147 0 4 994 1147 182 76 0 chr17 53669626 53669851 -41602800 - RLTR19-int LTR ERVK -2160 3977 3736 4 994 1013 39 0 0 chr17 53669852 53669982 -41602669 + B1_Mus1 SINE Alu 19 148 0 4 994 1616 144 11 89 chr17 53669996 53670346 -41602305 - RLTR19-int LTR ERVK -2397 3740 3418 4 994 303 28 0 0 chr17 53670592 53670628 -41602023 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 4 994 1075 62 43 12 chr17 53670632 53670795 -41601856 - B2_Mm2 SINE B2 -26 169 2 4 994 2683 185 90 90 chr17 53670801 53671389 -41601262 - RLTR19-int LTR ERVK -2985 3152 2569 4 994 1210 49 0 0 chr17 53671389 53671533 -41601118 + B1_Mus2 SINE Alu 1 144 -3 4 994 351 0 0 0 chr17 53671533 53671572 -41601079 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 4 994 2683 196 292 68 chr17 53671572 53671977 -41600674 - RLTR19-int LTR ERVK -3569 2568 2068 4 994 837 0 0 0 chr17 53672025 53672118 -41600533 + (GTTTG)n Simple_repeat Simple_repeat 2 94 0 4 994 1132 66 0 0 chr17 53672118 53672255 -41600396 - B1_Mus1 SINE Alu -9 139 3 4 994 2607 187 74 135 chr17 53672261 53672472 -41600179 + L1_Mur3 LINE L1 3584 3802 -2078 4 994 1435 65 38 0 chr17 53672472 53672657 -41599994 + B2_Mm1t SINE B2 2 193 0 4 994 2607 187 74 135 chr17 53672657 53672744 -41599907 + L1_Mur3 LINE L1 3803 3900 -1980 4 994 1141 81 0 13 chr17 53672744 53672894 -41599757 + B1_Mus1 SINE Alu 1 148 0 4 994 2607 187 74 135 chr17 53672894 53673014 -41599637 + L1_Mur3 LINE L1 3901 3932 -1948 4 994 360 0 0 0 chr17 53673014 53673054 -41599597 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 4 994 2607 187 74 135 chr17 53673054 53673566 -41599085 + L1_Mur3 LINE L1 3933 4459 -1421 4 994 638 145 249 6 chr17 53673570 53673737 -41598914 + L1_Mur3 LINE L1 5074 5283 -597 4 994 1151 75 0 0 chr17 53673737 53673884 -41598767 + B1_Mm SINE Alu 1 147 0 4 994 3422 240 65 2 chr17 53673894 53674709 -41597942 + Lx7 LINE L1 6432 7297 -399 4 994 396 232 122 7 chr17 53674768 53674907 -41597744 + Lx7 LINE L1 7535 7689 -7 4 994 1426 77 16 0 chr17 53674990 53675173 -41597478 - B2_Mm2 SINE B2 -8 187 2 4 994 347 134 30 0 chr17 53675213 53675280 -41597371 + (TATATG)n Simple_repeat Simple_repeat 3 71 0 4 994 358 295 30 77 chr17 53675319 53675488 -41597163 - RSINE1 SINE B4 -2 163 3 4 994 237 265 0 108 chr17 53675509 53675602 -41597049 - ID_B1 SINE B4 0 224 142 4 994 1078 232 63 82 chr17 53675602 53676073 -41596578 + RLTR20D LTR ERVK 1 462 -106 4 994 459 0 0 0 chr17 53676073 53676124 -41596527 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 994 351 0 0 0 chr17 53676192 53676231 -41596420 + (CATTT)n Simple_repeat Simple_repeat 3 41 0 4 994 518 0 16 0 chr17 53676233 53676295 -41596356 + (TC)n Simple_repeat Simple_repeat 1 63 0 4 994 305 289 0 50 chr17 53676399 53676479 -41596172 + B3A SINE B2 4 79 -119 4 994 475 195 33 74 chr17 53676578 53676700 -41595951 + PB1D9 SINE Alu 2 118 -2 4 994 239 236 0 27 chr17 53676702 53676757 -41595894 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 4 994 745 233 7 0 chr17 53676757 53676903 -41595748 + B1_Mur1 SINE Alu 1 147 -2 4 994 239 236 0 27 chr17 53676903 53676921 -41595730 + (CAAA)n Simple_repeat Simple_repeat 3 20 0 4 994 189 0 0 0 chr17 53676921 53676942 -41595709 + (TAAAAA)n Simple_repeat Simple_repeat 3 23 0 4 994 497 241 168 73 chr17 53676945 53677124 -41595527 + B3 SINE B2 2 197 -1 4 994 1294 101 10 26 chr17 53677124 53677317 -41595334 + B2_Mm1t SINE B2 2 191 -2 4 994 212 324 152 62 chr17 53677355 53677500 -41595151 + RSINE1 SINE B4 8 165 0 4 994 749 184 28 0 chr17 53677526 53677667 -41594984 + B1_Mur2 SINE Alu 5 149 0 4 994 670 302 0 34 chr17 53677688 53677863 -41594788 + B3A SINE B2 1 169 -29 4 994 396 0 0 0 chr17 53677894 53677938 -41594713 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 994 22 0 0 0 chr17 53677962 53677984 -41594667 + AT_rich Low_complexity Low_complexity 1 22 0 4 994 303 49 0 0 chr17 53678264 53678305 -41594346 + (CAAT)n Simple_repeat Simple_repeat 1 41 0 4 994 1181 62 0 0 chr17 53678318 53678464 -41594187 - B1_Mus2 SINE Alu 0 147 2 4 994 220 53 26 26 chr17 53678643 53678682 -41593969 + (GGGA)n Simple_repeat Simple_repeat 4 42 0 4 994 1347 99 21 16 chr17 53678877 53679071 -41593580 - B2_Mm2 SINE B2 0 195 1 4 994 627 39 0 0 chr17 53679166 53679244 -41593407 + (TTCC)n Simple_repeat Simple_repeat 4 81 0 4 994 381 43 0 0 chr17 53679244 53679291 -41593360 + (TC)n Simple_repeat Simple_repeat 1 47 0 4 994 222 218 51 165 chr17 53679332 53679440 -41593211 + B4A SINE B4 1 88 -204 4 994 392 215 103 69 chr17 53679440 53679585 -41593066 + B1_Mur4 SINE Alu 1 150 0 4 994 1219 54 0 0 chr17 53679591 53679738 -41592913 + B1_Mus1 SINE Alu 2 148 0 4 994 282 56 0 0 chr17 53679749 53679785 -41592866 + (TAAAAA)n Simple_repeat Simple_repeat 5 40 0 4 994 285 250 11 74 chr17 53679824 53679919 -41592732 - MTE2a LTR MaLR -94 285 197 4 994 918 99 7 19 chr17 53679922 53680077 -41592574 + (TTC)n Simple_repeat Simple_repeat 2 154 0 4 994 631 245 139 65 chr17 53680365 53680566 -41592085 - B3 SINE B2 0 216 1 4 994 214 182 182 0 chr17 53680715 53680770 -41591881 + ID_B1 SINE B4 100 164 -60 4 994 215 214 0 0 chr17 53680786 53680828 -41591823 + A-rich Low_complexity Low_complexity 2 43 0 4 994 414 253 148 34 chr17 53680830 53681006 -41591645 + B3A SINE B2 3 198 0 4 994 312 274 49 0 chr17 53681048 53681150 -41591501 - PB1D10 SINE Alu -5 112 6 4 994 289 284 37 0 chr17 53681232 53681313 -41591338 + PB1D10 SINE Alu 27 110 -7 4 994 748 183 35 21 chr17 53681319 53681464 -41591187 + B1_Mur4 SINE Alu 1 147 -3 4 994 1119 65 0 7 chr17 53681474 53681614 -41591037 + B1_Mus1 SINE Alu 2 140 -8 4 994 354 61 0 0 chr17 53681614 53681663 -41590988 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 4 994 3622 202 81 35 chr17 53681738 53682583 -41590068 - RMER1A Other Other -1 1029 147 4 994 369 0 0 0 chr17 53682698 53682739 -41589912 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 994 973 47 147 0 chr17 53684032 53684161 -41588490 + B1_Mus1 SINE Alu 1 148 0 4 994 393 176 0 0 chr17 53684161 53684235 -41588416 + A-rich Low_complexity Low_complexity 1 74 0 4 994 266 273 127 46 chr17 53684245 53684307 -41588344 + Tigger7 DNA MER2_type 2218 2298 -193 4 994 609 214 17 0 chr17 53684307 53684424 -41588227 - PB1D9 SINE Alu -1 119 1 4 994 266 273 127 46 chr17 53684424 53684534 -41588117 + Tigger7 DNA MER2_type 2299 2404 -87 4 994 289 257 43 52 chr17 53684687 53684802 -41587849 + B1F1 SINE Alu 36 149 0 4 994 258 218 24 71 chr17 53684819 53684903 -41587748 + ID4 SINE ID 3 82 -1 4 994 1442 62 17 0 chr17 53685136 53685314 -41587337 + B2_Mm2 SINE B2 1 181 -14 4 994 185 0 40 0 chr17 53685428 53685453 -41587198 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 994 563 294 30 119 chr17 53685471 53685649 -41587002 + B3 SINE B2 3 182 -34 4 994 396 0 0 0 chr17 53685649 53685693 -41586958 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 994 373 294 30 119 chr17 53685693 53685715 -41586936 + B2_Mm2 SINE B2 170 185 -10 4 994 479 96 0 40 chr17 53685731 53685807 -41586844 + RMER10B LTR ERVL 1 73 -325 4 994 495 250 127 37 chr17 53685824 53686069 -41586582 + RLTR16 LTR ERVK 32 298 -207 4 994 548 168 63 98 chr17 53686367 53686572 -41586079 + RMER10B LTR ERVL 67 264 -134 4 994 872 205 51 5 chr17 53686578 53686774 -41585877 + RMER10B LTR ERVL 194 398 0 4 994 318 253 0 42 chr17 53686823 53686918 -41585733 - B1F SINE Alu -35 114 24 4 994 596 266 72 48 chr17 53687466 53687675 -41584976 - ID_B1 SINE B4 -10 214 1 4 994 243 0 0 0 chr17 53687698 53687725 -41584926 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 994 1498 37 26 11 chr17 53687789 53687949 -41584702 + B2_Mm1a SINE B2 1 160 -33 5 994 315 0 0 0 chr17 53687949 53687984 -41584667 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 5 994 1498 37 26 11 chr17 53687984 53688013 -41584638 + B2_Mm1a SINE B2 161 193 0 5 994 1646 31 5 0 chr17 53688021 53688212 -41584439 + B2_Mm1t SINE B2 2 193 0 5 994 1194 54 0 0 chr17 53688232 53688379 -41584272 + B1_Mus2 SINE Alu 1 147 0 5 994 189 107 0 0 chr17 53688379 53688407 -41584244 + (A)n Simple_repeat Simple_repeat 1 28 0 5 994 246 286 26 13 chr17 53688589 53688667 -41583984 + ID4 SINE ID 1 79 -4 5 994 1260 98 43 0 chr17 53688719 53688903 -41583748 + B2_Mm2 SINE B2 1 192 -3 5 994 611 117 4 51 chr17 53688939 53689062 -41583589 + B1_Mus2 SINE Alu 1 147 0 5 994 180 97 0 0 chr17 53689062 53689093 -41583558 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 5 994 1210 151 92 82 chr17 53689107 53689424 -41583227 + ORR1C2 LTR MaLR 33 352 -32 5 994 355 91 76 0 chr17 53689424 53689490 -41583161 + LTRIS5 LTR ERV1 1 71 -376 5 994 853 159 30 18 chr17 53689524 53689742 -41582909 + LTRIS5 LTR ERV1 228 512 0 5 994 207 180 0 39 chr17 53689994 53690046 -41582605 + A-rich Low_complexity Low_complexity 1 50 0 5 994 1379 87 16 0 chr17 53690167 53690351 -41582300 + B2_Mm2 SINE B2 2 188 -7 5 994 492 18 0 0 chr17 53690351 53690408 -41582243 + (GAAA)n Simple_repeat Simple_repeat 2 58 0 5 994 1674 42 0 0 chr17 53690408 53690601 -41582050 + B2_Mm1t SINE B2 1 193 0 5 994 264 59 0 0 chr17 53690601 53690635 -41582016 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 5 994 794 199 55 0 chr17 53690918 53691099 -41581552 - Zaphod DNA Tip100 -3502 529 339 5 994 685 68 58 0 chr17 53691986 53692089 -41580562 - L1_Mus4 LINE L1 -8 6628 6520 5 994 3873 64 0 2 chr17 53692104 53692587 -41580064 - L1Md_T LINE L1 0 6582 6101 5 994 705 176 66 0 chr17 53692656 53692792 -41579859 - B1_Mus2 SINE Alu -2 145 1 5 994 22 0 0 0 chr17 53692803 53692825 -41579826 + AT_rich Low_complexity Low_complexity 1 22 0 5 994 1300 14 0 0 chr17 53693076 53693223 -41579428 + B1_Mus2 SINE Alu 1 147 0 5 994 216 0 0 0 chr17 53693223 53693247 -41579404 + (A)n Simple_repeat Simple_repeat 1 24 0 5 994 373 289 54 8 chr17 53693578 53693707 -41578944 + B1F SINE Alu 7 141 -8 5 994 343 219 12 0 chr17 53693814 53693896 -41578755 - Tigger5 DNA MER2_type -138 2268 2186 5 994 467 282 38 8 chr17 53693904 53694036 -41578615 + RSINE1 SINE B4 7 142 -23 5 994 249 33 0 0 chr17 53694047 53694077 -41578574 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 994 261 0 0 0 chr17 53694079 53694108 -41578543 + (GA)n Simple_repeat Simple_repeat 2 30 0 5 994 261 0 0 0 chr17 53694109 53694138 -41578513 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 5 994 216 179 26 0 chr17 53694701 53694740 -41577911 - PB1D7 SINE Alu -73 47 8 5 994 483 63 0 0 chr17 53694754 53694817 -41577834 + (TC)n Simple_repeat Simple_repeat 2 64 0 5 994 25 31 0 0 chr17 53694887 53694919 -41577732 + AT_rich Low_complexity Low_complexity 1 32 0 5 994 366 219 0 0 chr17 53694964 53695037 -41577614 - B3A SINE B2 -118 80 8 5 994 296 242 65 21 chr17 53695142 53695235 -41577416 - PB1D10 SINE Alu 0 117 21 5 994 496 302 46 34 chr17 53695161 53695336 -41577315 - ID_B1 SINE B4 -47 177 1 5 994 308 312 31 10 chr17 53695773 53695870 -41576781 - B1F SINE Alu -41 108 10 5 994 22 0 0 0 chr17 53696007 53696029 -41576622 + AT_rich Low_complexity Low_complexity 1 22 0 5 994 216 186 0 0 chr17 53696029 53696088 -41576563 + A-rich Low_complexity Low_complexity 1 59 0 5 994 22 0 0 0 chr17 53696138 53696160 -41576491 + AT_rich Low_complexity Low_complexity 1 22 0 5 994 2505 63 9 0 chr17 53696255 53696586 -41576065 + L1Md_F2 LINE L1 6249 6582 0 5 994 1055 85 95 24 chr17 53697155 53697323 -41575328 + B2_Mm2 SINE B2 2 181 -14 5 994 1226 54 0 0 chr17 53697334 53697481 -41575170 - B1_Mus1 SINE Alu 0 148 2 5 994 602 13 39 0 chr17 53697497 53697574 -41575077 + (GAAAA)n Simple_repeat Simple_repeat 4 83 0 5 994 1327 69 17 0 chr17 53697574 53697748 -41574903 + B2_Mm1a SINE B2 2 178 -15 5 994 231 36 0 0 chr17 53697748 53697776 -41574875 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 5 994 926 136 7 20 chr17 53697989 53698139 -41574512 + B1_Mur4 SINE Alu 1 148 -2 5 994 1151 61 0 13 chr17 53698144 53698293 -41574358 + B1_Mm SINE Alu 1 147 0 5 994 874 207 76 9 chr17 53699061 53699271 -41573380 - ID_B1 SINE B4 0 224 1 5 994 520 139 97 53 chr17 53699293 53699407 -41573244 + PB1D9 SINE Alu 2 120 0 5 994 357 24 0 0 chr17 53699555 53699597 -41573054 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 994 1060 105 108 23 chr17 53699630 53699806 -41572845 + B2_Mm2 SINE B2 5 195 0 5 994 1200 62 0 0 chr17 53699807 53699953 -41572698 + B1_Mus2 SINE Alu 2 147 0 5 994 256 259 0 0 chr17 53699954 53700012 -41572639 + GA-rich Low_complexity Low_complexity 3 60 0 5 994 663 167 140 0 chr17 53700014 53700128 -41572523 - B1_Mus1 SINE Alu -17 131 2 5 994 411 100 0 0 chr17 53700206 53700276 -41572375 + (A)n Simple_repeat Simple_repeat 1 70 0 5 994 351 190 47 12 chr17 53700577 53700662 -41571989 - B1_Mur2 SINE Alu -41 108 21 5 994 2146 127 42 83 chr17 53700773 53701228 -41571423 - RLTR11B LTR ERVK 0 453 18 5 994 226 180 0 0 chr17 53701466 53701516 -41571135 + B3 SINE B2 167 216 0 5 994 323 222 24 36 chr17 53701545 53701629 -41571022 - B1_Mur2 SINE Alu -1 148 66 5 994 297 289 60 0 chr17 53701635 53701718 -41570933 - B1_Mur1 SINE Alu -2 147 60 5 994 1411 81 11 0 chr17 53701828 53702013 -41570638 - B2_Mm2 SINE B2 -8 187 1 5 994 362 328 31 0 chr17 53702351 53702479 -41570172 - B1F1 SINE Alu -17 132 1 5 994 794 238 43 0 chr17 53702649 53702834 -41569817 - B3 SINE B2 -6 210 18 5 994 3866 102 11 14 chr17 53702835 53703404 -41569247 + RMER2 LTR ERV1 1 567 0 5 994 204 67 0 0 chr17 53703437 53703467 -41569184 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 5 994 1115 71 0 0 chr17 53703470 53703610 -41569041 - B1_Mm SINE Alu -6 141 2 5 994 430 200 0 118 chr17 53703699 53703716 -41568935 + MT2B LTR ERVL 153 155 -446 5 994 928 63 0 0 chr17 53703716 53703842 -41568809 + B1_Mus1 SINE Alu 2 127 -21 5 994 742 142 0 23 chr17 53703917 53704047 -41568604 + B1_Mur4 SINE Alu 16 142 -8 5 994 574 86 65 0 chr17 53704226 53704319 -41568332 - B1_Mm SINE Alu -2 145 47 5 994 234 0 0 0 chr17 53704319 53704345 -41568306 + (T)n Simple_repeat Simple_repeat 1 26 0 5 994 752 40 0 0 chr17 53704825 53704925 -41567726 + B1_Mus2 SINE Alu 38 137 -10 5 994 886 114 0 0 chr17 53704986 53705117 -41567534 - B1_Mus1 SINE Alu 0 148 18 5 994 573 236 14 20 chr17 53705141 53705288 -41567363 - B1_Mur1 SINE Alu -2 147 2 5 994 26 0 0 0 chr17 53705291 53705317 -41567334 + AT_rich Low_complexity Low_complexity 1 26 0 5 994 419 0 20 0 chr17 53706001 53706052 -41566599 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 994 198 0 0 0 chr17 53706156 53706178 -41566473 + (A)n Simple_repeat Simple_repeat 1 22 0 5 994 31 44 0 0 chr17 53706543 53706588 -41566063 + GC_rich Low_complexity Low_complexity 1 45 0 5 994 319 227 80 30 chr17 53708057 53708157 -41564494 - MER5A1 DNA MER1_type -20 146 42 5 994 195 42 0 0 chr17 53709538 53709562 -41563089 + (T)n Simple_repeat Simple_repeat 1 24 0 5 994 261 0 0 0 chr17 53710122 53710151 -41562500 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 994 564 15 0 0 chr17 53710230 53710295 -41562356 + (CA)n Simple_repeat Simple_repeat 1 65 0 5 994 814 122 103 65 chr17 53710502 53710513 -41562138 - B2_Mm2 SINE B2 -3 192 182 5 994 1123 69 21 0 chr17 53710513 53710657 -41561994 - B1_Mus2 SINE Alu 0 147 1 5 994 814 122 103 65 chr17 53710657 53710682 -41561969 - B2_Mm2 SINE B2 -14 181 159 5 994 279 0 0 0 chr17 53710682 53710713 -41561938 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 5 994 814 122 103 65 chr17 53710713 53710859 -41561792 - B2_Mm2 SINE B2 -37 158 2 5 994 2058 176 122 12 chr17 53710860 53711286 -41561365 - Lx2B LINE L1 -20 6980 6508 5 994 1499 99 68 0 chr17 53711293 53711515 -41561136 - Lx4B LINE L1 -1179 5879 5643 5 994 538 42 0 0 chr17 53711840 53711912 -41560739 - BC1_Mm scRNA scRNA -80 72 1 5 994 1256 221 67 58 chr17 53712469 53712811 -41559840 - RLTR19-int LTR ERVK -1756 4381 4037 5 994 628 207 45 161 chr17 53712860 53713102 -41559549 - RLTR19-int LTR ERVK -2106 4031 3818 5 994 1706 229 100 102 chr17 53713114 53714065 -41558586 - RLTR19-int LTR ERVK -2565 3572 2624 5 994 405 169 0 11 chr17 53714098 53714185 -41558466 - RLTR19-int LTR ERVK -2944 3193 3135 5 994 718 222 55 71 chr17 53714202 53714498 -41558153 - RLTR19-int LTR ERVK -3556 2581 2047 5 994 984 56 26 72 chr17 53714501 53714654 -41557997 + B1_Mus2 SINE Alu 2 147 0 5 994 258 143 0 0 chr17 53714673 53714722 -41557929 - RLTR19-int LTR ERVK -3461 2061 2013 5 994 1438 90 47 9 chr17 53714747 53714961 -41557690 + L1Md_F2 LINE L1 6360 6581 -1 5 994 602 239 100 35 chr17 53714968 53715388 -41557263 - MTC-int LTR MaLR -729 1234 416 5 994 304 259 31 125 chr17 53715495 53715623 -41557028 - RLTR19-int LTR ERVK -3728 1794 1679 5 994 272 167 137 14 chr17 53715675 53715748 -41556903 - RLTR19-int LTR ERVK -5160 977 896 5 994 392 0 0 20 chr17 53715782 53715831 -41556820 + (TTA)n Simple_repeat Simple_repeat 2 49 0 5 994 692 214 116 28 chr17 53715831 53716047 -41556604 - RLTR42-int LTR ERVK -4183 1339 1105 5 994 469 277 36 0 chr17 53716973 53717110 -41555541 - B1F2 SINE Alu -6 143 2 5 994 399 260 24 31 chr17 53717453 53717580 -41555071 + B1F SINE Alu 24 149 0 5 994 254 29 29 0 chr17 53717678 53717713 -41554938 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 994 258 279 118 0 chr17 53717728 53717796 -41554855 - RSINE1 SINE B4 -2 163 88 5 994 368 244 16 70 chr17 53717937 53718065 -41554586 + B3A SINE B2 63 183 -15 5 994 468 111 0 0 chr17 53718205 53718277 -41554374 + (TG)n Simple_repeat Simple_repeat 2 73 0 5 994 624 148 0 0 chr17 53718787 53718895 -41553756 + (TC)n Simple_repeat Simple_repeat 1 108 0 6 994 605 141 96 52 chr17 53718911 53719046 -41553605 - B1_Mus1 SINE Alu -7 141 1 6 994 266 238 151 110 chr17 53719070 53719216 -41553435 - B4A SINE B4 0 292 141 6 994 294 312 21 0 chr17 53719230 53719323 -41553328 - B4A SINE B4 -196 96 2 6 994 567 277 0 7 chr17 53719525 53719663 -41552988 + ID_B1 SINE B4 84 220 -4 6 994 906 108 28 35 chr17 53720140 53720284 -41552367 - B1_Mur3 SINE Alu -2 147 5 6 994 358 284 14 17 chr17 53720289 53720398 -41552253 - PB1D9 SINE Alu 0 117 5 6 994 523 337 104 0 chr17 53720404 53720597 -41552054 - ID_B1 SINE B4 -3 221 9 6 994 631 217 8 15 chr17 53720763 53720894 -41551757 - B1_Mur2 SINE Alu -8 141 12 6 994 378 272 26 99 chr17 53720894 53720914 -41551737 - ID_B1 SINE B4 -8 216 77 6 994 192 77 0 0 chr17 53721032 53721058 -41551593 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 6 994 1146 82 0 0 chr17 53721059 53721205 -41551446 - B1_Mus1 SINE Alu -2 146 1 6 994 183 42 0 0 chr17 53721221 53721245 -41551406 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 994 272 224 29 43 chr17 53721260 53721330 -41551321 - RSINE1 SINE B4 -40 125 57 6 994 342 276 103 15 chr17 53721687 53721823 -41550828 + B1F1 SINE Alu 1 148 -1 6 994 411 247 65 0 chr17 53722330 53722423 -41550228 - ID_B1 SINE B4 -23 201 103 6 994 711 235 0 0 chr17 53722443 53722579 -41550072 + B1_Mur1 SINE Alu 2 137 -12 6 994 207 0 0 0 chr17 53722580 53722603 -41550048 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 994 505 203 211 0 chr17 53722641 53722764 -41549887 + B1_Mur4 SINE Alu 1 149 -1 6 994 21 36 0 0 chr17 53722913 53722941 -41549710 + AT_rich Low_complexity Low_complexity 1 28 0 6 994 1132 55 0 14 chr17 53723065 53723213 -41549438 - B1_Mm SINE Alu 0 147 2 6 994 492 230 90 41 chr17 53724085 53724230 -41548421 - RSINE1 SINE B4 0 165 14 6 994 366 23 0 0 chr17 53724642 53724685 -41547966 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 994 725 197 44 0 chr17 53724889 53725026 -41547625 - B1_Mm SINE Alu -3 144 2 6 994 1257 89 39 6 chr17 53725046 53725226 -41547425 - B2_Mm2 SINE B2 -8 187 2 6 994 522 271 23 8 chr17 53725256 53725386 -41547265 + B1F SINE Alu 1 132 -17 6 994 409 234 8 86 chr17 53725719 53725836 -41546815 + PB1D9 SINE Alu 6 113 -7 6 994 467 282 28 21 chr17 53726094 53726239 -41546412 - ID_B1 SINE B4 -1 223 78 6 994 215 317 96 19 chr17 53727021 53727172 -41545479 - L2a LINE L2 -40 3386 3201 6 994 433 210 48 48 chr17 53727318 53727423 -41545228 - PB1D7 SINE Alu -11 109 5 6 994 247 287 76 85 chr17 53727522 53727640 -41545011 + PB1 SINE Alu 11 127 0 6 994 293 250 78 31 chr17 53727823 53727951 -41544700 - ID_B1 SINE B4 -10 214 81 6 994 195 129 0 0 chr17 53728206 53728237 -41544414 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 6 994 1170 68 0 0 chr17 53728238 53728385 -41544266 - B1_Mus1 SINE Alu 0 148 2 6 994 770 209 92 0 chr17 53728392 53728588 -41544063 - B3 SINE B2 -2 214 1 6 994 661 230 22 0 chr17 53728625 53728764 -41543887 + B1_Mur1 SINE Alu 3 144 -5 6 994 251 132 29 29 chr17 53728971 53729041 -41543610 + GA-rich Low_complexity Low_complexity 2 71 0 6 994 816 19 0 0 chr17 53729180 53729284 -41543367 + B1_Mus2 SINE Alu 44 147 0 6 994 21 0 0 0 chr17 53729284 53729305 -41543346 + AT_rich Low_complexity Low_complexity 1 21 0 6 994 24 0 0 0 chr17 53729350 53729374 -41543277 + AT_rich Low_complexity Low_complexity 1 24 0 6 994 929 16 0 8 chr17 53729957 53730079 -41542572 + B1_Mus1 SINE Alu 28 148 0 6 994 435 119 0 0 chr17 53730085 53730152 -41542499 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 6 994 361 185 183 25 chr17 53730245 53730351 -41542300 + B1F SINE Alu 18 140 -9 6 994 356 164 81 14 chr17 53730374 53730448 -41542203 + PB1D7 SINE Alu 27 105 -15 6 994 1232 244 44 10 chr17 53730495 53730789 -41541862 - Lx8 LINE L1 -371 7102 6799 6 994 303 286 19 19 chr17 53730798 53730905 -41541746 + PB1D7 SINE Alu 13 119 -1 6 994 1141 68 0 27 chr17 53731209 53731359 -41541292 + B1_Mm SINE Alu 2 147 0 6 994 189 0 0 0 chr17 53731364 53731385 -41541266 + (A)n Simple_repeat Simple_repeat 1 21 0 6 994 800 209 62 31 chr17 53731385 53731578 -41541073 - B3 SINE B2 -12 204 6 6 994 1330 219 93 9 chr17 53731661 53731993 -41540658 - MTD LTR MaLR -52 367 8 6 994 1348 90 16 0 chr17 53732038 53732226 -41540425 - B2_Mm1a SINE B2 -2 191 1 6 994 718 224 91 25 chr17 53732328 53732525 -41540126 + B3 SINE B2 1 210 -6 6 994 528 168 0 0 chr17 53732529 53732630 -41540021 + (TAGA)n Simple_repeat Simple_repeat 4 104 0 6 994 565 212 53 8 chr17 53732790 53732923 -41539728 - B1_Mus1 SINE Alu 0 148 10 6 994 285 271 72 10 chr17 53732843 53732940 -41539711 - B4 SINE B4 -113 179 77 6 994 219 139 0 0 chr17 53732964 53733000 -41539651 + (TAGA)n Simple_repeat Simple_repeat 4 39 0 6 994 256 336 69 15 chr17 53733008 53733138 -41539513 - RSINE1 SINE B4 -28 137 1 6 994 238 146 0 0 chr17 53733164 53733205 -41539446 - Lx8 LINE L1 -16 7457 7417 6 994 525 234 108 0 chr17 53733204 53733362 -41539289 - L1MB3 LINE L1 -209 5974 5800 6 994 266 50 25 0 chr17 53733411 53733451 -41539200 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 994 300 248 102 58 chr17 53733464 53733601 -41539050 - L1MB3 LINE L1 -377 5806 5664 6 994 747 236 48 11 chr17 53733934 53734122 -41538529 - B3A SINE B2 -3 195 1 6 994 412 157 0 33 chr17 53734175 53734267 -41538384 + CT-rich Low_complexity Low_complexity 2 90 0 6 994 422 221 13 25 chr17 53734291 53734449 -41538202 + CT-rich Low_complexity Low_complexity 2 157 0 6 994 903 34 0 0 chr17 53734547 53734664 -41537987 - B1_Mus1 SINE Alu 0 148 32 6 994 758 234 45 5 chr17 53734695 53734893 -41537758 - B3 SINE B2 -10 206 1 6 994 477 283 40 40 chr17 53734958 53735109 -41537542 - RSINE1 SINE B4 0 165 15 6 994 30 27 0 0 chr17 53736194 53736231 -41536420 + AT_rich Low_complexity Low_complexity 1 37 0 6 994 314 231 26 0 chr17 53736233 53736311 -41536340 - ID4_ SINE ID 0 83 4 6 994 509 282 0 31 chr17 53736652 53736780 -41535871 - B1F SINE Alu -20 129 6 6 994 1404 70 0 0 chr17 53736866 53737053 -41535598 + L1_Mus2 LINE L1 6379 6565 -1 6 994 270 0 0 0 chr17 53737205 53737235 -41535416 + (CTG)n Simple_repeat Simple_repeat 2 31 0 6 994 750 244 0 0 chr17 53737235 53737473 -41535178 + CT-rich Low_complexity Low_complexity 1 238 0 6 994 288 125 0 0 chr17 53737414 53737454 -41535197 + (TCC)n Simple_repeat Simple_repeat 3 42 0 6 994 31 44 0 0 chr17 53738570 53738615 -41534036 + AT_rich Low_complexity Low_complexity 1 45 0 6 994 473 266 98 0 chr17 53738623 53738766 -41533885 - RSINE1 SINE B4 -6 159 3 6 994 469 282 0 25 chr17 53738776 53738896 -41533755 - PB1D10 SINE Alu 0 117 1 6 994 431 286 18 58 chr17 53738939 53739110 -41533541 - RSINE1 SINE B4 0 165 2 6 994 674 255 0 0 chr17 53739300 53739445 -41533206 - B1_Mur2 SINE Alu 0 149 5 6 124 301 303 101 0 chr17 53739461 53739560 -41533091 - PB1D10 SINE Alu -2 115 7 6 124 359 293 86 37 chr17 53739480 53739643 -41533008 - ID_B1 SINE B4 -49 175 5 6 995 1104 168 96 15 chr17 53740362 53740561 -41532090 - B3 SINE B2 0 216 2 6 995 403 234 0 0 chr17 53740686 53740770 -41531881 - ID4 SINE ID -62 90 7 6 995 290 266 44 44 chr17 53740814 53740928 -41531723 - B1F SINE Alu -34 115 2 6 995 324 279 265 38 chr17 53740991 53741229 -41531422 - B4A SINE B4 0 292 1 6 995 333 0 0 0 chr17 53741252 53741289 -41531362 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 995 564 235 65 43 chr17 53741290 53741428 -41531223 - B1_Mus2 SINE Alu -6 141 1 6 995 183 42 0 0 chr17 53741888 53741912 -41530739 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 995 1503 40 6 0 chr17 53741922 53742096 -41530555 - B2_Mm1t SINE B2 -18 175 1 6 995 676 211 13 52 chr17 53742100 53742255 -41530396 - B1_Mur3 SINE Alu 0 149 1 6 995 611 254 56 0 chr17 53743205 53743347 -41529304 + B1_Mur4 SINE Alu 1 150 0 6 995 375 292 117 54 chr17 53743387 53743626 -41529025 - LTR73 LTR ERV1 -285 287 34 6 995 32 26 0 0 chr17 53744282 53744321 -41528330 + AT_rich Low_complexity Low_complexity 1 39 0 6 995 1585 47 5 15 chr17 53744747 53744942 -41527709 - B2_Mm1t SINE B2 0 193 1 6 995 676 211 13 52 chr17 53744946 53745101 -41527550 - B1_Mur3 SINE Alu 0 149 1 6 995 611 254 56 0 chr17 53746051 53746193 -41526458 + B1_Mur4 SINE Alu 1 150 0 6 995 375 292 117 54 chr17 53746233 53746472 -41526179 - LTR73 LTR ERV1 -285 287 34 6 995 194 0 0 37 chr17 53747128 53747155 -41525496 + (TTA)n Simple_repeat Simple_repeat 1 26 0 6 995 183 42 0 0 chr17 53747583 53747607 -41525044 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 995 1503 40 6 0 chr17 53747617 53747791 -41524860 - B2_Mm1t SINE B2 -18 175 1 6 995 676 211 13 52 chr17 53747795 53747950 -41524701 - B1_Mur3 SINE Alu 0 149 1 6 995 611 254 56 0 chr17 53748900 53749042 -41523609 + B1_Mur4 SINE Alu 1 150 0 6 995 375 292 117 54 chr17 53749082 53749321 -41523330 - LTR73 LTR ERV1 -285 287 34 6 995 32 26 0 0 chr17 53749977 53750016 -41522635 + AT_rich Low_complexity Low_complexity 1 39 0 7 995 22 35 0 0 chr17 53750666 53750695 -41521956 + AT_rich Low_complexity Low_complexity 1 29 0 7 995 737 193 7 0 chr17 53750696 53750831 -41521820 - B1_Mur3 SINE Alu -12 137 2 7 995 692 214 35 18 chr17 53750831 53750993 -41521658 - B3 SINE B2 -50 166 2 7 995 756 58 0 0 chr17 53751007 53751110 -41521541 - B1_Mus2 SINE Alu 0 147 45 7 995 288 0 0 0 chr17 53751110 53751142 -41521509 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 995 237 271 22 66 chr17 53751625 53751716 -41520935 - L5 LINE RTE -155 2110 2024 7 995 420 55 0 0 chr17 53752109 53752164 -41520487 + (TTTCC)n Simple_repeat Simple_repeat 2 56 0 7 995 246 62 0 0 chr17 53752233 53752265 -41520386 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 7 995 243 239 0 0 chr17 53752347 53752393 -41520258 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 995 2738 66 42 5 chr17 53752740 53753119 -41519532 + L1_Mus4 LINE L1 6243 6635 -1 7 995 428 151 850 0 chr17 53753138 53753258 -41519393 - URR1B DNA MER1_type -2 223 2 7 995 245 288 24 36 chr17 53753690 53753701 -41518950 - B4A SINE B4 -205 87 6 7 995 316 306 0 0 chr17 53753701 53753773 -41518878 - ID4_ SINE ID -6 77 6 7 995 459 0 0 0 chr17 53753774 53753825 -41518826 + (TCTA)n Simple_repeat Simple_repeat 1 51 0 7 995 268 209 102 23 chr17 53754042 53754130 -41518521 + B4 SINE B4 3 97 -195 7 995 1594 174 0 3 chr17 53754135 53754424 -41518227 + ORR1A1 LTR MaLR 1 288 -58 7 995 1107 36 66 0 chr17 53754424 53754561 -41518090 + B1_Mus2 SINE Alu 2 147 0 7 995 237 65 0 0 chr17 53754561 53754592 -41518059 + (A)n Simple_repeat Simple_repeat 1 31 0 7 995 463 248 15 39 chr17 53754633 53754763 -41517888 + B4A SINE B4 104 230 -62 7 995 207 0 0 0 chr17 53754778 53754801 -41517850 + (CAA)n Simple_repeat Simple_repeat 2 24 0 7 995 475 278 22 15 chr17 53754822 53754957 -41517694 + B1_Mur1 SINE Alu 14 149 0 7 995 888 160 223 0 chr17 53755142 53755317 -41517334 - B3 SINE B2 0 216 3 7 995 553 207 0 8 chr17 53755444 53755561 -41517090 - PB1D9 SINE Alu 0 120 5 7 995 279 0 0 0 chr17 53755697 53755728 -41516923 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 7 995 239 345 53 35 chr17 53755983 53756097 -41516554 - PB1D10 SINE Alu 0 117 2 7 995 330 26 0 0 chr17 53756295 53756334 -41516317 + (TTCC)n Simple_repeat Simple_repeat 3 41 0 7 995 319 149 80 13 chr17 53756815 53756884 -41515767 - ORR1D1 LTR MaLR 0 374 301 7 995 1095 84 0 0 chr17 53756884 53757038 -41515613 + B2_Mm2 SINE B2 1 154 -41 7 995 604 234 269 5 chr17 53757069 53757288 -41515363 - ORR1D1 LTR MaLR -86 288 12 7 995 186 103 0 0 chr17 53757492 53757521 -41515130 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 995 229 297 78 19 chr17 53757725 53757828 -41514823 - PB1D10 SINE Alu 0 117 9 7 995 591 274 7 0 chr17 53758132 53758267 -41514384 + B1_Mur1 SINE Alu 7 142 -7 7 995 785 123 0 58 chr17 53758634 53758824 -41513827 + CT-rich Low_complexity Low_complexity 2 180 0 7 995 641 152 129 0 chr17 53758839 53758971 -41513680 - B1_Mur3 SINE Alu 0 149 1 7 995 1136 73 0 0 chr17 53759003 53759140 -41513511 - B1_Mus1 SINE Alu -11 137 1 7 995 1671 26 5 0 chr17 53759151 53759343 -41513308 - B2_Mm1t SINE B2 0 193 1 7 995 601 183 20 53 chr17 53759368 53759518 -41513133 + RMER1C Other Other 1196 1340 -2 7 995 699 197 24 79 chr17 53759559 53759724 -41512927 - B3 SINE B2 -27 189 34 7 995 326 264 85 62 chr17 53760199 53760212 -41512439 + B4 SINE B4 68 83 -209 7 995 531 252 0 59 chr17 53760212 53760347 -41512304 + B1F2 SINE Alu 3 129 -20 7 995 713 216 0 0 chr17 53760475 53760614 -41512037 + B1_Mur1 SINE Alu 1 139 -10 7 995 189 74 0 0 chr17 53760615 53760642 -41512009 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 7 995 668 208 0 71 chr17 53760648 53760803 -41511848 + B1_Mur3 SINE Alu 5 148 -1 7 995 975 228 24 5 chr17 53761782 53761994 -41510657 - B3 SINE B2 0 216 1 7 995 233 283 50 0 chr17 53762093 53762153 -41510498 - ID4 SINE ID -11 72 10 7 995 598 279 96 10 chr17 53762177 53762376 -41510275 + B3 SINE B2 1 216 0 7 995 301 154 0 37 chr17 53762394 53762448 -41510203 + L1MA8 LINE L1 6108 6159 -132 7 995 450 0 0 0 chr17 53762459 53762509 -41510142 + (TC)n Simple_repeat Simple_repeat 1 50 0 7 995 216 0 0 0 chr17 53762509 53762532 -41510119 + (CA)n Simple_repeat Simple_repeat 1 24 0 7 995 478 243 19 0 chr17 53762544 53762651 -41510000 + B1_Mur1 SINE Alu 41 149 0 7 995 229 301 193 0 chr17 53762940 53763023 -41509628 - PB1D10 SINE Alu -18 99 1 7 995 285 51 0 0 chr17 53763151 53763190 -41509461 + (TG)n Simple_repeat Simple_repeat 1 39 0 7 995 272 320 29 29 chr17 53763219 53763322 -41509329 - RSINE1 SINE B4 -61 104 2 7 995 419 296 41 7 chr17 53763337 53763483 -41509168 - RSINE1 SINE B4 -13 152 2 7 995 237 309 44 35 chr17 53763487 53763601 -41509050 - PB1D10 SINE Alu 0 117 3 7 995 21 0 0 0 chr17 53763836 53763857 -41508794 + AT_rich Low_complexity Low_complexity 1 21 0 7 995 604 319 13 6 chr17 53763874 53764032 -41508619 - RSINE1 SINE B4 -1 164 6 7 995 270 0 0 0 chr17 53764060 53764090 -41508561 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 7 995 1087 96 7 0 chr17 53764090 53764236 -41508415 - B1_Mus1 SINE Alu -1 147 1 7 995 729 282 11 16 chr17 53764266 53764450 -41508201 - B3A SINE B2 -15 183 1 7 995 292 259 46 23 chr17 53764479 53764566 -41508085 - ID_B1 SINE B4 -36 188 100 7 995 1464 55 33 0 chr17 53764969 53765152 -41507499 + B2_Mm2 SINE B2 3 191 -4 7 995 859 223 44 19 chr17 53765407 53765613 -41507038 + B3 SINE B2 2 212 -4 7 995 207 215 0 0 chr17 53765745 53765810 -41506841 + T-rich Low_complexity Low_complexity 1 65 0 7 995 1175 42 7 0 chr17 53765811 53765955 -41506696 - B1_Mm SINE Alu -1 146 2 7 995 925 173 0 0 chr17 53765974 53766124 -41506527 - B1_Mur4 SINE Alu 0 150 1 7 995 207 0 0 0 chr17 53766166 53766189 -41506462 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 995 185 210 0 16 chr17 53766565 53766628 -41506023 + CT-rich Low_complexity Low_complexity 3 64 0 7 995 562 257 7 20 chr17 53767192 53767339 -41505312 - B1F SINE Alu 0 149 5 7 995 406 217 112 9 chr17 53767538 53767645 -41505006 - ID_B1 SINE B4 -3 221 104 7 995 501 17 0 0 chr17 53768132 53768190 -41504461 + (TG)n Simple_repeat Simple_repeat 2 59 0 7 995 590 224 0 49 chr17 53768446 53768568 -41504083 + PB1D10 SINE Alu 2 117 0 7 995 868 89 0 0 chr17 53768946 53769070 -41503581 + B2_Mm2 SINE B2 1 124 -71 7 995 8629 25 0 3 chr17 53769241 53770584 -41502067 - L1Md_A LINE L1 0 6582 5269 7 995 1041 258 41 105 chr17 53770754 53771144 -41501507 - MTE2a LTR MaLR -14 365 1 7 995 1009 143 0 0 chr17 53771217 53771364 -41501287 - B1_Mus1 SINE Alu -1 147 1 7 995 225 0 0 0 chr17 53772180 53772205 -41500446 + (TTAA)n Simple_repeat Simple_repeat 4 28 0 7 995 411 299 43 21 chr17 53772231 53772371 -41500280 - RSINE1 SINE B4 -22 143 1 7 995 508 238 36 65 chr17 53772473 53772612 -41500039 + B1_Mur1 SINE Alu 14 148 -1 7 995 291 202 146 0 chr17 53772822 53772911 -41499740 - PB1D10 SINE Alu -6 111 10 7 995 995 135 6 0 chr17 53772955 53773125 -41499526 + (GAAA)n Simple_repeat Simple_repeat 3 173 0 7 995 629 172 141 0 chr17 53773321 53773449 -41499202 + B1_Mm SINE Alu 1 146 -1 7 995 246 42 62 0 chr17 53773453 53773501 -41499150 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 7 995 198 26 77 0 chr17 53773505 53773544 -41499107 + (CAAAC)n Simple_repeat Simple_repeat 5 46 0 7 995 249 270 69 10 chr17 53774327 53774428 -41498223 + PB1D10 SINE Alu 11 117 0 7 995 455 148 25 0 chr17 53774528 53774609 -41498042 + B1_Mur1 SINE Alu 57 139 -10 7 995 240 35 0 0 chr17 53774609 53774638 -41498013 + (CCAA)n Simple_repeat Simple_repeat 2 30 0 7 995 214 132 0 50 chr17 53774806 53774846 -41497805 + (TATG)n Simple_repeat Simple_repeat 1 38 0 7 995 923 135 6 0 chr17 53774846 53775002 -41497649 + (TCTA)n Simple_repeat Simple_repeat 4 160 0 7 995 865 200 27 68 chr17 53775061 53775281 -41497370 + B3 SINE B2 5 215 -1 7 995 407 293 20 0 chr17 53775337 53775436 -41497215 + PB1D7 SINE Alu 12 112 -8 7 995 251 354 0 12 chr17 53775527 53775607 -41497044 - PB1D10 SINE Alu -31 86 8 7 995 21 0 0 0 chr17 53775769 53775790 -41496861 + AT_rich Low_complexity Low_complexity 1 21 0 7 995 456 104 0 0 chr17 53776291 53776358 -41496293 + (TG)n Simple_repeat Simple_repeat 1 67 0 7 995 336 281 0 88 chr17 53776368 53776481 -41496170 - PB1D10 SINE Alu -9 108 6 7 995 414 0 0 0 chr17 53776627 53776673 -41495978 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 7 995 324 242 0 0 chr17 53776681 53776747 -41495904 - ID4 SINE ID -16 67 2 7 995 198 0 0 0 chr17 53776768 53776790 -41495861 + (T)n Simple_repeat Simple_repeat 1 22 0 7 995 707 115 80 24 chr17 53778492 53778617 -41494034 - B1_Mur4 SINE Alu 0 150 19 7 995 360 281 26 9 chr17 53778659 53778774 -41493877 - PB1D10 SINE Alu 0 117 1 7 995 925 216 19 19 chr17 53779659 53779871 -41492780 - B3 SINE B2 -4 212 1 7 995 585 229 122 19 chr17 53779914 53779989 -41492662 - Lx8 LINE L1 -34 7439 7346 8 995 1279 27 0 0 chr17 53779989 53780137 -41492514 - B1_Mus1 SINE Alu 0 148 1 8 995 630 241 196 14 chr17 53780137 53780468 -41492183 - Lx8 LINE L1 -128 7345 6966 8 995 1106 277 30 68 chr17 53780960 53781012 -41491639 - ORR1E LTR MaLR -2 357 315 8 995 1689 26 0 0 chr17 53781012 53781201 -41491450 + B2_Mm1a SINE B2 2 190 -3 8 995 1106 277 30 68 chr17 53781201 53781516 -41491135 - ORR1E LTR MaLR -45 314 4 8 995 234 353 0 10 chr17 53782041 53782144 -41490507 + Tigger14a DNA MER2_type 48 149 -175 8 995 237 83 0 0 chr17 53782773 53782809 -41489842 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 995 955 287 50 32 chr17 53782837 53783179 -41489472 - ORR1E LTR MaLR -11 348 1 8 995 1209 133 39 0 chr17 53784264 53784445 -41488206 - B2_Mm2 SINE B2 -6 189 2 8 995 611 200 58 0 chr17 53785174 53785294 -41487357 - B1_Mur3 SINE Alu -19 130 4 8 995 366 239 0 0 chr17 53785330 53785401 -41487250 + ID2 SINE ID 2 72 -11 8 995 210 238 0 0 chr17 53785412 53785454 -41487197 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 995 245 359 39 0 chr17 53785565 53785688 -41486963 + ID_B1 SINE B4 79 204 -20 8 995 25 31 0 0 chr17 53785910 53785942 -41486709 + AT_rich Low_complexity Low_complexity 1 32 0 8 995 735 194 7 0 chr17 53786035 53786174 -41486477 + B1_Mus1 SINE Alu 8 147 -1 8 995 604 302 28 52 chr17 53786213 53786461 -41486190 - B4A SINE B4 -46 246 5 8 995 1241 48 0 0 chr17 53786621 53786767 -41485884 + B1_Mus2 SINE Alu 2 147 0 8 995 237 108 0 0 chr17 53786767 53786804 -41485847 + (A)n Simple_repeat Simple_repeat 1 37 0 8 995 257 260 0 0 chr17 53787005 53787055 -41485596 - ID_B1 SINE B4 -40 184 135 8 995 265 47 47 0 chr17 53787087 53787130 -41485521 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 8 995 643 246 10 22 chr17 53787153 53787358 -41485293 + B3A SINE B2 2 205 -11 8 995 293 358 0 0 chr17 53787525 53787606 -41485045 + PB1D7 SINE Alu 7 87 -33 8 995 1017 130 0 0 chr17 53787606 53787768 -41484883 + (CA)n Simple_repeat Simple_repeat 1 162 0 8 995 293 355 0 21 chr17 53787768 53787781 -41484870 + B1F1 SINE Alu 88 99 -50 8 995 236 100 25 0 chr17 53787810 53787850 -41484801 + (TA)n Simple_repeat Simple_repeat 2 42 0 8 995 183 42 0 0 chr17 53787896 53787920 -41484731 + (CA)n Simple_repeat Simple_repeat 2 25 0 8 995 216 111 0 0 chr17 53788453 53788489 -41484162 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 8 995 538 162 8 8 chr17 53789132 53789250 -41483401 + CT-rich Low_complexity Low_complexity 2 119 0 8 995 330 266 41 23 chr17 53789251 53789419 -41483232 - ID_B1 SINE B4 0 224 1 8 995 207 0 0 0 chr17 53790343 53790366 -41482285 + (TTA)n Simple_repeat Simple_repeat 2 24 0 8 995 387 364 26 7 chr17 53790388 53790540 -41482111 - RSINE1 SINE B4 -8 157 3 8 995 741 270 10 35 chr17 53790780 53790983 -41481668 - B3A SINE B2 0 198 1 8 995 722 245 52 52 chr17 53791101 53791312 -41481339 - B3 SINE B2 -5 211 1 8 995 180 0 0 0 chr17 53791417 53791437 -41481214 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 8 995 273 276 13 0 chr17 53791519 53791595 -41481056 - B4A SINE B4 -214 78 2 8 995 419 220 11 11 chr17 53791655 53791747 -41480904 + PB1D10 SINE Alu 24 115 -2 8 995 507 349 28 39 chr17 53791870 53792153 -41480498 - B4A SINE B4 -10 282 3 8 995 326 266 0 25 chr17 53793025 53793097 -41479554 + ID4_ SINE ID 3 74 -9 8 995 345 47 0 0 chr17 53793097 53793140 -41479511 + (CAAT)n Simple_repeat Simple_repeat 3 45 0 8 995 345 47 0 0 chr17 53794187 53794230 -41478421 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 995 576 212 78 28 chr17 53794316 53794457 -41478194 + B1_Mur2 SINE Alu 1 148 -1 8 995 684 157 228 6 chr17 53794771 53794938 -41477713 - URR1A DNA MER1_type -12 214 11 8 995 397 270 15 31 chr17 53795219 53795349 -41477302 - MER33 DNA MER1_type -196 128 1 8 995 928 195 10 14 chr17 53795757 53795965 -41476686 - RMER15 LTR ERVL -140 435 229 8 995 998 174 15 35 chr17 53796203 53796406 -41476245 + URR1B DNA MER1_type 27 225 0 8 995 397 197 0 0 chr17 53796677 53796748 -41475903 - B3 SINE B2 -145 71 1 8 995 252 196 54 0 chr17 53796886 53796942 -41475709 + B1_Mus2 SINE Alu 1 59 -88 8 995 381 236 0 0 chr17 53796953 53797101 -41475550 + GA-rich Low_complexity Low_complexity 2 149 0 8 995 300 111 0 0 chr17 53797104 53797149 -41475502 + B1_Mur4 SINE Alu 41 85 -65 8 995 324 179 112 9 chr17 53797192 53797299 -41475352 - MER33 DNA MER1_type -51 273 156 8 995 307 182 0 0 chr17 53798770 53798825 -41473826 - HAL1-3A_ME LINE L1 -828 2030 1976 8 995 22 0 0 0 chr17 53798940 53798962 -41473689 + AT_rich Low_complexity Low_complexity 1 22 0 8 995 270 0 0 0 chr17 53799030 53799060 -41473591 + (TG)n Simple_repeat Simple_repeat 2 31 0 8 995 195 42 0 0 chr17 53799608 53799632 -41473019 + (CG)n Simple_repeat Simple_repeat 2 25 0 8 995 1160 54 0 20 chr17 53799678 53799828 -41472823 - B1_Mm SINE Alu 0 147 1 8 995 1185 48 7 7 chr17 53800107 53800254 -41472397 + B1_Mus1 SINE Alu 2 148 0 8 995 1180 254 123 78 chr17 53801272 53801759 -41470892 - Lx8 LINE L1 -1 7472 6964 8 995 485 290 11 80 chr17 53802523 53802699 -41469952 - RSINE1 SINE B4 0 165 2 8 995 198 0 0 0 chr17 53802994 53803016 -41469635 + (A)n Simple_repeat Simple_repeat 1 22 0 8 995 284 267 59 0 chr17 53803139 53803240 -41469411 + PB1D7 SINE Alu 1 107 -13 8 995 24 0 0 0 chr17 53804041 53804065 -41468586 + AT_rich Low_complexity Low_complexity 1 24 0 8 995 501 260 8 8 chr17 53805577 53805705 -41466946 + B3 SINE B2 2 129 -87 8 995 2009 166 50 0 chr17 53805722 53806083 -41466568 - ORR1C2 LTR MaLR -5 379 1 8 995 540 271 15 0 chr17 53806125 53806258 -41466393 - B1F1 SINE Alu -13 136 2 8 995 217 382 0 14 chr17 53806498 53806567 -41466084 - RSINE1 SINE B4 -96 69 2 8 995 215 170 21 0 chr17 53807062 53807109 -41465542 + (TG)n Simple_repeat Simple_repeat 1 48 0 8 995 466 287 5 86 chr17 53807109 53807307 -41465344 - B3A SINE B2 -16 182 1 8 995 252 0 0 0 chr17 53807889 53807917 -41464734 + (TG)n Simple_repeat Simple_repeat 2 29 0 8 995 462 271 43 36 chr17 53807926 53808033 -41464618 - RSINE1 SINE B4 -4 161 54 8 995 1035 69 7 0 chr17 53808033 53808177 -41464474 + B1_Mus2 SINE Alu 3 147 0 8 995 23 33 0 0 chr17 53808474 53808504 -41464147 + AT_rich Low_complexity Low_complexity 1 30 0 8 995 643 179 146 0 chr17 53808539 53808662 -41463989 - B1_Mus2 SINE Alu -6 141 1 8 995 647 226 58 58 chr17 53808679 53808886 -41463765 - B3 SINE B2 -9 207 1 8 995 229 236 194 0 chr17 53808937 53809009 -41463642 - PB1D7 SINE Alu -4 116 31 8 995 233 362 0 0 chr17 53809118 53809187 -41463464 - B3A SINE B2 -105 93 25 8 995 1012 254 0 18 chr17 53809215 53809432 -41463219 + B3 SINE B2 3 215 -1 8 995 301 246 121 101 chr17 53812249 53812398 -41460253 + B3A SINE B2 47 198 0 8 995 2970 55 62 20 chr17 53812566 53812971 -41459680 - L1Md_F2 LINE L1 -14 6568 6147 8 995 243 0 0 0 chr17 53813420 53813447 -41459204 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 995 21 71 0 0 chr17 53814213 53814255 -41458396 + AT_rich Low_complexity Low_complexity 1 42 0 8 995 378 198 122 20 chr17 53819370 53819468 -41453183 + PB1D9 SINE Alu 13 120 0 8 995 270 234 30 69 chr17 53819979 53820048 -41452603 - PB1D10 SINE Alu -1 116 51 8 995 1742 176 119 26 chr17 53820048 53820433 -41452218 + MTC LTR MaLR 1 421 0 8 995 270 234 30 69 chr17 53820433 53820464 -41452187 - PB1D10 SINE Alu -67 50 20 8 995 972 67 88 7 chr17 53820545 53820681 -41451970 + B1_Mm SINE Alu 1 147 0 8 995 298 279 93 0 chr17 53821704 53821790 -41450861 - PB1D10 SINE Alu 0 117 24 8 995 561 237 118 26 chr17 53821892 53822087 -41450564 + Lx7 LINE L1 7200 7412 -284 8 995 235 211 0 0 chr17 53822272 53822295 -41450356 + A-rich Low_complexity Low_complexity 1 23 0 8 995 1188 61 0 0 chr17 53822295 53822443 -41450208 + B1_Mus1 SINE Alu 1 148 0 8 995 235 211 0 0 chr17 53822443 53822476 -41450175 + A-rich Low_complexity Low_complexity 24 56 0 8 995 225 264 72 45 chr17 53823041 53823152 -41449499 - L2a LINE L2 -12 3414 3301 8 995 312 282 83 15 chr17 53823181 53823314 -41449337 + RSINE1 SINE B4 9 150 -15 8 995 185 333 219 31 chr17 53823474 53823830 -41448821 - L2a LINE L2 -337 3082 2660 8 995 332 260 41 0 chr17 53824061 53824181 -41448470 + B1F SINE Alu 17 142 -7 8 995 452 256 22 43 chr17 53824435 53824574 -41448077 - B1_Mur1 SINE Alu -11 138 3 8 995 280 222 16 189 chr17 53824886 53825008 -41447643 - RSINE1 SINE B4 -31 134 34 8 995 371 253 0 37 chr17 53825055 53825137 -41447514 - ID4_ SINE ID -3 80 2 8 995 478 213 83 0 chr17 53825176 53825284 -41447367 + B1F SINE Alu 32 148 -1 8 995 631 250 32 54 chr17 53825585 53825771 -41446880 + B3A SINE B2 1 182 -16 8 995 404 19 19 0 chr17 53825781 53825834 -41446817 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 995 288 253 86 159 chr17 53826655 53826970 -41445681 + B4A SINE B4 1 292 0 8 995 257 268 68 23 chr17 53827373 53827461 -41445190 + PB1D10 SINE Alu 26 117 0 8 995 470 223 11 18 chr17 53827652 53827763 -41444888 - PB1 SINE Alu -4 123 12 8 995 252 296 10 0 chr17 53828851 53828879 -41443772 + ID SINE ID 55 83 -141 9 995 302 257 4 12 chr17 53828879 53828974 -41443677 + PB1D10 SINE Alu 3 99 -21 9 995 299 197 0 15 chr17 53829711 53829778 -41442873 - ID_B1 SINE B4 -1 223 158 9 995 573 266 8 0 chr17 53829778 53829906 -41442745 - B1_Mur3 SINE Alu -20 129 1 9 995 222 37 0 0 chr17 53829947 53829974 -41442677 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 9 995 279 354 26 0 chr17 53829978 53830091 -41442560 - B1_Mur1 SINE Alu -10 139 24 9 995 212 273 50 38 chr17 53830117 53830197 -41442454 + B4A SINE B4 1 81 -211 9 995 677 238 20 61 chr17 53830126 53830323 -41442328 + B3A SINE B2 10 198 0 9 995 1761 152 34 34 chr17 53830736 53831063 -41441588 + ORR1A4 LTR MaLR 1 327 -2 9 995 597 217 29 14 chr17 53831085 53831225 -41441426 - B1F2 SINE Alu -1 148 7 9 995 589 256 161 79 chr17 53831247 53831552 -41441099 + ORR1E LTR MaLR 19 348 -11 9 995 720 87 0 17 chr17 53831594 53831711 -41440940 - BC1_Mm scRNA scRNA -37 115 1 9 995 227 222 0 0 chr17 53831671 53831716 -41440935 - ZP3AR Satellite Satellite -130 82 38 9 995 459 278 144 6 chr17 53831820 53832001 -41440650 - B3 SINE B2 -6 210 5 9 995 24 53 0 0 chr17 53832010 53832048 -41440603 + AT_rich Low_complexity Low_complexity 1 38 0 9 995 334 159 98 45 chr17 53832081 53832193 -41440458 + Lx7 LINE L1 7579 7696 0 9 995 22 0 0 0 chr17 53832277 53832299 -41440352 + AT_rich Low_complexity Low_complexity 1 22 0 9 995 439 117 65 0 chr17 53832316 53832393 -41440258 - B1_Mus2 SINE Alu 0 147 66 9 995 471 271 111 25 chr17 53832453 53832732 -41439919 - L1MA4 LINE L1 -274 6023 5722 9 995 1448 111 18 0 chr17 53832729 53832946 -41439705 - L1_Mur2 LINE L1 -1991 3886 3666 9 995 588 65 0 0 chr17 53833215 53833292 -41439359 + (TC)n Simple_repeat Simple_repeat 2 78 0 9 995 631 206 37 30 chr17 53833292 53833417 -41439234 - B1_Mur1 SINE Alu -10 139 11 9 995 273 265 90 8 chr17 53833448 53833666 -41438985 - L1MEc LINE L1 -4672 1743 1421 9 995 216 211 115 0 chr17 53833839 53833891 -41438760 - RSINE1 SINE B4 -25 140 83 9 995 491 246 45 18 chr17 53834021 53834133 -41438518 - PB1D7 SINE Alu 0 120 6 9 995 564 201 274 19 chr17 53834254 53834411 -41438240 - B3A SINE B2 0 198 2 9 995 346 271 317 12 chr17 53834885 53835046 -41437605 + ID_B1 SINE B4 4 213 -11 9 995 204 40 0 0 chr17 53835046 53835071 -41437580 + (CAAAC)n Simple_repeat Simple_repeat 2 26 0 9 995 298 217 16 16 chr17 53835362 53835423 -41437228 + 4.5SRNA scRNA scRNA 30 90 -4 9 995 355 187 52 26 chr17 53835373 53835450 -41437201 + PB1D9 SINE Alu 42 120 0 9 995 9624 70 14 52 chr17 53835475 53836848 -41435803 - MMETn-int LTR ERVK -3522 1322 2 9 995 1897 104 46 67 chr17 53836849 53837178 -41435473 - RLTRETN_Mm LTR ERVK 0 322 1 9 995 296 152 162 29 chr17 53837290 53837358 -41435293 - PB1D9 SINE Alu -13 107 31 9 995 537 248 130 7 chr17 53837397 53837543 -41435108 - RSINE1 SINE B4 0 165 2 9 995 21 36 0 0 chr17 53838024 53838052 -41434599 + AT_rich Low_complexity Low_complexity 1 28 0 9 995 487 307 99 7 chr17 53838100 53838241 -41434410 - RSINE1 SINE B4 -10 155 2 9 995 247 311 10 82 chr17 53838320 53838418 -41434233 - B3 SINE B2 -124 92 2 9 995 207 0 0 0 chr17 53838428 53838451 -41434200 + (TTG)n Simple_repeat Simple_repeat 2 24 0 9 995 738 295 17 6 chr17 53838463 53838637 -41434014 + B3A SINE B2 1 176 -22 9 995 21 36 0 0 chr17 53838733 53838761 -41433890 + AT_rich Low_complexity Low_complexity 1 28 0 9 995 198 91 0 0 chr17 53838773 53838806 -41433845 + (T)n Simple_repeat Simple_repeat 1 33 0 9 995 1078 110 6 6 chr17 53840706 53840880 -41431771 + (TCTCC)n Simple_repeat Simple_repeat 3 176 0 9 995 699 99 0 0 chr17 53840880 53840980 -41431671 + (TTTC)n Simple_repeat Simple_repeat 4 104 0 9 995 1166 59 0 0 chr17 53840981 53841116 -41431535 - B1_Mus1 SINE Alu -13 135 1 9 995 442 299 65 37 chr17 53842611 53842826 -41429825 - ORR1D2 LTR MaLR -140 230 10 9 995 234 341 57 0 chr17 53842854 53842942 -41429709 + ORR1D2 LTR MaLR 35 127 -243 9 995 2297 100 18 59 chr17 53843455 53843796 -41428855 + ORR1A2 LTR MaLR 1 327 0 9 995 938 112 54 36 chr17 53843805 53843971 -41428680 + B2_Mm2 SINE B2 1 169 -26 9 995 316 219 0 0 chr17 53844103 53844167 -41428484 - L1_Mur2 LINE L1 -315 5562 5499 9 995 3029 226 23 7 chr17 53844157 53844853 -41427798 + Lx5 LINE L1 4975 5681 -196 9 995 1126 63 0 0 chr17 53844855 53844997 -41427654 + B1_Mus1 SINE Alu 1 142 -6 9 995 321 36 36 18 chr17 53845000 53845056 -41427595 + (CAAAA)n Simple_repeat Simple_repeat 4 60 0 9 995 2888 247 36 19 chr17 53845064 53845829 -41426822 + Lx5 LINE L1 5696 6702 -994 9 995 365 214 54 75 chr17 53845827 53845979 -41426672 + Lx5 LINE L1 7283 7413 -47 9 995 5515 54 5 0 chr17 53846018 53846667 -41425984 - L1Md_F2 LINE L1 -2 6580 5929 9 995 8329 63 7 1 chr17 53846668 53847724 -41424927 - L1_Mm LINE L1 -431 5452 4391 9 995 299 303 13 0 chr17 53847808 53847884 -41424767 + ID_B1 SINE B4 88 164 -60 9 995 489 229 171 11 chr17 53847889 53848070 -41424581 - MTD LTR MaLR 0 419 210 9 995 2076 138 6 12 chr17 53848077 53848415 -41424236 + MERVL_2A-int LTR ERVL 3631 3966 -1519 9 995 3392 144 85 13 chr17 53848414 53849028 -41423623 + MERVL_2A-int LTR ERVL 4979 5636 -125 9 995 254 145 17 52 chr17 53849042 53849100 -41423551 + ORR1D2-int LTR MaLR 585 640 -1323 9 995 273 53 0 0 chr17 53849100 53849138 -41423513 + MERVL-int LTR ERVL 5448 5485 0 9 995 3511 132 46 5 chr17 53849138 53849702 -41422949 + MT2B LTR ERVL 1 587 -14 9 995 519 82 0 0 chr17 53849703 53849776 -41422875 + (CA)n Simple_repeat Simple_repeat 2 74 0 9 995 274 219 79 40 chr17 53849792 53849868 -41422783 - MTD LTR MaLR -247 172 94 9 995 207 0 0 0 chr17 53850416 53850439 -41422212 + (TG)n Simple_repeat Simple_repeat 2 24 0 9 995 2533 78 3 64 chr17 53850533 53850877 -41421774 + ORR1A2 LTR MaLR 5 327 0 9 995 4456 156 126 42 chr17 53850877 53851087 -41421564 + ORR1A2-int LTR MaLR 1 209 -1754 9 995 1259 109 11 11 chr17 53851087 53851263 -41421388 - B2_Mm2 SINE B2 -18 177 2 9 995 4456 156 126 42 chr17 53851263 53852099 -41420552 + ORR1A2-int LTR MaLR 210 1135 -828 9 995 399 89 0 0 chr17 53852558 53852614 -41420037 + (GA)n Simple_repeat Simple_repeat 1 56 0 9 995 383 52 17 0 chr17 53852870 53852928 -41419723 + (TC)n Simple_repeat Simple_repeat 2 60 0 9 995 210 37 0 0 chr17 53852929 53852956 -41419695 + (TG)n Simple_repeat Simple_repeat 1 27 0 9 995 432 0 0 0 chr17 53853842 53853890 -41418761 + (TC)n Simple_repeat Simple_repeat 1 48 0 9 995 221 211 0 19 chr17 53855938 53855991 -41416660 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 9 995 9827 137 49 11 chr17 53856073 53858160 -41414491 - L1VL4 LINE L1 -1023 2536 363 9 995 500 250 46 26 chr17 53860361 53860513 -41412138 - Lx6 LINE L1 -25 7435 7281 9 995 878 183 7 0 chr17 53860610 53860752 -41411899 - B1_Mus1 SINE Alu -5 143 1 9 995 3033 149 69 6 chr17 53860830 53861355 -41411296 - Lx4A LINE L1 -1 7057 6500 9 995 275 208 27 40 chr17 53861404 53861554 -41411097 + (TTATA)n Simple_repeat Simple_repeat 5 152 0 9 995 645 176 0 81 chr17 53861723 53861859 -41410792 - Lx4B LINE L1 -243 6815 6691 9 995 406 352 48 26 chr17 53862250 53862559 -41410092 - L1M2 LINE L1 -2401 3742 3427 9 995 180 0 0 0 chr17 53864399 53864419 -41408232 + (CTG)n Simple_repeat Simple_repeat 1 20 0 9 995 191 316 0 0 chr17 53867368 53867425 -41405226 - MIRm SINE MIR -120 156 100 9 995 598 231 7 7 chr17 53868671 53868806 -41403845 - Lx5 LINE L1 -1 7049 6915 9 995 1956 242 27 77 chr17 53868813 53869453 -41403198 - Lx6 LINE L1 -1116 6344 5737 9 995 4722 159 18 21 chr17 53869454 53869484 -41403167 - Lx2 LINE L1 -1 6996 6970 9 995 1304 106 21 11 chr17 53869484 53869674 -41402977 - B2_Mm2 SINE B2 -1 194 3 9 995 4722 159 18 21 chr17 53869674 53870439 -41402212 - Lx2 LINE L1 -28 6969 6204 9 996 609 323 35 38 chr17 53870975 53871236 -41401415 + RMER15-int LTR ERVL 850 1109 -3890 9 996 209 184 0 0 chr17 53871413 53871451 -41401200 + (TG)n Simple_repeat Simple_repeat 2 39 0 9 996 1358 235 60 62 chr17 53871478 53871846 -41400805 + ORR1B2 LTR MaLR 1 367 0 9 996 351 380 66 22 chr17 53872120 53872346 -41400305 + B4A SINE B4 28 263 -29 9 996 292 190 0 0 chr17 53873124 53873182 -41399469 + BGLII LTR ERVK 1 58 -363 9 996 342 132 0 0 chr17 53873177 53873230 -41399421 + BGLII LTR ERVK 369 421 0 9 996 1471 210 23 43 chr17 53873380 53873773 -41398878 + L1_Mur3 LINE L1 5055 5439 -441 9 996 6920 68 76 2 chr17 53874423 53875373 -41397278 - L1_Mm LINE L1 -1766 4117 3098 9 996 195 42 0 0 chr17 53875373 53875397 -41397254 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9 996 6758 40 9 19 chr17 53875400 53876209 -41396442 - L1Md_F3 LINE L1 -1 6583 5783 9 996 35152 69 19 5 chr17 53876209 53882251 -41390400 - L1Md_F2 LINE L1 -13 6569 217 9 996 1685 66 0 5 chr17 53882252 53882465 -41390186 - L1Md_F2 LINE L1 -8 6574 6363 9 996 483 298 58 39 chr17 53883006 53883212 -41389439 - ORR1D2 LTR MaLR -150 220 11 9 996 234 344 0 0 chr17 53883414 53883510 -41389141 + MTEa LTR MaLR 284 379 0 9 996 2119 115 42 60 chr17 53883845 53884177 -41388474 + ORR1A2 LTR MaLR 1 326 -1 9 996 905 144 11 46 chr17 53884187 53884362 -41388289 + B2_Mm2 SINE B2 1 169 -26 9 996 339 179 0 0 chr17 53884495 53884551 -41388100 - L1_Mur2 LINE L1 -315 5562 5507 9 996 3248 244 21 6 chr17 53884547 53885355 -41387296 + L1_Mur2 LINE L1 4973 5792 -85 9 996 2135 128 116 22 chr17 53886613 53887006 -41385645 + MERVL_2A-int LTR ERVL 5170 5600 -161 9 996 4670 16 2 0 chr17 53887006 53887498 -41385153 + MT2_Mm LTR ERVL 1 493 0 9 996 48653 18 0 0 chr17 53887498 53892857 -41379794 + MERVL-int LTR ERVL 1 5360 -125 9 996 362 167 46 35 chr17 53892857 53892944 -41379707 + ORR1A3-int LTR MaLR 553 640 -1323 9 996 321 0 0 0 chr17 53892944 53892982 -41379669 + MERVL-int LTR ERVL 5448 5485 0 9 996 4462 16 2 0 chr17 53892982 53893474 -41379177 + MT2_Mm LTR ERVL 1 493 0 9 996 230 192 12 88 chr17 53893505 53893585 -41379066 + ORR1A2-int LTR MaLR 567 640 -1323 1 996 346 210 186 0 chr17 53893591 53893623 -41379028 + ORR1A2-int LTR MaLR 559 613 -1350 1 996 3305 123 47 19 chr17 53893623 53894195 -41378456 + MT2B LTR ERVL 1 588 -13 1 996 189 147 0 0 chr17 53894196 53894230 -41378421 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 996 441 0 0 0 chr17 53894955 53895004 -41377647 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 996 2026 92 12 61 chr17 53895004 53895330 -41377321 + ORR1A2 LTR MaLR 18 327 0 1 996 4279 163 110 31 chr17 53895330 53895540 -41377111 + ORR1A2-int LTR MaLR 1 209 -1754 1 996 1219 103 11 11 chr17 53895540 53895716 -41376935 - B2_Mm2 SINE B2 -18 177 2 1 996 4279 163 110 31 chr17 53895716 53895755 -41376896 + ORR1A2-int LTR MaLR 210 241 -1722 1 996 252 0 0 0 chr17 53895755 53895783 -41376868 + (TTG)n Simple_repeat Simple_repeat 3 30 0 1 996 4279 163 110 31 chr17 53895783 53896584 -41376067 + ORR1A2-int LTR MaLR 242 1134 -829 1 996 413 90 15 0 chr17 53897043 53897110 -41375541 + (GA)n Simple_repeat Simple_repeat 1 68 0 1 996 324 169 0 0 chr17 53897371 53897448 -41375203 + CT-rich Low_complexity Low_complexity 1 77 0 1 996 285 89 0 0 chr17 53897448 53897493 -41375158 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 996 513 0 0 0 chr17 53898022 53898079 -41374572 + (TC)n Simple_repeat Simple_repeat 1 57 0 1 996 312 216 68 0 chr17 53901009 53901083 -41371568 + PB1D9 SINE Alu 7 85 -35 1 996 24600 132 6 10 chr17 53901106 53902719 -41369932 - L1_Mus4 LINE L1 -6 6630 5017 1 996 5272 45 23 0 chr17 53902719 53903364 -41369287 - L1Md_F3 LINE L1 0 6584 5925 1 996 24600 169 12 20 chr17 53903364 53907743 -41364908 - L1_Mus4 LINE L1 -867 5016 682 1 996 213 200 18 18 chr17 53909288 53909344 -41363307 + (TTTA)n Simple_repeat Simple_repeat 4 59 0 1 996 4808 139 16 15 chr17 53909425 53910278 -41362373 - MusHAL1 LINE L1 -1023 1689 836 1 996 481 270 47 7 chr17 53911203 53911352 -41361299 - Lx6 LINE L1 -25 7435 7281 1 996 936 141 7 0 chr17 53911448 53911590 -41361061 - B1_Mus1 SINE Alu -5 143 1 1 996 2838 157 65 8 chr17 53911668 53912195 -41360456 - Lx4A LINE L1 -2 7056 6500 1 996 245 224 16 49 chr17 53912244 53912366 -41360285 + (TTATA)n Simple_repeat Simple_repeat 5 122 0 1 996 687 160 0 81 chr17 53912558 53912694 -41359957 - Lx4B LINE L1 -243 6815 6691 1 996 446 327 94 26 chr17 53913087 53913426 -41359225 - L1M2 LINE L1 -2412 3731 3370 1 996 186 43 0 0 chr17 53915250 53915273 -41357378 + (CTG)n Simple_repeat Simple_repeat 1 23 0 1 996 740 235 8 0 chr17 53915593 53915725 -41356926 + ETnERV2-int LTR ERVK 7070 7202 -204 1 996 400 279 8 16 chr17 53918244 53918368 -41354283 - B1_Mur2 SINE Alu 0 149 27 1 996 453 141 0 0 chr17 53920492 53920577 -41352074 + (GA)n Simple_repeat Simple_repeat 1 85 0 1 996 548 296 85 107 chr17 53921408 53921726 -41350925 - MER2 DNA MER2_type -26 319 9 1 996 451 254 8 8 chr17 53922995 53923122 -41349529 - Lx5 LINE L1 0 7050 6924 1 996 1855 254 46 77 chr17 53923136 53923777 -41348874 - Lx6 LINE L1 -1116 6344 5723 1 996 4306 167 18 20 chr17 53923777 53923800 -41348851 - Lx2 LINE L1 -7 6990 6970 1 996 1368 84 16 16 chr17 53923800 53923993 -41348658 - B2_Mm2 SINE B2 0 195 3 1 996 4306 167 18 20 chr17 53923993 53924758 -41347893 - Lx2 LINE L1 -28 6969 6204 1 996 1855 254 46 77 chr17 53924758 53924795 -41347856 - Lx6 LINE L1 -1738 5722 5687 1 996 497 291 46 50 chr17 53925313 53925573 -41347078 + RMER15-int LTR ERVL 850 1108 -3891 1 996 261 0 0 0 chr17 53925739 53925768 -41346883 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 996 1115 223 132 21 chr17 53925807 53926133 -41346518 + ORR1B2 LTR MaLR 1 362 -5 1 996 525 16 0 0 chr17 53926133 53926195 -41346456 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 996 283 336 93 42 chr17 53926464 53926700 -41345951 + B4A SINE B4 45 292 0 1 996 555 29 0 0 chr17 53926747 53926816 -41345835 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 996 339 138 0 0 chr17 53927510 53927568 -41345083 + BGLII LTR ERVK 1 58 -363 1 996 362 94 0 0 chr17 53927563 53927616 -41345035 + BGLII LTR ERVK 369 421 0 1 996 1289 199 12 124 chr17 53927773 53928185 -41344466 + L1_Mur3 LINE L1 5074 5439 -441 1 996 1283 259 39 15 chr17 53928809 53929185 -41343466 + Lx6 LINE L1 6897 7537 -159 1 996 1145 51 13 0 chr17 53929255 53929412 -41343239 - B2_Mm2 SINE B2 -36 159 1 1 996 583 239 6 54 chr17 53929418 53929586 -41343065 + Lx6 LINE L1 7537 7696 0 1 996 1266 75 0 6 chr17 53929658 53929832 -41342819 - L1Md_T LINE L1 0 6582 6410 1 996 254 232 44 44 chr17 53929971 53930061 -41342590 - L1MD LINE L1 -914 5232 5143 1 996 298 297 0 0 chr17 53930269 53930380 -41342271 + (TG)n Simple_repeat Simple_repeat 2 112 0 1 996 2770 22 6 50 chr17 53930965 53931307 -41341344 - IAPLTR2b LTR ERVK 0 327 1 1 996 260 352 28 0 chr17 53931318 53931426 -41341225 + B1F SINE Alu 28 138 -11 1 996 972 328 90 15 chr17 53932187 53932785 -41339866 + L1MB3 LINE L1 5531 6173 -10 1 996 278 305 42 8 chr17 53933119 53933238 -41339413 - RLTR22_Mur LTR ERVK -136 1712 1590 1 996 827 239 76 50 chr17 53933335 53933350 -41339301 + Lx9 LINE L1 6843 6857 -787 1 996 2596 207 26 35 chr17 53933350 53933930 -41338721 - RMER15 LTR ERVL 0 575 1 1 996 827 239 76 50 chr17 53933930 53934074 -41338577 + Lx9 LINE L1 6858 7009 -635 1 996 198 0 0 0 chr17 53934074 53934096 -41338555 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1 996 827 239 76 50 chr17 53934096 53934212 -41338439 + Lx9 LINE L1 7010 7126 -518 1 996 506 277 66 5 chr17 53934214 53934410 -41338241 + Lx9 LINE L1 7229 7436 -208 1 996 235 287 57 11 chr17 53934414 53934502 -41338149 - RMER12 LTR ERVK -486 836 745 1 996 207 0 0 0 chr17 53934897 53934920 -41337731 + (A)n Simple_repeat Simple_repeat 1 23 0 1 996 3815 41 32 6 chr17 53935260 53935730 -41336921 - L1Md_F2 LINE L1 0 6582 6101 1 996 487 51 0 0 chr17 53935731 53935790 -41336861 + L1Md_F2 LINE L1 6073 6131 -451 1 996 287 287 83 21 chr17 53936051 53936147 -41336504 - PB1D10 SINE Alu -3 114 13 1 996 232 300 0 28 chr17 53937046 53937118 -41335533 - ID4_ SINE ID 0 83 14 1 996 27 0 0 0 chr17 53937551 53937578 -41335073 + AT_rich Low_complexity Low_complexity 1 27 0 1 996 1081 84 0 0 chr17 53937628 53937782 -41334869 + B2_Mm2 SINE B2 1 154 -41 1 996 4107 80 50 3 chr17 53937784 53938361 -41334290 + Lx3_Mus LINE L1 6391 6994 -15 1 996 468 0 0 0 chr17 53938363 53938415 -41334236 + (TAAA)n Simple_repeat Simple_repeat 2 53 0 1 996 479 270 113 44 chr17 53938538 53938813 -41333838 - MLT1B LTR MaLR -69 321 28 1 996 354 240 82 8 chr17 53938885 53939007 -41333644 + Lx5 LINE L1 6917 7047 -3 1 996 321 328 0 5 chr17 53939314 53939424 -41333227 + B1F2 SINE Alu 1 107 -13 1 996 240 336 57 98 chr17 53939515 53939637 -41333014 - RMER20B LTR ERVK -38 589 473 1 996 513 279 105 12 chr17 53939656 53939903 -41332748 - RMER20B LTR ERVK -228 399 130 1 996 279 239 122 45 chr17 53940149 53940321 -41332330 - MLT1D LTR MaLR -143 484 337 1 996 429 310 23 0 chr17 53940667 53940796 -41331855 + B1F SINE Alu 1 132 -17 1 996 696 296 141 19 chr17 53941441 53942125 -41330526 + L1MB4 LINE L1 5378 6175 -5 1 996 387 0 0 0 chr17 53942852 53942895 -41329756 + (TCC)n Simple_repeat Simple_repeat 1 43 0 1 996 332 216 186 0 chr17 53942926 53943023 -41329628 - B1_Mus1 SINE Alu -1 147 33 1 996 330 156 0 0 chr17 53943272 53943336 -41329315 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 996 36093 64 29 6 chr17 53943372 53948702 -41323949 + L1Md_F3 LINE L1 243 5589 -297 1 996 8317 48 11 5 chr17 53948702 53949680 -41322971 + L1Md_F3 LINE L1 5590 6573 -14 1 996 1502 96 9 22 chr17 53950441 53950664 -41321987 - L1_Mus3 LINE L1 0 6638 6419 1 996 15688 137 8 7 chr17 53950664 53953434 -41319217 - L1_Mus3 LINE L1 -566 6072 3302 1 996 2535 54 7 0 chr17 53953437 53953733 -41318918 - L1Md_F3 LINE L1 0 6584 6287 1 996 5120 127 16 5 chr17 53953745 53954557 -41318094 - L1_Mur2 LINE L1 -1244 4633 3813 1 996 553 178 0 63 chr17 53954565 53954691 -41317960 - L1_Mur2 LINE L1 -890 4987 4870 1 996 450 149 85 0 chr17 53954688 53954782 -41317869 - L1_Mur2 LINE L1 -2061 3816 3715 1 996 1114 191 29 5 chr17 53954782 53954992 -41317659 - ORR1B1 LTR MaLR -6 388 174 1 996 2121 103 3 68 chr17 53954986 53955341 -41317310 - IAPLTR1a_Mm LTR ERVK -5 332 1 1 996 59332 11 1 3 chr17 53955341 53961830 -41310821 - IAPEz-int LTR ERVK 0 6481 9 1 996 2290 105 3 67 chr17 53961830 53962188 -41310463 - IAPLTR1a_Mm LTR ERVK -2 335 1 1 996 504 145 228 24 chr17 53962196 53962323 -41310328 - ORR1B1 LTR MaLR -216 178 26 1 996 698 43 11 0 chr17 53962453 53962547 -41310104 + (GA)n Simple_repeat Simple_repeat 1 95 0 1 996 366 61 0 0 chr17 53962970 53963019 -41309632 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 996 360 0 0 0 chr17 53963158 53963198 -41309453 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 996 1747 223 56 3 chr17 53963680 53964057 -41308594 - RMER10B LTR ERVL 0 398 2 1 996 2108 123 25 81 chr17 53964091 53964525 -41308126 - RMER17C LTR ERVK 0 410 1 1 996 21228 112 31 4 chr17 53964596 53968618 -41304033 + L1Md_F LINE L1 215 4351 -1532 1 996 189 147 0 0 chr17 53969094 53969128 -41303523 + (ATTG)n Simple_repeat Simple_repeat 2 35 0 1 996 356 311 52 16 chr17 53969662 53969855 -41302796 + L1ME2 LINE L1 5775 5974 -190 1 996 4542 72 4 2 chr17 53971537 53972095 -41300556 + L1_Mus3 LINE L1 6073 6631 -7 1 996 252 143 0 0 chr17 53972096 53972138 -41300513 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 996 569 296 76 46 chr17 53973851 53974113 -41298538 + RLTR42-int LTR ERVK 1156 1425 -4097 1 996 907 262 15 10 chr17 53975076 53975280 -41297371 - B3 SINE B2 -9 207 3 1 996 745 114 175 0 chr17 53975345 53975459 -41297192 + B1_Mus2 SINE Alu 1 134 -13 1 996 1333 51 6 6 chr17 53975470 53975649 -41297002 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 1 996 216 0 0 0 chr17 53976559 53976583 -41296068 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 996 593 188 7 0 chr17 53977066 53977210 -41295441 + (TG)n Simple_repeat Simple_repeat 2 146 0 1 996 632 199 49 2 chr17 53977444 53977583 -41295068 + B1_Mur2 SINE Alu 3 147 -2 1 996 1128 291 114 19 chr17 53978368 53978957 -41293694 - L1MB3 LINE L1 -8 6175 5531 1 996 225 264 103 0 chr17 53978988 53979075 -41293576 - L1M4 LINE L1 -734 5444 5349 1 996 29 28 0 0 chr17 53979217 53979253 -41293398 + AT_rich Low_complexity Low_complexity 1 36 0 1 996 294 370 0 0 chr17 53979646 53979746 -41292905 - PB1D10 SINE Alu -17 100 1 1 996 222 254 127 0 chr17 53980433 53980504 -41292147 + PB1D9 SINE Alu 32 111 -9 1 996 338 268 166 109 chr17 53980601 53980903 -41291748 + RMER20B LTR ERVK 90 408 -219 1 996 309 162 0 0 chr17 53980906 53980974 -41291677 + CT-rich Low_complexity Low_complexity 2 69 0 1 996 634 284 80 42 chr17 53981160 53981447 -41291204 + MLT1B LTR MaLR 1 298 -92 1 996 236 376 44 22 chr17 53981828 53981964 -41290687 + Tigger5 DNA MER2_type 40 178 -2228 1 996 380 101 17 92 chr17 53982296 53982416 -41290235 + CT-rich Low_complexity Low_complexity 4 114 0 1 996 614 79 0 11 chr17 53982406 53982496 -41290155 + (TTCC)n Simple_repeat Simple_repeat 4 92 0 1 996 2701 118 18 5 chr17 53982519 53982902 -41289749 - Lx3_Mus LINE L1 0 7009 6622 1 996 1903 115 5 5 chr17 53982902 53983208 -41289443 + Lx3_Mus LINE L1 5683 6021 -279 1 996 324 0 0 0 chr17 53983214 53983250 -41289401 + (GAAA)n Simple_repeat Simple_repeat 3 38 0 1 996 4154 111 38 14 chr17 53983250 53983907 -41288744 + Lx3_Mus LINE L1 5908 6580 -429 1 996 296 295 13 0 chr17 53983915 53983993 -41288658 - PB1D7 SINE Alu 0 120 42 1 996 4352 120 5 21 chr17 53984413 53985044 -41287607 + Lx LINE L1 6032 6652 -2 1 996 213 39 0 0 chr17 53985572 53985598 -41287053 + (A)n Simple_repeat Simple_repeat 1 26 0 1 996 218 32 32 0 chr17 53986152 53986183 -41286468 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1 996 803 270 48 52 chr17 53986874 53987383 -41285268 + L1_Mur3 LINE L1 2435 3110 -2770 1 996 995 92 0 28 chr17 53987383 53987528 -41285123 + L1_Mus1 LINE L1 6427 6567 0 1 996 299 288 27 69 chr17 53987528 53987651 -41285000 + L1_Mur3 LINE L1 3111 3229 -2651 1 996 4953 76 14 2 chr17 53987641 53988287 -41284364 + L1_Mus1 LINE L1 5731 6388 -179 1 996 20396 24 0 0 chr17 53988294 53990623 -41282028 + L1Md_T LINE L1 3258 5586 -297 1 996 8881 35 2 0 chr17 53990623 53991617 -41281034 + L1Md_T LINE L1 5587 6582 0 1 996 423 0 0 0 chr17 53991642 53991689 -41280962 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 1 996 1381 101 5 0 chr17 53991689 53991877 -41280774 + L1_Mus1 LINE L1 6378 6566 -1 1 996 590 289 116 10 chr17 53991949 53992260 -41280391 + L1_Mur3 LINE L1 3237 3580 -2300 1 996 437 259 7 43 chr17 53992253 53992394 -41280257 + Lx8 LINE L1 7000 7135 -338 1 996 1484 56 41 0 chr17 53992582 53992838 -41279813 + L1Md_F3 LINE L1 6382 6584 0 1 996 22 0 0 0 chr17 53994395 53994417 -41278234 + AT_rich Low_complexity Low_complexity 1 22 0 1 996 11172 159 8 133 chr17 53994686 53995830 -41276821 + L1_Mm LINE L1 2293 3351 -2532 1 996 811 89 41 7 chr17 53995830 53995977 -41276674 + RMER17B LTR ERVK 309 460 -498 1 996 11172 159 8 133 chr17 53995977 53997330 -41275321 + L1_Mm LINE L1 3352 4605 -1278 1 996 1972 46 4 0 chr17 53997327 53997565 -41275086 + L1Md_F2 LINE L1 5348 5586 -297 1 996 8563 53 1 0 chr17 53997565 53998589 -41274062 + L1Md_F2 LINE L1 5587 6582 0 1 996 1158 165 5 10 chr17 53998589 53998797 -41273854 + RLTR12B LTR ERVK 322 528 0 1 996 2650 234 63 49 chr17 53998797 53999463 -41273188 - L1_Mur3 LINE L1 -3112 2768 2089 1 996 951 129 0 0 chr17 53999463 53999641 -41273010 + (TG)n Simple_repeat Simple_repeat 2 179 0 1 996 2650 234 63 49 chr17 53999641 53999687 -41272964 - L1_Mur3 LINE L1 -3792 2088 2060 1 996 570 103 0 0 chr17 53999687 53999774 -41272877 + (TG)n Simple_repeat Simple_repeat 1 87 0 1 996 585 0 0 0 chr17 53999774 53999838 -41272813 + (GA)n Simple_repeat Simple_repeat 1 65 0 1 996 2650 234 63 49 chr17 53999838 54000000 -41272651 - L1_Mur3 LINE L1 -3821 2059 1881 1 996 302 198 123 0 chr17 54000000 54000081 -41272570 - L1_Mur3 LINE L1 -4001 1879 1789 1 996 1257 222 55 31 chr17 54000086 54000471 -41272180 + L1_Mur3 LINE L1 2984 3377 -2503 2 996 1337 229 72 16 chr17 54000485 54000875 -41271776 + RMER12 LTR ERVK 1 432 -1416 3 996 533 161 143 42 chr17 54000875 54001043 -41271608 + L1_Mur3 LINE L1 4472 4656 -1221 2 996 281 89 0 22 chr17 54001046 54001092 -41271559 + (TAA)n Simple_repeat Simple_repeat 1 45 0 4 996 1559 240 30 61 chr17 54001112 54001574 -41271077 + Lx9 LINE L1 7103 7550 -94 5 124 512 185 80 37 chr17 54001637 54001800 -41270851 + Lx9 LINE L1 7475 7644 0 6 997 2412 269 69 20 chr17 54001806 54002722 -41269929 + L1_Mur3 LINE L1 4667 5627 -253 2 997 1167 260 71 28 chr17 54002725 54002912 -41269739 + Lx7 LINE L1 6546 6746 -950 7 997 1892 122 55 146 chr17 54002912 54003363 -41269288 + RMER17C LTR ERVK 1 410 0 8 997 1167 292 214 30 chr17 54003363 54003752 -41268899 + Lx7 LINE L1 6747 7201 -495 7 997 645 14 0 0 chr17 54003760 54003834 -41268817 + (GA)n Simple_repeat Simple_repeat 1 74 0 9 997 734 193 423 17 chr17 54003837 54004135 -41268516 - RMER10A LTR ERVL -22 420 1 1 997 430 281 97 28 chr17 54004286 54004502 -41268149 - L1MB8 LINE L1 -71 6107 5877 1 997 1248 237 34 53 chr17 54004552 54004873 -41267778 + MTC LTR MaLR 1 315 -106 1 997 180 0 0 0 chr17 54005463 54005483 -41267168 + (T)n Simple_repeat Simple_repeat 1 20 0 1 997 539 265 70 103 chr17 54006446 54006875 -41265776 - Lx9 LINE L1 -1 7643 7229 1 997 1736 292 103 66 chr17 54006877 54007157 -41265494 - Lx9 LINE L1 -518 7126 6858 1 997 2793 197 29 36 chr17 54007157 54007736 -41264915 + RMER15 LTR ERVL 1 575 0 1 997 4746 258 58 78 chr17 54007736 54010359 -41262292 - Lx9 LINE L1 -787 6857 4100 1 997 2212 134 16 6 chr17 54010510 54010833 -41261818 - ORR1A3 LTR MaLR 0 326 1 1 997 582 221 228 44 chr17 54010916 54011096 -41261555 + B3 SINE B2 4 216 0 1 997 1209 70 0 0 chr17 54011823 54011966 -41260685 + B1_Mm SINE Alu 5 147 0 1 997 8379 76 4 1 chr17 54012007 54013430 -41259221 - L1_Mus1 LINE L1 -416 6151 4723 1 997 357 43 0 0 chr17 54014582 54014629 -41258022 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 997 1333 261 51 51 chr17 54015775 54016021 -41256630 + RodERV21-int LTR ERV1 692 926 -4065 2 997 445 119 365 76 chr17 54016021 54016166 -41256485 - B2_Mm2 SINE B2 -7 188 2 2 997 1184 131 11 22 chr17 54016166 54016346 -41256305 - B2_Mm1t SINE B2 -14 179 2 2 997 1333 261 51 51 chr17 54016346 54016547 -41256104 + RodERV21-int LTR ERV1 927 1139 -3852 2 997 1707 273 68 85 chr17 54016652 54016791 -41255860 + RodERV21-int LTR ERV1 2119 2252 -2739 2 997 2252 231 49 54 chr17 54016791 54017405 -41255246 + RMER19C LTR ERVK 1 611 0 2 997 1707 273 68 85 chr17 54017405 54017866 -41254785 + RodERV21-int LTR ERV1 2253 2709 -2282 2 997 491 0 17 0 chr17 54017894 54017953 -41254698 + (TC)n Simple_repeat Simple_repeat 1 60 0 2 997 2319 204 116 77 chr17 54018045 54018821 -41253830 - RLTR13D6 LTR ERVK -96 806 1 2 997 1825 88 4 0 chr17 54018841 54019092 -41253559 + MusHAL1 LINE L1 494 745 -1967 2 997 255 351 44 0 chr17 54019683 54019797 -41252854 - B1F SINE Alu -11 138 20 2 997 241 305 102 44 chr17 54019797 54019820 -41252831 - ID_B1 SINE B4 -11 213 69 2 997 1857 124 80 0 chr17 54020743 54021042 -41251609 - IAPEY2_LTR LTR ERVK 0 357 35 3 997 54970 92 15 4 chr17 54021053 54028466 -41244185 - IAPEY3-int LTR ERVK -4 7676 180 3 997 1345 90 117 14 chr17 54028466 54028680 -41243971 - IAPEY3_LTR LTR ERVK -96 236 1 3 997 1483 283 25 116 chr17 54028898 54029071 -41243580 - Lx6 LINE L1 -8 7452 7294 3 997 1346 89 39 11 chr17 54029071 54029253 -41243398 + B2_Mm2 SINE B2 1 187 -8 3 997 1483 283 25 116 chr17 54029253 54029691 -41242960 - Lx6 LINE L1 -167 7293 6897 3 997 1462 217 8 33 chr17 54030322 54030684 -41241967 - L1_Mur3 LINE L1 -441 5439 5087 3 997 3323 37 0 0 chr17 54030703 54031079 -41241572 - L1Md_T LINE L1 0 6582 6207 3 997 349 132 0 0 chr17 54031244 54031297 -41241354 - BGLII LTR ERVK 0 421 369 3 997 374 375 59 35 chr17 54032104 54032358 -41240293 - B4A SINE B4 -6 286 27 3 997 1504 201 68 59 chr17 54032617 54032956 -41239695 - ORR1B1 LTR MaLR 0 394 53 3 997 180 152 0 0 chr17 54033014 54033047 -41239604 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 997 549 346 26 26 chr17 54033234 54033507 -41239144 - RMER15-int LTR ERVL -3891 1108 836 4 997 4111 182 33 4 chr17 54034053 54034711 -41237940 + Lx2 LINE L1 6204 6869 -128 4 997 660 26 0 0 chr17 54034711 54034789 -41237862 + (TG)n Simple_repeat Simple_repeat 2 79 0 4 997 4111 182 33 4 chr17 54034789 54034879 -41237772 + Lx2 LINE L1 6870 6972 -25 4 997 1419 95 16 5 chr17 54034879 54035069 -41237582 + B2_Mm2 SINE B2 3 194 -1 4 997 4634 62 3 3 chr17 54035069 54035666 -41236985 - L1_Mm LINE L1 -1649 4234 3638 4 997 2385 147 164 12 chr17 54035662 54035989 -41236662 + Lx6 LINE L1 5258 5586 -297 4 997 8728 47 0 1 chr17 54035989 54036986 -41235665 + L1Md_F2 LINE L1 5587 6582 0 4 997 4915 93 1 8 chr17 54036995 54037653 -41234998 + L1Md_F2 LINE L1 5928 6581 -1 4 997 2385 237 63 60 chr17 54037653 54038351 -41234300 + Lx6 LINE L1 5611 6344 -1116 4 997 355 279 23 8 chr17 54038370 54038500 -41234151 + Lx5 LINE L1 6915 7046 -4 4 997 196 267 0 0 chr17 54039741 54039798 -41232853 + MIR SINE MIR 93 156 -120 5 997 314 253 45 88 chr17 54040381 54040615 -41232036 + RMER17D LTR ERVK 152 389 -500 5 997 3046 9 0 0 chr17 54041633 54041955 -41230696 + RLTRETN_Mm LTR ERVK 1 322 0 5 997 41516 25 13 8 chr17 54041955 54046774 -41225877 + MMETn-int LTR ERVK 1 4844 0 5 997 3046 9 0 0 chr17 54046774 54047096 -41225555 + RLTRETN_Mm LTR ERVK 1 322 0 5 997 411 293 0 41 chr17 54048156 54048277 -41224374 + B1_Mur2 SINE Alu 27 142 -7 5 997 612 0 0 0 chr17 54050412 54050480 -41222171 + (CAG)n Simple_repeat Simple_repeat 1 68 0 5 997 389 350 72 53 chr17 54051977 54052656 -41219995 + L1M2 LINE L1 3040 3731 -2412 5 997 559 171 7 89 chr17 54053063 54053198 -41219453 + Lx4B LINE L1 6692 6815 -243 5 997 3053 159 63 4 chr17 54053562 54054087 -41218564 + Lx4A LINE L1 6502 7057 -1 5 997 873 168 35 0 chr17 54054165 54054308 -41218343 + B1_Mus1 SINE Alu 1 148 0 5 997 440 291 26 7 chr17 54054402 54054554 -41218097 + Lx6 LINE L1 7281 7435 -25 5 997 283 305 20 31 chr17 54055494 54055592 -41217059 - MTEa LTR MaLR -14 365 269 6 997 7810 226 84 126 chr17 54056772 54060924 -41211727 + L1_Mus4 LINE L1 718 4964 -919 6 997 7146 58 3 0 chr17 54060924 54061770 -41210881 + L1Md_F2 LINE L1 5732 6580 -2 6 997 7810 176 55 82 chr17 54061770 54063503 -41209148 + L1_Mus4 LINE L1 4965 6362 -274 6 997 244 270 38 57 chr17 54063898 54064004 -41208647 - B1F2 SINE Alu 0 149 46 6 997 612 0 0 0 chr17 54066131 54066199 -41206452 + (GA)n Simple_repeat Simple_repeat 1 68 0 6 997 531 0 0 0 chr17 54066561 54066620 -41206031 + (GA)n Simple_repeat Simple_repeat 1 59 0 6 997 2962 199 41 103 chr17 54066899 54067571 -41205080 - ORR1A2-int LTR MaLR -921 871 241 6 997 318 26 0 0 chr17 54067571 54067610 -41205041 + (CAA)n Simple_repeat Simple_repeat 1 39 0 6 997 2962 199 41 103 chr17 54067610 54067651 -41205000 - ORR1A2-int LTR MaLR -1552 240 210 6 997 1229 111 11 11 chr17 54067651 54067825 -41204826 + B2_Mm2 SINE B2 4 177 -18 6 997 2962 199 41 103 chr17 54067825 54068039 -41204612 - ORR1A2-int LTR MaLR -1583 209 2 6 997 2391 91 12 65 chr17 54068039 54068380 -41204271 - ORR1A2 LTR MaLR 0 327 5 6 997 216 171 0 0 chr17 54068466 54068507 -41204144 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 997 274 253 122 33 chr17 54069055 54069145 -41203506 + MTD LTR MaLR 94 191 -228 7 997 214 171 0 0 chr17 54069146 54069181 -41203470 + (TG)n Simple_repeat Simple_repeat 1 35 0 7 997 38861 30 0 1 chr17 54069202 54076043 -41196608 - L1Md_T LINE L1 0 6585 1 7 997 1536 152 32 4 chr17 54076044 54076322 -41196329 - MT2B2 LTR ERVL -25 559 274 7 997 10213 32 1 19 chr17 54076326 54078324 -41194327 + L1Md_A LINE L1 452 2407 -3476 7 997 1531 151 8 0 chr17 54078324 54078563 -41194088 - MERVL-int LTR ERVL -542 5219 4979 7 997 1835 150 8 78 chr17 54078562 54078923 -41193728 - MERVL-int LTR ERVL -1519 3966 3631 7 997 481 215 183 17 chr17 54078930 54079110 -41193541 + MTD LTR MaLR 210 419 0 7 997 303 267 27 0 chr17 54079115 54079190 -41193461 - ID_B1 SINE B4 -60 164 88 7 997 405 208 54 75 chr17 54079306 54079458 -41193193 - Lx6 LINE L1 -47 7413 7283 7 997 1646 266 104 59 chr17 54079456 54080096 -41192555 - Lx5 LINE L1 -994 6702 5780 7 997 956 219 18 0 chr17 54081494 54081713 -41190938 - Lx5 LINE L1 -682 5195 4973 7 997 336 157 0 0 chr17 54081709 54081760 -41190891 + Lx6 LINE L1 5507 5557 -320 7 997 917 166 34 22 chr17 54081890 54082069 -41190582 - B2_Mm2 SINE B2 -14 181 1 8 997 2353 93 18 59 chr17 54082078 54082419 -41190232 - ORR1A2 LTR MaLR 0 327 1 8 997 234 341 57 0 chr17 54082930 54083018 -41189633 - ORR1D2 LTR MaLR -243 127 35 8 997 478 321 56 32 chr17 54083046 54083262 -41189389 + ORR1D2 LTR MaLR 10 230 -140 8 997 1062 236 49 26 chr17 54083723 54083988 -41188663 + Lx6 LINE L1 6074 6344 -1116 7 997 623 222 7 7 chr17 54083994 54084130 -41188521 + Lx5 LINE L1 6915 7050 0 8 997 474 140 10 20 chr17 54086129 54086231 -41186420 + C-rich Low_complexity Low_complexity 2 102 0 8 997 231 114 0 0 chr17 54087104 54087139 -41185512 + (CAG)n Simple_repeat Simple_repeat 1 35 0 8 997 247 317 90 14 chr17 54089284 54089495 -41183156 + L1M4 LINE L1 3500 3726 -2420 8 997 664 160 0 81 chr17 54089897 54090033 -41182618 + Lx4B LINE L1 6691 6815 -243 8 997 220 184 16 73 chr17 54090204 54090327 -41182324 + (TATAA)n Simple_repeat Simple_repeat 2 117 0 8 997 2702 157 92 6 chr17 54090378 54090843 -41181808 + Lx4A LINE L1 6502 7010 -48 9 997 216 0 0 0 chr17 54090843 54090867 -41181784 + (TG)n Simple_repeat Simple_repeat 1 24 0 9 997 2702 157 92 6 chr17 54090867 54090913 -41181738 + Lx4A LINE L1 7011 7057 -1 9 997 859 199 14 0 chr17 54090991 54091132 -41181519 + B1_Mus1 SINE Alu 1 143 -5 9 997 479 285 26 7 chr17 54091228 54091380 -41181271 + Lx6 LINE L1 7281 7435 -25 9 997 21 0 0 0 chr17 54091422 54091443 -41181208 + AT_rich Low_complexity Low_complexity 1 21 0 9 997 225 0 0 0 chr17 54094360 54094385 -41178266 + (T)n Simple_repeat Simple_repeat 1 25 0 9 997 296 292 28 72 chr17 54094495 54094676 -41177975 - L1M4 LINE L1 -816 5330 5158 9 997 1548 209 130 59 chr17 54094709 54095212 -41177439 - RLTR31_Mur LTR ERVK -10 543 1 9 997 747 243 99 74 chr17 54095219 54095624 -41177027 - Lx9 LINE L1 -15 7629 7215 9 997 986 83 0 0 chr17 54095664 54095796 -41176855 - L1_Mus1 LINE L1 0 6567 6436 9 997 7582 58 9 32 chr17 54095796 54096786 -41175865 - L1Md_F2 LINE L1 -7 6575 5605 1 997 907 281 47 47 chr17 54096779 54097097 -41175554 - Lx9 LINE L1 -474 7170 6853 9 997 275 314 210 28 chr17 54097255 54097507 -41175144 + Lx9 LINE L1 7090 7387 -257 1 997 3766 242 69 48 chr17 54097511 54098907 -41173744 - L1_Rod LINE L1 -324 5523 4099 1 997 3561 125 17 28 chr17 54099113 54099695 -41172956 - L1_Mur1 LINE L1 -1057 4829 4254 1 997 418 254 96 15 chr17 54099780 54099916 -41172735 + ERVL-B4-int LTR ERVL 13 159 -5555 1 997 567 0 0 0 chr17 54100103 54100166 -41172485 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 997 616 302 87 30 chr17 54100172 54100441 -41172210 + ERVL-B4-int LTR ERVL 434 711 -4956 1 997 583 274 124 30 chr17 54100460 54100629 -41172022 - Lx9 LINE L1 -1042 6602 6418 9 997 225 0 0 0 chr17 54100634 54100659 -41171992 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1 997 228 35 0 0 chr17 54103042 54103071 -41169580 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1 997 21 36 0 0 chr17 54103463 54103491 -41169160 + AT_rich Low_complexity Low_complexity 1 28 0 1 997 246 323 31 0 chr17 54103760 54103856 -41168795 + LTR33 LTR ERVL 389 487 -28 1 997 257 360 23 31 chr17 54104228 54104357 -41168294 + MER94 DNA AcHobo 6 133 -1 1 997 686 250 265 10 chr17 54104391 54104682 -41167969 - MLT1A0 LTR MaLR 0 365 1 1 997 351 0 0 0 chr17 54105637 54105676 -41166975 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 997 256 326 61 0 chr17 54106225 54106323 -41166328 - MLT1D LTR MaLR -399 106 3 1 997 1115 178 16 13 chr17 54106844 54107130 -41165521 + ORR1B1 LTR MaLR 5 329 0 1 997 4262 54 14 0 chr17 54107955 54108452 -41164199 - L1_Mus1 LINE L1 -2 6565 6062 1 997 4633 57 0 0 chr17 54110291 54111071 -41161580 - L1Md_F2 LINE L1 -440 6142 5363 1 997 180 0 54 54 chr17 54111178 54111215 -41161436 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 1 997 233 57 0 28 chr17 54112264 54112300 -41160351 + (GGAGA)n Simple_repeat Simple_repeat 2 36 0 1 997 221 135 19 0 chr17 54113509 54113561 -41159090 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 1 997 346 219 47 47 chr17 54114710 54114796 -41157855 + PB1D7 SINE Alu 9 94 -26 1 997 487 208 8 53 chr17 54115552 54115684 -41156967 + Lx5 LINE L1 6922 7047 -3 1 997 506 294 0 7 chr17 54115945 54116092 -41156559 + L1MC2 LINE L1 5815 5960 -384 1 997 296 269 183 0 chr17 54116228 54116321 -41156330 + ID_B1 SINE B4 80 189 -35 1 997 233 160 80 0 chr17 54116329 54116398 -41156253 + (CAGAGA)n Simple_repeat Simple_repeat 1 74 0 1 997 369 290 33 22 chr17 54116408 54116592 -41156059 + MLT1D LTR MaLR 404 624 0 1 997 354 45 0 0 chr17 54116666 54116710 -41155941 + (TTA)n Simple_repeat Simple_repeat 2 45 0 1 997 723 91 0 52 chr17 54116710 54116826 -41155825 - B1_Mus1 SINE Alu -3 145 36 1 997 1254 95 0 0 chr17 54117543 54117722 -41154929 + (TC)n Simple_repeat Simple_repeat 1 179 0 1 997 322 242 212 0 chr17 54117808 54117907 -41154744 - B1_Mur2 SINE Alu -20 129 10 1 997 27 49 0 0 chr17 54117919 54117960 -41154691 + AT_rich Low_complexity Low_complexity 1 41 0 1 997 726 178 147 0 chr17 54118581 54118738 -41153913 - URR1A DNA MER1_type 0 226 47 1 997 2492 235 35 70 chr17 54118813 54120924 -41151727 + L1_Mur3 LINE L1 42 1994 -3886 1 997 3674 118 43 0 chr17 54120937 54121470 -41151181 + L1VL4 LINE L1 213 768 -5534 1 997 1010 92 6 38 chr17 54121470 54121629 -41151022 + B2_Mm1t SINE B2 2 155 -38 1 997 2862 28 6 177 chr17 54121722 54122192 -41150459 + RLTR10 LTR ERVK 1 390 0 1 997 16640 21 3 50 chr17 54122202 54124242 -41148409 + RLTR10-int LTR ERVK 41 1984 -3 1 997 2747 44 6 177 chr17 54124244 54124714 -41147937 + RLTR10 LTR ERVK 1 390 0 1 997 1406 264 77 21 chr17 54124720 54125188 -41147463 + RLTR17 LTR ERVK 125 618 -74 1 997 908 238 133 16 chr17 54125225 54125533 -41147118 + Lx9 LINE L1 7300 7643 -1 1 997 739 250 28 24 chr17 54125542 54125796 -41146855 + L1_Mur3 LINE L1 2738 2992 -2888 1 997 701 113 0 0 chr17 54125908 54126014 -41146637 - B2_Mm2 SINE B2 -88 107 2 1 997 624 186 89 0 chr17 54126100 54126224 -41146427 + B1_Mur1 SINE Alu 15 149 0 1 997 536 201 71 24 chr17 54126239 54126407 -41146244 + L1_Mur3 LINE L1 3079 3254 -2626 1 997 391 229 127 0 chr17 54127380 54127498 -41145153 - B3 SINE B2 -6 210 78 1 997 458 195 28 105 chr17 54127629 54127772 -41144879 + Lx9 LINE L1 7345 7476 -168 1 997 234 0 0 0 chr17 54127772 54127798 -41144853 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 997 229 260 86 9 chr17 54127970 54128075 -41144576 - L1MEd LINE L1 -5973 146 34 1 997 934 282 108 16 chr17 54130517 54130895 -41141756 + RMER5 LTR ERV1 33 445 -89 1 997 1004 68 0 0 chr17 54130893 54131026 -41141625 + B1_Mus1 SINE Alu 14 146 -2 1 997 332 250 0 52 chr17 54131037 54131134 -41141517 + RMER5 LTR ERV1 431 522 -12 1 997 1654 198 117 28 chr17 54131365 54131816 -41140835 + RMER16 LTR ERVK 1 532 -1 1 997 2006 142 18 12 chr17 54132007 54132334 -41140317 - ORR1A4 LTR MaLR 0 329 1 1 998 3180 146 154 9 chr17 54133184 54133822 -41138829 + RMER19A LTR ERVK 6 735 -2 1 998 1920 80 78 27 chr17 54134457 54134752 -41137899 - L1_Mus3 LINE L1 0 6638 6329 1 998 297 330 9 26 chr17 54136044 54136144 -41136507 + MLT1B LTR MaLR 30 127 -263 1 998 857 136 26 7 chr17 54136144 54136299 -41136352 - URR1B DNA MER1_type 0 225 68 1 998 297 348 46 1 chr17 54136379 54136528 -41136123 + MLT1B LTR MaLR 233 467 0 1 998 485 290 0 0 chr17 54137177 54137315 -41135336 - RMER1B Other Other -864 202 65 1 998 365 189 11 0 chr17 54137592 54137682 -41134969 + (TATG)n Simple_repeat Simple_repeat 1 91 0 1 998 546 277 15 8 chr17 54137691 54137822 -41134829 - RSINE1 SINE B4 -17 148 17 1 998 1755 269 39 14 chr17 54137836 54138897 -41133754 - RMER1A Other Other -300 766 18 1 998 551 276 198 8 chr17 54138915 54139270 -41133381 - RMER1B Other Other -616 450 16 1 998 1160 95 49 32 chr17 54139672 54139857 -41132794 + B2_Mm2 SINE B2 1 188 -7 1 998 839 228 242 35 chr17 54140153 54140471 -41132180 - ORR1C2 LTR MaLR 0 384 1 1 998 450 0 0 0 chr17 54141514 54141564 -41131087 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 998 275 295 57 0 chr17 54143021 54143126 -41129525 + MIR3 SINE MIR 70 180 -28 1 998 281 26 26 0 chr17 54144083 54144121 -41128530 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 998 812 274 32 11 chr17 54144141 54144421 -41128230 - MTD LTR MaLR -124 295 10 1 998 8597 60 21 9 chr17 54145152 54146793 -41125858 - L1Md_T LINE L1 -4 6996 5253 1 998 707 82 0 0 chr17 54146793 54146890 -41125761 + L1Md_A LINE L1 483 579 -6145 1 998 1522 190 42 14 chr17 54146923 54147276 -41125375 + L1_Mur3 LINE L1 4954 5316 -564 1 998 1301 174 35 99 chr17 54147278 54147590 -41125061 - RMER1C Other Other 0 1342 1051 1 998 180 0 0 0 chr17 54147610 54147630 -41125021 + (TC)n Simple_repeat Simple_repeat 1 20 0 1 998 1155 76 6 11 chr17 54147637 54147811 -41124840 + (TTTC)n Simple_repeat Simple_repeat 2 174 0 1 998 4220 63 17 0 chr17 54147814 54148341 -41124310 - L1_Mus2 LINE L1 -8 6558 6023 1 998 606 221 28 35 chr17 54148344 54148528 -41124123 + SRV_MM-int LTR ERVK 2851 3011 -3156 1 998 6641 190 25 13 chr17 54148531 54149661 -41122990 + ETnERV2-int LTR ERVK 4931 6078 -1328 1 998 3782 66 85 41 chr17 54149661 54150201 -41122450 - LTRIS2 LTR ERV1 0 564 1 1 998 6641 190 25 13 chr17 54150201 54150330 -41122321 + ETnERV2-int LTR ERVK 6079 6205 -1201 1 998 439 198 39 114 chr17 54150676 54150882 -41121769 + RLTR9A LTR ERVK 110 364 -73 1 998 258 220 0 0 chr17 54150932 54150991 -41121660 + (CATA)n Simple_repeat Simple_repeat 4 62 0 1 998 730 264 120 91 chr17 54150994 54151146 -41121505 + RMER12 LTR ERVK 761 950 -372 1 998 420 111 0 0 chr17 54151146 54151209 -41121442 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 998 730 264 120 91 chr17 54151209 54151246 -41121405 + RMER12 LTR ERVK 951 972 -350 1 998 183 80 0 0 chr17 54151246 54151271 -41121380 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 998 730 264 120 91 chr17 54151271 54151521 -41121130 + RMER12 LTR ERVK 973 1213 -109 1 998 294 213 0 0 chr17 54151590 54151684 -41120967 + (TG)n Simple_repeat Simple_repeat 1 94 0 1 998 285 250 14 0 chr17 54151724 54151796 -41120855 - RSINE1 SINE B4 -36 129 57 1 998 639 290 256 18 chr17 54152133 54152473 -41120178 - RMER20B LTR ERVK -38 589 169 1 998 1143 212 5 9 chr17 54152677 54152901 -41119750 - MERVK26-int LTR ERVK -2 6917 6695 1 998 1034 248 183 11 chr17 54152910 54153277 -41119374 + BGLII_B LTR ERVK 9 438 -3 1 998 503 266 49 0 chr17 54153822 54153965 -41118686 + MYSERV-int LTR ERVK 4248 4397 -2153 1 998 7490 162 23 17 chr17 54153963 54154419 -41118232 - MurERV4-int LTR ERVK -273 4987 4531 1 998 239 0 32 0 chr17 54154419 54154450 -41118201 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 1 998 7490 162 23 17 chr17 54154450 54155342 -41117309 - MurERV4-int LTR ERVK -730 4530 3632 1 998 489 236 24 8 chr17 54155351 54155475 -41117176 + L1_Mur2 LINE L1 959 1084 -6002 1 998 1101 129 148 5 chr17 54155475 54155677 -41116974 - RMER19C LTR ERVK -380 231 1 1 998 2162 174 117 4 chr17 54155678 54156226 -41116425 + L1_Mur2 LINE L1 1229 1838 -4039 1 998 1732 229 30 63 chr17 54156242 54156880 -41115771 - RLTR1D LTR ERV1 -13 611 22 1 998 2640 214 18 63 chr17 54156884 54157597 -41115054 + L1_Mur2 LINE L1 1845 2525 -3352 1 998 985 307 55 16 chr17 54157595 54157903 -41114748 + Lx5 LINE L1 6731 7050 0 1 998 317 257 29 0 chr17 54158199 54158304 -41114347 + L1MC LINE L1 4820 4927 -1219 1 998 291 28 0 0 chr17 54159039 54159075 -41113576 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 998 856 58 17 0 chr17 54160308 54160428 -41112223 - B1_Mm SINE Alu 0 147 26 1 998 647 154 0 16 chr17 54161278 54161403 -41111248 + B2_Mm2 SINE B2 69 191 -4 1 998 1287 228 40 24 chr17 54161754 54162051 -41110600 + RLTR21 LTR ERVK 1 302 -1270 1 998 555 283 63 37 chr17 54162603 54162871 -41109780 + RLTR16 LTR ERVK 24 298 -207 1 998 351 0 0 0 chr17 54164476 54164515 -41108136 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 998 7388 149 28 1 chr17 54165277 54167046 -41105605 - Lx2 LINE L1 -640 6357 4533 1 998 337 136 0 0 chr17 54167046 54167112 -41105539 + Lx LINE L1 6587 6652 -2 1 998 2945 91 0 10 chr17 54167427 54167827 -41104824 + MTA_Mm LTR MaLR 1 396 0 1 998 450 0 0 0 chr17 54167966 54168016 -41104635 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 998 1104 0 22 0 chr17 54168367 54168503 -41104148 + (TCTA)n Simple_repeat Simple_repeat 3 141 0 2 998 314 297 33 33 chr17 54169178 54169300 -41103351 + RMER13A LTR ERVK 652 773 -87 2 998 490 241 74 11 chr17 54169439 54169615 -41103036 + RMER15-int LTR ERVL 906 1092 -3907 2 998 816 200 0 0 chr17 54169865 54170035 -41102616 + (CATATA)n Simple_repeat Simple_repeat 2 171 0 2 998 2562 252 85 88 chr17 54170208 54171008 -41101643 + RMER13A LTR ERVK 1 798 -62 2 998 1287 14 0 0 chr17 54171010 54171157 -41101494 + B1_Mm SINE Alu 1 147 0 2 998 234 0 0 0 chr17 54171157 54171183 -41101468 + (A)n Simple_repeat Simple_repeat 1 26 0 2 998 455 319 159 26 chr17 54171418 54171650 -41101001 + B4A SINE B4 7 269 -23 2 998 252 0 0 0 chr17 54172678 54172706 -41099945 + (TTTTTG)n Simple_repeat Simple_repeat 6 33 0 2 998 966 116 0 7 chr17 54172706 54172845 -41099806 - B1_Mus1 SINE Alu 0 148 11 2 998 547 292 16 59 chr17 54172707 54172912 -41099739 - ID_B1 SINE B4 0 224 39 2 998 4022 120 26 14 chr17 54173343 54174551 -41098100 + L1VL4 LINE L1 187 1411 -2148 2 998 11983 160 41 23 chr17 54174546 54177539 -41095112 + Lx LINE L1 3333 6389 -265 2 998 735 115 8 32 chr17 54177540 54177666 -41094985 - MusHAL1 LINE L1 -1711 1001 879 2 998 1124 152 23 14 chr17 54177701 54177921 -41094730 + Lx LINE L1 6429 6650 -4 2 998 492 161 26 0 chr17 54177939 54178061 -41094590 + L1_Mm LINE L1 1704 1835 -4048 2 998 4748 166 37 5 chr17 54178060 54179044 -41093607 + L1_Mur1 LINE L1 2971 3985 -1901 2 998 314 200 31 0 chr17 54179038 54179103 -41093548 + Lx2B LINE L1 6294 6360 -640 2 998 2297 228 43 93 chr17 54179105 54179965 -41092686 - RMER17B LTR ERVK -4 904 3 2 998 4298 131 3 0 chr17 54179965 54180608 -41092043 + Lx2 LINE L1 6353 6997 0 2 998 391 317 61 43 chr17 54181226 54181457 -41091194 - RMER15 LTR ERVL -46 529 295 2 998 521 198 8 0 chr17 54181462 54181588 -41091063 + CT-rich Low_complexity Low_complexity 2 128 0 2 998 214 339 61 52 chr17 54181719 54181739 -41090912 - B3 SINE B2 -100 116 1 2 998 309 347 0 0 chr17 54181739 54181834 -41090817 - B4A SINE B4 -197 95 1 2 998 874 273 8 0 chr17 54182952 54183190 -41089461 + Lx6 LINE L1 7045 7284 -176 2 998 36423 45 0 3 chr17 54183204 54189797 -41082854 - L1Md_T LINE L1 0 6585 1 2 998 533 268 44 16 chr17 54189801 54189983 -41082668 + Lx6 LINE L1 7261 7447 -13 2 998 37 76 0 0 chr17 54190029 54190108 -41082543 + AT_rich Low_complexity Low_complexity 1 79 0 2 998 28 29 0 0 chr17 54190624 54190659 -41081992 + AT_rich Low_complexity Low_complexity 1 35 0 2 998 528 326 7 21 chr17 54191199 54191340 -41081311 - RSINE1 SINE B4 -26 139 1 2 998 379 218 27 18 chr17 54191378 54191490 -41081161 + Lx4B LINE L1 6916 7028 -30 2 998 304 197 13 0 chr17 54191498 54191574 -41081077 + Lx9 LINE L1 7567 7643 -1 2 998 263 263 108 6 chr17 54191821 54191978 -41080673 + L1MC LINE L1 3579 3751 -2395 2 998 244 333 104 22 chr17 54191986 54192121 -41080530 + B1F2 SINE Alu 3 148 -1 2 998 615 171 60 0 chr17 54192509 54192626 -41080025 + Lx4A LINE L1 6924 7047 -11 2 998 306 73 0 0 chr17 54192626 54192667 -41079984 + (TAA)n Simple_repeat Simple_repeat 3 43 0 2 998 465 19 0 0 chr17 54194270 54194324 -41078327 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 998 215 278 0 0 chr17 54196518 54196572 -41076079 + (TGG)n Simple_repeat Simple_repeat 3 56 0 2 998 387 0 0 0 chr17 54196618 54196661 -41075990 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 2 998 257 284 0 22 chr17 54196926 54197016 -41075635 + (CA)n Simple_repeat Simple_repeat 1 88 0 2 998 483 48 0 0 chr17 54197261 54197323 -41075328 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 998 306 0 0 0 chr17 54197607 54197641 -41075010 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 998 251 290 29 20 chr17 54197963 54198065 -41074586 - Lx9 LINE L1 -1714 5930 5828 2 998 934 292 85 0 chr17 54198176 54198457 -41074194 + MTD LTR MaLR 115 419 0 2 998 373 273 212 0 chr17 54199084 54199183 -41073468 + RSINE1 SINE B4 10 129 -36 2 998 834 271 101 3 chr17 54199189 54199614 -41073037 + L1M2 LINE L1 5296 5759 -541 2 998 816 11 0 0 chr17 54199627 54199720 -41072931 + (CA)n Simple_repeat Simple_repeat 2 94 0 2 998 1922 209 34 10 chr17 54199785 54200196 -41072455 - MTC LTR MaLR 0 421 1 2 998 346 276 35 93 chr17 54200685 54200857 -41071794 - LTR41 LTR ERVL -518 250 89 2 998 1014 335 42 45 chr17 54201130 54201814 -41070837 - Lx8 LINE L1 -215 7258 6577 2 998 981 340 8 8 chr17 54201877 54202256 -41070395 - Lx8 LINE L1 -893 6580 6202 2 998 882 237 60 35 chr17 54202273 54202575 -41070076 - L1M2 LINE L1 -484 5816 5508 2 998 431 343 0 0 chr17 54202583 54202717 -41069934 - B3A SINE B2 -60 138 5 2 998 1156 285 74 13 chr17 54202800 54203397 -41069254 - L1M2 LINE L1 -897 5246 4614 2 998 1021 322 56 48 chr17 54203421 54204051 -41068600 - Lx8 LINE L1 -5 7468 6834 2 998 724 275 20 14 chr17 54204051 54204239 -41068412 - B3 SINE B2 -12 183 2 2 998 22 35 0 0 chr17 54204375 54204404 -41068247 + AT_rich Low_complexity Low_complexity 1 29 0 2 998 910 230 73 5 chr17 54204407 54204599 -41068052 + B3 SINE B2 6 210 -6 2 998 1206 288 79 48 chr17 54205990 54206573 -41066078 - Lx8 LINE L1 -49 7424 6824 2 998 285 235 86 0 chr17 54206574 54206655 -41065996 - L1M2 LINE L1 -488 5692 5605 2 998 367 212 0 33 chr17 54206669 54206724 -41065927 + polypyrimidine Low_complexity Low_complexity 70 121 0 2 998 594 0 0 0 chr17 54206724 54206790 -41065861 + (TTCTC)n Simple_repeat Simple_repeat 1 66 0 2 998 367 212 0 33 chr17 54206790 54206856 -41065795 + polypyrimidine Low_complexity Low_complexity 4 69 0 2 998 942 167 0 0 chr17 54206827 54207007 -41065644 + CT-rich Low_complexity Low_complexity 1 180 0 2 998 505 292 31 5 chr17 54207034 54207230 -41065421 - L1M2 LINE L1 -711 5586 5386 2 998 1212 54 0 0 chr17 54207241 54207388 -41065263 - B1_Mus2 SINE Alu 0 147 1 2 998 21 0 0 0 chr17 54207893 54207914 -41064737 + AT_rich Low_complexity Low_complexity 1 21 0 2 998 251 85 21 0 chr17 54208033 54208080 -41064571 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 2 998 315 302 97 41 chr17 54209438 54209583 -41063068 - RMER15 LTR ERVL -16 559 407 2 998 436 272 24 16 chr17 54209864 54210046 -41062605 + Lx9 LINE L1 6922 7236 -408 2 998 207 0 0 0 chr17 54210247 54210270 -41062381 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 998 1061 108 6 0 chr17 54210869 54211045 -41061606 + (TCTA)n Simple_repeat Simple_repeat 2 178 0 2 998 320 251 96 48 chr17 54211218 54211427 -41061224 - Lx9 LINE L1 -19 7625 7407 2 998 214 302 44 44 chr17 54211522 54211582 -41061069 + MIRb SINE MIR 139 201 -67 2 998 312 27 0 0 chr17 54211582 54211619 -41061032 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 998 214 302 44 44 chr17 54211619 54211648 -41061003 + MIRb SINE MIR 202 228 -40 2 998 4443 127 28 11 chr17 54212103 54212819 -41059832 - Lx2 LINE L1 -13 6984 6257 2 998 1760 170 25 19 chr17 54212867 54213190 -41059461 + ORR1A4 LTR MaLR 1 325 -4 2 998 269 238 0 16 chr17 54213359 54213423 -41059228 - L1_Rod LINE L1 -211 5636 5574 2 998 488 207 0 41 chr17 54213873 54213994 -41058657 - L1_Rod LINE L1 -269 5578 5463 2 998 276 206 0 29 chr17 54213998 54214068 -41058583 - L1_Mur3 LINE L1 -541 5339 5272 2 998 27 62 0 0 chr17 54214068 54214116 -41058535 + AT_rich Low_complexity Low_complexity 1 48 0 2 998 950 311 64 32 chr17 54214194 54214663 -41057988 + Lx9 LINE L1 6249 6732 -912 2 998 359 321 27 54 chr17 54215089 54215313 -41057338 - HERV16-int LTR ERVL -2718 2278 2061 2 998 353 280 11 21 chr17 54216724 54216819 -41055832 - RLTR20B2 LTR ERVK 0 560 467 2 998 387 0 0 0 chr17 54216819 54216862 -41055789 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 998 1267 46 0 9 chr17 54216862 54217080 -41055571 + (GA)n Simple_repeat Simple_repeat 1 215 0 2 998 437 78 47 37 chr17 54217224 54217331 -41055320 + CT-rich Low_complexity Low_complexity 2 109 0 2 998 1452 159 36 4 chr17 54217332 54217585 -41055066 - RLTR20B2 LTR ERVK -299 261 1 2 998 240 35 0 0 chr17 54218292 54218321 -41054330 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 2 998 319 240 127 67 chr17 54218321 54218475 -41054176 - B2_Mm2 SINE B2 -17 178 13 2 998 269 309 0 14 chr17 54218418 54218487 -41054164 - RSINE1 SINE B4 -96 69 2 2 998 1062 322 131 14 chr17 54218584 54219452 -41053199 + Lx8 LINE L1 6285 7260 -213 2 998 22 99 0 0 chr17 54219583 54219654 -41052997 + AT_rich Low_complexity Low_complexity 1 71 0 2 998 235 274 65 35 chr17 54220886 54221056 -41051595 - Charlie5 DNA MER1_type -13 2611 2437 2 998 234 0 0 0 chr17 54221729 54221755 -41050896 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 998 961 224 10 14 chr17 54221814 54222022 -41050629 - B3 SINE B2 -6 210 4 2 998 286 244 30 15 chr17 54222022 54222155 -41050496 + (TA)n Simple_repeat Simple_repeat 1 135 0 2 998 238 247 32 0 chr17 54222211 54222304 -41050347 + (TA)n Simple_repeat Simple_repeat 1 96 0 2 998 727 203 0 0 chr17 54222313 54222431 -41050220 + B3 SINE B2 2 119 -97 2 998 615 254 7 7 chr17 54222437 54222572 -41050079 - B1_Mur1 SINE Alu -13 136 2 2 998 951 119 2 1 chr17 54222946 54223090 -41049561 + B2_Mm2 SINE B2 23 169 -24 2 998 1026 112 11 6 chr17 54223090 54223269 -41049382 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2 998 808 191 32 6 chr17 54223269 54223282 -41049369 + B2_Mm1t SINE B2 170 183 -10 2 998 321 203 14 0 chr17 54224545 54224614 -41048037 - RMER15 LTR ERVL -109 466 397 2 998 506 330 137 13 chr17 54224614 54224927 -41047724 - Lx8 LINE L1 -218 7255 6904 2 998 555 291 124 7 chr17 54224925 54225223 -41047428 + L1_Rod LINE L1 5515 5847 0 2 998 5454 149 91 12 chr17 54225320 54226319 -41046332 - RLTR25A LTR ERVK -25 1078 1 2 998 1641 58 0 0 chr17 54226438 54226681 -41045970 + L1Md_T LINE L1 6375 6582 0 3 998 24 0 0 0 chr17 54226825 54226849 -41045802 + AT_rich Low_complexity Low_complexity 1 24 0 3 998 6272 127 214 3 chr17 54227595 54229365 -41043286 - Lx LINE L1 -62 6592 4329 3 998 17319 56 6 2 chr17 54229356 54232347 -41040304 - L1Md_F2 LINE L1 -2 6580 3578 3 998 228 67 0 0 chr17 54232347 54232377 -41040274 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 998 7721 51 1 0 chr17 54232379 54233890 -41038761 - L1Md_F3 LINE L1 -25 6559 5047 3 998 3520 63 4 0 chr17 54233889 54234379 -41038272 - L1Md_F3 LINE L1 -2292 3591 3100 3 998 19023 103 9 3 chr17 54234374 54238062 -41034589 + L1_Mus1 LINE L1 2854 6567 0 3 998 1316 305 38 60 chr17 54238099 54238966 -41033685 - Lx8 LINE L1 -950 6523 5677 2 998 1178 239 92 92 chr17 54238995 54239364 -41033287 - MT2A LTR ERVL -162 371 3 3 998 337 299 41 33 chr17 54239380 54239622 -41033029 - L1_Mur3 LINE L1 -3790 2090 1847 3 998 240 146 0 0 chr17 54239626 54239667 -41032984 + Lx4B LINE L1 6437 6477 -581 3 998 6312 35 0 0 chr17 54239667 54240411 -41032240 - L1Md_T LINE L1 -2 6580 5837 3 998 4529 20 0 0 chr17 54240411 54240954 -41031697 + L1Md_T LINE L1 5214 5756 -127 3 998 1494 224 16 5 chr17 54240950 54241379 -41031272 + Lx4B LINE L1 6465 6993 -65 3 998 21 0 0 0 chr17 54241406 54241427 -41031224 + AT_rich Low_complexity Low_complexity 1 21 0 3 998 1043 217 73 23 chr17 54241462 54241756 -41030895 - Lx4B LINE L1 -5 7053 6753 3 998 1017 183 34 0 chr17 54241754 54241962 -41030689 - Lx4B LINE L1 -614 6444 6230 3 998 1042 265 22 101 chr17 54242006 54242648 -41030003 - L1_Mur3 LINE L1 -4074 1806 1216 3 998 267 334 48 2 chr17 54243684 54243773 -41028878 - B1F SINE Alu -57 90 1 3 998 180 0 0 0 chr17 54244864 54244884 -41027767 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 3 998 8290 31 0 0 chr17 54245032 54246085 -41026566 + L1_Mm LINE L1 3625 4677 -1206 3 998 2571 37 3 3 chr17 54246070 54246394 -41026257 + L1_Mm LINE L1 5474 5797 -86 3 998 8055 34 14 39 chr17 54246395 54247513 -41025138 + L1Md_A LINE L1 196 1286 -5438 3 998 2861 16 0 0 chr17 54247513 54247835 -41024816 - RLTRETN_Mm LTR ERVK 0 322 1 3 998 31584 19 5 7 chr17 54247835 54251707 -41020944 - MMETn-int LTR ERVK 0 4844 980 3 998 36745 9 0 1 chr17 54251712 54257922 -41014729 + L1Md_A LINE L1 1 5586 -297 3 998 9027 4 0 0 chr17 54257922 54258918 -41013733 + L1Md_A LINE L1 5587 6582 0 3 998 8216 20 1 1 chr17 54258918 54259911 -41012740 - MMETn-int LTR ERVK -3851 993 1 3 998 2872 12 0 0 chr17 54259911 54260233 -41012418 - RLTRETN_Mm LTR ERVK 0 322 1 3 124 35496 11 2 0 chr17 54260233 54264532 -41008119 + L1Md_A LINE L1 1281 5586 -297 3 999 8663 22 0 0 chr17 54264532 54265528 -41007123 + L1Md_A LINE L1 5587 6582 0 3 999 6541 48 0 0 chr17 54265523 54266323 -41006328 + L1Md_T LINE L1 5783 6582 0 3 999 8986 32 0 0 chr17 54266325 54267434 -41005217 + L1_Mm LINE L1 4670 5778 -105 3 999 2718 40 0 0 chr17 54267434 54267756 -41004895 + RLTRETN_Mm LTR ERVK 1 322 0 3 999 11720 37 2 3 chr17 54267756 54269235 -41003416 + MMETn-int LTR ERVK 1 1478 -3366 3 999 2863 25 0 0 chr17 54269235 54269596 -41003055 - L1_Mm LINE L1 -1427 4456 4096 3 999 3309 51 2 0 chr17 54269596 54270006 -41002645 + L1Md_T LINE L1 6171 6581 -1 3 999 17819 31 3 4 chr17 54270006 54272234 -41000417 + MMETn-int LTR ERVK 1468 3693 -1151 3 999 4711 45 3 18 chr17 54272237 54272863 -40999788 - IAPEz-int LTR ERVK -129 6352 5736 3 999 2041 83 0 0 chr17 54272862 54273140 -40999511 - IAPEz-int LTR ERVK -4845 1636 1359 3 999 3318 69 1 16 chr17 54273140 54273718 -40998933 - IAPEz-int LTR ERVK -5819 662 168 3 999 226 327 0 0 chr17 54273718 54273773 -40998878 - RLTR27 LTR ERVK -34 275 221 3 999 234 321 0 0 chr17 54273799 54273855 -40998796 - RLTR27 LTR ERVK -34 275 220 3 999 439 128 17 136 chr17 54273855 54273973 -40998678 - IAPEz-int LTR ERVK -6369 112 9 3 999 2249 107 98 87 chr17 54273974 54274444 -40998207 - IAPLTR2_Mm LTR ERVK 0 475 1 3 999 8544 47 2 14 chr17 54274444 54275558 -40997093 + MMETn-int LTR ERVK 3744 4844 0 3 999 2835 22 0 0 chr17 54275558 54275880 -40996771 + RLTRETN_Mm LTR ERVK 1 322 0 3 999 6299 63 2 2 chr17 54275880 54276690 -40995961 + L1Md_F2 LINE L1 5773 6582 0 3 999 204 40 0 0 chr17 54276734 54276759 -40995892 + (A)n Simple_repeat Simple_repeat 1 25 0 3 999 2225 157 30 20 chr17 54277906 54278309 -40994342 + MTB_Mm LTR MaLR 1 407 0 3 999 345 24 0 0 chr17 54278418 54278460 -40994191 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 999 459 308 80 94 chr17 54278893 54279094 -40993557 - B4 SINE B4 -10 282 85 3 999 916 290 48 52 chr17 54279170 54279665 -40992986 - L1_Rod LINE L1 -823 5024 4532 3 999 350 218 57 11 chr17 54279667 54279755 -40992896 - B4 SINE B4 -196 96 5 3 999 575 321 72 80 chr17 54279947 54280336 -40992315 + MLT2C1 LTR ERVL 12 397 0 3 999 408 363 115 49 chr17 54280588 54281014 -40991637 - MLT1F-int LTR MaLR -36 1453 1000 3 999 966 222 57 50 chr17 54281021 54281360 -40991291 - Lx2B LINE L1 -2 6979 6609 3 999 3571 187 18 10 chr17 54281363 54282077 -40990574 + Lx2B LINE L1 5880 6599 -401 3 999 440 209 7 49 chr17 54282082 54282219 -40990432 - RMER17A2 LTR ERVK -20 938 692 3 999 564 168 162 69 chr17 54282219 54282392 -40990259 + Lx LINE L1 6465 6653 -1 3 999 703 20 51 0 chr17 54282545 54282643 -40990008 + (TTTTC)n Simple_repeat Simple_repeat 3 105 0 3 999 1017 274 0 0 chr17 54282646 54282861 -40989790 + B3 SINE B2 2 216 0 3 999 2564 140 7 70 chr17 54283254 54283708 -40988943 - RLTR23 LTR ERV1 -4 426 2 3 999 203 138 0 0 chr17 54283898 54283927 -40988724 + (CCCCCT)n Simple_repeat Simple_repeat 5 33 0 3 999 270 0 0 0 chr17 54284334 54284364 -40988287 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 999 313 346 0 0 chr17 54284371 54284452 -40988199 - RSINE1 SINE B4 -14 151 71 3 999 582 250 24 20 chr17 54284393 54284597 -40988054 + MTC LTR MaLR 217 421 0 3 999 536 300 155 59 chr17 54285497 54285819 -40986832 - ORR1E LTR MaLR -4 355 3 3 999 408 254 24 108 chr17 54286236 54286254 -40986397 + CYRA11_Mm Unknown Y-chromosome 157 211 -406 3 999 808 141 20 26 chr17 54286254 54286407 -40986244 - URR1A DNA MER1_type 0 226 75 3 999 408 254 24 108 chr17 54286407 54286448 -40986203 + CYRA11_Mm Unknown Y-chromosome 212 350 -267 3 999 463 191 26 9 chr17 54286470 54286586 -40986065 + CT-rich Low_complexity Low_complexity 4 121 0 3 999 1189 85 0 11 chr17 54286590 54286768 -40985883 + (TCC)n Simple_repeat Simple_repeat 3 178 0 3 999 762 308 23 37 chr17 54286868 54287168 -40985483 - Lx6 LINE L1 -58 7402 7107 3 999 234 0 0 0 chr17 54287207 54287233 -40985418 + (A)n Simple_repeat Simple_repeat 1 26 0 3 999 456 19 0 0 chr17 54290180 54290233 -40982418 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 999 288 120 20 0 chr17 54290277 54290310 -40982341 + L1_Mm LINE L1 5554 5586 -297 3 999 8183 34 3 1 chr17 54290310 54291292 -40981359 + L1Md_F3 LINE L1 5587 6570 -14 3 999 288 120 20 0 chr17 54291292 54291308 -40981343 + L1_Mm LINE L1 5587 5602 -281 3 999 708 185 25 6 chr17 54291406 54291569 -40981082 - Lx LINE L1 -4 6650 6485 3 999 8849 88 21 17 chr17 54291569 54292971 -40979680 - MusHAL1 LINE L1 -1304 1408 1 3 999 246 32 0 0 chr17 54292971 54293002 -40979649 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 999 6208 132 18 5 chr17 54293002 54293834 -40978817 - L1VL4 LINE L1 -5455 847 2 3 999 738 280 23 32 chr17 54294424 54294645 -40978006 + MTC LTR MaLR 81 299 -122 3 999 1673 227 95 8 chr17 54294947 54295325 -40977326 - MTC LTR MaLR -8 413 3 3 999 248 289 0 35 chr17 54296882 54296968 -40975683 + (CATATA)n Simple_repeat Simple_repeat 4 86 0 3 999 570 276 28 7 chr17 54297413 54297555 -40975096 + B1_Mur2 SINE Alu 3 147 -2 3 999 406 342 33 104 chr17 54297555 54297625 -40975026 + B4 SINE B4 88 284 -8 3 999 342 304 76 29 chr17 54298758 54298863 -40973788 - PB1D10 SINE Alu 0 117 8 3 999 215 350 0 0 chr17 54298810 54298870 -40973781 - B4A SINE B4 -147 145 86 3 999 1443 245 52 0 chr17 54299776 54300123 -40972528 + Lx9 LINE L1 6514 6878 -766 3 999 360 64 0 0 chr17 54300135 54300182 -40972469 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 3 999 536 221 83 35 chr17 54300182 54300343 -40972308 - Lx5 LINE L1 -19 7031 6862 3 999 1235 296 102 25 chr17 54300328 54300862 -40971789 + Lx9 LINE L1 6796 7455 -189 3 999 320 94 19 0 chr17 54300862 54300915 -40971736 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 999 495 358 114 33 chr17 54300915 54301037 -40971614 + Lx9 LINE L1 7333 7457 -16 3 999 35 0 0 0 chr17 54301037 54301072 -40971579 + AT_rich Low_complexity Low_complexity 1 35 0 3 999 681 103 0 0 chr17 54301531 54301648 -40971003 + (GA)n Simple_repeat Simple_repeat 2 118 0 3 999 1035 88 0 58 chr17 54302427 54302583 -40970068 - B1_Mus1 SINE Alu 0 148 2 3 999 411 175 0 0 chr17 54302795 54302915 -40969736 + CT-rich Low_complexity Low_complexity 2 121 0 3 999 951 117 0 0 chr17 54302940 54303120 -40969531 + (TC)n Simple_repeat Simple_repeat 1 180 0 3 999 236 246 66 0 chr17 54303463 54303524 -40969127 + L1MD LINE L1 2173 2237 -3909 3 999 233 357 101 0 chr17 54303838 54303967 -40968684 + B1F1 SINE Alu 1 142 -7 3 999 699 268 179 62 chr17 54304352 54304643 -40968008 + MTB_Mm LTR MaLR 1 325 -82 3 999 231 94 0 0 chr17 54304643 54304675 -40967976 - MT2A LTR ERVL 0 533 502 3 999 300 186 0 0 chr17 54304697 54304756 -40967895 + (TG)n Simple_repeat Simple_repeat 1 59 0 3 999 1292 218 170 88 chr17 54304773 54305225 -40967426 - MT2A LTR ERVL -44 489 1 3 999 338 186 58 11 chr17 54305225 54305303 -40967348 + MTB_Mm LTR MaLR 285 366 -4 3 999 290 323 104 16 chr17 54305876 54306068 -40966583 + MIR SINE MIR 19 227 -35 3 999 554 219 31 0 chr17 54306343 54306471 -40966180 - RMER1C Other Other -2 1340 1209 3 999 180 233 32 32 chr17 54307547 54307609 -40965042 + L2 LINE L2 633 694 -2725 3 999 361 263 80 31 chr17 54308429 54308591 -40964060 + L1MA4 LINE L1 5776 5945 -352 3 999 1359 236 51 39 chr17 54308855 54309322 -40963329 + MT2A LTR ERVL 1 543 -41 3 999 316 0 45 0 chr17 54309323 54309367 -40963284 + (TAGA)n Simple_repeat Simple_repeat 2 47 0 3 999 450 0 0 0 chr17 54309367 54309416 -40963235 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 999 559 212 69 55 chr17 54309416 54309561 -40963090 + Lx8 LINE L1 6348 6494 -979 3 999 272 242 35 139 chr17 54310125 54310240 -40962411 - RMER1C Other Other -140 1202 1100 3 999 455 284 107 55 chr17 54310401 54310692 -40961959 - L1M2 LINE L1 -705 5595 5290 3 999 360 0 0 0 chr17 54310695 54310735 -40961916 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 999 653 182 86 21 chr17 54310776 54310916 -40961735 - B1_Mur4 SINE Alu 0 150 2 3 999 389 253 4 2 chr17 54310941 54311061 -40961590 - L1M2 LINE L1 -715 5171 5072 3 999 338 174 72 7 chr17 54311127 54311266 -40961385 + (TA)n Simple_repeat Simple_repeat 1 148 0 3 999 419 136 35 28 chr17 54311279 54311423 -40961228 + (TTATA)n Simple_repeat Simple_repeat 5 149 0 3 999 27 103 0 0 chr17 54311442 54311539 -40961112 + AT_rich Low_complexity Low_complexity 1 97 0 3 999 887 294 49 115 chr17 54311577 54312349 -40960302 + L1_Mur2 LINE L1 4253 4973 -904 3 999 1270 291 156 16 chr17 54312356 54313293 -40959358 - L1M2 LINE L1 -822 5321 4254 3 999 267 265 0 42 chr17 54313299 54313370 -40959281 + B3A SINE B2 4 71 -127 3 999 406 290 0 0 chr17 54313370 54313463 -40959188 - L1_Mur3 LINE L1 -2039 3841 3749 4 999 256 293 31 42 chr17 54313464 54313560 -40959091 + MLT1F2 LTR MaLR 118 212 -348 4 999 375 23 0 0 chr17 54313800 54313844 -40958807 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 999 455 277 69 0 chr17 54314932 54315062 -40957589 - B1F1 SINE Alu -2 147 9 4 999 9536 98 30 1 chr17 54315266 54316689 -40955962 - L1_Mm LINE L1 -1186 4697 3234 4 999 7361 72 6 1 chr17 54316689 54317639 -40955012 + L1_Mus1 LINE L1 5613 6567 0 4 999 7900 102 3 0 chr17 54317645 54318786 -40953865 - L1_Mm LINE L1 -2637 3246 2102 4 999 520 114 0 0 chr17 54318782 54318852 -40953799 - L1VL1 LINE L1 -5930 492 423 4 999 2114 192 14 14 chr17 54318848 54319314 -40953337 - L1VL1 LINE L1 -5959 463 3 4 999 1436 207 124 7 chr17 54319364 54319835 -40952816 - RLTR11A2 LTR ERVK -1 526 1 4 999 414 0 0 0 chr17 54320370 54320416 -40952235 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 999 464 322 102 15 chr17 54320573 54320778 -40951873 - MT2A LTR ERVL -2 531 309 4 999 3420 166 28 25 chr17 54320964 54321562 -40951089 + RMER13A LTR ERVK 9 608 -252 4 999 248 260 200 17 chr17 54321537 54321593 -40951058 - MLT2B3 LTR ERVL -341 213 1 4 999 438 275 11 6 chr17 54321593 54321717 -40950934 - MTEa LTR MaLR -258 121 1 4 999 35 0 0 0 chr17 54321783 54321818 -40950833 + AT_rich Low_complexity Low_complexity 1 35 0 4 999 447 92 0 0 chr17 54322001 54322066 -40950585 + (TG)n Simple_repeat Simple_repeat 2 66 0 4 999 195 42 0 0 chr17 54322155 54322179 -40950472 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 999 2371 248 102 55 chr17 54322196 54323073 -40949578 + Lx9 LINE L1 3625 4515 -1332 4 999 3244 38 5 10 chr17 54323073 54323471 -40949180 + MTA_Mm LTR MaLR 1 396 0 4 999 2371 248 102 55 chr17 54323471 54323796 -40948855 + Lx9 LINE L1 4516 4883 -964 4 999 1526 228 93 45 chr17 54323767 54324209 -40948442 + Lx2B LINE L1 6538 7000 0 4 999 3677 289 83 37 chr17 54324202 54326694 -40945957 + Lx9 LINE L1 4831 7608 -36 4 999 21 0 0 0 chr17 54326733 54326754 -40945897 + AT_rich Low_complexity Low_complexity 1 21 0 4 999 29 70 0 0 chr17 54327527 54327584 -40945067 + AT_rich Low_complexity Low_complexity 1 57 0 4 999 823 201 168 12 chr17 54327633 54327891 -40944760 - MTD LTR MaLR -13 406 115 4 999 527 306 23 41 chr17 54327903 54328121 -40944530 + Lx9 LINE L1 7225 7438 -206 4 999 21 57 0 0 chr17 54328250 54328285 -40944366 + AT_rich Low_complexity Low_complexity 1 35 0 4 999 180 163 0 0 chr17 54328374 54328417 -40944234 + A-rich Low_complexity Low_complexity 1 43 0 4 999 670 145 26 0 chr17 54328417 54328534 -40944117 - MTD LTR MaLR -299 120 1 4 999 1116 91 17 0 chr17 54328775 54328951 -40943700 + (TC)n Simple_repeat Simple_repeat 2 180 0 4 999 314 340 25 19 chr17 54329153 54329315 -40943336 + MIR SINE MIR 31 193 -69 4 999 1644 186 88 38 chr17 54329403 54329823 -40942828 - RMER10A LTR ERVL -1 441 1 4 999 205 68 0 102 chr17 54329930 54329979 -40942672 + T-rich Low_complexity Low_complexity 2 45 0 4 999 432 261 63 45 chr17 54330035 54330256 -40942395 + L1MA9 LINE L1 5823 6047 -265 4 999 956 161 0 11 chr17 54330755 54330937 -40941714 + CT-rich Low_complexity Low_complexity 1 180 0 4 999 186 150 0 0 chr17 54331986 54332026 -40940625 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 999 8522 35 0 0 chr17 54332361 54333382 -40939269 - L1Md_T LINE L1 0 6582 5587 4 999 250 257 95 0 chr17 54333525 54333628 -40939023 + Lx9 LINE L1 5799 5909 -1787 4 999 422 197 16 81 chr17 54333647 54333756 -40938895 - ORR1E LTR MaLR -6 353 257 4 999 1261 34 0 0 chr17 54333799 54333945 -40938706 + B1_Mus2 SINE Alu 2 147 0 4 999 783 306 141 20 chr17 54334159 54335065 -40937586 - L1M4 LINE L1 -1532 4614 3599 4 999 1136 76 7 0 chr17 54336436 54336581 -40936070 + B1_Mus2 SINE Alu 2 147 0 4 999 33 0 0 0 chr17 54336810 54336843 -40935808 + AT_rich Low_complexity Low_complexity 1 33 0 4 999 2117 47 0 0 chr17 54337077 54337332 -40935319 - L1Md_T LINE L1 -3 6579 6325 4 999 255 150 0 0 chr17 54337333 54337373 -40935278 - L1Md_A LINE L1 -6459 265 226 4 999 438 75 38 0 chr17 54337456 54337536 -40935115 + (TG)n Simple_repeat Simple_repeat 2 84 0 4 999 226 292 138 0 chr17 54337546 54337611 -40935040 + MER58D DNA MER1_type 4 77 -309 4 999 934 281 45 16 chr17 54337612 54338068 -40934583 - Lx6 LINE L1 -605 6855 6166 4 999 935 288 158 28 chr17 54338083 54338585 -40934066 + Lx6 LINE L1 6490 7432 -28 4 999 240 271 65 72 chr17 54338626 54338765 -40933886 + MER58D DNA MER1_type 71 208 -178 4 999 379 297 39 8 chr17 54339063 54339192 -40933459 - B1_Mur4 SINE Alu -7 143 11 4 999 349 333 13 40 chr17 54339192 54339204 -40933447 - ID_B1 SINE B4 0 170 79 4 999 288 0 0 0 chr17 54340352 54340384 -40932267 + (TTA)n Simple_repeat Simple_repeat 2 33 0 4 999 1076 52 52 0 chr17 54340387 54340523 -40932128 - B1_Mm SINE Alu -4 143 1 4 999 542 260 181 28 chr17 54340551 54340915 -40931736 - L1MA6 LINE L1 -13 6287 5868 4 999 701 23 11 0 chr17 54341049 54341136 -40931515 + (TC)n Simple_repeat Simple_repeat 1 88 0 4 999 396 0 0 0 chr17 54342174 54342218 -40930433 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 999 592 271 8 30 chr17 54343977 54344110 -40928541 - RSINE1 SINE B4 -32 133 4 4 999 1186 68 7 0 chr17 54344563 54344709 -40927942 + B1_Mus1 SINE Alu 2 148 0 4 999 249 98 0 0 chr17 54344721 54344762 -40927889 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 4 999 252 207 11 65 chr17 54344762 54344855 -40927796 + Lx4B LINE L1 6964 7051 -7 4 999 232 178 22 0 chr17 54345892 54345937 -40926714 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 4 999 618 317 41 41 chr17 54345996 54346341 -40926310 + Lx9 LINE L1 7010 7354 -290 4 999 197 86 57 0 chr17 54346341 54346376 -40926275 + (AGGGGG)n Simple_repeat Simple_repeat 4 40 0 4 999 188 130 22 0 chr17 54346576 54346622 -40926029 + A-rich Low_complexity Low_complexity 3 49 0 4 999 22 35 0 0 chr17 54346625 54346654 -40925997 + AT_rich Low_complexity Low_complexity 1 29 0 4 999 7171 71 0 19 chr17 54346803 54347936 -40924715 - L1_Mus2 LINE L1 -1 6565 5455 4 999 387 0 0 0 chr17 54348498 54348541 -40924110 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 999 441 0 0 0 chr17 54348541 54348589 -40924062 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 999 204 182 0 0 chr17 54349440 54349484 -40923167 + (CAA)n Simple_repeat Simple_repeat 2 45 0 4 999 212 255 21 31 chr17 54349882 54349979 -40922672 + CT-rich Low_complexity Low_complexity 3 98 0 4 999 412 126 11 11 chr17 54350016 54350104 -40922547 + (TTCC)n Simple_repeat Simple_repeat 4 91 0 4 999 8406 34 4 0 chr17 54350282 54351274 -40921377 + L1Md_F2 LINE L1 5587 6582 0 4 999 344 265 36 7 chr17 54351296 54351433 -40921218 + Lx9 LINE L1 7504 7644 0 4 999 584 262 82 12 chr17 54352484 54352766 -40919885 + L1MA6 LINE L1 5992 6299 -1 4 999 573 52 0 0 chr17 54353012 54353089 -40919562 + L1_Mus2 LINE L1 6490 6566 0 4 999 302 298 0 87 chr17 54353836 54353939 -40918712 - L1MC LINE L1 -2118 4028 3935 4 999 576 172 0 0 chr17 54355332 54355448 -40917203 + GA-rich Low_complexity Low_complexity 6 121 0 4 999 336 305 39 13 chr17 54355748 54355901 -40916750 - Lx9 LINE L1 -1043 6601 6445 4 999 426 39 0 0 chr17 54355970 54356022 -40916629 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 999 370 272 95 8 chr17 54356228 54356354 -40916297 - Lx9 LINE L1 -1670 5974 5838 4 999 484 250 13 13 chr17 54356372 54356526 -40916125 - L1_Mur1 LINE L1 -2236 3650 3497 4 999 302 136 30 0 chr17 54356533 54356599 -40916052 + CT-rich Low_complexity Low_complexity 4 71 0 4 999 532 270 45 48 chr17 54356623 54356958 -40915693 - L1_Rod LINE L1 -2806 3041 2708 4 999 326 133 13 26 chr17 54356956 54357033 -40915618 + Lx4A LINE L1 6974 7049 -9 4 999 1689 244 48 13 chr17 54357422 54357816 -40914835 + MTC LTR MaLR 1 408 -13 4 999 260 341 12 24 chr17 54359418 54359502 -40913149 - ID4_ SINE ID 0 83 1 4 999 350 21 0 21 chr17 54361334 54361382 -40911269 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 4 999 1077 57 21 21 chr17 54361382 54361515 -40911136 - B1_Mus1 SINE Alu -10 138 3 4 999 923 217 21 26 chr17 54361796 54361990 -40910661 - ORR1D1 LTR MaLR -181 193 1 4 999 1019 296 109 39 chr17 54362143 54362502 -40910149 - MTD LTR MaLR -35 384 1 4 999 255 61 0 0 chr17 54363368 54363401 -40909250 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 4 999 398 305 62 8 chr17 54363419 54363548 -40909103 - RSINE1 SINE B4 -27 138 3 4 999 645 14 0 0 chr17 54365634 54365708 -40906943 + (TCC)n Simple_repeat Simple_repeat 3 76 0 4 999 264 122 0 0 chr17 54365711 54365752 -40906899 + (CACCAT)n Simple_repeat Simple_repeat 4 44 0 4 999 434 255 10 20 chr17 54365801 54365901 -40906750 - B1_Mur1 SINE Alu -2 147 49 4 999 425 342 12 31 chr17 54367285 54367448 -40905203 - Tigger9b DNA MER2_type -464 160 1 4 999 320 290 21 0 chr17 54367739 54367832 -40904819 + MER5B DNA MER1_type 10 104 -74 4 999 707 0 12 0 chr17 54367951 54368034 -40904617 + (TC)n Simple_repeat Simple_repeat 2 85 0 4 999 2094 178 31 0 chr17 54368038 54368420 -40904231 + ORR1B1 LTR MaLR 1 394 0 4 999 830 306 42 0 chr17 54368446 54368638 -40904013 - B4 SINE B4 -14 278 77 4 999 473 0 18 0 chr17 54368638 54368695 -40903956 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 999 830 306 42 0 chr17 54368695 54368767 -40903884 - B4 SINE B4 -216 76 4 4 999 3965 50 6 13 chr17 54369887 54370411 -40902240 - L1Md_F2 LINE L1 -9 6573 6054 4 999 4505 29 5 0 chr17 54370404 54370965 -40901686 - L1Md_F2 LINE L1 -399 6183 5620 4 999 384 22 0 0 chr17 54371587 54371632 -40901019 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 999 222 128 42 21 chr17 54371938 54371986 -40900665 + T-rich Low_complexity Low_complexity 2 50 0 5 999 296 328 87 60 chr17 54372212 54372397 -40900254 + ORR1E LTR MaLR 6 195 -164 5 999 852 214 38 47 chr17 54372601 54372778 -40899873 - RMER17C LTR ERVK 0 410 231 5 999 1359 67 0 0 chr17 54372778 54372957 -40899694 + (GA)n Simple_repeat Simple_repeat 2 180 0 5 999 852 239 32 44 chr17 54372957 54373088 -40899563 - RMER17C LTR ERVK -180 230 1 5 999 3671 128 20 30 chr17 54373088 54373748 -40898903 - RMER17C-int LTR ERVK 0 3238 2586 5 999 265 182 0 0 chr17 54373748 54373792 -40898859 + LSU-rRNA_Hsa rRNA rRNA 4202 4245 -790 5 999 2937 162 30 58 chr17 54373792 54374643 -40898008 - RMER17C-int LTR ERVK -701 2537 1803 5 999 294 29 0 0 chr17 54374849 54374884 -40897767 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 999 222 128 42 21 chr17 54375190 54375238 -40897413 + T-rich Low_complexity Low_complexity 2 50 0 5 999 296 328 87 60 chr17 54375464 54375649 -40897002 + ORR1E LTR MaLR 6 195 -164 5 999 923 197 39 30 chr17 54375853 54376033 -40896618 - RMER17C LTR ERVK 0 410 228 5 999 1305 78 0 0 chr17 54376033 54376212 -40896439 + (GA)n Simple_repeat Simple_repeat 1 179 0 5 999 923 239 26 39 chr17 54376212 54376354 -40896297 - RMER17C LTR ERVK -183 227 1 5 999 3671 128 20 30 chr17 54376354 54377014 -40895637 - RMER17C-int LTR ERVK 0 3238 2586 5 999 265 182 0 0 chr17 54377014 54377058 -40895593 + LSU-rRNA_Hsa rRNA rRNA 4202 4245 -790 5 999 6572 185 54 114 chr17 54377058 54379624 -40893027 - RMER17C-int LTR ERVK -701 2537 224 5 999 365 215 8 158 chr17 54379636 54379763 -40892888 - RMER17C-int LTR ERVK -3130 108 1 5 999 315 0 0 0 chr17 54379775 54379810 -40892841 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 5 999 265 195 24 61 chr17 54379871 54379953 -40892698 + RMER17C LTR ERVK 332 410 0 5 999 351 0 0 0 chr17 54380901 54380940 -40891711 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 999 438 69 0 0 chr17 54381241 54381299 -40891352 + (CAA)n Simple_repeat Simple_repeat 3 60 0 5 999 602 296 43 24 chr17 54382052 54382263 -40890388 - MuRRS4-int LTR ERV1 -1043 4020 3806 5 999 3500 160 60 11 chr17 54382283 54382895 -40889756 + RLTR26 LTR ERVK 1 642 0 5 999 295 257 29 16 chr17 54382930 54383093 -40889558 - MuRRS-int LTR ERV1 -880 3810 3747 5 999 293 312 35 28 chr17 54383634 54383779 -40888872 - MuRRS-int LTR ERV1 -2110 2953 2808 5 999 636 330 29 0 chr17 54384065 54384341 -40888310 - MMERGLN-int LTR ERV1 -3743 3813 3530 5 999 269 275 23 34 chr17 54384736 54384873 -40887778 - MMERGLN-int LTR ERV1 -4467 3089 2930 5 999 553 345 57 36 chr17 54384921 54385393 -40887258 - MMERGLN-int LTR ERV1 -5936 1842 1361 5 999 367 120 0 0 chr17 54386027 54386077 -40886574 - RLTR23 LTR ERV1 -380 50 1 5 999 397 216 9 64 chr17 54386130 54386239 -40886412 + RMER17C LTR ERVK 301 403 -7 5 999 3109 254 63 46 chr17 54386239 54386729 -40885922 + L1_Rod LINE L1 3101 3600 -2247 5 999 756 52 0 0 chr17 54386729 54386826 -40885825 + (GAAA)n Simple_repeat Simple_repeat 2 98 0 5 999 1465 199 14 162 chr17 54386827 54387332 -40885319 + RLTR23 LTR ERV1 1 430 0 5 999 3109 254 63 46 chr17 54387332 54388143 -40884508 + L1_Rod LINE L1 3601 4426 -1421 5 999 1303 188 117 119 chr17 54388198 54388584 -40884067 - RLTR41 LTR ERV1 0 446 62 5 999 1291 210 42 37 chr17 54388609 54388989 -40883662 + L1_Rod LINE L1 4466 4847 -1000 5 999 709 232 59 20 chr17 54389000 54389255 -40883396 - L1_Rod LINE L1 -517 5330 5066 5 999 2267 201 45 6 chr17 54389245 54389731 -40882920 + L1_Rod LINE L1 5336 5840 -7 5 999 362 235 19 10 chr17 54390815 54390918 -40881733 + L1MB7 LINE L1 6034 6137 -47 5 999 3940 168 75 8 chr17 54391093 54391856 -40880795 - RLTR42-int LTR ERVK -255 5267 4454 5 999 765 284 56 73 chr17 54391856 54392251 -40880400 - RMER17C LTR ERVK -22 388 1 5 999 2677 167 75 4 chr17 54392253 54392747 -40879904 - RLTR42-int LTR ERVK -1077 4445 3917 5 999 718 197 195 11 chr17 54392776 54392966 -40879685 - URR1B DNA MER1_type 0 225 1 5 999 3015 188 63 7 chr17 54392993 54393694 -40878957 - RLTR42-int LTR ERVK -1913 3609 2820 5 999 1022 248 12 101 chr17 54393694 54394030 -40878621 + L1VL1 LINE L1 6 503 -5919 5 124 13351 134 24 9 chr17 54394159 54395840 -40876811 + L1Md_F LINE L1 522 2240 -3643 5 1000 3182 44 23 0 chr17 54395840 54396227 -40876424 - MTA_Mm LTR MaLR 0 396 1 5 1000 13351 108 4 9 chr17 54396227 54397183 -40875468 + L1Md_F LINE L1 2241 3181 -2702 5 1000 225 0 0 0 chr17 54397183 54397208 -40875443 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 5 1000 13351 108 4 9 chr17 54397208 54397292 -40875359 + L1Md_F LINE L1 3182 3265 -2618 5 1000 38479 7 21 2 chr17 54397294 54402326 -40870325 + L1Md_A LINE L1 433 5586 -297 5 1000 9046 1 0 0 chr17 54402326 54403322 -40869329 + L1Md_A LINE L1 5587 6582 0 5 1000 10344 104 124 1 chr17 54403322 54404990 -40867661 + L1Md_F LINE L1 3258 5131 -752 5 1000 471 230 0 0 chr17 54405208 54405321 -40867330 + (TA)n Simple_repeat Simple_repeat 2 114 0 5 1000 288 137 0 0 chr17 54405531 54405582 -40867069 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1000 354 45 0 0 chr17 54405582 54405626 -40867025 + (GA)n Simple_repeat Simple_repeat 1 44 0 5 1000 21 71 0 0 chr17 54405695 54405737 -40866914 + AT_rich Low_complexity Low_complexity 1 42 0 5 1000 1024 235 145 31 chr17 54407408 54407698 -40864953 + MTD LTR MaLR 1 323 -96 5 1000 1023 101 30 0 chr17 54407722 54407891 -40864760 - MYSERV16_I-int LTR ERVK -1086 1240 1067 5 1000 3526 209 78 35 chr17 54407881 54408854 -40863797 - MYSERV16_I-int LTR ERVK -1449 1393 1 5 1000 270 276 120 33 chr17 54409445 54409464 -40863187 - YREP_Mm Unknown Unknown -1467 345 326 5 1000 1072 82 0 39 chr17 54409464 54409617 -40863034 + B1_Mm SINE Alu 1 147 0 5 1000 270 276 120 33 chr17 54409617 54409747 -40862904 - YREP_Mm Unknown Unknown -1487 325 183 5 1000 465 218 135 9 chr17 54409641 54409752 -40862899 + ID_B1 SINE B4 99 223 -1 5 1000 5428 177 42 44 chr17 54409968 54410750 -40861901 - RLTR25A LTR ERVK -3 1100 330 5 1000 198 0 0 0 chr17 54410750 54410772 -40861879 + (TA)n Simple_repeat Simple_repeat 1 22 0 5 1000 5428 177 42 44 chr17 54410772 54411092 -40861559 - RLTR25A LTR ERVK -774 329 3 5 1000 294 309 0 0 chr17 54412060 54412128 -40860523 - ID SINE ID -154 70 3 5 1000 351 270 34 0 chr17 54412161 54412250 -40860401 - B1F SINE Alu -22 127 36 5 1000 21 36 0 0 chr17 54414179 54414207 -40858444 + AT_rich Low_complexity Low_complexity 1 28 0 5 1000 298 208 153 0 chr17 54415082 54415154 -40857497 + ID4 SINE ID 1 83 0 5 1000 209 200 0 35 chr17 54415162 54415219 -40857432 + GA-rich Low_complexity Low_complexity 5 59 0 5 1000 470 326 65 29 chr17 54416915 54417054 -40855597 - RSINE1 SINE B4 -20 145 2 5 1000 2522 106 5 5 chr17 54418446 54418825 -40853826 - L1_Mus3 LINE L1 -1 6637 6259 5 1000 822 115 0 0 chr17 54418826 54418939 -40853712 + L1_Mus3 LINE L1 6132 6244 -394 5 1000 406 327 31 19 chr17 54419311 54419470 -40853181 - RSINE1 SINE B4 -2 163 3 5 1000 499 316 77 5 chr17 54421528 54421722 -40850929 + MLT1A0 LTR MaLR 142 349 -16 5 1000 1200 41 0 20 chr17 54422740 54422890 -40849761 - B1_Mus2 SINE Alu 0 147 1 5 1000 189 196 0 0 chr17 54423911 54423957 -40848694 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 1000 636 327 25 36 chr17 54424151 54424427 -40848224 - Tigger5 DNA MER2_type -2133 273 1 5 1000 264 127 0 0 chr17 54424516 54424571 -40848080 + (A)n Simple_repeat Simple_repeat 1 55 0 5 1000 315 202 0 0 chr17 54426579 54426658 -40845993 + GA-rich Low_complexity Low_complexity 2 80 0 5 1000 276 319 25 0 chr17 54427192 54427311 -40845340 - Charlie22a DNA MER1_type -231 260 139 5 1000 759 214 52 6 chr17 54427499 54427673 -40844978 - RMER1C Other Other -290 1052 871 5 1000 1157 185 13 100 chr17 54427675 54427975 -40844676 + RMER1C Other Other 1068 1341 -1 5 1000 919 206 33 28 chr17 54427987 54428202 -40844449 + B3 SINE B2 1 216 0 5 1000 360 0 0 0 chr17 54429652 54429692 -40842959 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 1000 445 126 23 11 chr17 54430728 54430816 -40841835 + GA-rich Low_complexity Low_complexity 2 90 0 5 1000 1035 114 17 0 chr17 54430816 54430991 -40841660 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 5 1000 253 289 13 26 chr17 54433311 54433389 -40839262 + MER33 DNA MER1_type 6 82 -242 5 1000 24 0 0 0 chr17 54433538 54433562 -40839089 + AT_rich Low_complexity Low_complexity 1 24 0 5 1000 291 210 99 10 chr17 54433948 54434049 -40838602 + Lx9 LINE L1 7528 7637 -7 5 1000 405 0 0 0 chr17 54434592 54434637 -40838014 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1000 26 30 0 0 chr17 54436755 54436788 -40835863 + AT_rich Low_complexity Low_complexity 1 33 0 5 1000 647 163 8 0 chr17 54436944 54437067 -40835584 + CT-rich Low_complexity Low_complexity 2 125 0 5 1000 347 60 20 0 chr17 54437329 54437379 -40835272 + (CCCCCA)n Simple_repeat Simple_repeat 3 53 0 5 1000 540 0 0 0 chr17 54439231 54439291 -40833360 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 5 1000 300 186 0 0 chr17 54440515 54440574 -40832077 + (TA)n Simple_repeat Simple_repeat 1 59 0 5 1000 983 216 22 22 chr17 54440886 54441109 -40831542 + ORR1D1 LTR MaLR 1 223 -151 5 1000 699 310 77 48 chr17 54441112 54441522 -40831129 + Tigger5 DNA MER2_type 2170 2406 0 5 1000 210 167 0 23 chr17 54441718 54441761 -40830890 + GA-rich Low_complexity Low_complexity 2 43 0 5 1000 741 23 0 0 chr17 54441761 54441848 -40830803 + (GGGAA)n Simple_repeat Simple_repeat 4 90 0 5 1000 1317 193 134 54 chr17 54442038 54442173 -40830478 + ORR1C2 LTR MaLR 3 136 -248 5 1000 913 71 76 13 chr17 54442173 54442330 -40830321 - L1_Mus3 LINE L1 0 6638 6472 5 1000 1317 193 134 54 chr17 54442330 54442545 -40830106 + ORR1C2 LTR MaLR 137 381 -3 5 1000 706 274 125 43 chr17 54443100 54443356 -40829295 - B4A SINE B4 -13 279 3 5 1000 679 274 55 21 chr17 54443440 54443675 -40828976 - RMER15 LTR ERVL -17 558 316 5 1000 329 306 23 17 chr17 54443723 54443899 -40828752 - L1M4 LINE L1 -3824 2322 2146 5 1000 525 301 13 92 chr17 54444147 54444374 -40828277 - B3 SINE B2 -6 210 2 5 1000 450 313 0 11 chr17 54444412 54444544 -40828107 + (TATG)n Simple_repeat Simple_repeat 3 132 0 5 1000 2114 186 35 15 chr17 54444544 54444943 -40827708 - MTB_Mm LTR MaLR 0 407 1 5 1000 450 313 0 11 chr17 54444943 54444991 -40827660 + (TATG)n Simple_repeat Simple_repeat 3 50 0 5 1000 1546 244 21 24 chr17 54444992 54445365 -40827286 + ORR1D1 LTR MaLR 1 372 -2 5 1000 2284 246 79 63 chr17 54445367 54445573 -40827078 + ORR1D1-int LTR MaLR 1 251 -1119 5 1000 1827 199 24 93 chr17 54445573 54446023 -40826628 + MTC LTR MaLR 1 419 -2 5 1000 2284 246 79 63 chr17 54446023 54446527 -40826124 + ORR1D1-int LTR MaLR 252 722 -648 5 1000 994 266 77 3 chr17 54446548 54446802 -40825849 - ORR1D-int LTR MaLR -351 1019 768 5 1000 513 198 6 28 chr17 54446840 54447022 -40825629 + (TATG)n Simple_repeat Simple_repeat 1 178 0 5 1000 435 318 6 11 chr17 54447042 54447108 -40825543 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1000 407 68 0 17 chr17 54447108 54447168 -40825483 + (TATG)n Simple_repeat Simple_repeat 4 62 0 5 1000 435 318 6 11 chr17 54447168 54447279 -40825372 + (TG)n Simple_repeat Simple_repeat 2 113 0 5 1000 807 197 0 0 chr17 54447298 54447476 -40825175 + (TA)n Simple_repeat Simple_repeat 1 178 0 5 1000 41 0 0 0 chr17 54447527 54447568 -40825083 + AT_rich Low_complexity Low_complexity 1 41 0 5 1000 271 388 11 0 chr17 54447821 54447999 -40824652 + Lx8 LINE L1 7050 7229 -244 5 1000 1666 189 46 7 chr17 54448547 54448851 -40823800 - MTC LTR MaLR -105 316 1 5 1000 789 289 25 0 chr17 54448853 54449012 -40823639 - B3 SINE B2 -46 170 8 5 1000 320 376 76 20 chr17 54449078 54449276 -40823375 + L1MD2 LINE L1 5994 6202 -157 6 1000 303 303 79 34 chr17 54451164 54451543 -40821108 - L1MC1 LINE L1 -116 6217 5822 6 1000 269 286 74 13 chr17 54451546 54451695 -40820956 - L1MC1 LINE L1 -1372 4774 4617 6 1000 458 234 99 22 chr17 54451718 54451775 -40820876 - Lx9 LINE L1 -7 7637 7579 6 1000 300 44 0 0 chr17 54451775 54451820 -40820831 - L1_Mus2 LINE L1 0 6566 6522 6 1000 458 234 99 22 chr17 54451820 54451985 -40820666 - Lx9 LINE L1 -66 7578 7398 6 1000 14749 97 16 12 chr17 54452010 54454767 -40817884 + L1VL4 LINE L1 191 2950 -609 6 1000 1120 59 0 0 chr17 54454767 54454902 -40817749 + B1_Mus2 SINE Alu 1 135 -12 6 1000 527 0 16 0 chr17 54454905 54454968 -40817683 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 6 1000 14749 91 15 9 chr17 54454968 54455204 -40817447 + L1VL4 LINE L1 2951 3191 -368 6 1000 2342 158 36 0 chr17 54455204 54455683 -40816968 - Lx3C LINE L1 -1060 5916 5421 6 1000 3900 96 16 11 chr17 54455688 54456317 -40816334 - L1_Mus1 LINE L1 -4 6993 6006 6 1000 329 71 36 0 chr17 54457652 54457708 -40814943 + (CCAA)n Simple_repeat Simple_repeat 2 59 0 6 1000 354 250 133 9 chr17 54458234 54458347 -40814304 + HAL1-3A_ME LINE L1 1986 2112 -746 6 1000 615 306 6 34 chr17 54458382 54458561 -40814090 - MT2A LTR ERVL -66 467 294 6 1000 630 49 0 0 chr17 54458673 54458755 -40813896 + (CA)n Simple_repeat Simple_repeat 2 83 0 6 1000 886 257 37 0 chr17 54458755 54458942 -40813709 - B3 SINE B2 -22 194 1 6 1000 505 299 93 21 chr17 54458959 54459195 -40813456 - Lx8 LINE L1 -2 7471 7219 6 1000 305 324 121 117 chr17 54459321 54459594 -40813057 - RMER13B LTR ERVK -410 498 225 6 1000 398 310 0 0 chr17 54459861 54459974 -40812677 - Lx8 LINE L1 -589 6884 6772 6 1000 410 307 71 24 chr17 54459975 54460145 -40812506 - MTEb LTR MaLR -199 180 3 6 1000 543 101 0 0 chr17 54460325 54460404 -40812247 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 6 1000 189 107 0 0 chr17 54460600 54460628 -40812023 + (TATAA)n Simple_repeat Simple_repeat 1 28 0 6 1000 3440 28 5 0 chr17 54461040 54461434 -40811217 + MTA_Mm LTR MaLR 1 396 0 6 1000 6998 86 1 1 chr17 54461556 54462542 -40810109 - L1_Mus4 LINE L1 -8 6628 5643 6 1000 407 139 111 0 chr17 54463656 54463728 -40808923 - Lx4A LINE L1 -558 6500 6421 6 1000 1865 129 115 0 chr17 54463726 54464075 -40808576 - Lx4A LINE L1 -882 6176 5788 6 1000 2813 143 14 26 chr17 54464077 54464573 -40808078 + Lx4A LINE L1 6522 7011 -47 6 1000 22 80 0 0 chr17 54465293 54465343 -40807308 + AT_rich Low_complexity Low_complexity 1 50 0 6 1000 2701 235 73 29 chr17 54465528 54466319 -40806332 - RMER13A LTR ERVK 0 860 1 6 1000 6600 101 12 20 chr17 54467173 54468259 -40804392 + Lx LINE L1 5506 6581 -73 6 1000 266 335 53 106 chr17 54469283 54469490 -40803161 - MLT1A LTR MaLR -177 197 2 6 1000 423 0 0 0 chr17 54469616 54469663 -40802988 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1000 324 64 0 0 chr17 54470087 54470134 -40802517 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1000 1211 46 0 0 chr17 54470185 54470338 -40802313 + L1Md_F2 LINE L1 5434 5586 -297 6 1000 8331 32 0 9 chr17 54470338 54471342 -40801309 + L1Md_F2 LINE L1 5587 6581 -1 6 1000 1642 235 26 24 chr17 54471342 54471795 -40800856 - Lx7 LINE L1 -289 7407 6954 6 1000 6135 197 43 98 chr17 54471810 54471942 -40800709 - RLTR21 LTR ERVK -7 1565 1418 6 1000 243 0 0 0 chr17 54471942 54471969 -40800682 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 1000 6135 197 43 98 chr17 54471969 54473070 -40799581 - RLTR21 LTR ERVK -155 1417 432 6 1000 279 0 42 42 chr17 54473070 54473118 -40799533 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 6 1000 6135 197 43 98 chr17 54473118 54473539 -40799112 - RLTR21 LTR ERVK -1141 431 2 6 1000 1890 249 106 0 chr17 54473539 54474060 -40798591 - Lx7 LINE L1 -744 6952 6377 6 1000 503 236 73 60 chr17 54474431 54474725 -40797926 + Lx8 LINE L1 5143 5451 -429 6 1000 570 278 96 37 chr17 54474733 54474880 -40797771 + B3A SINE B2 1 161 -37 6 1000 510 70 0 0 chr17 54474880 54474951 -40797700 + (CA)n Simple_repeat Simple_repeat 1 71 0 6 1000 570 278 96 37 chr17 54474951 54474990 -40797661 + B3A SINE B2 162 198 0 6 1000 556 253 115 25 chr17 54475174 54475417 -40797234 + Lx8 LINE L1 5456 5720 -127 6 1000 1219 327 43 6 chr17 54475515 54476028 -40796623 + Lx8 LINE L1 6191 6722 -751 6 1000 1311 262 36 19 chr17 54476041 54476195 -40796456 + ORR1D1 LTR MaLR 8 164 -210 6 1000 687 25 0 0 chr17 54476195 54476276 -40796375 + (TCCC)n Simple_repeat Simple_repeat 1 81 0 6 1000 1311 262 36 19 chr17 54476276 54476428 -40796223 + ORR1D1 LTR MaLR 165 318 -56 6 1000 3699 108 83 2 chr17 54476435 54476548 -40796103 - Lx LINE L1 -6 6648 6536 6 1000 261 0 0 0 chr17 54476548 54476577 -40796074 + (CCCA)n Simple_repeat Simple_repeat 1 29 0 6 1000 3699 108 83 2 chr17 54476577 54477041 -40795610 - Lx LINE L1 -119 6535 6025 6 1000 536 88 12 0 chr17 54477042 54477122 -40795529 + Lx LINE L1 5811 5891 -763 6 1000 349 159 29 0 chr17 54477122 54477191 -40795460 + ORR1D1 LTR MaLR 323 393 -1 6 1000 967 330 108 19 chr17 54477195 54477825 -40794826 + Lx8 LINE L1 6732 7417 -56 6 1000 345 147 0 74 chr17 54478014 54478095 -40794556 - Lx9 LINE L1 0 7644 7570 6 1000 7528 134 77 5 chr17 54478113 54479438 -40793213 - Lx4B LINE L1 -39 7019 5600 6 1000 277 286 143 37 chr17 54479891 54480095 -40792556 - MLT1A0 LTR MaLR -129 230 1 6 1000 33 0 0 0 chr17 54480598 54480631 -40792020 + AT_rich Low_complexity Low_complexity 1 33 0 6 1000 1404 71 0 0 chr17 54480707 54481059 -40791592 + (TCCA)n Simple_repeat Simple_repeat 1 352 0 6 1000 1882 140 31 82 chr17 54481059 54481472 -40791179 + RLTR9C LTR ERVK 1 392 -1 6 1000 630 26 0 0 chr17 54481472 54481548 -40791103 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 6 1000 414 57 0 0 chr17 54481629 54481682 -40790969 + (GA)n Simple_repeat Simple_repeat 2 54 0 6 1000 275 290 46 67 chr17 54481684 54481815 -40790836 - B3 SINE B2 -36 162 5 6 1000 272 197 40 40 chr17 54481860 54481934 -40790717 + L1MA8 LINE L1 5830 5903 -388 6 1000 1134 151 47 0 chr17 54482186 54482378 -40790273 + RLTR11A LTR ERVK 1 201 -327 6 1000 247 300 0 0 chr17 54482486 54482556 -40790095 - ID4 SINE ID -10 73 4 6 1000 5323 33 2 8 chr17 54483522 54484160 -40788491 - L1Md_F3 LINE L1 -1 6583 5950 6 1000 353 151 32 21 chr17 54484683 54484778 -40787873 - Lx5 LINE L1 -11 7039 6944 6 1000 309 150 17 0 chr17 54485210 54485270 -40787381 - Lx5 LINE L1 -8 7042 6982 6 1000 246 62 0 0 chr17 54485308 54485340 -40787311 + (TTA)n Simple_repeat Simple_repeat 2 33 0 6 1000 483 18 0 0 chr17 54485806 54485862 -40786789 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 1000 220 217 115 16 chr17 54486009 54486070 -40786581 + L3 LINE CR1 150 216 -4273 6 1000 2142 242 21 34 chr17 54487379 54487960 -40784691 - Lx5 LINE L1 -55 6995 6423 6 1000 326 191 0 0 chr17 54488270 54488338 -40784313 - Lx6 LINE L1 -11 7449 7382 6 1000 501 17 0 0 chr17 54488352 54488410 -40784241 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 1000 949 276 159 0 chr17 54488410 54488700 -40783951 - Lx6 LINE L1 -130 7330 6995 6 1000 411 21 0 0 chr17 54488707 54488755 -40783896 + (TC)n Simple_repeat Simple_repeat 1 48 0 6 1000 210 111 0 43 chr17 54488756 54488803 -40783848 + T-rich Low_complexity Low_complexity 5 49 0 6 1000 1093 84 0 0 chr17 54488803 54488945 -40783706 - B1_Mus2 SINE Alu -5 142 1 6 1000 1671 265 25 55 chr17 54488957 54489053 -40783598 - Lx6 LINE L1 -1173 6287 6201 6 1000 3725 62 14 2 chr17 54489053 54489539 -40783112 - L1Md_F2 LINE L1 0 6582 6091 6 1000 1671 265 25 55 chr17 54489539 54490045 -40782606 - Lx6 LINE L1 -1260 6200 5703 6 1000 207 100 0 0 chr17 54490304 54490334 -40782317 + (CCTG)n Simple_repeat Simple_repeat 1 30 0 6 1000 342 138 0 0 chr17 54491232 54491290 -40781361 + (TCTCCC)n Simple_repeat Simple_repeat 3 60 0 6 1000 1331 224 206 9 chr17 54491316 54491758 -40780893 + MT2A LTR ERVL 5 533 0 6 1000 1295 173 4 4 chr17 54493612 54493838 -40778813 - URR1A DNA MER1_type 0 226 1 6 1000 25 0 0 0 chr17 54494536 54494561 -40778090 + AT_rich Low_complexity Low_complexity 1 25 0 6 1000 2985 50 3 0 chr17 54494625 54495002 -40777649 + MTA_Mm LTR MaLR 19 396 0 6 1000 10195 169 20 15 chr17 54495002 54497102 -40775549 - L1_Mur2 LINE L1 -586 5291 3181 6 1000 1382 212 16 8 chr17 54497083 54497454 -40775197 - L1_Mur2 LINE L1 -5815 1271 898 6 1000 211 292 83 28 chr17 54497933 54498042 -40774609 - MIRm SINE MIR -97 179 65 6 1000 31 0 0 0 chr17 54498256 54498287 -40774364 + AT_rich Low_complexity Low_complexity 1 31 0 6 1000 354 251 0 35 chr17 54499204 54499297 -40773354 + B3 SINE B2 1 84 -114 6 1000 507 304 162 24 chr17 54499478 54499768 -40772883 - MER2 DNA MER2_type -1 344 15 6 1000 396 0 0 0 chr17 54500760 54500804 -40771847 + (TC)n Simple_repeat Simple_repeat 2 45 0 1 1000 706 319 34 71 chr17 54500838 54501105 -40771546 - B4A SINE B4 -3 289 33 2 1000 231 36 0 0 chr17 54501118 54501146 -40771505 + (CATCT)n Simple_repeat Simple_repeat 4 31 0 3 1000 697 300 101 4 chr17 54502492 54502760 -40769891 + Lx8 LINE L1 6109 6402 -1071 4 1000 1337 225 216 37 chr17 54502758 54503331 -40769320 + Lx9 LINE L1 6814 7489 -155 5 1000 375 303 28 0 chr17 54503779 54503888 -40768763 + MLT2B3 LTR ERVL 3 114 -440 6 1000 24 0 0 0 chr17 54503890 54503914 -40768737 + AT_rich Low_complexity Low_complexity 1 24 0 7 1000 1661 170 50 83 chr17 54503920 54504317 -40768334 + ORR1C2 LTR MaLR 1 384 0 8 1000 1906 214 39 12 chr17 54504383 54504874 -40767777 - RCHARR1 DNA MER1_type -54 920 417 9 1000 537 16 0 0 chr17 54504899 54504961 -40767690 + (GGA)n Simple_repeat Simple_repeat 1 62 0 1 1000 564 296 23 28 chr17 54504983 54505160 -40767491 + MLT2B3 LTR ERVL 371 546 -8 6 1000 346 322 113 13 chr17 54505329 54505480 -40767171 - B3A SINE B2 -24 174 9 1 1000 545 133 0 0 chr17 54506225 54506323 -40766328 + L1_Mus3 LINE L1 6535 6632 -6 1 1000 504 0 0 0 chr17 54508208 54508264 -40764387 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 1000 29873 98 6 9 chr17 54509053 54514201 -40758450 + L1Md_F2 LINE L1 454 5586 -297 1 1000 8279 37 1 5 chr17 54514201 54515198 -40757453 + L1Md_F2 LINE L1 5587 6579 -3 1 1000 292 147 88 0 chr17 54516129 54516197 -40756454 + U2 snRNA snRNA 1 74 -114 1 1000 1821 192 67 0 chr17 54518038 54518382 -40754269 + MTC LTR MaLR 1 367 -54 1 1000 957 80 0 14 chr17 54518397 54518537 -40754114 + B1_Mm SINE Alu 10 147 0 1 1000 3214 204 12 55 chr17 54519557 54520246 -40752405 - Lx5 LINE L1 -6 7044 6386 1 1000 392 265 82 25 chr17 54520366 54520525 -40752126 - L1_Mur3 LINE L1 -680 5200 5033 1 1000 386 246 39 16 chr17 54520737 54520865 -40751786 + MER2 DNA MER2_type 118 248 -97 2 1000 2441 252 84 7 chr17 54520944 54521648 -40751003 + L1_Mur3 LINE L1 4956 5713 -167 2 1000 2718 178 149 14 chr17 54521691 54522347 -40750304 + L1_Mur3 LINE L1 3621 4365 -1515 2 1000 974 129 6 0 chr17 54522348 54522511 -40750140 + (GAAA)n Simple_repeat Simple_repeat 3 166 0 2 1000 799 45 0 35 chr17 54522590 54522705 -40749946 - B1_Mus2 SINE Alu 0 147 37 2 1000 2113 186 37 68 chr17 54522705 54523275 -40749376 - RLTR31_Mur LTR ERVK -1 552 1 2 1000 1546 195 13 58 chr17 54523283 54523431 -40749220 + L1_Mur3 LINE L1 5056 5204 -676 2 1000 2374 162 13 0 chr17 54523431 54523820 -40748831 - ORR1B1 LTR MaLR 0 394 1 2 1000 1546 195 13 58 chr17 54523820 54524069 -40748582 + L1_Mur3 LINE L1 5205 5435 -445 2 1000 804 205 30 119 chr17 54524063 54524134 -40748517 + Lx7 LINE L1 7390 7453 -243 2 1000 1188 126 21 0 chr17 54524134 54524325 -40748326 - B2_Mm2 SINE B2 0 195 1 2 1000 804 205 30 119 chr17 54524325 54524582 -40748069 + Lx7 LINE L1 7454 7689 -7 2 1000 213 39 0 0 chr17 54524582 54524608 -40748043 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 1000 258 264 62 16 chr17 54524692 54524797 -40747854 + MLT1J-int LTR MaLR 917 1026 -383 3 1000 180 0 0 0 chr17 54525197 54525217 -40747434 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 3 15 462 202 65 73 chr17 54525887 54526010 -40746641 + MTC LTR MaLR 1 122 -299 3 1001 525 312 0 0 chr17 54526155 54526280 -40746371 + B3A SINE B2 1 125 -73 3 1001 504 0 0 0 chr17 54526284 54526340 -40746311 + (TC)n Simple_repeat Simple_repeat 1 56 0 3 1001 360 0 0 0 chr17 54526340 54526379 -40746272 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1001 2920 61 48 3 chr17 54526791 54527170 -40745481 + MTA_Mm LTR MaLR 1 396 0 3 1001 1751 200 32 38 chr17 54527492 54527778 -40744873 + ORR1B2 LTR MaLR 1 291 -76 3 1001 4677 118 37 16 chr17 54527778 54528571 -40744080 + RMER17D2 LTR ERVK 1 809 0 3 1001 1751 200 32 38 chr17 54528571 54528653 -40743998 + ORR1B2 LTR MaLR 292 367 0 3 1001 383 304 87 5 chr17 54529014 54529209 -40743442 + MIR SINE MIR 31 241 -21 3 1001 3845 56 14 0 chr17 54529293 54529779 -40742872 + L1Md_F3 LINE L1 6078 6570 -14 4 1001 2400 119 86 38 chr17 54532792 54533245 -40739406 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1001 6138 42 3 7 chr17 54533247 54533994 -40738657 - IAPEz-int LTR ERVK -2 6479 5736 4 1001 2167 79 0 0 chr17 54533993 54534271 -40738380 - IAPEz-int LTR ERVK -4845 1636 1359 4 1001 3536 90 18 51 chr17 54534271 54535100 -40737551 - IAPEz-int LTR ERVK -5819 662 9 4 1001 2391 122 86 38 chr17 54535101 54535554 -40737097 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1001 181 300 33 0 chr17 54536808 54536868 -40735783 + MER5A DNA MER1_type 128 189 0 4 1001 213 312 102 56 chr17 54536874 54537071 -40735580 + MIR SINE MIR 12 217 -45 4 1001 13830 170 152 19 chr17 54537207 54541673 -40730978 - Lx5 LINE L1 -4 7046 1978 4 1001 395 76 15 0 chr17 54541671 54541743 -40730908 - Lx5 LINE L1 -5863 1223 1080 4 1001 1954 211 46 99 chr17 54541745 54541842 -40730809 - RLTR20C LTR ERVK 0 534 438 4 1001 233 57 29 0 chr17 54541842 54541877 -40730774 + (CAGA)n Simple_repeat Simple_repeat 4 39 0 4 1001 438 20 0 0 chr17 54541878 54541929 -40730722 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 1001 1954 211 46 99 chr17 54541929 54542393 -40730258 - RLTR20C LTR ERVK -97 437 1 4 1001 922 177 34 15 chr17 54542403 54542609 -40730042 - L1_Mur2 LINE L1 -6003 709 500 4 1001 248 414 38 6 chr17 54543008 54543166 -40729485 + Tigger5 DNA MER2_type 76 238 -2168 4 1001 2078 244 103 5 chr17 54543504 54544565 -40728086 + Lx9 LINE L1 734 1906 -3941 5 1001 486 249 164 11 chr17 54544614 54544797 -40727854 + Lx9 LINE L1 2120 2330 -3517 5 1001 1001 262 62 140 chr17 54544830 54545111 -40727540 + Lx9 LINE L1 2520 2807 -3040 5 1001 777 97 186 0 chr17 54545111 54545235 -40727416 + B1_Mus1 SINE Alu 2 148 0 5 1001 1001 262 62 140 chr17 54545235 54545748 -40726903 + Lx9 LINE L1 2808 3252 -2595 5 1001 1680 242 41 80 chr17 54545786 54546173 -40726478 + Lx9 LINE L1 4850 5237 -610 5 1001 1233 48 0 0 chr17 54546173 54546320 -40726331 + B1_Mus1 SINE Alu 2 148 0 5 1001 1680 244 39 78 chr17 54546320 54546653 -40725998 + Lx9 LINE L1 5238 5603 -694 5 1001 1475 228 51 76 chr17 54546696 54547090 -40725561 + ORR1C2 LTR MaLR 1 384 0 5 1001 2686 269 182 34 chr17 54547090 54548238 -40724413 + Lx9 LINE L1 5602 6924 -720 5 1001 498 17 0 0 chr17 54548238 54548297 -40724354 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 5 1001 1114 59 0 0 chr17 54548297 54548433 -40724218 - B1_Mm SINE Alu -10 137 2 5 1001 2686 277 111 37 chr17 54548433 54548553 -40724098 + Lx9 LINE L1 6925 7049 -595 5 1001 230 308 54 36 chr17 54548553 54548664 -40723987 + RMER12 LTR ERVK 730 842 -480 5 1001 770 250 144 9 chr17 54548703 54548925 -40723726 - Lx9 LINE L1 -243 7401 7150 5 1001 432 253 61 153 chr17 54548925 54549100 -40723551 - MMAR1 DNA Mariner -89 1197 1036 5 1001 7075 45 1 8 chr17 54549100 54549984 -40722667 + L1Md_F2 LINE L1 5693 6570 -12 5 1001 432 253 61 153 chr17 54549984 54550004 -40722647 - MMAR1 DNA Mariner -251 1035 1020 5 1001 353 297 0 29 chr17 54550050 54550147 -40722504 - MMAR1 DNA Mariner -252 1034 941 5 1001 291 28 0 0 chr17 54550147 54550183 -40722468 + (CAA)n Simple_repeat Simple_repeat 1 36 0 6 1001 1722 290 62 57 chr17 54550188 54550902 -40721749 - MMAR1 DNA Mariner -542 744 28 5 1001 1170 33 0 7 chr17 54551261 54551412 -40721239 - L1Md_A LINE L1 0 6582 6433 6 1001 903 240 37 28 chr17 54551446 54551660 -40720991 + B3 SINE B2 1 216 0 6 1001 948 272 90 137 chr17 54552284 54552411 -40720240 + ORR1D2 LTR MaLR 1 89 -281 6 1001 7987 38 16 1 chr17 54552411 54553380 -40719271 + L1Md_F2 LINE L1 5587 6570 -12 6 1001 948 272 90 137 chr17 54553380 54553640 -40719011 + ORR1D2 LTR MaLR 90 370 0 6 1001 536 174 8 0 chr17 54554078 54554199 -40718452 + CT-rich Low_complexity Low_complexity 1 122 0 6 1001 213 39 0 0 chr17 54554199 54554225 -40718426 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 1001 192 77 0 0 chr17 54554595 54554621 -40718030 + (CAAG)n Simple_repeat Simple_repeat 2 27 0 6 1001 24 0 0 0 chr17 54554804 54554828 -40717823 + AT_rich Low_complexity Low_complexity 1 24 0 6 1001 450 122 54 0 chr17 54555831 54555905 -40716746 - ORR1D1 LTR MaLR 0 384 307 6 1001 647 306 32 16 chr17 54555896 54556072 -40716579 - ORR1D1 LTR MaLR -181 193 15 6 1001 804 215 139 17 chr17 54556072 54556309 -40716342 - ORR1D1-int LTR MaLR 0 1509 1244 6 1001 2855 169 45 18 chr17 54556309 54556881 -40715770 + Lx3C LINE L1 757 1344 -5640 7 1001 10899 124 84 8 chr17 54556881 54557764 -40714887 + Lx3C LINE L1 3095 4117 -1769 7 1001 243 0 0 0 chr17 54557764 54557791 -40714860 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1001 10899 124 84 8 chr17 54557791 54558918 -40713733 + Lx3C LINE L1 4118 5260 -626 7 1001 8273 130 16 11 chr17 54560579 54561348 -40711303 + Lx3C LINE L1 5246 6023 -953 7 1001 1174 68 0 0 chr17 54561348 54561494 -40711157 + B1_Mm SINE Alu 2 147 0 7 1001 8273 127 10 16 chr17 54561494 54562446 -40710205 + Lx3C LINE L1 6024 6968 -8 7 1001 386 84 28 0 chr17 54562466 54562537 -40710114 + (CAGAGA)n Simple_repeat Simple_repeat 4 76 0 7 1001 1734 257 149 39 chr17 54562540 54563028 -40709623 - ORR1D1-int LTR MaLR -233 1137 596 6 1001 4572 141 34 8 chr17 54563028 54563791 -40708860 - Lx LINE L1 -6 6648 5866 7 1001 429 310 7 60 chr17 54563791 54563837 -40708814 - ORR1D1-int LTR MaLR -775 595 552 6 1001 21161 38 0 0 chr17 54564182 54566891 -40705760 - L1_Mm LINE L1 -1151 4732 2024 7 1001 766 215 55 23 chr17 54567051 54567270 -40705381 - URR1A DNA MER1_type 0 226 1 7 1001 543 219 42 16 chr17 54568871 54569006 -40703645 + MTD LTR MaLR 14 146 -261 7 1001 523 172 33 33 chr17 54569039 54569159 -40703492 + MTD LTR MaLR 285 404 -17 7 1001 8136 83 12 37 chr17 54570430 54571785 -40700866 + Lx3A LINE L1 4815 6151 -830 7 1001 4464 171 73 8 chr17 54571785 54572638 -40700013 - RMER13B LTR ERVK 0 908 1 7 1001 8136 116 31 18 chr17 54572638 54573468 -40699183 + Lx3A LINE L1 6152 6978 -3 7 1001 326 277 10 0 chr17 54573547 54573648 -40699003 - Lx9 LINE L1 -178 7466 7365 8 1001 3564 135 48 85 chr17 54573808 54574583 -40698068 + RMER17A LTR ERVK 1 746 -5 8 1001 381 43 0 0 chr17 54574929 54574976 -40697675 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 1001 26 64 0 0 chr17 54575144 54575191 -40697460 + AT_rich Low_complexity Low_complexity 1 47 0 8 1001 263 340 0 0 chr17 54575856 54575953 -40696698 + (TGGA)n Simple_repeat Simple_repeat 1 97 0 8 1001 519 78 0 0 chr17 54575961 54576038 -40696613 + (TG)n Simple_repeat Simple_repeat 2 78 0 8 1001 1317 309 75 45 chr17 54576200 54576716 -40695935 + Lx8 LINE L1 6673 7220 -253 8 1001 369 0 0 0 chr17 54576716 54576757 -40695894 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 1001 486 0 0 0 chr17 54576757 54576810 -40695841 + (GA)n Simple_repeat Simple_repeat 2 55 0 8 1001 1317 309 75 45 chr17 54576810 54577068 -40695583 + Lx8 LINE L1 7221 7470 -3 8 1001 243 214 0 0 chr17 54578868 54578938 -40693713 + (TA)n Simple_repeat Simple_repeat 2 71 0 8 1001 217 302 0 0 chr17 54579576 54579639 -40693012 + CT-rich Low_complexity Low_complexity 4 66 0 9 1001 505 320 40 0 chr17 54579857 54580032 -40692619 - LTR87 LTR ERVL? -211 413 232 9 1001 413 51 0 0 chr17 54580050 54580109 -40692542 - L1_Mus2 LINE L1 0 6566 6508 9 1001 2562 160 4 13 chr17 54580481 54580931 -40691720 + RLTR11B LTR ERVK 8 453 0 9 1001 459 231 28 19 chr17 54581347 54581453 -40691198 + RLTR23 LTR ERV1 324 430 0 9 1001 22 0 0 0 chr17 54581519 54581541 -40691110 + AT_rich Low_complexity Low_complexity 1 22 0 9 1001 867 334 50 27 chr17 54581598 54581936 -40690715 + ORR1E LTR MaLR 14 359 0 9 1001 1490 316 19 7 chr17 54581936 54582400 -40690251 + ORR1E-int LTR MaLR 12 481 -1099 9 1001 389 295 9 9 chr17 54582571 54582677 -40689974 + PB1D10 SINE Alu 1 106 -11 9 1001 2606 43 9 0 chr17 54582727 54583049 -40689602 + L1Md_F3 LINE L1 6259 6583 -1 9 1001 228 241 0 0 chr17 54583256 54583314 -40689337 + (TG)n Simple_repeat Simple_repeat 2 59 0 9 1001 358 268 29 7 chr17 54583435 54583574 -40689077 + L1M3 LINE L1 5290 5431 -740 1 1001 1068 58 0 7 chr17 54583819 54583958 -40688693 - B1_Mus1 SINE Alu 0 148 11 1 1001 1233 82 0 0 chr17 54584198 54584369 -40688282 + (TTC)n Simple_repeat Simple_repeat 3 173 0 1 1001 452 122 12 0 chr17 54584376 54584458 -40688193 + (TCC)n Simple_repeat Simple_repeat 3 85 0 1 1001 30 0 0 0 chr17 54584785 54584815 -40687836 + AT_rich Low_complexity Low_complexity 1 30 0 1 1001 25 51 0 0 chr17 54584976 54585015 -40687636 + AT_rich Low_complexity Low_complexity 1 39 0 1 1001 4898 262 50 18 chr17 54585235 54586648 -40686003 - Lx6 LINE L1 -2 7458 6001 1 1001 4796 177 37 33 chr17 54586657 54587813 -40684838 - L1_Mur3 LINE L1 -1828 4052 2892 1 1001 629 197 41 0 chr17 54587811 54587958 -40684693 - L1_Mur2 LINE L1 -4458 1419 1267 1 1001 819 217 22 26 chr17 54587980 54588207 -40684444 - L1_Mur3 LINE L1 -2999 2881 2656 1 1001 200 200 18 0 chr17 54588295 54588350 -40684301 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1001 2265 265 128 40 chr17 54588361 54589140 -40683511 + RMER13A LTR ERVK 13 860 0 1 1001 3880 264 39 24 chr17 54589166 54590361 -40682290 - Lx9 LINE L1 -127 7517 6306 1 1001 351 219 0 24 chr17 54590378 54590462 -40682189 - L1_Rod LINE L1 -321 5526 5445 1 1001 2807 74 17 30 chr17 54590468 54590874 -40681777 - MTB_Mm LTR MaLR -6 401 1 1 1001 505 237 31 19 chr17 54590874 54591033 -40681618 - L1_Rod LINE L1 -392 5455 5295 1 1001 249 322 25 0 chr17 54591058 54591176 -40681475 + L1_Mur3 LINE L1 84 204 -7508 1 1001 1533 211 86 24 chr17 54591254 54591788 -40680863 - L1_Rod LINE L1 -538 5309 4743 1 1001 333 0 0 0 chr17 54591909 54591946 -40680705 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1001 397 217 22 65 chr17 54591948 54592086 -40680565 - L1_Rod LINE L1 -3129 2718 2587 1 1001 3851 215 111 18 chr17 54592116 54592220 -40680431 - Lx5 LINE L1 -3 7047 6921 1 1001 3620 64 0 111 chr17 54592220 54592786 -40679865 - RLTR1C LTR ERV1 0 503 1 1 1001 3851 215 111 18 chr17 54592786 54593677 -40678974 - Lx5 LINE L1 -130 6920 5959 1 1001 3602 221 56 19 chr17 54593674 54595460 -40677191 - L1_Rod LINE L1 -3300 2547 695 1 1001 180 0 0 0 chr17 54595526 54595546 -40677105 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 1001 1480 282 84 6 chr17 54595556 54596102 -40676549 - L1_Rod LINE L1 -6502 670 82 1 1001 235 364 90 9 chr17 54596108 54596330 -40676321 - L1_Rod LINE L1 -6861 311 72 1 1001 472 247 0 0 chr17 54597184 54597277 -40675374 + PB1D10 SINE Alu 10 102 -15 1 1001 1692 240 98 28 chr17 54597305 54597815 -40674836 - RLTR20B3 LTR ERVK -1 576 31 1 1001 189 74 0 0 chr17 54597983 54598010 -40674641 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1001 1625 239 27 25 chr17 54598121 54598486 -40674165 - MTD LTR MaLR -11 408 43 1 1001 284 329 13 0 chr17 54598541 54598620 -40674031 + ID4_ SINE ID 1 80 -3 1 1001 207 179 0 0 chr17 54598934 54598973 -40673678 + T-rich Low_complexity Low_complexity 2 40 0 1 1001 244 308 15 0 chr17 54599189 54599254 -40673397 - MER33 DNA MER1_type -244 80 15 1 1001 843 202 0 105 chr17 54599833 54600043 -40672608 + ORR1C2 LTR MaLR 7 194 -190 1 1001 238 271 22 76 chr17 54599988 54600080 -40672571 + LTR48 LTR ERV1 70 156 -631 1 1001 1001 205 17 51 chr17 54600097 54600333 -40672318 + ORR1C2 LTR MaLR 157 384 0 1 1001 1363 231 72 0 chr17 54601060 54601393 -40671258 - Lx9 LINE L1 -634 7010 6654 1 1001 1277 254 69 43 chr17 54601432 54601795 -40670856 + Lx9 LINE L1 7059 7424 -220 1 1001 1103 100 0 11 chr17 54601795 54601977 -40670674 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 1001 1277 254 69 43 chr17 54601977 54602078 -40670573 + Lx9 LINE L1 7425 7535 -109 1 1001 209 30 0 57 chr17 54602694 54602729 -40669922 + (TAAAA)n Simple_repeat Simple_repeat 5 37 0 1 1001 336 313 85 6 chr17 54602749 54602913 -40669738 - MER2 DNA MER2_type -45 300 124 1 1001 2160 225 121 5 chr17 54603515 54604175 -40668476 + Lx9 LINE L1 6902 7638 -6 1 1001 492 267 62 10 chr17 54604261 54604469 -40668182 + Lx7 LINE L1 5611 5829 -1867 1 1001 1347 210 17 0 chr17 54604662 54604962 -40667689 - RLTR40 LTR ERVK -492 325 21 1 1001 3426 20 5 2 chr17 54605531 54605926 -40666725 - MTA_Mm LTR MaLR 0 396 1 1 1001 1134 188 9 49 chr17 54606201 54606425 -40666226 - RLTR20B3 LTR ERVK 0 577 363 1 1001 6285 130 33 22 chr17 54606429 54607488 -40665163 - Lx2 LINE L1 -3 6994 5924 1 1001 1784 70 0 0 chr17 54607489 54607730 -40664921 + Lx LINE L1 5692 5932 -722 1 1001 1644 211 7 3 chr17 54607757 54608056 -40664595 - RLTR20B3 LTR ERVK -277 300 1 1 1001 760 330 60 7 chr17 54609738 54610019 -40662632 - MT2A LTR ERVL -10 523 228 1 1001 486 49 0 0 chr17 54611007 54611068 -40661583 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 1001 385 279 19 19 chr17 54611536 54611642 -40661009 + MTE2b LTR MaLR 5 110 -269 1 1001 195 42 0 0 chr17 54612346 54612370 -40660281 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1 1001 24 0 0 0 chr17 54613427 54613451 -40659200 + AT_rich Low_complexity Low_complexity 1 24 0 1 1001 737 105 13 19 chr17 54614044 54614199 -40658452 + (GAAA)n Simple_repeat Simple_repeat 2 155 0 1 1001 767 86 0 17 chr17 54614653 54614771 -40657880 + (GGA)n Simple_repeat Simple_repeat 3 118 0 1 1001 7762 92 7 6 chr17 54614810 54616264 -40656387 + L1_Mus3 LINE L1 5176 6630 -8 1 1001 414 0 0 0 chr17 54616299 54616345 -40656306 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 1 1001 3728 62 38 6 chr17 54616454 54616990 -40655661 + L1Md_F3 LINE L1 6054 6584 0 1 1001 424 237 52 0 chr17 54617215 54617312 -40655339 + RSINE1 SINE B4 3 104 -61 1 1001 382 163 77 24 chr17 54617763 54618019 -40654632 + (TA)n Simple_repeat Simple_repeat 1 269 0 1 1001 500 312 116 73 chr17 54618037 54618092 -40654559 - Lx9 LINE L1 -119 7525 7473 1 1001 225 0 0 0 chr17 54618092 54618117 -40654534 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1001 500 312 116 73 chr17 54618117 54618458 -40654193 - Lx9 LINE L1 -172 7472 7112 1 1001 34 79 0 0 chr17 54619021 54619097 -40653554 + AT_rich Low_complexity Low_complexity 1 76 0 1 1001 332 237 13 38 chr17 54620038 54620117 -40652534 + MLT2B4 LTR ERVL 1 77 -479 1 1001 23 0 0 0 chr17 54620674 54620697 -40651954 + AT_rich Low_complexity Low_complexity 1 23 0 1 1001 226 260 0 0 chr17 54620916 54620966 -40651685 - Lx9 LINE L1 -619 7025 6976 1 1001 1652 242 76 54 chr17 54620966 54621481 -40651170 + MT2A LTR ERVL 1 526 -7 1 1001 1187 272 103 11 chr17 54621484 54621844 -40650807 - Lx9 LINE L1 -664 6980 6588 1 1001 372 279 79 67 chr17 54621843 54622008 -40650643 + Lx9 LINE L1 7021 7187 -457 1 1001 734 186 27 33 chr17 54622008 54622158 -40650493 + B1_Mur2 SINE Alu 1 149 0 1 1001 888 261 69 35 chr17 54622218 54622508 -40650143 + Lx9 LINE L1 7173 7472 -172 1 1001 396 0 0 0 chr17 54622544 54622588 -40650063 + (TC)n Simple_repeat Simple_repeat 2 45 0 1 1001 267 31 0 0 chr17 54622588 54622619 -40650032 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1001 3955 144 65 111 chr17 54622868 54623814 -40648837 - RLTR13D6 LTR ERVK 0 902 1 1 1001 207 0 0 0 chr17 54623949 54623972 -40648679 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1001 21 36 0 0 chr17 54624515 54624543 -40648108 + AT_rich Low_complexity Low_complexity 1 28 0 1 1001 510 251 278 10 chr17 54625044 54625351 -40647300 - MTC LTR MaLR 0 421 33 1 1001 423 145 0 0 chr17 54625382 54625465 -40647186 + (CA)n Simple_repeat Simple_repeat 1 83 0 1 1001 1163 62 7 0 chr17 54628057 54628203 -40644448 + B1_Mm SINE Alu 1 147 0 1 1001 279 283 91 66 chr17 54628223 54628586 -40644065 - L1MD LINE L1 -1566 4580 4209 1 1001 438 246 38 76 chr17 54628586 54628771 -40643880 + HAL1-2a_MD LINE L1 2349 2526 -498 1 1001 625 264 0 0 chr17 54629027 54629171 -40643480 - B1_Mm SINE Alu -2 145 2 1 1001 42 0 0 0 chr17 54629203 54629245 -40643406 + AT_rich Low_complexity Low_complexity 1 42 0 1 1001 8420 142 23 14 chr17 54629245 54631290 -40641361 - Lx4A LINE L1 -2 7056 4987 1 1001 8735 114 31 1 chr17 54631291 54633362 -40639289 + L1_Mus3 LINE L1 4495 6626 -12 1 1001 3179 180 48 35 chr17 54633369 54633979 -40638672 - RLTR22_Mur LTR ERVK -263 1585 975 1 1001 882 36 0 0 chr17 54633987 54634097 -40638554 + (TCC)n Simple_repeat Simple_repeat 3 112 0 1 1001 1012 136 0 13 chr17 54634097 54634237 -40638414 - B1_Mus1 SINE Alu -8 140 1 1 1001 3179 180 48 35 chr17 54634237 54634317 -40638334 - RLTR22_Mur LTR ERVK -874 974 887 1 1001 559 182 20 0 chr17 54634315 54634414 -40638237 + B1_Mur4 SINE Alu 46 146 -4 1 1001 5033 68 3 9 chr17 54635584 54636256 -40636395 - L1_Mus3 LINE L1 0 6638 5971 1 1001 243 197 97 16 chr17 54636349 54636411 -40636240 - MLT1A LTR MaLR -25 349 283 1 1001 310 346 57 19 chr17 54636467 54636626 -40636025 - MLT1A LTR MaLR -204 170 6 1 1001 1714 208 33 3 chr17 54636626 54636993 -40635658 - ORR1C1 LTR MaLR 0 378 1 1 1001 348 321 0 0 chr17 54637411 54637495 -40635156 - PB1D7 SINE Alu -6 114 31 1 1001 22 0 0 0 chr17 54637713 54637735 -40634916 + AT_rich Low_complexity Low_complexity 1 22 0 1 1001 1845 242 68 72 chr17 54638572 54639141 -40633510 - RMER2 LTR ERV1 0 567 1 1 1001 675 67 0 0 chr17 54640319 54640408 -40632243 + (TTCCG)n Simple_repeat Simple_repeat 3 91 0 1 1001 1424 183 70 7 chr17 54643095 54643365 -40629286 + MTC LTR MaLR 3 289 -132 1 1001 2348 110 107 25 chr17 54643388 54643827 -40628824 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1001 6152 42 5 0 chr17 54643827 54644569 -40628082 - IAPEz-int LTR ERVK 0 6481 5736 1 1001 2169 69 4 0 chr17 54644568 54644845 -40627806 - IAPEz-int LTR ERVK -4845 1636 1359 1 1001 3407 58 22 16 chr17 54644845 54645411 -40627240 - IAPEz-int LTR ERVK -5819 662 168 1 1001 235 267 0 0 chr17 54645411 54645456 -40627195 - RLTR27 LTR ERVK -34 275 231 1 1001 253 118 0 0 chr17 54645458 54645492 -40627159 - IAPEz-int LTR ERVK -7323 258 225 1 1001 237 250 0 0 chr17 54645492 54645536 -40627115 - RLTR27 LTR ERVK -34 275 232 1 1001 822 105 0 9 chr17 54645539 54645654 -40626997 - IAPEz-int LTR ERVK -7323 258 145 1 1001 227 267 0 0 chr17 54645654 54645699 -40626952 - RLTR27 LTR ERVK -34 275 231 1 1001 489 113 0 228 chr17 54645699 54645848 -40626803 - IAPEz-int LTR ERVK -6358 123 9 1 1001 2294 117 107 25 chr17 54645849 54646288 -40626363 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1001 264 273 30 0 chr17 54647718 54647817 -40624834 + L1M3 LINE L1 4519 4620 -1520 1 1001 513 319 40 37 chr17 54647842 54648247 -40624404 + L1PB4 LINE L1 5443 5888 -268 1 1001 529 287 44 80 chr17 54648351 54648609 -40624042 - RMER17B LTR ERVK -9 899 644 1 1001 3455 133 194 94 chr17 54648609 54648907 -40623744 + RMER17A2 LTR ERVK 5 296 -610 1 1001 519 45 0 0 chr17 54648907 54648973 -40623678 + (TC)n Simple_repeat Simple_repeat 2 67 0 1 1001 3455 133 194 94 chr17 54648973 54649198 -40623453 + RMER17A2 LTR ERVK 297 652 -254 1 1001 510 17 0 0 chr17 54649198 54649257 -40623394 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 1001 3455 133 194 94 chr17 54649257 54649552 -40623099 + RMER17A2 LTR ERVK 653 905 -1 1 1001 529 282 8 104 chr17 54649552 54649754 -40622897 - RMER17B LTR ERVK -219 739 551 1 1001 3636 122 19 7 chr17 54649754 54650340 -40622311 + L1_Mm LINE L1 4335 4927 -956 1 1001 1535 123 12 0 chr17 54650326 54650570 -40622081 + L1_Mur2 LINE L1 4011 4257 -1620 1 1001 1398 150 189 4 chr17 54650669 54650950 -40621701 + ORR1A2 LTR MaLR 6 338 -8 1 1001 8008 165 71 15 chr17 54650992 54652551 -40620100 + ORR1A2-int LTR MaLR 11 1657 -135 1 1001 798 202 0 0 chr17 54652551 54652724 -40619927 + CT-rich Low_complexity Low_complexity 1 173 0 1 1001 198 0 0 0 chr17 54652724 54652746 -40619905 + (TTTC)n Simple_repeat Simple_repeat 1 22 0 2 1001 4364 125 61 3 chr17 54652751 54653456 -40619195 - Lx2 LINE L1 -13 6984 6239 2 1001 2114 139 18 33 chr17 54653457 54653937 -40618714 + ORR1A2 LTR MaLR 1 371 -13 1 1001 466 161 35 18 chr17 54655699 54655813 -40616838 + L1_Mur3 LINE L1 1657 1772 -4108 2 1001 216 97 0 0 chr17 54655831 54655862 -40616789 + (CCA)n Simple_repeat Simple_repeat 3 33 0 2 1001 3083 167 30 42 chr17 54655862 54656284 -40616367 + L1_Mur3 LINE L1 2072 2483 -3397 2 1001 724 219 29 0 chr17 54656284 54656421 -40616230 + B1_Mur3 SINE Alu 3 143 -6 2 1001 3083 167 30 42 chr17 54656421 54656686 -40615965 + L1_Mur3 LINE L1 2484 2754 -3126 2 1001 398 256 12 0 chr17 54656695 54656781 -40615870 + Lx7 LINE L1 6465 6551 -909 2 1001 226 279 69 11 chr17 54656779 54656866 -40615785 + Lx7 LINE L1 7250 7341 -355 2 1001 202 238 16 0 chr17 54656885 54656948 -40615703 + T-rich Low_complexity Low_complexity 1 64 0 2 125 2757 224 38 16 chr17 54656948 54657742 -40614909 - Lx4B LINE L1 -3 6997 6157 2 1002 321 26 0 0 chr17 54657796 54657834 -40614817 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1002 659 271 50 116 chr17 54657834 54657900 -40614751 + Lx7 LINE L1 7125 7187 -273 2 1002 1110 280 46 48 chr17 54657900 54658402 -40614249 + RLTR16 LTR ERVK 5 505 0 2 1002 784 233 19 54 chr17 54658402 54658653 -40613998 + Lx7 LINE L1 7188 7671 -25 2 1002 1309 82 15 5 chr17 54658653 54658850 -40613801 + L1_Mus3 LINE L1 6437 6635 -3 2 1002 354 261 155 19 chr17 54659084 54659291 -40613360 - L1MA5 LINE L1 -7 6293 6059 2 1002 277 317 8 40 chr17 54659564 54659689 -40612962 + Lx7 LINE L1 7571 7691 -5 2 1002 252 337 11 0 chr17 54659779 54659868 -40612783 - MLT1B LTR MaLR -229 161 72 2 1002 489 288 30 8 chr17 54660862 54660995 -40611656 + MER34A LTR ERV1 29 164 -407 2 1002 213 39 0 0 chr17 54661085 54661111 -40611540 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 1002 369 0 0 0 chr17 54661111 54661152 -40611499 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 2 1002 214 247 74 105 chr17 54661165 54661179 -40611472 - PB1D10 SINE Alu -11 106 95 2 1002 207 0 0 0 chr17 54661179 54661202 -40611449 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 1002 214 247 74 105 chr17 54661202 54661282 -40611369 - PB1D10 SINE Alu -23 94 15 2 1002 658 29 57 0 chr17 54661413 54661518 -40611133 + L1Md_F3 LINE L1 6472 6582 -2 2 1002 286 299 0 0 chr17 54662431 54662528 -40610123 + CT-rich Low_complexity Low_complexity 2 98 0 2 1002 27 29 0 0 chr17 54663285 54663319 -40609332 + AT_rich Low_complexity Low_complexity 1 34 0 2 1002 203 182 55 0 chr17 54663593 54663648 -40609003 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 2 1002 22 35 0 0 chr17 54663656 54663685 -40608966 + AT_rich Low_complexity Low_complexity 1 29 0 2 1002 401 314 92 54 chr17 54663816 54664289 -40608362 + L1_Mur2 LINE L1 1437 1914 -3966 2 1002 21 0 0 0 chr17 54664506 54664527 -40608124 + AT_rich Low_complexity Low_complexity 1 21 0 2 1002 648 232 51 0 chr17 54664528 54664666 -40607985 - B1_Mus1 SINE Alu -1 147 3 2 1002 842 317 99 32 chr17 54664706 54665978 -40606673 + L1_Mur2 LINE L1 2149 3517 -2360 2 1002 1527 33 16 5 chr17 54665978 54666163 -40606488 - B2_Mm1a SINE B2 -5 188 2 2 1002 842 315 119 21 chr17 54666163 54666223 -40606428 + L1_Mur2 LINE L1 3518 3575 -2302 2 1002 366 61 0 0 chr17 54666299 54666348 -40606303 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 2 1002 215 258 0 15 chr17 54666349 54666416 -40606235 + (TA)n Simple_repeat Simple_repeat 2 67 0 2 1002 210 91 0 0 chr17 54666420 54666453 -40606198 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1002 304 305 47 9 chr17 54666558 54666664 -40605987 + Lx8 LINE L1 6233 6342 -1131 2 1002 18817 21 0 0 chr17 54666661 54668950 -40603701 + L1Md_A LINE L1 3297 5586 -297 2 1002 8358 37 0 0 chr17 54668951 54669945 -40602706 + L1Md_A LINE L1 5588 6581 -1 2 1002 1555 316 63 43 chr17 54669959 54670818 -40601833 + Lx8 LINE L1 6351 7226 -247 2 1002 447 90 19 48 chr17 54670823 54670928 -40601723 + (CAGAGA)n Simple_repeat Simple_repeat 3 104 0 2 1002 21 89 0 0 chr17 54671129 54671185 -40601466 + AT_rich Low_complexity Low_complexity 1 56 0 2 1002 2713 74 89 0 chr17 54671389 54671794 -40600857 + L1_Mm LINE L1 2076 2516 -3367 2 1002 2599 51 3 12 chr17 54671795 54672130 -40600521 + L1_Mus2 LINE L1 6229 6560 -6 2 1002 1398 281 48 69 chr17 54672181 54672911 -40599740 + RMER19C LTR ERVK 9 611 0 2 1002 2340 254 74 5 chr17 54673983 54674593 -40598058 - Lx6 LINE L1 -3 7457 6806 2 1002 378 0 0 0 chr17 54674971 54675013 -40597638 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 1002 8091 23 0 0 chr17 54675107 54676361 -40596290 - L1Md_T LINE L1 -2 6580 5327 2 1002 624 13 0 0 chr17 54676358 54676433 -40596218 + L1_Mm LINE L1 4440 4514 -1369 2 1002 7108 22 5 0 chr17 54676434 54677307 -40595344 + L1_Mm LINE L1 4439 5315 -568 2 1002 1220 213 144 7 chr17 54678347 54678631 -40594020 + ORR1B2 LTR MaLR 1 323 -44 2 1002 676 165 14 50 chr17 54678648 54678788 -40593863 - B1_Mur3 SINE Alu -1 148 14 2 1002 328 195 30 137 chr17 54678678 54678809 -40593842 - MT2B LTR ERVL -324 277 161 2 1002 286 301 12 0 chr17 54679219 54679302 -40593349 - B1_Mur2 SINE Alu -41 108 25 2 1002 8824 128 13 0 chr17 54679334 54679832 -40592819 - Lx2A1 LINE L1 -3 7005 6505 2 1002 1055 102 0 7 chr17 54679832 54679980 -40592671 - B1_Mus1 SINE Alu -1 147 1 2 1002 8824 148 13 0 chr17 54679980 54681584 -40591067 - Lx2A1 LINE L1 -504 6504 4870 2 1002 4302 160 60 6 chr17 54681577 54682440 -40590211 - MusHAL1 LINE L1 -1104 1608 699 2 1002 210 91 0 0 chr17 54683242 54683275 -40589376 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 2 1002 37521 29 3 6 chr17 54685511 54691681 -40580970 - L1Md_T LINE L1 -1 6581 442 2 1002 7384 62 6 4 chr17 54691690 54692671 -40579980 - L1Md_F2 LINE L1 -12 6570 5588 2 1002 261 0 0 0 chr17 54692912 54692941 -40579710 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1002 744 94 0 0 chr17 54693377 54693483 -40579168 + (TTTC)n Simple_repeat Simple_repeat 3 108 0 2 1002 361 152 115 9 chr17 54693487 54693600 -40579051 - L1_Mur3 LINE L1 -6430 1282 1158 2 1002 5918 185 36 19 chr17 54693624 54694841 -40577810 - Lx4B LINE L1 -4 7054 5817 2 1002 4809 33 0 10 chr17 54694844 54695421 -40577230 - L1Md_T LINE L1 -1 6581 6011 2 1002 471 113 0 0 chr17 54695423 54695494 -40577157 + (TCCC)n Simple_repeat Simple_repeat 4 74 0 2 1002 808 292 9 9 chr17 54695510 54695721 -40576930 - B3 SINE B2 0 216 6 2 1002 180 0 0 0 chr17 54695798 54695818 -40576833 + (TTTTC)n Simple_repeat Simple_repeat 5 24 0 2 1002 412 298 103 7 chr17 54696037 54696318 -40576333 - L1MA5A LINE L1 -470 5827 5520 2 1002 2091 239 73 70 chr17 54696347 54696639 -40576012 - Lx9 LINE L1 -32 7612 7296 2 1002 351 44 0 0 chr17 54696639 54696684 -40575967 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1002 2091 239 73 70 chr17 54696684 54697196 -40575455 - Lx9 LINE L1 -349 7295 6805 2 1002 837 301 13 5 chr17 54697573 54697797 -40574854 - RLTR16 LTR ERVK -279 226 1 2 1002 259 203 15 15 chr17 54697877 54697942 -40574709 + B4A SINE B4 1 65 -227 2 1002 3279 229 43 16 chr17 54697988 54698765 -40573886 + Lx5 LINE L1 6278 7047 -3 2 1002 678 78 0 0 chr17 54698907 54699009 -40573642 + (CACAC)n Simple_repeat Simple_repeat 1 102 0 2 1002 1195 277 60 54 chr17 54699191 54699825 -40572826 + L1_Mur3 LINE L1 5099 5736 -144 2 1002 1753 187 14 8 chr17 54700560 54700911 -40571740 - RLTR15 LTR ERVK -4 355 3 2 1002 664 304 59 30 chr17 54701100 54701337 -40571314 - MT2A LTR ERVL -135 398 155 2 1002 235 258 52 113 chr17 54701460 54701560 -40571091 - B1_Mus1 SINE Alu -5 115 21 2 1002 1652 266 50 18 chr17 54701560 54702048 -40570603 + RLTR16 LTR ERVK 1 487 -18 2 1002 296 302 83 35 chr17 54702119 54702263 -40570388 - MT2A LTR ERVL -362 171 21 2 1002 2574 178 38 2 chr17 54703509 54704011 -40568640 + L1VL4 LINE L1 186 705 -5597 2 1002 4043 186 15 39 chr17 54704045 54704476 -40568175 + Lx2 LINE L1 5025 5461 -422 2 1002 4407 61 0 5 chr17 54704476 54705033 -40567618 + L1Md_F2 LINE L1 6015 6568 -14 2 1002 6190 162 37 6 chr17 54705033 54706442 -40566209 + Lx2 LINE L1 5462 7004 -4 2 1002 231 297 59 10 chr17 54706832 54706934 -40565717 + L1MCa LINE L1 15 121 -6387 2 1002 615 268 42 58 chr17 54707137 54707343 -40565308 + ORR1C2 LTR MaLR 106 355 -29 2 1002 1522 248 54 18 chr17 54707363 54707749 -40564902 + RMER15 LTR ERVL 27 426 -149 2 1002 2046 165 45 8 chr17 54707750 54708128 -40564523 - ORR1B1 LTR MaLR -2 392 1 2 1002 710 328 25 21 chr17 54708163 54708406 -40564245 + RLTR16 LTR ERVK 1 244 -261 2 1002 591 15 0 0 chr17 54708491 54708559 -40564092 + (TC)n Simple_repeat Simple_repeat 2 69 0 2 1002 290 348 107 19 chr17 54708667 54708872 -40563779 + MER2 DNA MER2_type 21 243 -102 2 1002 1355 53 16 5 chr17 54709366 54709554 -40563097 - L1Md_F2 LINE L1 -2 6580 6391 2 1002 3132 14 0 0 chr17 54709554 54709922 -40562729 + L1_Mm LINE L1 5375 5742 -141 2 1002 2918 187 127 75 chr17 54709991 54710863 -40561788 + RLTR25B LTR ERVK 5 1028 0 2 1002 568 265 105 19 chr17 54711137 54711460 -40561191 + L1MCa LINE L1 2900 3250 -3071 2 1002 231 299 30 0 chr17 54711554 54711621 -40561030 - ID4_ SINE ID -13 70 2 2 1002 37141 35 0 0 chr17 54712214 54717627 -40555024 - L1Md_T LINE L1 0 6582 1170 2 1002 4296 147 29 35 chr17 54717633 54718538 -40554113 - L1Md_T LINE L1 -5411 1205 307 2 1002 455 331 94 4 chr17 54718547 54719023 -40553628 + L1MC2 LINE L1 5642 6160 -184 2 1002 756 94 0 0 chr17 54719100 54719228 -40553423 + (GAAA)n Simple_repeat Simple_repeat 3 130 0 2 1002 1085 214 152 7 chr17 54719251 54719528 -40553123 - ORR1D1 LTR MaLR -57 317 1 2 1002 7278 74 3 0 chr17 54719838 54720880 -40551771 + L1_Mus1 LINE L1 5523 6567 0 2 1002 8517 95 21 8 chr17 54721830 54723161 -40549490 + MusHAL1 LINE L1 15 1363 -1349 2 1002 1200 188 25 14 chr17 54723161 54723447 -40549204 - L1_Mur3 LINE L1 -3987 1893 1605 2 1002 303 308 130 24 chr17 54723572 54723662 -40548989 - RLTR20D LTR ERVK -1 577 478 2 1002 486 0 0 0 chr17 54723662 54723716 -40548935 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 1002 303 308 130 24 chr17 54723716 54723748 -40548903 - RLTR20D LTR ERVK -101 477 443 2 1002 479 248 86 133 chr17 54723782 54724061 -40548590 - RLTR20D LTR ERVK -282 269 1 2 1002 5026 157 88 40 chr17 54724069 54724792 -40547859 - MYSERV16_I-int LTR ERVK -2 2324 1564 2 1002 1050 89 7 14 chr17 54724792 54724940 -40547711 + B1_Mus1 SINE Alu 1 147 -1 2 1002 5026 157 88 40 chr17 54724940 54724979 -40547672 - MYSERV16_I-int LTR ERVK -763 1563 1563 2 1002 1265 68 0 11 chr17 54724979 54725157 -40547494 + (GAAA)n Simple_repeat Simple_repeat 4 179 0 2 1002 5026 157 88 40 chr17 54725157 54725351 -40547300 - MYSERV16_I-int LTR ERVK -763 1563 1357 2 1002 222 37 0 0 chr17 54725357 54725384 -40547267 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1002 1043 104 0 0 chr17 54725384 54725521 -40547130 - B1_Mus2 SINE Alu -8 139 3 3 1002 5026 157 88 40 chr17 54725521 54725780 -40546871 - MYSERV16_I-int LTR ERVK -970 1356 1051 2 1002 1717 209 142 58 chr17 54725770 54726755 -40545896 - MYSERV16_I-int LTR ERVK -1449 1393 1 2 1002 22 35 0 0 chr17 54727347 54727376 -40545275 + AT_rich Low_complexity Low_complexity 1 29 0 3 1002 391 346 90 48 chr17 54727649 54727742 -40544909 - RLTR20D LTR ERVK 0 568 477 3 1002 426 94 0 0 chr17 54727742 54727806 -40544845 + (CA)n Simple_repeat Simple_repeat 2 65 0 3 1002 391 346 90 48 chr17 54727806 54727879 -40544772 - RLTR20D LTR ERVK -98 480 396 3 1002 574 277 110 85 chr17 54727854 54728126 -40544525 - RLTR20D LTR ERVK -285 283 5 3 1002 601 224 156 17 chr17 54728126 54728299 -40544352 - Lx5 LINE L1 -52 6998 6802 3 1002 23919 162 14 14 chr17 54728286 54733963 -40538688 + Lx LINE L1 977 6646 -8 3 1002 1025 139 0 16 chr17 54733967 54734150 -40538501 + GA-rich Low_complexity Low_complexity 1 180 0 3 1002 215 125 25 0 chr17 54734163 54734203 -40538448 + (GGAA)n Simple_repeat Simple_repeat 2 42 0 3 1002 959 157 0 11 chr17 54734240 54734420 -40538231 + GA-rich Low_complexity Low_complexity 1 178 0 3 1002 468 0 0 0 chr17 54734422 54734474 -40538177 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 3 1002 329 333 134 13 chr17 54735007 54735238 -40537413 - MTE-int LTR MaLR -225 1355 1097 3 1002 622 161 161 0 chr17 54735261 54735398 -40537253 - ORR1B1 LTR MaLR -230 164 6 3 1002 423 56 0 0 chr17 54735403 54735457 -40537194 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1002 456 338 53 15 chr17 54735464 54735722 -40536929 - Lx9 LINE L1 -221 7423 7078 3 1002 344 358 26 7 chr17 54735784 54735936 -40536715 + LTR16A1 LTR ERVL 299 453 -3 3 1002 711 253 22 38 chr17 54736477 54736662 -40535989 + B2_Mm2 SINE B2 7 188 -7 3 1002 604 119 9 9 chr17 54736988 54737098 -40535553 + (TC)n Simple_repeat Simple_repeat 1 110 0 3 1002 392 279 108 7 chr17 54737836 54737984 -40534667 + L1M3 LINE L1 3984 4146 -1994 3 1002 249 303 166 3 chr17 54737977 54738272 -40534379 + L1MC LINE L1 2261 2603 -3543 3 1002 451 242 81 50 chr17 54738430 54738652 -40533999 + L1MC LINE L1 2791 3019 -3127 3 1002 423 0 0 0 chr17 54738672 54738719 -40533932 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1002 5053 53 13 22 chr17 54738745 54739415 -40533236 - L1Md_F2 LINE L1 0 6582 5919 3 1002 23 0 0 0 chr17 54739422 54739445 -40533206 + AT_rich Low_complexity Low_complexity 1 23 0 3 1002 10926 98 12 5 chr17 54739447 54741762 -40530889 - L1_Mus2 LINE L1 0 6566 4232 3 1002 2139 151 12 115 chr17 54742076 54742570 -40530081 + L1_Mm LINE L1 2705 3147 -2736 3 1002 5400 115 118 24 chr17 54742573 54743837 -40528814 - L1VL2 LINE L1 -1809 1806 375 3 1002 253 351 28 78 chr17 54744013 54744155 -40528496 - MLT1E2 LTR MaLR -127 500 366 3 1002 1575 108 0 13 chr17 54745407 54745641 -40527010 + ORR1A2 LTR MaLR 89 319 -8 3 1002 798 206 50 0 chr17 54745882 54746062 -40526589 - URR1A DNA MER1_type -3 223 35 3 1002 225 238 125 45 chr17 54746502 54746590 -40526061 + ORR1A4 LTR MaLR 220 314 -15 3 1002 790 29 0 0 chr17 54747230 54747335 -40525316 + L1Md_T LINE L1 6478 6582 0 3 1002 361 274 49 0 chr17 54747349 54747451 -40525200 + PB1D10 SINE Alu 1 107 -10 3 1002 377 238 69 10 chr17 54747730 54747832 -40524819 + PB1D10 SINE Alu 1 108 -9 3 1002 21 36 0 0 chr17 54748023 54748051 -40524600 + AT_rich Low_complexity Low_complexity 1 28 0 3 1002 708 290 131 12 chr17 54749090 54749418 -40523233 - ORR1D2 LTR MaLR -3 367 1 3 1002 310 397 82 14 chr17 54750104 54750385 -40522266 + L1M4b LINE L1 756 1055 -6279 3 1002 6039 95 40 12 chr17 54750433 54751340 -40521311 + Lx3_Mus LINE L1 6071 7002 -7 3 1002 246 309 78 61 chr17 54751344 54751589 -40521062 + L1M4b LINE L1 1119 1367 -5967 3 1002 349 355 55 86 chr17 54752379 54752866 -40519785 + L1M4b LINE L1 1693 2164 -5170 3 1002 323 279 85 18 chr17 54752909 54753073 -40519578 + L1M4b LINE L1 2282 2456 -4878 3 1002 3849 158 102 27 chr17 54753186 54754029 -40518622 + RMER17A2 LTR ERVK 1 906 0 3 1002 202 224 20 0 chr17 54754031 54754080 -40518571 + (CATATA)n Simple_repeat Simple_repeat 5 54 0 3 1002 392 289 142 19 chr17 54754144 54754250 -40518401 + B3 SINE B2 2 120 -96 3 1002 1913 157 76 128 chr17 54755037 54755482 -40517169 - RLTR23 LTR ERV1 -8 422 1 3 1002 1325 253 36 15 chr17 54755771 54756104 -40516547 + Lx3C LINE L1 6637 6976 0 3 1002 40 37 0 0 chr17 54756104 54756158 -40516493 + AT_rich Low_complexity Low_complexity 1 54 0 3 1002 865 283 74 0 chr17 54756805 54757049 -40515602 + MTD LTR MaLR 158 419 0 3 1002 225 0 0 0 chr17 54757265 54757290 -40515361 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 3 1002 347 91 0 29 chr17 54757715 54757783 -40514868 - Lx LINE L1 -4 6650 6585 3 1002 932 129 47 0 chr17 54757783 54757953 -40514698 - Lx2 LINE L1 -840 6157 5980 3 1002 6817 166 32 31 chr17 54757951 54759341 -40513310 - L1_Mm LINE L1 -828 5055 3665 3 1002 1703 211 25 34 chr17 54759333 54759769 -40512882 - L1_Mur3 LINE L1 -3170 2710 2279 3 1002 23 0 0 0 chr17 54759956 54759979 -40512672 + AT_rich Low_complexity Low_complexity 1 23 0 3 1002 534 315 55 22 chr17 54760044 54760226 -40512425 + B3A SINE B2 8 195 -3 3 1002 6502 70 46 8 chr17 54760896 54761791 -40510860 - RLTR13B3 LTR ERVK 0 929 1 3 1002 1628 201 82 3 chr17 54762144 54762509 -40510142 - ORR1B1 LTR MaLR 0 394 1 3 1002 2198 241 108 28 chr17 54762647 54763649 -40509002 + ORR1C1-int LTR MaLR 206 1365 -5 3 1002 395 294 147 18 chr17 54763649 54763703 -40508948 + ORR1C1 LTR MaLR 4 66 -312 3 1002 3316 116 74 6 chr17 54763703 54764231 -40508420 + LTRIS2 LTR ERV1 1 564 0 3 1002 395 294 147 18 chr17 54764231 54764339 -40508312 + ORR1C1 LTR MaLR 67 186 -192 3 1002 288 152 0 0 chr17 54764339 54764405 -40508246 + CT-rich Low_complexity Low_complexity 2 67 0 3 1002 373 200 36 91 chr17 54764426 54764536 -40508115 + ORR1C1 LTR MaLR 155 258 -126 3 1002 1166 263 88 3 chr17 54764532 54764849 -40507802 + MT2A LTR ERVL 190 533 0 3 1002 23 0 0 0 chr17 54765267 54765290 -40507361 + AT_rich Low_complexity Low_complexity 1 23 0 3 1002 392 258 16 0 chr17 54766957 54767085 -40505566 + (TATATG)n Simple_repeat Simple_repeat 3 132 0 3 1002 519 182 87 40 chr17 54767574 54767700 -40504951 - URR1B DNA MER1_type -7 218 87 3 1002 441 0 0 0 chr17 54768211 54768260 -40504391 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 1002 1317 94 17 0 chr17 54768260 54768440 -40504211 - B2_Mm2 SINE B2 -12 183 1 3 1002 238 0 0 0 chr17 54768545 54768580 -40504071 + L1_Mus2 LINE L1 6531 6565 -1 3 1002 324 0 0 0 chr17 54768591 54768627 -40504024 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 3 1002 1535 208 111 63 chr17 54769039 54769500 -40503151 - Lx5 LINE L1 -5 7045 6563 3 1002 541 283 114 46 chr17 54770828 54771265 -40501386 - L1MA6 LINE L1 -115 6185 5710 3 1002 258 322 161 76 chr17 54772569 54772818 -40499833 + MER21B LTR ERV1 289 558 -305 3 1002 26 30 0 0 chr17 54773471 54773504 -40499147 + AT_rich Low_complexity Low_complexity 1 33 0 3 1002 976 251 142 33 chr17 54774334 54774671 -40497980 - ORR1D1 LTR MaLR 0 374 1 3 1002 21 0 0 0 chr17 54775839 54775860 -40496791 + AT_rich Low_complexity Low_complexity 1 21 0 3 1002 1375 209 56 53 chr17 54776470 54776919 -40495732 - Lx7 LINE L1 0 7696 7247 3 1002 24 0 0 0 chr17 54778126 54778150 -40494501 + AT_rich Low_complexity Low_complexity 1 24 0 3 1002 30 89 0 0 chr17 54778507 54778586 -40494065 + AT_rich Low_complexity Low_complexity 1 79 0 3 1002 880 224 48 34 chr17 54779178 54779386 -40493265 - B3 SINE B2 -4 212 2 3 1002 450 114 0 0 chr17 54779709 54779779 -40492872 + (TCC)n Simple_repeat Simple_repeat 2 71 0 3 1002 275 360 87 14 chr17 54779853 54779991 -40492660 - B1F SINE Alu -1 148 1 3 1002 181 375 49 12 chr17 54780353 54780434 -40492217 - L2b LINE L2 -229 3146 3063 3 1002 225 192 90 64 chr17 54780445 54780523 -40492128 + Helitron1Na_Mam RC Helitron 631 710 -352 3 1002 187 281 125 0 chr17 54780532 54780596 -40492055 - L4 LINE RTE -502 1527 1456 3 1002 227 143 63 25 chr17 54781347 54781426 -40491225 + (TA)n Simple_repeat Simple_repeat 2 83 0 3 1002 428 288 8 16 chr17 54781715 54781842 -40490809 - Lx9 LINE L1 -468 7176 7051 3 1002 330 216 134 0 chr17 54781882 54781979 -40490672 - L1MA5A LINE L1 -380 5917 5808 3 1002 282 305 26 26 chr17 54781997 54782152 -40490499 + L1M1 LINE L1 5569 5723 -580 3 1002 713 171 0 0 chr17 54782177 54782300 -40490351 - Lx9 LINE L1 -615 7029 6907 3 1002 242 190 52 0 chr17 54782350 54782408 -40490243 + CT-rich Low_complexity Low_complexity 4 64 0 3 1002 297 246 55 16 chr17 54782458 54782586 -40490065 + Lx9 LINE L1 7511 7643 -1 3 125 29516 123 21 6 chr17 54782797 54789078 -40483573 + L1_Mus1 LINE L1 184 6564 -3 3 1003 652 239 102 19 chr17 54789118 54789416 -40483235 + L1MA4A LINE L1 5642 5972 -328 3 1003 3394 99 16 2 chr17 54789650 54790135 -40482516 - L1_Mus3 LINE L1 -1 6637 6146 3 1003 6812 131 9 6 chr17 54790135 54791234 -40481417 + L1_Mm LINE L1 4584 5686 -197 3 1003 24 0 0 0 chr17 54791234 54791258 -40481393 + AT_rich Low_complexity Low_complexity 1 24 0 3 1003 6769 175 20 14 chr17 54791647 54792892 -40479759 + RLTR21 LTR ERVK 3 1254 -318 3 1003 543 238 0 0 chr17 54792893 54793044 -40479607 + (TA)n Simple_repeat Simple_repeat 1 151 0 3 1003 413 237 18 97 chr17 54793050 54793187 -40479464 + RLTR21 LTR ERVK 1101 1253 -151 3 1003 414 0 0 0 chr17 54793188 54793234 -40479417 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1003 893 248 46 13 chr17 54793309 54793499 -40479152 + RLTR21 LTR ERVK 1097 1287 -285 3 1003 447 73 0 0 chr17 54793499 54793567 -40479084 + (TG)n Simple_repeat Simple_repeat 2 69 0 3 1003 893 248 46 13 chr17 54793567 54793613 -40479038 + RLTR21 LTR ERVK 1288 1341 -231 3 1003 442 263 40 0 chr17 54793617 54793716 -40478935 + RMER1A Other Other 1 103 -927 3 1003 1096 244 26 15 chr17 54793644 54793914 -40478737 - L1VL4 LINE L1 -5966 336 64 3 1003 455 263 72 7 chr17 54793917 54794055 -40478596 - MER44D DNA MER2_type -557 148 2 3 1003 1097 327 103 14 chr17 54794107 54794930 -40477721 - MER54A LTR ERVL -5 896 1 3 1003 1034 169 94 45 chr17 54794960 54795226 -40477425 + RLTR46 LTR ERVK 42 320 0 4 1003 216 0 0 0 chr17 54796475 54796499 -40476152 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 1003 1758 129 26 29 chr17 54796531 54796842 -40475809 + RLTR9A LTR ERVK 59 368 0 4 1003 204 387 40 8 chr17 54797117 54797242 -40475409 + L3b LINE CR1 331 459 -23 4 1003 291 241 38 0 chr17 54797830 54797909 -40474742 - RLTR23 LTR ERV1 0 430 349 4 1003 230 0 33 0 chr17 54798586 54798616 -40474035 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 4 1003 303 28 0 0 chr17 54798652 54798688 -40473963 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 4 1003 1300 85 6 0 chr17 54798927 54799103 -40473548 + B2_Mm1t SINE B2 1 177 -16 4 1003 600 14 0 0 chr17 54799105 54799174 -40473477 + (GAAAA)n Simple_repeat Simple_repeat 2 70 0 4 1003 1281 7 0 0 chr17 54799360 54799507 -40473144 - L1_Mm LINE L1 -1845 4038 3892 4 1003 6264 31 0 29 chr17 54799507 54800280 -40472371 + L1Md_T LINE L1 5832 6582 0 4 1003 5023 170 80 31 chr17 54800457 54801489 -40471162 + RLTR25A LTR ERVK 22 1103 0 4 1003 817 224 39 6 chr17 54801514 54801694 -40470957 - Lx9 LINE L1 -636 7008 6823 4 1003 2035 188 116 9 chr17 54802084 54802514 -40470137 - Lx9 LINE L1 -812 6832 6357 4 1003 593 292 55 85 chr17 54804533 54804901 -40467750 - RMER10A LTR ERVL -13 429 47 4 1003 1231 105 38 5 chr17 54804933 54805143 -40467508 + Lx3_Mus LINE L1 5997 6213 -796 4 1003 442 293 121 11 chr17 54805315 54805695 -40466956 + L1MC1 LINE L1 4905 5326 -820 4 1003 385 295 37 37 chr17 54805723 54805832 -40466819 + RSINE1 SINE B4 28 136 -29 4 1003 491 281 295 12 chr17 54806000 54806512 -40466139 + L1MC1 LINE L1 5591 6247 -97 4 1003 4441 190 52 8 chr17 54810597 54811450 -40461201 + RMER19B LTR ERVK 1 890 -12 4 1003 23 68 0 0 chr17 54811589 54811633 -40461018 + AT_rich Low_complexity Low_complexity 1 44 0 4 1003 1443 211 45 7 chr17 54811633 54811924 -40460727 - RMER5 LTR ERV1 0 534 233 4 1003 966 268 43 132 chr17 54811914 54812475 -40460176 - RLTR12B LTR ERVK -17 551 31 4 1003 1137 197 8 17 chr17 54812481 54812719 -40459932 - RMER5 LTR ERV1 -298 236 1 4 1003 288 0 0 0 chr17 54813410 54813442 -40459209 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 1003 255 161 0 0 chr17 54813442 54813498 -40459153 + (CCA)n Simple_repeat Simple_repeat 1 56 0 4 1003 226 147 29 0 chr17 54813496 54813564 -40459087 + A-rich Low_complexity Low_complexity 1 70 0 4 1003 1339 210 100 45 chr17 54813567 54813966 -40458685 - RMER5 LTR ERV1 -5 529 109 4 1003 472 177 77 0 chr17 54814099 54814231 -40458420 - L1_Mus3 LINE L1 -6 6632 6414 4 1003 320 106 0 21 chr17 54814369 54814417 -40458234 - L1Md_F2 LINE L1 -1168 4715 4669 4 1003 6617 56 42 0 chr17 54814419 54815270 -40457381 + L1Md_F2 LINE L1 4700 5586 -297 4 1003 7786 50 2 23 chr17 54815270 54816286 -40456365 + L1Md_F2 LINE L1 5587 6581 -1 4 1003 813 201 0 0 chr17 54816939 54817083 -40455568 - B1_Mur4 SINE Alu -5 145 2 4 1003 510 203 0 0 chr17 54817177 54817295 -40455356 + (TG)n Simple_repeat Simple_repeat 1 118 0 4 1003 25 51 0 0 chr17 54818513 54818552 -40454099 + AT_rich Low_complexity Low_complexity 1 39 0 4 1003 232 48 48 0 chr17 54818883 54818925 -40453726 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 4 1003 450 0 0 0 chr17 54820326 54820376 -40452275 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1003 476 206 0 30 chr17 54820798 54820898 -40451753 + MT2B LTR ERVL 15 111 -422 4 1003 2912 74 0 18 chr17 54820926 54821326 -40451325 - L1Md_F2 LINE L1 -10 6572 6180 4 1003 2489 74 6 0 chr17 54821326 54821649 -40451002 + L1Md_F2 LINE L1 5864 6188 -394 4 1003 1186 216 66 77 chr17 54821649 54822015 -40450636 + MT2B LTR ERVL 240 601 0 4 1003 626 262 0 14 chr17 54822176 54822323 -40450328 + B1_Mur2 SINE Alu 4 148 -1 4 1003 300 27 0 0 chr17 54823931 54823968 -40448683 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 1003 183 282 123 37 chr17 54825110 54825191 -40447460 - MIRb SINE MIR -146 122 35 4 1003 1016 177 5 5 chr17 54826055 54826248 -40446403 - Lx LINE L1 -13 6641 6449 4 1003 2298 116 138 32 chr17 54826257 54826693 -40445958 - RLTR45 LTR ERVK 0 482 1 4 1003 17839 180 59 33 chr17 54826693 54827220 -40445431 - MusHAL1 LINE L1 -536 5350 4836 4 1003 7935 53 0 3 chr17 54827220 54828210 -40444441 + L1Md_T LINE L1 5596 6582 0 4 1003 17839 180 59 33 chr17 54828210 54830216 -40442435 - MusHAL1 LINE L1 -1051 4835 2748 4 1003 6177 60 25 8 chr17 54830216 54830311 -40442340 - RLTR13D1 LTR ERVK 0 806 702 4 1003 378 0 0 0 chr17 54830311 54830353 -40442298 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1003 315 0 0 0 chr17 54830353 54830387 -40442264 + (GA)n Simple_repeat Simple_repeat 1 35 0 4 1003 6177 60 25 8 chr17 54830387 54831082 -40441569 - RLTR13D1 LTR ERVK -105 701 2 4 1003 17839 161 43 62 chr17 54831082 54833294 -40439357 - MusHAL1 LINE L1 -3139 2747 581 4 1003 577 131 15 0 chr17 54833712 54833842 -40438809 + (TC)n Simple_repeat Simple_repeat 1 132 0 4 1003 372 300 16 16 chr17 54835034 54835156 -40437495 + MLT1B LTR MaLR 266 387 -3 4 1003 340 55 36 0 chr17 54835858 54835913 -40436738 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 1003 1224 114 10 29 chr17 54837923 54838131 -40434520 + L1_Mus3 LINE L1 6433 6636 -2 4 1003 234 105 0 0 chr17 54838144 54838182 -40434469 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 4 1003 258 81 0 0 chr17 54838741 54838778 -40433873 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1003 33 0 0 0 chr17 54838908 54838941 -40433710 + AT_rich Low_complexity Low_complexity 1 33 0 4 1003 21 0 0 0 chr17 54839118 54839139 -40433512 + AT_rich Low_complexity Low_complexity 1 21 0 4 1003 4498 134 3 11 chr17 54841897 54842656 -40429995 - Lx3C LINE L1 -32 5854 5102 4 1003 5604 135 22 6 chr17 54842657 54843602 -40429049 + Lx3C LINE L1 5944 6903 -73 4 1003 3148 40 0 34 chr17 54844369 54844778 -40427873 - L1Md_F2 LINE L1 0 6582 6188 4 1003 4141 40 0 2 chr17 54844778 54845304 -40427347 + L1Md_A LINE L1 5654 6178 -404 4 1003 251 210 16 16 chr17 54845435 54845487 -40427164 + polypurine Low_complexity Low_complexity 2 52 0 4 1003 1530 17 0 0 chr17 54845487 54845664 -40426987 + (GGGAGA)n Simple_repeat Simple_repeat 4 180 0 4 1003 2500 126 33 17 chr17 54846866 54847286 -40425365 - RLTR13C2 LTR ERVK -112 696 270 4 1003 447 161 21 0 chr17 54848165 54848258 -40424393 - Lx2 LINE L1 -1 6996 6902 4 1003 1091 144 88 15 chr17 54848304 54848509 -40424142 - Lx2 LINE L1 -3 6994 6775 4 1003 2463 107 34 8 chr17 54848509 54848887 -40423764 - Lx2 LINE L1 -354 6643 6256 4 1003 29 47 0 0 chr17 54849312 54849355 -40423296 + AT_rich Low_complexity Low_complexity 1 43 0 4 1003 224 140 19 39 chr17 54849591 54849643 -40423008 + T-rich Low_complexity Low_complexity 2 52 0 4 1003 1485 211 75 9 chr17 54849690 54850039 -40422612 - ORR1D1 LTR MaLR 0 374 3 4 1003 353 59 20 0 chr17 54850165 54850216 -40422435 + MERVL-int LTR ERVL 5309 5360 -125 4 1003 391 167 46 35 chr17 54850216 54850303 -40422348 + ORR1A3-int LTR MaLR 553 640 -1323 4 1003 302 0 0 0 chr17 54850303 54850341 -40422310 + MERVL-int LTR ERVL 5448 5485 0 4 1003 1869 14 0 0 chr17 54850341 54850557 -40422094 + MT2_Mm LTR ERVL 1 216 -277 4 1003 675 0 0 0 chr17 54850815 54850890 -40421761 + (TTC)n Simple_repeat Simple_repeat 1 75 0 4 1003 633 200 12 12 chr17 54850890 54851052 -40421599 + C-rich Low_complexity Low_complexity 5 166 0 4 1003 2000 187 25 6 chr17 54851057 54851412 -40421239 - Lx4A LINE L1 -1 7057 6696 4 1003 1774 204 25 6 chr17 54851470 54851830 -40420821 - ORR1B2 LTR MaLR 0 367 1 4 1003 1798 225 18 184 chr17 54851938 54852667 -40419984 - RMER19C LTR ERVK -3 608 1 4 1003 437 304 76 45 chr17 54853936 54854160 -40418491 + RMER5 LTR ERV1 242 472 -62 4 1003 795 110 86 29 chr17 54855181 54855321 -40417330 + B1_Mus1 SINE Alu 1 148 0 4 1003 188 67 0 32 chr17 54855321 54855352 -40417299 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 4 1003 28485 101 13 2 chr17 54855379 54858900 -40413751 - L1_Mus1 LINE L1 0 6567 3015 4 1003 609 14 0 0 chr17 54858900 54858970 -40413681 + (TC)n Simple_repeat Simple_repeat 2 71 0 4 1003 28485 136 29 22 chr17 54858970 54861779 -40410872 - L1_Mus1 LINE L1 -2869 3014 177 4 1003 338 0 24 0 chr17 54862183 54862225 -40410426 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 1003 405 0 0 0 chr17 54862438 54862483 -40410168 + (TTATG)n Simple_repeat Simple_repeat 2 46 0 4 1003 1093 82 7 0 chr17 54862498 54862644 -40410007 - B1_Mus2 SINE Alu 0 147 1 4 1003 266 350 28 28 chr17 54863226 54863367 -40409284 + B1F SINE Alu 1 141 -8 4 1003 2422 128 18 3 chr17 54864381 54864771 -40407880 - L1_Mus4 LINE L1 0 6636 6241 4 1003 711 90 0 0 chr17 54865173 54865273 -40407378 + (GAAA)n Simple_repeat Simple_repeat 3 102 0 4 1003 518 51 25 25 chr17 54865331 54865411 -40407240 + ORR1B1 LTR MaLR 41 120 -274 4 1003 266 107 18 0 chr17 54866130 54866186 -40406465 + (TTTTTG)n Simple_repeat Simple_repeat 3 59 0 4 1003 920 170 0 0 chr17 54866259 54866406 -40406245 + B1_Mus1 SINE Alu 1 147 -1 4 1003 21 0 0 0 chr17 54866857 54866878 -40405773 + AT_rich Low_complexity Low_complexity 1 21 0 4 1003 411 21 0 0 chr17 54866882 54866930 -40405721 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 1003 610 163 0 30 chr17 54866957 54867058 -40405593 - B2_Mm2 SINE B2 -97 98 1 4 1003 470 330 5 40 chr17 54867092 54867294 -40405357 - B3A SINE B2 0 198 4 4 1003 317 189 84 9 chr17 54867737 54867844 -40404807 - Lx9 LINE L1 -1 7643 7529 4 1003 509 30 0 15 chr17 54867859 54867927 -40404724 + (TA)n Simple_repeat Simple_repeat 2 68 0 4 1003 395 219 31 20 chr17 54868422 54868520 -40404131 + RLTR23 LTR ERV1 332 430 0 4 1003 235 0 57 0 chr17 54868572 54868607 -40404044 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 4 1003 1996 186 53 12 chr17 54868648 54869068 -40403583 + RLTR16 LTR ERVK 1 499 -69 4 1003 373 290 66 51 chr17 54869214 54869410 -40403241 + RMER3D-int LTR ERVK 101 299 -2543 4 1003 327 133 195 26 chr17 54869552 54869629 -40403022 + RMER3D-int LTR ERVK 1022 1111 -1731 4 1003 608 236 48 66 chr17 54869882 54870154 -40402497 + RMER3D-int LTR ERVK 1112 1378 -1464 4 1003 1788 240 63 51 chr17 54870163 54870461 -40402190 + MYSERV16_I-int LTR ERVK 277 605 -1721 4 1003 1129 70 0 0 chr17 54870461 54870603 -40402048 + B1_Mm SINE Alu 1 142 -5 4 1003 423 0 0 0 chr17 54870608 54870655 -40401996 + (TAA)n Simple_repeat Simple_repeat 2 48 0 4 1003 1788 223 34 59 chr17 54870655 54871153 -40401498 + MYSERV16_I-int LTR ERVK 610 933 -1393 4 1003 3394 173 80 16 chr17 54871151 54872011 -40400640 + MYSERV16_I-int LTR ERVK 1404 2318 -8 4 1003 1412 218 45 7 chr17 54872019 54872305 -40400346 + RLTR16 LTR ERVK 1 297 -208 4 1003 405 322 59 38 chr17 54872517 54872804 -40399847 + MMERGLN-int LTR ERV1 2079 2371 -5230 4 1003 934 359 33 49 chr17 54873137 54874259 -40398392 + MMERGLN-int LTR ERV1 2783 3886 -3670 4 1003 21641 153 18 89 chr17 54875020 54879739 -40392912 + L1_Mus3 LINE L1 492 4794 -1089 4 1003 6514 38 3 1 chr17 54879739 54880522 -40392129 + L1Md_F2 LINE L1 5787 6570 -12 5 1003 21641 144 15 100 chr17 54880522 54881513 -40391138 + L1_Mus3 LINE L1 4795 5782 -101 4 1003 9871 56 3 1 chr17 54881511 54883537 -40389114 - L1Md_F3 LINE L1 -2 6582 4552 5 1003 886 94 162 0 chr17 54883530 54883690 -40388961 + L1_Mus3 LINE L1 5762 5947 -691 4 1003 3430 85 6 2 chr17 54883690 54884172 -40388479 + L1_Mus3 LINE L1 6154 6637 -1 4 1003 564 220 23 0 chr17 54884208 54884340 -40388311 + MMERGLN-int LTR ERV1 5094 5228 -2378 4 1003 406 345 0 6 chr17 54885317 54885492 -40387159 + RLTR4_MM-int LTR ERV1 7111 7284 -317 5 1003 305 318 55 48 chr17 54886150 54886315 -40386336 + RLTR23 LTR ERV1 265 430 0 5 1003 2299 221 125 12 chr17 54886319 54887086 -40385565 - Lx9 LINE L1 -203 7441 6588 5 1003 4332 205 16 72 chr17 54887164 54888253 -40384398 + RLTR25B LTR ERVK 1 1028 0 5 1003 2209 283 26 9 chr17 54889268 54889914 -40382737 + L1_Rod LINE L1 510 1166 -6442 5 1003 4505 219 51 84 chr17 54889926 54890148 -40382503 + L1_Rod LINE L1 1215 1436 -4411 5 1003 243 0 0 0 chr17 54890148 54890175 -40382476 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1003 4505 219 51 84 chr17 54890175 54891257 -40381394 + L1_Rod LINE L1 1437 2480 -3367 5 1003 398 50 0 32 chr17 54891257 54891319 -40381332 + (CAAA)n Simple_repeat Simple_repeat 2 61 0 5 1003 4505 219 51 84 chr17 54891319 54891494 -40381157 + L1_Rod LINE L1 2481 2645 -3202 5 1003 21 57 0 0 chr17 54891970 54892005 -40380646 + AT_rich Low_complexity Low_complexity 1 35 0 5 1003 21 36 0 0 chr17 54892044 54892072 -40380579 + AT_rich Low_complexity Low_complexity 1 28 0 5 1003 278 339 119 27 chr17 54892547 54892732 -40379919 + MER2 DNA MER2_type 1 202 -143 5 1003 378 0 0 0 chr17 54894463 54894505 -40378146 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1003 1215 214 51 79 chr17 54894513 54894785 -40377866 + ORR1C2 LTR MaLR 71 336 -48 5 1003 2549 106 30 13 chr17 54894785 54895178 -40377473 - MTB LTR MaLR 0 400 1 5 1003 1215 214 51 79 chr17 54895178 54895220 -40377431 + ORR1C2 LTR MaLR 337 376 -8 5 1003 1161 171 61 86 chr17 54896960 54897273 -40375378 + RLTR25B LTR ERVK 340 644 -384 5 1003 3826 130 11 14 chr17 54897276 54897907 -40374744 - L1_Mus4 LINE L1 -9 6627 5999 5 1003 911 104 0 0 chr17 54897910 54898035 -40374616 - B1_Mus1 SINE Alu -23 125 1 5 1003 4502 125 3 1 chr17 54898035 54898869 -40373782 - L1_Mus4 LINE L1 -627 6011 5177 5 1003 2992 18 2 125 chr17 54898880 54899320 -40373331 + RLTR10 LTR ERVK 1 386 -4 5 1003 14392 25 57 84 chr17 54899334 54901332 -40371319 + RLTR10-int LTR ERVK 41 1984 -3 5 1003 2828 26 18 155 chr17 54901334 54901786 -40370865 + RLTR10 LTR ERVK 1 390 0 5 1003 20390 176 23 9 chr17 54901790 54906250 -40366401 - L1_Mus4 LINE L1 -730 5153 612 5 1003 958 165 34 11 chr17 54906254 54906432 -40366219 + RLTR25B LTR ERVK 699 880 -223 5 1003 313 167 181 0 chr17 54906457 54906529 -40366122 + HAL1-3A_ME LINE L1 1977 2061 -797 5 1003 370 305 90 32 chr17 54906887 54907188 -40365463 - L1_Mur3 LINE L1 -801 5046 4763 5 1003 474 102 33 17 chr17 54907229 54907349 -40365302 + T-rich Low_complexity Low_complexity 5 126 0 5 1003 1773 314 70 41 chr17 54907349 54908992 -40363659 - L1_Mur3 LINE L1 -1514 4366 2674 5 1003 3876 207 35 33 chr17 54908992 54909898 -40362753 - RMER13B LTR ERVK 0 908 1 5 1003 1773 314 70 41 chr17 54909898 54909922 -40362729 - L1_Mur3 LINE L1 -3207 2673 2651 5 1003 28701 118 10 14 chr17 54910209 54914861 -40357790 - L1_Mus2 LINE L1 0 6566 1931 5 1003 3387 35 0 0 chr17 54914861 54915257 -40357394 - MTA_Mm LTR MaLR 0 396 1 5 1003 28701 162 25 52 chr17 54915257 54916903 -40355748 - L1_Mus2 LINE L1 -3953 1930 334 5 1003 295 278 35 9 chr17 54916894 54917010 -40355641 - L1VL2 LINE L1 -6139 196 78 5 1003 291 174 817 0 chr17 54917493 54917624 -40355027 - ORR1D1 LTR MaLR -6 368 131 5 1003 1399 48 0 5 chr17 54918186 54918374 -40354277 - L1Md_F2 LINE L1 -2 6580 6394 5 1003 331 291 47 107 chr17 54918539 54918689 -40353962 - B1F SINE Alu 0 149 9 5 1003 1439 176 27 0 chr17 54918751 54919013 -40353638 - ORR1A2 LTR MaLR -58 269 1 5 1004 3274 134 13 21 chr17 54919402 54920024 -40352627 - L1_Mur1 LINE L1 -470 5377 4792 5 1004 543 289 45 19 chr17 54920025 54920180 -40352471 + MTD LTR MaLR 247 405 -14 5 1004 1112 311 32 9 chr17 54920438 54920607 -40352044 + ORR1D2 LTR MaLR 1 174 -196 5 1004 204 40 0 0 chr17 54920607 54920632 -40352019 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 1004 1112 311 32 9 chr17 54920632 54920809 -40351842 + ORR1D2 LTR MaLR 175 354 -16 5 1004 712 330 40 81 chr17 54922051 54922186 -40350465 + MTD LTR MaLR 110 238 -181 5 1004 432 37 0 0 chr17 54922186 54922240 -40350411 + (TATG)n Simple_repeat Simple_repeat 2 55 0 5 1004 712 330 40 81 chr17 54922240 54922427 -40350224 + MTD LTR MaLR 239 419 0 5 1004 26 50 0 0 chr17 54922831 54922871 -40349780 + AT_rich Low_complexity Low_complexity 1 40 0 5 1004 387 60 0 0 chr17 54922880 54922930 -40349721 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 1004 1029 254 43 65 chr17 54923321 54923839 -40348812 - RMER19C LTR ERVK -169 442 1 5 1004 12296 183 50 61 chr17 54923839 54925001 -40347650 + Lx5 LINE L1 2915 4062 -1815 5 1004 765 0 0 0 chr17 54925001 54925086 -40347565 + (TC)n Simple_repeat Simple_repeat 2 86 0 5 1004 12296 183 50 61 chr17 54925086 54926110 -40346541 + Lx5 LINE L1 4063 5144 -733 5 1004 598 84 0 0 chr17 54926110 54926193 -40346458 + B1_Mus2 SINE Alu 63 145 -2 5 1004 297 0 0 0 chr17 54926193 54926226 -40346425 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 5 1004 12296 216 63 87 chr17 54926226 54927801 -40344850 + Lx5 LINE L1 5145 6972 -78 5 1004 215 191 16 0 chr17 54927983 54928046 -40344605 + (TA)n Simple_repeat Simple_repeat 2 65 0 5 1004 816 299 160 51 chr17 54928070 54928732 -40343919 - Lx8 LINE L1 -30 7443 6710 5 1004 359 293 281 9 chr17 54928811 54929023 -40343628 - MTEb LTR MaLR -2 377 109 5 1004 190 238 33 111 chr17 54929573 54929663 -40342988 - L2a LINE L2 -10 3416 3334 5 1004 231 286 110 22 chr17 54930427 54930563 -40342088 + L1M4b LINE L1 2265 2412 -4922 5 1004 250 319 54 27 chr17 54930849 54930997 -40341654 + L1M4b LINE L1 3016 3167 -3839 5 1004 837 20 0 0 chr17 54931673 54931772 -40340879 + (CA)n Simple_repeat Simple_repeat 2 100 0 5 1004 25 31 0 0 chr17 54932030 54932062 -40340589 + AT_rich Low_complexity Low_complexity 1 32 0 5 1004 230 339 16 0 chr17 54934152 54934214 -40338437 + ID4_ SINE ID 7 69 -14 5 1004 351 0 0 0 chr17 54935127 54935166 -40337485 + (TC)n Simple_repeat Simple_repeat 2 40 0 5 1004 423 0 0 0 chr17 54935166 54935212 -40337439 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1004 408 20 0 0 chr17 54935389 54935438 -40337213 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1004 10569 175 48 11 chr17 54935920 54939044 -40333607 - Lx3C LINE L1 -6 6970 3428 5 1004 407 212 58 17 chr17 54939036 54939156 -40333495 - MusHAL1 LINE L1 -2574 780 656 5 1004 852 229 289 0 chr17 54940974 54941178 -40331473 + L1_Mur2 LINE L1 883 1087 -5999 5 1004 977 119 6 0 chr17 54941178 54941338 -40331313 + (GAAA)n Simple_repeat Simple_repeat 3 163 0 5 1004 5376 192 23 48 chr17 54941338 54942219 -40330432 + L1_Mur2 LINE L1 1088 2049 -3828 5 1004 546 16 0 0 chr17 54942219 54942282 -40330369 + (TC)n Simple_repeat Simple_repeat 1 63 0 5 1004 201 121 0 0 chr17 54942284 54942317 -40330334 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1004 5376 191 20 48 chr17 54942317 54942747 -40329904 + L1_Mur2 LINE L1 2050 2473 -3404 5 1004 6542 72 0 1 chr17 54942750 54943595 -40329056 + L1Md_F2 LINE L1 4744 5587 -296 5 1004 7665 49 33 2 chr17 54943596 54944560 -40328091 + L1Md_F2 LINE L1 5589 6582 0 5 1004 1852 167 45 0 chr17 54944565 54944918 -40327733 + L1_Mur2 LINE L1 2477 2845 -3032 5 1004 1793 303 34 23 chr17 54944922 54945564 -40327087 - RCHARR1 DNA MER1_type -323 651 3 5 1004 4735 41 0 0 chr17 54945564 54946128 -40326523 + L1Md_T LINE L1 6019 6582 0 5 1004 217 357 11 35 chr17 54947597 54947684 -40324967 - PB1D10 SINE Alu -30 87 3 5 1004 332 328 0 15 chr17 54948080 54948210 -40324441 + L1VL2 LINE L1 288 415 -5920 5 1004 264 191 0 0 chr17 54948185 54948232 -40324419 + L1VL2 LINE L1 131 177 -6158 5 1004 4556 147 76 25 chr17 54948232 54949773 -40322878 + L1VL2 LINE L1 27 1652 -1963 5 1004 17783 194 8 33 chr17 54949767 54950199 -40322452 - L1VL4 LINE L1 -717 5169 4737 5 1004 207 0 0 0 chr17 54950199 54950222 -40322429 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1004 17783 194 8 33 chr17 54950222 54950683 -40321968 - L1VL4 LINE L1 -1150 4736 4302 5 1004 3366 35 5 0 chr17 54950683 54951077 -40321574 + MTA_Mm LTR MaLR 1 396 0 5 1004 17783 194 8 33 chr17 54951077 54952567 -40320084 - L1VL4 LINE L1 -1585 4301 2879 5 1004 615 27 0 0 chr17 54952567 54952640 -40320011 + (TC)n Simple_repeat Simple_repeat 2 74 0 5 1004 17783 194 8 33 chr17 54952640 54953381 -40319270 - L1VL4 LINE L1 -3008 2878 2148 5 1004 4566 72 2 20 chr17 54953381 54953992 -40318659 - L1_Mus2 LINE L1 0 6566 5967 5 1004 17783 184 6 28 chr17 54953992 54955606 -40317045 - L1VL4 LINE L1 -3739 2147 545 5 1004 341 332 75 48 chr17 54955656 54955884 -40316767 - Lx8 LINE L1 -129 7344 7111 5 1004 1569 184 208 37 chr17 54955893 54956272 -40316379 - RLTR41 LTR ERV1 -2 444 1 5 1004 831 314 35 11 chr17 54956369 54956558 -40316093 - MuRRS4-int LTR ERV1 -72 7706 7514 5 1004 450 0 0 0 chr17 54956558 54956608 -40316043 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 1004 831 319 36 11 chr17 54956608 54956847 -40315804 - MuRRS4-int LTR ERV1 -265 7513 7328 5 1004 2301 324 61 55 chr17 54957086 54958389 -40314262 - MuRRS4-int LTR ERV1 -2012 5594 3042 5 1004 194 62 31 0 chr17 54958389 54958421 -40314230 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 5 1004 2301 317 59 53 chr17 54958421 54958998 -40313653 - MuRRS4-int LTR ERV1 -2022 3041 2455 5 1004 345 322 57 34 chr17 54959011 54959441 -40313210 - MuRRS4-int LTR ERV1 -4064 3492 3203 5 1004 818 325 30 49 chr17 54959428 54960165 -40312486 - MuRRS4-int LTR ERV1 -3382 1681 1305 5 1004 252 281 0 0 chr17 54960844 54960908 -40311743 - MuRRS4-int LTR ERV1 -6999 779 716 5 1004 258 32 0 0 chr17 54962396 54962427 -40310224 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1004 1033 223 9 5 chr17 54962729 54962941 -40309710 + URR1B DNA MER1_type 13 225 0 5 1004 212 180 0 21 chr17 54963730 54963836 -40308815 + (CAGAGA)n Simple_repeat Simple_repeat 1 103 0 5 1004 2808 132 0 13 chr17 54965214 54965673 -40306978 + Lx2 LINE L1 6545 6997 0 5 1004 322 324 13 26 chr17 54965718 54965870 -40306781 + GA-rich Low_complexity Low_complexity 3 152 0 5 1004 583 179 286 28 chr17 54966433 54966611 -40306040 + URR1A DNA MER1_type 1 224 -2 5 1004 248 316 88 39 chr17 54967185 54967287 -40305364 + PB1D9 SINE Alu 13 119 -1 5 1004 742 211 0 27 chr17 54967325 54967471 -40305180 + B1_Mm SINE Alu 3 144 -3 5 1004 713 117 8 0 chr17 54967471 54967599 -40305052 + (TAGA)n Simple_repeat Simple_repeat 4 132 0 5 1004 302 293 87 94 chr17 54968729 54969015 -40303636 - L1MEd LINE L1 -5103 1016 733 5 1004 33 25 0 0 chr17 54969083 54969123 -40303528 + AT_rich Low_complexity Low_complexity 1 40 0 5 1004 728 271 88 0 chr17 54969367 54969559 -40303092 + B3 SINE B2 1 209 -7 5 1004 268 338 15 0 chr17 54969687 54969755 -40302896 + B4 SINE B4 52 120 -172 5 1004 306 313 7 20 chr17 54969974 54970124 -40302527 + (CATA)n Simple_repeat Simple_repeat 3 150 0 5 1004 282 247 0 0 chr17 54970145 54970218 -40302433 + (CAGA)n Simple_repeat Simple_repeat 4 76 0 5 1004 3632 107 14 7 chr17 54970284 54970850 -40301801 - L1_Mur1 LINE L1 -1800 4086 3517 5 1004 6881 127 19 46 chr17 54970850 54970926 -40301725 + Lx3A LINE L1 5844 5914 -1067 5 1004 248 0 0 30 chr17 54970926 54970959 -40301692 + (CAA)n Simple_repeat Simple_repeat 2 33 0 5 1004 6881 127 19 46 chr17 54970959 54972047 -40300604 + Lx3A LINE L1 5915 6976 -5 5 1004 407 352 68 68 chr17 54972455 54972824 -40299827 - MLT1B LTR MaLR -7 383 15 5 1004 754 216 127 150 chr17 54973431 54973817 -40298834 + MTE2a LTR MaLR 1 377 -2 5 1004 855 0 61 0 chr17 54973978 54974093 -40298558 + (TTTCC)n Simple_repeat Simple_repeat 1 122 0 5 1004 309 234 0 88 chr17 54974097 54974289 -40298362 + C-rich Low_complexity Low_complexity 1 175 0 5 1004 994 30 0 29 chr17 54974321 54974457 -40298194 + (TTCCC)n Simple_repeat Simple_repeat 2 133 0 5 1004 265 370 0 10 chr17 54974486 54974587 -40298064 - PB1D10 SINE Alu -5 112 13 6 1004 2652 328 45 33 chr17 54976820 54977266 -40295385 - Lx8 LINE L1 0 7473 7021 6 1004 1436 28 50 11 chr17 54977266 54977445 -40295206 - B2_Mm1a SINE B2 -7 186 1 6 1004 2652 328 45 33 chr17 54977445 54977916 -40294735 - Lx8 LINE L1 -453 7020 6537 6 1004 847 288 127 15 chr17 54977916 54978247 -40294404 + ORR1D2 LTR MaLR 1 368 -2 6 1004 2652 328 45 33 chr17 54978247 54978537 -40294114 - Lx8 LINE L1 -937 6536 6250 6 1004 684 152 0 0 chr17 54978554 54978672 -40293979 + CT-rich Low_complexity Low_complexity 1 118 0 6 1004 1003 90 14 0 chr17 54978672 54978816 -40293835 - B1_Mus1 SINE Alu -2 146 1 6 1004 293 348 9 0 chr17 54979101 54979213 -40293438 - MLT1A0 LTR MaLR -2 363 251 6 1004 201 108 0 0 chr17 54979370 54979407 -40293244 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 6 1004 797 199 0 6 chr17 54979968 54980069 -40292582 + polypyrimidine Low_complexity Low_complexity 77 177 0 6 1004 1433 39 0 6 chr17 54980069 54980250 -40292401 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 1004 797 199 0 6 chr17 54980250 54980325 -40292326 + polypyrimidine Low_complexity Low_complexity 2 76 0 6 1004 21 0 0 0 chr17 54980371 54980392 -40292259 + AT_rich Low_complexity Low_complexity 1 21 0 6 1004 575 220 52 20 chr17 54981589 54981742 -40290909 - Lx7 LINE L1 0 7696 7539 6 1004 234 254 0 0 chr17 54981743 54981802 -40290849 + (CTATA)n Simple_repeat Simple_repeat 2 60 0 6 1004 345 19 36 18 chr17 54981867 54981922 -40290729 + (TA)n Simple_repeat Simple_repeat 1 56 0 6 1004 781 138 8 15 chr17 54982017 54982149 -40290502 + B2_Mm2 SINE B2 3 133 -62 6 1004 526 124 0 6 chr17 54982181 54982262 -40290389 + L1_Mur3 LINE L1 5535 5613 -273 6 1004 299 227 0 29 chr17 54982269 54982337 -40290314 + Lx7 LINE L1 7274 7339 -357 6 1004 349 165 21 0 chr17 54982394 54982491 -40290160 + (TA)n Simple_repeat Simple_repeat 2 100 0 6 1004 359 292 123 49 chr17 54983548 54983973 -40288678 + RLTR12B LTR ERVK 22 340 -19 6 1004 422 223 81 44 chr17 54984425 54984561 -40288090 - L1MA4 LINE L1 -371 5929 5789 6 1004 315 0 0 0 chr17 54984561 54984596 -40288055 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1004 207 0 0 0 chr17 54984596 54984618 -40288033 + (TA)n Simple_repeat Simple_repeat 1 23 0 6 1004 422 256 138 74 chr17 54984618 54984777 -40287874 - L1_Rod LINE L1 -126 5721 5548 6 1004 402 94 0 0 chr17 54984789 54984853 -40287798 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 6 1004 340 350 30 61 chr17 54985375 54985606 -40287045 - Lx8 LINE L1 -123 7350 7127 6 1004 541 272 132 11 chr17 54986365 54986547 -40286104 - ORR1D1 LTR MaLR 0 374 171 6 1004 26565 109 50 15 chr17 54986797 54989747 -40282904 - L1_Mur1 LINE L1 -74 5812 2794 6 1004 1208 61 0 0 chr17 54989747 54989894 -40282757 - B1_Mm SINE Alu 0 147 1 6 1004 26565 137 69 20 chr17 54989894 54992141 -40280510 - L1_Mur1 LINE L1 -3093 2793 18 6 1004 4236 184 36 89 chr17 54992141 54993214 -40279437 + RLTR21 LTR ERVK 555 1570 -2 6 1004 2647 153 97 32 chr17 54993255 54993783 -40278868 - Lx4B LINE L1 -1 7057 6496 6 1004 25 83 0 0 chr17 54995440 54995500 -40277151 + AT_rich Low_complexity Low_complexity 1 60 0 6 1004 201 39 0 0 chr17 54995775 54995801 -40276850 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 1004 333 0 0 0 chr17 54996434 54996471 -40276180 + (GA)n Simple_repeat Simple_repeat 2 38 0 6 1004 29 0 0 0 chr17 54996569 54996598 -40276053 + AT_rich Low_complexity Low_complexity 1 29 0 6 1004 467 284 42 23 chr17 54996676 54996892 -40275759 + L1MC3 LINE L1 5614 5833 -1952 6 1004 21 57 0 0 chr17 54996948 54996983 -40275668 + AT_rich Low_complexity Low_complexity 1 35 0 6 1004 5430 140 28 2 chr17 54996983 54997857 -40274794 - Lx3A LINE L1 -11 6970 6075 6 1004 2362 116 88 15 chr17 54997855 54998265 -40274386 + Lx3_Mus LINE L1 6569 7008 -1 6 1004 3238 191 5 10 chr17 54998267 54998308 -40274343 - RLTR21 LTR ERVK -995 577 535 6 1004 3817 103 49 131 chr17 54998308 54999123 -40273528 + RMER17A LTR ERVK 1 748 -3 6 1004 3238 191 5 10 chr17 54999123 54999659 -40272992 - RLTR21 LTR ERVK -1038 534 3 6 1004 750 156 214 16 chr17 54999656 54999838 -40272813 + URR1B DNA MER1_type 1 218 -7 6 1004 710 251 94 52 chr17 55000384 55000618 -40272033 + L1_Rod LINE L1 5051 5304 -543 1 1004 771 85 53 15 chr17 55000618 55000750 -40271901 + Lx LINE L1 6511 6647 -7 2 1004 710 251 94 52 chr17 55000750 55000843 -40271808 + L1_Rod LINE L1 5305 5392 -455 1 1004 2141 259 66 28 chr17 55000848 55001532 -40271119 - Lx9 LINE L1 -548 7096 6387 3 1004 21 57 0 0 chr17 55001580 55001615 -40271036 + AT_rich Low_complexity Low_complexity 1 35 0 4 1004 207 0 0 0 chr17 55002466 55002489 -40270162 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1004 6842 148 7 5 chr17 55002605 55004216 -40268435 + Lx LINE L1 5035 6647 -7 6 1004 294 95 0 0 chr17 55004324 55004366 -40268285 + (A)n Simple_repeat Simple_repeat 1 42 0 7 1004 6229 122 19 29 chr17 55004549 55006211 -40266440 + L1VL4 LINE L1 194 1837 -1722 8 1004 1134 151 40 5 chr17 55006325 55006525 -40266126 - Lx2 LINE L1 0 6997 6791 9 1004 4815 128 36 10 chr17 55006526 55007301 -40265350 - Lx2 LINE L1 -354 6643 5849 9 1004 21 36 0 0 chr17 55007614 55007642 -40265009 + AT_rich Low_complexity Low_complexity 1 28 0 1 1004 463 299 105 57 chr17 55009587 55009938 -40262713 + ORR1D2 LTR MaLR 3 370 0 1 1004 247 182 0 0 chr17 55010785 55010829 -40261822 - L1_Mur2 LINE L1 -1621 4256 4213 1 1004 2093 163 49 2 chr17 55010826 55011233 -40261418 + L1_Mur2 LINE L1 4853 5278 -599 1 1004 1306 73 6 11 chr17 55011237 55011416 -40261235 + L1_Mus2 LINE L1 6292 6469 -97 1 1004 28878 104 16 6 chr17 55011395 55016551 -40256100 + L1_Mus1 LINE L1 1359 6567 0 1 1004 3780 82 6 0 chr17 55016871 55017382 -40255269 - L1_Mus4 LINE L1 -5 6631 6118 1 1004 405 237 62 41 chr17 55017473 55017602 -40255049 + MER104 DNA Tc2 32 166 -15 1 1004 915 231 46 0 chr17 55017602 55017797 -40254854 + B3 SINE B2 1 204 -12 1 1004 405 237 62 41 chr17 55017797 55017812 -40254839 + MER104 DNA Tc2 167 179 -2 1 1004 390 263 40 0 chr17 55018015 55018114 -40254537 - RLTR18B LTR ERVK -396 116 14 1 1004 249 212 128 12 chr17 55018525 55018611 -40254040 - MLT1D LTR MaLR 0 505 410 2 1004 3312 46 2 0 chr17 55019346 55019741 -40252910 + MTA_Mm LTR MaLR 1 396 0 2 1004 628 35 23 0 chr17 55020348 55020435 -40252216 + (TTTTA)n Simple_repeat Simple_repeat 5 93 0 2 1004 23 33 0 0 chr17 55020723 55020753 -40251898 + AT_rich Low_complexity Low_complexity 1 30 0 2 1004 865 258 15 0 chr17 55021876 55022074 -40250577 - B3 SINE B2 -14 202 2 2 1004 1487 131 47 36 chr17 55022074 55022352 -40250299 + Lx LINE L1 6367 6647 -7 2 1004 599 102 0 0 chr17 55022366 55022464 -40250187 + RLTR21 LTR ERVK 650 747 -825 2 1004 615 250 31 25 chr17 55022662 55022822 -40249829 + MTE2a LTR MaLR 172 332 -47 2 1004 678 298 142 60 chr17 55023198 55023412 -40249239 + L1MA6 LINE L1 4434 4646 -1497 2 1004 240 111 0 0 chr17 55023412 55023448 -40249203 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 1004 678 298 142 60 chr17 55023448 55023762 -40248889 + L1MA6 LINE L1 4647 5026 -1117 2 1004 1095 76 7 0 chr17 55023762 55023895 -40248756 + B1_Mm SINE Alu 2 135 -12 3 1004 684 24 0 0 chr17 55023895 55023977 -40248674 + (TAAAA)n Simple_repeat Simple_repeat 4 85 0 3 1004 678 298 142 60 chr17 55023987 55024085 -40248566 + L1MA6 LINE L1 5027 5126 -1017 2 1004 2347 123 91 5 chr17 55024085 55024469 -40248182 + RLTR9B2 LTR ERVK 1 417 -3 3 1004 678 304 100 56 chr17 55024469 55024865 -40247786 + L1MA6 LINE L1 5127 5525 -772 2 1004 8520 26 0 0 chr17 55024951 55026159 -40246492 - L1Md_T LINE L1 0 6582 5375 3 1004 649 263 74 48 chr17 55026169 55026611 -40246040 + L1MA6 LINE L1 5616 6060 -240 2 1004 3844 129 43 1 chr17 55027620 55028266 -40244385 - Lx3C LINE L1 -1477 4409 3737 3 1004 8045 152 25 82 chr17 55028264 55030871 -40241780 + Lx3C LINE L1 4493 6944 -32 3 1004 23 33 0 0 chr17 55030871 55030901 -40241750 + AT_rich Low_complexity Low_complexity 1 30 0 3 1004 450 79 0 0 chr17 55030966 55031029 -40241622 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1004 22 70 0 0 chr17 55031121 55031164 -40241487 + AT_rich Low_complexity Low_complexity 1 43 0 3 1004 720 329 42 45 chr17 55031360 55031742 -40240909 - Lx8 LINE L1 -198 7275 6895 3 1004 248 263 26 124 chr17 55031780 55031893 -40240758 - PB1D10 SINE Alu -7 110 9 3 1004 396 310 18 83 chr17 55031798 55031967 -40240684 - ID_B1 SINE B4 -53 171 14 4 1004 4917 41 0 13 chr17 55031988 55032599 -40240052 - L1Md_F2 LINE L1 -12 6570 5968 4 1004 1280 274 210 9 chr17 55032604 55033175 -40239476 - RCHARR1 DNA MER1_type -233 741 56 4 1004 3517 216 95 20 chr17 55033347 55033848 -40238803 - RMER17B LTR ERVK 0 958 433 4 1004 540 0 0 0 chr17 55033848 55033908 -40238743 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 1004 3517 216 95 20 chr17 55033908 55034297 -40238354 - RMER17B LTR ERVK -526 432 2 4 1004 454 303 171 48 chr17 55034454 55034787 -40237864 + LTR31 LTR ERV1 246 619 0 4 1004 2131 135 93 7 chr17 55036220 55036637 -40236014 - L1_Mur1 LINE L1 -2396 3490 3038 4 1004 622 182 0 0 chr17 55036641 55036767 -40235884 - L1_Mur1 LINE L1 -4013 1873 1748 4 1004 459 227 18 35 chr17 55036767 55036881 -40235770 + ORR1C2 LTR MaLR 263 374 -10 4 1004 249 239 42 14 chr17 55037905 55037977 -40234674 + MER5A DNA MER1_type 4 77 -112 4 1004 7906 53 1 14 chr17 55038195 55039489 -40233162 - L1Md_F2 LINE L1 -12 6570 5294 4 1004 3337 11 0 0 chr17 55039489 55039871 -40232780 - L1Md_T LINE L1 0 6582 6201 5 1004 4657 72 2 7 chr17 55039871 55039894 -40232757 - L1Md_F2 LINE L1 -590 5293 5271 4 1004 1630 116 173 13 chr17 55039885 55040191 -40232460 - L1Md_F2 LINE L1 -10 6572 6218 5 1004 322 361 194 0 chr17 55040740 55040895 -40231756 + B4A SINE B4 3 187 -105 5 1004 29 0 0 0 chr17 55041417 55041446 -40231205 + AT_rich Low_complexity Low_complexity 1 29 0 5 1004 364 346 29 22 chr17 55041446 55041585 -40231066 - B3A SINE B2 -22 176 37 5 1004 351 181 14 0 chr17 55042060 55042132 -40230519 + B1_Mur3 SINE Alu 77 149 0 5 1004 264 314 0 85 chr17 55042105 55042199 -40230452 + B4A SINE B4 201 286 -6 5 1004 4524 87 0 2 chr17 55042308 55042915 -40229736 - L1_Mus1 LINE L1 -1 6566 5961 5 1004 2511 243 42 9 chr17 55043681 55044258 -40228393 + Lx7 LINE L1 5988 6583 -1113 5 1004 1114 184 7 66 chr17 55044291 55044564 -40228087 - L1_Rod LINE L1 -2282 3565 3309 5 1004 1671 166 44 13 chr17 55044856 55045173 -40227478 - ORR1A2 LTR MaLR 0 327 1 5 1004 333 314 9 29 chr17 55045210 55045315 -40227336 + PB1D10 SINE Alu 7 109 -8 6 1004 4290 94 34 102 chr17 55045326 55046081 -40226570 + L1_Mus3 LINE L1 5926 6629 -9 6 1004 360 298 115 32 chr17 55046690 55047099 -40225552 + L1M5 LINE L1 3136 3578 -2568 6 1004 21 36 0 0 chr17 55047389 55047417 -40225234 + AT_rich Low_complexity Low_complexity 1 28 0 6 1004 306 106 0 0 chr17 55047526 55047573 -40225078 + (TA)n Simple_repeat Simple_repeat 2 48 0 6 1004 28 79 0 0 chr17 55047634 55047697 -40224954 + AT_rich Low_complexity Low_complexity 1 63 0 6 1004 540 0 0 0 chr17 55047742 55047802 -40224849 + (TA)n Simple_repeat Simple_repeat 2 61 0 6 1004 1473 178 146 22 chr17 55047802 55048164 -40224487 + BGLII_B LTR ERVK 4 410 -31 6 1004 1368 104 19 0 chr17 55048943 55049154 -40223497 + L1_Mus3 LINE L1 6417 6631 -7 6 1004 353 313 10 48 chr17 55049552 55049656 -40222995 - RMER20B LTR ERVK -38 589 490 6 1004 560 296 88 5 chr17 55049723 55049927 -40222724 - RMER20B LTR ERVK -281 346 126 6 125 437 301 41 18 chr17 55050226 55050395 -40222256 + ERVL-int LTR ERVL 870 1042 -4715 7 1005 26822 30 21 20 chr17 55050396 55053071 -40219580 + L1_Mm LINE L1 2191 4918 -965 7 1005 237 180 45 76 chr17 55053071 55053137 -40219514 - RMER20A LTR ERVK -268 248 185 7 1005 26822 30 21 20 chr17 55053137 55053790 -40218861 + L1_Mm LINE L1 4919 5586 -297 7 1005 8301 38 0 0 chr17 55053791 55054785 -40217866 + L1Md_T LINE L1 5588 6581 -1 7 1005 2451 304 69 22 chr17 55054789 55056016 -40216635 + ERVL-int LTR ERVL 2322 3618 -1867 7 1005 191 255 64 0 chr17 55056016 55056063 -40216588 + L3b LINE CR1 111 160 -322 7 1005 519 307 72 38 chr17 55056072 55056188 -40216463 + ERVL-int LTR ERVL 3669 3801 -1913 7 1005 2861 120 0 2 chr17 55056188 55056596 -40216055 + MTB_Mm LTR MaLR 1 407 0 7 1005 426 307 72 38 chr17 55056596 55056797 -40215854 + ERVL-int LTR ERVL 3802 3997 -1717 7 1005 426 289 52 125 chr17 55056854 55057007 -40215644 + L1M5 LINE L1 5279 5440 -722 7 1005 3996 106 7 7 chr17 55057007 55057596 -40215055 + L1_Mus3 LINE L1 6050 6638 0 7 1005 426 289 52 125 chr17 55057596 55057731 -40214920 + L1M5 LINE L1 5441 5546 -616 7 1005 275 188 0 190 chr17 55058453 55058532 -40214119 - RLTR23 LTR ERV1 0 430 367 7 1005 858 285 79 99 chr17 55058744 55059098 -40213553 + MTE2a LTR MaLR 27 373 -6 7 1005 192 158 0 0 chr17 55060316 55060354 -40212297 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 1005 202 184 61 0 chr17 55060355 55060404 -40212247 + (CAGAGA)n Simple_repeat Simple_repeat 2 53 0 8 1005 22 70 0 0 chr17 55060564 55060607 -40212044 + AT_rich Low_complexity Low_complexity 1 43 0 8 1005 496 348 47 16 chr17 55060658 55060848 -40211803 + MTD LTR MaLR 6 201 -218 8 1005 734 218 0 40 chr17 55060858 55061006 -40211645 + B1_Mus1 SINE Alu 7 148 0 8 1005 5736 191 92 14 chr17 55061006 55062374 -40210277 + Lx5 LINE L1 5569 7050 0 8 1005 654 104 0 0 chr17 55062433 55062529 -40210122 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 8 1005 423 0 0 0 chr17 55062533 55062580 -40210071 + (TA)n Simple_repeat Simple_repeat 2 48 0 8 1005 260 286 14 0 chr17 55062647 55062717 -40209934 + MER58C DNA MER1_type 26 96 -119 8 1005 249 315 21 11 chr17 55062736 55062829 -40209822 + GA-rich Low_complexity Low_complexity 3 96 0 8 1005 7066 34 0 0 chr17 55063243 55064077 -40208574 + L1Md_T LINE L1 5749 6582 0 9 1005 383 303 18 6 chr17 55064940 55065106 -40207545 + (TA)n Simple_repeat Simple_repeat 2 169 0 9 1005 484 305 88 65 chr17 55065133 55065268 -40207383 - MLT2D LTR ERVL -98 316 174 9 1005 4508 195 27 33 chr17 55065268 55066181 -40206470 + RMER13B LTR ERVK 1 908 0 9 1005 484 305 88 65 chr17 55066181 55066339 -40206312 - MLT2D LTR ERVL -241 173 16 9 1005 492 18 0 0 chr17 55067300 55067357 -40205294 + (TA)n Simple_repeat Simple_repeat 2 58 0 9 1005 536 244 62 25 chr17 55067941 55068101 -40204550 - MTE2b LTR MaLR -156 223 58 9 1005 837 241 172 90 chr17 55069281 55069746 -40202905 + RLTR18 LTR ERVK 4 506 -110 9 1005 1050 243 6 84 chr17 55069769 55070124 -40202527 + RMER17C LTR ERVK 1 327 -83 9 1005 3618 74 2 13 chr17 55071624 55072102 -40200549 - L1_Mus2 LINE L1 0 6566 6094 9 1005 1321 169 9 0 chr17 55072112 55072337 -40200314 - ORR1A2 LTR MaLR -100 227 1 9 1005 314 328 0 0 chr17 55072440 55072624 -40200027 + (CATA)n Simple_repeat Simple_repeat 1 184 0 1 1005 289 349 0 6 chr17 55072643 55072871 -40199780 + (CA)n Simple_repeat Simple_repeat 1 226 0 1 1005 1070 135 0 0 chr17 55073008 55073156 -40199495 - B1_Mus1 SINE Alu 0 148 1 1 1005 237 304 39 38 chr17 55073632 55073742 -40198909 + PB1D10 SINE Alu 7 116 -1 1 1005 2973 212 41 21 chr17 55074063 55074838 -40197813 - Lx9 LINE L1 -1 7643 6853 1 1005 683 249 48 65 chr17 55074825 55075317 -40197334 + Lx9 LINE L1 5889 6476 -1168 1 1005 277 266 38 0 chr17 55075329 55075408 -40197243 + RLTR23 LTR ERV1 349 430 0 1 1005 226 284 15 0 chr17 55075571 55075638 -40197013 - ORR1D2 LTR MaLR -285 85 18 1 1005 1178 322 52 8 chr17 55075704 55076089 -40196562 + MTD LTR MaLR 18 419 0 1 1005 267 293 40 13 chr17 55076184 55076260 -40196391 - PB1D9 SINE Alu -7 113 36 1 1005 1272 285 72 3 chr17 55076311 55076684 -40195967 + MTB_Mm LTR MaLR 1 399 -8 1 1005 232 271 86 0 chr17 55077163 55077233 -40195418 + ID2 SINE ID 7 82 -1 1 1005 1242 159 51 5 chr17 55077316 55077531 -40195120 + URR1B DNA MER1_type 1 225 0 1 1005 1602 234 130 43 chr17 55077670 55078208 -40194443 + RMER13B LTR ERVK 350 897 -11 1 1005 614 298 5 36 chr17 55078438 55078633 -40194018 - MTEa-int LTR MaLR -1388 192 4 1 1005 691 292 93 10 chr17 55078625 55078829 -40193822 - MTEa LTR MaLR -2 377 157 1 1005 186 125 0 0 chr17 55079213 55079223 -40193428 + (CATA)n Simple_repeat Simple_repeat 1 10 0 1 1005 413 19 19 0 chr17 55079223 55079277 -40193374 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 1 1005 186 125 0 0 chr17 55079277 55079298 -40193353 + (CATA)n Simple_repeat Simple_repeat 3 23 0 1 1005 1098 110 0 0 chr17 55079420 55079584 -40193067 + (GAGAA)n Simple_repeat Simple_repeat 4 167 0 1 1005 369 0 0 0 chr17 55079814 55079855 -40192796 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 1005 1641 204 108 0 chr17 55079976 55080402 -40192249 + Lx9 LINE L1 7173 7644 0 1 1005 2018 160 43 53 chr17 55080592 55080988 -40191663 + RMER10B LTR ERVL 1 392 -6 1 1005 244 270 13 13 chr17 55081015 55081090 -40191561 + ID_B1 SINE B4 104 178 -46 1 1005 1398 80 37 0 chr17 55081319 55081507 -40191144 + B2_Mm2 SINE B2 1 195 0 1 1005 3858 110 64 63 chr17 55082248 55082998 -40189653 + RMER17A LTR ERVK 1 751 0 1 1005 239 0 41 61 chr17 55083394 55083443 -40189208 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 1 1005 277 227 534 61 chr17 55083693 55083822 -40188829 + URR1B DNA MER1_type 1 190 -35 1 1005 329 296 110 65 chr17 55083937 55084092 -40188559 - MIRb SINE MIR -81 187 26 1 1005 596 304 25 26 chr17 55084688 55084902 -40187749 + B3A SINE B2 7 214 -2 1 1005 258 106 0 0 chr17 55084964 55085011 -40187640 + (A)n Simple_repeat Simple_repeat 1 47 0 1 1005 387 0 0 0 chr17 55085436 55085479 -40187172 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 1005 468 0 0 0 chr17 55085853 55085905 -40186746 + (GA)n Simple_repeat Simple_repeat 1 52 0 1 1005 2694 313 111 114 chr17 55087219 55087649 -40185002 + MTE-int LTR MaLR 18 356 -1224 1 1005 552 85 0 0 chr17 55087649 55087731 -40184920 + L1_Mus2 LINE L1 6485 6566 0 1 1005 2694 313 111 114 chr17 55087731 55088830 -40183821 + MTE-int LTR MaLR 357 1541 -39 1 1005 34689 44 1 19 chr17 55088838 55094045 -40178606 + L1Md_A LINE L1 481 5586 -297 1 1005 8524 28 2 0 chr17 55094045 55095038 -40177613 + L1Md_A LINE L1 5587 6581 -1 1 1005 794 344 17 49 chr17 55095045 55095393 -40177258 + ORR1D2 LTR MaLR 22 358 -12 1 1005 670 260 260 74 chr17 55096272 55096691 -40175960 - RMER20B LTR ERVK -41 586 90 1 1005 1906 224 35 23 chr17 55096751 55097220 -40175431 + L1_Rod LINE L1 994 1447 -4400 1 1005 195 129 0 0 chr17 55097220 55097251 -40175400 + (CATA)n Simple_repeat Simple_repeat 1 31 0 1 1005 1906 223 52 33 chr17 55097251 55097381 -40175270 + L1_Rod LINE L1 1448 1581 -4266 1 1005 212 0 0 35 chr17 55097381 55097410 -40175241 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 1005 1906 223 52 33 chr17 55097410 55097741 -40174910 + L1_Rod LINE L1 1582 1934 -3913 1 1005 3490 219 153 16 chr17 55097761 55098682 -40173969 + Lx4B LINE L1 6011 7058 0 1 1005 1692 257 174 9 chr17 55098694 55099442 -40173209 + L1_Rod LINE L1 1965 2838 -3009 1 1005 3366 39 15 0 chr17 55099442 55099832 -40172819 - MTA_Mm LTR MaLR 0 396 1 1 1005 1692 257 174 9 chr17 55099832 55099950 -40172701 + L1_Rod LINE L1 2839 2974 -2873 1 1005 242 322 31 63 chr17 55099957 55100116 -40172535 + MTD-int LTR MaLR 1420 1573 -7 1 1005 1118 249 119 31 chr17 55100121 55100448 -40172203 + MTD LTR MaLR 1 356 -63 1 1005 247 331 7 7 chr17 55101342 55101479 -40171172 - L1MA5 LINE L1 -6 6294 6158 1 1005 687 273 69 78 chr17 55101533 55101690 -40170961 - RLTR20B3 LTR ERVK -219 358 205 1 1005 722 11 0 11 chr17 55101690 55101778 -40170873 + (TCTCCC)n Simple_repeat Simple_repeat 4 90 0 1 1005 687 273 69 78 chr17 55101778 55101981 -40170670 - RLTR20B3 LTR ERVK -373 204 2 1 1005 207 0 0 0 chr17 55102122 55102145 -40170506 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1005 1585 329 116 10 chr17 55102145 55102394 -40170257 + RMER15-int LTR ERVL 476 752 -4247 1 1005 450 0 0 0 chr17 55102394 55102444 -40170207 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 1005 1585 338 55 20 chr17 55102444 55103217 -40169434 + RMER15-int LTR ERVL 753 1551 -3448 1 1005 349 355 145 0 chr17 55103593 55103759 -40168892 + RMER15-int LTR ERVL 1965 2154 -2845 1 1005 273 289 22 0 chr17 55103824 55103914 -40168737 + RMER15-int LTR ERVL 2296 2387 -2612 1 1005 728 75 19 0 chr17 55104841 55104948 -40167703 + (CATA)n Simple_repeat Simple_repeat 3 111 0 1 1005 984 238 46 31 chr17 55105139 55105399 -40167252 - Lx7 LINE L1 -1119 6577 6314 1 1005 1144 212 4 17 chr17 55105402 55105637 -40167014 + Lx7 LINE L1 6619 6850 -846 1 1005 827 194 35 35 chr17 55105641 55105844 -40166807 - Lx9 LINE L1 -490 7154 6952 1 1005 752 195 13 7 chr17 55105828 55105983 -40166668 - Lx9 LINE L1 -1717 5927 5772 1 1005 4072 81 0 0 chr17 55106015 55106545 -40166106 - L1_Mus1 LINE L1 0 6567 6038 1 1005 512 90 0 0 chr17 55106819 55106897 -40165754 - L1_Mm LINE L1 -863 5020 4943 1 1005 3516 113 0 4 chr17 55106893 55107433 -40165218 + L1_Mm LINE L1 5018 5555 -328 1 1005 345 330 28 0 chr17 55109785 55109891 -40162760 + PB1D10 SINE Alu 9 117 0 1 1005 351 44 0 0 chr17 55110136 55110181 -40162470 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1005 637 277 10 41 chr17 55110450 55110646 -40162005 - B3A SINE B2 -8 190 1 1 1005 1665 89 13 0 chr17 55110738 55110975 -40161676 + L1_Mm LINE L1 5416 5655 -228 1 1005 418 114 25 25 chr17 55110973 55111054 -40161597 - Lx3_Mus LINE L1 -405 6604 6524 1 1005 3043 99 36 4 chr17 55111033 55111529 -40161122 - L1_Mur1 LINE L1 -755 5131 4620 1 1005 2978 99 11 14 chr17 55111534 55111975 -40160676 - L1_Mus3 LINE L1 -2 6636 6197 1 1005 509 121 33 0 chr17 55111982 55112073 -40160578 - L1_Mur1 LINE L1 -1393 4493 4400 1 1005 308 347 46 28 chr17 55112645 55113078 -40159573 - L1MA4A LINE L1 -378 5925 5485 1 1005 307 303 83 48 chr17 55113090 55113319 -40159332 - L1MA4A LINE L1 -744 5399 5163 1 1005 275 341 71 36 chr17 55113849 55113989 -40158662 + MER20 DNA MER1_type 1 145 -74 1 1005 21 0 0 0 chr17 55116227 55116248 -40156403 + AT_rich Low_complexity Low_complexity 1 21 0 1 1005 4367 197 60 5 chr17 55116251 55117325 -40155326 - Lx4B LINE L1 -50 7008 5780 1 1005 3257 52 5 2 chr17 55117325 55117733 -40154918 - L1Md_F3 LINE L1 -14 6570 6162 1 1005 1640 298 9 0 chr17 55118103 55118570 -40154081 + MT2A LTR ERVL 19 489 -44 1 1005 550 175 16 0 chr17 55118570 55118686 -40153965 + (TA)n Simple_repeat Simple_repeat 2 119 0 1 1005 333 0 0 0 chr17 55118686 55118723 -40153928 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1005 550 175 16 0 chr17 55118723 55118732 -40153919 + (TA)n Simple_repeat Simple_repeat 1 9 0 1 1005 363 44 0 0 chr17 55119307 55119352 -40153299 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 1005 504 421 19 5 chr17 55119606 55119816 -40152835 - MLT1H LTR MaLR -203 346 134 1 1005 391 305 34 34 chr17 55119861 55119892 -40152759 - RMER15 LTR ERVL -3 572 540 1 1005 777 22 0 0 chr17 55119892 55119983 -40152668 + (CATATA)n Simple_repeat Simple_repeat 5 95 0 1 1005 391 305 34 34 chr17 55119983 55120097 -40152554 - RMER15 LTR ERVL -36 539 427 1 1005 2426 174 2 4 chr17 55120104 55120593 -40152058 + L1_Mur2 LINE L1 4906 5393 -484 1 1005 9233 54 1 0 chr17 55120590 55121886 -40150765 - L1Md_F2 LINE L1 -625 5957 4661 1 1005 5116 67 0 5 chr17 55121886 55122546 -40150105 + L1Md_F2 LINE L1 5926 6582 0 1 1005 6797 117 13 15 chr17 55122547 55123818 -40148833 + Lx LINE L1 5386 6654 0 1 1005 518 288 0 0 chr17 55124134 55124252 -40148399 - B3A SINE B2 -80 118 1 1 1005 22 56 0 0 chr17 55124552 55124588 -40148063 + AT_rich Low_complexity Low_complexity 1 36 0 1 1005 383 338 102 35 chr17 55124659 55125063 -40147588 - BLACKJACK DNA AcHobo -803 2141 1711 1 1005 321 268 116 53 chr17 55125207 55125510 -40147141 - BLACKJACK DNA AcHobo -1412 1532 1211 1 1005 444 248 51 0 chr17 55125538 55125655 -40146996 + ORR1D1 LTR MaLR 1 123 -251 1 1005 1500 230 112 11 chr17 55125760 55125828 -40146823 - RLTR20C LTR ERVK 0 541 441 1 1005 396 0 0 0 chr17 55125828 55125872 -40146779 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1005 1500 214 81 4 chr17 55125872 55126200 -40146451 - RLTR20C LTR ERVK -89 445 94 1 1005 6685 159 18 14 chr17 55126215 55127397 -40145254 - Lx3C LINE L1 -6 6970 5784 1 1005 483 159 103 0 chr17 55127412 55127519 -40145132 - RLTR47_MM LTR ERV1 -412 120 3 1 1005 291 311 37 7 chr17 55127738 55127874 -40144777 - RLTR6-int LTR ERV1 -192 7586 7447 1 1005 359 214 79 0 chr17 55128227 55128316 -40144335 - L1_Mur1 LINE L1 -6137 845 750 1 1005 268 135 19 0 chr17 55128455 55128507 -40144144 - L1_Mur1 LINE L1 -6249 733 681 1 1005 508 156 15 30 chr17 55128511 55128613 -40144038 - RLTR20A LTR ERVK -437 123 22 1 1005 401 264 99 9 chr17 55128640 55128751 -40143900 + ORR1D1 LTR MaLR 252 372 -2 1 1005 873 307 20 0 chr17 55129148 55129402 -40143249 + RMER1B Other Other 8 266 -800 1 1005 682 203 35 7 chr17 55129449 55129593 -40143058 + B1_Mur4 SINE Alu 1 148 -2 1 1005 275 49 0 24 chr17 55129646 55129688 -40142963 + (CAA)n Simple_repeat Simple_repeat 2 42 0 1 1005 928 238 163 21 chr17 55129818 55130350 -40142301 + L1MC LINE L1 2801 3407 -2739 1 1005 529 38 38 0 chr17 55130407 55130486 -40142165 + (TCTA)n Simple_repeat Simple_repeat 4 85 0 1 1005 444 286 95 6 chr17 55130489 55130668 -40141983 + L1MC LINE L1 3623 3817 -2329 1 1005 24 0 0 0 chr17 55130777 55130801 -40141850 + AT_rich Low_complexity Low_complexity 1 24 0 1 1005 7283 40 5 0 chr17 55130872 55131790 -40140861 - L1Md_T LINE L1 0 6582 5660 1 1005 3351 39 2 132 chr17 55131790 55132291 -40140360 + RLTR10C LTR ERVK 1 436 0 1 1005 1449 33 6 0 chr17 55132291 55132474 -40140177 + MMERVK10C-int LTR ERVK 1 184 -7397 1 1005 234 200 0 0 chr17 55132474 55132514 -40140137 + RLTR27 LTR ERVK 236 275 -34 1 1005 773 118 0 0 chr17 55132514 55132633 -40140018 + MMERVK10C-int LTR ERVK 225 343 -7238 1 1005 595 187 73 29 chr17 55132631 55132892 -40139759 + MMERVK10C-int LTR ERVK 729 952 -6629 1 1005 742 173 262 12 chr17 55132984 55133224 -40139427 + MMERVK10C-int LTR ERVK 312 611 -4795 1 1005 296 248 120 30 chr17 55133220 55133353 -40139298 + MMERVK10C-int LTR ERVK 524 668 -5469 1 1005 320 138 17 0 chr17 55133353 55133411 -40139240 + MMERVK10C-int LTR ERVK 1721 1779 -5627 1 1005 332 127 0 0 chr17 55133418 55133481 -40139170 + MMERVK10C-int LTR ERVK 1885 1947 -5634 1 1005 41157 30 1 10 chr17 55133487 55138564 -40134087 + MMERVK10C-int LTR ERVK 2552 7581 0 1 1005 3356 41 0 132 chr17 55138564 55139066 -40133585 + RLTR10C LTR ERVK 1 436 0 1 1005 34880 40 3 7 chr17 55139066 55144348 -40128303 - L1Md_A LINE L1 -218 5665 414 1 1005 30 27 0 0 chr17 55144418 55144455 -40128196 + AT_rich Low_complexity Low_complexity 1 37 0 1 1005 841 306 126 7 chr17 55144473 55145336 -40127315 + L1MC LINE L1 3877 4842 -1304 1 1005 216 0 0 0 chr17 55145356 55145380 -40127271 + (GTTTG)n Simple_repeat Simple_repeat 1 24 0 2 1005 474 33 0 0 chr17 55145381 55145441 -40127210 + (T)n Simple_repeat Simple_repeat 1 60 0 2 1005 2459 214 45 21 chr17 55145522 55146127 -40126524 - Lx5 LINE L1 -5 7045 6427 2 1005 2496 193 44 26 chr17 55146150 55146275 -40126376 - Lx5 LINE L1 -867 6183 6047 2 1005 219 36 0 0 chr17 55146275 55146303 -40126348 + (CCCA)n Simple_repeat Simple_repeat 3 30 0 2 1005 6002 174 42 7 chr17 55146303 55147694 -40124957 - Lx5 LINE L1 -1004 6046 4604 2 1005 1069 84 7 0 chr17 55147697 55147852 -40124799 + L1_Mus2 LINE L1 6197 6352 -214 2 1005 26436 108 18 12 chr17 55147839 55148947 -40123704 + Lx3A LINE L1 1514 2620 -3266 2 1005 2959 20 0 42 chr17 55148947 55149308 -40123343 + ORR1A0 LTR MaLR 1 346 0 2 1005 26436 111 18 11 chr17 55149308 55153442 -40119209 + Lx3A LINE L1 2621 6788 -193 2 1005 2913 138 80 9 chr17 55153426 55154002 -40118649 - Lx5 LINE L1 -5991 993 377 2 1005 1596 210 56 2 chr17 55153999 55154865 -40117786 - L1_Mur2 LINE L1 -4008 1872 915 2 1005 705 194 0 50 chr17 55155390 55155531 -40117120 - RMER13A LTR ERVK -725 135 2 2 1005 1050 170 19 5 chr17 55155533 55155746 -40116905 - L1_Mur2 LINE L1 -581 5296 5081 2 1005 288 133 0 0 chr17 55155745 55155790 -40116861 + Lx6 LINE L1 6781 6825 -635 2 1005 902 269 173 71 chr17 55155799 55155830 -40116821 + RMER4B LTR ERVK 17 45 -540 2 1005 1100 110 0 0 chr17 55155830 55155975 -40116676 + B1_Mus1 SINE Alu 2 146 -2 2 1005 902 269 173 71 chr17 55155975 55156451 -40116200 + RMER4B LTR ERVK 46 576 -9 2 1005 1459 242 167 31 chr17 55156462 55157038 -40115613 + Lx7 LINE L1 6831 7484 -212 2 1005 645 58 0 0 chr17 55158206 55158292 -40114359 + (TTCC)n Simple_repeat Simple_repeat 3 88 0 2 1005 1106 83 7 0 chr17 55158308 55158453 -40114198 - B1_Mus1 SINE Alu -2 146 1 2 1005 1203 251 107 27 chr17 55158615 55158943 -40113708 - MTEa LTR MaLR -8 371 18 2 1005 7899 65 2 1 chr17 55159170 55160235 -40112416 + L1Md_F2 LINE L1 4521 5586 -297 2 1005 8068 42 6 0 chr17 55160235 55161213 -40111438 + L1Md_F2 LINE L1 5587 6570 -12 2 1005 5825 153 5 5 chr17 55162750 55163811 -40108840 - L1_Mm LINE L1 -697 5186 4126 2 1005 4228 162 16 0 chr17 55163811 55164602 -40108049 + L1_Mur2 LINE L1 3298 4101 -1776 2 1005 1279 275 77 25 chr17 55164695 55165291 -40107360 - RMER19A LTR ERVK -5 732 1 2 1005 270 270 17 67 chr17 55165349 55165468 -40107183 + PB1D10 SINE Alu 5 117 0 2 1005 487 335 61 29 chr17 55166199 55166479 -40106172 + B4A SINE B4 4 292 0 2 1005 653 326 45 45 chr17 55166580 55166992 -40105659 - L1MB2 LINE L1 -69 6102 5687 2 1005 255 93 0 0 chr17 55166992 55167035 -40105616 + (TCTG)n Simple_repeat Simple_repeat 4 46 0 2 1005 772 324 45 45 chr17 55167035 55167088 -40105563 - L1MB2 LINE L1 -485 5686 5637 2 1005 441 296 28 0 chr17 55167155 55167334 -40105317 - L1MA6 LINE L1 0 6300 6117 2 1005 215 370 56 0 chr17 55167676 55167838 -40104813 + MIR SINE MIR 82 252 -10 2 1005 1686 246 58 10 chr17 55168272 55168666 -40103985 - MTC LTR MaLR -8 413 1 2 1005 2220 201 51 32 chr17 55168725 55169250 -40103401 - RLTR20B3 LTR ERVK -16 561 27 2 1005 271 200 0 0 chr17 55169270 55169330 -40103321 - L1MB2 LINE L1 -643 5540 5481 2 1005 241 299 8 30 chr17 55169683 55169814 -40102837 - L1MB2 LINE L1 -1507 4633 4506 2 1005 4504 107 6 1 chr17 55169833 55170479 -40102172 - L1_Mus3 LINE L1 -5 6633 5985 2 1005 4066 95 1 5 chr17 55170480 55171169 -40101482 + L1_Mus3 LINE L1 5282 5968 -598 2 1005 2904 92 14 47 chr17 55171193 55171638 -40101013 + L1_Mus2 LINE L1 6136 6565 -1 2 1005 327 65 0 0 chr17 55171749 55171795 -40100856 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 1005 38 0 0 0 chr17 55171795 55171833 -40100818 + AT_rich Low_complexity Low_complexity 1 38 0 2 1005 505 301 122 64 chr17 55171833 55172454 -40100197 - L1MB2 LINE L1 -1767 4373 3717 2 1005 372 232 12 24 chr17 55172862 55172946 -40099705 - PB1D10 SINE Alu -1 116 34 2 1005 429 66 0 0 chr17 55173558 55173619 -40099032 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1005 281 286 0 0 chr17 55173623 55173686 -40098965 - ID4_ SINE ID -11 72 10 2 1005 531 322 111 17 chr17 55174846 55175134 -40097517 - Lx9 LINE L1 -154 7490 7176 2 1005 526 232 71 34 chr17 55175324 55175578 -40097073 + L1VL4 LINE L1 702 977 -6005 2 1005 2857 178 11 23 chr17 55175604 55176133 -40096518 + Lx2B LINE L1 6130 6652 -348 2 1005 866 271 5 9 chr17 55176131 55176347 -40096304 + Lx2B LINE L1 6772 6986 -14 2 1005 1158 177 182 15 chr17 55176466 55176735 -40095916 + RMER19B LTR ERVK 577 890 -12 2 1005 194 375 56 88 chr17 55177203 55177335 -40095316 + L3 LINE CR1 3679 3804 -685 2 1005 1899 88 85 0 chr17 55177335 55177607 -40095044 - L1_Mus2 LINE L1 -1 6565 6271 2 1005 194 375 56 88 chr17 55177607 55177723 -40094928 + L3 LINE CR1 3805 3919 -570 2 1005 453 261 9 18 chr17 55179021 55179134 -40093517 + B3 SINE B2 2 113 -103 2 1005 5796 133 13 29 chr17 55179175 55180174 -40092477 - RLTR13C1 LTR ERVK 0 983 1 2 1005 1247 147 111 49 chr17 55180621 55181032 -40091619 + RLTR1B LTR ERV1 1 410 -102 2 1005 1004 157 24 0 chr17 55181036 55181202 -40091449 + RLTR1B LTR ERV1 343 512 0 2 1006 1487 252 56 30 chr17 55181319 55181712 -40090939 - MTD LTR MaLR -11 408 6 2 1006 232 277 46 0 chr17 55181717 55181782 -40090869 - MTD-int LTR MaLR 0 1258 1191 2 1006 2442 241 143 70 chr17 55181769 55182596 -40090055 - MTD-int LTR MaLR -370 888 2 2 1006 1735 246 32 10 chr17 55182597 55183000 -40089651 - MTD LTR MaLR 0 419 8 2 1006 246 32 0 0 chr17 55183470 55183501 -40089150 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1006 1109 260 290 9 chr17 55183512 55183967 -40088684 + ERVL-int LTR ERVL 4182 4738 -1019 2 1006 198 0 0 0 chr17 55183967 55183989 -40088662 + (TTG)n Simple_repeat Simple_repeat 3 24 0 2 1006 1109 304 129 3 chr17 55183989 55184246 -40088405 + ERVL-int LTR ERVL 4727 4954 -713 2 1006 6465 97 71 3 chr17 55184368 55185873 -40086778 - L1_Mus3 LINE L1 0 6638 5050 2 1006 480 35 0 0 chr17 55186216 55186274 -40086377 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 1006 1338 287 63 20 chr17 55186327 55186821 -40085830 - Lx7 LINE L1 -436 7260 6746 2 1006 1144 271 59 38 chr17 55187033 55187656 -40084995 + ERVL-int LTR ERVL 5094 5761 0 2 1006 577 369 70 36 chr17 55187656 55188072 -40084579 + MT2A LTR ERVL 1 430 -103 2 1006 24 32 0 0 chr17 55188093 55188124 -40084527 + AT_rich Low_complexity Low_complexity 1 31 0 2 1006 2165 287 68 73 chr17 55189000 55190362 -40082289 + L1_Mur3 LINE L1 2187 3542 -2338 2 1006 287 294 20 81 chr17 55190452 55190600 -40082051 + RMER4B LTR ERVK 25 163 -422 2 1006 780 294 93 13 chr17 55190811 55191187 -40081464 + L1_Mur3 LINE L1 3552 3957 -1923 2 1006 1140 322 42 56 chr17 55191220 55191789 -40080862 + Lx8 LINE L1 6663 7223 -250 2 1006 32 57 0 0 chr17 55191800 55191853 -40080798 + AT_rich Low_complexity Low_complexity 1 53 0 2 1006 923 207 131 39 chr17 55192180 55192517 -40080134 - RLTR9A LTR ERVK 0 368 1 2 1006 371 403 102 17 chr17 55192678 55192971 -40079680 + MER45C DNA Tip100 42 359 -594 2 1006 229 405 80 48 chr17 55193051 55193238 -40079413 + MER45C DNA Tip100 490 682 -271 2 1006 308 111 0 18 chr17 55193330 55193385 -40079266 + (TTTC)n Simple_repeat Simple_repeat 4 57 0 2 1006 411 310 131 22 chr17 55193601 55194039 -40078612 - L1MC LINE L1 -3311 2835 2334 2 1006 443 248 120 0 chr17 55194454 55194571 -40078080 + MTE2a LTR MaLR 10 140 -239 2 1006 364 293 88 35 chr17 55194571 55194623 -40078028 + MT2A LTR ERVL 10 187 -346 2 1006 660 108 0 0 chr17 55194623 55194716 -40077935 - L1_Mus3 LINE L1 -267 6369 6277 2 1006 1572 75 12 29 chr17 55194716 55194962 -40077689 + L1_Mus3 LINE L1 6389 6630 -8 2 1006 282 228 64 64 chr17 55194984 55195078 -40077573 - RMER17A2 LTR ERVK -490 416 293 2 1006 430 298 115 84 chr17 55195078 55195101 -40077550 + MT2A LTR ERVL 157 178 -355 2 1006 1182 112 0 0 chr17 55195101 55195279 -40077372 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 2 1006 282 228 64 64 chr17 55195279 55195334 -40077317 - RMER17A2 LTR ERVK -614 292 244 2 1006 430 298 115 84 chr17 55195334 55195541 -40077110 + MT2A LTR ERVL 179 451 -82 2 1006 28 29 0 0 chr17 55195584 55195619 -40077032 + AT_rich Low_complexity Low_complexity 1 35 0 2 1006 226 229 0 0 chr17 55195632 55195680 -40076971 + (CATATA)n Simple_repeat Simple_repeat 4 51 0 2 1006 6337 142 24 27 chr17 55196117 55197852 -40074799 - Lx LINE L1 -1 6653 4915 2 1006 24833 137 20 85 chr17 55197862 55203815 -40068836 + L1_Mus2 LINE L1 484 6015 -551 2 1006 371 289 152 11 chr17 55203955 55204218 -40068433 - L1MCa LINE L1 -5151 1357 1058 2 1006 414 0 0 0 chr17 55204242 55204288 -40068363 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1006 243 146 0 0 chr17 55204447 55204488 -40068163 + (TTG)n Simple_repeat Simple_repeat 2 42 0 2 1006 321 323 120 10 chr17 55204490 55204781 -40067870 - L1MCa LINE L1 -5461 1047 725 2 1006 1090 293 77 49 chr17 55204782 55205291 -40067360 + RMER5 LTR ERV1 1 523 -11 2 1006 1356 220 133 6 chr17 55207307 55207646 -40065005 - ORR1C2 LTR MaLR 0 384 3 2 1006 365 367 6 80 chr17 55208362 55208525 -40064126 + ORR1D2 LTR MaLR 15 165 -205 2 1006 653 328 48 24 chr17 55208650 55208914 -40063737 + ORR1D2-int LTR MaLR 9 274 -1096 2 1006 447 315 55 6 chr17 55208914 55209077 -40063574 + Lx8 LINE L1 6936 7106 -367 2 1006 1299 106 53 10 chr17 55209643 55209852 -40062799 - Lx3_Mus LINE L1 -1 7008 6791 2 1006 486 0 0 0 chr17 55209887 55209941 -40062710 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 1006 30 45 0 0 chr17 55210520 55210564 -40062087 + AT_rich Low_complexity Low_complexity 1 44 0 2 1006 489 353 82 49 chr17 55210807 55211135 -40061516 + MLT1A1 LTR MaLR 69 407 -1 2 1006 770 267 48 10 chr17 55211315 55211523 -40061128 + B3 SINE B2 1 216 0 2 1006 7102 56 20 6 chr17 55211720 55212655 -40059996 - RLTR13D5 LTR ERVK 0 1023 76 2 1006 227 153 13 65 chr17 55212655 55212732 -40059919 + C-rich Low_complexity Low_complexity 4 76 0 2 1006 451 145 14 3 chr17 55212739 55212819 -40059832 - RLTR13D5 LTR ERVK -727 79 1 2 1006 1372 104 39 9 chr17 55212949 55213181 -40059470 - Lx2A1 LINE L1 0 7008 6770 2 1006 255 271 52 85 chr17 55213184 55213337 -40059314 + ORSL DNA Tip100 128 275 0 2 1006 241 286 35 12 chr17 55213444 55213529 -40059122 - ORR1E LTR MaLR -4 355 269 2 1006 1084 246 40 29 chr17 55213824 55214294 -40058357 - RMER15 LTR ERVL -43 532 1 2 1006 2083 88 0 10 chr17 55215327 55215626 -40057025 + L1Md_F2 LINE L1 6287 6582 0 2 1006 21 89 0 0 chr17 55216894 55216950 -40055701 + AT_rich Low_complexity Low_complexity 1 56 0 2 1006 21 57 0 0 chr17 55217283 55217318 -40055333 + AT_rich Low_complexity Low_complexity 1 35 0 2 1006 32 75 0 0 chr17 55217338 55217405 -40055246 + AT_rich Low_complexity Low_complexity 1 67 0 2 1006 366 123 0 0 chr17 55217882 55217939 -40054712 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1006 288 53 0 0 chr17 55219721 55219759 -40052892 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 2 1006 948 127 6 17 chr17 55220617 55220793 -40051858 + (GGAA)n Simple_repeat Simple_repeat 4 177 0 2 1006 726 131 48 0 chr17 55220827 55220972 -40051679 + GA-rich Low_complexity Low_complexity 5 156 0 2 1006 232 143 76 45 chr17 55221283 55221349 -40051302 + (TAATG)n Simple_repeat Simple_repeat 3 70 0 2 1006 1810 170 24 35 chr17 55221416 55221787 -40050864 + ORR1B2 LTR MaLR 1 367 0 2 1006 333 268 137 25 chr17 55221983 55222297 -40050354 + L1MC5 LINE L1 7555 7903 -58 2 1006 270 0 0 0 chr17 55223065 55223095 -40049556 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1006 633 278 144 35 chr17 55223096 55223353 -40049298 - MTEb LTR MaLR -20 359 75 3 1006 4156 117 19 36 chr17 55223353 55224074 -40048577 - Lx3B LINE L1 -334 6639 5931 3 1006 271 261 0 0 chr17 55224072 55224141 -40048510 + Lx7 LINE L1 7265 7333 -363 3 1006 25 31 0 0 chr17 55224144 55224176 -40048475 + AT_rich Low_complexity Low_complexity 1 32 0 3 1006 237 210 33 25 chr17 55224178 55224276 -40048375 - Lx9 LINE L1 -25 7619 7520 3 1006 501 17 0 0 chr17 55224276 55224334 -40048317 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 1006 352 238 8 6 chr17 55224334 55224430 -40048221 - Lx9 LINE L1 -125 7519 7386 3 1006 1314 228 159 33 chr17 55224438 55224896 -40047755 - Lx9 LINE L1 -550 7094 6579 3 1006 645 284 0 9 chr17 55224916 55225133 -40047518 - L1_Mur3 LINE L1 -3426 2454 2240 3 1006 1362 324 27 4 chr17 55225139 55225613 -40047038 + Lx8 LINE L1 6731 7215 -258 3 1006 1337 182 0 0 chr17 55226889 55227114 -40045537 - URR1B DNA MER1_type 0 225 1 3 1006 444 19 0 0 chr17 55227610 55227663 -40044988 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1006 744 179 20 20 chr17 55227762 55227910 -40044741 - RMER17D2 LTR ERVK -15 794 647 3 1006 1718 70 4 1 chr17 55227906 55228166 -40044485 + RMER17A LTR ERVK 13 291 -598 3 1006 327 83 0 0 chr17 55228166 55228214 -40044437 - RMER17A-int LTR ERVK -643 1085 1038 3 1006 306 0 0 0 chr17 55228281 55228315 -40044336 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 1006 206 119 83 0 chr17 55228335 55228419 -40044232 + (TTATA)n Simple_repeat Simple_repeat 2 92 0 3 1006 361 281 52 10 chr17 55229319 55229416 -40043235 + PB1D10 SINE Alu 9 109 -8 3 1006 531 31 0 0 chr17 55231429 55231494 -40041157 + (TC)n Simple_repeat Simple_repeat 1 65 0 3 1006 276 250 171 0 chr17 55232102 55232178 -40040473 + B1F2 SINE Alu 16 104 -45 3 1006 1652 224 40 87 chr17 55232207 55232703 -40039948 - RLTR1B LTR ERV1 0 512 1 3 1006 315 0 0 0 chr17 55233301 55233336 -40039315 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3 1006 1112 72 0 0 chr17 55234905 55235043 -40037608 + B1_Mm SINE Alu 1 138 -9 3 1006 225 0 0 0 chr17 55235043 55235068 -40037583 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 3 1006 926 273 138 12 chr17 55235174 55235534 -40037117 - MTD LTR MaLR -14 405 5 3 1006 2463 254 32 51 chr17 55235888 55236492 -40036159 + Lx8 LINE L1 4942 5525 -355 3 1006 3199 174 158 73 chr17 55236492 55237322 -40035329 - RMER19B LTR ERVK 0 902 3 3 1006 2463 261 31 47 chr17 55237322 55237714 -40034937 + Lx8 LINE L1 5526 5920 -1553 3 1006 379 295 61 43 chr17 55237731 55237894 -40034757 + Lx8 LINE L1 6279 6444 -1252 3 1006 219 167 0 0 chr17 55237956 55237998 -40034653 + (GTTTG)n Simple_repeat Simple_repeat 1 42 0 3 1006 264 355 9 18 chr17 55239589 55239701 -40032950 + MER94 DNA AcHobo 1 111 -23 3 1006 403 285 41 120 chr17 55240712 55241079 -40031572 + L1M3 LINE L1 3619 3956 -2184 3 1006 358 293 121 36 chr17 55241148 55241594 -40031057 + L1M3 LINE L1 4420 4903 -1237 3 1006 279 296 78 39 chr17 55242259 55242361 -40030290 + MamRep1879 DNA hAT? 1 106 -110 3 1006 380 273 15 131 chr17 55243788 55243910 -40028741 + L1M3 LINE L1 5171 5284 -859 3 1006 259 340 28 0 chr17 55243910 55244016 -40028635 + PB1D10 SINE Alu 1 109 -8 3 1006 380 273 15 131 chr17 55244016 55244034 -40028617 + L1M3 LINE L1 5285 5298 -845 3 1006 1152 68 0 0 chr17 55244034 55244197 -40028454 + (CA)n Simple_repeat Simple_repeat 2 164 0 3 1006 380 294 27 108 chr17 55244197 55244287 -40028364 + L1M3 LINE L1 5299 5400 -746 3 1006 405 0 0 0 chr17 55244328 55244373 -40028278 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 3 1006 2266 253 115 43 chr17 55244386 55245263 -40027388 + Lx9 LINE L1 5230 6345 -1299 3 1006 336 83 0 0 chr17 55245263 55245311 -40027340 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1006 2266 248 85 27 chr17 55245311 55245890 -40026761 + Lx9 LINE L1 6346 6919 -725 3 1006 962 265 42 34 chr17 55245898 55246325 -40026326 - RMER13A LTR ERVK -67 891 489 3 1006 2103 174 97 15 chr17 55246405 55246473 -40026178 - RLTR16 LTR ERVK -13 492 416 3 1006 774 0 0 0 chr17 55246473 55246559 -40026092 + (GA)n Simple_repeat Simple_repeat 1 86 0 3 1006 2103 174 97 15 chr17 55246559 55246945 -40025706 - RLTR16 LTR ERVK -90 415 1 3 1006 2390 168 57 20 chr17 55246950 55247406 -40025245 - RMER13A LTR ERVK -387 473 1 3 1006 714 259 108 92 chr17 55247408 55247909 -40024742 - RMER17A-int LTR ERVK -2 1726 1218 3 1006 34431 57 30 32 chr17 55247925 55254427 -40018224 - L1Md_T LINE L1 0 6582 98 3 1006 536 221 35 21 chr17 55254470 55254613 -40018038 - RMER17A-int LTR ERVK -518 1210 1066 3 1006 350 232 10 0 chr17 55254716 55254815 -40017836 - RMER17A-int LTR ERVK -641 1087 988 3 1006 394 109 10 42 chr17 55255657 55255753 -40016898 + GA-rich Low_complexity Low_complexity 5 97 0 3 1006 3571 205 97 9 chr17 55255901 55256673 -40015978 - RMER13A LTR ERVK -18 842 3 3 1006 873 256 11 103 chr17 55256679 55257028 -40015623 + Lx9 LINE L1 6926 7242 -402 3 1006 4442 76 40 3 chr17 55257241 55257849 -40014802 - L1_Mus3 LINE L1 -6 6632 6003 3 1006 231 253 56 67 chr17 55257849 55257938 -40014713 - MTD-int LTR MaLR -1282 88 1 3 1006 888 299 85 26 chr17 55257942 55258282 -40014369 - MTD LTR MaLR -14 405 46 3 1006 1131 89 0 0 chr17 55258545 55258691 -40013960 - B1_Mus2 SINE Alu 0 147 2 3 1006 2699 60 0 11 chr17 55258821 55259175 -40013476 - L1Md_F2 LINE L1 -12 6570 6221 3 1006 466 288 32 30 chr17 55259817 55260031 -40012620 + ORR1D2 LTR MaLR 152 370 0 3 1006 418 274 136 10 chr17 55260762 55260865 -40011786 + RSINE1 SINE B4 21 136 -29 3 1006 222 37 0 0 chr17 55260879 55260906 -40011745 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1006 192 254 93 53 chr17 55261209 55261284 -40011367 - MIR SINE MIR -106 156 79 3 1006 509 295 100 7 chr17 55261427 55261577 -40011074 - B3A SINE B2 -34 164 1 3 1006 265 230 19 29 chr17 55262609 55262758 -40009893 + A-rich Low_complexity Low_complexity 1 147 0 3 1006 3626 160 7 41 chr17 55263208 55263891 -40008760 - Lx4B LINE L1 -8 7050 6391 3 1006 23 33 0 0 chr17 55265608 55265638 -40007013 + AT_rich Low_complexity Low_complexity 1 30 0 3 1006 383 221 0 0 chr17 55266253 55266321 -40006330 + PB1D9 SINE Alu 2 69 -51 3 1006 281 285 204 0 chr17 55266333 55266568 -40006083 + Lx9 LINE L1 7298 7580 -64 3 1006 546 198 9 36 chr17 55266569 55266679 -40005972 + RMER20B LTR ERVK 519 625 -2 3 1006 342 324 76 10 chr17 55266986 55267276 -40005375 + L1ME3A LINE L1 5611 5919 -254 3 1006 552 272 44 84 chr17 55268047 55268272 -40004379 - B3 SINE B2 0 216 1 3 1006 2956 46 52 0 chr17 55269196 55269565 -40003086 - RLTR10 LTR ERVK -2 388 1 3 1006 332 298 23 46 chr17 55270879 55271009 -40001642 + MTEb LTR MaLR 249 375 -4 3 1006 35 71 0 0 chr17 55271257 55271327 -40001324 + AT_rich Low_complexity Low_complexity 1 70 0 3 1006 3280 45 0 8 chr17 55271450 55271849 -40000802 + MTA_Mm LTR MaLR 1 396 0 3 1006 418 239 95 35 chr17 55271904 55272073 -40000578 - Lx7 LINE L1 -3 7693 7515 3 1006 599 220 6 25 chr17 55272103 55272266 -40000385 - Lx7 LINE L1 -280 7416 7257 3 1006 611 204 23 0 chr17 55272276 55272408 -40000243 - Lx7 LINE L1 -887 6809 6675 3 1006 390 252 45 15 chr17 55272715 55272848 -39999803 - L1MC3 LINE L1 -1311 6474 6338 3 1006 316 233 93 7 chr17 55273006 55273157 -39999494 - L1MC3 LINE L1 -2035 5960 5797 3 1006 239 211 0 37 chr17 55273189 55273243 -39999408 - MLT1A1 LTR MaLR -2 406 355 3 1006 344 331 40 45 chr17 55274275 55274452 -39998199 - MER58A DNA MER1_type -12 212 37 3 1006 7902 118 14 5 chr17 55274478 55275803 -39996848 + L1_Mur2 LINE L1 2177 3513 -2364 3 1006 604 325 91 48 chr17 55275834 55275885 -39996766 + RMER19B LTR ERVK 1 61 -676 3 1006 520 68 0 43 chr17 55275885 55275977 -39996674 + L1_Mus2 LINE L1 6479 6566 0 3 1006 3817 220 55 34 chr17 55275977 55276875 -39995776 + RMER19B LTR ERVK 47 883 -19 3 1006 4805 57 11 2 chr17 55276877 55277492 -39995159 + L1_Mus2 LINE L1 5940 6560 -6 3 1006 12661 142 36 14 chr17 55277528 55281009 -39991642 + Lx4A LINE L1 3487 7054 -4 3 1006 4430 52 7 2 chr17 55281012 55281573 -39991078 + L1Md_F2 LINE L1 6018 6581 -1 3 1006 30 93 0 0 chr17 55281573 55281659 -39990992 + AT_rich Low_complexity Low_complexity 1 86 0 3 1006 1212 48 0 0 chr17 55281659 55281804 -39990847 - B1_Mm SINE Alu -1 146 2 3 1006 329 346 86 54 chr17 55281814 55282223 -39990428 + L1MB4 LINE L1 4354 4775 -1371 3 1006 195 42 0 0 chr17 55283098 55283122 -39989529 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 1006 274 321 76 13 chr17 55283329 55283408 -39989243 + B4A SINE B4 2 85 -207 3 1006 238 296 61 53 chr17 55283408 55283461 -39989190 + BC1_Mm scRNA scRNA 2 134 -18 3 1006 180 0 0 0 chr17 55283463 55283483 -39989168 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 3 1006 230 118 39 0 chr17 55283638 55283689 -39988962 + (CAGAGA)n Simple_repeat Simple_repeat 6 58 0 3 1006 720 292 120 21 chr17 55283704 55284542 -39988109 + L1MB4 LINE L1 5004 5926 -254 3 1006 244 366 106 28 chr17 55285558 55285738 -39986913 + Charlie16a DNA MER1_type 146 339 -3 3 1006 378 141 0 56 chr17 55286084 55286174 -39986477 + Lx LINE L1 6565 6649 -5 3 1006 427 366 8 0 chr17 55286180 55286311 -39986340 - ID_B1 SINE B4 -12 212 81 3 1006 21 89 0 0 chr17 55286656 55286712 -39985939 + AT_rich Low_complexity Low_complexity 1 56 0 3 1006 1209 120 26 0 chr17 55286745 55286937 -39985714 + RLTR11B LTR ERVK 1 197 -256 3 1006 7615 5 0 0 chr17 55286940 55288083 -39984568 - L1Md_A LINE L1 -117 6465 5323 3 1006 996 31 0 0 chr17 55288083 55288211 -39984440 + L1Md_A LINE L1 6455 6582 0 3 1006 1357 168 19 33 chr17 55288217 55288488 -39984163 + RLTR11B LTR ERVK 187 453 0 3 1006 554 257 21 35 chr17 55288495 55288640 -39984011 - Lx7 LINE L1 -1954 5742 5600 3 1006 213 351 13 51 chr17 55288696 55288774 -39983877 - RSINE1 SINE B4 -6 159 85 3 1006 5869 91 14 1 chr17 55288778 55290199 -39982452 + L1VL2 LINE L1 144 1578 -2037 3 1006 1479 95 43 0 chr17 55290198 55290430 -39982221 + L1VL2 LINE L1 1805 2046 -1569 3 1006 13364 51 6 3 chr17 55290488 55292977 -39979674 - L1Md_F3 LINE L1 0 6584 4085 3 1006 2957 158 52 25 chr17 55292977 55293746 -39978905 - RMER17A2 LTR ERVK -25 784 1 3 1006 783 0 0 0 chr17 55293957 55294044 -39978607 + (TTC)n Simple_repeat Simple_repeat 2 88 0 3 1006 244 305 4 14 chr17 55294047 55294127 -39978524 - ID4 SINE ID -2 81 1 3 1006 1598 214 123 8 chr17 55294172 55294531 -39978120 + MTD LTR MaLR 14 413 -6 3 1006 514 200 171 29 chr17 55295497 55295667 -39976984 - RMER1C Other Other -227 1115 922 3 1006 512 226 103 0 chr17 55296280 55296426 -39976225 + Lx9 LINE L1 7283 7443 -201 3 1006 320 204 44 22 chr17 55296453 55296588 -39976063 + Lx9 LINE L1 7507 7644 0 3 1006 2629 13 0 0 chr17 55298130 55298441 -39974210 + L1Md_T LINE L1 5276 5586 -297 3 1006 8428 37 0 0 chr17 55298441 55299435 -39973216 + L1Md_T LINE L1 5587 6580 -2 3 1006 384 269 96 34 chr17 55300042 55300188 -39972463 + MLT1F2 LTR MaLR 46 200 -360 3 1006 336 293 165 44 chr17 55300249 55300460 -39972191 + MLT1F2 LTR MaLR 316 645 -8 3 1006 11560 147 11 15 chr17 55300537 55302152 -39970499 - Lx2 LINE L1 -749 6248 4638 3 1006 212 0 36 0 chr17 55302152 55302180 -39970471 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 3 1006 11560 152 14 15 chr17 55302180 55303120 -39969531 - Lx2 LINE L1 -1240 4637 3694 3 1006 8230 2 2 0 chr17 55303115 55304071 -39968580 - L1Md_A LINE L1 0 6582 5625 3 1006 461 81 0 26 chr17 55304064 55304140 -39968511 - Lx2 LINE L1 -2184 3693 3620 3 1006 4413 129 13 48 chr17 55304145 55304896 -39967755 + Lx2 LINE L1 6273 6997 0 4 1006 222 102 0 63 chr17 55304928 55304991 -39967660 + A-rich Low_complexity Low_complexity 2 60 0 4 1006 1142 206 126 117 chr17 55305154 55305566 -39967085 - MTD LTR MaLR -3 416 1 4 1006 639 60 0 0 chr17 55305967 55306051 -39966600 + (TCC)n Simple_repeat Simple_repeat 3 86 0 4 1006 463 316 68 48 chr17 55307214 55307420 -39965231 + B4A SINE B4 6 215 -77 4 1006 836 259 73 0 chr17 55307408 55307613 -39965038 + RMER13A LTR ERVK 641 860 0 4 1006 231 153 71 0 chr17 55307613 55307698 -39964953 + (TCTG)n Simple_repeat Simple_repeat 2 92 0 4 1006 447 52 0 0 chr17 55307701 55307759 -39964892 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 1006 7629 62 10 0 chr17 55308031 55309491 -39963160 - L1_Mus1 LINE L1 0 6567 5099 4 1006 1066 92 0 0 chr17 55310051 55310204 -39962447 - L1_Mus1 LINE L1 -789 5094 4942 4 1006 210 257 197 14 chr17 55310565 55310636 -39962015 + PB1D10 SINE Alu 1 84 -33 4 1006 216 0 0 0 chr17 55311267 55311291 -39961360 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1006 1017 67 0 0 chr17 55311381 55311515 -39961136 + (CTCTG)n Simple_repeat Simple_repeat 4 137 0 4 1006 670 302 0 11 chr17 55312173 55312357 -39960294 + B3A SINE B2 1 182 -16 4 125 180 179 0 0 chr17 55312361 55312400 -39960251 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1007 36722 9 0 1 chr17 55312893 55318663 -39953988 + L1Md_A LINE L1 1 5586 -297 4 1007 9044 3 0 0 chr17 55318663 55319659 -39952992 + L1Md_A LINE L1 5587 6582 0 4 1007 690 292 19 63 chr17 55319790 55319995 -39952656 + B3A SINE B2 20 215 -1 4 1007 341 278 59 21 chr17 55320147 55320386 -39952265 - L1MB3 LINE L1 -90 6093 5846 4 1007 696 83 0 0 chr17 55320858 55320954 -39951697 + (TTTC)n Simple_repeat Simple_repeat 3 98 0 4 1007 367 210 37 42 chr17 55320956 55321145 -39951506 - RMER17C LTR ERVK -135 275 88 4 1007 968 294 133 3 chr17 55321388 55321757 -39950894 + MTD LTR MaLR 3 419 0 4 1007 23 86 0 0 chr17 55321760 55321818 -39950833 + AT_rich Low_complexity Low_complexity 1 58 0 4 1007 318 291 25 0 chr17 55322457 55322536 -39950115 - ID4 SINE ID -2 81 1 4 1007 553 241 140 97 chr17 55322822 55323029 -39949622 + RLTR25A LTR ERVK 1 216 -887 4 1007 10944 58 2 1 chr17 55323030 55324484 -39948167 + L1Md_F2 LINE L1 4131 5586 -297 4 1007 8041 48 5 2 chr17 55324484 55325477 -39947174 + L1Md_F2 LINE L1 5587 6582 0 4 1007 2630 173 33 2 chr17 55325488 55325945 -39946706 + RLTR25A LTR ERVK 201 671 -432 4 1007 342 45 0 0 chr17 55326038 55326082 -39946569 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 4 1007 1067 83 0 0 chr17 55326085 55326217 -39946434 - B1_Mus2 SINE Alu -14 133 2 4 1007 270 238 0 31 chr17 55326219 55326284 -39946367 + RLTR20B3 LTR ERVK 94 156 -404 4 1007 3628 241 36 89 chr17 55326285 55327193 -39945458 - RMER13A LTR ERVK 0 860 1 4 1007 1228 229 52 33 chr17 55327193 55327499 -39945152 + RLTR20B3 LTR ERVK 165 471 -106 4 1007 396 0 0 0 chr17 55327499 55327543 -39945108 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1007 414 0 0 0 chr17 55327543 55327588 -39945063 + (GA)n Simple_repeat Simple_repeat 1 46 0 4 1007 1228 229 52 33 chr17 55327588 55327642 -39945009 + RLTR20B3 LTR ERVK 472 531 -46 4 1007 7271 75 9 15 chr17 55328601 55329602 -39943049 + L1Md_F2 LINE L1 5588 6582 0 4 1007 1473 208 51 21 chr17 55329605 55330129 -39942522 + MYSERV16_I-int LTR ERVK 216 792 -1534 4 1007 3563 130 6 9 chr17 55330132 55330761 -39941890 - L1_Mur2 LINE L1 -1534 4343 3717 4 1007 5334 142 26 3 chr17 55330763 55331691 -39940960 + Lx LINE L1 5706 6654 0 4 1007 4678 157 47 21 chr17 55331705 55332503 -39940148 + MYSERV16_I-int LTR ERVK 796 1731 -595 4 1007 396 0 0 0 chr17 55332503 55332547 -39940104 + (TAA)n Simple_repeat Simple_repeat 2 45 0 4 1007 4678 153 50 7 chr17 55332547 55332868 -39939783 + MYSERV16_I-int LTR ERVK 1732 2070 -256 4 1007 313 282 92 22 chr17 55332869 55333054 -39939597 - L1M2 LINE L1 -799 5498 5301 4 1007 952 189 47 28 chr17 55333080 55333292 -39939359 - B3 SINE B2 0 216 1 4 1007 8629 159 14 5 chr17 55333360 55335734 -39936917 - Lx LINE L1 -21 6633 4235 4 1007 27 0 0 0 chr17 55335771 55335798 -39936853 + AT_rich Low_complexity Low_complexity 1 27 0 4 1007 572 78 20 0 chr17 55336623 55336725 -39935926 - L1Md_F3 LINE L1 -2 6582 6479 4 1007 189 0 0 0 chr17 55337291 55337312 -39935339 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1007 1149 95 0 0 chr17 55337312 55337459 -39935192 - B1_Mus2 SINE Alu 0 147 1 4 1007 1006 309 74 65 chr17 55337708 55338799 -39933852 - Lx8 LINE L1 -1081 6392 5228 4 1007 1014 185 29 24 chr17 55338799 55339009 -39933642 - B3 SINE B2 -4 212 2 4 1007 1006 295 72 82 chr17 55339009 55339448 -39933203 - Lx8 LINE L1 -620 5227 4814 4 1007 206 32 32 0 chr17 55339468 55339499 -39933152 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 4 1007 1671 300 97 67 chr17 55339569 55340059 -39932592 - L1_Mur3 LINE L1 -1704 4176 3708 4 1007 345 47 0 0 chr17 55340059 55340102 -39932549 + (TCC)n Simple_repeat Simple_repeat 2 44 0 4 1007 1671 300 97 67 chr17 55340102 55341590 -39931061 - L1_Mur3 LINE L1 -2173 3707 2139 4 1007 521 308 12 93 chr17 55341774 55341935 -39930716 - RSINE1 SINE B4 0 165 18 4 1007 222 412 0 0 chr17 55341866 55341946 -39930705 - B3 SINE B2 -131 85 6 4 1007 351 287 54 10 chr17 55341959 55342163 -39930488 + L1M4 LINE L1 5071 5283 -863 4 1007 6755 133 14 10 chr17 55342157 55343980 -39928671 - L1_Mus4 LINE L1 -7 6629 4804 4 1007 4573 88 17 11 chr17 55343978 55345274 -39927377 - L1VL2 LINE L1 -2011 1604 291 4 1007 3820 164 30 4 chr17 55345281 55346104 -39926547 - L1_Mur1 LINE L1 -4496 1390 543 4 1007 1273 209 34 28 chr17 55346104 55346435 -39926216 + ORR1A4-int LTR MaLR 32 348 -1615 4 1007 3125 134 33 31 chr17 55346435 55347014 -39925637 - Lx3_Mus LINE L1 -440 6569 5990 4 1007 3072 78 40 2 chr17 55347015 55347422 -39925229 + Lx3_Mus LINE L1 6569 6988 -21 4 1007 213 39 0 0 chr17 55347422 55347448 -39925203 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 4 1007 3072 78 40 2 chr17 55347448 55347464 -39925187 + Lx3_Mus LINE L1 6989 7007 -2 4 1007 7322 166 24 152 chr17 55347465 55348043 -39924608 + ORR1A4-int LTR MaLR 342 788 -1175 4 1007 1937 141 10 25 chr17 55348043 55348357 -39924294 + RLTR27 LTR ERVK 1 309 0 4 1007 7322 166 24 152 chr17 55348357 55349639 -39923012 + ORR1A4-int LTR MaLR 789 1963 0 4 1007 953 143 350 85 chr17 55349639 55349899 -39922752 + ORR1A4 LTR MaLR 1 329 0 4 1007 183 80 0 0 chr17 55350087 55350112 -39922539 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 1007 7389 64 7 1 chr17 55350226 55351397 -39921254 + L1_Mus1 LINE L1 5389 6565 -2 4 1007 599 309 0 0 chr17 55352062 55352188 -39920463 - RSINE1 SINE B4 -21 144 19 4 1007 964 255 111 10 chr17 55354217 55354535 -39918116 - MTD LTR MaLR -21 398 32 4 1007 459 92 0 0 chr17 55354535 55354600 -39918051 + (TA)n Simple_repeat Simple_repeat 2 66 0 4 1007 302 198 71 36 chr17 55354600 55354615 -39918036 - MTD LTR MaLR -390 31 15 4 1007 2846 203 41 43 chr17 55355011 55356167 -39916484 + L1_Mur3 LINE L1 894 2043 -3834 4 1007 903 312 77 49 chr17 55356545 55356973 -39915678 - RLTR26 LTR ERVK -5 637 198 4 1007 1123 133 0 41 chr17 55356973 55357063 -39915588 + ETnERV3-int LTR ERVK 5593 5682 -126 4 1007 2528 148 33 37 chr17 55357063 55357547 -39915104 + RLTR45 LTR ERVK 1 482 0 4 1007 1123 133 0 41 chr17 55357547 55357652 -39914999 + ETnERV3-int LTR ERVK 5683 5780 -28 4 1007 2168 219 135 75 chr17 55357673 55358515 -39914136 + RLTR13D6 LTR ERVK 10 902 0 4 1007 351 250 135 43 chr17 55358515 55358655 -39913996 - RMER13B LTR ERVK -753 155 1 4 1007 2224 178 52 8 chr17 55358659 55359307 -39913344 - MERVK26-int LTR ERVK -3 6916 6210 4 1007 1319 116 248 71 chr17 55359307 55359584 -39913067 - ORR1A2 LTR MaLR 0 326 1 4 1007 615 188 18 0 chr17 55359584 55359696 -39912955 - MERVK26-int LTR ERVK -705 6214 6101 4 1007 10118 198 12 11 chr17 55359696 55360684 -39911967 - MERVK26-int LTR ERVK -4248 2671 1675 4 1007 1247 45 0 22 chr17 55360684 55360867 -39911784 + (GA)n Simple_repeat Simple_repeat 2 180 0 4 1007 10118 198 12 11 chr17 55360867 55361908 -39910743 - MERVK26-int LTR ERVK -5245 1674 641 4 1007 2594 164 36 20 chr17 55361922 55362421 -39910230 - MERVK26-int LTR ERVK -6252 667 161 4 1007 1361 242 89 62 chr17 55362532 55363017 -39909634 - RLTR26 LTR ERVK -7 635 138 4 1007 238 218 0 35 chr17 55363067 55363124 -39909527 - RMER13A LTR ERVK -805 55 1 4 1007 2320 111 9 9 chr17 55364122 55364467 -39908184 + Lx LINE L1 6310 6654 0 4 1007 733 239 0 0 chr17 55364488 55364630 -39908021 - B1_Mus1 SINE Alu -1 147 6 4 1007 1321 286 51 29 chr17 55364628 55364941 -39907710 - MTE-int LTR MaLR -110 1470 1149 4 1007 1468 168 42 48 chr17 55364941 55365272 -39907379 - ORR1A4 LTR MaLR 0 329 1 4 1007 1321 286 51 29 chr17 55365272 55365368 -39907283 - MTE-int LTR MaLR -432 1148 1052 4 1007 279 0 0 0 chr17 55365413 55365444 -39907207 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1007 378 298 0 83 chr17 55365447 55365579 -39907072 - MTEa LTR MaLR -38 341 221 4 1007 2041 208 34 75 chr17 55365645 55366202 -39906449 + RLTR20B3 LTR ERVK 1 534 -43 4 1007 180 111 0 0 chr17 55366209 55366236 -39906415 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 4 1007 285 278 83 0 chr17 55366426 55366498 -39906153 + B1F2 SINE Alu 6 83 -66 4 1007 232 158 17 17 chr17 55366854 55366912 -39905739 + GA-rich Low_complexity Low_complexity 3 60 0 4 1007 284 57 0 0 chr17 55367379 55367414 -39905237 + U2 snRNA snRNA 1 35 -153 4 1007 200 151 11 65 chr17 55367437 55367529 -39905122 + (TTTG)n Simple_repeat Simple_repeat 2 88 0 4 1007 363 272 12 63 chr17 55367894 55368052 -39904599 - MLT1E2 LTR MaLR -2 651 504 4 1007 24 0 0 0 chr17 55368290 55368314 -39904337 + AT_rich Low_complexity Low_complexity 1 24 0 4 1007 241 337 43 0 chr17 55368385 55368477 -39904174 - MIRb SINE MIR -96 172 77 4 1007 1979 218 209 49 chr17 55368784 55369263 -39903388 + Lx9 LINE L1 6649 7154 -490 4 1007 2890 58 0 0 chr17 55369263 55369609 -39903042 - ORR1A1 LTR MaLR 0 346 1 4 1007 1979 218 209 49 chr17 55369609 55369980 -39902671 + Lx9 LINE L1 7155 7635 -9 4 1007 7717 62 1 2 chr17 55371203 55372484 -39900167 - L1_Mus1 LINE L1 -3 6564 5289 4 1007 1485 197 39 39 chr17 55372988 55373056 -39899595 - MTC LTR MaLR -5 416 348 4 1007 379 0 19 19 chr17 55373056 55373108 -39899543 + (TTTTG)n Simple_repeat Simple_repeat 1 52 0 4 1007 1485 197 39 39 chr17 55373108 55373346 -39899305 - MTC LTR MaLR -74 347 111 4 1007 471 336 35 12 chr17 55374055 55374314 -39898337 - RodERV21-int LTR ERV1 -204 4787 4523 4 1007 8303 125 40 6 chr17 55375405 55377615 -39895036 - L1_Mus3 LINE L1 -7 6631 4334 4 1007 3626 107 10 3 chr17 55377611 55378204 -39894447 - L1_Mus3 LINE L1 -3284 2599 2003 4 1007 3907 290 57 32 chr17 55378429 55379930 -39892721 - RodERV21-int LTR ERV1 -2329 2662 1124 4 1007 421 302 73 39 chr17 55379985 55380219 -39892432 - RodERV21-int LTR ERV1 -3856 1135 894 4 1007 6072 147 16 16 chr17 55380249 55381280 -39891371 + Lx3B LINE L1 5944 6973 0 4 1007 385 321 13 0 chr17 55381285 55381444 -39891207 - RodERV21-int LTR ERV1 -4102 889 729 4 1007 483 242 6 61 chr17 55381537 55381700 -39890951 - RMER17C-int LTR ERVK -2779 459 306 4 1007 334 282 9 26 chr17 55382374 55382487 -39890164 - Tigger5 DNA MER2_type -124 2282 2172 4 1007 369 321 42 77 chr17 55382489 55382749 -39889902 - Tigger5 DNA MER2_type -2150 256 6 4 1007 633 320 88 9 chr17 55383754 55383981 -39888670 + B4 SINE B4 22 266 -26 4 1007 4153 133 52 104 chr17 55384090 55384541 -39888110 + L1_Mur1 LINE L1 430 869 -6115 4 1007 1902 79 0 15 chr17 55384541 55384811 -39887840 + L1Md_F2 LINE L1 6311 6576 -6 4 1007 8805 122 22 34 chr17 55384811 55386741 -39885910 + L1_Mur1 LINE L1 870 2759 -3127 4 1007 218 297 8 92 chr17 55388352 55388386 -39884265 - B4A SINE B4 -83 209 91 4 1007 368 211 135 10 chr17 55388386 55388482 -39884169 - B1_Mus2 SINE Alu -34 113 6 5 1007 444 200 0 0 chr17 55388848 55388943 -39883708 + A-rich Low_complexity Low_complexity 1 95 0 5 1007 1736 121 91 12 chr17 55388943 55389075 -39883576 + Lx3_Mus LINE L1 2744 2871 -3015 5 1007 423 0 0 0 chr17 55389075 55389122 -39883529 + (GA)n Simple_repeat Simple_repeat 1 47 0 5 1007 1736 121 91 12 chr17 55389122 55389308 -39883343 + Lx3_Mus LINE L1 2872 3086 -2800 5 1007 3874 98 7 3 chr17 55389306 55389953 -39882698 + Lx3_Mus LINE L1 5317 5955 -1026 5 1007 4174 164 74 8 chr17 55389962 55390836 -39881815 + Lx3_Mus LINE L1 6071 7002 -7 5 1007 24 32 0 0 chr17 55390855 55390886 -39881765 + AT_rich Low_complexity Low_complexity 1 31 0 5 1007 223 115 0 55 chr17 55390948 55391003 -39881648 + A-rich Low_complexity Low_complexity 1 52 0 5 1007 370 340 77 0 chr17 55391239 55391395 -39881256 + MIR SINE MIR 81 248 -14 5 1007 1685 263 46 13 chr17 55393770 55394228 -39878423 + RCHARR1 DNA MER1_type 25 497 -477 5 1007 530 295 16 16 chr17 55394229 55394353 -39878298 + RSINE1 SINE B4 4 127 -38 5 1007 844 80 22 33 chr17 55394399 55394581 -39878070 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 5 1007 1177 259 121 21 chr17 55394601 55395023 -39877628 + RCHARR1 DNA MER1_type 478 941 -33 5 1007 663 121 37 29 chr17 55395551 55395687 -39876964 + L1Md_F2 LINE L1 6445 6581 -1 5 1007 1294 48 0 0 chr17 55395703 55395868 -39876783 + MTB LTR MaLR 182 346 -54 5 1007 425 252 25 50 chr17 55395878 55395999 -39876652 + ORR1E LTR MaLR 19 136 -223 5 1007 855 284 62 108 chr17 55396249 55396481 -39876170 - MTE2a LTR MaLR -5 374 171 5 1007 2039 152 24 8 chr17 55396481 55396852 -39875799 - Lx LINE L1 -13 6641 6265 5 1007 855 284 62 108 chr17 55396852 55397009 -39875642 - MTE2a LTR MaLR -209 170 3 5 1007 720 107 0 0 chr17 55397530 55397642 -39875009 + (TG)n Simple_repeat Simple_repeat 2 113 0 5 1007 621 100 0 0 chr17 55398248 55398338 -39874313 + (CA)n Simple_repeat Simple_repeat 1 90 0 5 1007 3232 163 20 16 chr17 55398353 55398433 -39874218 - RLTR20A2 LTR ERVK -12 566 488 5 1007 489 17 0 0 chr17 55398433 55398491 -39874160 + (CA)n Simple_repeat Simple_repeat 2 59 0 5 1007 3232 163 20 16 chr17 55398491 55398971 -39873680 - RLTR20A2 LTR ERVK -91 487 5 5 1007 630 49 0 0 chr17 55398971 55399053 -39873598 + (CA)n Simple_repeat Simple_repeat 2 83 0 5 1007 824 184 7 0 chr17 55399214 55399355 -39873296 - B1_Mus1 SINE Alu -5 143 2 5 1007 1241 77 66 6 chr17 55399447 55399629 -39873022 + B2_Mm2 SINE B2 2 194 -1 5 1007 246 376 40 0 chr17 55399680 55399781 -39872870 + PB1D10 SINE Alu 13 117 0 5 1007 1864 248 46 23 chr17 55400392 55400870 -39871781 - Lx5 LINE L1 -12 7038 6550 5 1007 1385 233 25 22 chr17 55400931 55401255 -39871396 + ORR1D1 LTR MaLR 1 325 -49 5 1007 2075 186 88 0 chr17 55401591 55401978 -39870673 + MTC LTR MaLR 1 421 0 5 1007 1381 278 20 20 chr17 55402015 55402315 -39870336 - MT2A LTR ERVL -79 454 149 5 1007 5228 161 9 26 chr17 55402315 55403233 -39869418 + RMER19B LTR ERVK 1 902 0 5 1007 1381 278 20 20 chr17 55403233 55403277 -39869374 - MT2A LTR ERVL -385 148 110 5 1007 655 191 0 16 chr17 55403294 55403422 -39869229 - MT2A LTR ERVL -407 126 1 5 1007 22 70 0 0 chr17 55404365 55404408 -39868243 + AT_rich Low_complexity Low_complexity 1 43 0 5 1007 187 171 0 47 chr17 55404721 55404764 -39867887 - L3 LINE CR1 -1751 2738 2698 5 1007 24 0 0 0 chr17 55404799 55404823 -39867828 + AT_rich Low_complexity Low_complexity 1 24 0 5 1007 833 136 0 6 chr17 55405084 55405240 -39867411 - Lx2A1 LINE L1 0 7008 6854 5 1007 1217 143 55 34 chr17 55405240 55405478 -39867173 + Lx2A1 LINE L1 6463 6705 -303 5 1007 237 316 66 0 chr17 55407445 55407521 -39865130 - ID2 SINE ID -2 81 1 5 1007 222 37 0 0 chr17 55408213 55408240 -39864411 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1007 190 286 14 54 chr17 55408938 55409012 -39863639 + L3 LINE CR1 857 927 -3562 5 1007 2146 201 44 58 chr17 55409374 55409632 -39863019 - RLTR31_Mm LTR ERVK 0 561 319 5 1007 396 0 0 0 chr17 55409632 55409676 -39862975 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 1007 2146 201 44 58 chr17 55409676 55409986 -39862665 - RLTR31_Mm LTR ERVK -243 318 3 5 1007 22803 34 5 10 chr17 55410010 55413723 -39858928 + L1Md_T LINE L1 422 4108 -1775 5 1007 3846 25 0 0 chr17 55413721 55414192 -39858459 + L1Md_T LINE L1 5116 5586 -297 5 1007 8388 38 0 0 chr17 55414192 55415188 -39857463 + L1Md_T LINE L1 5587 6582 0 5 1007 324 0 0 0 chr17 55415763 55415799 -39856852 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1007 216 292 0 0 chr17 55416039 55416087 -39856564 + MER91C DNA Tip100 82 129 -11 5 1007 656 122 8 0 chr17 55416093 55416216 -39856435 + (TC)n Simple_repeat Simple_repeat 1 124 0 5 1007 1770 267 35 25 chr17 55416318 55416882 -39855769 - Lx9 LINE L1 -172 7472 6903 5 1007 536 296 29 15 chr17 55417034 55417171 -39855480 - B3A SINE B2 -53 145 7 5 1007 2416 221 50 48 chr17 55417200 55417884 -39854767 - Lx7 LINE L1 0 7696 7012 5 1007 3529 228 24 45 chr17 55417904 55418786 -39853865 - Lx5 LINE L1 -3 7047 6185 5 1007 339 361 117 19 chr17 55418992 55419249 -39853402 + MLT2F LTR ERVL 190 471 -192 5 1007 236 250 17 0 chr17 55421131 55421191 -39851460 + CT-rich Low_complexity Low_complexity 2 62 0 5 1007 329 264 78 14 chr17 55422756 55422898 -39849753 + Lx9 LINE L1 6339 6489 -1155 5 1007 447 19 0 0 chr17 55423448 55423500 -39849151 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1007 468 0 0 0 chr17 55423500 55423551 -39849100 + (GA)n Simple_repeat Simple_repeat 1 52 0 5 1007 265 260 103 12 chr17 55424234 55424325 -39848326 + B1F1 SINE Alu 13 111 -9 5 1007 232 212 30 0 chr17 55425748 55425814 -39846837 + L1MD LINE L1 5228 5295 -851 5 1007 441 0 0 0 chr17 55425860 55425909 -39846742 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1007 363 309 71 22 chr17 55426023 55426248 -39846403 + L1MB4 LINE L1 5535 5770 -410 5 1007 391 340 29 17 chr17 55426304 55426543 -39846108 + L1MB4 LINE L1 5857 6098 -82 5 1007 1526 190 47 30 chr17 55427697 55428161 -39844490 - RMER20A LTR ERVK -6 510 1 5 1007 389 285 24 8 chr17 55429650 55429774 -39842877 + GA-rich Low_complexity Low_complexity 2 127 0 5 1007 248 120 20 0 chr17 55429940 55429990 -39842661 + (TCTA)n Simple_repeat Simple_repeat 3 53 0 5 1007 213 121 0 0 chr17 55429999 55430032 -39842619 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1007 192 158 0 0 chr17 55430551 55430589 -39842062 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 1007 772 29 0 19 chr17 55430833 55430938 -39841713 + (TG)n Simple_repeat Simple_repeat 1 103 0 5 1007 24 0 0 0 chr17 55431075 55431099 -39841552 + AT_rich Low_complexity Low_complexity 1 24 0 5 1007 305 229 169 0 chr17 55431648 55431731 -39840920 - LTR31 LTR ERV1 -306 313 217 5 1007 24 0 0 0 chr17 55431953 55431977 -39840674 + AT_rich Low_complexity Low_complexity 1 24 0 5 1007 511 321 40 45 chr17 55432342 55432564 -39840087 + Tigger5 DNA MER2_type 45 265 -2141 5 1007 21 71 0 0 chr17 55432945 55432987 -39839664 + AT_rich Low_complexity Low_complexity 1 42 0 5 1007 306 328 34 116 chr17 55433058 55433265 -39839386 - MLT2B4 LTR ERVL -361 195 6 5 1007 306 235 197 0 chr17 55434636 55434768 -39837883 - MER2 DNA MER2_type -127 218 61 5 1007 1028 277 82 48 chr17 55435551 55435907 -39836744 + MTEa LTR MaLR 12 379 0 5 1007 384 82 0 0 chr17 55436450 55436511 -39836140 + (CAGA)n Simple_repeat Simple_repeat 4 64 0 5 1007 486 0 0 0 chr17 55436513 55436567 -39836084 + (TGAA)n Simple_repeat Simple_repeat 2 55 0 5 1007 4119 162 23 27 chr17 55436697 55436750 -39835901 + Lx LINE L1 5060 5112 -771 5 1007 1321 91 0 16 chr17 55436750 55436939 -39835712 + B2_Mm2 SINE B2 1 186 -9 5 1007 5036 124 14 11 chr17 55436939 55438144 -39834507 + Lx LINE L1 5113 6316 -338 5 1007 327 305 26 71 chr17 55438342 55438455 -39834196 + PB1D10 SINE Alu 5 112 -5 5 1007 6571 60 10 47 chr17 55439065 55440066 -39832585 + L1Md_A LINE L1 381 1344 -5380 5 125 14037 20 1 0 chr17 55442664 55444302 -39828349 + L1Md_A LINE L1 3945 5584 -299 5 1008 8235 37 1 3 chr17 55444304 55445302 -39827349 + L1Md_A LINE L1 5587 6582 0 5 1008 32 26 0 0 chr17 55445328 55445367 -39827284 + AT_rich Low_complexity Low_complexity 1 39 0 5 1008 1231 177 33 72 chr17 55446064 55446399 -39826252 + RLTRETN_Mm LTR ERVK 1 322 0 5 1008 2284 120 0 0 chr17 55446450 55446776 -39825875 - ORR1A2 LTR MaLR 0 327 2 5 1008 7614 73 3 1 chr17 55446819 55448119 -39824532 - L1_Mus2 LINE L1 0 6566 5264 5 1008 232 31 0 0 chr17 55448119 55448151 -39824500 + B3 SINE B2 7 38 -178 5 1008 546 335 70 33 chr17 55448326 55448567 -39824084 - MLT1E1 LTR MaLR -2 652 403 5 1008 2771 233 40 47 chr17 55449060 55450179 -39822472 + Lx2A1 LINE L1 6405 7005 -3 5 1008 661 285 45 38 chr17 55450178 55450524 -39822127 + L1_Rod LINE L1 3303 3668 -2475 5 1008 328 40 20 20 chr17 55450524 55450575 -39822076 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 1008 327 339 65 42 chr17 55450575 55450612 -39822039 + L1_Rod LINE L1 3669 3712 -2431 5 1008 677 276 89 26 chr17 55450608 55450910 -39821741 + Lx9 LINE L1 4633 4953 -894 5 1008 2051 228 128 41 chr17 55450927 55451806 -39820845 + Lx9 LINE L1 5274 6310 -1334 5 1008 423 0 0 0 chr17 55451806 55451853 -39820798 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1008 1633 269 188 52 chr17 55451853 55452295 -39820356 + Lx9 LINE L1 6311 6801 -843 5 1008 1612 243 75 30 chr17 55452295 55452736 -39819915 - RLTR20B1 LTR ERVK 0 563 103 5 1008 1390 313 73 29 chr17 55452854 55453515 -39819136 + Lx9 LINE L1 6814 7503 -141 5 1008 23 33 0 0 chr17 55453621 55453651 -39819000 + AT_rich Low_complexity Low_complexity 1 30 0 5 1008 436 350 38 6 chr17 55454051 55454209 -39818442 - B3A SINE B2 -33 165 3 5 1008 188 327 19 0 chr17 55454932 55454984 -39817667 + L2c LINE L2 3258 3310 -77 5 1008 7860 174 19 68 chr17 55455441 55457415 -39815236 - Lx LINE L1 0 6654 4666 5 1008 1154 102 0 6 chr17 55457415 55457592 -39815059 + (TTC)n Simple_repeat Simple_repeat 2 177 0 5 1008 7860 188 17 131 chr17 55457592 55457639 -39815012 - Lx LINE L1 -1212 4665 4617 5 1008 1334 45 6 0 chr17 55457639 55457816 -39814835 - L1Md_F3 LINE L1 -15 6569 6392 5 1008 7860 188 17 131 chr17 55457816 55458232 -39814419 - Lx LINE L1 -1261 4616 4272 5 1008 225 308 26 61 chr17 55458232 55458346 -39814305 - MLT1E1 LTR MaLR -333 321 212 5 1008 7860 188 17 131 chr17 55458346 55458933 -39813718 - Lx LINE L1 -1261 4271 3783 5 1008 1364 217 89 23 chr17 55459662 55460011 -39812640 - ORR1D1 LTR MaLR -2 372 1 5 1008 357 174 0 0 chr17 55462380 55462449 -39810202 + CT-rich Low_complexity Low_complexity 2 70 0 5 1008 491 314 138 52 chr17 55462477 55462803 -39809848 - MLT2C1 LTR ERVL -43 354 1 5 1008 237 336 23 85 chr17 55462931 55463061 -39809590 - MLT1A1 LTR MaLR -19 389 268 5 1008 493 232 53 53 chr17 55464264 55464396 -39808255 - ID_B1 SINE B4 0 224 93 5 1008 257 263 45 47 chr17 55464413 55464522 -39808129 - RMER4B LTR ERVK -54 531 366 5 1008 1039 269 111 43 chr17 55464498 55464921 -39807730 - RMER4B LTR ERVK -133 452 1 5 1008 315 171 114 0 chr17 55464923 55465011 -39807640 - Arthur1 DNA Tip100 -314 3633 3536 6 1008 1187 296 75 37 chr17 55465567 55465696 -39806955 - L1MB3 LINE L1 -29 6154 6023 6 1008 1734 223 11 16 chr17 55465696 55466065 -39806586 + ORR1B2 LTR MaLR 1 367 0 6 1008 1187 296 75 37 chr17 55466065 55466552 -39806099 - L1MB3 LINE L1 -161 6022 5515 6 1008 272 337 112 0 chr17 55466570 55466668 -39805983 + B4A SINE B4 10 118 -174 6 1008 257 216 0 0 chr17 55466850 55466901 -39805750 - L1MB3 LINE L1 -689 5482 5432 6 1008 255 189 0 0 chr17 55467547 55467600 -39805051 + (CACG)n Simple_repeat Simple_repeat 3 55 0 6 1008 396 258 186 28 chr17 55469072 55469363 -39803288 - Lx9 LINE L1 -1218 6426 6090 6 1008 4280 178 57 1 chr17 55469379 55470149 -39802502 - Lx LINE L1 -5 6649 5837 6 1008 7243 148 27 2 chr17 55470151 55471369 -39801282 + Lx LINE L1 4578 5826 -57 6 1008 314 217 0 0 chr17 55471544 55471604 -39801047 - URR1B DNA MER1_type -6 219 160 6 1008 807 318 57 68 chr17 55471605 55472077 -39800574 + RLTR12B LTR ERVK 25 491 -37 6 1008 327 85 0 0 chr17 55472141 55472188 -39800463 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1008 513 71 0 0 chr17 55472188 55472257 -39800394 + (TA)n Simple_repeat Simple_repeat 2 71 0 6 1008 593 197 181 0 chr17 55472269 55472396 -39800255 - URR1B DNA MER1_type -76 149 1 6 1008 2268 206 37 28 chr17 55472400 55472973 -39799678 - L1_Rod LINE L1 -3582 2265 1688 6 1008 215 209 16 0 chr17 55472973 55473102 -39799549 + (TAGA)n Simple_repeat Simple_repeat 2 132 0 6 1008 335 0 0 162 chr17 55473121 55473322 -39799329 + (AGTAG)n Simple_repeat Simple_repeat 1 168 0 6 1008 243 174 28 34 chr17 55473326 55473504 -39799147 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 6 1008 456 161 0 0 chr17 55473508 55473589 -39799062 + (TG)n Simple_repeat Simple_repeat 2 82 0 6 1008 6481 99 22 11 chr17 55473703 55474636 -39798015 - Lx LINE L1 0 6654 5711 6 1008 736 172 46 86 chr17 55474633 55474830 -39797821 - L1_Rod LINE L1 -4208 1639 1451 6 1008 851 206 71 43 chr17 55474826 55475080 -39797571 - L1_Rod LINE L1 -6332 1276 1016 6 1008 1844 275 78 0 chr17 55476025 55476473 -39796178 + Lx6 LINE L1 6904 7386 -74 6 1008 286 256 69 54 chr17 55476972 55477180 -39795471 + L1MD1 LINE L1 5088 5288 -858 6 1008 1463 253 35 9 chr17 55477168 55477507 -39795144 + Lx9 LINE L1 7089 7436 -208 6 1008 816 284 112 36 chr17 55477538 55478064 -39794587 + L1MD1 LINE L1 5297 5862 -380 6 1008 244 312 59 59 chr17 55478080 55478199 -39794452 + Lx7 LINE L1 7024 7142 -554 6 1008 27984 97 33 57 chr17 55478618 55480506 -39792145 + L1Md_F2 LINE L1 395 2003 -3880 6 1008 1714 46 5 0 chr17 55480506 55480723 -39791928 + L1Md_T LINE L1 6364 6581 -1 6 1008 27984 76 26 81 chr17 55480723 55483922 -39788729 + L1Md_F2 LINE L1 2004 5243 -640 6 1008 194 62 31 0 chr17 55483922 55483954 -39788697 + (TA)n Simple_repeat Simple_repeat 1 33 0 6 1008 27984 76 26 81 chr17 55483954 55484296 -39788355 + L1Md_F2 LINE L1 5244 5585 -298 6 1008 7483 73 3 11 chr17 55484297 55485300 -39787351 + L1Md_F2 LINE L1 5587 6581 -1 6 1008 419 312 37 55 chr17 55485378 55485541 -39787110 - RMER15 LTR ERVL -45 530 371 6 1008 22 35 0 0 chr17 55485724 55485753 -39786898 + AT_rich Low_complexity Low_complexity 1 29 0 6 1008 5610 40 6 10 chr17 55486959 55487649 -39785002 - L1_Mus1 LINE L1 -1 6566 5880 6 1008 7897 96 4 19 chr17 55487649 55489885 -39782766 + L1_Mus1 LINE L1 4456 6567 0 6 1008 24 0 0 0 chr17 55489885 55489909 -39782742 + AT_rich Low_complexity Low_complexity 1 24 0 6 1008 269 242 16 0 chr17 55490098 55490160 -39782491 - RLTR19C LTR ERVK -409 97 35 6 1008 5110 42 10 0 chr17 55491392 55492018 -39780633 + L1Md_F3 LINE L1 5953 6584 0 6 1008 38 0 0 0 chr17 55492251 55492289 -39780362 + AT_rich Low_complexity Low_complexity 1 38 0 6 1008 23 78 0 0 chr17 55493248 55493299 -39779352 + AT_rich Low_complexity Low_complexity 1 51 0 6 1008 1648 270 22 22 chr17 55493331 55493744 -39778907 + MTD LTR MaLR 7 419 0 6 1008 25 31 0 0 chr17 55493888 55493920 -39778731 + AT_rich Low_complexity Low_complexity 1 32 0 6 1008 2920 58 39 5 chr17 55493925 55494308 -39778343 - MTA_Mm LTR MaLR 0 396 1 6 1008 1116 83 0 0 chr17 55494563 55494707 -39777944 + B1_Mus1 SINE Alu 5 148 0 6 1008 342 0 0 0 chr17 55495331 55495369 -39777282 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1008 1531 191 53 136 chr17 55495711 55496197 -39776454 + RLTR41 LTR ERV1 1 446 0 6 1008 570 89 0 0 chr17 55497344 55497434 -39775217 + (CA)n Simple_repeat Simple_repeat 2 91 0 6 1008 269 357 52 37 chr17 55497434 55497568 -39775083 - ORR1E LTR MaLR -223 136 1 6 1008 545 309 70 33 chr17 55498666 55498880 -39773771 + MTD LTR MaLR 29 250 -169 6 1008 253 150 83 0 chr17 55499937 55499997 -39772654 - RMER17C LTR ERVK -8 402 338 6 1008 1263 159 94 27 chr17 55500000 55500116 -39772535 - RMER17C LTR ERVK -77 333 220 1 1008 726 78 0 0 chr17 55500116 55500218 -39772433 + (GA)n Simple_repeat Simple_repeat 2 103 0 2 1008 1263 172 80 40 chr17 55500218 55500455 -39772196 - RMER17C LTR ERVK -552 406 16 1 1008 472 347 90 85 chr17 55501087 55501619 -39771032 - RLTR18 LTR ERVK -53 563 29 3 1008 862 267 27 6 chr17 55503292 55503517 -39769134 - MTD LTR MaLR -62 334 103 4 1008 8529 29 0 0 chr17 55503541 55504581 -39768070 + L1Md_T LINE L1 5587 6582 0 5 1008 454 234 83 9 chr17 55504581 55504689 -39767962 - MTD LTR MaLR -299 120 5 4 1008 22 56 0 0 chr17 55505165 55505201 -39767450 + AT_rich Low_complexity Low_complexity 1 36 0 6 1008 29 78 0 0 chr17 55505412 55505476 -39767175 + AT_rich Low_complexity Low_complexity 1 64 0 7 1008 376 324 86 75 chr17 55505712 55505979 -39766672 + L1MC4a LINE L1 6779 7048 -834 8 1008 22 80 0 0 chr17 55506174 55506224 -39766427 + AT_rich Low_complexity Low_complexity 1 50 0 9 1008 7396 61 4 4 chr17 55508418 55509354 -39763297 - L1_Mus1 LINE L1 -1 6566 5631 1 1008 2032 120 3 0 chr17 55509349 55509658 -39762993 + L1_Mm LINE L1 4856 5165 -718 1 1008 242 321 61 26 chr17 55510105 55510220 -39762431 + MIR3 SINE MIR 81 199 -9 1 1008 415 240 57 23 chr17 55510598 55510773 -39761878 - L1MC3 LINE L1 0 7785 7605 1 1008 412 335 44 28 chr17 55510784 55510965 -39761686 - MER2 DNA MER2_type -6 339 156 1 1008 244 220 0 0 chr17 55510985 55511035 -39761616 + Lx8 LINE L1 5856 5905 -1568 1 1008 427 331 67 31 chr17 55511274 55511467 -39761184 - MER2 DNA MER2_type -145 200 1 1 1008 418 252 77 58 chr17 55511467 55511623 -39761028 - L1MC3 LINE L1 -186 7599 7441 1 1008 493 299 77 10 chr17 55511664 55511860 -39760791 - L1MC3 LINE L1 -438 7347 7139 1 1008 486 250 16 41 chr17 55511886 55512007 -39760644 + RSINE1 SINE B4 23 140 -25 1 1008 300 53 0 0 chr17 55512029 55512067 -39760584 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 1008 330 26 0 0 chr17 55512067 55512106 -39760545 + (TAA)n Simple_repeat Simple_repeat 1 39 0 1 1008 1469 342 118 35 chr17 55512287 55513288 -39759363 - Lx8 LINE L1 -62 7411 6328 1 1008 564 327 50 49 chr17 55513767 55514114 -39758537 + MTEa LTR MaLR 1 344 -15 2 1008 2104 335 163 39 chr17 55514114 55515513 -39757138 + MTEa-int LTR MaLR 1 1573 -7 2 1008 194 108 54 0 chr17 55515716 55515753 -39756898 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 2 1008 234 115 16 32 chr17 55515796 55515859 -39756792 + (TTTG)n Simple_repeat Simple_repeat 2 63 0 2 1008 306 50 0 0 chr17 55516011 55516051 -39756600 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1008 38435 7 0 1 chr17 55516788 55522566 -39750085 + L1Md_A LINE L1 1 5586 -297 2 1008 9026 2 0 0 chr17 55522566 55523562 -39749089 + L1Md_A LINE L1 5587 6582 0 2 1008 11237 139 18 32 chr17 55523939 55525190 -39747461 + L1VL4 LINE L1 199 1444 -2115 2 1008 1122 75 0 0 chr17 55525190 55525337 -39747314 + B1_Mus2 SINE Alu 1 147 0 2 1008 11237 96 17 32 chr17 55525337 55526174 -39746477 + L1VL4 LINE L1 1445 2256 -1303 2 1008 728 42 10 0 chr17 55526174 55526270 -39746381 + (TAGA)n Simple_repeat Simple_repeat 2 98 0 2 1008 11237 96 17 32 chr17 55526270 55526698 -39745953 + L1VL4 LINE L1 2257 2677 -882 2 1008 565 274 31 62 chr17 55526701 55526932 -39745719 + MT2B LTR ERVL 316 544 -57 2 1008 547 172 24 6 chr17 55526934 55527098 -39745553 + (TA)n Simple_repeat Simple_repeat 1 167 0 2 1008 188 111 28 0 chr17 55527099 55527135 -39745516 + (GA)n Simple_repeat Simple_repeat 2 38 0 3 1008 305 164 0 52 chr17 55527137 55527195 -39745456 + MT2B LTR ERVL 530 584 0 2 1008 356 328 122 44 chr17 55528064 55528383 -39744268 + ORR1E LTR MaLR 4 347 -12 3 1008 318 390 61 79 chr17 55528705 55529034 -39743617 - LTR16E2 LTR ERVL -20 548 226 3 1008 300 313 36 0 chr17 55529045 55529128 -39743523 + MLT1A1 LTR MaLR 3 88 -320 3 1008 353 259 54 98 chr17 55529090 55529152 -39743499 + CYRA11_Mm Unknown Y-chromosome 116 306 -306 3 1008 812 153 0 7 chr17 55529152 55529290 -39743361 - URR1B DNA MER1_type 0 225 89 3 1008 1666 168 4 0 chr17 55529299 55529579 -39743072 - Lx5 LINE L1 -460 6590 6310 3 1008 367 274 0 45 chr17 55529584 55529672 -39742979 - URR1B DNA MER1_type -142 83 1 3 1008 21 57 0 0 chr17 55529930 55529965 -39742686 + AT_rich Low_complexity Low_complexity 1 35 0 3 1008 36773 30 2 7 chr17 55530115 55535313 -39737338 + L1Md_T LINE L1 422 5586 -297 3 1008 8329 38 0 1 chr17 55535313 55536309 -39736342 + L1Md_T LINE L1 5587 6581 -1 3 1008 373 155 318 12 chr17 55536951 55537036 -39735615 + PB1D9 SINE Alu 1 111 -9 3 1008 456 19 0 0 chr17 55537036 55537089 -39735562 + (GA)n Simple_repeat Simple_repeat 2 54 0 4 1008 216 182 23 0 chr17 55537091 55537122 -39735529 + A-rich Low_complexity Low_complexity 3 34 0 4 1008 1039 124 6 6 chr17 55537122 55537300 -39735351 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 4 1008 216 182 23 0 chr17 55537300 55537312 -39735339 + A-rich Low_complexity Low_complexity 35 46 0 4 1008 531 311 126 70 chr17 55538305 55538775 -39733876 - Kanga11a DNA Tc2 -279 691 196 4 1008 287 375 19 13 chr17 55538946 55539100 -39733551 + L1MEg LINE L1 93 247 -5837 4 1008 821 42 0 0 chr17 55539565 55539660 -39732991 + L1Md_F2 LINE L1 5491 5585 -298 4 1008 8114 47 1 0 chr17 55539661 55540644 -39732007 + L1Md_F2 LINE L1 5587 6570 -12 4 1008 3232 126 32 27 chr17 55541776 55542330 -39730321 - RLTR31B_Mm LTR ERVK 0 557 1 4 1008 1294 0 0 0 chr17 55543689 55543840 -39728811 - L1Md_A LINE L1 0 6582 6432 4 1008 235 236 0 14 chr17 55543980 55544053 -39728598 + (TTTG)n Simple_repeat Simple_repeat 2 73 0 4 1008 261 0 0 0 chr17 55544483 55544512 -39728139 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 5 1008 375 23 0 0 chr17 55545203 55545247 -39727404 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1008 689 296 113 39 chr17 55550748 55551190 -39721461 + L1MD LINE L1 4197 4671 -1475 5 1008 377 191 323 39 chr17 55551346 55551476 -39721175 + B3 SINE B2 42 208 -8 5 1008 471 279 130 0 chr17 55551558 55551719 -39720932 + B3A SINE B2 1 182 -16 5 1008 243 0 0 0 chr17 55552205 55552232 -39720419 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 1008 651 302 81 24 chr17 55552267 55552780 -39719871 - L1_Mur3 LINE L1 -10 5870 5355 5 1008 266 305 107 7 chr17 55552772 55553043 -39719608 - L1_Mur3 LINE L1 -2807 3336 3039 5 1008 1279 300 42 44 chr17 55553195 55553627 -39719024 - RMER15 LTR ERVL 0 575 145 5 1008 1336 91 5 20 chr17 55554273 55554476 -39718175 + L1Md_F2 LINE L1 6371 6570 -12 5 1008 468 317 56 69 chr17 55554750 55555143 -39717508 - MTEb LTR MaLR -3 376 5 5 1008 225 250 0 0 chr17 55555569 55555625 -39717026 - RMER21B LTR ERV1 -275 567 512 6 1008 449 302 29 29 chr17 55555870 55556044 -39716607 - MER82 DNA MER2_type -336 317 144 6 1008 30428 83 2 3 chr17 55556089 55561345 -39711306 + L1Md_F2 LINE L1 339 5585 -298 6 1008 7693 71 0 2 chr17 55561346 55562331 -39710320 + L1Md_F2 LINE L1 5587 6569 -13 6 1008 25 0 0 0 chr17 55562345 55562370 -39710281 + AT_rich Low_complexity Low_complexity 1 25 0 6 1008 414 353 60 39 chr17 55562446 55562729 -39709922 - MER119 DNA MER1_type -153 430 142 6 1008 948 160 115 43 chr17 55563309 55563518 -39709133 + URR1A DNA MER1_type 3 226 0 6 1008 1300 274 53 2 chr17 55563572 55563967 -39708684 - MTD LTR MaLR -2 417 3 6 1008 2094 245 116 36 chr17 55564087 55564841 -39707810 - RMER1C Other Other -1 1341 368 6 1008 288 0 0 0 chr17 55565365 55565397 -39707254 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 6 1008 6246 25 0 0 chr17 55565609 55566328 -39706323 - L1Md_T LINE L1 -1 6581 5863 6 1008 2108 8 0 0 chr17 55566328 55566574 -39706077 + L1Md_T LINE L1 5590 5835 -48 6 1008 588 218 8 46 chr17 55567255 55567385 -39705266 + B3A SINE B2 1 125 -73 7 1008 21 36 0 0 chr17 55567432 55567460 -39705191 + AT_rich Low_complexity Low_complexity 1 28 0 7 1008 2550 88 8 8 chr17 55567478 55567844 -39704807 - L1_Mus3 LINE L1 -3 6635 6270 7 1008 229 229 232 24 chr17 55568050 55568175 -39704476 + RLTR9B LTR ERVK 1 151 -217 7 1008 4288 116 82 8 chr17 55568247 55568570 -39704081 - RMER17D2 LTR ERVK -6 803 470 7 1008 870 54 0 0 chr17 55568570 55568682 -39703969 + (GA)n Simple_repeat Simple_repeat 1 112 0 7 1008 4288 116 82 8 chr17 55568682 55569106 -39703545 - RMER17D2 LTR ERVK -340 469 1 7 1008 484 236 32 51 chr17 55569108 55569264 -39703387 + RLTR9B LTR ERVK 285 437 0 7 1008 276 235 76 57 chr17 55569799 55569957 -39702694 - Charlie1b DNA MER1_type 0 523 363 7 1008 273 374 103 0 chr17 55569968 55570075 -39702576 + PB1 SINE Alu 2 119 -8 7 1008 324 268 113 0 chr17 55570110 55570181 -39702470 + ID SINE ID 6 84 -140 7 1008 198 167 0 0 chr17 55570285 55570321 -39702330 + CT-rich Low_complexity Low_complexity 2 37 0 7 1008 21 36 0 0 chr17 55570323 55570351 -39702300 + AT_rich Low_complexity Low_complexity 1 28 0 8 15 30028 98 43 5 chr17 55570351 55576669 -39695982 - Lx3A LINE L1 -9 6972 235 8 1009 376 360 23 6 chr17 55576670 55576846 -39695805 - Charlie1b DNA MER1_type -261 262 84 7 1009 644 287 146 31 chr17 55576851 55577139 -39695512 - MER44A DNA MER2_type -10 329 9 8 1009 516 32 0 0 chr17 55577237 55577299 -39695352 + (TCC)n Simple_repeat Simple_repeat 2 63 0 8 1009 4166 119 18 6 chr17 55577418 55578814 -39693837 - Lx LINE L1 -6 6648 5128 8 1009 706 152 254 38 chr17 55578815 55579000 -39693651 + URR1B DNA MER1_type 1 225 0 8 1009 220 145 29 14 chr17 55579600 55579670 -39692981 + T-rich Low_complexity Low_complexity 2 72 0 8 1009 1039 72 0 14 chr17 55579676 55579816 -39692835 - B1_Mus2 SINE Alu -1 146 9 8 1009 606 209 7 45 chr17 55579677 55579832 -39692819 - ID_B1 SINE B4 0 224 76 8 1009 346 239 93 8 chr17 55580939 55581057 -39691594 - MIR SINE MIR -14 248 121 8 1009 367 311 125 66 chr17 55581287 55581560 -39691091 + L1MC4 LINE L1 7224 7502 -540 9 1009 3056 66 10 8 chr17 55581560 55581955 -39690696 + MTA_Mm LTR MaLR 1 396 0 9 1009 367 311 125 66 chr17 55581955 55582073 -39690578 + L1MC4 LINE L1 7503 7638 -404 9 1009 594 288 17 55 chr17 55582533 55582823 -39689828 + Lx8 LINE L1 6173 6451 -1022 9 1009 243 23 44 22 chr17 55583334 55583379 -39689272 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 9 1009 1091 88 0 0 chr17 55583474 55583610 -39689041 + B1_Mm SINE Alu 2 137 -10 9 1009 202 286 125 28 chr17 55584087 55584159 -39688492 + L2c LINE L2 3286 3364 -23 9 1009 216 182 0 0 chr17 55585416 55585460 -39687191 + (CCCG)n Simple_repeat Simple_repeat 3 46 0 9 1009 425 19 19 0 chr17 55585907 55585961 -39686690 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 9 1009 297 75 0 0 chr17 55586559 55586599 -39686052 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 9 1009 271 281 22 33 chr17 55588896 55588988 -39683663 - MIRc SINE MIR -98 170 80 9 1009 453 36 0 0 chr17 55589876 55589931 -39682720 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 1009 318 289 113 43 chr17 55590827 55590968 -39681683 + MER2 DNA MER2_type 3 153 -192 1 1009 1053 197 56 0 chr17 55591070 55591283 -39681368 - URR1B DNA MER1_type 0 225 1 1 1009 274 260 52 10 chr17 55592059 55592156 -39680495 - MER2B DNA MER2_type -66 270 170 1 1009 3296 30 8 8 chr17 55592956 55593352 -39679299 - MTA_Mm LTR MaLR 0 396 1 1 1009 534 273 85 11 chr17 55593583 55593772 -39678879 + B3 SINE B2 1 203 -13 1 1009 243 0 0 0 chr17 55594696 55594723 -39677928 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1009 253 177 78 45 chr17 55594723 55594877 -39677774 - RMER17D LTR ERVK -489 400 242 1 1009 182 176 0 0 chr17 55594973 55595007 -39677644 + L2b LINE L2 3338 3371 -4 1 1009 579 29 0 0 chr17 55597090 55597159 -39675492 + (TTTC)n Simple_repeat Simple_repeat 3 71 0 1 1009 210 37 0 0 chr17 55597441 55597468 -39675183 + (TTCTC)n Simple_repeat Simple_repeat 1 27 0 1 1009 403 194 10 10 chr17 55597469 55597573 -39675078 + CT-rich Low_complexity Low_complexity 3 106 0 1 1009 207 0 0 0 chr17 55598606 55598629 -39674022 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1009 1596 217 62 40 chr17 55598633 55599003 -39673648 + MTD LTR MaLR 22 399 -20 1 1009 858 233 11 48 chr17 55599046 55599235 -39673416 - B3 SINE B2 -34 182 1 1 1009 221 254 0 0 chr17 55599870 55599925 -39672726 + CT-rich Low_complexity Low_complexity 3 57 0 1 1009 243 314 159 55 chr17 55601102 55601284 -39671367 - MER45B DNA Tip100 -812 228 28 1 1009 291 143 41 0 chr17 55602653 55602702 -39669949 + U6 snRNA snRNA 57 107 0 1 1009 840 322 91 10 chr17 55606588 55606895 -39665756 - MER2 DNA MER2_type -6 339 8 1 1009 576 0 0 0 chr17 55607613 55607677 -39664974 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 1 1009 1525 289 31 67 chr17 55608008 55608246 -39664405 - L1_Mur3 LINE L1 -1314 4566 4358 1 1009 1301 178 197 71 chr17 55608246 55608596 -39664055 - ORR1B1 LTR MaLR 0 394 1 1 1009 1525 289 31 67 chr17 55608596 55609150 -39663501 - L1_Mur3 LINE L1 -1523 4357 3802 1 1009 619 339 7 119 chr17 55609150 55609590 -39663061 - MTEa LTR MaLR 0 379 1 1 1009 609 256 49 86 chr17 55609592 55609724 -39662927 - L1M2 LINE L1 -2308 3835 3702 1 1009 297 0 0 0 chr17 55609724 55609757 -39662894 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1009 609 256 49 86 chr17 55609757 55609772 -39662879 - L1M2 LINE L1 -2442 3701 3696 1 1009 342 335 183 4 chr17 55609772 55610018 -39662633 - B4 SINE B4 -2 290 1 1 1009 609 256 49 86 chr17 55610018 55610194 -39662457 - L1M2 LINE L1 -2448 3695 3523 1 1009 476 262 37 0 chr17 55610195 55610302 -39662349 - B3 SINE B2 -102 114 4 1 1009 306 0 0 0 chr17 55610379 55610413 -39662238 + (TTC)n Simple_repeat Simple_repeat 3 36 0 1 1009 543 284 126 31 chr17 55610413 55610424 -39662227 - L1M2 LINE L1 -2875 3268 3257 1 1009 1476 34 0 0 chr17 55610424 55610602 -39662049 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 1 1009 543 284 126 31 chr17 55610602 55611265 -39661386 - L1M2 LINE L1 -2887 3256 2531 1 1009 267 299 174 10 chr17 55611426 55611737 -39660914 - L1_Mur3 LINE L1 -4076 1804 1443 1 1009 314 214 11 22 chr17 55611850 55611941 -39660710 - L1M4b LINE L1 -5658 1676 1587 1 1009 300 247 137 0 chr17 55612505 55612651 -39660000 + L1MA5 LINE L1 6130 6295 -5 1 1009 402 239 159 0 chr17 55612842 55612955 -39659696 - RSINE1 SINE B4 -33 132 2 1 1009 21 0 0 0 chr17 55613178 55613199 -39659452 + AT_rich Low_complexity Low_complexity 1 21 0 1 1009 690 330 20 20 chr17 55613999 55614194 -39658457 - ID_B1 SINE B4 -29 195 1 1 1009 4047 184 72 57 chr17 55614348 55615237 -39657414 + RMER19B LTR ERVK 1 902 0 1 1009 3291 136 81 7 chr17 55615397 55615952 -39656699 + Lx4A LINE L1 6459 7054 -4 1 1009 858 45 0 0 chr17 55615952 55616063 -39656588 + (TAGA)n Simple_repeat Simple_repeat 4 114 0 1 1009 194 0 39 0 chr17 55617571 55617597 -39655054 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1009 358 301 154 27 chr17 55619773 55619961 -39652690 + MER21B LTR ERV1 503 714 -149 1 1009 232 369 8 66 chr17 55620150 55620272 -39652379 + Charlie10 DNA MER1_type 31 145 -2677 1 1009 218 370 98 26 chr17 55620416 55620610 -39652041 + MIRb SINE MIR 34 241 -27 1 1009 566 335 0 0 chr17 55622799 55622969 -39649682 - B3 SINE B2 0 216 47 1 1009 375 275 73 0 chr17 55622986 55623095 -39649556 - MLT2C2 LTR ERVL -215 249 133 1 1009 276 30 0 0 chr17 55625662 55625695 -39646956 + (GGA)n Simple_repeat Simple_repeat 3 35 0 1 1009 1224 144 49 10 chr17 55626568 55626772 -39645879 + URR1B DNA MER1_type 13 224 -1 1 1009 1130 309 154 24 chr17 55627131 55627877 -39644774 + Charlie1a DNA MER1_type 61 903 -552 1 1009 22 35 0 0 chr17 55627909 55627938 -39644713 + AT_rich Low_complexity Low_complexity 1 29 0 1 1009 575 215 31 0 chr17 55628097 55628227 -39644424 + Charlie1a DNA MER1_type 913 1046 -409 1 1009 318 106 0 0 chr17 55628234 55628281 -39644370 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1009 32 57 0 0 chr17 55628338 55628391 -39644260 + AT_rich Low_complexity Low_complexity 1 53 0 1 1009 342 244 84 54 chr17 55628523 55628714 -39643937 - MER58B DNA MER1_type -15 326 2 1 1009 456 19 0 0 chr17 55628731 55628784 -39643867 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1009 690 13 0 0 chr17 55628784 55628862 -39643789 + (GA)n Simple_repeat Simple_repeat 1 79 0 1 1009 1603 70 14 0 chr17 55629080 55629294 -39643357 + L1Md_F2 LINE L1 6354 6570 -12 1 1009 752 137 8 8 chr17 55630595 55630727 -39641924 - URR1B DNA MER1_type 0 225 94 1 1009 402 187 0 74 chr17 55630943 55631024 -39641627 - ID4_ SINE ID -7 76 2 1 1009 258 247 25 0 chr17 55631523 55631604 -39641047 + A-rich Low_complexity Low_complexity 4 86 0 1 1009 350 301 57 8 chr17 55631604 55631728 -39640923 + B1F SINE Alu 1 130 -19 1 1009 180 0 0 0 chr17 55632173 55632193 -39640458 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1009 277 253 73 45 chr17 55632638 55632798 -39639853 - Kanga1d DNA Tc2 0 181 19 1 1009 2421 295 139 56 chr17 55632865 55632938 -39639713 - Lx8 LINE L1 -73 7400 7333 1 1009 231 36 0 0 chr17 55632938 55632966 -39639685 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1 1009 2421 295 139 56 chr17 55632966 55634070 -39638581 - Lx8 LINE L1 -141 7332 6169 1 1009 423 0 0 0 chr17 55634070 55634117 -39638534 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1009 2421 295 139 56 chr17 55634117 55634179 -39638472 - Lx8 LINE L1 -1305 6168 6096 1 1009 327 25 0 0 chr17 55634179 55634219 -39638432 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1009 2421 286 72 36 chr17 55634219 55635150 -39637501 - Lx8 LINE L1 -1378 6095 5064 1 1009 477 62 0 0 chr17 55636472 55636537 -39636114 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 1009 250 314 108 17 chr17 55637046 55637166 -39635485 + MER58A DNA MER1_type 1 131 -93 1 1009 517 313 27 11 chr17 55637962 55638146 -39634505 - MER3 DNA MER1_type 0 209 23 1 1009 2582 181 55 51 chr17 55638563 55639071 -39633580 + RMER20A LTR ERVK 1 510 -6 1 1009 562 269 84 32 chr17 55639921 55640171 -39632480 - RLTR15 LTR ERVK -96 263 1 1 1009 952 257 134 7 chr17 55640201 55640499 -39632152 + MER2 DNA MER2_type 7 342 -3 1 1009 567 293 43 10 chr17 55641865 55642072 -39630579 + B3 SINE B2 2 215 -1 1 1009 34 42 0 0 chr17 55642160 55642208 -39630443 + AT_rich Low_complexity Low_complexity 1 48 0 1 1009 467 342 76 38 chr17 55642536 55642694 -39629957 - RSINE1 SINE B4 0 165 2 1 1009 1038 69 35 0 chr17 55643331 55643475 -39629176 + L1_Mus2 LINE L1 6416 6564 -2 1 1009 353 216 140 43 chr17 55643757 55643921 -39628730 - Lx6 LINE L1 -26 7434 7255 1 1009 1214 249 10 17 chr17 55643925 55644219 -39628432 + Lx6 LINE L1 6977 7268 -192 1 1009 19262 81 31 3 chr17 55644446 55645545 -39627106 - Lx3_Mus LINE L1 -422 6587 5435 1 1009 833 33 32 16 chr17 55645545 55645669 -39626982 - L1Md_F3 LINE L1 0 6584 6459 1 1009 5321 45 19 9 chr17 55645669 55646342 -39626309 + L1Md_F2 LINE L1 5891 6570 -12 1 1009 19262 84 47 9 chr17 55646342 55648969 -39623682 - Lx3_Mus LINE L1 -452 5434 2733 1 1009 342 0 0 0 chr17 55649764 55649802 -39622849 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1009 1691 77 92 39 chr17 55654974 55655257 -39617394 - L1_Mus3 LINE L1 0 6638 6341 1 1009 453 36 0 0 chr17 55655850 55655905 -39616746 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1009 237 266 45 77 chr17 55656270 55656425 -39616226 + L1MA5 LINE L1 5857 6006 -294 1 1009 1174 272 83 30 chr17 55656813 55657249 -39615402 - Lx6 LINE L1 -21 7439 6981 1 1009 215 394 14 0 chr17 55657999 55658070 -39614581 + ID4 SINE ID 12 83 0 1 1009 530 291 8 8 chr17 55658418 55658536 -39614115 + RSINE1 SINE B4 31 148 -17 1 1009 324 0 0 0 chr17 55658541 55658577 -39614074 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1009 504 0 0 0 chr17 55658577 55658632 -39614019 + (GA)n Simple_repeat Simple_repeat 2 57 0 1 1009 544 295 116 43 chr17 55658757 55659570 -39613081 + L1M2 LINE L1 4890 5790 -510 1 1009 1325 204 119 3 chr17 55659667 55659962 -39612689 + ORR1A4 LTR MaLR 1 329 0 1 1009 515 354 113 45 chr17 55660219 55660778 -39611873 + L1M4 LINE L1 40 636 -5906 1 1009 325 226 16 50 chr17 55660936 55661057 -39611594 - Lx9 LINE L1 -7 7637 7521 1 1009 648 281 73 91 chr17 55662625 55663064 -39609587 + RMER20B LTR ERVK 91 591 -36 1 1009 216 184 0 0 chr17 55663596 55663645 -39609006 + T-rich Low_complexity Low_complexity 1 49 0 1 1009 8097 21 0 0 chr17 55663651 55665117 -39607534 - L1Md_T LINE L1 0 6582 5117 1 1009 9338 24 0 0 chr17 55665115 55666257 -39606394 + L1Md_T LINE L1 3991 5132 -751 1 1009 407 297 63 79 chr17 55666990 55667242 -39605409 - MER44C DNA MER2_type -95 638 391 1 1009 227 333 51 51 chr17 55667497 55667614 -39605037 - MLT1J-int LTR MaLR -848 539 423 1 1009 273 299 102 10 chr17 55668000 55668098 -39604553 - MLT1J LTR MaLR -312 200 94 1 1009 829 271 116 20 chr17 55668300 55668646 -39604005 + MTE2a LTR MaLR 1 379 0 1 1009 360 268 194 17 chr17 55669563 55669738 -39602913 - MER65D LTR ERV1 -111 362 157 1 1009 239 311 108 8 chr17 55669825 55669945 -39602706 - MER65D LTR ERV1 -341 132 1 1 1009 650 270 22 0 chr17 55670265 55670443 -39602208 - MTD LTR MaLR 0 419 238 1 1009 292 329 60 53 chr17 55671704 55671850 -39600801 + MLT1J1 LTR MaLR 261 407 -37 1 1009 336 239 90 11 chr17 55671850 55671939 -39600712 + MTD LTR MaLR 3 98 -321 1 1009 23 54 0 0 chr17 55671949 55671986 -39600665 + AT_rich Low_complexity Low_complexity 1 37 0 2 1009 7100 113 52 20 chr17 55671987 55673147 -39599504 - Lx3A LINE L1 -2 6979 5783 2 1009 25 31 0 0 chr17 55673166 55673198 -39599453 + AT_rich Low_complexity Low_complexity 1 32 0 2 1009 546 42 0 40 chr17 55674511 55674610 -39598041 + L1Md_F3 LINE L1 6489 6583 -1 2 1009 3824 60 2 0 chr17 55674931 55675432 -39597219 - L1_Mur1 LINE L1 -89 5797 5296 2 1009 5695 62 16 2 chr17 55675430 55675767 -39596884 + L1_Mur1 LINE L1 3146 3485 -2401 2 1009 216 0 0 0 chr17 55675767 55675791 -39596860 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 1009 5695 62 16 2 chr17 55675791 55676281 -39596370 + L1_Mur1 LINE L1 3486 3982 -1904 2 1009 1308 276 30 0 chr17 55676282 55676583 -39596068 + MTD LTR MaLR 110 419 0 1 1009 36048 16 2 7 chr17 55677008 55682261 -39590390 + L1Md_A LINE L1 364 5586 -297 2 1009 8712 18 1 1 chr17 55682261 55683257 -39589394 + L1Md_A LINE L1 5587 6582 0 2 1009 474 316 102 51 chr17 55683306 55683599 -39589052 - MER34A LTR ERV1 -184 387 80 2 1009 187 312 53 11 chr17 55683646 55683740 -39588911 + L3 LINE CR1 2433 2530 -1959 2 1009 492 282 30 15 chr17 55684638 55684771 -39587880 + MLT1A0 LTR MaLR 229 363 -2 2 1009 375 73 0 0 chr17 55685069 55685124 -39587527 + (TTG)n Simple_repeat Simple_repeat 2 56 0 2 1009 837 0 0 0 chr17 55686551 55686644 -39586007 + (CTG)n Simple_repeat Simple_repeat 1 93 0 2 1009 378 338 88 31 chr17 55686818 55687044 -39585607 - MER34A LTR ERV1 -332 239 1 2 1009 548 243 51 34 chr17 55687047 55687281 -39585370 + L1ME2z LINE L1 6201 6438 -6 2 1009 379 181 13 53 chr17 55687567 55687643 -39585008 + ID4_ SINE ID 1 73 -10 2 1009 597 28 0 0 chr17 55688133 55688204 -39584447 + (CA)n Simple_repeat Simple_repeat 2 72 0 2 1009 609 286 43 70 chr17 55688210 55688654 -39583997 - L1MA4 LINE L1 -376 5924 5493 2 1009 349 253 98 54 chr17 55688665 55688849 -39583802 - B3 SINE B2 -3 192 1 2 1009 2067 209 104 24 chr17 55688892 55689316 -39583335 + RLTR20B2 LTR ERVK 1 450 -110 2 1009 540 0 0 0 chr17 55689316 55689376 -39583275 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 1009 2067 209 104 24 chr17 55689376 55689461 -39583190 + RLTR20B2 LTR ERVK 451 550 -10 2 1009 6096 157 66 11 chr17 55689462 55690768 -39581883 + MYSERV16_I-int LTR ERVK 921 2297 -29 2 1009 1090 238 70 19 chr17 55690793 55691210 -39581441 + RLTR20B1 LTR ERVK 4 451 -83 2 1009 36411 43 0 3 chr17 55691227 55697687 -39574964 - L1Md_T LINE L1 0 6585 49 2 1009 365 273 0 0 chr17 55697687 55697764 -39574887 + RLTR20B1 LTR ERVK 463 539 -24 2 1009 419 0 20 0 chr17 55697782 55697833 -39574818 + (TTTTG)n Simple_repeat Simple_repeat 4 55 0 2 1009 1171 37 0 0 chr17 55697833 55697968 -39574683 - B1_Mus1 SINE Alu -12 136 2 2 1009 342 321 46 36 chr17 55697970 55698353 -39574298 - L1MA4 LINE L1 -463 5417 5041 2 1009 1727 213 43 29 chr17 55699207 55699622 -39573029 + MTC LTR MaLR 1 421 0 2 1009 760 267 147 7 chr17 55700293 55700572 -39572079 - MLT1B LTR MaLR -72 318 1 2 1009 2118 215 28 132 chr17 55702133 55702807 -39569844 + RMER19C LTR ERVK 1 604 -7 2 1009 984 288 45 73 chr17 55702822 55703206 -39569445 - MTE2a LTR MaLR -14 405 25 2 1009 205 167 0 40 chr17 55703544 55703594 -39569057 + A-rich Low_complexity Low_complexity 6 53 0 2 1009 753 301 22 102 chr17 55703597 55703911 -39568740 - MTD LTR MaLR -47 372 84 2 1009 308 254 14 0 chr17 55703976 55704047 -39568604 - MTD LTR MaLR -347 72 1 2 1009 288 226 32 0 chr17 55704081 55704143 -39568508 - MTEa LTR MaLR -1 378 315 2 1009 582 264 122 6 chr17 55704196 55704360 -39568291 - MTEa LTR MaLR -196 183 1 2 1009 1137 165 0 0 chr17 55704520 55704708 -39567943 - MERVL_2A-int LTR ERVL -3087 2674 2487 2 1009 1029 55 0 15 chr17 55704712 55704842 -39567809 - B1_Mm SINE Alu -18 129 2 2 126 6430 234 59 26 chr17 55704842 55707097 -39565554 - MERVL_2A-int LTR ERVL -3321 2440 5 2 1010 304 107 0 200 chr17 55707102 55707172 -39565479 - MT2B LTR ERVL -2 582 527 2 1010 30 77 0 0 chr17 55707177 55707242 -39565409 + AT_rich Low_complexity Low_complexity 1 65 0 2 1010 1031 245 68 54 chr17 55707305 55707599 -39565052 - MT2B LTR ERVL -47 554 257 2 1010 264 269 140 26 chr17 55707606 55707835 -39564816 - L1MC4a LINE L1 -47 7948 7694 2 1010 425 226 55 171 chr17 55707855 55708218 -39564433 - L1MC4a LINE L1 -520 7362 7042 2 1010 5222 108 74 7 chr17 55708189 55709070 -39563581 - L1_Mus3 LINE L1 -7 6631 5692 2 1010 25300 95 4 30 chr17 55709074 55712632 -39560019 - L1Md_F2 LINE L1 -16 6566 3174 2 1010 210 37 0 0 chr17 55712632 55712659 -39559992 + (CAAA)n Simple_repeat Simple_repeat 4 30 0 2 1010 25300 110 6 42 chr17 55712659 55714125 -39558526 - L1Md_F2 LINE L1 -2710 3173 1699 2 1010 376 291 113 32 chr17 55714125 55714310 -39558341 + B3A SINE B2 17 216 0 2 1010 33898 44 0 3 chr17 55714441 55719561 -39553090 + L1Md_T LINE L1 388 5589 -297 2 1010 8505 32 0 0 chr17 55719561 55720557 -39552094 + L1Md_T LINE L1 5590 6585 0 2 1010 435 196 14 7 chr17 55720608 55720747 -39551904 + (TA)n Simple_repeat Simple_repeat 1 140 0 2 1010 21 0 0 0 chr17 55721668 55721689 -39550962 + AT_rich Low_complexity Low_complexity 1 21 0 2 1010 24035 159 24 7 chr17 55722171 55727669 -39544982 - Lx LINE L1 -3 6651 1062 2 1010 288 0 0 0 chr17 55727669 55727701 -39544950 + (CAT)n Simple_repeat Simple_repeat 1 32 0 2 1010 3719 178 104 32 chr17 55727701 55728385 -39544266 - Lx LINE L1 -5573 1061 415 2 1010 1137 65 0 0 chr17 55728385 55728524 -39544127 - B1_Mus2 SINE Alu -7 140 2 2 1010 1354 253 32 67 chr17 55728524 55728818 -39543833 - Lx LINE L1 -5981 653 364 2 1010 595 253 425 36 chr17 55729494 55729696 -39542955 - RMER12 LTR ERVK -242 1606 1449 2 1010 522 79 0 0 chr17 55729696 55729772 -39542879 + (CA)n Simple_repeat Simple_repeat 2 77 0 2 1010 595 265 157 35 chr17 55729772 55730013 -39542638 - RMER12 LTR ERVK -400 1448 1165 2 1010 1038 275 41 91 chr17 55730189 55730834 -39541817 - RMER12 LTR ERVK -1239 609 2 2 1010 918 253 21 0 chr17 55732723 55732964 -39539687 - L1_Mur3 LINE L1 -369 5511 5266 2 1010 248 265 55 30 chr17 55733029 55733140 -39539511 + L1VL2 LINE L1 443 572 -3044 2 1010 1211 222 57 21 chr17 55733393 55733724 -39538927 + L1VL2 LINE L1 482 824 -5511 2 1010 25970 85 6 89 chr17 55733725 55738234 -39534417 + L1Md_F2 LINE L1 128 4244 -1642 2 1010 8259 31 12 0 chr17 55738234 55739218 -39533433 + L1Md_A LINE L1 5587 6582 0 2 1010 25970 87 6 110 chr17 55739218 55740594 -39532057 + L1Md_F2 LINE L1 4245 5589 -297 2 1010 8072 46 2 2 chr17 55740594 55741590 -39531061 + L1Md_F2 LINE L1 5590 6585 0 2 1010 1064 126 12 80 chr17 55741590 55741692 -39530959 + L1VL4 LINE L1 1111 1200 -5457 2 1010 1743 5 0 0 chr17 55741692 55741885 -39530766 + B2_Mm1a SINE B2 1 193 0 2 1010 7442 156 18 52 chr17 55741885 55743976 -39528675 + L1VL4 LINE L1 1201 4439 -1438 2 1010 5414 172 13 7 chr17 55743976 55744969 -39527682 + Lx2 LINE L1 5988 6986 -11 2 1010 258 288 113 13 chr17 55745103 55745194 -39527457 - PB1D10 SINE Alu -12 105 1 2 1010 504 0 0 0 chr17 55746117 55746173 -39526478 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1010 319 349 102 6 chr17 55746392 55746559 -39526092 + MT2A LTR ERVL 343 525 -8 2 1010 356 291 36 48 chr17 55746777 55746943 -39525708 - RNLTR23 LTR ERVK 0 642 479 2 1010 966 118 0 0 chr17 55748147 55748291 -39524360 - L1_Mur1 LINE L1 -1295 4591 4448 2 1010 4920 174 29 21 chr17 55748291 55749252 -39523399 + Lx2B LINE L1 6027 6995 -5 2 1010 245 287 98 65 chr17 55751647 55751770 -39520881 + B1_Mm SINE Alu 1 127 -22 2 1010 1378 102 0 0 chr17 55751773 55751970 -39520681 + L1VL2 LINE L1 601 797 -5538 2 1010 32550 96 6 1 chr17 55751979 55757934 -39514717 + L1_Mus1 LINE L1 584 6567 0 2 1010 1171 98 8 10 chr17 55757971 55758184 -39514467 + MusHAL1 LINE L1 1085 1297 -5427 2 1010 279 207 60 12 chr17 55758176 55758259 -39514392 + Lx9 LINE L1 7536 7622 -22 2 1010 203 0 37 0 chr17 55758310 55758337 -39514314 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 2 1010 664 290 192 34 chr17 55758346 55759121 -39513530 + L1M2 LINE L1 3255 4152 -1991 2 1010 23 50 0 48 chr17 55759315 55759378 -39513273 + AT_rich Low_complexity Low_complexity 1 60 0 2 1010 1483 221 48 14 chr17 55760071 55760425 -39512226 + ORR1B2 LTR MaLR 2 367 0 2 1010 1305 320 23 27 chr17 55765009 55765485 -39507166 + Lx6 LINE L1 6952 7425 -35 2 1010 7782 59 8 1 chr17 55765647 55766932 -39505719 - L1Md_F2 LINE L1 0 6582 5289 2 1010 280 264 93 9 chr17 55767083 55767190 -39505461 - Lx9 LINE L1 -9 7635 7520 2 1010 216 111 0 0 chr17 55767192 55767228 -39505423 + (TA)n Simple_repeat Simple_repeat 1 36 0 2 1010 246 277 0 0 chr17 55767520 55767585 -39505066 + (CA)n Simple_repeat Simple_repeat 2 66 0 2 1010 458 305 71 41 chr17 55767819 55768646 -39504005 - L1MA4 LINE L1 -455 5845 4988 2 1010 532 270 62 106 chr17 55768700 55769264 -39503387 + L1_Rod LINE L1 2727 3265 -2582 2 1010 180 0 0 0 chr17 55769275 55769295 -39503356 + (TTG)n Simple_repeat Simple_repeat 3 22 0 2 1010 237 305 28 19 chr17 55769306 55769413 -39503238 + L1_Rod LINE L1 3241 3348 -2499 2 1010 3498 198 26 1 chr17 55769411 55770104 -39502547 + L1_Mur2 LINE L1 85 794 -5918 2 1010 25211 122 89 6 chr17 55770105 55775393 -39497258 + L1_Mus3 LINE L1 670 6435 -203 2 1010 3520 31 28 12 chr17 55775393 55775822 -39496829 - RLTR10C LTR ERVK 0 436 1 2 1010 6555 92 82 9 chr17 55775822 55776017 -39496634 + L1_Mus3 LINE L1 6436 6631 -7 2 1010 23 33 0 0 chr17 55776735 55776765 -39495886 + AT_rich Low_complexity Low_complexity 1 30 0 2 1010 25874 114 14 36 chr17 55776909 55783225 -39489426 - L1_Mus2 LINE L1 -1 6565 426 2 1010 23 33 0 0 chr17 55784380 55784410 -39488241 + AT_rich Low_complexity Low_complexity 1 30 0 2 1010 2239 81 132 11 chr17 55784630 55784978 -39487673 - RLTR10 LTR ERVK 0 390 1 2 1010 272 310 110 7 chr17 55785115 55785261 -39487390 - RMER30 DNA MER1_type -30 172 12 2 1010 516 262 106 14 chr17 55786969 55787186 -39485465 + Lx8 LINE L1 6779 7015 -458 2 1010 3006 64 43 3 chr17 55787354 55787746 -39484905 + L1_Mus1 LINE L1 6159 6566 -1 2 1010 2322 181 69 22 chr17 55787806 55788310 -39484341 + RLTR11A LTR ERVK 1 528 0 2 1010 234 0 0 0 chr17 55788397 55788423 -39484228 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1010 594 0 0 0 chr17 55788423 55788488 -39484163 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 1010 207 0 0 0 chr17 55789497 55789520 -39483131 + (GGATG)n Simple_repeat Simple_repeat 5 27 0 2 1010 294 262 9 14 chr17 55789532 55789653 -39482998 - L1M2 LINE L1 -702 5595 5471 2 1010 464 302 92 59 chr17 55789654 55790111 -39482540 - Lx9 LINE L1 0 7644 7173 2 1010 388 296 15 10 chr17 55790129 55790334 -39482317 - L1M2 LINE L1 -2364 3779 3574 2 1010 309 227 67 22 chr17 55790406 55790496 -39482155 - MTC LTR MaLR -325 96 3 2 1010 1019 186 165 4 chr17 55790748 55791002 -39481649 + L1_Mur2 LINE L1 5535 5829 -48 2 1010 534 31 0 0 chr17 55791047 55791111 -39481540 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 1010 7481 50 32 5 chr17 55791233 55792209 -39480442 - Lx3_Mus LINE L1 -5 7004 6003 2 1010 1103 71 0 0 chr17 55794267 55794407 -39478244 + B1_Mus2 SINE Alu 2 141 -6 2 1010 1134 120 0 0 chr17 55794407 55794582 -39478069 + (GGGA)n Simple_repeat Simple_repeat 4 178 0 2 1010 7254 156 43 20 chr17 55794647 55796263 -39476388 - Lx2B LINE L1 -6 6994 5335 3 1010 5369 55 0 0 chr17 55796316 55797009 -39475642 + L1Md_F2 LINE L1 4894 5586 -297 3 1010 8137 40 8 3 chr17 55797009 55798000 -39474651 + L1Md_F2 LINE L1 5587 6582 0 3 1010 185 278 19 0 chr17 55798098 55798152 -39474499 + L2b LINE L2 3319 3373 -2 3 1010 5986 106 9 15 chr17 55798172 55799406 -39473245 + L1VL4 LINE L1 33 1255 -2304 3 1010 899 74 81 0 chr17 55799406 55799555 -39473096 + MusHAL1 LINE L1 231 391 -2321 3 1010 3174 159 80 25 chr17 55799552 55800777 -39471874 + Lx2 LINE L1 5406 6649 -5 3 1010 264 56 74 0 chr17 55800880 55800934 -39471717 + (CAAAA)n Simple_repeat Simple_repeat 1 58 0 3 1010 506 165 22 0 chr17 55800934 55801025 -39471626 + U6 snRNA snRNA 1 93 -14 3 1010 329 128 250 65 chr17 55801048 55801140 -39471511 + URR1B DNA MER1_type 117 225 0 3 1010 357 24 0 0 chr17 55802942 55802984 -39469667 + (TAA)n Simple_repeat Simple_repeat 2 43 0 3 1010 3293 110 23 4 chr17 55803756 55804278 -39468373 + Lx2 LINE L1 5881 6412 -585 3 1010 180 111 0 0 chr17 55805086 55805113 -39467538 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1010 578 246 150 12 chr17 55806008 55806181 -39466470 + B3A SINE B2 1 197 -1 3 1010 422 294 140 0 chr17 55806318 55806461 -39466190 - RSINE1 SINE B4 0 165 3 3 1010 391 185 0 0 chr17 55807460 55807472 -39465179 - L1_Rod LINE L1 -1909 3938 3927 3 1010 5739 85 8 9 chr17 55807472 55808267 -39464384 - Lx LINE L1 -12 6642 5849 3 1010 470 121 0 6 chr17 55808267 55808363 -39464288 - L1_Mur2 LINE L1 -1956 3927 3834 3 1010 22 88 0 0 chr17 55808659 55808716 -39463935 + AT_rich Low_complexity Low_complexity 1 57 0 3 1010 24 53 0 0 chr17 55808883 55808921 -39463730 + AT_rich Low_complexity Low_complexity 1 38 0 3 1010 198 71 0 0 chr17 55808941 55808969 -39463682 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1010 415 310 138 27 chr17 55810607 55811158 -39461493 - L1MC4 LINE L1 -456 7586 6975 3 1010 344 320 118 50 chr17 55811184 55811345 -39461306 - L1MC4 LINE L1 -1003 6879 6708 3 1010 23 0 0 0 chr17 55811707 55811730 -39460921 + AT_rich Low_complexity Low_complexity 1 23 0 3 1010 22 88 0 0 chr17 55811778 55811835 -39460816 + AT_rich Low_complexity Low_complexity 1 57 0 3 1010 243 0 0 0 chr17 55812627 55812654 -39459997 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1010 192 196 32 111 chr17 55813380 55813443 -39459208 + L3b LINE CR1 425 482 0 3 1010 2334 248 86 43 chr17 55814208 55815512 -39457139 + L1_Mur3 LINE L1 868 2244 -3636 3 1010 2134 100 3 70 chr17 55815514 55815870 -39456781 + IAPLTR1a_Mm LTR ERVK 1 332 -5 3 1010 32246 16 8 0 chr17 55815882 55819676 -39452975 + IAPEz-int LTR ERVK 35 3857 -2624 3 1010 338 205 12 0 chr17 55819684 55819767 -39452884 + L1_Mur3 LINE L1 2696 2779 -3101 3 1010 371 279 40 45 chr17 55819771 55819970 -39452681 - L1_Mur3 LINE L1 -3787 2093 1896 3 1010 2062 276 46 19 chr17 55820015 55820715 -39451936 + Lx7 LINE L1 6558 7276 -420 3 1010 215 262 39 31 chr17 55820723 55820853 -39451798 + (TTTA)n Simple_repeat Simple_repeat 2 132 0 3 1010 2454 93 8 8 chr17 55821390 55821749 -39450902 - L1_Mus1 LINE L1 0 6567 6209 3 1010 26848 79 6 5 chr17 55821749 55825673 -39446978 - L1_Mm LINE L1 -548 5335 1407 3 1010 5024 98 12 67 chr17 55825672 55826577 -39446074 - L1VL1 LINE L1 -5358 1064 210 3 1010 303 121 0 0 chr17 55826767 55826825 -39445826 + (GA)n Simple_repeat Simple_repeat 2 59 0 3 1010 3701 161 23 30 chr17 55827345 55828255 -39444396 - ORR1A2-int LTR MaLR -612 897 1 3 1010 1732 131 94 32 chr17 55828255 55828563 -39444088 - ORR1A2 LTR MaLR 0 327 1 3 1010 3682 78 50 1 chr17 55828839 55829797 -39442854 + L1VL2 LINE L1 521 1528 -2087 3 1010 2289 99 99 73 chr17 55829798 55830085 -39442566 + RLTR9B LTR ERVK 2 316 -121 3 1010 1486 71 0 0 chr17 55830085 55830281 -39442370 - L1_Mus1 LINE L1 0 6567 6372 3 1010 2289 99 99 73 chr17 55830281 55830418 -39442233 + RLTR9B LTR ERVK 317 437 0 3 1010 212 171 0 0 chr17 55830725 55830766 -39441885 + A-rich Low_complexity Low_complexity 1 41 0 3 1010 5817 100 9 52 chr17 55830833 55831067 -39441584 + L1_Mus3 LINE L1 5746 5971 -667 3 1010 1162 61 0 26 chr17 55831067 55831218 -39441433 + B1_Mm SINE Alu 1 147 0 3 1010 5817 100 9 52 chr17 55831218 55831911 -39440740 + L1_Mus3 LINE L1 5972 6633 -5 3 1010 214 182 0 0 chr17 55831918 55831962 -39440689 + (TAA)n Simple_repeat Simple_repeat 2 45 0 3 1010 547 322 37 75 chr17 55832671 55832859 -39439792 + B3A SINE B2 3 183 -12 3 1010 512 313 36 120 chr17 55832889 55833183 -39439468 + MTD LTR MaLR 18 274 -122 3 1010 364 228 182 24 chr17 55833230 55833356 -39439295 + MTD LTR MaLR 234 400 -19 3 1010 279 260 8 148 chr17 55833518 55833535 -39439116 + MT2B LTR ERVL 155 258 -342 3 1010 508 260 0 0 chr17 55833535 55833639 -39439012 + B1_Mur2 SINE Alu 2 105 -44 3 1010 21 36 0 0 chr17 55834089 55834117 -39438534 + AT_rich Low_complexity Low_complexity 1 28 0 3 1010 1414 55 49 0 chr17 55834702 55834885 -39437766 + B2_Mm1t SINE B2 2 193 0 3 1010 252 174 84 28 chr17 55835388 55835459 -39437192 - L1MEc LINE L1 -3948 2452 2378 3 1010 244 281 0 15 chr17 55836030 55836095 -39436556 + (TG)n Simple_repeat Simple_repeat 1 64 0 3 1011 260 259 87 31 chr17 55837010 55837145 -39435506 + MTE2a LTR MaLR 218 370 -9 3 1011 634 156 96 19 chr17 55838648 55838805 -39433846 - MTD LTR MaLR 0 419 251 3 1011 930 154 39 19 chr17 55839512 55839721 -39432930 + ORR1A2 LTR MaLR 93 311 -73 3 1011 592 166 0 208 chr17 55841231 55841414 -39431237 + B1F1 SINE Alu 5 149 0 3 1011 859 254 28 9 chr17 55841530 55841745 -39430906 + ID_B1 SINE B4 4 222 -2 3 1011 224 218 16 113 chr17 55843303 55843365 -39429286 - PB1 SINE Alu -63 64 9 3 1011 436 335 34 20 chr17 55843971 55844175 -39428476 + B4A SINE B4 86 292 0 3 1011 635 243 68 26 chr17 55844173 55844363 -39428288 + B3 SINE B2 19 216 0 3 1011 261 0 0 0 chr17 55844470 55844499 -39428152 + (T)n Simple_repeat Simple_repeat 1 29 0 3 1011 2003 47 8 0 chr17 55844676 55844930 -39427721 - L1Md_T LINE L1 0 6582 6327 3 1011 400 270 92 25 chr17 55846414 55846577 -39426074 + LTR48B LTR ERV1 134 307 -337 3 1011 240 275 204 44 chr17 55846684 55846821 -39425830 + LTR48B LTR ERV1 601 759 -28 3 1011 3543 20 0 0 chr17 55846837 55847233 -39425418 + MTA_Mm LTR MaLR 1 396 0 3 1011 1960 204 60 43 chr17 55849365 55849897 -39422754 + RLTR28 LTR ERVL 2 524 0 3 1011 352 37 37 0 chr17 55850473 55850527 -39422124 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 1011 225 0 0 0 chr17 55851574 55851599 -39421052 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1011 192 40 0 0 chr17 55851629 55851654 -39420997 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 1011 189 0 0 0 chr17 55852080 55852101 -39420550 + (G)n Simple_repeat Simple_repeat 1 21 0 3 1011 33 0 0 0 chr17 55852505 55852538 -39420113 + AT_rich Low_complexity Low_complexity 1 33 0 3 1011 1091 175 42 0 chr17 55853844 55854061 -39418590 + URR1A DNA MER1_type 1 226 0 3 1011 533 330 101 36 chr17 55854482 55854790 -39417861 + MLT1A0 LTR MaLR 36 363 -2 3 1011 321 327 0 32 chr17 55855679 55855837 -39416814 - L1_Rod LINE L1 -1877 3970 3818 3 1011 329 228 93 34 chr17 55855910 55856028 -39416623 - L1_Mur2 LINE L1 -2283 3860 3707 3 1011 550 151 49 32 chr17 55856044 55856167 -39416484 - Lx4A LINE L1 0 7058 6934 3 1011 3865 180 90 14 chr17 55856189 55857063 -39415588 - ORR1A3-int LTR MaLR -741 1222 282 3 1011 11268 99 18 1 chr17 55857567 55859892 -39412759 - L1_Mus3 LINE L1 0 6638 4269 3 1011 3029 87 2 16 chr17 55859893 55860325 -39412326 + L1_Mus4 LINE L1 6211 6636 0 3 1011 192 338 39 0 chr17 55860361 55860438 -39412213 + L4 LINE RTE 1749 1828 -201 3 1011 511 246 196 22 chr17 55860460 55860639 -39412012 - B3 SINE B2 -5 211 2 3 1011 295 130 22 0 chr17 55860749 55860795 -39411856 - MTE2a LTR MaLR -331 48 2 3 1011 254 376 7 22 chr17 55861113 55861249 -39411402 - MTE2b LTR MaLR -189 190 57 3 1011 319 317 42 0 chr17 55861368 55861510 -39411141 + L1M1 LINE L1 5446 5593 -707 3 1011 280 297 31 71 chr17 55861511 55861638 -39411013 + RLTR25B LTR ERVK 1 122 -906 3 1011 6314 42 1 0 chr17 55862606 55863368 -39409283 + L1Md_F3 LINE L1 5822 6584 0 3 1011 231 236 0 65 chr17 55863497 55863574 -39409077 + Lx2B LINE L1 6812 6883 -117 3 1011 760 303 62 29 chr17 55863582 55863907 -39408744 - ORR1E LTR MaLR -24 350 6 3 1011 276 158 0 0 chr17 55864090 55864147 -39408504 + CT-rich Low_complexity Low_complexity 4 60 0 3 1011 22 56 0 0 chr17 55864207 55864243 -39408408 + AT_rich Low_complexity Low_complexity 1 36 0 3 1011 1898 138 25 0 chr17 55864263 55864582 -39408069 + ORR1A4 LTR MaLR 1 327 -2 3 1011 1193 55 0 0 chr17 55864754 55864900 -39407751 + B1_Mus1 SINE Alu 1 146 -2 3 1011 1221 89 9 0 chr17 55864990 55865204 -39407447 + (TTC)n Simple_repeat Simple_repeat 1 215 0 3 1011 5922 140 13 7 chr17 55866550 55867499 -39405152 - Lx LINE L1 0 6654 5724 3 1011 215 349 22 44 chr17 55867511 55867601 -39405050 - B4 SINE B4 -204 88 1 3 1011 616 101 39 103 chr17 55867631 55867786 -39404865 - L1Md_F2 LINE L1 0 6582 6438 3 1011 1240 89 5 59 chr17 55868148 55868302 -39404349 + B2_Mm2 SINE B2 2 155 -40 3 1011 315 0 0 0 chr17 55868302 55868337 -39404314 + (TAAAA)n Simple_repeat Simple_repeat 5 39 0 3 1011 1240 89 5 59 chr17 55868337 55868385 -39404266 + B2_Mm2 SINE B2 156 192 -3 3 1011 32553 77 2 20 chr17 55869278 55874327 -39398324 + L1Md_F3 LINE L1 632 5586 -297 3 1011 7855 53 2 2 chr17 55874327 55875308 -39397343 + L1Md_F3 LINE L1 5587 6567 -17 3 1011 288 77 0 0 chr17 55875312 55875351 -39397300 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 3 1011 843 336 22 19 chr17 55875351 55875675 -39396976 - MTEa LTR MaLR -31 348 24 3 1011 373 339 61 6 chr17 55876450 55876631 -39396020 - Lx8 LINE L1 -155 7318 7128 3 1011 464 129 32 0 chr17 55878264 55878388 -39394263 + (TCTA)n Simple_repeat Simple_repeat 1 128 0 3 1011 2381 186 30 2 chr17 55878479 55878941 -39393710 - Lx2B LINE L1 -512 6488 6014 4 1011 313 236 0 0 chr17 55878941 55879013 -39393638 + Lx2A LINE L1 6932 7003 -5 4 1011 7388 113 6 32 chr17 55879599 55880997 -39391654 - L1_Mus3 LINE L1 0 6638 5305 4 1011 1116 89 0 7 chr17 55880997 55881144 -39391507 - B1_Mm SINE Alu 0 147 2 4 1011 3984 184 14 62 chr17 55881144 55881383 -39391268 - L1_Mus3 LINE L1 -809 5334 5093 4 1011 230 208 83 0 chr17 55881367 55881439 -39391212 - L1_Mus3 LINE L1 -3321 2822 2745 4 1011 26 64 0 0 chr17 55881553 55881600 -39391051 + AT_rich Low_complexity Low_complexity 1 47 0 4 1011 26 30 0 0 chr17 55881686 55881719 -39390932 + AT_rich Low_complexity Low_complexity 1 33 0 4 1011 267 31 0 0 chr17 55881782 55881814 -39390837 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 4 1011 319 303 0 0 chr17 55882451 55882540 -39390111 + PB1D10 SINE Alu 27 115 -2 4 1011 5757 92 28 8 chr17 55882687 55883177 -39389474 - L1VL2 LINE L1 -1792 1823 1316 4 1011 1087 82 0 26 chr17 55883177 55883328 -39389323 - B1_Mus1 SINE Alu -1 147 1 4 1011 5757 86 53 4 chr17 55883328 55884419 -39388232 - L1VL2 LINE L1 -2300 1315 176 4 1011 13538 123 29 14 chr17 55884410 55884874 -39387777 - L1Md_F LINE L1 -766 5117 4650 4 1011 2529 70 36 135 chr17 55884874 55885126 -39387525 - MTB LTR MaLR 0 400 193 4 1011 1091 65 0 0 chr17 55885126 55885264 -39387387 - B1_Mus1 SINE Alu -10 138 1 4 1011 2529 70 36 135 chr17 55885264 55885455 -39387196 - MTB LTR MaLR -208 192 1 4 1011 13538 123 29 14 chr17 55885455 55887215 -39385436 - L1Md_F LINE L1 -1234 4649 2860 4 1011 3337 128 34 71 chr17 55887214 55888083 -39384568 - L1VL4 LINE L1 -2496 1321 512 4 1011 1354 57 0 0 chr17 55888179 55888193 -39384458 - B2_Mm1a SINE B2 -18 175 162 4 1011 180 0 0 0 chr17 55888193 55888213 -39384438 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 4 1011 1364 57 0 0 chr17 55888213 55888373 -39384278 - B2_Mm1a SINE B2 -32 161 2 4 1011 23 54 0 0 chr17 55889568 55889605 -39383046 + AT_rich Low_complexity Low_complexity 1 37 0 4 1011 21777 91 8 6 chr17 55893286 55896837 -39375814 - L1_Mus2 LINE L1 0 6566 3014 4 1011 432 0 0 0 chr17 55896837 55896885 -39375766 + (TC)n Simple_repeat Simple_repeat 1 48 0 4 1011 21777 105 7 4 chr17 55896885 55897394 -39375257 - L1_Mus2 LINE L1 -2870 3013 2497 4 1011 2353 214 63 33 chr17 55897387 55898353 -39374298 - L1Md_F LINE L1 -5438 1196 220 4 1011 362 333 0 0 chr17 55898526 55898640 -39374011 - Lx5 LINE L1 -179 7294 7181 4 1011 597 205 0 0 chr17 55898708 55898835 -39373816 + CT-rich Low_complexity Low_complexity 3 129 0 4 1011 435 378 95 19 chr17 55898866 55899130 -39373521 - B4A SINE B4 -8 284 1 4 1011 2369 95 112 0 chr17 55900165 55900566 -39372085 - RLTR47_MM LTR ERV1 -86 446 1 4 1011 1081 297 15 8 chr17 55900595 55900995 -39371656 - RLTR6-int LTR ERV1 -51 7727 7325 4 1011 357 351 10 1 chr17 55901400 55901621 -39371030 - RLTR6-int LTR ERV1 -3202 4576 4269 4 1011 357 325 66 57 chr17 55901672 55902236 -39370415 - RLTR6-int LTR ERV1 -4787 2819 2251 4 1011 7607 68 8 4 chr17 55902239 55903281 -39369370 - L1_Mus3 LINE L1 -5 6633 5588 4 1011 431 277 0 8 chr17 55903321 55903452 -39369199 - RLTR6-int LTR ERV1 -5393 2208 2079 4 1011 266 253 0 33 chr17 55903523 55903613 -39369038 - MuRRS4-int LTR ERV1 -5581 2197 2111 4 1011 268 287 83 21 chr17 55903633 55903825 -39368826 - MuRRS4-int LTR ERV1 -5725 2053 1850 4 1011 2970 80 17 2 chr17 55903857 55904272 -39368379 - BGLII LTR ERVK 0 421 1 4 1011 806 304 68 39 chr17 55904273 55904817 -39367834 - MuRRS4-int LTR ERV1 -3448 1615 1056 4 1011 609 96 331 0 chr17 55905231 55905367 -39367284 - RLTR47_MM LTR ERV1 0 532 352 4 1011 3570 263 100 12 chr17 55905659 55906837 -39365814 - Lx5 LINE L1 -3 7047 5766 4 1011 348 272 11 0 chr17 55907151 55907243 -39365408 + CT-rich Low_complexity Low_complexity 3 95 0 4 1011 1976 201 19 0 chr17 55907832 55908260 -39364391 - Lx5 LINE L1 -93 5784 5349 4 1011 4141 132 33 222 chr17 55908257 55908870 -39363781 - L1_Mur2 LINE L1 -2782 3095 2582 4 1011 611 49 12 0 chr17 55908870 55908951 -39363700 - B1_Mus2 SINE Alu 0 147 66 4 1011 4141 132 33 222 chr17 55908951 55909571 -39363080 - L1_Mur2 LINE L1 -2782 2581 2060 4 1011 381 22 0 0 chr17 55909571 55909617 -39363034 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1011 4141 132 33 222 chr17 55909617 55909817 -39362834 - L1_Mur2 LINE L1 -3818 2059 1868 4 1011 1841 192 0 3 chr17 55909818 55910178 -39362473 - Lx2 LINE L1 -586 6411 6053 4 1011 33200 51 3 1 chr17 55910203 55915338 -39357313 - L1Md_F3 LINE L1 -12 6572 1427 4 1011 908 233 10 10 chr17 55915340 55915535 -39357116 - MTD LTR MaLR -177 242 48 4 1011 4247 138 7 10 chr17 55915543 55916516 -39356135 - L1Md_A LINE L1 -5313 1347 407 4 1011 1046 290 21 11 chr17 55916540 55916826 -39355825 - MTD LTR MaLR -117 302 14 4 1011 324 70 0 0 chr17 55917751 55917794 -39354857 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1011 431 280 56 0 chr17 55918215 55918340 -39354311 - MTD LTR MaLR -9 410 279 4 1011 293 308 0 1 chr17 55918376 55918457 -39354194 - MTD LTR MaLR -128 293 214 4 1011 937 309 34 20 chr17 55918466 55918799 -39353852 + ORR1D1 LTR MaLR 3 366 -12 4 1011 828 335 29 42 chr17 55919106 55919510 -39353141 - MTE2a LTR MaLR -21 398 1 4 1011 594 104 9 36 chr17 55919777 55919887 -39352764 - Lx LINE L1 -13 6641 6535 4 1011 7571 165 27 17 chr17 55919889 55922092 -39350559 - L1VL2 LINE L1 -1235 2380 233 4 1011 796 344 15 33 chr17 55922127 55922461 -39350190 - ORR1D2-int LTR MaLR -1042 328 1 4 1011 777 285 33 28 chr17 55922467 55922621 -39350030 - B3 SINE B2 -2 214 59 4 1011 3304 23 13 0 chr17 55922621 55923012 -39349639 - MTA_Mm LTR MaLR 0 396 1 4 1011 777 285 33 28 chr17 55923012 55923070 -39349581 - B3 SINE B2 -158 58 1 4 1011 417 332 149 13 chr17 55923080 55923315 -39349336 - ORR1D2 LTR MaLR -2 368 102 4 1011 366 123 15 0 chr17 55923431 55923496 -39349155 - Lx2 LINE L1 -8 6989 6924 4 1011 856 327 54 42 chr17 55923709 55924041 -39348610 + MTEb LTR MaLR 1 336 -43 4 1011 267 333 49 0 chr17 55925870 55925972 -39346679 - RMER15 LTR ERVL -14 561 455 4 1011 345 291 62 26 chr17 55926135 55926248 -39346403 - RMER15 LTR ERVL -445 130 14 4 1011 556 327 177 13 chr17 55926524 55926902 -39345749 - RMER15-int LTR ERVL -371 4628 4189 4 1011 981 350 53 35 chr17 55927490 55928398 -39344253 - RMER15-int LTR ERVL -3374 1625 702 4 1011 5744 88 25 4 chr17 55928854 55929661 -39342990 + L1_Mus4 LINE L1 5812 6635 -1 4 1011 466 320 55 0 chr17 55929822 55930003 -39342648 - RMER15 LTR ERVL -87 488 298 4 1011 279 234 52 75 chr17 55930056 55930190 -39342461 - RMER15 LTR ERVL -444 131 1 4 1011 4493 39 0 0 chr17 55932004 55932569 -39340082 + L1Md_F2 LINE L1 5022 5586 -297 4 1011 8040 50 0 3 chr17 55932570 55933553 -39339098 + L1Md_F2 LINE L1 5588 6567 -15 4 1011 21 0 0 0 chr17 55933553 55933574 -39339077 + AT_rich Low_complexity Low_complexity 1 21 0 4 1011 183 184 0 0 chr17 55933815 55933853 -39338798 + (CAT)n Simple_repeat Simple_repeat 2 39 0 4 1011 378 0 0 0 chr17 55934423 55934465 -39338186 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1011 2389 137 2 18 chr17 55935502 55935895 -39336756 + Lx3A LINE L1 6576 6962 -19 4 1011 909 0 0 0 chr17 55935895 55935996 -39336655 + (GAAA)n Simple_repeat Simple_repeat 4 104 0 4 1011 1255 56 9 0 chr17 55935996 55936210 -39336441 + (GGAA)n Simple_repeat Simple_repeat 1 215 0 4 1011 270 0 0 0 chr17 55936557 55936587 -39336064 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1011 308 202 0 25 chr17 55936600 55936681 -39335970 + (CATATA)n Simple_repeat Simple_repeat 4 82 0 4 1011 486 0 0 0 chr17 55937090 55937144 -39335507 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 1011 266 226 32 16 chr17 55938022 55938148 -39334503 - Lx9 LINE L1 -15 7629 7502 4 1011 543 151 0 0 chr17 55939084 55939177 -39333474 + (TA)n Simple_repeat Simple_repeat 2 94 0 4 1011 255 200 0 0 chr17 55939291 55939331 -39333320 + 7SK RNA RNA 38 77 -254 4 1011 985 306 46 23 chr17 55939413 55939758 -39332893 - ORR1E LTR MaLR 0 359 7 4 1011 235 255 53 0 chr17 55940183 55940277 -39332374 - RMER5 LTR ERV1 -133 401 303 4 1011 523 316 156 31 chr17 55940558 55941006 -39331645 - RMER5 LTR ERV1 -8 526 23 4 1011 522 368 25 50 chr17 55941755 55942035 -39330616 - B4A SINE B4 -14 278 6 4 1011 5181 74 12 4 chr17 55942343 55943033 -39329618 - Lx3_Mus LINE L1 -8 7001 6307 4 1011 191 237 79 63 chr17 55943553 55943616 -39329035 - L2 LINE L2 -523 2896 2833 4 1011 270 0 0 0 chr17 55943649 55943679 -39328972 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 4 1011 244 0 56 0 chr17 55944252 55944288 -39328363 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 4 1011 1128 65 0 0 chr17 55944291 55944430 -39328221 - B1_Mus1 SINE Alu -5 143 5 4 1011 365 365 62 6 chr17 55944489 55944649 -39328002 + B4A SINE B4 120 288 -4 4 1011 264 153 19 48 chr17 55944797 55944900 -39327751 + (CATA)n Simple_repeat Simple_repeat 4 103 0 4 1011 432 317 132 47 chr17 55945051 55945286 -39327365 - RMER15 LTR ERVL -112 463 209 4 1011 1533 266 28 11 chr17 55945286 55945758 -39326893 - Lx2B LINE L1 -5 6995 6516 4 1011 1807 146 53 0 chr17 55945775 55946077 -39326574 + ORR1A2 LTR MaLR 10 327 0 4 1011 3796 183 61 7 chr17 55946077 55946913 -39325738 + ORR1A2-int LTR MaLR 1 881 -911 4 1011 1354 150 61 30 chr17 55946913 55947208 -39325443 + RMER1B Other Other 754 1057 -9 4 1011 531 0 0 0 chr17 55947534 55947593 -39325058 + (GA)n Simple_repeat Simple_repeat 2 60 0 4 1011 5559 130 46 5 chr17 55947594 55948484 -39324167 + ORR1A2-int LTR MaLR 1037 1963 0 4 1011 1817 122 95 0 chr17 55948486 55948782 -39323869 + ORR1A2 LTR MaLR 3 326 -1 4 1011 4532 184 12 25 chr17 55948784 55949890 -39322761 - Lx2B LINE L1 -482 6518 5430 4 1011 254 301 47 40 chr17 55950237 55950386 -39322265 - RMER15 LTR ERVL -425 150 1 4 1011 245 146 55 0 chr17 55950470 55950525 -39322126 - L1M4 LINE L1 -370 5814 5757 4 1011 234 403 50 16 chr17 55950861 55950982 -39321669 - RSINE1 SINE B4 -6 159 35 4 1011 7838 43 2 3 chr17 55951005 55952253 -39320398 - L1Md_F2 LINE L1 0 6582 5335 4 1011 390 322 51 83 chr17 55952282 55952499 -39320152 + B3 SINE B2 4 213 -3 4 1011 222 91 0 0 chr17 55952943 55952976 -39319675 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 4 1011 21 0 0 0 chr17 55953333 55953354 -39319297 + AT_rich Low_complexity Low_complexity 1 21 0 4 1011 24 0 0 0 chr17 55953860 55953884 -39318767 + AT_rich Low_complexity Low_complexity 1 24 0 4 1011 518 218 0 0 chr17 55953977 55954087 -39318564 - ID_B1 SINE B4 -1 223 114 4 1011 366 289 31 69 chr17 55954861 55954988 -39317663 - MER58B DNA MER1_type -9 332 211 4 1011 2113 214 27 15 chr17 55954988 55955509 -39317142 - RLTR11A2 LTR ERVK 0 527 1 4 1011 366 289 31 69 chr17 55955509 55955541 -39317110 - MER58B DNA MER1_type -131 210 179 4 1011 557 359 18 24 chr17 55956675 55957009 -39315642 - Lx8 LINE L1 -136 7337 7006 4 1011 329 62 0 20 chr17 55957013 55957062 -39315589 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 1011 1132 91 0 0 chr17 55957174 55957317 -39315334 + B1_Mus1 SINE Alu 1 143 -5 4 1011 549 0 0 0 chr17 55957318 55957379 -39315272 + (TA)n Simple_repeat Simple_repeat 2 62 0 4 1011 1192 199 17 97 chr17 55957392 55957681 -39314970 - ORR1B1 LTR MaLR -127 267 2 4 1011 588 355 94 20 chr17 55958376 55958675 -39313976 - MTE2b LTR MaLR 0 379 59 4 1011 304 300 0 12 chr17 55958675 55958756 -39313895 - MTE2b LTR MaLR -280 99 20 4 1011 545 290 25 6 chr17 55958771 55958934 -39313717 - MTE2b-int LTR MaLR -1 1579 1414 4 1011 917 297 206 5 chr17 55958984 55959718 -39312933 - Lx6 LINE L1 -25 7435 6555 4 1011 198 0 0 0 chr17 55960700 55960722 -39311929 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 1011 4297 51 4 5 chr17 55961062 55961613 -39311038 + LTRIS_Mus LTR ERV1 38 587 0 4 1011 888 228 25 33 chr17 55961615 55961856 -39310795 - Lx5 LINE L1 -1020 6030 5792 4 1011 195 100 0 0 chr17 55961856 55961886 -39310765 + (TTA)n Simple_repeat Simple_repeat 2 31 0 4 1011 6579 190 21 7 chr17 55961886 55963244 -39309407 - Lx3C LINE L1 -13 6963 5587 5 1011 6353 172 28 29 chr17 55963242 55964322 -39308329 - Lx3C LINE L1 -411 5466 4394 5 1011 3351 94 11 13 chr17 55964322 55964798 -39307853 - MT2C_Mm LTR ERVL 0 475 1 5 1011 6353 172 28 29 chr17 55964798 55965136 -39307515 - Lx3C LINE L1 -1484 4393 4050 5 1011 21235 98 4 84 chr17 55965129 55965826 -39306825 - L1_Mus2 LINE L1 -587 5979 5300 5 1011 2273 89 0 0 chr17 55965826 55966129 -39306522 - L1_Mus2 LINE L1 0 6566 6264 5 1011 21235 122 10 193 chr17 55966129 55966797 -39305854 - L1_Mus2 LINE L1 -584 5299 4629 5 1011 450 36 0 0 chr17 55966797 55966853 -39305798 + (TTG)n Simple_repeat Simple_repeat 2 57 0 5 126 21235 119 10 171 chr17 55966853 55971735 -39300916 - L1_Mus2 LINE L1 -1255 4628 776 5 1012 236 114 0 0 chr17 55971738 55971773 -39300878 - L1_Mus2 LINE L1 -6260 397 363 5 1012 306 0 0 0 chr17 55971793 55971827 -39300824 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 5 1012 1068 94 0 0 chr17 55971827 55971965 -39300686 - B1_Mus2 SINE Alu -9 138 1 5 1012 1533 105 32 0 chr17 55971975 55972222 -39300429 - MusHAL1 LINE L1 -1592 1120 866 5 1012 192 40 0 0 chr17 55972273 55972298 -39300353 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 5 1012 1320 201 111 0 chr17 55972299 55972688 -39299963 - Lx3C LINE L1 -2834 3046 2615 5 1012 1931 246 34 11 chr17 55972770 55973358 -39299293 - Lx3C LINE L1 -3989 1891 1287 5 1012 180 0 0 0 chr17 55973358 55973378 -39299273 + (TTA)n Simple_repeat Simple_repeat 2 21 0 5 1012 1931 249 38 11 chr17 55973378 55973478 -39299173 - Lx3C LINE L1 -6442 1286 1187 5 1012 37414 32 0 0 chr17 55973507 55978920 -39293731 - L1Md_T LINE L1 0 6582 1170 5 1012 5145 166 19 27 chr17 55978926 55980037 -39292614 - L1Md_T LINE L1 -5411 1205 104 5 1012 601 288 60 9 chr17 55980098 55980413 -39292238 - L1_Mur3 LINE L1 -6507 1205 875 5 1012 321 26 0 0 chr17 55980413 55980451 -39292200 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 5 1012 289 244 11 17 chr17 55981787 55981966 -39290685 + (CAT)n Simple_repeat Simple_repeat 3 180 0 5 1012 355 337 6 11 chr17 55982078 55982255 -39290396 + (CAT)n Simple_repeat Simple_repeat 3 178 0 5 1012 23 0 0 0 chr17 55982297 55982320 -39290331 + AT_rich Low_complexity Low_complexity 1 23 0 5 1012 226 287 56 0 chr17 55983259 55983367 -39289284 - L1M4 LINE L1 -1822 4324 4211 5 1012 4249 212 26 9 chr17 55983365 55984335 -39288316 - Lx2B LINE L1 -428 6572 5587 5 1012 4642 227 120 5 chr17 55984351 55984836 -39287815 - Lx4A LINE L1 -723 6335 5752 5 1012 465 103 0 0 chr17 55984836 55984904 -39287747 + (CTATT)n Simple_repeat Simple_repeat 2 69 0 5 1012 4642 194 20 12 chr17 55984904 55985829 -39286822 - Lx4A LINE L1 -126 5751 4830 5 1012 6332 191 24 89 chr17 55985822 55987320 -39285331 - Lx4A LINE L1 -1723 4154 2805 5 1012 340 19 19 37 chr17 55987320 55987374 -39285277 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 5 1012 6332 191 24 89 chr17 55987374 55987830 -39284821 - Lx4A LINE L1 -3073 2804 2330 5 1012 612 339 26 5 chr17 55988150 55988340 -39284311 - B3 SINE B2 -16 200 7 5 1012 474 70 0 0 chr17 55988911 55988982 -39283669 + (TG)n Simple_repeat Simple_repeat 2 72 0 5 1012 303 278 42 0 chr17 55988995 55989067 -39283584 - HAL1-3A_ME LINE L1 -809 2049 1975 5 1012 258 105 0 0 chr17 55989223 55989261 -39283390 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 5 1012 568 216 64 43 chr17 55990761 55990901 -39281750 - B1_Mur4 SINE Alu -1 149 7 5 1012 219 173 0 51 chr17 55991289 55991368 -39281283 + (TTA)n Simple_repeat Simple_repeat 3 77 0 5 1012 630 321 111 30 chr17 55991396 55991666 -39280985 - B4A SINE B4 0 292 1 5 1012 409 215 126 65 chr17 55991959 55992173 -39280478 - Lx9 LINE L1 -8 7636 7410 5 1012 769 204 36 0 chr17 55992169 55992336 -39280315 + Lx9 LINE L1 7246 7418 -226 5 1012 278 265 183 30 chr17 55993271 55993473 -39279178 - Lx8 LINE L1 0 7473 7241 5 1012 5200 91 42 33 chr17 55993836 55995166 -39277485 + L1VL1 LINE L1 221 1550 -2148 5 1012 1033 62 8 0 chr17 55995167 55995296 -39277355 + B1_Mus2 SINE Alu 2 131 -16 5 1012 22 35 0 0 chr17 55995296 55995325 -39277326 + AT_rich Low_complexity Low_complexity 1 29 0 5 1012 5871 96 7 11 chr17 55995757 55996599 -39276052 - L1_Mus4 LINE L1 -5 6631 5793 5 1012 3103 47 13 8 chr17 55996598 55996984 -39275667 + L1_Mus1 LINE L1 6168 6555 -12 5 1012 6136 143 3 6 chr17 55996991 55998035 -39274616 - L1_Mm LINE L1 -75 5808 4768 5 1012 8537 138 30 11 chr17 55998042 56000000 -39272651 - Lx2 LINE L1 0 6997 5008 5 1012 10188 157 86 15 chr17 56000000 56002246 -39270405 - L1_Mur1 LINE L1 -879 5007 2601 1 1012 4045 118 8 6 chr17 56002341 56002965 -39269686 - L1VL4 LINE L1 -5484 818 194 2 1012 1924 241 22 4 chr17 56002972 56003422 -39269229 + MERVK26-int LTR ERVK 6167 6624 -295 3 1012 230 361 62 54 chr17 56003422 56003437 -39269214 - RSINE1 SINE B4 -34 131 2 4 1012 490 251 20 6 chr17 56003437 56003551 -39269100 - B3 SINE B2 -82 111 1 5 1012 446 269 53 15 chr17 56003568 56003700 -39268951 - B1_Mur2 SINE Alu -12 137 1 6 1012 498 317 25 27 chr17 56004496 56004844 -39267807 - MurSatRep1 Unknown Unknown -88 2049 1747 7 1012 434 265 9 9 chr17 56004798 56005274 -39267377 - MMSAT4 Satellite Satellite 0 476 1 8 1012 368 336 25 20 chr17 56005129 56005405 -39267246 - MurSatRep1 Unknown Unknown -88 2049 1836 9 1012 2154 219 52 12 chr17 56005448 56006020 -39266631 - MurSatRep1 Unknown Unknown -89 2048 1454 1 1012 2484 198 48 45 chr17 56006021 56006210 -39266441 + RLTR20B1 LTR ERVK 1 185 -378 1 1012 183 42 0 0 chr17 56006210 56006234 -39266417 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1012 2484 198 48 45 chr17 56006234 56006509 -39266142 + RLTR20B1 LTR ERVK 186 467 -96 1 1012 207 0 0 0 chr17 56006509 56006532 -39266119 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1012 2484 198 48 45 chr17 56006532 56006627 -39266024 + RLTR20B1 LTR ERVK 468 561 -2 1 1012 3474 213 80 64 chr17 56006633 56006744 -39265907 - MurSatRep1 Unknown Unknown -686 1451 1340 1 1012 2592 158 94 38 chr17 56006744 56007276 -39265375 + RLTR12A LTR ERVK 3 564 -4 1 1012 3474 213 80 64 chr17 56007276 56008295 -39264356 - MurSatRep1 Unknown Unknown -798 1339 303 1 1012 12420 102 19 6 chr17 56008295 56010119 -39262532 + RLTR22_Mur LTR ERVK 1 1848 0 1 1012 663 259 15 0 chr17 56010155 56010290 -39262361 + B1_Mur4 SINE Alu 11 147 -3 1 1012 180 0 0 0 chr17 56010312 56010332 -39262319 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1012 350 248 24 16 chr17 56010332 56010455 -39262196 - MurSatRep1 Unknown Unknown -2007 130 7 1 1012 21 0 0 0 chr17 56010555 56010576 -39262075 + GC_rich Low_complexity Low_complexity 1 21 0 1 1012 292 364 35 43 chr17 56010661 56010776 -39261875 + B3A SINE B2 39 152 -46 1 1012 1099 185 16 5 chr17 56011243 56011433 -39261218 - ORR1B1 LTR MaLR -8 386 195 2 1012 368 207 0 0 chr17 56011433 56011491 -39261160 - PB1D9 SINE Alu -60 60 3 2 1012 856 188 262 67 chr17 56011491 56011703 -39260948 - MT2B LTR ERVL -342 259 1 2 1012 259 98 0 0 chr17 56011704 56011745 -39260906 - MERVL_2A-int LTR ERVL -2 5759 5719 2 1012 1325 169 11 50 chr17 56011746 56011759 -39260892 - ORR1B1-int LTR MaLR -1324 639 629 2 1012 4894 104 16 10 chr17 56011759 56012470 -39260181 + RLTR19B LTR ERVK 1 715 0 2 1012 1325 169 11 50 chr17 56012470 56012737 -39259914 - ORR1B1-int LTR MaLR -1335 628 370 2 1012 12437 85 15 36 chr17 56012738 56014566 -39258085 + L1VL2 LINE L1 62 1793 -1822 2 1012 1498 58 16 0 chr17 56014566 56014756 -39257895 + B2_Mm2 SINE B2 2 194 -1 2 1012 12437 79 25 54 chr17 56014756 56015927 -39256724 + L1VL2 LINE L1 1794 2988 -627 2 1012 2282 166 0 15 chr17 56016003 56016395 -39256256 - ORR1B1-int LTR MaLR -1577 386 1 2 1012 1907 162 16 77 chr17 56016397 56016772 -39255879 - ORR1B1 LTR MaLR -2 392 41 2 1012 586 262 119 102 chr17 56016771 56017064 -39255587 - MTE-int LTR MaLR -65 1515 1218 2 1012 1612 123 3 55 chr17 56017062 56017354 -39255297 + RLTR22_Mur LTR ERVK 904 1180 -668 2 1012 325 343 77 18 chr17 56017549 56017822 -39254829 + L1MC LINE L1 4777 5065 -1081 2 1012 417 213 143 32 chr17 56019083 56019209 -39253442 + B1_Mus1 SINE Alu 9 148 0 2 1012 9711 143 46 102 chr17 56019281 56020337 -39252314 - L1_Mur1 LINE L1 -1055 4831 3750 3 1012 3085 66 2 5 chr17 56020337 56020734 -39251917 - MTA_Mm LTR MaLR 0 396 1 3 1012 9711 143 46 102 chr17 56020734 56020933 -39251718 - L1_Mur1 LINE L1 -2137 3749 3554 3 1012 415 218 75 10 chr17 56020933 56021132 -39251519 + RMER17D LTR ERVK 287 498 -391 3 1012 9711 143 46 102 chr17 56021132 56021768 -39250883 - L1_Mur1 LINE L1 -2137 3553 2923 3 1012 1003 155 0 0 chr17 56021768 56021910 -39250741 - B1_Mus1 SINE Alu -5 143 2 3 1012 9711 143 46 102 chr17 56021910 56022096 -39250555 - L1_Mur1 LINE L1 -2964 2922 2691 3 1012 243 0 0 0 chr17 56022096 56022123 -39250528 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 3 1012 9711 143 46 102 chr17 56022123 56022205 -39250446 - L1_Mur1 LINE L1 -3196 2690 2606 3 1012 355 331 39 28 chr17 56022293 56022473 -39250178 - MurERV4-int LTR ERVK -3222 2945 2674 3 1012 3675 180 74 95 chr17 56022767 56023689 -39248962 - RMER19B LTR ERVK 0 902 1 3 1012 640 216 91 54 chr17 56024273 56024459 -39248192 + B2_Mm2 SINE B2 2 194 -1 3 1012 2070 220 34 20 chr17 56026156 56026601 -39246050 - RMER6B LTR ERVK -10 451 1 3 1012 520 184 48 0 chr17 56026601 56026704 -39245947 - RMER6B LTR ERVK -349 112 5 3 1012 2885 131 9 40 chr17 56026710 56027236 -39245415 - MYSERV6-int LTR ERVK -395 8564 8055 4 1012 1430 88 185 0 chr17 56027288 56027537 -39245114 + RLTR10A LTR ERVK 117 411 0 4 1012 1031 128 29 34 chr17 56027537 56027875 -39244776 - MYSERV6-int LTR ERVK -900 8059 7778 4 1012 269 284 0 15 chr17 56027903 56027971 -39244680 + RLTR19 LTR ERVK 10 76 -639 4 1012 1077 141 0 0 chr17 56027971 56028276 -39244375 + (GAA)n Simple_repeat Simple_repeat 1 305 0 4 1012 346 274 8 89 chr17 56028287 56028411 -39244240 + RLTR19 LTR ERVK 95 208 -291 4 1012 1942 221 31 106 chr17 56028417 56028684 -39243967 - RLTR21 LTR ERVK 0 1572 1309 4 1012 588 53 0 0 chr17 56028684 56028760 -39243891 + (CA)n Simple_repeat Simple_repeat 1 76 0 4 1012 1942 221 31 106 chr17 56028760 56028797 -39243854 - RLTR21 LTR ERVK -264 1308 1303 4 1012 395 36 0 35 chr17 56028797 56028855 -39243796 + (CATA)n Simple_repeat Simple_repeat 1 56 0 4 1012 4342 185 22 86 chr17 56028855 56029114 -39243537 - RLTR21 LTR ERVK -266 1306 1059 4 1012 396 103 0 0 chr17 56029114 56029172 -39243479 + (TA)n Simple_repeat Simple_repeat 1 58 0 4 1012 4342 154 14 68 chr17 56029172 56029530 -39243121 - RLTR21 LTR ERVK -393 1179 843 4 1012 180 0 0 0 chr17 56029530 56029550 -39243101 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 1012 1175 64 0 0 chr17 56029552 56029693 -39242958 - B1_Mm SINE Alu -6 141 1 4 1012 4342 154 14 68 chr17 56029693 56030097 -39242554 - RLTR21 LTR ERVK -730 842 451 4 1012 465 221 66 37 chr17 56030503 56030639 -39242012 - B1_Mus1 SINE Alu 0 148 9 5 1012 334 304 66 3 chr17 56032740 56032903 -39239748 + ORR1E-int LTR MaLR 1197 1527 -53 5 1012 287 321 67 62 chr17 56032903 56033082 -39239569 + ORR1E LTR MaLR 1 180 -190 5 1012 1504 206 36 28 chr17 56033455 56033787 -39238864 - RLTR19C LTR ERVK 0 506 172 5 1012 2175 105 12 22 chr17 56033787 56034109 -39238542 + ORR1A2 LTR MaLR 1 319 -8 5 1012 760 201 92 0 chr17 56034099 56034263 -39238388 - RLTR19C LTR ERVK -310 196 18 5 1012 276 289 17 9 chr17 56034616 56034731 -39237920 + MurSatRep1 Unknown Unknown 11 126 -2011 5 1012 475 259 36 22 chr17 56034738 56034876 -39237775 - B1_Mur2 SINE Alu -5 144 5 5 1012 5971 216 48 47 chr17 56034904 56035885 -39236766 + MurSatRep1 Unknown Unknown 318 1273 -864 5 1012 1657 145 207 31 chr17 56035885 56036277 -39236374 + RMER6B LTR ERVK 1 461 0 5 1012 5971 216 48 47 chr17 56036277 56037057 -39235594 + MurSatRep1 Unknown Unknown 1274 2081 -56 5 1012 485 304 15 10 chr17 56037162 56037358 -39235293 + MurSatRep1 Unknown Unknown 1853 2049 -88 5 1012 559 245 7 7 chr17 56037211 56037521 -39235130 + MMSAT4 Satellite Satellite 1 310 0 5 1012 453 338 20 20 chr17 56037475 56037946 -39234705 + MurSatRep1 Unknown Unknown 1747 2049 -88 6 1012 500 273 5 5 chr17 56037705 56037988 -39234663 + MMSAT4 Satellite Satellite 1 283 0 6 1012 1138 82 0 0 chr17 56038097 56038243 -39234408 + B1_Mm SINE Alu 2 147 0 6 1012 21 0 0 0 chr17 56038847 56038868 -39233783 + AT_rich Low_complexity Low_complexity 1 21 0 6 1012 1143 127 72 0 chr17 56038922 56039103 -39233548 - B2_Mm2 SINE B2 0 195 2 6 1012 534 241 42 7 chr17 56039167 56039309 -39233342 + B1_Mur2 SINE Alu 1 147 -2 6 1012 544 307 19 7 chr17 56039323 56039499 -39233152 + B3 SINE B2 1 188 -10 6 1012 1254 20 7 0 chr17 56039539 56039685 -39232966 + B1_Mus1 SINE Alu 2 148 0 6 1012 432 0 0 0 chr17 56040119 56040167 -39232484 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 1012 6748 107 32 10 chr17 56040561 56042262 -39230389 + Lx LINE L1 4920 6652 -2 6 1012 205 221 46 37 chr17 56043690 56043798 -39228853 + (TGAG)n Simple_repeat Simple_repeat 3 111 0 7 1012 225 257 112 100 chr17 56043966 56044126 -39228525 + RLTR25A LTR ERVK 936 1097 -6 7 1012 2159 239 46 81 chr17 56044946 56045463 -39227188 + RMER19C LTR ERVK 1 497 -114 7 1012 2060 129 31 3 chr17 56045463 56045781 -39226870 - ORR1A2 LTR MaLR 0 327 1 7 1012 2159 239 46 81 chr17 56045781 56045896 -39226755 + RMER19C LTR ERVK 498 611 0 7 1012 7008 104 2 10 chr17 56045907 56046354 -39226297 + MurERV4_19-int LTR ERVK 1583 2154 -3626 7 1012 3105 68 2 2 chr17 56046354 56046754 -39225897 - MTB LTR MaLR 0 400 1 7 1012 13371 126 17 14 chr17 56046754 56048524 -39224127 + MurERV4_19-int LTR ERVK 1744 3985 -1795 7 1012 1228 97 23 0 chr17 56048524 56048700 -39223951 + B2_Mm2 SINE B2 2 181 -14 7 1012 13371 112 15 12 chr17 56048700 56049275 -39223376 + MurERV4_19-int LTR ERVK 3986 4552 -1228 7 1012 1628 219 134 48 chr17 56049278 56049687 -39222964 + RLTR20B3 LTR ERVK 21 480 -97 7 1012 1212 82 66 6 chr17 56049687 56049870 -39222781 - B2_Mm2 SINE B2 0 195 2 7 1012 1628 219 134 48 chr17 56049870 56049921 -39222730 + RLTR20B3 LTR ERVK 481 521 -56 7 1012 24 0 0 0 chr17 56049929 56049953 -39222698 + AT_rich Low_complexity Low_complexity 1 24 0 7 1012 361 287 41 63 chr17 56050007 56050278 -39222373 + L1_Mur1 LINE L1 3 267 -6717 8 1012 2589 136 184 5 chr17 56050247 56050317 -39222334 + L1_Mur1 LINE L1 674 743 -6241 8 1012 1867 119 111 10 chr17 56050317 56050614 -39222037 - ORR1A2 LTR MaLR 0 327 1 8 1012 19944 123 39 5 chr17 56050614 56054434 -39218217 + L1_Mur1 LINE L1 744 4734 -1152 8 1012 1837 116 0 32 chr17 56054432 56054745 -39217906 - L1_Mur1 LINE L1 -589 5297 4995 8 1012 310 0 67 0 chr17 56054745 56054790 -39217861 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 8 1012 793 146 0 8 chr17 56055328 56055459 -39217192 - L1_Mur1 LINE L1 -882 5004 4875 8 1012 2810 137 20 11 chr17 56055459 56055917 -39216734 + Lx3C LINE L1 6497 6958 -18 8 1012 450 0 0 0 chr17 56055941 56055991 -39216660 + (TG)n Simple_repeat Simple_repeat 2 51 0 8 1012 26 0 0 0 chr17 56055991 56056017 -39216634 + AT_rich Low_complexity Low_complexity 1 26 0 8 1012 1229 82 6 0 chr17 56056608 56056767 -39215884 + B2_Mm1t SINE B2 1 160 -33 8 1012 315 0 0 0 chr17 56056767 56056802 -39215849 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 8 1012 1171 125 0 17 chr17 56056802 56056821 -39215830 + B2_Mm2 SINE B2 159 176 -19 8 1012 1142 84 0 0 chr17 56057012 56057155 -39215496 + B1_Mm SINE Alu 5 147 0 9 1012 4568 173 25 48 chr17 56057280 56058233 -39214418 + MYSERV16_I-int LTR ERVK 1 1334 -1508 9 1012 264 235 143 67 chr17 56058236 56058290 -39214361 + RMER4A LTR ERVK 296 345 -121 9 1012 4599 52 33 5 chr17 56058290 56058869 -39213782 - L1Md_F2 LINE L1 -2 6580 5986 9 1012 264 235 143 67 chr17 56058869 56058919 -39213732 + RMER4A LTR ERVK 346 407 -59 9 1012 1422 84 16 10 chr17 56058930 56059122 -39213529 + B2_Mm2 SINE B2 2 194 -1 9 1012 201 74 0 0 chr17 56059170 56059197 -39213454 + (T)n Simple_repeat Simple_repeat 1 27 0 9 1012 771 71 0 0 chr17 56059197 56059295 -39213356 - B1_Mm SINE Alu 0 147 50 9 1012 228 300 24 59 chr17 56059232 56059317 -39213334 - MT2B2 LTR ERVL -320 264 183 9 1012 1231 133 18 13 chr17 56059317 56059545 -39213106 - MYSERV16_I-int LTR ERVK -1034 1292 1064 9 1012 1224 34 0 20 chr17 56059545 56059695 -39212956 + B1_Mm SINE Alu 1 147 0 9 1012 1221 119 11 0 chr17 56059734 56059910 -39212741 + B2_Mm1t SINE B2 2 179 -14 1 1012 363 79 313 26 chr17 56059942 56060057 -39212594 + B2_Mm2 SINE B2 47 194 -1 1 1012 4799 151 37 2 chr17 56060057 56060887 -39211764 + MYSERV16_I-int LTR ERVK 1306 2164 -162 9 1012 313 121 34 17 chr17 56060888 56060947 -39211704 + MYSERV16_I-int LTR ERVK 2267 2326 0 9 1012 1251 236 119 52 chr17 56060947 56061425 -39211226 + RLTR11A LTR ERVK 16 525 -3 9 1012 2868 93 83 14 chr17 56061425 56061519 -39211132 + MurERV4_19-int LTR ERVK 4546 4674 -1106 1 1012 2050 104 58 58 chr17 56061519 56061845 -39210806 - ORR1A3 LTR MaLR 0 326 1 1 1012 2868 93 83 14 chr17 56061845 56062196 -39210455 + MurERV4_19-int LTR ERVK 4675 5022 -758 1 1012 398 73 0 42 chr17 56062192 56062263 -39210388 + MurERV4_19-int LTR ERVK 5699 5766 -14 1 1012 21 82 0 0 chr17 56062263 56062312 -39210339 + AT_rich Low_complexity Low_complexity 1 49 0 1 1012 21 36 0 0 chr17 56062382 56062410 -39210241 + AT_rich Low_complexity Low_complexity 1 28 0 1 1012 1356 64 40 6 chr17 56062742 56062916 -39209735 + B2_Mm2 SINE B2 1 180 -15 1 1012 588 29 0 0 chr17 56062916 56062986 -39209665 + (GAAA)n Simple_repeat Simple_repeat 3 72 0 1 1012 15367 64 4 14 chr17 56062996 56066988 -39205663 + L1Md_F LINE L1 352 5221 -662 1 1012 1236 44 0 0 chr17 56066988 56067146 -39205505 + L1Md_F2 LINE L1 6425 6582 0 1 1012 8065 88 16 0 chr17 56067281 56067375 -39205276 - MusHAL1 LINE L1 -626 2086 1991 1 1012 459 0 0 0 chr17 56067375 56067426 -39205225 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 1 1012 8065 88 16 0 chr17 56067426 56068454 -39204197 - MusHAL1 LINE L1 -722 1990 947 1 1012 1426 270 128 100 chr17 56068487 56069099 -39203552 + RMER19A LTR ERVK 1 639 -98 1 1012 2997 24 0 0 chr17 56069099 56069436 -39203215 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 1012 1426 270 128 100 chr17 56069436 56069540 -39203111 + RMER19A LTR ERVK 640 737 0 1 1012 1487 180 11 15 chr17 56069540 56069811 -39202840 + Lx4B LINE L1 6530 6799 -259 1 1012 216 0 0 0 chr17 56070355 56070379 -39202272 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1012 383 15 14 70 chr17 56070533 56070604 -39202047 + (TCTG)n Simple_repeat Simple_repeat 4 70 0 1 1012 711 95 0 6 chr17 56070729 56070851 -39201800 + B1_Mus2 SINE Alu 30 148 0 1 1012 280 89 16 125 chr17 56071045 56071109 -39201542 + MMVL30-int LTR ERV1 772 828 -2870 1 1012 530 273 26 93 chr17 56071190 56071416 -39201235 + MMVL30-int LTR ERV1 842 1052 -2646 1 1012 423 283 0 0 chr17 56071564 56071702 -39200949 + (CAAGG)n Simple_repeat Simple_repeat 5 142 0 1 1012 587 201 29 70 chr17 56071916 56072087 -39200564 + MMVL30-int LTR ERV1 1349 1512 -2186 1 1012 224 322 0 0 chr17 56072195 56072254 -39200397 + B1F2 SINE Alu 1 59 -90 1 1012 672 199 13 32 chr17 56072280 56072452 -39200199 + MMVL30-int LTR ERV1 1516 1663 -2035 1 1012 1245 179 21 83 chr17 56072441 56072721 -39199930 + MMVL30-int LTR ERV1 1779 2008 -1690 1 1012 947 322 65 31 chr17 56072738 56073325 -39199326 + MMVL30-int LTR ERV1 3681 4287 -3165 1 1012 2509 176 132 27 chr17 56073330 56073950 -39198701 + RMER13B LTR ERVK 215 899 -9 1 1012 796 193 13 0 chr17 56073968 56074118 -39198533 + Lx4B LINE L1 6802 6953 -105 1 1012 264 310 100 19 chr17 56074150 56074393 -39198258 - LTRIS_Mus LTR ERV1 -54 533 205 1 1012 358 232 30 10 chr17 56074547 56074647 -39198004 + Lx4B LINE L1 6957 7058 0 1 1012 396 0 0 0 chr17 56074699 56074743 -39197908 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 1 1012 204 171 0 24 chr17 56074743 56074785 -39197866 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1012 305 181 61 79 chr17 56074794 56074908 -39197743 + L1MB7 LINE L1 6038 6149 -35 1 1012 2278 92 16 3 chr17 56075500 56075816 -39196835 + ORR1A2 LTR MaLR 1 320 -7 1 1012 1218 61 104 0 chr17 56075959 56076122 -39196529 - B2_Mm2 SINE B2 -14 181 2 1 1012 360 0 0 0 chr17 56076145 56076185 -39196466 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 1012 378 0 0 0 chr17 56076185 56076226 -39196425 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1012 247 345 79 12 chr17 56076228 56076387 -39196264 - B3A SINE B2 -48 168 1 1 1012 315 281 243 12 chr17 56076602 56076775 -39195876 - B3 SINE B2 -3 213 1 1 1012 451 250 129 0 chr17 56076800 56076932 -39195719 - B1_Mur2 SINE Alu 0 149 1 1 1012 1065 93 0 0 chr17 56076994 56077133 -39195518 + B2_Mm2 SINE B2 1 139 -56 1 1012 648 0 0 0 chr17 56077141 56077213 -39195438 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 1 1012 347 369 0 0 chr17 56077379 56077536 -39195115 - RSINE1 SINE B4 -6 159 3 1 1012 586 333 35 28 chr17 56077999 56078558 -39194093 - MurSatRep1 Unknown Unknown 0 2137 1833 1 1012 602 229 7 7 chr17 56078558 56078699 -39193952 - MMSAT4 Satellite Satellite -1 167 27 1 1012 586 333 35 28 chr17 56078699 56078855 -39193796 - MurSatRep1 Unknown Unknown 0 1832 1747 1 1012 6934 210 47 27 chr17 56078955 56079708 -39192943 - MurSatRep1 Unknown Unknown -89 2048 1274 1 1012 1649 153 207 31 chr17 56079708 56080100 -39192551 - RMER6B LTR ERVK 0 461 1 1 1012 6934 210 47 27 chr17 56080100 56081062 -39191589 - MurSatRep1 Unknown Unknown -864 1273 300 1 1012 290 294 18 89 chr17 56081073 56081185 -39191466 + MT2B LTR ERVL 154 257 -344 1 1012 720 238 7 0 chr17 56081087 56081224 -39191427 + B1_Mur2 SINE Alu 6 143 -6 1 1012 252 0 0 0 chr17 56081224 56081252 -39191399 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1012 195 42 0 0 chr17 56081383 56081407 -39191244 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1012 520 341 103 40 chr17 56081690 56082060 -39190591 - MTE-int LTR MaLR -901 679 287 1 1012 939 261 100 33 chr17 56082072 56082432 -39190219 - ORR1C2 LTR MaLR 0 384 1 1 1012 277 208 12 49 chr17 56082461 56082542 -39190109 + GA-rich Low_complexity Low_complexity 1 78 0 1 1012 274 197 87 43 chr17 56083274 56083343 -39189308 + RLTR42-int LTR ERVK 1656 1727 -3795 1 1012 1213 54 0 0 chr17 56083769 56083916 -39188735 - B1_Mus1 SINE Alu 0 148 2 1 1012 337 359 74 15 chr17 56084023 56084292 -39188359 + L1MC LINE L1 4781 5065 -1081 1 1012 459 229 66 37 chr17 56085547 56085683 -39186968 + B1_Mus1 SINE Alu 9 148 0 1 1012 244 267 132 13 chr17 56086224 56086376 -39186275 + L1M4 LINE L1 3115 3284 -2862 1 1012 318 362 28 7 chr17 56086394 56086536 -39186115 + B1F SINE Alu 1 145 -4 1 1012 317 43 21 0 chr17 56086598 56086645 -39186006 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 1 1012 457 316 122 0 chr17 56086712 56086851 -39185800 + RSINE1 SINE B4 2 157 -8 1 1012 302 0 26 0 chr17 56086875 56086913 -39185738 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1012 1159 59 0 0 chr17 56086913 56087049 -39185602 - B1_Mus1 SINE Alu -11 137 2 1 1012 1191 74 0 0 chr17 56088362 56088510 -39184141 + B1_Mus1 SINE Alu 1 148 0 1 1012 945 120 80 0 chr17 56088618 56088768 -39183883 - RLTR33 LTR ERVK -344 334 173 1 1012 938 233 8 121 chr17 56088754 56088993 -39183658 - RMER19C LTR ERVK -128 483 272 1 1012 3898 203 53 56 chr17 56089357 56090306 -39182345 + RMER17B LTR ERVK 1 946 -12 1 1012 218 261 43 0 chr17 56090539 56090608 -39182043 + CT-rich Low_complexity Low_complexity 2 73 0 1 1012 501 271 0 8 chr17 56090609 56090728 -39181923 - ID_B1 SINE B4 -4 220 103 1 1012 432 0 0 0 chr17 56091350 56091398 -39181253 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1012 380 275 20 25 chr17 56091460 56091578 -39181073 - PB1D7 SINE Alu 0 120 4 1 1012 220 98 38 38 chr17 56091909 56091962 -39180689 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 1 1012 244 121 0 0 chr17 56092866 56092899 -39179752 + ID_B1 SINE B4 175 207 -17 1 1012 262 182 0 29 chr17 56092901 56092969 -39179682 + GA-rich Low_complexity Low_complexity 3 68 0 1 1012 233 111 0 69 chr17 56092977 56093009 -39179642 + A-rich Low_complexity Low_complexity 1 28 0 1 1012 1234 54 0 0 chr17 56093009 56093156 -39179495 + B1_Mus1 SINE Alu 2 148 0 1 1012 233 111 0 69 chr17 56093156 56093181 -39179470 + A-rich Low_complexity Low_complexity 29 53 0 1 1012 191 243 157 0 chr17 56093181 56093251 -39179400 + MIRb SINE MIR 123 203 -65 1 1012 529 221 126 0 chr17 56094183 56094310 -39178341 + B1_Mur1 SINE Alu 1 143 -6 1 1012 206 169 22 22 chr17 56094943 56095034 -39177617 + (TGAA)n Simple_repeat Simple_repeat 2 92 0 1 1012 544 172 11 17 chr17 56095062 56095239 -39177412 + (TGAA)n Simple_repeat Simple_repeat 2 177 0 1 1012 381 313 6 16 chr17 56095285 56095467 -39177184 + (TGAA)n Simple_repeat Simple_repeat 1 180 0 1 1012 308 237 141 94 chr17 56095832 56095981 -39176670 - B4A SINE B4 -136 156 1 1 1012 913 121 7 35 chr17 56096467 56096612 -39176039 - B1_Mur4 SINE Alu -1 149 9 1 1012 284 278 21 43 chr17 56096660 56096754 -39175897 - B3A SINE B2 -3 195 104 1 1012 220 189 113 0 chr17 56096898 56096951 -39175700 - B4 SINE B4 -233 59 1 1 1012 935 115 13 39 chr17 56097416 56097570 -39175081 + B1_Mur4 SINE Alu 1 150 0 1 1012 444 272 0 19 chr17 56097611 56097733 -39174918 + B1F SINE Alu 1 120 0 1 1012 1137 89 0 0 chr17 56097738 56097884 -39174767 + B1_Mus1 SINE Alu 3 148 0 1 1012 357 287 0 0 chr17 56097988 56098075 -39174576 + B1F SINE Alu 51 137 -12 1 1012 349 173 39 26 chr17 56098088 56098165 -39174486 + ID4_ SINE ID 4 81 -2 1 1012 598 168 93 58 chr17 56098198 56098337 -39174314 + B1_Mur2 SINE Alu 5 148 -1 1 1013 238 214 0 111 chr17 56099165 56099228 -39173423 - PB1D9 SINE Alu -3 117 62 1 1013 389 235 37 0 chr17 56099339 56099420 -39173231 - PB1D10 SINE Alu -33 84 1 1 1013 305 295 160 15 chr17 56099754 56099885 -39172766 + MER68 LTR ERVL 166 315 -248 1 1013 1682 202 63 19 chr17 56100663 56101028 -39171623 - ORR1C2 LTR MaLR 0 379 1 1 1013 216 325 30 38 chr17 56101171 56101302 -39171349 - L2b LINE L2 -282 3093 2964 1 1013 519 261 47 113 chr17 56101772 56101984 -39170667 - ID_B1 SINE B4 -14 210 13 1 1013 203 148 56 0 chr17 56102070 56102124 -39170527 + (GTTTG)n Simple_repeat Simple_repeat 3 59 0 1 1013 203 161 0 51 chr17 56102152 56102195 -39170456 + A-rich Low_complexity Low_complexity 1 40 0 1 1013 755 35 266 0 chr17 56102195 56102308 -39170343 + B1_Mus1 SINE Alu 1 143 -5 1 1013 203 161 0 51 chr17 56102308 56102323 -39170328 + A-rich Low_complexity Low_complexity 41 55 0 1 1013 505 242 22 36 chr17 56102381 56102518 -39170133 - B3 SINE B2 -48 168 34 1 1013 220 191 111 56 chr17 56102540 56102612 -39170039 - PB1D7 SINE Alu -7 113 38 1 1013 818 246 100 63 chr17 56102889 56103196 -39169455 - RMER13A LTR ERVK -393 467 171 1 1013 285 296 0 65 chr17 56103707 56103877 -39168774 + C-rich Low_complexity Low_complexity 3 161 0 1 1013 765 222 32 65 chr17 56104242 56104459 -39168192 - ID_B1 SINE B4 -2 222 13 1 1013 338 323 113 113 chr17 56104842 56104863 -39167788 + B4A SINE B4 1 21 -271 2 1013 610 83 52 8 chr17 56104863 56104995 -39167656 + L1Md_F3 LINE L1 6452 6584 0 2 1013 338 323 113 113 chr17 56104993 56105163 -39167488 + B4A SINE B4 22 204 -88 2 1013 365 263 35 0 chr17 56105163 56105277 -39167374 + PB1D9 SINE Alu 2 119 -1 2 1013 338 323 113 113 chr17 56105277 56105463 -39167188 + B4A SINE B4 205 282 -10 2 1013 180 0 0 0 chr17 56105606 56105626 -39167025 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1013 501 135 0 53 chr17 56105631 56105725 -39166926 - B2_Mm2 SINE B2 0 195 107 2 1013 395 167 191 0 chr17 56106202 56106286 -39166365 + ID_B1 SINE B4 124 223 -1 2 1013 863 157 21 0 chr17 56106289 56106429 -39166222 + B1_Mur4 SINE Alu 1 143 -7 2 1013 196 357 56 28 chr17 56106618 56106762 -39165889 - MIR SINE MIR -52 210 63 2 1013 402 21 0 0 chr17 56109066 56109113 -39163538 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1013 584 152 317 0 chr17 56109518 56109663 -39162988 + ID_B1 SINE B4 17 207 -17 2 1013 237 207 12 24 chr17 56110705 56110789 -39161862 + CT-rich Low_complexity Low_complexity 1 83 0 2 1013 471 265 77 61 chr17 56111289 56111470 -39161181 - ID_B1 SINE B4 0 224 41 2 1013 698 187 55 49 chr17 56111477 56111640 -39161011 + URR1B DNA MER1_type 5 168 -57 2 1013 600 27 0 0 chr17 56111671 56111745 -39160906 + (GTTTG)n Simple_repeat Simple_repeat 5 78 0 2 1013 281 248 160 17 chr17 56111824 56111943 -39160708 + MIR SINE MIR 13 148 -114 2 1013 396 291 8 52 chr17 56111983 56112117 -39160534 + B4A SINE B4 44 171 -121 2 1013 257 215 14 58 chr17 56112978 56113047 -39159604 - RSINE1 SINE B4 -75 90 25 2 1013 204 40 0 0 chr17 56113484 56113509 -39159142 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 2 1013 1238 80 91 0 chr17 56114235 56114410 -39158241 + B2_Mm2 SINE B2 4 194 -1 2 1013 576 244 104 29 chr17 56114424 56114597 -39158054 + B3A SINE B2 3 188 -10 2 1013 962 97 7 0 chr17 56114603 56114747 -39157904 + B1_Mur4 SINE Alu 6 150 0 2 1013 189 121 0 0 chr17 56114759 56114792 -39157859 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 2 1013 725 216 6 69 chr17 56114794 56114968 -39157683 + RSINE1 SINE B4 3 165 0 2 1013 342 156 0 0 chr17 56114968 56115032 -39157619 + (CATA)n Simple_repeat Simple_repeat 1 64 0 2 1013 476 300 0 0 chr17 56115271 56115381 -39157270 - B1_Mur1 SINE Alu -12 137 28 2 1013 414 287 0 9 chr17 56115409 56115518 -39157133 - RSINE1 SINE B4 -31 134 27 2 1013 329 261 101 34 chr17 56115873 56115992 -39156659 + RSINE1 SINE B4 4 130 -35 2 1013 26 30 0 0 chr17 56116004 56116037 -39156614 + AT_rich Low_complexity Low_complexity 1 33 0 2 1013 682 118 0 29 chr17 56116486 56116591 -39156060 - RLTR23 LTR ERV1 0 430 329 2 1013 541 104 146 0 chr17 56116581 56116677 -39155974 - RLTR23 LTR ERV1 -320 110 1 2 1013 324 0 0 0 chr17 56116799 56116835 -39155816 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1013 315 275 77 0 chr17 56116859 56116950 -39155701 - B3A SINE B2 -100 98 1 2 1013 657 90 98 9 chr17 56116977 56117089 -39155562 + B1_Mur2 SINE Alu 26 147 -2 2 1013 1453 94 16 0 chr17 56117348 56117540 -39155111 + B2_Mm2 SINE B2 1 195 0 2 1013 235 190 0 49 chr17 56118537 56118598 -39154053 - ZP3AR Satellite Satellite -105 107 50 2 1013 1497 50 17 0 chr17 56118634 56118813 -39153838 + B2_Mm2 SINE B2 1 182 -13 2 1013 180 0 0 0 chr17 56118813 56118833 -39153818 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 1013 358 284 0 31 chr17 56119305 56119403 -39153248 - B1F SINE Alu -54 95 1 2 1013 238 170 0 0 chr17 56119421 56119468 -39153183 - B1F1 SINE Alu -94 55 9 2 1013 210 311 0 63 chr17 56119468 56119499 -39153152 - B4 SINE B4 -151 140 68 2 1013 231 202 128 53 chr17 56119556 56119572 -39153079 - B1F2 SINE Alu -6 143 127 2 1013 509 233 242 12 chr17 56119572 56119733 -39152918 - B3A SINE B2 0 198 1 2 1013 324 202 128 53 chr17 56119733 56119810 -39152841 - PB1D10 SINE Alu -23 126 41 2 1013 477 0 0 0 chr17 56119813 56119866 -39152785 + (TTTTG)n Simple_repeat Simple_repeat 2 54 0 2 1013 827 146 39 0 chr17 56119868 56119998 -39152653 - B1_Mur4 SINE Alu -12 138 4 2 1013 252 282 46 23 chr17 56119999 56120021 -39152630 - PB1D10 SINE Alu 0 117 92 2 1013 315 0 0 0 chr17 56120021 56120056 -39152595 + (TC)n Simple_repeat Simple_repeat 1 35 0 2 1013 252 282 46 23 chr17 56120056 56120120 -39152531 - PB1D10 SINE Alu -26 91 29 2 1013 230 295 9 95 chr17 56120700 56120805 -39151846 + B4A SINE B4 197 292 0 2 1013 272 274 27 14 chr17 56120830 56120904 -39151747 + RSINE1 SINE B4 20 94 -71 2 1013 2973 38 12 0 chr17 56121045 56121387 -39151264 + ORR1A1 LTR MaLR 1 346 0 2 1013 13852 48 35 5 chr17 56121387 56123128 -39149523 + ORR1A1-int LTR MaLR 1 1792 0 2 1013 3043 32 3 0 chr17 56123128 56123473 -39149178 + ORR1A1 LTR MaLR 1 346 0 2 1013 462 256 52 8 chr17 56123474 56123608 -39149043 + B1_Mur1 SINE Alu 10 149 0 2 1013 427 251 99 81 chr17 56124241 56124390 -39148261 + ID_B1 SINE B4 8 154 -70 2 1013 787 158 8 0 chr17 56124394 56124521 -39148130 + B3 SINE B2 3 130 -86 2 1013 263 318 132 33 chr17 56124521 56124576 -39148075 + ID_B1 SINE B4 3 202 -22 2 1013 233 222 0 73 chr17 56124525 56124593 -39148058 + B1F SINE Alu 74 136 -13 2 1013 508 139 30 7 chr17 56124730 56124849 -39147802 + B1_Mur3 SINE Alu 2 119 -1 2 1013 494 299 26 26 chr17 56125220 56125241 -39147410 + CYRA11_Mm Unknown Y-chromosome 153 173 -444 2 1013 1131 134 11 5 chr17 56125241 56125428 -39147223 - URR1B DNA MER1_type -2 223 36 2 1013 440 208 28 28 chr17 56126569 56126678 -39145973 + PB1D7 SINE Alu 10 118 -2 2 1013 1148 244 64 21 chr17 56126678 56126958 -39145693 + B4A SINE B4 1 292 0 2 1013 297 0 0 0 chr17 56126964 56126997 -39145654 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1013 661 245 7 0 chr17 56127375 56127514 -39145137 - B1_Mur3 SINE Alu -1 148 9 2 1013 382 268 10 10 chr17 56128316 56128414 -39144237 - RSINE1 SINE B4 -66 99 2 2 1013 538 283 126 16 chr17 56128502 56128685 -39143966 + ID_B1 SINE B4 19 221 -3 2 1013 1436 80 5 11 chr17 56128759 56128948 -39143703 - B2_Mm2 SINE B2 -6 189 2 2 1013 582 273 0 0 chr17 56129047 56129175 -39143476 + RSINE1 SINE B4 2 129 -36 2 1013 934 157 20 0 chr17 56129222 56129369 -39143282 + B1_Mur4 SINE Alu 1 150 0 2 1013 195 100 0 0 chr17 56129382 56129412 -39143239 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 2 1013 1578 47 16 0 chr17 56130923 56131113 -39141538 + B2_Mm1t SINE B2 1 193 0 2 1013 386 255 21 0 chr17 56131751 56131866 -39140785 - B4A SINE B4 -6 286 163 2 1013 595 265 143 0 chr17 56132442 56132631 -39140020 + ID_B1 SINE B4 8 223 -1 2 1013 389 153 151 14 chr17 56132639 56132740 -39139911 + PB1D9 SINE Alu 5 119 -1 2 1013 888 208 58 24 chr17 56132980 56133187 -39139464 + B3 SINE B2 1 214 -2 2 1013 342 0 0 0 chr17 56133590 56133628 -39139023 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1013 234 342 15 123 chr17 56133701 56133831 -39138820 - B4A SINE B4 -123 169 54 2 1013 468 299 33 104 chr17 56133798 56133832 -39138819 + B4 SINE B4 54 74 -218 2 1013 912 110 0 58 chr17 56133832 56133986 -39138665 + B1_Mus2 SINE Alu 2 146 -1 2 1013 461 227 168 32 chr17 56134061 56134216 -39138435 - B3 SINE B2 -3 213 38 2 1013 380 222 89 0 chr17 56134263 56134353 -39138298 - PB1D10 SINE Alu -1 116 19 2 1013 382 267 19 29 chr17 56136511 56136615 -39136036 - B1F SINE Alu 0 149 47 2 1013 1492 95 126 168 chr17 56137553 56137854 -39134797 + ORR1B1 LTR MaLR 23 324 -70 2 1013 1149 68 0 7 chr17 56137854 56138001 -39134650 + B1_Mm SINE Alu 2 147 0 2 1013 1492 95 126 168 chr17 56138001 56138017 -39134634 + ORR1B1 LTR MaLR 325 326 -68 2 1013 1509 50 0 16 chr17 56138017 56138201 -39134450 - B2_Mm2 SINE B2 -14 181 1 2 1013 1492 95 126 168 chr17 56138201 56138262 -39134389 + ORR1B1 LTR MaLR 327 386 -8 2 1013 648 190 232 17 chr17 56138278 56138455 -39134196 + B3 SINE B2 2 216 0 2 1013 317 207 0 0 chr17 56138711 56138769 -39133882 + PB1D9 SINE Alu 18 75 -45 2 1013 23 33 0 0 chr17 56138793 56138823 -39133828 + AT_rich Low_complexity Low_complexity 1 30 0 2 1013 830 137 21 7 chr17 56138934 56139074 -39133577 + B1_Mur4 SINE Alu 9 150 0 2 1013 437 184 30 149 chr17 56140666 56140800 -39131851 + PB1D7 SINE Alu 1 118 -2 2 1013 491 191 28 29 chr17 56140826 56140943 -39131708 + B3A SINE B2 47 160 -38 2 1013 315 0 0 0 chr17 56140943 56140978 -39131673 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1013 255 265 85 111 chr17 56140978 56141013 -39131638 + B2_Mm2 SINE B2 158 195 0 2 1013 403 320 84 75 chr17 56141106 56141319 -39131332 + MTE2b LTR MaLR 3 217 -162 2 1013 242 230 120 13 chr17 56141335 56141410 -39131241 + MTE2b LTR MaLR 289 371 -8 2 1013 1142 50 0 0 chr17 56141538 56141677 -39130974 + B1_Mus1 SINE Alu 5 143 -5 2 1013 1137 112 0 4 chr17 56141678 56141926 -39130725 + (GGA)n Simple_repeat Simple_repeat 1 246 0 2 1013 983 72 7 0 chr17 56141964 56142102 -39130549 - B2_Mm1t SINE B2 -6 187 49 2 1013 395 302 123 12 chr17 56142786 56142957 -39129694 - ID_B1 SINE B4 -34 190 1 2 1013 229 250 0 0 chr17 56143209 56143257 -39129394 + (CCCA)n Simple_repeat Simple_repeat 4 51 0 2 1013 699 120 0 0 chr17 56143266 56143374 -39129277 + (TCCA)n Simple_repeat Simple_repeat 3 110 0 2 1013 1604 205 209 40 chr17 56143397 56143866 -39128785 - RLTR20B2 LTR ERVK -15 548 1 2 1013 409 225 0 43 chr17 56143897 56144083 -39128568 + (TCCA)n Simple_repeat Simple_repeat 2 179 0 2 1013 475 287 0 25 chr17 56144203 56144321 -39128330 + PB1D7 SINE Alu 2 116 -4 2 1013 237 210 0 0 chr17 56144592 56144654 -39127997 + (CAGG)n Simple_repeat Simple_repeat 1 62 0 2 1013 213 39 0 0 chr17 56145264 56145290 -39127361 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1013 288 0 0 0 chr17 56145367 56145399 -39127252 + (GGGA)n Simple_repeat Simple_repeat 4 35 0 2 1013 407 241 118 21 chr17 56145676 56145820 -39126831 - ID_B1 SINE B4 0 224 67 3 1013 1172 93 81 0 chr17 56145820 56145846 -39126805 - B2_Mm2 SINE B2 -8 187 161 3 1013 225 0 0 0 chr17 56145846 56145871 -39126780 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1013 1172 93 81 0 chr17 56145871 56146016 -39126635 - B2_Mm2 SINE B2 -35 160 4 3 1013 282 233 118 64 chr17 56146034 56146070 -39126581 - PB1D10 SINE Alu 0 117 74 3 1013 1119 68 151 24 chr17 56146070 56146236 -39126415 - B2_Mm2 SINE B2 -8 187 1 3 1013 282 233 118 64 chr17 56146236 56146309 -39126342 - PB1D10 SINE Alu -44 73 2 3 1013 239 258 85 11 chr17 56146439 56146533 -39126118 - ZP3AR Satellite Satellite -77 135 35 3 1013 898 121 45 0 chr17 56146792 56146924 -39125727 - B1_Mus1 SINE Alu -9 139 2 3 1013 1626 36 0 20 chr17 56147487 56147683 -39124968 + B2_Mm1a SINE B2 2 193 0 3 1013 182 292 198 0 chr17 56149114 56149210 -39123441 + MIRb SINE MIR 74 188 -80 3 1013 535 190 8 33 chr17 56149283 56149403 -39123248 - ZP3AR Satellite Satellite -84 128 12 3 1013 333 308 9 9 chr17 56149403 56149508 -39123143 - PB1D10 SINE Alu -9 108 4 3 1013 226 309 193 0 chr17 56149979 56150160 -39122491 - L2 LINE L2 -372 3047 2832 3 1013 594 79 0 0 chr17 56150627 56150716 -39121935 + (TC)n Simple_repeat Simple_repeat 2 90 0 3 1013 382 198 139 0 chr17 56150716 56150802 -39121849 - PB1D9 SINE Alu -12 108 11 3 1013 483 232 71 0 chr17 56150828 56150927 -39121724 - RSINE1 SINE B4 -59 106 1 3 1013 212 175 0 24 chr17 56150997 56151038 -39121613 + CT-rich Low_complexity Low_complexity 2 41 0 3 1013 685 167 12 106 chr17 56152110 56152271 -39120380 - B1_Mur4 SINE Alu -1 149 4 3 1013 1217 128 0 71 chr17 56152331 56152346 -39120305 - B2_Mm2 SINE B2 0 195 181 3 1013 1144 75 14 0 chr17 56152346 56152492 -39120159 - B1_Mus1 SINE Alu 0 148 1 3 1013 1217 128 0 71 chr17 56152492 56152686 -39119965 - B2_Mm2 SINE B2 -15 180 2 3 1013 733 187 40 0 chr17 56152707 56152857 -39119794 - B3 SINE B2 -4 212 57 3 1013 722 214 0 0 chr17 56152876 56153007 -39119644 - B1_Mus2 SINE Alu -7 140 10 3 1013 643 219 148 32 chr17 56153008 56153197 -39119454 - B3 SINE B2 -2 214 4 3 1013 1241 100 83 6 chr17 56153221 56153402 -39119249 - B2_Mm2 SINE B2 0 195 1 3 1013 957 67 8 0 chr17 56153406 56153540 -39119111 - B1_Mus2 SINE Alu 0 147 13 3 1013 231 286 83 0 chr17 56153445 56153578 -39119073 - ORR1B1-int LTR MaLR -755 754 611 3 1013 1623 42 5 0 chr17 56154026 56154218 -39118433 - B2_Mm1t SINE B2 0 193 1 3 1013 276 265 137 0 chr17 56155025 56155127 -39117524 - PB1D10 SINE Alu -1 116 1 3 1013 24 32 0 0 chr17 56156185 56156216 -39116435 + AT_rich Low_complexity Low_complexity 1 31 0 3 1013 439 231 19 37 chr17 56164856 56164964 -39107687 + ID_B1 SINE B4 86 191 -33 3 1013 335 283 16 81 chr17 56164964 56164979 -39107672 + PB1D7 SINE Alu 5 119 -1 3 1013 1555 52 21 0 chr17 56164982 56165173 -39107478 + B2_Mm2 SINE B2 1 195 0 3 1013 228 170 0 0 chr17 56165173 56165226 -39107425 + GA-rich Low_complexity Low_complexity 4 56 0 3 1013 414 0 0 0 chr17 56165372 56165418 -39107233 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 3 1013 282 255 4 24 chr17 56167274 56167358 -39105293 - B1F2 SINE Alu -37 83 1 3 1013 380 201 59 11 chr17 56168630 56168737 -39103914 - ZP3AR Satellite Satellite -45 112 1 3 1013 275 283 74 19 chr17 56168778 56168886 -39103765 + PB1D10 SINE Alu 2 115 -2 3 1013 1227 48 7 0 chr17 56169479 56169625 -39103026 + B1_Mus2 SINE Alu 1 147 0 3 1013 300 293 19 57 chr17 56170765 56170870 -39101781 + PB1D7 SINE Alu 19 119 -1 3 1013 291 277 302 0 chr17 56170899 56171101 -39101550 + B4 SINE B4 1 263 -29 3 1013 1163 43 14 0 chr17 56171128 56171267 -39101384 + B1_Mus2 SINE Alu 1 141 -6 3 1013 306 0 0 0 chr17 56171269 56171303 -39101348 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 3 1013 501 32 0 0 chr17 56172064 56172127 -39100524 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 1013 234 268 511 8 chr17 56172712 56172857 -39099794 - ID_B1 SINE B4 0 224 7 3 1013 368 304 44 9 chr17 56172886 56172999 -39099652 - PB1D10 SINE Alu 0 117 1 3 1013 235 217 145 0 chr17 56173877 56173946 -39098705 - B1_Mur4 SINE Alu -3 147 69 3 1013 292 190 17 0 chr17 56173951 56174009 -39098642 - ID SINE ID -161 63 5 3 1013 267 302 50 8 chr17 56174151 56174271 -39098380 - 7SK RNA RNA -203 128 4 3 1013 239 238 83 73 chr17 56174236 56174345 -39098306 - ID_B1 SINE B4 -17 207 98 3 1013 244 239 30 0 chr17 56174384 56174451 -39098200 + ID4 SINE ID 4 72 -11 3 1013 318 237 50 5 chr17 56174586 56174710 -39097941 + B1F2 SINE Alu 6 128 -19 3 1013 230 246 0 92 chr17 56174717 56174793 -39097858 + PB1 SINE Alu 46 114 -13 3 1013 342 229 84 0 chr17 56174787 56174870 -39097781 + PB1D10 SINE Alu 22 111 -6 3 1013 459 185 17 85 chr17 56175246 56175364 -39097287 - PB1D9 SINE Alu 0 120 11 3 1013 335 273 36 9 chr17 56175564 56175675 -39096976 - RSINE1 SINE B4 -49 116 3 3 1013 24 0 0 0 chr17 56176320 56176344 -39096307 + AT_rich Low_complexity Low_complexity 1 24 0 3 1013 482 264 44 82 chr17 56176420 56176626 -39096025 + B3A SINE B2 1 198 0 3 1013 488 280 15 8 chr17 56176794 56176927 -39095724 - ID_B1 SINE B4 -5 219 86 3 1013 2533 80 3 33 chr17 56177107 56177371 -39095280 + ORR1A2 LTR MaLR 1 259 -68 3 1013 1409 79 16 0 chr17 56177371 56177560 -39095091 - B2_Mm1t SINE B2 -1 192 1 3 1013 2533 80 3 33 chr17 56177560 56177632 -39095019 + ORR1A2 LTR MaLR 260 327 0 3 1013 277 216 19 102 chr17 56177722 56177830 -39094821 + MT2B LTR ERVL 167 265 -336 3 1013 371 316 26 0 chr17 56178250 56178367 -39094284 - ID_B1 SINE B4 -2 222 103 3 1013 293 139 17 68 chr17 56178652 56178718 -39093933 + B1F1 SINE Alu 88 150 0 3 1013 928 56 0 8 chr17 56178752 56178878 -39093773 - B1_Mus2 SINE Alu -2 145 21 3 1013 554 231 1 38 chr17 56178891 56179022 -39093629 - B1_Mur2 SINE Alu -21 127 1 3 1013 245 278 76 89 chr17 56179022 56179063 -39093588 - MT2B2 LTR ERVL -426 158 120 3 1013 1208 50 0 0 chr17 56179211 56179352 -39093299 + B1_Mus1 SINE Alu 3 143 -5 3 1013 375 23 0 0 chr17 56179886 56179930 -39092721 + (CCG)n Simple_repeat Simple_repeat 3 46 0 3 1013 432 0 0 0 chr17 56180797 56180845 -39091806 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1013 285 321 48 0 chr17 56181014 56181098 -39091553 + PB1D7 SINE Alu 1 88 -32 3 1013 759 146 71 28 chr17 56181464 56181605 -39091046 + B1_Mur2 SINE Alu 3 149 0 3 1013 272 344 21 0 chr17 56181785 56181878 -39090773 - ID_B1 SINE B4 -125 99 5 3 1013 431 247 175 29 chr17 56181991 56182162 -39090489 - B3A SINE B2 0 198 3 3 1013 404 214 28 55 chr17 56182176 56182285 -39090366 - RSINE1 SINE B4 -57 108 3 3 1013 410 252 39 39 chr17 56182403 56182531 -39090120 - MER20 DNA MER1_type -19 200 73 3 1013 384 312 13 80 chr17 56182564 56182714 -39089937 + RSINE1 SINE B4 24 163 -2 3 1013 1423 81 32 0 chr17 56182730 56182916 -39089735 + B2_Mm2 SINE B2 1 192 -3 3 1013 583 224 32 8 chr17 56182932 56183091 -39089560 + B3A SINE B2 7 176 -19 3 1013 431 270 25 34 chr17 56183102 56183221 -39089430 + PB1D9 SINE Alu 2 119 -1 3 1013 381 286 26 26 chr17 56183248 56183363 -39089288 + PB1D7 SINE Alu 1 115 -5 3 1013 231 299 113 0 chr17 56183686 56183783 -39088868 - BC1_Mm scRNA scRNA -30 122 15 3 1013 183 42 0 0 chr17 56183978 56184002 -39088649 + (GAAA)n Simple_repeat Simple_repeat 2 25 0 3 1013 427 225 22 0 chr17 56184018 56184107 -39088544 - PB1D9 SINE Alu -23 97 7 3 1013 303 307 0 27 chr17 56184107 56184133 -39088518 - ID_B1 SINE B4 -47 175 67 3 1013 204 40 0 0 chr17 56184160 56184185 -39088466 + (TGG)n Simple_repeat Simple_repeat 1 25 0 3 1013 487 204 31 0 chr17 56184185 56184283 -39088368 - B1_Mur4 SINE Alu -7 143 43 3 1013 435 254 77 38 chr17 56184303 56184496 -39088155 - B3A SINE B2 -1 194 1 3 1013 632 257 70 0 chr17 56184550 56184721 -39087930 - B3A SINE B2 -11 187 5 3 1013 1425 89 230 0 chr17 56185053 56185310 -39087341 - ORR1A2 LTR MaLR -11 316 1 3 1013 327 195 182 0 chr17 56185315 56185392 -39087259 - RSINE1 SINE B4 -73 92 2 3 1013 1187 210 0 14 chr17 56185898 56186111 -39086540 - B3 SINE B2 -6 210 1 3 1013 481 226 9 28 chr17 56187220 56187329 -39085322 + ID_B1 SINE B4 118 224 0 3 1013 393 162 0 51 chr17 56187337 56187415 -39085236 + PB1D10 SINE Alu 24 97 -20 3 1013 328 193 70 0 chr17 56187437 56187494 -39085157 + ID4_ SINE ID 5 65 -18 3 1013 203 220 20 0 chr17 56187770 56187820 -39084831 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 3 1013 1278 34 0 0 chr17 56187999 56188146 -39084505 - B1_Mus1 SINE Alu 0 148 2 3 1013 590 268 109 45 chr17 56188177 56188293 -39084358 - Lx9 LINE L1 -311 7333 7206 3 1013 966 182 47 0 chr17 56188293 56188463 -39084188 - B2_Mm2 SINE B2 -16 179 2 3 1013 590 268 109 45 chr17 56188463 56188612 -39084039 - Lx9 LINE L1 -439 7205 7051 3 1013 625 332 104 0 chr17 56188785 56189065 -39083586 - Lx8 LINE L1 -131 7342 7034 3 1013 302 253 10 78 chr17 56189221 56189324 -39083327 + B3 SINE B2 1 96 -99 3 1013 1140 75 0 20 chr17 56189456 56189605 -39083046 - B1_Mus1 SINE Alu 0 148 3 3 1013 260 321 45 0 chr17 56189774 56189886 -39082765 - Lx7 LINE L1 -1797 5899 5783 4 1013 317 224 29 0 chr17 56189906 56189982 -39082669 - L1Md_F3 LINE L1 -57 5826 5749 4 1013 203 153 40 53 chr17 56190153 56190229 -39082422 + (TTTG)n Simple_repeat Simple_repeat 2 76 0 4 1013 849 162 10 46 chr17 56190230 56190244 -39082407 - B2_Mm2 SINE B2 0 195 182 4 1013 1059 88 0 57 chr17 56190244 56190401 -39082250 - B1_Mus1 SINE Alu 0 148 1 4 1013 849 162 10 46 chr17 56190401 56190580 -39082071 - B2_Mm2 SINE B2 -14 181 10 4 1013 259 281 47 0 chr17 56190678 56190742 -39081909 - RSINE1 SINE B4 -98 67 1 4 1013 387 260 20 10 chr17 56191124 56191225 -39081426 + PB1D10 SINE Alu 15 116 -1 4 1013 227 336 75 0 chr17 56191205 56191312 -39081339 + MER2 DNA MER2_type 33 147 -198 4 1013 274 194 53 40 chr17 56191428 56191503 -39081148 + ID_B1 SINE B4 32 107 -117 4 1013 211 229 46 62 chr17 56191505 56191530 -39081121 + PB1D10 SINE Alu 51 112 -3 4 1013 226 158 0 0 chr17 56191530 56191568 -39081083 + ID_B1 SINE B4 182 219 -5 4 1013 1210 74 0 0 chr17 56191683 56191831 -39080820 - B1_Mus1 SINE Alu 0 148 1 4 1013 306 0 0 0 chr17 56192012 56192046 -39080605 + (GTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1013 1055 71 14 0 chr17 56192046 56192181 -39080470 - B1_Mus1 SINE Alu -8 140 4 4 1013 1371 65 43 0 chr17 56192185 56192370 -39080281 - B2_Mm1a SINE B2 0 193 1 4 1013 198 0 0 0 chr17 56192451 56192473 -39080178 + (T)n Simple_repeat Simple_repeat 1 22 0 4 1013 1154 82 0 0 chr17 56192475 56192621 -39080030 - B1_Mus2 SINE Alu 0 147 2 4 1013 217 204 40 20 chr17 56192637 56192687 -39079964 - PB1D9 SINE Alu -14 106 56 4 1013 223 242 48 0 chr17 56193132 56193194 -39079457 + ID4_ SINE ID 17 81 -2 4 1013 331 215 19 114 chr17 56193531 56193636 -39079015 - ZP3AR Satellite Satellite -115 97 3 4 1013 533 162 205 9 chr17 56193750 56193862 -39078789 - B1_Mur1 SINE Alu -15 134 1 4 1013 4773 170 41 72 chr17 56193956 56194717 -39077934 - RMER12 LTR ERVK -106 1216 386 4 1013 180 0 0 0 chr17 56194717 56194737 -39077914 + (CTATT)n Simple_repeat Simple_repeat 3 22 0 4 1013 4773 132 42 54 chr17 56194737 56194765 -39077886 - RMER12 LTR ERVK -937 385 385 4 1013 1241 54 0 0 chr17 56194765 56194912 -39077739 - B1_Mus2 SINE Alu 0 147 1 4 1013 1407 88 5 10 chr17 56194915 56195111 -39077540 - B2_Mm2 SINE B2 0 195 1 4 1013 4773 132 42 54 chr17 56195111 56195481 -39077170 - RMER12 LTR ERVK -937 385 2 4 1013 252 0 0 0 chr17 56195505 56195533 -39077118 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1013 315 314 68 25 chr17 56195533 56195696 -39076955 - B4 SINE B4 -92 200 31 4 1013 287 146 127 0 chr17 56196050 56196105 -39076546 + PB1D9 SINE Alu 47 108 -12 4 1013 199 0 31 31 chr17 56196126 56196158 -39076493 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 4 1013 652 184 52 0 chr17 56196169 56196305 -39076346 - B1_Mus1 SINE Alu 0 148 6 4 1013 223 169 0 78 chr17 56197211 56197288 -39075363 + GA-rich Low_complexity Low_complexity 4 74 0 4 1013 751 174 98 0 chr17 56197701 56197833 -39074818 - B1_Mus2 SINE Alu -1 146 2 4 1013 207 0 0 0 chr17 56197835 56197858 -39074793 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4 1013 383 319 80 12 chr17 56197913 56198075 -39074576 - ID_B1 SINE B4 -44 180 8 4 1013 355 217 130 0 chr17 56198104 56198196 -39074455 + PB1D9 SINE Alu 12 115 -5 4 1013 204 351 0 0 chr17 56198415 56198489 -39074162 + GA-rich Low_complexity Low_complexity 1 74 0 4 1013 226 281 200 36 chr17 56198816 56198956 -39073695 - B4 SINE B4 -60 232 70 4 1013 259 239 127 0 chr17 56200006 56200077 -39072574 - B3A SINE B2 -102 96 17 4 1013 457 275 58 0 chr17 56200107 56200227 -39072424 - RSINE1 SINE B4 -31 134 8 4 1013 372 106 2 36 chr17 56201083 56201148 -39071503 - B3 SINE B2 -130 63 1 4 1013 292 220 133 0 chr17 56201225 56201313 -39071338 + B1F SINE Alu 15 110 -7 4 1013 214 200 111 28 chr17 56203843 56203915 -39068736 - ID4 SINE ID -3 80 3 4 1013 296 369 0 26 chr17 56203948 56204101 -39068550 - B1F SINE Alu 0 149 1 4 1013 255 370 18 9 chr17 56204920 56205029 -39067622 - RSINE1 SINE B4 -41 124 15 4 1013 1442 43 0 0 chr17 56205259 56205446 -39067205 - B2_Mm1t SINE B2 0 193 7 4 1013 670 261 16 11 chr17 56205840 56206022 -39066629 - B3A SINE B2 0 198 16 4 1013 1387 87 21 5 chr17 56206273 56206459 -39066192 + B2_Mm2 SINE B2 5 193 -2 4 1013 749 85 246 8 chr17 56206459 56206576 -39066075 + B1_Mm SINE Alu 1 146 -1 4 1013 307 219 108 78 chr17 56209529 56209658 -39062993 + RSINE1 SINE B4 1 133 -32 4 1013 261 277 34 59 chr17 56209710 56209829 -39062822 + PB1D7 SINE Alu 5 120 0 4 1013 1132 49 28 7 chr17 56209853 56209997 -39062654 + B1_Mus2 SINE Alu 1 147 0 4 1013 238 295 51 0 chr17 56210910 56210988 -39061663 + MLT1D LTR MaLR 269 350 -155 4 1013 1280 174 175 108 chr17 56211271 56211361 -39061290 + ORR1C2 LTR MaLR 1 90 -294 4 1013 1249 41 0 0 chr17 56211361 56211506 -39061145 + B1_Mus1 SINE Alu 3 147 -1 4 1013 1280 174 175 108 chr17 56211506 56211775 -39060876 + ORR1C2 LTR MaLR 91 384 0 4 1013 1979 148 122 12 chr17 56212729 56213297 -39059354 + RMER6C LTR ERVK 84 719 -1 4 1013 243 224 41 0 chr17 56214787 56214836 -39057815 + ID SINE ID 19 69 -155 4 1013 964 98 85 0 chr17 56215425 56215578 -39057073 + B2_Mm2 SINE B2 2 167 -28 4 1013 402 21 0 0 chr17 56215589 56215636 -39057015 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 4 1013 1113 95 0 18 chr17 56215636 56215796 -39056855 - B2_Mm2 SINE B2 -37 158 1 4 1013 180 0 0 0 chr17 56215807 56215827 -39056824 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 1013 1163 30 0 0 chr17 56215831 56215963 -39056688 - B1_Mm SINE Alu -12 135 4 4 1013 1393 70 21 16 chr17 56216025 56216214 -39056437 + B2_Mm1a SINE B2 2 191 -2 4 1013 406 141 209 12 chr17 56216260 56216346 -39056305 + B1_Mus1 SINE Alu 1 103 -45 4 1013 485 58 0 14 chr17 56216353 56216423 -39056228 + (GAAA)n Simple_repeat Simple_repeat 4 72 0 4 1013 487 229 2 15 chr17 56216450 56216580 -39056071 - B1_Mur1 SINE Alu -1 148 10 4 1013 314 263 20 113 chr17 56216633 56216783 -39055868 - B1F SINE Alu -1 148 13 4 1013 1359 87 26 26 chr17 56216981 56217171 -39055480 + B2_Mm1t SINE B2 4 193 0 4 1013 197 231 0 0 chr17 56217216 56217255 -39055396 - MIR SINE MIR -109 153 115 4 1013 349 274 226 16 chr17 56217349 56217530 -39055121 + ID_B1 SINE B4 6 224 0 4 1013 285 309 29 49 chr17 56217600 56217702 -39054949 + RSINE1 SINE B4 66 165 0 4 1013 212 0 0 35 chr17 56217711 56217740 -39054911 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 4 1013 1158 51 0 0 chr17 56217740 56217877 -39054774 - B1_Mus1 SINE Alu -10 138 2 4 1013 568 225 7 84 chr17 56217895 56218050 -39054601 + B1_Mur1 SINE Alu 2 144 -5 4 1013 1235 41 0 0 chr17 56218070 56218215 -39054436 + B1_Mus1 SINE Alu 2 146 -2 4 1013 210 37 0 0 chr17 56219309 56219336 -39053315 + (CGGG)n Simple_repeat Simple_repeat 4 30 0 4 1013 429 176 156 74 chr17 56221173 56221308 -39051343 + B1_Mur2 SINE Alu 1 146 -3 4 1013 404 256 86 23 chr17 56222317 56222445 -39050206 + RSINE1 SINE B4 2 137 -28 4 1013 406 300 37 7 chr17 56222651 56222825 -39049826 - B4A SINE B4 -2 290 102 4 1013 1567 16 27 5 chr17 56223043 56223231 -39049420 - B2_Mm1a SINE B2 0 193 2 4 1013 358 216 0 102 chr17 56223980 56224088 -39048563 + PB1D10 SINE Alu 21 117 0 4 1013 1706 133 27 45 chr17 56224258 56224588 -39048063 + RMER4A LTR ERVK 143 466 0 4 1013 723 180 72 0 chr17 56224757 56224896 -39047755 - B3 SINE B2 0 216 68 4 1013 1168 68 0 26 chr17 56224975 56225126 -39047525 + B1_Mus2 SINE Alu 1 147 0 4 1013 198 0 0 0 chr17 56225588 56225610 -39047041 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 1013 1092 66 15 0 chr17 56225610 56225746 -39046905 - B1_Mm SINE Alu -9 138 1 4 1013 403 322 44 38 chr17 56225773 56225931 -39046720 - B4A SINE B4 0 292 134 4 1013 595 227 30 23 chr17 56226040 56226171 -39046480 - ID_B1 SINE B4 -2 222 91 4 1013 569 228 63 0 chr17 56226419 56226546 -39046105 - RSINE1 SINE B4 -14 151 17 4 1013 231 319 52 21 chr17 56226598 56226694 -39045957 - PB1D7 SINE Alu -5 115 17 4 1013 263 297 130 41 chr17 56226757 56226880 -39045771 + ID_B1 SINE B4 5 138 -86 4 1013 530 211 36 9 chr17 56227035 56227145 -39045506 - RSINE1 SINE B4 -37 128 16 4 1013 1269 47 0 0 chr17 56227281 56227429 -39045222 - B1_Mus1 SINE Alu 0 148 1 4 1013 1854 109 92 6 chr17 56227681 56227995 -39044656 - MTC LTR MaLR -25 396 56 4 1013 441 298 26 0 chr17 56228096 56228210 -39044441 - PB1D10 SINE Alu 0 117 1 4 1013 227 272 31 52 chr17 56228331 56228428 -39044223 - PB1D7 SINE Alu -6 114 20 4 1013 410 256 81 35 chr17 56228361 56228510 -39044141 - B4A SINE B4 -116 176 23 4 1013 501 273 0 18 chr17 56229125 56229237 -39043414 - ID_B1 SINE B4 -4 220 111 4 1013 1718 177 134 52 chr17 56229482 56229668 -39042983 + MTD LTR MaLR 1 210 -209 4 1013 1582 37 16 0 chr17 56229668 56229857 -39042794 + B2_Mm1t SINE B2 2 193 0 4 126 1718 177 134 52 chr17 56229857 56230057 -39042594 + MTD LTR MaLR 211 419 0 4 1014 3136 217 147 31 chr17 56230059 56231026 -39041625 + MTD-int LTR MaLR 5 1083 -175 4 1014 1276 34 0 0 chr17 56231041 56231188 -39041463 - B1_Mm SINE Alu 0 147 1 4 1014 1706 26 0 0 chr17 56231220 56231412 -39041239 - B2_Mm1a SINE B2 0 193 2 5 1014 614 28 0 0 chr17 56231423 56231495 -39041156 - tRNA-Glu-GAG_ tRNA tRNA -3 72 1 5 1014 219 120 39 39 chr17 56231552 56231604 -39041047 + (TTGG)n Simple_repeat Simple_repeat 2 53 0 5 1014 300 71 0 0 chr17 56231621 56231663 -39040988 - B1_Mm SINE Alu -8 139 98 5 1014 229 186 0 33 chr17 56231674 56231735 -39040916 + T-rich Low_complexity Low_complexity 2 60 0 5 1014 837 82 0 0 chr17 56231749 56231871 -39040780 + L1_Mus3 LINE L1 6410 6531 -107 5 1014 297 0 0 0 chr17 56231895 56231928 -39040723 + (T)n Simple_repeat Simple_repeat 1 33 0 5 1014 258 213 50 62 chr17 56232448 56232528 -39040123 + B1F1 SINE Alu 70 148 -1 5 1014 381 211 0 27 chr17 56232530 56232603 -39040048 + ID4_ SINE ID 2 72 -11 5 1014 191 349 115 26 chr17 56232623 56232779 -39039872 - MIR SINE MIR 0 262 93 5 1014 493 261 0 42 chr17 56233218 56233338 -39039313 - PB1D10 SINE Alu -2 115 1 5 1014 1439 80 11 0 chr17 56233364 56233552 -39039099 + B2_Mm1a SINE B2 1 190 -3 5 1014 682 222 65 43 chr17 56233650 56233834 -39038817 - B4A SINE B4 -2 290 103 5 1014 582 241 20 162 chr17 56233873 56233998 -39038653 - B3 SINE B2 -4 212 105 5 1014 781 147 41 20 chr17 56233998 56234144 -39038507 - B1_Mur2 SINE Alu 0 149 1 5 1014 582 241 20 162 chr17 56234144 56234223 -39038428 - B3 SINE B2 -112 104 40 5 1014 1453 43 60 5 chr17 56234223 56234408 -39038243 - B2_Mm2 SINE B2 0 195 1 5 1014 582 241 20 162 chr17 56234408 56234449 -39038202 - B3 SINE B2 -177 39 1 5 1014 362 316 59 55 chr17 56234463 56234655 -39037996 - B3A SINE B2 -20 196 6 5 1014 1507 58 21 5 chr17 56234726 56234746 -39037905 - B2_Mm1t SINE B2 0 193 170 5 1014 318 26 0 0 chr17 56234746 56234785 -39037866 + (TATG)n Simple_repeat Simple_repeat 2 40 0 5 1014 1507 58 21 5 chr17 56234785 56234954 -39037697 - B2_Mm1t SINE B2 -24 169 1 5 1014 261 303 0 15 chr17 56237004 56237071 -39035580 - L2b LINE L2 -20 3355 3290 5 1014 1627 41 0 5 chr17 56239026 56239220 -39033431 - B2_Mm1a SINE B2 0 193 1 5 1014 265 216 130 39 chr17 56247003 56247080 -39025571 + B1F SINE Alu 24 107 -42 5 1014 600 228 8 0 chr17 56247509 56247636 -39025015 + ID_B1 SINE B4 96 223 -1 5 1014 204 234 126 61 chr17 56247809 56247991 -39024660 - MIRc SINE MIR -41 235 35 5 1014 247 255 0 18 chr17 56249755 56249811 -39022840 + L2a LINE L2 3365 3419 -7 5 1014 324 94 0 0 chr17 56250011 56250064 -39022587 + (TC)n Simple_repeat Simple_repeat 2 54 0 5 1014 270 0 0 0 chr17 56251174 56251204 -39021447 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 1014 276 219 26 40 chr17 56251204 56251269 -39021382 - PB1D10 SINE Alu -10 107 42 5 1014 240 182 0 0 chr17 56252760 56252804 -39019847 - B1F1 SINE Alu -101 48 5 5 1014 656 208 202 0 chr17 56253671 56253854 -39018797 - ID_B1 SINE B4 -4 220 1 5 1014 288 341 12 0 chr17 56253937 56254022 -39018629 + RSINE1 SINE B4 79 164 -1 5 1014 191 158 105 0 chr17 56254086 56254124 -39018527 - MIRb SINE MIR -187 81 40 5 1014 651 225 0 0 chr17 56254152 56254272 -39018379 + PB1D7 SINE Alu 1 120 0 5 1014 232 216 38 170 chr17 56254407 56254513 -39018138 + MIRc SINE MIR 37 128 -140 5 1014 422 216 114 29 chr17 56255425 56255453 -39017198 + ID_B1 SINE B4 56 152 -140 5 1014 536 188 59 0 chr17 56255453 56255554 -39017097 + PB1D7 SINE Alu 7 113 -7 5 1014 422 216 114 29 chr17 56255554 56255573 -39017078 + ID_B1 SINE B4 153 227 -65 5 1014 401 76 15 0 chr17 56257174 56257240 -39015411 + (TTGG)n Simple_repeat Simple_repeat 2 68 0 5 1014 659 42 0 77 chr17 56257240 56257333 -39015318 - B1_Mus2 SINE Alu -7 140 52 5 1014 231 208 59 94 chr17 56257276 56257361 -39015290 - RLTR25B LTR ERVK -519 509 428 5 1014 569 91 23 0 chr17 56257361 56257449 -39015202 + (TTCTCC)n Simple_repeat Simple_repeat 3 92 0 5 1014 228 35 0 0 chr17 56257460 56257489 -39015162 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1014 924 96 73 7 chr17 56257489 56257616 -39015035 - B1_Mm SINE Alu -9 138 3 5 1014 350 239 0 11 chr17 56257643 56257732 -39014919 - B1F SINE Alu -1 148 61 5 1014 446 240 156 10 chr17 56257700 56257867 -39014784 - ID_B1 SINE B4 -25 199 9 5 1014 477 298 99 30 chr17 56257877 56258078 -39014573 - B3 SINE B2 -1 215 1 5 1014 204 223 86 44 chr17 56258079 56258201 -39014450 - MIRm SINE MIR -64 204 85 5 1014 490 244 32 0 chr17 56258232 56258355 -39014296 + ID_B1 SINE B4 97 223 -1 5 1014 304 297 25 67 chr17 56258394 56258414 -39014237 + MT2B LTR ERVL 144 158 -443 5 1014 623 186 25 0 chr17 56258414 56258532 -39014119 + B1_Mus2 SINE Alu 1 121 -26 5 1014 374 258 144 108 chr17 56258538 56258729 -39013922 + B4A SINE B4 1 198 -94 5 1014 1225 55 0 0 chr17 56258729 56258875 -39013776 - B1_Mus1 SINE Alu -1 147 2 5 1014 374 258 144 108 chr17 56258875 56258905 -39013746 + B4A SINE B4 199 229 -63 5 1014 624 271 0 7 chr17 56258905 56259057 -39013594 + RSINE1 SINE B4 3 153 -12 5 1014 249 300 7 108 chr17 56261872 56261991 -39010660 + PB1D9 SINE Alu 9 120 0 5 1014 936 270 68 50 chr17 56262049 56262330 -39010321 - B4A SINE B4 0 292 7 5 1014 192 152 0 0 chr17 56262925 56262958 -39009693 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 1014 303 232 43 0 chr17 56264429 56264498 -39008153 - ZP3AR Satellite Satellite -127 85 14 5 1014 252 0 0 0 chr17 56264518 56264546 -39008105 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1014 1150 72 0 0 chr17 56265151 56265290 -39007361 + B1_Mus1 SINE Alu 2 140 -8 5 1014 363 44 0 0 chr17 56265327 56265372 -39007279 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 5 1014 255 247 62 0 chr17 56265454 56265535 -39007116 + L2b LINE L2 2978 3063 -312 5 1014 1344 114 2 9 chr17 56268056 56268488 -39004163 + (TGGA)n Simple_repeat Simple_repeat 1 428 0 5 1014 938 157 14 0 chr17 56269580 56269727 -39002924 + B1_Mur3 SINE Alu 1 149 0 5 1014 237 108 0 0 chr17 56269754 56269791 -39002860 + (CAA)n Simple_repeat Simple_repeat 3 39 0 5 1014 343 264 23 0 chr17 56270302 56270389 -39002262 + MIRb SINE MIR 63 151 -117 5 1014 186 103 0 0 chr17 56271117 56271146 -39001505 + (CCCCCA)n Simple_repeat Simple_repeat 1 29 0 5 1014 708 153 8 8 chr17 56271634 56271753 -39000898 + PB1D9 SINE Alu 1 119 -1 5 1014 543 219 26 0 chr17 56272622 56272736 -38999915 + PB1D10 SINE Alu 1 117 0 5 1014 505 234 30 103 chr17 56273455 56273744 -38998907 - ZP3AR Satellite Satellite -90 267 1 5 1014 256 246 130 0 chr17 56273798 56273867 -38998784 - PB1D9 SINE Alu -5 122 45 5 1014 192 235 0 38 chr17 56274455 56274508 -38998143 + L2b LINE L2 3325 3375 0 5 1014 248 282 68 27 chr17 56274928 56275001 -38997650 - MER20 DNA MER1_type -142 77 2 5 1014 207 333 19 57 chr17 56275962 56276067 -38996584 - MIRm SINE MIR -139 137 37 5 1014 192 182 0 0 chr17 56276418 56276451 -38996200 - L2b LINE L2 -11 3364 3332 5 1014 215 204 40 20 chr17 56276459 56276509 -38996142 - L2b LINE L2 -19 3356 3306 5 1014 242 294 46 23 chr17 56276942 56277029 -38995622 - MIRc SINE MIR -114 154 66 5 1014 186 103 0 0 chr17 56277912 56277941 -38994710 + (CAGA)n Simple_repeat Simple_repeat 3 31 0 5 1014 242 350 0 63 chr17 56279513 56279687 -38992964 + C-rich Low_complexity Low_complexity 6 168 0 5 1014 297 260 9 28 chr17 56279519 56279626 -38993025 + (TCCG)n Simple_repeat Simple_repeat 2 106 0 5 1014 23 78 0 0 chr17 56279709 56279760 -38992891 + GC_rich Low_complexity Low_complexity 1 51 0 5 1014 182 213 77 62 chr17 56280235 56280300 -38992351 + MIR SINE MIR 71 136 -126 5 1014 184 288 61 0 chr17 56281457 56281523 -38991128 + MIRc SINE MIR 54 123 -145 5 1014 24 0 0 0 chr17 56281914 56281938 -38990713 + GC_rich Low_complexity Low_complexity 1 24 0 5 1014 182 250 0 0 chr17 56282758 56282798 -38989853 - L2b LINE L2 -3 3372 3333 5 1014 200 309 146 12 chr17 56282771 56282853 -38989798 - MIR SINE MIR -10 252 160 5 1014 448 307 114 41 chr17 56283664 56284031 -38988620 + L1MB3 LINE L1 5790 6183 0 5 1014 189 225 0 0 chr17 56284285 56284325 -38988326 - L2b LINE L2 -3 3372 3333 5 1014 205 229 42 0 chr17 56285151 56285199 -38987452 - MIRm SINE MIR -106 170 121 5 1014 243 270 51 51 chr17 56285940 56286018 -38986633 - RSINE1 SINE B4 0 165 88 5 1014 477 266 104 31 chr17 56286063 56286226 -38986425 - ID_B1 SINE B4 -16 208 34 5 1014 241 295 119 20 chr17 56286355 56286489 -38986162 + MIRm SINE MIR 59 200 -8 5 1014 301 222 123 0 chr17 56286509 56286590 -38986061 + PB1D7 SINE Alu 29 119 -1 5 1014 277 309 60 0 chr17 56286627 56286711 -38985940 + ID_B1 SINE B4 53 141 -83 5 1014 237 216 78 0 chr17 56287454 56287505 -38985146 - B4A SINE B4 -237 55 1 5 1014 365 191 60 0 chr17 56288934 56289018 -38983633 + B1F2 SINE Alu 5 93 -56 5 1014 705 254 71 11 chr17 56289179 56289362 -38983289 + ID_B1 SINE B4 24 217 -7 5 1014 235 277 83 12 chr17 56289419 56289503 -38983148 + MIRm SINE MIR 99 188 -88 5 1014 611 136 0 9 chr17 56290098 56290209 -38982442 + (TGGA)n Simple_repeat Simple_repeat 1 110 0 5 1014 884 109 53 26 chr17 56290553 56290704 -38981947 - B2_Mm2 SINE B2 -39 156 2 5 1014 1570 212 91 6 chr17 56290806 56291167 -38981484 + MTD LTR MaLR 18 409 -10 5 1014 184 311 18 64 chr17 56291179 56291289 -38981362 - L2 LINE L2 -1504 1915 1811 5 1014 229 299 0 105 chr17 56291601 56291687 -38980964 - B4A SINE B4 0 292 216 5 1014 1275 48 0 0 chr17 56291707 56291854 -38980797 - B1_Mus2 SINE Alu 0 147 1 6 1014 786 264 9 49 chr17 56291878 56291948 -38980703 - B3 SINE B2 0 216 153 6 1014 2974 138 81 18 chr17 56291948 56292444 -38980207 - RLTR11A LTR ERVK -1 527 1 6 1014 786 264 9 49 chr17 56292444 56292596 -38980055 - B3 SINE B2 -64 152 3 6 1014 358 222 25 0 chr17 56292605 56292686 -38979965 + PB1D9 SINE Alu 24 106 -14 6 1014 191 233 0 0 chr17 56292906 56292949 -38979702 - MIR SINE MIR -122 140 98 6 1014 318 286 0 0 chr17 56293020 56293146 -38979505 + (TG)n Simple_repeat Simple_repeat 1 126 0 6 1014 234 354 136 66 chr17 56293726 56293968 -38978683 + MLT1D LTR MaLR 38 296 -209 6 1014 299 302 25 0 chr17 56294688 56294807 -38977844 + L2b LINE L2 2936 3057 -318 6 1014 297 0 0 0 chr17 56295691 56295724 -38976927 + (CAGA)n Simple_repeat Simple_repeat 3 35 0 6 1014 201 154 0 0 chr17 56295955 56295994 -38976657 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 1014 308 315 18 9 chr17 56296457 56296569 -38976082 + PB1D10 SINE Alu 5 117 0 6 1014 269 278 52 61 chr17 56296621 56296736 -38975915 + ZP3AR Satellite Satellite 95 208 -4 6 1014 271 359 68 0 chr17 56297957 56298074 -38974577 - L2b LINE L2 -10 3365 3241 6 1014 584 202 101 0 chr17 56298126 56298255 -38974396 + ID_B1 SINE B4 83 224 0 6 1014 711 104 0 0 chr17 56298265 56298371 -38974280 + (GGAA)n Simple_repeat Simple_repeat 3 108 0 6 1014 446 283 148 25 chr17 56298424 56298620 -38974031 - ID_B1 SINE B4 -1 223 4 6 1014 2342 101 3 24 chr17 56299493 56299829 -38972822 - ORR1A4 LTR MaLR 0 329 1 6 1014 357 344 119 3 chr17 56299908 56300203 -38972448 - L1MA8 LINE L1 -254 6037 5709 6 1014 371 165 29 108 chr17 56300588 56300690 -38971961 - ZP3AR Satellite Satellite -115 97 4 6 1014 272 281 12 24 chr17 56301041 56301125 -38971526 + MIRm SINE MIR 76 158 -118 6 1014 216 291 80 31 chr17 56302666 56302804 -38969847 + MIRb SINE MIR 48 200 -68 6 1014 504 273 78 34 chr17 56302863 56303068 -38969583 + ID_B1 SINE B4 5 218 -6 6 1014 528 16 0 0 chr17 56303076 56303137 -38969514 + (GA)n Simple_repeat Simple_repeat 2 62 0 6 1014 389 299 56 35 chr17 56304262 56304517 -38968134 - L2b LINE L2 -236 3139 2881 6 1014 367 242 158 0 chr17 56304643 56304738 -38967913 + PB1D7 SINE Alu 2 111 -9 6 1014 261 240 0 0 chr17 56304888 56304938 -38967713 - RSINE1 SINE B4 -113 52 3 6 1014 268 300 62 0 chr17 56305282 56305362 -38967289 + MER63D DNA AcHobo 54 138 -923 6 1014 697 209 22 0 chr17 56305390 56305529 -38967122 - RSINE1 SINE B4 -10 155 14 6 1014 1218 71 0 6 chr17 56305704 56305873 -38966778 + B2_Mm2 SINE B2 2 169 -26 6 1014 837 56 0 0 chr17 56305876 56305983 -38966668 + (GGAAA)n Simple_repeat Simple_repeat 3 109 0 6 1014 1074 43 0 0 chr17 56306272 56306410 -38966241 + B1_Mm SINE Alu 10 147 0 6 1014 333 0 0 0 chr17 56306499 56306536 -38966115 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 1014 424 176 43 61 chr17 56306594 56306709 -38965942 - PB1D9 SINE Alu -5 115 3 6 1014 522 279 164 4 chr17 56306968 56307203 -38965448 - B4A SINE B4 -8 284 12 6 1014 653 243 79 0 chr17 56307563 56307715 -38964936 + ID_B1 SINE B4 59 222 -2 6 1014 230 316 80 29 chr17 56307607 56307719 -38964932 - YREP_Mm Unknown Unknown -1518 294 175 6 1014 1331 52 92 0 chr17 56307719 56307892 -38964759 + B2_Mm2 SINE B2 2 190 -5 6 1014 230 316 80 29 chr17 56307892 56307916 -38964735 - YREP_Mm Unknown Unknown -1638 174 151 6 1014 502 230 9 9 chr17 56308281 56308395 -38964256 + PB1D9 SINE Alu 7 120 0 6 1014 263 284 73 65 chr17 56308750 56308767 -38963884 + PB1 SINE Alu 1 75 -52 6 1014 275 234 165 18 chr17 56308767 56308825 -38963826 + ID_B1 SINE B4 98 156 -68 6 1014 1204 62 0 0 chr17 56308825 56308969 -38963682 + B1_Mus2 SINE Alu 1 144 -3 6 1014 279 0 0 0 chr17 56308969 56309000 -38963651 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1014 263 284 73 65 chr17 56309000 56309047 -38963604 + PB1 SINE Alu 76 124 -3 6 1014 418 214 94 0 chr17 56309813 56309955 -38962696 - ID_B1 SINE B4 -2 222 21 6 1014 197 305 33 17 chr17 56310647 56310738 -38961913 - L2c LINE L2 -184 3191 3102 6 1014 668 164 30 7 chr17 56311844 56311979 -38960672 - ID_B1 SINE B4 -1 223 86 6 1014 358 274 197 15 chr17 56312416 56312553 -38960098 + RSINE1 SINE B4 3 164 -1 6 1014 635 150 92 7 chr17 56312965 56313106 -38959545 + ZP3AR Satellite Satellite 23 175 -37 6 1014 730 168 8 4 chr17 56313361 56313497 -38959154 - B1_Mur4 SINE Alu -17 132 1 6 1014 1217 48 0 20 chr17 56313518 56313668 -38958983 - B1_Mm SINE Alu 0 147 1 6 1014 302 289 85 34 chr17 56313676 56313794 -38958857 - PB1 SINE Alu -3 124 1 6 1014 396 227 102 0 chr17 56314667 56314755 -38957896 - B1_Mur2 SINE Alu -6 143 47 6 1014 966 61 105 8 chr17 56314762 56314895 -38957756 - B1_Mus1 SINE Alu 0 148 3 6 1014 1312 88 66 11 chr17 56315168 56315351 -38957300 - B2_Mm2 SINE B2 -1 194 2 6 1014 299 211 195 3 chr17 56315395 56315526 -38957125 + B3 SINE B2 3 171 -45 6 1014 603 0 0 0 chr17 56315537 56315604 -38957047 + (CA)n Simple_repeat Simple_repeat 2 68 0 6 1014 291 194 34 134 chr17 56316591 56316710 -38955941 + ZP3AR Satellite Satellite 44 150 -62 6 1014 260 328 42 78 chr17 56316766 56316908 -38955743 + MLT1A1 LTR MaLR 271 407 -1 6 1014 370 330 0 0 chr17 56318367 56318467 -38954184 - ID_B1 SINE B4 -7 217 118 6 1014 486 88 0 0 chr17 56318682 56318750 -38953901 + (GGGAGA)n Simple_repeat Simple_repeat 5 72 0 6 1014 980 219 24 9 chr17 56319442 56319654 -38952997 + B3 SINE B2 2 216 0 6 1014 334 229 146 0 chr17 56320019 56320115 -38952536 - ID_B1 SINE B4 -2 222 113 6 1014 319 299 145 0 chr17 56320259 56320500 -38952151 - L1MB7 LINE L1 -99 6085 5810 6 1014 226 228 284 20 chr17 56320665 56320698 -38951953 + B3A SINE B2 4 43 -155 6 1014 1874 206 96 3 chr17 56320698 56321082 -38951569 + MTC LTR MaLR 2 421 0 6 1014 226 228 284 20 chr17 56321082 56321196 -38951455 + B3A SINE B2 44 189 -9 6 1014 821 140 49 0 chr17 56321334 56321477 -38951174 + B3 SINE B2 9 158 -58 6 1014 279 359 68 0 chr17 56322208 56322325 -38950326 + PB1 SINE Alu 3 127 0 6 1014 652 182 24 0 chr17 56322368 56322494 -38950157 + ZP3AR Satellite Satellite 7 135 -77 6 1014 185 338 52 0 chr17 56322646 56322723 -38949928 + L4 LINE RTE 1276 1356 -673 6 1014 436 168 79 16 chr17 56323687 56323802 -38948849 - B1_Mus2 SINE Alu 0 120 9 6 1014 477 0 0 0 chr17 56323842 56323895 -38948756 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1014 987 110 14 7 chr17 56323908 56324054 -38948597 - B1_Mus1 SINE Alu 0 148 2 6 1014 1009 220 29 5 chr17 56324081 56324291 -38948360 + B3 SINE B2 2 216 0 6 1014 304 252 202 0 chr17 56324403 56324522 -38948129 + RSINE1 SINE B4 4 146 -19 6 1014 3366 145 189 48 chr17 56324656 56325461 -38947190 + RMER21A LTR ERV1 1 918 -29 6 1014 400 206 215 0 chr17 56325549 56325656 -38946995 - RSINE1 SINE B4 -34 131 2 6 1014 614 176 27 20 chr17 56325830 56325973 -38946678 - B1_Mur4 SINE Alu -2 148 5 6 1014 180 125 0 0 chr17 56326197 56326229 -38946422 + (T)n Simple_repeat Simple_repeat 1 32 0 6 1014 21 0 0 0 chr17 56326488 56326509 -38946142 + AT_rich Low_complexity Low_complexity 1 21 0 6 1014 472 176 58 10 chr17 56328061 56328164 -38944487 - PB1D10 SINE Alu -7 110 3 6 1014 538 204 105 7 chr17 56328164 56328232 -38944419 - ID SINE ID -139 85 3 6 1014 496 277 11 53 chr17 56329757 56329944 -38942707 + HAL1-2a_MD LINE L1 2345 2523 -501 6 1014 358 250 0 64 chr17 56330919 56331013 -38941638 - PB1D10 SINE Alu -2 115 28 6 1014 1182 227 169 3 chr17 56331025 56331284 -38941367 + ORR1B1 LTR MaLR 1 298 -96 6 1014 1354 91 21 0 chr17 56331284 56331471 -38941180 + B2_Mm2 SINE B2 3 193 -2 6 1014 1182 227 169 3 chr17 56331471 56331542 -38941109 + ORR1B1 LTR MaLR 299 385 -9 6 1014 6303 190 69 12 chr17 56331546 56332961 -38939690 + ORR1B1-int LTR MaLR 1 1495 -14 6 1014 708 165 225 20 chr17 56332958 56333169 -38939482 + ORR1B1 LTR MaLR 106 344 -2 6 1014 1027 105 0 20 chr17 56333442 56333588 -38939063 + B1_Mus1 SINE Alu 5 147 -1 6 1014 825 222 87 0 chr17 56334621 56334806 -38937845 + ID_B1 SINE B4 24 224 0 6 1014 465 185 3 0 chr17 56335891 56336000 -38936651 + PB1D9 SINE Alu 1 110 -10 6 1014 742 226 21 30 chr17 56336403 56336598 -38936053 - B3 SINE B2 0 198 2 6 1014 559 279 94 5 chr17 56336624 56336815 -38935836 - ID_B1 SINE B4 -9 215 8 6 1014 310 269 96 11 chr17 56337266 56337360 -38935291 + MER20 DNA MER1_type 31 132 -87 6 1014 394 263 129 59 chr17 56337835 56337851 -38934800 + RMER10A LTR ERVL 4 19 -423 6 1014 207 0 0 0 chr17 56337851 56337874 -38934777 + (TG)n Simple_repeat Simple_repeat 1 23 0 6 1014 503 260 279 62 chr17 56337874 56338220 -38934431 + RMER10A LTR ERVL 20 441 -1 6 1014 180 0 0 0 chr17 56338226 56338246 -38934405 + (ATTG)n Simple_repeat Simple_repeat 1 20 0 6 1014 374 273 54 9 chr17 56339077 56339188 -38933463 - PB1D10 SINE Alu 0 117 2 6 1014 253 264 56 33 chr17 56339219 56339309 -38933342 - RLTR25A LTR ERVK -490 613 522 6 1014 804 96 0 0 chr17 56339240 56339355 -38933296 - B1_Mus1 SINE Alu -33 115 1 6 1014 466 252 52 26 chr17 56339241 56339364 -38933287 - B4 SINE B4 -88 204 77 6 1014 1047 94 0 0 chr17 56339364 56339513 -38933138 + (CATTC)n Simple_repeat Simple_repeat 2 150 0 6 1014 466 252 52 26 chr17 56339513 56339544 -38933107 - B4 SINE B4 -216 76 46 6 1014 388 216 155 0 chr17 56339604 56339701 -38932950 + ID_B1 SINE B4 87 198 -26 6 1014 223 143 0 0 chr17 56339674 56339709 -38932942 + PB1D10 SINE Alu 62 96 -21 6 1014 421 248 150 0 chr17 56340168 56340301 -38932350 + B3 SINE B2 58 210 -6 7 1014 767 174 72 7 chr17 56340302 56340441 -38932210 + B1_Mur2 SINE Alu 1 148 -1 7 1014 486 0 0 0 chr17 56340466 56340520 -38932131 + (GGAA)n Simple_repeat Simple_repeat 4 57 0 7 1014 417 169 0 0 chr17 56340663 56340746 -38931905 + CT-rich Low_complexity Low_complexity 2 84 0 7 1014 267 31 0 0 chr17 56340954 56340986 -38931665 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 1014 583 253 100 0 chr17 56341168 56341338 -38931313 + B3A SINE B2 12 198 0 7 1014 409 232 24 104 chr17 56341555 56341680 -38930971 + RSINE1 SINE B4 19 133 -32 7 1014 569 259 58 17 chr17 56342918 56343091 -38929560 - ID_B1 SINE B4 -1 223 44 7 1014 487 192 67 0 chr17 56343251 56343355 -38929296 - PB1D10 SINE Alu 0 117 7 7 1014 872 219 22 15 chr17 56344250 56344468 -38928183 + ZP3AR Satellite Satellite 1 219 -1 7 1014 604 303 63 0 chr17 56345564 56345739 -38926912 - ID_B1 SINE B4 -13 211 26 7 1014 316 222 34 92 chr17 56346526 56346645 -38926006 - B4A SINE B4 -116 176 65 7 1014 367 264 78 23 chr17 56347207 56347335 -38925316 - ID_B1 SINE B4 0 224 90 7 1014 404 123 0 174 chr17 56347690 56347788 -38924863 - B1_Mur2 SINE Alu 0 149 69 7 1014 471 199 70 0 chr17 56347792 56347902 -38924749 - B1_Mur1 SINE Alu -27 122 7 7 1014 698 258 0 6 chr17 56347925 56348081 -38924570 + RSINE1 SINE B4 7 161 -4 7 1014 260 211 28 0 chr17 56351498 56351569 -38921082 + ZP3AR Satellite Satellite 51 123 -89 7 1014 276 261 53 0 chr17 56352502 56352596 -38920055 + PB1D9 SINE Alu 13 120 0 7 1014 229 270 113 57 chr17 56352606 56352712 -38919939 + PB1D9 SINE Alu 1 112 -8 7 1014 456 51 119 71 chr17 56352908 56352992 -38919659 + L1_Mus1 LINE L1 6477 6564 -3 7 1014 998 123 0 6 chr17 56352992 56353155 -38919496 + (GAA)n Simple_repeat Simple_repeat 2 163 0 7 1014 1698 31 0 0 chr17 56353527 56353720 -38918931 + B2_Mm1t SINE B2 1 193 0 7 1014 319 252 5 14 chr17 56355150 56355372 -38917279 + GA-rich Low_complexity Low_complexity 1 219 0 7 1014 216 242 12 71 chr17 56358009 56358178 -38914473 + (CGCGG)n Simple_repeat Simple_repeat 1 159 0 7 1014 285 213 0 0 chr17 56358556 56358617 -38914034 + tRNA-Gly-GGA tRNA tRNA 4 64 -11 7 1014 1061 62 21 0 chr17 56358733 56358877 -38913774 - B1_Mus2 SINE Alu 0 147 1 7 1014 1161 109 53 16 chr17 56358952 56359139 -38913512 - B2_Mm2 SINE B2 -1 194 1 7 1014 315 255 160 0 chr17 56359568 56359662 -38912989 - PB1D10 SINE Alu -8 109 1 7 1014 3266 48 13 5 chr17 56359837 56360230 -38912421 - MTA_Mm LTR MaLR 0 396 1 7 126 7411 87 23 74 chr17 56360231 56361385 -38911266 - MTA_Mm-int LTR MaLR -2 1096 1 7 1015 3991 24 42 0 chr17 56361387 56361843 -38910808 - MT2C_Mm LTR ERVL 0 475 1 7 1015 430 84 25 21 chr17 56362513 56362597 -38910054 + B2_Mm2 SINE B2 89 176 -19 7 1015 333 0 0 0 chr17 56362597 56362634 -38910017 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 7 1015 1009 82 44 0 chr17 56362636 56362771 -38909880 - B1_Mm SINE Alu -6 141 1 7 1015 1267 38 0 0 chr17 56362911 56363070 -38909581 + B2_Mm1a SINE B2 2 160 -33 7 1015 209 30 0 57 chr17 56363070 56363105 -38909546 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 7 1015 646 145 128 15 chr17 56363105 56363225 -38909426 + B1_Mur3 SINE Alu 2 136 -13 7 1015 216 0 0 0 chr17 56363225 56363249 -38909402 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 7 1015 646 145 128 15 chr17 56363249 56363261 -38909390 + B1_Mur3 SINE Alu 137 148 -1 7 1015 266 194 259 46 chr17 56363356 56363464 -38909187 + MT2A LTR ERVL 4 134 -399 7 1015 886 239 90 13 chr17 56363493 56363733 -38908918 + MT2A LTR ERVL 214 536 -48 7 1015 564 77 0 0 chr17 56363889 56363967 -38908684 + (TTGG)n Simple_repeat Simple_repeat 2 79 0 7 1015 762 176 301 21 chr17 56363986 56364282 -38908369 + MTC LTR MaLR 20 421 0 7 1015 334 253 0 0 chr17 56364308 56364387 -38908264 + PB1D7 SINE Alu 15 93 -27 7 1015 268 273 13 0 chr17 56364441 56364518 -38908133 + CT-rich Low_complexity Low_complexity 2 79 0 7 1015 334 158 65 13 chr17 56364662 56364739 -38907912 + PB1D9 SINE Alu 40 120 0 7 1015 1265 34 0 0 chr17 56364766 56364913 -38907738 + B1_Mus2 SINE Alu 1 147 0 7 1015 324 0 0 0 chr17 56364913 56364949 -38907702 + (A)n Simple_repeat Simple_repeat 1 36 0 7 1015 1516 133 47 172 chr17 56365055 56365463 -38907188 + RLTR23 LTR ERV1 10 366 -64 7 1015 302 357 21 31 chr17 56365497 56365688 -38906963 + MuRRS-int LTR ERV1 2116 2304 -2386 7 1015 1585 42 5 5 chr17 56365808 56366001 -38906650 + B2_Mm1a SINE B2 1 193 0 7 1015 340 236 23 23 chr17 56366218 56366306 -38906345 + RLTR6-int LTR ERV1 3316 3394 -4384 7 1015 3806 118 206 0 chr17 56366307 56366918 -38905733 + RMER19A LTR ERVK 1 737 0 7 1015 4098 115 8 6 chr17 56366918 56367826 -38904825 + MurERV4_19-int LTR ERVK 2714 3305 -2475 7 1015 562 261 22 0 chr17 56367880 56368018 -38904633 + ID_B1 SINE B4 67 207 -17 7 1015 546 114 0 0 chr17 56368024 56368112 -38904539 + (TC)n Simple_repeat Simple_repeat 2 89 0 7 1015 452 262 148 7 chr17 56368678 56368820 -38903831 - RSINE1 SINE B4 0 165 4 7 1015 376 185 91 16 chr17 56368950 56369065 -38903586 - PB1D9 SINE Alu 0 117 1 7 1015 204 40 0 0 chr17 56369653 56369678 -38902973 + (TCTCCC)n Simple_repeat Simple_repeat 5 29 0 7 1015 805 206 7 0 chr17 56370247 56370388 -38902263 + B1_Mus1 SINE Alu 1 142 -6 7 1015 892 255 24 5 chr17 56370416 56370621 -38902030 - B3 SINE B2 -6 210 2 7 1015 284 191 143 0 chr17 56370651 56370714 -38901937 - PB1D10 SINE Alu -21 96 25 7 1015 810 194 0 0 chr17 56370741 56370880 -38901771 - B1_Mur4 SINE Alu -2 148 10 7 1015 468 278 40 40 chr17 56370746 56370896 -38901755 - ID_B1 SINE B4 -7 217 68 7 1015 333 0 0 0 chr17 56370898 56370935 -38901716 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 7 1015 669 136 0 0 chr17 56370935 56371038 -38901613 - B1_Mur4 SINE Alu -12 138 36 7 1015 329 0 24 0 chr17 56371277 56371318 -38901333 + (TTTA)n Simple_repeat Simple_repeat 4 45 0 7 1015 1158 69 21 0 chr17 56371510 56371655 -38900996 + B1_Mus1 SINE Alu 1 148 0 7 1015 650 117 0 10 chr17 56371672 56371776 -38900875 + B2_Mm2 SINE B2 27 129 -66 7 1015 375 286 233 8 chr17 56371906 56372026 -38900625 - RSINE1 SINE B4 -16 149 3 7 1015 207 0 0 0 chr17 56372051 56372074 -38900577 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 7 1015 374 106 0 5 chr17 56372088 56372153 -38900498 - B2_Mm2 SINE B2 -107 109 47 7 1015 1419 94 5 0 chr17 56372210 56372402 -38900249 - B2_Mm1a SINE B2 0 193 1 7 1015 1234 113 23 0 chr17 56372403 56372580 -38900071 - B2_Mm2 SINE B2 -14 181 1 7 1015 25 0 0 0 chr17 56372590 56372615 -38900036 + AT_rich Low_complexity Low_complexity 1 25 0 7 1015 180 0 0 0 chr17 56372620 56372640 -38900011 + (TTG)n Simple_repeat Simple_repeat 2 21 0 7 1015 1183 56 0 0 chr17 56372640 56372778 -38899873 - B1_Mm SINE Alu -8 139 2 7 1015 204 125 0 0 chr17 56372851 56372883 -38899768 + (TTA)n Simple_repeat Simple_repeat 1 32 0 7 1015 407 285 131 0 chr17 56373831 56373968 -38898683 + RSINE1 SINE B4 3 157 -8 7 1015 1449 84 16 0 chr17 56374050 56374241 -38898410 - B2_Mm2 SINE B2 0 195 2 7 1015 419 346 6 30 chr17 56374274 56374441 -38898210 - RSINE1 SINE B4 0 165 3 7 1015 216 377 0 0 chr17 56374727 56374833 -38897818 - PB1D10 SINE Alu -11 106 1 7 1015 573 242 39 7 chr17 56374910 56375064 -38897587 - ZP3AR Satellite Satellite -52 160 2 7 1015 655 142 9 17 chr17 56375369 56375484 -38897167 + B1_Mur4 SINE Alu 37 150 0 7 1015 1115 43 35 0 chr17 56375489 56375630 -38897021 + B1_Mus2 SINE Alu 2 147 0 7 1015 760 194 0 27 chr17 56375632 56375727 -38896924 + polypurine Low_complexity Low_complexity 1 91 0 7 1015 1174 120 55 0 chr17 56375727 56375910 -38896741 + B2_Mm1t SINE B2 1 193 0 7 1015 760 194 0 27 chr17 56375910 56375999 -38896652 + polypurine Low_complexity Low_complexity 92 180 0 7 1015 309 179 43 43 chr17 56376016 56376086 -38896565 + L1MEg LINE L1 1883 1952 -4132 7 1015 282 180 0 0 chr17 56376448 56376498 -38896153 + ZP3AR Satellite Satellite 13 62 -150 7 1015 397 202 67 0 chr17 56376587 56376676 -38895975 + PB1D9 SINE Alu 22 116 -4 7 1015 1480 78 5 0 chr17 56376679 56376870 -38895781 + B2_Mm1t SINE B2 1 192 -1 7 1015 1243 54 0 0 chr17 56376871 56377018 -38895633 + B1_Mm SINE Alu 1 147 0 7 1015 189 175 0 0 chr17 56377589 56377629 -38895022 + CT-rich Low_complexity Low_complexity 3 42 0 7 1015 1159 75 7 0 chr17 56377930 56378077 -38894574 + B1_Mus1 SINE Alu 1 148 0 7 1015 976 136 0 45 chr17 56378120 56378274 -38894377 + B1_Mus1 SINE Alu 2 148 0 7 1015 220 52 32 65 chr17 56378901 56378963 -38893688 + (CAAAAA)n Simple_repeat Simple_repeat 2 61 0 7 1015 382 302 34 8 chr17 56379130 56379247 -38893404 + PB1D7 SINE Alu 1 120 0 7 1015 314 241 138 0 chr17 56379253 56379340 -38893311 + B4A SINE B4 4 102 -190 7 1015 452 321 38 0 chr17 56379521 56379652 -38892999 + RSINE1 SINE B4 24 159 -6 7 1015 885 149 0 20 chr17 56379780 56379921 -38892730 + B1_Mur4 SINE Alu 1 141 -9 7 1015 243 88 0 0 chr17 56379921 56379955 -38892696 + (CAAG)n Simple_repeat Simple_repeat 2 35 0 7 1015 486 0 0 0 chr17 56380063 56380117 -38892534 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 7 1015 229 250 0 0 chr17 56380492 56380544 -38892107 + B1F1 SINE Alu 12 63 -86 7 1015 466 290 86 0 chr17 56380573 56380735 -38891916 + ID_B1 SINE B4 1 176 -48 8 1015 374 179 0 25 chr17 56380679 56380759 -38891892 + PB1D10 SINE Alu 40 117 0 8 1015 510 157 0 22 chr17 56381822 56381913 -38890738 - B1_Mur4 SINE Alu 0 150 62 8 1015 510 242 85 8 chr17 56382073 56382202 -38890449 - ID_B1 SINE B4 -2 222 84 8 1015 478 340 45 0 chr17 56382760 56382916 -38889735 + RSINE1 SINE B4 3 165 0 8 1015 22 35 0 0 chr17 56382927 56382956 -38889695 + AT_rich Low_complexity Low_complexity 1 29 0 8 1015 1717 16 11 0 chr17 56382968 56383159 -38889492 + B2_Mm1a SINE B2 1 193 0 8 1015 714 192 0 0 chr17 56383185 56383305 -38889346 - B1_Mus2 SINE Alu -13 134 15 8 1015 281 345 73 0 chr17 56383212 56383322 -38889329 - B4 SINE B4 -94 198 81 8 1015 1050 58 65 0 chr17 56383325 56383463 -38889188 - B1_Mus1 SINE Alu 0 148 2 8 1015 408 216 10 10 chr17 56383569 56383667 -38888984 - ID_B1 SINE B4 -9 215 118 8 1015 1349 196 170 22 chr17 56383924 56384289 -38888362 - MTD LTR MaLR 0 419 1 8 1015 558 213 50 0 chr17 56384523 56384664 -38887987 - ZP3AR Satellite Satellite -14 198 51 8 1015 457 216 43 43 chr17 56384775 56384891 -38887760 - PB1D9 SINE Alu 0 120 5 8 1015 260 236 27 14 chr17 56384916 56384989 -38887662 - PB1D10 SINE Alu -1 116 43 8 1015 192 371 33 33 chr17 56385006 56385098 -38887553 + MIRm SINE MIR 179 270 -6 8 1015 194 207 0 17 chr17 56385622 56385681 -38886970 + CT-rich Low_complexity Low_complexity 3 60 0 8 1015 826 192 0 0 chr17 56385700 56385830 -38886821 - B1_Mus1 SINE Alu -14 134 5 8 1015 451 243 418 0 chr17 56385909 56386099 -38886552 + MTD LTR MaLR 5 274 -145 8 1015 743 223 28 71 chr17 56386210 56386422 -38886229 + ID_B1 SINE B4 22 224 0 8 1015 794 116 21 42 chr17 56386429 56386573 -38886078 + B1_Mur4 SINE Alu 10 150 0 8 1015 342 290 21 21 chr17 56386600 56386695 -38885956 + RSINE1 SINE B4 2 96 -69 8 1015 730 222 84 0 chr17 56386749 56386897 -38885754 + B3 SINE B2 1 153 -63 8 1015 450 0 0 0 chr17 56386897 56386947 -38885704 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 1015 730 222 84 0 chr17 56386947 56386965 -38885686 + B3 SINE B2 154 179 -37 8 1015 273 324 0 0 chr17 56387184 56387255 -38885396 - B4 SINE B4 0 292 222 8 1015 545 270 24 30 chr17 56387297 56387461 -38885190 - RSINE1 SINE B4 -1 164 2 8 1015 491 245 0 0 chr17 56387482 56387580 -38885071 - B1F SINE Alu -51 98 1 8 1015 335 187 133 0 chr17 56388023 56388098 -38884553 - Lx8 LINE L1 -699 6774 6690 8 1015 291 275 236 9 chr17 56388193 56388303 -38884348 - RSINE1 SINE B4 -29 136 2 8 1015 596 177 159 0 chr17 56388326 56388439 -38884212 + B1_Mm SINE Alu 1 131 -16 8 1015 216 97 0 0 chr17 56388440 56388471 -38884180 + (GGA)n Simple_repeat Simple_repeat 3 33 0 8 1015 1163 88 0 0 chr17 56388473 56388620 -38884031 + B1_Mus2 SINE Alu 1 147 0 8 1015 289 174 29 0 chr17 56388623 56388692 -38883959 + A-rich Low_complexity Low_complexity 3 73 0 8 1015 386 198 37 0 chr17 56388695 56388776 -38883875 - PB1D7 SINE Alu -1 119 36 8 1015 539 271 220 0 chr17 56388914 56389091 -38883560 - ID_B1 SINE B4 -6 218 3 8 1015 366 261 38 12 chr17 56389115 56389232 -38883419 - PB1D7 SINE Alu 0 120 3 8 1015 296 284 273 38 chr17 56389236 56389445 -38883206 + MER74C LTR ERVL 11 268 -192 8 1015 567 74 0 0 chr17 56389468 56389549 -38883102 + (CA)n Simple_repeat Simple_repeat 1 81 0 8 1015 644 192 221 0 chr17 56389819 56389991 -38882660 - B3 SINE B2 -2 214 5 8 1015 327 289 115 0 chr17 56390199 56390303 -38882348 - PB1D10 SINE Alu -1 116 1 8 1015 342 65 48 0 chr17 56390526 56390588 -38882063 + (CCCCCA)n Simple_repeat Simple_repeat 4 68 0 8 1015 301 212 0 59 chr17 56390947 56391032 -38881619 + ZP3AR Satellite Satellite 51 130 -82 8 1015 285 29 0 0 chr17 56391261 56391295 -38881356 + (T)n Simple_repeat Simple_repeat 1 34 0 8 1015 1278 34 0 0 chr17 56391295 56391441 -38881210 - B1_Mus2 SINE Alu 0 147 2 8 1015 241 333 113 0 chr17 56391638 56391779 -38880872 - MER2 DNA MER2_type -133 212 56 8 1015 565 200 9 0 chr17 56391746 56391856 -38880795 + PB1D9 SINE Alu 10 120 0 8 1015 422 150 12 59 chr17 56391928 56392013 -38880638 - B1_Mus2 SINE Alu -10 137 57 8 1015 281 213 68 87 chr17 56392029 56392132 -38880519 - PB1D10 SINE Alu -9 108 8 8 1015 1395 86 43 0 chr17 56392170 56392356 -38880295 + B2_Mm2 SINE B2 1 194 -1 8 1015 1165 55 7 7 chr17 56392359 56392505 -38880146 + B1_Mus1 SINE Alu 3 148 0 8 1015 357 320 0 55 chr17 56392517 56392626 -38880025 + L1MEg LINE L1 1877 1979 -4105 8 1015 304 329 64 83 chr17 56392734 56392890 -38879761 + RSINE1 SINE B4 13 165 0 8 1015 399 181 0 24 chr17 56392949 56393034 -38879617 + L1_Mus1 LINE L1 6485 6567 0 8 1015 247 318 44 26 chr17 56393125 56393238 -38879413 + B4A SINE B4 168 282 -10 8 1015 451 301 67 22 chr17 56393284 56393464 -38879187 + B3A SINE B2 2 189 -9 8 1015 265 221 14 14 chr17 56393493 56393562 -38879089 + ID4 SINE ID 13 81 -2 8 1015 1442 60 11 0 chr17 56393833 56394015 -38878636 + B2_Mm1a SINE B2 1 184 -9 8 1015 21 36 0 0 chr17 56394052 56394080 -38878571 + AT_rich Low_complexity Low_complexity 1 28 0 8 1015 946 92 27 40 chr17 56394084 56394232 -38878419 - B1_Mur4 SINE Alu -2 148 3 8 1015 603 300 26 13 chr17 56394606 56394758 -38877893 + RSINE1 SINE B4 6 159 -6 8 1015 463 277 0 0 chr17 56394797 56394898 -38877753 - RSINE1 SINE B4 -8 157 57 8 1015 263 304 11 0 chr17 56394980 56395072 -38877579 + B3 SINE B2 72 164 -52 8 1015 33 0 0 0 chr17 56395074 56395107 -38877544 + AT_rich Low_complexity Low_complexity 1 33 0 8 1015 734 168 8 8 chr17 56395115 56395241 -38877410 - B3 SINE B2 -90 126 1 8 1015 389 265 42 17 chr17 56399613 56399732 -38872919 + B1F1 SINE Alu 7 128 -21 8 1015 359 278 34 77 chr17 56400392 56400509 -38872142 + B1_Mur2 SINE Alu 38 149 0 8 1015 548 131 262 0 chr17 56401162 56401269 -38871382 + B1_Mur3 SINE Alu 2 136 -13 8 1015 426 193 242 27 chr17 56401288 56401437 -38871214 - B3A SINE B2 -16 182 2 8 1015 285 280 0 0 chr17 56401536 56401611 -38871040 - L1MB7 LINE L1 -41 6143 6069 8 1015 196 295 33 0 chr17 56402132 56402193 -38870458 + MIR SINE MIR 84 146 -116 8 1015 266 242 0 88 chr17 56402397 56402465 -38870186 - ID_B1 SINE B4 -24 200 139 8 1015 306 122 0 0 chr17 56402956 56403005 -38869646 - B1F SINE Alu 0 149 101 8 1015 186 43 0 0 chr17 56403021 56403044 -38869607 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 1015 666 92 392 0 chr17 56403044 56403174 -38869477 - B2_Mm2 SINE B2 -13 182 2 8 1015 1699 26 0 10 chr17 56403215 56403410 -38869241 - B2_Mm1a SINE B2 0 193 1 8 1015 236 190 0 17 chr17 56403526 56403585 -38869066 + ID4 SINE ID 2 59 -24 8 1015 536 249 159 0 chr17 56403665 56403854 -38868797 - B4A SINE B4 -73 219 1 8 1015 1628 32 0 16 chr17 56403938 56404130 -38868521 - B2_Mm1t SINE B2 -3 190 2 8 1015 480 245 51 38 chr17 56404150 56404307 -38868344 - B3A SINE B2 -21 177 19 8 1015 245 313 8 94 chr17 56404966 56405002 -38867649 + MT2B LTR ERVL 111 199 -402 8 1015 360 185 134 12 chr17 56405002 56405023 -38867628 + ID SINE ID 50 80 -144 8 1015 504 81 0 0 chr17 56405023 56405097 -38867554 + B1_Mus1 SINE Alu 1 74 -74 8 1015 1037 53 0 50 chr17 56405097 56405237 -38867414 - B1_Mm SINE Alu -14 133 1 8 1015 1051 129 87 27 chr17 56405237 56405419 -38867232 - B2_Mm2 SINE B2 0 195 2 8 1015 616 232 113 0 chr17 56405436 56405578 -38867073 - RSINE1 SINE B4 -6 159 2 8 1015 478 262 144 20 chr17 56406195 56406390 -38866261 + ID_B1 SINE B4 3 221 -3 8 1015 629 172 111 7 chr17 56406392 56406514 -38866137 + B1F2 SINE Alu 1 137 -12 8 1015 877 65 186 0 chr17 56406514 56406638 -38866013 + B1_Mus1 SINE Alu 2 148 0 8 1015 629 172 111 7 chr17 56406638 56406650 -38866001 + B1F2 SINE Alu 138 149 0 8 1015 1388 89 5 5 chr17 56406694 56406885 -38865766 - B2_Mm1a SINE B2 0 193 3 8 1015 411 184 27 18 chr17 56406893 56407004 -38865647 + CT-rich Low_complexity Low_complexity 1 112 0 8 1015 1145 84 12 0 chr17 56407009 56407175 -38865476 + (TTTC)n Simple_repeat Simple_repeat 2 169 0 8 1015 387 179 400 0 chr17 56407180 56407275 -38865376 - B1_Mus1 SINE Alu -15 133 1 8 1015 234 155 362 0 chr17 56407347 56407405 -38865246 + B2_Mm2 SINE B2 1 79 -116 8 1015 1006 150 128 15 chr17 56407416 56407619 -38865032 - URR1A DNA MER1_type 0 226 1 8 1015 317 236 42 0 chr17 56407756 56407828 -38864823 - URR1A DNA MER1_type -151 75 1 8 1015 206 105 26 0 chr17 56407870 56407908 -38864743 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 1015 376 187 186 41 chr17 56407914 56408059 -38864592 + B3A SINE B2 25 190 -8 8 1015 1639 52 0 0 chr17 56408094 56408286 -38864365 + B2_Mm1a SINE B2 2 193 0 8 1015 254 306 27 14 chr17 56408444 56408517 -38864134 + RSINE1 SINE B4 84 157 -8 8 1015 271 24 0 23 chr17 56408600 56408643 -38864008 + B1_Mus2 SINE Alu 105 146 -1 8 1015 229 242 61 0 chr17 56408686 56408752 -38863899 + MLT1J LTR MaLR 100 169 -343 8 1015 242 145 0 88 chr17 56409561 56409629 -38863022 + GA-rich Low_complexity Low_complexity 1 62 0 9 1015 245 363 88 0 chr17 56413504 56413617 -38859034 + L2b LINE L2 3237 3359 -16 9 1015 416 255 0 50 chr17 56413623 56413722 -38858929 + RSINE1 SINE B4 3 96 -69 9 1015 281 220 35 115 chr17 56413726 56413839 -38858812 + MT2B LTR ERVL 152 255 -346 9 1015 538 150 78 17 chr17 56413742 56413857 -38858794 + B1_Mus2 SINE Alu 5 126 -21 9 1015 207 211 0 0 chr17 56413868 56413906 -38858745 + MIRb SINE MIR 217 254 -14 9 1015 274 313 0 0 chr17 56413918 56413985 -38858666 + ID SINE ID 6 72 -152 9 1015 316 161 235 0 chr17 56414113 56414194 -38858457 - ID_B1 SINE B4 0 224 125 9 1015 204 0 54 27 chr17 56414252 56414273 -38858378 + (TTTC)n Simple_repeat Simple_repeat 3 24 0 9 1015 1741 21 0 0 chr17 56414273 56414465 -38858186 - B2_Mm1a SINE B2 0 193 2 9 1015 204 0 54 27 chr17 56414465 56414480 -38858171 + (TTTC)n Simple_repeat Simple_repeat 3 18 0 9 1015 280 257 44 71 chr17 56414503 56414514 -38858137 + B1F2 SINE Alu 38 48 -101 9 1015 926 156 0 26 chr17 56414514 56414597 -38858054 - B1_Mur4 SINE Alu -2 148 67 9 1015 1402 82 27 0 chr17 56414597 56414781 -38857870 + B2_Mm1a SINE B2 3 191 -2 9 1015 926 156 0 26 chr17 56414781 56414848 -38857803 - B1_Mur4 SINE Alu -84 66 2 9 1015 307 199 50 81 chr17 56414848 56414949 -38857702 + B1F SINE Alu 49 147 -2 9 1015 1183 68 7 0 chr17 56414952 56415098 -38857553 + B1_Mus2 SINE Alu 1 147 0 9 1015 189 0 0 0 chr17 56415098 56415119 -38857532 + (A)n Simple_repeat Simple_repeat 1 21 0 9 1015 236 180 11 63 chr17 56415165 56415260 -38857391 + GA-rich Low_complexity Low_complexity 6 95 0 9 1015 1163 68 7 0 chr17 56415299 56415446 -38857205 + B1_Mus1 SINE Alu 1 148 0 9 1015 359 289 0 37 chr17 56416482 56416590 -38856061 + PB1D7 SINE Alu 10 113 -7 9 1015 1231 115 5 47 chr17 56416900 56417091 -38855560 - B2_Mm2 SINE B2 -11 184 2 9 1015 512 239 44 9 chr17 56418015 56418129 -38854522 - ID_B1 SINE B4 0 224 107 9 1015 240 305 87 62 chr17 56418399 56418560 -38854091 - LTR45 LTR ERV1 -245 280 116 9 1015 946 31 0 23 chr17 56418564 56418694 -38853957 + B1_Mm SINE Alu 21 147 0 9 1015 422 303 22 36 chr17 56418771 56418908 -38853743 - ID_B1 SINE B4 0 224 90 9 1015 198 0 0 0 chr17 56418930 56418952 -38853699 + (T)n Simple_repeat Simple_repeat 1 22 0 9 1015 872 76 2 29 chr17 56419803 56419962 -38852689 + B1_Mm SINE Alu 2 149 0 9 1015 301 98 0 0 chr17 56420402 56420443 -38852208 - B1_Mur1 SINE Alu -36 113 73 9 1015 229 212 45 101 chr17 56421089 56421178 -38851473 + PB1D10 SINE Alu 34 117 0 9 1015 508 292 47 7 chr17 56421264 56421412 -38851239 + RSINE1 SINE B4 3 156 -9 9 1015 1087 71 14 0 chr17 56421455 56421595 -38851056 + B1_Mus1 SINE Alu 1 142 -6 9 1015 351 222 0 0 chr17 56421598 56421679 -38850972 + (CATATA)n Simple_repeat Simple_repeat 3 83 0 9 1015 241 323 40 30 chr17 56421686 56421785 -38850866 - RMER12 LTR ERVK -485 837 738 9 1015 232 280 82 51 chr17 56421749 56421847 -38850804 + B4A SINE B4 126 226 -66 9 1015 295 181 10 135 chr17 56421837 56421933 -38850718 + RLTR25B LTR ERVK 438 521 -507 9 1015 730 59 0 19 chr17 56421851 56421955 -38850696 + B1_Mus2 SINE Alu 46 147 0 9 1015 708 162 8 25 chr17 56422098 56422218 -38850433 - PB1D9 SINE Alu 0 120 3 9 1015 523 291 70 20 chr17 56422413 56422613 -38850038 - ID_B1 SINE B4 -12 212 3 9 1015 406 283 9 0 chr17 56422628 56422734 -38849917 - PB1D10 SINE Alu -8 109 3 9 1015 1602 47 5 0 chr17 56423124 56423315 -38849336 + B2_Mm1a SINE B2 2 193 0 9 1015 321 272 49 0 chr17 56423336 56423417 -38849234 + RSINE1 SINE B4 11 95 -70 9 1015 253 57 0 0 chr17 56423991 56424026 -38848625 + B1_Mur2 SINE Alu 78 112 -37 9 1015 607 235 193 0 chr17 56424126 56424292 -38848359 - B3A SINE B2 0 198 1 9 1015 704 182 44 0 chr17 56424337 56424474 -38848177 - RSINE1 SINE B4 -21 144 2 9 1015 245 237 0 92 chr17 56424476 56424541 -38848110 - ID_B1 SINE B4 -4 220 162 9 1015 747 188 105 0 chr17 56424966 56425147 -38847504 + ZP3AR Satellite Satellite 12 211 -1 9 1015 210 164 118 15 chr17 56425135 56425203 -38847448 + PB1D10 SINE Alu 40 114 -3 9 1015 432 164 17 0 chr17 56426269 56426359 -38846292 - PB1D9 SINE Alu -5 145 45 9 1015 364 300 95 53 chr17 56426392 56426582 -38846069 + ID_B1 SINE B4 22 219 -5 9 1015 233 169 0 17 chr17 56426589 56426649 -38846002 + GA-rich Low_complexity Low_complexity 1 59 0 9 1015 647 190 0 17 chr17 56426664 56426782 -38845869 + ID_B1 SINE B4 109 224 0 9 1015 397 219 10 40 chr17 56426804 56426904 -38845747 + PB1D9 SINE Alu 24 120 0 9 1015 1224 55 0 0 chr17 56426905 56427051 -38845600 + B1_Mm SINE Alu 2 147 0 9 1015 258 193 0 0 chr17 56427051 56427108 -38845543 + A-rich Low_complexity Low_complexity 1 57 0 9 1015 510 249 63 70 chr17 56427497 56427704 -38844947 - ZP3AR Satellite Satellite -2 205 1 9 1015 541 241 83 36 chr17 56428052 56428207 -38844444 + B3A SINE B2 23 190 -8 9 1015 563 189 81 0 chr17 56428207 56428318 -38844333 + PB1D7 SINE Alu 1 120 0 9 1015 541 241 83 36 chr17 56428318 56428330 -38844321 + B3A SINE B2 191 198 0 9 1015 549 254 72 28 chr17 56428343 56428527 -38844124 - B3A SINE B2 -8 187 3 9 1015 467 215 97 62 chr17 56428675 56428819 -38843832 + ID_B1 SINE B4 55 203 -21 9 1015 389 303 7 36 chr17 56431367 56431504 -38841147 - RSINE1 SINE B4 -31 134 2 9 1015 406 281 89 63 chr17 56431611 56431801 -38840850 + ID_B1 SINE B4 29 223 -1 9 1015 498 273 8 0 chr17 56433118 56433239 -38839412 - ID_B1 SINE B4 -17 207 86 9 1015 666 286 71 0 chr17 56433329 56433511 -38839140 - ID_B1 SINE B4 -1 223 29 9 1015 654 265 46 64 chr17 56434280 56434498 -38838153 + ID_B1 SINE B4 1 214 -10 9 1015 242 179 0 56 chr17 56434506 56434534 -38838117 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 9 1015 503 195 230 0 chr17 56434534 56434641 -38838010 + B1_Mus2 SINE Alu 1 133 -14 9 1015 522 0 0 0 chr17 56434641 56434699 -38837952 + (CAAAA)n Simple_repeat Simple_repeat 5 62 0 9 1015 242 179 0 56 chr17 56434704 56434746 -38837905 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 9 1015 753 70 0 0 chr17 56434994 56435094 -38837557 + (TCTA)n Simple_repeat Simple_repeat 1 100 0 9 1015 730 220 35 0 chr17 56435095 56435236 -38837415 - B1_Mus2 SINE Alu 0 147 2 9 1015 435 296 0 0 chr17 56435260 56435368 -38837283 - B1F1 SINE Alu -41 108 1 9 1015 442 213 10 41 chr17 56435418 56435516 -38837135 + RSINE1 SINE B4 37 131 -34 9 1015 1175 55 7 7 chr17 56436784 56436931 -38835720 - B1_Mm SINE Alu 0 147 1 9 1015 402 330 0 25 chr17 56437047 56437165 -38835486 - RSINE1 SINE B4 -48 117 3 9 1015 186 227 61 0 chr17 56437293 56437359 -38835292 + L2b LINE L2 3275 3344 -31 9 1015 468 0 0 0 chr17 56437591 56437643 -38835008 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 9 1015 784 73 0 0 chr17 56437643 56437752 -38834899 - B1_Mus1 SINE Alu -9 139 31 9 1015 186 373 82 7 chr17 56437765 56437900 -38834751 + L2a LINE L2 3282 3426 0 9 1015 782 155 122 106 chr17 56437922 56438110 -38834541 - B2_Mm2 SINE B2 -2 193 3 9 1015 1240 93 6 17 chr17 56438148 56438323 -38834328 - B2_Mm1t SINE B2 -19 174 2 9 1015 386 218 160 34 chr17 56438328 56438477 -38834174 - ID_B1 SINE B4 -69 223 45 9 1015 295 274 0 50 chr17 56438449 56438549 -38834102 - B1F SINE Alu -39 110 16 9 1015 1107 202 9 27 chr17 56438615 56438834 -38833817 + B3 SINE B2 1 215 -1 9 1015 503 137 168 17 chr17 56438852 56438971 -38833680 + B1_Mus2 SINE Alu 11 147 0 9 1015 227 294 71 0 chr17 56439782 56439867 -38832784 - ID_B1 SINE B4 -12 212 122 9 1015 3081 79 12 5 chr17 56439937 56440355 -38832296 - BGLII LTR ERVK 0 421 1 9 1015 306 306 108 0 chr17 56440358 56440469 -38832182 + PB1 SINE Alu 3 125 -2 9 1015 335 209 115 0 chr17 56440475 56440581 -38832070 + B1F SINE Alu 17 131 -16 9 1015 368 236 142 31 chr17 56440659 56440786 -38831865 - RSINE1 SINE B4 0 165 25 9 1015 198 0 0 0 chr17 56440794 56440816 -38831835 + (T)n Simple_repeat Simple_repeat 1 22 0 9 1015 1198 74 0 0 chr17 56440816 56440964 -38831687 - B1_Mus1 SINE Alu 0 148 1 9 1015 1654 21 0 15 chr17 56440979 56441175 -38831476 - B2_Mm1a SINE B2 0 193 1 9 1015 1378 66 43 11 chr17 56441181 56441366 -38831285 - B2_Mm2 SINE B2 -4 191 1 9 1015 253 277 60 60 chr17 56441406 56441506 -38831145 - PB1D10 SINE Alu -5 112 13 9 1015 589 263 26 7 chr17 56441649 56441802 -38830849 + ID_B1 SINE B4 67 222 -2 9 1015 241 321 63 35 chr17 56441677 56441819 -38830832 - YREP_Mm Unknown Unknown -1512 300 155 9 1015 258 32 0 0 chr17 56443955 56443986 -38828665 + (TG)n Simple_repeat Simple_repeat 1 31 0 9 1015 342 0 0 0 chr17 56444094 56444132 -38828519 + (TGAA)n Simple_repeat Simple_repeat 2 39 0 9 1015 195 100 0 0 chr17 56444475 56444505 -38828146 + (TC)n Simple_repeat Simple_repeat 1 30 0 9 1015 310 160 77 34 chr17 56445827 56445930 -38826721 - PB1D10 SINE Alu -3 114 8 9 1015 345 212 280 0 chr17 56447080 56447198 -38825453 - RSINE1 SINE B4 -10 155 5 9 1015 334 270 255 7 chr17 56447198 56447347 -38825304 - ID_B1 SINE B4 -1 223 38 1 1015 1356 86 38 0 chr17 56449307 56449493 -38823158 - B2_Mm2 SINE B2 -2 193 1 1 1015 855 96 176 0 chr17 56449509 56449634 -38823017 - B1_Mus1 SINE Alu -1 147 1 1 1015 385 247 4 13 chr17 56449932 56450044 -38822607 + PB1D10 SINE Alu 5 116 -33 1 1015 291 28 0 0 chr17 56450452 56450488 -38822163 + (TC)n Simple_repeat Simple_repeat 2 37 0 1 1015 832 25 240 16 chr17 56450499 56450620 -38822031 - B1_Mus1 SINE Alu 0 148 1 1 1015 230 291 35 88 chr17 56451955 56452068 -38820583 + B3A SINE B2 14 120 -78 1 1015 314 312 226 6 chr17 56452728 56452905 -38819746 + B4A SINE B4 3 218 -74 1 1015 1053 38 105 0 chr17 56453131 56453264 -38819387 - B1_Mm SINE Alu 0 147 1 1 1015 716 114 171 0 chr17 56453277 56453400 -38819251 - B1_Mur4 SINE Alu -5 145 2 1 1015 653 164 121 10 chr17 56453401 56453581 -38819070 - B3 SINE B2 0 195 3 1 1015 563 264 42 42 chr17 56453587 56453777 -38818874 - B3A SINE B2 0 198 9 1 1015 231 304 126 10 chr17 56453800 56453903 -38818748 - PB1D9 SINE Alu -5 115 1 1 1015 804 169 0 0 chr17 56453972 56454102 -38818549 - B1_Mus2 SINE Alu -10 137 8 1 1015 221 114 22 22 chr17 56454126 56454171 -38818480 + T-rich Low_complexity Low_complexity 3 47 0 1 1015 344 245 151 0 chr17 56454171 56454277 -38818374 - RSINE1 SINE B4 -35 130 9 1 1015 186 71 0 0 chr17 56456165 56456193 -38816458 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1 1015 1275 21 7 0 chr17 56456193 56456338 -38816313 - B1_Mus2 SINE Alu 0 147 2 1 1015 956 187 64 0 chr17 56456693 56456880 -38815771 - B3 SINE B2 -17 199 1 1 1015 511 168 42 0 chr17 56457167 56457262 -38815389 - B3 SINE B2 -117 99 1 1 1015 456 117 26 13 chr17 56457948 56458026 -38814625 + PB1D10 SINE Alu 39 117 0 1 1015 326 232 60 24 chr17 56458107 56458191 -38814460 + ID_B1 SINE B4 133 219 -5 1 1015 532 232 58 106 chr17 56458208 56458396 -38814255 + B3 SINE B2 8 186 -9 1 1015 1150 75 0 0 chr17 56458490 56458636 -38814015 - B1_Mm SINE Alu 0 147 2 1 1015 1212 21 21 0 chr17 56458954 56459098 -38813553 + B1_Mus2 SINE Alu 1 147 0 1 1015 215 319 74 25 chr17 56459245 56459367 -38813284 - B1F SINE Alu -21 128 1 1 1015 343 302 51 8 chr17 56459265 56459382 -38813269 - ID_B1 SINE B4 -36 188 67 1 1015 236 322 158 0 chr17 56460096 56460248 -38812403 - L1MB3 LINE L1 -194 5989 5814 1 1015 390 21 0 0 chr17 56460263 56460310 -38812341 + (TATG)n Simple_repeat Simple_repeat 2 48 0 1 1015 1142 116 6 0 chr17 56460310 56460482 -38812169 - B2_Mm1a SINE B2 -20 173 1 1 1015 1220 49 0 0 chr17 56460498 56460641 -38812010 - B1_Mm SINE Alu 0 147 5 1 1015 943 143 36 17 chr17 56460753 56460941 -38811710 - ORR1A3 LTR MaLR -163 231 2 1 1015 192 40 0 0 chr17 56462152 56462177 -38810474 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 1 1015 23 0 0 0 chr17 56462633 56462656 -38809995 + AT_rich Low_complexity Low_complexity 1 23 0 1 1015 736 99 32 250 chr17 56462901 56463089 -38809562 + B1_Mus1 SINE Alu 2 148 0 1 1015 250 254 60 0 chr17 56463139 56463206 -38809445 - B1_Mus2 SINE Alu -66 81 11 1 1015 703 265 34 13 chr17 56463241 56463430 -38809221 - B3A SINE B2 -6 189 2 1 1015 1217 41 0 14 chr17 56463498 56463646 -38809005 + B1_Mm SINE Alu 2 147 0 1 1015 252 0 0 0 chr17 56463646 56463674 -38808977 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1015 210 247 145 24 chr17 56463872 56463955 -38808696 - RSINE1 SINE B4 0 165 73 1 1015 301 240 26 39 chr17 56464001 56464079 -38808572 - ID_B1 SINE B4 -11 213 137 1 1015 242 197 63 65 chr17 56464079 56464100 -38808551 - B1F1 SINE Alu -3 112 18 1 1015 29 28 0 0 chr17 56464475 56464511 -38808140 + AT_rich Low_complexity Low_complexity 1 36 0 1 1015 25 0 0 0 chr17 56465941 56465966 -38806685 + GC_rich Low_complexity Low_complexity 1 25 0 1 1015 1556 48 27 0 chr17 56468388 56468574 -38804077 - B2_Mm1a SINE B2 -1 192 2 1 1015 486 264 151 12 chr17 56469398 56469643 -38803008 + B4A SINE B4 3 281 -11 1 1015 333 267 152 40 chr17 56470316 56470441 -38802210 - B4 SINE B4 -152 140 2 1 1015 430 250 103 8 chr17 56470441 56470553 -38802098 - B4A SINE B4 -142 150 28 1 1015 268 274 0 0 chr17 56472006 56472068 -38800583 - RSINE1 SINE B4 -102 63 2 1 1015 766 193 0 7 chr17 56472226 56472367 -38800284 - B1_Mur4 SINE Alu 0 150 11 1 1015 455 206 215 40 chr17 56472385 56472575 -38800076 - B3 SINE B2 -20 196 8 1 1015 439 289 31 0 chr17 56472834 56472962 -38799689 + RSINE1 SINE B4 4 135 -30 1 1015 22 57 0 19 chr17 56472974 56472997 -38799654 + AT_rich Low_complexity Low_complexity 1 23 0 1 1015 1220 54 0 0 chr17 56472997 56473144 -38799507 + B1_Mus2 SINE Alu 1 147 0 1 1015 22 57 0 19 chr17 56473144 56473174 -38799477 + AT_rich Low_complexity Low_complexity 1 30 0 1 1015 230 227 320 0 chr17 56473749 56473846 -38798805 - RSINE1 SINE B4 -36 129 2 1 1015 554 332 51 35 chr17 56473857 56474113 -38798538 - B4A SINE B4 -4 288 29 1 1015 308 314 95 0 chr17 56474582 56474719 -38797932 - L1MB5 LINE L1 -287 5887 5738 1 1015 748 267 28 19 chr17 56474725 56474939 -38797712 - B3 SINE B2 0 216 1 1 1015 232 354 10 0 chr17 56475585 56475684 -38796967 + (TG)n Simple_repeat Simple_repeat 1 100 0 1 1015 279 0 0 0 chr17 56476223 56476254 -38796397 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1 1015 1204 48 7 0 chr17 56476408 56476553 -38796098 - B1_Mm SINE Alu 0 147 2 1 1015 999 156 0 0 chr17 56477690 56477869 -38794782 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 1 1015 1141 71 0 0 chr17 56478654 56478795 -38793856 + B1_Mus1 SINE Alu 1 141 -7 1 1015 194 0 39 0 chr17 56478799 56478825 -38793826 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1 1015 242 278 32 32 chr17 56478857 56478950 -38793701 - RSINE1 SINE B4 -2 163 71 1 1015 269 206 48 0 chr17 56479038 56479101 -38793550 - B3A SINE B2 -28 170 105 1 1015 513 0 0 0 chr17 56479192 56479249 -38793402 + (TTCC)n Simple_repeat Simple_repeat 4 60 0 1 1015 483 225 85 8 chr17 56479252 56479382 -38793269 - B1_Mur2 SINE Alu -8 141 2 1 1015 245 294 44 0 chr17 56479321 56479389 -38793262 - B4 SINE B4 -142 150 80 1 1015 363 255 37 9 chr17 56479399 56479506 -38793145 - PB1D9 SINE Alu 0 120 11 1 1015 312 198 405 0 chr17 56479605 56479716 -38792935 + RSINE1 SINE B4 4 159 -6 1 1015 2347 144 42 10 chr17 56481219 56481619 -38791032 - MTC LTR MaLR -8 413 1 1 1015 1403 75 43 0 chr17 56481661 56481847 -38790804 - B2_Mm2 SINE B2 -1 194 1 1 1015 330 299 164 0 chr17 56482036 56482237 -38790414 - L1M4 LINE L1 -1104 5042 4809 1 1015 234 81 0 0 chr17 56482268 56482305 -38790346 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 1 1015 1126 83 14 0 chr17 56482341 56482485 -38790166 - B1_Mus2 SINE Alu 0 147 2 1 1015 369 169 84 0 chr17 56482716 56482787 -38789864 - B3A SINE B2 -121 77 1 1 1015 232 250 83 0 chr17 56483362 56483422 -38789229 - ID_B1 SINE B4 0 224 160 1 1015 478 227 44 29 chr17 56483418 56483433 -38789218 - B1F SINE Alu -11 138 1 1 1015 494 273 16 0 chr17 56483433 56483554 -38789097 - ID_B1 SINE B4 -20 204 82 1 1015 380 275 80 94 chr17 56483907 56484120 -38788531 + B3 SINE B2 4 213 -3 1 1015 239 271 43 0 chr17 56484161 56484231 -38788420 - tRNA-Ala-GCY_ tRNA tRNA -1 74 2 1 1015 211 224 68 17 chr17 56484178 56484237 -38788414 - ID4_ SINE ID -21 62 1 1 1015 943 104 26 53 chr17 56485140 56485292 -38787359 - B1_Mus1 SINE Alu 0 148 1 1 1015 326 218 128 0 chr17 56485446 56485524 -38787127 - L1MB7 LINE L1 -58 6126 6039 1 1015 415 198 12 12 chr17 56485618 56485700 -38786951 - MTC LTR MaLR 0 421 340 1 1015 211 98 0 47 chr17 56485684 56485727 -38786924 - PB1D9 SINE Alu -66 54 14 1 1015 477 0 0 0 chr17 56485751 56485804 -38786847 + (TCCCC)n Simple_repeat Simple_repeat 4 56 0 1 1015 2223 158 13 20 chr17 56485804 56486199 -38786452 - Lx LINE L1 -3 6651 6260 1 1015 474 95 68 0 chr17 56486199 56486273 -38786378 - MTC LTR MaLR -342 79 1 1 1015 1204 181 214 10 chr17 56486502 56486815 -38785836 + ORR1C2 LTR MaLR 3 379 -5 1 1015 997 169 84 0 chr17 56487194 56487372 -38785279 + B2_Mm2 SINE B2 1 193 -2 1 1015 442 266 9 9 chr17 56489260 56489374 -38783277 + RSINE1 SINE B4 18 131 -34 1 1015 195 42 0 0 chr17 56490403 56490427 -38782224 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 126 277 225 11 11 chr17 56491953 56492043 -38780608 + (TG)n Simple_repeat Simple_repeat 2 91 0 1 1016 380 232 7 0 chr17 56492084 56492235 -38780416 + (TG)n Simple_repeat Simple_repeat 1 152 0 1 1016 396 0 0 0 chr17 56493382 56493426 -38779225 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1016 274 253 9 104 chr17 56493502 56493608 -38779043 - PB1D7 SINE Alu 0 120 25 1 1016 243 318 92 49 chr17 56493661 56493677 -38778974 - B2_Mm2 SINE B2 0 195 180 1 1016 1161 75 7 0 chr17 56493677 56493823 -38778828 - B1_Mus2 SINE Alu 0 147 1 1 1016 397 255 79 61 chr17 56493823 56493991 -38778660 - B3 SINE B2 -16 179 3 1 1016 551 278 67 22 chr17 56493991 56494151 -38778500 - B4A SINE B4 -58 234 67 1 1016 233 94 283 0 chr17 56496450 56496503 -38776148 - MTE2b LTR MaLR -2 377 310 1 1016 423 240 186 11 chr17 56496525 56496724 -38775927 - MTE2b LTR MaLR -122 257 15 1 1016 610 241 44 91 chr17 56497265 56497607 -38775044 - RMER17C LTR ERVK 0 410 85 1 1016 660 208 130 0 chr17 56497586 56497802 -38774849 - RMER17C LTR ERVK -166 244 1 1 1016 1976 162 192 0 chr17 56497802 56498228 -38774423 - RMER15 LTR ERVL -62 513 6 1 1016 265 224 32 8 chr17 56500478 56500604 -38772047 + CT-rich Low_complexity Low_complexity 6 134 0 1 1016 295 257 0 14 chr17 56500625 56500696 -38771955 + CT-rich Low_complexity Low_complexity 3 72 0 1 1016 708 148 381 0 chr17 56501366 56501521 -38771130 - B3 SINE B2 -1 215 2 2 1016 320 0 25 0 chr17 56502470 56502510 -38770141 + (TGGGGG)n Simple_repeat Simple_repeat 1 41 0 3 1016 212 170 0 19 chr17 56503927 56503952 -38768699 + polypyrimidine Low_complexity Low_complexity 30 54 0 4 1016 1280 34 0 0 chr17 56503952 56504098 -38768553 - B1_Mus1 SINE Alu 0 148 3 5 1016 212 170 0 19 chr17 56504098 56504126 -38768525 + polypyrimidine Low_complexity Low_complexity 2 29 0 6 1016 653 241 7 14 chr17 56504131 56504270 -38768381 - B1_Mur4 SINE Alu -2 148 11 7 1016 329 248 18 114 chr17 56504177 56504291 -38768360 - MT2B LTR ERVL -347 254 152 8 1016 710 219 20 33 chr17 56509174 56509325 -38763326 - B1F1 SINE Alu 0 149 1 9 1016 442 271 130 38 chr17 56509759 56509943 -38762708 - MLT1D LTR MaLR -286 219 19 1 1016 799 191 14 14 chr17 56510253 56510396 -38762255 + B1_Mur1 SINE Alu 5 147 -2 1 1016 309 238 54 100 chr17 56514681 56514811 -38757840 - PB1D10 SINE Alu -13 137 9 1 1016 451 209 122 19 chr17 56514833 56514940 -38757711 - PB1D9 SINE Alu -2 118 1 1 1016 559 295 44 19 chr17 56514961 56515120 -38757531 - RSINE1 SINE B4 0 165 3 1 1016 331 173 149 69 chr17 56517890 56517977 -38754674 + ID_B1 SINE B4 131 224 0 1 1016 444 259 71 0 chr17 56518065 56518177 -38754474 + PB1D7 SINE Alu 1 120 0 1 1016 344 268 0 0 chr17 56520135 56520206 -38752445 + B1F SINE Alu 13 83 -66 1 1016 1242 55 0 0 chr17 56523001 56523147 -38749504 + B1_Mus2 SINE Alu 2 147 0 1 1016 943 145 0 11 chr17 56523147 56523321 -38749330 + GA-rich Low_complexity Low_complexity 1 172 0 1 1016 310 47 47 0 chr17 56523321 56523364 -38749287 + (GAAAA)n Simple_repeat Simple_repeat 5 49 0 2 1016 1239 61 0 0 chr17 56526225 56526372 -38746279 + B1_Mm SINE Alu 1 147 0 2 1016 213 39 0 0 chr17 56526372 56526398 -38746253 + (A)n Simple_repeat Simple_repeat 1 26 0 2 1016 247 331 134 0 chr17 56530070 56530176 -38742475 - MLT1D LTR MaLR -382 123 2 2 1016 261 83 0 0 chr17 56533593 56533629 -38739022 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1016 401 155 18 18 chr17 56533845 56533957 -38738694 + (TG)n Simple_repeat Simple_repeat 2 113 0 2 1016 301 27 0 0 chr17 56534005 56534042 -38738609 - HAL1-3A_ME LINE L1 -847 2011 1975 2 1016 303 92 30 15 chr17 56537095 56537161 -38735490 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 1016 392 297 85 61 chr17 56537244 56537409 -38735242 - B4 SINE B4 -123 169 1 2 1016 242 261 19 47 chr17 56537867 56537953 -38734698 + MIRm SINE MIR 44 138 -138 2 1016 1194 62 0 0 chr17 56542824 56542970 -38729681 + B1_Mm SINE Alu 2 147 0 3 1016 1106 55 148 68 chr17 56543967 56544143 -38728508 + B2_Mm2 SINE B2 5 194 -1 3 1016 2415 168 64 0 chr17 56544418 56544811 -38727840 - MTC LTR MaLR -2 419 2 3 1016 314 250 14 0 chr17 56544951 56545023 -38727628 - ID_B1 SINE B4 -67 157 85 3 1016 428 318 45 32 chr17 56545042 56545198 -38727453 + B4 SINE B4 64 221 -71 3 1016 723 177 77 0 chr17 56545072 56545202 -38727449 + B1_Mur4 SINE Alu 10 149 -1 3 1016 3937 154 112 47 chr17 56546270 56547121 -38725530 + RMER17A2 LTR ERVK 1 906 0 3 1016 618 280 92 15 chr17 56547243 56547439 -38725212 + B4A SINE B4 82 292 0 3 1016 889 116 43 0 chr17 56547508 56547646 -38725005 + B1_Mus2 SINE Alu 4 147 0 3 1016 485 167 230 22 chr17 56547979 56548114 -38724537 - ZP3AR Satellite Satellite -48 164 2 3 1016 256 164 68 0 chr17 56549339 56549412 -38723239 - ZP3AR Satellite Satellite -88 124 47 4 1016 392 51 17 0 chr17 56549831 56549890 -38722761 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 1016 311 105 18 0 chr17 56549942 56549999 -38722652 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 1016 432 0 0 0 chr17 56550051 56550099 -38722552 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1016 379 261 74 27 chr17 56550157 56550322 -38722329 - B3A SINE B2 -4 191 33 4 1016 246 288 74 12 chr17 56551030 56551111 -38721540 + B1F2 SINE Alu 1 86 -63 4 1016 255 179 0 0 chr17 56552419 56552486 -38720165 + A-rich Low_complexity Low_complexity 1 67 0 4 1016 478 304 61 35 chr17 56554661 56554859 -38717792 - B3 SINE B2 -13 203 1 4 1016 251 226 48 16 chr17 56554947 56555010 -38717641 + ID2 SINE ID 5 69 -14 4 1016 2218 161 88 22 chr17 56555010 56555467 -38717184 + RLTR11A LTR ERVK 6 492 -36 4 1016 1238 253 74 11 chr17 56555529 56555881 -38716770 + ORR1D1 LTR MaLR 1 374 0 4 1016 265 322 73 16 chr17 56555881 56556002 -38716649 + B4 SINE B4 165 292 0 4 1016 260 254 42 0 chr17 56556123 56556194 -38716457 + ID2 SINE ID 2 75 -8 5 1016 252 0 0 0 chr17 56556247 56556275 -38716376 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 1016 300 192 45 124 chr17 56556571 56556660 -38715991 - RSINE1 SINE B4 -29 136 55 5 1016 244 282 45 45 chr17 56559446 56559624 -38713027 + (CGTG)n Simple_repeat Simple_repeat 1 178 0 5 1016 206 355 0 29 chr17 56559548 56559719 -38712932 + (TG)n Simple_repeat Simple_repeat 1 166 0 5 1016 196 290 117 29 chr17 56559759 56559862 -38712789 + L2 LINE L2 1236 1347 -2072 5 1016 28 0 0 0 chr17 56564718 56564746 -38707905 + GC_rich Low_complexity Low_complexity 1 28 0 5 1016 240 286 17 67 chr17 56565339 56565459 -38707192 - ZP3AR Satellite Satellite -57 155 42 5 1016 297 282 112 11 chr17 56566175 56566354 -38706297 + L2 LINE L2 2846 3042 -377 5 1016 312 91 0 0 chr17 56566791 56566835 -38705816 + (CACG)n Simple_repeat Simple_repeat 2 45 0 5 1016 197 259 48 48 chr17 56567734 56567822 -38704829 - MIR SINE MIR -93 183 90 6 1016 543 178 0 37 chr17 56569731 56569757 -38702894 - BC1_Mm scRNA scRNA -18 134 109 6 1016 1548 22 55 0 chr17 56569757 56569940 -38702711 - B2_Mm1a SINE B2 0 193 1 6 1016 543 178 0 37 chr17 56569940 56570047 -38702604 - BC1_Mm scRNA scRNA -44 108 6 6 1016 211 0 0 0 chr17 56570171 56570196 -38702455 - L2b LINE L2 -22 3353 3329 6 1016 191 188 0 0 chr17 56570222 56570254 -38702397 - MIRm SINE MIR -23 253 222 6 1016 223 288 34 0 chr17 56570673 56570732 -38701919 - MIRb SINE MIR -2 266 206 6 1016 196 308 0 19 chr17 56571022 56571075 -38701576 - MIRm SINE MIR -17 259 208 6 1016 206 200 0 0 chr17 56571387 56571427 -38701224 - L2b LINE L2 -9 3366 3327 6 1016 260 239 34 68 chr17 56574048 56574165 -38698486 + (CAGAGA)n Simple_repeat Simple_repeat 5 117 0 6 1016 302 297 30 0 chr17 56574705 56574806 -38697845 - PB1D9 SINE Alu -2 118 15 6 1016 398 188 0 0 chr17 56575871 56575935 -38696716 - ID_B1 SINE B4 -15 209 146 7 1016 245 303 40 0 chr17 56575935 56575947 -38696704 - B1_Mus2 SINE Alu -15 132 54 7 1016 348 340 0 0 chr17 56575964 56576067 -38696584 + PB1D10 SINE Alu 1 103 -14 7 1016 427 250 46 9 chr17 56576747 56576856 -38695795 - PB1D10 SINE Alu -34 115 3 7 1016 1153 197 9 9 chr17 56576879 56577104 -38695547 - URR1B DNA MER1_type 0 225 1 7 1016 180 0 0 0 chr17 56577633 56577653 -38694998 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1016 440 158 11 0 chr17 56578209 56578304 -38694347 + GA-rich Low_complexity Low_complexity 2 97 0 7 1016 300 252 0 57 chr17 56578337 56578442 -38694209 + GA-rich Low_complexity Low_complexity 1 99 0 7 1016 342 188 16 62 chr17 56580107 56580215 -38692436 - PB1D7 SINE Alu -6 143 47 7 1016 180 0 0 0 chr17 56582896 56582916 -38689735 + (TCTG)n Simple_repeat Simple_repeat 4 23 0 7 1016 540 0 0 0 chr17 56583904 56583964 -38688687 + (GA)n Simple_repeat Simple_repeat 1 60 0 7 1016 326 346 8 38 chr17 56584751 56584883 -38687768 + L1MEf LINE L1 1935 2062 -4138 8 1016 23 0 0 0 chr17 56585464 56585487 -38687164 + AT_rich Low_complexity Low_complexity 1 23 0 8 1016 555 203 16 33 chr17 56589072 56589194 -38683457 - B1_Mur2 SINE Alu -28 121 2 8 1016 229 342 44 18 chr17 56593082 56593195 -38679456 - MIRb SINE MIR -132 136 21 8 1016 498 291 45 19 chr17 56594690 56594844 -38677807 + RSINE1 SINE B4 2 159 -6 8 1016 259 235 226 63 chr17 56596995 56597154 -38675497 - B2_Mm2 SINE B2 -10 185 1 8 1016 434 180 0 43 chr17 56597193 56597286 -38675365 - PB1D9 SINE Alu 0 120 32 8 1016 445 211 39 0 chr17 56597971 56598075 -38674576 - ID_B1 SINE B4 -6 218 111 8 1016 184 222 111 0 chr17 56599855 56599900 -38672751 - MIRb SINE MIR -99 169 120 8 1016 350 272 40 38 chr17 56603310 56603456 -38669195 - L2a LINE L2 -274 3101 2953 8 1016 185 259 74 0 chr17 56603939 56603993 -38668658 - MIRm SINE MIR -10 266 209 9 1016 190 109 21 42 chr17 56604579 56604627 -38668024 + CT-rich Low_complexity Low_complexity 4 50 0 9 1016 271 175 29 73 chr17 56605125 56605193 -38667458 - B1_Mur4 SINE Alu -64 86 22 9 1016 1676 89 8 0 chr17 56605196 56605442 -38667209 - Lx3A LINE L1 -446 6535 6288 9 1016 1724 142 4 4 chr17 56605442 56605718 -38666933 + Lx3A LINE L1 6704 6979 -2 9 1016 449 218 40 0 chr17 56605991 56606092 -38666559 + PB1D7 SINE Alu 11 115 -5 9 1016 297 0 0 0 chr17 56606093 56606126 -38666525 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 9 1016 255 275 104 38 chr17 56606319 56606425 -38666226 + B4 SINE B4 113 225 -67 9 1016 478 170 5 145 chr17 56606599 56606866 -38665785 + G-rich Low_complexity Low_complexity 1 229 0 9 1016 210 71 0 0 chr17 56607039 56607067 -38665584 + (TCCC)n Simple_repeat Simple_repeat 1 28 0 9 1016 190 230 7 82 chr17 56607560 56607645 -38665006 + MIR SINE MIR 46 141 -67 1 1016 228 342 44 18 chr17 56607820 56607933 -38664718 + MTEa LTR MaLR 80 195 -184 1 1016 311 195 184 0 chr17 56607994 56608081 -38664570 - B3A SINE B2 -38 178 76 1 1016 185 178 0 22 chr17 56608763 56608809 -38663842 + GA-rich Low_complexity Low_complexity 1 45 0 1 1016 182 302 82 49 chr17 56609027 56609149 -38663502 + MIRc SINE MIR 3 128 -140 1 1016 311 291 19 32 chr17 56609600 56609756 -38662895 + G-rich Low_complexity Low_complexity 4 157 0 1 1016 187 292 46 0 chr17 56610352 56610417 -38662234 - MIR SINE MIR -118 144 77 1 1016 183 267 0 0 chr17 56610655 56610700 -38661951 + MIR SINE MIR 74 118 -144 1 1016 503 126 9 120 chr17 56611081 56611189 -38661462 - ID_B1 SINE B4 -24 200 105 1 1016 249 257 53 98 chr17 56611882 56612027 -38660624 - MIR SINE MIR -89 173 38 1 1016 267 219 82 0 chr17 56616215 56616288 -38656363 + B1F SINE Alu 37 115 -34 1 1016 21 0 0 0 chr17 56616308 56616329 -38656322 + AT_rich Low_complexity Low_complexity 1 21 0 1 1016 457 286 71 8 chr17 56616337 56616464 -38656187 + RSINE1 SINE B4 2 136 -29 1 1016 235 316 13 0 chr17 56616576 56616652 -38655999 + PB1D7 SINE Alu 43 119 -1 1 1016 180 245 35 113 chr17 56617425 56617540 -38655111 + L2b LINE L2 2960 3065 -310 1 1016 580 111 10 10 chr17 56618184 56618284 -38654367 + (TTTC)n Simple_repeat Simple_repeat 1 100 0 1 1016 270 351 0 0 chr17 56618362 56618439 -38654212 + ID_B1 SINE B4 120 196 -28 1 1016 665 138 46 3 chr17 56620328 56620469 -38652182 + B1_Mm SINE Alu 5 150 0 1 1016 422 291 8 23 chr17 56621244 56621374 -38651277 - B1F1 SINE Alu -21 128 1 1 1016 264 319 58 33 chr17 56621267 56621387 -38651264 - ID_B1 SINE B4 -37 187 65 1 1016 211 308 43 123 chr17 56621449 56621612 -38651039 + B4 SINE B4 71 220 -72 1 1016 508 277 15 0 chr17 56621488 56621618 -38651033 + B1F2 SINE Alu 18 149 0 1 1016 887 170 0 7 chr17 56621649 56621797 -38650854 + B1_Mus2 SINE Alu 1 147 0 1 1016 201 268 69 58 chr17 56621987 56622074 -38650577 + MIRm SINE MIR 64 151 -125 1 15 1071 156 0 7 chr17 56623078 56623362 -38649289 + (TGGA)n Simple_repeat Simple_repeat 1 281 0 1 1017 498 169 0 0 chr17 56623830 56623948 -38648703 + (CTGGGG)n Simple_repeat Simple_repeat 5 122 0 1 1017 610 332 73 0 chr17 56623948 56624207 -38648444 + B4A SINE B4 1 278 -14 1 1017 231 185 0 36 chr17 56624454 56624510 -38648141 + B1F SINE Alu 89 142 -7 1 1017 459 0 0 0 chr17 56624616 56624667 -38647984 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 1017 208 93 0 65 chr17 56624679 56624725 -38647926 + C-rich Low_complexity Low_complexity 5 47 0 1 1017 325 109 55 0 chr17 56625961 56626016 -38646635 - B1_Mur1 SINE Alu -43 106 49 1 1017 270 259 0 17 chr17 56625963 56626022 -38646629 - MT2B LTR ERVL -344 257 200 1 1017 410 288 39 13 chr17 56626050 56626205 -38646446 - B4A SINE B4 -129 163 5 1 1017 237 146 0 0 chr17 56627109 56627157 -38645494 + (C)n Simple_repeat Simple_repeat 1 48 0 1 1017 256 227 67 0 chr17 56627309 56627384 -38645267 - PB1D10 SINE Alu -6 111 32 1 1017 445 183 151 19 chr17 56628128 56628234 -38644417 + PB1D9 SINE Alu 1 120 0 1 1017 359 304 8 34 chr17 56628696 56628815 -38643836 + B3A SINE B2 1 116 -82 1 1017 1181 120 46 0 chr17 56628860 56629035 -38643616 + B2_Mm2 SINE B2 2 184 -11 1 1017 226 314 45 34 chr17 56629172 56629261 -38643390 - PB1D7 SINE Alu -10 110 21 1 1017 239 306 0 0 chr17 56630180 56630242 -38642409 - MIR SINE MIR -98 164 103 1 1017 416 249 5 23 chr17 56630879 56631325 -38641326 + G-rich Low_complexity Low_complexity 1 437 0 1 1017 250 43 87 0 chr17 56632281 56632327 -38640324 + (TCTG)n Simple_repeat Simple_repeat 3 52 0 1 1017 22 0 0 0 chr17 56632637 56632659 -38639992 + AT_rich Low_complexity Low_complexity 1 22 0 1 1017 592 278 128 25 chr17 56633018 56633214 -38639437 + ID_B1 SINE B4 2 217 -7 1 1017 665 289 171 81 chr17 56634070 56634526 -38638125 - MLT1D LTR MaLR 0 505 9 1 1017 432 0 0 0 chr17 56634819 56634867 -38637784 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 1 1017 459 0 0 0 chr17 56634867 56634917 -38637734 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1017 1086 76 0 0 chr17 56634920 56635065 -38637586 - B2_Mm2 SINE B2 -48 147 3 1 1017 285 29 0 0 chr17 56635411 56635445 -38637206 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1017 2668 229 73 73 chr17 56635456 56636295 -38636356 + RMER17B LTR ERVK 1 839 -119 1 1017 497 259 43 54 chr17 56636284 56636468 -38636183 + RMER13B LTR ERVK 718 899 -9 1 1017 290 250 49 12 chr17 56636505 56636586 -38636065 + B1_Mur4 SINE Alu 16 99 -51 1 1017 244 310 62 0 chr17 56636739 56636868 -38635783 - L1MD LINE L1 -705 5537 5401 1 1017 251 333 24 0 chr17 56637019 56637103 -38635548 - RSINE1 SINE B4 -69 96 11 1 1017 828 174 0 0 chr17 56637125 56637280 -38635371 + CT-rich Low_complexity Low_complexity 2 156 0 1 1017 689 44 0 0 chr17 56637286 56637377 -38635274 - B1_Mus1 SINE Alu -56 92 2 1 1017 350 176 21 86 chr17 56637294 56637387 -38635264 - MT2B LTR ERVL -361 240 154 1 1017 519 229 18 27 chr17 56637396 56637508 -38635143 - PB1D10 SINE Alu -4 113 3 1 1017 295 250 44 80 chr17 56638328 56638441 -38634210 - PB1D10 SINE Alu 0 117 9 1 1017 313 243 14 0 chr17 56638535 56638609 -38634042 + ID_B1 SINE B4 98 172 -52 1 1017 290 259 12 0 chr17 56639119 56639200 -38633451 - MIRc SINE MIR -123 145 64 1 1017 310 311 58 10 chr17 56639426 56639530 -38633121 - PB1D10 SINE Alu -2 115 7 1 1017 642 198 17 0 chr17 56639877 56640054 -38632597 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 1 1017 433 267 0 9 chr17 56640953 56641513 -38631138 + CT-rich Low_complexity Low_complexity 1 554 0 1 1017 571 216 43 0 chr17 56642210 56642349 -38630302 - B3A SINE B2 -15 183 39 1 1017 694 167 8 0 chr17 56642344 56642464 -38630187 + B1_Mus1 SINE Alu 5 125 -23 1 1017 1131 75 7 0 chr17 56642746 56642892 -38629759 + B1_Mm SINE Alu 1 147 0 1 1017 297 68 0 0 chr17 56642897 56642941 -38629710 + (A)n Simple_repeat Simple_repeat 1 44 0 1 1017 1112 181 28 5 chr17 56643197 56643414 -38629237 + URR1B DNA MER1_type 1 222 -3 1 1017 423 315 77 30 chr17 56643435 56643734 -38628917 + L1MB3 LINE L1 5581 5897 -281 1 1017 1640 178 97 3 chr17 56643750 56644089 -38628562 + ORR1C1 LTR MaLR 8 378 0 1 1017 318 267 13 0 chr17 56644226 56644301 -38628350 + PB1D10 SINE Alu 34 109 -8 1 1017 653 220 185 0 chr17 56644313 56644486 -38628165 + B3 SINE B2 4 208 -8 1 1017 995 96 43 0 chr17 56644516 56644704 -38627947 + ZP3AR Satellite Satellite 1 196 -16 1 1017 399 155 0 0 chr17 56645238 56645322 -38627329 + (ATG)n Simple_repeat Simple_repeat 1 84 0 1 1017 304 227 113 0 chr17 56645900 56645997 -38626654 + B4A SINE B4 119 226 -66 1 1017 378 0 0 0 chr17 56646478 56646520 -38626131 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1017 180 0 0 0 chr17 56646520 56646539 -38626112 + (CG)n Simple_repeat Simple_repeat 2 21 0 1 1017 293 270 17 45 chr17 56647339 56647459 -38625192 - PB1D10 SINE Alu -25 124 7 1 1017 467 209 78 0 chr17 56647710 56647825 -38624826 - RSINE1 SINE B4 -39 126 3 1 1017 343 330 4 0 chr17 56647896 56648003 -38624648 - B1F SINE Alu 0 120 12 1 1017 480 18 0 0 chr17 56648198 56648255 -38624396 + (TTCC)n Simple_repeat Simple_repeat 1 57 0 1 1017 399 224 32 79 chr17 56648274 56648400 -38624251 - PB1D9 SINE Alu 0 120 1 1 1017 198 0 0 0 chr17 56648410 56648432 -38624219 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1 1017 236 294 24 0 chr17 56648433 56648518 -38624133 - ID_B1 SINE B4 -3 221 135 1 1017 201 39 0 0 chr17 56648750 56648776 -38623875 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1017 213 39 0 0 chr17 56648848 56648874 -38623777 + (GGGA)n Simple_repeat Simple_repeat 4 29 0 1 1017 204 224 13 130 chr17 56648947 56649024 -38623627 + L2b LINE L2 3288 3355 -20 1 1017 288 299 0 0 chr17 56649365 56649452 -38623199 + G-rich Low_complexity Low_complexity 2 88 0 1 1017 250 254 15 29 chr17 56650235 56650336 -38622315 - MIRc SINE MIR -55 207 106 1 1017 725 111 17 0 chr17 56652899 56653016 -38619635 + (TTTC)n Simple_repeat Simple_repeat 2 120 0 1 1017 316 195 84 50 chr17 56653017 56653041 -38619610 - B1_Mur4 SINE Alu 0 150 118 1 1017 1212 68 0 0 chr17 56653041 56653188 -38619463 - B1_Mus2 SINE Alu 0 147 1 1 1017 511 172 1 1 chr17 56653188 56653282 -38619369 - PB1D9 SINE Alu -1 119 27 1 1017 227 186 67 17 chr17 56653415 56653475 -38619176 - MT2B2 LTR ERVL -326 258 196 1 1017 216 0 0 0 chr17 56653715 56653739 -38618912 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 1 1017 255 218 286 50 chr17 56653982 56654017 -38618634 + ID_B1 SINE B4 50 222 -2 1 1017 394 260 0 0 chr17 56654017 56654122 -38618529 + PB1D7 SINE Alu 11 115 -5 1 1017 504 259 63 22 chr17 56654352 56654536 -38618115 - MLT1F2 LTR MaLR -347 201 20 1 1017 246 321 12 0 chr17 56655029 56655110 -38617541 + PB1D10 SINE Alu 1 82 -35 1 1017 360 151 46 11 chr17 56655288 56655375 -38617276 - ZP3AR Satellite Satellite -85 127 38 1 1017 242 326 80 15 chr17 56656334 56656471 -38616180 + MLT1I LTR MaLR 259 404 -7 2 1017 368 324 19 0 chr17 56656536 56656644 -38616007 - PB1D10 SINE Alu 0 117 8 2 1017 718 326 14 74 chr17 56657258 56657543 -38615108 + B4A SINE B4 2 269 -23 2 1017 324 0 0 0 chr17 56657954 56657990 -38614661 + (TATG)n Simple_repeat Simple_repeat 4 39 0 2 1017 296 361 61 8 chr17 56658011 56658142 -38614509 - RMER13A LTR ERVK -25 835 698 2 1017 1457 199 65 26 chr17 56658279 56658620 -38614031 - RMER13A LTR ERVK -506 354 1 2 1017 329 343 0 0 chr17 56658632 56658737 -38613914 + (TGGG)n Simple_repeat Simple_repeat 4 108 0 2 1017 1169 75 7 0 chr17 56658740 56658886 -38613765 + B1_Mm SINE Alu 1 147 0 2 1017 221 91 60 15 chr17 56658886 56658953 -38613698 + A-rich Low_complexity Low_complexity 1 70 0 2 1017 313 248 0 20 chr17 56658985 56659091 -38613560 + (TGGA)n Simple_repeat Simple_repeat 3 106 0 2 1017 2278 159 27 22 chr17 56659091 56659496 -38613155 - MTB_Mm LTR MaLR 0 407 1 2 1017 313 248 0 20 chr17 56659496 56659541 -38613110 + (TGGA)n Simple_repeat Simple_repeat 3 47 0 2 1017 323 279 0 7 chr17 56659562 56659717 -38612934 + (TGGG)n Simple_repeat Simple_repeat 3 156 0 2 1017 524 251 11 0 chr17 56659723 56659987 -38612664 + (TGGA)n Simple_repeat Simple_repeat 1 267 0 2 1017 398 283 4 0 chr17 56660003 56660257 -38612394 + (TGGA)n Simple_repeat Simple_repeat 1 255 0 2 1017 274 264 7 7 chr17 56660287 56660432 -38612219 + (TGGA)n Simple_repeat Simple_repeat 3 147 0 2 1017 391 243 18 0 chr17 56660492 56660768 -38611883 + (TGGA)n Simple_repeat Simple_repeat 1 281 0 2 1017 309 326 14 0 chr17 56660772 56660913 -38611738 + (TGAA)n Simple_repeat Simple_repeat 1 143 0 2 1017 380 221 9 0 chr17 56660930 56661043 -38611608 + (TGGA)n Simple_repeat Simple_repeat 1 114 0 2 1017 711 281 41 60 chr17 56661047 56661316 -38611335 + RLTR17 LTR ERVK 92 355 -337 2 1017 354 261 116 29 chr17 56661324 56661462 -38611189 + RLTR17 LTR ERVK 470 619 -73 2 1017 582 230 0 0 chr17 56661518 56661692 -38610959 + (TGGA)n Simple_repeat Simple_repeat 1 174 0 2 1017 183 184 0 0 chr17 56661693 56661731 -38610920 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 2 1017 311 319 17 8 chr17 56661765 56661885 -38610766 + (TGGA)n Simple_repeat Simple_repeat 1 121 0 2 1017 4131 102 17 26 chr17 56661885 56661897 -38610754 - RMER19A LTR ERVK 0 737 726 2 1017 954 144 108 0 chr17 56661897 56662064 -38610587 - B2_Mm2 SINE B2 -8 187 3 2 1017 4131 102 17 26 chr17 56662064 56662693 -38609958 - RMER19A LTR ERVK -12 725 103 2 1017 1169 82 0 0 chr17 56662693 56662840 -38609811 + B1_Mus1 SINE Alu 2 148 0 2 1017 470 94 30 40 chr17 56662840 56662896 -38609755 + A-rich Low_complexity Low_complexity 3 59 0 2 1017 1544 57 10 0 chr17 56662896 56663133 -38609518 + L1_Mus1 LINE L1 6371 6567 0 2 1017 614 149 9 0 chr17 56663133 56663247 -38609404 - RMER19A LTR ERVK -622 115 1 2 1017 286 292 0 11 chr17 56663250 56663430 -38609221 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 2 1017 311 349 6 38 chr17 56663438 56663521 -38609130 + (TGGG)n Simple_repeat Simple_repeat 3 80 0 2 1017 389 115 13 0 chr17 56663521 56663599 -38609052 + (TATG)n Simple_repeat Simple_repeat 1 79 0 2 1017 311 349 6 38 chr17 56663599 56663673 -38608978 + (TGGG)n Simple_repeat Simple_repeat 4 78 0 2 1017 589 215 0 22 chr17 56663674 56663855 -38608796 + (TGGA)n Simple_repeat Simple_repeat 3 179 0 2 1017 2633 221 53 52 chr17 56664873 56665022 -38607629 - RLTR21 LTR ERVK 0 1572 1406 2 1017 261 0 0 0 chr17 56665022 56665051 -38607600 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1017 2633 221 53 52 chr17 56665051 56665196 -38607455 - RLTR21 LTR ERVK -167 1405 1272 2 1017 594 109 0 0 chr17 56665196 56665288 -38607363 + (CATA)n Simple_repeat Simple_repeat 3 94 0 2 1017 2633 221 53 52 chr17 56665288 56665331 -38607320 - RLTR21 LTR ERVK -301 1271 1232 2 1017 180 77 0 0 chr17 56665331 56665357 -38607294 + (CATA)n Simple_repeat Simple_repeat 3 28 0 2 1017 2633 221 53 52 chr17 56665357 56665890 -38606761 - RLTR21 LTR ERVK -341 1231 700 2 1017 499 45 0 0 chr17 56665889 56665949 -38606702 + B1_Mur4 SINE Alu 75 141 -9 2 1017 210 37 0 0 chr17 56665956 56665983 -38606668 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1017 285 170 19 122 chr17 56665983 56666082 -38606569 - RLTR21 LTR ERVK -870 702 615 2 1017 261 0 0 0 chr17 56666086 56666115 -38606536 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 1017 1125 51 0 7 chr17 56666115 56666253 -38606398 - B1_Mm SINE Alu -10 137 1 2 1017 14097 83 17 3 chr17 56666259 56667949 -38604702 - L1_Mus3 LINE L1 -4 6634 4923 2 1017 1104 55 7 0 chr17 56667949 56668094 -38604557 + B1_Mm SINE Alu 2 147 0 2 1017 14097 128 33 7 chr17 56668094 56669494 -38603157 - L1_Mus3 LINE L1 -961 4922 3489 2 1017 299 25 0 24 chr17 56669494 56669535 -38603116 + (TTG)n Simple_repeat Simple_repeat 3 42 0 2 1017 14097 128 33 7 chr17 56669535 56669568 -38603083 - L1_Mus3 LINE L1 -2395 3488 3445 2 1017 405 181 0 0 chr17 56669569 56669641 -38603010 + PB1D7 SINE Alu 48 119 -1 2 1017 1888 164 19 3 chr17 56669690 56670009 -38602642 - RLTR21 LTR ERVK -1248 324 1 2 1017 296 285 9 0 chr17 56670009 56670360 -38602291 + (TGGA)n Simple_repeat Simple_repeat 1 354 0 2 1017 613 195 18 0 chr17 56670372 56670541 -38602110 + (TGGA)n Simple_repeat Simple_repeat 3 174 0 2 1017 196 242 0 21 chr17 56670526 56670623 -38602028 + (TGAA)n Simple_repeat Simple_repeat 4 98 0 2 1017 567 237 0 0 chr17 56670656 56670833 -38601818 + (TGGA)n Simple_repeat Simple_repeat 1 177 0 2 1017 226 347 16 8 chr17 56670888 56671010 -38601641 + (TGGA)n Simple_repeat Simple_repeat 1 123 0 2 1017 230 263 0 10 chr17 56671033 56671129 -38601522 + (TGGA)n Simple_repeat Simple_repeat 3 97 0 2 1017 1643 219 131 72 chr17 56671133 56671388 -38601263 - RMER19C LTR ERVK -12 599 305 2 1017 225 0 0 0 chr17 56671388 56671413 -38601238 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2 1017 1643 219 131 72 chr17 56671413 56671723 -38600928 - RMER19C LTR ERVK -307 304 2 2 1017 371 250 7 0 chr17 56671723 56671871 -38600780 + (TGGA)n Simple_repeat Simple_repeat 1 149 0 2 1017 427 244 12 0 chr17 56671989 56672157 -38600494 + (TGGA)n Simple_repeat Simple_repeat 1 170 0 2 1017 398 333 11 0 chr17 56672197 56672374 -38600277 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 2 1017 525 231 4 0 chr17 56672385 56672669 -38599982 + (TGGA)n Simple_repeat Simple_repeat 1 285 0 2 1017 460 266 19 3 chr17 56672683 56673003 -38599648 + (TGGA)n Simple_repeat Simple_repeat 1 325 0 2 1017 324 330 0 0 chr17 56673013 56673107 -38599544 + (TGGG)n Simple_repeat Simple_repeat 4 97 0 2 1017 484 259 0 11 chr17 56673110 56673294 -38599357 + (TGGA)n Simple_repeat Simple_repeat 1 182 0 2 1017 198 0 0 0 chr17 56673294 56673316 -38599335 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 2 1017 484 311 11 6 chr17 56673316 56673486 -38599165 + (TGGA)n Simple_repeat Simple_repeat 4 175 0 2 1017 344 256 16 4 chr17 56673519 56673775 -38598876 + (TGGA)n Simple_repeat Simple_repeat 1 259 0 2 1017 716 177 12 0 chr17 56673798 56673962 -38598689 + (TGGA)n Simple_repeat Simple_repeat 2 167 0 2 1017 473 222 11 11 chr17 56674013 56674191 -38598460 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 2 1017 180 294 0 0 chr17 56674180 56674265 -38598386 + (TGGG)n Simple_repeat Simple_repeat 3 87 0 2 1017 318 277 8 11 chr17 56674298 56674564 -38598087 + (TGGA)n Simple_repeat Simple_repeat 1 264 0 2 1017 270 280 0 0 chr17 56674622 56674747 -38597904 + (TGGG)n Simple_repeat Simple_repeat 4 128 0 2 1017 236 290 0 46 chr17 56676256 56676321 -38596330 - MIRm SINE MIR 0 276 215 2 1017 186 43 0 0 chr17 56676902 56676925 -38595726 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2 1017 970 108 0 20 chr17 56676925 56677067 -38595584 - B1_Mur4 SINE Alu -9 141 2 2 1017 209 296 0 0 chr17 56677290 56677344 -38595307 + MIRc SINE MIR 90 143 -125 2 1017 414 256 0 0 chr17 56678033 56678119 -38594532 + ID_B1 SINE B4 131 216 -8 2 1017 271 154 58 0 chr17 56678074 56678126 -38594525 + PB1D7 SINE Alu 65 119 -1 2 1017 346 316 0 68 chr17 56678668 56678831 -38593820 + MLT1F LTR MaLR 335 486 -62 2 1017 324 282 81 37 chr17 56678976 56679112 -38593539 + B3A SINE B2 57 198 0 2 1017 687 223 58 11 chr17 56680003 56680062 -38592589 + ZP3AR Satellite Satellite 1 61 -127 2 1017 378 0 0 0 chr17 56680062 56680104 -38592547 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1017 813 193 32 13 chr17 56680104 56680383 -38592268 + ZP3AR Satellite Satellite 1 284 -1 2 1017 320 180 22 33 chr17 56681351 56681449 -38591202 - B4 SINE B4 -194 98 1 2 1017 438 69 0 0 chr17 56682039 56682097 -38590554 + (CCTG)n Simple_repeat Simple_repeat 2 59 0 2 1017 202 114 68 0 chr17 56682183 56682227 -38590424 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 2 1017 233 183 17 0 chr17 56682915 56682975 -38589676 + (CCCA)n Simple_repeat Simple_repeat 4 64 0 2 1017 339 145 32 0 chr17 56683862 56683924 -38588727 - L2a LINE L2 -335 3091 3028 2 1017 295 172 17 0 chr17 56683950 56684008 -38588643 - ZP3AR Satellite Satellite -145 67 9 2 1017 207 88 0 0 chr17 56684177 56684211 -38588440 + (CATG)n Simple_repeat Simple_repeat 2 35 0 2 1017 483 160 29 39 chr17 56684706 56684810 -38587841 + PB1D10 SINE Alu 14 116 -1 2 1017 240 247 99 0 chr17 56684955 56684972 -38587679 + B1F SINE Alu 52 140 -9 2 1017 290 250 0 0 chr17 56684972 56685036 -38587615 + ID_B1 SINE B4 152 215 -9 2 1017 251 304 98 0 chr17 56685577 56685669 -38586982 + MLT1J1 LTR MaLR 63 163 -281 2 1017 393 22 0 0 chr17 56685709 56685755 -38586896 + (CCA)n Simple_repeat Simple_repeat 1 46 0 2 1017 180 0 0 0 chr17 56685755 56685775 -38586876 + (CAA)n Simple_repeat Simple_repeat 3 22 0 2 1017 774 219 52 24 chr17 56686175 56686386 -38586265 + ID_B1 SINE B4 8 224 0 2 1017 609 221 21 21 chr17 56687162 56687305 -38585346 - B1_Mur1 SINE Alu -6 143 1 2 1017 197 65 0 31 chr17 56687305 56687337 -38585314 + (TTTTTA)n Simple_repeat Simple_repeat 6 36 0 2 1017 313 256 50 41 chr17 56687343 56687504 -38585147 + B3A SINE B2 16 201 -15 2 1017 412 219 87 24 chr17 56688220 56688346 -38584305 - RSINE1 SINE B4 -30 135 2 2 1017 189 0 0 0 chr17 56689057 56689078 -38583573 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1017 1243 119 0 0 chr17 56689078 56689272 -38583379 - B2_Mm2 SINE B2 0 195 2 2 1017 546 16 0 0 chr17 56689735 56689798 -38582853 + (CATA)n Simple_repeat Simple_repeat 2 64 0 2 1017 298 219 44 79 chr17 56689823 56689937 -38582714 + MT2B LTR ERVL 154 263 -338 2 1017 550 179 28 0 chr17 56689839 56689945 -38582706 + B1_Mur1 SINE Alu 9 117 -32 2 1017 319 250 109 25 chr17 56689945 56689958 -38582693 + ID_B1 SINE B4 90 218 -6 2 1017 293 288 0 14 chr17 56690037 56690111 -38582540 + PB1D7 SINE Alu 47 119 -1 2 1017 248 238 35 87 chr17 56690305 56690420 -38582231 - ZP3AR Satellite Satellite -53 159 51 2 1017 342 156 0 0 chr17 56691488 56691552 -38581099 + GA-rich Low_complexity Low_complexity 1 64 0 2 1017 286 225 16 70 chr17 56693202 56693331 -38579320 + (CAGAGA)n Simple_repeat Simple_repeat 5 126 0 2 1017 254 202 55 132 chr17 56694801 56694892 -38577759 + MT2B LTR ERVL 155 238 -363 2 1017 424 178 51 9 chr17 56694824 56694931 -38577720 + B1_Mus1 SINE Alu 10 114 -6 2 1017 523 170 66 7 chr17 56695314 56695450 -38577201 - ZP3AR Satellite Satellite -26 186 43 2 1017 818 155 42 0 chr17 56695461 56695603 -38577048 - B1_Mur4 SINE Alu 0 150 3 2 1017 507 112 241 0 chr17 56695756 56695872 -38576779 - B2_Mm2 SINE B2 -5 190 47 2 1017 973 78 149 0 chr17 56695900 56696054 -38576597 - B2_Mm1t SINE B2 -14 179 3 3 1017 254 323 0 16 chr17 56696054 56696117 -38576534 + PB1D10 SINE Alu 13 74 -43 3 1017 982 64 57 0 chr17 56696170 56696310 -38576341 + B1_Mus1 SINE Alu 1 148 0 3 1017 885 89 123 0 chr17 56696928 56697074 -38575577 - B2_Mm2 SINE B2 -31 164 1 3 1017 390 286 0 43 chr17 56697286 56697403 -38575248 - PB1D7 SINE Alu 0 120 9 3 1017 400 238 139 0 chr17 56697448 56697549 -38575102 - B1_Mur3 SINE Alu -27 122 8 3 1017 440 122 108 0 chr17 56697628 56697702 -38574949 - B1_Mur2 SINE Alu 0 149 68 3 1017 619 206 42 21 chr17 56697704 56697848 -38574803 - B1_Mus2 SINE Alu 0 147 1 3 1017 1625 26 0 0 chr17 56699149 56699341 -38573310 + B2_Mm1a SINE B2 2 193 0 3 1017 1099 225 217 19 chr17 56699357 56699887 -38572764 + Lx7 LINE L1 6798 7432 -264 3 1017 252 277 0 46 chr17 56699899 56699949 -38572702 + polypurine Low_complexity Low_complexity 3 48 0 3 1017 990 62 0 0 chr17 56699949 56700078 -38572573 + B1_Mus2 SINE Alu 1 129 -18 3 1017 252 277 0 46 chr17 56700078 56700114 -38572537 + polypurine Low_complexity Low_complexity 49 84 0 3 1017 235 303 69 29 chr17 56700238 56700340 -38572311 + MT2B LTR ERVL 152 257 -344 3 1017 665 165 8 8 chr17 56700263 56700385 -38572266 + B1_Mus2 SINE Alu 26 147 0 3 1017 265 364 112 0 chr17 56701165 56701434 -38571217 - L1MB3 LINE L1 -33 6150 5852 3 1017 236 333 52 0 chr17 56706652 56706748 -38565903 + ID_B1 SINE B4 73 173 -51 3 1017 230 212 148 12 chr17 56706685 56706766 -38565885 + PB1D10 SINE Alu 25 116 -1 3 1017 585 121 50 0 chr17 56706854 56706953 -38565698 - B1_Mus2 SINE Alu -1 146 43 3 1017 780 151 8 0 chr17 56707334 56707460 -38565191 - B1_Mur4 SINE Alu 0 150 24 3 1017 471 271 20 34 chr17 56707460 56707483 -38565168 - ID_B1 SINE B4 0 224 78 3 1017 221 268 36 0 chr17 56708079 56708135 -38564516 - PB1D10 SINE Alu -8 109 52 3 1017 317 317 87 0 chr17 56708620 56708724 -38563927 - ID_B1 SINE B4 -62 162 50 3 1017 359 313 130 0 chr17 56708767 56708882 -38563769 - RSINE1 SINE B4 -24 141 12 3 1017 258 327 54 9 chr17 56708929 56709040 -38563611 + PB1D10 SINE Alu 1 116 -1 3 1017 207 162 0 0 chr17 56709461 56709498 -38563153 + T-rich Low_complexity Low_complexity 1 37 0 3 1017 1058 88 0 39 chr17 56709498 56709652 -38562999 - B1_Mus1 SINE Alu 0 148 1 3 1017 280 259 63 32 chr17 56713326 56713437 -38559214 + B1_Mur1 SINE Alu 33 139 -10 3 1017 245 286 16 0 chr17 56713454 56713517 -38559134 + tRNA-Ala-GCY_ tRNA tRNA 3 66 -9 3 1017 214 333 0 15 chr17 56713462 56713529 -38559122 + ID4 SINE ID 18 83 0 3 1017 513 287 176 13 chr17 56713806 56714039 -38558612 - B4A SINE B4 -8 284 14 3 1017 279 161 0 0 chr17 56715216 56715272 -38557379 + CT-rich Low_complexity Low_complexity 1 56 0 3 1017 225 0 0 0 chr17 56717459 56717484 -38555167 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 1017 351 0 0 0 chr17 56717484 56717522 -38555129 + (GA)n Simple_repeat Simple_repeat 1 39 0 3 1017 569 320 61 65 chr17 56718842 56719089 -38553562 - B4A SINE B4 -32 260 15 3 1017 189 154 0 0 chr17 56719159 56719198 -38553453 + A-rich Low_complexity Low_complexity 1 39 0 3 1017 312 273 184 12 chr17 56719572 56719734 -38552917 + B4A SINE B4 5 194 -98 3 1017 611 288 98 36 chr17 56719734 56719820 -38552831 + ORR1E LTR MaLR 4 101 -258 3 1017 1121 171 36 31 chr17 56719820 56720044 -38552607 - URR1B DNA MER1_type 0 225 1 3 1017 611 288 98 36 chr17 56720044 56720234 -38552417 + ORR1E LTR MaLR 102 296 -63 3 1017 496 301 41 7 chr17 56720349 56720496 -38552155 + RSINE1 SINE B4 11 162 -3 3 1017 225 376 39 22 chr17 56720496 56720531 -38552120 + B3A SINE B2 10 194 -4 3 1017 502 308 35 23 chr17 56720555 56720728 -38551923 + B4A SINE B4 109 283 -9 3 1017 246 293 163 47 chr17 56721551 56721680 -38550971 - RSINE1 SINE B4 -19 146 3 3 1017 245 306 34 34 chr17 56721716 56721804 -38550847 - MT2B2 LTR ERVL -297 287 200 3 1017 237 222 95 0 chr17 56721750 56721813 -38550838 - PB1D10 SINE Alu -17 100 32 3 1017 436 265 84 24 chr17 56721861 56722027 -38550624 + B4A SINE B4 6 181 -111 3 1017 636 276 58 39 chr17 56722033 56722214 -38550437 + B3 SINE B2 6 186 -30 3 1017 273 29 0 0 chr17 56722214 56722248 -38550403 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1017 636 276 58 39 chr17 56722248 56722273 -38550378 + B3 SINE B2 187 216 0 3 1017 186 43 0 0 chr17 56724100 56724123 -38548528 + (C)n Simple_repeat Simple_repeat 1 23 0 3 1017 21 57 0 0 chr17 56724484 56724519 -38548132 + AT_rich Low_complexity Low_complexity 1 35 0 3 1017 277 186 36 4 chr17 56725336 56725402 -38547249 + B1F SINE Alu 45 113 -36 3 1017 271 288 50 0 chr17 56725481 56725561 -38547090 + B4 SINE B4 17 100 -192 3 1017 409 275 246 0 chr17 56726203 56726385 -38546266 + B4A SINE B4 44 270 -22 3 1017 202 90 130 29 chr17 56726498 56726567 -38546084 + (GTTTG)n Simple_repeat Simple_repeat 3 78 0 3 1017 986 77 23 8 chr17 56726598 56726729 -38545922 - B1_Mus1 SINE Alu -15 133 1 3 1017 273 366 0 26 chr17 56727749 56727864 -38544787 + B4A SINE B4 11 122 -170 3 1017 381 206 71 20 chr17 56729098 56729197 -38543454 + B1F2 SINE Alu 46 149 0 3 1017 370 307 42 14 chr17 56729208 56729350 -38543301 + B4A SINE B4 2 147 -145 3 1017 1038 92 42 0 chr17 56729401 56729543 -38543108 + B1_Mus1 SINE Alu 1 148 0 3 1017 234 260 38 25 chr17 56729710 56729789 -38542862 + ID4 SINE ID 4 83 0 3 1017 594 291 26 11 chr17 56729875 56730066 -38542585 + B3A SINE B2 1 194 -4 3 1017 756 172 67 0 chr17 56730102 56730236 -38542415 - B1_Mur4 SINE Alu -7 143 1 3 1017 270 289 0 0 chr17 56730415 56730491 -38542160 - ID_B1 SINE B4 -26 198 123 3 1017 624 319 90 28 chr17 56731468 56731791 -38540860 + ORR1D2 LTR MaLR 5 347 -23 3 1017 281 289 87 8 chr17 56731826 56731942 -38540709 - B1_Mur1 SINE Alu 0 149 33 3 1017 288 290 35 35 chr17 56732230 56732336 -38540315 + B1F SINE Alu 1 106 -11 3 1017 248 286 14 41 chr17 56732660 56732733 -38539918 - B3 SINE B2 -145 71 1 3 1017 243 0 0 0 chr17 56732745 56732772 -38539879 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 3 1017 390 292 28 9 chr17 56732791 56732898 -38539753 - RSINE1 SINE B4 -54 111 3 3 1017 275 161 17 0 chr17 56732914 56732973 -38539678 - MTE2a LTR MaLR -308 71 12 3 1017 189 151 57 0 chr17 56734735 56734788 -38537863 + (TA)n Simple_repeat Simple_repeat 1 56 0 3 1017 790 137 76 0 chr17 56735799 56735930 -38536721 + B1_Mur1 SINE Alu 1 141 -8 3 1017 279 161 0 0 chr17 56738229 56738285 -38534366 + GA-rich Low_complexity Low_complexity 1 56 0 3 1017 459 244 17 34 chr17 56739298 56739417 -38533234 + PB1D10 SINE Alu 1 117 0 3 1017 1359 53 24 108 chr17 56741406 56741581 -38531070 - B2_Mm2 SINE B2 -1 194 28 3 1017 1171 61 0 33 chr17 56741581 56741734 -38530917 - B1_Mus1 SINE Alu 0 148 1 3 1017 1359 53 24 108 chr17 56741734 56741770 -38530881 - B2_Mm2 SINE B2 -168 27 1 3 1017 240 35 0 0 chr17 56744845 56744874 -38527777 + (TGG)n Simple_repeat Simple_repeat 3 31 0 3 1017 200 34 0 33 chr17 56745653 56745683 -38526968 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1017 1195 174 227 14 chr17 56746624 56746928 -38525723 + MTD LTR MaLR 60 395 -24 3 1017 347 251 47 38 chr17 56747426 56747546 -38525105 - B1F1 SINE Alu 0 127 2 3 1017 945 227 32 9 chr17 56747546 56747764 -38524887 - ID_B1 SINE B4 -1 223 1 3 1017 464 260 158 0 chr17 56747789 56747916 -38524735 - B1F SINE Alu 0 149 3 3 1017 1156 28 28 0 chr17 56748526 56748669 -38523982 - B1_Mus1 SINE Alu 0 148 2 3 1017 1607 197 68 8 chr17 56749802 56750155 -38522496 - ORR1D1 LTR MaLR 0 374 1 3 1017 796 174 28 7 chr17 56750243 56750388 -38522263 - B1_Mur4 SINE Alu -2 148 1 3 1017 285 230 174 17 chr17 56750396 56750511 -38522140 - B1F1 SINE Alu 0 149 17 3 1017 187 256 228 22 chr17 56750632 56750724 -38521927 - L2a LINE L2 -279 3147 3037 3 1017 235 339 61 18 chr17 56752135 56752241 -38520410 + RSINE1 SINE B4 43 154 -11 3 1017 1188 36 7 0 chr17 56752241 56752380 -38520271 - B1_Mus2 SINE Alu -6 141 2 3 1017 878 156 21 67 chr17 56752416 56752609 -38520042 - B2_Mm2 SINE B2 -7 188 5 3 1018 1265 48 0 0 chr17 56756642 56756788 -38515863 - B1_Mus2 SINE Alu 0 147 2 3 1018 466 221 115 0 chr17 56756866 56756988 -38515663 + B1_Mur2 SINE Alu 14 149 0 3 1018 373 182 13 25 chr17 56759098 56759177 -38513474 - ID_B1 SINE B4 -23 201 124 3 1018 278 272 31 52 chr17 56759103 56759200 -38513451 - B1F SINE Alu -30 119 25 3 1018 269 295 32 0 chr17 56759256 56759351 -38513300 + PB1 SINE Alu 15 112 -15 3 1018 664 230 7 28 chr17 56760141 56760284 -38512367 + RSINE1 SINE B4 1 140 -25 3 1018 256 276 165 48 chr17 56760397 56760500 -38512151 - PB1D10 SINE Alu 0 117 3 3 1018 540 178 10 0 chr17 56760568 56760669 -38511982 + PB1D9 SINE Alu 9 110 -10 3 1018 3304 46 2 10 chr17 56760698 56761097 -38511554 + MTA_Mm LTR MaLR 1 396 0 3 1018 198 0 0 0 chr17 56761270 56761292 -38511359 + (CACAG)n Simple_repeat Simple_repeat 5 26 0 3 1018 258 295 124 9 chr17 56762986 56763099 -38509552 + B1_Mus2 SINE Alu 1 126 -21 4 1018 516 239 220 6 chr17 56763104 56763281 -38509370 + B3 SINE B2 1 215 -1 4 1018 205 182 0 0 chr17 56763282 56763315 -38509336 + (CATA)n Simple_repeat Simple_repeat 1 33 0 4 1018 412 341 0 0 chr17 56763351 56763477 -38509174 - B1F SINE Alu -23 126 1 4 1018 401 279 27 0 chr17 56763531 56763642 -38509009 - PB1D7 SINE Alu 0 120 7 4 1018 1313 185 172 0 chr17 56763698 56764001 -38508650 + ORR1D1 LTR MaLR 1 355 -19 4 1018 307 290 9 27 chr17 56764664 56764774 -38507877 + ID_B1 SINE B4 117 224 0 4 1018 251 308 72 63 chr17 56764778 56764889 -38507762 - MIR SINE MIR -55 207 96 4 1018 1479 57 0 35 chr17 56767711 56767912 -38504739 - B2_Mm2 SINE B2 0 195 2 4 1018 270 0 0 0 chr17 56768436 56768466 -38504185 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 4 1018 1203 35 21 0 chr17 56768466 56768609 -38504042 - B1_Mm SINE Alu -1 146 1 4 1018 316 257 18 73 chr17 56768741 56768850 -38503801 - RMER20B LTR ERVK -502 125 23 4 1018 470 232 26 9 chr17 56769199 56769312 -38503339 + PB1D10 SINE Alu 1 115 -2 4 1018 2715 99 40 8 chr17 56769443 56769841 -38502810 - IAPLTR2a LTR ERVK 0 411 1 4 1018 394 180 92 15 chr17 56769898 56770023 -38502628 - B1_Mur2 SINE Alu -18 131 1 4 1018 450 0 0 0 chr17 56770035 56770085 -38502566 + (TC)n Simple_repeat Simple_repeat 1 50 0 4 1018 662 206 120 7 chr17 56770099 56770241 -38502410 - RSINE1 SINE B4 -5 160 3 4 1018 227 358 50 97 chr17 56770276 56770514 -38502137 - B4 SINE B4 -4 288 62 4 1018 936 177 94 0 chr17 56770651 56770843 -38501808 + B3 SINE B2 1 210 -6 4 1018 1963 138 114 27 chr17 56771091 56771502 -38501149 - RMER1B Other Other 0 1066 620 4 1018 285 237 61 10 chr17 56771585 56771683 -38500968 - ID_B1 SINE B4 0 224 122 4 1018 211 185 0 52 chr17 56771801 56771898 -38500753 + C-rich Low_complexity Low_complexity 5 96 0 4 1018 198 0 0 0 chr17 56771917 56771939 -38500712 + (T)n Simple_repeat Simple_repeat 1 22 0 4 1018 1288 34 0 0 chr17 56771939 56772086 -38500565 - B1_Mus2 SINE Alu 0 147 1 4 1018 258 105 0 0 chr17 56772137 56772175 -38500476 + (A)n Simple_repeat Simple_repeat 1 38 0 4 1018 197 33 33 0 chr17 56772323 56772353 -38500298 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1018 415 294 17 0 chr17 56772397 56772516 -38500135 - RSINE1 SINE B4 0 165 45 4 1018 842 37 0 0 chr17 56772663 56772771 -38499880 + B1_Mm SINE Alu 40 147 0 4 1018 191 203 17 0 chr17 56773177 56773236 -38499415 + C-rich Low_complexity Low_complexity 5 64 0 4 1018 1085 196 33 5 chr17 56773325 56773535 -38499116 - B3 SINE B2 0 216 1 4 1018 435 218 23 20 chr17 56773835 56774001 -38498650 + B3 SINE B2 39 196 -2 4 1018 709 259 46 10 chr17 56773998 56774193 -38498458 - B3 SINE B2 -1 215 14 4 1018 259 246 87 0 chr17 56774196 56774265 -38498386 + 4.5SRNA scRNA scRNA 17 91 -3 4 1018 361 227 4 16 chr17 56774371 56774481 -38498170 + B1_Mur2 SINE Alu 4 119 -1 4 1018 723 277 95 34 chr17 56774586 56774881 -38497770 + MTE2b LTR MaLR 29 341 -38 4 1018 226 213 21 0 chr17 56775076 56775123 -38497528 - ID_B1 SINE B4 -2 222 175 4 1018 325 137 178 0 chr17 56775136 56775209 -38497442 - B3 SINE B2 -130 86 1 4 1018 222 37 0 0 chr17 56775211 56775238 -38497413 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 4 1018 379 271 52 0 chr17 56775249 56775345 -38497306 - PB1D10 SINE Alu -3 114 14 4 1018 320 303 128 8 chr17 56775382 56775515 -38497136 + B1F2 SINE Alu 1 149 0 4 1018 323 287 28 9 chr17 56775532 56775641 -38497010 + B3A SINE B2 83 193 -5 4 1018 293 239 50 71 chr17 56775953 56776052 -38496599 - PB1D10 SINE Alu 0 117 21 4 1018 237 330 22 11 chr17 56775988 56776077 -38496574 - ID_B1 SINE B4 -59 165 76 4 1018 287 49 24 0 chr17 56776099 56776140 -38496511 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 4 1018 1215 62 0 0 chr17 56776152 56776298 -38496353 - B1_Mus2 SINE Alu -1 146 1 4 1018 435 252 37 0 chr17 56776326 56776433 -38496218 + B1_Mur1 SINE Alu 38 148 -1 4 1018 1327 116 5 0 chr17 56776437 56776627 -38496024 + B2_Mm1t SINE B2 2 192 -1 4 1018 219 174 0 42 chr17 56776627 56776675 -38495976 + GA-rich Low_complexity Low_complexity 1 46 0 4 1018 239 329 154 24 chr17 56776896 56777142 -38495509 - Lx8 LINE L1 -587 6886 6609 4 1018 645 291 82 0 chr17 56777241 56777447 -38495204 - Lx8 LINE L1 -1027 6446 6224 4 1018 219 69 0 0 chr17 56777474 56777503 -38495148 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 4 1018 920 143 7 0 chr17 56777505 56777645 -38495006 - B1_Mur4 SINE Alu -9 141 1 4 1018 413 287 0 0 chr17 56777675 56777776 -38494875 + PB1D7 SINE Alu 3 103 -17 4 1018 271 183 33 0 chr17 56777878 56777938 -38494713 + (CAGAGA)n Simple_repeat Simple_repeat 2 63 0 4 1018 284 207 0 39 chr17 56777939 56778095 -38494556 + (CA)n Simple_repeat Simple_repeat 1 150 0 4 1018 423 130 0 0 chr17 56778112 56778189 -38494462 + (CAGA)n Simple_repeat Simple_repeat 4 80 0 4 1018 1687 187 66 6 chr17 56778887 56779221 -38493430 - ORR1B1 LTR MaLR 0 394 41 4 1018 1087 214 62 207 chr17 56779688 56779934 -38492717 - ORR1D1 LTR MaLR -2 372 194 4 1018 1217 36 0 0 chr17 56779934 56780073 -38492578 - B1_Mm SINE Alu -8 139 1 4 1018 1087 214 62 207 chr17 56780073 56780261 -38492390 - ORR1D1 LTR MaLR -181 193 1 4 1018 212 325 123 16 chr17 56780413 56780535 -38492116 + 7SLRNA srpRNA srpRNA 8 142 -172 4 1018 470 264 62 0 chr17 56780718 56780862 -38491789 - ID_B1 SINE B4 -55 169 17 4 1018 699 199 100 62 chr17 56781199 56781429 -38491222 + MTD LTR MaLR 4 244 -175 4 1018 980 67 7 0 chr17 56781402 56781537 -38491114 + B1_Mus1 SINE Alu 13 148 0 4 1018 467 165 24 0 chr17 56781552 56781637 -38491014 + MTD LTR MaLR 196 282 -137 4 1018 606 129 0 0 chr17 56781642 56781735 -38490916 + B1_Mur4 SINE Alu 58 150 0 4 1018 278 304 0 0 chr17 56781881 56781960 -38490691 + (CA)n Simple_repeat Simple_repeat 2 80 0 4 1018 233 225 0 0 chr17 56781960 56782000 -38490651 + B3 SINE B2 32 71 -145 4 1018 246 194 14 69 chr17 56782197 56782269 -38490382 + ZP3AR Satellite Satellite 21 88 -124 4 1018 765 58 0 0 chr17 56782222 56782326 -38490325 + BC1_Mm scRNA scRNA 1 104 -48 4 1018 1123 69 112 28 chr17 56782338 56782517 -38490134 + B2_Mm2 SINE B2 1 194 -1 4 1018 1206 68 0 0 chr17 56782523 56782669 -38489982 + B1_Mus2 SINE Alu 2 147 0 4 1018 195 42 0 0 chr17 56782695 56782719 -38489932 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1018 1000 231 59 90 chr17 56782840 56783140 -38489511 - RLTR40 LTR ERVK -13 804 501 4 1018 656 164 0 41 chr17 56783140 56783261 -38489390 - PB1D9 SINE Alu 0 120 5 4 1018 1000 231 59 90 chr17 56783261 56783384 -38489267 - RLTR40 LTR ERVK -317 500 394 4 1018 252 194 32 16 chr17 56783405 56783468 -38489183 + RLTR19C LTR ERVK 33 96 -410 4 1018 609 282 44 57 chr17 56783612 56783841 -38488810 + RLTR33 LTR ERVK 450 675 -3 4 1018 281 194 181 0 chr17 56783905 56783934 -38488717 - RLTR40 LTR ERVK -491 326 298 4 1018 324 0 0 0 chr17 56783934 56783970 -38488681 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1018 281 194 181 0 chr17 56783970 56784012 -38488639 - RLTR40 LTR ERVK -520 297 243 4 1018 1460 84 5 0 chr17 56784016 56784207 -38488444 + B2_Mm1t SINE B2 1 192 -1 4 1018 697 176 28 21 chr17 56784266 56784411 -38488240 - RLTR40 LTR ERVK -570 247 102 4 1018 712 183 30 0 chr17 56784429 56784560 -38488091 - B1_Mur2 SINE Alu -10 139 5 4 1018 232 182 0 0 chr17 56784576 56784620 -38488031 + T-rich Low_complexity Low_complexity 1 44 0 4 1018 1063 78 43 0 chr17 56784621 56784762 -38487889 - B1_Mus1 SINE Alu 0 148 2 4 1018 885 164 7 7 chr17 56784767 56784914 -38487737 - B1_Mus2 SINE Alu 0 147 1 4 1018 1334 95 26 5 chr17 56784927 56785117 -38487534 - B2_Mm2 SINE B2 0 195 2 4 1018 350 21 0 21 chr17 56785156 56785204 -38487447 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 4 1018 1082 52 7 7 chr17 56785204 56785341 -38487310 - B1_Mm SINE Alu -10 137 1 4 1018 764 228 200 0 chr17 56785362 56785542 -38487109 - B3 SINE B2 0 216 1 4 1018 441 295 20 26 chr17 56785544 56785697 -38486954 - ID_B1 SINE B4 -68 156 5 4 1018 290 152 0 0 chr17 56785728 56785774 -38486877 + B3 SINE B2 2 47 -169 4 1018 342 0 0 0 chr17 56785774 56785812 -38486839 + (T)n Simple_repeat Simple_repeat 1 38 0 4 1018 1168 88 0 7 chr17 56785826 56785975 -38486676 - B1_Mus1 SINE Alu 0 148 1 4 1018 614 230 6 42 chr17 56785976 56786144 -38486507 + B3A SINE B2 37 198 0 4 1018 1699 31 0 0 chr17 56786205 56786397 -38486254 - B2_Mm1a SINE B2 0 193 2 4 1018 1199 61 0 7 chr17 56786399 56786547 -38486104 - B1_Mus1 SINE Alu 0 148 2 4 1018 650 172 9 0 chr17 56786557 56786673 -38485978 + B1_Mus2 SINE Alu 24 140 -7 4 1018 405 0 0 0 chr17 56786674 56786719 -38485932 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1018 754 196 42 18 chr17 56786719 56786885 -38485766 + B2_Mm2 SINE B2 17 186 -9 4 1018 22 0 0 0 chr17 56787295 56787317 -38485334 + GC_rich Low_complexity Low_complexity 1 22 0 4 1018 3480 182 52 35 chr17 56787318 56788181 -38484470 - RMER17A2 LTR ERVK -12 894 17 4 1018 380 270 6 0 chr17 56788189 56788350 -38484301 + (TCCA)n Simple_repeat Simple_repeat 2 163 0 4 1018 207 0 0 0 chr17 56788350 56788373 -38484278 + (CATA)n Simple_repeat Simple_repeat 2 24 0 4 1018 380 270 6 0 chr17 56788373 56788389 -38484262 + (TCCA)n Simple_repeat Simple_repeat 2 17 0 4 1018 282 328 133 0 chr17 56788456 56788584 -38484067 + MER76 LTR ERVL 313 457 -234 4 1018 376 257 147 26 chr17 56788653 56788809 -38483842 - B3 SINE B2 -2 214 40 4 1018 418 206 24 15 chr17 56788818 56788930 -38483721 - PB1D7 SINE Alu -1 119 5 5 1018 263 243 14 14 chr17 56788938 56789009 -38483642 - PB1D10 SINE Alu -7 110 40 5 1018 588 284 127 40 chr17 56789375 56789745 -38482906 - MTD LTR MaLR -15 404 3 5 1018 575 280 153 0 chr17 56789746 56789903 -38482748 + B3A SINE B2 2 182 -16 5 1018 216 0 0 0 chr17 56789929 56789953 -38482698 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1018 403 319 148 42 chr17 56790381 56790597 -38482054 - B4A SINE B4 -6 286 48 5 1018 362 238 9 47 chr17 56790613 56790719 -38481932 - ZP3AR Satellite Satellite -69 143 42 5 1018 439 339 0 0 chr17 56791676 56791806 -38480845 - RSINE1 SINE B4 -2 163 34 5 1018 630 300 48 25 chr17 56792009 56792240 -38480411 - ID_B1 SINE B4 -35 257 17 5 1018 1135 62 0 20 chr17 56792305 56792445 -38480206 + B1_Mus1 SINE Alu 4 141 -7 5 1018 207 0 0 0 chr17 56792445 56792468 -38480183 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 1018 367 248 136 9 chr17 56792671 56792781 -38479870 + RSINE1 SINE B4 37 160 -5 5 1018 344 237 18 50 chr17 56792833 56792948 -38479703 + PB1D7 SINE Alu 10 126 -1 5 1018 231 364 0 11 chr17 56793371 56793460 -38479191 + PB1D10 SINE Alu 28 115 -2 5 1018 228 297 0 0 chr17 56793470 56793534 -38479117 + ZP3AR Satellite Satellite 149 212 0 5 1018 279 202 10 21 chr17 56794138 56794234 -38478417 + CT-rich Low_complexity Low_complexity 2 96 0 5 1018 270 196 0 0 chr17 56794609 56794701 -38477950 + (TG)n Simple_repeat Simple_repeat 2 93 0 5 1018 250 366 35 9 chr17 56794756 56794869 -38477782 - PB1D10 SINE Alu 0 117 2 5 1018 354 305 89 17 chr17 56795646 56795826 -38476825 + ID_B1 SINE B4 1 193 -31 5 1018 570 29 0 0 chr17 56795831 56795899 -38476752 + (TG)n Simple_repeat Simple_repeat 1 68 0 5 1018 378 0 0 0 chr17 56795899 56795940 -38476711 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 1018 1084 178 33 55 chr17 56795942 56796215 -38476436 - RLTR11A LTR ERVK -3 525 259 5 1018 318 26 0 0 chr17 56796238 56796277 -38476374 + (TC)n Simple_repeat Simple_repeat 1 39 0 5 1018 478 219 144 14 chr17 56796279 56796418 -38476233 - RLTR11A LTR ERVK -362 166 10 5 1018 477 188 19 0 chr17 56796426 56796580 -38476071 + (TG)n Simple_repeat Simple_repeat 1 157 0 5 1018 606 235 111 10 chr17 56796591 56796789 -38475862 - MTD LTR MaLR -2 417 200 5 1018 213 39 0 0 chr17 56796789 56796815 -38475836 + (TCC)n Simple_repeat Simple_repeat 2 27 0 5 1018 360 0 0 0 chr17 56796834 56796874 -38475777 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 5 1018 1135 99 0 0 chr17 56796875 56797037 -38475614 - B2_Mm2 SINE B2 -33 162 1 5 1018 728 218 132 15 chr17 56797042 56797060 -38475591 - MTD LTR MaLR -190 229 210 5 1018 1063 129 0 0 chr17 56797060 56797207 -38475444 - B1_Mus2 SINE Alu 0 147 1 5 1018 728 218 132 15 chr17 56797207 56797393 -38475258 - MTD LTR MaLR -210 209 1 5 1018 579 172 0 130 chr17 56797830 56797917 -38474734 - URR1B DNA MER1_type 0 225 139 5 1018 904 178 7 0 chr17 56797917 56798063 -38474588 + B1_Mus1 SINE Alu 2 148 0 5 1018 579 172 0 130 chr17 56798063 56798129 -38474522 - URR1B DNA MER1_type -87 138 92 5 1018 1196 120 35 2 chr17 56798127 56798366 -38474285 + RLTR31A_Mm LTR ERVK 115 326 -231 5 1018 1192 69 0 0 chr17 56798563 56798708 -38473943 + B1_Mus2 SINE Alu 2 146 -1 5 1018 387 0 0 0 chr17 56799193 56799236 -38473415 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1018 216 0 0 0 chr17 56799236 56799259 -38473392 + (GA)n Simple_repeat Simple_repeat 1 24 0 5 1018 1866 223 95 27 chr17 56799867 56800393 -38472258 - MTC-int LTR MaLR -305 953 392 5 1018 569 117 21 0 chr17 56800398 56800492 -38472159 - MTC LTR MaLR -198 223 128 5 1018 303 229 81 45 chr17 56801020 56801130 -38471521 - B1F1 SINE Alu 0 117 3 5 1018 224 244 0 35 chr17 56801334 56801391 -38471260 + PB1D7 SINE Alu 9 63 -86 5 1018 1146 69 14 0 chr17 56801423 56801568 -38471083 + B1_Mus1 SINE Alu 2 148 0 5 1018 313 250 169 32 chr17 56801816 56801940 -38470711 - B1F SINE Alu -8 141 1 5 1018 532 200 8 40 chr17 56802907 56803032 -38469619 + ID_B1 SINE B4 96 216 -8 5 1018 180 0 0 0 chr17 56803329 56803349 -38469302 + (CAAG)n Simple_repeat Simple_repeat 2 21 0 5 1018 832 146 0 4 chr17 56804389 56804535 -38468116 - B1_Mur4 SINE Alu -5 145 5 5 1018 518 252 0 83 chr17 56804391 56804560 -38468091 - ID_B1 SINE B4 -3 221 67 5 1018 307 256 45 23 chr17 56804670 56804758 -38467893 - RLTR23 LTR ERV1 0 430 341 5 1018 4592 84 13 2 chr17 56805026 56805634 -38467017 - L1_Mus3 LINE L1 0 6638 6024 5 1018 1516 34 17 0 chr17 56805634 56805810 -38466841 - B2_Mm2 SINE B2 -15 180 2 5 1018 484 222 379 0 chr17 56806058 56806306 -38466345 - ORR1D1 LTR MaLR -30 344 3 5 1018 253 294 95 56 chr17 56806479 56806605 -38466046 + ID_B1 SINE B4 17 147 -77 5 1018 398 200 20 82 chr17 56806622 56806720 -38465931 + ID_B1 SINE B4 123 214 -10 5 1018 549 331 88 32 chr17 56806826 56807199 -38465452 - RMER5 LTR ERV1 0 534 141 5 1018 1031 224 124 54 chr17 56807199 56807530 -38465121 - ORR1C1 LTR MaLR 0 378 25 5 1018 319 174 193 34 chr17 56807567 56807686 -38464965 - RMER5 LTR ERV1 -389 145 8 5 1018 209 139 23 0 chr17 56807893 56807936 -38464715 + CT-rich Low_complexity Low_complexity 1 44 0 5 1018 293 250 90 11 chr17 56808093 56808182 -38464469 + B4A SINE B4 38 133 -159 5 1018 275 235 42 14 chr17 56808513 56808599 -38464052 + PB1D7 SINE Alu 31 118 -2 5 1018 284 279 88 24 chr17 56808627 56808641 -38464010 + B1F1 SINE Alu 16 144 -1 5 1018 448 164 47 28 chr17 56808641 56808748 -38463903 + ID_B1 SINE B4 111 219 -5 5 1018 897 86 0 0 chr17 56808922 56809050 -38463601 + (TTC)n Simple_repeat Simple_repeat 3 130 0 5 1018 198 0 0 0 chr17 56809050 56809072 -38463579 + (TC)n Simple_repeat Simple_repeat 2 23 0 5 1018 957 91 68 0 chr17 56809073 56809205 -38463446 - B1_Mus1 SINE Alu -6 142 2 5 1018 582 290 80 0 chr17 56809214 56809414 -38463237 - ID_B1 SINE B4 -1 223 8 5 1018 41 31 0 15 chr17 56809851 56809885 -38462766 + AT_rich Low_complexity Low_complexity 1 34 0 5 1018 1634 27 0 5 chr17 56809885 56810072 -38462579 - B2_Mm1a SINE B2 -6 187 2 5 1018 41 31 0 15 chr17 56810072 56810103 -38462548 + AT_rich Low_complexity Low_complexity 1 31 0 5 1018 632 260 0 72 chr17 56810103 56810298 -38462353 - B3A SINE B2 -5 193 13 5 1018 767 237 12 0 chr17 56810360 56810533 -38462118 + URR1A DNA MER1_type 51 225 -1 5 1018 493 198 0 0 chr17 56810564 56810660 -38461991 - PB1D9 SINE Alu 0 120 25 5 1018 289 279 86 11 chr17 56810775 56810985 -38461666 + B4A SINE B4 1 281 -11 5 1018 353 301 11 17 chr17 56811038 56811156 -38461495 + PB1D7 SINE Alu 7 120 0 5 1018 484 280 42 0 chr17 56811164 56811307 -38461344 + ID_B1 SINE B4 68 216 -8 5 1018 1256 41 0 0 chr17 56811356 56811502 -38461149 - B1_Mus2 SINE Alu 0 147 2 5 1018 405 250 0 61 chr17 56811515 56811613 -38461038 + PB1D10 SINE Alu 19 110 -7 5 1018 182 132 0 50 chr17 56811710 56811750 -38460901 + CT-rich Low_complexity Low_complexity 3 40 0 5 1018 525 32 0 0 chr17 56811750 56811813 -38460838 + (TC)n Simple_repeat Simple_repeat 2 64 0 5 1018 1193 43 0 0 chr17 56811813 56811953 -38460698 - B1_Mus2 SINE Alu -6 141 2 5 1018 279 307 42 42 chr17 56811957 56812076 -38460575 + B3A SINE B2 64 182 -16 5 1018 412 119 297 18 chr17 56812096 56812207 -38460444 - B1_Mus1 SINE Alu -1 147 6 5 1018 23 0 0 0 chr17 56812764 56812787 -38459864 + GC_rich Low_complexity Low_complexity 1 23 0 5 1018 23 68 0 0 chr17 56812842 56812886 -38459765 + GC_rich Low_complexity Low_complexity 1 44 0 5 1018 989 136 161 5 chr17 56813653 56813845 -38458806 - URR1B DNA MER1_type 0 225 4 5 1018 1317 90 26 11 chr17 56814009 56814200 -38458451 - B2_Mm2 SINE B2 -1 194 1 5 1018 23 0 0 0 chr17 56814477 56814500 -38458151 + GC_rich Low_complexity Low_complexity 1 23 0 5 1018 1136 90 7 0 chr17 56814599 56814744 -38457907 - B1_Mus1 SINE Alu -1 147 2 5 1018 317 254 149 0 chr17 56814788 56814800 -38457851 - B1F SINE Alu 0 149 22 5 1018 396 242 91 0 chr17 56814800 56814899 -38457752 - ID_B1 SINE B4 -14 210 103 5 1018 558 220 0 0 chr17 56815893 56816002 -38456649 - ID_B1 SINE B4 -2 222 114 5 1018 1213 61 0 0 chr17 56816023 56816171 -38456480 - B1_Mus1 SINE Alu 0 148 1 5 1018 326 192 38 25 chr17 56817620 56817700 -38454951 - MER20 DNA MER1_type 0 219 139 5 1018 336 48 0 0 chr17 56817784 56817826 -38454825 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 5 1018 214 319 51 0 chr17 56817832 56817860 -38454791 - B2_Mm1a SINE B2 -1 192 165 5 1018 1186 49 7 0 chr17 56817860 56818003 -38454648 + B1_Mm SINE Alu 2 145 -2 5 1018 338 115 383 9 chr17 56818003 56818112 -38454539 - B2_Mm2 SINE B2 -14 181 47 5 1018 1072 128 92 0 chr17 56818144 56818308 -38454343 - B2_Mm1t SINE B2 -14 179 1 5 1018 353 262 148 47 chr17 56818597 56818725 -38453926 + B1F SINE Alu 1 141 -8 5 1018 189 0 0 0 chr17 56818760 56818781 -38453870 + (TGG)n Simple_repeat Simple_repeat 2 22 0 5 1018 483 184 91 9 chr17 56818782 56818892 -38453759 + B1_Mur3 SINE Alu 18 136 -13 5 1018 234 342 76 71 chr17 56819365 56819563 -38453088 + Charlie8 DNA MER1_type 66 264 -2164 5 1018 886 104 30 0 chr17 56819820 56819954 -38452697 - B1_Mus2 SINE Alu -1 146 9 5 1018 616 104 6 2 chr17 56819959 56820074 -38452577 - B1_Mus1 SINE Alu 0 120 3 5 1018 192 158 0 0 chr17 56820098 56820136 -38452515 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1018 396 271 21 0 chr17 56823001 56823097 -38449554 - B3A SINE B2 -100 98 1 5 1018 306 198 80 106 chr17 56823238 56823351 -38449300 - ID_B1 SINE B4 -54 170 61 6 1018 425 175 159 37 chr17 56824969 56825076 -38447575 + PB1D9 SINE Alu 1 120 0 6 1018 435 83 0 0 chr17 56826204 56826264 -38446387 + (TG)n Simple_repeat Simple_repeat 2 61 0 6 1018 210 200 0 43 chr17 56827035 56827082 -38445569 + B1F SINE Alu 93 137 -12 6 1018 553 210 16 48 chr17 56827091 56827216 -38445435 - B3 SINE B2 -27 189 69 6 1018 496 183 85 11 chr17 56828063 56828157 -38444494 + PB1D9 SINE Alu 2 102 -18 6 1018 316 160 0 5 chr17 56828460 56828525 -38444126 - B2_Mm2 SINE B2 -107 109 47 6 1018 1320 97 23 0 chr17 56828570 56828746 -38443905 - B2_Mm1t SINE B2 -13 180 1 6 1018 671 206 6 64 chr17 56828868 56829024 -38443627 - B1_Mur1 SINE Alu -2 147 1 6 1018 1181 115 21 32 chr17 56829034 56829223 -38443428 - B2_Mm2 SINE B2 -8 187 1 6 1018 960 133 15 0 chr17 56829277 56829412 -38443239 + B1_Mus1 SINE Alu 1 137 -11 6 1018 881 244 56 0 chr17 56829492 56829689 -38442962 - B3 SINE B2 -6 210 3 6 1018 216 86 0 0 chr17 56829702 56829737 -38442914 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1018 1162 57 0 0 chr17 56829739 56829880 -38442771 - B1_Mus2 SINE Alu -6 141 1 6 1018 538 281 154 22 chr17 56829885 56830067 -38442584 - ID_B1 SINE B4 -7 217 12 6 1018 275 217 55 172 chr17 56830082 56830163 -38442488 - PB1D7 SINE Alu 0 120 51 6 1018 1081 115 0 26 chr17 56830163 56830315 -38442336 - B1_Mus1 SINE Alu 0 148 1 6 1018 275 217 55 172 chr17 56830315 56830361 -38442290 - PB1D7 SINE Alu -70 50 8 6 1018 508 229 0 0 chr17 56831025 56831130 -38441521 - PB1D10 SINE Alu -11 106 2 6 1018 262 284 32 0 chr17 56831225 56831320 -38441331 + PB1 SINE Alu 2 99 -28 6 1018 333 281 0 94 chr17 56832608 56832714 -38439937 + B4A SINE B4 2 97 -195 6 1018 482 306 63 32 chr17 56833872 56834061 -38438590 - B3 SINE B2 -14 202 8 6 1018 310 167 91 0 chr17 56834179 56834245 -38438406 - PB1D10 SINE Alu -5 112 41 6 1018 202 109 0 61 chr17 56837045 56837094 -38435557 + (CACCC)n Simple_repeat Simple_repeat 1 46 0 6 1018 479 261 172 29 chr17 56837097 56837306 -38435345 - B4 SINE B4 -51 241 3 6 1018 952 142 28 0 chr17 56837886 56838027 -38434624 + B1_Mur4 SINE Alu 1 145 -5 6 1018 467 294 0 0 chr17 56838057 56838159 -38434492 + ID_B1 SINE B4 82 183 -41 6 1018 1082 120 0 0 chr17 56838692 56838834 -38433817 - B1_Mur4 SINE Alu -8 142 1 6 1018 354 306 152 72 chr17 56839410 56839610 -38433041 - B4A SINE B4 -6 286 73 6 1018 1167 75 0 0 chr17 56839610 56839756 -38432895 - B1_Mus2 SINE Alu -1 146 1 6 1018 354 306 152 72 chr17 56839756 56839819 -38432832 - B4A SINE B4 -220 72 3 6 1018 180 152 0 0 chr17 56841630 56841663 -38430988 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1018 831 165 11 6 chr17 56841800 56841977 -38430674 + CT-rich Low_complexity Low_complexity 3 180 0 6 1018 474 286 8 0 chr17 56841979 56842098 -38430553 - B1_Mur1 SINE Alu -28 121 2 6 1018 1226 62 0 0 chr17 56843434 56843580 -38429071 + B1_Mus2 SINE Alu 2 147 0 6 1018 355 353 20 20 chr17 56843987 56844140 -38428511 + RSINE1 SINE B4 3 155 -10 6 1018 1214 62 0 0 chr17 56845188 56845332 -38427319 - B1_Mus1 SINE Alu 0 148 5 6 1018 718 306 15 0 chr17 56845396 56845592 -38427059 - ID_B1 SINE B4 -3 221 23 6 1018 288 225 0 14 chr17 56845930 56846002 -38426649 - PB1D10 SINE Alu -40 77 7 6 1018 424 248 82 9 chr17 56846009 56846119 -38426532 - PB1D9 SINE Alu -2 118 1 6 1018 267 303 80 60 chr17 56847760 56847777 -38424874 + B4A SINE B4 71 90 -202 6 1018 573 207 57 4 chr17 56847777 56847912 -38424739 + B1_Mur1 SINE Alu 1 146 -1 6 1018 274 278 44 11 chr17 56849123 56849214 -38423437 + PB1D7 SINE Alu 26 119 -1 6 1018 258 217 141 28 chr17 56852573 56852644 -38420007 + ID_B1 SINE B4 80 158 -66 6 1018 229 246 39 0 chr17 56852808 56852872 -38419779 - ID4 SINE ID -5 78 9 6 1018 394 256 32 40 chr17 56853004 56853130 -38419521 + ZP3AR Satellite Satellite 40 164 -48 6 1018 489 269 0 15 chr17 56853928 56854060 -38418591 + ID_B1 SINE B4 90 219 -5 6 1018 202 250 120 0 chr17 56854108 56854200 -38418451 - L2a LINE L2 -250 3176 3074 6 1018 341 212 194 39 chr17 56854359 56854462 -38418189 + PB1D7 SINE Alu 1 119 -1 6 1018 454 336 71 0 chr17 56855361 56855501 -38417150 - RSINE1 SINE B4 -2 163 14 6 1018 412 195 301 0 chr17 56855519 56855642 -38417009 + ID_B1 SINE B4 64 223 -1 6 1018 359 248 71 47 chr17 56855840 56855853 -38416798 - B1F SINE Alu -1 148 19 6 1018 440 248 26 9 chr17 56855853 56855967 -38416684 - ID_B1 SINE B4 -9 215 100 6 1018 312 196 74 25 chr17 56857648 56857780 -38414871 - PB1D10 SINE Alu -2 145 14 6 1018 233 242 32 0 chr17 56857732 56857794 -38414857 - B4A SINE B4 -146 146 83 6 1018 215 31 31 0 chr17 56857803 56857835 -38414816 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 6 1018 419 271 23 82 chr17 56857865 56858071 -38414580 - B3 SINE B2 0 195 4 6 1018 455 275 9 0 chr17 56858080 56858189 -38414462 - PB1D9 SINE Alu -3 117 8 6 1018 251 349 9 70 chr17 56858088 56858202 -38414449 - ID_B1 SINE B4 -38 186 80 6 1018 379 121 43 0 chr17 56858469 56858546 -38414105 + PB1D9 SINE Alu 1 80 -70 6 1018 240 35 0 0 chr17 56858911 56858940 -38413711 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 6 1018 305 297 21 62 chr17 56863534 56863631 -38409020 + RSINE1 SINE B4 30 122 -43 6 1018 271 206 245 0 chr17 56863836 56863938 -38408713 + ID_B1 SINE B4 93 219 -5 6 1018 228 167 80 40 chr17 56863894 56863944 -38408707 + B1F SINE Alu 97 148 -1 6 1018 272 234 112 14 chr17 56864938 56865083 -38407568 - L1MC1 LINE L1 -435 5898 5671 6 1018 230 253 193 0 chr17 56865101 56865184 -38407467 - PB1D10 SINE Alu -7 110 12 6 1018 1267 48 0 0 chr17 56865258 56865405 -38407246 + B1_Mm SINE Alu 1 147 0 6 1018 207 0 0 0 chr17 56865405 56865428 -38407223 + (A)n Simple_repeat Simple_repeat 1 23 0 6 1018 303 311 19 0 chr17 56865463 56865566 -38407085 - L1MC1 LINE L1 -648 5685 5581 6 1018 964 110 110 0 chr17 56865741 56865895 -38406756 + B2_Mm2 SINE B2 3 173 -22 6 1018 191 250 66 0 chr17 56865930 56866006 -38406645 - MIRb SINE MIR -129 139 59 6 1018 285 243 54 54 chr17 56866750 56866824 -38405827 - PB1D10 SINE Alu -43 74 1 6 1018 530 229 30 8 chr17 56867165 56867297 -38405354 + ZP3AR Satellite Satellite 46 180 -32 6 1018 299 330 57 16 chr17 56867435 56867591 -38405060 + MIR SINE MIR 13 179 -97 6 1018 294 29 0 0 chr17 56868148 56868183 -38404468 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 6 1018 263 319 0 0 chr17 56868397 56868466 -38404185 - ID SINE ID -152 72 4 6 1018 1074 106 0 22 chr17 56869014 56869198 -38403453 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 1018 189 0 0 0 chr17 56869695 56869716 -38402935 + (TTCA)n Simple_repeat Simple_repeat 3 23 0 6 1018 671 211 0 30 chr17 56869718 56869850 -38402801 - B1_Mur4 SINE Alu -13 137 10 6 1018 274 255 8 157 chr17 56869750 56869871 -38402780 - MT2B LTR ERVL -344 257 155 6 1018 880 58 8 0 chr17 56870068 56870188 -38402463 + B1_Mm SINE Alu 26 146 -1 6 1018 807 288 69 0 chr17 56871108 56871341 -38401310 + B4A SINE B4 44 292 0 6 1018 224 298 7 7 chr17 56871341 56871497 -38401154 + (CA)n Simple_repeat Simple_repeat 1 156 0 6 1018 765 251 89 0 chr17 56874740 56874931 -38397720 - ID_B1 SINE B4 0 224 17 6 1018 421 270 45 0 chr17 56874935 56875046 -38397605 - PB1D10 SINE Alu -1 116 1 6 1018 417 238 0 0 chr17 56875857 56875941 -38396710 - RSINE1 SINE B4 -10 155 72 6 1018 766 220 43 16 chr17 56876095 56876280 -38396371 - B3A SINE B2 -8 190 1 6 1018 403 212 35 12 chr17 56876328 56876414 -38396237 + PB1D7 SINE Alu 32 119 -1 6 1018 361 247 89 54 chr17 56876420 56876632 -38396019 + B4A SINE B4 2 284 -8 6 1018 319 245 42 11 chr17 56877244 56877339 -38395312 + ID_B1 SINE B4 122 219 -5 6 1018 378 0 0 0 chr17 56880112 56880154 -38392497 + (TC)n Simple_repeat Simple_repeat 2 43 0 6 1018 450 0 0 0 chr17 56880154 56880203 -38392448 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 1018 210 351 20 41 chr17 56880773 56880871 -38391780 + B1F1 SINE Alu 5 100 -49 6 1018 451 185 11 21 chr17 56880894 56880988 -38391663 + B1_Mur1 SINE Alu 44 136 -13 6 1018 189 0 0 0 chr17 56880988 56881009 -38391642 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 6 1018 1077 58 51 0 chr17 56881013 56881150 -38391501 - B1_Mus1 SINE Alu 0 148 5 6 1018 207 196 0 0 chr17 56881166 56881212 -38391439 + A-rich Low_complexity Low_complexity 1 46 0 6 1018 1598 37 21 0 chr17 56881216 56881404 -38391247 + B2_Mm1t SINE B2 1 192 -1 6 1018 933 145 14 0 chr17 56881405 56881550 -38391101 + B1_Mur3 SINE Alu 3 149 0 6 1018 1342 68 39 6 chr17 56881742 56881920 -38390731 - B2_Mm2 SINE B2 -10 185 2 6 1018 416 239 0 0 chr17 56881975 56882063 -38390588 - PB1D9 SINE Alu -24 96 9 6 1018 305 279 0 41 chr17 56882069 56882166 -38390485 + PB1D7 SINE Alu 28 120 0 6 1018 334 277 75 0 chr17 56882271 56882365 -38390286 + B3A SINE B2 10 110 -88 6 1018 446 214 11 0 chr17 56882472 56882561 -38390090 + ZP3AR Satellite Satellite 27 116 -96 7 1018 285 264 69 86 chr17 56882858 56882974 -38389677 - RSINE1 SINE B4 0 165 52 7 1018 260 315 87 0 chr17 56883194 56883286 -38389365 + ID_B1 SINE B4 106 205 -19 7 1018 705 82 0 0 chr17 56883314 56883411 -38389240 + (TTCC)n Simple_repeat Simple_repeat 4 100 0 7 1018 1199 67 12 0 chr17 56883411 56883575 -38389076 + (TTTC)n Simple_repeat Simple_repeat 4 170 0 7 1018 1115 59 7 0 chr17 56883575 56883710 -38388941 - B1_Mus1 SINE Alu -11 137 2 7 1018 229 287 83 83 chr17 56883943 56884076 -38388575 - ID_B1 SINE B4 0 224 92 7 1018 1600 242 51 5 chr17 56884114 56884505 -38388146 + MTD LTR MaLR 3 411 -8 7 1018 743 318 35 24 chr17 56884775 56885062 -38387589 + B4A SINE B4 1 290 -2 7 1018 1196 69 0 0 chr17 56885076 56885221 -38387430 + B1_Mus2 SINE Alu 1 145 -2 7 127 261 57 0 0 chr17 56885221 56885256 -38387395 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1019 360 324 42 0 chr17 56885466 56885608 -38387043 + ID_B1 SINE B4 76 223 -1 7 1019 1779 140 237 0 chr17 56886355 56886748 -38385903 + RMER15 LTR ERVL 11 496 -79 7 1019 2009 260 95 21 chr17 56886748 56887537 -38385114 + RMER15-int LTR ERVL 726 1572 -3427 7 1019 309 323 136 0 chr17 56887920 56888075 -38384576 + RMER15-int LTR ERVL 2192 2367 -2632 7 1019 917 274 104 43 chr17 56888077 56888182 -38384469 + RMER15-int LTR ERVL 4033 4135 -864 7 1019 1374 93 0 35 chr17 56888182 56888383 -38384268 + B2_Mm2 SINE B2 1 194 -1 7 1019 917 274 104 43 chr17 56888383 56888719 -38383932 + RMER15-int LTR ERVL 4136 4501 -498 7 1019 434 239 0 0 chr17 56888816 56888908 -38383743 + RMER15-int LTR ERVL 4635 4726 -273 7 1019 2088 160 193 12 chr17 56888910 56889391 -38383260 + RMER15 LTR ERVL 8 575 0 7 1019 638 248 68 33 chr17 56889864 56890073 -38382578 - B3 SINE B2 0 195 1 7 1019 2113 120 81 6 chr17 56890138 56890498 -38382153 + MTC LTR MaLR 16 402 -19 7 1019 22 35 0 0 chr17 56891129 56891158 -38381493 + GC_rich Low_complexity Low_complexity 1 29 0 7 1019 388 224 45 27 chr17 56891419 56891529 -38381122 + ID_B1 SINE B4 113 224 0 7 1019 192 304 42 28 chr17 56891992 56892063 -38380588 - L2 LINE L2 -364 3055 2984 7 1019 295 185 148 0 chr17 56892410 56892491 -38380160 - ID_B1 SINE B4 -1 223 131 7 1019 210 288 138 43 chr17 56893513 56893629 -38379022 - B1F SINE Alu -22 127 1 7 1019 347 190 290 0 chr17 56893530 56893630 -38379021 - ID_B1 SINE B4 -15 209 81 7 1019 217 308 50 25 chr17 56894694 56894774 -38377877 + MIRc SINE MIR 110 191 -77 7 1019 368 187 165 0 chr17 56894973 56895064 -38377587 - ID_B1 SINE B4 -2 222 117 7 1019 290 250 188 8 chr17 56894977 56895094 -38377557 - B1F SINE Alu -6 143 6 7 1019 288 0 0 0 chr17 56895136 56895168 -38377483 + (CCA)n Simple_repeat Simple_repeat 2 33 0 7 1019 283 266 10 21 chr17 56895199 56895295 -38377356 + L2c LINE L2 3071 3165 -222 7 1019 205 178 0 0 chr17 56895421 56895466 -38377185 + T-rich Low_complexity Low_complexity 1 45 0 7 1019 438 20 0 0 chr17 56896001 56896052 -38376599 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1019 25 0 0 0 chr17 56897581 56897606 -38375045 + GC_rich Low_complexity Low_complexity 1 25 0 7 1019 700 52 43 29 chr17 56899308 56899446 -38373205 + (CAGAGA)n Simple_repeat Simple_repeat 5 144 0 7 1019 217 264 0 0 chr17 56899998 56900051 -38372600 - MIRm SINE MIR -138 138 86 7 1019 1833 168 22 103 chr17 56900068 56900514 -38372137 + RMER17C LTR ERVK 1 410 0 7 1019 197 290 0 92 chr17 56900916 56900992 -38371659 + MIRc SINE MIR 117 185 -83 7 1019 285 246 0 76 chr17 56900995 56901074 -38371577 - ID_B1 SINE B4 -16 208 136 7 1019 268 245 16 124 chr17 56901152 56901273 -38371378 - PB1D10 SINE Alu -9 108 1 7 1019 395 273 0 20 chr17 56901925 56902026 -38370625 + PB1D7 SINE Alu 22 120 0 7 1019 495 221 19 0 chr17 56902071 56902175 -38370476 + ID_B1 SINE B4 119 224 0 7 1019 257 278 0 14 chr17 56903070 56903143 -38369508 + B1_Mur2 SINE Alu 77 148 -1 7 1019 304 117 100 0 chr17 56903190 56903250 -38369401 + B1_Mm SINE Alu 72 137 -10 7 1019 186 71 0 0 chr17 56903269 56903297 -38369354 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 7 1019 335 290 53 8 chr17 56903375 56903507 -38369144 + RSINE1 SINE B4 28 165 0 7 1019 677 113 19 0 chr17 56903540 56903646 -38369005 + PB1D9 SINE Alu 13 120 0 7 1019 314 238 213 0 chr17 56903541 56903663 -38368988 + B4A SINE B4 99 246 -46 7 1019 907 125 27 20 chr17 56903791 56903938 -38368713 - B1_Mur4 SINE Alu 0 150 3 7 1019 22 0 0 0 chr17 56904122 56904144 -38368507 + GC_rich Low_complexity Low_complexity 1 22 0 7 1019 714 148 94 0 chr17 56905392 56905520 -38367131 - B1_Mus1 SINE Alu 0 148 9 7 1019 1416 51 68 0 chr17 56905530 56905546 -38367105 - B2_Mm1a SINE B2 -4 189 174 7 1019 387 0 0 0 chr17 56905546 56905589 -38367062 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 7 1019 1416 51 68 0 chr17 56905589 56905749 -38366902 - B2_Mm1a SINE B2 -20 173 2 7 1019 1537 53 21 0 chr17 56905751 56905941 -38366710 - B2_Mm2 SINE B2 -1 194 1 7 1019 425 259 112 0 chr17 56905957 56906073 -38366578 - B3 SINE B2 -84 132 4 7 1019 268 186 68 0 chr17 56909278 56909337 -38363314 - PB1D7 SINE Alu -2 118 56 7 1019 588 191 35 9 chr17 56909410 56909526 -38363125 - PB1D9 SINE Alu -1 119 1 7 1019 300 53 0 0 chr17 56911623 56911661 -38360990 + (TG)n Simple_repeat Simple_repeat 1 38 0 7 1019 230 301 78 26 chr17 56911713 56911829 -38360822 + B1F SINE Alu 27 148 -1 7 1019 296 375 19 38 chr17 56911861 56912019 -38360632 + ID_B1 SINE B4 12 166 -58 7 1019 309 295 52 10 chr17 56911945 56912041 -38360610 + PB1D10 SINE Alu 13 112 -5 7 1019 372 154 46 0 chr17 56912698 56912763 -38359888 - B1_Mur2 SINE Alu -6 143 76 7 1019 473 246 34 8 chr17 56912800 56912919 -38359732 - ID_B1 SINE B4 0 224 103 7 1019 276 302 95 0 chr17 56913344 56913460 -38359191 + ID_B1 SINE B4 19 145 -79 7 1019 217 116 44 44 chr17 56913460 56913505 -38359146 + (CAGAGA)n Simple_repeat Simple_repeat 3 47 0 7 1019 284 113 19 0 chr17 56914196 56914249 -38358402 - B1_Mm SINE Alu 0 147 94 7 1019 1396 67 39 0 chr17 56914252 56914431 -38358220 - B2_Mm2 SINE B2 -9 186 1 7 1019 948 238 29 15 chr17 56914462 56914667 -38357984 - B3 SINE B2 -8 208 1 7 1019 362 264 75 81 chr17 56917085 56917246 -38355405 - B3 SINE B2 -12 204 45 7 1019 1649 47 0 0 chr17 56917648 56917841 -38354810 - B2_Mm1a SINE B2 0 193 1 7 1019 682 198 0 38 chr17 56917891 56918022 -38354629 - B1_Mm SINE Alu -7 140 15 7 1019 330 67 0 0 chr17 56918022 56918067 -38354584 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 1019 385 257 44 35 chr17 56918099 56918212 -38354439 - B3 SINE B2 -65 151 38 7 1019 2212 149 48 5 chr17 56918615 56919014 -38353637 + MTC LTR MaLR 1 416 -5 7 1019 321 233 110 20 chr17 56919559 56919709 -38352942 - ID_B1 SINE B4 -5 219 6 7 1019 410 291 29 0 chr17 56919711 56919814 -38352837 - PB1D10 SINE Alu 0 117 12 7 1019 180 234 0 0 chr17 56920390 56920437 -38352214 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 1019 318 237 26 13 chr17 56920629 56920706 -38351945 + MTEa LTR MaLR 268 345 -34 7 1019 447 178 58 29 chr17 56921087 56921191 -38351460 - RSINE1 SINE B4 -57 108 2 7 1019 207 0 0 0 chr17 56921368 56921391 -38351260 + (CCCCAG)n Simple_repeat Simple_repeat 6 28 0 7 1019 206 304 0 0 chr17 56922130 56922176 -38350475 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1019 724 187 58 0 chr17 56922246 56922385 -38350266 - B1_Mur3 SINE Alu 0 149 3 7 1019 223 298 25 126 chr17 56923326 56923445 -38349206 + PB1D10 SINE Alu 13 119 -1 7 1019 333 200 42 14 chr17 56924359 56924430 -38348221 + ID4_ SINE ID 5 77 -6 7 1019 229 299 0 0 chr17 56925196 56925263 -38347388 - L1M2 LINE L1 -444 5856 5790 7 1019 415 170 30 10 chr17 56925590 56925691 -38346960 + ZP3AR Satellite Satellite 36 138 -74 7 1019 205 246 0 0 chr17 56925748 56925805 -38346846 + A-rich Low_complexity Low_complexity 5 61 0 7 1019 255 253 81 46 chr17 56926265 56926352 -38346299 - MER103 DNA DNA -71 95 6 7 1019 377 221 63 0 chr17 56926532 56926627 -38346024 + ID_B1 SINE B4 124 224 0 7 1019 274 333 40 24 chr17 56926666 56926685 -38345966 + B4A SINE B4 81 143 -149 7 1019 328 179 0 133 chr17 56926685 56926775 -38345876 + MT2B LTR ERVL 178 255 -346 7 1019 611 147 0 52 chr17 56926695 56926830 -38345821 + PB1D9 SINE Alu 23 138 -11 7 1019 274 333 40 24 chr17 56926775 56926792 -38345859 + B4A SINE B4 144 208 -84 7 1019 209 159 0 22 chr17 56927338 56927383 -38345268 + (CCCA)n Simple_repeat Simple_repeat 1 44 0 7 1019 291 260 32 72 chr17 56928677 56928784 -38343867 + B1F1 SINE Alu 14 117 -32 7 1019 180 238 63 0 chr17 56929223 56929286 -38343365 + L2b LINE L2 3263 3329 -46 7 1019 356 246 209 0 chr17 56929503 56929613 -38343038 + RSINE1 SINE B4 2 134 -31 7 1019 1387 180 164 30 chr17 56929723 56929843 -38342808 + MTC LTR MaLR 1 130 -291 7 1019 3460 38 0 0 chr17 56929843 56930239 -38342412 + MTA_Mm LTR MaLR 1 396 0 7 1019 1387 180 164 30 chr17 56930239 56930484 -38342167 + MTC LTR MaLR 131 415 -6 7 1019 1190 75 0 0 chr17 56931181 56931328 -38341323 + B1_Mus1 SINE Alu 2 148 0 7 1019 528 93 0 0 chr17 56931328 56931403 -38341248 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 7 1019 512 312 0 0 chr17 56932486 56932624 -38340027 + ID_B1 SINE B4 87 224 0 7 1019 491 192 10 10 chr17 56932651 56932751 -38339900 + PB1D10 SINE Alu 18 117 0 7 1019 621 238 94 36 chr17 56932944 56933136 -38339515 - B3 SINE B2 -7 209 7 7 1019 1882 198 114 28 chr17 56933136 56933634 -38339017 + RLTR20A LTR ERVK 1 541 0 8 1019 302 319 110 55 chr17 56934039 56934258 -38338393 + L1M4c LINE L1 1076 1306 -5078 8 1019 2238 181 30 27 chr17 56934728 56935304 -38337347 + MYSERV16_I-int LTR ERVK 1 430 -1896 8 1019 6574 153 110 40 chr17 56935303 56935714 -38336937 + MYSERV16_I-int LTR ERVK 595 992 -1334 8 1019 1195 54 0 39 chr17 56935714 56935867 -38336784 - B1_Mm SINE Alu 0 147 1 8 1019 6574 153 110 40 chr17 56935867 56936013 -38336638 + MYSERV16_I-int LTR ERVK 993 1204 -1122 8 1019 1157 75 7 0 chr17 56936013 56936159 -38336492 - B1_Mus2 SINE Alu 0 147 1 8 1019 6574 153 110 40 chr17 56936159 56937212 -38335439 + MYSERV16_I-int LTR ERVK 1205 2319 -7 8 1019 2403 152 86 77 chr17 56937217 56937662 -38334989 + RLTR20A LTR ERVK 1 439 -102 8 1019 711 112 0 0 chr17 56937662 56937769 -38334882 + (CGTG)n Simple_repeat Simple_repeat 1 107 0 8 1019 2403 152 86 77 chr17 56937769 56937859 -38334792 + RLTR20A LTR ERVK 440 540 -1 8 1019 336 216 309 8 chr17 56937876 56938002 -38334649 - ID_B1 SINE B4 -1 223 60 8 1019 429 336 81 0 chr17 56938066 56938215 -38334436 - ID_B1 SINE B4 -16 208 48 8 1019 454 255 47 0 chr17 56938242 56938348 -38334303 - PB1D10 SINE Alu -1 116 6 8 1019 552 212 6 79 chr17 56939119 56939283 -38333368 - B3 SINE B2 -8 208 57 8 1019 1403 80 11 0 chr17 56939318 56939505 -38333146 - B2_Mm1t SINE B2 -3 190 2 8 1019 312 257 34 84 chr17 56939515 56939634 -38333017 - PB1D7 SINE Alu -7 113 1 8 1019 603 185 140 7 chr17 56940173 56940309 -38332342 + RSINE1 SINE B4 12 165 0 8 1019 833 258 117 0 chr17 56940779 56941019 -38331632 - B4A SINE B4 -20 272 5 8 1019 252 255 0 0 chr17 56941027 56941078 -38331573 + polypyrimidine Low_complexity Low_complexity 2 52 0 8 1019 600 178 28 9 chr17 56941082 56941190 -38331461 - PB1D9 SINE Alu -9 111 2 8 1019 259 359 25 17 chr17 56941224 56941343 -38331308 + PB1D7 SINE Alu 1 120 0 8 1019 229 304 79 46 chr17 56941437 56941589 -38331062 + L1M4b LINE L1 1242 1398 -5936 8 1019 228 274 31 10 chr17 56941842 56941938 -38330713 + L1M4b LINE L1 6275 6372 -728 8 1019 322 156 36 88 chr17 56942445 56942536 -38330115 + PB1D10 SINE Alu 34 139 -10 8 1019 430 306 14 56 chr17 56943249 56943391 -38329260 + B3 SINE B2 67 202 -14 8 1019 591 230 0 0 chr17 56945077 56945242 -38327409 + (CA)n Simple_repeat Simple_repeat 1 165 0 8 1019 667 274 103 16 chr17 56945916 56946168 -38326483 + B4A SINE B4 13 286 -6 8 1019 339 276 0 0 chr17 56946182 56946269 -38326382 + B1F1 SINE Alu 12 98 -51 8 1019 231 61 0 0 chr17 56946358 56946391 -38326260 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1019 428 250 0 121 chr17 56946414 56946546 -38326105 + PB1D7 SINE Alu 2 117 -3 8 1019 224 314 14 14 chr17 56946671 56946742 -38325909 + ID4 SINE ID 13 83 0 8 1019 383 216 0 45 chr17 56947013 56947260 -38325391 + GA-rich Low_complexity Low_complexity 1 235 0 8 1019 554 225 6 0 chr17 56947285 56947463 -38325188 + GA-rich Low_complexity Low_complexity 1 179 0 8 1019 319 302 51 8 chr17 56947860 56947977 -38324674 + B4A SINE B4 27 148 -144 8 1019 297 249 148 93 chr17 56948384 56948566 -38324085 + B4 SINE B4 7 198 -94 8 1019 362 192 9 71 chr17 56948495 56948607 -38324044 + B1F SINE Alu 41 145 -4 8 1019 363 130 0 0 chr17 56948714 56948791 -38323860 + (CAGA)n Simple_repeat Simple_repeat 2 78 0 8 1019 523 329 99 44 chr17 56949008 56949301 -38323350 + Tigger7 DNA MER2_type 163 471 -2020 8 1019 252 254 0 27 chr17 56949301 56949374 -38323277 + (TG)n Simple_repeat Simple_repeat 1 71 0 8 1019 405 230 123 39 chr17 56950731 56950885 -38321766 - ID_B1 SINE B4 0 224 58 8 1019 280 189 0 0 chr17 56950987 56951040 -38321611 + RSINE1 SINE B4 4 56 -109 8 1019 1193 311 88 10 chr17 56951178 56951665 -38320986 + RMER5 LTR ERV1 10 534 0 8 1019 495 267 8 17 chr17 56952361 56952479 -38320172 + RSINE1 SINE B4 48 164 -1 8 1019 366 305 32 90 chr17 56952515 56952670 -38319981 - ID_B1 SINE B4 -55 237 88 8 1019 1088 83 7 14 chr17 56952881 56953027 -38319624 + B1_Mus1 SINE Alu 3 147 -1 8 1019 917 62 0 37 chr17 56953596 56953730 -38318921 + B1_Mus2 SINE Alu 19 147 0 8 1019 30 0 0 0 chr17 56954050 56954080 -38318571 + AT_rich Low_complexity Low_complexity 1 30 0 8 1019 397 272 9 19 chr17 56954732 56954837 -38317814 - RSINE1 SINE B4 -59 106 3 8 1019 867 50 8 0 chr17 56955017 56955136 -38317515 - B1_Mus2 SINE Alu 0 147 28 8 1019 634 314 64 64 chr17 56955350 56955711 -38316940 + Lx8 LINE L1 6672 7032 -441 8 1019 557 179 114 0 chr17 56955951 56956074 -38316577 - ID_B1 SINE B4 -2 222 86 8 1019 881 163 7 13 chr17 56956126 56956275 -38316376 + B1_Mur2 SINE Alu 1 148 -1 8 1019 342 264 50 0 chr17 56956902 56957023 -38315628 + L1MB8 LINE L1 6039 6165 -13 8 1019 530 303 40 0 chr17 56957042 56957194 -38315457 - RSINE1 SINE B4 -2 163 6 8 1019 615 226 65 14 chr17 56957230 56957369 -38315282 + B1_Mur2 SINE Alu 4 149 0 8 1019 1326 59 42 31 chr17 56957369 56957562 -38315089 + B2_Mm2 SINE B2 1 195 0 8 1019 214 284 45 0 chr17 56957566 56957633 -38315018 - ID SINE ID -154 70 1 8 1019 407 194 11 0 chr17 56957586 56957679 -38314972 - ZP3AR Satellite Satellite -70 142 49 8 1019 321 219 24 12 chr17 56957734 56957817 -38314834 - PB1D10 SINE Alu -33 84 1 8 1019 724 194 132 0 chr17 56958219 56958363 -38314288 + RSINE1 SINE B4 3 165 0 8 1019 29 0 0 0 chr17 56958426 56958455 -38314196 + AT_rich Low_complexity Low_complexity 1 29 0 8 1019 1158 56 0 14 chr17 56959766 56959911 -38312740 - B1_Mus2 SINE Alu 0 147 5 8 1019 374 281 201 22 chr17 56960277 56960506 -38312145 + L1MB7 LINE L1 5871 6140 -44 8 1019 677 179 57 0 chr17 56960556 56960696 -38311955 + ID_B1 SINE B4 67 214 -10 8 1019 202 185 46 0 chr17 56960702 56960767 -38311884 + G-rich Low_complexity Low_complexity 5 72 0 8 1019 382 208 20 59 chr17 56960987 56961089 -38311562 + RSINE1 SINE B4 11 108 -57 8 1019 223 308 57 19 chr17 56961571 56961677 -38310974 + RSINE1 SINE B4 16 125 -40 8 1019 1635 149 106 155 chr17 56961807 56962259 -38310392 + RLTR23 LTR ERV1 1 430 0 8 1019 568 194 7 7 chr17 56963198 56963343 -38309308 + (TGGA)n Simple_repeat Simple_repeat 4 148 0 8 1019 1430 188 254 7 chr17 56963421 56963841 -38308810 - MT2A LTR ERVL -8 525 3 8 1019 303 349 63 8 chr17 56963851 56963978 -38308673 + L1MB7 LINE L1 5856 5989 -195 8 1019 650 294 19 47 chr17 56964636 56964847 -38307804 + ID_B1 SINE B4 18 222 -2 8 1019 832 211 31 71 chr17 56965418 56965642 -38307009 - ID_B1 SINE B4 -8 216 2 8 1019 607 258 77 53 chr17 56965656 56965865 -38306786 - B3 SINE B2 -2 214 1 8 1019 1082 59 46 0 chr17 56965867 56966020 -38306631 - B2_Mm2 SINE B2 -2 193 34 8 1019 433 221 16 0 chr17 56966582 56966653 -38305998 + (TCCA)n Simple_repeat Simple_repeat 2 74 0 8 1019 2346 146 132 13 chr17 56966653 56967124 -38305527 + RLTR11A2 LTR ERVK 1 527 0 8 1019 433 221 16 0 chr17 56967124 56967179 -38305472 + (TCCA)n Simple_repeat Simple_repeat 3 57 0 8 1019 251 241 62 103 chr17 56967607 56967704 -38304947 + RLTR25B LTR ERVK 417 509 -519 8 1019 745 89 18 9 chr17 56967633 56967746 -38304905 + B1_Mur2 SINE Alu 34 147 -2 8 1019 315 293 186 17 chr17 56968008 56968126 -38304525 + RSINE1 SINE B4 11 148 -17 8 1019 360 0 0 0 chr17 56968142 56968182 -38304469 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 1019 208 197 0 66 chr17 56970223 56970299 -38302352 + C-rich Low_complexity Low_complexity 5 75 0 8 1019 182 62 0 30 chr17 56970450 56970483 -38302168 + (CCCG)n Simple_repeat Simple_repeat 4 35 0 8 1019 557 247 53 7 chr17 56970897 56971048 -38301603 - B3A SINE B2 -3 195 38 8 1019 349 286 134 8 chr17 56971088 56971215 -38301436 - ID_B1 SINE B4 0 224 82 8 1019 252 0 0 0 chr17 56971409 56971437 -38301214 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 8 1019 353 314 118 8 chr17 56971493 56971612 -38301039 - B1F SINE Alu -11 138 7 8 1019 212 0 0 35 chr17 56971779 56971808 -38300843 + (CCCCCA)n Simple_repeat Simple_repeat 2 29 0 8 1019 3950 153 217 40 chr17 56972454 56973391 -38299260 + RLTR25A LTR ERVK 1 1103 0 8 1019 799 167 45 0 chr17 56973531 56973663 -38298988 - B1_Mus1 SINE Alu -10 138 1 8 1019 1239 54 0 0 chr17 56973687 56973834 -38298817 + B1_Mm SINE Alu 1 147 0 8 1019 297 0 0 0 chr17 56973858 56973891 -38298760 + (A)n Simple_repeat Simple_repeat 1 33 0 8 1019 1176 205 14 0 chr17 56973909 56974119 -38298532 + B3 SINE B2 3 215 -1 8 1019 649 220 249 6 chr17 56974150 56974319 -38298332 - B3 SINE B2 -6 210 1 8 1019 2424 80 6 63 chr17 56974352 56974635 -38298016 + ORR1A2 LTR MaLR 1 285 -42 8 1019 1252 77 71 16 chr17 56974635 56974819 -38297832 + B2_Mm2 SINE B2 1 194 -1 8 1019 2424 80 6 63 chr17 56974819 56974882 -38297769 + ORR1A2 LTR MaLR 286 327 0 8 1019 550 168 97 9 chr17 56974883 56974997 -38297654 + RSINE1 SINE B4 2 125 -40 8 1019 245 234 0 72 chr17 56975216 56975285 -38297366 + 4.5SRNA scRNA scRNA 25 88 -6 8 1019 594 136 0 37 chr17 56975229 56975336 -38297315 + B1_Mur2 SINE Alu 38 141 -9 8 1019 195 69 0 0 chr17 56975337 56975366 -38297285 + (CAAAC)n Simple_repeat Simple_repeat 3 31 0 8 1019 186 143 0 0 chr17 56975415 56975450 -38297201 + (CGAG)n Simple_repeat Simple_repeat 2 36 0 8 1019 368 309 73 55 chr17 56975979 56976198 -38296453 + RMER2 LTR ERV1 334 556 -11 8 1019 184 200 0 0 chr17 56977005 56977035 -38295616 + L4 LINE RTE 1791 1820 -209 8 1019 1017 303 38 20 chr17 56977308 56977699 -38294952 + MuRRS4-int LTR ERV1 1040 1437 -3626 8 1019 986 368 40 52 chr17 56977755 56978896 -38293755 + MuRRS4-int LTR ERV1 1812 2939 -4839 8 1019 180 0 0 0 chr17 56978905 56978925 -38293726 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 8 1019 1056 67 60 7 chr17 56978925 56979076 -38293575 - B2_Mm2 SINE B2 -36 159 1 8 1019 1215 350 55 11 chr17 56979079 56979696 -38292955 + MuLV-int LTR ERV1 2824 3431 -4175 9 1019 260 357 0 0 chr17 56980465 56980549 -38292102 + MuLV-int LTR ERV1 6188 6271 -1335 9 1019 276 261 0 0 chr17 56980523 56980588 -38292063 + RLTR19-int LTR ERVK 5474 5538 -599 9 1019 1162 74 6 0 chr17 56981461 56981623 -38291028 + B2_Mm1a SINE B2 1 163 -30 9 1019 242 29 29 0 chr17 56981623 56981658 -38290993 + (CAAA)n Simple_repeat Simple_repeat 3 38 0 9 1019 508 367 20 0 chr17 56981669 56981914 -38290737 + MuRRS4-int LTR ERV1 4491 4740 -323 9 1019 463 241 20 3 chr17 56981914 56982221 -38290430 + (CA)n Simple_repeat Simple_repeat 1 312 0 9 1019 340 265 14 0 chr17 56982234 56982381 -38290270 + (CA)n Simple_repeat Simple_repeat 2 150 0 9 1019 499 248 9 0 chr17 56982978 56983091 -38289560 + B4A SINE B4 2 115 -177 9 1019 309 307 65 41 chr17 56983404 56983529 -38289122 + MLT1B LTR MaLR 40 168 -222 9 1019 452 208 81 199 chr17 56983529 56983775 -38288876 + B4 SINE B4 2 218 -74 9 1019 1322 96 11 0 chr17 56983786 56983963 -38288688 + B2_Mm1t SINE B2 1 179 -14 9 1019 305 157 316 9 chr17 56983999 56984113 -38288538 + B2_Mm2 SINE B2 47 195 0 9 1019 342 327 41 24 chr17 56984444 56984613 -38288038 + B4A SINE B4 1 172 -120 9 1019 21 0 0 0 chr17 56985135 56985156 -38287495 + AT_rich Low_complexity Low_complexity 1 21 0 9 1019 590 288 11 17 chr17 56985180 56985360 -38287291 - B3A SINE B2 -19 179 1 9 1019 1626 165 117 17 chr17 56986232 56986505 -38286146 + MTC LTR MaLR 1 290 -131 9 1019 195 69 0 0 chr17 56986505 56986534 -38286117 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 9 1019 1626 165 117 17 chr17 56986534 56986612 -38286039 + MTC LTR MaLR 291 386 -35 9 1019 327 280 11 21 chr17 56986648 56986743 -38285908 - PB1D10 SINE Alu -2 115 22 9 1019 1062 96 27 20 chr17 56987589 56987738 -38284913 + B1_Mur4 SINE Alu 1 150 0 9 1019 1129 82 0 0 chr17 56988464 56988611 -38284040 - B1_Mus1 SINE Alu 0 148 2 9 1019 479 270 89 40 chr17 56988777 56989001 -38283650 + RMER15 LTR ERVL 339 573 -2 9 1019 231 276 0 0 chr17 56989842 56989929 -38282722 + (TG)n Simple_repeat Simple_repeat 2 88 0 9 1019 277 275 30 98 chr17 56990187 56990421 -38282230 + L1M4 LINE L1 5129 5346 -800 9 1019 195 204 0 0 chr17 56990535 56990589 -38282062 + A-rich Low_complexity Low_complexity 1 54 0 9 1019 1650 42 0 0 chr17 56990984 56991175 -38281476 + B2_Mm1a SINE B2 1 191 -2 9 1019 279 0 0 0 chr17 56991639 56991670 -38280981 + (T)n Simple_repeat Simple_repeat 1 31 0 9 1019 1297 27 0 0 chr17 56991670 56991817 -38280834 - B1_Mus2 SINE Alu 0 147 1 9 1019 487 262 33 0 chr17 56991879 56992001 -38280650 - RSINE1 SINE B4 -26 139 14 9 1019 400 234 34 23 chr17 56992073 56992248 -38280403 + (TG)n Simple_repeat Simple_repeat 1 177 0 9 1019 244 118 18 89 chr17 56992346 56992402 -38280249 + ORR1A3 LTR MaLR 267 318 -8 9 1019 1003 183 64 5 chr17 56992473 56992676 -38279975 + MTD LTR MaLR 6 220 -199 9 1019 549 252 44 0 chr17 56992740 56992875 -38279776 + RSINE1 SINE B4 10 150 -15 9 1019 365 329 27 7 chr17 56993395 56993542 -38279109 + (TATG)n Simple_repeat Simple_repeat 1 150 0 9 1019 751 186 35 12 chr17 56993663 56993832 -38278819 - Lx LINE L1 -1 6653 6481 9 1019 489 237 69 0 chr17 56993832 56993963 -38278688 + B3A SINE B2 26 165 -33 9 1019 743 83 17 0 chr17 56993981 56994101 -38278550 + (TCTCTG)n Simple_repeat Simple_repeat 3 124 0 9 1019 525 16 0 0 chr17 56994101 56994162 -38278489 + (CA)n Simple_repeat Simple_repeat 1 62 0 9 1019 455 338 36 45 chr17 56994219 56994442 -38278209 - B4A SINE B4 -71 221 1 9 1019 821 222 30 10 chr17 56994442 56994629 -38278022 - B4A SINE B4 -61 231 41 9 1019 607 271 50 28 chr17 56994640 56994822 -38277829 + B4A SINE B4 66 251 -41 9 1019 2311 122 53 13 chr17 56994995 56995392 -38277259 - MTC LTR MaLR -8 413 1 9 1019 624 217 0 0 chr17 56995587 56995707 -38276944 + ID_B1 SINE B4 104 223 -1 9 1019 615 251 186 32 chr17 56995734 56995981 -38276670 + B4 SINE B4 3 287 -5 9 1019 408 55 0 0 chr17 56995989 56996044 -38276607 + (GA)n Simple_repeat Simple_repeat 2 56 0 9 1019 209 200 0 0 chr17 56996087 56996122 -38276529 - MIR SINE MIR -115 147 113 9 1019 391 299 0 71 chr17 56996889 56997015 -38275636 - RSINE1 SINE B4 -47 118 2 9 1019 371 195 102 11 chr17 56997575 56997663 -38274988 + B1F SINE Alu 27 122 -27 9 1019 229 229 0 0 chr17 56997828 56997876 -38274775 + MER20 DNA MER1_type 85 132 -87 9 1019 394 224 18 18 chr17 56998015 56998107 -38274544 - ZP3AR Satellite Satellite -77 135 44 9 1019 292 238 84 19 chr17 56998107 56998214 -38274437 - PB1D10 SINE Alu -3 114 1 9 1019 394 224 18 18 chr17 56998214 56998230 -38274421 - ZP3AR Satellite Satellite -169 43 28 9 1019 3129 159 10 31 chr17 56998611 56999187 -38273464 + RLTR12A LTR ERVK 1 564 -4 9 1019 1395 120 0 0 chr17 56999335 56999526 -38273125 + B2_Mm2 SINE B2 3 193 -2 9 1019 310 209 12 218 chr17 56999713 56999878 -38272773 - B1F SINE Alu -1 148 18 9 1019 939 83 0 8 chr17 57000000 57000134 -38272517 + B1_Mus1 SINE Alu 15 147 -1 1 1019 198 0 0 0 chr17 57000155 57000177 -38272474 + (CAA)n Simple_repeat Simple_repeat 2 23 0 2 1019 301 123 195 52 chr17 57000208 57000285 -38272366 + RSINE1 SINE B4 43 130 -35 3 1019 330 87 0 0 chr17 57000296 57000342 -38272309 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1019 207 88 0 0 chr17 57001624 57001658 -38270993 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1019 548 236 39 8 chr17 57001799 57001927 -38270724 - B1F SINE Alu 0 149 18 6 1019 420 282 48 65 chr17 57001925 57002111 -38270540 - B4 SINE B4 0 292 110 7 1019 1087 117 0 11 chr17 57002437 57002619 -38270032 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 8 1019 1230 49 0 0 chr17 57002645 57002789 -38269862 - B1_Mus1 SINE Alu 0 148 5 9 1019 457 265 44 25 chr17 57002823 57002982 -38269669 - RSINE1 SINE B4 0 165 4 1 1019 495 323 134 17 chr17 57004226 57004623 -38268028 - L1MB3 LINE L1 -79 6104 5666 1 1019 1484 58 32 5 chr17 57004628 57004817 -38267834 + B2_Mm2 SINE B2 2 195 0 1 1019 296 186 43 0 chr17 57005203 57005273 -38267378 - B4 SINE B4 -98 194 122 1 1019 418 358 5 45 chr17 57005279 57005478 -38267173 - B3A SINE B2 -7 191 1 1 1019 263 270 163 23 chr17 57005527 57005656 -38266995 + ORR1C1-int LTR MaLR 398 544 -965 1 1019 1344 225 137 18 chr17 57005815 57006208 -38266443 + ORR1C1-int LTR MaLR 856 1295 -75 1 1019 854 283 50 11 chr17 57006446 57006728 -38265923 + LTRIS4 LTR ERV1 215 507 0 1 1019 225 293 50 82 chr17 57006767 57007046 -38265605 + RMER17C LTR ERVK 77 346 -64 1 1019 482 200 8 34 chr17 57007067 57007186 -38265465 + ORR1C1 LTR MaLR 226 341 -37 1 1019 27 0 0 0 chr17 57007187 57007214 -38265437 + AT_rich Low_complexity Low_complexity 1 27 0 1 1019 336 208 0 0 chr17 57007214 57007286 -38265365 + ORR1C1 LTR MaLR 303 374 0 1 1019 608 322 70 0 chr17 57007286 57007478 -38265173 - ID_B1 SINE B4 -18 206 1 1 1019 382 237 25 29 chr17 57007485 57007604 -38265047 - PB1D7 SINE Alu 0 120 2 2 1019 269 250 43 64 chr17 57007991 57008085 -38264566 - B3 SINE B2 -2 214 123 2 1019 323 340 40 7 chr17 57008155 57008306 -38264345 + RSINE1 SINE B4 8 163 -2 2 1019 247 256 72 60 chr17 57008521 57008604 -38264047 + B4A SINE B4 209 292 0 2 1019 429 203 0 0 chr17 57008608 57008682 -38263969 + ID_B1 SINE B4 144 217 -7 2 1019 1143 197 47 5 chr17 57008780 57008994 -38263657 - URR1A DNA MER1_type -2 224 2 2 1019 240 246 57 14 chr17 57009201 57009271 -38263380 - ORR1D2 LTR MaLR -295 75 3 2 1019 225 172 17 33 chr17 57009431 57009491 -38263160 + B3 SINE B2 158 216 0 2 1019 791 252 24 159 chr17 57009494 57009544 -38263107 + ORR1D2-int LTR MaLR 310 349 -1021 2 1019 1141 22 50 0 chr17 57009544 57009683 -38262968 - B1_Mm SINE Alu 0 147 2 2 1019 791 252 24 159 chr17 57009683 57009972 -38262679 + ORR1D2-int LTR MaLR 350 603 -767 2 1019 968 137 5 107 chr17 57010048 57010253 -38262398 + MTC LTR MaLR 25 208 -213 3 1019 477 219 144 13 chr17 57010268 57010550 -38262101 + ORR1D2 LTR MaLR 6 366 -4 2 1019 1584 198 190 38 chr17 57010683 57010821 -38261830 + RMER15 LTR ERVL 1 132 -443 3 1019 1588 194 176 8 chr17 57010821 57011179 -38261472 + MTD LTR MaLR 2 419 0 3 1019 1584 198 190 38 chr17 57011179 57011539 -38261112 + RMER15 LTR ERVL 133 575 0 3 1019 198 231 0 0 chr17 57011615 57011680 -38260971 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 1019 528 254 62 0 chr17 57011864 57011994 -38260657 + MTE2a LTR MaLR 228 365 -14 3 1019 218 229 32 16 chr17 57012517 57012579 -38260072 + CT-rich Low_complexity Low_complexity 1 63 0 3 1019 278 268 133 9 chr17 57012588 57012701 -38259950 + RSINE1 SINE B4 3 129 -36 3 1019 607 227 55 0 chr17 57012867 57012995 -38259656 + B1_Mur1 SINE Alu 1 135 -14 3 1019 378 0 0 0 chr17 57012995 57013037 -38259614 + (CAAAA)n Simple_repeat Simple_repeat 5 46 0 3 1019 750 269 43 5 chr17 57013041 57013250 -38259401 + B4A SINE B4 2 218 -74 3 1019 501 17 0 0 chr17 57013719 57013777 -38258874 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 1019 380 200 9 0 chr17 57013982 57014092 -38258559 + (TTCA)n Simple_repeat Simple_repeat 1 111 0 4 1019 596 235 117 6 chr17 57014250 57014430 -38258221 + ID_B1 SINE B4 1 200 -24 4 1019 445 274 139 28 chr17 57014434 57014686 -38257965 - L1MB3 LINE L1 -82 6101 5822 4 1019 219 294 0 0 chr17 57015113 57015164 -38257487 + CT-rich Low_complexity Low_complexity 1 51 0 4 1019 309 279 118 126 chr17 57015217 57015463 -38257188 + B4A SINE B4 49 292 0 4 127 3319 55 5 5 chr17 57016209 57016630 -38256021 - BGLII LTR ERVK 0 421 1 4 1020 1271 34 0 20 chr17 57017339 57017490 -38255161 - B1_Mus1 SINE Alu 0 148 1 4 1020 1208 128 16 5 chr17 57017666 57017855 -38254796 + B2_Mm2 SINE B2 1 191 -4 4 1020 766 136 8 8 chr17 57017938 57018057 -38254594 + PB1D9 SINE Alu 2 120 0 4 1020 207 0 0 0 chr17 57018073 57018096 -38254555 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1020 1279 27 0 0 chr17 57018096 57018243 -38254408 - B1_Mus2 SINE Alu 0 147 1 5 1020 482 198 42 25 chr17 57018282 57018401 -38254250 - B3 SINE B2 -95 121 1 5 1020 233 248 218 0 chr17 57018591 57018692 -38253959 - B4A SINE B4 -143 149 27 5 1020 1402 99 16 5 chr17 57018708 57018900 -38253751 - B2_Mm2 SINE B2 -1 194 1 5 1020 1212 61 0 0 chr17 57019122 57019269 -38253382 - B1_Mm SINE Alu 0 147 1 5 1020 651 193 11 11 chr17 57019486 57019664 -38252987 + (TGGG)n Simple_repeat Simple_repeat 3 180 0 5 1020 270 56 0 0 chr17 57020679 57020715 -38251936 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1020 198 0 0 0 chr17 57020905 57020927 -38251724 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1020 1238 55 0 0 chr17 57020927 57021073 -38251578 - B1_Mm SINE Alu 0 147 2 5 1020 764 176 117 19 chr17 57021076 57021238 -38251413 + B3 SINE B2 34 211 -5 6 1020 555 16 0 0 chr17 57021238 57021302 -38251349 + (CA)n Simple_repeat Simple_repeat 2 65 0 6 1020 510 242 214 18 chr17 57021302 57021470 -38251181 + ID_B1 SINE B4 6 206 -18 6 1020 240 247 11 69 chr17 57021408 57021495 -38251156 + B1_Mus2 SINE Alu 65 146 -1 6 1020 325 281 14 0 chr17 57021772 57021882 -38250769 - L1MB3 LINE L1 -281 5899 5787 6 1020 198 0 0 0 chr17 57022961 57022983 -38249668 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 6 1020 913 120 0 0 chr17 57023670 57023812 -38248839 - B1_Mur4 SINE Alu 0 150 9 6 1020 458 247 37 85 chr17 57023673 57023825 -38248826 - B4 SINE B4 -69 223 78 6 1020 416 291 26 0 chr17 57023825 57023942 -38248709 - PB1D7 SINE Alu 0 120 1 6 1020 458 247 37 85 chr17 57023942 57023953 -38248698 - B4 SINE B4 -215 77 68 6 1020 461 259 49 24 chr17 57024761 57025002 -38247649 + B4 SINE B4 2 292 0 6 1020 1062 88 0 0 chr17 57025039 57025175 -38247476 - B1_Mus2 SINE Alu -11 136 1 7 1020 333 264 118 0 chr17 57025230 57025340 -38247311 - RSINE1 SINE B4 -40 125 3 7 1020 541 160 47 0 chr17 57025644 57025750 -38246901 + RSINE1 SINE B4 4 114 -51 7 1020 384 257 20 10 chr17 57026235 57026337 -38246314 + PB1D10 SINE Alu 14 116 -1 7 1020 383 228 9 26 chr17 57026340 57026452 -38246199 + B4 SINE B4 1 109 -56 7 1020 660 221 139 5 chr17 57026498 57026685 -38245966 - B3 SINE B2 0 216 5 7 1020 859 124 0 14 chr17 57026709 57026848 -38245803 - B1_Mus2 SINE Alu 0 147 11 7 1020 533 237 0 86 chr17 57026848 57026884 -38245767 - ID_B1 SINE B4 0 224 65 7 1020 278 306 102 0 chr17 57026860 57026968 -38245683 + B4 SINE B4 105 223 -69 7 1020 708 221 7 0 chr17 57026989 57027125 -38245526 + B1_Mur2 SINE Alu 2 138 -11 7 1020 297 0 0 0 chr17 57027131 57027164 -38245487 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1020 419 242 129 34 chr17 57027221 57027406 -38245245 + B4 SINE B4 81 269 -23 7 1020 339 25 0 0 chr17 57027422 57027462 -38245189 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 1020 510 17 0 0 chr17 57027487 57027546 -38245105 + (GGAA)n Simple_repeat Simple_repeat 4 62 0 8 1020 636 206 105 35 chr17 57027569 57027740 -38244911 + B3A SINE B2 11 193 -5 8 1020 653 226 113 24 chr17 57028653 57028821 -38243830 - B3A SINE B2 -14 184 2 8 1020 536 228 134 0 chr17 57030043 57030192 -38242459 + ID_B1 SINE B4 3 171 -53 8 1020 879 57 186 0 chr17 57030448 57030572 -38242079 + B1_Mm SINE Alu 1 147 0 8 1020 333 287 53 69 chr17 57030599 57030730 -38241921 + MLT1A1 LTR MaLR 268 396 -12 8 1020 497 275 21 30 chr17 57031009 57031173 -38241478 + B3A SINE B2 4 164 -52 8 1020 230 330 106 0 chr17 57031194 57031288 -38241363 - B4 SINE B4 -181 111 8 8 1020 358 224 13 13 chr17 57034938 57035015 -38237636 - RSINE1 SINE B4 -74 91 15 9 1020 297 75 0 0 chr17 57035219 57035259 -38237392 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 1020 186 103 0 0 chr17 57037323 57037352 -38235299 + (TG)n Simple_repeat Simple_repeat 1 29 0 9 1020 1231 54 0 0 chr17 57043991 57044138 -38228513 + B1_Mm SINE Alu 1 147 0 9 1020 204 125 0 0 chr17 57044138 57044170 -38228481 + (A)n Simple_repeat Simple_repeat 1 32 0 9 1020 394 287 114 46 chr17 57045889 57045948 -38226703 - B4A SINE B4 -91 201 142 9 1020 2435 102 9 0 chr17 57045948 57046270 -38226381 + ORR1A3 LTR MaLR 2 326 0 9 1020 394 287 114 46 chr17 57046270 57046385 -38226266 - B4A SINE B4 -151 141 15 9 1020 274 319 14 0 chr17 57047260 57047349 -38225302 + ID4_ SINE ID 9 98 -54 9 1020 997 182 39 25 chr17 57048045 57048248 -38224403 + B3 SINE B2 10 215 -1 9 1020 2412 47 3 9 chr17 57049415 57049739 -38222912 + ORR1A1 LTR MaLR 1 322 -24 9 1020 723 322 25 5 chr17 57049907 57050107 -38222544 + B4A SINE B4 24 227 -65 1 1020 1314 154 43 5 chr17 57050112 57050320 -38222331 + B3 SINE B2 1 216 0 1 1020 281 251 2 16 chr17 57050373 57050444 -38222207 + B4A SINE B4 222 292 0 1 1020 597 175 35 28 chr17 57050623 57050764 -38221887 + B3 SINE B2 69 210 -6 1 1020 306 328 105 37 chr17 57051064 57051415 -38221236 + L1MC LINE L1 3597 3971 -2175 1 1020 309 299 252 33 chr17 57051723 57051965 -38220686 + L1MD LINE L1 3984 4278 -1868 1 1020 546 259 105 25 chr17 57052003 57052165 -38220486 + MTE2b LTR MaLR 16 190 -189 1 1020 293 268 14 0 chr17 57052200 57052271 -38220380 + RSINE1 SINE B4 63 134 -31 1 1020 285 188 0 80 chr17 57052300 57052375 -38220276 + RLTR25B LTR ERVK 434 502 -526 1 1020 759 50 0 0 chr17 57052318 57052419 -38220232 + B1_Mus2 SINE Alu 47 147 0 1 1020 513 208 167 0 chr17 57052434 57052554 -38220097 + B1_Mur1 SINE Alu 1 140 -9 1 1020 383 352 61 6 chr17 57052723 57052886 -38219765 + L1M4 LINE L1 5116 5287 -859 1 1020 326 341 89 31 chr17 57053578 57053802 -38218849 - MER82 DNA MER2_type -370 283 47 1 1020 711 94 256 0 chr17 57054000 57054117 -38218534 - B1_Mus1 SINE Alu 0 148 2 1 1020 313 303 0 13 chr17 57055922 57055999 -38216652 - HAL1-3A_ME LINE L1 -808 2050 1975 1 1020 236 233 0 0 chr17 57055999 57056042 -38216609 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1020 5395 70 18 0 chr17 57056045 57056732 -38215919 - L1_Mus3 LINE L1 0 6638 5940 1 1020 236 270 263 26 chr17 57057628 57057742 -38214909 + B4 SINE B4 109 249 -43 1 1020 266 0 29 0 chr17 57057754 57057788 -38214863 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1 1020 1341 74 11 0 chr17 57057793 57057968 -38214683 + B2_Mm1t SINE B2 2 178 -15 1 1020 350 117 351 18 chr17 57057997 57058108 -38214543 + B2_Mm2 SINE B2 47 194 -1 1 1020 441 304 48 8 chr17 57058162 57058288 -38214363 + RSINE1 SINE B4 4 134 -31 1 1020 466 358 80 0 chr17 57060629 57060780 -38211871 + RSINE1 SINE B4 3 165 0 1 1020 608 190 180 52 chr17 57060815 57060987 -38211664 + B3A SINE B2 2 195 -3 1 1020 329 239 0 8 chr17 57062066 57062184 -38210467 + (TGGA)n Simple_repeat Simple_repeat 3 119 0 1 1020 961 66 0 0 chr17 57062411 57062533 -38210118 + L1_Mur2 LINE L1 4007 4128 -1749 1 1020 2007 98 6 81 chr17 57062533 57062877 -38209774 + ORR1A3 LTR MaLR 1 318 -8 1 1020 5030 141 20 43 chr17 57062960 57063889 -38208762 + L1_Mur2 LINE L1 4166 5073 -804 1 1020 2573 248 24 43 chr17 57063892 57064677 -38207974 + Lx5 LINE L1 6455 7032 -18 1 1020 252 0 0 0 chr17 57064677 57064705 -38207946 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 1020 985 250 19 0 chr17 57064907 57065419 -38207232 + ZP3AR Satellite Satellite 1 521 -5 1 1020 931 244 157 19 chr17 57065822 57066236 -38206415 - Lx7 LINE L1 -4 7692 7222 1 1020 1025 169 144 5 chr17 57067409 57067611 -38205040 + MTD LTR MaLR 2 231 -188 1 1020 254 269 50 25 chr17 57067732 57067812 -38204839 - B4A SINE B4 -208 84 3 1 1020 280 276 25 38 chr17 57067836 57067915 -38204736 - B4 SINE B4 -2 290 213 1 1020 582 265 67 42 chr17 57067917 57068110 -38204541 - B3A SINE B2 0 198 1 1 1020 786 257 88 4 chr17 57068110 57068321 -38204330 - B4 SINE B4 -61 231 2 1 1020 471 18 0 0 chr17 57068329 57068385 -38204266 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1020 248 270 120 13 chr17 57068398 57068473 -38204178 - ID4_ SINE ID 0 83 1 1 1020 368 283 246 9 chr17 57068487 57068601 -38204050 - B1_Mur1 SINE Alu -7 142 2 1 1020 334 204 112 2 chr17 57068624 57068720 -38203931 - PB1D9 SINE Alu -7 113 10 1 1020 1149 69 7 0 chr17 57070318 57070463 -38202188 + B1_Mus1 SINE Alu 3 148 0 1 1020 223 28 0 53 chr17 57070463 57070501 -38202150 + (CAAAAA)n Simple_repeat Simple_repeat 6 41 0 1 1020 396 321 19 12 chr17 57070853 57071030 -38201621 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 1 1020 576 101 0 0 chr17 57071030 57071119 -38201532 + (TCCA)n Simple_repeat Simple_repeat 1 89 0 1 1020 221 351 26 19 chr17 57071119 57071156 -38201495 + (CCTA)n Simple_repeat Simple_repeat 3 37 0 1 1020 27 0 0 0 chr17 57074701 57074728 -38197923 + GC_rich Low_complexity Low_complexity 1 27 0 1 1020 30 69 0 0 chr17 57074778 57074836 -38197815 + GC_rich Low_complexity Low_complexity 1 58 0 1 1020 372 356 17 0 chr17 57075701 57075819 -38196832 + ID_B1 SINE B4 3 122 -102 1 1020 975 261 41 94 chr17 57075852 57076287 -38196364 - RLTR11B LTR ERVK -41 412 1 1 1020 369 162 122 0 chr17 57076917 57076991 -38195660 + PB1D7 SINE Alu 31 113 -7 1 1020 819 141 59 7 chr17 57077222 57077358 -38195293 - B1_Mur1 SINE Alu 0 149 7 1 1020 395 274 74 116 chr17 57077358 57077408 -38195243 - B4 SINE B4 -63 225 48 1 1020 412 269 65 0 chr17 57077382 57077490 -38195161 - PB1D7 SINE Alu 0 120 6 1 1020 625 241 15 40 chr17 57077499 57077698 -38194953 - B3A SINE B2 -1 197 4 1 1020 478 302 8 0 chr17 57078250 57078369 -38194282 + B3A SINE B2 1 120 -78 1 1020 794 247 124 9 chr17 57078370 57078603 -38194048 - ORR1D1 LTR MaLR 0 374 115 1 1020 299 255 50 69 chr17 57078621 57078722 -38193929 - RMER20A LTR ERVK -25 602 504 1 1020 482 219 0 103 chr17 57078781 57078898 -38193753 - RMER20B LTR ERVK -14 613 509 1 1020 3602 132 44 66 chr17 57078899 57079579 -38193072 + RMER19B LTR ERVK 1 665 -237 1 1020 6960 106 8 11 chr17 57079584 57080614 -38192037 - MurERV4_19-int LTR ERVK -967 4813 3787 1 1020 970 100 50 0 chr17 57080648 57080788 -38191863 - B1_Mus2 SINE Alu 0 147 1 1 1020 503 132 0 0 chr17 57080789 57080872 -38191779 - 4.5SRNA scRNA scRNA -2 92 10 1 1020 3874 114 0 15 chr17 57080879 57081466 -38191185 - MurERV4_19-int LTR ERVK -1993 3787 3210 1 1020 2604 77 9 0 chr17 57081466 57081790 -38190861 + ORR1A2 LTR MaLR 1 327 0 1 1020 9822 132 61 105 chr17 57081790 57083544 -38189107 + ORR1A2-int LTR MaLR 1 1823 -140 1 1020 441 0 0 0 chr17 57083544 57083593 -38189058 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 1 1020 9822 132 61 105 chr17 57083593 57083891 -38188760 + ORR1A2-int LTR MaLR 1824 1963 0 1 1020 2528 69 0 6 chr17 57083891 57084212 -38188439 + ORR1A2 LTR MaLR 1 319 -8 1 1020 17679 134 57 47 chr17 57084216 57087126 -38185525 - MurERV4_19-int LTR ERVK -2566 3214 214 1 1020 494 90 0 0 chr17 57087126 57087193 -38185458 + B1_Mus2 SINE Alu 81 147 0 1 1020 17679 134 57 47 chr17 57087193 57087398 -38185253 - MurERV4_19-int LTR ERVK -2566 213 1 1 1020 4125 143 104 85 chr17 57087398 57087534 -38185117 - RMER19B LTR ERVK 0 902 770 1 1020 186 71 0 0 chr17 57087534 57087562 -38185089 + (TTGG)n Simple_repeat Simple_repeat 1 28 0 1 1020 4125 143 104 85 chr17 57087562 57088310 -38184341 - RMER19B LTR ERVK -133 769 1 1 1020 436 259 93 71 chr17 57088345 57088764 -38183887 - RMER20A LTR ERVK -161 466 1 1 1020 1158 195 52 34 chr17 57088764 57089176 -38183475 - RMER4B LTR ERVK -43 542 17 1 1020 512 180 54 9 chr17 57089184 57089296 -38183355 - ORR1D1 LTR MaLR -257 117 1 1 1020 306 0 0 0 chr17 57089343 57089377 -38183274 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1020 785 207 0 41 chr17 57089393 57089539 -38183112 + B1_Mus2 SINE Alu 8 147 0 1 1020 560 246 8 8 chr17 57089571 57089690 -38182961 - PB1D9 SINE Alu -1 119 1 1 1020 215 344 139 0 chr17 57089764 57089886 -38182765 + B1F1 SINE Alu 2 140 -9 1 1020 370 208 117 0 chr17 57089818 57089895 -38182756 + ID_B1 SINE B4 139 224 0 1 1020 202 281 15 15 chr17 57089899 57089964 -38182687 + GA-rich Low_complexity Low_complexity 4 68 0 1 1020 3328 51 5 0 chr17 57089991 57090385 -38182266 - MTA_Mm LTR MaLR 0 396 1 1 1020 258 32 0 0 chr17 57090857 57090888 -38181763 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1 1020 415 304 0 111 chr17 57090894 57090949 -38181702 + B1F SINE Alu 7 60 -89 1 1020 1167 68 0 0 chr17 57090949 57091096 -38181555 + B1_Mus1 SINE Alu 2 148 0 1 1020 415 304 0 111 chr17 57091096 57091166 -38181485 + B1F SINE Alu 61 118 -31 1 1020 936 126 0 0 chr17 57091227 57091378 -38181273 + (TTTC)n Simple_repeat Simple_repeat 2 152 0 1 1020 640 151 19 0 chr17 57091378 57091484 -38181167 - ID_B1 SINE B4 -11 213 106 1 1020 369 194 0 169 chr17 57091625 57091743 -38180908 + MT2B LTR ERVL 160 257 -344 1 1020 896 160 0 14 chr17 57091643 57091789 -38180862 + B1_Mur4 SINE Alu 6 149 -1 1 1020 1340 90 17 0 chr17 57091896 57092073 -38180578 + B2_Mm2 SINE B2 1 180 -15 1 1020 642 26 0 0 chr17 57092073 57092149 -38180502 + (GAAA)n Simple_repeat Simple_repeat 1 76 0 1 1020 244 209 0 0 chr17 57092240 57092283 -38180368 + MIRm SINE MIR 87 129 -147 1 1020 391 296 0 0 chr17 57092410 57092518 -38180133 + PB1D10 SINE Alu 2 109 -8 1 1020 758 207 179 0 chr17 57092925 57093104 -38179547 - B3 SINE B2 -5 211 1 1 1020 1233 55 0 0 chr17 57093141 57093287 -38179364 + B1_Mm SINE Alu 2 147 0 1 1020 427 316 71 29 chr17 57093333 57093473 -38179178 - RSINE1 SINE B4 -17 148 3 1 1020 241 293 0 26 chr17 57093508 57093585 -38179066 + GA-rich Low_complexity Low_complexity 1 75 0 1 1020 666 109 0 0 chr17 57093585 57093686 -38178965 + (TGGA)n Simple_repeat Simple_repeat 1 101 0 1 1020 245 200 19 28 chr17 57095128 57095236 -38177415 + (TGGG)n Simple_repeat Simple_repeat 4 110 0 1 1020 278 106 21 0 chr17 57095240 57095287 -38177364 + (TGGA)n Simple_repeat Simple_repeat 3 50 0 1 1020 342 268 17 26 chr17 57095685 57095800 -38176851 + PB1D9 SINE Alu 1 114 -6 1 1020 726 131 0 0 chr17 57095836 57095981 -38176670 + (TC)n Simple_repeat Simple_repeat 2 146 0 1 1020 513 32 0 0 chr17 57095981 57096044 -38176607 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 1020 354 80 0 0 chr17 57096285 57096335 -38176316 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1020 374 219 12 0 chr17 57096976 57097058 -38175593 + RSINE1 SINE B4 4 86 -79 1 1020 31 0 0 0 chr17 57097079 57097110 -38175541 + AT_rich Low_complexity Low_complexity 1 31 0 1 1020 1004 132 0 0 chr17 57097115 57097259 -38175392 - B1_Mur4 SINE Alu -1 149 6 1 1020 273 125 0 0 chr17 57098213 57098269 -38174382 + (T)n Simple_repeat Simple_repeat 1 56 0 1 1020 838 206 0 7 chr17 57098851 57098998 -38173653 - B1_Mur2 SINE Alu -1 148 3 2 1020 247 162 0 0 chr17 57098965 57099002 -38173649 - MT2B2 LTR ERVL -292 292 256 2 1020 525 220 30 0 chr17 57099045 57099145 -38173506 + B1_Mur2 SINE Alu 22 124 -25 2 1020 495 0 0 0 chr17 57099145 57099200 -38173451 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 1020 517 277 27 13 chr17 57099241 57099391 -38173260 - ZP3AR Satellite Satellite -24 188 37 2 1020 1319 103 16 5 chr17 57099593 57099779 -38172872 + B2_Mm2 SINE B2 2 189 -6 2 1020 493 194 42 21 chr17 57099791 57099886 -38172765 + PB1D9 SINE Alu 7 103 -17 2 1020 477 90 0 0 chr17 57099886 57099953 -38172698 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 2 1020 1231 48 0 7 chr17 57099955 57100102 -38172549 - B1_Mus2 SINE Alu 0 147 2 2 1020 894 162 42 0 chr17 57100130 57100272 -38172379 + B1_Mur3 SINE Alu 2 149 0 2 1020 198 0 0 0 chr17 57100282 57100304 -38172347 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 1020 218 184 169 84 chr17 57100359 57100442 -38172209 + PB1D7 SINE Alu 31 120 0 2 1020 534 239 17 17 chr17 57100559 57100678 -38171973 + RSINE1 SINE B4 3 121 -44 2 1020 366 261 147 9 chr17 57100673 57100789 -38171862 + MTEb LTR MaLR 243 374 -5 2 1020 287 307 118 49 chr17 57100929 57101073 -38171578 + MLT1J LTR MaLR 97 250 -262 2 1020 442 276 19 0 chr17 57101105 57101210 -38171441 - PB1D7 SINE Alu -5 115 9 2 1020 367 231 26 0 chr17 57101241 57101319 -38171332 - ID_B1 SINE B4 -58 166 87 2 1020 872 169 118 11 chr17 57101392 57101578 -38171073 + B3 SINE B2 5 210 -6 2 1020 728 298 42 4 chr17 57101642 57101878 -38170773 - B4A SINE B4 -45 247 3 2 1020 2274 92 25 16 chr17 57102206 57102528 -38170123 + ORR1A4 LTR MaLR 5 329 0 2 1020 198 312 88 44 chr17 57102703 57102817 -38169834 + MIRm SINE MIR 33 151 -125 2 1020 235 186 0 0 chr17 57102917 57102960 -38169691 + PB1 SINE Alu 21 63 -64 2 1020 306 253 106 11 chr17 57102979 57103071 -38169580 + B4 SINE B4 1 102 -190 2 1020 709 282 53 70 chr17 57103117 57103556 -38169095 + RLTR12B LTR ERVK 1 322 -37 2 1020 1163 69 7 0 chr17 57104236 57104380 -38168271 + B1_Mus2 SINE Alu 3 147 0 2 1020 671 336 42 55 chr17 57104603 57104789 -38167862 + MYSERV-int LTR ERVK 976 1165 -7794 2 1020 1223 61 0 0 chr17 57104789 57104936 -38167715 + B1_Mm SINE Alu 1 147 0 2 1020 671 336 42 55 chr17 57104936 57105135 -38167516 + MYSERV-int LTR ERVK 1166 1353 -7606 2 1020 1212 80 68 6 chr17 57105135 57105312 -38167339 + B2_Mm2 SINE B2 5 192 -3 2 1020 671 336 42 55 chr17 57105312 57105381 -38167270 + MYSERV-int LTR ERVK 1354 1424 -7535 2 1020 974 130 7 0 chr17 57105389 57105535 -38167116 + B2_Mm2 SINE B2 2 148 -47 2 1020 371 36 0 52 chr17 57105565 57105623 -38167028 + B2_Mm1t SINE B2 130 184 -9 2 1020 11403 252 75 44 chr17 57105859 57108582 -38164069 + MYSERV-int LTR ERVK 1315 4170 -2380 2 1020 269 69 16 65 chr17 57108582 57108644 -38164007 + B2_Mm1t SINE B2 135 193 0 2 1020 11403 252 75 44 chr17 57108644 57109506 -38163145 + MYSERV-int LTR ERVK 4171 5076 -1474 2 1020 2860 173 196 13 chr17 57109511 57110148 -38162503 + MYSERV-int LTR ERVK 5776 6529 -21 2 1020 587 284 35 61 chr17 57110159 57110525 -38162126 + RLTR12B LTR ERVK 4 366 -202 2 1020 307 256 11 137 chr17 57110689 57110784 -38161867 + RSINE1 SINE B4 82 164 -1 2 1020 429 281 27 67 chr17 57110854 57111003 -38161648 + RSINE1 SINE B4 23 165 0 2 1020 1088 262 67 64 chr17 57111241 57111616 -38161035 + Lx6 LINE L1 6881 7256 -204 2 1020 593 225 0 70 chr17 57111619 57111637 -38161014 - PB1D9 SINE Alu 0 120 108 2 1020 198 0 0 0 chr17 57111637 57111659 -38160992 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 2 1020 593 225 0 70 chr17 57111659 57111769 -38160882 - PB1D9 SINE Alu -13 107 1 2 1020 201 162 0 0 chr17 57111770 57111807 -38160844 + T-rich Low_complexity Low_complexity 4 40 0 2 1020 180 125 0 0 chr17 57111807 57111839 -38160812 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 2 1020 360 348 14 14 chr17 57111878 57112021 -38160630 + Lx7 LINE L1 7193 7335 -361 2 1020 34 46 0 15 chr17 57112162 57112194 -38160457 + AT_rich Low_complexity Low_complexity 1 32 0 2 1020 3623 94 41 58 chr17 57112194 57112609 -38160042 + Lx3A LINE L1 6398 6835 -146 2 1020 1740 16 0 0 chr17 57112609 57112801 -38159850 + B2_Mm1a SINE B2 2 193 0 2 1020 3623 94 41 58 chr17 57112801 57112972 -38159679 + Lx3A LINE L1 6836 6974 -7 2 1020 34 46 0 15 chr17 57112972 57113005 -38159646 + AT_rich Low_complexity Low_complexity 1 33 0 2 1020 272 231 139 13 chr17 57113015 57113094 -38159557 + PB1D9 SINE Alu 2 90 -30 2 1020 1106 232 72 116 chr17 57113099 57113248 -38159403 - MTD LTR MaLR -14 405 239 2 1020 399 41 0 0 chr17 57113248 57113297 -38159354 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1020 1106 232 72 116 chr17 57113297 57113368 -38159283 - MTD LTR MaLR -181 238 210 2 1020 1270 47 0 0 chr17 57113368 57113516 -38159135 - B1_Mus1 SINE Alu 0 148 1 2 1020 1106 232 72 116 chr17 57113516 57113708 -38158943 - MTD LTR MaLR -210 209 10 2 1020 234 62 0 0 chr17 57113723 57113755 -38158896 + (GAAAA)n Simple_repeat Simple_repeat 3 34 0 2 1020 709 207 66 22 chr17 57113832 57114068 -38158583 + ZP3AR Satellite Satellite 1 246 -9 2 1020 237 245 14 0 chr17 57114445 57114524 -38158127 + MIRm SINE MIR 43 127 -149 2 1020 333 258 18 2 chr17 57114541 57114629 -38158022 + PB1D10 SINE Alu 10 100 -20 2 1020 585 223 38 8 chr17 57114814 57114945 -38157706 - RSINE1 SINE B4 -21 144 10 2 1020 669 118 82 0 chr17 57115003 57115113 -38157538 - B1_Mur2 SINE Alu 0 149 31 2 1020 229 240 0 0 chr17 57115162 57115212 -38157439 + ID_B1 SINE B4 115 164 -60 2 1020 642 296 80 66 chr17 57115562 57115629 -38157022 + B4 SINE B4 3 136 -156 2 1020 718 232 0 14 chr17 57115629 57115773 -38156878 + B1_Mus1 SINE Alu 2 143 -5 2 1020 642 296 80 66 chr17 57115773 57115848 -38156803 + B4 SINE B4 137 292 0 2 1020 600 243 24 86 chr17 57116286 57116521 -38156130 + B3A SINE B2 1 216 0 2 1020 214 333 15 0 chr17 57116794 57116860 -38155791 - PB1D9 SINE Alu -51 69 3 2 1020 421 241 32 96 chr17 57116879 57116890 -38155761 - L1MCa LINE L1 -4537 1971 1961 2 1020 601 244 0 49 chr17 57116890 57117032 -38155619 + B1_Mur2 SINE Alu 5 139 -10 2 1020 421 260 37 83 chr17 57117032 57117222 -38155429 - L1MCa LINE L1 -4545 1963 1825 2 1020 393 252 36 27 chr17 57117228 57117338 -38155313 + PB1D7 SINE Alu 7 117 -3 2 1020 1555 136 132 7 chr17 57117506 57117794 -38154857 + ORR1B2 LTR MaLR 1 324 -43 2 1020 2145 252 31 23 chr17 57117810 57118322 -38154329 + Lx6 LINE L1 6945 7460 0 2 1020 222 176 0 121 chr17 57118458 57118516 -38154135 - PB1D7 SINE Alu -2 118 68 2 1020 269 280 55 83 chr17 57118464 57118573 -38154078 - ID_B1 SINE B4 -7 217 112 2 1020 485 258 31 31 chr17 57118861 57118989 -38153662 - ID_B1 SINE B4 -1 223 96 2 1020 201 231 0 0 chr17 57118994 57119033 -38153618 + CT-rich Low_complexity Low_complexity 1 39 0 2 1020 388 265 71 29 chr17 57119037 57119177 -38153474 - B1F SINE Alu -3 146 1 2 1020 291 104 0 0 chr17 57119239 57119287 -38153364 + (C)n Simple_repeat Simple_repeat 1 48 0 2 1020 331 204 62 163 chr17 57119455 57119584 -38153067 + PB1D10 SINE Alu 2 117 0 2 1020 528 184 44 8 chr17 57119979 57120121 -38152530 - ZP3AR Satellite Satellite -5 207 30 2 1020 342 0 0 0 chr17 57120176 57120214 -38152437 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 2 1020 559 188 10 10 chr17 57120217 57120319 -38152332 - PB1D9 SINE Alu -15 105 4 2 1020 349 309 54 9 chr17 57120225 57120336 -38152315 - B4 SINE B4 -105 187 72 2 1020 228 244 122 44 chr17 57120316 57120406 -38152245 - PB1D10 SINE Alu -2 115 19 2 1020 321 131 0 0 chr17 57120451 57120512 -38152139 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1020 218 299 52 0 chr17 57120642 57120719 -38151932 + MIRb SINE MIR 178 258 -10 2 1020 210 324 38 9 chr17 57120720 57120826 -38151825 + PB1D10 SINE Alu 3 111 -6 2 1020 464 307 21 26 chr17 57121858 57121902 -38150749 + ID SINE ID 26 70 -154 2 1020 374 275 46 0 chr17 57121902 57122011 -38150640 + PB1D7 SINE Alu 1 114 -6 2 1020 464 307 21 26 chr17 57122011 57122035 -38150616 + ID_B1 SINE B4 71 217 -7 2 1020 833 112 8 0 chr17 57122035 57122160 -38150491 + B1_Mur3 SINE Alu 18 143 -6 2 1020 32 0 0 0 chr17 57122173 57122205 -38150446 + AT_rich Low_complexity Low_complexity 1 32 0 2 1020 403 168 84 41 chr17 57122225 57122337 -38150314 + B1F SINE Alu 1 148 -1 2 1020 1461 83 5 0 chr17 57122337 57122529 -38150122 + B2_Mm1a SINE B2 1 193 0 2 1020 237 312 26 13 chr17 57122561 57122639 -38150012 + ID4_ SINE ID 2 80 -3 2 1020 311 307 85 93 chr17 57122602 57122850 -38149801 + RMER12 LTR ERVK 742 987 -335 2 1020 460 243 0 13 chr17 57122904 57123054 -38149597 + (TATATG)n Simple_repeat Simple_repeat 5 152 0 2 1020 475 206 0 49 chr17 57123084 57123268 -38149383 + (TATATG)n Simple_repeat Simple_repeat 6 180 0 2 1020 363 178 13 0 chr17 57123324 57123397 -38149254 - B1_Mus1 SINE Alu -26 94 18 2 1020 351 0 0 0 chr17 57123414 57123453 -38149198 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1020 257 268 44 44 chr17 57123453 57123543 -38149108 - RSINE1 SINE B4 -8 157 68 2 1020 301 348 94 30 chr17 57123612 57123879 -38148772 - B4A SINE B4 -8 284 1 2 1020 320 275 158 81 chr17 57123879 57124087 -38148564 - B4A SINE B4 -61 231 7 2 1020 284 333 11 0 chr17 57124076 57124166 -38148485 - ID_B1 SINE B4 -51 173 83 2 1020 687 75 0 0 chr17 57124171 57124265 -38148386 + (TC)n Simple_repeat Simple_repeat 2 95 0 2 1020 332 317 26 65 chr17 57124297 57124452 -38148199 - B3A SINE B2 -13 185 37 2 1020 389 241 36 0 chr17 57124549 57124632 -38148019 + ID_B1 SINE B4 84 169 -55 2 1020 401 188 25 12 chr17 57124720 57124801 -38147850 - RSINE1 SINE B4 -31 134 53 2 1020 225 246 14 42 chr17 57124930 57124990 -38147661 + ID_B1 SINE B4 152 212 -12 2 1020 311 0 26 0 chr17 57124990 57125029 -38147622 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 2 1020 225 246 14 42 chr17 57125029 57125040 -38147611 + ID_B1 SINE B4 213 221 -3 2 1020 766 133 117 0 chr17 57125048 57125176 -38147475 + B1_Mur3 SINE Alu 2 144 -5 2 1020 229 292 150 0 chr17 57125397 57125510 -38147141 + RMER15 LTR ERVL 432 561 -14 2 1020 363 247 62 8 chr17 57125536 57125578 -38147073 - PB1D7 SINE Alu 0 149 32 3 1020 428 169 0 35 chr17 57125578 57125664 -38146987 - ID_B1 SINE B4 -51 173 91 3 1020 396 179 295 0 chr17 57125939 57126051 -38146600 + B1F SINE Alu 5 149 0 3 1020 1336 50 15 109 chr17 57126159 57126199 -38146452 + B2_Mm2 SINE B2 2 41 -154 3 1020 1681 31 0 0 chr17 57126199 57126390 -38146261 + B2_Mm1a SINE B2 2 192 -1 3 1020 1336 50 15 109 chr17 57126390 57126550 -38146101 + B2_Mm2 SINE B2 42 183 -12 3 1020 234 0 0 0 chr17 57126550 57126576 -38146075 + (GGA)n Simple_repeat Simple_repeat 3 28 0 3 1020 381 222 100 0 chr17 57126675 57126765 -38145886 + PB1D7 SINE Alu 1 99 -21 3 1020 568 277 66 22 chr17 57126761 57126942 -38145709 + B3A SINE B2 10 198 0 3 1020 654 226 0 7 chr17 57126993 57127131 -38145520 - B1_Mur2 SINE Alu -1 148 12 3 1020 691 183 0 38 chr17 57127133 57127252 -38145399 + B1_Mus2 SINE Alu 1 115 -32 3 1020 315 0 0 0 chr17 57127252 57127287 -38145364 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1020 691 183 0 38 chr17 57127287 57127298 -38145353 + B1_Mus2 SINE Alu 116 126 -21 3 1020 252 200 0 0 chr17 57127383 57127423 -38145228 - B1_Mus2 SINE Alu -105 42 3 3 1020 1193 37 0 0 chr17 57127452 57127587 -38145064 - B1_Mm SINE Alu -12 135 1 3 1020 1841 265 200 35 chr17 57127744 57128454 -38144197 - Lx8 LINE L1 -339 7134 6307 3 1020 973 97 7 0 chr17 57128712 57128857 -38143794 + B2_Mm1t SINE B2 35 180 -13 3 1020 21 0 0 0 chr17 57130247 57130268 -38142383 + AT_rich Low_complexity Low_complexity 1 21 0 3 1020 237 167 167 0 chr17 57130410 57130464 -38142187 - ID_B1 SINE B4 -1 223 161 3 1020 987 117 7 20 chr17 57130913 57131061 -38141590 + B1_Mus2 SINE Alu 1 146 -1 3 1020 189 74 0 0 chr17 57131067 57131094 -38141557 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 3 1020 186 191 0 0 chr17 57131104 57131146 -38141505 + A-rich Low_complexity Low_complexity 1 42 0 3 1020 729 250 112 0 chr17 57131150 57131346 -38141305 - B4A SINE B4 -74 218 1 3 1020 1123 75 7 7 chr17 57131491 57131639 -38141012 + B1_Mus1 SINE Alu 1 148 0 3 1020 221 0 0 33 chr17 57131639 57131669 -38140982 + (GAAAA)n Simple_repeat Simple_repeat 4 32 0 3 1020 303 298 0 166 chr17 57131711 57131880 -38140771 - RSINE1 SINE B4 0 165 25 3 1020 407 257 9 0 chr17 57132498 57132603 -38140048 - B1_Mur2 SINE Alu -1 148 43 3 1020 383 260 166 96 chr17 57132621 57132709 -38139942 + ID_B1 SINE B4 3 103 -121 3 1020 479 198 0 65 chr17 57132709 57132817 -38139834 + PB1D9 SINE Alu 3 103 -17 3 1020 281 200 96 100 chr17 57133349 57133478 -38139173 + ZP3AR Satellite Satellite 1 128 -39 3 1020 271 244 46 58 chr17 57133516 57133527 -38139124 - B4 SINE B4 -206 86 1 3 1020 405 184 40 0 chr17 57133527 57133603 -38139048 - B3A SINE B2 -119 79 1 3 1020 265 232 99 20 chr17 57133731 57133832 -38138819 + PB1D7 SINE Alu 1 109 -11 3 1020 1117 96 0 23 chr17 57133898 57134069 -38138582 - B2_Mm2 SINE B2 -27 168 2 3 1020 1001 45 0 0 chr17 57134078 57134210 -38138441 - B1_Mm SINE Alu 0 147 16 3 1020 225 0 0 0 chr17 57134211 57134236 -38138415 + (CCCCCA)n Simple_repeat Simple_repeat 2 26 0 3 1020 544 310 7 7 chr17 57134279 57134425 -38138226 - RSINE1 SINE B4 -17 148 3 3 1020 270 273 91 0 chr17 57134525 57134602 -38138049 - RSINE1 SINE B4 -14 151 68 3 1020 286 280 27 99 chr17 57134656 57134719 -38137932 + PB1D7 SINE Alu 18 120 0 3 1020 301 146 0 0 chr17 57134719 57134767 -38137884 + ID_B1 SINE B4 177 224 0 3 1020 511 198 85 0 chr17 57135684 57135790 -38136861 - B1_Mus2 SINE Alu -32 115 1 3 1020 265 227 67 0 chr17 57135852 57135927 -38136724 - B3A SINE B2 -10 188 109 3 1020 236 233 32 85 chr17 57136210 57136304 -38136347 - RSINE1 SINE B4 -17 148 60 3 1020 207 196 0 0 chr17 57138717 57138763 -38133888 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 3 1020 338 291 35 52 chr17 57140228 57140344 -38132307 + RSINE1 SINE B4 52 165 0 3 1020 544 233 211 17 chr17 57140379 57140554 -38132097 + ID_B1 SINE B4 16 224 0 3 1020 305 260 48 39 chr17 57141175 57141279 -38131372 + PB1D10 SINE Alu 1 105 -44 3 1020 262 122 41 0 chr17 57141475 57141524 -38131127 + ZP3AR Satellite Satellite 21 71 -141 3 1020 1194 50 0 0 chr17 57141628 57141767 -38130884 + B1_Mus2 SINE Alu 3 141 -6 3 1020 198 0 0 0 chr17 57141770 57141792 -38130859 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1020 5882 96 77 11 chr17 57141792 57142680 -38129971 + Lx2A LINE L1 6053 6998 -10 3 1020 231 114 0 0 chr17 57142707 57142742 -38129909 + (GGGA)n Simple_repeat Simple_repeat 3 37 0 3 1020 246 182 0 98 chr17 57143764 57143825 -38128826 + polypyrimidine Low_complexity Low_complexity 2 56 0 3 1020 498 223 59 26 chr17 57144290 57144442 -38128209 - ZP3AR Satellite Satellite -34 178 22 3 1020 1217 48 7 0 chr17 57144528 57144675 -38127976 + B1_Mus1 SINE Alu 1 148 0 3 1020 824 177 7 26 chr17 57145441 57145592 -38127059 - B1_Mur2 SINE Alu 0 149 2 3 1020 503 275 53 0 chr17 57145606 57145737 -38126914 - B1F2 SINE Alu -8 141 4 3 1021 614 282 135 13 chr17 57147450 57147680 -38124971 + B4A SINE B4 2 259 -33 3 1021 420 237 31 0 chr17 57147665 57147762 -38124889 + RSINE1 SINE B4 31 130 -35 3 1021 300 219 12 88 chr17 57147803 57147883 -38124768 + B4A SINE B4 219 292 0 3 1021 437 200 8 11 chr17 57148099 57148200 -38124451 - PB1D10 SINE Alu -22 127 28 3 1021 557 192 144 15 chr17 57148236 57148368 -38124283 - B1_Mur2 SINE Alu 0 149 1 3 1021 1125 90 0 0 chr17 57148536 57148680 -38123971 + B1_Mus1 SINE Alu 2 145 -3 3 1021 226 308 88 0 chr17 57148712 57148803 -38123848 - B1_Mm SINE Alu -41 106 8 3 1021 543 296 63 0 chr17 57148723 57148882 -38123769 - ID_B1 SINE B4 -49 175 7 3 1021 324 275 37 38 chr17 57148907 57149013 -38123638 - PB1D10 SINE Alu 0 117 12 3 1021 701 162 99 0 chr17 57149290 57149432 -38123219 - URR1B DNA MER1_type -10 215 60 3 1021 180 0 0 0 chr17 57149466 57149486 -38123165 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 3 1021 249 148 18 18 chr17 57149569 57149624 -38123027 + GA-rich Low_complexity Low_complexity 2 56 0 3 1021 1205 62 0 0 chr17 57149675 57149821 -38122830 + B1_Mus1 SINE Alu 3 148 0 3 1021 221 156 44 0 chr17 57149987 57150032 -38122619 + ID4_ SINE ID 1 47 -36 3 1021 846 186 20 14 chr17 57150116 57150263 -38122388 - B1_Mur2 SINE Alu 0 149 2 3 1021 629 193 126 23 chr17 57152350 57152525 -38120126 + B3 SINE B2 24 216 0 3 1021 233 204 111 0 chr17 57152535 57152589 -38120062 + ID_B1 SINE B4 31 90 -134 3 1021 287 224 29 15 chr17 57152639 57152707 -38119944 + RSINE1 SINE B4 3 71 -94 3 1021 955 122 14 7 chr17 57152812 57152952 -38119699 + B1_Mur4 SINE Alu 1 141 -9 3 1021 217 277 0 0 chr17 57153014 57153061 -38119590 + polypurine Low_complexity Low_complexity 3 49 0 3 1021 418 265 41 0 chr17 57153063 57153161 -38119490 + PB1D10 SINE Alu 1 102 -15 3 1021 245 169 113 84 chr17 57153366 57153437 -38119214 + ID_B1 SINE B4 86 158 -66 3 1021 274 214 70 14 chr17 57153454 57153525 -38119126 + B1_Mm SINE Alu 22 96 -51 3 1021 251 265 153 0 chr17 57153460 57153558 -38119093 + ID_B1 SINE B4 109 221 -3 3 1021 225 242 76 0 chr17 57153672 57153738 -38118913 + B1F2 SINE Alu 30 100 -49 3 1021 480 274 102 18 chr17 57153738 57153905 -38118746 + B3A SINE B2 4 184 -14 3 1021 894 234 30 5 chr17 57154389 57154587 -38118064 - ID_B1 SINE B4 -19 205 3 3 1021 432 207 83 69 chr17 57154626 57154771 -38117880 + B1F SINE Alu 1 147 -2 3 1021 470 244 16 45 chr17 57155115 57155248 -38117403 - ID_B1 SINE B4 -17 207 82 3 1021 608 261 38 32 chr17 57155259 57155417 -38117234 - B3 SINE B2 -45 171 13 3 1021 870 167 28 0 chr17 57155484 57155628 -38117023 - B1_Mus1 SINE Alu 0 148 1 3 1021 267 240 256 60 chr17 57155789 57155922 -38116729 + RSINE1 SINE B4 1 159 -6 3 1021 1133 114 33 43 chr17 57156248 57156432 -38116219 + B2_Mm2 SINE B2 1 182 -13 3 1021 1182 114 51 0 chr17 57156432 57156608 -38116043 + B2_Mm1t SINE B2 2 186 -7 3 1021 1224 60 121 0 chr17 57156615 57156781 -38115870 + B2_Mm2 SINE B2 2 187 -8 3 1021 828 180 28 21 chr17 57156821 57156963 -38115688 + B1_Mur3 SINE Alu 2 144 -5 3 1021 521 251 168 24 chr17 57157008 57157175 -38115476 + B3A SINE B2 5 195 -3 3 1021 1079 82 0 0 chr17 57157179 57157313 -38115338 + B1_Mus1 SINE Alu 2 135 -13 3 1021 1468 69 21 0 chr17 57157314 57157502 -38115149 - B2_Mm1a SINE B2 0 193 2 3 1021 216 0 0 0 chr17 57157523 57157547 -38115104 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 3 1021 478 296 0 17 chr17 57157571 57157688 -38114963 + RSINE1 SINE B4 20 134 -31 3 1021 389 190 119 10 chr17 57158020 57158034 -38114617 + B1_Mur2 SINE Alu 38 51 -98 3 1021 402 226 67 19 chr17 57158034 57158138 -38114513 + PB1D10 SINE Alu 3 111 -6 3 1021 389 190 119 10 chr17 57158138 57158224 -38114427 + B1_Mur2 SINE Alu 52 149 0 3 1021 288 299 11 0 chr17 57158372 57158459 -38114192 + PB1D10 SINE Alu 7 94 -23 3 1021 470 271 199 0 chr17 57158464 57158630 -38114021 + B4 SINE B4 1 199 -93 3 1021 558 209 17 1 chr17 57158630 57158753 -38113898 + B3A SINE B2 44 166 -50 3 1021 426 208 93 9 chr17 57159114 57159221 -38113430 - B1F SINE Alu -21 128 13 4 1021 266 310 15 80 chr17 57159150 57159287 -38113364 - MT2B LTR ERVL -360 241 114 4 1021 312 274 30 40 chr17 57160719 57160818 -38111833 + L1MEg LINE L1 2413 2510 -4123 4 1021 216 135 0 0 chr17 57161438 57161475 -38111176 + (GGA)n Simple_repeat Simple_repeat 1 37 0 4 1021 261 248 39 67 chr17 57161567 57161671 -38110980 - MIRc SINE MIR -53 215 115 4 1021 1188 47 0 26 chr17 57165638 57165790 -38106861 - B1_Mus1 SINE Alu 0 148 1 4 1021 418 283 151 7 chr17 57166009 57166148 -38106503 + RSINE1 SINE B4 3 161 -4 4 1021 280 206 31 16 chr17 57166735 57166799 -38105852 - ID_B1 SINE B4 -44 180 116 4 1021 716 118 244 0 chr17 57167612 57167731 -38104920 - B1_Mus1 SINE Alu 0 148 1 4 1021 654 49 0 0 chr17 57167921 57168003 -38104648 + (TTTC)n Simple_repeat Simple_repeat 4 85 0 4 1021 1221 36 0 0 chr17 57168038 57168178 -38104473 - B1_Mus1 SINE Alu -8 140 1 4 1021 680 120 248 0 chr17 57168180 57168297 -38104354 - B1_Mus1 SINE Alu 0 148 3 4 1021 230 207 0 35 chr17 57170470 57170555 -38102096 + C-rich Low_complexity Low_complexity 2 83 0 4 1021 44 94 0 0 chr17 57170670 57170798 -38101853 + GC_rich Low_complexity Low_complexity 1 128 0 4 1021 250 290 0 28 chr17 57172091 57172162 -38100489 - ID4_ SINE ID -14 69 1 4 1021 660 265 108 0 chr17 57172732 57172917 -38099734 - ID_B1 SINE B4 -14 210 6 4 1021 279 315 9 9 chr17 57173334 57173443 -38099208 + PB1D10 SINE Alu 1 109 -8 4 1021 758 211 7 7 chr17 57173451 57173594 -38099057 + B1_Mur1 SINE Alu 1 143 -6 4 1021 507 135 0 103 chr17 57173597 57173704 -38098947 + B1_Mus2 SINE Alu 52 147 0 4 1021 414 202 26 0 chr17 57173709 57173795 -38098856 + B3A SINE B2 2 89 -127 4 1021 905 138 0 0 chr17 57173821 57173959 -38098692 + B2_Mm2 SINE B2 27 164 -31 4 1021 1201 62 0 0 chr17 57173966 57174111 -38098540 + B1_Mus2 SINE Alu 1 145 -2 4 1021 459 0 0 0 chr17 57174111 57174162 -38098489 + (GA)n Simple_repeat Simple_repeat 2 52 0 4 1021 417 205 0 0 chr17 57174608 57174686 -38097965 + PB1D10 SINE Alu 33 110 -7 4 1021 646 255 60 40 chr17 57174688 57174888 -38097763 + ID_B1 SINE B4 3 206 -18 4 1021 484 236 68 45 chr17 57174899 57175032 -38097619 - B1_Mur1 SINE Alu -5 144 9 4 1021 400 227 13 90 chr17 57175069 57175224 -38097427 + ID_B1 SINE B4 69 211 -13 4 1021 746 136 14 54 chr17 57175090 57175238 -38097413 + B1_Mus1 SINE Alu 6 147 -1 4 1021 312 214 29 0 chr17 57175298 57175368 -38097283 - ID_B1 SINE B4 -5 219 148 4 1021 425 258 0 0 chr17 57175356 57175445 -38097206 + ID_B1 SINE B4 134 222 -2 4 1021 276 310 155 0 chr17 57175448 57175590 -38097061 + RSINE1 SINE B4 2 165 0 4 1021 257 330 77 10 chr17 57175519 57175623 -38097028 + B3 SINE B2 105 215 -1 4 1021 475 16 15 15 chr17 57175739 57175804 -38096847 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1021 1085 69 7 40 chr17 57175829 57175980 -38096671 + B1_Mus1 SINE Alu 1 146 -2 4 1021 252 0 0 0 chr17 57175980 57176008 -38096643 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 4 1021 648 230 7 20 chr17 57176052 57176203 -38096448 - B1_Mur2 SINE Alu 0 149 1 4 1021 344 300 146 7 chr17 57176474 57176625 -38096026 + ID_B1 SINE B4 52 223 -1 4 1021 420 20 0 0 chr17 57176671 57176720 -38095931 + (TATG)n Simple_repeat Simple_repeat 1 49 0 4 1021 307 316 26 0 chr17 57177063 57177180 -38095471 + GA-rich Low_complexity Low_complexity 5 124 0 4 1021 518 158 0 0 chr17 57177237 57177319 -38095332 + B3 SINE B2 128 209 -7 4 1021 1024 114 0 26 chr17 57177345 57177498 -38095153 + B1_Mur4 SINE Alu 2 150 0 4 1021 438 323 6 18 chr17 57177529 57177699 -38094952 + GA-rich Low_complexity Low_complexity 3 170 0 4 1021 390 177 71 30 chr17 57178159 57178258 -38094393 - ZP3AR Satellite Satellite -58 154 52 4 1021 336 262 9 53 chr17 57178258 57178371 -38094280 - PB1D10 SINE Alu 0 117 10 4 1021 708 192 143 11 chr17 57178508 57178697 -38093954 + B3 SINE B2 3 216 0 4 1021 247 312 16 0 chr17 57178717 57178781 -38093870 + ID4_ SINE ID 5 69 -14 4 1021 1285 109 5 16 chr17 57178950 57179136 -38093515 - B2_Mm2 SINE B2 -10 185 2 4 1021 603 0 0 0 chr17 57179522 57179589 -38093062 + (TTTTG)n Simple_repeat Simple_repeat 5 71 0 4 1021 744 169 16 0 chr17 57179589 57179713 -38092938 - B1_Mur2 SINE Alu -14 135 10 4 1021 343 302 48 40 chr17 57179609 57179733 -38092918 - B4 SINE B4 -88 204 80 4 1021 327 266 121 7 chr17 57179730 57179870 -38092781 - B2_Mm2 SINE B2 -20 175 20 4 1021 208 209 0 21 chr17 57179890 57179983 -38092668 + (TG)n Simple_repeat Simple_repeat 2 92 0 4 1021 641 289 57 46 chr17 57180057 57180340 -38092311 - B4A SINE B4 -6 286 1 4 1021 616 228 12 35 chr17 57180347 57180508 -38092143 - ID_B1 SINE B4 -60 232 76 4 1021 1238 54 0 0 chr17 57180794 57180941 -38091710 - B1_Mus2 SINE Alu 0 147 1 4 1021 542 234 0 0 chr17 57181277 57181384 -38091267 - ID_B1 SINE B4 0 224 118 4 1021 308 306 55 24 chr17 57181394 57181558 -38091093 + L1MB3 LINE L1 6000 6168 -15 4 1021 1324 99 5 20 chr17 57181642 57181677 -38090974 - B2_Mm1t SINE B2 0 193 161 4 1021 495 0 0 0 chr17 57181677 57181732 -38090919 + (TTTA)n Simple_repeat Simple_repeat 3 57 0 4 1021 1324 99 5 20 chr17 57181732 57181892 -38090759 - B2_Mm1t SINE B2 -33 160 1 4 1021 535 214 43 0 chr17 57182004 57182121 -38090530 + B3A SINE B2 1 122 -76 4 1021 261 0 0 0 chr17 57182164 57182193 -38090458 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1021 371 250 0 30 chr17 57182206 57182305 -38090346 - RSINE1 SINE B4 -28 137 42 4 1021 503 263 70 6 chr17 57182301 57182473 -38090178 - B3A SINE B2 -15 183 1 4 1021 243 341 11 0 chr17 57182517 57182605 -38090046 + GA-rich Low_complexity Low_complexity 4 92 0 4 1021 223 162 0 56 chr17 57182617 57182689 -38089962 + GA-rich Low_complexity Low_complexity 4 71 0 4 1021 348 24 0 0 chr17 57182742 57182783 -38089868 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1021 278 180 0 16 chr17 57182783 57182845 -38089806 + GA-rich Low_complexity Low_complexity 4 64 0 4 1021 471 35 0 0 chr17 57182887 57182944 -38089707 + (CA)n Simple_repeat Simple_repeat 1 57 0 4 1021 308 233 99 11 chr17 57182985 57183076 -38089575 + RSINE1 SINE B4 19 117 -48 4 1021 202 277 6 18 chr17 57185374 57185543 -38087108 + (TG)n Simple_repeat Simple_repeat 2 168 0 4 1021 529 322 0 6 chr17 57185610 57185791 -38086860 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1021 343 136 51 0 chr17 57186002 57186061 -38086590 + PB1D9 SINE Alu 57 118 -2 4 1021 646 153 145 0 chr17 57186071 57186195 -38086456 + B1_Mur1 SINE Alu 2 143 -6 4 1021 441 0 0 0 chr17 57186205 57186254 -38086397 + (GGAA)n Simple_repeat Simple_repeat 3 51 0 4 1021 866 153 39 10 chr17 57186905 57187110 -38085541 - ZP3AR Satellite Satellite 0 212 2 4 1021 294 274 69 0 chr17 57187223 57187325 -38085326 - PB1D10 SINE Alu -8 109 1 4 1021 791 113 45 0 chr17 57187473 57187606 -38085045 - B1_Mus1 SINE Alu 0 148 10 4 1021 354 258 75 96 chr17 57187475 57187621 -38085030 - B4 SINE B4 -69 223 81 4 1021 1232 54 0 0 chr17 57187625 57187772 -38084879 - B1_Mus1 SINE Alu 0 148 2 4 1021 741 181 7 40 chr17 57187808 57187958 -38084693 + B1_Mur4 SINE Alu 5 149 -1 4 1021 21 36 0 0 chr17 57188017 57188045 -38084606 + AT_rich Low_complexity Low_complexity 1 28 0 4 1021 332 336 8 8 chr17 57188085 57188202 -38084449 + PB1 SINE Alu 9 125 -2 4 1021 451 301 67 22 chr17 57188234 57188414 -38084237 + B4A SINE B4 1 188 -104 4 1021 821 262 138 0 chr17 57188703 57188943 -38083708 - B4A SINE B4 -18 274 2 4 1021 621 231 15 7 chr17 57188959 57189094 -38083557 - B1F2 SINE Alu 0 149 14 4 1021 387 340 0 33 chr17 57189094 57189111 -38083540 - ID_B1 SINE B4 0 224 78 4 1021 688 220 13 39 chr17 57189120 57189276 -38083375 - B3 SINE B2 0 216 65 4 1021 698 274 13 0 chr17 57189310 57189463 -38083188 + RSINE1 SINE B4 3 157 -8 4 1021 973 247 33 48 chr17 57189493 57189765 -38082886 + B4 SINE B4 2 269 -23 4 1021 293 176 43 21 chr17 57189800 57189893 -38082758 + GA-rich Low_complexity Low_complexity 5 99 0 4 1021 445 291 8 8 chr17 57189915 57190033 -38082618 + PB1D7 SINE Alu 2 119 -1 4 1021 934 236 20 0 chr17 57190052 57190255 -38082396 + ID_B1 SINE B4 18 224 0 4 1021 1137 70 14 0 chr17 57190258 57190400 -38082251 + B1_Mus2 SINE Alu 1 144 -3 4 1021 239 0 0 31 chr17 57190400 57190432 -38082219 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1021 993 155 107 15 chr17 57190442 57190639 -38082012 + B3 SINE B2 1 215 -1 4 1021 351 240 58 39 chr17 57190866 57190970 -38081681 - PB1D10 SINE Alu -2 115 10 4 1021 287 254 16 0 chr17 57190990 57191053 -38081598 - B1F SINE Alu -85 64 1 4 1021 1312 55 0 27 chr17 57191068 57191256 -38081395 - B2_Mm2 SINE B2 0 195 13 4 1021 387 254 130 55 chr17 57191254 57191400 -38081251 - B3A SINE B2 -33 165 9 4 1021 1287 40 0 0 chr17 57191425 57191573 -38081078 - B1_Mus1 SINE Alu 0 148 1 4 1021 735 106 114 0 chr17 57191659 57191782 -38080869 - B1_Mm SINE Alu -1 146 10 4 1021 289 310 70 0 chr17 57191799 57191899 -38080752 - B1F1 SINE Alu -35 114 8 5 1021 440 300 18 18 chr17 57192382 57192581 -38080070 + ID_B1 SINE B4 10 208 -84 5 1021 659 256 84 27 chr17 57193964 57194189 -38078462 + RMER15 LTR ERVL 323 560 -15 5 1021 323 301 12 11 chr17 57194901 57195003 -38077648 - PB1D7 SINE Alu -24 125 29 5 1021 340 250 13 0 chr17 57195024 57195100 -38077551 - PB1D7 SINE Alu -11 109 33 5 1021 25 31 0 0 chr17 57195115 57195147 -38077504 + AT_rich Low_complexity Low_complexity 1 32 0 5 1021 366 23 0 0 chr17 57195149 57195192 -38077459 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1021 524 236 47 31 chr17 57195207 57195334 -38077317 - B3A SINE B2 -69 129 1 5 1021 446 234 28 0 chr17 57195334 57195441 -38077210 - PB1D7 SINE Alu -5 115 6 5 1021 631 253 12 12 chr17 57195451 57195615 -38077036 - RSINE1 SINE B4 0 165 2 5 1021 488 240 0 0 chr17 57195642 57195742 -38076909 - PB1D7 SINE Alu 0 120 21 5 1021 657 230 51 65 chr17 57196160 57196374 -38076277 - B4A SINE B4 0 292 82 5 1021 1195 56 0 0 chr17 57196378 57196521 -38076130 - B1_Mus2 SINE Alu 0 147 5 5 1021 1392 66 44 0 chr17 57196548 57196731 -38075920 - B2_Mm1t SINE B2 -2 191 1 5 1021 390 297 46 103 chr17 57196810 57196829 -38075822 - B4 SINE B4 -55 237 185 5 1021 844 114 0 15 chr17 57196829 57196962 -38075689 - B1_Mus2 SINE Alu -9 138 8 5 1021 390 297 46 103 chr17 57196962 57197005 -38075646 - B4 SINE B4 -55 184 54 5 1021 334 323 92 8 chr17 57197111 57197242 -38075409 - B4A SINE B4 -147 145 4 5 1021 320 186 44 44 chr17 57197917 57198007 -38074644 - ID_B1 SINE B4 -8 216 127 5 1021 219 36 0 0 chr17 57198081 57198109 -38074542 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 1021 188 86 0 28 chr17 57198689 57198725 -38073926 + (AGGGGG)n Simple_repeat Simple_repeat 1 35 0 5 1021 192 290 32 16 chr17 57200208 57200271 -38072380 - MIRc SINE MIR -85 183 120 5 1021 252 0 0 0 chr17 57200359 57200387 -38072264 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 5 1021 363 218 103 0 chr17 57200387 57200474 -38072177 - B1_Mur2 SINE Alu -2 147 52 5 1021 371 297 45 0 chr17 57200581 57200692 -38071959 - PB1D9 SINE Alu -2 118 3 5 1021 234 0 0 0 chr17 57200997 57201023 -38071628 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1021 268 211 0 0 chr17 57201233 57201290 -38071361 - ZP3AR Satellite Satellite -114 98 42 5 1021 361 260 88 20 chr17 57201295 57201397 -38071254 - PB1D10 SINE Alu -8 109 1 5 1021 192 200 0 0 chr17 57202370 57202420 -38070231 + T-rich Low_complexity Low_complexity 1 50 0 5 1021 365 247 27 103 chr17 57203143 57203215 -38069436 + MT2B2 LTR ERVL 95 152 -432 5 1021 936 63 0 0 chr17 57203215 57203341 -38069310 + B1_Mus1 SINE Alu 2 127 -21 5 1021 357 280 27 45 chr17 57203369 57203398 -38069253 - L1MCa LINE L1 -4513 1995 1969 5 1021 864 50 175 8 chr17 57203398 57203518 -38069133 + B1_Mus1 SINE Alu 3 142 -6 5 1021 357 280 27 45 chr17 57203518 57203600 -38069051 - L1MCa LINE L1 -4540 1968 1886 5 1021 681 272 72 0 chr17 57203604 57203784 -38068867 - ID_B1 SINE B4 -19 205 13 5 1021 578 178 122 15 chr17 57203857 57203988 -38068663 + B1_Mur1 SINE Alu 2 146 -3 5 1021 503 218 18 9 chr17 57204004 57204115 -38068536 + PB1D7 SINE Alu 5 116 -4 5 1021 255 214 18 0 chr17 57204116 57204172 -38068479 + ID_B1 SINE B4 84 140 -84 5 1021 356 256 23 32 chr17 57206774 57206910 -38065741 + ID_B1 SINE B4 1 177 -47 5 1021 334 245 149 0 chr17 57207605 57207699 -38064952 - RSINE1 SINE B4 -23 142 35 5 1021 1146 57 14 0 chr17 57207703 57207844 -38064807 - B1_Mus1 SINE Alu -5 143 1 5 1021 338 319 40 69 chr17 57207848 57207889 -38064762 + B3A SINE B2 27 74 -124 5 1021 2141 132 130 49 chr17 57207889 57208320 -38064331 + RMER4A LTR ERVK 1 466 0 5 1021 338 319 40 69 chr17 57208320 57208453 -38064198 + B3A SINE B2 75 195 -3 5 1021 1237 34 7 0 chr17 57208491 57208637 -38064014 + B1_Mus1 SINE Alu 2 148 0 5 1021 307 278 93 0 chr17 57208644 57208752 -38063899 + L1M4b LINE L1 2220 2337 -4997 5 1021 239 233 50 0 chr17 57208859 57208919 -38063732 + B4 SINE B4 130 192 -100 5 1021 284 205 23 114 chr17 57208927 57209015 -38063636 + RSINE1 SINE B4 23 102 -63 5 1021 708 97 111 16 chr17 57209016 57209142 -38063509 - B1_Mus1 SINE Alu 0 148 11 5 1021 271 288 0 0 chr17 57209137 57209196 -38063455 + RSINE1 SINE B4 95 153 -12 5 1021 353 196 20 89 chr17 57209262 57209363 -38063288 + PB1D9 SINE Alu 27 120 0 5 1021 206 333 14 27 chr17 57210512 57210586 -38062065 - L2b LINE L2 -1 3374 3302 5 1021 306 180 16 0 chr17 57210664 57210725 -38061926 + ID_B1 SINE B4 163 224 0 5 1021 323 289 36 0 chr17 57210740 57210823 -38061828 + HAL1-2a_MD LINE L1 2406 2491 -533 5 1021 526 91 0 0 chr17 57210823 57210900 -38061751 - B1_Mus2 SINE Alu 0 147 71 5 1021 207 0 0 0 chr17 57211377 57211400 -38061251 + (C)n Simple_repeat Simple_repeat 1 23 0 5 1021 318 261 21 11 chr17 57211587 57211680 -38060971 - PB1D9 SINE Alu 0 120 27 5 1021 864 114 0 0 chr17 57212084 57212216 -38060435 + B1_Mus2 SINE Alu 7 138 -9 5 1021 377 210 160 0 chr17 57212277 57212377 -38060274 + B3A SINE B2 7 122 -76 5 1021 319 304 87 13 chr17 57212485 57212635 -38060016 - RSINE1 SINE B4 -2 163 3 5 1021 834 56 0 0 chr17 57212662 57212770 -38059881 + (TCTA)n Simple_repeat Simple_repeat 3 110 0 5 1021 689 214 53 72 chr17 57212791 57212998 -38059653 - ID_B1 SINE B4 -18 206 4 5 1021 462 284 149 79 chr17 57214091 57214220 -38058431 - Lx8 LINE L1 -17 7456 7318 5 1021 813 139 7 42 chr17 57214220 57214363 -38058288 + B1_Mur1 SINE Alu 1 138 -11 5 1021 462 282 228 60 chr17 57214363 57214671 -38057980 - Lx8 LINE L1 -156 7317 6959 5 1021 228 312 16 0 chr17 57215115 57215179 -38057472 + Tigger13a DNA MER2_type 533 597 -174 5 1021 365 245 28 19 chr17 57215381 57215489 -38057162 + B4 SINE B4 115 223 -69 5 1021 197 33 33 0 chr17 57215493 57215523 -38057128 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1021 886 271 28 9 chr17 57215543 57215755 -38056896 + B3 SINE B2 1 216 0 5 1021 269 276 0 116 chr17 57215807 57215893 -38056758 + B4 SINE B4 217 292 0 5 1021 634 192 88 0 chr17 57216611 57216736 -38055915 + B1_Mur1 SINE Alu 8 143 -6 5 1021 687 155 0 0 chr17 57216787 57216961 -38055690 + GA-rich Low_complexity Low_complexity 2 175 0 5 1021 261 57 0 0 chr17 57216975 57217010 -38055641 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 5 1021 338 289 140 7 chr17 57218442 57218493 -38054158 + B3A SINE B2 1 51 -147 5 1021 2339 85 3 86 chr17 57218493 57218852 -38053799 + ORR1A4 LTR MaLR 1 329 0 5 1021 338 288 97 48 chr17 57218852 57218986 -38053665 + B3A SINE B2 52 194 -1 5 1021 743 168 0 37 chr17 57219035 57219171 -38053480 + B1_Mur2 SINE Alu 19 149 0 5 1021 566 332 21 0 chr17 57221294 57221484 -38051167 + ID_B1 SINE B4 16 209 -15 5 1021 258 105 0 0 chr17 57221589 57221627 -38051024 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 5 1021 262 218 231 0 chr17 57221643 57221721 -38050930 + B1_Mm SINE Alu 1 96 -51 5 1021 450 0 0 0 chr17 57221728 57221778 -38050873 + (CCAA)n Simple_repeat Simple_repeat 2 51 0 5 1021 717 265 54 16 chr17 57221784 57221968 -38050683 - B3A SINE B2 -6 192 2 5 1021 239 264 120 19 chr17 57221996 57222104 -38050547 - PB1D9 SINE Alu -1 119 1 5 1021 481 288 56 6 chr17 57222112 57222273 -38050378 - ID_B1 SINE B4 -2 222 54 5 1021 333 274 87 29 chr17 57222351 57222558 -38050093 - L1MA4 LINE L1 0 6300 6082 5 1021 328 295 144 6 chr17 57222701 57222875 -38049776 - B3A SINE B2 0 198 1 5 1021 310 297 61 47 chr17 57223166 57223378 -38049273 + L2a LINE L2 2925 3139 -287 5 1021 198 0 0 0 chr17 57223378 57223400 -38049251 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 1021 830 276 57 95 chr17 57223403 57223699 -38048952 - B4A SINE B4 0 292 8 5 1021 183 284 221 0 chr17 57223907 57224002 -38048649 - MIR3 SINE MIR -91 117 2 5 1021 272 307 0 0 chr17 57225032 57225107 -38047544 + ID4_ SINE ID 7 81 -2 5 1021 371 331 90 11 chr17 57225048 57225225 -38047426 + ID_B1 SINE B4 24 214 -10 5 1021 214 268 0 40 chr17 57225764 57225838 -38046813 + G-rich Low_complexity Low_complexity 2 72 0 5 1021 180 0 0 0 chr17 57225876 57225896 -38046755 + (TTTTTG)n Simple_repeat Simple_repeat 5 24 0 5 1021 372 77 0 0 chr17 57226072 57226124 -38046527 + (TATG)n Simple_repeat Simple_repeat 4 55 0 5 1021 645 239 0 14 chr17 57226131 57226271 -38046380 - ID_B1 SINE B4 -3 221 84 5 1021 476 250 83 0 chr17 57226308 57226428 -38046223 - ID_B1 SINE B4 -2 222 93 5 1021 516 231 49 16 chr17 57227713 57227836 -38044815 - B1F1 SINE Alu -1 148 22 5 1021 253 191 13 117 chr17 57227770 57227847 -38044804 - MT2B2 LTR ERVL -340 244 176 5 1021 640 246 131 6 chr17 57228137 57228313 -38044338 - ID_B1 SINE B4 -25 199 2 5 1021 335 192 13 0 chr17 57228387 57228465 -38044186 + CT-rich Low_complexity Low_complexity 2 80 0 5 1021 939 177 113 10 chr17 57228546 57228740 -38043911 - B3 SINE B2 0 216 3 5 1021 460 311 198 14 chr17 57228877 57229245 -38043406 - Lx8 LINE L1 -164 7309 6874 5 1021 936 87 0 0 chr17 57229316 57229442 -38043209 - B1_Mus1 SINE Alu -21 127 2 5 1021 378 238 89 37 chr17 57229453 57229588 -38043063 - Lx8 LINE L1 -637 6836 6695 5 1021 580 195 39 0 chr17 57229611 57229739 -38042912 + ZP3AR Satellite Satellite 9 141 -71 5 1021 212 328 41 104 chr17 57229802 57230023 -38042628 - MIRb SINE MIR -37 231 25 5 1021 276 130 0 0 chr17 57230514 57230560 -38042091 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1021 22 0 0 0 chr17 57230772 57230794 -38041857 + AT_rich Low_complexity Low_complexity 1 22 0 5 1021 2069 231 31 14 chr17 57230794 57231238 -38041413 - Lx5 LINE L1 0 7050 6599 6 1021 1027 226 44 175 chr17 57231376 57231805 -38040846 - MTE2a LTR MaLR 0 379 7 6 1021 588 226 43 21 chr17 57232305 57232363 -38040288 + ID SINE ID 25 85 -139 6 1021 432 221 114 9 chr17 57232363 57232468 -38040183 + PB1D10 SINE Alu 1 116 -1 6 1021 687 207 15 15 chr17 57232472 57232609 -38040042 + B1_Mur1 SINE Alu 2 138 -11 6 1021 201 147 0 0 chr17 57232882 57232916 -38039735 + (TTCC)n Simple_repeat Simple_repeat 1 34 0 6 1021 548 309 36 0 chr17 57232931 57233070 -38039581 - ID_B1 SINE B4 -80 144 1 6 1021 393 235 48 10 chr17 57233221 57233324 -38039327 - MTEb LTR MaLR 0 379 273 6 1021 854 127 142 18 chr17 57233324 57233493 -38039158 - B2_Mm2 SINE B2 -1 194 5 6 1021 544 228 203 0 chr17 57233615 57233738 -38038913 + B1_Mur2 SINE Alu 1 148 -1 6 1021 838 257 34 0 chr17 57233739 57233945 -38038706 + B3 SINE B2 1 213 -3 6 1021 1039 75 8 0 chr17 57233947 57234080 -38038571 + B1_Mus1 SINE Alu 2 135 -13 6 1021 714 124 0 0 chr17 57234129 57234234 -38038417 - MTC LTR MaLR -301 120 16 6 1021 905 228 26 78 chr17 57234216 57234418 -38038233 + MTD LTR MaLR 15 210 -211 6 1021 1395 78 5 15 chr17 57234418 57234614 -38038037 + B2_Mm2 SINE B2 2 195 0 6 1021 905 232 64 69 chr17 57234614 57234758 -38037893 + MTD LTR MaLR 197 362 -38 6 1021 743 235 57 36 chr17 57235035 57235229 -38037422 + B3A SINE B2 1 198 0 6 1021 180 77 0 0 chr17 57235513 57235539 -38037112 + (G)n Simple_repeat Simple_repeat 1 26 0 6 1021 696 225 26 5 chr17 57236306 57236476 -38036175 - B3 SINE B2 -6 192 11 6 1021 490 290 36 14 chr17 57236499 57236639 -38036012 - B4 SINE B4 -69 223 81 6 1021 1206 41 0 20 chr17 57236645 57236795 -38035856 - B1_Mm SINE Alu 0 147 1 6 1021 282 258 48 0 chr17 57236829 57236891 -38035760 - B4A SINE B4 -215 77 13 6 1021 633 214 56 76 chr17 57236925 57237122 -38035529 - B3A SINE B2 0 198 6 6 1021 526 234 70 8 chr17 57237163 57237292 -38035359 - B1F SINE Alu -12 137 1 6 1021 597 28 0 0 chr17 57237313 57237384 -38035267 + (TC)n Simple_repeat Simple_repeat 2 72 0 6 1021 278 194 0 15 chr17 57237747 57237815 -38034836 + GA-rich Low_complexity Low_complexity 3 69 0 6 1021 271 248 61 52 chr17 57238068 57238083 -38034568 - B1_Mm SINE Alu -1 146 31 6 1021 465 208 0 40 chr17 57238083 57238183 -38034468 - ID_B1 SINE B4 -17 207 112 6 1021 1030 32 0 0 chr17 57238401 57238524 -38034127 - B1_Mm SINE Alu 0 147 25 6 1021 1432 44 37 42 chr17 57238527 57238716 -38033935 - B2_Mm2 SINE B2 -5 190 3 6 1021 344 292 168 0 chr17 57238716 57238829 -38033822 - MIR SINE MIR -96 166 35 6 1021 388 276 8 65 chr17 57238985 57239109 -38033542 + PB1 SINE Alu 11 127 0 6 1021 617 179 77 72 chr17 57239150 57239369 -38033282 + ZP3AR Satellite Satellite 1 220 -25 6 1021 445 272 23 39 chr17 57239842 57239997 -38032654 + ID_B1 SINE B4 93 243 -49 6 1021 354 246 231 60 chr17 57240065 57240165 -38032486 + B3 SINE B2 49 174 -42 6 1021 351 98 0 0 chr17 57240165 57240226 -38032425 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 1021 909 211 89 5 chr17 57240229 57240420 -38032231 + B3 SINE B2 2 208 -8 6 1021 354 246 231 60 chr17 57240420 57240449 -38032202 + B3 SINE B2 175 205 -11 6 1021 1457 89 16 0 chr17 57240507 57240697 -38031954 + B2_Mm2 SINE B2 3 195 0 6 1021 840 178 4 0 chr17 57241081 57241310 -38031341 + (TCCA)n Simple_repeat Simple_repeat 1 230 0 6 1021 582 203 0 0 chr17 57241355 57241483 -38031168 + (TCCA)n Simple_repeat Simple_repeat 2 129 0 6 1021 953 68 0 15 chr17 57241987 57242122 -38030529 + (CTA)n Simple_repeat Simple_repeat 3 135 0 6 1021 748 254 48 0 chr17 57242199 57242364 -38030287 + ID_B1 SINE B4 49 221 -3 6 1021 315 113 0 0 chr17 57242389 57242442 -38030209 + (TCTG)n Simple_repeat Simple_repeat 2 54 0 6 1021 455 242 11 0 chr17 57242442 57242533 -38030118 - B1_Mur1 SINE Alu -24 125 34 6 1021 180 0 0 0 chr17 57242554 57242574 -38030077 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 6 1021 390 252 39 10 chr17 57242574 57242678 -38029973 - PB1D10 SINE Alu -10 107 1 6 1021 481 332 55 41 chr17 57243420 57243640 -38029011 + ID_B1 SINE B4 1 223 -1 6 1021 228 302 152 53 chr17 57243699 57243726 -38028925 - B2_Mm1a SINE B2 -1 192 5 6 1021 509 288 14 83 chr17 57243726 57243870 -38028781 - RSINE1 SINE B4 -26 139 6 6 1021 322 38 0 37 chr17 57244253 57244307 -38028344 + (CAAAA)n Simple_repeat Simple_repeat 5 56 0 6 1021 423 0 0 0 chr17 57244577 57244624 -38028027 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1021 182 191 0 21 chr17 57244662 57244710 -38027941 + G-rich Low_complexity Low_complexity 4 50 0 6 1021 267 103 0 0 chr17 57245372 57245411 -38027240 + (CCCCG)n Simple_repeat Simple_repeat 1 39 0 6 1021 308 250 131 0 chr17 57245938 57246022 -38026629 - ID_B1 SINE B4 -21 203 109 6 1021 210 264 152 11 chr17 57245940 57246032 -38026619 - B1_Mus1 SINE Alu -26 122 18 6 1021 215 254 12 43 chr17 57246119 57246225 -38026426 + CT-rich Low_complexity Low_complexity 1 102 0 6 1021 35 54 0 0 chr17 57247116 57247172 -38025479 + AT_rich Low_complexity Low_complexity 1 56 0 6 1021 402 85 0 0 chr17 57247253 57247312 -38025339 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1021 636 250 15 0 chr17 57247315 57247451 -38025200 - B4A SINE B4 -16 276 139 6 1021 465 223 89 0 chr17 57247512 57247624 -38025027 - B1F SINE Alu -6 143 22 6 1021 385 276 149 29 chr17 57247624 57247687 -38024964 - ID_B1 SINE B4 -6 218 23 6 1021 235 163 130 65 chr17 57247920 57248012 -38024639 + PB1 SINE Alu 27 124 -3 6 1021 1688 182 50 32 chr17 57248815 57249218 -38023433 + RMER17C LTR ERVK 1 410 0 6 1021 1255 204 18 0 chr17 57249227 57249453 -38023198 - Lx6 LINE L1 0 7460 7231 6 1021 376 297 95 45 chr17 57249454 57249646 -38023005 + MIRb SINE MIR 48 253 -9 6 1021 393 39 0 0 chr17 57249654 57249705 -38022946 + (GA)n Simple_repeat Simple_repeat 2 52 0 6 1021 2007 153 45 11 chr17 57249814 57250191 -38022460 + RMER10B LTR ERVL 3 392 -6 6 1021 519 274 22 92 chr17 57250222 57250317 -38022334 + B4A SINE B4 2 83 -209 6 1021 585 195 8 34 chr17 57250317 57250434 -38022217 + B1_Mus2 SINE Alu 1 114 -33 6 1021 653 36 12 0 chr17 57250447 57250531 -38022120 + (TTCC)n Simple_repeat Simple_repeat 1 85 0 6 1021 426 20 0 0 chr17 57250563 57250614 -38022037 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1021 576 276 78 56 chr17 57250649 57250829 -38021822 + B3A SINE B2 5 188 -10 6 1021 492 189 307 12 chr17 57251130 57251296 -38021355 - B3 SINE B2 0 216 2 6 1021 602 241 113 0 chr17 57251442 57251575 -38021076 - B1_Mur2 SINE Alu -1 148 1 6 1021 363 261 112 77 chr17 57251575 57251614 -38021037 - B4 SINE B4 -201 91 47 6 1021 257 299 0 196 chr17 57251654 57251787 -38020864 + B4A SINE B4 183 289 -3 6 1021 960 102 0 0 chr17 57251996 57252143 -38020508 + (TCTA)n Simple_repeat Simple_repeat 4 150 0 6 1021 751 191 15 0 chr17 57252143 57252274 -38020377 - B1_Mus1 SINE Alu -10 138 6 6 1021 427 315 0 14 chr17 57252274 57252291 -38020360 - ID_B1 SINE B4 -10 214 69 6 1021 232 205 346 0 chr17 57252280 57252358 -38020293 + PB1D10 SINE Alu 7 111 -6 6 1021 184 264 54 69 chr17 57252432 57252562 -38020089 - L2 LINE L2 -1292 2127 2000 6 1021 348 259 121 0 chr17 57252715 57252831 -38019820 - ZP3AR Satellite Satellite -80 132 3 6 1021 321 284 8 8 chr17 57252855 57252972 -38019679 - PB1D10 SINE Alu 0 117 1 6 1021 745 161 34 20 chr17 57253189 57253322 -38019329 + B1_Mur1 SINE Alu 1 136 -13 6 1021 252 0 0 0 chr17 57253322 57253350 -38019301 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 6 1021 745 161 34 20 chr17 57253350 57253362 -38019289 + B1_Mur1 SINE Alu 137 147 -2 6 1021 420 20 0 0 chr17 57253458 57253507 -38019144 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 1021 224 290 32 0 chr17 57253537 57253599 -38019052 - ID4 SINE ID -16 67 4 6 1021 448 267 0 9 chr17 57253645 57253751 -38018900 - ID_B1 SINE B4 -2 222 118 6 1021 5337 77 1 3 chr17 57255192 57255948 -38016703 + MusHAL1 LINE L1 1318 2072 -640 6 1021 2319 49 0 3 chr17 57255949 57256234 -38016417 + MTA_Mm LTR MaLR 1 284 -112 6 1021 189 197 0 0 chr17 57256253 57256314 -38016337 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 1021 426 276 16 0 chr17 57256346 57256458 -38016193 - PB1D10 SINE Alu -16 133 8 6 1021 519 242 17 0 chr17 57256593 57256713 -38015938 - B1_Mur3 SINE Alu -20 129 8 6 1021 1294 132 102 0 chr17 57256893 57257098 -38015553 + URR1A DNA MER1_type 1 226 0 6 1021 343 249 117 0 chr17 57257204 57257304 -38015347 + PB1D10 SINE Alu 1 109 -8 6 1021 2920 122 2 2 chr17 57257376 57257795 -38014856 - MTC LTR MaLR -2 419 1 6 1021 228 298 67 0 chr17 57257820 57257924 -38014727 - L1MB5 LINE L1 -189 5985 5875 6 1021 765 200 75 48 chr17 57257954 57258408 -38014243 + ZP3AR Satellite Satellite 1 466 0 6 1021 360 0 0 0 chr17 57258666 57258706 -38013945 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1021 2446 160 111 10 chr17 57258725 57259204 -38013447 - RLTR11A2 LTR ERVK 0 527 1 6 1021 1427 79 11 0 chr17 57259558 57259747 -38012904 - B2_Mm1t SINE B2 -2 191 1 6 1021 1236 29 0 0 chr17 57259776 57259914 -38012737 + B1_Mus2 SINE Alu 1 138 -9 6 1021 188 35 35 0 chr17 57259914 57259943 -38012708 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 6 1021 201 143 0 45 chr17 57260023 57260067 -38012584 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 6 1021 1232 54 0 0 chr17 57260068 57260215 -38012436 + B1_Mus2 SINE Alu 1 147 0 7 1021 486 169 0 0 chr17 57260215 57260304 -38012347 + GA-rich Low_complexity Low_complexity 2 90 0 7 1021 1115 198 97 20 chr17 57260311 57260652 -38011999 + L1_Rod LINE L1 5205 5571 -276 7 1021 743 235 12 12 chr17 57260648 57260816 -38011835 - Lx8 LINE L1 -778 6695 6528 7 1021 794 206 36 18 chr17 57260824 57260992 -38011659 - Lx8 LINE L1 -1056 6417 6247 7 1021 213 175 24 24 chr17 57261095 57261136 -38011515 - B4 SINE B4 -157 135 95 7 1021 441 200 67 0 chr17 57261725 57261815 -38010836 - PB1D9 SINE Alu -2 118 23 7 1021 292 257 97 35 chr17 57261890 57262003 -38010648 + PB1D7 SINE Alu 1 120 0 7 1021 476 59 15 0 chr17 57262036 57262104 -38010547 + (CCAA)n Simple_repeat Simple_repeat 1 69 0 7 1021 696 114 25 12 chr17 57262142 57262302 -38010349 + (CCAA)n Simple_repeat Simple_repeat 2 163 0 7 1021 519 135 44 11 chr17 57262303 57262393 -38010258 + B1_Mur2 SINE Alu 41 133 -16 7 1021 303 28 0 0 chr17 57262619 57262655 -38009996 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 7 1021 590 268 33 0 chr17 57263004 57263157 -38009494 - B3A SINE B2 -1 197 40 7 1021 1276 178 25 60 chr17 57263166 57263482 -38009169 - RMER1C Other Other 0 1342 1038 7 1021 546 16 0 0 chr17 57263495 57263558 -38009093 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 7 1021 1059 84 103 6 chr17 57263562 57263718 -38008933 - B2_Mm2 SINE B2 -24 171 1 7 1021 1141 204 31 68 chr17 57263719 57264013 -38008638 - RMER1C Other Other -289 1053 771 7 1021 441 0 0 0 chr17 57264035 57264084 -38008567 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1021 240 229 21 0 chr17 57264809 57264857 -38007794 + B3A SINE B2 3 51 -147 7 1021 542 226 10 0 chr17 57265952 57266054 -38006597 + B3A SINE B2 1 103 -95 7 1021 261 288 0 0 chr17 57266098 57266157 -38006494 - tRNA-Ala-GCY_ tRNA tRNA -12 63 5 7 1021 258 304 0 14 chr17 57266157 57266168 -38006483 - ID4_ SINE ID -14 69 1 7 1021 760 239 38 19 chr17 57266177 57266386 -38006265 - ID_B1 SINE B4 -7 217 5 7 1021 468 260 8 23 chr17 57266472 57266602 -38006049 - ID_B1 SINE B4 -3 221 94 7 1021 318 247 11 22 chr17 57266524 57266615 -38006036 - PB1D10 SINE Alu -27 90 1 7 1021 369 0 0 0 chr17 57266636 57266677 -38005974 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 7 1021 189 74 0 0 chr17 57266884 57266911 -38005740 + (CCCCCT)n Simple_repeat Simple_repeat 6 32 0 7 1021 511 264 41 0 chr17 57267037 57267158 -38005493 + RSINE1 SINE B4 1 126 -39 7 1021 225 335 35 106 chr17 57267094 57267264 -38005387 - B3 SINE B2 -58 158 1 7 1021 281 151 141 0 chr17 57267316 57267621 -38005030 + (CAGAA)n Simple_repeat Simple_repeat 1 348 0 7 1021 253 163 36 73 chr17 57267507 57267672 -38004979 + (CACAA)n Simple_repeat Simple_repeat 4 162 0 7 1021 1021 250 88 20 chr17 57267776 57268082 -38004569 + RMER1B Other Other 35 361 -705 7 1021 296 48 24 0 chr17 57268094 57268136 -38004515 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 1021 3098 240 124 13 chr17 57268141 57268633 -38004018 + RMER1A Other Other 50 521 -545 7 1021 3192 37 34 0 chr17 57268633 57269014 -38003637 + MTA_Mm LTR MaLR 1 394 -2 7 1021 3098 237 147 12 chr17 57269014 57269567 -38003084 + RMER1A Other Other 361 1029 -1 7 1021 333 246 0 0 chr17 57269680 57269741 -38002910 - RLTR18B LTR ERVK -5 507 447 7 1021 1190 68 0 14 chr17 57269746 57269894 -38002757 + B1_Mus1 SINE Alu 3 148 0 7 1021 252 86 0 0 chr17 57269894 57269929 -38002722 + (A)n Simple_repeat Simple_repeat 1 35 0 7 1021 1352 221 128 66 chr17 57269929 57270366 -38002285 - RLTR18B LTR ERVK -48 464 1 7 1021 279 348 21 42 chr17 57270495 57270639 -38002012 - RMER15 LTR ERVL -13 562 422 7 1021 367 230 71 103 chr17 57270724 57270879 -38001772 - RMER15 LTR ERVL -425 150 1 7 1021 360 111 0 0 chr17 57270992 57271046 -38001605 + (TG)n Simple_repeat Simple_repeat 2 55 0 7 1021 388 293 229 59 chr17 57271054 57271290 -38001361 - B4A SINE B4 -16 276 1 7 1021 323 231 105 13 chr17 57271407 57271526 -38001125 + MLT1F1 LTR MaLR 11 142 -413 7 1021 237 256 0 0 chr17 57271539 57271621 -38001030 + (CA)n Simple_repeat Simple_repeat 1 82 0 7 1021 230 238 48 36 chr17 57271621 57271704 -38000947 + (CATG)n Simple_repeat Simple_repeat 3 86 0 7 1021 189 254 0 0 chr17 57271710 57271765 -38000886 + (CATA)n Simple_repeat Simple_repeat 4 58 0 7 1021 302 200 18 0 chr17 57271769 57271824 -38000827 + HAL1-3A_ME LINE L1 1976 2031 -827 7 1021 216 310 0 14 chr17 57271905 57271977 -38000674 + CT-rich Low_complexity Low_complexity 6 76 0 7 1021 474 233 17 17 chr17 57271978 57272040 -38000611 + polypyrimidine Low_complexity Low_complexity 120 180 0 7 1021 1248 41 0 0 chr17 57272040 57272187 -38000464 - B1_Mus2 SINE Alu 0 147 1 7 1021 474 233 17 17 chr17 57272187 57272303 -38000348 + CT-rich Low_complexity Low_complexity 2 119 0 7 1021 236 145 47 31 chr17 57272479 57272543 -38000108 + CT-rich Low_complexity Low_complexity 3 67 0 7 1021 6161 70 5 1 chr17 57272571 57273391 -37999260 + RLTR22_Mus LTR ERVK 1 823 -985 7 1021 473 301 39 70 chr17 57273646 57273875 -37998776 + RMER12 LTR ERVK 1101 1322 0 7 1021 554 255 78 37 chr17 57273875 57274064 -37998587 - B4A SINE B4 -42 250 54 7 1021 368 140 0 0 chr17 57274175 57274232 -37998419 - PB1D9 SINE Alu -63 57 1 7 1021 692 227 252 10 chr17 57274275 57274558 -37998093 - ORR1D2 LTR MaLR -11 363 3 7 1021 1047 209 0 0 chr17 57275118 57275305 -37997346 - B3 SINE B2 -3 213 27 7 1021 21 36 0 0 chr17 57275557 57275585 -37997066 + AT_rich Low_complexity Low_complexity 1 28 0 7 1021 292 213 31 62 chr17 57275590 57275655 -37996996 - RSINE1 SINE B4 0 165 103 7 1021 584 243 56 41 chr17 57275747 57276005 -37996646 + ORR1D2 LTR MaLR 1 270 -89 7 1021 856 148 15 0 chr17 57275973 57276108 -37996543 + ID_B1 SINE B4 82 218 -6 7 1021 733 204 44 0 chr17 57276292 57276429 -37996222 + ID_B1 SINE B4 82 224 0 7 1021 49 36 0 24 chr17 57276503 57276562 -37996089 + AT_rich Low_complexity Low_complexity 1 59 0 7 1021 819 141 111 0 chr17 57276562 57276697 -37995954 - B1_Mur4 SINE Alu 0 150 1 7 1021 49 36 0 24 chr17 57276697 57276722 -37995929 + AT_rich Low_complexity Low_complexity 1 24 0 7 1021 1873 210 32 81 chr17 57276765 57277341 -37995310 + RLTR20B3 LTR ERVK 5 528 0 7 1021 428 242 52 82 chr17 57277487 57277622 -37995029 + RSINE1 SINE B4 4 134 -31 7 1021 537 272 121 0 chr17 57277768 57277941 -37994710 - B3A SINE B2 -4 194 1 7 1021 399 280 30 0 chr17 57277947 57278047 -37994604 + PB1D10 SINE Alu 1 103 -14 7 1021 723 178 245 0 chr17 57278064 57278227 -37994424 + B3 SINE B2 4 206 -10 7 127 956 204 176 102 chr17 57278245 57278679 -37993972 + RMER1B Other Other 241 664 -402 7 1022 859 155 144 9 chr17 57278798 57279084 -37993567 + MTD LTR MaLR 1 407 -12 7 1022 270 0 0 0 chr17 57279145 57279175 -37993476 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 1022 501 17 0 0 chr17 57279175 57279232 -37993419 + (GA)n Simple_repeat Simple_repeat 1 58 0 7 1022 513 276 26 13 chr17 57279234 57279388 -37993263 - MER54A LTR ERVL -695 206 51 7 1022 409 269 163 36 chr17 57279405 57279571 -37993080 - MER21B LTR ERV1 -74 789 603 7 1022 759 266 52 26 chr17 57279664 57279896 -37992755 - MTEa LTR MaLR -10 369 132 7 1022 333 284 0 0 chr17 57279940 57280109 -37992542 + GA-rich Low_complexity Low_complexity 1 169 0 7 1022 272 328 112 0 chr17 57280555 57280572 -37992079 + B1F SINE Alu 3 141 -8 7 1022 420 259 74 0 chr17 57280572 57280680 -37991971 + ID_B1 SINE B4 101 216 -8 7 1022 325 134 49 0 chr17 57280829 57280911 -37991740 + (TATG)n Simple_repeat Simple_repeat 2 87 0 7 1022 393 170 26 33 chr17 57280920 57281072 -37991579 + (TCTA)n Simple_repeat Simple_repeat 4 154 0 7 1022 278 242 60 45 chr17 57281263 57281397 -37991254 - L1_Mur3 LINE L1 -137 5743 5608 7 1022 608 229 60 13 chr17 57281638 57281814 -37990837 + B3 SINE B2 1 193 -2 7 1022 269 324 19 0 chr17 57282751 57282859 -37989792 + CT-rich Low_complexity Low_complexity 1 110 0 7 1022 524 267 8 17 chr17 57282867 57282985 -37989666 - PB1D10 SINE Alu 0 117 1 7 1022 253 231 19 0 chr17 57283073 57283125 -37989526 - B3 SINE B2 -134 82 30 7 1022 667 100 110 0 chr17 57283137 57283237 -37989414 - B1_Mus1 SINE Alu -15 133 23 7 1022 500 261 37 37 chr17 57283618 57283781 -37988870 + B4A SINE B4 53 215 -77 7 1022 441 338 66 78 chr17 57283915 57283936 -37988715 + MTE-int LTR MaLR 1028 1045 -325 7 1022 414 0 0 0 chr17 57283936 57283982 -37988669 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1022 541 338 66 78 chr17 57283982 57284191 -37988460 + MTE-int LTR MaLR 1046 1410 -170 7 1022 1045 190 23 23 chr17 57284191 57284407 -37988244 - B3 SINE B2 0 216 1 7 1022 541 341 48 64 chr17 57284407 57284536 -37988115 + MTE-int LTR MaLR 1411 1541 -39 7 1022 894 269 41 39 chr17 57284742 57285015 -37987636 - RMER10A LTR ERVL 0 398 150 7 1022 1020 99 0 0 chr17 57285015 57285166 -37987485 + (GAA)n Simple_repeat Simple_repeat 2 152 0 7 1022 894 208 25 67 chr17 57285166 57285358 -37987293 - RMER10A LTR ERVL -221 221 37 7 1022 307 302 47 0 chr17 57286274 57286360 -37986291 + MER54A LTR ERVL 697 786 -115 7 1022 809 266 49 99 chr17 57286377 57286576 -37986075 + MTEa LTR MaLR 1 185 -194 7 1022 1102 95 0 0 chr17 57286576 57286723 -37985928 - B1_Mus1 SINE Alu 0 148 2 7 1022 809 266 49 99 chr17 57286723 57286807 -37985844 + MTEa LTR MaLR 186 270 -109 7 1022 333 293 40 20 chr17 57287189 57287290 -37985361 - PB1D10 SINE Alu -10 107 5 7 1022 183 205 0 0 chr17 57287640 57287679 -37984972 + CT-rich Low_complexity Low_complexity 4 42 0 7 1022 632 258 170 0 chr17 57287682 57287864 -37984787 - ID_B1 SINE B4 -4 220 8 7 1022 514 278 113 49 chr17 57287860 57288045 -37984606 - ID_B1 SINE B4 -21 203 7 7 1022 305 198 12 0 chr17 57288053 57288139 -37984512 + CT-rich Low_complexity Low_complexity 2 88 0 7 1022 22 35 0 0 chr17 57288781 57288810 -37983841 + GC_rich Low_complexity Low_complexity 1 29 0 8 1022 189 0 0 0 chr17 57289297 57289318 -37983333 + (TTCA)n Simple_repeat Simple_repeat 2 22 0 8 1022 185 364 0 18 chr17 57289319 57289375 -37983276 - L2b LINE L2 -13 3362 3308 8 1022 243 262 78 67 chr17 57289474 57289564 -37983087 - B1F1 SINE Alu -46 103 13 8 1022 407 232 133 9 chr17 57289537 57289650 -37983001 - B1F SINE Alu -22 127 1 8 1022 446 324 83 5 chr17 57289755 57289972 -37982679 + Lx8 LINE L1 7061 7294 -179 8 1022 538 296 77 11 chr17 57290678 57290859 -37981792 + B3A SINE B2 1 193 -5 8 1022 1550 179 178 153 chr17 57290916 57291150 -37981501 + RMER19B LTR ERVK 1 218 -684 8 1022 3258 62 155 4 chr17 57291150 57291601 -37981050 - MURVY-LTR LTR ERV1 0 519 1 8 1022 1550 179 178 153 chr17 57291601 57291754 -37980897 + RMER19B LTR ERVK 219 418 -484 8 1022 1136 88 0 0 chr17 57291754 57291901 -37980750 + B1_Mus2 SINE Alu 1 147 0 8 1022 1747 156 90 60 chr17 57291901 57292317 -37980334 + RMER19B LTR ERVK 419 890 -12 8 1022 387 327 105 18 chr17 57292331 57292502 -37980149 + B4A SINE B4 24 209 -83 8 1022 555 226 194 6 chr17 57292611 57292817 -37979834 - MTD LTR MaLR -52 348 95 8 1022 261 0 0 0 chr17 57292921 57292950 -37979701 + (TTA)n Simple_repeat Simple_repeat 2 30 0 8 1022 314 261 150 34 chr17 57293028 57293175 -37979476 + ZP3AR Satellite Satellite 48 211 -1 8 1022 201 235 75 75 chr17 57293608 57293714 -37978937 + L2c LINE L2 3128 3233 -154 8 1022 741 160 60 60 chr17 57293835 57294001 -37978650 - MTD LTR MaLR -8 411 246 8 1022 23 33 0 0 chr17 57294507 57294537 -37978114 + AT_rich Low_complexity Low_complexity 1 30 0 8 1022 911 150 29 0 chr17 57294547 57294687 -37977964 + B1_Mus1 SINE Alu 3 146 -2 8 1022 511 259 119 0 chr17 57294698 57294883 -37977768 - B3 SINE B2 -9 207 1 8 1022 1662 160 186 3 chr17 57296503 57296842 -37975809 + MTB_Mm LTR MaLR 5 405 -2 8 1022 10354 139 70 56 chr17 57296941 57298876 -37973775 - ORR1B1-int LTR MaLR -2 1961 1 8 1022 2052 138 85 30 chr17 57298880 57299246 -37973405 - ORR1B1 LTR MaLR -8 386 1 8 1022 324 210 0 0 chr17 57299246 57299327 -37973324 + (ATGGTG)n Simple_repeat Simple_repeat 4 84 0 8 1022 537 140 30 10 chr17 57299539 57299640 -37973011 - MYSERV6-int LTR ERVK -271 8688 8586 8 1022 3226 56 8 0 chr17 57299703 57300096 -37972555 + MTA_Mm LTR MaLR 1 396 0 8 1022 285 172 18 21 chr17 57300126 57300190 -37972461 - B1_Mur4 SINE Alu -2 148 57 8 1022 1480 234 41 22 chr17 57300198 57300698 -37971953 - MYSERV6-int LTR ERVK -420 8539 8117 8 1022 767 178 11 17 chr17 57300780 57300957 -37971694 - RLTR42-int LTR ERVK -3417 2105 1930 8 1022 1210 64 0 0 chr17 57301031 57301172 -37971479 - B1_Mm SINE Alu -5 142 2 8 1022 377 174 70 140 chr17 57301604 57301718 -37970933 - RLTR42-int LTR ERVK -3728 1794 1689 8 1022 1438 60 27 0 chr17 57302012 57302196 -37970455 - B2_Mm2 SINE B2 -6 189 1 8 1022 225 0 0 0 chr17 57302737 57302762 -37969889 + (TG)n Simple_repeat Simple_repeat 1 25 0 8 1022 385 351 38 87 chr17 57303625 57303809 -37968842 + B4A SINE B4 2 176 -116 8 1022 252 0 0 0 chr17 57303811 57303839 -37968812 + (CA)n Simple_repeat Simple_repeat 1 28 0 8 1022 865 156 0 39 chr17 57303891 57304045 -37968606 + B1_Mur4 SINE Alu 3 150 0 8 1022 203 0 37 0 chr17 57304087 57304114 -37968537 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 8 1022 445 172 81 0 chr17 57304118 57304205 -37968446 + PB1D10 SINE Alu 24 117 0 8 1022 254 298 0 23 chr17 57304602 57304688 -37967963 + G-rich Low_complexity Low_complexity 3 86 0 8 1022 447 226 79 24 chr17 57304966 57305093 -37967558 - RLTR23 LTR ERV1 0 430 297 8 1022 1083 290 44 26 chr17 57305149 57305493 -37967158 + RLTR22_Mur LTR ERVK 456 805 -1043 8 1022 320 287 63 11 chr17 57305547 57305642 -37967009 + RLTR22_Mur LTR ERVK 1601 1700 -148 8 1022 392 247 0 11 chr17 57305780 57305874 -37966777 - RSINE1 SINE B4 -70 95 3 8 1022 1274 127 82 10 chr17 57305966 57306173 -37966478 - URR1A DNA MER1_type 0 226 5 8 1022 325 261 51 12 chr17 57306176 57306320 -37966331 - MTE2a LTR MaLR -1 418 235 8 1022 621 114 23 0 chr17 57306746 57306834 -37965817 + B1_Mus2 SINE Alu 55 144 -3 8 1022 354 175 0 0 chr17 57306834 57306914 -37965737 + (TCCA)n Simple_repeat Simple_repeat 1 80 0 8 1022 201 367 0 0 chr17 57306924 57307003 -37965648 + (TG)n Simple_repeat Simple_repeat 1 79 0 8 1022 247 324 14 0 chr17 57307005 57307079 -37965572 - B4A SINE B4 -1 291 217 8 1022 247 309 15 0 chr17 57307132 57307200 -37965451 - B4A SINE B4 -1 291 223 8 1022 1057 38 8 0 chr17 57307226 57307357 -37965294 - B1_Mus1 SINE Alu 0 148 17 8 1022 463 235 67 95 chr17 57307229 57307408 -37965243 - B4 SINE B4 -69 223 50 8 1022 3266 182 57 25 chr17 57307465 57308245 -37964406 + RMER1B Other Other 178 1065 -1 8 1022 1264 233 28 24 chr17 57308246 57308536 -37964115 + RodERV21-int LTR ERV1 2128 2418 -2573 8 1022 1037 199 0 11 chr17 57308537 57308725 -37963926 + RMER13B LTR ERVK 659 844 -64 8 1022 1258 181 204 31 chr17 57308720 57309044 -37963607 - RMER13A LTR ERVK -480 380 1 8 1022 457 194 108 39 chr17 57309266 57309368 -37963283 - B1_Mur2 SINE Alu -31 118 10 8 1022 849 255 60 5 chr17 57309362 57309579 -37963072 - B4A SINE B4 -63 229 1 8 1022 321 266 17 61 chr17 57309797 57309940 -37962711 - RLTR28B LTR ERVL -297 184 2 8 1022 624 201 27 23 chr17 57310336 57310494 -37962157 - RLTR22_Mur LTR ERVK -117 1731 1515 8 1022 583 210 101 7 chr17 57310552 57310691 -37961960 - RLTR22_Mur LTR ERVK -1039 809 658 8 1022 637 312 58 27 chr17 57310691 57310984 -37961667 - Lx9 LINE L1 -1036 6608 6307 8 1022 2393 220 41 42 chr17 57311169 57311434 -37961217 - Lx9 LINE L1 -25 5822 5559 8 1022 4907 166 51 9 chr17 57311434 57312281 -37960370 - RMER19B LTR ERVK 0 902 20 8 1022 198 0 0 0 chr17 57312281 57312303 -37960348 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 8 1022 4907 166 51 9 chr17 57312303 57312321 -37960330 - RMER19B LTR ERVK -883 19 2 8 1022 2393 220 41 42 chr17 57312321 57312761 -37959890 - Lx9 LINE L1 -289 5558 5118 8 1022 253 291 68 0 chr17 57312981 57313098 -37959553 - Lx8 LINE L1 -359 7114 6990 8 1022 321 230 0 0 chr17 57313327 57313427 -37959224 + GA-rich Low_complexity Low_complexity 1 100 0 8 1022 1287 129 0 5 chr17 57314547 57314742 -37957909 + B2_Mm2 SINE B2 2 195 0 8 1022 2244 108 6 0 chr17 57316369 57316685 -37955966 - ORR1A2 LTR MaLR -8 319 2 8 1022 11305 128 54 28 chr17 57316686 57318598 -37954053 - ORR1A2-int LTR MaLR 0 1963 2 8 1022 2349 106 3 0 chr17 57318603 57318925 -37953726 - ORR1A2 LTR MaLR -4 323 1 8 1022 1130 236 74 74 chr17 57318978 57319449 -37953202 + Lx9 LINE L1 6932 7402 -242 8 1022 486 174 0 0 chr17 57319468 57319577 -37953074 + (TG)n Simple_repeat Simple_repeat 1 109 0 8 1022 220 255 0 0 chr17 57319587 57319638 -37953013 + G-rich Low_complexity Low_complexity 6 56 0 8 1022 684 0 0 0 chr17 57319671 57319747 -37952904 + (TTTC)n Simple_repeat Simple_repeat 2 77 0 8 1022 223 227 160 64 chr17 57320234 57320257 -37952394 + B1_Mus2 SINE Alu 15 107 -40 8 1022 374 149 25 75 chr17 57320257 57320317 -37952334 + ID_B1 SINE B4 131 187 -37 8 1022 1470 165 83 35 chr17 57320317 57320631 -37952020 - ORR1A4 LTR MaLR 0 329 1 8 1022 598 256 0 8 chr17 57320760 57320882 -37951769 + RSINE1 SINE B4 2 122 -43 8 1022 929 155 7 7 chr17 57321090 57321239 -37951412 - B1_Mur2 SINE Alu 0 149 1 8 1022 862 151 7 35 chr17 57321276 57321420 -37951231 + B1_Mur2 SINE Alu 5 144 -5 8 1022 36 40 0 0 chr17 57321454 57321504 -37951147 + AT_rich Low_complexity Low_complexity 1 50 0 8 1022 342 251 168 21 chr17 57321504 57321695 -37950956 - Lx8 LINE L1 0 7473 7255 8 1022 302 286 55 0 chr17 57321830 57321921 -37950730 + B4A SINE B4 2 97 -195 8 1022 360 240 0 0 chr17 57321942 57322063 -37950588 + GA-rich Low_complexity Low_complexity 1 121 0 8 1022 396 312 9 0 chr17 57322640 57322749 -37949902 - PB1D10 SINE Alu -6 111 2 8 1022 1114 296 62 22 chr17 57322994 57323364 -37949287 + MTD LTR MaLR 21 405 -14 8 1022 199 191 21 21 chr17 57323521 57323569 -37949082 + L3 LINE CR1 3319 3366 -1123 8 1022 1377 12 18 0 chr17 57323649 57323820 -37948831 + (TCTA)n Simple_repeat Simple_repeat 2 175 0 8 1022 250 291 52 104 chr17 57324077 57324269 -37948382 - RMER15 LTR ERVL 0 575 394 8 1022 275 276 179 0 chr17 57324269 57324403 -37948248 - Lx8 LINE L1 -278 7195 7038 8 1022 2690 75 3 11 chr17 57324628 57324977 -37947674 + ORR1A1 LTR MaLR 1 346 0 8 1022 606 293 32 10 chr17 57325133 57325388 -37947263 - MTE2b LTR MaLR 0 379 66 8 1022 651 297 50 0 chr17 57325386 57325568 -37947083 + B4 SINE B4 102 292 0 8 1022 405 90 0 0 chr17 57325599 57325666 -37946985 + (CA)n Simple_repeat Simple_repeat 2 68 0 8 1022 429 20 0 0 chr17 57325666 57325715 -37946936 + (GA)n Simple_repeat Simple_repeat 2 51 0 8 1022 744 127 114 43 chr17 57325760 57325900 -37946751 - B1_Mur4 SINE Alu 0 150 1 8 1022 306 0 0 0 chr17 57325981 57326015 -37946636 + (T)n Simple_repeat Simple_repeat 1 34 0 8 1022 633 63 0 3 chr17 57326015 57326111 -37946540 - B1_Mur4 SINE Alu 0 150 56 8 1022 671 215 143 22 chr17 57326417 57326565 -37946086 - Lx8 LINE L1 -2 7471 7297 8 1022 1333 198 142 57 chr17 57326565 57326918 -37945733 - ORR1C2 LTR MaLR 0 384 2 8 1022 1799 275 169 7 chr17 57326918 57327580 -37945071 - Lx8 LINE L1 -177 7296 6536 8 1022 489 223 29 0 chr17 57327588 57327691 -37944960 - Lx8 LINE L1 -1080 6393 6288 8 1022 341 260 38 34 chr17 57327777 57327906 -37944745 - MIR SINE MIR -106 170 32 8 1022 266 125 0 59 chr17 57328768 57328819 -37943832 + ID_B1 SINE B4 175 222 -2 8 1022 33 0 0 0 chr17 57328885 57328918 -37943733 + AT_rich Low_complexity Low_complexity 1 33 0 8 1022 820 245 48 39 chr17 57328968 57329176 -37943475 - B4A SINE B4 -81 211 2 8 1022 208 167 71 36 chr17 57329327 57329383 -37943268 + CT-rich Low_complexity Low_complexity 3 60 0 8 1022 524 250 231 6 chr17 57330703 57330876 -37941775 + ID_B1 SINE B4 6 217 -7 8 1022 230 159 0 22 chr17 57330876 57330921 -37941730 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 1022 704 284 32 84 chr17 57330929 57331237 -37941414 - B4A SINE B4 0 292 1 8 1022 231 230 127 115 chr17 57331273 57331356 -37941295 + Tigger7 DNA MER2_type 2311 2408 -83 8 1022 347 172 128 92 chr17 57331356 57331465 -37941186 + PB1D9 SINE Alu 1 113 -7 8 1022 438 65 0 0 chr17 57331469 57331531 -37941120 + (CCAA)n Simple_repeat Simple_repeat 2 63 0 9 1022 231 230 127 115 chr17 57331531 57331599 -37941052 + Tigger7 DNA MER2_type 2409 2469 -22 8 1022 466 272 66 0 chr17 57331689 57331825 -37940826 + RSINE1 SINE B4 4 148 -17 9 1022 306 152 0 0 chr17 57332062 57332121 -37940530 + (TG)n Simple_repeat Simple_repeat 2 60 0 9 1022 605 202 0 9 chr17 57332546 57332661 -37939990 - ID_B1 SINE B4 -2 222 109 9 1022 564 248 62 28 chr17 57332747 57332892 -37939759 + RSINE1 SINE B4 3 152 -13 9 1022 180 178 44 0 chr17 57333138 57333183 -37939468 - MIRc SINE MIR -109 159 113 9 1022 180 0 0 0 chr17 57334053 57334073 -37938578 + (CA)n Simple_repeat Simple_repeat 2 21 0 9 1022 1693 174 235 3 chr17 57335018 57335358 -37937293 + MTC LTR MaLR 1 419 0 9 1022 892 239 35 109 chr17 57335359 57335588 -37937063 + MTC-int LTR MaLR 2 224 -1034 9 1022 524 231 112 30 chr17 57335588 57335722 -37936929 + B1_Mur2 SINE Alu 3 147 -2 9 1022 2830 211 70 93 chr17 57335722 57336059 -37936592 + MTC-int LTR MaLR 225 771 -487 9 1022 225 0 0 0 chr17 57336059 57336084 -37936567 + (CAG)n Simple_repeat Simple_repeat 1 25 0 9 1022 2830 154 39 80 chr17 57336084 57336482 -37936169 + MTC-int LTR MaLR 772 1152 -106 9 1022 735 184 280 0 chr17 57336482 57336650 -37936001 - B3 SINE B2 0 216 2 9 1022 2830 154 39 80 chr17 57336650 57336763 -37935888 + MTC-int LTR MaLR 1153 1254 -4 9 1022 2719 149 5 19 chr17 57336768 57337193 -37935458 + MTC LTR MaLR 2 420 -1 9 1022 872 258 122 30 chr17 57337194 57337490 -37935161 - MTE2b LTR MaLR -56 323 1 9 1022 675 322 41 20 chr17 57337724 57338016 -37934635 - RMER15 LTR ERVL -13 562 265 9 1022 320 241 6 0 chr17 57338019 57338177 -37934474 + (TG)n Simple_repeat Simple_repeat 2 160 0 9 1022 415 272 12 17 chr17 57338192 57338529 -37934122 + (TG)n Simple_repeat Simple_repeat 1 335 0 9 1022 44 20 0 0 chr17 57338581 57338632 -37934019 + AT_rich Low_complexity Low_complexity 1 51 0 9 1022 2283 59 69 0 chr17 57338632 57338921 -37933730 - L1_Mus1 LINE L1 0 6567 6259 9 1022 334 373 54 0 chr17 57338951 57339136 -37933515 - B3A SINE B2 -1 197 3 9 1022 461 248 3 57 chr17 57339159 57339747 -37932904 + CT-rich Low_complexity Low_complexity 1 556 0 9 1022 434 241 0 63 chr17 57339763 57340011 -37932640 + CT-rich Low_complexity Low_complexity 1 232 0 9 1022 438 267 0 53 chr17 57340042 57340397 -37932254 + CT-rich Low_complexity Low_complexity 1 336 0 9 1022 248 209 70 0 chr17 57340301 57340430 -37932221 + (TCCA)n Simple_repeat Simple_repeat 3 140 0 9 1022 1944 302 132 38 chr17 57340624 57341668 -37930983 + Lx8 LINE L1 5881 7022 -451 9 1022 737 140 87 14 chr17 57341694 57341832 -37930819 - MTC LTR MaLR -1 420 273 9 1022 633 38 0 0 chr17 57341993 57342073 -37930578 + (TG)n Simple_repeat Simple_repeat 2 81 0 9 1022 782 279 74 28 chr17 57342548 57342832 -37929819 - RLTR16 LTR ERVK -208 297 1 9 1022 611 240 53 9 chr17 57342843 57343004 -37929647 + B3A SINE B2 22 193 -23 9 1022 468 262 122 64 chr17 57343004 57343208 -37929443 + B3 SINE B2 1 216 0 9 1022 594 136 185 8 chr17 57343225 57343344 -37929307 + B1_Mur3 SINE Alu 9 148 -1 9 1022 218 105 0 26 chr17 57343344 57343383 -37929268 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 9 1022 502 286 70 20 chr17 57344182 57344382 -37928269 - B4A SINE B4 -80 212 3 9 1022 322 320 68 43 chr17 57344382 57344495 -37928156 + RMER15 LTR ERVL 405 521 -54 9 1022 210 37 0 0 chr17 57344503 57344530 -37928121 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 1022 234 277 58 35 chr17 57346227 57346313 -37926338 + MLT1A1 LTR MaLR 320 407 -1 9 1022 314 293 72 12 chr17 57346369 57346452 -37926199 + PB1D10 SINE Alu 14 101 -16 9 1022 320 236 42 0 chr17 57346499 57346571 -37926080 + MLT1J2 LTR MaLR 245 319 -129 9 1022 486 237 101 29 chr17 57347208 57347347 -37925304 + B1F SINE Alu 1 149 0 9 1022 216 0 0 0 chr17 57347362 57347386 -37925265 + (CTAAA)n Simple_repeat Simple_repeat 3 26 0 9 1022 328 304 0 82 chr17 57347444 57347566 -37925085 + B4 SINE B4 12 123 -169 9 1022 424 278 83 0 chr17 57347573 57347694 -37924957 + B4 SINE B4 98 229 -63 9 1022 625 269 14 14 chr17 57347694 57347837 -37924814 + RSINE1 SINE B4 3 145 -20 9 1022 372 43 0 0 chr17 57347853 57347899 -37924752 + (CA)n Simple_repeat Simple_repeat 1 46 0 9 1022 839 286 77 54 chr17 57348173 57348569 -37924082 + RLTR26 LTR ERVK 4 447 -195 9 1022 842 212 20 0 chr17 57349203 57349354 -37923297 + B4 SINE B4 116 269 -23 9 1022 669 97 0 0 chr17 57349354 57349457 -37923194 + (CA)n Simple_repeat Simple_repeat 2 104 0 9 1022 186 103 0 0 chr17 57349547 57349576 -37923075 + (G)n Simple_repeat Simple_repeat 1 29 0 9 1022 997 282 90 25 chr17 57351278 57351601 -37921050 + MTE2b LTR MaLR 35 378 -1 9 1022 302 254 92 42 chr17 57352843 57352962 -37919689 + RMER15 LTR ERVL 314 438 -137 9 1022 586 190 0 25 chr17 57353029 57353148 -37919503 + MTD LTR MaLR 282 397 -22 9 1022 328 237 40 0 chr17 57353561 57353637 -37919014 - Tigger5 DNA MER2_type -4 2402 2324 9 1022 961 254 99 27 chr17 57353640 57353903 -37918748 + B4 SINE B4 1 282 -10 9 1022 1938 186 47 11 chr17 57355894 57356259 -37916392 + ORR1C1 LTR MaLR 1 378 0 9 1022 276 281 99 58 chr17 57356265 57356386 -37916265 - MIR SINE MIR -108 154 29 9 1022 335 289 72 0 chr17 57356836 57356933 -37915718 + MIR SINE MIR 65 168 -94 9 1022 449 253 0 6 chr17 57356951 57357130 -37915521 + (TG)n Simple_repeat Simple_repeat 1 178 0 9 1022 195 272 13 6 chr17 57357142 57357301 -37915350 + (TG)n Simple_repeat Simple_repeat 1 160 0 9 1022 477 279 351 41 chr17 57357350 57357572 -37915079 - B4A SINE B4 -1 291 1 9 1022 441 257 19 9 chr17 57357592 57357698 -37914953 - PB1D10 SINE Alu -10 107 1 9 1022 300 243 0 63 chr17 57358573 57358652 -37913999 - B4A SINE B4 0 292 219 9 1022 376 193 10 93 chr17 57358649 57358667 -37913984 - B3A SINE B2 -5 193 177 9 1022 428 0 19 0 chr17 57358667 57358719 -37913932 + (CA)n Simple_repeat Simple_repeat 1 53 0 9 1022 376 193 10 93 chr17 57358719 57358797 -37913854 - B3A SINE B2 -22 176 105 9 1022 483 190 182 41 chr17 57358784 57358954 -37913697 - B4 SINE B4 -98 194 1 9 1022 350 252 114 64 chr17 57359362 57359502 -37913149 - RSINE1 SINE B4 0 165 19 9 1022 231 339 8 87 chr17 57359811 57359937 -37912714 - MT2B LTR ERVL -319 282 167 9 1022 566 254 0 0 chr17 57359825 57359939 -37912712 - B1F SINE Alu -35 114 1 9 1022 707 239 0 36 chr17 57360921 57361086 -37911565 + RSINE1 SINE B4 7 165 0 9 1022 310 154 26 0 chr17 57361086 57361164 -37911487 + (CA)n Simple_repeat Simple_repeat 1 80 0 9 1022 346 347 13 0 chr17 57361828 57361978 -37910673 + GA-rich Low_complexity Low_complexity 2 153 0 9 1022 469 218 0 68 chr17 57362003 57362121 -37910530 + B1_Mur2 SINE Alu 40 149 0 9 1022 627 51 0 0 chr17 57362127 57362206 -37910445 + (GA)n Simple_repeat Simple_repeat 2 80 0 9 1022 918 283 113 15 chr17 57362827 57363154 -37909497 + MTE2b LTR MaLR 1 359 -20 9 1022 430 258 53 1 chr17 57364804 57364940 -37907711 + MIR SINE MIR 13 162 -106 9 1022 456 298 21 7 chr17 57366592 57366734 -37905917 - B1F SINE Alu -1 148 5 9 1022 498 17 0 0 chr17 57366954 57367013 -37905638 + (TATG)n Simple_repeat Simple_repeat 4 62 0 9 1022 721 257 89 12 chr17 57367016 57367264 -37905387 - B4A SINE B4 -25 267 1 9 1022 747 143 131 0 chr17 57367885 57368053 -37904598 + URR1A DNA MER1_type 37 226 0 9 1022 196 301 14 14 chr17 57368231 57368305 -37904346 - L2c LINE L2 -220 3167 3094 9 1022 684 211 34 7 chr17 57368614 57368762 -37903889 + ID_B1 SINE B4 60 211 -13 9 1022 690 220 163 11 chr17 57368775 57368806 -37903845 - B3 SINE B2 -2 214 183 9 1022 993 17 0 0 chr17 57368806 57368921 -37903730 + (TATG)n Simple_repeat Simple_repeat 4 118 0 9 1022 690 220 163 11 chr17 57368921 57369073 -37903578 - B3 SINE B2 -34 182 4 9 1022 314 156 229 62 chr17 57369634 57369730 -37902921 - PB1D9 SINE Alu -8 112 1 9 1022 361 283 86 77 chr17 57369746 57369968 -37902683 - ID_B1 SINE B4 0 224 1 9 1022 183 129 0 0 chr17 57370434 57370465 -37902186 + (GGGGA)n Simple_repeat Simple_repeat 2 32 0 9 1022 508 252 47 16 chr17 57370685 57370814 -37901837 - RSINE1 SINE B4 -31 134 2 9 1022 350 326 11 0 chr17 57371402 57371497 -37901154 + PB1D10 SINE Alu 3 98 -19 9 1022 399 329 53 85 chr17 57371512 57371758 -37900893 + B4A SINE B4 55 292 0 9 1022 831 129 0 0 chr17 57371778 57371933 -37900718 + (CA)n Simple_repeat Simple_repeat 1 155 0 9 1022 405 255 40 10 chr17 57371951 57372050 -37900601 + PB1D7 SINE Alu 11 112 -8 9 1022 414 235 130 0 chr17 57372059 57372174 -37900477 + ID_B1 SINE B4 82 211 -13 9 1022 304 258 148 0 chr17 57372174 57372187 -37900464 + B1_Mus2 SINE Alu 1 147 0 9 1022 309 159 16 16 chr17 57372262 57372326 -37900325 + B1_Mur2 SINE Alu 35 98 -51 9 1022 261 70 35 17 chr17 57372959 57373017 -37899634 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 9 1022 453 302 0 0 chr17 57373682 57373788 -37898863 - PB1D7 SINE Alu -13 107 2 9 1022 619 319 37 77 chr17 57373851 57374150 -37898501 - B4 SINE B4 -4 288 2 9 1022 18321 72 21 4 chr17 57377928 57380964 -37891687 + L1VL4 LINE L1 766 3912 0 9 1022 297 0 0 0 chr17 57381073 57381106 -37891545 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 1022 270 288 70 26 chr17 57381110 57381224 -37891427 + RSINE1 SINE B4 41 159 -6 9 1022 360 278 113 20 chr17 57381275 57381452 -37891199 + B4 SINE B4 1 227 -65 9 1022 694 186 54 0 chr17 57381452 57381581 -37891070 + B1_Mur1 SINE Alu 1 136 -13 9 1022 204 40 0 0 chr17 57381581 57381606 -37891045 + (CAAAC)n Simple_repeat Simple_repeat 1 25 0 9 1022 786 176 7 0 chr17 57381841 57381977 -37890674 + RSINE1 SINE B4 4 140 -25 9 1022 2865 146 53 21 chr17 57382600 57383319 -37889332 + RMER12 LTR ERVK 14 688 -716 9 1022 207 0 0 0 chr17 57383322 57383345 -37889306 + (TG)n Simple_repeat Simple_repeat 1 23 0 9 1022 697 231 72 67 chr17 57383350 57383573 -37889078 + RMER12 LTR ERVK 996 1219 -103 9 1022 233 201 0 98 chr17 57383573 57383643 -37889008 + RMER12 LTR ERVK 1524 1572 0 9 1022 494 216 23 31 chr17 57384030 57384159 -37888492 + B1F SINE Alu 21 148 -1 9 1022 261 312 70 86 chr17 57384134 57384320 -37888331 + ZP3AR Satellite Satellite 16 198 -14 9 1022 221 286 29 0 chr17 57384272 57384342 -37888309 + ID4_ SINE ID 1 72 -11 1 1022 306 0 0 0 chr17 57384348 57384382 -37888269 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1022 296 295 0 110 chr17 57384836 57384954 -37887697 - B1F1 SINE Alu 0 149 45 1 1022 238 317 98 10 chr17 57385098 57385200 -37887451 + PB1D10 SINE Alu 2 112 -5 1 1022 312 166 241 20 chr17 57385220 57385317 -37887334 + B1_Mur2 SINE Alu 2 111 -9 1 1022 249 205 203 51 chr17 57385221 57385339 -37887312 + ID_B1 SINE B4 84 219 -5 1 1022 459 207 24 196 chr17 57385344 57385560 -37887091 + Lx8 LINE L1 6937 7163 -481 1 1022 226 246 70 43 chr17 57385561 57385676 -37886975 - LTR86C LTR ERVL -135 486 369 1 1022 198 0 0 0 chr17 57385689 57385711 -37886940 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 1022 600 164 34 17 chr17 57385713 57385831 -37886820 + B1_Mur1 SINE Alu 17 136 -13 1 1022 198 0 0 0 chr17 57385831 57385853 -37886798 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1022 241 211 59 59 chr17 57385853 57385954 -37886697 + Lx8 LINE L1 7352 7452 -21 1 1022 187 309 62 0 chr17 57386087 57386168 -37886483 - MIRc SINE MIR -151 117 32 1 1022 261 119 0 0 chr17 57388253 57388295 -37884356 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1022 549 252 50 0 chr17 57390714 57390833 -37881818 - RSINE1 SINE B4 -38 127 3 1 1022 187 222 44 0 chr17 57390933 57390978 -37881673 + MIR SINE MIR 116 162 -100 1 1022 478 256 139 0 chr17 57391022 57391151 -37881500 + ID_B1 SINE B4 70 216 -8 1 1022 180 0 0 0 chr17 57391155 57391175 -37881476 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1 1022 323 321 75 0 chr17 57391250 57391356 -37881295 + PB1D10 SINE Alu 1 114 -3 1 1022 342 0 0 0 chr17 57391479 57391517 -37881134 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1022 405 0 0 0 chr17 57391517 57391561 -37881090 + (GA)n Simple_repeat Simple_repeat 1 45 0 1 1022 563 165 0 0 chr17 57391576 57391673 -37880978 - ID_B1 SINE B4 -19 205 109 1 1022 515 152 56 28 chr17 57391673 57391684 -37880967 - B1F SINE Alu -19 130 20 1 1022 483 299 110 9 chr17 57391754 57391973 -37880678 + MER2 DNA MER2_type 99 339 -6 1 1022 461 284 0 25 chr17 57392007 57392126 -37880525 + PB1D10 SINE Alu 1 116 -1 1 1022 489 217 65 19 chr17 57392185 57392293 -37880358 + PB1D9 SINE Alu 2 114 -6 1 1022 267 316 10 21 chr17 57392407 57392504 -37880147 + CT-rich Low_complexity Low_complexity 2 97 0 1 1022 467 273 68 0 chr17 57392506 57392638 -37880013 - ID_B1 SINE B4 0 224 84 1 1022 353 311 105 86 chr17 57393161 57393323 -37879328 - RSINE1 SINE B4 0 165 1 1 1022 266 194 43 29 chr17 57393323 57393392 -37879259 - PB1D10 SINE Alu 0 117 48 1 1022 396 175 0 56 chr17 57393903 57394009 -37878642 + B1_Mur2 SINE Alu 43 141 -8 1 1022 255 281 0 0 chr17 57394014 57394071 -37878580 + GA-rich Low_complexity Low_complexity 1 57 0 1 1022 204 266 0 30 chr17 57395338 57395404 -37877247 + T-rich Low_complexity Low_complexity 1 64 0 1 1022 371 317 88 20 chr17 57395610 57395758 -37876893 - RSINE1 SINE B4 -6 159 2 1 1022 473 260 73 0 chr17 57395935 57396058 -37876593 - RSINE1 SINE B4 -33 132 1 1 1022 547 268 126 23 chr17 57396973 57397187 -37875464 - B4A SINE B4 -56 236 1 1 1022 387 0 0 0 chr17 57397240 57397283 -37875368 + (TTA)n Simple_repeat Simple_repeat 3 45 0 1 1022 3333 110 55 8 chr17 57397296 57397782 -37874869 - Lx3B LINE L1 -5 6968 6458 1 1022 520 212 144 0 chr17 57397782 57397900 -37874751 - B1_Mur1 SINE Alu -14 135 1 1 1022 602 285 109 10 chr17 57397915 57398117 -37874534 - B4A SINE B4 -68 224 3 1 1022 465 261 27 9 chr17 57398153 57398265 -37874386 + PB1D10 SINE Alu 1 114 -3 1 1022 348 244 88 11 chr17 57398414 57398505 -37874146 + RSINE1 SINE B4 7 104 -61 1 1022 292 227 13 0 chr17 57398720 57398795 -37873856 - ZP3AR Satellite Satellite -99 113 38 1 1022 810 169 7 14 chr17 57398830 57398968 -37873683 - B1_Mur4 SINE Alu -13 137 1 1 1022 275 323 97 8 chr17 57398968 57398985 -37873666 - ID_B1 SINE B4 0 224 170 1 1022 367 228 109 0 chr17 57398985 57399077 -37873574 - PB1 SINE Alu -2 125 24 1 1022 275 323 97 8 chr17 57399077 57399102 -37873549 - ID_B1 SINE B4 0 169 79 1 1022 630 300 0 24 chr17 57399601 57399765 -37872886 - RSINE1 SINE B4 -4 161 2 1 1022 210 231 0 19 chr17 57399774 57399827 -37872824 - PB1 SINE Alu 0 127 76 1 1022 662 261 92 70 chr17 57399989 57400261 -37872390 - B4A SINE B4 -12 280 3 1 1022 672 253 96 5 chr17 57400261 57400455 -37872196 - B4A SINE B4 -64 228 17 1 1022 438 214 49 20 chr17 57400471 57400608 -37872043 - B1F SINE Alu 0 149 3 1 1022 198 0 0 0 chr17 57400676 57400698 -37871953 + (TCTG)n Simple_repeat Simple_repeat 2 23 0 1 1022 883 164 95 2 chr17 57401250 57401732 -37870919 + ZP3AR Satellite Satellite 1 526 -1 1 1022 227 333 0 27 chr17 57401954 57402028 -37870623 + ID4_ SINE ID 12 83 0 1 1022 583 249 23 4 chr17 57402185 57402332 -37870319 - MTEa LTR MaLR -202 177 33 1 1022 27 29 0 0 chr17 57402816 57402850 -37869801 + AT_rich Low_complexity Low_complexity 1 34 0 1 1022 228 288 53 113 chr17 57403431 57403564 -37869087 + YREP_Mm Unknown Unknown 172 296 -1516 1 1022 546 252 34 0 chr17 57403465 57403584 -37869067 - ID_B1 SINE B4 -21 203 81 1 1022 647 215 185 66 chr17 57405975 57406234 -37866417 - B4 SINE B4 0 292 3 1 1022 965 147 6 0 chr17 57406237 57406407 -37866244 + CT-rich Low_complexity Low_complexity 2 172 0 1 1022 245 309 10 31 chr17 57406407 57406504 -37866147 - PB1D10 SINE Alu -1 116 22 1 1022 481 182 50 0 chr17 57406874 57406973 -37865678 + ID_B1 SINE B4 112 215 -9 1 1022 633 262 5 94 chr17 57407413 57407615 -37865036 - ZP3AR Satellite Satellite -26 186 3 1 1022 739 217 7 0 chr17 57407764 57407907 -37864744 - B1_Mur1 SINE Alu 0 149 6 1 1022 363 279 13 111 chr17 57407806 57407959 -37864692 - MT2B LTR ERVL -341 260 123 1 1022 321 48 0 0 chr17 57407958 57408000 -37864651 + U2 snRNA snRNA 1 42 -146 1 1022 756 262 36 40 chr17 57408569 57408816 -37863835 + MTD LTR MaLR 5 250 -169 1 1022 321 208 0 0 chr17 57409014 57409086 -37863565 + (TG)n Simple_repeat Simple_repeat 1 72 0 1 1022 722 294 27 58 chr17 57409116 57409340 -37863311 - B4A SINE B4 -10 282 66 1 127 475 264 40 12 chr17 57409472 57409689 -37862962 - L1MA4 LINE L1 -194 5962 5748 1 1023 339 85 0 0 chr17 57409871 57409918 -37862733 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1023 183 188 0 0 chr17 57409964 57410012 -37862639 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1023 739 230 0 0 chr17 57410013 57410152 -37862499 - B1_Mur1 SINE Alu -10 139 1 1 1023 283 233 41 0 chr17 57410168 57410241 -37862410 - ID4_ SINE ID -6 77 2 1 1023 27 73 0 0 chr17 57410290 57410345 -37862306 + AT_rich Low_complexity Low_complexity 1 55 0 1 1023 371 239 38 13 chr17 57410362 57410478 -37862173 - MTD LTR MaLR -16 403 259 1 1023 2215 229 45 114 chr17 57410474 57411548 -37861103 - RMER17B LTR ERVK -9 899 2 1 1023 677 239 14 0 chr17 57411590 57411732 -37860919 + B3A SINE B2 2 145 -53 1 1023 227 261 29 0 chr17 57411878 57411947 -37860704 - MTD LTR MaLR -219 200 130 1 1023 276 254 67 9 chr17 57412049 57412145 -37860506 + B1F SINE Alu 15 108 -12 1 1023 248 232 29 14 chr17 57412504 57412574 -37860077 + RLTR24 LTR ERV1 385 455 -74 1 1023 261 171 3 0 chr17 57412608 57412660 -37859991 + PB1D7 SINE Alu 58 113 -7 1 1023 777 208 126 10 chr17 57412788 57412987 -37859664 - ID_B1 SINE B4 -1 223 2 1 1023 306 0 0 0 chr17 57413171 57413205 -37859446 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1023 288 0 0 0 chr17 57413205 57413237 -37859414 + (TCTG)n Simple_repeat Simple_repeat 2 33 0 1 1023 207 0 0 0 chr17 57413395 57413418 -37859233 + (GGGTG)n Simple_repeat Simple_repeat 4 26 0 1 1023 43 64 0 0 chr17 57414032 57414110 -37858541 + AT_rich Low_complexity Low_complexity 1 78 0 1 1023 484 283 7 33 chr17 57414117 57414267 -37858384 - RSINE1 SINE B4 -18 147 2 1 1023 426 176 0 0 chr17 57415101 57415186 -37857465 + (TG)n Simple_repeat Simple_repeat 2 86 0 1 1023 313 216 26 39 chr17 57415879 57415956 -37856695 + ID_B1 SINE B4 132 207 -17 1 1023 315 328 48 55 chr17 57416053 57416198 -37856453 - MIR SINE MIR -71 191 48 1 1023 453 258 129 86 chr17 57416773 57417041 -37855610 + B4 SINE B4 1 281 -11 1 1023 465 19 0 0 chr17 57417041 57417095 -37855556 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 1023 453 258 129 86 chr17 57417095 57417106 -37855545 + B4 SINE B4 282 292 0 1 1023 645 259 0 107 chr17 57417144 57417242 -37855409 + RSINE1 SINE B4 8 92 -73 1 1023 1432 45 79 0 chr17 57417242 57417401 -37855250 + B2_Mm1a SINE B2 2 160 -33 1 1023 207 0 0 0 chr17 57417401 57417424 -37855227 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 1 1023 1432 45 79 0 chr17 57417424 57417442 -37855209 + B2_Mm1a SINE B2 161 191 -2 1 1023 645 259 0 107 chr17 57417442 57417520 -37855131 + RSINE1 SINE B4 93 165 0 1 1023 189 214 0 0 chr17 57417520 57417562 -37855089 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 1023 669 229 122 6 chr17 57417795 57417975 -37854676 - Lx8 LINE L1 -359 7114 6914 1 1023 224 229 16 16 chr17 57419131 57419193 -37853458 + CT-rich Low_complexity Low_complexity 3 64 0 1 1023 656 236 6 0 chr17 57420780 57420958 -37851693 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 1 1023 243 0 0 0 chr17 57420968 57420995 -37851656 + (CAGC)n Simple_repeat Simple_repeat 1 27 0 1 1023 530 311 108 46 chr17 57421011 57421399 -37851252 + RMER10A LTR ERVL 12 423 -19 1 1023 200 69 16 79 chr17 57421412 57421475 -37851176 + A-rich Low_complexity Low_complexity 4 62 0 1 1023 324 0 0 0 chr17 57421475 57421511 -37851140 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1023 546 124 0 0 chr17 57421517 57421606 -37851045 + (TCCA)n Simple_repeat Simple_repeat 3 91 0 1 1023 226 252 59 20 chr17 57421618 57421719 -37850932 - L1ME2z LINE L1 -69 6375 6271 1 1023 267 362 0 11 chr17 57421733 57421828 -37850823 + (TCCA)n Simple_repeat Simple_repeat 3 96 0 1 1023 252 0 0 0 chr17 57422109 57422137 -37850514 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 1023 438 205 161 0 chr17 57422719 57422831 -37849820 + B4A SINE B4 151 280 -12 1 1023 355 321 55 0 chr17 57423492 57423601 -37849050 - ID_B1 SINE B4 -93 131 17 1 1023 262 341 52 15 chr17 57423649 57423783 -37848868 + MER20 DNA MER1_type 16 154 -65 1 1023 1322 223 146 0 chr17 57423897 57424220 -37848431 - ORR1D2 LTR MaLR 0 370 1 1 1023 1071 207 75 99 chr17 57424220 57424551 -37848100 - MTE2b LTR MaLR -56 323 1 1 1023 379 229 36 9 chr17 57424637 57424747 -37847904 - ZP3AR Satellite Satellite -77 135 23 1 1023 411 302 79 18 chr17 57424843 57425072 -37847579 + L2a LINE L2 2918 3160 -266 1 1023 258 247 0 64 chr17 57425145 57425223 -37847428 - B4A SINE B4 0 292 220 1 1023 445 315 78 52 chr17 57425233 57425424 -37847227 - B3A SINE B2 -2 196 1 1 1023 577 214 65 52 chr17 57425440 57425593 -37847058 - B4A SINE B4 -127 165 11 1 1023 544 325 62 0 chr17 57425663 57425872 -37846779 - MER2 DNA MER2_type -2 343 122 1 1023 368 229 0 0 chr17 57425920 57425990 -37846661 - ID_B1 SINE B4 -7 217 148 1 1023 226 246 46 62 chr17 57425992 57426057 -37846594 + B4A SINE B4 217 280 -12 1 1023 747 93 0 0 chr17 57426112 57426230 -37846421 + (CA)n Simple_repeat Simple_repeat 2 119 0 1 1023 190 270 52 73 chr17 57426570 57426666 -37845985 - L2c LINE L2 -1 3386 3293 1 1023 444 37 0 0 chr17 57426669 57426723 -37845928 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1023 521 267 102 0 chr17 57426807 57426878 -37845773 + B4A SINE B4 13 83 -209 1 1023 333 0 0 0 chr17 57426878 57426915 -37845736 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1 1023 521 267 102 0 chr17 57426915 57427019 -37845632 + B4A SINE B4 84 205 -87 1 1023 204 208 0 0 chr17 57427025 57427073 -37845578 + C-rich Low_complexity Low_complexity 1 48 0 1 1023 376 250 0 0 chr17 57427075 57427159 -37845492 + B4 SINE B4 206 289 -3 1 1023 296 341 37 63 chr17 57427234 57427372 -37845279 + MER2 DNA MER2_type 152 286 -59 1 1023 216 0 0 0 chr17 57427372 57427396 -37845255 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 1 1023 296 341 37 63 chr17 57427396 57427448 -37845203 + MER2 DNA MER2_type 287 337 -8 1 1023 525 274 195 10 chr17 57427484 57427674 -37844977 + B4A SINE B4 1 227 -65 1 1023 801 204 74 0 chr17 57427674 57427836 -37844815 + B3A SINE B2 1 174 -24 1 1023 480 200 36 0 chr17 57427834 57427944 -37844707 - ZP3AR Satellite Satellite -57 155 42 1 1023 1287 41 0 0 chr17 57428040 57428187 -37844464 - B1_Mus2 SINE Alu 0 147 1 1 1023 219 371 108 39 chr17 57428443 57428572 -37844079 + L2b LINE L2 3238 3375 0 1 1023 313 349 16 0 chr17 57428630 57428756 -37843895 + CT-rich Low_complexity Low_complexity 5 132 0 1 1023 1134 285 100 55 chr17 57428762 57429312 -37843339 - RMER15 LTR ERVL 0 575 1 1 1023 547 239 14 35 chr17 57429384 57429527 -37843124 - B1F1 SINE Alu -7 142 3 1 1023 311 304 38 97 chr17 57429527 57429561 -37843090 - B4 SINE B4 -64 196 54 1 1023 192 302 95 58 chr17 57430625 57430762 -37841889 + MIRc SINE MIR 6 147 -121 1 1023 429 321 69 8 chr17 57430781 57430847 -37841804 - B3A SINE B2 0 216 153 1 1023 234 62 0 0 chr17 57430847 57430879 -37841772 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1023 429 310 75 0 chr17 57430879 57431011 -37841640 - B3A SINE B2 -43 155 11 1 1023 382 326 108 22 chr17 57431182 57431367 -37841284 - Lx8 LINE L1 -123 7350 7150 1 1023 289 313 38 0 chr17 57431429 57431560 -37841091 + L1MC1 LINE L1 6116 6251 -82 1 1023 328 275 0 0 chr17 57431719 57431788 -37840863 + ID_B1 SINE B4 155 223 -1 1 1023 235 301 59 40 chr17 57431791 57431943 -37840708 + B4A SINE B4 2 156 -136 1 1023 401 266 55 31 chr17 57432057 57432220 -37840431 - HAL1-2a_MD LINE L1 -520 2504 2338 1 1023 238 312 223 7 chr17 57432323 57432462 -37840189 - MLT1F1 LTR MaLR -4 565 397 1 1023 813 239 188 8 chr17 57432813 57433058 -37839593 + B4A SINE B4 1 289 -3 1 1023 649 254 166 62 chr17 57433263 57433609 -37839042 + Lx8 LINE L1 6917 7309 -164 1 1023 1041 116 0 20 chr17 57433655 57433805 -37838846 + B1_Mur3 SINE Alu 3 149 0 1 1023 790 240 65 15 chr17 57433819 57434018 -37838633 - B3 SINE B2 -5 211 3 1 1023 912 330 106 23 chr17 57434018 57434545 -37838106 - Lx8 LINE L1 -3 7470 6900 1 1023 695 215 7 0 chr17 57434797 57434932 -37837719 + RSINE1 SINE B4 2 137 -28 1 1023 349 228 83 50 chr17 57434974 57435094 -37837557 + B1F1 SINE Alu 1 124 -25 1 1023 457 261 62 56 chr17 57435116 57435278 -37837373 - RSINE1 SINE B4 0 165 3 1 1023 423 276 0 10 chr17 57436835 57436934 -37835717 - PB1D10 SINE Alu -19 98 1 1 1023 290 305 134 11 chr17 57437219 57437413 -37835238 - L1MB3 LINE L1 -465 5894 5679 1 1023 811 232 80 5 chr17 57437470 57437669 -37834982 - B3 SINE B2 -1 215 2 1 1023 399 295 27 0 chr17 57437700 57437812 -37834839 - PB1D10 SINE Alu 0 117 3 1 1023 327 267 11 65 chr17 57437828 57437897 -37834754 + (TCTCTG)n Simple_repeat Simple_repeat 6 71 0 1 1023 239 73 49 0 chr17 57437897 57437938 -37834713 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 1 1023 327 267 11 65 chr17 57437938 57438052 -37834599 + (TCTCTG)n Simple_repeat Simple_repeat 6 113 0 1 1023 238 316 17 0 chr17 57438355 57438472 -37834179 + (TCTCTG)n Simple_repeat Simple_repeat 5 123 0 1 1023 724 117 39 58 chr17 57438727 57438881 -37833770 - ZP3AR Satellite Satellite -15 197 47 1 1023 266 301 135 24 chr17 57438923 57439049 -37833602 + MIRb SINE MIR 115 254 -14 1 1023 225 284 13 51 chr17 57439534 57439612 -37833039 - B4A SINE B4 -2 290 216 1 1023 1598 47 0 15 chr17 57439627 57439823 -37832828 - B2_Mm1a SINE B2 0 193 1 1 1023 1024 238 9 18 chr17 57439847 57440065 -37832586 - B3 SINE B2 0 216 1 1 1023 451 0 34 0 chr17 57440074 57440133 -37832518 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 1 1023 230 284 108 0 chr17 57440166 57440240 -37832411 - RSINE1 SINE B4 -82 83 2 1 1023 764 228 12 81 chr17 57440240 57440406 -37832245 - B4 SINE B4 -61 231 80 1 1023 216 0 0 0 chr17 57440406 57440430 -37832221 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 1 1023 764 228 12 81 chr17 57440430 57440497 -37832154 - B4 SINE B4 -213 79 15 1 1023 743 254 143 129 chr17 57440744 57441115 -37831536 - MTE2a LTR MaLR -3 376 1 1 1023 403 228 5 21 chr17 57441968 57442078 -37830573 - B1_Mur2 SINE Alu -8 112 1 1 1023 678 25 0 0 chr17 57442678 57442758 -37829893 + (GA)n Simple_repeat Simple_repeat 1 80 0 1 1023 839 214 95 31 chr17 57442805 57442855 -37829796 - B4 SINE B4 -10 282 215 1 1023 458 17 17 0 chr17 57442855 57442914 -37829737 + (TTA)n Simple_repeat Simple_repeat 2 61 0 1 1023 839 214 95 31 chr17 57442914 57443085 -37829566 - B4 SINE B4 -78 214 47 1 1023 343 103 22 44 chr17 57443487 57443578 -37829073 + (CAA)n Simple_repeat Simple_repeat 2 90 0 1 1023 273 262 8 23 chr17 57443719 57443860 -37828791 + CT-rich Low_complexity Low_complexity 1 138 0 1 1023 482 284 54 15 chr17 57443876 57444080 -37828571 - L1MB5 LINE L1 -9 6165 5954 1 1023 248 259 24 12 chr17 57444427 57444509 -37828142 + CT-rich Low_complexity Low_complexity 6 88 0 1 1023 290 321 83 0 chr17 57444510 57444619 -37828032 - PB1D7 SINE Alu -1 119 2 1 1023 694 189 8 0 chr17 57445187 57445314 -37827337 - ZP3AR Satellite Satellite -84 128 1 1 1023 226 216 0 0 chr17 57445408 57445459 -37827192 - L1M5 LINE L1 -648 5525 5475 1 1023 823 231 12 0 chr17 57446075 57446244 -37826407 - ZP3AR Satellite Satellite -2 210 40 1 1023 414 0 0 0 chr17 57446323 57446369 -37826282 + (TC)n Simple_repeat Simple_repeat 1 46 0 1 1023 378 0 0 0 chr17 57446369 57446410 -37826241 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1023 558 274 74 33 chr17 57446984 57447199 -37825452 - Lx8 LINE L1 -9 7464 7241 1 1023 426 257 86 20 chr17 57447266 57447417 -37825234 - RSINE1 SINE B4 -2 163 3 1 1023 466 246 92 0 chr17 57447708 57447838 -37824813 + ZP3AR Satellite Satellite 45 186 -26 1 1023 828 234 82 102 chr17 57448316 57448609 -37824042 - MTE2a LTR MaLR 0 379 101 1 1023 531 243 39 26 chr17 57449130 57449286 -37823365 - HAL1-2a_MD LINE L1 -522 2502 2345 1 1023 424 280 56 67 chr17 57449287 57449482 -37823169 - HAL1-2a_MD LINE L1 -506 2518 2326 1 1023 350 296 36 117 chr17 57449594 57449705 -37822946 + RSINE1 SINE B4 4 105 -60 1 1023 254 247 39 0 chr17 57450341 57450352 -37822299 - L1MB7 LINE L1 -230 5954 5944 1 1023 836 20 10 0 chr17 57450352 57450454 -37822197 + (TC)n Simple_repeat Simple_repeat 1 103 0 1 1023 254 247 39 0 chr17 57450454 57450519 -37822132 - L1MB7 LINE L1 -241 5943 5876 1 1023 372 245 0 0 chr17 57450756 57450862 -37821789 + (TG)n Simple_repeat Simple_repeat 1 106 0 1 1023 765 220 38 0 chr17 57450862 57451021 -37821630 - RSINE1 SINE B4 0 165 1 1 1023 730 301 59 46 chr17 57451602 57451974 -37820677 - L1MA6 LINE L1 -279 6021 5645 1 1023 482 0 17 0 chr17 57452162 57452220 -37820431 + (TTTA)n Simple_repeat Simple_repeat 4 62 0 1 1023 487 286 16 0 chr17 57452220 57452346 -37820305 - RSINE1 SINE B4 -5 160 33 1 1023 728 218 128 5 chr17 57452365 57452568 -37820083 - B4 SINE B4 -64 228 1 1 1023 322 229 146 44 chr17 57452628 57452765 -37819886 - L1_Rod LINE L1 -351 5496 5346 1 1023 366 85 0 0 chr17 57452891 57452950 -37819701 + (GA)n Simple_repeat Simple_repeat 1 59 0 1 1023 530 273 21 21 chr17 57453263 57453405 -37819246 - RSINE1 SINE B4 -7 158 17 1 1023 664 224 13 13 chr17 57453724 57453873 -37818778 - MTEb LTR MaLR -24 355 207 1 1023 1934 162 88 28 chr17 57453880 57454268 -37818383 - MTD LTR MaLR -8 411 1 1 1023 762 242 73 26 chr17 57454268 57454458 -37818193 - MTEb LTR MaLR -175 204 6 1 1023 992 260 28 1 chr17 57454952 57455222 -37817429 + B4A SINE B4 2 290 -2 1 1023 2128 91 63 25 chr17 57455245 57455560 -37817091 - ORR1A2 LTR MaLR 0 327 1 1 1023 576 142 8 24 chr17 57455855 57455978 -37816673 + CT-rich Low_complexity Low_complexity 1 121 0 1 1023 485 253 45 26 chr17 57455981 57456135 -37816516 - RSINE1 SINE B4 -8 157 1 1 1023 202 68 44 22 chr17 57456192 57456237 -37816414 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 1 1023 248 239 75 0 chr17 57456394 57456461 -37816190 + MIRm SINE MIR 80 151 -125 1 1023 225 301 69 88 chr17 57456464 57456624 -37816027 + RSINE1 SINE B4 3 159 -6 1 1023 318 106 0 0 chr17 57456624 57456671 -37815980 + (CCA)n Simple_repeat Simple_repeat 1 47 0 1 1023 386 289 0 0 chr17 57456749 57456839 -37815812 + RSINE1 SINE B4 54 143 -22 1 1023 1894 198 73 64 chr17 57456852 57457369 -37815282 - RLTR11A LTR ERVK -6 522 1 1 1023 186 143 0 0 chr17 57457378 57457413 -37815238 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 1 1023 709 254 158 7 chr17 57457608 57457883 -37814768 - MTEa LTR MaLR -4 375 40 1 1023 653 301 17 11 chr17 57458347 57458525 -37814126 - B3 SINE B2 -11 205 27 1 1023 540 56 0 0 chr17 57458533 57458605 -37814046 + (TCCC)n Simple_repeat Simple_repeat 4 75 0 1 1023 645 221 88 0 chr17 57458608 57458744 -37813907 - B1_Mus1 SINE Alu 0 148 1 1 1023 236 111 22 0 chr17 57458778 57458823 -37813828 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 1023 5720 81 46 8 chr17 57458841 57459625 -37813026 - Lx3B LINE L1 0 6973 6160 1 1023 389 60 0 0 chr17 57459625 57459675 -37812976 - MTEa LTR MaLR -357 50 1 1 1023 6565 128 90 19 chr17 57459675 57460843 -37811808 - MTEa-int LTR MaLR 0 1258 8 1 1023 3747 106 16 2 chr17 57460857 57461369 -37811282 - Lx LINE L1 -43 6611 6093 1 1023 445 127 0 0 chr17 57461369 57461440 -37811211 + Lx LINE L1 6007 6077 -577 1 1023 350 106 0 0 chr17 57461438 57461485 -37811166 - Lx2B LINE L1 -1159 5841 5795 1 1023 938 229 77 9 chr17 57461477 57461710 -37810941 - RMER1B Other Other -27 1039 791 1 1023 301 315 37 0 chr17 57461771 57461879 -37810772 - RMER1A Other Other -744 286 175 1 1023 1550 198 106 14 chr17 57461858 57462206 -37810445 - RMER1B Other Other -645 421 42 1 1023 256 265 0 0 chr17 57462630 57462698 -37809953 - RMER1B Other Other -926 140 73 1 1023 1188 48 0 13 chr17 57462888 57463037 -37809614 - B1_Mus1 SINE Alu 0 148 2 1 1023 475 269 40 43 chr17 57463039 57463203 -37809448 - B3 SINE B2 -1 215 52 1 1023 300 270 87 39 chr17 57463343 57463447 -37809204 + PB1D10 SINE Alu 3 111 -6 1 1023 713 326 78 52 chr17 57463544 57463952 -37808699 - MTD LTR MaLR 0 419 1 1 1023 271 243 56 28 chr17 57464575 57464647 -37808004 + B4 SINE B4 2 75 -217 1 1023 510 17 0 0 chr17 57464714 57464773 -37807878 + (TCCA)n Simple_repeat Simple_repeat 1 59 0 1 1023 482 306 0 0 chr17 57464775 57464886 -37807765 + B4 SINE B4 101 211 -81 1 1023 2087 136 91 13 chr17 57464921 57465294 -37807357 - MTC LTR MaLR 0 421 20 1 1023 247 228 215 0 chr17 57465382 57465461 -37807190 + L2b LINE L2 3279 3374 -1 1 1023 451 270 20 10 chr17 57465902 57466205 -37806446 + (TCCA)n Simple_repeat Simple_repeat 1 306 0 1 1023 273 270 137 33 chr17 57466206 57466359 -37806292 + RLTR21 LTR ERVK 1083 1251 -321 1 1023 734 144 23 6 chr17 57466421 57466596 -37806055 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 1 1023 580 314 107 47 chr17 57466633 57467041 -37805610 - L2a LINE L2 -11 3415 2984 1 1023 622 204 50 104 chr17 57467659 57467861 -37804790 - ZP3AR Satellite Satellite -5 207 17 1 1023 362 154 0 124 chr17 57467846 57467935 -37804716 - PB1 SINE Alu -8 119 42 1 1023 1234 84 6 0 chr17 57468021 57468188 -37804463 - B2_Mm2 SINE B2 -27 168 1 1 1023 663 203 101 69 chr17 57468405 57468622 -37804029 - MTD LTR MaLR 0 419 196 1 1023 1981 234 48 44 chr17 57468641 57469146 -37803505 - Lx5 LINE L1 -8 7042 6536 1 1023 472 289 171 16 chr17 57469147 57469340 -37803311 - MTD LTR MaLR -195 224 2 1 1023 883 261 201 0 chr17 57469381 57469664 -37802987 - MTE2b LTR MaLR -11 368 29 1 1023 269 288 85 39 chr17 57469886 57470016 -37802635 - B4 SINE B4 -43 249 114 1 1023 1015 213 10 0 chr17 57470065 57470262 -37802389 + B3 SINE B2 1 199 -17 1 1023 1199 264 217 22 chr17 57470340 57470963 -37801688 - Lx8 LINE L1 -21 7452 6709 1 1023 790 230 83 5 chr17 57471145 57471350 -37801301 - ID_B1 SINE B4 -1 223 3 1 1023 525 280 108 37 chr17 57471562 57471859 -37800792 - Lx8 LINE L1 -8 7465 7148 1 1023 242 180 40 0 chr17 57471863 57471913 -37800738 - Lx8 LINE L1 -268 7205 7154 1 1023 429 243 308 24 chr17 57472598 57472809 -37799842 + B4A SINE B4 5 275 -17 1 1023 1105 148 84 47 chr17 57472908 57473121 -37799530 + URR1A DNA MER1_type 6 226 0 1 1023 595 309 129 10 chr17 57473316 57473610 -37799041 - MT2A LTR ERVL -8 525 197 1 1023 287 242 0 14 chr17 57473614 57473695 -37798956 - MTE2b LTR MaLR -299 80 1 1 1023 871 255 88 81 chr17 57473899 57474194 -37798457 + MTE2a LTR MaLR 69 365 -14 1 1023 183 104 20 40 chr17 57474589 57474639 -37798012 + T-rich Low_complexity Low_complexity 4 52 0 1 1023 1201 54 0 26 chr17 57474644 57474797 -37797854 - B1_Mur4 SINE Alu -1 149 1 1 1023 238 309 122 28 chr17 57474804 57474823 -37797828 - B3A SINE B2 -1 197 1 1 1023 593 287 43 25 chr17 57474823 57474984 -37797667 - RSINE1 SINE B4 0 165 2 1 1023 22 0 0 0 chr17 57475098 57475120 -37797531 + AT_rich Low_complexity Low_complexity 1 22 0 1 1023 972 216 168 46 chr17 57475350 57475719 -37796932 - Lx8 LINE L1 -70 7403 6990 1 1023 504 275 87 32 chr17 57475730 57475948 -37796703 - B4A SINE B4 -62 230 1 1 1023 379 232 0 57 chr17 57475956 57476061 -37796590 - PB1D10 SINE Alu -18 99 1 1 1023 279 183 0 32 chr17 57476093 57476155 -37796496 + B1_Mus1 SINE Alu 1 60 -88 1 1023 1134 74 0 0 chr17 57476242 57476404 -37796247 + (GA)n Simple_repeat Simple_repeat 2 163 0 1 1023 615 112 51 0 chr17 57476404 57476502 -37796149 + B1_Mus2 SINE Alu 45 147 0 1 1023 264 68 68 0 chr17 57476502 57476561 -37796090 + (CAAAA)n Simple_repeat Simple_repeat 1 63 0 1 1023 243 0 0 0 chr17 57476562 57476589 -37796062 + (CCAA)n Simple_repeat Simple_repeat 1 27 0 1 1023 216 203 0 42 chr17 57476589 57476661 -37795990 + A-rich Low_complexity Low_complexity 2 70 0 1 1023 434 331 37 15 chr17 57476700 57476835 -37795816 + RSINE1 SINE B4 11 148 -17 1 1023 270 0 0 0 chr17 57476838 57476868 -37795783 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 1 1023 216 0 0 0 chr17 57476985 57477009 -37795642 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1023 777 237 25 6 chr17 57477871 57478028 -37794623 - B3 SINE B2 -12 204 45 1 1023 189 246 0 0 chr17 57478160 57478225 -37794426 + CT-rich Low_complexity Low_complexity 2 66 0 1 1023 477 0 0 0 chr17 57478303 57478356 -37794295 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1023 267 216 149 47 chr17 57478357 57478464 -37794187 - Lx8 LINE L1 -38 7435 7318 1 1023 922 305 56 49 chr17 57478567 57479015 -37793636 - Lx8 LINE L1 -197 7276 6826 1 1023 241 196 36 0 chr17 57479228 57479284 -37793367 + CT-rich Low_complexity Low_complexity 3 60 0 1 1023 4561 178 44 23 chr17 57479329 57479499 -37793152 - Lx9 LINE L1 -5 7639 7478 1 1023 288 0 0 0 chr17 57479499 57479531 -37793120 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1023 4561 178 44 23 chr17 57479531 57480241 -37792410 - Lx9 LINE L1 -167 7477 6740 1 1023 263 206 60 52 chr17 57480376 57480456 -37792195 + B4A SINE B4 4 81 -211 1 1023 217 100 20 20 chr17 57480528 57480579 -37792072 + (TAAA)n Simple_repeat Simple_repeat 4 54 0 1 1023 352 215 0 9 chr17 57480579 57480654 -37791997 + B3 SINE B2 81 151 -47 1 1023 534 16 0 0 chr17 57480659 57480722 -37791929 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 1023 764 181 21 0 chr17 57480737 57480881 -37791770 + B1_Mur2 SINE Alu 3 149 0 1 1023 633 254 89 64 chr17 57481433 57481739 -37790912 - MTEb LTR MaLR -8 371 1 1 1023 1037 238 174 3 chr17 57481865 57482164 -37790487 + MTD LTR MaLR 67 416 -3 1 1023 407 343 59 6 chr17 57482313 57482480 -37790171 + MER68 LTR ERVL 275 450 -113 1 1023 327 289 104 9 chr17 57482480 57482595 -37790056 - RMER15 LTR ERVL 0 575 450 1 1023 264 292 75 58 chr17 57482617 57482737 -37789914 - RMER15 LTR ERVL -179 396 275 1 1023 395 229 46 79 chr17 57482736 57482888 -37789763 - RMER15 LTR ERVL -416 159 13 1 1023 354 252 159 49 chr17 57483288 57483451 -37789200 - MTEa LTR MaLR -4 375 195 1 1023 326 80 20 0 chr17 57483452 57483502 -37789149 + (GGGAGA)n Simple_repeat Simple_repeat 5 55 0 1 1023 609 266 19 7 chr17 57483621 57483776 -37788875 - MTEa LTR MaLR -202 177 21 1 1023 1496 244 51 63 chr17 57484088 57484500 -37788151 + MTD LTR MaLR 13 419 0 1 1023 6427 58 31 0 chr17 57484586 57485390 -37787261 + L1Md_F2 LINE L1 4758 5586 -297 1 1023 8274 46 4 0 chr17 57485391 57486382 -37786269 + L1Md_F2 LINE L1 5588 6582 0 1 1023 315 277 71 28 chr17 57486785 57486967 -37785684 + MLT1D LTR MaLR 59 248 -257 1 1023 247 269 78 56 chr17 57486901 57487044 -37785607 - RMER17A LTR ERVK -345 406 258 1 1023 414 0 0 0 chr17 57487044 57487090 -37785561 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 1 1023 247 269 78 56 chr17 57487090 57487178 -37785473 - RMER17A LTR ERVK -494 257 171 1 1023 444 188 62 0 chr17 57487102 57487198 -37785453 - RSINE1 SINE B4 -56 109 8 1 1023 313 252 55 18 chr17 57487644 57487753 -37784898 - B3A SINE B2 -72 126 14 1 1023 371 330 0 43 chr17 57487766 57487883 -37784768 - PB1D10 SINE Alu -5 112 1 1 1023 27 0 0 0 chr17 57488026 57488053 -37784598 + AT_rich Low_complexity Low_complexity 1 27 0 1 1023 246 244 32 32 chr17 57488150 57488243 -37784408 - L1_Rod LINE L1 -60 5787 5695 1 1023 24 32 0 0 chr17 57488510 57488541 -37784110 + AT_rich Low_complexity Low_complexity 1 31 0 1 1023 230 259 0 33 chr17 57488848 57488908 -37783743 + MLT1D LTR MaLR 351 408 0 1 1023 590 364 64 13 chr17 57488908 57489140 -37783511 - MLT1F1 LTR MaLR -298 271 28 1 1023 651 117 0 9 chr17 57489187 57489299 -37783352 - Lx LINE L1 0 6654 6544 1 1023 2269 79 0 3 chr17 57489299 57489592 -37783059 + Lx LINE L1 6126 6417 -237 1 1023 421 308 49 0 chr17 57489619 57489762 -37782889 + B4 SINE B4 12 161 -131 1 1023 234 300 40 10 chr17 57489693 57489794 -37782857 + PB1D9 SINE Alu 7 110 -10 1 1023 810 280 125 10 chr17 57489795 57490098 -37782553 + Lx8 LINE L1 7125 7462 -11 1 1023 630 141 22 110 chr17 57490309 57490445 -37782206 + B1_Mur2 SINE Alu 1 124 -25 1 1023 265 277 0 0 chr17 57490479 57490544 -37782107 + L1MA8 LINE L1 6030 6094 -197 1 1023 300 214 0 0 chr17 57490836 57490892 -37781759 + MTE2b LTR MaLR 27 82 -297 1 1023 247 329 0 34 chr17 57490893 57490981 -37781670 + MT2A LTR ERVL 46 130 -403 1 1023 868 246 177 0 chr17 57490908 57491156 -37781495 + MTE2b LTR MaLR 58 349 -30 1 1023 599 244 29 37 chr17 57491189 57491325 -37781326 - RSINE1 SINE B4 -19 146 12 1 1023 249 317 15 54 chr17 57491622 57491752 -37780899 - MTD LTR MaLR -229 190 66 1 1023 348 273 4 8 chr17 57491898 57492154 -37780497 + (TG)n Simple_repeat Simple_repeat 1 254 0 1 1023 243 303 91 79 chr17 57492155 57492320 -37780331 - B4 SINE B4 -1 291 125 1 1023 679 125 9 9 chr17 57492351 57492456 -37780195 + B1_Mur2 SINE Alu 28 132 -17 1 1023 681 282 18 23 chr17 57492944 57493162 -37779489 + RMER15 LTR ERVL 347 563 -12 1 1023 1650 289 114 35 chr17 57493192 57493869 -37778782 + Lx8 LINE L1 6470 7199 -274 1 1023 762 191 8 8 chr17 57494399 57494531 -37778120 + RLTR14 LTR ERV1 251 382 0 1 1023 334 276 29 0 chr17 57494532 57494637 -37778014 - Lx8 LINE L1 -522 6951 6844 1 1023 2622 103 8 20 chr17 57494936 57495333 -37777318 - Lx2 LINE L1 -4 6993 6602 1 1023 10033 133 43 19 chr17 57495336 57497301 -37775350 - Lx2 LINE L1 -929 6068 4049 1 1023 357 100 43 22 chr17 57497301 57497393 -37775258 + (GTGTG)n Simple_repeat Simple_repeat 3 96 0 1 1023 333 189 0 0 chr17 57497412 57497507 -37775144 + CT-rich Low_complexity Low_complexity 2 96 0 1 1023 351 240 0 6 chr17 57497772 57497953 -37774698 + GA-rich Low_complexity Low_complexity 1 179 0 1 1023 880 307 25 11 chr17 57498591 57498874 -37773777 + B4 SINE B4 2 288 -4 1 1023 281 296 46 52 chr17 57499300 57499568 -37773083 - ORR1D1 LTR MaLR -56 323 5 1 1023 206 204 41 0 chr17 57499586 57499635 -37773016 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 1 1023 427 281 177 24 chr17 57499834 57499998 -37772653 - Lx8 LINE L1 -194 7279 7091 1 1023 460 88 15 0 chr17 57500028 57500096 -37772555 + MTB_Mm LTR MaLR 212 280 -127 1 1023 269 203 15 15 chr17 57500120 57500185 -37772466 + L1MA6 LINE L1 6131 6195 -105 2 1023 582 213 99 7 chr17 57500359 57500501 -37772150 + B3 SINE B2 2 156 -60 3 1023 573 55 0 0 chr17 57500626 57500699 -37771952 + (TC)n Simple_repeat Simple_repeat 1 73 0 4 1023 2866 51 76 0 chr17 57500700 57501054 -37771597 - L1_Mus2 LINE L1 0 6566 6186 5 1023 232 200 20 20 chr17 57501343 57501394 -37771257 + MIR SINE MIR 81 131 -131 6 1023 986 257 112 117 chr17 57501727 57502216 -37770435 - RLTR22_Mur LTR ERVK -252 1596 836 7 1023 534 98 0 0 chr17 57502216 57502298 -37770353 + (CA)n Simple_repeat Simple_repeat 2 83 0 8 1023 986 261 152 66 chr17 57502298 57502496 -37770155 - RLTR22_Mur LTR ERVK -523 1325 1118 7 1023 333 68 0 0 chr17 57502498 57502542 -37770109 + (A)n Simple_repeat Simple_repeat 1 44 0 9 1023 1287 54 0 0 chr17 57502553 57502700 -37769951 + B1_Mus1 SINE Alu 2 148 0 1 1023 237 196 0 0 chr17 57502710 57502756 -37769895 - RLTR22_Mus LTR ERVK -742 1066 1021 1 1023 456 234 19 122 chr17 57502738 57502894 -37769757 - RLTR22_Mus LTR ERVK -979 829 690 1 1023 22 0 0 0 chr17 57502894 57502916 -37769735 + AT_rich Low_complexity Low_complexity 1 22 0 1 1023 7120 106 19 19 chr17 57502916 57503971 -37768680 - Lx LINE L1 0 6654 5600 1 1023 8641 66 2 5 chr17 57503983 57505789 -37766862 - L1Md_F2 LINE L1 0 6582 4786 1 1023 1539 238 70 78 chr17 57505790 57506451 -37766200 - RLTR22_Mur LTR ERVK -1155 693 58 1 1023 386 231 128 9 chr17 57506493 57506602 -37766049 + MTEb LTR MaLR 151 272 -107 1 1023 39 22 0 0 chr17 57506926 57506972 -37765679 + AT_rich Low_complexity Low_complexity 1 46 0 1 1023 344 195 104 0 chr17 57507034 57507111 -37765540 + HAL1-3A_ME LINE L1 1934 2018 -840 1 1023 186 208 0 0 chr17 57507134 57507182 -37765469 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1023 2021 236 17 0 chr17 57507393 57507808 -37764843 - Lx5 LINE L1 -408 6642 6221 2 1023 38780 30 0 1 chr17 57507808 57514161 -37758490 - L1Md_T LINE L1 0 6585 168 2 1023 7679 172 37 72 chr17 57514154 57515108 -37757543 - Lx5 LINE L1 -814 6236 5261 2 1023 189 74 0 0 chr17 57515108 57515135 -37757516 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 2 1023 2688 134 56 9 chr17 57515135 57515563 -37757088 - Lx4A LINE L1 -14 7044 6597 2 1023 7679 161 14 77 chr17 57515563 57516543 -37756108 - Lx5 LINE L1 -617 5260 4348 2 1023 2626 153 65 16 chr17 57516544 57517219 -37755432 - Lx5 LINE L1 -4116 1770 1063 2 1023 35861 66 5 1 chr17 57517185 57523373 -37749278 - L1Md_F2 LINE L1 -2 6580 365 2 1023 2231 186 102 5 chr17 57523361 57523932 -37748719 - Lx5 LINE L1 -5875 1109 522 2 1023 9069 138 16 16 chr17 57523956 57524285 -37748366 - L1_Mur1 LINE L1 -1598 4288 3960 2 1023 494 43 0 14 chr17 57524285 57524355 -37748296 + (TC)n Simple_repeat Simple_repeat 2 70 0 2 1023 1213 89 0 0 chr17 57524356 57524502 -37748149 - B1_Mm SINE Alu -1 146 1 2 1023 9069 138 16 16 chr17 57524502 57525027 -37747624 - L1_Mur1 LINE L1 -1927 3959 3448 2 1023 3369 56 2 5 chr17 57525027 57525424 -37747227 + MTA_Mm LTR MaLR 1 396 0 2 1023 9069 138 16 16 chr17 57525424 57526129 -37746522 - L1_Mur1 LINE L1 -2439 3447 2726 2 1023 8274 46 2 2 chr17 57526191 57527236 -37745415 - L1Md_F2 LINE L1 0 6582 5538 2 1023 1729 284 93 3 chr17 57527787 57528369 -37744282 - Lx8 LINE L1 -370 7103 6470 3 1023 622 296 18 23 chr17 57528399 57528617 -37744034 - RMER15 LTR ERVL -12 563 347 3 1023 297 214 0 0 chr17 57528635 57528691 -37743960 - L1_Mur3 LINE L1 -4045 1835 1780 3 1023 39926 29 1 9 chr17 57528697 57534718 -37737933 - L1Md_T LINE L1 0 6582 622 3 1023 3054 177 17 18 chr17 57534721 57535899 -37736752 - L1VL2 LINE L1 -2132 1483 317 3 1023 212 0 36 0 chr17 57535975 57536003 -37736648 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 3 1023 8476 152 40 86 chr17 57536240 57536903 -37735748 - L1_Mur1 LINE L1 -2595 3291 2651 3 1023 198 0 0 0 chr17 57536903 57536925 -37735726 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 3 1023 8476 152 40 86 chr17 57536925 57538059 -37734592 - L1_Mur1 LINE L1 -3236 2650 1578 3 1023 30 27 0 0 chr17 57538059 57538096 -37734555 + AT_rich Low_complexity Low_complexity 1 37 0 3 1023 8328 42 1 8 chr17 57538149 57539334 -37733317 - L1Md_F2 LINE L1 -1 6581 5405 3 127 5905 94 6 70 chr17 57539334 57540620 -37732031 - L1VL2 LINE L1 -2322 1293 108 4 1024 729 129 0 0 chr17 57540632 57540748 -37731903 + (TTTC)n Simple_repeat Simple_repeat 4 119 0 4 1024 1762 178 42 50 chr17 57540749 57541127 -37731524 - Lx4A LINE L1 0 7058 6684 4 1024 464 0 0 18 chr17 57542324 57542381 -37730270 + (TTTA)n Simple_repeat Simple_repeat 4 59 0 4 1024 2566 202 68 11 chr17 57542381 57542660 -37729991 - Lx5 LINE L1 -22 7028 6744 4 1024 410 0 20 0 chr17 57542660 57542710 -37729941 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1024 2566 202 68 11 chr17 57542710 57542956 -37729695 - Lx5 LINE L1 -307 6743 6474 4 1024 1321 140 0 0 chr17 57542956 57543156 -37729495 - Lx5 LINE L1 -1161 5889 5690 4 1024 1225 219 42 42 chr17 57543156 57543642 -37729009 + RLTR20B1 LTR ERVK 1 563 0 4 1024 1447 163 40 4 chr17 57543642 57543894 -37728757 - Lx5 LINE L1 -189 5688 5428 4 1024 5360 181 31 16 chr17 57543900 57544851 -37727800 - Lx4B LINE L1 -4 7054 6089 4 1024 7864 112 13 16 chr17 57544855 57546224 -37726427 - L1_Mus4 LINE L1 0 6997 5613 4 1024 344 233 0 19 chr17 57546546 57546651 -37726000 + CT-rich Low_complexity Low_complexity 2 104 0 4 1024 340 245 99 21 chr17 57546655 57546752 -37725899 - RSINE1 SINE B4 -5 160 83 5 1024 257 293 175 70 chr17 57546996 57547183 -37725468 - B4 SINE B4 0 292 98 5 1024 1291 224 32 133 chr17 57547221 57547633 -37725018 - ORR1D2 LTR MaLR 0 370 1 5 1024 376 169 0 0 chr17 57547633 57547692 -37724959 - ORR1D2-int LTR MaLR 0 1370 1312 5 1024 7380 114 14 9 chr17 57548075 57549246 -37723405 - Lx LINE L1 -3 6651 5474 5 1024 313 342 96 62 chr17 57549267 57549476 -37723175 - MLT1G1 LTR MaLR -258 337 122 5 1024 405 0 0 0 chr17 57549481 57549526 -37723125 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1024 359 239 32 21 chr17 57549541 57549635 -37723016 + MTD LTR MaLR 6 100 -319 5 1024 1101 263 87 48 chr17 57549637 57549969 -37722682 - MTD LTR MaLR 0 419 75 5 1024 277 276 0 0 chr17 57550040 57550116 -37722535 - B4 SINE B4 -215 77 2 5 1024 507 270 114 7 chr17 57550699 57550848 -37721803 - ID_B1 SINE B4 0 224 60 5 1024 978 170 0 20 chr17 57551022 57551172 -37721479 - B1_Mus1 SINE Alu 0 148 2 5 1024 307 220 176 0 chr17 57551219 57551310 -37721341 + Lx8 LINE L1 7144 7250 -223 6 1024 516 165 97 0 chr17 57551313 57551416 -37721235 - ORR1D2 LTR MaLR 0 370 258 6 1024 247 224 11 49 chr17 57551837 57552020 -37720631 + CT-rich Low_complexity Low_complexity 2 177 0 6 1024 485 275 137 0 chr17 57552252 57552434 -37720217 - L1MA5 LINE L1 -375 5925 5719 6 1024 1225 247 77 15 chr17 57552514 57552839 -37719812 - MTE2b LTR MaLR 0 379 35 6 1024 1334 309 62 10 chr17 57553204 57553724 -37718927 - Lx8 LINE L1 0 7473 6927 6 1024 3742 171 29 18 chr17 57553867 57554550 -37718101 - Lx4B LINE L1 -537 6521 5831 6 1024 1268 143 40 5 chr17 57554544 57554613 -37718038 + L1_Mur2 LINE L1 5372 5446 -431 6 1024 519 56 0 0 chr17 57554613 57554684 -37717967 + (CAAAC)n Simple_repeat Simple_repeat 5 75 0 6 1024 1268 143 40 5 chr17 57554684 57554838 -37717813 + L1_Mur2 LINE L1 5447 5603 -274 6 1024 13361 101 12 23 chr17 57555403 57557865 -37714786 - L1_Mur1 LINE L1 -1786 4100 1656 6 1024 960 274 51 90 chr17 57557903 57558333 -37714318 + MTE2a LTR MaLR 3 405 -14 7 1024 1305 74 0 0 chr17 57558861 57559064 -37713587 + (TTC)n Simple_repeat Simple_repeat 1 203 0 7 1024 1479 61 10 10 chr17 57559078 57559277 -37713374 - L1Md_F2 LINE L1 -4 6578 6380 7 1024 229 254 0 50 chr17 57559359 57559500 -37713151 + GA-rich Low_complexity Low_complexity 1 134 0 7 1024 389 230 6 17 chr17 57559538 57559719 -37712932 + GA-rich Low_complexity Low_complexity 2 180 0 7 1024 183 190 0 23 chr17 57560128 57560171 -37712480 - L2c LINE L2 0 3387 3346 7 1024 7905 164 31 5 chr17 57560296 57562092 -37710559 - Lx5 LINE L1 -1 7049 5194 7 1024 1596 147 27 4 chr17 57562093 57562353 -37710298 + RLTR25A LTR ERVK 69 334 -769 7 1024 1302 48 0 0 chr17 57562353 57562500 -37710151 + B1_Mm SINE Alu 1 147 0 7 1024 249 108 0 0 chr17 57562508 57562545 -37710106 + (TA)n Simple_repeat Simple_repeat 1 37 0 7 1024 216 0 0 0 chr17 57562576 57562600 -37710051 + (TTA)n Simple_repeat Simple_repeat 2 25 0 7 1024 4645 81 19 2 chr17 57562612 57563208 -37709443 - Lx3_Mus LINE L1 -8 7001 6396 8 1024 1889 106 0 7 chr17 57563208 57563484 -37709167 + L1_Mur1 LINE L1 2536 2809 -3077 8 1024 5473 135 14 6 chr17 57563497 57564709 -37707942 + L1Md_F2 LINE L1 277 1519 -4364 8 1024 21968 7 1 1 chr17 57564715 57567855 -37704796 - L1Md_A LINE L1 0 6582 3442 8 1024 41289 19 0 0 chr17 57567830 57574191 -37698460 - L1Md_A LINE L1 0 6582 222 8 1024 7852 98 4 0 chr17 57574188 57575313 -37697338 + L1Md_F2 LINE L1 1504 2632 -3251 8 1024 15042 83 7 1 chr17 57575314 57577401 -37695250 + L1Md_F2 LINE L1 3887 5980 -1001 8 1024 318 347 51 28 chr17 57577680 57577858 -37694793 - ORR1E LTR MaLR -177 182 1 8 1024 180 0 0 0 chr17 57577914 57577934 -37694717 + (A)n Simple_repeat Simple_repeat 1 20 0 8 1024 888 128 6 18 chr17 57577953 57578120 -37694531 + CT-rich Low_complexity Low_complexity 1 165 0 8 1024 728 301 121 27 chr17 57578173 57578429 -37694222 - B4 SINE B4 0 292 13 8 1024 230 348 0 14 chr17 57578367 57578437 -37694214 - ID2 SINE ID -10 73 5 8 1024 408 302 58 37 chr17 57578481 57578670 -37693981 + RLTR42-int LTR ERVK 1141 1333 -4189 8 1024 822 231 55 11 chr17 57579203 57579403 -37693248 - B3A SINE B2 -4 212 9 9 1024 369 0 0 0 chr17 57579410 57579451 -37693200 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 9 1024 3482 261 52 105 chr17 57579452 57580609 -37692042 - Lx5 LINE L1 -20 7030 5935 9 1024 305 235 86 29 chr17 57580860 57581000 -37691651 - L1_Rod LINE L1 -4454 1393 1246 9 1024 791 202 66 174 chr17 57581168 57581455 -37691196 + MTE2a LTR MaLR 1 256 -123 9 1024 186 43 0 0 chr17 57581509 57581532 -37691119 + (TG)n Simple_repeat Simple_repeat 1 23 0 9 1024 464 0 18 0 chr17 57581555 57581611 -37691040 + (TCTA)n Simple_repeat Simple_repeat 1 57 0 9 1024 459 354 19 6 chr17 57581639 57581801 -37690850 - RSINE1 SINE B4 0 165 2 9 1024 226 284 30 0 chr17 57583651 57583718 -37688933 - L1MD1 LINE L1 -65 6177 6109 9 1024 843 237 19 67 chr17 57583840 57584048 -37688603 - B3A SINE B2 0 198 1 9 1024 308 357 35 9 chr17 57584053 57584166 -37688485 - B4 SINE B4 -73 219 104 1 1024 1419 282 103 30 chr17 57584817 57585314 -37687337 - MT2A LTR ERVL 0 533 1 1 1024 222 360 69 20 chr17 57585452 57585554 -37687097 - MIR SINE MIR -151 111 5 1 1024 658 294 119 38 chr17 57586133 57586410 -37686241 + B4 SINE B4 6 288 -4 1 1024 386 310 0 25 chr17 57586678 57586797 -37685854 - LTR33B LTR ERVL -7 496 381 1 1024 320 327 67 49 chr17 57586900 57587064 -37685587 - LTR33B LTR ERVL -314 189 23 1 1024 1208 261 83 21 chr17 57587560 57587920 -37684731 - MTD LTR MaLR 0 379 1 1 1024 210 71 0 0 chr17 57588050 57588078 -37684573 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1024 443 281 178 30 chr17 57588095 57588297 -37684354 - B4A SINE B4 -3 289 58 1 1024 343 132 29 0 chr17 57588334 57588402 -37684249 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 1024 304 311 232 24 chr17 57588437 57588562 -37684089 - RSINE1 SINE B4 -8 157 7 1 1024 624 274 40 53 chr17 57588555 57588782 -37683869 - B4 SINE B4 -51 241 18 1 1024 254 325 113 31 chr17 57588781 57588940 -37683711 - RMER15 LTR ERVL -68 507 336 1 1024 985 278 83 26 chr17 57589576 57589962 -37682689 - MTD LTR MaLR -21 398 3 1 1024 756 264 142 15 chr17 57590193 57590454 -37682197 - MTE2a LTR MaLR -5 374 81 1 1024 338 167 12 0 chr17 57590601 57590685 -37681966 + CT-rich Low_complexity Low_complexity 2 86 0 1 1024 233 323 0 0 chr17 57590685 57590747 -37681904 - Lx8 LINE L1 -247 7226 7165 1 1024 381 100 33 0 chr17 57591056 57591116 -37681535 - Lx9 LINE L1 -167 7477 7416 1 1024 816 125 0 0 chr17 57591129 57591257 -37681394 + (TTCC)n Simple_repeat Simple_repeat 1 128 0 1 1024 29955 99 29 42 chr17 57591262 57594495 -37678156 - Lx3A LINE L1 -7 6974 3719 1 1024 1949 143 0 26 chr17 57594495 57594803 -37677848 - Lx LINE L1 -2 6652 6353 1 1024 29955 109 34 59 chr17 57594803 57598462 -37674189 - Lx3A LINE L1 -2168 3718 221 1 1024 751 223 0 13 chr17 57598474 57598624 -37674027 - Lx9 LINE L1 -214 7430 7283 1 1024 605 229 16 0 chr17 57598628 57598750 -37673901 + Lx9 LINE L1 6692 6815 -829 1 1024 3234 194 32 38 chr17 57598747 57599410 -37673241 + RMER1B Other Other 408 1066 0 1 1024 1484 198 18 101 chr17 57599412 57599800 -37672851 + Lx9 LINE L1 6798 7153 -491 1 1024 976 261 38 26 chr17 57600439 57600778 -37671873 + RLTR15 LTR ERVK 1 343 -16 1 1024 213 356 0 114 chr17 57600860 57600974 -37671677 + B1_Mur1 SINE Alu 49 149 0 1 1024 1041 282 60 30 chr17 57601120 57601153 -37671498 - MTD LTR MaLR -59 360 331 1 1024 2635 141 52 15 chr17 57601153 57601555 -37671096 + MTC LTR MaLR 5 421 0 1 1024 1041 282 60 30 chr17 57601555 57601854 -37670797 - MTD LTR MaLR -89 330 18 1 1024 343 169 22 11 chr17 57601919 57602009 -37670642 + G-rich Low_complexity Low_complexity 3 93 0 1 1024 1099 57 11 43 chr17 57602009 57602193 -37670458 + (GGGAGA)n Simple_repeat Simple_repeat 1 178 0 1 1024 935 265 102 22 chr17 57602321 57602684 -37669967 + L1M3 LINE L1 4497 4888 -1252 1 1024 242 229 0 0 chr17 57602936 57602984 -37669667 + T-rich Low_complexity Low_complexity 3 50 0 1 1024 4093 46 4 4 chr17 57603024 57603508 -37669143 - L1Md_F2 LINE L1 -1 6581 6098 1 1024 225 349 15 0 chr17 57603712 57603778 -37668873 + Charlie12 DNA MER1_type 7 73 -2800 1 1024 2240 177 74 8 chr17 57604094 57604487 -37668164 - MTC LTR MaLR -2 419 1 1 1024 527 297 102 5 chr17 57604516 57604702 -37667949 - RMER15 LTR ERVL 0 575 372 1 1024 330 283 120 38 chr17 57604813 57604971 -37667680 - RMER15 LTR ERVL -402 173 3 1 1024 188 333 84 21 chr17 57605087 57605182 -37667469 + MIRb SINE MIR 162 262 -6 1 1024 21445 157 29 78 chr17 57605213 57611811 -37660840 + Lx LINE L1 410 6654 0 1 1024 1406 103 14 0 chr17 57611825 57612048 -37660603 + L1_Mus3 LINE L1 6411 6636 -2 1 1024 228 197 45 15 chr17 57612053 57612120 -37660531 + A-rich Low_complexity Low_complexity 2 70 0 1 1024 30 0 0 0 chr17 57612253 57612283 -37660368 + AT_rich Low_complexity Low_complexity 1 30 0 1 1024 747 268 23 32 chr17 57612287 57612507 -37660144 - Lx8 LINE L1 -798 6675 6458 1 1024 387 310 74 74 chr17 57612599 57612815 -37659836 + MER20 DNA MER1_type 1 216 -3 1 1024 226 171 0 0 chr17 57612842 57612883 -37659768 - MTE2a LTR MaLR 0 379 339 1 1024 1137 261 11 0 chr17 57612886 57613158 -37659493 - Lx9 LINE L1 -287 7357 7083 1 1024 1047 139 173 4 chr17 57613156 57613387 -37659264 + Lx9 LINE L1 7363 7632 -12 1 1024 298 172 62 3 chr17 57613399 57613472 -37659179 - MTE2a LTR MaLR -32 347 255 1 1024 6477 85 8 9 chr17 57613472 57614406 -37658245 + L1_Mus1 LINE L1 5635 6567 0 1 1024 617 272 86 121 chr17 57614420 57614700 -37657951 - MTE2a LTR MaLR -109 270 1 1 1024 357 345 114 45 chr17 57614819 57615177 -37657474 - MER89 LTR ERV1 -9 550 168 1 1024 416 278 21 121 chr17 57615452 57615661 -37656990 - B4A SINE B4 -129 163 8 1 1024 235 294 45 45 chr17 57615752 57615851 -37656800 + MIRc SINE MIR 68 166 -96 1 1024 180 198 0 62 chr17 57615968 57616065 -37656586 + (CATATA)n Simple_repeat Simple_repeat 6 96 0 1 1024 252 165 0 60 chr17 57616130 57616214 -37656437 + (CATA)n Simple_repeat Simple_repeat 4 82 0 1 1024 283 339 16 0 chr17 57616238 57616365 -37656286 + (CA)n Simple_repeat Simple_repeat 2 130 0 1 1024 185 178 0 22 chr17 57616382 57616428 -37656223 + (CATATA)n Simple_repeat Simple_repeat 6 50 0 1 1024 1501 6 0 11 chr17 57616786 57616966 -37655685 + (TTC)n Simple_repeat Simple_repeat 3 180 0 1 1024 831 149 6 12 chr17 57616966 57617136 -37655515 + CT-rich Low_complexity Low_complexity 2 170 0 1 1024 28 0 0 0 chr17 57617177 57617205 -37655446 + AT_rich Low_complexity Low_complexity 1 28 0 1 1024 304 285 36 31 chr17 57617226 57617429 -37655222 - L1MB7 LINE L1 -206 5968 5765 1 1024 263 209 54 21 chr17 57617614 57617707 -37654944 + L1MB7 LINE L1 6031 6126 -58 1 1024 1652 276 70 64 chr17 57618653 57619372 -37653279 - RLTR40 LTR ERVK -91 726 4 1 1024 505 327 30 36 chr17 57619377 57619545 -37653106 - B3A SINE B2 -30 168 2 1 1024 485 325 19 26 chr17 57619545 57619685 -37652966 - B4A SINE B4 -61 231 93 1 1024 1035 285 120 20 chr17 57619721 57620212 -37652439 - Lx8 LINE L1 -7 7466 6927 1 1024 362 256 56 44 chr17 57620212 57620302 -37652349 - B4A SINE B4 -193 99 9 1 1024 257 303 0 22 chr17 57620654 57620745 -37651906 - LTR37A LTR ERV1 -44 382 294 1 1024 1538 239 62 0 chr17 57620822 57621136 -37651515 - MTE2b LTR MaLR -1 378 53 1 1024 1588 48 10 0 chr17 57621136 57621343 -37651308 - L1Md_A LINE L1 0 6582 6374 1 1024 1538 239 62 0 chr17 57621343 57621380 -37651271 - MTE2b LTR MaLR -327 52 6 1 1024 422 193 32 32 chr17 57621401 57621524 -37651127 + L1MA4A LINE L1 5810 5932 -371 1 1024 21 0 0 0 chr17 57621765 57621786 -37650865 + AT_rich Low_complexity Low_complexity 1 21 0 1 1024 891 259 57 75 chr17 57621882 57622267 -37650384 - MTE2a LTR MaLR 0 379 2 1 1024 604 263 134 8 chr17 57623124 57623362 -37649289 - Lx8 LINE L1 -331 7142 6875 1 1024 2161 136 78 18 chr17 57623473 57623870 -37648781 - Lx2A1 LINE L1 -5 7003 6583 1 1024 1290 185 9 0 chr17 57623870 57624086 -37648565 - ORR1A2 LTR MaLR -107 220 3 1 1024 815 304 29 21 chr17 57624139 57624381 -37648270 - MTE2b LTR MaLR -52 327 84 1 1024 1788 314 113 16 chr17 57624411 57625137 -37647514 - ORR1A2-int LTR MaLR -2 1578 783 1 1024 421 333 50 9 chr17 57625213 57625434 -37647217 - ORR1A2-int LTR MaLR -998 372 143 1 1024 668 12 12 0 chr17 57625939 57626020 -37646631 + (GA)n Simple_repeat Simple_repeat 1 82 0 1 1024 366 123 0 0 chr17 57626020 57626077 -37646574 + (GGA)n Simple_repeat Simple_repeat 3 59 0 1 1024 5138 85 3 1 chr17 57626302 57626988 -37645663 - L1_Mus3 LINE L1 -7 6631 5945 1 1024 13536 100 2 1 chr17 57626991 57629034 -37643617 + L1Md_F2 LINE L1 3542 5586 -297 1 1024 6789 58 93 3 chr17 57629035 57629936 -37642715 + L1Md_F2 LINE L1 5588 6569 -13 1 1024 5698 84 6 6 chr17 57629949 57630730 -37641921 + L1_Mus2 LINE L1 5786 6566 0 1 1024 7473 117 16 6 chr17 57630767 57632397 -37640254 + Lx3A LINE L1 4667 6311 -670 1 1024 414 232 0 0 chr17 57632497 57632592 -37640059 + L1Md_F LINE L1 235 329 -6190 1 1024 447 261 0 0 chr17 57632588 57632707 -37639944 + L1Md_F LINE L1 209 327 -6192 1 1024 32912 37 5 36 chr17 57632747 57637560 -37635091 + L1Md_F3 LINE L1 928 5586 -297 1 1024 7726 57 5 1 chr17 57637561 57638540 -37634111 + L1Md_F3 LINE L1 5588 6570 -14 1 1024 3654 136 44 0 chr17 57638540 57639157 -37633494 + Lx3A LINE L1 6296 6939 -42 1 1024 28 0 0 0 chr17 57639167 57639195 -37633456 + AT_rich Low_complexity Low_complexity 1 28 0 1 1024 21238 172 37 13 chr17 57639195 57639652 -37632999 + Lx3C LINE L1 1244 1714 -4172 1 1024 4594 162 24 26 chr17 57639652 57640499 -37632152 + Lx3C LINE L1 6124 6968 -8 1 1024 228 67 0 0 chr17 57640507 57640537 -37632114 + (TAA)n Simple_repeat Simple_repeat 3 32 0 1 1024 21238 178 33 11 chr17 57640537 57645573 -37627078 + Lx3C LINE L1 1723 6870 -106 1 1024 2024 226 12 5 chr17 57645951 57646356 -37626295 - RLTR20B2 LTR ERVK 0 560 153 1 1024 6147 70 14 17 chr17 57646356 57647227 -37625424 - RLTR13A3 LTR ERVK 0 978 111 1 1024 619 196 143 14 chr17 57647236 57647376 -37625275 - RLTR20B2 LTR ERVK -402 158 1 1 1024 580 308 36 13 chr17 57647446 57647670 -37624981 - Lx8 LINE L1 -194 7279 7051 1 1024 524 276 194 10 chr17 57649499 57649788 -37622863 + Lx9 LINE L1 6926 7267 -377 1 1024 437 319 86 52 chr17 57650297 57650387 -37622264 + L1M4 LINE L1 3499 3590 -2556 1 1024 2745 62 0 6 chr17 57650387 57650744 -37621907 - L1Md_F2 LINE L1 -8 6574 6220 1 1024 437 319 86 52 chr17 57650744 57650921 -37621730 + L1M4 LINE L1 3588 3775 -2371 1 1024 311 216 179 35 chr17 57651039 57651278 -37621373 + L1M4 LINE L1 4011 4248 -1632 1 1024 586 165 0 0 chr17 57651280 57651371 -37621280 + 4.5SRNA scRNA scRNA 1 91 -3 1 1024 2135 147 91 41 chr17 57651372 57651741 -37620910 + L1VL4 LINE L1 368 730 -5572 1 1024 862 118 76 12 chr17 57651741 57651913 -37620738 + Lx LINE L1 6470 6652 -2 1 1024 2135 147 91 41 chr17 57651913 57651984 -37620667 + L1VL4 LINE L1 731 828 -5474 1 1024 11533 129 34 30 chr17 57651980 57655000 -37617651 + L1VL2 LINE L1 9 2862 -753 1 1024 1338 67 0 0 chr17 57655435 57655613 -37617038 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1 1024 531 112 0 0 chr17 57655613 57655693 -37616958 + (TC)n Simple_repeat Simple_repeat 2 81 0 1 1024 3341 102 29 4 chr17 57655920 57656401 -37616250 - Lx LINE L1 -6 6648 6156 1 1024 1427 211 104 58 chr17 57656456 57657054 -37615597 + RMER12 LTR ERVK 1 653 -669 1 1024 492 62 0 0 chr17 57657080 57657144 -37615507 + (TTCC)n Simple_repeat Simple_repeat 2 65 0 2 1024 1044 231 63 56 chr17 57657144 57657447 -37615204 + RMER12 LTR ERVK 989 1293 -29 1 1024 1765 219 66 29 chr17 57658140 57658595 -37614056 + Lx2B LINE L1 6493 6964 -36 2 1024 2175 112 3 59 chr17 57658600 57658941 -37613710 + ORR1A3 LTR MaLR 1 322 -4 2 1024 360 0 0 0 chr17 57658950 57658990 -37613661 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 2 1024 225 315 83 74 chr17 57659921 57660137 -37612514 + Lx8 LINE L1 7184 7401 -72 2 1024 459 130 0 0 chr17 57660511 57660588 -37612063 + (CA)n Simple_repeat Simple_repeat 2 78 0 2 1024 186 43 0 0 chr17 57660588 57660610 -37612041 + (GA)n Simple_repeat Simple_repeat 2 24 0 2 1024 673 280 58 5 chr17 57662353 57662543 -37610108 - B3 SINE B2 -6 210 11 2 1024 1199 93 50 20 chr17 57662877 57663075 -37609576 + L1Md_F2 LINE L1 6367 6570 -12 2 1024 233 278 19 0 chr17 57663130 57663238 -37609413 + Lx9 LINE L1 7401 7510 -134 2 1024 488 182 11 49 chr17 57663278 57663463 -37609188 + (TA)n Simple_repeat Simple_repeat 2 179 0 2 1024 1344 123 24 39 chr17 57663526 57663780 -37608871 - Lx LINE L1 -25 6629 6380 2 1024 28 48 0 0 chr17 57664782 57664824 -37607827 + AT_rich Low_complexity Low_complexity 1 42 0 2 1024 2687 207 52 46 chr17 57665815 57666997 -37605654 + L1_Mur3 LINE L1 861 1973 -3907 2 1024 4582 130 9 31 chr17 57667025 57667890 -37604761 - L1_Mur2 LINE L1 -3395 2482 1637 2 1024 417 141 14 0 chr17 57667892 57667963 -37604688 + Lx4A LINE L1 6604 6675 -383 2 1024 833 82 103 0 chr17 57668058 57668204 -37604447 - L1_Mur2 LINE L1 -3835 2042 1882 2 1024 2026 186 38 8 chr17 57668538 57669467 -37603184 + L1VL4 LINE L1 744 1676 -4210 2 1024 6682 122 60 19 chr17 57669468 57671134 -37601517 + L1VL2 LINE L1 263 1935 -1680 2 15 5823 166 24 97 chr17 57671120 57672689 -37599962 + L1_Mur1 LINE L1 2645 4098 -1788 2 1025 538 294 52 79 chr17 57672690 57672889 -37599762 - RLTR16 LTR ERVK -259 246 48 2 1025 8101 41 0 4 chr17 57672889 57673871 -37598780 + L1Md_F2 LINE L1 5605 6582 0 2 1025 1289 85 0 11 chr17 57673871 57674061 -37598590 + L1Md_F2 LINE L1 6382 6569 -13 2 1025 538 294 52 79 chr17 57674061 57674089 -37598562 - RLTR16 LTR ERVK -458 47 25 2 1025 3050 193 102 13 chr17 57674100 57675034 -37597617 - MYSERV16_I-int LTR ERVK -2 2324 1308 2 1025 902 170 35 5 chr17 57675034 57675235 -37597416 + Lx3C LINE L1 1898 2104 -3782 2 1025 8273 163 9 14 chr17 57675235 57677371 -37595280 + Lx3C LINE L1 4259 6391 -585 2 1025 2592 142 0 47 chr17 57677368 57677884 -37594767 - L1_Mur2 LINE L1 -1495 4382 3891 2 1025 432 0 0 0 chr17 57678340 57678388 -37594263 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 1025 208 204 23 0 chr17 57678783 57678827 -37593824 + (TAA)n Simple_repeat Simple_repeat 2 46 0 2 1025 188 86 0 28 chr17 57679864 57679900 -37592751 + (TAA)n Simple_repeat Simple_repeat 2 36 0 2 1025 299 138 0 33 chr17 57680538 57680598 -37592053 + C-rich Low_complexity Low_complexity 5 62 0 2 1025 2669 224 66 7 chr17 57680998 57681555 -37591096 + RMER13B LTR ERVK 319 908 0 2 1025 1476 205 33 3 chr17 57681556 57681889 -37590762 + Lx4B LINE L1 5871 6213 -845 2 1025 26 0 0 0 chr17 57683019 57683045 -37589606 + AT_rich Low_complexity Low_complexity 1 26 0 2 1025 372 98 0 103 chr17 57683356 57683424 -37589227 + Lx4A LINE L1 6492 6552 -506 2 1025 407 345 106 39 chr17 57683588 57684038 -37588613 + MER31A LTR ERV1 12 485 0 2 1025 2924 40 11 0 chr17 57685690 57686044 -37586607 + L1Md_F2 LINE L1 6223 6580 -2 2 1025 236 216 39 19 chr17 57686658 57686710 -37585941 - PB1 SINE Alu -69 58 6 2 1025 195 114 0 0 chr17 57687224 57687259 -37585392 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1025 780 333 3 7 chr17 57687286 57687588 -37585063 - Lx9 LINE L1 -766 6878 6578 2 1025 231 231 12 37 chr17 57687594 57687675 -37584976 + Lx9 LINE L1 5068 5146 -701 2 1025 1393 263 169 18 chr17 57687685 57688603 -37584048 + Lx9 LINE L1 5444 6568 -1076 2 1025 328 111 63 0 chr17 57688658 57688721 -37583930 - Lx7 LINE L1 0 7696 7630 2 1025 5571 260 59 24 chr17 57688730 57690573 -37582078 + Lx7 LINE L1 5789 7696 0 2 1025 201 170 57 0 chr17 57690574 57690627 -37582024 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 2 1025 975 252 60 28 chr17 57690631 57690949 -37581702 - Lx7 LINE L1 -347 7349 7022 2 1025 6861 168 26 22 chr17 57690948 57692026 -37580625 + MusHAL1 LINE L1 901 1997 -715 2 1025 1298 40 39 6 chr17 57692026 57692204 -37580447 + L1Md_F3 LINE L1 6401 6584 0 2 1025 6861 168 26 22 chr17 57692204 57692491 -37580160 + MusHAL1 LINE L1 1998 2279 -433 2 1025 243 0 0 0 chr17 57692491 57692518 -37580133 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2 1025 6861 168 26 22 chr17 57692518 57692675 -37579976 + MusHAL1 LINE L1 2280 2431 -281 2 1025 8360 64 7 1 chr17 57692715 57693848 -37578803 + L1_Mm LINE L1 4447 5586 -297 2 1025 7354 69 11 14 chr17 57693848 57694845 -37577806 + L1Md_F2 LINE L1 5587 6580 -2 2 1025 780 318 54 37 chr17 57695097 57695447 -37577204 + MTE2a LTR MaLR 17 372 -7 2 1025 4747 135 42 8 chr17 57695480 57696243 -37576408 + Lx3C LINE L1 6186 6974 -2 2 1025 1937 116 9 53 chr17 57698252 57698589 -37574062 + RLTRETN_Mm LTR ERVK 1 322 0 2 1025 21 0 0 0 chr17 57699587 57699608 -37573043 + AT_rich Low_complexity Low_complexity 1 21 0 2 1025 207 0 0 0 chr17 57699639 57699662 -37572989 + (TA)n Simple_repeat Simple_repeat 1 23 0 2 1025 655 245 95 45 chr17 57699687 57699909 -37572742 - B4A SINE B4 -18 274 42 2 1025 504 0 0 0 chr17 57700318 57700374 -37572277 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 2 1025 225 158 69 17 chr17 57700389 57700447 -37572204 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 2 1025 357 186 30 20 chr17 57700448 57700547 -37572104 - Lx9 LINE L1 -135 7509 7410 2 1025 3801 95 7 5 chr17 57700595 57701158 -37571493 + Lx LINE L1 5853 6416 -238 2 1025 261 216 0 0 chr17 57701637 57701688 -37570963 + L1VL2 LINE L1 442 492 -5843 2 1025 1064 128 0 11 chr17 57701816 57701828 -37570823 - L1_Mus4 LINE L1 -638 5998 5988 2 1025 2623 128 2 12 chr17 57701828 57702247 -37570404 - L1_Mus3 LINE L1 -2 6636 6222 2 1025 1064 128 0 11 chr17 57702247 57702408 -37570243 - L1_Mus4 LINE L1 -649 5987 5827 2 1025 4553 77 2 31 chr17 57702445 57703079 -37569572 - L1_Mus2 LINE L1 -3 6563 5949 2 1025 30935 55 12 20 chr17 57703093 57704901 -37567750 - L1Md_F3 LINE L1 0 6584 4873 2 1025 2360 59 0 16 chr17 57704901 57705213 -37567438 - L1Md_F2 LINE L1 -1 6581 6275 2 1025 30935 76 11 46 chr17 57705213 57705648 -37567003 - L1Md_F3 LINE L1 -1011 4872 4444 2 1025 4823 141 76 27 chr17 57705648 57706580 -37566071 - RLTR13A3 LTR ERVK 0 978 1 2 1025 30935 84 9 36 chr17 57706580 57710821 -37561830 - L1Md_F3 LINE L1 -1440 4443 301 2 1025 1531 135 125 0 chr17 57711126 57711422 -37561229 - Lx4B LINE L1 -454 6604 6272 2 1025 1838 159 54 88 chr17 57711422 57711829 -37560822 + RLTR9C LTR ERVK 1 393 0 2 1025 269 245 19 47 chr17 57711830 57711937 -37560714 + MMETn-int LTR ERVK 1 104 -4740 2 1025 2581 182 31 114 chr17 57711972 57712786 -37559865 + MMETn-int LTR ERVK 108 853 -3991 2 1025 829 154 7 0 chr17 57712788 57712931 -37559720 + MMETn-int LTR ERVK 1942 2085 -5321 2 1025 2492 174 26 10 chr17 57712956 57713450 -37559201 + MMETn-int LTR ERVK 2496 2997 -4409 2 1025 910 126 0 67 chr17 57713450 57713629 -37559022 + RLTR13D1 LTR ERVK 486 652 -154 2 1025 3986 179 22 37 chr17 57714043 57716074 -37556577 + MMETn-int LTR ERVK 2356 4085 -3321 2 1025 451 120 0 0 chr17 57716285 57716360 -37556291 + MMETn-int LTR ERVK 7331 7405 -1 2 1025 1769 177 37 64 chr17 57716360 57716764 -37555887 + RLTR9C LTR ERVK 1 393 0 2 1025 675 266 0 0 chr17 57716768 57716926 -37555725 - Lx4B LINE L1 -785 6273 6116 2 1025 1693 151 34 9 chr17 57716924 57717252 -37555399 - Lx4B LINE L1 -1134 5924 5589 2 1025 1309 171 311 9 chr17 57717360 57717798 -37554853 - L1_Mur2 LINE L1 -2533 3344 2775 2 1025 261 83 0 0 chr17 57717864 57717900 -37554751 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1025 847 293 24 36 chr17 57719281 57719691 -37552960 + L1MA4A LINE L1 5514 5918 -385 2 1025 31 26 0 0 chr17 57719812 57719850 -37552801 + AT_rich Low_complexity Low_complexity 1 38 0 2 1025 320 313 0 115 chr17 57719975 57720123 -37552528 - B1F SINE Alu -9 140 10 2 1025 442 359 15 0 chr17 57720358 57720489 -37552162 + ID_B1 SINE B4 81 213 -11 2 1025 484 270 13 7 chr17 57720705 57720854 -37551797 + RodERV21-int LTR ERV1 795 944 -4047 2 1025 392 311 35 47 chr17 57720911 57721255 -37551396 + MER52-int LTR ERV1 3639 3978 -3113 2 1025 1367 101 0 0 chr17 57721324 57721512 -37551139 + BGLII_Mus LTR ERVK 1 188 -234 2 1025 6967 122 72 37 chr17 57721515 57723068 -37549583 - L1_Mus3 LINE L1 0 6638 5031 2 1025 881 42 8 0 chr17 57723068 57723186 -37549465 + (GA)n Simple_repeat Simple_repeat 2 120 0 2 1025 3323 218 144 86 chr17 57723186 57724181 -37548470 - L1_Mus3 LINE L1 -853 5030 3985 2 1025 1839 115 28 28 chr17 57724181 57724503 -37548148 + RLTRETN_Mm LTR ERVK 1 322 0 2 1025 3658 29 0 7 chr17 57724503 57724959 -37547692 + MMETn-int LTR ERVK 1 453 -2861 2 1025 12559 42 5 8 chr17 57724956 57726611 -37546040 + MMETn-int LTR ERVK 593 2242 -2602 2 1025 11859 60 2 25 chr17 57726601 57728257 -37544394 + MMETn-int LTR ERVK 3228 4844 0 2 1025 1804 137 22 19 chr17 57728257 57728578 -37544073 + RLTRETN_Mm LTR ERVK 1 322 0 2 1025 599 120 10 0 chr17 57728578 57728678 -37543973 - L1_Mur1 LINE L1 -1893 3993 3893 2 1025 6262 145 58 39 chr17 57728673 57729288 -37543363 + Lx3C LINE L1 4559 5237 -649 2 1025 264 30 0 0 chr17 57729288 57729321 -37543330 + (TA)n Simple_repeat Simple_repeat 1 33 0 2 1025 6262 145 58 39 chr17 57729321 57729502 -37543149 + Lx3C LINE L1 5238 5395 -491 2 1025 447 52 0 0 chr17 57729502 57729560 -37543091 + (CAAAA)n Simple_repeat Simple_repeat 1 58 0 2 1025 7276 154 40 21 chr17 57729560 57731132 -37541519 + Lx3C LINE L1 5396 6969 -7 2 1025 423 0 0 0 chr17 57731607 57731654 -37540997 + (TCCA)n Simple_repeat Simple_repeat 3 49 0 2 1025 1121 68 7 20 chr17 57732299 57732448 -37540203 - B1_Mm SINE Alu 0 147 1 2 1025 291 290 64 18 chr17 57732454 57732563 -37540088 - BGLII_B LTR ERVK -12 429 316 2 1025 3385 68 52 11 chr17 57733685 57734143 -37538508 - L1_Mus1 LINE L1 -1 6566 6090 2 1025 3476 70 7 6 chr17 57734146 57734756 -37537895 + L1_Mus1 LINE L1 5468 6078 -488 2 1025 1537 209 6 36 chr17 57734806 57735139 -37537512 - ORR1A3 LTR MaLR -3 323 1 2 1025 277 275 59 108 chr17 57736113 57736215 -37536436 + B4A SINE B4 195 291 -1 2 1025 23 0 0 0 chr17 57736427 57736450 -37536201 + AT_rich Low_complexity Low_complexity 1 23 0 2 1025 6025 76 19 12 chr17 57736451 57737370 -37535281 - MusHAL1 LINE L1 -281 2431 1507 2 1025 3860 93 6 18 chr17 57737371 57737917 -37534734 + L1_Mus4 LINE L1 6093 6631 -5 2 1025 383 29 28 42 chr17 57737929 57738000 -37534651 + (CAAAA)n Simple_repeat Simple_repeat 2 71 0 2 1025 357 356 13 7 chr17 57738012 57738162 -37534489 + RSINE1 SINE B4 5 155 -10 2 1025 1158 221 30 15 chr17 57738168 57738434 -37534217 - RMER13A LTR ERVK -26 834 565 2 1025 3436 164 5 22 chr17 57739184 57739771 -37532880 - RMER13A LTR ERVK -283 577 1 2 1025 22 35 0 0 chr17 57739958 57739987 -37532664 + AT_rich Low_complexity Low_complexity 1 29 0 2 1025 625 24 24 0 chr17 57740869 57740952 -37531699 + (TC)n Simple_repeat Simple_repeat 2 86 0 2 1025 355 283 0 52 chr17 57741050 57741147 -37531504 - PB1D10 SINE Alu -9 108 17 2 1025 673 310 53 0 chr17 57741060 57741231 -37531420 - ID_B1 SINE B4 -39 185 6 2 1025 511 300 132 57 chr17 57742168 57742433 -37530218 + B4A SINE B4 6 290 -2 3 1025 270 143 0 0 chr17 57742480 57742529 -37530122 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1025 23 0 0 0 chr17 57742709 57742732 -37529919 + AT_rich Low_complexity Low_complexity 1 23 0 3 1025 4694 179 65 12 chr17 57742757 57743673 -37528978 - Lx4A LINE L1 0 7058 6094 3 1025 516 269 43 9 chr17 57743824 57743940 -37528711 + RSINE1 SINE B4 5 124 -41 3 1025 504 0 0 0 chr17 57743940 57743996 -37528655 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 1025 348 183 56 0 chr17 57744345 57744416 -37528235 + MTE2a LTR MaLR 305 379 0 3 1025 750 23 60 8 chr17 57744937 57745071 -37527580 + (CAAAA)n Simple_repeat Simple_repeat 1 141 0 3 1025 4527 164 14 4 chr17 57745077 57745918 -37526733 - L1_Mm LINE L1 -680 5203 4354 3 1025 385 212 18 0 chr17 57745997 57746110 -37526541 + (TAGA)n Simple_repeat Simple_repeat 4 118 0 3 1025 183 64 0 113 chr17 57746402 57746455 -37526196 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 3 1025 215 175 18 0 chr17 57746466 57746523 -37526128 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 1025 333 396 61 51 chr17 57746556 57746753 -37525898 - B4 SINE B4 -8 284 86 3 1025 228 292 53 53 chr17 57746968 57747044 -37525607 - B4 SINE B4 -212 80 5 3 1025 419 141 0 11 chr17 57747100 57747193 -37525458 + (TA)n Simple_repeat Simple_repeat 1 92 0 3 1025 957 336 32 12 chr17 57747983 57748323 -37524328 + ORR1E LTR MaLR 9 355 -4 3 1025 233 345 78 0 chr17 57748615 57748731 -37523920 + LTR85c LTR Gypsy? 476 600 -223 3 1025 453 172 108 8 chr17 57749373 57749502 -37523149 - Lx4A LINE L1 -3 7055 6914 3 1025 4658 125 34 24 chr17 57749502 57750438 -37522213 + RLTR13D6 LTR ERVK 1 983 0 3 1025 4443 183 71 32 chr17 57750442 57751457 -37521194 - Lx4A LINE L1 -143 6915 5862 3 1025 410 169 135 0 chr17 57751459 57751548 -37521103 - Lx4A LINE L1 -2925 2952 2852 3 1025 1641 144 19 6 chr17 57751557 57751698 -37520953 - Lx4A LINE L1 -3281 2596 2457 3 1025 201 74 0 0 chr17 57751698 57751725 -37520926 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 3 1025 1641 144 19 6 chr17 57751725 57751905 -37520746 - Lx4A LINE L1 -3421 2456 2272 3 1025 7748 148 87 3 chr17 57751881 57753491 -37519160 - Lx4A LINE L1 -1096 5962 4208 3 1025 8012 28 1 1 chr17 57753486 57754780 -37517871 - L1Md_A LINE L1 -1 6581 5288 3 1025 8994 12 0 0 chr17 57754776 57756562 -37516089 - L1Md_T LINE L1 0 6582 4797 3 1025 1759 178 33 0 chr17 57756551 57756917 -37515734 - Lx4A LINE L1 -1669 4208 3831 3 1025 1971 163 18 148 chr17 57756890 57757181 -37515470 - Lx4A LINE L1 -2802 3075 2846 3 1025 4017 75 0 4 chr17 57757181 57757700 -37514951 - L1Md_F2 LINE L1 -16 6566 6050 3 1025 1971 163 18 148 chr17 57757700 57758018 -37514633 - Lx4A LINE L1 -3032 2845 2545 3 1025 432 0 0 0 chr17 57758018 57758066 -37514585 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 1025 953 302 32 6 chr17 57758068 57758381 -37514270 + Lx6 LINE L1 6897 7217 -243 3 1025 396 40 0 0 chr17 57758520 57758570 -37514081 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1025 465 19 0 0 chr17 57758570 57758623 -37514028 + (GA)n Simple_repeat Simple_repeat 1 54 0 3 1025 461 214 36 0 chr17 57758626 57758710 -37513941 - RSINE1 SINE B4 -36 129 43 3 1025 21 0 0 0 chr17 57758733 57758754 -37513897 + AT_rich Low_complexity Low_complexity 1 21 0 3 1025 237 83 0 0 chr17 57760269 57760305 -37512346 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1025 453 90 0 0 chr17 57760334 57760401 -37512250 + (TA)n Simple_repeat Simple_repeat 2 68 0 3 1025 448 378 39 51 chr17 57760410 57760664 -37511987 - B4A SINE B4 -31 261 11 3 1025 461 315 32 49 chr17 57760762 57761009 -37511642 + Lx8 LINE L1 7226 7468 -5 3 1025 16252 28 0 0 chr17 57761726 57764410 -37508241 - L1Md_T LINE L1 0 6582 3900 3 1025 325 313 0 0 chr17 57764677 57764760 -37507891 + B3A SINE B2 9 91 -107 3 1025 213 341 114 36 chr17 57764678 57764818 -37507833 + RSINE1 SINE B4 11 161 -4 3 1025 501 17 0 0 chr17 57764822 57764880 -37507771 + (GA)n Simple_repeat Simple_repeat 1 58 0 3 1025 4320 76 15 10 chr17 57764885 57765483 -37507168 - L1_Mus3 LINE L1 0 6638 6038 3 1025 1792 191 40 38 chr17 57765689 57766202 -37506449 + RLTR31A_Mm LTR ERVK 1 561 0 3 1025 249 202 11 53 chr17 57766672 57766766 -37505885 + (CA)n Simple_repeat Simple_repeat 1 90 0 3 1025 409 303 69 38 chr17 57767051 57767312 -37505339 + MER44A DNA MER2_type 2 270 -69 3 1025 879 316 62 3 chr17 57767313 57767621 -37505030 - MTE2b LTR MaLR 0 379 54 3 1025 363 23 0 0 chr17 57767899 57767943 -37504708 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1025 321 89 0 0 chr17 57768988 57769033 -37503618 + (TTA)n Simple_repeat Simple_repeat 1 45 0 3 1025 2941 91 21 0 chr17 57769033 57769452 -37503199 - L1_Mus3 LINE L1 -16 6622 6195 3 1025 4724 130 4 40 chr17 57770001 57770778 -37501873 - Lx3C LINE L1 -7 6969 6221 3 1025 22 56 0 0 chr17 57770784 57770820 -37501831 + AT_rich Low_complexity Low_complexity 1 36 0 3 1025 249 264 11 33 chr17 57771883 57771973 -37500678 - Lx8 LINE L1 -1 7472 7385 3 1025 3180 80 7 7 chr17 57772119 57772550 -37500101 + L1Md_F2 LINE L1 6146 6576 -6 3 1025 189 358 24 24 chr17 57773456 57773539 -37499112 - MER5A DNA MER1_type -105 84 2 3 1025 405 70 0 0 chr17 57773578 57773635 -37499016 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 1025 734 333 21 4 chr17 57773654 57773934 -37498717 - B4A SINE B4 -7 285 1 3 1025 7745 160 28 11 chr17 57774951 57777353 -37495298 + Lx2 LINE L1 4543 6997 0 3 1025 255 289 85 73 chr17 57777577 57777741 -37494910 + Lx8 LINE L1 6899 7064 -409 3 1025 207 69 0 0 chr17 57777757 57777786 -37494865 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1025 525 336 63 104 chr17 57778976 57779391 -37493260 + MTD LTR MaLR 10 407 -12 3 1025 216 347 66 13 chr17 57779784 57779860 -37492791 - RSINE1 SINE B4 0 165 86 3 1025 2537 105 34 29 chr17 57780012 57780425 -37492226 + RLTR9F LTR ERVK 1 415 0 3 1025 686 227 68 80 chr17 57780427 57780752 -37491899 + ETnERV2-int LTR ERVK 3 323 -2991 3 1025 315 19 73 18 chr17 57780752 57780807 -37491844 + (TAAAA)n Simple_repeat Simple_repeat 2 59 0 3 1025 5648 94 74 15 chr17 57780807 57781765 -37490886 + ETnERV2-int LTR ERVK 1071 2085 -5321 3 1025 4628 137 39 30 chr17 57781790 57783322 -37489329 + ETnERV2-int LTR ERVK 2496 4633 -2611 3 1025 6517 56 32 4 chr17 57783322 57784153 -37488498 - RLTR13A LTR ERVK 0 855 1 3 1025 5634 151 15 61 chr17 57784153 57785406 -37487245 + ETnERV2-int LTR ERVK 4634 6422 -984 3 1025 434 55 39 64 chr17 57785624 57785702 -37486949 + ETnERV2-int LTR ERVK 7331 7406 0 3 1025 622 73 0 0 chr17 57785702 57785784 -37486867 + RLTR9F LTR ERVK 1 82 -333 3 1025 703 107 165 51 chr17 57785779 57785937 -37486714 + RLTR9F LTR ERVK 196 371 -44 3 1025 24 53 0 0 chr17 57786307 57786345 -37486306 + AT_rich Low_complexity Low_complexity 1 38 0 3 1025 34 65 0 0 chr17 57786833 57786895 -37485756 + AT_rich Low_complexity Low_complexity 1 62 0 3 1025 303 71 0 0 chr17 57786950 57786992 -37485659 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1025 1001 241 137 24 chr17 57787022 57787539 -37485112 - L1_Rod LINE L1 -340 5546 4939 3 1025 1116 138 154 4 chr17 57787684 57787924 -37484727 + Lx LINE L1 6374 6649 -5 3 1025 4283 78 9 0 chr17 57788431 57788996 -37483655 - L1_Mus1 LINE L1 0 6567 5998 3 1025 4542 79 5 5 chr17 57788998 57789619 -37483032 - L1Md_F2 LINE L1 -12 6570 5950 3 1025 542 301 12 18 chr17 57789635 57789804 -37482847 - RMER15 LTR ERVL -105 470 303 3 1025 392 256 17 17 chr17 57789858 57789977 -37482674 - RMER15 LTR ERVL -456 119 1 3 1025 476 230 0 10 chr17 57790031 57790132 -37482519 - RMER12B LTR ERVK -1064 340 241 3 1025 306 254 0 14 chr17 57790101 57790173 -37482478 - RMER12B LTR ERVK -1333 71 1 3 1025 493 250 23 12 chr17 57790407 57790953 -37481698 - MMSAT4 Satellite Satellite -4 552 1 3 1025 36157 31 2 0 chr17 57791588 57798722 -37473929 - L1Md_T LINE L1 0 6585 1 3 1025 31229 72 19 2 chr17 57798722 57800467 -37472184 - L1Md_F2 LINE L1 -620 5962 4206 3 1025 558 0 0 0 chr17 57800467 57800529 -37472122 + (TA)n Simple_repeat Simple_repeat 2 63 0 3 128 31229 114 31 19 chr17 57800529 57804427 -37468224 - L1Md_F2 LINE L1 -1678 4205 242 3 1026 1156 104 2 1 chr17 57804429 57804612 -37468039 - L1_Mus1 LINE L1 -556 6011 5825 3 1026 1509 210 77 32 chr17 57804682 57805021 -37467630 + ORR1B1 LTR MaLR 41 394 0 3 1026 478 377 67 40 chr17 57805463 57805687 -37466964 - B4A SINE B4 -61 231 2 3 1026 305 319 0 32 chr17 57805819 57805913 -37466738 - HAL1b LINE L1 -452 1557 1467 3 1026 21 36 0 0 chr17 57805994 57806022 -37466629 + AT_rich Low_complexity Low_complexity 1 28 0 3 1026 290 358 7 113 chr17 57806220 57806371 -37466280 + RSINE1 SINE B4 2 136 -29 3 1026 243 0 0 0 chr17 57806374 57806401 -37466250 + (TC)n Simple_repeat Simple_repeat 1 27 0 3 1026 681 13 0 0 chr17 57806401 57806478 -37466173 + (CA)n Simple_repeat Simple_repeat 1 78 0 3 1026 389 20 20 0 chr17 57806478 57806527 -37466124 + (GA)n Simple_repeat Simple_repeat 2 52 0 3 1026 527 354 0 7 chr17 57806872 57807020 -37465631 + RSINE1 SINE B4 1 147 -18 3 1026 393 22 0 0 chr17 57807020 57807066 -37465585 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1026 234 0 0 0 chr17 57807066 57807091 -37465560 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 1026 464 48 16 0 chr17 57807184 57807247 -37465404 + (GAAA)n Simple_repeat Simple_repeat 4 67 0 3 1026 758 329 25 7 chr17 57807587 57807872 -37464779 + B4A SINE B4 3 292 0 3 1026 215 206 31 16 chr17 57807876 57807940 -37464711 + (CATATA)n Simple_repeat Simple_repeat 1 65 0 3 1026 507 212 10 0 chr17 57807993 57808092 -37464559 - MTC LTR MaLR -321 100 1 3 1026 953 123 14 0 chr17 57808316 57808454 -37464197 + B1_Mus1 SINE Alu 2 141 -7 3 1026 293 0 0 26 chr17 57808457 57808495 -37464156 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 3 1026 26 0 0 0 chr17 57808739 57808765 -37463886 + AT_rich Low_complexity Low_complexity 1 26 0 3 1026 291 237 65 13 chr17 57808830 57808907 -37463744 - MTE2a LTR MaLR -11 368 288 3 1026 567 0 0 0 chr17 57812256 57812319 -37460332 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1026 277 300 47 67 chr17 57814510 57814660 -37457991 - LTR41B LTR ERVL -609 149 3 3 1026 1191 245 127 33 chr17 57814966 57815447 -37457204 - RLTR11A LTR ERVK 0 528 3 3 1026 1242 174 63 0 chr17 57815450 57815737 -37456914 - MYSERV16_I-int LTR ERVK -1 2325 2021 3 1026 435 19 0 0 chr17 57815795 57815847 -37456804 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 1026 306 0 0 0 chr17 57815850 57815884 -37456767 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1026 401 54 18 0 chr17 57815894 57815950 -37456701 + (TAAA)n Simple_repeat Simple_repeat 4 60 0 3 1026 789 65 0 0 chr17 57816049 57816157 -37456494 + L1_Mus2 LINE L1 6459 6566 0 4 1026 1140 260 87 36 chr17 57816701 57817339 -37455312 + RMER13B LTR ERVK 1 904 -4 4 1026 435 329 49 31 chr17 57817371 57817534 -37455117 - B4A SINE B4 -123 169 4 4 1026 536 273 92 10 chr17 57818120 57818316 -37454335 + B3 SINE B2 1 212 -4 4 1026 235 241 19 0 chr17 57818497 57818551 -37454100 + (CATA)n Simple_repeat Simple_repeat 4 58 0 4 1026 645 208 17 0 chr17 57818552 57818725 -37453926 + (TA)n Simple_repeat Simple_repeat 2 177 0 4 1026 842 168 27 7 chr17 57818757 57818907 -37453744 - RLTR28B LTR ERVL -61 420 268 4 1026 1710 178 3 63 chr17 57818909 57819257 -37453394 - ORR1A3 LTR MaLR 0 327 1 4 1026 8878 186 54 35 chr17 57819263 57821184 -37451467 - ORR1A3-int LTR MaLR -6 1957 1 4 1026 1725 169 0 87 chr17 57821184 57821516 -37451135 - ORR1A3 LTR MaLR 0 326 25 4 1026 2777 21 61 3 chr17 57821516 57821843 -37450808 - ORR1A0 LTR MaLR 0 346 1 4 1026 1725 169 0 87 chr17 57821843 57821867 -37450784 - ORR1A3 LTR MaLR -302 24 1 4 1026 842 248 161 0 chr17 57821867 57822097 -37450554 - RLTR28B LTR ERVL -211 270 4 4 1026 712 338 65 25 chr17 57822099 57822378 -37450273 + ORR1E LTR MaLR 66 355 -4 4 1026 1441 211 2 129 chr17 57822400 57822463 -37450188 - ORR1B2 LTR MaLR -2 365 328 4 1026 1029 134 48 11 chr17 57822463 57822651 -37450000 - B2_Mm2 SINE B2 0 195 1 4 1026 1441 211 2 129 chr17 57822651 57823005 -37449646 - ORR1B2 LTR MaLR -40 327 1 4 1026 22 35 0 0 chr17 57823342 57823371 -37449280 + AT_rich Low_complexity Low_complexity 1 29 0 4 1026 29 28 0 0 chr17 57823395 57823431 -37449220 + AT_rich Low_complexity Low_complexity 1 36 0 4 1026 1544 161 8 0 chr17 57823814 57824062 -37448589 + RLTR20D LTR ERVK 1 250 -318 4 1026 5783 87 7 4 chr17 57824062 57825338 -37447313 - L1_Mus1 LINE L1 -307 6260 4979 4 1026 5492 167 16 6 chr17 57825338 57826345 -37446306 + MERVK26-int LTR ERVK 2167 3183 -3736 4 1026 37115 33 3 7 chr17 57826345 57832536 -37440115 - L1Md_T LINE L1 0 6582 422 4 1026 2894 181 24 2 chr17 57832539 57833048 -37439603 + MERVK26-int LTR ERVK 3172 3691 -3228 4 1026 6131 175 10 1 chr17 57833060 57834052 -37438599 + MERVK26-int LTR ERVK 5916 6916 -3 4 1026 1227 252 126 39 chr17 57834067 57834596 -37438055 + RLTR26 LTR ERVK 5 627 -15 4 1026 915 277 20 40 chr17 57834650 57834898 -37437753 + MTEb LTR MaLR 131 373 -6 4 1026 198 0 0 0 chr17 57834931 57834953 -37437698 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 4 1026 311 282 110 38 chr17 57836228 57836464 -37436187 - L1MB4 LINE L1 -42 6138 5886 4 1026 494 358 11 0 chr17 57837168 57837355 -37435296 - B3A SINE B2 -9 189 1 4 1026 654 242 8 0 chr17 57837505 57837637 -37435014 + B1_Mur4 SINE Alu 2 134 -16 4 1026 205 226 35 35 chr17 57837637 57837724 -37434927 + (CATA)n Simple_repeat Simple_repeat 2 88 0 4 1026 1903 228 78 35 chr17 57837829 57838315 -37434336 - RMER20A LTR ERVK -6 510 4 4 1026 36201 35 0 0 chr17 57838467 57844124 -37428527 + L1Md_T LINE L1 1 5589 -297 4 1026 9497 7 0 3 chr17 57844124 57845149 -37427502 + L1Md_T LINE L1 5590 6585 0 4 1026 621 357 35 12 chr17 57845874 57846132 -37426519 + B4A SINE B4 7 270 -22 4 1026 25 0 0 0 chr17 57846288 57846313 -37426338 + AT_rich Low_complexity Low_complexity 1 25 0 4 1026 1515 176 85 29 chr17 57847023 57847363 -37425288 - L1_Mur1 LINE L1 -3197 2689 2331 4 1026 388 232 0 10 chr17 57847352 57847452 -37425199 - MusHAL1 LINE L1 -2937 417 319 4 1026 336 312 18 35 chr17 57847763 57847876 -37424775 - MTD LTR MaLR -11 368 258 4 1026 565 339 29 51 chr17 57847957 57848231 -37424420 - MTD LTR MaLR -149 270 3 4 1026 853 328 59 4 chr17 57848626 57848880 -37423771 + B4 SINE B4 5 272 -20 4 1026 492 48 0 0 chr17 57848890 57848953 -37423698 + (CA)n Simple_repeat Simple_repeat 1 63 0 4 1026 7367 129 12 5 chr17 57849192 57850912 -37421739 - Lx LINE L1 -6 6648 4916 4 1026 5116 178 36 38 chr17 57850906 57851974 -37420677 + L1_Mur1 LINE L1 1 1066 -5916 4 1026 461 127 0 12 chr17 57852199 57852218 -37420433 + L1Md_F2 LINE L1 5145 5163 -720 4 1026 5188 63 6 2 chr17 57852218 57852853 -37419798 + L1Md_F2 LINE L1 5944 6581 -1 4 1026 461 127 0 12 chr17 57852853 57852913 -37419738 + L1Md_F2 LINE L1 5164 5223 -660 4 1026 2956 127 170 1 chr17 57852880 57853400 -37419251 + L1Md_F2 LINE L1 4973 5582 -304 4 1026 8853 32 4 7 chr17 57853407 57854406 -37418245 + L1Md_F2 LINE L1 5587 6582 0 4 1026 7436 103 20 4 chr17 57854407 57855116 -37417535 + Lx3_Mus LINE L1 5253 5955 -1054 4 1026 1137 97 7 0 chr17 57855116 57855261 -37417390 - B1_Mus2 SINE Alu 0 147 2 4 1026 7436 126 62 32 chr17 57855261 57856142 -37416509 + Lx3_Mus LINE L1 5956 6887 -122 4 1026 4666 127 10 3 chr17 57856139 57856848 -37415803 - L1VL4 LINE L1 -5390 912 199 4 1026 378 0 0 0 chr17 57857143 57857185 -37415466 + (CAA)n Simple_repeat Simple_repeat 1 42 0 4 1026 1717 193 115 31 chr17 57857805 57858327 -37414324 - RMER4B LTR ERVK -2 583 18 4 1026 737 298 152 4 chr17 57858424 57858667 -37413984 - B4 SINE B4 -12 280 2 4 1026 758 376 7 11 chr17 57858823 57859108 -37413543 + B4A SINE B4 5 288 -4 4 1026 258 328 85 95 chr17 57859151 57859340 -37413311 + MER5A DNA MER1_type 3 189 0 4 1026 1347 65 0 31 chr17 57859372 57859563 -37413088 + L1Md_F2 LINE L1 6375 6559 -23 4 1026 243 0 0 0 chr17 57859563 57859590 -37413061 + (TAA)n Simple_repeat Simple_repeat 1 27 0 4 1026 571 319 12 19 chr17 57859806 57859966 -37412685 + RSINE1 SINE B4 6 164 -1 4 1026 462 79 0 0 chr17 57860051 57860114 -37412537 + (TATG)n Simple_repeat Simple_repeat 4 66 0 4 1026 225 65 0 0 chr17 57860202 57860233 -37412418 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1026 542 344 62 23 chr17 57860246 57860502 -37412149 - B4 SINE B4 -6 286 21 4 1026 1403 217 175 26 chr17 57861572 57861960 -37410691 - RLTR41 LTR ERV1 0 446 1 4 1026 277 329 12 0 chr17 57862736 57862821 -37409830 + B4A SINE B4 5 90 -202 4 1026 2267 157 34 47 chr17 57862825 57863273 -37409378 + RLTR11B LTR ERVK 2 443 -10 4 1026 407 361 37 37 chr17 57863271 57863435 -37409216 + B4A SINE B4 129 292 0 4 1026 320 94 19 0 chr17 57863443 57863496 -37409155 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1026 831 112 0 0 chr17 57863496 57863647 -37409004 + (GA)n Simple_repeat Simple_repeat 2 153 0 4 1026 502 310 24 54 chr17 57863783 57863950 -37408701 + RSINE1 SINE B4 3 164 -1 4 1026 2578 21 0 0 chr17 57864316 57864607 -37408044 + L1Md_T LINE L1 6016 6306 -276 4 1026 788 221 157 52 chr17 57864926 57865196 -37407455 + Lx6 LINE L1 7208 7696 0 4 1026 305 311 28 9 chr17 57865337 57865444 -37407207 - PB1D10 SINE Alu -8 109 1 4 1026 376 345 13 67 chr17 57865862 57866011 -37406640 + RSINE1 SINE B4 2 142 -23 4 1026 495 0 0 0 chr17 57866015 57866070 -37406581 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1026 342 0 0 0 chr17 57866070 57866107 -37406544 + (GA)n Simple_repeat Simple_repeat 2 39 0 4 1026 198 236 0 0 chr17 57866169 57866224 -37406427 + GA-rich Low_complexity Low_complexity 2 56 0 4 1026 35 71 0 0 chr17 57866310 57866380 -37406271 + AT_rich Low_complexity Low_complexity 1 70 0 4 1026 315 291 117 0 chr17 57867417 57867520 -37405131 - B4A SINE B4 -169 123 9 4 1026 211 104 20 40 chr17 57868053 57868103 -37404548 + T-rich Low_complexity Low_complexity 4 52 0 4 1026 394 331 27 27 chr17 57868128 57868277 -37404374 - RSINE1 SINE B4 -14 151 3 4 1026 696 223 0 0 chr17 57869049 57869179 -37403472 + ORR1D1 LTR MaLR 3 132 -242 4 1026 297 291 48 10 chr17 57869171 57869275 -37403376 + B4A SINE B4 182 289 -3 4 1026 315 105 0 0 chr17 57869388 57869445 -37403206 + (CAGAGA)n Simple_repeat Simple_repeat 2 58 0 4 1026 225 274 13 40 chr17 57869687 57869763 -37402888 - MTEb LTR MaLR -27 352 279 4 1026 588 305 80 30 chr17 57869842 57870106 -37402545 + MT2A LTR ERVL 257 533 0 4 1026 515 78 0 13 chr17 57870212 57870290 -37402361 + (CA)n Simple_repeat Simple_repeat 2 78 0 4 1026 1107 124 0 0 chr17 57870570 57870747 -37401904 + (GA)n Simple_repeat Simple_repeat 1 177 0 4 1026 532 209 11 17 chr17 57870747 57870922 -37401729 + GA-rich Low_complexity Low_complexity 1 174 0 4 1026 422 314 28 28 chr17 57870922 57871063 -37401588 + ID_B1 SINE B4 80 220 -4 4 1026 3053 33 0 3 chr17 57871709 57872047 -37400604 + IAPLTR1a_Mm LTR ERVK 1 337 0 4 1026 56857 21 13 5 chr17 57872047 57878471 -37394180 + IAPEz-int LTR ERVK 8 6481 0 4 1026 3053 33 0 3 chr17 57878471 57878809 -37393842 + IAPLTR1a_Mm LTR ERVK 1 337 0 4 1026 615 229 129 17 chr17 57879030 57879226 -37393425 + MTEb LTR MaLR 1 215 -164 4 1026 199 160 67 0 chr17 57879227 57879302 -37393349 + CT-rich Low_complexity Low_complexity 1 80 0 4 1026 705 265 30 0 chr17 57879304 57879470 -37393181 + MTEb LTR MaLR 202 372 -7 4 1026 267 103 0 0 chr17 57879848 57879887 -37392764 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1026 918 309 11 19 chr17 57879895 57880162 -37392489 - B4A SINE B4 -23 269 5 4 1026 562 25 12 47 chr17 57882337 57882422 -37390229 + (GA)n Simple_repeat Simple_repeat 1 82 0 4 1026 27 0 0 0 chr17 57882580 57882607 -37390044 + AT_rich Low_complexity Low_complexity 1 27 0 4 1026 209 305 70 78 chr17 57883179 57883321 -37389330 + MIR3 SINE MIR 4 144 -64 4 1026 330 80 0 0 chr17 57883363 57883413 -37389238 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 4 1026 486 372 30 46 chr17 57883831 57884068 -37388583 + B4A SINE B4 35 267 -25 4 1026 243 0 0 0 chr17 57884073 57884100 -37388551 + (CCTA)n Simple_repeat Simple_repeat 1 27 0 4 1026 405 0 0 0 chr17 57884100 57884144 -37388507 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1026 504 0 0 0 chr17 57884144 57884199 -37388452 + (GA)n Simple_repeat Simple_repeat 2 57 0 4 1026 482 31 0 15 chr17 57884896 57884961 -37387690 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 1026 232 341 0 79 chr17 57885512 57885601 -37387050 + RSINE1 SINE B4 84 165 0 4 1026 496 323 13 6 chr17 57885795 57885954 -37386697 - MTE2b LTR MaLR -219 160 1 4 1026 478 149 0 0 chr17 57886987 57887061 -37385590 + U4 snRNA snRNA 1 74 -71 4 1026 379 337 82 56 chr17 57887451 57887718 -37384933 + B4 SINE B4 3 276 -16 4 1026 743 247 103 11 chr17 57887735 57887829 -37384822 + RLTR20A LTR ERVK 341 450 -91 4 1026 204 67 0 0 chr17 57887829 57887859 -37384792 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1026 743 247 103 11 chr17 57887859 57887948 -37384703 + RLTR20A LTR ERVK 451 540 -1 4 1026 2693 99 10 5 chr17 57887951 57888337 -37384314 - MTB LTR MaLR -12 388 1 4 1026 3704 196 61 30 chr17 57889002 57889965 -37382686 + MYSERV16_I-int LTR ERVK 1 1353 -1489 4 1026 5029 170 52 7 chr17 57889946 57891080 -37381571 + MYSERV16_I-int LTR ERVK 1067 2251 -75 4 1026 626 220 152 0 chr17 57891154 57891203 -37381448 + RLTR20A LTR ERVK 389 439 -102 4 1026 546 16 0 0 chr17 57891203 57891266 -37381385 + (TG)n Simple_repeat Simple_repeat 1 63 0 5 1026 626 220 152 0 chr17 57891266 57891348 -37381303 + RLTR20A LTR ERVK 440 539 -2 4 1026 405 0 0 0 chr17 57891349 57891394 -37381257 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 5 1026 21 36 0 0 chr17 57891510 57891538 -37381113 + AT_rich Low_complexity Low_complexity 1 28 0 5 1026 4304 74 0 24 chr17 57891546 57892138 -37380513 - L1Md_F2 LINE L1 0 6582 6005 5 1026 8055 23 3 0 chr17 57892149 57893120 -37379531 - L1Md_F2 LINE L1 -14 6568 5595 5 1026 2830 169 18 14 chr17 57893357 57893916 -37378735 - RLTR31_Mm LTR ERVK 0 561 1 5 1026 896 272 113 17 chr17 57894115 57894407 -37378244 + MTEa LTR MaLR 1 320 -59 5 1026 745 306 127 8 chr17 57895270 57895514 -37377137 + B4A SINE B4 20 292 0 5 1026 477 0 0 0 chr17 57895535 57895588 -37377063 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 1026 198 0 0 0 chr17 57896570 57896592 -37376059 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 5 1026 811 224 50 21 chr17 57898580 57898795 -37373856 - RLTR20B1 LTR ERVK -327 214 9 5 1026 838 281 34 39 chr17 57898885 57899118 -37373533 + B4A SINE B4 7 238 -54 5 1026 2210 146 30 33 chr17 57899383 57899568 -37373083 - RMER10B LTR ERVL -3 395 221 5 1026 387 0 0 0 chr17 57899568 57899611 -37373040 + (GA)n Simple_repeat Simple_repeat 2 44 0 5 1026 2210 146 30 33 chr17 57899611 57899821 -37372830 - RMER10B LTR ERVL -178 220 1 5 1026 456 270 112 54 chr17 57899938 57900161 -37372490 + B4 SINE B4 2 237 -55 5 1026 390 42 0 0 chr17 57900253 57900301 -37372350 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1026 237 186 0 0 chr17 57900431 57900501 -37372150 + T-rich Low_complexity Low_complexity 1 70 0 5 1026 387 0 0 0 chr17 57900515 57900558 -37372093 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1026 359 342 108 88 chr17 57900576 57900826 -37371825 - B4A SINE B4 -37 255 1 5 1026 349 392 0 7 chr17 57900826 57900971 -37371680 - B4A SINE B4 -65 227 84 5 1026 310 285 145 6 chr17 57901589 57901755 -37370896 - MER2 DNA MER2_type -43 302 114 5 1026 456 150 0 0 chr17 57902218 57902298 -37370353 + (TCTCCC)n Simple_repeat Simple_repeat 6 85 0 5 1026 23 33 0 0 chr17 57902810 57902840 -37369811 + AT_rich Low_complexity Low_complexity 1 30 0 5 1026 669 299 59 32 chr17 57902984 57903205 -37369446 + B4A SINE B4 5 231 -61 5 1026 715 291 5 42 chr17 57903213 57903403 -37369248 + B3A SINE B2 16 198 0 5 1026 747 210 7 20 chr17 57904115 57904261 -37368390 + B3A SINE B2 4 147 -51 5 1026 294 95 0 0 chr17 57904262 57904304 -37368347 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1026 362 183 0 41 chr17 57905065 57905162 -37367489 - L1Md_F2 LINE L1 -1 6581 6489 5 1026 1111 88 0 13 chr17 57906314 57906463 -37366188 - B1_Mm SINE Alu 0 147 1 5 1026 880 92 0 0 chr17 57907401 57907520 -37365131 - B1_Mm SINE Alu 0 147 29 5 1026 258 22 64 21 chr17 57907557 57907604 -37365047 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 5 1026 2233 145 51 12 chr17 57907774 57908373 -37364278 + Lx LINE L1 5917 6564 -2 5 1026 549 44 0 0 chr17 57908398 57908466 -37364185 + (GA)n Simple_repeat Simple_repeat 1 68 0 5 1026 223 195 0 0 chr17 57908891 57908932 -37363719 + A-rich Low_complexity Low_complexity 1 41 0 5 1026 1283 96 37 16 chr17 57912616 57912807 -37359844 + B2_Mm2 SINE B2 1 195 0 5 1026 1197 54 7 0 chr17 57913045 57913192 -37359459 - B1_Mus1 SINE Alu 0 148 1 5 1026 4878 44 13 3 chr17 57913398 57914010 -37358641 + L1Md_F3 LINE L1 5966 6583 -1 5 1026 27 0 0 0 chr17 57914160 57914187 -37358464 + AT_rich Low_complexity Low_complexity 1 27 0 5 1026 408 91 0 0 chr17 57915240 57915306 -37357345 + (CA)n Simple_repeat Simple_repeat 1 66 0 5 1026 201 74 0 0 chr17 57915810 57915837 -37356814 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1026 516 301 0 93 chr17 57916380 57916552 -37356099 - B3 SINE B2 -1 215 60 5 1026 264 59 0 0 chr17 57916596 57916630 -37356021 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1026 215 31 31 0 chr17 57916841 57916873 -37355778 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1026 381 352 20 27 chr17 57916897 57917043 -37355608 - RSINE1 SINE B4 -19 146 2 5 1026 235 314 0 28 chr17 57917965 57918037 -37354614 + B4 SINE B4 2 71 -221 5 1026 779 39 10 0 chr17 57918566 57918669 -37353982 + (GA)n Simple_repeat Simple_repeat 2 105 0 5 1026 866 324 86 21 chr17 57919232 57919569 -37353082 + MTE2b LTR MaLR 19 377 -2 5 1026 257 228 51 0 chr17 57920601 57920680 -37351971 + L1MC5 LINE L1 7155 7237 -724 5 1026 6473 24 3 0 chr17 57920758 57921506 -37351145 - L1Md_F2 LINE L1 -5 6577 5828 5 1026 212 378 69 99 chr17 57921826 57921839 -37350812 - B4A SINE B4 -66 226 217 5 1026 4937 124 28 1 chr17 57921839 57922598 -37350053 - L1_Mus4 LINE L1 -6 6630 5852 5 1026 212 378 69 99 chr17 57922598 57922816 -37349835 - B4A SINE B4 -76 216 2 5 1026 24 0 0 0 chr17 57923073 57923097 -37349554 + AT_rich Low_complexity Low_complexity 1 24 0 5 1026 236 292 0 22 chr17 57923097 57923188 -37349463 - L1MA6 LINE L1 -15 6285 6197 5 1026 24 67 0 0 chr17 57924014 57924059 -37348592 + AT_rich Low_complexity Low_complexity 1 45 0 5 1026 605 301 142 4 chr17 57924211 57924451 -37348200 - B4A SINE B4 -16 276 4 5 1026 255 161 0 0 chr17 57925027 57925083 -37347568 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1026 354 61 0 0 chr17 57925132 57925181 -37347470 + (TC)n Simple_repeat Simple_repeat 2 50 0 5 1026 259 269 51 0 chr17 57925247 57925325 -37347326 + RSINE1 SINE B4 26 107 -58 5 1026 350 335 95 85 chr17 57925393 57925687 -37346964 - ORR1E LTR MaLR 0 359 63 5 1026 1935 230 67 26 chr17 57925691 57925776 -37346875 - RMER13B LTR ERVK 0 908 812 5 1026 423 0 0 0 chr17 57925776 57925823 -37346828 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1026 1935 230 67 26 chr17 57925823 57926228 -37346423 - RMER13B LTR ERVK -97 811 399 5 1026 990 157 13 0 chr17 57926224 57926383 -37346268 - RMER13B LTR ERVK -624 284 124 5 1026 658 140 0 0 chr17 57926378 57926478 -37346173 - B1_Mus1 SINE Alu -48 100 1 5 1026 276 365 37 83 chr17 57926478 57926693 -37345958 - B4A SINE B4 -61 231 27 5 1026 25 0 0 0 chr17 57926800 57926825 -37345826 + AT_rich Low_complexity Low_complexity 1 25 0 5 1026 1448 88 46 9 chr17 57926964 57927182 -37345469 - L1Md_F2 LINE L1 0 6582 6357 5 1026 5356 70 4 39 chr17 57927544 57928133 -37344518 + RLTR22_Mus LTR ERVK 1 587 -1221 5 1026 3060 61 8 10 chr17 57928133 57928530 -37344121 - MTA_Mm LTR MaLR 0 396 1 5 1026 7554 75 9 73 chr17 57928530 57929703 -37342948 - MTA_Mm-int LTR MaLR 0 1098 1 5 1026 5356 70 4 39 chr17 57929703 57929882 -37342769 + RLTR22_Mus LTR ERVK 588 742 -1066 5 1026 9189 75 3 21 chr17 57929890 57932058 -37340593 - L1_Mus1 LINE L1 0 6567 4448 5 1026 778 209 14 105 chr17 57932071 57932280 -37340371 + ORR1D1 LTR MaLR 1 190 -184 5 1026 269 94 38 0 chr17 57932290 57932343 -37340308 + (TCTG)n Simple_repeat Simple_repeat 4 58 0 5 1026 769 229 51 61 chr17 57932343 57932557 -37340094 + ORR1D1 LTR MaLR 163 374 0 5 1026 186 250 96 0 chr17 57932629 57932681 -37339970 - L3 LINE CR1 -443 4046 3990 5 1026 672 311 19 37 chr17 57932778 57932992 -37339659 + ID_B1 SINE B4 12 221 -3 5 1026 777 22 0 0 chr17 57933590 57933681 -37338970 + (GA)n Simple_repeat Simple_repeat 1 91 0 5 1026 297 0 0 0 chr17 57933715 57933748 -37338903 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 1026 189 0 0 0 chr17 57933748 57933768 -37338883 + (GA)n Simple_repeat Simple_repeat 1 21 0 5 128 315 0 0 0 chr17 57933808 57933843 -37338808 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1027 362 74 19 0 chr17 57933843 57933897 -37338754 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 1027 650 342 38 47 chr17 57933897 57934133 -37338518 - B4 SINE B4 -22 270 37 5 1027 419 376 43 8 chr17 57934408 57934575 -37338076 + B4A SINE B4 112 291 -1 5 1027 312 102 0 0 chr17 57934578 57934627 -37338024 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1027 481 362 7 7 chr17 57935505 57935647 -37337004 - B4A SINE B4 -109 183 42 5 1027 339 192 0 0 chr17 57935894 57935967 -37336684 + CT-rich Low_complexity Low_complexity 2 74 0 5 1027 301 335 157 7 chr17 57936294 57936447 -37336204 + MER45C DNA Tip100 1 176 -777 5 1027 284 380 47 41 chr17 57936830 57937000 -37335651 + MER45C DNA Tip100 654 824 -129 5 1027 537 58 0 0 chr17 57937012 57937081 -37335570 + (TA)n Simple_repeat Simple_repeat 2 70 0 5 1027 361 348 35 76 chr17 57937088 57937259 -37335392 - RSINE1 SINE B4 0 165 2 5 1027 2087 100 77 37 chr17 57937589 57937942 -37334709 - RLTR9E LTR ERVK 0 409 43 5 1027 768 327 21 52 chr17 57938407 57938697 -37333954 - B4A SINE B4 -3 289 9 5 1027 1207 61 0 0 chr17 57939740 57939887 -37332764 - B1_Mus2 SINE Alu 0 147 1 5 1027 884 113 65 19 chr17 57939898 57940052 -37332599 - L1Md_F2 LINE L1 -2 6580 6420 5 1027 273 183 43 0 chr17 57940066 57940159 -37332492 + (TATG)n Simple_repeat Simple_repeat 2 98 0 5 1027 316 231 25 8 chr17 57940174 57940292 -37332359 + GA-rich Low_complexity Low_complexity 3 122 0 5 1027 453 346 0 8 chr17 57941060 57941188 -37331463 - B4 SINE B4 -165 127 1 5 1027 237 359 0 0 chr17 57941412 57941490 -37331161 + ID_B1 SINE B4 139 216 -8 5 1027 204 103 0 0 chr17 57941492 57941521 -37331130 + (GAAAA)n Simple_repeat Simple_repeat 5 33 0 5 1027 321 89 0 0 chr17 57941521 57941566 -37331085 + (GGGGA)n Simple_repeat Simple_repeat 5 49 0 5 1027 329 314 120 14 chr17 57941568 57941710 -37330941 + HAL1-3A_ME LINE L1 2284 2440 -418 5 1027 21 0 0 0 chr17 57942025 57942046 -37330605 + AT_rich Low_complexity Low_complexity 1 21 0 5 1027 213 39 0 0 chr17 57942490 57942516 -37330135 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 1027 245 51 26 0 chr17 57942516 57942555 -37330096 + (GA)n Simple_repeat Simple_repeat 2 41 0 5 1027 1647 330 85 43 chr17 57942582 57943845 -37328806 - Lx8 LINE L1 -552 7144 5847 5 1027 273 273 28 92 chr17 57943855 57943964 -37328687 + MT2B LTR ERVL 152 253 -348 6 1027 654 289 7 10 chr17 57943868 57944030 -37328621 + ID_B1 SINE B4 87 245 -47 6 1027 214 167 0 0 chr17 57944030 57944066 -37328585 + GA-rich Low_complexity Low_complexity 2 37 0 6 1027 984 136 0 0 chr17 57944067 57944243 -37328408 + (GGAA)n Simple_repeat Simple_repeat 3 178 0 6 1027 625 308 83 21 chr17 57944390 57944765 -37327886 - Lx8 LINE L1 -59 7414 7017 6 1027 658 364 9 5 chr17 57945453 57945663 -37326988 + ID_B1 SINE B4 6 216 -8 6 1027 408 326 62 6 chr17 57946341 57946520 -37326131 - RMER5 LTR ERV1 -2 532 344 6 1027 378 0 0 0 chr17 57947067 57947109 -37325542 + (CAA)n Simple_repeat Simple_repeat 2 43 0 6 1027 264 211 0 37 chr17 57947819 57947873 -37324778 + ID_B1 SINE B4 172 223 -1 6 1027 423 172 43 12 chr17 57947877 57948051 -37324600 + GA-rich Low_complexity Low_complexity 1 179 0 6 1027 487 356 42 21 chr17 57948483 57948675 -37323976 + B4A SINE B4 97 292 0 6 1027 590 265 15 113 chr17 57948741 57948945 -37323706 + ORR1E LTR MaLR 109 292 -67 6 1027 1642 241 16 22 chr17 57949207 57949576 -37323075 + ORR1D1 LTR MaLR 6 372 -2 6 1027 327 78 0 0 chr17 57949653 57949704 -37322947 + (TCTCTG)n Simple_repeat Simple_repeat 4 54 0 6 1027 665 373 32 4 chr17 57951786 57952066 -37320585 + B4A SINE B4 1 288 -4 6 1027 254 185 19 0 chr17 57952079 57952133 -37320518 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1027 285 253 67 0 chr17 57952846 57952921 -37319730 - MTEb LTR MaLR -189 190 111 6 1027 909 93 20 0 chr17 57952957 57953108 -37319543 + (TC)n Simple_repeat Simple_repeat 1 154 0 6 1027 261 0 0 0 chr17 57953108 57953136 -37319515 + (CA)n Simple_repeat Simple_repeat 1 29 0 6 1027 3128 85 7 5 chr17 57953366 57953815 -37318836 + L1_Mus3 LINE L1 6144 6593 -45 6 1027 22 35 0 0 chr17 57953899 57953928 -37318723 + AT_rich Low_complexity Low_complexity 1 29 0 6 1027 8052 26 4 0 chr17 57953928 57955353 -37317298 - L1Md_A LINE L1 -2 6580 5153 6 1027 13220 16 1 0 chr17 57955352 57956944 -37315707 + L1Md_A LINE L1 3552 5144 -739 6 1027 291 59 0 0 chr17 57956940 57956991 -37315660 + Lx LINE L1 6602 6652 -2 6 1027 16273 160 22 18 chr17 57957810 57961950 -37310701 - Lx LINE L1 -4 6650 2503 6 1027 7237 81 1 0 chr17 57961963 57963554 -37309097 - L1_Mus1 LINE L1 -14 6553 4961 6 1027 7303 123 22 7 chr17 57963554 57965486 -37307165 - L1VL2 LINE L1 -1399 2216 254 6 1027 204 328 82 0 chr17 57965578 57965639 -37307012 - MIRc SINE MIR -87 181 116 6 1027 210 71 0 0 chr17 57966980 57967008 -37305643 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 1027 461 333 78 24 chr17 57967142 57967308 -37305343 + B4A SINE B4 1 175 -117 6 1027 435 38 0 0 chr17 57967432 57967485 -37305166 + (CA)n Simple_repeat Simple_repeat 1 53 0 6 1027 4126 93 13 22 chr17 57968293 57969025 -37303626 + Lx3_Mus LINE L1 5255 5981 -1028 6 1027 190 0 0 62 chr17 57970002 57970034 -37302617 + (TTA)n Simple_repeat Simple_repeat 1 30 0 6 1027 5100 98 14 3 chr17 57970035 57970761 -37301890 - L1_Mus4 LINE L1 -17 6619 5886 6 1027 885 123 0 0 chr17 57971405 57971543 -37301108 + (TTTC)n Simple_repeat Simple_repeat 2 139 0 6 1027 1093 67 0 0 chr17 57971546 57971681 -37300970 - B1_Mus2 SINE Alu -12 135 1 6 1027 1435 28 0 11 chr17 57972397 57972579 -37300072 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 6 1027 224 163 23 0 chr17 57972579 57972622 -37300029 + CT-rich Low_complexity Low_complexity 2 45 0 6 1027 417 355 50 14 chr17 57972780 57972920 -37299731 - B4A SINE B4 -143 149 5 6 1027 456 318 91 72 chr17 57973532 57973796 -37298855 + B4 SINE B4 1 269 -23 6 1027 450 0 0 0 chr17 57973796 57973846 -37298805 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1027 701 166 7 0 chr17 57973858 57974003 -37298648 + GA-rich Low_complexity Low_complexity 1 146 0 6 1027 2499 146 7 0 chr17 57974363 57974767 -37297884 + MTB_Mm LTR MaLR 1 407 0 6 1027 466 349 0 50 chr17 57974916 57975076 -37297575 - RSINE1 SINE B4 0 165 14 6 1027 258 253 12 31 chr17 57975595 57975758 -37296893 + (TA)n Simple_repeat Simple_repeat 1 160 0 6 1027 354 194 0 0 chr17 57975779 57975851 -37296800 + (TA)n Simple_repeat Simple_repeat 2 73 0 6 1027 474 49 0 0 chr17 57975865 57975926 -37296725 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 1027 195 100 0 0 chr17 57976551 57976581 -37296070 + (CAGAGA)n Simple_repeat Simple_repeat 1 30 0 6 1027 495 0 0 0 chr17 57976609 57976664 -37295987 + (TC)n Simple_repeat Simple_repeat 1 55 0 6 1027 310 270 0 0 chr17 57977471 57977545 -37295106 + (CA)n Simple_repeat Simple_repeat 2 75 0 6 1027 26 30 0 0 chr17 57977687 57977720 -37294931 + AT_rich Low_complexity Low_complexity 1 33 0 6 1027 22 35 0 0 chr17 57977797 57977826 -37294825 + AT_rich Low_complexity Low_complexity 1 29 0 6 1027 31 58 0 0 chr17 57978834 57978886 -37293765 + AT_rich Low_complexity Low_complexity 1 52 0 6 1027 248 161 0 35 chr17 57978919 57978977 -37293674 + (CATA)n Simple_repeat Simple_repeat 1 56 0 6 1027 432 361 0 0 chr17 57979487 57979606 -37293045 - ID_B1 SINE B4 -19 205 87 6 1027 378 345 42 57 chr17 57979775 57980058 -37292593 - MLT1A0 LTR MaLR -10 355 77 6 1027 238 83 0 77 chr17 57980091 57980143 -37292508 + (CATATA)n Simple_repeat Simple_repeat 4 51 0 6 1027 1048 109 0 0 chr17 57980935 57981082 -37291569 - B1_Mus1 SINE Alu 0 148 2 6 1027 10090 67 2 5 chr17 57981439 57983537 -37289114 + L1Md_F2 LINE L1 4493 6582 0 6 1027 1402 245 39 13 chr17 57984010 57984320 -37288331 + MTD LTR MaLR 102 419 0 6 1027 194 365 94 8 chr17 57984392 57984519 -37288132 + MER5B DNA MER1_type 41 178 0 6 1027 437 347 33 58 chr17 57984530 57984860 -37287791 - L3 LINE CR1 -80 4409 4088 6 1027 196 294 44 40 chr17 57985699 57985812 -37286839 + MIRm SINE MIR 56 166 -102 6 1027 541 337 11 66 chr17 57985828 57986009 -37286642 + B4A SINE B4 4 174 -118 6 1027 180 0 0 0 chr17 57986022 57986042 -37286609 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 6 1027 267 31 0 0 chr17 57986042 57986074 -37286577 + (CAAAG)n Simple_repeat Simple_repeat 3 34 0 6 1027 358 149 43 0 chr17 57986613 57986707 -37285944 + (TCTCTG)n Simple_repeat Simple_repeat 2 99 0 6 1027 294 325 104 63 chr17 57986749 57987018 -37285633 - B4A SINE B4 -10 282 3 6 1027 586 300 170 0 chr17 57988315 57988515 -37284136 - B4A SINE B4 -56 236 3 6 1027 567 0 0 0 chr17 57989284 57989347 -37283304 + (TC)n Simple_repeat Simple_repeat 2 64 0 6 1027 234 176 0 0 chr17 57990191 57990242 -37282409 + GA-rich Low_complexity Low_complexity 2 52 0 6 1027 1071 311 99 12 chr17 57990603 57990948 -37281703 + MTE2b LTR MaLR 1 375 -4 6 1027 413 344 24 0 chr17 57991587 57991712 -37280939 - RSINE1 SINE B4 -33 132 5 6 1027 4123 144 52 1 chr17 57991772 57992467 -37280184 - Lx3B LINE L1 -6 6967 6238 6 1027 209 375 178 0 chr17 57992699 57992851 -37279800 - MIR3 SINE MIR -6 202 24 6 1027 635 331 48 7 chr17 57993389 57993660 -37278991 - B4A SINE B4 -10 282 1 6 1027 33 25 0 0 chr17 57994381 57994421 -37278230 + AT_rich Low_complexity Low_complexity 1 40 0 6 1027 6049 7 0 1 chr17 57995357 57996032 -37276619 - L1Md_T LINE L1 0 6582 5909 6 1027 649 336 87 24 chr17 57996133 57996386 -37276265 - B4A SINE B4 -22 270 2 6 1027 555 16 0 0 chr17 57996808 57996872 -37275779 + (TCTA)n Simple_repeat Simple_repeat 3 66 0 6 1027 342 388 29 23 chr17 57997244 57997418 -37275233 + B4A SINE B4 5 179 -113 6 1027 300 175 0 0 chr17 57997419 57997482 -37275169 + (CATA)n Simple_repeat Simple_repeat 4 66 0 6 1027 234 143 0 0 chr17 57997483 57997532 -37275119 + (GA)n Simple_repeat Simple_repeat 2 50 0 6 1027 859 168 130 19 chr17 57998204 57998411 -37274240 + Lx4A LINE L1 6827 7056 -2 6 1027 1119 157 62 0 chr17 57998483 57998693 -37273958 - Lx2 LINE L1 0 6997 6775 6 1027 3459 127 12 12 chr17 57998692 57999275 -37273376 - Lx2 LINE L1 -353 6644 6062 6 1027 366 23 0 0 chr17 57999351 57999394 -37273257 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 1027 486 0 0 0 chr17 57999394 57999447 -37273204 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 1027 1600 204 53 32 chr17 57999620 58000000 -37272651 - RMER13B LTR ERVK 0 908 521 6 1027 3035 142 15 23 chr17 58000000 58000520 -37272131 - RMER13B LTR ERVK -390 518 3 1 1027 1079 282 56 9 chr17 58000522 58000841 -37271810 - MTE2b LTR MaLR -6 373 40 2 1027 2345 231 96 41 chr17 58002218 58003002 -37269649 - RLTR22_Mur LTR ERVK -220 1628 822 3 1027 409 135 4 89 chr17 58003050 58003166 -37269485 - L1_Mur3 LINE L1 -982 2932 2825 4 1027 267 288 51 88 chr17 58003265 58003402 -37269249 + RMER15 LTR ERVL 1 132 -443 5 1027 430 314 246 8 chr17 58003430 58003674 -37268977 + RMER15 LTR ERVL 274 575 0 5 1027 890 283 140 51 chr17 58003914 58004286 -37268365 + MTD LTR MaLR 1 405 -14 6 1027 308 200 42 10 chr17 58004539 58004635 -37268016 + Lx5 LINE L1 6952 7050 0 7 1027 26 30 0 0 chr17 58004758 58004791 -37267860 + AT_rich Low_complexity Low_complexity 1 33 0 8 1027 307 246 18 0 chr17 58004841 58004955 -37267696 - Lx9 LINE L1 -2 7642 7527 9 1027 253 0 0 51 chr17 58006332 58006371 -37266280 + (TATAA)n Simple_repeat Simple_repeat 1 37 0 1 1027 252 372 94 7 chr17 58006770 58006919 -37265732 + RSINE1 SINE B4 2 163 -2 1 1027 294 98 0 0 chr17 58007147 58007198 -37265453 + (A)n Simple_repeat Simple_repeat 1 51 0 1 1027 347 0 23 0 chr17 58007495 58007538 -37265113 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1027 528 68 0 0 chr17 58007553 58007626 -37265025 + (GA)n Simple_repeat Simple_repeat 1 73 0 1 1027 6652 118 25 4 chr17 58008577 58009817 -37262834 - L1_Mus4 LINE L1 -2 6634 5374 1 1027 2644 34 0 45 chr17 58009817 58010154 -37262497 - RLTRETN_Mm LTR ERVK 0 322 1 1 1027 3203 149 7 16 chr17 58010154 58010219 -37262432 - L1_Mus4 LINE L1 -510 5373 5309 1 1027 5747 136 10 5 chr17 58010220 58011258 -37261393 + L1VL4 LINE L1 6 1049 -2510 1 1027 7283 111 19 52 chr17 58011256 58013421 -37259230 - L1VL2 LINE L1 -1481 2134 65 1 1027 781 256 17 6 chr17 58013424 58013716 -37258935 - L1_Mur2 LINE L1 -5800 1182 882 1 1027 1679 37 14 9 chr17 58014829 58015045 -37257606 - L1Md_F3 LINE L1 0 6584 6368 2 1027 209 267 156 26 chr17 58015131 58015208 -37257443 + L3 LINE CR1 3481 3567 -922 2 1027 224 361 0 0 chr17 58016137 58016209 -37256442 - ID4_ SINE ID -1 82 11 2 1027 704 259 133 31 chr17 58016310 58016565 -37256086 - B4 SINE B4 -8 284 4 2 1027 969 98 18 6 chr17 58016577 58016742 -37255909 + (TTTC)n Simple_repeat Simple_repeat 2 168 0 2 1027 23 54 0 0 chr17 58016771 58016808 -37255843 + AT_rich Low_complexity Low_complexity 1 37 0 2 1027 427 349 51 30 chr17 58017280 58017516 -37255135 + B4A SINE B4 43 283 -9 2 1027 598 227 51 28 chr17 58017487 58017649 -37255002 - MTD LTR MaLR -14 405 222 2 1027 245 352 184 40 chr17 58017672 58017900 -37254751 - MTD LTR MaLR -149 270 10 2 1027 234 298 0 47 chr17 58017935 58018062 -37254589 + (CATATA)n Simple_repeat Simple_repeat 3 123 0 2 1027 296 222 28 0 chr17 58018489 58018561 -37254090 + MER2 DNA MER2_type 115 188 -157 2 1027 280 329 37 0 chr17 58018573 58018655 -37253996 + MER2 DNA MER2_type 248 332 -13 2 1027 201 319 75 21 chr17 58018877 58018970 -37253681 - MIR SINE MIR -160 102 5 3 1027 324 48 0 0 chr17 58019469 58019511 -37253140 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1027 591 15 0 0 chr17 58019511 58019578 -37253073 + (GA)n Simple_repeat Simple_repeat 1 68 0 3 1027 1868 31 13 0 chr17 58019638 58019867 -37252784 + L1Md_F3 LINE L1 6351 6582 -2 3 1027 441 0 0 0 chr17 58020043 58020092 -37252559 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 1027 351 0 0 0 chr17 58020092 58020130 -37252521 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1027 661 343 41 27 chr17 58020391 58020610 -37252041 + B4A SINE B4 6 227 -65 3 1027 558 285 86 7 chr17 58020621 58020773 -37251878 + B3A SINE B2 2 165 -33 3 1027 253 47 23 23 chr17 58021031 58021075 -37251576 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1027 519 115 33 26 chr17 58021204 58021356 -37251295 + (CA)n Simple_repeat Simple_repeat 1 153 0 3 1027 650 251 62 38 chr17 58021610 58021821 -37250830 + ID_B1 SINE B4 2 217 -7 4 1027 1209 99 52 0 chr17 58021855 58022027 -37250624 + B2_Mm2 SINE B2 1 181 -14 4 1027 222 256 31 12 chr17 58022899 58022995 -37249656 + CT-rich Low_complexity Low_complexity 1 97 0 4 1027 454 263 17 9 chr17 58022995 58023110 -37249541 - PB1D7 SINE Alu 0 120 5 4 1027 518 113 0 9 chr17 58023526 58023633 -37249018 + (TC)n Simple_repeat Simple_repeat 2 107 0 4 1027 561 269 96 0 chr17 58023694 58023850 -37248801 - B3A SINE B2 -23 175 5 4 1027 471 53 13 26 chr17 58024303 58024380 -37248271 + (TTA)n Simple_repeat Simple_repeat 2 77 0 4 1027 203 194 0 31 chr17 58024787 58024851 -37247800 + GA-rich Low_complexity Low_complexity 5 66 0 4 1027 686 291 60 0 chr17 58025244 58025426 -37247225 - B4 SINE B4 -99 193 1 4 1027 452 348 74 30 chr17 58025740 58025971 -37246680 - B4A SINE B4 -47 245 5 4 1027 1513 333 47 82 chr17 58026779 58028033 -37244618 - Lx8 LINE L1 -136 7337 6128 5 1027 377 315 30 23 chr17 58028154 58028287 -37244364 - RSINE1 SINE B4 -28 137 4 5 1027 225 43 42 42 chr17 58028380 58028428 -37244223 + (TTTTTG)n Simple_repeat Simple_repeat 2 49 0 5 1027 23 33 0 0 chr17 58029593 58029623 -37243028 + AT_rich Low_complexity Low_complexity 1 30 0 5 1027 3538 188 78 32 chr17 58029905 58030770 -37241881 - RLTR25B LTR ERVK 0 1103 24 5 1027 738 303 9 32 chr17 58031841 58032059 -37240592 - MTE2a LTR MaLR 0 379 167 5 1027 24 0 0 0 chr17 58032060 58032084 -37240567 + AT_rich Low_complexity Low_complexity 1 24 0 5 1027 3127 163 18 61 chr17 58032094 58032714 -37239937 - Lx3B LINE L1 -4 6969 6377 5 1027 447 268 90 21 chr17 58032714 58032859 -37239792 + MTEa LTR MaLR 225 379 0 5 1027 22212 155 13 46 chr17 58033112 58039376 -37233275 - Lx LINE L1 -5 6649 615 5 1027 409 305 17 22 chr17 58039389 58039570 -37233081 - CR1_Mam LINE CR1 -1253 951 772 6 1027 270 327 88 44 chr17 58040182 58040341 -37232310 + B3 SINE B2 2 160 -38 6 1027 429 54 0 0 chr17 58040343 58040399 -37232252 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 1027 5168 133 3 1 chr17 58041345 58042118 -37230533 + Lx LINE L1 5873 6646 -8 6 1027 280 316 6 12 chr17 58042480 58042650 -37230001 + (TA)n Simple_repeat Simple_repeat 1 169 0 6 1027 869 277 133 6 chr17 58043006 58043322 -37229329 - ORR1E LTR MaLR -2 357 2 6 1027 629 158 116 46 chr17 58043327 58043500 -37229151 + B2_Mm2 SINE B2 3 187 -8 6 1027 525 315 34 14 chr17 58043638 58043786 -37228865 - B4 SINE B4 -4 288 138 6 1027 673 308 134 31 chr17 58045054 58045315 -37227336 + B4 SINE B4 5 292 0 6 1027 273 326 90 0 chr17 58045931 58046020 -37226631 - ID_B1 SINE B4 -34 190 94 6 1027 218 283 0 0 chr17 58046774 58046827 -37225824 - L3b LINE CR1 -254 228 176 7 1027 373 81 32 0 chr17 58046827 58046889 -37225762 + (TCC)n Simple_repeat Simple_repeat 2 65 0 7 1027 240 35 0 0 chr17 58046910 58046939 -37225712 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 7 1027 325 306 23 12 chr17 58046954 58047040 -37225611 + B4A SINE B4 2 88 -204 7 1027 416 0 62 0 chr17 58047041 58047105 -37225546 + (CAAAA)n Simple_repeat Simple_repeat 2 69 0 7 1027 772 301 5 28 chr17 58047106 58047321 -37225330 + B4A SINE B4 83 292 0 7 1027 260 357 114 1 chr17 58047836 58047976 -37224675 + B4 SINE B4 24 179 -113 7 1027 332 238 75 6 chr17 58048048 58048209 -37224442 + RMER10B LTR ERVL 94 265 -133 7 1027 442 191 19 32 chr17 58048210 58048367 -37224284 + CT-rich Low_complexity Low_complexity 2 156 0 7 1027 821 222 72 27 chr17 58048367 58048589 -37224062 + RMER10B LTR ERVL 167 398 0 7 1027 270 300 20 0 chr17 58048680 58048780 -37223871 + (CA)n Simple_repeat Simple_repeat 1 102 0 7 1027 550 126 0 19 chr17 58048793 58048898 -37223753 + (CA)n Simple_repeat Simple_repeat 2 104 0 7 1027 271 307 105 29 chr17 58049030 58049201 -37223450 + MLT1C LTR MaLR 1 184 -283 8 1027 1567 31 0 25 chr17 58049203 58049399 -37223252 + B2_Mm1a SINE B2 1 191 -2 8 1027 598 324 102 16 chr17 58049408 58049662 -37222989 + B4 SINE B4 4 279 -13 8 1027 356 354 54 40 chr17 58049703 58049927 -37222724 + MLT1C LTR MaLR 202 428 -39 8 1027 1271 53 35 6 chr17 58050106 58050276 -37222375 + L1_Mus1 LINE L1 6392 6566 -1 8 1027 606 219 26 40 chr17 58051676 58051828 -37220823 + RMER19A LTR ERVK 238 387 -350 8 1027 4526 95 3 5 chr17 58051828 58052494 -37220157 - L1_Mus4 LINE L1 -294 6342 5678 8 1027 582 160 0 48 chr17 58052491 58052616 -37220035 + L1_Mur2 LINE L1 5197 5315 -562 8 1027 30259 54 3 5 chr17 58052626 58058660 -37213991 - L1Md_F2 LINE L1 -1 6581 607 8 1027 2184 132 44 0 chr17 58058666 58059031 -37213620 + L1_Mm LINE L1 5306 5686 -197 8 1027 489 42 40 30 chr17 58059410 58059509 -37213142 + (TTTTG)n Simple_repeat Simple_repeat 2 101 0 8 1027 509 331 108 83 chr17 58059824 58060206 -37212445 - MT2A LTR ERVL -2 531 158 9 1027 461 32 16 0 chr17 58060206 58060269 -37212382 + (CA)n Simple_repeat Simple_repeat 1 64 0 9 1027 509 331 108 83 chr17 58060269 58060403 -37212248 - MT2A LTR ERVL -376 157 2 9 1027 466 347 50 0 chr17 58061011 58061233 -37211418 - Lx8 LINE L1 -236 7237 7005 9 1027 379 283 0 16 chr17 58061432 58061554 -37211097 + (TATG)n Simple_repeat Simple_repeat 1 120 0 9 1027 238 333 56 0 chr17 58061596 58061686 -37210965 - PB1D9 SINE Alu -11 109 15 9 1027 260 243 45 45 chr17 58061938 58062050 -37210601 + L1MA7 LINE L1 5961 6072 -219 9 1027 288 340 113 16 chr17 58062883 58063077 -37209574 - RMER15 LTR ERVL -16 559 347 9 1027 349 36 70 23 chr17 58064496 58064582 -37208069 + (TG)n Simple_repeat Simple_repeat 2 91 0 9 1027 452 389 28 5 chr17 58064640 58064857 -37207794 - B4A SINE B4 -13 279 58 9 1028 370 336 9 26 chr17 58065210 58065323 -37207328 - B4 SINE B4 -24 268 158 9 1028 216 306 222 0 chr17 58065955 58066027 -37206624 + B4 SINE B4 5 92 -200 1 1028 725 270 5 73 chr17 58066033 58066237 -37206414 + B3A SINE B2 9 198 0 1 1028 495 293 116 31 chr17 58066272 58066564 -37206087 + Lx6 LINE L1 7110 7426 -34 1 1028 445 318 0 26 chr17 58066660 58066773 -37205878 + B4 SINE B4 181 290 -2 1 1028 399 370 48 16 chr17 58066841 58067091 -37205560 - MIRb SINE MIR -8 260 3 1 1028 556 252 86 7 chr17 58067489 58067629 -37205022 - B4 SINE B4 -139 153 3 9 1028 198 93 74 0 chr17 58067693 58067747 -37204904 + (CAAA)n Simple_repeat Simple_repeat 2 59 0 1 1028 233 221 29 29 chr17 58068028 58068098 -37204553 + RLTR13D6 LTR ERVK 275 344 -558 1 1028 2072 199 33 8 chr17 58068370 58068766 -37203885 + MTC LTR MaLR 6 411 -10 1 1028 229 288 66 36 chr17 58068842 58069008 -37203643 + BLACKJACK DNA AcHobo 2270 2440 -504 1 1028 749 31 10 0 chr17 58069216 58069312 -37203339 + (TG)n Simple_repeat Simple_repeat 2 98 0 1 1028 538 339 109 12 chr17 58069356 58069613 -37203038 - B4A SINE B4 -3 289 8 1 1028 948 145 0 0 chr17 58069984 58070143 -37202508 + (TTTC)n Simple_repeat Simple_repeat 2 160 0 1 1028 1070 59 7 0 chr17 58070144 58070279 -37202372 - B1_Mus1 SINE Alu -12 136 1 1 1028 850 303 0 15 chr17 58070279 58070478 -37202173 - MTE2a LTR MaLR -75 304 109 1 1028 1374 225 125 9 chr17 58070478 58070626 -37202025 - ORR1C1 LTR MaLR -2 376 196 1 1028 1102 145 20 35 chr17 58070626 58070826 -37201825 - Lx LINE L1 -6 6648 6452 1 1028 1374 225 125 9 chr17 58070826 58071014 -37201637 - ORR1C1 LTR MaLR -183 195 1 1 1028 430 297 9 0 chr17 58071017 58071128 -37201523 - MTE2a LTR MaLR -267 112 1 1 1028 278 47 47 0 chr17 58071592 58071635 -37201016 + (TCTG)n Simple_repeat Simple_repeat 1 45 0 1 1028 2150 105 18 21 chr17 58071636 58071968 -37200683 + L1_Mus3 LINE L1 6303 6633 -5 1 1028 1699 161 12 21 chr17 58071968 58072305 -37200346 - L1_Mm LINE L1 -1012 4871 4538 1 1028 8248 147 16 27 chr17 58072319 58074672 -37197979 - L1VL4 LINE L1 -1226 2333 10 1 1028 2651 201 47 8 chr17 58074672 58075202 -37197449 - RLTR25A LTR ERVK -368 735 185 1 1028 542 272 0 0 chr17 58075197 58075311 -37197340 - MTEb LTR MaLR -159 220 107 1 1028 597 306 110 22 chr17 58075786 58076013 -37196638 - MTD LTR MaLR -39 380 134 1 1028 664 302 116 37 chr17 58076763 58077031 -37195620 - MTE2b LTR MaLR 0 379 91 1 1028 567 0 0 0 chr17 58077257 58077320 -37195331 + (TTC)n Simple_repeat Simple_repeat 2 64 0 1 1028 558 79 146 0 chr17 58077323 58077412 -37195239 - B1_Mus2 SINE Alu -5 142 41 1 1028 332 287 69 0 chr17 58077324 58077425 -37195226 - B4 SINE B4 -72 220 113 1 1028 5765 17 0 0 chr17 58077440 58078092 -37194559 - L1Md_A LINE L1 0 6582 5931 1 1028 1742 5 0 0 chr17 58078092 58078296 -37194355 + L1Md_A LINE L1 5724 5927 -655 1 1028 325 282 116 33 chr17 58078339 58078460 -37194191 - MTEb LTR MaLR -18 361 231 1 1028 465 281 154 11 chr17 58078639 58078944 -37193707 + MLT1B LTR MaLR 1 390 0 1 1028 207 0 0 0 chr17 58078961 58078984 -37193667 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 1 1028 851 342 15 4 chr17 58078993 58079266 -37193385 + B4A SINE B4 11 286 -6 1 1028 500 325 51 32 chr17 58080657 58080873 -37191778 + RMER15 LTR ERVL 339 558 -17 1 1028 464 285 33 0 chr17 58082776 58082927 -37189724 + MER2 DNA MER2_type 98 253 -92 1 1028 586 332 75 52 chr17 58083284 58083677 -37188974 + MTD LTR MaLR 1 388 -31 1 1028 378 0 0 0 chr17 58083677 58083719 -37188932 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1028 317 279 112 24 chr17 58083719 58083737 -37188914 + MTD LTR MaLR 358 377 -2 1 1028 366 155 31 0 chr17 58083781 58083878 -37188773 + CT-rich Low_complexity Low_complexity 1 100 0 1 1028 576 303 208 16 chr17 58083939 58084251 -37188400 - ORR1E LTR MaLR 0 378 7 1 1028 309 326 35 42 chr17 58084987 58085131 -37187520 - MLT1A LTR MaLR -231 143 1 1 1028 369 56 0 0 chr17 58085568 58085622 -37187029 - L1_Mus2 LINE L1 0 6566 6513 1 1028 422 277 8 8 chr17 58085632 58085763 -37186888 - L1VL2 LINE L1 -6120 215 85 1 1028 230 211 19 19 chr17 58086419 58086525 -37186126 + (TG)n Simple_repeat Simple_repeat 2 107 0 1 1028 333 377 102 16 chr17 58086597 58086783 -37185868 - B4 SINE B4 -87 205 4 1 1028 689 308 19 9 chr17 58086956 58087169 -37185482 - ID_B1 SINE B4 -8 216 2 1 1028 396 232 0 0 chr17 58087209 58087308 -37185343 + (TATATG)n Simple_repeat Simple_repeat 4 102 0 1 1028 408 40 0 0 chr17 58087319 58087369 -37185282 + (GAAA)n Simple_repeat Simple_repeat 4 53 0 1 1028 595 350 15 5 chr17 58087398 58087593 -37185058 - ID_B1 SINE B4 -23 201 5 1 1028 291 400 19 57 chr17 58087662 58087821 -37184830 - RSINE1 SINE B4 -5 160 8 1 1028 3917 50 0 4 chr17 58088352 58088855 -37183796 - L1Md_F2 LINE L1 -246 6336 5836 1 1028 1430 126 0 17 chr17 58088855 58089089 -37183562 + L1Md_F2 LINE L1 6341 6570 -12 1 1028 660 103 0 0 chr17 58089768 58089884 -37182767 + (TC)n Simple_repeat Simple_repeat 1 116 0 1 1028 252 0 0 0 chr17 58089884 58089912 -37182739 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1028 366 341 42 42 chr17 58089915 58090059 -37182592 - RSINE1 SINE B4 -20 145 2 1 1028 563 344 40 35 chr17 58090056 58090084 -37182567 - B4A SINE B4 -61 231 210 1 1028 3240 39 21 0 chr17 58090084 58090472 -37182179 + MTA_Mm LTR MaLR 1 396 0 1 1028 563 344 40 35 chr17 58090472 58090669 -37181982 - B4A SINE B4 -83 209 5 1 1028 829 216 176 88 chr17 58091506 58091847 -37180804 + ORR1D1 LTR MaLR 3 373 -1 1 1028 593 319 0 0 chr17 58091969 58092104 -37180547 - RSINE1 SINE B4 -27 138 4 1 1028 180 77 0 0 chr17 58092128 58092154 -37180497 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1028 1147 204 12 12 chr17 58092176 58092429 -37180222 - Lx4B LINE L1 -54 7004 6752 1 1028 870 10 0 0 chr17 58092432 58092531 -37180120 + (TTC)n Simple_repeat Simple_repeat 2 100 0 1 1028 2179 169 86 19 chr17 58092533 58093105 -37179546 - Lx4B LINE L1 -1105 5953 5350 1 1028 1188 244 11 43 chr17 58093114 58093465 -37179186 - RLTR31_Mur LTR ERVK -213 340 1 1 1028 3416 216 17 50 chr17 58093466 58094468 -37178183 - RMER3D-int LTR ERVK -1 2841 1873 1 1028 14717 92 336 10 chr17 58094470 58098508 -37174143 + L1Md_F3 LINE L1 236 5586 -297 1 1028 8095 45 2 1 chr17 58098508 58099504 -37173147 + L1Md_F3 LINE L1 5587 6583 -1 1 1028 2079 76 7 0 chr17 58099504 58099794 -37172857 + L1Md_F2 LINE L1 5294 5585 -298 1 1028 7199 81 3 20 chr17 58099796 58100804 -37171847 + L1Md_F2 LINE L1 5588 6578 -4 1 1028 1324 236 123 35 chr17 58100822 58101620 -37171031 - RMER3D-int LTR ERVK -1057 1269 401 1 1028 2442 225 30 12 chr17 58101800 58102455 -37170196 - MYSERV6-int LTR ERVK -4344 4615 3976 1 1028 2252 336 34 34 chr17 58102441 58104247 -37168404 - MYSERV6-int LTR ERVK -4545 2005 200 1 1028 2879 102 27 0 chr17 58105168 58105579 -37167072 - BGLII_Mus LTR ERVK 0 422 1 1 1028 721 153 15 0 chr17 58105579 58105710 -37166941 - L1_Mur1 LINE L1 -3581 2296 2164 1 1028 2604 216 52 8 chr17 58105710 58106719 -37165932 - L1_Mur1 LINE L1 -3927 1950 890 1 1028 286 265 0 14 chr17 58107033 58107102 -37165549 + MT2A LTR ERVL 62 129 -404 1 1028 252 0 0 0 chr17 58107130 58107158 -37165493 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1028 35981 43 0 3 chr17 58107203 58113495 -37159156 - L1Md_T LINE L1 0 6585 218 1 1028 513 271 44 12 chr17 58113496 58113760 -37158891 + MT2A LTR ERVL 111 508 -76 1 1028 474 208 21 0 chr17 58113771 58113915 -37158736 + (TA)n Simple_repeat Simple_repeat 2 148 0 1 1028 285 29 0 0 chr17 58113918 58113952 -37158699 + (TCTA)n Simple_repeat Simple_repeat 3 36 0 1 1028 263 134 0 0 chr17 58113968 58114018 -37158633 + MT2A LTR ERVL 491 560 0 1 1028 242 304 17 0 chr17 58114168 58114243 -37158408 - PB1D10 SINE Alu -54 95 17 1 1028 545 299 37 81 chr17 58114522 58114820 -37157831 + B4 SINE B4 1 285 -7 1 1028 396 0 0 0 chr17 58114820 58114864 -37157787 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1028 1093 104 19 0 chr17 58115749 58116022 -37156629 + (TTCC)n Simple_repeat Simple_repeat 1 278 0 1 1028 965 286 68 34 chr17 58116894 58117216 -37155435 + MTEa LTR MaLR 46 378 -1 1 1028 238 227 0 0 chr17 58117447 58117491 -37155160 - MT2A LTR ERVL -281 320 277 1 1028 310 250 0 14 chr17 58117511 58117580 -37155071 - MT2A LTR ERVL -404 129 62 1 1028 3501 102 1 5 chr17 58117638 58118270 -37154381 - L1_Mus4 LINE L1 -695 5941 5314 1 1028 7881 107 11 2 chr17 58118269 58120321 -37152330 - L1VL4 LINE L1 -1469 2090 19 1 1028 1831 268 22 47 chr17 58120322 58120870 -37151781 + RMER13B LTR ERVK 371 904 -4 1 1028 231 36 0 0 chr17 58121323 58121351 -37151300 + (CTG)n Simple_repeat Simple_repeat 2 29 0 1 1028 457 312 47 34 chr17 58121947 58122096 -37150555 - ID_B1 SINE B4 -73 151 1 1 1028 632 234 63 29 chr17 58122117 58122324 -37150327 - B3 SINE B2 0 216 3 1 1028 400 133 108 32 chr17 58122339 58122432 -37150219 - L1Md_F2 LINE L1 -12 6570 6471 1 1028 183 42 0 0 chr17 58122556 58122580 -37150071 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1028 296 182 0 0 chr17 58122654 58122709 -37149942 - MTEa LTR MaLR -6 373 319 1 1028 1003 231 92 98 chr17 58122710 58123089 -37149562 - ORR1C2 LTR MaLR -7 377 1 1 1028 1182 275 67 9 chr17 58123089 58123394 -37149257 - MTEa LTR MaLR -56 323 1 1 1028 822 21 0 0 chr17 58124665 58124761 -37147890 + (GA)n Simple_repeat Simple_repeat 2 97 0 1 1028 285 178 67 0 chr17 58124973 58125063 -37147588 + (TAGA)n Simple_repeat Simple_repeat 2 97 0 1 1028 661 164 178 64 chr17 58125428 58125630 -37147021 - URR1A DNA MER1_type 0 226 2 1 1028 669 272 39 29 chr17 58126194 58126402 -37146249 + B3 SINE B2 1 210 -6 1 1028 287 368 53 0 chr17 58126440 58126535 -37146116 + B1F2 SINE Alu 3 102 -47 1 1028 9023 6 0 0 chr17 58126603 58127599 -37145052 + L1Md_T LINE L1 5587 6582 0 1 1028 277 218 116 32 chr17 58127611 58127712 -37144939 + B4A SINE B4 48 152 -72 1 1028 462 36 0 0 chr17 58127907 58127963 -37144688 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 1028 540 269 122 6 chr17 58127979 58128151 -37144500 - B3A SINE B2 -6 192 1 1 1028 204 310 219 8 chr17 58128158 58128320 -37144331 - MIRm SINE MIR -22 186 6 1 1028 6861 143 25 0 chr17 58128527 58129663 -37142988 - Lx2 LINE L1 0 6997 5833 1 1028 414 280 11 0 chr17 58129869 58129962 -37142689 - B3A SINE B2 -92 106 13 1 1028 233 282 16 141 chr17 58130044 58130162 -37142489 + MARNA DNA Mariner 287 388 -198 1 1028 565 267 70 37 chr17 58130162 58130376 -37142275 + B4 SINE B4 3 223 -69 1 1028 431 306 14 176 chr17 58130844 58130939 -37141712 + B4 SINE B4 16 96 -196 2 1028 478 305 32 48 chr17 58130939 58131125 -37141526 + B3A SINE B2 1 183 -15 2 1028 431 306 14 176 chr17 58131125 58131251 -37141400 + B4 SINE B4 97 201 -91 2 1028 424 219 0 0 chr17 58131537 58131610 -37141041 - B1_Mur1 SINE Alu -35 114 42 2 1028 469 335 5 69 chr17 58131647 58131836 -37140815 - B3A SINE B2 0 198 22 2 1028 248 231 0 0 chr17 58131971 58132023 -37140628 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 1028 913 267 123 15 chr17 58132066 58132408 -37140243 - MTEb LTR MaLR 0 379 1 2 1028 870 281 84 79 chr17 58133666 58134021 -37138630 + MTE2a LTR MaLR 1 357 -22 2 1028 313 250 76 43 chr17 58135740 58135832 -37136819 - MLT1A1 LTR MaLR -23 385 291 2 1028 540 0 0 0 chr17 58136581 58136641 -37136010 + (TC)n Simple_repeat Simple_repeat 1 60 0 2 1028 701 329 12 6 chr17 58136642 58136807 -37135844 - ID_B1 SINE B4 -26 198 33 2 1028 466 356 37 73 chr17 58137238 58137456 -37135195 - B4 SINE B4 -80 212 3 2 1028 203 105 26 26 chr17 58137908 58137947 -37134704 + A-rich Low_complexity Low_complexity 2 40 0 2 1028 514 113 21 0 chr17 58138881 58138978 -37133673 + (GAAA)n Simple_repeat Simple_repeat 2 100 0 2 1028 244 288 106 41 chr17 58141010 58141133 -37131518 - BGLII_B LTR ERVK -306 135 5 2 1028 1135 167 4 13 chr17 58141142 58141367 -37131284 + Lx5 LINE L1 5689 5911 -1139 2 1028 186 133 0 0 chr17 58141383 58141413 -37131238 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2 1028 3393 131 42 4 chr17 58141418 58141947 -37130704 - Lx2A1 LINE L1 -5 7003 6455 2 1028 564 268 104 129 chr17 58141951 58142238 -37130413 + MTE2a LTR MaLR 97 376 -3 2 1028 225 369 14 116 chr17 58143756 58143894 -37128757 - B4A SINE B4 -120 172 49 2 1028 483 18 0 0 chr17 58144531 58144587 -37128064 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 1028 34 0 0 0 chr17 58144980 58145014 -37127637 + AT_rich Low_complexity Low_complexity 1 34 0 2 1028 293 268 12 47 chr17 58145916 58146002 -37126649 + PB1D10 SINE Alu 35 117 0 2 1028 1162 269 57 54 chr17 58146958 58147311 -37125340 + ORR1E LTR MaLR 1 354 -5 2 1028 396 0 0 0 chr17 58147322 58147366 -37125285 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 1028 304 396 66 13 chr17 58147778 58147929 -37124722 - RSINE1 SINE B4 -4 161 3 2 1028 345 336 123 41 chr17 58147929 58148072 -37124579 - B4A SINE B4 -62 230 76 2 1028 1093 281 12 12 chr17 58148169 58148425 -37124226 + RMER13A LTR ERVK 605 860 0 2 1028 739 133 50 43 chr17 58148586 58148727 -37123924 - B2_Mm1t SINE B2 -51 142 1 2 1028 405 145 32 0 chr17 58148898 58148960 -37123691 - RMER15 LTR ERVL 0 575 512 2 1028 2466 190 56 6 chr17 58148962 58149459 -37123192 - RLTR28 LTR ERVL -2 522 1 2 1028 2474 208 39 24 chr17 58149459 58149966 -37122685 - RMER15 LTR ERVL -60 515 1 2 1028 993 65 0 0 chr17 58150716 58150854 -37121797 + (TC)n Simple_repeat Simple_repeat 1 138 0 2 1028 522 0 0 0 chr17 58150855 58150913 -37121738 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 1028 412 359 32 52 chr17 58151404 58151654 -37120997 - B4A SINE B4 -3 289 45 2 1028 2461 215 45 54 chr17 58151678 58152456 -37120195 - Lx9 LINE L1 -2 7642 6872 2 1028 197 318 30 15 chr17 58152636 58152703 -37119948 + MIRb SINE MIR 29 96 -172 2 1028 219 69 0 0 chr17 58153108 58153137 -37119514 + (TTTTG)n Simple_repeat Simple_repeat 4 32 0 2 1028 43 0 0 0 chr17 58153456 58153499 -37119152 + AT_rich Low_complexity Low_complexity 1 43 0 2 1028 495 0 0 0 chr17 58153499 58153554 -37119097 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1028 607 356 54 46 chr17 58153559 58153839 -37118812 - B4 SINE B4 -8 284 3 2 1028 534 240 0 0 chr17 58153864 58154014 -37118637 + (TA)n Simple_repeat Simple_repeat 2 151 0 2 1028 1181 208 0 0 chr17 58154434 58154660 -37117991 - URR1A DNA MER1_type 0 226 1 2 1028 905 231 95 133 chr17 58154855 58155245 -37117406 - MTE2a LTR MaLR -4 375 1 2 1028 234 0 0 0 chr17 58155521 58155547 -37117104 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1028 483 73 0 0 chr17 58155549 58155617 -37117034 + (GA)n Simple_repeat Simple_repeat 2 69 0 2 1028 374 296 168 90 chr17 58155939 58156195 -37116456 - B4 SINE B4 -14 278 3 2 1028 927 313 143 76 chr17 58156642 58156997 -37115654 - MTD LTR MaLR 0 419 3 2 1028 557 283 141 0 chr17 58157377 58157561 -37115090 - B3 SINE B2 -5 211 2 2 1028 297 0 0 0 chr17 58158024 58158057 -37114594 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1028 438 20 0 0 chr17 58158057 58158107 -37114544 + (GA)n Simple_repeat Simple_repeat 2 52 0 2 1028 3645 138 2 8 chr17 58158108 58158731 -37113920 + L1_Mm LINE L1 4740 5358 -525 2 1028 1556 96 35 0 chr17 58158731 58158961 -37113690 + L1_Mus3 LINE L1 6391 6628 -10 2 1028 20993 159 25 16 chr17 58159058 58161930 -37110721 + L1VL2 LINE L1 400 3306 -2577 2 1028 306 0 0 0 chr17 58161930 58161964 -37110687 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1028 20993 168 13 21 chr17 58161964 58164135 -37108516 + L1VL2 LINE L1 3307 5449 -434 2 1028 306 132 0 0 chr17 58164540 58164593 -37108058 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1028 331 345 110 28 chr17 58164643 58164824 -37107827 - B4A SINE B4 -14 278 83 2 1028 1447 200 62 50 chr17 58164824 58164912 -37107739 + RMER17C LTR ERVK 1 89 -321 2 1028 843 94 0 0 chr17 58164912 58165039 -37107612 + (TC)n Simple_repeat Simple_repeat 2 128 0 2 1028 1447 200 62 50 chr17 58165039 58165350 -37107301 + RMER17C LTR ERVK 90 405 -5 2 1028 845 120 47 40 chr17 58165441 58165589 -37107062 - L1_Mus2 LINE L1 -1 6565 6417 2 1028 289 303 0 0 chr17 58165621 58165687 -37106964 - B4A SINE B4 -198 94 29 2 1028 200 61 0 57 chr17 58165732 58165767 -37106884 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 2 1028 405 319 51 61 chr17 58166390 58166595 -37106056 + B4 SINE B4 1 211 -81 2 1028 420 104 0 0 chr17 58166645 58166712 -37105939 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 1028 501 315 18 35 chr17 58166937 58167108 -37105543 + ID_B1 SINE B4 57 224 0 2 1028 211 215 30 30 chr17 58167114 58167181 -37105470 + GA-rich Low_complexity Low_complexity 4 70 0 2 1028 253 232 10 20 chr17 58167182 58167283 -37105368 + (TGGA)n Simple_repeat Simple_repeat 2 101 0 2 1028 504 0 0 0 chr17 58169477 58169533 -37103118 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 1028 9052 73 5 11 chr17 58170358 58170919 -37101732 + Lx3_Mus LINE L1 5356 5909 -1100 2 1028 299 25 25 0 chr17 58170919 58170959 -37101692 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 2 1028 9052 94 39 5 chr17 58170959 58172006 -37100645 + Lx3_Mus LINE L1 5910 7008 -1 2 1028 774 215 91 30 chr17 58172046 58172312 -37100339 + Lx3C LINE L1 6696 7000 0 2 1028 552 296 45 31 chr17 58172472 58172695 -37099956 - RMER15 LTR ERVL -13 562 337 2 1028 754 317 38 76 chr17 58174492 58174755 -37097896 - B4A SINE B4 -4 288 36 2 1028 306 0 0 0 chr17 58174796 58174830 -37097821 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1028 26 0 0 0 chr17 58175611 58175637 -37097014 + AT_rich Low_complexity Low_complexity 1 26 0 2 1028 478 355 13 0 chr17 58175654 58175806 -37096845 - RSINE1 SINE B4 0 165 12 2 1028 818 285 52 42 chr17 58176207 58176414 -37096237 + B4 SINE B4 2 209 -83 2 1028 231 36 0 0 chr17 58176414 58176442 -37096209 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 2 1028 818 285 52 42 chr17 58176442 58176520 -37096131 + B4 SINE B4 210 290 -2 2 1028 577 331 7 7 chr17 58177495 58177650 -37095001 + RSINE1 SINE B4 3 157 -8 2 1028 414 0 0 0 chr17 58177661 58177707 -37094944 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 2 1028 24 53 0 0 chr17 58178281 58178319 -37094332 + AT_rich Low_complexity Low_complexity 1 38 0 2 1028 479 284 51 51 chr17 58178682 58178897 -37093754 - B4A SINE B4 -75 217 3 2 1028 438 108 0 0 chr17 58179240 58179305 -37093346 + (GGGAGA)n Simple_repeat Simple_repeat 5 69 0 2 1028 288 0 0 0 chr17 58179452 58179484 -37093167 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1028 396 0 0 0 chr17 58179484 58179527 -37093124 + (GA)n Simple_repeat Simple_repeat 2 45 0 2 1028 288 0 0 0 chr17 58180063 58180095 -37092556 + (CATA)n Simple_repeat Simple_repeat 2 33 0 2 1028 821 307 84 49 chr17 58180472 58180900 -37091751 + RLTR26 LTR ERVK 124 566 -76 2 1028 347 278 11 0 chr17 58181061 58181151 -37091500 + RSINE1 SINE B4 13 103 -62 2 1028 558 108 0 0 chr17 58181154 58181237 -37091414 + (CA)n Simple_repeat Simple_repeat 2 84 0 2 1028 225 0 0 0 chr17 58181495 58181520 -37091131 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 1028 201 140 35 17 chr17 58182239 58182297 -37090354 + (TATG)n Simple_repeat Simple_repeat 1 59 0 2 1028 803 272 86 113 chr17 58182318 58182691 -37089960 - MTE2a LTR MaLR -14 365 3 2 1028 474 41 27 14 chr17 58182769 58182843 -37089808 + (TG)n Simple_repeat Simple_repeat 2 76 0 2 1028 279 319 0 0 chr17 58182844 58182916 -37089735 - ID4_ SINE ID -10 73 2 2 1028 481 258 124 79 chr17 58183129 58183295 -37089356 + B3 SINE B2 2 174 -21 2 1028 194 0 39 0 chr17 58183295 58183321 -37089330 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1028 429 312 68 27 chr17 58183331 58183479 -37089172 + ID_B1 SINE B4 66 219 -5 2 1028 62 63 0 0 chr17 58183670 58183781 -37088870 + AT_rich Low_complexity Low_complexity 1 111 0 2 1028 229 351 53 26 chr17 58184454 58184530 -37088121 - ID4_ SINE ID -1 82 5 2 1028 479 279 13 13 chr17 58184777 58184926 -37087725 - MER115 DNA Tip100 -3 690 542 2 1028 534 337 98 5 chr17 58185692 58185886 -37086765 + B4 SINE B4 2 213 -79 2 1028 504 200 35 11 chr17 58185889 58186022 -37086629 - ORR1D1 LTR MaLR -14 405 264 2 1028 1333 257 67 24 chr17 58186227 58186610 -37086041 - MTD LTR MaLR -15 404 13 2 1028 1497 79 15 0 chr17 58187252 58187654 -37084997 + L1_Mus1 LINE L1 6361 6567 0 3 1028 6505 88 17 4 chr17 58187661 58188252 -37084399 + L1VL1 LINE L1 369 959 -5679 3 1028 5905 43 17 0 chr17 58188252 58188973 -37083678 + L1Md_F2 LINE L1 5850 6582 0 3 1028 28002 107 11 3 chr17 58188973 58193672 -37078979 + L1VL1 LINE L1 960 5699 -184 3 1028 6595 68 0 0 chr17 58193673 58194763 -37077888 - L1_Mus1 LINE L1 -119 6448 5358 3 1028 877 328 59 7 chr17 58195346 58195653 -37076998 - ORR1E LTR MaLR -34 325 3 3 1028 499 285 8 0 chr17 58195662 58195785 -37076866 + ID_B1 SINE B4 94 217 -7 3 1029 411 21 0 0 chr17 58196276 58196324 -37076327 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1029 350 285 98 27 chr17 58196517 58196701 -37075950 - L1MDa LINE L1 -3660 2877 2681 3 1029 665 226 7 0 chr17 58196732 58196869 -37075782 - B1_Mus2 SINE Alu -8 139 2 3 1029 228 262 0 0 chr17 58196990 58197051 -37075600 - L1MDa LINE L1 -3969 2568 2508 3 1029 510 253 156 49 chr17 58197151 58197459 -37075192 - L1MDa LINE L1 -4205 2428 2088 3 1029 336 48 0 0 chr17 58197868 58197910 -37074741 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1029 332 289 19 76 chr17 58198006 58198111 -37074540 - B3A SINE B2 -99 99 1 3 1029 256 333 137 31 chr17 58198389 58198550 -37074101 - B4 SINE B4 -12 280 103 3 1029 359 260 46 46 chr17 58198591 58198700 -37073951 - L1MDa LINE L1 -5287 1346 1238 3 1029 564 121 10 20 chr17 58198733 58198834 -37073817 - RMER17C LTR ERVK -8 402 303 3 1029 222 128 0 0 chr17 58199421 58199460 -37073191 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1029 414 94 0 0 chr17 58200747 58200811 -37071840 + (TC)n Simple_repeat Simple_repeat 1 64 0 3 1029 263 121 17 0 chr17 58201927 58201985 -37070666 + (CAGA)n Simple_repeat Simple_repeat 4 62 0 3 1029 343 354 33 11 chr17 58202382 58202562 -37070089 - MLT1A0 LTR MaLR 0 365 182 3 1029 293 277 10 135 chr17 58203132 58203188 -37069463 - PB1D10 SINE Alu -8 109 56 3 1029 574 25 0 37 chr17 58203188 58203270 -37069381 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 3 1029 1123 66 0 0 chr17 58203279 58203415 -37069236 - B1_Mus2 SINE Alu -9 138 3 3 1029 293 277 10 135 chr17 58203415 58203444 -37069207 - PB1D10 SINE Alu -62 55 26 3 1029 330 232 61 31 chr17 58203587 58203685 -37068966 + ID_B1 SINE B4 123 223 -1 3 1029 268 286 0 0 chr17 58203687 58203757 -37068894 + A-rich Low_complexity Low_complexity 2 71 0 3 1029 423 0 0 0 chr17 58203937 58203984 -37068667 + (GA)n Simple_repeat Simple_repeat 1 47 0 3 1029 436 311 15 29 chr17 58204723 58204859 -37067792 + RSINE1 SINE B4 3 136 -29 3 1029 370 306 130 100 chr17 58205141 58205410 -37067241 + B4 SINE B4 1 277 -15 3 1029 262 346 0 0 chr17 58205589 58205667 -37066984 + B4 SINE B4 203 280 -12 3 1029 189 107 0 0 chr17 58205731 58205759 -37066892 + (CAGA)n Simple_repeat Simple_repeat 1 28 0 3 1029 513 0 0 0 chr17 58205760 58205817 -37066834 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1029 367 310 25 25 chr17 58207088 58207207 -37065444 + B4A SINE B4 1 119 -173 3 1029 398 167 12 0 chr17 58207325 58207409 -37065242 + (TA)n Simple_repeat Simple_repeat 1 85 0 3 1029 1283 229 74 3 chr17 58207977 58208236 -37064415 - RMER19B LTR ERVK -224 678 401 3 1029 450 0 0 0 chr17 58208236 58208286 -37064365 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1029 1283 229 74 3 chr17 58208286 58208324 -37064327 - RMER19B LTR ERVK -502 400 362 3 1029 579 40 0 0 chr17 58208365 58208439 -37064212 + (CA)n Simple_repeat Simple_repeat 1 74 0 3 1029 253 0 0 51 chr17 58208729 58208768 -37063883 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 3 1029 242 0 61 0 chr17 58209288 58209321 -37063330 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1029 370 261 44 7 chr17 58209516 58209651 -37063000 + L1Md_F LINE L1 667 806 -5813 3 1029 19173 121 11 6 chr17 58209659 58212426 -37060225 + L1Md_F LINE L1 728 3344 -2542 3 1029 279 0 0 0 chr17 58212426 58212457 -37060194 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1029 19173 110 12 2 chr17 58212457 58213454 -37059197 + L1Md_F LINE L1 3345 4355 -1531 3 1029 14360 190 22 17 chr17 58213455 58214344 -37058307 - L1VL4 LINE L1 -1271 4615 3732 3 1029 1308 96 5 21 chr17 58214344 58214536 -37058115 - B2_Mm2 SINE B2 -6 189 1 3 1029 14360 187 21 19 chr17 58214536 58217703 -37054948 - L1VL4 LINE L1 -2155 3731 548 3 1029 411 383 56 26 chr17 58217849 58218117 -37054534 - B4A SINE B4 -16 276 1 3 1029 1546 311 53 19 chr17 58219193 58219884 -37052767 - Lx8 LINE L1 -349 7124 6410 3 1029 180 0 0 0 chr17 58221702 58221722 -37050929 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 1029 230 387 79 14 chr17 58221739 58221767 -37050884 + B4A SINE B4 30 56 -236 3 1029 528 16 0 0 chr17 58221767 58221828 -37050823 + (TC)n Simple_repeat Simple_repeat 1 61 0 3 1029 230 387 79 14 chr17 58221828 58221938 -37050713 + B4A SINE B4 57 176 -116 3 1029 234 0 0 0 chr17 58222053 58222079 -37050572 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 1029 366 80 0 0 chr17 58222079 58222129 -37050522 + (GA)n Simple_repeat Simple_repeat 2 51 0 3 1029 399 73 0 0 chr17 58222144 58222199 -37050452 + (CA)n Simple_repeat Simple_repeat 1 55 0 3 1029 464 341 108 70 chr17 58222463 58222750 -37049901 - RLTR26 LTR ERVK -226 416 119 3 1029 180 0 0 0 chr17 58223053 58223073 -37049578 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1029 1053 24 0 0 chr17 58223131 58223255 -37049396 + (GA)n Simple_repeat Simple_repeat 2 125 0 3 1029 249 57 0 0 chr17 58223816 58223851 -37048800 + (CAT)n Simple_repeat Simple_repeat 2 36 0 3 1029 864 182 0 0 chr17 58224665 58224802 -37047849 - B1_Mur3 SINE Alu -8 141 5 3 1029 411 303 84 7 chr17 58225565 58225708 -37046943 + RMER30 DNA MER1_type 18 171 -31 3 1029 381 288 67 92 chr17 58226092 58226287 -37046364 + B3A SINE B2 27 216 0 3 1029 3457 225 111 13 chr17 58226513 58226626 -37046025 - Lx9 LINE L1 -7 7637 7511 3 1029 489 17 0 0 chr17 58226626 58226684 -37045967 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 1029 3457 225 111 13 chr17 58226684 58227597 -37045054 - Lx9 LINE L1 -134 7510 6512 3 1029 1048 299 45 78 chr17 58227649 58228023 -37044628 + MTE2b LTR MaLR 18 379 0 3 1029 5331 77 1 6 chr17 58228197 58228912 -37043739 - Lx3_Mus LINE L1 0 7009 6298 3 1029 225 0 0 0 chr17 58229407 58229432 -37043219 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 1029 665 315 93 12 chr17 58229791 58230048 -37042603 - B4A SINE B4 0 292 15 3 1029 724 311 15 0 chr17 58230678 58230874 -37041777 - ID_B1 SINE B4 -20 204 6 3 1029 21 0 0 0 chr17 58231330 58231351 -37041300 + AT_rich Low_complexity Low_complexity 1 21 0 3 1029 21 0 0 0 chr17 58231605 58231626 -37041025 + AT_rich Low_complexity Low_complexity 1 21 0 3 1029 233 359 14 20 chr17 58231932 58232080 -37040571 + CT-rich Low_complexity Low_complexity 5 151 0 3 1029 350 250 0 0 chr17 58232918 58232990 -37039661 - RMER15 LTR ERVL -112 463 392 3 1029 249 262 16 0 chr17 58233032 58233093 -37039558 - Lx8 LINE L1 -309 7164 7103 3 1029 213 371 44 29 chr17 58233871 58234007 -37038644 + B4 SINE B4 2 139 -153 3 1029 267 254 25 58 chr17 58234009 58234130 -37038521 + (CAGAGA)n Simple_repeat Simple_repeat 3 119 0 3 1029 358 359 97 0 chr17 58234143 58234288 -37038363 + B4A SINE B4 127 285 -7 3 1029 2948 36 6 0 chr17 58234660 58235016 -37037635 + L1Md_F2 LINE L1 6224 6581 -1 3 1029 12379 52 0 0 chr17 58235078 58236744 -37035907 - L1_Mm LINE L1 -2748 3135 1470 3 1029 2879 38 0 0 chr17 58236755 58237140 -37035511 + L1Md_T LINE L1 6225 6582 0 3 1029 207 0 0 0 chr17 58237271 58237294 -37035357 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 3 1029 440 303 69 0 chr17 58237514 58237659 -37034992 + B4 SINE B4 75 229 -63 3 1029 515 229 159 32 chr17 58237659 58237848 -37034803 + B3 SINE B2 1 213 -3 3 1029 306 0 0 0 chr17 58237911 58237945 -37034706 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1029 464 152 0 29 chr17 58238150 58238270 -37034381 + (TA)n Simple_repeat Simple_repeat 2 117 0 3 1029 441 0 0 0 chr17 58238270 58238319 -37034332 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1029 2242 57 11 0 chr17 58238322 58238605 -37034046 + L1Md_F2 LINE L1 6280 6565 -17 3 1029 464 152 0 29 chr17 58238605 58238616 -37034035 + (TA)n Simple_repeat Simple_repeat 1 11 0 3 1029 371 325 54 102 chr17 58239023 58239465 -37033186 - Lx8 LINE L1 -2 7471 7051 3 1029 422 318 67 22 chr17 58240255 58240390 -37032261 + RSINE1 SINE B4 13 153 -12 3 1029 789 285 19 147 chr17 58240626 58241054 -37031597 + MTE2b LTR MaLR 5 377 -2 3 1029 237 296 0 0 chr17 58241092 58241146 -37031505 + ID4 SINE ID 12 65 -18 3 1029 414 0 0 0 chr17 58241690 58241736 -37030915 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1029 189 0 0 0 chr17 58241797 58241818 -37030833 + (CATG)n Simple_repeat Simple_repeat 2 22 0 3 1029 369 0 0 0 chr17 58243298 58243339 -37029312 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1029 590 284 92 64 chr17 58243351 58243569 -37029082 + B4A SINE B4 25 248 -44 3 1029 507 144 0 0 chr17 58243719 58243816 -37028835 + (CA)n Simple_repeat Simple_repeat 2 98 0 3 1029 520 314 9 138 chr17 58247084 58247417 -37025234 + B4A SINE B4 3 292 0 3 1029 407 335 82 0 chr17 58248449 58248607 -37024044 + B3A SINE B2 10 180 -18 3 1029 677 202 128 123 chr17 58248762 58249168 -37023483 + RMER17C LTR ERVK 3 410 0 3 1029 1535 255 43 112 chr17 58249168 58249894 -37022757 + RMER17C-int LTR ERVK 1 662 -2576 3 1029 531 45 0 0 chr17 58249894 58249960 -37022691 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 3 1029 1535 255 43 112 chr17 58249960 58250046 -37022605 + RMER17C-int LTR ERVK 663 756 -2482 3 1029 485 231 39 45 chr17 58250183 58250337 -37022314 - RLTR43A LTR ERVK 0 364 212 3 1029 284 130 90 13 chr17 58250721 58250799 -37021852 + RMER17C-int LTR ERVK 1282 1365 -1873 3 1029 7866 144 66 75 chr17 58250818 58251934 -37020717 + RMER17C-int LTR ERVK 1491 2606 -632 3 1029 236 219 0 0 chr17 58251934 58251975 -37020676 - LSU-rRNA_Hsa rRNA rRNA -793 4242 4202 3 1029 7866 144 66 75 chr17 58251975 58252239 -37020412 + RMER17C-int LTR ERVK 2607 2872 -366 3 1029 210 37 0 0 chr17 58252239 58252266 -37020385 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1029 7866 144 66 75 chr17 58252266 58252607 -37020044 + RMER17C-int LTR ERVK 2873 3237 -1 3 1029 690 222 90 110 chr17 58252607 58252855 -37019796 + RMER17C LTR ERVK 1 244 -166 3 1029 189 74 0 0 chr17 58252855 58252882 -37019769 + (TCTG)n Simple_repeat Simple_repeat 4 30 0 3 1029 1621 180 40 51 chr17 58252882 58253329 -37019322 - RMER17C LTR ERVK -519 439 16 3 1029 207 0 0 0 chr17 58254131 58254154 -37018497 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 3 1029 613 349 35 18 chr17 58254255 58254538 -37018113 - B4A SINE B4 -4 288 1 3 1029 220 365 14 0 chr17 58254763 58254837 -37017814 - MIRc SINE MIR -118 150 76 3 1029 515 293 138 72 chr17 58255239 58255598 -37017053 + ORR1E LTR MaLR 3 370 0 4 1029 1152 64 0 0 chr17 58255654 58255795 -37016856 + B1_Mus1 SINE Alu 2 142 -6 4 1029 316 327 78 20 chr17 58255834 58255987 -37016664 + MER3 DNA MER1_type 4 165 -44 4 1029 543 31 0 0 chr17 58256331 58256396 -37016255 + (TG)n Simple_repeat Simple_repeat 1 65 0 4 1029 947 296 78 25 chr17 58257238 58257598 -37015053 + MTEa LTR MaLR 1 379 0 4 1029 856 211 80 0 chr17 58258354 58258567 -37014084 + Lx2A1 LINE L1 6779 7008 0 4 1029 204 40 0 0 chr17 58258661 58258686 -37013965 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1029 288 0 0 0 chr17 58258769 58258801 -37013850 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1029 6089 157 22 7 chr17 58258920 58260198 -37012453 - Lx LINE L1 -1 6653 5361 4 1029 297 0 0 0 chr17 58260198 58260231 -37012420 + (TTAA)n Simple_repeat Simple_repeat 4 36 0 4 1029 3200 127 22 8 chr17 58260232 58260733 -37011918 - Lx3_Mus LINE L1 -17 6992 6485 4 1029 13270 118 38 15 chr17 58260733 58264142 -37008509 - Lx LINE L1 -523 5360 777 4 1029 1333 230 12 75 chr17 58264177 58264576 -37008075 + ORR1D1 LTR MaLR 1 374 0 4 1029 246 358 45 9 chr17 58264592 58264702 -37007949 + RMER12 LTR ERVK 703 816 -506 4 1029 404 320 79 43 chr17 58266015 58266293 -37006358 + B4A SINE B4 5 292 0 4 1029 576 265 58 40 chr17 58266433 58266606 -37006045 + B4 SINE B4 8 183 -109 4 1029 29 0 0 0 chr17 58266629 58266658 -37005993 + AT_rich Low_complexity Low_complexity 1 29 0 4 1029 401 274 5 58 chr17 58266741 58266931 -37005720 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 4 1029 471 35 0 0 chr17 58267929 58267986 -37004665 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 4 1029 7325 183 10 18 chr17 58267988 58269438 -37003213 - Lx4A LINE L1 -29 7029 5591 4 1029 1613 37 41 23 chr17 58269438 58269657 -37002994 - L1Md_F3 LINE L1 0 6584 6362 4 1029 1338 48 0 0 chr17 58269657 58269824 -37002827 + L1Md_F3 LINE L1 6205 6371 -211 4 1029 1219 117 58 38 chr17 58269818 58270058 -37002593 - Lx4A LINE L1 -283 5594 5350 4 1029 2877 124 97 2 chr17 58270069 58270531 -37002120 - Lx3_Mus LINE L1 -8 7001 6496 4 1029 352 56 0 0 chr17 58270531 58270585 -37002066 + L1_Mur1 LINE L1 4611 4664 -1222 4 1029 2031 106 57 27 chr17 58270585 58270916 -37001735 - L1_Mus3 LINE L1 -1 6637 6297 4 1029 5799 160 19 58 chr17 58270917 58272896 -36999755 - L1_Mur2 LINE L1 -3390 2487 592 4 1029 370 65 43 69 chr17 58273157 58273273 -36999378 + A-rich Low_complexity Low_complexity 1 113 0 4 1029 218 359 16 0 chr17 58273464 58273528 -36999123 - B1_Mus1 SINE Alu -82 66 2 4 1029 261 317 0 79 chr17 58274112 58274201 -36998450 - B4A SINE B4 -199 93 12 4 1029 599 181 103 0 chr17 58274707 58274823 -36997828 + B2_Mm2 SINE B2 1 128 -67 4 1029 344 59 20 0 chr17 58274843 58274894 -36997757 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 1029 667 330 57 35 chr17 58275093 58275376 -36997275 - B4 SINE B4 -2 290 2 4 1029 605 252 0 31 chr17 58275821 58275948 -36996703 + RSINE1 SINE B4 25 147 -18 4 1029 28 29 0 0 chr17 58275979 58276014 -36996637 + AT_rich Low_complexity Low_complexity 1 35 0 4 1029 570 250 7 41 chr17 58276180 58276326 -36996325 + B3 SINE B2 75 215 -1 4 1029 2374 205 57 95 chr17 58276526 58277577 -36995074 + RMER21A LTR ERV1 1 941 -6 4 1029 1049 280 19 64 chr17 58278513 58278887 -36993764 - ORR1E LTR MaLR -2 357 1 4 1029 401 354 8 0 chr17 58279416 58279653 -36992998 - L1MA5A LINE L1 -445 5852 5614 4 1029 253 211 19 0 chr17 58279854 58279906 -36992745 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1029 686 274 82 37 chr17 58279913 58280182 -36992469 - B4A SINE B4 -6 286 6 4 1029 305 330 54 81 chr17 58281114 58281419 -36991232 - B4 SINE B4 -18 274 2 4 1029 698 328 135 12 chr17 58281459 58281718 -36990933 + B4 SINE B4 2 292 0 4 1029 524 228 0 0 chr17 58282648 58282749 -36989902 + B1_Mur4 SINE Alu 43 143 -7 4 1029 413 50 17 0 chr17 58282808 58282868 -36989783 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 1029 275 280 13 39 chr17 58282877 58282955 -36989696 - RSINE1 SINE B4 -41 124 49 4 1029 547 298 67 39 chr17 58283185 58283441 -36989210 + B4A SINE B4 1 292 0 4 1029 411 145 0 0 chr17 58283448 58283517 -36989134 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 1029 191 192 39 0 chr17 58283599 58283651 -36989000 + CT-rich Low_complexity Low_complexity 1 54 0 4 1029 283 311 24 24 chr17 58284678 58284843 -36987808 + (TATG)n Simple_repeat Simple_repeat 3 167 0 4 1029 285 399 6 6 chr17 58284771 58284950 -36987701 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 1029 248 264 0 8 chr17 58284974 58285100 -36987551 + (TG)n Simple_repeat Simple_repeat 2 126 0 4 1029 800 261 131 42 chr17 58285114 58285137 -36987514 - B4 SINE B4 0 292 273 4 1029 474 49 0 0 chr17 58285137 58285198 -36987453 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 1029 800 261 131 42 chr17 58285198 58285250 -36987401 - B4 SINE B4 -20 272 215 4 1029 666 0 0 0 chr17 58285250 58285324 -36987327 + (TTTTG)n Simple_repeat Simple_repeat 2 75 0 4 1029 800 261 131 42 chr17 58285324 58285507 -36987144 - B4 SINE B4 -78 214 10 4 1029 307 327 9 9 chr17 58285628 58285739 -36986912 - MLT2D LTR ERVL -301 113 3 4 1029 695 333 65 5 chr17 58285961 58286178 -36986473 + B4 SINE B4 5 234 -58 4 1029 414 0 0 0 chr17 58286206 58286252 -36986399 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1029 2168 196 43 71 chr17 58286701 58287235 -36985416 + RLTR28 LTR ERVL 1 519 -5 4 1029 4789 74 0 0 chr17 58287502 58288111 -36984540 - L1_Mus1 LINE L1 0 6567 5959 4 1029 284 228 64 93 chr17 58288585 58288725 -36983926 - L1MC LINE L1 -2180 5702 5567 4 1029 555 66 0 0 chr17 58288955 58289031 -36983620 + (TC)n Simple_repeat Simple_repeat 1 76 0 4 1029 233 75 25 0 chr17 58289035 58289075 -36983576 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1029 778 309 61 11 chr17 58290098 58290360 -36982291 + MTEa LTR MaLR 96 370 -9 4 1029 285 29 0 0 chr17 58290577 58290611 -36982040 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1029 321 157 5 18 chr17 58291750 58291814 -36980837 - MT2A LTR ERVL -534 67 3 4 1029 7575 43 7 8 chr17 58292126 58293544 -36979107 - L1Md_F2 LINE L1 -8 6574 5165 4 1029 456 318 64 57 chr17 58293748 58294031 -36978620 + B4 SINE B4 3 287 -5 4 1029 269 234 114 61 chr17 58294292 58294424 -36978227 + YREP_Mm Unknown Unknown 156 294 -1518 4 1029 893 264 23 5 chr17 58294306 58294523 -36978128 - ID_B1 SINE B4 -1 223 3 4 1029 6405 47 5 0 chr17 58294652 58295427 -36977224 - L1_Mus1 LINE L1 0 6567 5789 4 1029 575 245 41 41 chr17 58295556 58295701 -36976950 + B4 SINE B4 77 221 -71 4 1029 944 90 60 0 chr17 58295573 58295706 -36976945 + B1_Mus1 SINE Alu 8 148 0 4 1029 395 299 39 8 chr17 58295835 58295963 -36976688 - B4 SINE B4 -79 213 82 4 1029 24 0 0 0 chr17 58296337 58296361 -36976290 + AT_rich Low_complexity Low_complexity 1 24 0 4 1029 621 368 72 29 chr17 58296565 58296842 -36975809 - B4 SINE B4 -2 290 2 4 1029 496 338 21 0 chr17 58297281 58297423 -36975228 - B3A SINE B2 -51 147 3 4 1029 501 176 50 0 chr17 58298420 58298539 -36974112 - Lx9 LINE L1 -2 7642 7518 4 1029 764 347 4 12 chr17 58298638 58298883 -36973768 + B4A SINE B4 1 243 -49 4 1029 383 338 44 7 chr17 58298861 58298998 -36973653 + RSINE1 SINE B4 10 151 -14 4 1029 327 49 0 0 chr17 58299072 58299113 -36973538 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1029 21 0 0 0 chr17 58299922 58299943 -36972708 + AT_rich Low_complexity Low_complexity 1 21 0 4 1029 377 290 329 0 chr17 58300198 58300405 -36972246 - B4A SINE B4 -16 276 2 4 1029 215 427 0 37 chr17 58301085 58301192 -36971459 - B1_Mur1 SINE Alu -10 139 37 4 1029 192 40 0 0 chr17 58301252 58301277 -36971374 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 1029 600 286 7 13 chr17 58301280 58301429 -36971222 + MTE2a LTR MaLR 232 379 0 4 1029 887 321 92 16 chr17 58302231 58302611 -36970040 - RMER5 LTR ERV1 -9 525 117 4 1029 618 14 0 0 chr17 58302736 58302807 -36969844 + (GA)n Simple_repeat Simple_repeat 1 71 0 4 1029 1057 88 6 6 chr17 58302807 58302967 -36969684 + (GAA)n Simple_repeat Simple_repeat 3 162 0 4 1029 231 209 0 0 chr17 58303835 58303878 -36968773 + (TATATG)n Simple_repeat Simple_repeat 3 45 0 4 1029 584 240 0 6 chr17 58303880 58304060 -36968591 + (TA)n Simple_repeat Simple_repeat 2 180 0 4 1029 1138 83 12 0 chr17 58304874 58305042 -36967609 + (GA)n Simple_repeat Simple_repeat 1 170 0 4 1029 252 337 76 0 chr17 58305097 58305189 -36967462 - LTR31 LTR ERV1 -269 350 252 4 1029 715 318 76 29 chr17 58306580 58306855 -36965796 + B4 SINE B4 1 288 -4 4 1029 401 340 71 50 chr17 58307193 58307391 -36965260 + B4A SINE B4 1 202 -90 4 1029 722 82 63 0 chr17 58307497 58307656 -36964995 + (GA)n Simple_repeat Simple_repeat 2 170 0 4 1029 3153 169 11 14 chr17 58308244 58308807 -36963844 - Lx LINE L1 -1 6653 6093 4 1029 242 329 29 0 chr17 58309019 58309089 -36963562 - RSINE1 SINE B4 -35 130 59 4 1029 33859 35 0 0 chr17 58310525 58315992 -36956659 + L1Md_T LINE L1 26 5589 -297 4 1029 9014 6 0 0 chr17 58315992 58316988 -36955663 + L1Md_T LINE L1 5590 6585 0 4 1029 44 63 0 0 chr17 58316988 58317067 -36955584 + AT_rich Low_complexity Low_complexity 1 79 0 4 1029 483 18 0 0 chr17 58317068 58317124 -36955527 + (TC)n Simple_repeat Simple_repeat 2 57 0 4 1029 500 307 125 66 chr17 58317124 58317314 -36955337 - B4 SINE B4 -3 289 83 4 1029 207 0 0 0 chr17 58317314 58317337 -36955314 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1029 500 307 125 66 chr17 58317337 58317418 -36955233 - B4 SINE B4 -210 82 3 4 1029 572 287 89 35 chr17 58317911 58318113 -36954538 - B4A SINE B4 -79 213 1 4 1029 199 340 32 0 chr17 58318470 58318564 -36954087 + MIRb SINE MIR 108 204 -64 5 1029 1248 299 22 17 chr17 58318703 58319067 -36953584 + MTE2b LTR MaLR 1 391 -28 5 1029 317 58 0 19 chr17 58319824 58319877 -36952774 + L1Md_F3 LINE L1 6519 6570 -14 5 1029 962 280 39 11 chr17 58320050 58320310 -36952341 + MTE2b LTR MaLR 3 269 -110 5 1029 2166 80 0 65 chr17 58320825 58321161 -36951490 + L1Md_F2 LINE L1 6269 6582 0 5 1029 534 314 63 11 chr17 58321920 58322208 -36950443 + MTEa LTR MaLR 48 378 -1 5 1029 229 326 86 23 chr17 58322408 58322594 -36950057 + MIRb SINE MIR 40 233 -35 5 1029 476 16 16 0 chr17 58322739 58322800 -36949851 + (TC)n Simple_repeat Simple_repeat 1 62 0 5 1029 384 22 0 0 chr17 58322800 58322845 -36949806 + (TATG)n Simple_repeat Simple_repeat 1 45 0 5 1029 185 130 0 42 chr17 58322846 58322894 -36949757 + (TCTG)n Simple_repeat Simple_repeat 4 49 0 5 1029 496 321 163 31 chr17 58323014 58323271 -36949380 - B4A SINE B4 -1 291 1 5 1029 566 41 14 0 chr17 58323311 58323384 -36949267 + B1_Mus2 SINE Alu 74 147 0 5 1029 231 203 0 0 chr17 58323384 58323443 -36949208 + A-rich Low_complexity Low_complexity 1 59 0 5 1029 887 134 0 0 chr17 58323679 58323813 -36948838 + URR1B DNA MER1_type 92 225 0 5 1029 457 86 0 0 chr17 58323865 58323935 -36948716 - L1_Mus1 LINE L1 0 6567 6498 5 1029 260 331 41 83 chr17 58323957 58324102 -36948549 - MTEa LTR MaLR -236 143 5 5 1029 1356 255 22 31 chr17 58324560 58324972 -36947679 + MTE2a LTR MaLR 3 379 0 5 1029 297 278 202 81 chr17 58325043 58325357 -36947294 - RLTR22_Mus LTR ERVK -2 1806 1530 5 1029 2181 233 68 85 chr17 58325363 58326185 -36946466 - RLTR22_Mur LTR ERVK -1038 810 3 5 1029 21 0 0 0 chr17 58326206 58326227 -36946424 + AT_rich Low_complexity Low_complexity 1 21 0 5 1029 460 396 24 35 chr17 58326447 58326735 -36945916 + B4A SINE B4 8 292 0 5 128 718 340 35 0 chr17 58326989 58327192 -36945459 - ID_B1 SINE B4 -7 217 8 5 1030 288 278 148 44 chr17 58327874 58328239 -36944412 - L1M2 LINE L1 -2805 3338 2936 5 1030 1880 152 6 58 chr17 58328300 58328642 -36944009 - ORR1A3 LTR MaLR -2 324 1 5 1030 192 228 0 0 chr17 58328779 58328836 -36943815 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1030 1007 331 18 20 chr17 58329767 58330109 -36942542 - MTE2a LTR MaLR -38 341 1 5 1030 5846 35 0 0 chr17 58330846 58331589 -36941062 - L1Md_T LINE L1 -1054 4829 4087 5 1030 6383 19 1 0 chr17 58331584 58332357 -36940294 + L1Md_T LINE L1 4813 5586 -297 5 1030 8478 27 1 13 chr17 58332357 58333364 -36939287 + L1Md_T LINE L1 5587 6581 -1 5 1030 24 0 0 0 chr17 58333365 58333389 -36939262 + AT_rich Low_complexity Low_complexity 1 24 0 5 1030 21 0 0 0 chr17 58333596 58333617 -36939034 + AT_rich Low_complexity Low_complexity 1 21 0 5 1030 956 199 221 14 chr17 58333820 58334096 -36938555 + MTC LTR MaLR 89 421 0 5 1030 314 319 63 37 chr17 58334959 58335148 -36937503 - B3A SINE B2 -4 194 1 5 1030 321 152 54 0 chr17 58335151 58335223 -36937428 - MT2A LTR ERVL -400 75 1 5 1030 475 255 59 100 chr17 58335382 58335552 -36937099 - B3A SINE B2 -31 164 2 5 1030 279 300 54 22 chr17 58335556 58335648 -36937003 - B4 SINE B4 -69 223 129 5 1030 313 248 61 23 chr17 58335804 58335936 -36936715 + MER2 DNA MER2_type 82 218 -127 5 1030 4490 127 10 0 chr17 58335942 58336753 -36935898 + L1VL2 LINE L1 284 1104 -2511 5 1030 6474 127 13 14 chr17 58336746 58337867 -36934784 + Lx LINE L1 5528 6648 -6 5 1030 241 359 11 0 chr17 58337871 58337963 -36934688 + MER2 DNA MER2_type 223 315 -30 5 1030 306 319 67 31 chr17 58338524 58338697 -36933954 + MTD LTR MaLR 1 190 -217 5 1030 201 108 0 0 chr17 58338697 58338734 -36933917 + (A)n Simple_repeat Simple_repeat 1 37 0 5 1030 198 0 0 0 chr17 58338766 58338788 -36933863 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 5 1030 740 238 174 5 chr17 58338801 58338991 -36933660 + MTD LTR MaLR 198 419 0 5 1030 629 304 9 43 chr17 58339469 58339699 -36932952 - ID_B1 SINE B4 -1 223 2 5 1030 189 0 0 0 chr17 58339715 58339736 -36932915 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 5 1030 405 299 49 117 chr17 58339802 58340025 -36932626 - MTEb LTR MaLR 0 379 172 5 1030 26 50 0 0 chr17 58340216 58340256 -36932395 + AT_rich Low_complexity Low_complexity 1 40 0 5 1030 658 282 29 47 chr17 58340427 58340706 -36931945 - Tigger15a DNA TcMar -17 698 425 5 1030 281 169 17 0 chr17 58340947 58341006 -36931645 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 1030 267 348 46 87 chr17 58341029 58341202 -36931449 - B3 SINE B2 -50 166 1 5 1030 465 292 0 83 chr17 58341471 58341639 -36931012 - Tigger15a DNA TcMar -16 699 546 5 1030 614 329 47 23 chr17 58341743 58342387 -36930264 - Lx8 LINE L1 -2 7471 6730 5 1030 324 0 0 0 chr17 58342660 58342696 -36929955 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 1030 510 17 0 0 chr17 58342696 58342754 -36929897 + (GA)n Simple_repeat Simple_repeat 1 59 0 5 1030 200 189 14 0 chr17 58343033 58343107 -36929544 + CT-rich Low_complexity Low_complexity 2 76 0 5 1030 4547 65 32 2 chr17 58344107 58344708 -36927943 - L1Md_F2 LINE L1 -2 6580 5962 5 1030 407 340 38 76 chr17 58345475 58345765 -36926886 - ORR1E LTR MaLR -2 357 79 5 1030 351 0 0 0 chr17 58345995 58346034 -36926617 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1030 697 307 10 146 chr17 58346057 58346358 -36926293 - B4 SINE B4 0 292 33 5 1030 336 277 51 14 chr17 58346338 58346481 -36926170 - B4A SINE B4 -139 153 2 5 1030 271 291 32 64 chr17 58346684 58346809 -36925842 + MamRep434 DNA TcMar 12 132 -294 5 1030 255 140 0 0 chr17 58347083 58347133 -36925518 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1030 441 0 0 0 chr17 58347133 58347182 -36925469 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 1030 1176 75 0 0 chr17 58347303 58347450 -36925201 + B1_Mus2 SINE Alu 1 147 0 5 1030 241 103 34 17 chr17 58347450 58347509 -36925142 + A-rich Low_complexity Low_complexity 1 60 0 5 1030 195 349 0 0 chr17 58347898 58347961 -36924690 - L2b LINE L2 -5 3370 3308 5 1030 225 83 0 0 chr17 58347983 58348019 -36924632 + (A)n Simple_repeat Simple_repeat 1 36 0 5 1030 405 264 1 2 chr17 58349156 58349293 -36923358 + L1M2 LINE L1 5672 5807 -364 5 1030 4391 82 0 0 chr17 58350021 58350654 -36921997 - L1Md_F2 LINE L1 -1147 4736 4104 5 1030 6319 65 0 0 chr17 58350668 58351510 -36921141 + L1Md_F2 LINE L1 4745 5586 -297 5 1030 7994 45 8 1 chr17 58351511 58352499 -36920152 + L1Md_F2 LINE L1 5588 6582 0 5 1030 34229 52 14 4 chr17 58352560 58357791 -36914860 + L1Md_F2 LINE L1 302 5586 -297 5 1030 7837 57 5 2 chr17 58357791 58358784 -36913867 + L1Md_F2 LINE L1 5587 6582 0 5 1030 325 319 0 0 chr17 58358841 58358910 -36913741 + ID4 SINE ID 14 82 -1 5 1030 22 0 0 0 chr17 58358916 58358938 -36913713 + AT_rich Low_complexity Low_complexity 1 22 0 5 1030 530 325 74 108 chr17 58358958 58359338 -36913313 - MTEa LTR MaLR 0 379 13 5 1030 3604 231 34 27 chr17 58359583 58359826 -36912825 + Lx7 LINE L1 6073 6329 -1367 5 1030 962 112 0 71 chr17 58359826 58359980 -36912671 + B1_Mm SINE Alu 1 143 -4 5 1030 477 0 0 0 chr17 58359981 58360034 -36912617 + (TAA)n Simple_repeat Simple_repeat 2 54 0 5 1030 3604 231 34 27 chr17 58360034 58360711 -36911940 + Lx7 LINE L1 6330 7001 -695 5 1030 1136 230 72 0 chr17 58360711 58360976 -36911675 - ORR1C1 LTR MaLR -10 368 85 5 1030 2241 39 14 0 chr17 58360989 58361270 -36911381 - ORR1A0 LTR MaLR 0 346 62 5 1030 1303 13 0 0 chr17 58361269 58361421 -36911230 - ORR1A0-int LTR MaLR -127 1665 1514 5 1030 368 43 0 0 chr17 58361417 58361464 -36911187 - ORR1A0 LTR MaLR -299 47 1 5 1030 3612 238 51 24 chr17 58361510 58362498 -36910153 - ORR1A0-int LTR MaLR -4 1505 497 5 1030 411 21 0 0 chr17 58363081 58363129 -36909522 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1030 612 176 0 0 chr17 58363182 58363318 -36909333 + GA-rich Low_complexity Low_complexity 1 136 0 5 1030 1476 233 20 32 chr17 58363503 58363911 -36908740 - MTB_Mm LTR MaLR -4 403 1 5 1030 1409 57 0 3 chr17 58365196 58365496 -36907155 + (TTTC)n Simple_repeat Simple_repeat 1 299 0 5 1030 201 182 0 0 chr17 58365496 58365551 -36907100 + T-rich Low_complexity Low_complexity 1 55 0 5 1030 1048 95 0 58 chr17 58365558 58365714 -36906937 - B1_Mus1 SINE Alu -1 147 1 5 1030 435 300 10 10 chr17 58366064 58366165 -36906486 + B3A SINE B2 1 101 -97 5 1030 698 262 128 30 chr17 58366385 58366683 -36905968 - MTE2b LTR MaLR -5 374 61 5 1030 249 299 49 35 chr17 58366827 58366969 -36905682 + L2a LINE L2 2457 2600 -819 5 1030 33912 67 2 15 chr17 58367006 58373079 -36899572 - L1Md_F2 LINE L1 -9 6576 563 5 1030 303 301 34 34 chr17 58373675 58373792 -36898859 - B4A SINE B4 -173 119 3 5 1030 420 327 96 0 chr17 58373909 58374117 -36898534 - L1M4 LINE L1 -651 5523 5296 5 1030 1535 225 43 89 chr17 58374130 58374618 -36898033 - RLTR1B LTR ERV1 0 512 3 5 1030 441 0 0 0 chr17 58374643 58374692 -36897959 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1030 329 278 104 15 chr17 58374715 58374850 -36897801 - L1M2 LINE L1 -900 5243 5097 5 1030 214 384 29 22 chr17 58374917 58375053 -36897598 + L2a LINE L2 3097 3233 -193 5 1030 661 172 7 7 chr17 58375744 58375896 -36896755 + (TG)n Simple_repeat Simple_repeat 1 152 0 5 1030 1434 199 50 47 chr17 58375920 58376360 -36896291 - RMER17C LTR ERVK -519 439 16 5 1030 469 368 53 53 chr17 58376366 58376630 -36896021 - B4A SINE B4 -25 267 4 5 1030 1209 227 135 25 chr17 58377448 58377777 -36894874 + ORR1E LTR MaLR 1 419 0 5 1030 339 275 224 30 chr17 58377908 58378152 -36894499 - L1M4 LINE L1 -3390 3254 2957 5 1030 492 128 0 0 chr17 58378152 58378230 -36894421 + (TG)n Simple_repeat Simple_repeat 2 79 0 5 1030 339 275 224 30 chr17 58378230 58378315 -36894336 - L1M4 LINE L1 -3688 2956 2862 5 1030 509 85 85 0 chr17 58378320 58378414 -36894237 - L1Md_F3 LINE L1 0 6584 6483 5 1030 7588 105 6 4 chr17 58378414 58379565 -36893086 - Lx3_Mus LINE L1 -61 6948 5796 5 1030 207 262 32 65 chr17 58379788 58379943 -36892708 + T-rich Low_complexity Low_complexity 4 153 0 5 1030 477 0 0 0 chr17 58380515 58380568 -36892083 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1030 317 339 113 28 chr17 58380657 58380948 -36891703 - L1M4 LINE L1 -5735 807 492 5 1030 258 275 58 81 chr17 58381434 58381521 -36891130 - 7SLRNA srpRNA srpRNA -227 87 3 6 1030 381 291 81 88 chr17 58381618 58381809 -36890842 + RMER5 LTR ERV1 48 233 -301 6 1030 2640 54 3 9 chr17 58381809 58382147 -36890504 + L1_Mus1 LINE L1 6231 6566 -1 6 1030 381 291 81 88 chr17 58382147 58382252 -36890399 + RMER5 LTR ERV1 234 342 -192 6 1030 351 0 0 0 chr17 58382443 58382482 -36890169 + (TTA)n Simple_repeat Simple_repeat 1 39 0 6 1030 5386 164 47 71 chr17 58382484 58383716 -36888935 - Lx2A LINE L1 -17 6991 5790 6 1030 407 235 33 16 chr17 58383717 58383838 -36888813 + RMER5 LTR ERV1 344 466 -68 6 1030 188 67 33 0 chr17 58383871 58383901 -36888750 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 1030 401 0 20 0 chr17 58383903 58383952 -36888699 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 1030 1010 243 54 43 chr17 58384247 58384648 -36888003 - RMER10A LTR ERVL -9 433 1 6 1030 318 264 60 20 chr17 58385349 58385500 -36887151 - Lx2B LINE L1 -3 6997 6841 6 1030 8400 74 17 21 chr17 58385524 58386703 -36885948 + RLTR22_Mus LTR ERVK 635 1808 0 6 1030 3251 177 43 12 chr17 58386728 58387285 -36885366 - Lx2B LINE L1 -701 6299 5722 6 1030 216 0 0 0 chr17 58387285 58387309 -36885342 + (TTG)n Simple_repeat Simple_repeat 1 24 0 6 1030 3251 177 43 12 chr17 58387309 58387442 -36885209 - Lx2B LINE L1 -1279 5721 5588 6 1030 614 169 7 34 chr17 58387564 58387690 -36884961 - Lx LINE L1 0 6654 6534 6 1030 264 30 0 0 chr17 58387690 58387723 -36884928 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1030 614 169 7 34 chr17 58387723 58387743 -36884908 - Lx LINE L1 -121 6533 6513 6 1030 357 121 0 65 chr17 58387750 58387812 -36884839 + Lx LINE L1 6429 6486 -168 6 1030 4182 156 20 15 chr17 58387809 58388589 -36884062 - Lx2B LINE L1 -304 5573 4790 6 1030 485 323 47 76 chr17 58388641 58388916 -36883735 - B4A SINE B4 -6 286 20 6 1030 600 269 173 0 chr17 58389834 58390083 -36882568 - B4A SINE B4 0 292 1 6 1030 284 373 7 22 chr17 58390425 58390562 -36882089 - MIRb SINE MIR -38 230 96 6 1030 473 274 35 59 chr17 58390685 58390887 -36881764 + B3A SINE B2 2 198 0 6 1030 450 36 0 0 chr17 58391443 58391499 -36881152 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 1030 8849 160 206 26 chr17 58391552 58394169 -36878482 + L1Md_F2 LINE L1 234 3261 -2622 6 1030 437 0 19 0 chr17 58394169 58394222 -36878429 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 1030 8849 162 319 16 chr17 58394222 58395907 -36876744 + L1Md_F2 LINE L1 3262 5586 -297 6 1030 8075 43 1 1 chr17 58395908 58396892 -36875759 + L1Md_F2 LINE L1 5588 6571 -11 6 1030 248 77 26 0 chr17 58396899 58396938 -36875713 + (GAAAA)n Simple_repeat Simple_repeat 2 41 0 6 1030 7342 104 12 9 chr17 58396938 58398035 -36874616 + Lx3_Mus LINE L1 5910 7009 0 6 1030 22 0 0 0 chr17 58398092 58398114 -36874537 + AT_rich Low_complexity Low_complexity 1 22 0 6 1030 23 33 0 0 chr17 58398153 58398183 -36874468 + AT_rich Low_complexity Low_complexity 1 30 0 6 1030 669 218 58 110 chr17 58398296 58398487 -36874164 + ORR1D1 LTR MaLR 6 186 -188 6 1030 509 168 8 0 chr17 58398487 58398598 -36874053 + CT-rich Low_complexity Low_complexity 10 121 0 6 1030 369 0 0 0 chr17 58398598 58398639 -36874012 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1030 235 269 26 0 chr17 58398686 58398764 -36873887 + ORR1D1 LTR MaLR 294 373 -1 6 1030 918 282 100 34 chr17 58398866 58399215 -36873436 - MTEb LTR MaLR -5 374 3 6 1030 330 107 0 0 chr17 58400172 58400228 -36872423 + (TC)n Simple_repeat Simple_repeat 1 56 0 6 1030 558 189 0 0 chr17 58400228 58400408 -36872243 + CT-rich Low_complexity Low_complexity 1 180 0 6 1030 442 220 291 11 chr17 58400500 58400675 -36871976 - B4A SINE B4 -68 224 1 6 1030 236 425 0 0 chr17 58400700 58400820 -36871831 - PB1 SINE Alu -7 120 1 6 1030 7345 64 0 1 chr17 58401384 58402357 -36870294 + L1_Mus2 LINE L1 5600 6653 -1 6 1030 289 189 38 104 chr17 58402433 58402539 -36870112 - RLTR10 LTR ERVK 0 390 292 6 1030 1373 35 6 0 chr17 58402564 58402736 -36869915 - RLTR10-int LTR ERVK -1775 212 40 6 1030 1072 198 137 3 chr17 58402743 58403000 -36869651 - IAPEY3_LTR LTR ERVK -48 388 1 6 1030 230 221 48 9 chr17 58403264 58403369 -36869282 + (TTATA)n Simple_repeat Simple_repeat 2 110 0 6 1030 567 29 0 0 chr17 58403629 58403698 -36868953 + (GA)n Simple_repeat Simple_repeat 2 70 0 6 1030 1493 263 45 0 chr17 58403973 58404330 -36868321 - MT2A LTR ERVL -66 467 95 6 1030 278 49 0 0 chr17 58404672 58404713 -36867938 - L1_Mm LINE L1 -3751 2132 2092 6 1030 995 295 32 11 chr17 58405129 58405413 -36867238 + B4A SINE B4 1 290 -2 6 1030 219 146 0 0 chr17 58405892 58405933 -36866718 + (A)n Simple_repeat Simple_repeat 1 41 0 6 1030 265 315 120 57 chr17 58405956 58406165 -36866486 + ORR1D2 LTR MaLR 20 241 -129 6 1030 1500 178 7 17 chr17 58406876 58407167 -36865484 - Lx2B LINE L1 -4 6996 6709 6 1030 1319 133 0 5 chr17 58407170 58407381 -36865270 + Lx2B LINE L1 6466 6675 -325 6 1030 210 322 34 0 chr17 58407381 58407440 -36865211 - B3 SINE B2 -155 61 1 6 1030 669 295 111 94 chr17 58407751 58408122 -36864529 - MTE2a LTR MaLR -1 378 2 6 1030 506 332 30 66 chr17 58408672 58408975 -36863676 - B4A SINE B4 0 292 1 6 1030 4134 23 6 2 chr17 58409412 58409893 -36862758 + L1Md_F2 LINE L1 6098 6580 -2 6 1030 189 121 0 0 chr17 58409906 58409939 -36862712 + (A)n Simple_repeat Simple_repeat 1 33 0 6 1030 205 226 19 0 chr17 58410074 58410127 -36862524 + T-rich Low_complexity Low_complexity 5 58 0 6 1030 279 272 12 0 chr17 58410124 58410205 -36862446 + (TG)n Simple_repeat Simple_repeat 1 82 0 6 1030 524 360 34 19 chr17 58410214 58410421 -36862230 - B4 SINE B4 -2 290 81 6 1030 212 304 38 12 chr17 58411742 58411822 -36860829 + RSINE1 SINE B4 82 163 -2 6 1030 856 297 95 60 chr17 58411843 58412412 -36860239 - RLTR17 LTR ERVK -62 630 32 6 1030 934 67 104 7 chr17 58412558 58412693 -36859958 - B1_Mus1 SINE Alu 0 148 1 6 1030 486 292 83 19 chr17 58412693 58413066 -36859585 - L1_Rod LINE L1 -3841 2006 1610 6 1030 21 0 0 0 chr17 58413082 58413103 -36859548 + AT_rich Low_complexity Low_complexity 1 21 0 6 1030 2470 168 115 24 chr17 58413122 58413710 -36858941 - RLTR26 LTR ERVK 0 642 1 6 1030 3450 152 62 6 chr17 58413711 58414345 -36858306 - Lx2B LINE L1 -45 6955 6287 6 1030 318 96 0 0 chr17 58414346 58414398 -36858253 + MERVL_2A-int LTR ERVL 5343 5394 -367 6 1030 943 259 96 4 chr17 58414508 58414768 -36857883 - RMER1B Other Other -738 328 45 6 1030 513 322 62 30 chr17 58414938 58415434 -36857217 - L1M3 LINE L1 -1991 4149 3638 6 1030 455 302 34 0 chr17 58415914 58416033 -36856618 + RSINE1 SINE B4 8 130 -35 6 1030 435 38 0 0 chr17 58416064 58416117 -36856534 + (CATA)n Simple_repeat Simple_repeat 1 53 0 6 1030 242 308 86 0 chr17 58416349 58416466 -36856185 + MIRb SINE MIR 132 258 -10 6 1030 338 375 75 79 chr17 58416785 58417063 -36855588 + B4A SINE B4 8 284 -8 6 1030 276 309 47 39 chr17 58417322 58417450 -36855201 + MIR3 SINE MIR 6 134 -74 6 1030 2870 43 3 0 chr17 58417879 58418224 -36854427 - ORR1A1 LTR MaLR 0 346 1 6 1030 1281 53 0 0 chr17 58418230 58418476 -36854175 + (TTTC)n Simple_repeat Simple_repeat 1 246 0 6 1030 551 320 75 51 chr17 58418562 58418776 -36853875 - B4A SINE B4 0 292 74 6 1030 399 119 0 0 chr17 58419425 58419492 -36853159 + (GA)n Simple_repeat Simple_repeat 2 68 0 6 1030 727 298 58 87 chr17 58419542 58419854 -36852797 + ORR1E LTR MaLR 55 357 -2 6 1030 1638 15 0 0 chr17 58420159 58420355 -36852296 - L1Md_T LINE L1 -653 5929 5734 6 1030 5486 34 0 0 chr17 58420355 58421000 -36851651 + L1Md_T LINE L1 5938 6582 0 6 1030 382 318 0 0 chr17 58421013 58421101 -36851550 + ID_B1 SINE B4 129 216 -8 6 1030 1044 282 49 10 chr17 58421243 58421630 -36851021 + Lx9 LINE L1 7083 7484 -160 6 1030 186 43 0 0 chr17 58421631 58421654 -36850997 + (TAG)n Simple_repeat Simple_repeat 1 23 0 6 1030 303 28 0 0 chr17 58422092 58422128 -36850523 + (TTA)n Simple_repeat Simple_repeat 1 36 0 6 1030 246 243 12 129 chr17 58422157 58422242 -36850409 + B4 SINE B4 13 87 -205 6 1030 727 297 27 6 chr17 58422292 58422475 -36850176 + B4A SINE B4 106 292 0 6 1030 276 283 21 11 chr17 58422673 58422766 -36849885 + CT-rich Low_complexity Low_complexity 3 96 0 6 1030 450 0 0 0 chr17 58422766 58422816 -36849835 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1030 931 268 0 72 chr17 58423576 58423692 -36848959 - ID_B1 SINE B4 -2 222 113 6 1030 3243 133 181 103 chr17 58423692 58424533 -36848118 + RMER17A2 LTR ERVK 1 906 0 6 1030 931 268 0 72 chr17 58424533 58424653 -36847998 - ID_B1 SINE B4 -112 112 3 6 1030 333 0 0 0 chr17 58426061 58426098 -36846553 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1030 574 265 98 35 chr17 58426498 58426701 -36845950 + B3 SINE B2 1 216 0 6 1030 426 94 0 0 chr17 58426843 58426907 -36845744 + (TG)n Simple_repeat Simple_repeat 2 65 0 6 1030 1574 221 69 16 chr17 58427045 58427447 -36845204 - RLTR11A2 LTR ERVK -31 496 63 6 1030 6314 86 57 14 chr17 58427447 58428827 -36843824 + L1VL4 LINE L1 193 1832 -1727 6 1030 495 0 0 0 chr17 58428827 58428882 -36843769 + (CA)n Simple_repeat Simple_repeat 1 55 0 6 1030 23 97 0 0 chr17 58429167 58429239 -36843412 + AT_rich Low_complexity Low_complexity 1 72 0 6 1030 24 0 0 0 chr17 58429341 58429365 -36843286 + AT_rich Low_complexity Low_complexity 1 24 0 6 1030 340 345 110 18 chr17 58429582 58429854 -36842797 + Lx8 LINE L1 6889 7185 -288 6 1030 1078 84 0 0 chr17 58430497 58430639 -36842012 + B1_Mus2 SINE Alu 6 147 0 6 1030 243 161 0 0 chr17 58430639 58430695 -36841956 + A-rich Low_complexity Low_complexity 1 56 0 6 1030 302 277 71 0 chr17 58430898 58431010 -36841641 + MTEb LTR MaLR 135 254 -125 6 1030 525 32 0 0 chr17 58431264 58431327 -36841324 + (TG)n Simple_repeat Simple_repeat 1 63 0 6 1030 24 0 0 0 chr17 58431872 58431896 -36840755 + AT_rich Low_complexity Low_complexity 1 24 0 6 1030 278 62 42 0 chr17 58434228 58434276 -36838375 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 6 1030 500 281 149 24 chr17 58434281 58434536 -36838115 + B4A SINE B4 5 291 -1 6 1030 602 303 128 42 chr17 58435660 58435925 -36836726 + B4 SINE B4 1 288 -4 6 1030 31 36 0 18 chr17 58436610 58436647 -36836004 + AT_rich Low_complexity Low_complexity 1 37 0 7 1030 1148 71 0 0 chr17 58436647 58436788 -36835863 - B1_Mm SINE Alu -5 142 2 7 1030 31 36 0 18 chr17 58436788 58436806 -36835845 + AT_rich Low_complexity Low_complexity 1 18 0 7 1030 221 333 0 0 chr17 58436911 58436974 -36835677 + ID4_ SINE ID 5 67 -16 7 1030 450 0 0 0 chr17 58437599 58437649 -36835002 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 1030 770 265 127 9 chr17 58437669 58437882 -36834769 - B4 SINE B4 -43 249 12 7 1030 898 172 69 14 chr17 58438528 58438746 -36833905 + Lx3C LINE L1 6718 6947 -29 7 1030 381 43 0 0 chr17 58438771 58438818 -36833833 + (TAAAA)n Simple_repeat Simple_repeat 3 49 0 7 1030 414 302 0 0 chr17 58438824 58438920 -36833731 + RSINE1 SINE B4 3 98 -67 7 1030 205 231 19 0 chr17 58439052 58439104 -36833547 + (TA)n Simple_repeat Simple_repeat 1 53 0 7 1030 818 305 4 55 chr17 58439375 58439559 -36833092 - MTEb LTR MaLR -3 376 201 7 1030 1302 86 21 0 chr17 58439559 58439745 -36832906 + B2_Mm1t SINE B2 3 192 -1 7 1030 818 305 4 55 chr17 58439745 58439831 -36832820 - MTEb LTR MaLR -179 200 120 7 1030 239 0 32 0 chr17 58439855 58439886 -36832765 + (TTG)n Simple_repeat Simple_repeat 2 33 0 7 1030 241 62 0 0 chr17 58439886 58439918 -36832733 - B1_Mus2 SINE Alu -8 139 108 7 1030 248 347 10 0 chr17 58439930 58440028 -36832623 - MTEb LTR MaLR -280 99 1 7 1030 1709 51 0 0 chr17 58440050 58440266 -36832385 - L1Md_F2 LINE L1 -146 5737 5522 7 1030 7378 31 3 0 chr17 58440266 58441133 -36831518 + L1Md_F2 LINE L1 5712 6581 -1 7 1030 210 339 156 16 chr17 58441180 58441366 -36831285 + MIR SINE MIR 16 227 -35 7 1030 1013 139 0 0 chr17 58441732 58441897 -36830754 - URR1A DNA MER1_type 0 226 62 7 1030 488 222 28 0 chr17 58442006 58442114 -36830537 - URR1A DNA MER1_type -103 123 13 7 1030 686 300 14 28 chr17 58442456 58442672 -36829979 + B3 SINE B2 3 215 -1 7 1030 1036 295 21 21 chr17 58442705 58442992 -36829659 + B4 SINE B4 6 292 0 7 1030 471 18 0 0 chr17 58442995 58443051 -36829600 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 1030 197 235 85 96 chr17 58443155 58443249 -36829402 - L3 LINE CR1 -656 3833 3741 7 1030 180 328 16 0 chr17 58443279 58443340 -36829311 - MIRb SINE MIR 0 268 207 7 1030 299 372 0 28 chr17 58444053 58444230 -36828421 + (CACCAT)n Simple_repeat Simple_repeat 3 174 0 7 1030 1068 295 66 10 chr17 58444232 58444520 -36828131 - MTEb LTR MaLR -2 377 74 7 1030 523 319 7 0 chr17 58445594 58445735 -36826916 + MTD LTR MaLR 1 142 -277 7 1030 278 205 0 13 chr17 58446282 58446361 -36826290 + (TG)n Simple_repeat Simple_repeat 1 78 0 7 1030 1289 272 16 61 chr17 58447494 58447870 -36824781 - RMER19C LTR ERVK 0 611 253 7 1030 463 286 27 10 chr17 58448831 58448948 -36823703 + RSINE1 SINE B4 2 121 -44 7 1030 1564 177 17 67 chr17 58449029 58449374 -36823277 + ORR1A4 LTR MaLR 2 329 0 7 1030 600 27 0 0 chr17 58449376 58449450 -36823201 + (TG)n Simple_repeat Simple_repeat 1 74 0 7 1030 342 0 0 0 chr17 58449515 58449553 -36823098 + (TC)n Simple_repeat Simple_repeat 2 39 0 7 1030 372 43 0 0 chr17 58449553 58449598 -36823053 + (TA)n Simple_repeat Simple_repeat 1 46 0 7 1030 938 287 108 20 chr17 58450445 58450787 -36821864 - ORR1D1 LTR MaLR 0 374 3 7 1030 628 302 86 43 chr17 58451013 58451245 -36821406 - B4 SINE B4 -50 242 1 7 1030 1093 178 18 5 chr17 58451366 58451586 -36821065 - URR1A DNA MER1_type -1 225 3 7 1030 685 307 11 40 chr17 58452656 58452863 -36819788 - ID_B1 SINE B4 -44 248 54 7 1030 1425 171 113 79 chr17 58453770 58454088 -36818563 - ORR1A4 LTR MaLR 0 329 1 7 1030 7640 88 8 4 chr17 58454318 58456112 -36816539 - L1_Mus1 LINE L1 -2 6565 4766 7 1030 205 294 12 12 chr17 58456216 58456302 -36816349 + (TATATG)n Simple_repeat Simple_repeat 5 90 0 7 1030 301 306 72 120 chr17 58456346 58456446 -36816205 - RLTR20D LTR ERVK 0 568 466 7 1030 267 54 0 0 chr17 58456446 58456483 -36816168 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1030 301 306 72 120 chr17 58456483 58456549 -36816102 - RLTR20D LTR ERVK -103 465 410 7 1030 1413 199 49 0 chr17 58456549 58456835 -36815816 - Lx3B LINE L1 -35 6938 6639 7 1030 2535 166 58 9 chr17 58456837 58457288 -36815363 - RLTR20D LTR ERVK -95 473 1 7 1030 261 57 0 0 chr17 58457313 58457348 -36815303 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1030 2196 205 45 37 chr17 58457358 58458099 -36814552 - MYSERV16_I-int LTR ERVK -33 2809 1694 7 1031 36136 48 0 3 chr17 58458125 58464632 -36808019 - L1Md_T LINE L1 0 6585 1 7 1031 1868 118 40 75 chr17 58464647 58464741 -36807910 - MYSERV16_I-int LTR ERVK -825 1501 1426 7 1031 1173 55 7 0 chr17 58464741 58464887 -36807764 - B1_Mm SINE Alu 0 147 1 7 1031 1868 145 32 83 chr17 58464887 58465382 -36807269 - MYSERV16_I-int LTR ERVK -901 1425 813 7 1031 661 236 18 67 chr17 58465402 58465684 -36806967 - RMER3D-int LTR ERVK -1442 1400 1133 7 1031 613 239 116 0 chr17 58466186 58466267 -36806384 - RLTR20D LTR ERVK -9 559 463 7 1031 240 35 0 0 chr17 58466267 58466296 -36806355 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 1031 613 239 116 0 chr17 58466296 58466352 -36806299 - RLTR20D LTR ERVK -106 462 407 7 1031 246 289 20 20 chr17 58466813 58466912 -36805739 - L1M4 LINE L1 -557 5627 5529 7 1031 330 312 31 31 chr17 58467131 58467425 -36805226 - L1M4 LINE L1 -880 5266 4973 7 1031 369 0 0 0 chr17 58467510 58467551 -36805100 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1031 500 275 46 0 chr17 58467555 58467686 -36804965 - RSINE1 SINE B4 -19 146 10 7 1031 362 158 0 0 chr17 58467732 58467789 -36804862 - RLTR41 LTR ERV1 -77 369 313 7 1031 557 234 95 92 chr17 58467801 58468107 -36804544 + MYSERV16_I-int LTR ERVK 580 886 -1440 7 1031 1099 129 34 6 chr17 58468107 58468286 -36804365 - B2_Mm2 SINE B2 -9 186 3 7 1031 244 262 252 0 chr17 58468335 58468443 -36804208 + RMER4B LTR ERVK 449 536 -49 7 1031 4544 178 32 2 chr17 58468443 58469408 -36803243 + MYSERV16_I-int LTR ERVK 1037 2030 -296 7 1031 299 265 12 12 chr17 58470271 58470355 -36802296 + CT-rich Low_complexity Low_complexity 3 86 0 7 1031 312 312 13 36 chr17 58472507 58472707 -36799944 - MuLV-int LTR ERV1 -1919 5682 5492 7 1031 3658 334 50 42 chr17 58472957 58476030 -36796621 - MuLV-int LTR ERV1 -2354 5252 2161 7 1031 288 0 0 0 chr17 58476030 58476062 -36796589 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 1031 3658 344 44 35 chr17 58476062 58476540 -36796111 - MuLV-int LTR ERV1 -5367 2189 1692 7 1031 212 0 36 0 chr17 58476555 58476583 -36796068 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 7 1031 189 0 0 0 chr17 58477031 58477052 -36795599 + (A)n Simple_repeat Simple_repeat 1 21 0 7 1031 205 171 0 0 chr17 58478180 58478215 -36794436 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1031 896 236 120 67 chr17 58479290 58479649 -36793002 - RMER5 LTR ERV1 0 534 157 7 1031 237 65 0 0 chr17 58480831 58480862 -36791789 + (T)n Simple_repeat Simple_repeat 1 31 0 7 1031 567 287 63 98 chr17 58482014 58482269 -36790382 + B4A SINE B4 9 254 -38 7 1031 459 0 0 0 chr17 58482453 58482504 -36790147 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 1031 27 0 0 0 chr17 58482895 58482922 -36789729 + AT_rich Low_complexity Low_complexity 1 27 0 7 1031 591 278 67 24 chr17 58483511 58483721 -36788930 - RMER15 LTR ERVL -16 559 341 7 1031 451 281 112 64 chr17 58484064 58484375 -36788276 + MTEb LTR MaLR 49 375 -4 7 1031 228 294 105 105 chr17 58484409 58484523 -36788128 - MLT1E2 LTR MaLR -127 500 387 7 1031 326 235 0 0 chr17 58484546 58484631 -36788020 + Lx7 LINE L1 6984 7068 -628 7 1031 250 315 54 0 chr17 58484651 58484743 -36787908 + Lx7 LINE L1 6431 6527 -1169 7 1031 189 107 0 0 chr17 58484809 58484837 -36787814 + (TA)n Simple_repeat Simple_repeat 2 29 0 7 1031 2693 205 82 14 chr17 58485033 58485681 -36786970 - RLTR17 LTR ERVK 0 692 1 7 1031 237 264 40 24 chr17 58485744 58485868 -36786783 + (TTTG)n Simple_repeat Simple_repeat 3 128 0 7 1031 32 57 0 0 chr17 58485957 58486010 -36786641 + AT_rich Low_complexity Low_complexity 1 53 0 7 1031 606 316 63 0 chr17 58486457 58486710 -36785941 + Lx8 LINE L1 6713 6981 -492 7 1031 343 332 74 74 chr17 58486732 58486947 -36785704 - B3 SINE B2 0 216 2 7 1031 613 314 66 60 chr17 58487422 58487761 -36784890 + ORR1E LTR MaLR 6 366 -13 7 1031 372 353 127 44 chr17 58487814 58487836 -36784815 + B4A SINE B4 16 35 -257 7 1031 180 0 0 0 chr17 58487836 58487856 -36784795 + (TA)n Simple_repeat Simple_repeat 1 20 0 7 1031 351 0 0 0 chr17 58487856 58487894 -36784757 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1031 372 353 127 44 chr17 58487894 58488122 -36784529 + B4A SINE B4 36 287 -5 7 1031 989 150 0 6 chr17 58488486 58488667 -36783984 + GA-rich Low_complexity Low_complexity 1 180 0 7 1031 244 315 0 43 chr17 58489034 58489127 -36783524 + B4A SINE B4 13 101 -191 7 1031 2242 142 36 34 chr17 58489182 58489597 -36783054 - RMER17A LTR ERVK 0 751 336 7 1031 905 181 115 5 chr17 58489765 58489965 -36782686 + URR1A DNA MER1_type 2 223 -3 7 1031 952 186 17 6 chr17 58492661 58492834 -36779817 + MTC LTR MaLR 247 421 0 7 1031 2452 238 42 79 chr17 58492834 58493903 -36778748 + MTC-int LTR MaLR 6 1171 -87 7 1031 853 96 88 0 chr17 58493903 58494028 -36778623 + B1_Mus1 SINE Alu 1 136 -12 7 1031 222 37 0 0 chr17 58494032 58494059 -36778592 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1031 2367 218 24 67 chr17 58494059 58494143 -36778508 + MTC-int LTR MaLR 1172 1256 -2 7 1031 2152 192 34 2 chr17 58494143 58494551 -36778100 + MTC LTR MaLR 1 421 0 7 1031 854 296 61 77 chr17 58495117 58495483 -36777168 - MTE2a LTR MaLR -14 405 51 7 1031 412 313 36 72 chr17 58496199 58496225 -36776426 - B2_Mm2 SINE B2 -9 186 161 7 1031 585 28 0 0 chr17 58496225 58496296 -36776355 + (TG)n Simple_repeat Simple_repeat 1 71 0 7 1031 626 303 40 7 chr17 58496296 58496462 -36776189 - B3A SINE B2 -35 160 1 7 1031 772 94 0 8 chr17 58496866 58496994 -36775657 - L1Md_F2 LINE L1 0 6582 6456 7 1031 247 282 12 0 chr17 58497118 58497203 -36775448 + (TA)n Simple_repeat Simple_repeat 2 87 0 7 1031 183 139 0 0 chr17 58497288 58497324 -36775327 + (GA)n Simple_repeat Simple_repeat 2 37 0 7 1031 658 369 7 44 chr17 58497445 58497720 -36774931 + B4A SINE B4 5 269 -23 7 1031 216 0 0 0 chr17 58497841 58497865 -36774786 + (CA)n Simple_repeat Simple_repeat 1 24 0 7 1031 290 370 0 0 chr17 58498860 58498960 -36773691 + MER5A DNA MER1_type 22 121 -68 7 1031 1047 108 49 38 chr17 58499286 58499469 -36773182 - B2_Mm2 SINE B2 -9 186 2 7 1031 202 295 139 73 chr17 58499579 58499882 -36772769 + L2 LINE L2 1387 1709 -1710 7 1031 1232 273 115 0 chr17 58500103 58500433 -36772218 - MTEa LTR MaLR -6 373 6 1 1031 1117 283 48 0 chr17 58500529 58500819 -36771832 - RMER15 LTR ERVL 0 575 272 2 1031 399 235 49 70 chr17 58500825 58500967 -36771684 - RMER15 LTR ERVL -436 139 1 2 1031 827 284 59 104 chr17 58502014 58502352 -36770299 - MTE2a LTR MaLR 0 379 57 3 1031 31 0 0 0 chr17 58503953 58503984 -36768667 + AT_rich Low_complexity Low_complexity 1 31 0 4 1031 206 254 0 15 chr17 58505479 58505547 -36767104 + GA-rich Low_complexity Low_complexity 6 72 0 5 1031 438 324 41 14 chr17 58505727 58505874 -36766777 + B4 SINE B4 44 194 -98 6 1031 186 43 0 0 chr17 58505979 58506002 -36766649 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 1031 1365 204 8 15 chr17 58506793 58507057 -36765594 - ORR1B1 LTR MaLR -92 302 41 8 1031 1657 258 35 107 chr17 58507074 58507771 -36764880 - MTC-int LTR MaLR -278 820 134 9 1031 374 271 163 0 chr17 58507773 58507902 -36764749 + MTE2a LTR MaLR 230 379 0 1 1031 211 296 0 0 chr17 58507902 58507956 -36764695 + MIR SINE MIR 107 160 -102 1 1031 814 319 105 23 chr17 58508395 58508738 -36763913 - MTEa LTR MaLR -8 371 1 1 1031 989 309 37 31 chr17 58509053 58509404 -36763247 - ORR1E LTR MaLR -6 353 1 1 1031 492 18 0 0 chr17 58509814 58509871 -36762780 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 1031 767 312 10 5 chr17 58509873 58510079 -36762572 - B4 SINE B4 -85 207 1 1 1031 288 370 106 39 chr17 58510496 58510752 -36761899 + B4 SINE B4 2 274 -18 1 1031 396 0 0 0 chr17 58510827 58510871 -36761780 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 1031 262 320 111 86 chr17 58511037 58511362 -36761289 - MLT2C1 LTR ERVL -53 344 12 1 1031 572 282 152 56 chr17 58511519 58511737 -36760914 + MTE2a LTR MaLR 1 239 -180 1 1031 597 277 48 58 chr17 58511787 58511975 -36760676 + MTE2a LTR MaLR 194 379 0 1 1031 349 335 107 25 chr17 58512071 58512230 -36760421 - L1MB5 LINE L1 -90 6084 5913 2 1031 1041 304 39 15 chr17 58512233 58512567 -36760084 + MTEa LTR MaLR 38 379 0 2 1031 717 324 5 10 chr17 58513107 58513313 -36759338 - B4 SINE B4 -86 206 2 2 1031 1221 229 155 71 chr17 58514777 58515024 -36757627 + Lx9 LINE L1 6029 6310 -1334 2 1031 1152 0 0 0 chr17 58515024 58515152 -36757499 + (CATATA)n Simple_repeat Simple_repeat 4 131 0 2 1031 1221 229 155 71 chr17 58515152 58515256 -36757395 + Lx9 LINE L1 6311 6434 -1210 2 1031 2025 107 16 9 chr17 58515256 58515576 -36757075 - L1_Mus3 LINE L1 0 6638 6317 2 1031 1221 229 155 71 chr17 58515576 58515745 -36756906 + Lx9 LINE L1 6435 6594 -1050 2 1031 251 330 11 0 chr17 58515746 58515840 -36756811 - L1MB5 LINE L1 -577 5591 5497 2 1031 641 192 79 7 chr17 58515995 58516147 -36756504 - RLTR22_Mur LTR ERVK -92 1756 1594 2 1031 4539 141 33 15 chr17 58516351 58517142 -36755509 - RLTR22_Mur LTR ERVK -1043 805 1 2 1031 780 306 30 26 chr17 58517923 58518191 -36754460 - B4 SINE B4 -23 269 1 2 1031 23 0 0 0 chr17 58519015 58519038 -36753613 + AT_rich Low_complexity Low_complexity 1 23 0 2 1031 391 264 3 2 chr17 58519572 58519662 -36752989 + B4A SINE B4 6 96 -196 2 1031 219 150 0 0 chr17 58519841 58519881 -36752770 + (A)n Simple_repeat Simple_repeat 1 40 0 3 1031 606 301 106 19 chr17 58520318 58520525 -36752126 + MTEa LTR MaLR 1 225 -154 3 1031 293 343 91 51 chr17 58520500 58520675 -36751976 - MTE2b LTR MaLR -197 182 1 3 1031 658 306 83 23 chr17 58521302 58521566 -36751085 - B4A SINE B4 -8 284 5 3 1031 392 155 0 88 chr17 58522364 58522477 -36750174 - Lx9 LINE L1 -1 7643 7541 3 1031 198 0 0 0 chr17 58522478 58522500 -36750151 + (TA)n Simple_repeat Simple_repeat 2 23 0 3 1031 402 100 0 0 chr17 58522609 58522669 -36749982 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 1031 1033 43 0 21 chr17 58522750 58522894 -36749757 - L1Md_F2 LINE L1 0 6582 6442 3 1031 425 290 15 22 chr17 58522962 58523096 -36749555 - RMER15 LTR ERVL -164 411 279 3 1031 22 35 0 0 chr17 58523310 58523339 -36749312 + AT_rich Low_complexity Low_complexity 1 29 0 3 1031 306 333 106 87 chr17 58523864 58524025 -36748626 - B4A SINE B4 -71 221 58 4 1031 443 284 118 7 chr17 58524556 58524691 -36747960 + B3A SINE B2 1 150 -48 4 1031 279 0 0 0 chr17 58524720 58524751 -36747900 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 1031 26 30 0 0 chr17 58525024 58525057 -36747594 + AT_rich Low_complexity Low_complexity 1 33 0 4 1031 235 267 59 0 chr17 58525070 58525171 -36747480 + L1MA8 LINE L1 6003 6109 -182 4 1031 378 409 24 49 chr17 58525409 58525697 -36746954 - B4A SINE B4 -6 286 6 4 1031 14961 193 40 79 chr17 58526431 58530325 -36742326 - Lx5 LINE L1 0 7050 3132 4 1031 180 0 0 0 chr17 58530325 58530345 -36742306 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 4 1031 14961 176 40 91 chr17 58530345 58530364 -36742287 - Lx5 LINE L1 -2746 3131 3115 4 1031 872 146 0 0 chr17 58530364 58530494 -36742157 - B2_Mm2 SINE B2 -63 132 3 4 1031 14961 176 40 91 chr17 58530494 58531554 -36741097 - Lx5 LINE L1 -2746 3114 2157 4 1031 8512 113 20 7 chr17 58531552 58533398 -36739253 - L1VL4 LINE L1 -1434 2125 254 4 1031 239 234 130 0 chr17 58533400 58533477 -36739174 - Lx5 LINE L1 -6030 954 868 4 1031 1166 263 97 12 chr17 58534913 58535233 -36737418 - MTE2b LTR MaLR -30 349 3 5 1031 22 0 0 0 chr17 58535294 58535316 -36737335 + AT_rich Low_complexity Low_complexity 1 22 0 5 1031 614 346 30 0 chr17 58535716 58535982 -36736669 + B4A SINE B4 2 275 -17 5 1031 183 167 0 0 chr17 58536037 58536079 -36736572 + (TAAA)n Simple_repeat Simple_repeat 4 45 0 5 1031 260 269 183 0 chr17 58536430 58536523 -36736128 - L1M2 LINE L1 -498 5793 5684 5 1031 487 301 116 59 chr17 58536535 58537242 -36735409 + L1M2 LINE L1 4712 5469 -714 5 1031 495 0 0 0 chr17 58537353 58537408 -36735243 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 5 1031 1456 292 112 24 chr17 58537758 58538259 -36734392 - RMER15 LTR ERVL -2 573 29 5 1031 24054 107 51 6 chr17 58538267 58542269 -36730382 - L1_Mus1 LINE L1 -6 6561 1960 5 1031 375 23 0 0 chr17 58542269 58542313 -36730338 + (TTG)n Simple_repeat Simple_repeat 2 45 0 5 1031 24054 97 22 15 chr17 58542313 58543850 -36728801 - L1_Mus1 LINE L1 -3924 1959 415 5 1031 3904 167 30 106 chr17 58544053 58545030 -36727621 - RLTR13D6 LTR ERVK 0 902 1 6 1031 238 263 40 0 chr17 58545269 58545345 -36727306 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 6 1031 22 0 0 0 chr17 58545657 58545679 -36726972 + AT_rich Low_complexity Low_complexity 1 22 0 6 1031 365 358 0 28 chr17 58546067 58546248 -36726403 + CT-rich Low_complexity Low_complexity 4 179 0 6 1031 270 0 0 0 chr17 58549024 58549054 -36723597 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 6 1031 228 200 0 0 chr17 58549092 58549142 -36723509 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 1031 241 237 0 0 chr17 58549142 58549201 -36723450 + GA-rich Low_complexity Low_complexity 1 59 0 6 1031 641 47 12 0 chr17 58549820 58549905 -36722746 + (TTTC)n Simple_repeat Simple_repeat 3 88 0 6 1031 384 59 0 0 chr17 58550258 58550309 -36722342 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 1031 648 119 26 13 chr17 58550515 58550668 -36721983 + (CAGAGA)n Simple_repeat Simple_repeat 2 156 0 6 1031 638 169 0 26 chr17 58551080 58551232 -36721419 - Lx LINE L1 -4 6650 6503 7 1031 3936 85 2 6 chr17 58552061 58552593 -36720058 - L1_Mus2 LINE L1 0 6566 6037 7 1031 333 47 0 0 chr17 58553124 58553167 -36719484 + (TCTCCC)n Simple_repeat Simple_repeat 3 45 0 7 1031 235 214 31 134 chr17 58553212 58553309 -36719342 - MT2B LTR ERVL -216 385 299 7 1031 265 284 67 22 chr17 58553386 58553476 -36719175 + B1_Mur1 SINE Alu 34 127 -22 7 1031 300 271 71 20 chr17 58553779 58553877 -36718774 - B1_Mur1 SINE Alu -13 136 34 7 1031 235 214 31 134 chr17 58553954 58554051 -36718600 + MT2B LTR ERVL 299 385 -216 7 1031 441 90 0 0 chr17 58554271 58554338 -36718313 + (CATAT)n Simple_repeat Simple_repeat 1 67 0 7 1031 1732 67 0 0 chr17 58554797 58555022 -36717629 - L1Md_T LINE L1 0 6582 6358 7 1031 444 19 0 0 chr17 58555150 58555203 -36717448 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 1031 405 0 0 0 chr17 58555203 58555247 -36717404 + (GA)n Simple_repeat Simple_repeat 2 46 0 8 1031 603 74 0 0 chr17 58556555 58556636 -36716015 + (GAAA)n Simple_repeat Simple_repeat 2 82 0 8 1031 194 59 29 0 chr17 58557110 58557130 -36715521 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 8 1031 192 77 0 0 chr17 58557130 58557156 -36715495 + (TTA)n Simple_repeat Simple_repeat 2 27 0 8 1031 194 59 29 0 chr17 58557156 58557169 -36715482 + (TTTG)n Simple_repeat Simple_repeat 3 16 0 8 1031 508 313 24 71 chr17 58557898 58557985 -36714666 + ID SINE ID 2 78 -146 8 1031 210 319 67 80 chr17 58557985 58558135 -36714516 + B1F2 SINE Alu 1 148 -1 8 1031 5915 201 24 8 chr17 58558857 58561060 -36711591 + Lx2B LINE L1 4637 6979 -79 8 1031 295 274 40 40 chr17 58562391 58562543 -36710108 + L1MB3 LINE L1 5939 6090 -93 8 1031 646 322 120 17 chr17 58562678 58562912 -36709739 + B4 SINE B4 9 266 -26 8 1031 201 39 0 0 chr17 58562912 58562938 -36709713 + (CA)n Simple_repeat Simple_repeat 1 26 0 9 1031 699 12 0 0 chr17 58564420 58564500 -36708151 + (TTTC)n Simple_repeat Simple_repeat 1 80 0 9 1031 432 0 0 0 chr17 58564501 58564549 -36708102 + (TTC)n Simple_repeat Simple_repeat 1 48 0 9 1031 877 172 0 11 chr17 58564550 58564657 -36707994 + polypyrimidine Low_complexity Low_complexity 75 180 0 9 1031 1350 67 0 0 chr17 58564657 58564835 -36707816 + (TCC)n Simple_repeat Simple_repeat 3 180 0 9 1031 877 172 0 11 chr17 58564835 58564909 -36707742 + polypyrimidine Low_complexity Low_complexity 1 74 0 9 1031 457 120 12 12 chr17 58564917 58565001 -36707650 + (TCC)n Simple_repeat Simple_repeat 3 86 0 9 1031 1688 207 34 49 chr17 58565183 58565594 -36707057 + RMER10A LTR ERVL 37 441 -1 9 1031 1117 85 0 0 chr17 58565904 58566045 -36706606 + B1_Mus2 SINE Alu 2 142 -5 9 1031 866 204 46 28 chr17 58567307 58567524 -36705127 - L1_Mur2 LINE L1 -1524 4353 4133 9 1031 379 150 36 36 chr17 58568671 58568754 -36703897 + RMER15 LTR ERVL 49 131 -444 1 1031 684 93 0 0 chr17 58568758 58568855 -36703796 + (CA)n Simple_repeat Simple_repeat 2 98 0 1 1031 960 270 42 0 chr17 58568913 58569172 -36703479 + RMER15 LTR ERVL 302 571 -4 1 1031 2978 35 0 0 chr17 58569241 58569587 -36703064 - ORR1A0 LTR MaLR 0 346 1 1 1031 944 106 7 0 chr17 58569661 58569803 -36702848 + Lx2 LINE L1 6709 6851 -146 1 1031 365 314 0 56 chr17 58570470 58570578 -36702073 + PB1D9 SINE Alu 3 104 -16 1 1031 699 12 0 0 chr17 58570578 58570658 -36701993 + (GA)n Simple_repeat Simple_repeat 1 80 0 1 1031 207 283 17 0 chr17 58570721 58570781 -36701870 + GA-rich Low_complexity Low_complexity 2 62 0 1 1031 1144 249 110 12 chr17 58571394 58571731 -36700920 - ORR1D2 LTR MaLR 0 370 1 1 1031 378 61 0 0 chr17 58572619 58572668 -36699983 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1031 516 296 91 18 chr17 58572705 58572870 -36699781 - B4A SINE B4 0 292 116 1 1031 1108 75 0 33 chr17 58573412 58573550 -36699101 + B1_Mus1 SINE Alu 1 135 -13 1 1031 252 0 0 0 chr17 58573550 58573578 -36699073 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 1 1031 1108 75 0 33 chr17 58573578 58573590 -36699061 + B1_Mus1 SINE Alu 136 146 -2 1 1031 467 258 30 22 chr17 58573905 58574040 -36698611 + Lx7 LINE L1 6863 6998 -698 1 1031 301 245 124 35 chr17 58574470 58574651 -36698000 - RMER15 LTR ERVL -4 571 347 1 1031 420 37 0 0 chr17 58574664 58574718 -36697933 + (T)n Simple_repeat Simple_repeat 1 54 0 1 1031 184 237 26 0 chr17 58575706 58575744 -36696907 + MIR SINE MIR 115 153 -55 1 1031 249 98 0 0 chr17 58576137 58576178 -36696473 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1031 332 301 145 35 chr17 58576206 58576461 -36696190 - B4A SINE B4 -8 284 2 1 1031 301 363 98 19 chr17 58576936 58577141 -36695510 - HAL1 LINE L1 -477 2030 1810 1 1031 620 26 13 0 chr17 58577257 58577335 -36695316 + (GA)n Simple_repeat Simple_repeat 2 80 0 1 1031 550 277 45 22 chr17 58578507 58578870 -36693781 - RLTR6-int LTR ERV1 -147 7631 7067 1 1031 365 323 16 0 chr17 58580273 58580397 -36692254 - RLTR4_MM-int LTR ERV1 -1983 5618 5493 1 1031 590 307 0 0 chr17 58580784 58580911 -36691740 - B1_Mur2 SINE Alu -18 131 5 1 1031 387 0 0 0 chr17 58580951 58580994 -36691657 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1031 453 294 59 37 chr17 58581008 58581195 -36691456 - B4A SINE B4 0 292 102 1 1031 348 24 0 0 chr17 58581876 58581917 -36690734 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1031 238 179 0 67 chr17 58582060 58582082 -36690569 - RMER6C LTR ERVK -69 621 602 1 1031 6462 60 5 0 chr17 58582082 58582894 -36689757 - L1_Mus1 LINE L1 -1 6566 5751 1 1031 238 179 0 67 chr17 58582894 58582931 -36689720 - RMER6C LTR ERVK -89 601 566 1 1031 24 0 0 0 chr17 58583456 58583480 -36689171 + AT_rich Low_complexity Low_complexity 1 24 0 1 1031 8052 118 15 16 chr17 58583481 58585096 -36687555 - Lx3A LINE L1 -8 6973 5373 1 1031 180 0 0 0 chr17 58585252 58585272 -36687379 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 1 1031 552 161 8 104 chr17 58585440 58585565 -36687086 - RMER19C LTR ERVK -498 113 1 1 1031 561 355 59 10 chr17 58585763 58585965 -36686686 + B4 SINE B4 81 292 0 1 1031 306 73 0 0 chr17 58585987 58586028 -36686623 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1031 279 0 0 0 chr17 58586028 58586058 -36686593 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 1031 288 154 286 0 chr17 58586257 58586348 -36686303 - RMER1A Other Other -3 1027 911 1 1031 423 0 0 0 chr17 58586349 58586396 -36686255 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1031 1661 193 16 31 chr17 58586452 58586773 -36685878 - RMER20B LTR ERVK -307 320 5 1 1031 459 0 0 0 chr17 58586942 58586993 -36685658 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 1031 480 18 0 0 chr17 58586993 58587049 -36685602 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1031 306 0 0 0 chr17 58588381 58588415 -36684236 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 1 1031 3061 26 0 0 chr17 58588822 58589168 -36683483 - ORR1A0 LTR MaLR 0 346 1 1 1032 1424 130 38 22 chr17 58589846 58590113 -36682538 + Lx3_Mus LINE L1 6739 7009 0 1 1032 3781 175 34 9 chr17 58590113 58591037 -36681614 - Lx2 LINE L1 -651 6346 5403 1 1032 188 67 33 0 chr17 58591086 58591116 -36681535 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 1 1032 266 20 38 38 chr17 58591113 58591166 -36681485 + (TTTTA)n Simple_repeat Simple_repeat 3 55 0 1 1032 4957 111 13 15 chr17 58591170 58591181 -36681470 - L1_Mus3 LINE L1 -1 6637 6627 1 1032 1054 105 0 0 chr17 58591181 58591324 -36681327 - B1_Mus2 SINE Alu 0 147 5 1 1032 4957 111 13 15 chr17 58591324 58592091 -36680560 - L1_Mus3 LINE L1 -12 6626 5861 1 1032 587 156 0 0 chr17 58592097 58592206 -36680445 - Lx2 LINE L1 -519 5358 5250 1 1032 1368 186 7 3 chr17 58592205 58592491 -36680160 + L1_Mur2 LINE L1 4083 4369 -1508 1 1032 203 215 0 15 chr17 58593026 58593092 -36679559 + CT-rich Low_complexity Low_complexity 4 68 0 1 1032 349 307 30 15 chr17 58593120 58593350 -36679301 + CT-rich Low_complexity Low_complexity 1 233 0 1 1032 1222 314 52 10 chr17 58593883 58594285 -36678366 + MTD LTR MaLR 1 419 0 1 1032 795 255 124 41 chr17 58594342 58594608 -36678043 + ORR1B2 LTR MaLR 76 363 -4 1 1032 1507 213 141 5 chr17 58594611 58594994 -36677657 + ORR1B2-int LTR MaLR 1 435 -1074 1 1032 893 223 22 43 chr17 58595119 58595349 -36677302 + URR1B DNA MER1_type 1 225 0 1 1032 1620 212 78 24 chr17 58595574 58595956 -36676695 - MTC LTR MaLR -18 403 1 1 1032 555 323 26 0 chr17 58596349 58596504 -36676147 + ID_B1 SINE B4 35 193 -31 1 1032 387 255 56 14 chr17 58596790 58596933 -36675718 + Lx7 LINE L1 5758 5906 -1790 1 1032 326 253 0 62 chr17 58597972 58598052 -36674599 + ID4_ SINE ID 6 80 -3 1 1032 211 338 71 83 chr17 58598080 58598164 -36674487 + B3 SINE B2 3 85 -131 1 1032 1364 238 75 83 chr17 58598815 58599297 -36673354 - RLTR11A LTR ERVK -30 498 21 1 1032 233 296 174 0 chr17 58599691 58599789 -36672862 + B4 SINE B4 6 120 -172 1 1032 228 135 0 0 chr17 58601087 58601124 -36671527 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 1032 2798 41 9 9 chr17 58601269 58601613 -36671038 - ORR1A1 LTR MaLR -2 344 1 1 1032 204 158 0 0 chr17 58601614 58601652 -36670999 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 1032 739 330 8 17 chr17 58602761 58603001 -36669650 - B4 SINE B4 -49 243 6 1 1032 477 0 0 0 chr17 58603485 58603538 -36669113 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1032 488 81 0 13 chr17 58604668 58604743 -36667908 + (TG)n Simple_repeat Simple_repeat 2 75 0 1 1032 6353 48 4 1 chr17 58604762 58605597 -36667054 + L1Md_F3 LINE L1 5687 6523 -61 1 1032 30 27 0 0 chr17 58605597 58605634 -36667017 + AT_rich Low_complexity Low_complexity 1 37 0 1 1032 351 150 0 0 chr17 58605706 58605766 -36666885 + (T)n Simple_repeat Simple_repeat 1 60 0 1 1032 2567 112 0 28 chr17 58606940 58607334 -36665317 - L1_Mus4 LINE L1 -4 6632 6250 1 1032 491 333 13 54 chr17 58607950 58608099 -36664552 - RSINE1 SINE B4 -20 145 3 1 1032 744 112 17 51 chr17 58608978 58609156 -36663495 + GA-rich Low_complexity Low_complexity 1 172 0 1 1032 21 0 0 0 chr17 58609326 58609347 -36663304 + AT_rich Low_complexity Low_complexity 1 21 0 1 1032 241 163 44 44 chr17 58609429 58609519 -36663132 + A-rich Low_complexity Low_complexity 5 94 0 1 1032 2344 313 60 22 chr17 58609520 58610632 -36662019 - Lx7 LINE L1 -337 7359 6205 1 1032 180 0 0 0 chr17 58610634 58610654 -36661997 + (TA)n Simple_repeat Simple_repeat 1 20 0 1 1032 21 57 0 0 chr17 58611441 58611476 -36661175 + AT_rich Low_complexity Low_complexity 1 35 0 1 1032 223 254 0 0 chr17 58611757 58611812 -36660839 + (CATATA)n Simple_repeat Simple_repeat 5 59 0 1 1032 231 292 0 84 chr17 58611903 58611974 -36660677 + ID4 SINE ID 5 69 -14 1 1032 300 342 70 45 chr17 58612961 58613203 -36659448 + L1M5 LINE L1 2614 2861 -3285 1 1032 252 346 9 45 chr17 58613294 58613406 -36659245 - ID_B1 SINE B4 -19 205 98 1 1032 305 198 25 79 chr17 58613887 58613976 -36658675 + RMER16 LTR ERVK 1 78 -455 1 1032 5148 126 47 7 chr17 58613997 58614827 -36657824 - Lx LINE L1 0 6654 5792 1 1032 8892 150 27 5 chr17 58614827 58617065 -36655586 + Lx LINE L1 4222 6502 -152 1 1032 277 87 0 0 chr17 58617053 58617099 -36655552 + Lx2 LINE L1 6950 6995 -2 1 1032 21 0 0 0 chr17 58617188 58617209 -36655442 + AT_rich Low_complexity Low_complexity 1 21 0 1 1032 675 276 145 28 chr17 58617509 58617833 -36654818 - RLTR9A LTR ERVK -4 364 3 1 1032 7062 51 2 1 chr17 58617895 58618797 -36653854 - L1_Mm LINE L1 -1193 4690 3788 1 1032 1479 47 5 0 chr17 58618797 58618989 -36653662 + L1Md_F2 LINE L1 6390 6582 0 1 1032 741 168 179 36 chr17 58619225 58619443 -36653208 + MT2B LTR ERVL 232 476 -125 1 1032 260 283 76 65 chr17 58619933 58620118 -36652533 - B2_Mm2 SINE B2 -8 187 1 1 1032 229 250 0 0 chr17 58620173 58620217 -36652434 - L1M4c LINE L1 -6252 132 89 1 1032 939 23 0 37 chr17 58621034 58621168 -36651483 + L1Md_F3 LINE L1 6444 6572 -12 1 1032 1633 106 0 0 chr17 58621321 58621547 -36651104 - MTB_Mm LTR MaLR 0 407 182 1 1032 347 226 69 19 chr17 58621483 58621699 -36650952 + RMER17D LTR ERVK 247 473 -416 1 1032 7285 83 20 5 chr17 58621707 58623261 -36649390 - L1_Mus2 LINE L1 0 6566 4983 1 1032 1378 128 0 0 chr17 58623276 58623472 -36649179 - MTB LTR MaLR -204 196 1 1 1032 356 349 66 62 chr17 58623721 58623767 -36648884 - B3 SINE B2 -1 215 167 1 1032 216 97 0 0 chr17 58623767 58623798 -36648853 + (TATG)n Simple_repeat Simple_repeat 4 34 0 1 1032 714 82 0 0 chr17 58623798 58623896 -36648755 + (GA)n Simple_repeat Simple_repeat 1 98 0 1 1032 418 305 56 43 chr17 58623896 58624059 -36648592 - B3A SINE B2 -50 166 4 1 1032 560 226 76 49 chr17 58624074 58624218 -36648433 - B1_Mur1 SINE Alu -1 148 1 2 1032 270 250 81 126 chr17 58624218 58624279 -36648372 - MT2B LTR ERVL -442 159 107 2 1032 1221 78 0 0 chr17 58624441 58624607 -36648044 + (TCTCCC)n Simple_repeat Simple_repeat 4 169 0 2 1032 363 23 0 0 chr17 58624619 58624663 -36647988 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1032 429 320 70 70 chr17 58625859 58626131 -36646520 + B4 SINE B4 3 274 -18 2 1032 537 16 0 0 chr17 58626172 58626234 -36646417 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 1032 604 264 130 12 chr17 58626549 58626718 -36645933 - B3 SINE B2 -25 191 3 2 1032 24113 110 64 91 chr17 58627115 58632544 -36640107 + L1_Mur1 LINE L1 13 5631 -255 2 1032 2557 136 38 2 chr17 58632545 58632965 -36639686 + Lx3_Mus LINE L1 6567 7001 -8 2 1032 508 292 94 14 chr17 58633288 58633576 -36639075 + L1M4 LINE L1 5433 5743 -441 2 1032 266 306 10 55 chr17 58634534 58634659 -36637992 + B1F2 SINE Alu 1 121 -28 2 1032 299 143 0 31 chr17 58634918 58634983 -36637668 + (CATATA)n Simple_repeat Simple_repeat 1 63 0 2 1032 225 232 0 0 chr17 58634997 58635066 -36637585 + GA-rich Low_complexity Low_complexity 2 70 0 2 1032 268 328 79 28 chr17 58635174 58635529 -36637122 + L1M5 LINE L1 5516 5888 -291 2 1032 5227 250 42 11 chr17 58636358 58638159 -36634492 - Lx5 LINE L1 -95 6955 5087 2 1032 2642 170 144 2 chr17 58638168 58638739 -36633912 - RMER6C LTR ERVK -38 652 1 2 1032 1156 176 5 9 chr17 58638739 58638962 -36633689 - RMER6-int LTR ERVK 0 3177 2956 2 1032 1348 55 0 96 chr17 58639076 58639295 -36633356 - L1_Mus2 LINE L1 -1 6565 6368 2 1032 1792 213 23 30 chr17 58639295 58639532 -36633119 - RMER6-int LTR ERVK -210 2967 2735 2 1032 3246 59 0 16 chr17 58639532 58639963 -36632688 - L1Md_F2 LINE L1 0 6582 6159 2 1032 1792 213 23 30 chr17 58639963 58640160 -36632491 - RMER6-int LTR ERVK -443 2734 2536 2 1032 288 70 0 0 chr17 58640160 58640203 -36632448 + (TTTTTG)n Simple_repeat Simple_repeat 5 47 0 2 1032 3010 196 34 5 chr17 58640210 58640827 -36631824 - RMER6-int LTR ERVK -2542 635 1 2 1032 1065 196 2 18 chr17 58640829 58641048 -36631603 - RMER6C LTR ERVK -2 688 471 2 1032 827 228 67 56 chr17 58641328 58641597 -36631054 - RMER6C LTR ERVK -210 480 209 2 1032 3733 206 28 10 chr17 58641597 58642469 -36630182 - Lx5 LINE L1 -830 5047 4161 2 1032 229 390 11 0 chr17 58642617 58642712 -36629939 + ID_B1 SINE B4 7 102 -122 2 1032 332 169 0 13 chr17 58642892 58642970 -36629681 + (TA)n Simple_repeat Simple_repeat 2 78 0 2 1032 2365 123 21 31 chr17 58642978 58643397 -36629254 - RLTR9F LTR ERVK 0 415 1 2 1032 385 354 25 123 chr17 58643792 58644027 -36628624 + B4A SINE B4 3 214 -78 2 1032 930 44 0 35 chr17 58644092 58644234 -36628417 + L1Md_F3 LINE L1 6447 6583 -1 2 1032 13915 123 20 15 chr17 58644563 58646616 -36626035 - L1_Mur1 LINE L1 -996 4890 2819 2 1032 549 0 0 0 chr17 58646616 58646677 -36625974 + (TTC)n Simple_repeat Simple_repeat 2 62 0 2 1032 13915 123 20 15 chr17 58646677 58646705 -36625946 - L1_Mur1 LINE L1 -3068 2818 2804 2 1032 1155 68 7 0 chr17 58646705 58646852 -36625799 - B1_Mus1 SINE Alu 0 148 1 2 1032 13915 123 20 15 chr17 58646852 58647011 -36625640 - L1_Mur1 LINE L1 -3083 2803 2655 2 1032 306 0 0 0 chr17 58647011 58647045 -36625606 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 2 1032 13915 123 20 15 chr17 58647045 58647181 -36625470 - L1_Mur1 LINE L1 -3232 2654 2502 2 1032 7236 128 65 11 chr17 58647180 58648996 -36623655 + Lx3B LINE L1 5056 6973 0 2 1032 600 182 0 0 chr17 58649284 58649416 -36623235 + T-rich Low_complexity Low_complexity 1 132 0 2 1032 205 362 76 21 chr17 58649435 58649579 -36623072 - L2 LINE L2 -776 2643 2492 2 1032 216 0 0 0 chr17 58649585 58649609 -36623042 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1032 1832 74 66 0 chr17 58649623 58649879 -36622772 - L1_Mus1 LINE L1 0 6567 6295 2 1032 5074 97 5 7 chr17 58649879 58650630 -36622021 + L1Md_F3 LINE L1 4785 5574 -303 2 1032 3846 37 7 0 chr17 58650630 58651091 -36621560 - L1Md_F3 LINE L1 -3 6581 6118 2 1032 4632 29 0 0 chr17 58651091 58651581 -36621070 + L1Md_F3 LINE L1 5575 6117 -467 2 1032 216 0 0 0 chr17 58651661 58651685 -36620966 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 1032 549 306 41 9 chr17 58651777 58651974 -36620677 + B3A SINE B2 5 211 -5 2 1032 449 327 0 59 chr17 58652006 58652175 -36620476 + RSINE1 SINE B4 3 161 -4 2 1032 508 281 49 21 chr17 58652237 58652379 -36620272 + B3 SINE B2 6 151 -65 2 1032 686 259 146 21 chr17 58653897 58654232 -36618419 + MTEb LTR MaLR 1 377 -2 2 1032 646 293 17 85 chr17 58654516 58654751 -36617900 + B4 SINE B4 5 223 -69 2 1032 221 205 0 0 chr17 58654816 58654855 -36617796 + RSINE1 SINE B4 81 119 -46 2 1032 21890 55 5 1 chr17 58655041 58657864 -36614787 + L1Md_F3 LINE L1 2752 5585 -298 2 1032 8193 44 0 1 chr17 58657865 58658864 -36613787 + L1Md_F3 LINE L1 5587 6584 0 2 1032 379 335 130 28 chr17 58658927 58659142 -36613509 + B4A SINE B4 55 291 -1 2 1032 591 128 32 0 chr17 58659323 58659417 -36613234 - BGLII_A LTR ERVK 0 445 349 2 1032 462 130 0 0 chr17 58659934 58660003 -36612648 + L1Md_F2 LINE L1 269 337 -6282 2 1032 33141 74 0 1 chr17 58659996 58664930 -36607721 + L1Md_F2 LINE L1 563 5589 -297 2 1032 7924 57 0 1 chr17 58664931 58665915 -36606736 + L1Md_F2 LINE L1 5591 6573 -12 2 1032 1034 88 0 7 chr17 58666129 58666266 -36606385 + B1_Mm SINE Alu 2 137 -10 2 1032 207 0 0 0 chr17 58666266 58666289 -36606362 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1032 218 292 0 0 chr17 58666293 58666341 -36606310 - B4A SINE B4 -217 75 28 2 1032 255 31 0 0 chr17 58667017 58667049 -36605602 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 2 1032 589 332 45 45 chr17 58667100 58667302 -36605349 - B4A SINE B4 0 292 91 2 1032 1201 291 100 5 chr17 58667305 58667675 -36604976 + MTD LTR MaLR 1 405 -14 2 1032 239 345 81 0 chr17 58667689 58667776 -36604875 - B4A SINE B4 -198 94 1 2 1032 280 106 15 29 chr17 58668101 58668169 -36604482 + T-rich Low_complexity Low_complexity 4 70 0 2 1032 453 276 109 42 chr17 58668176 58668336 -36604315 + RMER15 LTR ERVL 370 531 -44 2 1032 429 20 0 0 chr17 58668336 58668386 -36604265 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1032 468 0 0 0 chr17 58668386 58668437 -36604214 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 1032 453 276 109 42 chr17 58668437 58668468 -36604183 + RMER15 LTR ERVL 532 574 -1 2 1032 3670 81 6 34 chr17 58668723 58669257 -36603394 - MURVY-LTR LTR ERV1 0 519 1 2 1032 2474 78 26 9 chr17 58669398 58669692 -36602959 - IAPEY2_LTR LTR ERVK -3 354 57 2 1032 1949 56 0 4 chr17 58669692 58669941 -36602710 - L1Md_F2 LINE L1 -12 6570 6323 2 1032 2474 78 26 9 chr17 58669941 58669994 -36602657 - IAPEY2_LTR LTR ERVK -301 56 1 2 1032 1402 76 16 0 chr17 58670196 58670381 -36602270 - B2_Mm2 SINE B2 -6 189 2 2 1032 1089 266 81 22 chr17 58670703 58671061 -36601590 - MTEb LTR MaLR 0 379 1 2 1032 1027 279 20 129 chr17 58671285 58671661 -36600990 - ORR1E LTR MaLR -8 371 4 2 1032 619 272 73 23 chr17 58673908 58674085 -36598566 + B4 SINE B4 104 289 -3 2 1032 5224 19 0 0 chr17 58674100 58674734 -36597917 - L1Md_A LINE L1 -583 5300 4667 2 1032 2427 14 0 0 chr17 58674732 58675019 -36597632 + L1Md_A LINE L1 5300 5586 -297 2 1032 8552 25 0 0 chr17 58675020 58676033 -36596618 + L1Md_A LINE L1 5588 6582 0 2 1032 4133 171 12 56 chr17 58676429 58677199 -36595452 + L1_Mus4 LINE L1 391 1164 -5493 2 1032 1161 68 0 0 chr17 58677199 58677346 -36595305 + B1_Mus1 SINE Alu 2 148 0 2 1032 20790 167 28 54 chr17 58677346 58679328 -36593323 + L1_Mus4 LINE L1 1162 3166 -2717 2 1032 341 22 0 21 chr17 58679328 58679375 -36593276 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 2 1032 20790 166 28 50 chr17 58679375 58680826 -36591825 + L1_Mus4 LINE L1 3167 4634 -1249 2 1032 261 0 0 0 chr17 58680826 58680855 -36591796 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2 1032 20790 166 28 50 chr17 58680855 58681188 -36591463 + L1_Mus4 LINE L1 4635 4760 -1123 2 1032 8758 14 4 0 chr17 58681188 58682180 -36590471 + L1Md_A LINE L1 5587 6582 0 2 1032 20790 143 66 75 chr17 58682180 58684027 -36588624 + L1_Mus4 LINE L1 4761 6610 -26 2 1032 9114 15 0 0 chr17 58684023 58685156 -36587495 - L1Md_T LINE L1 -651 5931 4799 2 1032 5611 30 1 0 chr17 58685156 58685814 -36586837 + L1Md_T LINE L1 5922 6580 -2 2 1032 194 151 38 0 chr17 58685866 58685919 -36586732 + A-rich Low_complexity Low_complexity 4 58 0 2 1032 305 162 68 40 chr17 58686064 58686212 -36586439 + (TA)n Simple_repeat Simple_repeat 2 153 0 2 1032 281 261 60 30 chr17 58686936 58687070 -36585581 + L1_Rod LINE L1 5512 5649 -198 2 1032 5767 122 17 30 chr17 58687848 58689439 -36583212 - L1VL4 LINE L1 -2188 1371 1 2 1032 1454 21 0 5 chr17 58689950 58690137 -36582514 - L1Md_F3 LINE L1 -21 6563 6378 2 1032 944 70 0 8 chr17 58690385 58690514 -36582137 + L1_Mus2 LINE L1 6331 6458 -108 2 1032 463 252 9 0 chr17 58690535 58690642 -36582009 + ORR1D2 LTR MaLR 255 362 -8 2 1032 258 267 27 0 chr17 58690688 58690763 -36581888 + (CATATA)n Simple_repeat Simple_repeat 3 79 0 2 1032 33814 35 0 0 chr17 58690897 58696324 -36576327 + L1Md_T LINE L1 66 5589 -297 2 1032 8912 9 0 0 chr17 58696324 58697337 -36575314 + L1Md_T LINE L1 5590 6585 0 2 1032 240 35 0 0 chr17 58698285 58698314 -36574337 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 2 1032 215 312 62 12 chr17 58698421 58698502 -36574149 - B4A SINE B4 -205 87 3 2 1032 305 247 24 0 chr17 58699136 58699221 -36573430 + CT-rich Low_complexity Low_complexity 2 88 0 2 1032 499 317 77 12 chr17 58700160 58700329 -36572322 - ID_B1 SINE B4 0 224 45 2 1032 4753 183 38 25 chr17 58701216 58702112 -36570539 - RMER13B LTR ERVK 0 908 1 2 1032 364 335 59 58 chr17 58702140 58702439 -36570212 + B4A SINE B4 12 277 -15 2 1032 835 342 8 19 chr17 58702680 58702945 -36569706 + B4 SINE B4 27 288 -4 2 1032 331 309 114 24 chr17 58703048 58703214 -36569437 + MER82 DNA MER2_type 10 190 -463 2 1032 523 305 43 0 chr17 58703695 58703836 -36568815 + B3A SINE B2 10 156 -42 2 1032 477 0 0 0 chr17 58703841 58703894 -36568757 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1032 251 318 26 53 chr17 58704000 58704189 -36568462 - L1MC3 LINE L1 -398 7387 7204 2 1032 541 308 29 17 chr17 58704281 58704456 -36568195 - B3 SINE B2 -2 214 38 2 1032 612 360 10 33 chr17 58704779 58705078 -36567573 + B4 SINE B4 1 292 0 2 1032 321 308 12 0 chr17 58705096 58705268 -36567383 + (CATATA)n Simple_repeat Simple_repeat 3 176 0 2 1032 739 307 71 29 chr17 58705411 58705572 -36567079 + L1MC3 LINE L1 7231 7391 -394 2 1032 2110 120 9 21 chr17 58705572 58705903 -36566748 + ORR1A2 LTR MaLR 1 327 0 2 1032 739 307 71 29 chr17 58705903 58706251 -36566400 + L1MC3 LINE L1 7392 7761 -24 2 1032 260 342 42 59 chr17 58706497 58706615 -36566036 + RSINE1 SINE B4 6 121 -44 2 1032 1209 91 3 0 chr17 58706718 58707017 -36565634 + (TAG)n Simple_repeat Simple_repeat 1 300 0 2 1032 525 247 42 91 chr17 58707147 58707312 -36565339 + RSINE1 SINE B4 9 165 0 2 1032 354 98 0 0 chr17 58707314 58707365 -36565286 + (CACG)n Simple_repeat Simple_repeat 1 51 0 2 1032 441 330 52 16 chr17 58707380 58707571 -36565080 + B3 SINE B2 16 213 -3 2 1032 390 282 31 31 chr17 58708064 58708225 -36564426 - SRV_MM-int LTR ERVK -4594 1573 1413 2 1032 1098 82 0 7 chr17 58708356 58708504 -36564147 + B1_Mus2 SINE Alu 1 147 0 3 1032 22 0 0 0 chr17 58709174 58709196 -36563455 + AT_rich Low_complexity Low_complexity 1 22 0 3 1032 848 173 0 63 chr17 58710086 58710277 -36562374 - Lx LINE L1 0 6654 6476 3 1032 522 99 0 0 chr17 58710277 58710368 -36562283 + (CA)n Simple_repeat Simple_repeat 2 92 0 3 1032 600 84 0 0 chr17 58710371 58710454 -36562197 + (TA)n Simple_repeat Simple_repeat 2 84 0 3 1032 257 104 39 59 chr17 58710463 58710514 -36562137 + MT2B2 LTR ERVL 535 584 0 3 1032 333 0 0 0 chr17 58710813 58710850 -36561801 + (TGGA)n Simple_repeat Simple_repeat 4 40 0 3 1032 276 205 0 0 chr17 58710850 58710918 -36561733 + GA-rich Low_complexity Low_complexity 12 79 0 3 1032 335 352 47 33 chr17 58711284 58711434 -36561217 + MTEa LTR MaLR 1 152 -227 3 1032 2746 172 50 16 chr17 58711541 58712107 -36560544 - RMER4B LTR ERVK 0 585 1 3 1032 392 334 38 37 chr17 58712873 58713046 -36559605 + B3 SINE B2 12 198 0 3 1032 684 0 0 0 chr17 58713578 58713654 -36558997 + (TTC)n Simple_repeat Simple_repeat 1 76 0 3 1032 2898 70 18 18 chr17 58715175 58715569 -36557082 + MTA_Mm LTR MaLR 3 396 0 3 1032 1218 58 0 0 chr17 58715807 58715961 -36556690 - L1Md_T LINE L1 -12 6570 6417 3 1032 1114 76 7 7 chr17 58716021 58716167 -36556484 - B1_Mus1 SINE Alu -1 147 2 3 1032 726 331 70 31 chr17 58716235 58716523 -36556128 - MTE2a LTR MaLR -33 346 53 3 1032 347 57 0 36 chr17 58719877 58719932 -36552719 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 3 1033 1154 50 0 0 chr17 58720532 58720671 -36551980 - B1_Mus2 SINE Alu -8 139 1 3 1033 460 95 0 0 chr17 58721174 58721248 -36551403 - L1_Mus3 LINE L1 -6 6632 6559 3 1033 1011 316 18 79 chr17 58721265 58721646 -36551005 - MTE2b LTR MaLR -4 375 18 3 1033 1078 205 51 61 chr17 58722216 58722520 -36550131 + RLTR20A2 LTR ERVK 14 311 -267 3 1033 440 187 28 18 chr17 58723171 58723280 -36549371 + MYSERV6-int LTR ERVK 4286 4395 -4564 3 1033 2109 204 25 0 chr17 58723287 58723688 -36548963 + RMER6-int LTR ERVK 2699 3109 -68 3 1033 1335 90 51 0 chr17 58723690 58723868 -36548783 + B2_Mm2 SINE B2 1 187 -8 3 1033 624 184 8 0 chr17 58723879 58724004 -36548647 + RMER6-int LTR ERVK 3051 3176 -1 3 1033 458 179 60 86 chr17 58724006 58724122 -36548529 + RMER6C LTR ERVK 2 114 -576 3 1033 1162 186 90 18 chr17 58724119 58724398 -36548253 + RMER6C LTR ERVK 378 676 -14 3 1033 494 312 28 0 chr17 58724821 58724962 -36547689 - RSINE1 SINE B4 -18 147 3 3 1033 692 23 12 0 chr17 58725665 58725751 -36546900 + (TC)n Simple_repeat Simple_repeat 1 87 0 3 1033 210 125 0 0 chr17 58726507 58726539 -36546112 + (TCTCTG)n Simple_repeat Simple_repeat 2 33 0 3 1033 879 139 0 0 chr17 58726540 58726720 -36545931 + (TC)n Simple_repeat Simple_repeat 1 180 0 3 1033 586 299 128 16 chr17 58726721 58726908 -36545743 - B3 SINE B2 -8 208 1 3 1033 351 330 36 0 chr17 58727067 58727179 -36545472 + MT2A LTR ERVL 1 116 -417 3 1033 199 161 18 18 chr17 58727364 58727421 -36545230 + CT-rich Low_complexity Low_complexity 1 57 0 3 1033 200 288 0 33 chr17 58727809 58727870 -36544781 + CT-rich Low_complexity Low_complexity 1 59 0 3 1033 366 204 58 116 chr17 58728613 58728768 -36543883 + RMER17C-int LTR ERVK 379 524 -2714 3 1033 833 298 38 46 chr17 58728697 58729042 -36543609 + RodERV21-int LTR ERV1 684 1025 -3966 3 1033 5352 271 33 23 chr17 58729137 58730575 -36542076 + RodERV21-int LTR ERV1 1267 2718 -2273 3 1033 4055 284 48 38 chr17 58730709 58733061 -36539590 - SRV_MM-int LTR ERVK -2746 3421 1177 3 1033 276 100 0 0 chr17 58735078 58735118 -36537533 + (A)n Simple_repeat Simple_repeat 1 40 0 3 1033 1293 237 40 0 chr17 58735118 58735392 -36537259 - SRV_MM-int LTR ERVK -2094 1220 936 3 1033 645 228 78 26 chr17 58735407 58735560 -36537091 - SRV_MM-int LTR ERVK -2458 856 696 3 1033 588 269 40 73 chr17 58735574 58735903 -36536748 - SRV_MM-int LTR ERVK -2995 319 2 3 1033 2194 161 35 54 chr17 58735904 58736332 -36536319 - RLTR9B2 LTR ERVK 0 420 1 3 1033 2181 330 34 25 chr17 58736338 58737319 -36535332 + RodERV21-int LTR ERV1 3804 4793 -198 3 1033 917 49 8 0 chr17 58737693 58737816 -36534835 + (TC)n Simple_repeat Simple_repeat 1 124 0 3 1033 492 18 0 0 chr17 58738812 58738869 -36533782 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 1033 1044 278 91 18 chr17 58738950 58739291 -36533360 - MTE2a LTR MaLR -6 373 8 3 1033 488 111 12 0 chr17 58739320 58739401 -36533250 + (GGATG)n Simple_repeat Simple_repeat 2 83 0 3 1033 24 77 0 0 chr17 58739988 58740040 -36532611 + AT_rich Low_complexity Low_complexity 1 52 0 3 1033 527 0 16 0 chr17 58740174 58740237 -36532414 + (TC)n Simple_repeat Simple_repeat 2 65 0 3 1033 432 86 0 0 chr17 58740418 58740488 -36532163 + (TG)n Simple_repeat Simple_repeat 1 70 0 3 1033 847 247 41 5 chr17 58740490 58740710 -36531941 - Lx8 LINE L1 -526 6947 6720 3 1033 991 200 159 6 chr17 58740889 58741122 -36531529 - MTD LTR MaLR -9 410 114 3 1033 482 46 0 15 chr17 58741256 58741322 -36531329 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 1033 721 224 7 14 chr17 58741348 58741493 -36531158 - B1_Mus2 SINE Alu -1 146 3 3 1033 288 0 0 0 chr17 58743231 58743263 -36529388 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1033 452 320 88 7 chr17 58743333 58743481 -36529170 - RSINE1 SINE B4 -4 161 2 3 1033 279 243 68 0 chr17 58743483 58743557 -36529094 - B4 SINE B4 -67 225 147 3 1033 1213 74 0 0 chr17 58743883 58744031 -36528620 - B1_Mus1 SINE Alu 0 148 1 3 1033 515 228 0 0 chr17 58744122 58744214 -36528437 - B1_Mur1 SINE Alu -8 141 50 3 1033 1924 141 37 3 chr17 58744479 58744777 -36527874 - RLTR10E LTR ERVK -3 308 1 3 1033 448 364 42 0 chr17 58744941 58745106 -36527545 - B4A SINE B4 -120 172 1 3 1033 2299 284 81 62 chr17 58745514 58746358 -36526293 - RMER13A LTR ERVK 0 860 1 3 1033 351 0 0 0 chr17 58746476 58746515 -36526136 + (TTA)n Simple_repeat Simple_repeat 1 39 0 3 1033 1143 81 0 0 chr17 58746763 58746923 -36525728 + (TTTC)n Simple_repeat Simple_repeat 2 161 0 3 1033 365 278 26 44 chr17 58746933 58747046 -36525605 - B3 SINE B2 -14 202 92 3 1033 381 75 0 0 chr17 58747046 58747099 -36525552 + (TTCC)n Simple_repeat Simple_repeat 1 53 0 3 1033 401 257 29 0 chr17 58747105 58747210 -36525441 - B1_Mur1 SINE Alu -1 148 41 3 1033 3845 194 33 15 chr17 58747763 58748486 -36524165 - Lx4B LINE L1 -4 7054 6319 3 1033 535 312 97 19 chr17 58748742 58748948 -36523703 - B4A SINE B4 -59 233 12 3 1033 396 291 146 0 chr17 58749068 58749171 -36523480 - B1_Mur2 SINE Alu -31 118 1 3 1033 204 109 14 111 chr17 58749189 58749261 -36523390 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 3 1033 266 336 8 108 chr17 58749350 58749480 -36523171 - MTEa LTR MaLR -260 119 3 3 1033 1137 313 71 45 chr17 58749501 58750299 -36522352 + MYSERV-int LTR ERVK 3941 4627 -1923 3 1033 233 360 13 0 chr17 58750449 58750524 -36522127 - B3A SINE B2 -122 76 1 3 1033 516 291 39 51 chr17 58750556 58750712 -36521939 - B3A SINE B2 -42 156 3 3 1033 351 0 0 0 chr17 58751159 58751198 -36521453 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1033 207 0 0 0 chr17 58751217 58751240 -36521411 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1033 357 221 87 0 chr17 58751876 58751959 -36520692 + PB1D10 SINE Alu 24 123 -4 3 1033 618 82 0 0 chr17 58751993 58752078 -36520573 + (GA)n Simple_repeat Simple_repeat 2 86 0 3 1033 722 264 90 25 chr17 58752102 58752424 -36520227 + Charlie5 DNA MER1_type 2108 2450 -174 3 1033 325 279 14 6 chr17 58752426 58752514 -36520137 + B4 SINE B4 1 86 -206 3 1033 219 204 0 0 chr17 58752518 58752572 -36520079 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 3 1033 862 265 5 5 chr17 58752574 58752760 -36519891 - MT2A LTR ERVL -76 457 272 3 1033 384 22 0 0 chr17 58752781 58752826 -36519825 + (TCC)n Simple_repeat Simple_repeat 2 46 0 3 1033 189 74 0 0 chr17 58752844 58752871 -36519780 + (CAG)n Simple_repeat Simple_repeat 1 27 0 3 1033 204 40 0 0 chr17 58752936 58752961 -36519690 + (CAG)n Simple_repeat Simple_repeat 3 27 0 3 1033 276 358 73 18 chr17 58752964 58753036 -36519615 - MT2A LTR ERVL -302 231 1 3 1033 426 292 88 0 chr17 58753036 58753183 -36519468 - MTEa LTR MaLR -219 160 1 3 1033 668 283 7 20 chr17 58753330 58753478 -36519173 - RSINE1 SINE B4 -11 154 9 3 1033 331 336 50 80 chr17 58753520 58753821 -36518830 + B4A SINE B4 1 292 0 3 1033 378 367 0 0 chr17 58753847 58753997 -36518654 + (CA)n Simple_repeat Simple_repeat 1 150 0 3 1033 506 241 128 58 chr17 58754372 58754544 -36518107 - B3 SINE B2 -28 188 5 3 1033 482 312 34 14 chr17 58754552 58754698 -36517953 - ID_B1 SINE B4 -73 151 3 3 1033 399 296 195 0 chr17 58755466 58755635 -36517016 - B4A SINE B4 0 292 91 3 1033 711 178 0 0 chr17 58755639 58755774 -36516877 + CT-rich Low_complexity Low_complexity 3 137 0 3 1033 224 147 246 14 chr17 58755794 58755863 -36516788 - B4 SINE B4 -206 86 2 3 1033 4946 149 20 50 chr17 58755929 58756919 -36515732 - L1_Mur1 LINE L1 -1857 4029 3069 3 1033 1026 72 7 0 chr17 58756907 58757045 -36515606 - MusHAL1 LINE L1 -1965 747 609 3 1033 204 222 0 0 chr17 58757063 58757117 -36515534 + T-rich Low_complexity Low_complexity 3 56 0 3 1033 315 296 55 21 chr17 58757323 58757468 -36515183 - Lx8 LINE L1 -321 7152 7003 3 1033 1716 66 0 9 chr17 58757480 58757710 -36514941 - MTB LTR MaLR 0 400 173 3 1033 983 282 43 116 chr17 58757827 58757903 -36514748 - MTE2a LTR MaLR -9 370 294 3 1033 215 61 30 0 chr17 58757903 58757936 -36514715 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 3 1033 983 282 43 116 chr17 58757936 58758256 -36514395 - MTE2a LTR MaLR -86 293 3 3 1033 812 286 37 60 chr17 58759967 58760265 -36512386 - B4 SINE B4 -1 291 1 3 1033 379 341 183 0 chr17 58760899 58761145 -36511506 - MT2A LTR ERVL -6 527 237 3 1033 382 336 0 9 chr17 58761134 58761239 -36511412 - MTEa LTR MaLR -263 116 13 3 1033 184 255 0 28 chr17 58761265 58761374 -36511277 + (CATA)n Simple_repeat Simple_repeat 1 106 0 3 1033 373 218 6 49 chr17 58761393 58761576 -36511075 + (CATA)n Simple_repeat Simple_repeat 4 178 0 3 1033 452 220 23 6 chr17 58761591 58761765 -36510886 + (CATA)n Simple_repeat Simple_repeat 4 180 0 3 1033 1348 210 15 4 chr17 58761798 58762066 -36510585 + ORR1B2 LTR MaLR 38 308 -59 3 1033 2259 154 11 0 chr17 58762067 58762444 -36510207 + L1_Mm LINE L1 4558 4938 -945 3 1033 4494 50 9 2 chr17 58762452 58762977 -36509674 - L1Md_F2 LINE L1 0 6582 6054 4 1033 3244 27 3 0 chr17 58762977 58763353 -36509298 + L1Md_F2 LINE L1 5669 6045 -537 4 1033 5155 116 51 0 chr17 58763350 58764117 -36508534 + L1_Mm LINE L1 4923 5728 -155 3 1033 456 302 167 5 chr17 58764333 58764537 -36508114 - 7SK RNA RNA -92 239 3 4 1033 414 0 0 0 chr17 58765091 58765137 -36507514 + (TTTTA)n Simple_repeat Simple_repeat 3 48 0 4 1033 460 242 99 50 chr17 58765188 58765349 -36507302 + RMER5 LTR ERV1 34 202 -332 4 1033 494 239 256 15 chr17 58765458 58765790 -36506861 + L1_Mur3 LINE L1 3192 3603 -2277 4 1033 1725 48 5 0 chr17 58765792 58766001 -36506650 - L1Md_F2 LINE L1 0 6582 6373 4 1033 666 263 42 16 chr17 58766002 58766195 -36506456 + RMER5 LTR ERV1 337 534 0 4 1033 408 329 65 90 chr17 58766363 58766722 -36505929 + RLTR26 LTR ERVK 172 574 -53 4 1033 426 244 13 51 chr17 58766866 58766992 -36505659 + B1_Mur4 SINE Alu 22 148 -1 4 1033 216 211 58 0 chr17 58766998 58767050 -36505601 + A-rich Low_complexity Low_complexity 3 57 0 4 1033 923 360 42 29 chr17 58767541 58768065 -36504586 + MT2A LTR ERVL 3 533 0 4 1033 341 308 22 29 chr17 58768307 58768444 -36504207 + MTD LTR MaLR 1 136 -283 4 1033 1990 221 67 40 chr17 58768444 58768816 -36503835 - Lx7 LINE L1 -1410 6286 5894 4 1033 543 43 0 0 chr17 58768816 58768886 -36503765 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 4 1033 1990 221 67 40 chr17 58768886 58769113 -36503538 - Lx7 LINE L1 -1803 5893 5671 4 1033 2109 138 20 15 chr17 58769128 58769462 -36503189 + ORR1A2 LTR MaLR 18 362 -8 4 1033 2878 67 97 3 chr17 58769462 58769824 -36502827 - MTA_Mm LTR MaLR 0 396 1 4 1033 7898 205 43 38 chr17 58769833 58771786 -36500865 + ORR1A2-int LTR MaLR 1 1963 0 4 1033 600 27 0 0 chr17 58772070 58772144 -36500507 + (TG)n Simple_repeat Simple_repeat 1 74 0 4 1033 450 0 0 0 chr17 58772144 58772193 -36500458 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 1033 1204 236 53 21 chr17 58772194 58772475 -36500176 - B4 SINE B4 -2 290 1 4 1033 272 221 14 14 chr17 58773024 58773093 -36499558 + L1MA6 LINE L1 5911 5979 -321 4 1033 440 208 0 0 chr17 58773288 58773365 -36499286 + B3A SINE B2 2 78 -120 4 1033 2006 164 2 153 chr17 58773458 58773927 -36498724 - RMER10B LTR ERVL 0 398 1 4 1033 481 178 19 47 chr17 58774277 58774383 -36498268 - MTB LTR MaLR -2 398 296 4 1033 357 233 40 14 chr17 58774951 58775025 -36497626 - B4 SINE B4 -169 123 48 4 1033 186 189 0 0 chr17 58775647 58775684 -36496967 + T-rich Low_complexity Low_complexity 2 38 0 4 1033 251 277 245 0 chr17 58776091 58776221 -36496430 - ID_B1 SINE B4 -60 164 3 4 1033 442 274 126 94 chr17 58776270 58776393 -36496258 - RLTR9A LTR ERVK 0 368 258 4 1033 324 0 0 0 chr17 58776393 58776429 -36496222 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4 1033 1174 59 0 0 chr17 58776429 58776565 -36496086 - B1_Mm SINE Alu -11 136 1 4 1033 442 274 126 94 chr17 58776565 58776790 -36495861 - RLTR9A LTR ERVK -111 257 9 4 1033 280 302 72 54 chr17 58777142 58777332 -36495319 - RMER13B LTR ERVK -221 737 545 4 1033 456 314 171 6 chr17 58777648 58777818 -36494833 + B4A SINE B4 93 290 -2 4 1033 4139 115 5 26 chr17 58778396 58779038 -36493613 + RLTR5_Mm LTR ERV1 1 628 0 4 1033 213 245 20 0 chr17 58780160 58780209 -36492442 - B3A SINE B2 -148 50 1 4 1033 387 224 57 65 chr17 58780209 58780310 -36492341 + MTD LTR MaLR 281 380 -39 4 1033 226 259 0 0 chr17 58780290 58780344 -36492307 + MamRep1161 DNA TcMar 501 554 -403 4 1033 531 194 46 0 chr17 58780342 58780450 -36492201 + ORR1D1 LTR MaLR 262 374 0 4 1033 472 244 101 18 chr17 58780450 58780667 -36491984 + L1MA4A LINE L1 5695 5929 -374 4 1033 351 0 0 0 chr17 58780753 58780792 -36491859 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1033 313 170 425 0 chr17 58781635 58781729 -36490922 + B1_Mur4 SINE Alu 12 145 -5 4 1033 1609 169 57 83 chr17 58781828 58782023 -36490628 + RMER10B LTR ERVL 3 191 -207 4 1033 929 9 0 9 chr17 58782023 58782134 -36490517 + (TCTCCC)n Simple_repeat Simple_repeat 6 115 0 4 1033 1609 169 57 83 chr17 58782134 58782345 -36490306 + RMER10B LTR ERVL 192 397 -1 4 1033 1998 147 66 87 chr17 58782414 58782853 -36489798 - RLTR23 LTR ERV1 0 430 1 4 1033 566 210 8 39 chr17 58782907 58783036 -36489615 - MTD LTR MaLR 0 419 295 4 1033 297 0 0 0 chr17 58783605 58783638 -36489013 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 4 1033 297 221 0 0 chr17 58783933 58784001 -36488650 + CT-rich Low_complexity Low_complexity 2 69 0 4 1033 28928 108 4 8 chr17 58784007 58789539 -36483112 - L1_Mus1 LINE L1 0 6567 1073 4 1033 2335 190 6 0 chr17 58789538 58790016 -36482635 - L1_Mus1 LINE L1 -5411 1205 725 4 1033 319 301 15 8 chr17 58790018 58790152 -36482499 - L1_Mus1 LINE L1 -5807 809 675 4 1033 341 245 39 19 chr17 58790210 58790384 -36482267 - L1VL1 LINE L1 -6032 390 101 4 1033 446 310 94 59 chr17 58790552 58790806 -36481845 - MTD LTR MaLR -131 290 28 4 1033 239 317 116 64 chr17 58791195 58791367 -36481284 - RLTR23 LTR ERV1 0 430 250 4 1033 322 219 122 61 chr17 58792254 58792385 -36480266 - L1MC5 LINE L1 -552 7409 7271 4 1033 734 279 5 57 chr17 58792474 58792683 -36479968 + B3A SINE B2 1 198 0 4 1033 685 232 27 22 chr17 58792775 58792960 -36479691 - B2_Mm2 SINE B2 -9 186 1 4 1033 215 250 0 0 chr17 58793276 58793320 -36479331 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 4 1033 246 288 151 111 chr17 58793320 58793492 -36479159 - B4 SINE B4 0 292 114 4 1033 252 295 52 10 chr17 58793405 58793501 -36479150 - PB1D9 SINE Alu -1 119 20 4 1033 306 0 0 0 chr17 58793654 58793688 -36478963 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1033 227 367 27 9 chr17 58793764 58793874 -36478777 - B4A SINE B4 -74 218 107 4 1033 566 61 30 20 chr17 58794552 58794653 -36477998 + (TTTTC)n Simple_repeat Simple_repeat 2 103 0 4 1033 1367 248 58 3 chr17 58794744 58795072 -36477579 - ORR1D2 LTR MaLR -24 346 1 4 1033 227 376 64 17 chr17 58795786 58795959 -36476692 - MER106B DNA MER1_type -4 1055 875 4 1033 358 279 7 14 chr17 58796243 58796385 -36476266 + L1_Rod LINE L1 5690 5830 -17 4 1033 636 317 76 138 chr17 58796830 58797134 -36475517 + B4 SINE B4 8 292 0 4 1033 2903 43 3 0 chr17 58797191 58797536 -36475115 + ORR1A1 LTR MaLR 1 346 0 4 1033 254 317 0 28 chr17 58798020 58798127 -36474524 + RLTR45-int LTR ERVK 3277 3380 -3864 4 1033 9660 259 36 25 chr17 58798236 58801886 -36470765 + ETnERV2-int LTR ERVK 1728 6204 -1202 4 1033 559 222 92 126 chr17 58802386 58802767 -36469884 + RLTR9A LTR ERVK 1 368 0 4 1033 24 32 0 0 chr17 58802849 58802880 -36469771 + AT_rich Low_complexity Low_complexity 1 31 0 4 1033 199 271 21 0 chr17 58802958 58803006 -36469645 + MIR SINE MIR 206 254 -8 4 1033 226 294 43 0 chr17 58803086 58803178 -36469473 - MamRep434 DNA TcMar -212 214 119 4 1033 432 0 0 0 chr17 58803489 58803537 -36469114 + (TC)n Simple_repeat Simple_repeat 1 48 0 4 1033 362 325 80 34 chr17 58803580 58803755 -36468896 - ID_B1 SINE B4 -13 211 29 4 1033 326 266 0 6 chr17 58804034 58804212 -36468439 + (TG)n Simple_repeat Simple_repeat 2 178 0 4 1033 694 195 0 16 chr17 58804281 58804406 -36468245 + ORR1A4 LTR MaLR 1 123 -206 4 1033 408 299 0 10 chr17 58804454 58804552 -36468099 + B4A SINE B4 17 113 -179 4 1033 996 214 0 43 chr17 58804555 58804765 -36467886 + ORR1A4 LTR MaLR 129 329 0 4 1033 554 345 47 35 chr17 58804782 58805037 -36467614 - B4A SINE B4 -18 274 17 4 1033 2365 107 0 0 chr17 58805067 58805394 -36467257 + ORR1A2 LTR MaLR 1 327 0 4 1033 850 322 34 20 chr17 58805734 58806021 -36466630 + ORR1E LTR MaLR 1 282 -92 4 1033 260 322 25 42 chr17 58806079 58806199 -36466452 + RMER4A LTR ERVK 8 125 -341 4 1033 8708 186 7 32 chr17 58806350 58808393 -36464258 + MuRRS-int LTR ERV1 2152 4518 -3260 4 1033 1650 114 30 11 chr17 58808393 58808660 -36463991 + RLTR13D4 LTR ERVK 762 1033 0 4 1033 561 318 69 72 chr17 58808696 58809028 -36463623 - RLTR18 LTR ERVK -285 331 1 4 1033 1015 254 7 71 chr17 58809063 58809359 -36463292 - B4 SINE B4 -14 278 2 4 1033 499 301 132 28 chr17 58809587 58809798 -36462853 - MLT2C2 LTR ERVL -96 368 136 4 1033 1656 145 85 33 chr17 58809798 58810104 -36462547 + ORR1A4 LTR MaLR 1 322 -7 4 1033 246 256 133 0 chr17 58810109 58810199 -36462452 - MLT2C2 LTR ERVL -273 141 40 4 1033 261 197 0 0 chr17 58810640 58810701 -36461950 + CT-rich Low_complexity Low_complexity 3 63 0 4 1033 198 0 0 0 chr17 58810716 58810738 -36461913 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 1033 574 377 17 50 chr17 58810774 58811073 -36461578 - B4A SINE B4 0 292 4 4 1033 309 167 45 15 chr17 58811111 58811178 -36461473 - RMER30 DNA MER1_type -29 173 105 4 1033 293 312 65 0 chr17 58811358 58811451 -36461200 - Tigger5 DNA MER2_type 0 2406 2308 4 1033 865 224 126 58 chr17 58811778 58812039 -36460612 - RLTR25B LTR ERVK 0 1028 750 4 1033 1325 201 29 45 chr17 58812626 58812806 -36459845 - RLTR25B LTR ERVK -526 502 322 4 1033 441 81 0 0 chr17 58812806 58812868 -36459783 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 1033 1325 201 29 45 chr17 58812868 58812995 -36459656 - RLTR25B LTR ERVK -707 321 200 4 1033 405 0 0 0 chr17 58813000 58813045 -36459606 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1033 1037 201 60 0 chr17 58813225 58813424 -36459227 - RLTR25B LTR ERVK -886 217 7 4 1033 1095 30 0 0 chr17 58813517 58813648 -36459003 + (TTTC)n Simple_repeat Simple_repeat 1 131 0 4 1033 416 296 46 9 chr17 58813649 58813758 -36458893 - RSINE1 SINE B4 -6 159 47 4 1033 259 308 38 9 chr17 58814494 58814599 -36458052 + PB1D10 SINE Alu 4 111 -6 4 1033 443 338 0 15 chr17 58814858 58814993 -36457658 - B4A SINE B4 -132 160 28 4 1033 207 0 0 0 chr17 58815015 58815038 -36457613 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1033 564 322 9 43 chr17 58815050 58815239 -36457412 - B3A SINE B2 -23 170 1 4 1033 636 14 0 0 chr17 58815297 58815370 -36457281 + (GAAA)n Simple_repeat Simple_repeat 4 76 0 4 1033 435 235 59 0 chr17 58815710 58815812 -36456839 + ORR1A1 LTR MaLR 165 272 -74 4 1033 1311 133 0 0 chr17 58815848 58816051 -36456600 + ORR1A3-int LTR MaLR 1194 1396 -567 4 1033 1378 252 58 48 chr17 58816110 58816489 -36456162 - RMER10B LTR ERVL -15 383 1 4 1033 425 323 103 59 chr17 58816508 58816847 -36455804 - MTD LTR MaLR -60 359 6 5 1033 717 331 79 4 chr17 58817594 58817846 -36454805 + B4A SINE B4 14 284 -8 5 1033 383 297 59 0 chr17 58818235 58818335 -36454316 + ID_B1 SINE B4 1 106 -118 5 1033 1381 247 2 94 chr17 58818335 58818729 -36453922 - RMER19C LTR ERVK 0 611 254 5 1033 7347 106 6 3 chr17 58818729 58819749 -36452902 - RLTR13D2 LTR ERVK 0 1023 1 5 1033 5932 156 74 28 chr17 58819761 58821483 -36451168 - RMER16-int LTR ERVK -1099 4307 2874 5 1033 369 0 0 0 chr17 58821483 58821524 -36451127 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 1033 5932 168 38 51 chr17 58821524 58822149 -36450502 - RMER16-int LTR ERVK -2533 2873 2305 5 1033 634 362 18 14 chr17 58822758 58822979 -36449672 + B4 SINE B4 16 237 -55 5 1033 531 31 0 0 chr17 58823004 58823069 -36449582 + (CA)n Simple_repeat Simple_repeat 1 65 0 5 1033 430 190 0 12 chr17 58823070 58823155 -36449496 + RLTR20D LTR ERVK 1 84 -484 5 1033 385 274 78 10 chr17 58823156 58823259 -36449392 - B4A SINE B4 -182 110 1 5 1033 2023 162 0 0 chr17 58823259 58823617 -36449034 - L1_Mm LINE L1 -882 5001 4644 5 1033 548 306 48 43 chr17 58823944 58824132 -36448519 + B4A SINE B4 1 189 -103 5 1033 281 293 43 21 chr17 58824235 58824340 -36448311 + MTE2b LTR MaLR 273 419 0 5 1033 291 54 0 0 chr17 58824997 58825034 -36447617 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1033 661 79 20 0 chr17 58825034 58825135 -36447516 + (GA)n Simple_repeat Simple_repeat 1 103 0 5 1033 448 258 171 69 chr17 58825912 58826048 -36446603 + B3A SINE B2 3 162 -36 5 1033 330 26 0 0 chr17 58826048 58826087 -36446564 + (TCTCCC)n Simple_repeat Simple_repeat 5 43 0 5 1033 448 258 171 69 chr17 58826087 58826125 -36446526 + B3A SINE B2 163 195 -3 5 1033 231 36 0 0 chr17 58826242 58826270 -36446381 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1033 456 19 0 0 chr17 58826271 58826324 -36446327 + (GGGAGA)n Simple_repeat Simple_repeat 3 55 0 5 1033 410 270 238 0 chr17 58826335 58826461 -36446190 - B3A SINE B2 -41 157 2 5 1033 227 31 31 0 chr17 58826461 58826493 -36446158 + (TC)n Simple_repeat Simple_repeat 2 34 0 5 1033 231 36 0 0 chr17 58826493 58826521 -36446130 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1033 801 295 98 30 chr17 58826687 58826953 -36445698 - B4A SINE B4 -1 291 8 5 1033 27 0 0 0 chr17 58827525 58827552 -36445099 + AT_rich Low_complexity Low_complexity 1 27 0 5 1033 1039 305 40 0 chr17 58828030 58828302 -36444349 - B4 SINE B4 -9 283 1 5 1033 404 331 38 45 chr17 58828959 58829092 -36443559 + B4 SINE B4 14 145 -147 5 1033 1272 251 72 17 chr17 58830611 58830956 -36441695 + MTEb LTR MaLR 7 370 -9 5 1033 215 197 45 0 chr17 58831712 58831778 -36440873 + CT-rich Low_complexity Low_complexity 5 73 0 5 1033 369 0 0 0 chr17 58831823 58831864 -36440787 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1033 1053 282 118 6 chr17 58831971 58832310 -36440341 + MTEa LTR MaLR 1 377 -2 5 1033 21 0 0 0 chr17 58832395 58832416 -36440235 + AT_rich Low_complexity Low_complexity 1 21 0 5 1033 31873 75 3 7 chr17 58832851 58838043 -36434608 + L1Md_F3 LINE L1 416 5585 -298 5 1033 7523 74 6 4 chr17 58838044 58839040 -36433611 + L1Md_F3 LINE L1 5587 6584 0 5 1033 31 26 0 0 chr17 58839045 58839083 -36433568 + AT_rich Low_complexity Low_complexity 1 38 0 5 1033 226 338 0 15 chr17 58840163 58840229 -36432422 + MTEb LTR MaLR 18 82 -297 5 1033 2375 86 12 9 chr17 58840522 58840864 -36431787 + RMER17A LTR ERVK 1 343 -408 5 1033 1032 51 12 19 chr17 58840864 58841025 -36431626 + (TC)n Simple_repeat Simple_repeat 2 161 0 5 1033 1215 218 128 14 chr17 58841025 58841297 -36431354 + RMER17A LTR ERVK 495 793 -16 5 1033 265 246 0 58 chr17 58841371 58841440 -36431211 + Lx8 LINE L1 6621 6685 -788 5 1033 938 238 19 28 chr17 58841774 58841986 -36430665 + MT2A LTR ERVL 4 213 -320 5 1033 225 200 16 16 chr17 58842014 58842075 -36430576 + MT2A LTR ERVL 178 238 -295 5 1033 1383 263 78 3 chr17 58842122 58842469 -36430182 + ORR1D1 LTR MaLR 1 373 -1 5 1033 557 14 0 40 chr17 58844128 58844203 -36428448 + (TTCTC)n Simple_repeat Simple_repeat 5 76 0 5 1033 483 373 68 32 chr17 58844895 58845147 -36427504 - B4 SINE B4 -22 270 10 5 1033 342 0 0 0 chr17 58845188 58845226 -36427425 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 1033 21 36 0 0 chr17 58845306 58845334 -36427317 + AT_rich Low_complexity Low_complexity 1 28 0 5 1033 239 308 13 0 chr17 58845682 58845760 -36426891 + (TATG)n Simple_repeat Simple_repeat 1 79 0 5 1033 300 292 86 62 chr17 58845818 58845946 -36426705 - B4A SINE B4 -112 180 50 5 1033 1478 77 0 0 chr17 58846566 58846762 -36425889 + L1_Mus3 LINE L1 6120 6315 -323 5 1033 273 237 87 127 chr17 58846762 58846912 -36425739 - B4A SINE B4 -41 251 108 5 1033 802 263 105 62 chr17 58846969 58847245 -36425406 + RMER21B LTR ERV1 277 564 -278 5 1033 1459 239 28 8 chr17 58847465 58847824 -36424827 - ORR1D2 LTR MaLR 0 370 5 5 1033 552 304 58 49 chr17 58847943 58848168 -36424483 - RMER15 LTR ERVL -13 562 336 5 1033 416 372 0 40 chr17 58849128 58849279 -36423372 + B4A SINE B4 1 145 -147 5 1033 1936 207 40 33 chr17 58849356 58849690 -36422961 + Lx5 LINE L1 6590 6917 -133 5 1033 342 0 0 0 chr17 58849690 58849728 -36422923 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1033 1936 207 40 33 chr17 58849728 58849848 -36422803 + Lx5 LINE L1 6918 7047 -3 5 1033 490 323 102 10 chr17 58850929 58851126 -36421525 - B3 SINE B2 0 216 2 5 1034 1687 56 5 0 chr17 58851542 58851757 -36420894 - L1Md_T LINE L1 0 6582 6367 5 1034 410 279 9 28 chr17 58851767 58851874 -36420777 - B4 SINE B4 -65 227 123 5 1034 518 254 82 0 chr17 58852049 58852159 -36420492 - B4 SINE B4 -173 119 1 5 1034 479 340 62 62 chr17 58852609 58852866 -36419785 + B4 SINE B4 36 292 0 5 1034 211 224 15 15 chr17 58852866 58852934 -36419717 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 1034 373 216 7 7 chr17 58852945 58853085 -36419566 + (CA)n Simple_repeat Simple_repeat 2 141 0 5 1034 261 57 0 0 chr17 58853084 58853119 -36419532 + (TC)n Simple_repeat Simple_repeat 1 35 0 5 1034 1518 171 91 0 chr17 58853201 58853503 -36419148 + IAPEY3_LTR LTR ERVK 1 345 0 5 1034 543 16 0 0 chr17 58854066 58854130 -36418521 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 1034 836 338 78 11 chr17 58854245 58854514 -36418137 - B4 SINE B4 0 292 6 5 1034 411 73 0 0 chr17 58854568 58854623 -36418028 + (TATG)n Simple_repeat Simple_repeat 1 55 0 5 1034 332 315 145 8 chr17 58854630 58854761 -36417890 - B3 SINE B2 -67 149 1 5 1034 751 259 128 13 chr17 58855096 58855323 -36417328 + MER2 DNA MER2_type 86 338 -7 5 1034 534 302 0 22 chr17 58856043 58856273 -36416378 - L1M1 LINE L1 -676 5627 5403 5 1034 1114 289 32 32 chr17 58856273 58856652 -36415999 + MTE2a LTR MaLR 1 379 0 5 1034 199 98 0 56 chr17 58856701 58856755 -36415896 + T-rich Low_complexity Low_complexity 2 52 0 5 1034 35497 23 1 7 chr17 58856828 58862014 -36410637 + L1Md_T LINE L1 440 5586 -297 5 1034 8322 35 7 0 chr17 58862014 58863000 -36409651 + L1Md_T LINE L1 5587 6579 -3 5 1034 377 340 55 36 chr17 58863531 58863696 -36408955 + Charlie1a DNA MER1_type 36 203 -1252 5 1034 278 345 82 22 chr17 58863792 58863976 -36408675 + B4A SINE B4 12 206 -86 5 1034 474 91 0 0 chr17 58864057 58864134 -36408517 + (TC)n Simple_repeat Simple_repeat 1 77 0 5 1034 495 275 64 32 chr17 58864154 58864268 -36408383 + Charlie1a DNA MER1_type 766 887 -568 5 1034 207 0 0 0 chr17 58864268 58864291 -36408360 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 1034 495 275 64 32 chr17 58864291 58864394 -36408257 + Charlie1a DNA MER1_type 888 990 -465 5 1034 316 251 37 157 chr17 58864601 58864739 -36407912 - MLT1A LTR MaLR -248 126 1 5 1034 198 0 0 0 chr17 58864810 58864832 -36407819 + (CAA)n Simple_repeat Simple_repeat 3 24 0 5 1034 702 280 23 11 chr17 58865628 58865805 -36406846 + B4 SINE B4 55 233 -59 5 1034 1368 263 38 17 chr17 58865832 58866254 -36406397 + Lx8 LINE L1 6102 6532 -941 5 1034 322 310 52 65 chr17 58866266 58866497 -36406154 - RLTR14 LTR ERV1 0 382 155 5 1034 1430 311 84 21 chr17 58866685 58867349 -36405302 + Lx8 LINE L1 6561 7266 -207 5 1034 372 22 0 0 chr17 58867603 58867648 -36405003 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1034 378 230 100 0 chr17 58868066 58868166 -36404485 - RMER5 LTR ERV1 0 534 425 5 1034 6838 33 5 21 chr17 58868222 58869931 -36402720 + L1Md_A LINE L1 415 2090 -3793 5 1034 34791 37 0 3 chr17 58869928 58875263 -36397388 + L1Md_A LINE L1 173 5589 -297 5 1034 8255 38 2 0 chr17 58875263 58876257 -36396394 + L1Md_A LINE L1 5590 6585 0 5 1034 369 0 0 0 chr17 58876294 58876335 -36396316 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1034 858 126 0 0 chr17 58876794 58876929 -36395722 + (TC)n Simple_repeat Simple_repeat 2 136 0 5 1034 624 322 39 28 chr17 58876956 58877138 -36395513 - B4 SINE B4 -2 290 107 5 1034 6020 100 80 4 chr17 58877195 58878477 -36394174 + L1_Mus3 LINE L1 5248 6632 -6 5 1034 301 284 14 0 chr17 58878490 58878564 -36394087 + B2_Mm2 SINE B2 27 101 -94 5 1034 619 332 65 7 chr17 58878645 58878936 -36393715 - Lx8 LINE L1 -34 7439 7132 5 1034 353 114 57 0 chr17 58878934 58879004 -36393647 + L1_Mur3 LINE L1 3702 3775 -2105 5 1034 365 198 19 0 chr17 58879015 58879121 -36393530 + Lx5 LINE L1 6943 7050 0 5 1034 1421 158 41 41 chr17 58879489 58879819 -36392832 + ORR1A2 LTR MaLR 1 326 -68 5 1034 21 0 0 0 chr17 58879831 58879852 -36392799 + AT_rich Low_complexity Low_complexity 1 21 0 5 1034 321 358 40 0 chr17 58879969 58880117 -36392534 + RMER15 LTR ERVL 422 575 0 5 1034 3552 176 89 50 chr17 58880326 58881297 -36391354 + MYSERV6-int LTR ERVK 4010 5017 -3942 5 1034 554 183 8 55 chr17 58881379 58881506 -36391145 + MYSERV6-int LTR ERVK 5010 5130 -3829 5 1034 16309 102 34 4 chr17 58881506 58884185 -36388466 + Lx2 LINE L1 549 3305 -609 5 1034 261 0 0 0 chr17 58884185 58884214 -36388437 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1034 16309 146 104 4 chr17 58884214 58886758 -36385893 + Lx2 LINE L1 3306 6644 -353 5 1034 1046 169 70 0 chr17 58886751 58886964 -36385687 + Lx2 LINE L1 6770 6997 0 5 1034 375 282 93 7 chr17 58887129 58887279 -36385372 - RSINE1 SINE B4 -2 163 1 5 1034 244 120 20 20 chr17 58887304 58887355 -36385296 + CT-rich Low_complexity Low_complexity 5 55 0 5 1034 202 118 29 0 chr17 58887355 58887389 -36385262 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 5 1034 656 314 29 0 chr17 58887607 58887779 -36384872 - B4 SINE B4 -5 287 111 5 1034 728 161 31 0 chr17 58888081 58888242 -36384409 - L1_Mus3 LINE L1 -3 6635 6470 6 1034 198 71 0 0 chr17 58888321 58888349 -36384302 + (A)n Simple_repeat Simple_repeat 1 28 0 6 1034 1002 281 49 26 chr17 58889182 58889449 -36383202 + B4 SINE B4 18 290 -2 6 1034 396 82 0 0 chr17 58889473 58889534 -36383117 + (CA)n Simple_repeat Simple_repeat 1 61 0 6 1034 610 327 109 0 chr17 58889534 58889800 -36382851 + MLT1A0 LTR MaLR 34 328 -37 6 1034 1807 254 59 55 chr17 58890376 58891000 -36381651 + Lx9 LINE L1 6632 7258 -386 6 1034 1029 268 95 22 chr17 58891003 58891320 -36381331 + ORR1E LTR MaLR 3 342 -17 6 1034 243 0 0 0 chr17 58891470 58891497 -36381154 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1034 201 89 17 67 chr17 58891501 58891561 -36381090 + A-rich Low_complexity Low_complexity 3 59 0 6 1034 1826 182 39 39 chr17 58892889 58893358 -36379293 - RLTR25B LTR ERVK -2 1101 487 6 1034 23 33 0 0 chr17 58893494 58893524 -36379127 + AT_rich Low_complexity Low_complexity 1 30 0 6 1034 21 57 0 0 chr17 58893591 58893626 -36379025 + AT_rich Low_complexity Low_complexity 1 35 0 6 1034 198 0 0 0 chr17 58894547 58894569 -36378082 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 6 1034 337 333 32 45 chr17 58894903 58895060 -36377591 - RMER15 LTR ERVL -416 159 5 6 1034 249 386 49 25 chr17 58895729 58895851 -36376800 - LTR50 LTR ERVL -283 512 388 6 1034 465 255 77 14 chr17 58895965 58896108 -36376543 + RSINE1 SINE B4 1 152 -13 6 1034 2431 270 120 27 chr17 58896142 58896915 -36375736 - RMER13A LTR ERVK -15 845 1 6 1034 573 113 31 0 chr17 58897440 58897537 -36375114 - L1Md_F2 LINE L1 -12 6570 6471 6 1034 41046 21 0 6 chr17 58897537 58903715 -36368936 - L1Md_T LINE L1 -3 6579 443 6 1034 3775 50 0 0 chr17 58903714 58904157 -36368494 - L1Md_F2 LINE L1 -95 6487 6045 6 1034 234 62 0 0 chr17 58904379 58904411 -36368240 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 1034 255 268 11 58 chr17 58904483 58904570 -36368081 - B4 SINE B4 -207 85 3 6 1034 21 36 0 0 chr17 58905103 58905131 -36367520 + AT_rich Low_complexity Low_complexity 1 28 0 6 1034 496 351 0 56 chr17 58905339 58905481 -36367170 + RSINE1 SINE B4 15 148 -17 6 1034 866 220 100 0 chr17 58906375 58906575 -36366076 - URR1A DNA MER1_type -6 220 1 6 1034 421 268 39 107 chr17 58906575 58906599 -36366052 + CYRA11_Mm Unknown Y-chromosome 227 387 -230 6 1034 1793 279 83 30 chr17 58906599 58907275 -36365376 + Lx8 LINE L1 6757 7468 -5 6 1034 183 303 159 36 chr17 58907472 58907667 -36364984 + MIRb SINE MIR 5 223 -45 6 1034 390 21 0 0 chr17 58908552 58908599 -36364052 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1034 250 295 0 71 chr17 58908679 58908763 -36363888 + B4A SINE B4 215 292 0 6 1034 785 291 35 10 chr17 58908931 58909132 -36363519 - B3 SINE B2 -10 206 1 6 1034 318 115 0 37 chr17 58909233 58909287 -36363364 - HAL1-3A_ME LINE L1 -832 2026 1975 6 1034 185 119 24 0 chr17 58909510 58909552 -36363099 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 6 1034 230 350 37 12 chr17 58909748 58909829 -36362822 - MER117 DNA MER1_type -24 173 91 6 1034 185 231 0 0 chr17 58911366 58911405 -36361246 + L2 LINE L2 1972 2010 -1409 6 1034 183 114 0 0 chr17 58911518 58911553 -36361098 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 6 1034 651 333 20 53 chr17 58911598 58911845 -36360806 - B4 SINE B4 -12 280 42 6 1034 1150 131 5 39 chr17 58911845 58912133 -36360518 + L1Md_F2 LINE L1 6382 6582 0 6 1034 186 43 0 0 chr17 58912146 58912169 -36360482 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 6 1034 22 35 0 0 chr17 58913086 58913115 -36359536 + AT_rich Low_complexity Low_complexity 1 29 0 6 1034 357 304 34 59 chr17 58913564 58913683 -36358968 + PB1D10 SINE Alu 1 116 -1 6 1034 228 351 13 0 chr17 58914020 58914097 -36358554 - L2b LINE L2 -287 3088 3011 6 1034 546 202 96 0 chr17 58914818 58914922 -36357729 - RLTR28B LTR ERVL -367 114 1 6 1034 2144 132 125 16 chr17 58914973 58915342 -36357309 + RLTR9E LTR ERVK 1 409 0 6 1034 414 39 0 0 chr17 58915508 58915560 -36357091 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1034 966 202 33 33 chr17 58915560 58915805 -36356846 + RMER10B LTR ERVL 21 265 -133 6 1034 241 89 22 22 chr17 58915808 58915854 -36356797 + (TCC)n Simple_repeat Simple_repeat 2 47 0 6 1034 244 362 8 52 chr17 58915862 58915996 -36356655 + RMER10B LTR ERVL 194 321 -77 6 1034 1178 131 26 20 chr17 58915972 58916167 -36356484 - ORR1A2 LTR MaLR -131 196 1 6 1034 1306 156 242 16 chr17 58916274 58916534 -36356117 + MTB LTR MaLR 1 320 -80 6 1034 3353 59 15 0 chr17 58916534 58916926 -36355725 - MTB LTR MaLR 0 400 3 6 1034 669 73 0 77 chr17 58916926 58917013 -36355638 + MTB LTR MaLR 321 400 0 6 1034 7377 113 11 58 chr17 58917013 58918165 -36354486 + MTB-int LTR MaLR 1 1098 0 6 1034 2522 115 32 66 chr17 58918169 58918579 -36354072 + MTB LTR MaLR 5 400 0 6 1034 315 282 0 0 chr17 58919215 58919300 -36353351 + (CA)n Simple_repeat Simple_repeat 2 86 0 6 1034 356 285 89 49 chr17 58920296 58920499 -36352152 - RMER10A LTR ERVL -13 429 219 6 1034 1228 62 14 0 chr17 58920505 58920651 -36352000 + B1_Mus1 SINE Alu 1 148 0 6 1034 264 75 60 36 chr17 58920652 58920735 -36351916 + A-rich Low_complexity Low_complexity 1 85 0 6 1034 1202 259 71 33 chr17 58920805 58921200 -36351451 + RLTR17 LTR ERVK 208 617 -75 6 1034 74 23 0 0 chr17 58921443 58921531 -36351120 + AT_rich Low_complexity Low_complexity 1 88 0 6 1034 1238 75 0 0 chr17 58921612 58921759 -36350892 - B1_Mm SINE Alu 0 147 1 6 1034 216 0 0 0 chr17 58922086 58922110 -36350541 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1034 2562 63 33 0 chr17 58924340 58924641 -36348010 + RLTR10E LTR ERVK 1 311 0 6 1034 1132 315 87 37 chr17 58924765 58925273 -36347378 + MT2A LTR ERVL 1 533 0 6 1034 17968 86 21 2 chr17 58926359 58928922 -36343729 - L1_Mur1 LINE L1 -2069 3817 1206 6 1034 2113 110 41 6 chr17 58928910 58929361 -36343290 - L1_Mur1 LINE L1 -4374 1512 1021 6 1034 315 0 0 0 chr17 58929361 58929396 -36343255 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1034 2113 124 132 20 chr17 58929396 58929515 -36343136 - L1_Mur1 LINE L1 -5964 1020 899 6 1034 4544 142 36 8 chr17 58929505 58930838 -36341813 - L1VL4 LINE L1 -1878 1681 310 6 1034 665 172 8 0 chr17 58930993 58931121 -36341530 + URR1B DNA MER1_type 96 224 -1 6 1034 2234 51 0 4 chr17 58931171 58931448 -36341203 - L1Md_F2 LINE L1 -541 6043 5768 6 1034 4370 58 8 0 chr17 58931448 58931962 -36340689 + L1Md_F2 LINE L1 6065 6582 0 6 1034 724 323 79 65 chr17 58932817 58933114 -36339537 - ORR1E LTR MaLR 0 359 56 6 1034 3812 13 0 0 chr17 58933114 58933510 -36339141 + MTA_Mm LTR MaLR 1 396 0 6 1034 724 323 79 65 chr17 58933510 58933566 -36339085 - ORR1E LTR MaLR -304 55 1 6 1034 663 167 26 0 chr17 58933649 58933805 -36338846 + GA-rich Low_complexity Low_complexity 3 162 0 6 1034 299 243 11 195 chr17 58934537 58934711 -36337940 + MLT1A0 LTR MaLR 9 150 -215 6 1034 286 300 162 24 chr17 58934896 58935084 -36337567 - MER90a LTR ERV1 -358 256 5 6 1034 1713 224 47 26 chr17 58935133 58935518 -36337133 + ORR1B1 LTR MaLR 1 393 -1 6 1034 379 288 45 9 chr17 58935749 58935861 -36336790 + MT2A LTR ERVL 228 343 -190 6 1034 1496 81 118 9 chr17 58935865 58936077 -36336574 + L1Md_F2 LINE L1 6348 6582 0 6 1034 798 204 93 89 chr17 58936240 58936509 -36336142 + RMER12 LTR ERVK 949 1218 -104 6 1034 284 324 116 9 chr17 58936616 58936728 -36335923 + MIRb SINE MIR 22 145 -123 6 1034 252 0 0 0 chr17 58937058 58937086 -36335565 + (A)n Simple_repeat Simple_repeat 1 28 0 6 1034 513 318 30 50 chr17 58937086 58937285 -36335366 - ORR1E LTR MaLR -145 214 20 6 1034 1017 292 13 43 chr17 58937808 58938109 -36334542 + B4A SINE B4 1 292 0 6 1034 383 0 21 0 chr17 58938118 58938165 -36334486 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 1034 333 47 0 0 chr17 58938165 58938207 -36334444 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 1034 207 311 71 54 chr17 58938672 58938784 -36333867 - MIRb SINE MIR -75 193 80 6 1034 588 226 20 14 chr17 58938961 58939109 -36333542 - MTEb LTR MaLR -2 377 229 6 1034 6673 45 8 0 chr17 58939121 58939883 -36332768 - L1Md_F2 LINE L1 -2 6580 5813 6 1034 296 294 110 24 chr17 58939891 58940055 -36332596 - RMER12 LTR ERVK -396 1008 831 6 1034 1813 213 130 40 chr17 58940048 58940624 -36332027 - RMER12 LTR ERVK -1265 583 1 6 1034 1117 330 17 11 chr17 58941059 58941421 -36331230 + MTEa LTR MaLR 6 369 -10 6 1034 537 16 0 0 chr17 58941699 58941761 -36330890 + (TG)n Simple_repeat Simple_repeat 2 63 0 6 1034 533 266 7 41 chr17 58941765 58941910 -36330741 - B4A SINE B4 -19 273 134 6 1034 552 15 0 0 chr17 58942343 58942408 -36330243 + (TG)n Simple_repeat Simple_repeat 1 65 0 6 1034 4895 170 63 23 chr17 58943564 58944794 -36327857 - Lx3C LINE L1 -870 6106 4862 6 1034 7245 186 15 4 chr17 58944782 58946235 -36326416 - Lx3C LINE L1 -2612 3274 1806 6 1034 563 268 111 48 chr17 58946337 58946545 -36326106 + RLTR16 LTR ERVK 23 243 -262 6 1034 265 342 81 19 chr17 58947286 58947447 -36325204 - LTR33B LTR ERVL -331 172 2 6 1034 28 0 0 0 chr17 58947836 58947864 -36324787 + AT_rich Low_complexity Low_complexity 1 28 0 6 1034 398 298 52 19 chr17 58948149 58948303 -36324348 - ERVL-E-int LTR ERVL -816 4851 4693 6 1034 1287 233 70 45 chr17 58948486 58948926 -36323725 + RMER6B LTR ERVK 1 451 -10 6 1034 1196 94 0 11 chr17 58948927 58949109 -36323542 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 1034 972 307 21 12 chr17 58949193 58949434 -36323217 - B4 SINE B4 -2 290 48 6 1034 325 307 35 0 chr17 58949762 58949876 -36322775 - ERVL-E-int LTR ERVL -1535 4222 4105 6 1034 252 59 0 0 chr17 58949891 58949925 -36322726 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 6 1034 881 264 128 114 chr17 58950732 58950796 -36321855 - MTEa LTR MaLR -2 377 314 6 1034 1195 95 0 0 chr17 58950796 58950944 -36321707 + B1_Mus1 SINE Alu 1 148 0 6 1034 881 264 128 114 chr17 58950944 58951247 -36321404 - MTEa LTR MaLR -66 313 5 6 1034 1179 97 0 0 chr17 58951393 58951538 -36321113 + B1_Mus1 SINE Alu 1 145 -3 7 1034 1983 65 0 33 chr17 58951592 58951862 -36320789 - L1_Mus4 LINE L1 -360 6276 6016 7 1034 2265 109 0 9 chr17 58951862 58952386 -36320265 + L1_Mus4 LINE L1 6325 6636 0 7 1034 476 203 246 0 chr17 58953061 58953199 -36319452 + URR1B DNA MER1_type 2 173 -52 7 1034 264 281 82 35 chr17 58953204 58953400 -36319251 - RMER4B LTR ERVK 0 585 346 7 1034 223 263 10 40 chr17 58953447 58953546 -36319105 + (CAG)n Simple_repeat Simple_repeat 1 96 0 7 1034 723 237 72 26 chr17 58953547 58953742 -36318909 - RMER4B LTR ERVK -292 293 90 7 1034 556 319 41 23 chr17 58953779 58953997 -36318654 - Lx8 LINE L1 -254 7219 6998 7 1034 229 262 15 90 chr17 58954150 58954217 -36318434 + MIRm SINE MIR 95 156 -120 7 1034 453 168 0 0 chr17 58956330 58956437 -36316214 + (CA)n Simple_repeat Simple_repeat 2 108 0 7 1034 3236 47 0 5 chr17 58956681 58957062 -36315589 - L1Md_F2 LINE L1 -12 6570 6192 7 1034 322 381 102 41 chr17 58957275 58957521 -36315130 + B4 SINE B4 22 282 -10 7 1034 228 100 0 0 chr17 58957522 58957562 -36315089 + (TC)n Simple_repeat Simple_repeat 1 40 0 7 1034 614 344 39 39 chr17 58959529 58959783 -36312868 - B4 SINE B4 -12 280 27 7 1034 499 324 62 21 chr17 58960057 58960249 -36312402 + B4 SINE B4 20 219 -73 7 1034 963 231 0 5 chr17 58960271 58960458 -36312193 + B3 SINE B2 21 206 -10 7 1034 450 290 157 14 chr17 58960633 58960780 -36311871 + B4 SINE B4 109 276 -16 7 1034 453 19 0 0 chr17 58960829 58960883 -36311768 + (CA)n Simple_repeat Simple_repeat 2 55 0 7 1034 272 164 15 0 chr17 58960892 58960959 -36311692 + GA-rich Low_complexity Low_complexity 1 68 0 7 1034 369 0 0 0 chr17 58961189 58961230 -36311421 + (TC)n Simple_repeat Simple_repeat 2 42 0 7 1034 586 172 0 53 chr17 58961233 58961423 -36311228 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1034 387 0 0 0 chr17 58961424 58961467 -36311184 + (GA)n Simple_repeat Simple_repeat 1 43 0 7 1034 586 316 45 41 chr17 58962599 58962843 -36309808 - RLTR18B LTR ERVK 0 512 268 7 1034 943 118 137 0 chr17 58962833 58962994 -36309657 - B2_Mm2 SINE B2 -7 188 6 7 1034 534 343 25 74 chr17 58963137 58963461 -36309190 - RLTR18 LTR ERVK -296 320 13 7 1034 605 294 15 3 chr17 58963508 58963688 -36308963 + B4 SINE B4 104 288 -4 7 1034 498 17 0 0 chr17 58963691 58963750 -36308901 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 1034 609 52 0 0 chr17 58963750 58963826 -36308825 + (GA)n Simple_repeat Simple_repeat 2 78 0 7 1034 2612 253 45 53 chr17 58963992 58964789 -36307862 - Lx8 LINE L1 -10 7463 6673 7 1034 342 0 0 0 chr17 58966741 58966779 -36305872 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1034 480 288 175 9 chr17 58967356 58967573 -36305078 - RMER15 LTR ERVL -48 527 275 7 1034 282 116 0 0 chr17 58967573 58967616 -36305035 + (TCC)n Simple_repeat Simple_repeat 3 45 0 7 1034 196 324 28 0 chr17 58968362 58968433 -36304218 + L3 LINE CR1 3562 3634 -855 7 1034 10708 42 1 1 chr17 58968967 58970241 -36302410 + L1Md_F3 LINE L1 4312 5585 -298 7 1034 8732 40 1 2 chr17 58970242 58971255 -36301396 + L1Md_F3 LINE L1 5587 6584 0 7 1034 201 218 0 0 chr17 58971267 58971345 -36301306 + A-rich Low_complexity Low_complexity 1 78 0 7 1034 834 11 0 0 chr17 58971415 58971510 -36301141 + (GAA)n Simple_repeat Simple_repeat 2 96 0 7 1034 1286 78 0 6 chr17 58971519 58971700 -36300951 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 7 1034 1025 303 65 21 chr17 58971821 58972158 -36300493 + ORR1E LTR MaLR 8 359 0 7 1034 309 359 0 0 chr17 58972768 58972874 -36299777 + Tigger5 DNA MER2_type 1 106 -2300 7 1034 521 267 147 31 chr17 58972884 58973143 -36299508 + MT2A LTR ERVL 245 533 0 7 1034 298 333 25 0 chr17 58973394 58973475 -36299176 + B4 SINE B4 4 86 -206 7 1034 358 172 15 15 chr17 58973486 58973551 -36299100 - 4.5SRNA scRNA scRNA -14 80 16 7 1034 396 0 0 0 chr17 58973632 58973676 -36298975 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 7 1034 507 317 80 6 chr17 58973708 58973870 -36298781 + B4 SINE B4 89 262 -30 7 1034 344 242 46 83 chr17 58974289 58974397 -36298254 + PB1D10 SINE Alu 1 104 -13 7 1034 281 47 0 23 chr17 58974397 58974441 -36298210 + (CAAAA)n Simple_repeat Simple_repeat 1 43 0 7 1034 230 20 78 39 chr17 58975098 58975149 -36297502 + (CAAA)n Simple_repeat Simple_repeat 1 53 0 7 1034 438 75 0 0 chr17 58975666 58975733 -36296918 + (T)n Simple_repeat Simple_repeat 1 67 0 7 1034 470 285 173 84 chr17 58976008 58976257 -36296394 + B4 SINE B4 3 273 -19 7 1034 24 0 0 0 chr17 58976376 58976400 -36296251 + AT_rich Low_complexity Low_complexity 1 24 0 7 1034 600 309 148 7 chr17 58976472 58976749 -36295902 + MLT-int LTR MaLR 34 349 -1386 7 1034 365 277 140 18 chr17 58976887 58977001 -36295650 + B3 SINE B2 4 131 -85 7 1034 405 0 0 0 chr17 58977031 58977076 -36295575 + (TC)n Simple_repeat Simple_repeat 1 45 0 7 1034 405 102 0 0 chr17 58977077 58977136 -36295515 + (TA)n Simple_repeat Simple_repeat 1 59 0 7 1034 537 30 0 0 chr17 58977136 58977202 -36295449 + (GA)n Simple_repeat Simple_repeat 2 68 0 7 1034 325 210 248 16 chr17 58977331 58977452 -36295199 + MLT1A1 LTR MaLR 258 406 -2 7 1034 1775 234 112 48 chr17 58977678 58978180 -36294471 + RMER2 LTR ERV1 22 555 -12 7 1034 3594 33 5 0 chr17 58979016 58979410 -36293241 - MTA_Mm LTR MaLR 0 396 1 7 1034 1915 139 252 31 chr17 58979661 58980114 -36292537 + RLTR6_Mm LTR ERV1 37 589 -65 7 129 65918 34 12 0 chr17 58980114 58987812 -36284839 + RLTR6-int LTR ERV1 1 7778 0 7 1035 1911 134 254 31 chr17 58987925 58988373 -36284278 + RLTR6_Mm LTR ERV1 37 584 -70 7 1035 1940 64 4 23 chr17 58988449 58988705 -36283946 + L1_Mus2 LINE L1 6314 6564 -2 7 1035 413 290 46 81 chr17 58989014 58989299 -36283352 + MuRRS4-int LTR ERV1 1288 1685 -6093 7 1035 310 254 0 0 chr17 58989626 58989693 -36282958 + MuRRS4-int LTR ERV1 2102 2168 -5433 7 1035 809 269 170 39 chr17 58989780 58990186 -36282465 + Lx8 LINE L1 7011 7469 -4 7 1035 1505 143 14 73 chr17 58990528 58990815 -36281836 + ORR1A4 LTR MaLR 4 273 -56 7 1035 180 0 0 0 chr17 58990816 58990836 -36281815 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1035 447 265 24 64 chr17 58991599 58991724 -36280927 + RSINE1 SINE B4 17 136 -29 7 1035 399 56 0 0 chr17 58991724 58991778 -36280873 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 1035 342 312 0 0 chr17 58992010 58992090 -36280561 + B4A SINE B4 1 80 -212 7 1035 330 26 0 0 chr17 58992136 58992175 -36280476 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 1035 536 360 64 6 chr17 58992636 58992809 -36279842 + B4A SINE B4 105 287 -5 7 1035 215 320 10 10 chr17 58992832 58992930 -36279721 + (CATA)n Simple_repeat Simple_repeat 1 98 0 7 1035 811 19 10 0 chr17 58992967 58993070 -36279581 - L1Md_T LINE L1 0 6582 6479 7 1035 6934 33 0 0 chr17 58993073 58993870 -36278781 + L1Md_A LINE L1 5736 6532 -50 7 1035 2801 68 203 0 chr17 58995907 58996320 -36276331 - L1_Mus3 LINE L1 -166 6472 5976 7 1035 2138 59 11 0 chr17 58996316 58996587 -36276064 + L1_Mus3 LINE L1 5708 5981 -657 7 1035 333 261 22 43 chr17 58996861 58996953 -36275698 - B4 SINE B4 0 292 203 7 1035 1632 125 24 14 chr17 58996953 58997245 -36275406 - BGLII LTR ERVK 0 421 127 7 1035 583 62 70 70 chr17 58997245 58997417 -36275234 + CT-rich Low_complexity Low_complexity 1 172 0 7 1035 468 101 59 13 chr17 58997417 58997526 -36275125 - RMER3D-int LTR ERVK -2259 583 489 7 1035 3224 72 40 0 chr17 58997939 58998344 -36274307 - BGLII LTR ERVK 0 421 1 7 1035 879 268 5 10 chr17 58998344 58998536 -36274115 - B4 SINE B4 -84 208 18 7 1035 282 269 16 25 chr17 58998737 58998859 -36273792 + CT-rich Low_complexity Low_complexity 2 122 0 7 1035 186 43 0 0 chr17 58998959 58998982 -36273669 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 7 1035 1226 43 0 0 chr17 58998985 58999124 -36273527 - B1_Mus2 SINE Alu -7 140 2 7 1035 458 317 128 55 chr17 58999361 58999618 -36273033 + B4A SINE B4 1 276 -16 7 1035 228 350 29 19 chr17 58999830 58999935 -36272716 - MIRb SINE MIR -82 186 81 7 1035 429 395 36 0 chr17 59000275 59000442 -36272209 + B3A SINE B2 5 177 -21 1 1035 344 191 0 11 chr17 59000443 59000538 -36272113 + (CATATA)n Simple_repeat Simple_repeat 3 96 0 2 1035 413 333 152 29 chr17 59000618 59000822 -36271829 - B4 SINE B4 0 292 64 3 1035 460 337 29 17 chr17 59000995 59001167 -36271484 - RMER30 DNA MER1_type -27 175 2 4 1035 519 17 0 0 chr17 59001187 59001247 -36271404 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 1035 216 67 0 0 chr17 59001271 59001301 -36271350 + (TA)n Simple_repeat Simple_repeat 2 31 0 6 1035 2483 117 49 8 chr17 59001716 59002105 -36270546 - RLTR9E LTR ERVK 0 409 5 7 1035 1431 224 39 57 chr17 59002244 59002632 -36270019 - ORR1C2 LTR MaLR -3 381 1 8 1035 243 324 0 0 chr17 59003701 59003775 -36268876 + (TG)n Simple_repeat Simple_repeat 1 74 0 9 1035 574 282 79 39 chr17 59003812 59004015 -36268636 - B3 SINE B2 -5 211 1 1 1035 600 298 121 5 chr17 59004015 59004218 -36268433 - B4A SINE B4 -62 230 4 1 1035 204 247 26 13 chr17 59004847 59004925 -36267726 + CT-rich Low_complexity Low_complexity 2 80 0 1 1035 733 273 62 95 chr17 59005482 59005818 -36266833 + MTD LTR MaLR 95 419 0 1 1035 1516 267 62 76 chr17 59005916 59006342 -36266309 + RLTR40 LTR ERVK 4 438 -379 1 1035 207 0 0 0 chr17 59006342 59006365 -36266286 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1035 1516 267 62 76 chr17 59006365 59006606 -36266045 + RLTR40 LTR ERVK 439 662 -155 1 1035 983 97 0 34 chr17 59006606 59006755 -36265896 + B1_Mm SINE Alu 4 147 0 1 1035 1667 271 12 31 chr17 59006813 59007165 -36265486 + MTD LTR MaLR 1 353 -66 1 1035 758 67 9 0 chr17 59007165 59007270 -36265381 + (TC)n Simple_repeat Simple_repeat 2 107 0 1 1035 1667 271 12 31 chr17 59007270 59007339 -36265312 + MTD LTR MaLR 354 414 -5 1 1035 357 75 0 0 chr17 59007742 59007795 -36264856 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1035 259 225 40 53 chr17 59007798 59007873 -36264778 - RSINE1 SINE B4 -14 151 78 2 1035 24 53 0 0 chr17 59008096 59008134 -36264517 + AT_rich Low_complexity Low_complexity 1 38 0 2 1035 263 250 0 0 chr17 59008735 59008799 -36263852 - RMER15 LTR ERVL -105 470 407 2 1035 378 0 0 0 chr17 59008843 59008885 -36263766 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 1035 203 330 85 0 chr17 59009141 59009235 -36263416 - MIRc SINE MIR -120 148 47 2 1035 424 225 11 0 chr17 59011619 59011708 -36260943 - BC1_Mm scRNA scRNA -61 91 2 2 1035 22 70 0 0 chr17 59011878 59011921 -36260730 + AT_rich Low_complexity Low_complexity 1 43 0 2 1035 1380 238 127 8 chr17 59012644 59013013 -36259638 - RMER15 LTR ERVL -3 572 160 2 1035 1464 227 93 8 chr17 59013777 59014163 -36258488 + L1_Mur3 LINE L1 5427 5845 -35 2 1035 1659 219 69 93 chr17 59014159 59014355 -36258296 + Lx7 LINE L1 6804 6991 -705 2 1035 695 151 0 99 chr17 59014355 59014517 -36258134 + Lx4A LINE L1 6911 7056 -2 3 1035 1659 219 69 93 chr17 59014517 59014550 -36258101 + Lx7 LINE L1 6992 7002 -694 2 1035 219 88 0 0 chr17 59014550 59014584 -36258067 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 3 1035 1659 219 69 93 chr17 59014584 59014977 -36257674 + Lx7 LINE L1 7003 7412 -284 2 1035 554 0 15 0 chr17 59015010 59015076 -36257575 + (TC)n Simple_repeat Simple_repeat 2 68 0 3 1035 203 88 0 29 chr17 59015891 59015926 -36256725 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 1035 1055 157 19 88 chr17 59016441 59016657 -36255994 + URR1A DNA MER1_type 5 205 -21 3 1035 185 128 21 0 chr17 59016871 59016918 -36255733 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 3 1035 467 204 18 0 chr17 59017879 59017992 -36254659 + (CATA)n Simple_repeat Simple_repeat 1 115 0 3 1035 1050 146 11 6 chr17 59020259 59020438 -36252213 + B2_Mm1t SINE B2 1 180 -13 3 1035 356 110 14 18 chr17 59020449 59020514 -36252137 + B2_Mm2 SINE B2 46 115 -83 3 1035 204 40 0 0 chr17 59020530 59020555 -36252096 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 3 1035 748 188 100 0 chr17 59021344 59021573 -36251078 + MYSERV16_I-int LTR ERVK 2075 2326 0 4 1035 2984 96 9 5 chr17 59021573 59021992 -36250659 + BGLII LTR ERVK 1 421 0 4 1035 826 243 79 99 chr17 59021993 59022299 -36250352 + Lx9 LINE L1 7148 7422 -222 4 1035 405 0 0 0 chr17 59022299 59022344 -36250307 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1035 826 243 79 99 chr17 59022344 59022544 -36250107 + Lx9 LINE L1 7423 7643 -1 4 1035 444 82 0 0 chr17 59022654 59022715 -36249936 + (TA)n Simple_repeat Simple_repeat 2 62 0 4 1035 1450 221 133 2 chr17 59026053 59026488 -36246163 - Lx9 LINE L1 -44 7600 7109 4 1035 400 309 86 4 chr17 59028442 59028686 -36243965 - L1MB5 LINE L1 -233 5941 5678 4 1035 194 116 23 0 chr17 59030354 59030397 -36242254 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 4 1035 219 146 0 0 chr17 59030936 59030977 -36241674 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 4 1035 213 94 0 0 chr17 59031653 59031685 -36240966 + (GGA)n Simple_repeat Simple_repeat 2 33 0 4 1035 314 280 124 25 chr17 59031692 59031813 -36240838 + ID_B1 SINE B4 82 214 -10 4 1035 347 260 82 20 chr17 59031957 59032055 -36240596 - Tigger7 DNA MER2_type 0 2491 2388 5 1035 342 352 82 11 chr17 59032143 59032327 -36240324 - Tigger7 DNA MER2_type -2199 292 96 5 1035 4531 134 24 8 chr17 59033126 59033928 -36238723 + L1_Mur2 LINE L1 4755 5569 -308 5 1035 1866 189 38 5 chr17 59033929 59034302 -36238349 + Lx5 LINE L1 6198 6582 -468 5 1035 234 143 44 73 chr17 59034452 59034520 -36238131 + LTR41B LTR ERVL 661 726 -32 5 1035 276 47 0 0 chr17 59034542 59034585 -36238066 - L1_Mus1 LINE L1 -2 6565 6523 5 1035 957 199 21 83 chr17 59034578 59035113 -36237538 + L1_Mur3 LINE L1 1853 2298 -3582 5 1035 1901 148 98 13 chr17 59035117 59035515 -36237136 + L1_Mur3 LINE L1 3303 3734 -2146 5 1035 634 316 28 5 chr17 59036433 59036649 -36236002 - MLT1D LTR MaLR -2 503 283 5 1035 369 286 160 28 chr17 59036681 59036825 -36235826 - MLT1D LTR MaLR -287 218 56 5 1035 305 302 75 37 chr17 59037147 59037283 -36235368 + L2a LINE L2 3230 3417 -9 5 1035 239 345 144 0 chr17 59037478 59037617 -36235034 - MIRc SINE MIR -87 181 23 5 1035 1323 85 21 0 chr17 59038531 59038719 -36233932 - L1_Mus1 LINE L1 0 6567 6376 5 1035 3873 57 0 0 chr17 59038719 59039273 -36233378 + L1Md_F2 LINE L1 5376 5929 -653 6 1035 24 53 0 0 chr17 59039580 59039618 -36233033 + AT_rich Low_complexity Low_complexity 1 38 0 6 1035 234 0 0 0 chr17 59039710 59039736 -36232915 + (TC)n Simple_repeat Simple_repeat 1 26 0 6 1035 181 281 99 22 chr17 59040667 59040758 -36231893 + MIRc SINE MIR 60 157 -111 6 1035 304 281 9 111 chr17 59040944 59041052 -36231599 - MER82 DNA MER2_type -13 640 544 6 1035 215 283 0 0 chr17 59042000 59042046 -36230605 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1035 407 263 25 50 chr17 59042047 59042207 -36230444 + Charlie7 DNA MER1_type 1669 1824 -788 6 1035 3391 25 2 8 chr17 59042848 59043246 -36229405 - MTA_Mm LTR MaLR 0 396 1 6 1035 24 0 0 0 chr17 59043885 59043909 -36228742 + AT_rich Low_complexity Low_complexity 1 24 0 6 1035 2279 127 16 11 chr17 59043909 59044276 -36228375 - Lx2 LINE L1 -4 6993 6625 6 1035 852 49 25 0 chr17 59045364 59045486 -36227165 + (TCTA)n Simple_repeat Simple_repeat 2 126 0 7 1035 529 176 8 25 chr17 59046710 59046832 -36225819 + Lx2 LINE L1 6872 6991 -6 7 1035 330 26 0 0 chr17 59047464 59047503 -36225148 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 1035 31 0 0 0 chr17 59047627 59047658 -36224993 + AT_rich Low_complexity Low_complexity 1 31 0 7 1035 225 65 0 0 chr17 59047859 59047890 -36224761 + (TTTG)n Simple_repeat Simple_repeat 3 33 0 7 1035 394 120 27 0 chr17 59049069 59049144 -36223507 + (TTTTC)n Simple_repeat Simple_repeat 4 80 0 7 1035 1617 263 70 30 chr17 59049173 59049733 -36222918 + RCHARR1 DNA MER1_type 46 627 -347 7 1035 363 122 8 18 chr17 59049738 59049803 -36222848 - B2_Mm2 SINE B2 -102 114 47 7 1035 1067 130 59 0 chr17 59049886 59050055 -36222596 + B2_Mm1t SINE B2 2 180 -13 7 1035 354 105 11 51 chr17 59050101 59050167 -36222484 + B2_Mm2 SINE B2 47 115 -83 7 1035 306 0 0 0 chr17 59050177 59050211 -36222440 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 8 1035 1073 117 7 0 chr17 59050223 59050377 -36222274 - B2_Mm1t SINE B2 -38 155 1 8 1035 352 288 17 0 chr17 59050377 59050493 -36222158 + RCHARR1 DNA MER1_type 604 721 -253 7 1035 474 136 0 0 chr17 59050515 59050596 -36222055 + (TCCC)n Simple_repeat Simple_repeat 4 84 0 8 1035 540 246 9 0 chr17 59050605 59050719 -36221932 - B1_Mur2 SINE Alu -22 127 13 8 1035 565 238 0 20 chr17 59050725 59050875 -36221776 + RCHARR1 DNA MER1_type 725 871 -103 7 1035 3952 120 9 0 chr17 59051906 59052489 -36220162 + Lx2 LINE L1 6408 6995 -2 8 1035 340 336 50 0 chr17 59053005 59053145 -36219506 + L1MEg LINE L1 653 799 -5285 8 1035 5679 89 21 3 chr17 59053965 59054971 -36217680 + L1VL2 LINE L1 175 1196 -2419 8 1035 1782 74 0 0 chr17 59054971 59055229 -36217422 + L1VL2 LINE L1 2725 2982 -633 8 1035 34 102 0 0 chr17 59055722 59055840 -36216811 + AT_rich Low_complexity Low_complexity 1 118 0 8 1035 1146 75 0 7 chr17 59055875 59056022 -36216629 + B1_Mm SINE Alu 1 146 -1 8 1035 211 28 56 0 chr17 59056023 59056059 -36216592 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 8 1035 225 0 0 0 chr17 59056464 59056489 -36216162 + (TG)n Simple_repeat Simple_repeat 2 26 0 9 1035 1108 68 0 39 chr17 59056580 59056734 -36215917 + B1_Mus1 SINE Alu 1 148 0 9 1035 207 0 0 0 chr17 59056735 59056758 -36215893 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 9 1035 702 293 68 59 chr17 59056854 59057184 -36215467 + MLT1A0 LTR MaLR 4 335 -30 9 1035 786 168 6 23 chr17 59057599 59057776 -36214875 + CT-rich Low_complexity Low_complexity 4 177 0 9 1035 239 311 13 26 chr17 59057824 59057900 -36214751 + L2b LINE L2 3066 3140 -235 9 1035 511 101 16 25 chr17 59057901 59058023 -36214628 + (CA)n Simple_repeat Simple_repeat 2 122 0 9 1035 210 209 21 21 chr17 59058066 59058208 -36214443 + (CA)n Simple_repeat Simple_repeat 1 142 0 9 1035 836 215 26 82 chr17 59058292 59058525 -36214126 - RMER1C Other Other 0 1342 1123 9 1035 311 232 0 42 chr17 59058583 59058655 -36213996 + LTR41B LTR ERVL 111 179 -579 9 1035 546 326 106 89 chr17 59058888 59059238 -36213413 + LTR41B LTR ERVL 334 689 -69 9 1035 531 170 0 0 chr17 59060208 59060308 -36212343 + C-rich Low_complexity Low_complexity 4 103 0 9 1035 327 49 0 0 chr17 59060306 59060347 -36212304 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 1035 300 143 0 0 chr17 59060960 59061016 -36211635 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1035 229 329 0 56 chr17 59065096 59065186 -36207465 + PB1D10 SINE Alu 26 110 -7 1 1035 222 150 0 0 chr17 59066243 59066283 -36206368 + (TATG)n Simple_repeat Simple_repeat 1 40 0 1 1035 717 12 0 0 chr17 59066283 59066365 -36206286 + (CATATA)n Simple_repeat Simple_repeat 5 86 0 1 1035 23 54 0 0 chr17 59066613 59066650 -36206001 + AT_rich Low_complexity Low_complexity 1 37 0 1 1035 479 193 0 0 chr17 59067001 59067115 -36205536 - Lx9 LINE L1 -26 7618 7505 1 1035 285 258 76 0 chr17 59068436 59068502 -36204149 + B4A SINE B4 2 72 -220 1 1035 240 111 0 0 chr17 59068512 59068548 -36204103 - tRNA-Lys-AAG tRNA tRNA -38 38 3 1 1035 629 353 14 19 chr17 59068568 59068779 -36203872 + B4A SINE B4 83 292 0 1 1035 2984 92 0 0 chr17 59068780 59069180 -36203471 - MTB LTR MaLR 0 400 1 1 1035 186 103 0 0 chr17 59069240 59069269 -36203382 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 1 1035 306 0 0 0 chr17 59071379 59071413 -36201238 + (TC)n Simple_repeat Simple_repeat 1 34 0 1 1035 438 36 0 0 chr17 59071413 59071468 -36201183 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1035 387 0 0 0 chr17 59072033 59072076 -36200575 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 1035 188 218 179 18 chr17 59072309 59072365 -36200286 + MIRc SINE MIR 85 149 -119 1 1035 711 192 173 6 chr17 59072950 59073123 -36199528 - B3 SINE B2 -10 206 5 1 1035 23 33 0 0 chr17 59073131 59073161 -36199490 + AT_rich Low_complexity Low_complexity 1 30 0 1 1035 581 238 35 14 chr17 59073162 59073307 -36199344 - B1_Mur3 SINE Alu 0 149 2 1 1035 180 97 0 0 chr17 59073725 59073756 -36198895 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 1 1035 534 312 47 19 chr17 59073981 59074193 -36198458 + MLT1J1 LTR MaLR 3 220 -224 1 1035 983 34 0 0 chr17 59074798 59074917 -36197734 + B1_Mm SINE Alu 25 143 -4 1 1035 711 0 0 0 chr17 59074918 59074997 -36197654 + (TA)n Simple_repeat Simple_repeat 2 80 0 1 1035 226 300 0 0 chr17 59075153 59075213 -36197438 + tRNA-Ala-GCA tRNA tRNA 1 60 -15 1 1035 25 0 0 0 chr17 59075298 59075323 -36197328 + AT_rich Low_complexity Low_complexity 1 25 0 1 1035 722 363 57 0 chr17 59075425 59075687 -36196964 + B4A SINE B4 6 282 -10 1 1035 180 77 0 0 chr17 59075703 59075729 -36196922 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1035 363 247 7 33 chr17 59075736 59075887 -36196764 + (CAGAGA)n Simple_repeat Simple_repeat 6 152 0 1 1035 254 263 92 0 chr17 59077709 59077785 -36194866 + MTEa LTR MaLR 1 83 -296 1 1035 285 286 0 0 chr17 59077821 59077891 -36194760 + GA-rich Low_complexity Low_complexity 2 71 0 1 1035 234 295 25 139 chr17 59077892 59078014 -36194637 + MTEa LTR MaLR 168 275 -104 1 1035 257 146 0 0 chr17 59078054 59078102 -36194549 - MT2A LTR ERVL 0 533 486 1 1035 282 160 0 0 chr17 59078214 59078264 -36194387 + GA-rich Low_complexity Low_complexity 3 52 0 1 1035 234 0 0 0 chr17 59078344 59078370 -36194281 + (TC)n Simple_repeat Simple_repeat 2 27 0 1 1035 207 188 0 0 chr17 59078372 59078420 -36194231 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 1035 550 246 23 8 chr17 59078465 59078596 -36194055 - MT2A LTR ERVL -316 217 85 1 1035 680 202 0 30 chr17 59078582 59078715 -36193936 - MT2A LTR ERVL -401 132 4 1 1035 570 198 8 0 chr17 59078721 59078847 -36193804 - MERVL_2A-int LTR ERVL -3 5758 5632 1 1035 1071 111 7 0 chr17 59078909 59079053 -36193598 - B1_Mus2 SINE Alu -1 146 2 1 1035 3276 190 41 17 chr17 59079064 59079788 -36192863 - MERVL_2A-int LTR ERVL -125 5636 4895 1 1035 13861 168 63 23 chr17 59079777 59082568 -36190083 - MERVL_2A-int LTR ERVL -1115 4646 1743 1 1035 388 273 83 80 chr17 59082569 59082907 -36189744 + RLTR15 LTR ERVK 3 341 -18 1 1035 1532 85 1 1 chr17 59083184 59083410 -36189241 + Lx3_Mus LINE L1 6227 6475 -534 1 1035 603 85 0 0 chr17 59083947 59084029 -36188622 - L1_Mus4 LINE L1 -464 6172 6091 1 1035 6893 102 6 10 chr17 59084029 59085014 -36187637 + Lx3_Mus LINE L1 6029 7009 0 1 1035 1793 87 0 0 chr17 59085079 59085331 -36187320 - L1_Mus4 LINE L1 -466 6170 5919 1 1035 2717 92 10 3 chr17 59085331 59085722 -36186929 + L1_Mus4 LINE L1 6241 6634 -2 1 1035 327 49 0 0 chr17 59085836 59085877 -36186774 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 1035 978 324 20 27 chr17 59086215 59086398 -36186253 + MurERV4-int LTR ERVK 4555 4737 -523 1 1035 287 65 22 0 chr17 59086398 59086444 -36186207 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 1 1035 978 324 20 27 chr17 59086444 59086707 -36185944 + MurERV4-int LTR ERVK 4738 4998 -262 1 1035 497 231 30 5 chr17 59086726 59086921 -36185730 + MYSERV6-int LTR ERVK 4293 4615 -4344 1 1035 415 217 57 24 chr17 59086936 59087059 -36185592 + MYSERV6-int LTR ERVK 4525 4651 -1899 1 1035 347 352 18 9 chr17 59087688 59087797 -36184854 - PB1D10 SINE Alu -5 112 3 1 1035 839 306 73 17 chr17 59088811 59089220 -36183431 + Lx9 LINE L1 7055 7486 -158 1 1035 369 0 0 0 chr17 59089255 59089296 -36183355 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 1035 678 44 0 0 chr17 59090474 59090564 -36182087 + (TG)n Simple_repeat Simple_repeat 2 91 0 1 1035 24 32 0 0 chr17 59091360 59091391 -36181260 + AT_rich Low_complexity Low_complexity 1 31 0 1 1035 180 321 22 56 chr17 59091668 59091757 -36180894 - L2a LINE L2 -36 3390 3305 1 1035 413 264 225 29 chr17 59093236 59093406 -36179245 - Lx9 LINE L1 0 7644 7418 1 1035 342 0 0 0 chr17 59093406 59093444 -36179207 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1035 413 264 225 29 chr17 59093444 59093589 -36179062 - Lx9 LINE L1 -227 7417 7268 1 1035 23 33 0 0 chr17 59093622 59093652 -36178999 + AT_rich Low_complexity Low_complexity 1 30 0 1 1035 22 35 0 0 chr17 59094098 59094127 -36178524 + AT_rich Low_complexity Low_complexity 1 29 0 1 1035 585 290 34 0 chr17 59094145 59094321 -36178330 + B3A SINE B2 2 183 -15 1 1035 396 0 0 0 chr17 59094325 59094369 -36178282 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1035 234 0 0 0 chr17 59096232 59096258 -36176393 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1035 237 330 66 33 chr17 59097242 59097333 -36175318 + MIR SINE MIR 19 112 -150 1 1035 787 237 77 0 chr17 59097541 59097735 -36174916 - B3 SINE B2 -5 211 3 1 1035 201 133 43 22 chr17 59097798 59097844 -36174807 + CT-rich Low_complexity Low_complexity 3 49 0 1 1035 875 10 0 9 chr17 59097856 59097961 -36174690 + (TTCC)n Simple_repeat Simple_repeat 4 107 0 1 1035 582 325 35 10 chr17 59098689 59098888 -36173763 - MER63A DNA AcHobo -1 209 6 1 1035 236 228 0 0 chr17 59099140 59099197 -36173454 + L1MA6 LINE L1 6130 6186 -114 1 1035 592 304 21 0 chr17 59099216 59099407 -36173244 + Lx6 LINE L1 6083 6277 -1183 1 1035 2359 280 123 11 chr17 59099404 59100227 -36172424 + Lx6 LINE L1 6519 7433 -27 1 1035 4695 250 50 28 chr17 59100687 59101544 -36171107 + Lx6 LINE L1 5800 6737 -959 1 1035 432 0 0 0 chr17 59101544 59101592 -36171059 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1035 4695 242 34 29 chr17 59101592 59102267 -36170384 + Lx6 LINE L1 6727 7401 -59 1 1035 4139 211 61 110 chr17 59102290 59102810 -36169841 + Lx9 LINE L1 6348 6894 -750 1 1035 1022 75 0 0 chr17 59102810 59102944 -36169707 + B2_Mm2 SINE B2 2 135 -60 1 1035 4139 211 61 110 chr17 59102944 59103651 -36169000 + Lx9 LINE L1 6895 7641 -3 1 1035 413 335 97 4 chr17 59103694 59103931 -36168720 + MER110A LTR ERV1 163 421 -47 1 1035 295 257 73 9 chr17 59104031 59104141 -36168510 - LTR33 LTR ERVL -8 507 391 1 1035 360 0 0 0 chr17 59104724 59104764 -36167887 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1035 1181 62 0 0 chr17 59107245 59107391 -36165260 + B1_Mus2 SINE Alu 2 147 0 1 1035 192 143 0 0 chr17 59107391 59107433 -36165218 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1 1035 1168 244 111 3 chr17 59107798 59108176 -36164475 + MTD LTR MaLR 1 419 0 1 1035 340 319 170 25 chr17 59108523 59108806 -36163845 + MLT1A1 LTR MaLR 1 324 -84 1 1035 3100 51 10 7 chr17 59109049 59109464 -36163187 - BGLII LTR ERVK -5 416 1 1 1035 21 0 0 0 chr17 59109785 59109806 -36162845 + AT_rich Low_complexity Low_complexity 1 21 0 1 1035 238 226 107 0 chr17 59110685 59110769 -36161882 + Lx5 LINE L1 6958 7050 0 1 1036 266 336 191 37 chr17 59115712 59115731 -36156920 - RSINE1 SINE B4 -6 159 142 1 1036 180 0 0 0 chr17 59115731 59115751 -36156900 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 1036 264 77 0 0 chr17 59115751 59115790 -36156861 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1036 266 336 191 37 chr17 59115790 59115905 -36156746 - RSINE1 SINE B4 -24 141 4 1 1036 3062 87 8 27 chr17 59115981 59116478 -36156173 + L1VL2 LINE L1 61 753 -5582 1 1036 1621 201 90 3 chr17 59117047 59117402 -36155249 + ORR1B1 LTR MaLR 1 386 -8 1 1036 686 310 32 11 chr17 59117958 59118144 -36154507 - B3 SINE B2 -8 208 19 1 1036 5045 125 21 0 chr17 59120335 59121103 -36151548 - Lx2 LINE L1 -1 6996 6213 1 1036 3217 107 2 25 chr17 59121110 59121639 -36151012 + Lx2 LINE L1 5702 6218 -779 1 1036 261 343 73 36 chr17 59121900 59122148 -36150503 + L2 LINE L2 1826 2082 -1337 1 1036 434 135 10 0 chr17 59122663 59122767 -36149884 + (TTTTTG)n Simple_repeat Simple_repeat 4 108 0 1 1036 1105 69 14 0 chr17 59122773 59122917 -36149734 - B1_Mus1 SINE Alu -2 146 1 1 1036 258 364 130 15 chr17 59122917 59123048 -36149603 + L2 LINE L2 2722 2867 -552 1 1036 183 139 0 0 chr17 59123773 59123809 -36148842 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1036 1376 238 142 0 chr17 59123875 59124240 -36148411 + MTD LTR MaLR 1 417 -2 1 1036 421 310 127 39 chr17 59124308 59124489 -36148162 - B4A SINE B4 -95 197 1 1 1036 5564 80 30 9 chr17 59125333 59126124 -36146527 + RLTR13C2 LTR ERVK 1 808 0 1 1036 312 281 62 56 chr17 59128142 59128304 -36144347 + RSINE1 SINE B4 3 165 0 1 1036 186 227 0 0 chr17 59128309 59128384 -36144267 + (CA)n Simple_repeat Simple_repeat 2 76 0 1 1036 21 0 0 0 chr17 59128835 59128856 -36143795 + AT_rich Low_complexity Low_complexity 1 21 0 1 1036 426 211 100 0 chr17 59129130 59129220 -36143431 + Lx5 LINE L1 6542 6640 -410 1 1036 396 0 0 0 chr17 59129240 59129284 -36143367 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 1 1036 2174 186 113 29 chr17 59129285 59129773 -36142878 - Lx5 LINE L1 -15 7035 6507 1 1036 1112 188 5 5 chr17 59129774 59129967 -36142684 + 7SLRNA srpRNA srpRNA 10 202 -112 1 1036 203 152 0 0 chr17 59130675 59130708 -36141943 + (CATA)n Simple_repeat Simple_repeat 2 34 0 1 1036 640 85 25 17 chr17 59131313 59131433 -36141218 + Lx3_Mus LINE L1 6881 7001 -8 2 1036 554 268 80 27 chr17 59132516 59132704 -36139947 - B3A SINE B2 0 198 1 2 1036 210 312 0 41 chr17 59132855 59132952 -36139699 + GA-rich Low_complexity Low_complexity 1 93 0 2 1036 1058 75 0 0 chr17 59133080 59133214 -36139437 + B1_Mus1 SINE Alu 2 135 -13 2 1036 1177 102 68 0 chr17 59133374 59133550 -36139101 + ORR1A2 LTR MaLR 138 325 -2 2 1036 4246 194 52 18 chr17 59133548 59134511 -36138140 + ORR1A2-int LTR MaLR 1 996 -796 2 1036 580 268 144 9 chr17 59134655 59134870 -36137781 - MTEa LTR MaLR -8 371 128 2 1036 274 267 17 0 chr17 59134888 59134948 -36137703 - MTEa LTR MaLR -307 72 12 2 1036 568 330 62 0 chr17 59135069 59135278 -36137373 + ORR1A2 LTR MaLR 15 236 -123 2 1036 200 100 0 24 chr17 59135575 59135616 -36137035 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 2 1036 225 0 0 0 chr17 59136171 59136196 -36136455 + (TTG)n Simple_repeat Simple_repeat 3 27 0 2 1036 186 43 0 0 chr17 59136215 59136238 -36136413 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 2 1036 475 305 99 69 chr17 59136439 59136687 -36135964 - RLTR25A LTR ERVK 0 1103 639 2 1036 884 222 20 4 chr17 59136687 59136940 -36135711 - ORR1A3-int LTR MaLR -989 974 718 2 1036 1366 171 55 62 chr17 59136899 59137173 -36135478 - MT2B LTR ERVL -314 287 16 2 1036 475 305 99 69 chr17 59136940 59137001 -36135650 - RLTR25A LTR ERVK 0 638 521 2 1036 2432 197 11 90 chr17 59137194 59137752 -36134899 - RLTR25A LTR ERVK -589 514 1 2 1036 530 324 22 62 chr17 59137950 59138080 -36134571 + Lx8 LINE L1 7108 7230 -243 2 1036 387 0 0 0 chr17 59138080 59138123 -36134528 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1036 530 324 22 62 chr17 59138123 59138216 -36134435 + Lx8 LINE L1 7231 7322 -151 2 1036 311 307 56 14 chr17 59138795 59138937 -36133714 - B1F SINE Alu -1 148 1 2 1036 492 81 0 0 chr17 59139316 59139390 -36133261 + (GA)n Simple_repeat Simple_repeat 2 75 0 2 1036 22 35 0 0 chr17 59139861 59139890 -36132761 + AT_rich Low_complexity Low_complexity 1 29 0 2 1036 378 0 0 0 chr17 59140121 59140163 -36132488 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1036 670 270 37 0 chr17 59140206 59140369 -36132282 - B3A SINE B2 -26 172 4 2 1036 752 322 47 0 chr17 59140369 59140592 -36132059 - B4A SINE B4 -58 234 1 2 1036 52 41 0 0 chr17 59142182 59142255 -36130396 + AT_rich Low_complexity Low_complexity 1 73 0 2 1036 341 288 81 6 chr17 59142255 59142352 -36130299 - B1F SINE Alu -13 136 38 2 1036 536 288 20 54 chr17 59143332 59143479 -36129172 - ID_B1 SINE B4 -3 221 80 2 1036 23 0 0 0 chr17 59143607 59143630 -36129021 + AT_rich Low_complexity Low_complexity 1 23 0 2 1036 241 229 54 143 chr17 59143997 59144109 -36128542 + B1F1 SINE Alu 2 103 -14 2 1036 180 0 0 0 chr17 59144169 59144189 -36128462 + (CTG)n Simple_repeat Simple_repeat 1 20 0 2 1036 327 286 154 6 chr17 59144223 59144392 -36128259 + L1M5 LINE L1 5583 5776 -464 2 1036 357 162 0 0 chr17 59144392 59144460 -36128191 + (TA)n Simple_repeat Simple_repeat 2 69 0 2 1036 21 36 0 0 chr17 59144501 59144529 -36128122 + AT_rich Low_complexity Low_complexity 1 28 0 2 1036 406 329 33 14 chr17 59144723 59144933 -36127718 - Lx7 LINE L1 -348 7348 7135 2 1036 486 292 102 5 chr17 59144934 59145120 -36127531 + MIR SINE MIR 6 209 -53 2 1036 455 250 116 41 chr17 59145664 59145810 -36126841 + RSINE1 SINE B4 2 158 -7 2 1036 439 332 69 45 chr17 59146783 59146985 -36125666 + B3A SINE B2 4 210 -6 2 1036 249 108 0 0 chr17 59146987 59147024 -36125627 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 1036 357 62 0 0 chr17 59148743 59148791 -36123860 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1036 374 134 15 0 chr17 59148813 59148880 -36123771 + (TTTCC)n Simple_repeat Simple_repeat 4 71 0 2 1036 227 257 28 28 chr17 59148881 59148953 -36123698 + CT-rich Low_complexity Low_complexity 2 73 0 2 1036 216 0 0 0 chr17 59149248 59149272 -36123379 + (TTCA)n Simple_repeat Simple_repeat 2 25 0 2 1036 324 250 0 65 chr17 59150231 59150308 -36122343 + ID4 SINE ID 11 82 -1 2 1036 285 226 49 57 chr17 59151028 59151150 -36121501 - L1M5 LINE L1 -1122 5024 4904 2 1036 252 0 0 0 chr17 59152947 59152975 -36119676 + (T)n Simple_repeat Simple_repeat 1 28 0 2 1036 180 212 111 83 chr17 59153269 59153341 -36119310 + MIRc SINE MIR 73 146 -122 2 1036 1201 237 28 62 chr17 59153840 59154227 -36118424 + ORR1D1 LTR MaLR 1 374 0 2 1036 1877 190 66 18 chr17 59156086 59156467 -36116184 - MTC LTR MaLR -22 399 1 2 1036 1625 156 162 0 chr17 59156648 59156976 -36115675 - ORR1C2 LTR MaLR 0 384 4 2 1036 213 39 0 0 chr17 59156983 59157009 -36115642 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2 1036 186 286 0 0 chr17 59158822 59158864 -36113787 - L3 LINE CR1 -3186 1303 1262 2 1036 600 156 0 0 chr17 59159077 59159186 -36113465 + CT-rich Low_complexity Low_complexity 4 112 0 2 1036 999 324 42 11 chr17 59160131 59160484 -36112167 + MTE2b LTR MaLR 16 379 0 2 1036 7427 47 3 1 chr17 59161071 59162020 -36110631 - L1_Mus1 LINE L1 -2 6565 5615 2 1036 3506 129 44 42 chr17 59162220 59162861 -36109790 - RLTR26 LTR ERVK 0 642 1 2 1036 231 125 0 0 chr17 59163325 59163365 -36109286 + (TTC)n Simple_repeat Simple_repeat 2 41 0 2 1036 209 173 19 19 chr17 59164757 59164810 -36107841 + (TA)n Simple_repeat Simple_repeat 1 53 0 2 1036 204 240 0 0 chr17 59165411 59165461 -36107190 + T-rich Low_complexity Low_complexity 1 50 0 2 1036 296 218 0 11 chr17 59166195 59166283 -36106368 + (TA)n Simple_repeat Simple_repeat 1 87 0 2 1036 30 77 0 0 chr17 59166351 59166416 -36106235 + AT_rich Low_complexity Low_complexity 1 65 0 2 1036 616 326 0 0 chr17 59167216 59167351 -36105300 + RSINE1 SINE B4 16 150 -15 2 1036 1165 314 97 29 chr17 59167638 59168258 -36104393 + Lx8 LINE L1 6803 7464 -9 2 1036 5255 152 26 1 chr17 59169028 59169909 -36102742 - Lx2 LINE L1 -2 6995 6093 2 1036 5797 140 9 13 chr17 59169909 59171224 -36101427 + Lx2 LINE L1 4774 6080 -917 2 1036 30 59 0 0 chr17 59171417 59171468 -36101183 + AT_rich Low_complexity Low_complexity 1 51 0 2 1036 1415 269 31 45 chr17 59172079 59172496 -36100155 - MTE2a LTR MaLR 0 419 3 2 1036 381 305 67 22 chr17 59172609 59172787 -36099864 + MIR SINE MIR 29 214 -48 2 1036 281 267 53 0 chr17 59173007 59173082 -36099569 + B1_Mur1 SINE Alu 71 149 0 2 1036 227 220 35 35 chr17 59173409 59173480 -36099171 - MIRc SINE MIR -147 121 44 2 1036 551 344 6 18 chr17 59173562 59173725 -36098926 + RSINE1 SINE B4 2 162 -3 2 1036 777 273 20 20 chr17 59174044 59174063 -36098588 - B3A SINE B2 0 198 184 2 1036 279 0 0 0 chr17 59174063 59174094 -36098557 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 1036 777 273 20 20 chr17 59174094 59174272 -36098379 - B3A SINE B2 -15 183 2 2 1036 5401 43 7 5 chr17 59175032 59175706 -36096945 + L1Md_F3 LINE L1 5909 6584 0 2 1036 2518 58 55 0 chr17 59176192 59176456 -36096195 + ORR1A1 LTR MaLR 1 278 -68 2 1036 279 0 0 0 chr17 59176456 59176487 -36096164 + (TTG)n Simple_repeat Simple_repeat 2 32 0 2 1036 2518 58 55 0 chr17 59176487 59176549 -36096102 + ORR1A1 LTR MaLR 279 343 -3 2 1036 24 0 0 0 chr17 59177386 59177410 -36095241 + AT_rich Low_complexity Low_complexity 1 24 0 2 1036 792 202 59 178 chr17 59177628 59177721 -36094930 - MTD LTR MaLR 0 419 366 2 1036 306 0 0 0 chr17 59177721 59177755 -36094896 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 2 1036 792 202 59 178 chr17 59177755 59177914 -36094737 - MTD LTR MaLR -54 365 197 2 1036 771 250 95 0 chr17 59177991 59178191 -36094460 - MTD LTR MaLR -192 227 9 2 1036 564 42 0 0 chr17 59178297 59178368 -36094283 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 2 1036 1399 68 6 0 chr17 59178368 59178545 -36094106 - B2_Mm1t SINE B2 -15 178 1 2 1036 341 58 0 19 chr17 59179539 59179592 -36093059 + (TTTTG)n Simple_repeat Simple_repeat 1 52 0 2 1036 1190 62 0 0 chr17 59179593 59179739 -36092912 - B1_Mus2 SINE Alu -1 146 1 2 1036 502 264 72 72 chr17 59180719 59180927 -36091724 + ID_B1 SINE B4 3 210 -14 2 1036 324 0 0 0 chr17 59180927 59180963 -36091688 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 1036 253 133 0 62 chr17 59181106 59181170 -36091481 - Lx LINE L1 -286 6368 6309 2 1036 1598 97 12 8 chr17 59181172 59181422 -36091229 + Lx LINE L1 6400 6650 -4 2 1036 333 0 0 0 chr17 59183418 59183455 -36089196 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1036 244 178 62 88 chr17 59183467 59183547 -36089104 - B3 SINE B2 -137 79 2 2 1036 197 180 20 0 chr17 59183920 59183970 -36088681 + GA-rich Low_complexity Low_complexity 1 51 0 2 1036 36655 16 1 8 chr17 59184296 59190770 -36081881 + L1Md_A LINE L1 1 5586 -297 2 1036 8825 15 0 0 chr17 59190770 59191766 -36080885 + L1Md_A LINE L1 5587 6582 0 2 1036 24 32 0 0 chr17 59192105 59192136 -36080515 + AT_rich Low_complexity Low_complexity 1 31 0 2 1036 360 43 0 0 chr17 59192379 59192425 -36080226 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1036 231 231 128 95 chr17 59194404 59194552 -36078099 + LTR90B LTR LTR 268 420 -376 2 1036 439 225 23 15 chr17 59194721 59194852 -36077799 - Lx7 LINE L1 -18 7678 7547 2 1036 26 0 0 0 chr17 59194963 59194989 -36077662 + AT_rich Low_complexity Low_complexity 1 26 0 2 1036 843 258 50 0 chr17 59194989 59195088 -36077563 - Lx7 LINE L1 -335 7361 7263 2 1036 3053 76 5 16 chr17 59195088 59195514 -36077137 - BGLII LTR ERVK 0 421 1 2 1036 843 258 50 0 chr17 59195514 59195635 -36077016 - Lx7 LINE L1 -434 7262 7131 2 1036 570 165 0 0 chr17 59196484 59196587 -36076064 + GA-rich Low_complexity Low_complexity 2 104 0 2 1036 310 364 99 34 chr17 59199392 59199685 -36072966 + L2 LINE L2 177 488 -2931 2 1036 274 350 25 25 chr17 59199972 59200092 -36072559 + MTEa LTR MaLR 27 146 -233 2 1036 548 354 49 46 chr17 59200080 59200409 -36072242 + MT2A LTR ERVL 135 464 -69 2 1036 233 192 38 25 chr17 59200413 59200493 -36072158 + (TA)n Simple_repeat Simple_repeat 1 81 0 2 1036 431 324 108 30 chr17 59200541 59200837 -36071814 - MLT1D LTR MaLR -2 503 185 2 1036 703 300 25 98 chr17 59201425 59201710 -36070941 - MLT1D LTR MaLR -239 266 3 2 1036 4402 8 0 24 chr17 59201921 59202426 -36070225 - MT2_Mm LTR ERVL 0 493 1 2 1036 299 289 173 116 chr17 59202426 59202755 -36069896 + LTR79 LTR ERVL 39 386 -141 2 1036 472 330 127 60 chr17 59203231 59203587 -36069064 + ORR1E LTR MaLR 1 371 -8 2 1036 476 246 203 29 chr17 59203685 59203823 -36068828 - RSINE1 SINE B4 0 165 4 3 1036 915 10 0 0 chr17 59204457 59204561 -36068090 + (GAA)n Simple_repeat Simple_repeat 3 106 0 3 1036 312 294 39 8 chr17 59205578 59205705 -36066946 - B1_Mus2 SINE Alu -16 131 1 3 1036 425 288 8 0 chr17 59206105 59206223 -36066428 - LTR16A LTR ERVL -1 450 332 3 1036 288 0 0 0 chr17 59206318 59206350 -36066301 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1036 246 123 53 0 chr17 59206350 59206407 -36066244 + (TA)n Simple_repeat Simple_repeat 1 60 0 3 1036 25 0 0 0 chr17 59206540 59206565 -36066086 + AT_rich Low_complexity Low_complexity 1 25 0 3 1036 1676 122 56 0 chr17 59207079 59207349 -36065302 + Lx4A LINE L1 6772 7056 -2 3 1036 24 0 0 0 chr17 59207355 59207379 -36065272 + AT_rich Low_complexity Low_complexity 1 24 0 3 1036 231 398 38 43 chr17 59207380 59207774 -36064877 - L2 LINE L2 -467 2952 2561 3 1036 591 68 0 0 chr17 59208130 59208203 -36064448 + tRNA-Val-GTG tRNA tRNA 1 73 -3 3 1036 805 341 108 38 chr17 59209521 59210375 -36062276 + L2 LINE L2 1850 2763 -656 3 1036 530 202 0 0 chr17 59210521 59210615 -36062036 + Lx6 LINE L1 6405 6498 -962 3 1036 1141 120 6 0 chr17 59210615 59210790 -36061861 - RMER6C LTR ERVK 0 690 515 3 1036 6122 65 8 5 chr17 59211190 59212047 -36060604 - L1Md_F2 LINE L1 0 6582 5723 3 1036 316 327 45 45 chr17 59212531 59212752 -36059899 + MER58A DNA MER1_type 4 224 0 3 1036 741 23 0 0 chr17 59213040 59213127 -36059524 + (TTCCC)n Simple_repeat Simple_repeat 4 90 0 3 1036 477 254 0 0 chr17 59213127 59213257 -36059394 + T-rich Low_complexity Low_complexity 1 130 0 3 1036 667 144 30 24 chr17 59214084 59214248 -36058403 - Lx9 LINE L1 -3 7641 7477 3 1036 201 182 0 0 chr17 59214248 59214281 -36058370 + (TA)n Simple_repeat Simple_repeat 1 33 0 3 1036 1248 187 44 50 chr17 59214281 59214624 -36058027 - Lx9 LINE L1 -127 7517 7177 3 1036 831 128 0 0 chr17 59215280 59215421 -36057230 + (CA)n Simple_repeat Simple_repeat 2 142 0 3 1036 1543 187 71 25 chr17 59215422 59215790 -36056861 - Lx9 LINE L1 -188 7456 7072 3 1036 216 0 0 0 chr17 59217065 59217089 -36055562 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1036 38 39 0 0 chr17 59217573 59217625 -36055026 + AT_rich Low_complexity Low_complexity 1 52 0 3 1036 468 0 0 0 chr17 59218070 59218122 -36054529 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 1036 976 73 70 35 chr17 59219537 59219679 -36052972 + B1_Mm SINE Alu 1 147 0 3 1036 252 111 0 0 chr17 59219680 59219725 -36052926 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 3 1036 727 173 15 0 chr17 59219809 59219942 -36052709 + Lx9 LINE L1 7322 7456 -188 3 1036 11732 147 52 5 chr17 59219979 59222264 -36050387 - Lx4A LINE L1 0 7058 4665 3 1036 203 61 30 0 chr17 59222264 59222297 -36050354 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 3 1036 20710 123 11 38 chr17 59222297 59224572 -36048079 - Lx4A LINE L1 -1213 4664 2475 3 1036 5746 64 1 0 chr17 59224572 59225308 -36047343 - L1Md_F2 LINE L1 -12 6570 5834 3 1036 20710 123 11 38 chr17 59225308 59225674 -36046977 - Lx4A LINE L1 -3403 2474 2119 3 1036 689 284 246 22 chr17 59226294 59226647 -36046004 - RMER20B LTR ERVK -38 589 173 3 1036 341 131 16 0 chr17 59226941 59227002 -36045649 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 1036 615 167 9 0 chr17 59227782 59227890 -36044761 + B1_Mur2 SINE Alu 41 149 0 3 1036 600 313 48 32 chr17 59229614 59229802 -36042849 - B4A SINE B4 -101 191 1 3 1036 181 0 69 0 chr17 59230176 59230205 -36042446 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 3 1036 274 320 82 49 chr17 59230466 59230650 -36042001 - B3 SINE B2 -2 193 4 3 1036 222 61 40 20 chr17 59230650 59230700 -36041951 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 3 1036 286 335 120 44 chr17 59230924 59231149 -36041502 + L2a LINE L2 2838 3079 -340 3 1036 269 305 72 76 chr17 59231505 59231804 -36040847 + L2a LINE L2 3080 3424 -2 3 1036 230 266 106 0 chr17 59232550 59232644 -36040007 + MIRc SINE MIR 124 227 -41 3 1036 188 34 0 33 chr17 59233319 59233349 -36039302 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1036 1175 19 12 12 chr17 59233367 59233527 -36039124 + (TCTA)n Simple_repeat Simple_repeat 2 161 0 3 1036 363 216 149 0 chr17 59233668 59233742 -36038909 - B4A SINE B4 -207 85 1 3 1036 511 378 46 27 chr17 59234082 59234343 -36038308 - LTR16B1 LTR ERVL -212 268 3 3 1036 542 290 153 33 chr17 59234649 59235396 -36037255 - L1MA9 LINE L1 -459 5853 5002 3 1036 23 54 0 0 chr17 59235624 59235661 -36036990 + AT_rich Low_complexity Low_complexity 1 37 0 3 1036 738 254 109 0 chr17 59235914 59236107 -36036544 + B3 SINE B2 3 216 0 3 1036 21 0 0 0 chr17 59236212 59236233 -36036418 + AT_rich Low_complexity Low_complexity 1 21 0 3 1036 704 296 96 55 chr17 59236454 59236873 -36035778 - Lx9 LINE L1 -1649 5995 5517 3 1036 1273 98 33 0 chr17 59236873 59237056 -36035595 + B2_Mm2 SINE B2 3 191 -4 3 1036 704 291 72 69 chr17 59237056 59237250 -36035401 - Lx9 LINE L1 -721 5579 5386 3 1036 342 0 0 0 chr17 59237256 59237294 -36035357 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1036 437 97 14 0 chr17 59237313 59237385 -36035266 + (GA)n Simple_repeat Simple_repeat 2 74 0 3 1036 335 282 0 0 chr17 59237540 59237625 -36035026 - Lx7 LINE L1 -1957 5739 5655 3 1036 349 301 52 84 chr17 59237985 59238087 -36034564 - L1MC4 LINE L1 -4374 1841 1739 3 1036 279 0 0 0 chr17 59238087 59238118 -36034533 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1036 1013 116 0 0 chr17 59238118 59238256 -36034395 - B1_Mus1 SINE Alu -9 139 2 3 1036 349 301 52 84 chr17 59238256 59238402 -36034249 - L1MC4 LINE L1 -4477 1738 1601 3 1036 246 128 0 0 chr17 59238402 59238441 -36034210 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 1036 318 323 81 44 chr17 59238465 59238760 -36033891 - L1MC4 LINE L1 -4664 1551 1246 3 1036 228 302 116 6 chr17 59239025 59239198 -36033453 - L1MB8 LINE L1 -190 5988 5797 3 1036 1103 38 0 0 chr17 59239398 59239529 -36033122 - L1Md_F2 LINE L1 -628 5954 5824 3 1036 4895 43 0 11 chr17 59239529 59240139 -36032512 + L1Md_F2 LINE L1 5979 6581 -1 3 1036 200 214 0 0 chr17 59240341 59240383 -36032268 - MIRb SINE MIR -37 231 190 3 1036 23 0 0 0 chr17 59240698 59240721 -36031930 + AT_rich Low_complexity Low_complexity 1 23 0 3 1036 22 70 0 0 chr17 59240829 59240872 -36031779 + AT_rich Low_complexity Low_complexity 1 43 0 3 1036 1760 292 88 30 chr17 59241221 59242157 -36030494 - Lx9 LINE L1 -27 7617 6597 3 1036 3335 30 5 2 chr17 59242161 59242556 -36030095 - MTA_Mm LTR MaLR 0 396 1 3 1036 5488 59 15 15 chr17 59242556 59243341 -36029310 - MTA_Mm-int LTR MaLR 0 1258 377 3 1036 281 24 0 47 chr17 59243341 59243384 -36029267 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 3 1036 3805 172 86 143 chr17 59243384 59243932 -36028719 - MTA_Mm-int LTR MaLR -748 510 2 3 1036 2831 40 3 0 chr17 59243931 59244279 -36028372 - MTA_Mm LTR MaLR 0 396 48 3 1036 684 311 43 27 chr17 59244282 59244540 -36028111 - Lx9 LINE L1 -1055 6589 6328 3 1037 1745 218 35 27 chr17 59246122 59246327 -36026324 - ORR1C1 LTR MaLR -1 377 167 3 1037 780 83 0 0 chr17 59246327 59246436 -36026215 + (GGGAGA)n Simple_repeat Simple_repeat 1 109 0 3 1037 1745 218 35 27 chr17 59246436 59246597 -36026054 - ORR1C1 LTR MaLR -212 166 8 3 1037 2004 104 10 3 chr17 59247159 59247458 -36025193 - L1_Mus2 LINE L1 0 6566 6266 3 1037 4976 100 7 24 chr17 59248487 59249217 -36023434 + Lx LINE L1 5917 6638 -16 3 1037 234 0 0 0 chr17 59249217 59249243 -36023408 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 3 1037 4976 100 7 24 chr17 59249243 59249262 -36023389 + Lx LINE L1 6639 6653 -1 3 1037 1800 260 41 4 chr17 59249312 59249775 -36022876 - Lx7 LINE L1 -365 7331 6852 3 1037 538 246 139 21 chr17 59249837 59250074 -36022577 - RLTR10A LTR ERVK 0 411 147 3 1037 22 35 0 0 chr17 59250644 59250673 -36021978 + AT_rich Low_complexity Low_complexity 1 29 0 3 1037 22 0 0 0 chr17 59251516 59251538 -36021113 + AT_rich Low_complexity Low_complexity 1 22 0 3 1037 207 200 0 0 chr17 59251640 59251680 -36020971 + CT-rich Low_complexity Low_complexity 4 43 0 3 1037 417 70 0 0 chr17 59252250 59252307 -36020344 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 1037 180 0 0 0 chr17 59252884 59252904 -36019747 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 3 1037 280 273 16 16 chr17 59253152 59253275 -36019376 + GA-rich Low_complexity Low_complexity 1 123 0 3 1037 1645 36 0 0 chr17 59254020 59254212 -36018439 - B2_Mm1a SINE B2 0 193 2 3 1037 935 246 0 10 chr17 59255305 59255502 -36017149 + MTD LTR MaLR 17 211 -208 3 1037 1359 115 0 0 chr17 59255503 59255695 -36016956 - Lx2 LINE L1 -427 6570 6379 3 1037 2002 128 41 54 chr17 59255706 59256094 -36016557 + Lx2 LINE L1 6613 6995 -2 3 1037 736 254 76 9 chr17 59256104 59256315 -36016336 + MTD LTR MaLR 196 420 -1 3 1037 296 284 0 64 chr17 59256322 59256416 -36016235 + PB1D10 SINE Alu 29 116 -1 3 1037 207 0 0 0 chr17 59256500 59256523 -36016128 + (TAA)n Simple_repeat Simple_repeat 2 24 0 3 1037 1661 214 6 15 chr17 59258222 59258549 -36014102 + Lx5 LINE L1 6335 6658 -392 3 1037 516 295 0 0 chr17 59259313 59259425 -36013226 - RSINE1 SINE B4 -51 114 3 3 1037 341 289 82 29 chr17 59260469 59260640 -36012011 - Lx7 LINE L1 -1507 6189 6010 3 1037 2261 205 36 18 chr17 59260631 59261257 -36011394 + Lx7 LINE L1 5344 5979 -1717 3 1037 303 345 84 42 chr17 59261904 59262119 -36010532 - MIR SINE MIR -2 260 37 3 1037 184 383 54 8 chr17 59262511 59262640 -36010011 - MIRc SINE MIR -20 248 114 3 1037 24 0 0 0 chr17 59262713 59262737 -36009914 + AT_rich Low_complexity Low_complexity 1 24 0 3 1037 413 196 65 0 chr17 59262737 59262844 -36009807 - Lx9 LINE L1 -11 7633 7520 3 1037 22 70 0 0 chr17 59263334 59263377 -36009274 + AT_rich Low_complexity Low_complexity 1 43 0 3 1037 1443 256 75 10 chr17 59263575 59263962 -36008689 + MTD LTR MaLR 6 417 -2 3 1037 281 222 16 0 chr17 59264374 59264437 -36008214 + MIRb SINE MIR 65 128 -140 3 1037 180 0 0 0 chr17 59265046 59265066 -36007585 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 1037 261 0 0 0 chr17 59266662 59266691 -36005960 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1037 318 345 42 28 chr17 59268173 59268316 -36004335 - MIR SINE MIR -111 151 7 3 1037 180 0 0 0 chr17 59268325 59268345 -36004306 + (GA)n Simple_repeat Simple_repeat 1 20 0 3 1037 2227 142 16 18 chr17 59268597 59268977 -36003674 + Lx LINE L1 6276 6654 0 3 1037 399 56 0 0 chr17 59269198 59269252 -36003399 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1037 21 0 0 0 chr17 59270169 59270190 -36002461 + AT_rich Low_complexity Low_complexity 1 21 0 3 1037 577 334 82 55 chr17 59270438 59270805 -36001846 - MLT1B LTR MaLR -8 382 6 4 1037 229 64 42 21 chr17 59270940 59270988 -36001663 + (TTTTTG)n Simple_repeat Simple_repeat 2 50 0 4 1037 6279 52 9 0 chr17 59271303 59272086 -36000565 - L1Md_F2 LINE L1 0 6582 5793 4 1037 362 315 186 20 chr17 59272746 59272950 -35999701 - MIRb SINE MIR -23 245 8 4 1037 387 0 0 0 chr17 59273109 59273152 -35999499 + (T)n Simple_repeat Simple_repeat 1 43 0 4 1037 383 329 41 27 chr17 59274148 59274295 -35998356 - B1F SINE Alu 0 149 1 4 1037 275 351 125 66 chr17 59276085 59276405 -35996246 + L2 LINE L2 1428 1766 -1653 4 1037 543 151 0 0 chr17 59277556 59277649 -35995002 + CT-rich Low_complexity Low_complexity 2 94 0 4 1037 189 0 0 0 chr17 59277645 59277666 -35994985 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 4 1037 1104 89 7 0 chr17 59277666 59277812 -35994839 - B1_Mm SINE Alu 0 147 1 4 1037 195 310 44 44 chr17 59278066 59278157 -35994494 + MIRm SINE MIR 186 276 0 4 1037 258 252 55 55 chr17 59280151 59280260 -35992391 - B1_Mm SINE Alu -34 113 5 4 1037 241 190 17 0 chr17 59280899 59280957 -35991694 + A-rich Low_complexity Low_complexity 3 61 0 4 1037 326 264 99 46 chr17 59281103 59281234 -35991417 + RSINE1 SINE B4 3 140 -25 4 1037 1259 151 0 41 chr17 59282167 59282409 -35990242 - Lx LINE L1 0 6654 6423 4 1037 1582 146 27 4 chr17 59282409 59282670 -35989981 + Lx LINE L1 6074 6340 -314 4 1037 415 177 0 20 chr17 59286909 59286997 -35985654 + (TA)n Simple_repeat Simple_repeat 1 87 0 4 1037 300 27 0 0 chr17 59286997 59287034 -35985617 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1037 415 177 0 20 chr17 59287034 59287043 -35985608 + (TA)n Simple_repeat Simple_repeat 2 10 0 4 1037 571 336 21 7 chr17 59288853 59289138 -35983513 + B4A SINE B4 2 290 -2 4 1037 426 20 0 0 chr17 59289145 59289196 -35983455 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 1037 478 230 27 94 chr17 59290185 59290334 -35982317 - B1_Mur2 SINE Alu -8 141 3 4 1037 22 0 0 0 chr17 59290639 59290661 -35981990 + AT_rich Low_complexity Low_complexity 1 22 0 4 1037 231 231 62 0 chr17 59290995 59291060 -35981591 + L1_Rod LINE L1 5387 5455 -392 4 1037 2054 133 9 9 chr17 59291062 59291388 -35981263 + ORR1A3 LTR MaLR 1 326 0 4 1037 643 323 68 66 chr17 59291769 59292150 -35980501 + MLT2D LTR ERVL 29 410 -4 4 1037 232 362 127 29 chr17 59292197 59292544 -35980107 + MLT1L LTR MaLR 227 607 -3 4 1037 6270 135 60 5 chr17 59293194 59294870 -35977781 - Lx LINE L1 -8 6646 4878 4 1037 577 270 132 5 chr17 59295884 59296074 -35976577 - B3 SINE B2 0 216 3 4 1037 367 316 96 15 chr17 59297166 59297301 -35975350 - Lx8 LINE L1 -206 7267 7122 4 1037 2695 171 65 2 chr17 59297523 59298014 -35974637 - Lx2 LINE L1 0 6997 6476 4 1037 1870 188 13 19 chr17 59298647 59299022 -35973629 + RLTR28 LTR ERVL 29 401 -123 4 1037 4926 66 14 3 chr17 59299023 59299679 -35972972 - L1_Mus2 LINE L1 0 6566 5904 4 1037 14457 110 5 6 chr17 59299679 59301896 -35970755 - L1_Mm LINE L1 -473 5410 3198 4 1037 410 236 9 0 chr17 59301896 59302002 -35970649 + RLTR28 LTR ERVL 387 493 -31 4 1037 2073 117 43 3 chr17 59302024 59302351 -35970300 - L1_Mus3 LINE L1 -5 6633 6294 4 1037 794 331 14 14 chr17 59302520 59302796 -35969855 + RMER15 LTR ERVL 285 560 -15 4 1037 22 0 0 0 chr17 59303317 59303339 -35969312 + AT_rich Low_complexity Low_complexity 1 22 0 4 1037 738 277 143 14 chr17 59304417 59304842 -35967809 - Lx8 LINE L1 -389 7084 6605 4 1037 483 18 0 0 chr17 59305099 59305155 -35967496 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 1037 544 300 14 21 chr17 59305169 59305312 -35967339 - RSINE1 SINE B4 -21 144 3 4 1037 216 0 0 0 chr17 59306560 59306584 -35966067 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1037 213 256 38 13 chr17 59307663 59307742 -35964909 + CT-rich Low_complexity Low_complexity 1 81 0 4 1037 308 373 0 7 chr17 59307742 59307885 -35964766 - B1F SINE Alu -7 142 1 4 1037 314 184 0 13 chr17 59307974 59308051 -35964600 + (TA)n Simple_repeat Simple_repeat 1 76 0 4 1037 320 303 36 40 chr17 59308304 59308469 -35964182 - Lx8 LINE L1 -602 7042 6804 4 1037 532 99 0 0 chr17 59308474 59308545 -35964106 - L1_Mur1 LINE L1 -315 5571 5501 4 1037 300 156 26 13 chr17 59308536 59308614 -35964037 + Lx2 LINE L1 6916 6994 -3 4 1037 1188 251 13 44 chr17 59308594 59308981 -35963670 + L1_Rod LINE L1 5217 5591 -256 4 1037 333 216 0 13 chr17 59308993 59309068 -35963583 + URR1B DNA MER1_type 152 225 0 4 1037 314 280 101 11 chr17 59309070 59309258 -35963393 + Lx9 LINE L1 7309 7513 -131 4 1037 201 198 35 18 chr17 59309267 59309380 -35963271 + (TA)n Simple_repeat Simple_repeat 1 115 0 4 1037 779 300 108 43 chr17 59311050 59311468 -35961183 + L1MC1 LINE L1 5383 5827 -506 4 1037 189 0 0 0 chr17 59312298 59312319 -35960332 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 4 1037 243 0 0 0 chr17 59313056 59313083 -35959568 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 4 1037 982 69 0 0 chr17 59313093 59313224 -35959427 - L1_Mus1 LINE L1 0 6567 6437 4 1037 284 0 28 0 chr17 59313678 59313714 -35958937 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 4 1037 194 200 18 0 chr17 59314011 59314023 -35958628 + (TATATG)n Simple_repeat Simple_repeat 4 15 0 4 1037 225 0 0 0 chr17 59314023 59314048 -35958603 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1037 194 200 18 0 chr17 59314048 59314090 -35958561 + (TATATG)n Simple_repeat Simple_repeat 3 45 0 4 1037 3848 136 18 5 chr17 59314431 59315053 -35957598 - Lx2A1 LINE L1 -6 7002 6373 4 1037 213 39 0 0 chr17 59315056 59315082 -35957569 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 4 1037 2136 137 99 5 chr17 59315143 59315547 -35957104 - RLTR11B LTR ERVK -11 442 1 4 1037 2228 169 38 31 chr17 59315551 59315972 -35956679 - Lx4B LINE L1 -76 6982 6559 4 1037 5390 84 12 9 chr17 59316041 59316795 -35955856 - L1_Mus3 LINE L1 -15 6623 5868 4 1037 356 346 49 62 chr17 59316807 59317032 -35955619 + LFSINE_Vert SINE SINE 163 384 -75 4 1037 238 236 241 6 chr17 59318540 59318706 -35953945 - HAL1 LINE L1 -1075 1432 1228 4 1037 415 156 43 6 chr17 59319490 59319651 -35953000 + (TCTA)n Simple_repeat Simple_repeat 4 170 0 4 1037 1150 269 102 50 chr17 59319690 59320113 -35952538 + Lx8 LINE L1 7023 7467 -6 4 1037 255 229 0 0 chr17 59320224 59320285 -35952366 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 1037 242 226 147 21 chr17 59320376 59320471 -35952180 + MLT1K LTR MaLR 49 155 -440 4 1037 250 391 22 7 chr17 59320614 59320753 -35951898 + MLT1K LTR MaLR 342 482 -113 4 1037 212 413 18 9 chr17 59320869 59320979 -35951672 + PB1D7 SINE Alu 3 113 -7 4 1037 311 327 8 60 chr17 59321345 59321360 -35951291 - PB1D10 SINE Alu -5 112 7 4 1037 387 281 10 10 chr17 59321360 59321457 -35951194 - ID_B1 SINE B4 -40 184 88 4 1037 209 33 33 0 chr17 59323193 59323223 -35949428 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 4 1037 258 152 0 0 chr17 59323577 59323636 -35949015 + A-rich Low_complexity Low_complexity 1 59 0 4 1037 1025 113 0 59 chr17 59323991 59324160 -35948491 + B2_Mm1t SINE B2 7 165 -28 4 1037 1113 40 0 0 chr17 59324865 59325014 -35947637 - L1Md_F2 LINE L1 0 6582 6434 4 1037 246 62 0 0 chr17 59325807 59325839 -35946812 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1037 213 39 0 0 chr17 59326377 59326403 -35946248 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 4 1037 645 216 7 26 chr17 59328594 59328746 -35943905 - B1_Mur1 SINE Alu 0 149 1 4 1037 251 274 16 0 chr17 59328773 59328835 -35943816 - B1_Mur3 SINE Alu 0 149 87 4 1037 1789 55 0 29 chr17 59328878 59329119 -35943532 - L1_Mus1 LINE L1 0 6567 6334 4 1037 798 305 28 83 chr17 59329126 59329441 -35943210 + ORR1E LTR MaLR 39 335 -24 4 1037 246 62 0 0 chr17 59329441 59329473 -35943178 + (CAA)n Simple_repeat Simple_repeat 3 34 0 4 1037 23 0 0 0 chr17 59329593 59329616 -35943035 + AT_rich Low_complexity Low_complexity 1 23 0 4 1037 1071 105 0 6 chr17 59330060 59330232 -35942419 + L1_Mus4 LINE L1 6454 6624 -12 4 1037 17582 99 11 57 chr17 59330714 59332166 -35940485 - L1_Mur1 LINE L1 -1012 4874 3553 4 1037 1600 21 0 0 chr17 59332166 59332356 -35940295 - L1Md_F2 LINE L1 -12 6570 6381 4 1037 17582 99 11 57 chr17 59332356 59333352 -35939299 - L1_Mur1 LINE L1 -2334 3552 2568 4 1037 1039 116 0 0 chr17 59333352 59333499 -35939152 - B1_Mm SINE Alu 0 147 1 4 1037 16446 96 7 20 chr17 59333499 59334904 -35937747 - L1_Mur1 LINE L1 -3319 2567 1168 4 1037 1906 202 19 24 chr17 59334904 59335534 -35937117 - L1_Mur1 LINE L1 -5967 1017 4 4 1037 390 317 40 47 chr17 59335730 59336005 -35936646 + B4A SINE B4 2 274 -18 4 1037 234 150 0 0 chr17 59336121 59336161 -35936490 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1037 24 32 0 0 chr17 59336752 59336783 -35935868 + AT_rich Low_complexity Low_complexity 1 31 0 4 1037 1031 49 0 89 chr17 59337568 59337726 -35934925 + B1_Mm SINE Alu 2 145 -2 4 1037 631 79 110 8 chr17 59338444 59338571 -35934080 - Lx2 LINE L1 -1 6996 6857 4 1037 515 96 12 0 chr17 59338576 59338659 -35933992 + (TA)n Simple_repeat Simple_repeat 1 84 0 4 1037 773 201 17 113 chr17 59338854 59339084 -35933567 + B3 SINE B2 3 210 -6 4 1037 7668 118 38 44 chr17 59339104 59340385 -35932266 - Lx3A LINE L1 -88 6893 5621 4 1037 809 164 40 0 chr17 59340390 59340542 -35932109 + Lx2 LINE L1 6805 6962 -35 4 1037 1115 244 66 76 chr17 59340673 59341068 -35931583 + Lx7 LINE L1 6926 7316 -380 4 1037 368 192 8 46 chr17 59341091 59341222 -35931429 + CT-rich Low_complexity Low_complexity 4 129 0 4 1037 1015 120 0 68 chr17 59341234 59341440 -35931211 - Lx LINE L1 0 6654 6463 4 1037 644 222 106 30 chr17 59341458 59341707 -35930944 + Lx7 LINE L1 7407 7673 -23 4 1037 225 0 0 0 chr17 59341707 59341732 -35930919 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 5 1037 644 222 106 30 chr17 59341732 59341747 -35930904 + Lx7 LINE L1 7674 7690 -6 4 1037 186 43 0 0 chr17 59342152 59342175 -35930476 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1037 314 328 30 35 chr17 59342295 59342494 -35930157 + L1M5 LINE L1 4486 4683 -1463 5 1037 562 172 22 51 chr17 59343172 59343350 -35929301 - Lx9 LINE L1 -2 7642 7470 5 1037 697 300 5 5 chr17 59343597 59343798 -35928853 + Lx9 LINE L1 7113 7313 -331 5 1037 498 114 0 0 chr17 59343873 59343952 -35928699 + (CA)n Simple_repeat Simple_repeat 2 80 0 5 1037 872 222 285 0 chr17 59345185 59345473 -35927178 + ORR1D2 LTR MaLR 1 370 0 5 1037 1048 243 104 48 chr17 59345998 59346352 -35926299 + ORR1D1 LTR MaLR 1 374 0 5 1037 2159 158 46 15 chr17 59348785 59349196 -35923455 - Lx2 LINE L1 -2 6995 6572 5 1037 248 283 158 32 chr17 59349207 59349302 -35923349 + MurSatRep1 Unknown Unknown 156 262 -1875 5 1037 1750 90 16 4 chr17 59349826 59350083 -35922568 - L1_Mus3 LINE L1 -14 6624 6365 5 1037 402 57 0 0 chr17 59350083 59350136 -35922515 + L1_Mus3 LINE L1 6048 6100 -538 5 1037 381 311 9 0 chr17 59350261 59350367 -35922284 - PB1D10 SINE Alu -8 109 3 5 1037 252 0 0 0 chr17 59350807 59350835 -35921816 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 5 1037 1059 57 70 6 chr17 59351017 59351175 -35921476 - L1Md_F2 LINE L1 -4 6578 6411 5 1037 466 348 47 25 chr17 59351615 59351889 -35920762 + B4A SINE B4 1 280 -12 5 1037 593 321 42 16 chr17 59352039 59352229 -35920422 + B3A SINE B2 4 198 0 5 1037 366 344 34 12 chr17 59353085 59353311 -35919340 - MER47B DNA MER2_type -14 404 113 5 1037 2114 256 78 19 chr17 59353741 59354471 -35918180 + Lx9 LINE L1 6869 7641 -3 5 1037 21733 22 0 0 chr17 59354835 59358056 -35914595 - L1Md_T LINE L1 0 6582 3362 5 1037 225 94 0 0 chr17 59358503 59358535 -35914116 + (TTCC)n Simple_repeat Simple_repeat 1 32 0 5 1037 697 179 20 0 chr17 59358542 59358693 -35913958 + CT-rich Low_complexity Low_complexity 1 154 0 5 1037 622 262 0 14 chr17 59358693 59358840 -35913811 - B1_Mus2 SINE Alu 0 147 3 5 1037 3283 68 9 0 chr17 59358968 59359394 -35913257 - L1_Mus1 LINE L1 0 6567 6138 5 1037 3747 67 12 0 chr17 59359396 59359875 -35912776 + L1_Mus1 LINE L1 5625 6109 -458 5 1037 21 36 0 0 chr17 59361651 59361679 -35910972 + AT_rich Low_complexity Low_complexity 1 28 0 5 1037 285 309 47 4 chr17 59361849 59361986 -35910665 - L1_Mm LINE L1 -2080 5802 5625 5 1037 233 106 14 70 chr17 59362322 59362393 -35910258 + (CCAA)n Simple_repeat Simple_repeat 1 67 0 5 1037 372 312 101 0 chr17 59362548 59362657 -35909994 - ID_B1 SINE B4 -19 205 86 5 1037 2276 99 3 15 chr17 59363408 59363745 -35908906 + L1_Mus4 LINE L1 6297 6629 -7 5 1037 1357 209 279 30 chr17 59363749 59364142 -35908509 - RMER1B Other Other -5 1061 571 5 1037 633 283 20 69 chr17 59364123 59364370 -35908281 - RMER1A Other Other -592 438 204 5 1037 243 319 14 0 chr17 59364454 59364523 -35908128 - RMER1A Other Other -684 346 277 5 1037 997 230 194 27 chr17 59364519 59364818 -35907833 - RMER1B Other Other -675 391 43 5 1037 180 0 0 0 chr17 59365480 59365500 -35907151 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1037 1259 236 138 58 chr17 59365504 59365619 -35907032 + RMER1C Other Other 841 983 -359 5 1037 302 45 23 0 chr17 59365619 59365663 -35906988 + (CAA)n Simple_repeat Simple_repeat 2 46 0 5 1037 1259 236 138 58 chr17 59365663 59366010 -35906641 + RMER1C Other Other 984 1340 -2 5 1037 347 296 63 17 chr17 59366096 59366271 -35906380 + L1MD LINE L1 2595 2777 -3369 5 1037 475 313 26 26 chr17 59366478 59366744 -35905907 + L1MD LINE L1 2847 3112 -3034 5 1037 278 237 203 15 chr17 59366764 59366897 -35905754 + L1MD LINE L1 3740 3897 -2249 5 1037 247 294 59 93 chr17 59367093 59367416 -35905235 + L1MD LINE L1 4140 4451 -1695 5 1037 1250 138 5 0 chr17 59367434 59367623 -35905028 + Lx LINE L1 5982 6171 -483 5 1037 365 256 136 22 chr17 59367675 59367859 -35904792 + L1MD LINE L1 4462 4666 -1480 5 1037 274 338 49 35 chr17 59367901 59368045 -35904606 - B3 SINE B2 -30 186 41 5 1037 488 155 0 19 chr17 59368093 59368198 -35904453 + GA-rich Low_complexity Low_complexity 3 105 0 5 1037 337 274 29 15 chr17 59368395 59368532 -35904119 + L1MD LINE L1 4897 5035 -1111 5 1037 354 333 33 62 chr17 59368654 59368721 -35903930 + L1MD LINE L1 5020 5089 -1057 5 1037 4045 136 32 86 chr17 59368721 59369500 -35903151 - RMER19A LTR ERVK 0 737 1 5 1037 354 333 33 62 chr17 59369500 59369643 -35903008 + L1MD LINE L1 5090 5223 -923 5 1037 954 288 68 63 chr17 59369779 59369990 -35902661 + L1M2 LINE L1 3745 3958 -2185 5 1037 928 201 23 50 chr17 59369990 59370210 -35902441 + B3 SINE B2 1 214 -2 5 1037 954 288 68 63 chr17 59370210 59370632 -35902019 + L1M2 LINE L1 3959 4381 -1762 5 1037 480 254 58 0 chr17 59370647 59370785 -35901866 + B1_Mm SINE Alu 1 146 -1 5 1037 306 232 114 19 chr17 59371113 59371324 -35901327 + L1M2 LINE L1 5423 5655 -645 5 1037 512 244 21 133 chr17 59371340 59371581 -35901070 - Lx8 LINE L1 -23 7450 7237 5 1037 378 0 0 0 chr17 59371581 59371623 -35901028 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1037 1450 361 73 20 chr17 59371852 59372728 -35899923 - Lx8 LINE L1 -203 7270 6349 5 1037 2363 113 0 3 chr17 59372884 59373222 -35899429 + Lx3C LINE L1 6184 6520 -456 5 1037 8299 42 1 0 chr17 59373234 59374272 -35898379 - L1Md_F2 LINE L1 0 6582 5544 5 1037 254 302 111 19 chr17 59374294 59374471 -35898180 - MIR SINE MIR -51 217 23 5 1037 693 200 75 0 chr17 59374475 59374635 -35898016 + Lx3C LINE L1 6802 6973 -3 5 1037 387 0 0 0 chr17 59375372 59375415 -35897236 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 129 262 333 35 35 chr17 59375554 59375697 -35896954 - MLT2D LTR ERVL -198 216 74 5 1038 408 200 0 0 chr17 59375697 59375787 -35896864 + (CA)n Simple_repeat Simple_repeat 1 90 0 5 1038 313 359 38 15 chr17 59376414 59376547 -35896104 + MIRb SINE MIR 56 191 -77 5 1038 23 78 0 0 chr17 59376610 59376661 -35895990 + AT_rich Low_complexity Low_complexity 1 51 0 5 1038 279 0 0 0 chr17 59377060 59377091 -35895560 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 5 1038 181 355 85 11 chr17 59377804 59377898 -35894753 - MIR3 SINE MIR -6 202 102 5 1038 548 308 182 78 chr17 59378161 59378534 -35894117 - MER67D LTR ERV1 -36 478 67 5 1038 205 299 126 24 chr17 59379244 59379410 -35893241 - MIR SINE MIR -15 247 62 5 1038 208 164 18 35 chr17 59381142 59381199 -35891452 + T-rich Low_complexity Low_complexity 2 57 0 5 1038 747 249 5 52 chr17 59382253 59382444 -35890207 + B3 SINE B2 35 216 0 5 1038 234 0 0 0 chr17 59382910 59382936 -35889715 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1038 399 41 0 0 chr17 59384122 59384171 -35888480 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1038 584 14 14 0 chr17 59384183 59384256 -35888395 + (GA)n Simple_repeat Simple_repeat 1 74 0 5 1038 2487 113 5 5 chr17 59386200 59386574 -35886077 + Lx LINE L1 6281 6654 0 5 1038 404 326 108 0 chr17 59387473 59387602 -35885049 + B1F SINE Alu 7 149 0 5 1038 257 250 0 0 chr17 59390446 59390498 -35882153 - MTE2b LTR MaLR -327 52 1 5 1038 430 263 53 79 chr17 59390516 59390706 -35881945 - ORR1D1 LTR MaLR -50 324 140 5 1038 497 190 190 0 chr17 59390697 59390818 -35881833 + ORR1D1 LTR MaLR 6 149 -225 5 1038 206 298 0 0 chr17 59391232 59391289 -35881362 + CT-rich Low_complexity Low_complexity 4 60 0 5 1038 234 91 0 0 chr17 59391553 59391586 -35881065 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 5 1038 22 0 0 0 chr17 59392213 59392235 -35880416 + AT_rich Low_complexity Low_complexity 1 22 0 5 1038 22 0 0 0 chr17 59392460 59392482 -35880169 + AT_rich Low_complexity Low_complexity 1 22 0 5 1038 184 341 144 0 chr17 59392500 59392632 -35880019 + L2a LINE L2 3266 3416 -10 5 1038 786 232 50 0 chr17 59392854 59393035 -35879616 + ORR1D1 LTR MaLR 183 372 -2 5 1038 1803 195 52 43 chr17 59393555 59393999 -35878652 - Lx3C LINE L1 -11 6965 6518 5 1038 544 128 73 0 chr17 59393987 59394096 -35878555 + Lx3C LINE L1 5865 5981 -995 5 1038 3554 62 0 0 chr17 59394096 59394546 -35878105 + L1Md_F2 LINE L1 6125 6574 -8 5 1038 2486 220 11 8 chr17 59394709 59395244 -35877407 + Lx3C LINE L1 6006 6542 -434 5 1038 339 271 164 41 chr17 59395244 59395424 -35877227 - MIR SINE MIR -54 214 8 5 1038 411 315 22 73 chr17 59395825 59395962 -35876689 + B1F SINE Alu 3 132 -17 5 1038 2532 128 9 27 chr17 59395962 59396410 -35876241 + Lx3B LINE L1 6534 6973 0 5 1038 495 69 0 0 chr17 59396423 59396495 -35876156 + (CATA)n Simple_repeat Simple_repeat 2 73 0 5 1038 854 309 83 67 chr17 59397618 59399090 -35873561 - L1MA4A LINE L1 -399 5904 4396 5 1038 411 324 44 26 chr17 59399206 59399545 -35873106 - L1MA4A LINE L1 -1750 4390 4046 5 1038 738 286 22 79 chr17 59399545 59399773 -35872878 + B3 SINE B2 2 216 0 5 1038 276 318 54 32 chr17 59399892 59400077 -35872574 - L1_Rod LINE L1 -1886 3961 3773 5 1038 474 18 0 0 chr17 59400165 59400220 -35872431 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1038 408 88 0 0 chr17 59401186 59401243 -35871408 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 1038 2174 242 47 26 chr17 59402235 59402850 -35869801 - Lx9 LINE L1 -620 7024 6397 5 1038 1868 229 58 18 chr17 59402998 59403501 -35869150 + Lx9 LINE L1 7031 7553 -91 5 1038 751 124 0 21 chr17 59403881 59403986 -35868665 + (TTCC)n Simple_repeat Simple_repeat 3 106 0 5 1038 3106 54 16 0 chr17 59403986 59404374 -35868277 + MTA_Mm LTR MaLR 3 396 0 5 1038 751 124 0 21 chr17 59404374 59404395 -35868256 + (TTCC)n Simple_repeat Simple_repeat 3 22 0 5 1038 1095 129 0 0 chr17 59404395 59404573 -35868078 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 5 1038 751 124 0 21 chr17 59404573 59404585 -35868066 + (TTCC)n Simple_repeat Simple_repeat 3 14 0 5 1038 576 219 7 79 chr17 59404589 59404728 -35867923 - B1_Mur4 SINE Alu -21 129 1 5 1038 25 0 0 0 chr17 59405287 59405312 -35867339 + AT_rich Low_complexity Low_complexity 1 25 0 5 1038 1319 92 0 5 chr17 59406170 59406355 -35866296 - B2_Mm2 SINE B2 -10 185 2 5 1038 198 71 0 0 chr17 59406469 59406497 -35866154 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 5 1038 429 366 112 31 chr17 59406924 59407245 -35865406 - LTR41 LTR ERVL -179 589 243 5 1038 21 71 0 0 chr17 59407531 59407573 -35865078 + AT_rich Low_complexity Low_complexity 1 42 0 5 1038 25 0 0 0 chr17 59407804 59407829 -35864822 + AT_rich Low_complexity Low_complexity 1 25 0 5 1038 310 316 69 26 chr17 59408330 59408464 -35864187 + MTEa LTR MaLR 238 369 -10 6 1038 547 182 11 110 chr17 59408472 59408567 -35864084 + Lx9 LINE L1 7451 7528 -116 6 1038 514 117 11 0 chr17 59408567 59408661 -35863990 + Lx2 LINE L1 6903 6997 0 6 1038 547 182 11 110 chr17 59408661 59408756 -35863895 + Lx9 LINE L1 7529 7622 -22 6 1038 207 0 0 0 chr17 59408766 59408789 -35863862 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 6 1038 267 31 0 0 chr17 59409060 59409092 -35863559 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 1038 300 53 0 0 chr17 59409412 59409450 -35863201 + (T)n Simple_repeat Simple_repeat 1 38 0 6 1038 212 59 29 0 chr17 59409463 59409497 -35863154 + (GA)n Simple_repeat Simple_repeat 2 36 0 6 1038 234 245 0 0 chr17 59410424 59410473 -35862178 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1038 346 330 25 0 chr17 59411654 59411772 -35860879 + ID_B1 SINE B4 98 218 -6 6 1038 1051 150 0 32 chr17 59412153 59412339 -35860312 - B2_Mm2 SINE B2 -6 189 10 6 1038 13667 167 35 10 chr17 59412439 59415728 -35856923 - Lx4B LINE L1 0 7058 3262 6 1038 1559 204 124 2 chr17 59415721 59416319 -35856332 - Lx4B LINE L1 -4293 1584 893 6 1038 471 344 153 17 chr17 59416796 59417207 -35855444 - MT2A LTR ERVL -5 528 62 6 1038 227 323 120 78 chr17 59417009 59417251 -35855400 - MTEb LTR MaLR -122 257 6 6 1038 1508 139 151 43 chr17 59417627 59417951 -35854700 + RMER6C LTR ERVK 1 359 -331 6 1038 1229 194 147 0 chr17 59417957 59418256 -35854395 + Lx3C LINE L1 6632 6974 -2 6 1038 198 0 0 0 chr17 59419624 59419646 -35853005 + (A)n Simple_repeat Simple_repeat 1 22 0 6 1038 331 282 94 0 chr17 59419896 59420013 -35852638 - RSINE1 SINE B4 -15 150 23 6 1038 339 25 0 0 chr17 59420155 59420195 -35852456 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 6 1038 285 29 0 0 chr17 59420645 59420679 -35851972 + (TCTG)n Simple_repeat Simple_repeat 3 36 0 6 1038 217 170 0 21 chr17 59421462 59421510 -35851141 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 6 1038 605 124 19 0 chr17 59421555 59421660 -35850991 + (TTTC)n Simple_repeat Simple_repeat 3 109 0 6 1038 233 308 50 19 chr17 59421759 59421918 -35850733 + Lx7 LINE L1 7487 7650 -46 6 1038 280 284 40 0 chr17 59422226 59422300 -35850351 - Lx8 LINE L1 -810 6663 6587 6 1038 326 162 0 101 chr17 59422455 59422544 -35850107 + Lx7 LINE L1 7282 7361 -335 6 1038 24 32 0 0 chr17 59422703 59422734 -35849917 + AT_rich Low_complexity Low_complexity 1 31 0 6 1038 198 0 0 0 chr17 59423631 59423653 -35848998 + (TG)n Simple_repeat Simple_repeat 1 22 0 6 1038 209 139 23 0 chr17 59426840 59426883 -35845768 + CT-rich Low_complexity Low_complexity 2 45 0 6 1038 22 0 0 0 chr17 59426916 59426938 -35845713 + AT_rich Low_complexity Low_complexity 1 22 0 6 1038 200 100 25 0 chr17 59427134 59427174 -35845477 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 6 1038 252 370 64 41 chr17 59427801 59428180 -35844471 + L2b LINE L2 2832 3212 -214 6 1038 234 257 93 28 chr17 59428183 59428291 -35844360 + ORR1E LTR MaLR 7 121 -238 6 1038 23 68 0 0 chr17 59428785 59428829 -35843822 + AT_rich Low_complexity Low_complexity 1 44 0 6 1038 13902 29 0 0 chr17 59428829 59431175 -35841476 - L1Md_T LINE L1 0 6582 4236 6 1038 23453 24 0 0 chr17 59431174 59433949 -35838702 + L1Md_T LINE L1 2813 5586 -297 6 1038 8971 6 0 0 chr17 59433949 59434945 -35837706 + L1Md_T LINE L1 5587 6582 0 6 1038 253 274 16 110 chr17 59438788 59438915 -35833736 + LTR81A LTR ERV1? 128 242 -1108 6 1038 359 344 187 28 chr17 59438916 59439242 -35833409 + MamGypLTR2c LTR Gypsy 4 381 -687 6 1038 1077 82 0 13 chr17 59439451 59439600 -35833051 - B1_Mus1 SINE Alu 0 148 2 6 1038 242 316 121 12 chr17 59440155 59440328 -35832323 + L2b LINE L2 2888 3079 -340 6 1038 215 319 109 11 chr17 59443536 59443628 -35829023 - MIRc SINE MIR -134 134 34 6 1038 284 356 10 0 chr17 59443801 59443905 -35828746 - MER70B LTR ERVL -177 401 297 6 1038 330 376 47 7 chr17 59443924 59444074 -35828577 - MER70B LTR ERVL -359 219 64 6 1038 5616 207 52 16 chr17 59444137 59445363 -35827288 + Lx5 LINE L1 5780 7050 0 6 1038 248 270 40 26 chr17 59446308 59446384 -35826267 - MIRc SINE MIR -115 153 77 6 1038 502 170 35 75 chr17 59446561 59446745 -35825906 - ORR1B1 LTR MaLR -175 171 1 6 1038 3411 134 30 134 chr17 59446745 59447477 -35825174 - ORR1B1-int LTR MaLR 0 1963 1308 6 1038 377 154 15 0 chr17 59447507 59447572 -35825079 - ORR1B1-int LTR MaLR -1666 297 232 6 1038 441 130 32 8 chr17 59447743 59447867 -35824784 + (TCTG)n Simple_repeat Simple_repeat 2 128 0 6 1038 23 33 0 0 chr17 59448346 59448376 -35824275 + AT_rich Low_complexity Low_complexity 1 30 0 6 1038 186 43 0 0 chr17 59448382 59448405 -35824246 + (TG)n Simple_repeat Simple_repeat 1 23 0 6 1038 364 324 27 54 chr17 59448407 59448554 -35824097 - RSINE1 SINE B4 -20 145 3 6 1038 354 305 78 37 chr17 59449175 59449393 -35823258 + Charlie1b DNA MER1_type 89 315 -208 6 1038 2425 105 65 8 chr17 59449424 59449807 -35822844 + Lx3_Mus LINE L1 6597 7001 -8 6 1038 2809 201 47 84 chr17 59449841 59450181 -35822470 - L1_Mur2 LINE L1 -3426 2451 2089 6 1038 2306 111 25 8 chr17 59450181 59450544 -35822107 - Lx LINE L1 -4 6650 6282 6 1038 2809 201 47 84 chr17 59450544 59450629 -35822022 - L1_Mur2 LINE L1 -3789 2088 2061 6 1038 405 0 0 0 chr17 59450629 59450674 -35821977 + (TAG)n Simple_repeat Simple_repeat 3 47 0 6 1038 2809 201 47 84 chr17 59450674 59451060 -35821591 - L1_Mur2 LINE L1 -3817 2060 1669 6 1038 393 22 0 0 chr17 59451076 59451122 -35821529 + (TTTC)n Simple_repeat Simple_repeat 1 46 0 6 1038 331 189 156 28 chr17 59451293 59451402 -35821249 - Lx4B LINE L1 -1 7057 6935 6 1038 235 216 0 73 chr17 59451408 59451463 -35821188 + RSINE1 SINE B4 115 165 0 6 1038 331 165 24 0 chr17 59451473 59451558 -35821093 + (CA)n Simple_repeat Simple_repeat 1 87 0 6 1038 495 325 23 23 chr17 59451755 59451969 -35820682 + B3 SINE B2 3 216 0 6 1038 369 0 0 0 chr17 59452022 59452063 -35820588 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 1038 675 0 0 0 chr17 59454033 59454108 -35818543 + (TTTTC)n Simple_repeat Simple_repeat 2 76 0 6 1038 222 193 0 0 chr17 59454770 59454827 -35817824 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 1038 657 338 30 34 chr17 59454853 59455122 -35817529 - B4A SINE B4 -24 268 1 6 1038 1095 205 127 46 chr17 59455529 59455836 -35816815 - IAPEY3_LTR LTR ERVK 0 332 1 6 1038 2358 299 101 19 chr17 59455967 59456961 -35815690 + Lx8 LINE L1 6222 7296 -177 6 1038 315 0 0 0 chr17 59456982 59457017 -35815634 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1038 335 151 0 27 chr17 59457057 59457132 -35815519 + GA-rich Low_complexity Low_complexity 3 75 0 6 1038 243 250 0 0 chr17 59457883 59457951 -35814700 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 6 1038 27 81 0 0 chr17 59457987 59458049 -35814602 + AT_rich Low_complexity Low_complexity 1 62 0 6 1038 375 252 0 0 chr17 59458378 59458489 -35814162 + (TA)n Simple_repeat Simple_repeat 2 112 0 6 1038 34579 69 4 8 chr17 59458924 59464317 -35808334 + L1Md_A LINE L1 238 5616 -563 6 1038 8023 37 8 0 chr17 59464317 59465292 -35807359 + L1Md_F3 LINE L1 5588 6570 -14 6 1038 1026 262 43 31 chr17 59465292 59465350 -35807301 + L1Md_A LINE L1 5617 5679 -500 6 1038 755 283 36 36 chr17 59465385 59465634 -35807017 - Lx8 LINE L1 -108 7365 7117 6 1038 1035 106 0 0 chr17 59468179 59468320 -35804331 + B1_Mus1 SINE Alu 6 146 -2 6 1038 896 323 69 28 chr17 59468328 59468936 -35803715 - Lx8 LINE L1 -188 7285 6653 6 1038 363 44 0 0 chr17 59469073 59469118 -35803533 + (TAA)n Simple_repeat Simple_repeat 3 47 0 6 1038 1831 268 95 8 chr17 59469124 59469610 -35803041 - Lx9 LINE L1 -809 6835 6308 6 1038 335 272 0 0 chr17 59469745 59469826 -35802825 + Lx9 LINE L1 6828 6908 -736 6 1038 1180 283 28 0 chr17 59470667 59471031 -35801620 - ORR1D1 LTR MaLR 0 374 1 6 1038 28 0 0 0 chr17 59471799 59471827 -35800824 + AT_rich Low_complexity Low_complexity 1 28 0 6 1038 21 0 0 0 chr17 59473634 59473655 -35798996 + AT_rich Low_complexity Low_complexity 1 21 0 6 1038 1206 286 34 74 chr17 59473880 59474458 -35798193 - MLT2B4 LTR ERVL -1 559 6 6 1038 658 303 40 35 chr17 59474928 59475130 -35797521 - B3 SINE B2 -13 203 1 6 1038 639 141 6 1 chr17 59475770 59475885 -35796766 - B1_Mus1 SINE Alu -2 118 1 6 1038 355 205 188 83 chr17 59475771 59475904 -35796747 - B4 SINE B4 -69 223 77 6 1038 298 288 45 141 chr17 59475777 59475975 -35796676 - MT2B2 LTR ERVL -326 258 80 6 1038 195 114 0 0 chr17 59476191 59476226 -35796425 + (TTTTTA)n Simple_repeat Simple_repeat 2 36 0 6 1038 23 0 0 0 chr17 59477722 59477745 -35794906 + AT_rich Low_complexity Low_complexity 1 23 0 6 1038 221 239 0 0 chr17 59478094 59478160 -35794491 + (TG)n Simple_repeat Simple_repeat 1 66 0 6 1038 207 0 0 0 chr17 59479119 59479142 -35793509 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1038 607 364 55 7 chr17 59479162 59479433 -35793218 + B4 SINE B4 9 292 0 6 1038 330 87 0 0 chr17 59479952 59479998 -35792653 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1038 23 0 0 0 chr17 59480775 59480798 -35791853 + AT_rich Low_complexity Low_complexity 1 23 0 6 1038 204 125 0 0 chr17 59481670 59481702 -35790949 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 1038 261 119 0 0 chr17 59481795 59481837 -35790814 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1038 24 32 0 0 chr17 59481841 59481872 -35790779 + AT_rich Low_complexity Low_complexity 1 31 0 6 1038 26 64 0 0 chr17 59481889 59481936 -35790715 + AT_rich Low_complexity Low_complexity 1 47 0 6 1038 623 289 12 6 chr17 59482218 59482378 -35790273 + B3A SINE B2 3 163 -35 6 1038 978 104 0 7 chr17 59482535 59482680 -35789971 - B1_Mus1 SINE Alu -1 147 4 6 1038 244 333 35 0 chr17 59482975 59483062 -35789589 - RSINE1 SINE B4 -71 94 5 6 1038 219 237 13 0 chr17 59483074 59483150 -35789501 + T-rich Low_complexity Low_complexity 2 78 0 6 1038 294 29 0 0 chr17 59484716 59484751 -35787900 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 6 1038 5501 120 7 1 chr17 59485430 59486272 -35786379 + Lx2A LINE L1 6162 7008 0 7 1038 288 53 0 0 chr17 59486379 59486417 -35786234 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1038 295 253 101 0 chr17 59486637 59486716 -35785935 - 5S rRNA rRNA -34 87 1 7 1038 22 70 0 0 chr17 59487129 59487172 -35785479 + AT_rich Low_complexity Low_complexity 1 43 0 7 1038 180 77 0 0 chr17 59487517 59487543 -35785108 + (T)n Simple_repeat Simple_repeat 1 26 0 7 1038 1142 41 7 20 chr17 59487547 59487697 -35784954 - B1_Mus1 SINE Alu 0 148 1 7 1038 1016 218 115 3 chr17 59487908 59488221 -35784430 - Lx9 LINE L1 -4 7640 7293 7 1038 1861 186 119 7 chr17 59488218 59488630 -35784021 + Lx9 LINE L1 6828 7285 -359 7 1038 30 45 0 0 chr17 59488697 59488741 -35783910 + AT_rich Low_complexity Low_complexity 1 44 0 7 1038 334 302 76 23 chr17 59491132 59491264 -35781387 - Lx9 LINE L1 -249 7395 7257 7 1038 277 210 65 49 chr17 59491352 59491537 -35781114 + Lx9 LINE L1 7455 7642 -2 7 1038 994 99 43 0 chr17 59491675 59491816 -35780835 + B1_Mus1 SINE Alu 2 148 0 7 1038 219 167 0 0 chr17 59491838 59491880 -35780771 + A-rich Low_complexity Low_complexity 4 45 0 7 1038 306 0 0 0 chr17 59493400 59493434 -35779217 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 7 1038 1062 112 0 6 chr17 59493435 59493596 -35779055 - B2_Mm2 SINE B2 -34 161 2 7 1038 1097 275 46 16 chr17 59493893 59494240 -35778411 + ORR1E LTR MaLR 2 370 0 7 1038 443 48 16 0 chr17 59494985 59495047 -35777604 + (TTCTG)n Simple_repeat Simple_repeat 4 66 0 7 1038 795 21 0 0 chr17 59495048 59495141 -35777510 + (CCTAT)n Simple_repeat Simple_repeat 3 95 0 7 1038 222 69 0 0 chr17 59495148 59495195 -35777456 + (TTCTC)n Simple_repeat Simple_repeat 1 47 0 7 1038 954 136 17 6 chr17 59495195 59495373 -35777278 + CT-rich Low_complexity Low_complexity 1 180 0 7 1038 1296 79 0 0 chr17 59495373 59495551 -35777100 + (TCCCC)n Simple_repeat Simple_repeat 3 180 0 7 1038 23 54 0 0 chr17 59496227 59496264 -35776387 + AT_rich Low_complexity Low_complexity 1 37 0 7 1038 528 45 0 0 chr17 59497517 59497584 -35775067 + (CA)n Simple_repeat Simple_repeat 2 68 0 7 1038 198 344 0 0 chr17 59498706 59498767 -35773884 + MIR SINE MIR 80 140 -122 7 1038 235 200 82 41 chr17 59498908 59498981 -35773670 + L3b LINE CR1 227 302 -180 7 1038 457 292 65 75 chr17 59499160 59499467 -35773184 - RLTR15 LTR ERVK -8 351 48 7 1038 25 0 0 0 chr17 59500408 59500433 -35772218 + AT_rich Low_complexity Low_complexity 1 25 0 1 1038 1303 248 33 3 chr17 59500607 59500910 -35771741 + MER57C2 LTR ERV1 77 388 -46 2 1038 408 88 0 0 chr17 59500920 59500977 -35771674 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 1038 564 265 50 22 chr17 59502648 59502787 -35769864 - ID_B1 SINE B4 0 224 82 4 129 720 108 0 0 chr17 59506576 59506706 -35765945 + (TC)n Simple_repeat Simple_repeat 2 131 0 5 1039 388 271 50 17 chr17 59508007 59508145 -35764506 - L1ME3 LINE L1 -45 6117 5983 6 1039 701 205 115 0 chr17 59508674 59508830 -35763821 + RMER21A LTR ERV1 770 943 -4 7 1039 189 0 0 0 chr17 59508866 59508887 -35763764 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 1039 411 56 0 0 chr17 59508887 59508941 -35763710 + (GA)n Simple_repeat Simple_repeat 1 54 0 9 1039 1083 283 30 32 chr17 59509641 59510039 -35762612 + RMER20A LTR ERVK 55 516 0 1 1039 198 275 0 0 chr17 59512320 59512389 -35760262 + (CATATA)n Simple_repeat Simple_repeat 2 70 0 1 1039 481 218 0 16 chr17 59512376 59512558 -35760093 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 1039 423 0 0 0 chr17 59512794 59512841 -35759810 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 1039 722 11 11 0 chr17 59512841 59512927 -35759724 + (GA)n Simple_repeat Simple_repeat 1 88 0 1 1039 21 0 0 0 chr17 59513998 59514019 -35758632 + AT_rich Low_complexity Low_complexity 1 21 0 1 1039 207 69 0 0 chr17 59514711 59514740 -35757911 + (TTTTG)n Simple_repeat Simple_repeat 5 33 0 1 1039 252 0 0 0 chr17 59515088 59515116 -35757535 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1039 217 363 72 38 chr17 59515158 59515393 -35757258 - MIR SINE MIR -2 260 18 1 1039 367 235 88 100 chr17 59515493 59515553 -35757098 + L1MC5 LINE L1 7324 7384 -577 1 1039 426 85 0 0 chr17 59515553 59515612 -35757039 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 1039 367 235 88 100 chr17 59515612 59515802 -35756849 + L1MC5 LINE L1 7385 7571 -390 1 1039 21 57 0 0 chr17 59516346 59516381 -35756270 + AT_rich Low_complexity Low_complexity 1 35 0 2 1039 25 0 0 0 chr17 59517420 59517445 -35755206 + AT_rich Low_complexity Low_complexity 1 25 0 2 1039 239 0 0 31 chr17 59517474 59517506 -35755145 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1039 395 253 297 5 chr17 59518185 59518407 -35754244 - B4A SINE B4 -3 289 3 2 1039 43 64 0 0 chr17 59519884 59519962 -35752689 + AT_rich Low_complexity Low_complexity 1 78 0 2 1039 204 40 0 0 chr17 59520444 59520469 -35752182 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1039 2203 130 19 25 chr17 59520509 59520871 -35751780 - Lx LINE L1 -12 6642 6283 2 1039 230 315 0 27 chr17 59523405 59523480 -35749171 - ID4_ SINE ID -4 79 7 2 1039 204 306 173 40 chr17 59523674 59523824 -35748827 - MIRb SINE MIR -58 210 41 2 1039 297 358 68 6 chr17 59524634 59524797 -35747854 - MLT1I LTR MaLR -11 400 228 3 1039 212 264 53 32 chr17 59525176 59525270 -35747381 + PB1D10 SINE Alu 2 97 -20 3 1039 2509 120 0 69 chr17 59526224 59526672 -35745979 - Lx3B LINE L1 -4 6969 6553 3 1039 6711 29 1 0 chr17 59526669 59527457 -35745194 - L1Md_A LINE L1 0 6582 5794 3 1039 180 0 0 0 chr17 59527458 59527478 -35745173 + (TTAGGG)n Simple_repeat Simple_repeat 3 22 0 3 1039 4591 119 73 8 chr17 59527481 59528274 -35744377 - Lx3B LINE L1 -418 6555 5687 3 1039 968 203 62 12 chr17 59528374 59528633 -35744018 - Lx9 LINE L1 -40 7604 7333 3 1039 622 323 73 111 chr17 59528683 59529285 -35743366 - RLTR18 LTR ERVK -5 611 33 3 1039 247 301 17 42 chr17 59529383 59529501 -35743150 - Lx8 LINE L1 -6 7467 7353 3 1039 210 141 30 45 chr17 59529506 59529573 -35743078 + (TTTG)n Simple_repeat Simple_repeat 3 68 0 3 1039 237 369 0 0 chr17 59529577 59529642 -35743009 - Lx8 LINE L1 -144 7329 7265 3 1039 1334 148 37 5 chr17 59529644 59529862 -35742789 - ORR1B2 LTR MaLR 0 367 143 3 1039 254 288 78 85 chr17 59529887 59530016 -35742635 - RLTR18 LTR ERVK -335 281 154 4 1039 640 215 23 9 chr17 59530030 59530177 -35742474 - ORR1B2 LTR MaLR -217 167 1 3 1039 693 327 39 45 chr17 59530177 59530513 -35742138 - Lx8 LINE L1 -206 7267 6934 3 1039 1598 338 130 19 chr17 59530723 59531348 -35741303 - Lx8 LINE L1 -576 6897 6192 3 1039 507 45 0 0 chr17 59531348 59531414 -35741237 + (CA)n Simple_repeat Simple_repeat 1 66 0 4 1039 1598 338 130 19 chr17 59531414 59531820 -35740831 - Lx8 LINE L1 -1282 6191 5747 3 1039 291 93 0 0 chr17 59531820 59531863 -35740788 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 1039 1598 285 61 11 chr17 59531863 59531994 -35740657 - Lx8 LINE L1 -1727 5746 5570 3 1039 1776 103 0 8 chr17 59532113 59532367 -35740284 + L1Md_F2 LINE L1 6319 6570 -12 4 1039 808 59 8 17 chr17 59533424 59533544 -35739107 + (TCTA)n Simple_repeat Simple_repeat 4 122 0 4 1039 340 226 106 11 chr17 59533681 59533692 -35738959 + PB1 SINE Alu 1 11 -116 4 1039 7383 12 2 0 chr17 59533692 59534512 -35738139 - RLTR13B2 LTR ERVK 0 822 1 4 1039 866 132 0 14 chr17 59534512 59534650 -35738001 + B1_Mus1 SINE Alu 13 148 0 4 1039 1074 144 0 0 chr17 59534665 59534845 -35737806 + (GAA)n Simple_repeat Simple_repeat 1 180 0 4 1039 754 173 0 18 chr17 59534845 59534858 -35737793 + polypurine Low_complexity Low_complexity 1 13 0 4 1039 1212 106 0 0 chr17 59534858 59535037 -35737614 + (GAA)n Simple_repeat Simple_repeat 1 179 0 5 1039 754 173 0 18 chr17 59535037 59535071 -35737580 + polypurine Low_complexity Low_complexity 14 46 0 5 1039 1116 133 0 0 chr17 59535071 59535251 -35737400 + (GAA)n Simple_repeat Simple_repeat 1 180 0 5 1039 754 173 0 18 chr17 59535251 59535373 -35737278 + polypurine Low_complexity Low_complexity 47 167 0 5 1039 22 0 0 0 chr17 59535501 59535523 -35737128 + AT_rich Low_complexity Low_complexity 1 22 0 5 1039 570 318 98 6 chr17 59535612 59535884 -35736767 - Lx8 LINE L1 -242 7231 6968 5 1039 3949 170 29 10 chr17 59536248 59536971 -35735680 + RMER19A LTR ERVK 1 737 0 5 1039 352 269 28 28 chr17 59537116 59537223 -35735428 - Charlie1a DNA MER1_type -274 1181 1075 5 1039 286 329 19 31 chr17 59537239 59537399 -35735252 - Charlie1a DNA MER1_type -500 955 798 5 1039 238 384 0 29 chr17 59537732 59537869 -35734782 - MIR SINE MIR -83 179 47 5 1039 198 345 90 37 chr17 59537953 59538197 -35734454 + L2 LINE L2 2112 2368 -1051 5 1039 858 113 112 8 chr17 59538589 59538723 -35733928 - B1_Mus1 SINE Alu 0 148 1 6 1039 773 272 30 102 chr17 59538828 59539160 -35733491 + RMER15 LTR ERVL 1 308 -267 6 1039 22 35 0 0 chr17 59539362 59539391 -35733260 + AT_rich Low_complexity Low_complexity 1 29 0 6 1039 22 0 0 0 chr17 59539520 59539542 -35733109 + AT_rich Low_complexity Low_complexity 1 22 0 6 1039 35 83 0 0 chr17 59540839 59540923 -35731728 + AT_rich Low_complexity Low_complexity 1 84 0 6 1039 185 94 0 30 chr17 59541318 59541351 -35731300 + (GGAAA)n Simple_repeat Simple_repeat 2 33 0 6 1039 253 281 0 0 chr17 59541361 59541418 -35731233 + GA-rich Low_complexity Low_complexity 3 59 0 6 1039 264 280 80 0 chr17 59542018 59542093 -35730558 - L2a LINE L2 -6 3420 3340 6 1039 234 0 0 0 chr17 59542718 59542744 -35729907 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1039 357 299 88 19 chr17 59543199 59543359 -35729292 + Lx8 LINE L1 6583 6753 -720 6 1039 245 341 79 42 chr17 59544183 59544373 -35728278 - MIRc SINE MIR 0 268 72 7 1039 452 48 0 16 chr17 59544939 59545003 -35727648 + (TA)n Simple_repeat Simple_repeat 2 64 0 7 1039 336 83 0 0 chr17 59545140 59545188 -35727463 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 1039 283 310 11 0 chr17 59545312 59545399 -35727252 + U6 snRNA snRNA 20 107 0 7 1039 1342 337 30 37 chr17 59545582 59546238 -35726413 + Lx8 LINE L1 6102 6753 -720 7 1039 333 327 119 48 chr17 59546287 59547002 -35725649 - L1MA6 LINE L1 -118 6182 5414 7 1039 22 0 0 0 chr17 59547006 59547028 -35725623 + AT_rich Low_complexity Low_complexity 1 22 0 7 1039 210 114 22 22 chr17 59547125 59547170 -35725481 + T-rich Low_complexity Low_complexity 2 46 0 7 1039 311 221 92 35 chr17 59547354 59547590 -35725061 - L1MA6 LINE L1 -1439 4704 4453 7 1039 230 193 18 0 chr17 59547815 59547872 -35724779 + (TTTG)n Simple_repeat Simple_repeat 3 60 0 7 1039 336 265 47 35 chr17 59548114 59548286 -35724365 + L1M2 LINE L1 3809 3982 -2161 7 1039 22 80 0 0 chr17 59548533 59548583 -35724068 + AT_rich Low_complexity Low_complexity 1 50 0 8 1039 847 27 18 0 chr17 59548679 59548789 -35723862 + (TC)n Simple_repeat Simple_repeat 1 112 0 8 1039 511 275 16 48 chr17 59548960 59549147 -35723504 - Lx7 LINE L1 -1148 6548 6368 8 1039 23 0 0 0 chr17 59549383 59549406 -35723245 + AT_rich Low_complexity Low_complexity 1 23 0 8 1039 298 239 54 31 chr17 59551253 59551351 -35721300 + MLT1E2 LTR MaLR 2 114 -391 8 1039 657 309 76 82 chr17 59551361 59551843 -35720808 + RMER1A Other Other 84 509 -557 8 1039 216 0 0 0 chr17 59551843 59551867 -35720784 + (TA)n Simple_repeat Simple_repeat 2 25 0 8 1039 269 89 22 0 chr17 59552937 59552982 -35719669 + (GA)n Simple_repeat Simple_repeat 1 46 0 8 1039 275 222 0 12 chr17 59553013 59553095 -35719556 + GA-rich Low_complexity Low_complexity 5 85 0 8 1039 272 365 42 55 chr17 59553097 59553186 -35719465 + B3 SINE B2 48 133 -83 8 1039 302 43 0 0 chr17 59553186 59553232 -35719419 - L1_Mus2 LINE L1 0 6566 6521 9 1039 272 365 42 55 chr17 59553232 59553307 -35719344 + B3 SINE B2 134 210 -6 8 1039 12187 185 28 55 chr17 59553699 59555887 -35716764 + Lx4B LINE L1 901 3000 -2877 9 1039 1981 81 4 14 chr17 59555887 59556164 -35716487 + L1_Mus2 LINE L1 6293 6566 0 9 1039 12187 181 28 63 chr17 59556164 59556215 -35716436 + Lx4B LINE L1 3001 3031 -2846 9 1039 1030 129 0 0 chr17 59556215 59556362 -35716289 + B1_Mus1 SINE Alu 1 147 -1 9 1039 13440 193 31 76 chr17 59556362 59560102 -35712549 + Lx4B LINE L1 3032 6748 -310 9 1039 21 0 0 0 chr17 59560717 59560738 -35711913 + AT_rich Low_complexity Low_complexity 1 21 0 9 1039 717 233 172 0 chr17 59564037 59564200 -35708451 + B3 SINE B2 1 191 -25 9 1039 216 0 0 0 chr17 59564867 59564891 -35707760 + (TA)n Simple_repeat Simple_repeat 2 25 0 9 1039 1120 82 7 0 chr17 59564892 59565039 -35707612 - B1_Mus1 SINE Alu 0 148 1 9 1039 2764 149 122 13 chr17 59565799 59566341 -35706310 + MT2B LTR ERVL 1 601 0 9 1039 347 353 35 42 chr17 59567903 59568216 -35704435 + L1ME3B LINE L1 5537 5847 -393 9 1039 25 51 0 0 chr17 59568606 59568645 -35704006 + AT_rich Low_complexity Low_complexity 1 39 0 1 1039 483 309 44 5 chr17 59570543 59570748 -35701903 - L1MA5 LINE L1 -361 5939 5727 1 1039 31 26 0 0 chr17 59570825 59570863 -35701788 + AT_rich Low_complexity Low_complexity 1 38 0 1 1039 1805 240 10 5 chr17 59572640 59573025 -35699626 + MTC LTR MaLR 1 387 -34 1 1039 1651 80 22 0 chr17 59573676 59573902 -35698749 + L1_Mus1 LINE L1 6331 6561 -6 1 1039 849 92 0 0 chr17 59573906 59574026 -35698625 + (GAAA)n Simple_repeat Simple_repeat 4 123 0 1 1039 280 267 45 91 chr17 59576133 59576331 -35696320 + L1MEc LINE L1 796 984 -5416 1 1039 285 283 68 80 chr17 59576526 59576842 -35695809 - L1M2 LINE L1 -737 5563 5261 1 1039 2770 151 12 41 chr17 59577003 59577488 -35695163 + Lx3B LINE L1 6501 6971 -2 1 1039 350 266 88 0 chr17 59577537 59577729 -35694922 - L1M2 LINE L1 -3732 2411 2203 1 1039 575 315 102 25 chr17 59577782 59577957 -35694694 - Lx8 LINE L1 -38 7435 7231 1 1039 186 43 0 0 chr17 59577957 59577980 -35694671 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1039 575 315 102 25 chr17 59577980 59578165 -35694486 - Lx8 LINE L1 -243 7230 7047 1 1039 316 268 99 0 chr17 59578184 59578255 -35694396 + B3A SINE B2 3 80 -118 1 1039 216 0 0 0 chr17 59578431 59578455 -35694196 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 1039 405 0 0 0 chr17 59578455 59578499 -35694152 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1039 404 278 110 4 chr17 59578522 59578744 -35693907 - Lx8 LINE L1 -1796 5900 5652 1 1039 247 203 87 0 chr17 59578787 59578856 -35693795 - Lx8 LINE L1 -441 5439 5365 1 1039 539 294 14 0 chr17 59579245 59579388 -35693263 - B1_Mur2 SINE Alu -2 147 3 1 1039 278 240 46 7 chr17 59579388 59579539 -35693112 + (TA)n Simple_repeat Simple_repeat 1 157 0 1 1039 505 266 87 66 chr17 59579679 59580045 -35692606 - L1M2 LINE L1 -1365 4778 4405 1 1039 262 294 74 23 chr17 59580176 59580387 -35692264 - L1M2 LINE L1 -1903 4237 4018 1 1039 266 250 58 14 chr17 59580755 59580824 -35691827 - PB1D9 SINE Alu 0 120 49 1 1039 410 148 10 0 chr17 59580824 59580925 -35691726 + (TCTA)n Simple_repeat Simple_repeat 4 105 0 1 1039 1736 191 64 78 chr17 59582213 59582577 -35690074 + RMER4A LTR ERVK 1 361 -105 1 1039 375 23 0 0 chr17 59582577 59582621 -35690030 + (TC)n Simple_repeat Simple_repeat 1 44 0 1 1039 1736 191 64 78 chr17 59582621 59582728 -35689923 + RMER4A LTR ERVK 362 465 -1 1 1039 205 49 98 0 chr17 59584008 59584049 -35688602 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 1 1039 239 180 20 0 chr17 59584098 59584148 -35688503 + (CAAA)n Simple_repeat Simple_repeat 4 54 0 1 1039 800 303 83 28 chr17 59585305 59585668 -35686983 + Lx8 LINE L1 7057 7439 -34 1 1039 2212 185 54 21 chr17 59585697 59586334 -35686317 - Lx6 LINE L1 -1407 6053 5393 1 1039 1050 276 42 7 chr17 59586319 59586361 -35686290 + Lx6 LINE L1 7136 7177 -283 1 1039 519 17 0 0 chr17 59586361 59586421 -35686230 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 1039 1050 276 42 7 chr17 59586421 59586688 -35685963 + Lx6 LINE L1 7178 7456 -4 1 1039 227 369 62 9 chr17 59587222 59587334 -35685317 + MER5A DNA MER1_type 18 135 -54 1 1039 312 368 104 44 chr17 59587844 59588036 -35684615 + MLT1E LTR MaLR 191 391 -236 1 1039 977 100 18 6 chr17 59588036 59588207 -35684444 + (GGAA)n Simple_repeat Simple_repeat 4 176 0 1 1039 371 357 97 16 chr17 59588207 59588426 -35684225 + MLT1E LTR MaLR 392 653 0 1 1039 386 385 61 56 chr17 59588515 59589054 -35683597 + MLT1E-int LTR MaLR 948 1489 0 1 1039 356 239 89 22 chr17 59589115 59589205 -35683446 + ORR1D2 LTR MaLR 8 103 -267 1 1039 3036 3 0 0 chr17 59589205 59589579 -35683072 - L1Md_A LINE L1 -659 5923 5550 1 1039 5959 3 0 0 chr17 59589579 59590239 -35682412 + L1Md_A LINE L1 5923 6582 0 1 1039 250 374 30 0 chr17 59590242 59590341 -35682310 + ORR1D2 LTR MaLR 86 187 -197 1 1039 514 265 83 39 chr17 59590386 59590590 -35682061 + ORR1D2 LTR MaLR 158 370 0 1 1039 369 93 0 0 chr17 59590643 59590697 -35681954 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1039 243 0 0 0 chr17 59591001 59591028 -35681623 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 1 1039 1619 147 56 7 chr17 59591030 59591317 -35681334 - Lx3_Mus LINE L1 -18 6991 6691 1 1039 441 306 7 7 chr17 59594064 59594202 -35678449 - Lx8 LINE L1 -131 7342 7205 1 1039 483 87 0 0 chr17 59594590 59594659 -35677992 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 1039 1990 99 52 3 chr17 59594720 59595025 -35677626 + L1_Mus3 LINE L1 6313 6632 -6 1 1039 675 57 0 0 chr17 59595624 59595712 -35676939 + (GA)n Simple_repeat Simple_repeat 2 89 0 1 1039 654 13 0 0 chr17 59598038 59598113 -35674538 + (GAA)n Simple_repeat Simple_repeat 3 77 0 1 1039 417 30 45 0 chr17 59598366 59598433 -35674218 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 1039 2268 92 3 60 chr17 59598769 59599116 -35673535 - ORR1A2 LTR MaLR 0 327 1 1 1039 363 240 83 112 chr17 59599185 59599354 -35673297 + RSINE1 SINE B4 2 165 0 1 1039 227 203 17 0 chr17 59599354 59599413 -35673238 + (CATA)n Simple_repeat Simple_repeat 3 62 0 1 1039 882 66 0 0 chr17 59600208 59600330 -35672321 + (GAA)n Simple_repeat Simple_repeat 3 124 0 1 1039 224 291 18 0 chr17 59600344 59600399 -35672252 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1039 436 128 0 136 chr17 59600446 59600564 -35672087 - Lx3A LINE L1 -6 6975 6874 1 1039 1091 106 21 21 chr17 59600563 59600755 -35671896 + L1_Mur1 LINE L1 3460 3651 -2235 1 1039 180 0 0 0 chr17 59603335 59603355 -35669296 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1039 342 0 0 0 chr17 59605330 59605368 -35667283 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1039 22 35 0 0 chr17 59605477 59605506 -35667145 + AT_rich Low_complexity Low_complexity 1 29 0 1 1039 21 71 0 0 chr17 59605875 59605917 -35666734 + AT_rich Low_complexity Low_complexity 1 42 0 1 1039 592 308 0 0 chr17 59606484 59606617 -35666034 + B3A SINE B2 36 168 -30 1 1039 1620 48 6 3 chr17 59606619 59606952 -35665699 + (GGGAGA)n Simple_repeat Simple_repeat 1 333 0 1 1039 230 128 43 0 chr17 59608197 59608244 -35664407 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 1 1039 749 311 45 48 chr17 59608314 59608666 -35663985 - Lx8 LINE L1 -121 7352 7002 1 1039 239 293 115 9 chr17 59608678 59608787 -35663864 - Lx8 LINE L1 -1141 6503 6289 1 1039 254 194 0 11 chr17 59609229 59609302 -35663349 - L1MA4 LINE L1 -374 5926 5824 1 1039 282 331 49 38 chr17 59609303 59609488 -35663163 - Lx7 LINE L1 -1921 5775 5589 1 1039 310 307 54 10 chr17 59609454 59609739 -35662912 - Lx8 LINE L1 -520 5653 5309 1 1039 476 235 53 73 chr17 59609771 59610046 -35662605 - Lx7 LINE L1 -4 7692 7305 1 1039 254 314 63 19 chr17 59610069 59610228 -35662423 - L1_Rod LINE L1 -632 5215 5050 1 1039 303 357 101 20 chr17 59610771 59611077 -35661574 - L1M4b LINE L1 -6930 404 74 1 1039 240 315 14 0 chr17 59611113 59611186 -35661465 + PB1D10 SINE Alu 44 117 0 1 1039 408 20 0 0 chr17 59611194 59611243 -35661408 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1039 204 290 49 20 chr17 59611843 59611945 -35660706 + L2a LINE L2 2005 2109 -1310 1 1039 21 0 0 0 chr17 59611985 59612006 -35660645 + AT_rich Low_complexity Low_complexity 1 21 0 1 1039 210 339 0 0 chr17 59612818 59612877 -35659774 + L2a LINE L2 2691 2749 -670 1 1039 492 282 36 18 chr17 59613138 59613304 -35659347 + MLT1C LTR MaLR 267 435 -32 1 1039 1870 107 93 15 chr17 59613683 59614007 -35658644 + Lx3_Mus LINE L1 6652 7000 -9 1 1039 555 319 13 30 chr17 59614123 59614359 -35658292 - Lx9 LINE L1 -633 7011 6780 1 1039 412 322 89 44 chr17 59614377 59614715 -35657936 + Lx9 LINE L1 7084 7436 -208 1 1039 789 304 105 32 chr17 59615330 59616014 -35656637 + L1MC1 LINE L1 4617 5350 -796 1 1039 517 291 67 19 chr17 59616026 59616236 -35656415 + L1MC1 LINE L1 5472 5691 -642 1 1039 1281 261 103 30 chr17 59616246 59616780 -35655871 - Lx9 LINE L1 -2 7642 7070 1 1039 796 344 47 8 chr17 59616781 59617311 -35655340 + L1MC1 LINE L1 5699 6249 -84 1 1039 254 272 67 19 chr17 59617390 59617495 -35655156 + L2a LINE L2 3309 3418 -8 1 1039 321 26 0 0 chr17 59618580 59618618 -35654033 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 1 1039 707 33 11 0 chr17 59618742 59618832 -35653819 + (TC)n Simple_repeat Simple_repeat 2 92 0 1 1039 516 291 66 71 chr17 59618906 59619117 -35653534 - B3 SINE B2 -4 212 3 1 1039 570 148 0 0 chr17 59619127 59619242 -35653409 + (TG)n Simple_repeat Simple_repeat 2 116 0 1 1039 565 239 0 0 chr17 59619544 59619653 -35652998 + PB1D9 SINE Alu 1 109 -11 1 1039 3250 21 0 0 chr17 59620500 59620876 -35651775 + L1Md_F2 LINE L1 5211 5586 -297 1 1039 7786 47 6 3 chr17 59620876 59621857 -35650794 + L1Md_F2 LINE L1 5587 6570 -12 1 1039 213 39 0 0 chr17 59621893 59621919 -35650732 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1039 765 68 26 0 chr17 59621919 59622035 -35650616 + (GA)n Simple_repeat Simple_repeat 2 121 0 1 1039 228 214 0 0 chr17 59622046 59622088 -35650563 + G-rich Low_complexity Low_complexity 2 43 0 1 1039 1780 200 81 64 chr17 59622163 59622680 -35649971 + RLTR11A2 LTR ERVK 2 527 0 1 1039 216 188 0 0 chr17 59622801 59622870 -35649781 + T-rich Low_complexity Low_complexity 1 69 0 1 1039 228 359 17 8 chr17 59623361 59623479 -35649172 + PB1D7 SINE Alu 1 119 -1 1 1039 1175 285 102 27 chr17 59623491 59624082 -35648569 + RLTR18B LTR ERVK 1 616 0 1 1039 25 0 0 0 chr17 59624611 59624636 -35648015 + AT_rich Low_complexity Low_complexity 1 25 0 1 1039 3432 62 2 2 chr17 59624636 59625074 -35647577 - L1_Mus1 LINE L1 -2 6565 6128 1 1039 253 47 23 23 chr17 59625086 59625130 -35647521 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 1039 360 0 0 0 chr17 59625269 59625309 -35647342 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1039 477 0 0 0 chr17 59625309 59625361 -35647290 + (GA)n Simple_repeat Simple_repeat 1 53 0 1 1039 2866 103 2 31 chr17 59625724 59626143 -35646508 + MTB_Mm LTR MaLR 1 407 0 1 1039 213 154 0 0 chr17 59626826 59626865 -35645786 + (TTA)n Simple_repeat Simple_repeat 3 41 0 1 1039 348 64 0 0 chr17 59627628 59627675 -35644976 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 1039 293 172 16 0 chr17 59628651 59628715 -35643936 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 1039 249 204 0 0 chr17 59628866 59628915 -35643736 + Lx9 LINE L1 7392 7440 -204 1 1039 477 295 6 51 chr17 59629061 59629218 -35643433 - Lx8 LINE L1 -1043 6430 6281 1 1039 34 72 0 0 chr17 59629428 59629497 -35643154 + AT_rich Low_complexity Low_complexity 1 69 0 1 1039 293 279 55 18 chr17 59629622 59629786 -35642865 - L1MA4A LINE L1 -364 5939 5770 1 1039 401 293 56 28 chr17 59629899 59630078 -35642573 - MTEb LTR MaLR 0 379 196 1 1039 368 291 19 10 chr17 59630126 59630230 -35642421 - MTEb LTR MaLR -266 113 9 1 1039 2083 43 0 0 chr17 59630530 59630787 -35641864 + L1_Mus1 LINE L1 5918 6174 -393 1 1039 238 235 131 36 chr17 59630914 59630998 -35641653 + MTD LTR MaLR 6 97 -322 1 1039 623 274 45 20 chr17 59631006 59631207 -35641444 - Lx6 LINE L1 0 7460 7255 1 1039 477 336 112 29 chr17 59631208 59631484 -35641167 + MTD LTR MaLR 116 414 -5 1 1039 381 206 0 0 chr17 59631719 59631821 -35640830 + (TG)n Simple_repeat Simple_repeat 1 102 0 2 1039 404 321 21 49 chr17 59633073 59633217 -35639434 + RSINE1 SINE B4 22 161 -4 2 1039 423 0 0 0 chr17 59633221 59633268 -35639383 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1039 260 262 24 0 chr17 59633407 59633491 -35639160 + (TG)n Simple_repeat Simple_repeat 1 86 0 2 1039 327 318 214 13 chr17 59633512 59633742 -35638909 - B4A SINE B4 -14 278 3 2 1039 211 293 17 33 chr17 59634535 59634595 -35638056 - ID4_ SINE ID -2 81 23 2 1039 234 194 0 0 chr17 59634960 59635022 -35637629 + GA-rich Low_complexity Low_complexity 1 62 0 2 1039 660 26 0 0 chr17 59635340 59635418 -35637233 + (TC)n Simple_repeat Simple_repeat 1 78 0 2 1039 288 0 0 0 chr17 59635510 59635542 -35637109 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1039 311 206 15 0 chr17 59636021 59636089 -35636562 + Lx5 LINE L1 6640 6708 -342 2 129 40477 14 2 6 chr17 59636766 59642937 -35629714 - L1Md_A LINE L1 0 6582 440 2 1040 1454 65 0 0 chr17 59642938 59643123 -35629528 - L1_Mus1 LINE L1 -9 6558 6374 2 1040 2025 72 0 4 chr17 59643123 59643382 -35629269 + L1_Mus1 LINE L1 5972 6230 -337 2 1040 477 306 25 65 chr17 59644212 59644411 -35628240 + B3 SINE B2 26 216 0 2 1040 436 312 7 52 chr17 59644679 59644814 -35627837 + RMER10B LTR ERVL 267 395 -3 2 1040 340 272 118 16 chr17 59645052 59645339 -35627312 - L1MB5 LINE L1 -152 6032 5724 2 1040 285 298 11 11 chr17 59645548 59645643 -35627008 + GA-rich Low_complexity Low_complexity 2 96 0 2 1040 300 38 18 54 chr17 59645889 59645945 -35626706 + (TAA)n Simple_repeat Simple_repeat 1 54 0 2 1040 34 0 0 0 chr17 59646010 59646044 -35626607 + AT_rich Low_complexity Low_complexity 1 34 0 2 1040 1344 236 77 15 chr17 59646118 59646510 -35626141 + Lx9 LINE L1 7221 7636 -8 2 1040 310 326 93 44 chr17 59646571 59646776 -35625875 - L1MD LINE L1 -841 5518 5304 2 1040 860 299 36 39 chr17 59646941 59647272 -35625379 - RMER15 LTR ERVL 0 575 246 2 1040 283 348 18 18 chr17 59647877 59648044 -35624607 - L1M4b LINE L1 -6262 1072 906 2 1040 266 132 19 0 chr17 59648932 59648985 -35623666 + (TA)n Simple_repeat Simple_repeat 1 54 0 2 1040 507 17 0 0 chr17 59649260 59649320 -35623331 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 2 1040 21 0 0 0 chr17 59649340 59649361 -35623290 + AT_rich Low_complexity Low_complexity 1 21 0 2 1040 345 24 0 0 chr17 59649648 59649690 -35622961 + (TTA)n Simple_repeat Simple_repeat 1 42 0 2 1040 2163 77 23 3 chr17 59649690 59649989 -35622662 - L1_Mus1 LINE L1 -6 6561 6257 2 1040 398 355 33 88 chr17 59650478 59650706 -35621945 - B4A SINE B4 -3 289 82 2 1040 291 28 0 0 chr17 59650706 59650742 -35621909 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 2 1040 398 355 33 88 chr17 59650742 59650819 -35621832 - B4A SINE B4 -211 81 1 2 1040 249 163 0 0 chr17 59650863 59650912 -35621739 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1040 336 200 0 0 chr17 59651755 59651825 -35620826 + (TA)n Simple_repeat Simple_repeat 1 70 0 2 1040 3210 164 55 8 chr17 59651928 59652575 -35620076 + Lx3_Mus LINE L1 5826 6498 -511 2 1040 24 0 0 0 chr17 59652579 59652603 -35620048 + AT_rich Low_complexity Low_complexity 1 24 0 2 1040 255 61 0 0 chr17 59652838 59652871 -35619780 + (TCC)n Simple_repeat Simple_repeat 2 34 0 2 1040 223 231 0 0 chr17 59652872 59652924 -35619727 + CT-rich Low_complexity Low_complexity 2 53 0 2 1040 308 350 78 36 chr17 59653015 59653208 -35619443 - L1M4c LINE L1 -3537 2845 2645 2 1040 198 0 0 0 chr17 59653241 59653263 -35619388 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 1040 356 308 18 30 chr17 59653361 59653525 -35619126 - L1MA5 LINE L1 -375 5925 5764 2 1040 306 230 60 0 chr17 59653562 59653662 -35618989 - L1M4c LINE L1 -4491 1893 1788 2 1040 264 347 41 0 chr17 59653690 59653788 -35618863 - L1M4c LINE L1 -5905 479 378 2 1040 3585 43 65 0 chr17 59654894 59655340 -35617311 + MT2C_Mm LTR ERVL 1 475 0 2 1040 1283 229 151 10 chr17 59655533 59655931 -35616720 + Lx9 LINE L1 7000 7456 -188 2 1040 306 0 0 0 chr17 59655931 59655965 -35616686 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1040 441 0 0 0 chr17 59657149 59657198 -35615453 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1040 859 270 51 131 chr17 59657571 59658104 -35614547 + Lx8 LINE L1 6391 6880 -593 2 1040 204 270 16 0 chr17 59658153 59658216 -35614435 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 1040 189 0 0 0 chr17 59658524 59658545 -35614106 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 2 1040 2462 136 3 3 chr17 59658574 59658959 -35613692 - L1_Mus4 LINE L1 -5 6631 6247 2 1040 516 68 0 0 chr17 59659883 59659956 -35612695 + (TG)n Simple_repeat Simple_repeat 2 74 0 2 1040 497 228 0 6 chr17 59660833 59661001 -35611650 + GA-rich Low_complexity Low_complexity 2 168 0 2 1040 472 289 161 53 chr17 59661003 59661358 -35611293 - Lx9 LINE L1 -1143 6501 6109 2 1040 22 35 0 0 chr17 59661579 59661608 -35611043 + AT_rich Low_complexity Low_complexity 1 29 0 2 1040 222 118 0 0 chr17 59661611 59661645 -35611006 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 1040 432 318 101 28 chr17 59661653 59661831 -35610820 + B3 SINE B2 26 216 0 2 1040 1095 55 0 7 chr17 59662791 59662939 -35609712 - L1Md_A LINE L1 -1 6581 6435 2 1040 2950 53 0 6 chr17 59662939 59663302 -35609349 + L1Md_T LINE L1 6084 6444 -138 2 1040 887 104 0 0 chr17 59663314 59663439 -35609212 - B1_Mus1 SINE Alu -21 127 3 2 1040 25 31 0 0 chr17 59663443 59663475 -35609176 + AT_rich Low_complexity Low_complexity 1 32 0 2 1040 1804 120 3 32 chr17 59663653 59663964 -35608687 + L1_Mur1 LINE L1 4863 5164 -722 2 1040 1016 129 7 0 chr17 59664268 59664415 -35608236 + B1_Mus1 SINE Alu 1 148 0 2 1040 653 222 0 11 chr17 59664416 59664598 -35608053 + A-rich Low_complexity Low_complexity 1 180 0 2 1040 1516 268 60 77 chr17 59664600 59665390 -35607261 + Lx9 LINE L1 5111 5927 -1717 2 1040 361 271 139 58 chr17 59665394 59665688 -35606963 + Lx9 LINE L1 6121 6438 -1206 2 1040 1248 206 201 48 chr17 59665693 59666156 -35606495 - Lx7 LINE L1 0 7696 7163 2 1040 1323 260 154 27 chr17 59666643 59667725 -35604926 + Lx9 LINE L1 6425 7643 -1 2 1040 677 221 181 16 chr17 59667823 59668016 -35604635 - URR1B DNA MER1_type 0 225 1 2 1040 346 345 109 6 chr17 59668217 59668287 -35604364 + MLT1A1 LTR MaLR 215 286 -122 2 1040 186 103 0 0 chr17 59668287 59668316 -35604335 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 1040 346 345 109 6 chr17 59668316 59668420 -35604231 + MLT1A1 LTR MaLR 287 406 -2 2 1040 38905 32 3 6 chr17 59668802 59674970 -35597681 - L1Md_T LINE L1 -1 6581 440 2 1040 27 49 0 0 chr17 59675651 59675692 -35596959 + AT_rich Low_complexity Low_complexity 1 41 0 2 1040 835 328 48 7 chr17 59678495 59678784 -35593867 + Lx8 LINE L1 6854 7154 -319 2 1040 201 222 16 16 chr17 59679141 59679205 -35593446 + (TA)n Simple_repeat Simple_repeat 1 64 0 2 1040 215 219 0 0 chr17 59680187 59680228 -35592423 + CT-rich Low_complexity Low_complexity 1 41 0 2 1040 511 238 8 30 chr17 59680228 59680362 -35592289 - B1_Mur3 SINE Alu -14 135 5 2 1040 24 53 0 0 chr17 59680388 59680426 -35592225 + AT_rich Low_complexity Low_complexity 1 38 0 2 1040 21 57 0 0 chr17 59681562 59681597 -35591054 + AT_rich Low_complexity Low_complexity 1 35 0 2 1040 356 248 26 0 chr17 59683549 59683635 -35589016 - B3A SINE B2 -99 96 2 2 1040 451 292 23 15 chr17 59683930 59684062 -35588589 + ID_B1 SINE B4 92 224 0 2 1040 333 0 0 0 chr17 59684150 59684187 -35588464 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1040 294 29 0 0 chr17 59685372 59685407 -35587244 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 2 1040 25 31 0 0 chr17 59685998 59686030 -35586621 + AT_rich Low_complexity Low_complexity 1 32 0 2 1040 180 97 0 0 chr17 59686403 59686434 -35586217 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1040 1860 144 36 14 chr17 59686622 59686982 -35585669 + RLTR9A LTR ERVK 1 368 0 2 1040 3826 252 72 26 chr17 59689434 59690546 -35582105 + Lx7 LINE L1 6311 7473 -223 2 1040 316 294 61 10 chr17 59690798 59690994 -35581657 + L1_Mur3 LINE L1 5207 5412 -468 2 1040 248 326 107 16 chr17 59691032 59691219 -35581432 + Lx8 LINE L1 7000 7203 -270 2 1040 2920 134 41 18 chr17 59691224 59691717 -35580934 + Lx3B LINE L1 6464 6967 -6 2 1040 829 71 39 0 chr17 59691728 59691855 -35580796 + (GGAAA)n Simple_repeat Simple_repeat 4 135 0 2 1040 346 304 0 0 chr17 59691930 59692022 -35580629 + Lx7 LINE L1 7209 7300 -396 2 1040 293 159 0 16 chr17 59692129 59692193 -35580458 + (CA)n Simple_repeat Simple_repeat 1 63 0 2 1040 264 170 0 0 chr17 59692526 59692579 -35580072 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1040 22 56 0 0 chr17 59693342 59693378 -35579273 + AT_rich Low_complexity Low_complexity 1 36 0 2 1040 222 118 0 0 chr17 59693469 59693503 -35579148 + (CATA)n Simple_repeat Simple_repeat 3 36 0 2 1040 22 0 0 0 chr17 59694251 59694273 -35578378 + AT_rich Low_complexity Low_complexity 1 22 0 2 1040 242 29 29 0 chr17 59694402 59694437 -35578214 + (TTG)n Simple_repeat Simple_repeat 2 37 0 2 1040 223 229 59 178 chr17 59694546 59694647 -35578004 - PB1D10 SINE Alu -60 89 1 2 1040 3258 254 91 5 chr17 59695113 59696085 -35576566 - Lx9 LINE L1 -23 7621 6567 2 1040 3267 88 11 9 chr17 59696470 59696928 -35575723 - Lx3A LINE L1 -351 6630 6172 2 1040 26 74 0 0 chr17 59696957 59697011 -35575640 + AT_rich Low_complexity Low_complexity 1 54 0 2 1040 647 63 9 26 chr17 59697012 59697126 -35575525 + L1Md_F2 LINE L1 6471 6582 0 2 1040 1863 226 133 49 chr17 59698038 59698587 -35574064 - RMER19B LTR ERVK 0 902 308 2 1040 880 111 0 11 chr17 59698732 59698914 -35573737 + (TA)n Simple_repeat Simple_repeat 1 180 0 2 1040 309 117 0 0 chr17 59698914 59698974 -35573677 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 2 1040 640 160 0 8 chr17 59698977 59699242 -35573409 + (TA)n Simple_repeat Simple_repeat 1 263 0 2 1040 303 222 28 0 chr17 59699255 59699327 -35573324 - Lx7 LINE L1 -1532 6164 6091 3 1040 227 262 107 0 chr17 59699329 59699384 -35573267 - ORR1C1 LTR MaLR -281 97 35 3 1040 393 22 0 0 chr17 59699384 59699430 -35573221 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1040 227 262 107 0 chr17 59699430 59699458 -35573193 - ORR1C1 LTR MaLR -344 34 6 3 1040 3091 251 91 48 chr17 59699462 59700929 -35571722 - L1_Mur3 LINE L1 -3082 2798 1270 3 1040 24 53 0 0 chr17 59700938 59700976 -35571675 + AT_rich Low_complexity Low_complexity 1 38 0 3 1040 38125 46 0 3 chr17 59700976 59707639 -35565012 - L1Md_T LINE L1 0 6585 1 3 1040 275 274 425 11 chr17 59707665 59707926 -35564725 - L1_Mur3 LINE L1 -6484 1244 876 3 1040 355 250 65 24 chr17 59708304 59708427 -35564224 - L1_Mur3 LINE L1 -6899 829 702 3 1040 1862 246 22 57 chr17 59708488 59708980 -35563671 - Lx5 LINE L1 -4 7046 6572 3 1040 603 189 0 0 chr17 59708981 59709087 -35563564 - U6 snRNA snRNA 0 107 2 3 1040 2578 50 0 0 chr17 59710092 59710410 -35562241 + L1_Mus1 LINE L1 6250 6567 0 3 1040 293 307 195 28 chr17 59711841 59712123 -35560528 - L3b LINE CR1 -6 476 148 3 1040 208 189 19 19 chr17 59713146 59713200 -35559451 + (CATATA)n Simple_repeat Simple_repeat 5 58 0 3 1040 21 57 0 0 chr17 59713206 59713241 -35559410 + AT_rich Low_complexity Low_complexity 1 35 0 3 1040 232 35 86 17 chr17 59713302 59713360 -35559291 + (TTTG)n Simple_repeat Simple_repeat 3 64 0 3 1040 1002 120 0 0 chr17 59713360 59713502 -35559149 - B1_Mus1 SINE Alu -5 143 2 3 1040 24 0 0 0 chr17 59713584 59713608 -35559043 + AT_rich Low_complexity Low_complexity 1 24 0 3 1040 1638 326 65 38 chr17 59713836 59714779 -35557872 + Lx8 LINE L1 6204 7171 -302 3 1040 2595 62 15 6 chr17 59714849 59715191 -35557460 + IAPEY_LTR LTR ERVK 41 385 0 3 1040 416 220 37 91 chr17 59715199 59715430 -35557221 - RLTR31_Mur LTR ERVK -164 277 1 3 1040 1060 313 48 39 chr17 59715470 59715885 -35556766 - MTD LTR MaLR 0 419 1 3 1040 350 269 141 7 chr17 59715887 59716029 -35556622 + Lx8 LINE L1 7228 7388 -85 3 1040 937 100 15 0 chr17 59716060 59716190 -35556461 + B1_Mus1 SINE Alu 4 135 -13 3 1040 189 0 0 0 chr17 59716190 59716211 -35556440 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1040 41229 5 0 0 chr17 59716227 59722803 -35549848 - L1Md_A LINE L1 0 6582 7 3 1040 408 88 0 0 chr17 59722819 59722876 -35549775 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 3 1040 420 20 0 0 chr17 59722876 59722925 -35549726 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1040 4441 76 58 2 chr17 59722949 59723568 -35549083 + L1_Mus3 LINE L1 5982 6635 -3 3 1040 34 0 0 0 chr17 59723963 59723997 -35548654 + AT_rich Low_complexity Low_complexity 1 34 0 3 1040 717 233 33 0 chr17 59724329 59724479 -35548172 + Lx7 LINE L1 6781 6935 -761 3 1040 1421 81 0 0 chr17 59724482 59724668 -35547983 - LTRIS_Mm LTR ERV1 0 482 297 3 1040 252 0 0 0 chr17 59724668 59724696 -35547955 + (TTA)n Simple_repeat Simple_repeat 3 30 0 3 1040 1601 42 0 0 chr17 59724696 59724888 -35547763 - L1Md_F3 LINE L1 -27 6557 6366 3 1040 2536 44 0 0 chr17 59724888 59725203 -35547448 - LTRIS_Mm LTR ERV1 -167 315 1 3 1040 1499 239 62 60 chr17 59725208 59725676 -35546975 + Lx7 LINE L1 6939 7407 -289 3 1040 1861 107 270 7 chr17 59726398 59726802 -35545849 + Lx2A LINE L1 6499 7008 0 3 1040 23 54 0 0 chr17 59727156 59727193 -35545458 + AT_rich Low_complexity Low_complexity 1 37 0 3 1040 297 0 0 0 chr17 59728562 59728595 -35544056 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1040 21 0 0 0 chr17 59729569 59729590 -35543061 + AT_rich Low_complexity Low_complexity 1 21 0 3 1040 600 53 0 0 chr17 59730224 59730300 -35542351 + (TA)n Simple_repeat Simple_repeat 2 77 0 3 1040 580 310 30 30 chr17 59731123 59731389 -35541262 - Lx8 LINE L1 -1012 6461 6196 3 1040 807 305 69 10 chr17 59731462 59731837 -35540814 + Lx8 LINE L1 6461 7003 -641 3 1040 1074 72 0 0 chr17 59732130 59732283 -35540368 + (GAGAA)n Simple_repeat Simple_repeat 2 154 0 3 1040 393 252 14 14 chr17 59732292 59732318 -35540333 + (CAGAGA)n Simple_repeat Simple_repeat 4 29 0 3 1040 1764 65 17 0 chr17 59732318 59732550 -35540101 + L1Md_A LINE L1 6346 6581 -1 3 1040 393 252 14 14 chr17 59732550 59732668 -35539983 + (CAGAGA)n Simple_repeat Simple_repeat 6 123 0 3 1040 343 263 18 2 chr17 59732685 59732806 -35539845 - L1MB7 LINE L1 -207 5957 5837 3 1040 1019 120 11 69 chr17 59733008 59733159 -35539492 + B2_Mm2 SINE B2 1 153 -42 3 1040 374 0 0 21 chr17 59733159 59733206 -35539445 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 3 1040 1019 120 11 69 chr17 59733206 59733242 -35539409 + B2_Mm2 SINE B2 154 177 -18 3 1040 327 221 116 0 chr17 59733248 59733334 -35539317 + L1M2 LINE L1 3072 3167 -2976 3 1040 1548 264 145 78 chr17 59733857 59734539 -35538112 + Lx6 LINE L1 6706 7433 -27 3 1040 217 290 129 0 chr17 59734819 59734912 -35537739 - MIRb SINE MIR -45 223 119 3 1040 2709 74 5 23 chr17 59735996 59736385 -35536266 + L1_Mus3 LINE L1 6235 6616 -22 3 1040 9759 62 2 3 chr17 59736381 59737670 -35534981 + L1_Mm LINE L1 4120 5436 -806 3 1040 3772 54 31 0 chr17 59737670 59738151 -35534500 + L1Md_F2 LINE L1 6086 6581 -1 3 1040 339 241 71 64 chr17 59738151 59738233 -35534418 + L1_Mm LINE L1 5437 5520 -722 3 1040 204 67 0 0 chr17 59738470 59738500 -35534151 + (TTTTTG)n Simple_repeat Simple_repeat 3 32 0 3 1040 295 266 18 9 chr17 59739308 59739422 -35533229 + L1MD LINE L1 4751 4865 -1281 3 1040 27 92 0 0 chr17 59739527 59739603 -35533048 + AT_rich Low_complexity Low_complexity 1 76 0 3 1040 876 326 174 5 chr17 59739689 59740114 -35532537 - Lx8 LINE L1 -133 7340 6844 3 1040 3442 52 31 0 chr17 59740340 59740763 -35531888 + RLTR10C LTR ERVK 1 436 0 3 1040 1017 286 15 24 chr17 59740936 59741266 -35531385 - Lx8 LINE L1 -421 7052 6726 3 1040 236 246 18 0 chr17 59741437 59741494 -35531157 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 1040 3607 49 0 0 chr17 59741573 59742057 -35530594 - L1Md_F2 LINE L1 -563 6019 5536 3 1040 1637 117 36 0 chr17 59742057 59742304 -35530347 + L1_Mus1 LINE L1 6312 6567 0 3 1040 227 204 0 0 chr17 59742377 59742426 -35530225 + A-rich Low_complexity Low_complexity 1 49 0 3 1040 465 224 0 0 chr17 59743383 59743490 -35529161 - Lx3C LINE L1 -9 6967 6861 3 1040 1476 119 5 0 chr17 59743494 59743704 -35528947 - Lx3C LINE L1 -454 6522 6312 3 1040 22 35 0 0 chr17 59744270 59744299 -35528352 + AT_rich Low_complexity Low_complexity 1 29 0 3 1040 516 158 0 0 chr17 59745077 59745172 -35527479 + (TATG)n Simple_repeat Simple_repeat 1 95 0 3 1040 23 33 0 0 chr17 59745356 59745386 -35527265 + AT_rich Low_complexity Low_complexity 1 30 0 3 1040 1001 312 65 39 chr17 59745695 59746206 -35526445 + ORR1D-int LTR MaLR 226 749 -621 3 1040 1717 149 9 73 chr17 59746242 59746583 -35526068 - Lx3B LINE L1 -35 6938 6620 3 1040 1523 111 38 35 chr17 59746596 59746886 -35525765 - RMER12B LTR ERVK -232 1172 882 3 1040 3995 152 83 3 chr17 59746961 59747705 -35524946 - Lx2 LINE L1 0 6997 6194 3 1040 600 14 0 0 chr17 59747782 59747851 -35524800 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 1040 219 386 0 0 chr17 59747862 59747932 -35524719 - PB1D10 SINE Alu -35 82 13 3 1040 439 351 47 17 chr17 59748617 59749089 -35523562 - MER70-int LTR ERVL -3539 1484 999 3 1040 180 231 43 71 chr17 59749089 59749159 -35523492 - L4 LINE RTE -575 1454 1387 3 1040 261 0 0 0 chr17 59749555 59749584 -35523067 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1040 275 309 0 130 chr17 59751439 59751547 -35521104 + MT2B LTR ERVL 164 257 -344 3 1040 585 231 36 29 chr17 59751450 59751588 -35521063 + B1_Mur4 SINE Alu 12 150 0 3 1040 459 0 0 0 chr17 59751679 59751730 -35520921 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 3 1040 289 176 0 0 chr17 59751766 59751817 -35520834 + Lx8 LINE L1 5844 5894 -1579 3 1040 495 0 0 0 chr17 59752175 59752230 -35520421 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1040 261 0 0 0 chr17 59752413 59752442 -35520209 + (TA)n Simple_repeat Simple_repeat 1 29 0 3 1040 294 73 0 0 chr17 59752527 59752568 -35520083 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1040 1719 221 21 40 chr17 59752700 59753128 -35519523 + MTC LTR MaLR 1 420 -1 3 1040 1357 75 21 16 chr17 59753678 59753867 -35518784 - B2_Mm2 SINE B2 -5 190 1 3 1040 225 0 0 0 chr17 59753881 59753906 -35518745 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1040 326 307 70 35 chr17 59754249 59754391 -35518260 + L2 LINE L2 2344 2490 -929 3 1040 357 100 16 32 chr17 59754612 59754674 -35517977 - HAL1-3A_ME LINE L1 -822 2036 1976 3 1040 477 34 0 0 chr17 59754723 59754782 -35517869 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 1040 604 289 101 26 chr17 59755059 59755691 -35516960 - L1M2 LINE L1 -609 5703 5021 3 1040 261 287 63 11 chr17 59755698 59755793 -35516858 - B1F SINE Alu -49 100 1 3 1040 22 0 0 0 chr17 59755966 59755988 -35516663 + AT_rich Low_complexity Low_complexity 1 22 0 3 1040 339 350 97 21 chr17 59755991 59756321 -35516330 - L1M2 LINE L1 -1190 4953 4599 3 1040 1721 158 74 152 chr17 59756337 59756897 -35515754 + RMER6C LTR ERVK 211 690 0 3 1040 239 282 13 0 chr17 59756903 59756981 -35515670 - L1M2 LINE L1 -1575 4568 4490 3 1040 3644 162 83 18 chr17 59757027 59757463 -35515188 - RMER17D2 LTR ERVK -17 792 306 3 1040 765 0 0 0 chr17 59757463 59757548 -35515103 + (GGAGA)n Simple_repeat Simple_repeat 2 86 0 3 1040 3644 162 83 18 chr17 59757548 59757854 -35514797 - RMER17D2 LTR ERVK -504 305 1 3 1040 186 133 0 0 chr17 59757888 59757918 -35514733 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1040 180 0 0 0 chr17 59757973 59757993 -35514658 + (CA)n Simple_repeat Simple_repeat 1 20 0 3 1040 293 360 40 0 chr17 59758321 59758446 -35514205 + B1F SINE Alu 4 133 -16 3 1040 450 301 85 6 chr17 59759655 59759819 -35512832 - B4 SINE B4 -72 220 44 3 1040 649 117 9 9 chr17 59760138 59760250 -35512401 - Lx LINE L1 -7 6647 6536 3 1040 3591 123 0 9 chr17 59760250 59760800 -35511851 + L1_Mus4 LINE L1 5988 6532 -104 3 1040 306 273 27 65 chr17 59761809 59761993 -35510658 + L1M3 LINE L1 5094 5270 -870 3 1040 374 195 0 11 chr17 59762111 59762199 -35510452 + (CATA)n Simple_repeat Simple_repeat 2 88 0 4 1040 357 333 55 5 chr17 59762712 59762914 -35509737 + L1M3 LINE L1 5545 5756 -544 3 1040 1862 303 78 38 chr17 59763046 59763621 -35509030 + Lx9 LINE L1 6389 6998 -646 4 1040 537 30 0 0 chr17 59763621 59763688 -35508963 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 1040 1862 303 78 38 chr17 59763688 59763884 -35508767 + Lx9 LINE L1 6999 7191 -453 4 1040 1015 238 32 41 chr17 59764327 59764669 -35507982 - RLTR15 LTR ERVK -20 339 1 4 1040 459 99 0 0 chr17 59764813 59764884 -35507767 + L1_Mus3 LINE L1 6564 6634 -4 4 1040 1523 179 54 0 chr17 59764983 59765263 -35507388 - ORR1B1 LTR MaLR -5 389 95 4 1040 4419 225 62 72 chr17 59765699 59766707 -35505944 - Lx2 LINE L1 0 6997 6004 4 1040 189 0 0 0 chr17 59766707 59766728 -35505923 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 4 1040 4419 225 62 72 chr17 59766728 59767145 -35505506 - Lx2 LINE L1 -994 6003 5587 4 1040 2166 129 23 0 chr17 59767151 59767493 -35505158 + L1_Mm LINE L1 5224 5573 -310 4 1040 185 408 110 14 chr17 59768083 59768292 -35504359 - MIR SINE MIR 0 262 34 4 1040 21 0 0 0 chr17 59768762 59768783 -35503868 + AT_rich Low_complexity Low_complexity 1 21 0 4 1040 378 0 0 0 chr17 59768783 59768825 -35503826 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1041 30 45 0 0 chr17 59769297 59769341 -35503310 + AT_rich Low_complexity Low_complexity 1 44 0 4 1041 353 340 5 134 chr17 59769447 59769634 -35503017 - RSINE1 SINE B4 0 165 3 4 1041 24 0 0 0 chr17 59769947 59769971 -35502680 + AT_rich Low_complexity Low_complexity 1 24 0 4 1041 26 30 0 0 chr17 59771884 59771917 -35500734 + AT_rich Low_complexity Low_complexity 1 33 0 4 1041 468 0 0 0 chr17 59772813 59772865 -35499786 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 4 1041 180 0 0 0 chr17 59773585 59773605 -35499046 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 4 1041 376 216 20 0 chr17 59773653 59773755 -35498896 - Lx9 LINE L1 -7 7637 7534 4 1041 208 128 51 0 chr17 59774587 59774626 -35498025 + (TTAA)n Simple_repeat Simple_repeat 2 42 0 4 1041 33 100 0 0 chr17 59774669 59774779 -35497872 + AT_rich Low_complexity Low_complexity 1 110 0 4 1041 607 259 7 0 chr17 59775204 59775343 -35497308 - B1_Mur2 SINE Alu -7 142 3 4 1041 768 326 36 74 chr17 59775403 59775927 -35496724 - Lx9 LINE L1 -199 7445 6942 4 1041 1003 235 71 51 chr17 59775923 59776219 -35496432 + L1_Mur3 LINE L1 5448 5749 -131 4 1041 6070 175 120 26 chr17 59776469 59777336 -35495315 + L1_Mur2 LINE L1 918 1803 -4074 4 1041 2404 176 76 16 chr17 59777336 59777834 -35494817 - RLTR11A LTR ERVK 0 528 1 4 1041 12127 171 75 43 chr17 59777834 59778008 -35494643 + L1_Mur2 LINE L1 1804 1989 -3888 4 1041 324 0 0 0 chr17 59778008 59778044 -35494607 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1041 12127 171 75 43 chr17 59778044 59779017 -35493634 + L1_Mur2 LINE L1 1990 3071 -2806 4 1041 243 0 0 0 chr17 59779017 59779044 -35493607 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 1041 12127 171 75 43 chr17 59779044 59779440 -35493211 + L1_Mur2 LINE L1 3072 3469 -2408 4 1041 1035 139 0 0 chr17 59779440 59779620 -35493031 + (GAA)n Simple_repeat Simple_repeat 1 180 0 4 1041 12127 171 75 43 chr17 59779620 59780305 -35492346 + L1_Mur2 LINE L1 3470 4172 -1705 4 1041 1046 241 73 20 chr17 59780305 59780605 -35492046 + RMER6D LTR ERVK 405 720 0 4 1041 24 53 0 0 chr17 59781123 59781161 -35491490 + AT_rich Low_complexity Low_complexity 1 38 0 4 1041 247 292 19 0 chr17 59783717 59783823 -35488828 + T-rich Low_complexity Low_complexity 6 113 0 4 1041 430 360 6 6 chr17 59783969 59784131 -35488520 - RSINE1 SINE B4 -2 163 2 4 1041 254 300 88 11 chr17 59784515 59784606 -35488045 + PB1 SINE Alu 22 119 -8 4 1041 472 295 103 99 chr17 59785776 59786058 -35486593 - Lx8 LINE L1 -866 6607 6325 4 1041 1719 72 16 4 chr17 59786086 59786337 -35486314 + L1_Mus3 LINE L1 6375 6628 -10 4 1041 2499 70 79 0 chr17 59786349 59786691 -35485960 - L1_Mus1 LINE L1 -2 6565 6197 4 1041 1101 83 14 0 chr17 59786741 59786886 -35485765 + B1_Mm SINE Alu 1 147 0 4 1041 2231 231 148 83 chr17 59786945 59787780 -35484871 + RMER19B LTR ERVK 1 890 -12 4 1041 738 299 100 85 chr17 59787868 59788432 -35484219 + Lx6 LINE L1 6478 7460 0 4 1041 342 182 0 0 chr17 59788512 59788578 -35484073 + A-rich Low_complexity Low_complexity 1 66 0 4 1041 4416 58 0 5 chr17 59788714 59789295 -35483356 + L1Md_F2 LINE L1 6013 6582 0 4 1041 237 33 0 0 chr17 59789870 59789900 -35482751 + (TA)n Simple_repeat Simple_repeat 1 30 0 4 1041 25 51 0 0 chr17 59789911 59789950 -35482701 + AT_rich Low_complexity Low_complexity 1 39 0 4 1041 289 258 134 41 chr17 59790932 59791029 -35481622 - B3 SINE B2 -109 107 2 4 1041 24 77 0 0 chr17 59792998 59793050 -35479601 + AT_rich Low_complexity Low_complexity 1 52 0 4 1041 1144 196 22 0 chr17 59794004 59794234 -35478417 + RLTR24 LTR ERV1 1 235 -294 4 1041 1246 228 39 10 chr17 59794246 59794551 -35478100 + Lx7 LINE L1 6790 7103 -593 4 1041 630 262 33 22 chr17 59794566 59794749 -35477902 + Lx7 LINE L1 7160 7344 -352 4 1041 234 0 0 0 chr17 59794838 59794864 -35477787 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 1041 432 0 0 0 chr17 59794878 59794926 -35477725 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 1041 234 266 13 0 chr17 59794943 59795022 -35477629 + Lx7 LINE L1 7617 7696 0 4 1041 270 0 0 0 chr17 59795671 59795701 -35476950 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1041 540 0 0 0 chr17 59795701 59795760 -35476891 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 1041 315 347 67 96 chr17 59795772 59796011 -35476640 - B4A SINE B4 -53 239 8 4 1041 21 82 0 0 chr17 59796612 59796661 -35475990 + AT_rich Low_complexity Low_complexity 1 49 0 4 1041 934 136 17 0 chr17 59797604 59797781 -35474870 + CT-rich Low_complexity Low_complexity 1 180 0 4 1041 477 0 0 0 chr17 59797782 59797835 -35474816 + (TCCC)n Simple_repeat Simple_repeat 4 56 0 4 1041 245 237 0 17 chr17 59797835 59797895 -35474756 + CT-rich Low_complexity Low_complexity 2 60 0 4 1041 796 150 0 36 chr17 59797904 59798042 -35474609 - B1_Mus2 SINE Alu -6 141 9 4 1041 246 105 0 0 chr17 59798664 59798702 -35473949 + (A)n Simple_repeat Simple_repeat 1 38 0 4 1041 180 313 78 94 chr17 59798708 59798888 -35473763 + L4 LINE RTE 129 305 -1724 4 1041 507 73 0 0 chr17 59799283 59799351 -35473300 + (TC)n Simple_repeat Simple_repeat 1 68 0 4 1041 573 23 23 23 chr17 59800118 59800206 -35472445 + (TCTA)n Simple_repeat Simple_repeat 4 91 0 4 1041 417 20 0 0 chr17 59800478 59800528 -35472123 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1041 674 301 41 32 chr17 59800633 59800955 -35471696 + ORR1D2 LTR MaLR 1 379 0 4 1041 21 0 0 0 chr17 59801374 59801395 -35471256 + AT_rich Low_complexity Low_complexity 1 21 0 4 1041 687 281 73 36 chr17 59801506 59801753 -35470898 - ORR1D2 LTR MaLR -2 368 113 4 1041 471 98 56 16 chr17 59801871 59801996 -35470655 + (TA)n Simple_repeat Simple_repeat 1 130 0 4 1041 3345 91 16 0 chr17 59802099 59802552 -35470099 - L1_Mus1 LINE L1 -2 6565 6106 4 1041 2209 74 0 3 chr17 59802552 59802851 -35469800 + L1_Mus1 LINE L1 5748 6045 -522 4 1041 1129 299 71 8 chr17 59802952 59803346 -35469305 + MTD LTR MaLR 1 419 0 4 1041 303 341 45 96 chr17 59803675 59803873 -35468778 - MTD LTR MaLR -184 235 48 4 1041 435 293 32 22 chr17 59803892 59804077 -35468574 - L1_Mur3 LINE L1 -201 5679 5493 4 1041 336 268 92 62 chr17 59804120 59804315 -35468336 + L1M2 LINE L1 3492 3692 -2451 4 1041 524 293 12 23 chr17 59804316 59804487 -35468164 + Lx8 LINE L1 6730 6898 -575 4 1041 264 321 62 42 chr17 59804642 59804834 -35467817 - L1M1 LINE L1 -694 5606 5411 4 1041 296 227 94 0 chr17 59805323 59805451 -35467200 - Lx9 LINE L1 -1 7643 7504 4 1041 2628 246 125 16 chr17 59805491 59805553 -35467098 - Lx9 LINE L1 -239 7405 7311 4 1041 759 40 0 0 chr17 59805553 59805652 -35466999 + (TG)n Simple_repeat Simple_repeat 2 100 0 4 1041 2628 246 125 16 chr17 59805652 59806435 -35466216 - Lx9 LINE L1 -334 7310 6468 4 1041 238 296 47 23 chr17 59806817 59806945 -35465706 - L1_Rod LINE L1 -4012 1835 1705 4 1041 578 87 39 0 chr17 59807208 59807311 -35465340 + L1Md_F3 LINE L1 6478 6584 0 4 1041 256 342 43 43 chr17 59807315 59807431 -35465220 - PB1D10 SINE Alu 0 117 2 4 1041 23 0 0 0 chr17 59807880 59807903 -35464748 + AT_rich Low_complexity Low_complexity 1 23 0 4 1041 21 0 0 0 chr17 59809047 59809068 -35463583 + AT_rich Low_complexity Low_complexity 1 21 0 4 1041 1307 80 65 0 chr17 59809399 59809599 -35463052 - L1Md_F2 LINE L1 -2 6580 6368 4 1041 266 238 173 12 chr17 59809945 59810026 -35462625 + L2a LINE L2 3317 3410 -16 4 1041 216 97 0 0 chr17 59810402 59810433 -35462218 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1041 7042 57 8 0 chr17 59810459 59811342 -35461309 - L1Md_F2 LINE L1 -12 6570 5681 4 1041 22 35 0 0 chr17 59811819 59811848 -35460803 + AT_rich Low_complexity Low_complexity 1 29 0 4 1041 551 0 0 0 chr17 59811853 59811913 -35460738 + L1_Mm LINE L1 5527 5586 -297 4 1041 8776 15 0 0 chr17 59811913 59812909 -35459742 + L1Md_A LINE L1 5587 6582 0 4 1041 27 62 0 0 chr17 59813582 59813630 -35459021 + AT_rich Low_complexity Low_complexity 1 48 0 4 1041 582 15 0 0 chr17 59814017 59814084 -35458567 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 4 1041 1040 124 0 0 chr17 59814084 59814229 -35458422 - B1_Mus2 SINE Alu -2 145 1 4 1041 319 375 83 0 chr17 59815707 59815827 -35456824 + ID_B1 SINE B4 84 213 -11 4 1041 895 161 34 83 chr17 59815943 59816147 -35456504 - RMER6D LTR ERVK -4 716 523 4 1041 1515 223 133 58 chr17 59816159 59816295 -35456356 + RMER6C LTR ERVK 5 174 -516 4 1041 297 0 0 0 chr17 59816295 59816328 -35456323 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1041 1515 223 133 58 chr17 59816328 59816828 -35455823 + RMER6C LTR ERVK 175 689 -1 4 1041 467 95 0 0 chr17 59816888 59816951 -35455700 - L1Md_F3 LINE L1 -375 6209 6147 4 1041 2928 29 0 14 chr17 59816951 59817307 -35455344 + L1Md_F3 LINE L1 6220 6570 -14 4 1041 291 253 12 24 chr17 59817313 59817398 -35455253 + RMER6-int LTR ERVK 66 149 -3028 4 1041 7513 102 58 5 chr17 59817614 59818946 -35453705 - L1_Mus3 LINE L1 0 6638 5235 4 1041 468 0 0 0 chr17 59818946 59818998 -35453653 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 1041 7513 129 10 8 chr17 59818998 59819539 -35453112 - L1_Mus3 LINE L1 -649 5234 4694 4 1041 360 0 0 0 chr17 59819693 59819733 -35452918 + (TCTA)n Simple_repeat Simple_repeat 1 40 0 4 1041 3520 172 32 8 chr17 59819840 59820500 -35452151 - RLTR33 LTR ERVK -2 676 1 4 1041 615 293 62 5 chr17 59820738 59820930 -35451721 - Lx8 LINE L1 -137 7336 7134 4 1041 294 191 21 11 chr17 59820933 59820958 -35451693 + (CATA)n Simple_repeat Simple_repeat 4 29 0 5 1041 1154 78 0 12 chr17 59820958 59821126 -35451525 + (TATATG)n Simple_repeat Simple_repeat 4 169 0 5 1041 294 191 21 11 chr17 59821126 59821195 -35451456 + (CATA)n Simple_repeat Simple_repeat 2 70 0 5 1041 350 319 39 34 chr17 59821197 59821431 -35451220 - L1M4 LINE L1 -1914 4724 4490 5 1041 366 359 13 0 chr17 59821476 59821635 -35451016 + RSINE1 SINE B4 3 163 -2 5 1041 23 33 0 0 chr17 59821654 59821684 -35450967 + AT_rich Low_complexity Low_complexity 1 30 0 5 1041 255 337 0 12 chr17 59821709 59821793 -35450858 - B3A SINE B2 -23 175 93 5 1041 604 181 8 8 chr17 59822111 59822344 -35450307 + CT-rich Low_complexity Low_complexity 1 232 0 5 1041 340 207 7 15 chr17 59822315 59822452 -35450199 + (TCTCTG)n Simple_repeat Simple_repeat 3 138 0 5 1041 1451 265 72 3 chr17 59822777 59823163 -35449488 + MTD LTR MaLR 1 413 -6 5 1041 531 333 57 138 chr17 59823184 59823626 -35449025 - MTC LTR MaLR -9 412 7 5 1041 242 304 131 13 chr17 59823723 59823960 -35448691 - L1M4 LINE L1 -2954 3684 3420 5 1041 303 376 39 52 chr17 59823960 59824190 -35448461 - L1M4 LINE L1 -4933 1609 1383 5 1041 306 0 0 0 chr17 59825355 59825389 -35447262 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 5 1041 642 133 8 16 chr17 59825503 59825625 -35447026 + Lx2 LINE L1 6876 6996 -1 5 1041 617 38 12 0 chr17 59825918 59825998 -35446653 + (TC)n Simple_repeat Simple_repeat 2 82 0 5 1041 335 333 57 13 chr17 59826014 59826172 -35446479 - RMER15 LTR ERVL -40 535 371 5 1041 375 23 0 0 chr17 59826842 59826886 -35445765 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1041 22 35 0 0 chr17 59827166 59827195 -35445456 + AT_rich Low_complexity Low_complexity 1 29 0 5 1041 25 0 0 0 chr17 59827602 59827627 -35445024 + AT_rich Low_complexity Low_complexity 1 25 0 5 1041 414 0 0 0 chr17 59828612 59828658 -35443993 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 1041 21 0 0 0 chr17 59829077 59829098 -35443553 + AT_rich Low_complexity Low_complexity 1 21 0 5 1041 24 24 0 24 chr17 59829157 59829172 -35443479 + AT_rich Low_complexity Low_complexity 1 15 0 5 1041 1604 47 0 0 chr17 59829172 59829362 -35443289 - B2_Mm1t SINE B2 -2 191 2 5 1041 24 24 0 24 chr17 59829362 59829388 -35443263 + AT_rich Low_complexity Low_complexity 1 26 0 5 1041 1091 88 0 0 chr17 59829462 59829609 -35443042 - B1_Mus2 SINE Alu 0 147 1 5 1041 963 318 43 2 chr17 59829818 59830263 -35442388 + L1M2 LINE L1 5308 5770 -542 5 1041 919 107 0 15 chr17 59830269 59830402 -35442249 - B1_Mus1 SINE Alu -16 132 2 5 1041 234 0 0 0 chr17 59831237 59831263 -35441388 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 1041 435 38 0 0 chr17 59832007 59832060 -35440591 + (GA)n Simple_repeat Simple_repeat 2 54 0 5 1041 25 51 0 0 chr17 59832283 59832322 -35440329 + AT_rich Low_complexity Low_complexity 1 39 0 5 1041 211 125 0 24 chr17 59832653 59832694 -35439957 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 5 1041 5192 173 68 23 chr17 59832706 59833759 -35438892 - RLTR25A LTR ERVK 0 1103 3 5 1041 2323 22 0 0 chr17 59833768 59834040 -35438611 - L1Md_A LINE L1 0 6582 6311 5 1041 4738 20 0 0 chr17 59834040 59834593 -35438058 + L1_Mm LINE L1 4758 5310 -573 5 1041 229 246 30 22 chr17 59834595 59834671 -35437980 + T-rich Low_complexity Low_complexity 1 76 0 5 1041 1154 55 7 0 chr17 59834671 59834817 -35437834 - B1_Mm SINE Alu 0 147 1 5 1041 229 206 28 42 chr17 59834817 59834840 -35437811 + T-rich Low_complexity Low_complexity 1 23 0 5 1041 1842 328 73 34 chr17 59834982 59835102 -35437549 - Lx9 LINE L1 -20 7624 7514 5 1041 369 0 0 0 chr17 59835102 59835143 -35437508 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1041 1842 328 73 34 chr17 59835143 59836157 -35436494 - Lx9 LINE L1 -131 7513 6446 5 1041 32 67 0 0 chr17 59836438 59836498 -35436153 + AT_rich Low_complexity Low_complexity 1 60 0 5 1041 24 0 0 0 chr17 59838432 59838456 -35434195 + AT_rich Low_complexity Low_complexity 1 24 0 5 1041 229 347 30 20 chr17 59839130 59839230 -35433421 - MLT1L LTR MaLR -192 418 318 5 1041 2517 52 5 169 chr17 59839266 59839703 -35432948 + RLTR10B2 LTR ERVK 1 365 0 5 1041 364 169 137 8 chr17 59840602 59840733 -35431918 - Lx9 LINE L1 -83 7561 7414 5 1041 645 245 140 9 chr17 59840733 59840907 -35431744 + Lx9 LINE L1 6732 6931 -713 5 1041 514 99 50 0 chr17 59840907 59841008 -35431643 - L1_Mus4 LINE L1 0 6636 6531 5 1041 645 245 140 9 chr17 59841008 59841055 -35431596 + Lx9 LINE L1 6932 6982 -662 5 1041 426 121 0 0 chr17 59841228 59841294 -35431357 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 1041 23 54 0 0 chr17 59841743 59841780 -35430871 + AT_rich Low_complexity Low_complexity 1 37 0 5 1041 305 73 93 10 chr17 59841853 59841950 -35430701 + (TA)n Simple_repeat Simple_repeat 1 105 0 5 1041 3887 55 2 0 chr17 59842972 59843492 -35429159 - L1Md_F2 LINE L1 -512 6070 5550 5 1041 3328 75 22 9 chr17 59843495 59843954 -35428697 + L1Md_F2 LINE L1 6107 6571 -11 5 1041 1041 136 0 28 chr17 59844038 59844219 -35428432 + Lx5 LINE L1 5036 5211 -666 5 1041 6335 210 50 19 chr17 59844219 59845585 -35427066 + Lx5 LINE L1 5640 7047 -3 5 1041 216 0 0 0 chr17 59845658 59845682 -35426969 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1041 29 0 0 0 chr17 59846589 59846618 -35426033 + AT_rich Low_complexity Low_complexity 1 29 0 5 1041 307 355 50 50 chr17 59846730 59847020 -35425631 + MT2B LTR ERVL 285 529 -72 5 1041 255 211 208 128 chr17 59847080 59847205 -35425446 - MT2A LTR ERVL -398 135 1 5 1041 2136 201 107 70 chr17 59847341 59847645 -35425006 - RMER6C LTR ERVK 0 690 394 5 1041 1958 219 14 35 chr17 59847645 59848161 -35424490 - RLTR19C LTR ERVK 0 506 2 5 1041 2136 201 107 70 chr17 59848161 59848518 -35424133 - RMER6C LTR ERVK -297 393 4 5 1041 261 197 30 15 chr17 59849246 59849313 -35423338 + (TTATA)n Simple_repeat Simple_repeat 1 68 0 5 1041 743 269 42 0 chr17 59849929 59850145 -35422506 + URR1A DNA MER1_type 2 226 0 5 1041 486 257 93 6 chr17 59850572 59850744 -35421907 + Lx9 LINE L1 7413 7599 -45 5 1041 470 192 25 15 chr17 59850805 59851011 -35421640 + GA-rich Low_complexity Low_complexity 1 208 0 5 1041 473 237 36 98 chr17 59851786 59852062 -35420589 + L1M2 LINE L1 5124 5382 -761 5 1041 470 308 105 26 chr17 59852067 59852742 -35419909 + L1MA6 LINE L1 5325 6091 -209 5 1041 21 0 0 0 chr17 59852932 59852953 -35419698 + AT_rich Low_complexity Low_complexity 1 21 0 5 1041 1575 218 77 8 chr17 59853319 59853684 -35418967 - Lx5 LINE L1 0 7050 6661 5 1041 1017 103 17 0 chr17 59853923 59854098 -35418553 + (TTC)n Simple_repeat Simple_repeat 3 180 0 5 1041 273 119 0 0 chr17 59854098 59854140 -35418511 + (TCC)n Simple_repeat Simple_repeat 3 44 0 5 1041 3030 80 24 0 chr17 59854861 59855272 -35417379 + L1_Mus1 LINE L1 6147 6567 0 5 1041 21 57 0 0 chr17 59857069 59857104 -35415547 + AT_rich Low_complexity Low_complexity 1 35 0 5 1041 203 220 0 20 chr17 59858196 59858247 -35414404 + A-rich Low_complexity Low_complexity 3 52 0 5 1041 855 140 0 27 chr17 59858260 59858407 -35414244 + B2_Mm2 SINE B2 4 146 -49 5 1041 292 198 26 35 chr17 59858426 59858541 -35414110 + A-rich Low_complexity Low_complexity 5 118 0 5 1041 322 262 8 39 chr17 59859070 59859197 -35413454 - Lx3C LINE L1 0 6976 6854 5 1041 668 237 20 0 chr17 59860948 59861100 -35411551 - Lx9 LINE L1 -256 7388 7234 5 1041 240 170 43 0 chr17 59861100 59861147 -35411504 + Lx9 LINE L1 7411 7459 -185 5 1041 180 0 0 0 chr17 59861148 59861168 -35411483 + (TTA)n Simple_repeat Simple_repeat 3 22 0 5 1041 794 153 7 0 chr17 59861217 59861361 -35411290 + GA-rich Low_complexity Low_complexity 5 149 0 5 1041 378 0 0 0 chr17 59861445 59861487 -35411164 + (TC)n Simple_repeat Simple_repeat 2 43 0 5 1041 378 0 0 0 chr17 59861487 59861528 -35411123 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1041 411 207 54 0 chr17 59861529 59861640 -35411011 + Lx9 LINE L1 7523 7639 -5 5 1041 279 0 0 0 chr17 59862665 59862696 -35409955 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1041 426 175 0 0 chr17 59862696 59862776 -35409875 + (TA)n Simple_repeat Simple_repeat 1 80 0 5 1041 23 0 0 0 chr17 59862811 59862834 -35409817 + AT_rich Low_complexity Low_complexity 1 23 0 5 1041 289 326 14 21 chr17 59863364 59863505 -35409146 - Lx9 LINE L1 -1683 5961 5822 5 1041 504 0 0 0 chr17 59863511 59863567 -35409084 + (TA)n Simple_repeat Simple_repeat 1 56 0 5 1041 1083 112 35 6 chr17 59863578 59863749 -35408902 - B2_Mm2 SINE B2 -15 180 5 5 1041 180 111 0 0 chr17 59863751 59863778 -35408873 + (TA)n Simple_repeat Simple_repeat 1 27 0 5 1041 1322 295 30 35 chr17 59863778 59864315 -35408336 + Lx9 LINE L1 6894 7427 -217 5 1041 360 0 0 0 chr17 59864360 59864400 -35408251 + (TAA)n Simple_repeat Simple_repeat 2 41 0 5 1041 3520 133 20 27 chr17 59864478 59865079 -35407572 + Lx3C LINE L1 5869 6465 -511 5 1041 1952 158 13 21 chr17 59865079 59865455 -35407196 + Lx3C LINE L1 6594 6966 -10 5 1041 24 32 0 0 chr17 59865457 59865488 -35407163 + AT_rich Low_complexity Low_complexity 1 31 0 5 1041 258 32 0 0 chr17 59866695 59866726 -35405925 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 1041 24 0 0 0 chr17 59867012 59867036 -35405615 + AT_rich Low_complexity Low_complexity 1 24 0 5 1041 24 67 0 0 chr17 59867180 59867225 -35405426 + AT_rich Low_complexity Low_complexity 1 45 0 5 1041 180 179 0 0 chr17 59867814 59867853 -35404798 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 1041 732 329 145 11 chr17 59868163 59868714 -35403937 + Lx8 LINE L1 6642 7266 -207 5 1041 1057 96 7 7 chr17 59868749 59868896 -35403755 - B1_Mus1 SINE Alu 0 148 2 5 1041 1964 68 0 0 chr17 59869090 59869341 -35403310 - L1_Mm LINE L1 -733 5150 4900 5 1041 2096 53 0 0 chr17 59869341 59869604 -35403047 + L1Md_F3 LINE L1 6308 6570 -14 5 1041 503 299 7 0 chr17 59869659 59869796 -35402855 - ORR1D2-int LTR MaLR -1232 138 1 5 1041 915 282 81 49 chr17 59869805 59870152 -35402499 - ORR1D2 LTR MaLR -12 358 1 5 1041 591 263 69 55 chr17 59870206 59870423 -35402228 + ORR1D1 LTR MaLR 8 227 -147 5 1041 386 309 68 11 chr17 59870423 59870600 -35402051 + Lx7 LINE L1 7136 7322 -374 5 1041 21 0 0 0 chr17 59871299 59871320 -35401331 + AT_rich Low_complexity Low_complexity 1 21 0 5 1041 4241 33 0 19 chr17 59871373 59871898 -35400753 + L1Md_F3 LINE L1 6070 6584 0 6 1041 602 34 0 11 chr17 59871980 59872069 -35400582 - L1Md_F2 LINE L1 -1 6581 6494 6 1041 933 95 89 0 chr17 59872067 59872225 -35400426 + L1_Mus3 LINE L1 6465 6636 -2 6 1041 3903 55 0 2 chr17 59872840 59873329 -35399322 - L1Md_F3 LINE L1 -3 6581 6094 6 1041 2723 50 3 0 chr17 59873329 59873664 -35398987 + L1Md_F3 LINE L1 5762 6097 -487 6 1041 975 294 82 7 chr17 59874188 59874493 -35398158 + MTD LTR MaLR 87 414 -5 6 1041 343 77 0 0 chr17 59874549 59874601 -35398050 - B1_Mm SINE Alu -1 146 95 6 1041 1218 109 33 0 chr17 59874647 59874830 -35397821 - B2_Mm1t SINE B2 -2 191 3 6 1041 3934 78 20 9 chr17 59875098 59875657 -35396994 - L1Md_F2 LINE L1 0 6582 6018 6 1041 327 249 14 247 chr17 59875816 59876035 -35396616 - MT2A LTR ERVL -338 195 28 6 1041 959 297 79 31 chr17 59876538 59876784 -35395867 + Lx9 LINE L1 6576 6829 -815 6 1041 981 116 13 20 chr17 59876784 59876933 -35395718 + B1_Mus1 SINE Alu 1 148 0 6 1041 959 297 79 31 chr17 59876933 59877103 -35395548 + Lx9 LINE L1 6830 7012 -632 6 1041 657 280 16 5 chr17 59877098 59877285 -35395366 + Lx9 LINE L1 7263 7451 -193 6 1041 3724 25 0 2 chr17 59877288 59877726 -35394925 + L1Md_F3 LINE L1 6137 6573 -11 6 1041 1058 88 0 13 chr17 59877745 59877894 -35394757 + B1_Mus1 SINE Alu 2 148 0 6 1041 204 83 0 53 chr17 59877895 59877933 -35394718 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 6 1041 333 0 0 0 chr17 59877945 59877982 -35394669 + (GA)n Simple_repeat Simple_repeat 2 38 0 6 1041 425 344 22 139 chr17 59878135 59878358 -35394293 + B3A SINE B2 3 199 -17 6 1041 28 0 0 0 chr17 59878554 59878582 -35394069 + AT_rich Low_complexity Low_complexity 1 28 0 6 1041 249 83 0 0 chr17 59879028 59879064 -35393587 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 6 1041 6811 147 17 5 chr17 59879571 59880760 -35391891 - Lx3C LINE L1 -1 6975 5773 6 1041 7369 105 9 1 chr17 59881102 59882889 -35389762 - L1_Mus1 LINE L1 0 6567 4767 6 1041 2430 116 0 3 chr17 59882886 59883248 -35389403 + L1_Mus1 LINE L1 4401 4761 -1122 6 1041 21 36 0 0 chr17 59884688 59884716 -35387935 + AT_rich Low_complexity Low_complexity 1 28 0 6 1041 26 0 0 0 chr17 59885238 59885264 -35387387 + AT_rich Low_complexity Low_complexity 1 26 0 6 1041 21 0 0 0 chr17 59886035 59886056 -35386595 + AT_rich Low_complexity Low_complexity 1 21 0 6 1041 3506 70 4 2 chr17 59886116 59886589 -35386062 - L1_Mus1 LINE L1 -1 6566 6093 6 1041 4193 109 2 19 chr17 59886589 59887680 -35384971 + L1_Mus1 LINE L1 5123 6112 -455 6 1041 3054 81 2 0 chr17 59888031 59888426 -35384225 - MTA_Mm LTR MaLR 0 396 1 6 1041 1900 326 112 35 chr17 59888626 59888961 -35383690 + Lx8 LINE L1 6185 6533 -940 6 1041 279 0 0 0 chr17 59888961 59888992 -35383659 + (TAA)n Simple_repeat Simple_repeat 1 31 0 6 1041 1900 326 112 35 chr17 59888992 59889227 -35383424 + Lx8 LINE L1 6534 6795 -678 6 1041 929 179 33 16 chr17 59889227 59889409 -35383242 + B2_Mm2 SINE B2 2 186 -9 6 1041 1900 326 112 35 chr17 59889409 59889966 -35382685 + Lx8 LINE L1 6796 7400 -73 6 1041 395 261 34 92 chr17 59890006 59890213 -35382438 + B3A SINE B2 2 196 -2 6 1041 39 22 0 0 chr17 59890217 59890263 -35382388 + AT_rich Low_complexity Low_complexity 1 46 0 6 1041 550 296 53 19 chr17 59890263 59890470 -35382181 - B3 SINE B2 0 216 3 6 1041 21 36 0 0 chr17 59890808 59890836 -35381815 + AT_rich Low_complexity Low_complexity 1 28 0 6 1041 405 0 0 0 chr17 59891312 59891357 -35381294 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1041 459 0 0 0 chr17 59891662 59891713 -35380938 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1041 792 298 82 17 chr17 59891934 59892350 -35380301 + L1MC1 LINE L1 5741 6183 -150 6 1041 339 25 0 0 chr17 59892591 59892631 -35380020 + (TC)n Simple_repeat Simple_repeat 1 40 0 6 1041 450 94 0 0 chr17 59892631 59892694 -35379957 + (CA)n Simple_repeat Simple_repeat 1 64 0 6 1041 315 0 0 0 chr17 59893399 59893434 -35379217 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 6 1041 1065 108 0 0 chr17 59893437 59893585 -35379066 + B1_Mus1 SINE Alu 1 148 0 6 1041 328 219 36 12 chr17 59893611 59893694 -35378957 - RLTR22_Mur LTR ERVK 0 1322 1238 6 1041 299 250 0 150 chr17 59893783 59893863 -35378788 - RLTR22_Mur LTR ERVK -257 1065 998 6 1041 7285 55 12 5 chr17 59893881 59894857 -35377794 - L1Md_F2 LINE L1 -22 6560 5538 6 1041 1031 51 0 7 chr17 59894864 59895003 -35377648 + (CA)n Simple_repeat Simple_repeat 1 138 0 6 1041 556 199 59 144 chr17 59895004 59895268 -35377383 - RLTR22_Mur LTR ERVK -499 1349 1164 6 1041 1444 266 67 133 chr17 59895326 59896216 -35376435 - RLTR22_Mur LTR ERVK -1016 832 1 6 1041 29 0 0 0 chr17 59896310 59896339 -35376312 + AT_rich Low_complexity Low_complexity 1 29 0 6 1041 1177 48 0 0 chr17 59896339 59896484 -35376167 - B1_Mm SINE Alu 0 147 3 6 1041 1345 263 52 66 chr17 59896898 59897607 -35375044 - Lx9 LINE L1 -1 7643 6945 6 1041 275 358 22 22 chr17 59897830 59897967 -35374684 + MER57C2 LTR ERV1 72 208 -226 6 1041 23 33 0 0 chr17 59898650 59898680 -35373971 + AT_rich Low_complexity Low_complexity 1 30 0 6 1041 463 294 92 27 chr17 59898699 59898882 -35373769 + B3A SINE B2 22 216 0 6 1042 1207 261 57 11 chr17 59900431 59900780 -35371871 - ORR1D2 LTR MaLR -1 369 5 6 1042 495 0 0 0 chr17 59901006 59901061 -35371590 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1042 2510 169 120 44 chr17 59902765 59903333 -35369318 - RMER19C LTR ERVK 0 611 1 6 1042 269 342 152 8 chr17 59903427 59903545 -35369106 + RSINE1 SINE B4 1 135 -30 6 1042 26 0 0 0 chr17 59903699 59903725 -35368926 + AT_rich Low_complexity Low_complexity 1 26 0 6 1042 234 81 0 0 chr17 59905249 59905286 -35367365 + (CAAAC)n Simple_repeat Simple_repeat 2 38 0 6 1042 952 190 101 10 chr17 59905792 59905999 -35366652 - URR1A DNA MER1_type 0 226 1 6 1042 22 0 0 0 chr17 59906335 59906357 -35366294 + AT_rich Low_complexity Low_complexity 1 22 0 6 1042 195 42 0 0 chr17 59906722 59906746 -35365905 + (TTC)n Simple_repeat Simple_repeat 1 24 0 6 1042 189 0 0 0 chr17 59907611 59907632 -35365019 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 6 1042 504 0 0 0 chr17 59907887 59907943 -35364708 + (TC)n Simple_repeat Simple_repeat 2 57 0 6 1042 198 231 0 0 chr17 59908147 59908186 -35364465 - MER5B DNA MER1_type -5 173 135 6 1042 204 65 64 21 chr17 59908186 59908233 -35364418 + (CAAA)n Simple_repeat Simple_repeat 4 52 0 6 1042 189 328 45 0 chr17 59908263 59908330 -35364321 - MER5B DNA MER1_type -80 98 29 6 1042 306 0 0 0 chr17 59908843 59908877 -35363774 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 1042 4823 162 10 15 chr17 59909561 59910454 -35362197 + Lx2 LINE L1 6108 6996 -1 6 1042 623 320 111 40 chr17 59910571 59910896 -35361755 - ORR1E LTR MaLR -6 353 6 6 1042 312 250 0 0 chr17 59911031 59911207 -35361444 + (TG)n Simple_repeat Simple_repeat 2 177 0 6 1042 32 81 0 0 chr17 59911962 59912036 -35360615 + AT_rich Low_complexity Low_complexity 1 74 0 6 1042 21 36 0 0 chr17 59912082 59912110 -35360541 + AT_rich Low_complexity Low_complexity 1 28 0 6 1042 213 39 0 0 chr17 59912225 59912251 -35360400 + (TTTTG)n Simple_repeat Simple_repeat 4 29 0 6 1042 1112 88 0 0 chr17 59912251 59912398 -35360253 - B1_Mus1 SINE Alu 0 148 2 6 1042 422 36 18 0 chr17 59912755 59912811 -35359840 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 1042 423 0 0 0 chr17 59913124 59913171 -35359480 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 6 1042 186 43 0 0 chr17 59913277 59913300 -35359351 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 6 1042 33 43 0 0 chr17 59914281 59914328 -35358323 + AT_rich Low_complexity Low_complexity 1 47 0 6 1042 24 0 0 0 chr17 59914576 59914600 -35358051 + AT_rich Low_complexity Low_complexity 1 24 0 6 1042 767 150 0 0 chr17 59915378 59915498 -35357153 + MTC LTR MaLR 1 120 -301 6 1042 33762 86 6 11 chr17 59915512 59921477 -35351174 - L1Md_F2 LINE L1 -1 6581 654 6 1042 836 210 75 0 chr17 59921479 59921679 -35350972 + MTC LTR MaLR 110 324 -97 6 1042 2195 12 23 0 chr17 59921750 59922009 -35350642 - MT2_Mm LTR ERVL 0 493 229 6 1042 1267 72 77 0 chr17 59922020 59922201 -35350450 - L1_Mm LINE L1 -306 5577 5383 6 1042 835 64 82 0 chr17 59922196 59922306 -35350345 - L1_Mus1 LINE L1 -315 6252 6134 6 1042 2693 123 11 7 chr17 59922300 59922741 -35349910 - L1_Mm LINE L1 -883 5000 4558 6 1042 7222 84 10 1 chr17 59922738 59923699 -35348952 + L1_Mus2 LINE L1 5597 6566 0 6 1042 18452 187 59 49 chr17 59923697 59926605 -35346046 - L1_Mur1 LINE L1 -101 5785 3001 6 1042 1054 120 11 0 chr17 59926605 59926780 -35345871 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 6 1042 18452 187 59 49 chr17 59926780 59928411 -35344240 - L1_Mur1 LINE L1 -2886 3000 1203 6 1042 1753 200 28 61 chr17 59928404 59928830 -35343821 - L1VL4 LINE L1 -5513 789 378 6 1042 633 307 85 14 chr17 59928969 59929263 -35343388 + L1MB5 LINE L1 5829 6143 -31 6 1042 420 158 0 0 chr17 59929758 59929834 -35342817 + (TG)n Simple_repeat Simple_repeat 1 76 0 6 1042 2994 93 18 11 chr17 59929905 59930350 -35342301 + Lx3_Mus LINE L1 6559 7006 -3 6 1042 669 25 0 0 chr17 59930408 59930487 -35342164 + (TTTC)n Simple_repeat Simple_repeat 3 81 0 6 1042 208 195 24 35 chr17 59931147 59931232 -35341419 + T-rich Low_complexity Low_complexity 3 86 0 6 1042 633 249 263 42 chr17 59931311 59931668 -35340983 + Lx8 LINE L1 6385 6820 -653 6 1042 30 45 0 0 chr17 59933251 59933295 -35339356 + AT_rich Low_complexity Low_complexity 1 44 0 6 1042 441 0 0 0 chr17 59933557 59933606 -35339045 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1042 325 326 63 37 chr17 59934641 59934832 -35337819 + MLT1H1 LTR MaLR 245 440 -115 6 1042 684 102 0 45 chr17 59935298 59935431 -35337220 - Lx LINE L1 -6 6648 6522 6 1042 10900 172 4 59 chr17 59935439 59935995 -35336656 - L1_Mm LINE L1 -54 5829 5288 6 1042 971 157 0 0 chr17 59935995 59936142 -35336509 - B1_Mus1 SINE Alu 0 148 2 6 1042 10900 172 4 59 chr17 59936142 59936155 -35336496 - L1_Mm LINE L1 -596 5287 5279 6 1042 894 151 26 31 chr17 59936155 59936346 -35336305 - Lx LINE L1 -17 6637 6448 6 1042 10900 172 4 59 chr17 59936346 59936895 -35335756 - L1_Mm LINE L1 -605 5278 4738 6 1042 180 0 0 0 chr17 59936895 59936915 -35335736 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 6 1042 10900 172 4 59 chr17 59936915 59938065 -35334586 - L1_Mm LINE L1 -1146 4737 3687 6 1042 232 336 55 46 chr17 59938553 59938662 -35333989 - MLT1H1 LTR MaLR -355 200 91 6 1042 328 333 33 70 chr17 59938836 59938861 -35333790 + CYRA11_Mm Unknown Y-chromosome 147 376 -238 6 1042 1028 230 14 5 chr17 59938861 59939075 -35333576 - URR1A DNA MER1_type 0 226 11 6 1042 2920 138 18 6 chr17 59939244 59939746 -35332905 - MusHAL1 LINE L1 -954 1758 1251 6 1042 3918 95 4 2 chr17 59939766 59940313 -35332338 - L1_Mus3 LINE L1 0 6638 6091 7 1042 3073 98 47 0 chr17 59940313 59940892 -35331759 + L1_Mus3 LINE L1 5442 6054 -584 7 1042 1455 131 21 0 chr17 59940885 59941121 -35331530 - L1_Mur1 LINE L1 -3414 2472 2232 7 1042 489 330 26 36 chr17 59941221 59941413 -35331238 - B3A SINE B2 -3 195 6 7 1042 375 60 0 0 chr17 59942425 59942475 -35330176 + (GA)n Simple_repeat Simple_repeat 1 50 0 7 1042 2612 48 0 0 chr17 59942957 59943273 -35329378 + L1Md_F3 LINE L1 5271 5586 -297 7 1042 8177 30 9 3 chr17 59943273 59944263 -35328388 + L1Md_F3 LINE L1 5587 6582 -2 7 1042 450 0 0 0 chr17 59944960 59945010 -35327641 + (TC)n Simple_repeat Simple_repeat 1 50 0 7 1042 372 273 0 0 chr17 59945027 59945170 -35327481 + (CA)n Simple_repeat Simple_repeat 2 144 0 7 1042 645 236 0 0 chr17 59945155 59945329 -35327322 + (TA)n Simple_repeat Simple_repeat 2 175 0 7 1042 620 291 50 20 chr17 59945339 59945539 -35327112 + ORR1D1 LTR MaLR 24 229 -145 7 1042 387 157 63 32 chr17 59945973 59946131 -35326520 + (TATATG)n Simple_repeat Simple_repeat 6 168 0 7 1042 454 118 23 23 chr17 59946677 59946764 -35325887 - ORR1B1 LTR MaLR -267 127 41 7 1042 288 174 74 50 chr17 59946848 59946969 -35325682 - Lx9 LINE L1 -18 7626 7503 7 1042 459 0 0 0 chr17 59947728 59947779 -35324872 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1042 495 0 0 0 chr17 59947779 59947833 -35324818 + (TA)n Simple_repeat Simple_repeat 1 55 0 7 1042 337 312 56 35 chr17 59948704 59948847 -35323804 - RLTR14 LTR ERV1 -2 380 235 7 1042 226 256 30 24 chr17 59949422 59949586 -35323065 + (TTATA)n Simple_repeat Simple_repeat 4 168 0 7 1042 401 370 82 0 chr17 59949848 59950032 -35322619 - ID_B1 SINE B4 -8 216 18 7 1042 234 310 89 28 chr17 59950204 59950383 -35322268 + L1MC1 LINE L1 6011 6200 -133 7 1042 2591 237 99 43 chr17 59953167 59954118 -35318533 + Lx7 LINE L1 4987 5991 -1705 7 1042 606 82 0 0 chr17 59954119 59954204 -35318447 + (TA)n Simple_repeat Simple_repeat 1 85 0 7 1042 2244 263 28 2 chr17 59954216 59954749 -35317902 + Lx7 LINE L1 6197 6743 -953 7 1042 234 91 0 0 chr17 59954774 59954807 -35317844 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 1042 301 298 84 14 chr17 59954809 59954952 -35317699 + Lx7 LINE L1 6196 6348 -1348 7 1042 3869 161 48 11 chr17 59954952 59955685 -35316966 + Lx3C LINE L1 6196 6961 -15 7 1042 474 18 0 0 chr17 59955685 59955740 -35316911 + (TAAA)n Simple_repeat Simple_repeat 1 55 0 7 1042 3869 161 48 11 chr17 59955740 59955759 -35316892 + Lx3C LINE L1 6962 6976 0 7 1042 1796 269 96 7 chr17 59955794 59956337 -35316314 + Lx7 LINE L1 6773 7363 -333 7 1042 474 33 0 0 chr17 59956352 59956412 -35316239 + (TG)n Simple_repeat Simple_repeat 2 61 0 7 1042 222 155 40 40 chr17 59957957 59958031 -35314620 + (TTAA)n Simple_repeat Simple_repeat 3 76 0 7 1042 2437 89 3 0 chr17 59958068 59958405 -35314246 - L1_Mus1 LINE L1 0 6567 6230 7 1042 552 56 0 0 chr17 59958751 59958823 -35313828 + (CA)n Simple_repeat Simple_repeat 2 73 0 7 1042 491 0 17 0 chr17 59958823 59958881 -35313770 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 7 1042 192 179 0 0 chr17 59958938 59958977 -35313674 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 1042 263 263 26 13 chr17 59961401 59961478 -35311173 + RSINE1 SINE B4 3 80 -85 7 1042 2238 72 0 22 chr17 59962809 59963122 -35309529 + L1Md_F2 LINE L1 6266 6571 -11 7 1042 966 141 0 22 chr17 59963329 59963510 -35309141 + Lx LINE L1 6476 6652 -2 7 1042 8035 165 31 8 chr17 59963555 59966057 -35306594 + Lx3C LINE L1 4430 6976 0 7 1042 22 0 0 0 chr17 59966112 59966134 -35306517 + AT_rich Low_complexity Low_complexity 1 22 0 7 1042 513 210 144 70 chr17 59967925 59968140 -35304511 + RMER1C Other Other 1110 1340 -2 7 1042 275 364 59 72 chr17 59968925 59969147 -35303504 + MLT1A1 LTR MaLR 190 408 0 7 1042 447 19 0 0 chr17 59969858 59969910 -35302741 + (CA)n Simple_repeat Simple_repeat 1 52 0 7 1042 271 405 0 9 chr17 59970019 59970131 -35302520 - PB1D10 SINE Alu 0 117 7 7 1042 2042 129 38 0 chr17 59970182 59970523 -35302128 + Lx2 LINE L1 6643 6996 -1 7 1042 445 184 18 0 chr17 59970629 59970738 -35301913 + (TAGA)n Simple_repeat Simple_repeat 4 114 0 7 1042 580 238 23 51 chr17 59970738 59970915 -35301736 - Lx9 LINE L1 -171 7473 7302 7 1042 2060 280 98 42 chr17 59971156 59972097 -35300554 - Lx9 LINE L1 -7 7637 6645 7 1042 349 302 69 0 chr17 59972140 59972152 -35300499 - B1_Mur3 SINE Alu -20 129 118 7 1042 501 17 0 0 chr17 59972152 59972210 -35300441 + (CA)n Simple_repeat Simple_repeat 2 59 0 7 1042 369 294 69 0 chr17 59972210 59972313 -35300338 - B1_Mur2 SINE Alu -32 117 6 7 1042 984 152 0 0 chr17 59972802 59973013 -35299638 + (CA)n Simple_repeat Simple_repeat 1 211 0 7 1042 369 0 0 0 chr17 59973030 59973071 -35299580 + (GA)n Simple_repeat Simple_repeat 2 42 0 7 1042 223 336 37 28 chr17 59973394 59973501 -35299150 - B1F1 SINE Alu -37 112 5 7 1042 727 191 128 11 chr17 59973540 59973720 -35298931 - Lx5 LINE L1 -1232 5818 5618 7 1042 441 0 0 0 chr17 59974074 59974123 -35298528 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1042 242 95 0 23 chr17 59974123 59974165 -35298486 + (TA)n Simple_repeat Simple_repeat 2 43 0 7 1042 2194 187 35 2 chr17 59974255 59974651 -35298000 + MTC LTR MaLR 13 421 0 7 1042 24 0 0 0 chr17 59974843 59974867 -35297784 + AT_rich Low_complexity Low_complexity 1 24 0 7 1042 400 339 53 68 chr17 59975171 59975377 -35297274 - Lx8 LINE L1 -1060 6413 6211 7 1042 988 292 80 28 chr17 59975611 59975963 -35296688 + ORR1D2 LTR MaLR 1 370 0 7 1042 201 244 22 0 chr17 59976005 59976050 -35296601 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1042 180 0 0 0 chr17 59976050 59976070 -35296581 + (TTG)n Simple_repeat Simple_repeat 1 20 0 7 1042 1877 232 11 29 chr17 59976108 59976551 -35296100 + ORR1D2-int LTR MaLR 95 529 -841 7 1042 434 261 0 0 chr17 59976549 59976660 -35295991 + ORR1D2-int LTR MaLR 1260 1370 0 7 1042 727 268 90 9 chr17 59976660 59976871 -35295780 + ORR1D2 LTR MaLR 1 228 -142 7 1042 318 324 95 43 chr17 59977083 59977315 -35295336 - HERVL74-int LTR ERVL -590 5095 4852 7 1042 2806 69 3 0 chr17 59977514 59977892 -35294759 - L1_Mur1 LINE L1 -1721 4165 3787 7 1042 3943 91 7 24 chr17 59977894 59977956 -35294695 + Lx3_Mus LINE L1 5321 5382 -504 7 1042 2742 34 0 18 chr17 59977956 59978289 -35294362 + IAPLTR2b LTR ERVK 1 327 0 7 1042 3988 93 8 34 chr17 59978289 59979131 -35293520 + Lx3_Mus LINE L1 5383 6190 -819 7 1042 329 298 68 47 chr17 59979271 59979461 -35293190 - HERVL74-int LTR ERVL -2506 3179 2986 7 1042 827 270 20 43 chr17 59979538 59979840 -35292811 + Lx6 LINE L1 5863 6157 -1303 7 1042 2161 243 111 39 chr17 59979837 59980501 -35292150 + Lx6 LINE L1 6749 7460 0 7 1042 287 393 17 0 chr17 59980531 59980648 -35292003 - HERVL74-int LTR ERVL -484 3072 2954 7 1042 999 78 35 0 chr17 59981588 59981730 -35290921 + B1_Mus1 SINE Alu 2 148 0 7 1042 233 355 45 9 chr17 59981878 59981901 -35290750 + ID_B1 SINE B4 55 169 -55 7 1042 284 318 34 0 chr17 59981901 59981989 -35290662 + B1F2 SINE Alu 1 91 -58 7 1042 180 0 0 0 chr17 59982981 59983001 -35289650 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 7 1042 287 288 40 48 chr17 59983607 59983731 -35288920 - B3A SINE B2 0 198 76 7 1042 4364 133 42 16 chr17 59983840 59984572 -35288079 - Lx2 LINE L1 -1 6996 6246 7 1042 770 274 24 24 chr17 59985390 59985603 -35287048 + B3 SINE B2 4 216 0 7 1042 3181 63 5 0 chr17 59986361 59986755 -35285896 + MTA_Mm LTR MaLR 1 396 0 7 1042 23 33 0 0 chr17 59988682 59988712 -35283939 + AT_rich Low_complexity Low_complexity 1 30 0 7 1042 21 0 0 0 chr17 59988935 59988956 -35283695 + AT_rich Low_complexity Low_complexity 1 21 0 7 1042 378 161 0 0 chr17 59989830 59989923 -35282728 + T-rich Low_complexity Low_complexity 1 93 0 7 1042 816 38 9 0 chr17 59989925 59990030 -35282621 - B1_Mm SINE Alu 0 147 42 7 1042 415 350 16 60 chr17 59990231 59990581 -35282070 - Lx7 LINE L1 -633 6840 6500 7 1042 26 0 0 0 chr17 59990625 59990651 -35282000 + AT_rich Low_complexity Low_complexity 1 26 0 7 1042 340 299 214 22 chr17 59990672 59991209 -35281442 + L1_Mur3 LINE L1 2548 3187 -2693 7 1042 746 287 37 49 chr17 59991233 59991559 -35281092 - RLTR15 LTR ERVK -30 329 8 7 1042 605 226 21 42 chr17 59991565 59991754 -35280897 - MYSERV-int LTR ERVK -6 6544 6360 7 1042 2166 174 47 20 chr17 59991755 59992207 -35280444 - MYSERV6-int LTR ERVK -259 8700 8237 7 1042 290 67 0 22 chr17 59992211 59992257 -35280394 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 7 1042 2944 175 36 38 chr17 59992316 59992891 -35279760 - Lx LINE L1 0 6654 6081 7 1042 1287 212 47 40 chr17 59992894 59993342 -35279309 - MYSERV6-int LTR ERVK -732 8227 7777 7 1042 297 340 20 60 chr17 59993342 59993492 -35279159 - RMER4A LTR ERVK -19 447 304 7 1042 3443 137 62 42 chr17 59994021 59994773 -35277878 - RMER17A LTR ERVK 0 751 1 7 1042 2880 259 52 56 chr17 59994963 59996129 -35276522 - MYSERV-int LTR ERVK -1559 4991 3831 7 1042 803 266 32 32 chr17 59997393 59997673 -35274978 - RLTR15 LTR ERVK -79 280 1 7 1042 289 218 70 58 chr17 59997673 59997829 -35274822 + L1_Mur3 LINE L1 3182 3339 -2538 7 1042 11835 14 0 0 chr17 59997929 60000000 -35272651 - L1Md_T LINE L1 0 6582 4512 7 1042 25936 41 0 0 chr17 60000000 60004380 -35268271 - L1Md_Gf LINE L1 -1372 4514 38 1 1042 26 0 0 0 chr17 60004643 60004669 -35267982 + AT_rich Low_complexity Low_complexity 1 26 0 2 1042 22 35 0 0 chr17 60004971 60005000 -35267651 + AT_rich Low_complexity Low_complexity 1 29 0 3 1042 26 50 0 0 chr17 60005730 60005770 -35266881 + AT_rich Low_complexity Low_complexity 1 40 0 4 1042 345 47 0 0 chr17 60005863 60005906 -35266745 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 1042 28 71 0 0 chr17 60005932 60005988 -35266663 + AT_rich Low_complexity Low_complexity 1 56 0 6 1042 217 310 0 29 chr17 60006171 60006274 -35266377 + GA-rich Low_complexity Low_complexity 3 102 0 7 1042 360 241 61 24 chr17 60006375 60006513 -35266138 + MLT1E2 LTR MaLR 411 621 -6 8 1042 204 222 127 0 chr17 60006679 60006742 -35265909 + L3 LINE CR1 3554 3624 -865 9 1042 1175 104 11 21 chr17 60006993 60007180 -35265471 - B2_Mm1a SINE B2 -2 191 7 1 1042 1291 87 87 0 chr17 60007348 60007544 -35265107 - L1Md_F2 LINE L1 -1 6581 6369 1 1042 18451 78 1 1 chr17 60008452 60010950 -35261701 + L1_Mm LINE L1 2665 5161 -722 1 1042 2140 54 4 0 chr17 60010944 60011222 -35261429 - L1_Mm LINE L1 -1833 4050 3772 1 1042 6471 48 0 9 chr17 60011222 60012039 -35260612 + L1Md_F3 LINE L1 5761 6570 -14 1 1042 287 231 0 0 chr17 60012493 60012558 -35260093 - L1MA8 LINE L1 -24 6267 6203 1 1042 310 105 91 23 chr17 60014167 60014255 -35258396 + CT-rich Low_complexity Low_complexity 2 95 0 1 1042 323 321 129 14 chr17 60014258 60014397 -35258254 - HAL1-3A_ME LINE L1 -419 2439 2285 1 1042 366 80 0 0 chr17 60014407 60014457 -35258194 + (TCCCC)n Simple_repeat Simple_repeat 4 53 0 1 1042 468 0 0 0 chr17 60014451 60014503 -35258148 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 1042 3489 222 90 14 chr17 60014503 60015307 -35257344 - Lx5 LINE L1 -4 7046 6182 2 1042 543 235 38 0 chr17 60015321 60015453 -35257198 + L1_Mur3 LINE L1 5333 5469 -411 2 1042 346 182 15 0 chr17 60015457 60015523 -35257128 + Lx LINE L1 6300 6366 -684 2 1042 192 135 0 0 chr17 60015543 60015580 -35257071 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1042 650 166 48 0 chr17 60015691 60015836 -35256815 + Lx LINE L1 6502 6653 -1 2 1042 21 36 0 0 chr17 60015941 60015969 -35256682 + AT_rich Low_complexity Low_complexity 1 28 0 2 1042 564 84 0 0 chr17 60016020 60016103 -35256548 + (TG)n Simple_repeat Simple_repeat 1 83 0 2 1042 195 114 0 0 chr17 60016239 60016274 -35256377 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1042 423 0 0 0 chr17 60017038 60017085 -35255566 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1042 450 0 0 0 chr17 60017453 60017503 -35255148 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1042 21 57 0 0 chr17 60018458 60018493 -35254158 + AT_rich Low_complexity Low_complexity 1 35 0 2 1042 447 63 0 0 chr17 60018604 60018667 -35253984 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 1042 195 69 0 0 chr17 60018874 60018903 -35253748 + (TTA)n Simple_repeat Simple_repeat 2 30 0 3 1042 459 0 0 0 chr17 60019050 60019101 -35253550 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 1042 21 71 0 0 chr17 60019338 60019380 -35253271 + AT_rich Low_complexity Low_complexity 1 42 0 3 1042 180 0 0 0 chr17 60020462 60020482 -35252169 + (TA)n Simple_repeat Simple_repeat 1 20 0 3 1042 27 0 0 0 chr17 60022421 60022448 -35250203 + AT_rich Low_complexity Low_complexity 1 27 0 3 1042 475 339 18 0 chr17 60022526 60022694 -35249957 - LFSINE_Vert SINE SINE -202 257 87 3 1042 510 79 0 0 chr17 60022882 60022958 -35249693 + (TG)n Simple_repeat Simple_repeat 1 76 0 3 1042 243 0 0 0 chr17 60023181 60023208 -35249443 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 3 1042 3583 272 65 33 chr17 60023208 60024361 -35248290 + Lx7 LINE L1 6117 7306 -390 3 1042 2113 222 10 38 chr17 60024460 60024965 -35247686 - Lx2B LINE L1 -11 6989 6499 4 1042 3185 156 38 2 chr17 60025098 60025630 -35247021 - Lx4A LINE L1 -220 6838 6288 4 1042 4139 141 4 13 chr17 60025628 60026338 -35246313 + L1_Mur2 LINE L1 4431 5134 -743 4 1042 787 279 50 23 chr17 60026389 60026690 -35245961 + Lx7 LINE L1 7388 7696 0 3 1042 5313 209 37 32 chr17 60026723 60027892 -35244759 + Lx5 LINE L1 5877 7050 0 4 1042 703 306 48 64 chr17 60027938 60028423 -35244228 - L1_Rod LINE L1 -1724 4123 3634 4 1042 1059 94 0 0 chr17 60028423 60028594 -35244057 + (TC)n Simple_repeat Simple_repeat 2 172 0 4 1042 613 305 49 65 chr17 60028594 60028685 -35243966 - L1_Rod LINE L1 -2247 3633 3554 4 1042 4475 23 9 0 chr17 60029091 60029615 -35243036 + L1Md_F3 LINE L1 6056 6584 0 4 1042 690 275 129 63 chr17 60030142 60030491 -35242160 + RMER13A LTR ERVK 95 466 -394 4 1043 4166 278 30 67 chr17 60031132 60033345 -35239306 + L1_Rod LINE L1 900 3034 -2813 4 1043 709 323 91 19 chr17 60033460 60033823 -35238828 + Lx9 LINE L1 6460 6848 -796 4 1043 299 167 75 15 chr17 60034320 60034387 -35238264 - L1_Rod LINE L1 -3128 2719 2649 5 1043 369 366 62 11 chr17 60034451 60034628 -35238023 + MLT1B LTR MaLR 171 356 -34 5 1043 219 36 0 0 chr17 60034735 60034763 -35237888 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 5 1043 242 333 0 0 chr17 60034946 60035012 -35237639 + ID4_ SINE ID 2 67 -16 5 1043 300 278 58 36 chr17 60037418 60037556 -35235095 - MIR3 SINE MIR -30 178 38 5 1043 21 36 0 0 chr17 60038381 60038409 -35234242 + AT_rich Low_complexity Low_complexity 1 28 0 5 1043 2179 193 149 52 chr17 60038528 60039157 -35233494 + RMER6C LTR ERVK 1 690 0 5 1043 455 374 42 19 chr17 60039160 60039375 -35233276 + B4A SINE B4 53 272 -20 5 1043 941 59 8 0 chr17 60039735 60039853 -35232798 - L1Md_F2 LINE L1 -443 6139 6021 5 1043 2977 74 24 7 chr17 60039853 60040262 -35232389 + L1Md_F2 LINE L1 6155 6570 -12 5 1043 201 167 0 23 chr17 60040461 60040504 -35232147 + T-rich Low_complexity Low_complexity 3 44 0 5 1043 198 91 0 0 chr17 60040540 60040573 -35232078 + (GTTTG)n Simple_repeat Simple_repeat 3 35 0 6 1043 505 355 0 0 chr17 60040575 60040713 -35231938 - ID_B1 SINE B4 -5 219 82 6 1043 21 0 0 0 chr17 60040868 60040889 -35231762 + AT_rich Low_complexity Low_complexity 1 21 0 6 1043 973 23 16 0 chr17 60040945 60041073 -35231578 - L1Md_F3 LINE L1 -16 6568 6439 6 1043 491 0 17 0 chr17 60041121 60041180 -35231471 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 6 1043 201 185 34 85 chr17 60041701 60041760 -35230891 + L2 LINE L2 1862 1917 -1502 6 1043 533 149 8 10 chr17 60043599 60043703 -35228948 - L1VL4 LINE L1 -5506 1013 911 6 1043 23 33 0 0 chr17 60044329 60044359 -35228292 + AT_rich Low_complexity Low_complexity 1 30 0 6 1043 27 81 0 0 chr17 60044989 60045051 -35227600 + AT_rich Low_complexity Low_complexity 1 62 0 6 1043 24 85 0 0 chr17 60045176 60045235 -35227416 + AT_rich Low_complexity Low_complexity 1 59 0 6 1043 4412 14 0 0 chr17 60047653 60048154 -35224497 + L1Md_A LINE L1 6082 6582 0 7 1043 195 69 0 0 chr17 60048159 60048188 -35224463 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 1043 996 120 57 47 chr17 60048191 60048384 -35224267 + B2_Mm2 SINE B2 1 195 0 7 1043 184 0 97 0 chr17 60048724 60048755 -35223896 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 7 1043 3754 40 40 0 chr17 60048965 60049437 -35223214 - L1Md_F2 LINE L1 -12 6570 6080 7 1043 10067 18 0 1 chr17 60051534 60052712 -35219939 - L1_Mm LINE L1 -1276 4607 3431 7 1043 1017 265 49 46 chr17 60052756 60053061 -35219590 - MTD LTR MaLR -86 333 28 7 1043 938 308 205 39 chr17 60053114 60053860 -35218791 - MTD-int LTR MaLR -2 1256 387 7 1043 969 17 0 0 chr17 60053873 60053988 -35218663 + (TG)n Simple_repeat Simple_repeat 2 116 0 7 1043 3731 136 60 2 chr17 60053988 60054592 -35218059 - Lx2 LINE L1 -124 6873 6235 7 1043 2747 181 35 22 chr17 60055433 60055980 -35216671 - Lx2B LINE L1 -3 6997 6444 7 1043 555 16 0 0 chr17 60056377 60056441 -35216210 + (TC)n Simple_repeat Simple_repeat 1 64 0 8 1043 1788 253 20 5 chr17 60057934 60058328 -35214323 + Lx5 LINE L1 6639 7038 -12 8 1043 304 296 4 32 chr17 60058691 60058797 -35213854 + B1_Mur2 SINE Alu 1 105 -44 8 1043 564 261 21 14 chr17 60058875 60059019 -35213632 + MTEa LTR MaLR 1 145 -234 8 1043 821 276 30 58 chr17 60059124 60059426 -35213225 + MTEb LTR MaLR 68 377 -2 8 1043 591 183 17 17 chr17 60059640 60059818 -35212833 + (TA)n Simple_repeat Simple_repeat 2 179 0 8 1043 391 109 0 0 chr17 60059980 60060035 -35212616 - Lx3A LINE L1 -632 6349 6295 8 1043 2932 149 90 35 chr17 60060029 60060607 -35212044 + Lx3A LINE L1 6364 6973 -8 8 1043 23 54 0 0 chr17 60060693 60060730 -35211921 + AT_rich Low_complexity Low_complexity 1 37 0 8 1043 27 0 0 0 chr17 60060917 60060944 -35211707 + AT_rich Low_complexity Low_complexity 1 27 0 8 1043 22 56 0 0 chr17 60061095 60061131 -35211520 + AT_rich Low_complexity Low_complexity 1 36 0 8 1043 279 0 0 0 chr17 60061766 60061797 -35210854 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 9 1043 1837 199 107 17 chr17 60062044 60062504 -35210147 - RLTR11A2 LTR ERVK 0 527 27 9 1043 1070 261 77 26 chr17 60062918 60063268 -35209383 + ORR1D2 LTR MaLR 2 369 -1 9 1043 934 275 116 45 chr17 60063280 60063643 -35209008 - MTD LTR MaLR -40 379 1 9 1043 1057 0 0 0 chr17 60064484 60064602 -35208049 - L1_Mm LINE L1 -1800 4083 3966 9 1043 2437 123 0 3 chr17 60064823 60065180 -35207471 - L1_Mus3 LINE L1 -101 6537 6182 9 1043 515 81 3 0 chr17 60065533 60065618 -35207033 - L1MB7 LINE L1 -335 5849 5732 9 1043 314 49 0 0 chr17 60065611 60065652 -35206999 + L1MB7 LINE L1 5705 5745 -839 9 1043 545 274 0 222 chr17 60066140 60066333 -35206318 + B3 SINE B2 13 186 -30 9 1043 375 23 0 0 chr17 60066333 60066377 -35206274 + (CA)n Simple_repeat Simple_repeat 1 44 0 9 1043 260 274 0 222 chr17 60066377 60066413 -35206238 + B2_Mm1a SINE B2 161 191 -2 9 1043 384 309 115 0 chr17 60066737 60066876 -35205775 - MTE2b LTR MaLR -7 372 218 9 1043 440 281 29 79 chr17 60066890 60067029 -35205622 - MTE2b LTR MaLR -216 163 32 9 1043 21 57 0 0 chr17 60067569 60067604 -35205047 + AT_rich Low_complexity Low_complexity 1 35 0 1 1043 378 0 0 0 chr17 60067652 60067694 -35204957 + (TCTA)n Simple_repeat Simple_repeat 1 42 0 1 1043 22 0 0 0 chr17 60067832 60067854 -35204797 + AT_rich Low_complexity Low_complexity 1 22 0 1 1043 2071 134 68 3 chr17 60067855 60068207 -35204444 - Lx3A LINE L1 -5 6976 6602 1 1043 452 82 0 0 chr17 60068216 60068277 -35204374 - L1_Mur1 LINE L1 -488 5398 5338 1 1043 6578 154 14 37 chr17 60068275 60068304 -35204347 + L1_Mm LINE L1 4448 4476 -1407 1 1043 3186 44 5 0 chr17 60068304 60068687 -35203964 + IAPEY_LTR LTR ERVK 1 385 0 1 1043 6578 154 14 37 chr17 60068687 60068836 -35203815 + L1_Mm LINE L1 4477 4601 -1282 1 1043 1631 93 40 88 chr17 60068836 60069132 -35203519 + L1Md_F2 LINE L1 6301 6582 0 1 1043 6578 154 14 37 chr17 60069132 60070205 -35202446 + L1_Mm LINE L1 4602 5672 -211 1 1043 23 0 0 0 chr17 60071376 60071399 -35201252 + AT_rich Low_complexity Low_complexity 1 23 0 1 1043 194 180 0 39 chr17 60071708 60071760 -35200891 + A-rich Low_complexity Low_complexity 2 51 0 1 1043 239 328 45 40 chr17 60071925 60072108 -35200543 - MIRb SINE MIR -48 220 39 1 1043 21 57 0 0 chr17 60072703 60072738 -35199913 + AT_rich Low_complexity Low_complexity 1 35 0 1 1043 3929 118 30 2 chr17 60073087 60073684 -35198967 - Lx LINE L1 -3 6651 6038 1 1043 404 99 284 0 chr17 60073684 60073765 -35198886 + Lx LINE L1 6538 6641 -13 1 1043 282 56 0 0 chr17 60073767 60073803 -35198848 + (GA)n Simple_repeat Simple_repeat 2 37 0 1 1043 711 0 0 0 chr17 60073803 60073882 -35198769 + (GAA)n Simple_repeat Simple_repeat 3 81 0 1 1043 222 37 0 0 chr17 60073882 60073908 -35198743 + (GGAA)n Simple_repeat Simple_repeat 3 29 0 1 1043 331 167 42 0 chr17 60073915 60073987 -35198664 + RMER6C LTR ERVK 616 690 0 1 1043 1336 314 34 17 chr17 60073995 60074471 -35198180 + MERVL_2A-int LTR ERVL 4106 4589 -1125 1 1043 1886 298 39 12 chr17 60074535 60075201 -35197450 + MERVL_2A-int LTR ERVL 4802 5485 -276 1 1043 447 209 0 0 chr17 60075201 60075311 -35197340 + (TG)n Simple_repeat Simple_repeat 2 111 0 1 1043 581 263 42 87 chr17 60075322 60075609 -35197042 + MERVL_2A-int LTR ERVL 5488 5761 0 1 1043 774 276 51 72 chr17 60075609 60075984 -35196667 + MT2A LTR ERVL 1 460 -73 1 1043 617 310 79 26 chr17 60076169 60076626 -35196025 + L1MA7 LINE L1 5679 6159 -132 1 1043 29 28 0 0 chr17 60076666 60076702 -35195949 + AT_rich Low_complexity Low_complexity 1 36 0 1 1043 3765 111 16 64 chr17 60078023 60078706 -35193945 - L1_Mur1 LINE L1 -1032 4854 4205 1 1043 6918 85 38 3 chr17 60078707 60079692 -35192959 + L1_Mur1 LINE L1 4855 5873 -13 1 1043 3260 160 32 5 chr17 60079692 60080282 -35192369 + Lx3A LINE L1 6372 6977 -4 1 1043 528 126 0 0 chr17 60081096 60081183 -35191468 + (TTTA)n Simple_repeat Simple_repeat 1 87 0 1 1043 319 279 64 55 chr17 60081615 60081835 -35190816 + L1MC LINE L1 4837 5058 -1088 1 1043 273 57 0 0 chr17 60081992 60082027 -35190624 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 1043 859 305 18 70 chr17 60082051 60082509 -35190142 + L1MC LINE L1 5338 5771 -562 1 1043 411 56 0 0 chr17 60082866 60082920 -35189731 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1043 705 259 66 11 chr17 60083593 60083781 -35188870 + ORR1D1 LTR MaLR 1 184 -183 1 1043 1612 197 122 26 chr17 60083786 60084278 -35188373 + RLTR13D6 LTR ERVK 1 485 -538 1 1043 576 284 13 13 chr17 60084363 60084520 -35188131 - ORR1D1 LTR MaLR -49 325 169 1 1043 279 79 0 0 chr17 60084743 60084781 -35187870 + (A)n Simple_repeat Simple_repeat 1 38 0 1 1043 1067 112 12 0 chr17 60085629 60085798 -35186853 + (GGAA)n Simple_repeat Simple_repeat 3 173 0 1 1043 2091 174 92 116 chr17 60085805 60086512 -35186139 + RMER6C LTR ERVK 1 690 0 1 1043 1716 272 41 9 chr17 60087089 60087530 -35185121 - Lx5 LINE L1 -3 7047 6593 1 1043 400 284 44 59 chr17 60088938 60089073 -35183578 - MLT2C2 LTR ERVL -12 547 415 1 1043 290 350 14 49 chr17 60089094 60089238 -35183413 + MLT1A LTR MaLR 19 157 -217 1 1043 318 206 0 0 chr17 60089518 60089586 -35183065 + (CATG)n Simple_repeat Simple_repeat 1 68 0 1 1043 437 239 130 19 chr17 60090097 60090254 -35182397 - MTD LTR MaLR -14 405 238 1 1043 686 268 57 55 chr17 60090366 60090613 -35182038 - MTD LTR MaLR -168 232 1 1 1043 207 100 0 0 chr17 60090674 60090704 -35181947 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 1 1043 325 280 0 21 chr17 60090844 60090939 -35181712 + L1MA6 LINE L1 6177 6269 -31 1 1043 335 373 140 7 chr17 60091147 60091468 -35181183 - MLT1C LTR MaLR -71 396 98 1 1043 21 0 0 0 chr17 60091603 60091624 -35181027 + AT_rich Low_complexity Low_complexity 1 21 0 1 1043 469 267 60 15 chr17 60093717 60093850 -35178801 + B1_Mur1 SINE Alu 1 139 -10 1 1043 293 0 0 26 chr17 60093851 60093889 -35178762 + (TTAA)n Simple_repeat Simple_repeat 1 37 0 1 1043 225 374 62 36 chr17 60093968 60094273 -35178378 + MLT1A0 LTR MaLR 48 360 -5 1 1043 23 0 0 0 chr17 60095801 60095824 -35176827 + AT_rich Low_complexity Low_complexity 1 23 0 1 1043 29 0 0 0 chr17 60095952 60095981 -35176670 + AT_rich Low_complexity Low_complexity 1 29 0 1 1043 1560 115 53 4 chr17 60095982 60096227 -35176424 - Lx3A LINE L1 -3 6978 6722 1 1043 257 339 0 0 chr17 60096776 60096841 -35175810 + Lx8 LINE L1 7174 7238 -235 1 1043 261 75 0 0 chr17 60096950 60096990 -35175661 + (TCTG)n Simple_repeat Simple_repeat 1 40 0 1 1043 1275 84 0 0 chr17 60096990 60097168 -35175483 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 1 1043 352 51 17 17 chr17 60097170 60097230 -35175421 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 1 1043 3191 190 159 64 chr17 60097394 60098211 -35174440 - RMER19B LTR ERVK -7 895 1 1 1043 333 0 0 0 chr17 60098259 60098296 -35174355 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 1 1043 424 339 67 23 chr17 60098392 60099011 -35173640 - L1_Mur1 LINE L1 -3664 2216 1542 1 1043 373 378 25 31 chr17 60099014 60099175 -35173476 + B3A SINE B2 1 160 -38 1 1043 513 47 0 0 chr17 60100869 60100933 -35171718 + (GA)n Simple_repeat Simple_repeat 1 64 0 1 1043 22 88 0 0 chr17 60101392 60101449 -35171202 + AT_rich Low_complexity Low_complexity 1 57 0 1 1043 263 289 65 112 chr17 60102412 60102626 -35170025 + MT2B2 LTR ERVL 61 264 -320 1 1043 469 289 7 53 chr17 60102510 60102526 -35170125 + ID_B1 SINE B4 81 223 -1 1 1043 844 172 0 0 chr17 60102526 60102660 -35169991 + B1_Mur4 SINE Alu 16 149 -1 1 1043 23 0 0 0 chr17 60102719 60102742 -35169909 + AT_rich Low_complexity Low_complexity 1 23 0 1 1043 4087 81 25 5 chr17 60102841 60103410 -35169241 - L1Md_F2 LINE L1 0 6582 6003 1 1043 530 95 0 40 chr17 60104456 60104555 -35168096 - L1Md_F2 LINE L1 -12 6570 6476 1 1043 3228 67 0 34 chr17 60104555 60105022 -35167629 + L1_Mm LINE L1 1944 2394 -3489 1 1043 3865 269 108 17 chr17 60105282 60106499 -35166152 - Lx9 LINE L1 -2 7642 6316 1 1043 994 250 45 33 chr17 60107956 60108291 -35164360 - RLTR15 LTR ERVK -20 339 1 1 1043 23 54 0 0 chr17 60108343 60108380 -35164271 + AT_rich Low_complexity Low_complexity 1 37 0 1 1043 408 20 0 0 chr17 60109203 60109252 -35163399 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1043 210 37 0 0 chr17 60109295 60109322 -35163329 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1 1043 43 20 0 0 chr17 60109411 60109461 -35163190 + AT_rich Low_complexity Low_complexity 1 50 0 1 1043 3290 171 104 49 chr17 60109812 60110247 -35162404 + RMER17A2 LTR ERVK 1 445 -461 1 1043 896 97 7 0 chr17 60110247 60110402 -35162249 + (TC)n Simple_repeat Simple_repeat 1 156 0 1 1043 3290 171 104 49 chr17 60110402 60110822 -35161829 + RMER17A2 LTR ERVK 446 902 -4 1 1043 189 0 0 0 chr17 60110886 60110907 -35161744 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 1043 9079 119 18 8 chr17 60110931 60112980 -35159671 - Lx3B LINE L1 -4 6969 4906 1 1043 405 0 0 0 chr17 60113037 60113082 -35159569 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 1043 553 206 87 0 chr17 60114105 60114231 -35158420 + RMER19B LTR ERVK 1 137 -765 1 1043 2776 186 4 6 chr17 60114236 60114740 -35157911 - RLTR20B2 LTR ERVK -57 503 1 1 1043 3584 196 78 9 chr17 60114740 60115496 -35157155 + RMER19B LTR ERVK 95 902 0 1 1043 684 282 145 15 chr17 60117157 60117481 -35155170 - ORR1D1 LTR MaLR -8 366 1 1 1043 25 31 0 0 chr17 60118024 60118056 -35154595 + AT_rich Low_complexity Low_complexity 1 32 0 1 1043 342 349 9 0 chr17 60118068 60118177 -35154474 - B3A SINE B2 -50 148 39 1 1043 1168 211 37 6 chr17 60118178 60118446 -35154205 - RMER10B LTR ERVL -143 299 19 1 1043 195 309 81 20 chr17 60119963 60120062 -35152589 - MIRc SINE MIR -67 201 97 1 1043 21 89 0 0 chr17 60120476 60120532 -35152119 + AT_rich Low_complexity Low_complexity 1 56 0 1 1043 22 0 0 0 chr17 60120657 60120679 -35151972 + AT_rich Low_complexity Low_complexity 1 22 0 1 1043 359 113 0 16 chr17 60121096 60121159 -35151492 + (CCCCCT)n Simple_repeat Simple_repeat 3 64 0 1 1043 192 77 0 0 chr17 60122264 60122290 -35150361 + (CATATA)n Simple_repeat Simple_repeat 2 27 0 1 1043 1968 227 95 13 chr17 60122541 60123067 -35149584 + Lx9 LINE L1 7026 7594 -50 1 1043 380 279 240 21 chr17 60123132 60123336 -35149315 + B4 SINE B4 2 251 -41 1 1043 260 127 0 18 chr17 60124373 60124429 -35148222 + (TTTTTG)n Simple_repeat Simple_repeat 6 60 0 1 1043 863 251 60 83 chr17 60124442 60124707 -35147944 + MTD LTR MaLR 63 321 -98 1 1043 22 0 0 0 chr17 60124821 60124843 -35147808 + AT_rich Low_complexity Low_complexity 1 22 0 1 1043 579 273 38 38 chr17 60124895 60125108 -35147543 + B3 SINE B2 1 213 -3 1 1043 293 275 26 66 chr17 60125181 60125333 -35147318 - RSINE1 SINE B4 -19 146 1 1 1043 838 199 124 5 chr17 60125505 60125707 -35146944 - URR1A DNA MER1_type 0 226 1 1 1043 205 269 12 25 chr17 60126600 60126680 -35145971 + GA-rich Low_complexity Low_complexity 2 80 0 1 1043 24 0 0 0 chr17 60128996 60129020 -35143631 + AT_rich Low_complexity Low_complexity 1 24 0 1 1043 277 318 27 27 chr17 60130088 60130198 -35142453 + B1F SINE Alu 32 141 -8 1 1043 246 194 0 0 chr17 60130226 60130293 -35142358 + (CTA)n Simple_repeat Simple_repeat 1 67 0 1 1043 1707 152 231 50 chr17 60131610 60132012 -35140639 - L1_Mus2 LINE L1 0 6566 6092 2 1043 511 133 11 0 chr17 60132007 60132097 -35140554 + L1_Mm LINE L1 5262 5352 -531 2 1043 1441 77 0 19 chr17 60132751 60132963 -35139688 - L1Md_F2 LINE L1 -4 6578 6371 2 1043 281 330 11 11 chr17 60133739 60133828 -35138823 - B3A SINE B2 -109 89 1 2 1043 1945 160 55 44 chr17 60133913 60134275 -35138376 + L1_Mur3 LINE L1 2629 2987 -2893 2 1043 274 23 23 23 chr17 60134275 60134319 -35138332 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 2 1043 1945 160 55 44 chr17 60134319 60134356 -35138295 + L1_Mur3 LINE L1 2988 3038 -2842 2 1043 1366 135 14 214 chr17 60134356 60134865 -35137786 + RMER17C LTR ERVK 1 407 -3 2 1043 1945 160 55 44 chr17 60134865 60134915 -35137736 + L1_Mur3 LINE L1 3039 3083 -2797 2 1043 236 229 56 28 chr17 60135005 60135077 -35137574 - MER46C DNA MER2_type 0 338 265 2 1043 24 0 0 0 chr17 60135237 60135261 -35137390 + AT_rich Low_complexity Low_complexity 1 24 0 2 1043 23 0 0 0 chr17 60135963 60135986 -35136665 + AT_rich Low_complexity Low_complexity 1 23 0 2 1043 3350 67 40 7 chr17 60136402 60136852 -35135799 - L1_Mus1 LINE L1 -1 6566 6102 2 1043 456 19 0 0 chr17 60136858 60136911 -35135740 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1043 408 246 8 62 chr17 60136915 60137045 -35135606 - Lx9 LINE L1 -243 7401 7279 2 1043 551 301 77 9 chr17 60137047 60137268 -35135383 + Lx9 LINE L1 7023 7258 -386 2 1043 855 312 23 38 chr17 60137238 60137634 -35135017 - Lx8 LINE L1 -196 7277 6888 2 1043 231 61 0 0 chr17 60137947 60137980 -35134671 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1043 204 286 45 30 chr17 60138128 60138213 -35134438 + L2b LINE L2 3291 3407 -19 2 1043 24 0 0 0 chr17 60138817 60138841 -35133810 + AT_rich Low_complexity Low_complexity 1 24 0 2 1043 26 0 0 0 chr17 60139488 60139514 -35133137 + AT_rich Low_complexity Low_complexity 1 26 0 2 1043 793 304 72 19 chr17 60141191 60141509 -35131142 - RMER20A LTR ERVK 0 516 182 2 1043 239 214 36 0 chr17 60142881 60142937 -35129714 - ORR1C2 LTR MaLR -218 166 109 2 1043 243 0 0 0 chr17 60142984 60143011 -35129640 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1043 21 0 0 0 chr17 60143136 60143157 -35129494 + AT_rich Low_complexity Low_complexity 1 21 0 2 1043 1242 246 10 26 chr17 60143389 60143694 -35128957 - ORR1D1 LTR MaLR 0 374 75 2 1043 275 172 0 59 chr17 60143696 60143764 -35128887 - RMER6C LTR ERVK 0 690 627 2 1043 213 337 35 35 chr17 60143822 60143908 -35128743 - B1_Mus2 SINE Alu -47 100 15 2 1043 280 250 83 83 chr17 60143890 60143916 -35128735 - B1_Mur2 SINE Alu -18 131 23 2 1043 373 164 0 121 chr17 60143916 60143999 -35128652 - MT2B LTR ERVL -342 259 187 2 1043 238 189 0 0 chr17 60144015 60144052 -35128599 - RMER6C LTR ERVK -681 39 3 2 1043 310 171 32 97 chr17 60144052 60144137 -35128514 - ORR1D1 LTR MaLR -298 76 3 2 1043 2242 181 22 10 chr17 60144145 60144559 -35128092 - ORR1D1-int LTR MaLR -1 1508 1090 2 1043 429 54 0 0 chr17 60144560 60144616 -35128035 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1043 336 48 0 0 chr17 60144617 60144659 -35127992 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 1043 869 298 78 28 chr17 60144786 60145304 -35127347 - Lx5 LINE L1 -26 7434 6450 2 1043 422 227 11 119 chr17 60145319 60145504 -35127147 + L1_Mur2 LINE L1 4734 4898 -979 2 1043 512 99 0 0 chr17 60145547 60145618 -35127033 - L1Md_F2 LINE L1 -405 6177 6107 2 1043 2797 87 18 0 chr17 60145618 60146010 -35126641 + L1_Mus1 LINE L1 6169 6567 0 2 1043 1056 88 0 0 chr17 60146951 60147088 -35125563 + B1_Mus2 SINE Alu 1 137 -10 2 1043 510 17 0 0 chr17 60147088 60147147 -35125504 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 2 1043 220 183 41 27 chr17 60147250 60147323 -35125328 + (TA)n Simple_repeat Simple_repeat 2 75 0 2 1043 462 18 0 0 chr17 60147354 60147409 -35125242 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 2 1043 1273 246 122 21 chr17 60147409 60147827 -35124824 - MT2A LTR ERVL -73 460 1 2 1043 23 0 0 0 chr17 60148124 60148147 -35124504 + AT_rich Low_complexity Low_complexity 1 23 0 2 1043 342 0 0 0 chr17 60149362 60149400 -35123251 + (TAA)n Simple_repeat Simple_repeat 2 39 0 2 1043 249 119 0 0 chr17 60149403 60149445 -35123206 + (CAA)n Simple_repeat Simple_repeat 3 44 0 2 1043 40 73 0 0 chr17 60149916 60149998 -35122653 + AT_rich Low_complexity Low_complexity 1 82 0 2 1043 1446 68 123 26 chr17 60149998 60150226 -35122425 - L1Md_F2 LINE L1 -3 6579 6330 2 1043 3166 245 83 56 chr17 60150530 60150657 -35121994 - Lx9 LINE L1 -1 7643 7517 2 1043 378 0 0 0 chr17 60150657 60150699 -35121952 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1043 3166 245 83 56 chr17 60150699 60151378 -35121273 - Lx9 LINE L1 -128 7516 6820 2 1043 2989 40 0 0 chr17 60151378 60151732 -35120919 - IAPEY2_LTR LTR ERVK -3 354 1 2 1043 3166 245 83 56 chr17 60151732 60152007 -35120644 - Lx9 LINE L1 -825 6819 6533 2 1043 1024 274 99 28 chr17 60152025 60152378 -35120273 + Lx6 LINE L1 7042 7419 -41 2 1043 565 271 46 31 chr17 60152417 60152611 -35120040 - B3A SINE B2 -1 197 1 2 1043 2438 56 0 0 chr17 60152757 60153059 -35119592 + L1Md_F2 LINE L1 6047 6348 -234 2 1043 3666 54 7 0 chr17 60153060 60153524 -35119127 + L1Md_F2 LINE L1 6101 6567 -15 2 1043 300 290 42 77 chr17 60154459 60154720 -35117931 + RMER17C LTR ERVK 103 354 -56 2 1043 22 0 0 0 chr17 60156707 60156729 -35115922 + AT_rich Low_complexity Low_complexity 1 22 0 2 1043 414 0 0 0 chr17 60157400 60157446 -35115205 + (TTA)n Simple_repeat Simple_repeat 1 46 0 2 1043 227 186 0 0 chr17 60157455 60157498 -35115153 + Lx7 LINE L1 6792 6834 -862 2 1043 294 29 0 0 chr17 60158899 60158934 -35113717 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1043 1104 257 31 39 chr17 60159641 60159991 -35112660 - RMER19B LTR ERVK -594 308 1 2 1043 28 0 0 0 chr17 60161077 60161105 -35111546 + AT_rich Low_complexity Low_complexity 1 28 0 2 1043 815 122 7 0 chr17 60161521 60161669 -35110982 - L1_Mus4 LINE L1 -2 6634 6486 2 1043 302 191 0 35 chr17 60161726 60161813 -35110838 + CT-rich Low_complexity Low_complexity 4 87 0 2 1043 204 158 0 0 chr17 60161825 60161863 -35110788 + CT-rich Low_complexity Low_complexity 2 39 0 2 1044 480 128 0 0 chr17 60162402 60162480 -35110171 + (CATA)n Simple_repeat Simple_repeat 3 80 0 2 1044 28 86 0 0 chr17 60163497 60163567 -35109084 + AT_rich Low_complexity Low_complexity 1 70 0 2 1044 950 75 97 0 chr17 60163840 60163974 -35108677 + B1_Mus2 SINE Alu 1 147 0 2 1044 243 0 0 0 chr17 60163990 60164017 -35108634 + (GA)n Simple_repeat Simple_repeat 2 28 0 2 1044 947 342 55 34 chr17 60164816 60165321 -35107330 - Lx9 LINE L1 -238 7406 6891 2 1044 696 355 117 7 chr17 60165930 60166333 -35106318 - Lx9 LINE L1 -809 6835 6389 2 1044 490 250 8 0 chr17 60166378 60166635 -35106016 + (TA)n Simple_repeat Simple_repeat 1 259 0 2 1044 423 0 0 0 chr17 60166714 60166761 -35105890 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1044 1524 222 37 59 chr17 60166878 60166920 -35105731 + MTC LTR MaLR 60 98 -323 2 1044 1140 75 0 0 chr17 60166920 60167066 -35105585 + B1_Mus2 SINE Alu 2 147 0 2 1044 1524 222 37 59 chr17 60167066 60167378 -35105273 + MTC LTR MaLR 99 406 -15 2 1044 408 171 40 0 chr17 60167361 60167437 -35105214 + MTC-int LTR MaLR 5 83 -1175 2 1044 750 205 18 89 chr17 60167427 60167652 -35104999 + MTC-int LTR MaLR 1045 1253 -5 2 1044 1830 192 102 0 chr17 60167657 60167807 -35104844 + MTC LTR MaLR 1 164 -257 2 1044 180 0 0 0 chr17 60167807 60167827 -35104824 + (TTCC)n Simple_repeat Simple_repeat 3 22 0 2 1044 1830 192 102 0 chr17 60167827 60168050 -35104601 + MTC LTR MaLR 165 410 -11 2 1044 335 268 16 8 chr17 60168101 60168225 -35104426 - L1_Rod LINE L1 -3087 2760 2636 2 1044 432 123 0 0 chr17 60168258 60168331 -35104320 + (TCC)n Simple_repeat Simple_repeat 3 75 0 2 1044 744 249 78 15 chr17 60168331 60168600 -35104051 - L1_Rod LINE L1 -3278 2569 2284 2 1044 33151 29 0 0 chr17 60168606 60173365 -35099286 - L1Md_T LINE L1 0 6582 1850 2 1044 1816 287 45 40 chr17 60173366 60173852 -35098799 - L1_Rod LINE L1 -3572 2275 1780 2 1044 359 68 17 0 chr17 60173852 60173911 -35098740 + (TTTG)n Simple_repeat Simple_repeat 1 60 0 2 1044 985 62 47 0 chr17 60173911 60174039 -35098612 - B1_Mus2 SINE Alu -13 134 1 2 1044 1816 287 45 40 chr17 60174039 60174482 -35098169 - L1_Rod LINE L1 -4068 1779 1341 2 1044 248 185 71 36 chr17 60174485 60174541 -35098110 + Lx7 LINE L1 7237 7294 -402 2 1044 294 229 0 78 chr17 60174559 60174622 -35098029 + T-rich Low_complexity Low_complexity 96 154 0 2 1044 234 0 0 0 chr17 60174622 60174648 -35098003 + (TGG)n Simple_repeat Simple_repeat 1 26 0 2 1044 294 229 0 78 chr17 60174648 60174750 -35097901 + T-rich Low_complexity Low_complexity 3 95 0 2 1044 378 0 0 0 chr17 60174886 60174928 -35097723 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 2 1044 662 280 27 0 chr17 60174952 60175138 -35097513 - Lx6 LINE L1 -176 7284 7094 2 1044 1441 280 21 37 chr17 60175132 60175566 -35097085 - Lx6 LINE L1 -486 6974 6548 2 1044 531 339 85 8 chr17 60175583 60175830 -35096821 + Lx8 LINE L1 6974 7239 -234 2 1044 432 0 0 0 chr17 60176984 60177032 -35095619 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1044 916 325 52 32 chr17 60177207 60177648 -35095003 + Lx8 LINE L1 6801 7250 -223 2 1044 710 121 9 0 chr17 60177726 60177842 -35094809 + (GAAA)n Simple_repeat Simple_repeat 1 117 0 2 1044 819 334 19 34 chr17 60177976 60178298 -35094353 + Lx8 LINE L1 6258 6574 -899 2 1044 430 299 180 0 chr17 60180047 60180241 -35092410 + Lx9 LINE L1 6320 6548 -1096 2 1044 1932 234 16 14 chr17 60180235 60180659 -35091992 + Lx2B LINE L1 6558 6982 -18 2 1044 765 333 23 7 chr17 60180709 60181014 -35091637 + Lx9 LINE L1 6583 6892 -752 2 1044 22 56 0 0 chr17 60181256 60181292 -35091359 + AT_rich Low_complexity Low_complexity 1 36 0 2 1044 315 113 0 0 chr17 60181964 60182017 -35090634 + (CCA)n Simple_repeat Simple_repeat 1 53 0 2 1044 191 143 0 39 chr17 60182020 60182071 -35090580 + A-rich Low_complexity Low_complexity 5 53 0 2 1044 348 313 109 52 chr17 60182349 60182541 -35090110 - MTD LTR MaLR -214 205 3 2 1044 1124 258 70 20 chr17 60182659 60183015 -35089636 + Lx7 LINE L1 6979 7352 -344 2 1044 216 67 0 0 chr17 60183130 60183160 -35089491 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2 1044 1029 76 41 7 chr17 60184383 60184529 -35088122 + L1_Mus2 LINE L1 6416 6566 0 2 1044 217 143 20 0 chr17 60184546 60184573 -35088078 + (CAA)n Simple_repeat Simple_repeat 2 28 0 2 1044 207 0 0 0 chr17 60184573 60184596 -35088055 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1044 217 143 20 0 chr17 60184596 60184617 -35088034 + (CAA)n Simple_repeat Simple_repeat 2 23 0 2 1044 1175 111 0 67 chr17 60184629 60184822 -35087829 + B2_Mm2 SINE B2 2 181 -14 2 1044 1975 146 15 3 chr17 60185231 60185555 -35087096 - Lx4A LINE L1 -1 7057 6730 2 1044 21 0 0 0 chr17 60185769 60185790 -35086861 + AT_rich Low_complexity Low_complexity 1 21 0 2 1044 21 36 0 0 chr17 60186247 60186275 -35086376 + AT_rich Low_complexity Low_complexity 1 28 0 3 1044 21 0 0 0 chr17 60186540 60186561 -35086090 + AT_rich Low_complexity Low_complexity 1 21 0 3 1044 1079 75 7 7 chr17 60186573 60186720 -35085931 - B1_Mm SINE Alu 0 147 1 3 1044 279 0 0 0 chr17 60187304 60187335 -35085316 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1044 1109 108 13 0 chr17 60187396 60187554 -35085097 + B2_Mm1t SINE B2 1 160 -33 3 1044 275 137 324 27 chr17 60187603 60187714 -35084937 + B2_Mm2 SINE B2 47 190 -5 3 1044 440 169 122 41 chr17 60187741 60187864 -35084787 - L1_Mur3 LINE L1 -463 5417 5285 3 1044 538 285 8 0 chr17 60187865 60187995 -35084656 + RLTR19C LTR ERVK 376 506 0 3 1044 1560 155 124 57 chr17 60188189 60188559 -35084092 + RMER10B LTR ERVL 4 398 0 3 1044 361 358 0 31 chr17 60188622 60188749 -35083902 + MTE2b LTR MaLR 5 127 -252 3 1044 570 162 34 6 chr17 60188837 60188958 -35083693 - B1_Mur4 SINE Alu 0 150 33 3 1044 195 114 0 0 chr17 60189030 60189065 -35083586 + (ATTG)n Simple_repeat Simple_repeat 1 35 0 3 1044 288 248 108 31 chr17 60190424 60190553 -35082098 - MER67D LTR ERV1 -356 158 20 3 1044 276 200 0 0 chr17 60190702 60190772 -35081879 + GA-rich Low_complexity Low_complexity 3 72 0 3 1044 3570 80 17 0 chr17 60190790 60191265 -35081386 + L1_Mus1 LINE L1 6085 6567 0 3 1044 23 54 0 0 chr17 60191301 60191338 -35081313 + AT_rich Low_complexity Low_complexity 1 37 0 3 1044 390 21 0 0 chr17 60193254 60193301 -35079350 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1044 21 0 0 0 chr17 60194731 60194752 -35077899 + AT_rich Low_complexity Low_complexity 1 21 0 3 1044 227 271 69 50 chr17 60194893 60194994 -35077657 - PB1 SINE Alu -4 123 21 3 1044 34 42 0 0 chr17 60195817 60195865 -35076786 + AT_rich Low_complexity Low_complexity 1 48 0 3 1044 3799 63 2 4 chr17 60195885 60196376 -35076275 - L1Md_F2 LINE L1 -4 6578 6089 3 1044 5264 83 8 3 chr17 60196402 60197123 -35075528 - L1Md_F2 LINE L1 -19 6563 5839 3 1044 800 150 6 0 chr17 60198254 60198414 -35074237 + CT-rich Low_complexity Low_complexity 2 162 0 3 1044 23 0 0 0 chr17 60198875 60198898 -35073753 + AT_rich Low_complexity Low_complexity 1 23 0 3 1044 1052 110 0 0 chr17 60199072 60199218 -35073433 - B1_Mus1 SINE Alu -2 146 1 3 1044 367 91 0 15 chr17 60199221 60199288 -35073363 - L1Md_F2 LINE L1 -5 6577 6512 3 1044 696 359 116 33 chr17 60199468 60199984 -35072667 - MER21B LTR ERV1 -13 850 292 3 1044 530 273 26 16 chr17 60199984 60200174 -35072477 + Lx7 LINE L1 7504 7695 -1 3 1044 1074 258 135 16 chr17 60200313 60200980 -35071671 - RLTR40 LTR ERVK -9 808 1 3 1044 652 329 44 0 chr17 60201429 60201654 -35070997 + B4A SINE B4 2 236 -56 3 1044 230 185 0 18 chr17 60201654 60201709 -35070942 + GA-rich Low_complexity Low_complexity 1 54 0 3 1044 21 71 0 0 chr17 60201927 60201969 -35070682 + AT_rich Low_complexity Low_complexity 1 42 0 3 1044 1152 68 0 7 chr17 60202411 60202558 -35070093 - B1_Mus1 SINE Alu -1 147 2 3 1044 3167 145 7 43 chr17 60202594 60203171 -35069480 - Lx2 LINE L1 0 6997 6442 3 1044 536 279 15 8 chr17 60203941 60204071 -35068580 - B1_Mur1 SINE Alu -2 147 17 3 1044 426 94 0 0 chr17 60204769 60204833 -35067818 + (CA)n Simple_repeat Simple_repeat 1 64 0 3 1044 1189 125 5 11 chr17 60205904 60206090 -35066561 - B2_Mm2 SINE B2 -9 186 2 3 1044 25 0 0 0 chr17 60206348 60206373 -35066278 + AT_rich Low_complexity Low_complexity 1 25 0 3 1044 1200 98 0 0 chr17 60207775 60207948 -35064703 + (TTTC)n Simple_repeat Simple_repeat 4 176 0 3 1044 4744 52 5 12 chr17 60207958 60208563 -35064088 - L1_Mus1 LINE L1 0 6567 5967 3 1044 1129 183 19 101 chr17 60208563 60208879 -35063772 + L1Md_F LINE L1 107 396 -6123 3 1044 1075 188 18 0 chr17 60210113 60210331 -35062320 + Lx2A1 LINE L1 6787 7008 0 3 1044 2211 207 35 41 chr17 60210624 60211188 -35061463 + RLTR31_Mm LTR ERVK 1 561 0 3 1044 2968 89 9 7 chr17 60211190 60211610 -35061041 + BGLII LTR ERVK 1 421 0 3 1044 558 284 126 44 chr17 60212628 60212834 -35059817 + ORR1D2 LTR MaLR 1 235 -135 3 1044 566 240 2 2 chr17 60213190 60213353 -35059298 + L1_Mur2 LINE L1 526 688 -6024 3 1044 22 56 0 0 chr17 60213388 60213424 -35059227 + AT_rich Low_complexity Low_complexity 1 36 0 3 1044 3657 136 19 10 chr17 60213437 60214015 -35058636 - Lx LINE L1 -1 6653 6071 3 1044 1476 135 0 9 chr17 60214045 60214269 -35058382 + Lx5 LINE L1 5552 5775 -102 3 1044 389 170 0 11 chr17 60214269 60214358 -35058293 + Lx2A LINE L1 6921 7008 0 3 1044 1476 170 0 734 chr17 60214358 60214457 -35058194 + Lx5 LINE L1 5776 5843 -43 3 1044 3547 89 0 38 chr17 60214454 60214791 -35057860 - L1_Mm LINE L1 -837 5046 4728 3 1044 5346 55 16 1 chr17 60214791 60215477 -35057174 - L1Md_F3 LINE L1 -14 6570 5875 3 1044 3547 89 0 38 chr17 60215477 60215667 -35056984 - L1_Mm LINE L1 -1156 4727 4539 3 1044 4140 59 2 4 chr17 60215665 60216193 -35056458 + L1Md_F2 LINE L1 5060 5586 -297 3 1044 8038 45 6 2 chr17 60216194 60217185 -35055466 + L1Md_F2 LINE L1 5588 6582 0 3 1044 727 179 0 0 chr17 60217200 60217340 -35055311 + Lx5 LINE L1 5827 5966 -1084 3 1044 2226 239 104 18 chr17 60217345 60217967 -35054684 + Lx5 LINE L1 6375 7050 0 3 1044 3303 157 24 10 chr17 60218005 60218602 -35054049 + Lx2 LINE L1 6391 6995 -2 3 1044 21 36 0 0 chr17 60218609 60218637 -35054014 + AT_rich Low_complexity Low_complexity 1 28 0 3 1044 36 23 0 0 chr17 60218659 60218702 -35053949 + AT_rich Low_complexity Low_complexity 1 43 0 3 1044 1137 88 0 0 chr17 60219182 60219330 -35053321 + B1_Mus1 SINE Alu 1 148 0 3 1044 382 75 15 15 chr17 60219330 60219398 -35053253 + (CAAAA)n Simple_repeat Simple_repeat 3 70 0 3 1044 374 250 0 0 chr17 60220113 60220189 -35052462 + PB1D9 SINE Alu 1 76 -44 3 1044 537 123 28 0 chr17 60220192 60220298 -35052353 + GA-rich Low_complexity Low_complexity 3 111 0 3 1044 323 113 0 16 chr17 60220385 60220448 -35052203 + (TA)n Simple_repeat Simple_repeat 1 62 0 3 1044 790 337 26 26 chr17 60220604 60220875 -35051776 + B4A SINE B4 22 292 0 3 1044 369 0 0 0 chr17 60222334 60222375 -35050276 + (TTA)n Simple_repeat Simple_repeat 2 42 0 3 1044 252 0 0 0 chr17 60222396 60222424 -35050227 + (GA)n Simple_repeat Simple_repeat 1 28 0 3 1044 1527 45 5 5 chr17 60222783 60222982 -35049669 + L1Md_F3 LINE L1 6370 6568 -16 3 1044 23 33 0 0 chr17 60222982 60223012 -35049639 + AT_rich Low_complexity Low_complexity 1 30 0 3 1044 296 322 91 25 chr17 60223561 60223682 -35048969 - B1F SINE Alu -1 148 20 3 1044 1980 202 134 123 chr17 60223963 60224642 -35048009 + RMER6C LTR ERVK 1 687 -3 3 1044 378 245 6 25 chr17 60225248 60225282 -35047369 + (TA)n Simple_repeat Simple_repeat 1 33 0 3 1044 216 86 0 0 chr17 60225282 60225317 -35047334 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1044 378 245 6 25 chr17 60225317 60225441 -35047210 + (TA)n Simple_repeat Simple_repeat 2 124 0 3 1044 204 111 0 0 chr17 60225446 60225482 -35047169 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1044 322 278 0 102 chr17 60225505 60225613 -35047038 + PB1D10 SINE Alu 21 117 0 3 1044 572 200 0 7 chr17 60225621 60225716 -35046935 + (TA)n Simple_repeat Simple_repeat 1 95 0 3 1044 2583 56 12 6 chr17 60225716 60226055 -35046596 - L1Md_F2 LINE L1 -5 6577 6237 3 1044 572 200 0 7 chr17 60226055 60226095 -35046556 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 1044 3392 146 62 19 chr17 60226097 60226713 -35045938 + RLTR26 LTR ERVK 1 642 0 3 1044 362 289 87 10 chr17 60226897 60227093 -35045558 - L1MA6 LINE L1 -49 6251 6041 3 1044 1444 232 10 50 chr17 60227938 60228338 -35044313 - ORR1C2 LTR MaLR 0 384 1 3 1044 277 338 34 55 chr17 60229112 60229350 -35043301 - L1M3e LINE L1 -6751 279 47 3 1044 202 73 49 0 chr17 60229465 60229506 -35043145 + (TAAAA)n Simple_repeat Simple_repeat 2 44 0 3 1044 1170 132 109 13 chr17 60230020 60230040 -35042611 + L1_Mm LINE L1 4923 4942 -941 3 1044 4625 110 6 7 chr17 60230040 60230753 -35041898 - L1_Mus3 LINE L1 0 6638 5927 3 1044 1170 132 109 13 chr17 60230753 60230962 -35041689 + L1_Mm LINE L1 4943 5174 -709 3 1044 1032 154 5 11 chr17 60230960 60231144 -35041507 - Lx2 LINE L1 -403 6594 6412 3 1044 1198 118 11 0 chr17 60231127 60231305 -35041346 + Lx2 LINE L1 6224 6403 -594 3 1044 28 61 0 0 chr17 60231305 60231354 -35041297 + AT_rich Low_complexity Low_complexity 1 49 0 3 1044 5815 79 23 2 chr17 60231521 60232363 -35040288 - L1Md_F2 LINE L1 0 6582 5765 3 1044 577 65 228 0 chr17 60232363 60232455 -35040196 - L1Md_F2 LINE L1 -528 5355 5243 3 1044 17972 61 3 1 chr17 60232452 60235523 -35037128 - L1Md_F3 LINE L1 -1 6583 3505 3 1044 229 329 14 0 chr17 60235924 60235997 -35036654 - ID_B1 SINE B4 -21 203 130 3 1044 25 31 0 0 chr17 60236789 60236821 -35035830 + AT_rich Low_complexity Low_complexity 1 32 0 3 1044 234 0 0 0 chr17 60237353 60237379 -35035272 + (TA)n Simple_repeat Simple_repeat 1 26 0 3 1044 342 390 78 13 chr17 60238347 60238578 -35034073 + L1MB5 LINE L1 5821 6066 -108 3 1044 314 157 36 12 chr17 60238688 60238772 -35033879 + GA-rich Low_complexity Low_complexity 2 87 0 3 1044 222 171 0 0 chr17 60239242 60239283 -35033368 + GA-rich Low_complexity Low_complexity 3 43 0 3 1044 469 68 27 0 chr17 60240505 60240579 -35032072 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 3 1044 701 79 10 0 chr17 60240627 60240728 -35031923 + (TA)n Simple_repeat Simple_repeat 1 102 0 3 1044 266 0 29 0 chr17 60240728 60240761 -35031890 + (GA)n Simple_repeat Simple_repeat 2 36 0 3 1044 202 125 42 0 chr17 60240762 60240810 -35031841 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 3 1044 189 107 0 0 chr17 60242273 60242301 -35030350 + (A)n Simple_repeat Simple_repeat 1 28 0 3 1044 549 0 0 0 chr17 60242481 60242542 -35030109 + (TC)n Simple_repeat Simple_repeat 2 62 0 3 1044 312 91 0 0 chr17 60242932 60242976 -35029675 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1044 50 31 0 0 chr17 60243534 60243598 -35029053 + AT_rich Low_complexity Low_complexity 1 64 0 4 1044 832 238 59 59 chr17 60244015 60244347 -35028304 + Lx7 LINE L1 7364 7695 -1 4 1044 658 303 7 20 chr17 60244534 60244722 -35027929 + B3 SINE B2 29 215 -1 4 1044 358 324 104 15 chr17 60245623 60245883 -35026768 - Lx9 LINE L1 -310 7334 7052 4 1044 781 272 9 5 chr17 60245929 60246143 -35026508 + ORR1C2 LTR MaLR 1 215 -169 4 1044 351 124 44 44 chr17 60246162 60246297 -35026354 + (TCTCTG)n Simple_repeat Simple_repeat 2 136 0 4 1044 761 197 91 123 chr17 60246304 60246524 -35026127 + ORR1C2 LTR MaLR 172 384 0 4 1044 1839 265 37 9 chr17 60246525 60246990 -35025661 + ORR1C2-int LTR MaLR 2 479 -891 4 1044 1956 206 48 8 chr17 60246990 60247387 -35025264 + MTC LTR MaLR 1 413 -8 4 1044 3133 236 19 48 chr17 60247373 60248232 -35024419 + ORR1C2-int LTR MaLR 461 1437 -72 4 1044 1081 189 18 26 chr17 60248232 60248460 -35024191 + URR1A DNA MER1_type 1 226 0 4 1044 3133 224 17 46 chr17 60248460 60248541 -35024110 + ORR1C2-int LTR MaLR 1438 1509 0 4 1044 725 208 14 14 chr17 60248553 60248699 -35023952 + ORR1C2 LTR MaLR 1 146 -238 4 1044 378 0 0 0 chr17 60248700 60248742 -35023909 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1044 182 67 0 82 chr17 60248917 60248966 -35023685 + (TTTAA)n Simple_repeat Simple_repeat 4 48 0 4 1044 237 389 170 28 chr17 60250988 60251311 -35021340 + LTR16B LTR ERVL 92 460 -3 4 1044 321 292 160 24 chr17 60251319 60251607 -35021044 - L1M2 LINE L1 -614 5686 5360 4 1044 501 272 40 13 chr17 60251622 60251849 -35020802 - L1M2 LINE L1 -823 5320 5088 4 1044 462 292 80 16 chr17 60251970 60252158 -35020493 + Lx7 LINE L1 6364 6563 -1133 4 1044 21 0 0 0 chr17 60252780 60252801 -35019850 + AT_rich Low_complexity Low_complexity 1 21 0 4 1044 3552 102 20 18 chr17 60253010 60253560 -35019091 - Lx3_Mus LINE L1 0 7009 6459 4 1044 262 267 103 49 chr17 60254916 60255101 -35017550 + LTR37B LTR ERV1 263 457 -11 4 1044 1481 243 126 11 chr17 60255627 60256081 -35016570 + RMER5 LTR ERV1 29 534 0 4 1044 24 32 0 0 chr17 60256660 60256691 -35015960 + AT_rich Low_complexity Low_complexity 1 31 0 4 1044 231 312 74 49 chr17 60258082 60258244 -35014407 + RLTR23 LTR ERV1 265 430 0 4 1044 1453 68 21 0 chr17 60260249 60260440 -35012211 + B2_Mm2 SINE B2 1 195 0 4 1044 387 0 0 0 chr17 60261808 60261851 -35010800 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1044 342 0 0 0 chr17 60261851 60261888 -35010763 + (GA)n Simple_repeat Simple_repeat 2 39 0 4 1044 21 71 0 0 chr17 60262329 60262371 -35010280 + AT_rich Low_complexity Low_complexity 1 42 0 4 1044 21 36 0 0 chr17 60262525 60262553 -35010098 + AT_rich Low_complexity Low_complexity 1 28 0 4 1044 727 345 46 33 chr17 60262714 60263082 -35009569 + MTE2a LTR MaLR 1 373 -6 4 1044 31 68 0 0 chr17 60263522 60263581 -35009070 + AT_rich Low_complexity Low_complexity 1 59 0 4 1044 265 305 21 0 chr17 60263855 60263950 -35008701 + L1MCb LINE L1 309 405 -6346 4 1044 246 62 0 0 chr17 60264445 60264477 -35008174 + (GAAA)n Simple_repeat Simple_repeat 3 34 0 4 1044 1081 108 6 6 chr17 60264477 60264654 -35007997 + (GGAA)n Simple_repeat Simple_repeat 3 179 0 4 1044 591 302 63 18 chr17 60264901 60265235 -35007416 + L1MCb LINE L1 810 1158 -4887 4 1044 430 31 15 15 chr17 60265585 60265650 -35007001 + (TATAA)n Simple_repeat Simple_repeat 5 69 0 4 1044 306 73 0 0 chr17 60265650 60265691 -35006960 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1044 210 291 0 0 chr17 60266042 60266097 -35006554 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1044 372 197 25 17 chr17 60266735 60266854 -35005797 + (TATG)n Simple_repeat Simple_repeat 1 120 0 4 1044 998 236 47 0 chr17 60266905 60267117 -35005534 + Lx6 LINE L1 6266 6487 -973 4 1044 1594 162 93 13 chr17 60267134 60267435 -35005216 - Lx2 LINE L1 0 6997 6673 4 1044 3517 136 113 8 chr17 60267428 60268058 -35004593 + Lx2 LINE L1 5977 6672 -325 4 1044 2257 252 24 12 chr17 60268114 60268705 -35003946 + Lx7 LINE L1 6609 7206 -490 4 1044 378 175 0 0 chr17 60268705 60268785 -35003866 + (TA)n Simple_repeat Simple_repeat 1 80 0 4 1044 922 26 0 0 chr17 60268785 60268900 -35003751 - B1_Mm SINE Alu -1 146 32 4 1044 791 206 23 34 chr17 60268900 60269076 -35003575 + Lx7 LINE L1 7523 7696 0 4 1044 263 278 117 7 chr17 60269205 60269350 -35003301 - L1MD3 LINE L1 -2012 5983 5823 4 1044 263 174 54 11 chr17 60269459 60269552 -35003099 + (TA)n Simple_repeat Simple_repeat 2 98 0 4 1044 47 44 0 0 chr17 60271296 60271364 -35001287 + AT_rich Low_complexity Low_complexity 1 68 0 4 1044 298 316 51 34 chr17 60271895 60272013 -35000638 + ID_B1 SINE B4 91 210 -14 4 1044 920 35 9 0 chr17 60272020 60272136 -35000515 + (GGAAA)n Simple_repeat Simple_repeat 3 119 0 4 1044 335 318 127 0 chr17 60273578 60273688 -34998963 - ID_B1 SINE B4 0 224 101 4 1044 261 289 94 22 chr17 60273933 60274071 -34998580 + MER58D DNA MER1_type 237 384 -2 4 1044 922 213 75 0 chr17 60274221 60274409 -34998242 - Lx9 LINE L1 -682 6962 6761 4 1044 711 198 264 4 chr17 60274410 60274529 -34998122 + Lx9 LINE L1 7324 7472 -172 4 1044 417 86 0 0 chr17 60274529 60274587 -34998064 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 1044 711 198 264 4 chr17 60274587 60274721 -34997930 + Lx9 LINE L1 7473 7642 -2 4 1044 1983 133 33 207 chr17 60274922 60275443 -34997208 - RLTR23 LTR ERV1 0 430 1 4 1044 226 279 16 16 chr17 60275509 60275571 -34997080 - B1_Mus2 SINE Alu -67 80 19 4 1044 216 101 53 53 chr17 60276110 60276204 -34996447 + (TTAA)n Simple_repeat Simple_repeat 1 94 0 4 1044 23 78 0 0 chr17 60276399 60276450 -34996201 + AT_rich Low_complexity Low_complexity 1 51 0 4 1044 6013 40 0 0 chr17 60277032 60277754 -34994897 - L1Md_T LINE L1 -1 6581 5860 4 1044 246 32 0 0 chr17 60277923 60277954 -34994697 + (T)n Simple_repeat Simple_repeat 1 31 0 4 1044 339 364 32 38 chr17 60278003 60278160 -34994491 + B3A SINE B2 9 164 -34 4 1044 288 0 0 0 chr17 60278295 60278327 -34994324 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1044 329 339 8 0 chr17 60278604 60278722 -34993929 - Lx7 LINE L1 -397 7299 7181 4 1044 518 293 55 20 chr17 60278836 60279038 -34993613 - Lx7 LINE L1 -1295 6401 6193 4 1044 238 261 0 0 chr17 60279092 60279161 -34993490 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 4 1044 3579 164 45 19 chr17 60279209 60279894 -34992757 + RLTR25A LTR ERVK 1 703 -400 4 1044 481 251 8 99 chr17 60279914 60280158 -34992493 + L1VL1 LINE L1 49 382 -6040 4 1044 20967 160 56 5 chr17 60280211 60285273 -34987378 + L1_Mus1 LINE L1 1240 6567 0 4 1044 1963 178 74 13 chr17 60285277 60285670 -34986981 + RLTR25A LTR ERVK 687 1103 0 4 1044 247 258 38 85 chr17 60286793 60286899 -34985752 + RMER2 LTR ERV1 439 539 -28 4 1044 571 347 39 34 chr17 60286943 60287176 -34985475 + B4A SINE B4 37 270 -22 4 1044 1391 255 65 17 chr17 60288202 60288713 -34983938 + Lx7 LINE L1 5478 6052 -1592 4 1044 244 268 23 16 chr17 60288806 60288935 -34983716 + (TA)n Simple_repeat Simple_repeat 2 131 0 4 1044 248 53 26 0 chr17 60288965 60289003 -34983648 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 1044 669 276 143 6 chr17 60289007 60289182 -34983469 - ID_B1 SINE B4 -14 210 12 4 1044 538 309 59 82 chr17 60289201 60289627 -34983024 - L1M2 LINE L1 -841 5302 4887 4 1044 355 319 60 75 chr17 60289645 60289913 -34982738 + L1M2 LINE L1 4216 4479 -1664 4 1044 308 312 63 25 chr17 60290500 60290658 -34981993 - L1MEc LINE L1 -6182 218 55 4 1044 3552 208 27 7 chr17 60290733 60291435 -34981216 - Lx2B LINE L1 -169 6831 6116 4 1044 2884 202 50 11 chr17 60291436 60292286 -34980365 + Lx2B LINE L1 5229 6104 -896 4 1044 3052 163 71 31 chr17 60292360 60293012 -34979639 + RMER6C LTR ERVK 11 688 -2 4 1045 834 79 175 0 chr17 60293264 60293390 -34979261 + B1_Mus1 SINE Alu 1 148 0 4 1045 182 164 18 0 chr17 60293411 60293466 -34979185 + (CAAA)n Simple_repeat Simple_repeat 2 57 0 4 1045 199 286 0 0 chr17 60294361 60294410 -34978241 + L4 LINE RTE 1405 1453 -576 4 1045 1588 77 21 29 chr17 60294612 60294853 -34977798 + L1_Mus2 LINE L1 6328 6566 0 4 1045 2951 159 15 53 chr17 60294858 60295447 -34977204 + L1_Mur2 LINE L1 4323 4889 -988 4 1045 283 163 4 0 chr17 60295968 60296016 -34976635 - B1F SINE Alu -34 115 66 4 1045 2018 137 68 0 chr17 60296658 60297009 -34975642 - Lx2 LINE L1 -1 6996 6622 4 1045 239 308 0 71 chr17 60297087 60297108 -34975543 + tRNA-Ala-GCA tRNA tRNA 4 24 -51 4 1045 4053 46 8 4 chr17 60297108 60297609 -34975042 - RLTR1C LTR ERV1 0 503 1 4 1045 239 308 0 71 chr17 60297609 60297657 -34974994 + tRNA-Ala-GCA tRNA tRNA 25 68 -7 4 1045 303 28 0 0 chr17 60297790 60297826 -34974825 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1045 441 0 0 0 chr17 60297826 60297874 -34974777 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 1045 186 118 0 0 chr17 60297989 60298023 -34974628 + (TCTCTG)n Simple_repeat Simple_repeat 3 36 0 4 1045 462 159 0 0 chr17 60298020 60298108 -34974543 + CT-rich Low_complexity Low_complexity 2 89 0 4 1045 393 39 0 0 chr17 60298263 60298314 -34974337 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1045 224 357 0 0 chr17 60298314 60298384 -34974267 + (CATA)n Simple_repeat Simple_repeat 4 73 0 4 1045 318 348 66 7 chr17 60298511 60298647 -34974004 + B1F SINE Alu 5 148 -1 4 1045 2465 64 154 3 chr17 60298777 60299122 -34973529 + MTB LTR MaLR 4 400 0 4 1045 27 62 0 0 chr17 60299680 60299728 -34972923 + AT_rich Low_complexity Low_complexity 1 48 0 4 1045 342 0 0 0 chr17 60299736 60299774 -34972877 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1045 759 105 0 0 chr17 60299962 60300095 -34972556 + (TC)n Simple_repeat Simple_repeat 1 133 0 4 1045 279 0 0 0 chr17 60300095 60300125 -34972526 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 1045 211 152 0 0 chr17 60300132 60300165 -34972486 - PB1D9 SINE Alu -39 81 49 4 1045 232 333 0 0 chr17 60300486 60300555 -34972096 - Lx7 LINE L1 -1790 5906 5838 4 1045 26 0 0 0 chr17 60300822 60300848 -34971803 + AT_rich Low_complexity Low_complexity 1 26 0 4 1045 605 97 0 10 chr17 60301287 60301391 -34971260 + (TA)n Simple_repeat Simple_repeat 2 104 0 4 1045 4193 171 25 23 chr17 60301919 60302707 -34969944 + Lx4A LINE L1 6132 6921 -137 4 1045 399 21 0 0 chr17 60302708 60302756 -34969895 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1045 276 246 142 50 chr17 60303194 60303302 -34969349 + Lx4A LINE L1 6917 7039 -19 4 1045 348 83 0 0 chr17 60303302 60303350 -34969301 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 4 1045 276 246 142 50 chr17 60303350 60303361 -34969290 + Lx4A LINE L1 7040 7047 -11 4 1045 600 14 0 0 chr17 60303488 60303557 -34969094 + (TA)n Simple_repeat Simple_repeat 1 69 0 4 1045 282 29 0 0 chr17 60303609 60303644 -34969007 + (TC)n Simple_repeat Simple_repeat 2 36 0 5 1045 189 0 0 0 chr17 60303644 60303664 -34968987 + (TA)n Simple_repeat Simple_repeat 2 22 0 5 1045 2418 193 64 20 chr17 60303690 60303956 -34968695 + RLTR28 LTR ERVL 1 270 -254 5 1045 2159 101 3 77 chr17 60303956 60304309 -34968342 + ORR1A2 LTR MaLR 1 327 0 5 1045 2418 193 64 20 chr17 60304309 60304514 -34968137 + RLTR28 LTR ERVL 271 491 -33 5 1045 2877 58 84 0 chr17 60304514 60304893 -34967758 - IAPLTR2a LTR ERVK 0 411 1 5 1045 2418 193 64 20 chr17 60304893 60304922 -34967729 + RLTR28 LTR ERVL 492 523 -1 5 1045 279 0 0 0 chr17 60305065 60305096 -34967555 + (T)n Simple_repeat Simple_repeat 1 31 0 5 1045 632 286 25 53 chr17 60306368 60306421 -34966230 + Lx9 LINE L1 4936 4985 -862 5 1045 2523 62 0 26 chr17 60306421 60306766 -34965885 + L1Md_F2 LINE L1 6247 6582 0 5 1045 632 286 25 53 chr17 60306766 60306993 -34965658 + Lx9 LINE L1 4986 5208 -639 5 1045 3283 180 103 82 chr17 60306993 60307858 -34964793 - RMER19B LTR ERVK -19 883 1 5 1045 480 289 43 75 chr17 60307886 60307961 -34964690 + Lx9 LINE L1 5344 5416 -431 5 1045 324 48 0 0 chr17 60307961 60308003 -34964648 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 5 1045 480 289 43 75 chr17 60308003 60308181 -34964470 + Lx9 LINE L1 5417 5589 -258 5 1045 540 246 8 15 chr17 60308180 60308312 -34964339 + Lx9 LINE L1 5844 5974 -1670 5 1045 1321 99 5 5 chr17 60308324 60308517 -34964134 + B2_Mm2 SINE B2 2 194 -1 5 1045 23 54 0 0 chr17 60309260 60309297 -34963354 + AT_rich Low_complexity Low_complexity 1 37 0 5 1045 680 89 0 10 chr17 60309975 60310017 -34962634 + (TC)n Simple_repeat Simple_repeat 1 42 0 5 1045 1184 101 6 0 chr17 60310017 60310195 -34962456 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 5 1045 680 89 0 10 chr17 60310195 60310254 -34962397 + (TC)n Simple_repeat Simple_repeat 2 60 0 5 1045 1149 192 41 20 chr17 60310306 60310599 -34962052 - RMER17A LTR ERVK -16 735 437 5 1045 4515 110 7 98 chr17 60310885 60311009 -34961642 + Lx LINE L1 5910 5970 -684 5 1045 579 15 0 0 chr17 60311009 60311077 -34961574 + (GAA)n Simple_repeat Simple_repeat 1 68 0 5 1045 4515 110 7 98 chr17 60311077 60311759 -34960892 + Lx LINE L1 5971 6643 -11 5 1045 288 0 0 0 chr17 60311759 60311791 -34960860 + (TAGA)n Simple_repeat Simple_repeat 4 35 0 5 1045 240 111 0 0 chr17 60313147 60313183 -34959468 + (TAA)n Simple_repeat Simple_repeat 1 36 0 5 1045 4327 68 2 3 chr17 60313265 60313829 -34958822 + L1Md_F2 LINE L1 6016 6578 -4 5 1045 32 43 0 0 chr17 60313837 60313883 -34958768 + AT_rich Low_complexity Low_complexity 1 46 0 5 1045 244 306 0 0 chr17 60316669 60316754 -34955897 - L1ME2 LINE L1 -166 5998 5914 5 1045 534 70 0 0 chr17 60317024 60317095 -34955556 + (TTA)n Simple_repeat Simple_repeat 1 71 0 5 1045 4867 26 3 7 chr17 60317184 60317764 -34954887 - L1Md_F3 LINE L1 -2 6582 6005 5 1045 213 200 0 0 chr17 60317774 60317819 -34954832 + (TTTG)n Simple_repeat Simple_repeat 4 48 0 5 1045 21 0 0 0 chr17 60319254 60319275 -34953376 + AT_rich Low_complexity Low_complexity 1 21 0 5 1045 24 0 0 0 chr17 60319927 60319951 -34952700 + AT_rich Low_complexity Low_complexity 1 24 0 5 1045 44 46 0 0 chr17 60320001 60320066 -34952585 + AT_rich Low_complexity Low_complexity 1 65 0 5 1045 204 97 0 0 chr17 60320467 60320498 -34952153 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 5 1045 22 0 0 0 chr17 60321195 60321217 -34951434 + AT_rich Low_complexity Low_complexity 1 22 0 5 1045 871 156 0 11 chr17 60321618 60321799 -34950852 + CT-rich Low_complexity Low_complexity 2 180 0 5 1045 26 0 0 0 chr17 60321822 60321848 -34950803 + AT_rich Low_complexity Low_complexity 1 26 0 5 1045 31 0 0 0 chr17 60322614 60322645 -34950006 + AT_rich Low_complexity Low_complexity 1 31 0 5 1045 522 0 0 0 chr17 60322831 60322889 -34949762 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 1045 437 305 8 8 chr17 60322910 60323029 -34949622 - RSINE1 SINE B4 -34 131 13 5 1045 367 68 0 0 chr17 60323189 60323233 -34949418 - L1Md_F3 LINE L1 -571 6013 5970 5 1045 613 289 14 34 chr17 60323227 60323435 -34949216 + Lx6 LINE L1 7230 7433 -27 5 1045 312 27 0 0 chr17 60324021 60324058 -34948593 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 5 1045 3184 178 36 16 chr17 60324100 60324711 -34947940 - Lx2 LINE L1 -1 6996 6374 5 1045 1949 241 73 34 chr17 60326753 60327286 -34945365 - RMER15 LTR ERVL 0 575 22 5 1045 247 149 132 15 chr17 60327311 60327379 -34945272 - RMER15 LTR ERVL -488 87 12 5 1045 833 132 0 40 chr17 60327503 60327653 -34944998 - L1_Mm LINE L1 -1868 4015 3872 5 1045 3054 120 6 11 chr17 60327653 60328126 -34944525 + Lx LINE L1 6166 6636 -18 5 1045 468 0 0 0 chr17 60328594 60328646 -34944005 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 5 1045 523 278 31 68 chr17 60330416 60330578 -34942073 - RSINE1 SINE B4 -2 163 8 5 1045 441 0 0 0 chr17 60331637 60331686 -34940965 + (TC)n Simple_repeat Simple_repeat 2 50 0 5 1045 489 17 0 0 chr17 60331686 60331743 -34940908 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 1045 409 315 81 49 chr17 60332482 60332759 -34939892 - Lx8 LINE L1 -778 6695 6413 5 1045 567 0 0 0 chr17 60332759 60332822 -34939829 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 1045 409 315 81 49 chr17 60332822 60332851 -34939800 - Lx8 LINE L1 -1061 6412 6380 5 1045 3569 181 42 1 chr17 60332999 60333687 -34938964 - RMER6D LTR ERVK -4 716 1 5 1045 249 233 41 0 chr17 60333690 60333763 -34938888 + Lx8 LINE L1 6745 6820 -653 5 1045 207 65 43 21 chr17 60334446 60334493 -34938158 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 1045 225 0 0 0 chr17 60335055 60335080 -34937571 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 5 1045 667 173 19 32 chr17 60335085 60335240 -34937411 - RMER1A Other Other -14 1016 864 5 1045 304 253 33 54 chr17 60335237 60335329 -34937322 - RMER1A Other Other -564 466 377 5 1045 2781 50 0 14 chr17 60335378 60335743 -34936908 - L1Md_F2 LINE L1 0 6582 6223 5 1045 646 131 10 0 chr17 60335743 60335842 -34936809 + L1Md_F LINE L1 816 915 -5604 5 1045 1220 317 45 104 chr17 60335797 60336506 -34936145 - RMER1B Other Other -506 560 1 5 1045 2383 155 27 2 chr17 60336889 60337189 -34935462 + Lx3_Mus LINE L1 6578 6877 -132 5 1045 396 0 0 0 chr17 60337189 60337233 -34935418 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1045 2383 155 27 2 chr17 60337233 60337333 -34935318 + Lx3_Mus LINE L1 6878 6988 -21 5 1045 342 0 0 0 chr17 60337334 60337372 -34935279 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 5 1045 2557 159 21 6 chr17 60338620 60339089 -34933562 - Lx LINE L1 -1 6653 6178 5 1045 397 181 108 0 chr17 60339094 60339177 -34933474 + ORR1D2 LTR MaLR 279 370 0 5 1045 187 119 0 69 chr17 60339760 60339832 -34932819 + (TA)n Simple_repeat Simple_repeat 1 67 0 5 1045 181 75 24 24 chr17 60339872 60339913 -34932738 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 5 1045 2266 274 144 33 chr17 60340306 60341284 -34931367 - Lx7 LINE L1 0 7696 6610 5 1045 1097 263 32 7 chr17 60341288 60341452 -34931199 - L1_Mur3 LINE L1 -4513 1367 1189 5 1045 210 37 0 0 chr17 60341452 60341479 -34931172 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1045 1097 268 74 24 chr17 60341479 60341642 -34931009 - L1_Mur3 LINE L1 -6540 1188 1011 5 1045 534 57 0 0 chr17 60341642 60341712 -34930939 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 5 1045 1097 268 74 24 chr17 60341712 60341865 -34930786 - L1_Mur3 LINE L1 -6718 1010 864 5 1045 317 321 30 0 chr17 60342253 60342384 -34930267 - L1_Mur3 LINE L1 -6898 830 696 5 1045 1880 179 132 93 chr17 60342683 60343347 -34929304 + RMER6C LTR ERVK 1 690 0 5 1045 225 65 0 0 chr17 60343412 60343443 -34929208 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1045 390 129 0 0 chr17 60343535 60343597 -34929054 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 1045 1066 97 7 0 chr17 60343597 60343742 -34928909 - B1_Mus1 SINE Alu -2 146 1 5 1045 24 0 0 0 chr17 60344012 60344036 -34928615 + AT_rich Low_complexity Low_complexity 1 24 0 5 1045 295 236 0 0 chr17 60345009 60345081 -34927570 - Lx9 LINE L1 -7 7637 7566 5 1045 369 0 0 0 chr17 60345088 60345129 -34927522 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1045 194 116 23 0 chr17 60345791 60345834 -34926817 + (CAAA)n Simple_repeat Simple_repeat 4 47 0 5 1045 806 83 8 0 chr17 60346073 60346193 -34926458 + (TTTC)n Simple_repeat Simple_repeat 4 124 0 5 1045 192 27 53 26 chr17 60347040 60347078 -34925573 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 5 1045 306 330 19 0 chr17 60347163 60347269 -34925382 + MTE2b LTR MaLR 5 112 -267 5 1045 2156 174 83 38 chr17 60347318 60347813 -34924838 + RLTR20B3 LTR ERVK 21 537 -40 5 1045 28 0 0 0 chr17 60347813 60347841 -34924810 + AT_rich Low_complexity Low_complexity 1 28 0 5 1045 616 277 75 17 chr17 60347842 60348081 -34924570 - Lx8 LINE L1 -22 7451 7199 5 1045 1372 311 13 13 chr17 60348492 60348889 -34923762 - MTD LTR MaLR 0 419 23 5 1045 22 35 0 0 chr17 60351345 60351374 -34921277 + AT_rich Low_complexity Low_complexity 1 29 0 5 1045 1434 175 348 5 chr17 60352286 60352436 -34920215 + ORR1C1 LTR MaLR 1 205 -173 5 1045 1913 34 4 4 chr17 60352436 60352673 -34919978 - L1Md_F3 LINE L1 -2 6582 6346 5 1045 1434 175 41 7 chr17 60352673 60352841 -34919810 + ORR1C1 LTR MaLR 206 375 -3 5 1045 21 0 0 0 chr17 60352841 60352862 -34919789 + AT_rich Low_complexity Low_complexity 1 21 0 5 1045 212 331 32 96 chr17 60353497 60353654 -34918997 + B3 SINE B2 60 206 -10 5 1045 1071 53 0 0 chr17 60353798 60353931 -34918720 + B1_Mus1 SINE Alu 2 134 -14 5 1045 431 0 37 0 chr17 60353931 60353985 -34918666 + (CAAAA)n Simple_repeat Simple_repeat 5 60 0 5 1045 700 158 13 13 chr17 60354080 60354234 -34918417 + Lx LINE L1 6501 6654 0 5 1045 592 199 24 0 chr17 60354290 60354326 -34918325 + Lx9 LINE L1 7468 7503 -141 5 1045 303 28 0 0 chr17 60354326 60354362 -34918289 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1045 592 199 24 0 chr17 60354362 60354491 -34918160 + Lx9 LINE L1 7504 7636 -8 5 1045 21 71 0 0 chr17 60354613 60354655 -34917996 + AT_rich Low_complexity Low_complexity 1 42 0 5 1045 249 33 0 0 chr17 60354826 60354856 -34917795 + (A)n Simple_repeat Simple_repeat 1 30 0 5 1045 551 156 21 0 chr17 60355559 60355655 -34916996 - L1_Mur2 LINE L1 -3129 2748 2651 5 1045 604 143 54 217 chr17 60355654 60355762 -34916889 + Lx3A LINE L1 3805 3925 -1952 5 1045 1078 54 0 33 chr17 60355762 60355914 -34916737 + B1_Mm SINE Alu 1 147 0 5 1045 604 143 54 217 chr17 60355914 60356082 -34916569 + Lx3A LINE L1 3926 4036 -1841 5 1045 3307 195 70 111 chr17 60356078 60357121 -34915530 + Lx3A LINE L1 4281 5280 -597 5 1045 2352 116 43 36 chr17 60357114 60357534 -34915117 + Lx3A LINE L1 5757 6179 -830 5 1045 3860 128 51 2 chr17 60357533 60358144 -34914507 + Lx3A LINE L1 6316 6956 -25 5 1045 1061 58 7 0 chr17 60358385 60358522 -34914129 + B1_Mus1 SINE Alu 11 148 0 5 1045 8672 83 3 13 chr17 60359029 60359706 -34912945 - L1_Mus2 LINE L1 -446 6120 5452 5 1045 4057 11 0 0 chr17 60359706 60360167 -34912484 - L1Md_A LINE L1 0 6582 6122 6 1045 8672 139 14 5 chr17 60360167 60361145 -34911506 - L1_Mus2 LINE L1 -432 5451 4458 5 1045 3355 99 6 54 chr17 60361146 60361741 -34910910 + L1_Mus3 LINE L1 6125 6638 0 6 1045 548 285 11 78 chr17 60361776 60361937 -34910714 + B3 SINE B2 45 196 -20 6 1045 815 0 11 0 chr17 60361937 60362032 -34910619 + (TCTA)n Simple_repeat Simple_repeat 1 96 0 6 1045 548 285 11 78 chr17 60362032 60362049 -34910602 + B3 SINE B2 197 211 -5 6 1045 43 64 0 0 chr17 60363675 60363753 -34908898 + AT_rich Low_complexity Low_complexity 1 78 0 6 1045 438 69 0 0 chr17 60363811 60363869 -34908782 + (TG)n Simple_repeat Simple_repeat 2 59 0 6 1045 3819 263 74 37 chr17 60363871 60364039 -34908612 - Lx9 LINE L1 -154 7490 7319 6 1045 248 0 31 0 chr17 60364039 60364071 -34908580 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 6 1045 3819 263 74 37 chr17 60364071 60365159 -34907492 - Lx9 LINE L1 -326 7318 6187 6 1045 22 35 0 0 chr17 60365159 60365188 -34907463 + AT_rich Low_complexity Low_complexity 1 29 0 6 1045 454 265 175 44 chr17 60365336 60365454 -34907197 + L1MA4 LINE L1 5551 5666 -634 6 1045 434 18 18 0 chr17 60365454 60365509 -34907142 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 1045 454 265 175 44 chr17 60365509 60365733 -34906918 + L1MA4 LINE L1 5667 5938 -362 6 1045 4952 67 3 8 chr17 60367270 60367932 -34904719 + L1Md_F2 LINE L1 5922 6580 -2 6 1045 1180 35 0 0 chr17 60368180 60368322 -34904329 - L1Md_T LINE L1 -299 6283 6142 6 1045 2242 59 0 0 chr17 60368322 60368610 -34904041 + L1Md_F2 LINE L1 6291 6578 -4 6 1045 1894 273 146 10 chr17 60368618 60369207 -34903444 - Lx6 LINE L1 -26 7434 6766 6 1045 266 288 63 28 chr17 60369261 60369404 -34903247 - L1MD LINE L1 -465 5777 5630 6 1045 213 234 10 78 chr17 60369508 60369610 -34903041 + CT-rich Low_complexity Low_complexity 1 95 0 6 1045 304 269 154 47 chr17 60369813 60370297 -34902354 - L1MDa LINE L1 -323 6242 5690 6 1045 324 264 60 40 chr17 60370712 60370862 -34901789 - L1MDa LINE L1 -3237 3300 3148 6 1045 839 309 47 25 chr17 60371035 60371548 -34901103 - L1MDa LINE L1 -3549 2988 2454 6 1045 2331 197 106 34 chr17 60372548 60373115 -34899536 + Lx4B LINE L1 6396 7003 -55 6 1045 195 42 0 0 chr17 60373137 60373161 -34899490 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 6 1045 884 41 8 0 chr17 60373244 60373365 -34899286 + (TC)n Simple_repeat Simple_repeat 1 122 0 6 1045 201 39 0 0 chr17 60373366 60373392 -34899259 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 1045 386 306 32 24 chr17 60373402 60373526 -34899125 - RSINE1 SINE B4 -37 128 4 6 1045 563 103 0 10 chr17 60375688 60375786 -34896865 + (CA)n Simple_repeat Simple_repeat 2 98 0 6 1045 1418 0 15 10 chr17 60375870 60376075 -34896576 + (TCTA)n Simple_repeat Simple_repeat 1 206 0 6 1045 1446 8 17 8 chr17 60376095 60376337 -34896314 + (TCTA)n Simple_repeat Simple_repeat 1 244 0 6 1045 433 338 76 32 chr17 60377387 60377702 -34894949 + MamRep605 Unknown Unknown 389 717 -159 6 1045 1929 217 14 2 chr17 60378003 60378419 -34894232 + MTC LTR MaLR 1 421 0 6 1045 1104 301 55 99 chr17 60378690 60379582 -34893069 + MTC-int LTR MaLR 124 1056 -202 6 1045 695 289 32 37 chr17 60379684 60379753 -34892898 + MTD LTR MaLR 1 67 -352 6 1045 2261 32 18 0 chr17 60379753 60380030 -34892621 + L1Md_F3 LINE L1 6289 6570 -14 6 1045 695 289 32 37 chr17 60380030 60380176 -34892475 + MTD LTR MaLR 68 215 -204 6 1045 1160 264 24 21 chr17 60381245 60381574 -34891077 + Lx6 LINE L1 7118 7447 -13 6 1045 1422 177 135 21 chr17 60381689 60382067 -34890584 - MTC LTR MaLR 0 421 17 6 1045 319 319 31 57 chr17 60382067 60382260 -34890391 - Lx6 LINE L1 -43 7417 7230 6 1045 349 208 0 14 chr17 60382261 60382334 -34890317 - MTC LTR MaLR -340 81 10 6 1045 1842 251 118 24 chr17 60383061 60383645 -34889006 + Lx6 LINE L1 6822 7460 0 6 1045 31 26 0 0 chr17 60385409 60385447 -34887204 + AT_rich Low_complexity Low_complexity 1 38 0 6 1045 572 303 10 50 chr17 60386027 60386225 -34886426 - B4A SINE B4 -55 237 48 6 1045 21 89 0 0 chr17 60387313 60387369 -34885282 + AT_rich Low_complexity Low_complexity 1 56 0 6 1045 2015 44 0 4 chr17 60387395 60387647 -34885004 - L1Md_F3 LINE L1 -3 6581 6331 6 1045 448 154 9 9 chr17 60387733 60387838 -34884813 + (TA)n Simple_repeat Simple_repeat 1 105 0 6 1045 180 0 0 0 chr17 60387838 60387858 -34884793 + (TG)n Simple_repeat Simple_repeat 2 21 0 6 1045 337 247 349 43 chr17 60387858 60388073 -34884578 - Lx8 LINE L1 -156 7317 7037 6 1045 711 0 0 0 chr17 60388074 60388153 -34884498 + (TCC)n Simple_repeat Simple_repeat 2 80 0 6 1045 548 291 44 39 chr17 60388211 60388415 -34884236 + L1_Rod LINE L1 5548 5752 -95 6 1045 3132 201 15 29 chr17 60388594 60389256 -34883395 - Lx2B LINE L1 -3 6997 6345 6 1045 617 323 49 21 chr17 60389572 60389857 -34882794 + LTRIS4 LTR ERV1 215 507 0 6 1045 1962 229 2 0 chr17 60389857 60390255 -34882396 + Lx2 LINE L1 5967 6365 -632 6 1045 112 8 0 0 chr17 60390260 60390379 -34882272 + AT_rich Low_complexity Low_complexity 1 119 0 6 1045 272 268 0 14 chr17 60390403 60390475 -34882176 - Lx7 LINE L1 -1449 6247 6177 6 1045 488 304 85 80 chr17 60390548 60390918 -34881733 - RMER20B LTR ERVK -45 471 90 6 1045 2074 138 65 3 chr17 60391233 60391605 -34881046 + L1_Mur1 LINE L1 2377 2771 -3115 6 1045 24 32 0 0 chr17 60391628 60391659 -34880992 + AT_rich Low_complexity Low_complexity 1 31 0 6 1045 1059 165 5 37 chr17 60391659 60391873 -34880778 - Lx3A LINE L1 -2 6979 6773 6 1045 545 291 28 74 chr17 60391874 60392089 -34880562 - MERVK26-int LTR ERVK -3212 3707 3503 6 1045 1484 116 0 0 chr17 60392351 60392575 -34880076 - L1_Mur2 LINE L1 -1682 4195 3972 6 1045 342 111 16 0 chr17 60392575 60392638 -34880013 + Lx LINE L1 6585 6648 -6 6 1045 2278 234 8 18 chr17 60392640 60393149 -34879502 - MERVK26-int LTR ERVK -3641 3278 2775 6 1045 567 105 0 0 chr17 60393153 60393248 -34879403 + ORR1A3 LTR MaLR 4 98 -228 6 1045 318 134 0 0 chr17 60393559 60393626 -34879025 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 6 1045 192 125 0 0 chr17 60393742 60393774 -34878877 + (TTC)n Simple_repeat Simple_repeat 1 32 0 6 1045 264 308 112 62 chr17 60394059 60394364 -34878287 - RMER20B LTR ERVK -216 411 92 6 1045 755 298 43 29 chr17 60394462 60394808 -34877843 - Lx7 LINE L1 -1506 6190 5840 6 1045 3452 185 2 13 chr17 60394848 60395004 -34877647 - RMER6A LTR ERVK -4 752 636 6 1045 3274 41 5 2 chr17 60395004 60395399 -34877252 + MTA_Mm LTR MaLR 1 396 0 6 1045 3452 201 9 29 chr17 60395399 60396050 -34876601 - RMER6A LTR ERVK -111 645 1 6 1045 510 220 46 0 chr17 60396232 60396341 -34876310 + MTEa LTR MaLR 107 220 -159 6 1045 686 262 27 22 chr17 60396363 60396546 -34876105 + B3 SINE B2 7 190 -26 6 1045 568 209 85 0 chr17 60396546 60396675 -34875976 + B1_Mur4 SINE Alu 11 150 0 6 1045 441 292 73 56 chr17 60396791 60396969 -34875682 + MTEa LTR MaLR 199 379 0 6 1045 732 201 0 22 chr17 60397198 60397335 -34875316 - B1_Mm SINE Alu -13 134 1 6 1045 25 0 0 0 chr17 60398035 60398060 -34874591 + AT_rich Low_complexity Low_complexity 1 25 0 6 1045 13738 98 12 2 chr17 60398699 60400002 -34872649 - L1_Mus3 LINE L1 0 6638 5363 6 1045 297 0 0 0 chr17 60400002 60400035 -34872616 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 6 1045 13738 128 27 5 chr17 60400035 60401703 -34870948 - L1_Mus3 LINE L1 -521 5362 3645 6 1045 615 27 0 0 chr17 60401913 60401986 -34870665 + (GA)n Simple_repeat Simple_repeat 2 74 0 6 1045 1046 105 0 0 chr17 60403074 60403217 -34869434 - B1_Mus1 SINE Alu -5 143 1 6 1045 22 35 0 0 chr17 60403380 60403409 -34869242 + AT_rich Low_complexity Low_complexity 1 29 0 6 1045 325 227 284 19 chr17 60403743 60403954 -34868697 - Lx9 LINE L1 -6 7638 7372 6 1045 4372 113 35 12 chr17 60403980 60404661 -34867990 - L1_Mus4 LINE L1 -6 6630 5934 6 1045 2918 106 11 1 chr17 60404661 60405196 -34867455 + L1_Mus4 LINE L1 5416 5955 -681 6 1045 235 284 0 78 chr17 60405203 60405306 -34867345 - Lx9 LINE L1 -268 7376 7282 6 1045 210 256 0 0 chr17 60406704 60406747 -34865904 + GA-rich Low_complexity Low_complexity 2 44 0 6 1045 201 74 0 0 chr17 60407046 60407073 -34865578 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 6 1045 25 0 0 0 chr17 60407073 60407098 -34865553 + AT_rich Low_complexity Low_complexity 1 25 0 6 1045 279 169 68 0 chr17 60408513 60408572 -34864079 + MLT1K LTR MaLR 507 569 -26 6 1045 293 89 0 22 chr17 60409156 60409202 -34863449 - ORR1A3 LTR MaLR -11 318 274 6 1045 246 95 0 0 chr17 60409202 60409244 -34863407 + (T)n Simple_repeat Simple_repeat 1 42 0 6 1045 38302 39 2 7 chr17 60409251 60415408 -34857243 - L1Md_T LINE L1 -1 6581 463 6 1045 1459 161 13 65 chr17 60415408 60415714 -34856937 - ORR1A3 LTR MaLR -36 290 1 6 1045 507 108 0 0 chr17 60415972 60416065 -34856586 + (TTA)n Simple_repeat Simple_repeat 2 94 0 6 1045 1002 99 7 0 chr17 60416068 60416210 -34856441 - B1_Mus1 SINE Alu -4 144 2 6 1045 327 291 67 77 chr17 60417054 60417307 -34855344 - MLT1E1 LTR MaLR -57 623 366 6 1045 365 354 91 77 chr17 60417736 60418100 -34854551 - ORR1D2 LTR MaLR -1 369 1 6 1045 206 103 51 0 chr17 60418345 60418384 -34854267 + T-rich Low_complexity Low_complexity 4 44 0 6 1045 23 54 0 0 chr17 60418505 60418542 -34854109 + AT_rich Low_complexity Low_complexity 1 37 0 6 1045 623 165 8 25 chr17 60418902 60419020 -34853631 - B1_Mus1 SINE Alu 0 148 33 6 1045 225 0 0 0 chr17 60419120 60419145 -34853506 + (TA)n Simple_repeat Simple_repeat 2 26 0 6 1045 1530 50 0 0 chr17 60419145 60419326 -34853325 - B2_Mm1t SINE B2 -11 182 2 6 1045 1475 146 0 0 chr17 60419357 60419604 -34853047 - L1_Mus3 LINE L1 -530 6108 5862 6 1045 21 0 0 0 chr17 60419648 60419669 -34852982 + AT_rich Low_complexity Low_complexity 1 21 0 6 1045 1304 101 93 78 chr17 60419669 60419891 -34852760 - L1_Mus2 LINE L1 0 6566 6347 6 1045 225 0 0 0 chr17 60419891 60419916 -34852735 + (TGGGGG)n Simple_repeat Simple_repeat 1 25 0 6 1045 1304 101 93 78 chr17 60419916 60419950 -34852701 - L1_Mus2 LINE L1 -220 6346 6307 6 1045 1579 81 77 0 chr17 60419948 60420170 -34852481 - L1_Mus2 LINE L1 -372 6194 5956 6 1045 7453 75 18 6 chr17 60420173 60421837 -34850814 - L1Md_F2 LINE L1 0 6582 4898 6 1045 7233 79 12 3 chr17 60421825 60422823 -34849828 + L1Md_F2 LINE L1 3895 4901 -982 6 1045 4400 122 26 4 chr17 60422819 60423664 -34848987 - L1_Mus3 LINE L1 -594 5972 5099 6 1045 3137 119 31 4 chr17 60423665 60424173 -34848478 + L1_Mus3 LINE L1 6117 6638 0 6 1046 4937 143 44 68 chr17 60424612 60425835 -34846816 + RLTR13C1 LTR ERVK 1 1114 0 6 1046 317 296 80 80 chr17 60427217 60427404 -34845247 + L1MDa LINE L1 1994 2180 -4453 6 1046 31087 34 1 0 chr17 60427981 60431761 -34840890 + L1Md_T LINE L1 1806 5586 -297 6 1046 8137 44 1 0 chr17 60431761 60432755 -34839896 + L1Md_T LINE L1 5587 6581 -1 6 1046 8980 7 0 0 chr17 60433004 60434091 -34838560 - L1Md_T LINE L1 0 6582 5496 6 1046 256 363 58 0 chr17 60434097 60434268 -34838383 + MER58B DNA MER1_type 80 260 -81 6 1046 1793 93 12 0 chr17 60434473 60434721 -34837930 - L1_Mus1 LINE L1 -392 6175 5925 6 1046 1091 52 0 0 chr17 60434721 60434856 -34837795 - L1_Mus1 LINE L1 -752 5815 5681 6 1046 2897 86 8 0 chr17 60434856 60435250 -34837401 + L1_Mus1 LINE L1 6165 6561 -6 7 1046 27 0 0 0 chr17 60435263 60435290 -34837361 + AT_rich Low_complexity Low_complexity 1 27 0 7 1046 639 369 27 37 chr17 60436837 60437211 -34835440 - RMER15-int LTR ERVL -208 4791 4422 7 1046 289 250 0 0 chr17 60437283 60437331 -34835320 - RMER15-int LTR ERVL -2776 2223 2176 7 1046 3202 78 11 20 chr17 60437563 60438021 -34834630 - L1Md_F2 LINE L1 -13 6569 6116 7 1046 393 75 0 0 chr17 60438143 60438196 -34834455 + (TCCC)n Simple_repeat Simple_repeat 4 56 0 7 1046 468 282 0 27 chr17 60438213 60438359 -34834292 - B1_Mus2 SINE Alu -4 143 2 7 1046 2323 61 41 13 chr17 60439112 60439428 -34833223 - L1_Mus2 LINE L1 0 6566 6242 7 1046 3332 123 0 25 chr17 60439428 60439953 -34832698 + L1_Mm LINE L1 4642 5153 -730 7 1046 4239 156 32 1 chr17 60440320 60441070 -34831581 - Lx2 LINE L1 0 6997 6225 7 1046 1912 29 21 0 chr17 60441496 60441734 -34830917 - L1Md_F3 LINE L1 -630 5954 5712 7 1046 821 107 0 24 chr17 60441803 60441927 -34830724 + B1_Mus1 SINE Alu 28 148 0 7 1046 180 0 0 0 chr17 60441942 60441962 -34830689 + (CCAA)n Simple_repeat Simple_repeat 4 23 0 7 1046 239 54 27 0 chr17 60441961 60441998 -34830653 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 7 1046 424 188 38 0 chr17 60443254 60443387 -34829264 + (TA)n Simple_repeat Simple_repeat 2 139 0 7 1046 27 106 0 0 chr17 60443389 60443493 -34829158 + AT_rich Low_complexity Low_complexity 1 104 0 7 1046 522 258 40 8 chr17 60443495 60443620 -34829031 - Lx7 LINE L1 -27 7669 7541 7 1046 1742 215 32 57 chr17 60443621 60443967 -34828684 + Lx4B LINE L1 6581 6926 -132 7 1046 423 0 0 0 chr17 60443967 60444014 -34828637 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1046 1742 215 32 57 chr17 60444014 60444141 -34828510 + Lx4B LINE L1 6927 7042 -16 7 1046 2295 122 68 55 chr17 60444145 60444390 -34828261 - IAPLTR2_Mm LTR ERVK 0 475 221 7 1046 216 0 0 0 chr17 60444390 60444414 -34828237 + (GA)n Simple_repeat Simple_repeat 1 24 0 7 1046 2295 122 68 55 chr17 60444414 60444637 -34828014 - IAPLTR2_Mm LTR ERVK -255 220 1 7 1046 28800 15 3 0 chr17 60444637 60447865 -34824786 - IAPEz-int LTR ERVK 0 6481 3244 7 1046 24019 13 12 0 chr17 60447857 60450567 -34822084 - IAPEz-int LTR ERVK -3730 2751 8 7 1046 2303 120 68 55 chr17 60450567 60450812 -34821839 - IAPLTR2_Mm LTR ERVK 0 475 221 7 1046 324 0 0 0 chr17 60450812 60450848 -34821803 + (GA)n Simple_repeat Simple_repeat 1 36 0 7 1046 2303 120 68 55 chr17 60450848 60451071 -34821580 - IAPLTR2_Mm LTR ERVK -255 220 1 7 1046 516 100 0 0 chr17 60451072 60451152 -34821499 + (GA)n Simple_repeat Simple_repeat 1 80 0 7 1046 3568 272 20 40 chr17 60451165 60452241 -34820410 - Lx7 LINE L1 -141 7555 6501 7 1046 2732 143 4 13 chr17 60452273 60452725 -34819926 + RLTR44B LTR ERVK 1 448 -1 7 1046 261 220 0 0 chr17 60452816 60452875 -34819776 + G-rich Low_complexity Low_complexity 1 59 0 7 1046 319 151 0 0 chr17 60452875 60452928 -34819723 + RLTR44-int LTR ERVK 885 937 -1875 7 1046 418 0 0 0 chr17 60452961 60453009 -34819642 + RLTR44-int LTR ERVK 934 981 -1831 7 1046 3366 52 0 0 chr17 60453321 60453726 -34818925 + RLTR44-int LTR ERVK 2215 2619 -193 7 1046 633 211 15 0 chr17 60453726 60453859 -34818792 - Lx7 LINE L1 -1470 6226 6092 7 1046 326 344 0 31 chr17 60453950 60454079 -34818572 - B1_Mur2 SINE Alu -11 138 14 7 1046 21 0 0 0 chr17 60455311 60455332 -34817319 + AT_rich Low_complexity Low_complexity 1 21 0 7 1046 4374 115 11 5 chr17 60455335 60455998 -34816653 - Lx3_Mus LINE L1 0 7009 6343 7 1046 326 309 9 9 chr17 60455998 60456106 -34816545 - MTD LTR MaLR -311 108 1 7 1046 600 179 0 0 chr17 60456280 60456397 -34816254 + (TA)n Simple_repeat Simple_repeat 1 117 0 7 1046 21 57 0 0 chr17 60456932 60456967 -34815684 + AT_rich Low_complexity Low_complexity 1 35 0 7 1046 214 329 24 35 chr17 60457541 60457626 -34815025 + B4 SINE B4 1 84 -208 7 1046 213 306 10 20 chr17 60457790 60457890 -34814761 + (CATATA)n Simple_repeat Simple_repeat 4 102 0 7 1046 31 76 0 0 chr17 60458067 60458133 -34814518 + AT_rich Low_complexity Low_complexity 1 66 0 7 1046 1050 107 0 0 chr17 60458135 60458275 -34814376 - B1_Mus1 SINE Alu -6 142 3 7 1046 60 27 0 0 chr17 60458661 60458735 -34813916 + AT_rich Low_complexity Low_complexity 1 74 0 7 1046 232 256 37 0 chr17 60458777 60458859 -34813792 - Lx3B LINE L1 -5 6968 6884 7 1046 189 0 0 0 chr17 60459469 60459490 -34813161 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 7 1046 188 184 20 0 chr17 60461089 60461138 -34811513 + (TTTA)n Simple_repeat Simple_repeat 1 50 0 7 1046 443 269 39 72 chr17 60461304 60461484 -34811167 + MTEa LTR MaLR 206 379 0 7 1046 641 339 189 11 chr17 60461497 60461902 -34810749 + MTEa-int LTR MaLR 20 459 -911 7 1046 2091 97 0 26 chr17 60461902 60462209 -34810442 - L1Md_F2 LINE L1 0 6582 6284 7 1046 988 343 35 54 chr17 60462209 60462626 -34810025 + MTEa-int LTR MaLR 460 1046 -534 7 1046 1362 166 9 6 chr17 60462738 60462983 -34809668 + Lx5 LINE L1 6370 6614 -386 7 1046 5924 49 1 8 chr17 60464024 60464768 -34807883 - L1Md_F3 LINE L1 -20 6564 5826 7 1046 2133 135 6 0 chr17 60464768 60465087 -34807564 + ORR1A2 LTR MaLR 7 327 0 7 1046 1722 269 11 35 chr17 60465418 60465877 -34806774 + Lx5 LINE L1 6600 7047 -3 7 1046 702 325 88 0 chr17 60465948 60466188 -34806463 + MTEa-int LTR MaLR 1293 1553 -27 7 1046 3149 267 96 14 chr17 60466910 60467783 -34804868 - Lx6 LINE L1 -6 7454 6510 7 1046 538 202 17 0 chr17 60467783 60467902 -34804749 + L1_Mur3 LINE L1 5143 5263 -617 7 1046 1920 181 61 24 chr17 60467903 60468328 -34804323 - BGLII_B LTR ERVK 0 441 1 7 1046 4481 170 73 19 chr17 60468328 60469468 -34803183 - MYSERV16_I-int LTR ERVK 0 2326 1066 7 1046 602 217 69 103 chr17 60469451 60469713 -34802938 - MYSERV16_I-int LTR ERVK -376 5404 5204 7 1046 23 78 0 0 chr17 60469743 60469794 -34802857 + AT_rich Low_complexity Low_complexity 1 51 0 7 1046 441 0 0 0 chr17 60470604 60470653 -34801998 + (TC)n Simple_repeat Simple_repeat 1 49 0 7 1046 342 0 0 0 chr17 60470653 60470690 -34801961 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1046 379 330 9 9 chr17 60471942 60472049 -34800602 + B3A SINE B2 3 109 -89 7 1046 180 0 0 0 chr17 60472066 60472086 -34800565 + (CA)n Simple_repeat Simple_repeat 2 21 0 7 1046 544 86 38 9 chr17 60472147 60472253 -34800398 + (TA)n Simple_repeat Simple_repeat 1 109 0 7 1046 2170 222 11 5 chr17 60472490 60472934 -34799717 - Lx2B LINE L1 -5 6995 6549 7 1046 2144 156 33 0 chr17 60472934 60473299 -34799352 - Lx2B LINE L1 -792 6208 5832 7 1046 492 265 41 29 chr17 60473803 60473974 -34798677 + Lx9 LINE L1 7266 7438 -206 7 1046 285 109 0 0 chr17 60474000 60474046 -34798605 + (TA)n Simple_repeat Simple_repeat 1 46 0 7 1046 201 74 0 0 chr17 60474055 60474082 -34798569 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 1046 662 236 7 14 chr17 60476017 60476163 -34796488 + B1_Mur4 SINE Alu 1 145 -5 7 1046 529 273 18 0 chr17 60476618 60476728 -34795923 + RSINE1 SINE B4 14 125 -40 7 1046 354 107 0 0 chr17 60476750 60476806 -34795845 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 1046 297 0 0 0 chr17 60477557 60477590 -34795061 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 1046 887 78 7 0 chr17 60477590 60477731 -34794920 + (GA)n Simple_repeat Simple_repeat 1 143 0 7 1046 770 261 72 38 chr17 60478140 60478459 -34794192 - Lx7 LINE L1 0 7696 7367 7 1046 4130 187 23 21 chr17 60478575 60479400 -34793251 - Lx3C LINE L1 -79 6897 6071 7 1046 6327 171 33 19 chr17 60479413 60479778 -34792873 - L1VL4 LINE L1 -2794 3092 2722 7 1046 204 40 0 0 chr17 60479778 60479803 -34792848 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 7 1046 6327 171 33 19 chr17 60479803 60480459 -34792192 - L1VL4 LINE L1 -3165 2721 2051 7 1046 432 0 0 0 chr17 60480459 60480507 -34792144 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 1046 6327 190 59 12 chr17 60480507 60481452 -34791199 - L1VL4 LINE L1 -3827 2050 941 7 1046 758 288 31 31 chr17 60481546 60481836 -34790815 - Lx7 LINE L1 -463 7233 6944 7 1046 2247 248 11 19 chr17 60481821 60482359 -34790292 - Lx7 LINE L1 -1017 6679 6146 7 1046 22 0 0 0 chr17 60482533 60482555 -34790096 + AT_rich Low_complexity Low_complexity 1 22 0 7 1046 229 338 13 0 chr17 60482572 60482649 -34790002 - ID4_ SINE ID -4 79 2 7 1046 23 0 0 0 chr17 60485074 60485097 -34787554 + AT_rich Low_complexity Low_complexity 1 23 0 7 1046 241 179 18 0 chr17 60485217 60485273 -34787378 + (TTG)n Simple_repeat Simple_repeat 2 58 0 7 1046 259 292 0 0 chr17 60485644 60485709 -34786942 + GA-rich Low_complexity Low_complexity 1 65 0 7 1046 482 317 81 57 chr17 60485946 60486157 -34786494 + B3 SINE B2 1 216 0 7 1046 396 0 0 0 chr17 60487380 60487424 -34785227 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 1046 2249 306 55 36 chr17 60489362 60489921 -34782730 - Lx7 LINE L1 -333 7363 6777 7 1046 899 103 14 0 chr17 60489921 60490066 -34782585 + (TTTC)n Simple_repeat Simple_repeat 2 148 0 7 1046 1044 136 0 0 chr17 60490067 60490243 -34782408 + (TCC)n Simple_repeat Simple_repeat 3 178 0 7 1046 2249 306 55 36 chr17 60490243 60490667 -34781984 - Lx7 LINE L1 -920 6776 6360 7 1046 21 0 0 0 chr17 60490906 60490927 -34781724 + AT_rich Low_complexity Low_complexity 1 21 0 7 1046 935 176 11 22 chr17 60490949 60491129 -34781522 + URR1B DNA MER1_type 48 225 0 7 1046 209 318 36 36 chr17 60491234 60491345 -34781306 - L2 LINE L2 -1847 1572 1462 7 1046 394 232 131 0 chr17 60491443 60491542 -34781109 + RSINE1 SINE B4 6 117 -48 7 1046 256 204 20 0 chr17 60492144 60492193 -34780458 - RLTR10A LTR ERVK 0 411 362 7 1046 422 214 29 10 chr17 60492251 60492355 -34780296 - RLTR10A LTR ERVK -166 245 140 7 1046 468 0 0 0 chr17 60493170 60493222 -34779429 + (CA)n Simple_repeat Simple_repeat 1 52 0 7 1046 1302 224 97 0 chr17 60493314 60493604 -34779047 - ORR1A3 LTR MaLR -8 318 1 7 1046 590 292 0 0 chr17 60494175 60494312 -34778339 - B3 SINE B2 -54 162 26 7 1046 306 0 0 0 chr17 60496041 60496075 -34776576 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 1046 234 0 0 0 chr17 60496075 60496100 -34776551 + (GA)n Simple_repeat Simple_repeat 1 26 0 7 1046 1165 75 11 0 chr17 60496123 60496297 -34776354 + (GA)n Simple_repeat Simple_repeat 2 177 0 7 1046 187 203 31 0 chr17 60496345 60496409 -34776242 + GA-rich Low_complexity Low_complexity 33 98 0 7 1046 324 283 14 106 chr17 60496444 60496586 -34776065 - RSINE1 SINE B4 -36 129 1 7 1046 456 254 59 15 chr17 60496605 60496741 -34775910 - B1_Mus1 SINE Alu -1 147 6 7 1046 225 300 35 52 chr17 60496650 60496766 -34775885 - MT2B LTR ERVL -345 256 143 7 1046 22 0 0 0 chr17 60497591 60497613 -34775038 + AT_rich Low_complexity Low_complexity 1 22 0 7 1046 855 225 119 0 chr17 60497838 60498065 -34774586 + MurERV4-int LTR ERVK 4440 4693 -1087 7 1046 459 224 66 30 chr17 60498098 60498264 -34774387 + MurERV4-int LTR ERVK 4753 4924 -336 7 1046 557 43 130 0 chr17 60498276 60498368 -34774283 - L1_Mus1 LINE L1 0 6567 6464 7 1046 4478 73 8 0 chr17 60498368 60498955 -34773696 + L1_Mus1 LINE L1 5843 6434 -133 7 1046 1133 248 65 3 chr17 60498955 60499279 -34773372 + MurERV4-int LTR ERVK 4917 5260 0 7 1046 1140 247 142 21 chr17 60499279 60499651 -34773000 + RMER4B LTR ERVK 1 417 -168 7 1046 341 242 73 10 chr17 60499668 60499764 -34772887 + RMER4B LTR ERVK 473 574 -11 7 1046 407 374 16 0 chr17 60499778 60499965 -34772686 + Lx8 LINE L1 7056 7245 -228 7 1046 748 111 16 0 chr17 60500439 60500565 -34772086 + (TCTA)n Simple_repeat Simple_repeat 1 128 0 1 1046 466 340 22 31 chr17 60501001 60501223 -34771428 - ID_B1 SINE B4 -1 223 4 2 1046 278 125 0 20 chr17 60501391 60501440 -34771211 - MTD LTR MaLR -2 417 370 3 1046 1868 319 59 52 chr17 60501456 60502250 -34770401 - ORR1D1-int LTR MaLR -570 800 1 4 1046 1149 253 76 13 chr17 60502250 60502566 -34770085 - ORR1D1 LTR MaLR 0 374 39 4 1046 946 281 21 78 chr17 60504268 60504550 -34768101 + ORR1D1 LTR MaLR 107 372 -2 5 1046 810 306 77 75 chr17 60505087 60506154 -34766497 + L1_Rod LINE L1 1630 2698 -3149 6 1046 213 39 0 0 chr17 60506247 60506273 -34766378 + (CAA)n Simple_repeat Simple_repeat 2 27 0 7 1046 416 278 9 0 chr17 60506342 60506450 -34766201 + Lx8 LINE L1 6830 6938 -535 8 1046 7949 32 0 0 chr17 60506460 60507404 -34765247 - L1_Mm LINE L1 -766 5117 4174 9 1046 1397 19 0 0 chr17 60507401 60507560 -34765091 + L1Md_T LINE L1 5428 5586 -297 1 1046 8052 45 7 0 chr17 60507560 60508549 -34764102 + L1Md_T LINE L1 5587 6582 0 1 1046 291 149 45 22 chr17 60508552 60508641 -34764010 + (TAAA)n Simple_repeat Simple_repeat 2 92 0 1 1046 301 281 65 24 chr17 60508647 60508771 -34763880 + Lx8 LINE L1 6980 7108 -365 8 1046 228 137 0 0 chr17 60509489 60509540 -34763111 + (T)n Simple_repeat Simple_repeat 1 51 0 1 1046 221 335 41 36 chr17 60509563 60509758 -34762893 + L2 LINE L2 1741 1936 -1483 1 1046 328 244 36 12 chr17 60509887 60509970 -34762681 - PB1D10 SINE Alu 0 117 33 1 1046 2890 29 0 11 chr17 60512276 60512631 -34760020 + L1Md_F3 LINE L1 6234 6584 0 1 1046 1214 51 0 6 chr17 60512737 60512896 -34759755 + (TTCC)n Simple_repeat Simple_repeat 3 160 0 1 1046 885 57 0 0 chr17 60512901 60513025 -34759626 - L1_Mus1 LINE L1 -1 6566 6443 1 1046 441 0 0 0 chr17 60513751 60513800 -34758851 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 1046 25 51 0 0 chr17 60515949 60515988 -34756663 + AT_rich Low_complexity Low_complexity 1 39 0 1 1046 321 281 40 86 chr17 60516018 60516046 -34756605 - Lx8 LINE L1 -84 7389 7368 2 1046 2271 124 6 0 chr17 60516046 60516393 -34756258 - Lx2 LINE L1 -7 6990 6642 2 1046 321 281 40 86 chr17 60516393 60516516 -34756135 - Lx8 LINE L1 -106 7367 7245 2 1046 261 306 0 0 chr17 60516576 60516638 -34756013 + polypyrimidine Low_complexity Low_complexity 1 62 0 2 1046 465 18 0 0 chr17 60516768 60516780 -34755871 + (TA)n Simple_repeat Simple_repeat 2 13 0 2 1046 474 18 0 0 chr17 60516780 60516835 -34755816 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1046 465 18 0 0 chr17 60516835 60516878 -34755773 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 1046 285 253 13 23 chr17 60516901 60516977 -34755674 - B4A SINE B4 -127 165 86 2 1046 388 290 60 0 chr17 60517084 60517184 -34755467 - RSINE1 SINE B4 -44 121 16 2 1046 471 302 53 14 chr17 60519088 60519296 -34753355 - B3 SINE B2 0 216 1 2 1046 537 271 54 63 chr17 60519849 60520052 -34752599 + B4A SINE B4 50 257 -35 2 1046 510 57 0 0 chr17 60520074 60520144 -34752507 + (CA)n Simple_repeat Simple_repeat 2 71 0 3 1046 1245 66 0 0 chr17 60520335 60520405 -34752246 + (GAA)n Simple_repeat Simple_repeat 3 72 0 3 1046 1177 90 11 0 chr17 60520405 60520582 -34752069 + (GGA)n Simple_repeat Simple_repeat 2 180 0 3 1046 1245 66 0 0 chr17 60520582 60520677 -34751974 + (GAA)n Simple_repeat Simple_repeat 1 95 0 3 1046 324 94 0 0 chr17 60520675 60520728 -34751923 + (CAA)n Simple_repeat Simple_repeat 2 54 0 3 1046 24 32 0 0 chr17 60521682 60521713 -34750938 + AT_rich Low_complexity Low_complexity 1 31 0 3 1046 241 179 134 49 chr17 60521866 60521948 -34750703 + MER72B LTR ERV1 150 238 -530 3 1046 777 340 48 24 chr17 60521969 60522424 -34750227 - Lx7 LINE L1 -614 7082 6617 3 1046 186 103 0 0 chr17 60522507 60522536 -34750115 + (TTCC)n Simple_repeat Simple_repeat 2 30 0 3 1046 311 275 188 15 chr17 60522536 60522669 -34749982 - HAL1-3A_ME LINE L1 -419 2439 2284 3 1046 976 109 29 0 chr17 60522681 60522856 -34749795 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 4 1046 217 250 0 0 chr17 60522868 60522912 -34749739 + CT-rich Low_complexity Low_complexity 4 47 0 4 1046 936 121 0 0 chr17 60522912 60523085 -34749566 + (TC)n Simple_repeat Simple_repeat 2 174 0 4 1046 22 0 0 0 chr17 60523495 60523517 -34749134 + AT_rich Low_complexity Low_complexity 1 22 0 4 1046 291 157 0 0 chr17 60523603 60523654 -34748997 + CT-rich Low_complexity Low_complexity 2 52 0 4 1046 1183 48 0 13 chr17 60523655 60523804 -34748847 - B1_Mus2 SINE Alu 0 147 1 4 1046 320 208 0 10 chr17 60524441 60524538 -34748113 + CT-rich Low_complexity Low_complexity 1 96 0 4 1046 963 313 121 11 chr17 60524580 60525050 -34747601 - Lx6 LINE L1 -112 7348 6507 4 1046 21 82 0 0 chr17 60525055 60525104 -34747547 + AT_rich Low_complexity Low_complexity 1 49 0 4 1046 6507 131 14 4 chr17 60525201 60526216 -34746435 - Lx3_Mus LINE L1 -8 7001 5977 4 1046 11104 58 1 0 chr17 60526276 60528021 -34744630 - L1Md_F3 LINE L1 -412 6172 4427 5 1046 5974 66 5 0 chr17 60528022 60528806 -34743845 - L1Md_F3 LINE L1 -14 6570 5783 5 1046 7200 65 2 8 chr17 60528810 60529748 -34742903 - L1Md_F2 LINE L1 -6 6576 5644 5 1046 35142 70 6 9 chr17 60529768 60535177 -34737474 - L1Md_F3 LINE L1 -86 5797 414 5 1046 229 158 35 17 chr17 60535224 60535282 -34737369 + CT-rich Low_complexity Low_complexity 6 64 0 5 1046 315 0 0 0 chr17 60535287 60535322 -34737329 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1046 389 244 15 61 chr17 60535328 60535459 -34737192 - B1_Mm SINE Alu -18 129 5 5 1046 402 21 0 0 chr17 60535651 60535698 -34736953 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1046 333 300 10 10 chr17 60535700 60535801 -34736850 - RSINE1 SINE B4 -21 144 44 5 1046 24 0 0 0 chr17 60536393 60536417 -34736234 + AT_rich Low_complexity Low_complexity 1 24 0 5 1046 223 250 14 14 chr17 60536429 60536498 -34736153 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 1046 1748 114 7 17 chr17 60536578 60536872 -34735779 - Lx3B LINE L1 -721 6252 5962 6 1046 356 0 23 0 chr17 60536877 60536921 -34735730 + (TAA)n Simple_repeat Simple_repeat 1 45 0 6 1046 22 0 0 0 chr17 60537255 60537277 -34735374 + AT_rich Low_complexity Low_complexity 1 22 0 6 1046 234 0 0 0 chr17 60537577 60537603 -34735048 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 1046 1098 107 17 6 chr17 60537665 60537843 -34734808 - L1_Mus3 LINE L1 -5 6633 6454 6 1046 8700 99 46 19 chr17 60537910 60539435 -34733216 + Lx3_Mus LINE L1 5463 7009 0 6 1046 637 305 112 30 chr17 60539535 60539802 -34732849 + MTD LTR MaLR 46 334 -85 6 1046 387 0 0 0 chr17 60542161 60542204 -34730447 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1046 439 333 36 36 chr17 60542288 60542456 -34730195 + B4A SINE B4 105 272 -20 6 1046 498 114 0 0 chr17 60542535 60542614 -34730037 + (CATA)n Simple_repeat Simple_repeat 4 82 0 6 1046 852 92 0 0 chr17 60542633 60542774 -34729877 + (GA)n Simple_repeat Simple_repeat 2 142 0 7 1046 483 33 0 0 chr17 60542774 60542834 -34729817 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 1046 232 319 72 0 chr17 60544442 60544511 -34728140 + PB1 SINE Alu 3 76 -51 7 1046 248 284 73 120 chr17 60544801 60544993 -34727658 - MLT1A LTR MaLR -19 355 173 7 1046 3455 203 38 30 chr17 60545124 60545911 -34726740 - Lx4B LINE L1 0 7058 6266 7 1046 4400 126 53 81 chr17 60545907 60546171 -34726480 - Lx2 LINE L1 -1098 5899 5644 7 1046 2679 109 0 5 chr17 60546171 60546578 -34726073 - L1_Mus4 LINE L1 -2 6634 6230 7 1046 4400 189 6 44 chr17 60546578 60547324 -34725327 - Lx2 LINE L1 -240 5643 4910 7 1046 21 0 0 0 chr17 60547438 60547459 -34725192 + AT_rich Low_complexity Low_complexity 1 21 0 7 1046 1016 345 96 80 chr17 60547502 60548448 -34724203 - Lx8 LINE L1 -306 7167 6207 7 1046 935 305 74 10 chr17 60548585 60548896 -34723755 + ORR1D2 LTR MaLR 40 370 0 7 1046 1622 123 6 115 chr17 60548896 60548976 -34723675 - L1_Mur1 LINE L1 -2095 3791 3723 8 1046 1043 76 14 7 chr17 60548976 60549122 -34723529 + B1_Mm SINE Alu 1 147 0 8 1046 1622 123 6 115 chr17 60549122 60549380 -34723271 - L1_Mur1 LINE L1 -2164 3722 3490 8 1046 2015 82 3 3 chr17 60549375 60549658 -34722993 + L1_Mur1 LINE L1 4500 4782 -1104 8 1046 459 297 17 8 chr17 60549700 60549819 -34722832 - B3 SINE B2 -96 120 1 8 1046 288 0 0 0 chr17 60549880 60549912 -34722739 + (TTG)n Simple_repeat Simple_repeat 2 33 0 8 1046 487 265 26 0 chr17 60549913 60550030 -34722621 - B1_Mur2 SINE Alu -1 148 29 8 1046 24 0 0 0 chr17 60550372 60550396 -34722255 + AT_rich Low_complexity Low_complexity 1 24 0 8 1046 3538 90 6 12 chr17 60550402 60550907 -34721744 - L1_Mus1 LINE L1 -373 5510 5009 8 1046 7113 80 17 12 chr17 60550898 60551960 -34720691 + L1_Mus1 LINE L1 5498 6566 -1 8 1046 4107 103 17 3 chr17 60553132 60553734 -34718917 - L1_Mus3 LINE L1 0 6638 6029 8 130 4394 164 24 4 chr17 60554581 60555429 -34717222 + L1_Mur2 LINE L1 521 1386 -4491 8 1047 2753 43 23 6 chr17 60555429 60555779 -34716872 + L1Md_F3 LINE L1 6215 6570 -14 9 1047 3289 134 14 10 chr17 60555779 60556177 -34716474 + L1_Mur2 LINE L1 1387 1784 -4093 8 1047 4096 48 2 0 chr17 60556180 60556681 -34715970 - L1Md_F2 LINE L1 -12 6570 6069 9 1047 2980 25 3 0 chr17 60556681 60557039 -34715612 + LTRIS_Mm LTR ERV1 1 359 -123 9 1047 2299 69 119 11 chr17 60557039 60557391 -34715260 - RLTR10 LTR ERVK 0 390 1 9 1047 8564 26 1 5 chr17 60557393 60558392 -34714259 - RLTR10-int LTR ERVK -3 1984 990 9 1047 5382 39 9 3 chr17 60558666 60559315 -34713336 - RLTR10-int LTR ERVK -989 998 346 9 1047 1043 187 7 17 chr17 60559315 60559359 -34713292 + LTRIS_Mm LTR ERV1 270 352 -130 9 1047 2299 69 119 11 chr17 60559359 60559711 -34712940 - RLTR10 LTR ERVK 0 390 1 9 1047 1043 94 0 0 chr17 60559711 60559840 -34712811 + LTRIS_Mm LTR ERV1 353 481 -1 9 1047 1849 74 0 0 chr17 60559840 60560084 -34712567 - L1Md_F2 LINE L1 -510 6072 5829 9 1047 3483 74 0 5 chr17 60560084 60560532 -34712119 + L1_Mm LINE L1 5198 5643 -240 9 1047 6518 143 44 22 chr17 60560535 60560645 -34712006 + L1_Mur2 LINE L1 1925 2034 -3843 8 1047 360 0 0 0 chr17 60560645 60560685 -34711966 + (CA)n Simple_repeat Simple_repeat 1 40 0 9 1047 6518 143 44 22 chr17 60560685 60561822 -34710829 + L1_Mur2 LINE L1 2035 3200 -2677 8 1047 913 241 218 25 chr17 60561821 60562179 -34710472 + Lx6 LINE L1 7030 7456 -4 9 1047 1683 173 9 63 chr17 60563099 60563433 -34709218 + ORR1A3 LTR MaLR 10 325 -1 1 1047 859 296 54 11 chr17 60563630 60563890 -34708761 - MTD LTR MaLR -148 271 1 1 1047 351 0 0 0 chr17 60563965 60564004 -34708647 + (CAAAA)n Simple_repeat Simple_repeat 5 43 0 1 1047 261 0 0 0 chr17 60564400 60564429 -34708222 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 1 1047 253 217 159 0 chr17 60567257 60567326 -34705325 - L1M2 LINE L1 -1887 4256 4177 1 1047 9370 101 19 15 chr17 60567314 60568364 -34704287 - Lx3_Mus LINE L1 -44 6965 5910 1 1047 212 0 36 0 chr17 60568364 60568392 -34704259 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 1047 28662 102 28 25 chr17 60568392 60570150 -34702501 - Lx3_Mus LINE L1 -1100 5909 4137 1 1047 459 0 0 0 chr17 60570150 60570201 -34702450 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 1047 28662 120 54 34 chr17 60570201 60574007 -34698644 - Lx3_Mus LINE L1 -1750 4136 7 1 1047 571 263 68 11 chr17 60574217 60574394 -34698257 - B3A SINE B2 -11 187 1 1 1047 28 79 0 0 chr17 60575791 60575854 -34696797 + AT_rich Low_complexity Low_complexity 1 63 0 1 1047 213 226 0 0 chr17 60576746 60576799 -34695852 + T-rich Low_complexity Low_complexity 1 53 0 1 1047 41100 6 0 0 chr17 60576867 60583449 -34689202 - L1Md_A LINE L1 0 6582 1 1 1047 383 267 36 53 chr17 60583458 60583681 -34688970 - Lx5 LINE L1 -3 7047 6784 1 1047 1409 221 146 8 chr17 60583680 60584036 -34688615 + Lx5 LINE L1 6382 6786 -264 1 1047 207 234 31 0 chr17 60584418 60584460 -34688191 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 1047 207 0 0 0 chr17 60584460 60584483 -34688168 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 1 1047 207 234 31 0 chr17 60584483 60584504 -34688147 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 1047 498 80 22 22 chr17 60584514 60584604 -34688047 + (TAGA)n Simple_repeat Simple_repeat 1 90 0 1 1047 1565 335 69 37 chr17 60584718 60585699 -34686952 + Lx8 LINE L1 6341 7353 -120 1 1047 444 214 16 73 chr17 60585799 60585991 -34686660 + RMER17C LTR ERVK 95 275 -135 1 1047 494 286 8 16 chr17 60586933 60587061 -34685590 + B3A SINE B2 5 131 -67 1 1047 993 236 23 15 chr17 60587061 60587324 -34685327 + Lx9 LINE L1 6797 7061 -583 1 1047 786 283 81 25 chr17 60587325 60587757 -34684894 - Lx9 LINE L1 -1684 5960 5476 1 1047 24 32 0 0 chr17 60589075 60589106 -34683545 + AT_rich Low_complexity Low_complexity 1 31 0 1 1047 815 337 68 20 chr17 60589974 60590368 -34682283 - MTD LTR MaLR -5 414 2 1 1047 1377 271 48 30 chr17 60590494 60590623 -34682028 + Lx9 LINE L1 6943 7075 -569 1 1047 327 104 0 0 chr17 60590623 60590671 -34681980 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1047 1377 271 48 30 chr17 60590671 60591103 -34681548 + Lx9 LINE L1 7076 7514 -130 1 1047 188 189 38 0 chr17 60591111 60591164 -34681487 + (TATG)n Simple_repeat Simple_repeat 1 55 0 1 1047 338 152 61 0 chr17 60591164 60591230 -34681421 - HAL1-3A_ME LINE L1 -840 2018 1949 1 1047 981 252 13 38 chr17 60592107 60592346 -34680305 + Lx6 LINE L1 6295 6527 -933 1 1047 1413 263 44 0 chr17 60592346 60592665 -34679986 - ORR1C2 LTR MaLR -2 382 50 1 1047 3371 109 58 6 chr17 60592665 60593182 -34679469 + MT2B2 LTR ERVL 1 544 -40 1 1047 396 0 0 0 chr17 60593182 60593226 -34679425 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 1047 189 0 0 0 chr17 60593225 60593246 -34679405 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1047 259 317 48 0 chr17 60593246 60593350 -34679301 - RMER12 LTR ERVK -471 851 743 1 1047 244 270 0 16 chr17 60593342 60593406 -34679245 - ORR1C2 LTR MaLR -321 63 1 1 1047 2328 284 24 111 chr17 60593406 60594083 -34678568 + Lx7 LINE L1 6536 7187 -509 1 1047 459 0 0 0 chr17 60594083 60594134 -34678517 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1047 1040 95 7 0 chr17 60594134 60594271 -34678380 - B1_Mus1 SINE Alu -9 139 2 1 1047 2328 284 24 111 chr17 60594271 60594371 -34678280 + Lx7 LINE L1 7188 7283 -413 1 1047 1393 53 20 55 chr17 60594371 60594571 -34678080 + B2_Mm1t SINE B2 1 193 0 1 1047 2328 284 24 111 chr17 60594571 60594708 -34677943 + Lx7 LINE L1 7284 7363 -333 1 1047 297 68 0 0 chr17 60594708 60594752 -34677899 + (TCTCTG)n Simple_repeat Simple_repeat 3 46 0 1 1047 2328 284 24 111 chr17 60594752 60594938 -34677713 + Lx7 LINE L1 7364 7542 -154 1 1047 468 223 157 10 chr17 60595118 60595322 -34677329 - Lx9 LINE L1 -2 7642 7409 1 1047 993 281 39 21 chr17 60595341 60595675 -34676976 - Lx9 LINE L1 -297 7347 7008 1 1047 1089 147 24 10 chr17 60595681 60595887 -34676764 + L1_Mur2 LINE L1 2847 3055 -2822 1 1047 931 221 30 8 chr17 60595879 60596116 -34676535 - Lx9 LINE L1 -645 6999 6758 1 1047 4326 243 81 50 chr17 60596102 60597492 -34675159 + Lx7 LINE L1 6264 7696 0 1 1047 1854 102 98 63 chr17 60598183 60598498 -34674153 - ORR1A3 LTR MaLR 0 326 1 1 1047 23 33 0 0 chr17 60598936 60598966 -34673685 + AT_rich Low_complexity Low_complexity 1 30 0 1 1047 963 156 30 40 chr17 60598968 60599168 -34673483 - Lx3A LINE L1 -5 6976 6779 1 1047 3625 271 60 8 chr17 60599204 60600217 -34672434 + Lx6 LINE L1 6378 7443 -17 1 1047 421 111 12 0 chr17 60600609 60600690 -34671961 - L1_Mus3 LINE L1 -1 6637 6556 1 1047 422 113 0 0 chr17 60600705 60600776 -34671875 - L1_Mus3 LINE L1 -12 6626 6556 1 1047 1642 26 5 0 chr17 60601231 60601423 -34671228 - B2_Mm1t SINE B2 0 193 1 1 1047 29 0 0 0 chr17 60603263 60603292 -34669359 + AT_rich Low_complexity Low_complexity 1 29 0 1 1047 423 339 25 0 chr17 60603552 60603673 -34668978 + B1_Mur1 SINE Alu 1 124 -25 1 1047 394 336 7 68 chr17 60603707 60603854 -34668797 + RSINE1 SINE B4 11 148 -17 1 1047 207 0 0 0 chr17 60603878 60603901 -34668750 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1047 273 29 0 0 chr17 60603901 60603934 -34668717 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 1047 228 371 34 0 chr17 60606421 60606510 -34666141 + MLT1E2 LTR MaLR 353 444 -183 1 1047 27 87 0 0 chr17 60607478 60607547 -34665104 + AT_rich Low_complexity Low_complexity 1 69 0 1 1047 3359 37 76 22 chr17 60607960 60608406 -34664245 - L1Md_F3 LINE L1 -3 6581 6112 1 1047 2113 181 197 14 chr17 60608583 60609166 -34663485 - RMER6C LTR ERVK 0 690 1 1 1047 549 219 16 8 chr17 60610256 60610380 -34662271 - ORR1A1 LTR MaLR -221 125 1 1 1047 1376 213 4 8 chr17 60610406 60610671 -34661980 + MTC LTR MaLR 105 368 -53 1 1047 253 211 33 50 chr17 60610721 60610781 -34661870 - L1MDa LINE L1 -5829 804 746 1 1047 378 0 0 0 chr17 60611668 60611710 -34660941 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 1 1047 1629 252 76 5 chr17 60611899 60612282 -34660369 + MTC LTR MaLR 4 413 -8 1 1047 1350 172 4 0 chr17 60612287 60612514 -34660137 + RMER6D LTR ERVK 1 228 -492 1 1047 1068 176 16 0 chr17 60612641 60612829 -34659822 + RMER6D LTR ERVK 500 690 0 1 1047 185 108 27 0 chr17 60612843 60612880 -34659771 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1 1047 22 88 0 0 chr17 60613072 60613129 -34659522 + AT_rich Low_complexity Low_complexity 1 57 0 1 1047 327 176 0 0 chr17 60613620 60613711 -34658940 + GA-rich Low_complexity Low_complexity 2 92 0 1 1047 202 146 0 24 chr17 60614304 60614346 -34658305 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1047 423 0 0 0 chr17 60614370 60614417 -34658234 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 1 1047 1105 238 79 37 chr17 60615571 60615921 -34656730 + RMER19B LTR ERVK 1 391 -346 1 1047 476 188 0 12 chr17 60615972 60616058 -34656593 + RMER19B LTR ERVK 805 889 -13 1 1047 5599 77 0 0 chr17 60616058 60616847 -34655804 + L1_Mm LINE L1 1449 2237 -3646 1 1047 550 46 0 0 chr17 60616982 60617047 -34655604 + L1_Mm LINE L1 5522 5586 -297 1 1047 8777 4 10 0 chr17 60617047 60618033 -34654618 + L1Md_T LINE L1 5587 6582 0 1 1047 338 368 68 51 chr17 60618087 60618176 -34654475 + MLT2D LTR ERVL 25 113 -301 1 1047 304 91 0 18 chr17 60618176 60618232 -34654419 - L1Md_F3 LINE L1 -10 6574 6520 1 1047 338 368 68 51 chr17 60618232 60618437 -34654214 + MLT2D LTR ERVL 114 324 -90 1 1047 213 39 0 0 chr17 60618496 60618522 -34654129 + (TCTCTG)n Simple_repeat Simple_repeat 2 27 0 1 1047 237 297 144 0 chr17 60618763 60618881 -34653770 + MLT1-int LTR MaLR 2 136 -1235 1 1047 247 237 94 31 chr17 60618889 60618974 -34653677 + MLT1-int LTR MaLR 381 471 -900 1 1047 621 275 18 18 chr17 60618974 60619137 -34653514 + ORR1D1 LTR MaLR 1 163 -211 1 1047 236 149 106 0 chr17 60619133 60619180 -34653471 + ORR1D1 LTR MaLR 291 342 -52 1 1047 983 99 7 7 chr17 60619216 60619368 -34653283 - L1_Mus2 LINE L1 -2 6564 6413 1 1047 529 254 23 8 chr17 60619410 60619541 -34653110 + ORR1D1-int LTR MaLR 1 133 -1237 1 1047 1109 271 58 19 chr17 60619777 60620156 -34652495 + MTD LTR MaLR 1 394 -25 1 1047 3154 281 60 83 chr17 60620179 60621467 -34651184 + MTD-int LTR MaLR 1 1258 0 1 1047 1249 238 116 36 chr17 60621467 60621855 -34650796 + MTD LTR MaLR 1 419 0 1 1047 242 29 29 0 chr17 60622500 60622535 -34650116 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1 1047 226 214 70 20 chr17 60622627 60622727 -34649924 + (CATATA)n Simple_repeat Simple_repeat 1 105 0 1 1047 333 256 0 0 chr17 60624673 60624755 -34647896 + L1MA6 LINE L1 6174 6255 -45 1 1047 321 68 0 0 chr17 60625005 60625049 -34647602 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1047 386 234 8 0 chr17 60625306 60625434 -34647217 + (TA)n Simple_repeat Simple_repeat 1 129 0 1 1047 679 287 0 0 chr17 60625434 60625591 -34647060 + U1 snRNA snRNA 7 163 -2 1 1047 25 31 0 0 chr17 60625591 60625623 -34647028 + AT_rich Low_complexity Low_complexity 1 32 0 1 1047 376 278 16 26 chr17 60625724 60625902 -34646749 + Lx7 LINE L1 4138 4325 -1818 1 1047 353 329 0 0 chr17 60625914 60625996 -34646655 + B3A SINE B2 9 90 -108 1 1047 717 289 102 11 chr17 60626077 60626441 -34646210 + Lx7 LINE L1 4283 4679 -1201 1 1047 528 327 34 5 chr17 60626737 60626946 -34645705 + Lx7 LINE L1 4672 4886 -994 1 1047 318 302 51 51 chr17 60626985 60627219 -34645432 + Lx7 LINE L1 5053 5286 -594 1 1047 4535 78 0 3 chr17 60628157 60628766 -34643885 + L1Md_F2 LINE L1 4980 5586 -297 1 1047 7938 51 0 4 chr17 60628766 60629753 -34642898 + L1Md_F2 LINE L1 5587 6569 -13 1 1047 36 0 0 0 chr17 60629753 60629789 -34642862 + AT_rich Low_complexity Low_complexity 1 36 0 1 1047 823 326 54 24 chr17 60630730 60631375 -34641276 + Lx7 LINE L1 5420 6085 -1611 1 1047 447 342 98 43 chr17 60631474 60631893 -34640758 - L1M2 LINE L1 -3387 2756 2315 1 1047 3836 181 38 3 chr17 60632415 60632913 -34639738 - L1MA4A LINE L1 -317 5986 5443 1 1047 297 0 0 0 chr17 60632913 60632946 -34639705 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 1047 1188 143 0 28 chr17 60632949 60633165 -34639486 - L1_Mus4 LINE L1 -12 6624 6415 1 1047 3836 159 37 0 chr17 60633165 60633421 -34639230 - L1MA4A LINE L1 -441 5442 5185 1 1047 438 20 0 0 chr17 60633655 60633706 -34638945 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1047 13425 158 24 20 chr17 60634566 60637698 -34634953 + L1VL4 LINE L1 2 3147 -412 1 1047 11137 171 10 1 chr17 60637697 60638526 -34634125 + L1_Mus3 LINE L1 3891 4722 -1161 1 1047 387 0 0 0 chr17 60638526 60638569 -34634082 + (TAA)n Simple_repeat Simple_repeat 3 45 0 1 1047 11137 152 30 29 chr17 60638569 60640475 -34632176 + L1_Mus3 LINE L1 4723 6638 0 1 1047 25 51 0 0 chr17 60640558 60640597 -34632054 + AT_rich Low_complexity Low_complexity 1 39 0 1 1047 23 0 0 0 chr17 60641120 60641143 -34631508 + AT_rich Low_complexity Low_complexity 1 23 0 1 1047 872 278 61 61 chr17 60642390 60642769 -34629882 - ORR1C2 LTR MaLR 0 384 6 2 1047 781 307 96 65 chr17 60643798 60644457 -34628194 + RMER15-int LTR ERVL 947 1625 -3374 2 1047 2800 118 34 0 chr17 60644833 60645272 -34627379 + L1_Mm LINE L1 3153 3606 -2277 2 1047 743 77 19 0 chr17 60645399 60645503 -34627148 + PB1D9 SINE Alu 2 107 -13 2 1047 480 48 0 0 chr17 60645506 60645569 -34627082 + (CAAAA)n Simple_repeat Simple_repeat 2 64 0 2 1047 864 193 116 24 chr17 60646265 60646472 -34626179 - URR1A DNA MER1_type 0 226 1 2 1047 202 146 24 0 chr17 60646518 60646559 -34626092 + (TTATA)n Simple_repeat Simple_repeat 2 43 0 2 1047 25 0 0 0 chr17 60646721 60646746 -34625905 + AT_rich Low_complexity Low_complexity 1 25 0 2 1047 23 0 0 0 chr17 60646850 60646873 -34625778 + AT_rich Low_complexity Low_complexity 1 23 0 2 1047 21 0 0 0 chr17 60647016 60647037 -34625614 + AT_rich Low_complexity Low_complexity 1 21 0 2 1047 263 328 20 109 chr17 60647391 60647538 -34625113 + B3A SINE B2 60 193 -5 2 1047 2171 56 25 0 chr17 60647787 60648073 -34624578 - L1Md_F3 LINE L1 -14 6570 6278 2 1047 992 130 0 0 chr17 60648855 60649001 -34623650 - B1_Mm SINE Alu -1 146 1 2 1047 458 259 54 0 chr17 60649399 60649511 -34623140 - B1_Mur1 SINE Alu -7 142 25 2 1047 3806 206 14 52 chr17 60649557 60650454 -34622197 - Lx4B LINE L1 -4 7054 6192 2 1047 25 0 0 0 chr17 60650944 60650969 -34621682 + AT_rich Low_complexity Low_complexity 1 25 0 2 1047 21 36 0 0 chr17 60651084 60651112 -34621539 + AT_rich Low_complexity Low_complexity 1 28 0 2 1047 7941 50 1 3 chr17 60651602 60653056 -34619595 - L1Md_F2 LINE L1 -3 6579 5129 2 1047 25 0 0 0 chr17 60653202 60653227 -34619424 + AT_rich Low_complexity Low_complexity 1 25 0 2 1047 4329 107 0 12 chr17 60653321 60653996 -34618655 - MusHAL1 LINE L1 -1234 1478 812 2 1047 266 28 0 0 chr17 60653994 60654030 -34618621 - MusHAL1 LINE L1 -2334 378 343 2 1047 288 203 39 3 chr17 60654028 60654105 -34618546 + Lx6 LINE L1 7375 7444 -16 2 1047 273 57 0 0 chr17 60654105 60654140 -34618511 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2 1047 345 278 60 77 chr17 60654170 60654204 -34618447 - Tigger5 DNA MER2_type 0 2406 2381 2 1047 2284 162 68 173 chr17 60654204 60654973 -34617678 + RMER6C LTR ERVK 3 690 0 2 1047 345 278 60 77 chr17 60654973 60655055 -34617596 - Tigger5 DNA MER2_type -26 2380 2292 2 1047 385 255 68 83 chr17 60655070 60655275 -34617376 - Lx6 LINE L1 -30 7430 7253 2 1047 247 271 11 56 chr17 60655275 60655365 -34617286 - Tigger5 DNA MER2_type -147 2259 2174 2 1047 272 371 0 10 chr17 60655398 60655496 -34617155 - Tigger5 DNA MER2_type -2174 232 136 2 1047 3451 65 24 9 chr17 60656033 60656495 -34616156 - L1Md_F2 LINE L1 -13 6569 6101 2 1047 27 29 0 0 chr17 60656524 60656558 -34616093 + AT_rich Low_complexity Low_complexity 1 34 0 2 1047 337 258 22 0 chr17 60656600 60656689 -34615962 - B3A SINE B2 -104 94 4 2 1047 22 94 0 0 chr17 60657519 60657583 -34615068 + AT_rich Low_complexity Low_complexity 1 64 0 2 1047 1639 76 0 0 chr17 60657651 60657862 -34614789 + L1_Mus1 LINE L1 6154 6364 -203 2 1047 7908 107 3 0 chr17 60657908 60659067 -34613584 - L1_Mm LINE L1 -1258 4625 3464 2 1047 315 0 0 0 chr17 60659071 60659106 -34613545 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1047 5329 163 25 20 chr17 60659269 60660312 -34612339 - Lx2 LINE L1 -1 6996 5949 2 1047 1348 168 3 57 chr17 60660315 60660357 -34612294 - Lx2 LINE L1 -598 5969 5936 2 1047 519 132 0 0 chr17 60660357 60660448 -34612203 - L1_Mus3 LINE L1 -8 6630 6540 2 1047 1727 90 0 28 chr17 60660448 60660702 -34611949 - Lx2 LINE L1 -632 5935 5689 2 1047 1836 137 7 0 chr17 60660700 60660984 -34611667 + Lx2 LINE L1 5408 5693 -190 2 1047 326 303 18 0 chr17 60661081 60661190 -34611461 - RSINE1 SINE B4 -31 134 24 2 1047 217 344 44 74 chr17 60661793 60661928 -34610723 - B2_Mm2 SINE B2 -20 175 45 2 1047 654 322 77 51 chr17 60662210 60662599 -34610052 - MTD LTR MaLR -20 399 1 2 1047 484 102 0 33 chr17 60663211 60663302 -34609349 + (TCCC)n Simple_repeat Simple_repeat 3 90 0 2 1047 234 304 0 0 chr17 60663326 60663382 -34609269 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 1047 222 37 0 0 chr17 60664010 60664037 -34608614 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1047 225 323 10 10 chr17 60664205 60664305 -34608346 + (TG)n Simple_repeat Simple_repeat 1 100 0 2 1047 548 296 90 10 chr17 60664428 60664629 -34608022 + MTD LTR MaLR 87 303 -116 2 1047 364 327 70 18 chr17 60664601 60664772 -34607879 + MTD-int LTR MaLR 861 1040 -218 2 1047 983 226 13 4 chr17 60664885 60665120 -34607531 - Lx4B LINE L1 -20 7038 6802 2 1047 250 241 169 0 chr17 60665127 60665210 -34607441 + MTD-int LTR MaLR 1152 1248 -10 2 1047 554 329 112 56 chr17 60665222 60665615 -34607036 + MTD LTR MaLR 3 417 -2 2 1047 32 43 0 0 chr17 60665618 60665664 -34606987 + AT_rich Low_complexity Low_complexity 1 46 0 2 1047 496 260 24 16 chr17 60666076 60666201 -34606450 - B3 SINE B2 0 216 91 2 1047 23 54 0 0 chr17 60666490 60666527 -34606124 + AT_rich Low_complexity Low_complexity 1 37 0 2 1047 5938 134 5 13 chr17 60669098 60670056 -34602595 + Lx3A LINE L1 6011 6966 -15 2 1047 180 0 0 0 chr17 60670056 60670076 -34602575 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 2 1047 5938 134 5 13 chr17 60670076 60670095 -34602556 + Lx3A LINE L1 6967 6980 -1 2 1047 1310 236 32 0 chr17 60670166 60670476 -34602175 + RMER6D LTR ERVK 1 320 -400 2 1047 687 199 6 22 chr17 60670476 60670656 -34601995 + (CATA)n Simple_repeat Simple_repeat 2 178 0 2 1047 29 60 0 0 chr17 60671519 60671569 -34601082 + AT_rich Low_complexity Low_complexity 1 50 0 2 1047 22 35 0 0 chr17 60671699 60671728 -34600923 + AT_rich Low_complexity Low_complexity 1 29 0 2 1047 26 30 0 0 chr17 60672171 60672204 -34600447 + AT_rich Low_complexity Low_complexity 1 33 0 2 1047 239 439 0 0 chr17 60672560 60672683 -34599968 + B3A SINE B2 39 161 -37 2 1047 282 106 0 0 chr17 60672695 60672742 -34599909 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1047 31 92 0 0 chr17 60672742 60672829 -34599822 + AT_rich Low_complexity Low_complexity 1 87 0 2 1047 253 307 99 7 chr17 60673519 60673660 -34598991 - MER45B DNA Tip100 -533 507 354 2 1047 1027 314 158 82 chr17 60674203 60675147 -34597504 - Lx8 LINE L1 -270 7203 6188 2 1047 332 332 124 53 chr17 60675589 60675945 -34596706 + MER45B DNA Tip100 251 631 -409 2 1047 270 140 34 42 chr17 60675945 60676064 -34596587 + (TA)n Simple_repeat Simple_repeat 2 119 0 2 1047 1976 222 72 10 chr17 60676100 60676586 -34596065 - RLTR11A2 LTR ERVK -11 516 1 2 1047 228 331 129 37 chr17 60676723 60677018 -34595633 + MER45B DNA Tip100 719 1040 0 2 1047 957 138 11 6 chr17 60677562 60677737 -34594914 + L1_Mus3 LINE L1 6459 6634 -4 2 1047 4726 180 72 26 chr17 60677800 60679295 -34593356 + Lx2 LINE L1 5408 6997 0 2 1047 608 321 18 0 chr17 60679306 60679474 -34593177 + ID_B1 SINE B4 1 171 -53 2 1047 491 297 77 10 chr17 60679785 60679979 -34592672 + Lx8 LINE L1 6294 6500 -973 2 1047 678 311 80 67 chr17 60679983 60680506 -34592145 + Lx8 LINE L1 6645 7174 -299 2 1047 294 303 0 15 chr17 60681255 60681373 -34591278 - B1F1 SINE Alu -6 143 1 2 1047 2253 99 15 6 chr17 60682184 60682520 -34590131 + Lx3_Mus LINE L1 5693 6031 -978 2 1047 584 152 18 9 chr17 60682514 60682627 -34590024 - Lx3A LINE L1 -35 6946 6833 2 1047 36 0 0 0 chr17 60682627 60682663 -34589988 + AT_rich Low_complexity Low_complexity 1 36 0 2 1047 956 92 0 0 chr17 60682909 60683039 -34589612 + B1_Mm SINE Alu 15 144 -3 2 1047 216 0 0 0 chr17 60683039 60683063 -34589588 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 1047 438 266 124 15 chr17 60683432 60683634 -34589017 - Lx9 LINE L1 -297 7347 7124 2 1047 370 289 31 0 chr17 60683659 60683787 -34588864 + Lx9 LINE L1 7360 7491 -153 2 1047 622 34 22 11 chr17 60683871 60683960 -34588691 + (TAAAA)n Simple_repeat Simple_repeat 4 93 0 2 1047 2199 171 120 14 chr17 60684105 60684598 -34588053 - Lx2B LINE L1 0 7000 6456 2 1047 29 90 0 0 chr17 60684895 60684973 -34587678 + AT_rich Low_complexity Low_complexity 1 78 0 2 1047 1091 95 0 13 chr17 60685682 60685832 -34586819 + B1_Mus1 SINE Alu 1 148 0 2 1047 387 200 11 0 chr17 60686066 60686156 -34586495 - Lx4A LINE L1 -6 7052 6962 2 1048 2138 135 81 68 chr17 60686614 60687083 -34585568 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1048 320 55 0 85 chr17 60687109 60687168 -34585483 + IAPEz-int LTR ERVK 3 56 -1931 2 1048 458 118 130 13 chr17 60687169 60687275 -34585376 + IAPEz-int LTR ERVK 13 123 -6358 2 1048 227 267 0 0 chr17 60687275 60687320 -34585331 + RLTR27 LTR ERVK 231 275 -34 2 1048 4242 70 8 27 chr17 60687320 60687985 -34584666 + IAPEz-int LTR ERVK 67 662 -5819 2 1048 2162 79 0 0 chr17 60687985 60688263 -34584388 + IAPEz-int LTR ERVK 1359 1636 -4845 2 1048 6034 39 4 19 chr17 60688262 60689017 -34583634 + IAPEz-int LTR ERVK 5736 6479 -2 2 1048 2163 139 79 68 chr17 60689019 60689489 -34583162 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1048 232 252 79 119 chr17 60689984 60690110 -34582541 + B1F SINE Alu 29 149 0 2 1048 258 288 138 0 chr17 60690124 60690204 -34582447 + Lx3C LINE L1 6821 6911 -65 2 1048 683 176 0 27 chr17 60690204 60690350 -34582301 + Lx2 LINE L1 6855 6996 -1 2 1048 7336 117 36 9 chr17 60690474 60691547 -34581104 - Lx3_Mus LINE L1 0 7009 5932 2 1048 315 0 0 0 chr17 60691547 60691582 -34581069 + (TA)n Simple_repeat Simple_repeat 2 36 0 2 1048 7336 117 36 9 chr17 60691582 60691660 -34580991 - Lx3_Mus LINE L1 -1078 5931 5829 2 1048 2062 99 0 40 chr17 60691662 60691988 -34580663 - L1Md_F2 LINE L1 0 6582 6270 2 1048 24341 139 55 23 chr17 60691988 60697050 -34575601 - Lx3_Mus LINE L1 -647 5239 14 2 1048 1322 216 96 19 chr17 60697169 60697532 -34575119 - Lx4B LINE L1 -1 7057 6667 2 1048 2012 210 85 34 chr17 60697726 60698220 -34574431 + RLTR11A LTR ERVK 10 528 0 2 1048 612 40 0 0 chr17 60698461 60698536 -34574115 + (TC)n Simple_repeat Simple_repeat 2 76 0 2 1048 279 0 0 0 chr17 60699338 60699369 -34573282 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 2 1048 38078 42 0 3 chr17 60699507 60705801 -34566850 - L1Md_T LINE L1 0 6585 211 2 1048 1295 258 140 3 chr17 60706105 60706440 -34566211 + Lx5 LINE L1 6666 7046 -4 2 1048 655 343 35 46 chr17 60706590 60706874 -34565777 + MLT1E2 LTR MaLR 325 605 -22 2 1048 648 319 21 0 chr17 60707848 60708036 -34564615 - B3 SINE B2 -9 207 16 2 1048 411 307 62 18 chr17 60708063 60708352 -34564299 - L1MA6 LINE L1 -290 6001 5692 2 1048 3097 78 28 5 chr17 60708635 60709060 -34563591 - L1_Mus1 LINE L1 -1 6566 6132 2 1048 3323 57 0 0 chr17 60709060 60709479 -34563172 + L1_Mus1 LINE L1 5621 6039 -528 2 1048 27 49 0 0 chr17 60709583 60709624 -34563027 + AT_rich Low_complexity Low_complexity 1 41 0 2 1048 706 317 50 33 chr17 60709750 60710053 -34562598 - Lx7 LINE L1 -625 7071 6764 2 1048 23 33 0 0 chr17 60710109 60710139 -34562512 + AT_rich Low_complexity Low_complexity 1 30 0 3 1048 476 326 21 7 chr17 60710602 60710744 -34561907 - MTEa LTR MaLR -90 289 146 3 1048 1479 66 5 5 chr17 60711274 60711473 -34561178 - L1_Mus2 LINE L1 -204 6362 6164 3 1048 943 112 94 0 chr17 60711473 60711633 -34561018 + L1_Mus2 LINE L1 6392 6566 0 3 1048 589 245 21 21 chr17 60711784 60711926 -34560725 + B1_Mur2 SINE Alu 1 142 -7 3 1048 322 298 151 91 chr17 60712171 60712489 -34560162 + MER58D DNA MER1_type 7 343 -43 3 1048 27 49 0 0 chr17 60712694 60712735 -34559916 + AT_rich Low_complexity Low_complexity 1 41 0 3 1048 405 214 0 0 chr17 60712770 60712873 -34559778 + (TA)n Simple_repeat Simple_repeat 1 103 0 3 1048 28 29 0 0 chr17 60713152 60713187 -34559464 + AT_rich Low_complexity Low_complexity 1 35 0 3 1048 234 198 22 65 chr17 60713250 60713342 -34559309 + A-rich Low_complexity Low_complexity 3 90 0 3 1048 255 31 0 0 chr17 60713513 60713545 -34559106 + (TTG)n Simple_repeat Simple_repeat 2 33 0 3 1048 1095 75 0 20 chr17 60713545 60713683 -34558968 - B1_Mm SINE Alu -9 138 1 3 1048 758 285 87 4 chr17 60713711 60713975 -34558676 - Lx7 LINE L1 -584 7112 6827 3 1048 294 50 0 0 chr17 60713997 60714037 -34558614 + (TC)n Simple_repeat Simple_repeat 2 41 0 3 1048 405 0 0 0 chr17 60714037 60714081 -34558570 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1048 292 413 21 14 chr17 60714082 60714227 -34558424 - B3 SINE B2 -70 146 1 3 1048 4089 35 2 0 chr17 60714542 60715028 -34557623 + L1Md_T LINE L1 6096 6582 0 3 1048 628 241 151 108 chr17 60716846 60717264 -34555387 - Lx7 LINE L1 -4 7692 7257 3 1048 269 64 0 41 chr17 60717269 60717318 -34555333 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 3 1048 273 250 0 0 chr17 60717348 60717404 -34555247 - Lx7 LINE L1 -444 7252 7197 3 1048 701 235 75 57 chr17 60717400 60717612 -34555039 + Lx7 LINE L1 6974 7189 -507 3 1048 724 109 18 20 chr17 60718826 60718972 -34553679 + L1_Mur3 LINE L1 2710 2857 -3023 3 1048 21 0 0 0 chr17 60720773 60720794 -34551857 + AT_rich Low_complexity Low_complexity 1 21 0 3 1048 664 212 130 6 chr17 60721070 60721231 -34551420 - ORR1D1 LTR MaLR 0 374 194 3 1048 663 51 0 0 chr17 60721731 60721809 -34550842 + L1Md_F2 LINE L1 5509 5586 -297 3 1048 7650 62 19 2 chr17 60721810 60722788 -34549863 + L1Md_F2 LINE L1 5588 6582 0 3 1048 322 217 63 48 chr17 60722922 60723048 -34549603 - Lx2B LINE L1 -772 6228 6101 3 1048 2097 215 48 6 chr17 60723054 60723569 -34549082 - Lx2B LINE L1 -828 6172 5624 3 1048 1500 250 43 3 chr17 60724439 60724784 -34547867 + ORR1B2 LTR MaLR 1 359 -8 3 1048 507 304 0 33 chr17 60725026 60725179 -34547472 + B1_Mur1 SINE Alu 2 149 0 3 1048 4143 33 0 2 chr17 60725319 60725803 -34546848 - L1Md_F2 LINE L1 -15 6567 6085 3 1048 2460 42 29 0 chr17 60725803 60726110 -34546541 + L1Md_F2 LINE L1 5769 6084 -498 3 1048 270 0 0 0 chr17 60726903 60726933 -34545718 + (T)n Simple_repeat Simple_repeat 1 30 0 3 1048 757 87 122 0 chr17 60726933 60727048 -34545603 - B1_Mus1 SINE Alu -19 129 1 3 1048 24 91 0 0 chr17 60727112 60727178 -34545473 + AT_rich Low_complexity Low_complexity 1 66 0 3 1048 185 188 14 86 chr17 60727327 60727397 -34545254 + L3 LINE CR1 3704 3768 -721 3 1048 1802 319 58 36 chr17 60728099 60728911 -34543740 - Lx9 LINE L1 -272 7372 6543 3 1048 1532 230 91 48 chr17 60729001 60729547 -34543104 + RMER6A LTR ERVK 7 614 -142 3 1048 1999 280 61 11 chr17 60730283 60730941 -34541710 - ORR1B1-int LTR MaLR -317 1192 502 3 1048 267 387 66 16 chr17 60731258 60731563 -34541088 + Lx8 LINE L1 6060 6379 -1094 3 1048 348 269 37 44 chr17 60731726 60731862 -34540789 + Lx7 LINE L1 6743 6877 -819 3 1048 239 255 0 0 chr17 60731862 60731913 -34540738 - MTC-int LTR MaLR -596 662 612 3 1048 371 343 122 45 chr17 60732335 60732689 -34539962 - Charlie25 DNA MER1_type -447 2077 1697 3 1048 246 62 0 0 chr17 60733112 60733144 -34539507 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 3 1048 2480 202 59 37 chr17 60733694 60734369 -34538282 - RMER6C LTR ERVK 0 690 1 3 1048 2512 212 28 67 chr17 60734708 60735426 -34537225 + RMER6C LTR ERVK 1 690 0 3 1048 243 0 0 0 chr17 60735595 60735622 -34537029 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1048 189 74 0 0 chr17 60735805 60735832 -34536819 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 3 1048 216 0 0 0 chr17 60736700 60736724 -34535927 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 1048 396 0 0 0 chr17 60736726 60736770 -34535881 + (TA)n Simple_repeat Simple_repeat 1 44 0 3 1048 3353 169 55 6 chr17 60737407 60738063 -34534588 + Lx2 LINE L1 6305 6992 -5 3 1048 1150 126 0 0 chr17 60738439 60738600 -34534051 + B2_Mm2 SINE B2 2 162 -33 3 1048 183 42 0 0 chr17 60738600 60738624 -34534027 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 3 1048 1150 126 0 0 chr17 60738624 60738637 -34534014 + B2_Mm2 SINE B2 163 175 -20 3 1048 402 186 92 8 chr17 60740146 60740265 -34532386 - Lx7 LINE L1 -8 7688 7560 3 1048 19332 152 33 9 chr17 60740266 60741343 -34531308 + L1_Mm LINE L1 1767 2866 -3017 3 1048 773 95 0 8 chr17 60741343 60741460 -34531191 + (GAAA)n Simple_repeat Simple_repeat 3 118 0 3 1048 19332 152 33 9 chr17 60741460 60742415 -34530236 + L1_Mm LINE L1 2867 3849 -2034 3 1048 189 0 0 0 chr17 60742415 60742436 -34530215 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 3 1048 19332 152 33 9 chr17 60742436 60743967 -34528684 + L1_Mm LINE L1 3850 5414 -469 3 1048 4452 130 13 6 chr17 60743967 60744677 -34527974 + L1_Mus3 LINE L1 5924 6638 0 3 1048 243 220 45 23 chr17 60744700 60744816 -34527835 + A-rich Low_complexity Low_complexity 1 118 0 3 1048 24 0 0 0 chr17 60746674 60746698 -34525953 + AT_rich Low_complexity Low_complexity 1 24 0 3 1048 26 30 0 0 chr17 60747059 60747092 -34525559 + AT_rich Low_complexity Low_complexity 1 33 0 3 1048 1213 279 36 28 chr17 60747592 60747949 -34524702 - MTE2a LTR MaLR -5 374 15 3 1048 1012 153 25 31 chr17 60748266 60748462 -34524189 + Lx2 LINE L1 6087 6281 -716 3 1048 510 150 0 0 chr17 60748459 60748539 -34524112 - Lx2 LINE L1 -644 6353 6274 3 1048 2087 125 72 22 chr17 60748537 60748898 -34523753 + Lx2 LINE L1 6594 6972 -25 3 1048 2369 64 13 0 chr17 60748901 60749215 -34523436 + L1Md_F2 LINE L1 6265 6582 0 3 1048 274 346 28 0 chr17 60749397 60749504 -34523147 + MER31A LTR ERV1 289 398 -87 3 1048 14821 180 31 77 chr17 60750655 60753612 -34519039 + L1_Mur1 LINE L1 2210 5209 -677 3 1048 504 241 22 15 chr17 60753612 60753747 -34518904 + RLTR10D LTR ERVK 1 136 -223 3 1048 246 211 13 101 chr17 60753752 60753831 -34518820 + RLTR10D LTR ERVK 288 359 0 3 1048 14821 180 31 77 chr17 60753831 60754236 -34518415 + L1_Mur1 LINE L1 5215 5628 -258 3 1048 1106 210 139 21 chr17 60754233 60754564 -34518087 + L1_Mur3 LINE L1 3292 3661 -2219 3 1048 389 54 18 0 chr17 60754605 60754661 -34517990 + (TTTA)n Simple_repeat Simple_repeat 2 58 0 3 1048 2262 217 68 17 chr17 60754661 60755187 -34517464 - Lx5 LINE L1 -19 7031 6479 3 1048 396 0 0 0 chr17 60756538 60756582 -34516069 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1048 657 69 0 0 chr17 60756583 60756670 -34515981 + (TATATG)n Simple_repeat Simple_repeat 2 88 0 3 1048 1058 316 11 5 chr17 60756670 60757046 -34515605 + Lx9 LINE L1 7086 7463 -181 3 1048 26 30 0 0 chr17 60757243 60757276 -34515375 + AT_rich Low_complexity Low_complexity 1 33 0 3 1048 21 82 0 0 chr17 60757617 60757666 -34514985 + AT_rich Low_complexity Low_complexity 1 49 0 3 1048 304 356 0 0 chr17 60757694 60757812 -34514839 + (CA)n Simple_repeat Simple_repeat 2 119 0 3 1048 397 341 0 58 chr17 60757879 60758016 -34514635 - RSINE1 SINE B4 -17 148 20 3 1048 7852 162 55 7 chr17 60758092 60759656 -34512995 + L1_Mur2 LINE L1 2804 4442 -1435 3 1048 4129 201 19 20 chr17 60759669 60760567 -34512084 + Lx2B LINE L1 6100 6996 -4 3 1048 21 0 0 0 chr17 60761495 60761516 -34511135 + AT_rich Low_complexity Low_complexity 1 21 0 3 1048 27 0 0 0 chr17 60762874 60762901 -34509750 + AT_rich Low_complexity Low_complexity 1 27 0 3 1048 973 265 66 41 chr17 60763109 60763471 -34509180 + ORR1D1 LTR MaLR 2 372 -2 3 1048 23 0 0 0 chr17 60763968 60763991 -34508660 + AT_rich Low_complexity Low_complexity 1 23 0 3 1048 22 56 0 0 chr17 60764179 60764215 -34508436 + AT_rich Low_complexity Low_complexity 1 36 0 3 1048 583 195 0 52 chr17 60764303 60764438 -34508213 + ORR1A2 LTR MaLR 1 128 -199 3 1048 4384 69 0 0 chr17 60764438 60765004 -34507647 - L1Md_F2 LINE L1 -554 5329 4764 3 1048 1779 42 0 0 chr17 60765001 60765214 -34507437 + L1Md_F2 LINE L1 5374 5586 -297 3 1048 8280 36 0 4 chr17 60765214 60766214 -34506437 + L1Md_F2 LINE L1 5587 6582 0 3 1048 1503 131 18 0 chr17 60766214 60766443 -34506208 + ORR1A2 LTR MaLR 95 327 0 3 1048 400 293 212 40 chr17 60766770 60767072 -34505579 - MLT1A1 LTR MaLR -14 394 41 3 1048 555 56 0 0 chr17 60767445 60767516 -34505135 + (TTTC)n Simple_repeat Simple_repeat 3 73 0 3 1048 427 335 44 44 chr17 60767910 60768082 -34504569 - B3A SINE B2 -10 206 31 3 1048 745 90 8 8 chr17 60768082 60768205 -34504446 - Lx LINE L1 -4 6650 6528 3 1048 427 345 14 14 chr17 60768205 60768235 -34504416 - B3A SINE B2 -165 33 4 3 1048 446 346 19 3 chr17 60768359 60768672 -34503979 - L1_Mur3 LINE L1 -1021 4859 4542 3 1048 438 67 0 51 chr17 60769826 60769905 -34502746 + L1_Mus3 LINE L1 6564 6638 0 3 1048 5469 89 7 66 chr17 60769914 60770767 -34501884 - RLTR13B4 LTR ERVK 0 803 1 3 1048 570 290 85 57 chr17 60770835 60771201 -34501450 + Lx8 LINE L1 6811 7186 -287 3 1048 8543 142 2 6 chr17 60771192 60772666 -34499985 + Lx3A LINE L1 5506 6971 -10 3 1048 21 0 0 0 chr17 60772669 60772690 -34499961 + AT_rich Low_complexity Low_complexity 1 21 0 3 1048 1202 232 149 12 chr17 60772723 60773221 -34499430 + Lx9 LINE L1 7072 7638 -6 3 1048 183 114 0 0 chr17 60773571 60773606 -34499045 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 3 1048 504 267 99 5 chr17 60775003 60775195 -34497456 + B3 SINE B2 1 210 -6 3 1048 200 86 29 0 chr17 60775404 60775439 -34497212 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1048 305 290 43 43 chr17 60775845 60776007 -34496644 + Lx9 LINE L1 5891 6052 -1592 3 1048 1199 237 39 172 chr17 60776011 60776521 -34496130 + MT2B LTR ERVL 3 444 -157 3 1048 459 92 0 0 chr17 60776521 60776586 -34496065 + (TCC)n Simple_repeat Simple_repeat 3 67 0 3 1048 307 331 74 30 chr17 60776592 60776891 -34495760 - L1_Mur2 LINE L1 -119 5758 5447 3 1048 323 306 27 27 chr17 60776927 60777038 -34495613 + Lx8 LINE L1 6549 6659 -814 4 1048 658 360 30 32 chr17 60777052 60777557 -34495094 + Lx8 LINE L1 6733 7236 -237 4 1048 1116 293 26 20 chr17 60777944 60778285 -34494366 - MTD LTR MaLR -12 407 65 4 1048 264 137 0 136 chr17 60778384 60778443 -34494208 - MTD LTR MaLR -350 71 21 4 1048 302 303 109 26 chr17 60778466 60778778 -34493873 + L1MC LINE L1 4724 5061 -1085 4 1048 297 0 0 0 chr17 60779184 60779217 -34493434 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 1048 270 271 8 86 chr17 60779254 60779371 -34493280 - Lx4B LINE L1 -17 7041 6934 4 1048 3942 212 49 9 chr17 60779369 60780269 -34492382 - Lx4B LINE L1 -309 6749 5814 4 1048 38 39 0 0 chr17 60780526 60780578 -34492073 + AT_rich Low_complexity Low_complexity 1 52 0 4 1048 992 308 65 7 chr17 60781730 60782133 -34490518 + Lx7 LINE L1 6625 7050 -646 4 1048 31 0 0 0 chr17 60782319 60782350 -34490301 + AT_rich Low_complexity Low_complexity 1 31 0 4 1048 251 62 0 0 chr17 60782350 60782382 -34490269 - L1_Mus2 LINE L1 -615 6021 5990 4 1048 3481 83 28 6 chr17 60782376 60782872 -34489779 + L1_Mus2 LINE L1 6022 6528 -38 4 1048 378 0 0 0 chr17 60782902 60782944 -34489707 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 4 1048 271 90 51 13 chr17 60783008 60783087 -34489564 + T-rich Low_complexity Low_complexity 3 84 0 4 1048 21 0 0 0 chr17 60785071 60785092 -34487559 + AT_rich Low_complexity Low_complexity 1 21 0 4 1048 28 0 0 0 chr17 60785178 60785206 -34487445 + AT_rich Low_complexity Low_complexity 1 28 0 4 1048 552 100 0 0 chr17 60785219 60785299 -34487352 + (TA)n Simple_repeat Simple_repeat 1 80 0 4 1048 453 19 0 0 chr17 60785404 60785458 -34487193 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 4 1048 935 231 91 29 chr17 60785503 60785744 -34486907 - RMER19B LTR ERVK -321 581 326 4 1048 496 355 9 5 chr17 60785773 60785988 -34486663 - Lx8 LINE L1 -766 6707 6492 4 1048 29 60 0 0 chr17 60786683 60786733 -34485918 + AT_rich Low_complexity Low_complexity 1 50 0 4 1048 257 277 0 0 chr17 60786903 60786968 -34485683 - Lx7 LINE L1 -274 7422 7358 4 1048 366 390 19 0 chr17 60786970 60787129 -34485522 - B3 SINE B2 -54 162 1 4 1048 231 146 0 0 chr17 60787171 60787212 -34485439 + (TGG)n Simple_repeat Simple_repeat 2 42 0 4 1048 513 0 0 0 chr17 60787214 60787271 -34485380 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 1048 221 227 0 0 chr17 60787894 60787938 -34484713 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1048 422 241 9 0 chr17 60788926 60789034 -34483617 + (TA)n Simple_repeat Simple_repeat 1 109 0 4 1048 429 186 9 26 chr17 60789051 60789167 -34483484 + (TATATG)n Simple_repeat Simple_repeat 6 119 0 4 1048 1975 298 91 68 chr17 60790097 60791281 -34481370 + Lx9 LINE L1 6410 7621 -23 4 1048 229 296 83 14 chr17 60791446 60791518 -34481133 + B4A SINE B4 2 78 -214 4 1048 474 169 0 0 chr17 60791638 60791727 -34480924 + (CA)n Simple_repeat Simple_repeat 2 90 0 4 1048 233 121 0 0 chr17 60791727 60791760 -34480891 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 1048 50 31 0 0 chr17 60791883 60791947 -34480704 + AT_rich Low_complexity Low_complexity 1 64 0 4 1048 241 320 0 0 chr17 60792147 60792222 -34480429 + (CA)n Simple_repeat Simple_repeat 2 76 0 4 1048 24 32 0 0 chr17 60792413 60792444 -34480207 + AT_rich Low_complexity Low_complexity 1 31 0 4 1048 5188 138 3 18 chr17 60792828 60793678 -34478973 - Lx2 LINE L1 0 6997 6160 4 1048 272 208 10 0 chr17 60793856 60793957 -34478694 + GA-rich Low_complexity Low_complexity 2 103 0 4 1048 369 279 52 11 chr17 60794286 60794460 -34478191 + L1MB3 LINE L1 6000 6180 -3 4 1048 294 87 0 0 chr17 60794590 60794636 -34478015 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 4 1048 3645 116 62 12 chr17 60794636 60795229 -34477422 - Lx3A LINE L1 -13 6968 6346 4 1048 724 99 0 0 chr17 60795229 60795330 -34477321 + Lx3A LINE L1 6232 6332 -649 4 1048 277 272 97 0 chr17 60795329 60795443 -34477208 + L1_Rod LINE L1 1768 1892 -3955 4 1048 3174 57 0 5 chr17 60795730 60796134 -34476517 - L1Md_F2 LINE L1 -14 6568 6167 4 1048 7152 48 1 0 chr17 60796134 60797111 -34475540 + L1Md_F2 LINE L1 4958 5936 -646 4 1048 314 296 126 38 chr17 60797344 60797583 -34475068 - L1M4c LINE L1 -2208 4174 3915 4 1048 292 380 41 59 chr17 60797947 60798338 -34474313 - L1M4c LINE L1 -5755 629 246 4 1048 278 310 34 40 chr17 60798384 60798532 -34474119 + B1F1 SINE Alu 3 149 0 4 1048 19239 137 13 40 chr17 60798908 60802980 -34469671 + L1_Mus1 LINE L1 261 4253 -1630 4 1048 4285 136 13 1 chr17 60802959 60802988 -34469663 + L1_Mus1 LINE L1 5206 5234 -649 4 1048 186 43 0 0 chr17 60802988 60803011 -34469640 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 1048 7212 101 7 0 chr17 60803011 60804330 -34468321 + L1_Mus1 LINE L1 5235 6567 0 4 1048 523 319 28 32 chr17 60804788 60805005 -34467646 - B3 SINE B2 0 216 1 4 1048 282 115 0 0 chr17 60805374 60805426 -34467225 + (T)n Simple_repeat Simple_repeat 1 52 0 4 1048 714 128 0 0 chr17 60806724 60806841 -34465810 + (TTCC)n Simple_repeat Simple_repeat 1 117 0 4 1048 6062 194 28 14 chr17 60806841 60808295 -34464356 - Lx3C LINE L1 -175 6801 5340 4 1048 1812 240 35 9 chr17 60808291 60808750 -34463901 + Lx4B LINE L1 5883 6353 -705 4 1048 244 286 50 99 chr17 60808883 60809065 -34463586 - MER104 DNA Tc2 -4 177 5 4 1048 667 212 0 0 chr17 60809523 60809641 -34463010 - RMER1B Other Other -351 715 598 4 1048 350 341 10 72 chr17 60809694 60809887 -34462764 + Lx8 LINE L1 6200 6380 -1093 4 1048 1066 71 0 0 chr17 60809892 60810032 -34462619 + B1_Mus1 SINE Alu 8 147 -1 4 1048 1096 332 45 105 chr17 60810038 60810576 -34462075 + Lx9 LINE L1 6521 7055 -589 4 1048 843 320 63 9 chr17 60810576 60810926 -34461725 + ORR1D2 LTR MaLR 2 370 0 4 1048 1096 332 45 105 chr17 60810926 60810966 -34461685 + Lx9 LINE L1 7056 7080 -564 4 1048 1438 109 5 0 chr17 60810966 60811186 -34461465 + L1_Mus2 LINE L1 6344 6564 -2 4 1048 1096 332 45 105 chr17 60811186 60811509 -34461142 + Lx9 LINE L1 7081 7369 -275 4 1048 207 250 0 0 chr17 60811586 60811630 -34461021 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1048 768 324 40 30 chr17 60812447 60812749 -34459902 + ORR1D2 LTR MaLR 1 305 -65 4 1048 251 324 38 38 chr17 60813074 60813180 -34459471 + RSINE1 SINE B4 12 117 -48 4 1048 233 91 0 43 chr17 60813196 60813242 -34459409 + (TATAA)n Simple_repeat Simple_repeat 1 44 0 4 1048 23 33 0 0 chr17 60813431 60813461 -34459190 + AT_rich Low_complexity Low_complexity 1 30 0 4 1048 382 178 22 0 chr17 60813485 60813575 -34459076 + (TA)n Simple_repeat Simple_repeat 1 92 0 4 1048 300 83 0 0 chr17 60813574 60813622 -34459029 + (GA)n Simple_repeat Simple_repeat 2 49 0 4 1048 21 36 0 0 chr17 60814054 60814082 -34458569 + AT_rich Low_complexity Low_complexity 1 28 0 4 1048 21 0 0 0 chr17 60814393 60814414 -34458237 + AT_rich Low_complexity Low_complexity 1 21 0 4 1048 1346 127 161 35 chr17 60815190 60815280 -34457371 - Lx2 LINE L1 -1 6996 6867 4 1048 204 40 0 0 chr17 60815280 60815305 -34457346 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 4 1048 1346 127 161 35 chr17 60815305 60815500 -34457151 - Lx2 LINE L1 -131 6866 6675 4 1048 451 105 0 11 chr17 60815668 60815755 -34456896 + Lx2A LINE L1 6923 7008 0 4 1048 296 192 0 19 chr17 60815916 60815964 -34456687 - RLTR31_Mm LTR ERVK 0 561 515 4 1048 2023 90 130 6 chr17 60815964 60816311 -34456340 + RLTR10 LTR ERVK 1 390 0 4 1048 3122 191 58 13 chr17 60816311 60816933 -34455718 - RLTR17 LTR ERVK -42 650 1 4 16 4480 110 6 10 chr17 60817035 60817819 -34454832 - L1_Mus3 LINE L1 -702 5936 5154 4 1049 4225 118 24 30 chr17 60817821 60818527 -34454124 + L1_Mus3 LINE L1 5935 6636 -2 4 1049 1184 73 0 6 chr17 60818943 60819109 -34453542 + L1_Mus1 LINE L1 6401 6565 -2 4 1049 2831 90 29 2 chr17 60819417 60819830 -34452821 - L1_Mus3 LINE L1 -4 6634 6211 4 1049 354 307 50 89 chr17 60820080 60820365 -34452286 + L1MD1 LINE L1 5381 5668 -691 4 1049 21 36 0 0 chr17 60820383 60820411 -34452240 + AT_rich Low_complexity Low_complexity 1 28 0 4 1049 2524 220 114 18 chr17 60820723 60821032 -34451619 - RMER6C LTR ERVK 0 690 337 4 1049 441 0 0 0 chr17 60821032 60821081 -34451570 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 1049 2524 220 114 18 chr17 60821081 60821330 -34451321 - RMER6C LTR ERVK -354 336 70 4 1049 1563 208 188 24 chr17 60821330 60821922 -34450729 + RMER6C LTR ERVK 2 690 0 4 1049 2524 220 114 18 chr17 60821922 60821991 -34450660 - RMER6C LTR ERVK -621 69 1 4 1049 347 310 40 40 chr17 60822354 60822576 -34450075 + L1MD1 LINE L1 6021 6242 0 4 1049 223 175 0 0 chr17 60822963 60823003 -34449648 + (TCTA)n Simple_repeat Simple_repeat 2 41 0 4 1049 252 150 0 0 chr17 60823335 60823375 -34449276 - L1_Mur3 LINE L1 -682 5198 5159 4 1049 279 79 0 0 chr17 60823495 60823533 -34449118 + (CTTG)n Simple_repeat Simple_repeat 2 39 0 4 1049 29 60 0 0 chr17 60823646 60823696 -34448955 + AT_rich Low_complexity Low_complexity 1 50 0 4 1049 777 90 0 0 chr17 60824094 60824205 -34448446 + (CA)n Simple_repeat Simple_repeat 1 111 0 4 1049 477 0 0 0 chr17 60824974 60825027 -34447624 + (TC)n Simple_repeat Simple_repeat 2 54 0 4 1049 2230 85 9 9 chr17 60825207 60825528 -34447123 + L1_Mus3 LINE L1 6318 6638 0 4 1049 396 0 0 0 chr17 60826300 60826344 -34446307 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 4 1049 318 341 73 32 chr17 60828777 60828905 -34443746 + Lx7 LINE L1 6910 7056 -417 4 1049 333 0 0 0 chr17 60828905 60828942 -34443709 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 4 1049 318 335 72 33 chr17 60828942 60829120 -34443531 + Lx7 LINE L1 7037 7234 -239 4 1049 298 57 19 19 chr17 60829129 60829183 -34443468 + (TTTTA)n Simple_repeat Simple_repeat 2 55 0 4 1049 21 0 0 0 chr17 60829743 60829764 -34442887 + AT_rich Low_complexity Low_complexity 1 21 0 4 1049 928 122 0 13 chr17 60829914 60830063 -34442588 + B1_Mus2 SINE Alu 1 147 0 4 1049 218 214 0 0 chr17 60831026 60831068 -34441583 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 4 1049 23 54 0 0 chr17 60831106 60831143 -34441508 + AT_rich Low_complexity Low_complexity 1 37 0 4 1049 288 309 101 47 chr17 60832198 60832327 -34440324 + MTE2a LTR MaLR 1 136 -243 4 1049 309 320 62 0 chr17 60832265 60832362 -34440289 + MT2A LTR ERVL 75 177 -356 4 1049 450 0 0 0 chr17 60832413 60832463 -34440188 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1049 928 61 104 15 chr17 60833370 60833504 -34439147 - B1_Mus1 SINE Alu -1 147 2 4 1049 230 240 18 213 chr17 60833577 60833741 -34438910 - MTD-int LTR MaLR -193 1065 934 4 1049 1596 97 18 0 chr17 60833743 60833969 -34438682 + Lx3A LINE L1 6468 6697 -284 4 1049 578 311 62 82 chr17 60833975 60834329 -34438322 - MTD-int LTR MaLR -309 949 603 4 1049 186 43 0 0 chr17 60834334 60834357 -34438294 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1049 459 0 0 0 chr17 60834357 60834407 -34438244 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 1049 5067 61 0 2 chr17 60834407 60835035 -34437616 - L1Md_F2 LINE L1 -39 6543 5917 5 1049 622 298 178 83 chr17 60835035 60835591 -34437060 - MTD-int LTR MaLR -644 614 6 4 1049 372 284 77 14 chr17 60835596 60835739 -34436912 - MTD LTR MaLR 0 419 268 4 1049 4716 196 33 87 chr17 60836604 60836705 -34435946 + L1_Mur2 LINE L1 2353 2452 -3425 5 1049 2270 44 0 0 chr17 60836705 60836977 -34435674 + L1Md_T LINE L1 6309 6580 -2 5 1049 4716 196 33 87 chr17 60836977 60837000 -34435651 + L1_Mur2 LINE L1 2453 2476 -3401 5 1049 279 0 0 0 chr17 60837000 60837031 -34435620 + (TAA)n Simple_repeat Simple_repeat 2 32 0 5 1049 4716 196 33 87 chr17 60837031 60838118 -34434533 + L1_Mur2 LINE L1 2477 3467 -2410 5 1049 423 38 0 0 chr17 60838118 60838171 -34434480 + (GA)n Simple_repeat Simple_repeat 1 53 0 5 1049 4716 196 33 87 chr17 60838171 60838375 -34434276 + L1_Mur2 LINE L1 3468 3691 -2186 5 1049 1507 162 4 29 chr17 60838375 60838655 -34433996 + Lx LINE L1 6375 6647 -7 5 1049 822 184 142 0 chr17 60838662 60838852 -34433799 + Lx5 LINE L1 5798 6014 -1036 5 1049 243 250 47 23 chr17 60839839 60839925 -34432726 - Lx6 LINE L1 -53 7407 7320 5 1049 14906 111 86 38 chr17 60839924 60841141 -34431510 + Lx3_Mus LINE L1 2990 4241 -1645 5 1049 6394 47 2 0 chr17 60841141 60841932 -34430719 - L1Md_A LINE L1 0 6582 5790 5 1049 14906 111 86 38 chr17 60841932 60842191 -34430460 + Lx3_Mus LINE L1 4242 4638 -1248 5 1049 257 0 30 0 chr17 60842191 60842224 -34430427 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 1049 14906 111 86 38 chr17 60842224 60842273 -34430378 + Lx3_Mus LINE L1 4639 4652 -1234 5 1049 1053 123 0 0 chr17 60842273 60842419 -34430232 - B1_Mus2 SINE Alu -1 146 1 5 1049 14906 111 86 38 chr17 60842419 60843063 -34429588 + Lx3_Mus LINE L1 4653 5282 -604 5 1049 189 0 0 0 chr17 60843063 60843084 -34429567 + (CAAA)n Simple_repeat Simple_repeat 3 23 0 5 1049 14906 111 67 45 chr17 60843084 60843921 -34428730 + Lx3_Mus LINE L1 5283 6041 -968 5 1049 585 0 0 0 chr17 60843921 60843986 -34428665 + (GGGA)n Simple_repeat Simple_repeat 4 68 0 5 1049 8720 113 21 63 chr17 60843986 60844929 -34427722 + Lx3_Mus LINE L1 6042 7009 0 5 1049 26 0 0 0 chr17 60844929 60844955 -34427696 + AT_rich Low_complexity Low_complexity 1 26 0 5 1049 640 276 63 15 chr17 60844955 60845161 -34427490 - Lx6 LINE L1 -18 7442 7227 5 1049 567 0 0 0 chr17 60845278 60845341 -34427310 + (TTATA)n Simple_repeat Simple_repeat 2 64 0 5 1049 1177 305 136 12 chr17 60845427 60846345 -34426306 - L1M2 LINE L1 -1693 4450 3419 5 1049 573 133 41 24 chr17 60846808 60846977 -34425674 + (TCTA)n Simple_repeat Simple_repeat 1 172 0 5 1049 24 77 0 0 chr17 60847582 60847634 -34425017 + AT_rich Low_complexity Low_complexity 1 52 0 5 1049 22 35 0 0 chr17 60847866 60847895 -34424756 + AT_rich Low_complexity Low_complexity 1 29 0 5 1049 2691 217 41 85 chr17 60847895 60848297 -34424354 - Lx2 LINE L1 0 6997 6616 5 1049 4953 76 34 1 chr17 60848297 60848965 -34423686 - L1_Mus2 LINE L1 -1 6565 5876 5 1049 2691 217 41 85 chr17 60848965 60849432 -34423219 - Lx2 LINE L1 -382 6615 6166 5 1049 386 126 11 33 chr17 60849406 60849496 -34423155 - L1_Mur2 LINE L1 -535 5342 5255 5 1049 7506 167 15 35 chr17 60849493 60850242 -34422409 - L1_Mur2 LINE L1 -731 5146 4420 5 1049 1024 110 0 0 chr17 60850242 60850387 -34422264 - B1_Mus1 SINE Alu -1 147 3 5 1049 7506 167 15 35 chr17 60850387 60851141 -34421510 - L1_Mur2 LINE L1 -1458 4419 3673 5 1049 207 196 0 0 chr17 60851375 60851421 -34421230 + T-rich Low_complexity Low_complexity 3 48 0 5 1049 1507 60 0 0 chr17 60851440 60851623 -34421028 + L1Md_F2 LINE L1 6073 6255 -327 5 1049 1767 165 15 9 chr17 60851777 60852102 -34420549 - Lx2 LINE L1 -2 6995 6669 5 1049 21 0 0 0 chr17 60852334 60852355 -34420296 + AT_rich Low_complexity Low_complexity 1 21 0 5 1049 6889 30 19 1 chr17 60853025 60853856 -34418795 - L1Md_F2 LINE L1 -15 6567 5722 5 1049 213 39 0 0 chr17 60854038 60854064 -34418587 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 5 1049 811 338 19 42 chr17 60854067 60854376 -34418275 - Lx5 LINE L1 -17 7033 6732 5 1049 369 302 34 48 chr17 60854686 60854832 -34417819 - RMER15 LTR ERVL -403 172 29 5 1049 250 396 0 0 chr17 60854910 60855021 -34417630 - RMER15-int LTR ERVL -3 4996 4886 5 1049 400 340 108 19 chr17 60855524 60855737 -34416914 - Lx8 LINE L1 -971 6502 6271 5 1049 654 365 10 26 chr17 60855835 60856139 -34416512 - RMER15-int LTR ERVL -2612 2387 2089 5 1049 2483 140 32 41 chr17 60856839 60857300 -34415351 + Lx3C LINE L1 6517 6973 -3 5 1049 28 71 0 0 chr17 60857301 60857357 -34415294 + AT_rich Low_complexity Low_complexity 1 56 0 5 1049 371 302 147 7 chr17 60857471 60857621 -34415030 - RMER15-int LTR ERVL -3545 1454 1284 5 1049 3276 92 8 2 chr17 60857704 60858184 -34414467 - L1_Mus3 LINE L1 -1 6637 6155 5 1049 276 30 0 0 chr17 60858194 60858227 -34414424 + (TTA)n Simple_repeat Simple_repeat 1 33 0 5 1049 291 222 16 0 chr17 60858276 60858339 -34414312 - RMER15-int LTR ERVL -4270 729 666 5 1049 199 0 31 31 chr17 60858722 60858754 -34413897 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 1049 214 271 0 0 chr17 60858925 60858973 -34413678 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1049 1956 278 60 67 chr17 60859025 60859958 -34412693 - Lx9 LINE L1 0 7644 6718 5 1049 261 0 0 0 chr17 60859966 60859995 -34412656 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1049 449 296 60 3 chr17 60860172 60860321 -34412330 - MTD LTR MaLR -94 306 148 5 1049 1055 96 0 33 chr17 60860819 60860957 -34411694 + B1_Mus2 SINE Alu 2 135 -12 5 1049 207 0 0 0 chr17 60860957 60860980 -34411671 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 1049 1055 96 0 33 chr17 60860980 60860992 -34411659 + B1_Mus2 SINE Alu 136 147 0 5 1049 180 0 0 0 chr17 60861005 60861025 -34411626 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 5 1049 22 0 0 0 chr17 60861032 60861054 -34411597 + AT_rich Low_complexity Low_complexity 1 22 0 5 1049 1431 85 0 0 chr17 60861138 60861327 -34411324 - L1_Mus3 LINE L1 -386 6252 6064 5 1049 597 180 0 0 chr17 60861326 60861426 -34411225 + L1_Mur1 LINE L1 5047 5146 -740 5 1049 3679 144 43 16 chr17 60861597 60862219 -34410432 - Lx4A LINE L1 -29 7029 6391 5 1049 2208 118 6 31 chr17 60862690 60863001 -34409650 + L1_Mus3 LINE L1 6284 6591 -47 5 1049 3426 25 2 0 chr17 60863001 60863396 -34409255 + MTA_Mm LTR MaLR 1 396 0 5 1049 2208 118 6 31 chr17 60863396 60863441 -34409210 + L1_Mus3 LINE L1 6592 6631 -7 5 1049 21 36 0 0 chr17 60863816 60863844 -34408807 + AT_rich Low_complexity Low_complexity 1 28 0 5 1049 536 355 6 34 chr17 60865964 60866169 -34406482 - B3A SINE B2 -11 205 12 5 1049 212 200 0 18 chr17 60868138 60868194 -34404457 + A-rich Low_complexity Low_complexity 2 56 0 5 1049 22 35 0 0 chr17 60868735 60868764 -34403887 + AT_rich Low_complexity Low_complexity 1 29 0 5 1049 232 356 16 50 chr17 60868933 60869054 -34403597 + ID_B1 SINE B4 100 216 -8 5 1049 237 240 0 0 chr17 60869214 60869264 -34403387 + (ATG)n Simple_repeat Simple_repeat 3 52 0 5 1049 1059 221 226 52 chr17 60870590 60870952 -34401699 + RMER2 LTR ERV1 1 425 -142 5 1049 835 64 31 71 chr17 60871242 60871567 -34401084 + (TAGA)n Simple_repeat Simple_repeat 1 311 0 5 1049 30 93 0 0 chr17 60872125 60872211 -34400440 + AT_rich Low_complexity Low_complexity 1 86 0 5 1049 6979 130 54 12 chr17 60872329 60873524 -34399127 - Lx3_Mus LINE L1 -1 7008 5763 5 1049 438 283 25 44 chr17 60873524 60873696 -34398955 + RLTR43A LTR ERVK 189 365 0 5 1049 3095 82 0 0 chr17 60873696 60874096 -34398555 - L1_Mur1 LINE L1 -198 5688 5289 5 1049 39 22 0 0 chr17 60874334 60874380 -34398271 + AT_rich Low_complexity Low_complexity 1 46 0 5 1049 1625 327 85 17 chr17 60874629 60875276 -34397375 - MTE2b-int LTR MaLR -360 1220 530 5 1049 464 317 87 0 chr17 60875262 60875423 -34397228 - MTE2b-int LTR MaLR -1405 175 1 5 1049 811 349 59 7 chr17 60875423 60875729 -34396922 - MTE2b LTR MaLR 0 379 58 5 1049 268 235 0 0 chr17 60876416 60876467 -34396184 + Lx8 LINE L1 6100 6150 -1323 5 1049 3644 197 95 14 chr17 60876531 60877255 -34395396 + Lx9 LINE L1 6703 7493 -151 5 1049 456 19 0 0 chr17 60877255 60877308 -34395343 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1049 3644 197 95 14 chr17 60877308 60877453 -34395198 + Lx9 LINE L1 7494 7642 -2 5 1049 23 0 0 0 chr17 60878122 60878145 -34394506 + AT_rich Low_complexity Low_complexity 1 23 0 5 1049 21 0 0 0 chr17 60878225 60878246 -34394405 + AT_rich Low_complexity Low_complexity 1 21 0 5 1049 3044 113 21 50 chr17 60879003 60879526 -34393125 + Lx LINE L1 6147 6654 0 5 1049 1998 198 159 111 chr17 60879789 60880476 -34392175 - RMER6D LTR ERVK 0 720 1 5 1049 207 111 21 62 chr17 60880563 60880611 -34392040 + A-rich Low_complexity Low_complexity 1 46 0 5 1049 404 377 39 22 chr17 60880730 60880909 -34391742 + B4A SINE B4 43 224 -68 5 1049 1363 248 27 35 chr17 60880920 60881292 -34391359 - ORR1D1 LTR MaLR -5 369 1 5 1049 29 47 0 0 chr17 60881928 60881971 -34390680 + AT_rich Low_complexity Low_complexity 1 43 0 5 1049 4609 132 6 0 chr17 60881971 60882678 -34389973 - L1_Mus3 LINE L1 -2 6636 5926 5 1049 7365 153 34 15 chr17 60882680 60884583 -34388068 - L1VL4 LINE L1 -1462 2355 474 5 1049 3304 143 73 20 chr17 60884652 60885238 -34387413 - Lx3A LINE L1 -2 6979 6363 5 1049 2429 65 0 3 chr17 60885238 60885564 -34387087 - IAPEY2_LTR LTR ERVK 0 357 33 5 1049 882 111 8 0 chr17 60885575 60885701 -34386950 - Lx3A LINE L1 -613 6368 6242 5 1049 242 118 0 0 chr17 60885789 60885823 -34386828 - Lx3A LINE L1 -741 6235 6202 5 1049 519 83 32 16 chr17 60886579 60886702 -34385949 + (TA)n Simple_repeat Simple_repeat 1 125 0 5 1049 462 344 40 15 chr17 60886843 60887171 -34385480 - L1M2 LINE L1 -1158 4985 4650 5 1049 198 71 0 0 chr17 60887209 60887237 -34385414 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 5 1049 1152 57 0 0 chr17 60887243 60887384 -34385267 - B1_Mus1 SINE Alu -7 141 1 5 1049 249 309 100 7 chr17 60887450 60887590 -34385061 - L1_Mur2 LINE L1 -1304 4573 4421 5 1049 304 279 167 11 chr17 60887590 60887764 -34384887 - L1M2 LINE L1 -1705 4438 4238 5 1049 21 0 0 0 chr17 60888401 60888422 -34384229 + AT_rich Low_complexity Low_complexity 1 21 0 5 1049 345 259 24 0 chr17 60888535 60888620 -34384031 + MTD LTR MaLR 3 89 -330 5 1049 293 292 125 111 chr17 60888623 60888839 -34383812 + MTD LTR MaLR 201 419 0 5 1049 2344 265 90 67 chr17 60888905 60889741 -34382910 + Lx7 LINE L1 6500 7354 -342 5 1049 426 53 0 0 chr17 60889741 60889798 -34382853 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 1049 1162 227 23 35 chr17 60889894 60890236 -34382415 + Lx7 LINE L1 7359 7696 0 5 1049 25 0 0 0 chr17 60890240 60890265 -34382386 + AT_rich Low_complexity Low_complexity 1 25 0 5 1049 1653 353 67 44 chr17 60890486 60890699 -34381952 - ORR1E-int LTR MaLR -62 1518 1278 5 1049 4791 35 0 0 chr17 60890699 60891265 -34381386 + L1Md_T LINE L1 6017 6582 0 5 1049 1653 353 67 44 chr17 60891265 60891979 -34380672 - ORR1E-int LTR MaLR -303 1277 570 5 1049 940 285 47 47 chr17 60892264 60892628 -34380023 + MTE2b LTR MaLR 3 366 -13 5 1049 1208 340 68 12 chr17 60892646 60893132 -34379519 - ORR1E-int LTR MaLR -1054 526 14 5 1049 288 299 52 37 chr17 60893141 60893296 -34379355 - ORR1E LTR MaLR -8 371 210 5 1049 313 386 30 30 chr17 60893443 60893611 -34379040 - ORR1E LTR MaLR -183 176 9 5 1049 999 103 0 0 chr17 60894368 60894514 -34378137 + (GAAA)n Simple_repeat Simple_repeat 2 147 0 5 1049 270 0 0 0 chr17 60894783 60894813 -34377838 + (A)n Simple_repeat Simple_repeat 1 30 0 5 1049 1153 75 0 0 chr17 60894931 60895078 -34377573 + B1_Mus1 SINE Alu 1 147 -1 5 1049 396 35 45 45 chr17 60895078 60895167 -34377484 + (CAAAAA)n Simple_repeat Simple_repeat 1 89 0 5 1049 402 21 0 0 chr17 60895187 60895234 -34377417 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 1049 3841 112 30 7 chr17 60896885 60897453 -34375198 - MT2B2 LTR ERVL 0 584 4 6 1049 971 250 133 28 chr17 60897589 60897951 -34374700 - Lx2B LINE L1 -8 6992 6593 6 1049 740 190 212 12 chr17 60897971 60898211 -34374440 - RMER1C Other Other -28 1314 1027 6 1049 24 0 0 0 chr17 60898738 60898762 -34373889 + AT_rich Low_complexity Low_complexity 1 24 0 6 1049 2242 127 6 8 chr17 60898927 60899285 -34373366 + Lx LINE L1 6293 6649 -5 6 1049 248 0 0 30 chr17 60900020 60900053 -34372598 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 6 1049 642 223 14 0 chr17 60900446 60900585 -34372066 + RMER1B Other Other 923 1063 -3 6 1049 689 321 82 59 chr17 60900603 60900937 -34371714 + Lx9 LINE L1 6957 7315 -329 6 1049 396 0 0 0 chr17 60900937 60900981 -34371670 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 6 1049 689 321 82 59 chr17 60900981 60901152 -34371499 + Lx9 LINE L1 7316 7496 -148 6 1049 525 92 0 0 chr17 60901152 60901228 -34371423 + (TG)n Simple_repeat Simple_repeat 1 76 0 6 1049 689 321 82 59 chr17 60901228 60901394 -34371257 + Lx9 LINE L1 7497 7643 -1 6 1049 710 101 9 0 chr17 60903331 60903440 -34369211 + (TA)n Simple_repeat Simple_repeat 1 110 0 6 1049 240 35 0 0 chr17 60903907 60903936 -34368715 + (TA)n Simple_repeat Simple_repeat 1 29 0 6 1049 197 196 18 0 chr17 60903954 60904010 -34368641 + (CA)n Simple_repeat Simple_repeat 1 57 0 6 1049 183 260 173 27 chr17 60904051 60904126 -34368525 + L2 LINE L2 2825 2910 -509 6 1049 22 0 0 0 chr17 60905090 60905112 -34367539 + AT_rich Low_complexity Low_complexity 1 22 0 6 1049 5397 97 24 2 chr17 60905699 60906497 -34366154 + L1_Mur1 LINE L1 4971 5785 -101 6 1049 5697 129 24 15 chr17 60906497 60907448 -34365203 + Lx3A LINE L1 6011 6970 -11 6 1049 21 0 0 0 chr17 60907448 60907469 -34365182 + AT_rich Low_complexity Low_complexity 1 21 0 6 1049 336 370 51 60 chr17 60909222 60909558 -34363093 + Lx8 LINE L1 7107 7439 -34 6 1049 23 68 0 0 chr17 60910004 60910048 -34362603 + AT_rich Low_complexity Low_complexity 1 44 0 6 1049 1303 291 71 60 chr17 60910133 60910821 -34361830 - Lx8 LINE L1 -132 7341 6646 6 1049 461 311 11 0 chr17 60910833 60911016 -34361635 - L1M2 LINE L1 -705 5595 5411 6 1049 24 53 0 0 chr17 60911301 60911339 -34361312 + AT_rich Low_complexity Low_complexity 1 38 0 6 1049 1158 331 79 29 chr17 60911515 60912263 -34360388 - Lx9 LINE L1 -325 7319 6535 6 1049 738 270 104 47 chr17 60912480 60912974 -34359677 - Lx9 LINE L1 -1681 5963 5401 6 1049 1776 280 96 52 chr17 60913049 60914292 -34358359 + L1_Rod LINE L1 4084 5381 -466 6 1049 192 111 0 0 chr17 60914391 60914427 -34358224 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 6 1049 683 344 89 28 chr17 60914723 60915151 -34357500 - Lx9 LINE L1 -630 7014 6561 6 1049 441 269 14 36 chr17 60915628 60915767 -34356884 + MTC LTR MaLR 1 136 -285 6 1049 315 365 39 56 chr17 60915849 60916029 -34356622 + MTE-int LTR MaLR 75 251 -1329 6 1049 2160 137 3 3 chr17 60916082 60916427 -34356224 + L1_Mus4 LINE L1 6286 6630 -6 6 1049 1301 247 16 50 chr17 60916433 60916817 -34355834 - L1_Mur3 LINE L1 -203 5677 5307 6 1049 3257 118 26 2 chr17 60916818 60917409 -34355242 - L1_Mus4 LINE L1 -668 5968 5378 6 1049 1917 99 57 7 chr17 60917409 60917705 -34354946 + L1_Mus4 LINE L1 6325 6635 -1 6 1049 3257 190 74 7 chr17 60917705 60917925 -34354726 - L1_Mus4 LINE L1 -506 5377 5108 6 1049 1865 220 64 9 chr17 60917967 60918512 -34354139 + L1_Mur3 LINE L1 2930 3504 -2376 6 1049 26059 62 3 8 chr17 60918504 60922716 -34349935 - L1Md_F3 LINE L1 -1 6583 2395 6 1049 35358 36 1 0 chr17 60922716 60928759 -34343892 + L1Md_T LINE L1 1 5589 -297 6 1049 8954 7 0 0 chr17 60928759 60929755 -34342896 + L1Md_T LINE L1 5590 6585 0 6 1049 3889 5 0 0 chr17 60929754 60930187 -34342464 + L1Md_T LINE L1 6150 6582 0 6 1049 1482 29 0 0 chr17 60930196 60930371 -34342280 - L1Md_F3 LINE L1 -3475 2408 2234 6 1049 5677 156 12 20 chr17 60930369 60931608 -34341043 - L1Md_F3 LINE L1 -4423 1460 233 6 1049 306 115 0 0 chr17 60931932 60931984 -34340667 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 1049 20303 104 5 211 chr17 60932100 60936740 -34335911 - L1Md_F2 LINE L1 -2 6580 3228 6 1049 7438 75 2 4 chr17 60936740 60937737 -34334914 + L1Md_F2 LINE L1 5588 6582 0 6 1049 20303 111 5 268 chr17 60937737 60937887 -34334764 - L1_Mm LINE L1 -2656 3227 3227 6 1049 180 0 0 0 chr17 60937887 60937907 -34334744 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 6 1049 20303 131 20 205 chr17 60937907 60941093 -34331558 - L1Md_F2 LINE L1 -2656 3227 265 6 1049 317 50 0 0 chr17 60942276 60942316 -34330335 + RMER6D LTR ERVK 2 41 -679 6 1049 348 161 0 0 chr17 60945348 60945410 -34327241 + (TA)n Simple_repeat Simple_repeat 2 63 0 6 1049 25 0 0 0 chr17 60945743 60945768 -34326883 + AT_rich Low_complexity Low_complexity 1 25 0 6 1049 391 153 0 20 chr17 60946032 60946132 -34326519 + (CA)n Simple_repeat Simple_repeat 2 99 0 6 1049 1151 299 107 39 chr17 60946169 60946665 -34325986 + L1_Mur3 LINE L1 4753 5298 -582 6 1049 4553 124 24 16 chr17 60946665 60947411 -34325240 + Lx2A LINE L1 6256 7007 -1 6 1049 1151 299 107 39 chr17 60947411 60947846 -34324805 + L1_Mur3 LINE L1 5299 5747 -133 6 131 679 302 48 31 chr17 60948314 60948662 -34323989 + Lx9 LINE L1 6717 7216 -428 6 1050 38 39 0 0 chr17 60948722 60948774 -34323877 + AT_rich Low_complexity Low_complexity 1 52 0 6 1050 32 0 0 0 chr17 60948822 60948854 -34323797 + AT_rich Low_complexity Low_complexity 1 32 0 6 1050 23 0 0 0 chr17 60949205 60949228 -34323423 + AT_rich Low_complexity Low_complexity 1 23 0 6 1050 400 281 31 0 chr17 60949279 60949375 -34323276 + RSINE1 SINE B4 39 137 -28 6 1050 942 124 7 7 chr17 60949603 60949749 -34322902 + B1_Mm SINE Alu 2 147 0 6 1050 207 0 0 0 chr17 60949751 60949774 -34322877 + (CAA)n Simple_repeat Simple_repeat 2 24 0 6 1050 184 365 40 26 chr17 60949796 60949872 -34322779 - MIRc SINE MIR -158 110 34 6 1050 21 36 0 0 chr17 60950053 60950081 -34322570 + AT_rich Low_complexity Low_complexity 1 28 0 6 1050 1153 103 6 11 chr17 60950297 60950474 -34322177 + B2_Mm2 SINE B2 1 176 -19 6 1050 1039 97 0 7 chr17 60950476 60950622 -34322029 + B1_Mus2 SINE Alu 1 145 -2 6 1050 31 0 0 0 chr17 60950625 60950656 -34321995 + AT_rich Low_complexity Low_complexity 1 31 0 6 1050 275 222 51 8 chr17 60950760 60950878 -34321773 + (TA)n Simple_repeat Simple_repeat 1 123 0 6 1050 7496 76 13 0 chr17 60950910 60952246 -34320405 - L1_Mus1 LINE L1 0 6567 5213 6 1050 1092 307 76 55 chr17 60952495 60953063 -34319588 - Lx8 LINE L1 -560 6913 6334 6 1050 364 348 81 30 chr17 60953281 60953515 -34319136 - L1MEc LINE L1 -5827 573 328 6 1050 22 80 0 0 chr17 60953906 60953956 -34318695 + AT_rich Low_complexity Low_complexity 1 50 0 6 1050 24 53 0 0 chr17 60954014 60954052 -34318599 + AT_rich Low_complexity Low_complexity 1 38 0 6 1050 32 26 0 0 chr17 60954482 60954521 -34318130 + AT_rich Low_complexity Low_complexity 1 39 0 6 1050 567 107 0 0 chr17 60954888 60954972 -34317679 + (TTTTC)n Simple_repeat Simple_repeat 2 85 0 6 1050 1305 322 73 30 chr17 60954987 60955944 -34316707 - Lx6 LINE L1 -368 7092 6097 6 1050 21 0 0 0 chr17 60956073 60956094 -34316557 + AT_rich Low_complexity Low_complexity 1 21 0 6 1050 272 243 0 28 chr17 60956098 60956170 -34316481 + (TATG)n Simple_repeat Simple_repeat 3 72 0 6 1050 242 221 67 34 chr17 60957275 60957364 -34315287 - Lx6 LINE L1 -363 5517 5426 6 1050 337 280 100 27 chr17 60961299 60961409 -34311242 - PB1D9 SINE Alu -2 118 1 6 1050 276 327 9 35 chr17 60961669 60961783 -34310868 - L1M2 LINE L1 -581 5710 5600 6 1050 1078 238 11 23 chr17 60963731 60963993 -34308658 - Lx6 LINE L1 -3 7457 7199 6 1050 297 0 0 0 chr17 60966232 60966265 -34306386 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 6 1050 502 181 9 0 chr17 60966265 60966370 -34306281 - Lx4A LINE L1 0 7058 6953 6 1050 218 269 59 15 chr17 60966400 60966468 -34306183 - B4A SINE B4 -195 97 27 6 1050 1507 84 0 0 chr17 60967072 60967274 -34305377 + L1_Mus1 LINE L1 6366 6567 0 6 1050 1178 52 0 7 chr17 60967398 60967553 -34305098 + (GAAAA)n Simple_repeat Simple_repeat 4 157 0 6 1050 4597 73 35 30 chr17 60967951 60968627 -34304024 - L1_Mm LINE L1 -1998 3885 3206 6 1050 4987 48 3 2 chr17 60968627 60969247 -34303404 + L1Md_F2 LINE L1 5961 6581 -1 6 1050 353 56 56 0 chr17 60969267 60969321 -34303330 + (GAAAA)n Simple_repeat Simple_repeat 3 59 0 6 1050 3608 140 58 121 chr17 60970731 60971594 -34301057 + RMER17D2 LTR ERVK 1 809 0 6 1050 23 0 0 0 chr17 60971610 60971633 -34301018 + AT_rich Low_complexity Low_complexity 1 23 0 6 1050 581 257 105 69 chr17 60972230 60972372 -34300279 - RLTR26 LTR ERVK -207 435 291 6 1050 180 0 0 0 chr17 60972372 60972392 -34300259 + (GGTTG)n Simple_repeat Simple_repeat 4 23 0 6 1050 581 257 105 69 chr17 60972392 60972554 -34300097 - RLTR26 LTR ERVK -352 290 120 6 1050 574 309 71 26 chr17 60972925 60973377 -34299274 + L1M2 LINE L1 4825 5296 -847 6 1050 1845 252 18 36 chr17 60973360 60973919 -34298732 + Lx6 LINE L1 5713 6261 -1199 6 1050 483 48 0 0 chr17 60974300 60974362 -34298289 + (T)n Simple_repeat Simple_repeat 1 62 0 6 1050 11608 27 0 0 chr17 60974380 60976422 -34296229 - L1Md_T LINE L1 0 6582 4541 6 1050 16581 22 0 0 chr17 60976422 60978376 -34294275 + L1Md_T LINE L1 2599 4552 -1331 6 1050 542 299 32 25 chr17 60979610 60979768 -34292883 - MER58A DNA MER1_type -27 197 39 6 1050 207 203 0 0 chr17 60980107 60980171 -34292480 + T-rich Low_complexity Low_complexity 1 64 0 6 1050 693 286 48 71 chr17 60980745 60981137 -34291514 + Lx9 LINE L1 7221 7603 -41 6 1050 307 276 82 45 chr17 60981247 60981357 -34291294 + Lx8 LINE L1 6204 6317 -1156 6 1050 628 39 0 0 chr17 60981440 60981518 -34291133 + B1_Mm SINE Alu 68 145 -2 6 1050 204 67 0 0 chr17 60981873 60981903 -34290748 + (A)n Simple_repeat Simple_repeat 1 30 0 6 1050 2825 52 2 110 chr17 60982419 60982854 -34289797 - RLTR10 LTR ERVK -2 388 1 6 1050 24 77 0 0 chr17 60983172 60983224 -34289427 + AT_rich Low_complexity Low_complexity 1 52 0 6 1050 338 323 67 87 chr17 60983437 60983677 -34288974 + L1M4c LINE L1 1282 1512 -4872 6 1050 1232 118 11 0 chr17 60983677 60983864 -34288787 + B2_Mm1t SINE B2 1 189 -4 7 1050 338 323 67 87 chr17 60983864 60983969 -34288682 + L1M4c LINE L1 1513 1620 -4764 6 1050 22 0 0 0 chr17 60984115 60984137 -34288514 + AT_rich Low_complexity Low_complexity 1 22 0 7 1050 2517 105 150 32 chr17 60984218 60984685 -34287966 + Lx3_Mus LINE L1 5688 6209 -800 7 1050 878 184 6 0 chr17 60984927 60985106 -34287545 + GA-rich Low_complexity Low_complexity 1 180 0 7 1050 513 0 0 0 chr17 60985106 60985163 -34287488 + (GAAA)n Simple_repeat Simple_repeat 1 57 0 7 1050 459 63 0 0 chr17 60986105 60986168 -34286483 + (TG)n Simple_repeat Simple_repeat 2 64 0 7 1050 1316 205 53 37 chr17 60986175 60986610 -34286041 + L1_Mur3 LINE L1 2721 3162 -2718 7 1050 2663 272 38 95 chr17 60986605 60986773 -34285878 + L1_Mur3 LINE L1 4106 4274 -1606 7 1050 426 20 0 0 chr17 60986773 60986824 -34285827 + (CA)n Simple_repeat Simple_repeat 1 51 0 7 1050 2663 272 38 95 chr17 60986824 60987190 -34285461 + L1_Mur3 LINE L1 4275 4628 -1252 7 1050 459 0 0 0 chr17 60987190 60987241 -34285410 + (GA)n Simple_repeat Simple_repeat 2 52 0 7 1050 2663 272 38 95 chr17 60987241 60988295 -34284356 + L1_Mur3 LINE L1 4629 5604 -276 7 1050 2658 195 37 68 chr17 60988305 60988954 -34283697 + Lx2B LINE L1 6370 6998 -2 7 1050 2823 161 39 8 chr17 60989346 60989860 -34282791 - Lx2 LINE L1 0 6997 6468 7 1050 393 188 73 0 chr17 60989923 60990019 -34282632 - Lx6 LINE L1 -11 7449 7347 7 1050 495 246 4 4 chr17 60990918 60991037 -34281614 - B3 SINE B2 -78 120 2 7 1050 362 284 0 0 chr17 60993569 60993657 -34278994 - B3 SINE B2 -1 215 128 7 1050 24 0 0 0 chr17 60994046 60994070 -34278581 + AT_rich Low_complexity Low_complexity 1 24 0 7 1050 439 357 69 17 chr17 60994957 60995131 -34277520 + MER70A LTR ERVL 288 470 -2 7 1050 24 0 0 0 chr17 60995564 60995588 -34277063 + AT_rich Low_complexity Low_complexity 1 24 0 7 1050 306 338 73 45 chr17 60996310 60996530 -34276121 + MT2A LTR ERVL 196 421 -112 7 1050 1167 29 0 0 chr17 60996569 60996708 -34275943 + (TC)n Simple_repeat Simple_repeat 2 140 0 7 1050 402 21 0 0 chr17 60996708 60996754 -34275897 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1050 243 104 28 56 chr17 60996760 60996831 -34275820 + (CAGAGA)n Simple_repeat Simple_repeat 2 70 0 7 1050 260 143 0 0 chr17 60996852 60996894 -34275757 + MLT2C2 LTR ERVL 518 559 0 7 1050 415 273 94 25 chr17 60996923 60997126 -34275525 - L1M5 LINE L1 -396 5768 5552 7 1050 521 197 136 0 chr17 60997497 60997629 -34275022 + RMER6C LTR ERVK 1 150 -540 7 1050 9209 111 28 11 chr17 60997659 60998748 -34273903 - Lx3_Mus LINE L1 0 7009 5909 7 1050 297 0 0 0 chr17 60998748 60998781 -34273870 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 7 1050 9209 109 58 21 chr17 60998781 60999360 -34273291 - Lx3_Mus LINE L1 -1101 5908 5274 7 1050 239 0 32 0 chr17 60999360 60999391 -34273260 + (TTG)n Simple_repeat Simple_repeat 2 33 0 7 1050 180 0 0 0 chr17 60999397 60999417 -34273234 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 7 1050 7021 109 59 22 chr17 60999417 61000000 -34272651 - Lx3_Mus LINE L1 -616 5270 4699 7 1050 5182 71 0 1 chr17 61000028 61000691 -34271960 + L1Md_F2 LINE L1 4925 5586 -297 1 1050 7694 68 3 3 chr17 61000692 61001687 -34270964 + L1Md_F2 LINE L1 5588 6582 0 1 1050 1555 127 8 4 chr17 61001687 61001949 -34270702 - L1_Mur1 LINE L1 -1225 4661 4399 2 1050 353 77 0 0 chr17 61001938 61001990 -34270661 + L1_Mur1 LINE L1 4104 4155 -1731 3 1050 1408 194 25 0 chr17 61001992 61002275 -34270376 + Lx7 LINE L1 3879 4168 -1712 4 1050 7199 71 16 16 chr17 61002271 61003254 -34269397 + L1_Mus3 LINE L1 5654 6636 -2 5 1050 5728 225 77 39 chr17 61003238 61005263 -34267388 + Lx7 LINE L1 4142 6250 -1446 4 1050 641 305 44 9 chr17 61005290 61005518 -34267133 + Lx9 LINE L1 7086 7321 -323 6 1050 281 293 0 25 chr17 61005522 61005641 -34267010 + Lx9 LINE L1 7514 7629 -15 6 1050 531 294 54 0 chr17 61005776 61005980 -34266671 + B3 SINE B2 2 216 0 7 1050 216 297 14 54 chr17 61006405 61006497 -34266154 + B2_Mm1t SINE B2 6 89 -109 8 1050 318 26 0 0 chr17 61006497 61006536 -34266115 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 1050 312 360 26 17 chr17 61006655 61006771 -34265880 + ID_B1 SINE B4 10 126 -98 1 1050 320 307 103 32 chr17 61006827 61007012 -34265639 + B3 SINE B2 1 198 -18 1 1050 180 0 0 0 chr17 61007044 61007064 -34265587 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1 1050 1436 149 44 11 chr17 61007067 61007339 -34265312 + Lx LINE L1 6373 6653 -1 1 1050 1091 82 0 33 chr17 61007344 61007480 -34265171 + B1_Mus2 SINE Alu 1 135 -12 1 1050 387 0 0 0 chr17 61007480 61007523 -34265128 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1 1050 1091 82 0 33 chr17 61007523 61007538 -34265113 + B1_Mus2 SINE Alu 136 147 0 1 1050 248 279 10 97 chr17 61007795 61007898 -34264753 + RMER2 LTR ERV1 330 423 -144 1 1050 3163 50 7 25 chr17 61008003 61008410 -34264241 + MTB LTR MaLR 1 400 0 1 1050 28 29 0 0 chr17 61010025 61010060 -34262591 + AT_rich Low_complexity Low_complexity 1 35 0 1 1050 237 260 54 14 chr17 61010516 61010590 -34262061 + B4 SINE B4 2 78 -214 1 1050 556 357 20 5 chr17 61010650 61010850 -34261801 - Lx7 LINE L1 -544 7152 6950 2 1050 2549 277 27 43 chr17 61010875 61012224 -34260427 - Lx7 LINE L1 -1018 6678 5332 2 1050 2184 41 4 0 chr17 61012234 61012501 -34260150 - L1Md_T LINE L1 0 6582 6315 2 1050 317 82 20 0 chr17 61012779 61012828 -34259823 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1050 3567 155 32 68 chr17 61012863 61013652 -34258999 - RMER12B LTR ERVK -143 1261 502 2 1050 7447 96 14 2 chr17 61013660 61014921 -34257730 - L1_Mus3 LINE L1 -4 6634 5358 2 1050 1136 175 104 19 chr17 61014921 61015191 -34257460 - RMER12B LTR ERVK -889 515 25 2 1050 824 220 111 74 chr17 61015241 61015565 -34257086 - Lx7 LINE L1 -1533 4347 4012 2 1050 30 83 0 0 chr17 61016382 61016454 -34256197 + AT_rich Low_complexity Low_complexity 1 72 0 2 1050 461 62 0 15 chr17 61017269 61017335 -34255316 + (TG)n Simple_repeat Simple_repeat 2 66 0 2 1050 692 108 15 15 chr17 61017722 61017854 -34254797 + (TG)n Simple_repeat Simple_repeat 1 132 0 2 1050 245 343 94 16 chr17 61019123 61019255 -34253396 + MIR SINE MIR 28 172 -104 2 1050 9079 115 120 7 chr17 61020236 61021986 -34250665 - L1_Mus3 LINE L1 -306 6332 4255 2 1050 6247 60 16 2 chr17 61021986 61022783 -34249868 + RLTR13C2 LTR ERVK 1 808 0 3 1050 9079 122 202 7 chr17 61022783 61023158 -34249493 - L1_Mus3 LINE L1 -1629 4254 3880 2 1050 5165 98 72 1 chr17 61023158 61023937 -34248714 + L1_Mus3 LINE L1 5805 6638 0 3 1050 344 138 0 0 chr17 61023939 61023997 -34248654 + L1_Mur3 LINE L1 4464 4521 -1359 3 1050 2391 148 8 5 chr17 61024001 61024402 -34248249 + L1_Mus4 LINE L1 6233 6634 -2 3 1050 35 54 0 0 chr17 61024506 61024562 -34248089 + AT_rich Low_complexity Low_complexity 1 56 0 3 1050 12572 130 25 16 chr17 61024755 61027447 -34245204 + L1VL1 LINE L1 194 2913 -785 3 1050 207 0 0 0 chr17 61027447 61027470 -34245181 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1050 12572 108 11 8 chr17 61027470 61027555 -34245096 + L1VL1 LINE L1 2914 2996 -702 3 1050 1130 78 39 0 chr17 61027557 61027710 -34244941 - L1_Mus4 LINE L1 -473 6163 6005 3 1050 947 88 7 0 chr17 61027866 61028002 -34244649 + B1_Mm SINE Alu 10 146 -1 3 1050 562 245 133 22 chr17 61028975 61029246 -34243405 + L1M3c LINE L1 1213 1513 -4628 3 1050 850 303 92 24 chr17 61029293 61030092 -34242559 + L1M3c LINE L1 3404 4257 -1947 3 1050 638 333 39 0 chr17 61030279 61030483 -34242168 + ID_B1 SINE B4 6 217 -7 4 1050 251 325 12 0 chr17 61030518 61030598 -34242053 + RSINE1 SINE B4 3 83 -82 4 1050 2695 300 29 38 chr17 61030656 61031759 -34240892 - Lx9 LINE L1 -164 7480 6388 4 1050 378 205 8 25 chr17 61031915 61032035 -34240616 + GA-rich Low_complexity Low_complexity 3 120 0 4 1050 392 356 67 38 chr17 61033186 61033396 -34239255 + B3A SINE B2 1 216 0 4 1050 306 0 0 0 chr17 61034482 61034516 -34238135 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1050 392 135 0 13 chr17 61034581 61034656 -34237995 + (TA)n Simple_repeat Simple_repeat 2 75 0 4 1050 6265 57 0 0 chr17 61035443 61036222 -34236429 + L1Md_F2 LINE L1 5804 6582 0 4 1050 276 130 0 0 chr17 61036412 61036458 -34236193 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1050 695 12 12 0 chr17 61036669 61036753 -34235898 + (TAGA)n Simple_repeat Simple_repeat 2 86 0 4 1050 198 103 0 0 chr17 61037018 61037047 -34235604 + (TC)n Simple_repeat Simple_repeat 1 29 0 5 1050 1140 71 0 0 chr17 61037047 61037187 -34235464 - B1_Mus1 SINE Alu -8 140 1 5 1050 24 32 0 0 chr17 61040314 61040345 -34232306 + AT_rich Low_complexity Low_complexity 1 31 0 5 1050 351 302 15 8 chr17 61041668 61041798 -34230853 - MusHAL1 LINE L1 -1669 1043 913 5 1050 448 233 23 15 chr17 61042054 61042185 -34230466 - Lx9 LINE L1 -591 7053 6922 5 1050 858 320 16 0 chr17 61042189 61042445 -34230206 - Lx9 LINE L1 -1028 6616 6357 5 1050 702 87 0 10 chr17 61043737 61043841 -34228810 + L1_Mus2 LINE L1 6462 6564 -2 5 1050 4919 118 7 1 chr17 61043939 61044671 -34227980 + L1_Mus4 LINE L1 5901 6636 0 5 1050 1512 217 94 35 chr17 61044893 61045265 -34227386 - MTB_Mm LTR MaLR -13 394 1 5 1050 3204 195 124 25 chr17 61045265 61046065 -34226586 - MTB_Mm-int LTR MaLR 0 1258 380 5 1050 671 102 9 0 chr17 61046065 61046153 -34226498 + (TTTC)n Simple_repeat Simple_repeat 3 90 0 5 1050 1326 78 0 0 chr17 61046153 61046333 -34226318 + (TC)n Simple_repeat Simple_repeat 1 180 0 5 1050 671 102 9 0 chr17 61046333 61046352 -34226299 + (TTTC)n Simple_repeat Simple_repeat 3 22 0 6 1050 496 150 70 17 chr17 61046381 61046496 -34226155 - L1_Mus4 LINE L1 -6 6630 6510 6 1050 239 94 0 0 chr17 61046496 61046528 -34226123 - L1_Mus4 LINE L1 -425 6211 6180 6 1050 4892 99 0 8 chr17 61046551 61047253 -34225398 - L1_Mus1 LINE L1 -622 5261 4566 6 1050 7447 83 6 2 chr17 61047248 61048557 -34224094 + L1_Mus1 LINE L1 5257 6567 0 6 1050 650 202 189 11 chr17 61048562 61048752 -34223899 + RMER6C LTR ERVK 465 688 -2 6 1050 449 34 17 0 chr17 61049569 61049628 -34223023 + (TG)n Simple_repeat Simple_repeat 2 61 0 6 1050 463 336 0 7 chr17 61049654 61049789 -34222862 - B3 SINE B2 -56 160 27 6 1050 6707 123 18 7 chr17 61049789 61051224 -34221427 - L1_Mus4 LINE L1 0 6636 5200 6 1050 272 170 0 0 chr17 61051223 61051270 -34221381 + L1_Mm LINE L1 4574 4620 -1263 6 1050 1781 190 0 0 chr17 61051296 61051622 -34221029 + L1_Mur2 LINE L1 4889 5214 -663 6 1050 258 388 17 8 chr17 61051990 61052107 -34220544 + B3A SINE B2 1 118 -80 6 1050 548 301 93 21 chr17 61052771 61052964 -34219687 + B3 SINE B2 1 207 -9 7 1050 2754 91 12 10 chr17 61053244 61053644 -34219007 - RLTR13B1 LTR ERVK -492 401 1 7 1050 32 0 0 0 chr17 61054083 61054115 -34218536 + AT_rich Low_complexity Low_complexity 1 32 0 7 1050 234 188 24 48 chr17 61054168 61054252 -34218399 + T-rich Low_complexity Low_complexity 3 84 0 7 1050 560 91 0 11 chr17 61054474 61054563 -34218088 + (TA)n Simple_repeat Simple_repeat 2 89 0 7 1050 218 109 43 0 chr17 61054742 61054788 -34217863 + (TTGTG)n Simple_repeat Simple_repeat 3 50 0 7 1050 767 188 7 27 chr17 61054799 61054947 -34217704 - B1_Mus1 SINE Alu -1 147 3 7 1050 32 57 0 0 chr17 61055036 61055089 -34217562 + AT_rich Low_complexity Low_complexity 1 53 0 7 1050 1131 145 10 0 chr17 61055917 61056078 -34216573 + B2_Mm2 SINE B2 1 161 -34 7 1050 288 77 0 0 chr17 61056078 61056117 -34216534 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 7 1050 1131 145 10 0 chr17 61056117 61056148 -34216503 + B2_Mm2 SINE B2 162 194 -1 7 1050 829 119 11 62 chr17 61056231 61056506 -34216145 + (TAGA)n Simple_repeat Simple_repeat 1 260 0 8 1050 1000 196 195 4 chr17 61060193 61060419 -34212232 + MTC LTR MaLR 119 387 -34 8 1050 289 43 43 0 chr17 61060424 61060471 -34212180 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 8 1050 447 73 0 0 chr17 61060746 61060814 -34211837 + (T)n Simple_repeat Simple_repeat 1 68 0 8 1050 403 351 94 53 chr17 61060996 61061315 -34211336 - MT2A LTR ERVL -201 332 1 8 1050 23 54 0 0 chr17 61061502 61061539 -34211112 + AT_rich Low_complexity Low_complexity 1 37 0 8 1050 28 29 0 0 chr17 61061626 61061661 -34210990 + AT_rich Low_complexity Low_complexity 1 35 0 8 1050 485 373 63 16 chr17 61061775 61062094 -34210557 - LTR86C LTR ERVL -283 338 5 8 1050 261 0 0 0 chr17 61063525 61063554 -34209097 + (TTG)n Simple_repeat Simple_repeat 2 30 0 8 1050 1046 97 0 14 chr17 61063554 61063691 -34208960 - B1_Mus2 SINE Alu -8 139 3 8 1050 714 225 68 62 chr17 61067557 61067802 -34204849 - MTD LTR MaLR -3 416 122 9 1050 809 324 8 28 chr17 61068061 61068262 -34204389 - MTD LTR MaLR -96 323 126 9 1050 2932 71 5 8 chr17 61068262 61068659 -34203992 + MTA_Mm LTR MaLR 1 396 0 9 1050 809 308 103 48 chr17 61068659 61068739 -34203912 - MTD LTR MaLR -294 125 14 9 1050 25 31 0 0 chr17 61068795 61068827 -34203824 + AT_rich Low_complexity Low_complexity 1 32 0 9 1050 432 0 0 0 chr17 61069445 61069493 -34203158 + (TG)n Simple_repeat Simple_repeat 1 48 0 9 1050 395 266 300 22 chr17 61071143 61071420 -34201231 + ORR1D2 LTR MaLR 9 362 -12 9 1050 487 229 139 65 chr17 61071977 61072192 -34200459 + MER34A1 LTR ERV1 301 531 -56 9 1050 339 25 0 0 chr17 61073025 61073065 -34199586 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 1050 298 313 0 66 chr17 61073428 61073534 -34199117 - PB1D7 SINE Alu -7 113 15 9 1050 306 247 52 0 chr17 61073599 61073676 -34198975 - RMER20B LTR ERVK -417 210 130 9 1050 474 314 41 48 chr17 61073837 61073983 -34198668 - RMER20B LTR ERVK -369 147 3 9 1050 28 0 0 0 chr17 61074106 61074134 -34198517 + AT_rich Low_complexity Low_complexity 1 28 0 1 1050 318 362 14 14 chr17 61074161 61074304 -34198347 - RSINE1 SINE B4 -22 143 1 1 1050 2993 59 0 10 chr17 61075879 61076273 -34196378 + L1Md_F2 LINE L1 6193 6582 0 1 1050 797 195 24 0 chr17 61076333 61076497 -34196154 - URR1A DNA MER1_type 0 226 59 1 1050 396 369 81 22 chr17 61077417 61077639 -34195012 + MLT1D LTR MaLR 1 235 -270 1 1050 253 267 175 52 chr17 61077683 61077837 -34194814 + MLT1D LTR MaLR 320 492 -13 1 1050 212 250 0 14 chr17 61078233 61078302 -34194349 + (TTTG)n Simple_repeat Simple_repeat 2 69 0 1 1050 390 42 0 0 chr17 61078363 61078411 -34194240 + (TTA)n Simple_repeat Simple_repeat 3 50 0 1 1050 890 147 35 0 chr17 61078414 61078584 -34194067 - Lx3C LINE L1 -8 6968 6793 1 1050 322 316 95 6 chr17 61078627 61078796 -34193855 + LTR40a LTR ERVL 15 198 -321 1 1050 323 284 23 0 chr17 61079042 61079130 -34193521 + GA-rich Low_complexity Low_complexity 4 93 0 1 1050 225 286 24 12 chr17 61079398 61079483 -34193168 - MLT2B4 LTR ERVL -470 86 1 1 1051 513 343 78 19 chr17 61079982 61080395 -34192256 + L1MEc LINE L1 683 1119 -5281 1 1051 394 312 100 57 chr17 61080901 61081373 -34191278 + L1MD2 LINE L1 5375 5866 -376 1 1051 255 267 132 40 chr17 61081524 61081676 -34190975 + L1MD2 LINE L1 6152 6317 -42 1 1051 23 0 0 0 chr17 61081978 61082001 -34190650 + AT_rich Low_complexity Low_complexity 1 23 0 1 1051 272 48 24 0 chr17 61082066 61082108 -34190543 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 1051 5746 110 17 3 chr17 61082175 61083059 -34189592 - Lx3_Mus LINE L1 -11 6998 6103 1 1051 322 284 80 33 chr17 61083917 61084219 -34188432 + L1MEc LINE L1 2865 3180 -3139 1 1051 1407 310 50 53 chr17 61084598 61085205 -34187446 + Lx8 LINE L1 6775 7387 -86 1 1051 495 0 0 0 chr17 61085205 61085260 -34187391 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 1 1051 1407 310 50 53 chr17 61085260 61085353 -34187298 + Lx8 LINE L1 7388 7473 0 1 1051 23 33 0 0 chr17 61085408 61085438 -34187213 + AT_rich Low_complexity Low_complexity 1 30 0 1 1051 22 70 0 0 chr17 61085461 61085504 -34187147 + AT_rich Low_complexity Low_complexity 1 43 0 1 1051 37 39 0 0 chr17 61085603 61085654 -34186997 + AT_rich Low_complexity Low_complexity 1 51 0 1 1051 21 0 0 0 chr17 61085698 61085719 -34186932 + AT_rich Low_complexity Low_complexity 1 21 0 1 1051 3059 180 25 15 chr17 61086087 61086741 -34185910 + RMER6A LTR ERVK 1 756 0 1 1051 474 241 69 0 chr17 61086812 61086928 -34185723 - ORR1D1 LTR MaLR -250 124 1 1 1051 34 24 0 0 chr17 61086929 61086970 -34185681 + AT_rich Low_complexity Low_complexity 1 41 0 1 1051 372 314 36 60 chr17 61087127 61087293 -34185358 + RSINE1 SINE B4 4 165 0 1 1051 623 262 39 84 chr17 61087756 61087935 -34184716 - B3A SINE B2 -24 171 1 1 1051 258 302 39 23 chr17 61088528 61088657 -34183994 + L1MA10 LINE L1 6180 6310 -24 1 1051 377 266 38 87 chr17 61088781 61088966 -34183685 + RLTR40 LTR ERVK 1 176 -641 1 1051 833 274 64 0 chr17 61088967 61089186 -34183465 - Lx5 LINE L1 -311 6739 6507 1 1051 896 221 106 17 chr17 61089180 61089415 -34183236 + Lx6 LINE L1 7179 7434 -26 1 1051 1681 222 75 70 chr17 61089426 61090036 -34182615 + RLTR40 LTR ERVK 158 770 -47 1 1051 573 28 0 0 chr17 61092595 61092666 -34179985 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 1051 412 289 23 30 chr17 61092680 61092812 -34179839 - RSINE1 SINE B4 -31 134 4 1 1051 40 0 0 0 chr17 61093064 61093104 -34179547 + AT_rich Low_complexity Low_complexity 1 40 0 1 1051 255 204 0 0 chr17 61093734 61093788 -34178863 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 1051 352 214 83 89 chr17 61093886 61094055 -34178596 - RLTR15 LTR ERVK -102 257 90 1 1051 342 291 78 39 chr17 61094073 61094252 -34178399 - RLTR12B LTR ERVK -340 188 3 1 1051 305 59 43 29 chr17 61094308 61094378 -34178273 + (CAAAAA)n Simple_repeat Simple_repeat 2 72 0 1 1051 234 302 95 61 chr17 61095136 61095284 -34177367 - LTR16B LTR ERVL -181 282 130 1 1051 350 333 72 10 chr17 61095708 61095902 -34176749 - Lx8 LINE L1 -155 7318 7113 1 1051 752 341 28 0 chr17 61095914 61096163 -34176488 - B4 SINE B4 -20 272 17 1 1051 315 0 0 0 chr17 61096167 61096202 -34176449 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1 1051 195 69 0 0 chr17 61096218 61096247 -34176404 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1051 1541 254 31 88 chr17 61096792 61097096 -34175555 - MTC LTR MaLR 0 421 121 1 1051 3023 45 0 18 chr17 61097096 61097483 -34175168 + L1Md_F3 LINE L1 6205 6584 0 1 1051 1541 254 31 88 chr17 61097483 61097622 -34175029 - MTC LTR MaLR -301 120 3 1 1051 3106 107 52 8 chr17 61097778 61098156 -34174495 + Lx3_Mus LINE L1 6507 6903 -106 1 1051 5166 129 25 37 chr17 61098156 61099073 -34173578 + RMER17A2 LTR ERVK 1 906 0 1 1051 3106 107 52 8 chr17 61099073 61099175 -34173476 + Lx3_Mus LINE L1 6904 7007 -2 1 1051 1265 186 16 118 chr17 61100009 61100375 -34172276 - ORR1A4 LTR MaLR 0 329 1 1 1051 21 71 0 0 chr17 61100893 61100935 -34171716 + AT_rich Low_complexity Low_complexity 1 42 0 1 1051 4299 17 0 0 chr17 61100986 61101467 -34171184 - LTRIS_Mm LTR ERV1 -1 481 1 1 1051 362 282 125 78 chr17 61101806 61101998 -34170653 + B3 SINE B2 15 215 -1 1 1051 1434 76 10 0 chr17 61103224 61103421 -34169230 + L1_Mus2 LINE L1 6368 6566 0 1 1051 31 0 0 0 chr17 61104098 61104129 -34168522 + AT_rich Low_complexity Low_complexity 1 31 0 1 1051 481 82 47 0 chr17 61105570 61105655 -34166996 - L1Md_F2 LINE L1 0 6582 6494 1 1051 21 0 0 0 chr17 61106399 61106420 -34166231 + AT_rich Low_complexity Low_complexity 1 21 0 1 1051 21 0 0 0 chr17 61106518 61106539 -34166112 + AT_rich Low_complexity Low_complexity 1 21 0 1 1051 291 71 0 0 chr17 61106952 61106994 -34165657 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1051 434 198 117 32 chr17 61107297 61107391 -34165260 + B2_Mm2 SINE B2 18 119 -76 1 1051 6662 69 1 5 chr17 61107575 61108463 -34164188 + L1Md_F2 LINE L1 4701 5585 -298 1 1051 7198 67 27 6 chr17 61108464 61109429 -34163222 + L1Md_F2 LINE L1 5587 6571 -11 1 1051 25 0 0 0 chr17 61112035 61112060 -34160591 + AT_rich Low_complexity Low_complexity 1 25 0 1 1051 273 75 0 0 chr17 61112319 61112359 -34160292 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 1051 393 22 0 0 chr17 61112410 61112456 -34160195 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1051 240 167 0 0 chr17 61113166 61113214 -34159437 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1051 1209 165 52 0 chr17 61113324 61113554 -34159097 + Lx3C LINE L1 6195 6436 -540 1 1051 3365 160 3 0 chr17 61113555 61114124 -34158527 - L1_Mm LINE L1 -879 5004 4434 1 1051 22 56 0 0 chr17 61114127 61114163 -34158488 + AT_rich Low_complexity Low_complexity 1 36 0 1 1051 982 116 7 0 chr17 61114642 61114788 -34157863 + B1_Mus1 SINE Alu 2 148 0 1 1051 1355 341 102 46 chr17 61115112 61116384 -34156267 + Lx8 LINE L1 5608 6951 -522 1 1051 9575 102 17 20 chr17 61116396 61118902 -34153749 - Lx3_Mus LINE L1 -11 6998 4510 1 1051 280 283 85 0 chr17 61118941 61119047 -34153604 + Lx8 LINE L1 6995 7109 -364 1 1051 1458 112 204 73 chr17 61119322 61119611 -34153040 - ORR1A2 LTR MaLR 0 327 1 1 1051 935 319 14 49 chr17 61120526 61120892 -34151759 + MTE2a LTR MaLR 18 370 -9 1 1051 265 278 0 0 chr17 61120892 61120946 -34151705 - ID4_ SINE ID -6 77 24 1 1051 245 226 286 0 chr17 61121091 61121175 -34151476 - B1_Mur1 SINE Alu 0 149 42 1 1051 1644 206 23 49 chr17 61121175 61121257 -34151394 - ORR1C2 LTR MaLR 0 384 303 1 1051 2928 60 47 0 chr17 61121257 61121639 -34151012 + MTB LTR MaLR 1 400 0 1 1051 1644 206 23 49 chr17 61121639 61121944 -34150707 - ORR1C2 LTR MaLR -82 302 7 1 1051 773 330 91 44 chr17 61122059 61122443 -34150208 - MTD LTR MaLR -14 405 4 1 1051 22 0 0 0 chr17 61122842 61122864 -34149787 + AT_rich Low_complexity Low_complexity 1 22 0 1 1051 361 288 91 40 chr17 61123420 61123619 -34149032 + B3 SINE B2 2 210 -6 1 1051 486 46 0 0 chr17 61123886 61123951 -34148700 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 1051 291 28 0 0 chr17 61124214 61124250 -34148401 + (CAA)n Simple_repeat Simple_repeat 2 37 0 1 1051 476 122 0 0 chr17 61124258 61124332 -34148319 + B1_Mur3 SINE Alu 76 149 0 1 1051 261 0 0 0 chr17 61124522 61124551 -34148100 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1051 225 209 43 29 chr17 61124745 61124814 -34147837 + CT-rich Low_complexity Low_complexity 4 73 0 1 1051 490 287 0 45 chr17 61124882 61125039 -34147612 - Lx7 LINE L1 -1167 6529 6380 1 1051 427 317 118 38 chr17 61125066 61125381 -34147270 + Lx8 LINE L1 7114 7453 -20 1 1051 29 70 0 0 chr17 61125402 61125459 -34147192 + AT_rich Low_complexity Low_complexity 1 57 0 1 1051 23 92 0 0 chr17 61125738 61125803 -34146848 + AT_rich Low_complexity Low_complexity 1 65 0 1 1051 389 113 28 0 chr17 61125884 61125955 -34146696 + L1Md_F2 LINE L1 6498 6570 -12 1 1051 28 71 0 0 chr17 61125997 61126053 -34146598 + AT_rich Low_complexity Low_complexity 1 56 0 1 1051 1179 206 195 22 chr17 61127273 61127586 -34145065 - ORR1B2 LTR MaLR 0 367 1 1 1051 2267 70 3 3 chr17 61129021 61129320 -34143331 - L1_Mus1 LINE L1 -3 6564 6266 1 1051 3737 58 2 0 chr17 61129320 61129789 -34142862 + L1_Mus1 LINE L1 5780 6249 -318 1 1051 251 361 0 0 chr17 61130184 61130267 -34142384 + GA-rich Low_complexity Low_complexity 2 84 0 1 1051 485 104 13 0 chr17 61130478 61130555 -34142096 + (TC)n Simple_repeat Simple_repeat 2 79 0 1 1051 1095 79 0 0 chr17 61130560 61130700 -34141951 - B1_Mm SINE Alu -5 142 3 1 1051 285 301 24 0 chr17 61130703 61130786 -34141865 - MER58C DNA MER1_type -88 127 43 1 1051 1991 256 70 99 chr17 61130906 61131675 -34140976 + ORR1D-int LTR MaLR 520 1581 -154 1 1051 10953 124 28 4 chr17 61131679 61134135 -34138516 + L1_Mus1 LINE L1 404 2919 -2964 1 1051 7555 93 45 40 chr17 61134130 61134374 -34138277 + L1_Mus1 LINE L1 4592 4848 -1719 1 1051 228 294 31 52 chr17 61134374 61134471 -34138180 - RMER20A LTR ERVK -236 280 186 1 1051 7555 93 45 40 chr17 61134471 61136095 -34136556 + L1_Mus1 LINE L1 4849 6566 -1 1 1051 3001 84 5 16 chr17 61136187 61136621 -34136030 + L1_Mus3 LINE L1 6208 6636 -2 1 1051 180 0 0 0 chr17 61136695 61136715 -34135936 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1 1051 190 0 67 0 chr17 61136945 61136975 -34135676 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 1051 996 100 0 0 chr17 61136980 61137120 -34135531 - B1_Mm SINE Alu -5 142 3 2 1051 1679 33 0 14 chr17 61139007 61139222 -34133429 - L1Md_F2 LINE L1 0 6582 6371 2 1051 429 356 17 21 chr17 61140463 61140704 -34131947 - Lx9 LINE L1 -190 7454 7215 2 1051 308 208 0 250 chr17 61140813 61140993 -34131658 - RLTR21 LTR ERVK 0 1572 1438 2 1051 387 0 0 0 chr17 61141011 61141054 -34131597 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1051 356 163 12 0 chr17 61141056 61141142 -34131509 + GA-rich Low_complexity Low_complexity 1 87 0 2 1051 5157 206 41 10 chr17 61141167 61142282 -34130369 - RMER12B LTR ERVK -252 1152 3 2 1051 513 267 12 29 chr17 61142346 61142516 -34130135 - Lx9 LINE L1 -594 7050 6884 2 1051 262 206 88 0 chr17 61142517 61142585 -34130066 - Lx9 LINE L1 -920 6724 6651 2 1051 450 328 62 29 chr17 61142583 61142793 -34129858 - Lx8 LINE L1 -998 6475 6259 2 1051 3738 124 37 0 chr17 61142802 61143375 -34129276 - MT2B LTR ERVL -7 594 1 2 1051 273 304 32 63 chr17 61143656 61143814 -34128837 - Lx9 LINE L1 -1634 6010 5858 2 1051 440 290 63 21 chr17 61144424 61144614 -34128037 - MER2 DNA MER2_type -26 319 122 2 1051 255 294 23 23 chr17 61145193 61145280 -34127371 + ORR1D1 LTR MaLR 15 101 -277 2 1051 1184 70 0 6 chr17 61145280 61145439 -34127212 - L1Md_F3 LINE L1 -422 6162 6005 2 1051 3414 57 0 7 chr17 61145439 61145882 -34126769 + L1Md_F3 LINE L1 6144 6583 -1 2 1051 603 297 39 44 chr17 61145895 61146124 -34126527 + ORR1D1 LTR MaLR 111 338 -36 2 1051 1345 124 23 5 chr17 61146969 61147188 -34125463 - L1Md_F2 LINE L1 0 6582 6360 2 1051 23 0 0 0 chr17 61147907 61147930 -34124721 + AT_rich Low_complexity Low_complexity 1 23 0 2 1051 209 116 0 65 chr17 61149815 61149861 -34122790 + T-rich Low_complexity Low_complexity 5 47 0 2 1051 450 0 0 0 chr17 61150003 61150053 -34122598 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 1051 2402 110 73 3 chr17 61151364 61151748 -34120903 + IAPLTR2a LTR ERVK 1 411 0 2 1051 331 106 35 12 chr17 61151750 61151835 -34120816 + IAPEz-int LTR ERVK 3 81 -1906 2 1051 3541 99 24 48 chr17 61151833 61152813 -34119838 + IAPEz-int LTR ERVK 10 662 -5819 2 1051 2507 88 3 3 chr17 61152813 61153155 -34119496 + IAPEz-int LTR ERVK 1359 1700 -4781 2 1051 6807 38 10 6 chr17 61153148 61153974 -34118677 + IAPEz-int LTR ERVK 5651 6479 -2 2 1051 2402 110 73 3 chr17 61153976 61154360 -34118291 + IAPLTR2a LTR ERVK 1 411 0 2 1051 46 33 0 0 chr17 61154380 61154440 -34118211 + AT_rich Low_complexity Low_complexity 1 60 0 2 1051 716 349 80 9 chr17 61154527 61154854 -34117797 - ORR1E LTR MaLR -4 355 6 2 1051 315 364 0 0 chr17 61155016 61155104 -34117547 + B3 SINE B2 1 88 -128 2 1051 1538 114 44 28 chr17 61155420 61155672 -34116979 - ORR1A2 LTR MaLR -68 259 4 2 1051 188 35 35 0 chr17 61155809 61155838 -34116813 + (TAAAAA)n Simple_repeat Simple_repeat 3 32 0 2 1051 677 308 5 39 chr17 61156841 61157047 -34115604 - B3 SINE B2 -6 210 12 2 1051 197 159 0 22 chr17 61157080 61157125 -34115526 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 2 1051 280 382 19 69 chr17 61159082 61159242 -34113409 + B4A SINE B4 24 175 -117 2 1051 237 135 0 0 chr17 61159337 61159389 -34113262 + (TC)n Simple_repeat Simple_repeat 2 53 0 2 1051 297 0 0 0 chr17 61159391 61159424 -34113227 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1051 198 0 0 0 chr17 61159668 61159690 -34112961 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2 1051 2304 79 3 57 chr17 61159814 61160165 -34112486 + IAPLTR1a_Mm LTR ERVK 1 332 -5 2 1051 56256 17 13 5 chr17 61160165 61166590 -34106061 + IAPEz-int LTR ERVK 6 6481 0 2 1051 2278 82 3 57 chr17 61166590 61166941 -34105710 + IAPLTR1a_Mm LTR ERVK 1 332 -5 2 1051 698 228 0 20 chr17 61166961 61167109 -34105542 - B1_Mus1 SINE Alu 0 148 4 2 1051 357 125 0 0 chr17 61167210 61167266 -34105385 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1051 927 27 0 0 chr17 61167266 61167376 -34105275 + (CTTTG)n Simple_repeat Simple_repeat 3 112 0 2 1051 516 355 50 32 chr17 61169643 61169861 -34102790 + B4A SINE B4 4 225 -67 2 1051 470 46 0 15 chr17 61169861 61169927 -34102724 + (CA)n Simple_repeat Simple_repeat 2 66 0 2 1051 5725 96 25 1 chr17 61171160 61171975 -34100676 - L1_Mus3 LINE L1 -1 6637 5804 2 1051 3538 121 11 15 chr17 61171975 61172522 -34100129 + L1_Mus3 LINE L1 5249 5793 -90 2 1051 186 103 0 0 chr17 61172869 61172898 -34099753 + (A)n Simple_repeat Simple_repeat 1 29 0 2 1051 21 0 0 0 chr17 61173995 61174016 -34098635 + AT_rich Low_complexity Low_complexity 1 21 0 2 1051 23 0 0 0 chr17 61174189 61174212 -34098439 + AT_rich Low_complexity Low_complexity 1 23 0 2 1051 40 59 0 0 chr17 61174623 61174691 -34097960 + AT_rich Low_complexity Low_complexity 1 68 0 2 1051 441 0 0 0 chr17 61174763 61174812 -34097839 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1051 1150 217 80 74 chr17 61175193 61175532 -34097119 + ORR1B2 LTR MaLR 1 341 -26 2 1051 256 264 139 0 chr17 61176171 61176243 -34096408 - RSINE1 SINE B4 -7 158 77 2 1051 297 320 111 30 chr17 61176835 61177080 -34095571 - L1M4 LINE L1 -439 5739 5479 2 1051 279 0 0 0 chr17 61179283 61179314 -34093337 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1051 180 0 0 0 chr17 61179945 61179965 -34092686 + (TGGGGG)n Simple_repeat Simple_repeat 2 21 0 2 1051 24 0 0 0 chr17 61180861 61180885 -34091766 + AT_rich Low_complexity Low_complexity 1 24 0 2 1051 432 0 0 0 chr17 61181522 61181570 -34091081 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1051 1936 175 258 59 chr17 61182098 61182823 -34089828 - RMER6C LTR ERVK -4 716 2 2 1051 3262 111 22 12 chr17 61182823 61183323 -34089328 + Lx3_Mus LINE L1 6505 7009 0 2 1051 278 266 43 101 chr17 61183474 61183683 -34088968 - L1M2 LINE L1 -2324 3816 3620 2 1051 821 339 66 85 chr17 61183697 61184816 -34087835 - L1M2 LINE L1 -2535 3608 2511 2 1051 446 250 66 73 chr17 61184960 61185111 -34087540 - RMER6D LTR ERVK -58 662 513 2 1051 4826 60 10 0 chr17 61185227 61185831 -34086820 + L1Md_F2 LINE L1 5952 6561 -21 2 1051 523 0 30 0 chr17 61185831 61185898 -34086753 + (TA)n Simple_repeat Simple_repeat 1 69 0 2 1051 1046 117 0 12 chr17 61185937 61186110 -34086541 + L1Md_F2 LINE L1 6410 6580 -2 2 1051 203 290 0 16 chr17 61186471 61186534 -34086117 + T-rich Low_complexity Low_complexity 3 64 0 2 1051 228 365 80 0 chr17 61187004 61187141 -34085510 - Lx8 LINE L1 -414 7059 6912 2 1051 869 300 36 3 chr17 61187730 61188061 -34084590 - ERVL-int LTR ERVL -373 5388 5047 2 1051 521 346 43 14 chr17 61188100 61188381 -34084270 - ERVL-int LTR ERVL -1039 4675 4387 2 1051 432 0 0 0 chr17 61188502 61188550 -34084101 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1051 268 316 0 0 chr17 61188551 61188627 -34084024 - ERVL-int LTR ERVL -1434 4327 4252 2 1051 1515 259 9 17 chr17 61188628 61189049 -34083602 - MTD LTR MaLR -1 418 1 2 1051 469 314 12 17 chr17 61189049 61189221 -34083430 + MERVL_2A-int LTR ERVL 3923 4093 -1668 2 1051 294 382 24 16 chr17 61189237 61189362 -34083289 - MTE2b LTR MaLR -87 292 167 2 1051 528 126 0 0 chr17 61189434 61189521 -34083130 + (GA)n Simple_repeat Simple_repeat 1 87 0 2 1051 464 321 0 34 chr17 61189599 61189752 -34082899 - MTE2b LTR MaLR -210 169 26 2 1051 1791 311 58 7 chr17 61189775 61190501 -34082150 - ERVL-int LTR ERVL -1658 4099 3337 2 1051 353 338 108 14 chr17 61190878 61191166 -34081485 + MER57F LTR ERV1 85 399 -37 2 1051 300 339 148 31 chr17 61191371 61191791 -34080860 - MLT1H-int LTR MaLR -898 511 43 2 1051 1031 222 117 0 chr17 61192294 61192542 -34080109 + MTC LTR MaLR 3 279 -142 2 1051 364 325 21 20 chr17 61192679 61192881 -34079770 + MTEa LTR MaLR 103 328 -51 2 1051 507 290 57 13 chr17 61192938 61193095 -34079556 - MTD LTR MaLR -15 404 241 2 1051 324 280 58 21 chr17 61193105 61193356 -34079295 - ORR1D2 LTR MaLR -30 340 9 2 1051 967 270 143 68 chr17 61193360 61194183 -34078468 - ORR1D2-int LTR MaLR 0 1370 131 2 1051 755 116 64 13 chr17 61194200 61194357 -34078294 + L1_Mus4 LINE L1 6471 6635 -1 2 1051 182 143 20 0 chr17 61194425 61194474 -34078177 + T-rich Low_complexity Low_complexity 4 53 0 2 1051 491 304 55 6 chr17 61194474 61194656 -34077995 - ORR1D2 LTR MaLR -12 358 168 2 1051 231 177 0 0 chr17 61194664 61194720 -34077931 + BC1_Mm scRNA scRNA 10 65 -18 2 1051 232 271 0 17 chr17 61196137 61196197 -34076454 + RLTR23 LTR ERV1 42 100 -330 2 1051 696 302 43 46 chr17 61196293 61196616 -34076035 + RLTR23 LTR ERV1 109 430 0 2 1051 24 67 0 0 chr17 61196770 61196815 -34075836 + AT_rich Low_complexity Low_complexity 1 45 0 2 1051 23 33 0 0 chr17 61197947 61197977 -34074674 + AT_rich Low_complexity Low_complexity 1 30 0 2 1051 291 311 89 24 chr17 61198476 61198644 -34074007 + B3A SINE B2 4 182 -16 2 1051 294 39 0 73 chr17 61199280 61199335 -34073316 - L1_Mus2 LINE L1 -1 6565 6522 2 1051 21 36 0 0 chr17 61199469 61199497 -34073154 + AT_rich Low_complexity Low_complexity 1 28 0 2 1051 27 0 0 0 chr17 61199634 61199661 -34072990 + AT_rich Low_complexity Low_complexity 1 27 0 2 1051 468 254 199 22 chr17 61199770 61199951 -34072700 + B3 SINE B2 4 216 0 2 1051 2493 194 28 35 chr17 61200019 61200584 -34072067 - RMER6A LTR ERVK -3 753 193 2 1051 639 120 0 0 chr17 61200584 61200701 -34071950 + (TTTC)n Simple_repeat Simple_repeat 2 118 0 2 1051 474 87 138 16 chr17 61200701 61200824 -34071827 - RMER6A LTR ERVK -499 191 1 2 1051 513 0 0 0 chr17 61200996 61201053 -34071598 + (TA)n Simple_repeat Simple_repeat 1 57 0 2 1051 220 314 65 56 chr17 61201260 61201368 -34071283 - PB1D7 SINE Alu -1 119 11 2 1051 2214 263 57 108 chr17 61201603 61202332 -34070319 - L1_Mur3 LINE L1 -1604 4276 3651 2 1051 348 24 0 0 chr17 61202332 61202373 -34070278 + (TTTTA)n Simple_repeat Simple_repeat 2 42 0 2 1051 2214 263 57 108 chr17 61202373 61203107 -34069544 - L1_Mur3 LINE L1 -2230 3650 2906 2 1051 630 60 0 0 chr17 61203107 61203190 -34069461 + (TA)n Simple_repeat Simple_repeat 2 84 0 2 1051 2214 263 57 108 chr17 61203190 61203281 -34069370 - L1_Mur3 LINE L1 -2975 2905 2801 2 1051 30 27 0 0 chr17 61203521 61203558 -34069093 + AT_rich Low_complexity Low_complexity 1 37 0 2 1051 2345 79 0 3 chr17 61203746 61204064 -34068587 + L1_Mus1 LINE L1 6251 6567 0 2 1051 3261 299 77 6 chr17 61204108 61205126 -34067525 + Lx6 LINE L1 6078 7167 -293 2 1051 387 299 34 30 chr17 61205496 61205695 -34066956 - B1_Mm SINE Alu -2 148 2 2 1051 316 188 0 30 chr17 61205695 61205758 -34066893 - HY3 scRNA scRNA -40 61 1 2 1051 678 143 11 22 chr17 61207870 61208049 -34064602 + (TA)n Simple_repeat Simple_repeat 1 177 0 2 1051 473 274 52 58 chr17 61208321 61208476 -34064175 + RSINE1 SINE B4 9 162 -3 2 1051 279 93 0 0 chr17 61208893 61208936 -34063715 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1051 3294 142 24 48 chr17 61209697 61209801 -34062850 + Lx3B LINE L1 5316 5429 -457 2 1051 2964 69 8 13 chr17 61209801 61210199 -34062452 - MTA_Mm LTR MaLR 0 396 1 2 1051 5596 142 24 48 chr17 61210199 61210615 -34062036 + Lx3B LINE L1 5430 5842 -44 2 131 1075 106 0 0 chr17 61210615 61210757 -34061894 + B1_Mus1 SINE Alu 1 142 -6 2 1052 5596 171 107 23 chr17 61210757 61211084 -34061567 + Lx3B LINE L1 5840 6160 -813 2 1052 468 0 0 0 chr17 61211084 61211136 -34061515 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 1052 5596 171 107 23 chr17 61211136 61211713 -34060938 + Lx3B LINE L1 6161 6841 -132 2 1052 2689 31 3 60 chr17 61211861 61212208 -34060443 + IAPLTR2b LTR ERVK 1 327 0 2 1052 335 291 59 66 chr17 61213160 61213296 -34059355 + Lx9 LINE L1 7285 7419 -225 3 1052 30 45 0 0 chr17 61213857 61213901 -34058750 + AT_rich Low_complexity Low_complexity 1 44 0 3 1052 618 257 36 26 chr17 61214586 61214755 -34057896 + B3A SINE B2 1 172 -26 3 1052 453 76 0 0 chr17 61214755 61214821 -34057830 + (CA)n Simple_repeat Simple_repeat 2 67 0 3 1052 618 257 36 26 chr17 61214821 61214843 -34057808 + B3A SINE B2 173 194 -4 3 1052 21 89 0 0 chr17 61214874 61214930 -34057721 + AT_rich Low_complexity Low_complexity 1 56 0 3 1052 2630 104 43 18 chr17 61214954 61215347 -34057304 + MTB_Mm LTR MaLR 1 403 -4 3 1052 1066 80 25 6 chr17 61215347 61215510 -34057141 + L1_Mus2 LINE L1 6401 6566 0 3 1052 649 331 80 29 chr17 61215715 61215868 -34056783 - Lx8 LINE L1 -707 6766 6615 3 1052 1971 130 63 33 chr17 61215868 61216202 -34056449 + Lx LINE L1 6304 6647 -7 3 1052 649 331 80 29 chr17 61216202 61216524 -34056127 - Lx8 LINE L1 -859 6614 6268 3 1052 570 151 0 0 chr17 61216534 61216640 -34056011 + (TG)n Simple_repeat Simple_repeat 1 106 0 3 1052 260 148 19 0 chr17 61216942 61216996 -34055655 - Lx4A LINE L1 0 7058 7004 3 1052 397 0 0 36 chr17 61217327 61217382 -34055269 + (TTA)n Simple_repeat Simple_repeat 1 53 0 3 1052 262 191 0 0 chr17 61217386 61217433 -34055218 - Lx3B LINE L1 -3 6970 6924 3 1052 2986 93 7 2 chr17 61217776 61218205 -34054446 + L1_Mus3 LINE L1 6202 6632 -6 3 1052 207 0 0 0 chr17 61218500 61218523 -34054128 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 3 1052 659 87 10 0 chr17 61218982 61219086 -34053565 + (CA)n Simple_repeat Simple_repeat 1 105 0 3 1052 1306 99 15 0 chr17 61219432 61219633 -34053018 + L1_Mus3 LINE L1 6432 6635 -3 3 1052 34 24 0 0 chr17 61219649 61219690 -34052961 + AT_rich Low_complexity Low_complexity 1 41 0 3 1052 1065 103 0 0 chr17 61219731 61219877 -34052774 + B1_Mus2 SINE Alu 1 146 -1 3 1052 318 26 0 0 chr17 61220188 61220227 -34052424 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1052 309 82 0 0 chr17 61220227 61220276 -34052375 + (GA)n Simple_repeat Simple_repeat 1 49 0 3 1052 4324 113 14 1 chr17 61221031 61221677 -34050974 - L1_Mus4 LINE L1 0 6636 5983 3 1052 624 27 0 0 chr17 61222831 61222905 -34049746 + (TTCC)n Simple_repeat Simple_repeat 4 77 0 3 1052 37874 30 0 0 chr17 61223711 61230345 -34042306 - L1Md_T LINE L1 0 6585 1 3 1052 2786 223 77 18 chr17 61230744 61231607 -34041044 + Lx5 LINE L1 6070 7050 0 3 1052 22 35 0 0 chr17 61231746 61231775 -34040876 + AT_rich Low_complexity Low_complexity 1 29 0 3 1052 30 0 0 0 chr17 61232448 61232478 -34040173 + AT_rich Low_complexity Low_complexity 1 30 0 3 1052 507 237 189 7 chr17 61232479 61232632 -34040019 - Lx3B LINE L1 -3 6970 6790 3 1052 277 261 57 6 chr17 61232931 61233108 -34039543 - RMER17D LTR ERVK -372 517 332 3 1052 306 0 0 0 chr17 61233329 61233363 -34039288 + (T)n Simple_repeat Simple_repeat 1 34 0 3 1052 28 48 0 0 chr17 61234473 61234515 -34038136 + AT_rich Low_complexity Low_complexity 1 42 0 3 1052 33 85 0 0 chr17 61234627 61234709 -34037942 + AT_rich Low_complexity Low_complexity 1 82 0 3 1052 260 275 66 30 chr17 61234864 61235051 -34037600 + L1M5 LINE L1 5546 5739 -425 3 1052 26 74 0 0 chr17 61235628 61235682 -34036969 + AT_rich Low_complexity Low_complexity 1 54 0 3 1052 6749 141 4 5 chr17 61236383 61237608 -34035043 + Lx2 LINE L1 5423 6642 -355 3 1052 1467 132 0 0 chr17 61237608 61237828 -34034823 + Lx2 LINE L1 6777 6996 -1 3 1052 648 337 23 0 chr17 61237828 61237863 -34034788 + Lx2 LINE L1 6304 6343 -241 3 1052 28 0 0 0 chr17 61238680 61238708 -34033943 + AT_rich Low_complexity Low_complexity 1 28 0 3 1052 215 389 25 82 chr17 61239174 61239370 -34033281 - B4A SINE B4 -18 274 90 3 1052 318 302 28 107 chr17 61240572 61240694 -34031957 - RMER17C LTR ERVK -61 349 241 3 1052 369 0 0 0 chr17 61240694 61240735 -34031916 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1052 318 302 28 107 chr17 61240735 61240790 -34031861 - RMER17C LTR ERVK -170 240 186 3 1052 662 0 0 13 chr17 61240796 61240875 -34031776 + (GAGAA)n Simple_repeat Simple_repeat 5 82 0 3 1052 525 32 0 0 chr17 61240883 61240946 -34031705 + (GGA)n Simple_repeat Simple_repeat 1 63 0 3 1052 987 108 0 76 chr17 61241193 61241364 -34031287 + B2_Mm2 SINE B2 3 160 -35 3 1052 405 0 0 0 chr17 61241365 61241410 -34031241 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 3 1052 701 191 32 0 chr17 61241426 61241552 -34031099 + B1_Mus2 SINE Alu 14 143 -4 3 1052 645 49 0 0 chr17 61241552 61241633 -34031018 + (GAAA)n Simple_repeat Simple_repeat 3 83 0 3 1052 203 150 32 48 chr17 61242257 61242320 -34030331 + (CAAA)n Simple_repeat Simple_repeat 3 64 0 3 1052 978 273 100 108 chr17 61242352 61242619 -34030032 - Lx7 LINE L1 -284 7412 7167 3 1052 1748 102 4 0 chr17 61242619 61242863 -34029788 + L1_Mus1 LINE L1 6323 6567 0 3 1052 978 273 100 108 chr17 61242863 61243084 -34029567 - Lx7 LINE L1 -530 7166 6929 3 1052 23 0 0 0 chr17 61245378 61245401 -34027250 + AT_rich Low_complexity Low_complexity 1 23 0 3 1052 8810 107 21 5 chr17 61245402 61246890 -34025761 - Lx3_Mus LINE L1 -1 7008 5497 3 1052 3148 83 50 4 chr17 61246888 61247348 -34025303 + L1_Mur1 LINE L1 4622 5102 -784 3 1052 280 286 124 67 chr17 61247756 61247861 -34024790 + B4A SINE B4 12 122 -170 3 1052 697 71 0 17 chr17 61248006 61248121 -34024530 + (CA)n Simple_repeat Simple_repeat 2 114 0 3 1052 2351 152 10 10 chr17 61248445 61248832 -34023819 - ORR1B1 LTR MaLR 0 394 8 3 1052 540 261 48 21 chr17 61248874 61249019 -34023632 + MTC LTR MaLR 273 421 0 3 1052 3356 279 26 86 chr17 61249031 61250300 -34022351 + MTC-int LTR MaLR 55 1247 -11 3 1052 589 289 72 5 chr17 61250302 61250497 -34022154 + MTD LTR MaLR 159 366 -53 3 1052 438 168 55 27 chr17 61251235 61251345 -34021306 + Lx9 LINE L1 7531 7643 -1 3 1052 353 44 14 42 chr17 61251978 61252049 -34020602 + (CAAAA)n Simple_repeat Simple_repeat 2 70 0 3 1052 3474 160 7 2 chr17 61252607 61253213 -34019438 - Lx2 LINE L1 -349 6648 6040 3 1052 804 119 32 0 chr17 61253208 61253334 -34019317 + Lx2 LINE L1 5904 6033 -964 3 1052 423 0 0 0 chr17 61253730 61253777 -34018874 + (TC)n Simple_repeat Simple_repeat 1 47 0 3 1052 405 0 0 0 chr17 61253777 61253821 -34018830 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 1052 2551 190 34 15 chr17 61254910 61255435 -34017216 + RMER1B Other Other 529 1063 -3 3 1052 21 36 0 0 chr17 61255599 61255627 -34017024 + AT_rich Low_complexity Low_complexity 1 28 0 3 1052 947 199 33 0 chr17 61255835 61256046 -34016605 + Lx2B LINE L1 6778 6995 -5 3 1052 226 362 109 8 chr17 61257199 61257222 -34015429 + ID_B1 SINE B4 75 184 -40 3 1052 276 307 34 0 chr17 61257222 61257310 -34015341 + B1F SINE Alu 16 106 -43 3 1052 2099 91 229 3 chr17 61257310 61257642 -34015009 + MTB_Mm LTR MaLR 1 407 0 3 1052 226 362 109 8 chr17 61257642 61257658 -34014993 + ID_B1 SINE B4 185 214 -10 3 1052 228 211 41 31 chr17 61257677 61257775 -34014876 + Lx9 LINE L1 7419 7517 -127 3 1052 205 138 0 0 chr17 61259112 61259141 -34013510 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 1052 22 0 0 0 chr17 61259317 61259339 -34013312 + AT_rich Low_complexity Low_complexity 1 22 0 3 1052 21 36 0 0 chr17 61259488 61259516 -34013135 + AT_rich Low_complexity Low_complexity 1 28 0 3 1052 186 43 0 0 chr17 61259694 61259717 -34012934 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 3 1052 26 0 0 0 chr17 61259717 61259743 -34012908 + AT_rich Low_complexity Low_complexity 1 26 0 3 1052 4391 62 2 3 chr17 61259750 61260316 -34012335 - L1Md_F2 LINE L1 -13 6569 6005 3 1052 8224 43 0 0 chr17 61260316 61261845 -34010806 - L1Md_T LINE L1 -1 6581 5053 3 1052 27 0 0 0 chr17 61261950 61261977 -34010674 + AT_rich Low_complexity Low_complexity 1 27 0 3 1052 286 244 139 0 chr17 61263217 61263303 -34009348 - L1MA5 LINE L1 -31 6269 6172 3 1052 303 246 78 17 chr17 61263376 61263492 -34009159 - L1MA6 LINE L1 -119 6181 6059 3 1052 4720 221 50 57 chr17 61263714 61265004 -34007647 - Lx2B LINE L1 -5 6995 5716 3 1052 911 143 6 56 chr17 61265006 61265184 -34007467 + L1_Mur2 LINE L1 4583 4751 -1126 3 1052 320 200 0 89 chr17 61265242 61265329 -34007322 + L1_Mur2 LINE L1 4755 4843 -1043 3 1052 640 230 0 15 chr17 61265388 61265525 -34007126 - B1_Mur4 SINE Alu -7 143 9 3 1052 502 309 44 44 chr17 61265563 61265746 -34006905 - B3A SINE B2 -15 183 1 3 1052 22 0 0 0 chr17 61266509 61266531 -34006120 + AT_rich Low_complexity Low_complexity 1 22 0 3 1052 2061 150 52 45 chr17 61268491 61268917 -34003734 - Lx3B LINE L1 -4 6969 6541 3 1052 44 20 0 0 chr17 61268936 61268987 -34003664 + AT_rich Low_complexity Low_complexity 1 51 0 3 1052 1165 41 0 0 chr17 61269616 61269763 -34002888 - L1Md_A LINE L1 -1 6581 6435 3 1052 186 310 47 12 chr17 61270127 61270212 -34002439 - MIRc SINE MIR -108 160 73 3 1052 3226 193 25 77 chr17 61270262 61271013 -34001638 - RMER6D LTR ERVK -8 712 1 3 1052 180 0 0 0 chr17 61271597 61271617 -34001034 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 3 1052 258 164 0 0 chr17 61271678 61271733 -34000918 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1052 34 24 0 0 chr17 61271811 61271852 -34000799 + AT_rich Low_complexity Low_complexity 1 41 0 3 1052 276 100 0 0 chr17 61272026 61272066 -34000585 + (T)n Simple_repeat Simple_repeat 1 40 0 3 1052 317 303 20 27 chr17 61272578 61272724 -33999927 - RLTR42-int LTR ERVK -4117 1405 1261 3 1052 2706 165 22 168 chr17 61272873 61273586 -33999065 - RMER19C LTR ERVK 0 611 3 3 1052 25 31 0 0 chr17 61275168 61275200 -33997451 + AT_rich Low_complexity Low_complexity 1 32 0 3 1052 1005 203 119 10 chr17 61275248 61275542 -33997109 - Lx9 LINE L1 0 7644 7319 3 1052 692 264 12 6 chr17 61275544 61275712 -33996939 - Lx9 LINE L1 -1058 6586 6418 3 1052 435 19 0 0 chr17 61276677 61276729 -33995922 + (T)n Simple_repeat Simple_repeat 1 52 0 3 1052 213 139 0 0 chr17 61277354 61277397 -33995254 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1052 351 172 21 11 chr17 61278271 61278314 -33994337 + polypyrimidine Low_complexity Low_complexity 53 95 0 4 1052 1179 117 0 0 chr17 61278314 61278494 -33994157 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 4 1052 351 172 21 11 chr17 61278494 61278544 -33994107 + polypyrimidine Low_complexity Low_complexity 2 52 0 4 1052 362 304 161 45 chr17 61278638 61278793 -33993858 - ID_B1 SINE B4 -47 177 5 4 1052 2332 169 9 35 chr17 61279443 61279898 -33992753 + Lx2 LINE L1 6555 6997 0 4 1052 24 53 0 0 chr17 61280476 61280514 -33992137 + AT_rich Low_complexity Low_complexity 1 38 0 4 1052 405 58 0 0 chr17 61280981 61281033 -33991618 + (TAAA)n Simple_repeat Simple_repeat 2 53 0 4 1052 2694 216 68 15 chr17 61281608 61282256 -33990395 - Lx2B LINE L1 -533 6467 5786 4 1052 1794 228 73 27 chr17 61282249 61282727 -33989924 + Lx3C LINE L1 6475 6974 -2 4 1052 345 162 0 0 chr17 61283376 61283444 -33989207 + A-rich Low_complexity Low_complexity 1 68 0 4 1052 280 285 139 43 chr17 61283877 61284064 -33988587 + L1M4b LINE L1 105 309 -7025 4 1052 897 153 3 6 chr17 61284148 61284298 -33988353 - Lx2B LINE L1 -432 5739 5560 4 1052 1665 153 25 48 chr17 61284298 61284613 -33988038 + Lx4A LINE L1 6749 7056 -2 4 1052 289 321 116 39 chr17 61284862 61285095 -33987556 + L1M4b LINE L1 903 1153 -6181 4 1052 690 158 147 31 chr17 61286153 61286316 -33986335 + RMER1B Other Other 883 1064 -2 4 1052 189 0 0 0 chr17 61286675 61286696 -33985955 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 4 1052 213 438 0 11 chr17 61287712 61287802 -33984849 + PB1D10 SINE Alu 10 98 -19 4 1052 318 348 79 6 chr17 61288499 61288664 -33983987 - MLT1E1A LTR MaLR -89 591 415 4 1052 1088 69 7 7 chr17 61289005 61289151 -33983500 - B1_Mm SINE Alu 0 147 2 4 1052 1307 302 127 9 chr17 61289539 61290083 -33982568 - Lx8 LINE L1 -648 6825 6218 4 1052 24 0 0 0 chr17 61290328 61290352 -33982299 + AT_rich Low_complexity Low_complexity 1 24 0 4 1052 436 167 25 16 chr17 61290401 61290523 -33982128 + (TA)n Simple_repeat Simple_repeat 2 124 0 4 1052 434 222 0 9 chr17 61290531 61290630 -33982021 + ORR1B2-int LTR MaLR 1293 1370 0 4 1052 348 191 16 0 chr17 61290609 61290672 -33981979 + ORR1B2 LTR MaLR 1 64 -303 4 1052 246 318 8 60 chr17 61290719 61290836 -33981815 - RMER12 LTR ERVK -466 856 746 4 1052 234 0 0 0 chr17 61291047 61291073 -33981578 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 4 1052 360 0 0 0 chr17 61291226 61291266 -33981385 + (TC)n Simple_repeat Simple_repeat 1 40 0 4 1052 2974 226 35 74 chr17 61291307 61292171 -33980480 - ORR1B2-int LTR MaLR -651 858 29 4 1052 965 230 127 9 chr17 61292163 61292391 -33980260 - ORR1B2 LTR MaLR -112 255 1 4 1052 1775 192 3 6 chr17 61293223 61293559 -33979092 + Lx2 LINE L1 6663 6997 0 4 1052 1156 138 16 0 chr17 61293661 61293849 -33978802 - B2_Mm2 SINE B2 -4 191 1 4 1052 7227 116 14 9 chr17 61293864 61294993 -33977658 - Lx LINE L1 -5 6649 5509 4 1052 3051 189 17 6 chr17 61294993 61295626 -33977025 + L1_Mm LINE L1 4682 5321 -562 4 1052 3140 118 50 48 chr17 61295626 61296498 -33976153 - RLTR13C1 LTR ERVK 0 983 1 4 1052 1528 108 4 1 chr17 61296498 61296738 -33975913 + L1_Mm LINE L1 5316 5588 -568 4 1052 2994 58 0 0 chr17 61297830 61298207 -33974444 - L1_Mus2 LINE L1 -2 6564 6188 4 1052 255 45 75 15 chr17 61299670 61299737 -33972914 + (CAAAA)n Simple_repeat Simple_repeat 2 72 0 4 1052 373 304 30 91 chr17 61300461 61300532 -33972119 + B4A SINE B4 14 71 -153 4 1052 221 341 65 72 chr17 61300532 61300671 -33971980 + B1_Mus2 SINE Alu 1 138 -9 4 1052 38 22 0 0 chr17 61300767 61300812 -33971839 + AT_rich Low_complexity Low_complexity 1 45 0 4 1052 26 50 0 0 chr17 61301533 61301573 -33971078 + AT_rich Low_complexity Low_complexity 1 40 0 4 1052 186 103 0 0 chr17 61301643 61301672 -33970979 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1052 300 53 0 0 chr17 61301862 61301900 -33970751 + (TTA)n Simple_repeat Simple_repeat 2 39 0 4 1052 943 173 46 25 chr17 61301900 61302096 -33970555 - Lx3B LINE L1 -8 6965 6766 4 1052 997 321 16 8 chr17 61302684 61303051 -33969600 + ORR1D2 LTR MaLR 1 370 0 4 1052 479 297 139 20 chr17 61303159 61303435 -33969216 - ORR1E LTR MaLR -18 352 8 4 1052 14241 2 0 0 chr17 61303764 61306048 -33966603 - L1Md_A LINE L1 0 6582 4298 4 1052 197 108 27 0 chr17 61306106 61306143 -33966508 + (TTA)n Simple_repeat Simple_repeat 2 39 0 4 1052 22 56 0 0 chr17 61306434 61306470 -33966181 + AT_rich Low_complexity Low_complexity 1 36 0 4 1052 21 0 0 0 chr17 61306613 61306634 -33966017 + AT_rich Low_complexity Low_complexity 1 21 0 4 1052 9557 170 55 23 chr17 61306686 61307309 -33965342 + L1VL4 LINE L1 385 1249 -5408 4 1052 291 28 0 0 chr17 61307309 61307345 -33965306 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 4 1052 9557 125 12 0 chr17 61307345 61308842 -33963809 + L1VL4 LINE L1 1250 2764 -3119 4 1052 4848 82 6 48 chr17 61308843 61309570 -33963081 + L1_Mus2 LINE L1 5871 6566 0 4 1052 660 111 0 0 chr17 61309570 61309669 -33962982 + (GA)n Simple_repeat Simple_repeat 1 99 0 4 1052 998 17 0 8 chr17 61309669 61309790 -33962861 + (GAA)n Simple_repeat Simple_repeat 3 122 0 4 1052 962 16 0 16 chr17 61309850 61309978 -33962673 + L1Md_A LINE L1 6457 6582 0 4 1052 195 42 0 0 chr17 61309990 61310014 -33962637 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1052 379 61 0 0 chr17 61311818 61311867 -33960784 + B1_Mm SINE Alu 45 93 -54 4 1052 220 136 0 22 chr17 61311882 61311927 -33960724 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 1052 315 311 93 29 chr17 61312654 61312769 -33959882 + B3 SINE B2 3 128 -88 4 1052 4020 122 2 5 chr17 61312769 61313355 -33959296 + MT2B2 LTR ERVL 1 584 0 4 1052 315 311 93 29 chr17 61313355 61313378 -33959273 + B3 SINE B2 129 150 -66 4 1052 366 74 0 0 chr17 61313384 61313438 -33959213 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1052 3428 201 51 19 chr17 61314589 61315409 -33957242 + Lx6 LINE L1 4491 5336 -544 4 1052 642 158 9 0 chr17 61315416 61315530 -33957121 - L1_Mur3 LINE L1 -416 5464 5350 4 1052 728 208 127 0 chr17 61315525 61315698 -33956953 + Lx4A LINE L1 6863 7057 -1 4 1052 954 273 30 27 chr17 61315692 61316057 -33956594 + Lx6 LINE L1 5724 6089 -1371 4 1052 2708 273 72 4 chr17 61316126 61316858 -33955793 + Lx6 LINE L1 6675 7456 -4 4 1052 201 74 0 0 chr17 61317129 61317156 -33955495 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 4 1052 2260 116 8 21 chr17 61317189 61317568 -33955083 - L1_Mus4 LINE L1 -3 6633 6260 4 1052 4629 84 9 11 chr17 61317570 61318218 -33954433 + L1_Mus4 LINE L1 5638 6284 -352 4 1052 22 0 0 0 chr17 61318977 61318999 -33953652 + AT_rich Low_complexity Low_complexity 1 22 0 4 1052 498 61 0 0 chr17 61320308 61320374 -33952277 + (TTCC)n Simple_repeat Simple_repeat 3 68 0 4 1052 24 0 0 0 chr17 61320501 61320525 -33952126 + AT_rich Low_complexity Low_complexity 1 24 0 4 1052 10931 121 8 41 chr17 61321027 61323295 -33949356 + L1Md_F3 LINE L1 3490 5586 -297 4 1052 7817 55 3 1 chr17 61323296 61324279 -33948372 + L1Md_F3 LINE L1 5588 6572 -12 4 1052 439 185 1 0 chr17 61324286 61324373 -33948278 + MYSERV6-int LTR ERVK 8812 8889 -70 4 1052 2186 121 30 3 chr17 61324427 61324766 -33947885 + RLTR1B LTR ERV1 165 512 0 4 1052 791 318 15 21 chr17 61324772 61325109 -33947542 - Lx9 LINE L1 -546 7098 6764 4 1052 5834 72 4 8 chr17 61325250 61326060 -33946591 + RLTR13C2 LTR ERVK 1 982 -1 4 1052 14326 129 43 41 chr17 61326077 61328591 -33944060 + ETnERV2-int LTR ERVK 1 2517 -4889 4 1052 2436 82 29 0 chr17 61328592 61328935 -33943716 + RLTR13C2 LTR ERVK 456 808 0 4 1052 232 219 154 15 chr17 61330496 61330561 -33942090 + Charlie24 DNA MER1_type 1580 1653 -797 4 1052 226 0 29 29 chr17 61331704 61331739 -33940912 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1052 911 151 36 0 chr17 61331850 61332016 -33940635 - L1_Mm LINE L1 -507 5376 5205 4 1052 4683 63 3 7 chr17 61332016 61332623 -33940028 + L1_Mus1 LINE L1 5963 6567 0 4 1052 348 273 30 18 chr17 61332702 61332870 -33939781 + (TATG)n Simple_repeat Simple_repeat 2 171 0 4 1052 630 339 10 10 chr17 61333026 61333223 -33939428 + B3 SINE B2 9 205 -11 4 1052 29 0 0 0 chr17 61333918 61333947 -33938704 + AT_rich Low_complexity Low_complexity 1 29 0 4 1052 512 340 32 83 chr17 61334498 61334716 -33937935 - ID_B1 SINE B4 -16 208 2 4 1052 2865 88 8 0 chr17 61334748 61335146 -33937505 + L1_Mus1 LINE L1 6167 6567 0 4 1052 23 33 0 0 chr17 61335160 61335190 -33937461 + AT_rich Low_complexity Low_complexity 1 30 0 4 1052 1683 273 83 28 chr17 61337096 61337770 -33934881 + L1_Rod LINE L1 5 715 -6457 4 1052 1150 36 0 0 chr17 61337816 61337954 -33934697 + B1_Mus2 SINE Alu 1 138 -9 4 1052 567 0 0 0 chr17 61337954 61338017 -33934634 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 1052 527 29 14 0 chr17 61338675 61338744 -33933907 + (TG)n Simple_repeat Simple_repeat 2 71 0 4 1052 5582 88 9 20 chr17 61338752 61339570 -33933081 + RLTR13C2 LTR ERVK 1 1033 0 4 1052 1006 276 15 84 chr17 61339610 61339639 -33933012 + ORR1C2 LTR MaLR 6 33 -341 4 1052 2601 114 30 15 chr17 61339639 61340039 -33932612 - MTB_Mm LTR MaLR -1 406 1 4 1052 1006 276 15 84 chr17 61340039 61340341 -33932310 + ORR1C2 LTR MaLR 34 314 -60 4 1052 5408 161 15 1 chr17 61340365 61341295 -33931356 - Lx2 LINE L1 -1 6996 6054 4 1052 6385 171 8 15 chr17 61341295 61341529 -33931122 + L1_Mus2 LINE L1 4706 4930 -953 4 1052 847 130 12 115 chr17 61341529 61341694 -33930957 - B1_Mus1 SINE Alu 0 148 1 4 131 6385 161 30 23 chr17 61341694 61343317 -33929334 + L1_Mus2 LINE L1 4931 6566 0 4 1053 759 271 46 10 chr17 61343377 61343571 -33929080 + ORR1C2-int LTR MaLR 1 201 -1169 4 1053 592 262 65 0 chr17 61343571 61343739 -33928912 + Lx7 LINE L1 7182 7360 -336 4 1053 331 224 48 79 chr17 61343728 61343854 -33928797 + Lx7 LINE L1 7310 7431 -265 4 1053 526 326 43 83 chr17 61343854 61344261 -33928390 - RMER15 LTR ERVL -111 464 15 4 1053 1164 244 63 60 chr17 61344542 61344874 -33927777 + ORR1C2 LTR MaLR 2 334 -50 4 1053 4344 14 2 12 chr17 61344875 61345373 -33927278 - MT2_Mm LTR ERVL 0 493 1 4 1053 314 0 0 0 chr17 61345373 61345411 -33927240 - MERVL-int LTR ERVL 0 5485 5448 4 1053 392 167 46 35 chr17 61345411 61345498 -33927153 - ORR1A3-int LTR MaLR -1323 640 553 4 1053 47310 15 6 0 chr17 61345498 61350825 -33921826 - MERVL-int LTR ERVL -125 5360 1 4 1053 4344 14 2 12 chr17 61350825 61351323 -33921328 - MT2_Mm LTR ERVL 0 493 1 4 1053 270 143 0 0 chr17 61351331 61351373 -33921278 + ORR1C2 LTR MaLR 340 381 -3 4 1053 518 308 104 49 chr17 61351597 61352252 -33920399 + L1MD3 LINE L1 5279 5976 -2019 4 1053 438 20 0 0 chr17 61354125 61354176 -33918475 + (TCTA)n Simple_repeat Simple_repeat 3 53 0 4 1053 417 168 0 63 chr17 61354190 61354381 -33918270 + (TA)n Simple_repeat Simple_repeat 2 180 0 5 1053 532 210 6 23 chr17 61354438 61354609 -33918042 + (TA)n Simple_repeat Simple_repeat 1 168 0 5 1053 235 374 19 0 chr17 61354664 61354771 -33917880 - Lx8 LINE L1 -252 7221 7113 5 1053 390 42 0 0 chr17 61356260 61356308 -33916343 + (TTCC)n Simple_repeat Simple_repeat 3 50 0 5 1053 281 26 26 0 chr17 61356506 61356544 -33916107 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1053 408 20 0 0 chr17 61356572 61356621 -33916030 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1053 225 139 0 0 chr17 61358189 61358232 -33914419 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1053 356 132 43 11 chr17 61358812 61358904 -33913747 + (TATG)n Simple_repeat Simple_repeat 2 96 0 5 1053 446 289 22 12 chr17 61359462 61359655 -33912996 - L1_Mur3 LINE L1 -4005 1842 1643 5 1053 1164 285 109 13 chr17 61359761 61360208 -33912443 + RMER15 LTR ERVL 30 550 -25 5 1053 231 246 0 0 chr17 61360279 61360336 -33912315 - L1_Mm LINE L1 -4288 1595 1539 5 1053 236 139 70 0 chr17 61360467 61360510 -33912141 + RMER2 LTR ERV1 17 62 -505 5 1053 276 268 85 144 chr17 61360550 61360820 -33911831 + RMER2 LTR ERV1 287 540 -27 5 1053 1791 183 16 22 chr17 61360872 61361235 -33911416 - RMER6C LTR ERVK -326 364 4 5 1053 537 125 0 0 chr17 61361235 61361323 -33911328 + (CA)n Simple_repeat Simple_repeat 2 89 0 5 1053 21 0 0 0 chr17 61361397 61361418 -33911233 + AT_rich Low_complexity Low_complexity 1 21 0 5 1053 787 300 32 6 chr17 61361555 61361894 -33910757 + L1MB8 LINE L1 5536 5883 -295 5 1053 498 75 0 0 chr17 61362190 61362257 -33910394 + (TA)n Simple_repeat Simple_repeat 1 67 0 5 1053 1249 236 49 118 chr17 61362275 61362665 -33909986 + ORR1C1 LTR MaLR 14 376 -2 5 1053 13663 125 38 21 chr17 61362747 61365526 -33907125 - L1_Mus2 LINE L1 0 6566 3742 5 1053 6383 37 1 0 chr17 61365610 61366372 -33906279 + L1Md_T LINE L1 5820 6582 0 5 1053 315 65 0 0 chr17 61366945 61366991 -33905660 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 5 1053 415 0 0 0 chr17 61367157 61367206 -33905445 - B1_Mm SINE Alu -9 138 90 5 1053 549 0 0 0 chr17 61369859 61369920 -33902731 + (TC)n Simple_repeat Simple_repeat 1 61 0 5 1053 1118 68 7 0 chr17 61369921 61370067 -33902584 - B1_Mus1 SINE Alu -1 147 1 5 1053 246 207 0 0 chr17 61370220 61370278 -33902373 + CT-rich Low_complexity Low_complexity 3 60 0 5 1053 1267 72 0 11 chr17 61370647 61370829 -33901822 + (TTC)n Simple_repeat Simple_repeat 1 180 0 5 1053 427 142 0 45 chr17 61370829 61370940 -33901711 + CT-rich Low_complexity Low_complexity 1 106 0 5 1053 430 147 0 0 chr17 61371144 61371212 -33901439 + MT2A LTR ERVL 1 68 -465 5 1053 249 33 0 0 chr17 61371212 61371242 -33901409 + (A)n Simple_repeat Simple_repeat 1 30 0 5 1053 252 0 0 0 chr17 61371321 61371349 -33901302 + (TA)n Simple_repeat Simple_repeat 1 28 0 5 1053 560 214 139 37 chr17 61372355 61372593 -33900058 + Lx9 LINE L1 4804 5098 -782 5 1053 348 148 0 0 chr17 61372714 61372775 -33899876 - Lx3A LINE L1 -7 6974 6914 5 1053 1807 242 47 19 chr17 61373005 61373024 -33899627 + Lx9 LINE L1 5313 5327 -520 5 1053 2742 3 0 0 chr17 61373024 61373331 -33899320 + L1Md_A LINE L1 6276 6582 0 5 1053 1807 259 45 25 chr17 61373331 61374054 -33898597 + Lx9 LINE L1 5328 6104 -1540 5 1053 393 305 8 0 chr17 61374123 61374241 -33898410 + Lx9 LINE L1 6306 6424 -1220 5 1053 837 203 0 28 chr17 61374408 61374590 -33898061 - ORR1C1 LTR MaLR 0 378 202 5 1053 5729 123 11 6 chr17 61374994 61375891 -33896760 + Lx3A LINE L1 6064 6965 -16 5 1053 207 0 0 0 chr17 61375893 61375916 -33896735 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 5 1053 350 207 115 0 chr17 61377533 61377620 -33895031 + Lx9 LINE L1 6568 6664 -980 5 1053 231 188 0 0 chr17 61377644 61377692 -33894959 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1053 258 183 134 0 chr17 61377718 61377800 -33894851 + Lx9 LINE L1 7546 7638 -6 5 1053 2803 161 6 21 chr17 61377812 61378282 -33894369 - RLTR17 LTR ERVK 0 692 230 5 1053 603 109 33 0 chr17 61378282 61378374 -33894277 - B1_Mus2 SINE Alu 0 147 53 5 1053 715 160 91 8 chr17 61378364 61378496 -33894155 - RLTR17 LTR ERVK -452 240 98 5 1053 324 0 0 0 chr17 61378523 61378559 -33894092 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 5 1053 23 0 0 0 chr17 61379656 61379679 -33892972 + AT_rich Low_complexity Low_complexity 1 23 0 5 1053 772 314 86 17 chr17 61380461 61380820 -33891831 + Lx8 LINE L1 7089 7472 -1 5 1053 982 305 42 31 chr17 61381086 61381607 -33891044 + L1_Rod LINE L1 5311 5837 -10 5 1053 1498 255 57 55 chr17 61381637 61382131 -33890520 + RMER19C LTR ERVK 117 611 0 5 1053 435 332 125 45 chr17 61382446 61382799 -33889852 + Lx8 LINE L1 7091 7471 -2 5 1053 360 0 0 0 chr17 61384534 61384574 -33888077 + (TAA)n Simple_repeat Simple_repeat 3 42 0 5 1053 1109 95 0 0 chr17 61384660 61384807 -33887844 - B1_Mm SINE Alu 0 147 1 5 1053 345 100 0 0 chr17 61385862 61385912 -33886739 + (TTCA)n Simple_repeat Simple_repeat 1 50 0 5 1053 3529 211 26 16 chr17 61385912 61386641 -33886010 - Lx5 LINE L1 -15 7035 6301 5 1053 965 249 39 111 chr17 61387166 61387572 -33885079 - ORR1C2 LTR MaLR -4 380 4 5 1053 1991 197 29 29 chr17 61387662 61388154 -33884497 - Lx3C LINE L1 -483 6493 6002 5 1053 1726 224 61 2 chr17 61388158 61388583 -33884068 + Lx3C LINE L1 6524 6973 -3 5 1053 203 79 0 26 chr17 61388591 61388630 -33884021 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 5 1053 39 22 0 0 chr17 61388751 61388797 -33883854 + AT_rich Low_complexity Low_complexity 1 46 0 5 1053 3731 145 23 23 chr17 61389302 61389965 -33882686 + Lx LINE L1 5989 6651 -3 5 1053 1636 65 5 0 chr17 61390827 61391074 -33881577 - L1_Mus2 LINE L1 0 6566 6345 5 1053 33 43 0 0 chr17 61391428 61391475 -33881176 + AT_rich Low_complexity Low_complexity 1 47 0 5 1053 369 0 0 0 chr17 61392515 61392556 -33880095 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 1053 21 36 0 0 chr17 61393887 61393915 -33878736 + AT_rich Low_complexity Low_complexity 1 28 0 5 1053 7386 139 14 13 chr17 61395076 61397172 -33875479 + Lx LINE L1 4545 6648 -6 5 1053 192 305 8 80 chr17 61397712 61397821 -33874830 + MIR SINE MIR 83 187 -81 5 1053 211 143 24 0 chr17 61398085 61398127 -33874524 + T-rich Low_complexity Low_complexity 3 45 0 5 1053 374 132 0 13 chr17 61398786 61398863 -33873788 + (CAGA)n Simple_repeat Simple_repeat 1 76 0 5 1053 401 143 155 0 chr17 61398866 61398950 -33873701 + HAL1-3A_ME LINE L1 1976 2072 -786 5 1053 683 310 24 57 chr17 61399082 61399328 -33873323 + 7SK RNA RNA 9 246 -85 5 1053 23 0 0 0 chr17 61399477 61399500 -33873151 + AT_rich Low_complexity Low_complexity 1 23 0 5 1053 694 309 133 32 chr17 61399752 61400090 -33872561 - MTE2b LTR MaLR 0 379 8 5 1053 277 353 24 28 chr17 61400098 61400311 -33872340 + L1M4 LINE L1 4958 5169 -977 5 1053 32 26 0 0 chr17 61400363 61400402 -33872249 + AT_rich Low_complexity Low_complexity 1 39 0 5 1053 23 86 0 0 chr17 61400789 61400847 -33871804 + AT_rich Low_complexity Low_complexity 1 58 0 5 1053 1059 89 5 0 chr17 61401224 61401401 -33871250 - L1_Mm LINE L1 -462 5421 5234 5 1053 981 279 74 7 chr17 61401397 61401693 -33870958 + Lx8 LINE L1 6937 7252 -221 5 1053 4382 2 0 0 chr17 61401826 61402314 -33870337 - L1Md_A LINE L1 0 6582 6095 5 1053 5206 67 13 0 chr17 61402314 61403001 -33869650 - L1_Mm LINE L1 -581 5302 4607 5 1053 7200 38 17 0 chr17 61402996 61403876 -33868775 + L1Md_F3 LINE L1 5669 6563 -21 5 1053 513 0 0 0 chr17 61403876 61403933 -33868718 + (TA)n Simple_repeat Simple_repeat 1 57 0 5 1053 243 0 0 0 chr17 61404510 61404537 -33868114 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1053 319 340 88 7 chr17 61404632 61404780 -33867871 - ORR1D-int LTR MaLR -269 1101 942 5 1053 7265 96 13 10 chr17 61405227 61407077 -33865574 + L1VL2 LINE L1 174 2027 -1588 5 1053 1389 273 77 56 chr17 61407163 61407986 -33864665 - L1_Rod LINE L1 -1207 4640 3801 5 1053 259 80 39 20 chr17 61408022 61408073 -33864578 + (CAAAA)n Simple_repeat Simple_repeat 4 55 0 5 1053 1017 298 108 43 chr17 61408261 61408790 -33863861 + MTC-int LTR MaLR 681 1243 -15 5 1053 243 277 29 19 chr17 61409175 61409278 -33863373 - L1M5 LINE L1 -1937 4209 4106 5 1053 248 297 34 8 chr17 61409433 61409552 -33863099 - L1M5 LINE L1 -2196 3950 3829 5 1053 1300 249 43 23 chr17 61410281 61410626 -33862025 + Lx7 LINE L1 6915 7266 -430 5 1053 1194 41 7 0 chr17 61411349 61411495 -33861156 + B1_Mm SINE Alu 1 147 0 5 1053 207 0 0 0 chr17 61411505 61411528 -33861123 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1053 180 135 0 0 chr17 61411645 61411682 -33860969 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 5 1053 222 62 0 0 chr17 61411741 61411773 -33860878 + (A)n Simple_repeat Simple_repeat 1 32 0 5 1053 353 296 165 46 chr17 61411861 61412098 -33860553 + L1M2 LINE L1 5476 5740 -551 5 1053 1025 249 56 42 chr17 61412114 61412491 -33860160 + Lx9 LINE L1 4837 5218 -629 5 1053 1106 253 52 82 chr17 61412521 61412909 -33859742 - ORR1C2 LTR MaLR 0 384 9 5 1053 1237 309 32 34 chr17 61412944 61413594 -33859057 + Lx9 LINE L1 5283 5967 -1677 5 1053 27 92 0 0 chr17 61413787 61413863 -33858788 + AT_rich Low_complexity Low_complexity 1 76 0 5 1053 2335 277 82 39 chr17 61414039 61414880 -33857771 - Lx7 LINE L1 -442 7254 6378 5 1053 1909 179 66 61 chr17 61415199 61415656 -33856995 + RMER6B LTR ERVK 1 459 -2 5 1053 1754 333 89 29 chr17 61415671 61416707 -33855944 + Lx9 LINE L1 6504 7601 -43 5 1053 21 0 0 0 chr17 61417250 61417271 -33855380 + AT_rich Low_complexity Low_complexity 1 21 0 5 1053 245 51 26 0 chr17 61418076 61418115 -33854536 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 5 1053 1057 180 21 0 chr17 61419121 61419310 -33853341 - ORR1B1 LTR MaLR -11 383 191 5 1053 281 246 0 0 chr17 61419303 61419364 -33853287 - ORR1B1 LTR MaLR -333 61 1 5 1053 1966 192 21 5 chr17 61419364 61419747 -33852904 - ORR1B1-int LTR MaLR 0 1509 1121 5 1053 445 283 0 0 chr17 61419823 61419943 -33852708 + Lx2B LINE L1 6880 6999 -1 5 1053 255 348 24 95 chr17 61420491 61420786 -33851865 - Lx8 LINE L1 -3 7470 7197 5 1053 240 35 0 0 chr17 61420798 61420827 -33851824 + (CAGGA)n Simple_repeat Simple_repeat 3 31 0 5 1053 1287 283 107 0 chr17 61421086 61421471 -33851180 - Lx6 LINE L1 -9 7451 7026 5 1053 1406 258 104 64 chr17 61421471 61422002 -33850649 - RMER19C LTR ERVK 0 611 60 6 1053 2435 210 108 58 chr17 61422002 61422659 -33849992 - Lx6 LINE L1 -438 7022 6333 5 1053 1058 291 37 68 chr17 61422673 61423616 -33849035 + L1_Mur3 LINE L1 3559 4476 -1667 6 1053 336 24 0 0 chr17 61423990 61424031 -33848620 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1053 417 20 0 0 chr17 61424375 61424425 -33848226 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1053 402 57 0 0 chr17 61426875 61426928 -33845723 + (CA)n Simple_repeat Simple_repeat 1 53 0 6 1053 221 59 37 56 chr17 61427341 61427395 -33845256 + CT-rich Low_complexity Low_complexity 4 56 0 6 1053 587 296 182 38 chr17 61428284 61428789 -33843862 - MER45B DNA Tip100 -1 1039 462 6 1053 469 271 0 0 chr17 61429130 61429237 -33843414 - Lx8 LINE L1 -278 7195 7089 6 1053 222 174 0 0 chr17 61431534 61431580 -33841071 + T-rich Low_complexity Low_complexity 1 46 0 6 1053 405 0 0 0 chr17 61432870 61432915 -33839736 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1053 481 303 8 0 chr17 61433526 61433648 -33839003 - B1F SINE Alu 0 149 27 6 1053 282 299 0 0 chr17 61434312 61434389 -33838262 + (TG)n Simple_repeat Simple_repeat 2 78 0 6 1053 236 322 23 11 chr17 61434607 61434695 -33837956 - L2a LINE L2 0 3426 3338 6 1053 267 104 0 0 chr17 61435030 61435078 -33837573 + (A)n Simple_repeat Simple_repeat 1 48 0 6 1053 296 290 30 10 chr17 61435080 61435181 -33837470 - PB1D7 SINE Alu -16 104 2 6 1053 378 272 87 8 chr17 61435220 61435346 -33837305 - L1M2 LINE L1 -535 5756 5621 6 1053 226 261 113 23 chr17 61435939 61436072 -33836579 - L1M2 LINE L1 -667 5624 5480 6 1053 439 273 36 6 chr17 61436116 61436282 -33836369 + L1MA7 LINE L1 6089 6259 -32 6 1053 411 113 0 0 chr17 61437412 61437474 -33835177 + (GAAAA)n Simple_repeat Simple_repeat 4 65 0 6 1053 33 43 0 0 chr17 61437686 61437733 -33834918 + AT_rich Low_complexity Low_complexity 1 47 0 6 1053 829 130 30 0 chr17 61437837 61437968 -33834683 + Lx3B LINE L1 6540 6674 -299 6 1053 9423 58 0 0 chr17 61437967 61439180 -33833471 - L1_Mm LINE L1 -2403 3480 2268 6 1053 4734 50 7 2 chr17 61439180 61439779 -33832872 + L1Md_F2 LINE L1 5979 6580 -2 6 1053 186 133 0 0 chr17 61440026 61440056 -33832595 + (A)n Simple_repeat Simple_repeat 1 30 0 6 1053 1713 146 6 43 chr17 61440057 61440379 -33832272 + Lx3B LINE L1 6661 6970 -3 6 1053 22 0 0 0 chr17 61440538 61440560 -33832091 + AT_rich Low_complexity Low_complexity 1 22 0 6 1053 384 22 0 0 chr17 61441293 61441338 -33831313 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 1053 614 254 97 18 chr17 61441914 61442131 -33830520 - Tigger15a DNA TcMar -29 686 453 6 1053 7149 41 3 0 chr17 61446216 61447404 -33825247 + L1Md_F2 LINE L1 5248 6437 -145 6 1053 2041 116 21 33 chr17 61447404 61447735 -33824916 + L1_Mus4 LINE L1 6304 6630 -6 6 1053 635 319 139 24 chr17 61447735 61448404 -33824247 + L1M2 LINE L1 4473 5218 -925 6 1053 300 53 0 0 chr17 61448888 61448926 -33823725 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 6 1053 2800 152 13 2 chr17 61448942 61449404 -33823247 - Lx3B LINE L1 -3 6970 6504 6 1053 4954 39 2 2 chr17 61449638 61450322 -33822329 - L1Md_F2 LINE L1 0 6582 5988 6 1053 439 358 7 15 chr17 61451312 61451448 -33821203 + RSINE1 SINE B4 2 136 -29 6 1053 975 226 121 92 chr17 61451812 61452191 -33820460 - MT2A LTR ERVL -86 515 3 6 1053 234 0 0 0 chr17 61452895 61452921 -33819730 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 1053 641 282 159 4 chr17 61452982 61453252 -33819399 + L1_Mur3 LINE L1 328 639 -7089 6 1053 6579 189 72 72 chr17 61453249 61453515 -33819136 + L1_Mur3 LINE L1 2357 2643 -3237 6 1053 450 0 0 0 chr17 61453515 61453565 -33819086 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1053 6579 189 72 72 chr17 61453565 61454943 -33817708 + L1_Mur3 LINE L1 2644 3988 -1892 6 1053 3954 118 157 74 chr17 61454943 61455778 -33816873 - RMER17A2 LTR ERVK -2 904 1 6 1053 6579 189 72 72 chr17 61455778 61456038 -33816613 + L1_Mur3 LINE L1 3989 4261 -1619 6 1053 797 208 47 56 chr17 61456038 61456252 -33816399 + RMER19B LTR ERVK 691 902 0 6 1053 257 333 15 114 chr17 61456978 61457110 -33815541 + RSINE1 SINE B4 3 121 -44 6 1053 189 0 0 0 chr17 61457113 61457134 -33815517 + (CATA)n Simple_repeat Simple_repeat 2 22 0 6 1053 594 215 0 0 chr17 61457137 61457272 -33815379 + (TATATG)n Simple_repeat Simple_repeat 3 137 0 6 1053 1215 265 50 48 chr17 61457452 61457935 -33814716 + RMER15-int LTR ERVL 876 1359 -3640 6 1053 416 261 176 41 chr17 61458030 61458204 -33814447 - Lx8 LINE L1 -1068 6405 6200 6 1053 720 83 0 0 chr17 61458204 61458313 -33814338 + (TG)n Simple_repeat Simple_repeat 2 110 0 6 1053 2494 142 19 21 chr17 61458321 61458753 -33813898 - Lx LINE L1 0 6654 6224 6 1053 416 261 176 41 chr17 61458753 61458813 -33813838 - Lx8 LINE L1 -1278 6195 6130 6 1053 241 223 38 19 chr17 61459585 61459690 -33812961 + (TA)n Simple_repeat Simple_repeat 2 108 0 6 1053 291 28 0 0 chr17 61459698 61459734 -33812917 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1053 207 0 0 0 chr17 61459968 61459991 -33812660 + (T)n Simple_repeat Simple_repeat 1 23 0 6 1053 1122 180 23 65 chr17 61460136 61460398 -33812253 - RMER6A LTR ERVK 0 756 506 6 1053 790 318 29 78 chr17 61460403 61460785 -33811866 + Lx9 LINE L1 6798 7160 -484 6 1053 5272 131 43 8 chr17 61460809 61461712 -33810939 - Lx2A1 LINE L1 0 7008 6074 6 1053 241 51 75 25 chr17 61461748 61461788 -33810863 - Lx2A1 LINE L1 -668 5986 5945 6 1053 308 128 43 0 chr17 61462945 61462992 -33809659 + HAL1-3A_ME LINE L1 1964 2012 -846 6 1053 261 57 0 0 chr17 61463006 61463041 -33809610 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 1053 202 342 12 12 chr17 61463814 61463894 -33808757 + MIRb SINE MIR 51 130 -138 6 1053 21 0 0 0 chr17 61464282 61464303 -33808348 + AT_rich Low_complexity Low_complexity 1 21 0 6 1053 351 60 0 0 chr17 61464476 61464526 -33808125 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 1053 504 48 0 0 chr17 61464526 61464589 -33808062 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 1053 579 351 83 35 chr17 61464590 61464879 -33807772 + MTEa LTR MaLR 77 379 0 6 1053 338 336 50 25 chr17 61464881 61465083 -33807568 + MTEa-int LTR MaLR 2 234 -1346 6 1053 883 336 56 67 chr17 61465176 61465735 -33806916 + MTEa-int LTR MaLR 219 749 -831 6 1053 267 54 0 0 chr17 61465747 61465784 -33806867 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 6 1053 722 293 139 48 chr17 61465830 61466164 -33806487 - MTE2b LTR MaLR 0 379 16 6 1053 682 317 85 46 chr17 61466186 61466576 -33806075 - MTE2b-int LTR MaLR -7 1573 1169 6 1053 189 0 0 0 chr17 61466894 61466915 -33805736 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 6 1053 3793 134 22 16 chr17 61466915 61467545 -33805106 - Lx3A LINE L1 -5 6976 6343 6 131 35625 65 6 4 chr17 61467547 61473444 -33799207 - L1Md_F2 LINE L1 -4 6578 670 6 1054 491 122 14 0 chr17 61473436 61473510 -33799141 - L1Md_F2 LINE L1 -6282 334 260 6 1054 297 51 0 0 chr17 61473595 61473634 -33799017 + (GA)n Simple_repeat Simple_repeat 2 40 0 6 1054 343 320 9 55 chr17 61473641 61473750 -33798901 + RSINE1 SINE B4 33 136 -29 6 1054 345 299 0 33 chr17 61473862 61473952 -33798699 + ORR1B2 LTR MaLR 66 152 -215 6 1054 423 0 0 0 chr17 61473959 61474006 -33798645 + (TA)n Simple_repeat Simple_repeat 2 48 0 6 1054 390 91 0 0 chr17 61474069 61474124 -33798527 + (CATA)n Simple_repeat Simple_repeat 2 56 0 6 1054 1270 216 62 13 chr17 61474457 61474804 -33797847 + ORR1C1 LTR MaLR 1 378 0 6 1054 465 84 0 0 chr17 61475083 61475154 -33797497 + (TG)n Simple_repeat Simple_repeat 1 71 0 6 1054 367 327 0 71 chr17 61475155 61475267 -33797384 - B3A SINE B2 -47 151 48 6 1054 333 363 13 65 chr17 61476098 61476328 -33796323 + MTEa-int LTR MaLR 925 1142 -438 6 1054 251 246 56 28 chr17 61477141 61477212 -33795439 - MER5A DNA MER1_type -110 79 7 6 1054 457 310 99 0 chr17 61477817 61477959 -33794692 + B3A SINE B2 1 156 -42 6 1054 431 107 13 0 chr17 61477961 61478036 -33794615 + (CA)n Simple_repeat Simple_repeat 1 76 0 6 1054 21 0 0 0 chr17 61478098 61478119 -33794532 + AT_rich Low_complexity Low_complexity 1 21 0 6 1054 246 229 0 16 chr17 61478289 61478351 -33794300 + CT-rich Low_complexity Low_complexity 2 62 0 6 1054 7258 95 1 2 chr17 61478507 61479766 -33792885 - L1_Mus1 LINE L1 0 6567 5310 6 1054 5169 100 3 0 chr17 61479765 61480493 -33792158 + L1_Mus1 LINE L1 4563 5292 -591 6 1054 216 0 0 0 chr17 61480946 61480970 -33791681 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1054 4370 138 15 3 chr17 61481726 61482408 -33790243 - Lx2A1 LINE L1 -5 7003 6314 6 1054 1797 240 65 19 chr17 61482413 61482994 -33789657 + Lx9 LINE L1 7028 7635 -9 6 1054 1019 311 47 5 chr17 61484465 61484866 -33787785 + Lx9 LINE L1 7056 7473 -171 6 1054 24 0 0 0 chr17 61484985 61485009 -33787642 + AT_rich Low_complexity Low_complexity 1 24 0 6 1054 639 257 29 0 chr17 61485122 61485258 -33787393 + B1_Mus1 SINE Alu 1 140 -8 6 1054 396 0 0 0 chr17 61485258 61485302 -33787349 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 6 1054 227 224 23 34 chr17 61485312 61485400 -33787251 + A-rich Low_complexity Low_complexity 4 90 0 6 1054 308 164 15 0 chr17 61485586 61485653 -33786998 + (TA)n Simple_repeat Simple_repeat 1 68 0 6 1054 24 53 0 0 chr17 61485707 61485745 -33786906 + AT_rich Low_complexity Low_complexity 1 38 0 6 1054 4650 135 11 16 chr17 61486018 61486776 -33785875 - Lx2 LINE L1 0 6997 6244 6 1054 608 261 80 18 chr17 61487808 61488034 -33784617 + Charlie20a DNA Charlie 400 639 -168 6 1054 1099 264 104 30 chr17 61488620 61488986 -33783665 - MTD LTR MaLR -31 388 5 6 1054 847 251 54 54 chr17 61489507 61489747 -33782904 - Lx6 LINE L1 -27 7433 7194 6 1054 1431 303 115 31 chr17 61489756 61490443 -33782208 - Lx8 LINE L1 -172 7301 6557 6 1054 510 287 51 0 chr17 61490460 61490617 -33782034 - Lx8 LINE L1 -991 6482 6318 6 1054 428 337 30 15 chr17 61490964 61491163 -33781488 - B3 SINE B2 -13 203 2 6 1054 535 274 81 24 chr17 61491184 61491569 -33781082 - L1_Mur3 LINE L1 -2499 3381 3005 6 1054 1020 93 21 0 chr17 61491569 61491709 -33780942 - B1_Mus1 SINE Alu -5 143 1 6 1054 508 274 88 25 chr17 61491709 61491720 -33780931 - L1_Mur3 LINE L1 -3139 3004 2994 6 1054 780 302 43 60 chr17 61491826 61492244 -33780407 - L1_Mur3 LINE L1 -3410 2470 2055 6 1054 457 114 0 0 chr17 61492244 61492323 -33780328 - L1Md_F2 LINE L1 -2 6580 6502 6 1054 780 302 43 60 chr17 61492323 61492524 -33780127 - L1_Mur3 LINE L1 -3826 2054 1861 6 1054 2211 37 11 0 chr17 61492584 61492854 -33779797 + L1Md_F2 LINE L1 6308 6580 -2 6 1054 486 0 0 0 chr17 61493074 61493128 -33779523 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 1054 830 10 10 0 chr17 61493128 61493226 -33779425 + (CA)n Simple_repeat Simple_repeat 1 100 0 7 1054 1729 254 44 69 chr17 61493273 61493955 -33778696 + L1_Mur3 LINE L1 53 717 -6995 7 1054 235 307 0 102 chr17 61493962 61494060 -33778591 - MT2A LTR ERVL -73 460 373 7 1054 1739 191 10 97 chr17 61495460 61495843 -33776808 + ORR1B1 LTR MaLR 38 387 -7 7 1054 456 214 23 93 chr17 61495844 61495973 -33776678 - Lx6 LINE L1 -95 7365 7246 7 1054 476 370 19 23 chr17 61495990 61496247 -33776404 + RMER15 LTR ERVL 275 530 -45 7 1054 827 117 0 46 chr17 61496500 61496652 -33775999 - L1Md_F2 LINE L1 0 6582 6438 7 1054 2804 66 107 0 chr17 61496661 61497054 -33775597 + L1_Mus1 LINE L1 5993 6427 -140 7 1054 413 318 52 55 chr17 61497158 61497448 -33775203 + B4A SINE B4 4 292 0 7 1054 23 54 0 0 chr17 61497849 61497886 -33774765 + AT_rich Low_complexity Low_complexity 1 37 0 7 1054 8040 48 3 2 chr17 61497935 61498985 -33773666 + L1Md_F3 LINE L1 5514 6564 -20 7 1054 31 0 0 0 chr17 61498985 61499016 -33773635 + AT_rich Low_complexity Low_complexity 1 31 0 7 1054 257 253 0 21 chr17 61499107 61499204 -33773447 + A-rich Low_complexity Low_complexity 4 98 0 7 1054 24 53 0 0 chr17 61499241 61499279 -33773372 + AT_rich Low_complexity Low_complexity 1 38 0 7 1054 973 180 87 0 chr17 61499374 61499580 -33773071 + URR1A DNA MER1_type 3 226 0 7 1054 1311 65 0 8 chr17 61501243 61501506 -33771145 + (GAAA)n Simple_repeat Simple_repeat 1 261 0 1 1054 246 245 88 39 chr17 61502332 61502434 -33770217 - L1ME3A LINE L1 -210 5963 5857 2 1054 594 121 0 0 chr17 61502582 61502698 -33769953 + (TC)n Simple_repeat Simple_repeat 1 116 0 3 1054 645 14 0 0 chr17 61502698 61502772 -33769879 + (TG)n Simple_repeat Simple_repeat 1 74 0 4 1054 396 0 0 0 chr17 61503060 61503104 -33769547 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1054 522 345 33 14 chr17 61503322 61503534 -33769117 - Lx8 LINE L1 -143 7330 7115 6 1054 1816 222 8 26 chr17 61503739 61504123 -33768528 + ORR1B1 LTR MaLR 16 392 -2 7 1054 425 370 51 40 chr17 61504195 61504491 -33768160 + Lx8 LINE L1 6321 6619 -854 8 1054 7052 179 24 22 chr17 61504517 61507183 -33765468 - Lx2 LINE L1 -25 6972 4439 9 1054 7152 90 11 19 chr17 61507216 61508256 -33764395 + L1_Mus2 LINE L1 5540 6566 0 1 1054 7384 182 32 4 chr17 61508333 61509703 -33762948 - Lx2B LINE L1 -5 6995 5587 1 1054 11751 173 32 9 chr17 61509716 61512059 -33760592 + L1_Mur2 LINE L1 3071 5466 -411 1 1054 316 335 45 32 chr17 61512118 61512275 -33760376 - MLT1D LTR MaLR -339 166 8 1 1054 472 299 17 0 chr17 61512294 61512411 -33760240 + RSINE1 SINE B4 4 122 -43 1 1054 348 338 77 44 chr17 61512446 61512786 -33759865 - Arthur1B DNA Tip100 -126 1099 749 1 1054 699 340 171 23 chr17 61512851 61513372 -33759279 - Arthur1B DNA Tip100 -578 647 50 1 1054 18136 98 19 9 chr17 61513484 61517044 -33755607 + L1Md_F LINE L1 392 3985 -1898 1 1054 33347 49 20 16 chr17 61517043 61521553 -33751098 + L1Md_Gf LINE L1 253 4920 -966 1 1054 253 167 46 77 chr17 61521553 61521618 -33751033 - RMER20A LTR ERVK -268 248 186 1 1054 33347 49 20 16 chr17 61521618 61522263 -33750388 + L1Md_Gf LINE L1 4921 5589 -297 1 1054 8369 34 0 0 chr17 61522263 61523253 -33749398 + L1Md_T LINE L1 5587 6576 -6 1 1054 243 0 0 0 chr17 61523265 61523292 -33749359 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1054 11249 78 4 1 chr17 61523293 61524819 -33747832 + L1Md_F LINE L1 3987 5516 -367 1 1054 1992 88 4 0 chr17 61524821 61525095 -33747556 + L1Md_F2 LINE L1 6303 6577 -5 2 1054 441 0 0 0 chr17 61525098 61525147 -33747504 + (TAAA)n Simple_repeat Simple_repeat 3 51 0 2 1054 250 392 8 24 chr17 61525148 61525271 -33747380 - MTE-int LTR MaLR -521 849 729 2 1054 787 317 82 45 chr17 61525338 61525715 -33746936 - MTE-int LTR MaLR -816 764 374 2 1054 372 316 28 28 chr17 61525750 61525932 -33746719 - L1M4 LINE L1 -3457 3187 3006 2 1054 35 41 0 0 chr17 61526303 61526352 -33746299 + AT_rich Low_complexity Low_complexity 1 49 0 2 1054 638 308 50 32 chr17 61527077 61527298 -33745353 - B4A SINE B4 -20 272 48 2 1054 260 302 203 20 chr17 61527431 61527732 -33744919 - L1M4 LINE L1 -5058 1484 1129 2 1054 241 206 42 56 chr17 61527781 61527853 -33744798 - L1M4 LINE L1 -5495 1047 977 2 1054 33844 76 8 3 chr17 61528364 61532942 -33739709 - L1Md_F2 LINE L1 -14 6568 1977 2 1054 180 77 0 0 chr17 61532942 61532968 -33739683 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2 1054 33844 141 17 19 chr17 61532968 61534734 -33737917 - L1Md_F2 LINE L1 -3907 1976 209 2 1054 977 249 84 47 chr17 61535410 61535599 -33737052 + ORR1D1 LTR MaLR 1 181 -193 2 1054 975 117 0 0 chr17 61535599 61535779 -33736872 + (TC)n Simple_repeat Simple_repeat 1 180 0 3 1054 977 249 84 47 chr17 61535779 61535948 -33736703 + ORR1D1 LTR MaLR 182 372 -2 2 1054 40 67 0 0 chr17 61536129 61536204 -33736447 + AT_rich Low_complexity Low_complexity 1 75 0 3 1054 228 125 0 53 chr17 61537952 61538028 -33734623 + (CAAA)n Simple_repeat Simple_repeat 2 73 0 3 1054 2477 265 99 29 chr17 61538283 61538794 -33733857 - Lx7 LINE L1 -981 6715 6196 3 1054 369 0 0 0 chr17 61538794 61538835 -33733816 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 1054 2477 265 99 29 chr17 61538835 61539185 -33733466 - Lx7 LINE L1 -1501 6195 5795 3 1054 21 0 0 0 chr17 61539216 61539237 -33733414 + AT_rich Low_complexity Low_complexity 1 21 0 3 1054 325 242 15 0 chr17 61539280 61539346 -33733305 + tRNA-Ala-GCY_ tRNA tRNA 1 67 -8 3 1054 943 293 61 22 chr17 61539391 61540028 -33732623 - L1MA6 LINE L1 -422 5878 5165 3 1054 452 298 89 21 chr17 61540100 61540391 -33732260 - L1MA6 LINE L1 -1083 5060 4750 3 1054 292 339 26 26 chr17 61540424 61540539 -33732112 - PB1D10 SINE Alu -2 115 1 3 1054 662 123 8 30 chr17 61541886 61542020 -33730631 + MusHAL1 LINE L1 2582 2712 0 3 1054 1082 60 0 0 chr17 61542460 61542594 -33730057 - B1_Mm SINE Alu -12 135 2 4 1054 3276 291 36 11 chr17 61542681 61543595 -33729056 - Lx5 LINE L1 -128 6922 5986 4 1054 201 308 15 15 chr17 61543959 61544025 -33728626 + MIR SINE MIR 78 143 -119 4 1054 24 0 0 0 chr17 61544228 61544252 -33728399 + AT_rich Low_complexity Low_complexity 1 24 0 4 1054 279 140 0 0 chr17 61544748 61544798 -33727853 + (T)n Simple_repeat Simple_repeat 1 50 0 4 1054 7263 18 0 7 chr17 61545042 61545870 -33726781 - RLTR13B2 LTR ERVK 0 822 1 4 1054 206 146 0 59 chr17 61546000 61546046 -33726605 + A-rich Low_complexity Low_complexity 3 45 0 4 1054 2610 80 33 53 chr17 61546046 61546443 -33726208 + L1_Mus2 LINE L1 6178 6566 0 4 1054 1221 136 0 0 chr17 61546460 61546644 -33726007 + MusHAL1 LINE L1 22 205 -3149 4 1054 11672 92 21 13 chr17 61546640 61548440 -33724211 + MusHAL1 LINE L1 1541 3353 0 4 1054 1119 82 7 0 chr17 61548446 61548592 -33724059 + B1_Mus2 SINE Alu 1 147 0 4 1054 212 122 60 20 chr17 61548592 61548642 -33724009 + (TAAA)n Simple_repeat Simple_repeat 3 54 0 5 1054 1323 303 37 21 chr17 61551433 61552060 -33720591 + L1_Mur3 LINE L1 1572 2208 -3672 5 1054 389 275 86 43 chr17 61552305 61552514 -33720137 + L1M2 LINE L1 3623 3840 -2303 5 1054 2149 129 6 6 chr17 61552533 61552860 -33719791 + ORR1A2 LTR MaLR 1 327 0 5 1054 6285 172 96 8 chr17 61552860 61554168 -33718483 + ORR1A2-int LTR MaLR 1 1422 -541 5 1054 1409 282 73 68 chr17 61554210 61555127 -33717524 + L1_Mur3 LINE L1 4102 5023 -857 5 1054 2057 154 78 75 chr17 61555147 61555512 -33717139 + L1_Mur2 LINE L1 3718 4118 -1759 5 1054 1036 119 17 0 chr17 61555512 61555688 -33716963 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 5 1054 2057 154 78 75 chr17 61555688 61555786 -33716865 + L1_Mur2 LINE L1 4119 4182 -1695 5 1054 4710 196 41 9 chr17 61555784 61556754 -33715897 + Lx3C LINE L1 5965 6965 -11 5 1054 1971 71 11 4 chr17 61556755 61557025 -33715626 + L1_Mus2 LINE L1 6293 6564 -2 5 1054 264 305 1 20 chr17 61558510 61558629 -33714022 + L1M2 LINE L1 5565 5682 -618 5 1054 1181 250 36 47 chr17 61558665 61559114 -33713537 + Lx9 LINE L1 7196 7639 -5 5 1054 362 286 68 68 chr17 61559143 61559409 -33713242 - MER67A LTR ERV1 -241 302 37 6 1054 1390 249 65 21 chr17 61561296 61561727 -33710924 - RLTR16 LTR ERVK -49 456 7 6 1054 369 0 0 0 chr17 61562696 61562737 -33709914 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 1054 869 75 0 124 chr17 61562737 61562890 -33709761 - L1_Mus2 LINE L1 -8 6558 6425 6 1054 973 195 76 0 chr17 61563148 61563358 -33709293 + URR1A DNA MER1_type 1 226 0 6 1054 345 24 0 0 chr17 61563730 61563772 -33708879 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1054 270 0 0 0 chr17 61563772 61563801 -33708850 + (GA)n Simple_repeat Simple_repeat 1 30 0 6 1054 25 51 0 0 chr17 61563885 61563924 -33708727 + AT_rich Low_complexity Low_complexity 1 39 0 6 1054 825 268 68 34 chr17 61564225 61564608 -33708043 + L1MA4A LINE L1 4560 4955 -1188 6 1054 2394 256 90 7 chr17 61564629 61565375 -33707276 + Lx9 LINE L1 6835 7642 -2 6 1054 306 272 26 75 chr17 61565454 61565786 -33706865 + L1_Mur3 LINE L1 5011 5342 -538 7 1054 266 270 54 73 chr17 61565960 61566291 -33706360 + L1MA4A LINE L1 5101 5424 -760 6 1054 258 169 46 0 chr17 61566317 61566382 -33706269 - Lx4A LINE L1 -378 6680 6613 7 1054 1493 226 24 63 chr17 61566356 61566734 -33705917 + Lx4A LINE L1 6685 7047 -11 7 1054 409 300 98 84 chr17 61566778 61567196 -33705455 + L1MA4A LINE L1 5483 5906 -397 6 1054 368 52 35 0 chr17 61567710 61567768 -33704883 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 7 1054 383 87 0 14 chr17 61569254 61569324 -33703327 + (CAGAGA)n Simple_repeat Simple_repeat 4 72 0 7 1054 327 273 60 33 chr17 61569665 61569847 -33702804 + L1_Rod LINE L1 4095 4281 -1566 7 1054 912 262 246 35 chr17 61569852 61570576 -33702075 + L1_Rod LINE L1 4968 5865 -15 7 1054 789 128 0 0 chr17 61570843 61570968 -33701683 + (TA)n Simple_repeat Simple_repeat 2 126 0 7 1054 762 175 0 0 chr17 61571084 61571227 -33701424 + CT-rich Low_complexity Low_complexity 2 144 0 7 1054 4139 242 43 28 chr17 61571227 61572161 -33700490 + Lx9 LINE L1 6432 7384 -260 7 1054 1050 108 0 13 chr17 61572161 61572298 -33700353 + B1_Mus1 SINE Alu 1 136 -12 7 1054 438 20 0 0 chr17 61572298 61572349 -33700302 + (TAAAA)n Simple_repeat Simple_repeat 2 52 0 7 1054 1050 108 0 13 chr17 61572349 61572361 -33700290 + B1_Mus1 SINE Alu 137 148 0 7 1054 4139 242 43 28 chr17 61572361 61572618 -33700033 + Lx9 LINE L1 7385 7641 -3 7 1054 1380 268 46 74 chr17 61573067 61573467 -33699184 - Lx7 LINE L1 -16 7680 7317 8 1054 582 41 0 0 chr17 61573467 61573540 -33699111 + (TC)n Simple_repeat Simple_repeat 2 74 0 8 1054 1380 264 49 77 chr17 61573540 61573736 -33698915 - Lx7 LINE L1 -380 7316 7123 8 1054 438 20 0 0 chr17 61574089 61574140 -33698511 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 1054 21 0 0 0 chr17 61574279 61574300 -33698351 + AT_rich Low_complexity Low_complexity 1 21 0 8 1054 5980 203 75 15 chr17 61574347 61575674 -33696977 - Lx5 LINE L1 0 7050 5645 8 1054 333 214 52 133 chr17 61576029 61576239 -33696412 + MER53 DNA hAT 1 193 0 8 1054 241 374 31 6 chr17 61576359 61576518 -33696133 + L2 LINE L2 2671 2833 -586 8 1054 23 33 0 0 chr17 61576551 61576581 -33696070 + AT_rich Low_complexity Low_complexity 1 30 0 8 1054 216 356 47 28 chr17 61576609 61576716 -33695935 + L2 LINE L2 2974 3082 -337 8 1054 930 229 5 28 chr17 61576901 61577117 -33695534 - URR1B DNA MER1_type -14 211 1 8 1054 3472 181 51 5 chr17 61577215 61577876 -33694775 - RLTR17 LTR ERVK 0 692 1 8 1054 760 105 7 7 chr17 61579874 61580018 -33692633 + (TG)n Simple_repeat Simple_repeat 1 144 0 9 1054 496 293 7 26 chr17 61582565 61582716 -33689935 + RSINE1 SINE B4 1 148 -17 9 1054 4035 108 22 8 chr17 61582905 61583501 -33689150 - Lx3A LINE L1 -10 6971 6368 9 1054 650 248 51 48 chr17 61583510 61583803 -33688848 - Lx7 LINE L1 -16 7680 7361 9 1054 1281 249 17 31 chr17 61583884 61584237 -33688414 - Lx7 LINE L1 -355 7341 6994 9 1054 1141 272 46 0 chr17 61584308 61584635 -33688016 + Lx6 LINE L1 6318 6659 -801 9 1054 251 183 62 31 chr17 61584664 61584760 -33687891 + (TTATA)n Simple_repeat Simple_repeat 1 99 0 9 1054 464 154 69 56 chr17 61584865 61585009 -33687642 - Lx9 LINE L1 -2 7642 7497 9 1054 210 267 17 0 chr17 61585018 61585078 -33687573 + (TATATG)n Simple_repeat Simple_repeat 4 64 0 9 1054 276 189 49 25 chr17 61585651 61585814 -33686837 + (TATATG)n Simple_repeat Simple_repeat 3 169 0 9 1054 22 35 0 0 chr17 61585937 61585966 -33686685 + AT_rich Low_complexity Low_complexity 1 29 0 9 1054 1164 255 126 43 chr17 61586026 61586535 -33686116 + Lx7 LINE L1 7146 7696 0 1 1054 465 19 0 0 chr17 61586836 61586890 -33685761 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1054 264 319 36 18 chr17 61586914 61587046 -33685605 - L1_Mm LINE L1 -1291 4589 4455 1 1054 255 125 0 0 chr17 61587131 61587171 -33685480 + (CAAT)n Simple_repeat Simple_repeat 4 43 0 1 1054 30 45 0 0 chr17 61587225 61587269 -33685382 + AT_rich Low_complexity Low_complexity 1 44 0 1 1054 1163 62 0 7 chr17 61587928 61588074 -33684577 - B1_Mus1 SINE Alu -2 146 2 1 1054 24 0 0 0 chr17 61588535 61588559 -33684092 + AT_rich Low_complexity Low_complexity 1 24 0 1 1054 261 98 0 0 chr17 61588839 61588880 -33683771 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1054 288 70 0 0 chr17 61588913 61588956 -33683695 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 1054 271 208 9 47 chr17 61589373 61589479 -33683172 + A-rich Low_complexity Low_complexity 3 104 0 1 1054 3169 44 87 14 chr17 61589489 61589928 -33682723 - IAPLTR2_Mm LTR ERVK 0 475 5 1 1054 603 51 0 0 chr17 61589928 61590007 -33682644 + (CA)n Simple_repeat Simple_repeat 1 79 0 1 1054 1993 281 48 16 chr17 61590014 61590660 -33681991 - Lx7 LINE L1 -391 7305 6639 1 1054 1176 220 79 57 chr17 61590657 61591076 -33681575 + Lx7 LINE L1 5664 6091 -1605 1 1054 22 35 0 0 chr17 61591230 61591259 -33681392 + AT_rich Low_complexity Low_complexity 1 29 0 1 1054 425 338 6 125 chr17 61591284 61591377 -33681274 - RSINE1 SINE B4 0 165 79 1 1054 839 116 0 125 chr17 61591377 61591545 -33681106 + L1_Mus2 LINE L1 6420 6566 0 1 1054 425 338 6 125 chr17 61591545 61591627 -33681024 - RSINE1 SINE B4 -87 78 11 1 1054 23 0 0 0 chr17 61592271 61592294 -33680357 + AT_rich Low_complexity Low_complexity 1 23 0 1 1054 338 265 136 8 chr17 61593447 61593565 -33679086 + B1F SINE Alu 1 133 -16 1 1054 212 0 36 0 chr17 61593577 61593605 -33679046 + (CAAAAA)n Simple_repeat Simple_repeat 1 29 0 1 1054 669 261 68 57 chr17 61593897 61594145 -33678506 + Lx9 LINE L1 7215 7465 -179 1 1054 272 279 35 80 chr17 61594149 61594262 -33678389 - RMER12 LTR ERVK -466 856 749 1 1054 279 245 40 20 chr17 61594262 61594362 -33678289 + Lx9 LINE L1 7543 7644 0 1 1054 211 216 0 0 chr17 61594465 61594516 -33678135 + A-rich Low_complexity Low_complexity 1 51 0 1 1054 2960 114 5 9 chr17 61596008 61596452 -33676199 + L1_Mus3 LINE L1 6197 6638 0 1 1054 218 214 11 0 chr17 61596656 61596745 -33675906 + CT-rich Low_complexity Low_complexity 2 91 0 1 1054 809 300 46 56 chr17 61597042 61597437 -33675214 - MER82 DNA MER2_type -261 392 2 1 1054 22 35 0 0 chr17 61597437 61597466 -33675185 + AT_rich Low_complexity Low_complexity 1 29 0 1 1054 1995 98 42 0 chr17 61597602 61597889 -33674762 - Lx3_Mus LINE L1 -70 5816 5518 1 1054 4050 108 66 8 chr17 61597885 61597996 -33674655 + Lx3_Mus LINE L1 5795 5905 -1104 1 1054 183 42 0 0 chr17 61597996 61598020 -33674631 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1054 4050 108 66 8 chr17 61598020 61598579 -33674072 + Lx3_Mus LINE L1 5906 6504 -505 1 1054 366 322 33 8 chr17 61599256 61599378 -33673273 - B1F SINE Alu -23 126 2 1 1054 671 62 0 10 chr17 61599670 61599768 -33672883 + (TTTC)n Simple_repeat Simple_repeat 2 98 0 1 1054 1769 91 8 4 chr17 61599771 61600024 -33672627 - L1_Mus2 LINE L1 -6 6560 6307 1 1054 29 28 0 0 chr17 61601597 61601633 -33671018 + AT_rich Low_complexity Low_complexity 1 36 0 1 1054 1857 183 145 79 chr17 61601633 61602280 -33670371 - RMER6C LTR ERVK 0 690 1 1 1054 510 17 0 0 chr17 61602369 61602428 -33670223 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 1055 180 321 12 24 chr17 61605324 61605407 -33667244 - L2 LINE L2 -1030 2389 2308 1 1055 314 290 42 31 chr17 61606158 61606296 -33666355 + MIR SINE MIR 23 166 -102 1 1055 26 74 0 0 chr17 61606351 61606405 -33666246 + AT_rich Low_complexity Low_complexity 1 54 0 1 1055 612 238 60 60 chr17 61606455 61606638 -33666013 - B3 SINE B2 -11 205 23 1 1055 235 375 44 18 chr17 61606663 61606777 -33665874 - PB1D10 SINE Alu 0 117 1 1 1055 198 0 0 0 chr17 61608371 61608393 -33664258 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 1 1055 208 259 0 0 chr17 61608558 61608612 -33664039 + A-rich Low_complexity Low_complexity 1 54 0 1 1055 489 34 0 0 chr17 61608662 61608721 -33663930 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 1055 29 28 0 0 chr17 61608756 61608792 -33663859 + AT_rich Low_complexity Low_complexity 1 36 0 1 1055 1136 287 44 13 chr17 61609065 61609450 -33663201 - Lx9 LINE L1 -179 7465 7069 1 1055 356 185 45 61 chr17 61609442 61609574 -33663077 + Lx9 LINE L1 7503 7632 -12 1 1055 1598 168 43 40 chr17 61611632 61611960 -33660691 - ORR1A4 LTR MaLR 0 329 1 1 1055 227 54 0 26 chr17 61612169 61612207 -33660444 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 1 1055 465 66 0 0 chr17 61612655 61612716 -33659935 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 1055 1366 194 103 7 chr17 61612821 61613112 -33659539 - Lx5 LINE L1 0 7050 6732 1 1055 1447 175 72 52 chr17 61613112 61613551 -33659100 + RMER17C LTR ERVK 16 437 -521 1 1055 808 210 16 32 chr17 61613561 61613745 -33658906 + RLTR25A LTR ERVK 3 183 -845 1 1055 2667 49 12 0 chr17 61613745 61614091 -33658560 + RLTR1 LTR ERV1 1 350 -274 1 1055 19817 254 29 24 chr17 61614091 61620200 -33652451 + MMERGLN-int LTR ERV1 626 7032 -524 1 1055 2711 51 43 0 chr17 61620200 61620552 -33652099 - L1Md_F3 LINE L1 -1 6583 6217 1 1055 3344 300 69 60 chr17 61620552 61621054 -33651597 + MMERGLN-int LTR ERV1 7033 7555 -1 1 1055 3065 148 11 5 chr17 61621054 61621581 -33651070 + RLTR1 LTR ERV1 1 624 0 1 1055 3451 177 26 30 chr17 61621587 61622280 -33650371 + RLTR25A LTR ERVK 158 847 -256 1 1055 451 202 128 8 chr17 61622275 61622400 -33650251 + RLTR25A LTR ERVK 962 1101 -2 1 1055 1943 183 18 0 chr17 61622400 61622733 -33649918 - Lx5 LINE L1 -315 6735 6397 1 1055 2683 166 66 34 chr17 61622747 61623372 -33649279 - Lx5 LINE L1 -866 6184 5530 1 1055 211 184 0 39 chr17 61623668 61623719 -33648932 + T-rich Low_complexity Low_complexity 1 49 0 1 1055 287 25 25 0 chr17 61623989 61624029 -33648622 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 1 1055 1062 70 21 0 chr17 61624044 61624186 -33648465 - B1_Mm SINE Alu 0 147 3 1 1055 1821 253 60 45 chr17 61624310 61624709 -33647942 - MT2A LTR ERVL -12 521 111 1 1055 4029 120 2 7 chr17 61624709 61625296 -33647355 + MT2B2 LTR ERVL 1 584 0 1 1055 1821 253 60 45 chr17 61625296 61625409 -33647242 - MT2A LTR ERVL -423 110 1 1 1055 388 282 59 0 chr17 61625642 61625811 -33646840 - Lx8 LINE L1 -1568 5905 5723 1 1055 1524 306 179 28 chr17 61625818 61626034 -33646617 + Lx8 LINE L1 6358 6623 -850 1 1055 2117 200 64 82 chr17 61626034 61626737 -33645914 + RMER6C LTR ERVK 1 690 0 1 1055 1524 306 179 28 chr17 61626737 61627368 -33645283 + Lx8 LINE L1 6624 7333 -140 1 1055 410 301 8 8 chr17 61627555 61627679 -33644972 + Lx7 LINE L1 7554 7677 -19 1 1055 275 348 148 35 chr17 61628040 61628781 -33643870 + BLACKJACK DNA AcHobo 767 1591 -1353 1 1055 399 74 12 92 chr17 61628906 61629156 -33643495 + GA-rich Low_complexity Low_complexity 1 229 0 1 1055 275 136 0 22 chr17 61629156 61629174 -33643477 + polypurine Low_complexity Low_complexity 1 18 0 1 1055 1431 50 0 0 chr17 61629174 61629354 -33643297 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 1055 275 136 0 22 chr17 61629354 61629380 -33643271 + polypurine Low_complexity Low_complexity 19 44 0 1 1055 594 307 34 11 chr17 61629568 61629746 -33642905 - ORR1E LTR MaLR -177 182 1 1 1055 26 0 0 0 chr17 61630489 61630515 -33642136 + AT_rich Low_complexity Low_complexity 1 26 0 1 1055 22 35 0 0 chr17 61630888 61630917 -33641734 + AT_rich Low_complexity Low_complexity 1 29 0 1 1055 250 319 105 70 chr17 61631464 61631750 -33640901 - MLT1C LTR MaLR -21 446 151 1 1055 558 0 0 0 chr17 61632237 61632299 -33640352 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 1055 637 214 13 33 chr17 61632309 61632459 -33640192 - Lx4B LINE L1 -40 7018 6872 1 1055 716 320 18 50 chr17 61632957 61633240 -33639411 + Lx7 LINE L1 7027 7300 -396 1 1055 209 179 17 51 chr17 61633248 61633307 -33639344 + T-rich Low_complexity Low_complexity 3 59 0 1 1055 26 0 0 0 chr17 61633392 61633418 -33639233 + AT_rich Low_complexity Low_complexity 1 26 0 1 1055 27 29 0 0 chr17 61633553 61633587 -33639064 + AT_rich Low_complexity Low_complexity 1 34 0 1 1055 25 31 0 0 chr17 61633898 61633930 -33638721 + AT_rich Low_complexity Low_complexity 1 32 0 1 1055 505 326 5 62 chr17 61635511 61635704 -33636947 + B3A SINE B2 1 182 -16 1 1055 444 156 10 20 chr17 61635705 61635803 -33636848 + RMER3D-int LTR ERVK 2746 2842 0 1 1055 3595 184 12 30 chr17 61635814 61636505 -33636146 + RLTR17 LTR ERVK 15 692 0 1 1055 400 277 43 13 chr17 61636845 61636976 -33635675 + B3A SINE B2 2 132 -63 1 1055 450 0 0 0 chr17 61636977 61637027 -33635624 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1055 729 80 0 10 chr17 61637225 61637326 -33635325 + MT-int LTR MaLR 247 346 -752 1 1055 25 31 0 0 chr17 61638677 61638709 -33633942 + AT_rich Low_complexity Low_complexity 1 32 0 1 1055 2688 121 19 0 chr17 61638712 61639183 -33633468 - Lx2A1 LINE L1 -1020 5988 5503 1 1055 3283 162 47 19 chr17 61639183 61639800 -33632851 + Lx2B LINE L1 6363 6996 -4 1 1055 425 34 17 0 chr17 61639913 61639972 -33632679 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 1055 1276 288 130 18 chr17 61639972 61640520 -33632131 - Lx7 LINE L1 -285 7411 6803 1 1055 3357 275 43 10 chr17 61640529 61641496 -33631155 + Lx7 LINE L1 5794 6792 -904 1 1055 21 0 0 0 chr17 61641834 61641855 -33630796 + AT_rich Low_complexity Low_complexity 1 21 0 1 1055 699 241 0 0 chr17 61642414 61642551 -33630100 + B1_Mus2 SINE Alu 1 137 -10 1 1055 214 211 19 0 chr17 61643015 61643067 -33629584 + (CATATA)n Simple_repeat Simple_repeat 3 55 0 1 1055 269 70 47 0 chr17 61643817 61643860 -33628791 + (TTTC)n Simple_repeat Simple_repeat 3 47 0 1 1055 776 296 74 55 chr17 61644384 61644684 -33627967 + ORR1D2 LTR MaLR 40 354 -16 1 1055 1631 68 62 12 chr17 61644684 61644924 -33627727 + L1_Mus2 LINE L1 6315 6566 0 1 1055 776 296 74 55 chr17 61644924 61644948 -33627703 + ORR1D2 LTR MaLR 355 370 0 1 1055 26 64 0 0 chr17 61644968 61645015 -33627636 + AT_rich Low_complexity Low_complexity 1 47 0 1 1055 1096 97 102 6 chr17 61645280 61645457 -33627194 - B2_Mm2 SINE B2 0 195 2 1 1055 488 233 7 0 chr17 61645474 61645620 -33627031 + CT-rich Low_complexity Low_complexity 2 148 0 1 1055 795 116 33 0 chr17 61645620 61645741 -33626910 - B1_Mus1 SINE Alu -21 127 3 1 1055 424 206 0 97 chr17 61645641 61645754 -33626897 - MT2B LTR ERVL -345 256 155 2 1055 275 267 59 10 chr17 61646382 61646484 -33626167 + RMER15 LTR ERVL 374 480 -95 2 1055 292 78 64 13 chr17 61646501 61646579 -33626072 + T-rich Low_complexity Low_complexity 2 83 0 2 1055 396 0 0 0 chr17 61646782 61646826 -33625825 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1055 234 0 0 0 chr17 61648006 61648032 -33624619 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 1055 21 36 0 0 chr17 61648495 61648523 -33624128 + AT_rich Low_complexity Low_complexity 1 28 0 2 1055 192 77 0 0 chr17 61648703 61648729 -33623922 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 1055 231 36 0 0 chr17 61648849 61648877 -33623774 + (GA)n Simple_repeat Simple_repeat 2 29 0 2 1055 372 155 0 0 chr17 61649107 61649178 -33623473 + (TG)n Simple_repeat Simple_repeat 1 71 0 2 1055 1112 164 12 1 chr17 61649178 61649390 -33623261 - Lx3B LINE L1 -1032 5941 5754 2 1055 278 215 10 31 chr17 61649404 61649500 -33623151 + (TA)n Simple_repeat Simple_repeat 1 94 0 2 1055 258 81 0 0 chr17 61649593 61649630 -33623021 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 1055 920 314 127 64 chr17 61649943 61650582 -33622069 + MLT1I-int LTR MaLR 526 1204 -205 2 1055 248 53 26 0 chr17 61650781 61650819 -33621832 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 1055 365 0 22 0 chr17 61650976 61651021 -33621630 + (TTTTG)n Simple_repeat Simple_repeat 5 50 0 2 1055 264 59 0 0 chr17 61651168 61651202 -33621449 + (CAT)n Simple_repeat Simple_repeat 2 35 0 2 1055 225 299 55 18 chr17 61651262 61651371 -33621280 + RLTR13D5 LTR ERVK 186 298 -725 2 1055 329 339 67 65 chr17 61651645 61652004 -33620647 - MLT1H-int LTR MaLR -974 435 25 2 1055 408 336 132 32 chr17 61652798 61653078 -33619573 + MLT1I LTR MaLR 101 408 -3 2 1055 26 0 0 0 chr17 61653461 61653487 -33619164 + AT_rich Low_complexity Low_complexity 1 26 0 2 1055 474 125 0 0 chr17 61655060 61655140 -33617511 + (TG)n Simple_repeat Simple_repeat 1 80 0 2 1055 2780 186 23 4 chr17 61655170 61655651 -33617000 + RMER13A LTR ERVK 83 572 -288 2 1055 784 200 42 19 chr17 61655702 61655892 -33616759 + RLTR20B2 LTR ERVK 377 557 -3 2 1055 450 0 0 0 chr17 61655894 61655944 -33616707 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1055 687 25 0 0 chr17 61655944 61656025 -33616626 + (TA)n Simple_repeat Simple_repeat 1 81 0 2 1055 24 32 0 0 chr17 61656452 61656483 -33616168 + AT_rich Low_complexity Low_complexity 1 31 0 2 1055 207 100 0 0 chr17 61657186 61657216 -33615435 + (T)n Simple_repeat Simple_repeat 1 30 0 2 1055 2644 32 0 0 chr17 61657260 61657574 -33615077 - L1Md_T LINE L1 -2 6580 6267 2 1055 5545 28 1 0 chr17 61657574 61658222 -33614429 + L1Md_T LINE L1 5605 6253 -329 2 1055 2042 79 0 7 chr17 61658868 61659150 -33613501 - L1_Mus2 LINE L1 -1 6565 6286 2 1055 395 332 103 45 chr17 61659157 61659516 -33613135 - MLT-int LTR MaLR -108 1627 1248 2 1055 337 269 26 44 chr17 61659738 61659851 -33612800 - MLT1A1 LTR MaLR -295 113 3 2 1055 327 78 0 0 chr17 61659906 61659957 -33612694 + (TCTG)n Simple_repeat Simple_repeat 4 54 0 2 1055 3080 106 2 33 chr17 61659958 61660438 -33612213 - Lx3A LINE L1 -3 6978 6514 2 1055 1426 75 5 0 chr17 61660438 61660626 -33612025 + Lx3_Mus LINE L1 6350 6538 -471 2 1055 428 319 68 40 chr17 61660626 61660877 -33611774 - MLT1A1-int LTR MaLR -738 633 376 2 1055 270 0 0 0 chr17 61661511 61661541 -33611110 + (TA)n Simple_repeat Simple_repeat 1 30 0 2 1055 630 285 90 133 chr17 61661962 61662426 -33610225 + RLTR11A2 LTR ERVK 3 465 -63 2 1055 757 181 65 0 chr17 61662637 61662775 -33609876 + RMER6C LTR ERVK 19 165 -525 2 1055 952 193 117 21 chr17 61662768 61663049 -33609602 + RMER6C LTR ERVK 381 688 -2 2 1055 214 162 0 0 chr17 61663051 61663088 -33609563 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1055 645 80 0 0 chr17 61663104 61663192 -33609459 + (TA)n Simple_repeat Simple_repeat 2 89 0 2 1055 366 327 124 16 chr17 61663192 61663441 -33609210 - B4A SINE B4 -15 277 2 2 1055 486 0 0 0 chr17 61663916 61663970 -33608681 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 1055 633 58 0 0 chr17 61664723 61664809 -33607842 + (TG)n Simple_repeat Simple_repeat 1 86 0 2 1055 214 233 11 11 chr17 61664809 61664896 -33607755 + GA-rich Low_complexity Low_complexity 2 88 0 2 1055 263 270 58 75 chr17 61665861 61665889 -33606762 + ID_B1 SINE B4 107 224 0 2 1055 323 233 22 65 chr17 61665889 61665981 -33606670 + PB1D9 SINE Alu 33 120 0 2 1055 213 239 0 29 chr17 61666035 61666104 -33606547 + A-rich Low_complexity Low_complexity 3 69 0 2 1055 266 274 23 45 chr17 61666115 61666203 -33606448 + B2_Mm2 SINE B2 6 91 -104 2 1055 49 18 0 0 chr17 61666203 61666259 -33606392 + AT_rich Low_complexity Low_complexity 1 56 0 2 1055 6967 98 26 48 chr17 61666265 61667421 -33605230 - Lx3_Mus LINE L1 -12 6997 5867 2 1055 2683 40 0 0 chr17 61667431 61667757 -33604894 + IAPEY2_LTR LTR ERVK 32 357 0 2 1055 2144 94 0 0 chr17 61667757 61668043 -33604608 - Lx3_Mus LINE L1 -1137 5872 5587 2 1055 3542 166 145 42 chr17 61668051 61669398 -33603253 - L1_Mur1 LINE L1 -4106 1780 230 2 1055 2757 54 0 0 chr17 61669398 61669730 -33602921 + IAPEY3_LTR LTR ERVK 1 332 0 2 1055 2974 202 140 74 chr17 61669730 61670004 -33602647 - L1_Mur1 LINE L1 -6755 229 3 2 1055 262 303 0 0 chr17 61670018 61670084 -33602567 + B3A SINE B2 82 147 -51 2 1055 251 0 0 56 chr17 61670241 61670277 -33602374 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 2 1055 1099 144 85 0 chr17 61670297 61670498 -33602153 + Lx3A LINE L1 6754 6971 -10 2 1055 215 31 31 0 chr17 61670505 61670537 -33602114 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 2 1055 586 264 149 0 chr17 61671553 61671727 -33600924 - B3 SINE B2 -16 200 1 2 1055 29 108 0 0 chr17 61672485 61672605 -33600046 + AT_rich Low_complexity Low_complexity 1 120 0 2 1055 521 326 102 4 chr17 61672720 61672945 -33599706 - Lx8 LINE L1 -372 7101 6855 2 1055 2472 51 3 0 chr17 61673057 61673373 -33599278 - MTA_Mm LTR MaLR -79 317 1 2 1055 270 56 0 0 chr17 61673397 61673433 -33599218 + (CAAA)n Simple_repeat Simple_repeat 3 38 0 2 1055 28 0 0 0 chr17 61675442 61675470 -33597181 + AT_rich Low_complexity Low_complexity 1 28 0 2 1055 6536 43 1 1 chr17 61675611 61676406 -33596245 - L1Md_F2 LINE L1 -14 6568 5774 2 1055 298 307 19 29 chr17 61676627 61676731 -33595920 + MTEa LTR MaLR 276 378 -1 2 1055 21 0 0 0 chr17 61677348 61677369 -33595282 + AT_rich Low_complexity Low_complexity 1 21 0 2 1055 1536 20 0 0 chr17 61677758 61678013 -33594638 + (TTC)n Simple_repeat Simple_repeat 1 255 0 2 1055 564 140 0 0 chr17 61678013 61678106 -33594545 + (TCC)n Simple_repeat Simple_repeat 2 94 0 2 1055 2973 145 16 6 chr17 61678112 61678611 -33594040 - Lx3B LINE L1 -5 6968 6465 2 1055 4130 94 40 7 chr17 61678617 61679214 -33593437 + L1_Mur1 LINE L1 5147 5763 -123 2 1055 1253 315 87 17 chr17 61679387 61680288 -33592363 - L1_Mur3 LINE L1 -2980 2900 1937 2 1055 451 324 173 0 chr17 61680307 61680492 -33592159 - ID_B1 SINE B4 0 224 8 2 1055 1082 73 0 0 chr17 61680824 61680960 -33591691 - B1_Mus2 SINE Alu -10 137 2 2 1055 1124 25 73 30 chr17 61680965 61681147 -33591504 - L1Md_F2 LINE L1 0 6582 6412 2 1055 219 132 0 0 chr17 61681147 61681166 -33591485 + (T)n Simple_repeat Simple_repeat 1 19 0 2 1055 647 77 0 0 chr17 61681190 61681281 -33591370 + B1_Mm SINE Alu 1 91 -56 2 1055 281 260 130 22 chr17 61681776 61681961 -33590690 - L1MA6 LINE L1 -4 6296 6092 2 1055 683 307 5 10 chr17 61682203 61682397 -33590254 - B3 SINE B2 -21 195 3 2 1055 687 361 64 16 chr17 61682805 61683193 -33589458 + Lx8 LINE L1 6718 7124 -349 2 1055 279 0 0 0 chr17 61683710 61683741 -33588910 + (TA)n Simple_repeat Simple_repeat 2 32 0 2 1055 240 35 0 0 chr17 61685139 61685168 -33587483 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1055 1601 114 45 0 chr17 61685573 61685818 -33586833 + Lx3_Mus LINE L1 6738 6993 -16 2 1055 336 363 138 11 chr17 61686250 61686431 -33586220 - B3 SINE B2 0 216 13 2 1055 2845 95 50 0 chr17 61686498 61686921 -33585730 - L1_Mus3 LINE L1 -7 6631 6188 2 1055 302 318 20 108 chr17 61687105 61687253 -33585398 + B3 SINE B2 82 216 0 2 1055 4554 105 23 1 chr17 61687388 61688046 -33584605 - Lx3_Mus LINE L1 -8 7001 6330 2 1055 380 263 31 21 chr17 61688768 61688865 -33583786 + PB1D9 SINE Alu 23 120 0 2 1055 495 0 0 0 chr17 61688900 61688955 -33583696 + (TTA)n Simple_repeat Simple_repeat 2 56 0 2 1055 419 263 85 45 chr17 61689818 61690017 -33582634 + RLTR12B LTR ERVK 303 509 -19 2 1055 23 92 0 0 chr17 61690018 61690083 -33582568 + AT_rich Low_complexity Low_complexity 1 65 0 2 1055 26 0 0 0 chr17 61690889 61690915 -33581736 + AT_rich Low_complexity Low_complexity 1 26 0 2 1055 245 342 72 0 chr17 61691388 61691499 -33581152 + LTR52 LTR ERVL 8 126 -295 2 1055 1014 132 0 0 chr17 61691879 61692045 -33580606 - Lx2 LINE L1 0 6997 6832 2 1055 795 214 19 6 chr17 61692045 61692205 -33580446 + Lx2 LINE L1 6536 6697 -300 2 1055 1418 75 0 0 chr17 61693781 61693968 -33578683 + L1_Mus1 LINE L1 6381 6567 0 2 1055 342 0 0 0 chr17 61694888 61694926 -33577725 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1055 268 98 32 16 chr17 61694934 61694996 -33577655 + (CAGAGA)n Simple_repeat Simple_repeat 4 66 0 2 1055 633 27 0 0 chr17 61694998 61695073 -33577578 + (GGAA)n Simple_repeat Simple_repeat 2 76 0 2 1055 486 0 0 0 chr17 61695348 61695402 -33577249 + (TC)n Simple_repeat Simple_repeat 2 55 0 2 1055 441 0 0 0 chr17 61695402 61695450 -33577201 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1055 1977 128 12 6 chr17 61696204 61696526 -33576125 - L1_Mus3 LINE L1 -4 6634 6311 2 1055 243 0 0 0 chr17 61696537 61696564 -33576087 + (TTA)n Simple_repeat Simple_repeat 1 27 0 2 1055 4439 120 37 18 chr17 61696564 61697258 -33575393 - L1Md_F2 LINE L1 -22 6560 5854 3 1055 4192 48 6 0 chr17 61697258 61697774 -33574877 + L1_Mm LINE L1 5165 5683 -200 3 1055 1727 102 31 0 chr17 61697776 61698031 -33574620 - L1_Mus3 LINE L1 -318 6320 6058 2 1055 447 113 0 0 chr17 61698095 61698166 -33574485 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 1055 247 258 31 31 chr17 61700082 61700178 -33572473 - Lx6 LINE L1 -17 7443 7348 3 1055 24 53 0 0 chr17 61701071 61701109 -33571542 + AT_rich Low_complexity Low_complexity 1 38 0 3 1055 6050 67 1 0 chr17 61701285 61702051 -33570600 + L1_Mus1 LINE L1 5794 6560 -7 3 1055 257 51 0 25 chr17 61702051 61702091 -33570560 + (TTAA)n Simple_repeat Simple_repeat 1 39 0 3 1055 339 25 0 0 chr17 61702801 61702841 -33569810 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1055 1241 272 8 22 chr17 61703540 61703905 -33568746 - RCHARR1 DNA MER1_type -17 957 598 3 1055 4970 113 46 1 chr17 61703905 61704672 -33567979 - L1_Mur2 LINE L1 -243 5634 4834 3 1055 3417 184 62 3 chr17 61704671 61705320 -33567331 + Lx4A LINE L1 6369 7055 -3 3 1055 377 231 162 42 chr17 61705342 61705509 -33567142 - RCHARR1 DNA MER1_type -366 608 422 3 1055 295 209 99 9 chr17 61705578 61705689 -33566962 - RCHARR1 DNA MER1_type -527 447 327 3 1055 244 295 45 45 chr17 61705706 61705816 -33566835 - L1_Mur3 LINE L1 -6895 817 708 3 1055 722 256 40 22 chr17 61705822 61706046 -33566605 + Lx7 LINE L1 7155 7382 -314 3 1055 348 24 0 0 chr17 61706097 61706138 -33566513 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1055 1626 137 8 15 chr17 61706193 61706453 -33566198 + Lx2B LINE L1 5637 5894 -1106 3 1055 1145 50 0 0 chr17 61706951 61707090 -33565561 + B1_Mus1 SINE Alu 1 139 -9 3 1055 387 0 0 0 chr17 61707090 61707133 -33565518 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 1055 198 0 0 0 chr17 61707335 61707357 -33565294 + (CA)n Simple_repeat Simple_repeat 1 22 0 3 1055 300 282 120 38 chr17 61707513 61707697 -33564954 - L1M3 LINE L1 -1399 4744 4546 3 1055 304 361 9 0 chr17 61707745 61707853 -33564798 - B4 SINE B4 -4 288 180 3 1055 909 90 0 0 chr17 61707954 61708076 -33564575 + B1_Mus1 SINE Alu 2 123 -25 3 1055 1102 292 37 6 chr17 61708074 61708425 -33564226 + MTD LTR MaLR 55 416 -3 3 1055 357 304 112 41 chr17 61708615 61709153 -33563498 - L1M3 LINE L1 -1801 4339 3764 3 1055 548 245 26 5 chr17 61709204 61709397 -33563254 - Lx9 LINE L1 -16 7628 7432 3 1055 312 247 0 25 chr17 61709430 61709509 -33563142 - Lx9 LINE L1 -301 7343 7267 3 1055 341 370 88 33 chr17 61709611 61709974 -33562677 + LTR40b LTR ERVL 80 462 0 3 1055 336 284 86 26 chr17 61709987 61710139 -33562512 + HERVL40-int LTR ERVL 16 176 -5354 3 1055 328 347 25 0 chr17 61710443 61710564 -33562087 + HERVL40-int LTR ERVL 415 538 -4992 3 1055 422 336 29 71 chr17 61710659 61710899 -33561752 + HERVL40-int LTR ERVL 597 826 -4704 3 1055 222 37 0 0 chr17 61711164 61711191 -33561460 + (TAAAA)n Simple_repeat Simple_repeat 3 29 0 3 1055 510 139 25 0 chr17 61711862 61711941 -33560710 + MTC LTR MaLR 1 81 -340 3 1055 3941 136 146 10 chr17 61711941 61712641 -33560010 + Lx LINE L1 5853 6647 -7 3 1055 764 201 0 11 chr17 61712650 61712826 -33559825 + A-rich Low_complexity Low_complexity 2 175 0 3 1055 1156 225 120 0 chr17 61712826 61713084 -33559567 + MTC LTR MaLR 68 356 -65 3 1055 458 347 17 68 chr17 61713731 61713966 -33558685 + RMER15 LTR ERVL 243 465 -110 3 1055 544 309 0 0 chr17 61714048 61714187 -33558464 + B3 SINE B2 5 143 -73 3 1055 278 238 32 0 chr17 61714993 61715056 -33557595 + CT-rich Low_complexity Low_complexity 3 67 0 3 1055 5984 47 7 0 chr17 61716120 61716861 -33555790 + L1Md_F2 LINE L1 5834 6579 -3 3 1055 1004 312 70 30 chr17 61717141 61717602 -33555049 - Lx6 LINE L1 -185 7275 6455 3 1055 251 268 0 0 chr17 61717659 61717715 -33554936 - Lx6 LINE L1 -603 6447 6392 3 1055 25 51 0 0 chr17 61717859 61717898 -33554753 + AT_rich Low_complexity Low_complexity 1 39 0 3 1055 1163 327 100 71 chr17 61718080 61719006 -33553645 - Lx8 LINE L1 -6 7467 6515 3 1055 22 0 0 0 chr17 61720246 61720268 -33552383 + AT_rich Low_complexity Low_complexity 1 22 0 3 1055 495 33 0 0 chr17 61720509 61720570 -33552081 + (GA)n Simple_repeat Simple_repeat 2 62 0 3 1055 1276 209 90 63 chr17 61720807 61721098 -33551553 + RLTR40 LTR ERVK 1 287 -530 3 1055 189 74 0 0 chr17 61721098 61721125 -33551526 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1055 1276 209 90 63 chr17 61721125 61721246 -33551405 + RLTR40 LTR ERVK 288 423 -394 3 1055 4361 72 0 0 chr17 61721276 61721829 -33550822 + L1_Mus2 LINE L1 5972 6524 -42 3 1055 5174 111 33 4 chr17 61721832 61722617 -33550034 - RLTR13C2 LTR ERVK 0 808 1 3 1055 283 70 0 0 chr17 61722617 61722660 -33549991 + L1_Mus2 LINE L1 6523 6565 -1 3 1055 605 144 0 0 chr17 61722695 61722785 -33549866 + Lx3B LINE L1 6318 6407 -569 3 1055 2368 154 53 2 chr17 61722793 61723209 -33549442 + Lx3B LINE L1 6537 6973 0 3 1055 276 161 0 0 chr17 61723209 61723271 -33549380 + A-rich Low_complexity Low_complexity 1 62 0 3 1055 818 256 93 29 chr17 61723274 61723552 -33549099 + RLTR40 LTR ERVK 496 791 -26 3 1055 336 83 0 0 chr17 61723916 61723964 -33548687 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1055 315 0 0 0 chr17 61723964 61723998 -33548653 + (GA)n Simple_repeat Simple_repeat 2 36 0 3 1055 30 0 0 0 chr17 61724182 61724212 -33548439 + AT_rich Low_complexity Low_complexity 1 30 0 3 1055 500 338 35 7 chr17 61727507 61727804 -33544847 + L1MA6 LINE L1 5715 6017 -283 3 1055 488 397 30 40 chr17 61727835 61728134 -33544517 - ORR1E LTR MaLR -61 298 3 3 1055 4925 261 112 14 chr17 61729381 61730724 -33541927 + Lx6 LINE L1 5983 7456 -4 3 1055 242 312 25 38 chr17 61732487 61732567 -33540084 + B3A SINE B2 1 79 -119 3 1055 423 0 0 0 chr17 61732802 61732849 -33539802 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1055 21 0 0 0 chr17 61732942 61732963 -33539688 + AT_rich Low_complexity Low_complexity 1 21 0 3 1055 29 70 0 0 chr17 61733813 61733870 -33538781 + AT_rich Low_complexity Low_complexity 1 57 0 3 1055 552 15 0 0 chr17 61734656 61734721 -33537930 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 131 10370 144 36 25 chr17 61734853 61737828 -33534823 + Lx4A LINE L1 4036 7055 -3 3 1056 492 59 0 0 chr17 61738311 61738379 -33534272 + (TTTTG)n Simple_repeat Simple_repeat 3 70 0 3 1056 4504 157 9 10 chr17 61738379 61739173 -33533478 - Lx3B LINE L1 -11 6962 6170 3 1056 3481 124 11 11 chr17 61739173 61739729 -33532922 + Lx3C LINE L1 5600 6155 -821 3 1056 594 41 0 0 chr17 61740300 61740373 -33532278 + (TA)n Simple_repeat Simple_repeat 2 74 0 3 1056 267 346 0 0 chr17 61740460 61740474 -33532177 + ID SINE ID 68 81 -143 3 1056 298 315 28 0 chr17 61740474 61740582 -33532069 + PB1D10 SINE Alu 1 111 -6 3 1056 444 82 0 0 chr17 61740586 61740647 -33532004 + (GA)n Simple_repeat Simple_repeat 1 61 0 3 1056 280 208 21 0 chr17 61740674 61740770 -33531881 + GA-rich Low_complexity Low_complexity 1 98 0 3 1056 25 65 0 0 chr17 61741263 61741309 -33531342 + AT_rich Low_complexity Low_complexity 1 46 0 3 1056 4033 54 76 8 chr17 61741371 61741895 -33530756 - LTRIS2 LTR ERV1 0 564 5 3 1056 7297 103 16 0 chr17 61742382 61743499 -33529152 - L1_Mus4 LINE L1 -2 6634 5486 3 1056 1345 168 4 4 chr17 61743498 61743749 -33528902 + L1_Mur2 LINE L1 5160 5410 -467 3 1056 519 326 44 36 chr17 61747049 61747297 -33525354 - MLT1D LTR MaLR -1 504 255 3 1056 486 0 0 0 chr17 61747481 61747535 -33525116 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1056 696 164 0 0 chr17 61747535 61747669 -33524982 + (TA)n Simple_repeat Simple_repeat 1 134 0 3 1056 233 173 8 68 chr17 61748938 61749056 -33523595 + (TATAA)n Simple_repeat Simple_repeat 5 115 0 3 1056 22 35 0 0 chr17 61749077 61749106 -33523545 + AT_rich Low_complexity Low_complexity 1 29 0 3 1056 297 223 12 18 chr17 61749715 61749874 -33522777 + GA-rich Low_complexity Low_complexity 1 158 0 3 1056 329 234 9 9 chr17 61749951 61750059 -33522592 - Lx9 LINE L1 -2 7642 7535 3 1056 396 0 0 0 chr17 61750099 61750143 -33522508 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1056 241 290 75 101 chr17 61751274 61751462 -33521189 + MARNA DNA Mariner 75 257 -329 3 1056 203 146 0 24 chr17 61751972 61752014 -33520637 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 3 1056 207 0 0 0 chr17 61752218 61752241 -33520410 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1056 1039 88 0 0 chr17 61752251 61752410 -33520241 - L1_Mus4 LINE L1 0 6636 6478 3 1056 2364 117 57 22 chr17 61752410 61752776 -33519875 + L1_Mus4 LINE L1 6101 6479 -157 3 1056 264 342 61 86 chr17 61753598 61753761 -33518890 + B2_Mm1t SINE B2 1 159 -34 3 1056 25 51 0 0 chr17 61753778 61753817 -33518834 + AT_rich Low_complexity Low_complexity 1 39 0 3 1056 321 365 0 59 chr17 61754350 61754452 -33518199 - PB1D10 SINE Alu -21 96 1 3 1056 25 0 0 0 chr17 61754461 61754486 -33518165 + AT_rich Low_complexity Low_complexity 1 25 0 3 1056 322 377 19 19 chr17 61754728 61754836 -33517815 - PB1D10 SINE Alu -9 108 1 3 1056 29 0 0 0 chr17 61754845 61754874 -33517777 + AT_rich Low_complexity Low_complexity 1 29 0 3 1056 347 309 39 39 chr17 61755102 61755284 -33517367 - L1MA8 LINE L1 -279 6012 5831 3 1056 205 274 20 0 chr17 61755670 61755721 -33516930 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1056 316 258 50 35 chr17 61755950 61756151 -33516500 - L1MA8 LINE L1 -842 5301 5098 3 1056 578 270 54 5 chr17 61756305 61756510 -33516141 - L1MA8 LINE L1 -2205 3938 3724 3 1056 2163 169 134 99 chr17 61756513 61757138 -33515513 + RMER6C LTR ERVK 44 690 0 3 1056 828 114 98 0 chr17 61757343 61757475 -33515176 + B1_Mus1 SINE Alu 2 146 -2 3 1056 279 0 0 0 chr17 61757475 61757506 -33515145 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1056 203 122 24 24 chr17 61758462 61758504 -33514147 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1056 253 152 33 17 chr17 61759102 61759162 -33513489 + (TTTAA)n Simple_repeat Simple_repeat 1 61 0 3 1056 24 32 0 0 chr17 61759300 61759331 -33513320 + AT_rich Low_complexity Low_complexity 1 31 0 3 1056 3099 74 10 0 chr17 61759342 61759749 -33512902 + L1_Mus1 LINE L1 6157 6567 0 3 1056 7600 60 4 12 chr17 61759796 61760899 -33511752 - L1Md_F2 LINE L1 -12 6570 5482 3 1056 3660 153 42 3 chr17 61760925 61761542 -33511109 + Lx3C LINE L1 6329 6969 -7 3 1056 328 329 31 12 chr17 61762004 61762164 -33510487 - Lx8 LINE L1 -970 6503 6341 3 1056 1549 114 15 26 chr17 61762619 61762888 -33509763 - Lx LINE L1 -9 6645 6380 3 1056 369 43 0 0 chr17 61763076 61763123 -33509528 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1056 261 0 0 0 chr17 61763335 61763364 -33509287 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1056 2301 178 45 24 chr17 61763380 61763944 -33508707 - RLTR31_Mm LTR ERVK -3 558 22 4 1056 700 240 50 86 chr17 61764048 61764349 -33508302 + RLTR20B3 LTR ERVK 21 310 -267 4 1056 1532 249 38 124 chr17 61764719 61765298 -33507353 + RMER19C LTR ERVK 1 529 -82 4 1056 1022 330 69 36 chr17 61765403 61765982 -33506669 - Lx8 LINE L1 -121 7352 6755 4 1056 400 266 150 70 chr17 61765999 61766220 -33506431 + L1M2 LINE L1 2938 3200 -2943 4 1056 404 19 0 19 chr17 61766220 61766274 -33506377 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 4 1056 1025 95 0 0 chr17 61766274 61766411 -33506240 - B1_Mus1 SINE Alu -11 137 1 4 1056 400 266 150 70 chr17 61766411 61766515 -33506136 + L1M2 LINE L1 3201 3289 -2854 4 1056 815 225 6 0 chr17 61766519 61766701 -33505950 - L1_Mur3 LINE L1 -3449 2431 2249 4 1056 28 0 0 0 chr17 61767091 61767119 -33505532 + AT_rich Low_complexity Low_complexity 1 28 0 4 1056 457 329 62 4 chr17 61767141 61767468 -33505183 + L1M5 LINE L1 5380 5726 -436 4 1056 23 33 0 0 chr17 61767869 61767899 -33504752 + AT_rich Low_complexity Low_complexity 1 30 0 4 1056 477 0 0 0 chr17 61768616 61768669 -33503982 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 1056 447 365 5 15 chr17 61770303 61770503 -33502148 + LTR40b LTR ERVL 43 240 -222 4 1056 474 338 145 41 chr17 61771392 61771805 -33500846 + MLT1C LTR MaLR 8 463 -4 4 1056 438 312 22 7 chr17 61771976 61772115 -33500536 + HERVL40-int LTR ERVL 3727 3867 -1663 4 1056 296 145 0 31 chr17 61772471 61772535 -33500116 + RMER4B LTR ERVK 3 64 -521 4 1056 273 154 19 0 chr17 61772540 61772592 -33500059 + RMER4B LTR ERVK 533 585 0 4 1056 460 193 123 65 chr17 61772630 61772785 -33499866 - RMER20B LTR ERVK -2 625 462 4 1056 1059 218 42 5 chr17 61772796 61773013 -33499638 - RMER20B LTR ERVK -398 229 5 4 1056 195 235 0 0 chr17 61773414 61773465 -33499186 + (CATA)n Simple_repeat Simple_repeat 4 54 0 4 1056 301 343 105 14 chr17 61773563 61773797 -33498854 + MLT1E LTR MaLR 397 654 0 4 1056 355 310 54 25 chr17 61774847 61775133 -33497518 + HERVL40-int LTR ERVL 5320 5472 -58 4 1056 276 392 52 42 chr17 61775171 61775483 -33497168 + LTR40a LTR ERVL 32 378 -141 4 1056 553 337 51 45 chr17 61775567 61775921 -33496730 - Lx8 LINE L1 -10 7463 7108 4 1056 29 0 0 0 chr17 61775944 61775973 -33496678 + AT_rich Low_complexity Low_complexity 1 29 0 4 1056 21 82 0 0 chr17 61776531 61776580 -33496071 + AT_rich Low_complexity Low_complexity 1 49 0 4 1056 264 342 14 0 chr17 61776886 61776959 -33495692 + ID4 SINE ID 5 78 -5 4 1056 30 27 0 0 chr17 61776959 61776996 -33495655 + AT_rich Low_complexity Low_complexity 1 37 0 4 1056 25 0 0 0 chr17 61777192 61777217 -33495434 + AT_rich Low_complexity Low_complexity 1 25 0 4 1056 531 154 8 17 chr17 61777559 61777678 -33494973 + CT-rich Low_complexity Low_complexity 3 120 0 4 1056 21 71 0 0 chr17 61777802 61777844 -33494807 + AT_rich Low_complexity Low_complexity 1 42 0 4 1056 3181 126 10 10 chr17 61777918 61778415 -33494236 - L1_Mus4 LINE L1 0 6636 6140 4 1056 27 29 0 0 chr17 61778442 61778476 -33494175 + AT_rich Low_complexity Low_complexity 1 34 0 4 1056 1557 155 21 42 chr17 61778611 61778900 -33493751 - Lx2 LINE L1 -4 6993 6711 4 1056 1099 92 7 7 chr17 61778900 61779054 -33493597 - MTB LTR MaLR -1 399 246 4 1056 4273 189 19 1 chr17 61779054 61779881 -33492770 + Lx4B LINE L1 4898 5739 -138 4 1056 3393 205 47 3 chr17 61779896 61780639 -33492012 + Lx4B LINE L1 5827 6602 -456 4 1056 358 275 90 14 chr17 61780685 61780829 -33491822 + Lx4B LINE L1 6866 7020 -38 4 1056 222 37 0 0 chr17 61780844 61780871 -33491780 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 4 1056 576 29 0 0 chr17 61780873 61780943 -33491708 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 4 1056 260 200 0 0 chr17 61780944 61781014 -33491637 + Lx9 LINE L1 7438 7507 -137 4 1056 300 277 37 30 chr17 61781014 61781178 -33491473 + Lx9 LINE L1 7458 7622 -22 4 1056 1048 251 69 8 chr17 61782477 61782738 -33489913 + Lx2B LINE L1 6724 7000 0 4 1056 4884 128 98 13 chr17 61782769 61783664 -33488987 + Lx3A LINE L1 6004 6974 -7 4 1056 4106 54 45 0 chr17 61784221 61784754 -33487897 - L1Md_F3 LINE L1 -14 6570 6014 4 1056 1019 76 11 11 chr17 61784812 61784986 -33487665 + (TAGA)n Simple_repeat Simple_repeat 3 176 0 4 1056 369 182 117 39 chr17 61785578 61785681 -33486970 - MTD LTR MaLR -308 111 1 4 1056 21 0 0 0 chr17 61786287 61786308 -33486343 + AT_rich Low_complexity Low_complexity 1 21 0 4 1056 21 36 0 0 chr17 61786627 61786655 -33485996 + AT_rich Low_complexity Low_complexity 1 28 0 4 1056 261 0 0 0 chr17 61787602 61787631 -33485020 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1056 318 340 98 20 chr17 61787926 61788079 -33484572 + L4 LINE RTE 1583 1747 -282 4 1056 245 339 43 78 chr17 61788303 61788444 -33484207 + ID_B1 SINE B4 88 223 -1 4 1056 2135 108 13 3 chr17 61789061 61789367 -33483284 + RLTR27 LTR ERVK 1 309 0 4 1056 2715 227 56 3 chr17 61789371 61790015 -33482636 - Lx2B LINE L1 -17 6983 6306 4 1056 307 190 21 58 chr17 61790002 61790100 -33482551 - Lx2B LINE L1 -662 6396 6300 4 1056 32 43 0 0 chr17 61790623 61790669 -33481982 + AT_rich Low_complexity Low_complexity 1 46 0 4 1056 6354 46 1 1 chr17 61790684 61791464 -33481187 - L1Md_F3 LINE L1 -1 6583 5804 4 1056 1322 43 6 0 chr17 61791464 61791628 -33481023 + L1Md_F3 LINE L1 5627 5791 -791 4 1056 22 0 0 0 chr17 61791698 61791720 -33480931 + AT_rich Low_complexity Low_complexity 1 22 0 4 1056 392 308 25 33 chr17 61792396 61792517 -33480134 + RSINE1 SINE B4 1 120 -45 4 1056 270 0 0 0 chr17 61792540 61792570 -33480081 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1056 216 267 0 0 chr17 61792571 61792631 -33480020 + GA-rich Low_complexity Low_complexity 1 60 0 4 1056 477 0 0 0 chr17 61792936 61792989 -33479662 + (CTG)n Simple_repeat Simple_repeat 3 55 0 4 1056 1062 238 19 26 chr17 61793279 61793546 -33479105 - ORR1D1 LTR MaLR -4 370 106 4 1056 459 0 0 0 chr17 61793580 61793631 -33479020 + (TC)n Simple_repeat Simple_repeat 2 52 0 4 1056 351 0 0 0 chr17 61793633 61793672 -33478979 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1056 557 110 42 30 chr17 61793672 61793704 -33478947 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 1056 3878 43 19 0 chr17 61793704 61794170 -33478481 - MT2C_Mm LTR ERVL 0 475 1 4 1056 557 110 42 30 chr17 61794170 61794305 -33478346 + (TA)n Simple_repeat Simple_repeat 2 135 0 4 1056 2706 112 15 0 chr17 61794342 61794736 -33477915 - MTB LTR MaLR 0 400 1 4 1056 444 19 0 0 chr17 61794737 61794790 -33477861 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1056 215 304 0 0 chr17 61795354 61795410 -33477241 - PB1D7 SINE Alu -43 77 22 4 1056 226 179 0 0 chr17 61795557 61795596 -33477055 + RMER6A LTR ERVK 1 39 -681 4 1056 628 145 40 115 chr17 61795581 61795729 -33476922 + MT2B LTR ERVL 151 287 -314 4 1056 1457 216 24 161 chr17 61795749 61796264 -33476387 + RMER6A LTR ERVK 340 756 0 4 1056 2579 202 30 12 chr17 61796685 61797192 -33475459 + RMER20A LTR ERVK 1 516 0 4 1056 2296 49 10 3 chr17 61798669 61798986 -33473665 - L1Md_F3 LINE L1 0 6584 6273 4 1056 6937 45 1 0 chr17 61798986 61800231 -33472420 + L1Md_F3 LINE L1 5012 6257 -327 4 1056 21 0 0 0 chr17 61800231 61800252 -33472399 + AT_rich Low_complexity Low_complexity 1 21 0 4 1056 211 234 0 0 chr17 61800638 61800685 -33471966 + T-rich Low_complexity Low_complexity 1 47 0 4 1056 1347 230 68 35 chr17 61800815 61801246 -33471405 - RMER6D LTR ERVK -210 480 3 4 1056 1849 196 27 3 chr17 61801248 61801622 -33471029 - RMER6-int LTR ERVK 0 3177 2795 4 1056 975 122 0 0 chr17 61801669 61801808 -33470843 + B1_Mm SINE Alu 9 147 0 4 1056 207 0 0 0 chr17 61801808 61801831 -33470820 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1056 512 193 72 8 chr17 61801835 61802029 -33470622 - MurERV4_19-int LTR ERVK -862 4918 4725 4 1056 274 196 89 0 chr17 61802062 61802118 -33470533 - LSU-rRNA_Hsa rRNA rRNA -3198 1837 1777 4 1056 3187 125 9 38 chr17 61802146 61802695 -33469956 + Lx2 LINE L1 6454 6986 -11 4 1056 7248 55 0 0 chr17 61802691 61803589 -33469062 + L1Md_T LINE L1 5684 6581 -1 4 1056 31 58 0 0 chr17 61803589 61803641 -33469010 + AT_rich Low_complexity Low_complexity 1 52 0 4 1056 4427 148 94 32 chr17 61803641 61804767 -33467884 - RMER6-int LTR ERVK -687 2490 1295 4 1056 282 141 14 72 chr17 61804767 61804836 -33467815 + RMER6-int LTR ERVK 2645 2709 -468 4 1056 1070 301 55 71 chr17 61804849 61805343 -33467308 + RLTR12B LTR ERVK 1 486 -42 4 1056 21 0 0 0 chr17 61805374 61805395 -33467256 + AT_rich Low_complexity Low_complexity 1 21 0 4 1056 1614 197 204 33 chr17 61805395 61805905 -33466746 - RMER6D LTR ERVK -85 605 9 4 1056 231 36 0 0 chr17 61805907 61805935 -33466716 + (TTCC)n Simple_repeat Simple_repeat 3 30 0 4 1056 5930 161 19 7 chr17 61805975 61807187 -33465464 - RMER6-int LTR ERVK -1896 1281 1 4 1056 3303 205 16 54 chr17 61807191 61807337 -33465314 - RMER6D LTR ERVK -4 716 578 4 1056 5027 141 112 16 chr17 61807337 61808211 -33464440 + RMER17B LTR ERVK 1 958 0 4 1056 3303 205 16 54 chr17 61808211 61808807 -33463844 - RMER6D LTR ERVK -143 577 2 4 1056 226 363 18 9 chr17 61808860 61808974 -33463677 - Lx5 LINE L1 -148 6902 6788 4 1056 25 65 0 0 chr17 61809126 61809172 -33463479 + AT_rich Low_complexity Low_complexity 1 46 0 4 1056 258 156 0 0 chr17 61809364 61809428 -33463223 + CT-rich Low_complexity Low_complexity 2 65 0 4 1056 633 66 0 0 chr17 61809429 61809520 -33463131 + (TG)n Simple_repeat Simple_repeat 2 92 0 4 1056 346 416 6 13 chr17 61810636 61810792 -33461859 - MTE2b-int LTR MaLR -530 1050 896 4 1056 522 0 0 0 chr17 61810847 61810905 -33461746 + (TTTTC)n Simple_repeat Simple_repeat 2 59 0 4 1056 1005 209 20 0 chr17 61810960 61811156 -33461495 - URR1A DNA MER1_type 0 226 27 4 1056 424 309 16 0 chr17 61811165 61811288 -33461363 - MTE2b-int LTR MaLR -1444 136 12 4 1056 1019 336 21 18 chr17 61811306 61811642 -33461009 - MTE2b LTR MaLR -20 359 23 4 1056 959 326 87 17 chr17 61811631 61812043 -33460608 - MTE2b-int LTR MaLR -1139 441 1 4 1056 740 298 31 23 chr17 61812064 61812325 -33460326 - MTE2b LTR MaLR -26 353 91 4 1056 788 334 66 42 chr17 61812720 61813217 -33459434 - Lx8 LINE L1 -189 7284 6776 4 1056 408 82 0 0 chr17 61813514 61813575 -33459076 + (TAAA)n Simple_repeat Simple_repeat 2 62 0 4 1056 404 328 198 22 chr17 61814620 61815297 -33457354 + L1M3 LINE L1 3220 4014 -2129 4 1056 2069 44 0 0 chr17 61815412 61815661 -33456990 - L1_Mus2 LINE L1 -703 5863 5615 4 1056 444 46 0 15 chr17 61815661 61815727 -33456924 + L1Md_F2 LINE L1 6508 6572 -10 5 1056 1098 133 0 0 chr17 61815730 61815888 -33456763 - L1_Mus3 LINE L1 -156 6482 6325 5 1056 1037 95 24 6 chr17 61815888 61816058 -33456593 + L1_Mus3 LINE L1 6460 6632 -6 5 1056 460 192 169 8 chr17 61816138 61816374 -33456277 + Lx9 LINE L1 7370 7643 -1 5 1056 501 321 70 3 chr17 61816395 61816764 -33455887 + L1M3 LINE L1 4220 4613 -1527 4 1056 2714 146 4 2 chr17 61816824 61817277 -33455374 + Lx2 LINE L1 6543 6996 -1 5 1056 816 259 106 60 chr17 61817310 61818057 -33454594 - Lx9 LINE L1 -1009 6635 5750 5 1056 243 222 178 0 chr17 61818327 61818417 -33454234 - Lx9 LINE L1 -2 7642 7537 5 1056 1504 289 82 21 chr17 61818586 61819110 -33453541 + RMER1C Other Other 504 1059 -283 5 1056 5514 42 0 0 chr17 61819101 61819907 -33452744 - L1Md_F2 LINE L1 -350 6232 5427 5 1056 1934 60 4 0 chr17 61819907 61820156 -33452495 + L1Md_F2 LINE L1 6325 6574 -8 5 1056 999 222 91 35 chr17 61820161 61820327 -33452324 + RMER1C Other Other 1041 1225 -117 5 1056 282 29 0 0 chr17 61820327 61820362 -33452289 + (TTA)n Simple_repeat Simple_repeat 2 36 0 5 1056 999 222 91 35 chr17 61820362 61820480 -33452171 + RMER1C Other Other 1226 1341 -1 5 1056 189 277 59 44 chr17 61820979 61821047 -33451604 - L2 LINE L2 -522 2897 2829 5 1056 314 312 0 36 chr17 61822822 61822905 -33449746 - ID SINE ID -143 81 2 5 1056 207 69 0 0 chr17 61823169 61823198 -33449453 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1056 192 77 0 0 chr17 61823810 61823836 -33448815 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 5 1056 1839 254 40 23 chr17 61823836 61824307 -33448344 - Lx5 LINE L1 -16 7034 6556 5 1056 271 299 11 0 chr17 61824448 61824535 -33448116 + (CA)n Simple_repeat Simple_repeat 1 88 0 5 1056 299 235 8 0 chr17 61824556 61824675 -33447976 + (CA)n Simple_repeat Simple_repeat 1 120 0 5 1056 204 40 0 0 chr17 61824672 61824697 -33447954 + (CAA)n Simple_repeat Simple_repeat 3 27 0 5 1056 902 302 73 6 chr17 61824710 61825027 -33447624 - Lx7 LINE L1 -483 7213 6876 5 1056 579 298 75 21 chr17 61825040 61825414 -33447237 - Lx7 LINE L1 -1546 6150 5757 5 1056 22 0 0 0 chr17 61825457 61825479 -33447172 + AT_rich Low_complexity Low_complexity 1 22 0 5 1056 2716 238 48 3 chr17 61825531 61826236 -33446415 - Lx9 LINE L1 -1 7643 6907 5 1056 36 53 0 0 chr17 61826615 61826672 -33445979 + AT_rich Low_complexity Low_complexity 1 57 0 5 1056 320 295 117 20 chr17 61826793 61826990 -33445661 - Lx8 LINE L1 -9 7464 7249 5 1056 472 96 0 0 chr17 61827095 61827168 -33445483 - Lx3B LINE L1 0 6973 6901 5 1056 328 366 135 17 chr17 61827436 61827792 -33444859 + L2a LINE L2 3027 3424 -2 5 1056 2481 146 10 2 chr17 61828203 61828601 -33444050 + Lx2A1 LINE L1 6483 6883 -125 5 1056 1118 89 0 0 chr17 61829503 61829649 -33443002 - B1_Mm SINE Alu -1 146 1 5 1056 591 210 20 55 chr17 61830277 61830423 -33442228 + RLTR15 LTR ERVK 13 153 -206 5 1056 414 338 21 7 chr17 61831389 61831532 -33441119 + B3 SINE B2 4 148 -68 5 1056 732 111 0 0 chr17 61831534 61831651 -33441000 + (CA)n Simple_repeat Simple_repeat 2 118 0 5 1056 2716 74 45 10 chr17 61832168 61832565 -33440086 - RLTR10A LTR ERVK 0 411 1 5 1056 893 191 132 29 chr17 61834226 61834431 -33438220 - Lx4A LINE L1 0 7058 6833 5 1056 347 98 16 0 chr17 61834436 61834497 -33438154 + (TA)n Simple_repeat Simple_repeat 1 62 0 5 1056 24 32 0 0 chr17 61834996 61835027 -33437624 + AT_rich Low_complexity Low_complexity 1 31 0 5 1056 1639 96 8 46 chr17 61835974 61836277 -33436374 - L1_Mus2 LINE L1 0 6566 6314 5 1056 217 0 61 0 chr17 61836291 61836324 -33436327 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 5 1056 420 77 0 0 chr17 61836361 61836426 -33436225 + (T)n Simple_repeat Simple_repeat 1 65 0 5 1056 631 287 180 17 chr17 61836431 61836841 -33435810 - RMER5 LTR ERV1 -54 480 4 5 1056 21 57 0 0 chr17 61837279 61837314 -33435337 + AT_rich Low_complexity Low_complexity 1 35 0 5 1056 363 96 0 0 chr17 61837501 61837553 -33435098 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1056 1297 290 6 50 chr17 61837739 61838028 -33434623 - Lx6 LINE L1 -171 7289 7015 5 1056 491 37 185 0 chr17 61838028 61838109 -33434542 - L1_Mus1 LINE L1 0 6567 6472 5 1056 1297 290 6 50 chr17 61838109 61838178 -33434473 - Lx6 LINE L1 -446 7014 6947 5 1056 32 81 0 0 chr17 61839577 61839651 -33433000 + AT_rich Low_complexity Low_complexity 1 74 0 5 1056 324 0 0 0 chr17 61839835 61839871 -33432780 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1056 204 97 0 0 chr17 61839872 61839903 -33432748 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 1056 507 73 0 0 chr17 61840662 61840730 -33431921 + (TA)n Simple_repeat Simple_repeat 2 69 0 5 1056 693 61 0 0 chr17 61840761 61840860 -33431791 + (TG)n Simple_repeat Simple_repeat 2 100 0 5 1056 1265 274 94 36 chr17 61840860 61841380 -33431271 - RMER15 LTR ERVL -3 572 23 5 1056 233 185 18 53 chr17 61841392 61841449 -33431202 - RMER15 LTR ERVL -510 65 11 5 1056 304 329 94 25 chr17 61841481 61841640 -33431011 - MTE2a LTR MaLR -24 355 186 5 1056 397 237 60 73 chr17 61841798 61841948 -33430703 - B1_Mur1 SINE Alu -1 148 1 5 1056 441 0 0 0 chr17 61842058 61842107 -33430544 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 5 1056 24 53 0 0 chr17 61842294 61842332 -33430319 + AT_rich Low_complexity Low_complexity 1 38 0 5 1056 2084 36 0 0 chr17 61842700 61842951 -33429700 + L1Md_F3 LINE L1 6317 6567 -17 5 1056 239 260 178 0 chr17 61842967 61843040 -33429611 - Lx8 LINE L1 -419 7054 6969 5 1056 839 168 6 17 chr17 61843047 61843212 -33429439 - MTC LTR MaLR 0 421 247 5 1056 311 351 35 50 chr17 61843173 61843314 -33429337 + B3 SINE B2 67 205 -11 5 1056 343 222 9 23 chr17 61844392 61844499 -33428152 + L1MA4 LINE L1 5824 5928 -252 5 1056 351 234 17 22 chr17 61844560 61844739 -33427912 + (CATATA)n Simple_repeat Simple_repeat 2 179 0 5 1056 581 213 17 6 chr17 61844712 61844887 -33427764 + (TA)n Simple_repeat Simple_repeat 2 178 0 5 1056 322 292 25 8 chr17 61844891 61845012 -33427639 + (CATATA)n Simple_repeat Simple_repeat 6 128 0 5 1056 221 0 35 0 chr17 61845360 61845389 -33427262 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 5 1056 315 0 0 0 chr17 61845391 61845426 -33427225 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1056 1082 60 0 0 chr17 61845427 61845561 -33427090 - B1_Mus2 SINE Alu -12 135 2 5 1056 5291 114 40 11 chr17 61846490 61847335 -33425316 + Lx3A LINE L1 6104 6973 -8 5 1056 378 0 0 0 chr17 61847790 61847832 -33424819 + (TTTTTG)n Simple_repeat Simple_repeat 6 47 0 5 1056 1155 55 14 0 chr17 61847832 61847977 -33424674 - B1_Mus1 SINE Alu 0 148 2 5 1056 351 0 0 0 chr17 61848076 61848115 -33424536 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1056 33 0 0 0 chr17 61848118 61848151 -33424500 + AT_rich Low_complexity Low_complexity 1 33 0 5 1056 7221 71 20 3 chr17 61848294 61849253 -33423398 - L1_Mus2 LINE L1 -1 6565 5591 5 1056 391 331 103 54 chr17 61849254 61849806 -33422845 - L1MA5 LINE L1 -379 5921 5307 5 1056 339 25 0 0 chr17 61849849 61849889 -33422762 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1056 250 333 94 43 chr17 61849904 61850042 -33422609 - B4 SINE B4 -22 270 126 5 1056 345 278 96 37 chr17 61850176 61850554 -33422097 - L1MA5 LINE L1 -789 5354 4904 5 1056 288 281 52 104 chr17 61850702 61850913 -33421738 - L1M2 LINE L1 -1022 4858 4659 5 1056 741 309 98 19 chr17 61850927 61851505 -33421146 - L1M2 LINE L1 -1536 4344 3736 5 1056 2932 57 13 0 chr17 61851506 61851894 -33420757 - MTB LTR MaLR -7 393 1 5 1056 268 340 47 47 chr17 61851906 61852184 -33420467 - L1M2 LINE L1 -2384 3759 3482 5 1056 4976 261 46 23 chr17 61852200 61853531 -33419120 - MERVL_2A-int LTR ERVL -1014 4747 3387 5 1056 308 268 71 0 chr17 61853538 61853650 -33419001 + Lx9 LINE L1 6817 6936 -708 5 1056 645 128 0 0 chr17 61853653 61853755 -33418896 + (TA)n Simple_repeat Simple_repeat 1 102 0 5 1056 284 340 55 9 chr17 61853894 61854004 -33418647 + RMER12 LTR ERVK 743 857 -465 5 1056 261 254 0 0 chr17 61854005 61854076 -33418575 + (TA)n Simple_repeat Simple_repeat 2 72 0 5 1056 13624 63 0 0 chr17 61854144 61855888 -33416763 + L1Md_F2 LINE L1 3843 5586 -297 5 1056 7978 51 4 0 chr17 61855888 61856875 -33415776 + L1Md_F2 LINE L1 5587 6577 -5 5 1056 495 0 0 0 chr17 61856901 61856956 -33415695 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1056 965 173 6 11 chr17 61856964 61857139 -33415512 + Lx9 LINE L1 7010 7183 -461 5 1056 736 228 180 8 chr17 61857155 61857416 -33415235 + Lx9 LINE L1 7290 7595 -49 5 1056 229 158 0 0 chr17 61857475 61857513 -33415138 - MT2A LTR ERVL -495 38 1 5 1056 347 291 0 0 chr17 61857813 61857892 -33414759 - Lx8 LINE L1 -195 7278 7200 5 1056 325 167 311 0 chr17 61857927 61858017 -33414634 - Lx2 LINE L1 -2 6995 6878 5 1056 263 246 57 49 chr17 61858017 61858247 -33414404 - L1M2 LINE L1 -2996 3147 2899 5 1056 992 110 14 0 chr17 61858342 61858487 -33414164 + B1_Mus1 SINE Alu 2 148 0 5 1056 315 161 0 0 chr17 61858487 61858543 -33414108 + A-rich Low_complexity Low_complexity 1 56 0 5 1056 341 106 0 0 chr17 61860897 61860944 -33411707 - HAL1-3A_ME LINE L1 -837 2021 1975 5 1056 195 134 35 35 chr17 61860951 61861036 -33411615 + (TG)n Simple_repeat Simple_repeat 1 85 0 5 1056 21 0 0 0 chr17 61861349 61861370 -33411281 + AT_rich Low_complexity Low_complexity 1 21 0 5 1056 519 148 0 0 chr17 61861445 61861533 -33411118 + (TA)n Simple_repeat Simple_repeat 2 89 0 5 1056 26 82 0 0 chr17 61862017 61862078 -33410573 + AT_rich Low_complexity Low_complexity 1 61 0 5 1056 3074 14 0 0 chr17 61862687 61863038 -33409613 + L1Md_T LINE L1 5236 5586 -297 5 1056 8154 49 0 0 chr17 61863038 61864031 -33408620 + L1Md_T LINE L1 5587 6579 -3 5 1056 952 240 199 17 chr17 61864927 61865221 -33407430 + Lx9 LINE L1 7153 7516 -128 5 1056 378 0 0 0 chr17 61865221 61865263 -33407388 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1056 492 18 0 0 chr17 61865263 61865319 -33407332 + (GA)n Simple_repeat Simple_repeat 1 57 0 5 1056 952 240 199 17 chr17 61865319 61865439 -33407212 + Lx9 LINE L1 7517 7643 -1 5 16 1176 123 45 0 chr17 61865874 61866053 -33406598 - B2_Mm2 SINE B2 -8 187 1 5 1057 186 167 0 0 chr17 61866378 61866414 -33406237 + (TTA)n Simple_repeat Simple_repeat 2 37 0 5 1057 268 360 0 8 chr17 61866418 61866544 -33406107 - Lx6 LINE L1 -31 7429 7305 5 1057 730 123 0 0 chr17 61866542 61866648 -33406003 + Lx5 LINE L1 5650 5755 -1295 5 1057 879 146 58 12 chr17 61866673 61866846 -33405805 - B2_Mm2 SINE B2 -13 182 2 5 1057 2022 158 15 3 chr17 61866874 61867217 -33405434 - Lx2B LINE L1 -11 6986 6640 5 1057 1370 65 0 0 chr17 61867215 61867399 -33405252 - L1Md_A LINE L1 0 6582 6399 5 1057 4861 133 21 16 chr17 61867415 61868212 -33404439 - Lx2B LINE L1 -371 6629 5829 5 1057 25 75 0 0 chr17 61868214 61868267 -33404384 + AT_rich Low_complexity Low_complexity 1 53 0 6 1057 21 71 0 0 chr17 61868457 61868499 -33404152 + AT_rich Low_complexity Low_complexity 1 42 0 6 1057 566 109 18 9 chr17 61868782 61868893 -33403758 - L1_Mus3 LINE L1 0 6638 6527 6 1057 12957 94 36 11 chr17 61868926 61869051 -33403600 - L1VL2 LINE L1 -634 2981 2855 6 1057 624 48 0 0 chr17 61869051 61869135 -33403516 + (TG)n Simple_repeat Simple_repeat 2 85 0 6 1057 12957 100 34 8 chr17 61869135 61871743 -33400908 - L1VL2 LINE L1 -761 2854 174 6 1057 603 309 57 10 chr17 61871767 61871960 -33400691 + ORR1D2 LTR MaLR 1 202 -168 6 1057 3406 270 121 30 chr17 61871933 61873043 -33399608 + ORR1D2-int LTR MaLR 40 1250 -120 6 1057 27 49 0 0 chr17 61873075 61873116 -33399535 + AT_rich Low_complexity Low_complexity 1 41 0 6 1057 1792 263 38 59 chr17 61873465 61873533 -33399118 + RMER15 LTR ERVL 1 69 -506 6 1057 414 0 0 0 chr17 61873533 61873579 -33399072 + (TTTTC)n Simple_repeat Simple_repeat 4 49 0 6 1057 2094 191 10 14 chr17 61873579 61873993 -33398658 - Lx LINE L1 -15 6639 6228 6 1057 1792 263 38 59 chr17 61873993 61874496 -33398155 + RMER15 LTR ERVL 70 560 -15 6 1057 7007 133 16 11 chr17 61875902 61877805 -33394846 + Lx LINE L1 4741 6652 -2 6 1057 246 296 156 6 chr17 61878531 61878691 -33393960 - RMER5 LTR ERV1 -31 503 320 6 1057 388 309 172 6 chr17 61879304 61879467 -33393184 + B3 SINE B2 6 195 -21 6 1057 261 200 29 20 chr17 61879643 61879745 -33392906 + (TTTG)n Simple_repeat Simple_repeat 2 104 0 6 1057 788 161 73 0 chr17 61879752 61879889 -33392762 - B1_Mus1 SINE Alu 0 148 2 6 1057 1253 192 142 18 chr17 61879940 61880279 -33392372 + ORR1C2 LTR MaLR 1 381 -3 6 1057 241 313 32 80 chr17 61880301 61880426 -33392225 - MLT1A1 LTR MaLR -11 397 279 6 1057 2455 101 8 0 chr17 61880773 61881139 -33391512 + MusHAL1 LINE L1 1658 2026 -686 6 1057 29 0 0 0 chr17 61881183 61881212 -33391439 + AT_rich Low_complexity Low_complexity 1 29 0 6 1057 22 94 0 0 chr17 61881359 61881423 -33391228 + AT_rich Low_complexity Low_complexity 1 64 0 6 1057 26204 98 66 13 chr17 61881567 61886432 -33386219 + L1Md_F2 LINE L1 244 5351 -532 6 1057 526 78 0 0 chr17 61886428 61886492 -33386159 + L1Md_F2 LINE L1 5522 5585 -298 6 1057 7050 98 1 6 chr17 61886493 61887494 -33385157 + L1Md_F2 LINE L1 5587 6582 0 6 1057 936 261 167 30 chr17 61888401 61888808 -33383843 - RMER15 LTR ERVL -103 472 10 6 1057 284 369 198 0 chr17 61888845 61889062 -33383589 - L3 LINE CR1 -762 3727 3468 6 1057 228 287 112 41 chr17 61889718 61889816 -33382835 - PB1D10 SINE Alu -9 108 4 6 1057 228 256 16 55 chr17 61891426 61891554 -33381097 + GA-rich Low_complexity Low_complexity 3 125 0 6 1057 416 317 17 46 chr17 61891636 61891811 -33380840 + RLTR40 LTR ERVK 5 174 -643 6 1057 283 200 18 0 chr17 61891824 61891879 -33380772 - ORR1B2 LTR MaLR 0 367 312 6 1057 537 143 148 14 chr17 61891907 61892049 -33380602 - Lx3C LINE L1 -26 6950 6790 6 1057 1115 202 41 0 chr17 61892043 61892261 -33380390 + Lx3C LINE L1 6218 6444 -532 6 1057 1064 237 95 14 chr17 61892261 61892575 -33380076 - ORR1B2 LTR MaLR -16 313 1 6 1057 914 265 61 81 chr17 61892576 61893081 -33379570 + RLTR40 LTR ERVK 201 695 -122 6 1057 1644 139 36 61 chr17 61893129 61893459 -33379192 - Lx3C LINE L1 -2 6974 6653 6 1057 35133 82 10 5 chr17 61894307 61900486 -33372165 - L1Md_F2 LINE L1 -12 6570 364 6 1057 266 217 17 0 chr17 61900490 61900550 -33372101 - L1VL1 LINE L1 -6173 249 189 6 1057 22 35 0 0 chr17 61900655 61900684 -33371967 + AT_rich Low_complexity Low_complexity 1 29 0 6 1057 378 316 51 0 chr17 61901497 61901614 -33371037 + B1_Mur4 SINE Alu 27 149 -1 6 1057 243 0 0 0 chr17 61902840 61902867 -33369784 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1057 879 231 15 61 chr17 61902893 61903483 -33369168 - RMER17C LTR ERVK -327 482 3 6 1057 181 333 46 31 chr17 61904335 61904400 -33368251 + L4 LINE RTE 1085 1150 -879 6 1057 259 250 23 70 chr17 61905343 61905429 -33367222 + B1F SINE Alu 68 149 0 6 1057 339 274 185 25 chr17 61905492 61905649 -33367002 + Lx8 LINE L1 7171 7352 -121 6 1057 25 70 0 44 chr17 61905758 61905848 -33366803 + AT_rich Low_complexity Low_complexity 1 86 0 6 1057 26 0 0 0 chr17 61906308 61906334 -33366317 + AT_rich Low_complexity Low_complexity 1 26 0 6 1057 306 0 0 0 chr17 61906874 61906908 -33365743 + (TAA)n Simple_repeat Simple_repeat 3 36 0 6 1057 250 117 16 48 chr17 61907258 61907321 -33365330 + Lx9 LINE L1 7584 7644 0 6 1057 396 0 0 0 chr17 61907759 61907803 -33364848 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1057 582 300 31 26 chr17 61908518 61908744 -33363907 - RMER5 LTR ERV1 -39 495 269 6 1057 186 0 28 56 chr17 61908747 61908783 -33363868 + (TTTTTG)n Simple_repeat Simple_repeat 1 35 0 6 1057 3166 34 10 8 chr17 61908940 61909326 -33363325 + L1Md_F2 LINE L1 6184 6570 -12 6 1057 1888 168 16 0 chr17 61910267 61910589 -33362062 - ORR1A2 LTR MaLR 0 327 1 6 1057 1375 45 53 39 chr17 61910643 61910849 -33361802 - L1Md_F2 LINE L1 0 6582 6374 6 1057 1006 57 0 0 chr17 61910849 61910972 -33361679 + L1Md_F2 LINE L1 6257 6379 -203 6 1057 900 288 43 52 chr17 61911322 61911648 -33361003 + RLTR18 LTR ERVK 1 323 -293 6 1057 7374 111 16 1 chr17 61911664 61912037 -33360614 - L1_Mm LINE L1 -878 5005 4630 6 1057 458 0 35 0 chr17 61912037 61912094 -33360557 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 6 1057 7374 111 16 1 chr17 61912094 61912839 -33359812 - L1_Mm LINE L1 -1254 4629 3871 6 1057 1901 130 6 7 chr17 61912822 61913149 -33359502 + L1_Mm LINE L1 4973 5304 -579 6 1057 1436 115 68 0 chr17 61913149 61913401 -33359250 + L1_Mus3 LINE L1 6368 6636 -2 6 1057 1464 205 6 25 chr17 61913401 61913438 -33359213 + L1_Mm LINE L1 5300 5330 -547 6 1057 209 180 0 20 chr17 61913732 61913783 -33358868 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 1057 7608 79 2 6 chr17 61913822 61915085 -33357566 + L1_Mus2 LINE L1 5309 6566 0 6 1057 1048 240 29 4 chr17 61915086 61915329 -33357322 + RLTR18B LTR ERVK 264 512 0 6 1057 874 271 116 7 chr17 61915737 61916012 -33356639 - MTD LTR MaLR -20 399 95 6 1057 1286 81 0 6 chr17 61916010 61916026 -33356625 - B2_Mm2 SINE B2 -21 174 159 6 1057 396 0 0 0 chr17 61916026 61916070 -33356581 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 6 1057 1286 81 0 6 chr17 61916070 61916228 -33356423 - B2_Mm2 SINE B2 -37 158 1 6 1057 244 286 22 0 chr17 61916231 61916322 -33356329 - MTD LTR MaLR -324 95 3 6 1057 572 272 19 0 chr17 61916326 61916484 -33356167 - MTD-int LTR MaLR -2 1256 1096 6 1057 4228 115 85 24 chr17 61916486 61917365 -33355286 + RLTR13D4 LTR ERVK 1 1033 0 6 1057 2549 296 59 62 chr17 61917365 61918426 -33354225 - MTD-int LTR MaLR -175 1083 26 6 1057 207 0 0 0 chr17 61918480 61918503 -33354148 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1057 659 345 81 27 chr17 61918506 61918840 -33353811 - MTD LTR MaLR -39 380 29 6 1057 3886 100 14 2 chr17 61919191 61919742 -33352909 - LTRIS2 LTR ERV1 0 564 7 6 1057 23 0 0 0 chr17 61919770 61919793 -33352858 + AT_rich Low_complexity Low_complexity 1 23 0 6 1057 339 216 46 35 chr17 61919932 61920105 -33352546 + (TTATA)n Simple_repeat Simple_repeat 4 178 0 6 1057 32 98 0 0 chr17 61921388 61921490 -33351161 + AT_rich Low_complexity Low_complexity 1 102 0 6 1057 407 362 29 25 chr17 61921619 61921823 -33350828 + RMER15 LTR ERVL 267 471 -104 6 1057 388 222 213 0 chr17 61921856 61921964 -33350687 + URR1A DNA MER1_type 1 131 -95 6 1057 376 311 50 0 chr17 61922049 61922229 -33350422 + L1ME2 LINE L1 5673 5861 -303 6 1057 1531 221 193 48 chr17 61922262 61922995 -33349656 + RMER6C LTR ERVK 4 720 0 6 1057 601 288 48 0 chr17 61924004 61924150 -33348501 - RSINE1 SINE B4 -10 155 3 6 1057 275 0 29 0 chr17 61924424 61924459 -33348192 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 6 1057 905 47 8 0 chr17 61924477 61924604 -33348047 - L1Md_F2 LINE L1 -16 6566 6439 6 1057 3233 39 0 0 chr17 61924604 61924986 -33347665 - L1Md_F2 LINE L1 -380 6202 5821 6 1057 1757 56 0 0 chr17 61924983 61925196 -33347455 + L1Md_F2 LINE L1 6230 6442 -140 6 1057 3955 198 108 10 chr17 61925347 61926227 -33346424 - Lx5 LINE L1 -3 7047 6082 6 1057 227 179 0 35 chr17 61926740 61926798 -33345853 + A-rich Low_complexity Low_complexity 2 57 0 6 1057 426 356 40 14 chr17 61927018 61927240 -33345411 - Lx8 LINE L1 -352 7121 6894 6 1057 23 33 0 0 chr17 61927973 61928003 -33344648 + AT_rich Low_complexity Low_complexity 1 30 0 6 1057 243 289 34 34 chr17 61928967 61929085 -33343566 - Lx7 LINE L1 -19 7677 7560 6 1057 3068 67 15 0 chr17 61929087 61929490 -33343161 + L1_Mus1 LINE L1 6159 6567 0 6 1057 304 286 45 8 chr17 61929559 61929693 -33342958 - Lx7 LINE L1 -289 7407 7269 6 1057 1738 179 80 27 chr17 61929802 61930149 -33342502 - MTB_Mm LTR MaLR 0 407 41 6 1057 3717 210 70 23 chr17 61930149 61931133 -33341518 - MTB_Mm-int LTR MaLR -2 1096 118 6 1057 3935 259 38 19 chr17 61931161 61932850 -33339801 - Lx7 LINE L1 -1366 6330 4594 6 1057 742 273 89 29 chr17 61932861 61933174 -33339477 - Lx7 LINE L1 -2161 3719 3388 6 1057 818 306 46 30 chr17 61933178 61933357 -33339294 + Lx6 LINE L1 7143 7318 -142 6 1057 4567 50 0 20 chr17 61933357 61933948 -33338703 + L1Md_F3 LINE L1 6006 6584 0 6 1057 818 306 46 30 chr17 61933948 61934071 -33338580 + Lx6 LINE L1 7319 7449 -11 6 1057 901 227 30 72 chr17 61934114 61934475 -33338176 - Lx7 LINE L1 -2534 3346 3001 6 1057 1209 267 119 11 chr17 61934484 61934844 -33337807 - Lx9 LINE L1 -919 6725 6327 6 1057 716 181 8 0 chr17 61934861 61934988 -33337663 + RMER12B LTR ERVK 1 128 -1276 6 1057 2060 233 32 69 chr17 61934990 61935733 -33336918 - Lx9 LINE L1 -288 5559 4844 6 1057 533 228 23 53 chr17 61938407 61938578 -33334073 + Lx9 LINE L1 7355 7520 -124 6 1057 240 35 0 0 chr17 61938631 61938660 -33333991 + (TA)n Simple_repeat Simple_repeat 2 30 0 6 1057 2520 84 59 11 chr17 61939764 61940138 -33332513 - MTA_Mm LTR MaLR 0 396 5 6 1057 261 298 30 61 chr17 61940809 61940941 -33331710 + L1MC3 LINE L1 6709 6836 -949 6 1057 315 167 0 0 chr17 61941044 61941110 -33331541 + (ATG)n Simple_repeat Simple_repeat 3 68 0 6 1057 541 350 27 0 chr17 61941189 61941372 -33331279 + B4 SINE B4 17 204 -88 6 1057 683 251 26 179 chr17 61941381 61941885 -33330766 + RLTR23 LTR ERV1 4 430 0 6 1057 309 118 0 0 chr17 61942013 61942064 -33330587 + (GA)n Simple_repeat Simple_repeat 1 51 0 6 1057 332 288 82 38 chr17 61942125 61942284 -33330367 + L1MC3 LINE L1 6970 7135 -650 6 1057 225 0 0 0 chr17 61942943 61942968 -33329683 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 6 1057 22 56 0 0 chr17 61943819 61943855 -33328796 + AT_rich Low_complexity Low_complexity 1 36 0 6 1057 595 325 40 20 chr17 61944657 61944855 -33327796 + B3 SINE B2 8 209 -7 6 1057 21 57 0 0 chr17 61944961 61944996 -33327655 + AT_rich Low_complexity Low_complexity 1 35 0 6 1057 333 68 0 0 chr17 61945210 61945254 -33327397 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1057 822 59 0 0 chr17 61945800 61945902 -33326749 - L1_Mus3 LINE L1 -319 6247 6146 6 1057 1220 77 6 12 chr17 61945903 61946074 -33326577 + L1_Mus3 LINE L1 6262 6431 -207 6 1057 7261 55 0 0 chr17 61946067 61946979 -33325672 + L1_Mus1 LINE L1 5672 6567 0 6 1057 1279 129 29 0 chr17 61947014 61947224 -33325427 + L1_Mus3 LINE L1 6417 6632 -6 6 1057 341 322 60 66 chr17 61947380 61947832 -33324819 + L1MD1 LINE L1 3949 4397 -1749 7 1057 257 315 66 61 chr17 61947821 61948183 -33324468 + L1MD1 LINE L1 5302 5665 -694 7 1057 2041 125 53 3 chr17 61948326 61948663 -33323988 - Lx LINE L1 -6 6648 6295 7 1057 370 290 128 0 chr17 61948755 61948975 -33323676 + L1MD1 LINE L1 5867 6125 -117 7 1057 695 217 22 17 chr17 61949358 61949536 -33323115 - Lx5 LINE L1 0 7050 6872 7 1057 563 84 11 0 chr17 61949884 61949979 -33322672 + (TG)n Simple_repeat Simple_repeat 2 97 0 7 1057 702 324 96 12 chr17 61949983 61950046 -33322605 - B4 SINE B4 -5 287 225 7 1057 291 28 0 0 chr17 61950046 61950082 -33322569 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 7 1057 702 324 96 12 chr17 61950082 61950268 -33322383 - B4 SINE B4 -68 224 19 7 1057 183 42 0 0 chr17 61951175 61951199 -33321452 + (TTTAA)n Simple_repeat Simple_repeat 4 27 0 7 1057 941 107 35 29 chr17 61951199 61951362 -33321289 - L1Md_F2 LINE L1 -10 6572 6409 7 1057 692 259 113 0 chr17 61951615 61951897 -33320754 + Lx9 LINE L1 7329 7642 -2 7 1057 301 250 12 0 chr17 61953001 61953081 -33319570 + L1MA6 LINE L1 5697 5777 -523 7 1057 4339 24 16 0 chr17 61953279 61953783 -33318868 - L1Md_F3 LINE L1 -202 6382 5871 7 1057 1398 65 10 29 chr17 61953783 61953990 -33318661 + L1Md_F3 LINE L1 6382 6584 0 7 1057 318 274 106 12 chr17 61954037 61954207 -33318444 + L1MA6 LINE L1 6013 6198 -102 7 1057 24 0 0 0 chr17 61955648 61955672 -33316979 + AT_rich Low_complexity Low_complexity 1 24 0 7 1057 21 57 0 0 chr17 61955833 61955868 -33316783 + AT_rich Low_complexity Low_complexity 1 35 0 7 1057 378 0 0 0 chr17 61956718 61956760 -33315891 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 1057 21 82 0 0 chr17 61956898 61956947 -33315704 + AT_rich Low_complexity Low_complexity 1 49 0 7 1057 915 341 90 39 chr17 61959720 61960550 -33312101 - Lx8 LINE L1 -156 7317 6445 7 1057 454 293 0 17 chr17 61960553 61960671 -33311980 - B3A SINE B2 -82 116 1 7 1057 399 21 0 0 chr17 61961265 61961313 -33311338 + (TA)n Simple_repeat Simple_repeat 2 49 0 7 1057 357 24 0 0 chr17 61961615 61961657 -33310994 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1057 219 139 0 0 chr17 61962778 61962814 -33309837 + (CATA)n Simple_repeat Simple_repeat 1 36 0 7 1057 5472 123 71 14 chr17 61963495 61964978 -33307673 - L1_Mur1 LINE L1 -3844 2042 199 7 1057 450 144 113 19 chr17 61964997 61965103 -33307548 - L1_Mus4 LINE L1 -3 6633 6518 7 1057 13295 157 30 91 chr17 61965100 61967099 -33305552 - L1VL4 LINE L1 -1791 4092 2120 7 1057 414 0 0 0 chr17 61967099 61967145 -33305506 + (GA)n Simple_repeat Simple_repeat 1 46 0 7 1057 921 131 0 0 chr17 61967145 61967275 -33305376 - B1_Mus1 SINE Alu -16 132 3 7 1057 421 275 88 40 chr17 61967275 61967317 -33305334 - B4 SINE B4 -200 92 44 7 1057 13295 159 27 66 chr17 61967275 61968735 -33303916 - L1VL4 LINE L1 -3764 2119 689 7 1057 854 291 82 50 chr17 61968765 61969302 -33303349 - RLTR20D LTR ERVK 0 551 1 7 1057 901 304 46 47 chr17 61969924 61970285 -33302366 - MTD LTR MaLR -15 404 24 7 1057 370 365 16 0 chr17 61971310 61971436 -33301215 - ID_B1 SINE B4 -63 161 34 7 1057 231 88 0 0 chr17 61971706 61971740 -33300911 + (CATA)n Simple_repeat Simple_repeat 2 35 0 7 1057 298 240 40 8 chr17 61971743 61971869 -33300782 + Lx9 LINE L1 7514 7643 -1 7 1057 21389 152 16 10 chr17 61971877 61976387 -33296264 + L1VL2 LINE L1 363 4906 -977 7 1057 36 62 0 0 chr17 61976722 61976786 -33295865 + AT_rich Low_complexity Low_complexity 1 64 0 7 1057 307 167 0 0 chr17 61978103 61978151 -33294500 - L1Md_F2 LINE L1 -551 6031 5984 7 1057 2800 67 8 20 chr17 61978151 61978545 -33294106 + L1Md_F2 LINE L1 6194 6582 0 7 1057 229 26 53 0 chr17 61979037 61979075 -33293576 + (TTTTG)n Simple_repeat Simple_repeat 5 44 0 7 1057 1100 78 0 0 chr17 61979078 61979219 -33293432 - B1_Mus2 SINE Alu -5 142 2 7 1057 192 185 0 0 chr17 61979590 61979644 -33293007 + (TATAA)n Simple_repeat Simple_repeat 5 58 0 7 1057 271 138 138 0 chr17 61980228 61980293 -33292358 + Lx7 LINE L1 7607 7680 -16 7 1057 234 0 0 0 chr17 61980320 61980346 -33292305 + (TC)n Simple_repeat Simple_repeat 1 26 0 7 1057 558 79 0 0 chr17 61980346 61980421 -33292230 + (CA)n Simple_repeat Simple_repeat 1 76 0 7 1057 282 333 22 11 chr17 61980643 61980734 -33291917 - B4 SINE B4 -197 95 4 7 1057 387 0 0 0 chr17 61980753 61980796 -33291855 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 1057 3999 85 20 0 chr17 61980797 61981337 -33291314 - L1_Mus4 LINE L1 -6 6630 6080 7 1057 439 275 83 8 chr17 61981412 61981665 -33290986 + L1MC LINE L1 4418 4689 -1457 7 1057 3674 134 19 2 chr17 61981999 61982576 -33290075 + Lx LINE L1 6065 6651 -3 7 1057 246 333 52 7 chr17 61982601 61982755 -33289896 + L1MC LINE L1 4717 4877 -1269 7 1057 568 0 0 0 chr17 61982796 61982866 -33289785 + L1Md_F2 LINE L1 6501 6570 -12 7 1057 238 280 81 25 chr17 61982894 61983080 -33289571 + L1MA8 LINE L1 6064 6262 -29 7 1057 207 0 0 0 chr17 61983080 61983103 -33289548 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 1057 238 280 81 25 chr17 61983103 61983114 -33289537 + L1MA8 LINE L1 6263 6272 -19 7 1057 493 266 114 22 chr17 61983189 61983462 -33289189 + L1MC LINE L1 4964 5261 -885 7 1057 192 27 26 51 chr17 61983478 61983517 -33289134 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 7 1057 479 298 60 36 chr17 61983614 61983865 -33288786 + L1MC1 LINE L1 6052 6308 -25 7 1057 23 54 0 0 chr17 61984208 61984245 -33288406 + AT_rich Low_complexity Low_complexity 1 37 0 7 1057 786 136 0 0 chr17 61985040 61985172 -33287479 + (TTCC)n Simple_repeat Simple_repeat 3 134 0 7 1057 282 336 65 40 chr17 61986648 61986772 -33285879 - L2c LINE L2 -4 3383 3257 7 1057 353 310 94 44 chr17 61987162 61987410 -33285241 - L1MA5A LINE L1 -410 5887 5650 7 1057 234 0 0 0 chr17 61987410 61987436 -33285215 + (TA)n Simple_repeat Simple_repeat 2 27 0 7 1057 353 310 94 44 chr17 61987436 61987689 -33284962 - L1MA5A LINE L1 -648 5649 5361 7 1057 270 56 0 0 chr17 61987896 61987932 -33284719 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 7 1057 285 29 0 0 chr17 61988007 61988041 -33284610 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 7 1057 1690 270 55 12 chr17 61988501 61989085 -33283566 + Lx9 LINE L1 7019 7627 -17 7 1057 11395 203 39 72 chr17 61989501 61991502 -33281149 + Lx6 LINE L1 2658 4628 -1252 7 1057 507 60 0 0 chr17 61991502 61991569 -33281082 + (CA)n Simple_repeat Simple_repeat 1 67 0 7 1057 11395 204 40 70 chr17 61991569 61992945 -33279706 + Lx6 LINE L1 4629 5928 -1532 7 1057 4294 232 90 45 chr17 61992940 61994101 -33278550 + Lx6 LINE L1 6184 7397 -63 7 1057 207 0 0 0 chr17 61994101 61994124 -33278527 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 7 1057 268 279 25 0 chr17 61994216 61994295 -33278356 + Lx7 LINE L1 7219 7299 -397 7 1057 316 306 0 0 chr17 61994302 61994373 -33278278 + (CGTG)n Simple_repeat Simple_repeat 1 71 0 7 1057 291 54 0 0 chr17 61994373 61994410 -33278241 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1057 316 306 0 0 chr17 61994410 61994423 -33278228 + (CGTG)n Simple_repeat Simple_repeat 4 16 0 7 1057 22 70 0 0 chr17 61994616 61994659 -33277992 + AT_rich Low_complexity Low_complexity 1 43 0 7 1057 221 0 0 33 chr17 61995208 61995238 -33277413 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 7 1057 753 271 41 15 chr17 61995844 61996039 -33276612 - Lx5 LINE L1 -5 7045 6846 7 1057 674 258 6 13 chr17 61996036 61996193 -33276458 + Lx5 LINE L1 6705 6860 -190 7 1057 31 44 0 0 chr17 61996792 61996837 -33275814 + AT_rich Low_complexity Low_complexity 1 45 0 7 1058 26 30 0 0 chr17 61997240 61997273 -33275378 + AT_rich Low_complexity Low_complexity 1 33 0 7 1058 1801 37 0 0 chr17 61997635 61997890 -33274761 + L1_Mus1 LINE L1 6343 6567 0 7 1058 3521 228 68 8 chr17 61998149 61999051 -33273600 - Lx3C LINE L1 -2 6974 6019 7 1058 742 243 27 36 chr17 61999089 61999311 -33273340 + Lx4A LINE L1 6839 7058 0 7 1058 450 0 0 0 chr17 61999713 61999763 -33272888 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 1058 362 355 61 37 chr17 61999809 61999973 -33272678 - B4A SINE B4 -16 276 109 7 1058 2079 114 26 0 chr17 62000657 62000964 -33271687 + Lx3A LINE L1 6636 6950 -31 1 1058 26 0 0 0 chr17 62001066 62001092 -33271559 + AT_rich Low_complexity Low_complexity 1 26 0 2 1058 350 184 0 0 chr17 62001323 62001401 -33271250 - Lx5 LINE L1 -159 6899 6815 3 1058 231 316 0 0 chr17 62002335 62002414 -33270237 + (TATATG)n Simple_repeat Simple_repeat 3 81 0 4 1058 21 0 0 0 chr17 62002434 62002455 -33270196 + AT_rich Low_complexity Low_complexity 1 21 0 5 1058 1180 324 91 29 chr17 62002694 62003291 -33269360 - Lx8 LINE L1 -25 7448 6815 6 1058 21 36 0 0 chr17 62003840 62003868 -33268783 + AT_rich Low_complexity Low_complexity 1 28 0 7 1058 689 277 66 8 chr17 62004512 62004756 -33267895 + L1MC3 LINE L1 7170 7427 -358 8 1058 222 135 40 26 chr17 62007812 62007888 -33264763 + (TCTCTG)n Simple_repeat Simple_repeat 6 82 0 9 1058 183 204 0 0 chr17 62007879 62007923 -33264728 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1058 2509 135 12 0 chr17 62008128 62008535 -33264116 - Lx2B LINE L1 -812 5065 4654 1 1058 880 176 6 0 chr17 62008526 62008685 -33263966 + Lx2B LINE L1 5073 5232 -645 1 1058 1135 143 0 20 chr17 62008684 62008884 -33263767 + L1_Mus4 LINE L1 6416 6611 -25 1 1058 3825 244 105 32 chr17 62008905 62010157 -33262494 + Lx2B LINE L1 5638 6981 -19 1 1058 698 34 0 11 chr17 62010163 62010253 -33262398 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 1 1058 228 180 0 57 chr17 62010409 62010449 -33262202 + polypurine Low_complexity Low_complexity 3 40 0 1 1058 1110 130 0 0 chr17 62010449 62010626 -33262025 + (GGAGAA)n Simple_repeat Simple_repeat 3 179 0 1 1058 228 180 0 57 chr17 62010626 62010638 -33262013 + polypurine Low_complexity Low_complexity 41 52 0 1 1058 454 113 10 30 chr17 62011157 62011257 -33261394 - Lx2 LINE L1 -2 6995 6898 1 1058 586 308 14 7 chr17 62011298 62011442 -33261209 + B3A SINE B2 3 147 -51 1 1058 800 69 9 0 chr17 62011462 62011578 -33261073 + (TAGA)n Simple_repeat Simple_repeat 4 120 0 1 1058 237 62 41 20 chr17 62012223 62012272 -33260379 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1058 315 0 0 0 chr17 62013061 62013096 -33259555 + (TTTTA)n Simple_repeat Simple_repeat 5 39 0 2 1058 359 319 107 5 chr17 62013151 62013356 -33259295 - L1M5 LINE L1 -1390 4756 4531 2 1058 59 59 0 0 chr17 62014057 62014158 -33258493 + AT_rich Low_complexity Low_complexity 1 101 0 2 1058 23 33 0 0 chr17 62014471 62014501 -33258150 + AT_rich Low_complexity Low_complexity 1 30 0 2 1058 1639 205 35 16 chr17 62015147 62015519 -33257132 + L1_Mur3 LINE L1 3322 3700 -2180 2 1058 1590 242 0 27 chr17 62015517 62015845 -33256806 + Lx6 LINE L1 6417 6742 -718 2 1058 330 91 0 0 chr17 62015845 62015900 -33256751 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1058 320 0 25 0 chr17 62015900 62015939 -33256712 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 1058 1590 242 0 27 chr17 62015939 62015978 -33256673 + Lx6 LINE L1 6743 6774 -686 2 1058 5908 53 4 1 chr17 62016076 62016825 -33255826 + L1Md_F2 LINE L1 4836 5586 -297 2 1058 8157 39 2 5 chr17 62016826 62017810 -33254841 + L1Md_F2 LINE L1 5588 6568 -14 2 1058 247 87 0 21 chr17 62017810 62017857 -33254794 - MT-int LTR MaLR -111 987 942 3 1058 318 106 0 0 chr17 62018228 62018275 -33254376 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1058 433 176 39 0 chr17 62018363 62018465 -33254186 - Lx9 LINE L1 -7 7637 7532 3 1058 609 125 27 68 chr17 62019605 62019751 -33252900 - Lx3C LINE L1 -7 6969 6830 3 1058 1186 128 59 0 chr17 62019771 62019974 -33252677 - Lx3_Mus LINE L1 0 7009 6795 3 1058 4946 106 31 5 chr17 62019974 62020713 -33251938 + Lx3_Mus LINE L1 6049 6806 -203 3 1058 24 53 0 0 chr17 62021785 62021823 -33250828 + AT_rich Low_complexity Low_complexity 1 38 0 3 1058 216 61 30 0 chr17 62021827 62021860 -33250791 + MIRm SINE MIR 232 265 -11 3 1058 248 228 71 128 chr17 62022270 62022411 -33250240 - Charlie1a DNA MER1_type -556 899 767 3 1058 351 333 45 16 chr17 62022812 62023120 -33249531 - L1MA6 LINE L1 -415 5885 5569 3 1058 434 115 26 0 chr17 62023189 62023267 -33249384 + (TTCC)n Simple_repeat Simple_repeat 4 83 0 3 1058 324 0 0 0 chr17 62023287 62023323 -33249328 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 4 1058 248 192 179 0 chr17 62023666 62023744 -33248907 - L1MA6 LINE L1 -1143 5000 4909 3 1058 1874 160 97 3 chr17 62023807 62024158 -33248493 + ORR1B1 LTR MaLR 3 386 -8 4 1058 1111 307 133 13 chr17 62024178 62025265 -33247386 - L1MA6 LINE L1 -1303 4840 3623 3 1058 2586 279 45 87 chr17 62025265 62026151 -33246500 - Lx6 LINE L1 -13 7447 6599 4 1058 259 154 39 0 chr17 62026206 62026258 -33246393 - L1MA6 LINE L1 -2573 3570 3517 3 1058 22 70 0 0 chr17 62026398 62026441 -33246210 + AT_rich Low_complexity Low_complexity 1 43 0 4 1058 24 84 0 12 chr17 62026495 62026521 -33246130 + AT_rich Low_complexity Low_complexity 1 26 0 4 1058 2625 135 37 28 chr17 62026521 62026986 -33245665 + Lx2 LINE L1 6524 6992 -5 4 1058 24 84 0 12 chr17 62026986 62027043 -33245608 + AT_rich Low_complexity Low_complexity 1 57 0 4 1058 300 374 24 57 chr17 62027106 62027316 -33245335 - B4A SINE B4 -4 288 86 4 1058 24 0 0 0 chr17 62027316 62027340 -33245311 + AT_rich Low_complexity Low_complexity 1 24 0 4 1058 578 263 55 125 chr17 62027350 62027820 -33244831 - RLTR12B LTR ERVK -25 334 1 4 1058 43 81 0 0 chr17 62027853 62027952 -33244699 + AT_rich Low_complexity Low_complexity 1 99 0 5 1058 384 22 0 0 chr17 62028078 62028123 -33244528 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 1058 405 0 0 0 chr17 62029337 62029382 -33243269 + (TA)n Simple_repeat Simple_repeat 1 45 0 5 1058 243 0 0 0 chr17 62029382 62029408 -33243243 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 1058 504 48 0 0 chr17 62029532 62029595 -33243056 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 1058 1132 68 0 0 chr17 62030956 62031102 -33241549 + B1_Mus2 SINE Alu 2 147 0 5 1058 300 191 49 62 chr17 62031258 62031503 -33241148 + (TATAA)n Simple_repeat Simple_repeat 1 241 0 5 1058 2081 120 12 25 chr17 62033900 62034225 -33238426 + Lx2 LINE L1 6677 6997 0 5 1058 207 200 0 0 chr17 62035410 62035455 -33237196 + A-rich Low_complexity Low_complexity 1 45 0 5 1058 426 20 0 0 chr17 62035472 62035523 -33237128 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1058 451 281 102 36 chr17 62035608 62035774 -33236877 + B3 SINE B2 4 180 -36 6 1058 207 0 0 0 chr17 62036311 62036334 -33236317 + (A)n Simple_repeat Simple_repeat 1 23 0 6 1058 181 208 28 0 chr17 62036751 62036823 -33235828 + (TA)n Simple_repeat Simple_repeat 1 74 0 6 1058 1135 76 0 0 chr17 62037283 62037427 -33235224 + B1_Mus1 SINE Alu 5 148 0 6 1058 353 322 97 13 chr17 62038536 62038690 -33233961 + B4A SINE B4 103 269 -23 6 1058 230 202 115 35 chr17 62038889 62038976 -33233675 - Lx9 LINE L1 -25 7619 7526 6 1058 279 0 0 0 chr17 62038979 62039010 -33233641 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 1058 2462 281 18 27 chr17 62039013 62039753 -33232898 - Lx9 LINE L1 -179 7465 6733 6 1058 579 342 5 36 chr17 62040045 62040239 -33232412 - B3 SINE B2 -2 214 27 6 1058 347 316 86 35 chr17 62040328 62040525 -33232126 - Lx8 LINE L1 -94 7379 7173 6 1058 706 269 76 0 chr17 62041072 62041373 -33231278 + Lx9 LINE L1 7315 7638 -6 6 1058 1875 80 115 3 chr17 62042296 62042584 -33230067 - RLTR46 LTR ERVK 0 320 1 7 1058 262 170 0 0 chr17 62042665 62042718 -33229933 + Lx9 LINE L1 7547 7599 -45 7 1058 331 294 39 53 chr17 62042798 62043006 -33229645 + Lx8 LINE L1 7267 7471 -2 7 1058 269 164 218 0 chr17 62043022 62043077 -33229574 + Lx2A1 LINE L1 6662 6728 -280 7 1058 420 327 9 18 chr17 62043077 62043189 -33229462 - B3 SINE B2 -104 112 2 7 1058 447 316 54 54 chr17 62043193 62043414 -33229237 + MLT2B3 LTR ERVL 3 223 -331 7 1058 213 240 31 20 chr17 62043691 62043789 -33228862 + (TA)n Simple_repeat Simple_repeat 2 100 0 7 1058 450 0 0 0 chr17 62044346 62044396 -33228255 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 1058 1009 254 33 45 chr17 62044859 62045193 -33227458 - Lx6 LINE L1 0 7696 7367 7 1058 7798 104 32 1 chr17 62045178 62047062 -33225589 + L1_Mus3 LINE L1 4690 6633 -5 7 1058 219 125 40 40 chr17 62047096 62047146 -33225505 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 8 1058 3524 244 40 11 chr17 62047185 62047624 -33225027 - Lx6 LINE L1 -356 7340 6887 7 1058 1909 155 16 0 chr17 62047624 62047928 -33224723 + RLTR27 LTR ERVK 1 309 0 8 1058 3524 238 59 12 chr17 62047928 62048557 -33224094 - Lx6 LINE L1 -574 6886 6223 7 1058 6684 145 37 15 chr17 62048562 62050255 -33222396 + Lx LINE L1 4930 6654 0 8 1058 301 213 134 78 chr17 62050275 62050456 -33222195 + RMER16 LTR ERVK 201 375 -158 8 1058 362 248 18 100 chr17 62050460 62050630 -33222021 + RMER16 LTR ERVK 287 442 -91 8 1058 535 191 0 22 chr17 62050630 62050769 -33221882 + (TATATG)n Simple_repeat Simple_repeat 2 137 0 8 1058 1417 265 57 12 chr17 62050769 62051258 -33221393 - Lx7 LINE L1 -1498 6198 5688 8 1058 345 329 97 77 chr17 62053045 62053200 -33219451 + RSINE1 SINE B4 8 165 0 8 1058 420 318 11 6 chr17 62053237 62053414 -33219237 + (CA)n Simple_repeat Simple_repeat 1 178 0 8 1058 378 279 83 44 chr17 62053512 62053741 -33218910 - RLTR15 LTR ERVK -30 329 92 8 1058 262 291 147 5 chr17 62053744 62053934 -33218717 + Lx9 LINE L1 7385 7601 -43 9 1058 245 89 22 0 chr17 62054150 62054195 -33218456 + (TTTTTG)n Simple_repeat Simple_repeat 4 49 0 9 1058 719 234 50 106 chr17 62054230 62054646 -33218005 + RLTR11B LTR ERVK 11 392 -135 9 1058 264 261 79 56 chr17 62054925 62055051 -33217600 + Lx8 LINE L1 6970 7098 -375 9 1058 197 0 0 67 chr17 62055469 62055499 -33217152 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 9 1058 306 354 61 8 chr17 62055514 62055532 -33217119 + B1F1 SINE Alu 6 143 -6 9 1058 491 295 0 9 chr17 62055532 62055645 -33217006 + ID_B1 SINE B4 107 218 -6 9 1058 816 205 63 80 chr17 62056440 62056791 -33215860 + RLTRETN_Mm LTR ERVK 9 403 0 9 1058 203 357 14 0 chr17 62056879 62056949 -33215702 - MIRm SINE MIR -2 274 204 9 1058 396 367 34 53 chr17 62057342 62057549 -33215102 + B3A SINE B2 8 210 -6 9 1058 432 275 62 55 chr17 62057581 62057810 -33214841 + Lx8 LINE L1 5662 5927 -1546 1 1058 343 297 53 40 chr17 62058110 62058261 -33214390 - L1MCc LINE L1 -5978 445 293 1 1058 258 193 186 40 chr17 62058360 62058484 -33214167 - L1MCc LINE L1 -6257 166 25 1 1058 4228 130 11 41 chr17 62058522 62058639 -33214012 - L1_Mur1 LINE L1 -1103 4783 4667 1 1058 4509 87 80 3 chr17 62058639 62059306 -33213345 + L1_Mus3 LINE L1 5917 6634 -4 1 1058 4228 130 11 41 chr17 62059306 62059949 -33212702 - L1_Mur1 LINE L1 -1220 4666 4046 1 1058 3141 160 6 4 chr17 62059934 62060481 -33212170 - L1_Mur1 LINE L1 -3004 2882 2335 1 1058 2214 160 33 15 chr17 62060482 62060875 -33211776 + Lx3C LINE L1 6524 6923 -53 1 1058 23 101 0 0 chr17 62061620 62061699 -33210952 + AT_rich Low_complexity Low_complexity 1 79 0 1 1058 21 0 0 0 chr17 62061826 62061847 -33210804 + AT_rich Low_complexity Low_complexity 1 21 0 1 1058 34 55 0 0 chr17 62062349 62062404 -33210247 + AT_rich Low_complexity Low_complexity 1 55 0 1 1058 450 0 0 0 chr17 62063249 62063299 -33209352 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1058 24 0 0 0 chr17 62064034 62064058 -33208593 + AT_rich Low_complexity Low_complexity 1 24 0 1 1058 384 376 0 0 chr17 62066116 62066217 -33206434 + B1_Mur2 SINE Alu 2 102 -47 1 1058 1046 204 101 69 chr17 62066982 62067227 -33205424 + L1_Mur2 LINE L1 920 1189 -5897 1 1058 459 0 0 0 chr17 62067227 62067278 -33205373 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 1 1058 1046 204 101 69 chr17 62067278 62067438 -33205213 + L1_Mur2 LINE L1 1190 1338 -5748 1 1058 4607 191 126 66 chr17 62067441 62068072 -33204579 + L1_Mur2 LINE L1 2798 3573 -2304 1 1058 6737 33 0 0 chr17 62068072 62068866 -33203785 + L1Md_A LINE L1 5789 6582 0 1 1058 4607 191 126 66 chr17 62068866 62069598 -33203053 + L1_Mur2 LINE L1 3574 4273 -1604 1 1058 315 49 0 0 chr17 62069598 62069639 -33203012 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1058 4607 191 126 66 chr17 62069639 62069722 -33202929 + L1_Mur2 LINE L1 4274 4332 -1545 1 1058 1023 150 0 164 chr17 62069719 62069982 -33202669 + L1_Mm LINE L1 5227 5446 -437 1 1058 262 264 61 103 chr17 62070025 62070190 -33202461 - RMER15 LTR ERVL -414 161 4 1 1058 207 0 0 0 chr17 62070210 62070233 -33202418 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 1058 485 238 6 0 chr17 62070614 62070778 -33201873 + (CA)n Simple_repeat Simple_repeat 2 166 0 1 1058 295 264 11 33 chr17 62071025 62071115 -33201536 + B2_Mm2 SINE B2 2 89 -106 1 1058 304 291 58 36 chr17 62071247 62071386 -33201265 - B1F SINE Alu -1 148 7 1 1058 797 177 0 13 chr17 62071653 62071802 -33200849 + B1_Mus1 SINE Alu 1 147 -1 1 1058 2546 249 95 18 chr17 62072393 62073237 -33199414 + RCHARR1 DNA MER1_type 1 909 -65 1 1058 1360 262 32 42 chr17 62073245 62073550 -33199101 + ORR1D1 LTR MaLR 1 305 -69 1 1058 1114 82 29 0 chr17 62073550 62073720 -33198931 - L1_Mus3 LINE L1 -7 6631 6457 1 1058 1360 262 32 42 chr17 62073720 62073792 -33198859 + ORR1D1 LTR MaLR 306 374 0 1 1058 251 329 49 72 chr17 62073797 62073912 -33198739 - L1_Mur3 LINE L1 -335 5542 5440 1 1058 468 0 0 0 chr17 62073912 62073964 -33198687 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 1058 420 283 52 16 chr17 62073964 62074159 -33198492 - L1_Mur3 LINE L1 -440 5440 5240 1 1058 251 400 29 0 chr17 62074162 62074267 -33198384 - B3 SINE B2 -9 207 100 1 1058 1276 286 124 77 chr17 62074302 62074883 -33197768 + Charlie12 DNA MER1_type 2070 2701 -172 1 1058 332 0 0 44 chr17 62074883 62074928 -33197723 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 1 1058 1092 59 0 0 chr17 62074928 62075064 -33197587 - B1_Mus2 SINE Alu -11 136 1 1 1058 1276 286 124 77 chr17 62075064 62075224 -33197427 + Charlie12 DNA MER1_type 2702 2846 -27 1 1058 31 26 0 0 chr17 62075588 62075626 -33197025 + AT_rich Low_complexity Low_complexity 1 38 0 1 1058 26 74 0 0 chr17 62075889 62075943 -33196708 + AT_rich Low_complexity Low_complexity 1 54 0 1 1058 23 54 0 0 chr17 62076824 62076861 -33195790 + AT_rich Low_complexity Low_complexity 1 37 0 1 1058 685 297 84 39 chr17 62076935 62077219 -33195432 + L3 LINE CR1 3190 3486 -1003 1 1058 282 29 0 0 chr17 62077416 62077451 -33195200 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 1 1058 447 52 0 0 chr17 62077453 62077511 -33195140 + (CCA)n Simple_repeat Simple_repeat 1 58 0 1 1058 308 266 350 14 chr17 62077850 62078131 -33194520 - Lx8 LINE L1 -1044 6429 6055 1 1058 588 319 73 20 chr17 62078143 62078444 -33194207 + Lx8 LINE L1 6437 6753 -720 1 1058 237 33 0 0 chr17 62078742 62078772 -33193879 + (TTTTTG)n Simple_repeat Simple_repeat 1 30 0 1 1058 1178 41 7 0 chr17 62078772 62078918 -33193733 - B1_Mus1 SINE Alu -1 147 1 1 1058 25 0 0 0 chr17 62079891 62079916 -33192735 + AT_rich Low_complexity Low_complexity 1 25 0 1 1058 244 271 30 30 chr17 62080031 62080130 -33192521 + L1MD LINE L1 5081 5179 -967 1 1058 22 35 0 0 chr17 62080326 62080355 -33192296 + AT_rich Low_complexity Low_complexity 1 29 0 1 1058 233 77 51 0 chr17 62080441 62080480 -33192171 + (TTTC)n Simple_repeat Simple_repeat 3 43 0 1 1058 8175 155 19 25 chr17 62080480 62082089 -33190562 - L1_Mur2 LINE L1 -1225 4652 3055 1 1058 498 136 0 0 chr17 62082101 62082182 -33190469 + (TCC)n Simple_repeat Simple_repeat 1 81 0 1 1058 25 0 0 0 chr17 62082670 62082695 -33189956 + AT_rich Low_complexity Low_complexity 1 25 0 1 1058 476 194 8 30 chr17 62082704 62082837 -33189814 - Lx3B LINE L1 -4 6969 6840 1 1058 234 0 0 0 chr17 62082837 62082863 -33189788 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1058 8496 59 1 1 chr17 62082998 62084756 -33187895 - L1Md_F2 LINE L1 -12 6570 4812 1 1058 728 87 10 0 chr17 62084758 62084861 -33187790 - Lx3B LINE L1 -151 6822 6719 1 1058 21 0 0 0 chr17 62084976 62084997 -33187654 + AT_rich Low_complexity Low_complexity 1 21 0 1 1058 4804 235 34 12 chr17 62085230 62086366 -33186285 + Lx7 LINE L1 6191 7350 -346 1 1058 345 47 0 0 chr17 62086691 62086734 -33185917 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1058 512 174 86 17 chr17 62086786 62086903 -33185748 + Lx7 LINE L1 7572 7696 0 1 1058 35398 35 0 0 chr17 62087400 62092850 -33179801 + L1Md_T LINE L1 43 5589 -297 1 1058 9005 4 0 0 chr17 62092850 62093846 -33178805 + L1Md_T LINE L1 5590 6585 0 1 1058 21 0 0 0 chr17 62093890 62093911 -33178740 + AT_rich Low_complexity Low_complexity 1 21 0 1 1058 225 0 0 0 chr17 62094552 62094577 -33178074 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1 1058 293 303 53 76 chr17 62094675 62094807 -33177844 - ID_B1 SINE B4 -10 214 86 1 1058 387 0 0 0 chr17 62096229 62096272 -33176379 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 1058 1106 202 26 22 chr17 62096768 62096890 -33175761 - RMER1A Other Other 0 1030 910 1 1058 396 0 0 0 chr17 62096890 62096934 -33175717 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1058 1106 202 26 22 chr17 62096934 62097084 -33175567 - RMER1A Other Other -121 909 758 1 1058 227 345 112 0 chr17 62097084 62097200 -33175451 - RMER1A Other Other -727 303 175 1 1058 25 75 0 0 chr17 62097368 62097421 -33175230 + AT_rich Low_complexity Low_complexity 1 53 0 1 1058 369 0 0 0 chr17 62098059 62098100 -33174551 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 1058 845 72 21 14 chr17 62098126 62098266 -33174385 + (TAGA)n Simple_repeat Simple_repeat 4 144 0 1 1058 235 87 21 42 chr17 62098270 62098318 -33174333 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 1 1058 2199 291 95 45 chr17 62098319 62099482 -33173169 - Lx8 LINE L1 -203 7270 6049 1 1058 23 0 0 0 chr17 62100804 62100827 -33171824 + AT_rich Low_complexity Low_complexity 1 23 0 1 1058 25 0 0 0 chr17 62101307 62101332 -33171319 + AT_rich Low_complexity Low_complexity 1 25 0 1 1058 219 36 0 0 chr17 62101704 62101732 -33170919 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1 1058 2204 207 145 13 chr17 62101897 62102119 -33170532 - L1_Mur3 LINE L1 -394 5486 5241 1 1058 330 91 0 0 chr17 62102119 62102174 -33170477 + (TTAG)n Simple_repeat Simple_repeat 2 56 0 1 1058 2204 207 145 13 chr17 62102174 62102559 -33170092 - L1_Mur3 LINE L1 -640 5240 4801 1 1058 7377 166 15 18 chr17 62102549 62104085 -33168566 + Lx2B LINE L1 5479 7000 0 1 1058 221 187 54 21 chr17 62104477 62104570 -33168081 + (TA)n Simple_repeat Simple_repeat 2 97 0 1 1058 26 0 0 0 chr17 62105220 62105246 -33167405 + AT_rich Low_complexity Low_complexity 1 26 0 1 1058 24 32 0 0 chr17 62106193 62106224 -33166427 + AT_rich Low_complexity Low_complexity 1 31 0 1 1058 26 93 0 0 chr17 62106425 62106500 -33166151 + AT_rich Low_complexity Low_complexity 1 75 0 1 1058 24 91 0 0 chr17 62106545 62106611 -33166040 + AT_rich Low_complexity Low_complexity 1 66 0 1 1058 216 0 0 0 chr17 62106707 62106731 -33165920 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 1058 203 280 92 51 chr17 62106749 62106847 -33165804 - MIRb SINE MIR -60 208 107 1 1058 245 206 0 10 chr17 62107430 62107533 -33165118 + (TG)n Simple_repeat Simple_repeat 1 102 0 1 1058 23 54 0 0 chr17 62107827 62107864 -33164787 + AT_rich Low_complexity Low_complexity 1 37 0 1 1058 24 0 0 0 chr17 62108271 62108295 -33164356 + AT_rich Low_complexity Low_complexity 1 24 0 1 1058 382 377 17 33 chr17 62110215 62110396 -33162255 + MLT1N2 LTR MaLR 312 489 -73 1 1058 201 369 24 0 chr17 62111049 62111133 -33161518 - L2c LINE L2 -55 3332 3247 1 1058 22 0 0 0 chr17 62111203 62111225 -33161426 + AT_rich Low_complexity Low_complexity 1 22 0 1 1058 686 348 22 22 chr17 62111316 62111633 -33161018 - Lx8 LINE L1 -138 7335 7019 1 1058 290 331 0 6 chr17 62111727 62111885 -33160766 + CT-rich Low_complexity Low_complexity 2 158 0 1 1058 259 280 35 64 chr17 62111888 62112029 -33160622 - Lx8 LINE L1 -443 7030 6894 1 1058 1909 122 95 0 chr17 62113259 62113563 -33159088 + Lx2B LINE L1 6668 7000 0 1 1058 584 280 65 94 chr17 62113838 62114039 -33158612 + B3A SINE B2 1 195 0 1 1058 23 68 0 0 chr17 62114811 62114855 -33157796 + AT_rich Low_complexity Low_complexity 1 44 0 1 1058 216 97 0 0 chr17 62115132 62115163 -33157488 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1058 341 127 127 0 chr17 62115583 62115654 -33156997 - L1_Mus2 LINE L1 -6 6560 6481 1 1058 233 370 38 38 chr17 62115655 62115787 -33156864 - MLT1F2 LTR MaLR -82 478 347 1 1058 214 255 0 0 chr17 62115998 62116045 -33156606 + GA-rich Low_complexity Low_complexity 1 47 0 1 1058 231 36 0 0 chr17 62116306 62116334 -33156317 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 1058 279 0 0 0 chr17 62116334 62116364 -33156287 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1058 1862 237 3 66 chr17 62116650 62117229 -33155422 - Lx7 LINE L1 0 7696 7154 1 1058 263 186 17 0 chr17 62117303 62117362 -33155289 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 1058 689 85 0 9 chr17 62117620 62117727 -33154924 + (TTCC)n Simple_repeat Simple_repeat 4 109 0 1 1058 479 17 0 16 chr17 62117727 62117788 -33154863 + (TC)n Simple_repeat Simple_repeat 2 61 0 1 1059 8617 76 2 0 chr17 62167794 62168949 -33103702 - L1Md_F LINE L1 -563 5320 4164 2 1059 10838 126 33 30 chr17 62168945 62171414 -33101237 - L1Md_F LINE L1 -3159 2724 273 2 1059 405 0 0 0 chr17 62171776 62171821 -33100830 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1059 315 71 0 0 chr17 62173029 62173071 -33099580 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1059 3307 33 8 0 chr17 62173669 62174062 -33098589 + MTA_Mm LTR MaLR 1 396 0 2 1059 2938 101 0 12 chr17 62174176 62174588 -33098063 + MTB_Mm LTR MaLR 1 407 0 2 1059 180 286 118 39 chr17 62174843 62174996 -33097655 - L3 LINE CR1 -908 3581 3417 2 1059 412 222 81 0 chr17 62175635 62175734 -33096917 - PB1D9 SINE Alu -8 112 6 2 1059 449 399 61 30 chr17 62175747 62175820 -33096831 + MLT2B3 LTR ERVL 15 88 -466 2 1059 2193 102 6 74 chr17 62175820 62175891 -33096760 - ORR1A2 LTR MaLR 0 327 273 2 1059 1165 62 0 0 chr17 62175891 62176036 -33096615 - B1_Mus1 SINE Alu -2 146 2 2 1059 2193 102 6 74 chr17 62176036 62176315 -33096336 - ORR1A2 LTR MaLR -55 272 1 2 1059 449 399 61 30 chr17 62176315 62176714 -33095937 + MLT2B3 LTR ERVL 89 501 -53 2 1059 757 70 30 15 chr17 62176717 62176848 -33095803 + (TCTA)n Simple_repeat Simple_repeat 3 135 0 2 1059 22 0 0 0 chr17 62177387 62177409 -33095242 + AT_rich Low_complexity Low_complexity 1 22 0 2 1059 1263 204 52 21 chr17 62177534 62177820 -33094831 + Lx5 LINE L1 6753 7047 -3 2 1059 450 0 0 0 chr17 62178419 62178469 -33094182 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 1059 332 330 44 27 chr17 62178701 62178838 -33093813 + B1F2 SINE Alu 2 141 -8 2 1059 221 286 73 32 chr17 62179111 62179234 -33093417 - MIR SINE MIR -26 236 109 2 1059 368 48 75 28 chr17 62179338 62179445 -33093206 + T-rich Low_complexity Low_complexity 1 112 0 2 1059 23 0 0 0 chr17 62180002 62180025 -33092626 + AT_rich Low_complexity Low_complexity 1 23 0 2 1059 643 330 0 19 chr17 62180543 62180759 -33091892 - B3 SINE B2 -2 214 3 2 1059 225 0 0 0 chr17 62181778 62181803 -33090848 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1059 564 271 201 29 chr17 62182089 62182704 -33089947 + L1MA8 LINE L1 5478 6215 -76 2 1059 610 299 75 33 chr17 62182830 62183044 -33089607 - MER58A DNA MER1_type -1 223 1 2 1059 1242 241 59 67 chr17 62184125 62184481 -33088170 + ORR1E LTR MaLR 1 353 -6 2 1059 391 269 73 22 chr17 62184980 62185117 -33087534 + B1F SINE Alu 1 144 -5 2 1059 330 26 0 0 chr17 62185321 62185360 -33087291 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1059 522 273 37 15 chr17 62185373 62185507 -33087144 - RSINE1 SINE B4 -24 141 5 2 1059 476 292 76 33 chr17 62186622 62186806 -33085845 + B3A SINE B2 1 192 -6 2 1059 1324 107 5 0 chr17 62186863 62187050 -33085601 - B2_Mm2 SINE B2 -7 188 1 2 1059 527 273 109 67 chr17 62187536 62187807 -33084844 - L1M2 LINE L1 -573 5727 5454 2 1059 624 267 205 7 chr17 62187807 62188109 -33084542 - ORR1D2 LTR MaLR -4 366 5 2 1059 527 276 129 43 chr17 62188109 62188396 -33084255 - L1M2 LINE L1 -847 5453 5137 2 1059 271 186 22 34 chr17 62188432 62188521 -33084130 - Lx6 LINE L1 -26 7434 7347 2 1059 919 314 56 12 chr17 62188619 62189212 -33083439 - L1M2 LINE L1 -1142 5001 4383 2 1059 23 0 0 0 chr17 62189288 62189311 -33083340 + AT_rich Low_complexity Low_complexity 1 23 0 2 1059 280 330 57 67 chr17 62189311 62189642 -33083009 - L1M2 LINE L1 -1771 4369 4042 2 1059 207 0 0 0 chr17 62189642 62189665 -33082986 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1059 241 387 0 9 chr17 62190761 62190868 -33081783 - MLT2B1 LTR ERVL -68 499 394 2 1059 1955 129 29 6 chr17 62190871 62190918 -33081733 - ORR1A2 LTR MaLR -8 319 273 2 1059 351 0 0 0 chr17 62190918 62190957 -33081694 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 1059 1130 65 0 0 chr17 62190957 62191096 -33081555 - B1_Mus1 SINE Alu -9 139 1 2 1059 1955 129 29 6 chr17 62191096 62191359 -33081292 - ORR1A2 LTR MaLR -55 272 2 2 1059 252 143 0 0 chr17 62191971 62192013 -33080638 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 1059 351 0 0 0 chr17 62192285 62192324 -33080327 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1059 315 0 0 0 chr17 62192875 62192910 -33079741 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1059 25 0 0 0 chr17 62194610 62194635 -33078016 + AT_rich Low_complexity Low_complexity 1 25 0 2 1059 240 35 0 0 chr17 62195192 62195221 -33077430 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 1059 1326 234 208 30 chr17 62195476 62195947 -33076704 + RMER2 LTR ERV1 1 555 -12 2 1059 4075 197 83 27 chr17 62196409 62197530 -33075121 - Lx7 LINE L1 -1529 6167 4985 2 1059 2755 234 109 11 chr17 62197527 62198840 -33073811 - Lx7 LINE L1 -3593 2287 846 2 1059 322 147 0 29 chr17 62198909 62198979 -33073672 + CT-rich Low_complexity Low_complexity 1 68 0 2 1059 451 260 125 83 chr17 62199370 62199538 -33073113 + B3A SINE B2 24 198 0 2 1059 837 119 13 7 chr17 62201430 62201582 -33071069 + (TTTC)n Simple_repeat Simple_repeat 1 153 0 2 1059 510 17 0 0 chr17 62202396 62202455 -33070196 + (TA)n Simple_repeat Simple_repeat 2 60 0 2 1059 189 371 58 36 chr17 62203189 62203326 -33069325 - MIRb SINE MIR -126 142 3 2 1059 1384 128 12 25 chr17 62204634 62204874 -33067777 - Lx3B LINE L1 -3 6970 6734 2 1059 183 129 0 0 chr17 62204969 62205000 -33067651 + (TATG)n Simple_repeat Simple_repeat 2 32 0 2 1059 379 149 48 28 chr17 62204993 62205138 -33067513 + (TCTA)n Simple_repeat Simple_repeat 3 150 0 2 1059 1316 279 100 19 chr17 62207025 62207496 -33065155 - MMAR1 DNA Mariner -749 537 29 2 1059 22 0 0 0 chr17 62207519 62207541 -33065110 + AT_rich Low_complexity Low_complexity 1 22 0 2 1059 213 229 88 26 chr17 62207710 62207820 -33064831 + MIR3 SINE MIR 81 198 -10 2 1059 212 283 32 32 chr17 62209270 62209332 -33063319 - MIRm SINE MIR -115 161 100 2 1059 521 298 8 0 chr17 62209978 62210109 -33062542 + B1_Mus1 SINE Alu 10 141 -7 2 1059 203 0 37 0 chr17 62210110 62210137 -33062514 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 2 1059 693 151 0 0 chr17 62210893 62211012 -33061639 + (TA)n Simple_repeat Simple_repeat 2 120 0 2 1059 1447 46 5 60 chr17 62211374 62211605 -33061046 + L1_Mus1 LINE L1 6370 6567 0 2 1059 1571 44 54 0 chr17 62211674 62211878 -33060773 + L1Md_F3 LINE L1 6356 6570 -14 2 1059 267 31 0 0 chr17 62213238 62213270 -33059381 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 1059 713 256 46 120 chr17 62213509 62213659 -33058992 - L1MA6 LINE L1 -308 5992 5841 2 1059 2073 169 46 3 chr17 62213659 62214032 -33058619 + ORR1B1 LTR MaLR 3 391 -3 2 1059 6971 188 45 5 chr17 62214036 62214305 -33058346 + ORR1B1-int LTR MaLR 2 285 -1224 2 1059 210 37 0 0 chr17 62214305 62214332 -33058319 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1059 6971 188 45 5 chr17 62214332 62215511 -33057140 + ORR1B1-int LTR MaLR 286 1508 -1 2 1059 1947 184 34 10 chr17 62215511 62215896 -33056755 + ORR1B1 LTR MaLR 1 394 0 2 1059 713 256 46 120 chr17 62215896 62215999 -33056652 - L1MA6 LINE L1 -460 5840 5765 2 1059 519 229 139 0 chr17 62215999 62216121 -33056530 - B1F SINE Alu -8 141 3 2 1059 713 256 46 120 chr17 62216121 62216294 -33056357 - L1MA6 LINE L1 -536 5764 5596 2 1059 405 58 0 0 chr17 62216471 62216523 -33056128 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 1059 352 130 29 0 chr17 62216660 62216729 -33055922 + (TATATG)n Simple_repeat Simple_repeat 1 71 0 2 1059 310 106 21 0 chr17 62216741 62216788 -33055863 - L1P5 LINE L1 -516 5640 5593 2 1059 354 45 0 0 chr17 62216819 62216863 -33055788 + (TTTTC)n Simple_repeat Simple_repeat 2 45 0 2 1059 8515 135 30 22 chr17 62217019 62218688 -33053963 - Lx3_Mus LINE L1 0 7009 5585 2 1059 21 0 0 0 chr17 62218921 62218942 -33053709 + AT_rich Low_complexity Low_complexity 1 21 0 2 1059 728 87 10 0 chr17 62219057 62219160 -33053491 + Lx3B LINE L1 6719 6822 -151 2 1059 6258 58 0 0 chr17 62219162 62219937 -33052714 + L1Md_F2 LINE L1 4812 5586 -297 2 1059 7846 55 2 1 chr17 62219937 62220920 -33051731 + L1Md_F2 LINE L1 5587 6570 -12 2 1059 243 0 0 0 chr17 62221055 62221082 -33051569 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1059 476 194 8 30 chr17 62221082 62221215 -33051436 + Lx3B LINE L1 6840 6969 -4 2 1059 25 0 0 0 chr17 62221224 62221249 -33051402 + AT_rich Low_complexity Low_complexity 1 25 0 2 1059 498 136 0 0 chr17 62221737 62221818 -33050833 + (GGA)n Simple_repeat Simple_repeat 1 81 0 2 1059 8175 155 19 25 chr17 62221830 62223439 -33049212 + L1_Mur2 LINE L1 3055 4652 -1225 2 1059 233 77 51 0 chr17 62223439 62223478 -33049173 + (GAAA)n Simple_repeat Simple_repeat 3 43 0 2 1059 22 35 0 0 chr17 62223564 62223593 -33049058 + AT_rich Low_complexity Low_complexity 1 29 0 2 1059 244 271 30 30 chr17 62223789 62223888 -33048763 - L1MD LINE L1 -967 5179 5081 2 1059 25 0 0 0 chr17 62224003 62224028 -33048623 + AT_rich Low_complexity Low_complexity 1 25 0 2 1059 1178 41 7 0 chr17 62225001 62225147 -33047504 + B1_Mus1 SINE Alu 1 147 -1 2 1059 237 33 0 0 chr17 62225147 62225177 -33047474 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 2 1059 588 319 73 20 chr17 62225475 62225776 -33046875 - Lx8 LINE L1 -720 6753 6437 2 1059 308 266 350 14 chr17 62225788 62226069 -33046582 + Lx8 LINE L1 6055 6429 -1044 2 1059 447 52 0 0 chr17 62226408 62226466 -33046185 + (TGG)n Simple_repeat Simple_repeat 1 58 0 2 1059 282 29 0 0 chr17 62226468 62226503 -33046148 + (TCTG)n Simple_repeat Simple_repeat 4 38 0 2 1059 685 297 84 39 chr17 62226700 62226984 -33045667 - L3 LINE CR1 -1003 3486 3190 2 1059 23 54 0 0 chr17 62227058 62227095 -33045556 + AT_rich Low_complexity Low_complexity 1 37 0 2 1059 26 74 0 0 chr17 62227976 62228030 -33044621 + AT_rich Low_complexity Low_complexity 1 54 0 2 1059 31 26 0 0 chr17 62228293 62228331 -33044320 + AT_rich Low_complexity Low_complexity 1 38 0 2 1059 1276 286 124 77 chr17 62228695 62228855 -33043796 - Charlie12 DNA MER1_type -26 2847 2702 2 1059 1092 59 0 0 chr17 62228855 62228991 -33043660 + B1_Mus2 SINE Alu 1 136 -11 2 1059 332 0 0 44 chr17 62228991 62229036 -33043615 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 2 1059 1276 286 124 77 chr17 62229036 62229617 -33043034 - Charlie12 DNA MER1_type -172 2701 2071 2 1059 251 400 29 0 chr17 62229652 62229757 -33042894 + B3 SINE B2 100 207 -9 2 1059 420 283 52 16 chr17 62229760 62229955 -33042696 + L1_Mur3 LINE L1 5240 5440 -440 2 1059 468 0 0 0 chr17 62229955 62230007 -33042644 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 1059 251 329 49 72 chr17 62230007 62230122 -33042529 + L1_Mur3 LINE L1 5440 5542 -335 2 1059 1360 262 32 42 chr17 62230127 62230199 -33042452 - ORR1D1 LTR MaLR 0 374 306 2 1059 1114 82 29 0 chr17 62230199 62230369 -33042282 + L1_Mus3 LINE L1 6457 6631 -7 2 1059 1360 262 32 42 chr17 62230369 62230674 -33041977 - ORR1D1 LTR MaLR -69 305 1 2 1059 2546 249 95 18 chr17 62230682 62231526 -33041125 - RCHARR1 DNA MER1_type -65 909 1 3 1059 797 177 0 13 chr17 62232117 62232266 -33040385 - B1_Mus1 SINE Alu -1 147 1 3 1059 304 291 58 36 chr17 62232533 62232672 -33039979 + B1F SINE Alu 7 148 -1 3 1059 295 264 11 33 chr17 62232804 62232894 -33039757 - B2_Mm2 SINE B2 -106 89 2 3 1059 485 238 6 0 chr17 62233141 62233305 -33039346 + (TG)n Simple_repeat Simple_repeat 2 166 0 3 1059 207 0 0 0 chr17 62233686 62233709 -33038942 + (TA)n Simple_repeat Simple_repeat 2 24 0 3 1059 262 264 61 103 chr17 62233729 62233894 -33038757 + RMER15 LTR ERVL 4 161 -414 3 1059 1023 150 0 164 chr17 62233937 62234200 -33038451 - L1_Mm LINE L1 -437 5446 5227 3 1059 4607 191 126 66 chr17 62234197 62234280 -33038371 - L1_Mur2 LINE L1 -1545 4332 4274 3 1059 315 49 0 0 chr17 62234280 62234321 -33038330 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1059 4607 191 126 66 chr17 62234321 62235053 -33037598 - L1_Mur2 LINE L1 -1604 4273 3574 3 1059 6737 33 0 0 chr17 62235053 62235847 -33036804 - L1Md_A LINE L1 0 6582 5789 3 1059 4607 191 126 66 chr17 62235847 62236478 -33036173 - L1_Mur2 LINE L1 -2304 3573 2798 3 1059 1046 204 101 69 chr17 62236481 62236641 -33036010 - L1_Mur2 LINE L1 -5748 1338 1190 3 1059 459 0 0 0 chr17 62236641 62236692 -33035959 + (TTTC)n Simple_repeat Simple_repeat 2 52 0 3 1059 1046 204 101 69 chr17 62236692 62236937 -33035714 - L1_Mur2 LINE L1 -5897 1189 920 3 1059 384 376 0 0 chr17 62237702 62237803 -33034848 - B1_Mur2 SINE Alu -47 102 2 3 1059 24 0 0 0 chr17 62239861 62239885 -33032766 + AT_rich Low_complexity Low_complexity 1 24 0 3 1059 450 0 0 0 chr17 62240620 62240670 -33031981 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1059 34 55 0 0 chr17 62241515 62241570 -33031081 + AT_rich Low_complexity Low_complexity 1 55 0 3 1059 21 0 0 0 chr17 62242072 62242093 -33030558 + AT_rich Low_complexity Low_complexity 1 21 0 3 1059 23 101 0 0 chr17 62242220 62242299 -33030352 + AT_rich Low_complexity Low_complexity 1 79 0 3 1059 2214 160 33 15 chr17 62243044 62243437 -33029214 - Lx3C LINE L1 -53 6923 6524 3 1059 3141 160 6 4 chr17 62243438 62243985 -33028666 + L1_Mur1 LINE L1 2335 2882 -3004 3 1059 4228 130 11 41 chr17 62243970 62244613 -33028038 + L1_Mur1 LINE L1 4046 4666 -1220 3 1059 4509 87 80 3 chr17 62244613 62245280 -33027371 - L1_Mus3 LINE L1 -4 6634 5917 3 1059 4228 130 11 41 chr17 62245280 62245397 -33027254 + L1_Mur1 LINE L1 4667 4783 -1103 3 1059 258 193 186 40 chr17 62245435 62245559 -33027092 + L1MCc LINE L1 25 166 -6257 3 1059 343 297 53 40 chr17 62245658 62245809 -33026842 + L1MCc LINE L1 293 445 -5978 3 1059 432 275 62 55 chr17 62246109 62246338 -33026313 - Lx8 LINE L1 -1546 5927 5662 3 1059 396 367 34 53 chr17 62246370 62246577 -33026074 - B3A SINE B2 -6 210 8 3 1059 203 357 14 0 chr17 62246970 62247040 -33025611 + MIRm SINE MIR 204 274 -2 3 1059 816 205 63 80 chr17 62247128 62247479 -33025172 - RLTRETN_Mm LTR ERVK 0 403 9 3 1059 491 295 0 9 chr17 62248274 62248387 -33024264 - ID_B1 SINE B4 -6 218 107 3 1059 306 354 61 8 chr17 62248387 62248405 -33024246 - B1F1 SINE Alu -6 143 6 3 1059 197 0 0 67 chr17 62248420 62248450 -33024201 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 3 1059 264 261 79 56 chr17 62248868 62248994 -33023657 - Lx8 LINE L1 -375 7098 6970 3 1059 719 234 51 109 chr17 62249273 62249689 -33022962 - RLTR11B LTR ERVK -135 392 11 3 1059 245 89 22 0 chr17 62249724 62249769 -33022882 + (CAAAAA)n Simple_repeat Simple_repeat 4 49 0 3 1059 262 291 147 5 chr17 62249985 62250175 -33022476 - Lx9 LINE L1 -43 7601 7385 3 1059 378 279 83 44 chr17 62250178 62250407 -33022244 + RLTR15 LTR ERVK 92 329 -30 3 1059 420 318 11 6 chr17 62250505 62250682 -33021969 + (TG)n Simple_repeat Simple_repeat 1 178 0 3 1059 345 329 97 77 chr17 62250719 62250874 -33021777 - RSINE1 SINE B4 0 165 8 3 1059 1417 265 57 12 chr17 62252661 62253150 -33019501 + Lx7 LINE L1 5688 6198 -1498 3 1059 535 191 0 22 chr17 62253150 62253289 -33019362 + (CATATA)n Simple_repeat Simple_repeat 2 137 0 3 1059 362 248 18 100 chr17 62253289 62253459 -33019192 - RMER16 LTR ERVK -91 442 287 3 1059 301 213 134 78 chr17 62253463 62253644 -33019007 - RMER16 LTR ERVK -158 375 201 3 1059 6684 145 37 15 chr17 62253664 62255357 -33017294 - Lx LINE L1 0 6654 4930 3 1059 3524 238 59 12 chr17 62255362 62255991 -33016660 + Lx6 LINE L1 6222 6885 -575 3 1059 1909 155 16 0 chr17 62255991 62256295 -33016356 - RLTR27 LTR ERVK 0 309 1 3 1059 3524 244 40 11 chr17 62256295 62256734 -33015917 + Lx6 LINE L1 6886 7340 -356 3 1059 219 125 40 40 chr17 62256773 62256823 -33015828 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 3 1059 7798 104 32 1 chr17 62256857 62258741 -33013910 - L1_Mus3 LINE L1 -5 6633 4690 3 1059 1009 254 33 45 chr17 62258726 62259060 -33013591 + Lx6 LINE L1 7367 7696 0 3 1060 450 0 0 0 chr17 62259523 62259573 -33013078 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1060 213 240 31 20 chr17 62260130 62260228 -33012423 + (TA)n Simple_repeat Simple_repeat 1 99 0 3 1060 447 316 54 54 chr17 62260505 62260726 -33011925 - MLT2B3 LTR ERVL -331 223 3 3 1060 420 327 9 18 chr17 62260730 62260842 -33011809 + B3 SINE B2 2 112 -104 3 1060 269 164 218 0 chr17 62260842 62260897 -33011754 - Lx2A1 LINE L1 -280 6728 6662 3 1060 331 294 39 53 chr17 62260913 62261121 -33011530 - Lx8 LINE L1 -2 7471 7267 3 1060 262 170 0 0 chr17 62261201 62261254 -33011397 - Lx9 LINE L1 -45 7599 7547 3 1060 1875 80 115 3 chr17 62261335 62261623 -33011028 + RLTR46 LTR ERVK 1 320 0 3 1060 706 269 76 0 chr17 62262546 62262847 -33009804 - Lx9 LINE L1 -6 7638 7315 3 1060 347 316 86 35 chr17 62263394 62263591 -33009060 + Lx8 LINE L1 7173 7379 -94 3 1060 579 342 5 36 chr17 62263680 62263874 -33008777 + B3 SINE B2 27 214 -2 3 1060 2462 281 18 27 chr17 62264166 62264906 -33007745 + Lx9 LINE L1 6733 7465 -179 3 1060 279 0 0 0 chr17 62264909 62264940 -33007711 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1060 230 202 115 35 chr17 62264943 62265030 -33007621 + Lx9 LINE L1 7526 7619 -25 3 1060 353 322 97 13 chr17 62265229 62265383 -33007268 - B4A SINE B4 -23 269 103 3 1060 1135 76 0 0 chr17 62266492 62266636 -33006015 - B1_Mus1 SINE Alu 0 148 5 3 1060 181 208 28 0 chr17 62267096 62267168 -33005483 + (TA)n Simple_repeat Simple_repeat 1 74 0 3 1060 207 0 0 0 chr17 62267585 62267608 -33005043 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1060 451 281 102 36 chr17 62268145 62268311 -33004340 - B3 SINE B2 -36 180 4 3 1060 426 20 0 0 chr17 62268396 62268447 -33004204 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1060 207 200 0 0 chr17 62268464 62268509 -33004142 + T-rich Low_complexity Low_complexity 1 45 0 3 1060 2081 120 12 25 chr17 62269694 62270019 -33002632 - Lx2 LINE L1 0 6997 6677 3 1060 300 191 49 62 chr17 62272416 62272662 -32999989 + (TTATA)n Simple_repeat Simple_repeat 1 242 0 3 1060 1132 68 0 0 chr17 62272817 62272963 -32999688 - B1_Mus2 SINE Alu 0 147 2 3 1060 504 48 0 0 chr17 62274324 62274387 -32998264 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 1060 243 0 0 0 chr17 62274511 62274538 -32998113 + (TC)n Simple_repeat Simple_repeat 2 28 0 3 1060 405 0 0 0 chr17 62274538 62274582 -32998069 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 1060 384 22 0 0 chr17 62275796 62275841 -32996810 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 1060 43 81 0 0 chr17 62275967 62276066 -32996585 + AT_rich Low_complexity Low_complexity 1 99 0 3 1060 578 263 55 125 chr17 62276099 62276569 -32996082 + RLTR12B LTR ERVK 1 334 -25 3 1060 24 0 0 0 chr17 62276579 62276603 -32996048 + AT_rich Low_complexity Low_complexity 1 24 0 3 1060 300 374 24 57 chr17 62276603 62276813 -32995838 + B4A SINE B4 86 288 -4 3 1060 24 84 0 12 chr17 62276876 62276933 -32995718 + AT_rich Low_complexity Low_complexity 1 57 0 3 1060 2625 135 37 28 chr17 62276933 62277398 -32995253 - Lx2 LINE L1 -5 6992 6524 3 1060 24 84 0 12 chr17 62277398 62277424 -32995227 + AT_rich Low_complexity Low_complexity 1 26 0 3 1060 22 70 0 0 chr17 62277478 62277521 -32995130 + AT_rich Low_complexity Low_complexity 1 43 0 3 1060 414 0 0 0 chr17 62327689 62327735 -32944916 + (TC)n Simple_repeat Simple_repeat 2 47 0 3 1060 1319 155 71 2 chr17 62327766 62328010 -32944641 - Lx3C LINE L1 -151 6825 6562 3 1060 922 126 182 10 chr17 62328318 62328510 -32944141 - URR1B DNA MER1_type 0 225 1 3 1060 21 71 0 0 chr17 62328797 62328839 -32943812 + AT_rich Low_complexity Low_complexity 1 42 0 3 1060 22 0 0 0 chr17 62329549 62329571 -32943080 + AT_rich Low_complexity Low_complexity 1 22 0 3 1060 240 35 0 0 chr17 62329738 62329767 -32942884 + (TC)n Simple_repeat Simple_repeat 2 30 0 3 1060 3351 86 2 29 chr17 62329770 62330259 -32942392 - L1_Mus4 LINE L1 -10 6626 6151 3 1060 2853 63 49 10 chr17 62330259 62330645 -32942006 + L1_Mus4 LINE L1 5745 6145 -491 3 1060 1643 136 4 0 chr17 62331171 62331435 -32941216 - Lx2 LINE L1 0 6997 6733 3 1060 288 338 36 50 chr17 62332517 62332657 -32939994 - MTEb LTR MaLR -193 186 49 3 1060 660 238 22 75 chr17 62332930 62333198 -32939453 + RMER17C LTR ERVK 1 254 -156 3 1060 960 252 39 39 chr17 62333201 62333535 -32939116 + RMER17C LTR ERVK 77 410 0 3 1060 700 287 58 23 chr17 62333558 62333815 -32938836 - Lx9 LINE L1 -283 7361 7096 3 1060 22 0 0 0 chr17 62334198 62334220 -32938431 + AT_rich Low_complexity Low_complexity 1 22 0 3 1060 351 167 0 0 chr17 62334327 62334393 -32938258 + (TA)n Simple_repeat Simple_repeat 1 66 0 3 1060 976 271 75 52 chr17 62334610 62335263 -32937388 - L1_Rod LINE L1 -894 4953 4286 3 1060 934 294 133 35 chr17 62335318 62336008 -32936643 + Lx9 LINE L1 6879 7636 -8 3 1060 236 273 0 18 chr17 62336666 62336722 -32935929 + ID4_ SINE ID 7 61 -22 3 1060 33 0 0 58 chr17 62336919 62336971 -32935680 + AT_rich Low_complexity Low_complexity 1 49 0 3 1060 24 0 0 0 chr17 62336996 62337020 -32935631 + AT_rich Low_complexity Low_complexity 1 24 0 3 1060 237 33 0 0 chr17 62337520 62337550 -32935101 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 1060 180 77 0 0 chr17 62337550 62337575 -32935076 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 1060 342 0 0 0 chr17 62337722 62337760 -32934891 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 1060 39 22 0 0 chr17 62338698 62338744 -32933907 + AT_rich Low_complexity Low_complexity 1 46 0 4 1060 270 0 0 0 chr17 62339270 62339300 -32933351 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1060 22 0 0 0 chr17 62339737 62339759 -32932892 + AT_rich Low_complexity Low_complexity 1 22 0 4 1060 224 216 0 0 chr17 62339759 62339810 -32932841 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 4 1060 204 350 20 10 chr17 62340719 62340820 -32931831 - MIR SINE MIR -160 102 1 4 1060 335 279 128 94 chr17 62340964 62341423 -32931228 - Lx9 LINE L1 -1242 6402 5928 4 1060 771 237 198 8 chr17 62341426 62341783 -32930868 + Lx9 LINE L1 7212 7636 -8 4 1060 26 64 0 0 chr17 62341783 62341830 -32930821 + AT_rich Low_complexity Low_complexity 1 47 0 4 1060 188 412 43 43 chr17 62343257 62343513 -32929138 - L2 LINE L2 -788 2631 2376 4 1060 728 290 98 49 chr17 62343582 62343868 -32928783 - RMER15 LTR ERVL 0 575 276 4 1060 236 396 45 87 chr17 62344350 62344682 -32927969 + MLT1H LTR MaLR 25 342 -207 4 1060 310 350 59 59 chr17 62347022 62347295 -32925356 - L1MEg LINE L1 -3748 3489 3217 4 1060 411 287 56 60 chr17 62347296 62347511 -32925140 + B3 SINE B2 2 215 -1 4 1060 226 194 30 0 chr17 62347700 62347767 -32924884 + (TA)n Simple_repeat Simple_repeat 2 70 0 4 1060 360 0 0 0 chr17 62347796 62347836 -32924815 + (TAGA)n Simple_repeat Simple_repeat 1 40 0 4 1060 1121 118 6 0 chr17 62347840 62348018 -32924633 + (GGAGA)n Simple_repeat Simple_repeat 2 180 0 4 1060 252 0 0 0 chr17 62348021 62348049 -32924602 + (GAGAA)n Simple_repeat Simple_repeat 1 28 0 4 1060 431 255 136 68 chr17 62348617 62348794 -32923857 - B3 SINE B2 -6 189 1 4 1060 329 338 124 27 chr17 62348846 62349144 -32923507 - L1MEg LINE L1 -4807 2526 2200 4 1060 444 37 0 0 chr17 62349191 62349245 -32923406 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 1060 299 304 73 65 chr17 62349543 62349775 -32922876 - L1MEg LINE L1 -5477 758 525 4 1060 438 343 40 36 chr17 62350527 62350775 -32921876 - B4A SINE B4 0 292 44 4 1060 234 91 0 0 chr17 62351564 62351597 -32921054 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 1060 1202 48 0 0 chr17 62351751 62351898 -32920753 - B1_Mus2 SINE Alu 0 147 1 4 1060 2384 141 2 261 chr17 62351977 62352585 -32920066 - L1_Mur1 LINE L1 -2025 3861 3472 4 1060 4097 79 0 23 chr17 62352585 62353154 -32919497 - L1Md_F2 LINE L1 0 6582 6027 4 1060 2384 141 2 261 chr17 62353154 62353407 -32919244 - L1_Mur1 LINE L1 -2415 3471 3223 4 1060 4044 133 3 17 chr17 62353407 62354047 -32918604 + Lx LINE L1 6024 6654 0 4 1060 22 35 0 0 chr17 62354132 62354161 -32918490 + AT_rich Low_complexity Low_complexity 1 29 0 4 1060 802 270 35 101 chr17 62354390 62354786 -32917865 + Lx8 LINE L1 4972 5341 -506 4 1060 1247 298 35 28 chr17 62355206 62355331 -32917320 + Lx8 LINE L1 5329 5461 -386 4 1060 2454 164 111 74 chr17 62355331 62355924 -32916727 + RLTR18 LTR ERVK 2 616 0 4 1060 1247 306 52 30 chr17 62355924 62356438 -32916213 + Lx8 LINE L1 5462 6012 -1461 4 1060 3226 58 19 5 chr17 62356438 62356853 -32915798 - BGLII LTR ERVK 0 421 1 4 1060 949 312 139 38 chr17 62356853 62357526 -32915125 + Lx8 LINE L1 6013 6904 -740 4 1060 207 0 0 0 chr17 62357547 62357570 -32915081 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1060 1172 48 0 14 chr17 62357570 62357718 -32914933 - B1_Mus2 SINE Alu 0 147 2 4 1060 272 189 0 0 chr17 62357748 62357801 -32914850 + Lx8 LINE L1 6930 6982 -662 4 1060 225 94 0 0 chr17 62357827 62357859 -32914792 + (GA)n Simple_repeat Simple_repeat 1 32 0 4 1060 670 213 140 16 chr17 62357859 62358045 -32914606 + B3 SINE B2 2 210 -6 4 1060 485 250 48 0 chr17 62358060 62358164 -32914487 + B1_Mur1 SINE Alu 7 115 -34 4 1060 1541 203 41 25 chr17 62358189 62358664 -32913987 - RLTR31B_Mm LTR ERVK -76 508 2 4 1060 42 20 0 0 chr17 62358677 62358726 -32913925 + AT_rich Low_complexity Low_complexity 1 49 0 4 1060 285 29 0 0 chr17 62360767 62360801 -32911850 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 4 1060 3008 108 4 55 chr17 62360801 62361311 -32911340 - Lx LINE L1 -10 6644 6161 4 1060 269 315 9 9 chr17 62361395 62361504 -32911147 + PB1D10 SINE Alu 3 111 -6 4 1060 489 341 40 48 chr17 62361743 62361971 -32910680 + B4A SINE B4 2 227 -65 4 1060 213 189 30 30 chr17 62362141 62362272 -32910379 + (CATATA)n Simple_repeat Simple_repeat 4 134 0 4 1060 639 121 0 0 chr17 62362327 62362426 -32910225 + (GA)n Simple_repeat Simple_repeat 2 100 0 4 1060 283 318 0 0 chr17 62362428 62362538 -32910113 + (CA)n Simple_repeat Simple_repeat 1 110 0 4 1060 315 0 0 0 chr17 62362715 62362750 -32909901 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1060 22706 132 140 66 chr17 62362839 62364494 -32908157 + Lx3_Mus LINE L1 119 1824 -4062 4 1060 7951 48 2 0 chr17 62364494 62365494 -32907157 + L1Md_F2 LINE L1 5587 6582 0 4 1060 22706 93 134 91 chr17 62365494 62367330 -32905321 + Lx3_Mus LINE L1 1825 4166 -1720 4 1060 1088 96 0 14 chr17 62367330 62367478 -32905173 + B1_Mus1 SINE Alu 2 147 -1 4 1060 22706 100 92 63 chr17 62367478 62370303 -32902348 + Lx3_Mus LINE L1 4167 7009 0 4 1060 354 45 0 0 chr17 62370459 62370503 -32902148 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 4 1060 310 106 21 0 chr17 62370534 62370581 -32902070 + L1P5 LINE L1 5593 5640 -516 4 1060 352 130 29 0 chr17 62370593 62370662 -32901989 + (CATATA)n Simple_repeat Simple_repeat 1 71 0 4 1060 405 58 0 0 chr17 62370799 62370851 -32901800 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 1060 713 256 46 120 chr17 62371028 62371201 -32901450 + L1MA6 LINE L1 5591 5760 -540 4 1060 519 229 139 0 chr17 62371201 62371323 -32901328 + B1F SINE Alu 3 141 -8 4 1060 713 256 46 120 chr17 62371323 62371426 -32901225 + L1MA6 LINE L1 5761 5836 -464 4 1060 1947 184 34 10 chr17 62371426 62371811 -32900840 - ORR1B1 LTR MaLR 0 394 1 4 1060 6971 188 45 5 chr17 62371811 62372990 -32899661 - ORR1B1-int LTR MaLR 0 1509 287 4 1060 210 37 0 0 chr17 62372990 62373017 -32899634 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1060 6971 188 45 5 chr17 62373017 62373286 -32899365 - ORR1B1-int LTR MaLR -1223 286 3 4 1060 2073 169 46 3 chr17 62373290 62373663 -32898988 - ORR1B1 LTR MaLR -3 391 3 4 1060 713 256 46 120 chr17 62373663 62373813 -32898838 + L1MA6 LINE L1 5837 5987 -313 4 1060 267 31 0 0 chr17 62374052 62374084 -32898567 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 1060 1571 44 54 0 chr17 62375444 62375648 -32897003 - L1Md_F3 LINE L1 -14 6570 6356 4 1060 1447 46 5 34 chr17 62375717 62375948 -32896703 - L1_Mus1 LINE L1 0 6567 6370 4 1060 693 151 0 0 chr17 62376310 62376429 -32896222 + (TA)n Simple_repeat Simple_repeat 1 119 0 4 1060 203 0 37 0 chr17 62377185 62377212 -32895439 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 4 1060 521 298 8 0 chr17 62377213 62377344 -32895307 - B1_Mus1 SINE Alu -7 141 10 4 1060 212 283 32 32 chr17 62377990 62378052 -32894599 + MIRm SINE MIR 100 161 -115 4 1060 213 229 88 26 chr17 62379502 62379612 -32893039 - MIR3 SINE MIR -10 198 81 4 1060 22 0 0 0 chr17 62379781 62379803 -32892848 + AT_rich Low_complexity Low_complexity 1 22 0 4 1060 1316 279 100 19 chr17 62379826 62380297 -32892354 + MMAR1 DNA Mariner 29 537 -749 4 1060 379 149 48 28 chr17 62382184 62382329 -32890322 + (TAGA)n Simple_repeat Simple_repeat 3 150 0 4 1060 183 129 0 0 chr17 62382322 62382353 -32890298 + (CATA)n Simple_repeat Simple_repeat 2 32 0 4 1060 1384 128 12 25 chr17 62382448 62382688 -32889963 + Lx3B LINE L1 6734 6970 -3 4 1060 189 371 58 36 chr17 62383996 62384133 -32888518 + MIRb SINE MIR 3 142 -126 4 1060 510 17 0 0 chr17 62384867 62384926 -32887725 + (TA)n Simple_repeat Simple_repeat 1 59 0 4 1060 837 119 13 7 chr17 62385740 62385892 -32886759 + (GAAA)n Simple_repeat Simple_repeat 1 153 0 4 1060 451 260 125 83 chr17 62387784 62387952 -32884699 - B3A SINE B2 0 198 24 4 1060 322 147 0 29 chr17 62388343 62388413 -32884238 + GA-rich Low_complexity Low_complexity 1 68 0 4 1060 2755 234 109 11 chr17 62388482 62389795 -32882856 + Lx7 LINE L1 846 2287 -3593 4 132 4075 197 83 27 chr17 62389792 62390913 -32881738 + Lx7 LINE L1 4985 6167 -1529 4 1061 1326 234 208 30 chr17 62391375 62391846 -32880805 - RMER2 LTR ERV1 -12 555 1 4 1061 240 35 0 0 chr17 62392101 62392130 -32880521 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 1061 25 0 0 0 chr17 62392687 62392712 -32879939 + AT_rich Low_complexity Low_complexity 1 25 0 4 1061 315 0 0 0 chr17 62394412 62394447 -32878204 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 1061 351 0 0 0 chr17 62394998 62395037 -32877614 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1061 252 143 0 0 chr17 62395309 62395351 -32877300 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1061 1955 129 29 6 chr17 62395963 62396226 -32876425 + ORR1A2 LTR MaLR 1 272 -55 2 1061 1130 65 0 0 chr17 62396226 62396365 -32876286 + B1_Mus1 SINE Alu 1 139 -9 4 1061 351 0 0 0 chr17 62396365 62396404 -32876247 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 1061 1955 129 29 6 chr17 62396404 62396451 -32876200 + ORR1A2 LTR MaLR 273 318 -9 2 1061 241 387 0 9 chr17 62396454 62396561 -32876090 + MLT2B1 LTR ERVL 394 499 -68 4 1061 207 0 0 0 chr17 62397657 62397680 -32874971 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1061 280 330 57 67 chr17 62397680 62398011 -32874640 + L1M2 LINE L1 4042 4369 -1771 4 1061 23 0 0 0 chr17 62398011 62398034 -32874617 + AT_rich Low_complexity Low_complexity 1 23 0 4 1061 919 314 56 12 chr17 62398110 62398703 -32873948 + L1M2 LINE L1 4383 5001 -1142 4 1061 271 186 22 34 chr17 62398801 62398890 -32873761 + Lx6 LINE L1 7347 7434 -26 4 1061 527 276 129 43 chr17 62398926 62399213 -32873438 + L1M2 LINE L1 5137 5453 -847 4 1061 624 267 205 7 chr17 62399213 62399515 -32873136 + ORR1D2 LTR MaLR 5 366 -4 4 1061 527 273 109 67 chr17 62399515 62399786 -32872865 + L1M2 LINE L1 5454 5727 -573 4 1061 1324 107 5 0 chr17 62400272 62400459 -32872192 + B2_Mm2 SINE B2 1 188 -7 4 1061 476 292 76 33 chr17 62400516 62400700 -32871951 - B3A SINE B2 -6 192 1 4 1061 522 273 37 15 chr17 62401815 62401949 -32870702 + RSINE1 SINE B4 5 141 -24 4 1061 330 26 0 0 chr17 62401962 62402001 -32870650 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1061 391 269 73 22 chr17 62402205 62402342 -32870309 - B1F SINE Alu -5 144 1 4 1061 1242 241 59 67 chr17 62402841 62403197 -32869454 - ORR1E LTR MaLR -6 353 1 4 1061 610 299 75 33 chr17 62404278 62404492 -32868159 + MER58A DNA MER1_type 1 223 -1 4 1061 564 271 201 29 chr17 62404618 62405233 -32867418 - L1MA8 LINE L1 -76 6215 5478 4 1061 225 0 0 0 chr17 62405519 62405544 -32867107 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1061 643 330 0 19 chr17 62406563 62406779 -32865872 + B3 SINE B2 3 214 -2 4 1061 23 0 0 0 chr17 62407297 62407320 -32865331 + AT_rich Low_complexity Low_complexity 1 23 0 5 1061 368 48 75 28 chr17 62407877 62407984 -32864667 + A-rich Low_complexity Low_complexity 1 112 0 5 1061 221 286 73 32 chr17 62408088 62408211 -32864440 + MIR SINE MIR 109 236 -26 5 1061 332 330 44 27 chr17 62408484 62408621 -32864030 - B1F2 SINE Alu -8 141 2 5 1061 432 0 0 0 chr17 62408853 62408901 -32863750 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1061 1263 204 52 21 chr17 62409500 62409786 -32862865 - Lx5 LINE L1 -3 7047 6753 5 1061 22 0 0 0 chr17 62409911 62409933 -32862718 + AT_rich Low_complexity Low_complexity 1 22 0 5 1061 757 70 30 15 chr17 62410472 62410603 -32862048 + (TAGA)n Simple_repeat Simple_repeat 3 135 0 5 1061 449 399 61 30 chr17 62410606 62411005 -32861646 - MLT2B3 LTR ERVL -52 502 90 5 1061 2193 102 6 74 chr17 62411005 62411284 -32861367 + ORR1A2 LTR MaLR 1 272 -55 5 1061 1165 62 0 0 chr17 62411284 62411429 -32861222 + B1_Mus1 SINE Alu 2 146 -2 5 1061 2193 102 6 74 chr17 62411429 62411500 -32861151 + ORR1A2 LTR MaLR 273 327 0 5 1061 449 399 61 30 chr17 62411500 62411573 -32861078 - MLT2B3 LTR ERVL -465 89 16 5 1061 412 222 81 0 chr17 62411586 62411685 -32860966 + PB1D9 SINE Alu 6 112 -8 5 1061 180 286 118 39 chr17 62412324 62412477 -32860174 + L3 LINE CR1 3417 3581 -908 5 1061 2938 101 0 12 chr17 62412732 62413144 -32859507 - MTB_Mm LTR MaLR 0 407 1 5 1061 3307 33 8 0 chr17 62413258 62413651 -32859000 - MTA_Mm LTR MaLR 0 396 1 5 1061 315 71 0 0 chr17 62414249 62414291 -32858360 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1061 405 0 0 0 chr17 62415499 62415544 -32857107 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1061 10838 103 15 15 chr17 62415906 62418375 -32854276 + L1Md_F2 LINE L1 273 2724 -3159 5 1061 10796 72 1 0 chr17 62418371 62419791 -32852860 + L1Md_F2 LINE L1 4164 5585 -298 5 1061 7526 60 11 6 chr17 62419792 62420778 -32851873 + L1Md_F2 LINE L1 5587 6577 -5 5 1061 291 278 27 14 chr17 62420974 62421047 -32851604 - B1F1 SINE Alu -69 80 7 5 1061 235 328 0 17 chr17 62420999 62421058 -32851593 - ID_B1 SINE B4 -89 135 78 5 1061 341 291 160 51 chr17 62421966 62422259 -32850392 + MLT1C LTR MaLR 143 467 0 5 1061 708 98 0 0 chr17 62422646 62422748 -32849903 + (CA)n Simple_repeat Simple_repeat 2 103 0 5 1061 261 0 0 0 chr17 62422932 62422961 -32849690 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1061 621 0 0 0 chr17 62423455 62423524 -32849127 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 5 1061 271 120 0 57 chr17 62423552 62423605 -32849046 - ORR1D2 LTR MaLR -2 377 328 5 1061 5449 48 1 25 chr17 62423612 62424320 -32848331 + L1Md_F2 LINE L1 5891 6581 -1 5 1061 712 313 132 4 chr17 62424521 62424794 -32847857 - ORR1D2 LTR MaLR -62 308 1 5 1061 765 146 0 0 chr17 62427465 62427630 -32845021 + (TC)n Simple_repeat Simple_repeat 1 165 0 5 1061 233 316 123 69 chr17 62427701 62427956 -32844695 - B4A SINE B4 -8 284 7 5 1061 21 36 0 0 chr17 62428628 62428656 -32843995 + AT_rich Low_complexity Low_complexity 1 28 0 5 1061 876 0 0 0 chr17 62429251 62429363 -32843288 + L1Md_T LINE L1 6471 6582 0 5 1061 22 56 0 0 chr17 62429534 62429570 -32843081 + AT_rich Low_complexity Low_complexity 1 36 0 5 1061 503 386 60 24 chr17 62429918 62430250 -32842401 - MTD LTR MaLR -68 351 8 5 1061 233 305 42 10 chr17 62430723 62430819 -32841832 - MLT1A LTR MaLR 0 365 267 5 1061 484 266 28 0 chr17 62430963 62431072 -32841579 - B1F SINE Alu -11 138 27 5 1061 262 356 50 0 chr17 62431082 62431183 -32841468 - MLT1A LTR MaLR -251 123 18 5 1061 207 114 29 0 chr17 62434838 62434873 -32837778 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 1061 234 81 0 0 chr17 62434999 62435036 -32837615 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 5 1061 390 316 142 114 chr17 62435068 62435141 -32837510 - MLT2D LTR ERVL -100 314 252 5 1061 253 346 10 0 chr17 62435141 62435245 -32837406 - PB1D10 SINE Alu -8 109 5 5 1061 390 316 142 114 chr17 62435245 62435460 -32837191 - MLT2D LTR ERVL -163 251 18 5 1061 503 288 22 84 chr17 62435477 62435569 -32837082 + MTD LTR MaLR 1 94 -325 5 1061 972 172 293 17 chr17 62435569 62435859 -32836792 + ORR1D1 LTR MaLR 1 370 -4 5 1061 503 266 127 47 chr17 62435859 62436131 -32836520 + MTD LTR MaLR 69 374 -5 5 1061 2765 128 24 0 chr17 62436193 62436616 -32836035 - Lx2A1 LINE L1 -989 6019 5587 5 1061 5052 168 46 10 chr17 62436639 62437575 -32835076 + Lx2A1 LINE L1 6037 7006 -2 5 1061 570 323 62 8 chr17 62438123 62438379 -32834272 - L1M2 LINE L1 -1106 5037 4768 5 1061 576 62 0 0 chr17 62439455 62439536 -32833115 + (TG)n Simple_repeat Simple_repeat 1 81 0 5 1061 1051 303 116 51 chr17 62440006 62440558 -32832093 - Lx8 LINE L1 -478 6995 6408 5 1061 269 273 19 48 chr17 62443126 62443230 -32829421 - PB1D10 SINE Alu -7 110 10 5 1061 21 57 0 0 chr17 62443397 62443432 -32829219 + AT_rich Low_complexity Low_complexity 1 35 0 5 1061 537 92 0 0 chr17 62443768 62443844 -32828807 + (GGGA)n Simple_repeat Simple_repeat 4 79 0 5 1061 916 65 58 0 chr17 62443844 62443998 -32828653 + (GAAA)n Simple_repeat Simple_repeat 4 166 0 5 1061 1343 93 11 0 chr17 62444071 62444253 -32828398 + B2_Mm1t SINE B2 2 185 -8 5 1061 345 262 31 54 chr17 62444370 62444499 -32828152 - MLT2B4 LTR ERVL -428 128 3 5 1061 282 331 82 42 chr17 62445427 62445805 -32826846 - L1MA6 LINE L1 -38 6262 5870 5 1061 215 222 19 0 chr17 62446207 62446261 -32826390 + CT-rich Low_complexity Low_complexity 1 55 0 5 1061 3304 258 81 34 chr17 62446318 62447485 -32825166 - Lx9 LINE L1 -127 7517 6297 5 1061 1122 231 52 145 chr17 62447572 62447612 -32825039 - ORR1C2 LTR MaLR -2 382 348 5 1061 2437 96 98 14 chr17 62447612 62447981 -32824670 + MTB LTR MaLR 1 400 0 5 1061 1122 231 52 145 chr17 62447981 62448360 -32824291 - ORR1C2 LTR MaLR -37 347 2 5 1061 711 257 40 8 chr17 62448469 62448730 -32823921 - Lx9 LINE L1 -1672 5972 5670 5 1061 281 68 23 0 chr17 62448734 62448778 -32823873 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 5 1061 1399 282 22 51 chr17 62448842 62449042 -32823609 + MTD LTR MaLR 1 206 -213 5 1061 1315 44 43 22 chr17 62449042 62449227 -32823424 + L1Md_F3 LINE L1 6395 6583 -1 5 1061 1399 282 22 51 chr17 62449227 62449437 -32823214 + MTD LTR MaLR 207 399 -20 5 1061 243 226 0 19 chr17 62449437 62449491 -32823160 - Lx9 LINE L1 -231 5616 5564 5 1061 320 256 51 16 chr17 62449576 62449721 -32822930 - L1MA6 LINE L1 -824 5479 5327 5 1061 373 335 76 0 chr17 62449982 62450167 -32822484 + RMER15 LTR ERVL 372 570 -5 5 1061 2414 267 6 2 chr17 62450173 62450713 -32821938 - Lx6 LINE L1 -4 7456 6915 5 1061 484 257 78 7 chr17 62450802 62450943 -32821708 - RCHARR1 DNA MER1_type -9 965 815 5 1061 1875 200 43 15 chr17 62450948 62451339 -32821312 - MTB_Mm LTR MaLR -5 402 1 5 1061 1542 305 106 23 chr17 62451339 62452093 -32820558 - RCHARR1 DNA MER1_type -152 822 5 5 1061 884 71 0 34 chr17 62452657 62452803 -32819848 + L1Md_F2 LINE L1 6442 6582 0 5 1061 186 192 0 0 chr17 62452852 62452904 -32819747 + (TTATA)n Simple_repeat Simple_repeat 5 56 0 5 1061 39 50 0 0 chr17 62452914 62452974 -32819677 + AT_rich Low_complexity Low_complexity 1 60 0 5 1061 3145 58 2 8 chr17 62454187 62454585 -32818066 + MTA_Mm LTR MaLR 1 396 0 5 1061 23 0 0 0 chr17 62454615 62454638 -32818013 + AT_rich Low_complexity Low_complexity 1 23 0 5 1061 188 139 61 37 chr17 62455053 62455135 -32817516 + T-rich Low_complexity Low_complexity 1 84 0 5 1061 27 29 0 0 chr17 62455293 62455327 -32817324 + AT_rich Low_complexity Low_complexity 1 34 0 5 1061 189 0 0 0 chr17 62455776 62455797 -32816854 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1061 679 249 201 8 chr17 62457393 62457656 -32814995 - Lx8 LINE L1 -348 7125 6812 5 1061 37 39 0 0 chr17 62457735 62457786 -32814865 + AT_rich Low_complexity Low_complexity 1 51 0 5 1061 238 146 0 0 chr17 62459389 62459437 -32813214 + Lx8 LINE L1 7424 7471 -2 5 1061 33 66 0 32 chr17 62459934 62460028 -32812623 + AT_rich Low_complexity Low_complexity 1 91 0 5 1061 23 68 0 0 chr17 62460668 62460712 -32811939 + AT_rich Low_complexity Low_complexity 1 44 0 5 1061 3010 86 2 10 chr17 62461115 62461527 -32811124 + RLTR9E LTR ERVK 1 409 0 5 1061 343 135 13 63 chr17 62461528 62461607 -32811044 + ETnERV-int LTR ERVK 2 76 -3238 5 1061 345 342 48 66 chr17 62462618 62462784 -32809867 - MLT1J2 LTR MaLR -20 428 266 5 1061 222 150 0 0 chr17 62463283 62463323 -32809328 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1061 377 359 57 0 chr17 62463535 62463641 -32809010 + B4A SINE B4 118 229 -63 5 1061 357 299 56 100 chr17 62463652 62463812 -32808839 + RSINE1 SINE B4 13 165 0 5 1061 249 311 0 0 chr17 62463889 62463963 -32808688 + B4A SINE B4 218 291 -1 5 1061 1136 138 78 0 chr17 62464457 62464674 -32807977 + Lx2 LINE L1 6762 6995 -2 5 1061 536 368 16 0 chr17 62464782 62464967 -32807684 + B3A SINE B2 1 188 -10 5 1061 965 278 131 14 chr17 62465078 62465436 -32807215 - MTD LTR MaLR -4 415 16 5 1061 436 262 48 0 chr17 62465691 62465794 -32806857 + B1_Mm SINE Alu 10 117 -30 5 1061 385 218 0 11 chr17 62465792 62465880 -32806771 + RMER4B LTR ERVK 499 585 0 5 1061 26 0 0 0 chr17 62465908 62465934 -32806717 + AT_rich Low_complexity Low_complexity 1 26 0 5 1061 23 33 0 0 chr17 62465961 62465991 -32806660 + AT_rich Low_complexity Low_complexity 1 30 0 5 1061 282 219 37 19 chr17 62468091 62468198 -32804453 + T-rich Low_complexity Low_complexity 2 110 0 5 1061 252 0 0 0 chr17 62468284 62468312 -32804339 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 5 1061 549 246 74 15 chr17 62468459 62468661 -32803990 - Lx7 LINE L1 -1 7695 7482 5 1061 195 42 0 0 chr17 62468690 62468714 -32803937 + (GGGA)n Simple_repeat Simple_repeat 1 24 0 5 1061 6252 102 13 19 chr17 62468718 62469640 -32803011 + Lx3_Mus LINE L1 6073 6988 -21 5 1061 357 24 0 0 chr17 62469640 62469682 -32802969 + (TAA)n Simple_repeat Simple_repeat 2 43 0 5 1061 304 299 229 33 chr17 62469727 62469910 -32802741 + HAL1-3A_ME LINE L1 1982 2200 -658 5 1061 2590 249 44 5 chr17 62469987 62470825 -32801826 - Lx7 LINE L1 -356 7340 6366 5 1061 3940 203 54 26 chr17 62470848 62471980 -32800671 - Lx7 LINE L1 -1613 6083 4928 5 1061 321 262 0 0 chr17 62471980 62472041 -32800610 - PB1D9 SINE Alu -59 61 1 5 1061 1267 286 57 61 chr17 62472106 62472842 -32799809 + Lx9 LINE L1 6894 7626 -18 5 1061 2672 157 74 20 chr17 62473730 62474217 -32798434 + Lx2 LINE L1 6484 6996 -1 5 1061 1185 241 41 54 chr17 62474764 62475080 -32797571 + Lx5 LINE L1 6739 7050 0 5 1061 257 51 26 0 chr17 62475138 62475177 -32797474 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 1061 229 367 73 78 chr17 62475695 62475940 -32796711 + LTR78 LTR ERV1 304 547 -757 6 1061 664 288 56 0 chr17 62476423 62476621 -32796030 - B3 SINE B2 -1 215 7 6 1061 6388 149 1 6 chr17 62477474 62478516 -32794135 - L1_Mus4 LINE L1 -290 5593 4557 6 1061 6515 121 37 3 chr17 62478515 62479511 -32793140 + L1_Mus4 LINE L1 5607 6636 0 6 1061 203 377 113 6 chr17 62479617 62479785 -32792866 - MER5A DNA MER1_type -2 187 2 6 1061 1206 118 21 0 chr17 62480128 62480314 -32792337 - B2_Mm2 SINE B2 -4 191 2 6 1061 189 159 0 0 chr17 62480434 62480478 -32792173 + A-rich Low_complexity Low_complexity 1 44 0 6 1061 1740 216 35 5 chr17 62480822 62481189 -32791462 - ORR1C1 LTR MaLR 0 378 1 6 1061 567 335 69 22 chr17 62482527 62482802 -32789849 + B4A SINE B4 5 292 0 6 1061 195 129 0 0 chr17 62482994 62483025 -32789626 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1061 29 28 0 0 chr17 62483489 62483525 -32789126 + AT_rich Low_complexity Low_complexity 1 36 0 6 1061 396 0 0 0 chr17 62484328 62484372 -32788279 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1061 324 209 8 25 chr17 62485373 62485491 -32787160 + GA-rich Low_complexity Low_complexity 3 118 0 6 1061 842 301 36 44 chr17 62485502 62485888 -32786763 + Lx9 LINE L1 6881 7263 -381 6 1061 903 268 137 21 chr17 62486791 62487214 -32785437 - Charlie4a DNA MER1_type 0 508 37 6 1061 521 329 0 77 chr17 62488420 62488561 -32784090 + RSINE1 SINE B4 9 139 -26 6 1061 386 20 20 0 chr17 62488561 62488612 -32784039 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 1061 521 329 0 77 chr17 62488612 62488638 -32784013 + RSINE1 SINE B4 140 163 -2 6 1061 916 290 57 51 chr17 62488692 62489044 -32783607 + ORR1E LTR MaLR 6 359 0 6 1061 780 251 38 42 chr17 62489314 62489551 -32783100 - MTE2a LTR MaLR -8 371 136 6 1061 618 139 0 0 chr17 62489565 62489702 -32782949 + (TC)n Simple_repeat Simple_repeat 2 138 0 6 1061 378 0 0 0 chr17 62489702 62489744 -32782907 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 1061 180 0 0 0 chr17 62489744 62489763 -32782888 + (GA)n Simple_repeat Simple_repeat 2 21 0 6 1061 324 0 0 0 chr17 62490287 62490323 -32782328 + (GA)n Simple_repeat Simple_repeat 2 37 0 6 1061 848 10 10 0 chr17 62490323 62490424 -32782227 + (GAA)n Simple_repeat Simple_repeat 3 104 0 6 1061 189 0 0 0 chr17 62490427 62490448 -32782203 + (CAGAGA)n Simple_repeat Simple_repeat 2 22 0 6 1061 23 33 0 0 chr17 62491082 62491112 -32781539 + AT_rich Low_complexity Low_complexity 1 30 0 6 1061 214 224 0 20 chr17 62491184 62491234 -32781417 + (TATATG)n Simple_repeat Simple_repeat 6 54 0 6 1061 237 283 0 0 chr17 62491325 62491378 -32781273 + ID4_ SINE ID 3 55 -28 6 1061 3524 108 92 0 chr17 62491399 62491934 -32780717 - MT2B2 LTR ERVL 0 584 1 6 1061 654 149 0 0 chr17 62492081 62492215 -32780436 + (GA)n Simple_repeat Simple_repeat 1 134 0 6 1061 507 229 0 0 chr17 62492218 62492602 -32780049 + GA-rich Low_complexity Low_complexity 1 384 0 6 1061 382 218 0 22 chr17 62492623 62492806 -32779845 + GA-rich Low_complexity Low_complexity 1 179 0 6 1061 209 181 0 40 chr17 62492827 62492902 -32779749 + GA-rich Low_complexity Low_complexity 1 72 0 6 1061 371 301 165 9 chr17 62494439 62494675 -32777976 - MLT2B1 LTR ERVL -3 564 273 6 1061 471 247 22 49 chr17 62495234 62495417 -32777234 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 6 1061 540 45 0 0 chr17 62497027 62497094 -32775557 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 6 1061 387 0 0 0 chr17 62498289 62498332 -32774319 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 6 1061 1078 96 0 7 chr17 62498332 62498471 -32774180 - B1_Mus2 SINE Alu -7 140 3 6 1061 348 345 22 41 chr17 62498855 62499124 -32773527 + L1M1 LINE L1 5341 5604 -699 6 1061 419 123 0 14 chr17 62499121 62499185 -32773466 + L1_Mur2 LINE L1 4791 4854 -1023 6 1061 306 0 0 0 chr17 62499185 62499219 -32773432 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 6 1061 696 84 0 78 chr17 62499228 62499382 -32773269 + GA-rich Low_complexity Low_complexity 3 144 0 6 1061 1825 146 16 6 chr17 62499382 62499693 -32772958 + L1_Mur2 LINE L1 4851 5164 -713 6 1061 1727 154 26 16 chr17 62499695 62499998 -32772653 + Lx2B LINE L1 6675 6980 -20 6 1061 7258 62 29 16 chr17 62500086 62500336 -32772315 - L1Md_F2 LINE L1 -4 6578 6320 1 1061 3359 40 0 0 chr17 62500336 62500732 -32771919 + MTA_Mm LTR MaLR 1 396 0 2 1061 7271 65 16 13 chr17 62500732 62502108 -32770543 - L1Md_F2 LINE L1 -263 6319 4939 1 1061 1970 57 15 0 chr17 62502315 62502577 -32770074 + L1Md_F2 LINE L1 6317 6582 0 3 1061 1141 303 50 24 chr17 62502981 62503438 -32769213 + Lx8 LINE L1 7001 7469 -4 4 1061 207 0 0 0 chr17 62503608 62503631 -32769020 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1061 31 26 0 0 chr17 62504193 62504231 -32768420 + AT_rich Low_complexity Low_complexity 1 38 0 6 1061 450 0 0 0 chr17 62504694 62504744 -32767907 + (TC)n Simple_repeat Simple_repeat 2 51 0 7 1061 413 154 14 0 chr17 62505130 62505208 -32767443 - MLT1A1 LTR MaLR -38 370 259 8 1061 297 0 0 0 chr17 62505519 62505552 -32767099 + (A)n Simple_repeat Simple_repeat 1 33 0 9 1061 2854 223 62 22 chr17 62505715 62506436 -32766215 + Lx7 LINE L1 5131 5880 0 1 1061 3781 239 30 8 chr17 62506453 62507335 -32765316 + Lx7 LINE L1 6032 6932 -764 1 1061 453 272 124 7 chr17 62508254 62508391 -32764260 + LFSINE_Vert SINE SINE 4 156 -303 1 1061 279 265 0 0 chr17 62508394 62508462 -32764189 + A-rich Low_complexity Low_complexity 1 68 0 1 1061 199 250 109 43 chr17 62508500 62508592 -32764059 + MIR SINE MIR 67 164 -98 1 1061 642 85 0 0 chr17 62510500 62510594 -32762057 + (CA)n Simple_repeat Simple_repeat 1 94 0 1 1061 203 114 0 54 chr17 62511873 62511899 -32760752 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1061 549 0 0 0 chr17 62511899 62511960 -32760691 + (GA)n Simple_repeat Simple_repeat 2 62 0 1 1061 203 114 0 54 chr17 62511960 62511970 -32760681 + (CA)n Simple_repeat Simple_repeat 1 10 0 1 1061 25 0 0 0 chr17 62512073 62512098 -32760553 + AT_rich Low_complexity Low_complexity 1 25 0 1 1061 1185 289 77 98 chr17 62512098 62512770 -32759881 - Lx8 LINE L1 -5 7468 6811 1 1061 253 298 73 24 chr17 62513462 62513586 -32759065 - MIR SINE MIR -105 157 28 2 1061 3838 49 4 0 chr17 62514542 62515015 -32757636 + L1_Mus1 LINE L1 6093 6567 0 2 1061 3964 61 0 38 chr17 62515223 62515754 -32756897 - L1_Mus2 LINE L1 0 6566 6056 2 1061 430 241 65 36 chr17 62515870 62516008 -32756643 - RSINE1 SINE B4 -19 146 5 2 1061 867 30 44 0 chr17 62519097 62519232 -32753419 + (TC)n Simple_repeat Simple_repeat 2 142 0 2 1061 21 0 0 0 chr17 62520413 62520434 -32752217 + AT_rich Low_complexity Low_complexity 1 21 0 2 1061 21 0 0 0 chr17 62520714 62520735 -32751916 + AT_rich Low_complexity Low_complexity 1 21 0 2 1061 395 350 0 65 chr17 62520864 62521032 -32751619 + ID_B1 SINE B4 61 217 -7 2 1062 23 33 0 0 chr17 62522511 62522541 -32750110 + AT_rich Low_complexity Low_complexity 1 30 0 2 1062 453 66 0 0 chr17 62522996 62523057 -32749594 + (TTA)n Simple_repeat Simple_repeat 3 63 0 2 1062 414 0 0 0 chr17 62524265 62524311 -32748340 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 1062 222 62 0 0 chr17 62524432 62524464 -32748187 + (T)n Simple_repeat Simple_repeat 1 32 0 3 1062 40 37 0 0 chr17 62526395 62526449 -32746202 + AT_rich Low_complexity Low_complexity 1 54 0 3 1062 207 0 0 0 chr17 62527876 62527899 -32744752 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1062 1390 252 114 45 chr17 62528209 62528394 -32744257 - MT2A LTR ERVL -8 525 329 3 1062 1993 124 0 53 chr17 62528394 62528752 -32743899 + Lx3B LINE L1 6632 6970 -3 3 1062 462 18 0 0 chr17 62528757 62528812 -32743839 + (GGA)n Simple_repeat Simple_repeat 3 57 0 3 1062 1390 252 114 45 chr17 62528812 62529110 -32743541 - MT2A LTR ERVL -209 324 2 3 1062 24 32 0 0 chr17 62530103 62530134 -32742517 + AT_rich Low_complexity Low_complexity 1 31 0 3 1062 24 77 0 0 chr17 62531458 62531510 -32741141 + AT_rich Low_complexity Low_complexity 1 52 0 3 1062 243 0 0 0 chr17 62532514 62532541 -32740110 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1062 564 262 25 35 chr17 62532662 62532860 -32739791 - Tigger14a DNA MER2_type -3 321 126 4 1062 570 257 0 26 chr17 62532981 62533133 -32739518 + B1_Mur2 SINE Alu 2 149 0 4 1062 1928 124 3 0 chr17 62533218 62533517 -32739134 - Lx2A1 LINE L1 0 7008 6709 4 1062 501 58 0 0 chr17 62533577 62533646 -32739005 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 4 1062 216 0 0 0 chr17 62533799 62533823 -32738828 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1062 632 319 13 13 chr17 62533823 62534061 -32738590 - Lx7 LINE L1 -391 7305 7068 4 1062 1752 224 114 28 chr17 62534063 62534564 -32738087 - L1_Mur3 LINE L1 -1973 3907 3364 4 1062 1123 75 0 0 chr17 62534666 62534812 -32737839 + B1_Mm SINE Alu 2 147 0 4 1062 711 215 389 4 chr17 62534822 62535092 -32737559 + ORR1D1 LTR MaLR 1 374 0 4 1062 367 223 74 0 chr17 62535806 62535927 -32736724 - Lx9 LINE L1 -2 7642 7513 4 1062 287 297 83 42 chr17 62537824 62537968 -32734683 + MIR SINE MIR 67 216 -46 5 1062 1058 95 7 7 chr17 62538065 62538213 -32734438 + B1_Mus1 SINE Alu 1 148 0 5 1062 21 0 0 0 chr17 62538288 62538309 -32734342 + AT_rich Low_complexity Low_complexity 1 21 0 5 1062 198 0 0 0 chr17 62538309 62538331 -32734320 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 5 1062 5594 113 1 34 chr17 62538331 62539218 -32733433 - Lx3A LINE L1 -15 6966 6109 5 1062 591 200 7 29 chr17 62539971 62540110 -32732541 - Lx7 LINE L1 0 7696 7561 5 1062 970 112 7 0 chr17 62540175 62540318 -32732333 - Lx3C LINE L1 -810 5076 4933 5 1062 7056 169 28 8 chr17 62540314 62542151 -32730500 + Lx3C LINE L1 5094 6974 -2 5 1062 216 0 0 0 chr17 62543591 62543615 -32729036 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1062 315 71 0 0 chr17 62543974 62544016 -32728635 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 1062 446 285 132 12 chr17 62544172 62544339 -32728312 + B3A SINE B2 6 192 -6 5 1062 1695 82 0 8 chr17 62544732 62544966 -32727685 - L1Md_F2 LINE L1 -13 6569 6338 6 1062 3824 66 0 0 chr17 62544979 62545466 -32727185 + L1_Mm LINE L1 4679 5165 -718 6 1062 183 264 20 121 chr17 62547087 62547186 -32725465 - MIRm SINE MIR -93 183 95 6 1062 7698 33 1 5 chr17 62547298 62548222 -32724429 + L1Md_F3 LINE L1 5665 6584 0 6 1062 216 122 0 0 chr17 62548527 62548568 -32724083 + (T)n Simple_repeat Simple_repeat 1 41 0 6 1062 243 276 13 0 chr17 62548655 62548731 -32723920 - PB1D10 SINE Alu -36 81 5 6 1062 220 357 149 7 chr17 62549235 62549376 -32723275 + MER5A DNA MER1_type 1 161 -28 6 1062 271 318 56 9 chr17 62549487 62549595 -32723056 - L2b LINE L2 -4 3371 3259 6 1062 717 270 31 8 chr17 62551286 62551476 -32721175 + MTD LTR MaLR 226 405 -14 6 1062 1031 82 0 52 chr17 62551740 62551894 -32720757 - B1_Mus2 SINE Alu -1 146 1 6 1062 21 0 0 0 chr17 62551952 62551973 -32720678 + AT_rich Low_complexity Low_complexity 1 21 0 7 1062 242 343 30 0 chr17 62552134 62552201 -32720450 + AluF_3 SINE Alu 137 205 -106 7 1062 288 291 13 0 chr17 62552271 62552350 -32720301 + ID4 SINE ID 2 81 -2 7 1062 333 0 0 0 chr17 62552354 62552391 -32720260 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 1062 189 375 65 19 chr17 62552513 62552668 -32719983 + L2b LINE L2 2733 2894 -525 7 1062 2604 227 76 31 chr17 62552670 62553444 -32719207 - RMER1B Other Other -5 1061 55 7 1062 1264 194 159 12 chr17 62553767 62554101 -32718550 + ORR1D1 LTR MaLR 1 383 -1 7 1062 2773 249 53 21 chr17 62554103 62554871 -32717780 + ORR1D1-int LTR MaLR 2 794 -576 7 1062 8815 11 0 0 chr17 62554871 62556028 -32716623 - L1Md_A LINE L1 0 6582 5426 7 1062 2047 253 84 25 chr17 62556028 62556587 -32716064 + ORR1D1-int LTR MaLR 779 1370 0 7 1062 1422 206 58 97 chr17 62556587 62556753 -32715898 + ORR1D1 LTR MaLR 1 171 -203 7 1062 1100 29 53 6 chr17 62556753 62556924 -32715727 + (TCTCCC)n Simple_repeat Simple_repeat 2 180 0 7 1062 1422 206 58 97 chr17 62556924 62557138 -32715513 + ORR1D1 LTR MaLR 172 366 -8 7 1062 1804 257 60 40 chr17 62557224 62557856 -32714795 - L1MA6 LINE L1 0 6300 5656 7 1062 268 253 60 0 chr17 62558079 62558162 -32714489 - MER34 LTR ERV1 -68 474 387 8 1062 266 361 32 32 chr17 62558595 62558718 -32713933 + L2b LINE L2 3238 3360 -15 7 1062 378 151 0 0 chr17 62559781 62559854 -32712797 + (CA)n Simple_repeat Simple_repeat 2 74 0 8 1062 265 232 0 0 chr17 62560475 62560531 -32712120 + (CA)n Simple_repeat Simple_repeat 2 57 0 8 1062 204 290 118 91 chr17 62561221 62561407 -32711244 - L2c LINE L2 -87 3300 3110 8 1062 698 216 188 152 chr17 62561938 62562070 -32710581 - ORR1D1 LTR MaLR 0 374 182 8 1062 1063 43 14 0 chr17 62562070 62562211 -32710440 + (GA)n Simple_repeat Simple_repeat 2 144 0 8 1062 698 216 188 152 chr17 62562211 62562439 -32710212 - ORR1D1 LTR MaLR -193 181 1 8 1062 541 262 115 11 chr17 62562848 62563022 -32709629 - MTE2a LTR MaLR 0 379 188 8 1062 1804 147 19 3 chr17 62563078 62563385 -32709266 - Lx LINE L1 -7 6647 6336 8 1062 476 235 0 19 chr17 62563386 62563490 -32709161 + B1_Mur1 SINE Alu 48 149 0 8 1062 406 308 58 17 chr17 62563509 62563681 -32708970 - MTE2a LTR MaLR -195 184 6 8 1062 306 206 0 0 chr17 62564234 62564302 -32708349 + GA-rich Low_complexity Low_complexity 2 69 0 8 1062 441 127 0 0 chr17 62564344 62564423 -32708228 + (TA)n Simple_repeat Simple_repeat 1 79 0 9 1062 577 357 14 7 chr17 62564560 62564848 -32707803 + B4A SINE B4 1 290 -2 9 1062 39 22 0 0 chr17 62565401 62565447 -32707204 + AT_rich Low_complexity Low_complexity 1 46 0 9 1062 327 203 42 32 chr17 62565949 62566055 -32706596 + L1MB7 LINE L1 5829 5935 -249 9 1062 23 0 0 0 chr17 62566118 62566141 -32706510 + AT_rich Low_complexity Low_complexity 1 23 0 9 1062 271 292 42 0 chr17 62566279 62566351 -32706300 + PB1D7 SINE Alu 38 112 -8 9 1062 2663 180 11 15 chr17 62566797 62567326 -32705325 - RLTR11A2 LTR ERVK 0 527 1 9 1062 429 307 58 29 chr17 62567399 62567570 -32705081 - RMER15 LTR ERVL -46 529 354 9 1062 300 303 67 22 chr17 62567716 62567851 -32704800 - Lx8 LINE L1 -299 7174 7034 9 1062 360 0 0 0 chr17 62568669 62568709 -32703942 + (TG)n Simple_repeat Simple_repeat 1 40 0 9 1062 1880 208 147 25 chr17 62568799 62569431 -32703220 - Lx7 LINE L1 0 7696 6988 1 1062 1530 238 83 8 chr17 62569941 62570327 -32702324 - MTC LTR MaLR 0 421 7 1 1062 456 19 0 0 chr17 62570474 62570527 -32702124 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 1062 213 277 0 0 chr17 62570704 62570751 -32701900 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1062 200 206 0 45 chr17 62571377 62571443 -32701208 + (TATATG)n Simple_repeat Simple_repeat 3 65 0 1 1062 29 47 0 0 chr17 62571503 62571546 -32701105 + AT_rich Low_complexity Low_complexity 1 43 0 1 1062 212 179 0 0 chr17 62571643 62571682 -32700969 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 1062 362 57 0 19 chr17 62572315 62572369 -32700282 + (TATG)n Simple_repeat Simple_repeat 2 54 0 1 1062 321 47 0 0 chr17 62573562 62573605 -32699046 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1062 7763 68 4 6 chr17 62573776 62575059 -32697592 + L1_Mus1 LINE L1 5282 6561 -6 1 1062 26 30 0 0 chr17 62575482 62575515 -32697136 + AT_rich Low_complexity Low_complexity 1 33 0 1 1062 1031 97 7 0 chr17 62575604 62575749 -32696902 + B1_Mm SINE Alu 2 147 0 1 1062 229 161 35 18 chr17 62575766 62575823 -32696828 + L1MD LINE L1 2723 2780 -3366 1 1062 263 324 7 75 chr17 62575835 62575956 -32696695 + B4A SINE B4 7 117 -175 1 1062 747 32 0 0 chr17 62575956 62576050 -32696601 + (CA)n Simple_repeat Simple_repeat 1 94 0 1 1062 263 324 7 75 chr17 62576050 62576075 -32696576 + B4A SINE B4 118 142 -150 1 1062 690 143 0 0 chr17 62576075 62576194 -32696457 + (GGGA)n Simple_repeat Simple_repeat 2 120 0 1 1062 1760 134 7 17 chr17 62576489 62576785 -32695866 + Lx LINE L1 6361 6653 -1 1 1062 211 102 102 0 chr17 62577151 62577200 -32695451 + T-rich Low_complexity Low_complexity 5 58 0 1 1062 1151 74 0 0 chr17 62577204 62577352 -32695299 - B1_Mus1 SINE Alu 0 148 1 1 1062 358 264 103 73 chr17 62577388 62577592 -32695059 + L1MA4 LINE L1 3251 3460 -2686 1 1062 263 273 23 63 chr17 62577616 62577717 -32694934 - ID4 SINE ID -49 103 3 1 1062 21 36 0 0 chr17 62577882 62577910 -32694741 + AT_rich Low_complexity Low_complexity 1 28 0 1 1062 294 315 25 83 chr17 62578162 62578283 -32694368 + B1F1 SINE Alu 1 114 -35 1 1062 219 182 12 72 chr17 62578365 62578448 -32694203 + (TTTG)n Simple_repeat Simple_repeat 3 80 0 1 1062 376 300 84 66 chr17 62578615 62578864 -32693787 + L1MA4 LINE L1 4088 4335 -1811 1 1062 2339 134 56 3 chr17 62578864 62579238 -32693413 + ORR1B1 LTR MaLR 1 394 0 1 1062 376 300 84 66 chr17 62579238 62579323 -32693328 + L1MA4 LINE L1 4336 4428 -1718 1 1062 407 271 13 38 chr17 62579354 62579556 -32693095 + L1MA4 LINE L1 5470 5669 -214 1 1062 451 232 26 26 chr17 62579572 62579727 -32692924 + L1MA4 LINE L1 5782 5936 -364 1 1062 580 296 0 0 chr17 62579821 62579963 -32692688 + B1_Mur1 SINE Alu 3 144 -5 1 1062 207 0 0 0 chr17 62580114 62580137 -32692514 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1062 1075 67 0 0 chr17 62580138 62580273 -32692378 - B1_Mus1 SINE Alu -13 135 1 1 1062 2638 243 46 9 chr17 62580345 62581019 -32691632 - Lx9 LINE L1 -252 7392 6694 1 1062 335 327 74 40 chr17 62581921 62582205 -32690446 + L1M5 LINE L1 5271 5561 -603 1 1062 2321 164 10 15 chr17 62582205 62582613 -32690038 + MTB_Mm LTR MaLR 1 406 -1 1 1062 335 327 74 40 chr17 62582613 62582774 -32689877 + L1M5 LINE L1 5562 5731 -433 1 1062 1072 283 39 73 chr17 62582923 62583304 -32689347 + MTEb LTR MaLR 5 372 -7 1 1062 22 56 0 0 chr17 62585312 62585348 -32687303 + AT_rich Low_complexity Low_complexity 1 36 0 1 1062 280 273 0 0 chr17 62585435 62585490 -32687161 + RSINE1 SINE B4 81 135 -30 1 1062 737 236 0 45 chr17 62585834 62585989 -32686662 + B1_Mus1 SINE Alu 1 148 0 1 1062 327 289 529 0 chr17 62587009 62587146 -32685505 + B3 SINE B2 1 210 -6 1 1062 820 191 103 25 chr17 62587700 62587904 -32684747 - MTC LTR MaLR 0 421 202 1 1062 3891 88 52 2 chr17 62587904 62588459 -32684192 - L1_Mus4 LINE L1 -4 6632 6050 1 1062 420 20 0 0 chr17 62588461 62588510 -32684141 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 1062 535 271 103 52 chr17 62588510 62588574 -32684077 - MTC LTR MaLR -209 187 111 1 1062 2450 38 0 0 chr17 62588574 62588863 -32683788 - L1Md_F2 LINE L1 -92 6490 6202 1 1062 849 297 36 36 chr17 62588891 62589206 -32683445 - MTC LTR MaLR -111 308 1 1 1062 434 286 66 42 chr17 62589394 62589635 -32683016 + L1M5 LINE L1 5529 5775 -349 1 1062 476 278 30 45 chr17 62589829 62590029 -32682622 + B3 SINE B2 5 201 -15 1 1062 897 10 0 0 chr17 62591289 62591391 -32681260 + (GAA)n Simple_repeat Simple_repeat 1 102 0 1 1062 235 216 19 19 chr17 62591393 62591445 -32681206 + RSINE1 SINE B4 101 152 -13 1 1062 522 31 0 0 chr17 62591446 62591510 -32681141 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 1062 22 0 0 0 chr17 62592003 62592025 -32680626 + AT_rich Low_complexity Low_complexity 1 22 0 1 1062 286 262 129 90 chr17 62592654 62592809 -32679842 + LTR40a LTR ERVL 53 213 -306 1 1062 247 248 107 27 chr17 62593325 62593474 -32679177 - Lx7 LINE L1 0 7696 7536 1 1062 761 97 18 9 chr17 62593475 62593589 -32679062 - L1_Mus3 LINE L1 -316 6322 6208 1 1062 1863 87 39 7 chr17 62593590 62593869 -32678782 + L1_Mus3 LINE L1 6351 6638 0 1 1062 21 57 0 0 chr17 62594143 62594178 -32678473 + AT_rich Low_complexity Low_complexity 1 35 0 1 1062 269 192 87 48 chr17 62594471 62594575 -32678076 + L1ME4a LINE L1 5994 6101 -23 1 1062 230 259 17 0 chr17 62595449 62595507 -32677144 + (TAAAG)n Simple_repeat Simple_repeat 2 60 0 1 1062 773 140 21 0 chr17 62595748 62595891 -32676760 + T-rich Low_complexity Low_complexity 1 146 0 1 1062 207 0 0 0 chr17 62598023 62598046 -32674605 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 1 1062 180 0 0 0 chr17 62599112 62599132 -32673519 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1 1062 216 0 0 0 chr17 62600308 62600332 -32672319 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1062 1151 164 51 9 chr17 62600366 62600582 -32672069 - URR1B DNA MER1_type 0 225 1 1 1062 785 259 36 5 chr17 62601489 62601683 -32670968 - B3 SINE B2 -1 215 16 1 1062 180 97 0 0 chr17 62602051 62602082 -32670569 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1062 225 0 0 0 chr17 62602463 62602488 -32670163 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 1062 261 0 0 0 chr17 62602695 62602724 -32669927 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1062 1261 281 59 30 chr17 62603980 62604384 -32668267 - MTD LTR MaLR -3 416 1 1 1062 617 217 86 61 chr17 62604392 62604587 -32668064 - MTD-int LTR MaLR -5 1253 1051 1 1062 1005 75 20 20 chr17 62604587 62604736 -32667915 - L1_Mus1 LINE L1 0 6567 6419 1 1062 617 217 86 61 chr17 62604736 62604820 -32667831 - MTD-int LTR MaLR -208 1050 968 1 1062 452 287 51 39 chr17 62604835 62605013 -32667638 + Lx9 LINE L1 7244 7423 -221 1 1062 375 23 0 0 chr17 62605047 62605091 -32667560 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1062 686 142 34 41 chr17 62605933 62606080 -32666571 + RMER17B LTR ERVK 318 463 -495 1 1062 308 296 112 0 chr17 62606475 62606573 -32666078 - B1F2 SINE Alu -9 140 32 1 1062 279 79 0 0 chr17 62607315 62607353 -32665298 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 1 1062 22 0 0 0 chr17 62608269 62608291 -32664360 + AT_rich Low_complexity Low_complexity 1 22 0 1 1062 542 309 6 6 chr17 62608653 62608832 -32663819 - Lx7 LINE L1 -392 7304 7126 1 1062 4320 60 0 0 chr17 62609489 62610186 -32662465 - L1Md_F2 LINE L1 -459 6123 5427 1 1062 3804 30 0 0 chr17 62610186 62610627 -32662024 + L1Md_F2 LINE L1 6127 6567 -15 1 1062 183 80 0 0 chr17 62610636 62610661 -32661990 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1062 280 169 0 40 chr17 62610872 62610930 -32661721 + GA-rich Low_complexity Low_complexity 2 58 0 1 1062 669 25 0 0 chr17 62610930 62611009 -32661642 + (GGAA)n Simple_repeat Simple_repeat 4 82 0 1 1062 280 169 0 40 chr17 62611009 62611024 -32661627 + polypurine Low_complexity Low_complexity 59 72 0 1 1062 764 290 125 31 chr17 62611112 62611439 -32661212 + MTE2b LTR MaLR 22 379 0 1 1062 630 100 0 0 chr17 62611853 62611953 -32660698 + (GA)n Simple_repeat Simple_repeat 2 101 0 1 1062 404 322 37 17 chr17 62611968 62612262 -32660389 - L1MA6 LINE L1 -160 6140 5841 1 1062 3553 190 43 79 chr17 62612801 62613740 -32658911 + Lx2B LINE L1 6003 6907 -93 1 1062 351 44 0 0 chr17 62613764 62613809 -32658842 + (TAA)n Simple_repeat Simple_repeat 2 46 0 1 1062 219 116 44 44 chr17 62614451 62614496 -32658155 - MIRc SINE MIR -36 232 188 1 1062 2379 116 6 3 chr17 62614626 62614988 -32657663 - L1_Mus4 LINE L1 -9 6627 6265 1 1062 225 237 0 0 chr17 62615128 62615187 -32657464 + A-rich Low_complexity Low_complexity 1 59 0 1 1062 357 145 0 0 chr17 62615329 62615391 -32657260 + (TTG)n Simple_repeat Simple_repeat 2 63 0 1 1062 214 276 39 13 chr17 62615925 62616002 -32656649 + (TATATG)n Simple_repeat Simple_repeat 6 84 0 1 1062 788 144 0 27 chr17 62616807 62616957 -32655694 + CT-rich Low_complexity Low_complexity 2 147 0 1 1062 28 0 0 0 chr17 62619311 62619339 -32653312 + AT_rich Low_complexity Low_complexity 1 28 0 1 1062 1420 270 155 31 chr17 62619339 62619496 -32653155 - Lx8 LINE L1 -5 7468 7277 1 1062 351 0 0 0 chr17 62619496 62619535 -32653116 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 1062 1420 270 155 31 chr17 62619535 62620119 -32652532 - Lx8 LINE L1 -197 7276 6635 1 1062 1085 259 15 33 chr17 62620170 62620501 -32652150 + Lx8 LINE L1 6205 6529 -944 1 1062 185 132 26 0 chr17 62622752 62622790 -32649861 + GA-rich Low_complexity Low_complexity 3 41 0 1 1062 180 152 0 0 chr17 62623690 62623723 -32648928 + GA-rich Low_complexity Low_complexity 1 33 0 1 1062 192 102 0 58 chr17 62624173 62624225 -32648426 + (TTTG)n Simple_repeat Simple_repeat 1 49 0 1 1062 216 97 0 0 chr17 62624241 62624272 -32648379 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 1 1062 580 248 16 0 chr17 62624277 62624402 -32648249 - B1_Mur2 SINE Alu 0 149 23 1 1062 374 268 96 27 chr17 62624847 62624993 -32647658 - MIR SINE MIR -5 257 102 1 1062 377 311 6 12 chr17 62626025 62626191 -32646460 + GA-rich Low_complexity Low_complexity 2 166 0 1 1062 589 358 60 16 chr17 62626502 62626752 -32645899 - B4A SINE B4 -1 291 31 1 1062 391 331 0 6 chr17 62627102 62627272 -32645379 + CT-rich Low_complexity Low_complexity 2 170 0 1 1062 233 242 30 15 chr17 62627391 62627458 -32645193 + MTEb LTR MaLR 302 369 -10 2 1062 392 275 60 60 chr17 62627482 62627683 -32644968 - MIR SINE MIR -1 261 61 2 1062 2241 176 22 12 chr17 62628553 62629095 -32643556 + Lx4B LINE L1 6351 6974 -84 2 1062 185 65 32 0 chr17 62629106 62629137 -32643514 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 2 1062 216 0 0 0 chr17 62630001 62630025 -32642626 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 1062 22 70 0 0 chr17 62630943 62630986 -32641665 + AT_rich Low_complexity Low_complexity 1 43 0 2 1062 297 308 111 104 chr17 62632683 62633095 -32639556 + MLT1E2 LTR MaLR 66 516 -108 2 1062 621 204 0 0 chr17 62633603 62633735 -32638916 + (TG)n Simple_repeat Simple_repeat 1 132 0 2 1062 359 132 0 0 chr17 62633741 62633794 -32638857 - HAL1-3A_ME LINE L1 -840 2018 1966 2 1062 864 202 140 34 chr17 62634570 62634862 -32637789 - Lx9 LINE L1 -4 7640 7318 2 1062 267 302 76 38 chr17 62635546 62635680 -32636971 + MIR SINE MIR 18 162 -106 2 1062 839 160 0 6 chr17 62636412 62636569 -32636082 + GA-rich Low_complexity Low_complexity 1 156 0 2 1062 1502 276 9 3 chr17 62639903 62640245 -32632406 - MTD LTR MaLR -75 344 1 2 1062 1083 94 0 0 chr17 62640550 62640730 -32631921 + (TC)n Simple_repeat Simple_repeat 1 180 0 2 1062 32 0 0 0 chr17 62641393 62641425 -32631226 + AT_rich Low_complexity Low_complexity 1 32 0 2 1062 210 105 0 0 chr17 62643154 62643192 -32629459 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 2 1062 1143 64 0 0 chr17 62643193 62643333 -32629318 - B1_Mus2 SINE Alu -7 140 1 2 1062 583 230 50 74 chr17 62644608 62644810 -32627841 - B3A SINE B2 0 198 2 2 1062 4468 189 111 57 chr17 62645129 62646373 -32626278 - Lx9 LINE L1 -8 7636 6327 2 1062 342 0 0 0 chr17 62647690 62647728 -32624923 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1062 321 26 0 0 chr17 62647728 62647765 -32624886 + (GA)n Simple_repeat Simple_repeat 1 38 0 2 1062 201 108 0 0 chr17 62648758 62648795 -32623856 + (A)n Simple_repeat Simple_repeat 1 37 0 2 1062 283 282 66 19 chr17 62649721 62649934 -32622717 + RMER17C LTR ERVK 53 275 -135 2 1062 302 218 282 0 chr17 62650804 62650928 -32621723 + Lx9 LINE L1 7313 7471 -173 2 1062 543 16 0 0 chr17 62650928 62650992 -32621659 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 1062 22 56 0 0 chr17 62651080 62651116 -32621535 + AT_rich Low_complexity Low_complexity 1 36 0 2 1062 3202 60 0 7 chr17 62651312 62651728 -32620923 + L1Md_F2 LINE L1 6169 6581 -1 2 1062 384 307 92 14 chr17 62651762 62651904 -32620747 - RSINE1 SINE B4 -11 154 2 2 1063 470 333 56 34 chr17 62652430 62652905 -32619746 + Lx9 LINE L1 6808 7461 -183 2 1063 485 44 0 14 chr17 62652908 62652977 -32619674 + (TG)n Simple_repeat Simple_repeat 2 69 0 2 1063 417 350 11 6 chr17 62653136 62653314 -32619337 - B3A SINE B2 -16 182 4 2 1063 591 15 0 0 chr17 62658189 62658257 -32614394 + (TG)n Simple_repeat Simple_repeat 2 69 0 2 1063 369 43 0 0 chr17 62658462 62658509 -32614142 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 1063 1549 289 46 14 chr17 62658596 62659157 -32613494 - Lx7 LINE L1 -393 7303 6725 2 1063 554 284 98 28 chr17 62659147 62659506 -32613145 - L1_Mur3 LINE L1 -2872 3008 2625 2 1063 736 195 189 0 chr17 62659559 62659718 -32612933 - B3 SINE B2 -25 191 3 2 1063 325 262 9 36 chr17 62659806 62659917 -32612734 + (TATG)n Simple_repeat Simple_repeat 4 111 0 2 1063 1128 181 8 46 chr17 62660037 62660297 -32612354 - Lx9 LINE L1 -188 7456 7207 2 1063 189 107 0 0 chr17 62660485 62660513 -32612138 + (TATG)n Simple_repeat Simple_repeat 1 28 0 2 1063 384 22 0 0 chr17 62660521 62660566 -32612085 + (CATA)n Simple_repeat Simple_repeat 2 46 0 2 1063 909 122 0 0 chr17 62660824 62660980 -32611671 + (GGA)n Simple_repeat Simple_repeat 1 156 0 2 1063 233 228 0 0 chr17 62662015 62662072 -32610579 + (TTTA)n Simple_repeat Simple_repeat 2 58 0 2 1063 3169 39 3 0 chr17 62662078 62662464 -32610187 - L1Md_F3 LINE L1 -2 6582 6196 2 1063 588 81 0 39 chr17 62663497 62663600 -32609051 + (TCTCCC)n Simple_repeat Simple_repeat 3 101 0 2 1063 810 75 0 0 chr17 62663621 62663728 -32608923 - B1_Mus2 SINE Alu 0 147 41 2 1063 258 180 125 39 chr17 62663664 62663768 -32608883 - RLTR25B LTR ERVK -519 509 397 2 1063 339 317 0 0 chr17 62663768 62663888 -32608763 + C-rich Low_complexity Low_complexity 4 123 0 2 1063 8841 9 2 0 chr17 62664375 62665369 -32607282 + L1Md_A LINE L1 5587 6582 0 2 1063 432 0 0 0 chr17 62667214 62667262 -32605389 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 2 1063 263 290 193 0 chr17 62669584 62669733 -32602918 + L1MB2 LINE L1 5511 5686 -494 2 1063 2139 175 43 5 chr17 62669780 62670177 -32602474 + MTC LTR MaLR 3 414 -7 2 1063 210 162 0 0 chr17 62670251 62670288 -32602363 + T-rich Low_complexity Low_complexity 1 37 0 2 1063 1327 71 22 0 chr17 62670295 62670478 -32602173 - L1Md_F2 LINE L1 -12 6570 6384 2 1063 618 316 31 24 chr17 62670481 62670773 -32601878 + L1MB2 LINE L1 5870 6163 -8 2 1063 8220 31 5 2 chr17 62670807 62672463 -32600188 - L1Md_F2 LINE L1 0 6582 4923 2 1063 369 0 0 0 chr17 62673500 62673541 -32599110 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1063 1954 185 40 0 chr17 62673973 62674325 -32598326 - ORR1D1 LTR MaLR 0 374 9 2 1063 1752 198 62 47 chr17 62674421 62674830 -32597821 + MTC LTR MaLR 2 407 -14 2 1063 4751 181 122 41 chr17 62674835 62675996 -32596655 + MTC-int LTR MaLR 1 1255 -3 2 1063 260 362 43 0 chr17 62676840 62676956 -32595695 - MIR SINE MIR -76 186 66 2 1063 234 81 0 0 chr17 62677507 62677544 -32595107 + (A)n Simple_repeat Simple_repeat 1 37 0 2 1063 594 103 0 0 chr17 62677597 62677684 -32594967 + (GGAA)n Simple_repeat Simple_repeat 3 89 0 2 1063 21 0 0 0 chr17 62679477 62679498 -32593153 + AT_rich Low_complexity Low_complexity 1 21 0 2 1063 954 211 58 10 chr17 62680188 62680394 -32592257 + B3 SINE B2 1 216 0 2 1063 192 152 0 0 chr17 62680575 62680608 -32592043 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1063 24 0 0 0 chr17 62681704 62681728 -32590923 + AT_rich Low_complexity Low_complexity 1 24 0 2 1063 207 227 0 29 chr17 62682061 62682129 -32590522 + T-rich Low_complexity Low_complexity 4 69 0 2 1063 5353 121 6 24 chr17 62682512 62683344 -32589307 + Lx3C LINE L1 6158 6974 -2 2 1063 299 130 19 0 chr17 62684505 62684559 -32588092 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1063 838 128 20 0 chr17 62684764 62684912 -32587739 + (TCTCCC)n Simple_repeat Simple_repeat 5 155 0 2 1063 315 289 0 12 chr17 62684919 62685003 -32587648 + CT-rich Low_complexity Low_complexity 1 83 0 2 1063 297 128 0 0 chr17 62686276 62686323 -32586328 + (T)n Simple_repeat Simple_repeat 1 47 0 2 1063 5097 99 39 15 chr17 62686324 62687121 -32585530 - Lx LINE L1 -1 6653 5838 2 1063 278 107 18 0 chr17 62688261 62688317 -32584334 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1063 519 275 68 28 chr17 62688966 62689142 -32583509 + MER20 DNA MER1_type 11 193 -26 2 1063 638 246 0 27 chr17 62692082 62692228 -32580423 + B1_Mur4 SINE Alu 2 143 -7 2 1063 500 143 10 0 chr17 62692229 62692327 -32580324 + (TA)n Simple_repeat Simple_repeat 2 100 0 2 1063 8477 23 2 0 chr17 62692425 62693587 -32579064 - L1Md_T LINE L1 0 6582 5418 2 1063 22 0 0 0 chr17 62693795 62693817 -32578834 + AT_rich Low_complexity Low_complexity 1 22 0 2 1063 426 252 10 0 chr17 62694397 62694500 -32578151 - B3 SINE B2 -112 104 1 2 1063 5932 67 37 2 chr17 62695067 62695873 -32576778 - L1_Mus3 LINE L1 -2 6636 5803 2 1063 363 60 0 0 chr17 62696481 62696531 -32576120 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1063 369 310 66 66 chr17 62696897 62697108 -32575543 + L1M4 LINE L1 2163 2373 -3773 2 1063 411 21 0 0 chr17 62697360 62697408 -32575243 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1063 349 211 165 11 chr17 62698216 62698307 -32574344 + MLT1A0 LTR MaLR 1 105 -260 2 1063 383 323 78 16 chr17 62698331 62698523 -32574128 + MLT1A0 LTR MaLR 151 354 -11 2 1063 435 176 0 0 chr17 62699449 62699540 -32573111 + CT-rich Low_complexity Low_complexity 1 91 0 2 1063 21 0 0 0 chr17 62699545 62699566 -32573085 + AT_rich Low_complexity Low_complexity 1 21 0 2 1063 4840 260 71 43 chr17 62699606 62702079 -32570572 - Lx7 LINE L1 -307 7389 4863 2 1063 374 203 0 13 chr17 62703429 62703504 -32569147 - MTD LTR MaLR 0 419 346 2 1063 246 262 0 15 chr17 62703900 62703966 -32568685 + GA-rich Low_complexity Low_complexity 3 67 0 2 1063 238 342 63 34 chr17 62703984 62704396 -32568255 + L1MEf LINE L1 916 1339 -4903 2 1063 624 261 134 27 chr17 62704485 62704709 -32567942 + B4 SINE B4 42 289 -3 2 1063 398 300 79 28 chr17 62704860 62705114 -32567537 + L1MEf LINE L1 1895 2161 -4081 2 1063 730 35 0 0 chr17 62705128 62705213 -32567438 - L1_Mus1 LINE L1 -127 6440 6356 2 1063 1022 53 0 45 chr17 62705214 62705371 -32567280 + L1Md_F2 LINE L1 6433 6582 0 2 1063 2895 152 17 2 chr17 62705629 62706102 -32566549 + Lx2 LINE L1 6416 6895 -102 2 1063 470 327 57 0 chr17 62706171 62706330 -32566321 + B4A SINE B4 1 168 -124 2 1063 189 74 0 0 chr17 62706332 62706359 -32566292 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1063 336 143 36 0 chr17 62706359 62706443 -32566208 + (TA)n Simple_repeat Simple_repeat 2 88 0 2 1063 242 248 137 25 chr17 62706617 62706778 -32565873 + L1MEf LINE L1 2789 2967 -3179 2 1063 271 301 63 82 chr17 62706902 62707061 -32565590 - MTD LTR MaLR -161 218 63 2 1063 365 317 58 24 chr17 62707280 62707487 -32565164 + L1M5 LINE L1 3426 3639 -2507 2 1063 3077 149 131 18 chr17 62708038 62708335 -32564316 - RMER6C LTR ERVK 0 690 377 2 1063 462 49 0 0 chr17 62708335 62708396 -32564255 + (TC)n Simple_repeat Simple_repeat 1 61 0 2 1063 3077 149 131 18 chr17 62708396 62708718 -32563933 - RMER6C LTR ERVK -314 376 1 2 1063 515 293 111 78 chr17 62708743 62709176 -32563475 + L1MCa LINE L1 1020 1466 -5042 2 1063 235 270 45 0 chr17 62709320 62709409 -32563242 + L1MCa LINE L1 1701 1793 -4624 2 1063 363 23 0 0 chr17 62709448 62709492 -32563159 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 3 1063 301 317 33 33 chr17 62709610 62709760 -32562891 + L1MCa LINE L1 1957 2106 -4402 2 1063 4915 111 17 14 chr17 62709837 62711022 -32561629 + Lx3C LINE L1 5133 6320 -656 3 1063 555 165 0 30 chr17 62711022 62711122 -32561529 + Lx3C LINE L1 6754 6850 -208 3 1063 29 0 0 0 chr17 62711425 62711454 -32561197 + AT_rich Low_complexity Low_complexity 1 29 0 3 1063 5770 101 47 17 chr17 62711681 62713337 -32559314 - L1VL1 LINE L1 -1807 1891 194 3 1063 2634 174 67 0 chr17 62713337 62713844 -32558807 - L1_Mm LINE L1 -769 5114 4574 3 1063 4552 85 11 0 chr17 62713843 62714795 -32557856 + L1_Mus2 LINE L1 5200 6164 -402 3 1063 769 76 68 0 chr17 62714795 62714927 -32557724 + L1_Mus2 LINE L1 6498 6638 0 3 1063 1116 93 0 0 chr17 62716880 62717237 -32555414 + (TG)n Simple_repeat Simple_repeat 1 357 0 3 1063 1274 202 111 3 chr17 62719752 62720040 -32552611 + ORR1D1 LTR MaLR 1 319 -55 3 1063 21 36 0 0 chr17 62720040 62720068 -32552583 + AT_rich Low_complexity Low_complexity 1 28 0 3 1063 22 35 0 0 chr17 62720196 62720225 -32552426 + AT_rich Low_complexity Low_complexity 1 29 0 3 1063 189 121 0 0 chr17 62720411 62720444 -32552207 + (T)n Simple_repeat Simple_repeat 1 33 0 3 1063 37146 14 1 6 chr17 62720446 62726641 -32546010 - L1Md_A LINE L1 0 6582 422 3 1063 306 183 33 0 chr17 62726642 62726702 -32545949 + ORR1D1 LTR MaLR 301 362 -8 3 1063 405 115 0 0 chr17 62728759 62728837 -32543814 + (GA)n Simple_repeat Simple_repeat 1 78 0 3 1063 198 0 0 0 chr17 62729553 62729575 -32543076 + (CAGA)n Simple_repeat Simple_repeat 2 23 0 3 1063 827 299 146 36 chr17 62729672 62730365 -32542286 - Arthur1B DNA Tip100 -76 1149 389 3 1063 469 346 112 4 chr17 62730540 62730798 -32541853 + B4A SINE B4 1 286 -6 3 1063 396 0 0 0 chr17 62730835 62730879 -32541772 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1063 553 222 175 16 chr17 62731554 62731737 -32540914 - B3 SINE B2 -3 213 2 3 1063 270 115 0 0 chr17 62734148 62734200 -32538451 + (A)n Simple_repeat Simple_repeat 1 52 0 3 1063 234 0 0 0 chr17 62734532 62734558 -32538093 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1063 265 252 76 30 chr17 62735355 62735486 -32537165 - Lx5 LINE L1 0 7050 6914 3 1063 607 133 0 0 chr17 62735507 62735605 -32537046 - L1_Mur2 LINE L1 -1540 4337 4240 3 1063 36252 31 0 1 chr17 62735620 62742300 -32530351 - L1Md_T LINE L1 0 6585 1 3 1063 865 121 75 45 chr17 62743010 62743209 -32529442 - Lx2A1 LINE L1 -4 7004 6800 3 1063 4638 229 96 17 chr17 62744006 62744060 -32528591 - Lx6 LINE L1 -11 7449 7401 3 1063 387 0 0 0 chr17 62744060 62744103 -32528548 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1063 4638 229 96 17 chr17 62744103 62744543 -32528108 - Lx6 LINE L1 -60 7400 6884 3 1063 312 27 0 0 chr17 62744543 62744580 -32528071 + (CCCCCA)n Simple_repeat Simple_repeat 5 41 0 3 1063 4638 229 96 17 chr17 62744580 62744710 -32527941 - Lx6 LINE L1 -577 6883 6751 3 1063 423 0 0 0 chr17 62744710 62744757 -32527894 + (GTTTG)n Simple_repeat Simple_repeat 1 47 0 3 1063 4638 229 96 17 chr17 62744757 62745386 -32527265 - Lx6 LINE L1 -710 6750 6097 3 1063 284 0 28 0 chr17 62745390 62745426 -32527225 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 1063 351 0 0 0 chr17 62745426 62745464 -32527187 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 1063 37833 22 0 8 chr17 62745836 62752079 -32520572 - L1Md_A LINE L1 0 6582 440 3 1063 1527 229 73 16 chr17 62753023 62753395 -32519256 - MTD LTR MaLR -14 405 13 3 1063 417 20 0 0 chr17 62753449 62753499 -32519152 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1063 707 299 6 6 chr17 62753501 62753666 -32518985 - B3A SINE B2 -29 169 5 3 1063 180 97 0 0 chr17 62754565 62754596 -32518055 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1063 23 78 0 0 chr17 62754706 62754757 -32517894 + AT_rich Low_complexity Low_complexity 1 51 0 3 1063 381 207 0 0 chr17 62755337 62755419 -32517232 + GA-rich Low_complexity Low_complexity 2 83 0 3 1063 821 140 5 38 chr17 62755451 62755636 -32517015 + GA-rich Low_complexity Low_complexity 2 180 0 3 1063 180 0 0 0 chr17 62755811 62755831 -32516820 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1063 1090 241 41 35 chr17 62755957 62756152 -32516499 + L1_Mur3 LINE L1 880 1087 -6641 3 1063 246 62 0 0 chr17 62756152 62756184 -32516467 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1063 405 0 0 0 chr17 62756184 62756228 -32516423 + (GA)n Simple_repeat Simple_repeat 2 46 0 3 1063 1178 213 95 19 chr17 62756228 62756737 -32515914 + L1_Mur3 LINE L1 1088 1626 -4254 3 1063 533 132 123 0 chr17 62756736 62756792 -32515859 - L1_Mur3 LINE L1 -4126 1754 1699 3 1063 228 67 0 0 chr17 62756792 62756822 -32515829 + (CTTTG)n Simple_repeat Simple_repeat 5 34 0 3 1063 533 132 123 0 chr17 62756822 62756879 -32515772 - L1_Mur3 LINE L1 -4182 1698 1628 3 1063 1969 186 85 31 chr17 62756876 62756905 -32515746 + L1_Mur3 LINE L1 3861 3889 -1991 3 1063 3575 73 10 4 chr17 62756905 62757387 -32515264 + L1Md_F2 LINE L1 6098 6582 0 3 1063 1969 186 85 31 chr17 62757387 62757874 -32514777 + L1_Mur3 LINE L1 3890 4405 -1475 3 1063 693 239 90 36 chr17 62757866 62758222 -32514429 + Lx9 LINE L1 1731 2105 -3742 3 1063 1516 222 63 41 chr17 62758270 62758637 -32514014 - MTD LTR MaLR -2 417 43 3 1063 1086 168 79 5 chr17 62758670 62758886 -32513765 + ORR1D1-int LTR MaLR 1129 1360 -10 3 1063 1459 236 13 59 chr17 62758896 62759287 -32513364 + ORR1D1 LTR MaLR 1 373 -1 3 1063 1871 217 25 41 chr17 62759342 62759458 -32513193 + Lx9 LINE L1 5294 5407 -440 3 1063 1761 197 50 16 chr17 62759458 62759839 -32512812 - ORR1B1 LTR MaLR 0 394 1 3 1063 1871 222 28 39 chr17 62759839 62760353 -32512298 + Lx9 LINE L1 5408 5950 -1694 3 1063 213 163 61 0 chr17 62760354 62760403 -32512248 + A-rich Low_complexity Low_complexity 3 54 0 3 1063 1693 291 128 27 chr17 62760440 62761193 -32511458 + Lx9 LINE L1 6110 6938 -706 3 1063 586 241 107 30 chr17 62761260 62761457 -32511194 + B3 SINE B2 5 216 0 3 1063 250 304 65 47 chr17 62761464 62761571 -32511080 + LTR85b LTR Gypsy? 9 117 -667 3 1063 318 270 89 38 chr17 62761778 62761936 -32510715 + L1MB3 LINE L1 5995 6160 -23 3 1063 502 299 54 45 chr17 62762617 62762841 -32509810 - Lx8 LINE L1 -4 7469 7244 3 1063 993 125 0 24 chr17 62762904 62763068 -32509583 + B2_Mm2 SINE B2 2 161 -34 3 1063 1732 100 92 4 chr17 62763069 62763350 -32509301 + Lx2 LINE L1 6691 6996 -1 3 1063 803 204 11 6 chr17 62763575 62763752 -32508899 - Lx2B LINE L1 -4 6996 6819 3 1063 192 77 0 0 chr17 62764436 62764462 -32508189 + (GAAA)n Simple_repeat Simple_repeat 2 27 0 3 1063 3448 50 9 11 chr17 62765148 62765597 -32507054 - L1_Mus3 LINE L1 -3 6635 6188 3 1063 288 0 0 0 chr17 62765669 62765701 -32506950 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1063 323 98 0 16 chr17 62765707 62765769 -32506882 + (TA)n Simple_repeat Simple_repeat 2 62 0 3 1063 299 220 0 0 chr17 62766402 62766461 -32506190 + U2 snRNA snRNA 1 59 -129 3 1063 233 272 60 36 chr17 62766733 62766817 -32505834 - MLT1K LTR MaLR -293 302 217 3 1063 23 0 0 0 chr17 62767282 62767305 -32505346 + GC_rich Low_complexity Low_complexity 1 23 0 3 1063 306 0 0 0 chr17 62767388 62767422 -32505229 + (TC)n Simple_repeat Simple_repeat 1 34 0 3 1063 378 0 0 0 chr17 62767422 62767463 -32505188 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1063 237 33 0 0 chr17 62767815 62767845 -32504806 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 3 1063 432 237 214 28 chr17 62769199 62769381 -32503270 - B3 SINE B2 0 216 1 3 1063 243 0 0 0 chr17 62769505 62769532 -32503119 + (TAA)n Simple_repeat Simple_repeat 1 27 0 3 1063 261 98 0 0 chr17 62769611 62769652 -32502999 + (CAAAA)n Simple_repeat Simple_repeat 3 43 0 3 1063 1119 274 269 18 chr17 62769654 62770221 -32502430 - Lx8 LINE L1 -251 7222 6514 3 1063 2243 216 34 30 chr17 62770233 62770735 -32501916 + ORR1D2-int LTR MaLR 853 1356 -14 3 1063 1012 279 105 30 chr17 62770740 62771072 -32501579 + ORR1D2 LTR MaLR 1 357 -13 3 1063 2169 256 58 17 chr17 62771084 62771773 -32500878 + Lx9 LINE L1 6333 7049 -595 3 1063 297 287 21 42 chr17 62771876 62772018 -32500633 + Lx9 LINE L1 7341 7479 -165 3 1063 225 324 68 52 chr17 62773036 62773160 -32499491 + MIR SINE MIR 76 199 -69 3 1063 332 312 258 16 chr17 62773460 62773762 -32498889 - MLT1J-int LTR MaLR -24 1363 990 3 1063 199 95 0 67 chr17 62773852 62773897 -32498754 + T-rich Low_complexity Low_complexity 2 43 0 3 1063 2547 153 38 17 chr17 62773935 62774406 -32498245 + Lx2B LINE L1 6515 6995 -5 3 1063 1075 293 23 33 chr17 62774417 62774900 -32497751 + Lx8 LINE L1 6830 7313 -383 3 1063 588 167 217 0 chr17 62775051 62775171 -32497480 + B1_Mus1 SINE Alu 2 147 -1 3 1063 183 114 0 0 chr17 62775172 62775207 -32497444 + (A)n Simple_repeat Simple_repeat 1 35 0 3 1063 393 117 0 0 chr17 62775304 62775364 -32497287 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 1063 299 282 12 12 chr17 62776551 62776658 -32495993 + L2a LINE L2 3269 3426 0 3 1063 326 284 0 0 chr17 62777437 62777539 -32495112 + L1MC LINE L1 5136 5237 -909 3 1063 393 22 0 0 chr17 62777635 62777681 -32494970 + (TCTCC)n Simple_repeat Simple_repeat 2 47 0 3 1063 516 72 0 0 chr17 62777863 62777932 -32494719 + (TAAA)n Simple_repeat Simple_repeat 2 70 0 3 1063 554 302 88 34 chr17 62778087 62778498 -32494153 + L1MC LINE L1 5332 5764 -569 3 1063 246 219 0 0 chr17 62778519 62778583 -32494068 + (CAGAGA)n Simple_repeat Simple_repeat 2 65 0 3 1063 2577 267 63 37 chr17 62778654 62779874 -32492777 + Lx8 LINE L1 2748 3999 -1881 3 1063 2052 257 86 88 chr17 62779883 62780935 -32491716 + Lx8 LINE L1 4522 5571 -309 3 1063 583 313 79 20 chr17 62780937 62781139 -32491512 + B3 SINE B2 1 214 -2 3 1063 2632 325 75 22 chr17 62781166 62782607 -32490044 + Lx8 LINE L1 5636 7129 -344 3 1063 384 59 0 0 chr17 62782607 62782658 -32489993 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1063 2632 325 75 22 chr17 62782658 62782833 -32489818 + Lx8 LINE L1 7130 7336 -137 3 1064 390 313 78 0 chr17 62784563 62784678 -32487973 - B1F1 SINE Alu -8 141 18 3 1064 2993 224 100 25 chr17 62784768 62785019 -32487632 - Lx7 LINE L1 0 7696 7412 3 1064 405 0 0 0 chr17 62785019 62785064 -32487587 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1064 2993 224 100 25 chr17 62785064 62785643 -32487008 - Lx7 LINE L1 -285 7411 6804 3 1064 215 277 204 19 chr17 62786311 62786473 -32486178 + MIRb SINE MIR 37 228 -40 3 1064 250 163 0 0 chr17 62786591 62786640 -32486011 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 1064 415 199 24 0 chr17 62786641 62786807 -32485844 + (CATATA)n Simple_repeat Simple_repeat 4 173 0 3 1064 234 225 17 28 chr17 62786827 62787012 -32485639 + (TA)n Simple_repeat Simple_repeat 1 182 0 3 1064 672 252 0 7 chr17 62787170 62787318 -32485333 + B1_Mur1 SINE Alu 2 148 -1 3 1064 534 16 0 0 chr17 62789718 62789781 -32482870 + (GA)n Simple_repeat Simple_repeat 2 64 0 3 1064 35 0 0 0 chr17 62789809 62789844 -32482807 + AT_rich Low_complexity Low_complexity 1 35 0 3 1064 440 338 144 26 chr17 62789905 62790321 -32482330 - L2 LINE L2 -422 2997 2533 3 1064 380 36 0 51 chr17 62791072 62791131 -32481520 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 3 1064 23 0 0 0 chr17 62791763 62791786 -32480865 + AT_rich Low_complexity Low_complexity 1 23 0 4 1064 247 362 22 67 chr17 62791799 62792024 -32480627 - Lx8 LINE L1 -217 7256 7042 4 1064 285 51 0 0 chr17 62792165 62792204 -32480447 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1064 418 345 27 7 chr17 62792404 62792550 -32480101 - MLT1J2 LTR MaLR -295 153 5 4 1064 4676 75 14 2 chr17 62793646 62794286 -32478365 - L1_Mus1 LINE L1 -285 6282 5635 4 1064 2184 61 0 25 chr17 62794286 62794571 -32478080 + L1_Mus1 LINE L1 6288 6565 -2 4 1064 230 263 0 0 chr17 62794695 62794752 -32477899 + B1F2 SINE Alu 2 58 -91 4 1064 790 310 11 25 chr17 62794874 62795158 -32477493 + B4A SINE B4 2 281 -11 4 1064 294 95 0 0 chr17 62795168 62795210 -32477441 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1064 235 350 43 120 chr17 62795411 62795719 -32476932 - L2a LINE L2 0 3426 3158 4 1064 584 279 65 65 chr17 62795719 62795934 -32476717 + B3 SINE B2 1 215 -1 4 1064 235 350 43 120 chr17 62795934 62796157 -32476494 - L2a LINE L2 -269 3157 2937 4 1064 252 0 0 0 chr17 62796177 62796205 -32476446 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 4 1064 245 356 39 0 chr17 62796239 62796343 -32476308 - L2a LINE L2 -596 2823 2716 4 1064 513 288 57 69 chr17 62796353 62796468 -32476183 + B3A SINE B2 2 118 -80 4 1064 1150 207 108 100 chr17 62796468 62796839 -32475812 - ORR1D1 LTR MaLR 0 374 1 4 1064 513 288 57 69 chr17 62796839 62796898 -32475753 + B3A SINE B2 119 174 -24 4 1064 800 319 105 0 chr17 62797121 62797453 -32475198 - L2a LINE L2 -908 2511 2145 4 1064 278 269 106 0 chr17 62799587 62799691 -32472960 - L1_Mur3 LINE L1 -6901 811 697 4 1064 551 15 0 14 chr17 62799728 62799797 -32472854 + (GGAA)n Simple_repeat Simple_repeat 3 70 0 4 1064 1178 191 26 63 chr17 62799812 62800191 -32472460 + Lx7 LINE L1 1404 1768 -4112 4 1064 234 261 14 0 chr17 62800190 62800259 -32472392 + Lx7 LINE L1 2738 2807 -3073 4 1064 1970 166 67 55 chr17 62800282 62800442 -32472209 + MTB_Mm LTR MaLR 1 181 -226 4 1064 2260 64 3 0 chr17 62800442 62800737 -32471914 + L1_Mus1 LINE L1 6272 6567 0 4 1064 1970 166 67 55 chr17 62800737 62800978 -32471673 + MTB_Mm LTR MaLR 182 407 0 4 1064 9865 189 63 88 chr17 62800983 62804042 -32468609 + Lx7 LINE L1 2837 5818 -62 4 1064 245 224 0 0 chr17 62804041 62804090 -32468561 + Lx7 LINE L1 6123 6171 -1525 4 1064 870 114 168 15 chr17 62804088 62804284 -32468367 - Lx2B LINE L1 -1 6999 6774 4 1064 885 167 128 11 chr17 62804291 62804479 -32468172 - MTC LTR MaLR -211 210 1 4 1064 1662 239 155 92 chr17 62804479 62804729 -32467922 + Lx7 LINE L1 6773 7030 -666 4 1064 4625 61 12 2 chr17 62804729 62805322 -32467329 + L1_Mus3 LINE L1 6039 6637 -1 4 1064 1662 239 155 92 chr17 62805322 62805681 -32466970 + Lx7 LINE L1 7031 7363 -333 4 1064 252 0 0 0 chr17 62805681 62805709 -32466942 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 4 1064 1662 239 155 92 chr17 62805709 62805772 -32466879 + Lx7 LINE L1 7364 7424 -272 4 1064 195 100 0 0 chr17 62805772 62805802 -32466849 + (TCTG)n Simple_repeat Simple_repeat 1 30 0 4 1064 1662 239 155 92 chr17 62805802 62805987 -32466664 + Lx7 LINE L1 7425 7685 -11 4 1064 1209 92 21 32 chr17 62805988 62806178 -32466473 - B2_Mm2 SINE B2 -6 189 2 4 1064 231 289 40 0 chr17 62806543 62806619 -32466032 + MIR SINE MIR 183 261 -1 4 1064 6053 68 2 0 chr17 62806686 62807531 -32465120 - L1_Mus2 LINE L1 -177 6389 5536 4 1064 236 235 0 0 chr17 62812046 62812097 -32460554 + MLT1F-int LTR MaLR 496 546 -943 4 1064 510 17 0 0 chr17 62812471 62812530 -32460121 + (GA)n Simple_repeat Simple_repeat 2 60 0 4 1064 276 208 0 77 chr17 62812813 62812891 -32459760 - MER102b DNA MER1_type -185 156 85 4 1064 306 0 0 0 chr17 62813075 62813109 -32459542 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 4 1064 407 167 102 85 chr17 62813109 62813227 -32459424 + RLTR15 LTR ERVK 2 121 -238 4 1064 393 22 0 0 chr17 62813875 62813921 -32458730 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1064 492 99 0 0 chr17 62814192 62814263 -32458388 + (T)n Simple_repeat Simple_repeat 1 71 0 4 1064 235 314 189 8 chr17 62816301 62816423 -32456228 - MIR SINE MIR -10 252 109 4 1064 373 333 88 62 chr17 62816437 62816677 -32455974 + MTEa LTR MaLR 1 246 -133 4 1064 234 0 0 0 chr17 62816945 62816971 -32455680 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1064 271 270 13 51 chr17 62817682 62817760 -32454891 - B4A SINE B4 -5 287 213 4 1064 23 0 0 0 chr17 62817782 62817805 -32454846 + AT_rich Low_complexity Low_complexity 1 23 0 4 1064 405 0 0 0 chr17 62817841 62817886 -32454765 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1064 443 279 66 47 chr17 62818073 62818284 -32454367 - B3 SINE B2 0 216 2 4 1064 939 256 27 9 chr17 62818291 62818512 -32454139 - B4A SINE B4 -67 225 1 4 1064 549 342 82 95 chr17 62818907 62819308 -32453343 - MLT1M LTR MaLR -271 401 6 4 1064 268 325 149 40 chr17 62819627 62819976 -32452675 + L2 LINE L2 2297 2683 -736 4 1064 347 272 32 11 chr17 62820333 62820426 -32452225 + PB1D10 SINE Alu 18 112 -5 4 1064 21 0 0 0 chr17 62820680 62820701 -32451950 + AT_rich Low_complexity Low_complexity 1 21 0 4 1064 358 196 19 0 chr17 62822860 62822967 -32449684 + GA-rich Low_complexity Low_complexity 2 110 0 4 1064 1993 213 25 53 chr17 62823061 62823492 -32449159 - MTD LTR MaLR 0 419 1 4 1064 636 14 0 0 chr17 62824403 62824476 -32448175 + (GGA)n Simple_repeat Simple_repeat 3 75 0 4 1064 564 194 97 30 chr17 62824477 62824642 -32448009 - MTD LTR MaLR -46 373 198 4 1064 614 283 37 3 chr17 62825019 62825292 -32447359 - L1MB1 LINE L1 -361 5828 5520 4 1064 385 380 0 0 chr17 62825310 62825418 -32447233 + RSINE1 SINE B4 42 149 -16 4 1064 210 71 0 0 chr17 62825451 62825479 -32447172 + (GA)n Simple_repeat Simple_repeat 2 29 0 4 1064 24 32 0 0 chr17 62825487 62825518 -32447133 + AT_rich Low_complexity Low_complexity 1 31 0 4 1064 829 286 122 94 chr17 62825782 62826175 -32446476 - MTD LTR MaLR -14 405 2 4 1064 3065 197 89 29 chr17 62827543 62827894 -32444757 + Lx9 LINE L1 6772 7140 -504 4 1064 2568 54 6 0 chr17 62827894 62828210 -32444441 + L1_Mus1 LINE L1 6247 6564 -3 4 1064 3065 197 89 29 chr17 62828210 62828680 -32443971 + Lx9 LINE L1 7141 7642 -2 4 1064 2062 141 46 36 chr17 62829159 62829549 -32443102 - ORR1B1 LTR MaLR 0 394 1 4 1064 301 356 93 51 chr17 62829557 62829868 -32442783 + ORR1E LTR MaLR 35 358 -1 4 1064 1062 93 0 0 chr17 62830324 62830464 -32442187 + B1_Mus1 SINE Alu 9 148 0 4 1064 516 214 11 6 chr17 62830590 62830769 -32441882 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1064 379 333 39 63 chr17 62830771 62831075 -32441576 - RSINE1 SINE B4 0 292 8 4 1064 287 296 177 65 chr17 62831414 62831754 -32440897 - MLT1D LTR MaLR 0 390 31 4 1064 279 324 65 0 chr17 62832369 62832477 -32440174 + MLT2D LTR ERVL 33 147 -267 4 1064 359 322 25 43 chr17 62832844 62833006 -32439645 - L2 LINE L2 -971 2448 2290 4 1064 339 360 132 5 chr17 62833026 62833230 -32439421 - MIRb SINE MIR -38 230 1 4 1064 257 264 36 54 chr17 62833486 62833598 -32439053 + L1M5 LINE L1 5614 5723 -401 4 1064 26 0 0 0 chr17 62834072 62834098 -32438553 + AT_rich Low_complexity Low_complexity 1 26 0 4 1064 295 164 36 0 chr17 62834153 62834208 -32438443 + AmnSINE1 SINE SINE 517 573 -2 4 1064 522 0 0 0 chr17 62834485 62834543 -32438108 + (GGAA)n Simple_repeat Simple_repeat 1 58 0 4 1064 441 0 0 0 chr17 62835170 62835219 -32437432 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 4 1064 386 38 0 19 chr17 62835812 62835865 -32436786 + (TA)n Simple_repeat Simple_repeat 1 52 0 4 1064 421 360 41 0 chr17 62836607 62836754 -32435897 + RSINE1 SINE B4 12 164 -1 4 1064 489 104 0 0 chr17 62836767 62836844 -32435807 + (CA)n Simple_repeat Simple_repeat 1 77 0 4 1064 22 35 0 0 chr17 62836848 62836877 -32435774 + AT_rich Low_complexity Low_complexity 1 29 0 4 1064 1100 282 51 101 chr17 62837614 62838146 -32434505 - Lx8 LINE L1 -1396 6077 5596 4 1064 560 208 16 16 chr17 62838146 62838268 -32434383 - Lx7 LINE L1 -3 7693 7572 4 1064 1100 270 39 145 chr17 62838268 62838436 -32434215 - Lx8 LINE L1 -285 5595 5441 4 1064 192 77 0 0 chr17 62838436 62838462 -32434189 + (CTTG)n Simple_repeat Simple_repeat 2 27 0 4 1064 1100 270 42 138 chr17 62838462 62838776 -32433875 - Lx8 LINE L1 -440 5440 5169 4 1064 509 147 11 0 chr17 62838803 62838898 -32433753 + CT-rich Low_complexity Low_complexity 2 97 0 4 1064 1436 276 110 11 chr17 62838903 62839495 -32433156 + Lx8 LINE L1 6791 7452 -21 4 1064 21 0 0 0 chr17 62839661 62839682 -32432969 + AT_rich Low_complexity Low_complexity 1 21 0 4 1064 25 31 0 0 chr17 62839912 62839944 -32432707 + AT_rich Low_complexity Low_complexity 1 32 0 4 1064 297 201 178 0 chr17 62841001 62841069 -32431582 + B1F2 SINE Alu 12 90 -59 4 1064 1753 201 112 6 chr17 62841732 62842134 -32430517 + RMER1B Other Other 495 910 -156 4 1064 449 191 16 84 chr17 62842274 62842422 -32430229 + RMER1B Other Other 857 1040 -26 4 1064 446 96 14 0 chr17 62842422 62842495 -32430156 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 4 1064 251 303 78 49 chr17 62842623 62842828 -32429823 - MLT1B LTR MaLR -116 274 64 4 1064 587 335 36 0 chr17 62843345 62843539 -32429112 + B3 SINE B2 5 205 -11 4 1064 534 31 0 0 chr17 62843543 62843607 -32429044 + (GA)n Simple_repeat Simple_repeat 2 65 0 4 1064 584 305 142 36 chr17 62845237 62845567 -32427084 + MTEa LTR MaLR 1 365 -14 4 1064 419 341 23 12 chr17 62845613 62845785 -32426866 + MER5B DNA MER1_type 2 175 -3 4 1064 4732 8 2 0 chr17 62845824 62846316 -32426335 - MT2_Mm LTR ERVL 0 493 1 4 1064 301 296 55 16 chr17 62846318 62846445 -32426206 + MER5A1 DNA MER1_type 27 158 -8 4 1064 188 67 0 32 chr17 62846587 62846618 -32426033 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 4 1064 1886 205 16 21 chr17 62847015 62847389 -32425262 - ORR1D1 LTR MaLR -2 372 1 4 1064 320 294 0 0 chr17 62848606 62848674 -32423977 + ID4_ SINE ID 1 68 -15 4 1064 1048 103 0 12 chr17 62848705 62848872 -32423779 + (GGAA)n Simple_repeat Simple_repeat 3 167 0 4 1064 1805 220 82 13 chr17 62849162 62849554 -32423097 + MTD LTR MaLR 1 419 0 4 1064 1438 82 22 0 chr17 62849764 62849948 -32422703 - B2_Mm1t SINE B2 -5 188 1 4 1064 3217 104 5 9 chr17 62850118 62850564 -32422087 - Lx2A LINE L1 -5 7003 6560 4 1064 500 30 15 0 chr17 62850650 62850716 -32421935 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 1064 620 310 67 7 chr17 62851947 62852230 -32420421 + Lx8 LINE L1 6915 7214 -259 4 1064 226 264 132 0 chr17 62853226 62853317 -32419334 - MIRc SINE MIR -43 225 123 5 1064 216 0 0 0 chr17 62853811 62853835 -32418816 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1064 216 200 0 0 chr17 62853890 62853935 -32418716 + T-rich Low_complexity Low_complexity 1 45 0 5 1064 232 140 19 74 chr17 62854033 62854087 -32418564 + L2c LINE L2 3335 3385 -2 5 1064 194 348 121 14 chr17 62855580 62855720 -32416931 + L2b LINE L2 2753 2907 -512 5 1064 752 167 8 0 chr17 62855789 62855909 -32416742 + URR1B DNA MER1_type 3 123 -102 5 1064 738 191 264 0 chr17 62855950 62856128 -32416523 - URR1B DNA MER1_type 0 225 1 5 1064 195 306 23 34 chr17 62856409 62856497 -32416154 + L2b LINE L2 3287 3373 -2 5 1064 225 0 0 0 chr17 62856881 62856906 -32415745 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 1064 204 125 0 0 chr17 62857173 62857205 -32415446 + (TGG)n Simple_repeat Simple_repeat 1 32 0 5 1064 315 0 0 0 chr17 62858002 62858037 -32414614 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1064 309 51 0 0 chr17 62858305 62858344 -32414307 + (TTTTG)n Simple_repeat Simple_repeat 5 43 0 5 1064 280 261 56 11 chr17 62859453 62859542 -32413109 + PB1D7 SINE Alu 28 120 0 5 1064 901 244 165 16 chr17 62859980 62860222 -32412429 + B4 SINE B4 3 280 -12 5 1064 551 15 15 0 chr17 62860285 62860353 -32412298 + (GA)n Simple_repeat Simple_repeat 2 70 0 5 1064 207 170 0 0 chr17 62860483 62860530 -32412121 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 5 1064 22 0 0 0 chr17 62860700 62860722 -32411929 + AT_rich Low_complexity Low_complexity 1 22 0 5 1064 252 298 81 81 chr17 62860848 62861034 -32411617 - MIRb SINE MIR -47 221 36 5 1064 765 122 0 0 chr17 62861213 62861360 -32411291 + (TG)n Simple_repeat Simple_repeat 2 148 0 5 1064 201 349 24 0 chr17 62861362 62861445 -32411206 + (CATG)n Simple_repeat Simple_repeat 1 85 0 5 1064 180 0 0 0 chr17 62862611 62862631 -32410020 + (CCA)n Simple_repeat Simple_repeat 1 20 0 5 1064 246 230 13 39 chr17 62862695 62862772 -32409879 + GA-rich Low_complexity Low_complexity 2 76 0 5 1064 360 64 0 0 chr17 62862962 62863009 -32409642 + (T)n Simple_repeat Simple_repeat 1 47 0 5 1064 360 0 0 0 chr17 62863328 62863368 -32409283 + (A)n Simple_repeat Simple_repeat 1 40 0 5 1064 192 97 0 0 chr17 62863820 62863851 -32408800 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 5 1064 198 118 0 0 chr17 62864256 62864290 -32408361 + (GA)n Simple_repeat Simple_repeat 2 35 0 5 1064 767 326 47 47 chr17 62864650 62864972 -32407679 + MLT1A0 LTR MaLR 36 357 -8 5 1064 243 260 0 0 chr17 62865477 62865527 -32407124 - B1_Mur4 SINE Alu -87 63 14 5 1064 378 288 16 25 chr17 62866031 62866152 -32406499 + LTR82B Low_complexity ERVL 22 141 -689 5 1064 541 318 53 32 chr17 62866092 62866339 -32406312 + LTR82B Low_complexity ERVL 133 384 -446 5 1064 186 118 0 0 chr17 62866626 62866660 -32405991 + (ATG)n Simple_repeat Simple_repeat 1 34 0 5 1064 510 17 0 0 chr17 62866899 62866958 -32405693 + (TTTC)n Simple_repeat Simple_repeat 4 62 0 5 1064 1119 80 0 0 chr17 62866958 62867095 -32405556 - B1_Mus1 SINE Alu -11 137 1 5 1064 183 42 0 0 chr17 62868010 62868034 -32404617 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 1064 186 43 0 0 chr17 62869733 62869756 -32402895 + (C)n Simple_repeat Simple_repeat 1 23 0 5 1064 282 29 0 0 chr17 62869953 62869988 -32402663 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1064 1066 250 58 22 chr17 62871706 62871984 -32400667 + B4A SINE B4 3 290 -2 5 1064 353 305 96 73 chr17 62872187 62872406 -32400245 - MLT1D LTR MaLR -247 258 35 5 1064 989 235 101 0 chr17 62872534 62872961 -32399690 + MT2A LTR ERVL 1 470 -63 5 1064 537 58 0 0 chr17 62872966 62873035 -32399616 + (CCCCCT)n Simple_repeat Simple_repeat 1 69 0 5 1064 792 0 0 0 chr17 62873107 62873195 -32399456 + (GGAAA)n Simple_repeat Simple_repeat 1 88 0 5 1064 367 250 82 18 chr17 62873602 62873712 -32398939 - ERVL-E-int LTR ERVL -1405 4262 4146 5 1064 250 350 80 73 chr17 62874162 62874560 -32398091 + LTR16A1 LTR ERVL 51 451 -5 5 1064 297 317 97 58 chr17 62875735 62876008 -32396643 + L2c LINE L2 2918 3188 -199 5 1064 830 279 20 4 chr17 62876385 62876630 -32396021 + L1MA9 LINE L1 5383 5631 -681 5 1064 510 260 0 0 chr17 62876637 62876741 -32395910 - ID_B1 SINE B4 -2 222 119 5 1064 182 174 22 0 chr17 62876869 62876915 -32395736 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1064 1067 288 149 0 chr17 62876989 62877419 -32395232 + L1MA9 LINE L1 5810 6303 -9 5 1064 180 329 0 28 chr17 62878634 62878706 -32393945 - MIR SINE MIR -23 239 170 5 1064 279 343 147 21 chr17 62880802 62880945 -32391706 + RSINE1 SINE B4 3 163 -2 5 1064 910 232 22 30 chr17 62881204 62881435 -32391216 + Lx6 LINE L1 7178 7406 -54 5 1064 751 218 76 6 chr17 62881437 62881608 -32391043 + B3 SINE B2 34 216 0 5 1064 365 264 0 98 chr17 62881647 62881769 -32390882 + RMER1B Other Other 1 110 -956 5 1064 2552 161 162 0 chr17 62881768 62882291 -32390360 + RMER1B Other Other 459 1066 0 5 1064 25 0 0 0 chr17 62882535 62882560 -32390091 + AT_rich Low_complexity Low_complexity 1 25 0 5 1064 1464 206 18 125 chr17 62882583 62882821 -32389830 - Lx7 LINE L1 -156 7540 7344 5 1064 333 0 0 0 chr17 62882821 62882858 -32389793 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1064 1464 206 18 125 chr17 62882858 62883074 -32389577 - Lx7 LINE L1 -353 7343 7135 5 1064 448 155 10 30 chr17 62883110 62883210 -32389441 + (TA)n Simple_repeat Simple_repeat 2 99 0 5 1064 462 200 9 43 chr17 62883211 62883326 -32389325 + L1_Mur3 LINE L1 5268 5378 -502 5 1064 7126 172 78 24 chr17 62883307 62884370 -32388281 - L1_Mur3 LINE L1 -1748 4132 2996 5 1064 279 0 0 0 chr17 62884370 62884401 -32388250 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1064 7126 172 78 24 chr17 62884401 62884860 -32387791 - L1_Mur3 LINE L1 -2885 2995 2528 5 1064 595 163 54 0 chr17 62884863 62884989 -32387662 + ORR1B2 LTR MaLR 4 125 -221 5 1064 6467 169 54 31 chr17 62885008 62886288 -32386363 + ORR1B2-int LTR MaLR 15 1323 -186 5 1064 446 125 0 0 chr17 62886379 62886443 -32386208 - ORR1B2 LTR MaLR 0 367 304 5 1064 563 112 0 0 chr17 62886451 62886531 -32386120 + L1_Mur3 LINE L1 2454 2533 -3347 5 1064 4970 195 29 28 chr17 62886530 62888093 -32384558 - L1_Mur3 LINE L1 -3394 2486 301 5 1064 634 295 44 0 chr17 62888115 62888298 -32384353 - Lx8 LINE L1 -115 7358 7168 5 1064 304 77 39 0 chr17 62889294 62889346 -32383305 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 1064 223 208 42 0 chr17 62889346 62889394 -32383257 + PB1 SINE Alu 75 124 -3 5 1064 249 163 0 0 chr17 62889912 62889961 -32382690 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1064 666 279 96 5 chr17 62890119 62890339 -32382312 - MIR SINE MIR -14 248 9 5 1064 184 253 71 71 chr17 62890462 62890547 -32382104 - MIRb SINE MIR -107 161 77 5 1064 536 270 74 19 chr17 62890552 62890767 -32381884 + ALINE LINE RTE 185 411 -206 5 1064 577 353 50 12 chr17 62891378 62891636 -32381015 + MLT1C LTR MaLR 200 467 0 5 1064 587 175 8 0 chr17 62891983 62892103 -32380548 + CT-rich Low_complexity Low_complexity 3 123 0 5 1064 984 145 73 28 chr17 62892110 62892287 -32380364 - Lx3B LINE L1 -4 6969 6785 5 1064 243 235 143 56 chr17 62892522 62892648 -32380003 - MLT1C LTR MaLR -225 242 106 5 1064 309 375 7 7 chr17 62893414 62893551 -32379100 + L4 LINE RTE 1425 1561 -468 5 1064 22 56 0 0 chr17 62894421 62894457 -32378194 + AT_rich Low_complexity Low_complexity 1 36 0 5 1064 201 64 41 41 chr17 62895217 62895266 -32377385 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 5 1064 39 22 0 0 chr17 62896991 62897037 -32375614 + AT_rich Low_complexity Low_complexity 1 46 0 5 1064 1993 156 0 66 chr17 62897679 62898028 -32374623 - ORR1A3 LTR MaLR 0 326 1 5 1064 243 151 42 21 chr17 62898051 62898146 -32374505 + (TA)n Simple_repeat Simple_repeat 2 98 0 5 1064 332 338 247 47 chr17 62898172 62898510 -32374141 + MLT1A1 LTR MaLR 3 387 -21 5 1064 369 0 0 0 chr17 62898992 62899033 -32373618 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1064 465 321 86 35 chr17 62899095 62899292 -32373359 - MLT1J2 LTR MaLR -3 445 239 5 1064 456 358 88 28 chr17 62899463 62899851 -32372800 - MLT1J2-int LTR MaLR -68 1319 909 5 1064 1448 228 92 12 chr17 62900148 62900494 -32372157 + ORR1D1 LTR MaLR 1 374 0 5 1064 395 324 174 62 chr17 62900497 62901027 -32371624 - MLT1J2-int LTR MaLR -627 760 172 5 1064 267 289 81 126 chr17 62901276 62901467 -32371184 - ORR1E LTR MaLR -19 340 175 5 1064 837 20 0 0 chr17 62901467 62901566 -32371085 + (GGGA)n Simple_repeat Simple_repeat 2 100 0 5 1064 267 289 81 126 chr17 62901566 62901635 -32371016 - ORR1E LTR MaLR -185 174 92 5 1064 328 303 13 0 chr17 62902416 62902492 -32370159 + ID4 SINE ID 7 83 0 5 1064 499 327 74 14 chr17 62903665 62903882 -32368769 - MIR SINE MIR -12 250 21 5 1064 685 343 45 32 chr17 62904426 62904772 -32367879 - Tigger5 DNA MER2_type -3 363 8 5 1064 229 355 13 23 chr17 62905767 62905919 -32366732 - MLT1B LTR MaLR -10 457 264 5 1064 301 288 86 17 chr17 62906095 62906328 -32366323 - Lx9 LINE L1 -15 7629 7381 5 1064 744 261 45 59 chr17 62907770 62907990 -32364661 - ID_B1 SINE B4 -7 217 1 5 1064 401 295 98 8 chr17 62908272 62908395 -32364256 + B1_Mur2 SINE Alu 15 148 -1 5 1064 1205 74 0 13 chr17 62908403 62908553 -32364098 + B1_Mus1 SINE Alu 1 148 0 5 1064 207 188 0 0 chr17 62908553 62908601 -32364050 + A-rich Low_complexity Low_complexity 1 48 0 5 1064 24 0 0 0 chr17 62909143 62909167 -32363484 + AT_rich Low_complexity Low_complexity 1 24 0 5 1064 261 339 41 8 chr17 62909939 62910061 -32362590 - MLT1K LTR MaLR -8 587 462 5 1064 1403 195 45 4 chr17 62910256 62910503 -32362148 + Lx5 LINE L1 6776 7032 -18 5 1064 264 289 33 58 chr17 62911421 62911542 -32361109 + MIR SINE MIR 101 218 -44 5 1064 190 228 25 12 chr17 62911583 62911663 -32360988 + CT-rich Low_complexity Low_complexity 4 84 0 5 1064 22 0 0 0 chr17 62912332 62912354 -32360297 + AT_rich Low_complexity Low_complexity 1 22 0 5 1064 360 242 0 0 chr17 62912652 62912718 -32359933 - tRNA-Ala-GCY_ tRNA tRNA -7 68 3 6 1064 483 252 46 30 chr17 62912724 62912855 -32359796 - ID_B1 SINE B4 -2 222 90 6 1064 246 174 0 0 chr17 62912915 62912961 -32359690 + T-rich Low_complexity Low_complexity 1 46 0 6 1064 297 281 33 0 chr17 62912993 62913085 -32359566 - PB1D10 SINE Alu -21 96 2 6 1064 400 269 98 0 chr17 62913672 62913794 -32358857 + B1F1 SINE Alu 7 141 -8 6 1064 975 157 4 25 chr17 62913795 62914055 -32358596 + GA-rich Low_complexity Low_complexity 1 254 0 6 1065 1398 77 0 4 chr17 62914799 62915071 -32357580 + (TTCC)n Simple_repeat Simple_repeat 1 270 0 6 1065 834 258 27 31 chr17 62915071 62915295 -32357356 - ID_B1 SINE B4 -1 223 1 6 1065 243 0 0 0 chr17 62915513 62915540 -32357111 + (T)n Simple_repeat Simple_repeat 1 27 0 6 1065 195 42 0 0 chr17 62917380 62917404 -32355247 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 1065 686 303 110 44 chr17 62918813 62919287 -32353364 - MT2A LTR ERVL -5 510 1 6 1065 776 297 140 25 chr17 62919485 62919806 -32352845 + Tigger7 DNA MER2_type 10 367 -2124 6 1065 456 389 72 22 chr17 62920131 62920452 -32352199 - MLT1K LTR MaLR -245 350 14 6 1065 227 150 17 0 chr17 62920454 62920514 -32352137 + (TA)n Simple_repeat Simple_repeat 2 62 0 6 1065 322 235 177 11 chr17 62920905 62921086 -32351565 - L1M4b LINE L1 -5218 2116 1906 6 1065 387 0 0 0 chr17 62921255 62921298 -32351353 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 1065 608 237 110 7 chr17 62921302 62921438 -32351213 - B3A SINE B2 -48 150 1 6 1065 609 323 50 16 chr17 62921452 62921773 -32350878 - L1M4b LINE L1 -5685 1649 1318 6 1065 299 25 25 0 chr17 62921796 62921836 -32350815 + (GGTTG)n Simple_repeat Simple_repeat 4 44 0 6 1065 274 279 53 76 chr17 62922470 62922641 -32350010 - L1M4b LINE L1 -6438 896 730 6 1065 361 320 105 30 chr17 62922684 62922951 -32349700 - L1M4b LINE L1 -6676 658 372 6 1065 227 310 100 33 chr17 62923020 62923140 -32349511 - L1M4b LINE L1 -7048 286 159 6 1065 243 0 0 0 chr17 62923149 62923176 -32349475 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 6 1065 1340 38 0 0 chr17 62923176 62923335 -32349316 - B2_Mm1a SINE B2 -33 160 2 6 1065 843 100 0 37 chr17 62923371 62923558 -32349093 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 1065 1025 255 52 31 chr17 62923733 62924024 -32348627 - L3b LINE CR1 -4 478 182 6 1065 188 268 0 0 chr17 62924273 62924314 -32348337 + MER5A DNA MER1_type 55 95 -94 6 1065 300 347 45 32 chr17 62924822 62924899 -32347752 - ID_B1 SINE B4 -62 162 6 6 1065 368 269 0 0 chr17 62924899 62924977 -32347674 - ID4 SINE ID 0 83 6 6 1065 323 154 15 0 chr17 62924991 62925056 -32347595 + CT-rich Low_complexity Low_complexity 2 67 0 6 1065 22 35 0 0 chr17 62925093 62925122 -32347529 + AT_rich Low_complexity Low_complexity 1 29 0 6 1065 207 0 0 0 chr17 62925579 62925602 -32347049 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1065 968 264 26 32 chr17 62925828 62926137 -32346514 - Lx6 LINE L1 -31 7429 7123 6 1065 205 182 0 0 chr17 62926297 62926341 -32346310 + T-rich Low_complexity Low_complexity 1 44 0 6 1065 2887 39 138 0 chr17 62926350 62926711 -32345940 - IAPLTR2a LTR ERVK 0 411 1 6 1065 22 0 0 0 chr17 62928803 62928825 -32343826 + AT_rich Low_complexity Low_complexity 1 22 0 6 1065 213 65 0 0 chr17 62929902 62929933 -32342718 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 1065 224 59 0 29 chr17 62929933 62929967 -32342684 + (CG)n Simple_repeat Simple_repeat 2 35 0 6 1065 1865 76 0 52 chr17 62929982 62930233 -32342418 + L1_Mus1 LINE L1 6330 6567 0 6 1065 287 354 0 0 chr17 62931005 62931087 -32341564 + ID4_ SINE ID 2 83 0 6 1065 21 36 0 0 chr17 62931477 62931505 -32341146 + AT_rich Low_complexity Low_complexity 1 28 0 6 1065 1128 15 0 0 chr17 62932089 62932219 -32340432 + (TCTCCC)n Simple_repeat Simple_repeat 2 131 0 6 1065 462 114 0 0 chr17 62932221 62932291 -32340360 + (TA)n Simple_repeat Simple_repeat 2 71 0 6 1065 6584 173 40 17 chr17 62932314 62933505 -32339146 - Lx9 LINE L1 -1 7643 6426 6 1065 1050 112 0 0 chr17 62933683 62933817 -32338834 + B1_Mus1 SINE Alu 2 135 -13 6 1065 180 0 0 0 chr17 62933820 62933840 -32338811 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 6 1065 452 251 178 28 chr17 62933880 62934060 -32338591 + B3 SINE B2 1 207 -9 6 1065 216 0 0 0 chr17 62935665 62935689 -32336962 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1065 837 151 155 5 chr17 62936368 62936555 -32336096 - Lx7 LINE L1 0 7696 7482 6 1065 2011 189 50 65 chr17 62936571 62937433 -32335218 - RMER6A LTR ERVK -17 739 1 6 1065 231 36 0 0 chr17 62937450 62937478 -32335173 + (CAA)n Simple_repeat Simple_repeat 3 30 0 6 1065 1695 239 25 70 chr17 62937480 62937993 -32334658 - Lx7 LINE L1 -203 7493 7004 6 1065 2198 200 36 3 chr17 62938505 62939093 -32333558 - Lx7 LINE L1 -1598 6098 5491 6 1065 396 0 0 0 chr17 62939311 62939355 -32333296 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1065 684 200 17 0 chr17 62939563 62939738 -32332913 + CT-rich Low_complexity Low_complexity 3 180 0 6 1065 375 23 0 0 chr17 62940916 62940960 -32331691 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1065 22 0 0 0 chr17 62941998 62942020 -32330631 + AT_rich Low_complexity Low_complexity 1 22 0 6 1065 25 0 0 0 chr17 62942052 62942077 -32330574 + AT_rich Low_complexity Low_complexity 1 25 0 6 1065 234 128 0 0 chr17 62942362 62942401 -32330250 + (TCC)n Simple_repeat Simple_repeat 2 40 0 6 1065 2529 110 36 23 chr17 62943998 62944390 -32328261 + Lx2 LINE L1 6600 6996 -1 6 1065 222 222 0 0 chr17 62944578 62944632 -32328019 + T-rich Low_complexity Low_complexity 1 54 0 6 1065 5126 25 0 3 chr17 62944641 62945233 -32327418 - L1Md_F3 LINE L1 -1 6583 5994 6 1065 236 30 0 29 chr17 62945276 62945310 -32327341 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 6 1065 775 178 13 33 chr17 62946012 62946163 -32326488 + B1_Mur3 SINE Alu 1 148 -1 6 1065 225 65 0 0 chr17 62946188 62946219 -32326432 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 6 1065 928 149 11 0 chr17 62946233 62946407 -32326244 + GA-rich Low_complexity Low_complexity 1 176 0 6 1065 186 43 0 0 chr17 62946477 62946500 -32326151 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 6 1065 219 170 64 0 chr17 62947710 62947757 -32324894 + G-rich Low_complexity Low_complexity 2 51 0 6 1065 612 275 136 42 chr17 62947785 62948093 -32324558 + MER2 DNA MER2_type 1 337 -8 6 1065 261 0 0 0 chr17 62948847 62948876 -32323775 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1065 21 0 0 0 chr17 62952400 62952421 -32320230 + AT_rich Low_complexity Low_complexity 1 21 0 6 1065 189 0 0 0 chr17 62952788 62952809 -32319842 + (TGGGGG)n Simple_repeat Simple_repeat 6 26 0 6 1065 693 45 0 0 chr17 62952809 62952897 -32319754 + (GA)n Simple_repeat Simple_repeat 1 89 0 6 1065 183 114 0 0 chr17 62953605 62953640 -32319011 + (T)n Simple_repeat Simple_repeat 1 35 0 6 1065 198 103 0 0 chr17 62954077 62954106 -32318545 + (T)n Simple_repeat Simple_repeat 1 29 0 6 1065 186 43 0 0 chr17 62955843 62955866 -32316785 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 6 1065 216 0 0 0 chr17 62956030 62956054 -32316597 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1065 249 33 0 0 chr17 62959308 62959338 -32313313 + (A)n Simple_repeat Simple_repeat 1 30 0 6 1065 567 0 0 0 chr17 62960196 62960259 -32312392 + (GA)n Simple_repeat Simple_repeat 2 64 0 6 1065 1246 41 0 0 chr17 62960259 62960406 -32312245 + B1_Mm SINE Alu 1 147 0 6 1065 917 141 9 27 chr17 62960418 62960750 -32311901 + GA-rich Low_complexity Low_complexity 1 325 0 6 1065 198 0 0 0 chr17 62961544 62961566 -32311085 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 6 1065 656 56 0 0 chr17 62961848 62961937 -32310714 - B1_Mur4 SINE Alu 0 150 62 6 1065 288 345 14 89 chr17 62965936 62966149 -32306502 + MLT1F2 LTR MaLR 5 201 -359 6 1065 288 77 0 0 chr17 62967440 62967479 -32305172 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 6 1065 186 43 0 0 chr17 62967678 62967701 -32304950 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 6 1065 287 242 15 0 chr17 62967807 62967873 -32304778 - ID4 SINE ID -16 67 1 6 1065 240 35 0 0 chr17 62969130 62969159 -32303492 + (TCCA)n Simple_repeat Simple_repeat 2 30 0 6 1065 220 229 0 0 chr17 62969437 62969485 -32303166 + MIR SINE MIR 81 128 -134 6 1065 258 32 0 0 chr17 62969655 62969686 -32302965 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 6 1065 228 135 0 0 chr17 62969690 62969727 -32302924 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 1065 189 0 0 0 chr17 62970296 62970317 -32302334 + (A)n Simple_repeat Simple_repeat 1 21 0 6 1065 252 0 0 0 chr17 62970332 62970360 -32302291 + (T)n Simple_repeat Simple_repeat 1 28 0 6 1065 259 0 23 68 chr17 62971057 62971101 -32301550 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 6 1065 486 0 0 0 chr17 62971452 62971506 -32301145 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 1065 212 290 23 171 chr17 62971521 62971633 -32301018 + PB1D7 SINE Alu 11 110 -10 6 1065 206 32 32 0 chr17 62971633 62971664 -32300987 + (CAA)n Simple_repeat Simple_repeat 2 33 0 6 1065 212 290 23 171 chr17 62971664 62971680 -32300971 + PB1D7 SINE Alu 111 120 0 6 1065 218 273 46 83 chr17 62972001 62972109 -32300542 + PB1D7 SINE Alu 14 120 0 6 1065 396 100 25 12 chr17 62974303 62974384 -32298267 + (TG)n Simple_repeat Simple_repeat 2 83 0 6 1065 23 33 0 0 chr17 62975569 62975599 -32297052 + AT_rich Low_complexity Low_complexity 1 30 0 6 1065 361 333 99 33 chr17 62976683 62976894 -32295757 - MIRb SINE MIR -8 260 36 6 1065 369 329 43 55 chr17 62977264 62977428 -32295223 + RSINE1 SINE B4 4 165 0 6 1065 22 35 0 0 chr17 62977458 62977487 -32295164 + AT_rich Low_complexity Low_complexity 1 29 0 6 1065 201 147 0 0 chr17 62978480 62978514 -32294137 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 1065 3173 72 12 2 chr17 62978556 62978972 -32293679 - BGLII LTR ERVK -1 420 1 6 1065 609 110 0 0 chr17 62979242 62979333 -32293318 + (TA)n Simple_repeat Simple_repeat 1 91 0 6 1065 3236 279 97 25 chr17 62979710 62979782 -32292869 + Lx8 LINE L1 6088 6167 -1306 7 1065 482 0 17 0 chr17 62979782 62979840 -32292811 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 1065 3236 279 97 25 chr17 62979840 62980788 -32291863 + Lx8 LINE L1 6168 7164 -309 7 1065 1140 42 21 0 chr17 62980788 62980932 -32291719 - B1_Mus2 SINE Alu 0 147 1 7 1065 3236 279 97 25 chr17 62980932 62981194 -32291457 + Lx8 LINE L1 7165 7462 -11 7 1065 706 304 0 10 chr17 62981276 62981485 -32291166 + B4 SINE B4 67 273 -19 7 1065 264 68 0 63 chr17 62984282 62984320 -32288331 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 7 1065 189 0 0 0 chr17 62984320 62984341 -32288310 + (CCA)n Simple_repeat Simple_repeat 1 21 0 7 1065 264 68 0 63 chr17 62984341 62984365 -32288286 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 7 1065 759 228 0 0 chr17 62986631 62986811 -32285840 + (TA)n Simple_repeat Simple_repeat 1 180 0 7 1065 201 271 0 0 chr17 62986814 62986862 -32285789 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 7 1065 405 0 0 0 chr17 62987841 62987886 -32284765 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 1065 799 209 0 13 chr17 62988423 62988573 -32284078 - B1F2 SINE Alu 0 149 2 7 1065 21 0 0 0 chr17 62988802 62988823 -32283828 + AT_rich Low_complexity Low_complexity 1 21 0 7 1065 639 276 85 20 chr17 62988938 62989186 -32283465 - B4A SINE B4 -28 264 1 7 1065 1211 41 0 0 chr17 62989637 62989783 -32282868 + B1_Mus2 SINE Alu 2 147 0 7 1065 243 0 0 0 chr17 62989814 62989841 -32282810 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1065 324 197 0 0 chr17 62989939 62990000 -32282651 + ID2 SINE ID 1 61 -22 7 1065 242 278 14 0 chr17 62990000 62990011 -32282640 + B4 SINE B4 1 73 -219 7 1065 189 307 2 15 chr17 62993827 62993912 -32278739 - MIRc SINE MIR -107 169 86 7 1065 939 186 126 0 chr17 62993939 62994122 -32278529 + B3 SINE B2 2 207 -9 7 1065 718 141 76 30 chr17 62994122 62994254 -32278397 + B1_Mur4 SINE Alu 12 149 -1 7 1065 276 92 45 15 chr17 62994254 62994320 -32278331 + (CAAA)n Simple_repeat Simple_repeat 1 68 0 7 1065 362 319 14 22 chr17 62995382 62995520 -32277131 - B4 SINE B4 -154 138 2 7 1065 364 200 19 0 chr17 62995697 62995802 -32276849 + (CA)n Simple_repeat Simple_repeat 2 108 0 7 1065 255 373 8 0 chr17 62996558 62996676 -32275975 - MIR3 SINE MIR -15 193 75 7 1065 306 0 0 0 chr17 62998668 62998702 -32273949 + (GA)n Simple_repeat Simple_repeat 2 35 0 7 1065 297 0 0 0 chr17 62999036 62999069 -32273582 + (A)n Simple_repeat Simple_repeat 1 33 0 7 1065 448 300 31 18 chr17 62999281 62999444 -32273207 + MER5A1 DNA MER1_type 1 165 -1 7 1065 375 78 0 0 chr17 63000641 63000692 -32271959 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1065 270 0 0 0 chr17 63000874 63000904 -32271747 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1065 821 302 90 19 chr17 63001017 63001382 -32271269 - L3 LINE CR1 -101 4388 3998 3 1065 220 242 15 61 chr17 63001582 63001648 -32271003 + MIRc SINE MIR 119 181 -87 4 1065 360 0 0 0 chr17 63001662 63001702 -32270949 + (GGA)n Simple_repeat Simple_repeat 2 41 0 5 1065 225 94 0 0 chr17 63002272 63002304 -32270347 + (TTA)n Simple_repeat Simple_repeat 2 33 0 6 1065 432 283 0 8 chr17 63002581 63002702 -32269949 - ID_B1 SINE B4 -6 218 99 7 1065 267 252 65 83 chr17 63002618 63002726 -32269925 - MT2B LTR ERVL -344 257 152 8 1065 247 344 37 22 chr17 63002971 63003105 -32269546 - MIRb SINE MIR -61 207 72 9 1065 1300 51 96 6 chr17 63004369 63004546 -32268105 + B2_Mm2 SINE B2 1 193 -2 1 1065 21 57 0 0 chr17 63004597 63004632 -32268019 + AT_rich Low_complexity Low_complexity 1 35 0 1 1065 441 0 0 0 chr17 63008617 63008666 -32263985 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1065 240 111 0 0 chr17 63008714 63008750 -32263901 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 1065 569 308 123 31 chr17 63009905 63010254 -32262397 + MLT1A LTR MaLR 1 381 -9 1 1065 868 117 80 7 chr17 63012521 63012659 -32259992 + B1_Mur3 SINE Alu 2 149 0 1 1065 43 0 0 0 chr17 63013048 63013091 -32259560 + AT_rich Low_complexity Low_complexity 1 43 0 1 1065 231 146 0 0 chr17 63013530 63013571 -32259080 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1065 1085 128 0 6 chr17 63015623 63015804 -32256847 + (GAA)n Simple_repeat Simple_repeat 1 180 0 1 1065 262 324 55 61 chr17 63016644 63016825 -32255826 + MIR SINE MIR 3 183 -85 1 1065 326 318 18 9 chr17 63017027 63017138 -32255513 + PB1D10 SINE Alu 1 112 -5 2 1065 205 233 0 32 chr17 63017145 63017207 -32255444 + GA-rich Low_complexity Low_complexity 2 61 0 2 1065 226 243 0 119 chr17 63017334 63017418 -32255233 - PB1D10 SINE Alu -10 107 34 2 1065 224 288 17 0 chr17 63017942 63018001 -32254650 - B4A SINE B4 -147 145 86 2 1065 222 91 0 0 chr17 63019184 63019217 -32253434 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1065 272 250 13 0 chr17 63019701 63019777 -32252874 + ID4 SINE ID 3 79 -4 2 1065 883 192 19 0 chr17 63019818 63019979 -32252672 + B3 SINE B2 10 173 -43 2 1065 238 115 19 19 chr17 63020196 63020249 -32252402 + A-rich Low_complexity Low_complexity 1 53 0 2 1065 565 181 42 0 chr17 63020259 63020393 -32252258 + B1_Mur2 SINE Alu 1 149 0 2 1065 295 121 35 0 chr17 63022868 63022926 -32249725 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 1065 591 270 49 0 chr17 63022927 63023090 -32249561 - ID_B1 SINE B4 -51 173 3 3 1065 23 33 0 0 chr17 63023095 63023125 -32249526 + AT_rich Low_complexity Low_complexity 1 30 0 3 1065 914 252 20 0 chr17 63023235 63023437 -32249214 + B3 SINE B2 5 210 -6 3 1065 279 0 0 0 chr17 63027178 63027209 -32245442 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1065 909 220 17 0 chr17 63027210 63027383 -32245268 + B3 SINE B2 1 176 -40 3 1065 280 133 651 17 chr17 63027547 63027663 -32244988 + URR1A DNA MER1_type 37 225 -1 3 1065 200 225 0 0 chr17 63027731 63027771 -32244880 + L4 LINE RTE 1799 1838 -191 3 1065 380 143 0 14 chr17 63028798 63028869 -32243782 + GA-rich Low_complexity Low_complexity 2 71 0 3 1065 311 0 0 25 chr17 63029896 63029936 -32242715 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 3 1065 21 0 0 0 chr17 63030476 63030497 -32242154 + AT_rich Low_complexity Low_complexity 1 21 0 3 1065 552 143 0 0 chr17 63031411 63031523 -32241128 + (CA)n Simple_repeat Simple_repeat 2 113 0 4 1065 591 144 0 19 chr17 63031678 63031784 -32240867 + PB1D9 SINE Alu 17 120 0 4 1065 599 265 0 14 chr17 63031873 63032011 -32240640 + B1_Mur1 SINE Alu 4 139 -10 4 1065 332 200 12 0 chr17 63032276 63032361 -32240290 + GA-rich Low_complexity Low_complexity 2 87 0 4 1065 247 318 11 45 chr17 63032631 63032720 -32239931 + MIR SINE MIR 19 104 -104 4 1065 737 208 249 0 chr17 63032859 63033032 -32239619 - B3 SINE B2 0 216 1 4 1065 1004 215 2 10 chr17 63033039 63033239 -32239412 - B3 SINE B2 -9 186 1 4 1065 37 81 0 0 chr17 63033430 63033516 -32239135 + AT_rich Low_complexity Low_complexity 1 86 0 4 1065 246 32 0 0 chr17 63033708 63033739 -32238912 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1065 213 39 0 0 chr17 63035616 63035642 -32237009 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 1065 848 242 65 62 chr17 63035727 63035987 -32236664 + Lx9 LINE L1 7209 7469 -175 5 1065 195 42 0 0 chr17 63035997 63036021 -32236630 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1065 180 111 0 0 chr17 63036052 63036079 -32236572 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1065 267 173 0 0 chr17 63036082 63036134 -32236517 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1065 240 35 0 0 chr17 63036134 63036163 -32236488 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 1065 212 246 159 0 chr17 63036189 63036258 -32236393 + ID4_ SINE ID 4 83 0 5 1065 348 24 0 0 chr17 63036259 63036300 -32236351 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1065 703 158 0 0 chr17 63036453 63036567 -32236084 + B1_Mus1 SINE Alu 1 114 -34 5 1065 526 170 77 43 chr17 63037862 63037979 -32234672 + B3 SINE B2 3 123 -93 5 1065 408 256 12 0 chr17 63037985 63038071 -32234580 + RSINE1 SINE B4 10 96 -69 5 1065 387 0 0 0 chr17 63038848 63038891 -32233760 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 1065 590 143 0 9 chr17 63039414 63039520 -32233131 + GA-rich Low_complexity Low_complexity 4 108 0 6 1065 206 200 0 0 chr17 63039521 63039556 -32233095 + G-rich Low_complexity Low_complexity 1 35 0 6 1065 792 32 0 0 chr17 63039556 63039651 -32233000 + (GAGAA)n Simple_repeat Simple_repeat 1 95 0 6 1065 335 271 74 25 chr17 63039955 63040076 -32232575 + RSINE1 SINE B4 2 128 -37 6 1065 360 0 0 0 chr17 63040090 63040130 -32232521 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1065 291 28 0 0 chr17 63041009 63041045 -32231606 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 1065 483 69 0 0 chr17 63041045 63041117 -32231534 + (GA)n Simple_repeat Simple_repeat 1 72 0 6 1065 432 152 0 0 chr17 63041119 63041218 -32231433 + (CA)n Simple_repeat Simple_repeat 1 99 0 6 1065 348 135 0 0 chr17 63042183 63042257 -32230394 + (TC)n Simple_repeat Simple_repeat 1 74 0 6 1065 1226 96 22 11 chr17 63043267 63043447 -32229204 + B2_Mm2 SINE B2 5 186 -9 7 1065 216 270 181 48 chr17 63043789 63043894 -32228757 - PB1D7 SINE Alu -1 119 1 7 133 1624 190 114 19 chr17 63045277 63045653 -32226998 + MTC LTR MaLR 2 413 -8 7 1066 418 266 45 9 chr17 63045926 63046036 -32226615 - PB1D9 SINE Alu -6 114 1 7 1066 1044 269 21 21 chr17 63049015 63049300 -32223351 + B4 SINE B4 8 292 0 7 1066 822 208 61 25 chr17 63049744 63049941 -32222710 + B3 SINE B2 2 205 -11 7 1066 345 24 0 0 chr17 63050634 63050676 -32221975 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1066 254 95 24 0 chr17 63051087 63051129 -32221522 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 7 1066 250 87 21 21 chr17 63053012 63053059 -32219592 + (TTA)n Simple_repeat Simple_repeat 1 47 0 7 1066 324 0 0 0 chr17 63053531 63053567 -32219084 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 1066 620 244 40 6 chr17 63054443 63054616 -32218035 - B3A SINE B2 -18 180 2 8 1066 197 183 17 0 chr17 63055692 63055752 -32216899 + A-rich Low_complexity Low_complexity 3 63 0 8 1066 596 209 17 6 chr17 63056425 63056598 -32216053 + GA-rich Low_complexity Low_complexity 1 175 0 8 1066 902 78 8 0 chr17 63056599 63056727 -32215924 + (GAAA)n Simple_repeat Simple_repeat 4 132 0 8 1066 441 0 0 0 chr17 63057228 63057277 -32215374 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 1066 23 0 0 0 chr17 63059581 63059604 -32213047 + AT_rich Low_complexity Low_complexity 1 23 0 8 1066 23 33 0 0 chr17 63059672 63059702 -32212949 + AT_rich Low_complexity Low_complexity 1 30 0 8 1066 280 143 81 10 chr17 63059702 63059801 -32212850 + (TA)n Simple_repeat Simple_repeat 1 106 0 8 1066 222 195 0 0 chr17 63060011 63060052 -32212599 + GA-rich Low_complexity Low_complexity 2 42 0 8 1066 561 314 86 37 chr17 63060415 63060660 -32211991 + MER70A LTR ERVL 206 462 -10 8 1066 203 133 0 0 chr17 63061024 63061054 -32211597 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 9 1066 405 0 0 0 chr17 63061736 63061781 -32210870 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 1066 602 282 6 51 chr17 63061787 63061944 -32210707 - RSINE1 SINE B4 -13 152 3 9 1066 210 143 0 0 chr17 63061976 63062011 -32210640 + (CA)n Simple_repeat Simple_repeat 2 36 0 9 1066 213 121 0 0 chr17 63062028 63062061 -32210590 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 1066 716 32 11 0 chr17 63062073 63062168 -32210483 + (GGAA)n Simple_repeat Simple_repeat 3 98 0 9 1066 216 130 54 36 chr17 63062168 63062224 -32210427 + (CAGG)n Simple_repeat Simple_repeat 1 57 0 9 1066 2010 101 9 31 chr17 63063443 63063769 -32208882 - ORR1A2 LTR MaLR -8 319 1 9 1066 860 267 56 48 chr17 63065409 63065767 -32206884 - MER45B DNA Tip100 -74 966 606 9 1066 200 308 0 0 chr17 63066420 63066472 -32206179 + (CG)n Simple_repeat Simple_repeat 1 52 0 9 1066 606 63 0 0 chr17 63066472 63066551 -32206100 + (CA)n Simple_repeat Simple_repeat 1 79 0 1 1066 657 201 35 21 chr17 63069112 63069254 -32203397 + B1_Mus2 SINE Alu 1 144 -3 1 1066 237 354 0 0 chr17 63069469 63069551 -32203100 + ID2 SINE ID 2 83 0 1 1066 207 88 0 0 chr17 63069699 63069733 -32202918 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 1066 347 0 0 0 chr17 63071283 63071330 -32201321 + L1Md_T LINE L1 6536 6582 0 1 1066 524 305 40 33 chr17 63071447 63071822 -32200829 + L1MA4 LINE L1 5622 6010 -281 1 1066 397 266 15 23 chr17 63072598 63072729 -32199922 + RSINE1 SINE B4 3 132 -33 1 1066 234 0 0 0 chr17 63072817 63072843 -32199808 + (CTA)n Simple_repeat Simple_repeat 1 26 0 1 1066 362 148 0 146 chr17 63074606 63074709 -32197942 + MT2B LTR ERVL 168 255 -346 1 1066 926 118 0 0 chr17 63074620 63074756 -32197895 + B1_Mur4 SINE Alu 15 150 0 1 1066 357 214 71 8 chr17 63075121 63075248 -32197403 + MER33 DNA MER1_type 79 213 -111 1 1066 225 224 26 13 chr17 63076240 63076317 -32196334 + (TTCA)n Simple_repeat Simple_repeat 3 80 0 1 1066 218 288 24 59 chr17 63076735 63076820 -32195831 + L2a LINE L2 3345 3426 0 1 1066 30 0 0 0 chr17 63077376 63077406 -32195245 + AT_rich Low_complexity Low_complexity 1 30 0 1 1066 540 214 54 20 chr17 63077463 63077611 -32195040 + Lx9 LINE L1 7492 7644 0 1 1066 327 146 0 0 chr17 63080968 63081023 -32191628 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 1 1066 282 116 0 0 chr17 63081031 63081074 -32191577 + (CATA)n Simple_repeat Simple_repeat 2 44 0 1 1066 923 100 0 48 chr17 63081081 63081270 -32191381 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1 1066 446 88 15 0 chr17 63081798 63081866 -32190785 + (GGA)n Simple_repeat Simple_repeat 3 71 0 1 1066 272 346 134 17 chr17 63082021 63082312 -32190339 + L1MB8 LINE L1 5853 6177 -1 1 1066 336 266 34 50 chr17 63082526 63082645 -32190006 + MIR SINE MIR 73 189 -73 1 1066 225 0 0 0 chr17 63083068 63083093 -32189558 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1066 270 56 0 0 chr17 63083428 63083464 -32189187 + (A)n Simple_repeat Simple_repeat 1 36 0 1 1066 450 0 0 0 chr17 63085169 63085219 -32187432 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1066 378 0 0 0 chr17 63086771 63086813 -32185838 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1066 727 178 85 45 chr17 63086823 63086891 -32185760 + MTC LTR MaLR 12 75 -346 1 1066 777 31 0 0 chr17 63086891 63086987 -32185664 + (CCCTAA)n Simple_repeat Simple_repeat 3 98 0 1 1066 727 239 127 85 chr17 63086987 63087280 -32185371 + MTC LTR MaLR 75 389 -7 1 1066 1433 236 52 93 chr17 63087276 63088325 -32184326 + MTD-int LTR MaLR 158 1258 0 1 1066 1837 207 49 0 chr17 63088326 63088713 -32183938 + MTD LTR MaLR 2 407 -12 1 1066 216 0 0 0 chr17 63088850 63088874 -32183777 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1066 279 0 0 0 chr17 63089886 63089917 -32182734 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1066 271 321 15 22 chr17 63089917 63090054 -32182597 + (CATATA)n Simple_repeat Simple_repeat 4 139 0 1 1066 288 77 0 0 chr17 63090162 63090201 -32182450 + (TTG)n Simple_repeat Simple_repeat 2 40 0 1 1066 354 290 79 10 chr17 63090647 63090748 -32181903 + PB1D10 SINE Alu 3 110 -7 1 1066 1129 68 7 20 chr17 63091672 63091822 -32180829 + B1_Mus1 SINE Alu 1 148 0 1 1066 209 128 0 21 chr17 63091828 63091876 -32180775 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 1066 21 0 0 0 chr17 63092151 63092172 -32180479 + AT_rich Low_complexity Low_complexity 1 21 0 1 1066 254 347 0 0 chr17 63092453 63092525 -32180126 + PB1 SINE Alu 37 108 -19 1 1066 238 219 30 45 chr17 63092924 63092991 -32179660 + LTR16D LTR ERVL 299 364 -287 1 1066 456 268 9 35 chr17 63093488 63093604 -32179047 - B3A SINE B2 -83 115 3 1 1066 234 373 54 57 chr17 63093693 63093972 -32178679 - MLT1I LTR MaLR -6 405 128 1 1066 3144 70 2 5 chr17 63094026 63094427 -32178224 - MTB LTR MaLR 0 400 1 1 1066 578 14 14 0 chr17 63094571 63094642 -32178009 + (TAGA)n Simple_repeat Simple_repeat 1 72 0 1 1066 257 352 13 73 chr17 63094744 63094894 -32177757 + MIRb SINE MIR 48 188 -80 1 1066 471 78 0 0 chr17 63099494 63099558 -32173093 + (GAAAA)n Simple_repeat Simple_repeat 2 65 0 1 1066 291 286 9 71 chr17 63100693 63100806 -32171845 + PB1D7 SINE Alu 10 115 -5 1 1066 274 318 0 45 chr17 63100814 63100832 -32171819 + ID_B1 SINE B4 69 175 -49 1 1066 448 223 21 0 chr17 63100832 63100926 -32171725 + B1_Mur2 SINE Alu 2 97 -52 1 1066 237 269 43 29 chr17 63101280 63101349 -32171302 - ID4_ SINE ID -12 71 2 1 1066 291 269 71 36 chr17 63101361 63101473 -32171178 - PB1 SINE Alu -3 124 9 1 1066 1607 214 80 10 chr17 63101620 63102007 -32170644 + MTD LTR MaLR 6 419 0 1 1066 225 268 92 11 chr17 63102012 63102099 -32170552 - MIRc SINE MIR -122 146 53 1 1066 220 271 59 114 chr17 63102160 63102431 -32170220 - L2c LINE L2 -58 3329 3074 1 1066 358 342 38 19 chr17 63103405 63103563 -32169088 + RSINE1 SINE B4 4 164 -1 1 1066 504 263 8 0 chr17 63104801 63104919 -32167732 - ID_B1 SINE B4 -15 209 91 1 1066 931 154 7 0 chr17 63105598 63105741 -32166910 + B1_Mur4 SINE Alu 1 144 -6 1 1066 25 0 0 0 chr17 63106083 63106108 -32166543 + AT_rich Low_complexity Low_complexity 1 25 0 1 1066 189 107 0 0 chr17 63107062 63107090 -32165561 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1066 217 308 0 58 chr17 63108533 63108602 -32164049 - ID4_ SINE ID -10 73 9 1 1066 311 289 32 16 chr17 63108610 63108733 -32163918 - B1F SINE Alu -10 139 15 1 1066 324 0 0 0 chr17 63110492 63110528 -32162123 + (A)n Simple_repeat Simple_repeat 1 36 0 1 1066 1191 56 0 0 chr17 63111301 63111444 -32161207 - B1_Mus2 SINE Alu 0 147 5 1 1066 364 266 35 17 chr17 63111810 63111925 -32160726 + B1F1 SINE Alu 28 144 -5 1 1066 459 250 141 14 chr17 63112579 63112721 -32159930 - RSINE1 SINE B4 -4 161 2 1 1066 369 0 0 0 chr17 63114852 63114893 -32157758 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 1 1066 31 0 0 0 chr17 63116766 63116797 -32155854 + AT_rich Low_complexity Low_complexity 1 31 0 1 1066 409 263 10 10 chr17 63117596 63117696 -32154955 - ID_B1 SINE B4 -25 199 100 1 1066 209 388 22 0 chr17 63117911 63118045 -32154606 + L2b LINE L2 3233 3369 -6 1 1066 191 314 86 0 chr17 63118943 63119048 -32153603 + MIR SINE MIR 149 262 0 1 1066 429 97 0 0 chr17 63120251 63120323 -32152328 + (A)n Simple_repeat Simple_repeat 1 72 0 1 1066 207 114 0 0 chr17 63120880 63120915 -32151736 + (A)n Simple_repeat Simple_repeat 1 35 0 1 1066 22 0 0 0 chr17 63121303 63121325 -32151326 + AT_rich Low_complexity Low_complexity 1 22 0 1 1066 906 257 115 37 chr17 63121454 63121802 -32150849 - MTEb LTR MaLR -4 375 1 1 1066 233 233 66 26 chr17 63122020 63122120 -32150531 + MIR SINE MIR 50 151 -111 1 1066 22 0 0 0 chr17 63122727 63122749 -32149902 + AT_rich Low_complexity Low_complexity 1 22 0 1 1066 250 257 14 28 chr17 63122749 63122821 -32149830 + L4 LINE RTE 1764 1834 -195 1 1066 629 155 82 44 chr17 63123621 63123756 -32148895 - B1_Mus2 SINE Alu 0 147 8 1 1066 1663 243 24 17 chr17 63124720 63125138 -32147513 - MTC LTR MaLR 0 421 1 1 1066 665 144 8 0 chr17 63127041 63127159 -32145492 + (TAGA)n Simple_repeat Simple_repeat 1 119 0 1 1066 216 0 0 0 chr17 63127975 63127999 -32144652 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1066 195 69 0 0 chr17 63128047 63128076 -32144575 + (G)n Simple_repeat Simple_repeat 1 29 0 1 1066 750 179 9 12 chr17 63129202 63129536 -32143115 + (TG)n Simple_repeat Simple_repeat 1 332 0 1 1066 420 20 0 0 chr17 63130275 63130324 -32142327 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 1066 227 265 0 0 chr17 63130747 63130796 -32141855 + CT-rich Low_complexity Low_complexity 5 53 0 1 1066 189 0 0 0 chr17 63130834 63130855 -32141796 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1066 771 38 0 9 chr17 63130855 63130962 -32141689 - B1_Mus2 SINE Alu 0 147 42 1 1066 271 139 111 65 chr17 63130898 63131006 -32141645 - RLTR25B LTR ERVK -519 509 397 1 1066 289 91 0 43 chr17 63131026 63131072 -32141579 - PB1D9 SINE Alu -61 59 16 1 1066 22 35 0 0 chr17 63131208 63131237 -32141414 + AT_rich Low_complexity Low_complexity 1 29 0 1 1066 333 0 0 0 chr17 63135539 63135576 -32137075 + (GA)n Simple_repeat Simple_repeat 1 37 0 1 1066 228 35 0 0 chr17 63137344 63137373 -32135278 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1066 207 167 0 0 chr17 63138004 63138040 -32134611 + C-rich Low_complexity Low_complexity 1 36 0 1 1066 225 94 0 0 chr17 63139600 63139632 -32133019 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 1 1066 363 127 0 0 chr17 63139984 63140047 -32132604 + (TA)n Simple_repeat Simple_repeat 1 63 0 1 1066 223 167 0 0 chr17 63140083 63140125 -32132526 + GA-rich Low_complexity Low_complexity 1 42 0 1 1066 495 112 0 0 chr17 63140125 63140205 -32132446 + (TG)n Simple_repeat Simple_repeat 2 81 0 1 1066 449 76 15 0 chr17 63141498 63141564 -32131087 + (GA)n Simple_repeat Simple_repeat 2 68 0 1 1066 309 51 0 0 chr17 63141702 63141741 -32130910 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1066 699 46 0 0 chr17 63143451 63143538 -32129113 + (TG)n Simple_repeat Simple_repeat 2 88 0 1 1066 1404 94 5 0 chr17 63144314 63144505 -32128146 + B2_Mm1a SINE B2 2 193 0 1 1066 821 68 246 0 chr17 63147014 63147132 -32125519 + B1_Mus1 SINE Alu 2 148 0 1 1066 252 0 0 0 chr17 63147952 63147980 -32124671 + (CCTG)n Simple_repeat Simple_repeat 2 29 0 2 1066 296 150 12 0 chr17 63148035 63148115 -32124536 + T-rich Low_complexity Low_complexity 2 82 0 2 1066 694 249 115 11 chr17 63148587 63148778 -32123873 - B3 SINE B2 -5 211 1 2 1066 410 53 18 0 chr17 63149721 63149778 -32122873 + (TC)n Simple_repeat Simple_repeat 1 58 0 2 1066 195 114 0 0 chr17 63149909 63149944 -32122707 + (TTTG)n Simple_repeat Simple_repeat 4 38 0 2 1066 223 49 24 24 chr17 63151124 63151166 -32121485 + (CAAAAA)n Simple_repeat Simple_repeat 3 44 0 2 1066 1095 44 0 7 chr17 63151769 63151906 -32120745 + B1_Mm SINE Alu 1 136 -11 2 1066 486 0 0 0 chr17 63151906 63151960 -32120691 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 2 1066 378 0 0 0 chr17 63152553 63152595 -32120056 + (A)n Simple_repeat Simple_repeat 1 42 0 2 1066 448 289 24 42 chr17 63153363 63153529 -32119122 - RSINE1 SINE B4 0 165 3 2 1066 873 166 20 7 chr17 63153812 63153958 -32118693 + B1_Mus1 SINE Alu 1 148 0 2 1066 321 47 0 0 chr17 63153972 63154015 -32118636 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2 1066 1197 68 0 0 chr17 63154092 63154239 -32118412 + B1_Mus1 SINE Alu 2 148 0 2 1066 201 108 0 0 chr17 63154239 63154276 -32118375 + (A)n Simple_repeat Simple_repeat 1 37 0 2 1066 225 262 130 58 chr17 63155148 63155286 -32117365 + MER5B DNA MER1_type 5 152 -26 2 1066 1141 70 73 34 chr17 63155625 63155802 -32116849 - B2_Mm2 SINE B2 -11 184 1 2 1066 21 36 0 0 chr17 63156895 63156923 -32115728 + AT_rich Low_complexity Low_complexity 1 28 0 2 1066 1269 34 0 0 chr17 63157591 63157738 -32114913 - B1_Mus1 SINE Alu 0 148 2 2 1066 668 170 302 24 chr17 63157769 63157938 -32114713 - B3 SINE B2 0 216 1 2 1066 263 28 28 0 chr17 63158241 63158277 -32114374 + (TTG)n Simple_repeat Simple_repeat 3 39 0 2 1066 1144 57 13 0 chr17 63158397 63158555 -32114096 + B2_Mm2 SINE B2 2 161 -34 2 1066 297 0 0 0 chr17 63158555 63158588 -32114063 + (TTAA)n Simple_repeat Simple_repeat 4 36 0 2 1066 23 54 0 0 chr17 63158873 63158910 -32113741 + AT_rich Low_complexity Low_complexity 1 37 0 2 1066 388 302 42 30 chr17 63159222 63159389 -32113262 + MIRb SINE MIR 72 240 -28 2 1066 180 0 0 0 chr17 63159873 63159893 -32112758 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 1066 641 262 15 23 chr17 63160739 63160901 -32111750 + ID_B1 SINE B4 84 246 -46 2 1066 444 118 0 0 chr17 63160901 63160969 -32111682 + (GGGA)n Simple_repeat Simple_repeat 3 70 0 2 1066 24 0 0 0 chr17 63161462 63161486 -32111165 + AT_rich Low_complexity Low_complexity 1 24 0 2 1066 327 49 0 0 chr17 63162022 63162063 -32110588 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1066 25 51 0 0 chr17 63162360 63162399 -32110252 + AT_rich Low_complexity Low_complexity 1 39 0 2 1066 694 300 12 28 chr17 63162875 63163129 -32109522 + CR1_Mam LINE CR1 1554 1803 -401 2 1066 1787 202 120 14 chr17 63163315 63163791 -32108860 + Lx9 LINE L1 6948 7476 -168 2 1066 309 51 0 0 chr17 63163791 63163830 -32108821 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1066 1787 203 96 42 chr17 63163830 63163943 -32108708 + Lx9 LINE L1 7477 7641 -3 2 1066 336 24 0 0 chr17 63164456 63164497 -32108154 + (A)n Simple_repeat Simple_repeat 1 41 0 2 1066 405 256 0 0 chr17 63164624 63164710 -32107941 + PB1D10 SINE Alu 24 109 -8 2 1066 222 286 0 0 chr17 63169291 63169389 -32103262 + (CA)n Simple_repeat Simple_repeat 1 98 0 2 1066 239 337 23 0 chr17 63169435 63169521 -32103130 + MIRb SINE MIR 85 172 -96 2 1066 267 175 0 0 chr17 63172083 63172140 -32100511 + C-rich Low_complexity Low_complexity 5 61 0 2 1066 204 125 0 0 chr17 63173147 63173179 -32099472 + (A)n Simple_repeat Simple_repeat 1 32 0 2 1066 348 24 0 0 chr17 63173423 63173464 -32099187 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2 1066 219 69 0 0 chr17 63173950 63173979 -32098672 + (CAAT)n Simple_repeat Simple_repeat 3 31 0 2 1066 1416 147 18 0 chr17 63174265 63174483 -32098168 + URR1B DNA MER1_type 1 222 -3 2 1066 486 75 0 0 chr17 63175405 63175472 -32097179 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 2 1066 183 80 0 0 chr17 63176042 63176067 -32096584 + (ATG)n Simple_repeat Simple_repeat 3 27 0 2 1066 204 200 0 0 chr17 63176619 63176654 -32095997 + polypurine Low_complexity Low_complexity 2 36 0 2 1067 25 0 0 0 chr17 63177257 63177282 -32095369 + AT_rich Low_complexity Low_complexity 1 25 0 2 1067 194 62 31 0 chr17 63177999 63178031 -32094620 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2 1067 180 111 0 0 chr17 63178331 63178358 -32094293 + (G)n Simple_repeat Simple_repeat 1 27 0 2 1067 351 47 0 0 chr17 63179558 63179601 -32093050 - HAL1-3A_ME LINE L1 -840 2018 1976 2 1067 525 168 0 0 chr17 63180173 63180280 -32092371 + (CA)n Simple_repeat Simple_repeat 2 108 0 2 1067 606 14 0 0 chr17 63180285 63180356 -32092295 + (TC)n Simple_repeat Simple_repeat 2 72 0 2 1067 23 33 0 0 chr17 63180800 63180830 -32091821 + AT_rich Low_complexity Low_complexity 1 30 0 2 1067 387 0 0 0 chr17 63181526 63181569 -32091082 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1067 183 80 0 0 chr17 63181947 63181972 -32090679 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1067 21 0 0 0 chr17 63182743 63182764 -32089887 + AT_rich Low_complexity Low_complexity 1 21 0 2 1067 414 0 0 0 chr17 63184098 63184144 -32088507 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1067 710 297 20 0 chr17 63184154 63184302 -32088349 - B3A SINE B2 -47 151 1 2 1067 1174 107 0 0 chr17 63184378 63184537 -32088114 + B2_Mm2 SINE B2 1 159 -36 2 1067 315 0 0 0 chr17 63184537 63184572 -32088079 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 2 1067 284 325 12 38 chr17 63185033 63185113 -32087538 - PB1D10 SINE Alu -18 99 22 2 1067 23 0 0 0 chr17 63185170 63185193 -32087458 + AT_rich Low_complexity Low_complexity 1 23 0 2 1067 622 244 0 22 chr17 63185196 63185330 -32087321 + RSINE1 SINE B4 4 134 -31 2 1067 189 0 0 0 chr17 63185339 63185360 -32087291 + (TTAA)n Simple_repeat Simple_repeat 1 21 0 2 1067 23 68 0 0 chr17 63187591 63187635 -32085016 + AT_rich Low_complexity Low_complexity 1 44 0 2 1067 285 370 0 14 chr17 63187645 63187719 -32084932 - RSINE1 SINE B4 -2 163 91 2 1067 274 122 58 58 chr17 63187773 63187860 -32084791 + T-rich Low_complexity Low_complexity 4 90 0 2 1067 1341 153 30 0 chr17 63188025 63188228 -32084423 + B3 SINE B2 1 209 -7 2 1067 433 199 76 0 chr17 63189779 63189794 -32082857 + Lx9 LINE L1 7498 7512 -132 2 1067 240 35 0 0 chr17 63189794 63189823 -32082828 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1067 433 199 76 0 chr17 63189823 63189938 -32082713 + Lx9 LINE L1 7513 7637 -7 2 1067 181 321 51 13 chr17 63190442 63190521 -32082130 - MIRc SINE MIR -117 151 70 2 1067 412 219 193 21 chr17 63191609 63191749 -32080902 + L1MC1 LINE L1 6156 6319 -14 2 1067 255 125 0 0 chr17 63192883 63192923 -32079728 + (T)n Simple_repeat Simple_repeat 1 40 0 2 1067 453 189 0 0 chr17 63193003 63193093 -32079558 + GA-rich Low_complexity Low_complexity 3 92 0 2 1067 183 42 0 0 chr17 63193590 63193614 -32079037 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1067 228 67 0 0 chr17 63195351 63195381 -32077270 + (T)n Simple_repeat Simple_repeat 1 30 0 2 1067 474 247 90 6 chr17 63198104 63198271 -32074380 + L1MA8 LINE L1 6111 6291 0 2 1067 24 0 0 0 chr17 63198361 63198385 -32074266 + AT_rich Low_complexity Low_complexity 1 24 0 2 1067 216 97 0 0 chr17 63198504 63198535 -32074116 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1067 198 326 169 8 chr17 63198687 63198817 -32073834 + MIRb SINE MIR 4 154 -114 2 1067 23 0 0 0 chr17 63199294 63199317 -32073334 + AT_rich Low_complexity Low_complexity 1 23 0 2 1067 543 16 0 0 chr17 63200242 63200306 -32072345 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 1067 258 32 0 0 chr17 63201148 63201179 -32071472 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1067 267 103 0 0 chr17 63201857 63201896 -32070755 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1067 1686 104 56 34 chr17 63204791 63205059 -32067592 + L1_Mus3 LINE L1 6363 6636 -2 2 1067 898 168 21 14 chr17 63205122 63205267 -32067384 + B1_Mus2 SINE Alu 2 147 0 2 1067 513 198 0 0 chr17 63205271 63205377 -32067274 + GA-rich Low_complexity Low_complexity 3 108 0 2 1067 21 0 0 0 chr17 63205453 63205474 -32067177 + AT_rich Low_complexity Low_complexity 1 21 0 2 1067 501 17 0 0 chr17 63205836 63205894 -32066757 + (TGG)n Simple_repeat Simple_repeat 2 59 0 2 1067 23 0 0 0 chr17 63206108 63206131 -32066520 + AT_rich Low_complexity Low_complexity 1 23 0 2 1067 337 29 27 68 chr17 63207603 63207677 -32064974 + (TTTG)n Simple_repeat Simple_repeat 2 72 0 2 1067 350 296 43 0 chr17 63208069 63208184 -32064467 - MIRc SINE MIR -125 143 24 2 1067 249 143 42 28 chr17 63209475 63209547 -32063104 - Lx9 LINE L1 -4 7640 7568 2 1067 339 312 33 38 chr17 63210069 63210252 -32062399 + MIRb SINE MIR 76 257 -11 2 1067 248 196 20 0 chr17 63210864 63210915 -32061736 + L1MC1 LINE L1 6264 6315 -18 2 1067 197 324 56 62 chr17 63211086 63211247 -32061404 + L2c LINE L2 3030 3189 -198 2 1067 870 216 49 59 chr17 63213024 63213348 -32059303 + RLTR15 LTR ERVK 3 323 -36 2 1067 1156 62 0 33 chr17 63213537 63213688 -32058963 + B1_Mm SINE Alu 1 146 -1 2 1067 784 219 43 19 chr17 63214415 63214625 -32058026 + B3 SINE B2 2 216 0 2 1067 23 0 0 0 chr17 63215710 63215733 -32056918 + AT_rich Low_complexity Low_complexity 1 23 0 2 1067 565 192 9 19 chr17 63215879 63215985 -32056666 - PB1D10 SINE Alu -8 109 5 2 1067 1080 196 9 18 chr17 63216342 63216560 -32056091 - B3 SINE B2 0 216 1 3 1067 466 273 0 130 chr17 63217385 63217414 -32055237 + ID_B1 SINE B4 70 223 -1 3 1067 734 149 0 95 chr17 63217414 63217562 -32055089 + B1_Mur1 SINE Alu 14 147 -2 3 1067 198 0 0 0 chr17 63218195 63218217 -32054434 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 3 1067 329 307 0 30 chr17 63218703 63218834 -32053817 + MER5A1 DNA MER1_type 39 165 -1 3 1067 303 308 75 0 chr17 63218835 63218942 -32053709 + L2a LINE L2 3307 3421 -5 3 1067 303 28 0 0 chr17 63219495 63219531 -32053120 + (A)n Simple_repeat Simple_repeat 1 36 0 3 1067 216 0 0 0 chr17 63219986 63220010 -32052641 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1067 33 0 0 0 chr17 63221043 63221076 -32051575 + AT_rich Low_complexity Low_complexity 1 33 0 3 1067 360 0 0 0 chr17 63222614 63222654 -32049997 + (GGA)n Simple_repeat Simple_repeat 3 42 0 3 1067 21 0 0 0 chr17 63223709 63223730 -32048921 + AT_rich Low_complexity Low_complexity 1 21 0 3 1067 561 15 0 0 chr17 63225069 63225135 -32047516 + (TC)n Simple_repeat Simple_repeat 1 66 0 3 1067 22 0 0 0 chr17 63226455 63226477 -32046174 + AT_rich Low_complexity Low_complexity 1 22 0 3 1067 21 0 0 0 chr17 63227542 63227563 -32045088 + AT_rich Low_complexity Low_complexity 1 21 0 3 1067 26 0 0 0 chr17 63229869 63229895 -32042756 + AT_rich Low_complexity Low_complexity 1 26 0 3 1067 212 301 8 47 chr17 63230537 63230666 -32041985 + GA-rich Low_complexity Low_complexity 6 129 0 3 1067 233 250 0 68 chr17 63230757 63230890 -32041761 + G-rich Low_complexity Low_complexity 6 129 0 3 1067 183 156 0 0 chr17 63232068 63232100 -32040551 + A-rich Low_complexity Low_complexity 1 32 0 3 1067 209 204 23 0 chr17 63232546 63232590 -32040061 + C-rich Low_complexity Low_complexity 3 47 0 3 1067 243 0 0 0 chr17 63232716 63232743 -32039908 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1067 243 0 0 0 chr17 63234131 63234158 -32038493 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1067 324 70 0 0 chr17 63235182 63235225 -32037426 + (ATTG)n Simple_repeat Simple_repeat 2 44 0 3 1067 294 159 0 0 chr17 63235227 63235296 -32037355 + T-rich Low_complexity Low_complexity 3 71 0 3 1067 200 269 38 25 chr17 63235389 63235469 -32037182 - MER5B DNA MER1_type -97 81 1 3 1067 276 154 0 0 chr17 63236586 63236638 -32036013 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1067 277 270 81 0 chr17 63238928 63239002 -32033649 + ID4_ SINE ID 4 83 0 3 1067 323 235 0 29 chr17 63239084 63239154 -32033497 + ID2 SINE ID 5 72 -11 3 1067 291 282 52 83 chr17 63239498 63239691 -32032960 + MLT1H LTR MaLR 351 537 -12 3 1067 1428 222 48 28 chr17 63241785 63242137 -32030514 + ORR1D1 LTR MaLR 3 361 -13 3 1067 339 25 0 0 chr17 63243768 63243808 -32028843 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 1067 432 0 0 0 chr17 63243948 63243996 -32028655 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1067 326 276 10 20 chr17 63244131 63244231 -32028420 - ORR1D2 LTR MaLR -266 104 6 3 1067 24 53 0 0 chr17 63244336 63244374 -32028277 + AT_rich Low_complexity Low_complexity 1 38 0 3 1067 424 192 6 6 chr17 63244478 63244640 -32028011 + GA-rich Low_complexity Low_complexity 1 162 0 3 1067 1343 270 93 77 chr17 63246163 63246669 -32025982 + Lx8 LINE L1 6812 7332 -141 3 1067 392 0 0 20 chr17 63246669 63246718 -32025933 + (TAA)n Simple_repeat Simple_repeat 2 49 0 3 1067 2125 85 20 67 chr17 63246718 63247059 -32025592 + ORR1A3 LTR MaLR 2 326 0 3 1067 1343 269 95 78 chr17 63247059 63247166 -32025485 + Lx8 LINE L1 7333 7442 -31 3 1067 1068 97 0 0 chr17 63248754 63248909 -32023742 + (TTTC)n Simple_repeat Simple_repeat 2 156 0 3 1067 8266 57 1 0 chr17 63248941 63250138 -32022513 - L1_Mus1 LINE L1 -2 6565 5368 3 1067 449 290 50 22 chr17 63251147 63251327 -32021324 - MER20 DNA MER1_type -1 218 34 3 1067 367 312 53 60 chr17 63252190 63252456 -32020195 + L1MC2 LINE L1 6055 6318 -26 3 1067 1110 141 19 14 chr17 63252612 63252821 -32019830 - Lx2A1 LINE L1 0 7008 6799 3 1067 1248 92 17 11 chr17 63252823 63252999 -32019652 + Lx2 LINE L1 6647 6823 -174 3 1067 1195 130 9 37 chr17 63253540 63253756 -32018895 - URR1B DNA MER1_type -15 210 1 3 1067 3270 55 2 0 chr17 63256967 63257366 -32015285 - MTB LTR MaLR 0 400 1 3 1067 435 19 0 0 chr17 63258001 63258053 -32014598 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1067 237 246 18 0 chr17 63258432 63258489 -32014162 - B4A SINE B4 -232 60 3 3 1067 1197 48 0 7 chr17 63258840 63258987 -32013664 + B1_Mus1 SINE Alu 3 148 0 3 1067 1022 276 90 58 chr17 63260310 63260832 -32011819 + L1MD2 LINE L1 5821 6358 -1 3 1067 295 347 57 17 chr17 63260886 63261062 -32011589 + Tigger15a DNA TcMar 68 250 -465 3 1067 292 276 106 31 chr17 63261596 63261850 -32010801 + L1ME3B LINE L1 5713 5985 -255 3 1067 1579 169 145 6 chr17 63261927 63262272 -32010379 - MTD LTR MaLR -14 405 13 3 1067 874 322 101 70 chr17 63262693 63263484 -32009167 + L1MC2 LINE L1 6 821 -5687 3 1067 424 295 53 24 chr17 63263805 63263975 -32008676 - L1MCa LINE L1 -5874 634 460 3 1067 278 290 148 15 chr17 63264367 63264570 -32008081 + L1MC2 LINE L1 2764 2993 -3328 3 1067 1337 275 92 36 chr17 63264682 63265494 -32007157 + L1MC2 LINE L1 3255 4124 -2197 3 1067 279 0 0 0 chr17 63265494 63265525 -32007126 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 3 1067 1087 52 0 36 chr17 63265525 63265664 -32006987 - B1_Mus2 SINE Alu -13 134 1 3 1067 1337 275 92 36 chr17 63265664 63265758 -32006893 + L1MC2 LINE L1 4125 4212 -2109 3 1067 1762 190 11 65 chr17 63265753 63266125 -32006526 - Lx9 LINE L1 -385 7259 6908 3 1067 933 204 185 27 chr17 63266119 63266231 -32006420 + Lx9 LINE L1 7298 7431 -213 3 1067 261 0 0 0 chr17 63266231 63266260 -32006391 + (CATA)n Simple_repeat Simple_repeat 3 31 0 3 1067 933 204 185 27 chr17 63266260 63266310 -32006341 + Lx9 LINE L1 7432 7498 -146 3 1067 183 80 0 0 chr17 63266310 63266335 -32006316 + (CATA)n Simple_repeat Simple_repeat 4 28 0 3 1067 933 204 185 27 chr17 63266335 63266461 -32006190 + Lx9 LINE L1 7499 7634 -10 3 1067 183 80 0 0 chr17 63266461 63266486 -32006165 + (TA)n Simple_repeat Simple_repeat 1 25 0 3 1067 3163 267 78 35 chr17 63266495 63267411 -32005240 + L1MC2 LINE L1 4212 5151 -1170 3 1067 324 0 0 0 chr17 63267411 63267447 -32005204 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1067 3163 267 78 35 chr17 63267447 63267742 -32004909 + L1MC2 LINE L1 5152 5474 -847 3 1067 261 203 0 115 chr17 63267759 63267837 -32004814 + ID4 SINE ID 15 83 0 3 1067 2047 247 78 74 chr17 63267856 63268088 -32004563 + L1MC2 LINE L1 5462 5701 -818 3 1067 767 237 16 21 chr17 63268088 63268278 -32004373 + B3A SINE B2 4 192 -6 3 1067 2047 247 78 74 chr17 63268278 63268584 -32004067 + L1MC2 LINE L1 5702 6003 -516 3 1067 1152 82 0 0 chr17 63268584 63268730 -32003921 + B1_Mus2 SINE Alu 2 147 0 3 1067 2047 247 78 74 chr17 63268730 63268943 -32003708 + L1MC2 LINE L1 6004 6217 -302 3 1067 230 264 32 42 chr17 63268945 63269040 -32003611 - MLT1A1 LTR MaLR -8 400 307 3 1067 668 328 25 0 chr17 63269374 63269615 -32003036 + L1MC2 LINE L1 6234 6480 -28 3 1067 2108 155 33 56 chr17 63269623 63269988 -32002663 - MTC LTR MaLR -1 420 50 3 1067 1298 88 22 5 chr17 63269988 63270172 -32002479 - B2_Mm2 SINE B2 -7 188 2 3 1067 2108 155 33 56 chr17 63270172 63270236 -32002415 - MTC LTR MaLR -372 49 1 3 1067 25 75 0 0 chr17 63270274 63270327 -32002324 + AT_rich Low_complexity Low_complexity 1 53 0 3 1067 398 245 10 1 chr17 63270420 63270520 -32002131 - B1F SINE Alu -9 140 35 3 1067 833 151 254 6 chr17 63271387 63271560 -32001091 - B3 SINE B2 0 216 1 3 1067 188 343 30 0 chr17 63272948 63273015 -31999636 - MER5A DNA MER1_type -120 69 1 3 1067 189 326 47 60 chr17 63273029 63273179 -31999472 + MER5B DNA MER1_type 8 155 -23 3 1067 189 282 0 0 chr17 63273201 63273240 -31999411 - MER5B DNA MER1_type -1 177 139 3 1067 290 261 52 33 chr17 63273711 63273864 -31998787 - L1MA4 LINE L1 -373 5927 5737 3 1067 757 259 28 28 chr17 63274223 63274434 -31998217 + B3 SINE B2 1 211 -5 3 1067 25 0 0 0 chr17 63274444 63274469 -31998182 + AT_rich Low_complexity Low_complexity 1 25 0 3 1067 1600 212 27 19 chr17 63274602 63274972 -31997679 - ORR1D1 LTR MaLR 0 374 2 3 1067 1105 70 6 6 chr17 63275177 63275335 -31997316 + B2_Mm1a SINE B2 1 158 -35 3 1067 189 0 0 0 chr17 63275335 63275356 -31997295 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 3 1067 246 212 119 15 chr17 63275444 63275511 -31997140 + Lx8 LINE L1 7304 7377 -96 3 1067 37 23 0 0 chr17 63275598 63275642 -31997009 + AT_rich Low_complexity Low_complexity 1 44 0 3 1067 402 100 0 0 chr17 63276589 63276649 -31996002 + (TTGG)n Simple_repeat Simple_repeat 2 61 0 3 1067 876 145 7 14 chr17 63276653 63276800 -31995851 - B1_Mus2 SINE Alu 0 147 2 3 1067 492 18 0 0 chr17 63277549 63277606 -31995045 + (TTTC)n Simple_repeat Simple_repeat 2 58 0 3 1067 1179 61 14 0 chr17 63277614 63277762 -31994889 - B1_Mur4 SINE Alu 0 150 1 3 1067 711 269 306 19 chr17 63277764 63278217 -31994434 - Lx7 LINE L1 -16 7680 7118 3 1067 685 351 68 22 chr17 63279196 63279650 -31993001 - L3 LINE CR1 -715 3774 3300 3 1067 337 313 57 71 chr17 63279928 63280050 -31992601 - MLT1K LTR MaLR -360 235 112 3 1067 1055 105 136 0 chr17 63280050 63280212 -31992439 + B2_Mm2 SINE B2 2 185 -10 3 1067 337 313 57 71 chr17 63280212 63280230 -31992421 - MLT1K LTR MaLR -484 111 97 3 1067 2116 126 100 8 chr17 63281213 63281574 -31991077 - ORR1B1 LTR MaLR 0 394 1 3 1067 572 80 0 11 chr17 63281829 63281917 -31990734 + (TAGA)n Simple_repeat Simple_repeat 3 89 0 3 1067 328 161 12 0 chr17 63282718 63282799 -31989852 - L1Md_F2 LINE L1 0 6582 6501 3 1067 1866 113 12 69 chr17 63283642 63283976 -31988675 + ORR1A2 LTR MaLR 9 323 -4 3 1067 242 267 0 0 chr17 63284842 63284902 -31987749 - ID2 SINE ID -19 64 5 3 1067 273 29 0 0 chr17 63285220 63285254 -31987397 + (TC)n Simple_repeat Simple_repeat 1 34 0 3 1067 207 0 0 0 chr17 63285254 63285276 -31987375 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 1067 718 158 24 79 chr17 63285311 63285515 -31987136 + RMER17C LTR ERVK 7 236 -722 3 1067 747 62 0 0 chr17 63285515 63285612 -31987039 + (TTC)n Simple_repeat Simple_repeat 1 97 0 3 1067 718 218 37 39 chr17 63285612 63285776 -31986875 + RMER17C LTR ERVK 122 293 -117 3 1067 273 219 58 47 chr17 63286244 63286330 -31986321 - L2b LINE L2 -76 3299 3213 3 1067 307 228 15 0 chr17 63286519 63286601 -31986050 - MLT1A1 LTR MaLR -42 366 257 3 1067 198 0 0 0 chr17 63286881 63286903 -31985748 + (TTTG)n Simple_repeat Simple_repeat 4 25 0 4 1067 261 0 0 0 chr17 63287867 63287896 -31984755 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1067 326 165 55 142 chr17 63287896 63287924 -31984727 + Lx9 LINE L1 7518 7536 -108 4 1067 1723 11 0 0 chr17 63287924 63288112 -31984539 - B2_Mm1a SINE B2 -4 189 2 4 1067 326 165 55 142 chr17 63288112 63288210 -31984441 + Lx9 LINE L1 7537 7633 -11 4 1067 396 0 0 0 chr17 63288498 63288542 -31984109 + (GA)n Simple_repeat Simple_repeat 1 44 0 4 1067 232 0 105 0 chr17 63288902 63288940 -31983711 + (TCTA)n Simple_repeat Simple_repeat 1 42 0 4 1067 196 77 0 49 chr17 63288959 63289000 -31983651 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 4 1067 261 0 0 0 chr17 63289000 63289029 -31983622 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1067 530 293 0 0 chr17 63289833 63289966 -31982685 - L2 LINE L2 -525 2894 2762 4 1067 2080 104 32 86 chr17 63290305 63290610 -31982041 + RMER17C LTR ERVK 1 273 -137 4 1067 387 0 0 0 chr17 63290610 63290653 -31981998 + (AATAG)n Simple_repeat Simple_repeat 1 43 0 4 1067 2080 104 32 86 chr17 63290653 63290779 -31981872 + RMER17C LTR ERVK 274 408 -2 4 1067 187 260 63 25 chr17 63290830 63290909 -31981742 - L3 LINE CR1 -26 4463 4382 4 1067 227 331 103 29 chr17 63290923 63291097 -31981554 - L3 LINE CR1 -182 4307 4121 4 1067 350 21 21 0 chr17 63291183 63291230 -31981421 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 4 1067 188 35 35 0 chr17 63291230 63291259 -31981392 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 4 1067 447 19 0 0 chr17 63291572 63291624 -31981027 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1067 249 33 0 0 chr17 63291624 63291653 -31980998 + (GA)n Simple_repeat Simple_repeat 2 31 0 4 1067 243 88 0 0 chr17 63292232 63292266 -31980385 + (TTTCC)n Simple_repeat Simple_repeat 3 36 0 4 1067 272 282 0 14 chr17 63292633 63292705 -31979946 + MER5A DNA MER1_type 119 189 0 4 1067 180 0 0 0 chr17 63293167 63293187 -31979464 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 4 1067 1026 108 6 12 chr17 63293187 63293347 -31979304 - B2_Mm1a SINE B2 -33 160 2 4 1067 381 213 0 22 chr17 63293494 63293585 -31979066 + B1_Mus2 SINE Alu 62 144 -5 4 1067 1090 117 6 6 chr17 63293609 63293789 -31978862 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 1067 3239 56 2 8 chr17 63294291 63294689 -31977962 + MTA_Mm LTR MaLR 1 396 0 4 1067 6774 83 6 0 chr17 63295304 63296192 -31976459 + L1_Mus3 LINE L1 5745 6637 -1 4 1067 3158 123 16 14 chr17 63296473 63296974 -31975677 + Lx2 LINE L1 6496 6997 0 4 1067 375 127 0 0 chr17 63297155 63297218 -31975433 + (GGA)n Simple_repeat Simple_repeat 1 63 0 4 1067 211 309 170 14 chr17 63297721 63297866 -31974785 + MIRb SINE MIR 36 216 -52 4 1067 441 0 0 0 chr17 63298672 63298721 -31973930 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1067 186 360 40 8 chr17 63299328 63299454 -31973197 + MIRc SINE MIR 24 153 -115 4 1067 653 113 60 0 chr17 63299609 63299777 -31972874 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 4 1067 746 96 16 68 chr17 63299839 63300029 -31972622 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 4 1067 966 125 0 7 chr17 63300107 63300252 -31972399 + B1_Mus1 SINE Alu 5 148 0 4 1067 719 311 55 59 chr17 63300580 63301052 -31971599 + L1ME2z LINE L1 4625 5094 -1052 4 1067 325 150 0 0 chr17 63301079 63301139 -31971512 + RLTR12A LTR ERVK 1 60 -508 4 1067 836 171 124 36 chr17 63301141 63301390 -31971261 + RLTR12A LTR ERVK 294 564 -4 4 1067 410 307 71 48 chr17 63301392 63301793 -31970858 + L1ME2z LINE L1 5124 5536 -908 4 1067 291 231 0 44 chr17 63301901 63301969 -31970682 + ID4_ SINE ID 18 82 -1 4 1067 832 222 71 24 chr17 63302077 63302289 -31970362 + ID_B1 SINE B4 2 223 -1 4 1067 828 267 146 64 chr17 63302312 63302957 -31969694 + L1ME2z LINE L1 5747 6444 0 4 1067 423 275 45 15 chr17 63303836 63303969 -31968682 + MTEa LTR MaLR 1 137 -242 4 1067 235 364 50 29 chr17 63303969 63304074 -31968577 + MT2A LTR ERVL 1 243 -290 4 1067 796 174 249 6 chr17 63305300 63305473 -31967178 - B3 SINE B2 0 216 2 4 1067 1258 118 27 0 chr17 63305480 63305666 -31966985 - B2_Mm2 SINE B2 -4 191 1 4 1067 565 335 82 33 chr17 63307246 63307576 -31965075 + ORR1E LTR MaLR 8 353 -6 4 1068 744 85 0 0 chr17 63307945 63308051 -31964600 + B2_Mm2 SINE B2 2 107 -88 4 1068 403 246 53 15 chr17 63308186 63308304 -31964347 - Lx7 LINE L1 0 7696 7578 4 1068 425 48 32 0 chr17 63308304 63308367 -31964284 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 4 1068 403 284 59 15 chr17 63308367 63308443 -31964208 - Lx7 LINE L1 -119 7577 7560 4 1068 366 80 0 0 chr17 63308460 63308510 -31964141 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1068 1232 55 27 32 chr17 63309813 63310001 -31962650 + B2_Mm2 SINE B2 8 194 -1 4 1068 254 151 0 19 chr17 63310366 63310420 -31962231 - Lx4B LINE L1 0 7058 7006 4 1068 256 178 0 0 chr17 63310433 63310478 -31962173 - Lx4B LINE L1 -269 6789 6745 4 1068 2346 77 38 0 chr17 63315216 63315529 -31957122 + ORR1A2 LTR MaLR 1 325 -2 4 1068 802 279 64 45 chr17 63315603 63315869 -31956782 - B4A SINE B4 0 292 22 4 1068 1255 39 0 27 chr17 63315883 63316066 -31956585 + (TTCCC)n Simple_repeat Simple_repeat 3 180 0 4 1068 1012 72 0 48 chr17 63316090 63316279 -31956372 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 4 1068 545 277 7 0 chr17 63316283 63316424 -31956227 - B1_Mur2 SINE Alu -6 143 2 4 1068 2090 190 127 73 chr17 63316426 63316931 -31955720 + MT2A LTR ERVL 1 532 -1 4 1068 583 141 266 115 chr17 63317107 63317299 -31955352 - URR1B DNA MER1_type -1 224 4 4 1068 378 0 0 0 chr17 63318321 63318363 -31954288 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1068 201 74 0 0 chr17 63318741 63318768 -31953883 + (A)n Simple_repeat Simple_repeat 1 27 0 4 1068 426 275 105 35 chr17 63319392 63319592 -31953059 + B3 SINE B2 1 214 -2 4 1068 3347 274 53 24 chr17 63320076 63321099 -31951552 - Lx8 LINE L1 -230 7243 6192 4 1068 1350 271 39 21 chr17 63321132 63321659 -31950992 - L1_Mur3 LINE L1 -2298 3842 3301 4 1068 232 270 95 0 chr17 63321663 63321737 -31950914 - B3A SINE B2 -117 81 1 4 1068 426 335 121 26 chr17 63321746 63322473 -31950178 - L1_Rod LINE L1 -3817 2030 1235 4 1068 1671 177 45 21 chr17 63322548 63322882 -31949769 + MTC LTR MaLR 3 344 -77 4 1068 339 105 0 0 chr17 63323106 63323163 -31949488 + (TTG)n Simple_repeat Simple_repeat 1 57 0 4 1068 219 88 0 0 chr17 63323973 63324007 -31948644 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 4 1068 254 306 107 75 chr17 63324084 63324243 -31948408 - ID_B1 SINE B4 -57 167 4 4 1068 25 0 0 0 chr17 63325003 63325028 -31947623 + AT_rich Low_complexity Low_complexity 1 25 0 4 1068 396 88 0 0 chr17 63326126 63326183 -31946468 + (A)n Simple_repeat Simple_repeat 1 57 0 4 1068 243 0 0 0 chr17 63327211 63327238 -31945413 + (TC)n Simple_repeat Simple_repeat 1 27 0 4 1068 429 20 0 0 chr17 63327238 63327287 -31945364 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1068 756 159 31 13 chr17 63328346 63328505 -31944146 + B2_Mm2 SINE B2 34 195 0 4 1068 213 287 154 18 chr17 63328736 63328846 -31943805 + B1F SINE Alu 25 149 0 4 1068 4878 214 124 38 chr17 63332227 63332522 -31940129 - Lx7 LINE L1 0 7696 7330 4 1068 210 37 0 0 chr17 63332522 63332549 -31940102 + (CCAA)n Simple_repeat Simple_repeat 2 28 0 4 1068 4878 214 124 38 chr17 63332549 63333539 -31939112 - Lx7 LINE L1 -367 7329 6300 4 1068 707 160 189 23 chr17 63333769 63333986 -31938665 - RMER20B LTR ERVK -214 413 161 4 1068 1181 298 143 57 chr17 63334370 63334797 -31937854 + ORR1E-int LTR MaLR 5 528 -1052 4 1068 424 156 0 13 chr17 63334797 63334875 -31937776 + PB1D7 SINE Alu 43 119 -1 4 1068 1181 298 143 57 chr17 63334875 63335683 -31936968 + ORR1E-int LTR MaLR 529 1528 -52 4 1068 636 321 32 89 chr17 63335683 63336063 -31936588 + ORR1E LTR MaLR 2 359 0 4 1068 305 277 14 49 chr17 63336481 63336625 -31936026 - Lx8 LINE L1 -1 7472 7334 4 1068 595 171 107 0 chr17 63336627 63336864 -31935787 - Lx9 LINE L1 -8 7636 7350 4 1068 486 108 0 0 chr17 63336930 63337013 -31935638 + (TG)n Simple_repeat Simple_repeat 2 84 0 4 1068 572 156 9 0 chr17 63337400 63337509 -31935142 + CT-rich Low_complexity Low_complexity 3 112 0 4 1068 852 146 0 7 chr17 63337515 63337653 -31934998 - B1_Mur4 SINE Alu -7 143 7 4 1068 457 299 50 46 chr17 63337653 63337891 -31934760 - L1M4 LINE L1 -5602 940 702 4 1068 567 224 15 7 chr17 63338054 63338189 -31934462 - B1_Mur1 SINE Alu -1 148 13 4 1068 422 291 15 7 chr17 63338446 63338581 -31934070 - L1M4 LINE L1 -6393 149 14 4 1068 556 214 87 72 chr17 63338596 63338803 -31933848 - L1M7 LINE L1 -4625 1593 1384 4 1068 283 315 97 7 chr17 63338882 63339026 -31933625 + MER77 LTR ERVL 450 606 -1 4 1068 1001 138 0 0 chr17 63339139 63339284 -31933367 + B1_Mus2 SINE Alu 1 145 -2 4 1068 673 325 52 39 chr17 63339968 63340275 -31932376 - ORR1E LTR MaLR -2 357 47 4 1068 459 0 0 0 chr17 63340777 63340828 -31931823 + (TA)n Simple_repeat Simple_repeat 2 52 0 4 1068 242 270 16 0 chr17 63341990 63342053 -31930598 + MER103 DNA DNA 57 120 -46 4 1068 1071 95 6 16 chr17 63342126 63342308 -31930343 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 1068 587 159 9 0 chr17 63342325 63342438 -31930213 + GA-rich Low_complexity Low_complexity 1 114 0 4 1068 279 250 111 82 chr17 63342908 63343043 -31929608 + MER58A DNA MER1_type 26 164 -60 4 1068 336 341 56 51 chr17 63343249 63343465 -31929186 + B4A SINE B4 4 220 -72 4 1068 249 33 0 0 chr17 63343466 63343496 -31929155 + (GA)n Simple_repeat Simple_repeat 1 30 0 4 1068 272 262 12 24 chr17 63343533 63343615 -31929036 + (CATATA)n Simple_repeat Simple_repeat 2 82 0 4 1068 414 292 7 74 chr17 63344152 63344300 -31928351 + RSINE1 SINE B4 28 165 0 4 1068 210 143 0 0 chr17 63344305 63344340 -31928311 + (TAA)n Simple_repeat Simple_repeat 2 36 0 4 1068 420 296 72 36 chr17 63345036 63345257 -31927394 - MER77 LTR ERVL -2 605 377 4 1068 463 270 60 7 chr17 63345288 63345437 -31927214 - MER77 LTR ERVL -446 161 5 4 1068 244 232 22 89 chr17 63346036 63346126 -31926525 - Charlie7 DNA MER1_type -2513 99 16 4 1068 183 42 0 0 chr17 63346139 63346163 -31926488 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1068 447 287 41 44 chr17 63347627 63347966 -31924685 + RLTR15 LTR ERVK 6 343 -16 4 1068 677 168 7 0 chr17 63350547 63350702 -31921949 + (TG)n Simple_repeat Simple_repeat 1 156 0 4 1068 471 113 0 0 chr17 63351895 63351966 -31920685 + (GA)n Simple_repeat Simple_repeat 2 72 0 5 1068 649 288 18 40 chr17 63351980 63352208 -31920443 + ID_B1 SINE B4 2 224 0 5 1068 578 174 9 0 chr17 63352228 63352343 -31920308 + URR1B DNA MER1_type 110 225 0 5 1068 240 35 0 0 chr17 63352780 63352809 -31919842 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 1068 359 215 53 11 chr17 63353397 63353491 -31919160 - B1F SINE Alu -51 98 1 5 1068 619 276 95 26 chr17 63353684 63353948 -31918703 - MLT1D LTR MaLR -4 501 220 5 1068 244 310 22 44 chr17 63354029 63354120 -31918531 - MLT1D LTR MaLR -537 90 2 5 1068 696 249 75 42 chr17 63355367 63355574 -31917077 - B3 SINE B2 -3 192 2 5 1068 315 0 0 0 chr17 63355804 63355839 -31916812 + (GA)n Simple_repeat Simple_repeat 1 35 0 5 1068 2486 83 3 12 chr17 63356025 63356355 -31916296 + ORR1A2 LTR MaLR 1 327 0 5 1068 266 304 82 57 chr17 63356355 63356672 -31915979 - L2 LINE L2 -843 2576 2252 5 1068 211 222 168 20 chr17 63356771 63356872 -31915779 + MIR SINE MIR 90 205 -57 5 1068 21 0 0 0 chr17 63357214 63357235 -31915416 + AT_rich Low_complexity Low_complexity 1 21 0 5 1068 351 65 0 0 chr17 63360828 63360874 -31911777 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1068 522 0 0 0 chr17 63362159 63362217 -31910434 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 1068 205 284 11 69 chr17 63363853 63363940 -31908711 - MIRm SINE MIR -89 119 38 5 1068 367 293 37 22 chr17 63364679 63364815 -31907836 - B1F1 SINE Alu -11 138 1 5 1068 21 0 0 0 chr17 63364819 63364840 -31907811 + AT_rich Low_complexity Low_complexity 1 21 0 5 1068 488 241 73 0 chr17 63365699 63365836 -31906815 + Zaphod DNA Tip100 327 473 -3558 5 1068 543 299 24 19 chr17 63366247 63366491 -31906160 - B4A SINE B4 -1 291 11 5 1068 382 21 0 0 chr17 63366506 63366553 -31906098 - ORR1B1 LTR MaLR -8 386 340 5 1068 248 154 0 0 chr17 63366552 63366591 -31906060 - ORR1B1 LTR MaLR -104 223 185 5 1068 336 146 0 0 chr17 63366588 63366643 -31906008 - ORR1B1 LTR MaLR -272 55 1 5 1068 360 239 110 48 chr17 63366671 63366816 -31905835 - L1MB2 LINE L1 -26 6145 5992 5 1068 1227 231 123 5 chr17 63366983 63367357 -31905294 + Zaphod DNA Tip100 3603 4020 -11 5 1068 240 319 44 0 chr17 63367701 63367792 -31904859 + MIR SINE MIR 136 230 -32 5 1068 2872 298 85 37 chr17 63369789 63369957 -31902694 - Lx8 LINE L1 -9 7464 7311 5 1068 1018 135 6 6 chr17 63369957 63370136 -31902515 + (TCC)n Simple_repeat Simple_repeat 2 180 0 5 1068 2872 298 85 37 chr17 63370136 63371176 -31901475 - Lx8 LINE L1 -163 7310 6198 5 1068 1137 62 14 0 chr17 63371300 63371445 -31901206 + B1_Mus1 SINE Alu 2 148 0 5 1068 2305 87 15 59 chr17 63371629 63371970 -31900681 + ORR1A3 LTR MaLR 1 326 0 5 1068 371 395 42 60 chr17 63372669 63372954 -31899697 + MLT1F2 LTR MaLR 203 482 -78 5 1068 318 89 32 32 chr17 63373191 63373284 -31899367 + T-rich Low_complexity Low_complexity 3 95 0 5 1068 1868 146 64 13 chr17 63373408 63373797 -31898854 + RMER17C LTR ERVK 1 409 -1 5 1068 315 0 0 0 chr17 63373797 63373832 -31898819 + (TC)n Simple_repeat Simple_repeat 1 35 0 5 1068 268 288 47 23 chr17 63374030 63374158 -31898493 + MIR SINE MIR 34 164 -98 5 1068 222 118 0 0 chr17 63375085 63375119 -31897532 + (A)n Simple_repeat Simple_repeat 1 34 0 5 1068 240 35 0 0 chr17 63375334 63375363 -31897288 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1068 198 0 0 0 chr17 63376177 63376199 -31896452 + (CAAT)n Simple_repeat Simple_repeat 1 22 0 5 1068 246 335 34 17 chr17 63377002 63377165 -31895486 - MIRb SINE MIR -95 181 17 5 1068 432 0 0 0 chr17 63378005 63378053 -31894598 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1068 204 323 50 10 chr17 63378539 63378639 -31894012 + MIR SINE MIR 50 153 -55 5 1068 1358 92 16 0 chr17 63379619 63379803 -31892848 - B2_Mm2 SINE B2 -8 187 1 5 1068 356 314 138 51 chr17 63379908 63380263 -31892388 + L1MA6 LINE L1 5766 6151 -149 5 1068 270 0 0 0 chr17 63380312 63380342 -31892309 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 5 1068 1730 219 129 13 chr17 63380487 63380944 -31891707 - RLTR20D LTR ERVK -8 560 51 5 1068 387 56 0 0 chr17 63381680 63381734 -31890917 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 1068 409 309 181 37 chr17 63383411 63384136 -31888515 + L1M5 LINE L1 4547 5375 -771 5 1068 417 323 95 21 chr17 63384473 63384935 -31887716 + MLT2B4 LTR ERVL 8 519 -1 5 1068 380 262 152 6 chr17 63384952 63385117 -31887534 + L1MEc LINE L1 181 369 -6031 5 1068 210 37 0 0 chr17 63386325 63386352 -31886299 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 1068 198 0 0 0 chr17 63386637 63386659 -31885992 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1068 3779 153 166 10 chr17 63388534 63389304 -31883347 - RMER19B LTR ERVK -12 890 1 5 1068 527 301 97 27 chr17 63389716 63389975 -31882676 + B4A SINE B4 2 278 -14 5 1068 257 250 48 0 chr17 63390132 63390216 -31882435 - LTR16A LTR ERVL -104 347 260 5 1068 3471 144 68 43 chr17 63390313 63390633 -31882018 + RMER6D LTR ERVK 1 358 -362 5 1068 225 0 0 0 chr17 63390633 63390658 -31881993 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 1068 3471 144 68 43 chr17 63390658 63390915 -31881736 + RMER6D LTR ERVK 359 621 -99 5 1068 2182 153 27 40 chr17 63390915 63391317 -31881334 - RMER10B LTR ERVL -1 397 1 5 1068 3471 144 68 43 chr17 63391317 63391440 -31881211 + RMER6D LTR ERVK 622 719 -1 5 1068 282 340 40 10 chr17 63391747 63391848 -31880803 - ERVL-int LTR ERVL -2384 3373 3270 5 1068 359 362 21 16 chr17 63392212 63392400 -31880251 - HERV16-int LTR ERVL -4796 200 12 5 1068 195 69 0 0 chr17 63392994 63393023 -31879628 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 1068 1251 99 49 6 chr17 63393025 63393208 -31879443 - B2_Mm2 SINE B2 -3 192 2 5 1068 38 39 0 0 chr17 63393677 63393729 -31878922 + AT_rich Low_complexity Low_complexity 1 52 0 5 1068 401 258 41 16 chr17 63398632 63398754 -31873897 + B4A SINE B4 106 230 -62 5 1068 821 230 9 65 chr17 63398755 63398969 -31873682 + B3 SINE B2 2 203 -13 5 1068 213 121 0 0 chr17 63398973 63399006 -31873645 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 5 1068 370 165 19 0 chr17 63399117 63399220 -31873431 + GA-rich Low_complexity Low_complexity 1 105 0 5 1068 268 299 134 24 chr17 63399309 63399518 -31873133 + L1MEb LINE L1 320 551 -5585 5 1068 637 190 84 22 chr17 63399698 63399737 -31872914 - L1MEf LINE L1 -5174 1026 988 5 1068 360 0 0 0 chr17 63399737 63399777 -31872874 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 1068 637 196 81 22 chr17 63399777 63399942 -31872709 - L1MEf LINE L1 -5213 987 812 5 1068 275 262 64 18 chr17 63400713 63400822 -31871829 + L1MEb LINE L1 3264 3377 -2769 5 1068 2966 78 42 0 chr17 63401812 63402196 -31870455 + MTB LTR MaLR 1 400 0 5 1068 2250 72 0 62 chr17 63402352 63402692 -31869959 - ORR1A2 LTR MaLR -8 319 1 5 1068 241 325 65 56 chr17 63402721 63403076 -31869575 + L1MEb LINE L1 5288 5645 -519 5 1068 186 43 0 0 chr17 63403083 63403106 -31869545 + (GA)n Simple_repeat Simple_repeat 2 24 0 5 1068 2189 149 30 13 chr17 63403382 63403776 -31868875 - MTC LTR MaLR -8 413 13 5 1068 471 87 0 0 chr17 63403945 63404014 -31868637 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 1068 597 291 81 56 chr17 63404225 63404633 -31868018 - Tigger13a DNA MER2_type -37 734 317 5 1068 423 0 0 0 chr17 63405409 63405456 -31867195 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1068 473 250 0 37 chr17 63405895 63406082 -31866569 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1068 237 274 0 0 chr17 63406118 63406202 -31866449 + (CA)n Simple_repeat Simple_repeat 1 84 0 5 1068 477 257 0 0 chr17 63406253 63406432 -31866219 + (CA)n Simple_repeat Simple_repeat 1 179 0 5 1068 237 283 90 10 chr17 63410941 63411041 -31861610 - PB1D10 SINE Alu -9 108 1 5 1068 2032 209 24 33 chr17 63411456 63411967 -31860684 + RCHARR1 DNA MER1_type 349 854 -120 5 1068 518 169 21 10 chr17 63411952 63412048 -31860603 + B1_Mur4 SINE Alu 54 150 0 5 1068 306 255 38 29 chr17 63412060 63412165 -31860486 + RCHARR1 DNA MER1_type 838 943 -31 5 1068 326 115 25 37 chr17 63413095 63413176 -31859475 + CT-rich Low_complexity Low_complexity 3 82 0 5 1068 485 233 119 6 chr17 63413954 63414114 -31858537 - B4A SINE B4 -75 217 40 5 1068 3481 30 2 0 chr17 63414853 63415248 -31857403 + MTA_Mm LTR MaLR 1 396 0 5 1068 7909 76 32 2 chr17 63415251 63416315 -31856336 + MTA_Mm-int LTR MaLR 3 1098 0 5 1068 3432 25 8 0 chr17 63416315 63416708 -31855943 + MTA_Mm LTR MaLR 1 396 0 5 1068 181 241 69 0 chr17 63416785 63416843 -31855808 - MIR SINE MIR -122 86 25 5 1068 606 28 0 0 chr17 63416914 63416986 -31855665 + (TCC)n Simple_repeat Simple_repeat 3 74 0 5 1068 188 216 0 19 chr17 63417056 63417108 -31855543 + CT-rich Low_complexity Low_complexity 4 54 0 5 1068 1651 133 27 70 chr17 63417745 63418075 -31854576 + ORR1A3 LTR MaLR 1 316 -10 5 1068 256 253 23 35 chr17 63420328 63420414 -31852237 + GA-rich Low_complexity Low_complexity 1 85 0 5 1068 432 0 0 0 chr17 63420439 63420487 -31852164 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1068 883 76 23 0 chr17 63421574 63421706 -31850945 + (TTCC)n Simple_repeat Simple_repeat 3 137 0 5 1068 843 67 0 48 chr17 63421718 63421843 -31850808 - B1_Mus1 SINE Alu 0 148 30 5 1068 242 237 153 48 chr17 63422671 63422795 -31849856 + L2a LINE L2 3290 3426 0 5 1068 201 108 0 0 chr17 63423568 63423605 -31849046 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 5 1068 23 0 0 0 chr17 63424455 63424478 -31848173 + AT_rich Low_complexity Low_complexity 1 23 0 5 1068 324 242 53 0 chr17 63426827 63426922 -31845729 - PB1D9 SINE Alu -20 100 1 5 1068 468 282 137 11 chr17 63427662 63427845 -31844806 - MIR SINE MIR -39 223 18 5 1068 285 98 0 0 chr17 63430965 63431006 -31841645 + (A)n Simple_repeat Simple_repeat 1 41 0 5 1068 204 333 24 0 chr17 63431977 63432061 -31840590 - MIR SINE MIR -124 138 53 5 1068 22 56 0 0 chr17 63433182 63433218 -31839433 + AT_rich Low_complexity Low_complexity 1 36 0 5 1068 375 297 102 13 chr17 63433303 63433460 -31839191 + MIRc SINE MIR 54 224 -44 5 1068 357 300 15 30 chr17 63433542 63433676 -31838975 + ID_B1 SINE B4 84 215 -9 5 1068 266 346 0 0 chr17 63433683 63433761 -31838890 + ID4_ SINE ID 3 80 -3 5 1068 280 331 71 0 chr17 63434191 63434345 -31838306 + L1MC4a LINE L1 5594 5758 -2124 5 1068 321 314 107 80 chr17 63434440 63434841 -31837810 + L1MC4a LINE L1 5935 6346 -1536 5 1068 285 319 159 0 chr17 63435018 63435175 -31837476 + L1MC4a LINE L1 6642 6823 -1059 5 1068 536 284 87 95 chr17 63435181 63435664 -31836987 + L1MC4a LINE L1 6943 7440 -442 5 1068 296 369 12 53 chr17 63435664 63435833 -31836818 + RSINE1 SINE B4 4 165 0 5 1068 536 284 87 95 chr17 63435833 63436073 -31836578 + L1MC4a LINE L1 7441 7660 -222 5 1068 655 251 23 28 chr17 63436105 63436294 -31836357 + B3 SINE B2 1 186 -9 6 1068 297 258 61 81 chr17 63436299 63436497 -31836154 + L1MC4a LINE L1 7686 7879 -3 5 1068 279 0 0 0 chr17 63437395 63437426 -31835225 + (TCTA)n Simple_repeat Simple_repeat 3 33 0 6 1068 207 160 40 0 chr17 63437431 63437481 -31835170 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 1068 387 119 0 0 chr17 63437494 63437561 -31835090 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 6 1068 4452 75 14 13 chr17 63437831 63438457 -31834194 + MusHAL1 LINE L1 1940 2566 -146 6 1068 339 121 0 0 chr17 63438496 63438554 -31834097 + (A)n Simple_repeat Simple_repeat 1 58 0 6 1068 297 280 19 48 chr17 63438707 63438812 -31833839 - L1M4 LINE L1 -454 5724 5623 6 1069 3227 199 69 49 chr17 63439503 63440341 -31832310 + RMER13A LTR ERVK 1 855 -5 6 1069 279 0 0 0 chr17 63440496 63440527 -31832124 + (GA)n Simple_repeat Simple_repeat 1 31 0 6 1069 182 160 20 0 chr17 63440536 63440586 -31832065 + GA-rich Low_complexity Low_complexity 1 51 0 6 1069 239 0 32 0 chr17 63440829 63440860 -31831791 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6 1069 3195 56 5 0 chr17 63440940 63441335 -31831316 - L1_Mus1 LINE L1 -584 5983 5587 6 1069 4375 55 2 14 chr17 63441338 63441890 -31830761 + L1_Mus1 LINE L1 6023 6567 0 6 1069 244 238 185 12 chr17 63442231 63442312 -31830339 - L2a LINE L2 -25 3401 3307 6 1069 203 336 51 7 chr17 63442397 63442535 -31830116 - L2a LINE L2 -276 3150 3007 6 1069 385 301 36 7 chr17 63442860 63442997 -31829654 + B1F1 SINE Alu 1 141 -8 6 1069 228 35 0 0 chr17 63444732 63444761 -31827890 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 6 1069 647 159 8 16 chr17 63446005 63446133 -31826518 + ORR1C2 LTR MaLR 1 127 -257 6 1069 437 211 84 0 chr17 63446247 63446342 -31826309 - 5S rRNA rRNA -11 110 8 6 1069 186 43 0 0 chr17 63446674 63446697 -31825954 + (CAA)n Simple_repeat Simple_repeat 3 25 0 6 1069 550 325 77 72 chr17 63446815 63446882 -31825769 - HAL1b LINE L1 -520 1489 1435 6 1069 1629 31 5 10 chr17 63446882 63447076 -31825575 - B2_Mm1a SINE B2 0 193 1 6 1069 550 325 77 72 chr17 63447076 63447565 -31825086 - HAL1b LINE L1 -575 1434 930 6 1069 211 228 0 81 chr17 63448585 63448647 -31824004 + T-rich Low_complexity Low_complexity 2 58 0 6 1069 647 224 42 7 chr17 63449042 63449186 -31823465 + B3A SINE B2 9 157 -41 6 1069 486 0 0 0 chr17 63449195 63449249 -31823402 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 1069 319 261 169 36 chr17 63450562 63450757 -31821894 - MER33 DNA MER1_type -96 228 8 6 1069 226 224 13 38 chr17 63450825 63450904 -31821747 + ID4_ SINE ID 1 77 -6 6 1069 246 305 0 50 chr17 63451813 63451913 -31820738 + MurSatRep1 Unknown Unknown 220 314 -1823 6 1069 605 163 133 44 chr17 63452480 63452615 -31820036 + B1_Mus2 SINE Alu 1 147 0 6 1069 277 261 39 146 chr17 63452737 63452840 -31819811 + PB1D10 SINE Alu 15 106 -11 6 1069 216 0 0 0 chr17 63452840 63452864 -31819787 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6 1069 452 240 264 52 chr17 63453387 63453679 -31818972 - ORR1D2 LTR MaLR 0 370 8 6 1069 231 36 0 0 chr17 63453839 63453867 -31818784 + (T)n Simple_repeat Simple_repeat 1 28 0 6 1069 264 289 69 15 chr17 63453902 63454032 -31818619 - Tigger15a DNA TcMar -578 137 1 6 1069 480 99 0 0 chr17 63455982 63456053 -31816598 + (CA)n Simple_repeat Simple_repeat 2 72 0 6 1069 229 293 29 29 chr17 63456314 63456416 -31816235 + PB1D10 SINE Alu 1 102 -15 6 1069 180 125 0 0 chr17 63456750 63456782 -31815869 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 1069 198 292 198 34 chr17 63457509 63457686 -31814965 - MIRb SINE MIR -21 247 42 6 1069 203 306 11 56 chr17 63458671 63458761 -31813890 - L2a LINE L2 -8 3418 3333 6 1069 450 0 0 0 chr17 63459209 63459259 -31813392 + (TCCC)n Simple_repeat Simple_repeat 1 50 0 6 1069 696 24 0 0 chr17 63459259 63459341 -31813310 + (TTTC)n Simple_repeat Simple_repeat 1 82 0 6 1069 213 65 0 0 chr17 63461029 63461060 -31811591 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 6 1069 384 319 117 34 chr17 63461223 63461574 -31811077 + L1ME3B LINE L1 4431 4810 -1336 6 1069 261 356 42 24 chr17 63461804 63461971 -31810680 - MIR SINE MIR -40 222 53 6 1069 289 357 74 19 chr17 63462162 63462419 -31810232 + L1ME3B LINE L1 5313 5583 -541 6 1069 303 341 12 84 chr17 63462698 63462948 -31809703 + L1ME3B LINE L1 5713 5944 -296 6 1069 264 277 0 0 chr17 63463243 63463308 -31809343 + B4A SINE B4 225 289 -3 6 1069 598 174 98 8 chr17 63463596 63463729 -31808922 + B1_Mus1 SINE Alu 3 147 -1 6 1069 340 20 41 0 chr17 63464449 63464498 -31808153 + (GA)n Simple_repeat Simple_repeat 1 51 0 6 1069 207 162 0 0 chr17 63464509 63464546 -31808105 + CT-rich Low_complexity Low_complexity 4 40 0 6 1069 399 145 170 264 chr17 63464553 63464712 -31807939 - B1_Mur3 SINE Alu -5 144 1 6 1069 559 272 25 15 chr17 63465534 63465732 -31806919 + RMER30 DNA MER1_type 2 201 -1 6 1069 25 0 0 0 chr17 63465950 63465975 -31806676 + AT_rich Low_complexity Low_complexity 1 25 0 6 1069 782 257 5 0 chr17 63466837 63467039 -31805612 - B3 SINE B2 -5 211 9 6 1069 234 0 0 0 chr17 63467385 63467411 -31805240 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 1069 699 12 0 0 chr17 63467758 63467838 -31804813 + (TTCTC)n Simple_repeat Simple_repeat 4 83 0 6 1069 1585 192 60 60 chr17 63469546 63469887 -31802764 + RMER10B LTR ERVL 1 343 -55 6 1069 468 93 0 0 chr17 63469887 63469962 -31802689 + (CA)n Simple_repeat Simple_repeat 1 75 0 6 1069 1585 192 60 60 chr17 63469962 63470018 -31802633 + RMER10B LTR ERVL 344 398 0 6 1069 277 320 10 10 chr17 63470256 63470360 -31802291 + L2a LINE L2 3301 3404 -22 6 1069 360 0 0 0 chr17 63471393 63471433 -31801218 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1069 402 57 0 0 chr17 63475200 63475253 -31797398 + (GAAA)n Simple_repeat Simple_repeat 2 54 0 6 1069 1963 75 41 65 chr17 63475333 63475673 -31796978 + IAPLTR1a_Mm LTR ERVK 1 332 -5 6 1069 57809 18 8 3 chr17 63475685 63482097 -31790554 + IAPEz-int LTR ERVK 35 6481 0 6 1069 1959 75 41 65 chr17 63482097 63482437 -31790214 + IAPLTR1a_Mm LTR ERVK 1 332 -5 6 1069 189 0 0 0 chr17 63483686 63483707 -31788944 + (TA)n Simple_repeat Simple_repeat 2 22 0 6 1069 717 196 214 0 chr17 63485292 63485465 -31787186 - B3 SINE B2 -5 211 2 6 1069 495 0 0 0 chr17 63485947 63486002 -31786649 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1069 192 377 0 0 chr17 63487045 63487122 -31785529 + L2 LINE L2 2827 2903 -516 6 1069 276 30 0 0 chr17 63489036 63489069 -31783582 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1069 6535 54 38 8 chr17 63489521 63490347 -31782304 + L1_Mus1 LINE L1 5708 6558 -9 6 1069 1162 78 0 0 chr17 63490347 63490488 -31782163 + B1_Mus1 SINE Alu 2 142 -6 6 1069 252 111 0 0 chr17 63490520 63490565 -31782086 + (A)n Simple_repeat Simple_repeat 1 45 0 6 1069 270 0 0 0 chr17 63491839 63491869 -31780782 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 6 1069 765 250 86 10 chr17 63492425 63492623 -31780028 + B3 SINE B2 3 215 -1 6 1069 267 31 0 0 chr17 63492834 63492866 -31779785 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 1069 450 124 0 0 chr17 63492866 63492955 -31779696 + (GA)n Simple_repeat Simple_repeat 2 90 0 6 1069 21 0 0 0 chr17 63495651 63495672 -31776979 + AT_rich Low_complexity Low_complexity 1 21 0 6 1069 318 209 120 17 chr17 63497415 63497532 -31775119 + B3A SINE B2 37 165 -33 6 1069 431 306 29 23 chr17 63497737 63497911 -31774740 - MER5B DNA MER1_type 0 178 4 6 1069 297 0 0 0 chr17 63498737 63498770 -31773881 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1069 266 322 78 49 chr17 63499219 63499340 -31773311 + L1M5 LINE L1 5342 5471 -702 6 1069 396 0 0 0 chr17 63499340 63499384 -31773267 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1069 266 318 81 50 chr17 63499384 63499515 -31773136 + L1M5 LINE L1 5471 5600 -640 6 1069 202 0 29 57 chr17 63500056 63500091 -31772560 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1069 227 116 47 0 chr17 63500502 63500545 -31772106 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 2 1069 301 197 182 0 chr17 63501346 63501412 -31771239 + MTEb LTR MaLR 29 106 -273 3 1069 294 309 65 0 chr17 63501422 63501545 -31771106 - MTE2b LTR MaLR -248 131 1 4 1069 633 270 154 28 chr17 63502354 63502788 -31769863 + L1_Mur3 LINE L1 5266 5754 -126 5 1069 4105 39 0 0 chr17 63503725 63504208 -31768443 - L1Md_F2 LINE L1 -754 5129 4647 6 1069 4218 30 6 2 chr17 63504198 63504701 -31767950 + L1Md_F2 LINE L1 5081 5585 -298 6 1069 8164 47 1 5 chr17 63504702 63505701 -31766950 + L1Md_F2 LINE L1 5587 6581 -1 6 1069 381 250 161 35 chr17 63506316 63506490 -31766161 + B3A SINE B2 2 197 -1 7 1069 387 41 0 0 chr17 63506586 63506635 -31766016 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 1069 28 29 0 0 chr17 63508652 63508687 -31763964 + AT_rich Low_complexity Low_complexity 1 35 0 9 1069 553 308 42 14 chr17 63510973 63511190 -31761461 + B4 SINE B4 1 223 -69 1 1069 225 108 0 0 chr17 63511228 63511265 -31761386 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1069 247 298 88 10 chr17 63513405 63513547 -31759104 + MIRc SINE MIR 65 221 -47 1 1069 378 0 0 0 chr17 63514586 63514628 -31758023 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1069 703 324 37 12 chr17 63514663 63514907 -31757744 + B4A SINE B4 2 251 -41 1 1069 236 186 0 173 chr17 63515008 63515112 -31757539 + L1_Mus1 LINE L1 6278 6363 -204 1 1069 1272 52 87 0 chr17 63515710 63515882 -31756769 - B2_Mm2 SINE B2 -7 188 2 1 1069 264 200 0 0 chr17 63516517 63516592 -31756059 + (CAGA)n Simple_repeat Simple_repeat 4 78 0 1 1069 450 235 0 0 chr17 63516626 63516796 -31755855 + (CA)n Simple_repeat Simple_repeat 1 170 0 1 1069 313 197 0 0 chr17 63516831 63516892 -31755759 + B1F1 SINE Alu 81 141 -8 1 1069 22 0 0 0 chr17 63519190 63519212 -31753439 + AT_rich Low_complexity Low_complexity 1 22 0 2 1069 240 256 244 44 chr17 63519223 63519358 -31753293 + RSINE1 SINE B4 4 165 0 2 1069 305 47 23 0 chr17 63519360 63519403 -31753248 + (TAA)n Simple_repeat Simple_repeat 1 44 0 2 1069 458 138 113 52 chr17 63519717 63519832 -31752819 - B1F SINE Alu -7 142 21 2 1069 357 191 118 67 chr17 63519832 63519852 -31752799 - ID_B1 SINE B4 -7 217 76 2 1069 288 0 0 0 chr17 63520261 63520293 -31752358 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1069 473 309 92 5 chr17 63524637 63524832 -31747819 + B4A SINE B4 2 213 -79 2 1069 360 0 0 0 chr17 63524862 63524902 -31747749 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1069 449 17 17 0 chr17 63526337 63526395 -31746256 + (CAA)n Simple_repeat Simple_repeat 2 60 0 2 1069 351 0 0 0 chr17 63526523 63526562 -31746089 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1069 518 234 97 144 chr17 63526777 63526972 -31745679 + B3A SINE B2 1 189 -27 3 1069 386 316 46 49 chr17 63526977 63527240 -31745411 + Tigger9b DNA MER2_type 65 326 -298 3 1069 477 0 0 0 chr17 63527428 63527481 -31745170 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1069 286 291 63 7 chr17 63527492 63527634 -31745017 - Lx4A LINE L1 -1152 5906 5757 3 1069 320 234 116 9 chr17 63527824 63527936 -31744715 + RSINE1 SINE B4 3 126 -39 3 1069 1176 68 0 0 chr17 63527961 63528107 -31744544 - B1_Mus2 SINE Alu -1 146 1 3 1069 274 333 16 8 chr17 63529802 63529929 -31742722 - L3 LINE CR1 -816 3673 3546 3 1069 233 255 0 0 chr17 63530210 63530261 -31742390 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 1069 329 246 132 23 chr17 63530355 63530484 -31742167 + B4 SINE B4 1 143 -149 3 1069 286 271 0 23 chr17 63530523 63530610 -31742041 + (CA)n Simple_repeat Simple_repeat 1 85 0 3 1069 252 143 0 0 chr17 63530850 63530892 -31741759 + (TAA)n Simple_repeat Simple_repeat 3 44 0 4 1069 297 0 0 0 chr17 63532122 63532155 -31740496 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1069 489 156 0 0 chr17 63532691 63532787 -31739864 + (TG)n Simple_repeat Simple_repeat 1 96 0 4 1069 348 227 51 10 chr17 63534384 63534482 -31738169 - MER5A DNA MER1_type -27 162 61 4 1069 180 224 186 12 chr17 63535594 63535680 -31736971 + L3 LINE CR1 3814 3914 -575 4 1069 2707 79 48 10 chr17 63536082 63536478 -31736173 + RLTR10A LTR ERVK 1 411 0 4 1069 536 24 0 186 chr17 63536480 63536582 -31736069 + RLTR10-int LTR ERVK 304 386 -1601 4 1069 1876 70 0 4 chr17 63536580 63536810 -31735841 + RLTR10-int LTR ERVK 1049 1277 -710 4 1069 5577 48 29 7 chr17 63536939 63537637 -31735014 + RLTR10-int LTR ERVK 1274 1986 -1 4 1069 2674 84 48 10 chr17 63537637 63538033 -31734618 + RLTR10A LTR ERVK 1 411 0 4 1069 192 40 0 0 chr17 63541215 63541240 -31731411 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1069 202 239 0 0 chr17 63541682 63541728 -31730923 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 4 1069 552 30 0 0 chr17 63542243 63542309 -31730342 + (GAAAA)n Simple_repeat Simple_repeat 5 70 0 4 1069 395 279 148 1 chr17 63543779 63543953 -31728698 + B3A SINE B2 3 203 -13 4 1069 228 221 27 93 chr17 63544807 63544882 -31727769 + MIR SINE MIR 95 167 -109 5 1069 21 0 0 0 chr17 63545945 63545966 -31726685 + AT_rich Low_complexity Low_complexity 1 21 0 5 1069 251 204 0 20 chr17 63547316 63547366 -31725285 + ID_B1 SINE B4 176 224 0 5 1069 439 236 133 33 chr17 63548633 63548843 -31723808 + MTEb LTR MaLR 149 379 0 5 1069 306 0 0 0 chr17 63549510 63549544 -31723107 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1069 43 35 0 0 chr17 63550487 63550544 -31722107 + AT_rich Low_complexity Low_complexity 1 57 0 5 1069 976 162 125 5 chr17 63551607 63551799 -31720852 + B3 SINE B2 2 216 0 5 1069 1617 239 149 70 chr17 63552329 63553610 -31719041 + RMER1B Other Other 1 1066 0 5 1069 261 286 93 20 chr17 63554096 63554246 -31718405 + MER33 DNA MER1_type 129 289 -35 5 1069 484 284 129 39 chr17 63554530 63554786 -31717865 + B4A SINE B4 1 279 -13 5 1069 415 194 262 50 chr17 63554825 63554966 -31717685 - RMER1B Other Other -652 414 244 6 1069 423 0 0 0 chr17 63555132 63555179 -31717472 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1069 249 297 40 13 chr17 63557609 63557684 -31714967 - LTR87 LTR ERVL? -2 622 546 6 1069 270 335 58 12 chr17 63558114 63558216 -31714435 - B1F2 SINE Alu -13 107 2 6 1069 297 290 32 0 chr17 63558156 63558218 -31714433 - B4A SINE B4 -144 148 85 6 1069 270 0 0 0 chr17 63561381 63561411 -31711240 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1069 226 222 0 0 chr17 63562573 63562618 -31710033 + L1MD3 LINE L1 6896 6940 -1055 6 1069 21 71 0 0 chr17 63563402 63563444 -31709207 + AT_rich Low_complexity Low_complexity 1 42 0 6 1069 809 273 32 0 chr17 63563454 63563670 -31708981 + ID_B1 SINE B4 2 224 0 6 1069 590 138 0 0 chr17 63563717 63563811 -31708840 - L1_Mm LINE L1 -1935 3948 3855 6 1069 8866 110 16 17 chr17 63563811 63566009 -31706642 + Lx LINE L1 4462 6654 0 7 1069 324 70 0 0 chr17 63567449 63567492 -31705159 + (TATG)n Simple_repeat Simple_repeat 4 46 0 7 1069 23 54 0 0 chr17 63567621 63567658 -31704993 + AT_rich Low_complexity Low_complexity 1 37 0 7 1069 1221 70 0 0 chr17 63567779 63567921 -31704730 + B1_Mus1 SINE Alu 1 142 -6 7 1069 300 70 0 0 chr17 63567923 63567966 -31704685 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 7 1069 234 248 128 10 chr17 63568000 63568102 -31704549 + L1M4 LINE L1 4452 4565 -1581 7 1069 6708 83 79 31 chr17 63568386 63569375 -31703276 + L1_Mus3 LINE L1 5603 6638 0 7 1069 349 164 75 0 chr17 63569385 63569452 -31703199 + RSINE1 SINE B4 59 130 -35 7 1069 432 97 0 0 chr17 63569465 63569527 -31703124 + (CA)n Simple_repeat Simple_repeat 1 62 0 7 1070 228 345 51 68 chr17 63572359 63572536 -31700115 - MER5B DNA MER1_type 0 178 5 7 1070 29 28 0 0 chr17 63573708 63573744 -31698907 + AT_rich Low_complexity Low_complexity 1 36 0 8 1070 1904 145 15 6 chr17 63574963 63575290 -31697361 - L1_Mur2 LINE L1 -936 4941 4612 8 1070 1432 212 42 65 chr17 63575289 63575642 -31697009 + Lx5 LINE L1 6665 7009 -41 8 1070 252 217 21 32 chr17 63577206 63577301 -31695350 + (TA)n Simple_repeat Simple_repeat 1 94 0 8 1070 369 0 0 0 chr17 63578117 63578158 -31694493 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 1070 1262 68 0 0 chr17 63579749 63579897 -31692754 - B1_Mus1 SINE Alu 0 148 1 8 1070 22 56 0 0 chr17 63580639 63580675 -31691976 + AT_rich Low_complexity Low_complexity 1 36 0 8 1070 4717 53 3 2 chr17 63581182 63581766 -31690885 + L1Md_F2 LINE L1 5002 5586 -297 8 1070 8069 56 22 13 chr17 63581766 63582747 -31689904 + L1Md_F2 LINE L1 5587 6576 -6 8 1070 201 39 0 0 chr17 63583065 63583091 -31689560 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 8 1070 450 0 0 0 chr17 63585176 63585226 -31687425 + (TG)n Simple_repeat Simple_repeat 2 51 0 8 1070 375 121 0 0 chr17 63585541 63585599 -31687052 + (TCCC)n Simple_repeat Simple_repeat 1 58 0 9 1070 654 204 0 0 chr17 63585610 63585718 -31686933 - B1_Mur3 SINE Alu -40 109 2 9 1070 441 323 12 58 chr17 63586764 63586935 -31685716 + RSINE1 SINE B4 3 165 0 9 1070 325 243 170 9 chr17 63587525 63587637 -31685014 + HAL1-3A_ME LINE L1 1985 2114 -744 9 1070 290 311 24 79 chr17 63587876 63588040 -31684611 + MLT1D LTR MaLR 351 505 0 9 1070 363 315 69 54 chr17 63588260 63588592 -31684059 - L1ME2z LINE L1 -43 6401 6065 9 1070 660 115 0 0 chr17 63588801 63588905 -31683746 + (TCCC)n Simple_repeat Simple_repeat 3 106 0 9 1070 396 282 26 0 chr17 63588907 63589024 -31683627 - B1F SINE Alu -26 123 4 9 1070 3051 242 42 32 chr17 63592001 63592919 -31679732 + RMER1B Other Other 118 865 -201 9 1070 676 188 0 59 chr17 63592919 63592936 -31679715 + ID_B1 SINE B4 81 224 0 9 1070 1067 66 0 0 chr17 63592936 63593072 -31679579 + B1_Mus1 SINE Alu 13 148 0 1 1070 230 167 14 57 chr17 63593072 63593142 -31679509 + A-rich Low_complexity Low_complexity 6 72 0 1 1070 957 148 58 48 chr17 63593143 63593349 -31679302 + RMER1B Other Other 858 1065 -1 9 1070 626 191 11 3 chr17 63593565 63593697 -31678954 + ORR1D1 LTR MaLR 1 140 -219 1 1070 327 206 14 14 chr17 63593720 63593794 -31678857 - Ricksha DNA MuDR -493 2753 2680 1 1070 231 61 19 58 chr17 63593814 63593852 -31678799 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 1 1070 1337 34 0 0 chr17 63593852 63594000 -31678651 - B1_Mus1 SINE Alu 0 148 1 1 1070 231 61 19 58 chr17 63594000 63594013 -31678638 + (TTTG)n Simple_repeat Simple_repeat 3 15 0 1 1070 438 307 23 30 chr17 63594031 63594162 -31678489 - RSINE1 SINE B4 -31 134 5 1 1070 928 280 100 8 chr17 63594174 63594573 -31678078 - Ricksha DNA MuDR -572 2674 2239 1 1070 2108 248 40 112 chr17 63594845 63595748 -31676903 - RMER17B LTR ERVK -119 839 2 1 1070 299 263 19 112 chr17 63595881 63595988 -31676663 + RSINE1 SINE B4 41 137 -28 1 1070 339 281 101 10 chr17 63596123 63596331 -31676320 - L1MD LINE L1 -1443 4703 4477 1 1070 470 241 6 48 chr17 63596449 63596615 -31676036 - L1MD LINE L1 -1701 4445 4287 1 1070 5703 157 31 36 chr17 63596891 63598133 -31674518 + L1Md_T LINE L1 99 1205 -5411 1 1070 37385 30 0 0 chr17 63598139 63602556 -31670095 + L1Md_T LINE L1 1170 5586 -297 1 1070 8574 54 0 0 chr17 63602556 63603552 -31669099 + L1Md_T LINE L1 5587 6582 0 1 1070 1023 73 88 0 chr17 63604080 63604216 -31668435 - B1_Mus1 SINE Alu 0 148 1 1 1070 21 0 0 0 chr17 63604614 63604635 -31668016 + AT_rich Low_complexity Low_complexity 1 21 0 1 1070 1740 120 112 63 chr17 63605737 63606085 -31666566 + RLTR44A LTR ERVK 41 405 0 1 1070 382 252 58 0 chr17 63606098 63606201 -31666450 + B1F SINE Alu 33 141 -8 1 1070 393 22 0 0 chr17 63607050 63607096 -31665555 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1070 3388 39 18 0 chr17 63607781 63608170 -31664481 + MTA_Mm LTR MaLR 1 396 0 1 1070 180 195 49 0 chr17 63609700 63609741 -31662910 + MIRc SINE MIR 102 144 -124 1 1070 190 29 88 0 chr17 63610736 63610770 -31661881 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 1 1070 239 262 129 45 chr17 63612357 63612489 -31660162 + RMER12 LTR ERVK 718 860 -462 1 1070 21 0 0 0 chr17 63613196 63613217 -31659434 + AT_rich Low_complexity Low_complexity 1 21 0 1 1070 209 93 45 23 chr17 63613319 63613363 -31659288 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 1070 254 273 61 0 chr17 63613579 63613645 -31659006 - ID4 SINE ID -13 70 1 1 1070 327 104 0 0 chr17 63614402 63614450 -31658201 + (A)n Simple_repeat Simple_repeat 1 48 0 1 1070 330 26 0 0 chr17 63615019 63615058 -31657593 + (CTTG)n Simple_repeat Simple_repeat 1 39 0 1 1070 3582 239 73 24 chr17 63615076 63615958 -31656693 + Lx7 LINE L1 6430 7354 -342 1 1070 612 173 22 36 chr17 63616050 63616188 -31656463 + Lx7 LINE L1 7561 7696 0 1 1070 231 114 0 0 chr17 63616580 63616615 -31656036 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1070 1383 202 81 94 chr17 63617135 63617518 -31655133 - ORR1C1 LTR MaLR 0 378 1 1 1070 212 329 0 27 chr17 63618861 63618936 -31653715 + CT-rich Low_complexity Low_complexity 5 77 0 1 1070 1616 240 137 9 chr17 63618962 63619537 -31653114 + Lx9 LINE L1 6989 7637 -7 1 1070 753 216 112 11 chr17 63619694 63619881 -31652770 + B3 SINE B2 4 209 -7 1 1070 918 219 199 0 chr17 63620575 63620826 -31651825 + ORR1D2 LTR MaLR 37 337 -33 1 1070 205 75 50 0 chr17 63620827 63620867 -31651784 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 1 1070 1152 215 120 47 chr17 63621284 63621601 -31651050 + ORR1D1 LTR MaLR 1 340 -34 1 1070 931 204 57 24 chr17 63622971 63623217 -31649434 + Lx7 LINE L1 6804 7057 -639 1 1070 587 253 265 14 chr17 63623328 63623598 -31649053 + MTD LTR MaLR 42 379 -42 1 1070 277 301 52 7 chr17 63623628 63623782 -31648869 + MER57A-int LTR ERV1 2103 2263 -3924 1 1070 1203 200 212 86 chr17 63624232 63624637 -31648014 + MT2A LTR ERVL 1 456 -77 1 1070 525 71 0 0 chr17 63624655 63624725 -31647926 + (TG)n Simple_repeat Simple_repeat 2 71 0 1 1070 357 24 0 0 chr17 63625962 63626004 -31646647 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1070 25 0 0 0 chr17 63631710 63631735 -31640916 + AT_rich Low_complexity Low_complexity 1 25 0 1 1070 233 277 0 0 chr17 63633050 63633097 -31639554 + PB1D7 SINE Alu 9 55 -65 1 1070 23 0 0 0 chr17 63633427 63633450 -31639201 + AT_rich Low_complexity Low_complexity 1 23 0 1 1070 267 140 0 0 chr17 63635315 63635365 -31637286 + (CAGAGA)n Simple_repeat Simple_repeat 5 54 0 1 1070 339 25 0 0 chr17 63635392 63635432 -31637219 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1070 1321 97 37 11 chr17 63635664 63635852 -31636799 - B2_Mm2 SINE B2 0 195 3 1 1070 235 299 192 45 chr17 63636758 63637003 -31635648 - Tigger10 DNA Tigger -988 855 575 1 1070 255 345 52 0 chr17 63638905 63639021 -31633630 - MIR SINE MIR -134 128 7 1 1070 395 238 139 0 chr17 63639186 63639308 -31633343 - BC1_Mm scRNA scRNA -13 139 1 1 1070 295 311 152 6 chr17 63639861 63640039 -31632612 + L2 LINE L2 2561 2764 -655 1 1070 23 0 0 0 chr17 63643172 63643195 -31629456 + AT_rich Low_complexity Low_complexity 1 23 0 1 1070 509 198 0 8 chr17 63643734 63643851 -31628800 + A-rich Low_complexity Low_complexity 2 117 0 1 1070 372 94 0 0 chr17 63643848 63643901 -31628750 + (GGGA)n Simple_repeat Simple_repeat 2 54 0 1 1070 234 0 0 0 chr17 63646607 63646633 -31626018 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1070 2010 142 89 63 chr17 63646641 63647100 -31625551 + RMER6C LTR ERVK 1 471 -219 1 1070 215 178 22 0 chr17 63647101 63647146 -31625505 - B4 SINE B4 -245 47 2 1 1070 5469 32 12 1 chr17 63647146 63647793 -31624858 + L1Md_F3 LINE L1 5909 6562 -22 1 1070 288 0 0 0 chr17 63647793 63647825 -31624826 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 1070 1408 136 9 4 chr17 63647825 63648054 -31624597 + RMER6C LTR ERVK 461 690 0 1 1070 1172 149 16 5 chr17 63648240 63648429 -31624222 + RMER20A LTR ERVK 3 193 -323 1 1070 277 261 0 42 chr17 63652076 63652148 -31620503 + ID4_ SINE ID 5 73 -10 1 1070 395 275 82 58 chr17 63652847 63653054 -31619597 + RLTR15 LTR ERVK 45 265 -94 1 1070 5012 163 26 90 chr17 63653054 63654017 -31618634 - RMER19B LTR ERVK 0 902 2 1 1070 395 275 82 58 chr17 63654017 63654102 -31618549 + RLTR15 LTR ERVK 266 344 -15 1 1070 310 291 19 0 chr17 63654130 63654233 -31618418 - PB1D10 SINE Alu -12 105 1 1 1070 291 157 0 0 chr17 63654594 63654645 -31618006 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 1070 479 331 16 6 chr17 63654648 63654830 -31617821 - MIR SINE MIR -76 186 3 1 1070 227 157 20 0 chr17 63657606 63657657 -31614994 + GA-rich Low_complexity Low_complexity 3 54 0 1 1070 300 53 0 0 chr17 63658591 63658629 -31614022 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1070 207 0 0 0 chr17 63659235 63659258 -31613393 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1070 480 35 0 0 chr17 63660767 63660825 -31611826 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1070 1535 42 0 0 chr17 63660867 63661056 -31611595 + MTB LTR MaLR 212 400 0 1 1070 522 194 17 163 chr17 63662275 63662447 -31610204 - Lx9 LINE L1 -382 7262 7116 1 1070 513 263 195 4 chr17 63662448 63662715 -31609936 + Lx9 LINE L1 7325 7642 -2 1 1070 399 311 9 9 chr17 63662723 63662830 -31609821 + B4A SINE B4 1 107 -185 1 1070 2393 145 48 2 chr17 63662907 63663300 -31609351 - MTC LTR MaLR -1 420 10 1 1070 207 0 0 0 chr17 63663428 63663451 -31609200 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 1 1070 189 107 0 0 chr17 63665878 63665906 -31606745 + (TGGA)n Simple_repeat Simple_repeat 3 30 0 1 1070 216 0 0 0 chr17 63667453 63667477 -31605174 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1 1070 333 317 0 0 chr17 63668311 63668415 -31604236 + (CAGG)n Simple_repeat Simple_repeat 3 106 0 1 1070 1044 83 0 0 chr17 63668964 63669108 -31603543 + (CA)n Simple_repeat Simple_repeat 2 145 0 1 1070 24 67 0 0 chr17 63669181 63669226 -31603425 + AT_rich Low_complexity Low_complexity 1 45 0 1 1070 254 50 25 0 chr17 63670416 63670456 -31602195 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1 1070 203 238 0 0 chr17 63672067 63672109 -31600542 + GA-rich Low_complexity Low_complexity 1 42 0 1 1070 231 253 0 0 chr17 63672191 63672270 -31600381 + (CA)n Simple_repeat Simple_repeat 2 80 0 1 1070 1260 109 35 0 chr17 63674565 63674739 -31597912 - B2_Mm2 SINE B2 -14 181 2 1 1070 531 0 0 0 chr17 63675145 63675204 -31597447 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1070 440 282 0 9 chr17 63675534 63675645 -31597006 + ID_B1 SINE B4 108 217 -7 1 1070 1146 56 28 21 chr17 63677078 63677223 -31595428 + B1_Mus2 SINE Alu 2 147 0 1 1070 1603 155 165 43 chr17 63677373 63677743 -31594908 - MTC LTR MaLR -6 415 1 1 1070 1362 81 36 42 chr17 63678055 63678248 -31594403 + B2_Mm1t SINE B2 2 193 0 1 1070 28 0 0 0 chr17 63678277 63678305 -31594346 + AT_rich Low_complexity Low_complexity 1 28 0 1 1070 21 0 0 0 chr17 63680193 63680214 -31592437 + AT_rich Low_complexity Low_complexity 1 21 0 1 1070 434 302 129 24 chr17 63681971 63682219 -31590432 + MLT1A0 LTR MaLR 92 365 0 1 1070 222 62 0 0 chr17 63683237 63683269 -31589382 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1070 800 129 24 0 chr17 63683470 63683594 -31589057 - B1_Mus1 SINE Alu -20 128 2 1 1070 481 193 0 136 chr17 63683483 63683615 -31589036 - MT2B LTR ERVL -337 264 151 1 1070 713 77 19 0 chr17 63683704 63683808 -31588843 + (GAAA)n Simple_repeat Simple_repeat 3 108 0 1 1070 247 319 21 21 chr17 63683918 63684011 -31588640 + L1M5 LINE L1 5679 5771 -391 1 1070 207 0 0 0 chr17 63685323 63685346 -31587305 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1 1070 202 240 0 39 chr17 63686828 63686880 -31585771 + G-rich Low_complexity Low_complexity 1 50 0 1 1070 21 57 0 0 chr17 63688587 63688622 -31584029 + AT_rich Low_complexity Low_complexity 1 35 0 1 1070 502 208 81 86 chr17 63688783 63688957 -31583694 - B4A SINE B4 -118 174 2 2 1070 200 280 113 60 chr17 63689856 63689989 -31582662 + MIRb SINE MIR 20 159 -109 2 1070 791 150 125 6 chr17 63690336 63690504 -31582147 - URR1A DNA MER1_type 0 226 39 2 1070 186 43 0 0 chr17 63691000 63691023 -31581628 + (TGGG)n Simple_repeat Simple_repeat 2 24 0 2 1070 1061 212 16 0 chr17 63691107 63691296 -31581355 - B3 SINE B2 -24 192 1 2 1070 4807 152 42 39 chr17 63694540 63695489 -31577162 - RMER17B LTR ERVK -5 953 2 2 1070 1035 306 28 14 chr17 63695500 63695782 -31576869 + B4A SINE B4 6 291 -1 2 1070 1230 172 169 53 chr17 63695971 63696272 -31576379 + ORR1D1 LTR MaLR 1 336 -38 2 1070 312 306 27 27 chr17 63698142 63698253 -31574398 - PB1 SINE Alu -11 116 6 2 1070 1245 84 11 11 chr17 63698262 63698443 -31574208 - B2_Mm2 SINE B2 -7 188 8 2 1070 274 268 14 0 chr17 63699214 63699285 -31573366 + ID4 SINE ID 3 74 -9 2 1070 209 351 0 25 chr17 63699429 63699508 -31573143 - L3 LINE CR1 -200 4289 4213 2 1070 36 94 0 0 chr17 63699599 63699705 -31572946 + AT_rich Low_complexity Low_complexity 1 106 0 2 1070 338 281 230 29 chr17 63699711 63699874 -31572777 - B3A SINE B2 -30 186 2 2 1071 248 346 13 0 chr17 63701313 63701391 -31571260 + ID4 SINE ID 2 80 -3 2 1071 882 163 168 5 chr17 63701627 63701812 -31570839 - URR1A DNA MER1_type 0 226 12 2 1071 321 26 0 0 chr17 63701812 63701850 -31570801 + (GA)n Simple_repeat Simple_repeat 1 38 0 2 1071 21 71 0 0 chr17 63703222 63703264 -31569387 + AT_rich Low_complexity Low_complexity 1 42 0 2 1071 434 227 165 6 chr17 63703675 63703839 -31568812 + L1M2 LINE L1 5144 5333 -810 2 1071 1786 173 201 3 chr17 63703995 63704384 -31568267 + RMER4A LTR ERVK 1 466 0 2 1071 334 164 0 47 chr17 63704386 63704450 -31568201 + RMER4A LTR ERVK 308 368 -98 2 1071 353 221 64 104 chr17 63704841 63705072 -31567579 + L1MA6 LINE L1 6038 6281 -19 2 1071 28 29 0 0 chr17 63705222 63705257 -31567394 + AT_rich Low_complexity Low_complexity 1 35 0 2 1071 296 282 89 83 chr17 63707136 63707336 -31565315 + MLT1E2 LTR MaLR 305 490 -137 2 1071 288 0 0 0 chr17 63707336 63707368 -31565283 + (CAGA)n Simple_repeat Simple_repeat 4 35 0 2 1071 292 333 53 43 chr17 63707368 63707460 -31565191 + MLT1E2 LTR MaLR 411 504 -1 2 1071 435 191 12 0 chr17 63708297 63708381 -31564270 + PB1D9 SINE Alu 24 108 -12 2 1071 582 118 0 0 chr17 63709344 63709437 -31563214 + (GA)n Simple_repeat Simple_repeat 2 94 0 2 1071 442 165 10 20 chr17 63710607 63710706 -31561945 + GA-rich Low_complexity Low_complexity 4 101 0 2 1071 2689 232 69 32 chr17 63711328 63711978 -31560673 + RMER19A LTR ERVK 1 677 -60 2 1071 3110 63 36 8 chr17 63711978 63712363 -31560288 + MTA_Mm LTR MaLR 1 396 0 2 1071 2689 232 69 32 chr17 63712363 63712423 -31560228 + RMER19A LTR ERVK 678 737 0 2 1071 1529 226 115 0 chr17 63712680 63713079 -31559572 + Lx9 LINE L1 6943 7387 -257 2 1071 3374 170 30 29 chr17 63714020 63714697 -31557954 + RMER1A Other Other 257 890 -140 2 1071 180 0 0 0 chr17 63715363 63715383 -31557268 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1071 24 0 0 0 chr17 63716270 63716294 -31556357 + AT_rich Low_complexity Low_complexity 1 24 0 2 1071 834 292 62 21 chr17 63717383 63717722 -31554929 - Lx9 LINE L1 -156 7488 7136 2 1071 33 43 0 0 chr17 63721601 63721648 -31551003 + AT_rich Low_complexity Low_complexity 1 47 0 2 1071 710 277 47 8 chr17 63722096 63722354 -31550297 - L1MA8 LINE L1 -260 6031 5764 2 1071 22 0 0 0 chr17 63722360 63722382 -31550269 + AT_rich Low_complexity Low_complexity 1 22 0 2 1071 288 0 0 0 chr17 63722461 63722493 -31550158 + (TC)n Simple_repeat Simple_repeat 1 32 0 2 1071 423 106 0 0 chr17 63722493 63722558 -31550093 + (CA)n Simple_repeat Simple_repeat 1 66 0 2 1071 5377 236 52 39 chr17 63722601 63723669 -31548982 - Lx9 LINE L1 -427 7217 6126 2 1071 3445 38 5 5 chr17 63723669 63724063 -31548588 + MTA_Mm LTR MaLR 3 396 0 2 1071 11510 233 69 82 chr17 63724063 63728019 -31544632 - Lx9 LINE L1 -1519 6125 2240 2 1071 665 142 86 36 chr17 63728019 63728158 -31544493 + B1_Mus2 SINE Alu 1 146 -1 2 1071 11510 234 66 89 chr17 63728158 63729323 -31543328 - Lx9 LINE L1 -3608 2239 1082 2 1071 1227 54 0 26 chr17 63729323 63729337 -31543314 - B1_Mus1 SINE Alu 0 148 138 2 1071 429 20 0 0 chr17 63729337 63729387 -31543264 + (TTG)n Simple_repeat Simple_repeat 2 51 0 2 1071 1227 54 0 26 chr17 63729387 63729524 -31543127 - B1_Mus1 SINE Alu -11 137 1 2 1071 1139 244 43 117 chr17 63729524 63729690 -31542961 - Lx9 LINE L1 -6527 1081 925 2 1071 696 232 132 27 chr17 63729868 63730159 -31542492 - L1MA8 LINE L1 -747 5544 5217 2 1071 776 175 66 0 chr17 63730169 63730306 -31542345 - B1_Mus2 SINE Alu -1 146 1 2 1071 241 347 0 10 chr17 63730426 63730522 -31542129 - L1M5 LINE L1 -2576 3570 3476 2 1071 1641 40 10 10 chr17 63730523 63730727 -31541924 - L1_Mus2 LINE L1 -1 6565 6362 2 1071 250 281 33 3 chr17 63730763 63730852 -31541799 - AluF_3 SINE Alu -101 210 141 2 1071 22 0 0 0 chr17 63731573 63731595 -31541056 + AT_rich Low_complexity Low_complexity 1 22 0 2 1071 216 188 0 0 chr17 63731645 63731693 -31540958 + T-rich Low_complexity Low_complexity 1 48 0 2 1071 1205 82 0 0 chr17 63731693 63731840 -31540811 - B1_Mus2 SINE Alu 0 147 1 2 1071 406 75 30 0 chr17 63732862 63732929 -31539722 + (CCA)n Simple_repeat Simple_repeat 1 69 0 2 1071 1297 108 5 5 chr17 63733533 63733728 -31538923 - B2_Mm2 SINE B2 0 195 1 2 1071 286 281 44 11 chr17 63734062 63734152 -31538499 + B1F1 SINE Alu 17 109 -40 2 1071 514 257 122 29 chr17 63734829 63735043 -31537608 + MLT2B1 LTR ERVL 328 567 0 2 1071 1347 194 32 0 chr17 63735300 63735553 -31537098 + ORR1B1 LTR MaLR 1 261 -133 2 1071 3042 134 88 17 chr17 63735561 63736093 -31536558 + MTA_Mm-int LTR MaLR 528 1097 -1 2 1071 3291 58 5 8 chr17 63736094 63736491 -31536160 + MTA_Mm LTR MaLR 1 396 0 2 1071 743 167 83 0 chr17 63736491 63736635 -31536016 + ORR1B1 LTR MaLR 212 367 0 2 1071 299 255 68 47 chr17 63738500 63738648 -31534003 - L1ME1 LINE L1 -196 5983 5833 2 1071 227 238 0 0 chr17 63738882 63738945 -31533706 - L1ME1 LINE L1 -755 5689 5627 2 1071 255 321 28 19 chr17 63739314 63739422 -31533229 - L1ME1 LINE L1 -1134 5012 4904 2 1071 1059 259 73 17 chr17 63741037 63741339 -31531312 - ORR1D2 LTR MaLR -50 320 2 2 1071 253 297 95 24 chr17 63741784 63741910 -31530741 + L2 LINE L2 2783 2918 -501 2 1071 471 18 0 0 chr17 63741910 63741966 -31530685 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 1071 253 297 95 24 chr17 63741966 63742008 -31530643 + L2 LINE L2 2919 2963 -456 2 1071 330 132 0 0 chr17 63742811 63742864 -31529787 + (GGA)n Simple_repeat Simple_repeat 2 54 0 2 1071 713 100 0 0 chr17 63743206 63743306 -31529345 + L1VL1 LINE L1 2 101 -6321 2 1071 4614 69 40 0 chr17 63743303 63743567 -31529084 + L1Md_F2 LINE L1 4954 5241 -642 2 1071 459 0 0 0 chr17 63743567 63743618 -31529033 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1071 4614 69 40 0 chr17 63743618 63743960 -31528691 + L1Md_F2 LINE L1 5242 5583 -300 2 1071 7680 75 32 2 chr17 63743963 63744927 -31527724 + L1Md_F2 LINE L1 5588 6580 -2 2 1071 908 125 0 0 chr17 63746184 63746312 -31526339 - B1_Mur4 SINE Alu -11 139 12 2 1071 342 268 0 118 chr17 63746208 63746335 -31526316 - MT2B LTR ERVL -337 264 153 2 1071 276 282 14 0 chr17 63746482 63746553 -31526098 + MIR SINE MIR 33 104 -158 2 1071 234 62 0 0 chr17 63746774 63746806 -31525845 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1071 194 62 31 0 chr17 63748407 63748439 -31524212 + (TTTTTG)n Simple_repeat Simple_repeat 6 38 0 2 1071 1090 102 7 0 chr17 63748440 63748587 -31524064 - B1_Mus1 SINE Alu 0 148 1 2 1071 304 187 48 72 chr17 63748686 63748790 -31523861 - B1F1 SINE Alu -9 111 10 2 1071 180 152 0 0 chr17 63749898 63749931 -31522720 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1071 1157 246 116 11 chr17 63750209 63750579 -31522072 + Lx7 LINE L1 6761 7169 -527 2 1071 433 228 0 98 chr17 63750781 63750893 -31521758 + MT2B LTR ERVL 157 257 -344 2 1071 1079 72 0 0 chr17 63750799 63750938 -31521713 + B1_Mus2 SINE Alu 9 147 0 2 1071 588 121 0 0 chr17 63750947 63751038 -31521613 + (GA)n Simple_repeat Simple_repeat 2 92 0 2 1071 1271 78 0 11 chr17 63751038 63751220 -31521431 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2 1071 642 315 109 36 chr17 63751221 63751337 -31521314 + L1MDa LINE L1 1265 1373 -5260 2 1071 1037 147 140 15 chr17 63751337 63751537 -31521114 - URR1B DNA MER1_type 0 225 1 2 1071 642 315 109 36 chr17 63751537 63752134 -31520517 + L1MDa LINE L1 1374 2030 -4603 2 1071 189 0 0 0 chr17 63754244 63754265 -31518386 + (CAA)n Simple_repeat Simple_repeat 1 21 0 2 1071 333 0 0 0 chr17 63756695 63756732 -31515919 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2 1071 195 42 0 0 chr17 63756792 63756816 -31515835 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 1071 297 325 35 71 chr17 63756891 63757060 -31515591 - RSINE1 SINE B4 0 165 3 2 1071 1562 65 16 0 chr17 63757731 63757917 -31514734 + B2_Mm2 SINE B2 2 190 -5 2 1071 607 238 13 7 chr17 63758152 63758304 -31514347 + L1VL1 LINE L1 174 326 -6096 2 1071 2887 39 21 0 chr17 63758306 63758640 -31514011 + L1Md_F2 LINE L1 6223 6563 -19 2 1071 378 310 62 36 chr17 63760259 63760453 -31512198 - HAL1 LINE L1 -6 2501 2303 2 1071 3225 166 138 23 chr17 63761287 63761947 -31510704 + RMER19A LTR ERVK 2 737 0 2 1071 991 168 73 104 chr17 63762269 63762489 -31510162 - ORR1B2 LTR MaLR -152 215 3 2 1071 24 77 0 0 chr17 63762607 63762659 -31509992 + AT_rich Low_complexity Low_complexity 1 52 0 2 1071 705 106 0 0 chr17 63762958 63763062 -31509589 + (GGAAA)n Simple_repeat Simple_repeat 5 108 0 2 1071 547 43 0 0 chr17 63764305 63764374 -31508277 + B1_Mm SINE Alu 79 147 0 2 1071 918 163 14 7 chr17 63764400 63764548 -31508103 + B1_Mur4 SINE Alu 1 149 -1 2 1071 291 372 72 20 chr17 63764967 63765162 -31507489 - MER44D DNA MER2_type -499 206 2 2 1071 1217 71 136 0 chr17 63765286 63765455 -31507196 + B2_Mm2 SINE B2 2 193 -2 2 1071 22 94 0 0 chr17 63765503 63765567 -31507084 + AT_rich Low_complexity Low_complexity 1 64 0 2 1071 221 262 16 16 chr17 63766259 63766387 -31506264 + (TG)n Simple_repeat Simple_repeat 1 128 0 2 1071 1250 166 54 131 chr17 63766504 63766736 -31505915 - Lx6 LINE L1 -814 6646 6421 2 1071 1218 61 7 13 chr17 63766736 63766885 -31505766 - B1_Mus1 SINE Alu 0 148 1 3 1071 1250 166 54 131 chr17 63766885 63766950 -31505701 - Lx6 LINE L1 -1040 6420 6372 2 1071 2519 187 55 8 chr17 63766964 63767501 -31505150 - Lx6 LINE L1 -1908 5788 5222 2 1071 251 242 0 15 chr17 63768067 63768134 -31504517 - MER34 LTR ERV1 -53 489 424 3 1071 260 256 277 74 chr17 63768163 63768343 -31504308 - Lx8 LINE L1 -1 7472 7257 3 1071 900 251 35 10 chr17 63769265 63769466 -31503185 + B3 SINE B2 5 210 -6 3 1071 316 311 97 19 chr17 63769639 63769793 -31502858 - MIR SINE MIR -75 187 22 3 1071 1372 101 6 0 chr17 63771528 63771706 -31500945 + B2_Mm2 SINE B2 2 180 -15 3 1071 27 29 0 0 chr17 63771758 63771792 -31500859 + AT_rich Low_complexity Low_complexity 1 34 0 3 1071 657 146 105 8 chr17 63771984 63772108 -31500543 + B1_Mur1 SINE Alu 1 136 -13 3 1071 309 320 0 30 chr17 63772568 63772903 -31499748 + G-rich Low_complexity Low_complexity 1 324 0 3 1071 32 26 0 0 chr17 63772908 63772947 -31499704 + AT_rich Low_complexity Low_complexity 1 39 0 3 1071 770 239 10 179 chr17 63772964 63773255 -31499396 + MT2A LTR ERVL 3 244 -289 3 1071 293 237 174 9 chr17 63773910 63774025 -31498626 - L1MA4 LINE L1 -376 5924 5791 3 1071 254 284 103 62 chr17 63774383 63774578 -31498073 + L1M2c LINE L1 1954 2156 -5012 3 1071 15115 9 0 0 chr17 63774731 63776404 -31496247 + L1Md_A LINE L1 3914 5586 -297 3 1071 9516 8 0 0 chr17 63776404 63777399 -31495252 + L1Md_A LINE L1 5587 6581 -1 3 1071 180 0 0 0 chr17 63777411 63777431 -31495220 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1071 243 61 0 0 chr17 63777475 63777508 -31495143 + (A)n Simple_repeat Simple_repeat 1 33 0 3 1071 264 343 36 36 chr17 63777553 63777801 -31494850 + L1M2c LINE L1 2429 2676 -4492 3 1071 312 350 57 17 chr17 63777865 63778042 -31494609 + L1M4c LINE L1 1578 1761 -4623 3 1071 353 264 29 101 chr17 63778190 63778329 -31494322 - B4A SINE B4 0 292 164 3 1071 288 295 54 100 chr17 63778469 63778748 -31493903 + L1M4c LINE L1 2364 2629 -3750 3 1071 3207 46 18 0 chr17 63778758 63779147 -31493504 + MTA_Mm LTR MaLR 1 396 0 3 1071 195 114 0 0 chr17 63779737 63779772 -31492879 + (TCCG)n Simple_repeat Simple_repeat 4 38 0 3 1071 774 268 100 3 chr17 63779772 63780072 -31492579 + MTEa LTR MaLR 51 379 0 3 1071 283 297 90 42 chr17 63780077 63780357 -31492294 + L1M4c LINE L1 2804 3078 -3301 3 1071 1155 41 20 20 chr17 63780357 63780505 -31492146 - B1_Mus1 SINE Alu 0 148 1 3 1071 269 308 74 110 chr17 63780505 63780548 -31492103 + L1M4c LINE L1 3079 3103 -3276 3 1071 261 0 0 0 chr17 63780548 63780577 -31492074 + (TA)n Simple_repeat Simple_repeat 1 29 0 3 1071 243 0 0 0 chr17 63780577 63780603 -31492048 + (GA)n Simple_repeat Simple_repeat 2 28 0 3 1071 269 308 74 110 chr17 63780603 63780858 -31491793 + L1M4c LINE L1 3104 3362 -3017 3 1071 227 221 15 0 chr17 63780945 63781013 -31491638 + Lx9 LINE L1 7553 7621 -23 3 1071 274 269 120 49 chr17 63781725 63781909 -31490742 - MIR SINE MIR -43 219 23 3 1071 627 217 7 7 chr17 63782301 63782440 -31490211 + B1_Mur1 SINE Alu 2 140 -9 3 1071 310 320 10 0 chr17 63782453 63782550 -31490101 + G-rich Low_complexity Low_complexity 1 98 0 3 1071 33 25 0 0 chr17 63783143 63783183 -31489468 + AT_rich Low_complexity Low_complexity 1 40 0 3 1071 23 0 0 0 chr17 63783304 63783327 -31489324 + AT_rich Low_complexity Low_complexity 1 23 0 3 1071 186 43 0 0 chr17 63784219 63784242 -31488409 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 1071 21 0 0 0 chr17 63784983 63785004 -31487647 + AT_rich Low_complexity Low_complexity 1 21 0 3 1071 258 32 0 0 chr17 63787056 63787087 -31485564 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 1071 1403 45 79 0 chr17 63787505 63787664 -31484987 + B2_Mm1t SINE B2 2 160 -33 3 1071 495 0 0 0 chr17 63787664 63787719 -31484932 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 3 1071 1403 45 79 0 chr17 63787719 63787737 -31484914 + B2_Mm1t SINE B2 161 191 -2 3 1071 276 276 40 20 chr17 63788990 63789015 -31483636 - BC1_Mm scRNA scRNA -45 107 6 3 1071 334 253 27 0 chr17 63789015 63789090 -31483561 - ID SINE ID -142 82 6 3 1071 216 0 0 0 chr17 63789433 63789457 -31483194 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 3 1071 1160 88 0 0 chr17 63790164 63790312 -31482339 + B1_Mus1 SINE Alu 1 148 0 3 1071 203 246 52 17 chr17 63791085 63791143 -31481508 + MIRb SINE MIR 113 172 -96 3 1071 1719 189 203 7 chr17 63791706 63792211 -31480440 + RMER1B Other Other 492 1066 0 3 1071 396 362 123 18 chr17 63792611 63792887 -31479764 - MER2 DNA MER2_type -31 314 10 3 1071 823 128 240 0 chr17 63793752 63793931 -31478720 + URR1A DNA MER1_type 5 226 0 3 1071 186 43 0 0 chr17 63794684 63794707 -31477944 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 1071 215 299 104 52 chr17 63795244 63795378 -31477273 + B1F1 SINE Alu 2 142 -7 3 1071 300 333 65 0 chr17 63795261 63795384 -31477267 + ID_B1 SINE B4 93 223 -1 3 1071 23 0 0 0 chr17 63795455 63795478 -31477173 + AT_rich Low_complexity Low_complexity 1 23 0 3 1071 29 47 0 0 chr17 63795550 63795593 -31477058 + AT_rich Low_complexity Low_complexity 1 43 0 3 1071 21 0 0 0 chr17 63797976 63797997 -31474654 + AT_rich Low_complexity Low_complexity 1 21 0 3 1071 247 219 0 7 chr17 63799297 63799349 -31473302 - B1F1 SINE Alu -7 142 93 3 1071 26 0 0 0 chr17 63799842 63799868 -31472783 + AT_rich Low_complexity Low_complexity 1 26 0 3 1071 207 0 0 0 chr17 63801219 63801242 -31471409 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 1071 1287 118 52 0 chr17 63801655 63801866 -31470785 - Lx2 LINE L1 0 6997 6776 3 1071 26 50 0 0 chr17 63802100 63802140 -31470511 + AT_rich Low_complexity Low_complexity 1 40 0 3 1071 234 306 54 20 chr17 63803005 63803152 -31469499 + L1MC LINE L1 5526 5677 -2205 3 1071 214 299 0 49 chr17 63803395 63803476 -31469175 + GA-rich Low_complexity Low_complexity 4 80 0 3 1071 1005 128 0 0 chr17 63803493 63803673 -31468978 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 1071 459 367 50 25 chr17 63803685 63803962 -31468689 + L1M4 LINE L1 4274 4557 -1589 3 1071 413 234 49 54 chr17 63803965 63804168 -31468483 + L1M2 LINE L1 5159 5360 -783 3 1071 565 244 0 0 chr17 63804169 63804284 -31468367 + PB1D9 SINE Alu 1 115 -5 3 1071 350 173 13 0 chr17 63804294 63804369 -31468282 + GA-rich Low_complexity Low_complexity 3 78 0 3 1071 241 300 14 0 chr17 63804881 63804951 -31467700 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 1071 1228 34 7 0 chr17 63805993 63806139 -31466512 + B1_Mm SINE Alu 1 147 0 3 1071 1197 98 23 11 chr17 63806278 63806454 -31466197 + B2_Mm2 SINE B2 1 178 -17 3 1071 1043 144 6 6 chr17 63806494 63806655 -31465996 + B2_Mm1t SINE B2 1 161 -32 3 1071 1884 102 123 0 chr17 63807588 63807873 -31464778 + ORR1A2 LTR MaLR 5 324 -3 3 1071 694 169 39 0 chr17 63808312 63808442 -31464209 + B1_Mur4 SINE Alu 4 138 -12 3 1071 279 0 0 0 chr17 63808442 63808473 -31464178 + (TAA)n Simple_repeat Simple_repeat 3 33 0 3 1071 679 223 40 30 chr17 63811238 63811437 -31461214 + B3 SINE B2 1 201 -15 3 1071 305 317 64 15 chr17 63811481 63811683 -31460968 - L1_Mur3 LINE L1 -450 5430 5219 3 1071 558 306 31 22 chr17 63811661 63812005 -31460646 - L1M2 LINE L1 -1031 5112 4774 3 1071 2279 167 12 10 chr17 63812146 63812564 -31460087 + MTC LTR MaLR 3 421 0 3 1071 578 313 135 57 chr17 63812570 63813365 -31459286 - L1M2 LINE L1 -1555 4588 3732 3 1071 375 272 113 11 chr17 63813364 63813590 -31459061 + L1MA4A LINE L1 5619 5931 -372 3 1071 33 43 0 0 chr17 63814153 63814200 -31458451 + AT_rich Low_complexity Low_complexity 1 47 0 3 1071 203 173 19 0 chr17 63816625 63816677 -31455974 + CT-rich Low_complexity Low_complexity 3 55 0 3 1071 393 248 13 32 chr17 63816700 63816831 -31455820 + MLT1A1 LTR MaLR 237 408 0 3 1071 214 348 91 55 chr17 63818220 63818439 -31454212 - MIRb SINE MIR -23 245 19 3 1071 1172 68 0 0 chr17 63818642 63818788 -31453863 - B1_Mus2 SINE Alu 0 147 2 3 1071 3183 214 117 14 chr17 63818845 63819766 -31452885 + Lx9 LINE L1 6606 7621 -23 3 1071 368 288 150 24 chr17 63819983 63820229 -31452422 + L1MB7 LINE L1 5834 6110 -74 3 1071 186 118 0 0 chr17 63821604 63821638 -31451013 + (TC)n Simple_repeat Simple_repeat 2 35 0 3 1071 766 297 52 32 chr17 63821638 63821687 -31450964 - Lx8 LINE L1 -1500 5973 5926 3 1071 183 42 0 0 chr17 63821687 63821711 -31450940 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 1071 1092 309 134 24 chr17 63821711 63823582 -31449069 - Lx8 LINE L1 -1548 5925 3830 3 1071 192 179 0 0 chr17 63824010 63824049 -31448602 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 1071 495 308 114 105 chr17 63824464 63824690 -31447961 + HAL1 LINE L1 1328 1590 -917 3 1071 2936 47 24 5 chr17 63824690 63825073 -31447578 + L1_Mus2 LINE L1 6177 6566 0 3 1071 495 308 114 105 chr17 63825073 63825390 -31447261 + HAL1 LINE L1 1591 1876 -631 3 1071 1894 196 52 17 chr17 63826857 63827263 -31445388 - MTC LTR MaLR -1 420 1 3 1071 745 296 147 71 chr17 63827397 63827753 -31444898 + L1MCa LINE L1 44 479 -6029 3 1071 352 165 230 30 chr17 63827753 63827853 -31444798 - PB1D9 SINE Alu 0 120 1 3 1071 745 296 147 71 chr17 63827853 63828535 -31444116 + L1MCa LINE L1 480 1161 -5347 3 1071 254 311 68 0 chr17 63828728 63828860 -31443791 + L1MCa LINE L1 1421 1561 -4947 3 1071 240 227 53 13 chr17 63828882 63828958 -31443693 + L1MCa LINE L1 2342 2420 -4088 3 1071 355 313 80 7 chr17 63829109 63829260 -31443391 + L1MCa LINE L1 2558 2719 -3602 3 1071 537 314 91 63 chr17 63829294 63829479 -31443172 + L1MC1 LINE L1 5670 5848 -485 3 1071 1405 58 15 20 chr17 63829479 63829674 -31442977 + B2_Mm2 SINE B2 2 195 0 3 1071 537 314 91 63 chr17 63829674 63829838 -31442813 + L1MC1 LINE L1 5849 6029 -304 3 1071 338 327 28 19 chr17 63830012 63830227 -31442424 - L1MB4 LINE L1 -3180 3567 3351 3 1071 738 224 5 97 chr17 63830523 63830740 -31441911 + B3A SINE B2 2 198 0 3 1071 267 244 11 22 chr17 63830817 63830909 -31441742 - L1MB4 LINE L1 -5763 844 754 3 1071 339 239 33 0 chr17 63831400 63831492 -31441159 - L1MB4 LINE L1 -6248 359 265 3 1071 264 261 22 11 chr17 63831650 63831739 -31440912 - B1F2 SINE Alu -28 121 32 3 1071 242 300 43 0 chr17 63831898 63831968 -31440683 - ID4 SINE ID -8 75 3 3 133 23 33 0 0 chr17 63832035 63832065 -31440586 + AT_rich Low_complexity Low_complexity 1 30 0 3 1072 519 211 236 0 chr17 63832443 63832566 -31440085 + RSINE1 SINE B4 8 159 -6 3 1072 265 293 24 0 chr17 63832590 63832672 -31439979 + RSINE1 SINE B4 4 87 -78 3 1072 22 35 0 0 chr17 63832712 63832741 -31439910 + AT_rich Low_complexity Low_complexity 1 29 0 3 1072 1068 97 0 0 chr17 63832841 63832986 -31439665 + B1_Mm SINE Alu 1 145 -2 3 1072 240 111 0 0 chr17 63832994 63833030 -31439621 + (GA)n Simple_repeat Simple_repeat 2 37 0 3 1072 225 237 0 0 chr17 63833522 63833581 -31439070 + (TA)n Simple_repeat Simple_repeat 2 60 0 4 1072 3458 25 5 0 chr17 63834118 63834512 -31438139 + MTA_Mm LTR MaLR 1 396 0 4 1072 8329 60 15 6 chr17 63834512 63835600 -31437051 + MTA_Mm-int LTR MaLR 1 1098 0 4 1072 3324 41 10 0 chr17 63835600 63835992 -31436659 + MTA_Mm LTR MaLR 1 396 0 4 1072 1206 54 0 0 chr17 63836515 63836662 -31435989 + B1_Mus1 SINE Alu 2 148 0 4 1072 210 71 0 0 chr17 63836662 63836690 -31435961 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1072 201 233 0 0 chr17 63839933 63839976 -31432675 + (CGTG)n Simple_repeat Simple_repeat 1 43 0 4 1072 306 0 0 0 chr17 63840468 63840502 -31432149 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1072 880 216 49 87 chr17 63841037 63841301 -31431350 + Lx4B LINE L1 6802 7055 -3 4 1072 318 275 83 14 chr17 63841858 63842002 -31430649 + MIR SINE MIR 96 249 -13 4 1072 364 206 81 54 chr17 63843044 63843193 -31429458 - L1M5 LINE L1 -3122 3024 2872 4 1072 216 0 0 0 chr17 63843722 63843746 -31428905 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1072 445 199 51 8 chr17 63843871 63843997 -31428654 + L1M4b LINE L1 1571 1715 -5189 4 1072 974 275 53 73 chr17 63844222 63844436 -31428215 + L1M4b LINE L1 4410 4616 -2390 4 1072 855 178 128 25 chr17 63844436 63844632 -31428019 + B3 SINE B2 1 216 0 4 1072 974 275 53 73 chr17 63844632 63845037 -31427614 + L1M4b LINE L1 4617 5017 -1989 4 1072 238 217 43 14 chr17 63845077 63845147 -31427504 + B3 SINE B2 1 72 -144 4 1072 222 264 100 33 chr17 63845821 63845911 -31426740 - PB1D10 SINE Alu 0 117 22 4 1072 508 252 77 0 chr17 63846602 63846745 -31425906 - RSINE1 SINE B4 -1 164 11 4 1072 211 263 17 26 chr17 63848540 63848657 -31423994 + (CGG)n Simple_repeat Simple_repeat 1 116 0 4 1072 201 108 0 0 chr17 63848683 63848720 -31423931 + (CCG)n Simple_repeat Simple_repeat 3 39 0 4 1072 213 109 0 52 chr17 63848967 63849025 -31423626 + (CGG)n Simple_repeat Simple_repeat 2 56 0 4 1072 192 125 0 0 chr17 63849098 63849130 -31423521 + (CGG)n Simple_repeat Simple_repeat 3 34 0 4 1072 21 36 0 0 chr17 63849641 63849669 -31422982 + GC_rich Low_complexity Low_complexity 1 28 0 4 1072 40 83 0 0 chr17 63849693 63849789 -31422862 + GC_rich Low_complexity Low_complexity 1 96 0 4 1072 242 179 136 45 chr17 63850521 63850609 -31422042 - MLT1A LTR MaLR 0 374 279 4 1072 236 245 94 94 chr17 63850710 63850827 -31421824 - MLT1A LTR MaLR -287 121 5 4 1072 411 270 109 16 chr17 63851288 63851480 -31421171 + L1M5 LINE L1 5580 5789 -655 4 1072 353 228 0 12 chr17 63851946 63852026 -31420625 + PB1D7 SINE Alu 14 92 -28 4 1072 1016 261 112 18 chr17 63852082 63852413 -31420238 + ORR1D2 LTR MaLR 5 366 -4 4 1072 425 288 71 33 chr17 63852545 63852757 -31419894 + MER90a LTR ERV1 31 250 -364 4 1072 239 325 138 59 chr17 63853289 63853367 -31419284 + MER90a LTR ERV1 236 319 -295 4 1072 1123 36 0 28 chr17 63853367 63853508 -31419143 + B1_Mus1 SINE Alu 2 138 -10 4 1072 231 88 0 0 chr17 63853508 63853542 -31419109 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 4 1072 239 325 138 59 chr17 63853542 63853766 -31418885 + MER90a LTR ERV1 320 562 -52 4 1072 198 0 0 0 chr17 63853868 63853890 -31418761 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 4 1072 1124 72 0 0 chr17 63853890 63854028 -31418623 - B1_Mus1 SINE Alu -9 139 2 4 1072 489 310 0 46 chr17 63854640 63854739 -31417912 + B1F2 SINE Alu 5 103 -46 4 1072 1423 74 11 0 chr17 63854739 63854929 -31417722 + B2_Mm1t SINE B2 1 192 -1 4 1072 489 310 0 46 chr17 63854929 63854981 -31417670 + B1F2 SINE Alu 104 149 0 4 1072 292 297 78 8 chr17 63855583 63855712 -31416939 + MLT1E LTR MaLR 184 321 -332 4 1072 569 287 45 48 chr17 63856676 63856860 -31415791 - RLTR15 LTR ERVK -71 288 103 4 1072 795 11 0 0 chr17 63856860 63856952 -31415699 + (TC)n Simple_repeat Simple_repeat 1 92 0 4 1072 569 287 45 48 chr17 63856952 63857056 -31415595 - RLTR15 LTR ERVK -257 102 1 4 1072 2875 224 21 100 chr17 63857056 63857156 -31415495 - MYSERV-int LTR ERVK 0 6550 6455 4 1072 1138 49 42 0 chr17 63857156 63857298 -31415353 + B1_Mus1 SINE Alu 1 148 0 4 1072 2875 224 21 100 chr17 63857298 63857710 -31414941 - MYSERV-int LTR ERVK -96 6454 6074 4 1072 1625 47 0 0 chr17 63857710 63857900 -31414751 - B2_Mm1a SINE B2 -3 190 1 4 1072 2875 224 21 100 chr17 63857900 63858046 -31414605 - MYSERV-int LTR ERVK -477 6073 5933 4 1072 480 86 0 0 chr17 63858046 63858116 -31414535 + (TTGG)n Simple_repeat Simple_repeat 2 71 0 4 1072 2875 224 21 100 chr17 63858116 63858305 -31414346 - MYSERV-int LTR ERVK -618 5932 5768 4 1072 284 0 0 27 chr17 63858427 63858464 -31414187 + (CAGA)n Simple_repeat Simple_repeat 3 38 0 4 1072 345 278 42 25 chr17 63858550 63858668 -31413983 + RSINE1 SINE B4 46 165 0 4 1072 290 319 137 6 chr17 63860165 63860348 -31412303 + L1ME1 LINE L1 5394 5600 -579 4 1072 479 221 105 9 chr17 63860350 63860455 -31412196 + PB1D7 SINE Alu 3 117 -3 4 1072 230 291 71 39 chr17 63860680 63860834 -31411817 + L1ME1 LINE L1 5905 6063 -116 4 1072 1633 201 36 8 chr17 63860838 63861194 -31411457 - ORR1D1 LTR MaLR 0 374 9 4 1072 486 281 53 116 chr17 63861161 63861225 -31411426 + ORR1D1 LTR MaLR 117 176 -208 4 1072 360 97 0 0 chr17 63861225 63861287 -31411364 + (TCTCTG)n Simple_repeat Simple_repeat 2 63 0 4 1072 486 281 53 116 chr17 63861287 63861447 -31411204 + ORR1D1 LTR MaLR 177 327 -57 4 1072 1153 36 0 7 chr17 63861470 63861608 -31411043 - B1_Mm SINE Alu -9 138 2 4 1072 282 172 109 0 chr17 63861608 63861672 -31410979 + ORR1D1 LTR MaLR 314 384 0 4 1072 625 216 0 0 chr17 63861673 63861798 -31410853 + ORR1D1-int LTR MaLR 2 126 -1244 4 1072 971 127 84 6 chr17 63861798 63861964 -31410687 + LTRIS2 LTR ERV1 1 179 -385 4 1072 1873 201 83 33 chr17 63861975 63862432 -31410219 + ORR1D1-int LTR MaLR 889 1368 -2 4 1072 933 212 146 55 chr17 63862427 63862756 -31409895 + ORR1D1 LTR MaLR 1 359 -15 4 1072 433 296 31 23 chr17 63862927 63863055 -31409596 + RSINE1 SINE B4 5 133 -32 4 1072 231 36 0 0 chr17 63863061 63863089 -31409562 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 1072 1492 65 0 5 chr17 63863239 63863426 -31409225 + B2_Mm2 SINE B2 2 187 -8 4 1072 370 148 0 0 chr17 63864099 63864160 -31408491 - RLTR25B LTR ERVK 0 1028 968 4 1072 589 164 121 0 chr17 63864174 63864290 -31408361 + Lx9 LINE L1 7102 7231 -413 4 1072 401 292 17 0 chr17 63864485 63864605 -31408046 + Lx9 LINE L1 7242 7363 -281 4 1072 1238 170 57 0 chr17 63864599 63864846 -31407805 + L1_Mur3 LINE L1 4590 4850 -1030 4 1072 1118 60 0 0 chr17 63864849 63864983 -31407668 + B1_Mus2 SINE Alu 1 134 -13 4 1072 188 35 35 0 chr17 63864983 63865012 -31407639 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 4 1072 892 126 172 0 chr17 63865012 63865163 -31407488 - B2_Mm1t SINE B2 -15 178 2 4 1072 669 159 8 38 chr17 63865169 63865300 -31407351 - B1_Mus2 SINE Alu -1 146 20 4 1072 381 260 87 0 chr17 63865829 63865933 -31406718 - MER34 LTR ERV1 -429 113 1 4 1072 229 279 0 47 chr17 63866126 63866190 -31406461 - B4 SINE B4 -119 173 113 4 1072 270 0 0 0 chr17 63866276 63866306 -31406345 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 4 1072 491 28 0 53 chr17 63866306 63866381 -31406270 - B1_Mur4 SINE Alu -3 147 77 4 1072 381 222 0 0 chr17 63866547 63866646 -31406005 + (TG)n Simple_repeat Simple_repeat 2 100 0 4 1072 312 310 146 14 chr17 63866652 63866796 -31405855 - RSINE1 SINE B4 0 165 3 4 1072 568 262 33 55 chr17 63866796 63866972 -31405679 - ID_B1 SINE B4 -43 181 10 4 1072 234 231 117 22 chr17 63867204 63867341 -31405310 + LTR37A LTR ERV1 190 339 -87 4 1072 411 211 18 18 chr17 63867399 63867568 -31405083 + (TG)n Simple_repeat Simple_repeat 2 170 0 4 1072 3645 81 66 29 chr17 63867800 63868344 -31404307 - LTRIS2 LTR ERV1 0 564 1 4 1072 3241 195 71 23 chr17 63869056 63869847 -31402804 - Lx7 LINE L1 -1278 6418 5581 4 1072 731 312 66 54 chr17 63869847 63870349 -31402302 + RLTR18B LTR ERVK 3 510 -2 4 1072 1928 171 39 49 chr17 63870349 63870626 -31402025 - Lx7 LINE L1 -300 5580 5357 4 1072 2829 208 58 67 chr17 63870624 63871126 -31401525 - L1_Mur3 LINE L1 -2906 2974 2460 4 1072 180 0 0 0 chr17 63871126 63871146 -31401505 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 1072 2829 208 58 67 chr17 63871146 63871306 -31401345 - L1_Mur3 LINE L1 -3421 2459 2300 4 1072 735 12 0 0 chr17 63871306 63871390 -31401261 + (TTC)n Simple_repeat Simple_repeat 2 85 0 4 1072 1045 79 29 0 chr17 63871391 63871531 -31401120 - B1_Mus2 SINE Alu -2 145 2 4 1072 2829 208 58 67 chr17 63871531 63871729 -31400922 - L1_Mur3 LINE L1 -3581 2299 2119 4 1072 328 72 0 67 chr17 63871734 63871794 -31400857 + B1_Mur4 SINE Alu 95 150 0 4 1072 837 208 112 16 chr17 63871821 63872070 -31400581 - L1_Mur3 LINE L1 -3755 2125 1853 4 1072 507 148 0 0 chr17 63872427 63872515 -31400136 + (CA)n Simple_repeat Simple_repeat 1 88 0 4 1072 299 336 9 0 chr17 63872543 63872650 -31400001 + ID_B1 SINE B4 117 224 0 4 1072 230 96 53 27 chr17 63872650 63872676 -31399975 + A-rich Low_complexity Low_complexity 4 29 0 4 1072 1158 68 0 7 chr17 63872676 63872823 -31399828 + B1_Mus1 SINE Alu 1 146 -2 4 1072 230 96 53 27 chr17 63872823 63872871 -31399780 + A-rich Low_complexity Low_complexity 30 79 0 4 1072 1161 56 7 0 chr17 63873671 63873815 -31398836 + B1_Mus2 SINE Alu 1 145 -2 4 1072 390 21 0 0 chr17 63873815 63873862 -31398789 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 1072 3433 104 41 66 chr17 63874319 63874957 -31397694 - RLTR6_Mm LTR ERV1 -32 622 1 4 1072 365 88 0 17 chr17 63875479 63875537 -31397114 - HAL1-3A_ME LINE L1 -826 2032 1976 4 1072 186 43 0 0 chr17 63875545 63875568 -31397083 + (CG)n Simple_repeat Simple_repeat 1 23 0 4 1072 297 230 46 83 chr17 63875622 63875731 -31396920 - RMER5 LTR ERV1 -48 486 382 4 1072 466 231 22 44 chr17 63875736 63875872 -31396779 - RLTR9A LTR ERVK 0 368 236 4 1072 960 74 80 15 chr17 63876008 63876145 -31396506 + B1_Mus2 SINE Alu 1 146 -1 4 1072 313 331 43 16 chr17 63876205 63876389 -31396262 - RMER5 LTR ERV1 -160 374 186 4 1072 371 212 71 0 chr17 63876410 63876509 -31396142 - RMER5 LTR ERV1 -396 138 33 4 1072 1850 176 52 59 chr17 63876569 63876690 -31395961 - MTC LTR MaLR 0 421 309 4 1072 1200 48 0 14 chr17 63876690 63876838 -31395813 + B1_Mus1 SINE Alu 2 147 -1 4 1072 1850 176 52 59 chr17 63876838 63877140 -31395511 - MTC LTR MaLR -113 308 1 4 1072 322 175 0 0 chr17 63877622 63877679 -31394972 + URR1B DNA MER1_type 169 225 0 4 1072 461 282 97 42 chr17 63877757 63877994 -31394657 + MER31B LTR ERV1 212 461 -5 4 1072 193 119 48 0 chr17 63878450 63878492 -31394159 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 4 1072 1186 56 0 0 chr17 63878502 63878646 -31394005 - B1_Mus2 SINE Alu -1 146 3 4 1072 501 158 98 32 chr17 63878646 63878791 -31393860 + Lx7 LINE L1 7559 7696 0 4 1072 270 151 78 52 chr17 63878795 63878872 -31393779 + RLTR25B LTR ERVK 431 509 -519 4 1072 773 58 0 0 chr17 63878803 63878906 -31393745 + B1_Mus1 SINE Alu 37 139 -9 4 1072 964 171 8 128 chr17 63879634 63879876 -31392775 + URR1B DNA MER1_type 8 220 -5 4 1072 214 294 80 89 chr17 63881081 63881161 -31391490 - PB1D10 SINE Alu -5 112 27 4 1072 1461 70 5 5 chr17 63881161 63881349 -31391302 - B2_Mm1a SINE B2 -4 189 2 4 1072 214 294 80 89 chr17 63881349 63881380 -31391271 - PB1D10 SINE Alu -91 26 2 4 1072 183 42 0 0 chr17 63881475 63881499 -31391152 + (TTG)n Simple_repeat Simple_repeat 2 25 0 4 1072 342 256 40 32 chr17 63881821 63881946 -31390705 - B1F SINE Alu -10 139 14 5 1072 291 276 84 9 chr17 63883223 63883345 -31389306 + B1F1 SINE Alu 12 141 -8 5 1072 489 17 0 0 chr17 63883502 63883560 -31389091 + (CA)n Simple_repeat Simple_repeat 2 59 0 5 1072 264 100 0 0 chr17 63883657 63883697 -31388954 + (GGAGA)n Simple_repeat Simple_repeat 2 41 0 5 1072 2025 147 62 7 chr17 63883709 63884113 -31388538 - RMER10A LTR ERVL -8 434 9 5 1072 756 223 198 20 chr17 63884461 63884713 -31387938 + ORR1D1 LTR MaLR 2 298 -76 5 1072 621 163 0 39 chr17 63885479 63885607 -31387044 + RMER20B LTR ERVK 505 627 0 5 1072 536 219 13 13 chr17 63885615 63885772 -31386879 - Lx9 LINE L1 0 7644 7488 5 1072 22 0 0 0 chr17 63885820 63885842 -31386809 + AT_rich Low_complexity Low_complexity 1 22 0 5 1072 285 139 32 18 chr17 63885851 63885916 -31386735 - B2_Mm2 SINE B2 -82 116 46 5 1072 1322 96 11 0 chr17 63885947 63886124 -31386527 - B2_Mm1t SINE B2 -14 179 1 5 1072 3525 214 62 9 chr17 63886125 63886621 -31386030 - Lx9 LINE L1 -202 7442 6923 5 1072 2712 48 26 9 chr17 63886621 63886961 -31385690 - ORR1A1 LTR MaLR 0 346 1 5 1072 3525 214 62 9 chr17 63886961 63887237 -31385414 - Lx9 LINE L1 -722 6922 6629 5 1072 1118 113 45 0 chr17 63887262 63887439 -31385212 - B2_Mm2 SINE B2 -9 186 2 5 1072 576 0 0 0 chr17 63887441 63887505 -31385146 + (TATATG)n Simple_repeat Simple_repeat 2 65 0 5 1072 504 130 54 0 chr17 63887788 63887880 -31384771 - RMER19B LTR ERVK -805 97 1 5 1072 252 291 51 60 chr17 63887880 63887993 -31384658 - MER34A LTR ERV1 -450 121 10 5 1072 1128 134 207 5 chr17 63888173 63888361 -31384290 + URR1A DNA MER1_type 1 226 0 5 1072 186 71 0 0 chr17 63888586 63888614 -31384037 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 5 1072 1148 89 7 0 chr17 63888626 63888772 -31383879 - B1_Mus1 SINE Alu 0 148 2 5 1072 192 200 0 0 chr17 63889182 63889237 -31383414 + CT-rich Low_complexity Low_complexity 2 56 0 5 1072 3261 47 0 3 chr17 63889350 63889716 -31382935 - RLTR10B2 LTR ERVK 0 365 1 5 1072 226 0 29 29 chr17 63889753 63889788 -31382863 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1072 396 0 0 0 chr17 63890405 63890449 -31382202 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1072 602 293 87 76 chr17 63890626 63890914 -31381737 - B4A SINE B4 0 292 2 5 1072 435 38 0 0 chr17 63891157 63891210 -31381441 + (CATA)n Simple_repeat Simple_repeat 2 54 0 5 1072 553 250 60 8 chr17 63891231 63891364 -31381287 - RSINE1 SINE B4 -23 142 3 5 1072 251 47 70 0 chr17 63891369 63891412 -31381239 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 5 1072 7626 67 1 11 chr17 63891430 63892816 -31379835 - L1_Mus1 LINE L1 0 6567 5202 5 1072 2928 123 37 51 chr17 63893578 63893606 -31379045 + RLTR45 LTR ERVK 1 28 -454 5 1072 1812 21 0 0 chr17 63893606 63893797 -31378854 + B2_Mm1t SINE B2 2 192 -1 5 1072 2928 123 37 51 chr17 63893797 63894257 -31378394 + RLTR45 LTR ERVK 29 482 0 5 1072 898 299 62 29 chr17 63894361 63894637 -31378014 - MTEa LTR MaLR -94 285 1 5 1072 272 342 99 21 chr17 63894637 63894807 -31377844 - LTR33C LTR ERVL -26 603 419 5 1072 693 292 63 16 chr17 63895243 63895497 -31377154 - RMER15 LTR ERVL -14 561 296 5 1072 335 282 33 33 chr17 63895534 63895655 -31376996 - RMER15 LTR ERVL -452 123 3 5 1072 335 294 90 0 chr17 63895670 63895812 -31376839 + L1MC LINE L1 4217 4380 -1766 5 1072 353 280 11 11 chr17 63895814 63895908 -31376743 + B4 SINE B4 2 95 -197 5 1072 370 280 17 17 chr17 63896049 63896169 -31376482 - Lx9 LINE L1 -190 7454 7335 5 1072 384 22 0 0 chr17 63896623 63896668 -31375983 + (T)n Simple_repeat Simple_repeat 1 45 0 5 1072 1342 27 0 0 chr17 63896668 63896815 -31375836 - B1_Mus2 SINE Alu 0 147 1 5 1072 2181 186 164 47 chr17 63897548 63898079 -31374572 + RMER19B LTR ERVK 310 902 0 5 1072 755 257 15 119 chr17 63898530 63898791 -31373860 + RMER15 LTR ERVL 274 507 -68 5 1072 459 188 39 29 chr17 63898863 63898967 -31373684 - RMER15 LTR ERVL -469 106 2 5 1072 447 19 0 0 chr17 63899167 63899219 -31373432 + (GA)n Simple_repeat Simple_repeat 1 52 0 5 1072 284 349 73 61 chr17 63899418 63899748 -31372903 + HAL1 LINE L1 669 995 -1512 5 1072 1193 82 0 0 chr17 63899748 63899894 -31372757 + B1_Mus1 SINE Alu 2 147 -1 5 1072 284 349 73 61 chr17 63899894 63900150 -31372501 + HAL1 LINE L1 996 1262 -1245 5 1072 226 278 74 53 chr17 63900333 63900428 -31372223 + MLT1H LTR MaLR 90 186 -363 5 1072 700 130 146 0 chr17 63900807 63900930 -31371721 - B1_Mus1 SINE Alu -7 141 1 5 1072 194 270 106 53 chr17 63902122 63902216 -31370435 - L2b LINE L2 -1 3374 3276 5 1072 40019 48 4 5 chr17 63902384 63908662 -31363989 - L1Md_T LINE L1 0 6582 309 5 1072 231 319 98 49 chr17 63908662 63908784 -31363867 + MER102c DNA MER1_type 179 306 -25 5 1072 701 289 18 24 chr17 63909059 63909229 -31363422 + B3A SINE B2 1 169 -29 5 1072 342 45 0 0 chr17 63909230 63909274 -31363377 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1072 263 258 121 0 chr17 63909304 63909370 -31363281 - MLT1E1A LTR MaLR -599 81 8 5 1072 674 154 29 29 chr17 63909504 63909644 -31363007 - Lx7 LINE L1 -2 7694 7555 5 1072 299 152 12 37 chr17 63909661 63909743 -31362908 + GA-rich Low_complexity Low_complexity 3 82 0 5 1072 1181 196 101 40 chr17 63909777 63910074 -31362577 - RLTR46 LTR ERVK -5 315 1 5 1072 8329 191 65 41 chr17 63910077 63910221 -31362430 - Lx7 LINE L1 -193 7503 7392 5 1072 1386 14 0 0 chr17 63910221 63910368 -31362283 + B1_Mm SINE Alu 1 147 0 5 1072 8329 191 65 41 chr17 63910368 63910703 -31361948 - Lx7 LINE L1 -305 7391 7064 5 1072 486 49 0 0 chr17 63910703 63910764 -31361887 + (TG)n Simple_repeat Simple_repeat 1 61 0 5 1072 8329 182 52 59 chr17 63910764 63912331 -31360320 - Lx7 LINE L1 -633 7063 5450 5 1072 3447 36 0 0 chr17 63912370 63912756 -31359895 - L1Md_A LINE L1 -1 6581 6196 5 1072 311 260 200 0 chr17 63912770 63912870 -31359781 - Lx8 LINE L1 -277 7196 7077 5 1072 1133 88 12 0 chr17 63912877 63913048 -31359603 + (TTTC)n Simple_repeat Simple_repeat 2 174 0 5 1072 428 0 19 0 chr17 63913051 63913103 -31359548 + (TTCC)n Simple_repeat Simple_repeat 2 54 0 5 1072 753 154 68 37 chr17 63913107 63913269 -31359382 - B2_Mm2 SINE B2 -2 193 27 5 1072 719 274 82 22 chr17 63914127 63914358 -31358293 - MLT2D LTR ERVL -167 247 3 5 1072 5175 194 36 27 chr17 63915731 63916888 -31355763 + Lx7 LINE L1 4525 5721 -441 5 1072 248 200 17 0 chr17 63916914 63916974 -31355677 + (TATATG)n Simple_repeat Simple_repeat 4 64 0 5 1072 5013 221 168 15 chr17 63916979 63917044 -31355607 + Lx7 LINE L1 6102 6165 -1531 5 1072 429 20 0 0 chr17 63917044 63917094 -31355557 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1072 5013 221 168 15 chr17 63917094 63918412 -31354239 + Lx7 LINE L1 6166 7695 -1 5 1072 713 269 125 8 chr17 63918473 63918713 -31353938 + Tigger6a DNA MER2_type 136 403 -680 5 1072 469 199 11 33 chr17 63918784 63918966 -31353685 + (TA)n Simple_repeat Simple_repeat 2 179 0 5 1072 392 240 10 10 chr17 63918967 63919064 -31353587 + Tigger6a DNA MER2_type 649 745 -338 5 1072 375 269 0 0 chr17 63919212 63919290 -31353361 - ID4_ SINE ID -2 81 4 5 1072 2340 84 17 61 chr17 63919305 63919649 -31353002 + ORR1A4 LTR MaLR 1 329 0 5 1072 282 362 26 43 chr17 63919712 63919946 -31352705 + MIR SINE MIR 30 259 -3 5 1072 340 238 118 12 chr17 63920109 63920194 -31352457 - B1F2 SINE Alu -1 148 55 5 1072 1318 187 27 0 chr17 63920803 63921022 -31351629 + MTC LTR MaLR 196 420 -1 5 1072 3672 172 166 145 chr17 63921022 63922254 -31350397 + MTC-int LTR MaLR 2 1258 0 5 1072 2694 145 34 10 chr17 63922254 63922665 -31349986 + MTC LTR MaLR 1 421 0 5 1072 1216 320 77 5 chr17 63922920 63923573 -31349078 - L1MD2 LINE L1 -363 5996 5297 5 1072 1136 230 111 33 chr17 63923720 63924081 -31348570 - MTD LTR MaLR -1 418 1 5 1072 231 227 0 39 chr17 63925354 63925432 -31347219 + (TA)n Simple_repeat Simple_repeat 2 76 0 5 1072 376 182 0 13 chr17 63925436 63925514 -31347137 - Lx4A LINE L1 -3 7055 6979 5 1072 189 0 0 0 chr17 63925571 63925592 -31347059 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 1072 707 143 228 18 chr17 63925687 63925858 -31346793 - URR1B DNA MER1_type -18 207 1 5 1072 279 290 241 25 chr17 63925967 63926356 -31346295 + L2c LINE L2 2937 3425 -1 5 1072 243 268 0 0 chr17 63926490 63926587 -31346064 + T-rich Low_complexity Low_complexity 1 97 0 5 1072 1224 58 47 0 chr17 63926627 63926798 -31345853 + B2_Mm2 SINE B2 17 195 0 5 1072 225 0 0 0 chr17 63926953 63926978 -31345673 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 1072 592 250 39 0 chr17 63928010 63928138 -31344513 - ID_B1 SINE B4 -91 133 1 5 1072 735 173 46 20 chr17 63928380 63928533 -31344118 - ORR1D1 LTR MaLR 0 374 218 5 1072 690 140 9 0 chr17 63928537 63928644 -31344007 - ORR1D1 LTR MaLR -266 108 1 5 1072 302 236 93 68 chr17 63928769 63928887 -31343764 + MLT1K LTR MaLR 1 121 -474 5 1072 1894 219 35 10 chr17 63928967 63929369 -31343282 - MTD LTR MaLR -2 417 6 5 1072 7669 105 22 22 chr17 63929485 63930948 -31341703 + L1_Mus3 LINE L1 4793 6240 -398 5 1072 1711 37 0 10 chr17 63930948 63931141 -31341510 + B2_Mm1a SINE B2 1 191 -2 5 1072 6232 114 64 48 chr17 63931141 63931511 -31341140 + L1_Mus3 LINE L1 6241 6637 -1 5 1072 21 36 0 0 chr17 63931614 63931642 -31341009 + AT_rich Low_complexity Low_complexity 1 28 0 5 1072 315 299 119 47 chr17 63931713 63931835 -31340816 - Tigger15a DNA TcMar -349 366 235 5 1072 1087 81 6 6 chr17 63931835 63931996 -31340655 + (GGAGA)n Simple_repeat Simple_repeat 1 161 0 5 1072 315 299 119 47 chr17 63931996 63932108 -31340543 - Tigger15a DNA TcMar -481 234 115 5 1072 1233 220 90 12 chr17 63932373 63932718 -31339933 + ORR1D1 LTR MaLR 3 374 0 5 1072 261 75 0 0 chr17 63932821 63932861 -31339790 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 5 1072 1218 68 0 0 chr17 63932862 63933008 -31339643 - B1_Mus1 SINE Alu -1 147 2 5 1072 333 330 9 0 chr17 63935291 63935403 -31337248 + PB1D7 SINE Alu 1 113 -7 5 1072 21 0 0 0 chr17 63935404 63935425 -31337226 + AT_rich Low_complexity Low_complexity 1 21 0 5 1072 561 198 0 0 chr17 63935496 63935602 -31337049 - L1_Rod LINE L1 -399 5448 5343 5 1072 1110 81 50 44 chr17 63935613 63935793 -31336858 - B2_Mm2 SINE B2 -7 188 8 5 1072 1603 215 88 34 chr17 63935814 63936033 -31336618 - L1_Rod LINE L1 -527 5320 5089 5 1072 577 25 12 12 chr17 63936033 63936113 -31336538 + (TTTTG)n Simple_repeat Simple_repeat 2 81 0 5 1072 1603 215 88 34 chr17 63936113 63936394 -31336257 - L1_Rod LINE L1 -759 5088 4795 5 1072 2784 252 43 68 chr17 63936363 63938210 -31334441 - L1_Rod LINE L1 -1667 4473 2711 5 1072 310 206 76 0 chr17 63938207 63938299 -31334352 - L1_Rod LINE L1 -2865 2982 2884 6 1072 3659 42 9 21 chr17 63938662 63938801 -31333850 + L1Md_F2 LINE L1 6150 6288 -294 6 1072 4752 10 0 0 chr17 63938801 63939294 -31333357 + MT2_Mm LTR ERVL 1 493 0 6 1072 3659 42 9 21 chr17 63939294 63939591 -31333060 + L1Md_F2 LINE L1 6289 6581 -1 6 1072 298 267 132 62 chr17 63939735 63939879 -31332772 + RSINE1 SINE B4 12 165 0 6 1072 459 288 127 109 chr17 63940502 63940849 -31331802 - ORR1E LTR MaLR -6 353 1 6 1072 1720 233 62 35 chr17 63941654 63942139 -31330512 - RLTR16 LTR ERVK -1 504 7 6 1072 222 220 0 20 chr17 63942200 63942251 -31330400 + CT-rich Low_complexity Low_complexity 2 51 0 6 1072 5085 48 2 3 chr17 63942923 63943510 -31329141 - L1Md_F2 LINE L1 0 6582 5997 6 1072 221 123 88 0 chr17 63943915 63943972 -31328679 + (TATATG)n Simple_repeat Simple_repeat 1 62 0 6 1072 405 292 9 0 chr17 63945544 63945650 -31327001 - PB1D9 SINE Alu -11 109 3 6 1072 1219 61 0 0 chr17 63945805 63945952 -31326699 - B1_Mm SINE Alu 0 147 1 6 1072 395 226 75 52 chr17 63945966 63946139 -31326512 - L1MA5 LINE L1 -2 6298 6122 6 1072 360 0 0 0 chr17 63946311 63946351 -31326300 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1072 195 42 0 0 chr17 63947187 63947211 -31325440 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1072 511 229 16 63 chr17 63947224 63947350 -31325301 - B1_Mur3 SINE Alu 0 120 1 6 1072 1701 176 82 40 chr17 63947448 63947956 -31324695 + RMER6C LTR ERVK 1 690 0 6 1072 375 154 0 0 chr17 63948075 63948140 -31324511 + (CAG)n Simple_repeat Simple_repeat 1 65 0 6 1072 450 146 0 0 chr17 63948371 63948453 -31324198 + (TA)n Simple_repeat Simple_repeat 2 83 0 6 1072 436 165 0 10 chr17 63948465 63948563 -31324088 - Lx9 LINE L1 -31 7613 7517 6 1072 216 0 0 0 chr17 63948564 63948588 -31324063 + (TA)n Simple_repeat Simple_repeat 1 24 0 6 1072 1142 164 26 4 chr17 63948589 63948815 -31323836 - Lx9 LINE L1 -176 7468 7238 6 1072 236 341 57 57 chr17 63948956 63949096 -31323555 - L2c LINE L2 0 3387 3248 6 1072 318 250 130 0 chr17 63949468 63949576 -31323075 + MT2A LTR ERVL 2 123 -410 6 1072 797 260 102 121 chr17 63949480 63949614 -31323037 + MTEa LTR MaLR 15 156 -223 6 1072 2052 39 16 4 chr17 63949614 63949872 -31322779 + L1Md_F3 LINE L1 6323 6583 -1 6 1072 797 260 102 121 chr17 63949872 63950045 -31322606 + MTEa LTR MaLR 157 310 -69 6 1072 255 31 0 0 chr17 63950045 63950077 -31322574 + (CAA)n Simple_repeat Simple_repeat 2 33 0 6 1072 797 260 102 121 chr17 63950077 63950140 -31322511 + MTEa LTR MaLR 311 379 0 6 1072 405 278 114 75 chr17 63950899 63951257 -31321394 + L1MC4 LINE L1 7446 7817 -225 6 1072 279 0 0 0 chr17 63951678 63951709 -31320942 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1072 351 0 0 0 chr17 63952031 63952070 -31320581 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1072 599 112 0 10 chr17 63952080 63952179 -31320472 + (TA)n Simple_repeat Simple_repeat 2 99 0 6 1072 504 227 204 0 chr17 63952338 63952514 -31320137 + B3 SINE B2 1 212 -4 6 1072 7256 60 0 4 chr17 63952546 63953467 -31319184 + L1Md_F2 LINE L1 5653 6569 -13 6 1072 604 288 7 7 chr17 63953958 63954105 -31318546 - ID_B1 SINE B4 0 224 78 6 1072 21 36 0 0 chr17 63954522 63954550 -31318101 + AT_rich Low_complexity Low_complexity 1 28 0 6 1072 496 270 99 22 chr17 63954558 63954740 -31317911 - B3A SINE B2 -2 196 1 6 1072 790 191 8 0 chr17 63955246 63955377 -31317274 - B1_Mus2 SINE Alu -7 140 9 6 1072 1108 52 0 0 chr17 63955926 63956061 -31316590 + B1_Mm SINE Alu 1 135 -12 6 1072 437 0 19 0 chr17 63956062 63956115 -31316536 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 6 1072 243 114 0 0 chr17 63957302 63957346 -31315305 + (GA)n Simple_repeat Simple_repeat 1 44 0 6 1072 571 287 38 13 chr17 63957360 63957519 -31315132 - B3A SINE B2 -21 177 15 6 1072 810 160 3 20 chr17 63957718 63958079 -31314572 + (TG)n Simple_repeat Simple_repeat 1 354 0 6 1072 207 0 0 0 chr17 63958100 63958123 -31314528 + (TTA)n Simple_repeat Simple_repeat 2 24 0 6 1072 1101 88 0 26 chr17 63958123 63958274 -31314377 - B1_Mus1 SINE Alu -1 147 1 6 1072 858 158 21 7 chr17 63958276 63958416 -31314235 - B1_Mur4 SINE Alu 0 150 9 6 1072 240 35 0 0 chr17 63958442 63958471 -31314180 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1072 271 350 101 43 chr17 63959498 63959686 -31312965 - MIRb SINE MIR -35 233 35 6 1072 630 303 69 33 chr17 63959820 63960243 -31312408 + L1M2 LINE L1 4419 4856 -1287 6 1072 188 163 0 23 chr17 63960247 63960291 -31312360 + T-rich Low_complexity Low_complexity 3 45 0 6 1072 1301 223 90 3 chr17 63960299 63960654 -31311997 - Lx2B LINE L1 -37 6963 6578 6 1072 357 281 0 29 chr17 63960654 63960793 -31311858 + L1M2 LINE L1 4842 4976 -1167 6 1072 302 328 73 16 chr17 63960871 63960995 -31311656 + ID_B1 SINE B4 77 207 -17 6 16 33863 46 0 3 chr17 63961117 63966554 -31306097 + L1Md_T LINE L1 73 5589 -297 6 1073 8319 34 10 0 chr17 63966554 63967540 -31305111 + L1Md_T LINE L1 5590 6585 0 6 1073 322 335 92 16 chr17 63967568 63967753 -31304898 + MIRb SINE MIR 70 268 0 6 1073 589 294 18 53 chr17 63967778 63967947 -31304704 + RSINE1 SINE B4 2 164 -1 6 1073 2072 204 98 36 chr17 63968394 63968927 -31303724 + RLTR20B3 LTR ERVK 3 568 -9 6 1073 1157 247 100 3 chr17 63969056 63969357 -31303294 - MTD LTR MaLR -15 404 75 6 1073 487 206 90 42 chr17 63969357 63969524 -31303127 - MT2A LTR ERVL 0 533 359 6 1073 651 250 150 44 chr17 63969477 63969623 -31303028 - MTB_Mm LTR MaLR -157 250 82 6 1073 2581 151 4 67 chr17 63969623 63970099 -31302552 + RLTR41 LTR ERV1 1 446 0 6 1073 651 250 150 44 chr17 63970099 63970178 -31302473 - MTB_Mm LTR MaLR -326 81 1 6 1073 529 144 192 17 chr17 63970178 63970298 -31302353 + MTD LTR MaLR 279 419 0 6 1073 459 0 0 0 chr17 63971016 63971067 -31301584 + (TTCC)n Simple_repeat Simple_repeat 4 54 0 6 1073 1614 164 19 5 chr17 63972478 63972815 -31299836 + RLTR1B LTR ERV1 246 624 0 6 1073 452 128 0 13 chr17 63972876 63972955 -31299696 + (TCC)n Simple_repeat Simple_repeat 2 79 0 6 1073 4122 89 3 17 chr17 63973220 63973811 -31298840 - L1_Mus3 LINE L1 0 6638 6056 6 1073 24967 97 22 131 chr17 63973811 63977570 -31295081 + L1_Mus1 LINE L1 561 3752 -2131 6 1073 638 186 6 90 chr17 63977570 63977606 -31295045 + ID_B1 SINE B4 64 215 -9 6 1073 1033 58 0 0 chr17 63977606 63977736 -31294915 + B1_Mm SINE Alu 9 138 -9 6 1073 393 39 0 0 chr17 63977736 63977787 -31294864 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 6 1073 24967 84 11 101 chr17 63977793 63980584 -31292067 + L1_Mus1 LINE L1 3753 6567 0 6 1073 19510 135 7 3 chr17 63980587 63982495 -31290156 - L1VL4 LINE L1 -1228 4655 2740 6 1073 198 0 0 0 chr17 63982495 63982517 -31290134 + (TA)n Simple_repeat Simple_repeat 2 23 0 6 1073 19510 134 11 6 chr17 63982517 63984501 -31288150 - L1VL4 LINE L1 -3144 2739 744 6 1073 422 223 278 6 chr17 63984761 63984937 -31287714 + ID_B1 SINE B4 1 224 0 6 1073 345 301 39 22 chr17 63985467 63985647 -31287004 - L1MB4 LINE L1 -186 5994 5812 6 1073 371 299 117 59 chr17 63985661 63985917 -31286734 - L1MB4 LINE L1 -430 5754 5484 6 1073 302 219 31 0 chr17 63986038 63986102 -31286549 - ID4 SINE ID -16 67 2 6 1073 506 281 16 32 chr17 63986155 63986280 -31286371 - RSINE1 SINE B4 -10 155 33 6 1073 282 168 171 8 chr17 63986326 63986454 -31286197 - L1MB4 LINE L1 -745 5419 5274 6 1073 317 296 62 30 chr17 63986624 63986725 -31285926 - B1F SINE Alu -29 120 17 6 1073 293 409 0 19 chr17 63986725 63986778 -31285873 - ID_B1 SINE B4 -23 198 48 6 1073 243 0 0 0 chr17 63986903 63986930 -31285721 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1073 216 111 0 0 chr17 63987356 63987392 -31285259 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1073 186 133 0 0 chr17 63988196 63988226 -31284425 + (TTTTC)n Simple_repeat Simple_repeat 4 33 0 6 1073 324 0 0 0 chr17 63988418 63988454 -31284197 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1073 745 347 169 20 chr17 63988485 63989043 -31283608 + MLT1E LTR MaLR 8 648 -5 6 1073 631 367 40 51 chr17 63989389 63989642 -31283009 - B4A SINE B4 0 292 43 6 1073 10258 2 0 0 chr17 63990020 63991909 -31280742 - L1Md_A LINE L1 0 6582 4694 6 1073 496 318 23 0 chr17 63991950 63992082 -31280569 + B1F SINE Alu 8 142 -7 6 1073 368 338 95 18 chr17 63993254 63993537 -31279114 - L1MC4a LINE L1 -1905 5977 5673 6 1073 596 231 8 24 chr17 63993826 63993917 -31278734 - RSINE1 SINE B4 -37 128 38 6 1073 6004 112 15 110 chr17 63993917 63995004 -31277647 + RLTR13C1 LTR ERVK 1 983 0 6 1073 596 231 8 24 chr17 63995004 63995036 -31277615 - RSINE1 SINE B4 -128 37 7 6 1073 2402 90 32 0 chr17 63996030 63996373 -31276278 - Lx2 LINE L1 -2 6995 6642 6 1073 682 277 103 34 chr17 63996541 63996786 -31275865 - L1MA5A LINE L1 -435 5862 5599 6 1073 414 0 0 0 chr17 63996786 63996832 -31275819 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1073 682 277 103 34 chr17 63996832 63996993 -31275658 - L1MA5A LINE L1 -699 5598 5428 6 1073 291 114 0 0 chr17 63996993 63997037 -31275614 + (T)n Simple_repeat Simple_repeat 1 44 0 6 1073 1059 44 81 0 chr17 63997037 63997173 -31275478 - B1_Mm SINE Alu 0 147 1 6 1073 602 282 20 27 chr17 63997230 63997376 -31275275 - B1_Mur1 SINE Alu 0 149 5 6 1073 551 307 89 86 chr17 63997490 63997850 -31274801 + MTEa LTR MaLR 12 372 -7 6 1073 344 307 18 95 chr17 63998987 63999156 -31273495 - Tigger9b DNA MER2_type -461 163 8 6 1073 1233 27 0 0 chr17 63999232 63999378 -31273273 + B1_Mus2 SINE Alu 2 147 0 6 1073 21 36 0 0 chr17 63999422 63999450 -31273201 + AT_rich Low_complexity Low_complexity 1 28 0 6 1073 1158 252 31 38 chr17 63999453 63999999 -31272652 - Lx7 LINE L1 0 7696 7050 6 1073 2829 157 57 15 chr17 64000045 64000117 -31272534 - RLTR20B3 LTR ERVK -21 556 485 1 1073 234 0 0 0 chr17 64000117 64000143 -31272508 + (CAGA)n Simple_repeat Simple_repeat 2 27 0 2 1073 402 57 0 0 chr17 64000144 64000197 -31272454 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 1073 2829 157 57 15 chr17 64000197 64000652 -31271999 - RLTR20B3 LTR ERVK -93 484 8 1 1073 293 289 26 0 chr17 64000657 64000733 -31271918 - Lx7 LINE L1 -709 6987 6910 4 1073 1125 92 0 0 chr17 64000733 64000875 -31271776 + B1_Mus1 SINE Alu 1 142 -6 5 1073 3014 219 96 14 chr17 64000905 64001612 -31271039 - Lx7 LINE L1 -777 6919 6155 4 1073 3060 191 22 113 chr17 64001623 64002374 -31270277 - L1_Mur3 LINE L1 -1777 4103 3440 6 1073 698 20 40 0 chr17 64002374 64002473 -31270178 - L1Md_T LINE L1 0 6582 6480 7 1073 3060 191 22 113 chr17 64002473 64002582 -31270069 - L1_Mur3 LINE L1 -2441 3439 3321 6 1073 354 23 0 0 chr17 64002712 64002755 -31269896 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 8 1073 33 56 0 0 chr17 64002994 64003048 -31269603 + AT_rich Low_complexity Low_complexity 1 54 0 9 1073 2221 82 0 10 chr17 64003051 64003062 -31269589 - L1_Mus1 LINE L1 0 6567 6559 1 1073 1098 96 0 14 chr17 64003062 64003210 -31269441 - B1_Mus2 SINE Alu -1 146 1 1 1073 2221 82 0 10 chr17 64003210 64003495 -31269156 - L1_Mus1 LINE L1 -9 6558 6274 1 1073 4312 70 7 1 chr17 64003496 64004119 -31268532 + L1_Mus1 LINE L1 5309 5933 -634 1 1073 445 48 0 0 chr17 64004119 64004182 -31268469 - B1_Mur4 SINE Alu -2 148 86 1 1073 1138 82 0 0 chr17 64004332 64004479 -31268172 - B1_Mus2 SINE Alu 0 147 1 1 1073 5275 186 28 82 chr17 64004479 64004972 -31267679 - L1_Mur3 LINE L1 -2545 3335 2917 6 1073 1028 70 7 0 chr17 64004972 64005114 -31267537 + (TTTC)n Simple_repeat Simple_repeat 3 145 0 1 1073 1076 90 0 7 chr17 64005115 64005260 -31267391 - B1_Mur4 SINE Alu -6 144 1 1 1073 5275 186 28 82 chr17 64005260 64005929 -31266722 - L1_Mur3 LINE L1 -2964 2916 2258 6 1073 2224 162 13 20 chr17 64005929 64006326 -31266325 + ORR1B1 LTR MaLR 1 394 0 1 1073 5275 186 28 82 chr17 64006326 64006597 -31266054 - L1_Mur3 LINE L1 -3623 2257 1975 6 1073 312 280 64 27 chr17 64006682 64006792 -31265859 + PB1D10 SINE Alu 3 116 -1 1 1073 339 25 0 0 chr17 64007394 64007434 -31265217 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1073 556 285 80 100 chr17 64008399 64008750 -31263901 + ORR1E LTR MaLR 1 344 -15 2 1073 252 0 0 0 chr17 64008771 64008799 -31263852 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 2 1073 516 16 0 0 chr17 64008878 64008939 -31263712 + (TTCTC)n Simple_repeat Simple_repeat 1 61 0 2 1073 1970 166 64 8 chr17 64009036 64009394 -31263257 + ORR1C1 LTR MaLR 1 378 0 2 1073 259 349 171 0 chr17 64009532 64009684 -31262967 - MIRb SINE MIR -37 231 54 2 1073 206 162 0 26 chr17 64009852 64009890 -31262761 + T-rich Low_complexity Low_complexity 4 40 0 2 1073 1011 59 89 0 chr17 64009890 64010025 -31262626 - B1_Mus1 SINE Alu 0 148 2 2 1073 737 246 6 0 chr17 64010643 64010810 -31261841 + B3A SINE B2 4 171 -27 2 1073 1103 228 4 0 chr17 64011114 64011346 -31261305 - MTC LTR MaLR -187 234 2 2 1073 228 67 0 0 chr17 64012152 64012182 -31260469 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2 1073 904 248 186 6 chr17 64012527 64012872 -31259779 + MTD LTR MaLR 13 419 0 3 1073 2719 200 80 16 chr17 64013094 64013611 -31259040 - Lx9 LINE L1 -2 7642 7090 3 1073 383 0 21 0 chr17 64013611 64013658 -31258993 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 3 1073 2719 200 80 16 chr17 64013658 64013765 -31258886 - Lx9 LINE L1 -555 7089 6980 3 1073 428 167 51 20 chr17 64013766 64013864 -31258787 - ORR1D1 LTR MaLR -1 373 273 3 1073 406 234 80 4 chr17 64013914 64014040 -31258611 - Lx9 LINE L1 -1792 5904 5778 3 1073 486 200 247 6 chr17 64014040 64014206 -31258445 - Lx9 LINE L1 -467 5380 5175 3 1073 2651 145 7 5 chr17 64014213 64014629 -31258022 + MTC LTR MaLR 5 421 0 3 1073 1231 140 0 54 chr17 64014631 64014873 -31257778 + MTC-int LTR MaLR 5 233 -1025 3 1073 38748 30 1 0 chr17 64014874 64021659 -31250992 - L1Md_T LINE L1 -2 6583 1 3 1073 2955 187 56 50 chr17 64021661 64022522 -31250129 + MTC-int LTR MaLR 223 1255 -3 3 1073 566 200 0 9 chr17 64022525 64022641 -31250010 + MTC LTR MaLR 1 115 -306 3 1073 2878 176 16 45 chr17 64022642 64023389 -31249262 - L1_Rod LINE L1 -4021 1826 1097 3 1073 1260 116 16 21 chr17 64023389 64023583 -31249068 - B2_Mm2 SINE B2 -1 194 2 3 1073 2097 226 17 39 chr17 64023583 64023858 -31248793 - L1_Rod LINE L1 -6512 1096 829 3 1073 1071 87 64 6 chr17 64023864 64024037 -31248614 - RMER12 LTR ERVK -679 643 461 3 1073 1120 162 5 0 chr17 64024038 64024223 -31248428 - RMER12 LTR ERVK -1136 186 1 3 1073 529 329 27 15 chr17 64024360 64024622 -31248029 - RMER15 LTR ERVL -5 570 306 3 1073 262 302 18 5 chr17 64025025 64025160 -31247491 + PB1 SINE Alu 10 147 -2 4 1073 232 283 16 16 chr17 64025176 64025237 -31247414 + ID4_ SINE ID 9 69 -14 4 1073 1971 183 33 11 chr17 64025238 64025602 -31247049 + ORR1D1 LTR MaLR 1 372 -2 4 1073 421 226 86 9 chr17 64025640 64025756 -31246895 - B3 SINE B2 -22 194 70 4 1073 592 242 44 13 chr17 64026578 64026737 -31245914 + RSINE1 SINE B4 2 165 0 4 1073 279 79 0 0 chr17 64026740 64026778 -31245873 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 4 1073 1073 233 82 14 chr17 64028361 64028653 -31243998 + RMER1A Other Other 45 356 -674 4 1073 333 271 37 8 chr17 64029055 64029189 -31243462 + RLTR15 LTR ERVK 2 139 -220 4 1073 215 98 0 68 chr17 64029193 64029237 -31243414 + G-rich Low_complexity Low_complexity 1 41 0 4 1073 221 183 78 23 chr17 64029563 64029692 -31242959 + (TA)n Simple_repeat Simple_repeat 1 136 0 4 1073 494 307 120 72 chr17 64030088 64030379 -31242272 + MLT1H1 LTR MaLR 231 541 -14 5 1073 385 218 84 0 chr17 64031096 64031238 -31241413 - MER20B DNA MER1_type -58 725 572 5 1073 350 135 8 94 chr17 64031891 64032284 -31240367 + (CCA)n Simple_repeat Simple_repeat 1 359 0 5 1073 268 101 26 86 chr17 64032306 64032457 -31240194 + (CCA)n Simple_repeat Simple_repeat 1 142 0 5 1073 243 283 131 0 chr17 64032620 64032719 -31239932 + MLT1C LTR MaLR 13 124 -343 5 1073 227 389 110 14 chr17 64032751 64032897 -31239754 + MLT1C LTR MaLR 186 345 -122 5 1073 396 40 0 0 chr17 64033165 64033215 -31239436 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1073 232 275 52 60 chr17 64034531 64034647 -31238004 + MLT1F2 LTR MaLR 3 117 -443 5 1073 465 333 40 5 chr17 64036048 64036250 -31236401 - MLT1A0 LTR MaLR -128 237 29 5 1073 326 68 40 26 chr17 64036682 64036758 -31235893 + (TTG)n Simple_repeat Simple_repeat 2 78 0 5 1073 198 91 0 0 chr17 64036751 64036784 -31235867 + (T)n Simple_repeat Simple_repeat 1 33 0 5 1073 198 0 0 0 chr17 64037979 64038001 -31234650 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 5 1073 1214 121 26 5 chr17 64038003 64038194 -31234457 - B2_Mm2 SINE B2 0 195 1 6 1073 406 88 0 0 chr17 64038472 64038540 -31234111 + L1_Mus3 LINE L1 6570 6637 -1 6 1073 270 0 0 0 chr17 64039209 64039239 -31233412 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 1073 304 271 24 0 chr17 64039837 64039922 -31232729 + PB1D7 SINE Alu 22 108 -12 6 1073 242 161 35 35 chr17 64042674 64042732 -31229919 + L1M3 LINE L1 5484 5541 -627 6 1073 1113 200 216 37 chr17 64042754 64042915 -31229736 + RMER17C LTR ERVK 1 176 -234 6 1073 387 0 0 0 chr17 64042915 64042958 -31229693 + (TC)n Simple_repeat Simple_repeat 1 43 0 6 1073 1113 200 216 37 chr17 64042958 64043144 -31229507 + RMER17C LTR ERVK 177 410 0 6 1073 186 43 0 0 chr17 64043265 64043288 -31229363 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1073 1223 22 0 0 chr17 64043288 64043426 -31229225 - B1_Mus1 SINE Alu -10 138 1 6 1073 763 201 0 7 chr17 64043434 64043569 -31229082 - B1_Mur1 SINE Alu -5 144 11 6 1073 1187 35 0 27 chr17 64043604 64043753 -31228898 + B1_Mus2 SINE Alu 1 145 -2 7 1073 326 338 97 75 chr17 64044377 64044748 -31227903 - MTEa LTR MaLR 0 379 1 7 1073 30 0 0 0 chr17 64044989 64045019 -31227632 + AT_rich Low_complexity Low_complexity 1 30 0 7 1073 542 87 0 12 chr17 64045036 64045118 -31227533 + (TG)n Simple_repeat Simple_repeat 2 82 0 7 1073 228 250 0 0 chr17 64045118 64045162 -31227489 - B3 SINE B2 -64 152 109 7 1073 846 294 20 48 chr17 64045293 64045586 -31227065 + B4 SINE B4 2 286 -6 7 1073 250 268 29 49 chr17 64046024 64046126 -31226525 - RSINE1 SINE B4 -14 151 52 7 1073 300 307 121 59 chr17 64046368 64046690 -31225961 + HAL1 LINE L1 52 393 -2114 7 1073 224 243 13 39 chr17 64046907 64046984 -31225667 + GA-rich Low_complexity Low_complexity 3 77 0 7 1073 609 157 87 169 chr17 64047023 64047207 -31225444 - URR1A DNA MER1_type -57 169 1 7 1073 24 0 0 0 chr17 64047954 64047978 -31224673 + AT_rich Low_complexity Low_complexity 1 24 0 8 1073 3438 44 0 128 chr17 64048069 64048569 -31224082 + RLTR10C LTR ERVK 1 436 0 8 1073 290 277 0 113 chr17 64048630 64048736 -31223915 - B4A SINE B4 -2 290 197 8 1073 345 311 16 25 chr17 64049059 64049181 -31223470 - RMER5 LTR ERV1 0 534 414 8 1073 373 275 100 67 chr17 64049316 64049585 -31223066 + RMER5 LTR ERV1 113 390 -144 8 1073 256 200 144 39 chr17 64049649 64049720 -31222931 + L1MB7 LINE L1 6070 6145 -39 8 1073 1888 158 55 78 chr17 64049720 64050105 -31222546 + ORR1C1 LTR MaLR 3 378 0 8 1073 256 200 144 39 chr17 64050105 64050137 -31222514 + L1MB7 LINE L1 6146 6184 0 8 1073 189 171 0 0 chr17 64052102 64052137 -31220514 + (TA)n Simple_repeat Simple_repeat 2 36 0 8 1073 587 239 250 6 chr17 64052141 64052305 -31220346 - B3 SINE B2 -11 205 2 8 1073 683 198 0 11 chr17 64052350 64052524 -31220127 + GA-rich Low_complexity Low_complexity 1 172 0 8 1073 1006 237 24 5 chr17 64052740 64052952 -31219699 + B3 SINE B2 1 216 0 9 1073 337 313 97 0 chr17 64053071 64053205 -31219446 - B1F SINE Alu -1 148 2 9 1073 259 326 21 0 chr17 64053205 64053300 -31219351 + L1MD3 LINE L1 6740 6836 -1159 9 1073 2057 194 43 213 chr17 64053335 64054071 -31218580 - RMER19C LTR ERVK 0 611 1 9 1073 940 39 132 8 chr17 64054220 64054349 -31218302 + B1_Mus2 SINE Alu 1 145 -2 9 1073 716 226 8 0 chr17 64056471 64056604 -31216047 + B3A SINE B2 11 144 -54 9 1073 265 329 0 0 chr17 64056595 64056665 -31215986 - RSINE1 SINE B4 -87 78 9 9 1073 1552 172 83 90 chr17 64057015 64057425 -31215226 + MTB_Mm LTR MaLR 1 407 0 9 1073 181 244 0 0 chr17 64057505 64057546 -31215105 - L2b LINE L2 0 3375 3335 9 1073 616 192 56 0 chr17 64058311 64058436 -31214215 + B1_Mur2 SINE Alu 10 141 -8 9 1073 264 291 70 104 chr17 64058829 64058944 -31213707 - MER81 DNA AcHobo 0 114 4 1 1073 234 210 135 56 chr17 64059018 64059077 -31213574 + L1ME2z LINE L1 6308 6372 -72 1 1073 321 89 0 0 chr17 64059077 64059122 -31213529 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1073 234 210 135 56 chr17 64059122 64059188 -31213463 + L1ME2z LINE L1 6373 6443 -1 1 1073 706 224 150 65 chr17 64059438 64059777 -31212874 - RLTR9A LTR ERVK 0 368 1 1 1073 260 247 43 33 chr17 64059840 64059932 -31212719 + HAL1 LINE L1 2171 2263 -244 1 1073 6335 172 24 14 chr17 64060084 64061203 -31211448 - Lx5 LINE L1 -270 6780 5651 1 1073 1181 209 115 0 chr17 64061203 64061438 -31211213 + Lx5 LINE L1 6788 7049 -1 1 1073 214 205 0 0 chr17 64062727 64062766 -31209885 + T-rich Low_complexity Low_complexity 1 39 0 1 1073 474 108 0 0 chr17 64062850 64062924 -31209727 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 1073 21 0 0 0 chr17 64062956 64062977 -31209674 + AT_rich Low_complexity Low_complexity 1 21 0 1 1073 204 97 0 0 chr17 64063021 64063052 -31209599 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1073 486 228 51 26 chr17 64063731 64063848 -31208803 + PB1D9 SINE Alu 1 120 0 1 1073 480 237 59 0 chr17 64063864 64063982 -31208669 + ID_B1 SINE B4 92 216 -8 1 1073 835 200 0 0 chr17 64064412 64064557 -31208094 + B1_Mur4 SINE Alu 2 146 -4 1 1073 198 0 0 0 chr17 64064557 64064579 -31208072 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1 1073 999 198 86 0 chr17 64064608 64064805 -31207846 + B3 SINE B2 2 215 -1 1 1073 27 0 0 0 chr17 64064805 64064832 -31207819 + AT_rich Low_complexity Low_complexity 1 27 0 1 1073 232 332 116 9 chr17 64067001 64067082 -31205569 + L1MC4 LINE L1 6723 6818 -1224 1 1073 255 31 0 0 chr17 64067082 64067114 -31205537 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1 1073 232 332 116 9 chr17 64067114 64067248 -31205403 + L1MC4 LINE L1 6819 6960 -1082 1 1073 234 137 19 38 chr17 64067879 64067932 -31204719 - RSINE1 SINE B4 -72 93 42 1 1073 225 0 0 0 chr17 64069656 64069681 -31202970 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1073 441 0 0 0 chr17 64070983 64071032 -31201619 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1073 562 293 50 121 chr17 64071067 64071347 -31201304 - B4A SINE B4 -26 266 7 1 1073 543 168 38 199 chr17 64073524 64073563 -31199088 + B3A SINE B2 1 39 -159 1 1073 369 0 0 0 chr17 64073563 64073604 -31199047 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 1073 543 168 38 199 chr17 64073604 64073627 -31199024 + B3A SINE B2 40 40 -158 1 1073 5245 76 1 10 chr17 64073627 64074316 -31198335 - L1_Mus2 LINE L1 0 6566 5884 1 1073 718 195 80 11 chr17 64074316 64074492 -31198159 + B3 SINE B2 29 216 0 1 1073 361 190 317 0 chr17 64074690 64074832 -31197819 - MLT1B LTR MaLR -203 187 1 1 1073 314 230 27 0 chr17 64075029 64075103 -31197548 + B3 SINE B2 1 76 -140 1 1073 423 173 0 0 chr17 64077168 64077249 -31195402 + (TA)n Simple_repeat Simple_repeat 2 82 0 1 1073 33 0 0 0 chr17 64077262 64077295 -31195356 + AT_rich Low_complexity Low_complexity 1 33 0 1 1073 660 272 0 13 chr17 64077333 64077486 -31195165 + RSINE1 SINE B4 3 153 -12 1 1073 303 28 0 0 chr17 64077494 64077530 -31195121 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1073 21 0 0 0 chr17 64077596 64077617 -31195034 + AT_rich Low_complexity Low_complexity 1 21 0 1 1073 498 46 0 0 chr17 64077988 64078053 -31194598 + (GA)n Simple_repeat Simple_repeat 1 65 0 1 1073 24 0 0 0 chr17 64078083 64078107 -31194544 + AT_rich Low_complexity Low_complexity 1 24 0 1 1073 2964 138 8 30 chr17 64078107 64078606 -31194045 - Lx4A LINE L1 -2 7056 6569 1 1073 20265 67 3 0 chr17 64078624 64081219 -31191432 + L1_Mm LINE L1 2535 5135 -748 1 1073 5217 54 0 6 chr17 64081388 64082036 -31190615 - L1Md_F2 LINE L1 -1 6581 5938 1 1073 471 35 0 0 chr17 64082616 64082673 -31189978 + (TGG)n Simple_repeat Simple_repeat 1 57 0 1 1073 1107 102 0 0 chr17 64083144 64083291 -31189360 + B1_Mm SINE Alu 1 147 0 1 1073 216 0 0 0 chr17 64083291 64083315 -31189336 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1073 361 206 0 18 chr17 64083426 64083535 -31189116 + (TA)n Simple_repeat Simple_repeat 2 108 0 1 1073 272 211 13 0 chr17 64083577 64083653 -31188998 + (TG)n Simple_repeat Simple_repeat 1 77 0 1 1073 232 250 73 0 chr17 64083670 64083738 -31188913 - tRNA-Ala-GCY_ tRNA tRNA -2 73 1 1 1073 1564 198 124 26 chr17 64083864 64084243 -31188408 - MTC LTR MaLR -5 416 1 1 1073 207 186 0 0 chr17 64084514 64084557 -31188094 + CT-rich Low_complexity Low_complexity 3 45 0 1 1073 1167 88 0 0 chr17 64084557 64084705 -31187946 - B1_Mus1 SINE Alu 0 148 1 1 1073 1602 193 86 23 chr17 64084705 64085055 -31187596 - ORR1D1 LTR MaLR -2 372 1 1 1073 1900 75 50 0 chr17 64085715 64085996 -31186655 + RMER6D LTR ERVK 1 295 -425 1 1073 8691 26 1 0 chr17 64086014 64087095 -31185556 - L1Md_T LINE L1 -2 6580 5499 1 1073 565 206 0 109 chr17 64087095 64087147 -31185504 + RMER6D LTR ERVK 290 341 -379 1 1073 1589 43 0 0 chr17 64087147 64087331 -31185320 + B2_Mm1a SINE B2 2 185 -8 1 1073 565 206 0 109 chr17 64087331 64087345 -31185306 + RMER6D LTR ERVK 342 345 -375 1 1073 935 18 9 0 chr17 64087345 64087458 -31185193 + (GGGAGA)n Simple_repeat Simple_repeat 2 115 0 1 1073 565 209 22 106 chr17 64087458 64087586 -31185065 + RMER6D LTR ERVK 346 488 -202 1 1073 465 296 80 126 chr17 64087608 64088045 -31184606 + RLTR23 LTR ERV1 14 430 0 1 1073 1414 166 12 0 chr17 64088045 64088283 -31184368 + RMER6D LTR ERVK 480 720 0 1 1073 333 0 0 0 chr17 64088478 64088515 -31184136 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1073 891 121 0 0 chr17 64088515 64088654 -31183997 + (GA)n Simple_repeat Simple_repeat 1 140 0 1 1073 198 0 0 0 chr17 64088754 64088776 -31183875 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1073 366 23 0 0 chr17 64089064 64089107 -31183544 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1073 369 0 0 0 chr17 64089297 64089338 -31183313 + (T)n Simple_repeat Simple_repeat 1 41 0 1 1073 966 164 27 11 chr17 64089996 64090181 -31182470 + B2_Mm2 SINE B2 1 188 -7 1 1073 498 229 54 54 chr17 64091053 64091219 -31181432 + ID_B1 SINE B4 8 173 -51 1 1073 2224 87 60 17 chr17 64091620 64091972 -31180679 - IAPLTR1_Mm LTR ERVK 0 367 1 1 134 56318 29 9 2 chr17 64091976 64098401 -31174250 - IAPEz-int LTR ERVK -3 6478 8 1 1074 2224 87 60 17 chr17 64098401 64098753 -31173898 - IAPLTR1_Mm LTR ERVK 0 367 1 1 1074 1285 151 26 48 chr17 64098940 64099169 -31173482 - URR1B DNA MER1_type 0 225 2 1 1074 195 42 0 0 chr17 64099968 64099992 -31172659 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 1074 881 228 72 0 chr17 64099993 64100186 -31172465 - B3 SINE B2 -9 207 1 1 1074 618 222 106 50 chr17 64101022 64101202 -31171449 + B3 SINE B2 2 191 -25 1 1074 3459 87 147 4 chr17 64101238 64101747 -31170904 + MT2B2 LTR ERVL 3 584 0 1 1074 903 265 0 5 chr17 64101782 64102002 -31170649 - Lx6 LINE L1 -146 7314 7096 1 1074 2319 212 27 58 chr17 64102005 64102552 -31170099 - Lx6 LINE L1 -472 6988 6459 1 1074 5953 154 16 12 chr17 64102568 64103618 -31169033 - L1_Mur3 LINE L1 -8 5872 4819 1 1074 364 111 0 0 chr17 64103724 64103778 -31168873 - L1_Mur3 LINE L1 -1074 4806 4753 1 1074 24 0 0 0 chr17 64103778 64103802 -31168849 + AT_rich Low_complexity Low_complexity 1 24 0 1 1074 2707 232 13 6 chr17 64104025 64104553 -31168098 + RMER1B Other Other 1 532 -534 1 1074 407 195 0 13 chr17 64104557 64104635 -31168016 + PB1 SINE Alu 23 99 -28 1 1074 461 162 0 12 chr17 64105229 64105310 -31167341 - RMER1A Other Other -10 1020 941 1 1074 599 248 18 128 chr17 64106038 64106265 -31166386 - MER20 DNA MER1_type -5 214 13 1 1074 336 308 95 84 chr17 64106273 64106546 -31166105 + B4 SINE B4 1 276 -16 1 1074 353 75 19 0 chr17 64106570 64106623 -31166028 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1074 204 216 0 56 chr17 64106634 64106688 -31165963 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1074 182 156 0 22 chr17 64107816 64107862 -31164789 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1074 196 309 49 42 chr17 64108123 64108265 -31164386 + MIR SINE MIR 60 202 -60 1 1074 339 89 0 0 chr17 64108876 64108932 -31163719 + (A)n Simple_repeat Simple_repeat 1 56 0 1 1074 442 179 159 9 chr17 64109605 64109712 -31162939 - L1MC1 LINE L1 0 6333 6211 1 1074 2474 101 42 18 chr17 64110072 64110455 -31162196 + ORR1B1 LTR MaLR 1 392 -2 1 1074 217 200 0 0 chr17 64110476 64110511 -31162140 + polypurine Low_complexity Low_complexity 1 35 0 1 1074 208 283 0 19 chr17 64110544 64110598 -31162053 + GA-rich Low_complexity Low_complexity 1 53 0 1 1074 2908 33 0 3 chr17 64110997 64111335 -31161316 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 1074 30477 26 16 11 chr17 64111335 64114878 -31157773 + IAPEz-int LTR ERVK 8 3567 -2914 1 1074 6063 30 3 7 chr17 64114864 64115569 -31157082 + IAPEz-int LTR ERVK 5780 6481 0 1 1074 2908 33 0 3 chr17 64115569 64115907 -31156744 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 1074 224 217 0 0 chr17 64116578 64116638 -31156013 + A-rich Low_complexity Low_complexity 1 60 0 1 1074 318 245 98 0 chr17 64116909 64117011 -31155640 + B1F SINE Alu 28 139 -10 1 1074 372 313 89 36 chr17 64117330 64117555 -31155096 + HAL1 LINE L1 1409 1645 -862 1 1074 325 266 78 59 chr17 64117986 64118211 -31154440 - MTEb LTR MaLR -9 370 118 1 1074 8202 47 0 3 chr17 64118856 64119836 -31152815 + L1_Mus2 LINE L1 5588 6564 -2 1 1074 346 246 50 58 chr17 64120796 64120917 -31151734 + RLTR23 LTR ERV1 311 430 0 1 1074 351 0 0 0 chr17 64120998 64121037 -31151614 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1074 247 241 0 0 chr17 64121050 64121104 -31151547 - B1_Mur1 SINE Alu -5 144 91 1 1074 712 219 41 107 chr17 64121207 64121524 -31151127 - RMER17C LTR ERVK -114 296 1 1 1074 5671 200 75 42 chr17 64122170 64122392 -31150259 + Lx7 LINE L1 4401 4630 -1250 1 1074 222 37 0 0 chr17 64122392 64122419 -31150232 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1074 7394 209 76 37 chr17 64122419 64125146 -31147505 + Lx7 LINE L1 4631 7460 -236 1 1074 450 120 0 0 chr17 64125146 64125221 -31147430 + (TATG)n Simple_repeat Simple_repeat 4 78 0 1 1074 7394 217 78 34 chr17 64125221 64125247 -31147404 + Lx7 LINE L1 7461 7485 -211 1 1074 859 151 0 20 chr17 64125251 64125400 -31147251 + RMER19C LTR ERVK 466 611 0 1 1074 261 0 0 0 chr17 64125412 64125441 -31147210 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 1074 410 208 66 8 chr17 64125441 64125570 -31147081 + Lx7 LINE L1 7578 7696 0 1 1074 300 137 0 0 chr17 64125640 64125691 -31146960 + (AGGGGG)n Simple_repeat Simple_repeat 3 53 0 1 1074 284 161 113 0 chr17 64125710 64125772 -31146879 - RSINE1 SINE B4 -37 128 60 1 1074 400 219 259 31 chr17 64125998 64126191 -31146460 - MTD LTR MaLR -68 351 115 1 1074 1235 307 50 12 chr17 64126192 64126594 -31146057 - Lx8 LINE L1 -145 7328 6912 2 1074 423 0 0 0 chr17 64126594 64126641 -31146010 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1074 210 255 0 18 chr17 64126733 64126789 -31145862 + PB1D9 SINE Alu 53 107 -13 2 1074 197 33 0 32 chr17 64126789 64126820 -31145831 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 2 1074 242 311 101 6 chr17 64127103 64127271 -31145380 - L1ME3B LINE L1 -262 5978 5795 2 1074 235 304 141 0 chr17 64127457 64127549 -31145102 - L1ME3B LINE L1 -593 5647 5543 2 1074 556 252 0 77 chr17 64127721 64127805 -31144846 + ID_B1 SINE B4 82 158 -66 2 1074 2299 92 6 58 chr17 64127805 64128150 -31144501 + ORR1A2 LTR MaLR 1 327 0 2 1074 556 252 0 77 chr17 64128150 64128220 -31144431 + ID_B1 SINE B4 159 224 0 2 1074 1177 199 12 109 chr17 64129576 64129897 -31142754 + ORR1D1 LTR MaLR 8 297 -77 2 1074 198 118 0 0 chr17 64129930 64129964 -31142687 + (T)n Simple_repeat Simple_repeat 1 34 0 2 1074 861 204 114 139 chr17 64130371 64130758 -31141893 - MTC LTR MaLR 0 379 3 2 1074 1344 87 22 0 chr17 64130759 64130943 -31141708 + B2_Mm2 SINE B2 4 191 -4 2 1074 739 263 192 91 chr17 64130959 64131646 -31141005 - MTC-int LTR MaLR -193 1387 721 2 1074 1541 189 81 65 chr17 64132700 64132890 -31139761 - MTC LTR MaLR 0 421 250 2 1074 1280 14 7 0 chr17 64132890 64133036 -31139615 - B1_Mus2 SINE Alu 0 147 1 2 1074 1541 189 81 65 chr17 64133036 64133242 -31139409 - MTC LTR MaLR -172 249 19 2 1074 861 184 132 54 chr17 64133509 64133751 -31138900 + ORR1D1 LTR MaLR 8 268 -106 2 1074 369 333 21 7 chr17 64133969 64134114 -31138537 - MIRb SINE MIR -34 234 88 2 1074 229 315 65 52 chr17 64134334 64134488 -31138163 - MER5A1 DNA MER1_type -4 162 7 2 1074 425 199 0 8 chr17 64134579 64134711 -31137940 + (CA)n Simple_repeat Simple_repeat 2 132 0 2 1074 654 180 19 15 chr17 64134725 64134996 -31137655 + (CA)n Simple_repeat Simple_repeat 1 272 0 2 1074 385 292 35 0 chr17 64134999 64135112 -31137539 + RSINE1 SINE B4 18 134 -31 2 1074 255 293 143 6 chr17 64135703 64135878 -31136773 + MIR SINE MIR 64 262 0 2 1074 705 174 36 0 chr17 64135881 64136019 -31136632 + B3A SINE B2 9 151 -47 2 1074 2085 168 38 47 chr17 64136318 64136743 -31135908 - MTC LTR MaLR 0 421 1 2 1074 372 345 28 0 chr17 64136783 64136928 -31135723 + ORR1E LTR MaLR 1 149 -210 2 1074 628 276 128 34 chr17 64137057 64137496 -31135155 - RLTR12B LTR ERVK -10 518 39 2 1074 336 247 65 60 chr17 64137613 64137783 -31134868 - Kanga1 DNA Tc2 -66 1679 1509 2 1074 396 354 66 112 chr17 64137783 64138012 -31134639 + MER119 DNA MER1_type 2 237 -346 2 1074 815 154 35 14 chr17 64138012 64138157 -31134494 + B1_Mur2 SINE Alu 2 149 0 2 1074 396 354 66 112 chr17 64138157 64138293 -31134358 + MER119 DNA MER1_type 238 350 -233 2 1074 247 325 137 58 chr17 64138324 64138602 -31134049 - Kanga1 DNA Tc2 -216 1529 1230 2 1074 218 228 0 34 chr17 64138652 64138711 -31133940 + G-rich Low_complexity Low_complexity 2 58 0 2 1074 465 19 0 0 chr17 64138739 64138793 -31133858 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 2 1074 221 336 139 17 chr17 64139510 64139625 -31133026 + MIR SINE MIR 55 183 -79 2 1074 482 158 39 29 chr17 64139640 64139744 -31132907 + B1_Mur2 SINE Alu 40 144 -5 2 1074 1951 145 47 6 chr17 64140380 64140740 -31131911 + MTC LTR MaLR 44 418 -3 2 1074 544 27 27 0 chr17 64140740 64140814 -31131837 + (CA)n Simple_repeat Simple_repeat 2 77 0 2 1074 180 0 0 0 chr17 64140820 64140840 -31131811 + (CCA)n Simple_repeat Simple_repeat 1 20 0 2 1074 255 61 0 0 chr17 64141810 64141843 -31130808 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1074 2772 58 5 57 chr17 64142141 64142368 -31130283 - MTA_Mm LTR MaLR 0 396 192 2 1074 4636 50 0 0 chr17 64142368 64142929 -31129722 - L1Md_F2 LINE L1 0 6582 6022 2 1074 2772 58 5 57 chr17 64142929 64143119 -31129532 - MTA_Mm LTR MaLR -205 191 1 2 1074 224 81 54 0 chr17 64144123 64144160 -31128491 + (TTCC)n Simple_repeat Simple_repeat 3 41 0 2 1074 829 181 11 0 chr17 64144160 64144337 -31128314 + CT-rich Low_complexity Low_complexity 2 180 0 2 1074 330 230 14 0 chr17 64144365 64144439 -31128212 - PB1D7 SINE Alu 0 120 46 2 1074 249 300 84 21 chr17 64144449 64144591 -31128060 - MIRb SINE MIR -75 187 32 2 1074 1715 198 56 14 chr17 64145080 64145439 -31127212 - ORR1D1 LTR MaLR 0 374 1 2 1074 640 107 0 19 chr17 64146173 64146278 -31126373 + MTB_Mm LTR MaLR 305 407 0 2 1074 2458 92 3 0 chr17 64146388 64146713 -31125938 - ORR1A2 LTR MaLR -1 326 1 2 1074 32 0 0 0 chr17 64147453 64147485 -31125166 + AT_rich Low_complexity Low_complexity 1 32 0 2 1074 781 209 34 17 chr17 64147544 64147719 -31124932 - MTEa LTR MaLR -201 178 1 2 1074 221 0 35 0 chr17 64147771 64147800 -31124851 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1074 28 0 0 0 chr17 64149020 64149048 -31123603 + AT_rich Low_complexity Low_complexity 1 28 0 2 1074 722 269 65 0 chr17 64149264 64149450 -31123201 + B3A SINE B2 1 198 0 2 1074 292 43 0 42 chr17 64150683 64150731 -31121920 + (CCCCCT)n Simple_repeat Simple_repeat 3 48 0 2 1074 21 0 0 0 chr17 64151592 64151613 -31121038 + AT_rich Low_complexity Low_complexity 1 21 0 2 1074 183 146 0 0 chr17 64153582 64153623 -31119028 + (T)n Simple_repeat Simple_repeat 1 41 0 2 1074 1197 48 0 7 chr17 64153623 64153771 -31118880 - B1_Mm SINE Alu 0 147 1 2 1074 3209 63 5 0 chr17 64154285 64154683 -31117968 + MTB LTR MaLR 1 400 0 2 1074 477 163 0 0 chr17 64155069 64155161 -31117490 + CT-rich Low_complexity Low_complexity 3 94 0 2 1074 626 181 17 0 chr17 64155223 64155339 -31117312 + B1_Mur1 SINE Alu 24 141 -8 2 1074 865 231 233 7 chr17 64155475 64155763 -31116888 - MTD LTR MaLR -20 399 47 2 1074 235 247 91 52 chr17 64156479 64156556 -31116095 - MTD LTR MaLR -279 80 1 2 1074 277 271 76 7 chr17 64156763 64156908 -31115743 - MER67D LTR ERV1 -334 180 26 2 1074 264 333 57 9 chr17 64157124 64157230 -31115421 - MamGypLTR1d LTR Gypsy -296 517 407 2 1074 228 320 45 64 chr17 64158432 64158542 -31114109 + MER81 DNA AcHobo 7 114 0 2 1074 315 224 0 50 chr17 64158771 64158851 -31113800 + ID_B1 SINE B4 86 161 -63 2 1074 285 305 28 37 chr17 64158851 64158876 -31113775 + PB1D10 SINE Alu 5 108 -9 2 1074 849 127 0 0 chr17 64158974 64159100 -31113551 + B1_Mus1 SINE Alu 2 127 -21 2 1074 205 27 26 51 chr17 64159119 64159158 -31113493 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2 1074 213 39 0 0 chr17 64159308 64159334 -31113317 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 1074 635 308 53 61 chr17 64159383 64159743 -31112908 + MLT1A LTR MaLR 5 361 -13 2 1074 1934 148 12 58 chr17 64159941 64160286 -31112365 - ORR1A4 LTR MaLR 0 329 1 2 1074 229 370 102 12 chr17 64160415 64160582 -31112069 + MLT1L LTR MaLR 173 354 -256 2 1074 200 116 70 0 chr17 64161204 64161247 -31111404 + (TTAAA)n Simple_repeat Simple_repeat 5 50 0 2 1074 326 139 19 47 chr17 64162651 64162757 -31109894 + (TCTCTG)n Simple_repeat Simple_repeat 6 108 0 2 1074 227 330 78 36 chr17 64162774 64162966 -31109685 - MTEa LTR MaLR -13 366 167 2 1074 339 299 52 65 chr17 64163038 64163192 -31109459 - MTEa LTR MaLR -227 152 1 2 1074 393 278 50 86 chr17 64163681 64163916 -31108735 + L1MEc LINE L1 535 757 -5643 2 1074 1270 87 41 0 chr17 64163916 64164088 -31108563 + B2_Mm2 SINE B2 2 180 -15 2 1074 1043 38 8 0 chr17 64164088 64164220 -31108431 + (GAAA)n Simple_repeat Simple_repeat 3 135 0 2 1074 393 278 50 86 chr17 64164220 64164286 -31108365 + L1MEc LINE L1 758 825 -5575 2 1074 442 257 41 72 chr17 64164883 64165117 -31107534 + L1MEc LINE L1 1203 1469 -4946 2 1074 440 296 256 32 chr17 64165117 64165528 -31107123 + MLT1D LTR MaLR 3 505 0 2 1074 256 291 34 116 chr17 64165528 64165585 -31107066 + L1MEc LINE L1 1470 1519 -4896 2 1074 495 0 0 0 chr17 64165964 64166019 -31106632 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1074 1312 46 17 0 chr17 64167011 64167186 -31105465 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 2 1074 223 246 45 15 chr17 64167190 64167233 -31105418 + polypyrimidine Low_complexity Low_complexity 24 68 0 2 1074 1368 105 21 0 chr17 64167233 64167423 -31105228 - B2_Mm2 SINE B2 0 195 2 2 1074 223 246 45 15 chr17 64167423 64167445 -31105206 + polypyrimidine Low_complexity Low_complexity 1 23 0 2 1074 229 231 0 0 chr17 64168062 64168114 -31104537 + L1MEc LINE L1 1810 1861 -4539 2 1074 1726 51 28 0 chr17 64169123 64169337 -31103314 + L1_Mus1 LINE L1 6348 6567 0 2 1074 482 202 0 0 chr17 64170490 64170584 -31102067 + RMER6C LTR ERVK 597 690 0 2 1074 1780 194 11 8 chr17 64171698 64172056 -31100595 + RLTR30 LTR ERV1 2 360 -19 2 1074 518 301 108 35 chr17 64172093 64172351 -31100300 + ORR1E LTR MaLR 64 340 -19 2 1074 364 243 14 0 chr17 64172611 64172685 -31099966 - PB1D9 SINE Alu -45 75 1 2 1074 1414 272 84 24 chr17 64172842 64173392 -31099259 + Lx7 LINE L1 6719 7301 -395 2 1074 263 233 0 0 chr17 64173410 64173483 -31099168 + T-rich Low_complexity Low_complexity 1 73 0 2 1074 912 153 117 48 chr17 64173592 64173798 -31098853 + MTD LTR MaLR 198 417 -2 2 1074 222 118 0 0 chr17 64175003 64175037 -31097614 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 2 1074 231 36 0 0 chr17 64175062 64175090 -31097561 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 1074 238 219 127 45 chr17 64175860 64175970 -31096681 + LTR16E1 LTR ERVL 417 535 -3 2 1074 378 0 0 0 chr17 64176009 64176051 -31096600 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 2 1074 278 326 100 50 chr17 64176665 64176774 -31095877 + MLT2D LTR ERVL 54 169 -245 2 1074 2381 93 6 0 chr17 64176774 64177097 -31095554 + ORR1A2 LTR MaLR 3 327 0 2 1074 278 326 100 50 chr17 64177097 64177226 -31095425 + MLT2D LTR ERVL 170 304 -110 2 1074 887 274 9 0 chr17 64177422 64177634 -31095017 + B3 SINE B2 1 214 -2 2 1074 185 65 32 0 chr17 64177816 64177847 -31094804 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 2 1074 525 274 206 25 chr17 64177858 64178101 -31094550 - Lx8 LINE L1 -132 7341 7055 2 1074 2263 62 0 7 chr17 64179791 64180081 -31092570 - L1Md_F2 LINE L1 -1 6581 6294 2 1074 404 236 67 76 chr17 64180159 64180278 -31092373 + RSINE1 SINE B4 3 120 -45 2 1074 399 41 0 0 chr17 64180282 64180331 -31092320 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1074 597 194 19 0 chr17 64180401 64180509 -31092142 - PB1D9 SINE Alu -6 114 5 2 1074 567 283 29 24 chr17 64180704 64180932 -31091719 - Kanga11a DNA Tc2 -394 576 337 2 1074 327 146 0 0 chr17 64181180 64181235 -31091416 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 3 1074 1609 90 4 0 chr17 64181303 64181547 -31091104 - MusHAL1 LINE L1 -632 2080 1836 3 1074 356 133 2 0 chr17 64181548 64181608 -31091043 - B3A SINE B2 -131 62 2 3 1074 226 330 64 0 chr17 64182317 64182411 -31090240 - L1ME4a LINE L1 -27 6097 5998 3 1074 490 273 25 74 chr17 64183543 64183705 -31088946 - RSINE1 SINE B4 -1 164 11 3 1074 183 129 0 0 chr17 64184027 64184058 -31088593 + (G)n Simple_repeat Simple_repeat 1 31 0 3 1074 297 261 88 88 chr17 64185391 64185416 -31087235 - B2_Mm2 SINE B2 -14 181 161 3 1074 336 24 0 0 chr17 64185416 64185457 -31087194 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1074 518 261 88 88 chr17 64185457 64185612 -31087039 - B3A SINE B2 -34 164 1 3 1074 648 187 16 16 chr17 64185723 64185848 -31086803 + B1F2 SINE Alu 2 126 -23 3 1074 282 337 51 51 chr17 64186370 64186548 -31086103 + MTEb LTR MaLR 202 379 0 3 1074 294 288 0 70 chr17 64188030 64188116 -31084535 + PB1D9 SINE Alu 2 81 -39 3 1074 450 0 0 0 chr17 64188116 64188166 -31084485 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1074 2212 111 9 3 chr17 64188476 64188801 -31083850 - ORR1A2 LTR MaLR 0 327 1 3 1074 339 313 75 117 chr17 64189090 64189304 -31083347 - MLT1A0 LTR MaLR -5 360 145 3 1074 501 254 84 94 chr17 64189304 64189480 -31083171 + B3 SINE B2 1 176 -40 3 1074 551 15 15 0 chr17 64189480 64189548 -31083103 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 3 1074 501 254 84 94 chr17 64189548 64189584 -31083067 + B3 SINE B2 177 211 -5 3 1074 339 313 75 117 chr17 64189584 64189745 -31082906 - MLT1A0 LTR MaLR -221 144 1 3 1074 299 282 167 30 chr17 64190018 64190288 -31082363 + L1M5 LINE L1 4808 5114 -1032 3 1074 5153 52 0 0 chr17 64191861 64192499 -31080152 - L1_Mm LINE L1 -1823 4060 3423 3 1074 6740 54 7 7 chr17 64192500 64193339 -31079312 + L1Md_F2 LINE L1 5743 6581 -1 3 1074 222 330 34 0 chr17 64193528 64193616 -31079035 - B3A SINE B2 -80 118 28 3 1074 772 242 15 15 chr17 64193650 64193847 -31078804 + MTD LTR MaLR 18 214 -205 3 1074 1848 72 8 4 chr17 64193898 64194165 -31078486 + Lx2A LINE L1 6741 7008 0 3 1074 1041 46 0 0 chr17 64194252 64194383 -31078268 + (TTTC)n Simple_repeat Simple_repeat 2 132 0 3 1074 769 203 50 29 chr17 64194757 64194973 -31077678 + MTD LTR MaLR 173 405 -14 3 1074 2685 58 6 44 chr17 64195258 64195543 -31077108 + ORR1A1 LTR MaLR 1 280 -66 3 1074 207 0 0 0 chr17 64195543 64195566 -31077085 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1074 2685 58 6 44 chr17 64195566 64195640 -31077011 + ORR1A1 LTR MaLR 281 346 0 3 1074 2739 141 58 2 chr17 64196084 64196517 -31076134 + RMER6B LTR ERVK 3 459 -2 3 1074 242 270 260 8 chr17 64196686 64196813 -31075838 - MER31A LTR ERV1 -138 347 189 3 1074 186 43 0 0 chr17 64196817 64196840 -31075811 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1074 429 301 63 13 chr17 64197119 64197277 -31075374 - B3A SINE B2 -30 168 3 3 1074 310 207 166 12 chr17 64197616 64197714 -31074937 + PB1D10 SINE Alu 17 120 -7 3 1074 24 32 0 0 chr17 64197715 64197746 -31074905 + AT_rich Low_complexity Low_complexity 1 31 0 3 1074 21 0 0 0 chr17 64198475 64198496 -31074155 + AT_rich Low_complexity Low_complexity 1 21 0 3 1074 432 0 0 0 chr17 64199394 64199442 -31073209 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1074 1793 158 93 29 chr17 64200185 64200530 -31072121 - ORR1B2 LTR MaLR 0 367 1 3 1074 208 380 51 0 chr17 64201741 64201878 -31070773 - MIR SINE MIR 0 262 119 3 1074 378 261 21 11 chr17 64201971 64202064 -31070587 + PB1D10 SINE Alu 7 100 -17 3 1074 208 315 25 83 chr17 64202242 64202363 -31070288 + MIR SINE MIR 79 192 -70 3 1074 261 335 81 60 chr17 64202403 64202443 -31070208 - MLT2B2 LTR ERVL -5 510 465 3 1074 486 0 0 0 chr17 64202443 64202497 -31070154 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 1074 751 289 111 48 chr17 64202497 64202937 -31069714 - MT2A LTR ERVL -65 468 1 3 1074 269 302 103 9 chr17 64203040 64203147 -31069504 + PB1D10 SINE Alu 1 117 0 3 1074 567 306 92 57 chr17 64203262 64203598 -31069053 - ORR1E LTR MaLR -11 348 1 3 1074 1088 221 171 7 chr17 64203654 64203964 -31068687 - ORR1D2 LTR MaLR -9 361 1 3 1074 203 189 0 0 chr17 64204327 64204364 -31068287 + (TAA)n Simple_repeat Simple_repeat 1 37 0 3 1074 303 262 126 0 chr17 64204375 64204478 -31068173 - B3A SINE B2 -18 180 65 3 1074 210 118 0 0 chr17 64204564 64204598 -31068053 + (CCA)n Simple_repeat Simple_repeat 1 34 0 3 1074 402 74 0 0 chr17 64205959 64206013 -31066638 + (TTTTA)n Simple_repeat Simple_repeat 2 55 0 3 1074 253 289 19 120 chr17 64206526 64206742 -31065909 - L1MD LINE L1 -878 5268 5075 3 1074 237 33 0 0 chr17 64206947 64206977 -31065674 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 1074 188 86 29 0 chr17 64207111 64207146 -31065505 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 3 1074 279 264 26 50 chr17 64207146 64207312 -31065339 + L1M5 LINE L1 5282 5447 -732 3 1074 357 247 11 45 chr17 64207337 64207426 -31065225 + B1F SINE Alu 26 111 -38 3 1074 267 308 13 0 chr17 64207595 64207673 -31064978 + ID4 SINE ID 2 80 -3 3 1074 332 239 107 27 chr17 64207721 64207833 -31064818 + B4A SINE B4 6 126 -166 3 1074 823 225 60 5 chr17 64207927 64208128 -31064523 + B3 SINE B2 1 212 -4 3 1074 789 200 32 0 chr17 64208507 64208662 -31063989 + Lx8 LINE L1 7083 7242 -231 3 1074 738 175 0 0 chr17 64208714 64208857 -31063794 + (CA)n Simple_repeat Simple_repeat 1 143 0 3 1074 678 224 20 90 chr17 64208889 64209090 -31063561 - B3A SINE B2 -10 188 2 3 1074 21 0 0 0 chr17 64210652 64210673 -31061978 + AT_rich Low_complexity Low_complexity 1 21 0 3 1074 378 0 0 0 chr17 64211203 64211245 -31061406 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1074 787 235 167 3 chr17 64211619 64211901 -31060750 - MER67C LTR ERV1 -66 645 318 3 1074 269 208 0 0 chr17 64212059 64212107 -31060544 - MER67C LTR ERV1 -488 223 176 3 1074 1280 93 11 11 chr17 64215681 64215865 -31056786 - B2_Mm1t SINE B2 -9 184 1 3 1074 426 288 58 26 chr17 64216947 64217136 -31055515 + MIRb SINE MIR 16 210 -58 3 1074 494 202 57 15 chr17 64217222 64217352 -31055299 - ORR1C2 LTR MaLR -2 382 230 3 1074 306 67 0 0 chr17 64217368 64217413 -31055238 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1074 354 61 0 0 chr17 64217412 64217461 -31055190 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 1074 740 232 274 38 chr17 64217502 64217773 -31054878 - Lx9 LINE L1 -1004 6640 6306 3 1074 1123 141 0 22 chr17 64217821 64218002 -31054649 - B2_Mm2 SINE B2 -18 177 1 3 1074 473 252 9 0 chr17 64218902 64219017 -31053634 - PB1D9 SINE Alu 0 120 5 3 1074 312 335 35 23 chr17 64219569 64219740 -31052911 - Tigger12 DNA MER2_type -1243 716 544 3 1074 198 209 0 0 chr17 64219844 64219887 -31052764 + CT-rich Low_complexity Low_complexity 3 45 0 3 1074 364 312 63 75 chr17 64219911 64220202 -31052449 - B4A SINE B4 -17 275 2 3 1074 575 253 34 69 chr17 64220221 64220425 -31052226 - B3A SINE B2 0 198 2 3 1074 847 212 115 5 chr17 64220425 64220624 -31052027 - B4A SINE B4 -60 232 11 3 1074 1773 165 38 22 chr17 64220708 64221074 -31051577 + ORR1D1 LTR MaLR 3 374 0 3 1074 564 187 18 7 chr17 64221095 64221226 -31051425 - RMER1B Other Other -11 1055 911 3 1074 218 298 142 35 chr17 64221478 64221704 -31050947 + L2a LINE L2 2501 2750 -669 3 1074 192 322 81 0 chr17 64221912 64221999 -31050652 + L2a LINE L2 3035 3128 -298 3 1074 714 259 43 76 chr17 64222253 64222554 -31050097 - B4A SINE B4 0 292 2 3 1074 252 269 60 0 chr17 64223058 64223125 -31049526 + ID4_ SINE ID 1 71 -12 3 1074 703 273 11 50 chr17 64224352 64224533 -31048118 + B3A SINE B2 24 197 -1 3 1074 522 194 10 0 chr17 64224686 64224784 -31047867 + B1_Mur1 SINE Alu 46 144 -5 3 134 2498 185 17 66 chr17 64224977 64225567 -31047084 + RLTR31_Mm LTR ERVK 1 561 0 3 1075 512 241 64 0 chr17 64226392 64226533 -31046118 + MER2 DNA MER2_type 86 235 -110 3 1075 373 226 28 0 chr17 64226765 64226871 -31045780 - Lx9 LINE L1 -223 7421 7313 3 1075 793 107 15 0 chr17 64227047 64227178 -31045473 + (GA)n Simple_repeat Simple_repeat 1 133 0 3 1075 231 36 0 0 chr17 64227261 64227289 -31045362 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1075 33 43 0 41 chr17 64227895 64227968 -31044683 + AT_rich Low_complexity Low_complexity 1 70 0 3 1075 462 211 113 8 chr17 64227968 64228075 -31044576 + PB1D9 SINE Alu 2 114 -35 3 1075 321 337 10 10 chr17 64228058 64228160 -31044491 - B3 SINE B2 -67 149 48 3 1075 665 224 170 16 chr17 64228324 64228506 -31044145 - B3 SINE B2 -5 211 2 3 1075 5122 57 19 1 chr17 64228662 64229369 -31043282 - L1Md_F2 LINE L1 0 6582 5863 3 1075 237 283 0 0 chr17 64229417 64229470 -31043181 + CT-rich Low_complexity Low_complexity 1 53 0 3 1075 330 67 0 0 chr17 64229471 64229516 -31043135 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1075 309 213 0 0 chr17 64229534 64229595 -31043056 - B3A SINE B2 -135 63 3 3 1075 782 126 8 32 chr17 64230006 64230129 -31042522 + B1_Mus2 SINE Alu 28 147 0 3 1075 512 332 16 13 chr17 64230259 64230512 -31042139 - MLT1A1 LTR MaLR -2 406 104 3 1075 5104 189 90 21 chr17 64230622 64230701 -31041950 - Lx9 LINE L1 -48 7596 7518 3 1075 351 78 0 0 chr17 64230701 64230752 -31041899 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1075 5104 189 90 21 chr17 64230752 64231880 -31040771 - Lx9 LINE L1 -127 7517 6307 3 1075 946 213 81 36 chr17 64231991 64232298 -31040353 - Lx9 LINE L1 -1598 6046 5735 3 1075 481 202 55 10 chr17 64232367 64232551 -31040100 - B3 SINE B2 -1 194 1 3 1075 28 86 0 0 chr17 64232557 64232627 -31040024 + AT_rich Low_complexity Low_complexity 1 70 0 3 1075 680 275 0 0 chr17 64232874 64233041 -31039610 - Lx8 LINE L1 -300 7173 7007 4 1075 424 165 512 8 chr17 64233784 64233911 -31038740 - B2_Mm2 SINE B2 -4 191 1 4 1075 607 202 46 0 chr17 64233918 64234027 -31038624 + B1_Mur2 SINE Alu 35 148 -1 4 1075 195 100 0 0 chr17 64234046 64234076 -31038575 + (CATA)n Simple_repeat Simple_repeat 2 31 0 4 1075 451 270 78 23 chr17 64234145 64234274 -31038377 - ID_B1 SINE B4 -2 222 87 4 1075 469 268 69 64 chr17 64234724 64234927 -31037724 + ID_B1 SINE B4 2 205 -19 4 1075 596 293 46 6 chr17 64235039 64235214 -31037437 - B3 SINE B2 -34 182 1 4 1075 1148 61 0 7 chr17 64235330 64235478 -31037173 + B1_Mus1 SINE Alu 1 147 -1 4 1075 198 0 0 0 chr17 64235478 64235500 -31037151 + (CCAA)n Simple_repeat Simple_repeat 2 23 0 4 1075 701 237 137 17 chr17 64235684 64236014 -31036637 - MTD LTR MaLR -1 418 18 4 1075 1045 295 61 36 chr17 64236136 64236498 -31036153 + MTEa LTR MaLR 1 371 -8 4 1075 428 159 174 43 chr17 64236957 64237095 -31035556 - Lx9 LINE L1 -1 7643 7488 4 1075 262 22 0 82 chr17 64237400 64237449 -31035202 + (TTTTTG)n Simple_repeat Simple_repeat 2 46 0 4 1075 549 128 8 46 chr17 64237517 64237648 -31035003 - L1_Mus3 LINE L1 -3 6635 6510 4 1075 311 245 91 85 chr17 64237648 64237813 -31034838 - L1MDb LINE L1 -1027 5379 5214 4 1075 397 128 47 16 chr17 64237953 64238080 -31034571 + (TG)n Simple_repeat Simple_repeat 1 131 0 4 1075 601 285 125 18 chr17 64238257 64238801 -31033850 - L1MDb LINE L1 -5090 1319 718 4 1075 2647 212 144 11 chr17 64239056 64239749 -31032902 - RLTR40 LTR ERVK -32 785 1 4 1075 294 29 0 0 chr17 64240450 64240485 -31032166 + (CAA)n Simple_repeat Simple_repeat 1 35 0 4 1075 316 194 26 77 chr17 64240932 64241010 -31031641 + ID4_ SINE ID 8 81 -2 4 1075 330 26 0 0 chr17 64241431 64241470 -31031181 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1075 199 206 41 0 chr17 64241494 64241591 -31031060 + (CAGA)n Simple_repeat Simple_repeat 4 104 0 4 1075 675 286 48 31 chr17 64241806 64242098 -31030553 - L1MB7 LINE L1 -30 6154 5858 4 1075 471 303 118 26 chr17 64242098 64242369 -31030282 - L1MB7 LINE L1 -1549 4597 4302 4 1075 638 327 70 85 chr17 64242387 64242718 -31029933 - ORR1E LTR MaLR -15 344 19 4 1075 233 279 67 67 chr17 64242803 64242856 -31029795 - L1MB7 LINE L1 -1927 4219 4170 4 1075 460 249 115 28 chr17 64242856 64243038 -31029613 - B3A SINE B2 0 198 1 4 1075 233 279 67 67 chr17 64243038 64243149 -31029502 - L1MB7 LINE L1 -1977 4169 4055 4 1075 1019 136 155 0 chr17 64243148 64243354 -31029297 - Lx3C LINE L1 -60 6916 6679 4 1075 2611 70 82 10 chr17 64243974 64244366 -31028285 - BGLII LTR ERVK -1 420 1 4 1075 297 68 0 0 chr17 64245257 64245301 -31027350 + (CCAA)n Simple_repeat Simple_repeat 2 45 0 4 1075 620 301 60 26 chr17 64245841 64246110 -31026541 - B4A SINE B4 -14 278 1 4 1075 235 217 87 0 chr17 64246310 64246356 -31026295 - B1_Mur4 SINE Alu -9 141 92 4 1075 327 281 68 6 chr17 64246507 64246668 -31025983 + L1M2 LINE L1 4841 5011 -1132 4 1075 300 200 28 14 chr17 64246879 64246950 -31025701 - ID4_ SINE ID -10 73 2 4 1075 327 210 76 0 chr17 64247037 64247156 -31025495 - L1MEc LINE L1 -5602 798 671 4 1075 249 286 35 18 chr17 64247310 64247424 -31025227 - L1MEc LINE L1 -5910 490 375 4 1075 21 0 0 0 chr17 64247846 64247867 -31024784 + AT_rich Low_complexity Low_complexity 1 21 0 4 1075 369 308 97 71 chr17 64247903 64248172 -31024479 + B4A SINE B4 2 277 -15 4 1075 270 344 53 46 chr17 64248208 64248339 -31024312 - B4A SINE B4 -123 169 38 4 1075 317 337 93 36 chr17 64248436 64248630 -31024021 - L1MEc LINE L1 -5992 328 124 4 1075 329 284 56 69 chr17 64248787 64249003 -31023648 - L1MC LINE L1 -2152 5730 5518 4 1075 26 0 0 0 chr17 64249115 64249141 -31023510 + AT_rich Low_complexity Low_complexity 1 26 0 4 1075 704 285 0 0 chr17 64249168 64249347 -31023304 - B3A SINE B2 -16 182 4 4 1075 23 78 0 0 chr17 64249639 64249690 -31022961 + AT_rich Low_complexity Low_complexity 1 51 0 4 1075 261 308 22 0 chr17 64249704 64249795 -31022856 + Tigger9b DNA MER2_type 2 94 -530 4 1075 310 384 94 0 chr17 64249814 64250080 -31022571 + Tigger9b DNA MER2_type 125 415 -209 4 1075 257 382 53 0 chr17 64250119 64250250 -31022401 + Tigger9b DNA MER2_type 481 618 -6 4 1075 593 234 154 0 chr17 64251024 64251199 -31021452 - B3 SINE B2 -13 203 2 4 1075 21 36 0 0 chr17 64251586 64251614 -31021037 + AT_rich Low_complexity Low_complexity 1 28 0 4 1075 742 219 0 0 chr17 64252073 64252210 -31020441 - ID_B1 SINE B4 0 224 88 4 1075 250 276 9 95 chr17 64252115 64252231 -31020420 - MT2B LTR ERVL -344 257 152 4 1075 2327 231 115 13 chr17 64252491 64253197 -31019454 - RCHARR1 DNA MER1_type 0 974 197 4 1075 11976 122 25 11 chr17 64253371 64256034 -31016617 + L1_Mur1 LINE L1 682 3368 -2518 4 1075 620 259 14 7 chr17 64256175 64256323 -31016328 - B1F SINE Alu 0 149 1 4 1075 255 313 51 51 chr17 64256914 64257059 -31015592 - Kanga1 DNA Tc2 -2 1743 1594 4 1075 970 203 34 24 chr17 64257059 64257266 -31015385 + B3 SINE B2 2 210 -6 4 1075 241 313 51 51 chr17 64257266 64257295 -31015356 - Kanga1 DNA Tc2 -149 1596 1569 4 1075 279 0 0 0 chr17 64257299 64257330 -31015321 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1075 322 171 98 36 chr17 64257865 64257961 -31014690 - B1_Mur3 SINE Alu -1 119 29 4 1075 239 167 62 0 chr17 64257982 64258030 -31014621 + B1_Mus1 SINE Alu 5 55 -93 4 1075 244 263 42 10 chr17 64258037 64258133 -31014518 - L1M2 LINE L1 -685 5627 5529 4 1075 264 247 0 31 chr17 64258140 64258236 -31014415 - L1_Mur3 LINE L1 -1539 4341 4249 4 1075 277 248 88 29 chr17 64258247 64258384 -31014267 - Kanga1 DNA Tc2 -422 1323 1179 4 1075 753 264 40 5 chr17 64258732 64258930 -31013721 + B3 SINE B2 1 205 -11 4 1075 211 194 0 0 chr17 64259046 64259082 -31013569 + CT-rich Low_complexity Low_complexity 1 36 0 4 1075 891 294 48 12 chr17 64259185 64259668 -31012983 - L1MA6 LINE L1 -1572 5901 5430 4 1075 238 182 104 15 chr17 64259928 64259995 -31012656 - L1MA6 LINE L1 -619 5228 5156 4 1075 540 215 146 5 chr17 64260096 64260302 -31012349 - Lx9 LINE L1 -8 7636 7402 4 1075 400 223 10 0 chr17 64260481 64260584 -31012067 + Lx9 LINE L1 7091 7194 -450 4 1075 1270 84 7 0 chr17 64261802 64262087 -31010564 + (TCCC)n Simple_repeat Simple_repeat 1 286 0 4 1075 501 185 0 0 chr17 64262246 64262365 -31010286 + (TG)n Simple_repeat Simple_repeat 1 119 0 4 1075 588 275 58 13 chr17 64262367 64262552 -31010099 - B3A SINE B2 -15 201 2 4 1075 615 284 149 10 chr17 64262555 64262843 -31009808 + MER82 DNA MER2_type 1 328 -325 4 1075 605 272 76 12 chr17 64266197 64266446 -31006205 - Lx8 LINE L1 -4 7469 7205 4 1075 283 267 0 0 chr17 64266466 64266552 -31006099 - Lx8 LINE L1 -389 7084 6999 4 1075 634 286 86 0 chr17 64266681 64266821 -31005830 + B3A SINE B2 1 152 -46 4 1075 446 201 10 16 chr17 64266833 64267035 -31005616 + (CA)n Simple_repeat Simple_repeat 1 200 0 4 1075 742 162 59 0 chr17 64267282 64267418 -31005233 - B1_Mus1 SINE Alu 0 148 5 4 1075 27 81 0 0 chr17 64267895 64267957 -31004694 + AT_rich Low_complexity Low_complexity 1 62 0 4 1075 24 85 0 0 chr17 64268043 64268102 -31004549 + AT_rich Low_complexity Low_complexity 1 59 0 4 1075 362 253 46 0 chr17 64268809 64268896 -31003755 + PB1D10 SINE Alu 26 116 -1 4 1075 5614 94 18 4 chr17 64269032 64270542 -31002109 - L1VL2 LINE L1 -1789 1826 293 4 1075 591 214 17 26 chr17 64271825 64271940 -31000711 + B1_Mur1 SINE Alu 29 142 -7 4 1075 187 31 62 0 chr17 64272395 64272427 -31000224 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1075 189 351 77 26 chr17 64273114 64273269 -30999382 - MIRc SINE MIR -14 254 92 4 1075 640 302 36 70 chr17 64273713 64274015 -30998636 - B4A SINE B4 0 292 1 4 1075 26 50 0 0 chr17 64274142 64274182 -30998469 + AT_rich Low_complexity Low_complexity 1 40 0 4 1075 245 255 418 7 chr17 64275041 64275187 -30997464 + MER20 DNA MER1_type 2 207 -12 4 1075 5523 68 35 0 chr17 64275347 64276110 -30996541 - L1_Mus1 LINE L1 0 6567 5817 4 1075 217 333 17 0 chr17 64276500 64276560 -30996091 - ID4 SINE ID -3 80 20 4 1075 378 291 50 34 chr17 64276561 64276746 -30995905 - MTD LTR MaLR -2 417 168 4 1075 562 261 329 13 chr17 64277157 64277537 -30995114 + Cheshire DNA MER1_type 26 525 -1895 4 1075 380 210 8 78 chr17 64277782 64277911 -30994740 + Lx9 LINE L1 7257 7376 -268 4 1075 406 182 247 71 chr17 64278541 64278695 -30993956 + Lx9 LINE L1 7316 7496 -148 4 1075 696 208 209 23 chr17 64279410 64279587 -30993064 - B3 SINE B2 -2 214 5 4 1075 3255 291 78 53 chr17 64279612 64280891 -30991760 - Lx9 LINE L1 -5 7639 5718 4 1075 216 0 0 0 chr17 64280891 64280915 -30991736 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1075 3255 240 81 64 chr17 64280915 64282340 -30990311 - Lx9 LINE L1 -130 5717 4280 4 1075 250 340 140 0 chr17 64282754 64282854 -30989797 + MIRb SINE MIR 120 233 -35 4 1075 285 287 98 23 chr17 64282953 64283085 -30989566 - MIRb SINE MIR -123 145 4 4 1075 690 158 100 0 chr17 64283167 64283287 -30989364 + B1_Mus2 SINE Alu 3 134 -13 4 1075 355 24 0 0 chr17 64283932 64283974 -30988677 + MTC LTR MaLR 6 47 -374 4 1075 257 291 12 10 chr17 64283952 64284051 -30988600 + ORR1E LTR MaLR 253 397 -10 4 1075 498 17 0 0 chr17 64284466 64284525 -30988126 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1075 519 326 60 27 chr17 64284525 64284708 -30987943 - B4A SINE B4 -23 269 81 4 1075 221 186 0 33 chr17 64284843 64284904 -30987747 + CT-rich Low_complexity Low_complexity 1 59 0 4 1075 1817 287 133 29 chr17 64284904 64285801 -30986850 - Lx8 LINE L1 -145 7328 6339 4 1075 284 243 65 39 chr17 64285812 64285889 -30986762 - B4A SINE B4 -211 81 3 4 1075 839 148 7 0 chr17 64285893 64286042 -30986609 + CT-rich Low_complexity Low_complexity 1 150 0 4 1075 341 304 46 59 chr17 64286046 64286295 -30986356 - B4 SINE B4 -46 246 7 4 1075 180 0 0 0 chr17 64286864 64286884 -30985767 + (CCCCCT)n Simple_repeat Simple_repeat 2 21 0 4 1075 427 162 20 0 chr17 64287858 64287957 -30984694 + (TCTA)n Simple_repeat Simple_repeat 3 103 0 4 1075 645 204 130 26 chr17 64288517 64288748 -30983903 - Lx7 LINE L1 -372 7324 7070 4 1075 22 35 0 0 chr17 64288960 64288989 -30983662 + AT_rich Low_complexity Low_complexity 1 29 0 5 1075 327 231 0 0 chr17 64290465 64290573 -30982078 + (CA)n Simple_repeat Simple_repeat 2 109 0 5 1075 350 159 14 0 chr17 64291337 64291406 -30981245 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 5 1075 217 170 67 11 chr17 64291723 64291812 -30980839 + (TATAA)n Simple_repeat Simple_repeat 5 98 0 5 1075 302 115 0 19 chr17 64292051 64292104 -30980547 + (CCCCCT)n Simple_repeat Simple_repeat 1 52 0 5 1075 1083 75 0 0 chr17 64292104 64292250 -30980401 + (TTTC)n Simple_repeat Simple_repeat 3 148 0 5 1075 22 0 0 0 chr17 64292820 64292842 -30979809 + AT_rich Low_complexity Low_complexity 1 22 0 5 1075 211 157 39 0 chr17 64293471 64293522 -30979129 + (TCTG)n Simple_repeat Simple_repeat 4 56 0 5 1075 874 207 71 149 chr17 64295140 64295549 -30977102 + MTE2a LTR MaLR 1 377 -2 5 1075 573 281 15 15 chr17 64295748 64295885 -30976766 - ORR1E LTR MaLR -222 137 1 5 1075 295 323 29 48 chr17 64296254 64296358 -30976293 + PB1D10 SINE Alu 1 102 -15 5 1075 448 318 65 43 chr17 64296720 64297042 -30975609 + MTD LTR MaLR 1 329 -90 5 1075 180 0 0 0 chr17 64297486 64297506 -30975145 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 1075 199 277 8 89 chr17 64298515 64298638 -30974013 - L4 LINE RTE -7 2022 1910 5 1075 21 0 0 0 chr17 64300001 64300022 -30972629 + AT_rich Low_complexity Low_complexity 1 21 0 5 1075 464 294 58 42 chr17 64301677 64301918 -30970733 - Lx8 LINE L1 -180 7293 7049 5 1075 1937 309 96 21 chr17 64301933 64303364 -30969287 - Lx8 LINE L1 -489 6984 5431 5 1075 866 99 8 0 chr17 64303364 64303495 -30969156 + (TCTCC)n Simple_repeat Simple_repeat 1 132 0 5 1075 319 294 136 25 chr17 64303495 64303549 -30969102 - Lx8 LINE L1 -425 5458 5388 5 1075 21 0 0 0 chr17 64304006 64304027 -30968624 + AT_rich Low_complexity Low_complexity 1 21 0 5 1075 185 294 0 0 chr17 64304600 64304651 -30968000 + L2a LINE L2 3376 3426 0 5 1075 266 314 58 7 chr17 64305015 64305169 -30967482 + MIR SINE MIR 84 245 -17 5 1075 273 355 65 9 chr17 64305354 64305462 -30967189 - B1F1 SINE Alu -34 115 2 5 1075 342 0 0 0 chr17 64305729 64305767 -30966884 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1075 25 0 0 0 chr17 64307146 64307171 -30965480 + AT_rich Low_complexity Low_complexity 1 25 0 5 1075 3535 114 54 11 chr17 64307286 64307837 -30964814 - Lx LINE L1 -1 6653 6079 5 1075 1326 99 19 9 chr17 64307840 64308054 -30964597 + Lx LINE L1 5868 6083 -571 5 1075 605 153 0 8 chr17 64309594 64309719 -30962932 + CT-rich Low_complexity Low_complexity 2 125 0 5 1075 1289 173 136 69 chr17 64309728 64310088 -30962563 - ORR1C2 LTR MaLR 0 384 1 5 1075 1161 266 48 30 chr17 64310117 64310617 -30962034 - L1_Mur3 LINE L1 -1083 4797 4289 5 1075 528 59 0 0 chr17 64311825 64311893 -30960758 + (TCCC)n Simple_repeat Simple_repeat 1 68 0 5 1075 396 59 0 0 chr17 64311912 64311963 -30960688 + (CATA)n Simple_repeat Simple_repeat 1 51 0 5 1075 235 220 67 17 chr17 64311968 64312028 -30960623 - ID4_ SINE ID -11 72 10 5 1075 349 297 90 68 chr17 64312599 64312921 -30959730 - MLT1C LTR MaLR -91 376 48 5 1075 257 292 124 0 chr17 64313318 64313431 -30959220 + MER58B DNA MER1_type 17 143 -198 5 1075 314 285 183 45 chr17 64313755 64313979 -30958672 - B4A SINE B4 -33 259 5 5 1075 325 200 83 37 chr17 64313983 64314092 -30958559 - L1M2 LINE L1 -462 5829 5716 5 1075 1131 252 47 47 chr17 64314446 64314982 -30957669 - Lx7 LINE L1 0 7696 7161 5 1075 311 312 18 44 chr17 64315487 64315601 -30957050 - PB1D10 SINE Alu -5 112 2 5 1075 223 275 0 55 chr17 64316117 64316190 -30956461 + CT-rich Low_complexity Low_complexity 5 73 0 5 1075 403 299 4 4 chr17 64316198 64316318 -30956333 - ORR1D2 LTR MaLR -1 373 254 5 1075 304 307 109 80 chr17 64316574 64316850 -30955801 + L1MEg LINE L1 649 932 -5152 5 1075 306 205 0 0 chr17 64316973 64317051 -30955600 + CT-rich Low_complexity Low_complexity 1 78 0 5 1075 222 271 102 0 chr17 64317630 64317689 -30954962 - ID4_ SINE ID 0 83 19 5 1075 441 292 33 0 chr17 64317727 64317847 -30954804 + B3A SINE B2 1 124 -74 5 1075 426 20 0 0 chr17 64318823 64318874 -30953777 + (CAA)n Simple_repeat Simple_repeat 2 52 0 5 1075 462 18 0 0 chr17 64320218 64320273 -30952378 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1075 528 100 0 0 chr17 64320607 64320687 -30951964 + (CA)n Simple_repeat Simple_repeat 1 80 0 5 1075 197 33 0 32 chr17 64322801 64322832 -30949819 + (TA)n Simple_repeat Simple_repeat 1 30 0 5 1075 317 247 178 0 chr17 64322840 64322986 -30949665 - Tigger7 DNA MER2_type -118 2373 2202 5 1075 241 26 0 50 chr17 64323331 64323371 -30949280 + (CACCC)n Simple_repeat Simple_repeat 4 41 0 5 1075 335 347 14 23 chr17 64324258 64324450 -30948201 - L1MD3 LINE L1 -218 5944 5755 5 1075 306 98 0 0 chr17 64324577 64324628 -30948023 + (TC)n Simple_repeat Simple_repeat 1 51 0 5 1075 281 251 12 0 chr17 64324628 64324739 -30947912 - L1MD3 LINE L1 -653 5647 5529 5 1075 189 107 0 0 chr17 64324991 64325019 -30947632 + (TCTG)n Simple_repeat Simple_repeat 1 28 0 5 1075 250 225 14 14 chr17 64325111 64325183 -30947468 - L1MD3 LINE L1 -740 5440 5369 5 1075 370 260 147 16 chr17 64325340 64325469 -30947182 - RLTR21 LTR ERVK -350 1222 1077 5 1075 5781 128 28 26 chr17 64325452 64325500 -30947151 - RMER12B LTR ERVK -151 1253 1202 5 1075 622 54 43 0 chr17 64325500 64325593 -30947058 + (CATA)n Simple_repeat Simple_repeat 2 98 0 5 1075 5781 128 28 26 chr17 64325593 64326555 -30946096 - RMER12B LTR ERVK -203 1201 241 5 1075 377 243 0 0 chr17 64326522 64326596 -30946055 - RMER12B LTR ERVK -1330 74 1 5 1075 237 250 125 0 chr17 64326773 64326845 -30945806 - ID4_ SINE ID 0 83 3 5 1075 325 253 172 46 chr17 64326852 64327026 -30945625 - L1MD3 LINE L1 -840 5303 5108 5 1075 360 0 0 0 chr17 64328073 64328113 -30944538 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1075 363 275 23 70 chr17 64331588 64331760 -30940891 - RSINE1 SINE B4 0 165 2 5 1075 26769 62 0 0 chr17 64332066 64335678 -30936973 + L1Md_F2 LINE L1 1975 5586 -297 5 1075 7890 57 4 1 chr17 64335678 64336666 -30935985 + L1Md_F2 LINE L1 5587 6577 -5 5 1075 183 80 0 0 chr17 64336670 64336695 -30935956 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1075 240 111 0 0 chr17 64336848 64336884 -30935767 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 5 1075 347 335 49 11 chr17 64337057 64337406 -30935245 + L1MA6 LINE L1 5531 5892 -399 5 1075 391 254 103 10 chr17 64337507 64337702 -30934949 + L1MA6 LINE L1 6062 6274 -26 5 1075 267 196 0 19 chr17 64338133 64338185 -30934466 + PB1D10 SINE Alu 67 117 0 5 1075 283 302 66 16 chr17 64338832 64338953 -30933698 - L2a LINE L2 -36 3390 3264 5 1075 406 316 0 89 chr17 64338970 64339076 -30933575 + B3A SINE B2 43 136 -62 5 1075 378 0 0 0 chr17 64339076 64339118 -30933533 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 5 1075 406 316 0 89 chr17 64339118 64339157 -30933494 + B3A SINE B2 137 175 -23 5 1075 257 349 193 14 chr17 64339432 64339650 -30933001 - L2a LINE L2 -413 3006 2750 5 1075 228 357 0 0 chr17 64343551 64343621 -30929030 - ID4 SINE ID -11 72 3 5 1075 241 208 57 0 chr17 64344940 64344993 -30927658 - PB1D10 SINE Alu 0 117 62 5 1075 416 230 9 48 chr17 64344949 64345054 -30927597 - ID_B1 SINE B4 -9 215 115 5 1075 396 40 0 0 chr17 64345291 64345341 -30927310 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1075 234 0 0 0 chr17 64345772 64345798 -30926853 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 1075 444 67 0 0 chr17 64346077 64346137 -30926514 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 1075 655 235 15 0 chr17 64346214 64346346 -30926305 - RSINE1 SINE B4 -29 136 3 5 1075 399 269 197 24 chr17 64346498 64346711 -30925940 + B4A SINE B4 2 251 -41 5 1075 828 246 43 19 chr17 64349062 64349273 -30923378 + B3 SINE B2 1 216 0 5 1075 306 154 0 0 chr17 64349273 64349351 -30923300 + (TA)n Simple_repeat Simple_repeat 1 78 0 5 1075 444 326 59 43 chr17 64349851 64350037 -30922614 - RMER30 DNA MER1_type -6 196 8 5 1075 3267 21 39 0 chr17 64350171 64350552 -30922099 + MTA_Mm LTR MaLR 1 396 0 5 1075 303 308 0 42 chr17 64351682 64351777 -30920874 + MLT1D LTR MaLR 402 492 -13 5 1075 202 290 82 41 chr17 64352084 64352181 -30920470 + MER5A DNA MER1_type 75 175 -14 5 1075 423 0 0 0 chr17 64353702 64353749 -30918902 + (TC)n Simple_repeat Simple_repeat 1 47 0 5 1075 420 20 0 0 chr17 64353749 64353797 -30918854 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1075 190 0 67 0 chr17 64353914 64353944 -30918707 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 1075 1155 116 10 16 chr17 64354527 64354719 -30917932 + B2_Mm1a SINE B2 3 193 0 5 1075 832 113 14 14 chr17 64354737 64354881 -30917770 + (GAAA)n Simple_repeat Simple_repeat 2 145 0 5 1075 315 220 16 0 chr17 64355117 64355189 -30917462 - PB1 SINE Alu 0 120 56 5 1075 794 185 20 0 chr17 64355876 64356022 -30916629 + B1_Mur1 SINE Alu 1 149 0 5 1076 239 270 0 13 chr17 64356659 64356734 -30915917 + (TA)n Simple_repeat Simple_repeat 2 75 0 5 1076 762 289 31 39 chr17 64356917 64357277 -30915374 - L1MA5 LINE L1 -296 6004 5648 5 1076 289 250 21 125 chr17 64357907 64357919 -30914732 + MT2B LTR ERVL 156 157 -444 5 1076 470 257 0 58 chr17 64357919 64358039 -30914612 + PB1D10 SINE Alu 1 113 -4 5 1076 251 286 0 16 chr17 64358061 64358125 -30914526 + ID4_ SINE ID 18 80 -3 5 1076 560 255 98 39 chr17 64358161 64358365 -30914286 + B3 SINE B2 1 216 0 5 1076 203 89 71 0 chr17 64358571 64358627 -30914024 + (TA)n Simple_repeat Simple_repeat 1 60 0 5 1076 706 269 28 17 chr17 64358643 64358821 -30913830 + B3 SINE B2 3 182 -34 5 1076 298 302 23 11 chr17 64359122 64359209 -30913442 - Charlie5 DNA MER1_type -2535 89 2 5 1076 1897 153 74 16 chr17 64359807 64360172 -30912479 - ORR1B1 LTR MaLR -8 386 1 5 1076 441 0 0 0 chr17 64361525 64361574 -30911077 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1076 370 210 57 25 chr17 64362626 64362748 -30909903 - L1M5 LINE L1 -702 5477 5352 5 1076 300 158 0 0 chr17 64363084 64363141 -30909510 + (CA)n Simple_repeat Simple_repeat 1 57 0 5 1076 278 227 0 0 chr17 64363149 64363215 -30909436 - Lx9 LINE L1 -178 7466 7401 5 1076 719 253 73 23 chr17 64363232 64363491 -30909160 + Lx9 LINE L1 7080 7351 -293 5 1076 271 242 203 31 chr17 64366231 64366359 -30906292 + B4 SINE B4 125 274 -18 6 1076 525 83 0 0 chr17 64366783 64366867 -30905784 + (TC)n Simple_repeat Simple_repeat 1 84 0 6 1076 261 0 0 0 chr17 64366867 64366896 -30905755 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1076 735 186 20 52 chr17 64366919 64367072 -30905579 - B1_Mur3 SINE Alu -1 148 1 6 1076 212 288 24 59 chr17 64367485 64367570 -30905081 + BC1_Mm scRNA scRNA 1 82 -70 6 1076 244 310 96 17 chr17 64368403 64368518 -30904133 - MIRb SINE MIR -103 165 42 6 1076 202 211 0 0 chr17 64371008 64371046 -30901605 + (CATA)n Simple_repeat Simple_repeat 2 39 0 6 1076 417 293 112 27 chr17 64371159 64371489 -30901162 - L1MDb LINE L1 -5330 1079 722 6 1076 1669 179 43 12 chr17 64371553 64371875 -30900776 + MTC LTR MaLR 90 421 0 6 1076 330 350 5 91 chr17 64372069 64372267 -30900384 - L1MDb LINE L1 -6063 346 166 6 1076 383 239 0 0 chr17 64372392 64372463 -30900188 + PB1D9 SINE Alu 1 71 -49 6 1076 639 126 10 0 chr17 64372467 64372570 -30900081 + ORR1C2 LTR MaLR 277 380 -4 6 1076 36 62 0 0 chr17 64372592 64372656 -30899995 + AT_rich Low_complexity Low_complexity 1 64 0 6 1076 24 73 0 35 chr17 64372702 64372787 -30899864 + AT_rich Low_complexity Low_complexity 1 82 0 6 1076 396 0 0 0 chr17 64373942 64373986 -30898665 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1076 208 222 59 73 chr17 64374319 64374387 -30898264 + L3 LINE CR1 4157 4223 -266 6 1076 314 232 96 96 chr17 64375321 64375478 -30897173 + MIRc SINE MIR 63 219 -49 6 1076 619 226 137 11 chr17 64375953 64376128 -30896523 - B3A SINE B2 0 198 2 6 1076 481 48 0 0 chr17 64377252 64377314 -30895337 - B1_Mm SINE Alu -1 146 85 6 1076 21 57 0 0 chr17 64377315 64377350 -30895301 + AT_rich Low_complexity Low_complexity 1 35 0 6 1076 356 304 54 68 chr17 64377604 64377809 -30894842 - L1M5 LINE L1 -3012 3134 2933 6 1076 336 24 0 0 chr17 64378199 64378240 -30894411 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1076 416 294 119 0 chr17 64379137 64379280 -30893371 + RSINE1 SINE B4 4 163 -2 6 1076 3782 62 2 22 chr17 64380188 64380682 -30891969 - L1_Mus1 LINE L1 0 6567 6084 6 1076 6244 65 2 0 chr17 64380682 64381740 -30890911 + L1_Mus1 LINE L1 5018 6078 -488 6 1076 505 254 58 7 chr17 64381781 64381920 -30890731 - B1_Mur2 SINE Alu -1 148 3 6 1076 288 77 0 0 chr17 64382352 64382391 -30890260 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1076 369 314 58 14 chr17 64383188 64383395 -30889256 - L2 LINE L2 -1136 2283 2068 6 1076 232 336 138 64 chr17 64383694 64383977 -30888674 - L2 LINE L2 -1840 1579 1276 6 1076 26 0 0 0 chr17 64388032 64388058 -30884593 + AT_rich Low_complexity Low_complexity 1 26 0 6 1076 621 306 136 11 chr17 64389044 64389411 -30883240 - Charlie1a DNA MER1_type -493 962 550 6 1076 399 41 0 0 chr17 64389925 64389974 -30882677 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1076 519 287 78 65 chr17 64390105 64390506 -30882145 - L1MB7 LINE L1 -333 5851 5422 6 1076 389 244 33 42 chr17 64390506 64390626 -30882025 - PB1D9 SINE Alu -1 119 1 6 1076 519 287 78 65 chr17 64390626 64390779 -30881872 - L1MB7 LINE L1 -763 5421 5290 6 1076 327 206 154 12 chr17 64390843 64391005 -30881646 - L1MD LINE L1 -966 5180 4996 6 1076 671 270 99 35 chr17 64391082 64391427 -30881224 + L1M3 LINE L1 4815 5181 -959 6 1076 444 135 0 0 chr17 64391437 64391511 -30881140 + (GA)n Simple_repeat Simple_repeat 2 75 0 6 1076 389 295 161 13 chr17 64391596 64391912 -30880739 + L1M3 LINE L1 5269 5631 -669 6 1076 922 104 7 53 chr17 64393916 64394068 -30878583 - B1_Mur4 SINE Alu 0 150 6 6 1076 415 338 0 21 chr17 64394088 64394230 -30878421 - B1_Mus2 SINE Alu -8 139 1 6 1076 21 36 0 0 chr17 64394305 64394333 -30878318 + AT_rich Low_complexity Low_complexity 1 28 0 6 1076 344 162 25 0 chr17 64395435 64395515 -30877136 + (TATG)n Simple_repeat Simple_repeat 4 85 0 6 1076 22 0 0 0 chr17 64395651 64395673 -30876978 + AT_rich Low_complexity Low_complexity 1 22 0 6 1076 527 151 33 1 chr17 64397341 64397450 -30875201 + PB1D9 SINE Alu 9 120 0 6 1076 2029 115 55 9 chr17 64397513 64397559 -30875092 - MTB LTR MaLR -59 341 297 6 1076 3442 46 5 0 chr17 64397559 64397952 -30874699 + MTA_Mm LTR MaLR 1 395 -1 6 1076 2029 115 55 9 chr17 64397952 64398231 -30874420 - MTB LTR MaLR -104 296 1 6 1076 276 30 0 0 chr17 64399477 64399510 -30873141 + (CAG)n Simple_repeat Simple_repeat 2 34 0 6 1076 1121 217 47 63 chr17 64399856 64400192 -30872459 - ORR1D1 LTR MaLR -12 367 3 6 1076 1690 187 66 8 chr17 64400194 64400560 -30872091 - ORR1D1-int LTR MaLR 0 1370 984 6 1076 22 35 0 0 chr17 64400767 64400796 -30871855 + AT_rich Low_complexity Low_complexity 1 29 0 6 1076 1819 182 108 8 chr17 64401493 64401876 -30870775 + MTC LTR MaLR 1 407 -14 6 1076 542 298 45 39 chr17 64402067 64402245 -30870406 - RMER30 DNA MER1_type -3 199 21 6 1076 255 105 0 0 chr17 64403513 64403551 -30869100 - tRNA-Gly-GGA tRNA tRNA -37 38 1 6 1076 273 299 91 66 chr17 64403874 64404071 -30868580 - MER2 DNA MER2_type -140 205 4 6 1076 402 254 147 16 chr17 64404239 64404566 -30868085 - L1MC4a LINE L1 -189 7806 7296 6 1076 545 208 116 8 chr17 64404653 64404774 -30867877 + B3 SINE B2 79 212 -4 6 1076 445 169 149 0 chr17 64405367 64405521 -30867130 - Lx9 LINE L1 -2 7642 7466 6 1076 3085 219 107 8 chr17 64405531 64406273 -30866378 - Lx9 LINE L1 -304 7340 6526 6 1076 2437 191 61 16 chr17 64406300 64406648 -30866003 - L1_Rod LINE L1 -3755 2092 1728 6 1076 702 35 0 0 chr17 64406648 64406733 -30865918 + (TG)n Simple_repeat Simple_repeat 2 86 0 6 1076 2437 225 160 11 chr17 64406733 64407725 -30864926 - L1_Rod LINE L1 -4120 1727 589 6 1076 320 279 145 31 chr17 64407814 64407973 -30864678 - L1_Rod LINE L1 -6933 675 499 6 1076 260 328 56 49 chr17 64408014 64408163 -30864488 - MIRb SINE MIR -117 159 10 6 1076 913 235 46 36 chr17 64408748 64409053 -30863598 - RLTR15 LTR ERVK -16 343 36 6 1076 22 35 0 0 chr17 64409378 64409407 -30863244 + AT_rich Low_complexity Low_complexity 1 29 0 6 1076 180 0 0 0 chr17 64409673 64409693 -30862958 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 1076 429 20 0 0 chr17 64409693 64409742 -30862909 + (GA)n Simple_repeat Simple_repeat 1 50 0 6 1076 233 200 39 135 chr17 64410690 64410750 -30861901 - CYRA11_Mm Unknown Y-chromosome -359 258 178 6 1076 246 139 0 0 chr17 64410750 64410786 -30861865 + URR1B DNA MER1_type 189 224 -1 6 1076 306 0 0 0 chr17 64410890 64410924 -30861727 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1076 603 27 0 0 chr17 64410924 64410996 -30861655 + (GA)n Simple_repeat Simple_repeat 1 73 0 6 1076 374 285 169 27 chr17 64411080 64411228 -30861423 - B4A SINE B4 -97 195 27 6 1076 4560 37 12 2 chr17 64411243 64411757 -30860894 - L1Md_F3 LINE L1 0 6584 6066 6 1076 4459 36 0 0 chr17 64411757 64412471 -30860180 + L1Md_F3 LINE L1 5356 6069 -515 6 1076 536 333 7 7 chr17 64414266 64414417 -30858234 + RSINE1 SINE B4 4 154 -11 6 1076 320 355 73 16 chr17 64415341 64415464 -30857187 + MLT-int LTR MaLR 1113 1242 -493 6 1076 401 324 39 34 chr17 64415500 64415679 -30856972 + MLT1A1 LTR MaLR 224 403 -5 6 1076 411 284 142 36 chr17 64415938 64416476 -30856175 + L1MA5 LINE L1 5320 5929 -251 6 1076 271 247 65 0 chr17 64416591 64416684 -30855967 + L1MA5 LINE L1 6081 6179 -1 6 1076 23 54 0 0 chr17 64416829 64416866 -30855785 + AT_rich Low_complexity Low_complexity 1 37 0 6 1076 23 0 0 0 chr17 64417047 64417070 -30855581 + AT_rich Low_complexity Low_complexity 1 23 0 6 1076 457 308 14 71 chr17 64417373 64417513 -30855138 + RSINE1 SINE B4 27 158 -7 6 1076 3563 116 33 13 chr17 64417703 64417732 -30854919 + Lx LINE L1 5332 5360 -523 6 1076 731 45 27 0 chr17 64417732 64417844 -30854807 + L1Md_F3 LINE L1 6470 6584 0 6 1076 6988 95 33 40 chr17 64417844 64419154 -30853497 + Lx LINE L1 5361 6654 0 6 1076 233 262 71 48 chr17 64419661 64419745 -30852906 + MER58A DNA MER1_type 26 111 -113 6 1076 5938 94 9 10 chr17 64419795 64420582 -30852069 - Lx LINE L1 -1 6653 5868 6 1076 14554 148 42 20 chr17 64420582 64423152 -30849499 - L1_Mm LINE L1 -310 5573 2947 6 1076 1038 225 72 23 chr17 64423480 64423744 -30848907 + B4A SINE B4 9 285 -7 6 1076 2930 74 36 33 chr17 64425777 64426197 -30846454 - BGLII LTR ERVK 0 421 1 6 1076 203 184 0 0 chr17 64426538 64426576 -30846075 + (TTA)n Simple_repeat Simple_repeat 1 38 0 6 1076 306 263 40 0 chr17 64427107 64427206 -30845445 + Charlie5 DNA MER1_type 2243 2345 -279 6 1076 1481 94 16 5 chr17 64427220 64427412 -30845239 + B2_Mm2 SINE B2 2 195 0 6 1076 24 32 0 0 chr17 64427436 64427467 -30845184 + AT_rich Low_complexity Low_complexity 1 31 0 6 1076 230 156 0 0 chr17 64428655 64428700 -30843951 + CT-rich Low_complexity Low_complexity 16 60 0 6 1076 767 211 35 0 chr17 64428700 64428842 -30843809 - B1_Mur2 SINE Alu -2 147 1 6 1076 314 208 314 77 chr17 64428975 64429131 -30843520 - B2_Mm2 SINE B2 -2 193 1 6 1076 1196 66 0 0 chr17 64429714 64429850 -30842801 + B1_Mus2 SINE Alu 2 137 -10 6 1076 204 40 0 0 chr17 64429850 64429875 -30842776 + (GAAAA)n Simple_repeat Simple_repeat 2 26 0 6 1076 220 242 61 0 chr17 64430037 64430103 -30842548 - ID4 SINE ID -13 70 1 6 1076 1255 62 7 0 chr17 64430658 64430803 -30841848 - B1_Mus2 SINE Alu 0 147 2 6 1076 24 0 0 0 chr17 64431273 64431297 -30841354 + AT_rich Low_complexity Low_complexity 1 24 0 6 1076 1352 227 110 52 chr17 64431434 64431987 -30840664 + RCHARR1 DNA MER1_type 324 908 -66 6 1076 23 0 0 0 chr17 64431987 64432010 -30840641 + AT_rich Low_complexity Low_complexity 1 23 0 6 1076 3374 51 5 5 chr17 64433146 64433542 -30839109 - MTA_Mm LTR MaLR 0 396 1 6 1076 249 33 0 0 chr17 64433917 64433947 -30838704 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1076 228 122 0 0 chr17 64434487 64434528 -30838123 + (TTG)n Simple_repeat Simple_repeat 2 42 0 6 1076 370 272 15 151 chr17 64434921 64435120 -30837531 + B3A SINE B2 1 172 -44 6 1076 204 40 0 0 chr17 64435121 64435146 -30837505 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1076 22 0 0 0 chr17 64435175 64435197 -30837454 + AT_rich Low_complexity Low_complexity 1 22 0 6 1076 207 0 0 0 chr17 64436855 64436878 -30835773 + (A)n Simple_repeat Simple_repeat 1 23 0 6 1076 1146 82 0 0 chr17 64437602 64437748 -30834903 + B1_Mus1 SINE Alu 2 147 -1 7 1076 186 189 0 0 chr17 64437887 64437924 -30834727 + (CATA)n Simple_repeat Simple_repeat 2 38 0 7 1076 3672 25 2 0 chr17 64437924 64438319 -30834332 + MTA_Mm LTR MaLR 1 396 0 7 1076 399 41 0 0 chr17 64438319 64438368 -30834283 + (CATA)n Simple_repeat Simple_repeat 4 52 0 7 1076 3665 117 104 108 chr17 64438553 64439312 -30833339 - RMER6A LTR ERVK 0 756 1 7 1076 1045 242 5 5 chr17 64439372 64439580 -30833071 + B3 SINE B2 3 210 -6 7 1076 87 76 0 0 chr17 64439736 64439921 -30832730 + AT_rich Low_complexity Low_complexity 1 185 0 7 1076 383 321 85 25 chr17 64440058 64440259 -30832392 - MER58A DNA MER1_type -11 213 1 7 1076 372 340 0 0 chr17 64440555 64440655 -30831996 + PB1D10 SINE Alu 8 107 -10 7 1076 1964 176 40 8 chr17 64440770 64441142 -30831509 - ORR1C2 LTR MaLR 0 384 1 7 1076 237 274 24 12 chr17 64441245 64441330 -30831321 - Charlie5 DNA MER1_type -20 2604 2519 7 1076 207 337 78 44 chr17 64441609 64441789 -30830862 - L3b LINE CR1 -116 366 181 7 1076 21 0 0 0 chr17 64441844 64441865 -30830786 + AT_rich Low_complexity Low_complexity 1 21 0 7 1076 649 207 90 51 chr17 64443496 64443674 -30828977 - B2_Mm2 SINE B2 -8 187 3 7 1076 888 127 0 0 chr17 64444701 64444866 -30827785 + (TG)n Simple_repeat Simple_repeat 2 166 0 7 1076 732 146 49 35 chr17 64445326 64445339 -30827312 - B1_Mur4 SINE Alu 0 150 142 7 1076 423 0 0 0 chr17 64445339 64445386 -30827265 + (GTTTG)n Simple_repeat Simple_repeat 2 48 0 7 1076 732 146 49 35 chr17 64445386 64445514 -30827137 - B1_Mur4 SINE Alu -9 141 7 7 1076 226 200 20 0 chr17 64446026 64446076 -30826575 + L1MA9 LINE L1 6174 6224 -88 7 1076 402 21 0 0 chr17 64446942 64446989 -30825662 + (GA)n Simple_repeat Simple_repeat 2 48 0 7 1076 352 307 53 0 chr17 64448817 64448967 -30823684 - ID_B1 SINE B4 -1 223 66 7 1076 21 0 0 0 chr17 64449418 64449439 -30823212 + AT_rich Low_complexity Low_complexity 1 21 0 7 1076 243 164 68 0 chr17 64450131 64450204 -30822447 + (GTTTG)n Simple_repeat Simple_repeat 2 79 0 7 1076 229 196 0 0 chr17 64450172 64450228 -30822423 + T-rich Low_complexity Low_complexity 1 56 0 7 1076 576 110 70 0 chr17 64450230 64450330 -30822321 - B1_Mur4 SINE Alu -3 147 41 7 1076 262 186 16 33 chr17 64450360 64450421 -30822230 - B1_Mur4 SINE Alu -90 60 1 7 1076 34456 79 7 21 chr17 64450450 64456710 -30815941 - L1_Mus1 LINE L1 0 6567 409 7 1076 411 324 79 37 chr17 64458887 64459076 -30813575 - B3A SINE B2 0 198 2 7 1076 886 25 0 8 chr17 64459924 64460043 -30812608 - L1Md_A LINE L1 -1 6581 6464 7 1076 230 311 45 39 chr17 64461244 64461398 -30811253 + L1M5 LINE L1 5639 5793 -331 7 1076 279 275 43 14 chr17 64461464 64461534 -30811117 + ID4_ SINE ID 12 83 0 7 1076 264 252 73 124 chr17 64461727 64461904 -30810747 + B4 SINE B4 1 168 -124 7 1076 234 0 0 0 chr17 64461992 64462018 -30810633 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 1076 549 0 0 0 chr17 64462018 64462078 -30810573 + (GA)n Simple_repeat Simple_repeat 2 62 0 7 1076 439 16 0 0 chr17 64462162 64462224 -30810427 + L1_Mus3 LINE L1 6576 6637 -1 7 1076 2843 213 36 2 chr17 64462225 64462828 -30809823 - Lx7 LINE L1 -356 7340 6717 7 1076 646 244 16 0 chr17 64463712 64463839 -30808812 + B1_Mur3 SINE Alu 1 129 -20 7 1076 180 125 0 0 chr17 64463841 64463873 -30808778 + (TAAAAA)n Simple_repeat Simple_repeat 3 34 0 7 1076 241 346 37 46 chr17 64464419 64464528 -30808123 + RSINE1 SINE B4 58 165 0 7 1076 744 171 149 102 chr17 64464849 64465064 -30807587 + URR1B DNA MER1_type 1 225 0 7 1076 489 275 133 45 chr17 64467063 64467334 -30805317 - Lx7 LINE L1 -1789 5907 5580 7 1076 484 283 21 0 chr17 64467839 64467984 -30804667 - B1F SINE Alu -1 148 1 7 1076 2625 68 3 3 chr17 64468372 64468699 -30803952 + ORR1A2 LTR MaLR 1 327 0 7 1076 581 282 58 47 chr17 64470717 64471010 -30801641 - MLT1A0 LTR MaLR -16 374 48 7 1076 477 34 0 0 chr17 64472727 64472786 -30799865 + (TC)n Simple_repeat Simple_repeat 2 60 0 7 1076 222 37 0 0 chr17 64473586 64473613 -30799038 + (CA)n Simple_repeat Simple_repeat 1 27 0 7 1076 2241 208 10 18 chr17 64474612 64475102 -30797549 - L1_Mur3 LINE L1 -3946 1934 1449 7 1076 651 290 39 51 chr17 64475151 64475540 -30797111 - L1_Mur3 LINE L1 -6477 1251 868 7 1076 192 77 0 0 chr17 64475868 64475894 -30796757 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 7 1076 1888 226 27 5 chr17 64475965 64476129 -30796522 - Lx5 LINE L1 -144 6906 6735 7 1076 225 0 0 0 chr17 64476129 64476154 -30796497 + (TA)n Simple_repeat Simple_repeat 2 26 0 7 1076 1888 226 27 5 chr17 64476154 64476358 -30796293 - Lx5 LINE L1 -316 6734 6530 7 1076 1088 83 14 0 chr17 64476907 64477052 -30795599 + B1_Mus1 SINE Alu 2 148 0 7 1076 652 156 180 6 chr17 64477141 64477302 -30795349 + MYSERV16_I-int LTR ERVK 2138 2326 0 7 1076 2165 149 87 32 chr17 64477318 64477790 -30794861 + RLTR11A LTR ERVK 31 528 0 7 1076 458 268 72 13 chr17 64477790 64477942 -30794709 - Lx8 LINE L1 -594 7050 6812 7 1076 229 217 49 16 chr17 64477941 64478002 -30794649 - Lx7 LINE L1 -977 6719 6657 7 1076 401 267 28 19 chr17 64480298 64480405 -30792246 + PB1D10 SINE Alu 3 110 -7 7 1076 258 293 60 0 chr17 64482300 64482416 -30790235 - MER3 DNA MER1_type -13 196 74 7 1076 765 224 197 19 chr17 64484567 64484831 -30787820 - ORR1E LTR MaLR -47 312 2 7 1076 381 185 444 0 chr17 64485000 64485210 -30787441 + Lx9 LINE L1 7340 7640 -4 7 1076 365 274 26 34 chr17 64485971 64486069 -30786582 + PB1D10 SINE Alu 2 98 -19 7 1076 297 0 0 0 chr17 64486069 64486102 -30786549 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1076 365 274 26 34 chr17 64486102 64486120 -30786531 + PB1D10 SINE Alu 99 117 0 7 1076 369 187 0 0 chr17 64486658 64486733 -30785918 + (TA)n Simple_repeat Simple_repeat 1 75 0 7 134 322 310 33 82 chr17 64487360 64487543 -30785108 + Charlie12 DNA MER1_type 1 174 -2699 7 1077 281 256 24 24 chr17 64487474 64487558 -30785093 - RMER30 DNA MER1_type -99 103 20 7 1077 813 136 77 7 chr17 64496180 64496335 -30776316 + ORR1A4 LTR MaLR 7 172 -157 7 1077 3517 150 67 12 chr17 64496336 64497005 -30775646 - ORR1A4-int LTR MaLR -1257 706 1 7 1077 1205 123 30 0 chr17 64497005 64497208 -30775443 - ORR1A4 LTR MaLR -8 321 113 7 1077 392 206 24 89 chr17 64497205 64497389 -30775262 + MT2B LTR ERVL 116 273 -328 7 1077 6207 141 61 5 chr17 64497264 64498444 -30774207 + ORR1A4-int LTR MaLR 718 1963 0 7 1077 1573 145 39 138 chr17 64498445 64498806 -30773845 + ORR1A4 LTR MaLR 5 329 0 7 1077 1344 163 175 52 chr17 64499147 64499490 -30773161 - MTC LTR MaLR 0 421 37 7 1077 1613 154 96 27 chr17 64499556 64499890 -30772761 - ORR1B2 LTR MaLR -8 359 3 7 1077 3688 100 34 25 chr17 64500343 64500365 -30772286 - RMER2 LTR ERV1 0 567 551 1 1077 3307 18 39 3 chr17 64500365 64500747 -30771904 - MTA_Mm LTR MaLR 0 396 1 2 1077 3688 100 34 25 chr17 64500747 64501286 -30771365 - RMER2 LTR ERV1 -17 550 1 1 1077 183 256 0 0 chr17 64501588 64501627 -30771024 + L3 LINE CR1 4445 4483 -6 3 1077 325 291 95 81 chr17 64501709 64501993 -30770658 - ORR1D2 LTR MaLR -7 363 80 4 1077 1855 127 110 15 chr17 64502402 64502737 -30769914 - ORR1B2 LTR MaLR 0 367 1 5 1077 279 287 62 62 chr17 64503678 64503808 -30768843 + MER20 DNA MER1_type 71 200 -19 6 1077 244 267 59 118 chr17 64503799 64503918 -30768733 + LTR78 LTR ERV1 1142 1253 -51 7 1077 377 303 149 37 chr17 64503932 64504261 -30768390 + L1M4 LINE L1 3148 3503 -2640 8 1077 309 264 154 0 chr17 64504267 64504377 -30768274 + RSINE1 SINE B4 39 165 0 9 1077 320 244 183 0 chr17 64504596 64504711 -30767940 + L1MD2 LINE L1 5743 5878 -481 1 1077 21 57 0 0 chr17 64505067 64505102 -30767549 + AT_rich Low_complexity Low_complexity 1 35 0 1 1077 29434 75 8 3 chr17 64505224 64509163 -30763488 + L1Md_F2 LINE L1 1629 5586 -297 1 1077 7458 67 19 16 chr17 64509163 64510145 -30762506 + L1Md_F2 LINE L1 5587 6571 -11 1 1077 268 175 0 16 chr17 64510152 64510216 -30762435 + MTC-int LTR MaLR 1196 1258 0 1 1077 2249 159 42 12 chr17 64510219 64510621 -30762030 + MTC LTR MaLR 8 421 0 1 1077 1547 218 53 22 chr17 64510621 64510976 -30761675 + MMAR1 DNA Mariner 860 1225 -61 1 1077 333 370 101 20 chr17 64511048 64511296 -30761355 + L1M4 LINE L1 3889 4156 -1990 8 1077 3126 31 2 112 chr17 64511574 64512012 -30760639 - RLTR10 LTR ERVK 0 390 1 1 1077 16565 29 4 32 chr17 64512014 64514014 -30758637 - RLTR10-int LTR ERVK -3 1984 41 1 1077 2994 28 2 140 chr17 64514026 64514476 -30758175 - RLTR10 LTR ERVK -2 388 1 1 1077 236 323 0 0 chr17 64514549 64514648 -30758003 + L1_Mur3 LINE L1 3833 3931 -1949 1 1077 236 222 77 11 chr17 64514917 64515008 -30757643 + L1M4 LINE L1 4287 4383 -1763 8 1077 944 90 15 0 chr17 64515020 64515153 -30757498 + B1_Mus1 SINE Alu 14 148 0 1 1077 321 286 163 35 chr17 64515157 64515224 -30757427 + L1MD LINE L1 4397 4468 -1678 1 1077 198 0 0 0 chr17 64515224 64515246 -30757405 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 1077 321 286 163 35 chr17 64515246 64515381 -30757270 + L1MD LINE L1 4469 4625 -1521 1 1077 375 282 106 8 chr17 64515392 64515524 -30757127 + L1MD LINE L1 5264 5408 -766 1 1077 2729 286 111 32 chr17 64515524 64517485 -30755166 + L1M2 LINE L1 3656 5771 -529 2 1077 357 275 47 59 chr17 64517521 64517691 -30754960 + L1_Mur3 LINE L1 4607 4774 -1106 2 1077 228 354 52 0 chr17 64517704 64517800 -30754851 - PB1D10 SINE Alu 0 117 17 2 1077 1953 127 57 29 chr17 64517921 64518270 -30754381 + RLTR15 LTR ERVK 1 359 0 2 1077 296 215 50 108 chr17 64520417 64520456 -30752195 + MLT1B LTR MaLR 55 89 -301 2 1077 4406 20 0 4 chr17 64520456 64520951 -30751700 - MT2_Mm LTR ERVL 0 493 1 2 1077 296 215 50 108 chr17 64520951 64521031 -30751620 + MLT1B LTR MaLR 90 167 -223 2 1077 295 279 23 23 chr17 64521051 64521139 -30751512 + MLT1B LTR MaLR 246 333 -57 2 1077 394 285 199 34 chr17 64521256 64521492 -30751159 + B4A SINE B4 5 279 -13 2 1077 323 227 65 54 chr17 64521541 64521634 -30751017 + HAL1-3A_ME LINE L1 1976 2069 -789 2 1077 483 340 115 0 chr17 64522212 64522465 -30750186 - MER119 DNA MER1_type -169 414 133 2 1077 255 330 61 18 chr17 64522708 64522822 -30749829 - MLT1E1A LTR MaLR 0 680 562 2 1077 204 217 0 0 chr17 64523049 64523095 -30749556 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 1077 414 69 0 0 chr17 64523095 64523153 -30749498 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 1077 414 0 0 0 chr17 64523730 64523776 -30748875 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1077 915 276 62 1 chr17 64524475 64524734 -30747917 + B4A SINE B4 10 292 0 3 1077 237 236 0 0 chr17 64524734 64524840 -30747811 + (CA)n Simple_repeat Simple_repeat 1 106 0 3 1077 7394 166 52 12 chr17 64526769 64529011 -30743640 + Lx5 LINE L1 4683 7043 -7 3 1077 392 319 0 0 chr17 64529612 64529753 -30742898 + (TG)n Simple_repeat Simple_repeat 2 142 0 3 1077 197 260 0 33 chr17 64529754 64529937 -30742714 + (TATG)n Simple_repeat Simple_repeat 4 180 0 3 1077 342 246 152 76 chr17 64530039 64530197 -30742454 - MLT2B1 LTR ERVL -56 511 342 3 1077 252 0 0 0 chr17 64531191 64531219 -30741432 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 1077 816 179 0 26 chr17 64531309 64531581 -30741070 + (CATATA)n Simple_repeat Simple_repeat 1 264 0 4 1077 376 196 0 36 chr17 64531596 64531707 -30740944 + (CATATA)n Simple_repeat Simple_repeat 6 112 0 4 1077 317 171 41 41 chr17 64531707 64531780 -30740871 + HAL1-3A_ME LINE L1 1975 2047 -811 4 1077 420 261 29 0 chr17 64531911 64532049 -30740602 + (GGGTG)n Simple_repeat Simple_repeat 5 146 0 4 1077 530 278 53 34 chr17 64532288 64532552 -30740099 - L1M5 LINE L1 -2402 3744 3476 4 1077 356 353 92 39 chr17 64532553 64533010 -30739641 + L1MD LINE L1 4577 5057 -1089 4 1077 186 118 0 0 chr17 64533175 64533209 -30739442 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1077 1939 176 49 49 chr17 64533244 64533380 -30739271 - MTC LTR MaLR -10 411 268 4 1077 4963 153 41 37 chr17 64533380 64534334 -30738317 + RMER17B LTR ERVK 1 958 0 4 1077 1939 176 49 49 chr17 64534334 64534608 -30738043 - MTC LTR MaLR -154 267 1 4 1077 429 267 163 0 chr17 64534637 64534772 -30737879 + RSINE1 SINE B4 1 157 -8 4 1077 391 333 84 34 chr17 64534888 64535186 -30737465 + L1ME2 LINE L1 5598 5910 -254 4 1077 243 0 0 0 chr17 64538067 64538094 -30734557 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 5 1077 432 0 0 0 chr17 64538967 64539015 -30733636 + (GA)n Simple_repeat Simple_repeat 2 49 0 5 1077 665 110 8 0 chr17 64539484 64539602 -30733049 + (TCTCCC)n Simple_repeat Simple_repeat 1 119 0 5 1077 1884 93 57 164 chr17 64540398 64540789 -30731862 + ORR1A3 LTR MaLR 1 318 -8 5 1077 808 246 67 33 chr17 64541213 64541423 -30731228 - MER20 DNA MER1_type 0 219 3 5 1077 565 323 57 31 chr17 64541460 64541687 -30730964 + MLT1D LTR MaLR 10 242 -263 5 1077 222 175 47 16 chr17 64542338 64542402 -30730249 + A-rich Low_complexity Low_complexity 5 70 0 5 1077 1528 119 64 23 chr17 64542632 64542898 -30729753 + MTC LTR MaLR 1 277 -144 5 1077 3411 224 83 136 chr17 64542906 64543975 -30728676 - ORR1D1-int LTR MaLR -130 1240 242 5 1077 2564 72 12 0 chr17 64543975 64544296 -30728355 + ORR1A2 LTR MaLR 3 327 0 5 1077 3411 224 83 136 chr17 64544296 64544535 -30728116 - ORR1D1-int LTR MaLR -1129 241 1 5 1077 411 21 0 0 chr17 64544539 64544587 -30728064 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 6 1077 449 209 41 57 chr17 64544587 64544709 -30727942 - ORR1D1 LTR MaLR -15 359 240 5 1077 369 336 320 0 chr17 64544792 64545089 -30727562 + Lx8 LINE L1 6636 7027 -446 6 1077 846 177 0 11 chr17 64546143 64546432 -30726219 + (CA)n Simple_repeat Simple_repeat 1 285 0 6 1077 239 250 188 0 chr17 64546658 64546722 -30725929 - PB1D10 SINE Alu -41 76 1 6 1077 253 330 26 9 chr17 64546981 64547094 -30725557 - ERVL-E-int LTR ERVL -3761 1906 1792 6 1077 541 369 34 17 chr17 64547246 64547599 -30725052 - ERVL-E-int LTR ERVL -4004 1663 1305 6 1077 432 312 132 17 chr17 64547620 64547855 -30724796 - LTR16A1 LTR ERVL -17 439 178 6 1077 188 173 0 161 chr17 64547864 64547926 -30724725 + L3 LINE CR1 4142 4193 -296 6 1077 1200 61 0 0 chr17 64548304 64548451 -30724200 + B1_Mm SINE Alu 1 147 0 6 1077 335 225 132 8 chr17 64548471 64548592 -30724059 + L1M5 LINE L1 3073 3208 -2938 6 1077 888 287 38 38 chr17 64548759 64549128 -30723523 + RMER17C LTR ERVK 7 375 -35 6 1077 599 64 0 0 chr17 64549159 64549237 -30723414 + B1_Mm SINE Alu 18 95 -52 7 1077 251 350 34 54 chr17 64550485 64550633 -30722018 - MIRb SINE MIR -100 168 24 7 1077 180 224 11 126 chr17 64550865 64550952 -30721699 + L3 LINE CR1 2615 2691 -1798 7 1077 180 0 0 0 chr17 64552563 64552583 -30720068 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 1077 198 0 0 0 chr17 64552583 64552604 -30720047 + (GA)n Simple_repeat Simple_repeat 1 22 0 7 1077 504 264 92 66 chr17 64553359 64553455 -30719196 + Lx7 LINE L1 5662 5759 -1937 7 1077 396 0 0 0 chr17 64553455 64553499 -30719152 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 1077 432 0 0 0 chr17 64553499 64553547 -30719104 + (GA)n Simple_repeat Simple_repeat 1 48 0 7 1077 504 264 92 66 chr17 64553547 64553676 -30718975 + Lx7 LINE L1 5760 5893 -1803 7 1077 215 319 0 0 chr17 64554114 64554183 -30718468 + (TA)n Simple_repeat Simple_repeat 2 70 0 7 1077 643 311 21 34 chr17 64554225 64554461 -30718190 - Lx9 LINE L1 -453 7191 6959 7 1077 801 109 0 0 chr17 64554989 64555099 -30717552 + B1_Mus2 SINE Alu 15 124 -23 8 1077 27 96 0 0 chr17 64556632 64556715 -30715936 + AT_rich Low_complexity Low_complexity 1 83 0 8 1077 251 337 167 11 chr17 64557435 64557621 -30715030 + B4A SINE B4 62 276 -16 8 1077 329 345 62 27 chr17 64557670 64557926 -30714725 - L1ME1 LINE L1 -188 5991 5727 8 1077 1007 149 115 78 chr17 64558192 64558410 -30714241 - URR1A DNA MER1_type 0 226 1 8 1077 267 31 0 0 chr17 64559079 64559111 -30713540 + (CACG)n Simple_repeat Simple_repeat 1 32 0 8 1077 1660 26 5 0 chr17 64559488 64559679 -30712972 + B2_Mm1t SINE B2 2 193 0 8 1077 340 226 51 7 chr17 64560204 64560342 -30712309 + (TA)n Simple_repeat Simple_repeat 2 145 0 8 1077 188 329 67 2 chr17 64561146 64561231 -30711420 - MIRc SINE MIR -116 152 64 8 1077 654 273 97 16 chr17 64561397 64561654 -30710997 + L1MA7 LINE L1 1 278 -6752 8 1077 334 284 83 95 chr17 64561793 64562057 -30710594 + L1MA7 LINE L1 311 571 -6459 8 1077 1906 179 79 10 chr17 64562522 64562916 -30709735 + MTC LTR MaLR 1 421 0 9 1077 860 289 62 12 chr17 64562919 64563161 -30709490 - MTE2b LTR MaLR -121 258 5 9 1077 1163 62 7 0 chr17 64563246 64563391 -30709260 + B1_Mus2 SINE Alu 2 147 0 9 1077 242 317 61 20 chr17 64563507 64563655 -30708996 + L1M4c LINE L1 1335 1488 -4896 9 1077 275 336 32 0 chr17 64563834 64563959 -30708692 + L1MA7 LINE L1 560 688 -6342 8 1077 621 277 26 32 chr17 64564628 64564818 -30707833 + B3A SINE B2 1 189 -9 9 1077 940 272 104 71 chr17 64565166 64565732 -30706919 + L1MA7 LINE L1 3080 3664 -3439 8 1077 227 231 15 15 chr17 64565773 64565839 -30706812 + L1MA7 LINE L1 3929 3994 -3109 8 1077 377 260 0 0 chr17 64565846 64565923 -30706728 + RSINE1 SINE B4 3 79 -86 9 1077 1019 70 0 14 chr17 64566095 64566239 -30706412 + B1_Mus2 SINE Alu 6 147 0 9 1077 34220 69 3 16 chr17 64566587 64571733 -30700918 + L1Md_F2 LINE L1 511 5585 -298 9 1077 8176 46 1 4 chr17 64571734 64572721 -30699930 + L1Md_F2 LINE L1 5587 6570 -12 9 1077 1489 280 73 113 chr17 64572733 64573139 -30699512 + L1MA7 LINE L1 4236 4640 -2463 8 1077 247 25 50 0 chr17 64573139 64573179 -30699472 + (CAAAA)n Simple_repeat Simple_repeat 3 44 0 9 1077 1489 280 73 113 chr17 64573179 64573277 -30699374 + L1MA7 LINE L1 4641 4742 -2361 8 1077 343 206 206 0 chr17 64573277 64573369 -30699282 + PB1D9 SINE Alu 10 120 0 9 1077 1489 280 73 113 chr17 64573369 64573953 -30698698 + L1MA7 LINE L1 4743 5353 -1750 8 1077 240 35 0 0 chr17 64573953 64573982 -30698669 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 1 1077 1489 280 73 113 chr17 64573982 64574091 -30698560 + L1MA7 LINE L1 5354 5472 -1631 8 1077 1094 311 64 27 chr17 64574534 64575283 -30697368 + L1MA7 LINE L1 5465 6241 -862 8 1077 242 250 28 0 chr17 64575293 64575365 -30697286 + (TATG)n Simple_repeat Simple_repeat 4 77 0 1 1077 1082 216 16 88 chr17 64575373 64575423 -30697228 - B4A SINE B4 -7 285 252 1 1077 1162 94 66 6 chr17 64575423 64575455 -30697196 - B2_Mm2 SINE B2 -2 193 150 1 1077 243 0 0 0 chr17 64575455 64575482 -30697169 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1077 1162 94 66 6 chr17 64575482 64575630 -30697021 - B2_Mm2 SINE B2 -46 149 2 1 1077 1082 216 16 88 chr17 64575630 64575884 -30696767 - B4A SINE B4 -41 251 3 1 1077 530 298 110 12 chr17 64575970 64576215 -30696436 + L1MA7 LINE L1 6362 6630 -621 8 1077 633 225 39 82 chr17 64576229 64576437 -30696214 - Lx7 LINE L1 -1750 5946 5748 1 1077 1810 264 79 19 chr17 64576428 64576957 -30695694 + Lx7 LINE L1 6846 7406 -290 1 1077 207 100 0 0 chr17 64576957 64576987 -30695664 + (GA)n Simple_repeat Simple_repeat 2 31 0 1 1077 25 0 0 0 chr17 64577045 64577070 -30695581 + AT_rich Low_complexity Low_complexity 1 25 0 1 1077 567 38 67 30 chr17 64577118 64577253 -30695398 + (TAGA)n Simple_repeat Simple_repeat 2 141 0 1 1077 466 285 25 19 chr17 64577448 64577609 -30695042 + L1MA7 LINE L1 6737 6898 -353 8 1077 250 299 90 19 chr17 64578179 64578390 -30694261 + LTR78 LTR ERV1 1020 1245 -59 1 1077 1735 171 41 44 chr17 64578475 64578886 -30693765 + RMER17C LTR ERVK 1 410 0 1 1077 307 250 0 43 chr17 64579519 64579611 -30693040 + Lx8 LINE L1 6951 7038 -435 1 1077 418 320 61 22 chr17 64579733 64579963 -30692688 + Lx8 LINE L1 7207 7445 -28 1 1077 714 224 191 40 chr17 64579988 64580286 -30692365 - MTE2b LTR MaLR -36 343 1 1 1077 766 283 102 50 chr17 64580303 64580638 -30692013 - L1MB1 LINE L1 -204 5964 5599 1 1077 620 202 177 16 chr17 64580638 64580824 -30691827 - B3 SINE B2 0 216 1 1 1077 766 283 102 50 chr17 64580824 64580889 -30691762 - L1MB1 LINE L1 -570 5598 5543 1 1077 220 306 81 27 chr17 64581545 64581619 -30691032 - ID4_ SINE ID -4 79 2 1 1077 2959 158 78 22 chr17 64581823 64582609 -30690042 + L1_Mur3 LINE L1 1007 1831 -4049 1 1077 757 156 15 0 chr17 64582609 64582744 -30689907 - MTC LTR MaLR -89 332 196 1 1077 37 0 0 0 chr17 64582746 64582783 -30689868 + AT_rich Low_complexity Low_complexity 1 37 0 1 1077 3568 59 0 0 chr17 64582783 64583227 -30689424 - L1Md_F2 LINE L1 -2 6580 6137 1 1077 1154 144 35 5 chr17 64583227 64583430 -30689221 - MTC LTR MaLR -212 209 1 1 1077 5346 181 62 30 chr17 64583430 64584644 -30688007 - MTC-int LTR MaLR 0 1258 6 1 1077 575 219 38 82 chr17 64584649 64584723 -30687928 - MTC LTR MaLR -2 419 344 1 1077 3441 35 2 0 chr17 64584723 64585118 -30687533 - MTA_Mm LTR MaLR 0 396 1 1 1077 575 219 38 82 chr17 64585118 64585202 -30687449 - MTC LTR MaLR -78 343 268 1 1077 6169 137 75 3 chr17 64585212 64585534 -30687117 + L1_Mur3 LINE L1 3500 3875 -2005 1 1077 204 40 0 0 chr17 64585534 64585559 -30687092 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1077 6169 137 75 3 chr17 64585559 64586326 -30686325 + L1_Mur3 LINE L1 3876 4667 -1213 1 1077 2477 168 62 40 chr17 64586322 64586868 -30685783 + L1_Mur3 LINE L1 4910 5467 -413 1 1077 339 25 0 0 chr17 64586886 64586926 -30685725 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1077 5577 214 57 87 chr17 64586933 64588485 -30684166 + Lx7 LINE L1 6190 7695 -1 1 1077 611 261 355 11 chr17 64590413 64590680 -30681971 - ORR1D2 LTR MaLR -7 363 5 1 1077 300 206 32 0 chr17 64590807 64590870 -30681781 - ID4_ SINE ID -14 69 5 1 1077 441 0 0 0 chr17 64590889 64590938 -30681713 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1077 649 243 78 100 chr17 64592778 64592874 -30679777 - B4A SINE B4 -28 264 170 1 1077 774 150 287 6 chr17 64592874 64593048 -30679603 - URR1B DNA MER1_type -1 224 2 1 1077 649 243 78 100 chr17 64593048 64593221 -30679430 - B4A SINE B4 -123 169 1 1 1077 213 39 0 0 chr17 64595096 64595122 -30677529 + (TC)n Simple_repeat Simple_repeat 2 27 0 1 1077 189 0 0 0 chr17 64595795 64595816 -30676835 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1077 1105 111 21 57 chr17 64596790 64596982 -30675669 - B2_Mm2 SINE B2 -7 188 4 1 1077 564 29 0 0 chr17 64597891 64597961 -30674690 + (CA)n Simple_repeat Simple_repeat 2 71 0 1 1077 2321 183 40 28 chr17 64598786 64599287 -30673364 - RMER15 LTR ERVL -42 533 27 1 1077 213 39 0 0 chr17 64600301 64600327 -30672324 + (CCCA)n Simple_repeat Simple_repeat 1 26 0 1 1077 628 215 214 6 chr17 64600804 64600977 -30671674 - B3 SINE B2 -7 209 1 1 1077 765 206 25 45 chr17 64601654 64601852 -30670799 - Lx9 LINE L1 -445 7199 7006 1 1077 2324 220 38 24 chr17 64601876 64602426 -30670225 - Lx9 LINE L1 -844 6800 6243 1 1077 21 0 0 0 chr17 64602439 64602460 -30670191 + AT_rich Low_complexity Low_complexity 1 21 0 1 1077 555 233 65 52 chr17 64602552 64602706 -30669945 - RLTR20A2 LTR ERVK 0 578 423 1 1077 348 183 64 26 chr17 64602688 64602786 -30669865 - RLTR20A2 LTR ERVK -228 306 207 1 1077 5802 213 67 121 chr17 64602786 64603875 -30668776 - L1_Rod LINE L1 -927 4920 3849 1 1077 1014 111 21 0 chr17 64603875 64604019 -30668632 - B1_Mur4 SINE Alu 0 150 4 1 1077 5802 213 67 121 chr17 64604019 64604149 -30668502 - L1_Rod LINE L1 -1999 3848 3751 1 1077 1397 86 5 0 chr17 64604149 64604335 -30668316 + B2_Mm1a SINE B2 1 187 -6 1 1077 5802 213 67 121 chr17 64604335 64604758 -30667893 - L1_Rod LINE L1 -2097 3750 3369 1 1077 378 61 0 0 chr17 64604758 64604807 -30667844 + (TTCA)n Simple_repeat Simple_repeat 3 51 0 1 1077 5802 213 67 121 chr17 64604807 64604990 -30667661 - L1_Rod LINE L1 -2479 3368 3192 1 1077 1177 54 0 20 chr17 64604990 64605141 -30667510 - B1_Mus1 SINE Alu 0 148 1 1 1077 5802 213 67 121 chr17 64605141 64605742 -30666909 - L1_Rod LINE L1 -2656 3191 2624 1 1077 1942 135 87 0 chr17 64605747 64606102 -30666549 + ORR1B1 LTR MaLR 1 386 -8 1 1077 2323 187 30 30 chr17 64606198 64606733 -30665918 - L1_Rod LINE L1 -3248 2599 2065 1 1077 416 206 51 10 chr17 64606727 64606825 -30665826 - L1_Rod LINE L1 -6666 942 841 1 1077 526 325 7 0 chr17 64606900 64607054 -30665597 - L1_Rod LINE L1 -6919 689 535 1 1077 183 114 0 0 chr17 64607060 64607095 -30665556 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1077 2452 102 3 0 chr17 64607298 64607621 -30665030 + ORR1A2 LTR MaLR 1 324 -3 1 1077 613 306 45 94 chr17 64607741 64607965 -30664686 + ID_B1 SINE B4 2 214 -10 1 1077 438 36 0 0 chr17 64607979 64608035 -30664616 + (CAA)n Simple_repeat Simple_repeat 2 57 0 1 1077 207 0 0 0 chr17 64608394 64608417 -30664234 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1 1077 2521 79 6 11 chr17 64608417 64608764 -30663887 - Lx LINE L1 -15 6639 6292 1 1077 2110 127 69 0 chr17 64609656 64610017 -30662634 + ORR1B1 LTR MaLR 1 386 -8 1 1077 430 143 9 37 chr17 64611099 64611208 -30661443 + GA-rich Low_complexity Low_complexity 3 108 0 1 1077 966 156 13 20 chr17 64612762 64612912 -30659739 - B1_Mur4 SINE Alu 0 150 2 1 1077 3901 43 20 2 chr17 64613033 64613520 -30659131 + LTRIS2 LTR ERV1 69 564 0 1 1077 280 204 482 0 chr17 64613733 64613816 -30658835 + B3 SINE B2 2 124 -92 1 1077 680 222 53 23 chr17 64613950 64614121 -30658530 - RMER21B LTR ERV1 -345 497 322 1 1077 243 0 0 0 chr17 64614146 64614173 -30658478 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1077 1076 94 0 0 chr17 64614173 64614311 -30658340 - B1_Mus2 SINE Alu -9 138 1 1 1077 198 0 0 0 chr17 64614366 64614388 -30658263 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 1077 266 335 68 31 chr17 64614644 64614835 -30657816 + MLT1K LTR MaLR 324 521 -74 1 1077 1303 27 0 7 chr17 64615434 64615581 -30657070 + B1_Mus2 SINE Alu 2 147 0 1 1077 234 0 0 0 chr17 64615581 64615607 -30657044 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1077 939 247 114 11 chr17 64616244 64616506 -30656145 + B4 SINE B4 3 291 -1 1 1077 315 127 0 0 chr17 64616533 64616596 -30656055 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 1077 251 175 0 0 chr17 64616792 64616832 -30655819 + G-rich Low_complexity Low_complexity 1 40 0 1 1077 284 324 34 54 chr17 64616950 64617097 -30655554 - MER73 LTR ERVL -1 900 757 1 1077 884 282 143 46 chr17 64617195 64617773 -30654878 - MER73 LTR ERVL -194 707 1 1 1077 369 0 0 0 chr17 64618180 64618221 -30654430 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1077 578 286 50 38 chr17 64618240 64618400 -30654251 - B3A SINE B2 -36 162 1 1 1078 189 74 0 0 chr17 64618506 64618533 -30654118 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 1078 315 0 0 0 chr17 64618537 64618572 -30654079 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1078 387 250 25 0 chr17 64618573 64618653 -30653998 - ID4 SINE ID -1 82 1 1 1078 425 193 0 33 chr17 64618883 64618974 -30653677 - L1MC4 LINE L1 -188 7854 7767 1 1078 885 189 337 25 chr17 64619342 64619624 -30653027 - ORR1D1 LTR MaLR 0 374 5 1 1078 23 0 0 0 chr17 64619691 64619714 -30652937 + AT_rich Low_complexity Low_complexity 1 23 0 1 1078 294 303 99 40 chr17 64619981 64620239 -30652412 - L1MC4a LINE L1 -1286 6709 6442 1 1078 21 0 0 0 chr17 64620571 64620592 -30652059 + AT_rich Low_complexity Low_complexity 1 21 0 1 1078 189 224 0 0 chr17 64622730 64622788 -30649863 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 1078 2168 122 104 19 chr17 64622880 64623246 -30649405 + RMER10B LTR ERVL 1 397 -1 1 1078 523 308 216 18 chr17 64623779 64624156 -30648495 - FordPrefect DNA Tip100 -172 1511 1042 1 1078 339 25 0 0 chr17 64624156 64624196 -30648455 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1078 523 308 216 18 chr17 64624196 64624314 -30648337 - FordPrefect DNA Tip100 -642 1041 920 1 1078 180 125 0 0 chr17 64625434 64625466 -30647185 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1078 438 36 0 0 chr17 64625609 64625665 -30646986 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 1078 315 0 0 0 chr17 64625665 64625699 -30646952 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1078 532 340 102 34 chr17 64626631 64626984 -30645667 + LTR40a LTR ERVL 1 377 -142 1 1078 459 0 0 0 chr17 64628279 64628330 -30644321 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1078 873 72 0 0 chr17 64629005 64629116 -30643535 + B1_Mus1 SINE Alu 1 111 -37 1 1078 252 309 55 97 chr17 64629126 64629291 -30643360 + L3 LINE CR1 3491 3648 -841 1 1078 28 0 0 0 chr17 64632204 64632232 -30640419 + AT_rich Low_complexity Low_complexity 1 28 0 1 1078 29 0 0 0 chr17 64632663 64632692 -30639959 + AT_rich Low_complexity Low_complexity 1 29 0 1 1078 387 0 0 0 chr17 64632993 64633036 -30639615 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1078 180 330 107 0 chr17 64635098 64635201 -30637450 - MIRb SINE MIR -2 266 153 1 1078 27 29 0 0 chr17 64636705 64636739 -30635912 + AT_rich Low_complexity Low_complexity 1 34 0 1 1078 216 122 0 0 chr17 64636739 64636780 -30635871 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1078 353 270 137 78 chr17 64637831 64637908 -30634743 + L1M3 LINE L1 5539 5609 -574 1 1078 1051 130 0 14 chr17 64637908 64638056 -30634595 + B1_Mur4 SINE Alu 1 146 -4 1 1078 191 32 0 61 chr17 64638057 64638090 -30634561 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1 1078 353 270 137 78 chr17 64638090 64638215 -30634436 + L1M3 LINE L1 5610 5755 -428 1 1078 216 111 0 0 chr17 64638219 64638255 -30634396 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1078 254 274 71 40 chr17 64638346 64638445 -30634206 + Charlie2b DNA MER1_type 2138 2239 -543 1 1078 413 253 84 32 chr17 64638526 64638681 -30633970 - RSINE1 SINE B4 -2 163 1 2 1078 207 0 0 0 chr17 64639388 64639411 -30633240 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1078 481 241 52 26 chr17 64640114 64640229 -30632422 + PB1D9 SINE Alu 3 120 0 2 1078 761 74 9 36 chr17 64641090 64641202 -30631449 + B1_Mus1 SINE Alu 39 147 -1 2 1078 302 217 33 88 chr17 64641222 64641313 -30631338 + L1MC4 LINE L1 7179 7264 -618 2 1078 781 296 89 40 chr17 64641370 64641962 -30630689 + L1MC4 LINE L1 7413 8033 -9 2 1078 344 301 41 88 chr17 64642540 64642711 -30629940 + RSINE1 SINE B4 3 165 0 2 1078 240 307 76 55 chr17 64642809 64642954 -30629697 - B4A SINE B4 -22 270 123 2 1078 24 32 0 0 chr17 64642961 64642992 -30629659 + AT_rich Low_complexity Low_complexity 1 31 0 2 1078 4816 75 88 24 chr17 64643263 64643920 -30628731 - L1_Mus3 LINE L1 -7 6631 5933 2 1078 253 289 13 0 chr17 64643991 64644067 -30628584 - B3A SINE B2 -121 77 1 2 1078 360 0 0 0 chr17 64644251 64644291 -30628360 + (TC)n Simple_repeat Simple_repeat 1 40 0 2 1078 261 0 0 0 chr17 64644291 64644320 -30628331 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1078 233 333 15 0 chr17 64645018 64645084 -30627567 - ID4 SINE ID -12 71 5 2 1078 30 27 0 0 chr17 64645151 64645188 -30627463 + AT_rich Low_complexity Low_complexity 1 37 0 2 1078 556 305 80 25 chr17 64645788 64646114 -30626537 + L1M2 LINE L1 4056 4399 -1744 2 1078 457 294 54 7 chr17 64646226 64646373 -30626278 + MER58A DNA MER1_type 70 223 -1 2 1078 679 201 22 0 chr17 64646687 64646826 -30625825 + URR1B DNA MER1_type 83 224 -1 2 1078 5208 171 47 14 chr17 64647529 64647642 -30625009 + Lx2B LINE L1 6038 6152 -848 2 1078 180 111 0 0 chr17 64647642 64647669 -30624982 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 1078 5208 171 47 14 chr17 64647669 64648486 -30624165 + Lx2B LINE L1 6153 6997 -3 2 1078 1277 48 0 0 chr17 64648645 64648791 -30623860 - B1_Mm SINE Alu 0 147 2 2 1078 263 212 0 175 chr17 64649215 64649335 -30623316 + MER57C2 LTR ERV1 330 428 -6 2 1078 22 56 0 0 chr17 64650257 64650293 -30622358 + AT_rich Low_complexity Low_complexity 1 36 0 2 1078 451 180 0 63 chr17 64650853 64650948 -30621703 - PB1D9 SINE Alu -6 114 26 2 1078 344 280 13 0 chr17 64651327 64651402 -30621249 - ID4_ SINE ID -6 77 2 2 1078 330 269 57 40 chr17 64651404 64651528 -30621123 - B1F SINE Alu 0 149 24 2 1078 440 323 29 43 chr17 64651777 64651984 -30620667 + AmnSINE1 SINE SINE 254 457 -118 2 1078 804 238 65 5 chr17 64652084 64652270 -30620381 - B3 SINE B2 -6 210 14 2 1078 270 341 0 11 chr17 64652822 64652911 -30619740 - ID_B1 SINE B4 -9 215 128 2 1078 1204 68 7 0 chr17 64653311 64653457 -30619194 + B1_Mus2 SINE Alu 1 147 0 2 1078 194 0 39 0 chr17 64653468 64653494 -30619157 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1078 1551 34 56 0 chr17 64654640 64654819 -30617832 + B2_Mm2 SINE B2 2 190 -5 2 1078 180 77 0 0 chr17 64655053 64655079 -30617572 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1078 187 300 140 0 chr17 64655330 64655430 -30617221 + MIR SINE MIR 50 163 -99 2 1078 376 253 21 21 chr17 64655449 64655542 -30617109 - PB1D10 SINE Alu -2 115 23 2 1078 31 76 0 0 chr17 64655692 64655758 -30616893 + AT_rich Low_complexity Low_complexity 1 66 0 2 1078 1137 293 124 80 chr17 64655958 64656236 -30616415 + Lx8 LINE L1 4752 5069 -811 2 1078 1124 94 0 7 chr17 64656236 64656376 -30616275 + B1_Mus2 SINE Alu 1 139 -8 2 1078 1137 293 124 80 chr17 64656376 64656889 -30615762 + Lx8 LINE L1 5070 5616 -264 2 1078 3462 38 10 0 chr17 64656889 64657281 -30615370 + MTA_Mm LTR MaLR 1 396 0 2 1078 1137 293 124 80 chr17 64657281 64657360 -30615291 + Lx8 LINE L1 5617 5671 -209 2 1078 686 267 12 42 chr17 64657360 64657528 -30615123 - RSINE1 SINE B4 0 165 3 2 1078 1137 299 117 71 chr17 64657528 64657760 -30614891 + Lx8 LINE L1 5672 5908 -1565 2 1078 1610 251 65 96 chr17 64661088 64661973 -30610678 - RMER17B LTR ERVK -43 863 1 2 1078 231 289 0 0 chr17 64662226 64662278 -30610373 - ID_B1 SINE B4 -94 130 79 2 1078 317 352 136 10 chr17 64662331 64662529 -30610122 + Charlie7 DNA MER1_type 266 488 -2124 2 1078 1107 242 131 15 chr17 64662692 64663050 -30609601 + MTD LTR MaLR 4 396 -23 2 1078 2054 78 85 0 chr17 64663848 64664142 -30608509 - ORR1A2 LTR MaLR -8 319 1 2 1078 399 289 122 47 chr17 64664284 64664498 -30608153 - L2 LINE L2 -518 2901 2672 2 1078 3774 174 83 6 chr17 64664881 64665592 -30607059 + Lx5 LINE L1 6285 7050 0 2 1078 293 261 21 32 chr17 64667872 64667967 -30604684 + B1_Mur1 SINE Alu 52 145 -4 2 1078 184 100 24 24 chr17 64667988 64668029 -30604622 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 2 1078 1107 196 291 93 chr17 64669209 64669603 -30603048 + MT2A LTR ERVL 1 484 -49 2 1078 180 111 0 0 chr17 64669603 64669630 -30603021 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1078 1107 196 291 93 chr17 64669630 64669678 -30602973 + MT2A LTR ERVL 485 531 -2 2 1078 399 335 163 25 chr17 64669851 64670090 -30602561 + MLT1F1 LTR MaLR 97 368 -201 2 1078 207 0 0 0 chr17 64670885 64670908 -30601743 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 1078 411 193 0 0 chr17 64670914 64670997 -30601654 + (TG)n Simple_repeat Simple_repeat 2 84 0 2 1078 2668 159 73 44 chr17 64670998 64671402 -30601249 + Lx9 LINE L1 6531 6957 -687 2 1078 1928 62 185 0 chr17 64671402 64671678 -30600973 - ORR1A2 LTR MaLR 0 327 1 2 1078 2668 159 73 44 chr17 64671678 64671864 -30600787 + Lx9 LINE L1 6958 7138 -506 2 1078 623 133 11 0 chr17 64672019 64672109 -30600542 - B3 SINE B2 -124 92 2 2 1078 314 324 60 69 chr17 64672221 64672453 -30600198 - L1MD LINE L1 -1512 4634 4405 2 1078 351 233 135 10 chr17 64672500 64672604 -30600047 - B1_Mur1 SINE Alu 0 149 33 2 1078 228 208 38 0 chr17 64673320 64673373 -30599278 - L1MC LINE L1 -2691 3455 3401 2 1078 505 164 132 111 chr17 64673382 64673526 -30599125 + B1_Mur2 SINE Alu 3 149 0 2 1078 340 279 102 91 chr17 64673527 64673791 -30598860 - L1MD LINE L1 -2741 3405 3139 2 1078 285 314 25 67 chr17 64673943 64674226 -30598425 - Lx8 LINE L1 0 7473 7203 2 1078 656 236 7 7 chr17 64674234 64674383 -30598268 - Lx8 LINE L1 -250 7223 7075 2 1078 189 0 0 0 chr17 64674399 64674420 -30598231 + (TTG)n Simple_repeat Simple_repeat 2 22 0 2 1078 361 301 143 50 chr17 64674852 64675309 -30597342 + L1ME1 LINE L1 858 1372 -4870 2 1078 422 204 67 11 chr17 64675323 64675412 -30597239 + B3A SINE B2 51 144 -54 2 1078 228 167 0 0 chr17 64675463 64675499 -30597152 + B3A SINE B2 6 41 -157 2 1078 394 293 106 0 chr17 64675467 64675590 -30597061 + RSINE1 SINE B4 11 146 -19 2 1078 349 244 144 0 chr17 64675761 64675851 -30596800 + PB1D10 SINE Alu 11 113 -4 2 1078 23 54 0 0 chr17 64675851 64675888 -30596763 + AT_rich Low_complexity Low_complexity 1 37 0 2 1078 727 286 17 101 chr17 64676505 64676793 -30595858 - B4A SINE B4 -23 269 6 2 1078 274 296 130 27 chr17 64676833 64677201 -30595450 + L1ME1 LINE L1 4724 5129 -1017 2 1078 897 216 18 0 chr17 64677266 64677437 -30595214 - B3A SINE B2 -24 174 1 2 1078 438 263 42 17 chr17 64677684 64677804 -30594847 + B1F SINE Alu 26 148 -1 2 1078 368 273 152 39 chr17 64677940 64678163 -30594488 + L1ME1 LINE L1 5599 5831 -348 2 1078 243 0 0 0 chr17 64678163 64678190 -30594461 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1078 368 273 152 39 chr17 64678190 64678374 -30594277 + L1ME1 LINE L1 5832 6051 -128 2 1078 207 0 0 0 chr17 64678397 64678420 -30594231 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 1078 186 167 0 0 chr17 64678645 64678681 -30593970 + A-rich Low_complexity Low_complexity 1 36 0 2 1078 355 315 94 0 chr17 64678727 64678876 -30593775 + RSINE1 SINE B4 2 164 -1 2 1078 222 91 0 0 chr17 64680582 64680615 -30592036 + (TGGGGG)n Simple_repeat Simple_repeat 3 35 0 2 1078 21 0 0 0 chr17 64680916 64680937 -30591714 + GC_rich Low_complexity Low_complexity 1 21 0 2 1078 402 139 0 0 chr17 64681232 64681304 -30591347 + (CGG)n Simple_repeat Simple_repeat 3 74 0 2 1078 1610 221 76 130 chr17 64682692 64683286 -30589365 + MT2B LTR ERVL 37 598 -3 2 1078 235 342 58 53 chr17 64683339 64683546 -30589105 - MER113 DNA MER1_type -313 208 1 2 1078 251 309 87 19 chr17 64683558 64683752 -30588899 + MIR SINE MIR 21 239 -29 2 1078 1208 126 21 0 chr17 64683909 64684099 -30588552 - B2_Mm2 SINE B2 0 195 2 2 1078 1890 125 27 30 chr17 64684153 64684483 -30588168 + ORR1A4 LTR MaLR 1 329 0 2 1078 242 271 105 12 chr17 64684502 64684588 -30588063 + MER5A DNA MER1_type 96 189 0 2 1078 1129 179 32 9 chr17 64684692 64684912 -30587739 + URR1B DNA MER1_type 1 225 0 2 1078 244 143 0 39 chr17 64685140 64685191 -30587460 - MT2B LTR ERVL 0 601 553 2 1078 297 287 125 13 chr17 64685697 64685849 -30586802 + MER33 DNA MER1_type 1 169 -155 2 1078 356 344 100 74 chr17 64686669 64687008 -30585643 - MLT1N2 LTR MaLR -214 348 1 2 1078 2597 130 31 14 chr17 64687196 64687610 -30585041 - MTC LTR MaLR 0 421 1 2 1078 983 144 0 0 chr17 64687770 64687916 -30584735 + B1_Mus1 SINE Alu 3 148 0 2 1078 294 95 0 0 chr17 64688240 64688282 -30584369 + (T)n Simple_repeat Simple_repeat 1 42 0 2 1078 500 40 51 26 chr17 64688282 64688360 -30584291 - B1_Mur4 SINE Alu 0 150 71 2 1078 423 292 181 50 chr17 64688360 64688598 -30584053 - MER21B LTR ERV1 -161 702 434 2 1078 1236 41 0 0 chr17 64688600 64688747 -30583904 + B1_Mus1 SINE Alu 1 147 -1 2 1078 735 291 59 0 chr17 64688823 64689026 -30583625 - MER21B LTR ERV1 -629 234 20 2 1078 1331 85 11 0 chr17 64689743 64689919 -30582732 + B2_Mm1t SINE B2 2 179 -14 2 1078 426 65 309 9 chr17 64689962 64690067 -30582584 + B2_Mm2 SINE B2 47 186 -9 2 1078 345 258 0 0 chr17 64690293 64690413 -30582238 + (CA)n Simple_repeat Simple_repeat 1 120 0 2 1078 2889 49 0 0 chr17 64690750 64691096 -30581555 - ORR1A1 LTR MaLR 0 346 1 2 1078 669 25 0 0 chr17 64691522 64691601 -30581050 + (TC)n Simple_repeat Simple_repeat 1 79 0 2 1078 7716 52 0 6 chr17 64691785 64692787 -30579864 - L1Md_F2 LINE L1 0 6582 5587 2 1078 229 205 58 52 chr17 64692867 64692955 -30579696 - ID4 SINE ID -66 86 1 3 1078 442 358 36 56 chr17 64693863 64694165 -30578486 + MLT1D LTR MaLR 3 298 -207 3 1078 220 141 0 45 chr17 64694169 64694236 -30578415 + G-rich Low_complexity Low_complexity 1 64 0 3 1078 414 302 13 4 chr17 64694236 64694356 -30578295 + MLT1D LTR MaLR 315 551 -73 3 1078 433 231 0 0 chr17 64694356 64694434 -30578217 + ID4_ SINE ID 2 79 -4 3 1078 280 302 137 115 chr17 64694434 64694520 -30578131 + MLT1D LTR MaLR 552 624 0 3 1078 323 279 29 115 chr17 64694592 64694616 -30578035 - B2_Mm2 SINE B2 -16 179 158 3 1078 318 50 0 0 chr17 64694616 64694656 -30577995 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1078 321 26 0 0 chr17 64694656 64694693 -30577958 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 1078 555 279 29 115 chr17 64694693 64694841 -30577810 - B3A SINE B2 -38 160 22 3 1078 21 0 0 0 chr17 64694928 64694949 -30577702 + AT_rich Low_complexity Low_complexity 1 21 0 3 1078 25 65 0 0 chr17 64695070 64695116 -30577535 + AT_rich Low_complexity Low_complexity 1 46 0 3 1078 225 83 0 0 chr17 64695158 64695194 -30577457 + (TC)n Simple_repeat Simple_repeat 1 36 0 3 1078 207 0 0 0 chr17 64695194 64695217 -30577434 + (TA)n Simple_repeat Simple_repeat 2 24 0 3 1078 243 0 0 0 chr17 64695217 64695243 -30577408 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1078 228 247 96 53 chr17 64695380 64695474 -30577177 - MLT1J LTR MaLR -29 483 386 3 1078 237 333 26 0 chr17 64695626 64695704 -30576947 - MLT1J LTR MaLR -333 179 100 3 1078 862 312 34 2 chr17 64695872 64696280 -30576371 + L1MD LINE L1 2617 3037 -3109 3 1078 418 328 83 22 chr17 64696288 64696469 -30576182 + B3A SINE B2 1 192 -6 3 1078 180 143 0 0 chr17 64696523 64696565 -30576086 + (A)n Simple_repeat Simple_repeat 1 42 0 3 1078 33607 71 6 4 chr17 64697044 64703002 -30569649 - L1Md_F2 LINE L1 0 6582 223 3 1078 756 317 70 49 chr17 64703024 64703592 -30569059 + L1MC3 LINE L1 6770 7349 -436 3 1078 374 318 80 25 chr17 64703632 64703871 -30568780 + L1MC3 LINE L1 7430 7681 -104 3 1078 3904 51 4 6 chr17 64704248 64704737 -30567914 - L1Md_F3 LINE L1 -15 6569 6082 3 1078 351 113 0 0 chr17 64704906 64704959 -30567692 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 1078 7680 155 35 22 chr17 64705025 64706468 -30566183 - Lx5 LINE L1 -3 7047 5587 3 1078 10095 158 46 20 chr17 64706477 64708794 -30563857 - L1_Mur3 LINE L1 -2518 3359 984 3 1078 474 131 0 0 chr17 64710174 64710273 -30562378 + (CAGA)n Simple_repeat Simple_repeat 4 102 0 3 1078 438 323 0 84 chr17 64710389 64710531 -30562120 + RSINE1 SINE B4 3 132 -33 3 1078 259 273 76 0 chr17 64710846 64710912 -30561739 - ID4_ SINE ID -10 73 3 3 1078 189 0 0 0 chr17 64712324 64712345 -30560306 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1078 22 56 0 0 chr17 64713053 64713089 -30559562 + AT_rich Low_complexity Low_complexity 1 36 0 3 1078 221 258 61 0 chr17 64713092 64713158 -30559493 - MIRb SINE MIR -105 163 94 3 1078 418 347 12 6 chr17 64713174 64713342 -30559309 - MLT1F1 LTR MaLR -400 169 1 3 1078 202 146 0 24 chr17 64713856 64713898 -30558753 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 3 1078 8951 113 12 6 chr17 64713919 64715901 -30556750 + L1Md_F LINE L1 181 2613 -3270 3 1078 5010 69 2 0 chr17 64715901 64716540 -30556111 + L1_Mus2 LINE L1 5927 6566 0 3 1078 40 87 0 0 chr17 64716559 64716662 -30555989 + AT_rich Low_complexity Low_complexity 1 103 0 3 1078 216 0 0 0 chr17 64716749 64716773 -30555878 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 1078 227 103 26 0 chr17 64717343 64717382 -30555269 + (CCCCCT)n Simple_repeat Simple_repeat 4 43 0 3 1078 423 306 67 0 chr17 64717396 64717530 -30555121 + LTR84a LTR ERVL 72 214 -543 3 1078 278 372 167 9 chr17 64717527 64717850 -30554801 + LTR84a LTR ERVL 325 698 -63 3 1078 531 0 0 0 chr17 64718517 64718576 -30554075 + (GA)n Simple_repeat Simple_repeat 2 60 0 3 1078 1220 122 94 20 chr17 64719155 64719435 -30553216 + ORR1B2 LTR MaLR 1 359 -8 3 1078 2025 114 47 3 chr17 64720702 64721046 -30551605 - RLTR15 LTR ERVK 0 359 1 3 1078 522 220 59 15 chr17 64722260 64722424 -30550227 - Lx7 LINE L1 -6 7690 7535 3 1078 562 174 0 26 chr17 64722465 64722775 -30549876 + (CA)n Simple_repeat Simple_repeat 1 301 0 3 1078 1655 211 9 15 chr17 64722775 64723112 -30549539 - Lx7 LINE L1 -264 7432 7098 3 1078 180 0 0 0 chr17 64723112 64723132 -30549519 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1078 1300 54 0 0 chr17 64723132 64723279 -30549372 - B1_Mm SINE Alu 0 147 1 3 1078 1020 162 182 5 chr17 64723367 64723559 -30549092 - URR1A DNA MER1_type 0 226 1 3 1078 426 39 0 0 chr17 64723798 64723850 -30548801 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1078 622 319 104 23 chr17 64725158 64725379 -30547272 + B4A SINE B4 28 266 -26 3 1078 495 118 0 0 chr17 64725387 64725463 -30547188 + (CA)n Simple_repeat Simple_repeat 2 77 0 3 1078 211 182 0 0 chr17 64726162 64726195 -30546456 + polypyrimidine Low_complexity Low_complexity 1 33 0 3 1078 22 0 0 0 chr17 64726975 64726997 -30545654 + AT_rich Low_complexity Low_complexity 1 22 0 3 1078 4652 134 74 7 chr17 64727322 64728336 -30544315 + L1VL2 LINE L1 95 1190 -2425 3 1078 20925 98 6 9 chr17 64728333 64732151 -30540500 + L1_Mus3 LINE L1 2829 6636 -2 3 1078 1049 44 0 7 chr17 64732171 64732307 -30540344 + (GAA)n Simple_repeat Simple_repeat 1 135 0 3 1078 1004 303 83 29 chr17 64734722 64735202 -30537449 - Lx8 LINE L1 -1 7472 6967 3 1078 432 331 167 35 chr17 64735742 64736083 -30536568 - MLT1G1 LTR MaLR -5 574 189 3 1078 27 29 0 0 chr17 64736276 64736310 -30536341 + AT_rich Low_complexity Low_complexity 1 34 0 3 1078 1167 72 105 23 chr17 64736365 64736537 -30536114 - B2_Mm2 SINE B2 -9 186 1 3 1078 882 156 0 27 chr17 64738536 64738555 -30534096 + polypyrimidine Low_complexity Low_complexity 162 180 0 3 1078 3953 50 73 0 chr17 64738555 64739032 -30533619 - RLTR1B LTR ERV1 0 512 1 3 1078 882 156 0 27 chr17 64739032 64739197 -30533454 + CT-rich Low_complexity Low_complexity 1 161 0 3 1078 2130 150 30 16 chr17 64739198 64739564 -30533087 - Lx LINE L1 0 6654 6284 3 1078 2543 156 26 5 chr17 64739577 64740040 -30532611 + ORR1B1-int LTR MaLR 161 629 -741 3 1078 1446 62 17 11 chr17 64740040 64740219 -30532432 + B2_Mm2 SINE B2 1 180 -15 3 1078 225 0 0 0 chr17 64740222 64740247 -30532404 + (CAAAG)n Simple_repeat Simple_repeat 2 26 0 3 1078 2102 224 39 44 chr17 64740247 64740325 -30532326 + ORR1B1-int LTR MaLR 630 703 -667 3 1078 383 216 45 11 chr17 64740329 64740418 -30532233 - B3A SINE B2 -106 92 1 3 1078 234 0 0 0 chr17 64740595 64740621 -30532030 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 1078 354 23 0 0 chr17 64740621 64740663 -30531988 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1078 3407 51 18 0 chr17 64740958 64741350 -30531301 - MTB LTR MaLR -1 399 1 3 1078 261 0 0 0 chr17 64741886 64741915 -30530736 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1078 365 297 76 13 chr17 64742221 64742446 -30530205 - L1M5 LINE L1 -1590 4556 4318 3 1078 1148 219 0 5 chr17 64743266 64743472 -30529179 - B3 SINE B2 -11 205 1 3 1078 234 0 0 0 chr17 64743761 64743787 -30528864 + (TC)n Simple_repeat Simple_repeat 2 27 0 3 1078 444 37 0 0 chr17 64743787 64743840 -30528811 + (TA)n Simple_repeat Simple_repeat 1 54 0 3 1078 339 25 0 0 chr17 64743902 64743942 -30528709 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 1078 315 0 0 0 chr17 64743942 64743976 -30528675 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1078 447 299 47 47 chr17 64744548 64744720 -30527931 + MLT1A LTR MaLR 1 172 -202 3 1078 709 113 14 0 chr17 64744775 64744916 -30527735 + (TC)n Simple_repeat Simple_repeat 2 144 0 3 1078 247 316 71 0 chr17 64744985 64745083 -30527568 + MLT1A LTR MaLR 284 388 -2 3 1078 232 292 26 53 chr17 64746053 64746129 -30526522 + MLT1N2 LTR MaLR 85 158 -404 3 1078 585 168 15 8 chr17 64746405 64746537 -30526114 + GA-rich Low_complexity Low_complexity 2 134 0 3 1078 759 192 17 0 chr17 64746549 64746726 -30525925 + GA-rich Low_complexity Low_complexity 1 180 0 3 1078 403 302 115 16 chr17 64747524 64747706 -30524945 - MIRb SINE MIR -15 253 54 3 1078 291 157 0 0 chr17 64747827 64747878 -30524773 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 1078 672 265 32 11 chr17 64748936 64749123 -30523528 + B3A SINE B2 2 192 -6 3 1079 259 215 108 0 chr17 64749703 64749861 -30522790 + (CAGTG)n Simple_repeat Simple_repeat 4 178 0 3 1079 523 261 110 41 chr17 64750087 64750526 -30522125 - Lx7 LINE L1 0 7696 7132 3 1079 257 363 87 16 chr17 64750550 64750735 -30521916 - MIR SINE MIR -51 211 14 3 1079 192 280 0 0 chr17 64752511 64752561 -30520090 + MIRc SINE MIR 194 243 -25 3 1079 362 120 13 0 chr17 64752578 64752653 -30519998 + (TC)n Simple_repeat Simple_repeat 1 76 0 3 1079 1863 217 36 81 chr17 64752705 64753201 -30519450 + RMER19C LTR ERVK 138 611 0 3 1079 909 277 57 32 chr17 64753271 64753551 -30519100 - Lx6 LINE L1 0 7460 7174 3 1079 2583 159 58 24 chr17 64753950 64754451 -30518200 + RMER1C Other Other 824 1341 -1 3 1079 1958 229 5 20 chr17 64754456 64754733 -30517918 - Lx6 LINE L1 -305 7155 6883 3 1079 465 19 0 0 chr17 64754733 64754787 -30517864 + (TC)n Simple_repeat Simple_repeat 2 55 0 3 1079 1958 229 5 20 chr17 64754787 64754918 -30517733 - Lx6 LINE L1 -578 6882 6753 3 1079 217 246 18 0 chr17 64754948 64755005 -30517646 + GA-rich Low_complexity Low_complexity 2 59 0 3 1079 2029 158 63 11 chr17 64755012 64755376 -30517275 - Lx6 LINE L1 -725 6735 6353 3 1079 222 62 0 0 chr17 64755841 64755873 -30516778 + (TTATA)n Simple_repeat Simple_repeat 4 35 0 3 1079 680 236 36 36 chr17 64755878 64756045 -30516606 - B3A SINE B2 -31 167 1 3 1079 198 0 0 0 chr17 64756117 64756139 -30516512 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1079 1141 157 106 19 chr17 64757908 64758079 -30514572 - URR1A DNA MER1_type 0 226 58 3 1079 198 0 0 0 chr17 64758079 64758101 -30514550 + (TGGGGG)n Simple_repeat Simple_repeat 1 22 0 3 1079 1141 157 106 19 chr17 64758101 64758137 -30514514 - URR1A DNA MER1_type -169 57 1 3 1079 488 333 81 29 chr17 64758409 64758681 -30513970 + LTR40b LTR ERVL 174 459 -3 3 1079 21 0 0 0 chr17 64758701 64758722 -30513929 + AT_rich Low_complexity Low_complexity 1 21 0 3 1079 513 287 42 0 chr17 64758969 64759112 -30513539 + B1F2 SINE Alu 1 149 0 3 1079 847 265 23 18 chr17 64759708 64759927 -30512724 + ID_B1 SINE B4 2 221 -3 3 1079 765 289 91 56 chr17 64760007 64760578 -30512073 + L1MD3 LINE L1 7405 7995 0 3 1079 411 155 107 58 chr17 64761005 64761108 -30511543 + B4A SINE B4 185 292 0 4 1079 516 232 17 0 chr17 64761108 64761285 -30511366 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 1079 546 214 6 23 chr17 64761250 64761422 -30511229 + (CATA)n Simple_repeat Simple_repeat 4 172 0 4 1079 198 224 0 0 chr17 64761433 64761482 -30511169 + (CATA)n Simple_repeat Simple_repeat 4 52 0 4 1079 495 252 170 24 chr17 64761644 64761969 -30510682 + MTD LTR MaLR 1 388 -31 4 1079 806 103 0 0 chr17 64761978 64762094 -30510557 - B1_Mur3 SINE Alu 0 149 34 4 1079 354 23 0 0 chr17 64762107 64762150 -30510501 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1079 1654 245 73 27 chr17 64762510 64762988 -30509663 + RLTR20B1 LTR ERVK 49 548 -15 4 1079 494 209 8 0 chr17 64763620 64763749 -30508902 + CT-rich Low_complexity Low_complexity 1 130 0 4 1079 376 215 42 127 chr17 64764345 64764558 -30508093 + L1MA6 LINE L1 6100 6294 -6 4 1079 317 221 51 31 chr17 64764605 64764703 -30507948 + L1M5 LINE L1 5579 5678 -446 4 1079 23 33 0 0 chr17 64765022 64765052 -30507599 + AT_rich Low_complexity Low_complexity 1 30 0 4 1079 273 315 26 18 chr17 64765232 64765345 -30507306 - Lx8 LINE L1 -1 7472 7359 4 1079 192 77 0 0 chr17 64765361 64765387 -30507264 + (TTA)n Simple_repeat Simple_repeat 2 27 0 4 1079 716 270 21 43 chr17 64765397 64765583 -30507068 - B3A SINE B2 -16 182 1 4 1079 1651 167 160 24 chr17 64765607 64765945 -30506706 + ORR1C2 LTR MaLR 1 384 0 4 1079 1835 189 106 41 chr17 64766923 64767414 -30505237 - Lx9 LINE L1 -1 7643 7121 4 1079 35989 67 2 4 chr17 64767417 64773627 -30499024 - L1Md_F2 LINE L1 0 6585 287 4 1079 597 189 0 19 chr17 64773877 64774079 -30498572 + CT-rich Low_complexity Low_complexity 1 198 0 4 1079 430 281 0 37 chr17 64774943 64775039 -30497612 + ID_B1 SINE B4 117 211 -13 4 1079 423 0 0 0 chr17 64775039 64775086 -30497565 + (GA)n Simple_repeat Simple_repeat 1 47 0 4 1079 912 186 0 0 chr17 64775660 64775805 -30496846 - B1_Mur4 SINE Alu 0 150 6 4 1079 414 0 0 0 chr17 64777081 64777127 -30495524 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 1079 252 0 0 0 chr17 64777127 64777154 -30495497 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 1079 2328 220 55 8 chr17 64777332 64777827 -30494824 + Lx8 LINE L1 6389 6906 -567 4 1079 1175 284 53 29 chr17 64777843 64778217 -30494434 + Lx8 LINE L1 6955 7337 -136 4 1079 25 51 0 0 chr17 64778217 64778256 -30494395 + AT_rich Low_complexity Low_complexity 1 39 0 4 1079 246 246 188 0 chr17 64778441 64778510 -30494141 + BC1_Mm scRNA scRNA 14 95 -57 4 1079 245 371 58 17 chr17 64778535 64778708 -30493943 - L2b LINE L2 -236 3139 2960 4 1079 362 345 0 88 chr17 64778789 64778931 -30493720 + MLT1A LTR MaLR 9 141 -233 4 1079 225 0 0 0 chr17 64778931 64778956 -30493695 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1079 803 180 0 28 chr17 64778956 64779099 -30493552 - B1_Mur3 SINE Alu -10 139 1 4 1079 362 345 0 88 chr17 64779099 64779149 -30493502 + MLT1A LTR MaLR 142 184 -190 4 1079 258 355 63 42 chr17 64780139 64780330 -30492321 - MIRc SINE MIR -63 205 11 4 1079 446 235 62 40 chr17 64781094 64781250 -30491401 + L1MA4 LINE L1 6099 6256 -44 4 1079 207 0 0 0 chr17 64781255 64781278 -30491373 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1079 615 108 0 0 chr17 64781431 64781533 -30491118 - L1Md_F2 LINE L1 -3 6579 6478 4 1079 3900 132 2 2 chr17 64781752 64782342 -30490309 - L1_Mus4 LINE L1 -739 5144 4555 4 1079 7727 104 8 3 chr17 64782337 64783816 -30488835 + L1_Mus4 LINE L1 5152 6636 0 4 1079 296 261 52 35 chr17 64784635 64784750 -30487901 + L1_Mur3 LINE L1 5242 5358 -522 4 1079 3610 128 28 92 chr17 64784864 64785731 -30486920 + RLTR13D4 LTR ERVK 1 1033 0 4 1079 843 256 32 23 chr17 64786164 64786384 -30486267 - ORR1E LTR MaLR -137 222 1 4 1079 757 214 142 83 chr17 64787002 64787242 -30485409 + RMER1C Other Other 1089 1342 0 4 1079 1170 76 21 0 chr17 64787892 64788036 -30484615 - B1_Mus1 SINE Alu 0 148 2 4 1079 1406 159 115 21 chr17 64788241 64788572 -30484079 - ORR1A4 LTR MaLR 0 384 1 4 1079 805 271 139 21 chr17 64789237 64789569 -30483082 + L1MEg2 LINE L1 4 374 -6078 4 1079 455 351 147 0 chr17 64789633 64789884 -30482767 + L1MEg2 LINE L1 568 855 -5597 4 1079 434 331 21 52 chr17 64789917 64790108 -30482543 - MLT1A LTR MaLR -15 375 191 4 1079 501 155 70 30 chr17 64790470 64790570 -30482081 + B1_Mur2 SINE Alu 45 148 -1 4 1079 812 121 0 8 chr17 64790581 64790714 -30481937 + (GGGA)n Simple_repeat Simple_repeat 2 133 0 4 1079 315 49 0 0 chr17 64790967 64791008 -30481643 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1079 213 39 0 0 chr17 64791008 64791033 -30481618 + (GA)n Simple_repeat Simple_repeat 2 27 0 4 1079 639 131 383 7 chr17 64791884 64792038 -30480613 + B3 SINE B2 1 212 -4 4 1079 237 280 57 57 chr17 64792122 64792281 -30480370 + L1MEg2 LINE L1 5104 5262 -2192 4 1079 646 285 49 49 chr17 64792396 64792643 -30480008 + MTE2a LTR MaLR 133 379 0 4 1079 1126 302 36 11 chr17 64792923 64793270 -30479381 - MLT1A0 LTR MaLR -5 403 8 4 1079 21 57 0 0 chr17 64793351 64793386 -30479265 + AT_rich Low_complexity Low_complexity 1 35 0 4 1079 604 310 118 34 chr17 64793528 64794087 -30478564 + L1MA5A LINE L1 5429 6056 -244 4 1079 241 241 124 9 chr17 64794190 64794303 -30478348 + L1MA6 LINE L1 5953 6078 -222 4 1079 636 262 52 21 chr17 64794489 64794680 -30477971 - MER2 DNA MER2_type -54 291 95 4 1079 2060 169 21 19 chr17 64795528 64795903 -30476748 + ORR1C1 LTR MaLR 1 376 -2 4 1079 312 253 44 0 chr17 64796206 64796297 -30476354 - MLT1N2 LTR MaLR -26 536 442 4 1079 2359 37 22 0 chr17 64796298 64796566 -30476085 + L1_Mus1 LINE L1 6294 6567 0 4 1079 207 0 0 0 chr17 64796593 64796616 -30476035 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 1079 646 128 8 8 chr17 64796771 64796889 -30475762 + (TG)n Simple_repeat Simple_repeat 2 119 0 4 1079 547 334 101 52 chr17 64796907 64797235 -30475416 - MLT2B1 LTR ERVL -51 469 126 4 1079 3601 282 76 44 chr17 64799188 64800969 -30471682 + Lx8 LINE L1 4342 6186 -1510 4 1079 4642 124 64 23 chr17 64800969 64801677 -30470974 + RMER19A LTR ERVK 1 737 0 4 1079 844 306 95 102 chr17 64801677 64801732 -30470919 + Lx8 LINE L1 6187 6236 -1460 4 1079 491 178 0 8 chr17 64801757 64801847 -30470804 + GA-rich Low_complexity Low_complexity 4 92 0 4 1079 1284 89 0 0 chr17 64801847 64802027 -30470624 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 1079 491 178 0 8 chr17 64802027 64802055 -30470596 + polypurine Low_complexity Low_complexity 93 120 0 4 1079 1138 97 6 6 chr17 64802060 64802236 -30470415 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 4 1079 546 57 0 0 chr17 64802236 64802305 -30470346 + (GGAA)n Simple_repeat Simple_repeat 4 73 0 4 1079 1474 233 143 6 chr17 64802365 64802728 -30469923 + MTD LTR MaLR 1 399 -20 4 1079 1751 313 73 18 chr17 64802774 64803812 -30468839 + Lx8 LINE L1 6360 7468 -5 4 1079 284 291 117 25 chr17 64804801 64804921 -30467730 + B1F SINE Alu 18 148 -1 4 1079 277 133 50 0 chr17 64806073 64806133 -30466518 + CT-rich Low_complexity Low_complexity 6 68 0 4 1079 668 273 12 36 chr17 64806428 64806595 -30466056 + RSINE1 SINE B4 3 165 0 4 1079 356 257 96 28 chr17 64806885 64807029 -30465622 + MIRb SINE MIR 3 174 -94 4 1079 702 113 0 0 chr17 64807376 64807509 -30465142 + (TG)n Simple_repeat Simple_repeat 2 134 0 4 1079 32381 74 39 5 chr17 64807830 64812723 -30459928 + L1Md_F LINE L1 523 5587 -296 4 1079 7766 79 14 23 chr17 64812723 64813725 -30458926 + L1Md_F2 LINE L1 5588 6580 -2 4 1079 32381 68 31 5 chr17 64813725 64813739 -30458912 + L1Md_F LINE L1 5588 5601 -282 4 1079 327 25 0 0 chr17 64813909 64813949 -30458702 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 4 1079 1176 300 76 83 chr17 64814473 64815172 -30457479 + Lx9 LINE L1 6777 7470 -174 4 1079 211 387 51 51 chr17 64816692 64816869 -30455782 + MIRb SINE MIR 63 239 -29 4 1079 198 118 0 0 chr17 64816995 64817029 -30455622 + (C)n Simple_repeat Simple_repeat 1 34 0 4 1079 276 30 0 0 chr17 64817320 64817353 -30455298 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 1079 189 236 17 83 chr17 64818148 64818208 -30454443 - MIR SINE MIR -86 122 67 4 1079 593 303 64 64 chr17 64819213 64819619 -30453032 + L1MEg LINE L1 680 1085 -5548 4 1079 709 275 70 63 chr17 64819758 64820045 -30452606 + B4 SINE B4 4 292 0 4 1079 522 191 0 0 chr17 64820050 64820181 -30452470 + (CA)n Simple_repeat Simple_repeat 2 132 0 4 1079 1114 72 116 35 chr17 64820191 64820253 -30452398 + B2_Mm2 SINE B2 2 80 -115 4 1079 3323 52 34 3 chr17 64820253 64820637 -30452014 - MTA_Mm LTR MaLR 0 396 1 4 1079 1114 72 116 35 chr17 64820637 64820747 -30451904 + B2_Mm2 SINE B2 81 188 -7 4 1079 314 275 91 32 chr17 64820758 64820912 -30451739 + L1ME1 LINE L1 5110 5272 -874 4 1079 1292 236 57 53 chr17 64820913 64821231 -30451420 + ORR1E LTR MaLR 1 319 -40 4 1079 341 136 0 15 chr17 64821249 64821316 -30451335 + (CA)n Simple_repeat Simple_repeat 2 67 0 4 1079 341 253 25 0 chr17 64821599 64821678 -30450973 - ID4_ SINE ID 0 83 3 4 1079 318 315 131 30 chr17 64821816 64822202 -30450449 + L1ME1 LINE L1 5654 6088 -91 4 1079 455 288 69 39 chr17 64822713 64822973 -30449678 + L1MEg LINE L1 2320 2587 -4046 4 1079 570 230 157 6 chr17 64822978 64823144 -30449507 + ORR1D1 LTR MaLR 184 374 0 4 1079 914 297 107 82 chr17 64823146 64823564 -30449087 + L1MEg LINE L1 4529 4976 -1561 4 1079 290 26 26 0 chr17 64823564 64823603 -30449048 + (TA)n Simple_repeat Simple_repeat 1 40 0 4 1079 914 297 107 82 chr17 64823603 64823790 -30448861 + L1MEg LINE L1 4977 5166 -1371 4 1079 1228 62 7 0 chr17 64823790 64823934 -30448717 + B1_Mm SINE Alu 1 145 -2 4 1079 914 298 106 72 chr17 64823934 64824639 -30448012 + L1MEg LINE L1 5167 5882 -868 4 1079 1562 68 16 0 chr17 64824697 64824888 -30447763 - B2_Mm2 SINE B2 -1 194 1 4 1079 339 294 234 12 chr17 64824900 64825148 -30447503 + L1MEg LINE L1 1192 1494 -4748 4 1079 486 0 0 0 chr17 64825373 64825427 -30447224 + (TA)n Simple_repeat Simple_repeat 1 54 0 4 1079 1944 193 113 43 chr17 64825452 64825922 -30446729 - RLTR16 LTR ERVK -2 503 1 4 1079 500 200 0 9 chr17 64825971 64826077 -30446574 + B1_Mur2 SINE Alu 45 149 0 4 1079 668 92 8 25 chr17 64826725 64826847 -30445804 + (GGAA)n Simple_repeat Simple_repeat 2 121 0 4 1079 661 292 15 44 chr17 64827168 64827372 -30445279 + Tigger5 DNA MER2_type 7 204 -2202 4 1079 754 342 28 25 chr17 64827614 64827977 -30444674 - MLT2B4 LTR ERVL -188 368 5 5 1079 987 315 112 52 chr17 64827998 64828911 -30443740 + L1MEg LINE L1 3486 4453 -1693 4 1079 216 0 0 0 chr17 64828929 64828953 -30443698 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 1079 212 51 103 0 chr17 64829093 64829132 -30443519 - B3 SINE B2 -173 43 1 5 1079 410 171 0 22 chr17 64829322 64829412 -30443239 + (TATATG)n Simple_repeat Simple_repeat 2 89 0 5 1079 669 247 46 21 chr17 64829611 64829805 -30442846 - L1M2 LINE L1 -2189 3954 3756 5 1079 848 256 97 28 chr17 64829881 64830202 -30442449 - MTD LTR MaLR -38 358 1 5 1079 652 264 68 64 chr17 64830205 64830456 -30442195 + B4 SINE B4 40 291 -1 5 1079 459 0 0 0 chr17 64830458 64830509 -30442142 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1079 421 220 5 30 chr17 64830828 64830948 -30441703 - B2_Mm2 SINE B2 -102 114 6 5 1079 879 183 217 0 chr17 64830952 64831127 -30441524 - B3 SINE B2 0 216 4 5 1079 738 256 117 5 chr17 64832743 64832939 -30439712 + ID_B1 SINE B4 7 224 0 5 1079 186 71 0 0 chr17 64834172 64834200 -30438451 + (CAGA)n Simple_repeat Simple_repeat 3 30 0 5 1079 742 223 206 31 chr17 64834283 64834464 -30438187 + Lx8 LINE L1 7127 7331 -142 5 1079 366 23 0 0 chr17 64834464 64834507 -30438144 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 1079 742 223 206 31 chr17 64834507 64834616 -30438035 + Lx8 LINE L1 7332 7467 -6 5 1079 559 292 64 67 chr17 64835053 64835499 -30437152 - MLT1B LTR MaLR 0 467 1 5 1079 1097 268 123 23 chr17 64836552 64837071 -30435580 - L1MA8 LINE L1 -23 6268 5698 5 1079 1138 88 0 0 chr17 64837205 64837352 -30435299 - B1_Mus2 SINE Alu 0 147 1 5 1079 259 293 24 12 chr17 64838757 64838840 -30433811 - B4A SINE B4 -208 84 1 5 1079 813 191 0 20 chr17 64839207 64839357 -30433294 + B1_Mus1 SINE Alu 2 148 0 5 1079 21 0 0 0 chr17 64839963 64839984 -30432667 + AT_rich Low_complexity Low_complexity 1 21 0 5 1079 212 304 53 60 chr17 64840308 64840441 -30432210 - MIR SINE MIR -102 160 29 5 1079 189 0 0 0 chr17 64840468 64840489 -30432162 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1079 3516 36 0 0 chr17 64840725 64841136 -30431515 + L1Md_F2 LINE L1 6172 6582 0 5 1079 189 107 0 0 chr17 64841157 64841185 -30431466 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 5 1079 3261 138 25 97 chr17 64841448 64842140 -30430511 - RLTR26 LTR ERVK 0 642 1 5 1079 251 54 0 26 chr17 64842277 64842315 -30430336 + (GGGAGA)n Simple_repeat Simple_repeat 1 37 0 5 1079 628 188 351 112 chr17 64842354 64842645 -30430006 + ORR1D2 LTR MaLR 3 363 -7 5 1079 186 71 0 0 chr17 64842887 64842915 -30429736 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1079 293 68 0 22 chr17 64842934 64842979 -30429672 + (GGA)n Simple_repeat Simple_repeat 2 45 0 5 1079 782 128 13 13 chr17 64844325 64844476 -30428175 + GA-rich Low_complexity Low_complexity 3 153 0 5 1079 1150 219 70 82 chr17 64844528 64844857 -30427794 + ORR1D2 LTR MaLR 41 365 -5 5 1079 432 326 23 0 chr17 64845255 64845387 -30427264 - LTR86B1 LTR ERVL -358 135 1 5 1079 26 0 0 0 chr17 64846392 64846418 -30426233 + AT_rich Low_complexity Low_complexity 1 26 0 5 1079 531 161 6 53 chr17 64846943 64847113 -30425538 + CT-rich Low_complexity Low_complexity 2 163 0 5 1079 850 92 28 17 chr17 64847122 64847299 -30425352 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 5 1079 266 247 39 0 chr17 64847304 64847381 -30425270 + CT-rich Low_complexity Low_complexity 1 80 0 5 1079 22 35 0 0 chr17 64848133 64848162 -30424489 + AT_rich Low_complexity Low_complexity 1 29 0 5 1079 396 0 0 0 chr17 64848487 64848531 -30424120 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 1079 210 37 0 0 chr17 64849878 64849905 -30422746 + (TAA)n Simple_repeat Simple_repeat 2 28 0 5 1079 367 130 76 53 chr17 64849992 64850204 -30422447 + (TATAA)n Simple_repeat Simple_repeat 1 216 0 5 1079 467 323 5 45 chr17 64851082 64851283 -30421368 - ERVL-E-int LTR ERVL -3261 2496 2220 5 1079 274 296 30 10 chr17 64851832 64851931 -30420720 - ERVL-E-int LTR ERVL -4147 1520 1420 5 1079 772 267 162 25 chr17 64852544 64852828 -30419823 - ERVL-E-int LTR ERVL -5034 633 311 5 1079 583 347 106 28 chr17 64853137 64853570 -30419081 - LTR33B LTR ERVL -34 469 3 5 1079 374 100 17 0 chr17 64853819 64853879 -30418772 + (AGGGGG)n Simple_repeat Simple_repeat 2 62 0 5 1079 899 314 127 12 chr17 64854040 64854624 -30418027 + Charlie1a DNA MER1_type 1 651 -804 5 1079 195 129 0 0 chr17 64855344 64855375 -30417276 + (T)n Simple_repeat Simple_repeat 1 31 0 5 1079 188 135 27 0 chr17 64855401 64855438 -30417213 + CT-rich Low_complexity Low_complexity 3 40 0 5 1079 343 286 98 46 chr17 64855440 64855632 -30417019 - B3A SINE B2 -11 205 2 5 1079 2775 78 70 0 chr17 64855632 64856018 -30416633 - Lx LINE L1 -126 6528 6116 5 1079 678 44 0 0 chr17 64856754 64856844 -30415807 + (TG)n Simple_repeat Simple_repeat 2 91 0 5 1079 340 300 38 8 chr17 64856845 64856976 -30415675 - RSINE1 SINE B4 -28 137 3 5 1079 492 59 0 0 chr17 64858297 64858365 -30414286 + (TCTA)n Simple_repeat Simple_repeat 1 68 0 5 1079 213 230 0 0 chr17 64858391 64858491 -30414160 + (TA)n Simple_repeat Simple_repeat 1 100 0 5 1079 677 266 84 28 chr17 64859486 64859699 -30412952 - Lx8 LINE L1 -138 7335 7111 5 1079 1125 163 78 60 chr17 64859706 64859974 -30412677 + Lx4B LINE L1 6782 7054 -4 5 1079 22 0 0 0 chr17 64859977 64859999 -30412652 + AT_rich Low_complexity Low_complexity 1 22 0 5 1079 399 276 9 62 chr17 64861321 64861433 -30411218 + PB1D7 SINE Alu 6 111 -9 5 1079 570 250 144 32 chr17 64863953 64864234 -30408417 + MER57D LTR ERV1 78 394 -17 5 1079 669 134 0 0 chr17 64865009 64865121 -30407530 + (TTTTC)n Simple_repeat Simple_repeat 2 113 0 5 1079 1096 96 0 0 chr17 64865121 64865267 -30407384 - B1_Mus2 SINE Alu 0 147 2 5 1079 199 306 134 47 chr17 64865282 64865409 -30407242 + L4 LINE RTE 364 501 -1528 5 1079 1008 107 18 6 chr17 64865705 64865875 -30406776 + (GAAA)n Simple_repeat Simple_repeat 4 175 0 5 1079 456 19 0 0 chr17 64865887 64865940 -30406711 + (GGAAA)n Simple_repeat Simple_repeat 2 54 0 5 1079 619 156 8 8 chr17 64866163 64866286 -30406365 + CT-rich Low_complexity Low_complexity 2 124 0 5 1079 405 0 0 0 chr17 64867197 64867242 -30405409 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1079 496 307 116 79 chr17 64867408 64868105 -30404546 + L1MEc LINE L1 210 932 -5468 5 1079 200 216 40 7 chr17 64868286 64868435 -30404216 + (TA)n Simple_repeat Simple_repeat 2 155 0 5 1079 30 0 0 0 chr17 64868441 64868471 -30404180 + AT_rich Low_complexity Low_complexity 1 30 0 5 1079 308 139 75 6 chr17 64868471 64868630 -30404021 + (TA)n Simple_repeat Simple_repeat 1 170 0 5 1079 359 226 24 35 chr17 64868645 64868815 -30403836 + (TTATA)n Simple_repeat Simple_repeat 2 169 0 5 1079 233 294 59 0 chr17 64868831 64868916 -30403735 + L1MEc LINE L1 115 204 -6196 5 1079 404 298 152 43 chr17 64868945 64869739 -30402912 + L1MEc LINE L1 1095 2020 -4380 5 1079 275 289 31 10 chr17 64869787 64869885 -30402766 + MLT1A LTR MaLR 46 145 -229 5 1079 264 250 167 16 chr17 64870037 64870163 -30402488 + RMER10A LTR ERVL 285 429 -13 5 1079 937 286 50 36 chr17 64870179 64870473 -30402178 - L1MA4 LINE L1 -376 5924 5625 5 1079 288 0 0 0 chr17 64870473 64870505 -30402146 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1079 937 286 50 36 chr17 64870505 64870594 -30402057 - L1MA4 LINE L1 -676 5624 5536 5 1079 209 176 0 0 chr17 64870665 64870699 -30401952 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1079 356 288 25 25 chr17 64870812 64870972 -30401679 + MLT1A0 LTR MaLR 1 160 -205 5 1079 180 200 0 0 chr17 64871600 64871640 -30401011 + CT-rich Low_complexity Low_complexity 2 41 0 5 1079 466 303 72 26 chr17 64871664 64871857 -30400794 - B3 SINE B2 0 216 15 5 1079 662 226 7 14 chr17 64872340 64872488 -30400163 - B1_Mus1 SINE Alu -1 147 1 5 1079 938 106 7 0 chr17 64873241 64873383 -30399268 + B1_Mus2 SINE Alu 5 147 0 5 1079 412 277 22 30 chr17 64873481 64873615 -30399036 - RSINE1 SINE B4 -29 136 4 5 1079 319 265 118 0 chr17 64874083 64874185 -30398466 + MLT1A0 LTR MaLR 252 365 0 5 1079 234 0 0 0 chr17 64874464 64874490 -30398161 + (ATTG)n Simple_repeat Simple_repeat 4 29 0 5 1079 966 42 0 0 chr17 64874644 64874763 -30397888 + (GA)n Simple_repeat Simple_repeat 1 119 0 5 1079 259 301 70 40 chr17 64874817 64875018 -30397633 + L1M4 LINE L1 2723 2929 -3217 5 1079 481 265 17 56 chr17 64875358 64875538 -30397113 + L1ME1 LINE L1 6007 6179 0 5 1079 245 318 26 111 chr17 64876288 64876422 -30396229 - MIR SINE MIR -36 226 93 5 1079 5900 56 4 1 chr17 64876422 64877142 -30395509 + L1_Mus1 LINE L1 5832 6553 -14 5 1079 252 0 0 0 chr17 64877145 64877173 -30395478 + (TAA)n Simple_repeat Simple_repeat 1 28 0 5 1079 245 318 26 111 chr17 64877173 64877260 -30395391 - MIR SINE MIR -170 92 20 5 1079 842 192 74 25 chr17 64879039 64879242 -30393409 + B3 SINE B2 4 216 0 5 1079 203 321 74 0 chr17 64880302 64880383 -30392268 + L2a LINE L2 3321 3407 -19 5 1080 583 260 83 17 chr17 64881020 64881200 -30391451 + ORR1E LTR MaLR 1 192 -167 5 1080 299 287 0 38 chr17 64881208 64881313 -30391338 + CT-rich Low_complexity Low_complexity 5 105 0 5 1080 386 328 28 44 chr17 64881313 64881495 -30391156 + ORR1E LTR MaLR 179 357 -2 5 1080 790 243 181 31 chr17 64882265 64882618 -30390033 - Lx9 LINE L1 -3 7641 7236 5 1080 242 229 46 5 chr17 64882702 64882816 -30389835 - L2a LINE L2 -286 3140 3021 5 1080 899 175 197 12 chr17 64883056 64883305 -30389346 + RMER6B LTR ERVK 167 461 0 5 1080 1333 172 63 66 chr17 64883804 64884152 -30388499 + RLTR11A2 LTR ERVK 1 347 -180 5 1080 2460 98 3 0 chr17 64885462 64885788 -30386863 + ORR1A2 LTR MaLR 1 327 0 5 1080 5128 88 12 16 chr17 64885804 64886532 -30386119 - Lx LINE L1 0 6654 5930 5 1080 504 32 0 0 chr17 64886991 64887053 -30385598 + (CCCTG)n Simple_repeat Simple_repeat 3 64 0 5 1080 1166 223 63 32 chr17 64888916 64889231 -30383420 + MT2A LTR ERVL 1 325 -208 5 1080 896 156 77 22 chr17 64890356 64890517 -30382134 + B2_Mm2 SINE B2 1 159 -36 6 1080 261 0 0 0 chr17 64890517 64890546 -30382105 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 6 1080 896 156 77 22 chr17 64890546 64890567 -30382084 + B2_Mm2 SINE B2 160 192 -3 6 1080 28 48 0 0 chr17 64890708 64890750 -30381901 + AT_rich Low_complexity Low_complexity 1 42 0 6 1080 1055 104 0 0 chr17 64890824 64890968 -30381683 + B1_Mus1 SINE Alu 2 145 -3 6 1080 252 0 0 0 chr17 64890968 64890996 -30381655 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 6 1080 626 268 36 96 chr17 64891509 64891872 -30380779 + L1MC1 LINE L1 5970 6310 -23 6 1080 243 0 0 0 chr17 64893982 64894009 -30378642 + (TA)n Simple_repeat Simple_repeat 2 28 0 6 1080 279 0 0 0 chr17 64894009 64894040 -30378611 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 1080 861 181 0 0 chr17 64894040 64894217 -30378434 + (TA)n Simple_repeat Simple_repeat 2 178 0 6 1080 908 119 11 38 chr17 64894464 64894647 -30378004 + GA-rich Low_complexity Low_complexity 3 180 0 6 1080 273 260 0 0 chr17 64898682 64898786 -30373865 + (TG)n Simple_repeat Simple_repeat 2 105 0 6 1080 264 120 0 0 chr17 64898826 64898876 -30373775 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 1080 198 0 0 0 chr17 64898876 64898898 -30373753 + (TG)n Simple_repeat Simple_repeat 1 22 0 6 1080 38 39 0 0 chr17 64900024 64900076 -30372575 + AT_rich Low_complexity Low_complexity 1 52 0 6 1080 27 49 0 0 chr17 64900198 64900239 -30372412 + AT_rich Low_complexity Low_complexity 1 41 0 6 1080 1908 130 27 36 chr17 64901586 64902000 -30370651 + RMER17C LTR ERVK 1 410 0 6 1080 276 149 0 0 chr17 64903520 64903567 -30369084 + (CATA)n Simple_repeat Simple_repeat 2 48 0 6 1080 305 167 0 0 chr17 64903567 64903621 -30369030 + HAL1-3A_ME LINE L1 1975 2028 -830 6 1080 22 0 0 0 chr17 64903684 64903706 -30368945 + AT_rich Low_complexity Low_complexity 1 22 0 6 1080 257 366 36 0 chr17 64906270 64906382 -30366269 + MIRb SINE MIR 83 198 -70 6 1080 247 316 13 0 chr17 64906845 64906921 -30365730 + G-rich Low_complexity Low_complexity 6 82 0 6 1080 288 0 0 0 chr17 64908212 64908244 -30364407 + (TC)n Simple_repeat Simple_repeat 1 32 0 6 1080 286 273 13 13 chr17 64908480 64908558 -30364093 + CT-rich Low_complexity Low_complexity 2 79 0 6 1080 21 0 0 0 chr17 64908894 64908915 -30363736 + GC_rich Low_complexity Low_complexity 1 21 0 6 1080 1014 73 0 0 chr17 64909644 64909780 -30362871 + (TTC)n Simple_repeat Simple_repeat 2 137 0 6 1080 28 48 0 0 chr17 64911235 64911277 -30361374 + AT_rich Low_complexity Low_complexity 1 42 0 6 1080 843 172 198 45 chr17 64911289 64911466 -30361185 + B3 SINE B2 3 206 -10 6 1080 23 33 0 0 chr17 64911487 64911517 -30361134 + AT_rich Low_complexity Low_complexity 1 30 0 6 1080 406 222 9 53 chr17 64913962 64914076 -30358575 + B1F2 SINE Alu 1 109 -40 6 1080 473 286 123 19 chr17 64914076 64914336 -30358315 + B4A SINE B4 1 287 -5 6 1080 219 219 0 0 chr17 64914342 64914383 -30358268 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1080 678 155 18 0 chr17 64914400 64914568 -30358083 + (CA)n Simple_repeat Simple_repeat 2 172 0 6 1080 844 143 227 16 chr17 64915062 64915247 -30357404 + URR1B DNA MER1_type 2 225 0 6 1080 369 0 0 0 chr17 64916018 64916059 -30356592 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1080 323 329 128 92 chr17 64916465 64916746 -30355905 + B4 SINE B4 2 292 0 6 1080 351 192 0 0 chr17 64916746 64916824 -30355827 + (CA)n Simple_repeat Simple_repeat 1 78 0 6 1080 480 111 0 0 chr17 64917550 64917622 -30355029 + (CA)n Simple_repeat Simple_repeat 2 73 0 6 1080 1081 167 5 10 chr17 64917653 64917847 -30354804 + ORR1C2 LTR MaLR 192 384 0 6 1080 3686 225 95 65 chr17 64917847 64918377 -30354274 - Lx9 LINE L1 -456 7188 6625 6 1080 1091 89 7 0 chr17 64918377 64918523 -30354128 + B1_Mus1 SINE Alu 2 148 0 6 1080 3686 225 95 65 chr17 64918523 64919106 -30353545 - Lx9 LINE L1 -1020 6624 6042 6 1080 250 238 0 87 chr17 64919120 64919178 -30353473 - B4 SINE B4 -208 84 33 6 1080 4147 161 75 63 chr17 64919178 64920069 -30352582 + RMER19B LTR ERVK 1 902 0 6 1080 250 238 0 87 chr17 64920069 64920102 -30352549 - B4 SINE B4 -260 32 1 6 1080 580 332 42 50 chr17 64920436 64920545 -30352106 - L1MC4 LINE L1 -1186 6856 6745 6 1080 2013 185 3 44 chr17 64920545 64920764 -30351887 - ORR1D1 LTR MaLR 0 374 166 6 1080 630 60 0 0 chr17 64920764 64920847 -30351804 + (GA)n Simple_repeat Simple_repeat 2 84 0 6 1080 2013 185 3 44 chr17 64920847 64921017 -30351634 - ORR1D1 LTR MaLR -209 165 1 6 1080 580 332 42 50 chr17 64921017 64921309 -30351342 - L1MC4 LINE L1 -1298 6744 6458 6 1080 537 283 82 85 chr17 64921765 64922027 -30350624 - MLT1B LTR MaLR -20 370 119 6 1080 210 37 0 0 chr17 64922027 64922054 -30350597 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1080 537 283 82 85 chr17 64922054 64922143 -30350508 - MLT1B LTR MaLR -272 118 20 6 1080 480 48 0 0 chr17 64922174 64922237 -30350414 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 1080 480 35 0 0 chr17 64922657 64922715 -30349936 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 1080 342 215 0 0 chr17 64924211 64924290 -30348361 + (TA)n Simple_repeat Simple_repeat 2 80 0 6 1080 450 245 9 47 chr17 64924790 64924897 -30347754 + ID_B1 SINE B4 84 186 -38 6 1080 372 271 31 39 chr17 64924897 64924916 -30347735 + B1_Mus2 SINE Alu 3 127 -20 6 1080 460 278 12 41 chr17 64925027 64925196 -30347455 - RSINE1 SINE B4 0 165 2 6 1080 1057 209 10 10 chr17 64925522 64925730 -30346921 - B3 SINE B2 -7 209 2 6 1080 2578 191 27 2 chr17 64925734 64926253 -30346398 - RMER5 LTR ERV1 -2 532 1 6 1080 1107 131 30 25 chr17 64926265 64926468 -30346183 - ORR1B2 LTR MaLR -91 276 73 6 1080 229 51 51 0 chr17 64928192 64928231 -30344420 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 6 1080 190 0 67 0 chr17 64929989 64930019 -30342632 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 1080 972 166 105 17 chr17 64930019 64930360 -30342291 - RMER17C LTR ERVK -8 402 2 6 1080 357 186 0 0 chr17 64931803 64931873 -30340778 + GA-rich Low_complexity Low_complexity 3 72 0 6 1080 251 278 0 14 chr17 64932421 64932494 -30340157 - RMER5 LTR ERV1 -12 522 451 6 1080 609 274 97 22 chr17 64932491 64932760 -30339891 - RMER5 LTR ERV1 -220 314 26 6 1080 254 123 0 17 chr17 64932857 64932915 -30339736 + (TTTG)n Simple_repeat Simple_repeat 1 57 0 6 1080 1176 68 0 0 chr17 64932919 64933066 -30339585 - B1_Mm SINE Alu 0 147 1 6 1080 225 132 0 0 chr17 64933921 64933959 -30338692 + (GGAA)n Simple_repeat Simple_repeat 2 39 0 6 1080 858 280 42 87 chr17 64935427 64935559 -30337092 + MTEa LTR MaLR 8 138 -241 6 1080 492 18 0 0 chr17 64935559 64935616 -30337035 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 1080 357 24 0 0 chr17 64935616 64935657 -30336994 + (GA)n Simple_repeat Simple_repeat 1 42 0 6 1080 858 280 42 87 chr17 64935657 64935902 -30336749 + MTEa LTR MaLR 139 368 -11 6 1080 2337 254 81 52 chr17 64935992 64936832 -30335819 + RCHARR1 DNA MER1_type 37 900 -74 6 1080 1062 200 22 22 chr17 64936833 64937109 -30335542 + BGLII_B LTR ERVK 2 277 -164 6 1080 247 130 18 18 chr17 64937109 64937164 -30335487 + GA-rich Low_complexity Low_complexity 1 55 0 6 1080 898 226 39 25 chr17 64937164 64937189 -30335462 + BGLII_B LTR ERVK 156 180 -261 6 1080 1085 96 11 11 chr17 64937189 64937369 -30335282 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 6 1080 898 226 39 25 chr17 64937369 64937387 -30335264 + BGLII_B LTR ERVK 181 195 -246 6 1080 1289 67 0 16 chr17 64937387 64937569 -30335082 + (GGAGA)n Simple_repeat Simple_repeat 2 180 0 6 1080 898 226 39 25 chr17 64937569 64937806 -30334845 + BGLII_B LTR ERVK 196 441 0 6 1080 332 212 0 36 chr17 64937808 64937891 -30334760 + RCHARR1 DNA MER1_type 895 974 0 6 1080 654 247 0 0 chr17 64938055 64938233 -30334418 + (TA)n Simple_repeat Simple_repeat 1 178 0 6 1080 230 294 43 67 chr17 64941845 64942053 -30330598 - L1ME3B LINE L1 -123 6117 5915 6 1080 252 0 0 0 chr17 64942062 64942090 -30330561 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 1080 299 25 0 24 chr17 64942620 64942661 -30329990 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 6 1080 791 109 0 16 chr17 64943311 64943432 -30329219 - B1_Mus2 SINE Alu -1 146 28 6 1080 917 184 93 44 chr17 64943789 64943994 -30328657 - B3 SINE B2 0 216 2 6 1080 217 282 175 25 chr17 64944110 64944230 -30328421 - L2a LINE L2 0 3426 3289 6 1080 231 250 16 0 chr17 64944457 64944521 -30328130 - LTR40c LTR ERVL -52 410 346 6 1080 334 338 55 24 chr17 64944641 64944805 -30327846 - LTR40c LTR ERVL -226 239 71 6 1080 252 100 50 0 chr17 64944951 64944991 -30327660 + L1M2 LINE L1 5436 5477 -823 6 1080 369 316 96 56 chr17 64945102 64945353 -30327298 - B4 SINE B4 -29 263 3 6 1080 282 204 0 0 chr17 64945516 64945609 -30327042 + (CA)n Simple_repeat Simple_repeat 2 94 0 6 1080 861 224 51 128 chr17 64945612 64946027 -30326624 - L1M2 LINE L1 -642 5649 5267 6 1080 302 289 12 0 chr17 64946089 64946172 -30326479 - MLT1B LTR MaLR -38 352 269 6 1080 1146 81 0 0 chr17 64946204 64946352 -30326299 + B1_Mus1 SINE Alu 1 148 0 6 1080 225 0 0 0 chr17 64946352 64946377 -30326274 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1080 325 310 124 0 chr17 64946584 64946713 -30325938 - ERVL-int LTR ERVL -3895 1862 1718 6 1080 665 263 69 20 chr17 64947224 64947426 -30325225 - B3 SINE B2 -3 213 2 6 1080 1149 55 21 0 chr17 64947775 64947920 -30324731 - B1_Mus1 SINE Alu 0 148 1 6 1080 572 239 72 93 chr17 64947928 64948071 -30324580 - B3 SINE B2 -25 191 51 6 1080 1105 189 37 5 chr17 64948071 64948289 -30324362 - URR1B DNA MER1_type 0 225 1 6 1080 572 239 72 93 chr17 64948289 64948339 -30324312 - B3 SINE B2 -166 50 2 6 1080 261 0 0 0 chr17 64948560 64948589 -30324062 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1080 483 317 65 38 chr17 64949009 64949271 -30323380 - LTR41 LTR ERVL -46 722 454 6 1080 650 254 57 17 chr17 64949394 64949570 -30323081 - LTR41 LTR ERVL -585 183 1 6 1080 215 61 30 0 chr17 64950097 64950130 -30322521 + (CCG)n Simple_repeat Simple_repeat 1 34 0 6 1080 441 0 0 0 chr17 64952795 64952844 -30319807 + (GA)n Simple_repeat Simple_repeat 1 49 0 6 1080 212 139 0 44 chr17 64953802 64953847 -30318804 + C-rich Low_complexity Low_complexity 5 47 0 6 1080 258 215 44 132 chr17 64954507 64954598 -30318053 + B1F SINE Alu 35 117 0 6 1080 360 331 21 59 chr17 64955918 64956104 -30316547 - MER20 DNA MER1_type -1 218 40 6 1080 23 0 0 0 chr17 64957267 64957290 -30315361 + AT_rich Low_complexity Low_complexity 1 23 0 6 1080 314 254 28 0 chr17 64957320 64957391 -30315260 - ID4 SINE ID -10 73 1 7 1080 411 235 79 50 chr17 64957421 64957560 -30315091 - B1F1 SINE Alu -2 147 5 7 1080 987 9 0 0 chr17 64958108 64958220 -30314431 + (TTTCC)n Simple_repeat Simple_repeat 4 115 0 7 1080 610 244 190 0 chr17 64958863 64959084 -30313567 + L1MA8 LINE L1 6018 6280 -11 7 1080 222 37 0 0 chr17 64959625 64959652 -30312999 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 7 1080 390 253 273 42 chr17 64959986 64960250 -30312401 + Lx9 LINE L1 6970 7294 -350 7 1080 299 158 35 0 chr17 64961105 64961162 -30311489 + B1_Mus2 SINE Alu 1 59 -88 7 1080 210 98 67 89 chr17 64961198 64961288 -30311363 + (CAGAGA)n Simple_repeat Simple_repeat 5 92 0 7 1080 436 171 27 54 chr17 64961288 64961387 -30311264 + B1_Mur4 SINE Alu 43 140 -10 7 1080 315 0 0 0 chr17 64961387 64961422 -30311229 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1080 436 171 27 54 chr17 64961422 64961433 -30311218 + B1_Mur4 SINE Alu 141 149 -1 7 1080 342 0 0 0 chr17 64962702 64962740 -30309911 + (TG)n Simple_repeat Simple_repeat 1 38 0 7 1080 355 252 176 30 chr17 64962740 64962871 -30309780 - B3A SINE B2 -47 151 2 7 1080 604 261 0 0 chr17 64963637 64963771 -30308880 + RSINE1 SINE B4 15 148 -17 7 1080 674 281 9 38 chr17 64965551 64965762 -30306889 - B3 SINE B2 -2 214 10 7 1080 327 326 159 34 chr17 64966599 64966957 -30305694 - MLT1D LTR MaLR -79 426 24 7 1080 300 323 68 25 chr17 64966958 64967120 -30305531 - MIR SINE MIR -38 224 56 7 1080 310 275 192 0 chr17 64967497 64967617 -30305034 - B3A SINE B2 -55 143 1 7 1080 855 216 36 26 chr17 64968090 64968285 -30304366 - B3A SINE B2 0 198 2 7 1080 450 289 118 18 chr17 64969836 64970065 -30302586 - MLT2B5 LTR ERVL -364 353 102 7 1080 637 222 26 7 chr17 64970238 64970392 -30302259 + B3 SINE B2 54 210 -6 7 1080 764 309 122 41 chr17 64970938 64971404 -30301247 - Tigger10 DNA Tigger -172 1671 1168 7 1080 308 277 52 78 chr17 64972077 64972230 -30300421 + RMER30 DNA MER1_type 20 168 -34 7 1080 1203 49 0 0 chr17 64972618 64972760 -30299891 + B1_Mus2 SINE Alu 1 142 -5 7 1080 678 189 16 0 chr17 64972841 64972963 -30299688 - B3 SINE B2 -91 125 2 7 1080 26 30 0 0 chr17 64972976 64973009 -30299642 + AT_rich Low_complexity Low_complexity 1 33 0 7 1080 537 283 86 30 chr17 64975035 64975232 -30297419 + B3 SINE B2 4 211 -5 7 1080 21 0 0 0 chr17 64975238 64975259 -30297392 + AT_rich Low_complexity Low_complexity 1 21 0 7 1080 345 47 0 0 chr17 64977427 64977470 -30295181 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1080 421 268 83 0 chr17 64978710 64978867 -30293784 + MER53 DNA hAT 15 184 -9 7 1080 324 291 47 0 chr17 64980002 64980129 -30292522 + Kanga2_a DNA Tc2 430 562 -326 7 1080 843 133 0 0 chr17 64981283 64981411 -30291240 - B1_Mur4 SINE Alu -9 141 14 7 1080 328 229 9 103 chr17 64981318 64981425 -30291226 - MT2B LTR ERVL -343 258 162 7 1080 262 235 86 0 chr17 64981704 64981785 -30290866 - Zaphod DNA Tip100 -17 4014 3927 7 1080 267 230 0 0 chr17 64983809 64983896 -30288755 + T-rich Low_complexity Low_complexity 1 87 0 7 1080 899 35 0 0 chr17 64983991 64984107 -30288544 + B1_Mm SINE Alu 25 140 -7 7 1080 276 0 68 0 chr17 64984107 64984151 -30288500 + (CAA)n Simple_repeat Simple_repeat 2 48 0 7 1080 270 0 0 0 chr17 64984183 64984213 -30288438 + (GGA)n Simple_repeat Simple_repeat 2 31 0 7 1080 378 0 0 0 chr17 64987516 64987558 -30285093 + (TC)n Simple_repeat Simple_repeat 1 42 0 7 1080 270 0 0 0 chr17 64987558 64987587 -30285064 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 1080 236 336 175 53 chr17 64988517 64988991 -30283660 - Tigger9b DNA MER2_type 0 624 93 7 1080 621 219 57 0 chr17 64989063 64989186 -30283465 - RSINE1 SINE B4 -33 132 3 7 1080 222 256 0 0 chr17 64989304 64989347 -30283304 + (TCCG)n Simple_repeat Simple_repeat 2 44 0 7 1080 299 310 134 13 chr17 64989586 64989743 -30282908 + MIR SINE MIR 38 213 -49 7 1080 236 197 0 0 chr17 64989764 64989822 -30282829 - ID2 SINE ID -2 81 24 7 1080 396 0 0 0 chr17 64989823 64989867 -30282784 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 1080 291 114 0 0 chr17 64990302 64990346 -30282305 + (TCC)n Simple_repeat Simple_repeat 3 46 0 7 1080 270 0 0 0 chr17 64992140 64992170 -30280481 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 7 1080 1147 171 17 69 chr17 64992281 64992514 -30280137 - URR1B DNA MER1_type 0 225 5 7 1080 420 20 0 0 chr17 64993427 64993476 -30279175 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1080 415 189 111 19 chr17 64993972 64994080 -30278571 - B1_Mur4 SINE Alu 0 150 33 7 1080 682 204 28 0 chr17 64995333 64995475 -30277176 - B1_Mus1 SINE Alu -1 147 2 7 1080 1825 66 31 4 chr17 64997636 64997896 -30274755 + L1_Mus3 LINE L1 6364 6630 -8 7 1080 27 29 0 0 chr17 64997896 64997930 -30274721 + AT_rich Low_complexity Low_complexity 1 34 0 7 1080 440 325 169 3 chr17 65001893 65002177 -30270474 + MER68 LTR ERVL 153 483 -80 1 1080 1407 143 12 0 chr17 65002242 65002487 -30270164 + L1_Mur3 LINE L1 2173 2420 -3460 2 1080 2535 158 168 88 chr17 65002519 65002665 -30269986 - RMER1A Other Other -7 1023 889 3 1080 261 0 0 0 chr17 65002665 65002694 -30269957 + (CCA)n Simple_repeat Simple_repeat 1 29 0 4 1080 2535 158 168 88 chr17 65002694 65003275 -30269376 - RMER1A Other Other -142 888 238 3 1080 338 256 23 23 chr17 65003781 65003869 -30268782 - MER2B DNA MER2_type -22 314 227 5 1080 798 267 6 0 chr17 65003885 65004046 -30268605 + ID_B1 SINE B4 48 209 -15 6 1080 443 261 51 32 chr17 65004013 65004171 -30268480 + B3 SINE B2 44 204 -12 7 1080 216 0 0 0 chr17 65004171 65004195 -30268456 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 8 1080 256 280 25 48 chr17 65004270 65004508 -30268143 - L1M2 LINE L1 -1626 4520 4296 9 1080 249 210 32 0 chr17 65005110 65005172 -30267479 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 1080 622 265 203 19 chr17 65005289 65005604 -30267047 - MTE2a LTR MaLR -2 377 5 1 1080 23 33 0 0 chr17 65005734 65005764 -30266887 + AT_rich Low_complexity Low_complexity 1 30 0 1 1080 366 42 0 0 chr17 65006738 65006786 -30265865 + (TTCC)n Simple_repeat Simple_repeat 3 50 0 1 1080 270 211 28 0 chr17 65007335 65007406 -30265245 - L1MC4 LINE L1 -376 7666 7594 1 1080 1413 189 64 69 chr17 65008497 65008872 -30263779 - ORR1D1 LTR MaLR -1 373 1 1 1080 806 202 171 0 chr17 65009149 65009342 -30263309 - URR1A DNA MER1_type 0 226 1 1 1080 1569 188 120 41 chr17 65009572 65010055 -30262596 - Lx9 LINE L1 -7 7637 7117 1 1080 546 228 0 49 chr17 65010065 65010208 -30262443 - Lx9 LINE L1 -1684 5960 5825 1 1080 5706 209 34 94 chr17 65010203 65010824 -30261827 - L1_Rod LINE L1 -2657 3190 2637 1 1080 1728 131 161 46 chr17 65010824 65011191 -30261460 - RLTR9E LTR ERVK 0 409 1 1 1080 5706 209 34 94 chr17 65011191 65011633 -30261018 - L1_Rod LINE L1 -3211 2636 2213 1 16 802 169 77 24 chr17 65011633 65011803 -30260848 - B2_Mm2 SINE B2 -15 180 2 2 1081 5706 211 33 88 chr17 65011803 65012932 -30259719 - L1_Rod LINE L1 -3635 2212 1124 1 1081 189 0 0 0 chr17 65012932 65012953 -30259698 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 1081 2030 256 85 15 chr17 65012953 65013591 -30259060 - L1_Rod LINE L1 -6485 1123 439 1 1081 388 302 18 36 chr17 65013660 65013825 -30258826 - L1_Rod LINE L1 -6937 235 74 2 1081 24 0 0 0 chr17 65014188 65014212 -30258439 + AT_rich Low_complexity Low_complexity 1 24 0 2 1081 378 91 68 68 chr17 65014262 65014438 -30258213 + (TCTA)n Simple_repeat Simple_repeat 3 178 0 2 1081 246 143 0 0 chr17 65014458 65014507 -30258144 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 1081 203 133 22 0 chr17 65014989 65015034 -30257617 + G-rich Low_complexity Low_complexity 5 50 0 2 1081 478 304 39 72 chr17 65019356 65019537 -30253114 - B4A SINE B4 -36 256 82 2 1081 875 176 78 55 chr17 65019543 65019760 -30252891 - B4 SINE B4 -69 223 2 2 1081 327 301 10 3 chr17 65020289 65020404 -30252247 - L1M2 LINE L1 -466 5825 5713 2 1081 30 59 0 0 chr17 65021103 65021154 -30251497 + AT_rich Low_complexity Low_complexity 1 51 0 3 1081 655 226 15 29 chr17 65022244 65022381 -30250270 - B3 SINE B2 0 216 82 3 1081 877 163 29 11 chr17 65023094 65023268 -30249383 + URR1A DNA MER1_type 47 223 -3 3 1081 409 236 39 73 chr17 65023268 65023307 -30249344 - CYRA11_Mm Unknown Y-chromosome -442 175 144 3 1081 258 301 121 0 chr17 65023668 65023751 -30248900 + B1F SINE Alu 1 93 -56 3 1081 777 203 90 76 chr17 65023716 65024000 -30248651 + ORR1D1 LTR MaLR 7 302 -82 3 1081 528 45 0 0 chr17 65024108 65024175 -30248476 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 1081 438 195 8 144 chr17 65024188 65024320 -30248331 + PB1D9 SINE Alu 1 114 -6 3 1081 951 97 0 0 chr17 65025402 65025554 -30247097 - L1_Mus1 LINE L1 -859 5708 5556 3 1081 234 0 0 0 chr17 65026780 65026806 -30245845 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 3 1081 408 131 0 0 chr17 65026820 65026881 -30245770 - B1_Mur4 SINE Alu -10 140 80 4 1081 388 248 113 17 chr17 65027873 65027988 -30244663 - B1F SINE Alu 0 149 24 4 1081 582 126 0 0 chr17 65027994 65028097 -30244554 + (TCC)n Simple_repeat Simple_repeat 3 105 0 4 1081 1149 82 0 0 chr17 65028597 65028744 -30243907 - B1_Mus2 SINE Alu 0 147 1 4 1081 1194 175 23 5 chr17 65029709 65029927 -30242724 - URR1B DNA MER1_type -1 224 3 4 1081 876 133 0 0 chr17 65030518 65030698 -30241953 + (TC)n Simple_repeat Simple_repeat 1 180 0 4 1081 263 220 121 0 chr17 65032780 65032871 -30239780 + MER106B DNA MER1_type 942 1043 -16 4 1081 260 233 130 22 chr17 65033425 65033517 -30239134 - MLT1A1 LTR MaLR -1 407 306 4 1081 1315 250 64 7 chr17 65034846 65035269 -30237382 - Lx7 LINE L1 -377 7319 6873 4 1081 372 236 0 0 chr17 65035369 65035458 -30237193 - Lx7 LINE L1 -250 7446 7358 4 1081 27 0 0 0 chr17 65035464 65035491 -30237160 + AT_rich Low_complexity Low_complexity 1 27 0 5 1081 306 0 0 0 chr17 65035508 65035542 -30237109 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 5 1081 292 267 17 25 chr17 65035542 65035661 -30236990 - Lx7 LINE L1 -332 7364 7247 4 1081 3571 183 21 16 chr17 65035664 65036776 -30235875 - Lx7 LINE L1 -1262 6434 5309 4 1081 26 64 0 0 chr17 65037180 65037227 -30235424 + AT_rich Low_complexity Low_complexity 1 47 0 5 1081 594 320 87 46 chr17 65037299 65037666 -30234985 + Tigger13a DNA MER2_type 390 771 0 5 1081 212 185 19 0 chr17 65038007 65038061 -30234590 + CT-rich Low_complexity Low_complexity 1 55 0 5 1081 240 291 149 35 chr17 65038077 65038191 -30234460 + L2a LINE L2 3295 3421 -5 5 1081 244 324 13 13 chr17 65038500 65038575 -30234076 + ID4_ SINE ID 3 77 -6 5 1081 354 369 96 28 chr17 65040038 65040289 -30232362 + B4 SINE B4 9 276 -16 5 1081 220 217 22 0 chr17 65040332 65040378 -30232273 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 1081 621 307 135 28 chr17 65040522 65041412 -30231239 + L1_Rod LINE L1 1206 2197 -3650 5 1081 216 0 0 0 chr17 65041412 65041436 -30231215 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6 1081 621 307 135 28 chr17 65041436 65041477 -30231174 + L1_Rod LINE L1 2198 2237 -3610 5 1081 965 300 95 28 chr17 65041663 65042509 -30230142 + L1MA4 LINE L1 4951 5905 -395 6 1081 345 24 0 0 chr17 65042713 65042755 -30229896 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1081 259 312 13 0 chr17 65042920 65042997 -30229654 + CT-rich Low_complexity Low_complexity 2 79 0 6 1081 263 271 29 0 chr17 65043001 65043071 -30229580 - ID4_ SINE ID -11 72 1 6 1081 426 248 9 60 chr17 65043185 65043301 -30229350 + Lx8 LINE L1 7199 7308 -165 6 1081 269 309 0 0 chr17 65043731 65043799 -30228852 + (CA)n Simple_repeat Simple_repeat 1 68 0 6 1081 938 168 71 18 chr17 65044384 65044595 -30228056 + RMER10A LTR ERVL 19 248 -150 6 1081 420 37 0 0 chr17 65044595 65044649 -30228002 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 1081 922 252 152 54 chr17 65044649 65044773 -30227878 + RMER10A LTR ERVL 249 386 -12 6 1081 194 344 42 21 chr17 65044832 65044927 -30227724 + L2b LINE L2 3066 3162 -213 6 1081 441 264 43 7 chr17 65045544 65045685 -30226966 - RLTR40 LTR ERVK -83 734 589 7 1081 1740 200 85 152 chr17 65045685 65046240 -30226411 - RLTR40 LTR ERVK -142 675 162 7 1081 891 208 40 0 chr17 65046240 65046442 -30226209 - B3 SINE B2 -6 210 1 7 1081 1740 200 85 152 chr17 65046442 65046595 -30226056 - RLTR40 LTR ERVK -656 161 15 7 1081 195 42 0 0 chr17 65047590 65047614 -30225037 + (TTG)n Simple_repeat Simple_repeat 1 24 0 7 1081 597 348 15 24 chr17 65051249 65051455 -30221196 - ID_B1 SINE B4 -14 210 7 7 1081 38 89 0 0 chr17 65051726 65051827 -30220824 + AT_rich Low_complexity Low_complexity 1 101 0 7 1081 755 203 139 78 chr17 65051965 65052195 -30220456 - RMER19B LTR ERVK -654 248 5 7 1081 236 266 14 41 chr17 65052858 65053003 -30219648 + CT-rich Low_complexity Low_complexity 3 143 0 7 1081 229 300 15 37 chr17 65053030 65053165 -30219486 + C-rich Low_complexity Low_complexity 3 134 0 7 1081 460 294 149 60 chr17 65053459 65053774 -30218877 - L1MEg LINE L1 -4522 1562 1220 7 1081 471 170 0 0 chr17 65055006 65055106 -30217545 + (CA)n Simple_repeat Simple_repeat 2 101 0 8 1081 776 274 36 13 chr17 65056972 65057234 -30215417 - Lx8 LINE L1 -856 6788 6383 8 1081 297 51 0 0 chr17 65059482 65059521 -30213130 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 8 1081 808 193 14 0 chr17 65059799 65059944 -30212707 - B1_Mus1 SINE Alu -1 147 1 8 1081 267 133 0 0 chr17 65060690 65060735 -30211916 + (TC)n Simple_repeat Simple_repeat 2 46 0 8 1081 441 95 0 0 chr17 65060770 65060833 -30211818 + (TG)n Simple_repeat Simple_repeat 2 64 0 8 1081 397 264 47 0 chr17 65062343 65062449 -30210202 - B1F SINE Alu -1 148 38 8 1081 642 253 56 5 chr17 65062470 65062665 -30209986 - B3 SINE B2 -10 206 2 8 1081 345 125 0 0 chr17 65062715 65062771 -30209880 + (T)n Simple_repeat Simple_repeat 1 56 0 8 1081 202 195 0 0 chr17 65064909 65064950 -30207701 + C-rich Low_complexity Low_complexity 1 41 0 8 1081 221 275 56 42 chr17 65065168 65065240 -30207411 + B1F SINE Alu 16 88 -61 9 1081 241 266 31 0 chr17 65065258 65065322 -30207329 + ID4_ SINE ID 5 70 -13 9 1081 264 77 0 0 chr17 65066355 65066394 -30206257 + (T)n Simple_repeat Simple_repeat 1 39 0 9 1081 479 28 28 0 chr17 65067140 65067211 -30205440 + L1Md_F3 LINE L1 6512 6584 0 9 1081 468 285 162 12 chr17 65067391 65067558 -30205093 - B3A SINE B2 -6 192 1 9 1081 640 267 58 0 chr17 65068115 65068287 -30204364 + B3 SINE B2 2 183 -33 9 1081 216 0 0 0 chr17 65068480 65068504 -30204147 + (T)n Simple_repeat Simple_repeat 1 24 0 9 1081 347 326 58 82 chr17 65070930 65071187 -30201464 - Charlie2b DNA MER1_type -723 2059 1809 9 1081 184 167 20 20 chr17 65071294 65071343 -30201308 + CT-rich Low_complexity Low_complexity 3 51 0 9 1081 571 263 59 55 chr17 65072147 65072458 -30200193 - L1MA7 LINE L1 -1510 5963 5643 9 1081 387 0 0 0 chr17 65072482 65072525 -30200126 + (TAGA)n Simple_repeat Simple_repeat 1 43 0 1 1081 970 203 24 28 chr17 65072703 65072916 -30199735 - Lx8 LINE L1 -484 6989 6778 1 1081 489 18 0 0 chr17 65072911 65072967 -30199684 - L1_Mus1 LINE L1 -410 6157 6102 1 1081 3257 64 5 25 chr17 65072967 65073399 -30199252 + L1_Mus1 LINE L1 6145 6567 0 1 1081 24 0 0 0 chr17 65073434 65073458 -30199193 + AT_rich Low_complexity Low_complexity 1 24 0 1 1081 445 259 107 20 chr17 65073458 65073608 -30199043 - Lx8 LINE L1 -681 6792 6630 1 1081 342 217 230 7 chr17 65073625 65073764 -30198887 + MTD LTR MaLR 17 186 -235 1 1081 378 240 31 0 chr17 65073798 65073894 -30198757 + MTD LTR MaLR 307 405 -14 1 1081 1160 198 94 12 chr17 65073910 65074166 -30198485 - Lx8 LINE L1 -849 6624 6348 1 1081 207 0 0 0 chr17 65074424 65074447 -30198204 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1081 945 69 0 0 chr17 65074447 65074578 -30198073 - B1_Mus1 SINE Alu 0 148 18 1 1081 4222 69 0 0 chr17 65075839 65076433 -30196218 - L1_Mus3 LINE L1 -517 6121 5528 1 1081 3011 71 2 62 chr17 65076434 65076869 -30195782 + L1_Mus3 LINE L1 6119 6527 -111 1 1081 188 35 35 0 chr17 65077847 65077876 -30194775 + (TTTTTG)n Simple_repeat Simple_repeat 3 32 0 1 1081 225 267 0 0 chr17 65078378 65078423 -30194228 - tRNA-Ala-GCY_ tRNA tRNA -9 66 22 1 1081 558 43 0 0 chr17 65078592 65078661 -30193990 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 1081 1654 220 43 0 chr17 65078942 65079310 -30193341 + MTD LTR MaLR 1 384 -35 1 1081 239 203 0 14 chr17 65079512 65079582 -30193069 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 1081 323 195 13 13 chr17 65079582 65079660 -30192991 + HAL1-3A_ME LINE L1 1975 2052 -806 1 1081 261 0 0 0 chr17 65081122 65081151 -30191500 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 1081 245 288 99 12 chr17 65086574 65086655 -30185996 - MER102c DNA MER1_type -96 235 148 1 1081 384 22 0 0 chr17 65086723 65086768 -30185883 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 1081 261 0 0 0 chr17 65086768 65086796 -30185855 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1081 728 179 37 7 chr17 65086826 65086961 -30185690 - B1_Mur2 SINE Alu -6 143 5 1 1081 894 168 0 0 chr17 65088924 65089073 -30183578 - B1_Mur4 SINE Alu -1 149 1 1 1081 281 250 200 26 chr17 65089383 65089498 -30183153 - ID_B1 SINE B4 0 224 90 1 1081 404 253 110 15 chr17 65090291 65090477 -30182174 + B3A SINE B2 6 212 -4 1 1081 414 0 0 0 chr17 65091289 65091335 -30181316 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1081 901 270 126 29 chr17 65092323 65092704 -30179947 - MTD LTR MaLR 0 419 2 1 1081 1769 169 64 25 chr17 65094547 65094905 -30177746 - ORR1D1 LTR MaLR -2 372 1 1 1081 273 252 73 73 chr17 65096652 65096789 -30175862 - Lx7 LINE L1 0 7696 7560 1 1081 584 255 12 19 chr17 65096789 65096949 -30175702 - Lx7 LINE L1 -285 7411 7253 1 1081 745 232 37 0 chr17 65097193 65097383 -30175268 - Lx7 LINE L1 -377 7319 7123 1 1081 674 196 98 0 chr17 65097391 65097534 -30175117 - Lx7 LINE L1 -800 6896 6740 1 1081 1085 289 17 7 chr17 65097565 65097858 -30174793 - Lx7 LINE L1 -1253 6443 6148 1 1081 333 318 20 91 chr17 65099183 65099380 -30173271 - B4 SINE B4 -109 183 1 1 1081 216 0 0 0 chr17 65102030 65102054 -30170597 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1081 212 163 0 0 chr17 65104997 65105040 -30167611 + A-rich Low_complexity Low_complexity 3 45 0 1 1081 357 24 0 0 chr17 65105097 65105139 -30167512 + (TC)n Simple_repeat Simple_repeat 1 42 0 1 1081 573 15 0 0 chr17 65105140 65105206 -30167445 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 1081 25 0 0 0 chr17 65105234 65105259 -30167392 + AT_rich Low_complexity Low_complexity 1 25 0 1 1081 6093 49 14 25 chr17 65105274 65106047 -30166604 - L1Md_F2 LINE L1 -13 6569 5805 1 1081 286 326 0 0 chr17 65106862 65106957 -30165694 + MER5A1 DNA MER1_type 26 120 -46 1 1081 198 0 0 0 chr17 65107715 65107737 -30164914 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1 1081 1336 42 323 0 chr17 65107803 65108162 -30164489 - MT2C_Mm LTR ERVL 0 475 1 1 1081 243 0 0 0 chr17 65109719 65109746 -30162905 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 1081 494 204 284 0 chr17 65111136 65111347 -30161304 + MTC LTR MaLR 1 271 -150 1 1081 1359 102 97 0 chr17 65111360 65111566 -30161085 + URR1A DNA MER1_type 1 226 0 1 1081 285 225 25 12 chr17 65111566 65111647 -30161004 + MTC LTR MaLR 335 416 -3 1 1081 215 31 31 0 chr17 65111963 65111995 -30160656 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 1 1081 1177 68 7 0 chr17 65112001 65112147 -30160504 - B1_Mus2 SINE Alu 0 147 1 1 1081 2078 119 228 43 chr17 65112344 65112809 -30159842 + RLTR6_Mm LTR ERV1 37 587 -67 1 1081 225 0 0 0 chr17 65112862 65112887 -30159764 + (TGG)n Simple_repeat Simple_repeat 2 26 0 1 1081 269 292 37 28 chr17 65112989 65113098 -30159553 + MIR3 SINE MIR 9 118 -90 1 1081 477 271 72 17 chr17 65113634 65113814 -30158837 + B3A SINE B2 5 194 -4 1 1081 244 333 59 55 chr17 65114306 65114544 -30158107 + MLT1D LTR MaLR 3 241 -264 1 1081 207 0 0 0 chr17 65115203 65115226 -30157425 + (CAAG)n Simple_repeat Simple_repeat 4 26 0 1 1081 1623 156 139 46 chr17 65116130 65116541 -30156110 - RLTR28 LTR ERVL -75 449 1 1 1081 21 36 0 0 chr17 65117257 65117285 -30155366 + AT_rich Low_complexity Low_complexity 1 28 0 1 1081 300 270 116 17 chr17 65117646 65117827 -30154824 + L1M5 LINE L1 5260 5458 -666 1 1081 539 305 16 21 chr17 65118106 65118297 -30154354 - Lx9 LINE L1 -301 7343 7154 1 1081 396 271 68 20 chr17 65118292 65118439 -30154212 + Lx9 LINE L1 7386 7539 -105 1 1081 699 307 19 5 chr17 65118563 65118769 -30153882 + MER58A DNA MER1_type 15 223 -1 1 1081 288 0 0 0 chr17 65118883 65118915 -30153736 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 1081 189 0 0 0 chr17 65119280 65119301 -30153350 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1081 357 24 0 0 chr17 65120263 65120305 -30152346 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1081 849 250 32 38 chr17 65120370 65120711 -30151940 + RLTR15 LTR ERVK 3 341 -18 1 1081 184 353 67 15 chr17 65122813 65122948 -30149703 + MER5A DNA MER1_type 6 147 -42 1 1081 198 0 0 0 chr17 65127037 65127059 -30145592 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 1081 234 318 106 0 chr17 65127566 65127651 -30145000 + MamRep38 DNA hAT 191 284 -11 1 1081 2302 169 36 17 chr17 65128097 65128573 -30144078 - RLTR17 LTR ERVK 0 692 208 1 1081 216 0 0 0 chr17 65131147 65131171 -30141480 + (TTTTTA)n Simple_repeat Simple_repeat 1 24 0 1 1081 1571 192 22 38 chr17 65131210 65131447 -30141204 - RMER17C LTR ERVK 0 410 183 1 1081 1168 91 0 11 chr17 65131447 65131625 -30141026 + (GGGAA)n Simple_repeat Simple_repeat 1 176 0 1 1081 1571 192 22 38 chr17 65131625 65131804 -30140847 - RMER17C LTR ERVK -228 182 1 1 1081 222 336 129 0 chr17 65133153 65133293 -30139358 + L2a LINE L2 3267 3424 -2 1 1081 841 189 91 11 chr17 65133623 65133810 -30138841 + B3 SINE B2 5 206 -10 1 1081 309 155 0 0 chr17 65135281 65135339 -30137312 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 1081 390 21 0 0 chr17 65136034 65136081 -30136570 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1081 414 100 0 0 chr17 65136505 65136565 -30136086 + (GAAA)n Simple_repeat Simple_repeat 2 61 0 1 1081 184 263 224 0 chr17 65138547 65138623 -30134028 + MIRm SINE MIR 24 116 -160 1 1081 525 83 0 0 chr17 65140378 65140462 -30132189 + (TTTTG)n Simple_repeat Simple_repeat 2 85 0 1 1081 266 216 14 0 chr17 65141234 65141308 -30131343 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 1081 1841 200 58 141 chr17 65141308 65141913 -30130738 - RMER1B Other Other -8 1058 504 1 1082 22 0 0 0 chr17 65142918 65142940 -30129711 + AT_rich Low_complexity Low_complexity 1 22 0 1 1082 313 287 98 30 chr17 65142999 65143132 -30129519 - ID_B1 SINE B4 -1 223 82 1 1082 1969 157 120 18 chr17 65143963 65144345 -30128306 - MTC LTR MaLR 0 421 1 1 1082 398 257 93 20 chr17 65144487 65144613 -30128038 + RSINE1 SINE B4 3 137 -28 1 1082 327 25 0 0 chr17 65144613 65144653 -30127998 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1082 398 257 93 20 chr17 65144653 65144677 -30127974 + RSINE1 SINE B4 138 164 -1 1 1082 225 0 0 0 chr17 65145152 65145177 -30127474 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1 1082 223 204 4 90 chr17 65145876 65145957 -30126694 - MIRb SINE MIR -89 187 109 1 1082 952 236 9 24 chr17 65146043 65146256 -30126395 - B3 SINE B2 -6 210 1 1 1082 808 304 144 24 chr17 65146259 65146856 -30125795 - L1MA6 LINE L1 0 6300 5632 1 1082 705 151 12 24 chr17 65147480 65147650 -30125001 + (CA)n Simple_repeat Simple_repeat 2 169 0 1 1082 340 38 48 71 chr17 65147722 65147806 -30124845 + (TCTCTG)n Simple_repeat Simple_repeat 2 83 0 1 1082 294 29 0 0 chr17 65147808 65147843 -30124808 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1082 729 333 35 38 chr17 65147860 65148147 -30124504 + B4 SINE B4 6 291 -1 1 1082 1220 204 179 7 chr17 65148486 65148836 -30123815 - MTD LTR MaLR -21 398 10 1 1082 226 22 19 115 chr17 65148857 65148909 -30123742 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 1082 297 301 0 50 chr17 65150077 65150196 -30122455 + MLT1A LTR MaLR 261 373 -1 1 1082 1673 163 62 7 chr17 65150602 65150910 -30121741 + MTC LTR MaLR 5 329 -92 1 1082 2137 121 61 33 chr17 65150918 65151311 -30121340 - MTC LTR MaLR -8 413 10 1 1082 509 190 10 10 chr17 65151317 65151418 -30121233 + MTC LTR MaLR 321 421 0 1 1082 207 0 0 0 chr17 65156346 65156369 -30116282 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1082 432 139 0 0 chr17 65156670 65156749 -30115902 + (TCCC)n Simple_repeat Simple_repeat 2 80 0 1 1082 6298 239 116 29 chr17 65156771 65157416 -30115235 - Lx9 LINE L1 0 7644 6899 1 1082 2154 175 28 14 chr17 65157416 65157851 -30114800 + BGLII_B LTR ERVK 1 441 0 1 1082 7536 214 68 40 chr17 65157851 65160798 -30111853 - Lx9 LINE L1 -746 6898 3858 1 1082 233 311 44 29 chr17 65161147 65161283 -30111368 - Lx9 LINE L1 -7019 589 452 1 1082 1330 281 48 10 chr17 65161320 65161737 -30110914 - Lx9 LINE L1 -790 6854 6422 1 1082 1455 226 108 58 chr17 65161738 65162345 -30110306 + Lx9 LINE L1 5430 6083 -1613 1 1082 405 0 0 0 chr17 65162623 65162668 -30109983 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1082 651 256 16 72 chr17 65162953 65163147 -30109504 - B3 SINE B2 -33 183 1 1 1082 226 298 193 17 chr17 65164699 65164880 -30107771 - MIR SINE MIR -46 216 4 1 1082 264 59 0 0 chr17 65165480 65165514 -30107137 + (CAGC)n Simple_repeat Simple_repeat 1 34 0 2 1082 493 280 419 27 chr17 65166309 65166500 -30106151 + B4 SINE B4 11 276 -16 2 1082 278 346 0 0 chr17 65166500 65166601 -30106050 + (CATATA)n Simple_repeat Simple_repeat 6 106 0 2 1082 207 180 40 0 chr17 65166696 65166746 -30105905 + (TATATG)n Simple_repeat Simple_repeat 1 52 0 2 1082 195 204 0 0 chr17 65166786 65166835 -30105816 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1082 181 219 0 0 chr17 65167898 65167930 -30104721 + L3 LINE CR1 763 794 -3695 2 1082 248 326 0 7 chr17 65169771 65169916 -30102735 + (TA)n Simple_repeat Simple_repeat 2 145 0 2 1082 916 273 97 23 chr17 65170668 65170968 -30101683 + ORR1E LTR MaLR 2 323 -36 2 1082 270 160 0 0 chr17 65171905 65171955 -30100696 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1082 306 172 52 0 chr17 65171958 65172016 -30100635 + HAL1-3A_ME LINE L1 1976 2036 -822 2 1082 638 188 117 0 chr17 65172018 65172146 -30100505 - RSINE1 SINE B4 -19 146 4 2 1082 218 211 0 0 chr17 65172408 65172446 -30100205 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 2 1082 225 225 24 24 chr17 65172575 65172657 -30099994 + L1M2 LINE L1 4297 4378 -1765 2 1082 496 362 69 65 chr17 65173679 65173859 -30098792 - B4 SINE B4 -16 276 96 2 1082 976 193 67 29 chr17 65173859 65174067 -30098584 - B3 SINE B2 0 216 1 2 1082 496 362 69 65 chr17 65174067 65174161 -30098490 - B4 SINE B4 -197 95 1 2 1082 28 0 0 0 chr17 65174591 65174619 -30098032 + AT_rich Low_complexity Low_complexity 1 28 0 2 1082 410 248 39 65 chr17 65175247 65175402 -30097249 + CYRA11_Mm Unknown Y-chromosome 162 312 -305 2 1082 913 138 213 11 chr17 65175266 65175449 -30097202 - URR1A DNA MER1_type -6 220 1 2 1082 268 368 136 45 chr17 65175741 65176148 -30096503 - MamGypLTR1a LTR Gypsy -323 461 18 2 1082 504 32 0 0 chr17 65176223 65176285 -30096366 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 1082 950 317 50 53 chr17 65177226 65177642 -30095009 - MTD LTR MaLR -4 415 1 2 1082 216 0 0 0 chr17 65177845 65177869 -30094782 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1082 204 40 0 0 chr17 65178412 65178437 -30094214 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1082 382 265 10 0 chr17 65178515 65178613 -30094038 - MamRep564 Unknown Unknown -151 206 108 2 1082 211 365 78 78 chr17 65178781 65179140 -30093511 - L2b LINE L2 -18 3357 2999 2 1082 230 105 0 0 chr17 65179632 65179670 -30092981 - tRNA-Gly-GGA tRNA tRNA -37 38 1 2 1082 1560 205 71 42 chr17 65179747 65180154 -30092497 - MTD LTR MaLR 0 419 1 2 1082 238 297 43 43 chr17 65180370 65180486 -30092165 + PB1D9 SINE Alu 2 117 -3 2 1082 672 56 0 0 chr17 65180554 65180643 -30092008 + (GA)n Simple_repeat Simple_repeat 2 90 0 2 1082 206 270 29 39 chr17 65181439 65181543 -30091108 + (TATATG)n Simple_repeat Simple_repeat 4 106 0 2 1082 756 230 40 17 chr17 65181642 65181819 -30090832 + B3A SINE B2 1 181 -17 2 1082 33 66 0 0 chr17 65181826 65181887 -30090764 + AT_rich Low_complexity Low_complexity 1 61 0 2 1082 447 243 65 95 chr17 65181901 65182069 -30090582 - RSINE1 SINE B4 -1 164 2 2 1082 619 251 57 23 chr17 65182188 65182363 -30090288 + B4A SINE B4 95 275 -17 2 1082 423 0 0 0 chr17 65182416 65182463 -30090188 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 1082 687 145 0 17 chr17 65182872 65182991 -30089660 + B1_Mm SINE Alu 31 147 0 2 1082 363 167 0 0 chr17 65183014 65183080 -30089571 + GA-rich Low_complexity Low_complexity 1 66 0 2 1082 369 222 261 59 chr17 65183081 65183234 -30089417 + MTD LTR MaLR 196 379 -40 2 1082 199 383 86 0 chr17 65183461 65183623 -30089028 + MIRb SINE MIR 3 178 -90 2 1082 403 307 71 40 chr17 65183990 65184214 -30088437 - MIR SINE MIR -10 252 22 2 1082 1092 328 31 14 chr17 65184649 65185008 -30087643 + MLT1A0 LTR MaLR 1 365 0 2 1082 193 128 21 21 chr17 65185417 65185465 -30087186 + C-rich Low_complexity Low_complexity 4 51 0 2 1082 375 331 22 37 chr17 65185996 65186131 -30086520 + MER5A DNA MER1_type 53 185 -4 2 1082 205 196 43 21 chr17 65186142 65186189 -30086462 - MIR SINE MIR -61 147 100 2 1082 21 0 0 0 chr17 65186705 65186726 -30085925 + GC_rich Low_complexity Low_complexity 1 21 0 2 1082 29 47 0 0 chr17 65187172 65187215 -30085436 + AT_rich Low_complexity Low_complexity 1 43 0 2 1082 745 232 7 0 chr17 65187471 65187609 -30085042 - B1F1 SINE Alu -8 141 3 2 1082 1127 61 0 13 chr17 65188385 65188535 -30084116 + B2_Mm2 SINE B2 1 148 -47 2 1082 21 36 0 0 chr17 65188759 65188787 -30083864 + AT_rich Low_complexity Low_complexity 1 28 0 2 1082 24 0 0 0 chr17 65189640 65189664 -30082987 + AT_rich Low_complexity Low_complexity 1 24 0 2 1082 650 255 138 5 chr17 65190071 65190260 -30082391 - B3 SINE B2 -1 215 2 2 1082 433 332 152 32 chr17 65190417 65190843 -30081808 - L2a LINE L2 -87 3339 2863 2 1082 1025 257 16 131 chr17 65190843 65191224 -30081427 + ORR1E LTR MaLR 1 337 -22 2 1082 186 208 0 0 chr17 65191664 65191712 -30080939 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1082 183 271 0 0 chr17 65191763 65191822 -30080829 + (TA)n Simple_repeat Simple_repeat 1 59 0 2 1082 237 336 16 65 chr17 65191822 65191946 -30080705 - RMER12 LTR ERVK -472 850 733 2 1082 729 67 60 7 chr17 65192758 65192909 -30079742 + (TCTA)n Simple_repeat Simple_repeat 3 161 0 2 1082 365 120 46 40 chr17 65192922 65193096 -30079555 + (TCTA)n Simple_repeat Simple_repeat 4 178 0 2 1082 28 0 0 0 chr17 65194042 65194070 -30078581 + AT_rich Low_complexity Low_complexity 1 28 0 2 1082 1204 54 0 0 chr17 65194240 65194387 -30078264 + B1_Mus1 SINE Alu 2 148 0 2 1082 406 263 8 128 chr17 65195577 65195802 -30076849 - Charlie8 DNA MER1_type -2242 186 1 2 1082 231 114 0 0 chr17 65196652 65196687 -30075964 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1082 268 282 64 0 chr17 65196771 65196849 -30075802 + RSINE1 SINE B4 3 85 -80 2 1082 360 0 0 0 chr17 65197164 65197204 -30075447 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1082 22 0 0 0 chr17 65197719 65197741 -30074910 + AT_rich Low_complexity Low_complexity 1 22 0 2 1082 1023 323 119 3 chr17 65198026 65198405 -30074246 + MER45B DNA Tip100 75 497 -543 2 1082 306 174 43 11 chr17 65198432 65198525 -30074126 + CT-rich Low_complexity Low_complexity 2 97 0 2 1082 283 322 32 11 chr17 65198674 65198768 -30073883 - B4A SINE B4 -191 101 6 2 1082 601 336 21 8 chr17 65198768 65199002 -30073649 + MER45B DNA Tip100 561 797 -243 2 1082 359 183 49 0 chr17 65199088 65199170 -30073481 - Lx7 LINE L1 -1 7695 7610 2 1082 223 274 0 0 chr17 65199186 65199237 -30073414 + T-rich Low_complexity Low_complexity 2 52 0 2 1082 267 31 0 0 chr17 65199318 65199350 -30073301 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 2 1082 313 58 19 19 chr17 65199386 65199439 -30073212 + (CCA)n Simple_repeat Simple_repeat 1 53 0 2 1082 1750 248 14 7 chr17 65199443 65199877 -30072774 - Lx7 LINE L1 -382 7314 6878 2 1082 469 229 26 2 chr17 65199881 65200006 -30072645 - ORR1C2 LTR MaLR -81 297 160 2 1082 2976 210 39 22 chr17 65199998 65200632 -30072019 - ORR1C2-int LTR MaLR -863 646 2 2 1082 1567 205 73 28 chr17 65200649 65200831 -30071820 - ORR1C2 LTR MaLR -12 372 173 2 1082 261 0 0 0 chr17 65200831 65200860 -30071791 + (GA)n Simple_repeat Simple_repeat 2 30 0 2 1082 1567 205 73 28 chr17 65200860 65201033 -30071618 - ORR1C2 LTR MaLR -212 172 2 2 1082 331 180 66 0 chr17 65201033 65201092 -30071559 - B3 SINE B2 -148 68 6 2 1082 323 332 35 40 chr17 65201403 65201604 -30071047 - L1MEc LINE L1 -634 5712 5513 2 1082 518 0 16 0 chr17 65202059 65202121 -30070530 + (TCTA)n Simple_repeat Simple_repeat 2 64 0 2 1082 201 197 14 43 chr17 65202163 65202232 -30070419 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 2 1082 247 277 26 45 chr17 65202287 65202442 -30070209 - L1MEc LINE L1 -930 5389 5238 2 1082 310 222 133 0 chr17 65202787 65202877 -30069774 - L1MEc LINE L1 -1492 4827 4726 2 1082 302 190 136 25 chr17 65202931 65203012 -30069639 - B1_Mur2 SINE Alu -1 148 59 2 1082 237 310 25 31 chr17 65203376 65203536 -30069115 - L1MEc LINE L1 -1902 4417 4259 2 1082 597 331 108 51 chr17 65203682 65204715 -30067936 - L1MEc LINE L1 -2988 3331 2229 2 1082 184 222 106 45 chr17 65205236 65205302 -30067349 + MIRm SINE MIR 115 184 -92 2 1082 613 199 293 6 chr17 65205434 65205601 -30067050 - B3 SINE B2 0 216 2 2 1082 257 289 36 86 chr17 65205788 65205928 -30066723 - MLT1A0 LTR MaLR -254 154 22 2 1082 2288 152 15 8 chr17 65206396 65206786 -30065865 - ORR1B1 LTR MaLR 0 394 2 2 1082 309 287 60 53 chr17 65206880 65207031 -30065620 - L1MEc LINE L1 -6211 189 38 2 1082 270 0 0 0 chr17 65207859 65207889 -30064762 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 1082 1091 295 11 21 chr17 65207913 65208194 -30064457 - B4A SINE B4 -9 283 6 2 1082 457 312 72 0 chr17 65208688 65208701 -30063950 - ID_B1 SINE B4 -1 223 90 2 1082 471 297 27 9 chr17 65208701 65208813 -30063838 - B1F1 SINE Alu -27 122 9 2 1082 338 321 28 23 chr17 65208999 65209213 -30063438 + L1MA9 LINE L1 5819 6033 -279 2 1082 312 78 46 15 chr17 65209247 65209289 -30063362 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 2 1082 1158 68 0 14 chr17 65209289 65209437 -30063214 - B1_Mm SINE Alu -1 146 1 2 1082 312 78 46 15 chr17 65209437 65209459 -30063192 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2 1082 749 209 3 0 chr17 65209562 65209931 -30062720 + (CA)n Simple_repeat Simple_repeat 1 370 0 2 1082 204 105 207 17 chr17 65210809 65210867 -30061784 - MER5B DNA MER1_type -74 104 36 2 1082 243 0 0 0 chr17 65211906 65211933 -30060718 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1082 2657 133 62 4 chr17 65212759 65212873 -30059778 - RMER1A Other Other -15 1015 887 2 1082 207 0 0 0 chr17 65212873 65212896 -30059755 + (CCA)n Simple_repeat Simple_repeat 1 23 0 2 1082 2657 133 62 4 chr17 65212896 65213249 -30059402 - RMER1A Other Other -144 886 522 2 1082 303 326 54 8 chr17 65213295 65213425 -30059226 - L1MB7 LINE L1 -95 6089 5954 2 1082 252 0 0 0 chr17 65213562 65213590 -30059061 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1082 24 32 0 0 chr17 65213797 65213828 -30058823 + AT_rich Low_complexity Low_complexity 1 31 0 2 1082 348 214 15 37 chr17 65214104 65214240 -30058411 - Lx9 LINE L1 -28 7616 7484 2 1082 381 162 0 0 chr17 65214247 65214315 -30058336 + (CA)n Simple_repeat Simple_repeat 2 69 0 2 1082 2474 280 64 23 chr17 65214315 65215345 -30057306 - Lx9 LINE L1 -128 7516 6445 2 1082 1418 215 37 42 chr17 65215988 65216342 -30056309 - ORR1D1 LTR MaLR 0 374 23 3 1082 264 336 75 0 chr17 65217938 65218045 -30054606 - MLT1C LTR MaLR 0 467 353 3 1082 1060 176 88 5 chr17 65218210 65218415 -30054236 - URR1B DNA MER1_type -3 222 1 3 1082 339 296 132 43 chr17 65218415 65218468 -30054183 + CYRA11_Mm Unknown Y-chromosome 174 454 -163 3 1082 512 279 104 35 chr17 65218664 65218894 -30053757 + MER2 DNA MER2_type 3 248 -97 3 1082 2994 21 0 0 chr17 65219264 65219601 -30053050 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 1082 261 0 0 0 chr17 65220468 65220497 -30052154 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 3 1082 229 171 33 22 chr17 65222239 65222329 -30050322 + (TA)n Simple_repeat Simple_repeat 2 92 0 3 1082 293 230 15 54 chr17 65224170 65224503 -30048148 + (TCTG)n Simple_repeat Simple_repeat 1 319 0 3 1082 213 39 0 0 chr17 65225860 65225886 -30046765 + (TGGG)n Simple_repeat Simple_repeat 1 26 0 3 1082 210 191 0 41 chr17 65226123 65226172 -30046479 + GA-rich Low_complexity Low_complexity 1 47 0 3 1082 360 43 0 0 chr17 65226469 65226515 -30046136 + (CATA)n Simple_repeat Simple_repeat 1 46 0 3 1082 255 103 0 0 chr17 65226966 65227005 -30045646 + (A)n Simple_repeat Simple_repeat 1 39 0 3 1082 220 258 45 15 chr17 65228003 65228070 -30044581 + L4 LINE RTE 1384 1452 -577 3 1082 441 0 0 0 chr17 65228131 65228180 -30044471 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 1082 270 0 0 0 chr17 65228235 65228265 -30044386 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1082 449 320 33 0 chr17 65229088 65229238 -30043413 - MLT2D LTR ERVL -252 162 8 3 1082 423 0 0 0 chr17 65229300 65229347 -30043304 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 1082 288 0 0 0 chr17 65229348 65229380 -30043271 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1082 31768 113 19 7 chr17 65229559 65233750 -30038901 + L1_Mus1 LINE L1 476 4734 -1149 3 1082 338 0 24 0 chr17 65233750 65233792 -30038859 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 1082 31768 82 7 2 chr17 65233792 65235629 -30037022 + L1_Mus1 LINE L1 4735 6567 0 3 1082 572 325 77 0 chr17 65235864 65236033 -30036618 + B3A SINE B2 1 182 -16 3 1082 983 213 98 10 chr17 65238093 65238297 -30034354 - URR1B DNA MER1_type -3 222 1 3 1082 737 330 38 44 chr17 65238339 65238706 -30033945 - MLT1A0 LTR MaLR 0 365 1 3 1082 526 246 40 0 chr17 65238952 65239078 -30033573 - ID_B1 SINE B4 -21 203 73 3 1082 511 346 89 39 chr17 65239359 65239554 -30033097 - L1ME3A LINE L1 -12 6161 5952 3 1082 1132 215 24 5 chr17 65239554 65239760 -30032891 + B3 SINE B2 1 210 -6 3 1082 511 346 89 39 chr17 65239760 65240127 -30032524 - L1ME3A LINE L1 -222 5951 5571 3 1082 793 309 167 52 chr17 65240186 65241222 -30031429 - L1ME3A LINE L1 -1037 5109 3955 3 1082 245 305 115 69 chr17 65243179 65243397 -30029254 + L2 LINE L2 2000 2227 -1192 3 1082 284 403 79 37 chr17 65244015 65244229 -30028422 - LTR33B LTR ERVL -270 233 11 3 1082 307 256 172 24 chr17 65244434 65244690 -30027961 + L1M5 LINE L1 5138 5428 -766 3 1082 2290 148 72 30 chr17 65248296 65248700 -30023951 - MTC LTR MaLR 0 421 1 3 1082 1290 61 0 0 chr17 65248932 65249080 -30023571 - B1_Mus1 SINE Alu 0 148 1 3 1082 497 209 9 45 chr17 65249589 65249699 -30022952 + B3 SINE B2 2 107 -109 3 1082 245 303 0 13 chr17 65249689 65249766 -30022885 - MLT1C LTR MaLR -342 125 50 3 1082 486 83 0 0 chr17 65249776 65249848 -30022803 + (TG)n Simple_repeat Simple_repeat 1 72 0 3 1082 384 88 0 0 chr17 65249848 65249905 -30022746 + (GA)n Simple_repeat Simple_repeat 2 58 0 3 1082 189 298 64 55 chr17 65252595 65252705 -30019946 - L2c LINE L2 -1 3386 3276 3 1082 324 70 0 0 chr17 65252878 65252921 -30019730 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1082 378 0 0 0 chr17 65252921 65252962 -30019689 + (GA)n Simple_repeat Simple_repeat 1 42 0 3 1082 430 331 28 45 chr17 65252975 65253157 -30019494 - MLT1A LTR MaLR -22 368 174 3 1082 214 296 0 27 chr17 65253165 65253238 -30019413 + GA-rich Low_complexity Low_complexity 2 72 0 3 1082 433 203 136 30 chr17 65253271 65253403 -30019248 - MLT1A LTR MaLR -216 158 13 3 1082 379 216 194 10 chr17 65253721 65253819 -30018832 + B3A SINE B2 3 118 -80 3 1082 255 122 0 0 chr17 65253832 65253881 -30018770 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 1082 247 257 25 84 chr17 65253892 65254011 -30018640 + L1MA4A LINE L1 5816 5927 -376 3 1082 501 246 8 53 chr17 65254728 65254861 -30017790 + B1F SINE Alu 6 132 -17 3 1082 216 0 0 0 chr17 65254877 65254901 -30017750 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1082 324 0 0 0 chr17 65255798 65255834 -30016817 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1082 310 325 0 0 chr17 65257227 65257310 -30015341 + ID4_ SINE ID 1 83 0 3 1082 396 0 0 0 chr17 65257333 65257377 -30015274 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1082 207 0 0 0 chr17 65257377 65257399 -30015252 + (CG)n Simple_repeat Simple_repeat 1 23 0 3 1082 2420 172 55 15 chr17 65257635 65257959 -30014692 + RLTR25B LTR ERVK 1 323 -705 3 1082 258 32 0 0 chr17 65257959 65257990 -30014661 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 1082 2420 184 78 6 chr17 65257990 65258424 -30014227 + RLTR25B LTR ERVK 324 1028 0 3 1082 324 0 0 0 chr17 65258568 65258604 -30014047 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 1082 25 51 0 0 chr17 65260344 65260383 -30012268 + AT_rich Low_complexity Low_complexity 1 39 0 3 1082 21 0 0 0 chr17 65261421 65261442 -30011209 + AT_rich Low_complexity Low_complexity 1 21 0 3 1082 213 355 45 61 chr17 65261510 65261642 -30011009 + L2c LINE L2 3246 3375 -12 3 1082 270 0 0 0 chr17 65261646 65261676 -30010975 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 1082 210 71 0 0 chr17 65265417 65265445 -30007206 + (T)n Simple_repeat Simple_repeat 1 28 0 3 1082 412 320 57 42 chr17 65266649 65266861 -30005790 - MIR SINE MIR -42 220 6 3 1082 240 143 0 0 chr17 65268106 65268148 -30004503 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 3 1082 280 322 93 62 chr17 65268402 65268564 -30004087 + MER20 DNA MER1_type 1 167 -52 3 1082 216 0 0 0 chr17 65269557 65269581 -30003070 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1082 320 210 20 20 chr17 65270328 65270430 -30002221 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 3 1082 356 0 23 0 chr17 65272355 65272399 -30000252 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1082 192 77 0 0 chr17 65273473 65273499 -29999152 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 1083 625 98 32 0 chr17 65275342 65275465 -29997186 + (TCTG)n Simple_repeat Simple_repeat 2 128 0 3 1083 333 0 0 0 chr17 65275482 65275519 -29997132 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1083 363 329 0 2 chr17 65275674 65275808 -29996843 - Lx9 LINE L1 -594 7050 6804 3 1083 474 196 128 0 chr17 65275790 65275892 -29996759 - Lx9 LINE L1 -725 6919 6805 3 1083 249 219 142 58 chr17 65275918 65276073 -29996578 + Lx9 LINE L1 7477 7644 0 3 1083 2065 18 0 0 chr17 65276082 65276311 -29996340 + L1Md_T LINE L1 5358 5586 -297 3 1083 9035 31 0 0 chr17 65276311 65277307 -29995344 + L1Md_T LINE L1 5587 6582 0 3 1083 1325 27 0 0 chr17 65277321 65277468 -29995183 + B1_Mm SINE Alu 1 147 0 3 1083 554 299 61 32 chr17 65278445 65278756 -29993895 - L1MB1 LINE L1 -2483 3657 3338 3 1083 276 305 94 0 chr17 65278757 65278885 -29993766 + L1MB1 LINE L1 3640 3779 -2361 3 1083 1064 294 50 71 chr17 65278886 65279110 -29993541 + L1MB1 LINE L1 5524 5767 -401 3 1083 270 0 0 0 chr17 65279110 65279140 -29993511 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 1083 1064 294 50 71 chr17 65279140 65279531 -29993120 + L1MB1 LINE L1 5768 6126 -42 3 1083 21 57 0 0 chr17 65279910 65279945 -29992706 + AT_rich Low_complexity Low_complexity 1 35 0 3 1083 23 0 0 0 chr17 65281521 65281544 -29991107 + AT_rich Low_complexity Low_complexity 1 23 0 3 1083 200 211 0 0 chr17 65282827 65282865 -29989786 + (TATG)n Simple_repeat Simple_repeat 4 41 0 3 1083 387 127 0 0 chr17 65283281 65283344 -29989307 + (TG)n Simple_repeat Simple_repeat 1 63 0 3 1083 21 0 0 0 chr17 65285468 65285489 -29987162 + AT_rich Low_complexity Low_complexity 1 21 0 3 1083 6013 190 74 24 chr17 65287770 65289038 -29983613 - Lx9 LINE L1 -8 7636 6306 3 1083 533 183 87 30 chr17 65289162 65289329 -29983322 + Lx4B LINE L1 6773 6995 -63 3 1083 789 133 0 0 chr17 65289377 65289535 -29983116 + (TC)n Simple_repeat Simple_repeat 2 159 0 3 1083 387 0 0 0 chr17 65289535 65289578 -29983073 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 1083 746 181 79 7 chr17 65289615 65289754 -29982897 - B1_Mur4 SINE Alu -1 149 1 3 1083 768 99 0 0 chr17 65289791 65289902 -29982749 + (TTTC)n Simple_repeat Simple_repeat 2 112 0 3 1083 283 0 47 23 chr17 65289906 65289949 -29982702 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 3 1083 1144 87 0 0 chr17 65289949 65290087 -29982564 - B1_Mus1 SINE Alu -9 139 2 3 1083 213 39 0 0 chr17 65290087 65290113 -29982538 + (TTTTC)n Simple_repeat Simple_repeat 2 27 0 3 1083 237 111 18 36 chr17 65290115 65290171 -29982480 - L1_Rod LINE L1 -621 5226 5172 3 1083 888 166 36 68 chr17 65290171 65290391 -29982260 - ORR1C2 LTR MaLR 0 384 172 3 1083 203 300 0 0 chr17 65290410 65290460 -29982191 + GA-rich Low_complexity Low_complexity 4 53 0 3 1083 804 194 62 22 chr17 65290460 65290639 -29982012 - ORR1C2 LTR MaLR -188 186 1 3 1083 1251 187 8 23 chr17 65290640 65290897 -29981754 - L1_Rod LINE L1 -672 5175 4923 3 1083 1067 134 221 135 chr17 65290897 65291200 -29981451 - RMER19C LTR ERVK -256 355 27 3 1083 540 0 0 0 chr17 65291201 65291261 -29981390 + (CAAAC)n Simple_repeat Simple_repeat 2 61 0 3 1083 1294 215 24 37 chr17 65291273 65291601 -29981050 - L1_Rod LINE L1 -996 4851 4528 3 1083 245 330 0 0 chr17 65291729 65291823 -29980828 - L1MD3 LINE L1 -179 7816 7723 3 1083 391 329 34 29 chr17 65292028 65292203 -29980448 - Lx8 LINE L1 -292 7181 7006 3 1083 3530 221 63 6 chr17 65292214 65293346 -29979305 - RMER1A Other Other 0 1066 18 3 1083 677 273 17 17 chr17 65293349 65293524 -29979127 - RMER1A Other Other -787 243 69 3 1083 294 188 62 0 chr17 65293526 65293590 -29979061 - RMER1B Other Other -953 113 46 3 1083 188 295 16 16 chr17 65294498 65294560 -29978091 - MIRc SINE MIR -115 153 92 3 1083 216 0 0 0 chr17 65295303 65295327 -29977324 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1083 977 302 99 19 chr17 65296304 65296770 -29975881 + Lx8 LINE L1 6305 6807 -666 3 1083 181 250 155 39 chr17 65296900 65297029 -29975622 + MIRb SINE MIR 4 147 -121 4 1083 21 57 0 0 chr17 65297029 65297064 -29975587 + AT_rich Low_complexity Low_complexity 1 35 0 4 1083 209 33 0 32 chr17 65297194 65297225 -29975426 + (TTA)n Simple_repeat Simple_repeat 3 32 0 4 1083 299 292 34 0 chr17 65297288 65297377 -29975274 - L2a LINE L2 0 3426 3335 4 1083 396 0 0 0 chr17 65297572 65297616 -29975035 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1083 622 191 47 156 chr17 65298882 65299093 -29973558 + MTE2b LTR MaLR 1 188 -191 4 1083 2318 158 70 129 chr17 65299093 65299652 -29972999 - RLTR11A2 LTR ERVK 0 527 2 4 1083 677 278 6 34 chr17 65299653 65299832 -29972819 - MYSERV16_I-int LTR ERVK -1349 977 804 4 1083 553 265 20 13 chr17 65299850 65300003 -29972648 + MTE2b LTR MaLR 196 349 -30 4 1083 258 136 0 0 chr17 65300003 65300047 -29972604 + (T)n Simple_repeat Simple_repeat 1 44 0 4 1083 469 135 22 0 chr17 65300651 65300740 -29971911 + CT-rich Low_complexity Low_complexity 2 92 0 4 1083 288 342 69 44 chr17 65300786 65300945 -29971706 + MIR SINE MIR 25 187 -75 4 1083 336 24 0 0 chr17 65301112 65301153 -29971498 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1083 260 341 24 0 chr17 65301633 65301715 -29970936 + MER5A DNA MER1_type 20 103 -86 4 1083 789 161 0 27 chr17 65303004 65303189 -29969462 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 1083 484 275 53 58 chr17 65303442 65303631 -29969020 + RMER15 LTR ERVL 275 462 -113 4 1083 554 213 24 16 chr17 65303985 65304109 -29968542 + RMER15 LTR ERVL 451 575 0 4 1083 203 39 36 73 chr17 65304233 65304288 -29968363 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 4 1083 354 243 83 50 chr17 65304291 65304418 -29968233 + MIRc SINE MIR 58 191 -77 4 1083 331 236 182 36 chr17 65304910 65305020 -29967631 + RSINE1 SINE B4 6 131 -34 4 1083 185 232 0 14 chr17 65307946 65308016 -29964635 + CT-rich Low_complexity Low_complexity 1 69 0 4 1083 711 246 100 89 chr17 65308066 65308325 -29964326 - B4A SINE B4 -22 270 9 4 1083 454 297 28 21 chr17 65308352 65308493 -29964158 - B3A SINE B2 -48 150 9 4 1083 288 0 0 0 chr17 65308824 65308856 -29963795 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1083 822 233 0 47 chr17 65308856 65309027 -29963624 - B3A SINE B2 -33 165 3 4 1083 275 45 0 43 chr17 65309582 65309628 -29963023 + (TCTCTG)n Simple_repeat Simple_repeat 4 47 0 4 1083 250 229 0 0 chr17 65309628 65309676 -29962975 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1083 312 152 0 0 chr17 65309872 65309938 -29962713 + GA-rich Low_complexity Low_complexity 2 67 0 4 1083 287 326 58 52 chr17 65310838 65311029 -29961622 + MLT1F LTR MaLR 306 497 -51 4 1083 334 300 44 37 chr17 65311051 65311186 -29961465 + ERVL-E-int LTR ERVL 4075 4210 -1275 4 1083 478 287 75 41 chr17 65311387 65311610 -29961041 - MLT1E1A LTR MaLR -7 673 375 4 1083 528 379 39 23 chr17 65311856 65312294 -29960357 + ERVL-E-int LTR ERVL 4389 4833 -834 4 1083 479 174 25 0 chr17 65312294 65312393 -29960258 + B1_Mur4 SINE Alu 30 142 -8 4 1083 272 320 31 0 chr17 65312663 65312760 -29959891 + ID_B1 SINE B4 61 160 -64 4 1083 1529 237 56 36 chr17 65313062 65313473 -29959178 + MTD LTR MaLR 1 419 0 4 1083 261 269 117 11 chr17 65314043 65314137 -29958514 + RMER15 LTR ERVL 418 521 -54 4 1083 422 190 38 0 chr17 65314174 65314253 -29958398 + MTE-int LTR MaLR 553 634 -946 4 1083 412 327 62 50 chr17 65314259 65314420 -29958231 + MTE-int LTR MaLR 751 913 -667 4 1083 268 158 86 17 chr17 65314872 65314930 -29957721 + Lx7 LINE L1 6745 6806 -890 4 1083 2705 251 16 17 chr17 65314958 65315592 -29957059 + Lx7 LINE L1 6781 7413 -283 4 1083 537 144 0 0 chr17 65315621 65315711 -29956940 + (TG)n Simple_repeat Simple_repeat 2 91 0 4 1083 1161 281 44 43 chr17 65315735 65316220 -29956431 - MTEb-int LTR MaLR -1066 514 3 4 1083 2538 39 116 0 chr17 65316226 65316536 -29956115 + ORR1A1 LTR MaLR 1 346 0 4 1083 1325 281 24 8 chr17 65316539 65316912 -29955739 - MTEb LTR MaLR 0 379 1 4 1083 1022 266 76 3 chr17 65317094 65317384 -29955267 + MTE2b LTR MaLR 69 379 0 4 1083 241 294 32 40 chr17 65317415 65317539 -29955112 + L1MD LINE L1 5119 5241 -905 4 1083 814 333 32 29 chr17 65318382 65318691 -29953960 - MTE2b LTR MaLR -12 367 58 4 1083 253 286 0 0 chr17 65318998 65319061 -29953590 - MER20 DNA MER1_type -65 154 92 4 1083 242 323 91 15 chr17 65319089 65319221 -29953430 + MLT1D LTR MaLR 77 218 -287 4 1083 1581 204 96 27 chr17 65319235 65319305 -29953346 + Lx7 LINE L1 6982 7051 -645 4 1083 513 0 0 0 chr17 65319305 65319362 -29953289 + (TC)n Simple_repeat Simple_repeat 1 57 0 4 1083 1581 204 96 27 chr17 65319362 65319698 -29952953 + Lx7 LINE L1 7052 7416 -280 4 1083 2128 59 100 0 chr17 65319796 65320112 -29952539 - L1_Mus1 LINE L1 0 6567 6271 4 1083 837 57 0 0 chr17 65320500 65320605 -29952046 + B1_Mus2 SINE Alu 37 141 -6 4 1083 3335 26 13 10 chr17 65320608 65320996 -29951655 + L1Md_F2 LINE L1 6192 6580 -2 4 1083 310 309 69 61 chr17 65321493 65321724 -29950927 - L1MEe LINE L1 -3875 979 747 4 1083 495 276 0 49 chr17 65321995 65322159 -29950492 - Lx9 LINE L1 -397 7247 7092 4 1083 3112 179 63 20 chr17 65322163 65322751 -29949900 + RLTR17 LTR ERVK 1 613 -79 4 1083 303 287 21 31 chr17 65322920 65323017 -29949634 + Lx9 LINE L1 7361 7456 -188 4 1083 267 31 0 0 chr17 65323052 65323084 -29949567 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1083 495 0 0 0 chr17 65324373 65324428 -29948223 + (TC)n Simple_repeat Simple_repeat 1 55 0 4 1083 1316 105 35 26 chr17 65324458 65324684 -29947967 - Lx LINE L1 0 6654 6427 4 1083 4856 113 8 3 chr17 65324682 65325393 -29947258 - Lx2 LINE L1 -352 6645 5931 4 1083 393 280 181 39 chr17 65325778 65326060 -29946591 - RMER15 LTR ERVL -2 573 252 4 1083 423 92 0 0 chr17 65327135 65327200 -29945451 + (TA)n Simple_repeat Simple_repeat 1 65 0 4 1083 379 191 177 38 chr17 65328693 65328851 -29943800 - Lx9 LINE L1 0 7644 7465 4 1083 3728 47 2 0 chr17 65328851 65329274 -29943377 + L1_Mus1 LINE L1 6144 6567 0 4 1083 1941 199 46 48 chr17 65329477 65329759 -29942892 - Lx9 LINE L1 -172 7472 7198 4 1083 3425 106 31 39 chr17 65329759 65330277 -29942374 - Lx LINE L1 -4 6650 6137 4 1083 1941 199 46 48 chr17 65330277 65330470 -29942181 - Lx9 LINE L1 -447 7197 6998 4 1083 1786 187 52 0 chr17 65330468 65330794 -29941857 + Lx9 LINE L1 6649 6991 -653 4 1083 922 303 95 42 chr17 65331059 65331205 -29941446 - Lx9 LINE L1 -8 7636 7493 4 1083 288 0 0 0 chr17 65331205 65331237 -29941414 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1083 922 303 95 42 chr17 65331237 65331731 -29940920 - Lx9 LINE L1 -152 7492 6962 4 1083 726 162 0 39 chr17 65333187 65333341 -29939310 - L1_Mur2 LINE L1 -913 4964 4817 4 1083 254 88 0 0 chr17 65333361 65333395 -29939256 + U2 snRNA snRNA 1 34 -154 4 1083 787 196 231 4 chr17 65333667 65333909 -29938742 - MTC LTR MaLR 0 421 125 4 1083 290 67 22 0 chr17 65333921 65333966 -29938685 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1083 390 314 107 70 chr17 65334220 65334792 -29937859 - L1ME1 LINE L1 -331 5848 5256 4 1083 198 0 0 0 chr17 65335425 65335447 -29937204 + (T)n Simple_repeat Simple_repeat 1 22 0 4 1083 4306 46 0 0 chr17 65336110 65336657 -29935994 + L1Md_F2 LINE L1 5040 5586 -297 4 1083 8160 44 1 0 chr17 65336657 65337635 -29935016 + L1Md_F2 LINE L1 5587 6565 -17 4 1083 207 0 0 0 chr17 65337638 65337661 -29934990 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 4 1083 29 28 0 0 chr17 65339487 65339523 -29933128 + AT_rich Low_complexity Low_complexity 1 36 0 4 1083 236 211 24 42 chr17 65339523 65339676 -29932975 + CT-rich Low_complexity Low_complexity 1 150 0 4 1083 904 236 51 25 chr17 65339687 65339883 -29932768 + B3 SINE B2 6 206 -10 4 1083 309 187 0 0 chr17 65339899 65339974 -29932677 + CT-rich Low_complexity Low_complexity 2 76 0 4 1083 2749 128 49 70 chr17 65341810 65342234 -29930417 - RLTR28 LTR ERVL -7 517 83 4 1083 3083 56 13 3 chr17 65342234 65342626 -29930025 + MTA_Mm LTR MaLR 1 396 0 4 1083 2749 128 49 70 chr17 65342626 65342729 -29929922 - RLTR28 LTR ERVL -442 82 1 4 1083 728 299 81 47 chr17 65342734 65343032 -29929619 + MTE2a LTR MaLR 72 379 0 4 1083 286 340 0 0 chr17 65343322 65343425 -29929226 - MLT1E1 LTR MaLR -15 639 537 4 1083 1206 53 0 0 chr17 65343566 65343718 -29928933 - L1_Mus1 LINE L1 -314 6253 6102 4 1083 1253 84 73 0 chr17 65343718 65343896 -29928755 + L1_Mus1 LINE L1 6377 6567 0 4 1083 298 318 115 25 chr17 65344093 65344293 -29928358 + RMER15 LTR ERVL 357 574 -1 4 1083 249 33 0 0 chr17 65345053 65345083 -29927568 + (TGG)n Simple_repeat Simple_repeat 1 30 0 4 1083 257 293 74 15 chr17 65345387 65345522 -29927129 - L2 LINE L2 -773 2646 2504 4 1083 450 0 0 0 chr17 65345545 65345595 -29927056 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1083 219 340 104 0 chr17 65346141 65346247 -29926404 - L2 LINE L2 -1590 1829 1713 4 1083 584 180 0 8 chr17 65346261 65346384 -29926267 + GA-rich Low_complexity Low_complexity 1 122 0 4 1083 229 161 106 75 chr17 65346837 65346895 -29925756 + L1_Mur3 LINE L1 4572 4627 -1250 4 1083 291 54 0 0 chr17 65346895 65346932 -29925719 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1083 513 0 0 0 chr17 65346932 65346988 -29925663 + (GA)n Simple_repeat Simple_repeat 2 58 0 4 1083 229 161 106 75 chr17 65346988 65347022 -29925629 + L1_Mur3 LINE L1 4628 4667 -1210 4 1083 4608 97 26 9 chr17 65347200 65347863 -29924788 + RLTR33 LTR ERVK 5 678 0 4 1083 1304 224 9 41 chr17 65347863 65348208 -29924443 + L1_Mur3 LINE L1 4665 4998 -882 4 1083 378 74 0 0 chr17 65348210 65348264 -29924387 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 1083 759 78 0 0 chr17 65348384 65348487 -29924164 + (GAAA)n Simple_repeat Simple_repeat 4 106 0 4 1083 238 222 0 0 chr17 65348487 65348524 -29924127 + polypurine Low_complexity Low_complexity 1 37 0 4 1083 1247 84 6 0 chr17 65348524 65348702 -29923949 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 4 1083 1005 74 0 0 chr17 65349662 65349797 -29922854 + (GAAA)n Simple_repeat Simple_repeat 2 136 0 4 1083 431 191 44 0 chr17 65350548 65350781 -29921870 + (CA)n Simple_repeat Simple_repeat 1 243 0 4 1083 421 328 163 25 chr17 65351044 65351247 -29921404 + LTR41 LTR ERVL 1 231 -537 4 1083 233 214 0 0 chr17 65351540 65351582 -29921069 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1083 359 262 138 28 chr17 65351583 65351728 -29920923 - RSINE1 SINE B4 -2 163 3 4 1083 479 95 14 0 chr17 65352278 65352352 -29920299 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 4 1083 842 175 75 0 chr17 65352363 65352523 -29920128 - B3 SINE B2 -43 173 2 4 1083 261 0 0 0 chr17 65353503 65353532 -29919119 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1083 24 32 0 0 chr17 65353844 65353875 -29918776 + AT_rich Low_complexity Low_complexity 1 31 0 5 1083 349 272 7 23 chr17 65354342 65354442 -29918209 - L2c LINE L2 -26 3361 3246 5 1083 618 309 99 34 chr17 65355196 65355412 -29917239 + L1MB1 LINE L1 5498 5726 -442 5 1083 254 95 24 0 chr17 65355412 65355454 -29917197 + (ATTG)n Simple_repeat Simple_repeat 3 45 0 5 1083 618 309 99 34 chr17 65355454 65355710 -29916941 + L1MB1 LINE L1 5727 6001 -167 5 1083 541 57 28 37 chr17 65355842 65355951 -29916700 + (TTAGGG)n Simple_repeat Simple_repeat 4 111 0 5 1083 25 0 0 0 chr17 65356091 65356116 -29916535 + AT_rich Low_complexity Low_complexity 1 25 0 5 1083 456 269 75 35 chr17 65356121 65356294 -29916357 + MLT1C LTR MaLR 1 180 -287 5 1083 330 257 41 41 chr17 65358087 65358233 -29914418 - L1M1 LINE L1 -481 5822 5677 5 1083 305 174 0 14 chr17 65358483 65358553 -29914098 + (CATA)n Simple_repeat Simple_repeat 2 70 0 5 1083 225 318 87 81 chr17 65358670 65358855 -29913796 - RLTR41 LTR ERV1 -62 384 199 5 1083 2925 274 79 31 chr17 65359187 65360339 -29912312 + Lx9 LINE L1 6158 7364 -280 5 1083 1060 239 28 22 chr17 65360339 65360660 -29911991 + RLTR15 LTR ERVK 1 323 -36 5 1083 302 251 217 21 chr17 65360690 65360764 -29911887 + Lx9 LINE L1 7358 7429 -215 5 1083 392 67 0 16 chr17 65360764 65360825 -29911826 + (TA)n Simple_repeat Simple_repeat 1 60 0 5 1083 302 251 217 21 chr17 65360825 65360990 -29911661 + Lx9 LINE L1 7430 7644 0 5 1083 341 278 42 0 chr17 65362369 65362441 -29910210 - ID4_ SINE ID 0 83 9 5 1083 522 159 26 11 chr17 65362516 65362795 -29909856 + (TG)n Simple_repeat Simple_repeat 1 283 0 5 1083 444 293 352 25 chr17 65362824 65363029 -29909622 - B4A SINE B4 -20 272 1 5 1083 513 47 0 0 chr17 65363537 65363601 -29909050 + (TG)n Simple_repeat Simple_repeat 2 65 0 5 1083 477 325 113 81 chr17 65364779 65365187 -29907464 + LTR16A1 LTR ERVL 23 443 -13 5 1083 610 300 90 40 chr17 65366123 65366401 -29906250 - B4A SINE B4 0 292 1 5 1083 589 104 48 7 chr17 65366848 65366993 -29905658 + (CCCTAA)n Simple_repeat Simple_repeat 2 152 0 5 1083 298 285 6 3 chr17 65368394 65368520 -29904131 + L1MA4 LINE L1 5799 5932 -368 5 1083 29 28 0 0 chr17 65368572 65368608 -29904043 + AT_rich Low_complexity Low_complexity 1 36 0 5 1083 28 79 0 0 chr17 65368632 65368695 -29903956 + AT_rich Low_complexity Low_complexity 1 63 0 5 1083 227 386 95 48 chr17 65369330 65369477 -29903174 + MLT1H LTR MaLR 346 499 -50 5 1083 352 306 133 20 chr17 65369590 65369890 -29902761 + L1M4 LINE L1 4912 5245 -901 5 1083 1090 90 0 0 chr17 65369914 65370058 -29902593 + B1_Mus1 SINE Alu 5 148 0 5 1083 216 0 0 0 chr17 65370067 65370091 -29902560 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 5 1083 26 0 0 0 chr17 65370367 65370393 -29902258 + AT_rich Low_complexity Low_complexity 1 26 0 5 1083 802 213 142 0 chr17 65370402 65370585 -29902066 + B3 SINE B2 5 213 -3 5 1083 286 281 133 11 chr17 65370633 65370647 -29902004 + B4 SINE B4 69 93 -199 5 1083 393 192 107 0 chr17 65370647 65370733 -29901918 + PB1D9 SINE Alu 1 96 -53 5 1083 205 236 43 33 chr17 65370784 65370876 -29901775 + T-rich Low_complexity Low_complexity 2 94 0 5 1083 671 344 47 9 chr17 65371218 65371450 -29901201 + B4A SINE B4 38 278 -14 5 1083 252 242 0 16 chr17 65371469 65371532 -29901119 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 1083 414 294 61 34 chr17 65371598 65371746 -29900905 + MIR SINE MIR 47 198 -64 5 1083 410 334 120 19 chr17 65371921 65372229 -29900422 + MLT1A0 LTR MaLR 27 365 0 5 1083 467 151 11 0 chr17 65373815 65373908 -29898743 + (TA)n Simple_repeat Simple_repeat 2 95 0 5 1083 967 229 20 16 chr17 65374130 65374383 -29898268 - L1_Rod LINE L1 -1733 4114 3861 5 1083 336 204 66 54 chr17 65374381 65374547 -29898104 - L1_Rod LINE L1 -496 5351 5184 5 1083 338 182 57 49 chr17 65374579 65374723 -29897928 - L1_Rod LINE L1 -2352 3791 3624 5 1083 659 263 32 9 chr17 65374729 65374979 -29897672 - L1_Rod LINE L1 -3331 2812 2559 5 1083 685 281 119 117 chr17 65374979 65375148 -29897503 + MT2B LTR ERVL 4 154 -379 5 1083 183 42 0 0 chr17 65375148 65375172 -29897479 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 5 1083 685 281 119 117 chr17 65375172 65375212 -29897439 + MT2B LTR ERVL 155 209 -324 5 1083 369 0 0 0 chr17 65375220 65375261 -29897390 + (TTG)n Simple_repeat Simple_repeat 2 42 0 5 1083 1084 63 0 14 chr17 65375261 65375397 -29897254 - B1_Mm SINE Alu -8 139 5 5 1083 694 253 115 52 chr17 65375397 65375715 -29896936 + MT2B LTR ERVL 210 601 0 5 1083 221 0 35 0 chr17 65375897 65375926 -29896725 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 5 1083 1418 206 110 6 chr17 65376321 65376508 -29896143 + ORR1D1 LTR MaLR 6 212 -162 5 1083 186 43 0 0 chr17 65376508 65376531 -29896120 + (TC)n Simple_repeat Simple_repeat 1 23 0 5 1083 195 42 0 0 chr17 65376531 65376555 -29896096 + (TTA)n Simple_repeat Simple_repeat 2 25 0 5 1083 1418 204 115 6 chr17 65376555 65376692 -29895959 + ORR1D1 LTR MaLR 213 356 -18 5 1083 5911 197 42 68 chr17 65376692 65377812 -29894839 + ORR1D1-int LTR MaLR 1 1089 -281 5 1083 2903 94 17 0 chr17 65377812 65377902 -29894749 + BGLII LTR ERVK 1 90 -331 5 1083 189 0 0 0 chr17 65377902 65377923 -29894728 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 5 1083 2903 94 17 0 chr17 65377923 65378246 -29894405 + BGLII LTR ERVK 91 420 -1 5 1083 5911 197 42 68 chr17 65378246 65378531 -29894120 + ORR1D1-int LTR MaLR 1090 1370 0 5 1083 1812 176 62 17 chr17 65378531 65378889 -29893762 + ORR1D1 LTR MaLR 1 374 0 5 1083 258 287 20 0 chr17 65379713 65379814 -29892837 - L1MC LINE L1 -2080 5802 5700 5 1083 234 264 0 0 chr17 65380653 65380706 -29891945 + T-rich Low_complexity Low_complexity 3 55 0 5 1083 208 361 0 0 chr17 65381265 65381348 -29891303 - MIR SINE MIR -39 223 141 5 1083 259 227 61 0 chr17 65382523 65382589 -29890062 + L1MA4 LINE L1 4667 4736 -1407 5 1083 977 269 30 8 chr17 65382573 65382937 -29889714 - L1_Mur3 LINE L1 -585 5295 4924 5 1083 845 296 83 16 chr17 65382935 65383492 -29889159 + L1MA4 LINE L1 4734 5326 -814 5 1083 564 340 74 74 chr17 65383501 65383838 -29888813 + ORR1E LTR MaLR 6 342 -17 5 1083 268 209 152 3 chr17 65383853 65383984 -29888667 + L1MA4 LINE L1 5334 5486 -703 5 1083 960 260 135 28 chr17 65384094 65384692 -29887959 + L1MA4 LINE L1 5476 6144 -147 5 1083 481 269 16 18 chr17 65385746 65385867 -29886784 + PB1 SINE Alu 3 115 -5 5 1083 259 238 0 31 chr17 65386535 65386600 -29886051 + MTC LTR MaLR 359 421 0 5 1083 470 61 15 0 chr17 65387752 65387818 -29884833 + (TTTTC)n Simple_repeat Simple_repeat 4 70 0 5 1083 229 229 53 79 chr17 65387826 65387902 -29884749 + MLT1K LTR MaLR 476 549 -46 5 1083 254 278 64 64 chr17 65388676 65388849 -29883802 + L1MD LINE L1 3680 3852 -2294 5 1083 1213 193 9 39 chr17 65388979 65389211 -29883440 - URR1B DNA MER1_type 0 225 1 5 1083 211 239 43 50 chr17 65389610 65389751 -29882900 + (TATAG)n Simple_repeat Simple_repeat 3 142 0 5 1083 543 69 0 0 chr17 65391212 65391284 -29881367 + (TG)n Simple_repeat Simple_repeat 1 72 0 5 1083 2904 295 89 49 chr17 65391459 65393165 -29879486 - Lx8 LINE L1 -359 7114 5299 5 1083 354 319 74 105 chr17 65393579 65393971 -29878680 - Lx8 LINE L1 -243 7230 6851 5 1083 2372 249 63 37 chr17 65393974 65394005 -29878646 - Lx8 LINE L1 -1777 4103 4073 5 1083 360 0 0 0 chr17 65394005 65394045 -29878606 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1083 2372 249 63 37 chr17 65394045 65394868 -29877783 - Lx8 LINE L1 -1808 4072 3228 5 1083 4611 179 29 49 chr17 65394883 65395825 -29876826 + MTC-int LTR MaLR 318 1240 -18 5 1083 2124 160 122 8 chr17 65395827 65396205 -29876446 + MTC LTR MaLR 1 421 0 5 1083 401 179 157 14 chr17 65396321 65396468 -29876183 - Lx9 LINE L1 0 7644 7477 5 1083 335 252 0 9 chr17 65396468 65396580 -29876071 + (CATATA)n Simple_repeat Simple_repeat 1 111 0 5 1083 804 283 72 18 chr17 65396601 65397022 -29875629 - Lx8 LINE L1 -3082 3061 2596 5 1083 300 318 145 39 chr17 65397052 65397389 -29875262 - L1_Rod LINE L1 -4251 1596 1224 5 1083 324 0 0 0 chr17 65397575 65397611 -29875040 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 1083 459 0 0 0 chr17 65398759 65398810 -29873841 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1083 1566 87 10 0 chr17 65401912 65402120 -29870531 - L1_Mus2 LINE L1 -1 6565 6356 5 1083 749 86 9 9 chr17 65402120 65402226 -29870425 + L1_Mus2 LINE L1 6267 6372 -194 5 1083 274 23 23 23 chr17 65402337 65402381 -29870270 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1083 257 246 15 0 chr17 65402435 65402500 -29870151 + (TATATG)n Simple_repeat Simple_repeat 6 71 0 5 1083 649 233 71 43 chr17 65403436 65403620 -29869031 - B3A SINE B2 -9 189 1 5 1083 256 250 35 23 chr17 65404098 65404184 -29868467 - Lx7 LINE L1 -19 7677 7591 5 1083 891 324 19 28 chr17 65404248 65404610 -29868041 - Lx7 LINE L1 -474 7222 6864 5 1084 354 23 0 0 chr17 65404937 65404980 -29867671 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1084 327 340 33 26 chr17 65406329 65406480 -29866171 - MIR SINE MIR -105 157 6 5 1084 805 255 19 14 chr17 65406586 65406801 -29865850 + B3 SINE B2 1 216 0 5 1084 576 93 0 0 chr17 65407110 65407185 -29865466 - L1Md_A LINE L1 -6141 583 509 5 1084 6105 25 12 1 chr17 65407187 65407867 -29864784 + L1Md_F3 LINE L1 5898 6584 0 5 1084 4959 237 60 70 chr17 65408987 65410546 -29862105 - Lx7 LINE L1 -2 7694 6178 5 1084 849 178 0 0 chr17 65410556 65410790 -29861861 + (TA)n Simple_repeat Simple_repeat 1 234 0 5 1084 991 236 140 34 chr17 65410794 65411152 -29861499 - Lx7 LINE L1 -1508 6188 5791 5 1084 306 0 0 0 chr17 65411152 65411186 -29861465 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 5 1084 230 303 10 48 chr17 65411186 65411213 -29861438 - Lx7 LINE L1 -88 5759 5737 5 1084 22 0 0 0 chr17 65411647 65411669 -29860982 + AT_rich Low_complexity Low_complexity 1 22 0 5 1084 7104 189 89 30 chr17 65412528 65414195 -29858456 - Lx7 LINE L1 -137 5743 3979 5 1084 2305 181 120 35 chr17 65414189 65414231 -29858420 - Lx7 LINE L1 -2455 3425 3375 5 1084 414 0 0 0 chr17 65414231 65414277 -29858374 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1084 2305 181 120 35 chr17 65414277 65414899 -29857752 - Lx7 LINE L1 -2506 3374 2705 5 1084 396 211 86 62 chr17 65414899 65415061 -29857590 + RLTR15 LTR ERVK 1 166 -193 5 1084 281 317 76 47 chr17 65415032 65415307 -29857344 + RLTR15 LTR ERVK 67 349 -10 5 1084 1974 185 8 3 chr17 65415312 65415669 -29856982 - Lx7 LINE L1 -3159 2721 2363 5 1084 515 286 54 35 chr17 65415890 65416186 -29856465 - Lx7 LINE L1 -6900 828 653 5 1084 258 81 0 0 chr17 65417086 65417123 -29855528 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1084 243 0 0 0 chr17 65417291 65417318 -29855333 + (CAGAGA)n Simple_repeat Simple_repeat 2 28 0 5 1084 644 276 77 74 chr17 65417736 65418064 -29854587 + RLTR12B LTR ERVK 1 298 -230 5 1084 9166 121 57 25 chr17 65418258 65420102 -29852549 - Lx2 LINE L1 -2 6995 5105 5 1084 822 170 16 6 chr17 65420109 65420339 -29852312 + ORR1C2 LTR MaLR 105 394 0 5 1084 821 144 0 7 chr17 65420429 65420569 -29852082 - ORR1D1 LTR MaLR -235 139 1 5 1084 189 0 0 0 chr17 65421411 65421432 -29851219 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 5 1084 661 250 0 0 chr17 65421435 65421571 -29851080 - B1_Mur2 SINE Alu -12 137 2 5 1084 261 247 62 110 chr17 65421759 65421968 -29850683 - Lx9 LINE L1 -35 7609 7411 5 1084 285 244 77 11 chr17 65422268 65422359 -29850292 - Lx9 LINE L1 -218 7426 7330 5 1084 1522 300 6 28 chr17 65422437 65422906 -29849745 - Lx9 LINE L1 -451 7193 6735 5 1084 4268 60 2 0 chr17 65423297 65423797 -29848854 + L1_Mus1 LINE L1 6067 6567 0 5 1084 24 0 0 0 chr17 65423878 65423902 -29848749 + AT_rich Low_complexity Low_complexity 1 24 0 5 1084 209 186 47 0 chr17 65425271 65425314 -29847337 + A-rich Low_complexity Low_complexity 3 47 0 6 1084 23 0 0 0 chr17 65425364 65425387 -29847264 + AT_rich Low_complexity Low_complexity 1 23 0 6 1084 346 289 0 0 chr17 65426803 65426886 -29845765 - B1_Mur1 SINE Alu 0 149 67 6 1084 770 64 0 9 chr17 65426892 65427002 -29845649 + (TTTC)n Simple_repeat Simple_repeat 2 110 0 6 1084 457 272 16 8 chr17 65427113 65427239 -29845412 + ORR1D1 LTR MaLR 1 127 -247 6 1084 231 36 0 0 chr17 65427475 65427503 -29845148 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 6 1084 279 0 0 0 chr17 65428107 65428138 -29844513 + (TC)n Simple_repeat Simple_repeat 2 32 0 6 1084 297 118 0 0 chr17 65428138 65428188 -29844463 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1084 349 286 56 62 chr17 65428642 65428821 -29843830 + RLTR23 LTR ERV1 253 430 0 6 1084 946 235 85 23 chr17 65428846 65429282 -29843369 + RLTR18B LTR ERVK 15 522 -94 6 1084 236 344 41 10 chr17 65429538 65429635 -29843016 + MLT1H1 LTR MaLR 382 481 -74 6 1084 423 376 117 30 chr17 65429803 65430272 -29842379 - MLT2F LTR ERVL -124 539 30 6 1084 2614 15 0 129 chr17 65432368 65432763 -29839888 - RLTR10 LTR ERVK -46 344 1 6 1084 8921 17 1 4 chr17 65432765 65433763 -29838888 - RLTR10-int LTR ERVK -3 1984 990 6 1084 374 271 31 8 chr17 65433845 65433975 -29838676 - RLTR10-int LTR ERVK -5987 1594 1462 6 1084 4242 58 3 2 chr17 65434039 65434923 -29837728 - RLTR10-int LTR ERVK -989 998 41 6 1084 38765 30 0 1 chr17 65434947 65441595 -29831056 - L1Md_T LINE L1 0 6585 1 6 1084 571 300 79 23 chr17 65442721 65442936 -29829715 + MamGypLTR1a LTR Gypsy 1 227 -557 6 1084 477 0 0 0 chr17 65443288 65443341 -29829310 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1084 5751 208 67 45 chr17 65443344 65445329 -29827322 - Lx9 LINE L1 -179 7465 5301 6 1084 983 203 66 0 chr17 65445652 65445864 -29826787 - URR1A DNA MER1_type 0 226 1 6 1084 315 0 0 0 chr17 65446386 65446421 -29826230 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1084 768 265 30 19 chr17 65446501 65446770 -29825881 - Lx7 LINE L1 -387 7309 7038 6 1084 360 0 0 0 chr17 65447943 65447983 -29824668 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1084 237 207 121 0 chr17 65449762 65449820 -29822831 + LTR16E2 LTR ERVL 502 566 -2 6 1084 594 41 0 0 chr17 65449981 65450054 -29822597 + (TC)n Simple_repeat Simple_repeat 2 74 0 6 1084 22 0 0 0 chr17 65450891 65450913 -29821738 + AT_rich Low_complexity Low_complexity 1 22 0 6 1084 306 0 0 0 chr17 65451082 65451116 -29821535 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 1084 396 0 0 0 chr17 65451444 65451488 -29821163 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1084 721 272 87 3 chr17 65451931 65452224 -29820427 - MTD LTR MaLR -14 405 27 6 1084 328 285 30 61 chr17 65452771 65452902 -29819749 - MER20 DNA MER1_type -2 217 91 6 1084 744 189 162 0 chr17 65452903 65453088 -29819563 - MTC LTR MaLR -7 414 200 6 1084 180 0 0 0 chr17 65453491 65453511 -29819140 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 6 1084 393 63 34 51 chr17 65453512 65453629 -29819022 + (TTTG)n Simple_repeat Simple_repeat 2 116 0 6 1084 1750 192 75 22 chr17 65453637 65454037 -29818614 - MTC LTR MaLR 0 421 1 6 1084 248 222 0 18 chr17 65454331 65454386 -29818265 - B1F SINE Alu 0 149 96 6 1084 28 71 0 0 chr17 65454431 65454487 -29818164 + AT_rich Low_complexity Low_complexity 1 56 0 6 1084 665 286 70 21 chr17 65454489 65454675 -29817976 - B3A SINE B2 -2 196 2 6 1084 287 271 39 16 chr17 65455963 65456125 -29816526 - L1M2 LINE L1 -463 5726 5558 6 1084 1318 289 83 17 chr17 65456346 65456948 -29815703 - Lx8 LINE L1 0 7473 6832 6 1084 481 281 18 0 chr17 65456951 65457065 -29815586 - Lx7 LINE L1 -994 6702 6587 6 1084 5311 165 20 72 chr17 65458953 65459685 -29812966 + RLTR21 LTR ERVK 1 683 -889 6 1084 2465 61 0 0 chr17 65459685 65459995 -29812656 + L1Md_F2 LINE L1 6261 6570 -12 6 1084 5311 165 20 72 chr17 65459995 65460382 -29812269 + RLTR21 LTR ERVK 684 1062 -510 6 1084 447 190 210 93 chr17 65460372 65460402 -29812249 + RMER12B LTR ERVK 1224 1251 -153 6 1084 390 115 0 0 chr17 65460402 65460463 -29812188 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 1084 447 190 210 93 chr17 65460463 65460594 -29812057 + RMER12B LTR ERVK 1252 1404 0 6 1084 192 77 0 0 chr17 65460599 65460625 -29812026 + (TCCCC)n Simple_repeat Simple_repeat 1 26 0 6 1084 1112 159 12 108 chr17 65460625 65460865 -29811786 - URR1B DNA MER1_type -8 217 1 6 1084 336 307 136 34 chr17 65461061 65461297 -29811354 + MLT1E3 LTR MaLR 1 260 -364 6 1084 242 243 148 14 chr17 65461449 65461576 -29811075 + MLT1E3 LTR MaLR 563 680 0 6 1084 822 303 54 33 chr17 65461644 65461975 -29810676 + MLT1A0 LTR MaLR 11 348 -17 6 1084 418 227 0 43 chr17 65462135 65462227 -29810424 - RSINE1 SINE B4 -67 98 11 6 1084 531 298 145 63 chr17 65462348 65462742 -29809909 - LTR16A LTR ERVL -18 433 8 6 1084 201 278 0 18 chr17 65463850 65463905 -29808746 + CT-rich Low_complexity Low_complexity 2 55 0 6 1084 347 339 24 0 chr17 65463905 65464029 -29808622 - B1F1 SINE Alu -21 128 2 6 1084 324 337 61 12 chr17 65465386 65465551 -29807100 - ERVL-B4-int LTR ERVL -2716 2998 2826 6 1084 547 304 116 54 chr17 65465691 65466045 -29806606 + MLT1A1 LTR MaLR 19 394 -14 6 1084 294 169 62 46 chr17 65466909 65467039 -29805612 - Lx6 LINE L1 -1 7459 7328 6 1084 640 64 11 11 chr17 65467789 65467884 -29804767 + (TCTA)n Simple_repeat Simple_repeat 2 96 0 6 1084 541 76 22 0 chr17 65467941 65468033 -29804618 + (GTTTG)n Simple_repeat Simple_repeat 2 95 0 6 1084 13983 166 163 33 chr17 65468127 65472044 -29800607 - Lx5 LINE L1 -8 7042 2910 6 1084 774 213 170 61 chr17 65472044 65472374 -29800277 - RLTR9A LTR ERVK 0 368 3 6 1084 13983 150 213 41 chr17 65472374 65473291 -29799360 - Lx5 LINE L1 -2968 2909 1533 6 1084 300 402 29 17 chr17 65473562 65473734 -29798917 + MLT1E2 LTR MaLR 13 186 -441 6 1084 242 0 61 0 chr17 65474050 65474083 -29798568 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1084 180 182 0 0 chr17 65474690 65474734 -29797917 + T-rich Low_complexity Low_complexity 1 44 0 6 1084 900 193 89 30 chr17 65475987 65476190 -29796461 - B3 SINE B2 -1 215 1 6 1084 579 29 0 0 chr17 65476237 65476306 -29796345 + (TC)n Simple_repeat Simple_repeat 1 69 0 6 1084 459 359 66 56 chr17 65476582 65476960 -29795691 + MLT1D LTR MaLR 116 497 -8 6 1084 206 347 31 31 chr17 65477691 65477789 -29794862 - MIRb SINE MIR -111 157 60 6 1084 180 0 0 0 chr17 65478496 65478516 -29794135 + (CA)n Simple_repeat Simple_repeat 2 21 0 6 1084 1251 231 206 28 chr17 65479181 65479652 -29792999 - Lx7 LINE L1 -813 6883 6329 6 1084 1769 148 40 64 chr17 65479666 65480071 -29792580 - L1_Mur3 LINE L1 -1455 4425 4031 6 1084 3817 75 18 2 chr17 65480052 65480597 -29792054 - L1_Mus4 LINE L1 -260 6376 5823 6 1084 4137 178 39 30 chr17 65480598 65481451 -29791200 + MTC-int LTR MaLR 399 1258 0 6 1084 1805 190 79 8 chr17 65481451 65481844 -29790807 + MTC LTR MaLR 1 421 0 6 1084 3308 115 77 7 chr17 65481856 65482572 -29790079 - L1_Mur3 LINE L1 -4012 1868 1108 6 1084 3051 208 126 51 chr17 65482576 65483459 -29789192 - RMER17B LTR ERVK -3 955 7 6 1084 3656 192 77 44 chr17 65483460 65484481 -29788170 - L1_Mur3 LINE L1 -6618 1094 40 6 1084 2471 169 337 78 chr17 65484597 65485437 -29787214 - L1_Mur3 LINE L1 -1561 4319 3144 6 1084 234 0 0 0 chr17 65485437 65485463 -29787188 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 1084 2471 169 337 78 chr17 65485463 65485771 -29786880 - L1_Mur3 LINE L1 -2737 3143 2874 6 1084 25090 32 183 7 chr17 65485802 65491224 -29781427 - L1Md_T LINE L1 0 6582 212 6 1084 3810 157 37 101 chr17 65491224 65491985 -29780666 - L1_Mur3 LINE L1 -2987 2893 2146 6 1084 448 96 0 0 chr17 65491985 65492068 -29780583 - L1Md_F2 LINE L1 0 6582 6500 6 1084 3810 157 37 101 chr17 65492068 65492326 -29780325 - L1_Mur3 LINE L1 -3735 2145 1939 6 1084 4067 204 19 2 chr17 65492319 65493174 -29779477 - L1_Mur3 LINE L1 -6559 1169 301 6 1084 2850 168 64 55 chr17 65494528 65495356 -29777295 - RMER6C LTR ERVK -7 713 1 6 1084 406 320 37 21 chr17 65496486 65496825 -29775826 + L1M5 LINE L1 2304 2651 -3495 6 1084 393 273 91 54 chr17 65496970 65497191 -29775460 + Lx8 LINE L1 7244 7472 -1 6 1084 234 0 0 0 chr17 65497283 65497309 -29775342 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 1084 1800 173 50 65 chr17 65497783 65498184 -29774467 - MTC LTR MaLR 0 421 27 6 1084 318 106 0 0 chr17 65498223 65498270 -29774381 + (TTA)n Simple_repeat Simple_repeat 1 47 0 6 1084 303 291 3 64 chr17 65498271 65498380 -29774271 - ID4_ SINE ID -48 104 2 6 1084 435 235 0 0 chr17 65498754 65498835 -29773816 + B3 SINE B2 50 130 -86 6 1084 404 263 81 22 chr17 65499011 65499147 -29773504 + RMER1C Other Other 1051 1194 -148 6 1084 349 341 30 12 chr17 65499209 65499375 -29773276 + L1MC LINE L1 2865 3033 -3113 6 1084 4094 104 3 10 chr17 65499386 65499999 -29772652 + L1Md_F LINE L1 87 695 -5824 6 1084 27629 70 4 1 chr17 65500000 65504059 -29768592 + L1Md_F2 LINE L1 682 4849 -1037 1 1084 2898 18 95 6 chr17 65504060 65504397 -29768254 - IAPLTR1_Mm LTR ERVK 0 367 1 2 1084 55128 32 15 3 chr17 65504397 65510796 -29761855 - IAPEz-int LTR ERVK 0 6481 8 2 1084 2925 15 95 6 chr17 65510796 65511133 -29761518 - IAPLTR1_Mm LTR ERVK 0 367 1 2 1084 5986 63 0 1 chr17 65511135 65511878 -29760773 + L1Md_F2 LINE L1 4848 5589 -297 1 1084 8662 44 1 4 chr17 65511878 65512876 -29759775 + L1Md_F2 LINE L1 5590 6584 -1 1 1084 433 270 191 33 chr17 65512889 65513372 -29759279 + L1MA4 LINE L1 3029 3587 -2556 3 1084 1206 365 30 8 chr17 65513377 65513976 -29758675 + Lx8 LINE L1 6704 7315 -158 4 1084 1644 318 119 42 chr17 65514121 65514327 -29758324 + L1MA4 LINE L1 3604 3827 -2316 3 1084 483 48 0 0 chr17 65514327 65514389 -29758262 + (CA)n Simple_repeat Simple_repeat 2 63 0 5 1084 1644 318 119 42 chr17 65514389 65515231 -29757420 + L1MA4 LINE L1 3828 4699 -1444 3 1084 189 0 0 0 chr17 65515231 65515252 -29757399 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 6 1084 1644 299 125 27 chr17 65515252 65516294 -29756357 + L1MA4 LINE L1 4668 5932 -368 3 1084 2367 103 143 8 chr17 65517230 65517600 -29755051 - RLTR9B2 LTR ERVK 0 420 1 7 1084 588 236 79 0 chr17 65518777 65518904 -29753747 + B1_Mur1 SINE Alu 3 139 -10 8 1084 468 0 0 0 chr17 65519454 65519506 -29753145 + (TG)n Simple_repeat Simple_repeat 1 52 0 9 1084 22 0 0 0 chr17 65519612 65519634 -29753017 + AT_rich Low_complexity Low_complexity 1 22 0 1 1084 2166 32 0 19 chr17 65521193 65521449 -29751202 - L1_Mus1 LINE L1 0 6567 6317 1 1084 405 0 0 0 chr17 65522197 65522242 -29750409 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 1 1084 289 293 116 36 chr17 65523178 65523316 -29749335 + MIRb SINE MIR 83 231 -37 1 1084 585 76 0 0 chr17 65527094 65527173 -29745478 + (TA)n Simple_repeat Simple_repeat 1 79 0 1 1084 224 302 198 0 chr17 65527647 65527743 -29744908 + L2c LINE L2 3272 3386 -1 1 1084 695 190 0 16 chr17 65528038 65528220 -29744431 + (TG)n Simple_repeat Simple_repeat 2 180 0 1 1084 621 273 163 12 chr17 65529386 65529631 -29743020 + MER31A LTR ERV1 184 465 -20 1 1084 202 394 47 12 chr17 65529747 65529919 -29742732 - L2c LINE L2 -4 3422 3245 1 1084 214 338 42 0 chr17 65529965 65530036 -29742615 - L2c LINE L2 -219 3168 3095 1 1084 333 0 0 0 chr17 65530292 65530329 -29742322 + (T)n Simple_repeat Simple_repeat 1 37 0 1 1084 426 214 11 43 chr17 65530329 65530422 -29742229 - B1_Mur2 SINE Alu 0 149 60 2 1084 886 150 54 6 chr17 65531230 65531398 -29741253 + ORR1C2 LTR MaLR 3 178 -206 2 1084 244 200 27 0 chr17 65531439 65531514 -29741137 + CT-rich Low_complexity Low_complexity 1 77 0 2 1084 917 220 94 5 chr17 65531524 65531716 -29740935 + ORR1C2 LTR MaLR 174 382 -2 2 1084 210 275 14 0 chr17 65532555 65532624 -29740027 + (TA)n Simple_repeat Simple_repeat 1 70 0 2 1084 315 49 0 0 chr17 65532904 65532945 -29739706 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1084 432 276 248 22 chr17 65532948 65533174 -29739477 - B4A SINE B4 -14 278 2 2 1084 189 0 0 0 chr17 65533609 65533630 -29739021 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 2 1084 21 0 0 0 chr17 65533960 65533981 -29738670 + AT_rich Low_complexity Low_complexity 1 21 0 2 1084 4832 175 30 29 chr17 65534385 65535280 -29737371 + Lx3C LINE L1 6077 6972 -4 2 1085 1188 106 0 0 chr17 65536090 65536269 -29736382 + (TCC)n Simple_repeat Simple_repeat 2 180 0 2 1085 266 225 12 0 chr17 65536279 65536359 -29736292 + CT-rich Low_complexity Low_complexity 2 82 0 3 1085 600 318 159 0 chr17 65536362 65536551 -29736100 - ID_B1 SINE B4 0 224 6 3 1085 713 318 34 7 chr17 65537251 65537546 -29735105 - Lx9 LINE L1 -283 7361 7059 3 1085 416 250 19 0 chr17 65537593 65537701 -29734950 - Lx6 LINE L1 -6 7454 7345 3 1085 1093 299 88 32 chr17 65537701 65538199 -29734452 - Lx9 LINE L1 -600 7044 6519 3 1085 2236 152 22 6 chr17 65538406 65538769 -29733882 - MTC LTR MaLR 0 421 53 3 1085 622 174 42 16 chr17 65538787 65539250 -29733401 + (TG)n Simple_repeat Simple_repeat 1 475 0 3 1085 688 256 158 36 chr17 65539264 65539511 -29733140 - B4A SINE B4 -8 284 8 3 1085 411 21 0 0 chr17 65541370 65541418 -29731233 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1085 247 241 0 49 chr17 65542672 65542733 -29729918 - MTC LTR MaLR -311 68 11 3 1085 1330 85 39 17 chr17 65543130 65543309 -29729342 + B2_Mm2 SINE B2 3 185 -10 3 1085 806 275 21 5 chr17 65543618 65543812 -29728839 + B4A SINE B4 9 205 -87 3 1085 765 300 119 24 chr17 65544055 65544465 -29728186 - L1MB7 LINE L1 -194 5990 5542 4 1085 917 264 102 34 chr17 65544452 65544950 -29727701 - L1MC LINE L1 -1201 4945 4414 4 1085 1761 249 176 29 chr17 65545154 65545303 -29727348 - Lx7 LINE L1 -1354 6342 6194 4 1085 363 121 0 0 chr17 65545303 65545361 -29727290 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 1085 1761 249 176 29 chr17 65545361 65545579 -29727072 - Lx7 LINE L1 -1503 6193 5870 4 1085 2795 64 3 0 chr17 65545579 65545905 -29726746 - ORR1A2 LTR MaLR 0 327 1 4 1085 6705 187 31 18 chr17 65545905 65547128 -29725523 - Lx7 LINE L1 -14 5866 4630 4 1085 198 0 0 0 chr17 65547128 65547150 -29725501 + (TG)n Simple_repeat Simple_repeat 2 23 0 4 1085 6705 187 31 18 chr17 65547150 65547298 -29725353 - Lx7 LINE L1 -1251 4629 4479 4 1085 1460 230 84 33 chr17 65547299 65547667 -29724984 - MTD LTR MaLR -14 405 19 4 1085 1241 279 83 72 chr17 65547698 65548284 -29724367 - MTD-int LTR MaLR 0 1098 571 4 1085 540 287 13 40 chr17 65548293 65548442 -29724209 + MTC-int LTR MaLR 404 548 -710 4 1085 1017 220 32 74 chr17 65548441 65548726 -29723925 + MTC-int LTR MaLR 9 281 -977 4 1085 552 312 23 12 chr17 65548711 65548883 -29723768 - MTD LTR MaLR -245 174 1 4 1085 680 212 81 6 chr17 65550314 65550475 -29722176 - L1_Mur3 LINE L1 -359 5521 5349 5 1085 1085 309 68 18 chr17 65550763 65551148 -29721503 - Lx9 LINE L1 -883 6761 6358 5 1085 22 56 0 0 chr17 65551234 65551270 -29721381 + AT_rich Low_complexity Low_complexity 1 36 0 5 1085 1120 180 17 75 chr17 65551513 65551753 -29720898 - URR1A DNA MER1_type 0 226 1 5 1085 35380 70 6 1 chr17 65552031 65558080 -29714571 - L1Md_F2 LINE L1 -3 6579 503 5 1085 231 114 0 0 chr17 65558076 65558111 -29714540 - L1Md_F2 LINE L1 -6393 223 189 5 1085 249 376 0 29 chr17 65558391 65558528 -29714123 - Lx8 LINE L1 -270 7203 7071 5 1085 2817 262 39 65 chr17 65558530 65559650 -29713001 + L1_Mur3 LINE L1 4149 5236 -644 5 1085 189 74 0 0 chr17 65559650 65559677 -29712974 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1085 2817 262 39 65 chr17 65559677 65559758 -29712893 + L1_Mur3 LINE L1 5237 5319 -561 5 1085 215 31 31 0 chr17 65559794 65559826 -29712825 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 5 1085 1082 89 0 0 chr17 65559826 65559961 -29712690 - B1_Mm SINE Alu -9 138 4 5 1085 3366 261 68 20 chr17 65560015 65560356 -29712295 + Lx9 LINE L1 6404 6782 -862 6 1085 1393 143 9 5 chr17 65560356 65560580 -29712071 + URR1B DNA MER1_type 1 225 0 6 1085 3366 261 68 20 chr17 65560580 65561394 -29711257 + Lx9 LINE L1 6783 7614 -30 6 1085 435 255 80 13 chr17 65561420 65561571 -29711080 + L1M2 LINE L1 5395 5555 -745 6 1085 327 301 4 129 chr17 65561602 65561827 -29710824 - Lx8 LINE L1 -2 7471 7275 6 1085 204 127 18 35 chr17 65561876 65561933 -29710718 + (TA)n Simple_repeat Simple_repeat 2 57 0 6 1085 505 314 79 57 chr17 65561944 65562016 -29710635 + Lx8 LINE L1 6255 6317 -1327 6 1085 456 35 0 0 chr17 65562016 65562074 -29710577 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 6 1085 983 259 114 37 chr17 65562074 65562323 -29710328 + Lx8 LINE L1 6172 6581 -1063 6 1085 2201 99 57 35 chr17 65562323 65562690 -29709961 - Lx2 LINE L1 -1 6996 6622 6 1085 983 259 115 36 chr17 65562690 65562800 -29709851 + Lx8 LINE L1 6443 6556 -917 6 1085 447 19 0 0 chr17 65563323 65563375 -29709276 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1085 342 0 0 0 chr17 65564072 65564110 -29708541 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1085 918 329 14 51 chr17 65564152 65564217 -29708434 - B4 SINE B4 -4 288 222 7 1085 258 105 0 0 chr17 65564217 65564255 -29708396 + (CTTA)n Simple_repeat Simple_repeat 2 39 0 7 1085 918 329 14 51 chr17 65564255 65564484 -29708167 - B4 SINE B4 -71 221 5 7 1085 544 196 131 14 chr17 65564707 65564852 -29707799 + B2_Mm2 SINE B2 27 188 -7 7 1085 897 78 62 0 chr17 65564874 65565003 -29707648 + B1_Mus2 SINE Alu 11 147 0 7 1085 277 123 17 17 chr17 65565512 65565570 -29707081 - L1MEc LINE L1 -3635 2684 2627 7 1085 461 193 45 9 chr17 65565672 65565782 -29706869 + MTC LTR MaLR 1 114 -307 7 1085 1193 237 12 28 chr17 65565782 65566108 -29706543 + Lx7 LINE L1 7015 7335 -361 7 1085 827 169 50 139 chr17 65566109 65566390 -29706261 + Lx7 LINE L1 7441 7696 0 7 1085 1864 201 27 8 chr17 65566425 65566792 -29705859 + MTC LTR MaLR 48 421 0 7 1085 558 294 189 22 chr17 65566817 65567350 -29705301 - L1MEc LINE L1 -3935 2465 1844 7 1085 198 0 0 0 chr17 65567759 65567781 -29704870 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 7 1085 1568 160 184 15 chr17 65567971 65568308 -29704343 + ORR1B1 LTR MaLR 1 394 0 7 1085 311 239 30 0 chr17 65568456 65568523 -29704128 + MLT1J LTR MaLR 67 135 -377 8 1085 213 149 0 21 chr17 65569204 65569252 -29703399 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 8 1085 300 243 46 55 chr17 65570380 65570489 -29702162 + PB1D10 SINE Alu 5 112 -5 8 1085 399 330 46 41 chr17 65570770 65570906 -29701745 + MLT1D LTR MaLR 20 160 -345 8 1085 6256 62 11 23 chr17 65570906 65571738 -29700913 - RLTR13B2 LTR ERVK 0 822 1 8 1085 399 330 46 41 chr17 65571738 65571797 -29700854 + MLT1D LTR MaLR 161 216 -289 8 1085 713 343 30 55 chr17 65571864 65572225 -29700426 - MLT1A0 LTR MaLR -13 352 1 8 1085 1297 87 38 0 chr17 65572562 65572745 -29699906 - B2_Mm2 SINE B2 -4 191 2 8 1085 894 287 58 11 chr17 65572921 65573196 -29699455 - B4A SINE B4 -4 288 1 8 1085 180 0 0 0 chr17 65573324 65573344 -29699307 + (TTG)n Simple_repeat Simple_repeat 2 21 0 8 1085 201 74 0 0 chr17 65574611 65574638 -29698013 + (GGGA)n Simple_repeat Simple_repeat 2 28 0 8 1085 180 0 0 0 chr17 65574656 65574676 -29697975 + (AATTG)n Simple_repeat Simple_repeat 2 21 0 9 1085 341 283 82 52 chr17 65575851 65576159 -29696492 - RMER20B LTR ERVK -68 448 126 9 1085 405 278 14 20 chr17 65576357 65576533 -29696118 + B3 SINE B2 3 176 -19 9 1085 820 144 79 0 chr17 65576546 65576685 -29695966 + B1_Mur4 SINE Alu 1 150 0 9 1085 475 111 0 0 chr17 65577616 65577697 -29694954 + L1_Mus3 LINE L1 6556 6636 -2 9 1085 23 0 0 0 chr17 65577717 65577740 -29694911 + AT_rich Low_complexity Low_complexity 1 23 0 9 1085 3490 52 15 0 chr17 65578256 65578716 -29693935 - L1Md_F2 LINE L1 -72 5811 5345 9 1085 5643 66 8 5 chr17 65578717 65579453 -29693198 + L1Md_F2 LINE L1 5845 6582 0 9 1085 778 171 27 0 chr17 65579949 65580095 -29692556 + B1_Mur4 SINE Alu 1 150 0 9 1085 243 0 0 0 chr17 65581231 65581258 -29691393 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 9 1085 618 14 0 0 chr17 65581258 65581328 -29691323 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 9 1085 330 263 126 0 chr17 65581722 65581838 -29690813 + L1_Mur3 LINE L1 5489 5651 -523 1 1085 433 332 40 14 chr17 65582050 65582328 -29690323 + L1MA4 LINE L1 5416 5700 -600 1 1085 613 282 0 34 chr17 65582374 65582521 -29690130 - RSINE1 SINE B4 -21 144 3 1 1085 438 302 46 63 chr17 65582526 65582571 -29690080 + L1MA4 LINE L1 5693 5736 -564 1 1085 1170 95 78 6 chr17 65582571 65582751 -29689900 + B2_Mm2 SINE B2 1 193 -2 1 1085 438 302 46 63 chr17 65582751 65582774 -29689877 + L1MA4 LINE L1 5737 5749 -551 1 1085 755 92 8 0 chr17 65582774 65582905 -29689746 + (TC)n Simple_repeat Simple_repeat 2 133 0 1 1085 495 33 0 0 chr17 65582905 65582965 -29689686 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 1085 438 302 46 63 chr17 65582965 65583131 -29689520 + L1MA4 LINE L1 5750 5924 -376 1 1085 338 284 109 9 chr17 65583361 65583471 -29689180 + PB1 SINE Alu 5 125 -2 1 1085 445 303 21 57 chr17 65583492 65583632 -29689019 + RSINE1 SINE B4 3 137 -28 1 1085 231 210 200 14 chr17 65583835 65583975 -29688676 + L1_Mur3 LINE L1 5654 5819 -625 1 1085 315 294 39 10 chr17 65584083 65584186 -29688465 + PB1D10 SINE Alu 2 107 -10 1 1085 3834 35 0 11 chr17 65584634 65585099 -29687552 - L1Md_F2 LINE L1 0 6582 6123 1 1085 1732 190 138 4 chr17 65585145 65585433 -29687218 + Lx9 LINE L1 7106 7418 -226 1 1085 387 0 0 0 chr17 65585433 65585476 -29687175 + (CATA)n Simple_repeat Simple_repeat 4 46 0 1 1085 1732 190 138 4 chr17 65585476 65585642 -29687009 + Lx9 LINE L1 7419 7620 -24 1 1085 638 256 22 22 chr17 65586940 65587120 -29685531 - B3A SINE B2 -18 180 1 1 1085 1331 262 66 8 chr17 65587877 65588408 -29684243 + L1MA5 LINE L1 5320 5882 -418 1 1085 225 154 0 0 chr17 65588537 65588576 -29684075 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 1085 993 204 167 47 chr17 65589531 65589896 -29682755 - RLTR9E LTR ERVK 0 409 1 1 1085 2981 31 3 3 chr17 65590040 65590399 -29682252 - L1_Mus1 LINE L1 0 6567 6209 1 1085 1131 323 67 9 chr17 65590880 65591314 -29681337 - Kanga1 DNA Tc2 -1266 479 21 1 1085 496 313 86 4 chr17 65592362 65592641 -29680010 - L1MB3 LINE L1 -182 6001 5700 1 1085 486 302 28 21 chr17 65592669 65592811 -29679840 - B1F SINE Alu -6 143 1 1 1085 29 0 0 0 chr17 65593694 65593723 -29678928 + AT_rich Low_complexity Low_complexity 1 29 0 1 1085 282 56 0 0 chr17 65593964 65594000 -29678651 + (A)n Simple_repeat Simple_repeat 1 36 0 1 1085 519 279 136 66 chr17 65594518 65594790 -29677861 - B4A SINE B4 0 292 2 1 1085 190 291 63 0 chr17 65595093 65595172 -29677479 + L2a LINE L2 3343 3426 0 1 1085 378 354 75 75 chr17 65595276 65595713 -29676938 - LTR81B LTR ERV1? -242 1151 713 1 1085 22 56 0 0 chr17 65596062 65596098 -29676553 + AT_rich Low_complexity Low_complexity 1 36 0 1 1085 207 100 0 0 chr17 65596184 65596214 -29676437 + (TAA)n Simple_repeat Simple_repeat 3 32 0 1 1085 192 125 0 0 chr17 65596761 65596793 -29675858 + (TTAA)n Simple_repeat Simple_repeat 4 35 0 1 1085 1001 249 113 20 chr17 65596844 65597303 -29675348 + Lx8 LINE L1 4215 4716 -1164 1 1085 2779 323 74 44 chr17 65598906 65601543 -29671108 + Lx8 LINE L1 4732 7473 0 1 1085 395 19 19 0 chr17 65602670 65602722 -29669929 + (TTTTTA)n Simple_repeat Simple_repeat 2 54 0 1 1085 237 296 92 15 chr17 65602853 65602969 -29669682 + LTR50 LTR ERVL 355 547 -248 1 1085 636 292 41 56 chr17 65603089 65603109 -29669542 + B3 SINE B2 1 20 -196 1 1085 1836 99 41 10 chr17 65603109 65603404 -29669247 + Lx LINE L1 6351 6654 0 1 1085 636 292 41 56 chr17 65603404 65603579 -29669072 + B3 SINE B2 21 193 -23 1 1085 229 105 0 0 chr17 65603586 65603624 -29669027 + LTR50 LTR ERVL 716 753 -42 1 1085 636 88 88 0 chr17 65606778 65606880 -29665771 + RLTR15 LTR ERVK 1 111 -248 1 1085 441 0 0 0 chr17 65606881 65606930 -29665721 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 1 1085 495 275 50 0 chr17 65607015 65607135 -29665516 + B1_Mur3 SINE Alu 18 143 -6 1 1085 3108 219 32 46 chr17 65607297 65608234 -29664417 + MYSERV-int LTR ERVK 1 1358 -1484 1 1085 244 322 86 9 chr17 65608239 65608355 -29664296 + RMER4A LTR ERVK 298 422 -44 1 1085 3516 210 84 23 chr17 65608355 65609458 -29663193 + MYSERV-int LTR ERVK 5375 6483 -67 1 1085 1490 152 111 6 chr17 65609516 65609841 -29662810 + RLTR15 LTR ERVK 1 359 0 1 1085 472 339 112 39 chr17 65610169 65610244 -29662407 - Lx8 LINE L1 -51 7422 7328 1 1085 3177 55 8 2 chr17 65610244 65610642 -29662009 + MTB LTR MaLR 1 400 0 1 1085 472 339 112 39 chr17 65610642 65610950 -29661701 - Lx8 LINE L1 -146 7327 7011 1 1085 26 0 0 0 chr17 65610950 65610976 -29661675 + AT_rich Low_complexity Low_complexity 1 26 0 1 1085 441 0 0 0 chr17 65611067 65611116 -29661535 + (TTA)n Simple_repeat Simple_repeat 2 50 0 1 1085 719 276 136 31 chr17 65611119 65611538 -29661113 - Lx9 LINE L1 -137 7507 7045 1 1085 913 312 147 14 chr17 65611610 65612045 -29660606 - Lx8 LINE L1 -556 6917 6425 1 1085 844 322 90 6 chr17 65612035 65612557 -29660094 - L1_Mur3 LINE L1 -351 5529 4964 1 1085 1514 279 105 28 chr17 65612575 65613558 -29659093 - L1_Mur3 LINE L1 -1788 4092 3034 1 1085 527 78 13 0 chr17 65613590 65613667 -29658984 + (TC)n Simple_repeat Simple_repeat 1 78 0 1 1085 596 330 42 9 chr17 65613780 65614110 -29658541 - L1_Rod LINE L1 -3347 2500 2160 1 1085 831 231 162 29 chr17 65614119 65614509 -29658142 + Lx9 LINE L1 7183 7624 -20 1 1085 23 33 0 0 chr17 65614833 65614863 -29657788 + AT_rich Low_complexity Low_complexity 1 30 0 1 1085 941 207 15 15 chr17 65615617 65615818 -29656833 + ORR1D1 LTR MaLR 1 201 -173 1 1085 1051 266 42 54 chr17 65615822 65616270 -29656381 + Lx6 LINE L1 5907 6349 -1111 1 1085 657 106 96 90 chr17 65616268 65616306 -29656345 + Lx LINE L1 6480 6518 -136 1 1085 195 42 0 0 chr17 65616306 65616330 -29656321 + (TGGG)n Simple_repeat Simple_repeat 2 25 0 1 1085 657 106 96 90 chr17 65616330 65616457 -29656194 + Lx LINE L1 6519 6645 -9 1 1085 743 285 35 35 chr17 65616457 65616697 -29655954 + ORR1D-int LTR MaLR 512 875 -705 1 1085 200 86 29 0 chr17 65617531 65617566 -29655085 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 1085 805 300 112 71 chr17 65618212 65618621 -29654030 + MER67D LTR ERV1 1 426 -88 1 1085 969 189 71 0 chr17 65620151 65620347 -29652304 - B3 SINE B2 -6 210 1 1 1085 663 78 0 0 chr17 65620510 65620600 -29652051 + (GGAA)n Simple_repeat Simple_repeat 3 92 0 1 1085 40 49 0 0 chr17 65620940 65621001 -29651650 + AT_rich Low_complexity Low_complexity 1 61 0 1 1085 216 0 0 0 chr17 65622282 65622306 -29650345 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1085 270 56 0 0 chr17 65624021 65624057 -29648594 + (TTGG)n Simple_repeat Simple_repeat 2 37 0 1 1085 645 334 181 15 chr17 65624668 65625136 -29647515 - MLT1F2 LTR MaLR -1 559 10 1 1085 267 318 78 22 chr17 65625372 65625552 -29647099 - L2 LINE L2 -562 2857 2668 1 1085 386 289 0 0 chr17 65625820 65625903 -29646748 - ID4_ SINE ID 0 83 1 1 1085 352 264 57 89 chr17 65626780 65626938 -29645713 + RMER15 LTR ERVL 423 575 0 1 1085 271 257 54 0 chr17 65627522 65627596 -29645055 + B1F SINE Alu 23 100 -49 1 1085 183 100 0 0 chr17 65627612 65627642 -29645009 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 1 1085 623 85 0 21 chr17 65627987 65628083 -29644568 + (GAGAA)n Simple_repeat Simple_repeat 2 95 0 1 1085 4857 161 26 24 chr17 65628088 65629036 -29643615 + L1_Mm LINE L1 4735 5684 -199 1 1085 7091 32 1 1 chr17 65629037 65629917 -29642734 - L1Md_T LINE L1 -12 6570 5691 1 1085 5905 103 55 14 chr17 65629917 65630862 -29641789 + Lx LINE L1 5671 6654 0 1 1085 708 154 0 0 chr17 65630862 65630985 -29641666 + GA-rich Low_complexity Low_complexity 2 124 0 1 1085 207 186 0 0 chr17 65631392 65631435 -29641216 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1085 23 68 0 0 chr17 65631692 65631736 -29640915 + AT_rich Low_complexity Low_complexity 1 44 0 1 1085 959 40 0 0 chr17 65633133 65633259 -29639392 + L1Md_A LINE L1 6457 6582 0 1 1085 355 308 132 25 chr17 65633678 65634161 -29638490 + L1ME1 LINE L1 2401 2935 -3211 1 1085 789 253 55 59 chr17 65634825 65635229 -29637422 + Lx7 LINE L1 7295 7696 0 1 1085 281 155 0 17 chr17 65635278 65635337 -29637314 + GA-rich Low_complexity Low_complexity 3 60 0 1 1085 719 338 78 50 chr17 65635341 65636092 -29636559 + L1MD LINE L1 4515 5290 -856 1 1085 488 328 108 47 chr17 65636092 65636636 -29636015 + L1ME1 LINE L1 5311 5884 -295 1 1085 624 38 0 0 chr17 65636638 65636717 -29635934 + (GGGA)n Simple_repeat Simple_repeat 4 82 0 1 1085 2966 43 3 0 chr17 65637037 65637406 -29635245 + L1Md_F2 LINE L1 6213 6582 0 1 1085 467 107 13 0 chr17 65637762 65637837 -29634814 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 1 1085 435 321 156 17 chr17 65637850 65638151 -29634500 - Lx8 LINE L1 -149 7324 6982 1 1085 21 0 0 0 chr17 65639528 65639549 -29633102 + AT_rich Low_complexity Low_complexity 1 21 0 1 1085 361 320 103 18 chr17 65639575 65639963 -29632688 + L1ME1 LINE L1 7226 7646 -396 1 1085 35147 31 2 7 chr17 65640230 65645433 -29627218 + L1Md_T LINE L1 416 5586 -297 1 1085 8379 34 1 1 chr17 65645433 65646428 -29626223 + L1Md_T LINE L1 5587 6581 -1 1 1085 225 400 60 25 chr17 65646919 65647119 -29625532 + L2a LINE L2 2979 3185 -241 1 1085 746 41 10 0 chr17 65647614 65647712 -29624939 + (TG)n Simple_repeat Simple_repeat 2 100 0 1 1085 306 169 25 25 chr17 65647740 65647861 -29624790 + (TCTA)n Simple_repeat Simple_repeat 4 124 0 1 1085 234 294 0 56 chr17 65648741 65648813 -29623838 - ID4 SINE ID -13 70 3 1 1085 256 274 5 0 chr17 65648900 65648967 -29623684 - PB1D10 SINE Alu -44 105 36 1 1085 23 33 0 0 chr17 65649807 65649837 -29622814 + AT_rich Low_complexity Low_complexity 1 30 0 1 1085 9414 192 40 34 chr17 65650276 65653813 -29618838 + Lx6 LINE L1 3816 7456 -4 1 1085 270 291 128 0 chr17 65654047 65654133 -29618518 - PB1 SINE Alu -7 120 24 1 1085 278 284 69 42 chr17 65654383 65654600 -29618051 + L1MEc LINE L1 1639 1861 -4539 1 1085 198 118 0 0 chr17 65654648 65654682 -29617969 + (A)n Simple_repeat Simple_repeat 1 34 0 1 1085 230 188 33 66 chr17 65654683 65654774 -29617877 + L1M1 LINE L1 5769 5856 -447 1 1085 210 91 0 0 chr17 65655638 65655671 -29616980 + (TAG)n Simple_repeat Simple_repeat 3 35 0 1 1085 232 311 32 5 chr17 65657507 65657612 -29615039 + B1F1 SINE Alu 7 117 0 1 1085 1184 269 21 21 chr17 65657803 65658088 -29614563 + B4A SINE B4 6 290 -2 1 1085 509 143 0 20 chr17 65658098 65658198 -29614453 + (CATA)n Simple_repeat Simple_repeat 1 98 0 1 1085 566 275 23 33 chr17 65658322 65658603 -29614048 + L1VL1 LINE L1 28 485 -5933 2 1085 269 266 119 0 chr17 65658620 65658729 -29613922 + L1_Mus1 LINE L1 681 802 -5814 2 1085 30355 99 6 10 chr17 65658738 65664674 -29607977 + L1_Mus1 LINE L1 725 6567 0 2 1085 23 68 0 0 chr17 65665748 65665792 -29606859 + AT_rich Low_complexity Low_complexity 1 44 0 2 1085 213 132 0 0 chr17 65666117 65666155 -29606496 + (A)n Simple_repeat Simple_repeat 1 38 0 2 1085 925 202 20 0 chr17 65666557 65666755 -29605896 - Lx9 LINE L1 -179 7465 7264 2 1086 216 0 0 0 chr17 65667906 65667930 -29604721 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 1086 37 23 0 0 chr17 65667978 65668022 -29604629 + AT_rich Low_complexity Low_complexity 1 44 0 2 1086 396 143 0 0 chr17 65668203 65668273 -29604378 + (CA)n Simple_repeat Simple_repeat 2 71 0 2 1086 198 0 0 0 chr17 65668724 65668746 -29603905 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1086 1111 255 141 15 chr17 65668812 65669138 -29603513 - ORR1D2 LTR MaLR -3 367 1 2 1086 34 55 0 0 chr17 65670375 65670430 -29602221 + AT_rich Low_complexity Low_complexity 1 55 0 2 1086 235 248 264 13 chr17 65671013 65671172 -29601479 + Lx9 LINE L1 7408 7606 -38 2 1086 281 308 119 36 chr17 65671623 65671842 -29600809 - L1ME3A LINE L1 -57 6116 5880 2 1086 573 208 0 0 chr17 65673184 65673352 -29599299 + (TG)n Simple_repeat Simple_repeat 1 168 0 2 1086 341 242 6 0 chr17 65673370 65673535 -29599116 + (TG)n Simple_repeat Simple_repeat 1 166 0 2 1086 287 152 14 96 chr17 65673540 65673613 -29599038 - L1M2 LINE L1 -524 5776 5710 2 1086 3118 35 3 0 chr17 65673642 65673987 -29598664 + ORR1A0 LTR MaLR 1 346 0 2 1086 486 242 182 27 chr17 65674685 65674872 -29597779 + B3 SINE B2 1 216 0 2 1086 594 281 125 50 chr17 65676170 65677296 -29595355 + L1M4 LINE L1 2133 3396 -2750 2 1086 812 170 6 0 chr17 65677354 65677513 -29595138 + GA-rich Low_complexity Low_complexity 4 163 0 2 1086 1242 249 88 29 chr17 65677532 65677953 -29594698 + Lx7 LINE L1 5587 6032 -1664 2 1086 2823 255 78 102 chr17 65677944 65679122 -29593529 + Lx7 LINE L1 6212 7361 -335 2 1086 259 121 0 33 chr17 65679126 65679186 -29593465 + T-rich Low_complexity Low_complexity 1 58 0 2 1086 354 80 0 0 chr17 65679631 65679681 -29592970 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1086 228 324 49 76 chr17 65679957 65680141 -29592510 + L1MC LINE L1 3739 3917 -2229 2 1086 243 0 0 0 chr17 65680141 65680168 -29592483 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1086 449 222 10 0 chr17 65680326 65680425 -29592226 + Lx6 LINE L1 7341 7440 -20 2 1086 36249 35 0 0 chr17 65680438 65686078 -29586573 + L1Md_T LINE L1 1 5589 -297 2 1086 9559 6 0 0 chr17 65686078 65687111 -29585540 + L1Md_T LINE L1 5590 6585 0 2 1086 22 0 0 0 chr17 65687215 65687237 -29585414 + AT_rich Low_complexity Low_complexity 1 22 0 2 1086 483 300 178 35 chr17 65687246 65687640 -29585011 + L1M4 LINE L1 4603 5052 -1094 2 1086 951 328 41 39 chr17 65689161 65689700 -29582951 - L1MA6 LINE L1 -244 6056 5517 2 1086 228 350 30 10 chr17 65689723 65689824 -29582827 - PB1D10 SINE Alu -1 116 14 2 1086 501 17 0 0 chr17 65689845 65689903 -29582748 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1086 260 244 37 0 chr17 65690095 65690177 -29582474 - L1MA6 LINE L1 -1017 5126 5042 2 1086 787 152 0 14 chr17 65690569 65690709 -29581942 + URR1B DNA MER1_type 86 223 -2 2 1086 430 279 60 36 chr17 65690922 65691089 -29581562 - MER5B DNA MER1_type -5 173 3 2 1086 22 35 0 0 chr17 65691481 65691510 -29581141 + AT_rich Low_complexity Low_complexity 1 29 0 2 1086 428 249 61 51 chr17 65692393 65692548 -29580103 + B3 SINE B2 47 189 -27 2 1086 215 125 0 24 chr17 65692592 65692633 -29580018 + (GGGGA)n Simple_repeat Simple_repeat 1 40 0 2 1086 4481 164 65 16 chr17 65692954 65693779 -29578872 - RMER19B LTR ERVK -12 890 25 2 1086 1262 99 32 21 chr17 65693933 65694119 -29578532 - B2_Mm2 SINE B2 -6 189 2 2 1086 1311 184 80 0 chr17 65694131 65694419 -29578232 - Lx9 LINE L1 -8 7636 7326 2 1086 1994 67 0 0 chr17 65694544 65694784 -29577867 + L1Md_T LINE L1 6343 6582 0 2 1086 384 250 68 9 chr17 65694786 65694929 -29577722 + L1MC4a LINE L1 6879 7036 -846 2 1086 12377 85 23 37 chr17 65695259 65697131 -29575520 - RLTR22_Mur LTR ERVK 0 1848 4 2 1086 1736 241 59 49 chr17 65697462 65698054 -29574597 - L1M2 LINE L1 -1782 4361 3764 2 1086 294 220 0 48 chr17 65698064 65698126 -29574525 + ID4 SINE ID 7 65 -18 2 1086 315 0 0 0 chr17 65698127 65698162 -29574489 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1086 253 289 70 87 chr17 65698168 65698467 -29574184 - L1M2 LINE L1 -2381 3762 3469 2 1086 282 179 0 0 chr17 65698486 65698542 -29574109 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1086 337 276 11 11 chr17 65698563 65698651 -29574000 - B4A SINE B4 -204 88 1 2 1086 565 321 110 3 chr17 65698651 65698979 -29573672 - L1M2 LINE L1 -2667 3476 3114 2 1086 461 229 34 27 chr17 65699267 65699415 -29573236 - L1M2 LINE L1 -3095 3048 2900 2 1086 303 28 0 0 chr17 65699594 65699630 -29573021 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1086 865 194 56 8 chr17 65699894 65700127 -29572524 - ORR1D1 LTR MaLR -125 253 1 2 1086 319 369 62 51 chr17 65700210 65700467 -29572184 + L1M5 LINE L1 2320 2579 -3567 2 1086 342 318 109 38 chr17 65700628 65700968 -29571683 + L1MC LINE L1 2774 3137 -3009 2 1086 2094 44 0 0 chr17 65702266 65702515 -29570136 + L1Md_F3 LINE L1 6023 6271 -313 2 1086 7882 55 10 4 chr17 65702779 65704207 -29568444 - L1Md_F2 LINE L1 -3 6579 5145 2 1086 252 235 0 42 chr17 65704654 65704725 -29567926 + RMER1C Other Other 1264 1331 -11 2 1086 1353 179 0 9 chr17 65705130 65705355 -29567296 + URR1B DNA MER1_type 3 225 0 2 1086 3411 58 0 17 chr17 65705795 65706198 -29566453 + MTA_Mm LTR MaLR 1 396 0 2 1086 1394 82 41 6 chr17 65706401 65706626 -29566025 + ORR1B2 LTR MaLR 1 242 -132 2 1086 594 216 170 42 chr17 65706651 65706892 -29565759 + RLTR10A LTR ERVK 140 411 0 2 1086 442 174 61 52 chr17 65706911 65707026 -29565625 + RLTR10-int LTR ERVK 318 433 -1554 2 1086 1458 290 32 16 chr17 65707293 65707881 -29564770 + MMERVK10C-int LTR ERVK 2689 3620 -3961 2 1086 294 186 27 41 chr17 65707899 65707972 -29564679 + MMERVK10C-int LTR ERVK 3791 3854 -3727 2 1086 1994 281 52 40 chr17 65708144 65710124 -29562527 + IAP-d-int LTR ERVK 3734 7040 -204 2 1086 189 0 0 0 chr17 65710124 65710145 -29562506 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 2 1086 781 243 103 50 chr17 65710145 65710174 -29562477 + IAP-d-int LTR ERVK 6788 6816 -5 2 1086 625 251 138 4 chr17 65710209 65710449 -29562202 + RLTR10A LTR ERVK 140 411 0 2 1086 1205 108 3 2 chr17 65710449 65710614 -29562037 + ORR1B2 LTR MaLR 226 391 -3 2 1086 21 0 0 0 chr17 65711172 65711193 -29561458 + AT_rich Low_complexity Low_complexity 1 21 0 2 1086 1380 188 33 0 chr17 65711600 65711871 -29560780 - Lx5 LINE L1 -3 7047 6768 2 1086 2098 153 80 51 chr17 65712203 65712615 -29560036 + Lx5 LINE L1 6349 6772 -278 2 1086 496 318 56 24 chr17 65712628 65712915 -29559736 - MLT2B4 LTR ERVL -260 296 1 2 1086 451 343 37 32 chr17 65713353 65713540 -29559111 - B4A SINE B4 -10 282 95 2 1086 777 236 0 0 chr17 65716034 65716182 -29556469 + B1_Mur2 SINE Alu 2 149 0 2 1086 916 278 62 33 chr17 65716190 65716786 -29555865 + Lx9 LINE L1 5780 6513 -1131 2 1086 271 338 21 7 chr17 65717385 65717528 -29555123 + (CATG)n Simple_repeat Simple_repeat 2 146 0 2 1086 4564 128 30 99 chr17 65717553 65717682 -29554969 - L1_Mur3 LINE L1 -3713 2167 2058 2 1086 294 73 0 0 chr17 65717682 65717723 -29554928 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1086 5314 144 39 62 chr17 65717723 65719500 -29553151 - L1_Mur3 LINE L1 -3823 2057 309 2 1086 210 323 46 46 chr17 65719936 65720111 -29552540 + L2 LINE L2 2353 2527 -892 2 1086 558 67 0 0 chr17 65720145 65720220 -29552431 + (TC)n Simple_repeat Simple_repeat 1 75 0 2 1086 742 274 159 46 chr17 65720408 65720954 -29551697 - L1MA6 LINE L1 -2 6298 5691 2 1086 324 246 0 41 chr17 65720976 65721099 -29551552 + (TA)n Simple_repeat Simple_repeat 2 119 0 2 1086 291 175 0 0 chr17 65721225 65721282 -29551369 + CT-rich Low_complexity Low_complexity 3 59 0 2 1086 1062 238 90 3 chr17 65722651 65722963 -29549688 + Lx9 LINE L1 7306 7644 0 2 1086 404 271 57 101 chr17 65722969 65723259 -29549392 + L1M2 LINE L1 5254 5532 -780 2 1086 831 185 34 87 chr17 65723259 65723466 -29549185 + B3A SINE B2 3 198 0 2 1086 404 288 105 47 chr17 65723466 65723624 -29549027 + L1M2 LINE L1 5533 5692 -620 2 1086 462 308 52 15 chr17 65723843 65723978 -29548673 + MTEa LTR MaLR 6 145 -234 2 1086 324 366 91 105 chr17 65723978 65724273 -29548378 + MT2A LTR ERVL 6 429 -104 2 1086 770 250 75 20 chr17 65724878 65725078 -29547573 - B3 SINE B2 -2 214 4 2 1086 279 239 107 77 chr17 65725089 65725179 -29547472 + Tigger7 DNA MER2_type 2283 2375 -116 2 1086 1113 224 244 3 chr17 65725179 65725294 -29547357 + MTD LTR MaLR 3 118 -301 2 1086 348 24 0 0 chr17 65725294 65725335 -29547316 + (ATTG)n Simple_repeat Simple_repeat 3 43 0 2 1086 1113 224 244 3 chr17 65725335 65725555 -29547096 + MTD LTR MaLR 119 418 -1 2 1086 279 239 107 77 chr17 65725555 65725632 -29547019 + Tigger7 DNA MER2_type 2376 2455 -36 2 1086 703 265 54 24 chr17 65725632 65725837 -29546814 + B3 SINE B2 1 211 -5 2 1086 925 302 102 23 chr17 65725920 65726726 -29545925 + L1MA5A LINE L1 5008 5875 -422 2 1086 2203 219 45 16 chr17 65727506 65727993 -29544658 - RMER1C Other Other 0 1342 842 2 1086 815 316 81 21 chr17 65728782 65729387 -29543264 - L1M3 LINE L1 -3167 2973 2333 2 1086 662 89 61 26 chr17 65729451 65729687 -29542964 + (TAGA)n Simple_repeat Simple_repeat 1 244 0 2 1086 292 279 78 35 chr17 65729689 65729804 -29542847 - RMER12 LTR ERVK -486 836 717 2 1086 21 36 0 0 chr17 65730929 65730957 -29541694 + AT_rich Low_complexity Low_complexity 1 28 0 2 1086 491 322 28 0 chr17 65732144 65732287 -29540364 + RSINE1 SINE B4 19 165 0 2 1086 23 0 0 0 chr17 65732339 65732362 -29540289 + AT_rich Low_complexity Low_complexity 1 23 0 2 1086 355 240 10 40 chr17 65732915 65733015 -29539636 + RSINE1 SINE B4 57 153 -12 2 1086 3773 171 79 20 chr17 65733022 65734423 -29538228 + Lx9 LINE L1 2135 2812 -3068 2 1086 225 414 36 0 chr17 65735694 65735834 -29536817 + MIRb SINE MIR 47 191 -77 2 1086 227 31 31 0 chr17 65736538 65736570 -29536081 + (CACCC)n Simple_repeat Simple_repeat 4 36 0 2 1086 776 299 75 43 chr17 65738181 65738461 -29534190 + MTE2a LTR MaLR 57 345 -34 3 1086 667 78 10 10 chr17 65739659 65739680 -29532971 + (GGA)n Simple_repeat Simple_repeat 2 22 0 3 1086 1133 113 6 0 chr17 65739680 65739857 -29532794 + (GAA)n Simple_repeat Simple_repeat 1 178 0 3 1086 667 78 10 10 chr17 65739857 65739939 -29532712 + (GGA)n Simple_repeat Simple_repeat 2 84 0 3 1086 2018 211 27 12 chr17 65740275 65740682 -29531969 - MTC LTR MaLR -8 413 1 3 1086 5235 201 39 78 chr17 65740684 65741978 -29530673 - MTC-int LTR MaLR -2 1256 13 3 1086 1125 118 35 105 chr17 65741990 65742110 -29530541 - MTC LTR MaLR -1 420 323 3 1086 2388 93 48 9 chr17 65742110 65742425 -29530226 - ORR1A2 LTR MaLR 0 327 1 3 1086 1125 146 33 101 chr17 65742425 65742571 -29530080 - MTC LTR MaLR -99 322 169 3 1086 330 325 79 24 chr17 65742855 65742981 -29529670 + ID_B1 SINE B4 82 214 -10 3 1086 320 321 136 46 chr17 65743082 65743446 -29529205 - MLT1H LTR MaLR -53 496 49 3 1086 1793 21 0 0 chr17 65744170 65744362 -29528289 + B2_Mm1a SINE B2 2 193 0 3 1086 791 182 0 0 chr17 65744369 65744490 -29528161 + B1_Mus1 SINE Alu 1 121 -27 3 1086 21 36 0 0 chr17 65744792 65744820 -29527831 + AT_rich Low_complexity Low_complexity 1 28 0 3 1086 953 266 104 104 chr17 65747197 65747620 -29525031 + RLTR23 LTR ERV1 8 430 0 3 1086 21 36 0 0 chr17 65747986 65748014 -29524637 + AT_rich Low_complexity Low_complexity 1 28 0 3 1086 21 0 0 0 chr17 65748074 65748095 -29524556 + AT_rich Low_complexity Low_complexity 1 21 0 3 1086 1687 42 5 0 chr17 65748782 65748973 -29523678 + B2_Mm1t SINE B2 2 193 0 3 1086 522 351 44 44 chr17 65749029 65749327 -29523324 - MT2A LTR ERVL -109 424 127 3 1086 3509 254 81 21 chr17 65749506 65749822 -29522829 - Lx9 LINE L1 -2 7642 7321 3 1086 423 0 0 0 chr17 65749822 65749869 -29522782 + (GTTTG)n Simple_repeat Simple_repeat 1 47 0 3 1086 3509 254 81 21 chr17 65749869 65750645 -29522006 - Lx9 LINE L1 -324 7320 6486 3 1086 1944 193 167 2 chr17 65751125 65751659 -29520992 + L1_Mur3 LINE L1 1225 1846 -4034 3 1086 228 67 0 0 chr17 65752371 65752401 -29520250 + (GGA)n Simple_repeat Simple_repeat 1 30 0 3 1086 856 186 7 7 chr17 65752885 65753031 -29519620 + B1_Mur2 SINE Alu 3 148 -1 3 1086 330 167 0 0 chr17 65753162 65753222 -29519429 + (CATA)n Simple_repeat Simple_repeat 1 60 0 3 1086 462 18 0 0 chr17 65753530 65753585 -29519066 + (GGGA)n Simple_repeat Simple_repeat 4 58 0 3 1086 1235 54 0 0 chr17 65755150 65755297 -29517354 - B1_Mus1 SINE Alu 0 148 2 3 1086 380 353 7 14 chr17 65755455 65755593 -29517058 - B3A SINE B2 -10 188 52 3 1086 459 235 83 42 chr17 65755717 65755837 -29516814 - ID_B1 SINE B4 -7 217 93 3 1086 735 224 146 11 chr17 65756083 65756268 -29516383 - URR1A DNA MER1_type -16 210 1 3 1086 423 38 0 0 chr17 65756344 65756397 -29516254 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 3 1086 183 80 0 0 chr17 65756402 65756427 -29516224 + (GA)n Simple_repeat Simple_repeat 1 25 0 3 1086 387 299 168 20 chr17 65756833 65757145 -29515506 - L1PB4 LINE L1 -242 5914 5558 3 1086 955 300 89 60 chr17 65757323 65758141 -29514510 - L1_Mur3 LINE L1 -3575 2305 1464 3 1086 6670 144 56 34 chr17 65758206 65759557 -29513094 - Lx4A LINE L1 -1 7057 5650 3 1086 7222 106 18 15 chr17 65759555 65760643 -29512008 - L1_Mur2 LINE L1 -608 5269 4179 3 1086 4548 112 58 4 chr17 65760646 65761852 -29510799 - L1_Mur2 LINE L1 -4023 1854 579 3 1086 243 276 95 38 chr17 65761872 65762083 -29510568 - L1M2 LINE L1 -4830 2019 1797 3 1086 333 155 0 0 chr17 65762920 65762978 -29509673 + A-rich Low_complexity Low_complexity 5 62 0 3 1086 2350 93 14 69 chr17 65763687 65764035 -29508616 + ORR1A4 LTR MaLR 1 329 0 3 1086 829 217 0 72 chr17 65764197 65764420 -29508231 + Lx2B LINE L1 6781 6987 -13 3 1086 552 295 30 37 chr17 65764446 65764580 -29508071 + RSINE1 SINE B4 2 134 -31 3 1086 563 26 88 0 chr17 65764585 65764699 -29507952 + (TC)n Simple_repeat Simple_repeat 1 124 0 3 1086 4014 30 5 0 chr17 65764738 65765172 -29507479 + RLTR10C LTR ERVK 1 436 0 3 1086 324 0 0 0 chr17 65765173 65765209 -29507442 + (CATA)n Simple_repeat Simple_repeat 2 37 0 3 1086 270 116 0 0 chr17 65765209 65765252 -29507399 + (GAAA)n Simple_repeat Simple_repeat 1 43 0 3 1086 708 352 88 18 chr17 65765299 65765695 -29506956 + MER77 LTR ERVL 180 603 -4 3 1086 219 114 0 0 chr17 65765901 65765936 -29506715 + (CATA)n Simple_repeat Simple_repeat 4 38 0 3 1086 1439 108 0 25 chr17 65767264 65767464 -29505187 + B2_Mm2 SINE B2 1 195 0 3 1086 588 262 16 47 chr17 65767863 65768066 -29504585 + B3 SINE B2 2 197 -1 3 1086 1735 168 39 86 chr17 65768245 65768629 -29504022 + ORR1D2 LTR MaLR 5 370 0 3 1086 850 335 132 24 chr17 65768733 65768852 -29503799 + Lx9 LINE L1 6045 6188 -1285 3 1086 994 89 6 6 chr17 65768852 65769022 -29503629 + (TG)n Simple_repeat Simple_repeat 2 171 0 3 1086 1185 276 215 47 chr17 65769022 65769823 -29502828 + Lx9 LINE L1 6189 7239 -405 3 1086 322 284 131 48 chr17 65769842 65770136 -29502515 + Lx9 LINE L1 7174 7641 -3 3 1086 609 226 93 33 chr17 65770177 65770328 -29502323 - B3A SINE B2 0 198 39 3 1086 480 308 181 37 chr17 65770463 65771083 -29501568 + L1M3 LINE L1 2864 3572 -2568 3 1086 1123 226 146 33 chr17 65771108 65771506 -29501145 + Lx9 LINE L1 7061 7503 -141 3 1086 271 227 206 0 chr17 65771686 65771783 -29500868 - ORR1D1 LTR MaLR -252 122 6 3 1086 285 293 43 43 chr17 65771788 65771927 -29500724 + L1M3 LINE L1 3741 3879 -2261 3 1086 355 275 123 51 chr17 65772658 65772796 -29499855 + B1F2 SINE Alu 1 148 -1 3 1086 260 256 0 8 chr17 65772860 65772942 -29499709 + L1M3 LINE L1 5310 5384 -805 3 1086 268 254 39 8 chr17 65773037 65773164 -29499487 + (TA)n Simple_repeat Simple_repeat 2 132 0 3 1086 659 175 0 182 chr17 65773709 65773863 -29498788 + B1_Mur4 SINE Alu 6 131 -19 3 1086 1069 148 28 0 chr17 65774267 65774443 -29498208 - URR1B DNA MER1_type 0 225 45 3 1086 25 0 0 0 chr17 65776126 65776151 -29496500 + AT_rich Low_complexity Low_complexity 1 25 0 3 1086 189 0 0 0 chr17 65776181 65776202 -29496449 + (TTA)n Simple_repeat Simple_repeat 1 21 0 3 1086 1391 65 0 21 chr17 65776202 65776392 -29496259 - L1Md_F2 LINE L1 -23 6559 6374 3 1086 1733 86 1 3 chr17 65776383 65776744 -29495907 + L1Md_A LINE L1 1091 1445 -4432 3 1086 8292 24 8 3 chr17 65776965 65777926 -29494725 - L1Md_F3 LINE L1 -30 6554 5589 3 1086 1394 166 85 35 chr17 65778582 65778901 -29493750 + ORR1C2 LTR MaLR 1 335 -49 3 1086 384 22 0 0 chr17 65778964 65779009 -29493642 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1086 253 28 82 27 chr17 65779022 65779095 -29493556 + (TA)n Simple_repeat Simple_repeat 1 77 0 3 1086 406 253 191 45 chr17 65779102 65779301 -29493350 - MTD LTR MaLR -39 380 153 3 1086 217 330 21 31 chr17 65779620 65779717 -29492934 + PB1D10 SINE Alu 1 96 -21 3 1086 183 184 0 0 chr17 65779721 65779759 -29492892 + (CGA)n Simple_repeat Simple_repeat 3 40 0 3 1086 1223 41 7 0 chr17 65780534 65780680 -29491971 + B1_Mus1 SINE Alu 2 148 0 3 1086 190 51 0 71 chr17 65780681 65780723 -29491928 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 3 1086 5079 182 46 9 chr17 65781075 65782439 -29490212 + L1VL4 LINE L1 787 2212 -3674 3 1086 3446 127 40 2 chr17 65782458 65783002 -29489649 + Lx2B LINE L1 5587 6151 -849 3 1086 933 235 83 33 chr17 65783006 65783449 -29489202 + RLTR20B3 LTR ERVK 19 535 -42 3 1086 784 181 136 12 chr17 65783493 65783655 -29488996 - Lx7 LINE L1 -1316 6380 6199 3 1086 385 210 291 39 chr17 65783687 65783817 -29488834 + Lx7 LINE L1 7367 7522 -174 3 1086 195 42 0 0 chr17 65783817 65783841 -29488810 + (TTGG)n Simple_repeat Simple_repeat 4 27 0 3 1086 385 210 291 39 chr17 65783841 65783968 -29488683 + Lx7 LINE L1 7523 7688 -8 3 1086 23 0 0 0 chr17 65784122 65784145 -29488506 + AT_rich Low_complexity Low_complexity 1 23 0 3 1086 1886 31 13 0 chr17 65784282 65784510 -29488141 - L1_Mus1 LINE L1 -588 5979 5749 3 1086 207 0 0 0 chr17 65784510 65784533 -29488118 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 1086 4177 33 0 0 chr17 65784533 65785013 -29487638 + L1_Mus1 LINE L1 6087 6566 -1 3 1086 255 206 0 45 chr17 65786613 65786679 -29485972 + Lx8 LINE L1 7403 7465 -8 3 1086 249 33 0 0 chr17 65787031 65787061 -29485590 + (T)n Simple_repeat Simple_repeat 1 30 0 3 1086 319 203 31 0 chr17 65787061 65787125 -29485526 + B1_Mur4 SINE Alu 11 76 -74 3 1086 380 58 0 0 chr17 65788356 65788408 -29484243 + L1Md_F2 LINE L1 6519 6570 -12 3 1086 412 319 18 0 chr17 65788418 65788531 -29484120 + PB1D10 SINE Alu 3 117 0 3 1086 272 188 14 0 chr17 65788598 65788667 -29483984 + (TA)n Simple_repeat Simple_repeat 2 71 0 3 1086 5771 53 16 2 chr17 65789006 65789812 -29482839 + RLTR22_Mus LTR ERVK 1 817 -991 3 1086 309 291 19 28 chr17 65790074 65790180 -29482471 + RMER12 LTR ERVK 1101 1205 -117 3 1086 719 175 7 0 chr17 65791373 65791527 -29481124 + GA-rich Low_complexity Low_complexity 2 156 0 3 1086 1153 200 36 40 chr17 65791561 65791837 -29480814 - RLTR46 LTR ERVK -4 316 42 3 1086 290 308 32 70 chr17 65792379 65792536 -29480115 + B4A SINE B4 1 151 -141 3 1086 2527 68 140 3 chr17 65793338 65793519 -29479132 - BGLII_Mus LTR ERVK 0 422 191 3 1086 669 25 0 0 chr17 65793519 65793598 -29479053 + (TC)n Simple_repeat Simple_repeat 1 79 0 3 1086 2527 68 140 3 chr17 65793598 65793787 -29478864 - BGLII_Mus LTR ERVK -232 190 1 3 1086 415 279 0 0 chr17 65793892 65793978 -29478673 + B1_Mur1 SINE Alu 42 127 -22 3 1086 225 196 0 21 chr17 65793981 65794028 -29478623 + GA-rich Low_complexity Low_complexity 3 48 0 3 1086 754 147 153 0 chr17 65794192 65794362 -29478289 + Lx9 LINE L1 7419 7614 -30 3 1086 258 32 0 0 chr17 65795165 65795196 -29477455 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1086 2000 131 75 3 chr17 65795923 65796284 -29476367 + ORR1B1 LTR MaLR 1 387 -7 3 1086 526 267 7 37 chr17 65796342 65796478 -29476173 - RSINE1 SINE B4 0 165 34 3 1086 332 298 32 11 chr17 65797040 65797135 -29475516 + B1F SINE Alu 39 135 -14 4 1086 269 310 0 0 chr17 65797135 65797206 -29475445 + GA-rich Low_complexity Low_complexity 2 72 0 4 1086 357 218 69 10 chr17 65797228 65797330 -29475321 + L1MA7 LINE L1 5233 5340 -803 4 135 5025 128 12 47 chr17 65797323 65798174 -29474477 + Lx LINE L1 5813 6633 -21 4 1087 479 297 161 99 chr17 65798224 65798819 -29473832 + L1MA7 LINE L1 5307 5938 -362 4 1087 417 224 122 26 chr17 65798912 65799068 -29473583 + L1MA7 LINE L1 6059 6229 -62 4 1087 267 103 0 0 chr17 65799068 65799107 -29473544 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1087 6870 32 1 0 chr17 65801222 65802014 -29470637 + L1Md_F2 LINE L1 5778 6570 -12 4 1087 1781 121 0 51 chr17 65802231 65802544 -29470107 - Lx2 LINE L1 0 6997 6701 4 1087 1545 58 0 5 chr17 65802551 65802741 -29469910 - B2_Mm2 SINE B2 -6 189 1 4 1087 408 321 7 48 chr17 65803422 65803569 -29469082 + B4A SINE B4 8 148 -144 4 1087 208 122 0 58 chr17 65803748 65803800 -29468851 + T-rich Low_complexity Low_complexity 2 50 0 4 1087 1148 68 7 0 chr17 65806188 65806334 -29466317 + B1_Mus2 SINE Alu 1 147 0 4 1087 7226 116 18 21 chr17 65806366 65808313 -29464338 + L1Md_F3 LINE L1 1 1941 -3942 4 1087 14391 41 9 70 chr17 65808332 65811103 -29461548 + L1Md_F3 LINE L1 3922 6493 -91 4 1087 3123 8 43 0 chr17 65811103 65811455 -29461196 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1087 56776 20 17 3 chr17 65811455 65817823 -29454828 + IAPEz-int LTR ERVK 8 6464 -17 4 1087 405 165 9 18 chr17 65817823 65817840 -29454811 + L1Md_F2 LINE L1 6472 6487 -95 4 1087 3123 8 43 0 chr17 65817840 65818192 -29454459 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1087 531 85 0 11 chr17 65818192 65818287 -29454364 + L1Md_F2 LINE L1 6489 6582 0 4 1087 303 28 0 0 chr17 65818306 65818342 -29454309 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 4 1087 37826 28 2 8 chr17 65818349 65823557 -29449094 + L1Md_T LINE L1 413 5586 -297 4 1087 8570 36 0 0 chr17 65823557 65824553 -29448098 + L1Md_T LINE L1 5587 6582 0 4 1087 34 0 0 0 chr17 65824638 65824672 -29447979 + AT_rich Low_complexity Low_complexity 1 34 0 4 1087 432 259 98 98 chr17 65824675 65824962 -29447689 + B4A SINE B4 3 289 -3 4 1087 232 281 0 15 chr17 65824968 65825033 -29447618 + (CATA)n Simple_repeat Simple_repeat 3 66 0 4 1087 469 264 25 8 chr17 65825351 65825473 -29447178 - B1_Mur4 SINE Alu -20 130 7 4 1087 21 36 0 0 chr17 65826715 65826743 -29445908 + AT_rich Low_complexity Low_complexity 1 28 0 4 1087 331 243 0 0 chr17 65826781 65826851 -29445800 + Lx9 LINE L1 7389 7458 -186 4 1087 392 289 71 20 chr17 65827337 65827552 -29445099 + L1MA7 LINE L1 5960 6184 -107 4 1087 3094 56 0 8 chr17 65829025 65829420 -29443231 - L1_Mus2 LINE L1 0 6566 6175 4 1087 288 70 0 0 chr17 65830992 65831035 -29441616 + (TCC)n Simple_repeat Simple_repeat 3 45 0 4 1087 839 100 7 0 chr17 65831037 65831187 -29441464 + (TC)n Simple_repeat Simple_repeat 2 152 0 4 1087 396 0 0 0 chr17 65831385 65831429 -29441222 + (GA)n Simple_repeat Simple_repeat 2 45 0 4 1087 1492 44 16 6 chr17 65832061 65832243 -29440408 + B2_Mm2 SINE B2 2 185 -10 4 1087 27 0 0 0 chr17 65832617 65832644 -29440007 + AT_rich Low_complexity Low_complexity 1 27 0 4 1087 578 233 132 48 chr17 65832867 65833034 -29439617 + B3A SINE B2 2 182 -16 4 1087 386 235 11 34 chr17 65833060 65833236 -29439415 + (CATA)n Simple_repeat Simple_repeat 3 174 0 4 1087 532 232 11 0 chr17 65833203 65833380 -29439271 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 1087 289 306 12 0 chr17 65834010 65834095 -29438556 + MLT1H1 LTR MaLR 70 155 -400 4 1087 220 313 24 0 chr17 65834110 65834193 -29438458 + C-rich Low_complexity Low_complexity 3 87 0 4 1087 863 184 13 26 chr17 65834794 65834945 -29437706 - B1_Mur4 SINE Alu 0 150 2 4 1087 408 291 155 43 chr17 65836487 65836764 -29435887 - L2 LINE L2 -704 2715 2408 4 1087 1630 129 72 90 chr17 65836785 65837117 -29435534 - ORR1A4 LTR MaLR -1 328 3 4 1087 6384 54 0 8 chr17 65837135 65837922 -29434729 + L1Md_F2 LINE L1 5792 6572 -10 4 1087 242 336 8 79 chr17 65838172 65838298 -29434353 + B1F SINE Alu 33 149 0 4 1087 327 25 0 0 chr17 65838932 65838972 -29433679 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 4 1087 4797 171 46 31 chr17 65839344 65840208 -29432443 - MERVL_2A-int LTR ERVL -379 5382 4506 4 1087 2361 196 206 58 chr17 65840208 65841033 -29431618 + Lx7 LINE L1 4500 5446 -434 4 1087 1224 197 74 16 chr17 65841041 65841351 -29431300 - RMER20A LTR ERVK 0 516 189 4 1087 590 0 14 0 chr17 65841351 65841421 -29431230 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 4 1087 1547 179 87 22 chr17 65841429 65841862 -29430789 + Lx7 LINE L1 5451 5919 -1777 4 1087 1648 256 21 8 chr17 65841859 65842244 -29430407 + Lx7 LINE L1 6185 6574 -1122 4 1087 2405 179 87 0 chr17 65842243 65842833 -29429818 + Lx5 LINE L1 5362 6009 -1041 4 1087 624 207 106 6 chr17 65842837 65842905 -29429746 + Lx6 LINE L1 7248 7315 -145 4 1087 261 75 0 0 chr17 65842905 65842945 -29429706 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 4 1087 624 207 106 6 chr17 65842945 65843046 -29429605 + Lx6 LINE L1 7316 7433 -27 4 1087 860 309 48 28 chr17 65843035 65843431 -29429220 + L1MA9 LINE L1 5481 5884 -428 4 1087 332 202 139 0 chr17 65843441 65843520 -29429131 - RMER5 LTR ERV1 -437 97 8 4 1087 1148 198 56 59 chr17 65843524 65843830 -29428821 + ORR1D1 LTR MaLR 70 374 0 4 1087 1052 108 6 0 chr17 65843945 65844111 -29428540 + (TTC)n Simple_repeat Simple_repeat 2 168 0 4 1087 22 35 0 0 chr17 65844296 65844325 -29428326 + AT_rich Low_complexity Low_complexity 1 29 0 4 1087 25 0 0 0 chr17 65845331 65845356 -29427295 + AT_rich Low_complexity Low_complexity 1 25 0 4 1087 898 290 102 53 chr17 65845449 65846267 -29426384 + L1MA4 LINE L1 4791 5623 -677 4 1087 784 271 50 13 chr17 65846308 65846607 -29426044 + L1MA4 LINE L1 5793 6102 -198 4 1087 1249 54 0 6 chr17 65847117 65847285 -29425366 + B2_Mm2 SINE B2 2 168 -27 4 1087 321 47 0 0 chr17 65847292 65847335 -29425316 + (GA)n Simple_repeat Simple_repeat 1 43 0 4 1087 264 367 64 71 chr17 65847684 65847995 -29424656 - MLT1J LTR MaLR -203 309 1 4 1087 24 32 0 0 chr17 65849248 65849279 -29423372 + AT_rich Low_complexity Low_complexity 1 31 0 4 1087 2046 130 39 22 chr17 65849796 65850157 -29422494 + ORR1B2 LTR MaLR 1 367 0 4 1087 180 328 0 0 chr17 65850265 65850323 -29422328 + MIR SINE MIR 198 255 -7 4 1087 301 296 44 36 chr17 65852197 65852334 -29420317 + Charlie10 DNA MER1_type 468 605 -2217 4 1087 407 284 50 0 chr17 65852351 65852492 -29420159 - B1F1 SINE Alu 0 149 2 4 1087 680 251 12 6 chr17 65852492 65852536 -29420115 - ID SINE ID -141 83 39 4 1087 536 303 61 82 chr17 65852592 65852750 -29419901 + Charlie10 DNA MER1_type 683 837 -1985 4 1087 1407 54 43 5 chr17 65852750 65852935 -29419716 + B2_Mm2 SINE B2 3 194 -1 4 1087 536 303 61 82 chr17 65852935 65853254 -29419397 + Charlie10 DNA MER1_type 838 1150 -1672 4 1087 421 272 39 23 chr17 65853315 65853443 -29419208 + RSINE1 SINE B4 2 131 -34 4 1087 387 0 0 0 chr17 65853443 65853486 -29419165 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1087 287 356 20 55 chr17 65853637 65853836 -29418815 - RMER4A LTR ERVK -267 199 8 4 1087 25364 109 61 34 chr17 65854215 65855345 -29417306 + MurERV4_19-int LTR ERVK 1575 2721 -3059 4 1087 360 0 0 0 chr17 65855345 65855385 -29417266 + (GA)n Simple_repeat Simple_repeat 2 41 0 4 1087 25364 109 61 34 chr17 65855385 65856997 -29415654 + MurERV4_19-int LTR ERVK 2722 4363 -1417 4 1087 2968 36 0 88 chr17 65856997 65857397 -29415254 + RLTR10B2 LTR ERVK 1 365 0 4 1087 25364 109 61 34 chr17 65857397 65858020 -29414631 + MurERV4_19-int LTR ERVK 4364 5006 -774 4 1087 1356 62 22 6 chr17 65858020 65858198 -29414453 + B2_Mm2 SINE B2 1 181 -14 4 1087 25364 109 61 34 chr17 65858198 65858688 -29413963 + MurERV4_19-int LTR ERVK 5007 5410 -370 4 1087 1296 27 0 0 chr17 65858688 65858835 -29413816 - B1_Mus2 SINE Alu 0 147 1 4 1087 25364 109 61 34 chr17 65858835 65859073 -29413578 + MurERV4_19-int LTR ERVK 5411 5779 -1 4 1087 1790 191 71 150 chr17 65859073 65859719 -29412932 + RMER19C LTR ERVK 1 595 -16 4 1087 5169 172 13 83 chr17 65859720 65860819 -29411832 + Lx3C LINE L1 5955 6976 0 4 1087 1499 267 105 47 chr17 65861064 65861140 -29411511 - L1MC1 LINE L1 -3 6330 6257 4 1087 5020 105 19 69 chr17 65861140 65861985 -29410666 - RLTR13B4 LTR ERVK 0 803 1 4 1087 1499 267 105 47 chr17 65861985 65862773 -29409878 - L1MC1 LINE L1 -77 6256 5416 4 1087 235 0 57 0 chr17 65863373 65863408 -29409243 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 1087 229 306 114 11 chr17 65863420 65863595 -29409056 - L1MC1 LINE L1 -762 5384 5192 4 1087 287 67 44 0 chr17 65864156 65864201 -29408450 + (TATG)n Simple_repeat Simple_repeat 1 47 0 4 1087 4130 184 41 37 chr17 65864240 65865097 -29407554 - RMER13A LTR ERVK 0 860 1 4 1087 1860 169 36 22 chr17 65865320 65865678 -29406973 - ORR1D1 LTR MaLR -11 363 1 4 1087 1299 73 56 0 chr17 65865919 65866098 -29406553 - B2_Mm1t SINE B2 -4 189 1 4 1087 327 104 0 0 chr17 65867174 65867222 -29405429 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 4 1087 216 0 0 0 chr17 65867342 65867366 -29405285 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 4 1087 25 0 0 0 chr17 65867789 65867814 -29404837 + AT_rich Low_complexity Low_complexity 1 25 0 4 1087 189 0 0 0 chr17 65868374 65868395 -29404256 + (TGGGGG)n Simple_repeat Simple_repeat 6 26 0 4 1087 291 239 22 22 chr17 65868547 65868637 -29404014 - MTE2a LTR MaLR -17 362 273 4 1087 3353 51 2 0 chr17 65869650 65870045 -29402606 + MTA_Mm LTR MaLR 1 396 0 4 1087 4591 151 86 17 chr17 65870323 65871156 -29401495 + Lx5 LINE L1 6149 7039 -11 4 1087 22 56 0 0 chr17 65871156 65871192 -29401459 + AT_rich Low_complexity Low_complexity 1 36 0 4 1087 673 161 67 30 chr17 65871271 65871405 -29401246 - B1_Mur4 SINE Alu -1 149 11 4 1087 938 276 104 42 chr17 65872170 65872525 -29400126 + MTEb LTR MaLR 1 377 -2 4 1087 617 304 18 61 chr17 65872669 65872897 -29399754 + B4 SINE B4 1 218 -74 4 1087 1532 185 282 0 chr17 65872897 65873354 -29399297 + Lx9 LINE L1 7058 7643 -1 4 1087 414 139 0 0 chr17 65873414 65873486 -29399165 + (CA)n Simple_repeat Simple_repeat 1 72 0 4 1087 1251 194 43 7 chr17 65873505 65873785 -29398866 + RMER15 LTR ERVL 95 384 -191 4 1087 5228 147 138 1 chr17 65874085 65875040 -29397611 - L1_Mur2 LINE L1 -740 5137 4052 4 1087 7973 63 7 17 chr17 65875040 65876419 -29396232 + L1_Mus2 LINE L1 5124 6511 -55 4 1087 1043 72 36 0 chr17 65876419 65876558 -29396093 - B1_Mus2 SINE Alu 0 147 4 4 1087 7973 49 4 24 chr17 65876558 65876634 -29396017 + L1_Mus2 LINE L1 6512 6566 0 4 1087 881 296 70 18 chr17 65876973 65877417 -29395234 + RMER5 LTR ERV1 68 534 0 4 1087 230 319 0 0 chr17 65877600 65877669 -29394982 + MER46C DNA MER2_type 145 213 -125 4 1087 295 279 36 70 chr17 65878486 65878704 -29393947 - L1M4b LINE L1 -4519 2507 2303 5 1087 746 214 94 121 chr17 65878704 65878799 -29393852 - MT2A LTR ERVL 0 601 521 5 1087 396 0 0 0 chr17 65878799 65878843 -29393808 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1087 885 208 104 96 chr17 65878843 65879215 -29393436 - MT2A LTR ERVL -81 520 1 5 1087 390 115 0 0 chr17 65879543 65879604 -29393047 + (TG)n Simple_repeat Simple_repeat 1 61 0 5 1087 1456 69 16 0 chr17 65879760 65879949 -29392702 + B2_Mm2 SINE B2 2 193 -2 5 1087 747 313 42 67 chr17 65880000 65880401 -29392250 - L1M4b LINE L1 -5900 1434 1044 5 1087 1221 41 0 0 chr17 65880424 65880571 -29392080 + B1_Mus1 SINE Alu 2 148 0 5 1087 732 278 174 17 chr17 65880621 65880972 -29391679 - MTD LTR MaLR -13 406 1 5 1087 281 183 32 32 chr17 65880996 65881058 -29391593 - L1M4b LINE L1 -6367 967 906 5 1087 582 224 8 16 chr17 65881118 65881245 -29391406 - Lx7 LINE L1 -1970 5726 5601 5 1087 1180 185 5 5 chr17 65881245 65881462 -29391189 - MTC LTR MaLR 0 421 205 5 1087 180 0 0 0 chr17 65881463 65881483 -29391168 + (CTTG)n Simple_repeat Simple_repeat 2 21 0 5 1087 8718 82 16 7 chr17 65881483 65883204 -29389447 - L1_Mus3 LINE L1 0 6638 4934 5 1087 1085 105 0 0 chr17 65883204 65883347 -29389304 + B1_Mus2 SINE Alu 2 144 -3 5 1087 1066 60 0 20 chr17 65883350 65883503 -29389148 + (GAAA)n Simple_repeat Simple_repeat 2 151 0 5 1087 8718 92 19 16 chr17 65883503 65883778 -29388873 - L1_Mus3 LINE L1 -950 4933 4659 5 1087 698 188 150 17 chr17 65883778 65883951 -29388700 - MTC LTR MaLR -196 200 5 5 1087 540 241 21 21 chr17 65883960 65884100 -29388551 - L1_Rod LINE L1 -276 5571 5432 5 1087 222 91 0 0 chr17 65884109 65884142 -29388509 + (TTA)n Simple_repeat Simple_repeat 2 34 0 5 1087 3267 48 5 12 chr17 65884498 65884901 -29387750 + MTB LTR MaLR 1 400 0 5 1087 327 160 0 0 chr17 65886007 65886082 -29386569 + (TG)n Simple_repeat Simple_repeat 2 76 0 5 1087 388 150 46 46 chr17 65886479 65886654 -29385997 + (TATAA)n Simple_repeat Simple_repeat 3 177 0 5 1087 396 322 86 65 chr17 65886673 65887012 -29385639 - MLT1F LTR MaLR -2 546 201 5 1087 342 0 0 0 chr17 65887081 65887119 -29385532 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1087 286 179 19 112 chr17 65887132 65887239 -29385412 - L1MC LINE L1 -2362 3784 3688 5 1087 607 167 74 80 chr17 65887482 65887658 -29384993 - Lx9 LINE L1 -1 7643 7469 5 1087 453 81 0 0 chr17 65888817 65888879 -29383772 + (GGA)n Simple_repeat Simple_repeat 2 63 0 5 1087 259 121 35 0 chr17 65890223 65890281 -29382370 + (CAAA)n Simple_repeat Simple_repeat 1 60 0 5 1087 330 212 51 64 chr17 65890858 65891014 -29381637 - Lx6 LINE L1 -6 7454 7301 5 1087 2685 54 14 33 chr17 65890989 65891354 -29381297 + L1_Mm LINE L1 4425 4782 -1101 5 1087 32 26 0 0 chr17 65891354 65891393 -29381258 + AT_rich Low_complexity Low_complexity 1 39 0 5 1087 677 141 0 16 chr17 65891395 65891518 -29381133 + GA-rich Low_complexity Low_complexity 3 123 0 5 1087 868 52 0 0 chr17 65891533 65891648 -29381003 + B1_Mus1 SINE Alu 33 147 -1 5 1087 309 51 0 0 chr17 65891650 65891689 -29380962 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 5 1087 513 104 0 0 chr17 65891683 65891760 -29380891 + (GA)n Simple_repeat Simple_repeat 2 78 0 5 1087 1631 229 116 67 chr17 65891802 65892286 -29380365 - Lx7 LINE L1 -337 7359 6836 5 1087 1448 83 0 5 chr17 65892286 65892479 -29380172 + B2_Mm2 SINE B2 3 194 -1 5 1087 1631 229 116 67 chr17 65892479 65892578 -29380073 - Lx7 LINE L1 -861 6835 6747 5 1087 1096 84 163 0 chr17 65892586 65892752 -29379899 + B2_Mm2 SINE B2 2 194 -1 5 1087 435 43 16 87 chr17 65892757 65892883 -29379768 + (GGAGAA)n Simple_repeat Simple_repeat 5 121 0 5 1087 364 286 99 0 chr17 65892917 65893008 -29379643 - Lx7 LINE L1 -972 6724 6625 5 1087 2325 89 6 69 chr17 65893013 65893362 -29379289 - ORR1A2 LTR MaLR 0 327 1 5 1087 5414 98 13 6 chr17 65893362 65894193 -29378458 - ORR1A2-int LTR MaLR 0 1963 1127 5 1087 5708 188 53 15 chr17 65894193 65895427 -29377224 - L1_Mur3 LINE L1 -3013 2867 1586 5 1087 2297 66 3 3 chr17 65895432 65895751 -29376900 - ORR1A2 LTR MaLR -8 319 1 5 1087 1105 254 34 56 chr17 65895751 65896482 -29376169 - L1_Mur3 LINE L1 -4291 1589 868 5 1087 1395 79 16 0 chr17 65896714 65896903 -29375748 + B2_Mm1t SINE B2 1 192 -1 5 1087 569 173 0 45 chr17 65897078 65897211 -29375440 - L1Md_F3 LINE L1 -1 6583 6457 5 1087 24 0 0 0 chr17 65898802 65898826 -29373825 + AT_rich Low_complexity Low_complexity 1 24 0 5 1087 592 279 7 0 chr17 65898831 65898967 -29373684 - B1_Mur2 SINE Alu -10 139 3 5 1087 1356 92 11 0 chr17 65899062 65899247 -29373404 - B2_Mm2 SINE B2 -8 187 1 5 1087 231 36 0 0 chr17 65899261 65899289 -29373362 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 5 1087 208 323 0 30 chr17 65899338 65899437 -29373214 + (TATATG)n Simple_repeat Simple_repeat 3 98 0 5 1087 482 63 37 25 chr17 65899502 65899583 -29373068 - L1Md_F2 LINE L1 -1 6581 6500 5 1087 22 0 0 0 chr17 65899759 65899781 -29372870 + AT_rich Low_complexity Low_complexity 1 22 0 5 1087 679 226 111 16 chr17 65899783 65899972 -29372679 - B3 SINE B2 -4 212 6 5 1087 302 71 0 0 chr17 65900169 65900211 -29372440 - HAL1-3A_ME LINE L1 -840 2018 1977 5 1087 525 243 6 0 chr17 65900246 65900592 -29372059 + (TG)n Simple_repeat Simple_repeat 1 348 0 5 1087 369 0 0 0 chr17 65900862 65900903 -29371748 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1087 680 226 27 7 chr17 65900907 65901054 -29371597 - B3A SINE B2 -48 150 1 5 1087 692 199 43 0 chr17 65901074 65901215 -29371436 - B1_Mur2 SINE Alu -1 148 2 5 1087 30 0 0 0 chr17 65901223 65901253 -29371398 + AT_rich Low_complexity Low_complexity 1 30 0 5 1087 525 331 6 6 chr17 65901654 65901833 -29370818 - B4 SINE B4 -22 270 92 5 1087 278 363 0 62 chr17 65901932 65902111 -29370540 + RMER4A LTR ERVK 23 190 -276 5 1087 264 337 21 11 chr17 65902950 65903043 -29369608 - RSINE1 SINE B4 -65 100 7 5 1087 423 265 0 0 chr17 65903053 65903215 -29369436 + (TG)n Simple_repeat Simple_repeat 1 162 0 5 1087 327 104 0 0 chr17 65903355 65903403 -29369248 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1087 407 220 103 63 chr17 65903487 65903613 -29369038 + B3 SINE B2 7 137 -79 5 1087 290 312 112 0 chr17 65903954 65904023 -29368628 + MLT1H LTR MaLR 32 113 -436 5 1087 252 0 0 0 chr17 65904023 65904051 -29368600 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 1087 290 312 112 0 chr17 65904051 65904106 -29368545 + MLT1H LTR MaLR 114 169 -380 5 1087 246 250 87 0 chr17 65904143 65904210 -29368441 + MIR SINE MIR 77 151 -125 5 1087 1387 93 16 0 chr17 65904462 65904645 -29368006 - B2_Mm2 SINE B2 -8 187 2 5 1087 226 176 59 0 chr17 65904708 65904759 -29367892 - RMER15 LTR ERVL 0 575 522 5 1087 925 239 121 29 chr17 65904752 65905058 -29367593 - RMER15 LTR ERVL -205 370 37 5 1087 307 317 65 8 chr17 65905500 65905624 -29367027 + MER58A DNA MER1_type 5 135 -89 5 1087 1124 63 126 0 chr17 65905977 65906136 -29366515 + B2_Mm2 SINE B2 3 181 -14 5 1087 1181 244 88 9 chr17 65906161 65906504 -29366147 + MTE2b LTR MaLR 10 379 0 5 1087 450 0 0 0 chr17 65908655 65908705 -29363946 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1087 1811 88 47 4 chr17 65910146 65910421 -29362230 - ORR1A2 LTR MaLR -40 287 1 5 1087 675 283 93 91 chr17 65910457 65910482 -29362169 + RCHARR1 DNA MER1_type 1 24 -950 5 1087 1391 75 21 0 chr17 65910482 65910668 -29361983 + B2_Mm2 SINE B2 2 191 -4 5 1087 675 283 93 91 chr17 65910668 65911139 -29361512 + RCHARR1 DNA MER1_type 25 498 -476 5 1087 1224 72 0 0 chr17 65911265 65911829 -29360822 + (TG)n Simple_repeat Simple_repeat 1 564 0 5 1087 1188 231 140 2 chr17 65911832 65912254 -29360397 + RCHARR1 DNA MER1_type 495 974 0 5 1087 226 299 30 0 chr17 65912648 65912715 -29359936 + Tigger7 DNA MER2_type 50 118 -2373 5 1087 21 0 0 0 chr17 65912723 65912744 -29359907 + AT_rich Low_complexity Low_complexity 1 21 0 5 1087 1116 129 73 282 chr17 65913388 65913842 -29358809 - RLTR15 LTR ERVK 0 359 1 5 1087 594 258 86 40 chr17 65913843 65914041 -29358610 + Tigger7 DNA MER2_type 203 409 -2082 5 1087 683 231 117 55 chr17 65914025 65914135 -29358516 + Tigger7 DNA MER2_type 2220 2327 -164 5 1087 1358 115 5 5 chr17 65914135 65914328 -29358323 - B2_Mm2 SINE B2 -1 194 2 5 1087 683 231 117 55 chr17 65914328 65914473 -29358178 + Tigger7 DNA MER2_type 2328 2491 0 5 1087 243 0 0 0 chr17 65915368 65915395 -29357256 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 5 1087 1236 28 7 0 chr17 65915708 65915853 -29356798 + B1_Mus2 SINE Alu 2 147 0 5 1087 398 118 21 21 chr17 65916521 65916616 -29356035 + (CA)n Simple_repeat Simple_repeat 2 96 0 5 1087 282 282 34 76 chr17 65916708 65916827 -29355824 + PB1D10 SINE Alu 1 114 -3 5 1087 3746 60 2 2 chr17 65916982 65917449 -29355202 + L1_Mus1 LINE L1 6101 6567 0 5 1087 358 296 30 48 chr17 65917571 65917738 -29354913 + MT2A LTR ERVL 134 297 -236 5 1087 653 46 0 0 chr17 65918041 65918128 -29354523 + B1_Mus2 SINE Alu 61 147 0 5 1087 21 36 0 0 chr17 65918259 65918287 -29354364 + AT_rich Low_complexity Low_complexity 1 28 0 5 1087 679 178 8 17 chr17 65918391 65918511 -29354140 - PB1D9 SINE Alu 0 120 2 5 1087 758 230 73 0 chr17 65918554 65918732 -29353919 + B3A SINE B2 2 192 -6 5 1087 304 254 14 0 chr17 65918884 65918955 -29353696 - MER44C DNA MER2_type -12 721 650 5 1087 467 283 128 24 chr17 65918958 65919208 -29353443 - Tigger5 DNA MER2_type 0 2406 2131 5 1087 389 319 16 16 chr17 65919276 65919397 -29353254 - MER44C DNA MER2_type -469 264 144 5 1087 358 113 358 28 chr17 65919417 65919526 -29353125 - B2_Mm2 SINE B2 -3 192 48 5 1087 1243 87 35 0 chr17 65919559 65919731 -29352920 - B2_Mm1t SINE B2 -14 179 2 5 1087 238 174 99 28 chr17 65919746 65919817 -29352834 - MER44C DNA MER2_type -620 113 38 5 1087 2143 225 178 11 chr17 65920073 65920639 -29352012 + RMER1B Other Other 2 662 -404 5 1087 712 111 37 9 chr17 65921076 65921185 -29351466 + RMER1B Other Other 651 762 -304 5 1087 270 0 0 0 chr17 65921232 65921262 -29351389 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 1087 203 387 71 28 chr17 65921263 65921404 -29351247 - MIRb SINE MIR -121 147 1 5 1087 288 315 65 0 chr17 65921915 65922007 -29350644 + RLTR28 LTR ERVL 1 98 -383 5 1087 658 186 87 36 chr17 65922004 65922199 -29350452 + RLTR28 LTR ERVL 214 418 -106 5 1087 1245 68 85 0 chr17 65922520 65922696 -29349955 - B2_Mm1t SINE B2 -1 192 2 5 1087 1440 74 11 0 chr17 65922716 65922906 -29349745 - B2_Mm1t SINE B2 0 193 2 5 1087 1904 172 99 5 chr17 65922914 65923299 -29349352 - MTC LTR MaLR 0 421 1 5 1087 229 303 94 80 chr17 65923789 65924191 -29348460 + RMER10A LTR ERVL 18 425 -17 5 1087 2026 104 62 0 chr17 65924507 65924814 -29347837 - ORR1A4 LTR MaLR -3 326 1 6 1087 685 97 40 0 chr17 65924940 65925064 -29347587 + MTB-int LTR MaLR 970 1098 0 6 1087 2802 57 87 5 chr17 65925064 65925434 -29347217 + MTB LTR MaLR 1 400 0 6 1087 969 147 9 128 chr17 65925690 65925908 -29346743 + B2_Mm2 SINE B2 2 193 -2 6 1087 292 282 83 86 chr17 65926182 65926508 -29346143 - RLTR15 LTR ERVK -14 345 21 6 1087 2186 67 16 45 chr17 65926922 65927236 -29345415 + L1_Mus1 LINE L1 6263 6567 0 6 1087 22 56 0 0 chr17 65928046 65928082 -29344569 + AT_rich Low_complexity Low_complexity 1 36 0 6 135 905 116 0 0 chr17 65929132 65929270 -29343381 + B1_Mus2 SINE Alu 9 146 -1 6 1088 260 250 132 73 chr17 65930850 65931122 -29341529 - LTR65 LTR ERV1 -329 340 53 6 1088 1213 125 38 0 chr17 65931463 65931647 -29341004 - B2_Mm2 SINE B2 -4 191 1 6 1088 327 25 0 0 chr17 65931649 65931689 -29340962 + (A)n Simple_repeat Simple_repeat 1 40 0 6 1088 399 217 412 33 chr17 65933143 65933415 -29339236 + MTEa LTR MaLR 5 379 0 6 1088 321 153 105 99 chr17 65933967 65934072 -29338579 + B1_Mur2 SINE Alu 44 149 0 6 1088 458 217 36 0 chr17 65935161 65935271 -29337380 - B1_Mur1 SINE Alu -1 148 30 6 1088 716 204 14 7 chr17 65935391 65935539 -29337112 + B3 SINE B2 63 211 -5 6 1088 24 53 0 0 chr17 65935813 65935851 -29336800 + AT_rich Low_complexity Low_complexity 1 38 0 6 1088 340 287 64 35 chr17 65936136 65936187 -29336464 + B1F SINE Alu 1 142 -4 6 1088 463 195 11 0 chr17 65936187 65936274 -29336377 + ID_B1 SINE B4 130 217 -7 6 1088 586 203 54 8 chr17 65937360 65937489 -29335162 + B1_Mur2 SINE Alu 15 149 0 6 1088 954 60 90 0 chr17 65937614 65937748 -29334903 - B1_Mus2 SINE Alu 0 147 2 6 1088 313 296 0 36 chr17 65938676 65938816 -29333835 - ID_B1 SINE B4 -84 140 6 6 1088 367 254 45 30 chr17 65938886 65939020 -29333631 + B1F SINE Alu 14 149 0 6 1088 379 279 56 28 chr17 65939205 65939312 -29333339 - PB1D7 SINE Alu -1 119 10 6 1088 816 251 25 0 chr17 65939397 65939600 -29333051 + B3 SINE B2 2 209 -7 6 1088 506 311 151 34 chr17 65939633 65940168 -29332483 + Lx8 LINE L1 6876 7473 0 6 1088 603 132 28 9 chr17 65940319 65940426 -29332225 + B1_Mus2 SINE Alu 39 147 0 6 1088 694 218 55 11 chr17 65940828 65941009 -29331642 + B3 SINE B2 23 211 -5 6 1088 183 167 0 0 chr17 65941375 65941417 -29331234 + GA-rich Low_complexity Low_complexity 3 44 0 6 1088 228 180 0 0 chr17 65941831 65941845 -29330806 + A-rich Low_complexity Low_complexity 1 14 0 6 1088 1117 88 0 0 chr17 65941845 65941992 -29330659 + B1_Mus2 SINE Alu 1 147 0 6 1088 228 180 0 0 chr17 65941992 65942038 -29330613 + A-rich Low_complexity Low_complexity 15 60 0 6 1088 506 225 33 53 chr17 65942499 65942649 -29330002 + B1_Mur4 SINE Alu 4 150 0 6 1088 24 0 0 0 chr17 65943587 65943611 -29329040 + AT_rich Low_complexity Low_complexity 1 24 0 6 1088 582 338 0 0 chr17 65944613 65944758 -29327893 - RSINE1 SINE B4 -17 148 4 6 1088 313 221 105 0 chr17 65945475 65945561 -29327090 - RSINE1 SINE B4 -59 106 12 6 1088 1410 85 16 0 chr17 65946106 65946295 -29326356 + B2_Mm2 SINE B2 2 193 -2 6 1088 655 162 0 0 chr17 65947663 65947774 -29324877 - B1_Mus1 SINE Alu -11 137 27 6 1088 402 311 130 28 chr17 65948169 65948472 -29324179 + LTR40b LTR ERVL 127 467 -52 6 1088 279 232 73 0 chr17 65949122 65949204 -29323447 + B1_Mm SINE Alu 54 141 -6 6 1088 949 188 58 29 chr17 65949417 65949625 -29323026 - B3 SINE B2 -2 214 1 6 1088 205 286 0 87 chr17 65949704 65949773 -29322878 + L2a LINE L2 3338 3400 -26 6 1088 830 204 160 11 chr17 65949837 65950025 -29322626 - B3 SINE B2 0 216 1 6 1088 223 192 96 0 chr17 65950865 65950917 -29321734 - B1F SINE Alu -1 148 92 6 1088 647 192 46 0 chr17 65951029 65951159 -29321492 + B1_Mur4 SINE Alu 9 144 -6 6 1088 253 231 165 23 chr17 65951499 65951632 -29321019 - MER2 DNA MER2_type -107 238 87 6 1088 591 274 45 25 chr17 65952004 65952161 -29320490 - RSINE1 SINE B4 0 165 6 6 1088 282 205 11 103 chr17 65953343 65953357 -29319294 + MT2B LTR ERVL 156 234 -367 6 1088 291 260 41 0 chr17 65953357 65953430 -29319221 + B1_Mus1 SINE Alu 3 78 -70 6 1088 923 286 71 26 chr17 65953715 65954067 -29318584 + MTE2b LTR MaLR 1 368 -11 6 1088 581 263 70 28 chr17 65954249 65954464 -29318187 - Tigger7 DNA MER2_type -1884 607 384 6 1088 331 252 98 32 chr17 65954575 65954698 -29317953 - Tigger7 DNA MER2_type -2358 133 3 6 1088 599 231 91 29 chr17 65954817 65955026 -29317625 - B4 SINE B4 -70 222 1 6 1088 255 170 0 0 chr17 65955845 65955892 -29316759 + GA-rich Low_complexity Low_complexity 2 48 0 6 1088 627 168 8 22 chr17 65956043 65956177 -29316474 - URR1B DNA MER1_type 0 225 94 6 1088 21 0 0 0 chr17 65956763 65956784 -29315867 + AT_rich Low_complexity Low_complexity 1 21 0 6 1088 550 175 109 16 chr17 65956795 65956923 -29315728 + B1_Mur1 SINE Alu 10 149 0 6 1088 937 234 145 62 chr17 65957321 65957727 -29314924 + RLTR20B1 LTR ERVK 69 508 -55 6 1088 271 93 47 0 chr17 65957816 65957859 -29314792 + RMER17C LTR ERVK 10 54 -356 6 1088 264 286 0 0 chr17 65958162 65958225 -29314426 + ID_B1 SINE B4 94 156 -68 6 1088 2521 250 175 27 chr17 65958235 65959021 -29313630 + Lx8 LINE L1 6422 7323 -150 6 1088 828 194 48 43 chr17 65959048 65959236 -29313415 + B3A SINE B2 5 193 -5 6 1088 37 19 0 18 chr17 65959358 65959387 -29313264 + AT_rich Low_complexity Low_complexity 1 29 0 6 1088 777 254 55 5 chr17 65959387 65959589 -29313062 + B3 SINE B2 3 214 -2 6 1088 37 19 0 18 chr17 65959589 65959614 -29313037 + AT_rich Low_complexity Low_complexity 1 25 0 6 1088 252 289 67 67 chr17 65961112 65961216 -29311435 - PB1D7 SINE Alu -8 112 9 6 1088 23 0 0 0 chr17 65962215 65962238 -29310413 + GC_rich Low_complexity Low_complexity 1 23 0 6 1088 26 74 0 0 chr17 65962255 65962309 -29310342 + GC_rich Low_complexity Low_complexity 1 54 0 6 1088 222 37 0 0 chr17 65962370 65962397 -29310254 + (CCCGG)n Simple_repeat Simple_repeat 5 31 0 6 1088 192 77 0 0 chr17 65962507 65962533 -29310118 + (CCCCAG)n Simple_repeat Simple_repeat 3 28 0 6 1088 24 0 0 0 chr17 65962658 65962682 -29309969 + GC_rich Low_complexity Low_complexity 1 24 0 6 1088 1775 229 46 62 chr17 65964056 65964685 -29307966 - RCHARR1 DNA MER1_type -9 965 347 6 1088 716 269 20 10 chr17 65964690 65964885 -29307766 + B3A SINE B2 1 197 -1 6 1088 1092 274 92 6 chr17 65964870 65965219 -29307432 - RCHARR1 DNA MER1_type -593 381 3 6 1088 207 100 0 0 chr17 65965856 65965886 -29306765 + (TA)n Simple_repeat Simple_repeat 2 31 0 6 1088 271 257 41 99 chr17 65965888 65966009 -29306642 + PB1D9 SINE Alu 1 114 -6 6 1088 194 265 15 0 chr17 65966009 65966077 -29306574 + GA-rich Low_complexity Low_complexity 2 70 0 6 1088 230 188 261 0 chr17 65966428 65966497 -29306154 - B3 SINE B2 -7 209 123 6 1088 3531 125 25 49 chr17 65966701 65967313 -29305338 + MT2B LTR ERVL 5 601 0 6 1088 371 321 0 45 chr17 65967511 65967622 -29305029 + PB1D10 SINE Alu 3 108 -9 6 1088 318 347 109 10 chr17 65967769 65967961 -29304690 + MIR SINE MIR 19 229 -33 6 1088 398 259 17 0 chr17 65968343 65968469 -29304182 - MTEa LTR MaLR -8 371 245 6 1088 626 277 12 6 chr17 65968623 65968790 -29303861 - RLTR20C LTR ERVK 0 568 401 6 1088 796 199 104 73 chr17 65968788 65969075 -29303576 - RLTR20C LTR ERVK -238 296 1 6 1088 382 258 114 0 chr17 65969075 65969207 -29303444 - B3A SINE B2 -50 148 2 6 1088 1131 108 0 0 chr17 65969811 65969959 -29302692 - B1_Mus1 SINE Alu 0 148 1 6 1088 972 190 47 38 chr17 65970883 65971096 -29301555 + B3 SINE B2 2 216 0 6 1088 288 0 0 0 chr17 65972059 65972091 -29300560 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 6 1088 1134 76 6 0 chr17 65972091 65972249 -29300402 - B2_Mm1a SINE B2 -33 160 2 6 1088 505 129 0 23 chr17 65972314 65972401 -29300250 - B1_Mm SINE Alu -2 145 61 6 1088 229 180 19 39 chr17 65972359 65972411 -29300240 - MT2B LTR ERVL -344 257 207 6 1088 293 235 81 10 chr17 65972423 65972522 -29300129 + L1MB2 LINE L1 6022 6127 -44 6 1088 226 181 130 65 chr17 65972756 65972820 -29299831 + B3 SINE B2 133 203 -13 6 1088 912 158 14 0 chr17 65972820 65972966 -29299685 - B1F2 SINE Alu 0 149 2 6 1088 226 181 130 65 chr17 65972966 65972978 -29299673 + B3 SINE B2 204 214 -2 6 1088 298 227 124 26 chr17 65973179 65973292 -29299359 - MLT1A1 LTR MaLR -8 400 277 6 1088 226 91 183 83 chr17 65973344 65973404 -29299247 + RLTR31A_Mm LTR ERVK 1 66 -518 6 1088 338 93 93 0 chr17 65973354 65973408 -29299243 - RLTR31B_Mm LTR ERVK -492 65 7 6 1088 1682 163 19 7 chr17 65973717 65974026 -29298625 - ORR1D1 LTR MaLR 0 374 62 6 1088 290 219 23 14 chr17 65974037 65974134 -29298517 + PB1D10 SINE Alu 16 115 -34 6 1088 210 286 39 0 chr17 65974135 65974212 -29298439 + GA-rich Low_complexity Low_complexity 3 82 0 6 1088 303 28 0 0 chr17 65974610 65974646 -29298005 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 1088 407 227 0 0 chr17 65974688 65974763 -29297888 - RSINE1 SINE B4 -88 77 3 6 1088 192 77 0 0 chr17 65975927 65975953 -29296698 + (CAGC)n Simple_repeat Simple_repeat 2 27 0 6 1088 693 237 43 37 chr17 65976079 65976241 -29296410 + RSINE1 SINE B4 3 165 0 6 1088 264 77 0 0 chr17 65976372 65976411 -29296240 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1088 267 172 11 21 chr17 65976432 65976493 -29296158 + (CA)n Simple_repeat Simple_repeat 1 62 0 6 1088 483 18 0 0 chr17 65976493 65976549 -29296102 + (TC)n Simple_repeat Simple_repeat 1 56 0 6 1088 267 172 11 21 chr17 65976549 65976565 -29296086 + (CA)n Simple_repeat Simple_repeat 1 16 0 7 1088 420 20 0 0 chr17 65976565 65976614 -29296037 + (CCA)n Simple_repeat Simple_repeat 3 51 0 7 1088 267 172 11 21 chr17 65976614 65976630 -29296021 + (CA)n Simple_repeat Simple_repeat 1 15 0 7 1088 694 303 75 55 chr17 65976634 65976941 -29295710 + ORR1E LTR MaLR 38 350 -9 7 1088 503 245 68 54 chr17 65977465 65977612 -29295039 - B1F1 SINE Alu 0 149 1 7 1088 4296 42 2 8 chr17 65978479 65978985 -29293666 + RLTR1C LTR ERV1 1 503 0 7 1088 323 281 0 30 chr17 65979246 65979345 -29293306 - RSINE1 SINE B4 -67 98 3 7 1088 760 236 68 0 chr17 65979738 65979929 -29292722 + B3 SINE B2 5 208 -8 7 1088 437 315 83 73 chr17 65979949 65980237 -29292414 - ORR1E LTR MaLR -60 299 9 7 1088 189 0 0 0 chr17 65980426 65980447 -29292204 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 7 1088 441 0 0 0 chr17 65980447 65980496 -29292155 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1088 839 150 0 0 chr17 65980496 65980629 -29292022 - B1_Mus2 SINE Alu -1 146 14 7 1088 323 233 0 109 chr17 65980541 65980642 -29292009 - MT2B LTR ERVL -345 256 167 7 1088 1431 65 43 0 chr17 65981214 65981399 -29291252 - B2_Mm2 SINE B2 -1 194 2 7 1088 713 283 78 51 chr17 65981472 65981804 -29290847 + MLT1B LTR MaLR 5 345 -45 7 1088 1027 150 10 31 chr17 65982065 65982258 -29290393 - URR1B DNA MER1_type 0 225 37 7 1088 2802 65 62 0 chr17 65983114 65983501 -29289150 - RLTR10A LTR ERVK 0 411 1 7 1088 838 131 22 0 chr17 65983509 65983646 -29289005 - B1_Mur1 SINE Alu -2 147 8 7 1088 1011 59 81 0 chr17 65983761 65983800 -29288851 + B1_Mus2 SINE Alu 1 39 -108 7 1088 234 0 0 0 chr17 65983800 65983826 -29288825 + (TTAGGG)n Simple_repeat Simple_repeat 2 27 0 7 1088 1011 59 81 0 chr17 65983826 65983922 -29288729 + B1_Mus2 SINE Alu 40 145 -2 7 1088 225 94 0 0 chr17 65983922 65983954 -29288697 + (A)n Simple_repeat Simple_repeat 1 32 0 7 1088 1130 84 14 5 chr17 65988502 65988677 -29283974 - B2_Mm2 SINE B2 -17 181 1 7 1088 212 297 39 29 chr17 65989187 65989299 -29283352 - MIRb SINE MIR -62 206 86 7 1088 2068 203 17 7 chr17 65989657 65990073 -29282578 - MTC LTR MaLR 0 421 2 7 1088 237 175 222 0 chr17 65990419 65990482 -29282169 + ID2 SINE ID 3 79 -4 7 1088 239 304 0 0 chr17 65990500 65990556 -29282095 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 1088 1257 174 5 14 chr17 65990780 65990990 -29281661 - B3 SINE B2 -7 209 2 7 1088 547 241 211 14 chr17 65991366 65991589 -29281062 - Lx8 LINE L1 -327 7146 6880 7 1088 265 281 41 69 chr17 65993327 65993472 -29279179 - MTEa LTR MaLR 0 379 239 7 1088 830 199 55 20 chr17 65993582 65993882 -29278769 + MT2A LTR ERVL 176 533 0 7 1088 414 286 3 152 chr17 65994590 65994958 -29277693 + ORR1D2 LTR MaLR 8 317 -62 7 1088 246 286 36 54 chr17 65995147 65995258 -29277393 - MLT1A LTR MaLR 0 374 266 7 1088 823 66 0 47 chr17 65995382 65995509 -29277142 - B1_Mm SINE Alu -24 123 3 7 1088 2133 155 34 24 chr17 65995511 65995921 -29276730 - MTC LTR MaLR -7 414 1 7 1088 533 133 0 32 chr17 65995921 65996002 -29276649 - RMER10A LTR ERVL -336 106 29 7 1088 180 0 0 0 chr17 65996966 65996986 -29275665 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1088 280 236 69 0 chr17 65997120 65997192 -29275459 + ID4_ SINE ID 2 78 -5 7 1088 315 273 155 47 chr17 65997373 65997554 -29275097 + MIRb SINE MIR 44 234 -34 7 1088 4113 173 106 94 chr17 65997619 65998902 -29273749 - RMER1A Other Other 0 1066 1 7 1088 254 248 248 0 chr17 65999468 65999581 -29273070 - MER46C DNA MER2_type -114 224 84 7 1088 483 269 20 27 chr17 65999839 65999988 -29272663 - B4A SINE B4 -142 150 3 7 1088 732 158 0 52 chr17 66000370 66000504 -29272147 - B1_Mur1 SINE Alu -7 142 16 1 1088 269 280 47 120 chr17 66000390 66000540 -29272111 - MT2B LTR ERVL -323 278 140 2 1088 268 329 0 12 chr17 66003949 66004035 -29268616 + C-rich Low_complexity Low_complexity 6 90 0 3 1088 207 214 0 0 chr17 66004951 66004993 -29267658 + T-rich Low_complexity Low_complexity 1 42 0 4 1088 528 315 28 42 chr17 66006648 66006860 -29265791 - Tigger7 DNA MER2_type -7 2484 2276 5 1088 296 228 34 112 chr17 66006859 66006948 -29265703 - Tigger7 DNA MER2_type -2375 116 35 5 1088 637 203 33 47 chr17 66008338 66008488 -29264163 - B1_Mur2 SINE Alu 0 149 2 6 1088 229 95 109 24 chr17 66008789 66008848 -29263803 + ID4_ SINE ID 9 80 -3 7 1088 189 0 0 0 chr17 66009075 66009096 -29263555 + (A)n Simple_repeat Simple_repeat 1 21 0 8 1088 544 318 84 18 chr17 66009131 66009416 -29263235 - L1MC2 LINE L1 -8 6336 6033 9 1088 251 228 0 0 chr17 66009426 66009483 -29263168 + T-rich Low_complexity Low_complexity 1 57 0 1 1088 1190 88 0 29 chr17 66009672 66009847 -29262804 - B2_Mm2 SINE B2 -24 171 2 1 1088 502 267 0 0 chr17 66009892 66009993 -29262658 + B1_Mur3 SINE Alu 3 103 -46 1 1088 472 294 0 101 chr17 66010019 66010088 -29262563 - RSINE1 SINE B4 -17 148 82 1 1088 621 182 6 164 chr17 66010088 66010181 -29262470 - B1_Mur2 SINE Alu 0 149 73 1 1088 1173 68 0 0 chr17 66010181 66010327 -29262324 - B1_Mus2 SINE Alu 0 147 2 1 1088 621 182 6 164 chr17 66010327 66010410 -29262241 - B1_Mur2 SINE Alu -77 72 1 1 1088 472 294 0 101 chr17 66010410 66010499 -29262152 - RSINE1 SINE B4 -84 81 6 1 1088 389 245 9 73 chr17 66010511 66010621 -29262030 - B3 SINE B2 0 216 114 1 1088 21 0 0 0 chr17 66011202 66011223 -29261428 + AT_rich Low_complexity Low_complexity 1 21 0 1 1088 1536 234 65 13 chr17 66011230 66011616 -29261035 + MTD LTR MaLR 13 418 -1 1 1088 251 310 134 20 chr17 66012203 66012404 -29260247 + MIR SINE MIR 27 250 -12 1 1088 955 236 55 55 chr17 66012499 66012755 -29259896 + MER2 DNA MER2_type 82 337 -8 2 1088 253 0 54 0 chr17 66013409 66013446 -29259205 + (CCCCCA)n Simple_repeat Simple_repeat 3 41 0 2 1088 868 250 0 42 chr17 66013766 66013958 -29258693 - ORR1E LTR MaLR -171 188 5 2 1088 21 0 0 0 chr17 66014704 66014725 -29257926 + AT_rich Low_complexity Low_complexity 1 21 0 2 1088 238 26 51 0 chr17 66014789 66014828 -29257823 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 2 1088 331 196 222 71 chr17 66014950 66014966 -29257685 + ID_B1 SINE B4 79 223 -1 2 1088 503 248 9 9 chr17 66014966 66015076 -29257575 + PB1D7 SINE Alu 10 119 -1 2 1088 21 36 0 0 chr17 66015076 66015104 -29257547 + AT_rich Low_complexity Low_complexity 1 28 0 2 1088 207 0 0 0 chr17 66016483 66016506 -29256145 + (CAG)n Simple_repeat Simple_repeat 1 23 0 2 1088 675 94 0 0 chr17 66016968 66017064 -29255587 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 2 1088 715 168 114 0 chr17 66017489 66017620 -29255031 + B1_Mur3 SINE Alu 3 148 -1 3 1088 287 222 12 0 chr17 66017622 66017703 -29254948 + G-rich Low_complexity Low_complexity 35 116 0 3 1088 478 293 136 47 chr17 66017858 66018183 -29254468 + MLT1A1 LTR MaLR 23 403 -5 3 1088 1288 167 148 117 chr17 66018437 66018789 -29253862 + ORR1D1 LTR MaLR 12 374 0 3 1088 272 172 207 0 chr17 66018789 66018874 -29253777 + MER2 DNA MER2_type 162 264 -81 3 1088 2559 140 17 7 chr17 66018869 66019287 -29253364 - RMER12 LTR ERVK -834 488 67 3 1088 257 235 202 10 chr17 66020129 66020228 -29252423 + MER57C2 LTR ERV1 42 159 -275 3 1088 1536 138 49 0 chr17 66020270 66020517 -29252134 + ORR1A4 LTR MaLR 71 329 0 3 1088 243 88 0 0 chr17 66020519 66020553 -29252098 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1088 672 296 129 47 chr17 66020774 66021178 -29251473 + MER21B LTR ERV1 326 762 -101 3 1088 456 19 0 0 chr17 66021339 66021392 -29251259 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1088 814 251 26 36 chr17 66021393 66021416 -29251235 - B3 SINE B2 -23 193 177 4 1088 8075 57 32 1 chr17 66021416 66022408 -29250243 + RLTR13D5 LTR ERVK 1 1023 0 4 1088 814 251 26 36 chr17 66022408 66022578 -29250073 - B3 SINE B2 -40 176 2 4 1088 188 294 132 21 chr17 66022602 66022734 -29249917 - L2a LINE L2 -9 3417 3232 4 1088 376 305 8 41 chr17 66023633 66023756 -29248895 - B1F SINE Alu -7 142 24 4 1088 276 30 0 0 chr17 66023771 66023804 -29248847 + (A)n Simple_repeat Simple_repeat 1 33 0 4 1088 1183 94 0 0 chr17 66025084 66025244 -29247407 + B2_Mm2 SINE B2 2 161 -34 4 1088 218 32 0 31 chr17 66025244 66025276 -29247375 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 4 1088 569 320 23 60 chr17 66026112 66026328 -29246323 + B4A SINE B4 2 209 -83 4 1088 217 255 0 29 chr17 66026381 66026486 -29246165 + (TTATA)n Simple_repeat Simple_repeat 4 105 0 4 1088 765 226 77 5 chr17 66026570 66026736 -29245915 + B3 SINE B2 1 177 -39 5 1088 440 0 36 0 chr17 66026736 66026791 -29245860 + (CATA)n Simple_repeat Simple_repeat 4 60 0 5 1088 765 226 77 5 chr17 66026791 66026820 -29245831 + B3 SINE B2 178 209 -7 5 1088 591 274 14 0 chr17 66027088 66027234 -29245417 + L1MC4a LINE L1 6660 6807 -1075 5 1088 238 264 0 53 chr17 66027277 66027353 -29245298 + L1MC4a LINE L1 6907 6978 -1017 5 1088 515 310 36 66 chr17 66027980 66028281 -29244370 - B4A SINE B4 0 292 1 5 1088 2382 135 2 23 chr17 66028379 66028772 -29243879 - Lx4A LINE L1 0 7058 6674 5 1088 288 349 53 7 chr17 66028791 66028941 -29243710 + L1M5 LINE L1 5300 5456 -784 5 1088 319 333 50 20 chr17 66029003 66029202 -29243449 + L1M5 LINE L1 5564 5768 -472 5 1088 424 72 29 0 chr17 66029921 66029990 -29242661 + (TA)n Simple_repeat Simple_repeat 2 72 0 5 1088 22 70 0 0 chr17 66030078 66030121 -29242530 + AT_rich Low_complexity Low_complexity 1 43 0 5 1088 371 21 21 0 chr17 66030432 66030480 -29242171 + (GGA)n Simple_repeat Simple_repeat 2 50 0 5 1088 312 35 34 34 chr17 66030671 66030730 -29241921 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 5 1088 1234 61 0 0 chr17 66030731 66030878 -29241773 - B1_Mm SINE Alu 0 147 1 6 1088 405 0 0 0 chr17 66031166 66031211 -29241440 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1088 464 303 21 79 chr17 66031945 66032235 -29240416 - Lx8 LINE L1 -2 7471 7199 6 1088 432 77 0 0 chr17 66032994 66033059 -29239592 + (CAGA)n Simple_repeat Simple_repeat 4 68 0 6 1088 330 26 0 0 chr17 66033447 66033486 -29239165 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1088 29691 85 10 2 chr17 66033808 66038553 -29234098 + L1_Mus1 LINE L1 1790 6567 0 6 1088 826 72 47 31 chr17 66038585 66038714 -29233937 + B2_Mm1t SINE B2 63 193 0 6 1088 435 258 75 102 chr17 66038735 66038921 -29233730 + B4A SINE B4 8 188 -104 6 1088 267 343 20 20 chr17 66038969 66038982 -29233669 + ID SINE ID 69 81 -143 6 1088 287 312 61 20 chr17 66038982 66039080 -29233571 + PB1D10 SINE Alu 1 102 -47 6 1088 637 254 8 0 chr17 66039098 66039228 -29233423 + RSINE1 SINE B4 4 134 -31 7 1088 536 268 26 66 chr17 66039289 66039441 -29233210 + ID_B1 SINE B4 78 223 -1 7 1088 1239 230 268 15 chr17 66039554 66040009 -29232642 + RMER15 LTR ERVL 6 575 0 7 1088 339 327 45 45 chr17 66040053 66040229 -29232422 - L1MD2 LINE L1 -303 6056 5881 7 1088 418 329 84 16 chr17 66040585 66040835 -29231816 - L1MD2 LINE L1 -468 5891 5625 7 1088 682 254 98 47 chr17 66040846 66041143 -29231508 - L1MD2 LINE L1 -1621 4525 4214 7 1088 347 230 182 13 chr17 66041159 66041313 -29231338 - MER113 DNA MER1_type -123 398 219 7 1088 477 0 0 0 chr17 66041332 66041385 -29231266 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 7 1088 343 262 26 61 chr17 66041430 66041544 -29231107 + B1F1 SINE Alu 18 127 -22 7 1088 276 260 27 99 chr17 66041556 66041667 -29230984 + BC1_Mm scRNA scRNA 12 114 -38 7 1088 434 321 77 36 chr17 66041754 66041948 -29230703 + B4A SINE B4 91 292 0 7 1088 299 163 0 0 chr17 66042044 66042093 -29230558 + L1M4 LINE L1 2705 2753 -3393 7 1088 599 248 78 0 chr17 66042103 66042256 -29230395 + RSINE1 SINE B4 1 165 0 8 1088 658 145 13 0 chr17 66042256 66042408 -29230243 + (TAGA)n Simple_repeat Simple_repeat 3 156 0 8 1088 378 0 0 0 chr17 66043175 66043217 -29229434 + (CA)n Simple_repeat Simple_repeat 2 43 0 8 1088 527 287 91 41 chr17 66043688 66044008 -29228643 + MER44A DNA MER2_type 1 336 -3 8 1088 882 115 160 24 chr17 66044083 66044252 -29228399 + B2_Mm2 SINE B2 3 194 -1 8 1088 258 243 14 28 chr17 66044628 66044700 -29227951 + MLT1A1 LTR MaLR 337 407 -1 8 1088 1239 41 0 7 chr17 66044822 66044971 -29227680 + B1_Mus1 SINE Alu 1 148 0 8 1088 253 125 0 35 chr17 66045434 66045492 -29227159 + (CA)n Simple_repeat Simple_repeat 2 57 0 8 1088 219 96 0 55 chr17 66045540 66045595 -29227056 + (CA)n Simple_repeat Simple_repeat 1 52 0 8 1088 1652 37 0 0 chr17 66045854 66046045 -29226606 - B2_Mm1a SINE B2 -1 192 2 8 1088 367 298 103 35 chr17 66046420 66046594 -29226057 - MER44B DNA MER2_type -12 538 353 8 1088 386 308 0 46 chr17 66046608 66046717 -29225934 - MER44B DNA MER2_type -447 103 1 8 1088 928 256 35 5 chr17 66046899 66047099 -29225552 + B3 SINE B2 6 211 -5 9 1088 26 30 0 0 chr17 66047952 66047985 -29224666 + AT_rich Low_complexity Low_complexity 1 33 0 9 1088 338 360 100 18 chr17 66048031 66048311 -29224340 + L1M5 LINE L1 5356 5658 -466 9 1088 414 319 73 37 chr17 66048405 66048623 -29224028 + MLT1A LTR MaLR 6 231 -143 9 1088 616 200 41 8 chr17 66048765 66048886 -29223765 + RSINE1 SINE B4 3 127 -38 9 1088 221 325 43 92 chr17 66048886 66048972 -29223679 + B3A SINE B2 2 198 0 9 1088 408 40 0 0 chr17 66050021 66050071 -29222580 + (TC)n Simple_repeat Simple_repeat 2 51 0 9 1088 722 43 254 8 chr17 66050071 66050189 -29222462 - B1_Mm SINE Alu 0 147 1 9 1088 1022 118 94 11 chr17 66050413 66050593 -29222058 - B2_Mm2 SINE B2 0 195 1 9 1088 231 36 0 0 chr17 66050633 66050661 -29221990 + (TG)n Simple_repeat Simple_repeat 2 29 0 9 1088 543 230 0 47 chr17 66050668 66050796 -29221855 - B3A SINE B2 -74 124 3 1 1088 303 28 0 0 chr17 66051087 66051123 -29221528 + (TC)n Simple_repeat Simple_repeat 1 36 0 1 1088 306 73 0 0 chr17 66051123 66051163 -29221488 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1088 287 230 13 39 chr17 66051163 66051240 -29221411 + CT-rich Low_complexity Low_complexity 1 75 0 1 1088 574 174 17 0 chr17 66052100 66052208 -29220443 + B1_Mur2 SINE Alu 4 119 -30 1 1088 710 204 14 14 chr17 66052220 66052359 -29220292 - B3 SINE B2 -67 149 11 1 1088 273 203 0 59 chr17 66052395 66052463 -29220188 + tRNA-Ala-GCY_ tRNA tRNA 1 64 -11 1 1088 189 147 0 0 chr17 66052465 66052499 -29220152 + (TAA)n Simple_repeat Simple_repeat 3 36 0 1 1088 312 188 0 0 chr17 66052504 66052568 -29220083 + GA-rich Low_complexity Low_complexity 2 65 0 1 1088 2388 192 62 37 chr17 66052861 66053379 -29219272 - RMER5 LTR ERV1 -3 531 1 1 1088 413 250 27 18 chr17 66053853 66053963 -29218688 - PB1D7 SINE Alu -6 114 4 1 1088 246 32 0 0 chr17 66054036 66054067 -29218584 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1088 637 241 204 33 chr17 66054889 66055134 -29217517 + MTC LTR MaLR 13 299 -122 1 1088 699 12 0 0 chr17 66056236 66056316 -29216335 + (GA)n Simple_repeat Simple_repeat 2 81 0 1 1088 257 272 51 40 chr17 66056706 66056877 -29215774 + L1_Mur3 LINE L1 1602 1775 -4102 1 1088 1083 254 106 112 chr17 66057207 66057687 -29214964 + MT2A LTR ERVL 1 477 -56 1 1088 433 301 89 37 chr17 66057879 66058148 -29214503 + L1MB8 LINE L1 4628 4910 -1236 1 1088 653 246 144 16 chr17 66058258 66058514 -29214137 + L1MB8 LINE L1 5485 5773 -411 1 1088 332 243 206 0 chr17 66058722 66058829 -29213822 - MTEa LTR MaLR -73 306 178 1 1088 521 252 25 25 chr17 66058823 66058941 -29213710 - B1_Mur1 SINE Alu -22 127 10 1 1088 631 239 78 0 chr17 66058946 66059088 -29213563 - MTEa LTR MaLR -226 153 1 1 1088 388 193 55 121 chr17 66059204 66059369 -29213282 + L1MB8 LINE L1 5784 5937 -241 1 1088 564 15 0 0 chr17 66059454 66059519 -29213132 + (GGA)n Simple_repeat Simple_repeat 1 65 0 1 1088 239 319 27 100 chr17 66059589 66059739 -29212912 + L1MB8 LINE L1 6016 6154 -24 1 1089 273 260 71 154 chr17 66061270 66061384 -29211267 + RLTR14 LTR ERV1 154 261 -121 1 1089 1099 117 179 11 chr17 66061384 66061574 -29211077 - URR1A DNA MER1_type 0 226 5 1 1089 273 260 71 154 chr17 66061574 66061641 -29211010 + RLTR14 LTR ERV1 262 320 -62 1 1089 937 179 0 0 chr17 66061641 66061786 -29210865 - B3A SINE B2 -46 152 8 1 1089 505 229 15 92 chr17 66061811 66061941 -29210710 - PB1D7 SINE Alu 0 120 1 1 1089 223 195 24 0 chr17 66062044 66062085 -29210566 - PB1 SINE Alu -68 59 18 1 1089 286 160 0 0 chr17 66062171 66062221 -29210430 + B3A SINE B2 1 50 -148 1 1089 272 319 136 27 chr17 66063437 66063621 -29209030 + MIR SINE MIR 23 226 -42 1 1089 1302 78 0 0 chr17 66063916 66064096 -29208555 + (GGA)n Simple_repeat Simple_repeat 1 180 0 1 1089 1254 63 0 6 chr17 66064170 66064329 -29208322 + B2_Mm2 SINE B2 1 158 -37 1 1089 327 49 0 0 chr17 66064330 66064371 -29208280 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 1 1089 1012 138 105 11 chr17 66064521 66064712 -29207939 + MTD LTR MaLR 5 213 -206 1 1089 591 281 208 22 chr17 66064742 66065059 -29207592 + L1_Rod LINE L1 80 455 -6717 1 1089 676 175 56 0 chr17 66065067 66065116 -29207535 + L1_Rod LINE L1 1387 1443 -4404 1 1089 333 0 0 0 chr17 66065116 66065153 -29207498 + (TAA)n Simple_repeat Simple_repeat 1 37 0 1 1089 676 175 56 0 chr17 66065153 66065246 -29207405 + L1_Rod LINE L1 1444 1536 -4311 1 1089 1003 208 287 0 chr17 66065326 66065594 -29207057 + Lx9 LINE L1 6547 6891 -753 1 1089 1341 63 23 0 chr17 66066033 66066208 -29206443 - B2_Mm1a SINE B2 -14 179 1 1 1089 711 171 94 20 chr17 66066291 66066440 -29206211 + Lx9 LINE L1 6892 7051 -593 1 1089 672 205 0 0 chr17 66066609 66066760 -29205891 + (TG)n Simple_repeat Simple_repeat 2 152 0 1 1089 2410 157 83 21 chr17 66067107 66067576 -29205075 + RLTR16 LTR ERVK 6 503 -2 1 1089 986 243 19 0 chr17 66067583 66067793 -29204858 + B3 SINE B2 3 216 0 1 1089 2489 130 66 0 chr17 66068070 66068463 -29204188 - MTC LTR MaLR 0 421 3 1 1089 1600 37 0 10 chr17 66068708 66068901 -29203750 + B2_Mm2 SINE B2 2 192 -3 1 1089 656 250 0 0 chr17 66068985 66069105 -29203546 + RSINE1 SINE B4 32 151 -14 1 1089 616 266 60 120 chr17 66069955 66070277 -29202374 + ORR1E LTR MaLR 43 370 0 1 1089 1571 38 0 16 chr17 66070301 66070490 -29202161 + B2_Mm1t SINE B2 2 187 -6 1 1089 259 220 135 22 chr17 66072167 66072259 -29200392 + MTEb LTR MaLR 257 365 -14 1 1089 620 279 76 33 chr17 66072314 66072525 -29200126 - ID_B1 SINE B4 -4 220 1 1 1089 188 0 0 69 chr17 66072538 66072567 -29200084 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 1 1089 710 270 5 58 chr17 66072573 66072781 -29199870 + B3 SINE B2 3 199 -17 1 1089 319 167 106 0 chr17 66072852 66072918 -29199733 + RSINE1 SINE B4 50 122 -43 1 1089 240 111 0 0 chr17 66073799 66073835 -29198816 + (CAGGG)n Simple_repeat Simple_repeat 3 38 0 1 1089 28 0 0 0 chr17 66073986 66074014 -29198637 + AT_rich Low_complexity Low_complexity 1 28 0 1 1089 726 78 26 0 chr17 66074016 66074131 -29198520 + (TCC)n Simple_repeat Simple_repeat 1 118 0 1 1089 218 167 0 310 chr17 66074217 66074300 -29198351 + PB1D9 SINE Alu 21 76 -44 1 1089 2457 111 133 105 chr17 66074300 66074596 -29198055 + RMER2 LTR ERV1 1 290 -277 1 1089 1139 89 0 0 chr17 66074596 66074742 -29197909 - B1_Mus2 SINE Alu 0 147 2 1 1089 2457 111 133 105 chr17 66074742 66074958 -29197693 + RMER2 LTR ERV1 291 527 -40 1 1089 295 180 16 47 chr17 66074977 66075041 -29197610 + B1_Mur3 SINE Alu 80 141 -8 1 1089 386 248 118 22 chr17 66075058 66075194 -29197457 + L1MEg LINE L1 1797 1945 -4139 1 1089 26 30 0 0 chr17 66075602 66075635 -29197016 + AT_rich Low_complexity Low_complexity 1 33 0 1 1089 182 105 26 0 chr17 66075965 66076003 -29196648 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1089 626 113 52 0 chr17 66076026 66076141 -29196510 + B1_Mus2 SINE Alu 27 147 0 1 1089 281 287 177 16 chr17 66076221 66076345 -29196306 - MIR3 SINE MIR -43 165 22 1 1089 455 286 80 28 chr17 66077184 66077360 -29195291 - Tigger5 DNA MER2_type -83 2323 2139 1 1089 1199 34 7 7 chr17 66078246 66078393 -29194258 + B1_Mm SINE Alu 1 147 0 1 1089 234 0 0 0 chr17 66078393 66078419 -29194232 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1089 189 0 0 0 chr17 66078489 66078510 -29194141 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1089 435 83 0 0 chr17 66078510 66078569 -29194082 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 1089 319 234 16 0 chr17 66078603 66078667 -29193984 - ID4_ SINE ID -6 77 13 1 1089 27 29 0 0 chr17 66078779 66078813 -29193838 + AT_rich Low_complexity Low_complexity 1 34 0 1 1089 1194 64 74 17 chr17 66078840 66079016 -29193635 - B2_Mm2 SINE B2 -9 186 1 1 1089 315 338 84 0 chr17 66079018 66079172 -29193479 - L1MEg LINE L1 -5144 940 774 1 1089 346 186 111 20 chr17 66079195 66079294 -29193357 - PB1D7 SINE Alu -7 113 6 1 1089 234 81 0 0 chr17 66079295 66079332 -29193319 + (C)n Simple_repeat Simple_repeat 1 37 0 1 1089 1390 77 39 0 chr17 66080178 66080360 -29192291 + B2_Mm2 SINE B2 3 191 -4 1 1089 321 47 0 0 chr17 66080361 66080404 -29192247 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 1089 236 208 21 0 chr17 66080761 66080809 -29191842 + (TCTG)n Simple_repeat Simple_repeat 4 52 0 1 1089 762 315 79 38 chr17 66081005 66081322 -29191329 - ORR1E LTR MaLR -6 353 24 1 1089 234 0 0 0 chr17 66082985 66083011 -29189640 + (TC)n Simple_repeat Simple_repeat 1 26 0 1 1089 234 0 0 0 chr17 66083011 66083036 -29189615 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1089 456 200 0 0 chr17 66083036 66083166 -29189485 + GA-rich Low_complexity Low_complexity 1 130 0 1 1089 1322 68 17 6 chr17 66083889 66084066 -29188585 + B2_Mm1t SINE B2 3 181 -12 1 1089 444 72 31 3 chr17 66084077 66084173 -29188478 + B2_Mm2 SINE B2 47 181 -14 1 1089 292 314 132 0 chr17 66084525 66084729 -29187922 + L1MA6 LINE L1 6025 6255 -45 1 1089 371 68 17 0 chr17 66085227 66085286 -29187365 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 1089 1490 54 11 5 chr17 66085314 66085500 -29187151 + B2_Mm2 SINE B2 1 187 -8 1 1089 618 211 206 54 chr17 66085507 66085783 -29186868 - L1MB5 LINE L1 -8 6166 5849 1 1089 386 212 80 10 chr17 66085891 66086010 -29186641 - L1MB5 LINE L1 -375 5799 5673 1 1089 237 209 0 0 chr17 66086044 66086087 -29186564 - PB1D9 SINE Alu -77 43 1 1 1089 851 125 7 35 chr17 66086295 66086436 -29186215 + B1_Mur4 SINE Alu 13 149 -1 1 1089 552 245 24 42 chr17 66086668 66086834 -29185817 + RSINE1 SINE B4 3 165 0 1 1089 1325 105 10 10 chr17 66087525 66087718 -29184933 + B2_Mm2 SINE B2 2 194 -1 1 1089 452 150 62 0 chr17 66087938 66088018 -29184633 - B1F SINE Alu 0 149 65 1 1089 217 170 43 0 chr17 66088019 66088066 -29184585 - B1_Mm SINE Alu -30 117 69 1 1089 335 222 40 136 chr17 66088047 66088172 -29184479 - B1F SINE Alu -31 118 6 1 1089 25 0 0 0 chr17 66088198 66088223 -29184428 + AT_rich Low_complexity Low_complexity 1 25 0 1 1089 1190 50 0 0 chr17 66088524 66088664 -29183987 + B1_Mus2 SINE Alu 2 141 -6 1 1089 537 16 0 0 chr17 66088669 66088731 -29183920 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 1 1089 288 0 0 0 chr17 66090213 66090245 -29182406 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 1089 462 275 0 9 chr17 66090489 66090599 -29182052 + PB1 SINE Alu 17 125 -2 1 1089 1366 155 3 27 chr17 66090644 66090941 -29181710 - RMER6A LTR ERVK -425 331 1 1 1089 1171 290 173 47 chr17 66090972 66091632 -29181019 - MER21B LTR ERV1 -120 743 1 1 1089 1372 187 139 78 chr17 66093069 66093464 -29179187 + MTD LTR MaLR 1 419 0 1 1089 390 21 0 0 chr17 66093774 66093821 -29178830 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 1089 745 310 42 42 chr17 66094153 66094463 -29178188 + MTE2a LTR MaLR 55 364 -15 2 1089 261 237 38 38 chr17 66094500 66094579 -29178072 + ID4_ SINE ID 2 80 -3 2 1089 250 279 0 37 chr17 66095166 66095178 -29177473 - ID4 SINE ID -3 80 69 2 1089 192 77 0 0 chr17 66095178 66095204 -29177447 + (TGG)n Simple_repeat Simple_repeat 1 26 0 2 1089 250 279 0 37 chr17 66095204 66095273 -29177378 - ID4 SINE ID -15 68 3 2 1089 794 233 23 11 chr17 66096284 66096458 -29176193 + B4A SINE B4 110 285 -7 2 1089 1228 97 17 0 chr17 66096622 66096797 -29175854 + B2_Mm1a SINE B2 10 187 -6 2 1089 240 163 0 0 chr17 66096802 66096845 -29175806 + GA-rich Low_complexity Low_complexity 2 44 0 2 1089 264 286 68 45 chr17 66097031 66097119 -29175532 + ID_B1 SINE B4 66 155 -69 2 1089 1349 93 10 10 chr17 66097120 66097315 -29175336 + B2_Mm2 SINE B2 1 195 0 2 1089 501 170 42 11 chr17 66097349 66097444 -29175207 + ID_B1 SINE B4 121 218 -6 2 1089 815 194 31 8 chr17 66097664 66097845 -29174806 + B3 SINE B2 1 195 0 2 1089 331 271 41 10 chr17 66097940 66098037 -29174614 + B1F1 SINE Alu 2 101 -48 2 1089 1595 37 11 0 chr17 66098886 66099077 -29173574 + B2_Mm1t SINE B2 1 193 0 2 1089 739 199 240 0 chr17 66099770 66099941 -29172710 - B3 SINE B2 -3 213 2 2 1089 633 161 146 0 chr17 66100017 66100147 -29172504 + B1_Mur3 SINE Alu 1 149 0 2 1089 244 61 39 39 chr17 66100152 66100203 -29172448 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 2 1089 364 320 45 52 chr17 66100487 66100642 -29172009 - MER21B LTR ERV1 -213 650 497 2 1089 917 289 88 26 chr17 66100746 66101052 -29171599 - MER21B LTR ERV1 -538 325 1 2 1089 989 100 0 62 chr17 66101327 66101487 -29171164 + B1_Mur4 SINE Alu 1 150 0 2 1089 383 138 193 36 chr17 66101491 66101574 -29171077 + B1_Mur2 SINE Alu 54 149 0 2 1089 1447 70 0 11 chr17 66102176 66102364 -29170287 + B2_Mm2 SINE B2 2 187 -8 2 1089 448 198 70 11 chr17 66102373 66102484 -29170167 + PB1D10 SINE Alu 1 117 0 2 1089 545 246 33 112 chr17 66102599 66102814 -29169837 - B3A SINE B2 0 198 1 2 1089 398 345 31 112 chr17 66103559 66103801 -29168850 + ORR1E LTR MaLR 12 230 -140 2 1089 776 256 14 58 chr17 66104508 66104715 -29167936 + B3A SINE B2 1 198 0 2 1089 26 0 0 0 chr17 66104825 66104851 -29167800 + AT_rich Low_complexity Low_complexity 1 26 0 2 1089 1791 153 9 190 chr17 66104867 66105319 -29167332 + ORR1D1 LTR MaLR 5 374 0 2 1089 200 267 22 4 chr17 66105410 66105468 -29167183 + MIRc SINE MIR 111 168 -94 2 1089 250 307 45 0 chr17 66105526 66105614 -29167037 + PB1D10 SINE Alu 6 97 -20 2 1089 234 0 0 0 chr17 66105627 66105653 -29166998 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2 1089 2323 91 18 6 chr17 66105659 66105992 -29166659 - Lx3B LINE L1 -4 6969 6633 2 1089 296 365 44 63 chr17 66105994 66106199 -29166452 + MLT1H1 LTR MaLR 10 210 -345 2 1089 560 111 11 0 chr17 66106298 66106388 -29166263 + (TAGA)n Simple_repeat Simple_repeat 3 93 0 2 1089 329 172 62 15 chr17 66106777 66106842 -29165809 - ID4_ SINE ID -11 72 5 2 1089 249 57 0 0 chr17 66106863 66106898 -29165753 + (T)n Simple_repeat Simple_repeat 1 35 0 2 1089 1431 79 5 5 chr17 66106922 66107112 -29165539 - B2_Mm2 SINE B2 -5 190 1 2 1089 391 286 69 38 chr17 66107124 66107255 -29165396 - ID_B1 SINE B4 -8 216 82 2 1089 2221 114 6 0 chr17 66107432 66107749 -29164902 + ORR1A2 LTR MaLR 1 319 -8 2 1089 258 218 123 52 chr17 66107708 66107863 -29164788 + MER2 DNA MER2_type 116 281 -64 2 1089 453 36 0 0 chr17 66109215 66109270 -29163381 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 1089 211 294 182 0 chr17 66109652 66109778 -29162873 + BC1_Mm scRNA scRNA 2 150 -2 2 1089 279 54 0 0 chr17 66109922 66109959 -29162692 + (TTTTC)n Simple_repeat Simple_repeat 4 40 0 2 1089 1180 48 0 26 chr17 66109991 66110142 -29162509 - B1_Mus1 SINE Alu 0 148 2 2 1089 310 282 92 63 chr17 66110348 66110522 -29162129 + MTEa LTR MaLR 201 379 0 2 1089 445 62 30 40 chr17 66110561 66110662 -29161989 + (TTTTG)n Simple_repeat Simple_repeat 1 100 0 2 1089 815 216 31 71 chr17 66110758 66110896 -29161755 + B3 SINE B2 2 137 -79 2 1089 1213 41 7 0 chr17 66110896 66111041 -29161610 + B1_Mus1 SINE Alu 2 147 -1 2 1089 815 216 31 71 chr17 66111041 66111126 -29161525 + B3 SINE B2 138 216 0 2 1089 1132 172 12 87 chr17 66111239 66111481 -29161170 - ORR1B2 LTR MaLR -143 224 1 2 1089 362 327 29 10 chr17 66111483 66111585 -29161066 + RSINE1 SINE B4 16 119 -46 2 1089 1084 103 21 70 chr17 66111585 66111772 -29160879 + B2_Mm1t SINE B2 1 178 -15 2 1089 299 146 0 18 chr17 66111822 66111878 -29160773 + B2_Mm2 SINE B2 47 101 -94 2 1089 216 111 0 0 chr17 66111894 66111930 -29160721 + (CATA)n Simple_repeat Simple_repeat 4 39 0 2 1089 667 33 22 0 chr17 66112005 66112095 -29160556 + (CA)n Simple_repeat Simple_repeat 2 93 0 2 1089 919 291 123 69 chr17 66112262 66112745 -29159906 + MT2A LTR ERVL 2 517 -16 2 1089 879 144 192 56 chr17 66112745 66112863 -29159788 + URR1B DNA MER1_type 1 155 -70 2 1089 1641 21 0 54 chr17 66112863 66113067 -29159584 + B2_Mm1a SINE B2 1 193 0 2 1089 879 144 192 56 chr17 66113067 66113146 -29159505 + URR1B DNA MER1_type 156 225 0 2 1089 919 291 123 69 chr17 66113146 66113167 -29159484 + MT2A LTR ERVL 518 533 0 2 1089 229 250 65 13 chr17 66113364 66113441 -29159210 + L1MC4 LINE L1 7495 7575 -467 2 1089 644 153 20 9 chr17 66113441 66113562 -29159089 + B1_Mus2 SINE Alu 3 119 -1 2 1089 3950 172 108 12 chr17 66113838 66114607 -29158044 + Lx5 LINE L1 6203 7045 -5 2 1089 1254 109 17 0 chr17 66114610 66114785 -29157866 + B2_Mm2 SINE B2 3 180 -15 2 1089 39 60 0 0 chr17 66114798 66114865 -29157786 + AT_rich Low_complexity Low_complexity 1 67 0 2 1089 1681 224 159 37 chr17 66114874 66115357 -29157294 + MTD-int LTR MaLR 717 1258 0 2 1089 1948 168 137 0 chr17 66115359 66115723 -29156928 + MTD LTR MaLR 3 416 -3 2 1089 2363 96 16 3 chr17 66115724 66116047 -29156604 - ORR1A2 LTR MaLR 0 327 1 2 1089 724 325 15 50 chr17 66116048 66116307 -29156344 + MTE-int LTR MaLR 1007 1256 -324 2 1089 808 218 14 0 chr17 66116297 66116444 -29156207 - B1_Mur2 SINE Alu 0 149 1 2 1089 249 314 0 85 chr17 66116360 66116454 -29156197 - MT2B2 LTR ERVL -344 240 155 2 1089 191 32 65 0 chr17 66116454 66116485 -29156166 + (TTTG)n Simple_repeat Simple_repeat 3 35 0 2 1089 1188 57 0 0 chr17 66116494 66116635 -29156016 - B1_Mus2 SINE Alu -5 142 2 2 1089 266 204 7 236 chr17 66116639 66116787 -29155864 + MTC-int LTR MaLR 945 1058 -200 2 1089 263 232 60 24 chr17 66116800 66116884 -29155767 + MTD LTR MaLR 293 419 0 2 1089 949 74 22 35 chr17 66119679 66120151 -29152500 + (CA)n Simple_repeat Simple_repeat 1 465 0 2 1089 214 191 0 0 chr17 66122844 66122886 -29149765 + ID SINE ID 9 50 -174 2 1089 880 80 0 74 chr17 66123023 66123158 -29149493 - B2_Mm2 SINE B2 -68 127 3 2 1089 506 157 104 118 chr17 66123188 66123360 -29149291 - B2_Mm2 SINE B2 -10 206 5 2 1089 270 81 0 0 chr17 66124325 66124362 -29148289 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 2 1089 515 232 56 35 chr17 66124371 66124514 -29148137 - B1F SINE Alu -3 146 1 2 1089 1308 7 0 0 chr17 66124655 66124800 -29147851 + B1_Mus2 SINE Alu 3 147 0 2 1089 257 65 0 61 chr17 66124800 66124849 -29147802 + (A)n Simple_repeat Simple_repeat 1 46 0 2 1089 684 131 146 51 chr17 66125079 66125216 -29147435 + B1_Mur4 SINE Alu 1 150 0 2 1089 2984 64 36 19 chr17 66125434 66125848 -29146803 - BGLII LTR ERVK 0 421 1 2 1089 1118 192 70 70 chr17 66126041 66126354 -29146297 + RLTR20C LTR ERVK 1 313 -221 2 1089 493 244 139 15 chr17 66126350 66126404 -29146247 + RLTR20C LTR ERVK 423 490 -88 2 1089 195 69 0 0 chr17 66126404 66126433 -29146218 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 2 1089 493 244 139 15 chr17 66126433 66126515 -29146136 + RLTR20C LTR ERVK 491 575 -3 2 1089 1933 146 58 83 chr17 66126515 66126676 -29145975 - ORR1B1 LTR MaLR -9 385 225 2 1089 441 0 0 0 chr17 66126676 66126725 -29145926 + (TTTC)n Simple_repeat Simple_repeat 2 50 0 2 1089 1134 64 0 14 chr17 66126728 66126871 -29145780 - B1_Mus2 SINE Alu -6 141 1 2 1089 1933 146 58 83 chr17 66126871 66127100 -29145551 - ORR1B1 LTR MaLR -170 224 1 2 1089 1606 52 0 0 chr17 66128293 66128486 -29144165 + B2_Mm1a SINE B2 1 193 0 2 1089 682 277 0 0 chr17 66128547 66128695 -29143956 + RSINE1 SINE B4 2 149 -16 2 1089 252 175 0 0 chr17 66128916 66128956 -29143695 - MTEa LTR MaLR -237 142 103 2 1089 354 260 52 0 chr17 66129717 66129813 -29142838 + RMER15 LTR ERVL 403 503 -72 2 1089 450 241 34 8 chr17 66130405 66130522 -29142129 + PB1D9 SINE Alu 1 120 0 2 1089 302 300 50 0 chr17 66130545 66130625 -29142026 + B4 SINE B4 1 84 -208 2 1089 578 146 139 47 chr17 66130665 66130794 -29141857 - B1_Mur3 SINE Alu 0 149 9 2 1089 287 242 47 75 chr17 66130709 66130816 -29141835 - MT2B2 LTR ERVL -327 257 154 2 1089 265 284 135 0 chr17 66130797 66130871 -29141780 + B4 SINE B4 140 223 -69 2 1089 2218 136 264 9 chr17 66131124 66131590 -29141061 + RMER4B LTR ERVK 1 585 0 2 1089 23 68 0 0 chr17 66132367 66132411 -29140240 + GC_rich Low_complexity Low_complexity 1 44 0 2 1089 22 35 0 0 chr17 66132444 66132473 -29140178 + GC_rich Low_complexity Low_complexity 1 29 0 2 1089 26 30 0 0 chr17 66132560 66132593 -29140058 + GC_rich Low_complexity Low_complexity 1 33 0 2 1089 218 42 83 0 chr17 66132594 66132642 -29140009 + (CGGG)n Simple_repeat Simple_repeat 3 54 0 2 1089 50 31 0 0 chr17 66132649 66132713 -29139938 + GC_rich Low_complexity Low_complexity 1 64 0 2 1089 222 37 0 0 chr17 66132810 66132837 -29139814 + (CGG)n Simple_repeat Simple_repeat 2 28 0 2 1089 49 32 0 0 chr17 66132864 66132927 -29139724 + GC_rich Low_complexity Low_complexity 1 63 0 3 1089 21 57 0 0 chr17 66133104 66133139 -29139512 + GC_rich Low_complexity Low_complexity 1 35 0 3 1089 1092 214 164 30 chr17 66134137 66134508 -29138143 - MTC LTR MaLR 0 421 1 3 1089 4444 114 28 21 chr17 66134818 66135632 -29137019 - RLTR13D2 LTR ERVK 0 1023 2 3 1089 975 158 107 48 chr17 66136455 66136661 -29135990 - URR1B DNA MER1_type 0 225 8 3 1089 713 205 129 21 chr17 66137718 66137912 -29134739 + B3 SINE B2 2 216 0 3 1089 21 36 0 0 chr17 66138267 66138295 -29134356 + AT_rich Low_complexity Low_complexity 1 28 0 3 1089 291 114 0 0 chr17 66138302 66138346 -29134305 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1089 660 277 44 28 chr17 66138573 66138755 -29133896 + B3 SINE B2 1 185 -31 3 1089 301 208 184 57 chr17 66139518 66139660 -29132991 - L1M4 LINE L1 -2129 4017 3858 3 1089 1186 61 0 0 chr17 66139660 66139807 -29132844 - B1_Mus2 SINE Alu 0 147 1 3 1089 301 208 184 57 chr17 66139807 66139822 -29132829 - L1M4 LINE L1 -2289 3857 3841 3 1089 3323 40 0 10 chr17 66140025 66140425 -29132226 - MTA_Mm LTR MaLR 0 396 1 3 1089 322 291 97 86 chr17 66140736 66141029 -29131622 - MER2 DNA MER2_type -11 334 5 3 1089 233 200 133 0 chr17 66141095 66141155 -29131496 + RSINE1 SINE B4 7 74 -91 3 1089 247 197 81 16 chr17 66141535 66141597 -29131054 + BC1_Mm scRNA scRNA 5 70 -82 3 1089 418 310 72 52 chr17 66141544 66141607 -29131044 + ID SINE ID 18 84 -140 3 1089 252 0 0 0 chr17 66141607 66141635 -29131016 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 1089 418 310 72 52 chr17 66141635 66141765 -29130886 + ID_B1 SINE B4 85 215 -9 3 1089 526 226 103 16 chr17 66141650 66141776 -29130875 + B1_Mur2 SINE Alu 13 149 0 3 1089 242 283 106 48 chr17 66141786 66141890 -29130761 + Charlie20a DNA Charlie 659 768 -39 3 1089 332 266 106 0 chr17 66142616 66142729 -29129922 - B1F SINE Alu -4 145 21 3 1089 1422 76 5 0 chr17 66143159 66143343 -29129308 + B2_Mm1a SINE B2 2 186 -7 3 1089 407 230 97 41 chr17 66143355 66143402 -29129249 - MT2A LTR ERVL -8 525 477 3 1089 190 0 67 0 chr17 66143402 66143432 -29129219 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1089 407 230 97 41 chr17 66143432 66143529 -29129122 - MT2A LTR ERVL -57 476 374 3 1089 232 191 21 0 chr17 66143724 66143818 -29128833 + (CATCC)n Simple_repeat Simple_repeat 1 96 0 3 1089 693 259 78 11 chr17 66143893 66144084 -29128567 - Lx8 LINE L1 -252 7221 7018 3 1089 345 319 36 22 chr17 66144084 66144106 -29128545 - B3A SINE B2 -57 141 121 3 1089 2765 112 176 49 chr17 66144106 66144639 -29128012 + MT2B LTR ERVL 1 601 0 3 1089 345 319 36 22 chr17 66144639 66144754 -29127897 - B3A SINE B2 -78 120 2 3 1089 260 248 84 84 chr17 66144800 66144919 -29127732 - MTC LTR MaLR -289 132 14 3 1089 1312 76 23 0 chr17 66144948 66145120 -29127531 - B2_Mm2 SINE B2 -19 176 1 3 1089 1287 20 0 0 chr17 66145214 66145361 -29127290 - B1_Mus2 SINE Alu 0 147 1 3 1089 243 246 15 0 chr17 66145436 66145501 -29127150 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 1089 265 235 73 0 chr17 66145504 66145572 -29127079 - B4A SINE B4 -70 222 150 3 1089 992 53 122 0 chr17 66145749 66145880 -29126771 - B1_Mm SINE Alu 0 147 1 3 1089 245 214 125 10 chr17 66145880 66145984 -29126667 + Charlie2b DNA MER1_type 2392 2507 -275 3 1089 183 42 0 0 chr17 66146175 66146199 -29126452 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 3 1089 323 257 83 37 chr17 66146344 66146453 -29126198 - B1_Mm SINE Alu -23 124 11 3 1089 232 292 79 55 chr17 66146453 66146468 -29126183 - B4 SINE B4 -84 205 79 3 1089 229 243 213 13 chr17 66146849 66146924 -29125727 + PB1D7 SINE Alu 1 90 -30 3 1089 321 165 90 45 chr17 66147345 66147434 -29125217 - B1F SINE Alu -28 121 29 3 1089 260 265 71 12 chr17 66147426 66147510 -29125141 + B1F SINE Alu 61 149 0 3 1089 378 305 152 26 chr17 66147560 66147824 -29124827 - L1MDa LINE L1 -4048 2585 2292 3 1089 326 309 101 22 chr17 66147904 66148043 -29124608 + RSINE1 SINE B4 11 160 -5 3 1089 1105 102 0 7 chr17 66148165 66148313 -29124338 - B1_Mus1 SINE Alu 0 148 2 3 1089 213 204 23 0 chr17 66148342 66148386 -29124265 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1089 302 182 197 0 chr17 66148540 66148606 -29124045 - B1_Mm SINE Alu 0 147 69 3 1089 436 252 50 0 chr17 66148748 66148847 -29123804 + PB1D10 SINE Alu 6 109 -8 3 1089 251 250 37 28 chr17 66149554 66149661 -29122990 - L1MEc LINE L1 -3922 2397 2290 3 1089 546 291 157 65 chr17 66150164 66150190 -29122461 - L1MEc LINE L1 -4802 1598 1570 3 1089 435 241 222 6 chr17 66150190 66150357 -29122294 - B3 SINE B2 -12 204 2 3 1089 546 291 157 65 chr17 66150357 66150595 -29122056 - L1MEc LINE L1 -4831 1569 1302 3 1089 942 84 209 19 chr17 66150595 66150753 -29121898 - B2_Mm2 SINE B2 -6 189 2 3 1089 546 291 157 65 chr17 66150753 66150821 -29121830 - L1MEc LINE L1 -5099 1301 1238 3 1089 1291 71 48 21 chr17 66150821 66151008 -29121643 + B2_Mm2 SINE B2 1 192 -3 3 1089 546 291 157 65 chr17 66151008 66151165 -29121486 - L1MEc LINE L1 -5163 1237 1063 3 1089 683 128 16 64 chr17 66151929 66152054 -29120597 - B1_Mur2 SINE Alu 0 149 31 3 1089 554 153 86 99 chr17 66152094 66152107 -29120544 - B1_Mur4 SINE Alu 0 150 141 3 1089 249 57 0 0 chr17 66152107 66152142 -29120509 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1089 554 153 86 99 chr17 66152142 66152280 -29120371 - B1_Mur4 SINE Alu -10 140 1 3 1089 768 140 0 17 chr17 66153783 66153899 -29118752 - B1_Mur3 SINE Alu -19 130 17 3 1089 316 330 50 10 chr17 66153809 66153910 -29118741 - B4A SINE B4 -99 193 89 3 1089 343 354 19 65 chr17 66153976 66154130 -29118521 + B1F SINE Alu 1 147 -2 3 1089 1698 31 0 0 chr17 66154150 66154342 -29118309 - B2_Mm1a SINE B2 0 193 2 3 1089 229 146 0 0 chr17 66154369 66154417 -29118234 - L1MB3 LINE L1 -1 6182 6135 3 1089 419 325 102 30 chr17 66154433 66154668 -29117983 - B4A SINE B4 0 292 41 3 1089 1297 82 0 0 chr17 66154679 66154849 -29117802 - B2_Mm2 SINE B2 -24 171 2 3 1089 1595 212 116 66 chr17 66155777 66156397 -29116254 - RMER6A LTR ERVK -105 651 1 3 1089 36 0 0 0 chr17 66156875 66156911 -29115740 + AT_rich Low_complexity Low_complexity 1 36 0 3 1089 282 250 107 76 chr17 66157856 66158148 -29114503 - L1M5 LINE L1 -598 5581 5272 3 1089 234 150 0 0 chr17 66158324 66158364 -29114287 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1089 470 276 118 7 chr17 66158434 66158587 -29114064 - B2_Mm2 SINE B2 -23 172 3 3 1089 483 18 0 0 chr17 66159221 66159277 -29113374 + (TTTTC)n Simple_repeat Simple_repeat 4 59 0 3 1089 762 67 244 0 chr17 66159277 66159385 -29113266 - B1_Mus1 SINE Alu -10 138 2 3 1089 860 174 28 7 chr17 66160382 66160527 -29112124 - B1_Mus1 SINE Alu 0 148 1 3 1089 366 211 84 28 chr17 66161059 66161128 -29111523 - L1MB5 LINE L1 -8 6166 6090 3 1089 2709 43 3 44 chr17 66161128 66161469 -29111182 - ORR1A2 LTR MaLR 0 327 1 3 1089 366 211 84 28 chr17 66161469 66161506 -29111145 - L1MB5 LINE L1 -85 6089 6054 3 1089 284 249 180 35 chr17 66161940 66162140 -29110511 - L1MD LINE L1 -1755 4391 4163 3 1089 459 0 0 0 chr17 66162425 66162476 -29110175 + (CTG)n Simple_repeat Simple_repeat 3 53 0 3 1089 531 171 162 0 chr17 66162484 66162589 -29110062 - B1_Mur3 SINE Alu -8 141 20 3 1089 997 92 26 26 chr17 66163840 66163996 -29108655 - B2_Mm2 SINE B2 -13 182 27 3 1089 232 170 170 0 chr17 66164019 66164072 -29108579 - B3 SINE B2 -5 211 150 3 1089 678 280 46 15 chr17 66164090 66164286 -29108365 - B3 SINE B2 -13 203 2 3 1089 334 250 10 42 chr17 66164315 66164411 -29108240 + MT2B LTR ERVL 167 259 -342 3 1089 622 165 104 0 chr17 66164325 66164440 -29108211 + B1_Mus2 SINE Alu 12 138 -9 3 1089 2274 47 0 4 chr17 66164562 66164838 -29107813 - L1_Mus1 LINE L1 0 6567 6293 3 1089 324 226 139 0 chr17 66164943 66165038 -29107613 + PB1D9 SINE Alu 3 107 -13 3 1089 1256 92 21 16 chr17 66165780 66165967 -29106684 - B2_Mm2 SINE B2 -6 189 2 3 1089 216 0 0 0 chr17 66166373 66166397 -29106254 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1089 1297 87 27 21 chr17 66166535 66166723 -29105928 - B2_Mm2 SINE B2 -6 189 1 3 1089 301 312 46 72 chr17 66167433 66167624 -29105027 - B3A SINE B2 -14 202 2 3 1089 3324 51 2 2 chr17 66167808 66168204 -29104447 + MTA_Mm LTR MaLR 1 396 0 3 1089 251 282 70 0 chr17 66168266 66168337 -29104314 + ID4 SINE ID 5 80 -3 3 1089 252 98 36 89 chr17 66168836 66168892 -29103759 - B1_Mur4 SINE Alu 0 150 98 3 1089 345 245 39 10 chr17 66169273 66169376 -29103275 - PB1D10 SINE Alu -11 106 1 3 1089 518 15 0 0 chr17 66169542 66169608 -29103043 + L1_Mus2 LINE L1 6501 6566 0 3 1089 335 241 25 0 chr17 66170512 66170591 -29102060 + B3 SINE B2 1 81 -135 3 1089 1330 95 21 0 chr17 66171370 66171560 -29101091 - B2_Mm2 SINE B2 0 195 2 3 1089 596 199 60 15 chr17 66171881 66172014 -29100637 - B1_Mm SINE Alu -8 139 1 3 1089 1069 251 17 17 chr17 66172248 66172483 -29100168 - B4A SINE B4 0 292 58 3 1089 1203 55 0 7 chr17 66172825 66172973 -29099678 - B1_Mus2 SINE Alu 0 147 1 3 1089 678 191 247 6 chr17 66173166 66173340 -29099311 - B3 SINE B2 0 216 1 3 1089 665 90 90 7 chr17 66174442 66174587 -29098064 - RMER17B LTR ERVK -494 464 308 3 1089 637 183 118 30 chr17 66174849 66174984 -29097667 + B1_Mur1 SINE Alu 3 149 0 3 1089 357 206 113 52 chr17 66175191 66175288 -29097363 - PB1D7 SINE Alu -1 119 17 3 1089 291 54 0 0 chr17 66177489 66177526 -29095125 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 1089 380 263 105 0 chr17 66177576 66177690 -29094961 - Lx8 LINE L1 -213 7260 7135 3 1089 975 93 152 12 chr17 66178108 66178272 -29094379 + B2_Mm2 SINE B2 2 188 -7 4 1089 549 0 0 0 chr17 66179438 66179499 -29093152 + (TC)n Simple_repeat Simple_repeat 2 62 0 4 1089 784 238 40 25 chr17 66179899 66180097 -29092554 - B3 SINE B2 -3 213 13 4 1089 307 255 31 41 chr17 66180639 66180737 -29091914 - B1F SINE Alu 0 149 53 4 1089 724 86 54 8 chr17 66180970 66181099 -29091552 - L1_Mus3 LINE L1 -6 6632 6498 4 1089 293 289 42 50 chr17 66181487 66181607 -29091044 - PB1D7 SINE Alu -1 119 1 4 1089 340 219 70 79 chr17 66181652 66181766 -29090885 - PB1D10 SINE Alu 0 117 5 4 1089 685 246 7 14 chr17 66181966 66182037 -29090614 - B4A SINE B4 -4 288 218 4 1089 351 0 0 0 chr17 66182037 66182076 -29090575 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1089 685 246 7 14 chr17 66182076 66182152 -29090499 - B4A SINE B4 -75 217 143 4 1089 21 0 0 0 chr17 66182518 66182539 -29090112 + AT_rich Low_complexity Low_complexity 1 21 0 4 1089 1249 84 67 0 chr17 66183523 66183702 -29088949 + B2_Mm2 SINE B2 2 192 -3 4 1089 1045 60 0 0 chr17 66183710 66183844 -29088807 + B1_Mus2 SINE Alu 14 147 0 4 1089 665 189 0 57 chr17 66183937 66184077 -29088574 - B1_Mur1 SINE Alu 0 149 18 4 1089 528 213 46 30 chr17 66185907 66186038 -29086613 - B3 SINE B2 -3 213 81 4 1089 1666 31 0 0 chr17 66186771 66186964 -29085687 - B2_Mm1a SINE B2 0 193 1 4 1089 277 241 167 33 chr17 66187609 66187699 -29084952 + ID_B1 SINE B4 41 142 -82 4 1089 1430 85 37 0 chr17 66187775 66187963 -29084688 + B2_Mm2 SINE B2 1 195 0 4 1089 577 189 106 70 chr17 66188346 66188488 -29084163 + B1_Mus1 SINE Alu 2 148 0 4 1089 631 286 98 5 chr17 66188602 66188806 -29083845 + B4 SINE B4 6 228 -64 4 1089 2381 134 47 13 chr17 66188823 66189209 -29083442 - MTB_Mm LTR MaLR -8 399 1 4 1089 201 74 0 0 chr17 66189670 66189697 -29082954 + (TCTTG)n Simple_repeat Simple_repeat 2 28 0 4 1089 671 157 114 43 chr17 66189697 66189826 -29082825 - B1_Mur4 SINE Alu -10 140 1 4 1090 1035 251 181 72 chr17 66191429 66192026 -29080625 - MTD-int LTR MaLR -578 680 19 4 1090 607 247 276 6 chr17 66192043 66192366 -29080285 - MTD LTR MaLR -2 417 8 4 1090 441 246 47 14 chr17 66192413 66192590 -29080061 - MTD LTR MaLR -156 265 1 4 1090 509 267 85 28 chr17 66192889 66193101 -29079550 - RMER5 LTR ERV1 -7 527 304 4 1090 451 297 54 15 chr17 66194139 66194344 -29078307 + Lx9 LINE L1 5747 5959 -1685 4 1090 833 270 168 39 chr17 66194387 66194469 -29078182 + Lx9 LINE L1 6180 6260 -1384 4 1090 359 198 147 10 chr17 66194469 66194571 -29078080 + PB1D9 SINE Alu 1 116 -4 4 1090 833 285 187 30 chr17 66194571 66195326 -29077325 + Lx9 LINE L1 6261 7023 -450 4 1090 260 196 18 18 chr17 66195473 66195530 -29077121 + B4A SINE B4 232 288 -4 4 1090 276 30 0 0 chr17 66196440 66196473 -29076178 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1090 744 69 21 93 chr17 66196492 66196685 -29075966 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 1090 534 126 16 82 chr17 66196740 66196922 -29075729 + (TG)n Simple_repeat Simple_repeat 1 170 0 4 1090 544 286 54 97 chr17 66196922 66197181 -29075470 - B4A SINE B4 0 292 45 4 1090 438 158 19 103 chr17 66200293 66200409 -29072242 - B1_Mus2 SINE Alu 0 120 16 4 1090 232 305 154 87 chr17 66200298 66200506 -29072145 - B4 SINE B4 -70 222 1 4 1090 766 195 46 2 chr17 66200541 66200697 -29071954 - B3 SINE B2 -12 183 3 4 1090 439 132 40 0 chr17 66200730 66200806 -29071845 - B1_Mus2 SINE Alu -32 115 37 4 1090 1322 70 10 56 chr17 66201171 66201368 -29071283 + B2_Mm2 SINE B2 2 189 -6 4 1090 934 184 41 18 chr17 66201738 66201959 -29070692 + URR1A DNA MER1_type 1 226 0 4 1090 579 253 62 17 chr17 66202441 66202618 -29070033 + B3A SINE B2 3 187 -11 4 1090 369 275 24 108 chr17 66203683 66203705 -29068946 + B4 SINE B4 67 74 -218 4 1090 734 185 20 40 chr17 66203705 66203857 -29068794 + B1_Mur2 SINE Alu 1 149 0 4 1090 461 273 147 0 chr17 66203890 66204033 -29068618 + RSINE1 SINE B4 1 164 -1 4 1090 3793 97 11 4 chr17 66204441 66204970 -29067681 + RMER16 LTR ERVK 1 533 0 4 1090 243 103 0 0 chr17 66205051 66205090 -29067561 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1090 231 286 115 40 chr17 66205158 66205358 -29067293 - L1MD LINE L1 -448 5794 5580 4 1090 719 235 141 31 chr17 66205646 66205901 -29066750 - B4A SINE B4 -6 286 4 4 1090 626 258 61 12 chr17 66206026 66206191 -29066460 + ID_B1 SINE B4 52 224 0 4 1090 236 321 193 0 chr17 66207637 66207746 -29064905 - MIRb SINE MIR -38 230 101 4 1090 315 106 518 0 chr17 66207774 66207859 -29064792 + B2_Mm2 SINE B2 2 130 -65 4 1090 429 200 180 0 chr17 66208027 66208127 -29064524 + ID_B1 SINE B4 15 132 -92 4 1090 246 183 0 0 chr17 66208226 66208297 -29064354 + G-rich Low_complexity Low_complexity 11 81 0 4 1090 41 0 0 0 chr17 66209085 66209126 -29063525 + AT_rich Low_complexity Low_complexity 1 41 0 4 1090 873 74 21 43 chr17 66209188 66209329 -29063322 + B1_Mur4 SINE Alu 13 150 0 4 1090 206 0 69 0 chr17 66209336 66209365 -29063286 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1090 1408 80 43 0 chr17 66209414 66209601 -29063050 - B2_Mm2 SINE B2 0 195 1 4 1090 453 260 217 74 chr17 66209698 66209945 -29062706 + B4 SINE B4 6 288 -4 4 1090 1190 68 0 0 chr17 66210108 66210255 -29062396 + B1_Mus2 SINE Alu 1 147 0 4 1090 480 162 36 54 chr17 66211056 66211167 -29061484 + PB1D10 SINE Alu 1 109 -8 4 1090 1018 65 50 0 chr17 66211580 66211719 -29060932 + B1_Mus1 SINE Alu 3 148 0 4 1090 1274 98 11 16 chr17 66211748 66211935 -29060716 + B2_Mm1t SINE B2 2 187 -6 4 1090 939 141 103 29 chr17 66212063 66212238 -29060413 - B3 SINE B2 -28 188 1 4 1090 218 290 14 14 chr17 66212338 66212408 -29060243 + ID2 SINE ID 1 70 -13 4 1090 282 277 0 19 chr17 66213858 66213961 -29058690 + T-rich Low_complexity Low_complexity 2 102 0 4 1090 1686 153 24 42 chr17 66214625 66214964 -29057687 + RLTR12B LTR ERVK 1 315 -253 4 1090 283 96 0 37 chr17 66214969 66215023 -29057628 + (GGGAGA)n Simple_repeat Simple_repeat 6 57 0 4 1090 1148 165 58 55 chr17 66215026 66215283 -29057368 + RLTR12B LTR ERVK 241 498 -30 4 1090 286 284 57 29 chr17 66215391 66215496 -29057155 - PB1 SINE Alu -3 124 17 4 1090 498 217 139 16 chr17 66215572 66215694 -29056957 - B1_Mur2 SINE Alu -11 138 2 4 1090 405 0 0 0 chr17 66215716 66215761 -29056890 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1090 671 127 127 0 chr17 66216045 66216171 -29056480 + B1_Mus2 SINE Alu 5 146 -1 4 1090 425 261 117 8 chr17 66217390 66217510 -29055141 + B1F1 SINE Alu 15 147 -2 4 1090 325 200 34 233 chr17 66217541 66217717 -29054934 + B1_Mur3 SINE Alu 3 143 -6 4 1090 1228 48 7 0 chr17 66217731 66217878 -29054773 + B1_Mus1 SINE Alu 1 148 0 4 1090 21 0 0 0 chr17 66217886 66217907 -29054744 + AT_rich Low_complexity Low_complexity 1 21 0 4 1090 24 32 0 0 chr17 66218353 66218384 -29054267 + AT_rich Low_complexity Low_complexity 1 31 0 4 1090 788 138 0 0 chr17 66218389 66218505 -29054146 - B1_Mur1 SINE Alu -31 118 3 4 1090 480 254 33 17 chr17 66218398 66218518 -29054133 - B4 SINE B4 -94 198 77 4 1090 796 241 6 44 chr17 66218517 66218699 -29053952 - ID_B1 SINE B4 0 224 50 4 1090 231 243 56 28 chr17 66219035 66219107 -29053544 - MIR SINE MIR -123 139 66 4 1090 188 149 21 0 chr17 66219370 66219417 -29053234 + T-rich Low_complexity Low_complexity 2 49 0 4 1090 1352 94 11 0 chr17 66219421 66219612 -29053039 - B2_Mm1t SINE B2 0 193 1 4 1090 786 261 5 60 chr17 66219615 66219815 -29052836 - B3A SINE B2 0 198 10 4 1090 991 112 0 0 chr17 66220233 66220367 -29052284 + B1_Mus2 SINE Alu 1 134 -13 4 1090 468 0 0 0 chr17 66220507 66220559 -29052092 + (TC)n Simple_repeat Simple_repeat 2 53 0 4 1090 468 269 61 8 chr17 66220589 66220720 -29051931 - B3A SINE B2 -57 141 4 4 1090 264 180 0 0 chr17 66220819 66220869 -29051782 + B3 SINE B2 167 216 0 4 1090 251 274 125 10 chr17 66221019 66221115 -29051536 - B1F SINE Alu -2 147 41 4 1090 324 0 0 0 chr17 66223392 66223428 -29049223 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1090 630 196 29 115 chr17 66223442 66223650 -29049001 + B3A SINE B2 9 198 0 4 1090 398 309 107 28 chr17 66223952 66224168 -29048483 + MER119 DNA MER1_type 169 401 -182 4 1090 284 336 0 45 chr17 66224195 66224307 -29048344 - MER2B DNA MER2_type -34 302 196 4 1090 1381 79 17 0 chr17 66224372 66224549 -29048102 + B2_Mm2 SINE B2 2 181 -14 4 1090 448 267 148 0 chr17 66224578 66224713 -29047938 + RSINE1 SINE B4 2 156 -9 4 1090 550 206 55 34 chr17 66224721 66224867 -29047784 - RCHARR1 DNA MER1_type -117 857 709 4 1090 843 284 29 21 chr17 66225024 66225265 -29047386 - B4A SINE B4 -40 252 10 4 1090 521 278 57 54 chr17 66225331 66225493 -29047158 - RSINE1 SINE B4 -3 162 1 4 1090 672 233 74 0 chr17 66225493 66225668 -29046983 - RCHARR1 DNA MER1_type -486 488 301 4 1090 842 241 46 25 chr17 66225936 66226132 -29046519 + B3 SINE B2 15 214 -2 4 1090 643 178 0 36 chr17 66226319 66226430 -29046221 + PB1D9 SINE Alu 1 107 -13 4 1090 294 171 0 0 chr17 66226444 66226514 -29046137 + (CA)n Simple_repeat Simple_repeat 1 70 0 4 1090 363 237 31 10 chr17 66226521 66226619 -29046032 + Lx8 LINE L1 7153 7252 -221 4 1090 1384 99 5 0 chr17 66226869 66227060 -29045591 + B2_Mm1a SINE B2 1 192 -1 4 1090 309 293 16 57 chr17 66227133 66227256 -29045395 + RMER12 LTR ERVK 729 846 -476 4 1090 248 289 39 0 chr17 66227278 66227330 -29045321 - RSINE1 SINE B4 -109 56 3 4 1090 734 177 0 24 chr17 66227484 66227611 -29045040 - B1_Mur3 SINE Alu 0 149 26 5 1090 286 260 156 0 chr17 66227659 66227736 -29044915 - B1F1 SINE Alu -26 101 13 5 1090 833 260 86 50 chr17 66227764 66228004 -29044647 - B4 SINE B4 0 292 42 5 1090 1726 160 30 45 chr17 66228004 66228338 -29044313 + ORR1A4 LTR MaLR 1 329 0 5 1090 833 260 86 50 chr17 66228338 66228376 -29044275 - B4 SINE B4 -251 41 4 5 1090 792 225 87 40 chr17 66228394 66228623 -29044028 + ORR1D2 LTR MaLR 160 375 -4 5 1090 1436 65 16 5 chr17 66229045 66229231 -29043420 - B2_Mm2 SINE B2 -6 189 2 5 1090 838 265 39 47 chr17 66229294 66229551 -29043100 + B4A SINE B4 38 292 0 5 1090 295 256 58 0 chr17 66229689 66229775 -29042876 + PB1D10 SINE Alu 19 109 -8 5 1090 21 57 0 0 chr17 66229962 66229997 -29042654 + AT_rich Low_complexity Low_complexity 1 35 0 5 1090 317 156 0 45 chr17 66229998 66230065 -29042586 + B1_Mus2 SINE Alu 84 147 0 5 1090 363 263 127 8 chr17 66230081 66230215 -29042436 - B3A SINE B2 -66 150 1 5 1090 216 261 113 28 chr17 66230296 66230319 -29042332 - B1F1 SINE Alu -69 80 4 5 1090 220 208 21 0 chr17 66230319 66230367 -29042284 - B4A SINE B4 -155 137 89 5 1090 436 280 0 48 chr17 66230442 66230547 -29042104 + PB1D7 SINE Alu 1 100 -20 5 1090 204 274 91 40 chr17 66230815 66230914 -29041737 + L2 LINE L2 2411 2514 -905 5 1090 443 191 84 76 chr17 66232053 66232172 -29040479 + B1F2 SINE Alu 14 133 -16 5 1090 29 0 0 0 chr17 66232309 66232338 -29040313 + AT_rich Low_complexity Low_complexity 1 29 0 5 1090 455 230 106 43 chr17 66232355 66232496 -29040155 - B3A SINE B2 -48 150 1 5 1090 726 148 104 0 chr17 66232645 66232780 -29039871 - B1_Mur4 SINE Alu -1 149 1 5 1090 204 288 14 35 chr17 66233967 66234111 -29038540 + (CCG)n Simple_repeat Simple_repeat 3 143 0 5 1090 681 317 28 87 chr17 66235912 66235986 -29036665 + LTR40a LTR ERVL 174 245 -274 5 1090 279 0 0 0 chr17 66235986 66236017 -29036634 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1090 239 222 141 16 chr17 66236019 66236083 -29036568 - ID4_ SINE ID -8 75 4 5 1090 681 317 28 87 chr17 66236083 66236257 -29036394 + LTR40a LTR ERVL 246 410 -109 5 1090 442 286 67 50 chr17 66236213 66236227 -29036424 + CYRA11_Mm Unknown Y-chromosome 173 250 -367 5 1090 1183 161 25 0 chr17 66236227 66236426 -29036225 - URR1B DNA MER1_type -21 204 1 5 1090 385 336 22 7 chr17 66236426 66236558 -29036093 + LTR40b LTR ERVL 329 462 0 5 1090 442 286 67 50 chr17 66236426 66236452 -29036199 + CYRA11_Mm Unknown Y-chromosome 251 415 -202 5 1090 612 62 0 0 chr17 66236769 66236850 -29035801 + (TG)n Simple_repeat Simple_repeat 2 82 0 5 1090 2883 27 0 0 chr17 66236870 66237201 -29035450 + L1Md_F2 LINE L1 6240 6570 -12 5 1090 6534 122 75 53 chr17 66237230 66238372 -29034279 + MurERV4_19-int LTR ERVK 4582 5758 -22 5 1090 1089 81 175 0 chr17 66238372 66238532 -29034119 - B2_Mm2 SINE B2 -7 188 1 5 1090 6534 122 75 53 chr17 66238532 66238562 -29034089 + MurERV4_19-int LTR ERVK 5759 5780 0 5 1090 4210 127 109 9 chr17 66238562 66239232 -29033419 + RMER19A LTR ERVK 1 737 0 5 1090 22 70 0 0 chr17 66239364 66239407 -29033244 + AT_rich Low_complexity Low_complexity 1 43 0 5 1090 1584 43 16 0 chr17 66239931 66240119 -29032532 + B2_Mm2 SINE B2 1 191 -4 5 1090 679 229 0 46 chr17 66240293 66240444 -29032207 + B1_Mus2 SINE Alu 2 145 -2 5 1090 680 213 5 121 chr17 66240492 66240716 -29031935 + B3A SINE B2 1 198 0 5 1090 1830 164 75 109 chr17 66240760 66241238 -29031413 - RMER4A LTR ERVK 0 466 5 5 1090 10461 132 14 11 chr17 66241242 66242909 -29029742 - MurERV4-int LTR ERVK 0 5260 3590 5 1090 15771 157 42 50 chr17 66242899 66244151 -29028500 - MurERV4-int LTR ERVK -2307 2953 1732 5 1090 1531 43 11 0 chr17 66244151 66244338 -29028313 - B2_Mm1t SINE B2 -3 190 2 5 1090 15771 157 42 50 chr17 66244338 66244946 -29027705 - MurERV4-int LTR ERVK -3529 1731 1094 5 1090 4694 100 15 67 chr17 66244946 66245738 -29026913 - RMER17A LTR ERVK 0 751 1 5 1090 15771 157 42 50 chr17 66245738 66246853 -29025798 - MurERV4-int LTR ERVK -4167 1093 2 5 1090 2178 160 62 62 chr17 66246853 66246914 -29025737 - RMER4A LTR ERVK 0 466 418 5 1090 1401 63 40 0 chr17 66246914 66247088 -29025563 - B2_Mm2 SINE B2 -14 181 1 5 1090 2178 160 62 62 chr17 66247088 66247492 -29025159 - RMER4A LTR ERVK -49 417 1 5 1090 1373 71 43 0 chr17 66247531 66247715 -29024936 + B2_Mm1a SINE B2 2 193 0 5 1090 229 279 0 81 chr17 66247722 66247796 -29024855 + RSINE1 SINE B4 98 165 0 5 1090 569 232 38 10 chr17 66247837 66247982 -29024669 - B3 SINE B2 -5 211 63 5 1090 210 179 26 0 chr17 66248084 66248123 -29024528 + (TATATG)n Simple_repeat Simple_repeat 1 40 0 5 1090 1557 231 128 15 chr17 66248123 66248528 -29024123 + Lx8 LINE L1 6173 6623 -850 5 1090 1434 184 39 81 chr17 66248570 66248979 -29023672 + RMER6C LTR ERVK 111 502 -188 5 1090 469 161 21 31 chr17 66248939 66249035 -29023616 + B1_Mur2 SINE Alu 40 134 -15 5 1090 803 156 15 0 chr17 66249154 66249289 -29023362 - B1_Mur3 SINE Alu -12 137 1 5 1090 1351 74 23 0 chr17 66249330 66249505 -29023146 + B2_Mm2 SINE B2 3 181 -14 5 1090 341 102 505 10 chr17 66249533 66249632 -29023019 + B2_Mm2 SINE B2 47 194 -1 5 1090 650 241 161 83 chr17 66250254 66250471 -29022180 + B4A SINE B4 1 234 -58 5 1090 532 287 7 65 chr17 66250471 66250565 -29022086 + RSINE1 SINE B4 20 106 -59 5 1090 1162 29 22 0 chr17 66250565 66250703 -29021948 + B1_Mus2 SINE Alu 1 141 -6 5 1090 300 53 0 0 chr17 66250705 66250743 -29021908 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 5 1090 532 287 7 65 chr17 66250743 66250798 -29021853 + RSINE1 SINE B4 107 161 -4 5 1090 308 263 111 74 chr17 66251185 66251231 -29021420 + L1M4b LINE L1 1740 1786 -5548 5 1090 431 289 72 7 chr17 66251231 66251384 -29021267 + RSINE1 SINE B4 1 163 -2 5 1090 308 263 111 74 chr17 66251384 66251526 -29021125 + L1M4b LINE L1 1787 1935 -5399 5 1090 547 214 125 37 chr17 66251599 66251735 -29020916 + B1_Mur1 SINE Alu 2 149 0 5 1090 243 0 0 0 chr17 66251954 66251981 -29020670 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1090 375 155 0 14 chr17 66252116 66252188 -29020463 + Lx9 LINE L1 7566 7636 -8 5 1090 236 287 125 47 chr17 66252290 66252418 -29020233 - Charlie21a DNA MER1_type -527 686 549 5 1090 952 210 19 38 chr17 66252460 66252673 -29019978 - B3 SINE B2 -7 209 1 5 1090 369 318 75 6 chr17 66252675 66252849 -29019802 - Charlie21a DNA MER1_type -656 557 372 5 1090 561 276 7 46 chr17 66252852 66253004 -29019647 + ID_B1 SINE B4 73 218 -6 5 1090 767 188 0 8 chr17 66252877 66253011 -29019640 + B1_Mur4 SINE Alu 18 150 0 5 1090 242 106 21 0 chr17 66253036 66253083 -29019568 + (CAA)n Simple_repeat Simple_repeat 1 48 0 5 1090 219 292 0 0 chr17 66253476 66253524 -29019127 - PB1 SINE Alu -6 121 74 5 1090 344 260 0 0 chr17 66253709 66253786 -29018865 + ID_B1 SINE B4 142 218 -6 5 1090 457 252 161 40 chr17 66253801 66254099 -29018552 - L1M3 LINE L1 -497 5686 5353 5 1090 553 208 0 0 chr17 66254125 66254221 -29018430 + B1_Mur2 SINE Alu 11 106 -43 5 1090 279 0 0 0 chr17 66254244 66254275 -29018376 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1090 889 71 24 0 chr17 66254275 66254404 -29018247 - B1_Mm SINE Alu -91 220 26 5 1090 305 269 89 40 chr17 66254621 66254745 -29017906 - B1F SINE Alu -18 131 2 5 1090 234 91 0 0 chr17 66256069 66256102 -29016549 + (G)n Simple_repeat Simple_repeat 1 33 0 5 1090 240 339 38 8 chr17 66256188 66256319 -29016332 + ORR1E LTR MaLR 1 135 -224 5 1090 1140 217 5 0 chr17 66256947 66257154 -29015497 + B3 SINE B2 2 209 -7 5 1090 216 222 264 0 chr17 66257179 66257251 -29015400 + PB1D9 SINE Alu 1 91 -29 5 1090 243 222 192 14 chr17 66257352 66257425 -29015226 + MER57E2 LTR ERV1 1 86 -316 5 1090 243 263 105 0 chr17 66257503 66257579 -29015072 + MER57E2 LTR ERV1 108 191 -181 5 1090 792 286 130 8 chr17 66257619 66257857 -29014794 - MTE2b LTR MaLR -2 357 91 5 1090 245 75 0 24 chr17 66258049 66258090 -29014561 + (GA)n Simple_repeat Simple_repeat 2 41 0 5 1090 431 256 46 109 chr17 66258542 66258717 -29013934 - RLTR19-int LTR ERVK -1863 4274 4111 5 1090 271 191 79 0 chr17 66258777 66258840 -29013811 - RLTR19-int LTR ERVK -2028 4109 4042 5 1090 22 0 0 0 chr17 66258986 66259008 -29013643 + AT_rich Low_complexity Low_complexity 1 22 0 5 1090 657 186 23 31 chr17 66259013 66259141 -29013510 - B1_Mus2 SINE Alu 0 147 21 5 1090 781 132 6 163 chr17 66259204 66259312 -29013339 - B1_Mur4 SINE Alu 0 150 66 5 1090 8465 36 1 4 chr17 66259312 66260311 -29012340 + L1Md_F2 LINE L1 5587 6582 0 5 1090 781 132 6 163 chr17 66260311 66260374 -29012277 - B1_Mur4 SINE Alu -85 65 6 5 1090 385 308 67 15 chr17 66260470 66260605 -29012046 + B1F1 SINE Alu 6 147 -2 5 1090 1376 68 20 26 chr17 66261373 66261568 -29011083 - B2_Mm2 SINE B2 -1 194 1 5 1090 218 304 0 0 chr17 66261773 66261842 -29010809 + (TG)n Simple_repeat Simple_repeat 1 69 0 5 1090 333 0 0 0 chr17 66261844 66261881 -29010770 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 5 1090 1068 246 181 14 chr17 66261888 66262242 -29010409 - MTD LTR MaLR -2 417 5 5 1090 715 210 131 0 chr17 66262287 66262463 -29010188 + B4A SINE B4 1 199 -93 5 1090 288 0 0 0 chr17 66262543 66262575 -29010076 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1090 293 257 71 0 chr17 66262628 66262698 -29009953 - B4 SINE B4 -2 290 216 5 1090 465 231 120 0 chr17 66262740 66262857 -29009794 - RSINE1 SINE B4 -33 132 2 5 1090 381 284 89 36 chr17 66262871 66263039 -29009612 - B4 SINE B4 -100 192 16 5 1090 261 212 136 12 chr17 66264032 66264113 -29008538 + B4 SINE B4 202 292 0 5 1090 601 208 11 17 chr17 66264121 66264302 -29008349 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1090 440 226 6 19 chr17 66264319 66264477 -29008174 + (CA)n Simple_repeat Simple_repeat 1 156 0 5 1090 2206 137 11 78 chr17 66264506 66264717 -29007934 - MTC LTR MaLR -32 389 210 5 1090 1217 41 7 0 chr17 66264717 66264863 -29007788 - B1_Mus2 SINE Alu 0 147 1 5 1090 2206 133 10 79 chr17 66264863 66265077 -29007574 - MTC LTR MaLR -212 209 3 5 1090 953 144 0 11 chr17 66266097 66266272 -29006379 + CT-rich Low_complexity Low_complexity 3 175 0 5 1090 296 95 13 51 chr17 66266329 66266407 -29006244 + G-rich Low_complexity Low_complexity 2 76 0 5 1090 1050 223 249 56 chr17 66266418 66266831 -29005820 - RMER12 LTR ERVK -231 1091 599 5 1090 34 42 0 0 chr17 66266831 66266879 -29005772 + AT_rich Low_complexity Low_complexity 1 48 0 5 1090 1187 116 20 35 chr17 66266889 66266918 -29005733 - B2_Mm2 SINE B2 -1 194 167 5 1090 1138 68 7 0 chr17 66266918 66267065 -29005586 - B1_Mus1 SINE Alu 0 148 1 5 1090 1187 116 20 35 chr17 66267065 66267232 -29005419 - B2_Mm2 SINE B2 -29 166 1 5 1090 3680 113 21 47 chr17 66267232 66267799 -29004852 - RMER12 LTR ERVK -709 613 61 5 1090 3426 30 8 0 chr17 66267799 66268192 -29004459 + MTA_Mm LTR MaLR 1 396 0 5 1090 3680 113 21 47 chr17 66268192 66268247 -29004404 - RMER12 LTR ERVK -1262 60 7 5 1090 1102 59 0 0 chr17 66269027 66269162 -29003489 + B1_Mus1 SINE Alu 5 139 -9 6 1090 207 0 0 0 chr17 66269181 66269204 -29003447 + (A)n Simple_repeat Simple_repeat 1 23 0 6 1090 421 241 54 27 chr17 66269211 66269322 -29003329 + PB1 SINE Alu 11 124 -3 6 1090 250 175 0 0 chr17 66269679 66269719 -29002932 - MER57-int LTR ERV1 -343 7194 7155 6 1090 563 279 123 0 chr17 66270688 66270826 -29001825 + L1MA5 LINE L1 6049 6194 -106 6 1090 276 30 0 0 chr17 66270826 66270859 -29001792 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 1090 563 279 123 0 chr17 66270859 66270939 -29001712 + L1MA5 LINE L1 6195 6293 -7 6 1090 428 214 113 57 chr17 66270944 66271068 -29001583 - B1_Mur2 SINE Alu -15 134 4 6 1090 971 167 16 3 chr17 66271335 66271517 -29001134 + ORR1D1 LTR MaLR 1 190 -194 6 1090 765 254 89 73 chr17 66271517 66271886 -29000765 - RLTR14 LTR ERV1 0 382 8 6 1090 725 184 40 29 chr17 66271886 66272059 -29000592 + ORR1D1 LTR MaLR 204 378 0 6 1090 22 56 0 0 chr17 66273505 66273541 -28999110 + AT_rich Low_complexity Low_complexity 1 36 0 6 1090 448 111 60 36 chr17 66273586 66273670 -28998981 + B1F2 SINE Alu 64 149 0 6 1090 757 231 0 0 chr17 66274971 66275118 -28997533 - RSINE1 SINE B4 -16 149 3 6 1090 253 258 177 31 chr17 66276386 66276482 -28996169 - PB1D10 SINE Alu -7 110 1 6 1090 253 186 0 167 chr17 66276482 66276510 -28996141 - MT2B2 LTR ERVL -426 158 145 6 1090 361 302 29 79 chr17 66276596 66276642 -28996009 + ID SINE ID 49 87 -137 6 1090 255 276 79 79 chr17 66276642 66276768 -28995883 + B1_Mus1 SINE Alu 3 128 -20 6 1090 247 202 0 0 chr17 66277022 66277068 -28995583 - L2b LINE L2 -5 3421 3330 6 1090 274 250 45 91 chr17 66277549 66277659 -28994992 + B1F SINE Alu 45 149 0 6 1090 1210 68 0 0 chr17 66277748 66277896 -28994755 + B1_Mus1 SINE Alu 1 148 0 6 1090 321 186 155 10 chr17 66278207 66278310 -28994341 + RSINE1 SINE B4 12 129 -36 6 1090 321 26 0 0 chr17 66279426 66279464 -28993187 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1090 288 250 140 0 chr17 66279525 66279625 -28993026 + ID_B1 SINE B4 2 115 -109 6 1090 607 192 51 32 chr17 66279633 66279789 -28992862 - ORR1E LTR MaLR -154 205 47 6 1090 543 90 0 0 chr17 66279789 66279867 -28992784 + (CA)n Simple_repeat Simple_repeat 1 78 0 6 1090 390 338 29 22 chr17 66279896 66280032 -28992619 - ID_B1 SINE B4 -60 164 28 6 1090 390 129 0 0 chr17 66280182 66280244 -28992407 + (TCCC)n Simple_repeat Simple_repeat 3 64 0 6 1090 718 207 20 7 chr17 66281486 66281632 -28991019 - B1F SINE Alu -1 148 1 6 1090 702 207 7 7 chr17 66282229 66282375 -28990276 + B1_Mur1 SINE Alu 3 148 -1 6 1090 197 0 0 67 chr17 66282907 66282937 -28989714 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 6 1090 716 172 22 29 chr17 66282937 66283075 -28989576 - B1_Mur3 SINE Alu -12 137 1 6 1090 1030 176 27 54 chr17 66283177 66283399 -28989252 - B3 SINE B2 0 216 1 6 1090 2668 158 74 21 chr17 66283420 66284039 -28988612 + RMER19B LTR ERVK 207 902 0 6 1090 2216 97 0 0 chr17 66284294 66284613 -28988038 - ORR1A2 LTR MaLR -8 319 1 6 1090 1067 145 100 36 chr17 66284627 66284877 -28987774 + RLTR42-int LTR ERVK 1862 2127 -3395 6 1090 768 184 45 11 chr17 66284940 66285116 -28987535 + ORR1A4 LTR MaLR 1 182 -147 6 1090 796 268 66 57 chr17 66285123 66285591 -28987060 + RLTR19-int LTR ERVK 2480 2738 -3399 6 1090 348 305 63 81 chr17 66285625 66285957 -28986694 + RLTR19-int LTR ERVK 2858 3183 -2954 6 1090 320 143 68 41 chr17 66286001 66286074 -28986577 + RLTR19-int LTR ERVK 3499 3573 -2564 6 1090 439 203 97 45 chr17 66286090 66286245 -28986406 + RMER10A LTR ERVL 6 168 -274 6 1090 504 216 111 0 chr17 66286352 66286505 -28986146 + B3 SINE B2 47 216 0 6 1090 388 184 8 116 chr17 66286685 66286814 -28985837 - PB1D10 SINE Alu -1 116 2 6 1090 279 0 0 0 chr17 66287031 66287062 -28985589 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 1090 431 212 31 85 chr17 66287388 66287517 -28985134 + B3 SINE B2 18 139 -77 6 1090 751 90 8 8 chr17 66287517 66287640 -28985011 + (CA)n Simple_repeat Simple_repeat 2 124 0 6 1090 299 195 81 10 chr17 66287739 66287830 -28984821 + PB1 SINE Alu 30 124 -3 6 1090 232 303 26 13 chr17 66287846 66287923 -28984728 + ID2 SINE ID 2 79 -4 6 1090 324 0 0 0 chr17 66288560 66288596 -28984055 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 1090 380 300 13 20 chr17 66288600 66288753 -28983898 - B4A SINE B4 -5 287 136 6 1090 22 0 0 0 chr17 66290135 66290157 -28982494 + AT_rich Low_complexity Low_complexity 1 22 0 6 1090 415 326 14 14 chr17 66290395 66290541 -28982110 + ID_B1 SINE B4 78 223 -1 6 1090 794 204 48 48 chr17 66290738 66291026 -28981625 + ORR1C1 LTR MaLR 11 378 0 6 1090 750 230 59 89 chr17 66291034 66291392 -28981259 - MTEb LTR MaLR -32 347 1 6 1090 580 293 38 0 chr17 66291577 66291734 -28980917 - RSINE1 SINE B4 -1 164 2 6 1090 238 250 50 0 chr17 66292195 66292255 -28980396 - ID4 SINE ID 0 83 21 6 1090 1005 92 0 0 chr17 66292276 66292418 -28980233 + (CAT)n Simple_repeat Simple_repeat 2 143 0 6 1090 381 221 74 37 chr17 66292432 66292540 -28980111 - B3 SINE B2 -61 155 44 6 1090 195 42 0 0 chr17 66292624 66292648 -28980003 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 1090 214 214 0 0 chr17 66292648 66292690 -28979961 - B3 SINE B2 -131 85 44 6 1090 213 39 0 0 chr17 66292774 66292800 -28979851 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 1090 749 230 44 35 chr17 66292932 66293135 -28979516 + B3 SINE B2 2 206 -10 6 1090 280 244 105 7 chr17 66293156 66293306 -28979345 + L1M4 LINE L1 4444 4604 -1542 6 1090 530 255 88 0 chr17 66293314 66293518 -28979133 + L1MC2 LINE L1 5098 5319 -827 6 1090 658 175 58 0 chr17 66293518 66293655 -28978996 + B1_Mus2 SINE Alu 1 145 -2 6 1090 282 29 0 0 chr17 66293788 66293823 -28978828 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 1090 291 243 53 13 chr17 66293837 66293912 -28978739 - ID4 SINE ID -4 79 2 6 1090 648 190 0 8 chr17 66294082 66294204 -28978447 + MT2A LTR ERVL 1 121 -412 6 1090 1398 74 16 5 chr17 66294283 66294474 -28978177 - B2_Mm1a SINE B2 0 193 1 6 1090 546 208 175 6 chr17 66294486 66294646 -28978005 + MT2A LTR ERVL 85 271 -262 6 1090 529 208 0 160 chr17 66294669 66294875 -28977776 + MT2A LTR ERVL 361 533 0 6 1090 738 276 112 75 chr17 66294877 66295250 -28977401 + L1MC2 LINE L1 5833 6237 -107 6 1090 509 225 18 9 chr17 66295250 66295362 -28977289 + PB1D10 SINE Alu 5 117 0 6 1090 738 276 112 75 chr17 66295362 66295470 -28977181 + L1MC2 LINE L1 6238 6332 -12 6 1090 521 162 119 20 chr17 66295479 66295630 -28977021 + L1M4 LINE L1 4601 4766 -1380 6 1090 1124 167 181 39 chr17 66295706 66295922 -28976729 + ORR1C2 LTR MaLR 1 234 -150 6 1090 248 0 31 0 chr17 66295922 66295954 -28976697 + (CCTG)n Simple_repeat Simple_repeat 2 34 0 6 1090 1124 167 181 39 chr17 66295954 66296073 -28976578 + ORR1C2 LTR MaLR 235 383 -1 6 1090 977 47 0 0 chr17 66296102 66296230 -28976421 + B1_Mus1 SINE Alu 12 139 -9 6 1090 342 0 0 0 chr17 66296269 66296307 -28976344 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1090 1147 41 14 20 chr17 66296365 66296513 -28976138 - B1_Mus2 SINE Alu 0 147 1 6 1090 360 0 0 0 chr17 66296978 66297018 -28975633 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1090 207 0 0 0 chr17 66297036 66297059 -28975592 + (CATA)n Simple_repeat Simple_repeat 2 24 0 6 1090 546 268 53 18 chr17 66297499 66297670 -28974981 + MLT1F1 LTR MaLR 392 568 -1 6 1090 245 198 0 59 chr17 66298509 66298571 -28974080 + B1_Mur1 SINE Alu 2 58 -91 6 1090 706 255 0 48 chr17 66298629 66298835 -28973816 + B3A SINE B2 1 196 -2 6 1090 346 229 14 0 chr17 66298896 66298966 -28973685 - ID4 SINE ID -12 71 1 6 1090 252 268 28 14 chr17 66299214 66299286 -28973365 + RSINE1 SINE B4 2 74 -91 6 1090 814 94 0 30 chr17 66299256 66299387 -28973264 + B1_Mus1 SINE Alu 19 145 -3 6 1090 216 262 95 32 chr17 66299408 66299471 -28973180 + RSINE1 SINE B4 87 153 -12 6 1090 240 259 12 47 chr17 66299550 66299576 -28973075 + B4 SINE B4 64 86 -206 6 1090 350 241 13 0 chr17 66299576 66299655 -28972996 + PB1D10 SINE Alu 1 80 -37 6 1090 758 222 5 22 chr17 66299690 66299874 -28972777 + B3A SINE B2 1 181 -17 6 1090 498 262 57 0 chr17 66301604 66301726 -28970925 + RSINE1 SINE B4 37 165 0 6 1090 241 261 191 21 chr17 66301716 66301857 -28970794 - RLTR21 LTR ERVK -318 1254 1090 6 1090 427 251 206 0 chr17 66302286 66302468 -28970183 + ORR1E LTR MaLR 1 221 -138 6 1090 209 159 0 22 chr17 66303016 66303061 -28969590 + (TAA)n Simple_repeat Simple_repeat 3 46 0 6 1090 333 0 0 0 chr17 66304063 66304100 -28968551 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 1090 806 171 198 40 chr17 66304137 66304314 -28968337 - B3 SINE B2 -10 206 2 6 1090 273 226 86 97 chr17 66304364 66304457 -28968194 + MTEa LTR MaLR 1 92 -287 6 1090 1724 26 0 0 chr17 66304624 66304816 -28967835 - B2_Mm1t SINE B2 0 193 2 6 1090 566 180 53 18 chr17 66304818 66304931 -28967720 - PB1D9 SINE Alu -1 119 3 6 1090 226 128 26 0 chr17 66306077 66306116 -28966535 - BC1_Mm scRNA scRNA -76 76 37 6 1090 321 261 19 54 chr17 66306198 66306328 -28966323 - B4A SINE B4 -158 134 10 6 1090 492 146 0 0 chr17 66306648 66306737 -28965914 + (GGA)n Simple_repeat Simple_repeat 3 91 0 6 1090 351 286 75 3 chr17 66307695 66307842 -28964809 - MLT1H1 LTR MaLR -4 565 414 6 1090 383 277 92 0 chr17 66308084 66308203 -28964448 + RSINE1 SINE B4 19 148 -17 6 1090 21 36 0 0 chr17 66308219 66308247 -28964404 + AT_rich Low_complexity Low_complexity 1 28 0 6 1090 2611 291 90 31 chr17 66308289 66309326 -28963325 + Lx8 LINE L1 6189 7286 -187 6 1090 771 210 191 11 chr17 66309635 66309818 -28962833 + B3 SINE B2 1 216 0 6 1090 588 290 20 20 chr17 66309835 66309871 -28962780 + B3 SINE B2 5 40 -176 6 1090 1279 108 28 0 chr17 66309871 66310047 -28962604 + B2_Mm2 SINE B2 1 181 -14 7 1090 588 290 20 20 chr17 66310047 66310214 -28962437 + B3 SINE B2 41 207 -9 6 1090 584 169 127 0 chr17 66310217 66310335 -28962316 + B1_Mus2 SINE Alu 2 134 -13 7 1090 234 0 0 0 chr17 66310338 66310364 -28962287 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 7 1090 706 226 85 11 chr17 66310654 66310842 -28961809 + RLTR30 LTR ERV1 1 202 -177 7 1090 434 179 13 0 chr17 66311500 66311578 -28961073 + RLTR30 LTR ERV1 236 314 -65 7 1090 978 104 18 12 chr17 66311693 66311858 -28960793 + B2_Mm1t SINE B2 14 179 -14 7 1090 353 167 163 36 chr17 66311905 66312020 -28960631 + B2_Mm2 SINE B2 47 190 -3 7 1090 414 0 0 0 chr17 66313598 66313644 -28959007 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 1090 222 241 0 0 chr17 66313645 66313699 -28958952 - RSINE1 SINE B4 -93 72 19 7 1090 384 306 0 18 chr17 66313832 66313942 -28958709 - RSINE1 SINE B4 -57 108 1 7 1090 284 265 12 12 chr17 66313942 66314024 -28958627 + Charlie1a DNA MER1_type 737 818 -637 7 1090 218 115 0 88 chr17 66314091 66314148 -28958503 + A-rich Low_complexity Low_complexity 3 54 0 7 1090 931 157 7 7 chr17 66314543 66314691 -28957960 + B1_Mur3 SINE Alu 2 149 0 7 1090 312 221 101 6 chr17 66314700 66314805 -28957846 + L1ME2 LINE L1 5350 5471 -693 7 1090 449 298 144 23 chr17 66315053 66315392 -28957259 + L1ME2 LINE L1 5695 6077 -96 7 1090 192 40 0 0 chr17 66315730 66315755 -28956896 + (A)n Simple_repeat Simple_repeat 1 25 0 7 1090 721 190 13 52 chr17 66316086 66316241 -28956410 + B1_Mur1 SINE Alu 1 149 0 7 1090 452 242 11 0 chr17 66316346 66316437 -28956214 - B1F SINE Alu -57 92 1 7 1090 185 0 0 39 chr17 66317620 66317646 -28955005 + (CAAAAA)n Simple_repeat Simple_repeat 6 30 0 7 1090 180 0 0 0 chr17 66318543 66318563 -28954088 + (TTG)n Simple_repeat Simple_repeat 2 21 0 7 1090 24 0 0 0 chr17 66319321 66319345 -28953306 + AT_rich Low_complexity Low_complexity 1 24 0 7 1090 281 283 42 32 chr17 66319956 66320051 -28952600 - PB1D7 SINE Alu -12 108 13 7 1090 506 331 22 34 chr17 66320179 66320357 -28952294 - B3A SINE B2 -22 176 1 7 1090 763 120 8 0 chr17 66320488 66320605 -28952046 - B1_Mus2 SINE Alu 0 147 30 7 1090 525 160 53 62 chr17 66320665 66320778 -28951873 - B3 SINE B2 -17 199 88 7 1090 3561 48 22 85 chr17 66320794 66321300 -28951351 + MT2C_Mm LTR ERVL 1 474 -1 7 1090 692 273 48 10 chr17 66321368 66321575 -28951076 + ID_B1 SINE B4 8 222 -2 7 1090 449 282 25 25 chr17 66322044 66322204 -28950447 + RSINE1 SINE B4 4 163 -2 7 136 3273 48 2 2 chr17 66322249 66322642 -28950009 + MTA_Mm LTR MaLR 1 393 -3 7 1091 258 105 0 0 chr17 66322642 66322680 -28949971 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 1091 252 0 0 0 chr17 66322680 66322707 -28949944 + (TC)n Simple_repeat Simple_repeat 2 29 0 7 1091 295 303 81 8 chr17 66323556 66323679 -28948972 + RSINE1 SINE B4 34 165 0 7 1091 289 290 82 27 chr17 66323721 66323831 -28948820 - PB1D7 SINE Alu -4 116 1 7 1091 360 269 3 5 chr17 66324880 66324959 -28947692 - B4A SINE B4 -146 78 2 7 1091 883 41 187 0 chr17 66325194 66325317 -28947334 - B1_Mm SINE Alu -1 146 1 7 1091 820 214 78 48 chr17 66325744 66325950 -28946701 + B3 SINE B2 5 216 0 7 1091 459 319 59 40 chr17 66325951 66326173 -28946478 - L1MB7 LINE L1 -111 6073 5848 7 1091 408 305 147 5 chr17 66326623 66326821 -28945830 + MER34 LTR ERV1 1 226 -316 7 1091 426 283 86 24 chr17 66327024 66327234 -28945417 - L1MB7 LINE L1 -435 5743 5521 7 1091 513 308 10 58 chr17 66327328 66327535 -28945116 - B3A SINE B2 -19 197 1 7 1091 455 243 86 22 chr17 66328050 66328189 -28944462 - B1_Mur2 SINE Alu -1 148 1 7 1091 1027 237 123 10 chr17 66329102 66329438 -28943213 - MTD LTR MaLR -17 402 46 7 1091 189 0 0 0 chr17 66329530 66329551 -28943100 + (A)n Simple_repeat Simple_repeat 1 21 0 7 1091 3577 34 0 2 chr17 66330117 66330533 -28942118 + L1Md_F3 LINE L1 6156 6570 -14 7 1091 689 54 0 0 chr17 66331554 66331646 -28941005 + B1_Mus2 SINE Alu 47 138 -9 7 1091 304 128 90 0 chr17 66331933 66332011 -28940640 + MER33 DNA MER1_type 123 207 -117 7 1091 238 299 15 0 chr17 66332070 66332137 -28940514 - ID4_ SINE ID -11 72 5 7 1091 220 281 33 22 chr17 66335767 66335858 -28936793 + T-rich Low_complexity Low_complexity 2 93 0 7 1091 226 333 18 0 chr17 66336304 66336415 -28936236 + T-rich Low_complexity Low_complexity 1 113 0 7 1091 288 274 55 134 chr17 66337294 66337496 -28935155 - RLTR41 LTR ERV1 -62 384 199 7 1091 624 206 71 35 chr17 66338064 66338205 -28934446 + B1_Mur2 SINE Alu 3 148 -1 7 1091 289 321 43 35 chr17 66338293 66338409 -28934242 + PB1D10 SINE Alu 1 117 0 7 1091 823 172 0 15 chr17 66338487 66338617 -28934034 + B1_Mur1 SINE Alu 22 149 0 7 1091 316 288 38 0 chr17 66338695 66338775 -28933876 - B4A SINE B4 -176 116 34 7 1091 207 0 0 0 chr17 66338801 66338824 -28933827 + (CCCCCA)n Simple_repeat Simple_repeat 6 28 0 7 1091 802 180 0 0 chr17 66338891 66339019 -28933632 + B1_Mus1 SINE Alu 7 134 -14 7 1091 180 0 0 0 chr17 66339019 66339039 -28933612 + (CAAA)n Simple_repeat Simple_repeat 4 23 0 7 1091 295 248 100 58 chr17 66339190 66339310 -28933341 + Lx7 LINE L1 6500 6624 -1072 7 1091 1659 250 130 18 chr17 66339349 66339985 -28932666 + Lx7 LINE L1 6791 7688 -8 7 1091 3345 114 61 2 chr17 66339976 66340502 -28932149 - L1_Mur1 LINE L1 -1210 4667 4111 7 1091 6141 137 17 1 chr17 66340502 66341456 -28931195 + L1_Mur1 LINE L1 4683 5651 -235 7 1091 3826 177 18 25 chr17 66341453 66342343 -28930308 + Lx3C LINE L1 6084 6999 -1 7 1091 28682 91 30 2 chr17 66342418 66347260 -28925391 - L1_Mus2 LINE L1 -1 6565 1578 7 1091 556 200 99 8 chr17 66347590 66347721 -28924930 - B1_Mur3 SINE Alu 0 149 7 7 1091 333 207 71 119 chr17 66347727 66347742 -28924909 + MT2B LTR ERVL 145 153 -448 7 1091 856 157 29 0 chr17 66347742 66347882 -28924769 + B1_Mus1 SINE Alu 1 144 -4 7 1091 651 278 26 0 chr17 66348420 66348571 -28924080 + RSINE1 SINE B4 11 165 0 7 1091 207 162 0 0 chr17 66349094 66349131 -28923520 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1091 1082 189 28 33 chr17 66349471 66349684 -28922967 + B3 SINE B2 3 214 -2 7 1091 772 78 276 0 chr17 66349721 66349837 -28922814 - B1_Mus1 SINE Alu 0 148 1 7 1091 441 285 106 0 chr17 66349975 66350098 -28922553 + RSINE1 SINE B4 2 137 -28 7 1091 813 202 98 26 chr17 66350188 66350385 -28922266 + B3 SINE B2 20 210 -6 7 1091 901 125 0 42 chr17 66350625 66350767 -28921884 - B2_Mm1t SINE B2 -9 184 49 7 1091 1038 223 36 5 chr17 66351052 66351246 -28921405 + B3 SINE B2 3 202 -14 7 1091 456 275 187 0 chr17 66351269 66351451 -28921200 - B3 SINE B2 0 216 1 7 1091 205 152 0 0 chr17 66351452 66351485 -28921166 + C-rich Low_complexity Low_complexity 1 33 0 7 1091 586 278 34 97 chr17 66351485 66351709 -28920942 - B4A SINE B4 -59 233 1 7 1091 564 278 26 41 chr17 66352068 66352263 -28920388 + B3A SINE B2 1 192 -6 7 1091 347 253 24 24 chr17 66352728 66352813 -28919838 - PB1D10 SINE Alu -7 110 26 7 1091 691 258 64 5 chr17 66352859 66353046 -28919605 - B3A SINE B2 0 198 1 7 1091 427 293 8 33 chr17 66353264 66353384 -28919267 + PB1D10 SINE Alu 1 117 0 7 1091 341 103 35 0 chr17 66353397 66353455 -28919196 + (GGGGA)n Simple_repeat Simple_repeat 2 61 0 7 1091 250 241 155 12 chr17 66353478 66353562 -28919089 + PB1D10 SINE Alu 17 112 -5 7 1091 876 168 0 86 chr17 66354205 66354368 -28918283 + B1_Mur3 SINE Alu 1 149 0 7 1091 270 321 36 0 chr17 66354529 66354613 -28918038 - PB1D7 SINE Alu -25 95 9 7 1091 550 318 39 0 chr17 66354541 66354695 -28917956 - ID_B1 SINE B4 -63 161 2 7 1091 612 40 0 0 chr17 66355573 66355648 -28917003 + (GGAA)n Simple_repeat Simple_repeat 3 77 0 7 1091 256 245 0 0 chr17 66356446 66356499 -28916152 - B1_Mur1 SINE Alu -5 144 92 7 1091 2118 182 121 16 chr17 66357299 66358119 -28914532 + RMER13B LTR ERVK 1 906 -2 7 1091 1065 173 5 5 chr17 66358129 66358321 -28914330 - B3 SINE B2 -24 192 1 7 1091 1232 55 7 7 chr17 66358480 66358628 -28914023 - B1_Mus1 SINE Alu 0 148 1 7 1091 354 124 349 37 chr17 66359047 66359156 -28913495 - B2_Mm2 SINE B2 -6 189 47 7 1091 1343 86 17 6 chr17 66359207 66359383 -28913268 - B2_Mm1t SINE B2 -14 179 2 7 1091 497 176 192 8 chr17 66359764 66359884 -28912767 + B1_Mur1 SINE Alu 6 147 0 7 1091 282 253 114 102 chr17 66360080 66360247 -28912404 - Charlie10a DNA MER1_type -74 206 38 7 1091 216 0 0 0 chr17 66360868 66360892 -28911759 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 7 1091 1235 35 7 7 chr17 66360892 66361036 -28911615 - B1_Mm SINE Alu -3 144 1 7 1091 965 186 23 83 chr17 66361963 66362180 -28910471 + B3 SINE B2 1 204 -12 7 1091 302 304 0 37 chr17 66362313 66362395 -28910256 + ID2 SINE ID 2 80 -3 7 1091 618 240 7 44 chr17 66362659 66362794 -28909857 + RSINE1 SINE B4 3 132 -33 7 1091 579 214 16 33 chr17 66363112 66363233 -28909418 - PB1D9 SINE Alu -1 119 1 7 1091 267 333 12 24 chr17 66363542 66363625 -28909026 - ID SINE ID -141 83 2 7 1091 3512 110 37 66 chr17 66364451 66365073 -28907578 + RLTR6_Mm LTR ERV1 1 604 -50 7 1091 6562 25 46 17 chr17 66365074 66365880 -28906771 + RLTR6-int LTR ERV1 1 829 -6949 7 1091 406 294 0 59 chr17 66365874 66366026 -28906625 + MMVL30-int LTR ERV1 391 533 -7023 7 1091 15669 30 36 7 chr17 66366374 66369219 -28903432 + MMVL30-int LTR ERV1 772 3698 0 7 1091 3369 111 38 68 chr17 66369219 66369821 -28902830 + RLTR6_Mm LTR ERV1 1 584 -70 7 1091 906 163 28 33 chr17 66369961 66370151 -28902500 - B3 SINE B2 -8 187 1 7 1091 299 240 45 70 chr17 66370293 66370450 -28902201 - L1MC5 LINE L1 -901 7060 6908 8 1091 3435 67 0 26 chr17 66370458 66370920 -28901731 + L1_Mus3 LINE L1 6024 6473 -165 8 1091 3545 99 130 0 chr17 66370920 66371475 -28901176 + RLTR33 LTR ERVK 52 678 0 8 1091 689 285 38 0 chr17 66371475 66371661 -28900990 - B3 SINE B2 -23 193 1 8 1091 1136 69 0 70 chr17 66371999 66372155 -28900496 + B1_Mus1 SINE Alu 3 147 -1 8 1091 214 143 0 67 chr17 66372155 66372215 -28900436 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 8 1091 301 233 0 16 chr17 66372315 66372376 -28900275 - B1_Mur4 SINE Alu -90 60 1 8 1091 256 267 22 55 chr17 66372486 66372577 -28900074 - L1M6 LINE L1 -4991 1505 1418 8 1091 486 150 50 0 chr17 66372640 66372720 -28899931 + BC1_Mm scRNA scRNA 1 84 -68 8 1091 552 202 51 34 chr17 66372758 66372876 -28899775 + PB1D9 SINE Alu 1 120 0 8 1091 541 266 0 0 chr17 66373287 66373396 -28899255 + PB1D10 SINE Alu 1 109 -8 8 1091 706 275 23 28 chr17 66373620 66373837 -28898814 - B3 SINE B2 0 216 1 8 1091 370 153 35 29 chr17 66374026 66374141 -28898510 + B1_Mur2 SINE Alu 32 148 -1 8 1091 1540 75 0 5 chr17 66374245 66374433 -28898218 + B2_Mm2 SINE B2 2 188 -7 8 1091 434 245 41 13 chr17 66374913 66375084 -28897567 + B3A SINE B2 3 182 -34 8 1091 222 37 0 0 chr17 66375114 66375141 -28897510 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 1091 687 195 0 86 chr17 66375278 66375441 -28897210 + B1_Mur4 SINE Alu 2 150 0 8 1091 833 216 0 0 chr17 66375798 66375946 -28896705 + B3 SINE B2 2 149 -67 8 1091 414 0 0 0 chr17 66375950 66375996 -28896655 + (CA)n Simple_repeat Simple_repeat 1 46 0 8 1091 369 355 34 31 chr17 66376209 66376279 -28896372 - B4 SINE B4 -23 269 104 8 1091 616 244 0 9 chr17 66376279 66376395 -28896256 - B1_Mur1 SINE Alu -34 115 1 8 1091 1515 66 39 0 chr17 66376889 66377070 -28895581 + B2_Mm2 SINE B2 1 188 -7 8 1091 194 0 0 37 chr17 66377262 66377289 -28895362 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 8 1091 1254 49 0 0 chr17 66377291 66377433 -28895218 - B1_Mus2 SINE Alu -5 142 1 8 1091 191 36 0 35 chr17 66378068 66378097 -28894554 + (TCCC)n Simple_repeat Simple_repeat 1 28 0 8 1091 244 239 0 0 chr17 66378116 66378162 -28894489 - B4A SINE B4 -140 152 107 8 1091 395 324 36 27 chr17 66378214 66378338 -28894313 - B1F2 SINE Alu -2 125 1 8 1091 371 382 0 24 chr17 66378231 66378357 -28894294 - ID_B1 SINE B4 -38 186 64 8 1091 697 211 49 14 chr17 66378510 66378654 -28893997 + B1_Mur2 SINE Alu 1 149 0 8 1091 341 305 38 38 chr17 66378798 66378955 -28893696 + RSINE1 SINE B4 4 160 -5 8 1091 5885 60 8 4 chr17 66378974 66379738 -28892913 - L1_Mur1 LINE L1 -1768 4118 3352 8 1091 4727 73 13 8 chr17 66379738 66380348 -28892303 + Lx3_Mus LINE L1 6397 7009 0 8 1091 21 71 0 0 chr17 66380609 66380651 -28892000 + AT_rich Low_complexity Low_complexity 1 42 0 8 1091 3233 232 67 27 chr17 66380949 66381734 -28890917 + Lx9 LINE L1 6697 7489 -155 8 1091 474 18 0 0 chr17 66381734 66381789 -28890862 + (TG)n Simple_repeat Simple_repeat 2 56 0 8 1091 3233 232 67 27 chr17 66381789 66381900 -28890751 + Lx9 LINE L1 7490 7628 -16 8 1091 344 194 46 57 chr17 66382039 66382145 -28890506 + B1_Mus2 SINE Alu 2 147 0 8 1091 1437 75 38 0 chr17 66382148 66382334 -28890317 + B2_Mm1t SINE B2 1 193 0 8 1091 471 248 210 0 chr17 66382739 66382896 -28889755 - B3A SINE B2 -7 191 2 8 1091 5918 90 1 44 chr17 66383542 66384402 -28888249 - L1_Mm LINE L1 -310 5573 4751 8 1091 8126 58 4 0 chr17 66384398 66385457 -28887194 + L1_Mus1 LINE L1 5507 6567 0 8 1091 180 0 0 0 chr17 66385536 66385556 -28887095 + (CAA)n Simple_repeat Simple_repeat 1 20 0 8 1091 389 275 48 27 chr17 66385567 66385713 -28886938 + B1F SINE Alu 1 149 0 8 1091 491 286 43 55 chr17 66385967 66386130 -28886521 + RSINE1 SINE B4 3 163 -2 8 1091 222 208 0 0 chr17 66386390 66386443 -28886208 + (CA)n Simple_repeat Simple_repeat 1 53 0 8 1091 24 100 0 0 chr17 66386447 66386527 -28886124 + AT_rich Low_complexity Low_complexity 1 80 0 8 1091 813 309 13 4 chr17 66387251 66387488 -28885163 - MER2 DNA MER2_type 0 345 107 8 1091 315 0 0 0 chr17 66388640 66388675 -28883976 + (T)n Simple_repeat Simple_repeat 1 35 0 8 1091 1275 27 0 0 chr17 66388675 66388822 -28883829 - B1_Mm SINE Alu 0 147 1 8 1091 379 155 28 0 chr17 66389040 66389111 -28883540 + PB1D9 SINE Alu 31 103 -17 8 1091 3181 51 5 8 chr17 66389171 66389568 -28883083 + MTA_Mm LTR MaLR 1 396 0 8 1091 735 204 35 0 chr17 66390908 66391050 -28881601 + B1_Mur1 SINE Alu 2 148 -1 8 1091 1311 84 39 0 chr17 66391056 66391235 -28881416 + B2_Mm2 SINE B2 2 187 -8 8 1091 890 75 68 0 chr17 66392570 66392703 -28879948 - MTA_Mm LTR MaLR -9 387 246 8 1091 225 21 0 113 chr17 66392732 66392785 -28879866 + (TGGG)n Simple_repeat Simple_repeat 3 49 0 8 1091 1164 62 0 0 chr17 66392921 66393065 -28879586 + B1_Mm SINE Alu 2 145 -2 8 1091 243 0 0 0 chr17 66393065 66393092 -28879559 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 8 1091 1200 92 63 0 chr17 66393139 66393313 -28879338 - B2_Mm2 SINE B2 -8 187 3 8 1091 501 155 99 9 chr17 66393504 66393615 -28879036 - B1_Mur2 SINE Alu -7 142 22 8 1091 554 239 13 60 chr17 66393688 66393756 -28878895 + B3 SINE B2 73 133 -83 8 1091 3074 69 26 0 chr17 66393756 66394146 -28878505 + MTB LTR MaLR 1 400 0 8 1091 554 239 13 60 chr17 66394146 66394228 -28878423 + B3 SINE B2 134 216 0 8 1091 304 261 14 0 chr17 66394275 66394344 -28878307 + ID4_ SINE ID 14 83 0 8 1091 231 394 8 8 chr17 66394376 66394509 -28878142 + ID_B1 SINE B4 86 218 -6 8 1091 750 51 244 8 chr17 66394531 66394650 -28878001 + B1_Mus1 SINE Alu 2 148 0 8 1091 1579 32 0 26 chr17 66394742 66394932 -28877719 + B2_Mm1t SINE B2 1 185 -8 8 1091 1773 134 152 11 chr17 66395000 66395369 -28877282 + MTC LTR MaLR 1 421 0 8 1091 216 0 0 0 chr17 66395385 66395409 -28877242 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 8 1091 383 188 10 58 chr17 66395415 66395518 -28877133 - B1_Mur2 SINE Alu -25 125 22 8 1091 441 0 0 0 chr17 66395850 66395899 -28876752 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 1091 231 61 0 0 chr17 66396014 66396047 -28876604 + (CTG)n Simple_repeat Simple_repeat 2 34 0 8 1091 959 62 14 0 chr17 66396051 66396195 -28876456 - B1_Mus1 SINE Alu 0 148 3 8 1091 223 306 76 89 chr17 66396463 66396481 -28876170 + B4A SINE B4 78 184 -108 8 1091 561 160 112 67 chr17 66396481 66396615 -28876036 + B1_Mur3 SINE Alu 10 149 0 8 1091 210 327 0 0 chr17 66396621 66396676 -28875975 + polypurine Low_complexity Low_complexity 1 55 0 8 1091 659 234 14 20 chr17 66397034 66397182 -28875469 + B1_Mur1 SINE Alu 2 148 -1 8 1091 236 269 139 37 chr17 66397418 66397526 -28875125 + MLT1L LTR MaLR 415 533 -77 8 1091 269 306 0 0 chr17 66398084 66398156 -28874495 + B4A SINE B4 217 288 -4 8 1091 228 35 0 0 chr17 66398169 66398198 -28874453 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 1091 1293 163 279 10 chr17 66398227 66398524 -28874127 + ORR1C1 LTR MaLR 1 377 -1 8 1091 488 246 17 17 chr17 66398537 66398657 -28873994 - RSINE1 SINE B4 -24 141 22 8 1091 479 317 30 24 chr17 66399351 66399516 -28873135 + B3 SINE B2 2 167 -49 8 1091 1670 203 86 77 chr17 66399700 66399809 -28872842 + MTC LTR MaLR 1 108 -313 8 1091 1156 97 96 6 chr17 66399809 66399986 -28872665 - B2_Mm2 SINE B2 0 195 3 8 1091 1670 203 86 77 chr17 66399986 66400293 -28872358 + MTC LTR MaLR 109 421 0 8 1091 513 277 0 0 chr17 66400326 66400445 -28872206 - PB1D7 SINE Alu 0 120 2 8 1091 207 255 21 0 chr17 66400594 66400661 -28871990 + G-rich Low_complexity Low_complexity 1 68 0 8 1091 533 187 69 76 chr17 66400793 66400938 -28871713 + B1_Mur3 SINE Alu 1 144 -5 8 1091 370 302 93 0 chr17 66401018 66401147 -28871504 + RSINE1 SINE B4 15 155 -10 8 1091 233 306 0 9 chr17 66401217 66401326 -28871325 + L1_Mm LINE L1 3530 3637 -2246 8 1091 265 146 0 0 chr17 66401426 66401467 -28871184 + B2_Mm2 SINE B2 1 41 -154 8 1091 1404 45 74 0 chr17 66401468 66401644 -28871007 + B2_Mm2 SINE B2 3 191 -4 8 1091 792 183 28 0 chr17 66401652 66401794 -28870857 + B1_Mus2 SINE Alu 2 147 0 8 1091 455 273 56 76 chr17 66401810 66402008 -28870643 + B3A SINE B2 1 194 -4 8 1091 353 316 0 21 chr17 66402143 66402240 -28870411 + B3A SINE B2 86 180 -18 8 1091 448 289 24 59 chr17 66403604 66403773 -28868878 + RSINE1 SINE B4 3 165 0 8 1091 336 255 125 19 chr17 66404416 66404576 -28868075 + L1MEf LINE L1 1853 2029 -4171 8 1091 471 293 42 14 chr17 66404605 66404747 -28867904 + RSINE1 SINE B4 20 165 0 8 1091 557 314 33 25 chr17 66404813 66404843 -28867808 + L1_Rod LINE L1 2151 2178 -3669 8 1091 1989 162 98 16 chr17 66404843 66405219 -28867432 + MTB_Mm LTR MaLR 1 407 0 8 1091 557 314 33 25 chr17 66405219 66405433 -28867218 + L1_Rod LINE L1 2179 2397 -3450 8 1091 1063 78 35 0 chr17 66405433 66405574 -28867077 + B1_Mus1 SINE Alu 2 147 -1 8 1091 269 278 167 0 chr17 66405642 66405750 -28866901 + RMER5 LTR ERV1 15 140 -394 8 1091 636 143 0 9 chr17 66405738 66405844 -28866807 + RMER5 LTR ERV1 430 534 0 8 1091 551 236 19 121 chr17 66405847 66406112 -28866539 + L1_Mur3 LINE L1 2404 2641 -3239 8 1091 870 239 19 10 chr17 66406201 66406408 -28866243 - B3 SINE B2 -3 213 5 9 1091 428 239 171 54 chr17 66406425 66406955 -28865696 + L1_Mur3 LINE L1 3741 3936 -1944 8 1091 462 206 83 62 chr17 66406955 66407100 -28865551 + B1_Mur1 SINE Alu 2 149 0 9 1091 320 263 178 69 chr17 66407100 66407249 -28865402 + L1_Mur3 LINE L1 5059 5220 -920 8 1091 471 268 91 43 chr17 66407409 66407596 -28865055 + B3A SINE B2 3 198 0 9 1091 2794 210 51 24 chr17 66407646 66408311 -28864340 + Lx9 LINE L1 6521 7203 -441 9 1091 195 129 0 0 chr17 66408326 66408357 -28864294 + (T)n Simple_repeat Simple_repeat 1 31 0 9 1091 4117 48 51 11 chr17 66408364 66408896 -28863755 - Lx3_Mus LINE L1 0 7009 6457 9 1091 7526 77 43 5 chr17 66408896 66409416 -28863235 + L1_Mus3 LINE L1 5442 5984 -654 9 1091 1091 83 0 14 chr17 66409416 66409427 -28863224 - B1_Mus2 SINE Alu -1 146 137 9 1091 249 57 0 0 chr17 66409427 66409462 -28863189 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 9 1091 1091 83 0 14 chr17 66409462 66409597 -28863054 - B1_Mus2 SINE Alu -11 136 2 9 1091 7526 137 75 37 chr17 66409597 66410644 -28862007 + L1_Mus3 LINE L1 5985 7046 -4 9 1091 420 181 57 57 chr17 66411190 66411313 -28861338 + B1_Mur1 SINE Alu 27 149 0 9 1091 951 156 201 0 chr17 66411663 66411842 -28860809 - B3 SINE B2 0 216 2 9 1091 279 0 0 0 chr17 66411875 66411906 -28860745 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 9 1091 637 241 42 14 chr17 66411906 66412039 -28860612 - B1_Mur1 SINE Alu -11 138 1 9 1091 416 309 102 6 chr17 66412053 66412219 -28860432 - B3 SINE B2 -10 206 25 9 1091 693 159 53 27 chr17 66412407 66412589 -28860062 + B3 SINE B2 2 185 -10 9 1091 850 84 3 26 chr17 66412625 66412757 -28859894 + B1_Mus1 SINE Alu 16 148 0 9 1091 229 303 48 72 chr17 66412781 66412948 -28859703 + RSINE1 SINE B4 3 165 0 9 1091 458 238 175 0 chr17 66413176 66413302 -28859349 + ID_B1 SINE B4 14 161 -63 9 1091 421 254 30 22 chr17 66413339 66413460 -28859191 + B1F2 SINE Alu 5 125 -23 9 1091 1112 89 0 14 chr17 66413566 66413714 -28858937 - B1_Mus1 SINE Alu -2 146 1 9 1091 1357 102 21 0 chr17 66413833 66414020 -28858631 + B2_Mm1t SINE B2 2 192 -1 9 1091 305 273 84 2 chr17 66414083 66414200 -28858451 + L1MA4 LINE L1 5807 5935 -377 9 1091 336 266 29 114 chr17 66414395 66414535 -28858116 + B4A SINE B4 1 128 -164 9 1091 339 231 39 0 chr17 66414548 66414626 -28858025 - RLTR30 LTR ERV1 -298 81 1 9 1091 276 102 0 0 chr17 66417363 66417412 -28855239 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 9 1091 1963 168 5 48 chr17 66417600 66417993 -28854658 - RLTR30 LTR ERV1 0 379 4 9 1091 392 256 0 0 chr17 66418159 66418237 -28854414 + ID4 SINE ID 2 79 -4 9 1091 233 139 23 0 chr17 66418253 66418296 -28854355 + Lx8 LINE L1 7423 7466 -7 9 1091 24 32 0 0 chr17 66418300 66418331 -28854320 + AT_rich Low_complexity Low_complexity 1 31 0 9 1091 3146 65 12 12 chr17 66418397 66418802 -28853849 + MTB_Mm LTR MaLR 3 407 0 9 1091 697 194 43 0 chr17 66418856 66418995 -28853656 + B1_Mus1 SINE Alu 3 147 -1 9 1091 308 339 98 0 chr17 66419035 66419147 -28853504 + B1F SINE Alu 1 123 -26 9 1091 248 273 139 20 chr17 66419599 66419700 -28852951 + RSINE1 SINE B4 29 141 -24 9 1091 27 0 0 0 chr17 66419702 66419729 -28852922 + AT_rich Low_complexity Low_complexity 1 27 0 9 1091 1610 37 0 5 chr17 66419738 66419929 -28852722 + B2_Mm1a SINE B2 1 190 -3 9 1091 342 226 42 0 chr17 66420498 66420584 -28852067 - B1F2 SINE Alu -14 135 38 9 1091 225 154 0 0 chr17 66420608 66420647 -28852004 + CT-rich Low_complexity Low_complexity 4 42 0 9 1091 315 0 0 0 chr17 66420887 66420922 -28851729 + (TG)n Simple_repeat Simple_repeat 1 35 0 9 1091 628 184 0 9 chr17 66420957 66421072 -28851579 - B3A SINE B2 -81 117 4 9 1091 24 32 0 0 chr17 66421124 66421155 -28851496 + AT_rich Low_complexity Low_complexity 1 31 0 9 1091 347 273 10 0 chr17 66421161 66421260 -28851391 - RSINE1 SINE B4 -31 134 35 9 1091 190 0 67 0 chr17 66421419 66421449 -28851202 + (CAAAAA)n Simple_repeat Simple_repeat 6 37 0 9 1091 216 0 0 0 chr17 66421861 66421885 -28850766 + (TG)n Simple_repeat Simple_repeat 2 25 0 9 1091 597 190 17 33 chr17 66421885 66422005 -28850646 - B1_Mur4 SINE Alu -32 118 1 9 1091 619 229 0 0 chr17 66422143 66422261 -28850390 + B1_Mur1 SINE Alu 32 149 0 9 1091 197 132 0 26 chr17 66422269 66422308 -28850343 + A-rich Low_complexity Low_complexity 5 42 0 9 1091 419 218 126 24 chr17 66422342 66422469 -28850182 - B1F SINE Alu -1 148 9 9 1091 212 364 52 37 chr17 66423100 66423234 -28849417 - MIRc SINE MIR -125 143 8 9 1091 239 304 26 18 chr17 66423619 66423733 -28848918 + PB1D10 SINE Alu 3 117 0 9 1091 514 178 76 23 chr17 66423747 66423879 -28848772 + B3A SINE B2 59 197 -1 9 1091 778 199 192 6 chr17 66423887 66424069 -28848582 + B3 SINE B2 1 216 0 9 1091 355 267 76 25 chr17 66424815 66424934 -28847717 + RSINE1 SINE B4 10 134 -31 9 1091 22 0 0 0 chr17 66424943 66424965 -28847686 + AT_rich Low_complexity Low_complexity 1 22 0 9 1091 21 36 0 0 chr17 66425814 66425842 -28846809 + GC_rich Low_complexity Low_complexity 1 28 0 9 1091 21 0 0 0 chr17 66426015 66426036 -28846615 + GC_rich Low_complexity Low_complexity 1 21 0 9 1091 206 269 0 0 chr17 66426277 66426329 -28846322 + (CCG)n Simple_repeat Simple_repeat 1 52 0 9 1091 604 210 183 22 chr17 66427543 66427723 -28844928 + B3 SINE B2 2 210 -6 9 1091 408 220 30 10 chr17 66427748 66427849 -28844802 - B1_Mur1 SINE Alu -13 136 34 9 1091 276 150 0 6 chr17 66428158 66428218 -28844433 + B1F SINE Alu 59 148 -1 9 1091 249 200 198 12 chr17 66428279 66428365 -28844286 + B1F2 SINE Alu 27 128 -21 9 1091 568 190 48 40 chr17 66428995 66429121 -28843530 + B1_Mur1 SINE Alu 20 146 -3 9 1091 383 345 61 0 chr17 66429782 66429930 -28842721 - B4A SINE B4 -3 289 133 9 1091 1285 189 165 33 chr17 66430485 66430818 -28841833 + ORR1C2 LTR MaLR 8 384 0 9 1091 180 0 0 0 chr17 66431071 66431091 -28841560 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 9 1091 4222 4 0 0 chr17 66431485 66431944 -28840707 + L1Md_A LINE L1 6124 6582 0 9 1091 1140 82 0 0 chr17 66431971 66432118 -28840533 + B1_Mm SINE Alu 1 147 0 9 1091 992 99 35 0 chr17 66432992 66433133 -28839518 + B1_Mus1 SINE Alu 3 148 0 9 1091 331 305 37 19 chr17 66433141 66433248 -28839403 + PB1D10 SINE Alu 3 111 -6 9 1091 389 265 8 33 chr17 66433304 66433425 -28839226 - PB1D7 SINE Alu -2 118 1 9 1091 1214 48 0 13 chr17 66433688 66433837 -28838814 + B1_Mm SINE Alu 1 147 0 9 1091 204 40 0 0 chr17 66433879 66433904 -28838747 + (GGGTG)n Simple_repeat Simple_repeat 5 29 0 9 1091 547 215 58 22 chr17 66433910 66434048 -28838603 + B3 SINE B2 17 159 -57 9 1091 1030 82 7 7 chr17 66434080 66434216 -28838435 + Lx2 LINE L1 6499 6634 -363 9 1091 1329 81 76 0 chr17 66434216 66434426 -28838225 + Lx2 LINE L1 6765 6990 -7 9 1091 684 193 50 0 chr17 66435126 66435266 -28837385 + B1_Mus2 SINE Alu 1 147 0 9 1091 898 47 0 0 chr17 66435433 66435540 -28837111 + U6 snRNA snRNA 1 107 0 9 1091 3884 54 32 2 chr17 66435540 66436040 -28836611 + L1_Mus2 LINE L1 6052 6566 0 9 1091 375 260 125 60 chr17 66436142 66436326 -28836325 - B3A SINE B2 -1 197 2 9 1091 402 225 8 59 chr17 66436586 66436704 -28835947 - PB1D9 SINE Alu -8 112 1 9 1091 1136 71 0 0 chr17 66437238 66437379 -28835272 + B1_Mus1 SINE Alu 2 142 -6 9 1091 189 0 0 0 chr17 66437380 66437401 -28835250 + (GA)n Simple_repeat Simple_repeat 2 22 0 9 1091 372 250 0 0 chr17 66437469 66437557 -28835094 - BC1_Mm scRNA scRNA -59 93 6 9 1091 1068 88 0 20 chr17 66438344 66438494 -28834157 + B1_Mus2 SINE Alu 1 147 0 9 1091 208 143 0 0 chr17 66438839 66438874 -28833777 + (A)n Simple_repeat Simple_repeat 1 35 0 9 1091 232 171 0 0 chr17 66439211 66439252 -28833399 + B3A SINE B2 2 42 -156 9 1091 678 237 0 36 chr17 66439252 66439392 -28833259 + B1_Mus2 SINE Alu 2 136 -11 9 1091 559 231 29 64 chr17 66439418 66439589 -28833062 + B3A SINE B2 34 198 0 9 1091 270 279 12 12 chr17 66439763 66439843 -28832808 + PB1D7 SINE Alu 38 117 -3 9 1091 467 136 123 0 chr17 66439952 66440033 -28832618 + B1_Mur1 SINE Alu 23 113 -36 9 1091 624 171 86 39 chr17 66440516 66440644 -28832007 - B1_Mur3 SINE Alu -15 134 1 9 1091 634 264 54 10 chr17 66440828 66441031 -28831620 + B3 SINE B2 1 212 -4 9 1091 270 229 0 76 chr17 66441053 66441119 -28831532 - ID4_ SINE ID -10 73 13 9 1091 378 200 171 24 chr17 66441612 66441735 -28830916 - B1_Mur3 SINE Alu -7 142 2 9 1091 278 258 50 40 chr17 66441810 66441911 -28830740 - PB1D10 SINE Alu -6 111 10 9 1091 537 150 214 45 chr17 66443133 66443245 -28829406 - B1_Mm SINE Alu -13 134 4 9 1091 1185 55 0 7 chr17 66443307 66443454 -28829197 - B1_Mus1 SINE Alu -2 146 1 9 1091 1099 88 0 0 chr17 66443641 66443778 -28828873 + B1_Mus2 SINE Alu 3 139 -8 9 1091 185 0 40 0 chr17 66443778 66443803 -28828848 + (CAA)n Simple_repeat Simple_repeat 2 27 0 9 1091 1127 209 29 0 chr17 66443992 66444202 -28828449 + B3 SINE B2 1 216 0 9 1091 256 338 14 0 chr17 66444665 66444739 -28827912 - RSINE1 SINE B4 -89 76 2 9 1091 686 83 0 20 chr17 66444875 66444973 -28827678 + B2_Mm2 SINE B2 1 96 -99 9 1091 548 284 40 90 chr17 66445086 66445287 -28827364 - B3A SINE B2 -2 196 6 9 1091 637 263 47 42 chr17 66445312 66445526 -28827125 - B3 SINE B2 -1 215 1 1 1091 872 141 0 0 chr17 66445575 66445710 -28826941 - B1_Mur3 SINE Alu 0 149 15 1 1091 323 299 39 59 chr17 66445580 66445733 -28826918 - B4A SINE B4 -70 222 73 1 1091 1234 55 0 0 chr17 66445749 66445895 -28826756 - B1_Mus2 SINE Alu 0 147 2 1 1091 327 131 83 0 chr17 66446485 66446553 -28826098 - B1_Mus1 SINE Alu -74 76 1 1 1091 447 319 8 8 chr17 66446556 66446673 -28825978 - PB1D10 SINE Alu 0 117 1 1 1091 223 245 0 19 chr17 66447292 66447346 -28825305 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1091 840 72 216 78 chr17 66447369 66447505 -28825146 + B2_Mm2 SINE B2 6 176 -19 1 1091 1289 98 22 5 chr17 66447505 66447690 -28824961 - B2_Mm2 SINE B2 -7 188 1 1 1091 840 72 216 78 chr17 66447690 66447720 -28824931 + B2_Mm2 SINE B2 177 195 0 1 1091 582 182 143 0 chr17 66447945 66448071 -28824580 - B1_Mur2 SINE Alu -2 147 4 1 1091 451 252 35 9 chr17 66448217 66448333 -28824318 + PB1D7 SINE Alu 1 119 -1 1 1091 307 241 261 19 chr17 66448359 66448520 -28824131 + L1MEb LINE L1 259 458 -5612 1 1091 331 231 89 122 chr17 66448738 66448861 -28823790 + B1_Mur1 SINE Alu 28 146 -3 1 1091 293 318 39 31 chr17 66449173 66449303 -28823348 + YREP_Mm Unknown Unknown 166 296 -1516 1 1091 317 344 61 0 chr17 66449189 66449320 -28823331 - B1F SINE Alu -7 142 4 1 1091 548 260 20 14 chr17 66449485 66449633 -28823018 + B1F2 SINE Alu 1 149 0 1 1091 252 0 0 0 chr17 66449839 66449867 -28822784 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 1091 22 56 0 0 chr17 66450547 66450583 -28822068 + GC_rich Low_complexity Low_complexity 1 36 0 1 1091 27 62 0 0 chr17 66450868 66450916 -28821735 + GC_rich Low_complexity Low_complexity 1 48 0 1 1091 1255 41 0 0 chr17 66451826 66451973 -28820678 + B1_Mus2 SINE Alu 1 147 0 1 1091 24 0 0 0 chr17 66451973 66451997 -28820654 + AT_rich Low_complexity Low_complexity 1 24 0 1 1091 244 175 0 0 chr17 66452224 66452264 -28820387 - ID_B1 SINE B4 -16 208 169 1 1091 4174 74 14 21 chr17 66452274 66452851 -28819800 - LTRIS_Mus LTR ERV1 -14 573 1 1 1091 762 29 37 37 chr17 66452906 66453015 -28819636 - B2_Mm1a SINE B2 0 193 85 1 1091 1614 47 0 0 chr17 66453015 66453206 -28819445 - B2_Mm1t SINE B2 -2 191 1 1 1091 526 93 0 23 chr17 66453259 66453347 -28819304 + (TCC)n Simple_repeat Simple_repeat 3 88 0 1 1091 1141 89 0 0 chr17 66453348 66453494 -28819157 - B1_Mus2 SINE Alu 0 147 2 1 1092 210 288 0 33 chr17 66453510 66453571 -28819080 + L2a LINE L2 3363 3421 -5 1 1092 2420 73 35 0 chr17 66453642 66453958 -28818693 + ORR1A2 LTR MaLR 1 327 0 1 1092 3667 155 35 15 chr17 66453958 66454766 -28817885 + ORR1A2-int LTR MaLR 1 823 -686 1 1092 1888 134 388 2 chr17 66454766 66455184 -28817467 + MT2B2 LTR ERVL 1 579 -5 1 1092 1714 100 68 25 chr17 66455186 66455464 -28817187 + ORR1A2-int LTR MaLR 892 1181 -782 1 1092 847 207 113 5 chr17 66455571 66455765 -28816886 + B3 SINE B2 1 215 -1 1 1092 267 31 0 0 chr17 66455780 66455812 -28816839 + (GGAA)n Simple_repeat Simple_repeat 3 34 0 1 1092 772 199 25 25 chr17 66455831 66455991 -28816660 + B2_Mm2 SINE B2 2 161 -34 1 1092 629 74 239 9 chr17 66455994 66456103 -28816548 - RMER15 LTR ERVL -73 502 369 1 1092 880 196 130 0 chr17 66456096 66456280 -28816371 + RMER15 LTR ERVL 172 379 -196 1 1092 304 286 0 87 chr17 66456605 66456697 -28815954 - RSINE1 SINE B4 0 165 82 1 1092 453 81 0 0 chr17 66456698 66456760 -28815891 + (TCTCCC)n Simple_repeat Simple_repeat 5 66 0 1 1092 388 170 53 3 chr17 66456762 66456855 -28815796 - B1_Mur3 SINE Alu -7 142 41 1 1092 675 168 7 69 chr17 66456883 66457040 -28815611 - B1_Mus1 SINE Alu -2 146 5 1 1092 185 186 93 0 chr17 66457226 66457269 -28815382 - L2b LINE L2 -212 3163 3117 1 1092 1048 189 269 11 chr17 66457596 66457879 -28814772 - ORR1C1 LTR MaLR -22 356 1 1 1092 1761 93 13 288 chr17 66458091 66458327 -28814324 - ORR1A2 LTR MaLR 0 327 101 1 1092 297 51 0 0 chr17 66458327 66458366 -28814285 + (GTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1092 1761 93 13 288 chr17 66458366 66458580 -28814071 - ORR1A2 LTR MaLR -227 100 1 1 1092 751 211 13 13 chr17 66459280 66459429 -28813222 + B1_Mur2 SINE Alu 1 149 0 1 1092 317 24 24 0 chr17 66459980 66460022 -28812629 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1092 552 313 20 7 chr17 66460024 66460175 -28812476 - B3A SINE B2 -45 153 1 1 1092 315 0 0 0 chr17 66460449 66460484 -28812167 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1092 374 252 87 62 chr17 66461643 66461804 -28810847 - RMER15 LTR ERVL -11 564 400 1 1092 1504 73 16 0 chr17 66462640 66462832 -28809819 - B2_Mm2 SINE B2 0 195 1 1 1092 21 0 0 0 chr17 66462906 66462927 -28809724 + AT_rich Low_complexity Low_complexity 1 21 0 1 1092 258 374 11 0 chr17 66462955 66463046 -28809605 - RSINE1 SINE B4 0 165 74 1 1092 264 303 67 11 chr17 66463050 66463140 -28809511 - ID_B1 SINE B4 -21 203 109 1 1092 281 274 38 23 chr17 66464262 66464393 -28808258 + CT-rich Low_complexity Low_complexity 4 136 0 1 1092 183 129 0 0 chr17 66465758 66465789 -28806862 + (GGGA)n Simple_repeat Simple_repeat 1 31 0 1 1092 223 174 0 21 chr17 66466632 66466679 -28805972 + C-rich Low_complexity Low_complexity 6 51 0 1 1092 307 341 40 0 chr17 66467890 66468016 -28804635 + MIRm SINE MIR 50 180 -96 1 1092 330 87 0 0 chr17 66468271 66468317 -28804334 + (TCTG)n Simple_repeat Simple_repeat 2 47 0 1 1092 3137 68 2 8 chr17 66469499 66469896 -28802755 + MTA_Mm LTR MaLR 1 395 -1 1 1092 236 268 42 0 chr17 66471212 66471283 -28801368 - tRNA-Glu-GAA tRNA tRNA -1 74 1 1 1092 1431 55 66 0 chr17 66471317 66471498 -28801153 - B2_Mm2 SINE B2 -1 194 2 1 1092 510 264 32 84 chr17 66471537 66471727 -28800924 + ID_B1 SINE B4 32 211 -13 1 1092 878 107 0 0 chr17 66471607 66471729 -28800922 + B1_Mus2 SINE Alu 15 136 -11 1 1092 198 0 0 0 chr17 66471732 66471754 -28800897 + (GA)n Simple_repeat Simple_repeat 2 23 0 1 1092 933 155 32 27 chr17 66472511 66472697 -28799954 + B2_Mm2 SINE B2 1 187 -8 1 1092 794 200 20 0 chr17 66473918 66474068 -28798583 - B3 SINE B2 -27 166 2 1 1092 788 178 0 22 chr17 66475252 66475436 -28797215 + C-rich Low_complexity Low_complexity 1 180 0 1 1092 182 178 44 0 chr17 66475433 66475478 -28797173 + CT-rich Low_complexity Low_complexity 4 50 0 1 1092 634 191 261 11 chr17 66476459 66476639 -28796012 + URR1B DNA MER1_type 1 225 0 1 1092 221 235 0 29 chr17 66477104 66477174 -28795477 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 1 1092 324 0 0 0 chr17 66477176 66477212 -28795439 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1092 2380 68 16 0 chr17 66477798 66478107 -28794544 + ORR1A2 LTR MaLR 6 319 -8 1 1092 423 306 34 107 chr17 66478217 66478405 -28794246 - MLT1B LTR MaLR -20 370 197 1 1092 1260 48 0 0 chr17 66478405 66478552 -28794099 - B1_Mm SINE Alu 0 147 1 1 1092 423 306 34 107 chr17 66478552 66478568 -28794083 - MLT1B LTR MaLR -194 196 181 1 1092 26 0 0 0 chr17 66479524 66479550 -28793101 + AT_rich Low_complexity Low_complexity 1 26 0 1 1092 664 226 13 167 chr17 66481280 66481514 -28791137 - RMER20A LTR ERVK 0 516 319 1 1092 2312 171 83 78 chr17 66481516 66482031 -28790620 - RLTR25A LTR ERVK -585 518 1 1 1092 513 157 0 35 chr17 66482147 66482233 -28790418 + B2_Mm2 SINE B2 1 83 -112 1 1092 1704 31 0 0 chr17 66483715 66483908 -28788743 - B2_Mm1a SINE B2 0 193 1 1 1092 1194 157 121 0 chr17 66484002 66484282 -28788369 + Lx9 LINE L1 7329 7642 -2 1 1092 705 152 14 17 chr17 66484472 66484613 -28788038 + PB1D9 SINE Alu 7 146 -4 1 1092 1175 196 0 38 chr17 66484664 66484876 -28787775 + B3 SINE B2 2 205 -11 1 1092 425 291 118 13 chr17 66486755 66486908 -28785743 - B4 SINE B4 -116 176 8 1 1092 1473 69 37 0 chr17 66490377 66490565 -28782086 + B2_Mm2 SINE B2 1 195 0 1 1092 296 96 52 2 chr17 66490565 66490662 -28781989 + B2_Mm2 SINE B2 57 195 0 1 1092 669 138 141 37 chr17 66490676 66490811 -28781840 + B1_Mur4 SINE Alu 2 150 0 1 1092 483 175 0 0 chr17 66491372 66491452 -28781199 - B1_Mus2 SINE Alu 0 147 68 1 1092 778 209 99 28 chr17 66491928 66492110 -28780541 - B3 SINE B2 -19 197 3 1 1092 597 182 86 16 chr17 66492263 66492391 -28780260 - RMER13B LTR ERVK -767 141 5 1 1092 1202 111 66 0 chr17 66493945 66494126 -28778525 + B2_Mm2 SINE B2 2 194 -1 1 1092 549 197 145 30 chr17 66494829 66494960 -28777691 - B1_Mur2 SINE Alu -3 146 1 1 1092 454 271 19 0 chr17 66494991 66495098 -28777553 - B3A SINE B2 -88 110 2 1 1092 906 120 8 8 chr17 66495323 66495457 -28777194 - B1_Mus1 SINE Alu -12 136 3 1 1092 249 360 60 69 chr17 66495643 66495861 -28776790 + RMER10B LTR ERVL 1 216 -182 1 1092 362 243 58 11 chr17 66496007 66496165 -28776486 - L1MC LINE L1 -683 5620 5457 1 1092 499 292 76 33 chr17 66496297 66496567 -28776084 - Lx8 LINE L1 -211 7262 6955 1 1092 270 305 64 27 chr17 66496550 66496769 -28775882 - L1M5 LINE L1 -756 5484 5258 1 1092 378 0 0 0 chr17 66498965 66499007 -28773644 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1092 545 289 40 25 chr17 66499012 66499205 -28773446 + B4A SINE B4 102 292 0 1 1092 1104 81 0 0 chr17 66501069 66501205 -28771446 + B1_Mus1 SINE Alu 3 138 -10 1 1092 207 0 0 0 chr17 66501205 66501228 -28771423 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1092 372 77 0 0 chr17 66502818 66502870 -28769781 + (TGAA)n Simple_repeat Simple_repeat 2 53 0 3 1092 743 81 0 14 chr17 66503855 66503966 -28768685 + B1_Mm SINE Alu 20 146 -1 4 1092 458 146 74 46 chr17 66503953 66504061 -28768590 - RLTR22_Mur LTR ERVK -1484 364 254 5 1092 864 144 6 11 chr17 66504176 66504351 -28768300 + CT-rich Low_complexity Low_complexity 2 175 0 6 1092 415 319 24 36 chr17 66504357 66504523 -28768128 - B3A SINE B2 -30 168 5 7 1092 230 183 33 0 chr17 66506030 66506090 -28766561 + (CATA)n Simple_repeat Simple_repeat 1 62 0 8 1092 295 350 22 14 chr17 66506947 66507086 -28765565 - MTE2b LTR MaLR -101 278 139 9 1092 1354 175 104 36 chr17 66507328 66507636 -28765015 + ORR1A4 LTR MaLR 1 329 0 1 1092 765 270 163 54 chr17 66507806 66507884 -28764767 + MTD LTR MaLR 2 72 -347 1 1092 1424 82 0 35 chr17 66507884 66508085 -28764566 + B2_Mm2 SINE B2 2 195 0 1 1092 765 270 163 54 chr17 66508085 66508134 -28764517 + MTD LTR MaLR 73 124 -295 1 1092 1249 34 0 7 chr17 66508134 66508282 -28764369 - B1_Mus1 SINE Alu 0 148 2 1 1092 765 270 163 54 chr17 66508282 66508521 -28764130 + MTD LTR MaLR 125 409 -10 1 1092 1221 188 158 60 chr17 66508562 66508605 -28764046 + RMER6A LTR ERVK 1 43 -713 1 1092 1376 79 11 11 chr17 66508605 66508796 -28763855 - B2_Mm2 SINE B2 -4 191 1 1 1092 1221 209 159 47 chr17 66508796 66509259 -28763392 + RMER6A LTR ERVK 44 756 0 1 1092 3250 44 15 5 chr17 66509279 66509671 -28762980 - MTA_Mm LTR MaLR 0 396 1 1 1092 3507 34 0 124 chr17 66510358 66510856 -28761795 + RLTR10C LTR ERVK 1 436 0 1 1092 358 222 43 61 chr17 66510880 66510995 -28761656 + RLTR15 LTR ERVK 1 113 -246 1 1092 339 178 11 32 chr17 66510997 66511090 -28761561 + G-rich Low_complexity Low_complexity 3 93 0 1 1092 526 281 49 37 chr17 66511090 66511334 -28761317 + RLTR15 LTR ERVK 99 345 -14 1 1092 188 88 0 56 chr17 66511459 66511495 -28761156 + (TAA)n Simple_repeat Simple_repeat 1 34 0 2 1092 1964 156 0 7 chr17 66511522 66511832 -28760819 + RLTR10E LTR ERVK 1 308 -3 2 1092 3227 186 60 69 chr17 66511836 66512716 -28759935 + MMERVK10C-int LTR ERVK 1 872 -6709 2 1092 1472 176 142 42 chr17 66512691 66513136 -28759515 + RMER16-int LTR ERVK 313 688 -5449 2 1092 553 195 88 0 chr17 66513123 66513236 -28759415 + RMER16-int LTR ERVK 938 1060 -5077 2 1092 1316 230 69 20 chr17 66513249 66513555 -28759096 + MMERVK10C-int LTR ERVK 2454 2774 -4632 2 1092 2166 133 45 4 chr17 66513563 66514191 -28758460 + MMERVK10C-int LTR ERVK 3567 4271 -3135 2 1092 453 185 9 36 chr17 66514195 66514307 -28758344 + MMETn-int LTR ERVK 2356 2464 -2380 2 1092 20391 75 0 3 chr17 66514323 66515668 -28756983 + MMERVK10C-int LTR ERVK 4530 5871 -1710 2 1092 3514 23 2 2 chr17 66515668 66516064 -28756587 + MTA_Mm LTR MaLR 1 396 0 2 1092 20391 75 0 3 chr17 66516064 66517285 -28755366 + MMERVK10C-int LTR ERVK 5872 7088 -493 2 1092 2119 78 83 46 chr17 66517285 66517633 -28755018 - RLTR10B2 LTR ERVK 0 365 5 2 1092 3619 142 11 14 chr17 66517653 66518224 -28754427 + MMERVK10C-int LTR ERVK 7112 7680 0 2 1092 1994 143 0 10 chr17 66518224 66518535 -28754116 + RLTR10E LTR ERVK 1 308 -3 2 1092 6928 91 12 76 chr17 66518588 66518989 -28753662 + L1_Mus3 LINE L1 5593 5970 -668 2 1092 1224 108 32 0 chr17 66518989 66519175 -28753476 + B2_Mm1a SINE B2 2 193 0 2 1092 6928 91 12 76 chr17 66519175 66519890 -28752761 + L1_Mus3 LINE L1 5971 6638 0 2 1092 202 138 0 33 chr17 66519911 66519971 -28752680 + (TTA)n Simple_repeat Simple_repeat 1 58 0 2 1092 2279 125 158 19 chr17 66520007 66520430 -28752221 + RLTR45 LTR ERVK 1 482 0 3 1092 3634 115 40 2 chr17 66520430 66520954 -28751697 + RLTR45-int LTR ERVK 1 544 -6700 3 1092 1118 49 0 40 chr17 66521496 66521646 -28751005 + RLTR45-int LTR ERVK 549 692 -6552 3 1092 1824 78 0 0 chr17 66521979 66522209 -28750442 + RLTR45-int LTR ERVK 681 910 -6334 3 1092 828 124 8 0 chr17 66522319 66522448 -28750203 + RLTR45-int LTR ERVK 902 1031 -6213 3 1092 258 221 73 0 chr17 66522426 66522494 -28750157 + RLTR45-int LTR ERVK 1736 1808 -4734 3 1092 276 259 26 26 chr17 66522776 66522914 -28749737 + RLTR45-int LTR ERVK 2385 2509 -4744 3 1092 2737 47 0 0 chr17 66523237 66523557 -28749094 + RLTR45-int LTR ERVK 1329 1648 -5596 3 1092 7695 148 17 12 chr17 66523646 66525044 -28747607 + RLTR45-int LTR ERVK 6325 7749 -468 3 1092 2736 129 37 37 chr17 66525044 66525526 -28747125 + RLTR45 LTR ERVK 1 482 0 3 1092 2960 68 8 2 chr17 66525526 66525923 -28746728 - BGLII LTR ERVK -19 402 4 3 1092 455 167 65 0 chr17 66525924 66526032 -28746619 - MYSERV16_I-int LTR ERVK -1 2841 2727 3 1092 234 0 0 0 chr17 66526038 66526064 -28746587 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 3 1092 924 9 0 0 chr17 66526064 66526172 -28746479 - B1_Mus1 SINE Alu -7 141 34 3 1092 2854 200 116 11 chr17 66526172 66526992 -28745659 - MYSERV16_I-int LTR ERVK -123 2203 1298 3 1092 656 191 36 48 chr17 66526987 66527152 -28745499 - RMER3D-int LTR ERVK -1148 1694 1532 3 1092 1981 171 112 18 chr17 66527181 66527674 -28744977 - RMER3D-int LTR ERVK -1309 1533 1014 3 1092 584 139 46 0 chr17 66527684 66527696 -28744955 - RMER3D-int LTR ERVK -2245 597 586 3 1092 524 0 45 0 chr17 66527696 66527762 -28744889 + (TTTCC)n Simple_repeat Simple_repeat 2 70 0 3 1092 584 139 46 0 chr17 66527762 66527857 -28744794 - RMER3D-int LTR ERVK -2257 585 486 3 1092 434 100 43 0 chr17 66528208 66528278 -28744373 - BGLII LTR ERVK 0 421 349 3 1092 2968 133 7 13 chr17 66528288 66528751 -28743900 + RLTR1D LTR ERV1 37 496 -109 3 1092 1798 73 4 12 chr17 66528748 66528999 -28743652 - BGLII LTR ERVK -172 249 1 3 1092 1128 94 88 0 chr17 66529449 66529619 -28743032 + B2_Mm1t SINE B2 2 186 -7 4 1092 1941 290 53 60 chr17 66529949 66530958 -28741693 + MYSERV-int LTR ERVK 3775 4768 -1782 4 1092 3984 95 25 9 chr17 66530958 66531513 -28741138 - LTRIS2 LTR ERV1 0 564 1 4 1092 759 298 42 72 chr17 66531513 66531562 -28741089 + MYSERV-int LTR ERVK 483 534 -1792 4 1092 335 259 69 41 chr17 66531634 66531779 -28740872 + MYSERV-int LTR ERVK 4843 4991 -1559 4 1092 22017 64 27 9 chr17 66531815 66534101 -28738550 - Lx3_Mus LINE L1 0 7009 4687 4 1092 281 26 26 0 chr17 66534101 66534139 -28738512 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 1092 1140 52 0 0 chr17 66534140 66534275 -28738376 - B1_Mm SINE Alu -12 135 1 4 1092 22017 65 8 15 chr17 66534275 66535492 -28737159 - Lx3_Mus LINE L1 -1200 4686 3485 4 1092 1595 52 0 0 chr17 66535492 66535684 -28736967 - B2_Mm1t SINE B2 0 193 2 4 1092 22017 65 8 15 chr17 66535684 66536209 -28736442 - Lx3_Mus LINE L1 -2402 3484 2956 4 1092 1272 71 7 15 chr17 66536209 66536622 -28736029 + (TTTC)n Simple_repeat Simple_repeat 1 409 0 4 1092 1008 60 15 7 chr17 66536622 66536757 -28735894 + B1_Mm SINE Alu 12 147 0 4 1092 221 150 0 0 chr17 66536758 66536798 -28735853 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 5 1092 1418 79 19 29 chr17 66536800 66537009 -28735642 - Lx3_Mus LINE L1 -2919 2967 2761 4 1092 489 324 33 16 chr17 66537364 66537546 -28735105 + MYSERV-int LTR ERVK 4980 5164 -1386 4 1092 216 0 0 0 chr17 66537563 66537587 -28735064 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1092 3677 57 21 17 chr17 66537964 66538444 -28734207 + RLTR45 LTR ERVK 1 482 0 5 1092 207 0 0 0 chr17 66539834 66539857 -28732794 + (CCA)n Simple_repeat Simple_repeat 1 23 0 5 1092 198 0 0 0 chr17 66545580 66545602 -28727049 + (TCTG)n Simple_repeat Simple_repeat 2 23 0 5 1092 2057 114 36 0 chr17 66548000 66548308 -28724343 - ORR1A2 LTR MaLR -8 319 1 5 1092 858 308 73 29 chr17 66550227 66550611 -28722040 - MTD LTR MaLR -9 410 10 5 1092 202 0 0 83 chr17 66550665 66550701 -28721950 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 5 1092 2914 106 98 12 chr17 66550712 66551200 -28721451 - Lx2A LINE L1 -1 7007 6478 5 1092 21 0 0 0 chr17 66551537 66551558 -28721093 + AT_rich Low_complexity Low_complexity 1 21 0 5 1092 6246 188 47 50 chr17 66551577 66552551 -28720100 - Lx2B LINE L1 -23 6977 6004 6 1092 1137 72 83 0 chr17 66552551 66552731 -28719920 - Lx3_Mus LINE L1 -4 7005 6811 6 1092 6246 188 47 50 chr17 66552731 66552947 -28719704 - Lx2B LINE L1 -997 6003 5797 6 1092 1382 55 72 0 chr17 66552947 66553128 -28719523 - B2_Mm2 SINE B2 0 195 2 6 1092 6246 158 20 20 chr17 66553128 66553635 -28719016 - Lx2B LINE L1 -89 5797 5291 6 1092 25 0 0 0 chr17 66553636 66553661 -28718990 + AT_rich Low_complexity Low_complexity 1 25 0 6 1092 1864 148 21 155 chr17 66553662 66553948 -28718703 - Lx2 LINE L1 -7 6990 6753 6 1092 1692 31 0 0 chr17 66553948 66554140 -28718511 - B2_Mm1a SINE B2 0 193 2 6 1092 1864 148 21 155 chr17 66554140 66554318 -28718333 - Lx2 LINE L1 -245 6752 6588 6 1092 436 221 106 8 chr17 66554567 66554690 -28717961 + B1_Mur2 SINE Alu 15 149 0 6 1092 346 235 6 36 chr17 66554698 66554866 -28717785 + GA-rich Low_complexity Low_complexity 3 165 0 6 1092 385 307 125 49 chr17 66554912 66555385 -28717266 + L1M2 LINE L1 4760 5268 -875 6 1092 762 268 30 46 chr17 66555638 66555982 -28716669 + MTC LTR MaLR 88 421 0 6 1092 756 163 22 7 chr17 66556248 66556384 -28716267 - B1_Mus1 SINE Alu -8 140 3 7 1092 306 50 0 0 chr17 66558026 66558066 -28714585 + (TTCA)n Simple_repeat Simple_repeat 2 41 0 7 1092 233 225 66 66 chr17 66559641 66559717 -28712934 - MLT1A0 LTR MaLR -114 251 176 7 1092 903 243 113 35 chr17 66561532 66561877 -28710774 + ORR1D1 LTR MaLR 1 372 -2 7 1092 291 193 18 0 chr17 66563833 66563890 -28708761 - MuRRS4-int LTR ERV1 -2681 2382 2325 7 1092 198 91 0 0 chr17 66564154 66564187 -28708464 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 7 1092 268 96 0 55 chr17 66564568 66564623 -28708028 + GA-rich Low_complexity Low_complexity 3 54 0 7 1092 2633 197 46 19 chr17 66564664 66565203 -28707448 + RMER15 LTR ERVL 22 575 0 7 1092 261 342 56 0 chr17 66565792 66565953 -28706698 + L1M3 LINE L1 5476 5645 -526 7 1092 844 208 202 0 chr17 66566363 66566536 -28706115 + B3 SINE B2 1 208 -8 7 1092 1730 146 31 10 chr17 66566571 66566862 -28705789 + Lx LINE L1 6357 6653 -1 8 1092 452 233 39 0 chr17 66567253 66567356 -28705295 + B3 SINE B2 1 107 -109 8 1092 2299 112 19 6 chr17 66567356 66567681 -28704970 - ORR1A4 LTR MaLR 0 329 1 8 1092 653 320 45 0 chr17 66567725 66567925 -28704726 + B3 SINE B2 8 216 0 8 1092 517 329 34 14 chr17 66568299 66568506 -28704145 + B3A SINE B2 2 215 -1 8 1092 364 294 0 0 chr17 66568525 66568617 -28704034 + Tigger7 DNA MER2_type 70 161 -2330 8 1092 545 280 145 0 chr17 66568771 66568957 -28703694 + B3 SINE B2 4 216 0 8 1092 224 217 0 0 chr17 66569450 66569496 -28703155 + A-rich Low_complexity Low_complexity 5 50 0 8 1092 198 0 0 0 chr17 66569681 66569703 -28702948 + (T)n Simple_repeat Simple_repeat 1 22 0 8 1092 288 0 0 0 chr17 66569760 66569792 -28702859 + (A)n Simple_repeat Simple_repeat 1 32 0 8 1092 4688 116 26 34 chr17 66569958 66570752 -28701899 - Lx2 LINE L1 -180 6817 6030 9 1092 1003 57 16 281 chr17 66571096 66571342 -28701309 + B2_Mm2 SINE B2 1 181 -14 9 1092 433 73 0 0 chr17 66571370 66571425 -28701226 + B2_Mm2 SINE B2 47 101 -94 9 1092 290 258 98 30 chr17 66571709 66571841 -28700810 + L1MB1 LINE L1 5906 6046 -122 9 1092 470 143 222 10 chr17 66571841 66571940 -28700711 - MTC LTR MaLR 0 421 302 9 1092 813 174 7 26 chr17 66571934 66572087 -28700564 - MTC LTR MaLR -234 187 38 9 1092 308 288 25 0 chr17 66572435 66572515 -28700136 + ID2 SINE ID 2 83 0 9 1092 407 289 48 66 chr17 66573095 66573262 -28699389 + RCHARR1 DNA MER1_type 275 438 -536 9 1092 363 279 88 26 chr17 66573336 66573450 -28699201 + ID_B1 SINE B4 98 218 -6 9 1092 2434 133 17 39 chr17 66573576 66573989 -28698662 + MTC LTR MaLR 18 421 0 9 1092 248 282 159 43 chr17 66574318 66574362 -28698289 - B4A SINE B4 -29 263 119 9 1092 425 240 27 55 chr17 66574362 66574472 -28698179 - PB1 SINE Alu -7 120 14 1 1092 2163 79 58 42 chr17 66574728 66575058 -28697593 - L1Md_F2 LINE L1 -8 6574 6240 1 1092 602 237 105 42 chr17 66575322 66575560 -28697091 - L1MB3 LINE L1 -3 6180 5928 1 1092 2705 146 95 12 chr17 66575989 66576409 -28696242 - RMER17A2 LTR ERVK -1 905 482 1 1092 294 29 0 0 chr17 66576409 66576444 -28696207 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 1092 2705 146 95 12 chr17 66576444 66576528 -28696123 - RMER17A2 LTR ERVK -425 481 359 1 1092 189 0 0 0 chr17 66576529 66576550 -28696101 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1092 880 84 0 8 chr17 66578145 66578265 -28694386 + B2_Mm2 SINE B2 1 119 -76 1 1092 644 88 56 9 chr17 66578304 66578413 -28694238 - B2_Mm2 SINE B2 0 198 96 1 1092 260 323 0 0 chr17 66578663 66578728 -28693923 - L2a LINE L2 0 3426 3362 1 1092 929 186 96 20 chr17 66578923 66579120 -28693531 - B3 SINE B2 0 216 5 1 1092 263 208 19 0 chr17 66579181 66579234 -28693417 + B3A SINE B2 1 54 -144 1 1092 241 274 53 53 chr17 66579389 66579578 -28693073 + L1M5 LINE L1 5419 5607 -517 1 1092 326 314 113 0 chr17 66579599 66579723 -28692928 - MLT1F2 LTR MaLR 0 560 423 1 1092 550 269 30 141 chr17 66579699 66579794 -28692857 - B4A SINE B4 -114 178 88 1 1092 1341 19 0 31 chr17 66579794 66580376 -28692275 + (TTC)n Simple_repeat Simple_repeat 1 563 0 1 1092 1086 140 0 0 chr17 66580384 66580563 -28692088 + (TCC)n Simple_repeat Simple_repeat 2 180 0 1 1092 550 269 30 141 chr17 66580563 66580653 -28691998 - B4A SINE B4 -205 87 4 1 1092 1360 54 16 0 chr17 66580937 66581122 -28691529 + L1_Mus3 LINE L1 6443 6630 -8 1 1092 1658 31 0 0 chr17 66581204 66581396 -28691255 - B2_Mm1a SINE B2 0 193 2 1 1092 279 0 0 0 chr17 66582578 66582609 -28690042 + (CCCCCA)n Simple_repeat Simple_repeat 2 32 0 1 1092 188 273 106 0 chr17 66583933 66583999 -28688652 + MIRb SINE MIR 106 178 -90 1 1092 198 167 0 0 chr17 66584225 66584261 -28688390 + T-rich Low_complexity Low_complexity 1 36 0 1 1092 1200 27 7 40 chr17 66584263 66584415 -28688236 - B1_Mm SINE Alu 0 147 1 1 1093 230 279 3 17 chr17 66585384 66585454 -28687197 - PB1D7 SINE Alu -1 148 65 1 1093 351 292 53 99 chr17 66585926 66586097 -28686554 + MLT1E LTR MaLR 64 226 -427 1 1093 217 280 77 39 chr17 66586456 66586508 -28686143 + MIRb SINE MIR 163 216 -52 1 1093 822 214 96 0 chr17 66586508 66586686 -28685965 + B3 SINE B2 3 197 -19 1 1093 2363 140 19 79 chr17 66586686 66587167 -28685484 + RLTR11B LTR ERVK 1 452 -1 1 1093 3147 32 73 0 chr17 66587167 66587536 -28685115 + MTA_Mm LTR MaLR 1 396 0 1 1093 217 280 77 39 chr17 66587536 66587559 -28685092 + MIRb SINE MIR 217 241 -27 1 1093 251 225 68 40 chr17 66587696 66587770 -28684881 + MLT1G LTR MaLR 466 541 -50 1 1093 486 172 0 0 chr17 66588584 66588683 -28683968 + CT-rich Low_complexity Low_complexity 2 100 0 1 1093 181 209 22 44 chr17 66590065 66590110 -28682541 - MER5B DNA MER1_type -8 170 127 1 1093 320 245 12 17 chr17 66590342 66590432 -28682219 - ORR1D2 LTR MaLR -4 404 279 1 1093 2328 106 80 8 chr17 66590618 66590892 -28681759 + L1_Mus3 LINE L1 6263 6563 -75 1 1093 186 43 0 0 chr17 66590892 66590915 -28681736 + (AGGGGG)n Simple_repeat Simple_repeat 1 23 0 1 1093 2328 106 80 8 chr17 66590915 66590991 -28681660 + L1_Mus3 LINE L1 6564 6638 0 1 1093 297 0 0 0 chr17 66591001 66591034 -28681617 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 1 1093 387 0 0 0 chr17 66591733 66591776 -28680875 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1093 289 0 0 47 chr17 66592188 66592231 -28680420 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 1 1093 444 37 0 0 chr17 66592661 66592715 -28679936 + (TCCCC)n Simple_repeat Simple_repeat 5 58 0 1 1093 252 361 98 63 chr17 66593150 66593437 -28679214 + MER21B LTR ERV1 1 297 -566 1 1093 546 143 0 0 chr17 66594428 66594519 -28678132 + (CA)n Simple_repeat Simple_repeat 2 92 0 1 1093 291 122 0 0 chr17 66594693 66594742 -28677909 + (TCCC)n Simple_repeat Simple_repeat 4 52 0 1 1093 209 261 56 22 chr17 66594768 66594858 -28677793 + (CATG)n Simple_repeat Simple_repeat 2 94 0 1 1093 369 228 87 29 chr17 66594970 66595074 -28677577 - B4A SINE B4 -157 135 26 1 1093 316 321 152 18 chr17 66595633 66595798 -28676853 + MIRb SINE MIR 68 254 -14 1 1093 347 283 45 54 chr17 66597099 66597114 -28675537 - PB1D10 SINE Alu -5 112 82 1 1093 362 278 0 62 chr17 66597114 66597128 -28675523 - ID_B1 SINE B4 -51 173 162 1 1093 2625 74 6 0 chr17 66597128 66597453 -28675198 - ORR1A2 LTR MaLR 0 327 1 1 1093 347 283 45 54 chr17 66597453 66597535 -28675116 - PB1D10 SINE Alu -36 81 2 1 1093 261 0 0 0 chr17 66597542 66597571 -28675080 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 1093 4179 164 109 43 chr17 66597698 66598502 -28674149 + RMER13A LTR ERVK 4 860 0 1 1093 243 320 222 67 chr17 66598729 66599025 -28673626 + MLT2F LTR ERVL 268 609 -54 1 1093 228 130 0 0 chr17 66599310 66599356 -28673295 + (TC)n Simple_repeat Simple_repeat 1 46 0 1 1093 421 206 8 15 chr17 66599357 66599490 -28673161 + (TATG)n Simple_repeat Simple_repeat 4 135 0 1 1093 1616 191 0 0 chr17 66599514 66599813 -28672838 + L1_Mur1 LINE L1 5548 5846 -40 1 1093 210 86 0 28 chr17 66599813 66599849 -28672802 + B2_Mm1t SINE B2 2 36 -157 1 1093 362 165 0 12 chr17 66599875 66599955 -28672696 + (TATG)n Simple_repeat Simple_repeat 2 80 0 1 1093 486 248 56 0 chr17 66599959 66600084 -28672567 - ID_B1 SINE B4 -1 223 92 1 1093 2482 156 76 6 chr17 66600555 66600936 -28671715 + RLTR16 LTR ERVK 1 412 -93 1 1093 243 0 0 0 chr17 66600936 66600963 -28671688 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1093 2482 156 76 6 chr17 66600963 66601053 -28671598 + RLTR16 LTR ERVK 413 505 0 1 1093 458 288 7 50 chr17 66601253 66601392 -28671259 - RSINE1 SINE B4 -29 136 4 1 1093 243 308 47 0 chr17 66601400 66601507 -28671144 - L1MB3 LINE L1 0 6183 6072 1 1093 210 71 0 0 chr17 66602575 66602603 -28670048 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1093 2055 84 7 15 chr17 66602918 66603203 -28669448 + MTB_Mm LTR MaLR 115 407 0 1 1093 329 303 56 83 chr17 66603203 66603341 -28669310 - MLT1A0 LTR MaLR -231 134 1 1 1093 554 285 20 14 chr17 66604714 66604860 -28667791 + B1F SINE Alu 2 148 -1 1 1093 6383 94 45 6 chr17 66606009 66606968 -28665683 + Lx LINE L1 5651 6646 -8 1 1093 192 77 0 0 chr17 66606976 66607002 -28665649 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 1 1093 689 61 35 17 chr17 66607145 66607261 -28665390 + (GGGAGA)n Simple_repeat Simple_repeat 3 120 0 1 1093 329 309 12 0 chr17 66607514 66607598 -28665053 + BC1_Mm scRNA scRNA 2 86 -66 1 1093 558 350 31 31 chr17 66608483 66608769 -28663882 - MER110 LTR ERV1 0 491 206 1 1093 1289 58 29 0 chr17 66608791 66608965 -28663686 - B2_Mm2 SINE B2 -1 194 16 1 1093 248 259 84 24 chr17 66609292 66609375 -28663276 - Arthur1A DNA Tip100 -79 98 11 1 1093 232 270 7 7 chr17 66609669 66609818 -28662833 + (TA)n Simple_repeat Simple_repeat 2 150 0 1 1093 837 30 0 0 chr17 66610007 66610107 -28662544 + (TCC)n Simple_repeat Simple_repeat 1 100 0 1 1093 534 291 71 18 chr17 66610619 66610787 -28661864 - B4A SINE B4 -10 282 106 1 1093 1658 234 60 5 chr17 66610820 66611202 -28661449 + MTD LTR MaLR 3 405 -14 1 1093 309 263 13 13 chr17 66611217 66611294 -28661357 - B4A SINE B4 -214 78 2 1 1093 218 344 117 60 chr17 66611698 66611964 -28660687 + L2c LINE L2 3107 3387 0 1 1093 1314 291 115 24 chr17 66611996 66612492 -28660159 - MER89 LTR ERV1 -1 558 18 1 1093 570 211 56 16 chr17 66613341 66613466 -28659185 + B1_Mur1 SINE Alu 9 138 -11 1 1093 396 103 0 0 chr17 66613467 66613525 -28659126 + (GGAA)n Simple_repeat Simple_repeat 1 58 0 1 1093 893 163 6 0 chr17 66613527 66613705 -28658946 + GA-rich Low_complexity Low_complexity 1 179 0 1 1093 6243 77 39 17 chr17 66614005 66614881 -28657770 + Lx3B LINE L1 6079 6973 0 1 1093 657 356 58 15 chr17 66615224 66615271 -28657380 - MER21B LTR ERV1 -27 836 789 1 1093 342 0 0 0 chr17 66615271 66615309 -28657342 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1093 657 356 58 15 chr17 66615309 66615586 -28657065 - MER21B LTR ERV1 -75 788 500 1 1093 345 319 60 112 chr17 66615727 66615942 -28656709 - MER21B LTR ERV1 -560 303 100 1 1093 345 140 0 0 chr17 66616116 66616173 -28656478 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 1093 1207 224 10 102 chr17 66616943 66617355 -28655296 - RMER17C LTR ERVK -35 375 2 1 1093 602 314 22 0 chr17 66618321 66618506 -28654145 - B3A SINE B2 -9 189 1 1 1093 447 316 41 31 chr17 66618638 66618834 -28653817 + LTR48 LTR ERV1 590 787 0 1 1093 343 352 121 47 chr17 66618873 66619195 -28653456 + MamRep434 DNA TcMar 4 349 -77 1 1093 470 287 27 11 chr17 66619418 66619601 -28653050 + MER57A-int LTR ERV1 5798 5983 -204 1 1093 271 81 0 0 chr17 66619943 66619980 -28652671 - B1_Mm SINE Alu -11 136 100 1 1093 234 0 0 0 chr17 66620085 66620111 -28652540 + (CTTG)n Simple_repeat Simple_repeat 4 29 0 1 1093 384 307 34 82 chr17 66620157 66620363 -28652288 - MER20 DNA MER1_type -13 206 11 1 1093 1439 85 16 0 chr17 66620561 66620750 -28651901 + B2_Mm2 SINE B2 1 192 -3 1 1093 324 0 0 0 chr17 66620975 66621011 -28651640 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 1 1093 244 243 131 18 chr17 66621261 66621389 -28651262 - MIRc SINE MIR -92 184 45 1 1093 702 181 47 0 chr17 66621823 66621950 -28650701 + B3 SINE B2 1 133 -83 1 1093 187 55 26 53 chr17 66622174 66622212 -28650439 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 1 1093 777 199 25 24 chr17 66622212 66622410 -28650241 - B3 SINE B2 0 195 3 1 1093 605 295 87 79 chr17 66622572 66622837 -28649814 - B4 SINE B4 0 292 26 1 1093 687 25 0 0 chr17 66623969 66624050 -28648601 + (TTCC)n Simple_repeat Simple_repeat 4 84 0 1 1093 309 328 63 56 chr17 66624050 66624192 -28648459 - L1MC3 LINE L1 -1095 6690 6548 1 1093 2330 101 18 70 chr17 66624500 66624885 -28647766 - RLTR8 LTR ERVK 0 365 1 2 1093 729 65 0 0 chr17 66625600 66625692 -28646959 + B1_Mus1 SINE Alu 1 92 -56 2 1093 237 312 78 0 chr17 66627056 66627133 -28645518 - MER34A1 LTR ERV1 -73 514 432 2 1093 226 309 37 0 chr17 66628019 66628100 -28644551 - MIRb SINE MIR -103 165 82 2 1093 271 316 93 26 chr17 66628539 66628809 -28643842 + RMER17D2 LTR ERVK 168 455 -354 2 1093 7411 229 102 24 chr17 66628830 66629145 -28643506 - Lx7 LINE L1 0 7696 7331 2 1093 186 71 0 0 chr17 66629145 66629173 -28643478 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 2 1093 7411 229 102 24 chr17 66629173 66629533 -28643118 - Lx7 LINE L1 -366 7330 6962 2 1093 297 0 0 0 chr17 66629533 66629566 -28643085 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1093 306 0 0 0 chr17 66629566 66629599 -28643052 + (GA)n Simple_repeat Simple_repeat 1 34 0 2 1093 11247 192 41 25 chr17 66629599 66632742 -28639909 - Lx7 LINE L1 -735 6961 3742 2 1093 258 149 141 54 chr17 66632764 66632856 -28639795 - Lx6 LINE L1 -27 7433 7334 2 1093 1184 68 0 0 chr17 66632859 66633005 -28639646 + B1_Mus2 SINE Alu 2 147 0 2 1093 189 0 0 0 chr17 66633009 66633030 -28639621 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 2 1093 393 22 0 0 chr17 66633206 66633252 -28639399 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1093 271 309 41 0 chr17 66634129 66634226 -28638425 + ORR1E LTR MaLR 20 120 -239 2 1093 694 276 63 19 chr17 66634556 66634763 -28637888 + B4A SINE B4 63 278 -14 2 1093 673 246 124 7 chr17 66634770 66635058 -28637593 + ORR1D2 LTR MaLR 3 354 -30 2 1093 309 313 104 79 chr17 66635303 66635619 -28637032 - MER21B LTR ERV1 -159 704 381 2 1093 388 341 115 50 chr17 66635439 66635717 -28636934 - MER77 LTR ERVL -5 602 307 2 1093 246 273 28 83 chr17 66635721 66635829 -28636822 - MER21B LTR ERV1 -615 248 147 2 1093 598 276 15 0 chr17 66636016 66636150 -28636501 - B3 SINE B2 -1 215 80 2 1093 1205 56 0 0 chr17 66636559 66636703 -28635948 - B1_Mus2 SINE Alu -3 144 1 2 1093 312 193 9 35 chr17 66636853 66636862 -28635789 + (TA)n Simple_repeat Simple_repeat 2 10 0 2 1093 189 0 0 0 chr17 66636862 66636883 -28635768 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 1093 312 193 9 35 chr17 66636883 66636986 -28635665 + (TA)n Simple_repeat Simple_repeat 1 100 0 2 1093 386 237 26 0 chr17 66636998 66637074 -28635577 + Tigger5 DNA MER2_type 81 158 -2248 2 1093 515 231 43 31 chr17 66637724 66637885 -28634766 - L1MA4 LINE L1 -3 6297 6135 2 1093 914 320 23 3 chr17 66637947 66638332 -28634319 - L1MA4 LINE L1 -388 5912 5520 2 1093 229 350 76 19 chr17 66638420 66638525 -28634126 - L2b LINE L2 -18 3357 3247 2 1093 712 215 111 35 chr17 66639838 66640036 -28632615 + B3 SINE B2 2 214 -2 2 1093 1446 57 0 6 chr17 66640036 66640212 -28632439 + B2_Mm2 SINE B2 2 176 -19 2 1093 425 267 10 0 chr17 66640287 66640388 -28632263 - ID_B1 SINE B4 -23 201 100 2 1093 271 301 60 0 chr17 66640319 66640402 -28632249 - PB1D7 SINE Alu -30 90 3 2 1093 1552 209 43 45 chr17 66640402 66640777 -28631874 - ORR1D1 LTR MaLR 0 374 1 2 1093 565 183 15 111 chr17 66641029 66641164 -28631487 + ORR1C1 LTR MaLR 1 122 -256 2 1093 1237 106 15 31 chr17 66641552 66641747 -28630904 - B2_Mm2 SINE B2 -3 192 1 2 1093 288 215 55 0 chr17 66641936 66642010 -28630641 - ID4 SINE ID -62 90 5 2 1093 447 320 0 54 chr17 66642851 66642980 -28629671 + B1F1 SINE Alu 1 122 -27 2 1093 596 146 0 0 chr17 66643120 66643209 -28629442 - B2_Mm2 SINE B2 -76 119 31 2 1093 592 214 127 7 chr17 66643772 66643955 -28628696 - ORR1C2 LTR MaLR -9 375 172 2 1093 395 153 10 0 chr17 66643968 66644066 -28628585 + GA-rich Low_complexity Low_complexity 2 100 0 2 1093 832 171 21 52 chr17 66644068 66644259 -28628392 - ORR1C2 LTR MaLR -199 185 1 2 1093 802 305 129 35 chr17 66644378 66644803 -28627848 + MLT1E LTR MaLR 186 650 -3 2 1093 561 51 0 0 chr17 66645997 66646075 -28626576 - L1Md_T LINE L1 0 6582 6505 2 1093 3518 90 8 6 chr17 66646958 66647459 -28625192 - Lx2A1 LINE L1 0 7008 6507 2 1093 3133 70 2 15 chr17 66647546 66647951 -28624700 + MTB LTR MaLR 1 400 0 2 1093 385 316 94 12 chr17 66648359 66648529 -28624122 + MLT1B LTR MaLR 1 184 -206 2 1093 277 195 253 0 chr17 66648564 66648651 -28624000 + MLT1B LTR MaLR 282 390 0 2 1093 241 346 0 58 chr17 66649030 66649116 -28623535 + PB1D10 SINE Alu 1 81 -36 2 1093 189 0 0 0 chr17 66649175 66649196 -28623455 + (TG)n Simple_repeat Simple_repeat 1 21 0 2 1093 228 111 0 0 chr17 66649202 66649238 -28623413 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1093 230 243 13 26 chr17 66649404 66649480 -28623171 - ORR1D1 LTR MaLR -249 118 44 2 1093 374 200 117 62 chr17 66649451 66649579 -28623072 - ORR1D1 LTR MaLR -239 135 1 2 1093 1767 201 24 19 chr17 66649606 66649977 -28622674 + ORR1D1 LTR MaLR 1 373 -1 2 1093 1057 60 60 0 chr17 66650113 66650246 -28622405 + B1_Mm SINE Alu 1 141 -6 2 1093 180 0 0 0 chr17 66650248 66650268 -28622383 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2 1093 273 241 0 0 chr17 66650289 66650347 -28622304 + L1ME2 LINE L1 5928 5985 -179 2 1093 216 0 0 0 chr17 66650792 66650816 -28621835 + (A)n Simple_repeat Simple_repeat 1 24 0 2 1093 280 301 14 0 chr17 66651622 66651695 -28620956 - PB1D10 SINE Alu -42 75 2 2 1093 281 271 22 43 chr17 66651720 66651859 -28620792 - L1ME2z LINE L1 -263 6181 6046 2 1093 646 132 19 9 chr17 66651878 66651985 -28620666 + B1_Mur3 SINE Alu 33 140 -9 2 1093 531 56 0 0 chr17 66651985 66652056 -28620595 + (CA)n Simple_repeat Simple_repeat 2 72 0 2 1093 219 155 35 35 chr17 66652059 66652146 -28620505 + (TA)n Simple_repeat Simple_repeat 2 88 0 2 1093 3600 20 0 0 chr17 66652158 66652554 -28620097 - MTA_Mm LTR MaLR 0 396 1 2 1093 9033 39 9 2 chr17 66652554 66653644 -28619007 - MTA_Mm-int LTR MaLR 0 1098 1 2 1093 2445 21 0 0 chr17 66653644 66653928 -28618723 - MTA_Mm LTR MaLR 0 396 113 2 1093 4479 14 2 0 chr17 66653928 66654420 -28618231 - MT2_Mm LTR ERVL 0 493 1 2 1093 319 0 0 0 chr17 66654420 66654458 -28618193 - MERVL-int LTR ERVL 0 5485 5448 2 1093 384 179 46 35 chr17 66654458 66654545 -28618106 - ORR1A3-int LTR MaLR -1323 640 553 2 1093 48488 15 6 0 chr17 66654545 66659871 -28612780 - MERVL-int LTR ERVL -125 5360 1 2 1093 4479 14 2 0 chr17 66659871 66660363 -28612288 - MT2_Mm LTR ERVL 0 493 1 2 1093 1033 8 0 0 chr17 66660363 66660480 -28612171 - MTA_Mm LTR MaLR -279 117 1 2 1093 498 241 227 6 chr17 66660689 66660852 -28611799 + MTD LTR MaLR 146 344 -75 2 1093 230 293 94 94 chr17 66661150 66661278 -28611373 - L1MCc LINE L1 -6007 416 289 2 1093 4651 130 76 39 chr17 66661280 66662248 -28610403 + L1VL1 LINE L1 194 1215 -2483 2 1093 290 296 98 23 chr17 66662245 66662418 -28610233 - L1MCc LINE L1 -6124 299 114 2 1093 414 0 0 0 chr17 66662469 66662515 -28610136 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1093 572 188 154 0 chr17 66662559 66662676 -28609975 - B3A SINE B2 -60 138 4 2 1093 411 304 84 124 chr17 66663161 66663555 -28609096 - MTEa LTR MaLR 0 379 2 2 1093 2165 127 6 0 chr17 66663627 66663943 -28608708 + ORR1A2 LTR MaLR 1 318 -9 2 1093 199 241 0 79 chr17 66664007 66664070 -28608581 + L2 LINE L2 1881 1938 -1481 2 1093 369 204 43 54 chr17 66665442 66665535 -28607116 - MTEb LTR MaLR -1 378 287 2 1093 300 111 0 0 chr17 66665611 66665656 -28606995 + (GGA)n Simple_repeat Simple_repeat 1 45 0 2 1093 198 0 0 0 chr17 66666169 66666191 -28606460 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1093 761 201 0 82 chr17 66666533 66666619 -28606032 + ORR1D1 LTR MaLR 2 81 -293 2 1093 4165 144 20 16 chr17 66666619 66667308 -28605343 + RLTR17 LTR ERVK 1 692 0 2 1093 768 201 0 82 chr17 66667308 66667405 -28605246 + ORR1D1 LTR MaLR 82 170 -204 2 1093 390 211 31 21 chr17 66667416 66667513 -28605138 + ORR1D1 LTR MaLR 287 384 0 2 1093 243 318 55 141 chr17 66667544 66667672 -28604979 - MER82 DNA MER2_type -531 122 6 2 1093 406 250 0 11 chr17 66667873 66667962 -28604689 + MER44D DNA MER2_type 24 111 -594 2 1093 188 86 0 28 chr17 66667995 66668031 -28604620 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 2 1093 1688 31 0 5 chr17 66668486 66668680 -28603971 - B2_Mm1t SINE B2 0 193 1 2 1093 5588 42 3 0 chr17 66668909 66669575 -28603076 - L1Md_A LINE L1 0 6582 5915 2 1093 337 74 87 14 chr17 66669575 66669634 -28603017 - L1_Mus3 LINE L1 -29 6609 6545 2 1093 243 311 93 13 chr17 66669662 66669812 -28602839 + MER44D DNA MER2_type 535 696 -9 2 1093 657 38 0 0 chr17 66670347 66670427 -28602224 + (TG)n Simple_repeat Simple_repeat 2 81 0 2 1093 504 0 0 0 chr17 66670738 66670794 -28601857 + (TC)n Simple_repeat Simple_repeat 2 57 0 2 1093 406 192 12 93 chr17 66670799 66670885 -28601766 - PB1D10 SINE Alu -8 109 31 2 1093 450 0 0 0 chr17 66671733 66671783 -28600868 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1093 242 208 0 127 chr17 66671786 66671841 -28600810 - PB1D10 SINE Alu -8 109 62 2 1093 27 0 0 0 chr17 66672267 66672294 -28600357 + GC_rich Low_complexity Low_complexity 1 27 0 2 1093 1695 224 3 0 chr17 66673586 66673903 -28598748 + RLTR14 LTR ERV1 65 382 0 2 1093 315 0 0 0 chr17 66674019 66674054 -28598597 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1093 1950 171 75 35 chr17 66676947 66677306 -28595345 + MTC LTR MaLR 1 374 -47 2 1093 993 228 14 19 chr17 66677306 66677516 -28595135 + B3 SINE B2 3 211 -5 2 1093 1559 68 0 0 chr17 66678131 66678322 -28594329 - B2_Mm1a SINE B2 -2 191 1 2 1093 2302 101 3 65 chr17 66678681 66679032 -28593619 - ORR1A4 LTR MaLR 0 329 1 2 1093 319 164 0 35 chr17 66679050 66679107 -28593544 + B1_Mus1 SINE Alu 6 60 -88 2 1093 214 0 0 157 chr17 66679108 66679210 -28593441 + (CAGAG)n Simple_repeat Simple_repeat 5 90 0 2 1093 442 144 178 0 chr17 66679213 66679303 -28593348 + B1_Mus2 SINE Alu 42 147 0 2 1093 194 0 39 0 chr17 66679305 66679331 -28593320 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1093 1222 95 6 22 chr17 66679648 66679831 -28592820 - B2_Mm2 SINE B2 -14 181 2 2 1093 446 204 21 0 chr17 66680112 66680205 -28592446 + Lx8 LINE L1 7027 7121 -352 2 1093 1479 78 0 5 chr17 66680435 66680628 -28592023 - B2_Mm2 SINE B2 -1 194 3 2 1093 1797 164 71 12 chr17 66680902 66681241 -28591410 + Lx2A1 LINE L1 6650 7008 0 2 1093 347 0 23 0 chr17 66681474 66681517 -28591134 + (CCAA)n Simple_repeat Simple_repeat 1 44 0 3 1093 1953 183 113 18 chr17 66682091 66682541 -28590110 + MT2A LTR ERVL 1 493 -40 3 1093 246 81 0 0 chr17 66683159 66683196 -28589455 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 3 1093 768 337 96 14 chr17 66685315 66685950 -28586701 - L1MB4 LINE L1 -2 6178 5492 3 1093 406 228 43 11 chr17 66689136 66689229 -28583422 - B1_Mur2 SINE Alu -43 106 11 3 1093 573 15 0 0 chr17 66691353 66691419 -28581232 + (TC)n Simple_repeat Simple_repeat 2 67 0 3 1093 315 264 103 0 chr17 66691425 66691512 -28581139 - PB1D9 SINE Alu -21 99 4 3 1093 190 0 0 62 chr17 66691549 66691581 -28581070 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 3 1093 252 0 0 0 chr17 66694764 66694792 -28577859 + (A)n Simple_repeat Simple_repeat 1 28 0 3 1093 187 125 0 30 chr17 66695029 66695062 -28577589 - MIR SINE MIR -61 147 116 3 1093 192 77 0 0 chr17 66696071 66696097 -28576554 + (TG)n Simple_repeat Simple_repeat 2 27 0 3 1093 292 174 56 28 chr17 66698524 66698595 -28574056 + ID4_ SINE ID 1 73 -10 3 1093 234 0 0 0 chr17 66699011 66699037 -28573614 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1093 23 0 0 0 chr17 66699432 66699455 -28573196 + AT_rich Low_complexity Low_complexity 1 23 0 3 1093 25 0 0 0 chr17 66699722 66699747 -28572904 + AT_rich Low_complexity Low_complexity 1 25 0 3 1093 642 314 64 23 chr17 66701340 66701604 -28571047 + RMER15 LTR ERVL 287 561 -14 3 1093 253 314 0 55 chr17 66702757 66702848 -28569803 + ORR1D2 LTR MaLR 1 86 -293 3 1093 315 319 87 70 chr17 66702907 66703079 -28569572 + ORR1D2 LTR MaLR 56 230 -140 3 1093 241 220 92 0 chr17 66703312 66703421 -28569230 + (CTGTG)n Simple_repeat Simple_repeat 1 119 0 3 1093 366 195 51 25 chr17 66704532 66704611 -28568040 + MTC LTR MaLR 1 81 -340 3 1093 1173 126 0 6 chr17 66704611 66704767 -28567884 + B2_Mm2 SINE B2 2 157 -38 3 1093 204 40 0 0 chr17 66704767 66704792 -28567859 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 3 1093 1173 126 0 6 chr17 66704792 66704811 -28567840 + B2_Mm2 SINE B2 158 176 -19 3 1093 1527 174 140 16 chr17 66704810 66705125 -28567526 + MTC LTR MaLR 68 421 0 3 1093 298 266 144 44 chr17 66705189 66705460 -28567191 + L1MEf LINE L1 1511 1808 -4392 3 1093 254 221 195 0 chr17 66705531 66705608 -28567043 - PB1D7 SINE Alu -28 92 1 3 1093 196 159 65 43 chr17 66706812 66706858 -28565793 + MIR3 SINE MIR 120 166 -42 3 1093 856 132 47 0 chr17 66706945 66707074 -28565577 + B1_Mur1 SINE Alu 15 149 0 3 1093 433 279 0 31 chr17 66708224 66708320 -28564331 + PB1D10 SINE Alu 13 105 -12 3 1093 349 288 184 7 chr17 66708703 66708850 -28563801 - RMER30 DNA MER1_type -23 179 7 3 1093 1163 96 18 0 chr17 66709117 66709269 -28563382 + B2_Mm2 SINE B2 1 155 -40 3 1093 192 40 0 0 chr17 66709269 66709294 -28563357 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1093 1163 96 18 0 chr17 66709294 66709308 -28563343 + B2_Mm2 SINE B2 156 169 -26 3 1093 568 186 26 9 chr17 66709437 66709551 -28563100 + B3 SINE B2 1 116 -100 3 1093 23 33 0 0 chr17 66710170 66710200 -28562451 + AT_rich Low_complexity Low_complexity 1 30 0 3 1093 586 192 0 9 chr17 66710225 66710330 -28562321 - B3 SINE B2 -112 104 1 3 1093 246 263 1 16 chr17 66710706 66710780 -28561871 + PB1D9 SINE Alu 52 124 -25 3 1093 204 40 0 0 chr17 66711882 66711907 -28560744 + (C)n Simple_repeat Simple_repeat 1 25 0 3 1093 246 197 49 0 chr17 66712291 66712352 -28560299 + (GTCTG)n Simple_repeat Simple_repeat 1 64 0 3 1093 280 284 15 0 chr17 66712469 66712536 -28560115 - tRNA-Ala-GCY_ tRNA tRNA -4 71 4 3 1093 327 258 0 0 chr17 66712479 66712545 -28560106 - ID2 SINE ID -17 66 1 3 1093 443 217 32 21 chr17 66712563 66712657 -28559994 - B1F SINE Alu -45 104 10 3 1093 1375 104 0 15 chr17 66712783 66712978 -28559673 + B2_Mm2 SINE B2 3 194 -1 3 1093 187 206 67 0 chr17 66713774 66713939 -28558712 + (CACTG)n Simple_repeat Simple_repeat 1 176 0 3 1093 516 32 0 0 chr17 66714965 66715027 -28557624 + (TAGA)n Simple_repeat Simple_repeat 1 62 0 3 1094 275 275 32 42 chr17 66716556 66716578 -28556073 + MT2B2 LTR ERVL 148 168 -416 3 1094 307 289 119 13 chr17 66716578 66716711 -28555940 + PB1D10 SINE Alu 3 149 0 3 1094 941 196 36 26 chr17 66716717 66716911 -28555740 + B3 SINE B2 1 196 -20 3 1094 716 22 0 0 chr17 66717373 66717465 -28555186 + L1Md_T LINE L1 6491 6582 0 3 1094 371 294 50 8 chr17 66718441 66718561 -28554090 - PB1 SINE Alu -2 125 1 3 1094 328 299 61 20 chr17 66720135 66720234 -28552417 + Tigger7 DNA MER2_type 5 107 -2384 3 1094 371 361 76 24 chr17 66720235 66720445 -28552206 + Tigger7 DNA MER2_type 2269 2489 -2 3 1094 1155 68 0 14 chr17 66721533 66721681 -28550970 + B1_Mm SINE Alu 2 147 0 3 1094 1027 122 0 7 chr17 66721716 66721865 -28550786 + B1_Mus1 SINE Alu 1 148 0 3 1094 482 218 71 16 chr17 66721867 66721993 -28550658 - B1F2 SINE Alu -16 133 1 3 1094 279 133 0 0 chr17 66722501 66722546 -28550105 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 3 1094 829 254 0 31 chr17 66722547 66722742 -28549909 - B3A SINE B2 -7 191 3 3 1094 201 94 0 0 chr17 66724151 66724183 -28548468 + (GGA)n Simple_repeat Simple_repeat 3 34 0 3 1094 430 198 25 0 chr17 66725124 66725205 -28547446 + ID4_ SINE ID 1 83 0 3 1094 207 0 0 0 chr17 66725520 66725543 -28547108 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1094 360 277 94 14 chr17 66728152 66728323 -28544328 + L1MEc LINE L1 2174 2296 -4104 3 1094 567 144 0 0 chr17 66729860 66729957 -28542694 + (CA)n Simple_repeat Simple_repeat 2 98 0 3 1094 1558 42 16 0 chr17 66730088 66730277 -28542374 + B2_Mm1t SINE B2 2 193 0 3 1094 198 0 0 0 chr17 66731659 66731681 -28540970 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 3 1094 855 156 0 113 chr17 66731716 66731875 -28540776 - B1_Mur3 SINE Alu -7 142 2 3 1094 465 19 0 0 chr17 66732017 66732071 -28540580 + (TCCA)n Simple_repeat Simple_repeat 1 54 0 3 1094 1528 240 19 41 chr17 66734057 66734426 -28538225 + ORR1D2 LTR MaLR 9 369 -1 3 1094 257 100 20 0 chr17 66735054 66735104 -28537547 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 3 1094 770 272 92 19 chr17 66735739 66736041 -28536610 - MER2 DNA MER2_type -1 344 14 3 1094 407 97 0 46 chr17 66736259 66736324 -28536327 + B1_Mus2 SINE Alu 77 138 -9 3 1094 392 184 10 94 chr17 66737215 66737311 -28535340 + B2_Mm2 SINE B2 64 151 -44 3 1094 203 29 0 81 chr17 66737313 66737350 -28535301 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 3 1094 760 84 57 32 chr17 66737354 66737477 -28535174 + B1_Mus1 SINE Alu 2 127 -21 3 1094 732 135 0 0 chr17 66738180 66738291 -28534360 + B3 SINE B2 1 111 -105 3 1094 462 263 71 0 chr17 66739428 66739527 -28533124 - RSINE1 SINE B4 -57 108 3 3 1094 697 270 153 88 chr17 66739837 66740190 -28532461 - MTE2a LTR MaLR -3 376 1 3 1094 840 240 215 10 chr17 66740351 66740658 -28531993 - ORR1D2 LTR MaLR 0 370 1 3 1094 813 309 77 13 chr17 66740877 66741175 -28531476 + MLT1A LTR MaLR 8 324 -50 3 1094 2478 237 40 25 chr17 66741177 66741912 -28530739 - RCHARR1 DNA MER1_type 0 974 152 3 1094 264 167 0 0 chr17 66742175 66742223 -28530428 + CT-rich Low_complexity Low_complexity 2 49 0 3 1094 217 326 72 92 chr17 66743151 66743303 -28529348 + B1F1 SINE Alu 1 149 0 3 1094 248 308 96 37 chr17 66743318 66743453 -28529198 - Tigger5 DNA MER2_type -21 2385 2243 3 1094 460 349 29 17 chr17 66743444 66743619 -28529032 - Tigger5 DNA MER2_type -2228 178 2 3 1094 1259 197 178 10 chr17 66745153 66745456 -28527195 - ORR1D1 LTR MaLR -20 354 1 3 1094 447 158 167 10 chr17 66745528 66745630 -28527021 + PB1D9 SINE Alu 3 120 0 3 1094 214 143 0 67 chr17 66745783 66745828 -28526823 + B1_Mus1 SINE Alu 6 47 -101 3 1094 351 0 0 0 chr17 66746243 66746282 -28526369 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1094 3179 40 45 0 chr17 66746553 66746932 -28525719 - MTA_Mm LTR MaLR 0 396 1 3 1094 615 322 62 29 chr17 66747693 66747933 -28524718 - B4A SINE B4 -38 254 7 3 1094 471 325 188 14 chr17 66748070 66748509 -28524142 - Lx8 LINE L1 -100 7373 6858 3 1094 1312 20 0 0 chr17 66748713 66748859 -28523792 - B1_Mm SINE Alu 0 147 2 3 1094 387 301 70 0 chr17 66748994 66749150 -28523501 + L1MB4 LINE L1 6014 6180 0 3 1094 3135 64 0 12 chr17 66750156 66750568 -28522083 + L1_Mus4 LINE L1 6130 6536 -100 3 1094 205 234 129 94 chr17 66754541 66754626 -28518025 + MIRm SINE MIR 25 112 -164 3 1094 337 83 0 0 chr17 66755238 66755286 -28517365 - Lx LINE L1 -617 6037 5990 3 1094 4601 76 22 11 chr17 66755287 66755911 -28516740 + Lx LINE L1 6022 6652 -2 3 1094 687 318 94 15 chr17 66756225 66756631 -28516020 + LTR40c LTR ERVL 16 453 -12 3 1094 734 234 79 11 chr17 66756697 66756887 -28515764 + B3 SINE B2 1 203 -13 3 1094 209 33 33 0 chr17 66757024 66757054 -28515597 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1094 329 47 0 23 chr17 66757682 66757726 -28514925 - MTB_Mm LTR MaLR -364 43 1 3 1094 1232 72 12 6 chr17 66759502 66759670 -28512981 + B2_Mm2 SINE B2 2 170 -25 3 1094 233 361 20 40 chr17 66759828 66759929 -28512722 - MIRc SINE MIR -118 150 52 3 1094 186 43 0 0 chr17 66760118 66760141 -28512510 + (TC)n Simple_repeat Simple_repeat 1 23 0 3 1094 315 245 35 121 chr17 66761018 66761134 -28511517 + RSINE1 SINE B4 57 162 -3 3 1094 286 280 23 47 chr17 66762869 66762955 -28509696 + MLT1C LTR MaLR 355 438 -29 3 1094 447 183 276 9 chr17 66764376 66764492 -28508159 + B1_Mur1 SINE Alu 1 147 -2 3 1094 598 334 55 64 chr17 66764724 66764864 -28507787 + L1MB3 LINE L1 5333 5489 -694 3 1094 675 233 20 20 chr17 66764864 66765013 -28507638 + B1_Mur1 SINE Alu 1 149 0 4 1094 598 334 55 64 chr17 66765013 66765208 -28507443 + L1MB3 LINE L1 5490 5670 -513 3 1094 742 174 253 11 chr17 66765208 66765382 -28507269 + B3 SINE B2 1 216 0 4 1094 598 334 55 64 chr17 66765382 66765608 -28507043 + L1MB3 LINE L1 5671 5890 -293 3 1094 203 227 72 93 chr17 66767338 66767435 -28505216 + MIRc SINE MIR 107 201 -67 4 1094 477 0 0 0 chr17 66767545 66767598 -28505053 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1094 486 0 0 0 chr17 66767598 66767651 -28505000 + (GA)n Simple_repeat Simple_repeat 2 55 0 4 1094 599 264 21 0 chr17 66767670 66767810 -28504841 - B3A SINE B2 -55 143 1 4 1094 333 0 0 0 chr17 66768737 66768774 -28503877 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 1094 180 0 0 0 chr17 66769040 66769060 -28503591 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1094 425 195 47 71 chr17 66769141 66769268 -28503383 + B1_Mus1 SINE Alu 25 148 0 4 1094 323 135 0 55 chr17 66769311 66769366 -28503285 - B1_Mm SINE Alu -23 124 73 4 1094 1314 83 61 0 chr17 66769389 66769570 -28503081 - B2_Mm2 SINE B2 -3 192 1 4 1094 322 326 52 15 chr17 66770157 66770291 -28502360 - MER5B DNA MER1_type -30 148 10 4 1094 298 308 33 41 chr17 66770774 66770896 -28501755 + MER20 DNA MER1_type 99 219 0 4 1094 683 221 15 7 chr17 66771891 66772028 -28500623 - B1_Mur1 SINE Alu -11 138 1 4 1094 189 0 0 0 chr17 66772485 66772506 -28500145 + (CCTAA)n Simple_repeat Simple_repeat 4 24 0 4 1094 730 216 0 22 chr17 66772594 66772731 -28499920 + B1_Mur4 SINE Alu 2 135 -15 4 1094 2019 100 18 80 chr17 66772731 66772788 -28499863 + ORR1A2 LTR MaLR 2 57 -270 4 1094 1390 81 27 0 chr17 66772788 66772974 -28499677 + B2_Mm1a SINE B2 1 191 -2 4 1094 2019 100 18 80 chr17 66772974 66773253 -28499398 + ORR1A2 LTR MaLR 58 317 -10 4 1094 234 0 0 0 chr17 66773281 66773307 -28499344 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 1094 534 162 89 9 chr17 66773570 66773682 -28498969 - B1_Mur2 SINE Alu 0 149 29 4 1094 310 297 10 0 chr17 66773738 66773839 -28498812 + L1MD LINE L1 5591 5692 -550 4 1094 652 321 207 45 chr17 66773879 66773942 -28498709 - MER21B LTR ERV1 -30 833 754 4 1094 3225 90 20 45 chr17 66773942 66774429 -28498222 + MT2C_Mm LTR ERVL 1 475 0 4 1094 652 321 207 45 chr17 66774429 66774920 -28497731 - MER21B LTR ERV1 -110 753 189 4 1094 2252 137 107 8 chr17 66774929 66775312 -28497339 - MTC LTR MaLR 0 421 1 4 1094 289 298 99 53 chr17 66775400 66775531 -28497120 - MER21B LTR ERV1 -688 175 39 4 1094 227 276 93 19 chr17 66775722 66775829 -28496822 - MER44B DNA MER2_type -103 447 333 4 1094 327 320 20 10 chr17 66775812 66775913 -28496738 - MER44B DNA MER2_type -445 105 4 4 1094 1302 20 0 0 chr17 66777595 66777741 -28494910 + B1_Mm SINE Alu 2 147 0 4 1094 271 123 17 34 chr17 66778109 66778168 -28494483 + (CAGA)n Simple_repeat Simple_repeat 1 58 0 4 1094 1041 68 0 0 chr17 66779113 66779246 -28493405 + B1_Mus1 SINE Alu 15 147 -1 4 1094 190 45 20 102 chr17 66779251 66779300 -28493351 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 4 1094 1739 85 0 8 chr17 66779300 66779536 -28493115 + ORR1A3 LTR MaLR 93 326 0 4 1094 1015 261 104 48 chr17 66779796 66780387 -28492264 + Lx7 LINE L1 6340 7000 -696 4 1094 468 149 0 13 chr17 66780387 66780462 -28492189 - B1_Mur2 SINE Alu -44 105 32 4 1094 27 0 0 0 chr17 66780465 66780492 -28492159 + AT_rich Low_complexity Low_complexity 1 27 0 4 1094 233 215 29 58 chr17 66780501 66780570 -28492081 - ID2 SINE ID -16 67 1 4 1094 326 280 13 209 chr17 66780700 66780935 -28491716 - Lx7 LINE L1 -520 7176 6988 4 1094 1724 21 0 0 chr17 66781258 66781450 -28491201 + B2_Mm1a SINE B2 2 193 0 4 1094 875 291 67 13 chr17 66783324 66783623 -28489028 + MER2 DNA MER2_type 2 316 -29 4 1094 338 159 14 0 chr17 66783635 66783704 -28488947 + (TATG)n Simple_repeat Simple_repeat 3 72 0 4 1094 423 0 0 0 chr17 66784732 66784779 -28487872 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 4 1094 606 234 34 47 chr17 66784874 66785022 -28487629 - B1_Mur1 SINE Alu -3 146 1 4 1094 313 299 46 98 chr17 66785022 66785048 -28487603 - B4 SINE B4 -70 222 58 4 1094 373 269 0 0 chr17 66785224 66785302 -28487349 - MER58C DNA MER1_type -11 204 127 4 1094 831 50 0 0 chr17 66785838 66785938 -28486713 + B2_Mm2 SINE B2 2 101 -94 4 1094 394 92 160 49 chr17 66786025 66786143 -28486508 + B2_Mm2 SINE B2 47 192 -1 4 1094 1142 212 72 86 chr17 66786155 66786487 -28486164 - MTD LTR MaLR 0 419 5 4 1094 891 254 81 0 chr17 66786764 66786961 -28485690 - B3 SINE B2 -1 215 3 4 1094 688 267 27 22 chr17 66787268 66787452 -28485199 - B3 SINE B2 0 216 32 4 1094 279 0 0 0 chr17 66788026 66788057 -28484594 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 4 1094 200 331 44 22 chr17 66789008 66789144 -28483507 + L2a LINE L2 2772 2910 -509 4 1094 299 260 136 26 chr17 66789259 66789429 -28483222 + L2a LINE L2 3180 3422 -4 4 1094 1264 14 14 0 chr17 66789529 66789674 -28482977 + B1_Mus2 SINE Alu 1 147 0 4 1094 487 109 30 0 chr17 66789674 66789775 -28482876 + (CAAAA)n Simple_repeat Simple_repeat 1 104 0 4 1094 1171 225 70 28 chr17 66790778 66791062 -28481589 + RMER5 LTR ERV1 4 299 -235 4 1094 1121 75 7 7 chr17 66791062 66791210 -28481441 + B1_Mus1 SINE Alu 1 148 0 4 1094 594 103 0 0 chr17 66791219 66791306 -28481345 + (GGAGA)n Simple_repeat Simple_repeat 3 89 0 4 1094 1008 67 22 0 chr17 66791309 66791444 -28481207 + B1_Mm SINE Alu 9 146 -1 4 1094 1233 190 77 13 chr17 66791467 66791702 -28480949 + RMER5 LTR ERV1 285 534 0 4 1094 956 146 0 0 chr17 66792658 66792802 -28479849 + B1_Mur4 SINE Alu 1 144 -6 4 1094 1079 45 75 0 chr17 66794028 66794162 -28478489 + B1_Mus1 SINE Alu 1 144 -4 4 1094 468 51 0 0 chr17 66794169 66794228 -28478423 + (GGAA)n Simple_repeat Simple_repeat 3 61 0 4 1094 716 33 0 11 chr17 66794605 66794697 -28477954 + (TTCC)n Simple_repeat Simple_repeat 2 92 0 4 1094 212 0 0 35 chr17 66795409 66795438 -28477213 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1094 24 0 0 0 chr17 66798279 66798303 -28474348 + GC_rich Low_complexity Low_complexity 1 24 0 4 1094 29 28 0 0 chr17 66798410 66798446 -28474205 + GC_rich Low_complexity Low_complexity 1 36 0 4 1094 26 0 0 0 chr17 66798645 66798671 -28473980 + GC_rich Low_complexity Low_complexity 1 26 0 4 1094 242 305 131 38 chr17 66799663 66799831 -28472820 - MIRm SINE MIR -86 190 11 4 1094 240 254 13 90 chr17 66799851 66799929 -28472722 + MIR3 SINE MIR 90 161 -47 4 1094 216 0 0 0 chr17 66800419 66800443 -28472208 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1094 333 0 0 0 chr17 66801214 66801251 -28471400 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 1094 2855 159 14 56 chr17 66801462 66802014 -28470637 + RLTR24 LTR ERV1 1 529 0 4 1094 336 312 107 31 chr17 66802022 66802181 -28470470 + LTR33A LTR ERVL 64 234 -286 4 1094 188 333 74 0 chr17 66802513 66802594 -28470057 + MIRc SINE MIR 4 90 -178 4 1094 278 278 20 20 chr17 66802628 66802727 -28469924 + C-rich Low_complexity Low_complexity 3 101 0 4 1094 248 77 26 0 chr17 66802732 66802771 -28469880 + (TC)n Simple_repeat Simple_repeat 1 40 0 4 1094 315 0 0 0 chr17 66802771 66802806 -28469845 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 1094 340 260 10 40 chr17 66802808 66802908 -28469743 - PB1 SINE Alu -20 107 11 4 1094 378 57 0 0 chr17 66803131 66803184 -28469467 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1094 1154 71 0 0 chr17 66803237 66803378 -28469273 + B1_Mus1 SINE Alu 2 142 -6 4 1094 947 185 3 3 chr17 66803378 66803706 -28468945 + GA-rich Low_complexity Low_complexity 1 328 0 4 1094 729 150 21 50 chr17 66803790 66803930 -28468721 - B1_Mur1 SINE Alu -11 138 3 4 1094 216 0 0 0 chr17 66803935 66803959 -28468692 + (TTG)n Simple_repeat Simple_repeat 2 25 0 4 1094 1262 93 54 5 chr17 66804702 66804886 -28467765 + B2_Mm1t SINE B2 1 193 0 4 1094 884 144 0 46 chr17 66804941 66805094 -28467557 + B1_Mus1 SINE Alu 3 148 0 4 1094 626 276 26 47 chr17 66805106 66805296 -28467355 - B3A SINE B2 -8 190 5 4 1094 532 249 88 71 chr17 66805821 66806003 -28466648 - B2_Mm2 SINE B2 -10 185 1 4 1094 226 274 65 0 chr17 66806003 66806057 -28466594 + B3 SINE B2 76 133 -83 4 1094 373 206 10 10 chr17 66806060 66806163 -28466488 + CT-rich Low_complexity Low_complexity 1 103 0 4 1094 815 171 7 52 chr17 66806231 66806385 -28466266 + B1_Mm SINE Alu 1 147 0 4 1094 24 0 0 0 chr17 66806410 66806434 -28466217 + AT_rich Low_complexity Low_complexity 1 24 0 4 1094 2742 71 5 24 chr17 66806516 66806891 -28465760 - RLTR9A LTR ERVK 0 368 1 4 1094 403 227 21 0 chr17 66806942 66807039 -28465612 - PB1D10 SINE Alu -18 99 1 4 1094 233 286 32 0 chr17 66807218 66807281 -28465370 - MER94 DNA AcHobo -65 69 5 4 1094 407 326 75 16 chr17 66807586 66807773 -28464878 + MER90a LTR ERV1 1 198 -416 4 1094 938 145 0 14 chr17 66807805 66807952 -28464699 - B1_Mus1 SINE Alu 0 148 4 4 1094 791 349 106 61 chr17 66807953 66808642 -28464009 - MER45B DNA Tip100 -251 789 70 4 1094 959 161 199 6 chr17 66808762 66808943 -28463708 + B3 SINE B2 1 216 0 4 1094 1588 37 16 0 chr17 66809157 66809344 -28463307 - B2_Mm2 SINE B2 -5 190 1 4 1094 584 234 96 30 chr17 66809344 66809440 -28463211 - RMER19B LTR ERVK -17 885 779 4 1094 1112 69 0 14 chr17 66809440 66809587 -28463064 + B2_Mm2 SINE B2 1 145 -50 4 1094 350 135 0 39 chr17 66809597 66809629 -28463022 + T-rich Low_complexity Low_complexity 43 74 0 4 1094 1268 34 0 7 chr17 66809629 66809777 -28462874 - B1_Mm SINE Alu 0 147 1 4 1094 350 135 0 39 chr17 66809777 66809821 -28462830 + T-rich Low_complexity Low_complexity 1 42 0 4 1094 1274 34 0 0 chr17 66809837 66809984 -28462667 + B1_Mus2 SINE Alu 1 147 0 5 1094 224 59 29 0 chr17 66809985 66810019 -28462632 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 5 1094 1382 200 52 25 chr17 66810039 66810418 -28462233 - RMER19B LTR ERVK -317 585 1 4 1094 432 305 0 99 chr17 66810517 66810659 -28461992 + RSINE1 SINE B4 2 129 -36 5 1094 207 0 0 0 chr17 66810697 66810720 -28461931 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1094 282 286 14 54 chr17 66812040 66812114 -28460537 - ID2 SINE ID -5 78 8 5 1094 878 220 76 100 chr17 66812230 66812705 -28459946 - RMER2 LTR ERV1 -4 563 1 5 1094 1028 51 0 93 chr17 66812705 66812819 -28459832 + B1_Mus1 SINE Alu 21 126 -22 5 1094 1224 93 6 11 chr17 66812819 66812836 -28459815 - B2_Mm1a SINE B2 -19 174 159 5 1094 543 31 0 0 chr17 66812836 66812901 -28459750 + (TCTA)n Simple_repeat Simple_repeat 1 65 0 5 1094 1224 93 6 11 chr17 66812901 66813057 -28459594 - B2_Mm1a SINE B2 -35 158 2 5 1094 1028 51 0 93 chr17 66813057 66813083 -28459568 + B1_Mus1 SINE Alu 127 147 -1 5 1094 1465 209 57 112 chr17 66813623 66814059 -28458592 + MTD LTR MaLR 8 419 0 5 1094 197 33 0 32 chr17 66814376 66814407 -28458244 + (CAAAAA)n Simple_repeat Simple_repeat 3 32 0 5 1094 491 244 59 0 chr17 66814554 66814673 -28457978 + B1_Mur1 SINE Alu 3 128 -21 5 1094 225 0 0 0 chr17 66814673 66814698 -28457953 + (GA)n Simple_repeat Simple_repeat 1 25 0 5 1094 1540 12 0 23 chr17 66814698 66815050 -28457601 + (GAA)n Simple_repeat Simple_repeat 1 344 0 5 1094 357 125 0 0 chr17 66815053 66815109 -28457542 + (GGA)n Simple_repeat Simple_repeat 3 58 0 5 1094 373 268 7 128 chr17 66815717 66815736 -28456915 + MT2B LTR ERVL 153 239 -362 5 1094 761 153 56 42 chr17 66815736 66815816 -28456835 + B1F2 SINE Alu 5 84 -65 5 1094 2950 71 30 30 chr17 66815816 66816223 -28456428 - MTB_Mm LTR MaLR 0 407 1 5 1094 373 268 7 128 chr17 66816223 66816264 -28456387 + MT2B LTR ERVL 240 276 -325 5 1094 761 153 56 42 chr17 66816264 66816285 -28456366 + B1F2 SINE Alu 85 149 0 5 1094 342 241 68 11 chr17 66816435 66816523 -28456128 + B4A SINE B4 3 95 -197 5 1094 1251 95 9 120 chr17 66816523 66816563 -28456088 + B2_Mm1t SINE B2 2 35 -158 5 1094 1544 52 0 40 chr17 66816563 66816763 -28455888 + B2_Mm1t SINE B2 2 193 0 5 1094 1251 95 9 120 chr17 66816763 66816938 -28455713 + B2_Mm1t SINE B2 36 193 0 5 1094 650 231 40 23 chr17 66816960 66817137 -28455514 + Lx8 LINE L1 6351 6530 -943 5 1094 254 0 0 0 chr17 66817137 66817168 -28455483 - MERVL-int LTR ERVL -7 5478 5448 5 1094 399 167 46 35 chr17 66817168 66817255 -28455396 - ORR1A3-int LTR MaLR -1323 640 553 5 1094 5008 33 2 5 chr17 66817255 66817866 -28454785 - MERVL-int LTR ERVL -125 5360 4752 5 1094 432 273 159 0 chr17 66817926 66818145 -28454506 + Lx8 LINE L1 6628 6881 -592 5 1094 291 207 0 0 chr17 66818193 66818251 -28454400 + Lx8 LINE L1 6894 6951 -522 5 1094 252 0 0 0 chr17 66818251 66818279 -28454372 + (TC)n Simple_repeat Simple_repeat 1 28 0 5 1094 351 0 0 0 chr17 66818279 66818318 -28454333 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1094 366 105 35 11 chr17 66818315 66818402 -28454249 + (CAGAGA)n Simple_repeat Simple_repeat 6 94 0 5 1094 264 268 35 35 chr17 66818445 66818530 -28454121 + MIRb SINE MIR 37 121 -147 5 1094 236 330 25 33 chr17 66818555 66818677 -28453974 + RLTR25A LTR ERVK 452 572 -531 5 1094 729 107 0 0 chr17 66818623 66818726 -28453925 + B1_Mus2 SINE Alu 45 147 0 5 1094 23 0 0 0 chr17 66818726 66818749 -28453902 + AT_rich Low_complexity Low_complexity 1 23 0 5 1094 577 181 42 17 chr17 66818787 66818905 -28453746 + B1_Mur1 SINE Alu 28 148 -1 5 1094 228 67 0 0 chr17 66819866 66819896 -28452755 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 1094 1226 56 0 0 chr17 66819896 66820040 -28452611 - B1_Mus2 SINE Alu -3 144 1 5 1094 2219 117 55 34 chr17 66820824 66821206 -28451445 + RMER10B LTR ERVL 9 398 0 5 1094 294 372 40 40 chr17 66822062 66822188 -28450463 + ID_B1 SINE B4 61 186 -38 5 1094 697 196 6 83 chr17 66822396 66822552 -28450099 + RLTR23 LTR ERV1 1 144 -286 5 1094 2132 156 24 31 chr17 66822659 66823042 -28449609 + RMER10B LTR ERVL 19 398 0 5 1094 496 254 185 0 chr17 66823111 66823241 -28449410 - MER31A LTR ERV1 0 485 332 5 1094 574 126 60 6 chr17 66823261 66823429 -28449222 + (TG)n Simple_repeat Simple_repeat 2 178 0 5 1094 295 182 26 0 chr17 66823470 66823547 -28449104 + (TG)n Simple_repeat Simple_repeat 2 80 0 5 1094 1377 199 123 36 chr17 66823613 66823947 -28448704 + ORR1D1 LTR MaLR 8 370 -4 5 1094 449 200 15 81 chr17 66823997 66824140 -28448511 + ORR1D1 LTR MaLR 21 165 -219 5 1094 2021 144 81 20 chr17 66824240 66824588 -28448063 - MTB_Mm LTR MaLR -8 399 31 5 1094 817 226 173 4 chr17 66824806 66825037 -28447614 - MER31A LTR ERV1 -215 270 1 5 1094 1161 69 7 0 chr17 66825237 66825382 -28447269 + B1_Mm SINE Alu 2 147 0 5 1094 1433 68 6 0 chr17 66826162 66826339 -28446312 - B2_Mm1t SINE B2 -14 179 2 5 1094 896 187 58 16 chr17 66826519 66826709 -28445942 - B3 SINE B2 -17 199 2 5 1094 384 266 0 11 chr17 66826723 66826818 -28445833 - ID_B1 SINE B4 -1 223 130 5 1094 255 252 0 3 chr17 66826858 66826920 -28445731 - MTD LTR MaLR 0 419 314 5 1094 428 192 177 77 chr17 66826920 66826962 -28445689 + B1_Mus1 SINE Alu 1 46 -102 5 1094 366 114 0 0 chr17 66826962 66827032 -28445619 + (TCTG)n Simple_repeat Simple_repeat 1 70 0 5 1094 428 192 177 77 chr17 66827032 66827119 -28445532 + B1_Mus1 SINE Alu 47 142 -6 5 1094 1259 34 0 7 chr17 66827130 66827278 -28445373 + B1_Mm SINE Alu 1 147 0 5 1094 465 328 16 94 chr17 66827874 66828066 -28444585 + B3A SINE B2 20 196 -2 5 1094 687 222 62 34 chr17 66828192 66828369 -28444282 - B3A SINE B2 -16 182 1 5 1094 255 239 0 162 chr17 66829043 66829148 -28443503 + ID_B1 SINE B4 80 167 -57 5 1094 323 221 0 168 chr17 66830459 66830498 -28442153 + B1_Mus2 SINE Alu 43 73 -74 5 1094 1816 155 31 62 chr17 66830498 66830918 -28441733 - RMER17C LTR ERVK -3 407 1 5 1094 323 221 0 168 chr17 66830918 66830942 -28441709 + B1_Mus2 SINE Alu 74 86 -61 5 1094 1277 27 0 13 chr17 66830942 66831091 -28441560 - B1_Mus1 SINE Alu -1 147 1 5 1094 323 221 0 168 chr17 66831091 66831151 -28441500 + B1_Mus2 SINE Alu 87 146 -1 5 1094 216 0 0 0 chr17 66831307 66831331 -28441320 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1094 1291 34 0 0 chr17 66831331 66831478 -28441173 - B1_Mus2 SINE Alu 0 147 1 5 1094 933 109 167 0 chr17 66831478 66831633 -28441018 - B2_Mm2 SINE B2 -12 183 2 5 1094 305 267 13 0 chr17 66832143 66832218 -28440433 + ID4_ SINE ID 5 80 -3 5 1094 632 277 7 26 chr17 66832336 66832488 -28440163 - RSINE1 SINE B4 -2 163 15 5 1094 339 25 0 0 chr17 66832573 66832613 -28440038 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 5 1094 1432 162 77 38 chr17 66832716 66832886 -28439765 - RMER17C LTR ERVK -21 389 223 5 1094 261 0 0 0 chr17 66832886 66832915 -28439736 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1094 1432 162 77 38 chr17 66832915 66833109 -28439542 - RMER17C LTR ERVK -188 222 11 5 1094 482 264 97 52 chr17 66833266 66833514 -28439137 - RLTR9A LTR ERVK 0 368 110 5 1094 2284 88 132 11 chr17 66834406 66834762 -28437889 + RLTR23 LTR ERV1 30 428 -2 5 1094 186 150 0 0 chr17 66836408 66836448 -28436203 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 5 1094 1026 74 0 7 chr17 66836450 66836586 -28436065 - B1_Mm SINE Alu 0 147 13 5 1094 841 50 215 0 chr17 66836936 66837057 -28435594 - B1_Mus2 SINE Alu 0 147 1 5 1094 317 300 106 40 chr17 66837836 66838110 -28434541 + B4A SINE B4 1 292 0 5 1094 291 302 22 26 chr17 66838597 66838714 -28433937 + PB1D10 SINE Alu 1 116 -1 5 1094 1406 86 5 5 chr17 66838813 66839001 -28433650 + B2_Mm2 SINE B2 2 189 -6 5 1094 983 136 0 7 chr17 66839087 66839235 -28433416 - B1_Mus1 SINE Alu -1 147 1 5 1094 303 280 77 39 chr17 66839779 66839909 -28432742 - L4 LINE RTE -655 1374 1240 5 1094 647 25 12 0 chr17 66840072 66840153 -28432498 + (TTTC)n Simple_repeat Simple_repeat 2 83 0 5 1094 1036 54 0 0 chr17 66840153 66840282 -28432369 - B1_Mm SINE Alu -12 135 7 5 1094 243 250 33 16 chr17 66840181 66840303 -28432348 - ORR1B1-int LTR MaLR -755 754 631 5 1094 1297 83 39 0 chr17 66840318 66840498 -28432153 - B2_Mm1t SINE B2 -6 187 1 5 1094 1481 49 5 21 chr17 66840574 66840763 -28431888 - B2_Mm2 SINE B2 -8 187 2 5 1094 1279 27 0 0 chr17 66840792 66840938 -28431713 - B1_Mus2 SINE Alu -1 146 1 5 1094 806 174 15 8 chr17 66841017 66841150 -28431501 - B1_Mus1 SINE Alu -11 137 4 5 1094 182 62 31 0 chr17 66841222 66841254 -28431397 + (TTA)n Simple_repeat Simple_repeat 1 33 0 5 1094 717 33 33 0 chr17 66841346 66841436 -28431215 - B2_Mm2 SINE B2 -101 94 2 5 1094 226 0 0 56 chr17 66841450 66841486 -28431165 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1094 733 192 101 39 chr17 66841542 66841721 -28430930 + B3 SINE B2 2 191 -25 5 1094 486 299 57 42 chr17 66841756 66841937 -28430714 - B3A SINE B2 -12 204 27 5 1094 1368 67 0 0 chr17 66841939 66842119 -28430532 + (TTC)n Simple_repeat Simple_repeat 1 180 0 5 1094 960 163 0 0 chr17 66842120 66842292 -28430359 + CT-rich Low_complexity Low_complexity 2 173 0 5 1094 1165 68 0 13 chr17 66842292 66842441 -28430210 - B1_Mus2 SINE Alu 0 147 1 5 1094 308 194 130 0 chr17 66843227 66843319 -28429332 - L1MB3 LINE L1 -228 5955 5853 5 1094 245 247 82 0 chr17 66843436 66843509 -28429142 - B1F2 SINE Alu -33 116 38 5 1094 312 304 84 50 chr17 66843536 66843738 -28428913 - L1MB3 LINE L1 -410 5773 5566 5 1094 357 281 0 0 chr17 66844297 66844379 -28428272 - ID4_ SINE ID 0 83 2 5 1094 943 207 83 0 chr17 66845214 66845407 -28427244 - B3 SINE B2 -5 211 3 5 1094 1146 41 0 58 chr17 66845643 66845798 -28426853 + B1_Mus2 SINE Alu 2 147 0 5 1094 314 170 0 0 chr17 66846425 66846478 -28426173 - ID4 SINE ID -22 61 9 5 1094 252 220 102 0 chr17 66846429 66846488 -28426163 - ZP3AR Satellite Satellite -109 103 39 5 1094 276 130 0 0 chr17 66846621 66846667 -28425984 + (CCCA)n Simple_repeat Simple_repeat 3 48 0 5 1095 271 182 0 35 chr17 66848126 66848183 -28424468 + B1_Mus1 SINE Alu 6 60 -88 5 1095 258 184 0 0 chr17 66848187 66848263 -28424388 + G-rich Low_complexity Low_complexity 6 81 0 5 1095 261 203 16 78 chr17 66848318 66848382 -28424269 - RSINE1 SINE B4 -2 163 104 6 1095 334 147 67 0 chr17 66848643 66848718 -28423933 + LTR31 LTR ERV1 407 486 -133 6 1095 668 229 0 14 chr17 66848798 66848940 -28423711 - B1_Mur3 SINE Alu -8 141 2 6 1095 1125 211 5 9 chr17 66850426 66850641 -28422010 - B3 SINE B2 -2 214 1 6 1095 302 271 161 8 chr17 66850874 66851004 -28421647 - B3 SINE B2 -29 187 38 6 1095 427 211 219 0 chr17 66851008 66851109 -28421542 + B1_Mus2 SINE Alu 1 139 -10 6 1095 215 204 0 69 chr17 66851109 66851122 -28421529 - B3A SINE B2 -143 55 44 6 1095 333 0 0 0 chr17 66851122 66851159 -28421492 + (CAA)n Simple_repeat Simple_repeat 2 38 0 6 1095 215 204 0 69 chr17 66851159 66851203 -28421448 - B3A SINE B2 -155 43 2 6 1095 533 301 11 75 chr17 66851488 66851675 -28420976 + B3A SINE B2 8 182 -16 6 1095 411 171 0 0 chr17 66851676 66851752 -28420899 + (CATA)n Simple_repeat Simple_repeat 4 79 0 6 1095 1596 36 0 25 chr17 66852009 66852206 -28420445 - B2_Mm1t SINE B2 0 193 2 6 1095 363 332 69 65 chr17 66852935 66853212 -28419439 + MTEa LTR MaLR 72 349 -30 6 1095 23 0 0 0 chr17 66853550 66853573 -28419078 + AT_rich Low_complexity Low_complexity 1 23 0 6 1095 618 241 60 36 chr17 66853590 66853758 -28418893 - B3A SINE B2 -26 172 1 6 1095 1129 201 5 0 chr17 66853931 66854130 -28418521 - B3 SINE B2 -9 207 8 6 1095 331 197 0 15 chr17 66855034 66855101 -28417550 - ID4 SINE ID -7 76 11 6 1095 249 284 87 10 chr17 66856093 66856196 -28416455 + PB1D10 SINE Alu 1 111 -6 6 1095 21 36 0 0 chr17 66856225 66856253 -28416398 + AT_rich Low_complexity Low_complexity 1 28 0 6 1095 516 186 146 8 chr17 66856809 66856939 -28415712 - B1_Mur3 SINE Alu 0 149 2 6 1095 1167 90 42 6 chr17 66857190 66857358 -28415293 - B2_Mm2 SINE B2 -19 176 3 6 1095 22 35 0 0 chr17 66857360 66857389 -28415262 + AT_rich Low_complexity Low_complexity 1 29 0 6 1095 1182 76 105 0 chr17 66857466 66857637 -28415014 + B2_Mm2 SINE B2 1 189 -6 6 1095 751 228 47 47 chr17 66858329 66858522 -28414129 + B3 SINE B2 21 213 -3 6 1095 237 98 0 0 chr17 66858524 66858565 -28414086 + (A)n Simple_repeat Simple_repeat 1 41 0 6 1095 186 227 0 0 chr17 66858612 66858656 -28413995 + (TGAA)n Simple_repeat Simple_repeat 3 46 0 6 1095 558 200 0 0 chr17 66858690 66858785 -28413866 + B1_Mur4 SINE Alu 56 150 0 6 1095 1312 65 6 0 chr17 66859199 66859368 -28413283 - B2_Mm1t SINE B2 -22 171 2 6 1095 279 0 0 0 chr17 66859876 66859907 -28412744 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 1095 868 249 15 15 chr17 66861297 66861501 -28411150 + B3 SINE B2 2 205 -11 6 1095 396 0 0 0 chr17 66862310 66862354 -28410297 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 6 1095 742 179 7 29 chr17 66862357 66862495 -28410156 - B1_Mur3 SINE Alu -13 136 2 6 1095 29 0 0 0 chr17 66862670 66862699 -28409952 + AT_rich Low_complexity Low_complexity 1 29 0 6 1095 304 278 25 34 chr17 66864401 66864520 -28408131 + Charlie18a DNA MER1_type 216 333 -9 6 1095 787 211 7 0 chr17 66864672 66864814 -28407837 - B3A SINE B2 -55 143 1 6 1095 576 180 323 18 chr17 66864882 66865046 -28407605 - B3 SINE B2 -1 215 2 6 1095 1444 81 16 0 chr17 66865056 66865242 -28407409 - B2_Mm2 SINE B2 -6 189 1 6 1095 1445 108 13 39 chr17 66865453 66865683 -28406968 + URR1A DNA MER1_type 1 224 -2 6 1095 731 145 29 37 chr17 66867647 66867783 -28404868 - B1_Mm SINE Alu 0 147 13 6 1095 27 29 0 0 chr17 66868930 66868964 -28403687 + GC_rich Low_complexity Low_complexity 1 34 0 6 1095 192 77 0 0 chr17 66868981 66869007 -28403644 + (CCG)n Simple_repeat Simple_repeat 1 26 0 6 1095 855 269 100 40 chr17 66870743 66871233 -28401418 - L1MA6 LINE L1 -2 6295 5800 6 1095 388 350 95 58 chr17 66871297 66871408 -28401243 + ORR1E LTR MaLR 1 113 -246 6 1095 577 231 17 0 chr17 66871408 66871525 -28401126 + PB1D9 SINE Alu 2 120 0 6 1095 388 350 95 58 chr17 66871525 66871759 -28400892 + ORR1E LTR MaLR 114 359 0 6 1095 843 300 67 54 chr17 66871811 66871853 -28400798 - Tigger6a DNA MER2_type -355 728 692 6 1095 2927 76 33 12 chr17 66871853 66872252 -28400399 - MTB_Mm LTR MaLR 0 407 1 6 1095 843 300 67 54 chr17 66872252 66872597 -28400054 - Tigger6a DNA MER2_type -392 691 336 6 1095 368 279 262 44 chr17 66872596 66872844 -28399807 + LTR52 LTR ERVL 11 312 -109 6 1095 344 269 124 54 chr17 66872958 66873143 -28399508 - Tigger6a DNA MER2_type -872 211 14 6 1095 422 327 39 70 chr17 66873399 66873629 -28399022 + MLT1L LTR MaLR 10 232 -378 6 1095 26 50 0 0 chr17 66873863 66873903 -28398748 + AT_rich Low_complexity Low_complexity 1 40 0 6 1095 327 142 63 34 chr17 66873903 66874078 -28398573 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 1095 362 217 35 53 chr17 66874078 66874248 -28398403 + (GTGTG)n Simple_repeat Simple_repeat 4 170 0 6 1095 395 247 17 6 chr17 66874249 66874424 -28398227 + (TG)n Simple_repeat Simple_repeat 2 178 0 6 1095 867 94 141 0 chr17 66874759 66874887 -28397764 - B1_Mus1 SINE Alu 0 148 3 6 1095 417 137 0 0 chr17 66874939 66875001 -28397650 + (TTCC)n Simple_repeat Simple_repeat 4 65 0 6 1095 1159 61 0 20 chr17 66875001 66875151 -28397500 - B1_Mm SINE Alu 0 147 1 6 1095 417 137 0 0 chr17 66875151 66875161 -28397490 + (TTCC)n Simple_repeat Simple_repeat 2 11 0 6 1095 673 266 0 0 chr17 66875161 66875304 -28397347 - B1_Mur2 SINE Alu -6 143 1 6 1095 506 253 89 25 chr17 66875317 66875475 -28397176 - MER2 DNA MER2_type -173 172 5 6 1095 3240 36 8 0 chr17 66875481 66875865 -28396786 + L1Md_F2 LINE L1 6196 6582 0 6 1095 668 283 12 0 chr17 66876267 66876433 -28396218 - B3 SINE B2 -11 205 38 6 1095 2200 129 15 3 chr17 66876433 66876766 -28395885 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 1095 6700 61 12 16 chr17 66876768 66877622 -28395029 - IAPEz-int LTR ERVK -2 6479 5630 6 1095 23291 65 31 14 chr17 66877608 66880625 -28392026 - IAPEz-int LTR ERVK -3405 3076 8 6 1095 2200 129 15 3 chr17 66880625 66880958 -28391693 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 1095 223 209 0 23 chr17 66880958 66881002 -28391649 - B3A SINE B2 -155 43 1 6 1095 334 295 140 34 chr17 66881454 66881633 -28391018 - LTR78 LTR ERV1 -620 684 487 6 1095 728 261 111 28 chr17 66881643 66881895 -28390756 - B4A SINE B4 -19 273 1 6 1095 1658 154 49 26 chr17 66881922 66882229 -28390422 - Lx5 LINE L1 -3 7047 6734 6 1095 1128 56 0 27 chr17 66882346 66882492 -28390159 + B1_Mus2 SINE Alu 1 142 -5 6 1095 186 160 0 0 chr17 66882492 66882542 -28390109 + A-rich Low_complexity Low_complexity 5 54 0 6 1095 387 139 29 46 chr17 66883233 66883407 -28389244 + (TCTCTG)n Simple_repeat Simple_repeat 4 174 0 6 1095 673 316 16 37 chr17 66884285 66884528 -28388123 + B4A SINE B4 55 292 0 6 1095 558 234 0 0 chr17 66884567 66884742 -28387909 + (CA)n Simple_repeat Simple_repeat 2 176 0 6 1095 581 222 0 11 chr17 66884794 66884976 -28387675 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 1095 228 368 59 42 chr17 66884977 66885096 -28387555 + LTR16E2 LTR ERVL 165 285 -283 6 1095 281 47 23 0 chr17 66885233 66885276 -28387375 + (TTTTTG)n Simple_repeat Simple_repeat 3 46 0 6 1095 1188 61 0 0 chr17 66885276 66885423 -28387228 - B1_Mus2 SINE Alu 0 147 1 6 1095 257 254 0 0 chr17 66885497 66885553 -28387098 - B4A SINE B4 -28 264 209 6 1095 490 92 7 7 chr17 66885553 66885634 -28387017 + ORR1A2 LTR MaLR 1 112 -282 6 1095 2020 120 118 29 chr17 66885684 66886180 -28386471 + RLTR25B LTR ERVK 396 1028 0 6 1095 32 26 0 0 chr17 66886278 66886317 -28386334 + AT_rich Low_complexity Low_complexity 1 39 0 6 1095 2772 236 88 24 chr17 66886387 66886855 -28385796 - RLTR40 LTR ERVK -17 800 298 6 1095 396 0 0 0 chr17 66886855 66886899 -28385752 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1095 2772 236 88 24 chr17 66886899 66887181 -28385470 - RLTR40 LTR ERVK -520 297 2 6 1095 770 345 128 21 chr17 66887251 66887906 -28384745 - Zaphod2 DNA Tip100 -357 3167 2443 6 1095 661 148 18 13 chr17 66887914 66888076 -28384575 + B1_Mm SINE Alu 5 306 -5 6 1095 370 340 60 20 chr17 66888194 66888395 -28384256 - Zaphod2 DNA Tip100 -1293 2231 2023 6 1095 956 223 86 80 chr17 66888408 66888600 -28384051 + RLTR14 LTR ERV1 1 177 -205 6 1095 1258 34 7 0 chr17 66888600 66888746 -28383905 - B1_Mus1 SINE Alu -1 147 1 6 1095 956 223 86 80 chr17 66888746 66888889 -28383762 + RLTR14 LTR ERV1 178 338 -44 6 1095 430 267 112 0 chr17 66889039 66889155 -28383496 + B1_Mus2 SINE Alu 2 130 -17 6 1095 460 145 0 0 chr17 66889169 66889238 -28383413 + B1_Mus2 SINE Alu 12 80 -67 6 1095 490 247 48 97 chr17 66889543 66889749 -28382902 - B3A SINE B2 -2 196 1 6 1095 25 0 0 0 chr17 66890281 66890306 -28382345 + AT_rich Low_complexity Low_complexity 1 25 0 6 1095 1416 83 5 15 chr17 66890393 66890589 -28382062 + B2_Mm2 SINE B2 1 194 -1 6 1095 819 212 53 69 chr17 66891079 66891290 -28381361 + B3A SINE B2 13 198 0 6 1095 355 260 0 30 chr17 66891685 66891784 -28380867 + GA-rich Low_complexity Low_complexity 2 97 0 6 1095 216 143 0 0 chr17 66891838 66891880 -28380771 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 6 1095 791 211 0 0 chr17 66891883 66892030 -28380621 - B1_Mus2 SINE Alu 0 147 1 6 1095 432 97 0 0 chr17 66892111 66892173 -28380478 + (TCCC)n Simple_repeat Simple_repeat 4 65 0 6 1095 259 342 132 35 chr17 66892398 66892551 -28380100 - Charlie25 DNA MER1_type -1574 950 774 6 1095 2456 93 3 0 chr17 66892551 66892875 -28379776 - ORR1A2 LTR MaLR 0 327 3 6 1095 259 342 132 35 chr17 66892875 66892948 -28379703 - Charlie25 DNA MER1_type -1751 773 703 6 1095 393 263 106 64 chr17 66893720 66893949 -28378702 - MTEa LTR MaLR 0 379 118 6 1095 350 269 109 36 chr17 66893954 66894147 -28378504 + Lx9 LINE L1 7317 7523 -121 6 1095 318 188 129 86 chr17 66894163 66894326 -28378325 + Lx9 LINE L1 7423 7592 -52 6 1095 343 215 0 44 chr17 66895176 66895356 -28377295 + (CACTC)n Simple_repeat Simple_repeat 5 176 0 6 1095 326 227 0 43 chr17 66895449 66895633 -28377018 + (CACTC)n Simple_repeat Simple_repeat 5 180 0 6 1095 337 227 0 43 chr17 66895680 66895864 -28376787 + (CACTC)n Simple_repeat Simple_repeat 5 180 0 6 1095 309 238 0 44 chr17 66895890 66896070 -28376581 + (CACTC)n Simple_repeat Simple_repeat 5 176 0 6 1095 368 209 0 44 chr17 66896100 66896280 -28376371 + (CACTC)n Simple_repeat Simple_repeat 5 176 0 6 1095 344 195 156 0 chr17 66896681 66896758 -28375893 - RSINE1 SINE B4 -35 130 42 6 1095 261 0 0 0 chr17 66897503 66897532 -28375119 + (CAT)n Simple_repeat Simple_repeat 1 29 0 6 1095 1255 48 0 0 chr17 66897618 66897765 -28374886 + B1_Mus2 SINE Alu 1 147 0 6 1095 1191 192 191 21 chr17 66897873 66898203 -28374448 - MTD LTR MaLR -2 417 32 7 1095 695 299 44 18 chr17 66898211 66898436 -28374215 - MER2 DNA MER2_type -1 344 114 7 1095 378 222 0 24 chr17 66898756 66898839 -28373812 - L1VL4 LINE L1 -5790 512 432 7 1095 2223 110 44 39 chr17 66898837 66899275 -28373376 + Lx2 LINE L1 6159 6991 -6 7 1095 228 86 0 0 chr17 66899277 66899312 -28373339 + (GA)n Simple_repeat Simple_repeat 2 36 0 7 1095 765 223 101 0 chr17 66899819 66899967 -28372684 + B3A SINE B2 2 164 -34 7 1095 1051 224 87 12 chr17 66900024 66900277 -28372374 + ORR1D1 LTR MaLR 1 272 -102 7 1095 363 277 7 33 chr17 66900290 66900352 -28372299 - Lx7 LINE L1 -661 7035 6975 7 1095 1224 42 0 0 chr17 66900352 66900494 -28372157 - B1_Mus1 SINE Alu -6 142 1 7 1095 363 277 7 33 chr17 66900494 66900584 -28372067 - Lx7 LINE L1 -722 6974 6889 7 1095 26 50 0 0 chr17 66900590 66900630 -28372021 + AT_rich Low_complexity Low_complexity 1 40 0 7 1095 279 0 0 0 chr17 66900707 66900738 -28371913 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1095 698 179 32 0 chr17 66900743 66900866 -28371785 - B1_Mur2 SINE Alu -11 138 12 7 1095 236 281 86 86 chr17 66900772 66900924 -28371727 - MT2B2 LTR ERVL -326 258 107 7 1095 227 171 49 0 chr17 66901717 66901758 -28370893 - URR1A DNA MER1_type -136 90 48 7 1095 832 158 198 28 chr17 66902477 66902659 -28369992 - B3 SINE B2 0 216 4 7 1095 1237 77 0 34 chr17 66903251 66903414 -28369237 + B2_Mm2 SINE B2 1 161 -34 7 1095 180 0 0 0 chr17 66903414 66903434 -28369217 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 7 1095 1237 77 0 34 chr17 66903434 66903446 -28369205 + B2_Mm2 SINE B2 162 170 -25 7 1095 202 208 41 20 chr17 66903624 66903673 -28368978 - L2a LINE L2 -4 3422 3373 7 1095 1004 64 118 31 chr17 66903873 66904034 -28368617 - B2_Mm2 SINE B2 -19 176 2 7 1095 419 301 100 157 chr17 66904042 66904412 -28368239 + ORR1E LTR MaLR 6 354 -5 7 1095 356 183 0 0 chr17 66906509 66906569 -28366082 - PB1D10 SINE Alu -41 76 17 7 1095 22 0 0 0 chr17 66906584 66906606 -28366045 + AT_rich Low_complexity Low_complexity 1 22 0 7 1095 456 234 141 70 chr17 66906607 66906763 -28365888 - B3A SINE B2 0 198 32 7 1095 24 0 0 0 chr17 66906961 66906985 -28365666 + AT_rich Low_complexity Low_complexity 1 24 0 7 1095 235 250 0 18 chr17 66907134 66907191 -28365460 + (TATG)n Simple_repeat Simple_repeat 1 56 0 7 1095 346 250 0 13 chr17 66907228 66907305 -28365346 - ID4_ SINE ID -5 78 3 7 1095 264 122 0 0 chr17 66909472 66909513 -28363138 + (T)n Simple_repeat Simple_repeat 1 41 0 7 1095 1237 41 0 0 chr17 66909513 66909660 -28362991 - B1_Mm SINE Alu 0 147 1 7 1095 195 122 20 39 chr17 66910096 66910147 -28362504 + (CTTAA)n Simple_repeat Simple_repeat 2 51 0 7 1095 266 262 0 0 chr17 66910375 66910436 -28362215 - B1_Mur3 SINE Alu -88 61 1 7 1095 304 196 197 82 chr17 66910802 66910924 -28361727 + MLT1K LTR MaLR 160 295 -300 7 1095 1036 255 80 29 chr17 66911087 66911398 -28361253 - MLT1A0 LTR MaLR -36 329 3 7 1095 414 0 0 0 chr17 66911794 66911840 -28360811 + (TATG)n Simple_repeat Simple_repeat 2 47 0 7 1095 630 165 11 26 chr17 66911840 66911963 -28360688 - B1_Mur2 SINE Alu -8 141 16 7 1095 312 311 49 25 chr17 66912068 66912171 -28360480 + L1M4 LINE L1 5102 5204 -942 7 1095 509 189 122 50 chr17 66912171 66912310 -28360341 + B1_Mur2 SINE Alu 1 149 0 7 1095 312 311 49 25 chr17 66912310 66912328 -28360323 + L1M4 LINE L1 5205 5224 -922 7 1095 405 282 149 14 chr17 66912321 66912610 -28360041 + L1M2 LINE L1 5148 5481 -761 7 1095 1204 87 127 0 chr17 66912610 66912783 -28359868 + B2_Mm2 SINE B2 1 195 0 7 1095 375 288 118 33 chr17 66912783 66912797 -28359854 + L1M2 LINE L1 5482 5494 -748 7 1095 215 218 18 0 chr17 66912797 66912852 -28359799 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 1095 312 118 0 19 chr17 66912864 66912916 -28359735 + HAL1-3A_ME LINE L1 1976 2026 -832 7 1095 377 278 83 63 chr17 66912916 66913249 -28359402 + L1M3 LINE L1 5482 5827 -356 7 1095 2529 124 18 5 chr17 66914215 66914604 -28358047 - ORR1B1 LTR MaLR 0 394 1 7 1095 2229 100 29 0 chr17 66915120 66915430 -28357221 - ORR1A2 LTR MaLR -8 319 1 7 1095 252 341 94 16 chr17 66916250 66916378 -28356273 - MER2 DNA MER2_type -207 138 1 7 1095 215 403 48 0 chr17 66916671 66916795 -28355856 - L2b LINE L2 -6 3369 3240 7 1095 4444 186 58 15 chr17 66916823 66917646 -28355005 + RMER13A LTR ERVK 2 860 0 7 1095 2516 92 224 7 chr17 66917974 66918411 -28354240 + RLTR47_MM LTR ERV1 1 532 0 7 1095 901 134 28 0 chr17 66918429 66918571 -28354080 - ORR1C1 LTR MaLR -232 146 1 7 1095 26 74 0 0 chr17 66918571 66918625 -28354026 + AT_rich Low_complexity Low_complexity 1 54 0 7 1095 708 183 83 0 chr17 66918625 66918745 -28353906 - B1_Mur1 SINE Alu -10 139 10 7 1095 693 146 67 30 chr17 66918773 66918907 -28353744 + RSINE1 SINE B4 3 141 -24 7 1095 972 111 0 0 chr17 66918908 66919061 -28353590 + (CA)n Simple_repeat Simple_repeat 2 154 0 7 1095 316 217 10 39 chr17 66919273 66919384 -28353267 - Lx7 LINE L1 0 7696 7602 7 1095 318 26 0 0 chr17 66919748 66919787 -28352864 + (CAA)n Simple_repeat Simple_repeat 2 40 0 7 1095 561 125 0 0 chr17 66921009 66921097 -28351554 + (TTCC)n Simple_repeat Simple_repeat 1 88 0 7 1095 1221 90 8 0 chr17 66921097 66921284 -28351367 - B2_Mm2 SINE B2 -2 191 1 7 1095 441 265 25 33 chr17 66922007 66922128 -28350523 - PB1D9 SINE Alu 0 120 1 7 1095 420 200 0 0 chr17 66922466 66922571 -28350080 + (TG)n Simple_repeat Simple_repeat 1 105 0 7 1095 230 233 117 62 chr17 66922660 66922788 -28349863 + HAL1 LINE L1 1633 1767 -740 7 1095 330 332 114 48 chr17 66922831 66922973 -28349678 + HAL1 LINE L1 1911 2063 -444 7 1095 707 167 44 22 chr17 66922973 66923108 -28349543 + B1F SINE Alu 3 140 -9 7 1095 330 332 114 48 chr17 66923108 66923193 -28349458 + HAL1 LINE L1 2064 2153 -354 7 1095 919 257 117 18 chr17 66923330 66923603 -28349048 + MER2 DNA MER2_type 42 341 -4 7 1095 239 135 0 0 chr17 66923688 66923725 -28348926 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 1095 780 132 37 22 chr17 66923725 66924000 -28348651 + (TATG)n Simple_repeat Simple_repeat 1 279 0 7 1095 783 206 0 0 chr17 66924001 66924181 -28348470 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1095 269 266 0 15 chr17 66924220 66924285 -28348366 + GA-rich Low_complexity Low_complexity 1 64 0 7 1095 740 245 52 0 chr17 66924387 66924579 -28348072 - B3 SINE B2 -14 202 1 7 1095 304 289 0 0 chr17 66925910 66925993 -28346658 - Tigger7 DNA MER2_type -155 2336 2254 7 1095 427 277 124 0 chr17 66925998 66926135 -28346516 - Tigger7 DNA MER2_type -2088 403 250 7 1095 295 222 31 8 chr17 66926167 66926354 -28346297 + (TTTA)n Simple_repeat Simple_repeat 1 191 0 7 1095 1713 169 176 8 chr17 66927998 66928357 -28344294 + MTD LTR MaLR 1 419 0 7 1095 309 135 19 19 chr17 66929073 66929126 -28343525 - MTD LTR MaLR 0 419 367 7 1095 869 257 105 35 chr17 66929654 66929941 -28342710 + MTE2b LTR MaLR 1 377 -2 7 1095 205 345 0 0 chr17 66930368 66930423 -28342228 - MER5A DNA MER1_type -3 186 132 7 1095 314 331 74 20 chr17 66930547 66930695 -28341956 + MER5B DNA MER1_type 9 164 -14 7 1095 497 263 295 57 chr17 66932522 66932941 -28339710 - L1MA8 LINE L1 -78 6213 5695 7 1095 732 331 32 53 chr17 66934104 66934484 -28338167 - MTE2b LTR MaLR -4 375 4 7 1095 1087 245 11 39 chr17 66934728 66935012 -28337639 - Lx5 LINE L1 -15 7035 6760 7 1095 299 258 0 0 chr17 66937873 66937935 -28334716 + PB1D10 SINE Alu 36 97 -20 7 1095 414 0 0 0 chr17 66937941 66937987 -28334664 + (CAA)n Simple_repeat Simple_repeat 3 48 0 7 1095 505 278 16 87 chr17 66938010 66938195 -28334456 + MER2 DNA MER2_type 149 320 -25 7 1095 768 265 29 8 chr17 66938287 66938499 -28334152 - B3A SINE B2 -1 215 8 7 1095 223 346 0 25 chr17 66938428 66938508 -28334143 - RSINE1 SINE B4 -86 79 2 7 1095 2279 172 42 63 chr17 66940586 66940658 -28331993 - RLTR16 LTR ERVK -12 493 415 7 1095 495 0 0 0 chr17 66940658 66940713 -28331938 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 1095 2279 172 42 63 chr17 66940713 66941144 -28331507 - RLTR16 LTR ERVK -91 414 2 7 1095 983 177 80 10 chr17 66941188 66941388 -28331263 - B3 SINE B2 0 216 3 7 1095 1647 31 0 20 chr17 66941846 66942042 -28330609 + B2_Mm1a SINE B2 1 192 -1 7 1095 447 106 0 0 chr17 66943278 66943344 -28329307 + (TAAA)n Simple_repeat Simple_repeat 2 67 0 7 1095 306 312 128 0 chr17 66944177 66944302 -28328349 - MER5A1 DNA MER1_type -25 141 1 7 1095 1608 144 11 146 chr17 66944311 66944783 -28327868 - RMER17C LTR ERVK 0 410 3 7 1095 2547 181 116 57 chr17 66944818 66944866 -28327785 - RLTR40 LTR ERVK -20 797 750 7 1095 552 15 0 0 chr17 66944866 66944931 -28327720 + (CAAAG)n Simple_repeat Simple_repeat 3 67 0 7 1095 2547 181 116 57 chr17 66944931 66944992 -28327659 - RLTR40 LTR ERVK -68 749 648 7 1095 321 89 0 0 chr17 66944992 66945037 -28327614 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 7 1095 2547 181 116 57 chr17 66945037 66945643 -28327008 - RLTR40 LTR ERVK -170 647 42 7 1095 183 250 194 11 chr17 66945648 66945741 -28326910 + MER5A DNA MER1_type 15 124 -65 7 1095 284 279 98 9 chr17 66945741 66945853 -28326798 + MER5A1 DNA MER1_type 14 135 -31 7 1095 363 316 136 82 chr17 66946362 66946604 -28326047 + RMER10A LTR ERVL 18 266 -176 7 1095 558 0 0 0 chr17 66946604 66946666 -28325985 + (TC)n Simple_repeat Simple_repeat 1 62 0 7 1095 363 316 136 82 chr17 66946666 66946799 -28325852 + RMER10A LTR ERVL 267 413 -29 7 1095 286 319 51 67 chr17 66946963 66947141 -28325510 - L1M5 LINE L1 -437 5687 5513 7 1095 417 20 0 0 chr17 66947554 66947604 -28325047 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 1095 1334 101 21 0 chr17 66947740 66947928 -28324723 - B2_Mm1t SINE B2 -1 192 1 7 1095 638 254 39 95 chr17 66948513 66948694 -28323957 - ID_B1 SINE B4 -5 219 45 7 1095 1113 59 0 0 chr17 66948694 66948830 -28323821 + B1_Mus1 SINE Alu 1 136 -12 7 1095 414 0 0 0 chr17 66948830 66948876 -28323775 + (TAA)n Simple_repeat Simple_repeat 2 47 0 8 1095 638 254 39 95 chr17 66948876 66948924 -28323727 - ID SINE ID -180 44 3 7 1095 8286 20 2 5 chr17 66948990 66949952 -28322699 - L1Md_F3 LINE L1 -11 6573 5647 8 1095 352 209 120 11 chr17 66949992 66950084 -28322567 - MLT1A1 LTR MaLR -5 403 302 8 1095 586 93 0 0 chr17 66952306 66952392 -28320259 + B2_Mm2 SINE B2 76 161 -34 8 1095 189 0 0 0 chr17 66952392 66952413 -28320238 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 8 1095 316 207 10 139 chr17 66952825 66952926 -28319725 + Lx7 LINE L1 6308 6395 -1301 8 1095 656 107 19 0 chr17 66952926 66953029 -28319622 - RMER21B LTR ERV1 -435 407 303 8 1095 450 0 0 0 chr17 66953029 66953079 -28319572 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 8 1095 324 48 0 0 chr17 66953082 66953124 -28319527 + (TATG)n Simple_repeat Simple_repeat 4 45 0 8 1095 525 144 157 57 chr17 66953132 66953272 -28319379 - RMER21B LTR ERV1 -688 154 1 8 1095 4241 187 47 9 chr17 66953272 66954066 -28318585 + Lx7 LINE L1 6500 7323 -373 8 1095 180 0 0 0 chr17 66954068 66954088 -28318563 + (TG)n Simple_repeat Simple_repeat 1 20 0 8 1095 779 181 155 14 chr17 66954092 66954299 -28318352 + Lx7 LINE L1 7461 7696 0 8 1095 183 42 0 0 chr17 66954330 66954354 -28318297 + (CAA)n Simple_repeat Simple_repeat 2 25 0 8 1095 799 228 27 5 chr17 66954374 66954559 -28318092 + B3 SINE B2 28 216 0 8 1095 631 301 39 21 chr17 66954584 66954818 -28317833 + MER2 DNA MER2_type 87 324 -21 8 1095 375 60 0 0 chr17 66954866 66954916 -28317735 + (TG)n Simple_repeat Simple_repeat 1 50 0 8 1095 387 219 85 0 chr17 66956929 66957011 -28315640 + PB1D10 SINE Alu 20 108 -41 8 1095 334 215 128 11 chr17 66957143 66957237 -28315414 + PB1 SINE Alu 21 125 -2 8 1095 212 278 139 0 chr17 66957245 66957317 -28315334 + ID4 SINE ID 2 83 0 8 1095 1687 31 0 0 chr17 66957600 66957791 -28314860 - B2_Mm1a SINE B2 -1 192 2 8 1095 857 137 0 0 chr17 66957820 66957951 -28314700 - B1_Mur3 SINE Alu -9 140 10 8 1095 1507 146 236 18 chr17 66958059 66958393 -28314258 + MTB_Mm LTR MaLR 1 407 0 8 1095 207 0 0 0 chr17 66958560 66958583 -28314068 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 8 1095 773 186 134 32 chr17 66958872 66959089 -28313562 - RMER5 LTR ERV1 0 534 296 8 1095 720 147 20 0 chr17 66959789 66959939 -28312712 + (TA)n Simple_repeat Simple_repeat 2 154 0 8 1095 1288 27 0 0 chr17 66961246 66961393 -28311258 + B1_Mm SINE Alu 1 147 0 8 1095 2896 61 137 137 chr17 66961411 66961922 -28310729 - RLTR1B LTR ERV1 0 512 2 8 1095 249 57 0 0 chr17 66961922 66961957 -28310694 + (CAA)n Simple_repeat Simple_repeat 3 37 0 8 1095 2451 95 0 58 chr17 66962017 66962364 -28310287 + ORR1A2 LTR MaLR 1 327 0 8 1095 450 308 81 40 chr17 66962853 66963151 -28309500 + ORR1E LTR MaLR 38 347 -12 8 1095 905 288 17 27 chr17 66963264 66963557 -28309094 + B4A SINE B4 1 290 -2 8 1095 454 278 123 56 chr17 66963602 66963853 -28308798 - LTR41 LTR ERVL -70 698 431 8 1095 231 36 0 0 chr17 66964112 66964140 -28308511 + (CA)n Simple_repeat Simple_repeat 1 28 0 8 1095 868 150 0 16 chr17 66964165 66964607 -28308044 + (CA)n Simple_repeat Simple_repeat 1 434 0 8 1095 531 161 0 0 chr17 66964635 66964753 -28307898 + (CA)n Simple_repeat Simple_repeat 1 118 0 8 1095 711 246 13 15 chr17 66965338 66965530 -28307121 - Lx7 LINE L1 -479 5812 5588 8 1095 786 170 14 0 chr17 66965767 66965902 -28306749 - B1_Mur4 SINE Alu -1 149 13 8 1095 5120 84 39 13 chr17 66965902 66966689 -28305962 - RLTR13C2 LTR ERVK 0 808 1 8 1095 1221 159 37 0 chr17 66967456 66967670 -28304981 - URR1B DNA MER1_type -1 224 3 8 1095 729 300 78 20 chr17 66968447 66968702 -28303949 + B4A SINE B4 2 271 -21 8 1095 785 261 0 21 chr17 66969808 66969996 -28302655 + B3 SINE B2 1 184 -32 8 1095 396 0 0 0 chr17 66969997 66970041 -28302610 + (TAA)n Simple_repeat Simple_repeat 2 45 0 8 1095 1518 179 13 133 chr17 66970045 66970497 -28302154 - RMER10B LTR ERVL 0 398 1 8 1095 278 254 0 0 chr17 66970635 66970694 -28301957 + Lx7 LINE L1 6902 6960 -736 8 1095 450 0 0 0 chr17 66970800 66970850 -28301801 + (TG)n Simple_repeat Simple_repeat 1 50 0 8 1095 270 221 59 0 chr17 66970852 66970920 -28301731 + Lx7 LINE L1 7550 7621 -75 8 1095 528 189 36 9 chr17 66970933 66971045 -28301606 - L1_Rod LINE L1 -1964 3883 3769 8 1095 754 208 90 136 chr17 66971056 66971204 -28301447 - L1_Rod LINE L1 -2495 3352 3219 8 1095 839 153 38 0 chr17 66971204 66971361 -28301290 + Lx3C LINE L1 6806 6968 -8 8 1095 754 208 90 136 chr17 66971361 66971601 -28301050 - L1_Rod LINE L1 -2629 3218 2982 8 1095 7879 60 19 3 chr17 66971569 66972573 -28300078 - L1_Mus3 LINE L1 0 6638 5619 8 1095 917 210 169 29 chr17 66972572 66972821 -28299830 - L1_Rod LINE L1 -2818 3029 2742 8 1095 189 0 0 0 chr17 66972821 66972842 -28299809 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 8 1095 917 210 169 29 chr17 66972842 66972906 -28299745 - L1_Rod LINE L1 -3106 2741 2672 8 1095 1795 176 49 36 chr17 66972910 66972941 -28299710 + ORR1C1 LTR MaLR 1 31 -347 8 1095 1345 105 5 16 chr17 66972941 66973134 -28299517 + B2_Mm1a SINE B2 1 191 -2 8 1095 1795 176 49 36 chr17 66973134 66973467 -28299184 + ORR1C1 LTR MaLR 32 370 -8 8 1095 1932 187 49 10 chr17 66973471 66973860 -28298791 - L1_Rod LINE L1 -3177 2670 2267 8 1095 1212 48 0 0 chr17 66973872 66974017 -28298634 - B1_Mm SINE Alu 0 147 3 8 1095 591 15 0 0 chr17 66974017 66974085 -28298566 + (TTTC)n Simple_repeat Simple_repeat 2 69 0 8 1095 4172 185 69 33 chr17 66974423 66975476 -28297175 - L1_Rod LINE L1 -3566 2281 1214 8 1095 2177 147 27 194 chr17 66975476 66976109 -28296542 - RLTR11A2 LTR ERVK 0 527 1 8 1095 4031 181 48 42 chr17 66976109 66976841 -28295810 - L1_Rod LINE L1 -6395 1213 453 8 1096 214 250 0 0 chr17 66977857 66977897 -28294754 + (TCCA)n Simple_repeat Simple_repeat 1 40 0 8 1096 486 49 0 0 chr17 66977898 66977959 -28294692 + (TTCTC)n Simple_repeat Simple_repeat 1 61 0 8 1096 693 134 0 0 chr17 66977962 66978074 -28294577 + (TTTC)n Simple_repeat Simple_repeat 3 114 0 8 1096 650 233 0 8 chr17 66978323 66978457 -28294194 + B1_Mur1 SINE Alu 15 147 -2 8 1096 325 288 8 56 chr17 66979251 66979334 -28293317 - MER34B-int LTR ERV1 -1692 3664 3587 8 1096 4441 173 76 12 chr17 66979334 66980187 -28292464 - RMER13B LTR ERVK 0 908 1 8 1096 325 288 8 56 chr17 66980187 66980228 -28292423 - MER34B-int LTR ERV1 -1770 3586 3546 8 1096 4190 24 0 0 chr17 66980467 66981000 -28291651 + MTA_Mm-int LTR MaLR 566 1098 0 8 1096 3250 29 31 0 chr17 66981000 66981384 -28291267 + MTA_Mm LTR MaLR 1 396 0 8 1096 386 309 53 0 chr17 66982112 66982300 -28290351 + L1MB3 LINE L1 5757 5954 -229 8 1096 309 268 26 26 chr17 66982317 66982432 -28290219 + L1MB3 LINE L1 6043 6157 -23 8 1096 324 0 0 0 chr17 66982874 66982910 -28289741 + (CA)n Simple_repeat Simple_repeat 1 36 0 8 1096 452 270 10 0 chr17 66983728 66983828 -28288823 + B4 SINE B4 1 101 -191 8 1096 913 266 58 4 chr17 66983863 66984024 -28288627 + MTD LTR MaLR 46 214 -205 8 1096 4327 78 34 0 chr17 66984024 66984589 -28288062 - MT2B2 LTR ERVL 0 584 1 8 1096 913 266 58 4 chr17 66984589 66984684 -28287967 + MTD LTR MaLR 215 315 -104 8 1096 1406 179 52 49 chr17 66984700 66984884 -28287767 + ORR1C2 LTR MaLR 60 237 -147 8 1096 2886 124 14 5 chr17 66984884 66985313 -28287338 + RLTR10C LTR ERVK 1 433 -3 8 1096 1406 179 52 49 chr17 66985313 66985452 -28287199 + ORR1C2 LTR MaLR 238 384 0 8 1096 350 325 48 0 chr17 66985467 66985593 -28287058 + B4 SINE B4 84 215 -77 8 1096 194 280 118 27 chr17 66985794 66985904 -28286747 + MIRc SINE MIR 19 138 -130 8 1096 408 229 151 8 chr17 66986507 66986626 -28286025 + B3 SINE B2 80 215 -1 8 1096 4986 126 70 15 chr17 66987324 66987373 -28285278 + Lx6 LINE L1 4972 5029 -851 8 1096 2198 190 84 43 chr17 66987373 66987934 -28284717 - RLTR31A_Mm LTR ERVK 0 584 1 8 1096 4986 126 68 15 chr17 66987934 66988781 -28283870 + Lx6 LINE L1 5030 5917 -1543 8 1096 1058 254 20 8 chr17 66988778 66989032 -28283619 + Lx7 LINE L1 7093 7349 -347 8 1096 23 33 0 0 chr17 66989040 66989070 -28283581 + AT_rich Low_complexity Low_complexity 1 30 0 8 1096 873 159 13 53 chr17 66989084 66989310 -28283341 + Lx7 LINE L1 7356 7572 -124 8 1096 762 212 4 94 chr17 66989297 66989354 -28283297 + Lx7 LINE L1 7457 7506 -190 8 1096 5097 82 28 7 chr17 66989354 66990046 -28282605 - L1Md_F2 LINE L1 0 6582 5877 8 1096 762 212 4 94 chr17 66990046 66990108 -28282543 + Lx7 LINE L1 7507 7558 -138 8 1096 1344 90 32 0 chr17 66990108 66990296 -28282355 - B2_Mm2 SINE B2 0 195 2 8 1096 762 212 4 94 chr17 66990296 66990430 -28282221 + Lx7 LINE L1 7559 7688 -8 8 1096 605 258 31 43 chr17 66991886 66992048 -28280603 - RSINE1 SINE B4 0 165 6 8 1096 370 216 143 8 chr17 66992577 66992703 -28279948 - ORR1E LTR MaLR 0 370 228 8 1096 317 173 12 96 chr17 66992720 66992748 -28279903 - RLTR23 LTR ERV1 -31 399 374 8 1096 2123 99 47 19 chr17 66992748 66993066 -28279585 + ORR1A2 LTR MaLR 1 327 0 8 1096 317 173 12 96 chr17 66993066 66993120 -28279531 - RLTR23 LTR ERV1 -57 373 324 8 1096 803 252 33 58 chr17 66993481 66993721 -28278930 - ORR1E LTR MaLR -113 246 13 8 1096 186 189 0 0 chr17 66994107 66994144 -28278507 + CT-rich Low_complexity Low_complexity 6 42 0 8 1096 1137 128 0 0 chr17 66994187 66994367 -28278284 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 8 1096 1161 74 0 0 chr17 66994376 66994524 -28278127 - B1_Mus1 SINE Alu 0 148 1 8 1096 459 0 0 0 chr17 66994804 66994855 -28277796 + (GA)n Simple_repeat Simple_repeat 2 52 0 8 1096 1984 177 16 42 chr17 66994873 66995257 -28277394 + ORR1C1 LTR MaLR 5 378 0 8 1096 975 257 60 28 chr17 66995633 66996013 -28276638 - L1MEc LINE L1 -3888 2431 2042 8 1096 1007 123 20 9 chr17 66996031 66996375 -28276276 + CT-rich Low_complexity Low_complexity 1 347 0 8 1096 1213 55 0 0 chr17 66996393 66996539 -28276112 - B1_Mm SINE Alu 0 147 2 8 1096 216 231 0 0 chr17 66996837 66996889 -28275762 + (CA)n Simple_repeat Simple_repeat 2 53 0 8 1096 1780 283 89 43 chr17 66996891 66998478 -28274173 - L1M2 LINE L1 -282 5598 3917 8 1096 2089 281 52 129 chr17 66998518 66998789 -28273862 - Lx5 LINE L1 -35 7015 6750 8 1096 4172 93 40 3 chr17 66998789 66999369 -28273282 - MT2B LTR ERVL 0 601 1 8 1096 2089 281 52 129 chr17 66999369 66999998 -28272653 - Lx5 LINE L1 -301 6749 6184 8 1096 6337 182 38 34 chr17 67000021 67001560 -28271091 - Lx6 LINE L1 -1343 6117 4572 1 1096 33906 72 1 16 chr17 67001561 67006741 -28265910 + L1Md_F2 LINE L1 487 5586 -297 2 1096 8259 46 1 5 chr17 67006741 67007741 -28264910 + L1Md_F2 LINE L1 5587 6582 0 2 1096 740 129 0 8 chr17 67007741 67007858 -28264793 - Lx6 LINE L1 -1297 4583 4468 1 1096 1735 300 130 21 chr17 67007851 67009026 -28263625 - Lx6 LINE L1 -1948 3932 2630 1 1096 22 0 0 0 chr17 67009058 67009080 -28263571 + AT_rich Low_complexity Low_complexity 1 22 0 3 1096 532 303 65 13 chr17 67009097 67009251 -28263400 - RSINE1 SINE B4 0 165 4 4 1096 333 295 111 37 chr17 67009265 67009670 -28262981 - Lx6 LINE L1 -3296 2584 2150 1 1096 203 309 0 0 chr17 67010095 67010150 -28262501 + CT-rich Low_complexity Low_complexity 3 57 0 5 1096 379 305 48 41 chr17 67010152 67010540 -28262111 - L1MEf LINE L1 -4155 2427 1870 6 1096 249 98 0 0 chr17 67010626 67010667 -28261984 + (T)n Simple_repeat Simple_repeat 1 41 0 7 1096 1251 150 26 108 chr17 67010872 67010987 -28261664 + RLTR9A LTR ERVK 122 222 -146 8 1096 1595 37 5 0 chr17 67010987 67011176 -28261475 - B2_Mm1t SINE B2 0 193 4 9 1096 1251 150 26 108 chr17 67011176 67011329 -28261322 + RLTR9A LTR ERVK 223 368 0 8 1096 848 98 8 0 chr17 67011438 67011571 -28261080 + (GGA)n Simple_repeat Simple_repeat 3 136 0 1 1096 246 32 0 0 chr17 67012335 67012366 -28260285 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1096 423 0 0 0 chr17 67012366 67012412 -28260239 + (GA)n Simple_repeat Simple_repeat 1 47 0 1 1096 1892 87 4 0 chr17 67013618 67013870 -28258781 - ORR1A2 LTR MaLR 0 327 75 1 1096 1387 231 110 114 chr17 67013884 67014846 -28257805 - RMER17B LTR ERVK -9 899 55 1 1096 578 193 61 0 chr17 67014832 67014946 -28257705 - ORR1A2 LTR MaLR -206 121 1 1 1096 656 252 117 40 chr17 67017288 67017497 -28255154 + MER2 DNA MER2_type 61 280 -65 1 1096 216 0 0 0 chr17 67017497 67017521 -28255130 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 1096 656 252 117 40 chr17 67017521 67017559 -28255092 + MER2 DNA MER2_type 281 326 -19 1 1096 302 321 83 36 chr17 67018342 67018594 -28254057 - L1M2 LINE L1 -4124 3044 2781 1 1096 477 287 43 0 chr17 67018669 67018784 -28253867 - RSINE1 SINE B4 -42 123 4 1 1096 447 318 73 55 chr17 67018786 67019225 -28253426 - L1M2 LINE L1 -4382 2786 2340 1 1096 300 360 10 0 chr17 67019238 67019338 -28253313 + PB1D10 SINE Alu 3 103 -14 2 1096 241 298 150 21 chr17 67019439 67019672 -28252979 - L1M2 LINE L1 -4935 2233 1971 1 1096 1226 88 0 0 chr17 67019978 67020137 -28252514 + B2_Mm2 SINE B2 2 160 -35 2 1096 358 324 72 41 chr17 67022552 67022618 -28250033 + RMER10A LTR ERVL 12 72 -370 2 1096 1128 169 87 0 chr17 67022618 67022825 -28249826 + URR1B DNA MER1_type 1 225 0 2 1096 358 285 88 34 chr17 67022825 67023109 -28249542 + RMER10A LTR ERVL 73 416 -26 2 1096 22 0 0 0 chr17 67023421 67023443 -28249208 + AT_rich Low_complexity Low_complexity 1 22 0 2 1096 429 20 0 0 chr17 67023446 67023496 -28249155 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1096 587 279 53 53 chr17 67023497 67023724 -28248927 - B4A SINE B4 -65 227 1 2 1096 192 40 0 0 chr17 67024344 67024369 -28248282 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1096 189 0 0 0 chr17 67024747 67024768 -28247883 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1096 327 49 0 0 chr17 67025374 67025415 -28247236 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1096 662 239 78 59 chr17 67026810 67027081 -28245570 + RLTR11B LTR ERVK 6 266 -311 3 1096 469 298 117 61 chr17 67027802 67028145 -28244506 - L1MC4a LINE L1 -23 7859 7498 3 1096 618 14 0 0 chr17 67028251 67028322 -28244329 + (TA)n Simple_repeat Simple_repeat 2 72 0 3 1096 652 305 70 36 chr17 67028398 67028732 -28243919 - L1MC4a LINE L1 -482 7400 7067 3 1096 259 331 98 15 chr17 67029007 67029139 -28243512 - RSINE1 SINE B4 -19 146 4 3 1096 415 248 53 0 chr17 67029408 67029522 -28243129 - ID4 SINE ID -11 141 12 3 1096 240 35 0 0 chr17 67030254 67030283 -28242368 + (TTA)n Simple_repeat Simple_repeat 2 30 0 3 1096 186 227 0 0 chr17 67030340 67030384 -28242267 + GA-rich Low_complexity Low_complexity 3 46 0 3 1096 225 0 0 0 chr17 67030384 67030409 -28242242 + (CAAAG)n Simple_repeat Simple_repeat 3 27 0 3 1096 356 263 0 16 chr17 67030874 67030965 -28241686 + ID4 SINE ID 5 92 -60 3 1096 231 312 45 18 chr17 67032148 67032259 -28240392 - MER5B DNA MER1_type -4 174 61 3 1096 421 326 145 31 chr17 67033608 67034276 -28238375 + L2a LINE L2 2360 3136 -290 4 1096 593 250 120 24 chr17 67034397 67034606 -28238045 + MER31A LTR ERV1 1 229 -256 4 1096 269 293 73 0 chr17 67034787 67034869 -28237782 + L2a LINE L2 3296 3383 -43 4 1096 216 0 0 0 chr17 67035742 67035766 -28236885 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 4 1096 247 263 14 4 chr17 67038933 67039015 -28233636 + L1MA6 LINE L1 6206 6295 -5 4 1096 2451 11 0 0 chr17 67040404 67040673 -28231978 + L1Md_T LINE L1 5318 5586 -297 4 1096 9153 6 0 0 chr17 67040673 67041669 -28230982 + L1Md_T LINE L1 5587 6582 0 4 1096 243 0 0 0 chr17 67041680 67041707 -28230944 + (A)n Simple_repeat Simple_repeat 1 27 0 4 1096 598 287 0 7 chr17 67044031 67044168 -28228483 - B3 SINE B2 -6 210 75 4 1096 477 264 93 13 chr17 67044285 67044435 -28228216 - B4A SINE B4 -129 163 2 4 1096 288 0 0 0 chr17 67046504 67046536 -28226115 + (GA)n Simple_repeat Simple_repeat 2 33 0 4 1096 1168 62 7 0 chr17 67048080 67048224 -28224427 - B1_Mus1 SINE Alu -1 147 3 4 1096 558 0 0 0 chr17 67048610 67048672 -28223979 + (TC)n Simple_repeat Simple_repeat 1 62 0 5 1096 462 246 25 38 chr17 67048738 67048905 -28223746 - L1MA4A LINE L1 -226 5945 5785 5 1096 181 324 27 81 chr17 67051912 67052023 -28220628 + MIR SINE MIR 77 181 -81 5 1096 391 294 82 59 chr17 67052031 67052201 -28220450 + MER5B DNA MER1_type 2 175 -3 5 1096 518 242 129 0 chr17 67053099 67053223 -28219428 - B1F SINE Alu -9 140 1 5 1096 389 255 61 10 chr17 67053984 67054083 -28218568 + MIRb SINE MIR 56 159 -109 5 1096 357 24 0 0 chr17 67054928 67054970 -28217681 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1096 309 296 0 73 chr17 67056051 67056175 -28216476 + PB1D10 SINE Alu 2 116 -1 5 1096 399 73 0 0 chr17 67056175 67056230 -28216421 + (GA)n Simple_repeat Simple_repeat 1 55 0 5 1096 804 36 9 18 chr17 67056233 67056347 -28216304 + (GGAGA)n Simple_repeat Simple_repeat 2 114 0 5 1096 914 287 23 54 chr17 67058516 67058774 -28213877 + B4A SINE B4 42 291 -1 6 1096 273 323 0 0 chr17 67059163 67059330 -28213321 + (TG)n Simple_repeat Simple_repeat 1 167 0 6 1096 3108 48 3 3 chr17 67059477 67059855 -28212796 + L1Md_F2 LINE L1 6203 6580 -2 6 1096 23 0 0 0 chr17 67059855 67059878 -28212773 + AT_rich Low_complexity Low_complexity 1 23 0 6 1096 262 296 111 58 chr17 67060600 67060869 -28211782 + ORR1E LTR MaLR 7 285 -85 6 1096 787 303 39 69 chr17 67061463 67061864 -28210787 + MTE2a LTR MaLR 8 398 -21 6 1096 1853 235 12 54 chr17 67061973 67062396 -28210255 - MTD LTR MaLR -14 405 1 6 1096 2195 30 114 0 chr17 67063571 67063833 -28208818 - RLTR10B LTR ERVK 0 292 1 6 1096 233 314 110 62 chr17 67063848 67063994 -28208657 + MLT1A1 LTR MaLR 256 408 0 6 1096 230 231 333 0 chr17 67064607 67064685 -28207966 - PB1 SINE Alu -21 106 3 6 1096 303 261 35 11 chr17 67066025 67066112 -28206539 + PB1D10 SINE Alu 14 99 -18 7 1096 21 0 0 0 chr17 67066151 67066172 -28206479 + AT_rich Low_complexity Low_complexity 1 21 0 7 1096 394 301 85 17 chr17 67066218 67066394 -28206257 - MER3 DNA MER1_type -7 202 15 7 1096 332 319 66 110 chr17 67066459 67066794 -28205857 - ORR1E LTR MaLR -21 338 19 7 1096 180 358 41 24 chr17 67066804 67066927 -28205724 - L2 LINE L2 -463 2956 2832 7 1096 25 0 0 0 chr17 67066937 67066962 -28205689 + AT_rich Low_complexity Low_complexity 1 25 0 7 1096 2284 167 87 40 chr17 67067441 67067945 -28204706 + RLTR11A LTR ERVK 1 528 0 7 1096 4869 221 116 26 chr17 67067945 67069171 -28203480 + Lx7 LINE L1 6362 7696 0 7 1096 243 0 0 0 chr17 67069961 67069988 -28202663 + (T)n Simple_repeat Simple_repeat 1 27 0 7 1096 759 197 133 17 chr17 67071163 67071344 -28201307 - B3 SINE B2 -14 202 1 7 1096 1284 57 68 0 chr17 67071626 67071802 -28200849 + B2_Mm2 SINE B2 1 188 -7 8 1096 455 287 72 63 chr17 67072367 67072687 -28199964 + MLT1A LTR MaLR 33 360 -14 8 1096 408 345 52 19 chr17 67072907 67073176 -28199475 - L1M5 LINE L1 -969 5177 4900 8 1096 416 316 45 76 chr17 67073276 67073564 -28199087 - L1M2 LINE L1 -2444 3699 3421 8 1096 620 318 78 0 chr17 67073582 67073705 -28198946 - MER2 DNA MER2_type -134 211 74 8 1096 450 0 0 0 chr17 67073705 67073755 -28198896 + (TC)n Simple_repeat Simple_repeat 2 51 0 8 1096 620 318 78 0 chr17 67073755 67073823 -28198828 - MER2 DNA MER2_type -272 73 6 8 1096 224 30 0 29 chr17 67075817 67075851 -28196800 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 8 1096 207 0 0 0 chr17 67076074 67076097 -28196554 + (TA)n Simple_repeat Simple_repeat 1 23 0 8 1096 342 0 0 0 chr17 67076285 67076323 -28196328 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 1096 813 54 0 0 chr17 67076323 67076433 -28196218 + (GA)n Simple_repeat Simple_repeat 1 111 0 8 1096 1136 73 0 0 chr17 67079085 67079222 -28193429 - B1_Mus1 SINE Alu -11 137 1 9 1096 211 355 49 35 chr17 67079222 67079365 -28193286 - MIR SINE MIR -45 217 73 9 1096 267 326 270 0 chr17 67080416 67080649 -28192002 + Charlie2a DNA MER1_type 10 305 -2556 9 1096 337 303 86 61 chr17 67080772 67080969 -28191682 + Charlie2a DNA MER1_type 758 959 -1902 9 1096 217 274 106 61 chr17 67081032 67081164 -28191487 - B2_Mm2 SINE B2 -4 191 54 9 1096 713 321 0 0 chr17 67081053 67081215 -28191436 - RSINE1 SINE B4 0 165 4 9 1096 352 296 17 34 chr17 67081994 67082155 -28190496 + B4 SINE B4 7 165 -127 9 1096 749 134 7 0 chr17 67082173 67082322 -28190329 + (TC)n Simple_repeat Simple_repeat 1 150 0 9 1096 21 0 0 0 chr17 67082326 67082347 -28190304 + AT_rich Low_complexity Low_complexity 1 21 0 9 1096 189 121 0 0 chr17 67083979 67084012 -28188639 + (CATA)n Simple_repeat Simple_repeat 4 36 0 9 1096 573 261 155 12 chr17 67084228 67084480 -28188171 - B4 SINE B4 -4 288 1 9 1096 259 309 0 0 chr17 67087052 67087133 -28185518 - L1MA8 LINE L1 -364 5948 5868 1 1096 306 160 14 71 chr17 67087142 67087283 -28185368 + (TA)n Simple_repeat Simple_repeat 1 133 0 1 1096 348 231 74 42 chr17 67087285 67087380 -28185271 - L1MA8 LINE L1 -502 5789 5692 1 1096 464 283 41 0 chr17 67087386 67087531 -28185120 + L1MA6 LINE L1 6120 6270 -30 1 1096 265 227 80 30 chr17 67088183 67088283 -28184368 + (CTGGGG)n Simple_repeat Simple_repeat 5 109 0 1 1096 201 267 194 22 chr17 67089495 67089629 -28183022 + L4 LINE RTE 178 334 -1695 1 1096 8158 50 1 11 chr17 67090347 67091790 -28180861 - L1Md_F2 LINE L1 0 6582 5156 1 1096 865 78 33 0 chr17 67092435 67092588 -28180063 + (GA)n Simple_repeat Simple_repeat 1 158 0 1 1096 630 209 28 21 chr17 67095300 67095442 -28177209 + MTD LTR MaLR 1 143 -276 1 1096 981 168 0 0 chr17 67096532 67096711 -28175940 + GA-rich Low_complexity Low_complexity 2 180 0 1 1096 360 298 17 17 chr17 67097160 67097276 -28175375 + L1ME3B LINE L1 5787 5902 -338 1 1096 836 220 126 0 chr17 67097419 67097601 -28175050 - B3 SINE B2 -11 205 1 1 1096 347 264 122 16 chr17 67097668 67097857 -28174794 + Charlie5 DNA MER1_type 2405 2613 -11 1 1096 378 61 0 0 chr17 67097941 67097990 -28174661 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1096 425 319 20 46 chr17 67098784 67098935 -28173716 - MER2 DNA MER2_type 0 345 199 1 1096 397 284 108 16 chr17 67099168 67099297 -28173354 - MER2 DNA MER2_type -202 143 3 1 1096 1106 264 30 98 chr17 67099411 67099810 -28172841 + MTE2a LTR MaLR 1 372 -7 1 1096 454 303 111 31 chr17 67101422 67101647 -28171004 + MIR SINE MIR 10 252 -10 1 1096 361 384 0 0 chr17 67102030 67102176 -28170475 + MER2 DNA MER2_type 70 215 -130 1 1096 46 78 0 0 chr17 67102622 67102724 -28169927 + AT_rich Low_complexity Low_complexity 1 102 0 1 1096 466 299 121 18 chr17 67103260 67103533 -28169118 + L1MA6 LINE L1 6000 6300 0 1 1096 265 252 53 68 chr17 67106191 67106418 -28166233 - RMER17A2 LTR ERVK -505 401 137 1 1096 362 200 97 71 chr17 67106568 67106681 -28165970 + MamRep434 DNA TcMar 97 212 -214 1 1096 205 240 104 26 chr17 67108401 67108478 -28164173 - MIRc SINE MIR -162 106 24 1 0 883 210 22 11 chr17 67108779 67108957 -28163694 + B3 SINE B2 2 181 -35 1 1097 279 273 0 0 chr17 67108962 67109039 -28163612 + (CA)n Simple_repeat Simple_repeat 1 77 0 1 1097 534 173 11 23 chr17 67109039 67109216 -28163435 + (CAGA)n Simple_repeat Simple_repeat 4 178 0 1 1097 480 322 107 33 chr17 67109255 67109470 -28163181 + B4A SINE B4 59 289 -3 1 1097 2089 169 16 8 chr17 67109973 67110344 -28162307 + ORR1D1 LTR MaLR 1 374 0 1 1097 344 291 29 80 chr17 67110345 67110483 -28162168 - MER3 DNA MER1_type -5 204 74 1 1097 267 319 48 20 chr17 67110953 67111105 -28161546 + MIRb SINE MIR 25 191 -77 1 1097 908 229 48 10 chr17 67113203 67113410 -28159241 + B3 SINE B2 2 216 0 1 1097 577 181 355 0 chr17 67114276 67114442 -28158209 + URR1B DNA MER1_type 1 225 0 1 1097 543 295 13 0 chr17 67114651 67114800 -28157851 + RSINE1 SINE B4 3 153 -12 1 1097 23 33 0 0 chr17 67114830 67114860 -28157791 + AT_rich Low_complexity Low_complexity 1 30 0 1 1097 24 32 0 0 chr17 67115366 67115397 -28157254 + AT_rich Low_complexity Low_complexity 1 31 0 1 1097 393 261 134 0 chr17 67115738 67115872 -28156779 - MTEa LTR MaLR -227 152 1 1 1097 5078 84 23 3 chr17 67116397 67117089 -28155562 + L1_Mus1 LINE L1 5862 6567 0 1 1097 1213 48 7 0 chr17 67117216 67117362 -28155289 - B1_Mus1 SINE Alu 0 148 2 1 1097 180 0 0 0 chr17 67119814 67119834 -28152817 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1 1097 355 346 21 16 chr17 67119998 67120186 -28152465 + LTR89 LTR ERVL? 691 879 0 1 1097 400 297 148 39 chr17 67122495 67122698 -28149953 + B4A SINE B4 66 290 -2 1 1097 510 17 0 0 chr17 67122992 67123051 -28149600 + (CATAT)n Simple_repeat Simple_repeat 5 63 0 1 1097 460 56 14 14 chr17 67123065 67123138 -28149513 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 1 1097 762 366 39 8 chr17 67123188 67123549 -28149102 + Lx8 LINE L1 6607 6978 -495 1 1097 616 282 199 19 chr17 67123561 67123923 -28148728 + Lx8 LINE L1 7042 7468 -5 1 1097 362 327 31 25 chr17 67124058 67124221 -28148430 + L1M2 LINE L1 5625 5788 -503 1 1097 324 0 0 0 chr17 67124319 67124355 -28148296 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1097 249 273 79 20 chr17 67125769 67125870 -28146781 + MLT1B LTR MaLR 1 107 -283 1 1097 278 294 11 84 chr17 67125884 67126062 -28146589 + Lx9 LINE L1 7308 7472 -172 1 1097 291 224 0 0 chr17 67126138 67126214 -28146437 + (CATA)n Simple_repeat Simple_repeat 4 79 0 1 1097 432 0 0 0 chr17 67126346 67126394 -28146257 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 1 1097 340 252 0 30 chr17 67126396 67126531 -28146120 + (CATATA)n Simple_repeat Simple_repeat 4 134 0 1 1097 1261 215 79 17 chr17 67127161 67127523 -28145128 + Lx7 LINE L1 7048 7696 0 1 1097 315 265 82 144 chr17 67127568 67127859 -28144792 - L1M5 LINE L1 -2193 3953 3681 1 1097 360 0 0 0 chr17 67127903 67127943 -28144708 + (TC)n Simple_repeat Simple_repeat 2 41 0 1 1097 294 29 0 0 chr17 67127943 67127977 -28144674 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1097 339 157 0 0 chr17 67128955 67129025 -28143626 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 1097 611 244 47 0 chr17 67129025 67129152 -28143499 - B1_Mm SINE Alu -3 144 12 1 1097 226 323 100 37 chr17 67129304 67129683 -28142968 - L1M5 LINE L1 -2868 3278 2876 1 1097 548 180 0 8 chr17 67130190 67130313 -28142338 + (TCCA)n Simple_repeat Simple_repeat 3 124 0 1 1097 200 217 0 32 chr17 67130311 67130373 -28142278 + (TCTG)n Simple_repeat Simple_repeat 1 60 0 1 1097 374 226 9 0 chr17 67130379 67130485 -28142166 + (TCCA)n Simple_repeat Simple_repeat 4 110 0 1 1097 717 103 0 0 chr17 67130809 67130926 -28141725 + (TG)n Simple_repeat Simple_repeat 2 118 0 1 1097 283 274 0 0 chr17 67130932 67131005 -28141646 - RSINE1 SINE B4 -40 125 53 1 1097 191 125 25 0 chr17 67131329 67131369 -28141282 + (TCTCCC)n Simple_repeat Simple_repeat 2 42 0 1 1097 539 342 60 28 chr17 67132656 67132939 -28139712 + B4A SINE B4 1 292 0 1 1097 189 148 16 47 chr17 67135930 67135994 -28136657 + T-rich Low_complexity Low_complexity 4 65 0 1 1097 540 81 0 0 chr17 67137030 67137104 -28135547 + (TCTA)n Simple_repeat Simple_repeat 3 76 0 1 1097 263 171 0 0 chr17 67137300 67137341 -28135310 + Lx6 LINE L1 35 75 -7653 1 1097 2564 158 78 2 chr17 67137337 67137393 -28135258 + Lx6 LINE L1 819 874 -6854 1 1097 198 0 0 0 chr17 67137393 67137415 -28135236 + (GA)n Simple_repeat Simple_repeat 2 23 0 1 1097 22803 149 50 61 chr17 67137415 67141278 -28131373 + Lx6 LINE L1 875 4636 -1244 1 1097 306 0 0 0 chr17 67141278 67141312 -28131339 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 1097 22803 193 83 46 chr17 67141312 67143983 -28128668 + Lx6 LINE L1 4637 7458 -2 1 1097 24 0 0 0 chr17 67145015 67145039 -28127612 + AT_rich Low_complexity Low_complexity 1 24 0 1 1097 37 52 0 0 chr17 67145639 67145697 -28126954 + AT_rich Low_complexity Low_complexity 1 58 0 1 1097 737 303 111 61 chr17 67147201 67147563 -28125088 - MER21B LTR ERV1 -168 695 316 1 1097 276 183 0 32 chr17 67147596 67147658 -28124993 - MER21B LTR ERV1 -628 235 176 1 1097 1195 68 0 0 chr17 67147738 67147884 -28124767 - B1_Mus2 SINE Alu 0 147 2 1 1097 567 0 0 0 chr17 67148821 67148884 -28123767 + (TTAGGG)n Simple_repeat Simple_repeat 1 63 0 1 1097 387 311 9 0 chr17 67148990 67149096 -28123555 - ID_B1 SINE B4 -22 202 96 1 1097 212 244 0 0 chr17 67150697 67150742 -28121909 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1097 574 246 149 50 chr17 67150812 67151073 -28121578 + B4A SINE B4 2 288 -4 1 1097 774 0 0 0 chr17 67151114 67151200 -28121451 + (TC)n Simple_repeat Simple_repeat 2 87 0 1 1097 763 138 14 0 chr17 67151582 67151720 -28120931 + G-rich Low_complexity Low_complexity 3 142 0 1 1097 209 146 0 40 chr17 67151846 67151896 -28120755 + G-rich Low_complexity Low_complexity 1 48 0 1 1097 241 319 17 21 chr17 67154371 67154464 -28118187 - MIRc SINE MIR -79 183 88 1 1097 2602 147 5 7 chr17 67154542 67154960 -28117691 - MTC LTR MaLR 0 421 5 1 1097 378 0 0 0 chr17 67155651 67155693 -28116958 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1097 279 0 0 0 chr17 67155693 67155723 -28116928 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 1097 2306 237 131 20 chr17 67156638 67157499 -28115152 + Lx7 LINE L1 6594 7692 -4 1 1097 284 158 18 0 chr17 67158033 67158090 -28114561 + (TTATA)n Simple_repeat Simple_repeat 3 60 0 1 1097 402 175 0 0 chr17 67158545 67158625 -28114026 + GA-rich Low_complexity Low_complexity 2 81 0 1 1097 23 0 0 0 chr17 67161396 67161419 -28111232 + AT_rich Low_complexity Low_complexity 1 23 0 1 1097 219 69 0 0 chr17 67161611 67161640 -28111011 + (TCCA)n Simple_repeat Simple_repeat 4 32 0 1 1097 284 58 0 71 chr17 67162477 67162533 -28110118 + (A)n Simple_repeat Simple_repeat 1 52 0 1 1097 189 94 0 0 chr17 67164433 67164465 -28108186 + (CTA)n Simple_repeat Simple_repeat 1 32 0 1 1097 324 0 0 0 chr17 67165219 67165255 -28107396 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1097 27 29 0 0 chr17 67165963 67165997 -28106654 + AT_rich Low_complexity Low_complexity 1 34 0 1 1097 229 227 0 0 chr17 67167496 67167540 -28105111 + (CAA)n Simple_repeat Simple_repeat 2 45 0 1 1097 362 269 139 51 chr17 67168142 67168495 -28104156 + Lx9 LINE L1 7236 7619 -25 1 1097 240 237 196 61 chr17 67169913 67170095 -28102556 - MER102a DNA MER1_type -30 300 83 1 1097 2374 166 24 7 chr17 67170095 67170509 -28102142 - MTC LTR MaLR 0 421 1 1 1097 240 237 196 61 chr17 67170509 67170555 -28102096 - MER102a DNA MER1_type -248 82 41 1 1097 194 347 185 7 chr17 67170655 67170806 -28101845 - MIRb SINE MIR -53 215 38 1 1097 213 39 0 0 chr17 67171151 67171177 -28101474 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 1 1097 227 239 94 42 chr17 67171512 67171608 -28101043 + L1MCa LINE L1 19 119 -5926 1 1097 355 304 97 84 chr17 67171820 67172021 -28100630 + L1MCa LINE L1 1499 1715 -5036 1 1097 1251 47 0 0 chr17 67172021 67172169 -28100482 + B1_Mus1 SINE Alu 1 148 0 1 1097 355 304 97 84 chr17 67172169 67172452 -28100199 + L1MCa LINE L1 1716 1988 -4763 1 1097 548 194 102 24 chr17 67173406 67173502 -28099149 - RLTR20B3 LTR ERVK 0 577 485 2 1097 453 116 0 0 chr17 67173502 67173571 -28099080 + (CA)n Simple_repeat Simple_repeat 2 70 0 2 1097 548 194 102 24 chr17 67173571 67173601 -28099050 - RLTR20B3 LTR ERVK -93 484 442 2 1097 1097 29 0 0 chr17 67173601 67173737 -28098914 - MTB LTR MaLR 0 400 265 2 1097 611 97 0 0 chr17 67173737 67173830 -28098821 - MT-int LTR MaLR -1005 93 1 2 1097 2346 57 136 3 chr17 67173966 67174062 -28098589 - MT2C_Mm LTR ERVL -75 400 304 2 1097 495 0 0 0 chr17 67174062 67174117 -28098534 + (GA)n Simple_repeat Simple_repeat 1 55 0 2 1097 2346 57 136 3 chr17 67174117 67174373 -28098278 - MT2C_Mm LTR ERVL -172 303 2 2 1097 1818 201 82 0 chr17 67174373 67174784 -28097867 - RLTR20B3 LTR ERVK -132 445 1 2 1097 511 230 80 6 chr17 67174790 67174965 -28097686 + L1MCa LINE L1 1973 2160 -4591 1 1097 733 279 36 112 chr17 67175103 67176069 -28096582 + L1MCa LINE L1 2403 3281 -3283 1 1097 308 299 52 0 chr17 67176075 67176172 -28096479 + ORR1E LTR MaLR 37 138 -221 2 1097 8250 199 54 52 chr17 67177469 67179659 -28092992 + Lx7 LINE L1 1256 3450 -2430 2 1097 4957 245 83 25 chr17 67179665 67180267 -28092384 + Lx7 LINE L1 5483 6181 -1515 2 1097 770 31 10 0 chr17 67180267 67180364 -28092287 + (TCTA)n Simple_repeat Simple_repeat 2 99 0 2 1097 4957 258 101 32 chr17 67180364 67181514 -28091137 + Lx7 LINE L1 6182 7350 -346 2 1097 258 58 18 55 chr17 67181538 67181593 -28091058 + (TTTTTG)n Simple_repeat Simple_repeat 1 53 0 2 1097 369 187 0 0 chr17 67181672 67181747 -28090904 + (TA)n Simple_repeat Simple_repeat 1 75 0 2 1097 25 51 0 0 chr17 67182213 67182252 -28090399 + AT_rich Low_complexity Low_complexity 1 39 0 2 1097 230 240 38 51 chr17 67182309 67182388 -28090263 - RLTR31_Mur LTR ERVK 0 553 476 2 1097 2198 239 55 16 chr17 67182356 67182934 -28089717 - RLTR17 LTR ERVK -90 602 2 2 1097 1102 187 235 20 chr17 67183018 67183324 -28089327 + ORR1C2 LTR MaLR 12 383 -1 2 1097 466 285 237 11 chr17 67183685 67183951 -28088700 + MTD LTR MaLR 79 404 -15 2 1097 343 245 27 75 chr17 67184277 67184403 -28088248 + MLT1A LTR MaLR 8 124 -241 2 1097 1581 241 83 24 chr17 67184575 67185035 -28087616 + Lx6 LINE L1 6948 7434 -26 2 1097 347 293 108 64 chr17 67186287 67186630 -28086021 + MLT1D LTR MaLR 13 370 -135 2 1097 201 245 0 36 chr17 67186835 67186890 -28085761 + CT-rich Low_complexity Low_complexity 3 55 0 2 1097 211 388 10 0 chr17 67187127 67187230 -28085421 + (CA)n Simple_repeat Simple_repeat 1 104 0 2 1097 298 331 31 16 chr17 67187750 67187879 -28084772 + L1MC5 LINE L1 6647 6777 -1184 2 1097 206 224 0 0 chr17 67188455 67188513 -28084138 + A-rich Low_complexity Low_complexity 1 58 0 2 1097 30 59 0 0 chr17 67189367 67189418 -28083233 + AT_rich Low_complexity Low_complexity 1 51 0 2 1097 1125 206 4 82 chr17 67189569 67189812 -28082839 + URR1B DNA MER1_type 2 225 0 2 1097 1574 169 138 64 chr17 67190315 67190707 -28081944 + MTC LTR MaLR 1 421 0 2 1097 296 192 27 0 chr17 67190730 67190803 -28081848 + (TATATG)n Simple_repeat Simple_repeat 4 78 0 2 1097 1296 49 0 0 chr17 67191468 67191713 -28080938 + (CA)n Simple_repeat Simple_repeat 1 245 0 2 1097 378 0 0 0 chr17 67194262 67194304 -28078347 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1097 307 319 28 62 chr17 67194337 67194481 -28078170 + RMER20B LTR ERVK 480 618 -9 2 1097 728 282 8 55 chr17 67194534 67194770 -28077881 + MERVK26-int LTR ERVK 62 286 -6633 2 1097 1873 106 42 13 chr17 67194770 67195076 -28077575 + Lx3B LINE L1 6658 6972 -1 2 1097 249 33 0 0 chr17 67195139 67195169 -28077482 + (CAAAA)n Simple_repeat Simple_repeat 4 33 0 2 1097 301 68 68 0 chr17 67197202 67197261 -28075390 + (CAGA)n Simple_repeat Simple_repeat 4 66 0 2 1097 748 286 57 113 chr17 67199333 67199739 -28072912 + MTC LTR MaLR 25 407 -14 2 1097 329 247 61 55 chr17 67200779 67200942 -28071709 - L1M5 LINE L1 -337 5787 5624 2 1097 5215 59 5 3 chr17 67201072 67201721 -28070930 + L1Md_F2 LINE L1 5933 6582 0 2 1097 491 292 83 59 chr17 67202702 67202906 -28069745 - B3A SINE B2 -6 210 2 2 1097 476 263 71 57 chr17 67204206 67204416 -28068235 - B4A SINE B4 -23 269 57 2 1097 302 243 215 0 chr17 67204870 67204977 -28067674 - B1_Mur1 SINE Alu -14 135 6 2 1097 265 314 103 11 chr17 67205773 67205947 -28066704 + MLT1A LTR MaLR 181 370 -4 2 1097 483 252 27 9 chr17 67206545 67206657 -28065994 - B3A SINE B2 -84 114 1 2 1097 189 0 0 0 chr17 67207421 67207442 -28065209 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2 1097 373 63 62 21 chr17 67211442 67211539 -28061112 + (TTG)n Simple_repeat Simple_repeat 2 102 0 2 1097 204 237 0 0 chr17 67212322 67212360 -28060291 + (TATG)n Simple_repeat Simple_repeat 2 39 0 2 1097 462 219 182 17 chr17 67212719 67212900 -28059751 - B3 SINE B2 -1 215 5 2 1097 358 238 108 2 chr17 67213010 67213153 -28059498 + L1MA8 LINE L1 6116 6279 -33 2 1097 211 200 0 0 chr17 67213160 67213205 -28059446 + (CCAA)n Simple_repeat Simple_repeat 3 47 0 2 1097 259 98 59 0 chr17 67213590 67213641 -28059010 + GA-rich Low_complexity Low_complexity 3 56 0 2 1097 626 68 0 11 chr17 67214729 67214818 -28057833 + (TCC)n Simple_repeat Simple_repeat 1 88 0 2 1097 303 197 65 13 chr17 67215222 67215299 -28057352 - ID4 SINE ID -2 81 1 2 1097 237 155 0 0 chr17 67215606 67215664 -28056987 + T-rich Low_complexity Low_complexity 1 58 0 2 1097 230 319 44 9 chr17 67215991 67216105 -28056546 + MLT1A1 LTR MaLR 291 408 0 2 1097 291 122 0 0 chr17 67216339 67216388 -28056263 + (GGGGA)n Simple_repeat Simple_repeat 4 52 0 2 1097 251 299 46 18 chr17 67216389 67216498 -28056153 + MER57C2 LTR ERV1 323 434 0 2 1097 1011 251 46 115 chr17 67216790 67217181 -28055470 - MTE2a LTR MaLR -10 369 6 2 1097 293 241 114 0 chr17 67221930 67222009 -28050642 + B3A SINE B2 3 90 -108 2 1097 648 214 38 0 chr17 67223294 67223425 -28049226 - B1_Mur2 SINE Alu -11 138 3 2 1097 917 90 0 0 chr17 67223433 67223566 -28049085 + B1_Mus1 SINE Alu 10 142 -6 2 1097 192 40 0 0 chr17 67223573 67223598 -28049053 + (CAA)n Simple_repeat Simple_repeat 2 26 0 2 1097 1397 227 75 11 chr17 67223649 67223997 -28048654 + MTD LTR MaLR 50 419 0 2 1097 519 181 6 31 chr17 67224721 67224881 -28047770 + (TA)n Simple_repeat Simple_repeat 2 157 0 2 1097 1455 85 16 0 chr17 67224958 67225147 -28047504 + B2_Mm2 SINE B2 4 195 0 2 1097 1314 209 55 80 chr17 67225403 67225767 -28046884 + ORR1D1 LTR MaLR 3 357 -17 2 1097 887 189 40 159 chr17 67225778 67226131 -28046520 + RLTRETN_Mm LTR ERVK 12 322 0 2 1097 212 184 0 20 chr17 67227907 67227957 -28044694 + CT-rich Low_complexity Low_complexity 2 50 0 2 1097 471 35 0 0 chr17 67228516 67228573 -28044078 + (GA)n Simple_repeat Simple_repeat 1 57 0 2 1097 217 342 26 0 chr17 67228727 67228803 -28043848 - ID2 SINE ID 0 83 6 2 1097 802 296 134 18 chr17 67229416 67229863 -28042788 - L1MB3 LINE L1 -49 6134 5636 2 1097 22 0 0 0 chr17 67230391 67230413 -28042238 + AT_rich Low_complexity Low_complexity 1 22 0 2 1097 413 323 13 19 chr17 67231879 67232037 -28040614 + L1MA5A LINE L1 6135 6291 -6 2 1097 519 95 0 0 chr17 67233334 67233408 -28039243 + (TTTTC)n Simple_repeat Simple_repeat 2 75 0 2 1097 4377 118 81 27 chr17 67234155 67235090 -28037561 + RMER17B LTR ERVK 1 958 0 2 1097 288 158 40 0 chr17 67236856 67236932 -28035719 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 2 1097 409 116 85 0 chr17 67236961 67237125 -28035526 + (TAGA)n Simple_repeat Simple_repeat 1 178 0 2 1097 216 0 0 0 chr17 67237604 67237628 -28035023 + (A)n Simple_repeat Simple_repeat 1 24 0 2 1097 1191 75 0 0 chr17 67238223 67238370 -28034281 + B1_Mus1 SINE Alu 2 148 0 2 1097 243 0 0 0 chr17 67238370 67238397 -28034254 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1097 376 282 55 0 chr17 67238585 67238695 -28033956 + PB1D9 SINE Alu 2 117 -3 2 1097 223 174 0 0 chr17 67239357 67239403 -28033248 + T-rich Low_complexity Low_complexity 1 46 0 2 1097 668 12 0 0 chr17 67239404 67239488 -28033163 - B1_Mm SINE Alu -1 146 63 2 1097 23 68 0 0 chr17 67239556 67239600 -28033051 + AT_rich Low_complexity Low_complexity 1 44 0 2 1098 21 0 0 0 chr17 67240645 67240666 -28031985 + AT_rich Low_complexity Low_complexity 1 21 0 2 1098 195 42 0 0 chr17 67241900 67241924 -28030727 + (TTA)n Simple_repeat Simple_repeat 1 24 0 2 1098 28 29 0 0 chr17 67242041 67242076 -28030575 + AT_rich Low_complexity Low_complexity 1 35 0 2 1098 21 0 0 0 chr17 67242264 67242285 -28030366 + AT_rich Low_complexity Low_complexity 1 21 0 2 1098 581 100 0 11 chr17 67242752 67242843 -28029808 + (GGA)n Simple_repeat Simple_repeat 1 90 0 2 1098 207 88 0 0 chr17 67243413 67243447 -28029204 + (A)n Simple_repeat Simple_repeat 1 34 0 2 1098 1069 79 18 35 chr17 67243963 67244134 -28028517 + B2_Mm2 SINE B2 28 195 0 2 1098 472 360 6 55 chr17 67244155 67244337 -28028314 - ID_B1 SINE B4 -29 195 23 2 1098 791 216 6 41 chr17 67245521 67245690 -28026961 + RSINE1 SINE B4 3 165 0 2 1098 213 187 40 0 chr17 67245693 67245768 -28026883 + (CA)n Simple_repeat Simple_repeat 1 78 0 2 1098 226 217 0 0 chr17 67245961 67246007 -28026644 - ID4_ SINE ID -22 61 16 2 1098 694 32 21 0 chr17 67246321 67246414 -28026237 + (CA)n Simple_repeat Simple_repeat 1 95 0 2 1098 258 105 0 0 chr17 67247074 67247112 -28025539 + (T)n Simple_repeat Simple_repeat 1 38 0 2 1098 367 289 148 19 chr17 67248087 67248249 -28024402 + B4A SINE B4 106 288 -4 2 1098 22 35 0 0 chr17 67248272 67248301 -28024350 + AT_rich Low_complexity Low_complexity 1 29 0 2 1098 638 13 13 0 chr17 67248417 67248496 -28024155 + (TCTA)n Simple_repeat Simple_repeat 1 80 0 2 1098 1467 60 16 16 chr17 67249169 67249355 -28023296 + B2_Mm2 SINE B2 1 186 -9 2 1098 382 261 58 75 chr17 67249477 67249651 -28023000 + B4A SINE B4 2 172 -120 2 1098 486 0 0 0 chr17 67249727 67249781 -28022870 + (TC)n Simple_repeat Simple_repeat 1 54 0 2 1098 387 0 0 0 chr17 67249781 67249823 -28022828 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 1098 1570 109 5 5 chr17 67250672 67250894 -28021757 + URR1A DNA MER1_type 5 226 0 3 1098 320 312 18 9 chr17 67251484 67251597 -28021054 + ID_B1 SINE B4 88 201 -23 3 1098 276 53 0 0 chr17 67251610 67251648 -28021003 + (CAA)n Simple_repeat Simple_repeat 1 38 0 3 1098 215 352 0 32 chr17 67251653 67251747 -28020904 + ID_B1 SINE B4 79 169 -55 3 1098 301 213 19 20 chr17 67252297 67252380 -28020271 - B1F SINE Alu -47 102 23 3 1098 339 24 0 0 chr17 67253268 67253285 -28019366 + (TA)n Simple_repeat Simple_repeat 1 17 0 3 1098 333 0 0 0 chr17 67253285 67253322 -28019329 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1098 339 24 0 0 chr17 67253322 67253346 -28019305 + (TA)n Simple_repeat Simple_repeat 1 24 0 3 1098 463 257 10 3 chr17 67254199 67254319 -28018332 + B1_Mur3 SINE Alu 2 120 0 3 1098 962 205 44 5 chr17 67254625 67254831 -28017820 + B3 SINE B2 3 216 0 3 1098 236 211 81 28 chr17 67255327 67255407 -28017244 + MTEb LTR MaLR 284 368 -11 3 1098 480 290 205 27 chr17 67257767 67258026 -28014625 + MER67A LTR ERV1 2 306 -237 3 1098 768 273 148 19 chr17 67258311 67258636 -28014015 + MTEa LTR MaLR 3 369 -10 3 1098 290 211 10 0 chr17 67259117 67259221 -28013430 + (TG)n Simple_repeat Simple_repeat 2 106 0 3 1098 248 130 22 0 chr17 67261893 67261939 -28010712 + GA-rich Low_complexity Low_complexity 4 50 0 3 1098 314 308 80 29 chr17 67263427 67263564 -28009087 + MER58A DNA MER1_type 37 180 -44 3 1098 284 275 0 14 chr17 67263617 67263687 -28008964 - ID4_ SINE ID -8 75 7 3 1098 21 0 0 0 chr17 67264412 67264433 -28008218 + AT_rich Low_complexity Low_complexity 1 21 0 3 1098 248 0 31 0 chr17 67267637 67267669 -28004982 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1098 254 345 117 9 chr17 67267866 67267977 -28004674 + PB1 SINE Alu 2 124 -3 3 1098 253 204 0 69 chr17 67269868 67269926 -28002725 - B4 SINE B4 0 292 239 3 1098 354 102 44 22 chr17 67270466 67270556 -28002095 + (CAGAGA)n Simple_repeat Simple_repeat 3 94 0 3 1098 358 253 40 33 chr17 67271748 67271899 -28000752 + Tigger7 DNA MER2_type 2313 2464 -27 3 1098 300 264 209 0 chr17 67272945 67273036 -27999615 - RSINE1 SINE B4 -21 144 35 3 1098 5378 108 4 1 chr17 67273134 67273894 -27998757 - L1_Mm LINE L1 -675 5208 4447 3 1098 5859 54 28 4 chr17 67273895 67274622 -27998029 + L1_Mus1 LINE L1 5824 6567 0 3 1098 342 299 97 49 chr17 67274739 67274883 -27997768 - RSINE1 SINE B4 -4 161 11 3 1098 468 0 0 0 chr17 67275753 67275805 -27996846 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1098 467 314 47 59 chr17 67277225 67277394 -27995257 + B3A SINE B2 1 167 -31 3 1098 20295 154 33 11 chr17 67277664 67281624 -27991027 + L1_Mur1 LINE L1 876 4922 -955 3 1098 5126 164 88 9 chr17 67281597 67282586 -27990065 + Lx4B LINE L1 5990 7056 -2 3 1098 291 98 16 32 chr17 67284228 67284291 -27988360 + (TTA)n Simple_repeat Simple_repeat 3 64 0 3 1098 351 292 10 0 chr17 67286145 67286241 -27986410 + (CA)n Simple_repeat Simple_repeat 2 98 0 3 1098 297 51 0 0 chr17 67287640 67287679 -27984972 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1098 408 20 0 0 chr17 67288818 67288867 -27983784 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1098 273 243 0 67 chr17 67289700 67289819 -27982832 + C-rich Low_complexity Low_complexity 1 111 0 3 1098 912 258 21 0 chr17 67290167 67290361 -27982290 + ID_B1 SINE B4 5 202 -22 3 1098 502 260 72 13 chr17 67290570 67290722 -27981929 - Lx8 LINE L1 -77 7396 7236 3 1098 225 0 0 0 chr17 67290743 67290768 -27981883 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 3 1098 588 29 0 0 chr17 67290769 67290839 -27981812 + (TC)n Simple_repeat Simple_repeat 1 70 0 3 1098 228 67 0 0 chr17 67290839 67290868 -27981783 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1098 272 329 47 0 chr17 67291349 67291434 -27981217 - PB1 SINE Alu -10 117 29 3 1098 268 296 0 0 chr17 67291478 67291559 -27981092 + Charlie19a DNA Charlie 109 189 -197 3 1098 21 36 0 0 chr17 67292674 67292702 -27979949 + AT_rich Low_complexity Low_complexity 1 28 0 3 1098 564 272 37 48 chr17 67294160 67294349 -27978302 + MER3 DNA MER1_type 7 193 -16 3 1098 335 319 128 6 chr17 67295178 67295342 -27977309 + RMER20B LTR ERVK 143 326 -301 3 1098 184 188 0 0 chr17 67297825 67297857 -27974794 - MIRm SINE MIR -4 272 241 3 1098 615 268 127 35 chr17 67298675 67298872 -27973779 - B3 SINE B2 -1 215 1 3 1098 397 90 30 0 chr17 67302680 67302747 -27969904 + (TCTA)n Simple_repeat Simple_repeat 3 71 0 3 1098 599 128 33 20 chr17 67302782 67302934 -27969717 + (TCTA)n Simple_repeat Simple_repeat 1 154 0 3 1098 258 222 19 0 chr17 67302980 67303034 -27969617 + L1M5 LINE L1 5719 5773 -391 3 1098 558 296 12 0 chr17 67303910 67304072 -27968579 + RSINE1 SINE B4 2 165 0 3 1098 349 323 87 59 chr17 67305371 67305943 -27966708 + Lx8 LINE L1 6884 7471 -2 3 1098 621 43 0 88 chr17 67307904 67308006 -27964645 + L1_Mus2 LINE L1 6474 6566 0 3 1098 564 128 12 0 chr17 67308009 67308120 -27964531 + L1_Mm LINE L1 1409 1522 -4361 3 1098 565 240 140 97 chr17 67308259 67308609 -27964042 + RLTR9A LTR ERVK 4 368 0 3 1098 399 302 39 29 chr17 67308791 67308999 -27963652 + Lx8 LINE L1 7264 7473 0 3 1098 319 350 24 16 chr17 67311714 67311839 -27960812 + B1F2 SINE Alu 3 128 -21 3 1098 1231 272 106 37 chr17 67312472 67313010 -27959641 + Lx8 LINE L1 6899 7473 0 3 1098 1136 83 16 19 chr17 67313493 67313696 -27958955 + MTB_Mm LTR MaLR 150 352 -55 3 1098 1859 188 60 55 chr17 67313787 67313936 -27958715 + L1_Mur3 LINE L1 2307 2444 -3436 3 1098 6806 42 3 3 chr17 67313936 67314716 -27957935 - L1Md_F2 LINE L1 -2 6580 5801 3 1098 1859 188 60 55 chr17 67314716 67315000 -27957651 + L1_Mur3 LINE L1 2445 2742 -3138 3 1098 752 242 50 15 chr17 67315353 67315554 -27957097 - B3 SINE B2 -4 212 5 3 1098 284 167 273 0 chr17 67317158 67317224 -27955427 + B3 SINE B2 47 130 -86 3 1098 468 183 0 0 chr17 67317280 67317373 -27955278 + (TA)n Simple_repeat Simple_repeat 1 93 0 3 1098 244 227 26 13 chr17 67317506 67317582 -27955069 + (TA)n Simple_repeat Simple_repeat 2 78 0 3 1098 243 0 0 0 chr17 67317667 67317694 -27954957 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1098 21 0 0 0 chr17 67317818 67317839 -27954812 + AT_rich Low_complexity Low_complexity 1 21 0 3 1098 345 311 107 0 chr17 67318498 67318620 -27954031 - B1F1 SINE Alu -10 139 5 3 1098 316 281 69 79 chr17 67318729 67319041 -27953610 - RSINE1 SINE B4 -14 278 1 3 1098 191 36 36 0 chr17 67320026 67320054 -27952597 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 1098 507 33 0 0 chr17 67321019 67321080 -27951571 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 1098 1442 288 107 33 chr17 67322189 67323507 -27949144 - L1MB7 LINE L1 -29 6155 4744 3 1098 667 320 141 50 chr17 67323839 67324300 -27948351 + MER67A LTR ERV1 1 655 -6 3 1098 257 109 22 0 chr17 67324747 67324793 -27947858 + (GGGA)n Simple_repeat Simple_repeat 4 50 0 3 1098 486 33 0 0 chr17 67326896 67326956 -27945695 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 1098 313 277 157 42 chr17 67327645 67327868 -27944783 + RLTR12B LTR ERVK 55 284 -244 3 1098 353 240 0 13 chr17 67328181 67328257 -27944394 + ID4_ SINE ID 2 76 -7 3 1098 254 164 0 18 chr17 67328468 67328524 -27944127 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1098 251 233 205 0 chr17 67328586 67328666 -27943985 + PB1D7 SINE Alu 14 112 -8 3 1098 598 171 0 43 chr17 67330306 67330544 -27942107 + (CATATA)n Simple_repeat Simple_repeat 1 227 0 3 1098 843 221 63 34 chr17 67331023 67331037 -27941614 - B3 SINE B2 -4 212 199 3 1098 258 32 0 0 chr17 67331037 67331068 -27941583 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 3 1098 843 221 63 34 chr17 67331068 67331259 -27941392 - B3 SINE B2 -18 198 1 3 1098 558 108 0 0 chr17 67331813 67331896 -27940755 + (GGA)n Simple_repeat Simple_repeat 2 84 0 3 1098 339 35 35 17 chr17 67332648 67332706 -27939945 + (TTA)n Simple_repeat Simple_repeat 3 61 0 3 1098 23 0 0 0 chr17 67332706 67332729 -27939922 + AT_rich Low_complexity Low_complexity 1 23 0 3 1098 399 309 99 2 chr17 67332894 67333166 -27939485 - L1MA4 LINE L1 0 6300 6005 3 1098 226 190 69 0 chr17 67333166 67333224 -27939427 - ORR1E LTR MaLR 0 359 298 3 1098 468 246 9 0 chr17 67333438 67333552 -27939099 + MT2A LTR ERVL 1 115 -418 3 1098 405 272 10 10 chr17 67333558 67333662 -27938989 + RLTR18B LTR ERVK 29 132 -380 3 1098 497 322 11 48 chr17 67334467 67334656 -27937995 - B3A SINE B2 -16 182 1 3 1098 182 288 0 57 chr17 67335215 67335285 -27937366 - MIR SINE MIR -22 240 175 3 1098 1329 290 45 26 chr17 67336134 67336598 -27936053 + Lx8 LINE L1 6722 7194 -279 3 1098 598 307 153 14 chr17 67337820 67338167 -27934484 + MTD LTR MaLR 13 407 -12 3 1098 341 355 8 0 chr17 67338434 67338555 -27934096 + MER2B DNA MER2_type 215 336 0 3 1098 945 222 35 0 chr17 67339328 67339531 -27933120 - B3 SINE B2 -1 215 6 3 1098 216 0 0 0 chr17 67340101 67340125 -27932526 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 3 1098 242 57 56 19 chr17 67340420 67340474 -27932177 + (CAAAA)n Simple_repeat Simple_repeat 1 56 0 3 1098 1440 310 142 65 chr17 67341156 67342241 -27930410 + Lx8 LINE L1 6305 7473 0 3 1098 1233 175 8 37 chr17 67342567 67342810 -27929841 - RLTR20B1 LTR ERVK 0 563 328 3 1098 814 171 81 17 chr17 67342805 67342978 -27929673 - RLTR20B1 LTR ERVK -356 207 24 3 1098 247 172 155 0 chr17 67343021 67343079 -27929572 - Lx9 LINE L1 -294 7350 7284 4 1098 276 258 22 22 chr17 67343395 67343486 -27929165 + (TATG)n Simple_repeat Simple_repeat 2 92 0 4 1098 328 315 62 8 chr17 67343512 67343640 -27929011 - RSINE1 SINE B4 -28 137 3 4 1098 360 111 0 0 chr17 67345157 67345220 -27927431 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 1098 22 35 0 0 chr17 67345236 67345265 -27927386 + AT_rich Low_complexity Low_complexity 1 29 0 4 1098 197 344 0 0 chr17 67345330 67345391 -27927260 - MIRc SINE MIR -144 124 64 4 1098 1213 241 6 51 chr17 67345423 67345738 -27926913 + MTD LTR MaLR 42 342 -77 4 1098 590 71 0 12 chr17 67346752 67346837 -27925814 + (TTTC)n Simple_repeat Simple_repeat 3 86 0 4 1098 625 88 92 30 chr17 67346830 67346994 -27925657 + CT-rich Low_complexity Low_complexity 3 176 0 4 1098 369 0 0 0 chr17 67346994 67347035 -27925616 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 4 1098 1358 174 5 0 chr17 67348669 67348893 -27923758 - URR1B DNA MER1_type 0 225 1 4 1098 673 150 15 23 chr17 67349252 67349382 -27923269 + MTC LTR MaLR 1 129 -292 4 1098 1579 179 0 7 chr17 67349507 67349806 -27922845 + MTC LTR MaLR 125 421 0 4 1098 2549 112 86 42 chr17 67350470 67350925 -27921726 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1098 3031 44 6 0 chr17 67350925 67351580 -27921071 + IAPEz-int LTR ERVK 8 591 -5890 4 1098 454 66 0 32 chr17 67351612 67351675 -27920976 + IAPEz-int LTR ERVK 1359 1419 -5062 4 1098 1862 111 4 4 chr17 67351664 67351926 -27920725 + IAPEz-int LTR ERVK 2236 2497 -5183 4 1098 937 88 24 0 chr17 67351921 67352046 -27920605 + IAPEz-int LTR ERVK 4783 4910 -2770 4 1098 27429 7 2 0 chr17 67352046 67354998 -27917653 + IAPEz-int LTR ERVK 3525 6481 0 4 1098 2300 105 87 42 chr17 67354998 67355445 -27917206 + IAPLTR2_Mm LTR ERVK 1 467 -8 4 1098 225 0 0 0 chr17 67358203 67358228 -27914423 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 1098 250 248 54 122 chr17 67358484 67358631 -27914020 + B1F SINE Alu 3 139 -10 4 1098 440 270 67 58 chr17 67358643 67358864 -27913787 + B3A SINE B2 1 214 -2 4 1098 3446 45 119 16 chr17 67358878 67359325 -27913326 + MT2_Mm LTR ERVL 1 493 0 4 1098 393 22 0 0 chr17 67359502 67359548 -27913103 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1098 260 211 14 0 chr17 67360200 67360271 -27912380 + GA-rich Low_complexity Low_complexity 3 74 0 4 1098 393 384 111 20 chr17 67360273 67360571 -27912080 - MTEa LTR MaLR -54 325 1 4 1098 180 0 0 0 chr17 67362093 67362113 -27910538 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 1098 567 241 81 19 chr17 67363139 67363300 -27909351 + MTE2a LTR MaLR 8 178 -201 4 1098 2089 216 45 9 chr17 67363300 67363749 -27908902 + Lx9 LINE L1 6970 7434 -210 4 1098 312 70 0 0 chr17 67364612 67364655 -27907996 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 1098 326 408 0 0 chr17 67364669 67364848 -27907803 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 1098 587 327 87 32 chr17 67364921 67365139 -27907512 - B4 SINE B4 -16 276 47 4 1098 1086 197 9 36 chr17 67367808 67368029 -27904622 + B3 SINE B2 2 216 0 4 1099 570 213 13 54 chr17 67371692 67371841 -27900810 + URR1B DNA MER1_type 83 225 0 4 1099 325 286 33 0 chr17 67371995 67372086 -27900565 + B1F SINE Alu 1 94 -55 4 1099 910 273 152 24 chr17 67372413 67372874 -27899777 - L1MC1 LINE L1 -296 6037 5518 4 1099 3141 158 71 99 chr17 67374020 67374836 -27897815 + RLTR40 LTR ERVK 19 811 -6 4 1099 627 205 8 0 chr17 67374947 67375069 -27897582 - B1_Mus1 SINE Alu 0 148 26 4 1099 496 277 40 13 chr17 67375123 67375273 -27897378 + RSINE1 SINE B4 12 165 0 4 1099 214 206 16 16 chr17 67375292 67375356 -27897295 + (CATA)n Simple_repeat Simple_repeat 4 67 0 4 1099 192 40 0 0 chr17 67375368 67375393 -27897258 + (TAA)n Simple_repeat Simple_repeat 2 26 0 4 1099 252 0 0 0 chr17 67375978 67376006 -27896645 + (T)n Simple_repeat Simple_repeat 1 28 0 4 1099 191 36 36 0 chr17 67376568 67376596 -27896055 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4 1099 1007 260 34 107 chr17 67377012 67377395 -27895256 - MTEa LTR MaLR -23 356 2 4 1099 405 267 50 55 chr17 67378739 67378921 -27893730 + RLTR42-int LTR ERVK 1220 1400 -4122 4 1099 303 93 0 0 chr17 67379175 67379218 -27893433 + (CTTA)n Simple_repeat Simple_repeat 1 43 0 4 1099 1166 64 13 0 chr17 67379218 67379375 -27893276 - B2_Mm2 SINE B2 -34 161 3 4 1099 1733 161 15 63 chr17 67381575 67381973 -27890678 - RLTR31A_Mm LTR ERVK -205 379 1 4 1099 354 115 0 0 chr17 67382846 67382907 -27889744 + (TA)n Simple_repeat Simple_repeat 2 62 0 4 1099 224 329 14 28 chr17 67383883 67383955 -27888696 + ID4_ SINE ID 9 79 -4 4 1099 3424 269 69 49 chr17 67386228 67387757 -27884894 - Lx9 LINE L1 -1612 6032 4437 4 1099 2464 292 71 28 chr17 67387767 67388770 -27883881 + Lx9 LINE L1 6450 7495 -149 4 1099 180 0 0 0 chr17 67389316 67389336 -27883315 + (TTTTC)n Simple_repeat Simple_repeat 1 20 0 4 1099 267 206 13 128 chr17 67389337 67389415 -27883236 - B1_Mur2 SINE Alu -12 108 40 4 1099 825 295 21 14 chr17 67389547 67389836 -27882815 + B4 SINE B4 1 291 -1 4 1099 283 361 18 6 chr17 67389848 67390018 -27882633 + (CA)n Simple_repeat Simple_repeat 1 172 0 4 1099 400 328 73 0 chr17 67390220 67390412 -27882239 - MER2 DNA MER2_type -118 227 22 4 1099 675 130 17 0 chr17 67390461 67390576 -27882075 - B1_Mus2 SINE Alu -2 145 29 4 1099 246 302 40 79 chr17 67390498 67390624 -27882027 - RLTR25A LTR ERVK -522 581 461 4 1099 722 244 91 53 chr17 67391920 67392128 -27880523 + B3 SINE B2 1 216 0 4 1099 725 312 9 5 chr17 67392284 67392506 -27880145 + ID_B1 SINE B4 2 224 0 4 1099 334 279 38 19 chr17 67392752 67392858 -27879793 + ID_B1 SINE B4 77 184 -40 4 1099 262 321 0 36 chr17 67393558 67393668 -27878983 + GA-rich Low_complexity Low_complexity 2 107 0 4 1099 467 246 115 66 chr17 67396995 67397239 -27875412 - LTR79 LTR ERVL -39 488 233 4 1099 308 244 0 47 chr17 67397323 67397409 -27875242 - LTR79 LTR ERVL -436 91 10 4 1099 912 50 0 0 chr17 67397611 67397732 -27874919 + B1_Mm SINE Alu 1 121 -26 4 1099 371 375 44 13 chr17 67398223 67398450 -27874201 + MLT1D LTR MaLR 4 237 -268 4 1099 293 252 38 19 chr17 67398721 67398826 -27873825 - L1M4 LINE L1 -819 5327 5221 4 1099 402 304 43 47 chr17 67398845 67399080 -27873571 + L1M4 LINE L1 4704 4937 -1209 4 1099 26 0 0 0 chr17 67399088 67399114 -27873537 + AT_rich Low_complexity Low_complexity 1 26 0 4 1099 2869 58 8 3 chr17 67399256 67399622 -27873029 + L1_Mus1 LINE L1 6199 6566 -1 4 1099 404 328 78 33 chr17 67399707 67399950 -27872701 + B4A SINE B4 3 256 -36 4 1099 497 83 12 0 chr17 67399960 67400044 -27872607 + (CA)n Simple_repeat Simple_repeat 2 86 0 4 1099 635 275 38 2 chr17 67400081 67400355 -27872296 + L1M4 LINE L1 5174 5456 -724 4 1099 269 260 13 25 chr17 67400562 67400641 -27872010 + L1M4 LINE L1 5811 5888 -295 4 1099 22 0 0 0 chr17 67401074 67401096 -27871555 + AT_rich Low_complexity Low_complexity 1 22 0 4 1099 656 317 103 31 chr17 67401117 67401475 -27871176 + Lx8 LINE L1 6911 7294 -179 4 1099 327 49 0 0 chr17 67404457 67404498 -27868153 + (CATA)n Simple_repeat Simple_repeat 2 42 0 4 1099 329 208 0 53 chr17 67404499 67404651 -27868000 + (TA)n Simple_repeat Simple_repeat 2 145 0 4 1099 392 335 13 19 chr17 67405630 67405788 -27866863 - RSINE1 SINE B4 -6 159 3 4 1099 387 0 0 0 chr17 67406051 67406094 -27866557 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1099 327 49 0 0 chr17 67406095 67406136 -27866515 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 1099 720 244 49 19 chr17 67406572 67406777 -27865874 + B3 SINE B2 1 211 -5 4 1099 428 361 59 45 chr17 67407585 67407872 -27864779 + B4 SINE B4 2 292 0 4 1099 230 167 37 0 chr17 67407961 67408015 -27864636 + (CATATA)n Simple_repeat Simple_repeat 1 56 0 4 1099 425 176 11 0 chr17 67408380 67408445 -27864206 + polypurine Low_complexity Low_complexity 3 68 0 4 1099 1045 128 0 11 chr17 67408445 67408627 -27864024 + (GGA)n Simple_repeat Simple_repeat 1 180 0 4 1099 425 176 11 0 chr17 67408627 67408652 -27863999 + polypurine Low_complexity Low_complexity 69 93 0 4 1099 401 254 186 0 chr17 67408895 67409013 -27863638 + B1F SINE Alu 10 149 0 4 1099 405 313 52 9 chr17 67409031 67409260 -27863391 + MER2 DNA MER2_type 107 345 0 4 1099 298 321 90 15 chr17 67409338 67409471 -27863180 + MER5B DNA MER1_type 7 149 -29 4 1099 1187 56 0 0 chr17 67409578 67409722 -27862929 + B1_Mus2 SINE Alu 1 144 -3 4 1099 351 0 0 0 chr17 67409722 67409761 -27862890 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 4 1099 1028 129 6 0 chr17 67410391 67410561 -27862090 + (GAA)n Simple_repeat Simple_repeat 3 173 0 4 1099 1003 126 23 0 chr17 67410569 67410744 -27861907 + (GGAGAA)n Simple_repeat Simple_repeat 2 180 0 4 1099 558 43 0 0 chr17 67410744 67410813 -27861838 + (GAAA)n Simple_repeat Simple_repeat 1 69 0 4 1099 291 246 6 23 chr17 67411860 67412035 -27860616 + GA-rich Low_complexity Low_complexity 1 172 0 4 1099 299 171 13 0 chr17 67414512 67414588 -27858063 + (CA)n Simple_repeat Simple_repeat 2 78 0 4 1099 599 286 51 51 chr17 67415374 67415647 -27857004 + MTD LTR MaLR 1 273 -146 4 1099 387 264 25 8 chr17 67415717 67415839 -27856812 + MTD LTR MaLR 296 419 0 4 1099 503 274 102 55 chr17 67416520 67416668 -27855983 + MER31-int LTR ERV1 910 1065 -3871 4 1099 587 48 12 0 chr17 67416668 67416751 -27855900 + (TG)n Simple_repeat Simple_repeat 2 85 0 4 1099 503 274 102 55 chr17 67416751 67416876 -27855775 + MER31-int LTR ERV1 1066 1196 -3740 4 1099 375 60 0 0 chr17 67420027 67420077 -27852574 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 4 1099 236 306 23 12 chr17 67421359 67421445 -27851206 + PB1D10 SINE Alu 10 96 -21 4 1099 274 307 53 30 chr17 67422646 67422777 -27849874 + AmnSINE1 SINE SINE 268 401 -174 4 1099 378 306 106 39 chr17 67423255 67423537 -27849114 + L1M5 LINE L1 5460 5760 -480 4 1099 184 301 0 27 chr17 67423956 67424106 -27848545 + (CATA)n Simple_repeat Simple_repeat 1 146 0 4 1099 468 221 7 13 chr17 67425499 67425650 -27847001 + GA-rich Low_complexity Low_complexity 3 152 0 4 1099 269 286 75 9 chr17 67426494 67426600 -27846051 + L1MD1 LINE L1 5618 5730 -512 4 1099 4367 47 11 6 chr17 67426617 67427156 -27845495 - L1Md_F3 LINE L1 0 6584 6043 4 1099 1235 47 0 0 chr17 67427156 67427306 -27845345 + L1Md_F3 LINE L1 5920 6069 -515 4 1099 315 49 0 0 chr17 67427361 67427402 -27845249 + (CAA)n Simple_repeat Simple_repeat 2 42 0 5 1099 300 333 13 32 chr17 67427474 67427632 -27845019 + L1MD1 LINE L1 5880 6034 -208 4 1099 2073 94 3 21 chr17 67427933 67428258 -27844393 + ORR1A2 LTR MaLR 1 319 -8 5 1099 30 27 0 0 chr17 67428364 67428401 -27844250 + AT_rich Low_complexity Low_complexity 1 37 0 5 1099 4829 172 71 14 chr17 67429091 67430395 -27842256 + L1_Mur3 LINE L1 307 1690 -4190 5 1099 936 177 45 15 chr17 67430393 67430429 -27842222 + L1_Mur3 LINE L1 4238 4273 -1607 5 1099 218 29 59 0 chr17 67430429 67430463 -27842188 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 5 1099 936 177 45 15 chr17 67430463 67430627 -27842024 + L1_Mur3 LINE L1 4274 4442 -1438 5 1099 2552 253 38 14 chr17 67430638 67431298 -27841353 + Lx6 LINE L1 6608 7283 -177 5 1099 321 89 0 0 chr17 67431314 67431359 -27841292 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 5 1099 255 31 0 0 chr17 67431360 67431392 -27841259 + (TGAG)n Simple_repeat Simple_repeat 3 34 0 5 1099 303 225 0 81 chr17 67431487 67431574 -27841077 + PB1 SINE Alu 27 106 -21 5 1099 374 266 107 60 chr17 67431847 67432015 -27840636 - B3 SINE B2 -3 213 38 5 1099 23 78 0 0 chr17 67432320 67432371 -27840280 + AT_rich Low_complexity Low_complexity 1 51 0 5 1099 181 0 0 65 chr17 67432375 67432406 -27840245 + (TAAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1099 198 0 0 0 chr17 67432616 67432638 -27840013 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1099 980 274 22 22 chr17 67433741 67434062 -27838589 + MER58B DNA MER1_type 4 324 -17 5 1099 1438 198 52 89 chr17 67434504 67434935 -27837716 - MTC LTR MaLR -21 400 1 5 1099 611 282 69 16 chr17 67434935 67435180 -27837471 - MTD LTR MaLR -161 258 1 5 1099 1436 212 57 107 chr17 67435220 67435659 -27836992 - MTD LTR MaLR 0 419 3 5 1099 397 294 31 16 chr17 67435659 67435787 -27836864 - B4A SINE B4 -1 291 162 5 1099 454 343 11 58 chr17 67436060 67436249 -27836402 - MER82 DNA MER2_type -6 647 468 5 1099 242 308 66 0 chr17 67436287 67436378 -27836273 - MER82 DNA MER2_type -343 310 214 5 1099 526 237 22 112 chr17 67436646 67436869 -27835782 + MER2 DNA MER2_type 127 329 -16 5 1099 576 235 85 57 chr17 67437436 67437612 -27835039 + B3A SINE B2 2 182 -16 5 1099 519 348 0 6 chr17 67437618 67437797 -27834854 + (CA)n Simple_repeat Simple_repeat 1 178 0 5 1099 225 209 23 0 chr17 67438011 67438054 -27834597 + B1F1 SINE Alu 11 54 -95 5 1099 744 115 0 0 chr17 67438365 67438478 -27834173 + (TG)n Simple_repeat Simple_repeat 2 114 0 5 1099 424 306 33 8 chr17 67440775 67440897 -27831754 + RSINE1 SINE B4 13 137 -28 5 1099 249 209 0 0 chr17 67440910 67440977 -27831674 + CT-rich Low_complexity Low_complexity 1 67 0 5 1099 462 167 0 0 chr17 67440976 67441084 -27831567 + (CA)n Simple_repeat Simple_repeat 1 108 0 5 1099 215 275 25 12 chr17 67441485 67441566 -27831085 + ID4_ SINE ID 2 83 0 5 1099 338 259 24 0 chr17 67442639 67442724 -27829927 + MLT1A LTR MaLR 56 142 -223 5 1099 355 248 37 19 chr17 67442732 67442839 -27829812 + MLT1A LTR MaLR 263 371 -3 5 1099 450 243 94 7 chr17 67443091 67443240 -27829411 + Lx6 LINE L1 7299 7460 0 5 1099 1119 67 0 0 chr17 67443465 67443614 -27829037 + (TC)n Simple_repeat Simple_repeat 2 150 0 5 1099 709 229 69 30 chr17 67444312 67444515 -27828136 - B3 SINE B2 0 216 6 5 1099 207 0 0 0 chr17 67444732 67444755 -27827896 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1099 394 287 8 25 chr17 67445182 67445300 -27827351 - PB1D10 SINE Alu -1 116 1 5 1099 286 356 52 16 chr17 67445462 67445653 -27826998 - MER3 DNA MER1_type -10 199 2 5 1099 207 170 10 87 chr17 67445818 67445921 -27826730 + (TTATA)n Simple_repeat Simple_repeat 1 95 0 5 1099 378 274 0 10 chr17 67446324 67446427 -27826224 + PB1 SINE Alu 5 106 -21 5 1099 658 145 37 16 chr17 67446474 67446798 -27825853 + (TG)n Simple_repeat Simple_repeat 1 331 0 5 1099 736 131 48 7 chr17 67446868 67447168 -27825483 + (TG)n Simple_repeat Simple_repeat 1 312 0 5 1099 396 0 0 0 chr17 67447741 67447785 -27824866 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1099 272 299 96 12 chr17 67450482 67450648 -27822003 - MER2 DNA MER2_type -75 270 91 5 1099 270 0 0 0 chr17 67451903 67451933 -27820718 + (TC)n Simple_repeat Simple_repeat 2 31 0 5 1099 225 0 0 0 chr17 67451933 67451957 -27820694 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 1099 300 202 8 48 chr17 67453191 67453316 -27819335 + C-rich Low_complexity Low_complexity 3 122 0 5 1099 709 129 35 17 chr17 67453300 67453473 -27819178 + CT-rich Low_complexity Low_complexity 4 179 0 5 1099 230 123 45 30 chr17 67453497 67453564 -27819087 + CT-rich Low_complexity Low_complexity 3 70 0 5 1099 592 268 0 0 chr17 67453901 67454028 -27818623 + ID_B1 SINE B4 87 213 -11 5 1099 1141 138 98 51 chr17 67454764 67454978 -27817673 + URR1A DNA MER1_type 1 224 -2 5 1099 588 251 72 52 chr17 67455296 67455489 -27817162 + B3A SINE B2 2 198 0 5 1099 348 246 16 49 chr17 67457674 67457788 -27814863 - PB1D10 SINE Alu 0 117 10 5 1099 309 26 0 0 chr17 67458573 67458611 -27814040 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1099 440 117 0 13 chr17 67460999 67461077 -27811574 + (TG)n Simple_repeat Simple_repeat 2 78 0 5 1099 183 42 0 0 chr17 67461131 67461155 -27811496 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 5 1099 279 335 6 40 chr17 67461442 67461616 -27811035 + (CA)n Simple_repeat Simple_repeat 1 168 0 5 1099 227 257 5 114 chr17 67461629 67461831 -27810820 + (CATG)n Simple_repeat Simple_repeat 1 180 0 5 1099 320 335 0 49 chr17 67461769 67462048 -27810603 + (CA)n Simple_repeat Simple_repeat 1 265 0 5 1099 430 331 102 51 chr17 67462851 67463243 -27809408 + Charlie4a DNA MER1_type 85 496 -12 5 1099 762 11 0 0 chr17 67464155 67464242 -27808409 + (TTC)n Simple_repeat Simple_repeat 2 88 0 5 1099 722 223 96 30 chr17 67464931 67465130 -27807521 + B3 SINE B2 5 216 0 5 1099 280 186 107 74 chr17 67465834 67465956 -27806695 - Lx9 LINE L1 -1 7643 7518 5 1099 530 324 78 4 chr17 67468534 67468779 -27803872 + MER2 DNA MER2_type 6 268 -77 5 1099 264 91 0 0 chr17 67469062 67469106 -27803545 + (TC)n Simple_repeat Simple_repeat 2 45 0 5 1099 267 227 40 0 chr17 67470214 67470289 -27802362 - ID SINE ID -144 80 3 5 1099 1092 252 53 53 chr17 67470728 67471105 -27801546 + MTEa LTR MaLR 1 377 -2 5 1099 993 80 0 0 chr17 67471461 67471591 -27801060 + B1_Mus1 SINE Alu 10 139 -9 5 1099 240 35 0 0 chr17 67471591 67471620 -27801031 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 5 1099 313 371 17 0 chr17 67472061 67472177 -27800474 + RSINE1 SINE B4 38 155 -10 5 1099 437 122 14 0 chr17 67473436 67473510 -27799141 + (GAGAA)n Simple_repeat Simple_repeat 5 79 0 5 1099 635 158 0 40 chr17 67473931 67474056 -27798595 + Lx LINE L1 6531 6650 -4 5 1099 405 0 0 0 chr17 67474626 67474671 -27797980 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1099 415 333 72 12 chr17 67474735 67474902 -27797749 + B4 SINE B4 84 260 -32 5 1099 270 0 0 0 chr17 67474985 67475015 -27797636 + (GA)n Simple_repeat Simple_repeat 2 31 0 5 1099 198 0 0 0 chr17 67475293 67475315 -27797336 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1099 231 304 86 29 chr17 67476130 67476269 -27796382 + MLT1K LTR MaLR 323 469 -126 5 1099 399 41 0 0 chr17 67480348 67480397 -27792254 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1099 481 260 157 17 chr17 67481494 67481535 -27791116 - B3A SINE B2 0 198 160 5 1099 270 0 0 0 chr17 67481535 67481565 -27791086 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 1099 481 260 157 17 chr17 67481565 67481695 -27790956 - B3A SINE B2 -39 159 3 5 1099 438 36 0 0 chr17 67483580 67483636 -27789015 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 1099 315 0 0 0 chr17 67483636 67483670 -27788981 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1099 375 278 37 0 chr17 67483882 67483990 -27788661 + PB1D10 SINE Alu 1 112 -5 5 1099 206 216 0 0 chr17 67483998 67484035 -27788616 + polypurine Low_complexity Low_complexity 1 37 0 5 1099 849 201 122 0 chr17 67484903 67485092 -27787559 - URR1A DNA MER1_type -14 212 1 5 1099 378 171 0 0 chr17 67485306 67485376 -27787275 + (TATG)n Simple_repeat Simple_repeat 4 73 0 5 1099 1064 129 0 11 chr17 67485438 67485618 -27787033 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 5 1099 456 19 0 0 chr17 67485618 67485671 -27786980 + (GGAA)n Simple_repeat Simple_repeat 1 53 0 5 1099 29 0 0 0 chr17 67487777 67487806 -27784845 + AT_rich Low_complexity Low_complexity 1 29 0 5 1099 314 311 125 7 chr17 67488582 67488734 -27783917 + RCHARR1 DNA MER1_type 35 204 -770 5 1099 405 0 0 0 chr17 67488865 67488910 -27783741 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 1099 321 89 0 0 chr17 67488910 67488954 -27783697 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1099 402 315 15 8 chr17 67488958 67489089 -27783562 - RSINE1 SINE B4 -32 133 2 5 1099 1843 231 63 20 chr17 67489126 67489713 -27782938 + RCHARR1 DNA MER1_type 359 970 -4 5 1099 368 163 151 0 chr17 67490033 67490119 -27782532 + B3 SINE B2 111 209 -7 5 1099 484 248 0 17 chr17 67490513 67490628 -27782023 + ID_B1 SINE B4 110 222 -2 5 1099 461 17 0 17 chr17 67490896 67490955 -27781696 + (CAGA)n Simple_repeat Simple_repeat 3 60 0 5 1099 351 274 232 11 chr17 67491714 67491895 -27780756 + Tigger5 DNA MER2_type 2 222 -2184 5 1099 261 342 0 0 chr17 67492329 67492402 -27780249 + polypurine Low_complexity Low_complexity 4 76 0 5 1099 953 121 6 0 chr17 67492431 67492605 -27780046 + (TGGA)n Simple_repeat Simple_repeat 4 178 0 5 1099 618 198 19 0 chr17 67492616 67492826 -27779825 + (TGGA)n Simple_repeat Simple_repeat 1 214 0 5 1099 342 80 0 0 chr17 67492833 67492883 -27779768 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 5 1099 1716 138 79 13 chr17 67492943 67493258 -27779393 + ORR1B1 LTR MaLR 1 336 -58 5 1099 1459 22 0 0 chr17 67493274 67493457 -27779194 + ORR1A0 LTR MaLR 164 346 0 5 1099 1021 77 13 0 chr17 67493457 67493612 -27779039 + ORR1A0-int LTR MaLR 1 157 -1635 5 1099 422 110 24 0 chr17 67493613 67493695 -27778956 + (TCCA)n Simple_repeat Simple_repeat 1 84 0 5 1099 30766 112 16 5 chr17 67493710 67499514 -27773137 - L1_Mus2 LINE L1 -15 6551 675 5 1099 443 114 0 0 chr17 67499611 67499681 -27772970 + ORR1B1 LTR MaLR 325 394 0 5 1099 488 238 28 136 chr17 67500023 67500202 -27772449 + B3A SINE B2 2 161 -37 1 1099 428 0 19 0 chr17 67500202 67500254 -27772397 + (TC)n Simple_repeat Simple_repeat 1 53 0 2 1099 488 238 28 136 chr17 67500254 67500288 -27772363 + B3A SINE B2 162 192 -6 1 1099 728 298 21 49 chr17 67500881 67501167 -27771484 - B4 SINE B4 -14 278 1 3 1099 387 0 0 0 chr17 67501404 67501447 -27771204 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1099 342 0 0 0 chr17 67501447 67501484 -27771167 + (GA)n Simple_repeat Simple_repeat 2 39 0 5 1099 240 210 0 0 chr17 67501566 67501647 -27771004 + GA-rich Low_complexity Low_complexity 2 82 0 6 1100 2379 110 3 0 chr17 67502405 67502731 -27769920 + ORR1A2 LTR MaLR 1 327 0 7 1100 2248 109 19 12 chr17 67504789 67505113 -27767538 - ORR1A3 LTR MaLR 0 326 1 8 1100 260 255 20 39 chr17 67505440 67505542 -27767109 + MTEb LTR MaLR 278 377 -2 9 1100 249 301 19 46 chr17 67505922 67506030 -27766621 - ORR1E LTR MaLR -167 192 88 1 1100 734 276 192 6 chr17 67507294 67507637 -27765014 - MTD LTR MaLR -1 418 12 1 1100 477 355 98 35 chr17 67510534 67511074 -27761577 + Lx8 LINE L1 6896 7469 -4 1 1100 22 0 0 0 chr17 67511074 67511096 -27761555 + AT_rich Low_complexity Low_complexity 1 22 0 1 1100 353 175 5 145 chr17 67511096 67511310 -27761341 - RMER17C LTR ERVK -135 275 92 1 1100 335 232 155 0 chr17 67513021 67513176 -27759475 - Lx9 LINE L1 -47 7597 7419 1 1100 223 204 23 0 chr17 67513176 67513220 -27759431 + (CATATA)n Simple_repeat Simple_repeat 6 50 0 1 1100 241 346 30 59 chr17 67513221 67513356 -27759295 + MLT1D LTR MaLR 371 501 -4 1 1100 750 179 117 6 chr17 67515127 67515290 -27757361 - RLTR25A LTR ERVK -912 191 11 1 1100 451 123 55 0 chr17 67516142 67516215 -27756436 + B3A SINE B2 3 79 -119 1 1100 599 295 31 125 chr17 67516876 67517197 -27755454 + B4 SINE B4 2 292 0 2 1100 720 0 0 0 chr17 67517882 67517962 -27754689 + (GAA)n Simple_repeat Simple_repeat 3 82 0 2 1100 234 62 0 0 chr17 67517962 67517994 -27754657 + (CAG)n Simple_repeat Simple_repeat 1 32 0 2 1100 265 233 23 11 chr17 67518332 67518419 -27754232 + Charlie25 DNA MER1_type 119 206 -2318 2 1100 298 249 76 112 chr17 67518419 67518722 -27753929 + B4A SINE B4 1 292 0 2 1100 726 152 0 0 chr17 67521068 67521193 -27751458 + (TA)n Simple_repeat Simple_repeat 2 126 0 2 1100 207 0 0 0 chr17 67521193 67521216 -27751435 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 1100 252 0 0 0 chr17 67521245 67521273 -27751378 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 1100 298 314 126 65 chr17 67521368 67521630 -27751021 - MLT1B LTR MaLR -37 353 76 2 1100 360 0 0 0 chr17 67521921 67521961 -27750690 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1100 217 207 21 0 chr17 67522010 67522076 -27750575 - MIRc SINE MIR -118 150 78 2 1100 492 48 0 0 chr17 67522119 67522182 -27750469 + (CA)n Simple_repeat Simple_repeat 1 63 0 3 1100 2778 76 2 15 chr17 67522182 67522582 -27750069 + MTB LTR MaLR 1 395 -5 3 1100 432 0 0 0 chr17 67522582 67522630 -27750021 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1100 324 70 0 0 chr17 67524538 67524581 -27748070 + (TTTTC)n Simple_repeat Simple_repeat 1 43 0 3 1100 288 0 0 0 chr17 67525693 67525725 -27746926 + (A)n Simple_repeat Simple_repeat 1 32 0 3 1100 236 284 62 0 chr17 67526734 67526815 -27745836 + Charlie1b DNA MER1_type 7 92 -431 3 1100 579 258 43 137 chr17 67528121 67528332 -27744319 - B3A SINE B2 -1 192 2 3 1100 854 240 107 15 chr17 67528858 67529120 -27743531 + B4A SINE B4 1 286 -6 3 1100 212 294 0 19 chr17 67530760 67530812 -27741839 + ID SINE ID 39 89 -135 3 1100 362 251 0 2 chr17 67531586 67531680 -27740971 - MTE2a LTR MaLR 0 379 288 3 1100 4937 223 66 92 chr17 67531740 67533169 -27739482 + Lx9 LINE L1 6090 7478 -166 4 1100 351 0 0 0 chr17 67533169 67533208 -27739443 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1100 4937 223 66 92 chr17 67533208 67533374 -27739277 + Lx9 LINE L1 7479 7643 -1 4 1100 247 136 0 0 chr17 67533387 67533431 -27739220 + L1MB3 LINE L1 6133 6176 -7 4 1100 330 290 16 31 chr17 67534245 67534373 -27738278 + GA-rich Low_complexity Low_complexity 5 130 0 4 1100 829 176 4 22 chr17 67534386 67534614 -27738037 + GA-rich Low_complexity Low_complexity 1 223 0 4 1100 364 328 101 18 chr17 67535067 67535374 -27737277 - MER2 DNA MER2_type 0 336 3 4 1100 36 53 0 0 chr17 67536808 67536865 -27735786 + AT_rich Low_complexity Low_complexity 1 57 0 4 1100 377 295 9 35 chr17 67536945 67537061 -27735590 - B3 SINE B2 -103 113 1 4 1100 265 317 39 10 chr17 67537096 67537198 -27735453 + B1F SINE Alu 40 144 -5 4 1100 323 313 0 0 chr17 67537218 67537301 -27735350 + ID4 SINE ID 1 83 0 4 1100 479 297 104 9 chr17 67538208 67538439 -27734212 - MER58B DNA MER1_type -68 273 21 4 1100 291 113 0 0 chr17 67538666 67538719 -27733932 + (TC)n Simple_repeat Simple_repeat 1 53 0 5 1100 351 0 0 0 chr17 67538719 67538758 -27733893 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1100 438 220 19 29 chr17 67538802 67538905 -27733746 - RSINE1 SINE B4 -46 119 18 5 1100 23 33 0 0 chr17 67539723 67539753 -27732898 + AT_rich Low_complexity Low_complexity 1 30 0 5 1100 468 162 0 0 chr17 67540462 67540567 -27732084 + A-rich Low_complexity Low_complexity 1 105 0 5 1100 236 269 92 8 chr17 67541988 67542108 -27730543 - L3 LINE CR1 -321 4168 4039 5 1100 333 0 0 0 chr17 67542273 67542310 -27730341 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1100 221 282 0 27 chr17 67543742 67543815 -27728836 + B1_Mur1 SINE Alu 73 143 -6 5 1100 451 303 116 12 chr17 67544071 67544312 -27728339 - L4 LINE RTE -1194 835 570 5 1100 422 294 31 38 chr17 67544431 67544590 -27728061 + RSINE1 SINE B4 4 161 -4 5 1100 832 205 37 11 chr17 67544638 67544825 -27727826 + B3A SINE B2 7 198 0 6 1100 180 0 0 0 chr17 67545303 67545323 -27727328 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 6 1100 325 299 0 116 chr17 67545377 67545435 -27727216 + LTR41 LTR ERVL 27 70 -698 6 1100 1223 171 9 35 chr17 67545435 67545665 -27726986 + URR1B DNA MER1_type 2 225 0 6 1100 325 299 0 116 chr17 67545665 67545761 -27726890 + LTR41 LTR ERVL 71 163 -605 6 1100 23 0 0 0 chr17 67546642 67546665 -27725986 + AT_rich Low_complexity Low_complexity 1 23 0 6 1100 277 266 115 0 chr17 67547687 67547800 -27724851 + MER5A DNA MER1_type 61 186 -3 6 1100 300 253 12 12 chr17 67547962 67548042 -27724609 + ID2 SINE ID 2 81 -2 6 1100 254 29 29 0 chr17 67551326 67551361 -27721290 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 1100 201 94 0 59 chr17 67551365 67551399 -27721252 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 6 1100 244 239 29 29 chr17 67554254 67554323 -27718328 + ID4 SINE ID 2 70 -13 6 1100 234 271 43 0 chr17 67554631 67554701 -27717950 + ID4_ SINE ID 5 77 -6 7 1100 624 27 0 0 chr17 67554871 67554945 -27717706 + (GGGAGA)n Simple_repeat Simple_repeat 5 78 0 7 1100 866 166 6 0 chr17 67555487 67555662 -27716989 + CT-rich Low_complexity Low_complexity 2 177 0 7 1100 605 173 8 0 chr17 67555691 67555818 -27716833 + CT-rich Low_complexity Low_complexity 3 130 0 7 1100 337 286 143 25 chr17 67555848 67556102 -27716549 - B4A SINE B4 -2 290 6 7 1100 228 294 42 32 chr17 67556108 67556203 -27716448 - L1M2 LINE L1 -513 5778 5683 7 1100 551 268 72 58 chr17 67556256 67556533 -27716118 - L1M2 LINE L1 -492 5682 5402 7 1100 28 61 0 0 chr17 67558944 67558993 -27713658 + AT_rich Low_complexity Low_complexity 1 49 0 7 1100 661 207 200 6 chr17 67558998 67559173 -27713478 - B3 SINE B2 -5 211 3 7 1100 197 302 23 92 chr17 67561797 67561928 -27710723 - MIRc SINE MIR -45 223 102 7 1100 265 236 56 0 chr17 67562223 67562295 -27710356 - PB1 SINE Alu -51 76 1 7 1100 414 0 0 0 chr17 67562713 67562759 -27709892 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 1100 29 28 0 0 chr17 67564185 67564221 -27708430 + AT_rich Low_complexity Low_complexity 1 36 0 8 1100 558 108 0 0 chr17 67564608 67564691 -27707960 + (CATA)n Simple_repeat Simple_repeat 2 84 0 8 1100 423 0 0 0 chr17 67564691 67564738 -27707913 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 1100 1808 126 102 33 chr17 67564752 67565113 -27707538 + ORR1B1 LTR MaLR 1 386 -8 8 1100 405 0 0 0 chr17 67565308 67565353 -27707298 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 1100 257 295 18 45 chr17 67565874 67565984 -27706667 + PB1D10 SINE Alu 3 109 -8 8 1100 2452 62 6 59 chr17 67566017 67566358 -27706293 - ORR1A2 LTR MaLR 0 327 5 8 1100 205 171 0 0 chr17 67567165 67567206 -27705445 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 8 1100 2249 91 65 0 chr17 67568578 67568885 -27703766 - ORR1A2 LTR MaLR 0 327 1 8 1100 958 284 29 6 chr17 67568885 67569197 -27703454 - RMER15 LTR ERVL -40 535 217 8 1100 256 230 0 47 chr17 67569471 67569535 -27703116 - RMER15 LTR ERVL -510 65 5 8 1100 338 138 0 0 chr17 67569787 67569845 -27702806 + HAL1-2a_MD LINE L1 2348 2405 -619 9 1100 1125 205 9 0 chr17 67570263 67570473 -27702178 + B3 SINE B2 1 212 -4 9 1100 373 329 40 7 chr17 67570642 67570792 -27701859 - RSINE1 SINE B4 -9 156 2 9 1100 186 133 0 0 chr17 67571425 67571455 -27701196 + (TC)n Simple_repeat Simple_repeat 2 31 0 9 1100 495 195 62 0 chr17 67571523 67571636 -27701015 + B3A SINE B2 23 142 -56 9 1100 368 20 20 0 chr17 67571675 67571724 -27700927 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 1100 1071 139 25 25 chr17 67571868 67572067 -27700584 + Lx2B LINE L1 6801 6999 -1 9 1100 23 33 0 0 chr17 67572925 67572955 -27699696 + AT_rich Low_complexity Low_complexity 1 30 0 9 1100 667 258 138 55 chr17 67573033 67573603 -27699048 + L1MB5 LINE L1 5300 5920 -254 9 1100 288 0 0 0 chr17 67573850 67573882 -27698769 + (TG)n Simple_repeat Simple_repeat 1 32 0 9 1100 291 263 82 103 chr17 67574022 67574173 -27698478 - B2_Mm2 SINE B2 -4 191 37 1 1100 405 58 0 0 chr17 67574173 67574225 -27698426 + (CAT)n Simple_repeat Simple_repeat 1 52 0 1 1100 291 263 82 103 chr17 67574225 67574268 -27698383 - B2_Mm2 SINE B2 -159 36 1 1 1100 189 0 0 0 chr17 67574295 67574316 -27698335 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1 1100 310 335 12 0 chr17 67574621 67574782 -27697869 + L1MC2 LINE L1 5817 5979 -365 1 1100 356 159 14 14 chr17 67574792 67574862 -27697789 - HAL1-3A_ME LINE L1 -811 2047 1978 1 1100 364 70 56 0 chr17 67574862 67574933 -27697718 + (TCTG)n Simple_repeat Simple_repeat 1 75 0 1 1100 399 0 0 0 chr17 67574933 67574980 -27697671 - HAL1-3A_ME LINE L1 -836 2022 1976 1 1100 716 103 48 0 chr17 67574981 67575146 -27697505 + (TCTG)n Simple_repeat Simple_repeat 2 174 0 1 1100 234 296 88 39 chr17 67575147 67575249 -27697402 - RSINE1 SINE B4 -4 161 55 1 1100 228 35 0 0 chr17 67575299 67575328 -27697323 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1100 308 253 4 58 chr17 67575331 67575443 -27697208 - B1F SINE Alu 0 120 13 1 1100 252 326 14 50 chr17 67575967 67576106 -27696545 - L1M5 LINE L1 -1989 4157 4024 1 1100 229 173 0 55 chr17 67577344 67577399 -27695252 + (CACCC)n Simple_repeat Simple_repeat 5 56 0 1 1100 3227 194 10 15 chr17 67577895 67578152 -27694499 - Lx9 LINE L1 -712 6932 6676 1 1100 1759 152 68 46 chr17 67578152 67578503 -27694148 + RLTR15 LTR ERVK 1 359 0 1 1100 3227 194 10 15 chr17 67578503 67578863 -27693788 - Lx9 LINE L1 -969 6675 6318 1 1100 258 190 0 0 chr17 67578868 67578926 -27693725 + Lx9 LINE L1 7587 7644 0 1 1100 521 205 8 0 chr17 67579020 67579147 -27693504 + GA-rich Low_complexity Low_complexity 3 130 0 1 1100 3668 134 49 35 chr17 67579153 67579909 -27692742 + RMER17A LTR ERVK 1 751 0 1 1100 392 97 16 0 chr17 67579909 67579971 -27692680 + (GAA)n Simple_repeat Simple_repeat 1 63 0 1 1100 209 269 19 0 chr17 67580236 67580288 -27692363 + GA-rich Low_complexity Low_complexity 3 55 0 1 1100 279 0 0 0 chr17 67580472 67580503 -27692148 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1100 344 256 18 8 chr17 67581323 67581434 -27691217 + B1_Mur1 SINE Alu 9 145 -4 1 1100 429 291 147 33 chr17 67582101 67582346 -27690305 + B4A SINE B4 1 273 -19 1 1100 206 62 31 0 chr17 67582395 67582427 -27690224 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1100 769 279 70 51 chr17 67583549 67583681 -27688970 - L1M2 LINE L1 -1003 5140 5005 1 1100 3551 23 0 0 chr17 67583681 67584077 -27688574 + MTA_Mm LTR MaLR 1 396 0 1 1100 769 279 70 51 chr17 67584077 67584314 -27688337 - L1M2 LINE L1 -1139 5004 4764 1 1100 323 155 12 0 chr17 67584494 67584578 -27688073 + (TA)n Simple_repeat Simple_repeat 2 86 0 1 1100 301 236 0 53 chr17 67584799 67584875 -27687776 + L1MA6 LINE L1 6056 6127 -173 1 1100 2263 171 12 28 chr17 67585923 67586349 -27686302 - MTC LTR MaLR -2 419 1 1 1100 1285 111 11 6 chr17 67586430 67586612 -27686039 + B2_Mm2 SINE B2 4 186 -9 1 1100 391 322 45 19 chr17 67588382 67588537 -27684114 + RSINE1 SINE B4 3 161 -4 1 1100 224 273 10 0 chr17 67588542 67588641 -27684010 + (TA)n Simple_repeat Simple_repeat 2 101 0 1 1100 396 0 0 0 chr17 67588693 67588737 -27683914 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 1100 248 330 28 0 chr17 67588886 67588995 -27683656 + MIRb SINE MIR 41 152 -116 1 1100 510 61 0 0 chr17 67589083 67589149 -27683502 + (TCCC)n Simple_repeat Simple_repeat 3 68 0 1 1100 841 293 66 68 chr17 67589201 67589567 -27683084 - MTE2a LTR MaLR -9 370 6 1 1100 214 341 57 0 chr17 67589811 67589899 -27682752 + MIRb SINE MIR 1 93 -175 1 1100 340 225 21 53 chr17 67590848 67590942 -27681709 + ID_B1 SINE B4 121 211 -13 1 1100 234 0 0 0 chr17 67590942 67590968 -27681683 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 1 1100 408 20 0 0 chr17 67591204 67591253 -27681398 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1100 471 35 0 0 chr17 67591347 67591404 -27681247 + (GA)n Simple_repeat Simple_repeat 1 57 0 1 1100 225 0 0 0 chr17 67592417 67592442 -27680209 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1100 23 0 0 0 chr17 67592480 67592503 -27680148 + AT_rich Low_complexity Low_complexity 1 23 0 1 1100 23 33 0 0 chr17 67593071 67593101 -27679550 + AT_rich Low_complexity Low_complexity 1 30 0 1 1100 228 246 0 0 chr17 67593118 67593187 -27679464 + (TA)n Simple_repeat Simple_repeat 1 69 0 1 1100 534 251 0 0 chr17 67593588 67593767 -27678884 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 1100 542 227 12 0 chr17 67593727 67593899 -27678752 + (CATA)n Simple_repeat Simple_repeat 3 176 0 1 1100 300 176 0 0 chr17 67593900 67593951 -27678700 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1100 207 0 0 0 chr17 67594415 67594438 -27678213 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1100 496 324 48 39 chr17 67595303 67595534 -27677117 + MER2 DNA MER2_type 113 345 0 1 1100 694 78 82 0 chr17 67597776 67598204 -27674447 + CT-rich Low_complexity Low_complexity 1 463 0 1 1100 1176 99 0 0 chr17 67599500 67599779 -27672872 + (CA)n Simple_repeat Simple_repeat 1 279 0 1 1100 405 0 0 0 chr17 67599781 67599826 -27672825 + (CACG)n Simple_repeat Simple_repeat 1 45 0 1 1100 436 288 45 0 chr17 67600744 67600876 -27671775 + B1F1 SINE Alu 4 141 -8 1 1100 285 239 0 0 chr17 67601066 67601183 -27671468 + (CA)n Simple_repeat Simple_repeat 2 118 0 1 1100 343 98 0 62 chr17 67601185 67601250 -27671401 + HAL1-3A_ME LINE L1 1975 2035 -823 1 1100 456 217 208 0 chr17 67601754 67601874 -27670777 + B1_Mur1 SINE Alu 5 149 0 1 1100 548 351 41 52 chr17 67601881 67602151 -27670500 + B4A SINE B4 4 270 -22 1 1100 22 35 0 0 chr17 67602707 67602736 -27669915 + AT_rich Low_complexity Low_complexity 1 29 0 1 1100 2707 220 59 73 chr17 67602924 67603709 -27668942 - RLTR40 LTR ERVK -29 788 15 1 1100 988 192 189 0 chr17 67604003 67604260 -27668391 - MTD LTR MaLR -16 403 108 1 1100 239 211 0 0 chr17 67604278 67604335 -27668316 - MTD LTR MaLR -364 57 1 1 1100 195 0 0 79 chr17 67604369 67604407 -27668244 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1 1100 324 0 0 0 chr17 67605333 67605369 -27667282 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1100 405 39 0 0 chr17 67607502 67607553 -27665098 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1100 439 262 243 11 chr17 67607957 67608146 -27664505 - Lx8 LINE L1 -127 7346 7114 1 1100 301 314 10 19 chr17 67608264 67608368 -27664283 + B4A SINE B4 5 107 -185 1 1100 224 224 0 20 chr17 67608478 67608528 -27664123 + (CATG)n Simple_repeat Simple_repeat 2 50 0 1 1100 900 295 89 51 chr17 67609985 67610514 -27662137 + L1MA5 LINE L1 5478 6026 -274 1 1100 837 200 2 2 chr17 67611117 67611662 -27660989 + (CA)n Simple_repeat Simple_repeat 1 545 0 1 1100 264 250 72 14 chr17 67612855 67612924 -27659727 + ID2 SINE ID 2 74 -9 1 1100 308 209 11 0 chr17 67612931 67613022 -27659629 + (ATG)n Simple_repeat Simple_repeat 2 93 0 1 1100 310 304 75 6 chr17 67614520 67614679 -27657972 + MER33 DNA MER1_type 41 210 -114 1 1100 830 110 6 70 chr17 67614757 67614913 -27657738 - URR1A DNA MER1_type 0 226 81 1 1100 2469 62 10 3 chr17 67615198 67615507 -27657144 + RLTR10E LTR ERVK 1 311 0 1 1100 262 262 157 9 chr17 67615888 67615996 -27656655 + MTE2a LTR MaLR 14 137 -242 1 1100 742 312 118 10 chr17 67615943 67616348 -27656303 + MT2A LTR ERVL 85 533 0 1 1100 183 80 0 0 chr17 67616587 67616612 -27656039 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 1 1100 193 257 71 0 chr17 67616616 67616686 -27655965 - L2a LINE L2 -17 3409 3335 1 1100 24 0 0 0 chr17 67618942 67618966 -27653685 + AT_rich Low_complexity Low_complexity 1 24 0 1 1100 501 88 0 2 chr17 67620387 67620475 -27652176 - MT2C_Mm LTR ERVL -90 403 299 1 1100 198 0 0 0 chr17 67620476 67620498 -27652153 + (GA)n Simple_repeat Simple_repeat 1 22 0 1 1100 360 0 0 0 chr17 67620588 67620628 -27652023 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 1100 725 190 6 0 chr17 67620628 67620802 -27651849 + (CA)n Simple_repeat Simple_repeat 2 176 0 1 1100 391 318 109 46 chr17 67621024 67621419 -27651232 + L2 LINE L2 2339 2758 -661 1 1100 285 352 109 12 chr17 67621551 67621807 -27650844 + MLT1G1 LTR MaLR 113 393 -186 1 1100 262 266 0 0 chr17 67622304 67622368 -27650283 - B4A SINE B4 -225 67 4 1 1100 285 75 0 0 chr17 67622674 67622714 -27649937 + (CAGA)n Simple_repeat Simple_repeat 1 40 0 1 1100 254 237 17 0 chr17 67622812 67622871 -27649780 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 1100 596 257 14 108 chr17 67622932 67623146 -27649505 - B3A SINE B2 -3 195 2 1 1100 909 180 202 0 chr17 67623244 67623422 -27649229 + B3 SINE B2 3 216 0 1 1100 27 0 0 0 chr17 67624768 67624795 -27647856 + AT_rich Low_complexity Low_complexity 1 27 0 1 1100 231 309 48 0 chr17 67624944 67625028 -27647623 - L1MC2 LINE L1 -104 6240 6153 1 1100 201 237 0 0 chr17 67625343 67625402 -27647249 + GA-rich Low_complexity Low_complexity 2 60 0 1 1100 237 132 0 0 chr17 67625402 67625440 -27647211 + (ATG)n Simple_repeat Simple_repeat 2 39 0 1 1100 533 223 0 9 chr17 67626249 67626362 -27646289 + B1_Mur1 SINE Alu 25 136 -13 1 1100 200 244 0 0 chr17 67626363 67626404 -27646247 + (TAA)n Simple_repeat Simple_repeat 1 41 0 1 1100 270 223 70 129 chr17 67626883 67627086 -27645565 - MER57D LTR ERV1 0 434 245 1 1100 440 273 69 62 chr17 67627184 67627286 -27645365 + B3A SINE B2 7 112 -86 1 1100 895 173 178 0 chr17 67627286 67627477 -27645174 - URR1B DNA MER1_type 0 225 1 1 1100 440 273 69 62 chr17 67627477 67627534 -27645117 + B3A SINE B2 113 167 -31 1 1100 426 114 0 0 chr17 67627538 67627617 -27645034 + (TC)n Simple_repeat Simple_repeat 1 79 0 1 1100 757 236 209 40 chr17 67628647 67628971 -27643680 - MTE2b LTR MaLR 0 379 1 1 1100 2999 126 65 25 chr17 67629243 67629798 -27642853 + RLTR20B3 LTR ERVK 1 577 0 2 137 802 262 117 120 chr17 67632961 67633576 -27639075 - RLTR18 LTR ERVK 0 616 4 2 1101 1036 306 79 30 chr17 67634456 67634988 -27637663 + Lx8 LINE L1 6915 7472 -1 2 1101 489 34 0 0 chr17 67636601 67636660 -27635991 + (TG)n Simple_repeat Simple_repeat 1 59 0 2 1101 394 250 189 30 chr17 67637165 67637297 -27635354 + B3A SINE B2 2 154 -44 2 1101 459 0 0 0 chr17 67637315 67637366 -27635285 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 1101 360 143 0 0 chr17 67639861 67639945 -27632706 + (C)n Simple_repeat Simple_repeat 1 84 0 2 1101 215 200 0 0 chr17 67640861 67640901 -27631750 + GA-rich Low_complexity Low_complexity 1 40 0 2 1101 463 301 16 0 chr17 67640909 67641032 -27631619 - MTE2b LTR MaLR -254 125 1 2 1101 324 0 0 0 chr17 67642179 67642215 -27630436 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2 1101 571 200 0 62 chr17 67642702 67642878 -27629773 + Lx2B LINE L1 6816 6980 -20 2 1101 224 209 0 0 chr17 67642962 67643005 -27629646 + (CATA)n Simple_repeat Simple_repeat 2 44 0 2 1101 201 129 0 0 chr17 67643057 67643088 -27629563 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1101 242 232 121 33 chr17 67643711 67643847 -27628804 + MIRc SINE MIR 76 221 -47 2 1101 632 282 7 0 chr17 67644233 67644382 -27628269 + B3A SINE B2 3 152 -46 2 1101 641 253 79 58 chr17 67644966 67645155 -27627496 - B3A SINE B2 -5 193 1 2 1101 25 0 0 0 chr17 67645188 67645213 -27627438 + AT_rich Low_complexity Low_complexity 1 25 0 2 1101 894 256 10 10 chr17 67645213 67645422 -27627229 + B3 SINE B2 1 209 -7 2 1101 447 270 211 0 chr17 67645447 67645651 -27627000 - Lx9 LINE L1 -23 7621 7375 2 1101 441 0 0 0 chr17 67645803 67645852 -27626799 + (TCTA)n Simple_repeat Simple_repeat 3 51 0 2 1101 247 291 18 55 chr17 67647987 67648096 -27624555 - MIR SINE MIR -97 165 61 2 1101 462 167 0 0 chr17 67648322 67648406 -27624245 + A-rich Low_complexity Low_complexity 1 84 0 2 1101 564 267 0 0 chr17 67649171 67649351 -27623300 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 1101 261 155 83 33 chr17 67649782 67649842 -27622809 + L1MC1 LINE L1 6261 6323 -10 2 1101 498 243 172 5 chr17 67650775 67650964 -27621687 + B4A SINE B4 10 230 -62 2 1101 635 272 104 0 chr17 67650964 67651137 -27621514 + B3 SINE B2 1 191 -25 2 1101 868 102 0 13 chr17 67651139 67651288 -27621363 + (TA)n Simple_repeat Simple_repeat 2 148 0 2 1101 22 56 0 0 chr17 67651301 67651337 -27621314 + AT_rich Low_complexity Low_complexity 1 36 0 2 1101 235 299 0 56 chr17 67651342 67651413 -27621238 + B4A SINE B4 224 290 -2 2 1101 234 91 0 0 chr17 67652979 67653012 -27619639 + (CGGGGG)n Simple_repeat Simple_repeat 4 36 0 2 1101 232 194 274 0 chr17 67653448 67653510 -27619141 + ID4_ SINE ID 3 81 -2 2 1101 491 221 0 8 chr17 67653902 67654030 -27618621 + (CA)n Simple_repeat Simple_repeat 2 128 0 2 1101 198 0 0 0 chr17 67654535 67654557 -27618094 + (TG)n Simple_repeat Simple_repeat 2 23 0 2 1101 679 240 13 0 chr17 67654569 67654719 -27617932 - B3A SINE B2 -42 156 5 2 1101 237 159 0 0 chr17 67655733 67655777 -27616874 + T-rich Low_complexity Low_complexity 1 44 0 2 1101 383 216 12 82 chr17 67656418 67656542 -27616109 + B3A SINE B2 81 215 -1 2 1101 846 251 67 22 chr17 67656827 67657096 -27615555 + B4A SINE B4 2 282 -10 2 1101 221 167 0 18 chr17 67657334 67657389 -27615262 + (TTA)n Simple_repeat Simple_repeat 3 56 0 2 1101 517 244 17 0 chr17 67657520 67657635 -27615016 + PB1D10 SINE Alu 1 117 0 2 1101 243 0 0 0 chr17 67657711 67657738 -27614913 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1101 1220 147 36 9 chr17 67659636 67659855 -27612796 - URR1B DNA MER1_type 0 225 1 2 1101 691 212 37 18 chr17 67659880 67659969 -27612682 + B4 SINE B4 1 92 -200 2 1101 272 272 96 10 chr17 67659969 67660073 -27612578 + PB1D7 SINE Alu 3 115 -5 2 1101 225 0 0 0 chr17 67660164 67660189 -27612462 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 1101 402 21 0 0 chr17 67660189 67660235 -27612416 + (TC)n Simple_repeat Simple_repeat 1 47 0 2 1101 207 0 0 0 chr17 67660235 67660257 -27612394 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 1101 195 146 0 0 chr17 67660302 67660343 -27612308 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 2 1101 576 77 0 0 chr17 67660732 67660810 -27611841 + (GGGAGA)n Simple_repeat Simple_repeat 2 79 0 2 1101 686 267 43 55 chr17 67661311 67661565 -27611086 + B4A SINE B4 42 292 0 2 1101 1091 125 16 5 chr17 67662202 67662387 -27610264 + B2_Mm2 SINE B2 7 193 -2 2 1101 751 223 102 6 chr17 67662403 67662570 -27610081 + B3 SINE B2 27 209 -7 2 1101 1365 88 5 5 chr17 67663042 67663226 -27609425 - B2_Mm2 SINE B2 -8 187 4 2 1101 194 62 0 30 chr17 67663610 67663643 -27609008 + (TTTC)n Simple_repeat Simple_repeat 2 33 0 2 1101 236 220 33 17 chr17 67664057 67664117 -27608534 + LSU-rRNA_Hsa rRNA rRNA 4208 4268 -767 2 1101 492 244 0 0 chr17 67664674 67664854 -27607797 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1101 245 264 9 0 chr17 67664874 67664984 -27607667 + (TG)n Simple_repeat Simple_repeat 2 112 0 2 1101 346 288 13 51 chr17 67665065 67665264 -27607387 - B4A SINE B4 -61 231 1 2 1101 23 54 0 0 chr17 67665347 67665384 -27607267 + AT_rich Low_complexity Low_complexity 1 37 0 2 1101 267 31 0 0 chr17 67665741 67665773 -27606878 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1101 627 258 72 21 chr17 67666118 67666312 -27606339 + ID_B1 SINE B4 1 204 -20 2 1101 220 191 0 0 chr17 67666324 67666371 -27606280 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 2 1101 269 290 67 59 chr17 67666371 67666630 -27606021 + MLT1E1A LTR MaLR 185 658 -22 2 1101 310 290 26 70 chr17 67668030 67668145 -27604506 - PB1D10 SINE Alu -22 126 16 2 1101 686 250 0 0 chr17 67669806 67669942 -27602709 - B1F1 SINE Alu -12 137 2 2 1101 258 81 0 0 chr17 67670526 67670563 -27602088 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 2 1101 332 248 120 28 chr17 67672500 67672608 -27600043 - B4A SINE B4 -173 119 2 2 1101 677 233 23 0 chr17 67674098 67674231 -27598420 - B1_Mur2 SINE Alu -1 148 13 2 1101 321 247 19 85 chr17 67674142 67674248 -27598403 - MT2B LTR ERVL -344 257 159 2 1101 309 231 87 96 chr17 67674558 67674637 -27598014 - B1_Mus2 SINE Alu -29 118 30 2 1101 6266 56 1 3 chr17 67674637 67675408 -27597243 + L1_Mus1 LINE L1 5798 6567 0 2 1101 309 231 87 96 chr17 67675408 67675443 -27597208 - B1_Mus2 SINE Alu -118 29 6 2 1101 330 241 146 81 chr17 67676015 67676200 -27596451 - MLT1A1 LTR MaLR -1 407 177 2 1101 229 195 0 0 chr17 67677198 67677239 -27595412 + C-rich Low_complexity Low_complexity 4 44 0 2 1101 707 276 51 75 chr17 67677795 67678089 -27594562 + B4A SINE B4 2 288 -4 2 1101 183 42 0 0 chr17 67679475 67679499 -27593152 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1101 231 344 140 54 chr17 67679915 67680250 -27592401 + Charlie2a DNA MER1_type 453 816 -2045 2 1101 185 59 0 56 chr17 67680391 67680427 -27592224 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 2 1101 548 312 77 39 chr17 67680519 67680746 -27591905 + B4A SINE B4 1 236 -56 2 1101 413 230 48 16 chr17 67680746 67680872 -27591779 + PB1D9 SINE Alu 2 128 -21 2 1101 219 333 62 62 chr17 67681078 67681174 -27591477 - RSINE1 SINE B4 -13 152 57 2 1101 966 294 129 42 chr17 67681358 67682019 -27590632 + Charlie2a DNA MER1_type 1275 1992 -869 2 1101 659 302 140 8 chr17 67682023 67682210 -27590441 + B4A SINE B4 6 226 -66 2 1101 240 35 0 0 chr17 67682210 67682239 -27590412 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1101 659 302 140 8 chr17 67682239 67682301 -27590350 + B4A SINE B4 227 288 -4 2 1101 695 206 0 6 chr17 67682305 67682486 -27590165 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 1101 353 177 0 12 chr17 67682523 67682603 -27590048 + (TA)n Simple_repeat Simple_repeat 1 79 0 2 1101 391 238 13 0 chr17 67682584 67682735 -27589916 + (CA)n Simple_repeat Simple_repeat 2 154 0 2 1101 428 245 6 0 chr17 67682795 67682954 -27589697 + (CA)n Simple_repeat Simple_repeat 1 160 0 2 1101 549 297 93 26 chr17 67683021 67683291 -27589360 + Charlie2a DNA MER1_type 1978 2265 -596 2 1101 765 291 86 48 chr17 67683303 67683780 -27588871 + Charlie2a DNA MER1_type 2324 2818 -43 2 1101 843 201 0 0 chr17 67684634 67684813 -27587838 + (TG)n Simple_repeat Simple_repeat 1 179 0 2 1101 328 281 66 0 chr17 67685500 67685621 -27587030 - L1M4b LINE L1 -4994 2340 2212 2 1101 32 26 0 0 chr17 67685685 67685724 -27586927 + AT_rich Low_complexity Low_complexity 1 39 0 2 1101 491 128 8 64 chr17 67685890 67686015 -27586636 + C-rich Low_complexity Low_complexity 6 123 0 2 1101 384 245 18 6 chr17 67687310 67687474 -27585177 + (TATATG)n Simple_repeat Simple_repeat 4 169 0 2 1101 1155 289 3 33 chr17 67687499 67687800 -27584851 - B4 SINE B4 0 292 1 2 1101 1161 250 53 59 chr17 67687835 67688192 -27584459 + MTE2b LTR MaLR 10 364 -15 2 1101 186 43 0 0 chr17 67688193 67688216 -27584435 + (CAA)n Simple_repeat Simple_repeat 1 23 0 2 1101 1300 203 35 0 chr17 67689220 67689476 -27583175 + RMER6A LTR ERVK 491 755 -1 2 1101 276 343 29 57 chr17 67689814 67689919 -27582732 + ID_B1 SINE B4 115 216 -8 2 1101 1889 199 130 62 chr17 67691168 67691304 -27581347 + RMER15 LTR ERVL 25 185 -390 2 1101 270 0 0 0 chr17 67691304 67691334 -27581317 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 2 1101 1889 199 130 62 chr17 67691334 67691712 -27580939 + RMER15 LTR ERVL 186 574 -1 2 1101 186 288 17 17 chr17 67692133 67692193 -27580458 - MIR3 SINE MIR -19 189 130 2 1101 231 36 0 0 chr17 67692778 67692806 -27579845 + (CG)n Simple_repeat Simple_repeat 2 29 0 2 1101 625 262 12 42 chr17 67693604 67693771 -27578880 + RSINE1 SINE B4 4 165 0 2 1101 876 255 133 30 chr17 67694492 67694823 -27577828 + MTD LTR MaLR 53 417 -2 2 1101 723 86 0 0 chr17 67694969 67695086 -27577565 + (TCTCTG)n Simple_repeat Simple_repeat 1 117 0 2 1101 402 21 0 0 chr17 67695115 67695162 -27577489 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1101 784 286 111 8 chr17 67695162 67695405 -27577246 - B4 SINE B4 -23 269 2 3 1101 190 161 0 0 chr17 67695820 67695851 -27576800 - L2b LINE L2 -11 3364 3334 3 1101 367 296 115 36 chr17 67697940 67698105 -27574546 - MER5A DNA MER1_type -3 186 9 3 1101 603 165 0 0 chr17 67698453 67698562 -27574089 + CT-rich Low_complexity Low_complexity 1 109 0 3 1101 624 264 25 19 chr17 67699021 67699183 -27573468 + B3A SINE B2 1 163 -35 3 1101 26 0 0 0 chr17 67699375 67699401 -27573250 + AT_rich Low_complexity Low_complexity 1 26 0 3 1101 300 342 56 26 chr17 67699877 67700072 -27572579 - L1MD3 LINE L1 -22 7973 7773 3 1101 232 270 0 0 chr17 67700757 67700820 -27571831 - ID4 SINE ID -9 74 12 3 1101 267 103 0 0 chr17 67700844 67700883 -27571768 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 3 1101 26 30 0 0 chr17 67703380 67703413 -27569238 + GC_rich Low_complexity Low_complexity 1 33 0 3 1101 21 36 0 0 chr17 67703887 67703915 -27568736 + GC_rich Low_complexity Low_complexity 1 28 0 3 1101 384 22 0 0 chr17 67704553 67704598 -27568053 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 3 1101 28 0 0 0 chr17 67705393 67705421 -27567230 + AT_rich Low_complexity Low_complexity 1 28 0 3 1101 244 312 60 60 chr17 67705962 67706095 -27566556 - MamSINE1 SINE tRNA -49 241 109 3 1101 1132 106 0 11 chr17 67706235 67706416 -27566235 + (TTC)n Simple_repeat Simple_repeat 2 180 0 3 1101 239 133 22 0 chr17 67706432 67706477 -27566174 + CT-rich Low_complexity Low_complexity 5 50 0 3 1101 207 88 0 0 chr17 67706477 67706511 -27566140 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 1101 258 81 0 0 chr17 67706511 67706547 -27566104 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1101 491 256 86 26 chr17 67707134 67707227 -27565424 - RLTR20D LTR ERVK 0 568 477 3 1101 423 0 0 0 chr17 67707227 67707274 -27565377 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1101 588 269 99 34 chr17 67707274 67707583 -27565068 - RLTR20D LTR ERVK -88 490 3 3 1101 21 0 0 0 chr17 67707717 67707738 -27564913 + GC_rich Low_complexity Low_complexity 1 21 0 3 1101 377 214 11 33 chr17 67709198 67709290 -27563361 + MLT1A1 LTR MaLR 319 408 0 3 1101 22 70 0 0 chr17 67709354 67709397 -27563254 + AT_rich Low_complexity Low_complexity 1 43 0 3 1101 784 255 76 11 chr17 67710763 67711025 -27561626 - B4A SINE B4 -13 279 1 3 1101 393 224 91 10 chr17 67711623 67711722 -27560929 + PB1D10 SINE Alu 9 115 -2 3 1101 256 301 18 55 chr17 67711655 67711764 -27560887 + MT2B2 LTR ERVL 198 302 -282 3 1101 434 260 90 118 chr17 67712176 67712320 -27560331 - B1F1 SINE Alu -5 144 5 3 1101 303 305 52 10 chr17 67712236 67712332 -27560319 - MT2B2 LTR ERVL -332 252 153 3 1101 1173 229 36 119 chr17 67712392 67712665 -27559986 - ORR1E LTR MaLR 0 359 102 3 1101 958 41 0 0 chr17 67712665 67712788 -27559863 - L1Md_A LINE L1 0 6582 6460 3 1101 1173 229 36 119 chr17 67712788 67712901 -27559750 - ORR1E LTR MaLR -258 101 5 3 1101 414 0 0 0 chr17 67712921 67712967 -27559684 + (T)n Simple_repeat Simple_repeat 1 46 0 3 1101 909 263 74 107 chr17 67713087 67713479 -27559172 - MTEa LTR MaLR 0 379 1 3 1101 783 292 119 59 chr17 67715632 67716428 -27556223 + HAL1 LINE L1 1010 1853 -654 3 1101 676 268 184 32 chr17 67717113 67717460 -27555191 + MER89 LTR ERV1 3 402 -157 3 1101 282 193 0 0 chr17 67719317 67719374 -27553277 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1101 237 348 0 0 chr17 67719388 67719480 -27553171 + (CA)n Simple_repeat Simple_repeat 1 92 0 3 1101 2379 102 3 0 chr17 67719534 67719858 -27552793 - ORR1A2 LTR MaLR 0 327 3 3 1101 339 280 118 64 chr17 67720239 67720426 -27552225 - RMER2 LTR ERV1 0 567 371 3 1101 232 371 97 10 chr17 67721708 67721904 -27550747 - MLT1K LTR MaLR -51 544 332 3 1101 1018 243 104 44 chr17 67721938 67722235 -27550416 + ORR1D2 LTR MaLR 5 319 -51 3 1101 472 293 228 41 chr17 67722309 67722734 -27549917 + MLT1D LTR MaLR 1 505 0 3 1101 232 233 33 0 chr17 67723020 67723080 -27549571 + Tigger7 DNA MER2_type 88 149 -2342 3 1101 243 0 0 0 chr17 67723765 67723792 -27548859 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 3 1101 622 354 80 16 chr17 67727098 67727463 -27545188 + MER74A LTR ERVL 33 420 -138 3 1101 243 208 19 0 chr17 67727614 67727667 -27544984 + L1M4 LINE L1 379 432 -6472 3 1101 214 205 0 0 chr17 67728258 67728297 -27544354 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 1101 758 272 56 28 chr17 67728348 67728669 -27543982 + L1M4 LINE L1 1160 1489 -5415 3 1101 241 318 25 25 chr17 67728903 67729061 -27543590 + L1M4 LINE L1 1648 1805 -5529 3 1101 299 338 31 6 chr17 67729646 67729763 -27542888 - B1F1 SINE Alu 0 117 1 3 1101 295 273 147 65 chr17 67729896 67730080 -27542571 + B4A SINE B4 1 199 -93 3 1101 246 62 0 0 chr17 67730278 67730310 -27542341 + (TAA)n Simple_repeat Simple_repeat 3 34 0 3 1101 1535 247 56 11 chr17 67730319 67730782 -27541869 + L1M4 LINE L1 3499 3982 -3024 3 1101 844 285 76 50 chr17 67730886 67730988 -27541663 + ORR1E LTR MaLR 4 101 -258 3 1101 605 167 395 0 chr17 67730988 67731150 -27541501 - URR1A DNA MER1_type 0 226 1 3 1101 844 285 76 50 chr17 67731150 67731390 -27541261 + ORR1E LTR MaLR 102 354 -5 3 1101 379 274 14 69 chr17 67731397 67731542 -27541109 + MTEa LTR MaLR 54 190 -189 3 1101 898 72 33 0 chr17 67731683 67731836 -27540815 + (TCTA)n Simple_repeat Simple_repeat 4 161 0 3 1101 211 141 31 0 chr17 67731848 67731912 -27540739 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 3 1101 437 219 47 19 chr17 67731913 67732020 -27540631 - PB1D10 SINE Alu -7 110 1 3 1101 2887 76 15 15 chr17 67732389 67732789 -27539862 - MTB LTR MaLR 0 400 1 3 1101 632 279 67 22 chr17 67732880 67733172 -27539479 - L1M5 LINE L1 -321 5803 5497 3 1101 1457 142 0 13 chr17 67734027 67734255 -27538396 + URR1B DNA MER1_type 1 225 0 3 1101 295 262 0 12 chr17 67734287 67734368 -27538283 - Tigger16a DNA Tigger -20 913 834 3 1101 429 254 224 34 chr17 67735020 67735199 -27537452 + B3 SINE B2 2 214 -2 3 1101 228 67 0 0 chr17 67735297 67735327 -27537324 + (T)n Simple_repeat Simple_repeat 1 30 0 3 1101 1238 48 0 0 chr17 67735327 67735473 -27537178 - B1_Mm SINE Alu 0 147 2 3 1101 441 36 0 0 chr17 67735537 67735592 -27537059 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1101 328 187 0 13 chr17 67735791 67735867 -27536784 + Lx LINE L1 6556 6630 -24 3 1101 391 311 84 26 chr17 67736893 67737048 -27535603 - RSINE1 SINE B4 0 165 2 3 1101 367 71 36 0 chr17 67737114 67737170 -27535481 - HAL1-3A_ME LINE L1 -825 2033 1976 3 1101 339 263 70 36 chr17 67737314 67737452 -27535199 - MLT1A1 LTR MaLR -264 144 1 3 1101 187 56 83 0 chr17 67737562 67737598 -27535053 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 1101 352 276 9 9 chr17 67738707 67738813 -27533838 + PB1D10 SINE Alu 2 107 -10 3 1101 338 331 11 59 chr17 67739489 67739675 -27532976 - L1MB3 LINE L1 -66 6117 5941 3 1101 216 213 180 0 chr17 67741032 67741093 -27531558 + ID2 SINE ID 1 72 -11 3 1101 771 267 70 90 chr17 67741113 67741518 -27531133 - MTE2a LTR MaLR 0 419 6 3 1101 334 323 0 0 chr17 67741953 67742049 -27530602 + PB1 SINE Alu 2 97 -30 3 1101 293 355 64 14 chr17 67742032 67742172 -27530479 + RMER12 LTR ERVK 714 860 -462 3 1101 267 114 0 0 chr17 67742190 67742234 -27530417 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1101 391 296 89 27 chr17 67742276 67742422 -27530229 - B4A SINE B4 -58 234 80 3 1101 518 177 7 34 chr17 67743565 67743711 -27528940 + (TA)n Simple_repeat Simple_repeat 1 142 0 3 1101 21 0 0 0 chr17 67743739 67743760 -27528891 + AT_rich Low_complexity Low_complexity 1 21 0 3 1101 359 277 148 95 chr17 67743782 67744256 -27528395 - L1MB8 LINE L1 0 6178 5680 3 1101 700 249 41 0 chr17 67744273 67744442 -27528209 + B3 SINE B2 3 178 -38 3 1101 1501 154 109 0 chr17 67744719 67744985 -27527666 - Lx5 LINE L1 0 7050 6756 3 1101 243 0 0 0 chr17 67745090 67745117 -27527534 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1101 342 302 47 9 chr17 67745185 67745292 -27527359 - PB1D7 SINE Alu 0 120 10 3 1101 361 180 325 26 chr17 67745339 67745453 -27527198 + B1_Mur2 SINE Alu 2 149 0 3 1101 244 282 0 152 chr17 67745478 67745570 -27527081 - PB1D10 SINE Alu -35 82 5 3 1101 907 296 111 16 chr17 67745603 67746053 -27526598 - L1MB8 LINE L1 -983 5163 4671 3 1101 611 283 94 37 chr17 67746385 67746790 -27525861 - L1MB8 LINE L1 -3195 2945 2524 3 1101 371 211 11 0 chr17 67747577 67747667 -27524984 + (TA)n Simple_repeat Simple_repeat 1 91 0 3 1101 233 341 39 35 chr17 67747701 67747987 -27524664 - L1M4b LINE L1 -3644 3690 3404 3 1101 435 194 0 0 chr17 67748897 67748995 -27523656 + (TG)n Simple_repeat Simple_repeat 2 99 0 3 1101 480 238 97 23 chr17 67750589 67750781 -27521870 - MTD LTR MaLR 0 419 182 3 1101 1294 227 36 23 chr17 67750781 67751083 -27521568 - Lx6 LINE L1 -34 7426 7121 3 1101 527 309 53 24 chr17 67751083 67751289 -27521362 - MTD LTR MaLR -206 213 2 3 1101 334 262 109 40 chr17 67751880 67752055 -27520596 + MER20 DNA MER1_type 30 216 -3 3 1101 198 0 0 0 chr17 67752350 67752372 -27520279 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 3 1101 180 340 84 9 chr17 67753136 67753243 -27519408 - MIR SINE MIR -42 220 106 3 1101 428 345 79 33 chr17 67753407 67753800 -27518851 + MER90a LTR ERV1 111 521 -93 3 1101 498 312 100 52 chr17 67753985 67754215 -27518436 + MLT1F2 LTR MaLR 22 262 -298 3 1101 1378 246 72 21 chr17 67754252 67754638 -27518013 - MTD LTR MaLR -13 406 1 3 1101 417 252 74 34 chr17 67754738 67754886 -27517765 + MLT1F2 LTR MaLR 405 558 -2 3 1101 1244 255 94 46 chr17 67756495 67757029 -27515622 - Lx8 LINE L1 -1558 5915 5328 3 1101 627 200 56 8 chr17 67757038 67757164 -27515487 - B1_Mur4 SINE Alu -8 142 11 3 1101 408 184 58 0 chr17 67757258 67757345 -27515306 - PB1D9 SINE Alu 0 120 29 3 1101 255 319 11 11 chr17 67757461 67757553 -27515098 + MLT1A1 LTR MaLR 299 390 -18 3 1101 379 279 27 113 chr17 67758317 67758551 -27514100 - MLT1E1 LTR MaLR -152 528 221 3 1101 225 391 15 15 chr17 67760486 67760616 -27512035 + LTR16E1 LTR ERVL 340 469 -69 3 1101 288 0 0 0 chr17 67760896 67760928 -27511723 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 4 1101 369 255 0 67 chr17 67760976 67761081 -27511570 - MTEa LTR MaLR -30 349 252 4 1101 324 64 0 0 chr17 67761191 67761238 -27511413 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 4 1101 411 21 0 0 chr17 67761254 67761302 -27511349 + (ACTG)n Simple_repeat Simple_repeat 2 49 0 4 1101 311 244 6 177 chr17 67761328 67761385 -27511266 - MTEa LTR MaLR -223 136 90 4 1101 715 239 243 10 chr17 67761385 67761673 -27510978 - ORR1E LTR MaLR -4 355 1 4 1101 311 244 6 177 chr17 67761673 67761779 -27510872 - MTEa LTR MaLR -270 89 1 4 1101 269 305 174 38 chr17 67763012 67763196 -27509455 + ID_B1 SINE B4 15 223 -1 4 137 647 91 20 0 chr17 67764137 67764236 -27508415 + (TTTC)n Simple_repeat Simple_repeat 4 104 0 4 1102 366 169 11 22 chr17 67764229 67764320 -27508331 + CT-rich Low_complexity Low_complexity 1 90 0 4 1102 1260 70 0 0 chr17 67764321 67764492 -27508159 - B2_Mm2 SINE B2 -24 171 1 4 1102 240 322 66 11 chr17 67764666 67764757 -27507894 + PB1D10 SINE Alu 1 96 -21 4 1102 252 356 0 9 chr17 67764792 67764897 -27507754 + ID_B1 SINE B4 73 176 -48 4 1102 323 317 29 0 chr17 67764811 67764915 -27507736 + PB1D10 SINE Alu 10 116 -1 4 1102 915 234 75 99 chr17 67765177 67765561 -27507090 - MTE2b LTR MaLR -3 376 2 4 1102 1504 181 27 48 chr17 67765814 67766150 -27506501 - Lx7 LINE L1 -1 7695 7367 4 1102 24 0 0 0 chr17 67766167 67766191 -27506460 + AT_rich Low_complexity Low_complexity 1 24 0 4 1102 1046 259 26 16 chr17 67766259 67766565 -27506086 - Lx7 LINE L1 -354 7342 7034 4 1102 5406 78 88 1 chr17 67766560 67767665 -27504986 - L1VL2 LINE L1 -2283 1332 112 4 1102 597 281 47 38 chr17 67768227 67768434 -27504217 + B4A SINE B4 1 209 -83 4 1102 960 233 46 125 chr17 67768434 67768827 -27503824 - MTE2a LTR MaLR 0 379 18 4 1102 306 250 0 0 chr17 67768842 67768910 -27503741 + B4A SINE B4 202 269 -23 4 1102 775 63 31 8 chr17 67768984 67769112 -27503539 + (GGGAGA)n Simple_repeat Simple_repeat 2 132 0 4 1102 1032 45 0 67 chr17 67769113 67769306 -27503345 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 4 1102 389 20 0 20 chr17 67769307 67769358 -27503293 + (GAGAA)n Simple_repeat Simple_repeat 1 50 0 4 1102 345 293 24 31 chr17 67769679 67769806 -27502845 - Tigger7 DNA MER2_type -2361 130 5 4 1102 288 246 0 14 chr17 67770900 67770970 -27501681 - ID2 SINE ID 0 83 15 4 1102 555 257 200 23 chr17 67771679 67771981 -27500670 + ORR1E LTR MaLR 4 366 -4 4 1102 6865 90 94 19 chr17 67772102 67773177 -27499474 + Lx3_Mus LINE L1 5850 7004 -5 4 1102 261 324 0 0 chr17 67773265 67773336 -27499315 + ID4_ SINE ID 2 72 -11 4 1102 561 30 69 52 chr17 67773496 67773843 -27498808 + (CATA)n Simple_repeat Simple_repeat 1 353 0 4 1102 204 40 0 0 chr17 67774092 67774117 -27498534 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1102 276 30 0 0 chr17 67774284 67774317 -27498334 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 1102 24 32 0 0 chr17 67774399 67774430 -27498221 + AT_rich Low_complexity Low_complexity 1 31 0 4 1102 497 227 59 0 chr17 67774868 67774987 -27497664 + ID_B1 SINE B4 93 218 -6 4 1102 1854 129 44 0 chr17 67775179 67775497 -27497154 + MTC LTR MaLR 1 332 -89 4 1102 3044 92 72 2 chr17 67775497 67775941 -27496710 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1102 3546 85 36 40 chr17 67775942 67776778 -27495873 + IAPEz-int LTR ERVK 9 662 -5819 4 1102 962 59 0 0 chr17 67776778 67776897 -27495754 + IAPEz-int LTR ERVK 1359 1477 -5004 4 1102 1865 98 0 0 chr17 67776898 67777144 -27495507 + IAPEz-int LTR ERVK 2252 2497 -5183 4 1102 14844 53 9 3 chr17 67777162 67778953 -27493698 + IAPEz-int LTR ERVK 4678 6479 -2 4 1102 3137 83 72 2 chr17 67778955 67779399 -27493252 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1102 489 211 0 0 chr17 67779404 67779494 -27493157 + MTC LTR MaLR 329 418 -3 4 1102 914 268 82 51 chr17 67779498 67779813 -27492838 - ORR1D2 LTR MaLR -38 332 8 4 1102 235 352 91 18 chr17 67779929 67780149 -27492502 + L2a LINE L2 2524 2759 -660 4 1102 226 330 178 25 chr17 67780535 67780653 -27491998 + L2a LINE L2 3277 3412 -14 4 1102 225 94 0 0 chr17 67780654 67780686 -27491965 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 4 1102 4680 167 95 33 chr17 67780897 67781865 -27490786 - Lx9 LINE L1 -24 7620 6593 4 1102 23 33 0 0 chr17 67782455 67782485 -27490166 + AT_rich Low_complexity Low_complexity 1 30 0 4 1102 1050 239 15 0 chr17 67782677 67782882 -27489769 - B3 SINE B2 -3 213 6 4 1102 476 304 90 70 chr17 67783798 67783871 -27488780 - L1MA4 LINE L1 -279 6021 5964 4 1102 1275 86 0 0 chr17 67783871 67784176 -27488475 + (CA)n Simple_repeat Simple_repeat 1 305 0 4 1102 1766 315 95 44 chr17 67784176 67785898 -27486753 - L1MA4 LINE L1 -337 5963 4104 4 1102 917 163 14 0 chr17 67786007 67786148 -27486503 + Lx5 LINE L1 6676 6818 -232 4 1102 1113 204 9 31 chr17 67786161 67786389 -27486262 - Lx5 LINE L1 -377 6673 6451 4 1102 3365 138 13 4 chr17 67786377 67786931 -27485720 + L1_Mur2 LINE L1 4524 5082 -795 4 1102 287 291 145 53 chr17 67786943 67787226 -27485425 + L1_Rod LINE L1 2446 2754 -3093 4 1102 228 67 0 0 chr17 67787286 67787316 -27485335 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 4 1102 441 347 7 39 chr17 67787588 67787605 -27485046 - RSINE1 SINE B4 -2 163 148 4 1102 483 69 0 0 chr17 67787605 67787677 -27484974 + (TG)n Simple_repeat Simple_repeat 2 73 0 4 1102 441 347 7 39 chr17 67787677 67787812 -27484839 - RSINE1 SINE B4 -18 147 16 4 1102 1427 269 76 44 chr17 67789028 67789502 -27483149 + RMER5 LTR ERV1 33 521 -13 4 1102 579 164 0 0 chr17 67789661 67789765 -27482886 + (TCTCTG)n Simple_repeat Simple_repeat 1 104 0 4 1102 234 338 98 108 chr17 67789765 67790060 -27482591 - MLT1N2 LTR MaLR -262 300 9 4 1102 1136 246 40 4 chr17 67790615 67790868 -27481783 + MLT2B1 LTR ERVL 2 263 -257 4 1102 267 31 0 0 chr17 67792411 67792443 -27480208 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1102 1460 174 166 15 chr17 67792617 67792949 -27479702 - ORR1C2 LTR MaLR 0 384 3 4 1102 252 140 0 23 chr17 67793025 67793069 -27479582 + MTE2a LTR MaLR 9 51 -328 4 1102 641 110 9 0 chr17 67793089 67793198 -27479453 + (TC)n Simple_repeat Simple_repeat 1 110 0 4 1102 335 317 101 36 chr17 67794209 67794487 -27478164 - L1M3e LINE L1 -6649 381 86 4 1102 195 42 0 0 chr17 67794901 67794925 -27477726 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1102 1260 34 0 0 chr17 67794925 67795071 -27477580 - B1_Mm SINE Alu 0 147 2 4 1102 500 311 290 19 chr17 67795175 67795444 -27477207 - Tigger7 DNA MER2_type -2143 348 7 4 1102 21 0 0 0 chr17 67795993 67796014 -27476637 + AT_rich Low_complexity Low_complexity 1 21 0 4 1102 273 317 73 62 chr17 67796199 67796377 -27476274 - MER104 DNA Tc2 0 181 2 4 1102 597 234 148 5 chr17 67796471 67796660 -27475991 - ID_B1 SINE B4 -8 216 1 4 1102 305 350 8 78 chr17 67797691 67797933 -27474718 + L1MEg LINE L1 1808 2032 -4052 4 1102 447 68 0 0 chr17 67798075 67798134 -27474517 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 4 1102 241 302 105 28 chr17 67798692 67798835 -27473816 + MIRb SINE MIR 4 157 -111 4 1102 197 203 79 92 chr17 67798850 67798926 -27473725 - MIR SINE MIR -104 158 84 4 1102 225 306 68 34 chr17 67799980 67800068 -27472583 + ID_B1 SINE B4 77 167 -57 4 1102 266 215 48 46 chr17 67799998 67800071 -27472580 + B1F SINE Alu 19 92 -28 4 1102 1676 81 17 13 chr17 67802834 67803071 -27469580 + RLTR27 LTR ERVK 72 309 0 4 1102 538 319 54 6 chr17 67803071 67803238 -27469413 + Lx8 LINE L1 7175 7349 -124 4 1102 388 345 78 17 chr17 67803412 67803642 -27469009 + MER74A LTR ERVL 67 310 -248 4 1102 269 324 63 49 chr17 67804049 67804192 -27468459 + RSINE1 SINE B4 2 146 -19 4 1102 200 235 0 19 chr17 67804214 67804266 -27468385 + (CATA)n Simple_repeat Simple_repeat 2 52 0 4 1102 326 333 103 7 chr17 67804517 67804653 -27467998 + MLT1A1 LTR MaLR 258 406 -2 4 1102 378 0 0 0 chr17 67805070 67805112 -27467539 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1102 371 299 29 32 chr17 67808168 67808352 -27464299 + Lx9 LINE L1 5795 5980 -1716 4 1102 470 248 20 0 chr17 67808513 67808614 -27464037 + Lx8 LINE L1 6421 6523 -950 4 1102 267 190 134 37 chr17 67809043 67809125 -27463526 - MLT1A1 LTR MaLR -25 383 294 4 1102 453 19 0 0 chr17 67809323 67809377 -27463274 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1102 1348 277 65 32 chr17 67810939 67811576 -27461075 - Tigger7 DNA MER2_type 0 705 59 4 1102 285 29 0 0 chr17 67811808 67811842 -27460809 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1102 822 296 40 28 chr17 67811903 67812150 -27460501 - B4 SINE B4 -42 250 1 4 1102 406 170 0 26 chr17 67813087 67813202 -27459449 + GA-rich Low_complexity Low_complexity 4 115 0 4 1102 2380 97 0 0 chr17 67813209 67813529 -27459122 + ORR1A2 LTR MaLR 1 320 -7 4 1102 729 129 0 0 chr17 67813546 67813662 -27458989 + (GGGA)n Simple_repeat Simple_repeat 2 117 0 4 1102 588 95 0 0 chr17 67813664 67813748 -27458903 + (TAGA)n Simple_repeat Simple_repeat 2 85 0 4 1102 223 340 38 19 chr17 67814493 67814598 -27458053 - MIRc SINE MIR -5 263 157 4 1102 349 343 55 20 chr17 67814857 67815003 -27457648 + MER20 DNA MER1_type 35 185 -34 4 1102 234 313 30 20 chr17 67815481 67815582 -27457069 + MLT1A1 LTR MaLR 307 408 0 4 1102 597 286 130 23 chr17 67815800 67816015 -27456636 + B4A SINE B4 48 285 -7 4 1102 248 293 0 0 chr17 67816021 67816079 -27456572 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 1102 310 260 77 107 chr17 67817415 67817583 -27455068 - CYRA11_Mm Unknown Y-chromosome -283 334 172 4 1102 697 180 34 48 chr17 67817438 67817584 -27455067 + URR1A DNA MER1_type 83 226 0 4 1102 576 238 26 45 chr17 67817745 67817899 -27454752 + RSINE1 SINE B4 4 154 -11 4 1102 23 0 0 0 chr17 67817937 67817960 -27454691 + AT_rich Low_complexity Low_complexity 1 23 0 4 1102 350 317 17 72 chr17 67818154 67818334 -27454317 - L2a LINE L2 -6 3420 3251 4 1102 248 161 17 51 chr17 67818380 67818439 -27454212 - B3 SINE B2 -1 215 159 4 1102 1101 190 40 0 chr17 67819441 67819641 -27453010 + B3 SINE B2 9 216 0 4 1102 442 291 24 107 chr17 67820110 67820279 -27452372 + RSINE1 SINE B4 11 165 0 5 1102 198 206 0 0 chr17 67820282 67820345 -27452306 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 1102 216 0 0 0 chr17 67820817 67820841 -27451810 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1102 341 238 76 69 chr17 67821613 67821744 -27450907 - B1F SINE Alu 0 149 18 5 1102 279 0 0 0 chr17 67823794 67823825 -27448826 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1102 415 271 33 46 chr17 67824423 67824574 -27448077 - B4A SINE B4 -2 290 142 5 1102 223 242 164 87 chr17 67824572 67824676 -27447975 - B3A SINE B2 -82 116 5 5 1102 281 306 118 24 chr17 67825544 67825671 -27446980 + ORR1E LTR MaLR 1 139 -220 5 1102 244 326 166 7 chr17 67825968 67826107 -27446544 - MLT1J2 LTR MaLR -16 432 272 5 1102 386 245 43 0 chr17 67826634 67826728 -27445923 + MER58C DNA MER1_type 117 214 -1 5 1102 907 249 197 68 chr17 67826965 67827305 -27445346 - MTD LTR MaLR -14 405 22 5 1102 377 306 128 86 chr17 67828585 67828842 -27443809 + MER2 DNA MER2_type 78 345 0 5 1102 180 292 46 0 chr17 67829418 67829483 -27443168 - MIR SINE MIR -63 145 78 5 1102 197 159 0 22 chr17 67829654 67829699 -27442952 + CT-rich Low_complexity Low_complexity 2 45 0 5 1102 311 229 7 213 chr17 67830561 67830716 -27441935 + RMER15 LTR ERVL 1 123 -452 5 1102 320 330 73 62 chr17 67830947 67831222 -27441429 + ORR1E LTR MaLR 1 278 -96 5 1102 1978 148 21 3 chr17 67831451 67831783 -27440868 - ORR1A1 LTR MaLR -8 338 1 5 1102 305 200 57 91 chr17 67833502 67833569 -27439082 + L1MA6 LINE L1 5915 5984 -316 5 1102 1029 95 0 0 chr17 67833569 67833716 -27438935 + (GGGAA)n Simple_repeat Simple_repeat 2 148 0 5 1102 305 200 57 91 chr17 67833716 67833736 -27438915 + L1MA6 LINE L1 5985 5999 -301 5 1102 247 234 58 108 chr17 67833794 67833914 -27438737 + L1MA6 LINE L1 6154 6267 -33 5 1102 411 21 0 0 chr17 67834513 67834561 -27438090 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1102 1141 146 379 15 chr17 67834980 67835252 -27437399 + ORR1D1 LTR MaLR 3 373 -1 5 1102 1086 189 33 24 chr17 67836135 67836346 -27436305 - B3 SINE B2 -3 213 1 5 1102 253 212 40 89 chr17 67836354 67836478 -27436173 - Lx9 LINE L1 -1 7643 7526 5 1102 360 0 0 0 chr17 67836478 67836518 -27436133 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1102 542 322 27 0 chr17 67836608 67836754 -27435897 - B3A SINE B2 -2 196 47 5 1102 24 53 0 0 chr17 67836869 67836907 -27435744 + AT_rich Low_complexity Low_complexity 1 38 0 5 1102 395 289 53 80 chr17 67837115 67837303 -27435348 + L1MD2 LINE L1 2393 2575 -4058 5 1102 422 319 133 0 chr17 67837309 67837444 -27435207 + B3A SINE B2 2 154 -44 5 1102 204 40 0 0 chr17 67837444 67837469 -27435182 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 1102 21 36 0 0 chr17 67837469 67837497 -27435154 + AT_rich Low_complexity Low_complexity 1 28 0 5 1102 475 318 85 55 chr17 67837498 67837993 -27434658 + L1M2 LINE L1 5290 5799 -504 5 1102 633 270 70 0 chr17 67837994 67838179 -27434472 + Lx8 LINE L1 6578 6775 -698 5 1102 247 235 0 0 chr17 67838178 67838229 -27434422 + Lx8 LINE L1 6720 6770 -703 5 1102 433 238 0 0 chr17 67838230 67838314 -27434337 + Lx8 LINE L1 6711 6794 -679 5 1102 821 224 40 14 chr17 67838311 67838533 -27434118 + Lx8 LINE L1 7010 7237 -236 5 1102 688 305 163 39 chr17 67839059 67839390 -27433261 + MTE2b LTR MaLR 8 379 0 5 1102 850 244 105 0 chr17 67839433 67839642 -27433009 - Lx6 LINE L1 -663 6797 6567 5 1102 1100 59 22 0 chr17 67839729 67839864 -27432787 + B1_Mm SINE Alu 2 139 -8 5 1102 390 21 0 0 chr17 67839864 67839911 -27432740 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 5 1102 526 340 96 25 chr17 67839911 67840264 -27432387 + L1MD2 LINE L1 3958 4335 -2202 5 1102 328 234 119 0 chr17 67840513 67840600 -27432051 + RSINE1 SINE B4 3 99 -193 5 1102 554 341 75 11 chr17 67840602 67840881 -27431770 + L1MD2 LINE L1 5953 6249 -501 5 1102 411 307 21 90 chr17 67840903 67841193 -27431458 + L1MD2 LINE L1 6481 6750 0 5 1102 432 122 0 0 chr17 67841690 67841772 -27430879 + (TG)n Simple_repeat Simple_repeat 1 82 0 5 1102 371 256 0 35 chr17 67841784 67841869 -27430782 - RSINE1 SINE B4 -42 123 42 5 1102 2175 124 63 6 chr17 67842770 67843102 -27429549 + Lx4A LINE L1 6708 7058 0 5 1102 440 18 0 17 chr17 67843145 67843203 -27429448 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 1102 2006 152 102 26 chr17 67843812 67844196 -27428455 - MTC LTR MaLR -3 418 6 5 1102 559 295 51 70 chr17 67846455 67846728 -27425923 - MLT1A0 LTR MaLR -26 339 72 5 1102 667 264 121 17 chr17 67846756 67846987 -27425664 - B4 SINE B4 -37 255 1 5 1102 289 177 0 25 chr17 67847180 67847261 -27425390 + GA-rich Low_complexity Low_complexity 2 80 0 5 1102 249 231 30 15 chr17 67847264 67847330 -27425321 + G-rich Low_complexity Low_complexity 4 70 0 5 1102 309 332 107 21 chr17 67847415 67847658 -27424993 + L2 LINE L2 2321 2584 -835 5 1102 184 250 20 40 chr17 67847737 67847787 -27424864 + L2b LINE L2 3322 3370 -5 5 1102 478 179 0 12 chr17 67848330 67848415 -27424236 - RLTR16 LTR ERVK -2 503 420 5 1102 730 138 17 0 chr17 67848412 67848528 -27424123 - RLTR16 LTR ERVK -387 118 1 5 1102 209 33 33 0 chr17 67848625 67848655 -27423996 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1102 543 56 0 0 chr17 67848984 67849055 -27423596 + (TG)n Simple_repeat Simple_repeat 2 72 0 5 1102 701 260 62 0 chr17 67849093 67849301 -27423350 - B4A SINE B4 -71 221 1 5 1102 182 307 25 62 chr17 67850615 67850695 -27421956 - MIRb SINE MIR -32 236 160 5 1102 1091 266 16 8 chr17 67851406 67851649 -27421002 + B4A SINE B4 2 246 -46 5 1102 459 0 0 0 chr17 67851664 67851715 -27420936 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1102 539 299 109 36 chr17 67853366 67853779 -27418872 + RMER5 LTR ERV1 59 501 -33 5 1102 23 33 0 0 chr17 67855081 67855111 -27417540 + AT_rich Low_complexity Low_complexity 1 30 0 5 1102 2116 102 37 90 chr17 67855627 67856060 -27416591 - RMER17C LTR ERVK 0 410 1 5 1102 399 68 0 0 chr17 67856224 67856283 -27416368 + (TG)n Simple_repeat Simple_repeat 1 59 0 5 1102 432 0 0 0 chr17 67856283 67856330 -27416321 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 1102 183 319 42 33 chr17 67856700 67856820 -27415831 + L2 LINE L2 2645 2765 -654 5 1102 184 338 24 24 chr17 67859093 67859175 -27413476 - MIRm SINE MIR -107 169 88 5 1102 230 268 58 47 chr17 67859218 67859304 -27413347 + Charlie8 DNA MER1_type 85 171 -2257 5 1102 568 317 75 32 chr17 67859767 67859953 -27412698 - LTR82B Low_complexity ERVL -568 262 69 5 1102 245 315 43 78 chr17 67860079 67860220 -27412431 + Charlie8 DNA MER1_type 294 429 -1999 5 1102 396 55 0 0 chr17 67861831 67861886 -27410765 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1102 358 229 16 0 chr17 67863205 67863327 -27409324 + (CA)n Simple_repeat Simple_repeat 1 124 0 5 1102 252 270 0 0 chr17 67863363 67863478 -27409173 + (CA)n Simple_repeat Simple_repeat 1 115 0 5 1102 479 231 16 33 chr17 67864198 67864319 -27408332 - Lx8 LINE L1 -252 7221 7103 5 1102 231 252 112 48 chr17 67864324 67864449 -27408202 + MIRc SINE MIR 16 148 -120 5 1102 741 33 0 0 chr17 67865196 67865288 -27407363 + (CA)n Simple_repeat Simple_repeat 2 93 0 5 1102 487 165 73 73 chr17 67865751 67865875 -27406776 + MT2B LTR ERVL 155 278 -323 5 1102 1081 59 0 0 chr17 67865767 67865902 -27406749 + B1_Mus1 SINE Alu 14 148 0 5 1102 327 104 0 0 chr17 67865903 67865951 -27406700 + (GAAA)n Simple_repeat Simple_repeat 2 49 0 5 1102 528 89 0 0 chr17 67866166 67866245 -27406406 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 5 1102 254 164 91 0 chr17 67866407 67866462 -27406189 + ID4 SINE ID 2 61 -22 5 1102 1030 283 85 36 chr17 67866471 67866940 -27405711 - RMER5 LTR ERV1 -10 524 33 5 1102 309 271 211 6 chr17 67866950 67867106 -27405545 + ID_B1 SINE B4 24 211 -13 5 1102 246 232 147 69 chr17 67867020 67867122 -27405529 + B1_Mur4 SINE Alu 39 148 -2 5 1102 213 118 29 0 chr17 67868370 67868404 -27404247 + ID4_ SINE ID 12 46 -37 5 1102 459 0 0 0 chr17 67868450 67868501 -27404150 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1102 333 0 0 0 chr17 67868501 67868537 -27404114 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 1102 411 207 0 0 chr17 67868751 67868891 -27403760 + (CA)n Simple_repeat Simple_repeat 1 140 0 5 1102 806 163 0 11 chr17 67868942 67869122 -27403529 + (CA)n Simple_repeat Simple_repeat 2 179 0 5 1102 913 243 26 22 chr17 67874010 67874237 -27398414 + Lx6 LINE L1 7233 7460 0 5 1102 525 319 70 85 chr17 67874261 67874365 -27398286 + MLT1B LTR MaLR 1 108 -282 5 1102 563 220 23 30 chr17 67874365 67874496 -27398155 + B1F SINE Alu 1 130 -19 5 1102 525 319 70 85 chr17 67874496 67874586 -27398065 + MLT1B LTR MaLR 109 202 -188 5 1102 483 33 0 0 chr17 67874586 67874647 -27398004 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 1102 525 319 70 85 chr17 67874647 67874793 -27397858 + MLT1B LTR MaLR 203 337 -53 5 1102 242 116 0 23 chr17 67874901 67874945 -27397706 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 1102 2008 128 144 46 chr17 67875363 67875732 -27396919 - RLTR44A LTR ERVK 0 405 1 5 1102 1321 171 241 3 chr17 67876429 67876728 -27395923 + ORR1D1 LTR MaLR 1 370 -4 5 1102 1483 114 16 7 chr17 67876805 67877047 -27395604 - ORR1A3 LTR MaLR -71 303 8 5 1102 702 296 68 0 chr17 67877058 67877264 -27395387 - B4A SINE B4 -71 221 2 5 1102 387 291 159 23 chr17 67877283 67877459 -27395192 - L1ME1 LINE L1 -302 5877 5678 5 1102 1153 245 61 69 chr17 67877465 67877842 -27394809 - MT2A LTR ERVL -159 374 1 5 1102 409 296 83 51 chr17 67877871 67878088 -27394563 - L1ME1 LINE L1 -581 5598 5375 5 1102 352 281 97 63 chr17 67878063 67878127 -27394524 - L1MC LINE L1 -823 5323 5258 5 1102 658 239 0 27 chr17 67878127 67878273 -27394378 - B1_Mur2 SINE Alu -7 142 1 5 1102 352 281 97 63 chr17 67878273 67878383 -27394268 - L1MC LINE L1 -889 5257 5143 5 1102 1225 73 42 68 chr17 67878388 67878580 -27394071 + B2_Mm2 SINE B2 1 187 -8 5 1102 901 118 0 0 chr17 67878587 67878714 -27393937 + B3 SINE B2 4 130 -86 5 1102 480 121 0 0 chr17 67878732 67878823 -27393828 + (CATA)n Simple_repeat Simple_repeat 2 92 0 5 1102 823 205 67 16 chr17 67878978 67879171 -27393480 - B3 SINE B2 -1 215 13 5 1102 770 254 42 0 chr17 67879172 67879361 -27393290 - ID_B1 SINE B4 -2 222 26 6 1102 460 274 205 14 chr17 67879443 67879799 -27392852 - L1MC LINE L1 -3552 2594 2171 5 1102 349 279 6 6 chr17 67880472 67880652 -27391999 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 6 1102 216 257 0 0 chr17 67880789 67880859 -27391792 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 6 1102 284 296 200 8 chr17 67882176 67882434 -27390217 + MER5C DNA MER1_type 6 312 -1 6 1102 2912 98 155 9 chr17 67882557 67883021 -27389630 + Lx2 LINE L1 6465 6996 -1 6 1102 1634 209 46 8 chr17 67883147 67883513 -27389138 - RLTR14 LTR ERV1 -2 380 1 6 1102 1256 161 36 22 chr17 67883638 67883861 -27388790 + URR1A DNA MER1_type 1 226 0 6 1102 4469 12 2 2 chr17 67884362 67884855 -27387796 + MT2_Mm LTR ERVL 1 493 0 6 1102 40946 14 6 0 chr17 67884855 67890181 -27382470 + MERVL-int LTR ERVL 1 5360 -125 6 1102 384 179 46 35 chr17 67890181 67890268 -27382383 + ORR1A3-int LTR MaLR 553 640 -1323 6 1102 319 0 0 0 chr17 67890268 67890306 -27382345 + MERVL-int LTR ERVL 5448 5485 0 6 1102 4469 12 2 2 chr17 67890306 67890799 -27381852 + MT2_Mm LTR ERVL 1 493 0 6 1102 227 325 26 0 chr17 67890816 67890893 -27381758 + ID4_ SINE ID 2 80 -3 6 1102 230 186 23 0 chr17 67893100 67893143 -27379508 + CT-rich Low_complexity Low_complexity 2 45 0 6 1102 254 50 25 0 chr17 67894322 67894362 -27378289 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 6 1102 945 78 46 23 chr17 67894362 67894493 -27378158 - B1_Mus1 SINE Alu -13 135 2 6 137 385 237 83 102 chr17 67895113 67895329 -27377322 - MER2 DNA MER2_type -5 340 129 6 1103 1518 224 52 40 chr17 67895329 67895407 -27377244 + MTD LTR MaLR 1 78 -341 6 1103 4298 37 84 2 chr17 67895407 67895928 -27376723 + LTRIS2 LTR ERV1 1 564 0 6 1103 1518 215 69 40 chr17 67895928 67896262 -27376389 + MTD LTR MaLR 79 405 -14 6 1103 2241 85 82 0 chr17 67896287 67896617 -27376034 + IAPEY2_LTR LTR ERVK 1 357 0 6 1103 360 364 11 44 chr17 67897464 67897645 -27375006 - B4A SINE B4 -117 175 1 6 1103 409 361 42 42 chr17 67897678 67897892 -27374759 - MER20 DNA MER1_type -1 218 5 6 1103 204 40 0 0 chr17 67898121 67898146 -27374505 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 6 1103 314 0 49 0 chr17 67898260 67898301 -27374350 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 6 1103 275 323 107 58 chr17 67898856 67899114 -27373537 + L2a LINE L2 2970 3270 -156 6 1103 231 263 53 0 chr17 67899114 67899190 -27373461 - ID4_ SINE ID -2 81 2 6 1103 265 332 167 63 chr17 67899190 67899345 -27373306 + L2a LINE L2 3271 3425 -1 6 1103 274 144 21 70 chr17 67899446 67899588 -27373063 + G-rich Low_complexity Low_complexity 4 138 0 6 1103 387 0 0 0 chr17 67899671 67899714 -27372937 + (TC)n Simple_repeat Simple_repeat 1 43 0 6 1103 351 0 0 0 chr17 67899714 67899752 -27372899 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1103 513 294 126 0 chr17 67900982 67901125 -27371526 + 7SK RNA RNA 83 243 -88 6 1103 234 150 0 0 chr17 67901485 67901525 -27371126 + (T)n Simple_repeat Simple_repeat 1 40 0 6 1103 396 0 0 0 chr17 67901868 67901912 -27370739 + (TAAA)n Simple_repeat Simple_repeat 4 47 0 6 1103 198 0 0 0 chr17 67903388 67903410 -27369241 + (CA)n Simple_repeat Simple_repeat 2 23 0 6 1103 2014 129 29 3 chr17 67903675 67903986 -27368665 - ORR1A2 LTR MaLR -8 319 1 6 1103 293 307 115 83 chr17 67905038 67905230 -27367421 - MLT1A1 LTR MaLR -206 202 5 6 1103 218 229 42 0 chr17 67905552 67905600 -27367051 + MIRc SINE MIR 91 140 -128 6 1103 417 39 0 0 chr17 67905945 67905996 -27366655 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1103 271 311 68 0 chr17 67907382 67907456 -27365195 - RSINE1 SINE B4 -85 80 2 6 1103 261 239 30 0 chr17 67907469 67907536 -27365115 - MLT1A0 LTR MaLR -225 140 72 6 1103 893 229 12 6 chr17 67908278 67908449 -27364202 - ID_B1 SINE B4 -5 219 48 6 1103 489 90 79 0 chr17 67908454 67908543 -27364108 - Lx LINE L1 -7 6647 6552 6 1103 2277 183 71 16 chr17 67908543 67909033 -27363618 - MTC-int LTR MaLR -740 518 2 6 1103 1402 189 46 15 chr17 67909032 67909295 -27363356 - MTC LTR MaLR 0 421 151 6 1103 1551 137 131 11 chr17 67909296 67909876 -27362775 - L1_Mur3 LINE L1 -4429 1451 798 6 1103 259 274 68 0 chr17 67909876 67909949 -27362702 + B3 SINE B2 131 208 -8 6 1103 342 284 10 69 chr17 67910190 67910253 -27362398 + ID_B1 SINE B4 128 186 -38 6 1103 3755 162 77 23 chr17 67910253 67910952 -27361699 - RMER19A LTR ERVK 0 737 1 6 1103 342 284 10 69 chr17 67910952 67910990 -27361661 + ID_B1 SINE B4 187 223 -1 6 1103 598 291 22 44 chr17 67911631 67911814 -27360837 + B3A SINE B2 8 186 -12 6 1103 274 299 94 86 chr17 67912230 67912347 -27360304 - RMER10B LTR ERVL -10 388 271 6 1103 571 301 123 81 chr17 67912638 67913253 -27359398 + L1M4 LINE L1 408 1040 -5502 6 1103 491 335 33 19 chr17 67913253 67913466 -27359185 - ID_B1 SINE B4 -8 216 1 6 1103 571 301 123 81 chr17 67913466 67913619 -27359032 + L1M4 LINE L1 1041 1209 -5333 6 1103 361 293 155 25 chr17 67914822 67915067 -27357584 + B4A SINE B4 2 278 -14 6 1103 225 210 16 31 chr17 67915074 67915165 -27357486 + (CA)n Simple_repeat Simple_repeat 1 89 0 6 1103 477 90 0 0 chr17 67915845 67915912 -27356739 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 1103 800 253 35 20 chr17 67916087 67916341 -27356310 - RLTR15 LTR ERVK -30 329 72 6 1103 194 150 0 24 chr17 67916355 67916396 -27356255 + CT-rich Low_complexity Low_complexity 1 40 0 6 1103 297 231 35 53 chr17 67916396 67916510 -27356141 - RLTR15 LTR ERVK -247 112 1 6 1103 261 0 0 0 chr17 67917397 67917426 -27355225 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 1103 2348 146 78 51 chr17 67917439 67917684 -27354967 + RMER6B LTR ERVK 1 255 -206 6 1103 1196 49 14 0 chr17 67917684 67917827 -27354824 + B1_Mus1 SINE Alu 4 148 0 6 1103 639 0 0 0 chr17 67917827 67917898 -27354753 + (GA)n Simple_repeat Simple_repeat 2 72 0 6 1103 2348 146 78 51 chr17 67917898 67918100 -27354551 + RMER6B LTR ERVK 256 460 -1 6 1103 2489 184 44 16 chr17 67918145 67918601 -27354050 + RLTR20B1 LTR ERVK 1 456 -107 6 1103 243 0 0 0 chr17 67918601 67918628 -27354023 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 1103 2489 184 44 16 chr17 67918628 67918669 -27353982 + RLTR20B1 LTR ERVK 457 510 -53 6 1103 207 100 0 0 chr17 67919020 67919050 -27353601 + (CCCCCA)n Simple_repeat Simple_repeat 1 30 0 6 1103 267 256 13 13 chr17 67919087 67919166 -27353485 - ID4 SINE ID -3 80 2 6 1103 1196 283 74 70 chr17 67919166 67919678 -27352973 + MLT2B2 LTR ERVL 1 514 -1 6 1103 2211 73 0 7 chr17 67919733 67920043 -27352608 - L1_Mus1 LINE L1 0 6567 6272 6 1103 983 134 194 0 chr17 67920089 67920275 -27352376 - URR1A DNA MER1_type 0 226 5 6 1103 473 271 99 37 chr17 67920589 67920750 -27351901 + MER104 DNA Tc2 8 178 -3 6 1103 583 26 13 0 chr17 67921106 67921182 -27351469 - B1_Mus2 SINE Alu 0 147 71 6 1103 485 259 98 49 chr17 67923110 67923238 -27349413 + MLT1B LTR MaLR 24 149 -241 6 1103 2158 113 9 58 chr17 67923238 67923584 -27349067 + ORR1A4 LTR MaLR 1 329 0 6 1103 485 274 179 19 chr17 67923584 67923773 -27348878 + MLT1B LTR MaLR 150 378 -12 6 1103 802 274 179 21 chr17 67923851 67924176 -27348475 - MTEa LTR MaLR -1 378 3 6 1103 186 43 0 0 chr17 67924876 67924899 -27347752 + (TTTTG)n Simple_repeat Simple_repeat 5 27 0 6 1103 456 51 0 0 chr17 67925469 67925528 -27347123 + (TG)n Simple_repeat Simple_repeat 1 59 0 6 1103 316 301 24 0 chr17 67927337 67927420 -27345231 + ID_B1 SINE B4 94 178 -46 6 1103 348 255 43 0 chr17 67927427 67927597 -27345054 + GA-rich Low_complexity Low_complexity 1 177 0 6 1103 351 65 0 0 chr17 67927616 67927662 -27344989 + (GA)n Simple_repeat Simple_repeat 1 46 0 6 1103 279 0 0 0 chr17 67927888 67927919 -27344732 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1103 238 307 0 33 chr17 67927935 67928009 -27344642 - RMER12 LTR ERVK -487 835 765 6 1103 2832 39 2 174 chr17 67928009 67928480 -27344171 + RLTR10 LTR ERVK 1 390 0 6 1103 238 307 0 33 chr17 67928480 67928496 -27344155 - RMER12 LTR ERVK -558 764 749 6 1103 17202 24 1 13 chr17 67928496 67930457 -27342194 + RLTR10-int LTR ERVK 47 1984 -3 6 1103 2767 34 2 176 chr17 67930459 67930926 -27341725 + RLTR10 LTR ERVK 1 386 -4 6 1103 451 320 33 27 chr17 67931619 67931802 -27340849 - MER2 DNA MER2_type -71 274 91 6 1103 332 357 47 34 chr17 67933248 67933396 -27339255 - ID_B1 SINE B4 -5 219 70 6 1103 369 239 27 20 chr17 67933396 67933695 -27338956 + (TG)n Simple_repeat Simple_repeat 1 301 0 6 1103 878 332 19 4 chr17 67933721 67933981 -27338670 - B4 SINE B4 -15 277 14 6 1103 24 0 0 0 chr17 67934619 67934643 -27338008 + AT_rich Low_complexity Low_complexity 1 24 0 6 1103 458 292 97 0 chr17 67935330 67935474 -27337177 + B4A SINE B4 50 207 -85 6 1103 267 31 0 0 chr17 67935480 67935512 -27337139 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 6 1103 3437 40 0 0 chr17 67935518 67935914 -27336737 - MTA_Mm LTR MaLR 0 396 1 6 1103 852 230 89 0 chr17 67935929 67936120 -27336531 + B3 SINE B2 8 215 -1 6 1103 243 0 0 0 chr17 67936617 67936644 -27336007 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 1103 209 91 0 43 chr17 67936867 67936913 -27335738 + (TTTTTG)n Simple_repeat Simple_repeat 4 47 0 6 1103 606 261 11 80 chr17 67939608 67939783 -27332868 - RSINE1 SINE B4 0 165 3 6 1103 822 269 115 2 chr17 67940051 67940497 -27332154 + L1M2 LINE L1 5270 5768 -523 6 1103 848 310 35 43 chr17 67940556 67940950 -27331701 - Charlie1b DNA MER1_type -131 392 2 6 1103 180 203 42 99 chr17 67941139 67941210 -27331441 + L2 LINE L2 2004 2070 -1349 6 1103 4796 11 0 0 chr17 67942017 67942543 -27330108 - L1Md_T LINE L1 0 6582 6057 6 1103 302 253 13 0 chr17 67942547 67942622 -27330029 + L1MB1 LINE L1 5804 5879 -310 6 1103 232 286 0 0 chr17 67942788 67942844 -27329807 - ID4 SINE ID -25 58 3 6 1103 351 308 95 25 chr17 67942963 67943206 -27329445 - L1M6 LINE L1 -4708 1788 1529 6 1103 774 0 0 0 chr17 67943373 67943459 -27329192 + (TCTCC)n Simple_repeat Simple_repeat 5 90 0 6 1103 13220 63 7 9 chr17 67943461 67944169 -27328482 - L1Md_F2 LINE L1 -554 6028 5323 6 1103 1393 84 16 0 chr17 67944169 67944359 -27328292 - B2_Mm2 SINE B2 -1 194 2 6 1103 13220 62 2 8 chr17 67944359 67945477 -27327174 - L1Md_F2 LINE L1 -561 5322 4206 6 1103 13432 59 8 0 chr17 67945476 67947197 -27325454 + L1Md_F2 LINE L1 2495 4229 -1654 6 1103 3263 89 4 27 chr17 67947894 67948368 -27324283 - L1_Mus3 LINE L1 -12 6626 6164 6 1103 2990 90 6 5 chr17 67948368 67948792 -27323859 + L1_Mus3 LINE L1 5768 6513 -537 7 1103 919 298 131 19 chr17 67948902 67949261 -27323390 + MTD LTR MaLR 1 399 -20 7 1103 321 26 0 0 chr17 67949375 67949413 -27323238 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1103 1356 47 0 0 chr17 67949413 67949585 -27323066 + (TGG)n Simple_repeat Simple_repeat 3 174 0 7 1103 672 286 98 8 chr17 67949989 67950253 -27322398 + B4A SINE B4 1 288 -4 7 1103 342 290 46 109 chr17 67951089 67951263 -27321388 + B3 SINE B2 27 189 -27 7 1103 699 196 18 0 chr17 67952950 67953118 -27319533 + GA-rich Low_complexity Low_complexity 1 171 0 7 1103 232 267 32 53 chr17 67953826 67953921 -27318730 + MTEb LTR MaLR 276 368 -11 7 1103 684 298 193 34 chr17 67954094 67954682 -27317969 + LTR48 LTR ERV1 71 628 -16 7 1103 506 291 152 47 chr17 67954921 67955264 -27317387 - MTEb LTR MaLR 0 379 1 7 1103 409 289 25 24 chr17 67955510 67955663 -27316988 - MTD LTR MaLR -6 413 222 7 1103 787 303 16 32 chr17 67955696 67955945 -27316706 - MTD LTR MaLR -157 262 18 7 1103 2334 72 3 62 chr17 67956799 67957138 -27315513 + ORR1A2 LTR MaLR 1 319 -8 7 1103 2328 89 3 63 chr17 67957398 67957746 -27314905 - ORR1A2 LTR MaLR 0 327 1 7 1103 703 257 95 0 chr17 67958979 67959127 -27313524 + RSINE1 SINE B4 4 165 0 7 1103 392 261 101 44 chr17 67959152 67959439 -27313212 - RMER12 LTR ERVK -266 1306 770 7 1103 251 253 250 39 chr17 67959443 67959599 -27313052 - RLTR21 LTR ERVK -318 1254 1066 7 1103 2670 180 28 37 chr17 67959875 67960412 -27312239 + RMER5 LTR ERV1 3 534 0 7 1103 367 372 69 35 chr17 67960436 67960639 -27312012 + MER44B DNA MER2_type 4 213 -337 7 1103 320 246 210 7 chr17 67960737 67960880 -27311771 + MER44B DNA MER2_type 377 548 -2 7 1103 338 157 82 82 chr17 67962063 67962160 -27310491 + MTE2b LTR MaLR 273 369 -10 7 1103 352 313 96 15 chr17 67962250 67962386 -27310265 - MER58A DNA MER1_type -66 158 12 7 1103 235 291 133 100 chr17 67962644 67962766 -27309885 + ORR1C2 LTR MaLR 81 198 -186 7 1103 1094 219 4 18 chr17 67962766 67962994 -27309657 + URR1B DNA MER1_type 1 225 0 7 1103 235 291 133 100 chr17 67962994 67963150 -27309501 + ORR1C2 LTR MaLR 199 368 -16 7 1103 369 0 0 0 chr17 67965688 67965729 -27306922 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1103 371 320 10 0 chr17 67965740 67965840 -27306811 - ID_B1 SINE B4 -29 195 95 7 1103 850 229 24 28 chr17 67966074 67966285 -27306366 + B3 SINE B2 2 211 -5 7 1103 250 284 195 37 chr17 67966399 67966589 -27306062 - L2 LINE L2 -462 2957 2738 7 1103 317 76 24 71 chr17 67966591 67966676 -27305975 + (CAGAGA)n Simple_repeat Simple_repeat 4 84 0 7 1103 604 274 40 89 chr17 67966732 67966956 -27305695 + B3 SINE B2 4 216 0 7 1103 618 233 0 0 chr17 67967342 67967522 -27305129 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1103 1170 68 0 20 chr17 67967799 67967949 -27304702 + B1_Mus1 SINE Alu 2 148 0 7 1103 459 0 0 0 chr17 67968369 67968420 -27304231 + (CA)n Simple_repeat Simple_repeat 1 51 0 7 1103 435 328 199 15 chr17 67969230 67969842 -27302809 + L2 LINE L2 2339 3063 -356 7 1103 1361 283 106 24 chr17 67969993 67970486 -27302165 - MT2A LTR ERVL 0 533 1 7 1103 373 323 8 38 chr17 67970503 67970635 -27302016 - Tigger7 DNA MER2_type -14 2477 2350 7 1103 435 358 74 16 chr17 67970676 67970920 -27301731 - MER77 LTR ERVL -308 299 42 7 1103 233 163 0 20 chr17 67971598 67971611 -27301040 + (TATG)n Simple_repeat Simple_repeat 1 13 0 7 1103 1050 144 0 0 chr17 67971611 67971791 -27300860 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1103 233 163 0 20 chr17 67971791 67971827 -27300824 + (TATG)n Simple_repeat Simple_repeat 1 36 0 7 1103 960 164 3 0 chr17 67971821 67972122 -27300529 + (TG)n Simple_repeat Simple_repeat 1 301 0 7 1103 8501 121 32 133 chr17 67973187 67973406 -27299245 - RLTR21 LTR ERVK -36 1536 1308 7 1103 324 0 0 0 chr17 67973406 67973442 -27299209 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 1103 8501 121 32 133 chr17 67973442 67973500 -27299151 - RLTR21 LTR ERVK -265 1307 1255 7 1103 499 99 22 11 chr17 67973500 67973592 -27299059 + (CATA)n Simple_repeat Simple_repeat 2 94 0 7 1103 8501 121 32 133 chr17 67973592 67975022 -27297629 - RLTR21 LTR ERVK -318 1254 1 7 1103 205 379 22 29 chr17 67975116 67975252 -27297399 + MER5B DNA MER1_type 29 163 -15 7 1103 3654 86 56 68 chr17 67975663 67976237 -27296414 + RMER2 LTR ERV1 1 567 0 7 1103 997 204 11 0 chr17 67979739 67979915 -27292736 - B3 SINE B2 0 216 39 7 1103 569 144 11 33 chr17 67982789 67982969 -27289682 + (TCTCTG)n Simple_repeat Simple_repeat 2 177 0 7 1103 257 308 136 45 chr17 67983090 67983267 -27289384 + MLT1B LTR MaLR 195 387 -3 7 1103 646 256 19 153 chr17 67984124 67984548 -27288103 + RMER16 LTR ERVK 2 533 0 7 1103 1168 74 0 0 chr17 67984855 67985003 -27287648 + B1_Mus1 SINE Alu 1 148 0 7 1103 235 107 53 13 chr17 67985003 67985079 -27287572 + (TA)n Simple_repeat Simple_repeat 1 79 0 7 1103 1007 253 165 35 chr17 67985590 67985959 -27286692 + MTD LTR MaLR 3 419 0 7 1103 340 331 31 0 chr17 67986737 67986864 -27285787 + B4A SINE B4 1 131 -161 7 1103 243 333 0 11 chr17 67987082 67987173 -27285478 + RSINE1 SINE B4 76 165 0 7 1103 335 281 114 40 chr17 67987307 67987651 -27285000 - RMER12 LTR ERVK -334 988 743 7 1103 389 169 25 25 chr17 67988006 67988085 -27284566 + ID2 SINE ID 2 80 -3 7 1103 948 292 25 0 chr17 67988646 67988889 -27283762 + B4A SINE B4 21 269 -23 7 1103 513 0 0 0 chr17 67988891 67988948 -27283703 + (CA)n Simple_repeat Simple_repeat 1 57 0 7 1103 22 0 0 0 chr17 67989357 67989379 -27283272 + AT_rich Low_complexity Low_complexity 1 22 0 7 1103 503 227 209 33 chr17 67989632 67989814 -27282837 + B3 SINE B2 3 216 0 7 1103 255 263 18 0 chr17 67989869 67989926 -27282725 + C-rich Low_complexity Low_complexity 1 58 0 7 1103 344 274 0 87 chr17 67989928 67990020 -27282631 - B1F SINE Alu -21 128 45 7 1103 357 162 0 51 chr17 67990753 67990870 -27281781 + GA-rich Low_complexity Low_complexity 2 112 0 7 1103 411 177 0 0 chr17 67990917 67991013 -27281638 + G-rich Low_complexity Low_complexity 5 100 0 7 1103 257 349 46 15 chr17 67991958 67992089 -27280562 - RMER15 LTR ERVL -19 556 422 7 1103 446 125 12 0 chr17 67992670 67992750 -27279901 + (TG)n Simple_repeat Simple_repeat 1 81 0 7 1103 376 239 12 0 chr17 67992774 67992937 -27279714 + (TG)n Simple_repeat Simple_repeat 2 166 0 7 1103 755 239 69 6 chr17 67993251 67993411 -27279240 - ORR1D2 LTR MaLR -200 170 1 7 1103 29 60 0 0 chr17 67993438 67993488 -27279163 + AT_rich Low_complexity Low_complexity 1 50 0 7 1103 14524 73 45 7 chr17 67993583 67995052 -27277599 + L1VL2 LINE L1 328 1860 -1755 7 1103 1038 80 51 0 chr17 67995052 67995190 -27277461 + B1_Mm SINE Alu 2 146 -1 7 1103 14524 73 17 11 chr17 67995190 67996311 -27276340 + L1VL2 LINE L1 1861 2989 -626 7 1103 640 271 40 87 chr17 67996501 67996760 -27275891 - MTE2a LTR MaLR -45 374 84 7 1103 271 250 139 0 chr17 67997179 67997251 -27275400 - MTE2a LTR MaLR -293 86 5 7 1103 2127 99 76 0 chr17 67998293 67998597 -27274054 + ORR1A2 LTR MaLR 1 327 0 7 1103 397 328 43 43 chr17 67998605 67998745 -27273906 + B1F SINE Alu 1 140 -9 7 1103 289 324 89 19 chr17 67999000 67999214 -27273437 - L2a LINE L2 -137 3289 3061 7 1103 315 105 0 0 chr17 67999370 67999427 -27273224 + (CA)n Simple_repeat Simple_repeat 2 58 0 7 1103 479 262 107 142 chr17 67999485 67999916 -27272735 + L1MA5 LINE L1 5879 6294 -6 7 1103 227 191 72 14 chr17 67999926 67999995 -27272656 - RLTR12A LTR ERVK -135 433 361 7 1103 867 253 23 59 chr17 68000001 68000304 -27272347 - RLTR12B LTR ERVK -190 338 47 1 1103 229 186 47 0 chr17 68000343 68000386 -27272265 - B3A SINE B2 -153 45 1 2 1103 232 257 13 51 chr17 68001742 68001820 -27270831 + RLTR1 LTR ERV1 299 373 -251 3 1103 568 265 7 39 chr17 68001925 68002078 -27270573 + B1_Mur1 SINE Alu 1 148 -1 4 1103 248 326 54 11 chr17 68002556 68002649 -27270002 + MLT1C LTR MaLR 330 426 -41 5 1103 238 305 174 22 chr17 68003573 68003751 -27268900 - MER110A LTR ERV1 -1 467 263 6 1103 386 322 42 8 chr17 68004024 68004143 -27268508 - Tigger5 DNA MER2_type -2281 125 3 7 1103 303 28 0 0 chr17 68004317 68004353 -27268298 + (CCA)n Simple_repeat Simple_repeat 3 38 0 8 1103 198 91 0 0 chr17 68004353 68004386 -27268265 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 9 1103 1969 162 19 0 chr17 68004477 68004797 -27267854 + ORR1A3 LTR MaLR 1 326 0 1 1103 427 263 127 35 chr17 68005260 68005457 -27267194 + B3 SINE B2 1 215 -1 1 1103 377 281 29 10 chr17 68006251 68006355 -27266296 - PB1D10 SINE Alu -8 109 4 1 1103 223 289 37 102 chr17 68006531 68006639 -27266012 + MIRc SINE MIR 64 164 -104 1 1103 269 254 0 0 chr17 68007487 68007542 -27265109 + PB1D10 SINE Alu 41 95 -22 1 1103 1840 236 75 21 chr17 68008651 68009170 -27263481 - RMER15 LTR ERVL -3 572 26 1 1103 420 205 0 17 chr17 68009318 68009492 -27263159 + CT-rich Low_complexity Low_complexity 2 172 0 1 1103 5248 40 0 31 chr17 68009647 68010296 -27262355 - L1Md_F2 LINE L1 -12 6570 5942 1 1103 375 23 0 0 chr17 68010750 68010794 -27261857 + (CATA)n Simple_repeat Simple_repeat 2 45 0 1 1103 371 21 21 0 chr17 68010831 68010879 -27261772 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 1103 235 213 24 107 chr17 68011287 68011371 -27261280 - RMER21B LTR ERV1 -112 835 759 2 1103 429 280 264 5 chr17 68011375 68011587 -27261064 - RMER21B LTR ERV1 -276 566 300 2 1103 411 346 42 47 chr17 68012089 68012304 -27260347 - Arthur1 DNA Tip100 -3696 251 38 2 1103 540 0 0 0 chr17 68012792 68012852 -27259799 + (GA)n Simple_repeat Simple_repeat 2 61 0 2 1103 419 248 35 26 chr17 68013961 68014077 -27258574 - PB1D7 SINE Alu -2 118 2 2 1103 4225 99 17 16 chr17 68014077 68014659 -27257992 + MT2B2 LTR ERVL 2 584 0 2 1103 347 271 43 54 chr17 68016028 68016210 -27256441 - MLT1C LTR MaLR -169 221 54 2 1103 423 138 0 0 chr17 68017043 68017130 -27255521 + (TG)n Simple_repeat Simple_repeat 2 88 0 2 1103 330 67 0 0 chr17 68017139 68017184 -27255467 + (TC)n Simple_repeat Simple_repeat 2 46 0 2 1103 249 174 0 0 chr17 68017183 68017252 -27255399 + (TG)n Simple_repeat Simple_repeat 2 70 0 2 1103 192 77 0 0 chr17 68017293 68017319 -27255332 + (TCCC)n Simple_repeat Simple_repeat 4 29 0 2 1103 228 122 0 0 chr17 68017321 68017362 -27255289 + (GA)n Simple_repeat Simple_repeat 1 41 0 3 1103 321 296 0 44 chr17 68018456 68018569 -27254082 - PB1D10 SINE Alu -7 110 3 3 1103 1211 68 0 0 chr17 68018981 68019129 -27253522 + B1_Mus1 SINE Alu 1 148 0 3 1103 497 272 32 8 chr17 68019173 68019299 -27253352 + B1F SINE Alu 1 129 -20 3 1103 486 269 127 7 chr17 68019461 68019611 -27253040 + MER63B DNA AcHobo 264 431 -5 3 1103 233 282 27 40 chr17 68019749 68019823 -27252828 - MIRb SINE MIR -76 192 120 3 1103 568 207 74 0 chr17 68019845 68019966 -27252685 + B3 SINE B2 1 130 -86 3 1103 181 174 32 65 chr17 68020044 68020120 -27252531 + (TA)n Simple_repeat Simple_repeat 2 75 0 3 1103 2584 86 0 0 chr17 68020120 68020447 -27252204 + ORR1A2 LTR MaLR 1 327 0 3 1103 181 174 32 65 chr17 68020447 68020555 -27252096 + (TA)n Simple_repeat Simple_repeat 2 105 0 3 1103 284 271 85 59 chr17 68021815 68021968 -27250683 + ORR1E LTR MaLR 6 162 -197 4 1103 207 0 0 0 chr17 68022273 68022296 -27250355 + (CAG)n Simple_repeat Simple_repeat 3 25 0 4 1103 3308 51 2 0 chr17 68022400 68022795 -27249856 - MTA_Mm LTR MaLR 0 396 1 4 1103 240 229 0 0 chr17 68022926 68023009 -27249642 + (TG)n Simple_repeat Simple_repeat 1 83 0 4 1103 351 335 50 5 chr17 68023316 68023535 -27249116 + L1MC3 LINE L1 7331 7559 -226 4 1103 302 270 88 20 chr17 68023623 68023725 -27248926 + L1MD3 LINE L1 7885 7993 -2 4 1103 210 71 0 0 chr17 68024258 68024286 -27248365 + (TAA)n Simple_repeat Simple_repeat 2 29 0 4 1103 1451 133 59 17 chr17 68024335 68024636 -27248015 + MTC LTR MaLR 88 419 -2 4 1103 246 273 0 0 chr17 68025549 68025604 -27247047 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1103 355 245 20 60 chr17 68025606 68025706 -27246945 + HAL1-3A_ME LINE L1 1975 2070 -788 4 1103 360 0 0 0 chr17 68025783 68025823 -27246828 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 1103 279 0 0 0 chr17 68025823 68025853 -27246798 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1104 548 247 202 36 chr17 68026922 68027170 -27245481 - L1MB3 LINE L1 -107 6076 5788 5 1104 749 285 63 24 chr17 68027175 68027427 -27245224 + MTD LTR MaLR 9 270 -149 5 1104 246 32 0 0 chr17 68027459 68027490 -27245161 + (TCTG)n Simple_repeat Simple_repeat 3 33 0 5 1104 228 172 0 0 chr17 68028342 68028400 -27244251 + A-rich Low_complexity Low_complexity 2 59 0 5 1104 1385 77 16 21 chr17 68028433 68028620 -27244031 + B2_Mm2 SINE B2 2 187 -8 5 1104 235 329 0 0 chr17 68028634 68028713 -27243938 + L1MA5 LINE L1 6197 6275 -25 5 1104 370 296 71 61 chr17 68028845 68029043 -27243608 + MLT1E2 LTR MaLR 211 410 -217 5 1104 249 260 130 0 chr17 68029055 68029178 -27243473 - L1MA5 LINE L1 -47 6253 6115 5 1104 1366 128 196 19 chr17 68029180 68029451 -27243200 + ORR1A3 LTR MaLR 1 319 -7 6 1104 371 277 188 11 chr17 68029453 68029639 -27243012 - L1MA5 LINE L1 -178 6122 5904 5 1104 288 368 0 0 chr17 68030297 68030384 -27242267 + PB1D10 SINE Alu 2 88 -29 6 1104 520 311 0 0 chr17 68030306 68030438 -27242213 + ID_B1 SINE B4 92 223 -1 6 1104 258 32 0 0 chr17 68030843 68030874 -27241777 + (T)n Simple_repeat Simple_repeat 1 31 0 6 1104 22 80 0 0 chr17 68031186 68031236 -27241415 + AT_rich Low_complexity Low_complexity 1 50 0 6 1104 4109 83 3 29 chr17 68031278 68031860 -27240791 - RMER2 LTR ERV1 0 567 1 6 1104 318 356 0 10 chr17 68032066 68032168 -27240483 - PB1D10 SINE Alu -4 113 13 6 1104 384 367 33 24 chr17 68032669 68033087 -27239564 + L1MEg LINE L1 1095 1552 -4690 6 1104 230 333 24 12 chr17 68033099 68033184 -27239467 + B4A SINE B4 163 248 -44 6 1104 465 331 41 7 chr17 68033220 68033515 -27239136 + L1MEg LINE L1 3534 3838 -2308 6 1104 233 339 95 16 chr17 68033599 68033725 -27238926 - MER2B DNA MER2_type -46 290 155 6 1104 259 322 54 22 chr17 68033715 68033807 -27238844 - MER2 DNA MER2_type -233 112 18 7 1104 637 85 19 0 chr17 68033836 68033942 -27238709 + (GGAA)n Simple_repeat Simple_repeat 2 109 0 7 1104 22 35 0 0 chr17 68034310 68034339 -27238312 + AT_rich Low_complexity Low_complexity 1 29 0 7 1104 203 246 169 0 chr17 68035264 68035329 -27237322 - L3 LINE CR1 -3505 984 909 7 1104 942 245 29 5 chr17 68035366 68035571 -27237080 - B3 SINE B2 -5 211 2 7 1104 215 293 93 47 chr17 68036224 68036310 -27236341 + PB1D10 SINE Alu 1 90 -27 7 1104 470 153 0 35 chr17 68036335 68036450 -27236201 + G-rich Low_complexity Low_complexity 2 112 0 7 1104 317 248 130 62 chr17 68036450 68036596 -27236055 + HAL1-3A_ME LINE L1 2284 2439 -419 7 1104 216 97 0 0 chr17 68037796 68037827 -27234824 + (TTGG)n Simple_repeat Simple_repeat 2 32 0 7 1104 283 296 9 75 chr17 68037827 68037923 -27234728 - PB1D10 SINE Alu -10 107 18 7 1104 201 283 0 0 chr17 68038175 68038228 -27234423 + C-rich Low_complexity Low_complexity 1 53 0 8 1104 679 340 22 41 chr17 68039420 68039687 -27232964 - MER2 DNA MER2_type -2 343 82 8 1104 236 226 113 0 chr17 68039866 68039919 -27232732 + B4A SINE B4 226 284 -8 8 1104 477 0 0 0 chr17 68040480 68040533 -27232118 + (TCTA)n Simple_repeat Simple_repeat 1 53 0 8 1104 479 233 37 37 chr17 68040543 68040677 -27231974 - B1F SINE Alu -15 134 1 8 1104 181 345 69 35 chr17 68040925 68041069 -27231582 - L2b LINE L2 -184 3191 3043 8 1104 305 247 86 0 chr17 68041258 68041339 -27231312 - L1_Mur1 LINE L1 -1389 4497 4410 8 1104 351 297 45 0 chr17 68041542 68041653 -27230998 - RSINE1 SINE B4 -34 131 16 8 1104 440 244 130 32 chr17 68041669 68041792 -27230859 + B1_Mur1 SINE Alu 5 139 -10 8 1104 343 224 35 12 chr17 68042381 68042467 -27230184 - PB1D10 SINE Alu 0 117 30 8 1104 190 189 27 0 chr17 68042641 68042678 -27229973 - MIRb SINE MIR -26 242 205 9 1104 456 19 0 0 chr17 68043087 68043140 -27229511 + (CA)n Simple_repeat Simple_repeat 2 54 0 9 1104 189 0 0 0 chr17 68043225 68043246 -27229405 + (G)n Simple_repeat Simple_repeat 1 21 0 9 1104 26 30 0 0 chr17 68043603 68043636 -27229015 + AT_rich Low_complexity Low_complexity 1 33 0 9 1104 641 108 11 0 chr17 68043642 68043735 -27228916 + BC1_Mm scRNA scRNA 1 94 -58 9 1104 388 273 15 69 chr17 68043874 68044004 -27228647 + B1F1 SINE Alu 27 149 0 9 1104 263 226 11 35 chr17 68044007 68044094 -27228557 + A-rich Low_complexity Low_complexity 2 86 0 9 1104 207 0 0 0 chr17 68044172 68044195 -27228456 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 9 1104 622 243 111 0 chr17 68045462 68045643 -27227008 - B3 SINE B2 -15 201 1 9 1104 432 0 0 0 chr17 68048330 68048378 -27224273 + (TC)n Simple_repeat Simple_repeat 2 49 0 9 1104 387 0 0 0 chr17 68048378 68048420 -27224231 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1104 433 324 19 0 chr17 68048431 68048536 -27224115 - PB1 SINE Alu -18 109 3 1 1104 307 355 32 6 chr17 68049379 68049535 -27223116 + MIR SINE MIR 94 253 -9 1 1104 454 264 62 35 chr17 68051870 68052015 -27220636 + RSINE1 SINE B4 3 151 -14 1 1104 501 229 9 0 chr17 68054011 68054116 -27218535 - PB1 SINE Alu -2 125 20 1 1104 2099 152 80 13 chr17 68054281 68054668 -27217983 + MTC LTR MaLR 1 413 -8 1 1104 438 271 23 15 chr17 68054993 68055124 -27217527 - MER5B DNA MER1_type -44 134 3 1 1104 196 20 18 105 chr17 68055487 68055544 -27217107 + (TTTTTG)n Simple_repeat Simple_repeat 2 53 0 1 1104 1270 47 0 0 chr17 68055548 68055696 -27216955 - B1_Mus1 SINE Alu 0 148 1 1 1104 439 266 27 48 chr17 68056090 68056236 -27216415 + B4A SINE B4 150 292 0 1 1104 350 313 60 28 chr17 68056493 68056710 -27215941 - L1M4 LINE L1 -1503 4643 4420 1 1104 261 0 0 0 chr17 68056724 68056753 -27215898 + (GA)n Simple_repeat Simple_repeat 1 29 0 1 1104 428 247 0 6 chr17 68056765 68056936 -27215715 + (TG)n Simple_repeat Simple_repeat 1 170 0 1 1104 426 319 47 24 chr17 68057571 68057741 -27214910 - Tigger7 DNA MER2_type -12 2479 2306 1 1104 227 256 72 12 chr17 68058263 68058346 -27214305 - MER45A DNA Tip100 -11 167 80 1 1104 404 243 18 18 chr17 68058561 68058674 -27213977 + PB1D10 SINE Alu 3 115 -2 1 1104 1167 82 0 0 chr17 68058754 68058901 -27213750 + B1_Mus1 SINE Alu 2 148 0 1 1104 252 0 0 0 chr17 68059166 68059194 -27213457 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 1104 326 296 90 42 chr17 68059272 68059438 -27213213 + B4A SINE B4 1 174 -118 1 1104 338 202 11 92 chr17 68059459 68059546 -27213105 + RSINE1 SINE B4 86 165 0 1 1104 325 336 5 5 chr17 68059546 68059776 -27212875 + (CA)n Simple_repeat Simple_repeat 1 230 0 1 1104 513 196 9 39 chr17 68060122 68060359 -27212292 + CT-rich Low_complexity Low_complexity 1 229 0 1 1104 515 264 112 47 chr17 68061290 68061541 -27211110 + B4A SINE B4 20 290 -2 1 1104 252 122 0 0 chr17 68061549 68061590 -27211061 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1104 200 200 0 0 chr17 68061628 68061668 -27210983 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1104 180 111 0 0 chr17 68062590 68062617 -27210034 + (TGGA)n Simple_repeat Simple_repeat 2 28 0 1 1104 22 0 0 0 chr17 68063113 68063135 -27209516 + AT_rich Low_complexity Low_complexity 1 22 0 1 1104 261 0 0 0 chr17 68064477 68064506 -27208145 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 1104 621 136 0 0 chr17 68064758 68064861 -27207790 + (TG)n Simple_repeat Simple_repeat 2 104 0 1 1104 368 291 91 30 chr17 68065609 68065839 -27206812 - L1ME2z LINE L1 -180 6264 6021 1 1104 287 256 13 13 chr17 68066258 68066337 -27206314 - ID4_ SINE ID 0 83 5 1 1104 239 0 32 0 chr17 68066674 68066705 -27205946 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 1104 519 286 114 42 chr17 68066777 68067040 -27205611 - L1_Rod LINE L1 -6831 341 60 1 1104 657 271 120 59 chr17 68067479 68067912 -27204739 + L1MB4 LINE L1 5317 5801 -379 1 1104 414 0 0 0 chr17 68067912 68067958 -27204693 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1104 657 270 121 59 chr17 68067958 68068049 -27204602 + L1MB4 LINE L1 5802 5915 -265 1 1104 282 273 0 25 chr17 68069186 68069265 -27203386 + (TG)n Simple_repeat Simple_repeat 2 78 0 1 1104 964 268 55 15 chr17 68069284 68069557 -27203094 - B4A SINE B4 -3 289 6 1 1104 219 323 0 0 chr17 68070036 68070135 -27202516 + C-rich Low_complexity Low_complexity 24 122 0 1 1104 777 51 0 0 chr17 68070135 68070233 -27202418 + (TTCTC)n Simple_repeat Simple_repeat 4 101 0 1 1104 534 160 47 6 chr17 68071718 68071888 -27200763 + (CA)n Simple_repeat Simple_repeat 2 178 0 1 1104 814 96 57 6 chr17 68071936 68072270 -27200381 + (CA)n Simple_repeat Simple_repeat 1 351 0 1 1104 426 175 51 10 chr17 68073154 68073252 -27199399 - B1_Mur1 SINE Alu -18 131 30 1 1104 404 313 97 29 chr17 68073411 68073618 -27199033 + B4A SINE B4 67 287 -5 1 1104 740 115 8 0 chr17 68074082 68074204 -27198447 + (GGAA)n Simple_repeat Simple_repeat 4 126 0 1 1104 296 339 130 46 chr17 68074334 68074572 -27198079 - MER2 DNA MER2_type -7 338 81 1 1104 211 262 0 15 chr17 68074899 68074965 -27197686 + C-rich Low_complexity Low_complexity 5 69 0 1 1104 243 267 157 7 chr17 68075051 68075198 -27197453 - L1M5 LINE L1 -615 5829 5661 1 1104 203 237 0 0 chr17 68075770 68075808 -27196843 + C-rich Low_complexity Low_complexity 1 38 0 1 1104 21 0 0 0 chr17 68076344 68076365 -27196286 + AT_rich Low_complexity Low_complexity 1 21 0 1 1104 408 275 148 92 chr17 68077309 68077505 -27195146 - B3A SINE B2 -6 210 4 1 1104 1039 296 23 53 chr17 68077519 68077951 -27194700 - L1MB3 LINE L1 -226 5957 5539 1 1104 479 227 73 38 chr17 68078781 68078814 -27193837 + B4 SINE B4 60 164 -128 1 1104 894 62 108 0 chr17 68078814 68078943 -27193708 + B1_Mus1 SINE Alu 6 148 0 1 1104 479 227 73 38 chr17 68078943 68078966 -27193685 + B4 SINE B4 165 246 -46 1 1104 609 124 16 32 chr17 68078969 68079094 -27193557 + GA-rich Low_complexity Low_complexity 3 125 0 1 1104 453 114 0 0 chr17 68081053 68081132 -27191519 - L1Md_F2 LINE L1 0 6582 6504 1 1104 226 174 232 0 chr17 68081858 68081927 -27190724 - MLT1B LTR MaLR -141 249 165 1 1104 592 326 11 46 chr17 68082072 68082355 -27190296 - B4 SINE B4 -18 274 2 1 1104 552 286 27 117 chr17 68082357 68082579 -27190072 - B4 SINE B4 -90 202 1 1 1104 293 270 0 92 chr17 68082614 68082712 -27189939 - MLT1B LTR MaLR -281 109 21 1 1104 342 287 0 0 chr17 68084574 68084717 -27187934 + (CA)n Simple_repeat Simple_repeat 2 144 0 1 1104 429 345 0 0 chr17 68084743 68084891 -27187760 + (CATA)n Simple_repeat Simple_repeat 3 150 0 1 1104 236 256 0 22 chr17 68084907 68084999 -27187652 + (CATA)n Simple_repeat Simple_repeat 1 90 0 1 1104 213 368 0 0 chr17 68085001 68085077 -27187574 + (CA)n Simple_repeat Simple_repeat 1 76 0 1 1104 719 300 149 29 chr17 68085449 68086149 -27186502 - L1MC2 LINE L1 -106 6238 5421 1 1104 380 333 92 5 chr17 68086566 68086783 -27185868 - L1MB1 LINE L1 -53 6115 5880 1 1104 371 205 107 12 chr17 68087340 68087424 -27185227 + PB1D10 SINE Alu 1 92 -25 1 1104 243 0 0 0 chr17 68088528 68088555 -27184096 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1104 327 311 68 29 chr17 68089540 68089713 -27182938 - B3 SINE B2 -10 185 9 1 1104 1116 125 11 49 chr17 68089813 68089998 -27182653 + B2_Mm1t SINE B2 2 179 -14 1 1104 350 158 324 27 chr17 68090044 68090155 -27182496 + B2_Mm2 SINE B2 47 190 -5 1 1104 398 322 40 67 chr17 68090309 68090562 -27182089 + L1M4 LINE L1 4154 4399 -1747 1 1104 1380 114 0 0 chr17 68090701 68091035 -27181616 + (CCCTAA)n Simple_repeat Simple_repeat 1 334 0 1 1104 21 0 0 0 chr17 68091557 68091578 -27181073 + AT_rich Low_complexity Low_complexity 1 21 0 1 1104 26 30 0 0 chr17 68092034 68092067 -27180584 + AT_rich Low_complexity Low_complexity 1 33 0 1 1104 308 366 88 10 chr17 68092089 68092191 -27180460 - RSINE1 SINE B4 -21 144 35 1 1104 203 163 0 44 chr17 68092210 68092255 -27180396 + (TTTG)n Simple_repeat Simple_repeat 1 43 0 1 1104 300 257 13 13 chr17 68092982 68093057 -27179594 - ID4 SINE ID -5 78 4 1 1104 672 253 20 14 chr17 68093063 68093211 -27179440 + RSINE1 SINE B4 4 152 -13 1 1104 299 44 22 0 chr17 68093217 68093262 -27179389 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1104 861 244 35 20 chr17 68093598 68093795 -27178856 - B3 SINE B2 -15 201 2 1 1104 954 200 103 0 chr17 68094067 68094262 -27178389 - B3 SINE B2 0 216 2 1 1104 325 231 99 36 chr17 68095685 68095796 -27176855 - L1M4 LINE L1 -450 5730 5613 1 1104 934 17 17 0 chr17 68096287 68096402 -27176249 - B1_Mus1 SINE Alu 0 148 32 1 1104 312 304 16 65 chr17 68096984 68097107 -27175544 + PB1D10 SINE Alu 1 117 0 1 1104 293 113 101 0 chr17 68098189 68098348 -27174303 + (TA)n Simple_repeat Simple_repeat 1 175 0 1 1104 200 200 36 15 chr17 68098394 68098531 -27174120 + (TA)n Simple_repeat Simple_repeat 2 141 0 1 1104 2320 170 157 13 chr17 68098768 68099234 -27173417 + RMER4B LTR ERVK 51 583 -2 1 1104 1021 103 20 0 chr17 68099235 68099381 -27173270 + B1_Mur1 SINE Alu 1 149 0 1 1104 389 70 0 17 chr17 68099618 68099641 -27173010 + (TTC)n Simple_repeat Simple_repeat 1 23 0 1 1104 1214 95 6 0 chr17 68099641 68099820 -27172831 + (TCC)n Simple_repeat Simple_repeat 1 180 0 1 1104 389 70 0 17 chr17 68099820 68099854 -27172797 + (TTC)n Simple_repeat Simple_repeat 3 36 0 1 1104 246 128 0 0 chr17 68100737 68100776 -27171875 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1104 312 305 28 19 chr17 68100815 68100922 -27171729 - PB1D10 SINE Alu -1 116 9 1 1104 509 289 19 19 chr17 68101280 68101442 -27171209 + RSINE1 SINE B4 4 165 0 1 1104 180 0 0 0 chr17 68101460 68101480 -27171171 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1 1104 529 220 30 91 chr17 68103349 68103514 -27169137 + B3A SINE B2 27 181 -17 1 1104 214 91 90 13 chr17 68103562 68103640 -27169011 + (CA)n Simple_repeat Simple_repeat 1 84 0 1 1104 305 278 140 53 chr17 68103807 68104092 -27168559 - ORSL-2b DNA Tip100 -187 321 12 1 1104 320 343 58 63 chr17 68104270 68104460 -27168191 - MER2 DNA MER2_type 0 345 157 1 1104 242 297 89 9 chr17 68104823 68104935 -27167716 + PB1 SINE Alu 5 125 -2 1 1104 215 293 86 0 chr17 68104942 68105000 -27167651 + ID4_ SINE ID 1 63 -20 1 1104 326 102 34 0 chr17 68105011 68105070 -27167581 + (CATA)n Simple_repeat Simple_repeat 3 63 0 1 1104 216 0 0 0 chr17 68106247 68106271 -27166380 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1104 186 133 0 0 chr17 68107199 68107229 -27165422 + (CACCC)n Simple_repeat Simple_repeat 3 32 0 1 1104 285 314 101 56 chr17 68107904 68108083 -27164568 - L1MC4a LINE L1 -441 7441 7255 2 1104 1493 17 0 0 chr17 68108218 68108391 -27164260 + L1Md_A LINE L1 6410 6582 0 2 1104 1562 216 157 25 chr17 68108610 68109056 -27163595 - RMER5 LTR ERV1 -9 525 21 2 1104 186 43 0 0 chr17 68109771 68109794 -27162857 + (CCCTG)n Simple_repeat Simple_repeat 3 25 0 2 1104 687 163 0 0 chr17 68109857 68109980 -27162671 + T-rich Low_complexity Low_complexity 3 125 0 2 1104 506 276 91 77 chr17 68110545 68110753 -27161898 + B3 SINE B2 2 212 -4 2 1104 295 223 0 46 chr17 68111850 68111958 -27160693 + C-rich Low_complexity Low_complexity 2 104 0 2 1104 238 306 83 0 chr17 68112046 68112154 -27160497 - MLT1A1 LTR MaLR 0 408 292 2 1104 672 67 0 0 chr17 68112489 68112579 -27160072 + (TG)n Simple_repeat Simple_repeat 1 90 0 2 1104 303 28 0 0 chr17 68112579 68112614 -27160037 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 1104 248 248 116 68 chr17 68112633 68112780 -27159871 - RLTR40 LTR ERVK -144 673 520 2 1104 315 247 75 11 chr17 68113306 68113400 -27159251 - L1MA5 LINE L1 -8 6292 6193 2 1104 2014 111 33 60 chr17 68114270 68114605 -27158046 - ORR1A3 LTR MaLR 0 326 1 2 1104 280 298 186 38 chr17 68114976 68115293 -27157358 - Lx8 LINE L1 -2 7471 7108 2 1104 250 194 0 27 chr17 68115753 68115827 -27156824 + GA-rich Low_complexity Low_complexity 4 75 0 2 1104 1311 186 0 9 chr17 68117190 68117418 -27155233 - URR1A DNA MER1_type 0 226 1 2 1104 301 301 17 30 chr17 68117902 68118016 -27154635 + PB1 SINE Alu 12 124 -3 2 1104 221 284 0 0 chr17 68118113 68118201 -27154450 + (TA)n Simple_repeat Simple_repeat 2 89 0 2 1104 621 72 0 0 chr17 68118632 68118715 -27153936 + (TC)n Simple_repeat Simple_repeat 1 83 0 2 1104 336 209 104 44 chr17 68119091 68119226 -27153425 + RLTR15 LTR ERVK 32 174 -185 2 1104 392 117 0 13 chr17 68120856 68120934 -27151717 + (TG)n Simple_repeat Simple_repeat 2 78 0 2 1104 625 181 11 0 chr17 68120946 68121123 -27151528 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 1104 748 166 14 4 chr17 68121147 68121431 -27151220 + (TG)n Simple_repeat Simple_repeat 1 287 0 2 1104 773 159 5 0 chr17 68121444 68121660 -27150991 + (TG)n Simple_repeat Simple_repeat 1 217 0 2 1104 613 309 62 97 chr17 68121661 68121951 -27150700 - B4A SINE B4 0 292 13 2 1104 216 342 0 52 chr17 68121888 68121965 -27150686 - ID2 SINE ID -10 73 1 2 1104 303 311 8 94 chr17 68122569 68122586 -27150065 - PB1D10 SINE Alu 0 117 105 2 1104 182 33 67 0 chr17 68122586 68122616 -27150035 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2 1104 303 311 8 94 chr17 68122616 68122715 -27149936 - PB1D10 SINE Alu -13 104 11 2 1104 422 338 53 26 chr17 68123372 68123524 -27149127 + Tigger7 DNA MER2_type 1 156 -2335 2 1104 744 12 0 0 chr17 68123527 68123612 -27149039 + (CCCTG)n Simple_repeat Simple_repeat 4 88 0 2 1104 703 298 116 49 chr17 68124154 68124482 -27148169 - ORR1E LTR MaLR -7 352 3 2 1104 434 283 160 23 chr17 68125491 68125835 -27146816 - L1MB3 LINE L1 -208 5975 5585 2 1104 321 285 122 0 chr17 68125978 68126099 -27146552 - B1F SINE Alu -3 146 1 2 1104 1732 127 74 28 chr17 68127152 68127476 -27145175 - Lx2B LINE L1 0 7000 6662 2 1104 326 68 40 26 chr17 68127476 68127552 -27145099 + (TTTTG)n Simple_repeat Simple_repeat 5 81 0 2 1104 780 280 145 22 chr17 68127723 68128041 -27144610 - ORR1E LTR MaLR -2 357 1 2 1104 340 279 27 55 chr17 68130612 68130722 -27141929 - PB1D10 SINE Alu -10 107 1 2 1104 236 246 0 0 chr17 68132164 68132229 -27140422 + (CTCA)n Simple_repeat Simple_repeat 4 68 0 2 1104 458 229 6 0 chr17 68132232 68132411 -27140240 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 1104 200 154 19 0 chr17 68132458 68132510 -27140141 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 1104 1192 181 0 39 chr17 68133901 68134131 -27138520 + URR1B DNA MER1_type 5 225 0 2 1104 270 0 0 0 chr17 68135969 68135999 -27136652 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2 1104 214 239 0 0 chr17 68136205 68136251 -27136400 + CT-rich Low_complexity Low_complexity 3 48 0 2 1104 192 125 0 0 chr17 68136255 68136287 -27136364 + (TCTCCC)n Simple_repeat Simple_repeat 3 34 0 2 1104 220 198 337 24 chr17 68136325 68136408 -27136243 - PB1D10 SINE Alu 0 117 9 2 1104 347 252 188 36 chr17 68137588 68137753 -27134898 - MER68 LTR ERVL -192 371 182 2 1104 750 165 0 131 chr17 68138475 68138628 -27134023 + B1_Mur1 SINE Alu 17 149 0 2 1104 643 204 22 15 chr17 68139030 68139164 -27133487 - MTC LTR MaLR 0 421 287 2 1104 264 170 0 0 chr17 68139211 68139264 -27133387 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1104 296 311 0 78 chr17 68139330 68139445 -27133206 + PB1D7 SINE Alu 8 113 -7 2 1104 1317 75 53 0 chr17 68139532 68139719 -27132932 - L1_Mus3 LINE L1 -1 6637 6441 2 1104 631 0 0 0 chr17 68139719 68139787 -27132864 - Lx2 LINE L1 -1216 5781 5714 2 1104 2616 64 12 0 chr17 68139787 68140115 -27132536 + Lx2 LINE L1 5368 5699 -184 2 1104 342 0 0 0 chr17 68141102 68141140 -27131511 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1104 554 277 35 28 chr17 68141149 68141290 -27131361 - B4 SINE B4 0 292 151 2 1104 235 297 74 83 chr17 68141292 68141413 -27131238 - PB1D10 SINE Alu -25 122 3 2 1104 473 255 86 98 chr17 68141413 68141440 -27131211 - B4 SINE B4 -191 101 73 2 1104 2452 53 88 3 chr17 68141440 68141759 -27130892 - ORR1A1 LTR MaLR 0 346 1 2 1104 473 255 86 98 chr17 68141759 68141828 -27130823 - B4 SINE B4 -220 72 7 2 1104 459 0 0 0 chr17 68142181 68142232 -27130419 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1104 475 252 39 31 chr17 68142304 68142431 -27130220 - B1F SINE Alu 0 149 22 2 1104 217 0 0 57 chr17 68142560 68142595 -27130056 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 2 1104 1222 160 28 14 chr17 68143741 68143957 -27128694 + URR1B DNA MER1_type 7 225 0 2 1104 486 300 36 85 chr17 68143957 68144088 -27128563 - CYRA11_Mm Unknown Y-chromosome -447 170 55 2 1104 256 298 29 78 chr17 68144106 68144208 -27128443 - PB1 SINE Alu -7 120 24 2 1104 309 296 45 60 chr17 68146923 68147056 -27125595 - B1F1 SINE Alu -18 131 1 2 1104 428 243 74 34 chr17 68147401 68147550 -27125101 + RSINE1 SINE B4 2 156 -9 2 1104 701 225 26 14 chr17 68149498 68149654 -27122997 + B3A SINE B2 2 157 -41 2 1104 372 43 0 0 chr17 68149654 68149700 -27122951 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1104 466 296 15 64 chr17 68149700 68149745 -27122906 + B2_Mm2 SINE B2 149 192 -3 2 1104 380 192 93 75 chr17 68149767 68149874 -27122777 + PB1D10 SINE Alu 8 116 -1 2 1104 2335 174 77 16 chr17 68150370 68150866 -27121785 - RLTR11A LTR ERVK 0 528 3 2 1104 755 257 37 23 chr17 68150907 68151122 -27121529 + B4 SINE B4 1 218 -74 2 1104 2960 87 7 2 chr17 68151122 68151535 -27121116 - BGLII LTR ERVK -6 415 1 2 1104 637 211 199 6 chr17 68152595 68152771 -27119880 - B3 SINE B2 -6 210 1 2 1104 780 267 43 52 chr17 68152907 68153235 -27119416 - RLTR15 LTR ERVK -21 338 14 2 1104 411 56 0 0 chr17 68153654 68153708 -27118943 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 1104 259 398 0 18 chr17 68154357 68154378 -27118273 + ID SINE ID 63 81 -143 2 1104 417 280 27 45 chr17 68154378 68154490 -27118161 + PB1D7 SINE Alu 1 110 -10 2 1104 201 39 0 0 chr17 68154664 68154690 -27117961 + (TTTG)n Simple_repeat Simple_repeat 4 29 0 2 1104 579 202 39 0 chr17 68155904 68156008 -27116643 + PB1D9 SINE Alu 1 108 -12 2 1104 253 179 25 37 chr17 68156009 68156090 -27116561 + (TAGA)n Simple_repeat Simple_repeat 4 83 0 2 1104 378 74 0 0 chr17 68156319 68156373 -27116278 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 1104 225 65 0 0 chr17 68156804 68156835 -27115816 + (T)n Simple_repeat Simple_repeat 1 31 0 2 17 341 294 42 112 chr17 68157339 68157580 -27115071 - RMER15 LTR ERVL -16 559 336 2 1105 1342 176 0 0 chr17 68157975 68158191 -27114460 - B3 SINE B2 0 216 1 2 1105 227 288 27 14 chr17 68162057 68162131 -27110520 - ID4_ SINE ID -6 77 3 2 1105 1943 160 12 88 chr17 68165670 68166088 -27106563 - ORR1B1 LTR MaLR -8 386 1 2 1105 282 186 102 0 chr17 68167234 68167293 -27105358 + B4A SINE B4 84 148 -144 2 1105 364 316 0 10 chr17 68167246 68167342 -27105309 + PB1D10 SINE Alu 17 111 -6 2 1105 405 222 60 77 chr17 68167648 68167765 -27104886 + PB1D10 SINE Alu 3 117 0 2 1105 241 292 0 70 chr17 68168504 68168633 -27104018 - L1ME1 LINE L1 -99 6080 5961 2 1105 328 326 0 50 chr17 68168863 68168963 -27103688 + RSINE1 SINE B4 2 96 -69 2 1105 196 30 61 0 chr17 68169313 68169346 -27103305 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1105 35 0 0 0 chr17 68169416 68169451 -27103200 + AT_rich Low_complexity Low_complexity 1 35 0 2 1105 277 291 279 63 chr17 68169719 68170009 -27102642 + RMER10A LTR ERVL 12 364 -78 2 1105 1145 229 108 33 chr17 68170108 68170442 -27102209 - MLT1B LTR MaLR -30 360 2 2 1105 237 281 8 38 chr17 68172564 68172697 -27099954 + L1MEa LINE L1 734 862 -5208 2 1105 617 228 14 14 chr17 68172700 68172847 -27099804 - B1_Mur2 SINE Alu -1 148 2 2 1105 736 279 117 21 chr17 68172879 68173263 -27099388 + L1M2 LINE L1 3982 4402 -1741 2 1105 1091 58 0 0 chr17 68173406 68173543 -27099108 + B1_Mus2 SINE Alu 2 138 -9 2 1105 558 0 0 0 chr17 68173543 68173605 -27099046 + (CAAAC)n Simple_repeat Simple_repeat 2 63 0 2 1105 451 68 0 0 chr17 68173605 68173664 -27098987 + B1_Mus2 SINE Alu 88 146 -1 2 1105 638 47 12 0 chr17 68173677 68173763 -27098888 + (GAAA)n Simple_repeat Simple_repeat 2 88 0 2 1105 447 274 50 107 chr17 68173809 68174005 -27098646 + L1M2 LINE L1 4512 4681 -1462 2 1105 479 232 82 92 chr17 68174005 68174200 -27098451 - B3A SINE B2 -4 194 2 2 1105 447 274 50 107 chr17 68174200 68174301 -27098350 + L1M2 LINE L1 4682 4792 -1351 2 1105 1737 190 121 10 chr17 68174318 68174706 -27097945 - BGLII_B LTR ERVK -10 431 1 2 1105 338 283 44 18 chr17 68174707 68174884 -27097767 + L1M2 LINE L1 4801 4957 -890 2 1105 291 146 55 0 chr17 68175032 68175087 -27097564 - B2_Mm2 SINE B2 -137 58 1 2 1105 238 335 106 49 chr17 68175087 68175251 -27097400 + MIRb SINE MIR 53 231 -37 2 1105 398 20 20 0 chr17 68176544 68176595 -27096056 + (TGG)n Simple_repeat Simple_repeat 3 54 0 3 1105 1028 236 39 82 chr17 68176792 68177074 -27095577 + MTD LTR MaLR 4 273 -146 3 1105 303 266 20 80 chr17 68177143 68177294 -27095357 - RLTR10A LTR ERVK -123 288 147 3 1105 448 242 58 42 chr17 68177341 68177491 -27095160 + MTD LTR MaLR 252 400 -21 3 1105 3041 21 0 0 chr17 68177888 68178225 -27094426 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 1105 29493 15 1 2 chr17 68178225 68181464 -27091187 - IAPEz-int LTR ERVK 0 6481 3244 3 1105 22157 40 35 14 chr17 68181456 68184145 -27088506 - IAPEz-int LTR ERVK -3730 2751 8 3 1105 3027 24 0 0 chr17 68184145 68184482 -27088169 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 1105 480 333 91 54 chr17 68185500 68185776 -27086875 - B4A SINE B4 -6 286 1 3 1105 269 278 85 28 chr17 68185924 68186102 -27086549 + RMER15 LTR ERVL 90 369 -206 3 1105 194 248 110 90 chr17 68187212 68187367 -27085284 + L3 LINE CR1 778 935 -3554 3 1105 195 125 0 0 chr17 68187532 68187572 -27085079 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 3 1105 2654 52 35 3 chr17 68187631 68187979 -27084672 + L1_Mus3 LINE L1 6280 6638 0 3 1105 258 106 0 0 chr17 68188168 68188215 -27084436 + (A)n Simple_repeat Simple_repeat 1 47 0 3 1105 346 261 88 44 chr17 68188236 68188294 -27084357 - L1MD LINE L1 -927 5432 5372 3 1105 1002 247 138 15 chr17 68188294 68188627 -27084024 + ORR1D1 LTR MaLR 1 374 0 3 1105 346 261 88 44 chr17 68188627 68188728 -27083923 - L1MD LINE L1 -988 5371 5266 3 1105 456 315 65 69 chr17 68188775 68189280 -27083371 - L1M2 LINE L1 -915 5228 4709 3 1105 1222 118 36 0 chr17 68189336 68189531 -27083120 - L1_Mur2 LINE L1 -1822 4055 3854 3 1105 424 191 25 50 chr17 68189530 68189651 -27083000 - L1_Mur2 LINE L1 -6076 1010 893 3 1105 277 287 135 13 chr17 68189922 68190233 -27082418 - L1M5 LINE L1 -1469 4677 4329 3 1105 432 194 53 29 chr17 68190509 68190679 -27081972 + (TG)n Simple_repeat Simple_repeat 1 174 0 3 1105 450 238 46 11 chr17 68190738 68190912 -27081739 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1105 363 238 73 6 chr17 68190922 68191140 -27081511 + (TG)n Simple_repeat Simple_repeat 1 232 0 3 1105 459 250 46 6 chr17 68191166 68191339 -27081312 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1105 277 350 20 20 chr17 68191340 68191439 -27081212 - B4A SINE B4 -187 105 7 3 1105 219 69 0 0 chr17 68192197 68192226 -27080425 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 1105 213 214 0 111 chr17 68195182 68195245 -27077406 + B4 SINE B4 16 71 -221 3 1105 1347 103 6 0 chr17 68195253 68195607 -27077044 + (GA)n Simple_repeat Simple_repeat 1 356 0 3 1105 453 134 31 10 chr17 68195639 68195737 -27076914 + GA-rich Low_complexity Low_complexity 4 103 0 3 1105 349 167 83 125 chr17 68195763 68195813 -27076838 + L1_Rod LINE L1 1385 1440 -4407 3 1105 243 0 0 0 chr17 68195813 68195840 -27076811 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1105 401 198 58 93 chr17 68195840 68196028 -27076623 + L1_Rod LINE L1 1922 2097 -3750 3 1105 3152 232 86 23 chr17 68196051 68196927 -27075724 + Lx9 LINE L1 6713 7643 -1 3 1105 182 217 11 88 chr17 68197411 68197502 -27075149 - L2 LINE L2 -1440 1979 1896 3 1105 272 100 25 0 chr17 68198631 68198671 -27073980 - L1M5 LINE L1 -1227 4919 4879 3 1105 189 0 0 0 chr17 68198692 68198713 -27073938 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 3 1105 500 259 48 41 chr17 68199127 68199272 -27073379 - RSINE1 SINE B4 -17 148 3 3 1105 1139 140 28 6 chr17 68200099 68200279 -27072372 + B2_Mm2 SINE B2 8 191 -4 3 1105 261 57 0 0 chr17 68200431 68200466 -27072185 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1105 252 250 19 124 chr17 68200704 68200761 -27071890 - L1MD1 LINE L1 -80 6162 6111 3 1105 3218 56 2 5 chr17 68200761 68201158 -27071493 - MTA_Mm LTR MaLR 0 396 1 3 1105 252 250 19 124 chr17 68201158 68201205 -27071446 - L1MD1 LINE L1 -132 6110 6069 3 1105 533 287 51 46 chr17 68201855 68202052 -27070599 + B3A SINE B2 1 198 0 3 1105 198 195 26 13 chr17 68202666 68202744 -27069907 + (TA)n Simple_repeat Simple_repeat 1 79 0 3 1105 267 31 0 0 chr17 68202846 68202878 -27069773 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1105 464 211 60 110 chr17 68202922 68203140 -27069511 + MLT1C LTR MaLR 19 225 -165 3 1105 499 358 46 21 chr17 68203216 68203459 -27069192 + MLT1C LTR MaLR 262 501 -4 3 1105 320 292 56 9 chr17 68203901 68204008 -27068643 + PB1D9 SINE Alu 2 113 -7 3 1105 520 219 0 8 chr17 68204083 68204341 -27068310 + (CA)n Simple_repeat Simple_repeat 1 255 0 3 1105 558 207 0 0 chr17 68204418 68204597 -27068054 + (CA)n Simple_repeat Simple_repeat 2 180 0 3 1105 450 0 0 0 chr17 68204698 68204748 -27067903 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1105 300 338 35 7 chr17 68204874 68205017 -27067634 + L1MC LINE L1 5556 5702 -2180 3 1105 259 246 31 0 chr17 68205259 68205324 -27067327 + ID4_ SINE ID 7 73 -10 3 1105 379 220 107 33 chr17 68205812 68205934 -27066717 - L1MEg LINE L1 -4107 1977 1847 3 1105 1256 27 7 0 chr17 68205953 68206099 -27066552 + B1_Mm SINE Alu 1 147 0 3 1105 1438 228 28 31 chr17 68206147 68206505 -27066146 - ORR1E LTR MaLR 0 359 3 3 1105 771 301 157 13 chr17 68207048 68207348 -27065303 - MER2 DNA MER2_type -2 343 1 3 1105 296 305 0 40 chr17 68208241 68208340 -27064311 - PB1D10 SINE Alu -22 95 1 3 1105 288 77 0 0 chr17 68208561 68208600 -27064051 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1105 491 278 91 46 chr17 68208611 68208932 -27063719 - B4A SINE B4 -4 288 1 3 1105 213 175 0 0 chr17 68209290 68209330 -27063321 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1105 322 202 20 143 chr17 68209606 68209728 -27062923 - PB1D10 SINE Alu 0 127 12 3 1105 205 351 32 11 chr17 68211131 68211226 -27061425 + MIR SINE MIR 165 261 -1 3 1105 387 0 0 0 chr17 68211621 68211664 -27060987 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1105 552 210 8 14 chr17 68212395 68212758 -27059893 + (CA)n Simple_repeat Simple_repeat 1 360 0 3 1105 323 205 8 0 chr17 68212769 68212859 -27059792 + (CA)n Simple_repeat Simple_repeat 1 91 0 3 1105 3048 35 0 0 chr17 68212859 68213205 -27059446 + ORR1A1 LTR MaLR 1 346 0 3 1105 323 205 8 0 chr17 68213205 68213231 -27059420 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 1105 466 279 29 0 chr17 68213402 68213574 -27059077 + L1MEf LINE L1 730 906 -5294 3 1105 267 31 0 0 chr17 68214508 68214540 -27058111 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1105 232 311 33 11 chr17 68214969 68215060 -27057591 + B1F SINE Alu 56 148 -1 3 1105 536 168 8 0 chr17 68215060 68215185 -27057466 + (CCAA)n Simple_repeat Simple_repeat 4 129 0 3 1105 207 0 0 0 chr17 68215318 68215341 -27057310 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3 1105 1218 48 0 0 chr17 68216839 68216984 -27055667 + B1_Mus2 SINE Alu 2 146 -1 3 1105 339 160 0 0 chr17 68216991 68217066 -27055585 + A-rich Low_complexity Low_complexity 1 75 0 3 1105 225 0 0 0 chr17 68217603 68217628 -27055023 + (A)n Simple_repeat Simple_repeat 1 25 0 3 1105 1391 197 50 100 chr17 68217847 68218248 -27054403 + ORR1C2 LTR MaLR 3 383 -1 3 1105 219 65 0 0 chr17 68218425 68218450 -27054201 + (TAA)n Simple_repeat Simple_repeat 1 25 0 3 1105 288 0 0 0 chr17 68218450 68218482 -27054169 + (GAA)n Simple_repeat Simple_repeat 2 33 0 3 1105 194 232 0 28 chr17 68218894 68218965 -27053686 + (ATGGTG)n Simple_repeat Simple_repeat 4 72 0 3 1105 225 83 0 0 chr17 68219350 68219386 -27053265 + (A)n Simple_repeat Simple_repeat 1 36 0 3 1105 532 325 16 12 chr17 68219806 68220012 -27052639 + B3A SINE B2 1 212 -4 3 1105 380 129 0 23 chr17 68220098 68220185 -27052466 + Lx4A LINE L1 6974 7058 0 3 1105 291 54 0 0 chr17 68220194 68220231 -27052420 + (TAA)n Simple_repeat Simple_repeat 1 37 0 3 1105 24 32 0 0 chr17 68220244 68220275 -27052376 + AT_rich Low_complexity Low_complexity 1 31 0 3 1105 21 0 0 0 chr17 68220350 68220371 -27052280 + AT_rich Low_complexity Low_complexity 1 21 0 3 1105 267 103 0 0 chr17 68220375 68220414 -27052237 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1105 612 185 8 32 chr17 68220585 68220708 -27051943 + PB1D9 SINE Alu 1 120 0 3 1105 359 263 34 26 chr17 68222020 68222137 -27050514 - B4A SINE B4 -173 119 2 3 1105 1090 58 14 0 chr17 68222667 68222806 -27049845 + B1_Mm SINE Alu 1 141 -6 3 1105 195 42 0 0 chr17 68222814 68222838 -27049813 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1105 216 0 0 0 chr17 68222983 68223007 -27049644 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1105 339 275 15 77 chr17 68225486 68225616 -27047035 + B1F2 SINE Alu 2 123 -26 3 1105 426 187 0 0 chr17 68225646 68225721 -27046930 + B1F SINE Alu 67 141 -8 3 1105 1105 73 11 22 chr17 68225877 68226058 -27046593 + (GGAGA)n Simple_repeat Simple_repeat 1 179 0 3 1105 750 78 65 6 chr17 68226066 68226234 -27046417 + (GGA)n Simple_repeat Simple_repeat 2 179 0 3 1105 373 252 30 0 chr17 68226234 68226333 -27046318 + GA-rich Low_complexity Low_complexity 1 102 0 3 1105 401 36 18 0 chr17 68228221 68228276 -27044375 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 1105 706 73 16 24 chr17 68228285 68228411 -27044240 + (TCTCC)n Simple_repeat Simple_repeat 2 126 0 3 1105 1071 116 0 0 chr17 68228420 68228567 -27044084 - B1_Mus1 SINE Alu 0 148 2 3 1105 247 259 0 0 chr17 68230154 68230212 -27042439 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 1105 802 318 4 33 chr17 68230216 68230489 -27042162 - B4 SINE B4 0 292 28 3 1105 351 212 129 0 chr17 68231289 68231374 -27041277 + PB1D7 SINE Alu 6 101 -19 3 1105 711 180 0 0 chr17 68231376 68231526 -27041125 + (TA)n Simple_repeat Simple_repeat 2 151 0 3 1105 207 194 0 0 chr17 68233763 68233799 -27038852 + GA-rich Low_complexity Low_complexity 5 40 0 3 1105 1510 149 185 5 chr17 68234600 68234990 -27037661 + RMER4A LTR ERVK 6 465 -1 3 1105 330 264 37 37 chr17 68235228 68235362 -27037289 - L1MA4 LINE L1 -382 5918 5785 3 1105 180 0 0 0 chr17 68235821 68235841 -27036810 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 3 1105 351 289 11 0 chr17 68235984 68236074 -27036577 + ID_B1 SINE B4 126 216 -8 3 1105 1203 47 0 0 chr17 68238343 68238493 -27034158 + (CA)n Simple_repeat Simple_repeat 2 151 0 3 1105 226 73 49 0 chr17 68239724 68239765 -27032886 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 1105 4929 9 0 14 chr17 68240199 68240767 -27031884 + L1Md_A LINE L1 5027 5586 -297 3 1105 9239 1 0 0 chr17 68240767 68241763 -27030888 + L1Md_A LINE L1 5587 6582 0 3 1105 514 268 57 32 chr17 68241800 68241958 -27030693 + RSINE1 SINE B4 3 164 -1 4 1105 231 203 0 0 chr17 68241993 68242052 -27030599 + (CA)n Simple_repeat Simple_repeat 1 59 0 4 1105 222 279 16 0 chr17 68242081 68242142 -27030509 + (CATG)n Simple_repeat Simple_repeat 3 64 0 4 1105 327 322 20 13 chr17 68242238 68242389 -27030262 + GA-rich Low_complexity Low_complexity 2 153 0 4 1105 230 275 127 9 chr17 68242973 68243083 -27029568 - ORR1E LTR MaLR -1 378 256 4 1105 353 264 61 25 chr17 68243135 68243298 -27029353 - ORR1E LTR MaLR -180 179 11 4 1105 376 278 159 0 chr17 68243696 68243872 -27028779 - MER3 DNA MER1_type -4 205 2 4 1105 1253 181 47 116 chr17 68244030 68244374 -27028277 + ORR1C2 LTR MaLR 64 383 -1 4 1105 315 0 0 0 chr17 68244948 68244983 -27027668 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 4 1105 241 221 14 56 chr17 68245717 68245789 -27026862 - PB1D10 SINE Alu -21 96 28 4 1105 207 0 0 0 chr17 68245869 68245892 -27026759 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1105 434 323 156 12 chr17 68246203 68246650 -27026001 + MER54A LTR ERVL 21 560 -341 4 1105 547 264 0 6 chr17 68246735 68246891 -27025760 + MER54A LTR ERVL 737 891 -10 4 1105 1474 63 21 0 chr17 68247557 68247747 -27024904 + B2_Mm2 SINE B2 1 194 -1 4 1105 2354 81 3 58 chr17 68248110 68248452 -27024199 + ORR1A2 LTR MaLR 5 327 0 4 1105 268 309 60 40 chr17 68248920 68249119 -27023532 + MLT1C LTR MaLR 256 458 -9 4 1105 207 0 0 0 chr17 68249336 68249359 -27023292 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 4 1105 385 256 48 10 chr17 68249363 68249471 -27023180 - B1F1 SINE Alu -54 95 3 4 1105 242 204 0 0 chr17 68250309 68250358 -27022293 + C-rich Low_complexity Low_complexity 2 50 0 4 1105 189 0 0 0 chr17 68250639 68250660 -27021991 + (CAG)n Simple_repeat Simple_repeat 1 21 0 4 1105 417 86 0 0 chr17 68250896 68250954 -27021697 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 1105 25 51 0 0 chr17 68251098 68251137 -27021514 + AT_rich Low_complexity Low_complexity 1 39 0 4 1105 230 116 23 0 chr17 68251419 68251462 -27021189 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 4 1105 223 261 0 0 chr17 68251592 68251638 -27021013 + ID4_ SINE ID 26 71 -12 4 1105 392 269 183 35 chr17 68251650 68251668 -27020983 + L1MB3 LINE L1 5815 5831 -352 4 1105 1343 85 21 5 chr17 68251668 68251858 -27020793 + B2_Mm2 SINE B2 2 194 -1 4 1105 392 269 183 35 chr17 68251858 68252128 -27020523 + L1MB3 LINE L1 5832 6146 -37 4 1105 27 0 0 0 chr17 68253320 68253347 -27019304 + AT_rich Low_complexity Low_complexity 1 27 0 4 1105 1014 155 126 6 chr17 68253348 68253530 -27019121 - B3 SINE B2 -11 205 2 4 1105 201 74 0 0 chr17 68255244 68255271 -27017380 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 4 1105 576 318 30 74 chr17 68256479 68256775 -27015876 + B4 SINE B4 1 283 -9 4 1105 245 374 29 6 chr17 68257496 68257671 -27014980 + MIR SINE MIR 11 189 -73 4 1105 270 208 86 49 chr17 68257954 68258035 -27014616 + MLT1J LTR MaLR 217 300 -212 4 1105 262 321 0 13 chr17 68258776 68258855 -27013796 + MER47A DNA MER2_type 1 78 -288 4 1105 229 299 168 40 chr17 68258857 68258958 -27013693 + PB1D10 SINE Alu 2 115 -2 4 1105 316 248 99 15 chr17 68259319 68259450 -27013201 - Tigger5 DNA MER2_type -113 2293 2152 4 1105 213 196 0 0 chr17 68259791 68259847 -27012804 + GA-rich Low_complexity Low_complexity 3 58 0 4 1105 303 28 0 0 chr17 68260226 68260262 -27012389 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1105 396 0 0 0 chr17 68260430 68260474 -27012177 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1105 1026 158 87 24 chr17 68260599 68260807 -27011844 + URR1A DNA MER1_type 6 226 0 4 1105 652 287 84 24 chr17 68262063 68262395 -27010256 + ORR1E LTR MaLR 8 359 0 4 1105 1185 35 0 0 chr17 68262469 68262614 -27010037 - L1Md_A LINE L1 -2 6580 6436 4 1105 5560 33 0 0 chr17 68263614 68264257 -27008394 - L1Md_T LINE L1 0 6582 5940 4 1105 1197 21 0 0 chr17 68264375 68264519 -27008132 + (TG)n Simple_repeat Simple_repeat 1 144 0 4 1105 870 215 15 35 chr17 68266637 68266839 -27005812 - B3 SINE B2 -15 201 4 4 1105 236 218 269 29 chr17 68269059 68269234 -27003417 + L1MEc LINE L1 697 913 -5487 4 1105 284 250 42 0 chr17 68269404 68269500 -27003151 + PB1D7 SINE Alu 7 106 -14 4 1105 263 248 104 86 chr17 68269552 68269715 -27002936 + L1MEc LINE L1 1414 1631 -4784 4 1105 7110 70 81 4 chr17 68269740 68270889 -27001762 - L1_Mus3 LINE L1 0 6638 5461 4 1105 2890 127 0 4 chr17 68270875 68271325 -27001326 + L1_Mus3 LINE L1 4990 5437 -446 4 1105 364 233 54 54 chr17 68271361 68271529 -27001122 + L1MEc LINE L1 1652 1819 -4581 4 1105 392 296 9 0 chr17 68271760 68271868 -27000783 - PB1 SINE Alu -17 110 2 4 1105 394 242 196 18 chr17 68271874 68272042 -27000609 - L1MA5A LINE L1 -37 6260 6063 4 1105 665 295 123 3 chr17 68272045 68272280 -27000371 + L1MEc LINE L1 3485 3741 -2578 4 1105 233 29 29 0 chr17 68272280 68272314 -27000337 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1105 665 295 123 3 chr17 68272314 68272428 -27000223 + L1MEc LINE L1 3742 3874 -2445 4 1105 301 320 103 11 chr17 68272844 68273018 -26999633 + L1MEc LINE L1 4244 4433 -1886 4 1105 605 137 140 14 chr17 68273066 68273205 -26999446 + B2_Mm2 SINE B2 3 163 -53 4 1105 252 0 0 0 chr17 68273222 68273250 -26999401 + (CATA)n Simple_repeat Simple_repeat 4 31 0 4 1105 638 276 92 28 chr17 68273260 68273650 -26999001 + L1MEc LINE L1 4448 4873 -1446 4 1105 232 234 0 0 chr17 68273765 68273812 -26998839 + L1MC LINE L1 4899 4945 -1201 4 1105 189 0 0 0 chr17 68273858 68273879 -26998772 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1105 601 294 45 39 chr17 68273902 68274188 -26998463 + B4A SINE B4 3 290 -2 4 1105 425 148 12 0 chr17 68274202 68274283 -26998368 + (CA)n Simple_repeat Simple_repeat 1 82 0 4 1105 396 223 43 35 chr17 68274343 68274459 -26998192 + PB1D10 SINE Alu 1 117 0 4 1105 492 18 0 0 chr17 68274562 68274619 -26998032 + (TTTC)n Simple_repeat Simple_repeat 2 58 0 4 1105 1079 78 0 21 chr17 68274620 68274765 -26997886 - B1_Mus2 SINE Alu -4 143 2 4 1105 1173 71 0 0 chr17 68274887 68275028 -26997623 + B1_Mus1 SINE Alu 3 143 -5 4 1105 333 0 0 0 chr17 68275171 68275208 -26997443 + (GA)n Simple_repeat Simple_repeat 2 38 0 4 1105 207 0 0 0 chr17 68275302 68275325 -26997326 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 4 1105 2389 52 0 34 chr17 68275328 68275648 -26997003 - L1_Mus2 LINE L1 0 6566 6258 4 1105 733 177 8 0 chr17 68275648 68275778 -26996873 + URR1B DNA MER1_type 11 141 -84 4 1105 360 45 0 0 chr17 68275778 68275822 -26996829 - L1Md_T LINE L1 -428 6154 6111 4 1105 3302 52 0 7 chr17 68275822 68276230 -26996421 + L1Md_F2 LINE L1 6165 6569 -13 4 1105 468 128 116 0 chr17 68276230 68276316 -26996335 + URR1B DNA MER1_type 130 225 0 4 1105 243 360 18 18 chr17 68276390 68276503 -26996148 - PB1D7 SINE Alu -5 115 3 4 1105 301 300 0 0 chr17 68277419 68277509 -26995142 + (TG)n Simple_repeat Simple_repeat 1 90 0 4 1105 566 251 6 0 chr17 68278754 68278933 -26993718 + (TA)n Simple_repeat Simple_repeat 1 180 0 4 1105 790 244 28 0 chr17 68279193 68279369 -26993282 + B4A SINE B4 112 292 0 4 1105 494 201 0 22 chr17 68279392 68279575 -26993076 + (CA)n Simple_repeat Simple_repeat 1 179 0 4 1105 458 196 9 0 chr17 68279587 68279813 -26992838 + (CA)n Simple_repeat Simple_repeat 1 228 0 4 1105 626 193 87 22 chr17 68280256 68280394 -26992257 + B1_Mur2 SINE Alu 1 147 -2 4 1105 297 0 0 0 chr17 68281164 68281197 -26991454 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 1105 870 265 52 4 chr17 68281237 68281506 -26991145 - B4A SINE B4 -9 283 2 4 1105 279 192 0 0 chr17 68281633 68281685 -26990966 - MTC LTR MaLR 0 419 368 4 1105 468 140 0 0 chr17 68281685 68281792 -26990859 + (A)n Simple_repeat Simple_repeat 1 107 0 4 1105 732 181 138 49 chr17 68281794 68281998 -26990653 - MTC LTR MaLR -45 376 151 4 1105 403 264 78 59 chr17 68281993 68282280 -26990371 - MT2B LTR ERVL -308 225 2 4 1105 674 336 50 25 chr17 68283393 68283516 -26989135 + B4A SINE B4 1 125 -167 4 1105 2425 78 16 6 chr17 68283516 68283839 -26988812 - ORR1A2 LTR MaLR 0 327 2 4 1105 674 336 50 25 chr17 68283839 68283996 -26988655 + B4A SINE B4 126 288 -4 4 1105 294 29 0 0 chr17 68284023 68284058 -26988593 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1105 797 243 24 0 chr17 68284645 68284851 -26987800 + B3 SINE B2 1 211 -5 4 1105 1097 83 0 6 chr17 68285406 68285563 -26987088 + B2_Mm2 SINE B2 9 164 -31 4 1105 26 0 0 0 chr17 68286771 68286797 -26985854 + AT_rich Low_complexity Low_complexity 1 26 0 4 1105 234 105 0 0 chr17 68287368 68287406 -26985245 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 4 1105 198 333 60 15 chr17 68288035 68288102 -26984549 + L2a LINE L2 3315 3384 -42 4 1106 387 135 18 55 chr17 68289085 68289213 -26983438 + B1_Mm SINE Alu 22 141 -9 4 1106 586 185 15 0 chr17 68289507 68289642 -26983009 + (TA)n Simple_repeat Simple_repeat 1 137 0 4 1106 642 275 120 40 chr17 68289732 68290031 -26982620 - MER2 DNA MER2_type -22 323 1 4 1106 492 188 22 0 chr17 68290043 68290181 -26982470 + (CATA)n Simple_repeat Simple_repeat 4 144 0 4 1106 453 265 85 8 chr17 68290241 68290359 -26982292 + PB1 SINE Alu 1 127 0 4 1106 4444 76 7 20 chr17 68290649 68291241 -26981410 + MT2B2 LTR ERVL 1 584 0 4 1106 212 314 0 0 chr17 68292469 68292520 -26980131 + (TCTG)n Simple_repeat Simple_repeat 4 54 0 4 1106 322 269 0 2 chr17 68292523 68292596 -26980055 - ID4_ SINE ID -73 79 8 4 1106 613 274 121 0 chr17 68293176 68293366 -26979285 + B4 SINE B4 76 288 -4 4 1106 204 97 0 0 chr17 68293370 68293401 -26979250 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 1106 4960 61 34 29 chr17 68295813 68296493 -26976158 + L1_Mus2 LINE L1 5884 6566 0 4 1106 515 190 100 0 chr17 68296713 68296813 -26975838 + PB1D10 SINE Alu 2 111 -6 4 1106 239 297 11 21 chr17 68296813 68296906 -26975745 + GA-rich Low_complexity Low_complexity 1 92 0 4 1106 22 0 0 0 chr17 68298041 68298063 -26974588 + AT_rich Low_complexity Low_complexity 1 22 0 4 1106 28 48 0 0 chr17 68298493 68298535 -26974116 + AT_rich Low_complexity Low_complexity 1 42 0 4 1106 221 307 72 64 chr17 68300478 68300658 -26971993 + MIRb SINE MIR 29 218 -50 4 1106 230 214 36 0 chr17 68300686 68300742 -26971909 + tRNA-Ala-GCY_ tRNA tRNA 9 66 -9 4 1106 320 250 7 0 chr17 68300742 68300886 -26971765 + (CA)n Simple_repeat Simple_repeat 2 146 0 5 1106 706 180 23 0 chr17 68300900 68301161 -26971490 + (CA)n Simple_repeat Simple_repeat 1 267 0 5 1106 359 241 0 0 chr17 68301271 68301350 -26971301 + ID4 SINE ID 4 82 -1 5 1106 662 256 32 42 chr17 68304329 68304545 -26968106 + ID_B1 SINE B4 3 216 -8 5 1106 270 326 112 0 chr17 68304563 68304726 -26967925 + MIRb SINE MIR 40 228 -40 5 1106 316 320 80 53 chr17 68305119 68305456 -26967195 + L1MA4 LINE L1 74 419 -5981 5 1106 377 289 110 83 chr17 68305964 68306665 -26965986 + L1MA4 LINE L1 1108 1827 -4588 5 1106 21 0 0 0 chr17 68306993 68307014 -26965637 + AT_rich Low_complexity Low_complexity 1 21 0 5 1106 267 31 0 0 chr17 68307592 68307624 -26965027 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 1106 227 281 66 61 chr17 68308155 68308352 -26964299 + L1MA4 LINE L1 3426 3623 -2696 5 1106 419 254 133 35 chr17 68308779 68308922 -26963729 - RSINE1 SINE B4 0 165 9 5 1106 378 0 0 0 chr17 68309490 68309532 -26963119 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1106 198 0 0 0 chr17 68310323 68310345 -26962306 + (TTTTG)n Simple_repeat Simple_repeat 5 26 0 5 1106 807 275 35 0 chr17 68310630 68310865 -26961786 + L1MA4 LINE L1 5627 5878 -586 5 1106 992 40 1 0 chr17 68310909 68311049 -26961602 - B1_Mm SINE Alu 0 150 9 5 1106 471 244 139 6 chr17 68311050 68311223 -26961428 + L1MA4 LINE L1 5891 6086 -387 5 1106 303 210 111 0 chr17 68311224 68311305 -26961346 - B4A SINE B4 -88 204 115 5 1106 227 0 0 83 chr17 68312986 68313022 -26959629 + (TCTCCC)n Simple_repeat Simple_repeat 6 38 0 5 1106 2395 96 32 3 chr17 68313190 68313567 -26959084 - MTB LTR MaLR -8 392 5 5 1106 408 215 0 0 chr17 68313814 68313921 -26958730 + (CA)n Simple_repeat Simple_repeat 2 108 0 5 1106 653 263 98 0 chr17 68313947 68314141 -26958510 - ID_B1 SINE B4 -2 222 10 5 1106 617 187 73 0 chr17 68314183 68314306 -26958345 + B1_Mus2 SINE Alu 6 137 -10 5 1106 180 0 0 0 chr17 68314312 68314332 -26958319 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 1106 847 308 88 29 chr17 68314350 68314574 -26958077 - L1_Mur3 LINE L1 -69 5811 5574 5 1106 1280 99 50 0 chr17 68314574 68314756 -26957895 - B2_Mm2 SINE B2 0 195 5 5 1106 847 308 88 29 chr17 68314756 68314985 -26957666 - L1_Mur3 LINE L1 -307 5573 5331 5 1106 514 296 228 22 chr17 68314968 68315337 -26957314 - L1M2 LINE L1 -760 5087 4643 5 1106 243 0 0 0 chr17 68316415 68316442 -26956209 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1106 335 326 53 32 chr17 68316552 68316739 -26955912 - MLT1B LTR MaLR -33 357 167 5 1106 890 143 6 0 chr17 68316779 68316940 -26955711 + (TA)n Simple_repeat Simple_repeat 1 162 0 5 1106 183 309 11 56 chr17 68317255 68317344 -26955307 - L2 LINE L2 -543 2876 2792 5 1106 271 394 0 0 chr17 68317689 68317859 -26954792 + (CA)n Simple_repeat Simple_repeat 1 170 0 5 1106 501 141 0 0 chr17 68319010 68319095 -26953556 + (TA)n Simple_repeat Simple_repeat 1 85 0 5 1106 504 185 0 0 chr17 68319137 68319245 -26953406 + (TA)n Simple_repeat Simple_repeat 1 108 0 5 1106 462 224 0 0 chr17 68319287 68319403 -26953248 + (TA)n Simple_repeat Simple_repeat 1 116 0 5 1106 893 219 14 42 chr17 68319420 68319635 -26953016 + B3 SINE B2 6 214 -2 5 1106 247 330 213 5 chr17 68319951 68320158 -26952493 + B4A SINE B4 31 280 -12 5 1106 288 0 0 0 chr17 68320175 68320207 -26952444 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 1106 229 274 14 0 chr17 68320228 68320301 -26952350 + GA-rich Low_complexity Low_complexity 2 75 0 5 1106 317 253 25 12 chr17 68323167 68323247 -26949404 + PB1D10 SINE Alu 5 85 -32 5 1106 606 239 28 28 chr17 68323924 68324055 -26948596 + B1_Mur1 SINE Alu 5 136 -13 5 1106 260 27 0 26 chr17 68324055 68324093 -26948558 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 5 1106 1488 77 5 5 chr17 68326302 68326497 -26946154 - B2_Mm2 SINE B2 0 195 1 5 1106 474 132 0 0 chr17 68326713 68326789 -26945862 + (GAGAA)n Simple_repeat Simple_repeat 5 80 0 5 1106 330 248 50 50 chr17 68326791 68326910 -26945741 - Charlie12 DNA MER1_type -2754 119 1 5 1106 336 245 64 0 chr17 68326792 68326886 -26945765 + RMER30 DNA MER1_type 84 183 -19 5 1106 182 323 75 66 chr17 68328618 68328724 -26943927 - L2c LINE L2 -302 3085 2979 5 1106 522 0 0 0 chr17 68328940 68328998 -26943653 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 1106 591 301 13 0 chr17 68331158 68331311 -26941340 + RSINE1 SINE B4 8 162 -3 5 1106 565 232 0 17 chr17 68331314 68331494 -26941157 + (CATA)n Simple_repeat Simple_repeat 4 180 0 5 1106 464 259 6 0 chr17 68331471 68331633 -26941018 + (TA)n Simple_repeat Simple_repeat 1 163 0 5 1106 653 214 12 0 chr17 68331650 68331823 -26940828 + (CATATA)n Simple_repeat Simple_repeat 4 178 0 5 1106 240 200 0 0 chr17 68331834 68331889 -26940762 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1106 420 304 0 68 chr17 68332331 68332479 -26940172 - B1F SINE Alu -5 144 7 5 1106 1710 289 98 12 chr17 68332485 68333137 -26939514 + RCHARR1 DNA MER1_type 3 710 -264 5 1106 334 335 37 9 chr17 68333639 68333853 -26938798 + L1ME3 LINE L1 5858 6077 -85 5 1106 23 78 0 0 chr17 68334391 68334442 -26938209 + AT_rich Low_complexity Low_complexity 1 51 0 5 1106 204 125 0 0 chr17 68334522 68334554 -26938097 + (CAA)n Simple_repeat Simple_repeat 2 33 0 5 1106 264 100 0 0 chr17 68335347 68335387 -26937264 + (TTCA)n Simple_repeat Simple_repeat 3 42 0 5 1106 696 260 0 51 chr17 68336125 68336303 -26936348 - ID_B1 SINE B4 -51 173 5 5 1106 1142 61 0 33 chr17 68337888 68338040 -26934611 - B1_Mus1 SINE Alu -1 147 1 5 1106 393 75 0 0 chr17 68338130 68338183 -26934468 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1106 216 245 19 0 chr17 68339608 68339661 -26932990 - PB1 SINE Alu -8 119 66 5 1106 287 268 108 96 chr17 68339736 68339864 -26932787 + RCHARR1 DNA MER1_type 3 125 -849 5 1106 582 28 0 0 chr17 68339864 68339936 -26932715 + (CA)n Simple_repeat Simple_repeat 1 72 0 5 1106 287 268 108 96 chr17 68339936 68339964 -26932687 + RCHARR1 DNA MER1_type 126 160 -814 5 1106 502 270 172 0 chr17 68340009 68340213 -26932438 + RCHARR1 DNA MER1_type 267 505 -469 5 1106 3032 158 25 18 chr17 68340213 68340773 -26931878 + L1_Mur3 LINE L1 4660 5223 -657 5 1106 4275 215 38 24 chr17 68340750 68341662 -26930989 + Lx7 LINE L1 6506 7430 -266 5 1106 441 280 0 15 chr17 68341662 68341989 -26930662 + (TATATG)n Simple_repeat Simple_repeat 1 321 0 5 1106 302 246 159 53 chr17 68342077 68342322 -26930329 + Lx7 LINE L1 7422 7692 -4 5 1106 1103 222 129 16 chr17 68342340 68342780 -26929871 + RCHARR1 DNA MER1_type 483 972 -2 5 1106 438 53 0 0 chr17 68343860 68343917 -26928734 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1106 180 313 24 12 chr17 68344376 68344460 -26928191 + MIRb SINE MIR 168 252 -16 5 1106 216 0 0 0 chr17 68344733 68344757 -26927894 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 1106 476 202 46 0 chr17 68344761 68344870 -26927781 - B1_Mus2 SINE Alu -13 134 21 5 1106 274 254 28 0 chr17 68344937 68345008 -26927643 + PB1D10 SINE Alu 8 80 -37 5 1106 558 191 21 0 chr17 68345012 68345153 -26927498 + GA-rich Low_complexity Low_complexity 2 145 0 5 1106 1303 295 99 45 chr17 68346009 68347022 -26925629 - Lx7 LINE L1 -1670 5974 4873 5 1106 229 291 179 0 chr17 68347070 68347187 -26925464 + B1F1 SINE Alu 5 143 -6 5 1106 206 217 50 0 chr17 68347316 68347376 -26925275 + (TTTG)n Simple_repeat Simple_repeat 1 63 0 5 1106 683 237 7 13 chr17 68347392 68347546 -26925105 - RSINE1 SINE B4 -10 155 3 5 1106 269 114 0 74 chr17 68347550 68347645 -26925006 + (TTTG)n Simple_repeat Simple_repeat 1 88 0 5 1106 203 0 37 0 chr17 68348121 68348148 -26924503 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 5 1106 539 330 53 102 chr17 68348362 68349037 -26923614 + L1MC4a LINE L1 7161 7802 -80 5 1106 297 51 0 0 chr17 68349589 68349628 -26923023 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1106 264 30 0 0 chr17 68350450 68350483 -26922168 + (TCCA)n Simple_repeat Simple_repeat 1 33 0 5 1106 37 0 0 0 chr17 68353184 68353221 -26919430 + GC_rich Low_complexity Low_complexity 1 37 0 5 1106 372 43 0 0 chr17 68354260 68354306 -26918345 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1106 504 0 0 0 chr17 68354768 68354824 -26917827 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 1106 2385 163 7 5 chr17 68354875 68355295 -26917356 + MTC LTR MaLR 1 421 0 5 1106 290 26 0 25 chr17 68355307 68355347 -26917304 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 5 1106 225 0 0 0 chr17 68357021 68357046 -26915605 + (T)n Simple_repeat Simple_repeat 1 25 0 5 1106 2586 140 32 5 chr17 68357320 68357730 -26914921 + MTC LTR MaLR 1 421 0 5 1106 355 236 209 47 chr17 68358207 68358398 -26914253 - ID_B1 SINE B4 -1 223 2 5 1106 898 266 78 11 chr17 68358889 68359159 -26913492 + B4A SINE B4 1 288 -4 5 1106 210 71 0 0 chr17 68359192 68359220 -26913431 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 1106 742 188 50 0 chr17 68359310 68359470 -26913181 + B3 SINE B2 44 211 -5 5 1106 1083 109 53 37 chr17 68359490 68359680 -26912971 + B2_Mm2 SINE B2 2 194 -1 5 1106 2106 89 16 0 chr17 68360072 68360386 -26912265 + ORR1A2 LTR MaLR 1 319 -8 5 1106 684 36 0 0 chr17 68360855 68360938 -26911713 + (GAA)n Simple_repeat Simple_repeat 2 84 0 5 1106 267 209 73 15 chr17 68362930 68362998 -26909653 + PB1D10 SINE Alu 46 117 0 5 1106 23 0 0 0 chr17 68363311 68363334 -26909317 + AT_rich Low_complexity Low_complexity 1 23 0 5 1106 222 277 101 65 chr17 68363687 68363826 -26908825 + MIR SINE MIR 28 173 -95 5 1106 871 233 173 30 chr17 68363921 68364222 -26908429 + MTE2b LTR MaLR 36 379 0 5 1106 833 261 65 38 chr17 68364581 68364844 -26907807 + B4A SINE B4 7 276 -16 5 1106 405 120 24 12 chr17 68364893 68364977 -26907674 + CT-rich Low_complexity Low_complexity 3 87 0 5 1106 493 288 15 15 chr17 68365708 68365842 -26906809 + MER63D DNA AcHobo 1 134 -927 5 1106 691 229 104 0 chr17 68365850 68366033 -26906618 + ORR1D1 LTR MaLR 1 202 -172 5 1106 616 178 139 6 chr17 68366739 68366897 -26905754 + ORR1D1 LTR MaLR 192 370 0 5 1106 620 297 68 73 chr17 68366897 68367301 -26905350 + MER63D DNA AcHobo 166 567 -494 5 1106 1679 221 83 17 chr17 68367315 68367695 -26904956 + RLTR20D LTR ERVK 69 465 -103 5 1106 267 54 0 0 chr17 68367695 68367732 -26904919 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1106 1679 221 83 17 chr17 68367732 68367820 -26904831 + RLTR20D LTR ERVK 466 567 -1 5 1106 830 284 15 53 chr17 68368122 68368386 -26904265 - B4A SINE B4 -18 274 21 5 1106 309 125 0 0 chr17 68369571 68369627 -26903024 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 1106 239 256 10 72 chr17 68369628 68369725 -26902926 - RSINE1 SINE B4 0 165 75 6 1106 380 299 71 30 chr17 68369744 68369913 -26902738 - B4 SINE B4 -64 228 53 6 1106 346 195 34 11 chr17 68370006 68370094 -26902557 - MER57E1 LTR ERV1 -282 90 1 6 1106 189 94 0 0 chr17 68370635 68370667 -26901984 + (A)n Simple_repeat Simple_repeat 1 32 0 6 1106 201 267 0 32 chr17 68371133 68371195 -26901456 + GA-rich Low_complexity Low_complexity 3 62 0 6 1106 3433 43 2 0 chr17 68371473 68371872 -26900779 + MTB LTR MaLR 1 400 0 6 1106 231 268 18 0 chr17 68372646 68372702 -26899949 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 1106 444 118 0 0 chr17 68372986 68373054 -26899597 + (TA)n Simple_repeat Simple_repeat 1 68 0 6 1106 22 0 0 0 chr17 68373088 68373110 -26899541 + AT_rich Low_complexity Low_complexity 1 22 0 6 1106 288 0 0 0 chr17 68373158 68373190 -26899461 + (TCTA)n Simple_repeat Simple_repeat 3 34 0 6 1106 308 193 0 0 chr17 68373232 68373289 -26899362 - B1_Mur1 SINE Alu -26 123 67 6 1106 266 217 33 0 chr17 68373287 68373347 -26899304 - B1F SINE Alu -21 128 67 6 1106 506 264 3 1 chr17 68373344 68373464 -26899187 - B1_Mur1 SINE Alu -22 127 7 6 1106 290 294 48 10 chr17 68373485 68373588 -26899063 + PB1D10 SINE Alu 1 107 -10 6 1106 473 283 94 6 chr17 68373628 68373809 -26898842 - L1MA4 LINE L1 -410 5890 5694 6 1106 380 171 0 12 chr17 68374514 68374597 -26898054 + C-rich Low_complexity Low_complexity 4 85 0 6 1106 228 62 0 0 chr17 68374820 68374842 -26897809 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1106 1230 41 0 0 chr17 68374842 68374989 -26897662 - B1_Mm SINE Alu 0 147 1 6 1106 228 62 0 0 chr17 68374989 68374998 -26897653 + (T)n Simple_repeat Simple_repeat 1 9 0 6 1106 27 0 0 0 chr17 68374998 68375025 -26897626 + AT_rich Low_complexity Low_complexity 1 27 0 6 1106 257 222 0 73 chr17 68375128 68375196 -26897455 - Tigger7 DNA MER2_type -88 2403 2341 6 1106 440 316 128 16 chr17 68375227 68375484 -26897167 - Tigger7 DNA MER2_type -2201 290 5 6 1106 273 371 54 0 chr17 68375660 68375865 -26896786 - MLT1C LTR MaLR -232 235 20 6 1106 25 31 0 0 chr17 68376023 68376055 -26896596 + AT_rich Low_complexity Low_complexity 1 32 0 6 1106 311 283 38 30 chr17 68376688 68376819 -26895832 - MIRc SINE MIR -32 236 105 6 1106 1511 279 79 26 chr17 68377028 68377074 -26895577 - L1MC1 LINE L1 -24 6309 6261 6 1106 1501 227 41 25 chr17 68377074 68377436 -26895215 + ORR1D2 LTR MaLR 1 368 -2 6 1106 1511 279 79 26 chr17 68377436 68377933 -26894718 - L1MC1 LINE L1 -73 6260 5737 6 1106 378 261 11 0 chr17 68378038 68378130 -26894521 - L1MC1 LINE L1 -803 5530 5438 6 1106 846 262 74 20 chr17 68378164 68378460 -26894191 - L1MC1 LINE L1 -926 5220 4909 6 1106 2256 76 0 0 chr17 68379125 68379441 -26893210 - ORR1A2 LTR MaLR -9 318 3 6 1106 434 334 88 39 chr17 68379746 68380188 -26892463 - L1MA7 LINE L1 -164 6127 5664 6 1106 262 226 16 16 chr17 68380250 68380313 -26892338 + ID4_ SINE ID 2 64 -19 6 1106 288 210 16 0 chr17 68380642 68380704 -26891947 + B2_Mm2 SINE B2 11 73 -122 6 1106 1544 137 138 32 chr17 68380933 68381303 -26891348 + RLTR9F LTR ERVK 1 409 -6 6 1106 595 224 39 67 chr17 68383420 68383674 -26888977 + Lx7 LINE L1 5864 6110 -1586 6 1106 5739 221 83 28 chr17 68383763 68385176 -26887475 + Lx7 LINE L1 6026 7517 -179 6 1106 448 0 55 14 chr17 68385181 68385254 -26887397 + (GA)n Simple_repeat Simple_repeat 1 76 0 6 1106 340 168 178 0 chr17 68385254 68385355 -26887296 + Lx7 LINE L1 7578 7696 0 6 1106 22 0 0 0 chr17 68385355 68385377 -26887274 + AT_rich Low_complexity Low_complexity 1 22 0 6 1106 586 175 189 8 chr17 68385605 68385732 -26886919 + B1_Mur4 SINE Alu 1 150 0 6 1106 792 32 0 0 chr17 68385755 68385850 -26886801 + (TC)n Simple_repeat Simple_repeat 2 96 0 6 1106 305 198 11 0 chr17 68385850 68385941 -26886710 + (TG)n Simple_repeat Simple_repeat 2 93 0 6 1106 280 255 304 6 chr17 68385944 68386102 -26886549 - B3 SINE B2 -11 205 1 6 1106 246 250 32 54 chr17 68386963 68387056 -26885595 - ORR1E LTR MaLR 0 359 269 6 1106 342 0 0 0 chr17 68387605 68387643 -26885008 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1106 213 245 0 0 chr17 68387949 68387998 -26884653 + B1F SINE Alu 99 147 -2 6 1106 216 0 0 0 chr17 68389722 68389746 -26882905 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1106 447 130 0 0 chr17 68390033 68390110 -26882541 + (CA)n Simple_repeat Simple_repeat 1 77 0 6 1106 258 311 32 51 chr17 68390122 68390278 -26882373 + L1ME4a LINE L1 5971 6123 -1 6 1106 516 72 0 0 chr17 68390326 68390395 -26882256 + (GAAA)n Simple_repeat Simple_repeat 3 71 0 6 1106 315 49 0 0 chr17 68390721 68390762 -26881889 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1106 311 157 14 0 chr17 68390763 68390833 -26881818 + GA-rich Low_complexity Low_complexity 2 72 0 6 1106 1151 143 44 10 chr17 68391608 68391813 -26880838 + RMER19B LTR ERVK 691 902 0 6 1106 1933 150 84 24 chr17 68392235 68392617 -26880034 + MTB_Mm LTR MaLR 3 407 0 6 1106 306 0 0 0 chr17 68393005 68393039 -26879612 + (TTG)n Simple_repeat Simple_repeat 3 36 0 6 1106 282 260 46 83 chr17 68393604 68393713 -26878938 - B1F SINE Alu -7 142 38 6 1106 586 280 31 90 chr17 68394162 68394417 -26878234 - B4A SINE B4 -37 255 16 6 1106 242 27 81 0 chr17 68395657 68395694 -26876957 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 6 1106 336 283 73 45 chr17 68396077 68396368 -26876283 + RSINE1 SINE B4 6 281 -11 6 1106 381 169 0 0 chr17 68396443 68396526 -26876125 + GA-rich Low_complexity Low_complexity 2 84 0 6 1106 357 109 0 0 chr17 68396725 68396780 -26875871 + (TA)n Simple_repeat Simple_repeat 2 56 0 6 1106 267 191 0 0 chr17 68396825 68396888 -26875763 + GA-rich Low_complexity Low_complexity 3 65 0 6 1106 204 154 0 0 chr17 68396888 68396940 -26875711 + (CATATA)n Simple_repeat Simple_repeat 2 53 0 6 1106 675 142 0 0 chr17 68398554 68398674 -26873977 + (TGAA)n Simple_repeat Simple_repeat 2 121 0 6 1106 444 314 98 47 chr17 68399646 68399923 -26872728 - B4 SINE B4 0 292 2 6 1106 4602 161 295 10 chr17 68399923 68401568 -26871083 - L1_Mur2 LINE L1 -2214 3666 1408 6 1106 3722 153 22 3 chr17 68401624 68402252 -26870399 + L1_Mur3 LINE L1 3639 4278 -1602 6 1106 1187 75 0 0 chr17 68402258 68402405 -26870246 + B1_Mus2 SINE Alu 1 147 0 6 1106 1670 144 0 0 chr17 68402418 68402675 -26869976 + Lx3A LINE L1 6723 6979 -2 6 1106 237 132 0 0 chr17 68402676 68402714 -26869937 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 6 1106 1898 159 23 6 chr17 68402896 68403238 -26869413 + L1_Mur3 LINE L1 4282 4629 -1251 6 1106 1071 160 11 0 chr17 68403239 68403420 -26869231 + L1_Mur3 LINE L1 5345 5527 -353 6 1106 2201 257 147 39 chr17 68403423 68404101 -26868550 + Lx7 LINE L1 6713 7482 -214 6 1106 840 101 0 0 chr17 68404101 68404230 -26868421 + (TTCC)n Simple_repeat Simple_repeat 3 131 0 6 1106 2201 257 147 39 chr17 68404230 68404418 -26868233 + Lx7 LINE L1 7483 7672 -24 6 1106 2213 77 19 0 chr17 68404797 68405110 -26867541 - ORR1A2 LTR MaLR -8 319 1 6 1106 236 235 125 19 chr17 68405126 68405230 -26867421 + L1MC1 LINE L1 5785 5899 -445 6 1106 528 273 34 29 chr17 68405429 68405633 -26867018 + L1MC1 LINE L1 6056 6260 -73 6 1106 1180 261 62 18 chr17 68405724 68406172 -26866479 + L1MA5A LINE L1 5556 6023 -274 6 1106 422 244 0 6 chr17 68406174 68406347 -26866304 + GA-rich Low_complexity Low_complexity 5 176 0 6 1106 347 186 207 0 chr17 68406349 68406445 -26866206 + B1_Mur2 SINE Alu 42 144 -5 6 1106 1286 190 66 7 chr17 68406946 68407232 -26865419 - MTD LTR MaLR -105 314 12 6 1106 2394 165 93 29 chr17 68407481 68408029 -26864622 - RLTR31A_Mm LTR ERVK -1 583 1 6 1106 354 250 13 0 chr17 68408128 68408204 -26864447 + ID4 SINE ID 4 80 -3 6 1106 537 167 0 0 chr17 68408296 68408398 -26864253 + (CA)n Simple_repeat Simple_repeat 1 102 0 6 1106 460 278 16 0 chr17 68408541 68408667 -26863984 - B1F SINE Alu 0 149 22 6 1106 248 331 59 7 chr17 68409116 68409268 -26863383 + Charlie8 DNA MER1_type 66 225 -2203 6 1106 248 77 0 25 chr17 68409579 68409619 -26863032 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 1106 261 287 63 11 chr17 68411568 68411663 -26860988 + RMER15 LTR ERVL 476 575 0 6 1106 1154 75 0 0 chr17 68412298 68412444 -26860207 + B1_Mus2 SINE Alu 1 146 -1 6 1106 183 100 0 0 chr17 68412444 68412474 -26860177 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 6 1106 360 318 72 85 chr17 68413636 68413887 -26858764 - B4A SINE B4 -25 267 1 6 1106 2025 150 30 69 chr17 68415626 68416019 -26856632 + ORR1C1 LTR MaLR 1 378 0 6 1106 4094 192 42 119 chr17 68416567 68416971 -26855680 + RMER1B Other Other 44 451 -615 6 1106 426 20 0 0 chr17 68416971 68417022 -26855629 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 1106 4094 192 42 119 chr17 68417022 68417722 -26854929 + RMER1B Other Other 452 1063 -3 6 1106 27 0 0 0 chr17 68417805 68417832 -26854819 + AT_rich Low_complexity Low_complexity 1 27 0 6 1106 246 46 60 30 chr17 68417832 68417899 -26854752 + (TTA)n Simple_repeat Simple_repeat 2 70 0 6 1106 721 295 74 30 chr17 68417923 68418220 -26854431 - MER44B DNA MER2_type -231 319 10 6 138 196 367 64 39 chr17 68419463 68419619 -26853032 + MIRb SINE MIR 43 202 -66 6 1107 252 0 0 0 chr17 68420064 68420092 -26852559 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 1107 3440 25 5 0 chr17 68422053 68422447 -26850204 + MTA_Mm LTR MaLR 1 396 0 6 1107 249 194 44 15 chr17 68422511 68422579 -26850072 + CT-rich Low_complexity Low_complexity 5 74 0 6 1107 228 246 35 52 chr17 68422669 68422785 -26849866 + (CATATA)n Simple_repeat Simple_repeat 1 114 0 6 1107 231 189 37 28 chr17 68422846 68422955 -26849696 + (CATA)n Simple_repeat Simple_repeat 4 113 0 6 1107 1231 48 7 0 chr17 68422988 68423134 -26849517 - B1_Mm SINE Alu 0 147 1 6 1107 710 163 16 0 chr17 68423500 68423623 -26849028 + B1_Mur2 SINE Alu 15 139 -10 6 1107 356 40 0 20 chr17 68423623 68423674 -26848977 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 6 1107 673 316 92 6 chr17 68423769 68424107 -26848544 + MTEa LTR MaLR 1 367 -12 6 1107 374 309 86 16 chr17 68424407 68424535 -26848116 + MLT1B LTR MaLR 246 382 -8 7 1107 257 35 50 50 chr17 68424830 68424890 -26847761 + (CAAAA)n Simple_repeat Simple_repeat 3 62 0 7 1107 267 238 32 0 chr17 68425748 68425811 -26846840 + ID4 SINE ID 17 81 -2 7 1107 1142 75 0 7 chr17 68425895 68426043 -26846608 - B1_Mus2 SINE Alu 0 147 1 7 1107 520 188 10 0 chr17 68426043 68426143 -26846508 - PB1D10 SINE Alu -11 106 5 7 1107 261 196 36 0 chr17 68426254 68426310 -26846341 - Lx7 LINE L1 0 7696 7639 7 1107 659 245 36 26 chr17 68426405 68426460 -26846191 - B3A SINE B2 0 198 147 7 1107 468 0 0 0 chr17 68426460 68426512 -26846139 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 1107 659 245 36 26 chr17 68426512 68426649 -26846002 - B3A SINE B2 -52 146 4 7 1107 887 222 56 0 chr17 68427252 68427450 -26845201 + B3 SINE B2 1 209 -7 7 1107 357 24 0 0 chr17 68429293 68429335 -26843316 + (TCTG)n Simple_repeat Simple_repeat 3 44 0 7 1107 972 88 29 6 chr17 68429356 68429528 -26843123 + (TCTA)n Simple_repeat Simple_repeat 3 178 0 7 1107 1860 145 33 33 chr17 68429605 68429934 -26842717 - ORR1A4 LTR MaLR 0 329 1 7 1107 309 271 27 12 chr17 68430205 68430310 -26842341 - ORR1E LTR MaLR 0 374 266 7 1107 306 362 69 6 chr17 68430779 68430954 -26841697 - L2a LINE L2 -27 3399 3214 7 1107 2230 220 35 48 chr17 68431002 68431105 -26841546 - RLTR20B2 LTR ERVK 0 560 461 7 1107 618 14 0 0 chr17 68431105 68431176 -26841475 + (CA)n Simple_repeat Simple_repeat 2 72 0 7 1107 2230 220 35 48 chr17 68431176 68431639 -26841012 - RLTR20B2 LTR ERVK -100 460 1 7 1107 2403 85 79 3 chr17 68432006 68432348 -26840303 - RLTR9A LTR ERVK 0 368 1 7 1107 257 0 30 0 chr17 68432544 68432577 -26840074 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 7 1107 8673 143 31 13 chr17 68432577 68434346 -26838305 - Lx4A LINE L1 -1 7057 5236 7 1107 324 0 0 0 chr17 68434346 68434382 -26838269 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 7 1107 6888 134 6 16 chr17 68434382 68434840 -26837811 - Lx4A LINE L1 -642 5235 4785 7 1107 335 245 70 35 chr17 68437221 68437335 -26835316 + PB1D7 SINE Alu 2 119 -1 7 1107 212 0 36 0 chr17 68437723 68437751 -26834900 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 7 1107 23814 112 20 5 chr17 68440085 68446191 -26826460 + L1_Mus3 LINE L1 395 6636 -2 7 1107 221 238 0 0 chr17 68446204 68446246 -26826405 + polypurine Low_complexity Low_complexity 5 46 0 7 1107 1254 61 0 22 chr17 68446248 68446432 -26826219 + (GAA)n Simple_repeat Simple_repeat 1 180 0 7 1107 223 341 0 33 chr17 68448384 68448475 -26824176 + (TG)n Simple_repeat Simple_repeat 1 88 0 7 1107 390 294 6 38 chr17 68448467 68448690 -26823961 + (TG)n Simple_repeat Simple_repeat 1 215 0 7 1107 367 264 14 29 chr17 68448690 68448975 -26823676 + (TATG)n Simple_repeat Simple_repeat 1 280 0 7 1107 335 307 106 24 chr17 68450124 68450294 -26822357 + LTR16C LTR ERVL 304 487 -2 7 1107 746 247 70 86 chr17 68450330 68450689 -26821962 - ORR1E LTR MaLR -4 355 3 7 1107 415 91 45 0 chr17 68450813 68450879 -26821772 - MT2B LTR ERVL -1 583 515 7 1107 37 0 0 0 chr17 68450879 68450916 -26821735 + AT_rich Low_complexity Low_complexity 1 37 0 7 1107 3048 119 71 31 chr17 68450921 68451483 -26821168 - MT2B LTR ERVL -47 554 1 7 1107 1857 92 105 9 chr17 68452118 68452449 -26820202 - ORR1A3 LTR MaLR 0 394 3 7 1107 1200 283 120 14 chr17 68452597 68453038 -26819613 - Lx8 LINE L1 -4 7469 6982 7 1107 746 106 8 0 chr17 68453130 68453253 -26819398 + (TG)n Simple_repeat Simple_repeat 2 125 0 7 1107 760 161 13 13 chr17 68454641 68454780 -26817871 + GA-rich Low_complexity Low_complexity 1 141 0 7 1107 1557 19 0 0 chr17 68454780 68455140 -26817511 + (GAA)n Simple_repeat Simple_repeat 1 360 0 7 1107 760 161 13 13 chr17 68455140 68455156 -26817495 + polypurine Low_complexity Low_complexity 142 156 0 7 1107 198 0 0 0 chr17 68455326 68455348 -26817303 + (TG)n Simple_repeat Simple_repeat 2 23 0 7 1107 743 329 59 39 chr17 68455506 68455769 -26816882 - MER57F LTR ERV1 -39 397 123 7 1107 679 289 67 59 chr17 68455769 68456144 -26816507 - MTEb LTR MaLR 0 379 2 7 1107 743 329 59 39 chr17 68456144 68456237 -26816414 - MER57F LTR ERV1 -314 122 34 7 1107 417 309 136 77 chr17 68456332 68456762 -26815889 + MLT2B4 LTR ERVL 15 515 0 7 1107 306 0 0 0 chr17 68457499 68457533 -26815118 + (TC)n Simple_repeat Simple_repeat 1 34 0 7 1107 450 0 0 0 chr17 68457533 68457582 -26815069 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 1107 4374 86 25 2 chr17 68458579 68459175 -26813476 + L1_Mus3 LINE L1 6029 6638 0 7 1107 459 174 0 0 chr17 68459205 68459291 -26813360 + GA-rich Low_complexity Low_complexity 3 88 0 7 1107 202 55 0 53 chr17 68459513 68459551 -26813100 + (TAA)n Simple_repeat Simple_repeat 2 37 0 7 1107 328 336 26 0 chr17 68460416 68460529 -26812122 + ORR1E LTR MaLR 22 137 -222 7 1107 240 200 0 0 chr17 68461785 68461845 -26810806 + (TTCA)n Simple_repeat Simple_repeat 1 60 0 7 1107 1512 171 30 58 chr17 68462678 68463124 -26809527 - RLTR11A2 LTR ERVK 0 527 82 7 1107 252 291 39 135 chr17 68464138 68464345 -26808306 + RMER10A LTR ERVL 18 204 -238 7 1107 378 0 0 0 chr17 68464345 68464387 -26808264 + (TC)n Simple_repeat Simple_repeat 2 43 0 7 1107 301 191 99 22 chr17 68464564 68464655 -26807996 + RMER10A LTR ERVL 318 415 -27 7 1107 272 309 189 6 chr17 68465432 68465601 -26807050 - B4A SINE B4 -91 201 2 7 1107 1806 113 23 176 chr17 68466393 68466877 -26805774 + RMER17C LTR ERVK 1 410 0 7 1107 982 271 77 10 chr17 68467284 68467597 -26805054 - MTD LTR MaLR -12 407 74 7 1107 362 209 133 0 chr17 68467685 68467790 -26804861 - MTE2b LTR MaLR -13 366 248 7 1107 186 103 0 0 chr17 68467796 68467825 -26804826 + (T)n Simple_repeat Simple_repeat 1 29 0 7 1107 1180 29 0 0 chr17 68467834 68467971 -26804680 - B1_Mus2 SINE Alu -9 138 2 7 1107 363 23 0 0 chr17 68468486 68468530 -26804121 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1107 397 319 111 77 chr17 68469241 68469594 -26803057 + MLT1A0 LTR MaLR 1 365 0 7 1107 477 216 0 0 chr17 68470541 68470675 -26801976 + (CA)n Simple_repeat Simple_repeat 2 135 0 7 1107 325 48 0 0 chr17 68470675 68470717 -26801934 + HAL1-3A_ME LINE L1 1977 2018 -840 7 1107 1388 71 39 0 chr17 68471467 68471649 -26801002 + B2_Mm2 SINE B2 2 190 -5 7 1107 184 362 0 21 chr17 68472351 68472447 -26800204 + MIR SINE MIR 105 198 -64 7 1107 363 0 20 0 chr17 68473181 68473231 -26799420 + B1_Mus2 SINE Alu 97 147 0 7 1107 351 337 43 96 chr17 68473316 68473716 -26798935 - ORR1E LTR MaLR 0 379 1 7 1107 22 0 0 0 chr17 68473909 68473931 -26798720 + AT_rich Low_complexity Low_complexity 1 22 0 7 1107 2741 104 34 47 chr17 68473990 68474434 -26798217 - BGLII_B LTR ERVK -2 439 2 7 1107 783 280 10 20 chr17 68474915 68475112 -26797539 + B3A SINE B2 1 195 -3 7 1107 429 277 95 0 chr17 68475661 68475798 -26796853 + MER2 DNA MER2_type 119 268 -77 7 1107 22 0 0 0 chr17 68477155 68477177 -26795474 + AT_rich Low_complexity Low_complexity 1 22 0 7 1107 1494 222 74 76 chr17 68477189 68477690 -26794961 - RLTR20B3 LTR ERVK -56 521 22 7 1107 356 88 18 0 chr17 68477951 68478008 -26794643 + (GA)n Simple_repeat Simple_repeat 1 58 0 7 1107 508 252 22 11 chr17 68478450 68478599 -26794052 - RLTR11B LTR ERVK -37 491 284 7 1107 1128 74 14 0 chr17 68478599 68478611 -26794040 - B1_Mur4 SINE Alu 0 150 139 7 1107 355 19 39 0 chr17 68478611 68478663 -26793988 + (TTG)n Simple_repeat Simple_repeat 1 54 0 7 1107 1128 74 14 0 chr17 68478663 68478798 -26793853 - B1_Mur4 SINE Alu -12 138 2 7 1107 372 255 43 134 chr17 68478798 68478852 -26793799 - RLTR11B LTR ERVK -189 339 307 7 1107 369 0 0 0 chr17 68478852 68478893 -26793758 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1107 411 21 0 0 chr17 68478893 68478940 -26793711 + (GA)n Simple_repeat Simple_repeat 1 48 0 7 1107 948 207 8 78 chr17 68478940 68479243 -26793408 - RLTR11B LTR ERVK -222 306 12 7 1107 203 0 37 0 chr17 68479507 68479534 -26793117 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 7 1107 195 42 0 0 chr17 68480759 68480783 -26791868 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 7 1107 687 225 24 73 chr17 68481749 68481955 -26790696 - B3A SINE B2 0 198 3 7 1107 700 272 6 12 chr17 68483309 68483480 -26789171 + B3 SINE B2 1 170 -46 7 1107 225 0 0 0 chr17 68483507 68483532 -26789119 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 1107 450 36 0 0 chr17 68484637 68484693 -26787958 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 1107 281 336 83 15 chr17 68485217 68485482 -26787169 - LTR48 LTR ERV1 -42 745 269 7 1107 312 27 0 0 chr17 68486456 68486493 -26786158 + (CCTG)n Simple_repeat Simple_repeat 2 38 0 7 1107 252 0 0 0 chr17 68486493 68486520 -26786131 + (TATG)n Simple_repeat Simple_repeat 1 28 0 7 1107 975 70 29 6 chr17 68486520 68486692 -26785959 + (TCTA)n Simple_repeat Simple_repeat 3 178 0 7 1107 256 309 0 23 chr17 68487072 68487158 -26785493 + MER44A DNA MER2_type 1 84 -255 7 1107 823 280 9 23 chr17 68487388 68487607 -26785044 + B3 SINE B2 1 216 0 7 1107 513 0 0 0 chr17 68490513 68490570 -26782081 + (TTCTC)n Simple_repeat Simple_repeat 4 60 0 7 1107 186 133 0 0 chr17 68490572 68490602 -26782049 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 7 1107 1181 261 83 0 chr17 68491360 68491709 -26780942 - Lx9 LINE L1 -6 7638 7261 7 1107 411 119 0 0 chr17 68491771 68491838 -26780813 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 7 1107 294 301 105 9 chr17 68491839 68491953 -26780698 - PB1 SINE Alu -2 125 1 7 1107 1988 52 12 0 chr17 68492071 68492320 -26780331 - L1_Mus1 LINE L1 0 6567 6316 7 1107 396 0 0 0 chr17 68492353 68492397 -26780254 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1107 531 112 0 0 chr17 68492947 68493027 -26779624 + (TG)n Simple_repeat Simple_repeat 2 81 0 7 1107 279 0 0 0 chr17 68493099 68493130 -26779521 + (TCTG)n Simple_repeat Simple_repeat 1 31 0 7 1107 22 0 0 0 chr17 68493292 68493314 -26779337 + AT_rich Low_complexity Low_complexity 1 22 0 7 1107 773 326 80 35 chr17 68493781 68493908 -26778743 - Tigger7 DNA MER2_type -2018 473 342 7 1107 1030 262 58 61 chr17 68493908 68494286 -26778365 - MTEb LTR MaLR 0 379 3 8 1107 773 326 80 35 chr17 68494286 68494559 -26778092 - Tigger7 DNA MER2_type -2150 341 55 7 1107 3074 62 45 0 chr17 68494669 68495072 -26777579 + BGLII LTR ERVK 1 421 0 8 1107 198 91 0 0 chr17 68495734 68495767 -26776884 + (CA)n Simple_repeat Simple_repeat 1 33 0 8 1107 2721 143 5 12 chr17 68496679 68497103 -26775548 + MTC LTR MaLR 1 421 0 8 1107 180 0 0 0 chr17 68498523 68498543 -26774108 + (T)n Simple_repeat Simple_repeat 1 20 0 8 1107 218 222 19 0 chr17 68498577 68498631 -26774020 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 8 1107 228 321 36 24 chr17 68499071 68499154 -26773497 - LTR40a LTR ERVL -60 459 376 8 1107 384 214 75 25 chr17 68499879 68499999 -26772652 + ORR1D-int LTR MaLR 865 990 -380 8 1107 720 81 2 0 chr17 68500038 68500153 -26772498 - B1_Mus2 SINE Alu -31 118 2 1 1107 529 130 122 0 chr17 68500162 68500277 -26772374 + ORR1D2-int LTR MaLR 1218 1346 -24 2 1107 283 229 28 14 chr17 68500284 68500355 -26772296 + ORR1D2 LTR MaLR 41 112 -258 2 1107 7870 70 10 1 chr17 68500355 68501872 -26770779 + L1_Mus1 LINE L1 5056 6567 0 3 1107 759 269 95 4 chr17 68501872 68502115 -26770536 + ORR1D2 LTR MaLR 89 353 -17 2 1107 648 38 0 0 chr17 68502522 68502601 -26770050 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 4 1107 837 89 57 36 chr17 68502737 68502877 -26769774 - B2_Mm2 SINE B2 -52 143 1 5 1107 200 167 0 20 chr17 68502949 68502998 -26769653 + (CAGA)n Simple_repeat Simple_repeat 3 50 0 6 1107 942 253 111 35 chr17 68503374 68503751 -26768900 + MTD LTR MaLR 4 409 -10 7 1107 571 280 50 32 chr17 68503846 68504067 -26768584 - L1MD2 LINE L1 0 6359 6135 8 1107 651 219 0 17 chr17 68504067 68504248 -26768403 + (TG)n Simple_repeat Simple_repeat 2 179 0 9 1107 532 313 72 0 chr17 68505399 68505594 -26767057 - Tigger7 DNA MER2_type -48 2443 2236 1 1107 1610 130 11 11 chr17 68505675 68505939 -26766712 - RMER19C LTR ERVK -2 609 346 1 1107 1712 238 42 56 chr17 68505939 68506510 -26766141 + RLTR20B1 LTR ERVK 1 563 0 1 1107 1490 139 78 161 chr17 68506510 68506892 -26765759 - RMER19C LTR ERVK -260 351 2 1 1107 480 298 197 25 chr17 68506892 68507209 -26765442 - Tigger7 DNA MER2_type -2119 372 1 1 1107 405 271 0 0 chr17 68508502 68508668 -26763983 + (CA)n Simple_repeat Simple_repeat 2 167 0 1 1107 335 123 53 0 chr17 68508668 68508725 -26763926 + HAL1-3A_ME LINE L1 1976 2035 -823 1 1107 259 288 9 46 chr17 68510017 68510126 -26762525 + MLT1A1 LTR MaLR 304 408 0 1 1107 787 112 239 12 chr17 68510263 68510426 -26762225 + RMER1C Other Other 1143 1342 0 1 1107 216 0 0 0 chr17 68510558 68510582 -26762069 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 1107 401 95 0 31 chr17 68510618 68510683 -26761968 + ORR1C2 LTR MaLR 1 63 -321 1 1107 801 170 7 0 chr17 68510687 68510828 -26761823 + ORR1C2 LTR MaLR 243 384 0 1 1107 878 122 23 7 chr17 68511315 68511622 -26761029 + (CA)n Simple_repeat Simple_repeat 1 312 0 1 1107 2978 57 48 18 chr17 68516794 68517187 -26755464 - MTB_Mm LTR MaLR -2 405 1 2 1107 286 275 140 21 chr17 68517488 68517581 -26755070 - PB1D10 SINE Alu -2 115 12 2 1107 312 27 0 0 chr17 68517675 68517712 -26754939 + (TC)n Simple_repeat Simple_repeat 1 37 0 2 1107 270 56 0 0 chr17 68517712 68517747 -26754904 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1107 184 320 38 45 chr17 68517854 68518011 -26754640 + L2 LINE L2 2728 2883 -536 2 1107 413 240 96 70 chr17 68518199 68518356 -26754295 - RSINE1 SINE B4 -2 163 3 2 1107 256 114 0 0 chr17 68518407 68518442 -26754209 + PB1D10 SINE Alu 72 106 -11 2 1107 1746 157 151 0 chr17 68519094 68519413 -26753238 - ORR1B2 LTR MaLR 0 367 1 2 1107 595 300 0 18 chr17 68519621 68519784 -26752867 - B3A SINE B2 -37 161 2 2 1107 300 340 31 25 chr17 68520925 68521085 -26751566 - B4A SINE B4 0 292 132 2 1107 1691 174 3 22 chr17 68521199 68521517 -26751134 - Lx LINE L1 0 6654 6343 3 1107 281 258 45 0 chr17 68521517 68521606 -26751045 - MER53 DNA hAT -100 93 1 3 1107 230 73 0 24 chr17 68524344 68524386 -26748265 + (TTTTTG)n Simple_repeat Simple_repeat 4 44 0 3 1107 1074 57 0 0 chr17 68524387 68524528 -26748123 - B1_Mus1 SINE Alu -1 147 7 3 1107 600 74 31 10 chr17 68524527 68524623 -26748028 + B2_Mm2 SINE B2 94 191 -4 3 1107 288 0 0 0 chr17 68524883 68524915 -26747736 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 3 1107 688 260 16 22 chr17 68524918 68525103 -26747548 - B3 SINE B2 -28 188 5 3 1107 424 287 21 86 chr17 68525619 68525838 -26746813 - B3A SINE B2 -13 203 3 3 1107 351 0 0 0 chr17 68526393 68526432 -26746219 + (A)n Simple_repeat Simple_repeat 1 39 0 3 1107 282 232 61 99 chr17 68526520 68526756 -26745895 + L1MB2 LINE L1 1513 1574 -5276 3 1107 330 26 0 0 chr17 68526804 68526843 -26745808 + (TAA)n Simple_repeat Simple_repeat 2 40 0 4 1107 241 216 0 51 chr17 68527022 68527100 -26745551 + L1MB2 LINE L1 1755 1828 -5022 3 1107 433 321 76 5 chr17 68527335 68527532 -26745119 + L1MB2 LINE L1 2395 2605 -4244 3 1107 294 228 0 17 chr17 68527533 68527591 -26745060 + G-rich Low_complexity Low_complexity 5 61 0 4 1107 816 159 17 0 chr17 68527592 68527768 -26744883 + GA-rich Low_complexity Low_complexity 2 180 0 4 1107 779 227 406 11 chr17 68527782 68528077 -26744574 + MTD LTR MaLR 10 419 0 4 1107 252 0 0 0 chr17 68528607 68528635 -26744016 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1107 627 232 160 0 chr17 68528699 68528880 -26743771 - B3 SINE B2 -6 210 1 4 1107 251 292 14 0 chr17 68528895 68528967 -26743684 + L1MB2 LINE L1 2852 2924 -3918 3 1107 816 267 56 16 chr17 68528984 68529334 -26743317 - MTD LTR MaLR -12 407 10 4 1107 1349 293 180 28 chr17 68529361 68530658 -26741993 + L1MB2 LINE L1 2937 4430 -2412 3 1107 239 228 0 34 chr17 68530712 68530771 -26741880 + L1MB2 LINE L1 6128 6184 -692 3 1107 535 292 45 19 chr17 68530777 68530934 -26741717 + B3A SINE B2 4 164 -34 4 1107 306 325 111 23 chr17 68530955 68531172 -26741479 + L1M2 LINE L1 5469 5704 -587 4 1107 452 277 24 31 chr17 68531216 68531436 -26741215 + L1MB2 LINE L1 6543 6759 -123 3 1107 1948 178 35 14 chr17 68532075 68532445 -26740206 - ORR1C1 LTR MaLR 0 378 1 4 1107 252 298 0 69 chr17 68534416 68534517 -26738134 + LTR16C LTR ERVL 387 480 -9 5 1107 432 208 0 0 chr17 68535380 68535481 -26737170 + (CA)n Simple_repeat Simple_repeat 1 101 0 5 1107 388 275 220 10 chr17 68535620 68535829 -26736822 - L1MA5 LINE L1 -2 6298 6046 5 1107 389 295 15 23 chr17 68536257 68536389 -26736262 + MIR SINE MIR 105 235 -27 5 1107 329 206 206 0 chr17 68536808 68536900 -26735751 + ORR1E LTR MaLR 13 123 -236 5 1107 329 40 40 0 chr17 68538242 68538292 -26734359 + (TAAAA)n Simple_repeat Simple_repeat 4 55 0 5 1107 1228 54 0 0 chr17 68538775 68538922 -26733729 + B1_Mm SINE Alu 1 147 0 5 1107 241 247 0 51 chr17 68539690 68539851 -26732800 + CT-rich Low_complexity Low_complexity 1 152 0 5 1107 526 223 34 61 chr17 68539876 68540024 -26732627 + B1_Mur1 SINE Alu 4 147 -2 5 1107 1994 106 164 87 chr17 68540064 68540479 -26732172 - LTRIS5 LTR ERV1 0 447 1 5 1107 6507 183 55 11 chr17 68541359 68541410 -26731241 - Lx5 LINE L1 -178 6872 6822 6 1107 495 0 0 0 chr17 68541410 68541465 -26731186 + (CAGG)n Simple_repeat Simple_repeat 1 55 0 6 1107 11120 156 58 10 chr17 68541465 68544259 -26728392 - Lx5 LINE L1 -229 6821 3879 6 1107 2610 113 0 8 chr17 68544261 68544653 -26727998 + Lx5 LINE L1 3488 3876 -2001 6 1107 2135 116 28 0 chr17 68544866 68545184 -26727467 + ORR1A4 LTR MaLR 3 329 0 6 1107 316 315 138 43 chr17 68545531 68546111 -26726540 - L1M5 LINE L1 -952 5194 4560 6 1107 302 217 0 14 chr17 68546537 68546607 -26726044 - Lx7 LINE L1 0 7696 7628 6 1107 588 347 45 31 chr17 68546630 68547079 -26725572 + L1MC4a LINE L1 6138 6592 -1290 6 1107 416 35 17 0 chr17 68547711 68547769 -26724882 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 1107 809 289 29 67 chr17 68548189 68548534 -26724117 + MTEa LTR MaLR 3 334 -45 6 1107 3303 24 39 0 chr17 68549287 68549668 -26722983 - MTA_Mm LTR MaLR 0 396 1 6 138 9251 32 6 2 chr17 68549668 68550761 -26721890 - MTA_Mm-int LTR MaLR 0 1098 1 6 1108 3303 24 39 0 chr17 68550761 68551142 -26721509 - MTA_Mm LTR MaLR 0 396 1 6 1108 962 180 33 103 chr17 68551219 68551334 -26721317 + URR1B DNA MER1_type 1 95 -130 6 1108 1219 136 16 0 chr17 68551334 68551525 -26721126 - B2_Mm2 SINE B2 0 195 2 7 1108 962 180 33 103 chr17 68551525 68551651 -26721000 + URR1B DNA MER1_type 96 225 0 6 1108 282 29 0 0 chr17 68552118 68552153 -26720498 + (CTAAA)n Simple_repeat Simple_repeat 3 37 0 7 1108 439 306 57 29 chr17 68552323 68552532 -26720119 - ORR1E LTR MaLR -26 333 119 7 1108 763 252 24 24 chr17 68552803 68553014 -26719637 + B3 SINE B2 4 214 -2 7 1108 2729 163 136 18 chr17 68553065 68553237 -26719414 + RLTR17 LTR ERVK 1 166 -526 7 1108 663 78 0 0 chr17 68553237 68553327 -26719324 + (GA)n Simple_repeat Simple_repeat 1 90 0 7 1108 2729 163 136 18 chr17 68553327 68553759 -26718892 + RLTR17 LTR ERVK 167 675 -17 7 1108 183 80 0 0 chr17 68554362 68554387 -26718264 + (T)n Simple_repeat Simple_repeat 1 25 0 7 1108 1250 48 0 0 chr17 68554474 68554620 -26718031 + B1_Mm SINE Alu 2 147 0 7 1108 32 0 0 0 chr17 68554620 68554652 -26717999 + AT_rich Low_complexity Low_complexity 1 32 0 7 1108 622 185 156 0 chr17 68554657 68554830 -26717821 + Lx9 LINE L1 7415 7614 -30 7 1108 183 309 58 58 chr17 68555782 68555868 -26716783 + L2c LINE L2 3282 3367 -20 8 1108 670 282 29 0 chr17 68556200 68556374 -26716277 + B3A SINE B2 1 179 -19 8 1108 225 298 160 0 chr17 68556426 68556520 -26716131 + PB1D10 SINE Alu 1 109 -8 8 1108 803 189 18 6 chr17 68556858 68557023 -26715628 - RMER5 LTR ERV1 0 534 368 8 1108 356 184 145 0 chr17 68557030 68557106 -26715545 + B3 SINE B2 2 88 -128 8 1108 1175 215 83 94 chr17 68557187 68557547 -26715104 - RMER5 LTR ERV1 -165 369 14 8 1108 914 103 24 12 chr17 68558071 68558238 -26714413 + (GGGA)n Simple_repeat Simple_repeat 4 172 0 8 1108 2161 110 3 0 chr17 68559343 68559652 -26712999 - Lx2 LINE L1 -1027 5970 5661 8 1108 433 103 141 0 chr17 68559652 68559730 -26712921 + Lx LINE L1 6553 6641 -13 8 1108 384 22 0 0 chr17 68559730 68559775 -26712876 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 1108 495 0 0 0 chr17 68562570 68562625 -26710026 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 8 1108 1305 81 0 0 chr17 68563683 68563984 -26708667 + (TG)n Simple_repeat Simple_repeat 1 301 0 9 1108 470 184 194 0 chr17 68563998 68564101 -26708550 - RSINE1 SINE B4 -41 124 2 9 1108 2367 145 17 17 chr17 68564327 68564748 -26707903 + MTC LTR MaLR 1 421 0 9 1108 462 252 55 0 chr17 68564821 68564948 -26707703 - L1MA9 LINE L1 -381 5931 5798 9 1108 336 241 156 0 chr17 68564985 68565133 -26707518 - L1_Mm LINE L1 -1331 4552 4373 9 1108 326 152 34 51 chr17 68565133 68565251 -26707400 + CT-rich Low_complexity Low_complexity 3 118 0 9 1108 2050 171 29 25 chr17 68565254 68565747 -26706904 - L1_Mur2 LINE L1 -4513 1364 874 9 1108 21 0 0 0 chr17 68566771 68566792 -26705859 + AT_rich Low_complexity Low_complexity 1 21 0 9 1108 282 316 13 0 chr17 68567134 68567210 -26705441 - ID4 SINE ID -5 78 2 9 1108 197 178 0 22 chr17 68567320 68567366 -26705285 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 1108 550 316 53 5 chr17 68567383 68567590 -26705061 - B4A SINE B4 -68 224 8 1 1108 2256 42 73 3 chr17 68568700 68569013 -26703638 - ORR1A1 LTR MaLR 0 346 12 1 1108 333 0 0 0 chr17 68569746 68569783 -26702868 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1108 270 0 0 0 chr17 68569783 68569812 -26702839 + (GA)n Simple_repeat Simple_repeat 1 30 0 1 1108 794 320 45 17 chr17 68569989 68570361 -26702290 - Lx7 LINE L1 -1677 5967 5587 1 1108 1124 70 0 0 chr17 68570650 68570792 -26701859 + B1_Mus2 SINE Alu 1 142 -5 1 1108 366 23 0 0 chr17 68571416 68571459 -26701192 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1108 906 280 120 41 chr17 68573016 68573526 -26699125 - Lx8 LINE L1 -1 7472 6923 1 1108 1967 171 27 13 chr17 68573600 68573973 -26698678 + ORR1B1 LTR MaLR 9 386 -8 1 1108 312 320 56 45 chr17 68573978 68574266 -26698385 - L1MB1 LINE L1 -290 5878 5588 1 1108 183 240 60 0 chr17 68574529 68574579 -26698072 - L2 LINE L2 -609 2810 2758 1 1108 301 187 32 29 chr17 68574608 68574698 -26697953 + PB1D10 SINE Alu 14 102 -18 1 1108 396 0 0 0 chr17 68574715 68574759 -26697892 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1108 2494 165 48 40 chr17 68574858 68575381 -26697270 - RLTR11A2 LTR ERVK 0 527 1 1 1108 1042 77 0 0 chr17 68575912 68576055 -26696596 + B1_Mus1 SINE Alu 6 148 0 1 1108 305 82 0 20 chr17 68576056 68576106 -26696545 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 1 1108 252 0 0 0 chr17 68576412 68576440 -26696211 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1108 10769 99 33 45 chr17 68576755 68578609 -26694042 - RLTR22_Mur LTR ERVK -14 1834 3 1 1108 3072 85 2 0 chr17 68578735 68579134 -26693517 + MTB LTR MaLR 1 400 0 1 1108 348 24 0 0 chr17 68579787 68579828 -26692823 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1108 491 215 0 18 chr17 68580055 68580164 -26692487 + RLTR42-int LTR ERVK 4005 4111 -1411 1 1108 537 219 261 18 chr17 68580555 68580781 -26691870 + RLTR42-int LTR ERVK 4253 4533 -989 1 1108 195 139 0 0 chr17 68581082 68581118 -26691533 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1108 23 86 0 0 chr17 68581222 68581280 -26691371 + AT_rich Low_complexity Low_complexity 1 58 0 1 1108 260 286 33 28 chr17 68581357 68581510 -26691141 + B4 SINE B4 24 224 -68 1 1108 256 108 45 15 chr17 68581510 68581576 -26691075 + A-rich Low_complexity Low_complexity 4 71 0 1 1108 381 75 0 0 chr17 68581631 68581684 -26690967 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1108 305 203 0 28 chr17 68583247 68583318 -26689333 - MTE2b LTR MaLR 0 379 311 1 1108 2407 84 39 14 chr17 68583333 68583695 -26688956 + Lx3_Mus LINE L1 6639 7009 0 1 1108 1069 290 22 16 chr17 68583713 68584032 -26688619 - MTE2b LTR MaLR -54 325 5 1 1108 266 258 55 22 chr17 68584130 68584221 -26688430 + ORR1E LTR MaLR 25 118 -241 1 1108 644 251 58 24 chr17 68585506 68585614 -26687037 - B3 SINE B2 0 216 100 1 1108 381 43 0 0 chr17 68585614 68585661 -26686990 + (GA)n Simple_repeat Simple_repeat 1 47 0 1 1108 644 251 58 24 chr17 68585661 68585760 -26686891 - B3 SINE B2 -117 99 2 1 1108 22 0 0 0 chr17 68586175 68586197 -26686454 + AT_rich Low_complexity Low_complexity 1 22 0 1 1108 204 67 0 0 chr17 68586936 68586966 -26685685 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1108 498 262 51 51 chr17 68586991 68587148 -26685503 - RSINE1 SINE B4 -7 158 2 1 1108 24 0 0 0 chr17 68587332 68587356 -26685295 + AT_rich Low_complexity Low_complexity 1 24 0 1 1108 210 118 0 0 chr17 68587986 68588020 -26684631 + (ATTG)n Simple_repeat Simple_repeat 3 36 0 1 1108 1011 103 0 31 chr17 68588181 68588341 -26684310 + L1_Mur1 LINE L1 3973 4127 -1759 1 1108 258 196 0 0 chr17 68588493 68588549 -26684102 - URR1B DNA MER1_type -60 165 110 1 1108 197 83 28 0 chr17 68589998 68590034 -26682617 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 1 1108 285 29 0 0 chr17 68590040 68590074 -26682577 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1108 774 32 0 0 chr17 68590074 68590166 -26682485 + (GA)n Simple_repeat Simple_repeat 2 94 0 1 1108 180 231 0 0 chr17 68590171 68590223 -26682428 + (CATA)n Simple_repeat Simple_repeat 4 55 0 1 1108 315 96 0 0 chr17 68590250 68590302 -26682349 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1108 3624 177 22 3 chr17 68590409 68591043 -26681608 - Lx LINE L1 -4 6650 6005 1 1108 3044 99 0 0 chr17 68591043 68591458 -26681193 + Lx LINE L1 5610 6024 -630 1 1108 479 17 17 0 chr17 68591520 68591580 -26681071 + (CATCC)n Simple_repeat Simple_repeat 5 65 0 1 1108 180 158 0 0 chr17 68591711 68591749 -26680902 + GA-rich Low_complexity Low_complexity 3 40 0 1 1108 403 300 117 18 chr17 68593714 68593877 -26678774 - B3A SINE B2 -16 182 4 1 1108 674 269 14 45 chr17 68593889 68594111 -26678540 - B3 SINE B2 0 216 2 1 1108 345 24 0 0 chr17 68594351 68594393 -26678258 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1108 815 221 82 0 chr17 68595303 68595444 -26677207 + B3 SINE B2 6 153 -63 1 1108 486 0 0 0 chr17 68595444 68595498 -26677153 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1108 815 221 82 0 chr17 68595498 68595551 -26677100 + B3 SINE B2 154 215 -1 1 1108 557 203 2 18 chr17 68595888 68596020 -26676631 - MTC LTR MaLR -54 367 241 1 1108 396 200 0 0 chr17 68596639 68596724 -26675927 + CT-rich Low_complexity Low_complexity 2 86 0 1 1108 331 314 76 52 chr17 68597150 68597439 -26675212 - L1MDb LINE L1 -4999 1410 1115 1 1108 1447 150 0 25 chr17 68597462 68597742 -26674909 - RMER6C LTR ERVK 0 690 418 1 1108 1014 172 110 0 chr17 68597818 68598027 -26674624 - RMER6C LTR ERVK -488 232 1 1 1108 5006 67 3 12 chr17 68598474 68599128 -26673523 - L1Md_F2 LINE L1 0 6582 5935 1 1108 230 91 0 0 chr17 68599128 68599161 -26673490 + L1Md_F2 LINE L1 5925 5957 -627 1 1108 1341 304 17 52 chr17 68599175 68599654 -26672997 - MT2A LTR ERVL -71 462 1 1 1108 303 164 18 0 chr17 68599654 68599709 -26672942 - MERVL_2A-int LTR ERVL 0 5761 5706 1 1108 237 221 28 42 chr17 68599709 68599780 -26672871 - ORR1A3-int LTR MaLR -1328 635 566 1 1108 1478 261 136 9 chr17 68599913 68600362 -26672289 - MERVL_2A-int LTR ERVL -1834 3927 3422 1 1108 1798 29 4 24 chr17 68600364 68600610 -26672041 - MTB LTR MaLR 0 400 160 1 1108 273 167 0 0 chr17 68601731 68601785 -26670866 + GA-rich Low_complexity Low_complexity 2 55 0 1 1108 1499 168 101 52 chr17 68601996 68602361 -26670290 - ORR1C2 LTR MaLR 0 384 2 1 1108 195 345 23 0 chr17 68602364 68602451 -26670200 - MIRb SINE MIR -91 177 89 1 1108 2126 148 99 8 chr17 68603457 68603839 -26668812 + MTC LTR MaLR 5 421 0 1 1108 263 267 27 0 chr17 68603900 68603975 -26668676 + PB1D10 SINE Alu 41 117 0 1 1108 230 120 0 39 chr17 68604118 68604170 -26668481 + A-rich Low_complexity Low_complexity 2 51 0 1 1108 282 29 0 0 chr17 68606673 68606708 -26665943 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1108 180 0 0 0 chr17 68607285 68607305 -26665346 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1 1108 3697 120 72 18 chr17 68607408 68607976 -26664675 - MT2B LTR ERVL 0 601 3 1 1108 544 300 33 174 chr17 68608074 68608498 -26664153 - MTE2a LTR MaLR -15 364 1 1 1108 232 120 40 0 chr17 68608850 68608900 -26663751 + (TATG)n Simple_repeat Simple_repeat 3 54 0 1 1108 345 214 14 0 chr17 68608902 68608972 -26663679 - B4A SINE B4 0 292 222 1 1108 253 194 10 70 chr17 68609095 68609136 -26663515 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 1 1108 186 71 0 0 chr17 68609136 68609164 -26663487 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 1 1108 253 194 10 70 chr17 68609164 68609222 -26663429 + (CAAA)n Simple_repeat Simple_repeat 3 58 0 1 1108 4167 239 31 9 chr17 68609248 68610202 -26662449 - Lx7 LINE L1 -345 7351 6377 1 1108 238 330 17 67 chr17 68610217 68610337 -26662314 - PB1D9 SINE Alu -6 114 1 1 1108 636 335 12 0 chr17 68610337 68610422 -26662229 - B4A SINE B4 -205 87 1 1 1108 553 214 51 0 chr17 68611145 68611262 -26661389 + MTEa LTR MaLR 1 123 -256 1 1108 302 207 40 139 chr17 68611626 68611727 -26660924 + MTEa LTR MaLR 128 218 -161 1 1108 713 279 130 61 chr17 68611923 68612101 -26660550 + MTE-int LTR MaLR 6 212 -1368 1 1108 1167 76 0 0 chr17 68612101 68612245 -26660406 + B1_Mus1 SINE Alu 1 144 -4 1 1108 713 279 130 61 chr17 68612245 68612380 -26660271 + MTE-int LTR MaLR 213 336 -1244 1 1108 266 0 0 29 chr17 68612380 68612415 -26660236 + (TTA)n Simple_repeat Simple_repeat 1 34 0 1 1108 713 279 130 61 chr17 68612415 68612524 -26660127 + MTE-int LTR MaLR 337 458 -1122 1 1108 769 249 26 60 chr17 68612776 68613045 -26659606 + MTEa LTR MaLR 120 379 0 1 1108 1994 82 38 62 chr17 68613384 68613724 -26658927 - IAPLTR1a_Mm LTR ERVK -5 332 1 1 1108 298 117 0 48 chr17 68614083 68614146 -26658505 + (CATATA)n Simple_repeat Simple_repeat 2 61 0 1 1108 234 338 0 0 chr17 68614280 68614351 -26658300 - tRNA-Ala-GCA tRNA tRNA -3 72 2 1 1108 1104 257 29 0 chr17 68616970 68617250 -26655401 - B4A SINE B4 0 292 5 1 1108 258 231 38 0 chr17 68617275 68617350 -26655301 - ID4_ SINE ID 0 83 4 1 1108 551 233 0 24 chr17 68617350 68617473 -26655178 - PB1D7 SINE Alu 0 120 1 1 1108 233 246 16 0 chr17 68619494 68619555 -26653096 + MamRep605 Unknown Unknown 461 522 -354 1 1108 350 323 97 0 chr17 68620282 68620406 -26652245 - B1F2 SINE Alu -8 141 6 1 1108 29 28 0 0 chr17 68622338 68622374 -26650277 + AT_rich Low_complexity Low_complexity 1 36 0 1 1108 558 0 0 0 chr17 68624878 68624940 -26647711 + (GA)n Simple_repeat Simple_repeat 1 62 0 1 1108 350 272 51 190 chr17 68626155 68626324 -26646327 - B4A SINE B4 -119 173 30 1 1108 213 39 0 0 chr17 68626324 68626350 -26646301 + (CCCTAA)n Simple_repeat Simple_repeat 6 31 0 1 1108 350 272 51 190 chr17 68626350 68626375 -26646276 - B4A SINE B4 -263 29 6 1 1108 276 330 26 35 chr17 68627298 68627411 -26645240 - B1F SINE Alu -1 148 37 1 1108 273 346 0 55 chr17 68627511 68627621 -26645030 - RMER12 LTR ERVK -471 851 748 1 1108 623 250 19 32 chr17 68627581 68627738 -26644913 - B4A SINE B4 0 292 138 1 1108 558 226 0 0 chr17 68627890 68628027 -26644624 + (TA)n Simple_repeat Simple_repeat 1 137 0 1 1108 291 306 51 102 chr17 68629430 68629622 -26643029 - MTD LTR MaLR -214 205 18 1 1108 200 176 0 0 chr17 68629680 68629714 -26642937 + (GTGTG)n Simple_repeat Simple_repeat 5 38 0 1 1108 236 286 0 0 chr17 68629714 68629777 -26642874 - B1F1 SINE Alu -10 139 77 2 1108 21 0 0 0 chr17 68631866 68631887 -26640764 + AT_rich Low_complexity Low_complexity 1 21 0 2 1108 1555 226 39 11 chr17 68633132 68633490 -26639161 - ORR1D1 LTR MaLR 0 374 7 2 1108 487 112 11 11 chr17 68633600 68633690 -26638961 + (TCTA)n Simple_repeat Simple_repeat 4 93 0 2 1108 207 0 0 0 chr17 68633693 68633716 -26638935 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 2 1108 252 0 0 0 chr17 68635185 68635213 -26637438 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1108 867 70 0 0 chr17 68635213 68635327 -26637324 + (GA)n Simple_repeat Simple_repeat 1 115 0 2 1108 278 263 157 29 chr17 68635347 68635449 -26637202 - RSINE1 SINE B4 -36 129 15 2 1108 771 276 146 47 chr17 68635601 68636026 -26636625 - RMER5 LTR ERV1 -15 519 53 2 1108 369 0 0 0 chr17 68636053 68636094 -26636557 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1108 847 280 44 25 chr17 68637270 68637545 -26635106 - Lx8 LINE L1 -326 7147 6868 2 1108 2553 176 129 66 chr17 68638184 68638913 -26633738 + RLTR40 LTR ERVK 7 781 -36 2 1108 222 176 19 19 chr17 68640154 68640226 -26632425 + GA-rich Low_complexity Low_complexity 1 72 0 2 1108 339 96 0 0 chr17 68640241 68640293 -26632358 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 1108 540 106 0 0 chr17 68640293 68640387 -26632264 + (GA)n Simple_repeat Simple_repeat 2 95 0 2 1108 1599 230 71 60 chr17 68641453 68642003 -26630648 + RLTR40 LTR ERVK 21 576 -241 2 1108 392 245 20 0 chr17 68642017 68642115 -26630536 + RLTR40 LTR ERVK 680 779 -38 2 1108 1074 91 0 0 chr17 68642511 68642654 -26629997 - B1_Mus1 SINE Alu -5 143 1 2 1108 1775 316 60 25 chr17 68643351 68644145 -26628506 + MTE-int LTR MaLR 706 1527 -53 2 1108 292 328 53 8 chr17 68644145 68644277 -26628374 + ORR1E LTR MaLR 1 138 -221 2 1108 1706 202 28 8 chr17 68644786 68645145 -26627506 + ORR1D1 LTR MaLR 5 370 -4 2 1108 1789 135 14 57 chr17 68645200 68645569 -26627082 + ORR1B1 LTR MaLR 42 394 0 2 1108 2021 134 44 41 chr17 68646007 68646373 -26626278 + IAPLTR1_Mm LTR ERVK 1 367 0 2 1108 56753 29 5 14 chr17 68646373 68652909 -26619742 + IAPEz-int LTR ERVK 8 6481 0 2 1108 2035 131 44 41 chr17 68652909 68653275 -26619376 + IAPLTR1_Mm LTR ERVK 1 367 0 2 1108 261 0 0 0 chr17 68653837 68653866 -26618785 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1108 1855 162 67 3 chr17 68653910 68654256 -26618395 + ORR1C1 LTR MaLR 3 370 -8 2 1108 1066 244 19 107 chr17 68655054 68655466 -26617185 + MTE2a LTR MaLR 4 379 0 2 1108 251 238 6 18 chr17 68656647 68656733 -26615918 - B1F SINE Alu -8 141 61 2 1108 555 223 0 0 chr17 68656733 68656881 -26615770 + (TG)n Simple_repeat Simple_repeat 1 148 0 2 1108 284 186 0 79 chr17 68656881 68656957 -26615694 - Lx8 LINE L1 -1285 6188 6119 2 1108 779 293 111 12 chr17 68657110 68657369 -26615282 + Lx7 LINE L1 5589 5881 -1815 2 1108 206 32 0 31 chr17 68657369 68657401 -26615250 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1108 779 293 111 12 chr17 68657401 68657473 -26615178 + Lx7 LINE L1 5882 5953 -1743 2 1108 225 0 0 0 chr17 68658347 68658372 -26614279 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2 1108 805 280 26 29 chr17 68658938 68659210 -26613441 + MTD LTR MaLR 1 271 -148 2 1108 1821 115 20 47 chr17 68659281 68659303 -26613348 - Lx3A LINE L1 0 6981 6969 2 1108 309 109 0 0 chr17 68659303 68659349 -26613302 + (CTTA)n Simple_repeat Simple_repeat 2 47 0 2 1108 1821 115 20 47 chr17 68659349 68659627 -26613024 - Lx3A LINE L1 -13 6968 6689 2 1108 1673 89 19 4 chr17 68659795 68660054 -26612597 - MT2B LTR ERVL 0 601 339 2 1108 254 224 232 10 chr17 68660052 68660151 -26612500 + RLTR19B LTR ERVK 595 715 0 2 1108 618 173 27 9 chr17 68660571 68660682 -26611969 + B1_Mur2 SINE Alu 24 136 -13 2 1108 325 19 35 69 chr17 68660682 68660740 -26611911 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 2 1108 345 131 0 0 chr17 68661149 68661210 -26611441 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 1108 198 0 0 0 chr17 68662246 68662268 -26610383 + (ATTG)n Simple_repeat Simple_repeat 3 24 0 2 1108 1272 172 0 29 chr17 68662270 68662510 -26610141 - Lx4B LINE L1 -12 7046 6814 2 1108 2934 122 29 2 chr17 68662510 68662952 -26609699 + Lx4B LINE L1 6273 6726 -332 2 1108 324 0 0 0 chr17 68663283 68663319 -26609332 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2 1108 209 161 0 0 chr17 68664390 68664421 -26608230 + polypurine Low_complexity Low_complexity 2 32 0 2 1108 25 0 0 0 chr17 68664732 68664757 -26607894 + AT_rich Low_complexity Low_complexity 1 25 0 2 1108 294 362 75 11 chr17 68665045 68665232 -26607419 + ORR1E LTR MaLR 1 199 -160 2 1108 2484 46 0 3 chr17 68665389 68665694 -26606957 - L1Md_F2 LINE L1 -12 6570 6267 2 1108 1415 52 11 0 chr17 68667741 68667915 -26604736 + L1_Mus1 LINE L1 6392 6567 0 2 1108 277 303 78 99 chr17 68668049 68668291 -26604360 + MIR SINE MIR 7 243 -19 2 1108 599 320 74 7 chr17 68669083 68669366 -26603285 - MT2A LTR ERVL -93 440 139 2 1108 541 167 50 25 chr17 68669405 68669518 -26603133 + CT-rich Low_complexity Low_complexity 46 166 0 2 1108 1092 17 0 82 chr17 68669518 68669714 -26602937 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 2 1108 541 167 50 25 chr17 68669714 68669760 -26602891 + polypyrimidine Low_complexity Low_complexity 3 45 0 2 1108 1078 88 0 0 chr17 68669774 68669910 -26602741 - B1_Mus1 SINE Alu -8 140 5 2 1108 333 345 35 0 chr17 68669922 68670035 -26602616 - MTEa LTR MaLR -262 117 1 2 1108 25 0 0 0 chr17 68671240 68671265 -26601386 + AT_rich Low_complexity Low_complexity 1 25 0 2 1108 576 73 0 0 chr17 68671759 68671841 -26600810 + (TG)n Simple_repeat Simple_repeat 1 82 0 2 1108 297 297 122 0 chr17 68671843 68671917 -26600734 - PB1D10 SINE Alu -31 86 4 2 1108 273 313 42 34 chr17 68671917 68671961 -26600690 - MT2B LTR ERVL -356 244 126 2 1108 237 83 0 0 chr17 68674345 68674381 -26598270 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1108 273 320 79 107 chr17 68674398 68674688 -26597963 - B4A SINE B4 -10 282 1 2 1108 198 208 0 0 chr17 68674986 68675034 -26597617 + CT-rich Low_complexity Low_complexity 4 51 0 2 1108 540 256 7 29 chr17 68676095 68676232 -26596419 + B3 SINE B2 2 135 -81 2 1108 270 255 154 60 chr17 68676232 68676466 -26596185 - L1M3c LINE L1 -2414 3793 3557 2 1108 532 291 165 36 chr17 68676601 68677016 -26595635 - L1M3c LINE L1 -2642 3562 3096 2 1108 189 0 0 0 chr17 68677016 68677037 -26595614 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 1108 532 291 165 36 chr17 68677037 68677305 -26595346 - L1M3c LINE L1 -3109 3095 2792 2 1108 279 225 0 0 chr17 68677314 68677385 -26595266 + (TG)n Simple_repeat Simple_repeat 2 72 0 2 1108 369 209 29 66 chr17 68677550 68677659 -26594992 - PB1D10 SINE Alu -29 120 1 2 1108 552 277 10 74 chr17 68677889 68678092 -26594559 + Lx9 LINE L1 7157 7346 -298 2 1108 308 33 82 16 chr17 68678498 68678559 -26594092 + (GGGTG)n Simple_repeat Simple_repeat 3 67 0 2 1108 232 338 61 26 chr17 68678660 68678724 -26593927 - L1M2 LINE L1 -420 5880 5814 2 1108 1263 94 71 11 chr17 68678724 68678907 -26593744 - B2_Mm2 SINE B2 0 195 2 2 1108 274 326 50 12 chr17 68678907 68679086 -26593565 - L1M2 LINE L1 -487 5813 5627 2 1108 437 236 128 45 chr17 68679203 68679336 -26593315 - Lx7 LINE L1 -463 7233 7090 2 1108 278 297 137 10 chr17 68679546 68679743 -26592908 - L1M3c LINE L1 -5011 1130 909 2 1108 1226 247 33 16 chr17 68679926 68680231 -26592420 - RMER15 LTR ERVL 0 575 266 2 1108 325 237 17 103 chr17 68680508 68680682 -26591969 - L1MEg LINE L1 -5220 864 706 2 1108 1407 101 37 0 chr17 68681472 68681660 -26590991 + B2_Mm2 SINE B2 1 195 0 2 138 823 229 52 28 chr17 68681672 68681883 -26590768 - B3 SINE B2 0 216 1 2 1109 429 113 61 30 chr17 68682396 68682560 -26590091 + (TG)n Simple_repeat Simple_repeat 1 169 0 2 1109 298 96 54 14 chr17 68682602 68682676 -26589975 + (TG)n Simple_repeat Simple_repeat 1 77 0 2 1109 265 280 18 27 chr17 68682689 68682799 -26589852 - L1MA4 LINE L1 -398 5902 5794 2 1109 298 310 110 67 chr17 68683260 68683605 -26589046 - Kanga1 DNA Tc2 -31 1714 1351 2 1109 556 67 181 0 chr17 68683605 68683710 -26588941 - L1_Mus4 LINE L1 -10 6626 6503 2 1109 298 310 110 67 chr17 68683710 68683765 -26588886 - Kanga1 DNA Tc2 -395 1350 1298 2 1109 24 53 0 0 chr17 68684858 68684896 -26587755 + AT_rich Low_complexity Low_complexity 1 38 0 2 1109 268 427 8 0 chr17 68684932 68685049 -26587602 - PB1 SINE Alu -7 120 3 2 1109 441 317 83 40 chr17 68685384 68685734 -26586917 - MLT1K LTR MaLR -3 592 187 2 1109 208 182 0 22 chr17 68685908 68685953 -26586698 + A-rich Low_complexity Low_complexity 3 46 0 2 1109 581 244 24 0 chr17 68686559 68686682 -26585969 - B1_Mur3 SINE Alu -23 126 1 2 1109 343 331 44 56 chr17 68686682 68686731 -26585920 - B4 SINE B4 -205 87 41 2 1109 1360 92 26 46 chr17 68686788 68686982 -26585669 - B2_Mm1t SINE B2 -3 190 1 2 1109 866 289 4 24 chr17 68688278 68688530 -26584121 + MLT1D LTR MaLR 259 505 0 2 1109 793 287 28 0 chr17 68689498 68689714 -26582937 - MER2B DNA MER2_type -20 316 95 2 1109 308 275 18 44 chr17 68690436 68690550 -26582101 - L1MB7 LINE L1 -1175 6867 6757 2 1109 454 136 9 19 chr17 68692364 68692469 -26580182 + (TCTG)n Simple_repeat Simple_repeat 2 105 0 2 1109 420 55 0 0 chr17 68692473 68692528 -26580123 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1109 779 96 40 7 chr17 68692563 68692842 -26579809 + (TCTA)n Simple_repeat Simple_repeat 1 288 0 2 1109 503 307 12 68 chr17 68692873 68692888 -26579763 - RSINE1 SINE B4 -2 163 150 2 1109 342 45 0 0 chr17 68692888 68692932 -26579719 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1109 503 307 12 68 chr17 68692932 68693077 -26579574 - RSINE1 SINE B4 -16 149 12 2 1109 756 311 76 24 chr17 68693180 68693558 -26579093 - L1MA6 LINE L1 -306 5994 5594 2 1109 282 29 0 0 chr17 68693558 68693593 -26579058 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1109 756 317 89 41 chr17 68693593 68693835 -26578816 - L1MA6 LINE L1 -707 5593 5345 2 1109 1793 297 116 65 chr17 68693847 68695912 -26576739 - L1MB7 LINE L1 -1 6183 4017 2 1109 7408 79 42 3 chr17 68696877 68698259 -26574392 + L1_Mus1 LINE L1 5129 6566 -1 2 1109 882 54 0 0 chr17 68698268 68698380 -26574271 + (GAAA)n Simple_repeat Simple_repeat 2 113 0 2 1109 36301 72 7 11 chr17 68699011 68705228 -26567423 - L1Md_F3 LINE L1 -2 6582 401 2 1109 382 83 0 27 chr17 68705410 68705484 -26567167 + (TTTTG)n Simple_repeat Simple_repeat 1 72 0 2 1109 1086 50 0 54 chr17 68705712 68705859 -26566792 - L1_Mus1 LINE L1 -1 6566 6428 3 1109 447 19 0 0 chr17 68706356 68706408 -26566243 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1109 192 247 23 125 chr17 68706797 68706885 -26565766 - L2c LINE L2 -228 3159 3081 3 1109 201 326 112 35 chr17 68707172 68707315 -26565336 - MER91A DNA Tip100 -42 154 1 3 1109 2340 167 45 33 chr17 68708030 68708452 -26564199 - Lx5 LINE L1 -2 7048 6622 3 1109 23 0 0 0 chr17 68709118 68709141 -26563510 + AT_rich Low_complexity Low_complexity 1 23 0 3 1109 1107 200 14 9 chr17 68709339 68709551 -26563100 - ORR1C1 LTR MaLR 0 378 166 3 1109 597 181 5 48 chr17 68709561 68709747 -26562904 + GA-rich Low_complexity Low_complexity 2 179 0 3 1109 919 184 45 0 chr17 68709751 68709930 -26562721 - ORR1C1 LTR MaLR -191 187 1 3 1109 609 267 110 45 chr17 68709930 68710129 -26562522 - B4 SINE B4 -80 212 1 3 1109 669 288 94 107 chr17 68710571 68710870 -26561781 - MLT2D LTR ERVL -45 369 58 3 1109 1499 312 89 30 chr17 68710973 68711141 -26561510 - Lx8 LINE L1 -531 6942 6781 3 1109 3789 36 19 28 chr17 68711141 68711604 -26561047 + L1Md_F3 LINE L1 6126 6584 0 3 1109 1499 312 89 30 chr17 68711604 68712072 -26560579 - Lx8 LINE L1 -693 6780 6268 3 1109 1052 106 6 16 chr17 68712090 68712272 -26560379 + (TTC)n Simple_repeat Simple_repeat 1 180 0 3 1109 345 257 22 28 chr17 68712296 68712450 -26560201 + CT-rich Low_complexity Low_complexity 26 179 0 3 1109 1111 68 17 22 chr17 68712450 68712631 -26560020 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 3 1109 345 257 22 28 chr17 68712631 68712656 -26559995 + polypyrimidine Low_complexity Low_complexity 1 25 0 3 1109 339 305 86 27 chr17 68712688 68712885 -26559766 - HAL1-3A_ME LINE L1 -419 2439 2285 3 1109 264 134 43 29 chr17 68712946 68713015 -26559636 + CT-rich Low_complexity Low_complexity 3 72 0 3 1109 813 177 20 13 chr17 68713020 68713169 -26559482 - B1_Mur4 SINE Alu 0 150 1 3 1109 189 0 0 0 chr17 68713565 68713586 -26559065 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1109 333 287 0 0 chr17 68713981 68714117 -26558534 + (CA)n Simple_repeat Simple_repeat 2 137 0 3 1109 1860 285 157 15 chr17 68714203 68714597 -26558054 - L1M2 LINE L1 -1096 5047 4619 3 1109 735 12 0 0 chr17 68714597 68714681 -26557970 + (TTC)n Simple_repeat Simple_repeat 3 86 0 3 1109 1860 285 157 15 chr17 68714681 68715240 -26557411 - L1M2 LINE L1 -1525 4618 3958 3 1109 750 23 0 0 chr17 68715247 68715335 -26557316 + (TTCTC)n Simple_repeat Simple_repeat 2 89 0 3 1109 378 0 0 0 chr17 68715335 68715376 -26557275 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 3 1109 201 94 0 0 chr17 68715382 68715414 -26557237 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 3 1109 602 200 0 17 chr17 68715415 68715532 -26557119 - B1_Mus1 SINE Alu -21 127 13 3 1109 409 280 61 130 chr17 68715532 68715645 -26557006 - ID_B1 SINE B4 -5 219 6 3 1109 952 292 61 20 chr17 68715650 68716045 -26556606 - L1M2 LINE L1 -2175 3965 3555 3 1109 426 278 89 34 chr17 68716459 68716839 -26555812 - L1_Mur2 LINE L1 -4005 1872 1472 3 1109 4148 218 81 73 chr17 68717248 68717379 -26555272 - Lx9 LINE L1 0 7644 7520 3 1109 306 0 0 0 chr17 68717379 68717413 -26555238 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 1109 4148 218 81 73 chr17 68717413 68717589 -26555062 - Lx9 LINE L1 -125 7519 7284 3 1109 2409 117 9 0 chr17 68717589 68717913 -26554738 + ORR1A2 LTR MaLR 1 327 0 3 1109 4148 218 81 73 chr17 68717913 68718303 -26554348 - Lx9 LINE L1 -361 7283 6927 3 1109 4446 169 20 15 chr17 68718303 68718358 -26554293 - Lx4B LINE L1 -5 7053 6996 3 1109 414 0 0 0 chr17 68718358 68718404 -26554247 + (TC)n Simple_repeat Simple_repeat 1 46 0 3 1109 4446 169 20 15 chr17 68718404 68719089 -26553562 - Lx4B LINE L1 -63 6995 6310 3 1109 4148 218 81 73 chr17 68719089 68719452 -26553199 - Lx9 LINE L1 -718 6926 6574 3 1109 6938 35 1 5 chr17 68719452 68720236 -26552415 - L1Md_F2 LINE L1 0 6582 5802 3 1109 4148 218 81 73 chr17 68720236 68720383 -26552268 - Lx9 LINE L1 -1071 6573 6425 3 1109 2119 244 82 26 chr17 68721305 68721990 -26550661 - Lx9 LINE L1 -1234 6410 5688 3 1109 11765 96 26 44 chr17 68721990 68723872 -26548779 - RLTR22_Mur LTR ERVK 0 1848 1 3 1109 4072 197 71 106 chr17 68723874 68725530 -26547121 - Lx9 LINE L1 -191 5656 4059 3 1109 3271 45 2 0 chr17 68726560 68726980 -26545671 - L1Md_F2 LINE L1 0 6582 6162 3 1109 1276 38 0 0 chr17 68726976 68727133 -26545518 - L1Md_F2 LINE L1 -839 5743 5587 3 1109 32778 69 6 4 chr17 68727133 68732867 -26539784 - L1Md_F2 LINE L1 -447 6135 396 3 1109 201 219 26 64 chr17 68733211 68733289 -26539362 + L2a LINE L2 3318 3392 -34 3 1109 201 309 112 60 chr17 68734011 68734145 -26538506 + MIRb SINE MIR 7 147 -121 3 1109 22 0 0 0 chr17 68735264 68735286 -26537365 + AT_rich Low_complexity Low_complexity 1 22 0 3 1109 204 40 0 0 chr17 68735515 68735540 -26537111 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1109 230 388 8 16 chr17 68735560 68735683 -26536968 - MIR3 SINE MIR -15 193 72 3 1109 266 337 50 10 chr17 68736385 68736484 -26536167 + MER5A1 DNA MER1_type 51 153 -13 3 1109 322 289 73 107 chr17 68736917 68737199 -26535452 - MLT1E LTR MaLR -7 647 361 3 1109 314 255 67 67 chr17 68737711 68737816 -26534835 + L2c LINE L2 3276 3380 -7 3 1109 320 370 38 38 chr17 68737980 68738219 -26534432 - MIRb SINE MIR 0 268 30 3 1109 326 221 12 0 chr17 68738279 68738365 -26534286 + L1M5 LINE L1 4745 4831 -1315 3 1109 379 105 0 0 chr17 68738627 68738684 -26533967 + B1_Mur4 SINE Alu 91 147 -3 3 1109 380 118 15 0 chr17 68738731 68738799 -26533852 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 1109 450 0 0 0 chr17 68739589 68739639 -26533012 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 3 1109 269 90 29 29 chr17 68740424 68740493 -26532158 + (CAAAAA)n Simple_repeat Simple_repeat 2 70 0 3 1109 568 307 65 15 chr17 68740743 68741004 -26531647 - Charlie7 DNA MER1_type -406 2206 1933 3 1109 549 0 0 0 chr17 68741296 68741357 -26531294 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 3 1109 462 79 0 0 chr17 68741357 68741420 -26531231 + (TC)n Simple_repeat Simple_repeat 1 63 0 3 1109 845 258 183 30 chr17 68741858 68742158 -26530493 + MTE2b LTR MaLR 20 365 -14 3 1109 27 0 0 0 chr17 68743598 68743625 -26529026 + AT_rich Low_complexity Low_complexity 1 27 0 3 1109 342 22 0 0 chr17 68744294 68744339 -26528312 + L1_Mm LINE L1 4757 4801 -1082 3 1109 675 193 0 7 chr17 68744336 68744487 -26528164 - L1_Mur3 LINE L1 -2242 3638 3489 3 1109 6412 35 1 0 chr17 68744485 68745311 -26527340 + L1_Mm LINE L1 2865 3691 -2192 3 1109 477 0 0 0 chr17 68745532 68745585 -26527066 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 1109 459 0 0 0 chr17 68746267 68746318 -26526333 + (TTA)n Simple_repeat Simple_repeat 1 51 0 3 1109 474 18 0 0 chr17 68747857 68747912 -26524739 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1109 2639 156 65 20 chr17 68747922 68748427 -26524224 - Lx2 LINE L1 -23 6974 6447 3 1109 273 324 50 47 chr17 68748518 68748702 -26523949 + MIRb SINE MIR 23 219 -49 3 1109 598 201 107 35 chr17 68749630 68749766 -26522885 - B3 SINE B2 -61 134 1 3 1109 758 311 104 64 chr17 68751467 68751841 -26520810 - MLT1D LTR MaLR -34 471 81 3 1109 2977 26 3 3 chr17 68751841 68752187 -26520464 - ORR1A0 LTR MaLR 0 346 1 3 1109 758 311 104 64 chr17 68752187 68752265 -26520386 - MLT1D LTR MaLR -425 80 1 3 1109 1209 176 81 9 chr17 68752640 68752863 -26519788 + MTC LTR MaLR 175 413 -8 3 1109 475 306 258 27 chr17 68753059 68753228 -26519423 - MTD LTR MaLR -14 405 168 3 1109 1273 106 5 11 chr17 68753228 68753418 -26519233 - B2_Mm1t SINE B2 -3 190 2 3 1109 475 306 258 27 chr17 68753418 68753577 -26519074 - MTD LTR MaLR -252 167 1 3 1109 76 85 0 0 chr17 68753641 68753829 -26518822 + AT_rich Low_complexity Low_complexity 1 188 0 3 1109 315 270 162 35 chr17 68754503 68754645 -26518006 - MER5A DNA MER1_type -22 167 8 3 1109 305 284 145 8 chr17 68754749 68754866 -26517785 - MER5A DNA MER1_type 0 189 57 3 1109 247 49 0 47 chr17 68755073 68755116 -26517535 + (TTA)n Simple_repeat Simple_repeat 2 42 0 3 1109 433 374 13 6 chr17 68755131 68755290 -26517361 - RSINE1 SINE B4 0 165 6 3 1109 24404 116 17 86 chr17 68756533 68762890 -26509761 + L1_Mus2 LINE L1 676 6566 0 3 1109 297 193 35 0 chr17 68762906 68762963 -26509688 + ORR1E LTR MaLR 50 108 -251 3 1109 965 224 159 0 chr17 68762975 68763270 -26509381 - Lx8 LINE L1 -386 7087 6746 3 1109 1285 211 37 104 chr17 68763279 68763351 -26509300 - ORR1B2 LTR MaLR 0 367 322 3 1109 3839 190 48 11 chr17 68763351 68764116 -26508535 - Lx5 LINE L1 0 7050 6257 3 1109 1285 211 37 104 chr17 68764116 68764397 -26508254 - ORR1B2 LTR MaLR -46 321 38 3 1109 270 0 0 0 chr17 68764415 68764445 -26508206 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 3 1109 992 255 56 26 chr17 68764486 68764828 -26507823 - Lx8 LINE L1 -759 6714 6363 3 1109 279 296 89 36 chr17 68765064 68765176 -26507475 - ORR1E LTR MaLR -222 137 20 3 1109 462 88 0 0 chr17 68766225 68766293 -26506358 + (TG)n Simple_repeat Simple_repeat 2 69 0 3 1109 6675 44 49 1 chr17 68766509 68767637 -26505014 - L1Md_F2 LINE L1 -12 6570 5366 3 1109 304 289 24 12 chr17 68768731 68768815 -26503836 + PB1 SINE Alu 5 89 -38 3 1109 5607 221 132 29 chr17 68768821 68769231 -26503420 - RLTR22_Mur LTR ERVK -40 1808 1315 3 1109 192 125 0 0 chr17 68769231 68769263 -26503388 + (CATA)n Simple_repeat Simple_repeat 1 32 0 3 1109 5607 221 132 29 chr17 68769263 68770492 -26502159 - RLTR22_Mur LTR ERVK -534 1314 2 3 1109 267 152 0 0 chr17 68770565 68770611 -26502040 + CT-rich Low_complexity Low_complexity 4 49 0 3 1109 511 273 0 43 chr17 68771123 68771261 -26501390 - ID_B1 SINE B4 -16 208 77 3 1109 339 260 10 37 chr17 68771421 68771528 -26501123 + PB1D10 SINE Alu 13 147 0 3 1109 301 171 0 35 chr17 68772734 68772819 -26499832 + CT-rich Low_complexity Low_complexity 3 84 0 3 1109 216 97 0 0 chr17 68773031 68773062 -26499589 + (CATA)n Simple_repeat Simple_repeat 2 32 0 3 1109 576 260 186 17 chr17 68773206 68773437 -26499214 - B4A SINE B4 -14 278 9 3 1109 369 0 0 0 chr17 68773494 68773535 -26499116 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 1109 938 81 0 0 chr17 68773535 68773658 -26498993 - B1_Mus2 SINE Alu -9 138 16 3 1109 618 274 94 38 chr17 68773668 68773746 -26498905 - L1MA7 LINE L1 -78 6213 6136 3 1109 519 17 0 0 chr17 68773746 68773806 -26498845 + (TC)n Simple_repeat Simple_repeat 1 60 0 3 1109 366 23 0 0 chr17 68773806 68773848 -26498803 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 1109 231 114 0 0 chr17 68773848 68773883 -26498768 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1109 618 274 94 38 chr17 68773883 68774121 -26498530 - L1MA7 LINE L1 -156 6135 5879 3 1109 312 281 53 0 chr17 68774255 68774369 -26498282 + (TG)n Simple_repeat Simple_repeat 1 120 0 3 1109 375 211 29 38 chr17 68774382 68774703 -26497948 + (TATG)n Simple_repeat Simple_repeat 1 317 0 4 1109 445 181 38 0 chr17 68774707 68774840 -26497811 + (TG)n Simple_repeat Simple_repeat 1 138 0 4 1109 683 258 77 36 chr17 68775220 68775441 -26497210 + MIR SINE MIR 12 241 -21 4 1109 1789 185 15 56 chr17 68775529 68775923 -26496728 - Lx2A1 LINE L1 0 7008 6631 4 1109 2068 201 110 27 chr17 68776271 68776798 -26495853 + Lx5 LINE L1 6477 7047 -3 4 1109 228 263 11 0 chr17 68778078 68778173 -26494478 + Lx9 LINE L1 7520 7615 -29 4 1109 480 139 0 0 chr17 68778231 68778310 -26494341 + (GGGAGA)n Simple_repeat Simple_repeat 4 82 0 4 1109 378 0 0 0 chr17 68778839 68778881 -26493770 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1109 251 320 107 29 chr17 68779662 68779765 -26492886 + RMER10A LTR ERVL 57 167 -275 4 1109 672 296 189 13 chr17 68779952 68780328 -26492323 - MLT1D LTR MaLR -1 504 63 4 1109 1136 195 9 31 chr17 68781883 68782105 -26490546 - RLTR16 LTR ERVK -288 217 1 4 1109 362 350 0 16 chr17 68782107 68782290 -26490361 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1109 665 213 41 161 chr17 68782341 68782559 -26490092 - B4A SINE B4 0 292 101 4 1109 414 0 0 0 chr17 68782627 68782673 -26489978 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 1109 213 121 0 0 chr17 68782730 68782763 -26489888 + (TCCC)n Simple_repeat Simple_repeat 1 33 0 4 1109 261 0 0 0 chr17 68783786 68783815 -26488836 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 1109 256 24 24 24 chr17 68785892 68785934 -26486717 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 4 1109 3175 94 5 7 chr17 68786760 68787168 -26485483 + MTB_Mm LTR MaLR 1 407 0 4 1109 556 290 80 40 chr17 68788197 68788398 -26484253 - Charlie25 DNA MER1_type -1545 979 771 4 1109 449 255 0 6 chr17 68789253 68789411 -26483240 + (TG)n Simple_repeat Simple_repeat 2 158 0 4 1109 530 276 54 113 chr17 68789412 68789616 -26483035 - B3 SINE B2 -15 201 10 4 1109 1139 191 24 14 chr17 68789616 68789828 -26482823 - Lx2B LINE L1 -472 6528 6315 4 1109 1474 218 53 30 chr17 68789830 68790232 -26482419 + Lx3C LINE L1 6574 7058 0 4 1109 551 223 0 36 chr17 68790352 68790683 -26481968 + (TG)n Simple_repeat Simple_repeat 1 318 0 4 1109 6602 98 26 98 chr17 68791527 68792013 -26480638 - Lx3_Mus LINE L1 -8 7001 6577 4 1109 1274 41 0 33 chr17 68792013 68792164 -26480487 - B1_Mm SINE Alu -1 146 1 4 1109 6602 98 26 98 chr17 68792164 68792769 -26479882 - Lx3_Mus LINE L1 -433 6576 5989 4 1109 1016 125 75 0 chr17 68792769 68792929 -26479722 + L1_Mur1 LINE L1 5450 5621 -265 4 1109 773 247 102 71 chr17 68793487 68793740 -26478911 + B4 SINE B4 1 262 -30 4 1109 378 42 0 0 chr17 68793740 68793788 -26478863 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 1109 773 247 102 71 chr17 68793788 68793817 -26478834 + B4 SINE B4 263 292 0 4 1109 299 271 17 0 chr17 68793823 68793941 -26478710 + (CATA)n Simple_repeat Simple_repeat 3 122 0 4 1109 267 253 49 37 chr17 68794717 68794799 -26477852 - L1M2 LINE L1 -1142 5703 5621 4 1109 5467 148 20 11 chr17 68795124 68795969 -26476682 - Lx LINE L1 -2 6652 5800 4 1109 2463 331 116 28 chr17 68796007 68797286 -26475365 - MTE-int LTR MaLR -35 1545 155 4 1109 565 316 70 0 chr17 68797330 68797501 -26475150 - MTE2b LTR MaLR -51 328 146 4 1109 2475 136 36 17 chr17 68797506 68797919 -26474732 - RMER6B LTR ERVK -40 421 1 4 1109 531 273 33 65 chr17 68797919 68798072 -26474579 - MTE2b LTR MaLR -215 164 17 4 1109 438 293 56 16 chr17 68798249 68798374 -26474277 - ORR1E LTR MaLR 0 359 230 4 1109 365 84 23 35 chr17 68798512 68798598 -26474053 + (TTTG)n Simple_repeat Simple_repeat 2 86 0 4 1109 284 292 31 20 chr17 68798708 68798806 -26473845 - PB1D10 SINE Alu -16 101 3 4 1109 289 327 62 25 chr17 68798816 68799029 -26473622 - L1M2 LINE L1 -2413 4429 4212 4 1109 749 167 8 8 chr17 68799118 68799251 -26473400 - RLTR13D6 LTR ERVK 0 902 770 4 1109 550 127 0 0 chr17 68799251 68799330 -26473321 - ETnERV3-int LTR ERVK -195 5613 5535 4 1109 504 264 0 37 chr17 68799330 68799464 -26473187 - ETnERV3-int LTR ERVK -413 5395 5267 4 1109 5162 131 36 21 chr17 68799463 68800289 -26472362 - ETnERV2-int LTR ERVK -6361 1045 207 4 1109 508 311 89 44 chr17 68800309 68800853 -26471798 - L1M2 LINE L1 -3127 3718 3135 4 1109 459 107 0 0 chr17 68800853 68800937 -26471714 + (TCTG)n Simple_repeat Simple_repeat 3 86 0 4 1109 465 325 120 42 chr17 68800937 68801199 -26471452 - L1M2 LINE L1 -3711 3134 2851 4 1109 256 342 61 40 chr17 68801349 68801811 -26470840 - L1M2 LINE L1 -4247 2602 2136 4 1109 1176 104 3 6 chr17 68802697 68803027 -26469624 + (CA)n Simple_repeat Simple_repeat 1 328 0 4 1109 305 189 37 12 chr17 68803037 68803285 -26469366 + (TG)n Simple_repeat Simple_repeat 1 254 0 4 1109 603 128 0 58 chr17 68803323 68803514 -26469137 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1109 263 159 45 8 chr17 68803559 68803692 -26468959 + (CA)n Simple_repeat Simple_repeat 1 138 0 4 1109 203 209 18 18 chr17 68803756 68803868 -26468783 + (CA)n Simple_repeat Simple_repeat 1 112 0 4 1109 501 17 0 0 chr17 68804490 68804548 -26468103 + (GA)n Simple_repeat Simple_repeat 1 58 0 4 1109 354 286 22 36 chr17 68804833 68804971 -26467680 - L1MA7 LINE L1 -235 6056 5921 4 1109 3360 34 39 5 chr17 68805655 68806038 -26466613 - MTA_Mm LTR MaLR 0 396 1 4 1109 354 194 0 0 chr17 68806251 68806323 -26466328 + (TATATG)n Simple_repeat Simple_repeat 2 73 0 4 1109 2559 196 24 34 chr17 68807813 68807848 -26464803 - RMER5 LTR ERV1 0 534 509 4 1109 1058 186 102 5 chr17 68807848 68808053 -26464598 + URR1A DNA MER1_type 2 226 0 4 1109 2559 196 24 34 chr17 68808053 68808549 -26464102 - RMER5 LTR ERV1 -26 508 8 4 1109 22 0 0 0 chr17 68809031 68809053 -26463598 + AT_rich Low_complexity Low_complexity 1 22 0 4 1109 195 146 0 0 chr17 68809357 68809398 -26463253 + (T)n Simple_repeat Simple_repeat 1 41 0 4 1109 255 31 0 0 chr17 68809630 68809662 -26462989 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1109 234 0 0 0 chr17 68811224 68811250 -26461401 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 1109 286 294 141 0 chr17 68812134 68812226 -26460425 - ORR1E LTR MaLR -253 106 2 4 1110 2009 215 89 18 chr17 68813175 68813724 -26458927 - Lx7 LINE L1 0 7696 7109 4 1110 1038 299 85 14 chr17 68813811 68814293 -26458358 - L1MA4 LINE L1 -1567 5893 5415 4 1110 750 78 0 0 chr17 68814331 68814433 -26458218 + (TCTCCC)n Simple_repeat Simple_repeat 5 106 0 4 1110 1946 318 78 19 chr17 68814454 68815278 -26457373 - Lx7 LINE L1 -384 7312 6441 4 1110 2056 275 69 37 chr17 68815279 68816077 -26456574 + Lx7 LINE L1 5588 6409 -1064 4 1110 318 275 181 22 chr17 68816256 68816438 -26456213 + Lx7 LINE L1 6429 6639 -834 4 1110 339 254 82 56 chr17 68816563 68816749 -26455902 - L1M4 LINE L1 -509 5675 5486 4 1110 264 304 62 42 chr17 68817082 68817133 -26455518 - L1M4 LINE L1 -710 5464 5409 4 1110 180 0 0 0 chr17 68817133 68817153 -26455498 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 4 1110 264 304 62 42 chr17 68817153 68817245 -26455406 - L1M4 LINE L1 -766 5408 5318 4 1110 752 263 0 69 chr17 68817414 68817618 -26455033 - B3A SINE B2 -4 194 5 4 1110 1153 64 0 35 chr17 68817883 68818028 -26454623 + B1_Mus2 SINE Alu 2 141 -6 4 1110 1365 57 0 0 chr17 68818030 68818205 -26454446 + (GAAA)n Simple_repeat Simple_repeat 3 177 0 4 1110 977 301 66 73 chr17 68818522 68819403 -26453248 - L1M4 LINE L1 -1133 5013 4139 4 1110 377 307 60 17 chr17 68819668 68819900 -26452751 - L1M4 LINE L1 -2223 3923 3682 4 1110 591 245 105 24 chr17 68819908 68820155 -26452496 - L1M4 LINE L1 -1737 4409 4143 4 1110 231 292 32 48 chr17 68820295 68820421 -26452230 - L1M4 LINE L1 -2264 3882 3759 4 1110 2734 113 63 7 chr17 68820443 68820853 -26451798 - Lx3A LINE L1 -7 6974 6542 4 1110 1066 307 57 66 chr17 68820868 68821416 -26451235 - Lx8 LINE L1 -3 7470 6928 4 1110 689 319 59 15 chr17 68821427 68821697 -26450954 - Lx8 LINE L1 -608 6865 6584 4 1110 254 273 50 35 chr17 68822541 68822711 -26449940 + L1M2c LINE L1 2099 2333 -2223 4 1110 387 0 0 0 chr17 68822711 68822754 -26449897 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1110 235 284 80 42 chr17 68822754 68822841 -26449810 + L1M2c LINE L1 2334 2431 -2125 4 1110 207 0 0 0 chr17 68824138 68824161 -26448490 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 4 1110 230 325 23 0 chr17 68824419 68824512 -26448139 - BC1_Mm scRNA scRNA -54 98 2 4 1110 775 309 75 80 chr17 68825229 68825989 -26446662 - L1MB8 LINE L1 0 6178 5423 4 1110 250 264 158 30 chr17 68826979 68827143 -26445508 - L1MC4 LINE L1 -696 7346 7162 4 1110 543 16 0 0 chr17 68827521 68827585 -26445066 + (TAGTG)n Simple_repeat Simple_repeat 5 68 0 4 1110 487 149 95 38 chr17 68827747 68827852 -26444799 + MERVL_2A-int LTR ERVL 5649 5759 -2 4 1110 344 268 83 45 chr17 68827852 68827885 -26444766 + Ricksha_c DNA MuDR 340 377 -1671 4 1110 292 284 0 0 chr17 68828900 68828967 -26443684 + RSINE1 SINE B4 2 68 -97 4 1110 21 0 0 0 chr17 68829903 68829924 -26442727 + AT_rich Low_complexity Low_complexity 1 21 0 4 1110 326 203 0 0 chr17 68832191 68832265 -26440386 - Lx9 LINE L1 -1 7643 7570 4 1110 758 250 39 44 chr17 68832396 68832601 -26440050 - Lx9 LINE L1 -1076 6568 6365 4 1110 283 224 19 48 chr17 68832611 68832714 -26439937 + (TG)n Simple_repeat Simple_repeat 1 100 0 4 1110 201 74 0 0 chr17 68833532 68833559 -26439092 + (TAAAA)n Simple_repeat Simple_repeat 4 30 0 4 1110 372 43 0 0 chr17 68833998 68834044 -26438607 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1110 579 231 0 0 chr17 68834752 68834860 -26437791 - B1_Mur3 SINE Alu -25 124 17 4 1110 3344 69 11 5 chr17 68838884 68839322 -26433329 - L1_Mus1 LINE L1 -1 6566 6126 4 1110 258 32 0 0 chr17 68839426 68839457 -26433194 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1110 23 0 0 0 chr17 68839457 68839480 -26433171 + AT_rich Low_complexity Low_complexity 1 23 0 4 1110 563 301 170 7 chr17 68842579 68842999 -26429652 - MLT1D LTR MaLR 0 505 17 4 1110 847 280 106 23 chr17 68843011 68843314 -26429337 - MTE2b LTR MaLR -51 328 1 4 1110 1309 314 81 34 chr17 68843315 68843488 -26429163 - MTE2b-int LTR MaLR -1 1579 1397 4 1110 448 269 13 66 chr17 68843488 68843639 -26429012 + B1F2 SINE Alu 2 144 -5 4 1110 1309 314 81 34 chr17 68843639 68843996 -26428655 - MTE2b-int LTR MaLR -184 1396 1024 4 1110 564 318 111 33 chr17 68844376 68844646 -26428005 - MTE2b-int LTR MaLR -691 889 599 4 1110 468 0 0 0 chr17 68844769 68844821 -26427830 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 4 1110 513 0 0 0 chr17 68844886 68844943 -26427708 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 4 1110 242 290 51 86 chr17 68845089 68845206 -26427445 - Kanga11a DNA Tc2 -815 155 43 4 1110 210 349 100 36 chr17 68845472 68845582 -26427069 + PB1D10 SINE Alu 1 117 0 4 1110 29 38 0 19 chr17 68846121 68846139 -26426512 + AT_rich Low_complexity Low_complexity 1 18 0 4 1110 3188 74 14 0 chr17 68846139 68846558 -26426093 - L1_Mus1 LINE L1 0 6567 6143 4 1110 29 38 0 19 chr17 68846558 68846593 -26426058 + AT_rich Low_complexity Low_complexity 1 35 0 4 1110 2310 247 88 16 chr17 68846746 68847425 -26425226 - Lx7 LINE L1 -283 7413 6686 4 1110 627 249 10 35 chr17 68847432 68847632 -26425019 + Lx7 LINE L1 5804 5998 -1698 4 1110 3070 272 17 21 chr17 68847644 68848963 -26423688 - Lx7 LINE L1 -1018 6678 5356 4 1110 8147 206 49 62 chr17 68848969 68850412 -26422239 - Lx7 LINE L1 -1731 4149 2648 4 1110 588 29 0 0 chr17 68850412 68850482 -26422169 + (TA)n Simple_repeat Simple_repeat 2 71 0 5 1110 8147 206 49 62 chr17 68850482 68850520 -26422131 - Lx7 LINE L1 -3233 2647 2609 4 1110 2161 125 0 57 chr17 68850520 68850869 -26421782 + ORR1A4 LTR MaLR 1 329 0 5 1110 8147 206 49 62 chr17 68850869 68851890 -26420761 - Lx7 LINE L1 -3272 2608 1687 4 1110 766 65 28 0 chr17 68851890 68851997 -26420654 - L1_Mus2 LINE L1 0 6566 6457 5 1110 8147 206 49 62 chr17 68851997 68852163 -26420488 - Lx7 LINE L1 -4194 1686 1512 4 1110 1937 216 33 13 chr17 68852185 68852644 -26420007 - Lx8 LINE L1 -5 7468 7001 5 1110 37316 33 0 1 chr17 68852634 68858050 -26414601 - L1Md_T LINE L1 0 6582 1170 5 1110 5188 161 24 31 chr17 68858056 68859168 -26413483 - L1Md_T LINE L1 -5411 1205 101 5 1110 845 218 213 20 chr17 68859177 68859395 -26413256 - Lx7 LINE L1 -4360 1520 1265 4 1110 351 0 0 0 chr17 68859395 68859434 -26413217 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1110 845 283 89 22 chr17 68859434 68859630 -26413021 - Lx7 LINE L1 -6464 1264 1042 4 1110 2977 78 25 2 chr17 68859630 68860027 -26412624 + MTB_Mm LTR MaLR 2 407 0 5 1110 845 283 89 22 chr17 68860027 68860227 -26412424 - Lx7 LINE L1 -6687 1041 845 4 1110 944 320 48 12 chr17 68860968 68861840 -26410811 - L1M4c LINE L1 -530 6463 5543 5 1110 1218 83 0 0 chr17 68861840 68862008 -26410643 + (GAA)n Simple_repeat Simple_repeat 1 168 0 5 1110 659 328 32 75 chr17 68862008 68862357 -26410294 - L1M4c LINE L1 -1283 5562 5255 5 1110 2613 236 59 64 chr17 68862369 68863180 -26409471 - RLTR40 LTR ERVK -10 807 1 5 1110 1173 325 92 42 chr17 68863180 68865325 -26407326 - L1M4c LINE L1 -1592 5253 3004 5 1110 387 56 0 0 chr17 68865361 68865415 -26407236 + (TATTG)n Simple_repeat Simple_repeat 2 55 0 5 1110 478 219 291 0 chr17 68865415 68865566 -26407085 - B3 SINE B2 -21 195 1 5 1110 388 302 52 38 chr17 68865619 68865832 -26406819 - L1M4c LINE L1 -3892 2958 2743 5 1110 288 0 0 0 chr17 68865832 68865864 -26406787 + (TTCTC)n Simple_repeat Simple_repeat 5 36 0 5 1110 294 330 34 6 chr17 68865928 68866105 -26406546 - L1M4c LINE L1 -4237 2612 2431 5 1110 267 182 0 38 chr17 68867047 68867127 -26405524 + T-rich Low_complexity Low_complexity 4 80 0 5 1110 444 266 11 22 chr17 68868741 68868924 -26403727 + MER3 DNA MER1_type 1 162 -47 5 1110 332 56 56 14 chr17 68869711 68869783 -26402868 + (TTTTTG)n Simple_repeat Simple_repeat 2 76 0 5 1110 244 291 151 0 chr17 68870857 68870943 -26401708 - PB1 SINE Alu -8 119 21 5 1110 450 0 0 0 chr17 68870977 68871027 -26401624 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 1110 2773 133 7 22 chr17 68871517 68871978 -26400673 + Lx2 LINE L1 6542 6995 -2 5 1110 213 319 58 0 chr17 68873118 68873187 -26399464 - MIR SINE MIR -105 157 85 5 1110 1006 170 101 200 chr17 68873189 68873644 -26399007 - RMER17C LTR ERVK 0 410 1 5 1110 262 91 36 0 chr17 68874095 68874150 -26398501 + (TTTTG)n Simple_repeat Simple_repeat 2 58 0 5 1110 255 287 48 29 chr17 68874950 68875054 -26397597 + L2 LINE L2 409 514 -2905 5 1110 1634 315 90 49 chr17 68875536 68878067 -26394584 - L1M2 LINE L1 -10 5837 3294 5 1110 291 190 0 0 chr17 68878082 68878140 -26394511 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 1110 36547 9 0 7 chr17 68878208 68883593 -26389058 + L1Md_A LINE L1 244 5586 -297 5 1110 8874 13 0 0 chr17 68883593 68884588 -26388063 + L1Md_A LINE L1 5587 6581 -1 5 1110 491 266 32 19 chr17 68884615 68884772 -26387879 - RSINE1 SINE B4 -5 160 2 5 1110 633 344 45 26 chr17 68884772 68885655 -26386996 - L1M2 LINE L1 -2918 3225 2326 5 1110 189 107 0 0 chr17 68885719 68885747 -26386904 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 5 1110 232 204 0 0 chr17 68885786 68885835 -26386816 - L1M2 LINE L1 -3954 2189 2141 5 1110 695 322 206 18 chr17 68885908 68886625 -26386026 + L2 LINE L2 2230 3081 -338 5 1110 571 335 72 66 chr17 68887354 68887962 -26384689 - L1MEg LINE L1 -4869 1215 604 5 1110 297 279 80 9 chr17 68888321 68888473 -26384178 + MLT1D LTR MaLR 298 502 -3 5 1110 482 263 0 26 chr17 68888998 68889115 -26383536 - ORR1E LTR MaLR -13 366 253 5 1110 298 136 30 15 chr17 68889178 68889245 -26383406 + GA-rich Low_complexity Low_complexity 2 69 0 5 1110 234 0 0 0 chr17 68889254 68889280 -26383371 + (TAGA)n Simple_repeat Simple_repeat 2 27 0 5 1110 485 296 87 5 chr17 68889320 68889498 -26383153 - ORR1E LTR MaLR -184 186 4 5 1110 252 310 71 0 chr17 68889617 68889730 -26382921 - L1MA6 LINE L1 -62 6238 6118 5 1110 249 314 200 0 chr17 68889820 68889925 -26382726 - L1MA6 LINE L1 -398 5902 5777 5 1110 1283 54 0 0 chr17 68889957 68890104 -26382547 - B1_Mus2 SINE Alu 0 147 1 5 1110 542 231 158 79 chr17 68890104 68890395 -26382256 - L1MA6 LINE L1 -634 5666 5353 5 1110 6966 74 6 3 chr17 68890720 68891631 -26381020 + L1_Mus3 LINE L1 5720 6632 -6 5 1110 1947 151 14 66 chr17 68892983 68893330 -26379321 - ORR1A4 LTR MaLR 0 329 1 5 1110 359 338 58 109 chr17 68893650 68893915 -26378736 - LTR33 LTR ERVL -225 295 54 5 1110 24 32 0 0 chr17 68894542 68894573 -26378078 + AT_rich Low_complexity Low_complexity 1 31 0 5 1110 285 210 0 0 chr17 68895123 68895185 -26377466 + (TG)n Simple_repeat Simple_repeat 2 63 0 5 1110 1259 53 23 23 chr17 68895625 68895797 -26376854 - L1Md_F2 LINE L1 -1 6581 6410 5 1110 15092 75 5 7 chr17 68895797 68898716 -26373935 - L1Md_F LINE L1 -2579 3304 392 5 1110 212 0 36 0 chr17 68898980 68899008 -26373643 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 1110 419 287 0 0 chr17 68899012 68899099 -26373552 - PB1D10 SINE Alu -29 88 2 5 1110 516 290 45 6 chr17 68899291 68899468 -26373183 - HAL1-2a_MD LINE L1 -496 2528 2345 5 1110 670 214 0 9 chr17 68899503 68899740 -26372911 + (TGG)n Simple_repeat Simple_repeat 1 234 0 5 1110 563 279 165 9 chr17 68900623 68900847 -26371804 + B4A SINE B4 3 261 -31 5 1110 435 38 0 0 chr17 68900851 68900904 -26371747 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 1110 1502 163 93 3 chr17 68901281 68901570 -26371081 - IAPEY3_LTR LTR ERVK -17 315 1 5 1110 261 0 0 0 chr17 68903614 68903643 -26369008 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1110 945 77 0 8 chr17 68903643 68903774 -26368877 - B1_Mus2 SINE Alu 0 147 18 5 1110 432 104 0 0 chr17 68904141 68904208 -26368443 + (TG)n Simple_repeat Simple_repeat 2 68 0 5 1110 429 243 37 9 chr17 68904385 68904493 -26368158 - B1_Mur3 SINE Alu -8 141 31 5 1110 233 379 103 0 chr17 68904716 68904733 -26367918 - ID_B1 SINE B4 -12 212 85 5 1110 357 333 0 0 chr17 68904733 68904832 -26367819 - PB1D10 SINE Alu -15 102 4 5 1110 331 270 116 30 chr17 68905725 68906091 -26366560 - L1MEa LINE L1 -5115 1085 686 5 1110 341 274 93 9 chr17 68906726 68906833 -26365818 + B1F SINE Alu 34 149 0 5 1110 810 298 36 21 chr17 68907011 68907046 -26365605 + B4A SINE B4 4 43 -249 5 1110 210 37 0 0 chr17 68907046 68907073 -26365578 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 5 1110 810 298 36 21 chr17 68907073 68907318 -26365333 + B4A SINE B4 44 288 -4 5 1110 423 0 0 0 chr17 68907451 68907498 -26365153 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 5 1110 553 256 8 8 chr17 68907502 68907624 -26365027 - MER5A DNA MER1_type -66 123 2 5 1110 386 38 0 19 chr17 68907663 68907716 -26364935 + (CATA)n Simple_repeat Simple_repeat 1 52 0 5 1110 471 319 0 28 chr17 68907894 68908039 -26364612 - ID_B1 SINE B4 -1 223 83 5 1110 249 222 0 0 chr17 68908281 68908344 -26364307 + (TATATG)n Simple_repeat Simple_repeat 1 63 0 5 1110 283 272 12 12 chr17 68908476 68908558 -26364093 - ID2 SINE ID -1 82 1 5 1110 26 30 0 0 chr17 68909560 68909593 -26363058 + AT_rich Low_complexity Low_complexity 1 33 0 5 1110 252 282 162 87 chr17 68910203 68910432 -26362219 + RMER12 LTR ERVK 743 988 -334 5 1110 366 265 12 6 chr17 68910435 68910602 -26362049 + (TG)n Simple_repeat Simple_repeat 1 168 0 5 1110 385 289 112 62 chr17 68910608 68910884 -26361767 - B4A SINE B4 0 292 3 5 1110 28 86 0 0 chr17 68911773 68911843 -26360808 + AT_rich Low_complexity Low_complexity 1 70 0 5 1110 1881 111 33 0 chr17 68912868 68913138 -26359513 + Lx2 LINE L1 6718 6996 -1 5 1110 185 197 0 70 chr17 68913456 68913527 -26359124 + (CA)n Simple_repeat Simple_repeat 1 66 0 5 1110 260 188 0 14 chr17 68913569 68913639 -26359012 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 1110 1181 95 0 0 chr17 68914226 68914373 -26358278 + B1_Mus1 SINE Alu 2 148 0 5 1110 474 18 0 0 chr17 68914744 68914799 -26357852 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1110 869 268 51 21 chr17 68914817 68914977 -26357674 - B4 SINE B4 -48 244 85 5 1110 351 0 0 0 chr17 68914977 68915016 -26357635 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1110 869 268 51 21 chr17 68915016 68915091 -26357560 - B4 SINE B4 -208 84 3 5 1110 189 0 0 0 chr17 68916158 68916179 -26356472 + (CAG)n Simple_repeat Simple_repeat 3 23 0 5 1110 501 32 0 0 chr17 68917568 68917631 -26355020 + (TG)n Simple_repeat Simple_repeat 1 63 0 5 1110 368 251 52 21 chr17 68918062 68918167 -26354484 - PB1D7 SINE Alu -1 119 10 5 1110 240 328 0 0 chr17 68918117 68918178 -26354473 - B4A SINE B4 -148 144 84 5 1110 279 0 0 0 chr17 68920748 68920779 -26351872 + (TC)n Simple_repeat Simple_repeat 1 31 0 5 1110 234 0 0 0 chr17 68920779 68920804 -26351847 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 1110 440 133 19 0 chr17 68921595 68921700 -26350951 + (TCTA)n Simple_repeat Simple_repeat 4 110 0 5 1110 23454 90 14 9 chr17 68921703 68925851 -26346800 - L1Md_F LINE L1 -1505 4378 207 5 1110 445 248 306 37 chr17 68926026 68926298 -26346353 + L1M2 LINE L1 3592 3958 -2188 5 1110 180 0 0 0 chr17 68926298 68926318 -26346333 + (CAAA)n Simple_repeat Simple_repeat 4 23 0 5 1110 445 221 206 52 chr17 68926318 68926511 -26346140 + L1M2 LINE L1 3957 4214 -1932 5 1110 306 0 0 0 chr17 68926520 68926554 -26346097 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1110 923 82 8 0 chr17 68926557 68926691 -26345960 + (GA)n Simple_repeat Simple_repeat 1 135 0 5 1110 370 272 45 23 chr17 68926719 68926863 -26345788 + L1M2 LINE L1 4928 5078 -1068 5 1110 288 308 62 0 chr17 68926884 68927014 -26345637 - B1F2 SINE Alu -11 138 1 5 1110 333 174 28 28 chr17 68927425 68927496 -26345155 - HAL1-3A_ME LINE L1 -812 2046 1976 5 1110 474 18 0 0 chr17 68927523 68927578 -26345073 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 5 1110 227 54 0 26 chr17 68927581 68927619 -26345032 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 1110 180 0 0 0 chr17 68928906 68928926 -26343725 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1110 1242 61 0 0 chr17 68928926 68929073 -26343578 - B1_Mus2 SINE Alu 0 147 1 5 1110 190 234 77 96 chr17 68929085 68929189 -26343462 + MIRm SINE MIR 110 211 -65 5 1110 199 315 32 43 chr17 68932223 68932316 -26340335 + MIR SINE MIR 18 109 -153 5 1110 3247 55 31 5 chr17 68932513 68932899 -26339752 + MTA_Mm LTR MaLR 1 396 0 5 1110 1345 149 9 13 chr17 68932928 68933152 -26339499 - Lx2 LINE L1 0 6997 6775 5 1110 3498 119 0 6 chr17 68933147 68933653 -26338998 - Lx2 LINE L1 -349 6648 6146 5 1110 26 0 0 0 chr17 68933785 68933811 -26338840 + AT_rich Low_complexity Low_complexity 1 26 0 5 1110 1004 106 76 6 chr17 68933811 68933982 -26338669 - Lx3_Mus LINE L1 -9 7000 6818 5 1110 2279 80 87 0 chr17 68934041 68934341 -26338310 - ORR1A2 LTR MaLR -1 326 1 6 1110 555 177 0 0 chr17 68935667 68935797 -26336854 + (TG)n Simple_repeat Simple_repeat 1 130 0 6 1110 359 234 6 0 chr17 68935882 68936053 -26336598 + (TG)n Simple_repeat Simple_repeat 1 172 0 6 1110 243 0 0 0 chr17 68937226 68937253 -26335398 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 1110 326 286 15 38 chr17 68937271 68937402 -26335249 - MER3 DNA MER1_type -10 199 72 6 1110 2437 104 199 44 chr17 68937462 68937873 -26334778 - MT2C_Mm LTR ERVL 0 475 1 6 1110 255 61 0 0 chr17 68939350 68939383 -26333268 + (GAAAA)n Simple_repeat Simple_repeat 3 35 0 6 1110 553 201 226 0 chr17 68939574 68939733 -26332918 - ORR1D1 LTR MaLR -13 361 167 6 1110 223 182 0 22 chr17 68939733 68939778 -26332873 + GA-rich Low_complexity Low_complexity 2 45 0 6 1110 504 186 0 0 chr17 68939778 68939945 -26332706 + (CA)n Simple_repeat Simple_repeat 2 168 0 6 1110 494 189 0 6 chr17 68940059 68940235 -26332416 + (CAGAGA)n Simple_repeat Simple_repeat 4 178 0 6 1110 553 120 11 51 chr17 68940264 68940440 -26332211 + (CAGAGA)n Simple_repeat Simple_repeat 4 172 0 6 1110 303 115 0 19 chr17 68940443 68940496 -26332155 + HAL1-3A_ME LINE L1 1976 2027 -831 6 1110 846 198 32 16 chr17 68940522 68940707 -26331944 - ORR1D1 LTR MaLR -184 190 3 6 1110 297 0 0 0 chr17 68941752 68941785 -26330866 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 1110 405 0 0 0 chr17 68941785 68941829 -26330822 + (GA)n Simple_repeat Simple_repeat 1 45 0 6 138 904 310 113 62 chr17 68943267 68943896 -26328755 + Lx8 LINE L1 6808 7468 -5 6 1111 408 125 0 0 chr17 68943917 68943981 -26328670 + (TA)n Simple_repeat Simple_repeat 2 65 0 6 1111 312 263 139 49 chr17 68944086 68944230 -26328421 + RSINE1 SINE B4 5 161 -4 6 1111 21 36 0 0 chr17 68944251 68944279 -26328372 + AT_rich Low_complexity Low_complexity 1 28 0 6 1111 347 268 6 0 chr17 68945207 68945364 -26327287 + (TG)n Simple_repeat Simple_repeat 1 158 0 6 1111 393 285 2 2 chr17 68945412 68945846 -26326805 + (TG)n Simple_repeat Simple_repeat 1 434 0 6 1111 336 111 56 0 chr17 68945846 68945900 -26326751 - HAL1-3A_ME LINE L1 -840 2018 1962 6 1111 467 281 197 0 chr17 68946643 68946821 -26325830 - Tigger7 DNA MER2_type -1643 848 636 6 1111 477 319 21 56 chr17 68946939 68947082 -26325569 + RSINE1 SINE B4 11 148 -17 6 1111 933 174 4 11 chr17 68947158 68947435 -26325216 + GA-rich Low_complexity Low_complexity 1 274 0 6 1111 701 171 12 18 chr17 68947454 68947621 -26325030 + GA-rich Low_complexity Low_complexity 1 166 0 6 1111 1005 288 123 32 chr17 68947663 68948133 -26324518 - Tigger7 DNA MER2_type -1974 517 5 6 1111 1723 177 112 12 chr17 68949208 68949546 -26323105 - ORR1D1 LTR MaLR 0 374 3 6 1111 236 242 16 31 chr17 68950278 68950342 -26322309 + L1M5 LINE L1 5625 5687 -486 6 1111 768 289 52 112 chr17 68950349 68950750 -26321901 - MTE2b LTR MaLR -2 377 1 6 1111 259 203 94 0 chr17 68950751 68950815 -26321836 - MTE2b-int LTR MaLR -1 1579 1510 6 1111 1062 259 34 62 chr17 68950816 68951141 -26321510 + ORR1E LTR MaLR 41 356 -3 6 1111 2696 163 124 27 chr17 68951347 68951903 -26320748 - RLTR18 LTR ERVK -6 610 1 6 1111 420 20 0 0 chr17 68952064 68952113 -26320538 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1111 237 224 0 0 chr17 68954107 68954165 -26318486 + (TG)n Simple_repeat Simple_repeat 2 59 0 6 1111 829 199 7 0 chr17 68955364 68955510 -26317141 - B1_Mus1 SINE Alu -1 147 1 6 1111 208 316 25 38 chr17 68956344 68956423 -26316228 - MER5B DNA MER1_type -99 79 2 6 1111 7877 116 35 11 chr17 68957438 68958556 -26314095 - Lx2 LINE L1 0 6997 5853 6 1111 387 0 0 0 chr17 68958556 68958599 -26314052 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1111 7877 116 35 11 chr17 68958599 68958618 -26314033 - Lx2 LINE L1 -1145 5852 5834 6 1111 420 143 0 0 chr17 68958954 68959024 -26313627 + (GAAAA)n Simple_repeat Simple_repeat 2 71 0 6 1111 356 161 48 20 chr17 68959293 68959439 -26313212 + (TA)n Simple_repeat Simple_repeat 2 151 0 6 1111 315 145 33 50 chr17 68959472 68959653 -26312998 + (TA)n Simple_repeat Simple_repeat 1 178 0 6 1111 283 213 27 54 chr17 68959660 68959844 -26312807 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 6 1111 234 0 0 0 chr17 68961078 68961104 -26311547 + (TC)n Simple_repeat Simple_repeat 1 26 0 6 1111 510 67 0 0 chr17 68961104 68961178 -26311473 + (CA)n Simple_repeat Simple_repeat 1 75 0 6 1111 293 47 23 0 chr17 68961935 68961978 -26310673 + (TTG)n Simple_repeat Simple_repeat 2 45 0 6 1111 1160 76 14 0 chr17 68962009 68962154 -26310497 - B1_Mus1 SINE Alu 0 148 2 6 1111 966 231 68 18 chr17 68962171 68962391 -26310260 - Lx5 LINE L1 -12 7038 6808 6 1111 1033 200 213 0 chr17 68962394 68962629 -26310022 + Lx5 LINE L1 6523 6807 -243 6 1111 231 283 78 26 chr17 68962936 68963052 -26309599 - L1MB8 LINE L1 -9 6169 6048 6 1111 730 194 12 20 chr17 68963188 68963438 -26309213 + G-rich Low_complexity Low_complexity 1 248 0 6 1111 1133 79 21 0 chr17 68963668 68963808 -26308843 - B1_Mus2 SINE Alu 0 147 5 6 1111 205 306 13 89 chr17 68966338 68966417 -26306234 + L2b LINE L2 3269 3341 -34 6 1111 183 250 0 0 chr17 68966968 68967008 -26305643 - MIRm SINE MIR -21 255 216 6 1111 205 357 50 10 chr17 68967094 68967193 -26305458 + MIR SINE MIR 40 142 -120 6 1111 761 211 0 0 chr17 68967229 68967362 -26305289 - B1F SINE Alu -6 143 11 6 1111 624 294 4 127 chr17 68967362 68967468 -26305183 - ID_B1 SINE B4 0 214 10 6 1111 1401 211 0 74 chr17 68967468 68967805 -26304846 + Lx7 LINE L1 7384 7695 -1 6 1111 227 340 46 31 chr17 68968410 68968604 -26304047 - L1MA9 LINE L1 -149 6163 5967 6 1111 1576 250 8 25 chr17 68970321 68970682 -26301969 - MTD LTR MaLR -14 405 51 6 1111 3329 114 4 7 chr17 68970803 68971559 -26301092 - L1VL4 LINE L1 -2404 1413 654 6 1111 526 273 19 62 chr17 68971563 68971723 -26300928 + RMER17B LTR ERVK 11 163 -795 6 1111 2030 115 3 26 chr17 68972267 68972570 -26300081 - Lx3A LINE L1 -4 6977 6682 6 1111 462 65 0 0 chr17 68972630 68972692 -26299959 + (TC)n Simple_repeat Simple_repeat 1 62 0 6 1111 1772 196 58 32 chr17 68975491 68975891 -26296760 - MTD LTR MaLR -9 410 1 6 1111 206 95 0 23 chr17 68975986 68976029 -26296622 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 6 1111 23 68 0 0 chr17 68977128 68977172 -26295479 + AT_rich Low_complexity Low_complexity 1 44 0 6 1111 312 284 0 0 chr17 68977695 68977762 -26294889 + (CA)n Simple_repeat Simple_repeat 2 68 0 6 1111 3438 55 0 5 chr17 68977769 68978171 -26294480 + MTB LTR MaLR 1 400 0 6 1111 224 282 20 13 chr17 68978481 68978632 -26294019 + (TATATG)n Simple_repeat Simple_repeat 6 157 0 6 1111 369 113 0 0 chr17 68978633 68978686 -26293965 - HAL1-3A_ME LINE L1 -840 2018 1966 6 1111 723 104 0 0 chr17 68980600 68980706 -26291945 + (TA)n Simple_repeat Simple_repeat 2 107 0 6 1111 306 182 0 0 chr17 68982015 68982081 -26290570 + (CA)n Simple_repeat Simple_repeat 1 66 0 6 1111 402 21 0 0 chr17 68982132 68982179 -26290472 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 6 1111 226 181 130 65 chr17 68983061 68983138 -26289513 - MLT1H LTR MaLR -314 235 154 6 1111 21 82 0 0 chr17 68983209 68983258 -26289393 + AT_rich Low_complexity Low_complexity 1 49 0 6 1111 191 357 110 20 chr17 68984134 68984234 -26288417 + L2a LINE L2 3299 3407 -19 6 1111 1020 222 13 62 chr17 68986114 68986340 -26286311 + B3 SINE B2 2 216 0 6 1111 689 312 34 44 chr17 68986601 68986896 -26285755 + B4A SINE B4 1 292 0 6 1111 753 213 0 0 chr17 68987426 68987600 -26285051 + (CA)n Simple_repeat Simple_repeat 1 174 0 6 1111 296 161 16 0 chr17 68987619 68987681 -26284970 + GA-rich Low_complexity Low_complexity 2 64 0 6 1111 419 298 9 0 chr17 68988859 68988973 -26283678 + MIRb SINE MIR 84 198 -70 6 1111 203 0 37 0 chr17 68990911 68990938 -26281713 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 6 1111 537 158 0 0 chr17 68992316 68992417 -26280234 + CT-rich Low_complexity Low_complexity 2 102 0 6 1111 366 342 98 57 chr17 68994193 68994562 -26278089 - L1M5 LINE L1 -1096 5050 4667 6 1111 229 170 19 19 chr17 68994739 68994793 -26277858 - L1MD LINE L1 -1610 4536 4483 6 1111 261 288 0 27 chr17 68994813 68994888 -26277763 - L1M5 LINE L1 -2000 4146 4074 6 1111 247 225 0 0 chr17 68994913 68994984 -26277667 - Lx5 LINE L1 -11 7039 6969 6 1111 1297 202 0 4 chr17 68995035 68995264 -26277387 + ORR1A1 LTR MaLR 3 230 -116 6 1111 8492 34 11 0 chr17 68995271 68996797 -26275854 - L1Md_F2 LINE L1 0 6582 5041 6 1111 827 122 22 58 chr17 68996797 68996936 -26275715 + ORR1A1 LTR MaLR 193 326 0 6 1111 415 228 54 14 chr17 68996973 68997120 -26275531 - L1M5 LINE L1 -2132 4014 3862 6 1111 422 283 0 28 chr17 68997280 68997389 -26275262 + Tigger6a DNA MER2_type 2 107 -976 6 1111 321 304 67 42 chr17 68997499 68997664 -26274987 + Tigger6a DNA MER2_type 283 451 -632 6 1111 393 324 28 50 chr17 68997784 68997963 -26274688 + Tigger6a DNA MER2_type 908 1082 -1 6 1111 362 319 52 44 chr17 68997963 68998257 -26274394 - L1M5 LINE L1 -2398 3748 3458 6 1111 1467 316 38 31 chr17 68998387 68998909 -26273742 + Lx8 LINE L1 6506 7031 -442 6 1111 257 329 35 0 chr17 68998913 68998998 -26273653 - B4 SINE B4 -197 95 8 6 1111 1731 181 71 18 chr17 68999097 68999434 -26273217 - ORR1B1 LTR MaLR 0 394 40 6 1111 475 267 131 37 chr17 68999444 68999689 -26272962 - B4A SINE B4 -20 272 5 6 1111 491 45 15 0 chr17 68999934 69000000 -26272651 + (TC)n Simple_repeat Simple_repeat 2 68 0 6 1111 509 15 31 0 chr17 69000000 69000065 -26272586 + (TCTCCC)n Simple_repeat Simple_repeat 3 69 0 1 1111 237 246 0 0 chr17 69000067 69000128 -26272523 + A-rich Low_complexity Low_complexity 1 61 0 2 1111 708 293 61 13 chr17 69000294 69000522 -26272129 + Lx7 LINE L1 6931 7169 -527 3 1111 198 0 0 0 chr17 69000693 69000715 -26271936 + (T)n Simple_repeat Simple_repeat 1 22 0 4 1111 1143 57 49 14 chr17 69000715 69000857 -26271794 - B1_Mm SINE Alu 0 147 1 5 1111 225 108 0 0 chr17 69000886 69000923 -26271728 + (TA)n Simple_repeat Simple_repeat 1 37 0 6 1111 1876 301 148 31 chr17 69000944 69001488 -26271163 - Lx9 LINE L1 -198 7446 6811 7 1111 441 0 0 0 chr17 69001488 69001537 -26271114 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 8 1111 1876 269 91 57 chr17 69001537 69003071 -26269580 - Lx9 LINE L1 -834 6810 5016 7 1111 351 0 0 0 chr17 69003265 69003304 -26269347 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 1111 188 86 0 28 chr17 69003340 69003376 -26269275 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 1 1111 360 0 0 0 chr17 69003478 69003518 -26269133 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1111 1814 299 116 75 chr17 69003633 69005721 -26266930 + L1M2 LINE L1 2477 4676 -1467 1 1111 748 282 32 50 chr17 69005721 69005941 -26266710 - B3 SINE B2 0 216 1 1 1111 1814 299 116 75 chr17 69005941 69006225 -26266426 + L1M2 LINE L1 4677 4946 -1197 1 1111 392 341 92 13 chr17 69006306 69006374 -26266277 + L1M2 LINE L1 4907 4978 -1165 1 1111 423 0 0 0 chr17 69006374 69006421 -26266230 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 1 1111 480 309 291 35 chr17 69006421 69006824 -26265827 + L1M2 LINE L1 4979 5485 -815 1 1111 744 252 73 78 chr17 69006829 69007061 -26265590 - RLTR18 LTR ERVK -281 231 1 1 1111 1057 127 0 6 chr17 69008030 69008197 -26264454 + Lx LINE L1 6488 6653 -1 1 1111 486 229 0 0 chr17 69008308 69008430 -26264221 + (TG)n Simple_repeat Simple_repeat 2 123 0 1 1111 255 284 125 19 chr17 69008617 69008721 -26263930 - ORR1E LTR MaLR -225 134 20 1 1111 530 295 141 29 chr17 69008736 69009668 -26262983 + L1MC2 LINE L1 495 1626 -5125 1 1111 1559 294 17 22 chr17 69009868 69010493 -26262158 - Lx8 LINE L1 -1640 6004 5358 2 1111 246 242 66 0 chr17 69010881 69010972 -26261679 + L1MC2 LINE L1 2390 2486 -4265 1 1111 263 248 83 33 chr17 69011000 69011121 -26261530 + L1MC2 LINE L1 5411 5537 -1027 1 1111 450 0 0 0 chr17 69011156 69011206 -26261445 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1111 1465 292 82 53 chr17 69011280 69011673 -26260978 + L1MC2 LINE L1 5734 6137 -625 1 1111 2695 50 0 6 chr17 69011673 69011993 -26260658 + L1Md_F2 LINE L1 6252 6569 -13 2 1111 1465 292 82 53 chr17 69011993 69012493 -26260158 + L1MC2 LINE L1 6138 6653 -109 1 1111 516 184 10 0 chr17 69013214 69013312 -26259339 + RMER6A LTR ERVK 3 101 -360 2 1111 237 291 50 76 chr17 69013324 69013562 -26259089 - RLTR15 LTR ERVK -9 350 119 2 1111 3736 150 17 18 chr17 69013749 69014413 -26258238 + RMER6A LTR ERVK 94 756 0 2 1111 2071 145 3 27 chr17 69016346 69016721 -26255930 - RLTR11B LTR ERVK 0 453 88 2 1111 7011 35 0 0 chr17 69017559 69018335 -26254316 + L1Md_T LINE L1 5807 6582 0 2 1111 1155 82 0 0 chr17 69018356 69018491 -26254160 + B1_Mus1 SINE Alu 1 135 -13 2 1111 402 57 0 0 chr17 69018492 69018545 -26254106 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 1111 544 234 233 7 chr17 69018673 69018819 -26253832 + B3A SINE B2 1 179 -19 2 1111 332 267 11 28 chr17 69018896 69019077 -26253574 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 3 1111 379 198 9 28 chr17 69019105 69019214 -26253437 + (CA)n Simple_repeat Simple_repeat 2 108 0 3 1111 819 31 0 0 chr17 69019779 69019877 -26252774 + (CA)n Simple_repeat Simple_repeat 1 98 0 3 1111 1092 148 6 6 chr17 69022287 69022470 -26250181 + L1VL1 LINE L1 84 266 -6156 3 1111 746 226 7 0 chr17 69022470 69022625 -26250026 + L1Md_F LINE L1 383 538 -5981 3 1111 4655 64 7 5 chr17 69022626 69023192 -26249459 + L1Md_F2 LINE L1 6003 6569 -13 3 1111 228 135 0 0 chr17 69024054 69024091 -26248560 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 1111 1348 276 44 26 chr17 69024092 69024546 -26248105 - Lx9 LINE L1 -127 7517 7056 3 1111 240 226 0 0 chr17 69024541 69024594 -26248057 - Lx9 LINE L1 -755 6889 6837 3 1111 720 211 18 87 chr17 69024588 69024739 -26247912 - L1_Rod LINE L1 -757 5090 4946 3 1111 3144 86 46 5 chr17 69024739 69025171 -26247480 + L1_Mus3 LINE L1 6189 6638 0 3 1111 720 211 18 87 chr17 69025171 69025237 -26247414 - L1_Rod LINE L1 -902 4945 4888 3 1111 269 333 49 0 chr17 69025253 69025310 -26247341 + PB1D7 SINE Alu 2 59 -61 4 1111 351 0 0 0 chr17 69025310 69025349 -26247302 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1111 269 333 49 0 chr17 69025349 69025393 -26247258 + PB1D7 SINE Alu 60 107 -13 4 1111 22 0 0 0 chr17 69026273 69026295 -26246356 + AT_rich Low_complexity Low_complexity 1 22 0 4 1111 291 21 0 59 chr17 69027689 69027740 -26244911 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 4 1111 948 246 92 92 chr17 69028165 69028504 -26244147 + ORR1D2 LTR MaLR 18 367 -3 4 1111 285 330 0 26 chr17 69029193 69029308 -26243343 + (TG)n Simple_repeat Simple_repeat 1 112 0 4 1111 285 256 76 17 chr17 69029309 69029428 -26243223 - Tigger7 DNA MER2_type -90 2401 2276 4 1111 21 0 0 0 chr17 69029428 69029449 -26243202 + AT_rich Low_complexity Low_complexity 1 21 0 4 1111 497 303 98 12 chr17 69029474 69029718 -26242933 - Tigger7 DNA MER2_type -1395 1096 832 4 1111 669 297 98 27 chr17 69029699 69029955 -26242696 - Tigger7 DNA MER2_type -1823 668 395 4 1111 294 315 88 84 chr17 69029973 69030247 -26242404 - ORR1E LTR MaLR -67 292 18 4 1111 495 258 150 13 chr17 69030269 69030422 -26242229 - Tigger7 DNA MER2_type -2074 417 244 4 1111 440 341 46 53 chr17 69030781 69031044 -26241607 + B4A SINE B4 32 292 0 4 1111 475 358 47 16 chr17 69031161 69031351 -26241300 - Tigger7 DNA MER2_type -2251 240 45 4 1111 450 0 0 0 chr17 69032235 69032285 -26240366 + (TTA)n Simple_repeat Simple_repeat 2 51 0 5 1111 314 191 114 122 chr17 69032566 69032612 -26240039 - MTC LTR MaLR -14 405 364 5 1111 1137 75 8 0 chr17 69032612 69032746 -26239905 + B1_Mus1 SINE Alu 1 135 -13 5 1111 270 0 0 0 chr17 69032748 69032778 -26239873 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 5 1111 838 253 51 122 chr17 69032778 69033127 -26239524 - MTC LTR MaLR -52 369 57 5 1111 238 257 218 0 chr17 69033435 69033536 -26239115 - B1F2 SINE Alu -6 143 21 5 1111 249 146 0 0 chr17 69033625 69033673 -26238978 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 1111 354 270 10 0 chr17 69033673 69033773 -26238878 + (CA)n Simple_repeat Simple_repeat 2 102 0 5 1111 192 361 0 0 chr17 69034786 69034847 -26237804 + MIR SINE MIR 55 115 -93 5 1111 516 286 139 47 chr17 69035358 69035821 -26236830 + L1MA4 LINE L1 5486 5993 -298 5 1111 255 108 45 15 chr17 69036669 69036735 -26235916 + (TTTA)n Simple_repeat Simple_repeat 2 69 0 5 1111 25708 54 1 1 chr17 69036747 69040622 -26232029 - L1Md_F2 LINE L1 0 6582 2712 6 1111 24774 61 1 22 chr17 69040618 69044725 -26227926 - L1Md_F LINE L1 -1643 4240 224 6 1111 1186 88 0 0 chr17 69044727 69044874 -26227777 - B1_Mus1 SINE Alu 0 148 2 6 1111 677 279 31 72 chr17 69045902 69046195 -26226456 - Lx8 LINE L1 -69 7404 7124 6 1111 198 0 0 0 chr17 69046262 69046284 -26226367 + (TG)n Simple_repeat Simple_repeat 1 22 0 6 1111 926 206 11 56 chr17 69046292 69046472 -26226179 - B3A SINE B2 -26 172 1 6 1111 5026 53 5 5 chr17 69046894 69047484 -26225167 - L1_Mus1 LINE L1 0 6567 5978 6 1111 25 51 0 0 chr17 69048704 69048743 -26223908 + AT_rich Low_complexity Low_complexity 1 39 0 6 1111 606 153 0 0 chr17 69048782 69048893 -26223758 + (TA)n Simple_repeat Simple_repeat 1 111 0 6 1111 1527 99 9 0 chr17 69048902 69049113 -26223538 - L1_Mus3 LINE L1 -6 6632 6420 6 1111 252 200 0 0 chr17 69049181 69049246 -26223405 + GA-rich Low_complexity Low_complexity 3 67 0 7 1111 221 315 0 0 chr17 69049263 69049352 -26223299 + (ATG)n Simple_repeat Simple_repeat 3 91 0 7 1111 1784 169 61 42 chr17 69049942 69050301 -26222350 + ORR1B1 LTR MaLR 29 394 0 7 1111 1129 194 175 0 chr17 69050301 69050569 -26222082 + ORR1B1-int LTR MaLR 1 315 -1648 7 1111 4160 44 19 0 chr17 69050569 69051050 -26221601 - L1Md_F3 LINE L1 -1 6583 6094 7 1111 6886 41 1 0 chr17 69051051 69052084 -26220567 + L1Md_F3 LINE L1 5048 6081 -503 7 1111 3830 174 32 6 chr17 69052084 69052807 -26219844 + ORR1B1-int LTR MaLR 305 1046 -917 7 1111 1084 265 80 66 chr17 69052979 69053342 -26219309 - ORR1D2 LTR MaLR -2 368 1 7 1111 375 237 93 93 chr17 69056218 69056390 -26216261 - RLTR13D3 LTR ERVK 0 1114 943 7 1111 217 162 0 0 chr17 69056647 69056684 -26215967 - B2_Mm2 SINE B2 -157 38 2 7 1111 432 321 62 62 chr17 69058026 69058458 -26214193 + Lx9 LINE L1 7191 7622 -22 7 1111 328 226 22 22 chr17 69058480 69058616 -26214035 + GA-rich Low_complexity Low_complexity 2 137 0 7 1111 2149 111 12 58 chr17 69061006 69061351 -26211300 - ORR1A4 LTR MaLR 0 329 1 7 1111 271 60 0 39 chr17 69061514 69061566 -26211085 + (TTTTG)n Simple_repeat Simple_repeat 4 53 0 8 1111 21 0 0 0 chr17 69061610 69061631 -26211020 + AT_rich Low_complexity Low_complexity 1 21 0 8 1111 698 317 75 16 chr17 69062417 69062722 -26209929 + Tigger7 DNA MER2_type 6 328 -2163 8 1111 555 16 0 0 chr17 69062905 69062969 -26209682 + (TA)n Simple_repeat Simple_repeat 2 65 0 8 1111 1261 124 0 6 chr17 69064124 69064302 -26208349 - B2_Mm2 SINE B2 -18 177 1 8 1111 1103 93 0 6 chr17 69065373 69065536 -26207115 + (GAGAA)n Simple_repeat Simple_repeat 2 163 0 8 1111 4709 198 86 9 chr17 69066241 69066253 -26206398 - Lx9 LINE L1 -21 7623 7610 8 1111 3457 32 7 0 chr17 69066253 69066656 -26205995 - L1Md_F2 LINE L1 -3 6579 6174 8 1111 4709 198 86 9 chr17 69066656 69066776 -26205875 - Lx9 LINE L1 -35 7609 7491 8 1111 2513 92 3 0 chr17 69066776 69067102 -26205549 + ORR1A2 LTR MaLR 1 327 0 8 1111 4709 198 86 9 chr17 69067102 69068027 -26204624 - Lx9 LINE L1 -154 7490 6485 8 1111 346 217 0 0 chr17 69068059 69068119 -26204532 - Lx9 LINE L1 -1137 6507 6448 8 1111 330 275 45 18 chr17 69070871 69070982 -26201669 + PB1D10 SINE Alu 2 115 -2 8 1111 1192 68 0 0 chr17 69071104 69071251 -26201400 - B1_Mus1 SINE Alu 0 148 2 9 1111 2876 38 0 0 chr17 69071372 69071743 -26200908 - L1_Mus1 LINE L1 0 6567 6219 9 1111 2079 29 4 0 chr17 69071807 69072051 -26200600 - L1Md_F2 LINE L1 -572 6010 5766 9 1111 1777 22 17 30 chr17 69072051 69072283 -26200368 + L1Md_F3 LINE L1 6355 6583 -1 9 1111 3991 279 69 17 chr17 69072832 69074333 -26198318 - L1_Mur3 LINE L1 -966 4914 3337 9 1111 573 335 19 0 chr17 69074469 69074678 -26197973 - Lx8 LINE L1 -132 7341 7129 9 138 460 255 54 34 chr17 69074679 69074962 -26197689 - L1_Mur3 LINE L1 -2556 3324 3023 9 1112 1491 328 80 10 chr17 69074996 69075841 -26196810 + L1MB7 LINE L1 5040 5965 -219 9 1112 1267 96 61 2 chr17 69075852 69076042 -26196609 - Lx2A1 LINE L1 -361 5801 5587 9 1112 2041 144 23 6 chr17 69076042 69076385 -26196266 + Lx2 LINE L1 6648 6996 -1 9 1112 629 244 89 19 chr17 69076385 69076407 -26196244 - Lx2A1 LINE L1 -564 5598 5575 9 1112 2473 302 64 57 chr17 69076407 69077443 -26195208 + Lx8 LINE L1 6252 7294 -179 9 1112 249 337 0 33 chr17 69077445 69077537 -26195114 + PB1D10 SINE Alu 16 104 -13 1 1112 323 292 71 0 chr17 69077852 69077965 -26194686 - L1MC LINE L1 -2097 5785 5665 1 1112 299 323 135 23 chr17 69078273 69078533 -26194118 - Lx8 LINE L1 -1 7472 7184 1 1112 2388 146 11 30 chr17 69078533 69078972 -26193679 - RMER6B LTR ERVK 0 461 31 1 1112 4412 52 0 6 chr17 69078973 69079514 -26193137 + L1Md_F2 LINE L1 6036 6573 -9 1 1112 1124 299 107 15 chr17 69079568 69080037 -26192614 - Lx8 LINE L1 -340 7133 6622 1 1112 1624 173 94 15 chr17 69080044 69080385 -26192266 + MTB_Mm LTR MaLR 1 368 -39 1 1112 409 287 44 7 chr17 69080410 69080547 -26192104 - L1M7 LINE L1 -4616 1602 1461 1 1112 747 171 17 11 chr17 69080705 69080882 -26191769 + (TATG)n Simple_repeat Simple_repeat 3 180 0 1 1112 611 179 31 6 chr17 69080912 69081075 -26191576 + (TATG)n Simple_repeat Simple_repeat 4 170 0 1 1112 395 271 124 10 chr17 69081081 69081275 -26191376 - L1MB3 LINE L1 -223 6196 5981 1 1112 252 214 42 14 chr17 69081284 69081355 -26191296 - L1MB3 LINE L1 -1899 4477 4405 1 1112 457 149 46 9 chr17 69081452 69081560 -26191091 - Lx9 LINE L1 -1 7643 7532 1 1112 315 266 32 0 chr17 69081729 69081823 -26190828 - L1MB3 LINE L1 -2647 3729 3633 1 1112 288 234 124 31 chr17 69081842 69081939 -26190712 + Lx9 LINE L1 7349 7454 -190 1 1112 553 204 40 0 chr17 69081941 69082093 -26190558 + Lx9 LINE L1 7481 7638 -6 1 1112 530 279 163 49 chr17 69082188 69082352 -26190299 - L1MB3 LINE L1 -2800 3582 3401 1 1112 1148 211 5 0 chr17 69082352 69082575 -26190076 - URR1A DNA MER1_type -2 224 1 1 1112 530 279 163 49 chr17 69082575 69082602 -26190049 - L1MB3 LINE L1 -2982 3400 3389 1 1112 216 0 0 0 chr17 69082602 69082626 -26190025 + (TC)n Simple_repeat Simple_repeat 1 24 0 1 1112 530 279 163 49 chr17 69082626 69083335 -26189316 - L1MB3 LINE L1 -2994 3388 2578 1 1112 1872 174 39 22 chr17 69083340 69083746 -26188905 - MTC LTR MaLR -8 413 1 1 1112 249 238 116 20 chr17 69083750 69083896 -26188755 - L1MB3 LINE L1 -3810 2572 2413 1 1112 449 249 11 11 chr17 69083924 69084103 -26188548 + (TG)n Simple_repeat Simple_repeat 2 180 0 1 1112 214 304 54 11 chr17 69084198 69084291 -26188360 - PB1D10 SINE Alu 0 117 21 1 1112 906 281 190 17 chr17 69084302 69084956 -26187695 - L1MB3 LINE L1 -3951 2433 1667 1 1112 480 59 0 0 chr17 69085138 69085206 -26187445 + (TC)n Simple_repeat Simple_repeat 2 69 0 1 1112 243 61 0 0 chr17 69085207 69085240 -26187411 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 1 1112 1408 258 147 45 chr17 69085277 69085830 -26186821 - Lx7 LINE L1 -335 7361 6753 1 1112 449 281 61 20 chr17 69086572 69086768 -26185883 + MER92B LTR ERV1 13 216 -420 1 1112 192 135 0 0 chr17 69086805 69086842 -26185809 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 1 1112 3114 64 13 2 chr17 69087280 69087673 -26184978 - MTB LTR MaLR 0 400 4 1 1112 725 140 163 21 chr17 69087877 69088067 -26184584 - Lx9 LINE L1 -2 7642 7426 1 1112 444 249 55 30 chr17 69088534 69088700 -26183951 + L1MA6 LINE L1 6121 6289 -23 1 1112 223 303 30 0 chr17 69090674 69090740 -26181911 + MIRb SINE MIR 61 128 -140 1 1112 272 209 12 0 chr17 69091303 69091389 -26181262 + (TG)n Simple_repeat Simple_repeat 2 88 0 1 1112 207 0 0 0 chr17 69091754 69091777 -26180874 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1112 227 328 15 0 chr17 69093255 69093322 -26179329 - ORR1D1 LTR MaLR -1 373 306 1 1112 741 238 144 27 chr17 69093438 69093701 -26178950 - ORR1D1 LTR MaLR -80 294 1 1 1112 2851 49 3 0 chr17 69094236 69094580 -26178071 - IAPLTR4 LTR ERVK 0 345 1 1 1112 269 51 26 0 chr17 69103894 69103933 -26168718 + (CCCCCA)n Simple_repeat Simple_repeat 2 41 0 1 1112 4064 90 42 38 chr17 69104916 69105515 -26167136 + MT2B LTR ERVL 1 601 0 1 1112 985 204 79 21 chr17 69106021 69106261 -26166390 - Lx5 LINE L1 -5 7045 6792 1 1112 1982 119 9 3 chr17 69106261 69106580 -26166071 + ORR1A4 LTR MaLR 1 321 -8 1 1112 5599 176 54 17 chr17 69106580 69107612 -26165039 - Lx5 LINE L1 -250 6800 5731 1 1112 207 0 0 0 chr17 69108690 69108713 -26163938 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1 1112 470 55 68 126 chr17 69111083 69111186 -26161465 + L1_Mus1 LINE L1 6471 6567 0 1 1112 252 279 13 0 chr17 69112470 69112587 -26160064 + (TG)n Simple_repeat Simple_repeat 1 118 0 1 1112 725 292 121 0 chr17 69112614 69112871 -26159780 - B4 SINE B4 0 292 5 1 1112 236 197 129 57 chr17 69112969 69113039 -26159612 - B1F SINE Alu 0 149 75 1 1112 202 260 0 105 chr17 69115470 69115515 -26157136 - MIRm SINE MIR -112 164 122 1 1112 3187 0 5 47 chr17 69115515 69115898 -26156753 - IAPLTR1_Mm LTR ERVK 0 367 1 1 1112 202 260 0 105 chr17 69115898 69115938 -26156713 - MIRm SINE MIR -155 121 88 1 1112 443 187 0 9 chr17 69118362 69118453 -26154198 + (TGAA)n Simple_repeat Simple_repeat 2 92 0 1 1112 1131 117 0 0 chr17 69118453 69118633 -26154018 + (TGAG)n Simple_repeat Simple_repeat 1 180 0 1 1112 443 187 0 9 chr17 69118633 69118649 -26154002 + (TGAA)n Simple_repeat Simple_repeat 1 16 0 1 1112 455 324 32 32 chr17 69120399 69120584 -26152067 + MER20 DNA MER1_type 32 216 -3 1 1112 606 109 0 0 chr17 69121569 69121661 -26150990 + (TCTA)n Simple_repeat Simple_repeat 1 92 0 1 1112 414 0 0 0 chr17 69122479 69122525 -26150126 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1112 243 352 64 18 chr17 69122582 69122692 -26149959 + MIRb SINE MIR 27 141 -127 1 1112 3073 81 68 16 chr17 69122769 69123208 -26149443 + Lx3_Mus LINE L1 6548 7009 0 1 1112 315 104 0 0 chr17 69125169 69125217 -26147434 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1112 1953 132 78 7 chr17 69125238 69125544 -26147107 - Lx LINE L1 -2 7056 6729 1 1112 189 121 0 0 chr17 69126355 69126388 -26146263 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1112 339 256 0 24 chr17 69126461 69126545 -26146106 - RSINE1 SINE B4 -81 84 3 1 1112 3031 175 41 21 chr17 69128293 69128875 -26143776 - Lx LINE L1 0 6654 6061 1 1112 27 0 0 0 chr17 69129384 69129411 -26143240 + AT_rich Low_complexity Low_complexity 1 27 0 1 1112 244 304 54 11 chr17 69133302 69133395 -26139256 - PB1D9 SINE Alu -9 111 15 1 1112 360 0 0 0 chr17 69133555 69133595 -26139056 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1112 777 247 28 68 chr17 69133595 69133847 -26138804 - B4A SINE B4 -27 265 24 1 1112 8238 69 7 23 chr17 69134907 69136055 -26136596 - Lx3_Mus LINE L1 0 7009 5880 1 1112 30 0 0 0 chr17 69136087 69136117 -26136534 + AT_rich Low_complexity Low_complexity 1 30 0 1 1112 808 266 100 54 chr17 69136141 69136510 -26136141 + L1MA4 LINE L1 5542 5927 -373 1 1112 7800 61 8 14 chr17 69136600 69137694 -26134957 + L1_Mus2 LINE L1 5476 6566 0 1 1112 287 179 53 0 chr17 69138158 69138253 -26134398 + (CATATA)n Simple_repeat Simple_repeat 6 105 0 1 1112 410 321 52 0 chr17 69139266 69139400 -26133251 - B1F2 SINE Alu -7 142 2 1 1112 3047 44 28 15 chr17 69139544 69139933 -26132718 - MTA_Mm LTR MaLR -2 394 1 1 1112 234 272 20 144 chr17 69140374 69140491 -26132160 + MT2B LTR ERVL 179 283 -318 1 1112 621 40 0 0 chr17 69140491 69140567 -26132084 + (GGA)n Simple_repeat Simple_repeat 3 78 0 1 1112 234 272 20 144 chr17 69140567 69140595 -26132056 + MT2B LTR ERVL 284 306 -295 1 1112 243 301 0 31 chr17 69140590 69140686 -26131965 - MLT1A1 LTR MaLR -13 395 303 1 1112 501 254 108 52 chr17 69141049 69141261 -26131390 + MTD LTR MaLR 182 405 -14 1 1112 488 310 42 27 chr17 69141297 69141325 -26131326 - L1MA4 LINE L1 -1552 5921 5888 1 1112 393 117 0 0 chr17 69141325 69141385 -26131266 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 1112 598 282 172 25 chr17 69141385 69141793 -26130858 - L1MA4 LINE L1 -383 5917 5388 1 1112 24 32 0 0 chr17 69144023 69144054 -26128597 + AT_rich Low_complexity Low_complexity 1 31 0 1 1112 1313 99 16 16 chr17 69144116 69144310 -26128341 + B2_Mm2 SINE B2 2 195 0 1 1112 267 163 41 0 chr17 69144372 69144421 -26128230 - L1_Mm LINE L1 -253 5630 5580 1 1112 8154 31 20 0 chr17 69144421 69145377 -26127274 + L1Md_F3 LINE L1 5610 6584 0 1 1112 181 303 22 33 chr17 69145582 69145674 -26126977 - MIRc SINE MIR -88 180 90 1 1112 441 295 18 99 chr17 69146698 69147086 -26125565 + MTEb LTR MaLR 4 379 0 1 1112 241 341 27 100 chr17 69148405 69148555 -26124096 - MER63B DNA AcHobo -17 419 281 1 1112 453 222 12 6 chr17 69148674 69148846 -26123805 + (TG)n Simple_repeat Simple_repeat 2 174 0 1 1112 244 258 0 0 chr17 69148857 69148923 -26123728 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 1112 225 323 132 58 chr17 69149366 69149609 -26123042 - MLT1A LTR MaLR -2 372 112 1 1112 417 66 0 0 chr17 69149857 69149918 -26122733 + (CATA)n Simple_repeat Simple_repeat 2 62 0 1 1112 2685 283 46 21 chr17 69150636 69151447 -26121204 - Lx7 LINE L1 -329 7367 6537 1 1112 401 307 39 20 chr17 69151621 69151774 -26120877 - RSINE1 SINE B4 -2 163 8 1 1112 1806 168 14 17 chr17 69153033 69153390 -26119261 - ORR1B2 LTR MaLR -7 360 5 1 1112 472 294 94 10 chr17 69153969 69154172 -26118479 - CR1_Mam LINE CR1 -522 1682 1463 1 1112 233 274 56 56 chr17 69154184 69154273 -26118378 - CR1_Mam LINE CR1 -786 1418 1330 1 1112 29 22 0 21 chr17 69154901 69154917 -26117734 + AT_rich Low_complexity Low_complexity 1 16 0 1 1112 333 0 0 0 chr17 69154917 69154954 -26117697 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1112 29 22 0 21 chr17 69154954 69154984 -26117667 + AT_rich Low_complexity Low_complexity 1 30 0 1 1112 654 25 0 0 chr17 69155008 69155088 -26117563 + (TAGA)n Simple_repeat Simple_repeat 2 81 0 1 1112 468 0 0 0 chr17 69155179 69155231 -26117420 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 1112 1913 256 77 20 chr17 69156516 69157113 -26115538 + Lx9 LINE L1 6567 7197 -447 1 1112 4558 250 61 22 chr17 69157115 69157221 -26115430 - Lx7 LINE L1 -282 7414 7293 1 1112 189 0 0 0 chr17 69157221 69157242 -26115409 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1 1112 4558 250 61 22 chr17 69157242 69158336 -26114315 - Lx7 LINE L1 -404 7292 6169 1 1112 265 294 128 0 chr17 69160217 69160326 -26112325 - MLT1A0 LTR MaLR -27 338 216 1 1112 1275 53 14 34 chr17 69160326 69160831 -26111820 + (TC)n Simple_repeat Simple_repeat 1 494 0 1 1112 373 250 80 43 chr17 69160835 69160973 -26111678 - MLT1A0 LTR MaLR -218 147 5 1 1112 278 318 67 34 chr17 69161148 69161327 -26111324 - L2 LINE L2 -578 2841 2657 1 1112 1375 233 105 42 chr17 69161453 69161928 -26110723 + Lx7 LINE L1 142 646 -7082 1 1112 2511 254 16 91 chr17 69161926 69162743 -26109908 + Lx7 LINE L1 6612 7367 -329 1 1112 1295 194 63 52 chr17 69162761 69163126 -26109525 + Lx7 LINE L1 7328 7696 0 1 1112 360 339 88 21 chr17 69163126 69163364 -26109287 + MER2 DNA MER2_type 58 311 -34 1 1112 227 338 12 0 chr17 69163834 69163914 -26108737 + ID4 SINE ID 2 82 -1 1 1112 311 315 48 18 chr17 69164431 69164596 -26108055 - Tigger15a DNA TcMar -81 634 465 1 1112 357 263 0 92 chr17 69164819 69164949 -26107702 + G-rich Low_complexity Low_complexity 2 119 0 1 1112 200 151 96 48 chr17 69165081 69165248 -26107403 + (CATA)n Simple_repeat Simple_repeat 3 177 0 2 1112 303 361 50 6 chr17 69165849 69166008 -26106643 - MER5A1 DNA MER1_type 0 166 1 2 1112 501 17 0 0 chr17 69167716 69167774 -26104877 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 1112 681 263 59 56 chr17 69168604 69168942 -26103709 - MER58D DNA MER1_type -2 384 46 2 1112 284 183 0 0 chr17 69169535 69169595 -26103056 - Lx5 LINE L1 -1210 4667 4608 2 1112 7068 143 10 15 chr17 69169594 69170343 -26102308 + Lx5 LINE L1 4701 5451 -426 2 1112 900 66 99 0 chr17 69170343 69170464 -26102187 + B1_Mus1 SINE Alu 3 135 -13 2 1112 297 0 0 0 chr17 69170464 69170497 -26102154 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 2 1112 7577 168 38 18 chr17 69170497 69172051 -26100600 + Lx5 LINE L1 5452 7047 -3 2 1112 1979 152 62 32 chr17 69173537 69173938 -26098713 - MTC LTR MaLR -8 413 1 2 1112 321 322 26 0 chr17 69174108 69174223 -26098428 - PB1D7 SINE Alu -1 119 2 2 1112 435 268 26 18 chr17 69174974 69175088 -26097563 - PB1D10 SINE Alu 0 117 3 2 1112 463 267 53 15 chr17 69175262 69175395 -26097256 - ORR1E LTR MaLR -212 147 10 2 1112 3357 54 0 0 chr17 69177468 69177902 -26094749 - L1Md_F2 LINE L1 0 6582 6154 2 1112 2895 47 0 0 chr17 69177902 69178245 -26094406 + L1Md_F2 LINE L1 5805 6147 -435 2 1112 2460 86 3 9 chr17 69178961 69179290 -26093361 - ORR1A2 LTR MaLR 0 327 1 2 1112 450 0 0 0 chr17 69179672 69179722 -26092929 + (GA)n Simple_repeat Simple_repeat 2 51 0 2 1112 184 59 59 0 chr17 69179916 69179950 -26092701 + (TCTCC)n Simple_repeat Simple_repeat 1 36 0 2 1112 373 299 65 51 chr17 69183256 69183471 -26089180 - MIR SINE MIR -14 248 31 2 1112 518 183 323 19 chr17 69183699 69183758 -26088893 - Lx9 LINE L1 -6 7638 7573 2 1112 279 0 0 0 chr17 69183758 69183789 -26088862 + (TC)n Simple_repeat Simple_repeat 1 31 0 2 1112 518 183 323 19 chr17 69183789 69183986 -26088665 - Lx9 LINE L1 -72 7572 7304 2 1112 444 227 126 0 chr17 69184001 69184120 -26088531 + Lx9 LINE L1 7059 7192 -452 2 1112 282 56 0 0 chr17 69184274 69184310 -26088341 + (TAA)n Simple_repeat Simple_repeat 1 36 0 2 1112 396 0 0 0 chr17 69185471 69185515 -26087136 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1112 227 193 0 50 chr17 69186312 69186372 -26086279 + G-rich Low_complexity Low_complexity 5 61 0 2 1112 288 0 0 0 chr17 69188277 69188309 -26084342 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1112 264 122 0 0 chr17 69190184 69190225 -26082426 + (TCC)n Simple_repeat Simple_repeat 1 41 0 2 1112 201 277 0 0 chr17 69190441 69190506 -26082145 + (CCG)n Simple_repeat Simple_repeat 3 67 0 2 1112 279 0 0 0 chr17 69193788 69193819 -26078832 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1112 194 377 8 16 chr17 69194808 69194932 -26077719 + MIR SINE MIR 119 241 -21 2 1112 429 274 14 49 chr17 69195104 69195246 -26077405 + MIR SINE MIR 116 252 -10 2 1112 950 167 0 6 chr17 69196773 69196954 -26075697 + GA-rich Low_complexity Low_complexity 1 180 0 2 1112 288 167 0 0 chr17 69199375 69199447 -26073204 + (TA)n Simple_repeat Simple_repeat 1 72 0 2 1112 249 33 0 0 chr17 69199526 69199556 -26073095 + (TC)n Simple_repeat Simple_repeat 2 31 0 2 1112 225 0 0 0 chr17 69199556 69199580 -26073071 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 1112 300 245 83 56 chr17 69201363 69201471 -26071180 - PB1D7 SINE Alu -7 113 3 2 1112 278 50 0 24 chr17 69202209 69202250 -26070401 + (TTA)n Simple_repeat Simple_repeat 2 41 0 2 1112 557 279 100 33 chr17 69202525 69202796 -26069855 + B4 SINE B4 4 292 0 2 1112 8758 20 0 0 chr17 69203014 69204247 -26068404 - L1Md_A LINE L1 0 6582 5350 2 1112 180 0 0 0 chr17 69204287 69204307 -26068344 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2 1112 200 364 0 0 chr17 69204717 69204794 -26067857 + G-rich Low_complexity Low_complexity 6 82 0 2 1112 908 291 107 14 chr17 69205164 69205519 -26067132 - MTD LTR MaLR -14 405 18 2 1113 255 148 111 0 chr17 69206086 69206140 -26066511 - Ricksha_c DNA MuDR -1701 347 288 2 1113 272 247 110 70 chr17 69206631 69206731 -26065920 - ERVL-int LTR ERVL -3110 2647 2544 2 1113 344 195 102 42 chr17 69207006 69207124 -26065527 - ERVL-E-int LTR ERVL -1225 4442 4318 2 1113 526 272 107 31 chr17 69207364 69207588 -26065063 - ERVL-E-int LTR ERVL -1894 3773 3533 2 1113 489 17 0 0 chr17 69208388 69208446 -26064205 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1113 238 275 87 0 chr17 69208625 69208694 -26063957 + ID4 SINE ID 9 83 0 2 1113 527 323 108 28 chr17 69209047 69209486 -26063165 + L1MB3 LINE L1 5698 6174 0 2 1113 332 248 0 10 chr17 69210012 69210114 -26062537 - HAL1-2a_MD LINE L1 -535 2489 2389 2 1113 312 278 113 0 chr17 69210788 69210885 -26061766 + ID_B1 SINE B4 2 109 -115 2 1113 379 278 61 51 chr17 69210921 69211118 -26061533 + MER2 DNA MER2_type 142 340 -5 2 1113 227 297 47 70 chr17 69211407 69211565 -26061086 + MER5A DNA MER1_type 20 173 -16 2 1113 388 342 112 12 chr17 69211875 69212198 -26060453 - MLT1B LTR MaLR 0 390 36 2 1113 616 232 63 42 chr17 69212730 69212983 -26059668 - ORR1E LTR MaLR -38 341 64 2 1113 264 30 0 0 chr17 69213838 69213871 -26058780 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 2 1113 451 250 48 0 chr17 69214567 69214671 -26057980 + RSINE1 SINE B4 5 113 -52 2 1113 566 262 122 79 chr17 69214994 69215272 -26057379 - B4A SINE B4 0 292 3 2 1113 280 318 0 0 chr17 69215306 69215372 -26057279 - PB1D10 SINE Alu -49 68 3 2 1113 41 87 0 0 chr17 69215939 69216043 -26056608 + AT_rich Low_complexity Low_complexity 1 104 0 2 1113 420 111 0 0 chr17 69216506 69216569 -26056082 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 1113 732 310 61 0 chr17 69216777 69217055 -26055596 + MTE2a LTR MaLR 1 302 -77 2 1113 552 140 0 0 chr17 69217086 69217179 -26055472 + (TCCC)n Simple_repeat Simple_repeat 2 94 0 2 1113 207 195 24 0 chr17 69217193 69217234 -26055417 + CT-rich Low_complexity Low_complexity 3 44 0 2 1113 226 374 43 0 chr17 69218328 69218443 -26054208 - MIRb SINE MIR -10 258 139 2 1113 21 0 0 0 chr17 69218674 69218695 -26053956 + AT_rich Low_complexity Low_complexity 1 21 0 2 1113 625 296 0 0 chr17 69218795 69218954 -26053697 + B3A SINE B2 22 180 -18 2 1113 801 296 123 28 chr17 69219054 69219371 -26053280 - MTE2a LTR MaLR -13 366 20 2 1113 703 282 93 32 chr17 69219453 69219764 -26052887 + MER2 DNA MER2_type 1 330 -15 2 1113 323 130 0 13 chr17 69219766 69219844 -26052807 + (TC)n Simple_repeat Simple_repeat 1 77 0 2 1113 238 262 127 30 chr17 69220131 69220328 -26052323 + L1M5 LINE L1 3111 3326 -2820 2 1113 483 18 0 0 chr17 69220418 69220474 -26052177 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 1113 358 332 36 77 chr17 69220474 69220722 -26051929 - Lx8 LINE L1 -32 7441 7204 2 1113 2039 212 72 8 chr17 69220722 69220815 -26051836 - RLTR16 LTR ERVK 0 505 413 2 1113 435 19 0 0 chr17 69220815 69220867 -26051784 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1113 2039 212 72 8 chr17 69220867 69221243 -26051408 - RLTR16 LTR ERVK -93 412 8 2 1113 2610 158 78 13 chr17 69221714 69222241 -26050410 + RLTR31_Mm LTR ERVK 1 561 0 2 1113 425 272 88 64 chr17 69222398 69222602 -26050049 - Lx8 LINE L1 -299 7174 6966 2 1113 22 0 0 0 chr17 69224081 69224103 -26048548 + AT_rich Low_complexity Low_complexity 1 22 0 2 1113 376 321 52 0 chr17 69226198 69226332 -26046319 - MER20 DNA MER1_type 0 219 79 2 1113 297 0 0 0 chr17 69226521 69226554 -26046097 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1113 369 0 0 0 chr17 69228025 69228066 -26044585 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1113 351 0 0 0 chr17 69228066 69228105 -26044546 + (GA)n Simple_repeat Simple_repeat 2 40 0 2 1113 692 88 40 23 chr17 69228218 69228392 -26044259 + (TCTA)n Simple_repeat Simple_repeat 1 177 0 2 1113 236 224 35 0 chr17 69228863 69228921 -26043730 + RMER15 LTR ERVL 1 60 -515 2 1113 1265 275 118 19 chr17 69228948 69229433 -26043218 + RMER15 LTR ERVL 43 575 0 2 1113 417 360 12 17 chr17 69229773 69230013 -26042638 + L1MC4a LINE L1 6365 6603 -1279 2 1113 646 305 120 36 chr17 69230158 69230402 -26042249 + L1MC4a LINE L1 7264 7530 -352 2 1113 258 32 0 0 chr17 69230402 69230433 -26042218 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 2 1113 646 305 120 36 chr17 69230433 69230739 -26041912 + L1MC4a LINE L1 7531 7860 -22 2 1113 279 262 53 33 chr17 69230935 69231085 -26041566 + RSINE1 SINE B4 3 155 -10 2 1113 317 261 0 0 chr17 69231535 69231600 -26041051 - MER68 LTR ERVL -301 262 198 2 1113 257 311 89 8 chr17 69231753 69231876 -26040775 - MIRb SINE MIR -19 249 117 2 1113 315 200 14 0 chr17 69231923 69231993 -26040658 - Lx5 LINE L1 -2 7048 6978 2 1113 714 102 0 0 chr17 69233472 69233599 -26039052 + (GA)n Simple_repeat Simple_repeat 2 128 0 2 1113 374 233 92 49 chr17 69233771 69233956 -26038695 + MTC-int LTR MaLR 1066 1258 0 2 1113 289 227 340 0 chr17 69233984 69234178 -26038473 + MTD LTR MaLR 61 320 -99 2 1113 436 316 0 0 chr17 69235345 69235459 -26037192 - ID_B1 SINE B4 -24 200 87 2 1113 1199 41 7 0 chr17 69235479 69235625 -26037026 + B1_Mm SINE Alu 1 147 0 2 1113 14479 20 0 0 chr17 69236758 69238418 -26034233 - L1Md_T LINE L1 -956 4927 3268 2 1113 5989 16 0 0 chr17 69238418 69239089 -26033562 + L1Md_T LINE L1 4916 5586 -297 2 1113 8633 33 0 0 chr17 69239090 69240085 -26032566 + L1Md_T LINE L1 5588 6582 0 2 1113 275 302 47 0 chr17 69240768 69240854 -26031797 + ORR1E LTR MaLR 270 359 0 2 1113 730 330 97 20 chr17 69241226 69241616 -26031035 - MER21B LTR ERV1 -63 800 381 2 1113 627 299 104 36 chr17 69242720 69243056 -26029595 + MTEa LTR MaLR 2 360 -19 2 1113 272 314 61 43 chr17 69244645 69244808 -26027843 - MLT1A0 LTR MaLR -13 352 187 2 1113 439 172 40 7 chr17 69245692 69245844 -26026807 + (TATAG)n Simple_repeat Simple_repeat 5 161 0 2 1113 2212 183 33 9 chr17 69245976 69246395 -26026256 - Lx9 LINE L1 -128 7516 7088 2 1113 297 284 24 51 chr17 69246932 69247100 -26025551 - MTEb LTR MaLR 0 379 203 2 1113 3775 37 5 0 chr17 69247100 69247534 -26025117 + RLTR10C LTR ERVK 1 436 0 2 1113 296 340 30 71 chr17 69247534 69247662 -26024989 - MTEb LTR MaLR -157 202 77 2 1113 189 0 0 0 chr17 69249995 69250016 -26022635 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 1113 301 189 8 69 chr17 69250055 69250186 -26022465 + CT-rich Low_complexity Low_complexity 5 127 0 3 1113 282 29 0 0 chr17 69250192 69250227 -26022424 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1113 411 181 35 27 chr17 69250453 69250709 -26021942 + (TATATG)n Simple_repeat Simple_repeat 1 258 0 3 1113 1257 239 88 13 chr17 69250709 69251083 -26021568 + MTD LTR MaLR 6 407 -12 3 1113 1154 75 7 0 chr17 69251090 69251236 -26021415 + B1_Mus1 SINE Alu 2 148 0 3 1113 353 192 297 7 chr17 69251878 69252030 -26020621 + Lx9 LINE L1 7394 7590 -54 3 1113 371 326 67 21 chr17 69252237 69252475 -26020176 - MER2 DNA MER2_type 0 345 97 3 1113 1085 123 6 0 chr17 69252498 69252846 -26019805 + (TTC)n Simple_repeat Simple_repeat 1 349 0 3 1113 765 135 0 0 chr17 69252846 69252972 -26019679 + (TCC)n Simple_repeat Simple_repeat 3 128 0 3 1113 346 241 8 51 chr17 69253237 69253355 -26019296 + ID_B1 SINE B4 104 216 -8 3 1113 262 279 29 0 chr17 69254201 69254269 -26018382 + (CATA)n Simple_repeat Simple_repeat 1 70 0 3 1113 248 333 6 0 chr17 69254272 69254440 -26018211 + (CA)n Simple_repeat Simple_repeat 2 170 0 3 1113 180 297 0 0 chr17 69254510 69254584 -26018067 + (CA)n Simple_repeat Simple_repeat 1 74 0 3 1113 198 0 0 0 chr17 69254788 69254810 -26017841 + (CTTG)n Simple_repeat Simple_repeat 1 22 0 3 1113 243 402 0 0 chr17 69256830 69256912 -26015739 - ID4_ SINE ID 0 83 2 3 1113 671 174 0 22 chr17 69257087 69257222 -26015429 - Lx7 LINE L1 0 7696 7565 3 1113 1217 261 125 44 chr17 69257229 69257726 -26014925 - RMER1A Other Other -431 599 63 3 1113 1780 173 105 8 chr17 69257729 69258102 -26014549 + RMER1B Other Other 653 1061 -5 3 1113 5641 235 33 22 chr17 69258104 69259394 -26013257 - Lx6 LINE L1 -137 7323 6021 3 1113 4796 88 5 14 chr17 69260888 69261544 -26011107 + L1_Mus3 LINE L1 5989 6638 0 3 1113 302 348 54 42 chr17 69261721 69261961 -26010690 - L1MB1 LINE L1 -281 5887 5645 3 1113 632 108 20 0 chr17 69262097 69262199 -26010452 + (GAAA)n Simple_repeat Simple_repeat 2 105 0 3 1113 369 0 0 0 chr17 69262200 69262241 -26010410 + (CAGG)n Simple_repeat Simple_repeat 1 41 0 3 1113 242 302 116 0 chr17 69262465 69262551 -26010100 + ID_B1 SINE B4 1 96 -128 3 1113 322 295 45 153 chr17 69262682 69263034 -26009617 + MLT1C LTR MaLR 8 321 -69 3 1113 216 0 0 0 chr17 69263876 69263900 -26008751 + (A)n Simple_repeat Simple_repeat 1 24 0 3 1113 789 248 75 18 chr17 69264064 69264343 -26008308 - RMER15 LTR ERVL -2 573 279 3 1113 2903 81 44 0 chr17 69264664 69265047 -26007604 - MTB LTR MaLR 0 400 1 3 1113 186 43 0 0 chr17 69266280 69266303 -26006348 + (TCC)n Simple_repeat Simple_repeat 3 25 0 3 1113 284 356 71 25 chr17 69267590 69267786 -26004865 + L1M4b LINE L1 207 411 -6923 3 1113 426 228 0 0 chr17 69268037 69268116 -26004535 + L1M4b LINE L1 730 808 -6526 3 1113 718 252 40 55 chr17 69268156 69268429 -26004222 + L1M4b LINE L1 5026 5294 -1712 3 1113 357 176 0 0 chr17 69268439 69268513 -26004138 + (TA)n Simple_repeat Simple_repeat 2 75 0 3 1113 1181 52 7 0 chr17 69270337 69270491 -26002160 + L1Md_F2 LINE L1 6416 6570 -12 3 1113 531 293 24 33 chr17 69270920 69271132 -26001519 + B3 SINE B2 1 210 -6 3 1113 21 0 0 0 chr17 69271657 69271678 -26000973 + AT_rich Low_complexity Low_complexity 1 21 0 3 1113 2184 145 3 3 chr17 69271678 69272010 -26000641 - Lx4A LINE L1 -1 7057 6726 3 1113 3091 65 47 34 chr17 69272144 69272590 -26000061 - Lx3_Mus LINE L1 -1 7008 6557 3 1113 329 229 40 45 chr17 69272706 69272853 -25999798 - PB1D10 SINE Alu -1 148 6 3 1113 369 0 0 0 chr17 69273234 69273275 -25999376 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1113 310 301 116 27 chr17 69274208 69274355 -25998296 - MLT1D LTR MaLR -38 467 308 3 1113 625 286 15 30 chr17 69275150 69275348 -25997303 - ID_B1 SINE B4 -29 195 1 3 1113 795 50 0 0 chr17 69275518 69275618 -25997033 + (GA)n Simple_repeat Simple_repeat 2 101 0 3 1113 339 246 0 0 chr17 69275622 69275764 -25996887 + (CAGG)n Simple_repeat Simple_repeat 3 144 0 3 1113 810 210 18 0 chr17 69275764 69275931 -25996720 + B3 SINE B2 47 216 0 3 1113 693 45 0 0 chr17 69276407 69276496 -25996155 + (TG)n Simple_repeat Simple_repeat 1 89 0 3 1113 212 79 53 0 chr17 69276496 69276534 -25996117 + (CAGAGA)n Simple_repeat Simple_repeat 2 41 0 3 1113 324 268 8 0 chr17 69276534 69276661 -25995990 + (TG)n Simple_repeat Simple_repeat 1 128 0 3 1113 198 156 0 0 chr17 69276671 69276716 -25995935 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 3 1113 508 161 15 30 chr17 69277484 69277618 -25995033 - Lx9 LINE L1 -8 7636 7505 3 1113 797 174 26 0 chr17 69277618 69277773 -25994878 - Lx2 LINE L1 -30 6967 6809 3 1113 945 203 168 62 chr17 69277784 69278357 -25994294 - Lx9 LINE L1 -1237 6407 5731 3 1113 305 347 0 10 chr17 69278763 69278859 -25993792 - PB1D10 SINE Alu -22 95 1 3 1113 1120 218 227 103 chr17 69279313 69279792 -25992859 + RLTR20D LTR ERVK 3 568 0 3 1113 4036 152 5 3 chr17 69279998 69280670 -25991981 + RLTR33 LTR ERVK 6 678 0 3 1113 215 339 0 0 chr17 69280722 69280787 -25991864 + CT-rich Low_complexity Low_complexity 2 66 0 3 1113 24 53 0 0 chr17 69282424 69282462 -25990189 + AT_rich Low_complexity Low_complexity 1 38 0 3 1113 233 273 51 13 chr17 69283077 69283155 -25989496 - ID4 SINE ID -2 81 1 3 1113 215 265 64 64 chr17 69284277 69284386 -25988265 - MIRb SINE MIR -3 265 157 3 1113 786 228 117 12 chr17 69284861 69285110 -25987541 + L1MA6 LINE L1 6015 6289 -11 3 1113 222 191 0 0 chr17 69285116 69285163 -25987488 + A-rich Low_complexity Low_complexity 3 49 0 3 1113 256 336 19 0 chr17 69286174 69286281 -25986370 + ID_B1 SINE B4 79 187 -37 3 1113 320 268 51 10 chr17 69286190 69286288 -25986363 + B1F1 SINE Alu 14 115 -34 3 1113 203 304 0 0 chr17 69286320 69286376 -25986275 - MER5A DNA MER1_type -76 113 58 3 1113 588 252 4 0 chr17 69287623 69287875 -25984776 + (TG)n Simple_repeat Simple_repeat 1 253 0 3 1113 235 360 60 78 chr17 69289004 69289221 -25983430 + Tigger5 DNA MER2_type 15 227 -2179 3 1113 226 290 39 20 chr17 69290158 69290260 -25982391 + MLT1N2 LTR MaLR 444 547 -15 3 1113 291 351 110 5 chr17 69290414 69290623 -25982028 - MLT2B3 LTR ERVL -66 488 258 3 1113 2264 86 54 17 chr17 69290973 69291327 -25981324 - IAPLTR1_Mm LTR ERVK 0 367 1 3 1113 56336 28 6 5 chr17 69291329 69297767 -25974884 - IAPEz-int LTR ERVK -2 6479 34 3 1113 2264 86 54 17 chr17 69297777 69298131 -25974520 - IAPLTR1_Mm LTR ERVK 0 367 1 3 1113 384 59 0 0 chr17 69298590 69298641 -25974010 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 1113 6279 74 11 93 chr17 69298726 69299699 -25972952 + RLTR13B1 LTR ERVK 1 893 0 3 1113 623 325 17 42 chr17 69299747 69300036 -25972615 - B4A SINE B4 -3 289 8 3 1113 486 256 17 0 chr17 69300103 69300220 -25972431 - ID_B1 SINE B4 -1 223 105 3 1113 1655 185 60 34 chr17 69300546 69300960 -25971691 + BGLII_B LTR ERVK 7 431 -10 3 1113 185 0 40 0 chr17 69301357 69301382 -25971269 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 3 1113 444 19 0 0 chr17 69301484 69301537 -25971114 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 3 1113 788 177 68 62 chr17 69301537 69301777 -25970874 + RLTR11A LTR ERVK 287 518 -59 3 1113 329 315 108 35 chr17 69302784 69303070 -25969581 - RMER5 LTR ERV1 -49 485 179 3 1113 27 0 0 0 chr17 69304416 69304443 -25968208 + GC_rich Low_complexity Low_complexity 1 27 0 3 1113 22 0 0 0 chr17 69305557 69305579 -25967072 + AT_rich Low_complexity Low_complexity 1 22 0 3 1113 1861 129 46 0 chr17 69305593 69305896 -25966755 - ORR1A2 LTR MaLR 0 327 11 3 1113 216 0 0 0 chr17 69306324 69306348 -25966303 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1113 293 311 65 32 chr17 69307837 69307960 -25964691 + HAL1 LINE L1 522 648 -1859 3 1113 28 48 0 0 chr17 69308061 69308103 -25964548 + AT_rich Low_complexity Low_complexity 1 42 0 3 1113 514 252 67 8 chr17 69311639 69311759 -25960892 + RSINE1 SINE B4 2 128 -37 3 1113 405 0 0 0 chr17 69313889 69313934 -25958717 + (TC)n Simple_repeat Simple_repeat 2 46 0 3 1113 333 0 0 0 chr17 69313934 69313970 -25958681 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1113 838 344 74 64 chr17 69314171 69314964 -25957687 - Lx8 LINE L1 -93 7380 6580 3 1113 2026 318 58 52 chr17 69315214 69316356 -25956295 - L1_Rod LINE L1 -11 5869 4718 3 1113 1536 213 50 30 chr17 69316356 69316719 -25955932 - ORR1D2 LTR MaLR 0 370 1 3 1113 2026 318 58 52 chr17 69316719 69316796 -25955855 - L1_Rod LINE L1 -1163 4717 4643 3 1113 391 315 65 28 chr17 69316893 69317389 -25955262 - L1_Rod LINE L1 -4463 1417 914 3 1113 411 390 18 0 chr17 69317667 69317836 -25954815 - B4A SINE B4 -116 176 5 3 1113 282 143 0 0 chr17 69318111 69318160 -25954491 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 1113 800 190 0 26 chr17 69318484 69318635 -25954016 - B1_Mus1 SINE Alu -1 147 1 3 1113 231 200 18 0 chr17 69318695 69318724 -25953927 + polypurine Low_complexity Low_complexity 2 31 0 3 1113 3549 25 0 2 chr17 69318724 69319121 -25953530 - MTA_Mm LTR MaLR 0 396 1 3 1113 231 200 18 0 chr17 69319121 69319146 -25953505 + polypurine Low_complexity Low_complexity 32 56 0 3 1113 1133 214 187 18 chr17 69319662 69320005 -25952646 - MTD LTR MaLR -5 414 14 3 1113 23 33 0 0 chr17 69320081 69320111 -25952540 + AT_rich Low_complexity Low_complexity 1 30 0 3 1113 310 292 77 69 chr17 69321458 69321719 -25950932 + L1M5 LINE L1 5411 5673 -451 3 1113 419 253 206 9 chr17 69322006 69322225 -25950426 + MTE2b LTR MaLR 1 262 -117 3 1113 258 330 47 0 chr17 69322338 69322444 -25950207 - MER2 DNA MER2_type -118 227 117 3 1113 852 196 50 61 chr17 69322580 69322826 -25949825 + ORR1B2 LTR MaLR 1 252 -118 3 1113 364 331 31 31 chr17 69322852 69323011 -25949640 + RSINE1 SINE B4 7 165 0 4 1113 188 182 0 22 chr17 69323018 69323063 -25949588 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1113 189 0 0 0 chr17 69323183 69323204 -25949447 + (CAGAGA)n Simple_repeat Simple_repeat 2 22 0 4 1113 1853 141 102 16 chr17 69323235 69323606 -25949045 + RMER17B LTR ERVK 1 406 -552 4 1113 572 0 15 0 chr17 69323606 69323674 -25948977 + (TC)n Simple_repeat Simple_repeat 2 70 0 4 1113 1853 265 406 68 chr17 69323674 69323947 -25948704 + RMER17B LTR ERVK 407 769 -189 4 1113 273 256 16 8 chr17 69323949 69324075 -25948576 + (CA)n Simple_repeat Simple_repeat 2 128 0 4 1113 2071 216 194 2 chr17 69324441 69325012 -25947639 - RMER1B Other Other -9 1057 377 4 1113 267 103 0 0 chr17 69325623 69325662 -25946989 + (T)n Simple_repeat Simple_repeat 1 39 0 4 1113 261 83 0 0 chr17 69326185 69326221 -25946430 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 1113 393 320 42 52 chr17 69326262 69326549 -25946102 - B4A SINE B4 -4 288 5 4 1113 3851 48 19 12 chr17 69326632 69327119 -25945532 - L1_Mus1 LINE L1 -15 6552 6063 4 1113 231 319 27 27 chr17 69328203 69328277 -25944374 + MIRb SINE MIR 5 78 -190 4 1113 333 331 29 51 chr17 69328469 69328644 -25944007 + B4A SINE B4 121 291 -1 4 1113 316 91 20 102 chr17 69328650 69328846 -25943805 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 1113 299 120 76 8 chr17 69328906 69329024 -25943627 + (CACAT)n Simple_repeat Simple_repeat 4 129 0 4 1113 331 129 0 16 chr17 69329024 69329087 -25943564 + HAL1-3A_ME LINE L1 1975 2036 -822 4 1113 186 167 0 0 chr17 69329781 69329817 -25942834 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1113 223 293 13 0 chr17 69331587 69331662 -25940989 + (CA)n Simple_repeat Simple_repeat 1 76 0 4 1113 1037 267 49 108 chr17 69332671 69333061 -25939590 + ORR1D2 LTR MaLR 1 367 -3 4 1113 2155 90 0 58 chr17 69333315 69333657 -25938994 + ORR1A2 LTR MaLR 6 327 0 4 1113 1788 216 34 15 chr17 69334120 69334529 -25938122 + MTD LTR MaLR 1 417 -2 4 1113 405 0 0 0 chr17 69334643 69334688 -25937963 + (GA)n Simple_repeat Simple_repeat 1 45 0 4 1113 4085 53 0 19 chr17 69335045 69335568 -25937083 - L1Md_F3 LINE L1 -12 6572 6060 4 1113 230 300 17 0 chr17 69335581 69335641 -25937010 - ID_B1 SINE B4 -78 146 86 4 1113 213 308 68 7 chr17 69336024 69336171 -25936480 + (CAGAGA)n Simple_repeat Simple_repeat 1 156 0 4 1114 403 33 16 16 chr17 69338022 69338084 -25934567 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 4 1114 975 82 0 0 chr17 69338087 69338222 -25934429 - B1_Mus2 SINE Alu -6 141 7 4 1114 563 278 8 109 chr17 69338222 69338325 -25934326 - ID_B1 SINE B4 -6 218 5 4 1114 1887 205 63 28 chr17 69338749 69339180 -25933471 - RLTR41 LTR ERV1 0 446 1 4 1114 409 318 41 12 chr17 69339320 69339492 -25933159 - MuRRS4-int LTR ERV1 -174 4889 4713 4 1114 335 211 192 15 chr17 69340247 69340377 -25932274 + ORR1A3-int LTR MaLR 855 1007 -956 4 1114 503 167 27 160 chr17 69340325 69340475 -25932176 + RLTR25B LTR ERVK 628 831 -272 4 1114 701 150 0 8 chr17 69341913 69342047 -25930604 + (TG)n Simple_repeat Simple_repeat 1 133 0 4 1114 980 98 18 6 chr17 69342102 69342267 -25930384 - URR1A DNA MER1_type -1 225 59 4 1114 657 297 58 29 chr17 69342287 69342564 -25930087 - MER2 DNA MER2_type -59 286 2 4 1114 228 35 0 0 chr17 69342570 69342599 -25930052 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1114 327 25 0 0 chr17 69342849 69342889 -25929762 + (CAGA)n Simple_repeat Simple_repeat 4 43 0 4 1114 317 315 38 23 chr17 69342988 69343121 -25929530 - B1F SINE Alu -13 136 2 4 1114 230 265 126 26 chr17 69344916 69345067 -25927584 - L1M2 LINE L1 -664 5636 5471 4 1114 365 321 91 36 chr17 69345237 69345512 -25927139 - L1M2 LINE L1 -744 5399 5110 4 1114 8195 137 23 25 chr17 69346298 69347643 -25925008 - Lx4A LINE L1 -2 7056 5714 4 1114 897 113 0 8 chr17 69347642 69347776 -25924875 + L1_Mur2 LINE L1 4152 4284 -1593 4 1114 467 231 53 35 chr17 69349922 69350084 -25922567 - MTE2b LTR MaLR -33 337 183 4 1114 198 267 161 32 chr17 69350102 69350226 -25922425 - MIRb SINE MIR -110 158 19 4 1114 569 246 0 35 chr17 69352442 69352731 -25919920 + (TG)n Simple_repeat Simple_repeat 1 278 0 4 1114 375 277 53 58 chr17 69352945 69353152 -25919499 + L1ME2 LINE L1 5958 6163 -1 4 1114 498 204 0 0 chr17 69353891 69353999 -25918652 + T-rich Low_complexity Low_complexity 1 108 0 4 1114 842 232 14 36 chr17 69354386 69354605 -25918046 + B3 SINE B2 1 214 -2 4 1114 465 151 0 0 chr17 69355219 69355305 -25917346 + (TGAA)n Simple_repeat Simple_repeat 3 88 0 4 1114 3045 150 34 96 chr17 69355668 69356019 -25916632 - RLTR26 LTR ERVK 0 642 327 4 1114 2011 76 46 71 chr17 69356019 69356345 -25916306 - L1_Mus3 LINE L1 -3 6635 6318 4 1114 3045 150 34 96 chr17 69356345 69356678 -25915973 - RLTR26 LTR ERVK -316 326 1 4 1114 333 240 0 0 chr17 69357382 69357478 -25915173 + (TG)n Simple_repeat Simple_repeat 1 96 0 4 1114 438 276 0 0 chr17 69357493 69357667 -25914984 + (TG)n Simple_repeat Simple_repeat 2 175 0 4 1114 348 130 0 0 chr17 69357673 69357742 -25914909 + (GA)n Simple_repeat Simple_repeat 1 69 0 4 1114 182 358 109 9 chr17 69358004 69358114 -25914537 + MIRb SINE MIR 112 232 -36 4 1114 479 135 61 35 chr17 69358531 69358646 -25914005 + Lx9 LINE L1 7520 7637 -7 4 1114 198 0 0 0 chr17 69358922 69358944 -25913707 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 4 1114 1160 68 7 0 chr17 69358945 69359091 -25913560 - B1_Mm SINE Alu 0 147 1 4 1114 3090 41 0 27 chr17 69359704 69360079 -25912572 + RLTR10B2 LTR ERVK 1 365 0 4 1114 467 212 9 0 chr17 69361454 69361801 -25910850 + (TG)n Simple_repeat Simple_repeat 1 350 0 4 1114 684 321 40 11 chr17 69362529 69362806 -25909845 + B4A SINE B4 2 286 -6 4 1114 202 246 0 17 chr17 69362809 69362867 -25909784 + (CATA)n Simple_repeat Simple_repeat 1 57 0 4 1114 507 69 0 0 chr17 69362881 69362953 -25909698 + (TC)n Simple_repeat Simple_repeat 1 72 0 4 1114 225 65 0 0 chr17 69362972 69363003 -25909648 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 1114 384 284 52 29 chr17 69363050 69363224 -25909427 + MER5A DNA MER1_type 1 178 -11 4 1114 237 65 0 0 chr17 69364595 69364626 -25908025 + (TTG)n Simple_repeat Simple_repeat 3 33 0 4 1114 180 0 0 0 chr17 69364626 69364646 -25908005 + (CAT)n Simple_repeat Simple_repeat 1 20 0 4 1114 547 195 0 47 chr17 69365048 69365220 -25907431 + CT-rich Low_complexity Low_complexity 2 165 0 4 1114 23 0 0 0 chr17 69366073 69366096 -25906555 + AT_rich Low_complexity Low_complexity 1 23 0 4 1114 831 252 78 25 chr17 69366300 69366544 -25906107 - MTD LTR MaLR -145 274 18 4 1114 586 209 11 11 chr17 69367458 69367632 -25905019 + (CATA)n Simple_repeat Simple_repeat 4 177 0 4 1114 558 247 0 0 chr17 69367638 69367816 -25904835 + (CA)n Simple_repeat Simple_repeat 2 179 0 4 1114 725 251 105 5 chr17 69367830 69368030 -25904621 + B4 SINE B4 73 292 0 4 1114 1609 174 43 83 chr17 69368081 69368476 -25904175 + ORR1B1 LTR MaLR 16 394 0 4 1114 341 348 43 23 chr17 69368793 69369049 -25903602 + L1M5 LINE L1 5293 5553 -687 4 1114 519 189 0 0 chr17 69369099 69369221 -25903430 + (TG)n Simple_repeat Simple_repeat 1 122 0 4 1114 557 220 185 24 chr17 69369596 69369696 -25902955 - Tigger7 DNA MER2_type -2 2489 2389 4 1114 911 65 26 0 chr17 69369696 69369849 -25902802 + (CA)n Simple_repeat Simple_repeat 2 158 0 4 1114 557 220 185 24 chr17 69369849 69369953 -25902698 - Tigger7 DNA MER2_type -103 2388 2252 4 1114 3047 44 3 3 chr17 69370564 69370931 -25901720 + L1Md_F3 LINE L1 5220 5586 -297 4 1114 8355 42 2 0 chr17 69370931 69371916 -25900735 + L1Md_F3 LINE L1 5587 6573 -11 4 1114 621 294 82 76 chr17 69371949 69372291 -25900360 - MER2 DNA MER2_type 0 345 2 4 1114 1307 336 102 51 chr17 69372326 69373087 -25899564 + Lx8 LINE L1 6494 7293 -180 4 1114 402 21 0 0 chr17 69373168 69373215 -25899436 + (ACTG)n Simple_repeat Simple_repeat 3 49 0 4 1114 936 194 4 0 chr17 69373743 69374025 -25898626 + CT-rich Low_complexity Low_complexity 1 283 0 4 1114 244 265 0 0 chr17 69374025 69374074 -25898577 + C-rich Low_complexity Low_complexity 3 51 0 4 1114 235 328 0 0 chr17 69374866 69374933 -25897718 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 1114 29 28 0 0 chr17 69375357 69375393 -25897258 + AT_rich Low_complexity Low_complexity 1 36 0 4 1114 315 349 0 9 chr17 69377794 69377901 -25894750 + CT-rich Low_complexity Low_complexity 3 108 0 4 1114 384 22 0 0 chr17 69378088 69378133 -25894518 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 1114 311 306 71 28 chr17 69378135 69378347 -25894304 - Tigger7 DNA MER2_type -121 2370 2150 4 1114 304 389 62 25 chr17 69378400 69378640 -25894011 - Tigger7 DNA MER2_type -2232 259 11 4 1114 388 314 88 37 chr17 69378831 69379046 -25893605 - MIRb SINE MIR -6 262 37 4 1114 1348 84 5 24 chr17 69380499 69380706 -25891945 + MTB LTR MaLR 1 203 -204 4 1114 2709 23 14 0 chr17 69380707 69381066 -25891585 - L1Md_F3 LINE L1 -408 6174 5783 4 1114 1877 39 0 17 chr17 69381066 69381358 -25891293 + L1Md_F3 LINE L1 6343 6584 0 4 1114 1501 26 5 0 chr17 69381361 69381551 -25891100 + MTB LTR MaLR 210 400 0 4 1114 329 192 80 27 chr17 69382149 69382224 -25890427 + ID4_ SINE ID 2 80 -3 4 1114 362 296 111 75 chr17 69383569 69383821 -25888830 + B4 SINE B4 10 270 -22 4 1114 349 198 9 9 chr17 69383912 69384024 -25888627 + (CA)n Simple_repeat Simple_repeat 1 112 0 4 1114 1149 88 0 0 chr17 69384425 69384572 -25888079 + B1_Mm SINE Alu 1 147 0 4 1114 771 60 37 15 chr17 69385026 69385162 -25887489 + (TAGA)n Simple_repeat Simple_repeat 1 139 0 4 1114 307 290 53 21 chr17 69386102 69386197 -25886454 - B1F SINE Alu -51 98 1 4 1114 765 251 21 34 chr17 69386805 69387044 -25885607 + B4 SINE B4 1 236 -56 4 1114 277 278 11 32 chr17 69387838 69387931 -25884720 + PB1D10 SINE Alu 27 117 0 4 1114 186 103 0 0 chr17 69388857 69388886 -25883765 + (CCCCCT)n Simple_repeat Simple_repeat 5 33 0 4 1114 414 0 0 0 chr17 69389037 69389083 -25883568 + (TC)n Simple_repeat Simple_repeat 2 47 0 4 1114 598 203 23 23 chr17 69389841 69389972 -25882679 + B1F2 SINE Alu 18 148 -1 4 1114 282 73 0 0 chr17 69390113 69390154 -25882497 + (TTG)n Simple_repeat Simple_repeat 2 42 0 5 1114 243 0 0 0 chr17 69390645 69390672 -25881979 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1114 415 248 43 0 chr17 69391753 69391870 -25880781 + MER53 DNA hAT 1 122 -71 5 1114 543 213 0 0 chr17 69391883 69392134 -25880517 + (TG)n Simple_repeat Simple_repeat 1 251 0 5 1114 664 253 27 53 chr17 69393165 69393353 -25879298 + B3A SINE B2 3 185 -13 5 1114 495 285 9 131 chr17 69393360 69393582 -25879069 + B4 SINE B4 94 288 -4 5 1114 432 111 0 0 chr17 69393783 69393864 -25878787 + (CATA)n Simple_repeat Simple_repeat 2 82 0 5 1114 2198 94 65 0 chr17 69393865 69394172 -25878479 + ORR1A2 LTR MaLR 1 327 0 5 1114 1087 260 13 33 chr17 69394626 69394932 -25877719 + Lx6 LINE L1 7039 7338 -122 5 1114 4783 141 60 19 chr17 69394929 69395070 -25877581 - L1_Mur2 LINE L1 -475 5402 5269 5 1114 3187 42 44 0 chr17 69395070 69395453 -25877198 + MTB LTR MaLR 1 400 0 5 1114 4783 141 60 19 chr17 69395453 69395485 -25877166 - L1_Mur2 LINE L1 -609 5268 5218 5 1114 441 0 0 0 chr17 69395485 69395534 -25877117 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1114 4783 141 60 19 chr17 69395534 69396230 -25876421 - L1_Mur2 LINE L1 -660 5217 4497 5 1114 180 0 0 0 chr17 69397132 69397152 -25875499 + (CTATT)n Simple_repeat Simple_repeat 4 23 0 5 1114 2010 148 12 20 chr17 69397153 69397499 -25875152 - ORR1B2 LTR MaLR -24 343 1 5 1114 240 320 9 48 chr17 69398028 69398133 -25874518 - B1F SINE Alu -48 101 1 5 1114 329 286 9 37 chr17 69398924 69399033 -25873618 + PB1D10 SINE Alu 3 108 -9 5 1114 372 300 109 102 chr17 69399085 69399293 -25873358 + L1MB3 LINE L1 5599 5795 -388 5 1114 384 22 0 0 chr17 69399293 69399338 -25873313 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1114 372 300 109 102 chr17 69399338 69399678 -25872973 + L1MB3 LINE L1 5796 6151 -32 5 1114 774 245 160 47 chr17 69399993 69400149 -25872502 + ORR1C1 LTR MaLR 1 164 -214 5 1114 1155 87 0 0 chr17 69400149 69400310 -25872341 + (TC)n Simple_repeat Simple_repeat 2 162 0 5 1114 774 216 165 41 chr17 69400310 69400485 -25872166 + ORR1C1 LTR MaLR 165 378 0 5 1114 568 309 152 66 chr17 69402436 69402677 -25869974 + MT2A LTR ERVL 1 227 -306 5 1114 183 42 0 0 chr17 69402677 69402701 -25869950 + (CTG)n Simple_repeat Simple_repeat 3 26 0 5 1114 568 309 152 66 chr17 69402701 69402947 -25869704 + MT2A LTR ERVL 228 530 -3 5 1114 617 185 107 36 chr17 69404503 69404643 -25868008 + B3A SINE B2 1 150 -48 5 1114 483 18 0 0 chr17 69404646 69404702 -25867949 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 1114 25 31 0 0 chr17 69404702 69404734 -25867917 + AT_rich Low_complexity Low_complexity 1 32 0 5 1114 258 81 0 0 chr17 69405811 69405848 -25866803 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1114 1988 112 12 60 chr17 69406698 69407032 -25865619 + ORR1A3 LTR MaLR 1 318 -8 5 1114 395 303 44 25 chr17 69407408 69407567 -25865084 + RSINE1 SINE B4 3 164 -1 5 1114 495 0 0 0 chr17 69408039 69408094 -25864557 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 1114 447 348 16 5 chr17 69409471 69409659 -25862992 + Charlie1 DNA MER1_type 8 197 -2584 5 1114 346 229 52 0 chr17 69409668 69409764 -25862887 + Charlie1 DNA MER1_type 2642 2742 -39 5 1114 2112 114 6 66 chr17 69410559 69410906 -25861745 + ORR1A3 LTR MaLR 1 326 0 5 1114 220 200 196 22 chr17 69412192 69412284 -25860367 - B1F SINE Alu -33 116 9 5 1114 869 231 29 9 chr17 69413064 69413274 -25859377 + B3 SINE B2 3 216 0 5 1114 313 292 67 37 chr17 69413380 69413515 -25859136 + RSINE1 SINE B4 2 140 -25 5 1114 871 229 15 30 chr17 69413835 69414033 -25858618 - B3A SINE B2 -3 195 1 5 1114 460 278 20 28 chr17 69414895 69415115 -25857536 + L1_Rod LINE L1 5639 5847 0 5 1114 662 193 8 0 chr17 69415154 69415273 -25857378 - B1_Mur2 SINE Alu -6 143 24 5 1114 974 54 8 0 chr17 69415616 69415745 -25856906 + (TTTC)n Simple_repeat Simple_repeat 3 132 0 5 1114 1062 52 15 0 chr17 69415756 69415891 -25856760 - B1_Mus1 SINE Alu -10 138 2 5 1114 183 129 0 0 chr17 69416304 69416335 -25856316 + (TGGGGG)n Simple_repeat Simple_repeat 6 36 0 5 1114 2136 137 12 0 chr17 69416361 69416683 -25855968 + ORR1A3 LTR MaLR 1 326 0 5 1114 352 359 66 25 chr17 69419737 69420103 -25852548 - L2a LINE L2 -26 3400 3020 5 1114 969 214 10 5 chr17 69420320 69420517 -25852134 - B4 SINE B4 -87 205 8 5 1114 292 190 24 60 chr17 69420650 69420734 -25851917 - L2 LINE L2 -745 2674 2594 5 1114 380 322 92 92 chr17 69421004 69421547 -25851104 + L1MC4a LINE L1 6527 7069 -813 5 1114 371 340 127 21 chr17 69421667 69422006 -25850645 + L1MC4a LINE L1 7304 7678 -364 5 1114 294 214 23 45 chr17 69422329 69422417 -25850234 - PB1D10 SINE Alu -2 115 30 5 1114 603 0 0 0 chr17 69423036 69423103 -25849548 + (GAA)n Simple_repeat Simple_repeat 1 67 0 5 1114 393 22 0 0 chr17 69424185 69424231 -25848420 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1114 504 0 0 0 chr17 69426245 69426301 -25846350 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1114 1353 182 139 18 chr17 69428129 69428459 -25844192 + ORR1D1 LTR MaLR 1 370 -4 5 1114 1189 239 95 22 chr17 69428922 69429289 -25843362 + L1MA5 LINE L1 5901 6294 -6 5 1114 519 60 0 0 chr17 69429701 69429768 -25842883 + (GGGA)n Simple_repeat Simple_repeat 2 68 0 5 1114 494 57 14 0 chr17 69429907 69429977 -25842674 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 5 1114 26 0 0 0 chr17 69430039 69430065 -25842586 + AT_rich Low_complexity Low_complexity 1 26 0 5 1114 297 0 0 0 chr17 69430179 69430212 -25842439 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1114 1756 137 12 69 chr17 69431332 69431802 -25840849 - RMER17C LTR ERVK -519 439 19 5 1114 963 181 0 49 chr17 69432316 69432519 -25840132 + ORR1C2 LTR MaLR 4 196 -188 5 1114 241 157 0 56 chr17 69432527 69432581 -25840070 + CT-rich Low_complexity Low_complexity 1 51 0 5 1114 207 355 64 14 chr17 69432872 69433012 -25839639 + MIRc SINE MIR 93 239 -29 5 1114 230 316 63 0 chr17 69433403 69433482 -25839169 - Tigger5 DNA MER2_type -12 2394 2311 5 1114 609 52 0 0 chr17 69434365 69434442 -25838209 + (CATATA)n Simple_repeat Simple_repeat 2 78 0 5 1114 1181 86 0 11 chr17 69434459 69434636 -25838015 + (CATATA)n Simple_repeat Simple_repeat 2 176 0 5 1114 186 133 0 0 chr17 69434643 69434673 -25837978 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 1114 414 0 0 0 chr17 69435234 69435280 -25837371 + (TATG)n Simple_repeat Simple_repeat 2 47 0 5 1114 593 274 0 0 chr17 69435308 69435454 -25837197 - RSINE1 SINE B4 -18 147 2 5 1114 787 250 54 15 chr17 69439854 69440057 -25832594 + B3 SINE B2 1 211 -5 5 1114 1332 52 34 17 chr17 69440156 69440334 -25832317 + B2_Mm2 SINE B2 1 181 -14 5 1114 251 331 89 7 chr17 69440360 69440506 -25832145 - Charlie1 DNA MER1_type -2622 159 2 5 1114 396 255 86 37 chr17 69440537 69440781 -25831870 + Lx9 LINE L1 7383 7638 -6 5 1114 273 57 0 0 chr17 69440781 69440816 -25831835 + (GGA)n Simple_repeat Simple_repeat 3 37 0 5 1114 762 11 0 0 chr17 69440838 69440925 -25831726 + (GAA)n Simple_repeat Simple_repeat 1 87 0 5 1114 317 241 276 29 chr17 69441430 69441641 -25831010 - B4 SINE B4 -5 287 25 5 1114 307 214 0 77 chr17 69442404 69442495 -25830156 - PB1D10 SINE Alu 0 117 34 5 1114 676 283 150 29 chr17 69443055 69443474 -25829177 - L1MB2 LINE L1 -36 6135 5666 5 1114 269 70 47 0 chr17 69445050 69445093 -25827558 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 5 1114 21 0 0 0 chr17 69445459 69445480 -25827171 + AT_rich Low_complexity Low_complexity 1 21 0 5 1114 365 282 6 0 chr17 69448740 69448903 -25823748 + (TG)n Simple_repeat Simple_repeat 1 164 0 5 1114 374 263 8 0 chr17 69448920 69449053 -25823598 + (TG)n Simple_repeat Simple_repeat 2 135 0 5 1114 907 290 14 51 chr17 69449066 69449342 -25823309 - B4 SINE B4 -8 284 19 5 1114 180 0 0 0 chr17 69449350 69449370 -25823281 + (CAT)n Simple_repeat Simple_repeat 1 20 0 5 1114 1094 212 9 5 chr17 69449376 69449589 -25823062 - B3 SINE B2 -2 214 1 5 1114 258 229 29 0 chr17 69449589 69449659 -25822992 - B4A SINE B4 -197 95 24 5 1114 182 105 26 0 chr17 69449773 69449811 -25822840 + (GGGA)n Simple_repeat Simple_repeat 1 39 0 5 1114 698 87 10 0 chr17 69449813 69449916 -25822735 + (GA)n Simple_repeat Simple_repeat 1 104 0 5 1114 697 206 4 8 chr17 69450631 69450877 -25821774 + (CA)n Simple_repeat Simple_repeat 1 244 0 5 1114 369 278 76 25 chr17 69451387 69451505 -25821146 - LTR16A LTR ERVL -303 148 25 5 1114 295 315 0 0 chr17 69451705 69451778 -25820873 + ID4_ SINE ID 5 77 -6 5 1114 216 318 32 0 chr17 69451921 69451984 -25820667 + ID4 SINE ID 3 67 -16 5 1114 333 0 0 0 chr17 69451987 69452024 -25820627 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1114 279 0 0 0 chr17 69452037 69452068 -25820583 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1114 21 0 0 0 chr17 69452219 69452240 -25820411 + AT_rich Low_complexity Low_complexity 1 21 0 5 1114 198 0 0 0 chr17 69453679 69453701 -25818950 + (TTTG)n Simple_repeat Simple_repeat 4 25 0 5 1114 252 258 61 0 chr17 69453713 69453779 -25818872 + B4A SINE B4 3 72 -220 5 1114 255 31 0 0 chr17 69453793 69453825 -25818826 + (TTCC)n Simple_repeat Simple_repeat 2 33 0 5 1114 225 65 0 0 chr17 69453843 69453874 -25818777 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 5 1114 264 215 0 102 chr17 69453891 69453979 -25818672 - ID_B1 SINE B4 0 224 146 5 1114 532 81 0 68 chr17 69453900 69454013 -25818638 - B1_Mus2 SINE Alu -7 143 44 5 1114 240 330 67 67 chr17 69454019 69454214 -25818437 + B4A SINE B4 74 268 -24 5 1114 209 33 33 0 chr17 69455401 69455431 -25817220 + (TC)n Simple_repeat Simple_repeat 2 32 0 5 1114 465 19 0 0 chr17 69455431 69455485 -25817166 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1114 26 50 0 0 chr17 69456121 69456161 -25816490 + AT_rich Low_complexity Low_complexity 1 40 0 5 1114 1568 199 5 101 chr17 69456333 69456747 -25815904 + ORR1D1 LTR MaLR 1 374 0 5 1114 666 254 20 50 chr17 69456962 69457161 -25815490 - B3A SINE B2 -15 201 9 5 1114 600 178 0 3 chr17 69457243 69457530 -25815121 + (TG)n Simple_repeat Simple_repeat 1 285 0 6 1114 446 264 100 13 chr17 69457614 69457764 -25814887 - B4A SINE B4 -13 279 117 6 1114 271 274 98 41 chr17 69457803 69457925 -25814726 - B4A SINE B4 -149 143 15 6 1114 331 244 158 31 chr17 69459549 69459676 -25812975 + MER5A DNA MER1_type 2 144 -45 6 1114 852 10 0 0 chr17 69460082 69460179 -25812472 + (TTC)n Simple_repeat Simple_repeat 1 97 0 6 1114 1160 116 39 6 chr17 69460932 69461114 -25811537 - B2_Mm2 SINE B2 -6 189 2 6 1114 306 237 50 30 chr17 69461167 69461267 -25811384 + B1F1 SINE Alu 15 116 -33 6 1114 274 288 41 0 chr17 69461306 69461379 -25811272 + ID4_ SINE ID 2 77 -6 6 1114 453 19 0 0 chr17 69461450 69461504 -25811147 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1114 341 312 124 6 chr17 69461820 69461981 -25810670 - LTR86B1 LTR ERVL -20 473 294 6 1114 846 304 19 64 chr17 69462751 69463124 -25809527 + MLT1A0 LTR MaLR 4 359 -6 6 1114 772 146 11 17 chr17 69463226 69463407 -25809244 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 6 1114 452 285 216 57 chr17 69463536 69463923 -25808728 - L1MD2 LINE L1 -229 6130 5674 6 1114 270 0 0 0 chr17 69463923 69463953 -25808698 + (TG)n Simple_repeat Simple_repeat 2 31 0 6 1114 452 285 216 57 chr17 69463953 69464157 -25808494 - L1MD2 LINE L1 -686 5673 5445 6 1114 221 321 59 47 chr17 69464186 69464271 -25808380 - B4 SINE B4 -203 89 4 6 1114 1170 74 0 0 chr17 69464592 69464740 -25807911 + B1_Mus1 SINE Alu 1 148 0 6 1114 360 0 0 0 chr17 69465539 69465579 -25807072 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 6 1114 2811 82 60 5 chr17 69465861 69466243 -25806408 - Lx3C LINE L1 -187 6789 6387 6 1114 619 228 47 41 chr17 69467037 69467206 -25805445 + B3A SINE B2 2 171 -27 6 1114 378 0 0 0 chr17 69467236 69467278 -25805373 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 139 384 241 97 18 chr17 69468093 69468207 -25804444 + B4 SINE B4 10 132 -160 6 1115 1260 34 0 13 chr17 69469396 69469546 -25803105 + B1_Mus1 SINE Alu 1 148 0 6 1115 243 0 0 0 chr17 69469548 69469575 -25803076 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1115 417 123 0 0 chr17 69471545 69471610 -25801041 + (TG)n Simple_repeat Simple_repeat 2 66 0 6 1115 893 184 36 132 chr17 69471615 69471971 -25800680 - RLTRETN_Mm LTR ERVK 0 409 1 6 1115 318 227 0 0 chr17 69471975 69472050 -25800601 + (TATG)n Simple_repeat Simple_repeat 4 78 0 6 1115 68 34 0 0 chr17 69472734 69472823 -25799828 + AT_rich Low_complexity Low_complexity 1 89 0 6 1115 408 179 0 0 chr17 69472921 69472999 -25799652 + (TA)n Simple_repeat Simple_repeat 2 79 0 6 1115 214 367 0 0 chr17 69473385 69473505 -25799146 + (TA)n Simple_repeat Simple_repeat 2 121 0 6 1115 839 144 13 33 chr17 69473615 69473766 -25798885 - ORR1A2 LTR MaLR -20 307 160 6 1115 228 213 0 0 chr17 69473822 69473883 -25798768 + (TATG)n Simple_repeat Simple_repeat 2 62 0 6 1115 454 263 85 28 chr17 69474190 69474331 -25798320 + RSINE1 SINE B4 17 165 0 6 1115 239 246 0 32 chr17 69474339 69474402 -25798249 + (CATA)n Simple_repeat Simple_repeat 4 64 0 6 1115 387 0 0 0 chr17 69478031 69478074 -25794577 + (TC)n Simple_repeat Simple_repeat 2 44 0 6 1115 355 300 9 9 chr17 69479540 69479651 -25793000 + RSINE1 SINE B4 14 124 -41 6 1115 316 59 0 38 chr17 69479737 69479790 -25792861 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1115 302 330 60 17 chr17 69479798 69479915 -25792736 + ID_B1 SINE B4 74 195 -29 6 1115 198 0 0 0 chr17 69479938 69479960 -25792691 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 6 1115 497 309 90 0 chr17 69481183 69481371 -25791280 - ID_B1 SINE B4 -17 207 3 6 1115 310 310 35 9 chr17 69481470 69481584 -25791067 - PB1D10 SINE Alu 0 117 1 6 1115 240 340 53 65 chr17 69482113 69482340 -25790311 - Charlie2b DNA MER1_type -42 2740 2503 6 1115 1217 55 0 0 chr17 69482340 69482486 -25790165 - B1_Mus2 SINE Alu 0 147 2 6 1115 240 340 53 65 chr17 69482486 69482655 -25789996 - Charlie2b DNA MER1_type -280 2502 2349 6 1115 333 253 0 48 chr17 69483015 69483098 -25789553 + ORR1D2 LTR MaLR 72 150 -220 6 1115 4703 130 27 1 chr17 69483219 69483950 -25788701 + L1_Mm LINE L1 5051 5800 -83 6 1115 2058 61 4 8 chr17 69483949 69484215 -25788436 + L1_Mus2 LINE L1 6297 6561 -5 6 1115 5842 89 36 1 chr17 69484215 69485040 -25787611 + L1_Mus4 LINE L1 5783 6636 0 6 1115 371 272 159 0 chr17 69485080 69485275 -25787376 + L1MA5 LINE L1 6071 6296 -4 6 1115 551 85 0 12 chr17 69486057 69486140 -25786511 + (CTA)n Simple_repeat Simple_repeat 2 83 0 6 1115 383 246 16 25 chr17 69486146 69486267 -25786384 + MLT1A1 LTR MaLR 287 406 -2 6 1115 740 267 137 27 chr17 69486559 69486998 -25785653 - L1MD3 LINE L1 -85 7910 7424 6 1115 307 293 53 0 chr17 69487094 69487227 -25785424 - L1MD3 LINE L1 -680 7202 7063 6 1115 343 301 0 31 chr17 69487518 69487614 -25785037 + PB1D10 SINE Alu 19 111 -6 6 1115 207 218 18 0 chr17 69488607 69488662 -25783989 + (TAGA)n Simple_repeat Simple_repeat 2 57 0 6 1115 366 205 0 0 chr17 69488662 69488740 -25783911 + (TA)n Simple_repeat Simple_repeat 1 78 0 6 1115 734 128 41 0 chr17 69488791 69488963 -25783688 + (TAGA)n Simple_repeat Simple_repeat 1 179 0 6 1115 280 312 92 23 chr17 69489026 69489157 -25783494 + B1F2 SINE Alu 5 144 -5 6 1115 1755 179 26 14 chr17 69490141 69490487 -25782164 - ORR1D1 LTR MaLR 0 374 25 6 1115 1684 146 15 160 chr17 69490687 69491077 -25781574 - RMER17C LTR ERVK 0 410 92 6 1115 522 31 0 0 chr17 69491077 69491141 -25781510 + (GA)n Simple_repeat Simple_repeat 2 65 0 6 1115 1684 146 15 160 chr17 69491141 69491230 -25781421 - RMER17C LTR ERVK -319 91 2 6 1115 622 308 35 41 chr17 69491744 69492059 -25780592 - MER2 DNA MER2_type -13 332 20 6 1115 310 325 48 67 chr17 69492064 69492389 -25780262 - ORR1E LTR MaLR -1 378 37 6 1115 189 70 22 65 chr17 69492885 69492931 -25779720 + (TTG)n Simple_repeat Simple_repeat 2 45 0 6 1115 288 0 0 0 chr17 69493033 69493065 -25779586 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 6 1115 657 0 0 0 chr17 69493068 69493141 -25779510 + (GGAGA)n Simple_repeat Simple_repeat 2 74 0 6 1115 699 146 6 31 chr17 69493145 69493308 -25779343 + GA-rich Low_complexity Low_complexity 4 162 0 6 1115 227 37 0 0 chr17 69493308 69493335 -25779316 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 6 1115 950 107 13 0 chr17 69493335 69493484 -25779167 + (GAAA)n Simple_repeat Simple_repeat 4 154 0 6 1115 310 314 129 0 chr17 69493579 69493703 -25778948 + B1F1 SINE Alu 2 141 -8 6 1115 1445 68 16 0 chr17 69494156 69494346 -25778305 - B2_Mm1t SINE B2 0 193 1 6 1115 600 150 0 0 chr17 69494775 69494888 -25777763 + (TCCTG)n Simple_repeat Simple_repeat 4 116 0 6 1115 1577 220 66 18 chr17 69495643 69496036 -25776615 - MTC LTR MaLR 0 421 10 6 1115 377 296 139 4 chr17 69496999 69497088 -25775563 + MER44A DNA MER2_type 2 99 -240 6 1115 441 0 0 0 chr17 69497088 69497137 -25775514 + (GA)n Simple_repeat Simple_repeat 1 49 0 6 1115 377 296 139 4 chr17 69497137 69497298 -25775353 + MER44A DNA MER2_type 100 286 -53 6 1115 351 150 0 0 chr17 69497521 69497581 -25775070 + (TCCA)n Simple_repeat Simple_repeat 3 62 0 6 1115 1061 272 83 6 chr17 69497707 69498055 -25774596 - MTEb LTR MaLR -4 375 1 6 1115 612 94 9 19 chr17 69499328 69499436 -25773215 + (TG)n Simple_repeat Simple_repeat 2 108 0 6 1115 737 136 19 7 chr17 69499843 69499998 -25772653 + (TG)n Simple_repeat Simple_repeat 2 158 0 6 1115 594 82 10 20 chr17 69500007 69500107 -25772544 + (TG)n Simple_repeat Simple_repeat 1 99 0 1 1115 207 0 0 0 chr17 69500159 69500182 -25772469 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 1115 918 276 69 32 chr17 69503001 69503248 -25769403 - B4 SINE B4 0 292 41 2 1115 4307 23 0 2 chr17 69503248 69503731 -25768920 - LTRIS_Mm LTR ERV1 0 482 1 3 1115 918 276 69 32 chr17 69503731 69503760 -25768891 - B4 SINE B4 -252 40 6 2 1115 664 247 42 57 chr17 69504221 69504414 -25768237 - ID_B1 SINE B4 -33 191 2 4 1115 22 0 0 0 chr17 69504595 69504617 -25768034 + AT_rich Low_complexity Low_complexity 1 22 0 5 1115 243 146 0 0 chr17 69504764 69504805 -25767846 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1115 180 0 0 0 chr17 69505514 69505534 -25767117 + (TC)n Simple_repeat Simple_repeat 1 20 0 7 1115 570 29 0 0 chr17 69505775 69505843 -25766808 + (GA)n Simple_repeat Simple_repeat 2 69 0 8 1115 21 0 0 0 chr17 69506568 69506589 -25766062 + GC_rich Low_complexity Low_complexity 1 21 0 9 1115 693 0 0 0 chr17 69507614 69507691 -25764960 + (GGA)n Simple_repeat Simple_repeat 1 77 0 1 1115 786 162 196 27 chr17 69508308 69508492 -25764159 + B3 SINE B2 2 216 0 1 1115 946 134 11 28 chr17 69508668 69508844 -25763807 - Lx LINE L1 0 6654 6482 1 1115 324 0 0 0 chr17 69510380 69510416 -25762235 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1115 345 24 0 0 chr17 69511005 69511047 -25761604 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1115 214 283 50 0 chr17 69511055 69511154 -25761497 + (TA)n Simple_repeat Simple_repeat 2 105 0 1 1115 252 336 111 22 chr17 69511291 69511516 -25761135 + Kanga1 DNA Tc2 1303 1547 -198 1 1115 548 272 82 73 chr17 69511669 69512010 -25760641 - ORR1E LTR MaLR -12 347 4 1 1115 811 158 174 5 chr17 69512039 69512223 -25760428 - B3 SINE B2 0 216 2 1 1115 471 18 0 0 chr17 69512264 69512320 -25760331 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1115 342 0 0 0 chr17 69512750 69512788 -25759863 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1115 3098 61 2 15 chr17 69513397 69513798 -25758853 + MTA_Mm LTR MaLR 1 396 0 2 1115 203 133 44 0 chr17 69514467 69514512 -25758139 + (TAA)n Simple_repeat Simple_repeat 1 47 0 2 1115 288 326 59 53 chr17 69514989 69515141 -25757510 - ORR1E LTR MaLR -187 172 20 2 1115 402 134 39 39 chr17 69517362 69517541 -25755110 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 2 1115 777 251 166 24 chr17 69517560 69517813 -25754838 + B4A SINE B4 1 289 -3 2 1115 399 227 0 0 chr17 69519611 69519708 -25752943 + (TA)n Simple_repeat Simple_repeat 1 97 0 2 1115 339 89 0 0 chr17 69519707 69519763 -25752888 + (GA)n Simple_repeat Simple_repeat 2 57 0 2 1115 1218 61 0 0 chr17 69521225 69521373 -25751278 + B1_Mus1 SINE Alu 1 148 0 2 1115 349 266 34 68 chr17 69521999 69522054 -25750597 + RSINE1 SINE B4 49 104 -61 2 1115 1716 107 195 0 chr17 69522054 69522326 -25750325 - ORR1A2 LTR MaLR -2 325 1 3 1115 349 266 34 68 chr17 69522326 69522387 -25750264 + RSINE1 SINE B4 105 161 -4 2 1115 23 0 0 0 chr17 69522495 69522518 -25750133 + AT_rich Low_complexity Low_complexity 1 23 0 3 1115 540 318 15 35 chr17 69523047 69523249 -25749402 - B3A SINE B2 0 198 1 3 1115 372 359 30 42 chr17 69523374 69523540 -25749111 - RSINE1 SINE B4 0 165 2 3 1115 205 345 103 8 chr17 69523561 69523678 -25748973 - L2a LINE L2 0 3426 3299 3 1115 222 360 67 17 chr17 69523712 69523847 -25748804 - MIRb SINE MIR -108 160 16 3 1115 369 109 0 0 chr17 69524027 69524082 -25748569 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1115 209 193 0 34 chr17 69524500 69524542 -25748109 + T-rich Low_complexity Low_complexity 18 57 0 3 1115 1255 34 7 0 chr17 69524542 69524688 -25747963 - B1_Mus2 SINE Alu 0 147 1 3 1115 209 193 0 34 chr17 69524688 69524704 -25747947 + T-rich Low_complexity Low_complexity 2 17 0 3 1115 456 19 0 0 chr17 69524787 69524840 -25747811 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 4 1115 403 145 12 12 chr17 69525208 69525292 -25747359 + (TA)n Simple_repeat Simple_repeat 2 85 0 4 1115 757 188 154 32 chr17 69525387 69525679 -25746972 - ORR1D1 LTR MaLR -8 366 1 4 1115 433 289 0 8 chr17 69528349 69528369 -25744282 + polypyrimidine Low_complexity Low_complexity 110 129 0 4 1115 1113 98 0 0 chr17 69528369 69528543 -25744108 + (TCC)n Simple_repeat Simple_repeat 2 175 0 4 1115 524 210 7 34 chr17 69528543 69528841 -25743810 + CT-rich Low_complexity Low_complexity 1 290 0 4 1115 621 189 337 0 chr17 69529520 69529689 -25742962 + URR1A DNA MER1_type 1 226 0 4 1115 186 43 0 0 chr17 69531543 69531566 -25741085 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1115 457 258 132 18 chr17 69532847 69533013 -25739638 + Lx8 LINE L1 7148 7332 -141 4 1115 262 327 112 65 chr17 69533213 69533445 -25739206 - MIR SINE MIR 0 262 20 4 1115 5046 67 7 15 chr17 69534059 69534731 -25737920 - L1Md_F2 LINE L1 -1 6581 5915 5 1115 433 311 0 22 chr17 69535444 69535579 -25737072 - MER2 DNA MER2_type -47 298 167 5 1115 351 0 0 0 chr17 69536162 69536201 -25736450 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1115 219 301 92 55 chr17 69537594 69537703 -25734948 - MIRb SINE MIR -106 162 50 5 1115 538 300 93 67 chr17 69539353 69539593 -25733058 + B4A SINE B4 18 271 -21 5 1115 180 0 0 0 chr17 69539593 69539613 -25733038 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 1115 538 300 93 67 chr17 69539613 69539640 -25733011 + B4A SINE B4 272 292 0 5 1115 1242 271 98 27 chr17 69539754 69540205 -25732446 - RMER5 LTR ERV1 -8 526 44 5 1115 31 102 0 0 chr17 69540339 69540447 -25732204 + AT_rich Low_complexity Low_complexity 1 108 0 5 1115 1105 182 40 38 chr17 69542566 69543078 -25729573 + RMER17C LTR ERVK 1 409 -1 5 1115 200 97 0 31 chr17 69545068 69545100 -25727551 + (CACCC)n Simple_repeat Simple_repeat 3 33 0 5 1115 528 287 70 23 chr17 69545778 69545992 -25726659 + RLTR16 LTR ERVK 1 224 -281 6 1115 432 0 0 0 chr17 69547920 69547968 -25724683 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 1115 465 19 0 0 chr17 69549593 69549647 -25723004 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1115 378 0 0 0 chr17 69549647 69549688 -25722963 + (GA)n Simple_repeat Simple_repeat 1 42 0 6 1115 2216 191 7 12 chr17 69550061 69550469 -25722182 - MTC LTR MaLR -13 408 3 6 1115 846 323 24 12 chr17 69550717 69550968 -25721683 - B4A SINE B4 -7 285 32 6 1115 1268 103 0 21 chr17 69551085 69551273 -25721378 + B2_Mm2 SINE B2 1 184 -11 6 1115 325 296 116 58 chr17 69551521 69551548 -25721103 - B3 SINE B2 -13 203 3 6 1115 818 272 0 6 chr17 69551548 69551711 -25720940 - RSINE1 SINE B4 0 165 4 6 1115 1346 298 81 33 chr17 69553902 69554484 -25718167 - Lx8 LINE L1 -164 7309 6700 6 1115 1753 218 67 70 chr17 69555380 69555934 -25716717 - RLTR31_Mur LTR ERVK -1 552 1 7 1115 192 279 0 0 chr17 69556002 69556045 -25716606 - MIR3 SINE MIR -53 155 113 7 1115 180 0 0 0 chr17 69556536 69556556 -25716095 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 7 1115 1795 141 74 61 chr17 69556617 69556995 -25715656 - MTC LTR MaLR 0 421 39 7 1115 210 91 0 0 chr17 69557940 69557973 -25714678 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 7 1115 3207 55 8 2 chr17 69558772 69559170 -25713481 + MTB LTR MaLR 1 400 0 7 1115 261 83 0 0 chr17 69559962 69559998 -25712653 - U2 snRNA snRNA -152 36 1 7 1115 273 119 0 0 chr17 69560150 69560192 -25712459 + (T)n Simple_repeat Simple_repeat 1 42 0 7 1115 1325 95 15 26 chr17 69560330 69560525 -25712126 - B2_Mm2 SINE B2 -1 194 2 7 1115 468 278 109 43 chr17 69560551 69560735 -25711916 - B3A SINE B2 -2 196 1 7 1115 2047 120 15 21 chr17 69561389 69561432 -25711219 - ORR1A1 LTR MaLR -8 338 301 8 1115 3133 29 58 0 chr17 69561432 69561808 -25710843 - L1Md_T LINE L1 0 6582 6185 8 1115 2047 120 15 21 chr17 69561808 69562104 -25710547 - ORR1A1 LTR MaLR -46 300 1 8 1115 28 48 0 0 chr17 69562314 69562356 -25710295 + AT_rich Low_complexity Low_complexity 1 42 0 8 1115 181 140 23 23 chr17 69562409 69562453 -25710198 + CT-rich Low_complexity Low_complexity 5 48 0 8 1115 3765 253 32 30 chr17 69562528 69563505 -25709146 - Lx7 LINE L1 -318 7378 6400 8 1115 902 207 110 123 chr17 69563585 69563966 -25708685 - L1_Mur3 LINE L1 -630 5250 4875 8 1115 243 250 0 0 chr17 69564944 69564992 -25707659 + (CA)n Simple_repeat Simple_repeat 2 49 0 8 1115 988 92 43 0 chr17 69565315 69565456 -25707195 + B1_Mus1 SINE Alu 1 147 -1 8 1115 213 294 0 0 chr17 69567518 69567586 -25705065 + (TATATG)n Simple_repeat Simple_repeat 4 71 0 8 1115 248 250 27 40 chr17 69567620 69567695 -25704956 - B4 SINE B4 -200 92 19 8 1115 23 0 0 0 chr17 69567779 69567802 -25704849 + GC_rich Low_complexity Low_complexity 1 23 0 9 1115 962 232 52 52 chr17 69569123 69569414 -25703237 + B4A SINE B4 1 291 -1 9 1115 1367 101 37 0 chr17 69569505 69569693 -25702958 - B2_Mm2 SINE B2 0 195 1 9 1115 420 284 168 17 chr17 69571553 69571732 -25700919 - B4 SINE B4 -86 206 1 9 1115 183 211 0 0 chr17 69572127 69572165 -25700486 + L2a LINE L2 3132 3169 -257 9 1115 423 0 0 0 chr17 69572462 69572509 -25700142 + (TA)n Simple_repeat Simple_repeat 2 48 0 9 1115 1123 227 116 55 chr17 69575118 69575594 -25697057 - RLTR16 LTR ERVK 0 505 1 9 1115 492 32 0 0 chr17 69577767 69577829 -25694822 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 9 1115 186 71 0 0 chr17 69580033 69580061 -25692590 + (T)n Simple_repeat Simple_repeat 1 28 0 9 1115 268 349 22 37 chr17 69580312 69580446 -25692205 - MIRb SINE MIR -92 176 45 9 1115 515 257 0 15 chr17 69581828 69582099 -25690552 + (TTG)n Simple_repeat Simple_repeat 1 266 0 1 1115 208 305 0 0 chr17 69582120 69582179 -25690472 + (TTG)n Simple_repeat Simple_repeat 3 61 0 1 1115 1149 81 14 0 chr17 69582747 69582895 -25689756 + B1_Mur4 SINE Alu 1 150 0 1 1115 292 205 0 43 chr17 69582999 69583091 -25689560 + (TATATG)n Simple_repeat Simple_repeat 2 89 0 1 1115 1136 271 95 6 chr17 69583144 69583471 -25689180 - MTEb LTR MaLR -8 371 16 1 1115 927 258 60 30 chr17 69583640 69583908 -25688743 + ORR1E LTR MaLR 84 359 0 1 1115 999 48 204 33 chr17 69584719 69584871 -25687780 + B2_Mm1a SINE B2 1 178 -15 1 1115 429 20 0 0 chr17 69584871 69584921 -25687730 + (GAAA)n Simple_repeat Simple_repeat 3 52 0 1 1115 516 170 0 22 chr17 69586198 69586336 -25686315 + (TG)n Simple_repeat Simple_repeat 2 136 0 1 1115 387 274 6 47 chr17 69586343 69586515 -25686136 + (TATATG)n Simple_repeat Simple_repeat 6 170 0 1 1115 516 193 12 20 chr17 69586518 69586772 -25685879 + (TG)n Simple_repeat Simple_repeat 1 251 0 1 1115 350 255 130 19 chr17 69586910 69587018 -25685633 - MTE2a LTR MaLR -2 377 258 1 1115 393 333 28 50 chr17 69587201 69587381 -25685270 - MTE2a LTR MaLR -164 215 40 1 1115 235 336 0 28 chr17 69587352 69587459 -25685192 - MTEa LTR MaLR -275 104 1 1 1115 330 318 47 16 chr17 69587459 69587580 -25685071 - B4A SINE B4 -81 211 87 1 1115 264 267 22 43 chr17 69588346 69588530 -25684121 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1115 435 236 26 35 chr17 69589563 69589677 -25682974 + PB1D10 SINE Alu 2 114 -3 1 1115 447 158 73 0 chr17 69590359 69590524 -25682127 + CT-rich Low_complexity Low_complexity 2 178 0 1 1115 221 339 0 0 chr17 69590524 69590580 -25682071 + C-rich Low_complexity Low_complexity 5 60 0 1 1115 2817 65 0 3 chr17 69591315 69591669 -25680982 - Lx3_Mus LINE L1 0 7009 6657 1 1115 216 86 0 0 chr17 69593374 69593409 -25679242 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 1115 464 276 101 41 chr17 69593622 69593841 -25678810 - MLT1A0 LTR MaLR -108 257 26 1 1115 3984 68 0 2 chr17 69594983 69595482 -25677169 - L1Md_F2 LINE L1 -498 6084 5587 1 1115 3607 88 22 6 chr17 69595485 69595985 -25676666 + L1Md_F2 LINE L1 6074 6581 -1 1 1115 1131 105 6 0 chr17 69595990 69596161 -25676490 + B2_Mm2 SINE B2 2 173 -22 1 1115 1059 88 0 0 chr17 69596166 69596314 -25676337 + (GAAA)n Simple_repeat Simple_repeat 3 150 0 1 1115 219 36 0 0 chr17 69597209 69597237 -25675414 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 1115 244 280 13 0 chr17 69597338 69597413 -25675238 - MER46C DNA MER2_type -10 328 253 1 1115 1210 42 7 0 chr17 69597558 69597702 -25674949 + B1_Mus2 SINE Alu 2 146 -1 1 1115 222 37 0 0 chr17 69598467 69598494 -25674157 + (TCTG)n Simple_repeat Simple_repeat 1 27 0 1 1116 423 0 0 0 chr17 69599665 69599712 -25672939 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 1116 1308 62 0 0 chr17 69600500 69600679 -25671972 + (TG)n Simple_repeat Simple_repeat 2 180 0 1 1116 229 345 11 0 chr17 69600762 69600849 -25671802 + PB1D10 SINE Alu 11 98 -19 1 1116 369 215 0 0 chr17 69602395 69602488 -25670163 + (TG)n Simple_repeat Simple_repeat 2 94 0 1 1116 1039 204 5 14 chr17 69603623 69603832 -25668819 + B3 SINE B2 3 209 -7 1 1116 21 0 0 0 chr17 69603883 69603904 -25668747 + AT_rich Low_complexity Low_complexity 1 21 0 1 1116 2559 70 3 3 chr17 69604478 69604805 -25667846 - ORR1A2 LTR MaLR 0 327 1 1 1116 242 170 0 21 chr17 69605484 69605532 -25667119 + L1MA6 LINE L1 6238 6284 -16 1 1116 780 107 0 0 chr17 69606987 69607108 -25665543 + (TG)n Simple_repeat Simple_repeat 2 122 0 1 1116 232 301 57 121 chr17 69607119 69607384 -25665267 - B4 SINE B4 -20 272 25 1 1116 789 169 0 22 chr17 69607646 69607828 -25664823 + (TATG)n Simple_repeat Simple_repeat 1 178 0 1 1116 381 206 0 0 chr17 69607841 69607938 -25664713 + (TG)n Simple_repeat Simple_repeat 2 98 0 1 1116 506 245 11 197 chr17 69607938 69608126 -25664525 - ID_B1 SINE B4 -67 157 5 1 1116 350 42 21 0 chr17 69611830 69611878 -25660773 + (TTA)n Simple_repeat Simple_repeat 2 50 0 1 1116 262 312 0 0 chr17 69612757 69612834 -25659817 + ID4_ SINE ID 5 81 -2 1 1116 552 116 0 0 chr17 69614000 69614086 -25658565 + (CA)n Simple_repeat Simple_repeat 2 87 0 1 1116 1243 48 0 0 chr17 69614116 69614263 -25658388 + B1_Mus2 SINE Alu 1 147 0 1 1116 189 0 0 0 chr17 69614821 69614842 -25657809 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1116 200 327 9 27 chr17 69615573 69615683 -25656968 + CT-rich Low_complexity Low_complexity 3 110 0 1 1116 1206 48 0 0 chr17 69618794 69618941 -25653710 + B1_Mus2 SINE Alu 1 147 0 1 1116 234 0 0 0 chr17 69618941 69618967 -25653684 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1116 988 94 63 0 chr17 69620126 69620285 -25652366 - B2_Mm2 SINE B2 -6 189 21 1 1116 243 293 90 10 chr17 69620377 69620477 -25652174 - MER5A DNA MER1_type -81 108 1 1 1116 201 39 0 0 chr17 69621252 69621278 -25651373 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 1 1116 284 214 128 23 chr17 69621886 69621972 -25650679 + PB1D10 SINE Alu 23 117 0 1 1116 24 0 0 0 chr17 69622260 69622284 -25650367 + AT_rich Low_complexity Low_complexity 1 24 0 1 1116 1326 161 5 0 chr17 69622484 69622695 -25649956 + B3 SINE B2 1 212 -4 1 1116 288 158 0 0 chr17 69623726 69623802 -25648849 + T-rich Low_complexity Low_complexity 1 76 0 1 1116 270 0 0 0 chr17 69623945 69623975 -25648676 + (A)n Simple_repeat Simple_repeat 1 30 0 1 1116 23 33 0 0 chr17 69624711 69624741 -25647910 + AT_rich Low_complexity Low_complexity 1 30 0 1 1116 275 337 11 0 chr17 69625436 69625528 -25647123 + B4A SINE B4 9 101 -191 1 1116 3048 68 19 5 chr17 69626316 69626731 -25645920 - BGLII LTR ERVK 0 421 1 1 1116 25 0 0 0 chr17 69627239 69627264 -25645387 + AT_rich Low_complexity Low_complexity 1 25 0 1 1116 942 264 125 20 chr17 69629561 69629913 -25642738 - MTD LTR MaLR -30 389 1 1 1116 432 0 0 0 chr17 69632771 69632819 -25639832 + (T)n Simple_repeat Simple_repeat 1 48 0 1 1116 369 0 0 0 chr17 69633419 69633460 -25639191 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1116 506 273 12 47 chr17 69634544 69634713 -25637938 + RSINE1 SINE B4 3 165 0 1 1116 240 250 0 0 chr17 69634714 69634762 -25637889 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1116 306 87 0 0 chr17 69635543 69635589 -25637062 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1116 313 336 7 7 chr17 69635722 69635869 -25636782 - MER2 DNA MER2_type -63 282 136 1 1116 180 228 0 0 chr17 69639044 69639101 -25633550 + T-rich Low_complexity Low_complexity 1 57 0 1 1116 891 71 8 0 chr17 69639398 69639524 -25633127 + B1_Mus1 SINE Alu 22 148 0 1 1116 831 248 18 51 chr17 69639970 69640012 -25632639 + B3 SINE B2 1 36 -180 1 1116 3348 58 0 0 chr17 69640012 69640412 -25632239 - MTB LTR MaLR 0 400 1 1 1116 831 248 18 51 chr17 69640412 69640586 -25632065 + B3 SINE B2 37 210 -6 1 1116 333 327 9 0 chr17 69640594 69640701 -25631950 + B4 SINE B4 84 191 -101 1 1116 1024 115 6 0 chr17 69640786 69640942 -25631709 + B2_Mm1t SINE B2 11 167 -26 1 1116 2545 175 17 29 chr17 69640947 69641466 -25631185 - RMER20A LTR ERVK -3 513 1 1 1116 639 71 0 0 chr17 69641554 69641639 -25631012 + (GA)n Simple_repeat Simple_repeat 1 85 0 1 1116 779 186 112 21 chr17 69642422 69642609 -25630042 + B3 SINE B2 13 216 0 1 1116 2090 129 0 0 chr17 69642817 69643135 -25629516 + ORR1A3 LTR MaLR 1 318 -8 1 1116 195 42 0 0 chr17 69644200 69644224 -25628427 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1 1116 1327 310 82 24 chr17 69644641 69645223 -25627428 - Lx8 LINE L1 -350 7123 6508 1 1116 326 235 12 12 chr17 69645455 69645541 -25627110 - PB1D10 SINE Alu 0 117 32 1 1116 2089 67 27 3 chr17 69645991 69646292 -25626359 - IAPLTR2b LTR ERVK -19 308 1 1 1116 241 214 63 8 chr17 69646400 69646494 -25626157 + (CAG)n Simple_repeat Simple_repeat 1 100 0 1 1116 7773 87 8 11 chr17 69646494 69647520 -25625131 + RLTR13D5 LTR ERVK 1 1023 0 1 1116 241 214 63 8 chr17 69647520 69647552 -25625099 + (CAG)n Simple_repeat Simple_repeat 2 35 0 1 1116 254 210 67 0 chr17 69647617 69647786 -25624865 + (CAG)n Simple_repeat Simple_repeat 1 180 0 1 1116 315 201 67 0 chr17 69647814 69647948 -25624703 + (CAG)n Simple_repeat Simple_repeat 1 143 0 1 1116 369 204 68 0 chr17 69648355 69648517 -25624134 + (CAG)n Simple_repeat Simple_repeat 1 173 0 1 1116 294 274 105 9 chr17 69648818 69648932 -25623719 - MTEa LTR MaLR -6 373 249 1 1116 1476 247 42 22 chr17 69649520 69649880 -25622771 - ORR1D2 LTR MaLR -3 367 1 1 1116 234 189 19 0 chr17 69649915 69649968 -25622683 - MTEa LTR MaLR -157 227 174 1 1116 369 0 0 0 chr17 69650392 69650433 -25622218 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1116 25 31 0 0 chr17 69651903 69651935 -25620716 + AT_rich Low_complexity Low_complexity 1 32 0 1 1116 261 0 0 0 chr17 69651935 69651964 -25620687 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1116 1608 230 78 32 chr17 69654094 69654340 -25618311 + MT2A LTR ERVL 13 272 -261 1 1116 1089 44 73 0 chr17 69654340 69654477 -25618174 + B1_Mm SINE Alu 1 147 0 1 1116 1608 230 78 32 chr17 69654477 69654728 -25617923 + MT2A LTR ERVL 273 533 0 1 1116 395 265 69 41 chr17 69655221 69655536 -25617115 - RLTR15 LTR ERVK -15 344 48 1 1116 3298 46 5 5 chr17 69655536 69655932 -25616719 - MTA_Mm LTR MaLR 0 396 1 1 1116 363 320 68 34 chr17 69655932 69656072 -25616579 - RLTR15 LTR ERVK -376 152 6 1 1116 546 220 76 180 chr17 69660176 69660529 -25612122 - MTE2a LTR MaLR 0 379 61 1 1116 2175 109 14 46 chr17 69660797 69661144 -25611507 + Lx3B LINE L1 6637 6972 -1 1 1116 250 234 0 0 chr17 69661263 69661310 -25611341 + B3 SINE B2 104 150 -66 1 1116 239 208 96 72 chr17 69661831 69661914 -25610737 - L2a LINE L2 -90 3336 3252 1 1116 1333 84 17 0 chr17 69662618 69662796 -25609855 + B2_Mm2 SINE B2 1 181 -14 1 1116 1188 27 0 0 chr17 69663104 69663253 -25609398 + B2_Mm2 SINE B2 2 150 -45 2 1116 225 0 0 0 chr17 69663254 69663279 -25609372 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1116 1000 222 123 0 chr17 69663754 69663997 -25608654 + RMER1B Other Other 596 868 -198 2 1116 2400 190 70 36 chr17 69664328 69664918 -25607733 + RMER1C Other Other 731 1340 -2 2 1116 522 295 0 0 chr17 69664947 69665076 -25607575 - MLT1A0 LTR MaLR -3 362 234 2 1116 899 65 8 0 chr17 69665104 69665227 -25607424 + (TTTC)n Simple_repeat Simple_repeat 2 125 0 2 1116 243 0 0 0 chr17 69665227 69665254 -25607397 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1116 424 200 19 0 chr17 69665446 69665551 -25607100 + GA-rich Low_complexity Low_complexity 1 107 0 2 1116 1496 236 112 36 chr17 69666406 69666933 -25605718 + RMER2 LTR ERV1 1 567 0 2 1116 679 269 6 6 chr17 69667427 69667588 -25605063 + RSINE1 SINE B4 3 163 -2 2 1116 1073 36 64 21 chr17 69668753 69668894 -25603757 + B1_Mus2 SINE Alu 1 147 0 2 1116 345 280 144 0 chr17 69669253 69669378 -25603273 + B1_Mur2 SINE Alu 2 144 -5 2 1116 210 186 0 23 chr17 69669378 69669422 -25603229 + (CATA)n Simple_repeat Simple_repeat 2 44 0 2 1116 335 222 12 24 chr17 69669538 69669621 -25603030 + Tigger5 DNA MER2_type 47 128 -2278 2 1116 508 347 66 9 chr17 69670006 69670323 -25602328 - MLT1C LTR MaLR -113 354 20 2 1116 740 218 78 39 chr17 69670566 69670771 -25601880 + B3 SINE B2 1 213 -3 2 1116 454 231 20 27 chr17 69671738 69671885 -25600766 - L1M2 LINE L1 -840 5303 5158 2 1116 1139 192 0 27 chr17 69672023 69672241 -25600410 - RMER6D LTR ERVK 0 720 509 2 1116 1823 105 18 4 chr17 69672241 69672518 -25600133 + RLTR13C1 LTR ERVK 1 281 -702 2 1116 2128 28 0 0 chr17 69672518 69672769 -25599882 + L1Md_Gf LINE L1 73 323 -6199 2 1116 36961 36 2 0 chr17 69672762 69679684 -25592967 + L1Md_Gf LINE L1 1 5680 -206 2 1116 3171 6 43 0 chr17 69679684 69680036 -25592615 + IAPLTR1_Mm LTR ERVK 1 367 0 2 1116 56859 21 16 2 chr17 69680036 69686418 -25586233 + IAPEz-int LTR ERVK 8 6478 -3 2 1116 3182 3 43 0 chr17 69686422 69686774 -25585877 + IAPLTR1_Mm LTR ERVK 1 367 0 2 1116 8315 7 1 0 chr17 69686774 69687713 -25584938 + L1Md_T LINE L1 5672 6582 0 2 1116 4534 73 77 4 chr17 69687713 69687792 -25584859 + RLTR13C1 LTR ERVK 258 336 -647 2 1116 420 20 0 0 chr17 69687792 69687841 -25584810 + (GA)n Simple_repeat Simple_repeat 2 50 0 2 1116 4534 73 77 4 chr17 69687841 69688438 -25584213 + RLTR13C1 LTR ERVK 337 981 -2 2 1116 2636 139 52 20 chr17 69688438 69688936 -25583715 - RMER6D LTR ERVK -206 514 1 2 1116 338 91 18 0 chr17 69689236 69689291 -25583360 + (TC)n Simple_repeat Simple_repeat 1 56 0 2 1116 423 221 8 34 chr17 69689293 69689410 -25583241 - PB1 SINE Alu -7 110 9 2 1116 341 164 0 0 chr17 69689744 69689799 -25582852 - B2_Mm2 SINE B2 -139 56 2 2 1116 369 0 0 0 chr17 69690106 69690147 -25582504 + (TAAAA)n Simple_repeat Simple_repeat 4 44 0 2 1116 29 0 0 0 chr17 69690301 69690330 -25582321 + AT_rich Low_complexity Low_complexity 1 29 0 2 1116 228 325 0 11 chr17 69690421 69690508 -25582143 + Kanga1b DNA Tc2 1 86 -693 2 1116 3374 26 18 0 chr17 69691075 69691463 -25581188 + MTA_Mm LTR MaLR 1 395 -1 2 1116 1344 305 115 33 chr17 69691730 69693038 -25579613 - L1MB3 LINE L1 -3 6180 4740 2 1116 823 191 7 0 chr17 69693038 69693185 -25579466 - B1_Mur2 SINE Alu -1 148 1 2 1116 1344 302 111 34 chr17 69693185 69693446 -25579205 - L1MB3 LINE L1 -1401 4739 4483 2 1116 349 267 19 0 chr17 69693709 69693814 -25578837 - L1MB3 LINE L1 -1723 4417 4311 2 1116 333 0 0 0 chr17 69694913 69694950 -25577701 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 1116 1944 136 11 74 chr17 69694979 69695329 -25577322 - ORR1A4 LTR MaLR -1 328 1 2 1116 438 196 0 0 chr17 69695329 69695426 -25577225 + (TA)n Simple_repeat Simple_repeat 2 98 0 2 1116 301 29 0 0 chr17 69695427 69695462 -25577189 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1116 508 316 46 46 chr17 69695690 69695909 -25576742 - Lx8 LINE L1 -73 7400 7182 2 1116 643 287 72 42 chr17 69695939 69696339 -25576312 - L1M5 LINE L1 -1183 4963 4538 2 1116 310 314 6 39 chr17 69696523 69696705 -25575946 + (TATG)n Simple_repeat Simple_repeat 1 176 0 2 1116 816 279 61 24 chr17 69696720 69696966 -25575685 - B4A SINE B4 -10 282 28 2 1116 49 0 0 0 chr17 69697071 69697120 -25575531 + AT_rich Low_complexity Low_complexity 1 49 0 2 1116 736 218 0 6 chr17 69697138 69697287 -25575364 + B3A SINE B2 40 179 -37 2 1116 500 297 109 34 chr17 69697314 69697607 -25575044 + L1M4 LINE L1 4406 4720 -1426 2 1116 1810 104 129 20 chr17 69697615 69697909 -25574742 - Lx LINE L1 -4 6650 6325 2 1116 3118 69 12 2 chr17 69697906 69698313 -25574338 + Lx LINE L1 5920 6330 -324 2 1116 234 267 80 110 chr17 69698388 69698762 -25573889 + LTR55 LTR ERV 27 389 -159 2 1116 380 280 192 16 chr17 69698812 69699135 -25573516 + L1M4 LINE L1 4777 5156 -990 2 1116 6452 60 11 9 chr17 69699182 69700678 -25571973 + L1VL2 LINE L1 325 1826 -1789 2 1116 50 18 0 0 chr17 69701630 69701687 -25570964 + AT_rich Low_complexity Low_complexity 1 57 0 2 1116 21 57 0 0 chr17 69701800 69701835 -25570816 + AT_rich Low_complexity Low_complexity 1 35 0 2 1116 244 194 83 0 chr17 69701941 69702013 -25570638 + L1M2 LINE L1 2745 2822 -3321 2 1116 637 303 58 34 chr17 69702259 69702553 -25570098 + MLT2D LTR ERVL 58 358 -56 2 1116 303 173 59 12 chr17 69702592 69702691 -25569960 + (TAGA)n Simple_repeat Simple_repeat 3 109 0 2 1116 1406 81 16 5 chr17 69702691 69702878 -25569773 + B2_Mm2 SINE B2 2 190 -5 2 1116 303 173 59 12 chr17 69702878 69702948 -25569703 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 2 1116 22 0 0 0 chr17 69703067 69703089 -25569562 + AT_rich Low_complexity Low_complexity 1 22 0 2 1116 306 129 0 0 chr17 69703366 69703428 -25569223 + (TCTCTG)n Simple_repeat Simple_repeat 2 63 0 2 1116 473 147 174 0 chr17 69703591 69703700 -25568951 - B1_Mur2 SINE Alu -8 141 14 2 1116 994 96 7 0 chr17 69703791 69703926 -25568725 + B1_Mus2 SINE Alu 2 137 -10 2 1116 243 0 0 0 chr17 69703926 69703953 -25568698 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1116 2088 156 37 71 chr17 69704739 69705152 -25567499 - RLTR11A LTR ERVK -4 524 138 2 1116 1825 146 0 55 chr17 69705152 69705478 -25567173 + RLTR10E LTR ERVK 1 308 -3 2 1116 2088 156 37 71 chr17 69705478 69705583 -25567068 - RLTR11A LTR ERVK -391 137 24 2 1116 477 0 0 0 chr17 69705639 69705692 -25566959 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 1116 366 258 139 18 chr17 69705760 69705926 -25566725 + MLT1C LTR MaLR 61 246 -221 2 1116 743 230 120 116 chr17 69705986 69706394 -25566257 - MT2A LTR ERVL -70 531 1 2 1116 1531 211 32 50 chr17 69706465 69706822 -25565829 + Lx5 LINE L1 6661 7314 -146 2 1116 296 179 149 0 chr17 69706889 69706956 -25565695 + MLT1C LTR MaLR 356 432 -35 2 1116 1072 95 7 0 chr17 69707464 69707611 -25565040 + B1_Mus1 SINE Alu 1 148 0 2 1116 290 254 87 55 chr17 69707823 69708006 -25564645 - MER53 DNA hAT -3 190 2 2 1116 498 122 0 0 chr17 69708132 69708230 -25564421 + (GA)n Simple_repeat Simple_repeat 1 98 0 2 1116 2623 74 3 0 chr17 69709349 69709675 -25562976 - ORR1A2 LTR MaLR 0 327 1 2 1116 927 236 87 70 chr17 69710605 69710843 -25561808 + ORR1D2 LTR MaLR 1 261 -109 2 1116 2188 88 65 7 chr17 69710843 69711152 -25561499 + ORR1A2 LTR MaLR 1 327 0 2 1116 927 236 87 70 chr17 69711152 69711175 -25561476 + ORR1D2 LTR MaLR 262 272 -98 2 1116 270 0 0 0 chr17 69711175 69711205 -25561446 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 2 1116 2354 100 0 3 chr17 69711205 69711516 -25561135 + RLTR10E LTR ERVK 2 311 0 2 1116 5214 56 16 3 chr17 69711521 69712166 -25560485 - L1Md_F2 LINE L1 -10 6572 5920 2 1116 927 236 87 70 chr17 69712166 69712252 -25560399 + ORR1D2 LTR MaLR 275 360 -10 2 1116 212 100 25 0 chr17 69714044 69714084 -25558567 + (TTTTA)n Simple_repeat Simple_repeat 2 42 0 2 1116 1707 26 0 0 chr17 69714264 69714456 -25558195 + B2_Mm1a SINE B2 2 193 0 2 1116 657 182 77 18 chr17 69714467 69714635 -25558016 + B3A SINE B2 2 179 -19 2 1116 2531 114 49 26 chr17 69714636 69715115 -25557536 - RMER16 LTR ERVK 0 533 1 2 1116 433 283 101 56 chr17 69715349 69715604 -25557047 - Lx8 LINE L1 -24 7449 7181 2 1116 3315 62 0 0 chr17 69715604 69716004 -25556647 - MTB LTR MaLR 0 400 1 2 1116 433 283 101 56 chr17 69716004 69716036 -25556615 - Lx8 LINE L1 -293 7180 7149 2 1116 982 265 63 25 chr17 69716023 69716309 -25556342 - Lx8 LINE L1 -440 7033 6737 2 1116 698 186 0 3 chr17 69716691 69716841 -25555810 - L1_Mur1 LINE L1 -583 5297 5158 2 1116 6033 139 30 10 chr17 69716841 69717860 -25554791 + Lx3C LINE L1 5933 6972 -4 2 1116 186 191 0 0 chr17 69717860 69717902 -25554749 + (TAA)n Simple_repeat Simple_repeat 1 42 0 2 1116 964 217 35 0 chr17 69718699 69718897 -25553754 - B3 SINE B2 -7 209 5 2 1116 2246 107 9 9 chr17 69718961 69719290 -25553361 + ORR1A4 LTR MaLR 1 329 0 2 1116 197 194 0 0 chr17 69719404 69719440 -25553211 + MER5B DNA MER1_type 137 172 -6 2 1116 575 225 155 35 chr17 69719547 69719912 -25552739 + MT2A LTR ERVL 1 456 -145 2 1116 270 0 0 0 chr17 69719935 69719965 -25552686 + (TCTA)n Simple_repeat Simple_repeat 3 32 0 2 1116 242 146 76 0 chr17 69720025 69720091 -25552560 + MT2A LTR ERVL 479 593 -8 2 1116 211 307 234 6 chr17 69720136 69720457 -25552194 + L2a LINE L2 2995 3388 -38 2 1116 303 306 85 24 chr17 69720467 69720631 -25552020 + MER2 DNA MER2_type 2 175 -170 2 1116 1117 141 26 4 chr17 69720629 69720867 -25551784 + RMER6A LTR ERVK 58 346 -410 2 1116 38 0 0 0 chr17 69720983 69721021 -25551630 + AT_rich Low_complexity Low_complexity 1 38 0 2 1116 2435 115 15 20 chr17 69721051 69721460 -25551191 + RMER6A LTR ERVK 350 756 0 2 1116 371 252 44 53 chr17 69721468 69721581 -25551070 + MER2 DNA MER2_type 173 284 -61 2 1116 1524 33 5 16 chr17 69722814 69723001 -25549650 + B2_Mm2 SINE B2 2 186 -9 2 1116 571 333 4 31 chr17 69723671 69723900 -25548751 + L1MCa LINE L1 349 571 -5937 2 1116 318 115 0 0 chr17 69724107 69724168 -25548483 + (TTTG)n Simple_repeat Simple_repeat 1 61 0 2 1116 230 118 72 14 chr17 69724185 69724254 -25548397 + (GTTTG)n Simple_repeat Simple_repeat 2 74 0 2 1116 491 266 66 33 chr17 69724283 69724521 -25548130 + L1MCa LINE L1 2254 2499 -3822 2 1116 3229 176 203 42 chr17 69724655 69725432 -25547219 + RMER19B LTR ERVK 1 902 0 2 1116 372 311 44 7 chr17 69725597 69725733 -25546918 + RSINE1 SINE B4 3 143 -22 2 1116 421 78 0 45 chr17 69726161 69726214 -25546437 + ORR1A2 LTR MaLR 5 57 -270 2 1116 1255 85 6 28 chr17 69726214 69726396 -25546255 + B2_Mm1t SINE B2 2 179 -14 2 1116 421 267 40 49 chr17 69726396 69726463 -25546188 + ORR1A2 LTR MaLR 58 140 -227 2 1116 280 126 319 26 chr17 69726443 69726556 -25546095 + B2_Mm2 SINE B2 47 192 -3 3 1116 1839 123 3 3 chr17 69726554 69726847 -25545804 + ORR1A2 LTR MaLR 27 319 -8 2 1116 226 320 31 10 chr17 69726869 69726967 -25545684 + L1MEf LINE L1 551 650 -5550 3 1116 1170 316 109 4 chr17 69727032 69727499 -25545152 + MTE-int LTR MaLR 1019 1534 -46 3 1116 3447 81 156 18 chr17 69727504 69728017 -25544634 - MT2B2 LTR ERVL 0 584 1 3 1116 273 232 47 47 chr17 69728252 69728338 -25544313 + MTEa LTR MaLR 279 364 -15 3 1116 264 291 33 33 chr17 69728681 69728802 -25543849 - BGLII_B LTR ERVK -27 414 294 3 1116 366 225 129 34 chr17 69728876 69729023 -25543628 + MT2B LTR ERVL 441 601 0 3 1117 408 236 182 18 chr17 69730617 69730809 -25541842 + B3A SINE B2 3 211 -5 3 1117 964 211 19 23 chr17 69730911 69731125 -25541526 + B3 SINE B2 1 213 -3 3 1117 203 140 60 0 chr17 69732121 69732171 -25540480 + (CG)n Simple_repeat Simple_repeat 2 54 0 3 1117 23 0 0 0 chr17 69732473 69732496 -25540155 + AT_rich Low_complexity Low_complexity 1 23 0 3 1117 208 227 45 0 chr17 69732633 69732699 -25539952 + G-rich Low_complexity Low_complexity 3 71 0 3 1117 22 0 0 0 chr17 69732856 69732878 -25539773 + GC_rich Low_complexity Low_complexity 1 22 0 3 1117 28 29 0 0 chr17 69732955 69732990 -25539661 + GC_rich Low_complexity Low_complexity 1 35 0 3 1117 24 0 0 0 chr17 69733068 69733092 -25539559 + GC_rich Low_complexity Low_complexity 1 24 0 3 1117 22 88 0 0 chr17 69733139 69733196 -25539455 + GC_rich Low_complexity Low_complexity 1 57 0 3 1117 575 140 0 20 chr17 69735339 69735441 -25537210 + B1_Mus2 SINE Alu 42 141 -6 3 1117 232 261 75 64 chr17 69735559 69735653 -25536998 + MER46C DNA MER2_type 244 338 0 3 1117 267 344 11 11 chr17 69736052 69736146 -25536505 - B4A SINE B4 -40 252 159 3 1117 190 0 67 0 chr17 69736494 69736524 -25536127 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 3 1117 216 97 0 0 chr17 69738213 69738244 -25534407 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1117 1118 81 0 7 chr17 69740339 69740477 -25532174 + B1_Mus1 SINE Alu 1 138 -10 3 1117 387 0 0 0 chr17 69740477 69740520 -25532131 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 3 1117 254 248 74 66 chr17 69740694 69740713 -25531938 + ID_B1 SINE B4 80 150 -74 3 1117 261 172 110 44 chr17 69740713 69740804 -25531847 + B1F1 SINE Alu 15 111 -38 3 1117 254 248 74 66 chr17 69740804 69740815 -25531836 + ID_B1 SINE B4 151 201 -23 3 1117 279 264 57 8 chr17 69741032 69741144 -25531507 - B1_Mus2 SINE Alu -29 120 10 3 1117 203 356 28 46 chr17 69741756 69741865 -25530786 - L2b LINE L2 -5 3370 3264 3 1117 364 270 174 7 chr17 69742047 69742185 -25530466 + RSINE1 SINE B4 5 165 0 3 1117 449 165 132 0 chr17 69742549 69742640 -25530011 + B3 SINE B2 8 110 -106 3 1117 794 172 7 7 chr17 69742643 69742789 -25529862 + B1_Mus1 SINE Alu 1 146 -2 3 1117 183 42 0 0 chr17 69742858 69742882 -25529769 + (TTGG)n Simple_repeat Simple_repeat 4 27 0 3 1117 189 0 0 0 chr17 69742890 69742911 -25529740 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1117 1126 82 7 0 chr17 69742911 69743057 -25529594 - B1_Mus2 SINE Alu 0 147 1 3 1117 2628 80 0 0 chr17 69743639 69743965 -25528686 + ORR1A2 LTR MaLR 1 326 -1 3 1117 451 319 7 35 chr17 69744002 69744145 -25528506 - ID_B1 SINE B4 -4 220 82 3 1117 252 143 0 0 chr17 69744158 69744200 -25528451 + (GGA)n Simple_repeat Simple_repeat 1 42 0 3 1117 264 152 0 0 chr17 69745876 69745942 -25526709 + C-rich Low_complexity Low_complexity 1 66 0 3 1117 203 0 0 36 chr17 69746084 69746112 -25526539 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 3 1117 180 0 0 0 chr17 69746246 69746266 -25526385 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 3 1117 189 0 0 0 chr17 69746557 69746578 -25526073 + (CAGA)n Simple_repeat Simple_repeat 1 21 0 3 1117 365 350 55 37 chr17 69746795 69747068 -25525583 + RMER5 LTR ERV1 239 516 -18 3 1117 276 301 52 26 chr17 69748114 69748230 -25524421 + PB1D9 SINE Alu 1 119 -1 3 1117 346 255 36 54 chr17 69748264 69748376 -25524275 + PB1 SINE Alu 9 118 -9 3 1117 944 204 70 121 chr17 69748509 69748847 -25523804 - MT2A LTR ERVL -132 469 17 3 1117 1173 74 0 0 chr17 69749054 69749202 -25523449 - B1_Mus1 SINE Alu 0 148 1 3 1117 241 148 44 103 chr17 69750362 69750430 -25522221 - MER31A LTR ERV1 -404 81 18 3 1117 2036 150 37 29 chr17 69750974 69751352 -25521299 + MTB_Mm LTR MaLR 17 397 -10 3 1117 464 260 87 77 chr17 69752190 69752386 -25520265 + B3A SINE B2 1 198 0 3 1117 282 73 0 0 chr17 69752525 69752566 -25520085 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1117 495 220 152 0 chr17 69752640 69752758 -25519893 - B1_Mur2 SINE Alu -2 147 12 3 1117 260 228 132 48 chr17 69752684 69752767 -25519884 - MT2B LTR ERVL -345 256 167 3 1117 341 352 50 7 chr17 69752784 69752924 -25519727 - PB1D10 SINE Alu -1 148 3 3 1117 1764 232 13 37 chr17 69753091 69753548 -25519103 - RMER19C LTR ERVK 0 611 166 3 1117 341 238 25 0 chr17 69753778 69753858 -25518793 - PB1D10 SINE Alu -8 109 28 3 1117 216 0 0 0 chr17 69753962 69753986 -25518665 + (TTAA)n Simple_repeat Simple_repeat 2 25 0 3 1117 343 266 43 0 chr17 69753993 69754087 -25518564 - RSINE1 SINE B4 0 165 68 3 1117 419 149 54 54 chr17 69754090 69754182 -25518469 + L1_Mur3 LINE L1 3412 3503 -2377 3 1117 22481 76 11 4 chr17 69754181 69757876 -25514775 - L1Md_F2 LINE L1 0 6582 2865 3 1117 1686 187 71 3 chr17 69757874 69758255 -25514396 + L1_Mur3 LINE L1 3489 3895 -1985 3 1117 425 127 12 25 chr17 69758257 69758338 -25514313 + ORR1A2 LTR MaLR 13 92 -235 3 1117 308 43 0 21 chr17 69758656 69758703 -25513948 + (TTTTTG)n Simple_repeat Simple_repeat 4 49 0 3 1117 1150 75 0 0 chr17 69758703 69758849 -25513802 - B1_Mus1 SINE Alu 0 148 3 3 1117 504 315 128 46 chr17 69759264 69759717 -25512934 - L1MC3 LINE L1 -362 7423 6934 3 1117 240 330 18 18 chr17 69759781 69759892 -25512759 - L1MC3 LINE L1 -962 6823 6713 3 1117 582 97 1 8 chr17 69760854 69760943 -25511708 - B2_Mm2 SINE B2 -90 103 14 3 1117 567 0 0 0 chr17 69760943 69761006 -25511645 + (TC)n Simple_repeat Simple_repeat 2 64 0 3 1117 1182 62 0 0 chr17 69761006 69761151 -25511500 - B1_Mus2 SINE Alu -2 145 1 3 1117 542 99 9 122 chr17 69761151 69761175 -25511476 - B2_Mm1t SINE B2 -172 21 3 3 1117 280 332 69 5 chr17 69761382 69761570 -25511081 - MLT1C LTR MaLR -173 294 95 3 1117 1389 312 66 41 chr17 69762698 69763260 -25509391 - MTE-int LTR MaLR -43 1537 962 3 1117 2234 123 31 8 chr17 69763274 69763660 -25508991 - RLTR11A LTR ERVK 0 528 134 3 1117 246 256 86 43 chr17 69763889 69764028 -25508623 - RMER15 LTR ERVL 0 575 431 3 1117 931 132 101 28 chr17 69764047 69764226 -25508425 + MTB_Mm LTR MaLR 49 240 -167 3 1117 866 303 93 8 chr17 69765313 69765689 -25506962 - MER67C LTR ERV1 -180 531 124 3 1117 214 200 0 0 chr17 69765762 69765802 -25506849 + T-rich Low_complexity Low_complexity 1 40 0 3 1117 285 125 0 0 chr17 69767791 69767839 -25504812 - B3A SINE B2 -150 48 1 3 1117 378 237 43 0 chr17 69768572 69768665 -25503986 - B3A SINE B2 -28 170 74 3 1117 191 314 29 0 chr17 69769007 69769077 -25503574 + MIR SINE MIR 191 262 0 3 1117 360 43 0 0 chr17 69769229 69769275 -25503376 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1117 452 291 66 14 chr17 69769342 69769567 -25503084 - L1M4 LINE L1 -442 5738 5485 3 1117 469 266 68 21 chr17 69769627 69769819 -25502832 - B3 SINE B2 -10 206 6 3 1117 1424 285 127 67 chr17 69769883 69771061 -25501590 - L1M4 LINE L1 -1007 5139 3891 3 1117 245 242 16 0 chr17 69771200 69771262 -25501389 - L1M4 LINE L1 -2776 3370 3308 3 1117 676 267 33 22 chr17 69771262 69771442 -25501209 + B3A SINE B2 1 182 -16 3 1117 328 266 44 12 chr17 69771521 69771681 -25500970 - L1M4 LINE L1 -2833 3313 3149 3 1117 1260 21 0 14 chr17 69771681 69771829 -25500822 - B1_Mus2 SINE Alu -1 146 1 3 1117 800 266 87 41 chr17 69771952 69772297 -25500354 + MLT1B LTR MaLR 30 390 0 3 1117 763 208 191 69 chr17 69772402 69772480 -25500171 - ORR1C2 LTR MaLR 0 384 291 3 1117 1047 56 20 34 chr17 69772480 69772628 -25500023 - B1_Mm SINE Alu 0 147 2 3 1117 763 208 191 69 chr17 69772628 69772884 -25499767 - ORR1C2 LTR MaLR -94 290 9 3 1117 671 340 104 12 chr17 69773569 69773983 -25498668 - LTR79 LTR ERVL 0 527 76 3 1117 429 66 0 0 chr17 69774446 69774507 -25498144 + (TG)n Simple_repeat Simple_repeat 1 61 0 3 1117 791 263 29 51 chr17 69774507 69774555 -25498096 - B4A SINE B4 -23 269 220 3 1117 1111 45 37 8 chr17 69774555 69774802 -25497849 + (TCTA)n Simple_repeat Simple_repeat 1 254 0 3 1117 791 263 29 51 chr17 69774802 69775024 -25497627 - B4A SINE B4 -73 219 4 3 1117 1090 189 10 0 chr17 69775043 69775249 -25497402 - B3 SINE B2 -3 213 6 3 1117 419 350 67 19 chr17 69775408 69775676 -25496975 + Lx8 LINE L1 6955 7235 -238 3 1117 792 180 13 58 chr17 69775683 69775862 -25496789 + B3 SINE B2 16 192 -24 3 1117 387 0 0 0 chr17 69775864 69775907 -25496744 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1117 235 284 159 40 chr17 69775935 69776111 -25496540 + Lx8 LINE L1 7253 7449 -24 3 1117 779 178 14 7 chr17 69776698 69776845 -25495806 - B1_Mur1 SINE Alu 0 149 2 3 1117 189 316 122 59 chr17 69778515 69778801 -25493850 - L2c LINE L2 -3 3384 3081 3 1117 1793 231 28 178 chr17 69779326 69779992 -25492659 - RMER19C LTR ERVK -1 610 60 3 1117 189 0 0 0 chr17 69779992 69780013 -25492638 + (CAA)n Simple_repeat Simple_repeat 1 21 0 3 1117 1793 231 28 178 chr17 69780013 69780064 -25492587 - RMER19C LTR ERVK -552 59 3 3 1117 329 317 81 20 chr17 69780081 69780229 -25492422 + MER58A DNA MER1_type 26 182 -42 3 1117 707 242 63 34 chr17 69780314 69780519 -25492132 + B3 SINE B2 2 212 -4 3 1117 324 120 0 0 chr17 69780534 69780584 -25492067 + (TGGA)n Simple_repeat Simple_repeat 3 52 0 3 1117 1509 247 26 44 chr17 69781026 69781211 -25491440 - MTD LTR MaLR -23 396 203 3 1117 1216 110 66 0 chr17 69781211 69781233 -25491418 - B2_Mm2 SINE B2 -1 194 161 3 1117 504 0 0 0 chr17 69781233 69781289 -25491362 + (TTTA)n Simple_repeat Simple_repeat 3 58 0 4 1117 1216 110 66 0 chr17 69781289 69781448 -25491203 - B2_Mm2 SINE B2 -35 160 2 3 1117 1509 247 26 44 chr17 69781448 69781652 -25490999 - MTD LTR MaLR -217 202 14 3 1117 200 122 0 24 chr17 69781655 69781697 -25490954 + (CCAA)n Simple_repeat Simple_repeat 2 42 0 4 1117 263 355 56 34 chr17 69781986 69782164 -25490487 + MIRb SINE MIR 53 234 -34 4 1117 246 224 29 43 chr17 69782624 69782694 -25489957 + ID_B1 SINE B4 153 221 -3 4 1117 245 292 14 27 chr17 69782707 69782722 -25489929 + B4 SINE B4 72 144 -148 4 1117 312 175 0 34 chr17 69782722 69782781 -25489870 + PB1D9 SINE Alu 3 59 -61 4 1117 284 0 0 160 chr17 69782782 69782926 -25489725 + (CAGAG)n Simple_repeat Simple_repeat 5 125 0 4 1117 585 34 0 33 chr17 69782928 69783019 -25489632 + (GA)n Simple_repeat Simple_repeat 2 89 0 4 1117 445 82 0 0 chr17 69783019 69783080 -25489571 + B1_Mur4 SINE Alu 46 106 -44 4 1117 444 235 39 16 chr17 69783430 69783880 -25488771 + (CATGT)n Simple_repeat Simple_repeat 1 460 0 4 1117 814 179 249 0 chr17 69784876 69785049 -25487602 + B3 SINE B2 1 216 0 4 1117 216 86 0 0 chr17 69786278 69786313 -25486338 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1117 831 135 6 24 chr17 69786637 69786804 -25485847 + CT-rich Low_complexity Low_complexity 2 165 0 4 1117 915 179 0 0 chr17 69786804 69786949 -25485702 - B1_Mur2 SINE Alu -2 147 3 4 1117 562 60 24 0 chr17 69789514 69789597 -25483054 + (TC)n Simple_repeat Simple_repeat 2 86 0 4 1117 369 0 0 0 chr17 69789645 69789686 -25482965 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1117 207 0 0 0 chr17 69789741 69789764 -25482887 + (TC)n Simple_repeat Simple_repeat 2 24 0 4 1117 1245 133 94 0 chr17 69790151 69790354 -25482297 + URR1A DNA MER1_type 1 222 -4 4 1117 37 0 0 0 chr17 69790868 69790905 -25481746 + AT_rich Low_complexity Low_complexity 1 37 0 4 1117 441 288 114 18 chr17 69793161 69793380 -25479271 - MLT1A LTR MaLR -24 350 111 4 1117 4559 81 2 0 chr17 69793432 69794015 -25478636 - MT2B2 LTR ERVL 0 584 1 4 1117 478 286 127 33 chr17 69794037 69794337 -25478314 - L1MD1 LINE L1 -343 5899 5572 4 1117 281 227 30 0 chr17 69794380 69794446 -25478205 - L1M5 LINE L1 -705 5468 5401 4 1117 381 318 0 106 chr17 69794529 69794652 -25477999 - RSINE1 SINE B4 0 165 56 4 1117 827 140 7 0 chr17 69794664 69794807 -25477844 + (TTTC)n Simple_repeat Simple_repeat 2 145 0 4 1117 785 145 14 0 chr17 69794795 69794940 -25477711 + CT-rich Low_complexity Low_complexity 4 150 0 4 1117 1119 103 5 5 chr17 69794950 69795136 -25477515 - Lx3_Mus LINE L1 0 7009 6824 4 1117 254 271 214 38 chr17 69795190 69795531 -25477120 - L1MC LINE L1 -766 5380 4980 4 1117 352 285 94 60 chr17 69796141 69796376 -25476275 - L1MA4 LINE L1 -362 5938 5696 4 1117 341 188 12 0 chr17 69796390 69796470 -25476181 + (CATATA)n Simple_repeat Simple_repeat 6 86 0 4 1117 291 28 0 0 chr17 69796487 69796523 -25476128 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1117 198 0 0 0 chr17 69796524 69796546 -25476105 + (CTGTG)n Simple_repeat Simple_repeat 1 22 0 4 1117 449 297 141 41 chr17 69796546 69796915 -25475736 - L1MA4 LINE L1 -627 5664 5259 4 1117 349 314 169 9 chr17 69797086 69797423 -25475228 - L1MA4 LINE L1 -1372 4771 4381 4 1117 3802 150 44 19 chr17 69797423 69798102 -25474549 - Lx3C LINE L1 -2 6974 6279 4 1117 1981 158 11 11 chr17 69798109 69798468 -25474183 - Lx3C LINE L1 -819 6157 5799 4 1117 3060 149 98 16 chr17 69798460 69799019 -25473632 + Lx3C LINE L1 5195 5799 -87 4 1117 889 122 58 0 chr17 69799020 69799159 -25473492 + B1_Mus1 SINE Alu 2 148 0 4 1117 232 186 51 0 chr17 69799205 69799264 -25473387 - L1MA4 LINE L1 -1731 4412 4351 4 1117 258 301 61 9 chr17 69799250 69799364 -25473287 - L1M5 LINE L1 -3239 2907 2788 4 1117 787 236 48 24 chr17 69799647 69799855 -25472796 - B3 SINE B2 -1 215 3 4 1117 308 267 91 24 chr17 69799899 69800064 -25472587 - Lx8 LINE L1 0 7473 7298 4 1117 188 111 0 27 chr17 69800658 69800695 -25471956 + (TATAA)n Simple_repeat Simple_repeat 5 40 0 4 1117 380 308 130 0 chr17 69800704 69800912 -25471739 - MER82 DNA MER2_type -412 241 7 4 1117 213 0 0 75 chr17 69801394 69801434 -25471217 + (TTTTTG)n Simple_repeat Simple_repeat 6 42 0 4 1117 267 103 0 0 chr17 69801670 69801709 -25470942 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1117 376 326 10 10 chr17 69801728 69801827 -25470824 - RSINE1 SINE B4 -60 105 7 4 1117 228 349 68 22 chr17 69802238 69802421 -25470230 + MIRb SINE MIR 8 196 -72 4 1117 411 278 173 13 chr17 69802428 69802833 -25469818 + L1MA4A LINE L1 5709 6180 -117 4 1117 330 298 95 40 chr17 69804177 69804303 -25468348 - B1_Mur2 SINE Alu -8 141 9 4 1117 189 0 0 0 chr17 69804595 69804616 -25468035 + (CAAAA)n Simple_repeat Simple_repeat 1 21 0 4 1117 200 0 215 0 chr17 69805085 69805150 -25467501 + (GGATG)n Simple_repeat Simple_repeat 3 81 0 4 1117 440 322 65 79 chr17 69805604 69805702 -25466949 + B4 SINE B4 2 91 -201 4 1117 1613 27 21 0 chr17 69805702 69805889 -25466762 + B2_Mm1a SINE B2 1 191 -2 4 1117 440 322 65 79 chr17 69805889 69806006 -25466645 + B4 SINE B4 92 214 -78 4 1117 287 310 10 10 chr17 69806091 69806192 -25466459 + (CA)n Simple_repeat Simple_repeat 1 101 0 4 1117 270 95 0 0 chr17 69806223 69806265 -25466386 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1117 294 183 0 0 chr17 69806382 69806453 -25466198 + (CA)n Simple_repeat Simple_repeat 1 71 0 4 1117 186 133 0 0 chr17 69806767 69806797 -25465854 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 4 1117 1686 156 152 12 chr17 69807071 69807268 -25465383 - ORR1C1 LTR MaLR 0 378 177 4 1117 516 16 0 0 chr17 69807268 69807329 -25465322 + (GA)n Simple_repeat Simple_repeat 2 62 0 4 1117 1686 156 152 12 chr17 69807329 69807461 -25465190 - ORR1C1 LTR MaLR -202 176 5 4 1117 213 39 0 0 chr17 69808006 69808032 -25464619 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1117 696 188 0 0 chr17 69810310 69810448 -25462203 + (TA)n Simple_repeat Simple_repeat 2 139 0 4 1117 22 35 0 0 chr17 69810736 69810765 -25461886 + AT_rich Low_complexity Low_complexity 1 29 0 4 1117 709 317 91 16 chr17 69811034 69811419 -25461232 + MLT2C2 LTR ERVL 1 414 -50 4 1117 205 255 0 19 chr17 69811727 69811779 -25460872 + CT-rich Low_complexity Low_complexity 4 54 0 4 1117 206 57 0 54 chr17 69812245 69812282 -25460369 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 4 1117 195 129 0 0 chr17 69812287 69812318 -25460333 + (CAA)n Simple_repeat Simple_repeat 2 32 0 4 1117 305 127 418 10 chr17 69813099 69813202 -25459449 - B2_Mm2 SINE B2 -4 191 47 4 1117 1066 79 36 0 chr17 69813280 69813420 -25459231 - B1_Mus2 SINE Alu -1 146 2 4 1117 1238 94 23 0 chr17 69813420 69813591 -25459060 - B2_Mm1t SINE B2 -15 178 4 4 1117 2380 121 118 7 chr17 69814771 69815195 -25457456 - RMER16 LTR ERVK 0 533 63 4 1117 1884 99 0 0 chr17 69815217 69815489 -25457162 - MTB LTR MaLR 0 400 129 4 1117 198 0 0 0 chr17 69815587 69815609 -25457042 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 1117 1365 260 41 27 chr17 69815918 69816404 -25456247 - RMER5 LTR ERV1 -10 524 32 4 1117 180 0 0 0 chr17 69817211 69817231 -25455420 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 1117 263 220 17 0 chr17 69818681 69818740 -25453911 + Lx8 LINE L1 5847 5906 -1567 4 1117 624 229 0 0 chr17 69818748 69818914 -25453737 + (CA)n Simple_repeat Simple_repeat 2 167 0 4 1117 185 281 0 10 chr17 69818934 69819031 -25453620 + (CA)n Simple_repeat Simple_repeat 2 97 0 4 1117 395 261 21 76 chr17 69819661 69819806 -25452845 + B3 SINE B2 80 216 0 4 1117 216 0 0 0 chr17 69820213 69820237 -25452414 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1117 22 0 0 0 chr17 69820376 69820398 -25452253 + AT_rich Low_complexity Low_complexity 1 22 0 4 1117 576 0 0 0 chr17 69821119 69821183 -25451468 + (TC)n Simple_repeat Simple_repeat 1 64 0 4 1117 378 0 0 0 chr17 69821183 69821224 -25451427 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1117 1171 301 82 11 chr17 69822458 69822992 -25449659 + L1M2 LINE L1 3589 4160 -1983 4 1117 393 278 29 122 chr17 69823086 69823258 -25449393 + RSINE1 SINE B4 3 158 -7 4 1117 1493 183 27 24 chr17 69823611 69823907 -25448744 - ORR1D1 LTR MaLR 0 374 78 4 1117 257 276 13 26 chr17 69825527 69825605 -25447046 + RSINE1 SINE B4 3 79 -86 4 1117 420 257 48 0 chr17 69825845 69825967 -25446684 - L1MC1 LINE L1 -4 6340 6208 4 1117 241 275 11 21 chr17 69826025 69826118 -25446533 - L1MC1 LINE L1 -231 6102 6011 4 1117 2733 181 8 2 chr17 69826211 69826688 -25445963 - Lx2B LINE L1 -154 6846 6367 4 1117 223 355 23 39 chr17 69827594 69827723 -25444928 + L2b LINE L2 3246 3372 -3 4 1117 365 338 18 88 chr17 69827828 69828040 -25444611 + Lx8 LINE L1 7136 7339 -134 4 1117 243 0 0 0 chr17 69828040 69828067 -25444584 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1117 365 338 18 88 chr17 69828067 69828182 -25444469 + Lx8 LINE L1 7340 7440 -33 4 1117 279 0 0 0 chr17 69829303 69829334 -25443317 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1117 316 316 13 10 chr17 69831060 69831161 -25441490 - ID_B1 SINE B4 -49 175 79 4 1117 1218 181 54 19 chr17 69831374 69831633 -25441018 + ORR1C1 LTR MaLR 1 268 -110 4 1117 1020 195 166 59 chr17 69831767 69832105 -25440546 - RMER12 LTR ERVK -133 1189 816 4 1117 558 183 99 82 chr17 69832109 69832368 -25440283 - RLTR25B LTR ERVK -45 1058 757 4 1117 3452 172 86 46 chr17 69832450 69833171 -25439480 - RLTR25B LTR ERVK -156 872 119 4 1117 1111 73 0 0 chr17 69833171 69833307 -25439344 + B1_Mus2 SINE Alu 2 137 -10 4 1117 240 35 0 0 chr17 69833307 69833336 -25439315 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 4 1117 3452 172 86 46 chr17 69833336 69833446 -25439205 - RLTR25B LTR ERVK -910 118 7 4 1117 348 214 11 45 chr17 69833449 69833537 -25439114 - RMER12 LTR ERVK -502 820 736 4 1117 885 138 0 0 chr17 69833583 69833728 -25438923 + (TTTC)n Simple_repeat Simple_repeat 3 147 0 4 1117 3504 126 104 21 chr17 69833729 69834403 -25438248 - RMER12 LTR ERVK -592 730 1 4 1117 621 175 17 0 chr17 69834403 69834510 -25438141 + ORR1C1 LTR MaLR 251 359 -8 4 1117 254 224 82 0 chr17 69834605 69834690 -25437961 - MIRb SINE MIR -118 150 59 4 1117 1104 189 47 24 chr17 69834713 69834967 -25437684 - Lx9 LINE L1 -222 7422 7163 4 1117 528 180 188 64 chr17 69834949 69835006 -25437645 + Lx9 LINE L1 7417 7476 -168 4 1117 414 100 0 0 chr17 69835006 69835066 -25437585 + (TA)n Simple_repeat Simple_repeat 2 61 0 4 1117 528 180 188 64 chr17 69835066 69835210 -25437441 + Lx9 LINE L1 7477 7643 -1 4 1117 319 260 0 14 chr17 69835272 69835346 -25437305 - RMER13A LTR ERVK 0 860 788 4 1117 249 294 0 14 chr17 69835756 69835825 -25436826 + G-rich Low_complexity Low_complexity 2 69 0 4 1117 2143 139 16 14 chr17 69835999 69836364 -25436287 - RMER13A LTR ERVK -420 440 75 4 1117 192 267 0 29 chr17 69840775 69840914 -25431737 + G-rich Low_complexity Low_complexity 2 136 0 4 1117 263 325 101 45 chr17 69840988 69841475 -25431176 + HAL1b LINE L1 1247 1760 -249 5 1117 1233 223 169 6 chr17 69842975 69843313 -25429338 + MTD LTR MaLR 7 399 -22 5 1117 472 313 72 23 chr17 69843789 69844054 -25428597 - L1M5 LINE L1 -344 5818 5541 5 1117 2160 112 9 61 chr17 69844283 69844627 -25428024 + ORR1A3 LTR MaLR 1 326 0 5 1117 1203 107 0 0 chr17 69844729 69844907 -25427744 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 5 1117 333 0 0 0 chr17 69847311 69847348 -25425303 + (CAA)n Simple_repeat Simple_repeat 2 38 0 5 1117 3995 116 25 8 chr17 69847499 69848101 -25424550 + Lx2B LINE L1 6379 6990 -10 5 1117 194 0 0 37 chr17 69848101 69848128 -25424523 + (TAA)n Simple_repeat Simple_repeat 1 26 0 5 1117 322 77 0 0 chr17 69848257 69848309 -25424342 + L1_Mus4 LINE L1 6582 6633 -3 5 1117 453 206 0 161 chr17 69848905 69849067 -25423584 - RLTR21 LTR ERVK 0 1572 1437 5 1117 282 116 0 0 chr17 69849085 69849128 -25423523 + (CCCCCT)n Simple_repeat Simple_repeat 4 46 0 5 1117 1151 199 49 17 chr17 69849139 69849426 -25423225 - RMER12B LTR ERVK -186 1218 923 5 1117 601 204 7 7 chr17 69849524 69849672 -25422979 + (TA)n Simple_repeat Simple_repeat 2 149 0 5 1117 1224 124 32 5 chr17 69849721 69849907 -25422744 - B2_Mm2 SINE B2 -4 191 1 5 1117 2351 127 54 13 chr17 69850866 69851258 -25421393 + MTC LTR MaLR 14 421 0 5 1117 5428 166 69 58 chr17 69851257 69852490 -25420161 + MTC-int LTR MaLR 2 1248 -10 5 1117 2164 168 19 26 chr17 69852505 69852713 -25419938 + MTC LTR MaLR 2 210 -211 5 1117 1402 81 0 21 chr17 69852713 69852902 -25419749 + B2_Mm2 SINE B2 2 186 -9 5 1117 2164 168 19 26 chr17 69852902 69853116 -25419535 + MTC LTR MaLR 211 421 0 5 1117 2701 78 8 6 chr17 69853745 69854107 -25418544 + RLTR8 LTR ERVK 3 365 0 5 1117 339 231 33 39 chr17 69854673 69854853 -25417798 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 5 1117 250 195 64 47 chr17 69854818 69854990 -25417661 + (CATATA)n Simple_repeat Simple_repeat 5 179 0 5 1117 23 33 0 0 chr17 69855158 69855188 -25417463 + AT_rich Low_complexity Low_complexity 1 30 0 5 1117 381 75 0 0 chr17 69856205 69856258 -25416393 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1117 458 217 0 15 chr17 69856260 69856391 -25416260 + (CATA)n Simple_repeat Simple_repeat 2 130 0 5 1117 272 211 0 0 chr17 69856996 69857048 -25415603 + ID4 SINE ID 3 54 -29 5 1117 189 240 0 0 chr17 69857104 69857179 -25415472 + (CA)n Simple_repeat Simple_repeat 2 76 0 5 1117 242 100 0 39 chr17 69857183 69857235 -25415416 + (CAGA)n Simple_repeat Simple_repeat 1 50 0 5 1117 22 56 0 0 chr17 69858893 69858929 -25413722 + AT_rich Low_complexity Low_complexity 1 36 0 5 1117 263 91 0 0 chr17 69858946 69858990 -25413661 + B4A SINE B4 2 45 -247 5 1117 1434 199 62 57 chr17 69859142 69859514 -25413137 + ORR1D1 LTR MaLR 1 374 0 5 1117 444 19 0 0 chr17 69859535 69859588 -25413063 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1117 696 301 126 47 chr17 69859691 69860185 -25412466 - MER34A1 LTR ERV1 -4 583 51 5 1118 340 346 68 0 chr17 69862364 69862497 -25410154 + RSINE1 SINE B4 2 143 -22 5 1118 333 0 0 0 chr17 69862655 69862692 -25409959 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 1118 391 311 94 22 chr17 69862775 69862956 -25409695 - MLT2C2 LTR ERVL -166 298 105 5 1118 324 0 0 0 chr17 69863298 69863334 -25409317 + (TC)n Simple_repeat Simple_repeat 2 37 0 5 1118 485 222 28 0 chr17 69863421 69863529 -25409122 - PB1D10 SINE Alu -6 111 1 5 1118 462 296 0 0 chr17 69863739 69863847 -25408804 + B3A SINE B2 1 108 -90 5 1118 2840 67 7 39 chr17 69863848 69864254 -25408397 - L1Md_F2 LINE L1 0 6582 6190 5 1118 639 39 0 0 chr17 69864257 69864335 -25408316 + (CA)n Simple_repeat Simple_repeat 2 79 0 5 1118 323 261 22 11 chr17 69865748 69865837 -25406814 + MIRc SINE MIR 36 125 -143 5 1118 394 49 0 32 chr17 69866816 69866879 -25405772 + (TA)n Simple_repeat Simple_repeat 2 62 0 5 1118 456 246 145 16 chr17 69867397 69867583 -25405068 - B4A SINE B4 -44 248 39 5 1118 369 218 95 40 chr17 69868111 69868259 -25404392 - L1MC1 LINE L1 -10 6323 6168 5 1118 265 286 112 0 chr17 69868301 69868399 -25404252 - PB1D10 SINE Alu -8 109 1 5 1118 42097 3 1 0 chr17 69868421 69874997 -25397654 - L1Md_A LINE L1 0 6582 1 5 1118 21 71 0 0 chr17 69875088 69875130 -25397521 + AT_rich Low_complexity Low_complexity 1 42 0 5 1118 227 229 0 20 chr17 69876158 69876207 -25396444 + CT-rich Low_complexity Low_complexity 3 50 0 5 1118 860 159 27 14 chr17 69876207 69876354 -25396297 - B1_Mur2 SINE Alu 0 149 1 5 1118 844 340 102 28 chr17 69876648 69877111 -25395540 - MTE-int LTR MaLR -49 1531 1035 5 1118 914 184 30 0 chr17 69877113 69877281 -25395370 + MT2A LTR ERVL 4 176 -357 5 1118 587 153 36 0 chr17 69877275 69877386 -25395265 + MT2A LTR ERVL 108 222 -311 5 1118 7748 108 6 22 chr17 69877394 69878806 -25393845 - Lx LINE L1 -1 6653 5293 5 1118 1266 41 0 0 chr17 69878806 69878953 -25393698 - B1_Mm SINE Alu 0 147 1 5 1118 4433 138 8 84 chr17 69878953 69879150 -25393501 - Lx LINE L1 -591 5292 5108 5 1118 1285 182 0 4 chr17 69879127 69879369 -25393282 + Lx LINE L1 4872 5112 -771 5 1118 364 218 70 7 chr17 69879373 69879525 -25393126 + MT2A LTR ERVL 316 483 -118 5 1118 378 0 0 0 chr17 69879525 69879567 -25393084 + (CAAG)n Simple_repeat Simple_repeat 1 42 0 5 1118 331 278 94 21 chr17 69879567 69879630 -25393021 + MT2A LTR ERVL 454 520 -13 5 1118 2957 118 2 36 chr17 69879909 69880375 -25392276 + L1_Mus3 LINE L1 6186 6635 -3 5 1118 3337 36 5 0 chr17 69881636 69882029 -25390622 - L1_Mus1 LINE L1 0 6567 6173 5 1118 804 244 29 5 chr17 69883376 69883582 -25389069 - B3 SINE B2 -4 212 2 5 1118 258 288 40 99 chr17 69883946 69884153 -25388498 + MIRb SINE MIR 43 231 -31 5 1118 8368 37 18 1 chr17 69884222 69885884 -25386767 - L1Md_F2 LINE L1 -8 6574 4886 5 1118 2872 27 5 57 chr17 69886357 69886744 -25385907 - IAPLTR1_Mm LTR ERVK 0 367 1 5 1118 23655 19 17 1 chr17 69886744 69889968 -25382683 - IAPEz-int LTR ERVK 0 6481 3209 5 1118 7107 98 102 73 chr17 69889966 69891235 -25381416 - IAPEz-int LTR ERVK -5168 1313 8 5 1118 2872 27 5 57 chr17 69891235 69891622 -25381029 - IAPLTR1_Mm LTR ERVK 0 367 1 5 1118 613 305 85 26 chr17 69892377 69892717 -25379934 + L1ME3A LINE L1 5672 6031 -142 5 1118 520 209 9 0 chr17 69892816 69892921 -25379730 - B1F2 SINE Alu -1 148 43 5 1118 262 234 11 17 chr17 69892922 69893096 -25379555 + (TCTCTG)n Simple_repeat Simple_repeat 4 176 0 5 1118 320 190 0 33 chr17 69893143 69893203 -25379448 - B1_Mus2 SINE Alu -88 59 2 5 1118 578 299 81 99 chr17 69893276 69893532 -25379119 + Lx8 LINE L1 5904 6173 -1300 5 1118 306 0 0 0 chr17 69893532 69893566 -25379085 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 1118 578 299 81 99 chr17 69893566 69893660 -25378991 + Lx8 LINE L1 6174 6271 -1202 5 1118 773 192 27 20 chr17 69893660 69893790 -25378861 + B1_Mur4 SINE Alu 1 134 -16 5 1118 365 103 0 14 chr17 69893790 69893859 -25378792 + (CAAAT)n Simple_repeat Simple_repeat 1 68 0 5 1118 773 192 27 20 chr17 69893859 69893877 -25378774 + B1_Mur4 SINE Alu 135 149 -1 5 1118 578 299 81 99 chr17 69893877 69894030 -25378621 + Lx8 LINE L1 6272 6399 -1074 5 1118 10666 70 21 8 chr17 69894156 69894192 -25378459 - Lx3_Mus LINE L1 -8 7001 6968 5 1118 2726 53 21 3 chr17 69894192 69894532 -25378119 - ORR1A1 LTR MaLR 0 346 1 5 1118 10666 68 15 14 chr17 69894532 69896014 -25376637 - Lx3_Mus LINE L1 -42 6967 5473 5 1118 3007 75 2 0 chr17 69896005 69896416 -25376235 + L1_Mur1 LINE L1 4255 4666 -1220 5 1118 38800 40 2 3 chr17 69896414 69902644 -25370007 - L1Md_T LINE L1 0 6585 271 5 1118 6094 56 6 6 chr17 69902644 69903439 -25369212 + L1_Mur1 LINE L1 4653 5447 -439 5 1118 456 34 0 0 chr17 69904449 69904508 -25368143 + L1Md_F3 LINE L1 6512 6570 -14 5 1118 737 281 25 20 chr17 69904684 69904884 -25367767 + Lx8 LINE L1 6395 6595 -878 5 1118 234 194 45 0 chr17 69904922 69904989 -25367662 + Tigger7 DNA MER2_type 2294 2363 -128 5 1118 1034 288 191 24 chr17 69904994 69905460 -25367191 + Lx8 LINE L1 6597 7140 -333 5 1118 186 133 0 0 chr17 69905468 69905498 -25367153 + (GGGAGA)n Simple_repeat Simple_repeat 2 31 0 5 1118 353 194 22 22 chr17 69905503 69905682 -25366969 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 5 1118 595 96 46 46 chr17 69905735 69905910 -25366741 + (CAGAGA)n Simple_repeat Simple_repeat 6 180 0 5 1118 362 345 47 58 chr17 69906014 69906356 -25366295 - Lx8 LINE L1 -3 7470 7133 5 1118 508 246 153 22 chr17 69906368 69906485 -25366166 + Lx8 LINE L1 7210 7332 -141 5 1118 4475 42 4 4 chr17 69906485 69907016 -25365635 - L1Md_F2 LINE L1 0 6582 6052 5 1118 508 246 153 22 chr17 69907016 69907127 -25365524 + Lx8 LINE L1 7333 7468 -5 5 1118 3281 57 7 0 chr17 69907807 69908211 -25364440 - MTB_Mm LTR MaLR 0 407 1 5 1118 378 225 54 0 chr17 69908536 69908647 -25364004 + MER44A DNA MER2_type 105 221 -118 5 1118 728 186 8 0 chr17 69908682 69908811 -25363840 - B3 SINE B2 -86 130 1 5 1118 306 319 44 15 chr17 69908811 69908947 -25363704 + Tigger7 DNA MER2_type 2346 2485 -6 5 1118 1011 289 80 29 chr17 69909349 69909882 -25362769 - Lx8 LINE L1 -2 7471 6922 5 1118 687 99 149 0 chr17 69910264 69910385 -25362266 + B1_Mus1 SINE Alu 10 148 0 5 1118 367 277 96 46 chr17 69912308 69912505 -25360146 + L1ME2 LINE L1 5630 5836 -328 5 1118 505 299 59 52 chr17 69912768 69913057 -25359594 - RLTR9A LTR ERVK 0 368 78 5 1118 3216 179 100 26 chr17 69913111 69913838 -25358813 + Lx2B LINE L1 6218 6998 -2 5 1118 1409 66 22 0 chr17 69913848 69914031 -25358620 + B2_Mm2 SINE B2 2 188 -7 5 1118 4692 110 46 1 chr17 69914031 69914725 -25357926 - Lx4A LINE L1 -405 6653 5929 5 1118 1938 156 75 3 chr17 69914735 69915070 -25357581 + Lx4A LINE L1 6660 7018 -40 5 1118 778 241 72 77 chr17 69915667 69916095 -25356556 - RMER10A LTR ERVL -16 426 1 5 1118 196 346 70 8 chr17 69917778 69917906 -25354745 + MIRc SINE MIR 107 242 -26 5 1118 414 0 0 0 chr17 69918068 69918114 -25354537 + (TTTTA)n Simple_repeat Simple_repeat 5 50 0 5 1118 288 77 0 0 chr17 69918732 69918771 -25353880 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 1118 198 0 0 0 chr17 69918770 69918792 -25353859 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 1118 654 267 85 5 chr17 69918792 69918980 -25353671 - B3 SINE B2 -13 203 1 5 1118 1467 149 71 35 chr17 69919164 69919593 -25353058 - RMER17B LTR ERVK -48 910 451 5 1118 243 0 0 0 chr17 69919836 69919863 -25352788 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1118 2789 90 9 0 chr17 69920689 69921113 -25351538 - RMER17B LTR ERVK -530 428 1 5 1118 480 77 0 0 chr17 69922773 69922838 -25349813 + (GGGAGA)n Simple_repeat Simple_repeat 3 67 0 5 1118 935 149 6 0 chr17 69924346 69924514 -25348137 + CT-rich Low_complexity Low_complexity 1 169 0 5 1118 3398 164 12 10 chr17 69924514 69925098 -25347553 - Lx LINE L1 -1 6653 6069 5 1118 326 350 30 12 chr17 69925135 69925300 -25347351 + 7SLRNA srpRNA srpRNA 1 168 -146 5 1118 605 179 76 23 chr17 69925953 69926125 -25346526 - Lx9 LINE L1 -6 7638 7458 5 1118 511 173 0 18 chr17 69926125 69926237 -25346414 + (CA)n Simple_repeat Simple_repeat 1 110 0 6 1118 2614 129 44 13 chr17 69926246 69926703 -25345948 + RLTR31B_Mm LTR ERVK 1 471 -86 6 1118 585 0 0 0 chr17 69926714 69926779 -25345872 + (CATATA)n Simple_repeat Simple_repeat 4 68 0 6 1118 5078 227 69 23 chr17 69926806 69926847 -25345804 - Lx9 LINE L1 -127 7517 7480 6 1118 870 83 0 0 chr17 69926847 69926980 -25345671 + (CA)n Simple_repeat Simple_repeat 2 134 0 6 1118 5078 227 69 23 chr17 69926980 69927088 -25345563 - Lx9 LINE L1 -165 7479 7366 6 1118 3111 17 0 3 chr17 69927088 69927435 -25345216 - ORR1A0 LTR MaLR 0 346 1 6 1118 14238 53 9 1 chr17 69927435 69929212 -25343439 - ORR1A0-int LTR MaLR 0 1792 1 6 1118 3085 23 0 0 chr17 69929212 69929558 -25343093 - ORR1A0 LTR MaLR 0 346 1 6 1118 5078 227 69 23 chr17 69929558 69929943 -25342708 - Lx9 LINE L1 -279 7365 6972 6 1118 546 29 0 0 chr17 69929943 69930011 -25342640 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 6 1118 5078 227 69 23 chr17 69930011 69930762 -25341889 - Lx9 LINE L1 -673 6971 6172 6 1118 671 206 59 29 chr17 69932254 69932424 -25340227 - B3 SINE B2 -34 182 8 6 1118 2184 49 4 0 chr17 69932432 69932696 -25339955 - L1Md_F2 LINE L1 -12 6570 6306 6 1118 472 321 8 0 chr17 69932917 69933051 -25339600 - MER2 DNA MER2_type -1 344 210 6 1118 656 24 0 12 chr17 69934363 69934446 -25338205 + (TTTC)n Simple_repeat Simple_repeat 3 84 0 6 1118 252 0 0 0 chr17 69934580 69934608 -25338043 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 6 1118 180 75 113 0 chr17 69935131 69935184 -25337467 + (TTAAA)n Simple_repeat Simple_repeat 5 63 0 6 1118 1806 210 69 18 chr17 69935189 69935581 -25337070 - Lx2B LINE L1 -10 6990 6579 6 1118 688 44 0 0 chr17 69936019 69936109 -25336542 + B1_Mm SINE Alu 47 136 -11 6 1118 216 0 0 0 chr17 69936110 69936134 -25336517 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 6 1118 534 16 0 0 chr17 69936140 69936203 -25336448 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 6 1118 723 251 46 7 chr17 69936210 69936505 -25336146 - RLTR11A LTR ERVK -192 336 1 6 1118 2000 170 265 21 chr17 69936513 69936779 -25335872 - Lx9 LINE L1 -179 7465 7137 6 1118 6948 69 24 12 chr17 69936779 69937697 -25334954 + RLTR13B3 LTR ERVK 1 929 0 6 1118 2000 176 33 28 chr17 69937697 69937924 -25334727 - Lx9 LINE L1 -508 7136 6906 6 1118 371 56 19 0 chr17 69938100 69938154 -25334497 + (TG)n Simple_repeat Simple_repeat 1 55 0 6 1118 26 64 0 0 chr17 69938914 69938961 -25333690 + AT_rich Low_complexity Low_complexity 1 47 0 6 1118 915 242 9 14 chr17 69939275 69939489 -25333162 - B3 SINE B2 -2 214 2 6 1118 21 0 0 0 chr17 69939489 69939510 -25333141 + AT_rich Low_complexity Low_complexity 1 21 0 6 1118 376 299 0 18 chr17 69940228 69940337 -25332314 + PB1D10 SINE Alu 9 115 -2 6 1118 399 304 70 46 chr17 69940673 69940932 -25331719 + L1MC3 LINE L1 7108 7372 -413 6 1118 269 181 176 28 chr17 69940937 69941045 -25331606 - L1MC3 LINE L1 -688 7097 6974 6 1118 519 270 156 5 chr17 69941251 69941456 -25331195 + L1MC3 LINE L1 7409 7644 -141 6 1118 216 97 0 0 chr17 69941496 69941527 -25331124 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 1118 1520 292 114 10 chr17 69941599 69942194 -25330457 + Lx8 LINE L1 6766 7422 -51 6 1118 8342 25 0 0 chr17 69942202 69943131 -25329520 - RLTR13B3 LTR ERVK 0 929 1 6 1118 1051 197 117 21 chr17 69943135 69943520 -25329131 - MT2A LTR ERVL 0 533 61 6 1118 450 217 0 12 chr17 69943617 69943701 -25328950 - MT2A LTR ERVL -450 83 1 6 1118 244 152 0 0 chr17 69943704 69943750 -25328901 + Lx8 LINE L1 7428 7473 0 6 1118 843 166 105 12 chr17 69943939 69944110 -25328541 - 7SK RNA RNA -87 244 58 6 1118 309 319 95 35 chr17 69944302 69944471 -25328180 - LTR16C LTR ERVL -8 481 303 6 1118 1043 319 46 53 chr17 69944483 69944709 -25327942 + Lx8 LINE L1 6708 6910 -563 6 1118 1537 191 111 20 chr17 69944709 69944860 -25327791 + ORR1D1 LTR MaLR 1 185 -189 6 1118 600 14 0 0 chr17 69944860 69944929 -25327722 + (TCTCTG)n Simple_repeat Simple_repeat 4 72 0 6 1118 1537 191 111 20 chr17 69944929 69945120 -25327531 + ORR1D1 LTR MaLR 186 373 -1 6 1118 1043 319 46 53 chr17 69945120 69945416 -25327235 + Lx8 LINE L1 6911 7226 -247 6 1118 276 212 30 0 chr17 69945454 69945520 -25327131 + RMER15 LTR ERVL 403 470 -105 6 1118 674 269 41 10 chr17 69946010 69946218 -25326433 - B3A SINE B2 0 216 1 6 1118 543 147 0 25 chr17 69947494 69947613 -25325038 + GA-rich Low_complexity Low_complexity 3 118 0 6 1118 1674 195 78 119 chr17 69947615 69948051 -25324600 + RMER19B LTR ERVK 1 418 -484 6 1118 437 302 89 9 chr17 69948119 69948343 -25324308 - L1M4 LINE L1 -3004 3142 2901 6 1118 259 281 0 24 chr17 69948345 69948429 -25324222 - L1M4 LINE L1 -3748 2398 2317 6 1118 726 331 37 41 chr17 69949977 69950245 -25322406 - MTE2b LTR MaLR -112 267 1 6 1118 489 236 152 46 chr17 69950247 69950398 -25322253 - MTE2b-int LTR MaLR -2 1578 1412 6 1118 2882 226 112 15 chr17 69950398 69951517 -25321134 + Lx6 LINE L1 5883 7110 -350 6 1118 387 0 0 0 chr17 69951517 69951560 -25321091 + (TC)n Simple_repeat Simple_repeat 2 44 0 6 1118 993 243 39 35 chr17 69951561 69951872 -25320779 + Lx6 LINE L1 7149 7460 0 6 1118 1424 274 70 100 chr17 69951881 69951930 -25320721 - MTE2b-int LTR MaLR -155 1425 1390 6 1118 788 299 24 0 chr17 69951930 69952137 -25320514 - B3 SINE B2 0 216 5 6 1118 1424 274 70 100 chr17 69952137 69952615 -25320036 - MTE2b-int LTR MaLR -191 1389 914 6 1118 260 206 63 0 chr17 69952616 69952679 -25319972 - Lx7 LINE L1 -215 7481 7415 6 1118 404 63 32 0 chr17 69952679 69952742 -25319909 + (TAGA)n Simple_repeat Simple_repeat 4 68 0 6 1118 331 95 0 0 chr17 69952742 69952784 -25319867 - Lx6 LINE L1 -350 7110 7069 6 1118 890 113 11 0 chr17 69952798 69952975 -25319676 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 6 1118 739 284 16 83 chr17 69953018 69953271 -25319380 - MTE2b-int LTR MaLR -623 957 722 6 1118 622 232 16 23 chr17 69953242 69953370 -25319281 - ORR1D2 LTR MaLR -243 127 1 6 1118 327 132 24 24 chr17 69953592 69953626 -25319025 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 6 1118 881 157 57 7 chr17 69953626 69953767 -25318884 + B1_Mur3 SINE Alu 1 148 -1 6 1118 327 132 24 24 chr17 69953767 69953817 -25318834 + (CAAA)n Simple_repeat Simple_repeat 4 53 0 6 1118 561 119 0 0 chr17 69953834 69953935 -25318716 + (CAA)n Simple_repeat Simple_repeat 2 102 0 6 1118 572 291 36 49 chr17 69955476 69955700 -25316951 + ID_B1 SINE B4 1 221 -3 6 1118 674 65 0 3 chr17 69955837 69955925 -25316726 + L1_Mm LINE L1 5524 5638 -721 6 1118 1014 141 0 0 chr17 69956025 69956195 -25316456 + (TCCA)n Simple_repeat Simple_repeat 3 172 0 6 1118 1034 144 0 6 chr17 69957571 69957752 -25314899 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 6 1118 620 58 11 0 chr17 69957752 69957833 -25314818 + (TC)n Simple_repeat Simple_repeat 2 83 0 6 1118 7506 84 25 9 chr17 69957834 69957846 -25314805 - L1_Mus3 LINE L1 -2 6636 6625 6 1118 1145 64 28 7 chr17 69957846 69957988 -25314663 - B1_Mm SINE Alu 0 147 3 6 1118 7506 93 20 7 chr17 69957988 69959315 -25313336 - L1_Mus3 LINE L1 -14 6624 5280 6 1118 33198 73 4 3 chr17 69959330 69964412 -25308239 - L1Md_F2 LINE L1 -14 6568 1478 6 1118 651 279 73 18 chr17 69965978 69966197 -25306454 + MTD LTR MaLR 18 248 -171 6 1118 6602 171 72 12 chr17 69966197 69967460 -25305191 - Lx2B LINE L1 -5 6995 5657 6 1118 352 253 49 0 chr17 69967460 69967572 -25305079 + MTD LTR MaLR 259 379 -42 6 1118 594 200 180 9 chr17 69968020 69968202 -25304449 - Lx2B LINE L1 -206 6791 6576 6 1118 1502 249 113 76 chr17 69971185 69971698 -25300953 - MT2A LTR ERVL 0 533 2 6 1118 294 29 0 0 chr17 69972296 69972331 -25300320 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1118 738 283 11 0 chr17 69972331 69972522 -25300129 + Tigger5 DNA MER2_type 2213 2405 -1 6 1118 457 167 0 0 chr17 69972572 69972650 -25300001 + MTC LTR MaLR 1 78 -343 6 1118 593 65 0 13 chr17 69972650 69972728 -25299923 + Lx2 LINE L1 5772 5848 -1149 6 1118 4750 178 14 6 chr17 69973188 69973993 -25298658 + Lx LINE L1 5843 6653 -1 6 1118 1830 171 7 0 chr17 69973996 69974295 -25298356 + MTC LTR MaLR 68 368 -53 6 1118 331 236 72 182 chr17 69974328 69974509 -25298142 + RMER15 LTR ERVL 1 161 -414 6 1118 592 293 143 20 chr17 69974507 69974758 -25297893 + RMER15 LTR ERVL 275 556 -19 6 1118 219 188 20 20 chr17 69975173 69975222 -25297429 + GA-rich Low_complexity Low_complexity 3 51 0 6 1118 352 287 249 46 chr17 69975466 69975842 -25296809 - Lx8 LINE L1 -365 7108 6657 6 1118 216 0 0 0 chr17 69976047 69976071 -25296580 + (TA)n Simple_repeat Simple_repeat 2 25 0 6 1118 212 255 0 0 chr17 69976091 69976138 -25296513 - B1F1 SINE Alu -9 140 94 6 1118 310 300 124 6 chr17 69976174 69976335 -25296316 - L1M3 LINE L1 -412 5777 5598 6 1118 278 309 0 0 chr17 69976454 69976538 -25296113 - L1M4c LINE L1 -6207 177 94 6 1118 8165 50 3 0 chr17 69976556 69978182 -25294469 - L1Md_F2 LINE L1 0 6582 4952 6 1118 447 254 69 69 chr17 69979012 69979156 -25293495 - B1_Mur1 SINE Alu -1 148 5 6 1118 648 283 78 21 chr17 69979519 69979710 -25292941 + ID_B1 SINE B4 23 224 0 6 1118 1003 103 0 25 chr17 69980442 69980680 -25291971 + (GA)n Simple_repeat Simple_repeat 1 232 0 6 1118 246 242 10 31 chr17 69981620 69981718 -25290933 + (TTAA)n Simple_repeat Simple_repeat 2 97 0 6 1118 1714 293 82 61 chr17 69981764 69982615 -25290036 - Lx8 LINE L1 -72 7401 6533 6 1118 1082 69 112 6 chr17 69982815 69982976 -25289675 + RLTR44C LTR ERVK 300 477 -25 6 1118 4259 97 11 21 chr17 69982985 69983609 -25289042 - Lx3_Mus LINE L1 -475 6534 5917 6 1118 2689 101 53 0 chr17 69983617 69984119 -25288532 - Lx3C LINE L1 -858 6118 5543 6 1118 5190 98 9 15 chr17 69984118 69984898 -25287753 + Lx3C LINE L1 4791 5600 -562 6 1118 2211 216 43 9 chr17 69985315 69985758 -25286893 + Lx4B LINE L1 6590 7047 -11 6 1118 1642 267 81 22 chr17 69986425 69986969 -25285682 - Lx8 LINE L1 -3 7470 6895 6 1118 261 198 136 0 chr17 69986977 69987058 -25285593 + PB1D10 SINE Alu 21 112 -5 6 1118 183 42 0 0 chr17 69987062 69987086 -25285565 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 6 1118 4957 137 23 12 chr17 69988646 69989617 -25283034 - Lx4B LINE L1 -1037 6021 5025 6 1118 2447 186 13 13 chr17 69989613 69990066 -25282585 + Lx4B LINE L1 6024 6476 -582 6 1118 587 101 0 0 chr17 69990064 69990143 -25282508 - Lx5 LINE L1 -526 6524 6446 6 1118 501 61 24 12 chr17 69991234 69991317 -25281334 + (TG)n Simple_repeat Simple_repeat 1 84 0 6 1118 281 271 0 0 chr17 69991326 69991385 -25281266 - B3A SINE B2 -139 59 1 6 1118 191 312 0 0 chr17 69991981 69992029 -25280622 - MIRb SINE MIR -170 98 51 6 1118 189 0 0 0 chr17 69992380 69992401 -25280250 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 6 1119 232 279 169 32 chr17 69992534 69992723 -25279928 - Tigger7 DNA MER2_type -54 2437 2223 6 1119 947 328 28 28 chr17 69992744 69993099 -25279552 - Tigger7 DNA MER2_type -2114 377 23 6 1119 567 78 0 0 chr17 69993473 69993550 -25279101 + (TCCC)n Simple_repeat Simple_repeat 4 80 0 6 1119 5596 125 47 10 chr17 69993993 69994905 -25277746 + L1_Mur2 LINE L1 4808 5753 -124 7 1119 1724 245 88 19 chr17 69994887 69995615 -25277036 - L1_Rod LINE L1 -1741 4399 3594 7 1119 351 156 0 0 chr17 69995642 69995706 -25276945 - L1_Rod LINE L1 -2426 3421 3358 7 1119 2135 230 62 49 chr17 69995709 69996467 -25276184 - L1_Rod LINE L1 -2673 3174 2407 7 1119 9062 80 18 10 chr17 69996474 69998474 -25274177 - L1_Mus1 LINE L1 -1 6566 4558 7 1119 7596 96 4 3 chr17 69998471 69999511 -25273140 + L1_Mus3 LINE L1 5597 6637 -1 7 1119 332 281 57 103 chr17 69999549 69999779 -25272872 + L1VL1 LINE L1 61 409 -6013 7 1119 425 262 19 45 chr17 69999838 69999994 -25272657 + L1Md_F LINE L1 578 729 -5790 7 1119 3419 107 20 5 chr17 70000002 70001083 -25271568 + L1Md_F LINE L1 643 1751 -4135 1 1119 2775 209 83 56 chr17 70001085 70001372 -25271279 - L1_Rod LINE L1 -3432 2415 2116 2 1119 180 0 0 0 chr17 70001372 70001392 -25271259 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 1119 2775 209 83 56 chr17 70001392 70001543 -25271108 - L1_Rod LINE L1 -3732 2115 1965 2 1119 1235 40 0 13 chr17 70001543 70001693 -25270958 - B1_Mus1 SINE Alu 0 148 1 4 1119 2775 209 83 56 chr17 70001693 70002286 -25270365 - L1_Rod LINE L1 -3883 1964 1355 2 1119 437 279 71 40 chr17 70002297 70002521 -25270130 - Lx6 LINE L1 -104 7356 7126 5 1119 1513 275 51 91 chr17 70002530 70003460 -25269191 - L1_Rod LINE L1 -4458 1389 497 2 1119 353 323 46 23 chr17 70004059 70004189 -25268462 - L1MEg LINE L1 -5863 221 89 6 1119 24 0 0 0 chr17 70004310 70004334 -25268317 + AT_rich Low_complexity Low_complexity 1 24 0 7 1119 22 0 0 0 chr17 70004559 70004581 -25268070 + AT_rich Low_complexity Low_complexity 1 22 0 8 1119 328 354 99 19 chr17 70004672 70004934 -25267717 - L1MD2 LINE L1 -3476 3068 2786 9 1119 1281 103 27 0 chr17 70005029 70005214 -25267437 - B2_Mm2 SINE B2 -5 190 1 1 1119 359 316 42 11 chr17 70005423 70005612 -25267039 - L1MB4 LINE L1 -2177 4564 4370 1 1119 212 191 0 21 chr17 70005652 70005700 -25266951 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 1119 2374 278 84 7 chr17 70005725 70006650 -25266001 + Lx6 LINE L1 6156 7349 -111 1 1119 414 0 0 0 chr17 70006688 70006734 -25265917 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 1119 242 229 35 35 chr17 70006989 70007075 -25265576 - L1MB4 LINE L1 -6037 570 485 1 1119 768 75 14 29 chr17 70007317 70007482 -25265169 - L1Md_F3 LINE L1 0 6584 6439 1 1119 274 339 67 9 chr17 70007827 70008050 -25264601 - L1MD2 LINE L1 -5592 955 720 9 1119 4272 61 2 9 chr17 70008577 70009123 -25263528 - L1_Mus1 LINE L1 0 6567 6026 1 1119 2478 97 6 0 chr17 70009123 70009484 -25263167 + L1_Mm LINE L1 5519 5881 -2 1 1119 747 249 86 36 chr17 70009559 70009819 -25262832 - Lx3C LINE L1 -1 6996 6718 1 1119 25 51 0 0 chr17 70009921 70009960 -25262691 + AT_rich Low_complexity Low_complexity 1 39 0 1 1119 2517 239 94 1 chr17 70010256 70010906 -25261745 + RMER1C Other Other 515 1224 -118 2 1119 308 270 0 8 chr17 70010907 70011034 -25261617 + CT-rich Low_complexity Low_complexity 2 127 0 2 1119 594 164 0 0 chr17 70011240 70011350 -25261301 - Lx4B LINE L1 -1037 6021 5912 2 1119 202 279 0 0 chr17 70011366 70011409 -25261242 + polypyrimidine Low_complexity Low_complexity 3 45 0 2 1119 402 300 143 28 chr17 70011480 70011696 -25260955 - B4A SINE B4 -41 251 11 2 1119 1140 196 14 14 chr17 70011859 70012081 -25260570 - URR1B DNA MER1_type -3 222 1 2 1119 423 0 0 0 chr17 70012137 70012184 -25260467 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1119 507 33 0 0 chr17 70012265 70012326 -25260325 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1119 3496 186 37 10 chr17 70012379 70013081 -25259570 + Lx2B LINE L1 6276 6996 -4 2 1119 214 297 51 51 chr17 70013478 70013556 -25259095 - B3A SINE B2 -119 79 2 2 1119 22 0 0 0 chr17 70013825 70013847 -25258804 + AT_rich Low_complexity Low_complexity 1 22 0 3 1119 955 248 0 18 chr17 70014062 70014288 -25258363 - RLTR14 LTR ERV1 0 382 161 3 1119 401 172 11 0 chr17 70014589 70014682 -25257969 + (ATG)n Simple_repeat Simple_repeat 3 96 0 3 1119 23394 120 32 28 chr17 70015311 70020194 -25252457 - L1_Mus3 LINE L1 -3 6635 1728 3 1119 719 206 10 82 chr17 70020192 70020388 -25252263 - L1VL1 LINE L1 -6045 377 196 3 1119 280 305 110 108 chr17 70021897 70022313 -25250338 - MLT1H LTR MaLR -20 529 30 3 1119 223 295 84 28 chr17 70022717 70022860 -25249791 + MIRb SINE MIR 118 268 0 3 1119 1919 127 16 16 chr17 70023285 70023597 -25249054 - Lx4A LINE L1 -4 7054 6743 3 1119 1256 145 61 9 chr17 70025114 70025344 -25247307 + Lx5 LINE L1 6335 6576 -474 3 1119 1636 173 16 35 chr17 70025344 70025661 -25246990 + Lx5 LINE L1 6737 7047 -3 3 1119 378 362 48 24 chr17 70025740 70025992 -25246659 - L1MCc LINE L1 -6059 364 107 3 1119 669 25 0 0 chr17 70026020 70026099 -25246552 + (TTCC)n Simple_repeat Simple_repeat 2 80 0 4 1119 195 69 0 0 chr17 70026101 70026130 -25246521 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 4 1119 234 259 47 58 chr17 70026759 70026845 -25245806 + MLT1A1 LTR MaLR 320 404 -4 4 1119 887 176 0 26 chr17 70027200 70027352 -25245299 - B1_Mur2 SINE Alu 0 149 2 4 1119 245 290 19 29 chr17 70027599 70027702 -25244949 - RMER1C Other Other 0 1342 1241 4 1119 734 308 46 19 chr17 70027788 70028159 -25244492 - Lx8 LINE L1 -204 7269 6889 4 1119 280 230 7 29 chr17 70028161 70028300 -25244351 + (TATG)n Simple_repeat Simple_repeat 1 136 0 4 1119 525 217 11 6 chr17 70028276 70028452 -25244199 + (TG)n Simple_repeat Simple_repeat 2 178 0 4 1119 304 176 24 0 chr17 70028464 70028529 -25244122 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 1119 207 0 0 0 chr17 70028529 70028552 -25244099 + (GA)n Simple_repeat Simple_repeat 1 23 0 4 1119 304 176 24 0 chr17 70028552 70028571 -25244080 + (TG)n Simple_repeat Simple_repeat 1 19 0 4 1119 1081 305 22 20 chr17 70029664 70030022 -25242629 - ORR1E LTR MaLR 0 359 1 5 1119 382 353 106 22 chr17 70031412 70031638 -25241013 + MLT1B LTR MaLR 146 390 0 5 1119 420 302 64 50 chr17 70031922 70032204 -25240447 + B4A SINE B4 1 286 -6 5 1119 438 20 0 0 chr17 70032246 70032297 -25240354 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 1119 670 103 0 0 chr17 70033647 70033744 -25238907 - B3 SINE B2 -118 98 2 5 1119 547 325 53 77 chr17 70036128 70036468 -25236183 + MLT1E3 LTR MaLR 291 622 -2 5 1119 259 122 0 0 chr17 70036635 70036676 -25235975 + L1Md_F2 LINE L1 297 337 -6282 5 1119 31621 73 1 1 chr17 70036669 70041599 -25231052 + L1Md_F2 LINE L1 563 5589 -297 5 1119 7997 50 3 0 chr17 70041599 70042580 -25230071 + L1Md_F2 LINE L1 5590 6573 -12 5 1119 408 325 111 37 chr17 70042795 70043186 -25229465 + RMER20B LTR ERVK 111 509 -7 5 1119 23 0 0 0 chr17 70043617 70043640 -25229011 + AT_rich Low_complexity Low_complexity 1 23 0 5 1119 183 220 0 0 chr17 70043919 70043969 -25228682 + (TATATG)n Simple_repeat Simple_repeat 2 51 0 5 1119 2073 126 0 79 chr17 70045438 70045792 -25226859 - ORR1A3 LTR MaLR 0 326 1 6 1119 25 51 0 0 chr17 70046091 70046130 -25226521 + AT_rich Low_complexity Low_complexity 1 39 0 6 1119 2116 192 141 13 chr17 70046169 70046301 -25226350 - Lx9 LINE L1 0 7644 7519 6 1119 342 0 0 0 chr17 70046301 70046339 -25226312 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1119 2116 192 141 13 chr17 70046339 70046761 -25225890 - Lx9 LINE L1 -126 7518 7021 6 1119 389 200 0 0 chr17 70046766 70046836 -25225815 + Lx9 LINE L1 7348 7417 -227 6 1119 384 22 0 0 chr17 70046840 70046885 -25225766 + (TC)n Simple_repeat Simple_repeat 2 46 0 6 1119 426 189 41 0 chr17 70046886 70047008 -25225643 + Lx9 LINE L1 7506 7632 -12 6 1119 669 252 0 0 chr17 70047018 70047157 -25225494 + Lx9 LINE L1 6322 6460 -1184 6 1119 632 130 108 7 chr17 70047158 70047288 -25225363 - ORR1A3 LTR MaLR -202 192 1 6 1119 330 26 0 0 chr17 70047912 70047951 -25224700 + (TTA)n Simple_repeat Simple_repeat 1 39 0 6 1119 22 70 0 0 chr17 70048761 70048804 -25223847 + AT_rich Low_complexity Low_complexity 1 43 0 6 1119 184 59 59 0 chr17 70048922 70048956 -25223695 + (TA)n Simple_repeat Simple_repeat 1 36 0 7 1119 817 277 67 75 chr17 70050776 70051147 -25221504 + MLT1A LTR MaLR 7 374 0 7 1119 253 81 0 0 chr17 70051320 70051357 -25221294 - RMER19C LTR ERVK 0 611 575 7 1119 922 58 7 7 chr17 70051493 70051642 -25221009 - MusHAL1 LINE L1 0 2712 2563 7 1119 1777 82 8 4 chr17 70051642 70051900 -25220751 - L1_Mus3 LINE L1 -6 6632 6374 7 1119 38810 15 2 6 chr17 70051900 70058481 -25214170 - L1Md_A LINE L1 -2 6580 28 7 1119 832 53 481 0 chr17 70058482 70058667 -25213984 - L1_Mus3 LINE L1 -254 6384 6111 7 1119 1721 259 14 58 chr17 70058667 70059151 -25213500 - RMER19C LTR ERVK -14 597 135 7 1119 260 339 54 62 chr17 70059264 70059506 -25213145 + MT2B2 LTR ERVL 18 257 -327 7 1119 251 167 42 0 chr17 70061462 70061510 -25211141 - ID_B1 SINE B4 0 224 175 7 1119 228 211 51 68 chr17 70061484 70061601 -25211050 + RMER17C LTR ERVK 163 277 -133 7 1119 291 341 34 0 chr17 70061596 70061684 -25210967 - PB1D10 SINE Alu -26 91 1 7 1119 23 33 0 0 chr17 70061692 70061722 -25210929 + AT_rich Low_complexity Low_complexity 1 30 0 8 1119 23 0 0 0 chr17 70061737 70061760 -25210891 + AT_rich Low_complexity Low_complexity 1 23 0 8 1119 359 282 176 41 chr17 70061960 70062130 -25210521 - Tigger5 DNA MER2_type -2213 193 1 8 1119 492 86 0 0 chr17 70062615 70062685 -25209966 + (GAAA)n Simple_repeat Simple_repeat 1 70 0 8 1119 878 48 2 0 chr17 70063404 70063526 -25209125 + B1_Mus2 SINE Alu 23 146 -3 8 1119 207 88 0 0 chr17 70063526 70063560 -25209091 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 8 1119 619 237 0 0 chr17 70063699 70063817 -25208834 - B1_Mm SINE Alu -6 141 24 8 1119 360 257 122 5 chr17 70064454 70064642 -25208009 - L1MC LINE L1 -3111 3035 2826 8 1119 1695 209 58 0 chr17 70065210 70065555 -25207096 + ORR1D1 LTR MaLR 10 374 0 8 1119 4912 223 120 12 chr17 70065555 70066488 -25206163 + ORR1D1-int LTR MaLR 1 980 -390 8 1119 288 0 0 0 chr17 70066488 70066520 -25206131 + (GA)n Simple_repeat Simple_repeat 1 32 0 8 1119 4912 223 120 12 chr17 70066520 70066823 -25205828 + ORR1D1-int LTR MaLR 981 1369 -1 8 1119 1469 240 42 3 chr17 70066823 70067183 -25205468 + ORR1D1 LTR MaLR 1 374 0 8 1119 865 245 63 9 chr17 70067183 70067405 -25205246 - ORR1D-int LTR MaLR -335 1035 802 9 1119 463 341 14 0 chr17 70067877 70068015 -25204636 - ID_B1 SINE B4 -1 223 84 9 1119 321 329 36 12 chr17 70068229 70068395 -25204256 - L1M2 LINE L1 -523 5768 5599 9 1119 3146 88 33 33 chr17 70068488 70068970 -25203681 - RLTR45 LTR ERVK 0 482 1 9 1119 506 313 80 20 chr17 70069137 70069336 -25203315 - B4A SINE B4 0 292 82 9 1119 2203 144 73 3 chr17 70070419 70070787 -25201864 + ORR1B1 LTR MaLR 1 394 0 9 1119 420 306 33 62 chr17 70071061 70071333 -25201318 - MER33 DNA MER1_type -27 297 34 9 1119 1472 161 25 29 chr17 70071633 70071909 -25200742 - RLTR14 LTR ERV1 -97 285 11 9 1119 180 129 191 88 chr17 70073312 70073380 -25199271 + MIRc SINE MIR 73 147 -121 9 1119 5200 57 4 0 chr17 70073383 70074065 -25198586 - L1Md_F2 LINE L1 -245 6337 5653 9 1119 415 125 22 22 chr17 70074065 70074155 -25198496 + L1Md_F3 LINE L1 6492 6581 -3 1 1119 21 36 0 0 chr17 70074165 70074193 -25198458 + AT_rich Low_complexity Low_complexity 1 28 0 1 1119 626 289 54 29 chr17 70075276 70075515 -25197136 - MER2 DNA MER2_type -14 331 87 1 1119 2581 33 13 0 chr17 70077433 70077740 -25194911 + L1_Mus1 LINE L1 6257 6567 0 1 1119 21 0 0 0 chr17 70077878 70077899 -25194752 + AT_rich Low_complexity Low_complexity 1 21 0 1 1119 3253 48 2 2 chr17 70078100 70078496 -25194155 - MTA_Mm LTR MaLR 0 396 1 1 1119 579 340 75 20 chr17 70078771 70079026 -25193625 - B4A SINE B4 0 292 24 1 1119 1443 235 146 67 chr17 70079028 70079068 -25193583 - MT2A LTR ERVL 0 533 496 1 1119 426 20 0 0 chr17 70079068 70079119 -25193532 + (TCTA)n Simple_repeat Simple_repeat 2 52 0 1 1119 1443 235 146 67 chr17 70079119 70079481 -25193170 - MT2A LTR ERVL -38 495 82 1 1119 1126 51 0 0 chr17 70079481 70079618 -25193033 - B1_Mm SINE Alu -9 138 2 1 1119 1443 235 146 67 chr17 70079618 70079706 -25192945 - MT2A LTR ERVL -452 81 3 1 1119 843 64 0 0 chr17 70080083 70080193 -25192458 + (TC)n Simple_repeat Simple_repeat 1 110 0 1 1119 261 0 0 0 chr17 70080193 70080221 -25192430 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1119 315 105 0 0 chr17 70080576 70080633 -25192018 + (GA)n Simple_repeat Simple_repeat 2 58 0 1 1119 312 282 28 0 chr17 70080935 70081006 -25191645 - B4 SINE B4 -219 73 1 1 1119 318 293 18 3 chr17 70081498 70081612 -25191039 - MLT1E1 LTR MaLR -102 552 433 1 1119 334 269 106 31 chr17 70081650 70081811 -25190840 - MLT1E1 LTR MaLR -325 329 157 1 1119 224 335 92 12 chr17 70084102 70084265 -25188386 - L2 LINE L2 -546 2873 2698 1 1119 1043 45 39 6 chr17 70085278 70085434 -25187217 + (GGGA)n Simple_repeat Simple_repeat 1 161 0 1 1119 21 36 0 0 chr17 70086935 70086963 -25185688 + AT_rich Low_complexity Low_complexity 1 28 0 1 1119 2126 176 65 20 chr17 70087320 70087719 -25184932 + MTC LTR MaLR 1 417 -4 1 1119 514 310 118 37 chr17 70087758 70087919 -25184732 - B4 SINE B4 -1 291 118 1 1119 1799 170 112 0 chr17 70088190 70088537 -25184114 - ORR1B1 LTR MaLR -8 386 1 1 1119 236 329 23 47 chr17 70088537 70088620 -25184031 + MLT1D LTR MaLR 111 191 -436 1 1119 364 297 99 50 chr17 70088682 70088884 -25183767 + MLT1D LTR MaLR 292 503 -2 1 1119 315 0 0 0 chr17 70089310 70089345 -25183306 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1119 5043 142 12 8 chr17 70089348 70090290 -25182361 + L1_Mur2 LINE L1 3071 4015 -1862 1 1119 3494 241 45 13 chr17 70090298 70091148 -25181503 + Lx5 LINE L1 6169 7045 -5 1 1119 24686 79 7 6 chr17 70091678 70093127 -25179524 - L1_Mus1 LINE L1 0 6654 5126 1 1119 1039 110 0 20 chr17 70093127 70093275 -25179376 - B1_Mus1 SINE Alu -2 146 2 1 1119 24686 112 11 8 chr17 70093275 70096502 -25176149 - L1_Mus1 LINE L1 -758 5125 1887 1 1119 1177 229 55 33 chr17 70096518 70096880 -25175771 - L1_Mus1 LINE L1 -6043 573 204 1 1119 1599 258 39 15 chr17 70098025 70098434 -25174217 + MTD LTR MaLR 1 419 0 1 1119 4944 37 0 0 chr17 70099282 70099870 -25172781 - L1Md_F3 LINE L1 -14 6570 5983 1 1119 439 329 108 42 chr17 70099877 70100090 -25172561 + MLT1A0 LTR MaLR 67 293 -72 1 1119 339 342 72 47 chr17 70100488 70100681 -25171970 + LTR16D LTR ERVL 259 456 -195 1 1119 776 291 58 8 chr17 70101745 70101988 -25170663 + MTD LTR MaLR 43 297 -122 1 1119 347 255 56 47 chr17 70102260 70102367 -25170284 - PB1D10 SINE Alu 0 117 10 1 1119 247 154 63 179 chr17 70102298 70102393 -25170258 - MT2B2 LTR ERVL -346 238 155 1 1119 303 235 0 0 chr17 70102576 70102674 -25169977 + (CAT)n Simple_repeat Simple_repeat 2 99 0 1 1119 520 274 84 6 chr17 70103066 70103246 -25169405 + B3 SINE B2 2 190 -3 1 1119 5870 77 6 15 chr17 70103475 70104288 -25168363 + RLTR13C2 LTR ERVK 1 978 0 1 1119 1105 246 23 98 chr17 70104345 70104733 -25167918 - Lx9 LINE L1 -335 7309 6951 1 1119 564 152 138 41 chr17 70105082 70105195 -25167456 + B1_Mus1 SINE Alu 14 141 -7 1 1119 619 29 0 47 chr17 70105195 70105302 -25167349 + (CAAAC)n Simple_repeat Simple_repeat 3 104 0 1 1119 255 269 0 37 chr17 70105383 70105464 -25167187 - MTEb LTR MaLR -30 349 272 1 1119 251 291 91 38 chr17 70105525 70105657 -25166994 - MTEb LTR MaLR -216 143 5 1 1119 237 273 0 0 chr17 70107314 70107369 -25165282 - Lx8 LINE L1 -390 7083 7029 1 1119 805 327 74 60 chr17 70107428 70108513 -25164138 - Lx8 LINE L1 -1006 6467 5317 1 1119 225 83 0 0 chr17 70109156 70109192 -25163459 + (A)n Simple_repeat Simple_repeat 1 36 0 1 1119 366 336 113 45 chr17 70109457 70109861 -25162790 - LTR16B LTR ERVL -26 437 1 1 1119 1114 173 4 102 chr17 70110918 70111163 -25161488 - URR1A DNA MER1_type -5 221 1 1 1119 683 333 78 33 chr17 70111733 70112065 -25160586 + ORR1E LTR MaLR 3 349 -10 1 1119 243 103 0 0 chr17 70112880 70112919 -25159732 + (TATG)n Simple_repeat Simple_repeat 2 40 0 1 1119 243 357 164 22 chr17 70113382 70113626 -25159025 - LTR16B LTR ERVL -147 316 33 1 1119 3659 28 2 0 chr17 70113626 70114021 -25158630 + MTA_Mm LTR MaLR 1 396 0 1 1119 243 357 164 22 chr17 70114021 70114051 -25158600 - LTR16B LTR ERVL -431 32 3 1 1119 244 258 0 43 chr17 70114076 70114145 -25158506 - MIR SINE MIR -2 260 195 1 1119 558 279 14 7 chr17 70114199 70114340 -25158311 + B1F SINE Alu 1 142 -7 1 1119 319 288 0 36 chr17 70115147 70115230 -25157421 - RMER20B LTR ERVK -25 602 523 1 1119 1745 240 156 23 chr17 70115231 70115751 -25156900 - RMER20B LTR ERVK -29 598 10 1 1119 259 319 128 8 chr17 70116698 70116815 -25155836 - MIRc SINE MIR -125 143 13 1 1119 776 311 127 38 chr17 70116925 70117396 -25155255 + LTR40a LTR ERVL 7 519 0 1 1119 743 331 51 22 chr17 70117894 70118209 -25154442 + MER2 DNA MER2_type 22 345 0 1 1119 21 0 0 0 chr17 70118918 70118939 -25153712 + AT_rich Low_complexity Low_complexity 1 21 0 1 1119 288 337 108 22 chr17 70119016 70119201 -25153450 - MIRb SINE MIR -36 232 32 1 1119 429 129 0 0 chr17 70120890 70120960 -25151691 + (TCC)n Simple_repeat Simple_repeat 3 72 0 1 1119 583 285 0 0 chr17 70121388 70121518 -25151133 + ORR1E LTR MaLR 1 130 -229 1 1119 1268 295 21 11 chr17 70121949 70122322 -25150329 - MTEa LTR MaLR -1 378 2 1 1119 260 270 10 101 chr17 70122661 70122760 -25149891 + ORR1E LTR MaLR 269 358 -1 1 1119 306 134 0 0 chr17 70123251 70123318 -25149333 + (TC)n Simple_repeat Simple_repeat 2 68 0 1 139 817 335 15 15 chr17 70123365 70123638 -25149013 - B4A SINE B4 0 292 20 1 1120 315 394 8 0 chr17 70123667 70123799 -25148852 - MIR SINE MIR -101 161 29 1 1120 798 192 20 0 chr17 70124600 70124746 -25147905 + ORR1B2 LTR MaLR 219 367 0 1 1120 238 327 167 26 chr17 70124886 70125156 -25147495 - L2a LINE L2 -164 3262 2955 1 1120 841 144 254 6 chr17 70125334 70125515 -25147136 + URR1A DNA MER1_type 1 226 0 1 1120 182 116 23 0 chr17 70126129 70126172 -25146479 + (TTTTTA)n Simple_repeat Simple_repeat 3 46 0 1 1120 3457 137 96 0 chr17 70126187 70126740 -25145911 - Lx LINE L1 -4 6650 6045 1 1120 461 326 61 17 chr17 70126881 70127062 -25145589 - MTE-int LTR MaLR -1137 443 255 1 1120 349 301 53 18 chr17 70127067 70127236 -25145415 - L1MEf LINE L1 -4892 1308 1134 1 1120 209 30 61 0 chr17 70127332 70127365 -25145286 + (TTTTA)n Simple_repeat Simple_repeat 3 37 0 1 1120 509 271 25 0 chr17 70128198 70128316 -25144335 - B1F2 SINE Alu -25 124 4 1 1120 181 289 51 26 chr17 70128823 70128901 -25143750 + L2b LINE L2 3040 3119 -256 1 1120 231 236 0 33 chr17 70129680 70129772 -25142879 + (CAGA)n Simple_repeat Simple_repeat 1 89 0 1 1120 29 60 0 0 chr17 70130367 70130417 -25142234 + AT_rich Low_complexity Low_complexity 1 50 0 1 1120 697 197 53 76 chr17 70130685 70130910 -25141741 + Lx9 LINE L1 7424 7643 -1 1 1120 9054 7 0 0 chr17 70132986 70134072 -25138579 - L1Md_A LINE L1 0 6582 5497 1 1120 599 263 80 30 chr17 70134978 70135241 -25137410 + L1MC LINE L1 4862 5137 -1009 1 1120 4309 171 116 19 chr17 70136080 70136984 -25135667 + RLTR25B LTR ERVK 37 1028 0 1 1120 985 266 58 117 chr17 70138553 70138978 -25133673 - L1MC1 LINE L1 -4 6329 5894 1 1120 2563 30 74 0 chr17 70138978 70139276 -25133375 - L1Md_A LINE L1 0 6582 6263 1 1120 985 266 58 117 chr17 70139276 70139489 -25133162 - L1MC1 LINE L1 -440 5893 5729 1 1120 1714 137 33 2 chr17 70139741 70140230 -25132421 - Lx4A LINE L1 -229 6829 6299 1 1120 1382 159 40 8 chr17 70140230 70140477 -25132174 + Lx4A LINE L1 6798 7052 -6 1 1120 33 0 0 0 chr17 70140484 70140517 -25132134 + AT_rich Low_complexity Low_complexity 1 33 0 1 1120 555 236 16 8 chr17 70140789 70140913 -25131738 + RMER20B LTR ERVK 1 125 -502 1 1120 21 0 0 0 chr17 70141606 70141627 -25131024 + AT_rich Low_complexity Low_complexity 1 21 0 1 1120 34374 74 18 6 chr17 70141711 70144218 -25128433 - L1Md_F2 LINE L1 -1 6581 4065 1 1120 2099 128 84 9 chr17 70144218 70144550 -25128101 - IAPEY2_LTR LTR ERVK 0 357 1 1 1120 34374 87 20 7 chr17 70144550 70148176 -25124475 - L1Md_F2 LINE L1 -1819 4064 367 1 1120 1842 58 33 8 chr17 70148709 70148953 -25123698 - L1_Mus3 LINE L1 -7 6631 6382 1 1120 272 273 67 67 chr17 70149722 70149887 -25122764 + Lx8 LINE L1 7226 7390 -83 1 1120 22 35 0 0 chr17 70150446 70150475 -25122176 + AT_rich Low_complexity Low_complexity 1 29 0 1 1120 1009 168 33 6 chr17 70150542 70150722 -25121929 + ORR1D1 LTR MaLR 3 187 -187 1 1120 4036 209 76 5 chr17 70150942 70151863 -25120788 - Lx9 LINE L1 -34 7610 6625 1 1120 1592 339 45 26 chr17 70151909 70152886 -25119765 - L1_Mur3 LINE L1 -13 5867 4872 1 1120 2666 320 53 27 chr17 70152904 70154018 -25118633 - Lx8 LINE L1 0 7473 6331 1 1120 189 94 0 0 chr17 70154056 70154088 -25118563 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1 1120 357 260 14 0 chr17 70154092 70154165 -25118486 - ID4 SINE ID -9 74 1 1 1120 283 204 0 0 chr17 70154722 70154776 -25117875 - Lx3B LINE L1 0 6973 6920 1 1120 236 30 0 29 chr17 70154806 70154840 -25117811 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 1 1120 1255 242 123 123 chr17 70154855 70154986 -25117665 + RMER17B LTR ERVK 267 415 -543 1 1120 640 43 22 0 chr17 70154986 70155078 -25117573 + (TC)n Simple_repeat Simple_repeat 2 95 0 2 1120 1255 242 123 123 chr17 70155078 70155638 -25117013 + RMER17B LTR ERVK 416 957 -1 1 1120 1030 130 0 11 chr17 70155744 70155923 -25116728 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 2 1120 1227 42 0 20 chr17 70155935 70155947 -25116704 - B1_Mus2 SINE Alu 0 147 138 2 1120 234 0 0 0 chr17 70155947 70155973 -25116678 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 2 1120 1227 42 0 20 chr17 70155973 70156106 -25116545 - B1_Mus2 SINE Alu -10 137 5 2 1120 6969 91 26 22 chr17 70156629 70158178 -25114473 - L1_Mus2 LINE L1 0 6566 5021 2 1120 3107 41 57 0 chr17 70158178 70158545 -25114106 - RLTR10 LTR ERVK -2 388 1 2 1120 6433 112 18 9 chr17 70158545 70158624 -25114027 - L1_Mus2 LINE L1 -863 5020 4929 2 1120 11001 155 52 28 chr17 70159853 70162920 -25109731 + Lx5 LINE L1 3883 7050 0 2 1120 408 20 0 0 chr17 70163326 70163375 -25109276 + (TCCA)n Simple_repeat Simple_repeat 2 50 0 2 1120 28865 26 4 6 chr17 70163980 70169966 -25102685 - L1Md_T LINE L1 -1 6581 624 2 1120 410 192 124 9 chr17 70169967 70170072 -25102579 - B4A SINE B4 -59 233 117 2 1120 337 308 105 12 chr17 70170184 70170355 -25102296 + MLT2B4 LTR ERVL 364 550 -6 2 1120 180 77 0 0 chr17 70171841 70171867 -25100784 + (A)n Simple_repeat Simple_repeat 1 26 0 2 1120 339 86 179 19 chr17 70172963 70173055 -25099596 + Lx2 LINE L1 6898 6999 -1 2 1120 291 382 55 22 chr17 70173647 70173829 -25098822 - MLT1H-int LTR MaLR -516 893 706 2 1120 240 264 40 40 chr17 70174768 70175017 -25097634 + RMER17D LTR ERVK 187 435 -454 2 1120 268 403 45 0 chr17 70174998 70175132 -25097519 - ID_B1 SINE B4 -84 140 1 2 1120 549 323 75 94 chr17 70175213 70175531 -25097120 - MTE2b LTR MaLR -67 312 1 2 1120 855 327 91 146 chr17 70175532 70175689 -25096962 - MTE2b-int LTR MaLR -12 1358 1259 2 1120 836 225 17 111 chr17 70175689 70175924 -25096727 + B3 SINE B2 2 214 -2 2 1120 2925 305 99 41 chr17 70175924 70177200 -25095451 - MTE2b-int LTR MaLR -112 1258 1 2 1120 1008 296 97 12 chr17 70177200 70177521 -25095130 - MTE2b LTR MaLR 0 379 32 2 1120 270 281 77 12 chr17 70177569 70177738 -25094913 - L1M4b LINE L1 -3292 3714 3535 2 1120 2245 102 22 6 chr17 70177849 70178173 -25094478 + ORR1A4 LTR MaLR 1 329 0 2 1120 1596 31 0 20 chr17 70178253 70178448 -25094203 - B2_Mm1a SINE B2 -1 192 2 2 1120 324 218 46 0 chr17 70178551 70178638 -25094013 + (TCTG)n Simple_repeat Simple_repeat 2 92 0 2 1120 8124 145 36 8 chr17 70179277 70180848 -25091803 - Lx4B LINE L1 -11 7047 5449 2 1120 2511 207 78 5 chr17 70180839 70181442 -25091209 - Lx4B LINE L1 -6011 1075 429 2 1120 322 35 69 0 chr17 70181574 70181632 -25091019 - L1Md_F3 LINE L1 0 6584 6523 2 1120 252 240 136 32 chr17 70181643 70181768 -25090883 - L1M4b LINE L1 -5106 2228 2091 2 1120 227 160 20 0 chr17 70182289 70182339 -25090312 - L1M4b LINE L1 -5795 1539 1489 2 1120 441 0 0 0 chr17 70182429 70182478 -25090173 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 2 1120 1533 248 58 5 chr17 70182484 70182894 -25089757 - Lx9 LINE L1 -179 7465 7034 2 1120 476 226 20 7 chr17 70184395 70184542 -25088109 - Lx9 LINE L1 -7 7637 7489 2 1120 480 319 34 10 chr17 70184972 70185178 -25087473 - Lx8 LINE L1 -155 7318 7108 2 1120 578 78 0 0 chr17 70185553 70185630 -25087021 + L1Md_F2 LINE L1 5510 5586 -297 2 1120 7817 49 11 2 chr17 70185630 70186614 -25086037 + L1Md_F2 LINE L1 5587 6579 -3 2 1120 381 332 160 36 chr17 70186979 70187229 -25085422 + B4A SINE B4 1 281 -11 2 1120 288 77 0 0 chr17 70187232 70187271 -25085380 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 1120 278 139 56 0 chr17 70189118 70189190 -25083461 + (TA)n Simple_repeat Simple_repeat 2 77 0 2 1120 283 310 11 0 chr17 70189230 70189317 -25083334 + (CATATA)n Simple_repeat Simple_repeat 2 89 0 2 1120 360 343 0 7 chr17 70189453 70189591 -25083060 - Lx8 LINE L1 -1150 6323 6187 2 1120 251 241 0 124 chr17 70189746 70189940 -25082711 + (CACCAT)n Simple_repeat Simple_repeat 4 173 0 2 1120 645 249 126 6 chr17 70189947 70190449 -25082202 - L1M4 LINE L1 -716 5468 4899 2 1120 23 0 0 0 chr17 70191273 70191296 -25081355 + AT_rich Low_complexity Low_complexity 1 23 0 2 1120 1182 265 124 16 chr17 70191301 70191947 -25080704 + L1M4 LINE L1 5100 5818 -365 2 1120 1087 35 35 0 chr17 70191958 70192099 -25080552 + B1_Mm SINE Alu 2 147 0 2 1120 1905 172 15 0 chr17 70192223 70192565 -25080086 - Lx LINE L1 0 6654 6308 2 1120 634 218 227 11 chr17 70192711 70192887 -25079764 - B3 SINE B2 0 216 3 2 1120 399 41 0 0 chr17 70193049 70193098 -25079553 + (CATA)n Simple_repeat Simple_repeat 3 51 0 2 1120 812 92 28 0 chr17 70193182 70193323 -25079328 + (TC)n Simple_repeat Simple_repeat 2 146 0 2 1120 500 291 35 21 chr17 70193341 70193485 -25079166 + B1_Mur1 SINE Alu 2 147 -2 2 1120 275 273 15 0 chr17 70193664 70193730 -25078921 + ID4 SINE ID 1 67 -16 2 1120 342 0 0 0 chr17 70193750 70193788 -25078863 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1120 384 22 0 0 chr17 70194310 70194355 -25078296 + (TTCTC)n Simple_repeat Simple_repeat 1 45 0 2 1120 1147 97 0 11 chr17 70194355 70194533 -25078118 + (TTTTC)n Simple_repeat Simple_repeat 3 178 0 2 1120 506 16 0 16 chr17 70194534 70194598 -25078053 + (TTTC)n Simple_repeat Simple_repeat 2 64 0 2 1120 2035 142 9 3 chr17 70194733 70195052 -25077599 - Lx2 LINE L1 0 6997 6677 2 1120 465 214 0 0 chr17 70195148 70195251 -25077400 + (TA)n Simple_repeat Simple_repeat 2 104 0 2 1120 2279 75 6 33 chr17 70195251 70195581 -25077070 - L1_Mus3 LINE L1 -16 6622 6302 2 1120 557 99 0 0 chr17 70195581 70195662 -25076989 + L1_Mus3 LINE L1 6197 6277 -361 2 1120 432 0 0 0 chr17 70196316 70196364 -25076287 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1120 337 260 86 64 chr17 70196676 70196816 -25075835 - MER20 DNA MER1_type -30 189 47 2 1120 393 22 0 0 chr17 70196950 70196996 -25075655 + (TTG)n Simple_repeat Simple_repeat 3 48 0 2 1120 301 281 130 16 chr17 70198352 70198475 -25074176 - MLT1A LTR MaLR 0 374 238 2 1120 348 258 0 0 chr17 70198476 70198600 -25074051 + (TG)n Simple_repeat Simple_repeat 1 124 0 2 1120 575 281 51 122 chr17 70198612 70198924 -25073727 - B4A SINE B4 0 292 3 2 1120 620 257 0 0 chr17 70200758 70200898 -25071753 - Lx5 LINE L1 -290 6760 6621 2 1120 236 254 16 16 chr17 70200951 70201015 -25071636 - MT-int LTR MaLR -615 483 420 2 1120 5462 157 26 15 chr17 70201032 70202042 -25070609 + Lx5 LINE L1 5587 6607 -443 2 1120 207 0 0 0 chr17 70202056 70202079 -25070572 + (CAAA)n Simple_repeat Simple_repeat 3 25 0 2 1120 37 0 0 0 chr17 70203842 70203879 -25068772 + AT_rich Low_complexity Low_complexity 1 37 0 2 1120 298 287 32 65 chr17 70205013 70205136 -25067515 + PB1D7 SINE Alu 2 120 0 2 1120 290 214 44 88 chr17 70205756 70205767 -25066884 - RLTR25B LTR ERVK -480 548 538 2 1120 2655 48 37 69 chr17 70205767 70206144 -25066507 - RLTR10B2 LTR ERVK 0 365 1 2 1120 290 214 44 88 chr17 70206144 70206245 -25066406 - RLTR25B LTR ERVK -491 537 442 2 1120 1043 53 0 0 chr17 70206145 70206276 -25066375 - B1_Mus2 SINE Alu -8 139 9 2 1120 369 0 0 0 chr17 70206504 70206545 -25066106 + (TTG)n Simple_repeat Simple_repeat 2 42 0 2 1120 351 98 0 0 chr17 70207227 70207288 -25065363 + (TC)n Simple_repeat Simple_repeat 2 62 0 2 1120 600 0 12 24 chr17 70207288 70207370 -25065281 + (TCTCC)n Simple_repeat Simple_repeat 1 81 0 2 1120 454 341 53 110 chr17 70207788 70208088 -25064563 + B4 SINE B4 3 285 -7 2 1120 315 65 0 0 chr17 70208151 70208197 -25064454 + (TC)n Simple_repeat Simple_repeat 2 47 0 2 1120 420 20 0 0 chr17 70208197 70208246 -25064405 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1120 359 262 55 0 chr17 70208704 70208849 -25063802 + L1M5 LINE L1 5005 5157 -989 2 1120 326 351 60 56 chr17 70208940 70209224 -25063427 + L1M5 LINE L1 5262 5546 -694 2 1120 436 307 148 5 chr17 70209542 70209745 -25062906 - MLT1A0 LTR MaLR -23 342 111 2 1120 211 353 45 45 chr17 70210098 70210187 -25062464 - PB1D10 SINE Alu -26 91 3 2 1120 450 318 31 0 chr17 70210187 70210250 -25062401 - ID SINE ID -138 86 20 2 1120 255 200 91 0 chr17 70210201 70210256 -25062395 - ID4 SINE ID -15 68 9 2 1120 511 196 101 36 chr17 70210304 70210442 -25062209 + B1F SINE Alu 3 149 0 2 1120 426 39 0 0 chr17 70211254 70211306 -25061345 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 1120 2018 310 49 45 chr17 70212355 70213246 -25059405 + Lx8 LINE L1 6231 7125 -348 2 1120 22 0 0 0 chr17 70213548 70213570 -25059081 + AT_rich Low_complexity Low_complexity 1 22 0 2 1120 3166 94 8 22 chr17 70214025 70214516 -25058135 - L1_Mus3 LINE L1 -57 6581 6098 2 1120 184 391 118 37 chr17 70214736 70215057 -25057594 - L2c LINE L2 0 3387 3041 2 1120 262 285 2 134 chr17 70216993 70217109 -25055542 - PB1D10 SINE Alu -8 119 7 2 1120 637 298 40 7 chr17 70218046 70218350 -25054301 + L1MB8 LINE L1 5352 5665 -519 2 1120 282 377 129 26 chr17 70218400 70218555 -25054096 + B4A SINE B4 122 292 0 2 1120 532 243 36 22 chr17 70218632 70218771 -25053880 + B1_Mur1 SINE Alu 1 141 -8 2 1120 473 306 105 30 chr17 70218983 70219384 -25053267 + L1MB8 LINE L1 5701 6131 -47 2 1120 1139 310 72 39 chr17 70219865 70220513 -25052138 + Lx8 LINE L1 6793 7462 -11 2 1120 4772 16 2 0 chr17 70222916 70223542 -25049109 - L1Md_F3 LINE L1 -426 6158 5532 2 1120 3293 63 0 0 chr17 70223543 70223956 -25048695 + L1Md_F3 LINE L1 6171 6583 -1 2 1120 26 0 0 0 chr17 70224848 70224874 -25047777 + AT_rich Low_complexity Low_complexity 1 26 0 2 1120 2058 108 37 0 chr17 70225166 70225462 -25047189 - Lx2 LINE L1 -3 6994 6688 2 1120 23 0 0 0 chr17 70225465 70225488 -25047163 + AT_rich Low_complexity Low_complexity 1 23 0 2 1120 279 0 0 0 chr17 70226953 70226984 -25045667 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1120 201 74 0 0 chr17 70227191 70227218 -25045433 + (TTG)n Simple_repeat Simple_repeat 1 27 0 2 1120 283 311 71 95 chr17 70227401 70227696 -25044955 - MLT2C1 LTR ERVL 0 397 110 2 1120 282 358 90 62 chr17 70227891 70228293 -25044358 - MLT1J LTR MaLR -63 449 37 2 1120 1378 169 62 27 chr17 70228960 70229308 -25043343 - RLTR44C LTR ERVK 0 502 110 2 1120 1099 0 15 0 chr17 70229308 70229439 -25043212 + (TC)n Simple_repeat Simple_repeat 1 133 0 2 1120 1145 194 151 69 chr17 70229439 70229554 -25043097 - RLTR44C LTR ERVK -393 109 2 2 1120 354 298 104 15 chr17 70229959 70230160 -25042491 + RMER12 LTR ERVK 770 988 -334 2 1120 470 216 11 33 chr17 70230194 70230376 -25042275 + (TATATG)n Simple_repeat Simple_repeat 2 179 0 3 1120 1062 142 187 0 chr17 70231841 70232108 -25040543 - Lx9 LINE L1 -2 7642 7326 3 1120 868 212 0 6 chr17 70232104 70232270 -25040381 + Lx9 LINE L1 7117 7281 -363 3 1120 265 299 38 26 chr17 70232599 70232746 -25039905 + MIR SINE MIR 22 173 -103 3 1120 446 261 64 0 chr17 70233504 70233692 -25038959 + L1MB8 LINE L1 4981 5180 -966 3 1120 701 84 33 25 chr17 70233794 70233916 -25038735 + Lx LINE L1 6527 6649 -5 3 1120 310 300 60 0 chr17 70233960 70234060 -25038591 + L1MB8 LINE L1 5351 5456 -723 3 1120 363 318 100 6 chr17 70234090 70234331 -25038320 + L1MB8 LINE L1 5532 5793 -391 3 1120 237 305 0 47 chr17 70234349 70234435 -25038216 - MTE2b LTR MaLR -17 362 281 3 1120 341 324 0 7 chr17 70234661 70234804 -25037847 + L1MB8 LINE L1 5827 5968 -210 3 1120 378 250 75 0 chr17 70234993 70235073 -25037578 + ID_B1 SINE B4 87 172 -52 3 1120 218 56 0 27 chr17 70235174 70235211 -25037440 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 3 1120 375 247 21 0 chr17 70235487 70235584 -25037067 + B3A SINE B2 22 120 -78 3 1120 3014 258 56 37 chr17 70235621 70236687 -25035964 - MTC-int LTR MaLR -19 1239 64 3 1120 852 206 132 5 chr17 70236692 70236882 -25035769 + MTD LTR MaLR 171 384 -35 3 1120 1357 188 156 13 chr17 70237581 70237889 -25034762 - Lx5 LINE L1 0 7050 6699 3 1120 488 257 93 74 chr17 70238386 70238680 -25033971 - ORR1E LTR MaLR 0 379 67 3 1120 298 197 79 0 chr17 70240681 70240757 -25031894 + MLT1A LTR MaLR 25 106 -268 3 1120 4468 62 3 2 chr17 70240815 70241385 -25031266 - L1_Mus3 LINE L1 -7 6631 6061 3 1120 2719 93 36 0 chr17 70241385 70241806 -25030845 - L1_Mm LINE L1 -401 5482 5047 3 1120 3635 68 0 40 chr17 70241806 70242308 -25030343 + L1_Mus2 LINE L1 6085 6566 0 3 1120 335 365 30 56 chr17 70242400 70242670 -25029981 - L1MEe LINE L1 -4049 805 543 3 1120 278 338 52 8 chr17 70242736 70242870 -25029781 + MLT1A0 LTR MaLR 6 145 -220 3 1120 208 143 0 0 chr17 70243168 70243203 -25029448 + (A)n Simple_repeat Simple_repeat 1 35 0 3 1120 436 303 28 7 chr17 70244365 70244508 -25028143 + MLT1A LTR MaLR 4 149 -225 3 1120 265 110 24 35 chr17 70244592 70244677 -25027974 + A-rich Low_complexity Low_complexity 5 88 0 3 1120 25 75 0 0 chr17 70245486 70245539 -25027112 + AT_rich Low_complexity Low_complexity 1 53 0 3 1120 321 47 0 0 chr17 70245750 70245793 -25026858 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1120 2576 118 14 42 chr17 70246419 70246595 -25026056 + Lx4A LINE L1 6639 6815 -243 3 1120 1331 180 167 28 chr17 70246595 70246955 -25025696 + RMER17C LTR ERVK 1 410 0 3 1120 2576 118 14 42 chr17 70246955 70247210 -25025441 + Lx4A LINE L1 6816 7058 0 3 1120 204 40 0 0 chr17 70247347 70247372 -25025279 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1120 28214 30 1 0 chr17 70247406 70251628 -25021023 - L1Md_T LINE L1 0 6582 2357 3 1120 2114 122 0 11 chr17 70251628 70252001 -25020650 - L1Md_Gf LINE L1 -6110 412 44 3 1121 4512 75 3 9 chr17 70254780 70255430 -25017221 - L1_Mur1 LINE L1 -848 5038 4393 3 1121 1216 91 0 0 chr17 70255430 70255605 -25017046 + Lx3_Mus LINE L1 5746 5920 -1089 3 1121 642 98 9 26 chr17 70255605 70255720 -25016931 + (GAAA)n Simple_repeat Simple_repeat 1 113 0 3 1121 7792 85 12 25 chr17 70255720 70256836 -25015815 + Lx3_Mus LINE L1 5908 7009 0 3 1121 2401 177 165 8 chr17 70256950 70257529 -25015122 + Lx4B LINE L1 6313 7027 -31 3 1121 202 77 0 0 chr17 70257535 70257561 -25015090 + (GAAA)n Simple_repeat Simple_repeat 1 26 0 3 1121 414 247 6 33 chr17 70257568 70257912 -25014739 + GA-rich Low_complexity Low_complexity 1 334 0 3 1121 185 405 26 43 chr17 70259427 70259543 -25013108 - L2b LINE L2 -1 3374 3261 3 1121 814 280 9 5 chr17 70259704 70259919 -25012732 + B3 SINE B2 1 216 0 3 1121 269 269 76 0 chr17 70260124 70260243 -25012408 - Lx7 LINE L1 -4 7692 7565 3 1121 761 245 53 14 chr17 70260507 70260714 -25011937 - B3 SINE B2 0 216 2 3 1121 245 204 55 43 chr17 70260721 70260885 -25011766 + (TTATA)n Simple_repeat Simple_repeat 4 169 0 3 1121 235 342 43 77 chr17 70261683 70261800 -25010851 - B1F SINE Alu -31 118 6 3 1121 966 332 84 68 chr17 70262045 70263125 -25009526 - L1MEg LINE L1 -4523 1561 464 3 1121 5168 219 38 59 chr17 70263253 70263578 -25009073 - Lx7 LINE L1 -6 7690 7364 3 1121 590 39 13 0 chr17 70263578 70263655 -25008996 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 3 1121 5168 219 38 59 chr17 70263655 70263692 -25008959 - Lx7 LINE L1 -333 7363 7347 3 1121 989 105 0 0 chr17 70263692 70263825 -25008826 + B1_Mus2 SINE Alu 2 134 -13 3 1121 423 0 0 0 chr17 70263829 70263876 -25008775 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1121 5168 219 38 59 chr17 70263876 70264917 -25007734 - Lx7 LINE L1 -350 7346 6311 3 1121 4032 180 303 90 chr17 70264918 70265271 -25007380 - L1_Mur3 LINE L1 -1961 3919 3484 3 1121 216 24 73 0 chr17 70265271 70265312 -25007339 + (TTG)n Simple_repeat Simple_repeat 1 44 0 3 1121 4032 180 303 90 chr17 70265312 70265807 -25006844 - L1_Mur3 LINE L1 -2397 3483 2766 3 1121 932 121 43 0 chr17 70265807 70265948 -25006703 - B1_Mm SINE Alu 0 147 1 3 1121 4032 180 303 90 chr17 70265948 70266552 -25006099 - L1_Mur3 LINE L1 -2397 2765 1887 3 1121 6722 84 6 85 chr17 70266552 70267634 -25005017 + L1Md_A LINE L1 5587 6582 0 3 1121 4032 191 164 47 chr17 70267634 70269062 -25003589 - L1_Mur3 LINE L1 -3994 1886 388 3 1121 1311 57 34 0 chr17 70269446 70269622 -25003029 - B2_Mm2 SINE B2 -5 190 9 3 1121 352 212 89 22 chr17 70269899 70270037 -25002614 + Lx2B LINE L1 6868 7057 -1 3 1121 349 350 86 41 chr17 70270278 70270546 -25002105 + MLT1F2 LTR MaLR 269 548 -12 3 1121 1926 198 76 6 chr17 70270589 70271137 -25001514 - Lx2B LINE L1 0 6976 6381 3 1121 2779 90 14 19 chr17 70271152 70271573 -25001078 + BGLII LTR ERVK 1 419 -2 3 1121 234 290 9 91 chr17 70272269 70272339 -25000312 + MLT1A1 LTR MaLR 308 376 -32 3 1121 2833 169 9 19 chr17 70272339 70272871 -24999780 + RLTR11A2 LTR ERVK 1 527 0 3 1121 234 290 9 91 chr17 70272871 70272910 -24999741 + MLT1A1 LTR MaLR 377 408 0 3 1121 5525 111 4 2 chr17 70275173 70275970 -24996681 + Lx3A LINE L1 6174 6971 -10 3 1121 189 0 0 0 chr17 70275971 70275992 -24996659 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 3 1121 2413 75 6 0 chr17 70276506 70276826 -24995825 - L1_Mus1 LINE L1 -1 6566 6245 3 1121 199 302 0 0 chr17 70277292 70277345 -24995306 + L2 LINE L2 2043 2095 -1324 3 1121 277 313 30 0 chr17 70278171 70278238 -24994413 + B4A SINE B4 11 79 -213 3 1121 709 106 0 63 chr17 70278238 70278429 -24994222 + (CA)n Simple_repeat Simple_repeat 2 180 0 3 1121 337 20 40 0 chr17 70278520 70278570 -24994081 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1121 5983 75 7 83 chr17 70278608 70279216 -24993435 + Lx3_Mus LINE L1 3787 4393 -1493 3 1121 4754 10 0 0 chr17 70279216 70279709 -24992942 - MT2_Mm LTR ERVL 0 493 1 3 1121 5983 75 7 83 chr17 70279709 70279776 -24992875 + Lx3_Mus LINE L1 4394 4460 -1426 3 1121 1272 61 0 0 chr17 70279776 70279923 -24992728 + B1_Mm SINE Alu 1 147 0 3 1121 5983 75 7 83 chr17 70279923 70280198 -24992453 + Lx3_Mus LINE L1 4461 4666 -1220 3 1121 4930 85 19 6 chr17 70280586 70281222 -24991429 - L1_Mus3 LINE L1 -6 6632 5989 3 1121 9969 75 22 16 chr17 70281229 70282481 -24990170 + Lx3_Mus LINE L1 4656 5911 -1098 3 1121 747 52 0 0 chr17 70282481 70282577 -24990074 + (GAGAA)n Simple_repeat Simple_repeat 4 99 0 3 1121 9969 89 20 17 chr17 70282577 70283685 -24988966 + Lx3_Mus LINE L1 5912 7007 -2 3 1121 840 285 153 8 chr17 70283708 70284101 -24988550 + Lx8 LINE L1 7024 7473 0 3 1121 35 54 0 0 chr17 70284287 70284343 -24988308 + AT_rich Low_complexity Low_complexity 1 56 0 3 1121 2285 56 0 3 chr17 70284343 70284629 -24988022 - L1_Mus3 LINE L1 -707 5931 5647 3 1121 5315 89 3 16 chr17 70284629 70285336 -24987315 + L1_Mus3 LINE L1 5935 6632 -6 3 1121 40 21 0 0 chr17 70285338 70285385 -24987266 + AT_rich Low_complexity Low_complexity 1 47 0 3 1121 354 339 34 49 chr17 70285859 70286064 -24986587 + MLT2F LTR ERVL 201 402 -261 3 1121 794 152 4 0 chr17 70286271 70286524 -24986127 + (CA)n Simple_repeat Simple_repeat 1 254 0 3 1121 333 310 69 12 chr17 70288450 70288623 -24984028 - MLT1-int LTR MaLR -776 595 413 3 1121 886 245 43 109 chr17 70290114 70290463 -24982188 - MT2B LTR ERVL -63 538 177 3 1121 6465 31 3 12 chr17 70290467 70291207 -24981444 + L1Md_F3 LINE L1 5850 6582 -2 3 1121 2061 221 56 8 chr17 70291207 70291690 -24980961 - RLTR11A2 LTR ERVK -21 506 1 3 1121 2532 193 67 40 chr17 70291744 70292343 -24980308 + Tigger1 DNA MER2_type 1005 1619 -799 3 1121 1871 247 114 68 chr17 70292337 70293018 -24979633 - MTD-int LTR MaLR -537 721 9 3 1121 1544 240 57 37 chr17 70293030 70293433 -24979218 - MTD LTR MaLR -8 411 1 3 1121 228 263 38 38 chr17 70293440 70293519 -24979132 + Tigger1 DNA MER2_type 2293 2371 -47 3 1121 1681 190 42 60 chr17 70293547 70293928 -24978723 + ORR1D1 LTR MaLR 1 374 0 3 1121 225 197 12 50 chr17 70295282 70295362 -24977289 + L1M4b LINE L1 1707 1783 -5551 3 1121 1167 221 114 3 chr17 70295471 70295803 -24976848 - Lx9 LINE L1 -15 7629 7261 3 1121 310 238 0 0 chr17 70296219 70296282 -24976369 - Lx9 LINE L1 -400 7244 7182 3 1121 252 0 0 0 chr17 70296692 70296720 -24975931 + (ATG)n Simple_repeat Simple_repeat 3 30 0 3 1121 393 141 0 0 chr17 70296718 70296789 -24975862 + (GGA)n Simple_repeat Simple_repeat 2 72 0 3 1121 3513 176 26 3 chr17 70297165 70298026 -24974625 - Lx4B LINE L1 -811 6247 5368 3 1121 2166 211 85 29 chr17 70298033 70298584 -24974067 + Lx2B LINE L1 6255 6836 -164 3 1121 352 336 108 5 chr17 70298864 70299076 -24973575 + Lx8 LINE L1 6880 7113 -360 3 1121 507 224 48 23 chr17 70299389 70299519 -24973132 - B1F SINE Alu -1 148 15 3 1121 571 299 95 54 chr17 70299642 70300423 -24972228 - L1MC LINE L1 -373 5806 4995 3 1121 380 130 14 0 chr17 70300640 70300709 -24971942 + (TCCC)n Simple_repeat Simple_repeat 4 73 0 3 1121 2444 302 75 19 chr17 70300743 70301604 -24971047 - Lx9 LINE L1 -320 7324 6415 3 1121 351 0 0 0 chr17 70301624 70301663 -24970988 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1121 486 248 68 61 chr17 70301687 70301850 -24970801 - B3 SINE B2 -48 168 5 3 1121 21 0 0 0 chr17 70302616 70302637 -24970014 + AT_rich Low_complexity Low_complexity 1 21 0 3 1121 21 0 0 0 chr17 70302670 70302691 -24969960 + AT_rich Low_complexity Low_complexity 1 21 0 3 1121 861 164 249 12 chr17 70302691 70302864 -24969787 - B3 SINE B2 -2 214 1 3 1121 1141 248 88 36 chr17 70302885 70303215 -24969436 + ORR1E LTR MaLR 1 347 -12 3 1121 2993 26 3 0 chr17 70303294 70303640 -24969011 + MERVL-int LTR ERVL 5014 5360 -125 3 1121 387 167 46 35 chr17 70303640 70303727 -24968924 + ORR1E-int LTR MaLR 553 640 -1323 3 1121 322 0 0 0 chr17 70303727 70303765 -24968886 + MERVL-int LTR ERVL 5448 5485 0 4 1121 1825 5 5 0 chr17 70303765 70303976 -24968675 + MT2_Mm LTR ERVL 1 212 -281 4 1121 449 176 88 0 chr17 70304942 70305044 -24967607 - Lx9 LINE L1 -1 7643 7533 4 1121 313 293 64 7 chr17 70305062 70305203 -24967448 - L1MA6 LINE L1 -18 6282 6134 4 1121 407 188 30 40 chr17 70305197 70305297 -24967354 + L1MA4 LINE L1 5800 5898 -402 4 1121 217 244 46 29 chr17 70305983 70306156 -24966495 + (TATAA)n Simple_repeat Simple_repeat 5 180 0 4 1121 333 0 0 0 chr17 70306171 70306208 -24966443 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1121 569 294 68 82 chr17 70306233 70306526 -24966125 - B4A SINE B4 -3 289 1 4 1121 8577 112 19 2 chr17 70306654 70308516 -24964135 - L1_Mus3 LINE L1 -8 6630 4738 4 1121 219 36 0 0 chr17 70308516 70308544 -24964107 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 4 1121 8577 146 16 4 chr17 70308544 70308810 -24963841 - L1_Mus3 LINE L1 -1146 4737 4475 4 1121 5787 124 7 1 chr17 70308809 70309697 -24962954 + L1_Mus3 LINE L1 3583 4475 -1408 4 1121 772 118 84 56 chr17 70309785 70309928 -24962723 + LTRIS2 LTR ERV1 5 151 -413 4 1121 2071 43 0 0 chr17 70309897 70310155 -24962496 + LTRIS2 LTR ERV1 307 564 0 4 1121 336 48 0 0 chr17 70311001 70311043 -24961608 + (TTTTC)n Simple_repeat Simple_repeat 4 45 0 4 1121 243 369 71 9 chr17 70311806 70311918 -24960733 - B1F1 SINE Alu -29 120 2 4 1121 2293 319 73 39 chr17 70312386 70313819 -24958832 - Lx8 LINE L1 -17 7456 6126 4 1121 210 143 0 0 chr17 70314272 70314307 -24958344 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 4 1121 1170 82 0 7 chr17 70314308 70314455 -24958196 - B1_Mus1 SINE Alu -1 147 2 4 1121 686 316 111 26 chr17 70315724 70316104 -24956547 - MLT1D LTR MaLR -30 475 64 4 1121 600 84 0 0 chr17 70317827 70317910 -24954741 + (TTCC)n Simple_repeat Simple_repeat 1 83 0 4 1121 21 0 0 0 chr17 70318612 70318633 -24954018 + GC_rich Low_complexity Low_complexity 1 21 0 4 1121 234 128 0 0 chr17 70319050 70319089 -24953562 + (CGG)n Simple_repeat Simple_repeat 3 41 0 4 1121 246 154 14 58 chr17 70321017 70321086 -24951565 + Lx8 LINE L1 7407 7472 -1 4 1121 424 221 98 92 chr17 70322072 70322236 -24950415 + B3A SINE B2 23 187 -8 4 1121 410 143 13 0 chr17 70322727 70322804 -24949847 + GA-rich Low_complexity Low_complexity 2 79 0 4 1121 201 147 0 0 chr17 70322802 70322836 -24949815 + (CAG)n Simple_repeat Simple_repeat 2 35 0 4 1121 203 271 79 124 chr17 70324375 70324552 -24948099 + L2b LINE L2 3207 3375 0 4 1121 913 261 136 17 chr17 70325030 70325384 -24947267 + MTD LTR MaLR 10 405 -14 4 1121 21 36 0 0 chr17 70325584 70325612 -24947039 + AT_rich Low_complexity Low_complexity 1 28 0 4 1121 459 288 67 24 chr17 70326134 70326344 -24946307 - L1M5 LINE L1 -662 5578 5360 4 1121 308 196 89 40 chr17 70326407 70326508 -24946143 - L1M5 LINE L1 -872 5274 5169 4 1121 280 154 0 44 chr17 70326859 70326927 -24945724 + CT-rich Low_complexity Low_complexity 3 67 0 4 1121 378 317 9 9 chr17 70326960 70327065 -24945586 - PB1D10 SINE Alu -11 106 2 4 1121 435 38 0 0 chr17 70327388 70327441 -24945210 + (TC)n Simple_repeat Simple_repeat 2 54 0 4 1121 322 354 54 34 chr17 70328007 70328212 -24944439 + MIRb SINE MIR 44 252 -10 4 1121 1084 209 87 2 chr17 70328926 70329231 -24943420 + Lx9 LINE L1 5596 5959 -1685 4 1121 235 95 48 0 chr17 70329219 70329261 -24943390 + L1_Rod LINE L1 4565 4608 -1239 4 1121 230 279 24 37 chr17 70330357 70330439 -24942212 - ID4_ SINE ID -1 82 2 4 1121 577 287 79 98 chr17 70331129 70331434 -24941217 - MTEb LTR MaLR -5 374 76 4 1121 389 20 0 20 chr17 70331449 70331500 -24941151 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1121 219 100 59 20 chr17 70332429 70332480 -24940171 + T-rich Low_complexity Low_complexity 3 55 0 4 1121 5941 188 40 45 chr17 70332496 70333419 -24939232 - Lx2B LINE L1 -145 6855 5962 4 1121 1199 55 0 0 chr17 70333419 70333564 -24939087 - B1_Mus1 SINE Alu -2 146 2 4 1121 5830 165 32 11 chr17 70333564 70334562 -24938089 - Lx2B LINE L1 -1039 5961 4916 4 1121 230 313 173 15 chr17 70335192 70335325 -24937326 + MER5A DNA MER1_type 2 155 -34 4 1121 186 311 47 37 chr17 70336305 70336412 -24936239 + L2 LINE L2 2529 2636 -783 4 1121 662 269 0 21 chr17 70337738 70337882 -24934769 + RSINE1 SINE B4 2 142 -23 4 1121 578 203 12 17 chr17 70338000 70338241 -24934410 + (CATA)n Simple_repeat Simple_repeat 1 239 0 4 1121 322 189 8 52 chr17 70338301 70338435 -24934216 + (CATA)n Simple_repeat Simple_repeat 4 131 0 4 1121 487 232 13 0 chr17 70338481 70338636 -24934015 + (CATA)n Simple_repeat Simple_repeat 4 160 0 4 1121 238 248 7 28 chr17 70338669 70338814 -24933837 + (CATATA)n Simple_repeat Simple_repeat 2 143 0 4 1121 261 339 45 38 chr17 70339312 70339444 -24933207 - MIR3 SINE MIR -6 202 70 4 1121 297 277 56 37 chr17 70339529 70339690 -24932961 + L1MA8 LINE L1 5978 6141 -150 4 1121 423 300 0 9 chr17 70339735 70339846 -24932805 - RSINE1 SINE B4 -50 115 6 4 1121 204 40 0 0 chr17 70339869 70339894 -24932757 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 4 1121 235 217 0 0 chr17 70340052 70340098 -24932553 + CT-rich Low_complexity Low_complexity 4 49 0 4 1121 592 302 6 0 chr17 70340160 70340322 -24932329 - RSINE1 SINE B4 0 165 3 4 1121 533 287 36 25 chr17 70340639 70340822 -24931829 + B3 SINE B2 1 169 -26 4 1121 677 222 58 0 chr17 70340873 70341064 -24931587 - Lx7 LINE L1 -1868 5828 5625 4 1121 8208 234 72 59 chr17 70341284 70343897 -24928754 + MYSERV16_I-int LTR ERVK 5 1532 -794 4 1121 4509 34 2 2 chr17 70343897 70344432 -24928219 + L1Md_F2 LINE L1 6047 6581 -1 4 1121 8208 198 72 50 chr17 70344432 70345222 -24927429 + MYSERV16_I-int LTR ERVK 1533 2325 -1 4 1121 211 267 0 55 chr17 70345463 70345554 -24927097 + T-rich Low_complexity Low_complexity 4 89 0 4 1121 2864 98 44 7 chr17 70346112 70346564 -24926087 + RLTR44D LTR ERVK 1 469 -17 4 1121 1520 296 11 34 chr17 70346833 70347017 -24925634 - BGLII_B LTR ERVK 0 441 261 4 1121 1017 38 105 0 chr17 70347017 70347150 -24925501 - B1_Mm SINE Alu 0 147 1 4 1121 1520 296 11 34 chr17 70347150 70347377 -24925274 - BGLII_B LTR ERVK -181 260 40 4 1121 540 0 0 0 chr17 70347377 70347437 -24925214 + (TA)n Simple_repeat Simple_repeat 1 60 0 4 1121 1520 296 11 34 chr17 70347437 70347465 -24925186 - BGLII_B LTR ERVK -402 39 11 4 1121 323 235 29 0 chr17 70348202 70348270 -24924381 + B4 SINE B4 14 83 -209 4 1121 1081 305 60 39 chr17 70348542 70348979 -24923672 - Lx8 LINE L1 -256 7217 6772 4 1121 643 268 5 69 chr17 70349001 70349205 -24923446 - B3A SINE B2 -4 194 4 4 1121 279 0 0 0 chr17 70349932 70349963 -24922688 + (TTG)n Simple_repeat Simple_repeat 3 33 0 4 1121 412 273 50 0 chr17 70352259 70352358 -24920293 - PB1D7 SINE Alu -8 112 9 4 1121 305 380 19 0 chr17 70352270 70352378 -24920273 - ID_B1 SINE B4 -45 179 70 4 1121 233 376 17 17 chr17 70353108 70353227 -24919424 + L2b LINE L2 3240 3358 -17 4 1121 532 284 123 37 chr17 70353283 70353884 -24918767 + L1MA6 LINE L1 5548 6225 -75 4 1121 254 379 16 8 chr17 70356787 70356912 -24915739 + MLT1D LTR MaLR 262 387 -118 4 1121 601 303 160 15 chr17 70357065 70357333 -24915318 + Tigger7 DNA MER2_type 48 354 -2137 4 1121 319 341 71 0 chr17 70357372 70357498 -24915153 + Tigger7 DNA MER2_type 2348 2482 -9 4 1121 22 51 0 48 chr17 70358146 70358208 -24914443 + AT_rich Low_complexity Low_complexity 1 59 0 4 1121 768 77 0 0 chr17 70358216 70358320 -24914331 - B2_Mm2 SINE B2 -68 127 24 4 1121 24 53 0 0 chr17 70358569 70358607 -24914044 + AT_rich Low_complexity Low_complexity 1 38 0 4 1121 240 296 30 10 chr17 70358608 70358707 -24913944 - L1M4 LINE L1 -3393 2753 2653 4 1121 993 286 85 52 chr17 70358737 70359139 -24913512 + MTD LTR MaLR 5 419 0 4 1121 678 248 68 72 chr17 70359345 70359567 -24913084 + MTD LTR MaLR 199 419 0 4 1121 224 293 104 15 chr17 70360395 70360530 -24912121 - MIRb SINE MIR -16 252 106 4 1121 513 204 234 23 chr17 70360538 70360709 -24911942 + B3 SINE B2 2 208 -8 4 1121 3481 26 0 16 chr17 70361494 70361922 -24910729 + L1Md_F2 LINE L1 6161 6581 -1 4 1121 186 133 0 0 chr17 70363047 70363077 -24909574 + (CCTA)n Simple_repeat Simple_repeat 1 30 0 4 1121 315 0 0 0 chr17 70363101 70363136 -24909515 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1121 288 203 182 30 chr17 70363206 70363295 -24909356 - Lx9 LINE L1 -15 7629 7518 4 1121 1032 156 0 0 chr17 70363295 70363475 -24909176 + (TA)n Simple_repeat Simple_repeat 1 180 0 4 1121 288 203 182 30 chr17 70363475 70363517 -24909134 - Lx9 LINE L1 -127 7517 7478 4 1121 301 230 20 10 chr17 70363568 70363669 -24908982 - Lx9 LINE L1 -140 7504 7403 4 1121 319 189 28 9 chr17 70364298 70364405 -24908246 - Lx9 LINE L1 0 7644 7536 4 1121 263 203 14 0 chr17 70364423 70364492 -24908159 + (TG)n Simple_repeat Simple_repeat 1 70 0 4 1121 684 196 6 11 chr17 70364505 70364686 -24907965 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1121 338 179 0 103 chr17 70364692 70364779 -24907872 - Lx9 LINE L1 -167 7477 7400 4 1121 26 50 0 0 chr17 70366454 70366494 -24906157 + AT_rich Low_complexity Low_complexity 1 40 0 4 1121 395 278 81 28 chr17 70366959 70367170 -24905481 - Lx9 LINE L1 -65 7579 7358 4 1121 23 0 0 0 chr17 70367478 70367501 -24905150 + AT_rich Low_complexity Low_complexity 1 23 0 4 1121 327 275 12 0 chr17 70367501 70367581 -24905070 + ID4_ SINE ID 3 83 0 4 1121 1094 59 0 0 chr17 70367899 70368034 -24904617 + B1_Mus1 SINE Alu 2 136 -12 4 1121 370 34 51 0 chr17 70368035 70368094 -24904557 + (TAAA)n Simple_repeat Simple_repeat 2 63 0 4 1121 976 250 127 11 chr17 70368176 70368443 -24904208 + MTD LTR MaLR 66 363 -56 4 1121 801 332 34 4 chr17 70369062 70369331 -24903320 - B4 SINE B4 -10 282 6 4 1121 236 302 166 6 chr17 70370562 70370725 -24901926 - MIR SINE MIR -5 257 69 4 1121 298 0 68 34 chr17 70370762 70370821 -24901830 + (CAAAA)n Simple_repeat Simple_repeat 1 61 0 4 1121 194 326 67 0 chr17 70370898 70370987 -24901664 + MER5A DNA MER1_type 84 178 -11 4 1121 685 285 0 7 chr17 70371290 70371442 -24901209 - RSINE1 SINE B4 -13 152 2 4 1121 21 0 0 0 chr17 70372349 70372370 -24900281 + AT_rich Low_complexity Low_complexity 1 21 0 4 1121 186 264 94 0 chr17 70372744 70372797 -24899854 + MIR SINE MIR 93 150 -58 4 1121 31 26 0 0 chr17 70372820 70372858 -24899793 + AT_rich Low_complexity Low_complexity 1 38 0 4 1121 27 0 0 0 chr17 70373918 70373945 -24898706 + AT_rich Low_complexity Low_complexity 1 27 0 4 1121 207 0 0 0 chr17 70373945 70373968 -24898683 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 1121 25 0 0 0 chr17 70374224 70374249 -24898402 + AT_rich Low_complexity Low_complexity 1 25 0 5 1121 423 281 88 0 chr17 70374492 70374652 -24897999 + MER2 DNA MER2_type 70 243 -102 5 1121 537 262 142 114 chr17 70374682 70375049 -24897602 - ORR1B2 LTR MaLR -14 380 5 5 1121 611 156 41 48 chr17 70375060 70375214 -24897437 - ORR1D1 LTR MaLR -214 145 1 5 1121 22 0 0 0 chr17 70376666 70376688 -24895963 + AT_rich Low_complexity Low_complexity 1 22 0 5 1121 324 0 0 0 chr17 70377525 70377561 -24895090 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 5 1121 6580 93 20 22 chr17 70377830 70378804 -24893847 + Lx LINE L1 5676 6648 -6 5 1121 1280 69 0 6 chr17 70379010 70379184 -24893467 + B2_Mm2 SINE B2 1 173 -22 5 1121 222 62 0 0 chr17 70379186 70379218 -24893433 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 5 1121 410 275 89 56 chr17 70379825 70380183 -24892468 + L1MC1 LINE L1 5707 6076 -257 5 1121 600 14 0 0 chr17 70380473 70380542 -24892109 + (GA)n Simple_repeat Simple_repeat 2 70 0 5 1121 715 292 32 23 chr17 70380731 70380961 -24891690 - B3A SINE B2 -1 215 2 5 1121 1200 162 61 14 chr17 70381791 70382004 -24890647 + URR1A DNA MER1_type 1 223 -3 5 1121 21 57 0 0 chr17 70383861 70383896 -24888755 + AT_rich Low_complexity Low_complexity 1 35 0 5 1122 24 32 0 0 chr17 70386577 70386608 -24886043 + AT_rich Low_complexity Low_complexity 1 31 0 5 1122 377 272 23 123 chr17 70387785 70387915 -24884736 - PB1D10 SINE Alu 0 120 4 5 1122 311 78 0 19 chr17 70388159 70388211 -24884440 + (TTTTTA)n Simple_repeat Simple_repeat 2 52 0 5 1122 609 291 29 0 chr17 70388468 70388640 -24884011 + MER2 DNA MER2_type 163 339 -6 5 1122 28 0 0 0 chr17 70389006 70389034 -24883617 + AT_rich Low_complexity Low_complexity 1 28 0 5 1122 234 0 0 0 chr17 70389210 70389236 -24883415 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 5 1122 229 346 0 0 chr17 70389503 70389584 -24883067 + (TG)n Simple_repeat Simple_repeat 2 82 0 5 1122 325 330 86 49 chr17 70392038 70392363 -24880288 - HAL1b LINE L1 -799 1210 874 5 1122 3664 55 2 0 chr17 70392370 70392821 -24879830 + L1_Mus1 LINE L1 6116 6567 0 5 1122 384 250 87 29 chr17 70393751 70393854 -24878797 - B1F SINE Alu -9 140 32 5 1122 21 36 0 0 chr17 70395262 70395290 -24877361 + AT_rich Low_complexity Low_complexity 1 28 0 5 1122 414 0 0 0 chr17 70395471 70395517 -24877134 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1122 316 335 43 23 chr17 70395549 70395806 -24876845 - L1MB8 LINE L1 -2 6176 5915 5 1122 210 136 0 0 chr17 70396317 70396361 -24876290 + (T)n Simple_repeat Simple_repeat 1 44 0 5 1122 226 341 67 22 chr17 70397764 70397944 -24874707 - Lx9 LINE L1 -161 7483 7296 5 1122 514 269 79 61 chr17 70397945 70398222 -24874429 + L1_Rod LINE L1 5396 5677 -170 5 1122 1022 265 86 14 chr17 70398342 70398633 -24874018 + MTD LTR MaLR 1 312 -107 5 1122 618 310 105 16 chr17 70398856 70399168 -24873483 - L1MA7 LINE L1 -382 5918 5590 5 1122 300 53 0 0 chr17 70399168 70399206 -24873445 + (TTA)n Simple_repeat Simple_repeat 3 40 0 5 1122 618 306 124 17 chr17 70399206 70399434 -24873217 - L1MA7 LINE L1 -702 5589 5321 5 1122 324 337 373 22 chr17 70399606 70399914 -24872737 - L1MA7 LINE L1 -969 5174 4759 5 1122 36531 42 0 3 chr17 70399929 70406303 -24866348 - L1Md_T LINE L1 0 6585 135 5 1122 300 262 137 37 chr17 70406309 70406627 -24866024 - L1MA7 LINE L1 -1381 4762 4400 5 1122 549 44 0 0 chr17 70407015 70407083 -24865568 + (TC)n Simple_repeat Simple_repeat 2 69 0 5 1122 512 252 0 52 chr17 70407084 70407256 -24865395 - Lx5 LINE L1 -5 7045 6883 5 1122 2541 240 30 15 chr17 70407251 70407432 -24865219 + Lx5 LINE L1 6193 6366 -684 5 1122 3232 158 121 51 chr17 70407432 70408121 -24864530 + RMER19A LTR ERVK 1 737 0 5 1122 2541 240 30 15 chr17 70408121 70408611 -24864040 + Lx5 LINE L1 6367 6874 -176 5 1122 1048 287 60 3 chr17 70408614 70408981 -24863670 - L1_Mur3 LINE L1 -1826 4054 3667 5 1122 500 337 69 23 chr17 70409046 70409398 -24863253 - L1MA7 LINE L1 -2451 3695 3334 5 1122 1289 258 72 62 chr17 70409689 70410090 -24862561 + MTD LTR MaLR 1 405 -14 5 1122 302 271 65 23 chr17 70410096 70410452 -24862199 - L1MA7 LINE L1 -3096 3047 2691 5 1122 7956 26 1 7 chr17 70410700 70411692 -24860959 - L1Md_F2 LINE L1 0 6582 5597 5 1122 181 322 47 94 chr17 70412113 70412240 -24860411 - L2a LINE L2 -33 3393 3273 5 1122 204 176 44 0 chr17 70412265 70412333 -24860318 + (TA)n Simple_repeat Simple_repeat 1 71 0 5 1122 234 241 21 32 chr17 70412972 70413099 -24859552 + L1_Rod LINE L1 5669 5793 -54 5 1122 207 172 78 0 chr17 70413350 70413414 -24859237 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 5 1122 187 185 54 0 chr17 70413457 70413549 -24859102 + (TCTA)n Simple_repeat Simple_repeat 1 97 0 5 1122 872 99 23 23 chr17 70413564 70413740 -24858911 + (TCTA)n Simple_repeat Simple_repeat 3 178 0 5 1122 597 263 82 21 chr17 70413787 70413981 -24858670 - RMER15 LTR ERVL -16 559 354 5 1122 201 296 14 0 chr17 70413982 70414053 -24858598 + (TG)n Simple_repeat Simple_repeat 1 72 0 5 1122 363 162 29 0 chr17 70414053 70414121 -24858530 - HAL1-3A_ME LINE L1 -831 2027 1958 5 1122 272 359 98 29 chr17 70414577 70414821 -24857830 - L2a LINE L2 -733 2686 2426 5 1122 576 325 25 25 chr17 70414842 70415041 -24857610 + MTD LTR MaLR 1 199 -220 5 1122 304 28 0 0 chr17 70415561 70415597 -24857054 - L1Md_F3 LINE L1 -552 6032 5997 5 1122 4434 32 2 0 chr17 70415602 70416125 -24856526 + L1Md_F3 LINE L1 6061 6584 0 5 1122 935 188 60 6 chr17 70416143 70416325 -24856326 - Lx5 LINE L1 -233 6817 6626 5 1122 689 208 80 15 chr17 70416295 70416495 -24856156 + Lx5 LINE L1 6803 7015 -35 5 1122 212 272 12 47 chr17 70416571 70416656 -24855995 - L2a LINE L2 -1401 2018 1937 5 1122 270 209 30 0 chr17 70416852 70416919 -24855732 - L1MD2 LINE L1 -70 6289 6221 5 1122 745 265 102 22 chr17 70417193 70417506 -24855145 - L1MD2 LINE L1 -599 5760 5423 5 1122 944 73 50 22 chr17 70417873 70418012 -24854639 + B1_Mus1 SINE Alu 2 144 -4 5 1122 191 170 0 21 chr17 70418261 70418309 -24854342 + (TA)n Simple_repeat Simple_repeat 2 48 0 5 1122 869 176 6 0 chr17 70419441 70419617 -24853034 + GA-rich Low_complexity Low_complexity 2 178 0 5 1122 2399 165 89 2 chr17 70420309 70420403 -24852248 - RLTR16 LTR ERVK 0 505 413 5 1122 333 0 0 0 chr17 70420403 70420440 -24852211 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1122 2399 165 89 2 chr17 70420440 70420807 -24851844 - RLTR16 LTR ERVK -93 412 6 5 1122 893 330 157 38 chr17 70422837 70423794 -24848857 - L1MC4a LINE L1 -88 7794 6724 5 1122 314 289 0 0 chr17 70424256 70424339 -24848312 + GA-rich Low_complexity Low_complexity 2 84 0 5 1122 543 286 80 37 chr17 70424456 70424913 -24847738 - L1M3 LINE L1 -652 5648 5172 5 1122 306 314 125 28 chr17 70425097 70425424 -24847227 - L1MC4a LINE L1 -1354 6528 6170 5 1122 332 311 74 95 chr17 70425475 70425812 -24846839 - L1M4 LINE L1 -2697 3449 3120 5 1122 408 40 0 0 chr17 70426033 70426083 -24846568 + (CTAAA)n Simple_repeat Simple_repeat 1 50 0 5 1122 231 320 88 74 chr17 70426114 70426267 -24846384 + MIRb SINE MIR 5 164 -104 5 1122 942 308 89 44 chr17 70426616 70427112 -24845539 + MER44B DNA MER2_type 2 519 -31 5 1122 374 138 0 15 chr17 70427187 70427253 -24845398 - Lx9 LINE L1 -543 7101 7037 5 1122 643 128 45 0 chr17 70427309 70427442 -24845209 + Lx9 LINE L1 7505 7643 -1 5 1122 183 394 30 50 chr17 70428772 70428871 -24843780 + MIR SINE MIR 5 101 -161 5 1122 25 65 0 0 chr17 70430475 70430521 -24842130 + AT_rich Low_complexity Low_complexity 1 46 0 5 1122 3126 210 100 32 chr17 70431469 70432779 -24839872 + L1_Rod LINE L1 553 1937 -3910 5 1122 459 0 0 0 chr17 70432779 70432830 -24839821 + (TCTA)n Simple_repeat Simple_repeat 1 51 0 5 1122 3126 188 115 8 chr17 70432830 70433021 -24839630 + L1_Rod LINE L1 1938 2146 -3701 5 1122 2163 220 60 56 chr17 70433027 70433818 -24838833 + L1_Rod LINE L1 3752 4554 -1326 5 1122 531 285 0 16 chr17 70434372 70434497 -24838154 - B1_Mus1 SINE Alu -25 123 1 5 1122 287 270 113 35 chr17 70435372 70435487 -24837164 - MTEb LTR MaLR 0 379 256 5 1122 708 291 66 115 chr17 70437534 70437899 -24834752 - MTE2b LTR MaLR -15 364 18 5 1122 2071 102 0 53 chr17 70438205 70438545 -24834106 - Lx LINE L1 -6 6648 6327 5 1122 1767 112 4 0 chr17 70438545 70438803 -24833848 + Lx LINE L1 6060 6318 -336 5 1122 427 342 65 18 chr17 70439127 70439356 -24833295 - MER2 DNA MER2_type 0 345 106 5 1122 250 319 49 35 chr17 70439447 70439590 -24833061 - Lx8 LINE L1 -103 7370 7226 5 1122 552 279 206 6 chr17 70439626 70439915 -24832736 + MTE2b LTR MaLR 5 372 -7 5 1122 444 51 0 0 chr17 70441009 70441068 -24831583 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 1122 375 23 0 0 chr17 70441455 70441499 -24831152 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1122 228 111 0 0 chr17 70442174 70442210 -24830441 + (GA)n Simple_repeat Simple_repeat 1 36 0 5 1122 2645 98 8 3 chr17 70442686 70443074 -24829577 - L1_Mus3 LINE L1 -6 6632 6243 5 1122 3334 140 14 68 chr17 70443075 70444197 -24828454 - L1_Mus3 LINE L1 -591 6045 5076 5 1122 5110 140 3 0 chr17 70444190 70445060 -24827591 + L1_Mus3 LINE L1 4223 5095 -788 5 1122 215 81 54 0 chr17 70445320 70445357 -24827294 + (GGGAGA)n Simple_repeat Simple_repeat 6 44 0 5 1122 260 303 10 0 chr17 70445725 70445824 -24826827 + L1M5 LINE L1 2360 2459 -3687 5 1122 1192 239 42 28 chr17 70445824 70446177 -24826474 + RLTR15 LTR ERVK 1 358 -1 5 1122 700 313 127 51 chr17 70446230 70447054 -24825597 + L1MC LINE L1 2518 3423 -2723 5 1122 400 272 193 17 chr17 70447351 70447527 -24825124 + B3 SINE B2 2 208 -8 5 1122 506 295 80 40 chr17 70447539 70447740 -24824911 + B3 SINE B2 4 212 -4 5 1122 1105 69 28 0 chr17 70447914 70448058 -24824593 - B1_Mus1 SINE Alu 0 148 1 5 1122 310 292 88 122 chr17 70448172 70448410 -24824241 + L1MC LINE L1 4705 4934 -1212 5 1122 232 357 118 0 chr17 70448618 70448940 -24823711 + L1M5 LINE L1 5322 5681 -498 5 1122 307 354 12 87 chr17 70448948 70449109 -24823542 + MER44D DNA MER2_type 82 230 -475 5 1122 579 272 134 15 chr17 70449137 70449398 -24823253 + MER44D DNA MER2_type 336 627 -78 5 1122 2993 49 3 0 chr17 70449552 70449921 -24822730 - L1_Mus1 LINE L1 0 6567 6198 5 1122 483 345 23 14 chr17 70449956 70450303 -24822348 - L1MA7 LINE L1 -392 5899 5550 5 1122 406 301 139 13 chr17 70450303 70450461 -24822190 + MTD LTR MaLR 1 178 -241 5 1122 387 298 99 37 chr17 70450556 70451031 -24821620 - L1MA7 LINE L1 -812 5479 4973 5 1122 343 183 0 27 chr17 70451096 70451169 -24821482 + L1MC LINE L1 5335 5405 -719 5 1122 203 262 0 0 chr17 70451212 70451273 -24821378 + (TA)n Simple_repeat Simple_repeat 2 62 0 5 1122 534 31 0 0 chr17 70451273 70451337 -24821314 + (GA)n Simple_repeat Simple_repeat 1 64 0 5 1122 441 301 38 55 chr17 70451520 70451756 -24820895 - L1M2 LINE L1 -1212 4931 4700 5 1122 423 0 0 0 chr17 70451891 70451938 -24820713 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1122 207 0 0 0 chr17 70452644 70452667 -24819984 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 1122 22 35 0 0 chr17 70454521 70454550 -24818101 + AT_rich Low_complexity Low_complexity 1 29 0 5 1122 232 231 0 0 chr17 70454550 70454602 -24818049 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 1122 492 266 61 30 chr17 70454620 70454752 -24817899 - RSINE1 SINE B4 -28 137 2 6 1122 206 32 0 31 chr17 70455186 70455218 -24817433 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 6 1122 1429 69 21 0 chr17 70457075 70457264 -24815387 + B2_Mm2 SINE B2 1 193 -2 6 1122 248 309 148 42 chr17 70458005 70458194 -24814457 - MIR SINE MIR -26 236 28 6 1122 2385 213 36 56 chr17 70458520 70459211 -24813440 - Lx9 LINE L1 -1 7643 6967 6 1122 1116 148 38 13 chr17 70459211 70459465 -24813186 - RLTR9B2 LTR ERVK -3 417 141 6 1122 574 218 32 13 chr17 70459465 70459623 -24813028 - Lx9 LINE L1 -708 6936 6776 6 1122 435 424 9 0 chr17 70459628 70459859 -24812792 + Tigger7 DNA MER2_type 80 312 -2179 6 1122 1723 19 24 0 chr17 70459877 70460087 -24812564 + L1Md_F2 LINE L1 5633 5847 -737 6 1122 4230 37 16 0 chr17 70460093 70460602 -24812049 + L1Md_F2 LINE L1 6062 6578 -4 6 1122 225 0 0 0 chr17 70460805 70460830 -24811821 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1122 232 273 47 47 chr17 70461067 70461194 -24811457 - Lx8 LINE L1 -7 7466 7340 6 1122 22 35 0 0 chr17 70461194 70461223 -24811428 + AT_rich Low_complexity Low_complexity 1 29 0 6 1122 37181 33 0 1 chr17 70461265 70466680 -24805971 - L1Md_T LINE L1 0 6582 1170 6 1122 4316 149 29 35 chr17 70466686 70467598 -24805053 - L1Md_T LINE L1 -5411 1205 300 6 1122 277 248 95 40 chr17 70470943 70471069 -24801582 + MER57D LTR ERV1 272 404 -7 6 1122 720 35 0 0 chr17 70471768 70471855 -24800796 + (TC)n Simple_repeat Simple_repeat 2 88 0 6 1122 499 305 129 35 chr17 70471923 70472178 -24800473 - B4A SINE B4 -11 281 3 6 1122 232 0 24 73 chr17 70473608 70473649 -24799002 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 1122 21 100 0 0 chr17 70474414 70474484 -24798167 + AT_rich Low_complexity Low_complexity 1 70 0 6 1122 200 316 13 0 chr17 70474494 70474573 -24798078 + CT-rich Low_complexity Low_complexity 3 82 0 6 1122 180 0 0 0 chr17 70475007 70475027 -24797624 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 6 1122 856 85 85 0 chr17 70475189 70475318 -24797333 + L1_Mus1 LINE L1 6428 6567 0 6 1122 372 274 124 20 chr17 70476691 70476892 -24795759 + L1MA7 LINE L1 5752 5973 -318 6 1122 397 299 40 27 chr17 70476893 70477041 -24795610 + RSINE1 SINE B4 14 163 -2 6 1122 206 220 0 57 chr17 70477715 70477768 -24794883 + GA-rich Low_complexity Low_complexity 4 53 0 6 1122 1223 55 0 0 chr17 70477976 70478122 -24794529 - B1_Mus2 SINE Alu 0 147 2 6 1122 270 317 88 58 chr17 70478232 70478403 -24794248 + MIRb SINE MIR 12 187 -81 6 1122 183 80 0 0 chr17 70479183 70479208 -24793443 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 1122 237 329 145 0 chr17 70479704 70479856 -24792795 - MIRb SINE MIR -26 242 69 6 1122 1893 195 99 13 chr17 70479856 70480309 -24792342 - RMER15 LTR ERVL 0 575 84 6 1122 248 300 0 0 chr17 70480393 70480453 -24792198 - RMER15 LTR ERVL -515 60 1 6 1122 186 43 0 0 chr17 70480502 70480525 -24792126 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 6 1122 1579 172 50 3 chr17 70480527 70480830 -24791821 - Lx4A LINE L1 -6 7052 6736 6 1122 189 0 0 0 chr17 70481531 70481552 -24791099 + (T)n Simple_repeat Simple_repeat 1 21 0 6 1122 6613 76 20 70 chr17 70481839 70482870 -24789781 - Lx3_Mus LINE L1 0 7009 6030 6 1122 28 29 0 0 chr17 70483315 70483350 -24789301 + AT_rich Low_complexity Low_complexity 1 35 0 6 1122 495 0 0 0 chr17 70484210 70484265 -24788386 + (TC)n Simple_repeat Simple_repeat 2 56 0 6 1122 489 34 0 0 chr17 70484265 70484323 -24788328 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1122 236 256 0 22 chr17 70484587 70484679 -24787972 + (CATATA)n Simple_repeat Simple_repeat 3 92 0 6 1122 20433 159 43 32 chr17 70484930 70490813 -24781838 - L1_Mus3 LINE L1 0 6638 493 6 1122 3886 202 2 44 chr17 70491265 70492084 -24780567 + Lx2B LINE L1 6216 7000 0 6 1122 555 242 11 6 chr17 70492093 70492272 -24780379 + GA-rich Low_complexity Low_complexity 1 180 0 6 1122 1145 102 17 0 chr17 70492283 70492460 -24780191 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 6 1122 459 0 0 0 chr17 70492460 70492511 -24780140 + (GAAA)n Simple_repeat Simple_repeat 4 54 0 6 1122 919 153 11 0 chr17 70492511 70492633 -24780018 + polypurine Low_complexity Low_complexity 2 125 0 6 1122 1246 40 17 11 chr17 70492633 70492812 -24779839 + (GAA)n Simple_repeat Simple_repeat 1 180 0 6 1122 919 153 11 0 chr17 70492812 70492865 -24779786 + polypurine Low_complexity Low_complexity 126 178 0 6 1122 271 296 12 0 chr17 70493052 70493133 -24779518 - RMER15-int LTR ERVL -40 4959 4878 6 1122 229 226 16 31 chr17 70494504 70494568 -24778083 - MTD LTR MaLR -1 418 356 6 1122 1947 13 0 0 chr17 70497605 70497837 -24774814 + L1_Mm LINE L1 4045 4276 -1607 6 1122 4712 35 2 0 chr17 70497833 70498438 -24774213 + L1_Mm LINE L1 4083 4688 -1195 6 1122 6663 53 1 2 chr17 70498441 70499310 -24773341 + L1Md_T LINE L1 5685 6552 -30 6 1122 3942 31 5 0 chr17 70499307 70499993 -24772658 + L1Md_Gf LINE L1 2 561 -5961 6 1122 33842 35 0 0 chr17 70500000 70505168 -24767483 + L1Md_T LINE L1 325 5589 -297 1 1122 8966 8 0 0 chr17 70505168 70506268 -24766383 + L1Md_T LINE L1 5590 6585 0 1 1122 198 0 0 0 chr17 70506396 70506418 -24766233 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1122 564 15 0 0 chr17 70506603 70506668 -24765983 + (A)n Simple_repeat Simple_repeat 1 65 0 3 1122 24 32 0 0 chr17 70506679 70506710 -24765941 + AT_rich Low_complexity Low_complexity 1 31 0 4 1122 3172 127 40 0 chr17 70507238 70507718 -24764933 - Lx2B LINE L1 -8 6992 6494 5 1122 522 223 65 16 chr17 70508154 70508277 -24764374 - B1_Mur1 SINE Alu -2 147 19 6 1122 912 301 11 66 chr17 70509017 70509291 -24763360 + MTE2b LTR MaLR 5 263 -116 7 1122 543 294 16 8 chr17 70509356 70509483 -24763168 + B1F SINE Alu 10 137 -12 8 1122 528 197 161 7 chr17 70510248 70510391 -24762260 + Lx3B LINE L1 6805 6969 -4 9 1122 34 24 0 0 chr17 70510393 70510434 -24762217 + AT_rich Low_complexity Low_complexity 1 41 0 1 1122 582 71 0 0 chr17 70511524 70511608 -24761043 + (TTGG)n Simple_repeat Simple_repeat 2 85 0 1 1122 351 295 102 58 chr17 70511881 70512155 -24760496 - LTR48 LTR ERV1 -9 778 493 1 1122 303 294 108 32 chr17 70512175 70512361 -24760290 - LTR48 LTR ERV1 -396 248 49 1 1122 228 86 0 0 chr17 70512868 70512903 -24759748 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1122 469 297 29 21 chr17 70513879 70514120 -24758531 + L1M4 LINE L1 2702 2944 -3202 1 1122 731 204 25 6 chr17 70514552 70514710 -24757941 + Lx6 LINE L1 7299 7459 -1 1 1122 267 185 55 25 chr17 70514977 70515109 -24757542 + L1M4 LINE L1 5308 5445 -852 1 1122 1276 104 0 21 chr17 70515135 70515322 -24757329 + B2_Mm2 SINE B2 3 185 -10 1 140 584 302 88 18 chr17 70516672 70516898 -24755753 + MER2 DNA MER2_type 98 339 -6 1 1123 209 315 10 110 chr17 70517202 70517302 -24755349 + MER5B DNA MER1_type 76 165 -13 1 1123 384 22 0 0 chr17 70517341 70517386 -24755265 + (GGGA)n Simple_repeat Simple_repeat 4 48 0 1 1123 1137 123 0 0 chr17 70517391 70517570 -24755081 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 2 1123 2169 226 36 8 chr17 70518153 70518680 -24753971 - Lx6 LINE L1 0 7460 6919 2 1123 1081 86 0 0 chr17 70518729 70518869 -24753782 + B1_Mus1 SINE Alu 3 142 -6 2 1123 820 186 6 6 chr17 70518878 70519056 -24753595 + A-rich Low_complexity Low_complexity 3 180 0 2 1123 295 272 35 81 chr17 70519588 70519760 -24752891 - RSINE1 SINE B4 0 165 2 2 1123 302 334 56 111 chr17 70520417 70520749 -24751902 - ORR1E LTR MaLR -61 323 12 2 1123 180 0 0 0 chr17 70520749 70520769 -24751882 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 1123 302 341 36 57 chr17 70520769 70520780 -24751871 - ORR1E LTR MaLR -348 11 1 2 1123 321 26 0 0 chr17 70520823 70520861 -24751790 + (TTA)n Simple_repeat Simple_repeat 3 40 0 2 1123 243 0 0 0 chr17 70522987 70523014 -24749637 + (TA)n Simple_repeat Simple_repeat 2 28 0 2 1123 369 0 0 0 chr17 70523014 70523054 -24749597 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1123 198 102 0 71 chr17 70523558 70523600 -24749051 + L2 LINE L2 1993 2031 -1388 3 1123 1794 181 38 30 chr17 70524133 70524372 -24748279 - ORR1D1 LTR MaLR -1 373 130 3 1123 3216 59 0 12 chr17 70524372 70524784 -24747867 + MTB_Mm LTR MaLR 1 407 0 3 1123 1794 181 38 30 chr17 70524784 70524914 -24747737 - ORR1D1 LTR MaLR -245 129 1 3 1123 262 301 71 0 chr17 70524923 70525036 -24747615 - MLT1E2 LTR MaLR 0 505 385 3 1123 403 280 146 60 chr17 70525087 70525368 -24747283 - MLT1E2 LTR MaLR -303 324 20 3 1123 4195 146 91 28 chr17 70525368 70526202 -24746449 - Lx3C LINE L1 -439 6537 5651 3 1123 2279 156 40 8 chr17 70526203 70526604 -24746047 + Lx3C LINE L1 6559 6972 -4 3 1123 202 319 0 14 chr17 70526764 70526834 -24745817 + CT-rich Low_complexity Low_complexity 4 72 0 3 1123 4698 167 14 19 chr17 70527171 70528023 -24744628 - MERVL_2A-int LTR ERVL -3487 2274 1427 3 1123 1069 65 0 0 chr17 70528022 70528161 -24744490 - MERVL-int LTR ERVL -2603 2882 2744 3 1123 21 0 0 0 chr17 70528183 70528204 -24744447 + AT_rich Low_complexity Low_complexity 1 21 0 3 1123 337 297 101 7 chr17 70528442 70528591 -24744060 - MIR SINE MIR -94 168 6 3 1123 313 324 243 11 chr17 70528612 70528793 -24743858 + MER44B DNA MER2_type 1 223 -327 4 1123 12226 158 30 9 chr17 70529002 70532348 -24740303 - Lx5 LINE L1 -3 7047 3613 4 1123 480 18 0 0 chr17 70532813 70532870 -24739781 + (CA)n Simple_repeat Simple_repeat 1 57 0 4 1123 222 316 0 13 chr17 70533496 70533573 -24739078 + (CA)n Simple_repeat Simple_repeat 1 76 0 4 1123 1049 316 96 39 chr17 70533598 70535546 -24737105 - L1MA4 LINE L1 -365 5935 3838 4 1123 629 304 73 34 chr17 70536085 70536412 -24736239 + MER57F LTR ERV1 16 355 -81 4 1123 3188 131 80 121 chr17 70537895 70538624 -24734027 - RMER6A LTR ERVK -1 755 57 4 1123 189 0 0 0 chr17 70539647 70539668 -24732983 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 1123 730 119 25 0 chr17 70539665 70539824 -24732827 + (CAGAGA)n Simple_repeat Simple_repeat 6 168 0 4 1123 390 42 0 0 chr17 70539860 70539908 -24732743 + (TGAA)n Simple_repeat Simple_repeat 2 49 0 4 1123 535 283 33 0 chr17 70539911 70540063 -24732588 - MER2 DNA MER2_type -30 315 159 5 1123 573 377 21 25 chr17 70540253 70540536 -24732115 - B4A SINE B4 -8 284 3 5 1123 477 0 0 0 chr17 70540601 70540654 -24731997 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1123 346 169 184 52 chr17 70541151 70541326 -24731325 - Lx9 LINE L1 -1670 5974 5789 5 1123 181 200 0 54 chr17 70542257 70542294 -24730357 + L3 LINE CR1 4207 4241 -248 5 1123 2627 50 3 0 chr17 70543051 70543374 -24729277 - L1_Mus1 LINE L1 -1 6566 6243 5 1123 401 213 35 53 chr17 70543851 70543965 -24728686 - MER2 DNA MER2_type -154 191 80 5 1123 398 252 0 46 chr17 70545326 70545434 -24727217 - ID_B1 SINE B4 -24 200 98 5 1123 198 103 0 0 chr17 70545977 70546006 -24726645 + (TCTG)n Simple_repeat Simple_repeat 4 32 0 5 1123 234 180 0 0 chr17 70546181 70546242 -24726409 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 1123 270 282 63 73 chr17 70546243 70546530 -24726121 + RLTR21 LTR ERVK 1097 1380 -192 5 1123 428 336 43 26 chr17 70547577 70547809 -24724842 - L2a LINE L2 0 3426 3191 6 1123 184 321 109 36 chr17 70548017 70548127 -24724524 - L2a LINE L2 -548 2871 2754 6 1123 252 0 0 0 chr17 70548318 70548346 -24724305 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 1123 21 89 0 0 chr17 70548420 70548476 -24724175 + AT_rich Low_complexity Low_complexity 1 56 0 6 1123 323 169 70 0 chr17 70551316 70551387 -24721264 + MADE2 DNA Mariner 2 77 -3 6 1123 508 29 0 0 chr17 70551957 70552025 -24720626 + L1_Mus1 LINE L1 6500 6567 0 6 1123 204 321 73 12 chr17 70552521 70552603 -24720048 - MIR SINE MIR -93 169 83 6 1123 1338 288 96 27 chr17 70552997 70553664 -24718987 - Lx8 LINE L1 -6 7467 6755 6 1123 192 77 0 0 chr17 70553781 70553807 -24718844 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 6 1123 204 125 62 0 chr17 70553995 70554043 -24718608 + (TA)n Simple_repeat Simple_repeat 1 51 0 6 1123 549 0 0 0 chr17 70554048 70554109 -24718542 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 6 1123 199 146 107 18 chr17 70554617 70554673 -24717978 + MER5A DNA MER1_type 4 64 -125 7 1123 488 332 104 18 chr17 70554702 70555521 -24717130 - L1M2 LINE L1 -863 5280 4392 7 1123 340 338 7 0 chr17 70555578 70555726 -24716925 + L1M3 LINE L1 5534 5682 -507 7 1123 380 295 29 29 chr17 70555729 70555973 -24716678 + Lx8 LINE L1 5689 5932 -1541 7 1123 270 0 0 0 chr17 70556153 70556183 -24716468 + (CAGA)n Simple_repeat Simple_repeat 4 33 0 7 1123 4715 62 16 7 chr17 70556197 70556816 -24715835 + L1Md_F2 LINE L1 5955 6579 -3 7 1123 204 229 107 67 chr17 70556879 70556954 -24715697 + MER5A DNA MER1_type 60 137 -52 7 1123 874 231 73 58 chr17 70558531 70558641 -24714010 - Lx9 LINE L1 -20 7624 7517 7 1123 186 43 0 0 chr17 70558641 70558664 -24713987 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 1123 874 231 73 58 chr17 70558664 70558952 -24713699 - Lx9 LINE L1 -128 7516 7220 7 1123 354 23 0 0 chr17 70559123 70559166 -24713485 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 7 1123 1135 129 11 0 chr17 70559168 70559346 -24713305 - ORR1A2 LTR MaLR -55 272 93 7 1123 2496 120 50 16 chr17 70559426 70559850 -24712801 - RMER6B LTR ERVK -2 459 22 8 1123 1614 217 58 14 chr17 70561238 70561602 -24711049 + MTD LTR MaLR 26 405 -14 8 1123 393 22 0 0 chr17 70561996 70562042 -24710609 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 1123 1186 91 32 5 chr17 70562535 70562723 -24709928 + B2_Mm2 SINE B2 3 195 0 8 1123 21964 124 32 7 chr17 70565567 70569009 -24703642 + L1VL4 LINE L1 675 4219 -1664 8 1123 2231 70 3 0 chr17 70569009 70569295 -24703356 + L1_Mus1 LINE L1 6281 6567 0 8 1123 21964 123 35 7 chr17 70569295 70570170 -24702481 + L1VL4 LINE L1 4220 5108 -775 8 1123 6969 82 0 23 chr17 70570200 70571487 -24701164 - L1_Mus2 LINE L1 0 6566 5310 8 1123 291 348 0 17 chr17 70571500 70571620 -24701031 + CT-rich Low_complexity Low_complexity 1 118 0 8 1123 197 176 13 39 chr17 70572236 70572313 -24700338 + GA-rich Low_complexity Low_complexity 4 78 0 8 1123 566 115 0 9 chr17 70572888 70572993 -24699658 + L1_Mus4 LINE L1 6527 6630 -6 8 1123 1106 258 158 6 chr17 70573220 70573638 -24699013 - MT2A LTR ERVL -42 513 16 9 1123 21 0 0 0 chr17 70573911 70573932 -24698719 + AT_rich Low_complexity Low_complexity 1 21 0 9 1123 887 225 92 46 chr17 70574070 70574118 -24698533 - MT2A LTR ERVL -2 582 526 9 1123 411 21 0 0 chr17 70574118 70574166 -24698485 + (TG)n Simple_repeat Simple_repeat 1 48 0 9 1123 938 201 93 96 chr17 70574166 70574555 -24698096 - MT2A LTR ERVL -59 525 1 9 1123 224 302 31 16 chr17 70574555 70574611 -24698040 - RSINE1 SINE B4 -82 83 27 9 1123 2649 67 3 19 chr17 70574764 70575131 -24697520 + L1Md_F2 LINE L1 6209 6569 -13 9 1123 716 318 61 75 chr17 70575258 70575669 -24696982 - MTD LTR MaLR -14 405 1 9 1123 26 30 0 0 chr17 70576509 70576542 -24696109 + AT_rich Low_complexity Low_complexity 1 33 0 9 1123 21 0 0 0 chr17 70576918 70576939 -24695712 + AT_rich Low_complexity Low_complexity 1 21 0 9 1123 314 293 86 8 chr17 70577885 70578002 -24694649 + L1MC2 LINE L1 3963 4088 -2058 9 1123 3208 26 11 0 chr17 70578004 70578381 -24694270 - L1Md_F2 LINE L1 -11 6571 6191 1 1123 1734 29 0 0 chr17 70578384 70578594 -24694057 + L1Md_F2 LINE L1 5589 5798 -784 1 1123 33826 35 1 0 chr17 70578662 70584981 -24687670 + L1Md_T LINE L1 1 5589 -297 1 1123 9013 6 0 0 chr17 70584981 70586023 -24686628 + L1Md_T LINE L1 5590 6585 0 1 1123 21 0 0 0 chr17 70586033 70586054 -24686597 + AT_rich Low_complexity Low_complexity 1 21 0 1 1123 8512 73 43 5 chr17 70586054 70587301 -24685350 - Lx3_Mus LINE L1 0 7009 5715 1 1123 358 310 155 37 chr17 70587316 70587995 -24684656 + L1MC2 LINE L1 4170 4927 -1219 9 1123 887 276 112 3 chr17 70588064 70588387 -24684264 - Lx7 LINE L1 -564 7132 6775 1 1123 406 327 0 0 chr17 70588388 70588541 -24684110 + Lx7 LINE L1 7149 7301 -395 1 1123 2630 67 0 3 chr17 70588605 70588948 -24683703 - L1_Mus1 LINE L1 -1 6566 6225 1 1123 545 173 0 52 chr17 70588950 70589084 -24683567 - L1Md_F2 LINE L1 0 6582 6456 1 1123 29112 116 36 4 chr17 70589191 70592899 -24679752 + L1_Mus1 LINE L1 380 4208 -1675 1 1123 207 0 0 0 chr17 70592899 70592922 -24679729 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 1123 29112 86 28 2 chr17 70592922 70595204 -24677447 + L1_Mus1 LINE L1 4209 6557 -10 1 1123 27 49 0 0 chr17 70595230 70595271 -24677380 + AT_rich Low_complexity Low_complexity 1 41 0 1 1123 1198 320 68 20 chr17 70595361 70596120 -24676531 + L1MC2 LINE L1 5440 6235 -109 9 1123 1039 16 8 8 chr17 70598667 70598797 -24673854 + (TC)n Simple_repeat Simple_repeat 2 131 0 1 1123 285 51 0 0 chr17 70598797 70598835 -24673816 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1123 207 0 0 0 chr17 70598849 70598872 -24673779 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1123 6890 48 2 14 chr17 70600025 70600932 -24671719 - L1Md_F2 LINE L1 -12 6570 5675 1 1123 549 315 50 75 chr17 70600960 70601159 -24671492 - B3A SINE B2 -4 194 1 1 1123 1776 152 34 34 chr17 70602267 70602593 -24670058 + ORR1A2 LTR MaLR 1 326 -1 1 1123 201 74 0 0 chr17 70603271 70603298 -24669353 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 1 1123 1565 220 71 65 chr17 70603298 70603952 -24668699 + RLTR31_Mur LTR ERVK 11 553 0 1 1123 198 128 0 0 chr17 70605277 70605316 -24667335 + (TAAAAA)n Simple_repeat Simple_repeat 3 41 0 1 1123 580 288 71 0 chr17 70606100 70606284 -24666367 + Tigger16a DNA Tigger 733 929 -4 1 1123 181 314 76 0 chr17 70606954 70607059 -24665592 + L2c LINE L2 1669 1781 -1638 1 1123 251 308 0 44 chr17 70608723 70608791 -24663860 + B4A SINE B4 82 146 -146 1 1123 321 219 83 119 chr17 70608739 70608792 -24663859 + PB1D7 SINE Alu 10 61 -59 1 1123 4554 59 7 3 chr17 70608792 70609383 -24663268 - L1Md_F2 LINE L1 0 6582 5990 1 1123 321 219 83 119 chr17 70609383 70609438 -24663213 + PB1D7 SINE Alu 62 114 -6 1 1123 215 271 149 0 chr17 70610424 70610531 -24662120 + L2c LINE L2 3116 3238 -149 1 1123 217 89 0 43 chr17 70611227 70611274 -24661377 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 1 1123 571 239 24 36 chr17 70611282 70611447 -24661204 + B3A SINE B2 29 191 -7 1 1123 1063 100 0 0 chr17 70611538 70611678 -24660973 + B1_Mus1 SINE Alu 2 141 -7 1 1123 22 0 0 0 chr17 70612284 70612306 -24660345 + AT_rich Low_complexity Low_complexity 1 22 0 1 1123 794 233 73 101 chr17 70612925 70613113 -24659538 + B4 SINE B4 52 255 -37 1 1123 1507 139 5 0 chr17 70613113 70613336 -24659315 - URR1B DNA MER1_type 0 225 2 1 1123 794 233 73 101 chr17 70613336 70613395 -24659256 + B4 SINE B4 256 292 0 1 1123 210 128 0 0 chr17 70613402 70613441 -24659210 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1123 22 0 0 0 chr17 70613682 70613704 -24658947 + AT_rich Low_complexity Low_complexity 1 22 0 1 1123 615 252 25 38 chr17 70614190 70614347 -24658304 + RSINE1 SINE B4 11 165 0 1 1123 620 324 61 5 chr17 70614766 70614980 -24657671 + B4A SINE B4 39 264 -28 1 1123 360 64 0 0 chr17 70614980 70615027 -24657624 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1123 415 316 138 20 chr17 70616049 70616252 -24656399 + B4A SINE B4 2 228 -64 1 1123 1834 177 226 29 chr17 70617792 70618234 -24654417 - MT2A LTR ERVL -2 531 3 1 1123 233 210 0 0 chr17 70619277 70619339 -24653312 + C-rich Low_complexity Low_complexity 118 179 0 1 1123 252 270 87 32 chr17 70620193 70620411 -24652240 + L1MA7 LINE L1 6057 6286 -5 1 1123 2236 45 77 0 chr17 70622914 70623200 -24649451 - L1Md_T LINE L1 -1 6581 6274 1 1123 385 339 56 79 chr17 70623214 70623480 -24649171 - ORR1E LTR MaLR -95 264 5 1 1123 420 213 16 8 chr17 70623501 70623624 -24649027 + CT-rich Low_complexity Low_complexity 1 124 0 1 1123 22 0 0 0 chr17 70623706 70623728 -24648923 + AT_rich Low_complexity Low_complexity 1 22 0 1 1123 621 0 0 0 chr17 70623959 70624028 -24648623 + (TC)n Simple_repeat Simple_repeat 2 70 0 1 1123 226 283 50 0 chr17 70625077 70625137 -24647514 - ID4_ SINE ID -20 63 1 1 1123 540 303 21 0 chr17 70625157 70625302 -24647349 - B1_Mur1 SINE Alu -1 148 1 1 1123 698 283 142 55 chr17 70625528 70626142 -24646509 - L1MC2 LINE L1 -117 6227 5561 1 1123 525 295 53 16 chr17 70626186 70626471 -24646180 - L1MC2 LINE L1 -1192 4948 4661 1 1123 368 325 57 68 chr17 70626480 70626656 -24645995 - MT2A LTR ERVL -13 541 330 1 1123 15900 166 54 8 chr17 70627451 70631465 -24641186 + L1VL4 LINE L1 466 4875 -1011 1 1123 7157 98 3 3 chr17 70631460 70632658 -24639993 + L1_Mus4 LINE L1 5432 6628 -8 1 1123 351 0 0 0 chr17 70633630 70633669 -24638982 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1123 22 0 0 0 chr17 70633795 70633817 -24638834 + AT_rich Low_complexity Low_complexity 1 22 0 1 1123 811 272 12 39 chr17 70633837 70634093 -24638558 - Lx7 LINE L1 -358 7338 7090 1 1123 509 331 108 43 chr17 70634280 70634750 -24637901 - MER34A1 LTR ERV1 -86 501 1 1 1123 245 216 68 0 chr17 70635963 70636037 -24636614 + L3 LINE CR1 2113 2191 -2298 1 1123 1357 261 52 41 chr17 70636655 70637023 -24635628 - MTE2a LTR MaLR -7 372 1 1 1123 214 360 34 48 chr17 70637223 70637388 -24635263 - MIR SINE MIR -84 184 16 1 1123 1318 48 0 12 chr17 70637585 70637753 -24634898 - B2_Mm2 SINE B2 -28 167 2 1 1123 206 327 48 9 chr17 70637878 70637983 -24634668 + MIRb SINE MIR 87 195 -73 1 1123 369 0 0 0 chr17 70639437 70639478 -24633173 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1123 916 170 0 200 chr17 70639614 70639879 -24632772 + RLTR24 LTR ERV1 74 285 -244 1 1123 237 139 0 0 chr17 70639880 70639923 -24632728 + (CCCCCT)n Simple_repeat Simple_repeat 5 47 0 1 1123 796 253 82 3 chr17 70640515 70640832 -24631819 + Lx9 LINE L1 7302 7643 -1 1 1123 5463 94 64 48 chr17 70641268 70642712 -24629939 - L1_Mus2 LINE L1 0 6566 5100 1 1123 21 36 0 0 chr17 70644435 70644463 -24628188 + AT_rich Low_complexity Low_complexity 1 28 0 1 1123 2190 192 63 31 chr17 70644866 70645377 -24627274 + RLTR11A2 LTR ERVK 1 527 0 1 1123 300 246 65 8 chr17 70645626 70645749 -24626902 - Lx7 LINE L1 -3 7693 7564 1 1123 268 121 0 49 chr17 70645768 70645829 -24626822 + GA-rich Low_complexity Low_complexity 4 61 0 1 1123 752 188 78 56 chr17 70645837 70646068 -24626583 - Lx7 LINE L1 -264 7432 7197 1 1123 991 276 78 6 chr17 70646056 70646416 -24626235 - Lx7 LINE L1 -616 7080 6695 1 1123 465 282 191 41 chr17 70646506 70646820 -24625831 - L1MDb LINE L1 -5032 1377 1017 1 1123 5011 68 18 0 chr17 70646846 70647498 -24625153 - L1Md_F2 LINE L1 -12 6570 5907 1 1123 1576 60 0 0 chr17 70647498 70647714 -24624937 + L1_Mm LINE L1 4266 4481 -1402 1 1123 656 24 0 0 chr17 70647709 70647791 -24624860 + L1_Mm LINE L1 2953 3034 -2849 1 140 5108 40 1 1 chr17 70647788 70648437 -24624214 + L1_Mm LINE L1 5235 5883 0 1 1124 879 148 12 17 chr17 70648457 70648622 -24624029 + MTC LTR MaLR 32 211 -210 1 1124 1040 78 0 0 chr17 70648617 70648759 -24623892 + B1_Mus2 SINE Alu 6 147 0 1 1124 1149 157 71 0 chr17 70648776 70648974 -24623677 + MTC LTR MaLR 210 421 0 1 1124 2355 137 49 15 chr17 70649405 70649813 -24622838 + Lx2 LINE L1 6570 6991 -6 1 1124 320 330 45 9 chr17 70651800 70651910 -24620741 + L2a LINE L2 3311 3424 -2 1 1124 370 245 49 39 chr17 70652398 70652500 -24620151 + MIR SINE MIR 57 159 -103 1 1124 180 349 75 0 chr17 70652597 70652703 -24619948 + MIR SINE MIR 133 246 -16 1 1124 227 167 18 18 chr17 70653319 70653374 -24619277 + (TAAA)n Simple_repeat Simple_repeat 4 58 0 1 1124 280 0 0 48 chr17 70654371 70654413 -24618238 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 1 1124 429 20 0 0 chr17 70654831 70654881 -24617770 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1124 250 292 134 10 chr17 70655243 70655340 -24617311 + PB1D10 SINE Alu 1 109 -8 1 1124 479 237 28 173 chr17 70656871 70657085 -24615566 - B3A SINE B2 -15 183 1 1 1124 215 146 49 0 chr17 70658629 70658670 -24613981 + MIRc SINE MIR 214 256 -12 1 1124 206 182 23 0 chr17 70658759 70658803 -24613848 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 1124 522 43 0 0 chr17 70659078 70659147 -24613504 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 1 1124 405 214 0 0 chr17 70659259 70659357 -24613294 + CT-rich Low_complexity Low_complexity 1 98 0 1 1124 266 180 16 47 chr17 70660419 70660483 -24612168 + B1_Mur1 SINE Alu 82 143 -6 1 1124 457 236 291 0 chr17 70660529 70660694 -24611957 - B3 SINE B2 0 216 4 1 1124 321 174 31 0 chr17 70660781 70660879 -24611772 + (TGGA)n Simple_repeat Simple_repeat 3 103 0 1 1124 16018 129 3 6 chr17 70660879 70663522 -24609129 - L1_Mm LINE L1 -883 5000 2366 1 1124 511 307 25 74 chr17 70664187 70664349 -24608302 + B4A SINE B4 1 154 -138 1 1124 951 30 23 0 chr17 70664396 70664527 -24608124 + (GA)n Simple_repeat Simple_repeat 2 135 0 1 1124 371 83 17 0 chr17 70664527 70664587 -24608064 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 1124 729 286 24 14 chr17 70664614 70664823 -24607828 + B3 SINE B2 2 212 -4 1 1124 318 307 139 0 chr17 70665533 70665634 -24607017 + B1F2 SINE Alu 5 119 -30 1 1124 267 175 111 0 chr17 70666984 70667002 -24605649 - B1_Mus2 SINE Alu -5 142 118 1 1124 221 0 0 33 chr17 70667002 70667032 -24605619 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1124 241 182 0 0 chr17 70667032 70667076 -24605575 - B1_Mus2 SINE Alu -31 116 73 1 1124 516 278 154 5 chr17 70667098 70667293 -24605358 + MTD LTR MaLR 151 374 -45 1 1124 278 26 0 25 chr17 70667948 70667988 -24604663 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2 1124 1008 122 0 27 chr17 70667988 70668168 -24604483 - Lx2 LINE L1 -12 6985 6811 2 1124 3520 260 64 27 chr17 70668308 70669385 -24603266 - Lx9 LINE L1 -286 7358 6242 2 1124 370 155 277 25 chr17 70669432 70669551 -24603100 - L1_Rod LINE L1 -48 5799 5651 2 1124 246 329 51 0 chr17 70669822 70669901 -24602750 - ID4 SINE ID 0 83 1 2 1124 975 295 71 43 chr17 70670312 70670915 -24601736 - L1MA6 LINE L1 0 6300 5681 2 1124 197 308 94 19 chr17 70671009 70671115 -24601536 - MIR SINE MIR -25 237 124 2 1124 247 306 26 26 chr17 70672242 70672356 -24600295 - MIR SINE MIR -104 158 45 2 1124 36086 35 1 0 chr17 70672997 70678416 -24594235 + L1Md_T LINE L1 71 5589 -297 2 1124 9131 7 0 0 chr17 70678416 70679412 -24593239 + L1Md_T LINE L1 5590 6585 0 2 1124 198 0 0 0 chr17 70680143 70680165 -24592486 + (TTAA)n Simple_repeat Simple_repeat 2 23 0 2 1124 207 0 0 0 chr17 70681662 70681685 -24590966 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 2 1124 347 293 0 0 chr17 70681685 70681767 -24590884 - PB1D10 SINE Alu -15 102 21 2 1124 247 164 16 16 chr17 70681772 70681834 -24590817 + GA-rich Low_complexity Low_complexity 3 64 0 2 1124 492 18 0 0 chr17 70683149 70683206 -24589445 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 1124 3198 79 2 0 chr17 70684188 70684592 -24588059 - MTB_Mm LTR MaLR 0 407 3 2 1124 468 344 81 62 chr17 70686683 70687324 -24585327 + L1M4b LINE L1 283 935 -6399 2 1124 352 309 21 0 chr17 70687835 70687932 -24584719 + PB1D10 SINE Alu 1 99 -18 2 1124 260 244 24 12 chr17 70688067 70688150 -24584501 + L1M4b LINE L1 1335 1418 -5916 2 1124 289 238 24 0 chr17 70688150 70688234 -24584417 - MLT1B LTR MaLR 0 390 305 2 1124 380 333 0 0 chr17 70688413 70688563 -24584088 - MLT1B LTR MaLR -240 150 1 2 1124 515 250 51 14 chr17 70688597 70688735 -24583916 - B1F SINE Alu -6 143 1 2 1124 343 322 27 0 chr17 70688739 70688885 -24583766 + L1M4b LINE L1 1446 1595 -5739 2 1124 323 241 91 11 chr17 70688979 70689067 -24583584 + B1F SINE Alu 49 143 -6 2 1124 316 298 147 0 chr17 70689184 70689402 -24583249 + L1M4b LINE L1 1981 2230 -5104 2 1124 1221 61 0 0 chr17 70689483 70689630 -24583021 + B1_Mus1 SINE Alu 2 148 0 2 1124 364 225 8 83 chr17 70690406 70690527 -24582124 - L1MB8 LINE L1 -1 6177 6066 2 1124 378 0 0 0 chr17 70691321 70691363 -24581288 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1124 367 225 7 7 chr17 70692036 70692056 -24580595 + polypyrimidine Low_complexity Low_complexity 133 152 0 2 1124 585 0 0 0 chr17 70692056 70692121 -24580530 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 2 1124 367 225 7 7 chr17 70692121 70692252 -24580399 + CT-rich Low_complexity Low_complexity 2 132 0 2 1124 721 244 71 0 chr17 70692579 70692776 -24579875 + B3 SINE B2 1 211 -5 2 1124 240 250 25 38 chr17 70694170 70694249 -24578402 - MTEa LTR MaLR -12 367 290 2 1124 308 270 0 0 chr17 70694560 70694623 -24578028 + B1F2 SINE Alu 2 64 -85 2 1124 222 62 0 0 chr17 70695332 70695364 -24577287 + (TGAG)n Simple_repeat Simple_repeat 3 34 0 2 1124 387 256 0 0 chr17 70696207 70696297 -24576354 - B1F1 SINE Alu -5 144 55 2 1124 259 241 56 35 chr17 70699252 70699394 -24573257 + Lx9 LINE L1 7491 7635 -9 2 1124 19155 45 8 1 chr17 70699827 70702828 -24569823 - L1Md_F2 LINE L1 -4 6578 3558 2 1124 2088 165 88 121 chr17 70702884 70703430 -24569221 - RLTR11A LTR ERVK 0 528 1 2 1124 730 301 25 74 chr17 70703838 70704161 -24568490 + MTEa LTR MaLR 68 374 -5 2 1124 192 217 0 0 chr17 70704265 70704311 -24568340 + GA-rich Low_complexity Low_complexity 2 47 0 2 1124 263 311 0 0 chr17 70704443 70704504 -24568147 + MER2 DNA MER2_type 1 61 -284 2 1124 342 264 215 11 chr17 70704576 70704757 -24567894 + MER2 DNA MER2_type 117 334 -11 2 1124 618 51 0 0 chr17 70705421 70705499 -24567152 + (GA)n Simple_repeat Simple_repeat 1 78 0 2 1124 354 317 42 30 chr17 70705851 70706017 -24566634 - Lx8 LINE L1 -462 7011 6844 2 1124 195 42 0 0 chr17 70706851 70706875 -24565776 + (TC)n Simple_repeat Simple_repeat 1 24 0 2 1124 447 112 0 0 chr17 70706877 70706957 -24565694 + (TG)n Simple_repeat Simple_repeat 2 81 0 2 1124 805 151 6 11 chr17 70706974 70707155 -24565496 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1124 639 174 0 0 chr17 70707203 70707347 -24565304 + (TG)n Simple_repeat Simple_repeat 1 144 0 2 1124 2265 94 31 0 chr17 70707814 70708134 -24564517 - Lx3_Mus LINE L1 0 7009 6680 2 1124 719 245 42 85 chr17 70708135 70708394 -24564257 + Lx4B LINE L1 6810 7057 -1 2 1124 1591 31 0 40 chr17 70708404 70708603 -24564048 + B2_Mm1a SINE B2 2 192 -1 2 1124 188 0 74 0 chr17 70708603 70708630 -24564021 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 2 1124 181 337 94 37 chr17 70708982 70709173 -24563478 - MIR SINE MIR -21 241 40 2 1124 839 215 161 0 chr17 70709221 70709407 -24563244 - B3 SINE B2 0 216 1 2 1124 396 0 0 0 chr17 70709434 70709478 -24563173 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1124 862 299 112 35 chr17 70709933 70710533 -24562118 + L1MD LINE L1 2226 2871 -3275 2 1124 408 251 153 6 chr17 70710653 70710829 -24561822 + RMER5 LTR ERV1 267 468 -66 2 1124 316 240 47 19 chr17 70711468 70711574 -24561077 + GA-rich Low_complexity Low_complexity 4 112 0 2 1124 29 0 0 0 chr17 70712130 70712159 -24560492 + AT_rich Low_complexity Low_complexity 1 29 0 2 1124 396 104 0 0 chr17 70713509 70713576 -24559075 + (GA)n Simple_repeat Simple_repeat 2 68 0 2 1124 273 29 0 0 chr17 70713619 70713653 -24558998 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 1124 1002 231 35 163 chr17 70713842 70714022 -24558629 + ORR1D2 LTR MaLR 1 165 -205 2 1124 1120 106 6 6 chr17 70714022 70714202 -24558449 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 2 1124 1002 231 35 163 chr17 70714202 70714445 -24558206 + ORR1D2 LTR MaLR 166 370 0 2 1124 11681 70 48 5 chr17 70714755 70716489 -24556162 - RLTR22_Mus LTR ERVK 0 1808 1 2 1124 847 248 87 15 chr17 70717079 70717345 -24555306 - B4 SINE B4 -7 285 1 2 1124 711 196 105 0 chr17 70717400 70717553 -24555098 - MTE2a LTR MaLR -7 372 204 2 1124 1929 252 36 41 chr17 70717556 70717881 -24554770 + Lx6 LINE L1 6927 7257 -203 2 1124 243 0 0 0 chr17 70717881 70717908 -24554743 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1124 1250 35 0 0 chr17 70717908 70718052 -24554599 - B1_Mus1 SINE Alu -2 146 3 2 1124 1929 252 36 41 chr17 70718052 70718258 -24554393 + Lx6 LINE L1 7258 7455 -5 2 1124 450 265 24 81 chr17 70718276 70718535 -24554116 - MTE2a LTR MaLR -163 216 1 2 1124 315 0 0 0 chr17 70718975 70719010 -24553641 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1124 414 0 0 0 chr17 70719010 70719055 -24553596 + (GA)n Simple_repeat Simple_repeat 2 47 0 2 1124 913 152 0 7 chr17 70719830 70720111 -24552540 + GA-rich Low_complexity Low_complexity 1 278 0 2 1124 207 0 0 0 chr17 70720816 70720839 -24551812 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2 1124 21 0 0 0 chr17 70720871 70720892 -24551759 + AT_rich Low_complexity Low_complexity 1 21 0 2 1124 654 219 85 28 chr17 70722385 70722526 -24550125 + B1_Mur2 SINE Alu 1 149 0 2 1124 456 104 0 0 chr17 70722842 70722909 -24549742 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 1124 272 156 22 0 chr17 70722912 70722957 -24549694 - RSINE1 SINE B4 -38 127 82 2 1124 297 329 64 45 chr17 70722958 70723114 -24549537 - B4A SINE B4 -132 160 2 2 1124 184 336 103 0 chr17 70723535 70723642 -24549009 + MIRb SINE MIR 84 201 -67 2 1124 23 0 0 0 chr17 70723675 70723698 -24548953 + AT_rich Low_complexity Low_complexity 1 23 0 2 1124 204 40 0 0 chr17 70724726 70724751 -24547900 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1124 266 50 0 24 chr17 70724799 70724840 -24547811 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1124 232 296 0 0 chr17 70725005 70725059 -24547592 + B4A SINE B4 87 140 -152 2 1124 538 226 122 0 chr17 70725012 70725127 -24547524 + B1_Mur1 SINE Alu 9 137 -12 2 1124 403 247 134 48 chr17 70726824 70727011 -24545640 + B3 SINE B2 1 203 -13 2 1124 1286 41 0 20 chr17 70728661 70728811 -24543840 - B1_Mm SINE Alu 0 147 1 2 1124 3824 97 8 2 chr17 70728828 70729322 -24543329 - L1_Mus3 LINE L1 -5 6633 6137 2 1124 216 200 0 0 chr17 70730088 70730138 -24542513 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1124 1020 146 0 8 chr17 70731442 70731698 -24540953 + (TGGA)n Simple_repeat Simple_repeat 1 254 0 2 1124 1331 302 17 11 chr17 70731734 70732089 -24540562 + MTEa LTR MaLR 10 366 -13 2 1124 446 132 29 29 chr17 70733327 70733397 -24539254 - ID4_ SINE ID -12 71 2 2 1124 248 355 60 60 chr17 70733435 70733552 -24539099 - PB1D10 SINE Alu 0 117 1 2 1124 1907 130 44 0 chr17 70733694 70733987 -24538664 + ORR1A3 LTR MaLR 21 326 0 2 1124 271 302 0 17 chr17 70734824 70734900 -24537751 + ID4 SINE ID 16 88 -64 2 1124 227 276 17 0 chr17 70736047 70736105 -24536546 - ID4 SINE ID -11 72 14 2 1124 467 45 15 0 chr17 70736945 70737011 -24535640 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 2 1124 646 236 90 6 chr17 70737668 70737834 -24534817 - Lx6 LINE L1 -10 7450 7271 2 1124 25 31 0 0 chr17 70738115 70738147 -24534504 + AT_rich Low_complexity Low_complexity 1 32 0 2 1124 2212 196 61 148 chr17 70740128 70740355 -24532296 - RLTR40 LTR ERVK -30 787 597 2 1124 414 85 0 0 chr17 70740355 70740414 -24532237 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1124 2212 196 61 148 chr17 70740414 70740928 -24531723 - RLTR40 LTR ERVK -221 596 111 2 1124 507 218 165 0 chr17 70741072 70741205 -24531446 - RLTR40 LTR ERVK -662 155 1 2 1124 462 341 82 42 chr17 70741403 70741783 -24530868 - MER34 LTR ERV1 -39 503 109 2 1124 1705 166 108 9 chr17 70743014 70743337 -24529314 - Lx4B LINE L1 -1 7057 6703 2 1124 618 106 183 0 chr17 70743471 70743575 -24529076 + B2_Mm2 SINE B2 3 125 -70 2 1124 354 74 0 0 chr17 70744801 70744855 -24527796 + (ATTG)n Simple_repeat Simple_repeat 2 55 0 2 1124 621 304 100 52 chr17 70745205 70745667 -24526984 + Lx8 LINE L1 6941 7424 -49 2 1124 531 165 0 0 chr17 70745972 70746081 -24526570 + (TAGA)n Simple_repeat Simple_repeat 4 112 0 2 1124 351 0 0 0 chr17 70746081 70746120 -24526531 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1124 603 126 0 0 chr17 70746121 70746216 -24526435 + (GA)n Simple_repeat Simple_repeat 2 96 0 3 1124 225 154 0 0 chr17 70746508 70746547 -24526104 + GA-rich Low_complexity Low_complexity 6 44 0 3 1124 324 183 305 0 chr17 70746855 70746937 -24525714 + PB1D10 SINE Alu 2 108 -9 3 1124 282 160 0 0 chr17 70747040 70747090 -24525561 + A-rich Low_complexity Low_complexity 1 50 0 3 1124 2212 131 38 9 chr17 70747540 70747880 -24524771 - Lx4A LINE L1 0 7058 6709 3 1124 290 331 54 27 chr17 70748359 70748545 -24524106 + L1MA6 LINE L1 6001 6191 -109 3 1124 428 266 32 0 chr17 70749200 70749294 -24523357 - B3 SINE B2 0 216 120 3 1124 192 40 0 0 chr17 70752034 70752059 -24520592 + (CCA)n Simple_repeat Simple_repeat 3 27 0 3 1124 342 0 0 0 chr17 70752059 70752097 -24520554 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1124 1456 42 0 0 chr17 70752283 70752451 -24520200 - L1_Mus1 LINE L1 -1 6566 6399 3 1124 240 27 79 26 chr17 70752454 70752492 -24520159 + L1_Mus2 LINE L1 6159 6198 -368 3 1124 322 269 111 57 chr17 70754590 70754852 -24517799 - Tigger7 DNA MER2_type 0 2491 2209 3 1124 217 308 31 0 chr17 70754888 70754953 -24517698 - B3 SINE B2 -149 67 1 3 1124 319 188 29 0 chr17 70754954 70755023 -24517628 - Tigger7 DNA MER2_type -2381 110 40 3 1124 225 0 0 0 chr17 70755202 70755227 -24517424 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3 1124 550 299 127 112 chr17 70755605 70756174 -24516477 + L1MA8 LINE L1 5508 6084 -207 3 1124 800 154 7 7 chr17 70756290 70756434 -24516217 + Lx2B LINE L1 6847 6990 -10 3 1124 911 268 30 51 chr17 70756718 70757013 -24515638 + B4A SINE B4 2 290 -2 3 1124 226 229 0 20 chr17 70757052 70757068 -24515583 + (CA)n Simple_repeat Simple_repeat 2 17 0 3 1124 378 0 0 0 chr17 70757068 70757110 -24515541 + (GA)n Simple_repeat Simple_repeat 2 43 0 3 1124 226 229 0 20 chr17 70757110 70757142 -24515509 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1124 348 268 120 105 chr17 70757947 70758205 -24514446 - RMER1C Other Other 0 1342 1081 3 1124 1122 250 241 30 chr17 70757984 70758561 -24514090 - Lx8 LINE L1 -10 7463 6765 3 1124 312 260 64 46 chr17 70758687 70758796 -24513855 - MER2 DNA MER2_type -117 228 118 3 1124 352 286 0 0 chr17 70760149 70760226 -24512425 + ID_B1 SINE B4 90 166 -58 3 1124 245 75 25 0 chr17 70760302 70760342 -24512309 + (TTG)n Simple_repeat Simple_repeat 2 42 0 3 1124 676 166 7 7 chr17 70761529 70761669 -24510982 + (TA)n Simple_repeat Simple_repeat 2 141 0 3 1124 2986 94 40 14 chr17 70761805 70762235 -24510416 + BGLII_B LTR ERVK 1 441 0 3 1124 234 0 0 0 chr17 70762440 70762466 -24510185 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 1124 180 0 0 0 chr17 70764395 70764415 -24508236 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1124 265 392 76 99 chr17 70764933 70765196 -24507455 + LTR16A LTR ERVL 22 278 -173 3 1124 736 179 212 0 chr17 70765803 70765987 -24506664 + URR1B DNA MER1_type 3 225 0 3 1124 219 321 48 36 chr17 70766300 70766384 -24506267 - L2b LINE L2 -8 3367 3283 3 1124 296 48 24 0 chr17 70767614 70767656 -24504995 + (TATG)n Simple_repeat Simple_repeat 2 44 0 3 1124 2104 107 3 65 chr17 70767656 70767977 -24504674 - Lx4A LINE L1 -13 7045 6745 3 1124 300 232 14 0 chr17 70768425 70768494 -24504157 + Lx9 LINE L1 7073 7142 -502 3 1124 1271 56 0 0 chr17 70769163 70769323 -24503328 + B2_Mm2 SINE B2 1 160 -35 3 1124 227 114 23 0 chr17 70769323 70769367 -24503284 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 3 1124 681 134 0 0 chr17 70769840 70769952 -24502699 + (TCC)n Simple_repeat Simple_repeat 1 112 0 3 1124 214 288 15 29 chr17 70770163 70770231 -24502420 + ID_B1 SINE B4 95 161 -63 3 1124 897 246 47 9 chr17 70770487 70770700 -24501951 + ID_B1 SINE B4 1 221 -3 3 1124 263 232 54 0 chr17 70770719 70770775 -24501876 + MTE2a LTR MaLR 6 64 -315 3 1124 260 0 57 0 chr17 70770782 70770817 -24501834 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 3 1124 234 156 0 0 chr17 70771085 70771130 -24501521 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1124 651 13 0 0 chr17 70771136 70771212 -24501439 + (TG)n Simple_repeat Simple_repeat 1 76 0 3 1124 1308 230 110 17 chr17 70771426 70771718 -24500933 - Lx6 LINE L1 -179 7281 6963 3 1124 795 287 40 100 chr17 70771734 70772063 -24500588 + MTE2a LTR MaLR 70 378 -1 3 1124 195 114 0 0 chr17 70772253 70772288 -24500363 + (A)n Simple_repeat Simple_repeat 1 35 0 3 1124 309 136 0 0 chr17 70774374 70774418 -24498233 + HAL1-3A_ME LINE L1 1969 2012 -846 3 1124 231 186 0 0 chr17 70774423 70774466 -24498185 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 1124 520 186 16 24 chr17 70774477 70774740 -24497911 + (CA)n Simple_repeat Simple_repeat 1 260 0 3 1124 306 310 0 0 chr17 70774812 70774883 -24497768 + ID4_ SINE ID 2 72 -11 3 1124 207 0 0 0 chr17 70775049 70775072 -24497579 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1124 210 264 19 0 chr17 70775698 70775751 -24496900 + GA-rich Low_complexity Low_complexity 1 54 0 3 1124 229 151 0 36 chr17 70776457 70776512 -24496139 + GA-rich Low_complexity Low_complexity 3 55 0 3 1124 528 285 87 25 chr17 70777068 70777309 -24495342 + Tigger5 DNA MER2_type 2151 2406 0 3 1124 347 253 126 29 chr17 70777994 70778169 -24494482 - Tigger7 DNA MER2_type -10 2481 2290 3 1124 180 0 0 0 chr17 70778177 70778197 -24494454 + (TC)n Simple_repeat Simple_repeat 1 20 0 3 1124 547 333 26 43 chr17 70778216 70778448 -24494203 - Tigger7 DNA MER2_type -2263 228 1 3 1124 1181 34 0 20 chr17 70778635 70778784 -24493867 + B1_Mm SINE Alu 2 147 0 3 1124 306 0 0 0 chr17 70778817 70778851 -24493800 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 140 465 19 0 0 chr17 70778851 70778904 -24493747 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1125 212 171 0 0 chr17 70779456 70779497 -24493154 + A-rich Low_complexity Low_complexity 1 41 0 3 1125 230 73 24 0 chr17 70779801 70779842 -24492809 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 3 1125 343 192 27 96 chr17 70780523 70780646 -24492005 - PB1D10 SINE Alu -3 114 1 3 1125 387 0 0 0 chr17 70780838 70780881 -24491770 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1125 315 0 0 0 chr17 70780881 70780915 -24491736 + (GA)n Simple_repeat Simple_repeat 1 35 0 3 1125 337 219 27 13 chr17 70783287 70783376 -24489275 + B1_Mus1 SINE Alu 32 122 -27 3 1125 315 49 0 0 chr17 70783376 70783417 -24489234 + (CAA)n Simple_repeat Simple_repeat 2 42 0 3 1125 449 292 30 64 chr17 70783464 70783698 -24488953 + Lx7 LINE L1 7138 7363 -333 3 1125 606 280 31 31 chr17 70783877 70784039 -24488612 + RSINE1 SINE B4 3 164 -1 3 1125 251 314 6 0 chr17 70784041 70784197 -24488454 + (CA)n Simple_repeat Simple_repeat 2 158 0 3 1125 261 0 0 0 chr17 70784260 70784289 -24488362 + (A)n Simple_repeat Simple_repeat 1 29 0 3 1125 308 139 0 12 chr17 70785176 70785256 -24487395 + T-rich Low_complexity Low_complexity 2 80 0 3 1125 751 138 0 0 chr17 70786282 70786412 -24486239 + Lx LINE L1 6518 6647 -7 3 1125 442 303 150 9 chr17 70787787 70788000 -24484651 + L1MA8 LINE L1 6047 6289 -2 3 1125 1278 124 0 0 chr17 70788932 70789118 -24483533 - B2_Mm2 SINE B2 -9 186 1 3 1125 261 264 36 36 chr17 70789291 70789401 -24483250 + MTEb LTR MaLR 266 375 -4 3 1125 1130 245 18 57 chr17 70789506 70789839 -24482812 - ORR1D2 LTR MaLR -1 369 50 3 1125 22 35 0 0 chr17 70791319 70791348 -24481303 + AT_rich Low_complexity Low_complexity 1 29 0 3 1125 309 117 49 16 chr17 70792779 70792840 -24479811 - ORR1B1 LTR MaLR -8 386 324 3 1125 681 234 172 26 chr17 70792844 70793077 -24479574 - Lx2B LINE L1 -10 6990 6724 3 1125 1714 132 48 6 chr17 70793077 70793390 -24479261 - ORR1B1 LTR MaLR -68 326 1 3 1125 571 289 2 21 chr17 70793817 70794219 -24478432 + C-rich Low_complexity Low_complexity 1 394 0 3 1125 408 277 0 48 chr17 70794212 70794451 -24478200 + C-rich Low_complexity Low_complexity 1 227 0 3 1125 207 210 160 0 chr17 70794416 70794535 -24478116 + (CATCC)n Simple_repeat Simple_repeat 4 141 0 3 1125 454 277 0 43 chr17 70794492 70794677 -24477974 + C-rich Low_complexity Low_complexity 4 180 0 3 1125 184 256 0 31 chr17 70794709 70794870 -24477781 + CT-rich Low_complexity Low_complexity 2 157 0 3 1125 222 261 22 33 chr17 70794872 70794963 -24477688 + C-rich Low_complexity Low_complexity 4 93 0 3 1125 330 26 0 0 chr17 70796414 70796453 -24476198 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 1125 603 286 72 24 chr17 70796913 70797121 -24475530 - B4A SINE B4 -73 219 2 3 1125 233 279 132 54 chr17 70797213 70797342 -24475309 - MER5A DNA MER1_type -4 185 47 3 1125 2729 136 24 33 chr17 70797571 70797605 -24475046 - RLTR41 LTR ERV1 0 446 409 3 1125 222 37 0 0 chr17 70797605 70797632 -24475019 + (CCCCCA)n Simple_repeat Simple_repeat 3 29 0 3 1125 2729 136 24 33 chr17 70797632 70798047 -24474604 - RLTR41 LTR ERV1 -38 408 2 3 1125 270 0 0 0 chr17 70798110 70798140 -24474511 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1125 637 317 39 10 chr17 70798157 70798364 -24474287 - B4A SINE B4 -12 280 68 3 1125 394 327 144 0 chr17 70799372 70799525 -24473126 + B4 SINE B4 1 175 -117 3 1125 2232 169 47 92 chr17 70799545 70800098 -24472553 - RMER4B LTR ERVK -57 528 1 3 1125 828 194 52 143 chr17 70800817 70800891 -24471760 - B4A SINE B4 -12 280 216 3 1125 213 39 0 0 chr17 70800891 70800917 -24471734 + (TTTG)n Simple_repeat Simple_repeat 4 29 0 3 1125 828 194 52 143 chr17 70800917 70801068 -24471583 - B4A SINE B4 -77 215 81 3 1125 186 43 0 0 chr17 70801068 70801091 -24471560 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 3 1125 828 194 52 143 chr17 70801091 70801125 -24471526 - B4A SINE B4 -212 80 55 3 1125 2495 98 11 19 chr17 70801125 70801490 -24471161 - RLTR8 LTR ERVK -3 362 1 3 1125 828 194 52 143 chr17 70801490 70801535 -24471116 - B4A SINE B4 -238 54 2 3 1125 234 195 91 54 chr17 70802012 70802132 -24470519 + L1MA6 LINE L1 6067 6179 -112 3 1125 283 275 25 0 chr17 70802141 70802221 -24470430 + PB1D10 SINE Alu 29 110 -7 3 1125 290 159 22 22 chr17 70802305 70802395 -24470256 + GA-rich Low_complexity Low_complexity 3 92 0 3 1125 341 215 17 70 chr17 70802403 70802518 -24470133 + L1MA6 LINE L1 6187 6295 -5 3 1125 680 313 75 53 chr17 70802700 70803192 -24469459 - MLT1D LTR MaLR -2 503 1 4 1125 699 269 186 20 chr17 70803252 70803746 -24468905 - L1MEc LINE L1 -4838 1562 987 4 1125 288 209 104 0 chr17 70803802 70803869 -24468782 - PB1D7 SINE Alu -46 74 1 4 1125 227 213 65 16 chr17 70803814 70803876 -24468775 - B4 SINE B4 -148 144 80 4 1125 291 114 0 0 chr17 70803893 70803937 -24468714 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1125 551 240 53 40 chr17 70803937 70804089 -24468562 - B3A SINE B2 -44 154 1 4 1125 507 277 72 50 chr17 70804099 70804361 -24468290 - L1MEc LINE L1 -5575 825 558 4 1125 330 345 46 57 chr17 70804451 70804731 -24467920 - L1MEc LINE L1 -6042 358 82 4 1125 225 0 0 0 chr17 70807024 70807049 -24465602 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1125 240 60 39 39 chr17 70807129 70807181 -24465470 + (CAAAAA)n Simple_repeat Simple_repeat 2 53 0 4 1125 202 242 55 0 chr17 70809039 70809130 -24463521 + (TATAA)n Simple_repeat Simple_repeat 4 99 0 4 1125 218 231 0 15 chr17 70809147 70809213 -24463438 + (TATG)n Simple_repeat Simple_repeat 2 66 0 4 1125 232 294 68 10 chr17 70809248 70809351 -24463300 - LTR33A LTR ERVL -10 510 402 4 1125 570 283 53 16 chr17 70810155 70810303 -24462348 + B3A SINE B2 1 153 -45 4 1125 369 0 0 0 chr17 70810303 70810344 -24462307 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1125 570 283 53 16 chr17 70810344 70810385 -24462266 + B3A SINE B2 154 196 -2 4 1125 28 29 0 0 chr17 70810456 70810491 -24462160 + AT_rich Low_complexity Low_complexity 1 35 0 4 1125 26 0 0 0 chr17 70810554 70810580 -24462071 + AT_rich Low_complexity Low_complexity 1 26 0 4 1125 1658 51 17 0 chr17 70810724 70810959 -24461692 - MusHAL1 LINE L1 0 2712 2474 4 1125 210 143 0 0 chr17 70811959 70811994 -24460657 + (T)n Simple_repeat Simple_repeat 1 35 0 4 1125 383 294 6 84 chr17 70812900 70813078 -24459573 + RSINE1 SINE B4 2 165 0 4 1125 462 201 5 27 chr17 70813078 70813148 -24459503 + (CA)n Simple_repeat Simple_repeat 1 70 0 4 1125 1837 180 50 115 chr17 70813148 70813625 -24459026 - RLTR41 LTR ERV1 0 446 1 4 1125 462 201 5 27 chr17 70813625 70813738 -24458913 + (CA)n Simple_repeat Simple_repeat 1 110 0 4 1125 243 88 0 0 chr17 70813965 70813999 -24458652 + (T)n Simple_repeat Simple_repeat 1 34 0 4 1125 1208 68 0 0 chr17 70813999 70814146 -24458505 - B1_Mm SINE Alu 0 147 1 4 1125 793 233 6 6 chr17 70814213 70814377 -24458274 + B3A SINE B2 5 168 -30 4 1125 336 344 39 59 chr17 70814491 70814695 -24457956 - MLT1A1 LTR MaLR -206 202 3 4 1125 450 266 136 35 chr17 70814893 70815092 -24457559 + ID_B1 SINE B4 1 219 -5 4 1125 797 171 222 6 chr17 70815444 70815620 -24457031 - B3 SINE B2 -1 215 2 4 1125 263 79 26 0 chr17 70815638 70815676 -24456975 + (TTCC)n Simple_repeat Simple_repeat 3 41 0 4 1125 726 180 0 0 chr17 70815678 70815817 -24456834 + CT-rich Low_complexity Low_complexity 2 140 0 4 1125 383 265 98 8 chr17 70816626 70816759 -24455892 - MLT1F LTR MaLR -21 527 383 4 1125 331 361 30 37 chr17 70816785 70816949 -24455702 - MLT1F LTR MaLR -234 314 152 4 1125 244 374 9 0 chr17 70817944 70818051 -24454600 - L2a LINE L2 -5 3421 3314 4 1125 263 382 0 0 chr17 70818381 70818483 -24454168 + PB1D10 SINE Alu 10 111 -6 4 1125 6347 80 11 0 chr17 70821902 70822768 -24449883 + L1_Mm LINE L1 1978 2853 -3030 4 1125 1074 254 54 7 chr17 70824125 70824402 -24448249 + B4 SINE B4 3 292 0 4 1125 241 286 0 0 chr17 70824402 70824465 -24448186 + (CA)n Simple_repeat Simple_repeat 1 63 0 4 1125 1340 106 16 16 chr17 70825258 70825450 -24447201 - B2_Mm2 SINE B2 -3 192 1 4 1125 484 336 65 36 chr17 70825554 70825829 -24446822 - Tigger7 DNA MER2_type -2195 296 14 4 1125 8470 32 2 1 chr17 70825942 70827437 -24445214 - L1Md_F2 LINE L1 -12 6570 5075 4 1125 8010 82 13 1 chr17 70827459 70829080 -24443571 - L1_Mus3 LINE L1 0 6638 4999 4 1125 1829 79 67 21 chr17 70830068 70830351 -24442300 + MTB_Mm LTR MaLR 2 297 -110 4 1125 524 120 176 0 chr17 70830340 70830448 -24442203 + B2_Mm1t SINE B2 53 179 -14 4 1125 299 100 330 26 chr17 70830514 70830626 -24442025 + B2_Mm2 SINE B2 47 192 -3 4 1125 378 61 0 0 chr17 70832063 70832112 -24440539 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1125 255 61 0 0 chr17 70832670 70832703 -24439948 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 4 1125 1057 76 0 71 chr17 70832703 70832873 -24439778 - B2_Mm2 SINE B2 -37 158 1 4 1125 416 245 29 0 chr17 70833179 70833281 -24439370 + B3A SINE B2 1 105 -93 4 1125 430 317 35 0 chr17 70833603 70833745 -24438906 + RSINE1 SINE B4 6 152 -13 4 1125 330 115 0 0 chr17 70833777 70833838 -24438813 + (GA)n Simple_repeat Simple_repeat 2 62 0 4 1125 359 57 0 36 chr17 70834173 70834228 -24438423 + (CATA)n Simple_repeat Simple_repeat 2 54 0 4 1125 740 304 132 18 chr17 70835043 70835375 -24437276 - MTEa LTR MaLR -2 377 8 4 1125 432 214 23 8 chr17 70836674 70836806 -24435845 + (TATG)n Simple_repeat Simple_repeat 2 135 0 4 1125 188 135 27 0 chr17 70836806 70836843 -24435808 + GA-rich Low_complexity Low_complexity 2 39 0 4 1125 225 0 0 0 chr17 70836926 70836951 -24435700 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 4 1125 613 143 8 45 chr17 70836995 70837127 -24435524 - B2_Mm2 SINE B2 -1 194 68 4 1125 715 235 141 15 chr17 70837729 70837928 -24434723 + ID_B1 SINE B4 1 224 0 4 1125 1178 236 86 68 chr17 70839363 70839849 -24432802 + L1MA9 LINE L1 5287 5781 -510 4 1125 243 272 0 0 chr17 70839851 70839932 -24432719 + (CA)n Simple_repeat Simple_repeat 2 82 0 4 1125 270 292 171 14 chr17 70840017 70840331 -24432320 + L1MA9 LINE L1 5804 6170 -121 4 1125 852 251 19 0 chr17 70840400 70840611 -24432040 - B3 SINE B2 -1 215 1 4 1125 308 327 82 61 chr17 70840636 70840965 -24431686 - MTEa LTR MaLR -43 336 1 4 1125 398 262 9 9 chr17 70841660 70841768 -24430883 + PB1D10 SINE Alu 5 112 -5 4 1125 383 273 0 0 chr17 70841801 70841878 -24430773 + ID4 SINE ID 3 79 -4 4 1125 1437 46 0 11 chr17 70842363 70842539 -24430112 + B2_Mm2 SINE B2 3 176 -19 4 1125 456 242 32 0 chr17 70842972 70843095 -24429556 + Lx5 LINE L1 6341 6453 -597 4 1125 200 226 19 19 chr17 70843301 70843355 -24429296 - L2a LINE L2 -4 3422 3369 4 1125 23 33 0 0 chr17 70844984 70845014 -24427637 + AT_rich Low_complexity Low_complexity 1 30 0 4 1125 225 0 0 0 chr17 70845222 70845247 -24427404 + (TC)n Simple_repeat Simple_repeat 2 26 0 4 1125 581 40 13 0 chr17 70845247 70845322 -24427329 + (TA)n Simple_repeat Simple_repeat 2 78 0 4 1125 24 0 0 0 chr17 70845393 70845417 -24427234 + AT_rich Low_complexity Low_complexity 1 24 0 4 1125 315 259 120 0 chr17 70845945 70846053 -24426598 + PB1 SINE Alu 3 123 -4 4 1125 2033 156 55 0 chr17 70846072 70846470 -24426181 + Lx9 LINE L1 7225 7644 0 4 1125 510 230 37 11 chr17 70847492 70847635 -24425016 - ORR1D1 LTR MaLR -219 165 4 4 1125 32 26 0 0 chr17 70848029 70848068 -24424583 + AT_rich Low_complexity Low_complexity 1 39 0 4 1125 2619 55 6 0 chr17 70850848 70851173 -24421478 - ORR1A2 LTR MaLR 0 327 1 4 1125 273 259 44 66 chr17 70852501 70852592 -24420059 + MER5A DNA MER1_type 101 189 0 4 1125 388 235 123 43 chr17 70853072 70853210 -24419441 + B1_Mur1 SINE Alu 1 149 0 4 1125 243 161 0 0 chr17 70853877 70853933 -24418718 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 1125 540 214 0 0 chr17 70853948 70854126 -24418525 + (TG)n Simple_repeat Simple_repeat 1 178 0 4 1125 388 216 0 22 chr17 70854166 70854346 -24418305 + (TG)n Simple_repeat Simple_repeat 2 177 0 4 1125 1913 150 31 17 chr17 70854497 70854850 -24417801 - ORR1B2 LTR MaLR -9 358 1 4 1125 873 301 60 32 chr17 70854856 70855273 -24417378 + Tigger7 DNA MER2_type 23 469 -2022 4 1125 457 282 76 14 chr17 70855275 70855419 -24417232 + Tigger7 DNA MER2_type 2325 2477 -14 4 1125 243 88 0 0 chr17 70856291 70856325 -24416326 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1125 207 0 0 0 chr17 70857171 70857194 -24415457 + (CCCCCA)n Simple_repeat Simple_repeat 2 24 0 4 1125 378 0 0 0 chr17 70857462 70857504 -24415147 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1125 2520 64 3 50 chr17 70858052 70858395 -24414256 + ORR1A2 LTR MaLR 1 327 0 4 1125 400 331 118 0 chr17 70859585 70859754 -24412897 - MLT1J LTR MaLR -232 280 92 4 1125 768 205 12 24 chr17 70861194 70861364 -24411287 - URR1A DNA MER1_type 0 226 59 4 1125 26 0 0 0 chr17 70861922 70861948 -24410703 + AT_rich Low_complexity Low_complexity 1 26 0 4 1125 262 292 0 0 chr17 70862005 70862077 -24410574 - ID4_ SINE ID -10 73 2 4 1125 211 146 18 18 chr17 70862834 70862890 -24409761 + (CAAA)n Simple_repeat Simple_repeat 3 58 0 4 1125 21 0 0 0 chr17 70863411 70863432 -24409219 + AT_rich Low_complexity Low_complexity 1 21 0 4 1125 1311 62 97 0 chr17 70863598 70863774 -24408877 + B2_Mm2 SINE B2 3 195 0 4 1125 1314 96 26 11 chr17 70864005 70864195 -24408456 - B2_Mm2 SINE B2 0 195 3 4 1125 216 0 0 0 chr17 70864411 70864435 -24408216 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1125 234 218 0 18 chr17 70864707 70864763 -24407888 + B3A SINE B2 59 113 -85 4 1125 21 0 0 0 chr17 70864779 70864800 -24407851 + AT_rich Low_complexity Low_complexity 1 21 0 4 1125 315 206 119 10 chr17 70864973 70865081 -24407570 + PB1D10 SINE Alu 5 120 0 4 1125 957 199 0 0 chr17 70867359 70867520 -24405131 + B3 SINE B2 4 164 -52 4 1125 477 76 0 0 chr17 70867520 70867586 -24405065 + (CATA)n Simple_repeat Simple_repeat 1 66 0 4 1125 197 280 0 0 chr17 70867684 70867734 -24404917 - MIR SINE MIR -117 91 42 4 1125 825 66 205 0 chr17 70868276 70868398 -24404253 + B1_Mus1 SINE Alu 2 148 0 4 1125 23 33 0 0 chr17 70868835 70868865 -24403786 + AT_rich Low_complexity Low_complexity 1 30 0 4 1125 1865 9 0 0 chr17 70869311 70869521 -24403130 + L1Md_A LINE L1 6373 6582 0 4 1125 195 129 0 0 chr17 70871187 70871218 -24401433 + (T)n Simple_repeat Simple_repeat 1 31 0 5 1125 420 71 0 0 chr17 70871992 70872048 -24400603 + (TTG)n Simple_repeat Simple_repeat 2 57 0 5 1125 254 109 43 0 chr17 70872234 70872280 -24400371 + T-rich Low_complexity Low_complexity 1 48 0 5 1125 29 0 0 0 chr17 70872407 70872436 -24400215 + AT_rich Low_complexity Low_complexity 1 29 0 5 1125 648 208 0 0 chr17 70873105 70873322 -24399329 + (TG)n Simple_repeat Simple_repeat 1 217 0 5 1125 456 236 0 0 chr17 70873920 70874098 -24398553 + (CA)n Simple_repeat Simple_repeat 2 179 0 5 1125 216 178 0 0 chr17 70874101 70874146 -24398505 + (CTCA)n Simple_repeat Simple_repeat 2 46 0 5 1125 261 0 0 0 chr17 70874147 70874176 -24398475 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1125 482 46 0 15 chr17 70875709 70875775 -24396876 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1125 473 296 26 7 chr17 70875791 70875944 -24396707 - RSINE1 SINE B4 -8 157 2 5 1125 214 250 0 0 chr17 70878534 70878550 -24394101 + polypurine Low_complexity Low_complexity 4 19 0 5 1125 1116 133 0 0 chr17 70878550 70878730 -24393921 + (GA)n Simple_repeat Simple_repeat 1 180 0 5 1125 214 250 0 0 chr17 70878730 70878761 -24393890 + polypurine Low_complexity Low_complexity 20 50 0 5 1125 888 118 0 0 chr17 70878762 70878898 -24393753 + (GAAA)n Simple_repeat Simple_repeat 3 138 0 5 1125 32 26 0 0 chr17 70878934 70878973 -24393678 + AT_rich Low_complexity Low_complexity 1 39 0 5 1125 671 256 17 11 chr17 70879802 70879976 -24392675 - Lx8 LINE L1 -149 7324 7150 5 1125 260 321 42 24 chr17 70880041 70880207 -24392444 - L1MB8 LINE L1 -19 6159 5991 5 1125 243 235 148 30 chr17 70880227 70880328 -24392323 - L1M2 LINE L1 -342 5847 5735 5 1125 2850 274 93 79 chr17 70880479 70882690 -24389961 - L1M2 LINE L1 -673 5618 3373 5 1125 368 327 0 0 chr17 70882884 70882997 -24389654 - MTE2b LTR MaLR -265 114 2 5 1125 242 259 109 109 chr17 70882998 70883375 -24389276 - L1M2 LINE L1 -2795 3348 2972 5 1125 1052 178 13 44 chr17 70883375 70883604 -24389047 - ORR1C2 LTR MaLR -1 383 162 5 1125 561 244 113 130 chr17 70883652 70884128 -24388523 - L1M2 LINE L1 -3227 2916 2449 5 1125 653 229 0 46 chr17 70884285 70884436 -24388215 + B1_Mur3 SINE Alu 1 144 -5 5 1125 531 31 0 0 chr17 70884446 70884511 -24388140 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1125 491 292 81 45 chr17 70884521 70884743 -24387908 + B4A SINE B4 49 278 -14 5 1125 659 284 62 16 chr17 70884927 70885185 -24387466 - L1_Rod LINE L1 -30 5817 5548 5 1125 384 223 87 73 chr17 70885190 70885340 -24387311 - L1_Mur3 LINE L1 -368 5512 5361 5 1125 351 60 0 0 chr17 70885340 70885390 -24387261 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 1125 293 259 73 12 chr17 70885419 70885501 -24387150 - B4A SINE B4 -4 288 202 5 1125 1194 251 52 25 chr17 70885505 70885868 -24386783 - MTE2b LTR MaLR -5 374 2 5 1125 373 318 94 50 chr17 70885868 70886067 -24386584 - B4A SINE B4 -84 208 1 5 1125 242 279 0 0 chr17 70886073 70886141 -24386510 - L1M2 LINE L1 -907 5390 5323 5 1125 429 70 0 0 chr17 70886141 70886198 -24386453 + (CTTG)n Simple_repeat Simple_repeat 2 58 0 5 1125 228 261 34 11 chr17 70886198 70886218 -24386433 - L1P5 LINE L1 -834 5322 5301 5 1125 323 304 68 68 chr17 70886303 70886508 -24386143 - L1M2 LINE L1 -963 5180 4976 5 1125 2014 285 104 80 chr17 70886572 70886777 -24385874 - L1M2 LINE L1 -1454 4689 4475 5 1125 222 37 0 0 chr17 70886777 70886804 -24385847 + (TTG)n Simple_repeat Simple_repeat 1 27 0 5 1125 2014 285 104 80 chr17 70886804 70887052 -24385599 - L1M2 LINE L1 -1669 4474 4240 5 1125 2611 47 0 21 chr17 70887052 70887378 -24385273 + L1_Mus1 LINE L1 6248 6566 -1 5 1125 2014 285 104 80 chr17 70887378 70888485 -24384166 - L1M2 LINE L1 -1904 4239 3091 5 1125 683 24 0 0 chr17 70888541 70888626 -24384025 + L1Md_A LINE L1 6498 6582 0 5 1125 231 254 17 0 chr17 70888854 70888913 -24383738 - L1_Rod LINE L1 -3113 2764 2705 5 1125 255 277 89 42 chr17 70888963 70889122 -24383529 - L1_Rod LINE L1 -3151 2726 2591 5 1125 1740 199 108 13 chr17 70890053 70890434 -24382217 - MTC LTR MaLR 0 421 5 5 1125 331 261 234 30 chr17 70890436 70890701 -24381950 - L1M2 LINE L1 -3707 2436 2118 5 1125 1156 121 6 0 chr17 70890887 70891060 -24381591 + B2_Mm2 SINE B2 1 174 -21 5 1125 255 93 0 0 chr17 70891061 70891104 -24381547 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 5 1125 829 270 32 102 chr17 70891160 70891564 -24381087 - MTE2a LTR MaLR 0 379 4 5 1125 1122 95 0 0 chr17 70892013 70892160 -24380491 + B1_Mus2 SINE Alu 1 147 0 5 1125 1185 73 11 11 chr17 70892164 70892343 -24380308 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 5 1125 1003 257 59 116 chr17 70894019 70894407 -24378244 + MTE2a LTR MaLR 1 366 -13 5 1125 587 228 83 12 chr17 70894753 70894922 -24377729 + B3A SINE B2 1 181 -17 5 1125 285 89 0 0 chr17 70894922 70894967 -24377684 + (CAGAGA)n Simple_repeat Simple_repeat 6 50 0 5 1125 8464 65 3 4 chr17 70894993 70896233 -24376418 + L1_Mus3 LINE L1 5401 6638 0 5 1125 1486 239 107 31 chr17 70896367 70897030 -24375621 - L1MA5 LINE L1 -1 6299 5296 5 1125 4270 102 27 18 chr17 70897080 70897710 -24374941 - Lx LINE L1 -7 6647 6012 5 1125 36 0 0 0 chr17 70897946 70897982 -24374669 + AT_rich Low_complexity Low_complexity 1 36 0 5 1125 202 376 96 6 chr17 70898093 70898259 -24374392 + MIR SINE MIR 49 229 -33 5 1125 792 184 20 0 chr17 70898364 70898516 -24374135 + B3 SINE B2 35 189 -27 5 1125 22 0 0 0 chr17 70898516 70898538 -24374113 + AT_rich Low_complexity Low_complexity 1 22 0 5 1125 711 217 15 61 chr17 70898704 70898900 -24373751 + B3A SINE B2 2 188 -10 5 1125 243 0 0 0 chr17 70898983 70899010 -24373641 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 1125 772 316 104 6 chr17 70899031 70899369 -24373282 - MLT1D LTR MaLR -134 371 1 5 1125 440 312 75 11 chr17 70900204 70900392 -24372259 + Tigger5 DNA MER2_type 9 208 -2198 5 1125 452 301 19 77 chr17 70900535 70900744 -24371907 + ORR1E LTR MaLR 1 197 -162 5 1125 263 341 91 17 chr17 70901171 70901347 -24371304 + ORR1E LTR MaLR 5 193 -166 5 1125 207 0 0 0 chr17 70902047 70902070 -24370581 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 5 1125 1989 42 0 0 chr17 70903590 70903828 -24368823 + L1_Mus1 LINE L1 6330 6567 0 5 1125 352 159 28 42 chr17 70904421 70904493 -24368158 + Lx8 LINE L1 7047 7117 -356 5 1125 1465 305 70 15 chr17 70904507 70905050 -24367601 - Lx8 LINE L1 -453 7020 6448 5 1125 195 114 0 0 chr17 70905422 70905457 -24367194 + (ATG)n Simple_repeat Simple_repeat 1 35 0 5 1125 588 242 33 7 chr17 70905516 70905650 -24367001 + B3A SINE B2 10 147 -51 5 1125 351 0 0 0 chr17 70905650 70905689 -24366962 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1125 588 242 33 7 chr17 70905689 70905704 -24366947 + B3A SINE B2 148 162 -36 5 1125 264 271 108 17 chr17 70907057 70907177 -24365474 + ID_B1 SINE B4 94 224 0 5 1125 441 212 6 51 chr17 70907633 70907987 -24364664 + CT-rich Low_complexity Low_complexity 1 337 0 5 1125 847 133 201 48 chr17 70908155 70908344 -24364307 - URR1B DNA MER1_type -3 222 5 5 1125 1070 128 0 11 chr17 70908635 70908817 -24363834 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 5 1125 206 294 11 21 chr17 70908853 70908947 -24363704 + CT-rich Low_complexity Low_complexity 3 95 0 5 1125 214 234 0 0 chr17 70909010 70909057 -24363594 + PB1 SINE Alu 18 64 -63 5 1125 426 235 18 18 chr17 70909059 70909228 -24363423 + GA-rich Low_complexity Low_complexity 3 171 0 5 1125 372 284 11 0 chr17 70909255 70909343 -24363308 + PB1D10 SINE Alu 21 109 -8 5 1125 333 0 0 0 chr17 70909343 70909380 -24363271 + (GGGA)n Simple_repeat Simple_repeat 3 39 0 5 140 387 232 252 58 chr17 70909760 70910002 -24362649 - L1MB7 LINE L1 -246 5938 5650 5 1126 315 259 60 43 chr17 70910227 70910344 -24362307 + RMER30 DNA MER1_type 41 159 -43 5 1126 2330 96 5 60 chr17 70912439 70912806 -24359845 + L1_Mus3 LINE L1 6284 6630 -8 5 1126 24 0 0 0 chr17 70912832 70912856 -24359795 + AT_rich Low_complexity Low_complexity 1 24 0 5 1126 324 0 0 0 chr17 70914286 70914322 -24358329 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 5 1126 268 318 12 83 chr17 70914951 70915119 -24357532 + L2b LINE L2 3026 3181 -194 5 1126 751 270 145 47 chr17 70915124 70915462 -24357189 - MTEa LTR MaLR -8 371 1 5 1126 25 0 0 0 chr17 70915795 70915820 -24356831 + AT_rich Low_complexity Low_complexity 1 25 0 5 1126 251 283 0 0 chr17 70916554 70916614 -24356037 + MIR SINE MIR 92 151 -111 5 1126 348 263 31 10 chr17 70916711 70916807 -24355844 + MLT1D LTR MaLR 60 157 -348 5 1126 259 264 28 19 chr17 70916812 70916920 -24355731 + (TA)n Simple_repeat Simple_repeat 2 110 0 5 1126 370 278 211 14 chr17 70916994 70917202 -24355449 + MLT1D LTR MaLR 254 502 -3 5 1126 244 224 14 56 chr17 70917933 70918004 -24354647 + L2c LINE L2 3061 3128 -259 5 1126 2024 126 6 107 chr17 70920833 70921197 -24351454 - ORR1A2 LTR MaLR 0 327 1 5 1126 567 287 39 49 chr17 70921384 70921589 -24351062 - Lx9 LINE L1 -157 7487 7285 5 1126 276 355 9 0 chr17 70921678 70921788 -24350863 + L2a LINE L2 3315 3425 -1 5 1126 262 180 85 92 chr17 70922062 70922215 -24350436 + Lx9 LINE L1 7458 7609 -35 5 1126 25 51 0 0 chr17 70922223 70922262 -24350389 + AT_rich Low_complexity Low_complexity 1 39 0 5 1126 1005 207 24 14 chr17 70922778 70922989 -24349662 + Lx7 LINE L1 7203 7415 -281 5 1126 258 180 0 0 chr17 70923003 70923064 -24349587 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 1126 311 266 0 0 chr17 70923367 70923431 -24349220 - tRNA-Ala-GCG tRNA tRNA -11 64 1 5 1126 447 35 0 0 chr17 70923835 70923892 -24348759 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 1126 188 130 22 0 chr17 70923896 70924023 -24348628 + G-rich Low_complexity Low_complexity 1 129 0 5 1126 706 273 3 104 chr17 70924170 70924468 -24348183 + B4A SINE B4 25 292 0 5 1126 182 345 36 0 chr17 70925623 70925707 -24346944 - L2c LINE L2 -78 3309 3223 5 1126 467 91 0 22 chr17 70927269 70927359 -24345292 + L1_Mus4 LINE L1 6514 6601 -35 5 1126 709 245 0 0 chr17 70927552 70927691 -24344960 - RSINE1 SINE B4 -24 141 3 5 1126 285 225 11 63 chr17 70928105 70928200 -24344451 + Charlie9 DNA MER1_type 4 93 -2664 5 1126 234 0 0 0 chr17 70928200 70928226 -24344425 + (GAGAA)n Simple_repeat Simple_repeat 2 27 0 6 1126 324 0 0 0 chr17 70928377 70928413 -24344238 + (TC)n Simple_repeat Simple_repeat 2 37 0 6 1126 389 325 56 5 chr17 70928652 70928865 -24343786 + L2 LINE L2 2251 2474 -945 6 1126 612 0 0 0 chr17 70928964 70929032 -24343619 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 6 1126 258 196 0 67 chr17 70929052 70929112 -24343539 - Lx8 LINE L1 -1576 5897 5842 6 1126 259 260 290 23 chr17 70929178 70929481 -24343170 + L2 LINE L2 2475 2858 -561 6 1126 678 178 247 29 chr17 70931414 70931588 -24341063 + B3 SINE B2 5 216 0 6 1126 387 0 0 0 chr17 70932715 70932758 -24339893 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1126 23 0 0 0 chr17 70932890 70932913 -24339738 + AT_rich Low_complexity Low_complexity 1 23 0 6 1126 182 329 23 23 chr17 70933082 70933169 -24339482 + MIRb SINE MIR 89 175 -93 6 1126 27 29 0 0 chr17 70934191 70934225 -24338426 + AT_rich Low_complexity Low_complexity 1 34 0 6 1126 218 240 0 20 chr17 70935101 70935152 -24337499 - MIRb SINE MIR -100 168 112 6 1126 321 47 0 0 chr17 70935407 70935450 -24337201 + (TAAAA)n Simple_repeat Simple_repeat 5 47 0 6 1126 239 330 39 0 chr17 70935731 70935834 -24336817 - Cheshire DNA MER1_type -2141 279 173 6 1126 303 96 0 0 chr17 70935837 70935889 -24336762 + (A)n Simple_repeat Simple_repeat 1 52 0 6 1126 510 235 28 35 chr17 70936748 70936889 -24335762 + B1F SINE Alu 5 144 -5 6 1126 1110 286 84 21 chr17 70938859 70939238 -24333413 + Lx8 LINE L1 6383 6785 -688 6 1126 2285 203 52 20 chr17 70939258 70939760 -24332891 - Lx6 LINE L1 0 7460 6943 6 1126 983 301 75 14 chr17 70939753 70940114 -24332537 + Lx8 LINE L1 6827 7209 -264 6 1126 336 167 15 0 chr17 70940401 70940467 -24332184 - Lx7 LINE L1 -15 7681 7615 6 1126 200 219 0 0 chr17 70940477 70940518 -24332133 + CT-rich Low_complexity Low_complexity 2 42 0 6 1126 621 234 0 0 chr17 70941114 70941272 -24331379 + (TA)n Simple_repeat Simple_repeat 2 159 0 6 1126 234 0 0 0 chr17 70943205 70943231 -24329420 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 6 1126 760 167 72 0 chr17 70943319 70943457 -24329194 - B1_Mur1 SINE Alu 0 149 2 6 1126 643 255 65 55 chr17 70945005 70945204 -24327447 + RMER30 DNA MER1_type 2 202 0 6 1126 717 216 0 10 chr17 70946561 70946714 -24325937 + B1_Mur1 SINE Alu 1 148 -2 6 1126 221 57 0 28 chr17 70946722 70946758 -24325893 + (TTA)n Simple_repeat Simple_repeat 3 37 0 6 1126 21 71 0 0 chr17 70946799 70946841 -24325810 + AT_rich Low_complexity Low_complexity 1 42 0 6 1126 832 309 45 25 chr17 70947009 70947367 -24325284 - MTEa LTR MaLR -3 376 12 6 1126 435 200 41 98 chr17 70948697 70948819 -24323832 - B3A SINE B2 -29 187 73 6 1126 1286 83 77 0 chr17 70949269 70949450 -24323201 + B2_Mm2 SINE B2 1 195 0 6 1126 255 369 26 41 chr17 70949464 70949659 -24322992 - MLT1J-int LTR MaLR -965 422 231 6 1126 276 333 53 8 chr17 70950317 70950450 -24322201 + MIR SINE MIR 23 161 -101 6 1126 225 0 0 0 chr17 70951797 70951822 -24320829 + (CTAA)n Simple_repeat Simple_repeat 4 28 0 6 1126 379 359 84 0 chr17 70951876 70952007 -24320644 + RSINE1 SINE B4 14 155 -10 6 1126 8320 41 2 2 chr17 70952036 70953011 -24319640 - L1_Mus1 LINE L1 0 6567 5593 6 1126 1198 142 52 5 chr17 70953853 70954065 -24318586 - RMER4B LTR ERVK -363 222 1 6 1126 479 307 11 57 chr17 70954106 70954282 -24318369 - B4A SINE B4 0 292 125 6 1126 21 0 0 0 chr17 70954883 70954904 -24317747 + AT_rich Low_complexity Low_complexity 1 21 0 6 1126 25 0 0 0 chr17 70955308 70955333 -24317318 + AT_rich Low_complexity Low_complexity 1 25 0 6 1126 504 287 24 37 chr17 70955833 70956015 -24316636 + B3A SINE B2 7 190 -26 6 1126 757 289 98 21 chr17 70956764 70957100 -24315551 - MLT1A LTR MaLR -10 364 3 6 1126 3506 69 0 0 chr17 70958734 70959181 -24313470 - L1Md_A LINE L1 0 6582 6136 6 1126 4365 26 0 0 chr17 70959181 70959881 -24312770 + L1Md_T LINE L1 5396 6095 -487 6 1126 3578 35 7 2 chr17 70960425 70960854 -24311797 + L1Md_F2 LINE L1 5703 6133 -449 6 1126 2313 122 82 6 chr17 70961011 70961375 -24311276 + ORR1B1 LTR MaLR 3 394 0 6 1126 279 68 0 48 chr17 70961396 70961458 -24311193 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 6 1126 457 274 22 9 chr17 70963471 70963519 -24309132 - B4 SINE B4 -92 132 83 6 1126 188 0 0 69 chr17 70963519 70963548 -24309103 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 6 1126 457 232 27 0 chr17 70963548 70963631 -24309020 - B4 SINE B4 -206 86 3 6 1126 360 0 0 0 chr17 70963794 70963834 -24308817 + (TC)n Simple_repeat Simple_repeat 1 40 0 6 1126 279 0 0 0 chr17 70963834 70963864 -24308787 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 1126 390 252 36 9 chr17 70964631 70964743 -24307908 + PB1D7 SINE Alu 1 115 -5 6 1126 237 286 35 12 chr17 70964745 70964830 -24307821 + G-rich Low_complexity Low_complexity 3 89 0 6 1126 318 273 22 11 chr17 70965263 70965441 -24307210 + (TA)n Simple_repeat Simple_repeat 1 180 0 6 1126 625 150 0 15 chr17 70965464 70965599 -24307052 + (TA)n Simple_repeat Simple_repeat 2 134 0 6 1126 218 259 25 58 chr17 70966527 70966643 -24306008 + MIRc SINE MIR 87 194 -68 6 1126 581 287 124 30 chr17 70966853 70967119 -24305532 + B4A SINE B4 2 292 0 6 1126 8751 26 0 2 chr17 70967488 70968924 -24303727 + L1Md_F3 LINE L1 5155 6584 0 6 1126 588 226 9 0 chr17 70968956 70969071 -24303580 - MTD LTR MaLR -299 120 5 6 1126 1070 321 80 94 chr17 70969081 70969539 -24303112 + Lx8 LINE L1 5853 6333 -1140 6 1126 1094 85 0 6 chr17 70969539 70969717 -24302934 + (TAGA)n Simple_repeat Simple_repeat 4 180 0 6 1126 1070 321 80 94 chr17 70969717 70970118 -24302533 + Lx8 LINE L1 6334 6700 -773 6 1126 339 280 0 13 chr17 70970279 70970355 -24302296 + RSINE1 SINE B4 3 77 -88 6 1126 457 294 95 54 chr17 70970735 70971051 -24301600 + MLT1D LTR MaLR 19 347 -158 6 1126 567 252 26 0 chr17 70971435 70971614 -24301037 - ID_B1 SINE B4 -8 216 6 6 1126 235 359 0 0 chr17 70971663 70971769 -24300882 - L1MA9 LINE L1 -38 6274 6169 6 1126 248 307 221 10 chr17 70972251 70972455 -24300196 - L1MA6 LINE L1 -5 6295 6049 6 1126 2020 274 60 34 chr17 70972736 70973470 -24299181 - Lx8 LINE L1 -303 7170 6418 6 1126 254 180 131 65 chr17 70973812 70973919 -24298732 + MLT1D LTR MaLR 18 131 -496 6 1126 183 42 0 0 chr17 70973993 70974017 -24298634 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 1126 599 94 10 0 chr17 70974049 70974145 -24298506 + (TGGA)n Simple_repeat Simple_repeat 4 100 0 6 1126 467 293 85 11 chr17 70974225 70974401 -24298250 + MLT1D LTR MaLR 249 437 -68 6 1126 344 65 0 0 chr17 70974401 70974447 -24298204 - MTD LTR MaLR 0 419 374 6 1126 567 107 0 0 chr17 70974680 70974764 -24297887 + (GA)n Simple_repeat Simple_repeat 1 84 0 6 1126 252 0 0 0 chr17 70975267 70975295 -24297356 + (TC)n Simple_repeat Simple_repeat 2 29 0 6 1126 228 338 90 8 chr17 70975991 70976125 -24296526 + L1M5 LINE L1 5620 5764 -476 6 1126 2344 285 82 56 chr17 70976432 70977291 -24295360 - Lx8 LINE L1 -288 7185 6295 6 1126 3175 68 2 8 chr17 70977291 70977693 -24294958 - MTB LTR MaLR 0 400 1 6 1126 2344 285 82 56 chr17 70977693 70977895 -24294756 - Lx8 LINE L1 -1179 6294 6096 6 1126 579 282 81 59 chr17 70978275 70978546 -24294105 + B4A SINE B4 1 277 -15 6 1126 441 188 38 113 chr17 70979065 70979215 -24293436 + B1_Mur3 SINE Alu 1 136 -13 6 1126 261 0 0 0 chr17 70979984 70980013 -24292638 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 6 1126 987 104 15 0 chr17 70980017 70980151 -24292500 - B1_Mus1 SINE Alu -12 136 1 6 1126 418 303 87 85 chr17 70980416 70980910 -24291741 - L1MC1 LINE L1 -1 6332 5838 6 1126 359 302 47 13 chr17 70981064 70981233 -24291418 + L1MEf LINE L1 1755 1906 -3941 6 1126 295 343 50 10 chr17 70981228 70981428 -24291223 + L1M2 LINE L1 2798 3005 -3138 6 1126 425 238 10 0 chr17 70981500 70981601 -24291050 - Lx9 LINE L1 -603 7041 6940 6 1126 841 242 0 10 chr17 70981603 70981799 -24290852 + Lx9 LINE L1 7079 7272 -372 6 1126 660 213 26 42 chr17 70981816 70982007 -24290644 + Lx9 LINE L1 7331 7518 -126 6 1126 275 104 21 0 chr17 70982168 70982216 -24290435 + (GA)n Simple_repeat Simple_repeat 2 50 0 6 1126 324 158 0 0 chr17 70982327 70982384 -24290267 + GA-rich Low_complexity Low_complexity 1 57 0 6 1126 378 57 0 0 chr17 70982394 70982447 -24290204 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 6 1126 942 189 45 10 chr17 70983503 70983701 -24288950 + MTC LTR MaLR 1 205 -216 6 1126 489 76 0 0 chr17 70983702 70983768 -24288883 + (GGA)n Simple_repeat Simple_repeat 3 68 0 6 1126 1241 167 5 5 chr17 70983768 70983985 -24288666 + MTC LTR MaLR 197 413 -8 6 1126 212 143 24 0 chr17 70984987 70985029 -24287622 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 1126 232 284 89 22 chr17 70985029 70985119 -24287532 + RMER30 DNA MER1_type 107 202 0 6 1126 300 275 94 11 chr17 70985250 70985430 -24287221 - L1MD1 LINE L1 -96 6537 6343 6 1126 378 291 91 12 chr17 70985477 70985701 -24286950 - L1MD1 LINE L1 -510 6225 5977 6 1126 227 278 202 5 chr17 70985730 70985918 -24286733 - L1MD1 LINE L1 -857 5893 5669 6 1126 731 190 0 9 chr17 70986682 70986828 -24285823 + B1_Mur2 SINE Alu 1 143 -6 6 1126 864 145 0 0 chr17 70986828 70986973 -24285678 + (GAAA)n Simple_repeat Simple_repeat 1 145 0 6 1126 817 37 18 0 chr17 70986983 70987092 -24285559 + (GGAGA)n Simple_repeat Simple_repeat 3 113 0 6 1126 743 75 0 9 chr17 70987101 70987209 -24285442 + (GGAA)n Simple_repeat Simple_repeat 4 110 0 6 1126 1380 284 116 14 chr17 70987220 70987938 -24284713 - L1MD1 LINE L1 -1544 4993 4203 6 1126 229 51 51 0 chr17 70988011 70988050 -24284601 + (ATTG)n Simple_repeat Simple_repeat 1 41 0 6 1126 720 274 44 33 chr17 70988083 70988358 -24284293 - L1MD1 LINE L1 -4622 2011 1734 6 1126 2136 124 18 9 chr17 70988597 70988931 -24283720 + Lx3B LINE L1 6636 6972 -1 6 1126 641 299 58 14 chr17 70988976 70989271 -24283380 - L1MD1 LINE L1 -5089 1544 1237 6 1126 474 186 80 0 chr17 70989388 70989501 -24283150 - MTE2b LTR MaLR -14 365 244 6 1126 25 31 0 0 chr17 70990223 70990255 -24282396 + AT_rich Low_complexity Low_complexity 1 32 0 6 1126 260 233 99 11 chr17 70990779 70990870 -24281781 + PB1D7 SINE Alu 5 103 -17 6 1126 206 237 0 0 chr17 70990877 70990915 -24281736 + polypurine Low_complexity Low_complexity 3 40 0 6 1126 1297 258 60 67 chr17 70990964 70991384 -24281267 + MTD LTR MaLR 1 417 -2 6 1126 386 259 36 54 chr17 70991807 70991974 -24280677 - RNLTR23 LTR ERVK 0 642 479 7 1126 808 188 82 16 chr17 70992391 70992575 -24280076 - URR1B DNA MER1_type 0 225 30 7 1126 650 220 16 58 chr17 70992637 70992825 -24279826 + B3A SINE B2 19 198 0 7 1126 975 251 69 20 chr17 70993332 70993681 -24278970 + MTEa LTR MaLR 1 366 -13 7 1126 400 311 87 10 chr17 70994043 70994238 -24278413 + MER2 DNA MER2_type 16 225 -120 7 1126 342 0 0 0 chr17 70994239 70994277 -24278374 + (TG)n Simple_repeat Simple_repeat 1 38 0 7 1126 402 70 42 0 chr17 70994287 70994358 -24278293 + (GA)n Simple_repeat Simple_repeat 2 75 0 7 1126 875 269 127 28 chr17 70994659 70995084 -24277567 + L1MB3 LINE L1 5686 6152 -31 7 1126 1553 40 0 0 chr17 70995302 70995477 -24277174 + B2_Mm1a SINE B2 1 175 -18 7 1126 21 0 0 0 chr17 70995561 70995582 -24277069 + AT_rich Low_complexity Low_complexity 1 21 0 7 1126 550 332 10 0 chr17 70997816 70998024 -24274627 + L1MA4A LINE L1 5709 5918 -385 7 1126 447 19 0 0 chr17 70998133 70998185 -24274466 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 1126 284 284 39 87 chr17 70998426 70998530 -24274121 + PB1D10 SINE Alu 9 107 -10 7 1126 2891 148 231 31 chr17 70998765 70999379 -24273272 - RMER19A LTR ERVK 0 737 1 7 1126 2330 119 32 3 chr17 71000000 71000370 -24272281 - ORR1C2 LTR MaLR -3 381 1 1 1126 394 257 0 68 chr17 71000416 71000479 -24272172 + PB1D10 SINE Alu 1 58 -59 2 1126 3504 122 34 30 chr17 71000479 71001038 -24271613 + RLTR31_Mm LTR ERVK 1 561 0 3 1126 394 257 0 68 chr17 71001038 71001091 -24271560 + PB1D10 SINE Alu 59 109 -8 2 1126 21 57 0 0 chr17 71001093 71001128 -24271523 + AT_rich Low_complexity Low_complexity 1 35 0 4 1126 1158 92 0 0 chr17 71001531 71001805 -24270846 + (GGA)n Simple_repeat Simple_repeat 1 274 0 5 1126 1290 94 0 0 chr17 71001826 71002318 -24270333 + (GGA)n Simple_repeat Simple_repeat 1 492 0 5 1126 1118 122 0 6 chr17 71002324 71002505 -24270146 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 6 1126 2062 256 76 10 chr17 71004064 71004745 -24267906 - Lx8 LINE L1 -267 7206 6481 7 1126 318 287 11 11 chr17 71004746 71004841 -24267810 - B4A SINE B4 -196 96 2 8 1126 302 318 162 9 chr17 71005335 71005446 -24267205 + ID_B1 SINE B4 81 208 -16 9 1126 794 102 127 157 chr17 71005446 71005643 -24267008 - B2_Mm2 SINE B2 -3 192 2 1 1126 1088 109 0 0 chr17 71005675 71005822 -24266829 - B1_Mus1 SINE Alu 0 148 2 1 1126 724 320 136 30 chr17 71005860 71006569 -24266082 + L1MA5 LINE L1 5509 6292 -8 1 1126 776 218 14 0 chr17 71007406 71007553 -24265098 + B1_Mur2 SINE Alu 1 149 0 1 1126 396 0 0 0 chr17 71008043 71008087 -24264564 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 1126 746 208 291 47 chr17 71008289 71008348 -24264303 - RCHARR1 DNA MER1_type -101 873 816 1 1126 1449 60 5 5 chr17 71008348 71008532 -24264119 - B2_Mm1a SINE B2 -8 185 2 1 1126 746 208 291 47 chr17 71008532 71008836 -24263815 - RCHARR1 DNA MER1_type -159 815 421 1 1126 229 219 47 0 chr17 71008875 71008939 -24263712 + (CATA)n Simple_repeat Simple_repeat 1 67 0 1 1126 694 213 33 0 chr17 71009611 71009761 -24262890 + RSINE1 SINE B4 11 165 0 1 1126 219 88 0 0 chr17 71009774 71009808 -24262843 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 1 1126 198 0 0 0 chr17 71010099 71010121 -24262530 + (TGG)n Simple_repeat Simple_repeat 1 22 0 2 1126 351 266 7 114 chr17 71010141 71010181 -24262470 + MT2B LTR ERVL 131 155 -446 2 1126 653 216 8 0 chr17 71010181 71010306 -24262345 + B1_Mur2 SINE Alu 2 127 -22 2 1126 1546 49 0 10 chr17 71010390 71010595 -24262056 - L1Md_F2 LINE L1 0 6582 6380 2 1126 530 272 86 50 chr17 71011075 71011354 -24261297 - B4A SINE B4 -3 289 1 2 1126 2777 32 39 18 chr17 71011368 71011751 -24260900 + MTB LTR MaLR 10 400 0 2 1126 216 0 0 0 chr17 71012431 71012455 -24260196 + (A)n Simple_repeat Simple_repeat 1 24 0 2 1126 30 0 0 0 chr17 71012532 71012562 -24260089 + AT_rich Low_complexity Low_complexity 1 30 0 2 1126 21 36 0 0 chr17 71012980 71013008 -24259643 + AT_rich Low_complexity Low_complexity 1 28 0 2 1126 567 0 0 0 chr17 71013705 71013768 -24258883 + (TC)n Simple_repeat Simple_repeat 1 63 0 2 1126 777 169 14 21 chr17 71016158 71016303 -24256348 + B1_Mur3 SINE Alu 5 148 -1 3 1126 546 265 48 27 chr17 71016414 71016600 -24256051 + L1MA6 LINE L1 5868 6057 -243 3 1126 329 280 54 0 chr17 71017001 71017094 -24255557 + PB1D10 SINE Alu 9 106 -11 3 1126 653 66 11 0 chr17 71017095 71017186 -24255465 + (GGA)n Simple_repeat Simple_repeat 1 92 0 3 1126 502 293 33 33 chr17 71017388 71017600 -24255051 - LTR83 LTR ERVL -32 748 537 3 1126 22 0 0 0 chr17 71017794 71017816 -24254835 + AT_rich Low_complexity Low_complexity 1 22 0 3 1126 1505 239 79 41 chr17 71018235 71018772 -24253879 - RLTR20B3 LTR ERVK 0 528 1 3 1126 249 296 71 10 chr17 71018813 71018912 -24253739 - RMER20A LTR ERVK 0 516 412 3 1126 518 198 21 0 chr17 71019173 71019269 -24253382 + B1_Mur2 SINE Alu 52 149 0 3 1126 220 292 106 62 chr17 71019901 71020014 -24252637 - B1_Mur4 SINE Alu -4 146 29 3 1126 611 276 71 6 chr17 71019918 71020100 -24252551 - ID_B1 SINE B4 -12 212 19 4 1126 733 179 21 0 chr17 71020303 71020586 -24252065 + (TAGA)n Simple_repeat Simple_repeat 1 289 0 4 1126 357 82 0 0 chr17 71021634 71021683 -24250968 + (GGGA)n Simple_repeat Simple_repeat 1 49 0 4 1126 225 318 14 64 chr17 71021689 71021830 -24250821 - L1MD1 LINE L1 -25 6217 6084 4 1126 302 284 14 0 chr17 71021852 71021926 -24250725 - L1MD2 LINE L1 -238 6121 6047 4 1126 803 196 0 7 chr17 71022042 71022336 -24250315 + GA-rich Low_complexity Low_complexity 1 292 0 4 1126 265 239 47 132 chr17 71023061 71023119 -24249532 + B3A SINE B2 97 156 -42 4 1126 333 0 0 0 chr17 71023119 71023156 -24249495 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 1126 265 239 47 132 chr17 71023156 71023203 -24249448 + B3A SINE B2 157 193 -5 4 1126 349 313 40 63 chr17 71024614 71024788 -24247863 - MER2 DNA MER2_type -12 333 164 4 1126 207 279 0 16 chr17 71024884 71024946 -24247705 + (TATG)n Simple_repeat Simple_repeat 3 63 0 4 1126 212 0 0 35 chr17 71025554 71025583 -24247068 + (TTTTG)n Simple_repeat Simple_repeat 1 28 0 5 1126 242 282 71 24 chr17 71026325 71026452 -24246199 - MER2 DNA MER2_type -51 294 162 5 1126 451 292 51 23 chr17 71026594 71026769 -24245882 + B3A SINE B2 3 182 -16 5 1126 1145 76 0 0 chr17 71026987 71027131 -24245520 + B1_Mus1 SINE Alu 5 148 0 5 1126 1190 48 14 0 chr17 71027524 71027669 -24244982 + B1_Mus1 SINE Alu 2 148 0 5 1126 210 105 0 0 chr17 71027670 71027708 -24244943 + (A)n Simple_repeat Simple_repeat 1 38 0 5 1126 485 287 14 7 chr17 71028569 71028713 -24243938 + B1F SINE Alu 5 149 0 5 1126 970 164 15 19 chr17 71028713 71028974 -24243677 + GA-rich Low_complexity Low_complexity 1 259 0 5 1126 354 253 34 11 chr17 71028993 71029081 -24243570 + PB1D7 SINE Alu 3 92 -28 5 1126 411 260 29 0 chr17 71029254 71029358 -24243293 + B3A SINE B2 1 107 -91 5 1126 336 24 0 0 chr17 71029365 71029406 -24243245 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1126 465 103 0 0 chr17 71029752 71029820 -24242831 + (TG)n Simple_repeat Simple_repeat 1 68 0 6 1126 352 271 0 72 chr17 71030046 71030185 -24242466 + MTEb LTR MaLR 248 376 -3 6 1126 393 243 78 0 chr17 71030202 71030305 -24242346 + PB1D10 SINE Alu 1 111 -6 6 1126 232 271 57 0 chr17 71030319 71030389 -24242262 + B4A SINE B4 2 75 -217 6 1126 928 112 0 7 chr17 71030430 71030582 -24242069 + B2_Mm1a SINE B2 37 187 -6 6 1126 225 307 85 47 chr17 71030585 71030691 -24241960 - Tigger7 DNA MER2_type -2380 111 2 6 1126 1435 54 16 26 chr17 71030900 71031090 -24241561 + B2_Mm2 SINE B2 1 188 -7 6 1126 239 346 73 69 chr17 71031137 71031398 -24241253 - ORR1E LTR MaLR -46 313 52 6 1126 229 51 51 0 chr17 71031824 71031863 -24240788 + (CCCCCA)n Simple_repeat Simple_repeat 1 41 0 6 1126 607 290 32 13 chr17 71032300 71032457 -24240194 + RSINE1 SINE B4 2 161 -4 7 1126 414 0 0 0 chr17 71032458 71032504 -24240147 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 7 1126 1716 83 12 12 chr17 71033817 71034074 -24238577 + L1_Mus4 LINE L1 6380 6636 0 7 1126 545 211 55 0 chr17 71035907 71036016 -24236635 + RSINE1 SINE B4 15 129 -36 7 1126 192 40 0 0 chr17 71036026 71036051 -24236600 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 1126 946 233 23 19 chr17 71036070 71036284 -24236367 + B3 SINE B2 1 215 -1 7 1126 225 94 0 0 chr17 71036609 71036641 -24236010 + (A)n Simple_repeat Simple_repeat 1 32 0 7 1126 183 100 0 0 chr17 71036839 71036869 -24235782 + (A)n Simple_repeat Simple_repeat 1 30 0 7 1126 739 265 120 0 chr17 71038355 71038555 -24234096 + ID_B1 SINE B4 1 224 0 7 1126 507 219 123 15 chr17 71038588 71038718 -24233933 + B1_Mur1 SINE Alu 1 144 -5 7 1126 326 42 21 0 chr17 71038947 71038995 -24233656 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 1126 273 273 13 25 chr17 71039024 71039103 -24233548 - ID2 SINE ID -3 80 3 8 1126 1122 108 0 0 chr17 71039146 71039294 -24233357 - B1_Mus1 SINE Alu 0 148 1 8 1126 654 114 0 0 chr17 71039298 71039403 -24233248 - B2_Mm2 SINE B2 -89 106 2 8 1126 511 289 161 21 chr17 71039595 71039697 -24232954 - MLT1D LTR MaLR -49 456 348 8 1126 3748 149 63 30 chr17 71039697 71040428 -24232223 - RMER6A LTR ERVK 0 756 2 8 1126 511 289 161 21 chr17 71040428 71040703 -24231948 - MLT1D LTR MaLR -158 347 26 8 1127 1249 93 16 11 chr17 71041034 71041219 -24231432 + B2_Mm2 SINE B2 1 186 -9 8 1127 691 306 12 31 chr17 71041236 71041492 -24231159 + B4A SINE B4 1 251 -41 8 1127 324 0 0 0 chr17 71041518 71041554 -24231097 + (A)n Simple_repeat Simple_repeat 1 36 0 8 1127 613 125 100 0 chr17 71042104 71042224 -24230427 + RLTR12A LTR ERVK 432 563 -5 8 1127 203 284 65 29 chr17 71042898 71043036 -24229615 - MIR SINE MIR 0 262 120 9 1127 269 174 257 14 chr17 71043057 71043127 -24229524 + B1F SINE Alu 11 97 -52 9 1127 276 30 0 0 chr17 71043136 71043169 -24229482 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 9 1127 258 333 78 9 chr17 71043272 71043387 -24229264 - RSINE1 SINE B4 0 165 43 9 1127 594 200 29 0 chr17 71043457 71043632 -24229019 + (CATA)n Simple_repeat Simple_repeat 1 180 0 9 1127 207 254 0 0 chr17 71043632 71043691 -24228960 + (CA)n Simple_repeat Simple_repeat 1 59 0 9 1127 261 0 0 0 chr17 71043771 71043800 -24228851 + (T)n Simple_repeat Simple_repeat 1 29 0 9 1127 217 309 0 42 chr17 71044346 71044417 -24228234 + ID4_ SINE ID 6 73 -10 9 1127 876 75 0 0 chr17 71044420 71044554 -24228097 + (CA)n Simple_repeat Simple_repeat 2 135 0 9 1127 771 105 0 0 chr17 71044554 71044678 -24227973 + (GA)n Simple_repeat Simple_repeat 1 124 0 9 1127 534 232 14 0 chr17 71044811 71044949 -24227702 - Tigger5 DNA MER2_type -91 2315 2176 1 1127 973 239 9 5 chr17 71045306 71045520 -24227131 + B3 SINE B2 2 216 0 1 1127 1447 67 0 10 chr17 71045539 71045698 -24226953 + B2_Mm1a SINE B2 1 159 -34 1 1127 243 61 0 0 chr17 71045698 71045731 -24226920 + (TTAA)n Simple_repeat Simple_repeat 3 35 0 1 1127 1447 67 0 10 chr17 71045731 71045766 -24226885 + B2_Mm1a SINE B2 160 193 0 1 1127 1272 28 0 0 chr17 71045802 71045946 -24226705 + B1_Mus1 SINE Alu 4 147 -1 1 1127 507 60 0 0 chr17 71045955 71046022 -24226629 + (GAAAA)n Simple_repeat Simple_repeat 3 69 0 1 1127 264 268 11 58 chr17 71046095 71046182 -24226469 + ID4_ SINE ID 1 83 0 1 1127 477 0 0 0 chr17 71046301 71046354 -24226297 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1127 236 265 0 0 chr17 71046379 71046442 -24226209 - B3A SINE B2 -104 91 29 1 1127 1761 16 0 0 chr17 71046442 71046635 -24226016 + B2_Mm1a SINE B2 1 193 0 1 1127 291 156 0 0 chr17 71046646 71046691 -24225960 - B3A SINE B2 -153 45 1 1 1127 4513 34 0 13 chr17 71046833 71047371 -24225280 + L1_Mus1 LINE L1 6037 6567 0 1 1127 510 246 138 0 chr17 71047393 71047523 -24225128 + B1_Mur1 SINE Alu 2 149 0 1 1127 381 242 0 0 chr17 71048737 71048902 -24223749 + (TGG)n Simple_repeat Simple_repeat 1 165 0 1 1127 473 235 31 0 chr17 71049296 71049394 -24223257 + B1F SINE Alu 41 141 -8 1 1127 258 255 20 50 chr17 71050004 71050052 -24222599 + G-rich Low_complexity Low_complexity 1 49 0 1 1127 819 207 122 5 chr17 71050052 71050241 -24222410 + B3 SINE B2 1 211 -5 1 1127 258 255 20 50 chr17 71050241 71050291 -24222360 + G-rich Low_complexity Low_complexity 50 96 0 1 1127 405 186 82 0 chr17 71050415 71050512 -24222139 + B1_Mur3 SINE Alu 5 109 -40 1 1127 338 136 37 12 chr17 71050530 71050612 -24222039 + GA-rich Low_complexity Low_complexity 1 84 0 1 1127 465 82 0 0 chr17 71050680 71050721 -24221930 + (T)n Simple_repeat Simple_repeat 1 41 0 1 1127 1104 57 43 0 chr17 71050721 71050862 -24221789 - B1_Mus2 SINE Alu 0 147 1 1 1127 465 82 0 0 chr17 71050862 71050893 -24221758 + (T)n Simple_repeat Simple_repeat 1 31 0 1 1127 32 26 0 0 chr17 71050924 71050963 -24221688 + AT_rich Low_complexity Low_complexity 1 39 0 1 1127 242 196 141 71 chr17 71051260 71051359 -24221292 + MT2B LTR ERVL 155 260 -341 1 1127 637 146 165 31 chr17 71051278 71051405 -24221246 + B1_Mur1 SINE Alu 6 149 0 1 1127 206 105 26 0 chr17 71051767 71051805 -24220846 + (GGGA)n Simple_repeat Simple_repeat 2 40 0 1 1127 2442 143 7 39 chr17 71051856 71052178 -24220473 - MTC LTR MaLR 0 421 103 1 1127 1307 59 47 6 chr17 71052178 71052348 -24220303 + B2_Mm2 SINE B2 1 177 -18 1 1127 560 14 0 27 chr17 71052353 71052427 -24220224 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 1 1127 2442 143 7 39 chr17 71052427 71052533 -24220118 - MTC LTR MaLR -321 100 1 1 1127 912 156 28 11 chr17 71053204 71053309 -24219342 + B3 SINE B2 8 116 -100 1 1127 3155 63 15 12 chr17 71053309 71053712 -24218939 - MTB_Mm LTR MaLR -1 406 3 1 1127 912 156 28 11 chr17 71053712 71053788 -24218863 + B3 SINE B2 117 191 -25 1 1127 718 104 17 9 chr17 71054044 71054160 -24218491 + B1_Mur2 SINE Alu 33 149 0 1 1127 1034 122 24 0 chr17 71054681 71054934 -24217717 + (TG)n Simple_repeat Simple_repeat 1 258 0 1 1127 432 220 153 83 chr17 71054934 71055078 -24217573 - RSINE1 SINE B4 0 165 12 1 1127 342 227 11 0 chr17 71055140 71055228 -24217423 - BC1_Mm scRNA scRNA -62 90 2 1 1127 225 188 48 98 chr17 71055337 71055428 -24217223 - MIRm SINE MIR -50 158 81 1 1127 414 265 51 36 chr17 71055540 71055677 -24216974 + ID_B1 SINE B4 86 224 0 1 1127 218 186 283 17 chr17 71055721 71055781 -24216870 + B4 SINE B4 8 83 -209 1 1127 480 62 0 0 chr17 71055851 71055915 -24216736 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 1127 334 240 53 0 chr17 71057344 71057419 -24215232 + PB1D9 SINE Alu 41 119 -1 1 1127 1265 232 149 69 chr17 71057431 71057442 -24215209 + RMER5 LTR ERV1 19 30 -504 1 1127 534 31 0 0 chr17 71057442 71057506 -24215145 + (GGGA)n Simple_repeat Simple_repeat 3 66 0 1 1127 1265 232 149 69 chr17 71057506 71057837 -24214814 + RMER5 LTR ERV1 31 396 -138 1 1127 1209 56 0 0 chr17 71057837 71057979 -24214672 + B1_Mus1 SINE Alu 1 142 -6 1 1127 1265 232 149 69 chr17 71057979 71058111 -24214540 + RMER5 LTR ERV1 397 531 -3 1 1127 553 235 6 6 chr17 71058138 71058490 -24214161 + (TG)n Simple_repeat Simple_repeat 1 352 0 1 1127 267 314 248 0 chr17 71059185 71059290 -24213361 - L2a LINE L2 0 3426 3296 1 1127 3453 50 40 0 chr17 71060597 71061020 -24211631 - L1_Mus1 LINE L1 0 6567 6128 1 1127 230 283 82 74 chr17 71061073 71061154 -24211497 - MLT1H-int LTR MaLR -978 431 348 1 1127 255 31 0 0 chr17 71061154 71061186 -24211465 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 1127 230 283 82 74 chr17 71061186 71061226 -24211425 - MLT1H-int LTR MaLR -1062 347 309 1 1127 216 328 0 0 chr17 71061294 71061355 -24211296 + B4 SINE B4 24 84 -208 1 1127 1503 17 0 0 chr17 71061619 71061793 -24210858 + (TCTCCC)n Simple_repeat Simple_repeat 1 174 0 1 1127 231 235 0 73 chr17 71062062 71062117 -24210534 + B4A SINE B4 81 131 -161 1 1127 414 0 0 0 chr17 71062343 71062389 -24210262 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1127 642 275 7 0 chr17 71062596 71062734 -24209917 + ID_B1 SINE B4 86 224 0 1 1127 347 341 45 8 chr17 71063174 71063307 -24209344 + B1F SINE Alu 5 142 -7 1 1127 3471 47 0 0 chr17 71063921 71064328 -24208323 - MTB_Mm LTR MaLR 0 407 1 1 1127 508 310 25 6 chr17 71064713 71064872 -24207779 + RSINE1 SINE B4 2 163 -2 1 1127 1634 32 21 0 chr17 71064915 71065104 -24207547 + B2_Mm1t SINE B2 1 193 0 1 1127 360 252 136 64 chr17 71065472 71065612 -24207039 + MER63D DNA AcHobo 1 150 -911 1 1127 1066 120 58 37 chr17 71065620 71065811 -24206840 + B2_Mm2 SINE B2 1 195 0 1 1127 282 143 0 0 chr17 71065812 71065861 -24206790 + (GAAA)n Simple_repeat Simple_repeat 4 52 0 1 1127 228 270 86 43 chr17 71066662 71066755 -24205896 + B4 SINE B4 48 144 -148 1 1127 243 0 0 0 chr17 71066982 71067009 -24205642 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1127 231 36 0 0 chr17 71067332 71067360 -24205291 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 1 1127 418 300 31 148 chr17 71068010 71068233 -24204418 + ID_B1 SINE B4 27 223 -1 1 1127 330 26 0 0 chr17 71068236 71068275 -24204376 + (GA)n Simple_repeat Simple_repeat 2 40 0 1 1127 523 226 29 0 chr17 71068482 71068584 -24204067 + B1F SINE Alu 30 134 -15 1 1127 267 226 19 0 chr17 71069131 71069184 -24203467 + ID4_ SINE ID 2 55 -28 1 1127 333 188 0 0 chr17 71069184 71069264 -24203387 + (CA)n Simple_repeat Simple_repeat 2 81 0 1 1127 630 282 37 57 chr17 71069457 71069721 -24202930 + B4A SINE B4 2 270 -22 1 1127 324 102 0 0 chr17 71069721 71069770 -24202881 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1127 630 282 37 57 chr17 71069770 71069802 -24202849 + B4A SINE B4 271 292 0 1 1127 277 289 0 12 chr17 71070714 71070798 -24201853 + ID2 SINE ID 1 83 0 1 1127 531 0 0 0 chr17 71070981 71071040 -24201611 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 1127 247 257 53 26 chr17 71071189 71071265 -24201386 + BC1_Mm scRNA scRNA 6 83 -69 1 1127 397 274 68 0 chr17 71071291 71071408 -24201243 + RSINE1 SINE B4 17 141 -24 1 1127 331 352 55 0 chr17 71072213 71072304 -24200347 + B1F2 SINE Alu 3 98 -51 1 1127 37 23 0 0 chr17 71072326 71072370 -24200281 + AT_rich Low_complexity Low_complexity 1 44 0 1 1127 560 207 24 24 chr17 71072507 71072631 -24200020 + RSINE1 SINE B4 42 165 0 1 1127 978 99 31 13 chr17 71072642 71072960 -24199691 + (TAGA)n Simple_repeat Simple_repeat 1 324 0 1 1127 630 219 40 24 chr17 71072997 71073115 -24199536 + B1_Mus1 SINE Alu 14 135 -13 1 1127 297 0 0 0 chr17 71073115 71073148 -24199503 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 1 1127 515 283 108 7 chr17 71073284 71073324 -24199327 + ID_B1 SINE B4 44 97 -127 1 1127 368 242 144 46 chr17 71073324 71073452 -24199199 + B1F SINE Alu 3 129 -20 1 1127 228 314 35 11 chr17 71073679 71073766 -24198885 + PB1D10 SINE Alu 23 111 -6 1 1127 230 194 16 0 chr17 71073774 71073836 -24198815 + GA-rich Low_complexity Low_complexity 2 64 0 1 1127 1223 256 92 16 chr17 71073841 71074158 -24198493 - MTE2b LTR MaLR -37 342 2 1 1127 234 0 0 0 chr17 71074260 71074286 -24198365 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1127 697 239 7 0 chr17 71074301 71074439 -24198212 + RSINE1 SINE B4 2 140 -25 1 1127 210 71 0 0 chr17 71074439 71074467 -24198184 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1127 288 0 0 0 chr17 71074513 71074545 -24198106 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1127 239 325 12 12 chr17 71075718 71075802 -24196849 - ORR1E LTR MaLR -8 371 288 1 1127 259 260 101 46 chr17 71075871 71075980 -24196671 - ORR1E LTR MaLR -178 181 67 1 1127 247 268 50 30 chr17 71076131 71076231 -24196420 + MIRb SINE MIR 117 218 -50 1 1127 210 71 0 0 chr17 71076251 71076279 -24196372 + (CCTA)n Simple_repeat Simple_repeat 1 28 0 1 1127 339 275 0 0 chr17 71076282 71076351 -24196300 - ID4 SINE ID -13 70 2 1 1127 198 0 0 0 chr17 71076472 71076494 -24196157 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1127 1019 194 48 10 chr17 71076559 71076767 -24195884 + B3 SINE B2 1 216 0 1 1127 986 224 23 9 chr17 71076914 71077130 -24195521 - ID_B1 SINE B4 -5 219 1 1 1127 394 322 98 0 chr17 71077176 71077319 -24195332 + RSINE1 SINE B4 9 165 0 1 1127 1646 31 0 20 chr17 71077566 71077763 -24194888 + B2_Mm1a SINE B2 1 193 0 1 1127 380 229 21 63 chr17 71077796 71077931 -24194720 + PB1D10 SINE Alu 23 148 -1 1 1127 670 204 0 0 chr17 71078075 71078188 -24194463 + PB1D9 SINE Alu 1 113 -7 1 1127 242 245 5 2 chr17 71078215 71078277 -24194374 + ID4_ SINE ID 7 69 -14 1 1127 468 0 0 0 chr17 71078281 71078333 -24194318 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1127 1140 271 51 68 chr17 71078388 71078741 -24193910 + Tigger7 DNA MER2_type 1 347 -2144 2 1127 405 102 0 0 chr17 71078816 71078875 -24193776 + (CAT)n Simple_repeat Simple_repeat 3 61 0 2 1127 282 250 26 18 chr17 71078942 71079056 -24193595 + (TAGA)n Simple_repeat Simple_repeat 1 115 0 2 1127 2063 143 38 110 chr17 71079079 71079099 -24193552 + ORR1B1 LTR MaLR 8 27 -367 2 1127 2323 107 3 12 chr17 71079099 71079429 -24193222 + ORR1A2 LTR MaLR 1 327 0 2 1127 2063 143 38 110 chr17 71079429 71079742 -24192909 + ORR1B1 LTR MaLR 28 348 -46 2 1127 1245 48 0 0 chr17 71079742 71079889 -24192762 + B1_Mm SINE Alu 1 147 0 2 1127 2063 143 38 110 chr17 71079889 71079971 -24192680 + ORR1B1 LTR MaLR 349 394 0 2 1127 1134 62 14 0 chr17 71080836 71080981 -24191670 - B1_Mus2 SINE Alu 0 147 1 2 1127 21 0 0 0 chr17 71081030 71081051 -24191600 + GC_rich Low_complexity Low_complexity 1 21 0 2 1127 374 169 11 0 chr17 71081051 71081140 -24191511 + GA-rich Low_complexity Low_complexity 1 90 0 2 1127 546 299 90 0 chr17 71081375 71081542 -24191109 + B3A SINE B2 1 182 -16 2 1127 231 230 0 98 chr17 71081905 71081987 -24190664 + RLTR25A LTR ERVK 496 569 -534 2 1127 395 169 0 0 chr17 71081936 71082001 -24190650 + PB1D9 SINE Alu 47 111 -9 2 1127 23 33 0 0 chr17 71082001 71082031 -24190620 + AT_rich Low_complexity Low_complexity 1 30 0 2 1127 768 181 53 0 chr17 71082031 71082164 -24190487 + B1_Mus2 SINE Alu 1 140 -7 2 1127 189 0 0 0 chr17 71082165 71082186 -24190465 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 2 1127 633 209 75 0 chr17 71082323 71082457 -24190194 + ID_B1 SINE B4 81 224 0 2 1127 375 215 42 93 chr17 71082504 71082622 -24190029 + MT2B LTR ERVL 159 270 -331 2 1127 678 142 0 196 chr17 71082524 71082682 -24189969 + B1_Mur1 SINE Alu 18 145 -5 2 1127 1058 196 5 5 chr17 71082678 71082868 -24189783 + B3 SINE B2 27 216 0 2 1127 21 57 0 0 chr17 71082873 71082908 -24189743 + AT_rich Low_complexity Low_complexity 1 35 0 2 1127 913 161 0 0 chr17 71082930 71083067 -24189584 + B1_Mur4 SINE Alu 1 137 -13 2 1127 726 96 0 0 chr17 71083071 71083175 -24189476 + (GA)n Simple_repeat Simple_repeat 2 105 0 2 1127 1641 52 0 0 chr17 71083318 71083511 -24189140 - B2_Mm1t SINE B2 0 193 1 2 1127 1717 262 41 20 chr17 71083608 71084117 -24188534 - RMER5 LTR ERV1 0 534 15 2 1127 200 153 0 48 chr17 71084271 71084333 -24188318 + T-rich Low_complexity Low_complexity 2 60 0 2 1127 696 158 16 202 chr17 71084334 71084517 -24188134 - B1_Mur1 SINE Alu 0 149 1 2 1127 292 212 22 43 chr17 71084704 71084842 -24187809 + GA-rich Low_complexity Low_complexity 4 138 0 2 1127 2250 152 47 10 chr17 71084961 71085367 -24187284 - MTC LTR MaLR 0 421 1 2 1127 1376 95 0 5 chr17 71085499 71085689 -24186962 + B2_Mm2 SINE B2 3 191 -4 2 1127 1315 7 0 7 chr17 71085700 71085848 -24186803 + B1_Mm SINE Alu 1 147 0 2 1127 441 95 0 0 chr17 71085885 71085948 -24186703 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 1127 862 169 89 18 chr17 71086036 71086205 -24186446 + URR1A DNA MER1_type 46 226 0 2 1127 364 267 43 65 chr17 71086205 71086238 -24186413 - CYRA11_Mm Unknown Y-chromosome -452 165 137 2 1127 237 180 0 0 chr17 71086613 71086663 -24185988 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 1127 366 287 109 0 chr17 71086678 71086779 -24185872 - B1F SINE Alu -36 113 2 2 1127 340 366 72 12 chr17 71086779 71086844 -24185807 - ID_B1 SINE B4 -33 191 16 2 1127 842 206 126 0 chr17 71087186 71087385 -24185266 - URR1B DNA MER1_type -1 224 1 2 1127 213 305 92 31 chr17 71088234 71088257 -24184394 - ID_B1 SINE B4 -119 105 2 2 1127 227 270 107 13 chr17 71088257 71088332 -24184319 - ID4_ SINE ID 0 83 2 2 1127 692 27 315 0 chr17 71088369 71088480 -24184171 + B1_Mus2 SINE Alu 2 147 0 2 1127 249 263 62 50 chr17 71088535 71088615 -24184036 + ID4 SINE ID 2 82 -1 2 1127 1476 63 0 21 chr17 71088982 71089176 -24183475 + B2_Mm2 SINE B2 2 191 -4 2 1127 214 256 0 0 chr17 71089369 71089412 -24183239 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 2 1127 216 0 0 0 chr17 71089458 71089482 -24183169 + (A)n Simple_repeat Simple_repeat 1 24 0 2 1127 189 0 0 0 chr17 71089757 71089778 -24182873 + (TC)n Simple_repeat Simple_repeat 2 22 0 2 1127 225 0 0 0 chr17 71089792 71089817 -24182834 + (TTTTTG)n Simple_repeat Simple_repeat 6 30 0 2 1127 1209 54 0 7 chr17 71089817 71089966 -24182685 - B1_Mus1 SINE Alu 0 148 1 2 1127 637 245 33 106 chr17 71090045 71090164 -24182487 + L1MB4 LINE L1 5909 6016 -164 2 1127 313 148 148 0 chr17 71090164 71090225 -24182426 - ID4_ SINE ID -11 72 3 2 1127 637 245 33 106 chr17 71090225 71090379 -24182272 + L1MB4 LINE L1 6017 6162 -18 2 1127 1227 35 7 0 chr17 71090439 71090584 -24182067 + B1_Mus1 SINE Alu 3 148 0 2 1127 608 268 77 86 chr17 71090593 71090826 -24181825 - RLTR18 LTR ERVK -385 231 1 2 1127 961 264 101 69 chr17 71090953 71091388 -24181263 - RLTR14-int LTR ERV1 -4867 450 2 2 1127 335 272 19 37 chr17 71091404 71091511 -24181140 - RLTR14 LTR ERV1 -15 367 263 2 1127 426 286 83 101 chr17 71091820 71092222 -24180429 - MLT1F LTR MaLR -9 539 116 2 1127 459 0 0 0 chr17 71092237 71092288 -24180363 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1127 183 42 0 0 chr17 71092545 71092569 -24180082 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 1127 644 241 22 0 chr17 71093352 71093489 -24179162 - B1F SINE Alu -9 140 1 2 1127 37 0 0 0 chr17 71093656 71093693 -24178958 + AT_rich Low_complexity Low_complexity 1 37 0 2 1127 223 292 0 0 chr17 71093850 71093898 -24178753 + PB1D10 SINE Alu 5 52 -65 2 1127 271 258 133 133 chr17 71093955 71094098 -24178553 - RSINE1 SINE B4 -12 153 11 2 1127 1092 89 0 14 chr17 71094412 71094548 -24178103 + B1_Mus1 SINE Alu 3 138 -10 2 1127 198 0 0 0 chr17 71094548 71094570 -24178081 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2 1127 1092 89 0 14 chr17 71094570 71094581 -24178070 + B1_Mus1 SINE Alu 139 148 0 2 1127 395 333 134 62 chr17 71095054 71095471 -24177180 - LTR73 LTR ERV1 -124 448 2 2 1127 1145 101 0 40 chr17 71095513 71095676 -24176975 + B2_Mm2 SINE B2 1 159 -36 2 1127 279 0 0 0 chr17 71095676 71095707 -24176944 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 2 1127 1145 101 0 40 chr17 71095707 71095719 -24176932 + B2_Mm2 SINE B2 160 169 -26 2 1127 262 270 43 53 chr17 71096247 71096341 -24176310 - Charlie9 DNA MER1_type -2660 97 5 2 1127 417 54 0 0 chr17 71096553 71096609 -24176042 + (GTTTG)n Simple_repeat Simple_repeat 2 57 0 2 1127 207 0 0 0 chr17 71096626 71096649 -24176002 + (T)n Simple_repeat Simple_repeat 1 23 0 2 1127 288 280 13 0 chr17 71099012 71099087 -24173564 + 4.5SRNA scRNA scRNA 16 91 -3 2 1127 589 177 63 91 chr17 71099093 71099236 -24173415 + B1_Mur1 SINE Alu 11 149 0 2 1127 351 0 0 0 chr17 71099307 71099346 -24173305 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1127 487 85 8 57 chr17 71099346 71099469 -24173182 + (TA)n Simple_repeat Simple_repeat 1 118 0 2 1127 298 182 55 0 chr17 71099743 71099798 -24172853 - PB1D7 SINE Alu -2 118 61 2 1127 636 207 8 0 chr17 71099749 71099870 -24172781 - ID_B1 SINE B4 -8 216 95 2 1127 459 265 35 130 chr17 71101116 71101285 -24171366 + ID_B1 SINE B4 3 155 -69 2 1127 272 289 144 0 chr17 71101221 71101318 -24171333 + PB1D10 SINE Alu 6 116 -1 2 1127 400 272 0 10 chr17 71101351 71101455 -24171196 + ID_B1 SINE B4 102 204 -20 2 1127 234 254 50 135 chr17 71101879 71102020 -24170631 - MER2 DNA MER2_type -90 255 127 2 1127 303 249 26 14 chr17 71101984 71102068 -24170583 - ID4 SINE ID -51 101 12 2 1127 411 73 0 0 chr17 71102069 71102124 -24170527 + (TA)n Simple_repeat Simple_repeat 1 55 0 2 1127 515 198 48 19 chr17 71102155 71102258 -24170393 - B1F2 SINE Alu -34 115 10 2 1127 343 294 9 47 chr17 71102266 71102373 -24170278 - PB1D10 SINE Alu -2 115 13 2 1127 267 167 82 16 chr17 71102374 71102435 -24170216 - MER2 DNA MER2_type -183 162 98 2 1127 1296 182 54 29 chr17 71102436 71102758 -24169893 - RMER10B LTR ERVL -24 374 1 2 1127 201 121 0 0 chr17 71103006 71103039 -24169612 + (A)n Simple_repeat Simple_repeat 1 33 0 2 1127 313 324 20 0 chr17 71103980 71104082 -24168569 - PB1D10 SINE Alu -3 114 11 2 1127 437 196 241 35 chr17 71104223 71104339 -24168312 + B1_Mur2 SINE Alu 10 149 0 2 1127 599 100 21 62 chr17 71105662 71105756 -24166895 - B1_Mur2 SINE Alu -7 142 53 2 1127 574 203 183 0 chr17 71105756 71105909 -24166742 + B3 SINE B2 4 184 -32 2 1127 330 26 0 0 chr17 71106113 71106152 -24166499 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1127 224 208 125 0 chr17 71106159 71106207 -24166444 - PB1D9 SINE Alu -42 78 25 2 1127 714 261 12 6 chr17 71106266 71106428 -24166223 - RSINE1 SINE B4 0 165 3 2 1127 1598 37 21 0 chr17 71106713 71106901 -24165750 + B2_Mm1a SINE B2 2 193 0 2 1127 189 0 0 0 chr17 71106901 71106922 -24165729 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1127 641 60 0 0 chr17 71107231 71107315 -24165336 + B2_Mm2 SINE B2 2 85 -110 2 1127 708 229 161 76 chr17 71107315 71107669 -24164982 - RLTR41 LTR ERV1 0 446 63 2 1127 663 80 10 39 chr17 71107686 71107790 -24164861 + B2_Mm2 SINE B2 77 177 -18 2 1127 540 0 0 0 chr17 71108569 71108629 -24164022 + (GA)n Simple_repeat Simple_repeat 2 61 0 2 1127 1140 112 16 27 chr17 71108800 71108983 -24163668 - B2_Mm1a SINE B2 -11 182 2 2 1127 531 110 0 0 chr17 71109189 71109271 -24163380 + L1_Mus2 LINE L1 6485 6566 0 2 1127 180 0 0 0 chr17 71110284 71110304 -24162347 + (CCCCCA)n Simple_repeat Simple_repeat 4 23 0 2 1127 207 176 0 0 chr17 71110697 71110731 -24161920 + (CCA)n Simple_repeat Simple_repeat 2 35 0 3 1127 360 0 0 0 chr17 71110837 71110877 -24161774 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1127 239 326 42 0 chr17 71110901 71110996 -24161655 + PB1D7 SINE Alu 5 103 -17 3 1127 233 203 66 33 chr17 71111000 71111061 -24161590 + MT2B LTR ERVL 193 255 -346 3 1127 299 224 15 15 chr17 71111009 71111077 -24161574 + PB1D10 SINE Alu 49 116 -1 3 1127 222 91 0 0 chr17 71111156 71111189 -24161462 + (A)n Simple_repeat Simple_repeat 1 33 0 3 1127 195 100 0 0 chr17 71111307 71111337 -24161314 + (G)n Simple_repeat Simple_repeat 1 30 0 3 1127 713 123 19 0 chr17 71111339 71111445 -24161206 - PB1D9 SINE Alu -10 110 3 3 1127 355 299 59 8 chr17 71111530 71111648 -24161003 - RSINE1 SINE B4 -33 132 9 3 1127 187 54 26 26 chr17 71111664 71111702 -24160949 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 3 1127 1264 27 0 7 chr17 71111710 71111857 -24160794 - B1_Mus1 SINE Alu -1 147 2 3 1127 320 275 50 7 chr17 71111889 71112028 -24160623 + RSINE1 SINE B4 4 148 -17 3 1127 228 150 25 0 chr17 71112068 71112108 -24160543 + L1MB4 LINE L1 6004 6044 -136 3 1127 186 133 0 0 chr17 71112302 71112332 -24160319 + (TTTTC)n Simple_repeat Simple_repeat 4 33 0 3 1127 1170 61 0 0 chr17 71112334 71112481 -24160170 - B1_Mus2 SINE Alu 0 147 1 3 1127 539 295 52 47 chr17 71112570 71112762 -24159889 - B3A SINE B2 -5 193 1 3 1127 180 0 0 0 chr17 71112952 71112972 -24159679 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 1127 603 298 0 28 chr17 71112988 71113133 -24159518 - RSINE1 SINE B4 -22 143 3 3 1127 216 0 0 0 chr17 71113133 71113157 -24159494 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1127 1281 27 0 0 chr17 71113157 71113304 -24159347 - B1_Mm SINE Alu 0 147 1 3 1127 809 119 7 36 chr17 71113331 71113470 -24159181 - B1_Mur4 SINE Alu -7 143 9 3 1127 644 279 9 47 chr17 71113470 71113557 -24159094 - ID_B1 SINE B4 0 209 1 3 1127 29 19 0 55 chr17 71113702 71113722 -24158929 + AT_rich Low_complexity Low_complexity 1 20 0 3 1127 1040 130 0 0 chr17 71113722 71113868 -24158783 - B1_Mus1 SINE Alu -1 147 2 3 1127 29 19 0 55 chr17 71113868 71113902 -24158749 + AT_rich Low_complexity Low_complexity 1 32 0 3 1127 417 264 149 6 chr17 71113912 71114080 -24158571 + B3A SINE B2 1 192 -6 3 1127 1096 70 27 14 chr17 71114088 71114234 -24158417 + B1_Mus1 SINE Alu 1 148 0 3 1127 746 172 97 0 chr17 71114279 71114413 -24158238 + B1_Mur3 SINE Alu 3 149 0 3 1127 520 340 79 0 chr17 71114423 71114676 -24157975 + MER2 DNA MER2_type 72 344 -1 3 1127 763 234 43 48 chr17 71114762 71114969 -24157682 + B3 SINE B2 1 206 -10 3 1127 1096 50 42 14 chr17 71115026 71115169 -24157482 + B1_Mm SINE Alu 1 147 0 3 1127 455 213 168 30 chr17 71115879 71116010 -24156641 - B1_Mur1 SINE Alu 0 149 1 3 1127 1224 116 39 0 chr17 71116131 71116312 -24156339 + B2_Mm1a SINE B2 1 188 -5 3 1127 354 281 21 62 chr17 71116751 71116895 -24155756 + L1MCa LINE L1 10 147 -6361 3 1127 1333 90 17 0 chr17 71117129 71117307 -24155344 - B2_Mm2 SINE B2 -14 181 1 3 1127 365 278 15 80 chr17 71117419 71117556 -24155095 + L1MCa LINE L1 554 681 -5827 3 1127 318 284 14 0 chr17 71117724 71117798 -24154853 + RSINE1 SINE B4 78 152 -13 3 1127 314 257 0 169 chr17 71117826 71117962 -24154689 + MT2B2 LTR ERVL 152 264 -320 3 1127 352 279 18 120 chr17 71117840 71117857 -24154794 + B4A SINE B4 84 142 -150 3 1127 844 150 8 0 chr17 71117857 71117984 -24154667 + B1_Mur3 SINE Alu 9 136 -13 3 1127 352 279 18 120 chr17 71117984 71118007 -24154644 + B4A SINE B4 143 233 -59 3 1127 1616 32 21 0 chr17 71118402 71118588 -24154063 + B2_Mm1t SINE B2 1 190 -3 3 1127 831 195 80 80 chr17 71118631 71118843 -24153808 + B3 SINE B2 2 213 -3 3 1127 262 372 101 20 chr17 71118946 71119094 -24153557 + RSINE1 SINE B4 3 162 -3 3 1127 528 269 23 117 chr17 71119959 71120158 -24152493 - B3A SINE B2 -4 194 12 3 1127 3180 42 40 0 chr17 71120202 71120582 -24152069 + MTA_Mm LTR MaLR 1 395 -1 3 1127 804 111 103 0 chr17 71120582 71120708 -24151943 + B1_Mus1 SINE Alu 1 139 -9 3 1127 455 87 14 0 chr17 71120708 71120777 -24151874 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 3 1127 507 206 22 0 chr17 71120788 71120880 -24151771 + PB1D9 SINE Alu 26 119 -1 3 1127 1039 194 4 75 chr17 71122349 71122577 -24150074 + B3 SINE B2 2 213 -3 3 1127 271 207 172 0 chr17 71122625 71122683 -24149968 + RSINE1 SINE B4 9 76 -89 3 1127 23 33 0 0 chr17 71122740 71122770 -24149881 + AT_rich Low_complexity Low_complexity 1 30 0 3 1127 478 224 32 57 chr17 71122783 71122906 -24149745 + B1_Mur2 SINE Alu 22 141 -8 3 1127 265 284 16 101 chr17 71122790 71122919 -24149732 + ID_B1 SINE B4 107 224 0 3 1127 686 241 97 56 chr17 71122947 71123342 -24149309 - L1M4 LINE L1 -679 5495 5080 3 1127 1347 62 11 0 chr17 71123378 71123556 -24149095 + B2_Mm1t SINE B2 14 193 0 3 1127 1038 219 5 5 chr17 71123564 71123748 -24148903 + B3 SINE B2 27 210 -6 3 1127 1278 34 0 0 chr17 71123756 71123902 -24148749 + B1_Mm SINE Alu 2 147 0 3 1127 189 0 0 0 chr17 71123902 71123923 -24148728 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 3 1127 1047 71 14 7 chr17 71123924 71124065 -24148586 + B1_Mus2 SINE Alu 2 143 -4 3 1127 207 0 0 0 chr17 71124066 71124089 -24148562 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3 1127 910 155 13 7 chr17 71124095 71124244 -24148407 - B1_Mur4 SINE Alu 0 150 1 3 1127 362 299 35 52 chr17 71124260 71124433 -24148218 - L1M4 LINE L1 -1053 5093 4924 3 1127 23 0 0 0 chr17 71124450 71124473 -24148178 + AT_rich Low_complexity Low_complexity 1 23 0 3 1127 711 242 94 10 chr17 71124489 71124681 -24147970 + B3 SINE B2 9 216 0 3 1127 21 36 0 0 chr17 71124687 71124715 -24147936 + AT_rich Low_complexity Low_complexity 1 28 0 3 1127 413 271 52 0 chr17 71124743 71124839 -24147812 - B1_Mus1 SINE Alu -12 136 36 3 1127 279 263 77 26 chr17 71124772 71124850 -24147801 - MT2B LTR ERVL -345 256 175 3 1127 446 330 82 44 chr17 71124850 71125006 -24147645 - L1M4 LINE L1 -2292 3854 3687 3 1127 213 39 0 0 chr17 71125006 71125032 -24147619 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 1127 446 326 80 36 chr17 71125032 71125167 -24147484 - L1M4 LINE L1 -2460 3686 3543 3 1127 2330 153 88 32 chr17 71125169 71125668 -24146983 - RLTR11A2 LTR ERVK 0 527 1 3 1127 439 331 6 96 chr17 71125704 71125861 -24146790 - B1F2 SINE Alu -3 146 4 3 1127 492 18 0 0 chr17 71125864 71125921 -24146730 + (TC)n Simple_repeat Simple_repeat 2 58 0 3 1127 413 298 83 55 chr17 71126008 71126189 -24146462 - MTE-int LTR MaLR -300 1280 1095 3 1127 1224 55 0 0 chr17 71126253 71126399 -24146252 + B1_Mus2 SINE Alu 2 147 0 3 1127 1712 81 194 21 chr17 71126492 71126771 -24145880 - ORR1A2 LTR MaLR 0 327 1 3 1127 288 0 0 0 chr17 71126802 71126834 -24145817 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 3 1127 337 158 0 40 chr17 71126849 71126916 -24145735 - B2_Mm2 SINE B2 -107 109 47 3 1127 1183 114 17 17 chr17 71126978 71127156 -24145495 - B2_Mm1t SINE B2 -14 179 2 3 1127 303 321 0 12 chr17 71127211 71127293 -24145358 - MTE-int LTR MaLR -950 630 550 3 1127 357 211 190 17 chr17 71127296 71127412 -24145239 - B1F SINE Alu 0 149 14 3 1127 917 298 45 16 chr17 71127412 71127690 -24144961 - MTE-int LTR MaLR -1341 394 53 3 1127 1449 65 21 0 chr17 71127691 71127877 -24144774 + B2_Mm1t SINE B2 1 190 -3 3 1127 251 273 15 29 chr17 71127905 71127973 -24144678 - MTE-int LTR MaLR -1513 67 1 3 1127 1404 75 27 0 chr17 71127973 71128160 -24144491 - B2_Mm1t SINE B2 -1 192 1 3 1127 234 26 0 0 chr17 71128164 71128202 -24144449 - B2_Mm1t SINE B2 -8 185 148 3 1127 241 342 85 44 chr17 71128241 71128489 -24144162 - ORR1E LTR MaLR -11 348 91 3 1127 289 250 37 12 chr17 71129440 71129543 -24143108 + CT-rich Low_complexity Low_complexity 1 105 0 3 1127 268 284 54 0 chr17 71129642 71129716 -24142935 + B3 SINE B2 1 78 -138 3 1127 24 0 0 0 chr17 71130043 71130067 -24142584 + GC_rich Low_complexity Low_complexity 1 24 0 3 1127 275 0 0 28 chr17 71130243 71130279 -24142372 + (CACAC)n Simple_repeat Simple_repeat 1 35 0 3 1127 228 35 0 0 chr17 71131648 71131677 -24140974 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1127 684 165 0 0 chr17 71131677 71131786 -24140865 - B1_Mur2 SINE Alu -11 138 30 3 1127 225 0 0 0 chr17 71131855 71131880 -24140771 + (TTG)n Simple_repeat Simple_repeat 2 26 0 3 1127 752 216 7 0 chr17 71131887 71132026 -24140625 - B1_Mus1 SINE Alu -3 145 6 3 1127 333 250 59 82 chr17 71131922 71132057 -24140594 - MT2B LTR ERVL -336 265 134 3 1127 234 0 0 0 chr17 71132099 71132125 -24140526 + (TTTC)n Simple_repeat Simple_repeat 4 29 0 3 1127 1134 69 14 0 chr17 71132127 71132271 -24140380 - B1_Mm SINE Alu -1 146 1 3 1127 231 36 0 0 chr17 71132272 71132300 -24140351 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 3 1127 1485 51 6 0 chr17 71132300 71132478 -24140173 - B2_Mm1a SINE B2 -14 179 1 3 1127 2096 161 66 75 chr17 71132523 71132587 -24140064 - RLTR19 LTR ERVK -5 494 430 3 1127 498 61 0 0 chr17 71132587 71132653 -24139998 + (CA)n Simple_repeat Simple_repeat 1 66 0 3 1127 2096 161 66 75 chr17 71132653 71133026 -24139625 - RLTR19 LTR ERVK -70 429 61 3 1127 861 207 114 0 chr17 71133306 71133463 -24139188 + B3 SINE B2 1 177 -39 3 1127 200 111 28 0 chr17 71133463 71133499 -24139152 + (CATA)n Simple_repeat Simple_repeat 4 40 0 3 1127 861 207 114 0 chr17 71133499 71133534 -24139117 + B3 SINE B2 178 214 -2 3 1127 1134 65 0 0 chr17 71133569 71133707 -24138944 - B1_Mus1 SINE Alu -9 139 2 3 1127 841 199 16 22 chr17 71133718 71133903 -24138748 - B2_Mm2 SINE B2 -10 185 2 3 1127 1148 65 0 0 chr17 71133927 71134065 -24138586 + B1_Mus1 SINE Alu 1 138 -10 3 1127 302 0 26 0 chr17 71134065 71134103 -24138548 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1127 614 254 215 10 chr17 71134104 71134299 -24138352 + B4A SINE B4 32 266 -26 4 1127 1493 147 4 0 chr17 71134301 71134526 -24138125 - URR1A DNA MER1_type 0 226 1 4 1127 282 56 0 0 chr17 71134582 71134618 -24138033 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1127 879 167 0 0 chr17 71134751 71134889 -24137762 + B1_Mur3 SINE Alu 6 143 -6 4 1127 567 202 0 0 chr17 71134951 71135050 -24137601 + B1_Mus2 SINE Alu 49 147 0 4 1127 1240 48 0 7 chr17 71135054 71135202 -24137449 + B1_Mm SINE Alu 1 147 0 4 1127 208 0 30 30 chr17 71135202 71135235 -24137416 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 4 1127 1658 21 11 0 chr17 71135764 71135954 -24136697 + B2_Mm1a SINE B2 2 193 0 4 1127 468 0 0 0 chr17 71136736 71136788 -24135863 + (GAAA)n Simple_repeat Simple_repeat 2 53 0 4 1127 2005 128 37 40 chr17 71136928 71137238 -24135413 - MTC LTR MaLR 0 421 108 4 1127 3286 53 10 2 chr17 71137238 71137631 -24135020 + MTA_Mm LTR MaLR 1 396 0 4 1127 2005 128 37 40 chr17 71137631 71137670 -24134981 - MTC LTR MaLR -314 107 73 4 1127 302 154 0 19 chr17 71137636 71137689 -24134962 + MTB LTR MaLR 349 400 0 4 1127 625 164 0 9 chr17 71137692 71137797 -24134854 - MTC LTR MaLR -317 104 1 4 1127 1361 244 62 43 chr17 71137808 71138180 -24134471 - MTE2a LTR MaLR 0 379 1 4 1127 429 248 120 0 chr17 71138314 71138431 -24134220 - ID_B1 SINE B4 0 224 94 4 1127 332 265 45 134 chr17 71138431 71138471 -24134180 - B1F SINE Alu 0 149 7 4 1127 744 182 7 45 chr17 71138490 71138645 -24134006 - B1_Mur1 SINE Alu 0 149 1 4 1127 777 232 107 32 chr17 71138670 71138857 -24133794 - B3 SINE B2 -1 215 15 4 1127 521 235 108 8 chr17 71139041 71139161 -24133490 + ID_B1 SINE B4 81 212 -12 4 1127 189 0 0 0 chr17 71139168 71139189 -24133462 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 4 1127 521 259 162 0 chr17 71139363 71139548 -24133103 - ID_B1 SINE B4 -2 222 8 4 1127 1155 8 8 0 chr17 71139915 71140049 -24132602 - B2_Mm2 SINE B2 -60 135 1 4 1127 510 187 8 8 chr17 71140049 71140173 -24132478 + Lx9 LINE L1 7514 7637 -7 4 1127 218 261 0 0 chr17 71140178 71140224 -24132427 + GA-rich Low_complexity Low_complexity 3 48 0 4 1127 708 84 0 0 chr17 71140403 71140498 -24132153 - B1_Mur4 SINE Alu -28 122 28 4 1127 1071 203 19 9 chr17 71140601 71140815 -24131836 - B3 SINE B2 0 216 1 4 1127 1591 36 0 20 chr17 71141626 71141822 -24130829 - B2_Mm1a SINE B2 0 193 2 4 1127 397 276 8 8 chr17 71142207 71142335 -24130316 + (TTAGGG)n Simple_repeat Simple_repeat 4 131 0 4 1127 803 154 15 0 chr17 71142345 71142481 -24130170 - B1_Mus2 SINE Alu -1 146 9 4 1127 554 227 0 94 chr17 71142350 71142520 -24130131 - ID_B1 SINE B4 -6 218 65 4 1127 1645 32 0 0 chr17 71142520 71142706 -24129945 + B2_Mm1a SINE B2 2 187 -6 4 1127 465 287 9 0 chr17 71142799 71142914 -24129737 + RSINE1 SINE B4 14 129 -36 4 1127 260 232 56 28 chr17 71142922 71142993 -24129658 + ID4 SINE ID 5 77 -6 4 1127 238 204 37 0 chr17 71143084 71143138 -24129513 + GA-rich Low_complexity Low_complexity 6 61 0 4 1127 1149 60 53 0 chr17 71143160 71143310 -24129341 + B2_Mm2 SINE B2 1 158 -37 4 1127 623 185 67 0 chr17 71144879 71144998 -24127653 - B1_Mur3 SINE Alu -22 127 1 4 1127 451 211 61 31 chr17 71144998 71145094 -24127557 - MER21B LTR ERV1 -130 733 635 4 1127 441 81 0 0 chr17 71145116 71145178 -24127473 + (CA)n Simple_repeat Simple_repeat 2 63 0 4 1127 418 299 110 28 chr17 71145227 71145409 -24127242 + B3A SINE B2 1 197 -1 4 1127 345 256 102 23 chr17 71145450 71145538 -24127113 - MER21B LTR ERV1 -306 557 463 4 1127 595 266 75 43 chr17 71145556 71145835 -24126816 + B4 SINE B4 5 292 0 4 1127 815 184 35 0 chr17 71145857 71145998 -24126653 - B1_Mur4 SINE Alu 0 150 5 4 1127 265 263 26 0 chr17 71146139 71146215 -24126436 + (CATA)n Simple_repeat Simple_repeat 2 79 0 4 1127 480 280 27 34 chr17 71146304 71146452 -24126199 - RSINE1 SINE B4 -18 147 1 4 1127 363 240 26 88 chr17 71146468 71146582 -24126069 - PB1D7 SINE Alu -13 107 1 4 1127 1460 73 16 0 chr17 71146604 71146795 -24125856 - B2_Mm2 SINE B2 0 195 2 4 1127 217 305 54 54 chr17 71146937 71146957 -24125694 - B4 SINE B4 -88 204 94 4 1127 356 264 33 0 chr17 71146957 71147048 -24125603 - PB1 SINE Alu -25 102 9 4 1127 293 294 20 0 chr17 71147085 71147187 -24125464 + ID_B1 SINE B4 2 105 -119 4 1127 786 230 76 5 chr17 71147234 71147431 -24125220 + B3 SINE B2 1 211 -5 4 1127 253 235 0 0 chr17 71147474 71147525 -24125126 + ID4_ SINE ID 32 82 -1 4 1127 317 250 96 84 chr17 71147840 71148006 -24124645 - RLTR13C2 LTR ERVK 0 808 641 4 1127 236 306 29 39 chr17 71148634 71148736 -24123915 - RLTR13C2 LTR ERVK -1013 101 1 4 1127 1158 110 58 34 chr17 71148827 71149034 -24123617 - MTB_Mm LTR MaLR -195 212 1 4 1127 6934 98 31 57 chr17 71149034 71150161 -24122490 - MTB_Mm-int LTR MaLR 0 1098 1 4 1127 2886 72 48 15 chr17 71150161 71150555 -24122096 - MTB_Mm LTR MaLR 0 407 1 4 1127 778 259 23 6 chr17 71150598 71150773 -24121878 + ID_B1 SINE B4 2 179 -45 4 1127 646 180 48 94 chr17 71150829 71151003 -24121648 + B1_Mur1 SINE Alu 1 148 0 4 1127 576 111 0 0 chr17 71151008 71151098 -24121553 + (GGAA)n Simple_repeat Simple_repeat 3 92 0 4 1127 213 167 0 0 chr17 71151897 71151933 -24120718 - PB1 SINE Alu -2 125 90 4 1127 386 309 32 19 chr17 71151986 71152019 -24120632 + L1MB1 LINE L1 5795 5829 -339 4 1127 1221 140 5 25 chr17 71152019 71152217 -24120434 + B2_Mm2 SINE B2 2 195 0 4 1127 386 309 32 19 chr17 71152217 71152338 -24120313 + L1MB1 LINE L1 5830 5951 -217 4 1127 415 302 67 0 chr17 71152339 71152458 -24120193 + PB1 SINE Alu 1 127 0 4 1127 749 177 56 7 chr17 71152543 71152685 -24119966 + B1_Mur2 SINE Alu 1 149 0 4 1127 359 127 0 16 chr17 71152688 71152752 -24119899 + (GGAA)n Simple_repeat Simple_repeat 1 63 0 4 1127 962 152 0 11 chr17 71152752 71152804 -24119847 + polypurine Low_complexity Low_complexity 3 52 0 4 1127 1196 96 0 6 chr17 71152804 71152982 -24119669 + (GGAA)n Simple_repeat Simple_repeat 2 178 0 4 1127 962 152 0 11 chr17 71152982 71153109 -24119542 + polypurine Low_complexity Low_complexity 53 179 0 4 1127 742 244 28 28 chr17 71153118 71153333 -24119318 + B3 SINE B2 2 216 0 4 1127 1220 54 0 0 chr17 71153355 71153502 -24119149 + B1_Mm SINE Alu 1 147 0 4 1127 502 146 28 0 chr17 71153521 71153614 -24119037 + B2_Mm2 SINE B2 1 108 -85 4 1127 280 224 174 12 chr17 71154112 71154198 -24118453 - B3A SINE B2 -13 185 86 4 1127 417 39 0 0 chr17 71154780 71154831 -24117820 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 1127 1626 160 6 96 chr17 71154918 71154979 -24117672 - ORR1A4 LTR MaLR -8 321 285 4 1127 1603 41 0 0 chr17 71154979 71155174 -24117477 - L1Md_F2 LINE L1 -12 6570 6376 4 1127 1626 160 6 96 chr17 71155174 71155465 -24117186 - ORR1A4 LTR MaLR -45 284 1 4 1127 506 279 11 80 chr17 71155535 71155710 -24116941 + RSINE1 SINE B4 2 164 -1 4 1127 319 320 71 32 chr17 71155923 71156049 -24116602 + L2a LINE L2 3296 3426 0 4 1127 645 14 0 0 chr17 71156267 71156341 -24116310 + (TTTTG)n Simple_repeat Simple_repeat 2 75 0 4 1127 1134 56 14 7 chr17 71156341 71156476 -24116175 - B1_Mus2 SINE Alu -9 138 2 4 1127 1379 79 16 5 chr17 71156601 71156792 -24115859 - B2_Mm2 SINE B2 0 195 3 4 1127 272 330 33 11 chr17 71156837 71156929 -24115722 + B1F2 SINE Alu 27 120 -29 4 1127 677 154 89 8 chr17 71157132 71157256 -24115395 + B1_Mur2 SINE Alu 1 134 -15 4 1127 486 0 0 0 chr17 71159485 71159539 -24113112 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1127 207 0 0 0 chr17 71159683 71159706 -24112945 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 4 1127 1360 38 0 0 chr17 71159706 71159866 -24112785 - B2_Mm1t SINE B2 -33 160 1 4 1127 261 0 0 0 chr17 71159914 71159943 -24112708 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 4 1127 1013 72 105 0 chr17 71159943 71160085 -24112566 - B2_Mm2 SINE B2 -37 158 2 4 1127 674 235 59 0 chr17 71160542 71160695 -24111956 + RSINE1 SINE B4 2 163 -2 4 1127 200 116 70 0 chr17 71160717 71160760 -24111891 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 4 1127 620 145 195 86 chr17 71160799 71160826 -24111825 - B2_Mm2 SINE B2 -1 194 172 4 1127 940 69 115 0 chr17 71160826 71160956 -24111695 + B1_Mus1 SINE Alu 2 146 -2 4 1127 620 145 195 86 chr17 71160956 71161102 -24111549 - B2_Mm2 SINE B2 -24 171 2 4 1127 21 0 0 0 chr17 71161138 71161159 -24111492 + AT_rich Low_complexity Low_complexity 1 21 0 4 1127 23 0 0 0 chr17 71161260 71161283 -24111368 + GC_rich Low_complexity Low_complexity 1 23 0 4 1127 235 270 48 0 chr17 71161847 71161910 -24110741 + MER46C DNA MER2_type 262 327 -11 4 1127 1260 41 0 0 chr17 71162457 71162603 -24110048 + B1_Mus2 SINE Alu 2 147 0 4 1127 261 0 0 0 chr17 71163036 71163065 -24109586 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 1127 392 298 11 0 chr17 71163092 71163186 -24109465 + PB1D10 SINE Alu 1 95 -22 4 1127 624 309 0 30 chr17 71163241 71163408 -24109243 + RSINE1 SINE B4 3 164 -1 4 1127 851 193 0 0 chr17 71163429 71163564 -24109087 - B1_Mur2 SINE Alu -5 144 10 4 1127 1169 75 0 0 chr17 71163613 71163760 -24108891 + B1_Mus1 SINE Alu 2 148 0 4 1127 551 99 35 26 chr17 71164924 71165038 -24107613 + CT-rich Low_complexity Low_complexity 2 116 0 4 1127 210 71 0 0 chr17 71166024 71166052 -24106599 + (TAA)n Simple_repeat Simple_repeat 3 30 0 4 1127 221 171 0 0 chr17 71169064 71169105 -24103546 + A-rich Low_complexity Low_complexity 1 41 0 4 1127 222 164 0 0 chr17 71169125 71169180 -24103471 + A-rich Low_complexity Low_complexity 1 55 0 4 1127 21 0 0 0 chr17 71169921 71169942 -24102709 + AT_rich Low_complexity Low_complexity 1 21 0 4 1127 256 325 78 0 chr17 71171194 71171271 -24101380 + ID4_ SINE ID 1 83 0 5 1127 294 247 0 154 chr17 71171839 71171866 -24100785 + ID_B1 SINE B4 130 222 -2 5 1127 453 181 12 0 chr17 71171866 71171949 -24100702 + PB1D9 SINE Alu 36 119 -1 5 140 1263 109 3 6 chr17 71171949 71172298 -24100353 + (GGA)n Simple_repeat Simple_repeat 1 347 0 5 1128 621 0 0 0 chr17 71172383 71172452 -24100199 + (TTTC)n Simple_repeat Simple_repeat 1 69 0 5 1128 762 294 70 138 chr17 71173340 71173406 -24099245 + MER2 DNA MER2_type 1 70 -275 5 1128 804 240 0 0 chr17 71173406 71173560 -24099091 + RSINE1 SINE B4 2 155 -10 5 1128 762 294 70 138 chr17 71173560 71173633 -24099018 + MER2 DNA MER2_type 71 113 -232 5 1128 1428 80 5 0 chr17 71173633 71173821 -24098830 - B2_Mm1a SINE B2 -3 190 2 5 1128 762 294 70 138 chr17 71173821 71174035 -24098616 + MER2 DNA MER2_type 114 331 -14 5 1128 615 256 130 5 chr17 71174196 71174388 -24098263 + B3 SINE B2 1 216 0 5 1128 1237 112 31 26 chr17 71174500 71174693 -24097958 + B2_Mm2 SINE B2 2 195 0 5 1128 213 121 0 0 chr17 71174694 71174727 -24097924 + (GAAA)n Simple_repeat Simple_repeat 4 36 0 5 1128 423 294 94 87 chr17 71175982 71176269 -24096382 + B4A SINE B4 2 290 -2 5 1128 306 0 0 0 chr17 71176598 71176632 -24096019 + (TC)n Simple_repeat Simple_repeat 1 34 0 5 1128 297 0 0 0 chr17 71176632 71176664 -24095987 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 1128 502 30 0 0 chr17 71176730 71176797 -24095854 + L1_Mus2 LINE L1 6500 6566 0 5 1128 1526 49 0 16 chr17 71177093 71177279 -24095372 + B2_Mm1a SINE B2 1 183 -10 5 1128 1370 85 26 11 chr17 71177347 71177537 -24095114 + B2_Mm2 SINE B2 3 195 0 5 1128 526 255 79 69 chr17 71177783 71177985 -24094666 - RLTR28B LTR ERVL -256 225 22 5 1128 807 159 0 0 chr17 71178271 71178403 -24094248 - B1_Mm SINE Alu -2 145 14 5 1128 306 315 63 0 chr17 71178309 71178420 -24094231 - B4 SINE B4 -94 198 81 5 1128 1100 163 0 31 chr17 71178804 71179000 -24093651 + B2_Mm2 SINE B2 2 191 -4 5 1128 370 301 97 75 chr17 71178979 71179310 -24093341 + MER45B DNA Tip100 502 839 -201 5 1128 225 0 0 0 chr17 71179354 71179379 -24093272 + (CGGGG)n Simple_repeat Simple_repeat 1 25 0 5 1128 284 330 0 0 chr17 71179428 71179525 -24093126 - ID_B1 SINE B4 0 224 128 5 1128 279 216 64 40 chr17 71179605 71179694 -24092957 - PB1 SINE Alu -5 115 16 5 1128 674 299 6 18 chr17 71179748 71179915 -24092736 - RSINE1 SINE B4 0 165 1 5 1128 273 109 0 0 chr17 71180190 71180236 -24092415 + (TTTG)n Simple_repeat Simple_repeat 3 48 0 5 1128 1132 76 7 0 chr17 71180236 71180381 -24092270 - B1_Mus2 SINE Alu 0 147 2 5 1128 228 343 0 15 chr17 71180616 71180684 -24091967 + tRNA-Ala-GCY_ tRNA tRNA 1 67 -8 5 1128 1428 206 106 36 chr17 71181064 71181452 -24091199 + MTD LTR MaLR 3 417 -2 5 1128 438 20 0 0 chr17 71181454 71181505 -24091146 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1128 1164 81 116 0 chr17 71181609 71181782 -24090869 - B2_Mm2 SINE B2 -1 194 2 5 1128 784 131 0 16 chr17 71181794 71181918 -24090733 - B1_Mur2 SINE Alu 0 149 28 5 1128 708 251 43 14 chr17 71182377 71182587 -24090064 - B3 SINE B2 0 216 1 5 1128 238 319 14 0 chr17 71182830 71182902 -24089749 + ID4_ SINE ID 11 83 0 5 1128 217 275 70 70 chr17 71182833 71182962 -24089689 + RSINE1 SINE B4 15 143 -22 5 1128 254 244 75 30 chr17 71183231 71183313 -24089338 + PB1D9 SINE Alu 39 112 -8 5 1128 500 0 0 16 chr17 71183321 71183382 -24089269 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 5 1128 204 97 0 0 chr17 71183383 71183414 -24089237 + (CATA)n Simple_repeat Simple_repeat 1 31 0 5 1128 387 60 0 0 chr17 71183496 71183546 -24089105 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1128 275 67 44 0 chr17 71183569 71183614 -24089037 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 5 1128 225 94 0 0 chr17 71185645 71185677 -24086974 + (T)n Simple_repeat Simple_repeat 1 32 0 5 1128 292 275 142 55 chr17 71185720 71185847 -24086804 - MER47B DNA MER2_type -167 251 114 5 1128 1033 277 185 26 chr17 71186088 71186541 -24086110 - Tigger7 DNA MER2_type -1962 529 5 5 1128 234 0 0 0 chr17 71186719 71186745 -24085906 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 1128 406 245 130 20 chr17 71186871 71187017 -24085634 + RSINE1 SINE B4 3 164 -1 5 1128 672 111 11 60 chr17 71187093 71187275 -24085376 + (CA)n Simple_repeat Simple_repeat 1 173 0 5 1128 182 37 0 36 chr17 71187299 71187327 -24085324 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 1128 330 203 0 15 chr17 71187356 71187421 -24085230 + HAL1-3A_ME LINE L1 1976 2039 -819 5 1128 1483 73 16 0 chr17 71187721 71187913 -24084738 - B2_Mm2 SINE B2 0 195 1 5 1128 868 164 0 54 chr17 71188350 71188498 -24084153 + B1_Mur4 SINE Alu 1 140 -10 5 1128 739 85 39 0 chr17 71188517 71188647 -24084004 + (GGAGA)n Simple_repeat Simple_repeat 4 138 0 5 1128 644 258 88 73 chr17 71188663 71188855 -24083796 + B3 SINE B2 1 195 0 5 1128 330 26 0 0 chr17 71189360 71189399 -24083252 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1128 457 324 118 16 chr17 71189857 71190111 -24082540 + B4A SINE B4 1 280 -12 5 1128 24 0 0 0 chr17 71190208 71190232 -24082419 + AT_rich Low_complexity Low_complexity 1 24 0 5 1128 436 206 66 0 chr17 71190273 71190350 -24082301 + B1F2 SINE Alu 1 78 -42 5 1128 254 279 15 0 chr17 71190350 71190418 -24082233 + ID4 SINE ID 2 70 -13 5 1128 259 78 39 0 chr17 71190426 71190477 -24082174 + (TA)n Simple_repeat Simple_repeat 1 53 0 5 1128 1240 48 0 0 chr17 71190590 71190737 -24081914 + B1_Mus2 SINE Alu 1 147 0 5 1128 216 0 0 0 chr17 71190737 71190761 -24081890 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1128 21 0 0 0 chr17 71190822 71190843 -24081808 + AT_rich Low_complexity Low_complexity 1 21 0 5 1128 293 305 12 0 chr17 71191283 71191365 -24081286 + L1MEf LINE L1 1566 1648 -4552 5 1128 471 35 0 0 chr17 71191365 71191422 -24081229 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1128 605 182 9 0 chr17 71191443 71191553 -24081098 - PB1D9 SINE Alu -8 112 2 5 1128 376 248 103 0 chr17 71191753 71191861 -24080790 + B1_Mur2 SINE Alu 2 120 0 5 1128 234 0 0 0 chr17 71191861 71191887 -24080764 + (A)n Simple_repeat Simple_repeat 1 26 0 5 1128 368 234 274 6 chr17 71192229 71192397 -24080254 - ID_B1 SINE B4 -11 213 1 5 1128 261 0 0 0 chr17 71193436 71193465 -24079186 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1128 23 33 0 0 chr17 71193938 71193968 -24078683 + AT_rich Low_complexity Low_complexity 1 30 0 5 1128 244 278 0 0 chr17 71194723 71194777 -24077874 + ID4_ SINE ID 1 54 -29 5 1128 180 0 0 0 chr17 71199696 71199716 -24072935 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1128 224 235 23 23 chr17 71200575 71200662 -24071989 + (CCCCG)n Simple_repeat Simple_repeat 5 91 0 5 1128 294 73 0 0 chr17 71201622 71201663 -24070988 + (A)n Simple_repeat Simple_repeat 1 41 0 5 1128 297 0 0 0 chr17 71203222 71203255 -24069396 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 1128 294 290 38 82 chr17 71203836 71203994 -24068657 + RMER5 LTR ERV1 16 166 -368 5 1128 577 218 34 34 chr17 71204129 71204276 -24068375 + RMER5 LTR ERV1 388 534 0 5 1128 351 96 0 0 chr17 71204305 71204357 -24068294 + (TTTC)n Simple_repeat Simple_repeat 2 53 0 5 1128 1227 54 0 0 chr17 71204357 71204505 -24068146 - B1_Mus1 SINE Alu 0 148 1 5 1128 1469 64 5 0 chr17 71204914 71205102 -24067549 - B2_Mm1t SINE B2 -4 189 1 5 1128 423 227 138 50 chr17 71205106 71205287 -24067364 - B3A SINE B2 0 198 2 5 1128 504 262 126 58 chr17 71205638 71205812 -24066839 + B3A SINE B2 2 187 -11 5 1128 574 265 29 7 chr17 71206064 71206201 -24066450 - B1F2 SINE Alu -1 148 9 5 1128 344 206 27 0 chr17 71207006 71207079 -24065572 - ID4_ SINE ID -5 78 4 5 1128 1248 34 7 0 chr17 71207106 71207252 -24065399 + B1_Mus2 SINE Alu 1 147 0 5 1128 734 313 0 45 chr17 71207440 71207664 -24064987 - ID_B1 SINE B4 0 224 11 5 1128 289 238 58 23 chr17 71207822 71207908 -24064743 - B3A SINE B2 -108 90 2 5 1128 26 0 0 0 chr17 71207914 71207940 -24064711 + AT_rich Low_complexity Low_complexity 1 26 0 5 1128 462 208 93 9 chr17 71207974 71208081 -24064570 - B3 SINE B2 -98 118 3 5 1128 421 200 114 79 chr17 71208206 71208320 -24064331 - B1F1 SINE Alu -21 128 11 5 1128 417 276 119 30 chr17 71208224 71208392 -24064259 - ID_B1 SINE B4 -30 194 12 5 1128 413 55 0 0 chr17 71208583 71208638 -24064013 + B1_Mus1 SINE Alu 2 56 -92 5 1128 1194 61 0 0 chr17 71208835 71208982 -24063669 - B1_Mus1 SINE Alu 0 148 2 5 1128 327 282 0 0 chr17 71209125 71209196 -24063455 - MTEa LTR MaLR -19 360 290 5 1128 270 0 0 0 chr17 71209232 71209262 -24063389 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 5 1128 361 293 70 102 chr17 71209306 71209591 -24063060 - B4 SINE B4 -15 277 2 5 1128 282 143 0 0 chr17 71209784 71209833 -24062818 + (T)n Simple_repeat Simple_repeat 1 49 0 5 1128 1076 113 0 0 chr17 71209836 71209986 -24062665 - B1_Mur4 SINE Alu 0 150 1 5 1128 234 0 0 0 chr17 71209995 71210021 -24062630 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 5 1128 283 253 38 0 chr17 71210021 71210100 -24062551 - L1MC4 LINE L1 -523 7359 7278 5 1128 373 350 57 48 chr17 71210157 71210367 -24062284 - L1MC4 LINE L1 -880 7162 6951 5 1128 671 206 158 0 chr17 71210501 71210666 -24061985 - B3 SINE B2 -25 191 1 5 1128 318 327 43 12 chr17 71210666 71210827 -24061824 - Lx8 LINE L1 -123 7350 7185 5 1128 392 328 60 64 chr17 71210819 71211070 -24061581 - L1MC4 LINE L1 -1077 6965 6716 5 1128 414 0 0 0 chr17 71211075 71211121 -24061530 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 1128 235 337 59 3 chr17 71211174 71211267 -24061384 + B1F SINE Alu 19 112 -5 6 1128 1460 68 16 0 chr17 71211644 71211834 -24060817 - B2_Mm2 SINE B2 -2 193 1 6 1128 479 247 0 0 chr17 71211996 71212093 -24060558 + ID_B1 SINE B4 127 223 -1 6 1128 36 40 0 0 chr17 71212154 71212204 -24060447 + AT_rich Low_complexity Low_complexity 1 50 0 6 1128 979 105 0 0 chr17 71212495 71212628 -24060023 + B2_Mm1t SINE B2 35 167 -26 6 1128 344 92 355 18 chr17 71212639 71212749 -24059902 + B2_Mm2 SINE B2 47 193 -2 6 1128 682 173 23 103 chr17 71213956 71214130 -24058521 + URR1B DNA MER1_type 56 215 -10 6 1128 570 298 57 130 chr17 71215707 71216008 -24056643 - MER21B LTR ERV1 -583 280 2 6 1128 366 207 0 36 chr17 71216230 71216318 -24056333 + B3A SINE B2 80 162 -54 6 1128 234 0 0 0 chr17 71216318 71216344 -24056307 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 1128 22 56 0 0 chr17 71216344 71216380 -24056271 + AT_rich Low_complexity Low_complexity 1 36 0 6 1128 1479 39 50 0 chr17 71216394 71216576 -24056075 - B2_Mm1t SINE B2 -1 192 2 6 1128 1577 65 60 0 chr17 71216602 71216817 -24055834 - MTB LTR MaLR -1 399 172 6 1128 263 259 16 65 chr17 71216832 71216894 -24055757 + ID4_ SINE ID 2 60 -23 6 1128 254 368 15 0 chr17 71217113 71217181 -24055470 - ID4_ SINE ID 0 83 15 6 1128 783 193 0 13 chr17 71217311 71217463 -24055188 - B1_Mur4 SINE Alu 0 150 1 6 1128 244 193 20 129 chr17 71217634 71217735 -24054916 + RLTR25A LTR ERVK 516 605 -498 6 1128 627 153 0 10 chr17 71217646 71217745 -24054906 + B1_Mur1 SINE Alu 51 148 -1 6 1128 284 234 39 0 chr17 71217764 71217841 -24054810 + L1MC LINE L1 2271 2350 -3796 6 1128 324 305 80 63 chr17 71217841 71218016 -24054635 + MLT1J-int LTR MaLR 157 334 -1053 6 1128 897 166 165 5 chr17 71218118 71218312 -24054339 - URR1B DNA MER1_type 0 225 1 6 1128 312 357 57 52 chr17 71218404 71218596 -24054055 - B3A SINE B2 -5 193 1 6 1128 376 296 62 1 chr17 71218596 71218691 -24053960 - B4A SINE B4 -57 235 128 6 1128 218 214 0 67 chr17 71219123 71219213 -24053438 + C-rich Low_complexity Low_complexity 1 84 0 6 1128 247 333 157 56 chr17 71219800 71220016 -24052635 + MamGypLTR2 LTR Gypsy 11 248 -941 6 1128 234 0 0 0 chr17 71220464 71220490 -24052161 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1128 1114 44 66 0 chr17 71220490 71220627 -24052024 - B1_Mus2 SINE Alu 0 147 2 6 1128 579 256 194 0 chr17 71220788 71220968 -24051683 + B3 SINE B2 1 215 -1 6 1128 413 171 12 17 chr17 71220974 71221078 -24051573 - PB1D9 SINE Alu 0 120 19 6 1128 253 159 185 101 chr17 71222475 71222594 -24050057 + RLTR42-int LTR ERVK 1262 1390 -4132 6 1128 229 338 37 12 chr17 71223181 71223262 -24049389 + RSINE1 SINE B4 12 94 -71 6 1128 581 193 119 0 chr17 71223367 71223476 -24049175 + B1_Mur3 SINE Alu 27 148 -1 6 1128 1260 93 55 0 chr17 71223482 71223665 -24048986 + B2_Mm2 SINE B2 3 195 0 6 1128 563 241 131 12 chr17 71223701 71223869 -24048782 - B3A SINE B2 -10 188 1 6 1128 438 194 41 0 chr17 71223879 71223977 -24048674 - L1MA7 LINE L1 -5 6286 6185 6 1128 381 229 0 0 chr17 71224002 71224107 -24048544 + (TG)n Simple_repeat Simple_repeat 2 106 0 6 1128 1660 177 31 130 chr17 71224282 71224697 -24047954 - ORR1D1 LTR MaLR 0 374 1 6 1128 441 0 0 0 chr17 71224770 71224819 -24047832 + (GA)n Simple_repeat Simple_repeat 1 49 0 6 1128 222 37 0 0 chr17 71225654 71225681 -24046970 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1128 1153 69 14 0 chr17 71225709 71225854 -24046797 - B1_Mus2 SINE Alu 0 147 1 6 1128 769 216 0 0 chr17 71225875 71226014 -24046637 - B1_Mur2 SINE Alu -4 145 7 6 1128 912 147 7 14 chr17 71226144 71226289 -24046362 - B1_Mur1 SINE Alu 0 149 6 6 1128 307 254 51 116 chr17 71226172 71226310 -24046341 - MT2B LTR ERVL -323 278 150 6 1128 1089 281 63 3 chr17 71226354 71226686 -24045965 - Lx8 LINE L1 -159 7314 6963 6 1128 646 37 0 0 chr17 71226695 71226777 -24045874 + RLTR9B2 LTR ERVK 339 420 0 6 1128 510 264 58 100 chr17 71226779 71227019 -24045632 - Lx8 LINE L1 -519 6954 6725 6 1128 322 317 105 47 chr17 71227025 71227197 -24045454 - MER5A DNA MER1_type -3 186 5 6 1128 303 28 0 0 chr17 71227285 71227321 -24045330 + (TTG)n Simple_repeat Simple_repeat 2 37 0 6 1128 514 203 16 0 chr17 71227323 71227451 -24045200 + CT-rich Low_complexity Low_complexity 3 132 0 6 1128 726 180 16 8 chr17 71227454 71227577 -24045074 - B1_Mus1 SINE Alu -19 129 6 6 1128 387 315 102 35 chr17 71227613 71227855 -24044796 - MLT1J LTR MaLR -152 296 73 6 1128 999 246 0 0 chr17 71228293 71228500 -24044151 - B3 SINE B2 -9 207 1 6 1128 207 0 0 0 chr17 71228506 71228529 -24044122 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1128 717 310 40 0 chr17 71228535 71228709 -24043942 - ID_B1 SINE B4 -16 208 28 6 1128 467 230 91 28 chr17 71228857 71229000 -24043651 - RSINE1 SINE B4 -8 157 6 6 1128 455 301 88 88 chr17 71229347 71229425 -24043226 - MER34 LTR ERV1 0 542 460 6 1128 192 40 0 0 chr17 71229425 71229450 -24043201 + (CAA)n Simple_repeat Simple_repeat 1 25 0 6 1128 455 301 88 88 chr17 71229450 71229644 -24043007 - MER34 LTR ERV1 -83 459 270 6 1128 264 263 39 13 chr17 71229673 71229750 -24042901 - MER34 LTR ERV1 -256 286 208 6 1128 583 257 27 48 chr17 71229759 71229906 -24042745 - B1F SINE Alu 0 149 6 6 1128 276 253 20 121 chr17 71229821 71229920 -24042731 - MT2B2 LTR ERVL -335 249 161 6 1128 744 131 40 16 chr17 71230001 71230125 -24042526 - B3 SINE B2 0 216 90 6 1128 624 222 29 22 chr17 71230117 71230255 -24042396 + B1_Mur2 SINE Alu 11 149 0 6 1128 468 146 0 0 chr17 71230257 71230346 -24042305 + (GGGA)n Simple_repeat Simple_repeat 2 90 0 6 1128 1855 186 39 11 chr17 71230382 71230746 -24041905 - ORR1D1 LTR MaLR 0 374 1 6 1128 227 217 41 55 chr17 71230818 71230891 -24041760 - ID2 SINE ID -10 73 2 6 1128 375 260 0 0 chr17 71231040 71231117 -24041534 + ID_B1 SINE B4 148 224 0 6 1128 216 0 0 0 chr17 71231221 71231245 -24041406 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1128 821 249 32 0 chr17 71231780 71231969 -24040682 - B3 SINE B2 -20 196 2 6 1128 748 243 60 0 chr17 71232744 71232929 -24039722 + B3 SINE B2 2 197 -19 6 1128 182 62 0 30 chr17 71233021 71233054 -24039597 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 6 1128 1047 89 0 0 chr17 71233056 71233191 -24039460 - B1_Mus1 SINE Alu -12 136 2 6 1128 258 354 54 16 chr17 71233379 71233508 -24039143 + MIRb SINE MIR 85 218 -50 6 1128 826 239 11 11 chr17 71233644 71233834 -24038817 + B3A SINE B2 2 191 -7 6 1128 1223 48 0 0 chr17 71233969 71234115 -24038536 - B1_Mus2 SINE Alu 0 147 2 6 1128 1471 213 87 32 chr17 71234172 71234516 -24038135 + ORR1D2 LTR MaLR 6 368 -2 6 1128 927 133 145 6 chr17 71234528 71234694 -24037957 - B2_Mm2 SINE B2 -6 189 1 6 1128 446 272 9 37 chr17 71234748 71234855 -24037796 - RSINE1 SINE B4 -60 105 2 6 1128 331 295 47 47 chr17 71235036 71235164 -24037487 - MER2B DNA MER2_type -49 287 160 6 1128 906 222 65 5 chr17 71235220 71235419 -24037232 - B3 SINE B2 -1 215 5 6 1128 981 160 115 16 chr17 71235507 71235698 -24036953 + URR1A DNA MER1_type 17 226 0 6 1128 246 308 103 0 chr17 71235746 71235824 -24036827 - B1F SINE Alu -49 100 15 6 1128 449 201 143 91 chr17 71235843 71236018 -24036633 - B3A SINE B2 -10 185 2 6 1128 310 267 94 83 chr17 71236066 71236246 -24036405 + MTEa LTR MaLR 1 182 -197 6 1128 374 236 62 26 chr17 71236259 71236372 -24036279 + RSINE1 SINE B4 3 119 -46 6 1128 334 340 30 18 chr17 71236735 71236913 -24035738 + MIR SINE MIR 25 205 -63 6 1128 1988 165 67 3 chr17 71237173 71237531 -24035120 - ORR1B1 LTR MaLR -13 381 1 6 1128 682 290 7 0 chr17 71237531 71237676 -24034975 - B3A SINE B2 -51 147 2 6 1128 21 0 0 0 chr17 71237678 71237699 -24034952 + AT_rich Low_complexity Low_complexity 1 21 0 6 1128 282 160 0 0 chr17 71238585 71238635 -24034016 + CT-rich Low_complexity Low_complexity 1 50 0 6 1128 611 278 0 31 chr17 71239156 71239316 -24033335 + RSINE1 SINE B4 11 165 0 6 1128 24 0 0 0 chr17 71239361 71239385 -24033266 + AT_rich Low_complexity Low_complexity 1 24 0 6 1128 291 278 0 2 chr17 71239772 71239844 -24032807 + B1_Mm SINE Alu 58 128 -21 6 1128 1051 86 43 0 chr17 71239873 71240013 -24032638 + B1_Mus1 SINE Alu 1 146 -2 6 1128 514 238 70 64 chr17 71240027 71240184 -24032467 + B3A SINE B2 41 198 0 6 1128 573 274 28 30 chr17 71240193 71240372 -24032279 + B3A SINE B2 4 185 -10 6 1128 436 313 71 0 chr17 71240443 71240641 -24032010 - L1MA9 LINE L1 -225 6087 5876 6 1128 1213 41 0 20 chr17 71240741 71240891 -24031760 + B1_Mus2 SINE Alu 1 147 0 6 1128 200 61 61 0 chr17 71240891 71240924 -24031727 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 6 1128 556 182 0 48 chr17 71241001 71241105 -24031546 - B3 SINE B2 -93 123 25 6 1128 450 284 93 19 chr17 71241184 71241248 -24031403 - ID_B1 SINE B4 -3 221 156 6 1128 511 198 218 18 chr17 71241248 71241413 -24031238 - B3A SINE B2 0 198 1 6 1128 450 284 93 19 chr17 71241413 71241553 -24031098 - ID_B1 SINE B4 -69 155 2 6 1128 347 228 0 114 chr17 71242598 71242712 -24029939 + MLT1K LTR MaLR 383 483 -112 7 1128 354 23 0 0 chr17 71242801 71242844 -24029807 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 1128 402 226 48 154 chr17 71242846 71243034 -24029617 - B3A SINE B2 -30 168 1 7 1128 721 168 8 0 chr17 71243248 71243373 -24029278 + B1_Mur2 SINE Alu 18 143 -6 7 1128 1317 63 11 0 chr17 71243387 71243561 -24029090 + B2_Mm2 SINE B2 4 179 -16 7 1128 238 309 84 76 chr17 71243739 71243774 -24028877 - B4 SINE B4 -88 204 86 7 1128 264 273 84 72 chr17 71243774 71243857 -24028794 - PB1D9 SINE Alu -36 84 1 7 1128 673 240 214 14 chr17 71243857 71244075 -24028576 - ORR1E LTR MaLR -36 323 62 7 1128 451 261 90 69 chr17 71244298 71244640 -24028011 + MLT1G3 LTR MaLR 174 485 -4 7 1128 706 262 37 18 chr17 71244748 71244966 -24027685 - ID_B1 SINE B4 0 224 3 7 1128 1049 214 90 93 chr17 71245274 71245492 -24027159 - ORR1D2 LTR MaLR -1 369 151 7 1128 1432 88 16 0 chr17 71245492 71245684 -24026967 - B2_Mm2 SINE B2 0 195 1 7 1128 1049 214 90 93 chr17 71245684 71245831 -24026820 - ORR1D2 LTR MaLR -220 150 5 7 1128 476 290 67 10 chr17 71246441 71246636 -24026015 - L1MA5 LINE L1 -293 6007 5802 7 1128 283 45 22 22 chr17 71246636 71246682 -24025969 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1128 630 191 179 33 chr17 71247057 71247241 -24025410 + B3 SINE B2 1 211 -5 7 1128 382 320 0 19 chr17 71247310 71247415 -24025236 + PB1D10 SINE Alu 7 109 -8 7 1128 1310 87 11 11 chr17 71247436 71247621 -24025030 - B2_Mm1t SINE B2 -7 186 2 7 1128 322 145 71 95 chr17 71247640 71247724 -24024927 + RLTR25B LTR ERVK 428 509 -519 7 1128 873 37 0 0 chr17 71247652 71247759 -24024892 + B1_Mus1 SINE Alu 34 140 -8 7 1128 1424 80 5 0 chr17 71247795 71247982 -24024669 + B2_Mm1a SINE B2 1 188 -5 7 1128 212 185 36 18 chr17 71247999 71248054 -24024597 + (TA)n Simple_repeat Simple_repeat 1 56 0 7 1128 1245 54 0 0 chr17 71248100 71248247 -24024404 - B1_Mus2 SINE Alu 0 147 1 7 1128 460 268 85 73 chr17 71248268 71248445 -24024206 + ID_B1 SINE B4 1 179 -113 7 1128 2905 43 0 9 chr17 71248513 71248862 -24023789 - ORR1A1 LTR MaLR 0 346 1 7 1128 794 110 118 0 chr17 71249472 71249599 -24023052 - B1_Mur4 SINE Alu -1 149 8 7 1128 791 211 137 0 chr17 71249967 71250142 -24022509 + B3 SINE B2 4 202 -14 7 1128 1057 101 107 0 chr17 71250148 71250317 -24022334 - RLTR9A LTR ERVK -181 187 1 7 1128 24 0 0 0 chr17 71250462 71250486 -24022165 + AT_rich Low_complexity Low_complexity 1 24 0 7 1128 399 261 172 0 chr17 71250496 71250630 -24022021 - RSINE1 SINE B4 -6 159 3 7 1128 419 292 17 50 chr17 71250807 71250926 -24021725 + B1_Mur2 SINE Alu 8 122 -27 7 1128 449 197 11 0 chr17 71250926 71251114 -24021537 + (CA)n Simple_repeat Simple_repeat 1 190 0 7 1128 519 206 0 0 chr17 71251128 71251283 -24021368 + (CA)n Simple_repeat Simple_repeat 1 155 0 7 1128 345 223 147 11 chr17 71251593 71251610 -24021041 - PB1D10 SINE Alu 0 117 10 7 1128 375 244 13 0 chr17 71251610 71251688 -24020963 - ID_B1 SINE B4 -55 169 91 7 1128 322 342 33 0 chr17 71252189 71252309 -24020342 + B1F2 SINE Alu 3 126 -23 7 1128 371 237 266 13 chr17 71252451 71252609 -24020042 + B3A SINE B2 1 198 0 7 1128 390 221 47 0 chr17 71252619 71252705 -24019946 - RMER1C Other Other -9 1333 1244 7 1128 263 243 54 0 chr17 71252732 71252806 -24019845 - B3 SINE B2 -10 206 129 7 1128 445 228 29 10 chr17 71252791 71252893 -24019758 + B1_Mur1 SINE Alu 45 148 -1 7 1128 242 327 46 18 chr17 71252914 71253023 -24019628 + MTD LTR MaLR 264 375 -44 7 1128 191 365 34 25 chr17 71253138 71253256 -24019395 - L2b LINE L2 -3 3372 3254 7 1128 1387 95 16 5 chr17 71253318 71253509 -24019142 + B2_Mm2 SINE B2 2 194 -1 7 1128 22 56 0 0 chr17 71253745 71253781 -24018870 + AT_rich Low_complexity Low_complexity 1 36 0 7 1128 704 261 47 47 chr17 71253784 71253977 -24018674 - B3A SINE B2 -5 193 1 7 1128 464 233 78 20 chr17 71254212 71254365 -24018286 + RMER1A Other Other 116 277 -753 7 1128 979 188 276 0 chr17 71254365 71254615 -24018036 + RMER1A Other Other 81 399 -631 7 1128 276 244 35 170 chr17 71254633 71255004 -24017647 - RMER17C LTR ERVK -68 342 22 7 1128 3152 168 44 52 chr17 71255071 71255577 -24017074 + RMER1A Other Other 395 893 -137 7 1128 1382 49 5 47 chr17 71255577 71255770 -24016881 - B2_Mm1a SINE B2 -8 185 1 7 1128 3152 168 44 52 chr17 71255770 71255899 -24016752 + RMER1A Other Other 894 1025 -5 7 1128 363 309 21 21 chr17 71255895 71256091 -24016560 + L1MB7 LINE L1 3673 3871 -2275 7 1128 262 281 108 8 chr17 71256236 71256365 -24016286 + L1MB7 LINE L1 5801 5942 -242 7 1128 271 145 111 16 chr17 71256564 71256627 -24016024 - MER34A LTR ERV1 -494 77 9 7 1128 1504 0 0 11 chr17 71256708 71256886 -24015765 + (TCTA)n Simple_repeat Simple_repeat 2 177 0 7 1128 824 145 0 8 chr17 71256888 71257020 -24015631 - B1_Mur2 SINE Alu -12 137 7 7 1128 329 249 85 8 chr17 71258014 71258148 -24014503 + PB1D10 SINE Alu 2 148 0 7 1128 293 326 32 32 chr17 71258447 71258542 -24014109 + PB1D7 SINE Alu 17 111 -9 7 1128 198 0 0 0 chr17 71258867 71258889 -24013762 + (CTG)n Simple_repeat Simple_repeat 2 23 0 7 1128 276 293 0 42 chr17 71259108 71259204 -24013447 + MLT1I LTR MaLR 20 111 -300 7 1128 426 285 66 0 chr17 71259423 71259560 -24013091 + MER33 DNA MER1_type 20 165 -159 7 1128 347 231 15 0 chr17 71259568 71259633 -24013018 + tRNA-Ala-GCY_ tRNA tRNA 2 67 -8 7 1128 651 246 56 56 chr17 71259654 71259852 -24012799 + B3A SINE B2 1 198 0 7 1128 686 239 22 0 chr17 71259855 71259993 -24012658 + B1_Mur1 SINE Alu 1 141 -8 7 1128 400 277 57 0 chr17 71260014 71260155 -24012496 + MER33 DNA MER1_type 154 302 -22 7 1128 896 272 41 52 chr17 71260859 71261150 -24011501 - B4 SINE B4 -2 290 3 7 1128 263 49 0 24 chr17 71261559 71261601 -24011050 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 7 1128 1119 63 21 0 chr17 71261601 71261743 -24010908 - B1_Mus1 SINE Alu -2 146 2 7 1128 712 349 47 7 chr17 71261806 71262103 -24010548 - MER2 DNA MER2_type -1 344 36 7 1128 328 154 69 103 chr17 71262532 71262619 -24010032 + RLTR25B LTR ERVK 426 509 -519 7 1128 921 18 0 18 chr17 71262550 71262664 -24009987 + B1_Mus1 SINE Alu 37 148 0 7 1128 353 22 22 0 chr17 71263147 71263193 -24009458 + (TATG)n Simple_repeat Simple_repeat 2 48 0 7 1128 455 279 36 0 chr17 71263214 71263325 -24009326 - B3 SINE B2 -101 115 1 7 1128 1147 86 0 0 chr17 71263564 71263716 -24008935 + B2_Mm2 SINE B2 1 152 -43 7 1128 5899 53 60 3 chr17 71263720 71264482 -24008169 + L1_Mus3 LINE L1 5833 6638 0 7 1128 444 73 0 5 chr17 71264525 71264590 -24008061 + B2_Mm2 SINE B2 47 109 -107 7 1128 225 0 0 0 chr17 71264604 71264629 -24008022 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 7 1128 424 213 209 52 chr17 71264685 71264819 -24007832 + MLT1A1 LTR MaLR 254 408 0 7 1128 296 232 58 39 chr17 71265244 71265347 -24007304 + RCHARR1 DNA MER1_type 780 884 -90 7 1128 237 291 25 0 chr17 71265820 71265899 -24006752 - L1M2 LINE L1 -1902 4241 4161 7 1128 213 299 0 0 chr17 71267084 71267171 -24005480 + (CA)n Simple_repeat Simple_repeat 2 88 0 7 1128 277 179 43 29 chr17 71268462 71268531 -24004120 - MER53 DNA hAT -1 192 123 7 1128 233 250 60 36 chr17 71268517 71268600 -24004051 + MER53 DNA hAT 108 192 -1 7 1128 268 233 40 32 chr17 71268675 71268799 -24003852 + (TATG)n Simple_repeat Simple_repeat 2 126 0 7 1128 187 202 58 8 chr17 71268805 71268925 -24003726 + (TG)n Simple_repeat Simple_repeat 2 127 0 7 1128 298 236 45 18 chr17 71268946 71269058 -24003593 + (TATG)n Simple_repeat Simple_repeat 3 117 0 7 1128 289 192 33 8 chr17 71269076 71269197 -24003454 + (TG)n Simple_repeat Simple_repeat 2 125 0 7 1128 397 318 104 20 chr17 71269429 71269715 -24002936 + RMER1B Other Other 183 737 -605 7 1128 738 281 47 39 chr17 71269722 71269978 -24002673 + RMER1C Other Other 1067 1324 -18 7 1128 424 279 139 61 chr17 71270278 71270572 -24002079 - ORR1E LTR MaLR -2 357 41 7 1128 479 306 33 117 chr17 71271050 71271324 -24001327 - MTEb LTR MaLR -127 252 2 7 1128 453 241 8 51 chr17 71271434 71271552 -24001099 - ID_B1 SINE B4 -1 223 111 7 1128 2123 118 54 31 chr17 71271861 71272212 -24000439 - RLTR15 LTR ERVK 0 359 1 7 1128 711 244 128 0 chr17 71272453 71272625 -24000026 + B3 SINE B2 14 207 -9 7 1128 360 245 11 189 chr17 71272690 71272881 -23999770 + MTE2b LTR MaLR 22 178 -201 7 1128 222 171 0 0 chr17 71273288 71273329 -23999322 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1128 422 125 49 16 chr17 71273465 71273587 -23999064 + (TAGA)n Simple_repeat Simple_repeat 2 127 0 7 1128 1223 41 0 13 chr17 71273698 71273847 -23998804 - B1_Mm SINE Alu 0 147 1 7 1128 188 0 74 0 chr17 71273847 71273874 -23998777 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 7 1128 674 265 15 0 chr17 71273990 71274126 -23998525 + RSINE1 SINE B4 11 148 -17 7 1128 291 330 22 11 chr17 71274488 71274580 -23998071 - MIR3 SINE MIR -7 201 109 7 1128 1253 34 7 0 chr17 71274588 71274734 -23997917 + B1_Mus1 SINE Alu 2 148 0 7 1128 322 310 0 0 chr17 71275080 71275151 -23997500 + B4 SINE B4 82 152 -140 7 1128 564 144 106 0 chr17 71275089 71275193 -23997458 + PB1D9 SINE Alu 6 120 0 7 1128 278 237 194 22 chr17 71275278 71275412 -23997239 - MLT1A1 LTR MaLR -1 407 251 7 1128 324 187 16 8 chr17 71276297 71276421 -23996230 + CT-rich Low_complexity Low_complexity 4 128 0 7 1128 363 44 0 0 chr17 71276427 71276472 -23996179 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 7 1128 448 313 26 0 chr17 71276486 71276601 -23996050 - RSINE1 SINE B4 -18 147 30 8 1128 27 62 0 0 chr17 71276747 71276795 -23995856 + AT_rich Low_complexity Low_complexity 1 48 0 8 1128 857 233 40 0 chr17 71276917 71277119 -23995532 - B3 SINE B2 -6 210 1 8 1128 1400 259 77 95 chr17 71277165 71277712 -23994939 + RMER15 LTR ERVL 3 539 -36 8 1128 635 327 12 6 chr17 71277758 71277921 -23994730 - RSINE1 SINE B4 0 165 2 8 1128 1331 92 0 76 chr17 71277943 71277983 -23994668 + B2_Mm2 SINE B2 1 30 -165 8 1128 1679 36 0 0 chr17 71277983 71278176 -23994475 + B2_Mm1a SINE B2 1 193 0 8 1128 1331 92 0 76 chr17 71278176 71278346 -23994305 + B2_Mm2 SINE B2 31 195 0 8 1128 204 48 23 45 chr17 71278944 71278988 -23993663 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 8 1128 318 291 16 29 chr17 71279626 71279726 -23992925 + PB1D10 SINE Alu 2 99 -50 8 1128 391 206 42 42 chr17 71279918 71280014 -23992637 - B4 SINE B4 -195 97 2 8 1128 209 297 0 59 chr17 71280588 71280656 -23991995 + MER5B DNA MER1_type 45 108 -70 8 1128 475 300 0 0 chr17 71282333 71282433 -23990218 + B3A SINE B2 69 168 -30 8 1128 531 112 0 0 chr17 71282447 71282536 -23990115 + (CA)n Simple_repeat Simple_repeat 1 89 0 8 1128 590 231 46 26 chr17 71283775 71283988 -23988663 + B3A SINE B2 1 214 -2 8 1128 785 275 121 29 chr17 71284121 71284222 -23988429 - ORR1E LTR MaLR -16 343 227 8 1128 282 116 0 0 chr17 71284222 71284265 -23988386 + (CAG)n Simple_repeat Simple_repeat 1 43 0 8 1128 785 275 121 29 chr17 71284265 71284477 -23988174 - ORR1E LTR MaLR -133 226 2 8 1128 246 224 151 12 chr17 71284782 71284868 -23987783 + ORR1D2 LTR MaLR 273 370 0 8 1128 497 262 8 54 chr17 71285069 71285198 -23987453 - MTEa LTR MaLR -256 123 1 8 1128 669 177 14 138 chr17 71285425 71285478 -23987173 - MT2A LTR ERVL -3 530 488 8 1128 1070 80 23 0 chr17 71285478 71285654 -23986997 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 8 1128 669 192 15 144 chr17 71285654 71285836 -23986815 - MT2A LTR ERVL -50 551 347 8 1128 362 288 110 46 chr17 71286269 71286378 -23986273 + ORR1E LTR MaLR 67 182 -177 8 1128 180 0 0 0 chr17 71286378 71286398 -23986253 + (TTTTG)n Simple_repeat Simple_repeat 4 23 0 8 1128 362 288 110 46 chr17 71286398 71286525 -23986126 + ORR1E LTR MaLR 183 317 -42 8 1128 189 121 0 0 chr17 71286673 71286706 -23985945 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1128 253 229 21 0 chr17 71286875 71286923 -23985728 - MLT1G3 LTR MaLR -222 373 325 8 1128 1008 122 68 28 chr17 71287158 71287335 -23985316 - B2_Mm2 SINE B2 -6 189 6 8 1128 333 225 28 0 chr17 71287462 71287533 -23985118 - B3 SINE B2 0 216 144 8 1128 1260 34 0 13 chr17 71287870 71288020 -23984631 + B1_Mus1 SINE Alu 1 148 0 8 1128 246 164 0 0 chr17 71288022 71288077 -23984574 + A-rich Low_complexity Low_complexity 1 55 0 8 1128 1230 25 75 12 chr17 71288081 71288241 -23984410 + B2_Mm2 SINE B2 4 173 -22 8 1128 726 69 0 0 chr17 71288244 71288345 -23984306 + (GGGAA)n Simple_repeat Simple_repeat 4 104 0 8 1128 417 218 218 0 chr17 71288373 71288474 -23984177 + RSINE1 SINE B4 5 127 -38 8 1128 321 82 0 0 chr17 71288530 71288579 -23984072 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 1128 271 342 39 26 chr17 71288795 71288951 -23983700 - L1ME3B LINE L1 -194 6046 5889 8 1128 421 312 10 139 chr17 71288986 71289080 -23983571 - RMER5 LTR ERV1 -62 472 399 8 1128 887 171 7 14 chr17 71289080 71289228 -23983423 - B1_Mur2 SINE Alu 0 149 3 8 1128 421 312 10 139 chr17 71289228 71289334 -23983317 - RMER5 LTR ERV1 -136 398 298 8 1128 336 277 36 0 chr17 71289402 71289485 -23983166 + B1_Mur2 SINE Alu 60 145 -4 8 1128 421 226 113 24 chr17 71289826 71289994 -23982657 - L1MDa LINE L1 -2456 4081 3899 8 1128 740 281 66 45 chr17 71290087 71290691 -23981960 - L1MDa LINE L1 -3750 2787 2160 8 1128 212 71 0 0 chr17 71291282 71291310 -23981341 + PB1 SINE Alu 93 120 -7 8 1128 1294 86 0 6 chr17 71291317 71291331 -23981320 - B2_Mm1a SINE B2 -19 174 161 8 1128 285 51 0 0 chr17 71291331 71291370 -23981281 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 8 1128 1294 86 0 6 chr17 71291370 71291530 -23981121 - B2_Mm1a SINE B2 -33 160 1 8 1128 180 97 0 0 chr17 71291550 71291581 -23981070 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 8 1128 851 96 7 0 chr17 71291629 71291765 -23980886 + (GAAAA)n Simple_repeat Simple_repeat 4 140 0 8 1128 805 243 194 9 chr17 71292468 71292608 -23980043 + MTEa LTR MaLR 1 146 -233 8 1128 522 0 0 0 chr17 71292608 71292666 -23979985 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 8 1128 805 243 194 9 chr17 71292666 71292845 -23979806 + MTEa LTR MaLR 147 379 0 8 1128 396 117 0 0 chr17 71292891 71292968 -23979683 + (TC)n Simple_repeat Simple_repeat 1 77 0 8 1128 489 62 0 0 chr17 71292968 71293033 -23979618 + (TG)n Simple_repeat Simple_repeat 1 65 0 8 1128 511 333 55 40 chr17 71293040 71293312 -23979339 - B4A SINE B4 -12 280 5 8 1128 308 231 154 0 chr17 71293322 71293400 -23979251 - PB1D10 SINE Alu -20 97 8 8 1128 508 285 50 6 chr17 71293435 71293615 -23979036 + B3A SINE B2 5 192 -6 8 1128 262 240 0 138 chr17 71293682 71293798 -23978853 - L1MDa LINE L1 -4668 1965 1866 8 1128 359 221 147 0 chr17 71293820 71293915 -23978736 - PB1D10 SINE Alu -7 110 2 8 1128 283 339 191 58 chr17 71293924 71294462 -23978189 - L1MDa LINE L1 -5440 1193 426 8 1128 276 255 146 109 chr17 71294492 71294712 -23977939 - L1MDa LINE L1 -6297 336 109 8 1128 760 196 163 0 chr17 71294879 71295063 -23977588 + B3 SINE B2 3 216 0 8 1128 295 278 44 0 chr17 71295217 71295307 -23977344 + Tigger5 DNA MER2_type 2239 2332 -74 8 1128 441 0 0 0 chr17 71295415 71295464 -23977187 + (TTA)n Simple_repeat Simple_repeat 3 51 0 8 1128 1181 97 0 0 chr17 71295464 71295619 -23977032 - B2_Mm2 SINE B2 -38 157 3 8 1128 348 294 20 0 chr17 71295619 71295721 -23976930 - PB1D10 SINE Alu -11 106 3 8 1128 1355 208 64 86 chr17 71295799 71296172 -23976479 + MTD LTR MaLR 1 365 -54 8 1128 1940 148 9 44 chr17 71296175 71296514 -23976137 + ORR1C1 LTR MaLR 52 378 0 8 1128 243 161 69 35 chr17 71296514 71296572 -23976079 + MTC LTR MaLR 315 407 -14 8 1128 306 312 42 21 chr17 71296657 71296801 -23975850 + B1F2 SINE Alu 2 148 -1 8 1128 187 157 19 19 chr17 71296888 71296940 -23975711 + GA-rich Low_complexity Low_complexity 1 52 0 8 1128 290 26 0 25 chr17 71297178 71297218 -23975433 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 8 1128 299 268 0 0 chr17 71297225 71297281 -23975370 - ID4 SINE ID -26 57 2 8 1128 816 66 0 0 chr17 71297393 71297499 -23975152 - B1_Mus2 SINE Alu 0 147 42 8 1128 269 168 112 56 chr17 71297436 71297543 -23975108 - RLTR25B LTR ERVK -519 509 397 8 1128 431 34 0 33 chr17 71297575 71297636 -23975015 - PB1D9 SINE Alu -61 59 1 8 1128 806 259 47 9 chr17 71297909 71298123 -23974528 - ID_B1 SINE B4 -2 222 1 8 1128 180 0 0 0 chr17 71298533 71298553 -23974098 + (A)n Simple_repeat Simple_repeat 1 20 0 8 1128 893 253 191 35 chr17 71298922 71299241 -23973410 - MTD LTR MaLR 0 419 51 8 1128 207 114 0 0 chr17 71299750 71299785 -23972866 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 8 1128 804 195 24 30 chr17 71299989 71300158 -23972493 - B2_Mm2 SINE B2 -25 170 3 8 1128 342 309 26 43 chr17 71300364 71300479 -23972172 - ORR1E LTR MaLR -164 195 83 8 1128 422 131 0 0 chr17 71300492 71300553 -23972098 + B1_Mur4 SINE Alu 27 87 -63 8 1128 915 340 36 107 chr17 71300577 71300666 -23971985 - MTE-int LTR MaLR -948 632 550 8 1128 558 262 164 0 chr17 71300666 71300849 -23971802 - B3 SINE B2 -3 213 1 8 1128 915 340 36 107 chr17 71300849 71301421 -23971230 - MTE-int LTR MaLR -1031 549 18 8 1128 25 31 0 0 chr17 71301421 71301453 -23971198 + AT_rich Low_complexity Low_complexity 1 32 0 8 1128 2833 38 0 31 chr17 71301466 71301817 -23970834 - L1_Mus1 LINE L1 0 6567 6228 8 1128 2021 48 68 32 chr17 71301817 71302095 -23970556 + L1_Mus1 LINE L1 5926 6213 -354 8 1128 360 0 0 0 chr17 71302096 71302136 -23970515 + (TTA)n Simple_repeat Simple_repeat 3 42 0 8 1128 1100 128 0 0 chr17 71302136 71302292 -23970359 - B2_Mm2 SINE B2 -38 157 2 8 1128 542 276 92 92 chr17 71302321 71302592 -23970059 - ORR1E LTR MaLR 0 359 89 8 1128 868 151 0 33 chr17 71302684 71302835 -23969816 - B1_Mur4 SINE Alu 0 150 5 8 1128 889 153 7 0 chr17 71303014 71303151 -23969500 + B1_Mus2 SINE Alu 3 140 -7 8 17 489 62 0 0 chr17 71303153 71303218 -23969433 + (TAGA)n Simple_repeat Simple_repeat 4 68 0 8 1129 716 112 17 0 chr17 71303222 71303338 -23969313 + (GGAA)n Simple_repeat Simple_repeat 3 120 0 8 1129 464 45 15 0 chr17 71303427 71303494 -23969157 + (TCTCTG)n Simple_repeat Simple_repeat 3 70 0 8 1129 363 228 196 0 chr17 71303572 71303664 -23968987 - PB1D10 SINE Alu -6 111 2 8 1129 1217 55 7 0 chr17 71303749 71303895 -23968756 + B1_Mus1 SINE Alu 1 147 -1 8 1129 564 210 0 0 chr17 71304430 71304597 -23968054 + (TG)n Simple_repeat Simple_repeat 1 167 0 8 1129 478 294 24 32 chr17 71304607 71304730 -23967921 - RSINE1 SINE B4 0 165 44 8 1129 988 203 25 5 chr17 71305499 71305702 -23966949 + B3 SINE B2 5 211 -5 8 1129 26 30 0 0 chr17 71307282 71307315 -23965336 + AT_rich Low_complexity Low_complexity 1 33 0 8 1129 702 0 0 0 chr17 71307385 71307463 -23965188 + (CGG)n Simple_repeat Simple_repeat 1 78 0 8 1129 570 98 0 0 chr17 71307618 71307700 -23964951 + (TTCC)n Simple_repeat Simple_repeat 4 85 0 8 1129 1335 109 16 5 chr17 71307703 71307896 -23964755 - B2_Mm2 SINE B2 0 195 1 8 1129 381 22 0 0 chr17 71308058 71308104 -23964547 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 1129 572 246 102 51 chr17 71308105 71308242 -23964409 + RSINE1 SINE B4 4 147 -18 8 1129 22 0 0 0 chr17 71308266 71308288 -23964363 + AT_rich Low_complexity Low_complexity 1 22 0 8 1129 477 168 0 0 chr17 71308743 71308874 -23963777 + CT-rich Low_complexity Low_complexity 2 132 0 8 1129 1014 122 0 0 chr17 71308883 71309063 -23963588 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 8 1129 812 218 139 56 chr17 71309305 71309572 -23963079 + B4A SINE B4 3 291 -1 8 1129 579 178 47 0 chr17 71309673 71309780 -23962871 + PB1D9 SINE Alu 2 113 -7 8 1129 314 326 0 0 chr17 71309986 71310081 -23962570 - ID_B1 SINE B4 -128 96 2 9 1129 207 0 0 0 chr17 71310274 71310297 -23962354 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 9 1129 425 213 0 87 chr17 71310297 71310389 -23962262 - B1_Mur1 SINE Alu -14 135 49 9 1129 233 287 69 78 chr17 71310310 71310412 -23962239 - MT2B LTR ERVL -323 278 178 9 1129 222 37 0 0 chr17 71310544 71310571 -23962080 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 9 1129 811 39 10 0 chr17 71310922 71311024 -23961627 + B1_Mus1 SINE Alu 33 135 -13 9 1129 297 0 0 0 chr17 71311024 71311057 -23961594 + (TTAA)n Simple_repeat Simple_repeat 4 36 0 9 1129 458 331 20 0 chr17 71311077 71311225 -23961426 + RSINE1 SINE B4 3 153 -12 9 1129 3562 25 0 0 chr17 71311256 71311652 -23960999 - MTA_Mm LTR MaLR 0 396 1 9 1129 9823 18 0 0 chr17 71311652 71312750 -23959901 - MTA_Mm-int LTR MaLR 0 1098 1 9 1129 2127 20 0 0 chr17 71312752 71312997 -23959654 - MT2_Mm LTR ERVL 0 493 249 9 1129 2016 34 0 8 chr17 71312997 71313235 -23959416 + LSU-rRNA_Hsa rRNA rRNA 4501 4736 -299 9 1129 386 60 0 0 chr17 71313467 71313517 -23959134 - MTB_Mm LTR MaLR 0 407 358 9 1129 714 240 71 16 chr17 71313611 71313793 -23958858 + B4 SINE B4 66 257 -35 9 1129 2288 84 132 11 chr17 71313796 71314144 -23958507 + RLTR10 LTR ERVK 1 390 0 9 1129 370 244 30 58 chr17 71314146 71314262 -23958389 - MTB_Mm LTR MaLR -144 235 122 9 1129 518 248 0 0 chr17 71314569 71314670 -23957981 + RSINE1 SINE B4 44 144 -21 9 1129 255 264 45 22 chr17 71316100 71316189 -23956462 + MTE2a LTR MaLR 289 379 0 9 1129 836 143 63 14 chr17 71316196 71316338 -23956313 + B1_Mur4 SINE Alu 2 150 0 9 1129 249 33 0 0 chr17 71316349 71316379 -23956272 + (A)n Simple_repeat Simple_repeat 1 30 0 9 1129 357 24 0 0 chr17 71316458 71316500 -23956151 + (CAT)n Simple_repeat Simple_repeat 3 44 0 9 1129 423 0 0 0 chr17 71316943 71316990 -23955661 + (TC)n Simple_repeat Simple_repeat 2 48 0 9 1129 225 0 0 0 chr17 71316990 71317014 -23955637 + (TG)n Simple_repeat Simple_repeat 2 26 0 9 1129 216 0 0 0 chr17 71317436 71317460 -23955191 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 9 1129 241 146 41 20 chr17 71317904 71317953 -23954698 + GA-rich Low_complexity Low_complexity 1 50 0 9 1129 589 66 6 0 chr17 71318334 71318425 -23954226 + B1_Mus2 SINE Alu 56 149 0 9 1129 837 237 21 0 chr17 71318644 71318838 -23953813 - B3 SINE B2 -18 198 1 9 1129 2311 157 29 12 chr17 71319312 71319726 -23952925 + MTC LTR MaLR 1 421 0 9 1129 215 31 31 0 chr17 71319835 71319867 -23952784 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 9 1129 1414 52 40 0 chr17 71319970 71320143 -23952508 + B2_Mm2 SINE B2 1 180 -15 9 1129 222 37 0 0 chr17 71320143 71320170 -23952481 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 9 1129 227 253 91 57 chr17 71320475 71320563 -23952088 - MER34 LTR ERV1 -27 515 425 9 1129 690 228 0 13 chr17 71321003 71321154 -23951497 - B1_Mur1 SINE Alu 0 149 1 9 1129 668 262 79 24 chr17 71321185 71321349 -23951302 - B3A SINE B2 -24 174 2 9 1129 303 149 12 98 chr17 71321378 71321460 -23951191 + RLTR25B LTR ERVK 428 502 -526 9 1129 675 110 110 0 chr17 71321390 71321499 -23951152 + B1_Mus2 SINE Alu 24 144 -3 9 1129 642 183 225 23 chr17 71321538 71321711 -23950940 + B3 SINE B2 5 212 -4 9 1129 689 234 108 15 chr17 71321815 71322019 -23950632 - ID_B1 SINE B4 -1 223 1 9 1129 1475 49 0 5 chr17 71322037 71322221 -23950430 + L1_Mus1 LINE L1 6385 6567 0 9 1129 1127 76 0 0 chr17 71322229 71322374 -23950277 + B1_Mus1 SINE Alu 4 148 0 9 1129 213 39 0 0 chr17 71322421 71322447 -23950204 + (CA)n Simple_repeat Simple_repeat 2 27 0 9 1129 30 59 0 0 chr17 71323295 71323346 -23949305 + AT_rich Low_complexity Low_complexity 1 51 0 9 1129 567 240 209 6 chr17 71323981 71324153 -23948498 + B3 SINE B2 9 215 -1 9 1129 406 298 81 24 chr17 71325082 71325206 -23947445 - RSINE1 SINE B4 -26 139 9 9 1129 180 0 0 0 chr17 71325235 71325255 -23947396 + (CAA)n Simple_repeat Simple_repeat 1 20 0 9 1129 325 311 81 62 chr17 71325675 71325836 -23946815 - RSINE1 SINE B4 0 165 2 9 1129 405 0 0 0 chr17 71326115 71326160 -23946491 + (CA)n Simple_repeat Simple_repeat 1 45 0 9 1129 25 0 0 0 chr17 71326647 71326672 -23945979 + AT_rich Low_complexity Low_complexity 1 25 0 9 1129 471 250 0 27 chr17 71326672 71326783 -23945868 - PB1D9 SINE Alu 0 120 13 9 1129 295 171 97 59 chr17 71326947 71327038 -23945613 - B1_Mm SINE Alu 0 147 9 9 1129 1145 72 0 0 chr17 71327063 71327201 -23945450 + B1_Mus1 SINE Alu 1 138 -10 9 1129 284 0 0 27 chr17 71327201 71327238 -23945413 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 9 1129 437 171 80 18 chr17 71327258 71327371 -23945280 - B3 SINE B2 0 216 97 9 1129 189 0 0 0 chr17 71328067 71328088 -23944563 + (TTTG)n Simple_repeat Simple_repeat 1 21 0 9 1129 628 200 79 0 chr17 71328102 71328242 -23944409 - B3 SINE B2 0 216 66 9 1129 1516 117 8 39 chr17 71328239 71328496 -23944155 - MTC LTR MaLR -172 249 1 9 1129 248 193 53 0 chr17 71328496 71328553 -23944098 - tRNA-Ala-GCY_ tRNA tRNA -15 60 1 9 1129 597 231 86 75 chr17 71329052 71329118 -23943533 - B4A SINE B4 -2 290 232 9 1129 860 94 177 24 chr17 71329118 71329282 -23943369 - B2_Mm2 SINE B2 -2 193 5 9 1129 597 231 86 75 chr17 71329282 71329402 -23943249 - B4A SINE B4 -61 231 102 9 1129 226 247 12 47 chr17 71329402 71329487 -23943164 - ID2 SINE ID 0 83 2 9 1129 4111 106 45 38 chr17 71329508 71330174 -23942477 + Lx2 LINE L1 6327 6997 0 9 1129 289 267 148 0 chr17 71330215 71330316 -23942335 + PB1D10 SINE Alu 2 117 0 9 1129 189 0 0 0 chr17 71330329 71330350 -23942301 + (CA)n Simple_repeat Simple_repeat 1 21 0 9 1129 345 222 12 47 chr17 71330351 71330436 -23942215 - PB1D10 SINE Alu -7 110 29 9 1129 301 282 26 0 chr17 71330450 71330528 -23942123 + ID4_ SINE ID 2 81 -2 9 1129 389 53 0 18 chr17 71330540 71330597 -23942054 + (CA)n Simple_repeat Simple_repeat 1 56 0 9 1129 4600 135 72 20 chr17 71330722 71331510 -23941141 + RMER19B LTR ERVK 1 829 -73 9 1129 234 371 28 22 chr17 71331761 71331940 -23940711 + L2 LINE L2 2333 2512 -907 9 1129 308 304 151 7 chr17 71332151 71332290 -23940361 - RSINE1 SINE B4 -6 159 1 9 1129 235 238 80 45 chr17 71332290 71332378 -23940273 + RCHARR1 DNA MER1_type 882 972 -2 9 1129 3398 45 0 0 chr17 71332799 71333195 -23939456 + MTA_Mm LTR MaLR 1 396 0 9 1129 303 317 116 35 chr17 71333650 71333823 -23938828 + B2_Mm2 SINE B2 1 187 -8 9 1129 217 200 25 0 chr17 71333832 71333872 -23938779 + MER5B DNA MER1_type 137 177 -1 9 1129 376 255 20 0 chr17 71334108 71334206 -23938445 + B4 SINE B4 186 285 -7 9 1129 1204 115 17 6 chr17 71334328 71334503 -23938148 - B2_Mm2 SINE B2 -16 179 3 9 1129 1725 16 5 0 chr17 71334520 71334712 -23937939 - B2_Mm1a SINE B2 0 193 1 9 1129 252 292 11 22 chr17 71335100 71335191 -23937460 + MLT1F LTR MaLR 256 345 -203 9 1129 684 177 27 34 chr17 71335256 71335402 -23937249 + B1_Mur3 SINE Alu 1 145 -4 9 1129 536 172 70 10 chr17 71335781 71335881 -23936770 + B1F SINE Alu 43 148 -1 9 1129 278 316 145 41 chr17 71336027 71336172 -23936479 + B3A SINE B2 9 168 -30 9 1129 182 343 30 0 chr17 71336407 71336474 -23936177 + L3 LINE CR1 3362 3430 -1059 9 1129 247 288 179 13 chr17 71336883 71336910 -23935741 - B4A SINE B4 -45 247 167 9 1129 524 223 0 0 chr17 71336910 71337004 -23935647 - PB1D10 SINE Alu -5 112 19 9 1129 247 288 179 13 chr17 71337004 71337033 -23935618 - B4A SINE B4 -45 166 71 9 1129 243 200 38 114 chr17 71337094 71337144 -23935507 + MT2C_Mm LTR ERVL 163 206 -269 9 1129 213 219 0 0 chr17 71337144 71337185 -23935466 + B1F2 SINE Alu 2 42 -107 9 1129 225 246 32 16 chr17 71337266 71337328 -23935323 - ID4 SINE ID -2 81 19 9 1129 271 307 68 61 chr17 71337665 71337828 -23934823 - MIR SINE MIR -10 252 89 9 1129 232 273 91 0 chr17 71338121 71338198 -23934453 + LTR48 LTR ERV1 469 552 -235 9 1129 1187 35 21 0 chr17 71338218 71338362 -23934289 - B1_Mus1 SINE Alu 0 148 2 9 1129 324 0 0 0 chr17 71338691 71338727 -23933924 + (TG)n Simple_repeat Simple_repeat 1 36 0 9 1129 303 121 0 0 chr17 71338727 71338785 -23933866 + (GA)n Simple_repeat Simple_repeat 2 59 0 9 1129 672 151 39 8 chr17 71340481 71340608 -23932043 + B1_Mur4 SINE Alu 2 132 -18 9 1129 430 314 95 22 chr17 71340723 71340860 -23931791 + RSINE1 SINE B4 2 148 -17 9 1129 316 260 0 25 chr17 71341247 71341326 -23931325 + B3A SINE B2 8 84 -114 9 1129 1231 83 30 0 chr17 71341635 71341804 -23930847 + B2_Mm1t SINE B2 1 174 -19 9 1129 186 43 0 0 chr17 71344884 71344907 -23927744 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 9 1129 29 0 0 0 chr17 71347034 71347063 -23925588 + AT_rich Low_complexity Low_complexity 1 29 0 9 1129 29 0 0 0 chr17 71347111 71347140 -23925511 + AT_rich Low_complexity Low_complexity 1 29 0 9 1129 1204 83 61 6 chr17 71348104 71348285 -23924366 + B2_Mm1a SINE B2 1 191 -2 9 1129 938 42 0 8 chr17 71348966 71349086 -23923565 + B1_Mus1 SINE Alu 30 148 0 9 1129 199 0 65 0 chr17 71349086 71349117 -23923534 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 9 1129 279 174 0 0 chr17 71349875 71349921 -23922730 - tRNA-Ala-GCY_ tRNA tRNA -29 46 1 9 1129 316 252 101 55 chr17 71350089 71350198 -23922453 + PB1D7 SINE Alu 6 119 -1 1 1129 27 96 0 0 chr17 71351352 71351435 -23921216 + GC_rich Low_complexity Low_complexity 1 83 0 1 1129 684 173 132 30 chr17 71353558 71353725 -23918926 - B2_Mm2 SINE B2 -11 184 1 1 1129 1564 118 83 134 chr17 71353741 71354114 -23918537 + ORR1B1 LTR MaLR 41 394 0 1 1129 1190 99 41 0 chr17 71354141 71354312 -23918339 + B2_Mm1t SINE B2 2 179 -14 1 1129 488 82 310 52 chr17 71354359 71354475 -23918176 + B2_Mm2 SINE B2 47 192 -3 1 1129 293 279 198 0 chr17 71354603 71354714 -23917937 - B4A SINE B4 -35 257 125 1 1129 558 231 111 0 chr17 71354837 71354945 -23917706 + RSINE1 SINE B4 3 122 -43 1 1129 4647 168 176 25 chr17 71354947 71355767 -23916884 + RMER12 LTR ERVK 8 935 -387 1 1129 288 0 0 0 chr17 71355767 71355799 -23916852 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1129 4647 171 170 23 chr17 71355799 71356047 -23916604 + RMER12 LTR ERVK 936 1293 -29 1 1129 566 332 90 8 chr17 71356202 71356457 -23916194 - MLT1A LTR MaLR -35 339 64 1 1129 276 277 170 0 chr17 71356530 71356624 -23916027 + MER20 DNA MER1_type 22 131 -88 1 1129 256 318 114 38 chr17 71356763 71356957 -23915694 - MIR SINE MIR -28 240 37 1 1129 317 366 39 47 chr17 71357129 71357361 -23915290 - HAL1-3A_ME LINE L1 -653 2205 1976 1 1129 306 143 0 0 chr17 71357362 71357425 -23915226 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 1129 538 288 52 0 chr17 71357432 71357585 -23915066 - RSINE1 SINE B4 0 165 5 1 1129 1541 62 16 5 chr17 71357628 71357821 -23914830 + B2_Mm2 SINE B2 1 195 0 1 1129 786 269 42 5 chr17 71357858 71358071 -23914580 - ID_B1 SINE B4 -2 222 2 1 1129 180 0 0 0 chr17 71358124 71358144 -23914507 + (TC)n Simple_repeat Simple_repeat 2 21 0 1 1129 822 193 122 20 chr17 71358391 71358587 -23914064 - B3 SINE B2 0 216 1 1 1129 349 291 60 0 chr17 71358756 71358873 -23913778 + ID_B1 SINE B4 1 124 -100 1 1129 238 294 56 89 chr17 71359410 71359623 -23913028 - L1MA10 LINE L1 -3 6331 5972 1 1129 1713 169 33 3 chr17 71360066 71360369 -23912282 - ORR1A4 LTR MaLR 0 329 18 1 1129 426 182 9 26 chr17 71360381 71360494 -23912157 - ORR1A1 LTR MaLR -235 111 1 1 1129 282 336 103 91 chr17 71360494 71360734 -23911917 - MLT1M LTR MaLR -308 364 122 1 1129 402 21 0 0 chr17 71360776 71360823 -23911828 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 1129 1519 32 10 65 chr17 71360901 71361101 -23911550 - B2_Mm1a SINE B2 -4 189 1 1 1129 287 265 86 134 chr17 71361119 71361298 -23911353 + MIRb SINE MIR 61 235 -33 1 1129 3980 154 37 6 chr17 71361298 71361969 -23910682 + RLTR17 LTR ERVK 1 692 0 1 1129 260 265 86 134 chr17 71361969 71361998 -23910653 + MIR SINE MIR 227 259 -3 1 1129 1175 68 7 0 chr17 71362022 71362169 -23910482 + B1_Mus1 SINE Alu 1 148 0 1 1129 229 274 161 0 chr17 71362433 71362495 -23910156 - PB1D10 SINE Alu -37 80 9 1 1129 1612 243 24 11 chr17 71363782 71364156 -23908495 + MTEb LTR MaLR 1 379 0 1 1129 501 193 13 17 chr17 71365040 71365349 -23907302 + (CA)n Simple_repeat Simple_repeat 1 307 0 1 1129 403 169 14 0 chr17 71365361 71365432 -23907219 + HAL1-3A_ME LINE L1 1973 2044 -814 1 1129 4094 148 82 4 chr17 71366354 71366465 -23906186 - RMER1A Other Other -1 1029 912 1 1129 342 0 0 0 chr17 71366465 71366503 -23906148 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1129 4094 148 82 4 chr17 71366503 71366520 -23906131 - RMER1A Other Other -119 911 880 1 1129 195 42 0 0 chr17 71366520 71366544 -23906107 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1 1129 4094 185 56 67 chr17 71366544 71367617 -23905034 - RMER1A Other Other -129 937 1 1 1129 432 139 0 0 chr17 71367980 71368059 -23904592 + (GGGA)n Simple_repeat Simple_repeat 3 81 0 1 1129 210 286 0 35 chr17 71368135 71368193 -23904458 - B4A SINE B4 -169 123 68 1 1129 235 186 15 106 chr17 71369172 71369238 -23903413 - Charlie10b DNA MER1_type -130 112 53 1 1129 514 310 20 7 chr17 71370519 71370665 -23901986 + RSINE1 SINE B4 18 165 0 1 1129 549 244 37 30 chr17 71370886 71371021 -23901630 - B1_Mur1 SINE Alu -11 138 3 1 1129 620 323 116 39 chr17 71371043 71371398 -23901253 + L2 LINE L2 2319 2700 -719 1 1129 355 333 9 0 chr17 71371425 71371539 -23901112 - MLT1B LTR MaLR -8 382 268 1 1129 1175 61 0 13 chr17 71371584 71371733 -23900918 - B1_Mus1 SINE Alu -1 147 1 1 1129 238 306 19 48 chr17 71373030 71373133 -23899518 - LTR65 LTR ERV1 -8 661 562 1 1129 489 355 41 0 chr17 71373174 71373343 -23899308 - LTR65 LTR ERV1 -262 407 232 1 1129 716 243 24 24 chr17 71373350 71373561 -23899090 - B3 SINE B2 -5 211 1 1 1129 1159 274 79 94 chr17 71373585 71374117 -23898534 - MT2A LTR ERVL -9 524 1 1 1129 590 167 83 0 chr17 71374117 71374249 -23898402 - MERVL_2A-int LTR ERVL 0 5761 5619 1 1129 1937 120 51 37 chr17 71374247 71374601 -23898050 - MERVL_2A-int LTR ERVL -71 5690 5332 1 1129 313 315 139 20 chr17 71374609 71374810 -23897841 - LTR65 LTR ERV1 -444 225 1 1 1129 1185 62 0 7 chr17 71375044 71375191 -23897460 + B1_Mus1 SINE Alu 2 147 -1 1 1129 396 0 0 0 chr17 71375634 71375678 -23896973 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1129 833 292 86 4 chr17 71376846 71377114 -23895537 - B4A SINE B4 -1 291 2 1 1129 296 281 22 19 chr17 71377221 71377350 -23895301 + RSINE1 SINE B4 2 131 -161 1 1129 433 250 8 84 chr17 71377559 71377575 -23895076 + ID SINE ID 76 81 -143 1 1129 657 215 0 0 chr17 71377575 71377696 -23894955 + B1_Mus2 SINE Alu 2 122 -25 1 1129 696 164 0 0 chr17 71377694 71377804 -23894847 - B3 SINE B2 -105 111 2 1 1129 27 49 0 0 chr17 71377929 71377970 -23894681 + AT_rich Low_complexity Low_complexity 1 41 0 1 1129 393 75 0 0 chr17 71377973 71378026 -23894625 + (TTTC)n Simple_repeat Simple_repeat 1 53 0 1 1129 823 184 6 11 chr17 71378026 71378207 -23894444 + CT-rich Low_complexity Low_complexity 1 180 0 1 1129 1043 135 11 0 chr17 71378207 71378385 -23894266 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1 1129 216 0 0 0 chr17 71378385 71378409 -23894242 + (TCCC)n Simple_repeat Simple_repeat 1 24 0 1 1129 546 16 0 0 chr17 71378409 71378472 -23894179 + (TTTC)n Simple_repeat Simple_repeat 4 66 0 1 1129 750 111 92 1 chr17 71378473 71378616 -23894035 - B2_Mm1t SINE B2 -34 159 2 1 1129 597 329 37 6 chr17 71378616 71378943 -23893708 - L1M4 LINE L1 -2582 3564 3228 1 1129 225 121 51 17 chr17 71378982 71379041 -23893610 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 1129 305 243 54 0 chr17 71379222 71379296 -23893355 - PB1D10 SINE Alu 0 117 40 1 1129 991 131 19 13 chr17 71379372 71379527 -23893124 - B2_Mm2 SINE B2 -31 164 9 1 1129 425 218 6 0 chr17 71379675 71379840 -23892811 + (TG)n Simple_repeat Simple_repeat 2 167 0 1 1129 1125 281 36 4 chr17 71379864 71380139 -23892512 - B4 SINE B4 0 292 9 1 1129 340 222 55 14 chr17 71380567 71380640 -23892011 - ID_B1 SINE B4 -65 159 84 1 1129 426 131 0 0 chr17 71380580 71380641 -23892010 - B1_Mus1 SINE Alu -86 62 2 1 1129 910 55 141 0 chr17 71381165 71381293 -23891358 - B1_Mus1 SINE Alu 0 148 3 1 1129 379 306 9 9 chr17 71381337 71381446 -23891205 + PB1D7 SINE Alu 1 109 -11 1 1129 731 204 22 0 chr17 71381541 71381678 -23890973 + B1_Mur2 SINE Alu 1 140 -9 1 1129 305 192 19 0 chr17 71383227 71383279 -23889372 + ID4 SINE ID 31 83 0 1 1129 374 254 89 8 chr17 71383404 71383527 -23889124 - Lx5 LINE L1 -1 7049 6917 1 1129 222 191 0 0 chr17 71383530 71383572 -23889079 + C-rich Low_complexity Low_complexity 1 42 0 1 1129 227 225 0 0 chr17 71384099 71384139 -23888512 - MIR SINE MIR 0 262 223 1 1129 258 32 0 0 chr17 71384321 71384352 -23888299 + (CATATA)n Simple_repeat Simple_repeat 4 34 0 1 1129 236 402 17 0 chr17 71384885 71385002 -23887649 + MIRb SINE MIR 96 214 -54 1 1129 1419 85 16 0 chr17 71385033 71385222 -23887429 - B2_Mm2 SINE B2 -2 193 2 1 1129 774 223 62 10 chr17 71385321 71385516 -23887135 - B3 SINE B2 -7 209 5 1 1129 603 318 28 0 chr17 71386228 71386442 -23886209 + ID_B1 SINE B4 5 224 0 1 1129 915 251 97 82 chr17 71386959 71387228 -23885423 + B4A SINE B4 20 292 0 1 1129 254 308 0 21 chr17 71387229 71387322 -23885329 + (CATA)n Simple_repeat Simple_repeat 4 94 0 1 1129 219 69 0 0 chr17 71387326 71387355 -23885296 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1129 195 42 0 0 chr17 71388740 71388764 -23883887 + (CCCCCA)n Simple_repeat Simple_repeat 2 25 0 1 1129 508 206 0 0 chr17 71388767 71388869 -23883782 + ID_B1 SINE B4 117 218 -6 1 1129 501 248 71 57 chr17 71390577 71390718 -23881933 - RSINE1 SINE B4 0 165 23 1 1129 513 293 78 43 chr17 71390879 71391161 -23881490 + B4A SINE B4 1 292 0 1 1129 268 260 66 40 chr17 71391738 71391890 -23880761 + MIRb SINE MIR 31 186 -82 1 1129 311 167 0 15 chr17 71392037 71392104 -23880547 + CT-rich Low_complexity Low_complexity 2 67 0 1 1129 185 86 57 0 chr17 71392119 71392154 -23880497 + (TATG)n Simple_repeat Simple_repeat 2 38 0 1 1129 850 119 9 18 chr17 71392170 71392319 -23880332 - B2_Mm2 SINE B2 -61 155 1 1 1129 261 291 75 75 chr17 71392740 71392967 -23879684 - L1ME3A LINE L1 -12 6161 5935 1 1129 207 0 0 0 chr17 71392971 71392994 -23879657 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1 1129 259 144 367 0 chr17 71392994 71393084 -23879567 - Lx5 LINE L1 0 7050 6928 1 1129 1228 167 65 0 chr17 71393186 71393401 -23879250 - Lx5 LINE L1 -137 6913 6685 1 1129 459 35 0 0 chr17 71393713 71393770 -23878881 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1129 330 215 88 14 chr17 71395513 71395628 -23877023 - RMER4B LTR ERVK -26 559 357 1 1129 1178 61 0 13 chr17 71395954 71396103 -23876548 + B1_Mus1 SINE Alu 2 148 0 1 1129 183 80 0 0 chr17 71396107 71396132 -23876519 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1129 180 242 32 16 chr17 71396168 71396231 -23876420 - MIR SINE MIR -44 218 155 1 1129 423 187 0 27 chr17 71397358 71397468 -23875183 + (TA)n Simple_repeat Simple_repeat 1 107 0 1 1129 251 240 0 0 chr17 71397469 71397519 -23875132 - B4 SINE B4 -157 135 86 1 1129 390 339 30 153 chr17 71397889 71398018 -23874633 + MER45R DNA Tip100 1 125 -1456 1 1129 958 168 76 5 chr17 71398018 71398215 -23874436 - B3 SINE B2 -5 211 1 1 1129 390 339 30 153 chr17 71398215 71398512 -23874139 + MER45R DNA Tip100 126 375 -1206 1 1129 1133 95 0 0 chr17 71398512 71398659 -23873992 - B1_Mus1 SINE Alu 0 148 2 1 1129 390 339 30 153 chr17 71398659 71398747 -23873904 + MER45R DNA Tip100 376 451 -1130 1 1129 8603 112 78 19 chr17 71398747 71399314 -23873337 + RLTR21 LTR ERVK 1 569 -1003 1 1129 3703 64 31 2 chr17 71399314 71399799 -23872852 - L1_Mus4 LINE L1 0 6636 6138 1 1129 8603 112 78 19 chr17 71399799 71400309 -23872342 + RLTR21 LTR ERVK 570 1127 -445 1 1129 468 81 0 0 chr17 71400309 71400383 -23872268 + (TG)n Simple_repeat Simple_repeat 1 74 0 1 1129 8603 112 78 19 chr17 71400383 71400523 -23872128 + RLTR21 LTR ERVK 1128 1303 -269 1 1129 333 0 0 0 chr17 71400523 71400560 -23872091 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1129 8603 112 78 19 chr17 71400560 71400825 -23871826 + RLTR21 LTR ERVK 1304 1572 0 1 1129 890 291 147 16 chr17 71400836 71400986 -23871665 + MER45R DNA Tip100 487 652 -929 1 1129 1210 28 7 0 chr17 71400986 71401130 -23871521 - B1_Mus1 SINE Alu -1 147 3 1 1129 890 291 147 16 chr17 71401130 71401481 -23871170 + MER45R DNA Tip100 653 1054 -527 1 1129 254 83 0 0 chr17 71401575 71401611 -23871040 - MTC LTR MaLR -4 417 382 1 1129 238 296 172 36 chr17 71403122 71403343 -23869308 - MER74B LTR ERVL -82 540 290 1 1129 2847 117 55 13 chr17 71403579 71404055 -23868596 - Lx4B LINE L1 0 7058 6563 1 1129 2222 97 0 12 chr17 71404261 71404584 -23868067 - L1_Mus4 LINE L1 -1 6635 6317 1 1129 244 284 14 0 chr17 71404617 71404691 -23867960 + B4A SINE B4 2 76 -216 1 1129 238 326 137 39 chr17 71405835 71406119 -23866532 - L1M4 LINE L1 -275 5899 5588 1 1129 2126 108 7 3 chr17 71406415 71406722 -23865929 - Lx2 LINE L1 -1 6996 6689 1 1129 244 175 0 0 chr17 71406766 71406806 -23865845 - tRNA-Ala-GCG tRNA tRNA -3 72 33 1 1129 479 133 0 12 chr17 71406802 71406886 -23865765 + 4.5SRNA scRNA scRNA 7 89 -5 1 1129 244 119 95 0 chr17 71406890 71406932 -23865719 + tRNA-Met-i tRNA tRNA 1 46 -29 1 1129 432 0 0 0 chr17 71406954 71407002 -23865649 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1129 240 211 19 0 chr17 71407004 71407056 -23865595 + GA-rich Low_complexity Low_complexity 1 53 0 1 1129 572 250 127 99 chr17 71407182 71407466 -23865185 + B4A SINE B4 1 292 0 1 1129 210 209 23 0 chr17 71407470 71407513 -23865138 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 1 1129 23 68 0 0 chr17 71407744 71407788 -23864863 + AT_rich Low_complexity Low_complexity 1 44 0 1 1129 466 224 9 45 chr17 71408050 71408162 -23864489 + PB1D10 SINE Alu 2 109 -8 1 1129 23 86 0 0 chr17 71408280 71408338 -23864313 + AT_rich Low_complexity Low_complexity 1 58 0 1 1129 1521 198 95 8 chr17 71408631 71408998 -23863653 - MTD LTR MaLR -19 400 2 1 1129 782 226 12 0 chr17 71409194 71409358 -23863293 + MTC-int LTR MaLR 302 467 -791 1 1129 252 148 0 0 chr17 71409660 71409721 -23862930 + (CACCAT)n Simple_repeat Simple_repeat 5 65 0 1 1129 306 137 0 19 chr17 71410717 71410769 -23861882 - HAL1-3A_ME LINE L1 -835 2023 1973 1 1129 298 222 78 0 chr17 71411777 71411867 -23860784 - MIRb SINE MIR -162 106 10 1 1129 226 275 178 68 chr17 71412039 71412230 -23860421 - MamRep488 DNA hAT -3 216 5 1 1129 301 229 139 0 chr17 71412555 71412637 -23860014 + PB1D10 SINE Alu 2 95 -25 1 1129 875 189 60 15 chr17 71413018 71413217 -23859434 + B3 SINE B2 5 212 -4 1 1129 379 260 20 20 chr17 71413367 71413469 -23859182 + RSINE1 SINE B4 64 165 0 1 1129 569 146 8 0 chr17 71413469 71413592 -23859059 + (CA)n Simple_repeat Simple_repeat 1 124 0 1 1129 228 35 0 0 chr17 71414033 71414062 -23858589 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 1 1129 777 238 0 6 chr17 71414548 71414709 -23857942 + RSINE1 SINE B4 3 162 -3 1 1129 21 0 0 0 chr17 71414747 71414768 -23857883 + AT_rich Low_complexity Low_complexity 1 21 0 1 1129 419 107 13 0 chr17 71415379 71415454 -23857197 + (TATG)n Simple_repeat Simple_repeat 2 77 0 1 1129 717 129 50 8 chr17 71415456 71415698 -23856953 + (TCTA)n Simple_repeat Simple_repeat 1 252 0 1 1129 690 213 0 43 chr17 71415720 71415882 -23856769 - RSINE1 SINE B4 0 165 11 1 1129 738 291 32 44 chr17 71415940 71416188 -23856463 - Lx6 LINE L1 -1 7459 7215 1 1129 441 284 31 25 chr17 71417264 71417423 -23855228 - L1MD LINE L1 -558 5684 5525 1 1129 341 335 130 19 chr17 71417438 71417700 -23854951 - B4A SINE B4 0 292 2 1 1129 226 284 132 16 chr17 71417896 71418025 -23854626 - L1MEc LINE L1 -4375 2025 1882 1 1129 944 216 39 0 chr17 71418074 71418282 -23854369 - B3 SINE B2 0 216 1 1 1129 395 292 50 17 chr17 71418423 71418653 -23853998 - L1MEc LINE L1 -4436 1903 1646 1 1129 391 171 0 125 chr17 71418722 71418842 -23853809 + MT2B LTR ERVL 160 264 -337 1 1129 940 74 0 0 chr17 71418742 71418877 -23853774 + B1_Mus1 SINE Alu 14 148 0 1 1129 315 0 0 0 chr17 71420007 71420042 -23852609 + (TC)n Simple_repeat Simple_repeat 1 35 0 1 1129 1068 99 0 0 chr17 71420042 71420346 -23852305 + (CA)n Simple_repeat Simple_repeat 1 304 0 1 1129 395 263 180 46 chr17 71420405 71420688 -23851963 - L1MEc LINE L1 -4871 1529 1209 1 1129 255 319 25 25 chr17 71420775 71420897 -23851754 - L1MEc LINE L1 -5544 856 735 1 1129 187 190 0 33 chr17 71420942 71421002 -23851649 + GA-rich Low_complexity Low_complexity 2 59 0 1 1129 1172 82 0 0 chr17 71422652 71422799 -23849852 + B1_Mus1 SINE Alu 2 148 0 1 1129 342 152 0 0 chr17 71422801 71422860 -23849791 + A-rich Low_complexity Low_complexity 1 59 0 1 1129 296 258 0 0 chr17 71423002 71423068 -23849583 - RMER15 LTR ERVL -107 468 403 1 1129 210 135 0 0 chr17 71423242 71423270 -23849381 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 1129 225 108 0 0 chr17 71423270 71423307 -23849344 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1129 210 135 0 0 chr17 71423307 71423315 -23849336 + (TA)n Simple_repeat Simple_repeat 2 9 0 1 1129 339 292 84 9 chr17 71423342 71423449 -23849202 - RSINE1 SINE B4 -45 120 6 1 1129 369 246 13 80 chr17 71424769 71424919 -23847732 - MIRb SINE MIR -77 191 52 1 1129 204 135 0 0 chr17 71425733 71425770 -23846881 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 1 1129 468 255 36 7 chr17 71425770 71425908 -23846743 - B1F1 SINE Alu -1 148 7 1 1129 198 282 229 14 chr17 71426060 71426204 -23846447 - L2a LINE L2 -53 3373 3199 1 1129 249 108 0 0 chr17 71427283 71427320 -23845331 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1129 399 41 0 0 chr17 71427408 71427457 -23845194 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1129 397 283 0 9 chr17 71427491 71427598 -23845053 + B3A SINE B2 92 197 -1 1 1129 22 0 0 0 chr17 71427733 71427755 -23844896 + AT_rich Low_complexity Low_complexity 1 22 0 1 1129 3328 36 8 8 chr17 71428096 71428492 -23844159 - MTA_Mm LTR MaLR 0 396 1 1 1129 699 183 0 17 chr17 71429217 71429395 -23843256 + (TA)n Simple_repeat Simple_repeat 2 176 0 1 1129 1258 34 7 0 chr17 71429572 71429719 -23842932 + B1_Mus1 SINE Alu 1 148 0 1 1129 580 99 13 54 chr17 71429762 71429911 -23842740 + (TCTCTG)n Simple_repeat Simple_repeat 2 144 0 1 1129 466 208 39 10 chr17 71430927 71431029 -23841622 + PB1D10 SINE Alu 5 109 -8 1 1129 28 0 0 0 chr17 71432462 71432490 -23840161 + AT_rich Low_complexity Low_complexity 1 28 0 1 1129 24 0 0 0 chr17 71433066 71433090 -23839561 + AT_rich Low_complexity Low_complexity 1 24 0 1 1129 769 108 93 0 chr17 71433797 71433926 -23838725 + RMER6A LTR ERVK 504 644 -112 1 1130 245 343 88 6 chr17 71434395 71434577 -23838074 - L1M5 LINE L1 -1065 5081 4885 1 1130 294 62 30 45 chr17 71434757 71434824 -23837827 + (CAAAAA)n Simple_repeat Simple_repeat 1 66 0 1 1130 248 274 25 25 chr17 71434898 71435018 -23837633 - L1M5 LINE L1 -1530 4616 4497 1 1130 259 279 38 19 chr17 71435707 71435813 -23836838 - L1M5 LINE L1 -3822 2324 2217 1 1130 305 284 52 10 chr17 71435820 71435916 -23836735 + PB1D10 SINE Alu 12 111 -6 1 1130 252 293 21 42 chr17 71436166 71436262 -23836389 - RSINE1 SINE B4 -30 135 42 1 1130 301 72 17 35 chr17 71436269 71436327 -23836324 + (TTG)n Simple_repeat Simple_repeat 1 57 0 1 1130 500 254 8 0 chr17 71436332 71436454 -23836197 - B1_Mur1 SINE Alu -25 124 2 1 1130 457 246 17 8 chr17 71436474 71436593 -23836058 - B3 SINE B2 0 216 97 1 1130 225 279 0 56 chr17 71438323 71438395 -23834256 - MIRc SINE MIR -157 111 44 1 1130 2088 116 58 6 chr17 71439935 71440152 -23832499 + Lx2 LINE L1 6650 6866 -131 1 1130 186 43 0 0 chr17 71440152 71440175 -23832476 + (TGGG)n Simple_repeat Simple_repeat 3 25 0 1 1130 2088 116 58 6 chr17 71440175 71440287 -23832364 + Lx2 LINE L1 6867 6994 -3 1 1130 440 275 32 32 chr17 71440687 71440811 -23831840 + ID_B1 SINE B4 90 213 -11 1 1130 183 42 0 0 chr17 71440814 71440838 -23831813 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 1 1130 21 36 0 0 chr17 71441142 71441170 -23831481 + AT_rich Low_complexity Low_complexity 1 28 0 1 1130 1614 48 19 0 chr17 71441170 71441377 -23831274 - L1_Mus2 LINE L1 0 6566 6356 1 1130 323 279 133 98 chr17 71444794 71444997 -23827654 - ORR1E LTR MaLR -149 210 1 1 1130 196 100 0 48 chr17 71445699 71445741 -23826910 + (AGGGGG)n Simple_repeat Simple_repeat 3 42 0 1 1130 662 247 91 0 chr17 71445745 71445899 -23826752 - B3A SINE B2 -30 168 1 1 1130 181 296 0 0 chr17 71445987 71446031 -23826620 + L4 LINE RTE 1083 1126 -903 1 1130 3468 52 65 28 chr17 71447313 71447771 -23824880 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1130 1206 48 7 0 chr17 71448438 71448585 -23824066 - B1_Mus1 SINE Alu 0 148 1 1 1130 278 277 67 29 chr17 71450709 71450813 -23821838 + B1F1 SINE Alu 1 108 -41 1 1130 262 333 33 33 chr17 71450718 71450839 -23821812 + ID_B1 SINE B4 91 211 -13 1 1130 270 73 0 0 chr17 71450851 71450892 -23821759 + (T)n Simple_repeat Simple_repeat 1 41 0 1 1130 225 268 18 0 chr17 71450963 71451019 -23821632 + GA-rich Low_complexity Low_complexity 1 57 0 1 1130 545 279 86 43 chr17 71451142 71451329 -23821322 + ID_B1 SINE B4 30 224 0 1 1130 1240 41 0 0 chr17 71453795 71453941 -23818710 - B1_Mm SINE Alu 0 147 2 1 1130 189 0 0 0 chr17 71454952 71454973 -23817678 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1 1130 44 20 0 0 chr17 71454980 71455031 -23817620 + AT_rich Low_complexity Low_complexity 1 51 0 1 1130 431 287 159 23 chr17 71455031 71455084 -23817567 - Lx8 LINE L1 -143 7501 7441 1 1130 432 0 0 0 chr17 71455084 71455132 -23817519 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 1 1130 444 287 159 23 chr17 71455132 71455335 -23817316 - Lx8 LINE L1 -204 7440 7085 1 1130 276 30 0 0 chr17 71456115 71456148 -23816503 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 1130 877 261 28 5 chr17 71456299 71456515 -23816136 + B4A SINE B4 1 221 -71 1 1130 587 277 101 6 chr17 71456521 71456699 -23815952 - B3A SINE B2 -3 195 1 1 1130 637 242 30 0 chr17 71456732 71456864 -23815787 + B1_Mur2 SINE Alu 1 136 -13 1 1130 556 235 2 11 chr17 71456927 71457482 -23815169 + (CA)n Simple_repeat Simple_repeat 1 549 0 1 1130 27 29 0 0 chr17 71457786 71457820 -23814831 + AT_rich Low_complexity Low_complexity 1 34 0 1 1130 1103 92 0 0 chr17 71458269 71458421 -23814230 + B2_Mm2 SINE B2 7 158 -37 1 1130 387 0 0 0 chr17 71458422 71458465 -23814186 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 1 1130 209 30 61 0 chr17 71458574 71458607 -23814044 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1130 500 264 33 0 chr17 71459300 71459421 -23813230 + B4A SINE B4 103 227 -65 1 1130 714 187 8 0 chr17 71459425 71459548 -23813103 + B3 SINE B2 4 127 -89 1 1130 306 203 0 0 chr17 71459636 71459700 -23812951 + B3 SINE B2 153 216 0 1 1130 283 274 0 21 chr17 71459785 71459882 -23812769 + (CATA)n Simple_repeat Simple_repeat 1 95 0 1 1130 687 87 0 0 chr17 71459885 71459989 -23812662 + (CA)n Simple_repeat Simple_repeat 1 104 0 1 1130 216 0 0 0 chr17 71460980 71461004 -23811647 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1130 280 257 14 0 chr17 71462510 71462580 -23810071 + L1MA6 LINE L1 6090 6160 -140 1 1130 2495 59 3 3 chr17 71462584 71462908 -23809743 + L1_Mus4 LINE L1 6311 6634 -2 1 1130 670 198 8 0 chr17 71462920 71463041 -23809610 + B1_Mur1 SINE Alu 2 123 -26 1 1130 511 217 35 101 chr17 71463195 71463364 -23809287 - RMER10A LTR ERVL -282 160 3 1 1130 460 313 30 0 chr17 71463375 71463509 -23809142 + B1F1 SINE Alu 6 143 -6 1 1130 310 294 76 0 chr17 71463550 71463642 -23809009 + PB1D10 SINE Alu 14 112 -5 1 1130 369 206 29 0 chr17 71463696 71463780 -23808871 + ID4 SINE ID 12 97 -55 1 1130 546 186 167 28 chr17 71464105 71464249 -23808402 + RSINE1 SINE B4 2 165 0 1 1130 582 256 0 0 chr17 71464283 71464463 -23808188 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1130 615 296 44 20 chr17 71464532 71464735 -23807916 + B3A SINE B2 2 209 -7 1 1130 555 186 68 0 chr17 71465480 71465598 -23807053 - B1_Mus2 SINE Alu -8 139 14 1 1130 201 74 0 0 chr17 71465752 71465779 -23806872 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 1130 451 288 50 7 chr17 71465780 71465920 -23806731 - RSINE1 SINE B4 -17 148 3 1 1130 293 267 46 28 chr17 71466952 71467060 -23805591 - MER57-int LTR ERV1 -276 7261 7152 1 1130 464 48 16 0 chr17 71467896 71467959 -23804692 + (TG)n Simple_repeat Simple_repeat 2 65 0 1 1130 216 0 0 0 chr17 71468429 71468453 -23804198 + (GA)n Simple_repeat Simple_repeat 2 25 0 1 1130 378 0 0 0 chr17 71468453 71468494 -23804157 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1130 278 317 99 87 chr17 71468555 71468822 -23803829 + B4A SINE B4 3 276 -16 1 1130 702 202 0 0 chr17 71468866 71469039 -23803612 + (TG)n Simple_repeat Simple_repeat 2 174 0 1 1130 569 91 0 22 chr17 71469890 71469980 -23802671 + (TTTC)n Simple_repeat Simple_repeat 2 89 0 1 1130 219 114 0 0 chr17 71470341 71470376 -23802275 + (G)n Simple_repeat Simple_repeat 1 35 0 1 1130 536 207 0 152 chr17 71470579 71470744 -23801907 + B1_Mur2 SINE Alu 2 141 -8 1 1130 1220 21 7 0 chr17 71471564 71471705 -23800946 + B1_Mm SINE Alu 5 146 -1 1 1130 274 258 112 0 chr17 71472444 71472533 -23800118 + PB1D10 SINE Alu 1 99 -18 1 1130 566 271 7 7 chr17 71473057 71473198 -23799453 - RSINE1 SINE B4 -20 145 5 1 1130 882 278 125 28 chr17 71473552 71474052 -23798599 + L1MD1 LINE L1 5416 5991 -251 1 1130 2194 172 131 50 chr17 71474061 71474624 -23798027 + Lx9 LINE L1 7035 7643 -1 1 1130 387 0 0 0 chr17 71477541 71477584 -23795067 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1130 21 0 0 0 chr17 71477959 71477980 -23794671 + AT_rich Low_complexity Low_complexity 1 21 0 1 1130 231 0 24 49 chr17 71478213 71478254 -23794397 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 1 1130 585 254 33 44 chr17 71478407 71478588 -23794063 + B4A SINE B4 1 179 -113 1 1130 422 243 6 0 chr17 71478659 71478836 -23793815 + (CA)n Simple_repeat Simple_repeat 2 179 0 1 1130 536 329 77 5 chr17 71479843 71480051 -23792600 + B4A SINE B4 68 290 -2 1 1130 289 238 8 8 chr17 71480060 71480183 -23792468 + (CA)n Simple_repeat Simple_repeat 2 124 0 1 1130 757 170 13 20 chr17 71480401 71480702 -23791949 + (CATA)n Simple_repeat Simple_repeat 1 298 0 1 1130 479 213 0 9 chr17 71480854 71480963 -23791688 + PB1D10 SINE Alu 10 117 0 1 1130 258 301 44 7 chr17 71481158 71481295 -23791356 + L1M4b LINE L1 2191 2332 -4770 1 1130 720 189 5 155 chr17 71481296 71481457 -23791194 + RSINE1 SINE B4 1 141 -24 1 1130 279 0 0 0 chr17 71481457 71481488 -23791163 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1130 2299 128 19 6 chr17 71481488 71481849 -23790802 - ORR1B2 LTR MaLR 0 367 2 1 1130 720 189 5 155 chr17 71481849 71481880 -23790771 + RSINE1 SINE B4 142 164 -1 1 1130 25 51 0 0 chr17 71481974 71482013 -23790638 + AT_rich Low_complexity Low_complexity 1 39 0 1 1130 292 320 55 0 chr17 71482211 71482339 -23790312 + L1M4b LINE L1 2325 2459 -4875 1 1130 364 295 35 35 chr17 71483447 71483563 -23789088 - B4A SINE B4 -176 116 1 1 1130 318 338 0 0 chr17 71483637 71483717 -23788934 + ID4_ SINE ID 3 82 -1 1 1130 719 189 15 77 chr17 71485052 71485247 -23787404 + B3A SINE B2 13 195 -3 1 1130 2363 200 30 25 chr17 71486027 71486585 -23786066 - RMER15 LTR ERVL -4 571 11 1 1130 459 212 8 34 chr17 71486623 71486740 -23785911 + RSINE1 SINE B4 47 160 -5 1 1130 273 57 0 0 chr17 71486842 71486877 -23785774 + (CATA)n Simple_repeat Simple_repeat 4 38 0 1 1130 351 255 48 24 chr17 71486937 71487102 -23785549 + (CATA)n Simple_repeat Simple_repeat 1 169 0 1 1130 466 262 59 118 chr17 71487181 71487384 -23785267 + B3 SINE B2 21 211 -5 1 1130 396 0 0 0 chr17 71487932 71487976 -23784675 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1130 1223 22 0 0 chr17 71488161 71488299 -23784352 + B1_Mus1 SINE Alu 2 139 -9 1 1130 463 296 46 17 chr17 71488356 71488531 -23784120 + B3A SINE B2 3 182 -16 1 1130 729 110 0 0 chr17 71489070 71489179 -23783472 + (TA)n Simple_repeat Simple_repeat 2 110 0 1 1130 3945 90 67 34 chr17 71489222 71489808 -23782843 + RLTR1D LTR ERV1 1 605 0 1 1130 747 195 105 31 chr17 71489823 71490014 -23782637 + B3 SINE B2 1 205 -11 1 1130 683 232 43 0 chr17 71490052 71490190 -23782461 + B1_Mur1 SINE Alu 3 146 -3 1 1130 207 0 0 0 chr17 71490387 71490410 -23782241 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 1130 248 258 55 22 chr17 71490417 71490508 -23782143 - B3A SINE B2 -38 160 67 1 1130 1676 195 48 23 chr17 71490517 71490915 -23781736 + MTD LTR MaLR 12 419 0 1 1130 253 162 241 36 chr17 71490915 71490997 -23781654 - B3 SINE B2 -117 99 1 1 1130 632 119 8 0 chr17 71491126 71491244 -23781407 + (CA)n Simple_repeat Simple_repeat 1 119 0 1 1130 1139 207 32 5 chr17 71491348 71491566 -23781085 + URR1A DNA MER1_type 3 226 0 1 1130 247 317 0 0 chr17 71491895 71491977 -23780674 + B4 SINE B4 4 85 -207 1 1130 317 153 102 0 chr17 71492003 71492101 -23780550 + GA-rich Low_complexity Low_complexity 1 108 0 1 1130 728 289 5 5 chr17 71492103 71492294 -23780357 + B4 SINE B4 95 285 -7 1 1130 490 297 87 0 chr17 71492704 71492842 -23779809 + RSINE1 SINE B4 3 152 -13 1 1130 385 254 107 0 chr17 71493522 71493644 -23779007 - B1F SINE Alu -5 144 10 1 1130 555 263 97 55 chr17 71494002 71494347 -23778304 - MTEb LTR MaLR -17 362 6 1 1130 620 177 131 0 chr17 71494534 71494664 -23777987 + B1F1 SINE Alu 1 147 -2 1 1130 388 290 0 36 chr17 71494713 71494824 -23777827 + RSINE1 SINE B4 3 109 -56 1 1130 7153 85 6 1 chr17 71494988 71495969 -23776682 - Lx3_Mus LINE L1 0 7009 6024 1 1130 513 0 0 0 chr17 71496017 71496074 -23776577 + (TTCC)n Simple_repeat Simple_repeat 1 57 0 1 1130 1542 121 41 34 chr17 71496085 71496376 -23776275 - Lx LINE L1 0 6654 6362 1 1130 214 117 16 32 chr17 71496376 71496438 -23776213 + T-rich Low_complexity Low_complexity 4 64 0 1 1130 921 76 15 0 chr17 71496445 71496576 -23776075 - B1_Mus1 SINE Alu -1 147 15 1 1130 1521 98 98 37 chr17 71496576 71496821 -23775830 - Lx LINE L1 -279 6375 6116 1 1130 19058 138 20 15 chr17 71496812 71499994 -23772657 - L1_Mur1 LINE L1 -309 5577 2382 1 1130 7292 63 16 14 chr17 71500000 71501031 -23771620 - MusHAL1 LINE L1 -1544 1168 135 1 1130 4515 94 53 18 chr17 71501028 71501707 -23770944 - L1VL2 LINE L1 -5366 969 267 2 1130 578 210 24 0 chr17 71501755 71501879 -23770772 + B1F2 SINE Alu 23 149 0 3 1130 441 0 0 0 chr17 71502515 71502564 -23770087 + (GTTTG)n Simple_repeat Simple_repeat 2 50 0 4 1130 308 330 75 0 chr17 71502574 71502668 -23769983 - ID_B1 SINE B4 -39 185 85 5 1130 218 330 64 0 chr17 71502844 71502953 -23769698 + ID_B1 SINE B4 93 208 -16 6 1130 382 239 22 11 chr17 71503058 71503147 -23769504 + B4A SINE B4 4 93 -199 7 1130 21 0 0 0 chr17 71503264 71503285 -23769366 + AT_rich Low_complexity Low_complexity 1 21 0 8 1130 25 31 0 0 chr17 71503628 71503660 -23768991 + AT_rich Low_complexity Low_complexity 1 32 0 9 1130 223 72 0 45 chr17 71505320 71505364 -23767287 + (CAA)n Simple_repeat Simple_repeat 1 42 0 1 1130 379 280 74 9 chr17 71505367 71505475 -23767176 + B4A SINE B4 100 214 -78 7 1130 342 0 0 0 chr17 71505478 71505516 -23767135 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 1 1130 1699 0 0 0 chr17 71506021 71506206 -23766445 - L1Md_F2 LINE L1 -669 5913 5729 1 1130 5897 31 3 4 chr17 71506206 71506895 -23765756 + L1Md_F2 LINE L1 5881 6568 -14 1 1130 771 217 227 68 chr17 71506942 71507264 -23765387 - MTE2a LTR MaLR -6 373 1 1 1130 207 0 0 0 chr17 71507652 71507675 -23764976 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1130 680 253 62 118 chr17 71507892 71508232 -23764419 + MER44A DNA MER2_type 6 326 -13 1 1130 497 331 0 0 chr17 71509569 71509699 -23762952 + RSINE1 SINE B4 13 142 -23 1 1130 294 284 80 0 chr17 71509800 71509888 -23762763 + B1F SINE Alu 4 98 -51 1 1130 1827 135 7 128 chr17 71510028 71510436 -23762215 + ORR1B2 LTR MaLR 1 359 -8 1 1130 321 204 44 13 chr17 71510946 71511105 -23761546 + (CA)n Simple_repeat Simple_repeat 2 165 0 1 1130 437 111 35 140 chr17 71511704 71511904 -23760747 + (CTATA)n Simple_repeat Simple_repeat 2 180 0 2 1130 379 187 75 46 chr17 71511916 71512090 -23760561 + (CTATA)n Simple_repeat Simple_repeat 2 180 0 2 1130 743 201 35 7 chr17 71512406 71512551 -23760100 + B1F2 SINE Alu 1 149 0 2 1130 199 54 0 51 chr17 71512551 71512590 -23760061 + (TAAAAA)n Simple_repeat Simple_repeat 3 39 0 2 1130 1036 240 127 8 chr17 71512663 71512915 -23759736 - B4A SINE B4 -4 288 7 2 1130 225 224 58 23 chr17 71513238 71513412 -23759239 + (TA)n Simple_repeat Simple_repeat 1 180 0 2 1130 303 140 0 0 chr17 71513645 71513695 -23758956 + (T)n Simple_repeat Simple_repeat 1 50 0 2 1130 312 94 0 0 chr17 71513730 71513783 -23758868 + (T)n Simple_repeat Simple_repeat 1 53 0 2 1130 285 274 35 12 chr17 71513835 71513920 -23758731 - B1F SINE Alu -62 87 1 2 1130 378 200 214 35 chr17 71513962 71514107 -23758544 + B4A SINE B4 57 227 -65 2 1130 210 274 0 19 chr17 71514137 71514189 -23758462 + (CATA)n Simple_repeat Simple_repeat 3 53 0 2 1130 22 70 0 0 chr17 71514863 71514906 -23757745 + AT_rich Low_complexity Low_complexity 1 43 0 2 1130 438 276 76 12 chr17 71515044 71515216 -23757435 + B3A SINE B2 15 197 -1 3 1130 359 251 201 27 chr17 71515343 71515527 -23757124 - B3 SINE B2 0 216 1 3 1130 738 259 28 17 chr17 71515617 71515854 -23756797 - Lx7 LINE L1 -1885 5811 5533 3 1130 248 0 0 30 chr17 71515855 71515888 -23756763 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 3 1130 270 0 0 0 chr17 71516388 71516418 -23756233 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1130 228 195 58 0 chr17 71516589 71516676 -23755975 + (TATAA)n Simple_repeat Simple_repeat 5 96 0 3 1130 560 159 38 6 chr17 71517069 71517227 -23755424 + (TG)n Simple_repeat Simple_repeat 2 164 0 3 1130 342 183 0 0 chr17 71518112 71518183 -23754468 + CT-rich Low_complexity Low_complexity 2 72 0 3 1130 1592 219 68 18 chr17 71519718 71520100 -23752551 - MTD LTR MaLR 0 419 19 3 1130 252 253 23 46 chr17 71521335 71521422 -23751229 + PB1D10 SINE Alu 26 110 -7 3 1130 885 238 10 24 chr17 71521440 71521647 -23751004 + B3 SINE B2 8 211 -5 4 1130 22 0 0 0 chr17 71521651 71521673 -23750978 + AT_rich Low_complexity Low_complexity 1 22 0 4 1130 192 40 0 0 chr17 71521941 71521966 -23750685 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 1130 285 281 122 11 chr17 71522220 71522310 -23750341 - ID_B1 SINE B4 -23 201 102 4 1130 943 224 43 30 chr17 71522767 71522997 -23749654 - ORR1D1 LTR MaLR -141 233 1 4 1130 351 259 80 44 chr17 71523538 71523651 -23749000 - B1F SINE Alu -15 134 18 4 1130 711 278 51 15 chr17 71523551 71523748 -23748903 - ID_B1 SINE B4 -20 204 1 4 1130 465 278 0 9 chr17 71524096 71524212 -23748439 + PB1D10 SINE Alu 1 115 -2 4 1130 538 299 118 43 chr17 71525408 71525831 -23746820 - L1M5 LINE L1 -2232 3914 3460 4 1130 28 48 0 0 chr17 71526269 71526311 -23746340 + AT_rich Low_complexity Low_complexity 1 42 0 4 1130 216 0 0 0 chr17 71527236 71527260 -23745391 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 5 1130 508 290 93 30 chr17 71527571 71527924 -23744727 + L1MA5 LINE L1 5914 6296 -1 5 1130 313 259 150 87 chr17 71528271 71528444 -23744207 - MamGypLTR1b LTR Gypsy -588 194 9 5 1130 216 260 0 20 chr17 71529955 71530006 -23742645 + CT-rich Low_complexity Low_complexity 3 52 0 5 1130 1079 125 6 0 chr17 71530011 71530187 -23742464 + MT2B LTR ERVL 346 522 -79 5 1130 323 336 45 15 chr17 71530283 71530416 -23742235 - ORR1E LTR MaLR -168 191 55 5 1130 974 179 4 36 chr17 71530419 71530675 -23741976 + Lx7 LINE L1 5562 5806 -1890 5 1130 268 280 0 0 chr17 71530676 71530751 -23741900 - RLTR24 LTR ERV1 -454 75 1 5 1130 2220 194 80 15 chr17 71530751 71531300 -23741351 + Lx9 LINE L1 7060 7644 0 5 1130 186 118 0 0 chr17 71531305 71531339 -23741312 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 5 1130 22 0 0 0 chr17 71532831 71532853 -23739798 + GC_rich Low_complexity Low_complexity 1 22 0 6 1130 219 69 0 0 chr17 71532911 71532940 -23739711 + (CCG)n Simple_repeat Simple_repeat 3 31 0 6 1130 26 88 0 0 chr17 71533233 71533301 -23739350 + GC_rich Low_complexity Low_complexity 1 68 0 6 1130 219 69 0 0 chr17 71533363 71533392 -23739259 + (CCG)n Simple_repeat Simple_repeat 2 30 0 6 1130 1484 70 16 0 chr17 71535140 71535325 -23737326 + B2_Mm2 SINE B2 1 188 -7 6 1130 482 250 10 0 chr17 71535447 71535547 -23737104 - ID_B1 SINE B4 -123 101 1 6 1130 386 327 52 17 chr17 71535631 71535805 -23736846 - B4A SINE B4 0 292 113 6 1130 244 269 51 13 chr17 71535788 71535867 -23736784 - B3A SINE B2 -114 84 3 6 1130 295 211 27 96 chr17 71536162 71536278 -23736373 + PB1D7 SINE Alu 11 120 0 6 1130 367 227 103 0 chr17 71536449 71536546 -23736105 - RSINE1 SINE B4 -54 111 5 6 1130 213 261 87 0 chr17 71538038 71538107 -23734544 - PB1D10 SINE Alu -6 111 37 7 1130 189 335 89 0 chr17 71538840 71538998 -23733653 - MIRb SINE MIR -12 256 85 7 1130 325 305 5 116 chr17 71540478 71540667 -23731984 + MTE2a LTR MaLR 11 178 -201 7 1130 417 219 89 8 chr17 71541462 71541586 -23731065 - L1MC3 LINE L1 -330 7455 7322 7 1130 371 144 207 25 chr17 71541740 71541861 -23730790 + Lx5 LINE L1 6905 7047 -3 7 1130 1094 221 5 0 chr17 71541874 71542078 -23730573 - B3 SINE B2 -11 205 1 7 1130 237 65 0 0 chr17 71542084 71542115 -23730536 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 7 1130 264 274 0 16 chr17 71542126 71542189 -23730462 - RSINE1 SINE B4 -21 144 83 7 1130 246 269 98 25 chr17 71542516 71542638 -23730013 - MLT1B LTR MaLR 0 390 260 7 1130 465 226 17 42 chr17 71542724 71542844 -23729807 - PB1D9 SINE Alu -2 118 2 7 1130 32 26 0 0 chr17 71542850 71542889 -23729762 + AT_rich Low_complexity Low_complexity 1 39 0 8 1130 270 0 0 0 chr17 71544047 71544077 -23728574 + (TG)n Simple_repeat Simple_repeat 2 31 0 8 1130 336 288 61 35 chr17 71544352 71544467 -23728184 + B3A SINE B2 37 154 -44 8 1130 23 0 0 0 chr17 71544467 71544490 -23728161 + AT_rich Low_complexity Low_complexity 1 23 0 8 1130 392 271 87 32 chr17 71545277 71545403 -23727248 + B1F1 SINE Alu 8 140 -9 8 1130 290 302 75 8 chr17 71545459 71545516 -23727135 + MER20 DNA MER1_type 3 66 -153 8 1130 306 0 0 0 chr17 71545516 71545550 -23727101 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 8 1130 290 304 70 9 chr17 71545550 71545620 -23727031 + MER20 DNA MER1_type 67 137 -646 8 1130 1121 69 14 0 chr17 71545710 71545854 -23726797 + B1_Mus2 SINE Alu 2 147 0 8 1130 189 0 0 0 chr17 71545854 71545875 -23726776 + (A)n Simple_repeat Simple_repeat 1 21 0 8 1130 1399 180 218 156 chr17 71546318 71546772 -23725879 + MT2A LTR ERVL 1 465 -68 8 1130 465 99 0 0 chr17 71546772 71546853 -23725798 + (TA)n Simple_repeat Simple_repeat 1 81 0 9 1130 1399 180 218 156 chr17 71546853 71546898 -23725753 + MT2A LTR ERVL 466 531 -2 8 1130 328 236 156 84 chr17 71547000 71547263 -23725388 + B4 SINE B4 2 283 -9 9 1130 560 233 26 39 chr17 71547525 71547681 -23724970 + B3A SINE B2 2 155 -43 9 1130 299 264 92 0 chr17 71547785 71547872 -23724779 - PB1 SINE Alu -32 95 1 9 1130 246 32 0 0 chr17 71547959 71547990 -23724661 + (T)n Simple_repeat Simple_repeat 1 31 0 9 1130 910 278 119 35 chr17 71548011 71548499 -23724152 - L1MB4 LINE L1 -339 5841 5313 9 1130 349 301 68 0 chr17 71548549 71548652 -23723999 - RSINE1 SINE B4 -52 113 4 9 1130 407 180 148 21 chr17 71548662 71548804 -23723847 - L1MB4 LINE L1 -842 5304 5145 9 1130 715 226 14 7 chr17 71548857 71549004 -23723647 - B3 SINE B2 -68 148 1 9 1130 3037 195 79 59 chr17 71549452 71550660 -23721991 + RMER1B Other Other 26 1066 0 9 1130 339 231 157 0 chr17 71550841 71550949 -23721702 - B1F SINE Alu -13 136 12 9 1130 259 244 77 0 chr17 71550982 71551060 -23721591 + 7SLRNA srpRNA srpRNA 1 84 -230 1 1130 198 0 0 0 chr17 71551181 71551203 -23721448 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 1130 180 214 0 97 chr17 71551882 71551944 -23720707 + MIR SINE MIR 86 141 -67 1 1130 570 230 74 0 chr17 71552441 71552576 -23720075 - RSINE1 SINE B4 -10 155 11 1 1130 514 257 161 25 chr17 71552852 71553095 -23719556 + B4A SINE B4 1 276 -16 1 1130 242 236 100 0 chr17 71553231 71553341 -23719310 - MER33 DNA MER1_type -185 139 19 1 1130 357 189 0 152 chr17 71554932 71555057 -23717594 - PB1D10 SINE Alu -2 115 10 1 1130 356 224 45 45 chr17 71556659 71556748 -23715903 + PB1D10 SINE Alu 29 117 0 1 1130 401 54 18 0 chr17 71557287 71557343 -23715308 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1130 481 249 160 28 chr17 71557366 71557634 -23715017 - L1MC4a LINE L1 -261 7734 7404 1 1130 1247 70 94 0 chr17 71558260 71558431 -23714220 - B2_Mm2 SINE B2 -7 188 2 1 1130 255 300 79 10 chr17 71558432 71558533 -23714118 - B2_Mm2 SINE B2 -105 111 4 1 1130 927 162 0 0 chr17 71558934 71559070 -23713581 - B1_Mur3 SINE Alu -9 140 5 1 1130 219 186 0 0 chr17 71559089 71559132 -23713519 + CT-rich Low_complexity Low_complexity 1 43 0 1 1130 463 282 88 71 chr17 71559777 71560017 -23712634 - MLT1A LTR MaLR -130 244 1 1 1130 399 257 231 34 chr17 71560069 71560186 -23712465 + B1_Mur3 SINE Alu 2 141 -8 1 1130 29 0 0 0 chr17 71560374 71560403 -23712248 + AT_rich Low_complexity Low_complexity 1 29 0 1 1130 2208 54 7 11 chr17 71560406 71560688 -23711963 - L1_Mus1 LINE L1 -2 6565 6285 1 1130 22 0 0 0 chr17 71560941 71560963 -23711688 + AT_rich Low_complexity Low_complexity 1 22 0 1 1130 229 200 0 74 chr17 71561325 71561379 -23711272 + L1MD1 LINE L1 5378 5427 -747 1 1130 992 262 102 58 chr17 71561420 71561945 -23710706 + L1MD1 LINE L1 5508 6061 -181 1 1130 936 134 0 0 chr17 71561981 71562115 -23710536 - B1_Mus1 SINE Alu -13 135 2 1 1130 576 216 26 0 chr17 71562385 71562511 -23710140 + B1_Mur1 SINE Alu 21 149 0 1 1130 352 283 87 0 chr17 71562656 71562748 -23709903 + PB1D10 SINE Alu 2 101 -16 1 1130 673 225 36 7 chr17 71562761 71562900 -23709751 + B1_Mur1 SINE Alu 2 144 -5 1 1130 259 274 198 16 chr17 71564794 71564920 -23707731 + RSINE1 SINE B4 3 151 -14 1 1130 310 186 83 56 chr17 71565023 71565131 -23707520 + ID_B1 SINE B4 99 209 -15 1 1131 226 294 160 35 chr17 71566687 71566856 -23705795 - MLT1K LTR MaLR -29 566 377 1 1131 1278 172 157 4 chr17 71567303 71567583 -23705068 - ORR1D1 LTR MaLR 0 374 52 1 1131 285 29 0 0 chr17 71567674 71567708 -23704943 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1131 683 152 0 0 chr17 71567708 71567813 -23704838 - B1_Mus1 SINE Alu -9 139 35 1 1131 286 309 89 86 chr17 71567742 71568011 -23704640 - MARNA DNA Mariner -156 430 161 1 1131 864 216 26 36 chr17 71568140 71568332 -23704319 - B3A SINE B2 0 198 9 1 1131 382 312 95 21 chr17 71568525 71568715 -23703936 + B4A SINE B4 89 292 0 1 1131 271 250 0 18 chr17 71568866 71568923 -23703728 + B4 SINE B4 20 75 -217 1 1131 423 283 48 28 chr17 71569010 71569216 -23703435 - L1MD3 LINE L1 -86 7909 7646 1 1131 340 38 57 0 chr17 71569352 71569405 -23703246 + (CATA)n Simple_repeat Simple_repeat 1 56 0 1 1131 242 188 31 0 chr17 71569405 71569509 -23703142 + (TA)n Simple_repeat Simple_repeat 1 107 0 1 1131 277 294 63 8 chr17 71569550 71569677 -23702974 - Tigger6a DNA MER2_type -551 532 399 1 1131 521 138 73 9 chr17 71569677 71569787 -23702864 - Lx9 LINE L1 -12 7632 7516 1 1131 441 54 0 0 chr17 71569789 71569845 -23702806 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1131 1561 206 131 11 chr17 71569848 71570291 -23702360 - Lx9 LINE L1 -172 7472 6977 1 1131 510 308 71 102 chr17 71570329 71570439 -23702212 - Tigger6a DNA MER2_type -651 432 331 1 1131 878 262 51 18 chr17 71570439 71570715 -23701936 + B4 SINE B4 2 286 -6 1 1131 510 308 71 102 chr17 71570715 71570958 -23701693 - Tigger6a DNA MER2_type -753 330 90 1 1131 359 229 136 45 chr17 71571045 71571155 -23701496 + PB1D7 SINE Alu 1 120 0 1 1131 271 285 78 90 chr17 71571831 71571997 -23700654 + RSINE1 SINE B4 2 165 0 1 1131 285 151 73 36 chr17 71572711 71572766 -23699885 + B1_Mur2 SINE Alu 91 147 -2 1 1131 22 0 0 0 chr17 71572837 71572859 -23699792 + AT_rich Low_complexity Low_complexity 1 22 0 1 1131 944 216 310 12 chr17 71573064 71573387 -23699264 - MTD LTR MaLR 0 419 1 1 1131 234 0 0 0 chr17 71574845 71574871 -23697780 + (TC)n Simple_repeat Simple_repeat 1 26 0 1 1131 3139 27 59 0 chr17 71575161 71575535 -23697116 + MTA_Mm LTR MaLR 1 396 0 1 1131 1826 9 5 9 chr17 71575813 71576035 -23696616 + MusHAL1 LINE L1 2435 2655 -57 1 1131 31 0 0 0 chr17 71576460 71576491 -23696160 + AT_rich Low_complexity Low_complexity 1 31 0 1 1131 458 73 0 5 chr17 71576503 71576568 -23696083 - B2_Mm2 SINE B2 -107 109 47 1 1131 1266 122 0 0 chr17 71576581 71576761 -23695890 - B2_Mm2 SINE B2 -14 181 2 1 1131 379 212 193 137 chr17 71579107 71579304 -23693347 - B3 SINE B2 -8 208 1 1 1131 221 296 27 53 chr17 71580010 71580085 -23692566 + ID SINE ID 3 75 -149 1 1131 718 170 223 23 chr17 71581451 71581626 -23691025 + B3 SINE B2 7 216 0 1 1131 899 122 14 0 chr17 71581829 71581977 -23690674 + (TATG)n Simple_repeat Simple_repeat 2 151 0 1 1131 243 0 0 0 chr17 71582998 71583025 -23689626 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 1 1131 465 34 0 0 chr17 71583481 71583540 -23689111 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 1131 372 269 98 15 chr17 71583547 71583679 -23688972 - RSINE1 SINE B4 -13 152 10 1 1131 24 0 0 0 chr17 71584110 71584134 -23688517 + AT_rich Low_complexity Low_complexity 1 24 0 1 1131 1020 157 0 0 chr17 71584311 71584458 -23688193 + B1_Mus1 SINE Alu 1 147 -1 1 1131 204 143 0 28 chr17 71584459 71584495 -23688156 + GA-rich Low_complexity Low_complexity 2 36 0 1 1131 564 116 0 0 chr17 71584496 71584582 -23688069 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 1 1131 544 241 7 87 chr17 71584653 71584803 -23687848 + B1_Mur3 SINE Alu 7 144 -5 1 1131 230 268 161 0 chr17 71585507 71585563 -23687088 + ID4_ SINE ID 8 72 -11 1 1131 638 314 23 63 chr17 71586216 71586492 -23686159 + B4A SINE B4 5 272 -20 1 1131 522 46 0 0 chr17 71586492 71586557 -23686094 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 1131 638 314 23 63 chr17 71586557 71586579 -23686072 + B4A SINE B4 273 291 -1 1 1131 3555 182 86 21 chr17 71588788 71589547 -23683104 + RLTR25B LTR ERVK 55 862 -166 1 1131 261 104 125 0 chr17 71589609 71589657 -23682994 + U7 snRNA snRNA 8 61 -2 1 1131 803 219 84 99 chr17 71589754 71589888 -23682763 + RLTR25B LTR ERVK 757 889 -139 1 1131 330 26 0 0 chr17 71589888 71589927 -23682724 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1131 803 219 84 99 chr17 71589927 71590065 -23682586 + RLTR25B LTR ERVK 890 1024 -4 1 1131 186 295 98 28 chr17 71592151 71592294 -23680357 + MER5A DNA MER1_type 21 173 -16 1 1131 908 216 5 66 chr17 71594823 71595036 -23677615 - B3 SINE B2 -7 209 10 1 1131 371 319 0 42 chr17 71595047 71595165 -23677486 - PB1 SINE Alu -2 125 13 1 1131 1145 194 5 14 chr17 71595303 71595517 -23677134 - URR1A DNA MER1_type 0 226 15 1 1131 252 0 0 0 chr17 71595998 71596026 -23676625 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 1131 238 137 0 121 chr17 71597478 71597536 -23675115 + MT2B LTR ERVL 214 264 -337 1 1131 654 81 0 0 chr17 71597485 71597571 -23675080 + B1_Mus2 SINE Alu 62 147 0 1 1131 24 0 0 0 chr17 71604274 71604298 -23668353 + AT_rich Low_complexity Low_complexity 1 24 0 1 1131 357 62 0 0 chr17 71604757 71604805 -23667846 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1131 668 99 7 47 chr17 71604805 71604954 -23667697 + GA-rich Low_complexity Low_complexity 2 144 0 1 1131 324 304 124 74 chr17 71607112 71607354 -23665297 + HAL1 LINE L1 1705 1958 -549 1 1131 416 337 25 61 chr17 71607453 71607649 -23665002 - B4A SINE B4 0 292 104 1 1131 632 176 125 37 chr17 71607758 71607894 -23664757 + B1_Mur2 SINE Alu 1 148 -1 1 1131 394 284 10 10 chr17 71607996 71608099 -23664552 + B4A SINE B4 8 110 -182 1 1131 257 245 18 125 chr17 71608038 71608150 -23664501 + B3 SINE B2 114 213 -3 1 1131 597 206 175 6 chr17 71608154 71608285 -23664366 + B3 SINE B2 2 150 -66 1 1131 648 26 0 0 chr17 71608285 71608363 -23664288 + (TG)n Simple_repeat Simple_repeat 2 79 0 1 1131 597 206 175 6 chr17 71608363 71608402 -23664249 + B3 SINE B2 151 201 -15 1 1131 194 154 24 71 chr17 71608921 71608963 -23663688 + L2b LINE L2 3296 3335 -40 1 1131 560 159 11 43 chr17 71609505 71609689 -23662962 + GA-rich Low_complexity Low_complexity 2 179 0 1 1131 607 242 31 8 chr17 71609756 71609885 -23662766 + B1F SINE Alu 9 140 -9 1 1131 1987 124 74 59 chr17 71610382 71610786 -23661865 + RMER17C LTR ERVK 1 410 0 1 1131 207 174 0 42 chr17 71610786 71610825 -23661826 + polypurine Low_complexity Low_complexity 10 47 0 1 1131 463 281 118 38 chr17 71610831 71611042 -23661609 + B4A SINE B4 5 232 -60 1 1131 543 280 42 47 chr17 71611046 71611237 -23661414 + B3A SINE B2 9 198 0 1 1131 287 179 68 82 chr17 71611234 71611307 -23661344 + B4 SINE B4 218 289 -3 1 1131 577 247 66 7 chr17 71611477 71611616 -23661035 + B1F1 SINE Alu 3 149 0 1 1131 233 284 0 108 chr17 71611630 71611713 -23660938 + RSINE1 SINE B4 3 76 -89 1 1131 275 218 0 0 chr17 71611761 71611816 -23660835 + RSINE1 SINE B4 78 132 -33 1 1131 1498 259 109 20 chr17 71611866 71612371 -23660280 + RLTR20A1 LTR ERVK 1 550 -1 1 1131 198 0 0 0 chr17 71612372 71612394 -23660257 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 1 1131 232 85 0 92 chr17 71613504 71613544 -23659107 + T-rich Low_complexity Low_complexity 23 60 0 2 1131 1122 76 14 14 chr17 71613544 71613691 -23658960 - B1_Mus1 SINE Alu 0 148 2 2 1131 232 85 0 92 chr17 71613691 71613715 -23658936 + T-rich Low_complexity Low_complexity 3 22 0 2 1131 315 280 0 13 chr17 71613743 71613819 -23658832 - B3A SINE B2 -119 79 5 2 1131 898 242 73 36 chr17 71614727 71615057 -23657594 + RLTR15 LTR ERVK 1 342 -17 2 1131 386 260 49 0 chr17 71615921 71616015 -23656636 + B1F SINE Alu 1 99 -21 2 1131 386 69 17 0 chr17 71616015 71616073 -23656578 + (TGAA)n Simple_repeat Simple_repeat 2 60 0 2 1131 501 17 0 0 chr17 71616207 71616265 -23656386 + (TAG)n Simple_repeat Simple_repeat 1 58 0 2 1131 390 220 0 0 chr17 71616312 71616412 -23656239 + (TA)n Simple_repeat Simple_repeat 2 101 0 2 1131 212 262 15 15 chr17 71618292 71618358 -23654293 + GA-rich Low_complexity Low_complexity 5 70 0 2 1131 474 187 0 0 chr17 71618612 71618687 -23653964 + MTC LTR MaLR 4 78 -343 2 1131 5097 147 24 26 chr17 71618688 71619621 -23653030 + L1_Mur3 LINE L1 3968 4898 -982 2 1131 1535 213 150 37 chr17 71619628 71620087 -23652564 + RLTR11A LTR ERVK 1 511 -17 2 1131 359 225 34 0 chr17 71620119 71620208 -23652443 + Lx6 LINE L1 7003 7094 -366 2 1131 1620 160 37 45 chr17 71620202 71620559 -23652092 + L1_Mur3 LINE L1 4939 5332 -980 2 1131 1063 247 87 99 chr17 71620576 71620989 -23651662 + Lx6 LINE L1 7042 7449 -11 2 1131 1730 139 123 6 chr17 71620992 71621310 -23651341 + MTC LTR MaLR 67 421 0 2 1131 484 348 0 6 chr17 71621926 71622085 -23650566 + (TG)n Simple_repeat Simple_repeat 1 158 0 2 1131 362 281 128 35 chr17 71622085 71622288 -23650363 + RMER12 LTR ERVK 767 988 -334 2 1131 189 264 0 0 chr17 71622288 71622360 -23650291 + (TG)n Simple_repeat Simple_repeat 2 73 0 2 1131 641 235 190 5 chr17 71622365 71622549 -23650102 - ID_B1 SINE B4 -4 220 3 2 1131 284 314 134 14 chr17 71624749 71624891 -23647760 + MIRb SINE MIR 27 185 -83 2 1131 790 139 0 43 chr17 71624945 71625133 -23647518 + (CATAT)n Simple_repeat Simple_repeat 1 180 0 2 1131 1213 61 0 13 chr17 71625344 71625493 -23647158 + B1_Mus2 SINE Alu 1 147 0 2 1131 3680 50 0 0 chr17 71625624 71626063 -23646588 - L1Md_T LINE L1 0 6582 6144 2 1131 943 128 28 7 chr17 71626568 71626710 -23645941 + B1_Mur4 SINE Alu 2 146 -4 2 1131 234 62 0 0 chr17 71626710 71626742 -23645909 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 2 1131 786 148 78 8 chr17 71626805 71626934 -23645717 + B1_Mur2 SINE Alu 3 140 -9 2 1131 227 277 0 24 chr17 71627247 71627332 -23645319 + HAL1b LINE L1 1070 1152 -857 2 1131 605 105 11 0 chr17 71627337 71627432 -23645219 + (CATA)n Simple_repeat Simple_repeat 2 97 0 2 1131 707 249 91 24 chr17 71627475 71627685 -23644966 + ID_B1 SINE B4 1 224 0 2 1131 327 300 0 0 chr17 71628155 71628225 -23644426 + ID4_ SINE ID 2 71 -12 2 1131 610 213 59 72 chr17 71628669 71628821 -23643830 + B3A SINE B2 2 151 -47 2 1131 423 0 0 0 chr17 71628830 71628877 -23643774 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 1131 629 25 13 0 chr17 71628877 71628956 -23643695 + (GA)n Simple_repeat Simple_repeat 1 80 0 2 1131 726 241 66 0 chr17 71628965 71629193 -23643458 + L1MA9 LINE L1 5832 6074 -238 2 1131 26 0 0 0 chr17 71629310 71629336 -23643315 + AT_rich Low_complexity Low_complexity 1 26 0 2 1131 385 193 174 35 chr17 71629731 71629817 -23642834 - B1F1 SINE Alu -48 101 1 2 1131 286 277 224 6 chr17 71629817 71629887 -23642764 - B4 SINE B4 -102 190 1 2 1131 430 219 159 68 chr17 71630267 71630443 -23642208 + ORR1E LTR MaLR 1 192 -167 2 1131 2268 167 106 94 chr17 71630449 71630534 -23642117 + RLTR20B2 LTR ERVK 1 85 -475 2 1131 1375 69 25 41 chr17 71630534 71630731 -23641920 + B2_Mm2 SINE B2 2 195 0 2 1131 2268 167 106 94 chr17 71630731 71631105 -23641546 + RLTR20B2 LTR ERVK 86 445 -115 2 1131 318 26 0 0 chr17 71631105 71631144 -23641507 + (TC)n Simple_repeat Simple_repeat 2 40 0 2 1131 1272 82 0 0 chr17 71631144 71631387 -23641264 + (TG)n Simple_repeat Simple_repeat 1 243 0 2 1131 2268 167 106 94 chr17 71631387 71631474 -23641177 + RLTR20B2 LTR ERVK 446 554 -6 2 1131 254 260 0 14 chr17 71631546 71631616 -23641035 + ORR1E LTR MaLR 278 347 -32 2 1131 430 191 0 67 chr17 71631653 71631669 -23640982 - PB1D10 SINE Alu 0 117 105 2 1131 219 36 0 0 chr17 71631669 71631697 -23640954 + (TTGG)n Simple_repeat Simple_repeat 3 30 0 2 1131 430 191 0 67 chr17 71631697 71631770 -23640881 - PB1D10 SINE Alu -13 104 34 2 1131 270 294 84 71 chr17 71632123 71632277 -23640374 + ORR1D1 LTR MaLR 26 181 -193 2 1131 543 31 0 0 chr17 71632465 71632530 -23640121 + (GGAA)n Simple_repeat Simple_repeat 4 68 0 2 1131 306 331 59 6 chr17 71632675 71632874 -23639777 - Tigger12c DNA MER2_type -293 441 230 2 1131 217 299 44 44 chr17 71633090 71633181 -23639470 - MER5B DNA MER1_type -55 123 33 2 1131 301 286 101 54 chr17 71633281 71633429 -23639222 + RSINE1 SINE B4 4 158 -7 2 1131 245 254 11 17 chr17 71633466 71633646 -23639005 + (CA)n Simple_repeat Simple_repeat 1 179 0 2 1131 200 256 0 58 chr17 71633659 71633746 -23638905 + (CATA)n Simple_repeat Simple_repeat 2 83 0 2 1131 252 277 0 0 chr17 71633750 71633927 -23638724 + (CA)n Simple_repeat Simple_repeat 2 178 0 2 1131 213 296 145 46 chr17 71633983 71634114 -23638537 - MIRm SINE MIR -125 151 8 2 1131 360 0 0 0 chr17 71634994 71635034 -23637617 + (CATAA)n Simple_repeat Simple_repeat 3 42 0 2 1131 727 278 97 15 chr17 71635605 71635945 -23636706 - L1MC1 LINE L1 -139 6194 5827 2 1131 848 184 0 14 chr17 71636011 71636154 -23636497 - B1_Mus2 SINE Alu -5 142 2 2 1131 22 56 0 0 chr17 71636485 71636521 -23636130 + AT_rich Low_complexity Low_complexity 1 36 0 2 1131 310 72 0 23 chr17 71636842 71636876 -23635775 + HAL1-3A_ME LINE L1 1977 2010 -848 2 1131 450 0 0 0 chr17 71636876 71636926 -23635725 + (CCA)n Simple_repeat Simple_repeat 1 50 0 2 1131 429 277 62 17 chr17 71637183 71637368 -23635283 - B4 SINE B4 -98 194 3 2 1131 1242 48 0 0 chr17 71638041 71638188 -23634463 - B1_Mus1 SINE Alu 0 148 2 2 1131 551 180 7 0 chr17 71639429 71639579 -23633072 + (TG)n Simple_repeat Simple_repeat 1 151 0 2 1131 459 290 41 88 chr17 71639585 71639615 -23633036 - RSINE1 SINE B4 0 165 142 2 1131 237 119 0 0 chr17 71639615 71639657 -23632994 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1131 459 290 41 88 chr17 71639657 71639796 -23632855 - RSINE1 SINE B4 -24 141 4 2 1131 207 0 0 0 chr17 71639849 71639872 -23632779 + (CAAAA)n Simple_repeat Simple_repeat 5 27 0 2 1131 3752 109 32 2 chr17 71640297 71640831 -23631820 + Lx2 LINE L1 6448 6997 0 2 1131 700 340 74 56 chr17 71641031 71641315 -23631336 + B4A SINE B4 1 289 -3 2 1131 314 260 72 10 chr17 71641976 71642073 -23630578 + PB1D10 SINE Alu 1 103 -14 2 1131 424 291 86 0 chr17 71642289 71642406 -23630245 - B1F2 SINE Alu -18 131 5 2 1131 588 293 96 44 chr17 71642630 71642901 -23629750 + MLT1B LTR MaLR 1 285 -105 2 1131 1896 208 3 23 chr17 71643036 71643385 -23629266 + RLTR21 LTR ERVK 5 346 -1226 2 1131 743 194 0 4 chr17 71643398 71643678 -23628973 + (TG)n Simple_repeat Simple_repeat 1 278 0 2 1131 477 284 73 30 chr17 71643709 71643941 -23628710 + RMER12B LTR ERVK 1161 1402 -2 2 1131 197 264 94 119 chr17 71644148 71644307 -23628344 + L2c LINE L2 3232 3386 -1 2 1131 235 324 31 71 chr17 71644553 71644779 -23627872 + L1ME2 LINE L1 5771 5987 -177 2 1131 760 193 114 0 chr17 71644844 71645010 -23627641 - MTC LTR MaLR -236 185 1 2 1131 3749 179 122 145 chr17 71645018 71646236 -23626415 - MTC-int LTR MaLR -20 1238 50 2 1131 522 99 0 0 chr17 71646236 71646327 -23626324 + (A)n Simple_repeat Simple_repeat 1 91 0 2 1131 263 135 75 19 chr17 71646327 71646380 -23626271 - MTC-int LTR MaLR -1201 57 2 2 1131 2260 159 43 40 chr17 71646380 71646800 -23625851 - MTC LTR MaLR 0 421 1 2 1131 546 257 0 9 chr17 71646964 71647074 -23625577 - B1_Mur2 SINE Alu -28 121 13 2 1131 214 306 149 23 chr17 71646998 71647085 -23625566 - B4A SINE B4 -116 176 79 2 1131 2783 238 77 33 chr17 71647345 71648113 -23624538 - Lx4B LINE L1 -4 7054 6253 2 1131 1148 191 0 31 chr17 71648250 71648472 -23624179 + B3 SINE B2 2 216 0 2 1131 28 29 0 0 chr17 71648472 71648507 -23624144 + AT_rich Low_complexity Low_complexity 1 35 0 2 1131 268 349 0 0 chr17 71648617 71648700 -23623951 + ID4_ SINE ID 1 83 0 2 1131 407 235 49 0 chr17 71648810 71648912 -23623739 + PB1D10 SINE Alu 5 111 -6 2 1131 873 139 7 68 chr17 71648926 71649073 -23623578 + B1_Mus1 SINE Alu 1 138 -10 2 1131 252 0 0 0 chr17 71649073 71649101 -23623550 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 1131 234 159 22 43 chr17 71649158 71649204 -23623447 + RSINE1 SINE B4 99 143 -22 2 1131 877 94 0 14 chr17 71649655 71649795 -23622856 + (GGGA)n Simple_repeat Simple_repeat 1 138 0 2 1131 198 0 0 0 chr17 71650123 71650145 -23622506 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 2 1131 246 268 0 99 chr17 71650191 71650282 -23622369 - MT2B LTR ERVL -324 277 196 2 1131 350 210 0 24 chr17 71650204 71650287 -23622364 - B1_Mur2 SINE Alu -35 114 34 2 1131 207 0 0 0 chr17 71651343 71651366 -23621285 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1131 545 148 9 5 chr17 71651366 71651471 -23621180 - B1_Mus2 SINE Alu -9 140 37 2 1131 939 127 0 62 chr17 71652082 71652242 -23620409 - B1_Mur4 SINE Alu 0 150 1 2 1131 284 70 23 0 chr17 71653088 71653131 -23619520 + (TTTTC)n Simple_repeat Simple_repeat 2 45 0 2 1131 270 81 0 0 chr17 71653201 71653238 -23619413 + (GGGAA)n Simple_repeat Simple_repeat 5 41 0 2 1131 340 111 32 0 chr17 71653430 71653493 -23619158 + (TCTCCC)n Simple_repeat Simple_repeat 6 70 0 2 1131 220 224 0 49 chr17 71653550 71653611 -23619040 + PB1D10 SINE Alu 37 94 -23 2 1131 893 262 49 10 chr17 71653639 71653843 -23618808 + B3 SINE B2 5 216 0 2 1131 359 250 17 96 chr17 71653921 71654036 -23618615 + RSINE1 SINE B4 35 140 -25 2 1131 515 318 40 20 chr17 71654750 71654952 -23617699 - B3 SINE B2 -6 210 5 3 1131 377 221 116 0 chr17 71654957 71655052 -23617599 - ID_B1 SINE B4 0 224 119 3 1131 361 252 33 90 chr17 71655565 71655687 -23616964 + PB1 SINE Alu 1 127 0 3 1131 337 287 0 18 chr17 71655690 71655800 -23616851 + PB1D10 SINE Alu 1 108 -9 3 1131 414 0 0 0 chr17 71655811 71655857 -23616794 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1131 355 202 9 9 chr17 71656527 71656632 -23616019 + (CA)n Simple_repeat Simple_repeat 2 106 0 3 1131 465 286 27 0 chr17 71656914 71657026 -23615625 - ID_B1 SINE B4 -100 124 10 3 1131 816 58 0 0 chr17 71657024 71657127 -23615524 - B1_Mus1 SINE Alu -44 104 2 3 1131 305 386 57 25 chr17 71657226 71657260 -23615391 + ID_B1 SINE B4 54 215 -9 3 1131 410 292 122 24 chr17 71657260 71657383 -23615268 + B1F SINE Alu 6 140 -9 3 1131 225 0 0 0 chr17 71657394 71657419 -23615232 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 3 1131 615 214 18 9 chr17 71657432 71657545 -23615106 + PB1D9 SINE Alu 3 116 -4 3 1131 349 133 27 0 chr17 71657567 71657642 -23615009 + (TATG)n Simple_repeat Simple_repeat 4 80 0 3 1131 337 315 8 45 chr17 71657645 71657778 -23614873 + (TG)n Simple_repeat Simple_repeat 2 129 0 3 1131 645 276 103 24 chr17 71657808 71658060 -23614591 - B4A SINE B4 -18 274 3 3 1131 22 35 0 0 chr17 71658067 71658096 -23614555 + AT_rich Low_complexity Low_complexity 1 29 0 3 1131 347 0 23 0 chr17 71659215 71659258 -23613393 + (GA)n Simple_repeat Simple_repeat 1 44 0 3 1131 22 0 0 0 chr17 71660648 71660670 -23611981 + GC_rich Low_complexity Low_complexity 1 22 0 3 1131 908 226 161 33 chr17 71660937 71661179 -23611472 + B4A SINE B4 12 284 -8 3 1131 198 207 0 0 chr17 71661271 71661329 -23611322 + CT-rich Low_complexity Low_complexity 1 58 0 3 1131 274 214 89 0 chr17 71661444 71661500 -23611151 + B1F1 SINE Alu 36 96 -53 3 1131 623 258 0 6 chr17 71662079 71662427 -23610224 + (TG)n Simple_repeat Simple_repeat 1 345 0 3 1131 663 236 90 0 chr17 71662482 71662626 -23610025 - B3A SINE B2 -41 157 1 3 1131 243 0 0 0 chr17 71662637 71662664 -23609987 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1131 714 169 32 8 chr17 71662664 71662779 -23609872 - B1_Mur2 SINE Alu -9 140 22 3 1131 301 252 39 108 chr17 71662690 71662819 -23609832 - MT2B LTR ERVL -337 264 145 3 1131 237 329 13 0 chr17 71662892 71662971 -23609680 + ID4_ SINE ID 4 83 0 3 1131 329 282 111 84 chr17 71663032 71663222 -23609429 + MER2 DNA MER2_type 1 195 -150 3 1131 484 322 40 11 chr17 71663213 71663389 -23609262 + MER2B DNA MER2_type 155 335 -1 3 1131 216 0 0 0 chr17 71663488 71663512 -23609139 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 1131 291 305 94 9 chr17 71663512 71663610 -23609041 - PB1D10 SINE Alu -9 108 1 3 1131 235 273 14 70 chr17 71664342 71664413 -23608238 + ID2 SINE ID 17 83 0 3 1131 1204 61 0 7 chr17 71664555 71664703 -23607948 - B1_Mus1 SINE Alu 0 148 2 3 1131 872 280 65 16 chr17 71664709 71665032 -23607619 + Lx8 LINE L1 7047 7385 -88 3 1131 294 273 36 9 chr17 71665068 71665179 -23607472 + (CATA)n Simple_repeat Simple_repeat 2 115 0 3 1131 1300 77 61 0 chr17 71665182 71665363 -23607288 - B2_Mm1a SINE B2 -1 192 1 3 1131 1095 101 6 72 chr17 71665402 71665583 -23607068 - B2_Mm1a SINE B2 -23 170 2 3 1131 1350 65 26 42 chr17 71665584 71665775 -23606876 - B2_Mm1a SINE B2 -5 188 1 3 1131 932 109 14 35 chr17 71665810 71665952 -23606699 - B1_Mus1 SINE Alu -8 140 2 3 1131 29 0 0 0 chr17 71665952 71665981 -23606670 + AT_rich Low_complexity Low_complexity 1 29 0 3 1131 348 43 0 0 chr17 71667058 71667104 -23605547 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1131 1160 273 10 46 chr17 71667125 71667354 -23605297 + B4A SINE B4 1 224 -68 3 1131 606 175 100 0 chr17 71667354 71667474 -23605177 + B1_Mur2 SINE Alu 3 134 -15 3 1131 198 0 0 0 chr17 71667477 71667499 -23605152 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 3 1131 1160 273 10 46 chr17 71667499 71667568 -23605083 + B4A SINE B4 225 292 0 3 1131 188 114 45 0 chr17 71667580 71667624 -23605027 + (CAGAGA)n Simple_repeat Simple_repeat 3 48 0 3 1131 396 254 56 102 chr17 71668350 71668547 -23604104 + MER82 DNA MER2_type 39 226 -427 3 1131 490 266 82 23 chr17 71668528 71668657 -23603994 + MTE2a LTR MaLR 5 172 -187 3 1131 1153 82 129 0 chr17 71668657 71668827 -23603824 - B2_Mm2 SINE B2 -3 192 1 3 1131 547 229 45 60 chr17 71668827 71669006 -23603645 + MTE2a LTR MaLR 173 365 -14 3 1131 2472 193 11 47 chr17 71669128 71669666 -23602985 + L1VL4 LINE L1 185 703 -5599 3 1131 1194 44 25 0 chr17 71669666 71669824 -23602827 + RLTR1B LTR ERV1 351 512 0 3 1131 1693 110 0 52 chr17 71669824 71670166 -23602485 + RLTR1B-int LTR ERV1 1 270 -3029 3 1131 1013 181 104 17 chr17 71670141 71670372 -23602279 + MMERGLN-int LTR ERV1 128 378 -7178 3 1131 20506 64 50 90 chr17 71670343 71673506 -23599145 + RLTR1B-int LTR ERV1 264 3299 0 3 1131 3216 51 12 2 chr17 71673506 71673938 -23598713 + RLTR1B LTR ERV1 1 436 -76 3 1131 27209 127 29 4 chr17 71673938 71679366 -23593285 + Lx LINE L1 1051 6603 -51 3 1131 2305 137 100 35 chr17 71679477 71679907 -23592744 - RMER6B LTR ERVK 0 461 4 3 1131 338 159 16 0 chr17 71680242 71680305 -23592346 + ID2 SINE ID 1 64 -19 3 1131 252 229 33 0 chr17 71680667 71680728 -23591923 - ID4_ SINE ID -2 81 19 3 1131 232 186 0 0 chr17 71680763 71680806 -23591845 - PB1 SINE Alu -3 124 82 3 1131 846 168 0 7 chr17 71680821 71680959 -23591692 + B1_Mur4 SINE Alu 1 137 -13 3 1131 762 225 292 65 chr17 71680961 71681423 -23591228 - RMER2 LTR ERV1 0 567 1 3 1131 333 305 112 14 chr17 71681490 71681633 -23591018 - B3A SINE B2 -26 172 16 3 1131 241 238 0 16 chr17 71681640 71681704 -23590947 - B1F2 SINE Alu -80 69 7 3 1131 301 238 43 100 chr17 71681998 71682138 -23590513 + MER94 DNA AcHobo 1 132 -2 3 1131 699 35 0 0 chr17 71682337 71682423 -23590228 + (GA)n Simple_repeat Simple_repeat 2 87 0 3 1131 380 267 38 9 chr17 71682434 71682540 -23590111 + PB1D10 SINE Alu 6 114 -3 3 1131 592 196 266 0 chr17 71683177 71683335 -23589316 + B3 SINE B2 2 201 -15 3 1131 218 32 32 0 chr17 71683336 71683367 -23589284 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 3 1131 214 328 15 0 chr17 71683553 71683620 -23589031 - ID4 SINE ID -15 68 1 3 1131 1179 75 0 0 chr17 71683650 71683796 -23588855 - B1_Mus2 SINE Alu 0 147 2 3 1131 22 0 0 0 chr17 71683825 71683847 -23588804 + AT_rich Low_complexity Low_complexity 1 22 0 3 1131 291 203 0 0 chr17 71683858 71683917 -23588734 + ID4 SINE ID 14 72 -11 3 1131 243 0 0 0 chr17 71683917 71683944 -23588707 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1131 548 101 0 11 chr17 71684129 71684219 -23588432 + (TATG)n Simple_repeat Simple_repeat 4 92 0 3 1131 243 330 35 26 chr17 71684238 71684353 -23588298 - B4A SINE B4 -6 286 171 3 1131 680 245 28 4 chr17 71684393 71684570 -23588081 - B3A SINE B2 -11 205 24 3 1131 362 250 0 10 chr17 71684913 71685010 -23587641 + BC1_Mm scRNA scRNA 9 104 -48 3 1131 1399 62 11 0 chr17 71685015 71685194 -23587457 + B2_Mm1t SINE B2 2 182 -11 3 1131 438 39 0 0 chr17 71685363 71685415 -23587236 + (GAA)n Simple_repeat Simple_repeat 3 54 0 3 1131 686 181 11 17 chr17 71685415 71685509 -23587142 + polypurine Low_complexity Low_complexity 2 95 0 3 1131 965 124 13 27 chr17 71685509 71685645 -23587006 + B1_Mus1 SINE Alu 2 139 -9 3 1131 198 0 0 0 chr17 71685645 71685667 -23586984 + (CAAAC)n Simple_repeat Simple_repeat 2 23 0 3 1131 965 124 13 27 chr17 71685667 71685679 -23586972 + B1_Mus1 SINE Alu 140 148 0 3 1131 686 181 11 17 chr17 71685679 71685764 -23586887 + polypurine Low_complexity Low_complexity 96 180 0 3 1131 247 193 0 34 chr17 71686078 71686123 -23586528 + B1_Mur1 SINE Alu 73 117 -32 3 1131 423 0 0 0 chr17 71686123 71686170 -23586481 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1131 247 193 0 34 chr17 71686170 71686183 -23586468 + B1_Mur1 SINE Alu 118 129 -20 3 1131 403 124 0 40 chr17 71686183 71686284 -23586367 + (CAGAGA)n Simple_repeat Simple_repeat 2 98 0 3 1131 623 197 134 0 chr17 71686396 71686523 -23586128 + B1_Mus1 SINE Alu 5 148 0 3 1131 534 212 18 0 chr17 71686626 71686739 -23585912 + RLTR19C LTR ERVK 1 115 -391 3 1131 301 265 50 30 chr17 71686755 71686856 -23585795 + B1F2 SINE Alu 15 117 -32 3 1131 324 250 98 75 chr17 71686910 71687116 -23585535 - MTD LTR MaLR -132 289 50 3 1131 399 280 47 0 chr17 71687547 71687654 -23584997 + B1F1 SINE Alu 6 117 -32 3 1131 315 0 0 0 chr17 71687655 71687690 -23584961 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 1131 600 151 0 0 chr17 71687882 71687975 -23584676 + B1_Mur3 SINE Alu 2 94 -55 3 1131 255 178 39 64 chr17 71688053 71688131 -23584520 + B1_Mus2 SINE Alu 72 147 0 3 1131 1065 166 72 0 chr17 71688162 71688355 -23584296 + B3 SINE B2 1 207 -9 3 1131 272 91 23 0 chr17 71688376 71688420 -23584231 + (TATG)n Simple_repeat Simple_repeat 1 45 0 3 1131 309 177 36 0 chr17 71688424 71688509 -23584142 - B3A SINE B2 -53 163 74 3 1131 336 303 214 7 chr17 71688790 71689089 -23583562 - L1M4 LINE L1 -503 5675 5315 3 1131 924 134 21 7 chr17 71689106 71689249 -23583402 - B1_Mus1 SINE Alu -3 145 1 3 1131 1425 94 16 0 chr17 71689277 71689469 -23583182 - B2_Mm2 SINE B2 0 195 1 3 1131 1172 48 7 7 chr17 71689695 71689842 -23582809 - B1_Mus1 SINE Alu 0 148 2 3 1131 990 124 0 20 chr17 71689984 71690132 -23582519 + B1_Mus2 SINE Alu 1 145 -2 3 1131 1760 139 212 35 chr17 71690995 71691391 -23581260 - RMER4A LTR ERVK 0 466 1 3 1131 2038 161 62 80 chr17 71691417 71691936 -23580715 + RLTR11A LTR ERVK 7 517 -11 3 1131 621 231 45 0 chr17 71691936 71692070 -23580581 - B1_Mur1 SINE Alu -7 142 3 4 1131 222 37 0 0 chr17 71692151 71692178 -23580473 + (CGGG)n Simple_repeat Simple_repeat 3 29 0 4 1131 189 0 0 0 chr17 71692488 71692509 -23580142 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1131 1107 56 14 0 chr17 71692509 71692651 -23580000 - B1_Mus2 SINE Alu 0 147 4 4 1131 821 158 261 0 chr17 71693420 71693585 -23579066 - B3 SINE B2 -5 211 4 4 1131 357 177 16 0 chr17 71693597 71693659 -23578992 - ID_B1 SINE B4 -5 219 157 4 1131 275 272 87 0 chr17 71693659 71693689 -23578962 - B1F SINE Alu -5 144 45 4 1131 711 245 90 20 chr17 71695354 71695554 -23577097 - B3 SINE B2 -2 214 1 4 1131 351 270 24 132 chr17 71695931 71696034 -23576617 + ID_B1 SINE B4 35 209 -15 4 1131 595 184 0 0 chr17 71696034 71696137 -23576514 + B1_Mur2 SINE Alu 40 142 -7 4 141 270 278 50 20 chr17 71696348 71696447 -23576204 - B1F1 SINE Alu -45 104 3 4 1132 1126 75 0 7 chr17 71696893 71697040 -23575611 - B1_Mus2 SINE Alu -1 146 1 4 1132 2207 146 88 8 chr17 71697269 71697655 -23574996 + MTC LTR MaLR 5 421 0 4 1132 680 284 230 3 chr17 71698433 71698772 -23573879 + MTD LTR MaLR 1 416 -3 4 1132 352 240 27 0 chr17 71699329 71699404 -23573247 - ID4 SINE ID -2 81 5 4 1132 443 270 94 51 chr17 71699881 71700115 -23572536 - L1M3 LINE L1 -370 5798 5555 4 1132 272 250 80 68 chr17 71700306 71700469 -23572182 + RLTR15 LTR ERVK 80 244 -115 4 1132 347 269 54 41 chr17 71701177 71701309 -23571342 + B1F SINE Alu 1 139 -10 4 1132 603 0 0 0 chr17 71701309 71701376 -23571275 + (CAAAG)n Simple_repeat Simple_repeat 2 68 0 4 1132 347 269 54 41 chr17 71701376 71701390 -23571261 + B1F SINE Alu 140 149 0 4 1132 403 217 47 9 chr17 71701599 71701706 -23570945 + L1MB2 LINE L1 6031 6141 -30 4 1132 247 256 141 0 chr17 71701960 71702038 -23570613 - PB1 SINE Alu -38 89 1 4 1132 272 243 143 0 chr17 71702343 71702413 -23570238 + ID4_ SINE ID 4 83 0 4 1132 632 216 44 70 chr17 71702454 71702683 -23569968 + ID_B1 SINE B4 1 223 -1 4 1132 800 155 14 21 chr17 71702991 71703136 -23569515 + B1_Mur2 SINE Alu 5 148 -1 4 1132 217 250 11 33 chr17 71703137 71703249 -23569402 + (TAAA)n Simple_repeat Simple_repeat 1 109 0 4 1132 309 324 24 121 chr17 71703597 71703895 -23568756 + B4A SINE B4 1 269 -23 4 1132 288 91 0 0 chr17 71703897 71703941 -23568710 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1132 855 149 82 0 chr17 71704351 71704485 -23568166 - B1_Mus1 SINE Alu -1 147 3 4 1132 442 173 198 52 chr17 71704659 71704775 -23567876 + B1_Mus1 SINE Alu 6 138 -10 4 1132 183 42 0 0 chr17 71704775 71704799 -23567852 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1132 398 181 194 101 chr17 71704799 71704811 -23567840 + B1_Mur4 SINE Alu 139 146 -4 4 1132 827 168 125 20 chr17 71705010 71705210 -23567441 + URR1A DNA MER1_type 6 226 0 4 1132 222 288 0 88 chr17 71705237 71705317 -23567334 - B1F SINE Alu -12 137 65 4 1132 4209 91 55 2 chr17 71705318 71705922 -23566729 + Lx2 LINE L1 6361 6996 -1 4 1132 23 0 0 0 chr17 71705939 71705962 -23566689 + AT_rich Low_complexity Low_complexity 1 23 0 4 1132 295 343 124 0 chr17 71705987 71706156 -23566495 + MLT1B LTR MaLR 79 268 -122 4 1132 262 274 32 96 chr17 71706410 71706535 -23566116 - PB1D10 SINE Alu 0 117 1 4 1132 708 284 92 38 chr17 71706598 71706945 -23565706 - L1M2 LINE L1 -680 5620 5255 4 1132 454 276 156 23 chr17 71706964 71707220 -23565431 + L1_Rod LINE L1 5558 5847 0 4 1132 22 0 0 0 chr17 71707848 71707870 -23564781 + AT_rich Low_complexity Low_complexity 1 22 0 4 1132 290 256 0 13 chr17 71708030 71708109 -23564542 + B1_Mus1 SINE Alu 16 93 -55 4 1132 782 245 53 24 chr17 71708277 71708486 -23564165 - Lx8 LINE L1 -83 7390 7176 4 1132 510 265 60 13 chr17 71708641 71708790 -23563861 - B4A SINE B4 -136 156 1 4 1132 401 306 0 1 chr17 71708929 71709037 -23563614 + B4A SINE B4 97 204 -88 4 1132 3302 48 132 4 chr17 71709718 71710197 -23562454 + LTRIS2 LTR ERV1 25 564 0 4 1132 1397 65 43 0 chr17 71710323 71710507 -23562144 + B2_Mm2 SINE B2 2 193 -2 4 1132 240 35 0 0 chr17 71710523 71710552 -23562099 + (A)n Simple_repeat Simple_repeat 1 29 0 4 1132 1129 61 0 39 chr17 71710554 71710707 -23561944 + B1_Mus2 SINE Alu 1 147 0 4 1132 195 69 0 0 chr17 71710709 71710738 -23561913 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 4 1132 300 254 15 0 chr17 71711030 71711097 -23561554 + ID4_ SINE ID 8 75 -8 4 1132 389 222 11 11 chr17 71711893 71711984 -23560667 + B3 SINE B2 1 91 -125 4 1132 422 311 22 22 chr17 71712091 71712229 -23560422 + RSINE1 SINE B4 17 154 -11 4 1132 21 0 0 0 chr17 71712446 71712467 -23560184 + AT_rich Low_complexity Low_complexity 1 21 0 4 1132 1019 106 0 21 chr17 71712769 71712914 -23559737 + B1_Mur4 SINE Alu 1 142 -8 4 1132 1076 222 0 0 chr17 71713080 71713292 -23559359 - B3 SINE B2 0 216 5 4 1132 795 211 78 16 chr17 71713344 71713537 -23559114 + B3 SINE B2 6 210 -6 4 1132 709 206 0 14 chr17 71713550 71713693 -23558958 + B1_Mus2 SINE Alu 7 147 0 4 1132 1437 74 32 0 chr17 71713740 71713929 -23558722 + B2_Mm2 SINE B2 1 195 0 4 1132 257 0 0 29 chr17 71717366 71717400 -23555251 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 4 1132 368 221 167 44 chr17 71717445 71717625 -23555026 - B3 SINE B2 -12 204 3 4 1132 301 188 109 0 chr17 71717766 71717830 -23554821 - ID2 SINE ID -10 73 3 4 1132 1183 29 0 0 chr17 71718172 71718310 -23554341 + B1_Mm SINE Alu 1 138 -9 4 1132 318 295 19 9 chr17 71719876 71719982 -23552669 + Tigger7 DNA MER2_type 8 114 -2377 4 1132 288 265 193 20 chr17 71720008 71720158 -23552493 + Tigger7 DNA MER2_type 2312 2487 -4 4 1132 583 235 96 76 chr17 71720488 71720686 -23551965 - B3 SINE B2 -12 204 3 4 1132 401 245 71 91 chr17 71722418 71722515 -23550136 + Lx8 LINE L1 5638 5734 -1739 4 1132 797 161 36 0 chr17 71722515 71722652 -23549999 + B1_Mur4 SINE Alu 1 142 -8 4 1132 401 245 71 91 chr17 71722652 71722850 -23549801 + Lx8 LINE L1 5735 5927 -1546 4 1132 592 278 64 16 chr17 71723019 71723233 -23549418 + ORR1D2 LTR MaLR 24 252 -107 4 1132 234 0 0 0 chr17 71723286 71723312 -23549339 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1132 943 138 0 0 chr17 71723414 71723552 -23549099 + B1_Mur3 SINE Alu 1 138 -11 4 1132 282 250 17 0 chr17 71723624 71723684 -23548967 - B4A SINE B4 -231 61 1 4 1132 182 91 30 0 chr17 71723805 71723838 -23548813 + (CCAA)n Simple_repeat Simple_repeat 1 34 0 4 1132 650 236 55 6 chr17 71724360 71724543 -23548108 - B2_Mm2 SINE B2 -3 192 1 4 1132 530 347 96 4 chr17 71724670 71724910 -23547741 + MER68 LTR ERVL 8 269 -294 4 1132 357 348 41 36 chr17 71724953 71725147 -23547504 + MER68 LTR ERVL 367 561 -2 4 1132 309 321 142 0 chr17 71725149 71725311 -23547340 + L1M5 LINE L1 5045 5229 -917 4 1132 1310 247 20 15 chr17 71725336 71725677 -23546974 + RLTR15 LTR ERVK 1 343 -16 4 1132 398 324 34 34 chr17 71725746 71725893 -23546758 + B4A SINE B4 10 156 -136 4 1132 238 167 68 96 chr17 71725922 71725995 -23546656 + B3A SINE B2 122 192 -6 4 1132 231 97 45 61 chr17 71726121 71726187 -23546464 + (CAAA)n Simple_repeat Simple_repeat 2 66 0 4 1132 593 345 64 22 chr17 71726828 71727095 -23545556 + B4A SINE B4 3 280 -12 4 1132 26 30 0 0 chr17 71727616 71727649 -23545002 + AT_rich Low_complexity Low_complexity 1 33 0 4 1132 1185 142 21 0 chr17 71729196 71729386 -23543265 - B2_Mm2 SINE B2 -1 194 1 4 1132 259 27 0 26 chr17 71729755 71729793 -23542858 + B1_Mur4 SINE Alu 2 38 -112 4 1132 324 0 0 0 chr17 71730058 71730094 -23542557 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 4 1132 1360 13 0 0 chr17 71730094 71730252 -23542399 - B2_Mm1a SINE B2 -35 158 1 4 1132 828 197 158 0 chr17 71730439 71730622 -23542029 - B3 SINE B2 -3 213 2 4 1132 671 81 0 0 chr17 71730867 71730953 -23541698 + RLTR11A2 LTR ERVK 2 87 -440 4 1132 28242 18 2 0 chr17 71730979 71734420 -23538231 + L1Md_T LINE L1 2139 5586 -297 4 1132 8514 30 0 0 chr17 71734420 71735416 -23537235 + L1Md_T LINE L1 5587 6582 0 4 1132 643 320 62 25 chr17 71735603 71735879 -23536772 + B4A SINE B4 1 286 -6 4 1132 183 222 0 0 chr17 71736677 71736722 -23535929 + T-rich Low_complexity Low_complexity 1 45 0 4 1132 550 255 55 28 chr17 71736773 71736918 -23535733 - B1_Mur4 SINE Alu -1 149 1 4 1132 795 159 7 21 chr17 71736977 71737118 -23535533 + B1_Mus1 SINE Alu 1 139 -9 4 1132 1579 27 32 0 chr17 71738317 71738504 -23534147 + B2_Mm1t SINE B2 1 193 0 4 1132 26 30 0 0 chr17 71738987 71739020 -23533631 + AT_rich Low_complexity Low_complexity 1 33 0 4 1132 477 0 0 0 chr17 71739443 71739496 -23533155 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 1132 229 301 19 139 chr17 71740346 71740372 -23532279 + MT2B2 LTR ERVL 147 159 -425 4 1132 527 234 20 0 chr17 71740372 71740484 -23532167 + PB1D10 SINE Alu 1 125 -2 4 1132 23 68 0 0 chr17 71740547 71740591 -23532060 + AT_rich Low_complexity Low_complexity 1 44 0 4 1132 478 250 77 15 chr17 71740920 71741050 -23531601 - ID_B1 SINE B4 0 224 87 4 1132 457 144 11 11 chr17 71741126 71741217 -23531434 + CT-rich Low_complexity Low_complexity 3 93 0 4 1132 1083 88 0 26 chr17 71741217 71741368 -23531283 - B1_Mm SINE Alu 0 147 1 4 1132 657 25 0 0 chr17 71741374 71741453 -23531198 + (TCC)n Simple_repeat Simple_repeat 3 81 0 5 1132 441 217 113 5 chr17 71741457 71741566 -23531085 - B1_Mus2 SINE Alu -3 117 1 5 1132 268 280 59 20 chr17 71741860 71741962 -23530689 + PB1D10 SINE Alu 12 117 0 5 1132 282 287 102 10 chr17 71742936 71743138 -23529513 + MMAR1 DNA Mariner 1 221 -1065 5 1132 320 73 36 0 chr17 71743139 71743194 -23529457 + (TATG)n Simple_repeat Simple_repeat 2 58 0 5 1132 533 206 52 67 chr17 71743262 71743397 -23529254 - B1_Mm SINE Alu -13 134 2 5 1132 995 254 96 16 chr17 71743398 71743710 -23528941 + MMAR1 DNA Mariner 208 544 -742 5 1132 859 216 43 5 chr17 71743750 71743936 -23528715 + MMAR1 DNA Mariner 1094 1286 0 5 1132 610 211 13 53 chr17 71744408 71744558 -23528093 + ID_B1 SINE B4 81 224 0 5 1132 327 136 46 14 chr17 71744741 71744824 -23527827 + Lx4B LINE L1 6882 7027 -31 5 1132 204 25 100 0 chr17 71744940 71744980 -23527671 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 5 1132 22 0 0 0 chr17 71745301 71745323 -23527328 + AT_rich Low_complexity Low_complexity 1 22 0 5 1132 3192 16 50 3 chr17 71745432 71745809 -23526842 + MTA_Mm LTR MaLR 2 396 0 5 1132 9563 22 0 0 chr17 71745809 71746907 -23525744 + MTA_Mm-int LTR MaLR 1 1098 0 5 1132 3362 30 5 5 chr17 71746907 71747303 -23525348 + MTA_Mm LTR MaLR 1 396 0 5 1132 332 337 21 90 chr17 71748433 71748622 -23524029 + B4A SINE B4 1 176 -116 5 1132 336 309 28 56 chr17 71748712 71748856 -23523795 + ID_B1 SINE B4 84 223 -1 5 1132 247 259 19 0 chr17 71749927 71749981 -23522670 + B4A SINE B4 85 139 -153 5 1132 30 77 0 0 chr17 71750187 71750252 -23522399 + AT_rich Low_complexity Low_complexity 1 65 0 5 1132 1497 63 5 0 chr17 71750399 71750590 -23522061 + B2_Mm1t SINE B2 2 193 0 5 1132 1235 41 0 0 chr17 71750596 71750743 -23521908 + B1_Mus2 SINE Alu 1 147 0 5 1132 231 182 0 0 chr17 71750743 71750791 -23521860 + A-rich Low_complexity Low_complexity 7 54 0 5 1132 554 222 109 28 chr17 71751836 71752018 -23520633 + ID_B1 SINE B4 44 216 -76 5 1132 819 235 22 11 chr17 71752652 71752837 -23519814 + B3 SINE B2 2 188 -28 5 1132 2341 216 47 20 chr17 71752928 71753662 -23518989 + Lx9 LINE L1 5228 6029 -1615 5 1132 2653 201 84 25 chr17 71753694 71754372 -23518279 + Lx9 LINE L1 6658 7375 -269 5 1132 527 0 16 0 chr17 71754372 71754435 -23518216 + (CA)n Simple_repeat Simple_repeat 2 65 0 5 1132 317 225 0 83 chr17 71754441 71754562 -23518089 + Lx9 LINE L1 7532 7642 -2 5 1132 227 259 219 0 chr17 71754601 71754806 -23517845 + L1MD3 LINE L1 7730 7979 -16 5 1132 932 206 26 21 chr17 71755002 71755195 -23517456 + B3 SINE B2 23 216 0 5 1132 2466 135 30 36 chr17 71755651 71756120 -23516531 + RMER4A LTR ERVK 1 466 0 5 1132 377 330 9 9 chr17 71756768 71756875 -23515776 - PB1D10 SINE Alu -10 107 1 5 1132 180 97 0 0 chr17 71757184 71757215 -23515436 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1132 23 0 0 0 chr17 71758524 71758547 -23514104 + AT_rich Low_complexity Low_complexity 1 23 0 5 1132 238 337 86 29 chr17 71758704 71758878 -23513773 - B3 SINE B2 -31 185 2 5 1132 506 211 102 32 chr17 71760289 71760446 -23512205 + MER67C LTR ERV1 538 705 -6 5 1132 494 293 67 8 chr17 71760541 71760675 -23511976 + B1F2 SINE Alu 1 142 -7 5 1132 335 290 59 20 chr17 71760697 71760799 -23511852 - B4 SINE B4 -186 106 1 5 1132 288 0 0 0 chr17 71760912 71760944 -23511707 + (TATG)n Simple_repeat Simple_repeat 2 33 0 5 1132 717 246 48 16 chr17 71761405 71761591 -23511060 + B3A SINE B2 2 193 -5 5 1132 375 341 16 8 chr17 71762107 71762231 -23510420 + MER5A DNA MER1_type 2 126 -63 5 1132 211 245 61 0 chr17 71762266 71762315 -23510336 + PB1D10 SINE Alu 65 116 -1 5 1132 307 294 0 23 chr17 71762405 71762492 -23510159 + MER5A DNA MER1_type 103 187 -2 5 1132 789 210 116 0 chr17 71762864 71763045 -23509606 + B3 SINE B2 1 202 -14 5 1132 252 130 0 0 chr17 71763189 71763235 -23509416 + (A)n Simple_repeat Simple_repeat 1 46 0 5 1132 206 83 56 0 chr17 71763702 71763738 -23508913 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 5 1132 21 0 0 0 chr17 71764019 71764040 -23508611 + AT_rich Low_complexity Low_complexity 1 21 0 5 1132 1395 60 49 5 chr17 71764156 71764341 -23508310 + B2_Mm2 SINE B2 1 193 -2 5 1132 243 188 0 0 chr17 71764688 71764736 -23507915 - ID4 SINE ID -7 76 29 5 1132 396 254 124 56 chr17 71764740 71764917 -23507734 + B3 SINE B2 1 216 0 5 1132 186 43 0 0 chr17 71765025 71765048 -23507603 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 5 1132 624 311 147 18 chr17 71765284 71765966 -23506685 - L1_Mur3 LINE L1 -254 5626 4857 5 1132 654 186 6 116 chr17 71766063 71766227 -23506424 - B1_Mur2 SINE Alu -2 147 2 5 1132 1381 312 78 51 chr17 71766250 71766847 -23505804 - L1_Mur3 LINE L1 -1245 4635 3998 5 1132 546 290 37 16 chr17 71766847 71767036 -23505615 + B3A SINE B2 3 195 -3 5 1132 1381 312 78 51 chr17 71767036 71767558 -23505093 - L1_Mur3 LINE L1 -1883 3997 3486 5 1132 285 313 16 74 chr17 71767598 71767614 -23505037 + MT2B LTR ERVL 152 264 -336 5 1132 426 252 77 10 chr17 71767614 71767718 -23504933 + B1_Mm SINE Alu 2 112 -35 5 1132 372 22 0 0 chr17 71767931 71767976 -23504675 + (TCC)n Simple_repeat Simple_repeat 1 45 0 5 1132 2408 101 68 23 chr17 71768034 71768431 -23504220 + RLTR9F LTR ERVK 1 415 0 5 1132 5624 127 65 36 chr17 71768433 71769722 -23502929 + ETnERV2-int LTR ERVK 3 2085 -5321 5 1132 5368 124 24 16 chr17 71769747 71770708 -23501943 + ETnERV2-int LTR ERVK 1995 3446 -3960 5 1132 2104 108 32 12 chr17 71771035 71771380 -23501271 + ETnERV2-int LTR ERVK 3441 3792 -3614 5 1132 757 210 44 6 chr17 71771385 71771567 -23501084 + ETnERV2-int LTR ERVK 6234 6422 -984 5 1132 394 122 27 13 chr17 71771785 71771860 -23500791 + ETnERV2-int LTR ERVK 7331 7406 0 5 1132 2228 106 100 11 chr17 71771860 71772241 -23500410 + RLTR9F LTR ERVK 1 415 0 5 1132 277 371 43 0 chr17 71772659 71772775 -23499876 - MER2 DNA MER2_type -10 335 215 5 1132 576 254 14 35 chr17 71772777 71772792 -23499859 - B1F SINE Alu 0 149 137 5 1132 216 0 0 0 chr17 71772792 71772816 -23499835 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1132 576 254 14 35 chr17 71772816 71772943 -23499708 - B1F SINE Alu -13 136 10 5 1132 445 255 64 51 chr17 71772955 71773112 -23499539 - MER2 DNA MER2_type -124 221 63 5 1132 327 136 0 0 chr17 71773286 71773345 -23499306 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1132 4549 161 52 36 chr17 71773498 71774365 -23498286 + RMER13B LTR ERVK 1 881 -27 5 1132 255 31 0 0 chr17 71776171 71776203 -23496448 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 5 1132 273 225 155 0 chr17 71776249 71776320 -23496331 - B1F SINE Alu -31 118 37 5 1132 614 173 9 0 chr17 71776601 71776711 -23495940 - B1_Mur1 SINE Alu 0 149 39 5 1132 253 265 89 89 chr17 71776621 71776733 -23495918 - MT2B LTR ERVL -326 275 164 5 1132 262 282 93 12 chr17 71777796 71777882 -23494769 + PB1D9 SINE Alu 20 112 -8 5 1132 516 93 0 0 chr17 71779549 71779624 -23493027 + (CA)n Simple_repeat Simple_repeat 1 75 0 5 1132 516 274 0 0 chr17 71779661 71779767 -23492884 + RSINE1 SINE B4 4 109 -56 5 1132 593 234 23 8 chr17 71779878 71780007 -23492644 + ID_B1 SINE B4 78 208 -16 5 1132 189 147 0 0 chr17 71780354 71780388 -23492263 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1132 16710 163 103 40 chr17 71780788 71780917 -23491734 + Lx7 LINE L1 1835 1963 -3917 5 1132 251 0 59 0 chr17 71780917 71780951 -23491700 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 5 1132 16710 163 103 40 chr17 71780951 71783219 -23489432 + Lx7 LINE L1 1964 4279 -1601 5 1132 234 0 0 0 chr17 71783219 71783245 -23489406 + (CAA)n Simple_repeat Simple_repeat 2 27 0 5 1132 16710 168 97 43 chr17 71783245 71784804 -23487847 + Lx7 LINE L1 4280 6041 -1655 5 1132 2997 24 42 0 chr17 71784804 71785136 -23487515 + ORR1A1 LTR MaLR 1 346 0 5 1132 2294 216 34 71 chr17 71785136 71785315 -23487336 + Lx7 LINE L1 6042 6216 -1480 5 1132 1821 246 100 38 chr17 71785296 71785998 -23486653 + Lx7 LINE L1 6934 7696 0 5 1132 492 18 0 0 chr17 71786420 71786477 -23486174 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 1132 477 34 0 0 chr17 71786477 71786535 -23486116 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 1132 867 126 0 15 chr17 71786549 71786686 -23485965 - B1_Mus1 SINE Alu 0 148 14 5 1132 354 262 58 10 chr17 71789135 71789239 -23483412 - PB1D10 SINE Alu -8 109 1 5 1132 217 193 17 17 chr17 71789657 71789715 -23482936 + (CATA)n Simple_repeat Simple_repeat 1 58 0 5 1132 34 96 0 0 chr17 71789968 71790072 -23482579 + AT_rich Low_complexity Low_complexity 1 104 0 5 1132 29 0 0 0 chr17 71790455 71790484 -23482167 + AT_rich Low_complexity Low_complexity 1 29 0 5 1132 1283 49 0 0 chr17 71790790 71790932 -23481719 - B1_Mm SINE Alu -5 142 1 5 1132 522 139 0 0 chr17 71791923 71792009 -23480642 + (TA)n Simple_repeat Simple_repeat 1 86 0 5 1132 427 212 34 42 chr17 71793055 71793173 -23479478 + PB1D10 SINE Alu 1 117 0 5 1132 306 255 172 10 chr17 71793502 71793601 -23479050 + B1_Mur3 SINE Alu 3 117 -32 5 1132 368 304 43 35 chr17 71794099 71794215 -23478436 + B3A SINE B2 58 174 -24 5 1132 749 142 8 0 chr17 71794261 71794381 -23478270 + B2_Mm2 SINE B2 75 195 0 5 1132 562 304 100 67 chr17 71794488 71794819 -23477832 + MTE2b LTR MaLR 27 368 -11 5 1132 594 244 22 15 chr17 71794832 71794969 -23477682 + B1F SINE Alu 1 138 -11 5 1132 1900 147 48 31 chr17 71795019 71795370 -23477281 - ORR1D1 LTR MaLR -17 357 1 5 1132 2124 207 57 4 chr17 71795370 71795841 -23476810 - ORR1D1-int LTR MaLR 0 1370 875 5 1132 1895 220 47 19 chr17 71795907 71796334 -23476317 - ORR1D1-int LTR MaLR -931 439 1 5 1132 1520 194 71 24 chr17 71796334 71796672 -23475979 - ORR1D1 LTR MaLR 0 374 21 5 1132 399 222 12 0 chr17 71796962 71797043 -23475608 + B3 SINE B2 123 204 -12 5 1132 310 236 284 31 chr17 71797446 71797573 -23475078 + RSINE1 SINE B4 3 161 -4 5 1132 223 226 37 19 chr17 71798243 71798297 -23474354 + PB1 SINE Alu 67 121 -6 5 1132 288 245 0 0 chr17 71798340 71798403 -23474248 + ID4 SINE ID 2 64 -88 5 1132 1252 49 7 0 chr17 71798455 71798599 -23474052 - B1_Mus2 SINE Alu 0 147 3 5 1132 21 36 0 0 chr17 71798599 71798627 -23474024 + AT_rich Low_complexity Low_complexity 1 28 0 5 1132 16123 103 11 4 chr17 71798743 71801847 -23470804 + L1_Mus3 LINE L1 3503 6631 -7 5 1132 320 253 175 47 chr17 71801894 71802151 -23470500 + L1MEf LINE L1 1158 1447 -5095 5 1132 336 337 65 37 chr17 71802222 71802438 -23470213 + L1MEf LINE L1 1560 1781 -4959 5 1132 608 279 44 0 chr17 71802451 71802587 -23470064 + B1F2 SINE Alu 1 142 -7 5 1132 772 250 65 0 chr17 71802735 71802903 -23469748 + B3A SINE B2 1 179 -19 5 1132 242 226 19 0 chr17 71803328 71803381 -23469270 + (CATA)n Simple_repeat Simple_repeat 3 56 0 5 1132 1369 97 16 11 chr17 71803460 71803647 -23469004 + B2_Mm2 SINE B2 1 188 -7 5 1132 681 167 71 57 chr17 71803907 71804047 -23468604 - B1_Mur3 SINE Alu -7 142 1 5 1132 234 284 250 10 chr17 71804152 71804344 -23468307 - MIRb SINE MIR -28 240 3 5 1132 387 242 39 62 chr17 71805171 71805299 -23467352 + MT2B LTR ERVL 152 276 -325 5 1132 812 137 84 0 chr17 71805195 71805326 -23467325 + B1_Mur4 SINE Alu 9 150 0 6 1132 215 230 40 0 chr17 71805618 71805692 -23466959 + (TAAA)n Simple_repeat Simple_repeat 1 77 0 6 1132 217 167 24 0 chr17 71806033 71806075 -23466576 + PB1 SINE Alu 85 127 0 6 1132 579 117 87 10 chr17 71806121 71806225 -23466426 - ORR1D1 LTR MaLR -262 112 1 6 1132 201 39 0 0 chr17 71806296 71806322 -23466329 + (TC)n Simple_repeat Simple_repeat 2 27 0 6 1132 333 0 0 0 chr17 71806322 71806358 -23466293 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1132 296 203 65 39 chr17 71806377 71806454 -23466197 - B1_Mus1 SINE Alu -33 115 37 6 1132 887 278 163 14 chr17 71806507 71806868 -23465783 + MTD LTR MaLR 5 419 0 6 1132 327 49 0 0 chr17 71806941 71806982 -23465669 + (T)n Simple_repeat Simple_repeat 1 41 0 6 1132 1293 41 0 7 chr17 71806982 71807130 -23465521 - B1_Mm SINE Alu 0 147 1 6 1132 369 243 96 10 chr17 71807132 71807236 -23465415 + MTE2a LTR MaLR 258 370 -9 6 1132 358 247 25 0 chr17 71807391 71807472 -23465179 + B1F1 SINE Alu 1 83 -66 6 1132 1056 64 7 0 chr17 71808355 71808495 -23464156 + B1_Mus1 SINE Alu 8 148 0 6 1132 942 169 0 0 chr17 71809308 71809444 -23463207 + B1_Mur4 SINE Alu 2 137 -13 6 1132 238 218 166 33 chr17 71809975 71810088 -23462563 - L2a LINE L2 -14 3412 3230 6 1132 520 296 49 0 chr17 71810089 71810231 -23462420 + RSINE1 SINE B4 2 150 -15 6 1132 327 104 0 0 chr17 71810240 71810288 -23462363 + (TGGA)n Simple_repeat Simple_repeat 3 50 0 6 1132 942 73 0 0 chr17 71810317 71810440 -23462211 - B1_Mus1 SINE Alu 0 148 26 6 1132 291 158 17 40 chr17 71810450 71810461 -23462190 + ID_B1 SINE B4 77 108 -184 6 1132 332 130 0 0 chr17 71810461 71810507 -23462144 + B1_Mus1 SINE Alu 1 46 -102 6 1132 1411 76 54 0 chr17 71810545 71810729 -23461922 + B2_Mm2 SINE B2 2 195 0 6 1132 1181 75 7 0 chr17 71810747 71810894 -23461757 + B1_Mus1 SINE Alu 1 148 0 6 1132 325 237 13 0 chr17 71810950 71811026 -23461625 + B1_Mur4 SINE Alu 34 110 -40 6 1132 491 240 174 0 chr17 71811036 71811157 -23461494 + B3A SINE B2 4 145 -53 6 1132 978 223 46 0 chr17 71811182 71811379 -23461272 + B3 SINE B2 8 213 -3 6 1132 671 223 22 131 chr17 71812699 71812921 -23459730 + B3A SINE B2 1 198 0 6 1132 357 82 0 0 chr17 71813487 71813536 -23459115 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1132 355 321 183 0 chr17 71813555 71813686 -23458965 - RSINE1 SINE B4 -8 157 3 6 1132 466 215 64 11 chr17 71813716 71813810 -23458841 - PB1D7 SINE Alu -1 119 21 6 1132 294 29 0 0 chr17 71813810 71813845 -23458806 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1132 516 248 64 21 chr17 71813857 71813880 -23458771 - ID_B1 SINE B4 -1 223 123 6 1132 571 229 55 0 chr17 71813880 71813989 -23458662 - B1F2 SINE Alu -30 119 5 6 1132 661 239 15 0 chr17 71814004 71814134 -23458517 - B1F1 SINE Alu -10 139 8 6 1132 420 307 89 41 chr17 71814190 71814336 -23458315 + RSINE1 SINE B4 3 155 -10 6 1132 549 299 52 0 chr17 71814606 71814760 -23457891 - B3 SINE B2 -6 210 49 6 1132 498 279 73 38 chr17 71815250 71815591 -23457060 + Lx7 LINE L1 5732 6084 -1376 6 1132 409 181 12 0 chr17 71815682 71815765 -23456886 + B1_Mus1 SINE Alu 14 97 -51 6 1132 761 115 44 0 chr17 71815843 71815956 -23456695 + B1_Mus1 SINE Alu 1 118 -30 6 1132 1284 316 75 37 chr17 71815958 71816529 -23456122 + Lx8 LINE L1 6758 7350 -123 6 1132 3573 248 151 30 chr17 71816604 71817764 -23454887 + Lx8 LINE L1 6172 7471 -2 6 1132 729 240 20 7 chr17 71817849 71818000 -23454651 - RSINE1 SINE B4 -10 155 3 6 1132 1274 22 0 0 chr17 71818308 71818447 -23454204 + B1_Mus2 SINE Alu 1 139 -8 6 1132 279 20 100 0 chr17 71818447 71818497 -23454154 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 6 1132 326 287 92 0 chr17 71818545 71818632 -23454019 + RSINE1 SINE B4 43 137 -28 6 1132 22 35 0 0 chr17 71818650 71818679 -23453972 + AT_rich Low_complexity Low_complexity 1 29 0 6 1132 737 221 46 17 chr17 71818917 71819092 -23453559 - B3A SINE B2 -17 181 2 6 1132 282 260 136 55 chr17 71819230 71819340 -23453311 - PB1D7 SINE Alu -1 119 1 6 1132 261 250 0 0 chr17 71819511 71819559 -23453092 + B4 SINE B4 86 133 -159 6 1132 31 0 0 0 chr17 71819568 71819599 -23453052 + AT_rich Low_complexity Low_complexity 1 31 0 6 1132 23 33 0 0 chr17 71819613 71819643 -23453008 + AT_rich Low_complexity Low_complexity 1 30 0 6 1132 402 263 0 34 chr17 71819643 71819761 -23452890 + PB1D9 SINE Alu 5 118 -2 6 1132 318 253 48 0 chr17 71819993 71820076 -23452575 + RSINE1 SINE B4 6 92 -73 6 1132 403 241 109 25 chr17 71820074 71820193 -23452458 + B4 SINE B4 164 292 0 6 1132 307 221 59 0 chr17 71820197 71820265 -23452386 + B4 SINE B4 221 292 0 6 1132 270 234 0 30 chr17 71820555 71820621 -23452030 - Tigger5 DNA MER2_type -55 2351 2288 6 1132 1896 140 199 48 chr17 71820622 71821079 -23451572 + RMER6A LTR ERVK 1 526 -230 6 1132 327 282 24 0 chr17 71821097 71821182 -23451469 + RSINE1 SINE B4 68 154 -11 6 1132 848 30 0 0 chr17 71821254 71821355 -23451296 + B2_Mm2 SINE B2 1 101 -94 6 1132 260 230 81 0 chr17 71821390 71821464 -23451187 + L1MA7 LINE L1 6092 6171 -120 6 1132 213 373 51 0 chr17 71821488 71821606 -23451045 + B1F SINE Alu 5 128 -21 6 1132 279 200 10 133 chr17 71821710 71821808 -23450843 + B1F SINE Alu 31 120 -29 6 1132 1083 205 156 113 chr17 71821848 71822082 -23450569 + MTD LTR MaLR 1 213 -206 6 1132 249 33 0 0 chr17 71822082 71822112 -23450539 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 6 1132 1083 206 170 103 chr17 71822112 71822272 -23450379 + MTD LTR MaLR 214 395 -24 6 1132 1244 139 0 10 chr17 71822276 71822472 -23450179 + B2_Mm2 SINE B2 2 195 0 6 1132 234 143 71 0 chr17 71822588 71822630 -23450021 + B3A SINE B2 1 45 -153 6 1132 1319 70 99 0 chr17 71822630 71822801 -23449850 + B2_Mm2 SINE B2 2 189 -6 6 1132 405 86 0 0 chr17 71822836 71822894 -23449757 + (GAAA)n Simple_repeat Simple_repeat 2 59 0 6 1132 1021 48 120 0 chr17 71822899 71823024 -23449627 + B1_Mus2 SINE Alu 1 140 -7 6 1132 306 224 0 0 chr17 71823032 71823117 -23449534 + A-rich Low_complexity Low_complexity 1 85 0 6 1132 636 174 148 0 chr17 71823183 71823332 -23449319 + URR1B DNA MER1_type 55 225 0 6 1132 385 217 152 23 chr17 71823410 71823542 -23449109 + B1F2 SINE Alu 1 149 0 6 1132 186 143 0 0 chr17 71824871 71824906 -23447745 + (CGGGG)n Simple_repeat Simple_repeat 5 39 0 6 1132 1066 92 0 0 chr17 71825439 71825580 -23447071 + L1_Mus1 LINE L1 6427 6567 0 6 1132 224 317 45 68 chr17 71826118 71826206 -23446445 - PB1D7 SINE Alu -34 86 1 6 1132 282 216 145 26 chr17 71826443 71826519 -23446132 - B3 SINE B2 -75 141 57 6 1132 1232 35 21 0 chr17 71826776 71826920 -23445731 + B1_Mm SINE Alu 1 147 0 6 1132 796 175 51 0 chr17 71827173 71827310 -23445341 + B1_Mur3 SINE Alu 1 144 -5 6 1132 268 300 100 0 chr17 71827355 71827445 -23445206 + B1F1 SINE Alu 2 100 -49 6 141 263 293 15 121 chr17 71827445 71827487 -23445164 + B4A SINE B4 87 204 -88 6 1133 22 0 0 0 chr17 71827642 71827664 -23444987 + AT_rich Low_complexity Low_complexity 1 22 0 6 1133 529 305 0 0 chr17 71827742 71827860 -23444791 - RSINE1 SINE B4 -23 142 25 6 1133 553 165 18 72 chr17 71827877 71827988 -23444663 - B1_Mur4 SINE Alu 0 150 46 6 1133 1281 34 14 0 chr17 71828018 71828164 -23444487 - B1_Mus1 SINE Alu 0 148 1 6 1133 792 144 48 41 chr17 71828400 71828545 -23444106 + B1_Mur4 SINE Alu 5 150 0 6 1133 318 26 0 0 chr17 71828732 71828771 -23443880 + (TCTG)n Simple_repeat Simple_repeat 4 42 0 6 1133 257 336 18 26 chr17 71828778 71828891 -23443760 - PB1D10 SINE Alu -5 112 1 6 1133 189 0 0 0 chr17 71829021 71829042 -23443609 + (T)n Simple_repeat Simple_repeat 1 21 0 6 1133 845 126 0 23 chr17 71829159 71829289 -23443362 - B1_Mus1 SINE Alu -21 127 1 6 1133 216 0 0 0 chr17 71829293 71829317 -23443334 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1133 284 225 49 12 chr17 71829590 71829671 -23442980 - MLT1H2 LTR MaLR -318 171 88 6 1133 3242 213 16 71 chr17 71830908 71831670 -23440981 + Lx5 LINE L1 6331 7050 0 6 1133 207 0 0 0 chr17 71831830 71831853 -23440798 + (T)n Simple_repeat Simple_repeat 1 23 0 6 1133 195 42 0 0 chr17 71832046 71832070 -23440581 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1133 273 40 164 91 chr17 71832070 71832125 -23440526 - B1_Mm SINE Alu 0 147 89 6 1133 1276 94 77 0 chr17 71832138 71832319 -23440332 + B2_Mm2 SINE B2 1 195 0 6 1133 1196 88 0 0 chr17 71832486 71832634 -23440017 + B1_Mus1 SINE Alu 1 148 0 6 1133 36 23 0 0 chr17 71832637 71832680 -23439971 + AT_rich Low_complexity Low_complexity 1 43 0 6 1133 391 196 39 98 chr17 71833280 71833382 -23439269 + Lx8 LINE L1 7052 7147 -326 6 1133 222 194 0 31 chr17 71833409 71833426 -23439225 + A-rich Low_complexity Low_complexity 1 16 0 6 1133 1696 26 0 0 chr17 71833426 71833618 -23439033 + B2_Mm1a SINE B2 2 193 0 6 1133 222 194 0 31 chr17 71833618 71833664 -23438987 + A-rich Low_complexity Low_complexity 17 62 0 6 1133 1136 41 7 52 chr17 71833778 71833932 -23438719 + B1_Mus2 SINE Alu 1 147 0 7 1133 198 0 0 0 chr17 71833935 71833957 -23438694 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 7 1133 275 256 72 19 chr17 71834101 71834240 -23438411 + B4 SINE B4 1 151 -141 7 1133 333 282 48 0 chr17 71834376 71834479 -23438172 + L1MC1 LINE L1 6104 6211 -122 7 1133 528 235 15 0 chr17 71834645 71834777 -23437874 - ID_B1 SINE B4 -11 213 80 7 1133 1214 62 0 0 chr17 71836295 71836441 -23436210 - B1_Mus1 SINE Alu 0 148 3 7 1133 28 0 0 0 chr17 71836689 71836717 -23435934 + AT_rich Low_complexity Low_complexity 1 28 0 7 1133 689 165 279 6 chr17 71836719 71836884 -23435767 - B3 SINE B2 -6 210 1 7 1133 388 280 33 33 chr17 71836893 71836905 -23435746 - B3A SINE B2 0 198 187 7 1133 257 0 0 29 chr17 71836905 71836939 -23435712 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1133 388 280 33 33 chr17 71836939 71837048 -23435603 - B3A SINE B2 -12 186 77 7 1133 642 161 35 9 chr17 71837098 71837211 -23435440 - B1_Mur3 SINE Alu 0 149 34 7 1133 315 0 0 0 chr17 71837211 71837246 -23435405 + (TATG)n Simple_repeat Simple_repeat 2 36 0 7 1133 581 240 101 32 chr17 71837447 71837552 -23435099 - ID_B1 SINE B4 -22 202 88 7 1133 1707 164 134 21 chr17 71837552 71837828 -23434823 - ORR1D1 LTR MaLR 0 374 56 7 1133 906 119 0 0 chr17 71837828 71837971 -23434680 + (TG)n Simple_repeat Simple_repeat 1 143 0 7 1133 1707 164 134 21 chr17 71837971 71838030 -23434621 - ORR1D1 LTR MaLR -319 55 2 7 1133 581 240 101 32 chr17 71838030 71838113 -23434538 - ID SINE ID -137 87 1 7 1133 1551 62 0 5 chr17 71838224 71838419 -23434232 - B2_Mm2 SINE B2 -1 194 1 7 1133 532 210 32 8 chr17 71838779 71838904 -23433747 - ORR1E LTR MaLR -223 136 9 7 1133 248 293 61 0 chr17 71838931 71839013 -23433638 + PB1D10 SINE Alu 1 87 -30 7 1133 2226 137 8 3 chr17 71839040 71839407 -23433244 - ORR1B1 LTR MaLR -25 369 1 7 1133 992 283 18 11 chr17 71839499 71839781 -23432870 - B4A SINE B4 0 292 9 7 1133 457 250 9 0 chr17 71839805 71839913 -23432738 - PB1D7 SINE Alu 0 120 12 7 1133 1078 188 14 9 chr17 71839983 71840193 -23432458 - B3 SINE B2 -5 211 1 7 1133 300 127 0 0 chr17 71840448 71840503 -23432148 + (CCCA)n Simple_repeat Simple_repeat 2 56 0 7 1133 422 279 0 35 chr17 71840680 71840795 -23431856 - RSINE1 SINE B4 -54 111 1 7 1133 420 20 0 0 chr17 71840904 71840953 -23431698 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 1133 315 284 0 12 chr17 71840973 71841055 -23431596 - PB1D10 SINE Alu -34 83 3 7 1133 25 0 0 0 chr17 71841081 71841106 -23431545 + AT_rich Low_complexity Low_complexity 1 25 0 7 1133 261 302 61 20 chr17 71841152 71841250 -23431401 + PB1 SINE Alu 26 127 0 7 1133 531 0 0 0 chr17 71841263 71841322 -23431329 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 7 1133 598 222 88 12 chr17 71841428 71841588 -23431063 + B3 SINE B2 45 216 0 7 1133 830 86 26 0 chr17 71841855 71841972 -23430679 + PB1D9 SINE Alu 1 120 0 7 1133 335 113 16 0 chr17 71841972 71842034 -23430617 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 7 1133 837 189 0 20 chr17 71842046 71842197 -23430454 + B1_Mur3 SINE Alu 1 148 -1 7 1133 315 0 0 0 chr17 71842227 71842262 -23430389 + (CAAAC)n Simple_repeat Simple_repeat 5 39 0 7 1133 609 272 38 0 chr17 71842579 71842737 -23429914 + ID_B1 SINE B4 33 196 -28 7 1133 780 32 0 0 chr17 71843005 71843100 -23429551 + (TTC)n Simple_repeat Simple_repeat 1 95 0 7 1133 1154 37 0 0 chr17 71843100 71843235 -23429416 - B1_Mm SINE Alu -12 135 1 7 1133 2837 75 23 30 chr17 71843261 71843657 -23428994 - L1Md_F2 LINE L1 -2 6580 6188 7 1133 1574 212 76 38 chr17 71844195 71844636 -23428015 + RMER19C LTR ERVK 129 873 -29 7 1133 352 197 26 13 chr17 71844688 71844765 -23427886 - ID4 SINE ID -1 82 5 7 1133 1252 92 17 6 chr17 71845775 71845949 -23426702 + B2_Mm2 SINE B2 1 176 -19 7 1133 425 224 35 0 chr17 71845983 71846097 -23426554 + PB1D10 SINE Alu 1 117 0 7 1133 448 142 125 54 chr17 71846800 71846912 -23425739 - PB1D9 SINE Alu 0 120 1 7 1133 861 160 38 54 chr17 71847269 71847454 -23425197 - B2_Mm2 SINE B2 -12 183 2 7 1133 212 0 36 0 chr17 71847454 71847482 -23425169 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 7 1133 1087 67 0 0 chr17 71847482 71847617 -23425034 - B1_Mus1 SINE Alu -13 135 1 7 1133 585 180 24 32 chr17 71847624 71847750 -23424901 - B1_Mus2 SINE Alu -2 145 21 7 1133 240 274 52 86 chr17 71847651 71847767 -23424884 - MT2B LTR ERVL -322 279 168 7 1133 298 292 9 9 chr17 71847890 71847997 -23424654 - PB1D10 SINE Alu -1 116 10 7 1133 383 256 11 0 chr17 71848304 71848402 -23424249 - B1F SINE Alu -43 106 2 7 1133 1025 53 38 0 chr17 71849093 71849224 -23423427 + B1_Mm SINE Alu 2 137 -10 7 1133 240 59 0 0 chr17 71849224 71849258 -23423393 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 1133 356 202 177 0 chr17 71849275 71849354 -23423297 + B1_Mur2 SINE Alu 1 93 -56 7 1133 522 168 100 64 chr17 71849443 71849583 -23423068 - B1_Mur3 SINE Alu -1 148 4 7 1133 371 348 14 29 chr17 71850576 71850715 -23421936 - B1F SINE Alu -12 137 1 7 1133 233 310 28 14 chr17 71850654 71850726 -23421925 - B4A SINE B4 -147 145 73 7 1133 982 200 53 14 chr17 71851016 71851224 -23421427 + B3 SINE B2 1 216 0 7 1133 482 286 46 29 chr17 71851234 71851451 -23421200 + Lx7 LINE L1 5595 5823 -474 7 1133 943 196 23 6 chr17 71851451 71851625 -23421026 + B3A SINE B2 1 177 -21 7 1133 270 275 83 56 chr17 71851998 71852106 -23420545 - PB1D10 SINE Alu -6 111 1 7 1133 885 241 38 10 chr17 71852115 71852324 -23420327 - B3 SINE B2 -1 215 1 7 1133 233 146 21 0 chr17 71852330 71852378 -23420273 + (TCTG)n Simple_repeat Simple_repeat 1 49 0 7 1133 495 87 0 0 chr17 71852381 71852450 -23420201 + (CCTA)n Simple_repeat Simple_repeat 2 70 0 7 1133 288 0 0 0 chr17 71852548 71852580 -23420071 + (CCTA)n Simple_repeat Simple_repeat 2 33 0 7 1133 401 246 90 0 chr17 71852638 71852764 -23419887 - B3 SINE B2 -26 172 22 7 1133 378 0 0 0 chr17 71852787 71852829 -23419822 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1133 388 253 11 0 chr17 71852841 71852936 -23419715 - ID_B1 SINE B4 -2 222 127 7 1133 305 227 136 0 chr17 71853109 71853197 -23419454 - PB1D7 SINE Alu 0 120 21 7 1133 618 121 20 0 chr17 71853883 71853982 -23418669 + B1_Mus1 SINE Alu 40 140 -8 7 1133 725 199 43 49 chr17 71854454 71854639 -23418012 - B3A SINE B2 -13 185 2 7 1133 237 260 52 0 chr17 71854943 71855020 -23417631 - ID4 SINE ID -2 81 1 7 1133 411 298 17 9 chr17 71855020 71855131 -23417520 - B3A SINE B2 -83 115 4 7 1133 313 220 25 3 chr17 71855418 71855524 -23417127 + B1_Mus2 SINE Alu 1 133 -16 7 1133 215 278 0 0 chr17 71855546 71855600 -23417051 + B1F SINE Alu 1 54 -95 7 1133 445 174 35 0 chr17 71855796 71855882 -23416769 - 5S rRNA rRNA -31 90 2 7 1133 243 189 19 0 chr17 71859478 71859531 -23413120 + PB1 SINE Alu 72 125 -2 7 1133 301 276 102 18 chr17 71859578 71859744 -23412907 + MLT1D LTR MaLR 46 225 -280 7 1133 553 299 24 5 chr17 71859747 71859955 -23412696 + B3 SINE B2 1 212 -4 7 1133 249 108 0 0 chr17 71859957 71859994 -23412657 + (GGA)n Simple_repeat Simple_repeat 3 39 0 7 1133 276 154 108 0 chr17 71860082 71860147 -23412504 + PB1D10 SINE Alu 37 108 -9 7 1133 971 181 0 0 chr17 71860345 71860494 -23412157 - B1_Mur2 SINE Alu 0 149 1 7 1133 246 214 0 0 chr17 71860496 71860552 -23412099 + MLT1D LTR MaLR 432 487 -18 7 1133 757 215 77 20 chr17 71861110 71861305 -23411346 + B3 SINE B2 1 206 -10 7 1133 518 316 56 39 chr17 71862279 71862565 -23410086 - B4A SINE B4 0 292 2 7 1133 1301 108 38 0 chr17 71862766 71862952 -23409699 + B2_Mm2 SINE B2 2 194 -1 7 1133 333 0 0 0 chr17 71863103 71863140 -23409511 + (TTTTA)n Simple_repeat Simple_repeat 2 38 0 7 1133 599 254 14 0 chr17 71863141 71863283 -23409368 - B1_Mus1 SINE Alu -3 145 2 7 1133 1165 62 7 0 chr17 71863918 71864063 -23408588 + B1_Mm SINE Alu 2 147 0 7 1133 325 186 121 20 chr17 71864114 71864213 -23408438 + B3 SINE B2 4 112 -104 7 1133 1426 84 21 0 chr17 71864335 71864526 -23408125 + B2_Mm2 SINE B2 1 195 0 7 1133 201 39 0 0 chr17 71864658 71864684 -23407967 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 1133 222 357 44 9 chr17 71865182 71865295 -23407356 + B1F SINE Alu 27 143 -6 7 1133 228 67 0 0 chr17 71865468 71865498 -23407153 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 7 1133 563 178 155 0 chr17 71865514 71865643 -23407008 - B1_Mur1 SINE Alu 0 149 1 7 1133 1243 97 11 17 chr17 71865675 71865854 -23406797 - B2_Mm2 SINE B2 -17 178 1 7 1133 999 146 9 111 chr17 71865943 71866159 -23406492 - B2_Mm2 SINE B2 0 195 2 7 1133 508 297 0 0 chr17 71866234 71866362 -23406289 + B1_Mur2 SINE Alu 5 132 -17 7 1133 357 60 0 0 chr17 71866586 71866600 -23406051 + (A)n Simple_repeat Simple_repeat 1 14 0 7 1133 951 67 97 0 chr17 71866600 71866734 -23405917 + B1_Mus2 SINE Alu 1 147 0 7 1133 357 60 0 0 chr17 71866734 71866769 -23405882 + (A)n Simple_repeat Simple_repeat 1 35 0 7 1133 250 310 0 0 chr17 71867221 71867292 -23405359 + (TATATG)n Simple_repeat Simple_repeat 3 73 0 7 1133 544 318 0 0 chr17 71867298 71867449 -23405202 - RSINE1 SINE B4 -10 155 5 8 1133 591 208 108 0 chr17 71867602 71867732 -23404919 - B1_Mur2 SINE Alu -5 144 1 8 1133 228 273 0 0 chr17 71867835 71867890 -23404761 + PB1D10 SINE Alu 15 69 -48 8 1133 238 281 0 17 chr17 71868560 71868618 -23404033 - PB1D7 SINE Alu -61 59 3 8 1133 183 42 0 0 chr17 71868631 71868655 -23403996 + (TG)n Simple_repeat Simple_repeat 1 24 0 8 1133 995 272 45 8 chr17 71868676 71868943 -23403708 + MTD LTR MaLR 1 277 -142 8 1133 686 217 21 7 chr17 71869124 71869268 -23403383 - B1_Mur1 SINE Alu -3 146 1 8 1133 284 235 132 63 chr17 71869332 71869491 -23403160 + MLT1A1 LTR MaLR 1 170 -238 8 1133 421 245 271 0 chr17 71869758 71869909 -23402742 - B3 SINE B2 -9 207 16 8 1133 217 319 97 0 chr17 71870604 71870676 -23401975 + ID4_ SINE ID 1 79 -4 8 1133 5704 67 9 4 chr17 71871124 71871929 -23400722 + RLTR22_Mus LTR ERVK 1 809 -999 8 1133 353 289 45 71 chr17 71872153 71872377 -23400274 + RMER12 LTR ERVK 1101 1318 -4 8 1133 295 318 12 0 chr17 71872374 71872459 -23400192 - RSINE1 SINE B4 -77 88 3 8 1133 276 318 84 0 chr17 71872477 71872656 -23399995 + Charlie1a DNA MER1_type 1250 1443 -12 8 1133 1222 121 26 0 chr17 71873237 71873427 -23399224 + B2_Mm2 SINE B2 1 195 0 8 1133 329 258 53 11 chr17 71873560 71873654 -23398997 - B1F SINE Alu -7 142 45 8 1133 864 96 71 43 chr17 71873847 71873988 -23398663 + B1_Mus1 SINE Alu 3 147 -1 8 1133 1452 70 37 0 chr17 71874276 71874463 -23398188 - B2_Mm2 SINE B2 0 195 2 8 1133 1451 55 133 12 chr17 71875285 71875526 -23397125 + BGLII_Mus LTR ERVK 153 422 0 8 1133 417 273 26 65 chr17 71876935 71877088 -23395563 + B1_Mur2 SINE Alu 1 147 -2 8 1133 1426 94 5 0 chr17 71878154 71878345 -23394306 - B2_Mm1t SINE B2 0 193 2 8 1133 3108 39 0 8 chr17 71878882 71879269 -23393382 - L1Md_F3 LINE L1 0 6584 6201 8 1133 319 302 31 0 chr17 71879334 71879430 -23393221 - ID_B1 SINE B4 -35 189 91 8 1133 486 264 0 24 chr17 71879510 71879634 -23393017 + RSINE1 SINE B4 28 148 -17 8 1133 1357 83 6 6 chr17 71880283 71880465 -23392186 - B2_Mm1a SINE B2 -8 185 4 8 1133 420 289 42 14 chr17 71880510 71880521 -23392130 + B1F1 SINE Alu 1 83 -66 8 1133 504 272 0 16 chr17 71880521 71880648 -23392003 + ID_B1 SINE B4 93 217 -7 8 1133 331 225 0 119 chr17 71880712 71880813 -23391838 - RSINE1 SINE B4 -48 117 29 8 1133 198 0 0 0 chr17 71881119 71881141 -23391510 + (T)n Simple_repeat Simple_repeat 1 22 0 8 1133 1034 65 51 0 chr17 71881291 71881429 -23391222 - B1_Mus2 SINE Alu -1 146 2 8 1133 189 0 0 0 chr17 71881429 71881450 -23391201 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 8 1133 341 216 144 0 chr17 71881464 71881561 -23391090 - B1F2 SINE Alu -28 121 11 8 1133 287 260 52 10 chr17 71881895 71881992 -23390659 - RSINE1 SINE B4 0 165 65 8 1133 499 248 35 7 chr17 71882187 71882329 -23390322 - ID_B1 SINE B4 0 224 79 8 1133 267 203 0 0 chr17 71882332 71882396 -23390255 + CT-rich Low_complexity Low_complexity 1 64 0 8 1133 786 267 35 5 chr17 71882420 71882623 -23390028 - B3 SINE B2 -6 210 2 8 1133 646 262 38 5 chr17 71883407 71883591 -23389060 - Ricksha_0 DNA MuDR -594 1139 950 8 1133 256 175 203 56 chr17 71883633 71883736 -23388915 - L1M3 LINE L1 -639 5544 5427 8 1133 467 319 79 16 chr17 71883739 71884122 -23388529 - L1MD LINE L1 -3179 2967 2558 8 1133 1718 118 28 7 chr17 71884126 71884397 -23388254 + RMER6B LTR ERVK 3 279 -182 8 1133 1551 138 7 7 chr17 71884397 71884668 -23387983 - RLTR15 LTR ERVK 0 359 89 8 1133 1637 47 0 0 chr17 71885154 71885346 -23387305 + B2_Mm1a SINE B2 1 192 -1 8 1133 30 45 0 0 chr17 71885394 71885438 -23387213 + AT_rich Low_complexity Low_complexity 1 44 0 8 1133 689 281 60 5 chr17 71885438 71885638 -23387013 - B3 SINE B2 -5 211 1 8 1133 1128 55 7 7 chr17 71886070 71886217 -23386434 - B1_Mm SINE Alu 0 147 1 8 1133 247 312 0 0 chr17 71886322 71886386 -23386265 + (TG)n Simple_repeat Simple_repeat 1 64 0 8 1133 587 196 0 0 chr17 71887331 71887438 -23385213 - B3 SINE B2 -109 107 1 8 1133 1180 48 7 20 chr17 71887475 71887624 -23385027 + B1_Mus2 SINE Alu 1 147 0 8 1133 292 262 0 24 chr17 71888021 71888103 -23384548 - L1M4 LINE L1 -510 5664 5585 8 1133 307 309 119 85 chr17 71888557 71888851 -23383800 - ORR1E LTR MaLR -23 336 33 8 1133 595 322 0 0 chr17 71888907 71889056 -23383595 + RSINE1 SINE B4 3 151 -14 8 1133 270 262 16 0 chr17 71889627 71889688 -23382963 + tRNA-Ala-GCY_ tRNA tRNA 2 63 -12 8 1133 2168 115 165 35 chr17 71891306 71891711 -23380940 - RMER6B LTR ERVK -2 459 2 8 1133 361 234 39 0 chr17 71891896 71891973 -23380678 - ID_B1 SINE B4 0 224 145 8 1133 226 306 58 58 chr17 71891906 71892010 -23380641 - B1F1 SINE Alu -10 139 36 8 1133 224 143 23 23 chr17 71892022 71892065 -23380586 - PB1 SINE Alu 0 127 85 8 1133 502 287 48 70 chr17 71892352 71892682 -23379969 + MER33 DNA MER1_type 1 323 -1 8 1133 31 0 0 0 chr17 71892985 71893016 -23379635 + AT_rich Low_complexity Low_complexity 1 31 0 8 1133 23 0 0 0 chr17 71893171 71893194 -23379457 + AT_rich Low_complexity Low_complexity 1 23 0 8 1133 1329 88 11 0 chr17 71893197 71893379 -23379272 + B2_Mm1t SINE B2 2 185 -8 8 1133 351 295 119 11 chr17 71894527 71894712 -23377939 + B4A SINE B4 77 281 -11 8 1133 1102 58 0 7 chr17 71895228 71895367 -23377284 + B1_Mm SINE Alu 1 138 -9 8 1133 7159 68 5 5 chr17 71895414 71895660 -23376991 - L1_Mm LINE L1 -2244 3639 3393 8 1133 4272 70 27 34 chr17 71895660 71896251 -23376400 + LTRIS_Mus LTR ERV1 1 587 0 8 1133 7159 68 5 5 chr17 71896251 71897012 -23375639 - L1_Mm LINE L1 -2491 3392 2632 8 1133 7901 41 1 36 chr17 71897012 71898026 -23374625 + L1Md_F2 LINE L1 5595 6572 -10 8 1133 22 0 0 0 chr17 71898026 71898048 -23374603 + AT_rich Low_complexity Low_complexity 1 22 0 8 1133 1252 34 0 0 chr17 71898375 71898522 -23374129 - B1_Mus1 SINE Alu 0 148 2 8 1133 269 238 225 13 chr17 71898919 71899009 -23373642 - B1F SINE Alu -9 108 2 8 1133 352 216 65 98 chr17 71899130 71899173 -23373478 - B3 SINE B2 0 195 151 8 1133 447 63 0 0 chr17 71899173 71899236 -23373415 + (TATG)n Simple_repeat Simple_repeat 4 66 0 8 1133 352 231 132 0 chr17 71899236 71899315 -23373336 - B3 SINE B2 -48 168 78 8 1133 970 243 98 34 chr17 71899435 71899763 -23372888 - RLTR15 LTR ERVK -10 349 1 8 1133 1128 58 0 0 chr17 71899922 71900060 -23372591 + B1_Mm SINE Alu 1 138 -9 8 1133 207 0 0 0 chr17 71900060 71900083 -23372568 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 1133 836 235 98 0 chr17 71900182 71900365 -23372286 - B3 SINE B2 -14 202 2 8 1133 21 0 0 0 chr17 71901493 71901514 -23371137 + GC_rich Low_complexity Low_complexity 1 21 0 8 1133 321 89 0 0 chr17 71901975 71902020 -23370631 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 1133 450 258 119 58 chr17 71902252 71902478 -23370173 - RMER15 LTR ERVL 0 575 336 8 1133 206 185 88 44 chr17 71902747 71902815 -23369836 - L3 LINE CR1 -1639 2850 2780 8 1133 322 322 122 14 chr17 71903321 71903469 -23369182 - HAL1-3A_ME LINE L1 -402 2456 2293 8 1133 185 196 22 0 chr17 71903469 71903515 -23369136 + CT-rich Low_complexity Low_complexity 3 49 0 8 1133 831 258 12 0 chr17 71903564 71903727 -23368924 - B3 SINE B2 -51 165 1 8 1133 448 228 146 23 chr17 71903753 71903910 -23368741 + Charlie5 DNA MER1_type 1 177 -2447 8 1133 961 143 0 20 chr17 71903910 71904060 -23368591 - B1_Mur4 SINE Alu -2 148 2 8 1133 448 228 146 23 chr17 71904060 71904073 -23368578 + Charlie5 DNA MER1_type 178 192 -2432 8 1133 255 271 104 17 chr17 71904103 71904276 -23368375 + Charlie5 DNA MER1_type 2359 2546 -78 8 1133 211 304 179 1 chr17 71904263 71904336 -23368315 - BC1_Mm scRNA scRNA -65 87 2 8 1133 676 201 241 0 chr17 71904395 71904569 -23368082 + B3 SINE B2 1 216 0 8 1133 743 177 28 14 chr17 71905018 71905161 -23367490 + B1_Mur1 SINE Alu 1 145 -4 8 1133 721 247 20 7 chr17 71905931 71906078 -23366573 - RSINE1 SINE B4 -14 151 3 8 1133 21 0 0 0 chr17 71906724 71906745 -23365906 + AT_rich Low_complexity Low_complexity 1 21 0 8 1133 544 216 17 8 chr17 71906773 71906890 -23365761 - ID_B1 SINE B4 -5 219 102 8 1133 23 33 0 0 chr17 71907060 71907090 -23365561 + AT_rich Low_complexity Low_complexity 1 30 0 8 1133 766 141 87 22 chr17 71907249 71907387 -23365264 - B1_Mur1 SINE Alu 0 149 3 8 1133 751 233 6 63 chr17 71908182 71908356 -23364295 - RSINE1 SINE B4 0 165 2 8 1133 447 250 101 9 chr17 71908837 71908946 -23363705 + B3A SINE B2 1 119 -79 8 1133 360 0 0 0 chr17 71908954 71908994 -23363657 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 1133 24 0 0 0 chr17 71908995 71909019 -23363632 + AT_rich Low_complexity Low_complexity 1 24 0 8 1133 1262 28 0 0 chr17 71909084 71909228 -23363423 - B1_Mus2 SINE Alu 0 147 4 8 1133 400 284 86 0 chr17 71909275 71909391 -23363260 - B1_Mur1 SINE Alu -19 130 5 8 1133 713 243 69 42 chr17 71909773 71909962 -23362689 + B3A SINE B2 1 194 -4 8 1133 430 82 0 0 chr17 71909971 71910032 -23362619 + B2_Mm2 SINE B2 1 61 -134 8 1133 1225 27 14 0 chr17 71910032 71910178 -23362473 + B1_Mus1 SINE Alu 1 148 0 8 1133 197 97 63 16 chr17 71910178 71910241 -23362410 + (CAAA)n Simple_repeat Simple_repeat 3 68 0 9 1133 506 93 361 0 chr17 71910245 71910353 -23362298 + B2_Mm2 SINE B2 46 192 -3 8 1133 563 289 31 8 chr17 71910355 71910484 -23362167 - B3 SINE B2 -84 132 1 9 1133 1088 126 39 0 chr17 71910872 71911054 -23361597 - B2_Mm2 SINE B2 -6 189 1 9 1133 224 30 30 0 chr17 71911478 71911511 -23361140 + (CAA)n Simple_repeat Simple_repeat 3 36 0 9 1133 195 170 0 0 chr17 71912197 71912244 -23360407 + CT-rich Low_complexity Low_complexity 1 47 0 9 1133 810 155 42 0 chr17 71912294 71912436 -23360215 - B1_Mur3 SINE Alu 0 149 2 9 1133 1089 88 0 7 chr17 71912476 71912624 -23360027 + B1_Mus2 SINE Alu 1 147 0 9 1133 1344 73 23 0 chr17 71912633 71912810 -23359841 - B2_Mm2 SINE B2 -14 181 1 9 1133 326 293 0 0 chr17 71913112 71913187 -23359464 + ID4_ SINE ID 2 76 -7 9 1133 844 190 0 0 chr17 71913200 71913337 -23359314 - B1_Mus1 SINE Alu -11 137 1 9 1133 252 338 14 0 chr17 71913407 71913478 -23359173 + ID4_ SINE ID 1 72 -11 9 1133 225 343 14 0 chr17 71913416 71913486 -23359165 + tRNA-Ala-GCY_ tRNA tRNA 4 74 -1 9 1133 896 147 161 17 chr17 71913620 71913800 -23358851 + B3 SINE B2 1 206 -10 9 1133 873 121 56 14 chr17 71914099 71914242 -23358409 - B1_Mur4 SINE Alu 0 150 2 9 1133 351 0 0 0 chr17 71914274 71914313 -23358338 + (TC)n Simple_repeat Simple_repeat 2 40 0 9 1133 1196 21 20 14 chr17 71914324 71914470 -23358181 - B1_Mus2 SINE Alu 0 147 1 9 1133 356 275 75 0 chr17 71914566 71914646 -23358005 + B1F1 SINE Alu 2 87 -62 9 1133 518 184 101 31 chr17 71915143 71915272 -23357379 - ID_B1 SINE B4 0 224 87 9 1133 223 249 2 31 chr17 71915338 71915403 -23357248 + PB1 SINE Alu 59 145 -5 9 1133 469 269 74 25 chr17 71915763 71915885 -23356766 + B1F SINE Alu 11 138 -11 9 1133 461 183 179 17 chr17 71915914 71916031 -23356620 + B1_Mur2 SINE Alu 14 149 0 9 1133 22 35 0 0 chr17 71916598 71916627 -23356024 + AT_rich Low_complexity Low_complexity 1 29 0 9 1133 1063 97 7 0 chr17 71916631 71916775 -23355876 - B1_Mus1 SINE Alu -2 146 2 9 1133 698 236 24 82 chr17 71916816 71917024 -23355627 - B3A SINE B2 -1 197 2 9 1133 216 86 0 0 chr17 71917095 71917130 -23355521 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 1133 645 277 0 0 chr17 71917233 71917370 -23355281 - ID_B1 SINE B4 0 224 88 9 1133 327 198 69 10 chr17 71917375 71917477 -23355174 - L1MEc LINE L1 -4904 1496 1389 9 1133 923 158 209 0 chr17 71917558 71917735 -23354916 + B3 SINE B2 3 216 0 9 1133 300 192 137 0 chr17 71917776 71917849 -23354802 - L1MEc LINE L1 -5486 914 832 9 1133 441 326 102 25 chr17 71917849 71918211 -23354440 + L1MEc LINE L1 406 795 -5605 9 1133 23 0 0 0 chr17 71919054 71919077 -23353574 + AT_rich Low_complexity Low_complexity 1 23 0 9 1133 26 0 0 0 chr17 71919773 71919799 -23352852 + AT_rich Low_complexity Low_complexity 1 26 0 9 1133 579 214 91 8 chr17 71919799 71919931 -23352720 - B1_Mur2 SINE Alu -5 144 2 9 1133 535 213 4 21 chr17 71920551 71920661 -23351990 + PB1D10 SINE Alu 9 119 -1 9 1133 214 335 217 42 chr17 71920742 71921097 -23351554 + L2a LINE L2 1901 2317 -1102 9 1133 675 294 0 6 chr17 71921100 71921264 -23351387 + B3A SINE B2 1 163 -35 9 1133 420 316 105 43 chr17 71921308 71921548 -23351103 + L2a LINE L2 2367 2624 -795 9 1133 886 193 68 44 chr17 71921548 71921754 -23350897 + B3 SINE B2 1 211 -5 9 1133 420 316 105 43 chr17 71921754 71921817 -23350834 + L2a LINE L2 2625 2688 -731 9 1133 409 240 0 0 chr17 71921861 71921936 -23350715 + ID4_ SINE ID 9 83 0 9 1133 831 271 6 11 chr17 71922038 71922221 -23350430 - B3 SINE B2 -34 182 1 9 1133 327 309 81 18 chr17 71922223 71922424 -23350227 + L2a LINE L2 2838 3057 -362 9 1133 813 124 87 7 chr17 71922453 71922591 -23350060 - B1_Mur3 SINE Alu 0 149 1 9 1133 1127 44 15 0 chr17 71922695 71922832 -23349819 - B1_Mus1 SINE Alu -8 140 2 9 1133 324 357 43 0 chr17 71922855 71922995 -23349656 - Lx7 LINE L1 -433 7263 7118 9 1133 1665 198 68 6 chr17 71923205 71923556 -23349095 + ORR1D1 LTR MaLR 1 373 -1 9 1133 222 328 110 16 chr17 71923570 71923697 -23348954 - MIRb SINE MIR -61 207 69 9 1133 827 157 7 52 chr17 71923968 71924123 -23348528 - B1_Mur2 SINE Alu 0 149 2 9 1133 23 0 0 0 chr17 71924241 71924264 -23348387 + AT_rich Low_complexity Low_complexity 1 23 0 9 1133 785 245 84 11 chr17 71924267 71924295 -23348356 - B3 SINE B2 -12 204 166 9 1133 366 23 0 0 chr17 71924295 71924338 -23348313 + (TATG)n Simple_repeat Simple_repeat 2 44 0 9 1133 785 245 84 11 chr17 71924338 71924499 -23348152 - B3 SINE B2 -51 165 1 9 1133 697 19 47 0 chr17 71924608 71924715 -23347936 + (TG)n Simple_repeat Simple_repeat 2 113 0 9 1133 260 181 14 14 chr17 71925238 71925311 -23347340 - L1_Rod LINE L1 -1667 4180 4108 9 1133 721 175 84 42 chr17 71925411 71925540 -23347111 + B1_Mur1 SINE Alu 1 140 -9 9 1133 180 0 0 0 chr17 71925540 71925560 -23347091 + (ATG)n Simple_repeat Simple_repeat 2 21 0 9 1133 721 175 84 42 chr17 71925560 71925573 -23347078 + B1_Mur1 SINE Alu 141 149 0 9 1133 1999 94 73 13 chr17 71925671 71925972 -23346679 - ORR1A2 LTR MaLR -8 319 1 9 1133 373 133 83 0 chr17 71925988 71926048 -23346603 + B1_Mur3 SINE Alu 77 141 -8 9 1133 530 295 84 37 chr17 71926367 71926582 -23346069 - MIRb SINE MIR -15 253 29 9 1133 271 232 153 31 chr17 71926624 71926722 -23345929 - MIR SINE MIR -49 213 104 9 1133 24 96 0 0 chr17 71926826 71926899 -23345752 + AT_rich Low_complexity Low_complexity 1 73 0 9 1133 309 157 221 11 chr17 71926902 71926992 -23345659 + PB1D9 SINE Alu 13 119 -1 9 1133 603 187 145 8 chr17 71927211 71927335 -23345316 - B1_Mus1 SINE Alu -2 146 6 9 1133 914 114 42 14 chr17 71928408 71928550 -23344101 + B1_Mus1 SINE Alu 3 148 0 9 1133 1131 135 172 0 chr17 71928727 71928919 -23343732 - URR1B DNA MER1_type 0 225 1 9 1133 180 0 0 0 chr17 71929124 71929144 -23343507 + (T)n Simple_repeat Simple_repeat 1 20 0 9 1133 1174 54 0 20 chr17 71929160 71929310 -23343341 + B1_Mus2 SINE Alu 1 147 0 9 1133 248 329 179 13 chr17 71929351 71929502 -23343149 - MIRb SINE MIR -89 179 4 9 1133 445 261 97 42 chr17 71929818 71929962 -23342689 + RSINE1 SINE B4 14 165 0 9 1133 234 208 0 0 chr17 71929981 71930034 -23342617 + GA-rich Low_complexity Low_complexity 3 55 0 9 1133 195 42 0 0 chr17 71930188 71930212 -23342439 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 9 1133 621 184 39 16 chr17 71930213 71930237 -23342414 - B1F2 SINE Alu -10 139 115 9 1133 252 0 0 0 chr17 71930237 71930265 -23342386 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 9 1133 682 129 0 0 chr17 71930265 71930367 -23342284 - PB1D9 SINE Alu -35 114 10 9 1133 538 248 118 16 chr17 71930782 71930909 -23341742 - B1_Mur1 SINE Alu -2 147 8 9 1133 927 242 10 40 chr17 71931228 71931430 -23341221 - B3 SINE B2 -20 196 1 9 1133 2967 134 10 108 chr17 71931820 71932405 -23340246 - RLTR12B LTR ERVK 0 528 1 9 1133 219 308 51 0 chr17 71932424 71932502 -23340149 + ID4_ SINE ID 2 83 0 9 1133 328 323 0 10 chr17 71932584 71932681 -23339970 + PB1D7 SINE Alu 24 119 -1 9 1133 771 177 8 0 chr17 71932845 71932975 -23339676 + B1_Mus1 SINE Alu 6 136 -12 9 1133 486 259 43 0 chr17 71933308 71933424 -23339227 + ID_B1 SINE B4 85 205 -19 9 1133 333 280 30 25 chr17 71933472 71933573 -23339078 + PB1D7 SINE Alu 17 114 -34 9 1133 192 323 71 20 chr17 71933903 71934001 -23338650 + L2 LINE L2 2760 2862 -557 9 1133 689 240 60 7 chr17 71934039 71934188 -23338463 + ID_B1 SINE B4 2 158 -66 9 1133 976 41 8 0 chr17 71934188 71934311 -23338340 + B1_Mus1 SINE Alu 3 126 -22 9 1133 263 231 20 71 chr17 71934226 71934324 -23338327 + RLTR25B LTR ERVK 441 533 -495 9 1133 182 321 56 56 chr17 71934382 71934471 -23338180 + L2 LINE L2 2876 2964 -455 9 1133 664 138 37 0 chr17 71934595 71934704 -23337947 - B1_Mur2 SINE Alu -14 135 23 9 1133 1500 258 220 8 chr17 71934763 71935290 -23337361 - Lx8 LINE L1 -118 7355 6717 9 1133 298 201 113 72 chr17 71935290 71935373 -23337278 - PB1D7 SINE Alu -19 108 10 9 1133 381 191 231 22 chr17 71935522 71935613 -23337038 + PB1D7 SINE Alu 10 119 -1 9 1133 667 240 96 59 chr17 71935702 71935941 -23336710 - Lx8 LINE L1 -763 6710 6463 9 1133 1163 75 0 0 chr17 71936030 71936177 -23336474 - B1_Mus1 SINE Alu 0 148 2 9 1133 490 250 129 0 chr17 71936341 71936457 -23336194 + B1F SINE Alu 10 140 -9 9 1133 357 309 36 0 chr17 71936514 71936624 -23336027 + PB1D10 SINE Alu 1 114 -3 9 1133 464 302 47 41 chr17 71936554 71936632 -23336019 + ID SINE ID 1 79 -145 9 1133 485 254 25 34 chr17 71936632 71936750 -23335901 + PB1D10 SINE Alu 1 117 0 9 1133 29 0 0 0 chr17 71936882 71936911 -23335740 + AT_rich Low_complexity Low_complexity 1 29 0 9 1133 261 0 0 0 chr17 71936956 71936985 -23335666 + (TTG)n Simple_repeat Simple_repeat 2 30 0 9 1133 351 231 119 193 chr17 71936989 71937300 -23335351 - B4 SINE B4 -3 289 2 9 1133 648 0 0 0 chr17 71937337 71937409 -23335242 + (TC)n Simple_repeat Simple_repeat 1 72 0 9 1133 903 114 15 0 chr17 71937409 71937540 -23335111 - B1_Mm SINE Alu -14 133 1 9 1133 567 235 20 0 chr17 71937588 71937690 -23334961 + PB1D10 SINE Alu 4 107 -10 9 1133 215 170 0 41 chr17 71937801 71937850 -23334801 + GA-rich Low_complexity Low_complexity 3 49 0 9 1133 1151 102 0 0 chr17 71938943 71939100 -23333551 + B2_Mm2 SINE B2 2 158 -37 9 1133 180 0 0 0 chr17 71939101 71939121 -23333530 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 9 1133 30 83 0 0 chr17 71939121 71939193 -23333458 + AT_rich Low_complexity Low_complexity 1 72 0 9 1133 305 24 24 0 chr17 71939720 71939762 -23332889 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 9 1133 958 124 13 27 chr17 71940003 71940152 -23332499 - B1_Mus1 SINE Alu 0 148 2 1 1133 321 209 144 62 chr17 71940200 71940297 -23332354 + B1F SINE Alu 38 142 -7 1 1133 1911 164 166 44 chr17 71940325 71940848 -23331803 + RMER1B Other Other 476 1062 -4 1 1133 1219 28 7 0 chr17 71940890 71941035 -23331616 + B1_Mus2 SINE Alu 2 147 0 1 1133 293 24 0 47 chr17 71941035 71941078 -23331573 + (CAAAAA)n Simple_repeat Simple_repeat 6 46 0 1 1133 346 282 0 0 chr17 71941084 71941155 -23331496 + ID4 SINE ID 9 79 -4 1 1133 398 248 50 0 chr17 71941672 71941773 -23330878 + PB1D10 SINE Alu 3 108 -9 1 1133 626 224 41 20 chr17 71941831 71941977 -23330674 - B1F1 SINE Alu 0 149 1 1 1133 372 206 0 0 chr17 71942183 71942246 -23330405 + B1F2 SINE Alu 2 64 -85 1 1133 1581 219 133 87 chr17 71942247 71942743 -23329908 + RMER19C LTR ERVK 3 521 -90 1 1133 1027 61 9 28 chr17 71942734 71942901 -23329750 - B2_Mm2 SINE B2 -21 172 1 1 1133 680 169 8 16 chr17 71942901 71943018 -23329633 + RMER19C LTR ERVK 787 902 0 1 1133 601 135 0 0 chr17 71943018 71943105 -23329546 + B1_Mur2 SINE Alu 58 144 -5 1 1133 349 315 139 0 chr17 71943127 71943235 -23329416 - RSINE1 SINE B4 -13 152 30 1 1133 21 0 0 0 chr17 71943953 71943974 -23328677 + AT_rich Low_complexity Low_complexity 1 21 0 1 1133 373 296 167 0 chr17 71944079 71944187 -23328464 - B1F1 SINE Alu -21 128 3 1 1133 627 257 20 7 chr17 71944261 71944414 -23328237 - B4A SINE B4 -5 287 133 1 1133 472 217 66 16 chr17 71945104 71945226 -23327425 - ID_B1 SINE B4 -7 217 90 1 1133 992 161 29 8 chr17 71945281 71945636 -23327015 + GA-rich Low_complexity Low_complexity 1 362 0 1 1133 846 162 43 60 chr17 71945644 71945828 -23326823 + B2_Mm2 SINE B2 2 182 -13 1 1133 803 123 72 7 chr17 71945831 71945970 -23326681 + B1_Mur3 SINE Alu 2 149 0 1 1133 419 125 14 0 chr17 71945976 71946048 -23326603 + (GGA)n Simple_repeat Simple_repeat 3 75 0 1 1133 279 276 80 20 chr17 71946091 71946191 -23326460 - B1_Mur1 SINE Alu -43 106 1 1 1133 227 329 12 0 chr17 71946268 71946350 -23326301 + Lx8 LINE L1 7019 7101 -372 1 1133 225 247 237 0 chr17 71946654 71946751 -23325900 + RMER15 LTR ERVL 441 560 -15 1 1133 280 250 11 81 chr17 71946726 71946751 -23325900 - ID SINE ID -142 82 2 1 1133 284 233 0 32 chr17 71946751 71946813 -23325838 - ID4 SINE ID -22 61 2 1 1133 352 231 110 8 chr17 71946886 71947004 -23325647 + RSINE1 SINE B4 1 130 -35 1 1133 637 40 0 0 chr17 71948610 71948684 -23323967 + tRNA-Cys-TGY tRNA tRNA 1 74 -1 1 1133 228 183 493 0 chr17 71948693 71948764 -23323887 + B1_Mur2 SINE Alu 10 115 -34 1 1133 1156 56 14 0 chr17 71948915 71949059 -23323592 + B1_Mus2 SINE Alu 1 146 -1 1 1133 323 252 0 48 chr17 71949388 71949492 -23323159 + B4 SINE B4 6 104 -188 1 1133 228 266 0 99 chr17 71949624 71949695 -23322956 + B4 SINE B4 85 148 -144 1 1133 261 0 0 0 chr17 71950116 71950145 -23322506 + (TTTTTG)n Simple_repeat Simple_repeat 1 29 0 1 1133 801 183 7 0 chr17 71950145 71950287 -23322364 - B1_Mus1 SINE Alu 0 148 6 1 1133 306 0 0 0 chr17 71950302 71950336 -23322315 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1133 348 111 0 0 chr17 71950348 71950402 -23322249 + (TTTC)n Simple_repeat Simple_repeat 3 56 0 1 1133 1164 75 0 0 chr17 71950402 71950549 -23322102 - B1_Mus1 SINE Alu 0 148 2 1 1133 378 230 14 0 chr17 71951249 71951323 -23321328 + BC1_Mm scRNA scRNA 1 75 -77 1 1133 765 177 49 7 chr17 71951332 71951474 -23321177 + B1_Mur2 SINE Alu 1 148 -1 1 1133 330 179 105 95 chr17 71951498 71951603 -23321048 + B3A SINE B2 55 160 -38 1 1133 6919 137 71 36 chr17 71951675 71952626 -23320025 - Lx5 LINE L1 -199 6851 5829 1 1133 3741 186 76 63 chr17 71952626 71953523 -23319128 + RMER13B LTR ERVK 1 908 0 1 1133 6919 125 55 5 chr17 71953523 71953957 -23318694 - Lx5 LINE L1 -27 5850 5395 1 1133 339 308 65 10 chr17 71954010 71954174 -23318477 - L1MA9 LINE L1 -313 5978 5808 1 1133 2319 113 3 0 chr17 71954175 71954501 -23318150 - ORR1A2 LTR MaLR 0 327 1 1 1133 9942 132 60 17 chr17 71954501 71956360 -23316291 - ORR1A2-int LTR MaLR 0 1963 24 1 1133 1150 44 0 0 chr17 71956376 71956512 -23316139 + B1_Mus1 SINE Alu 1 136 -12 1 1133 258 32 0 0 chr17 71956514 71956545 -23316106 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 1 1133 2190 120 34 90 chr17 71956562 71957038 -23315613 + RLTR24 LTR ERV1 47 495 -34 1 1133 414 0 0 0 chr17 71957039 71957085 -23315566 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1133 697 164 0 79 chr17 71957089 71957228 -23315423 - B1_Mur4 SINE Alu -22 128 1 1 1133 1233 268 61 63 chr17 71957231 71957741 -23314910 - L1MA9 LINE L1 -486 5826 5318 1 1133 872 150 0 7 chr17 71957746 71957887 -23314764 - B1_Mus2 SINE Alu 0 147 8 1 1133 389 234 68 62 chr17 71957774 71957920 -23314731 - MT2B LTR ERVL -323 278 132 1 1133 415 275 17 0 chr17 71958379 71958499 -23314152 - RSINE1 SINE B4 -35 130 9 1 1134 348 154 0 58 chr17 71958669 71958738 -23313913 + RLTR33 LTR ERVK 1 65 -613 1 1134 1750 144 188 22 chr17 71958733 71959095 -23313556 + RLTR33 LTR ERVK 257 678 0 1 1134 277 296 8 85 chr17 71959215 71959333 -23313318 + PB1D10 SINE Alu 9 117 0 1 1134 198 143 0 0 chr17 71959425 71959460 -23313191 + (GGAA)n Simple_repeat Simple_repeat 1 35 0 1 1134 924 217 65 10 chr17 71959460 71959660 -23312991 + B3 SINE B2 2 212 -4 1 1134 1107 199 19 0 chr17 71959683 71959889 -23312762 + B3 SINE B2 1 210 -6 1 1134 713 284 20 0 chr17 71960000 71960204 -23312447 - B3 SINE B2 -7 209 2 1 1134 333 0 0 0 chr17 71960248 71960285 -23312366 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1134 725 163 0 0 chr17 71960314 71960437 -23312214 - B2_Mm2 SINE B2 -71 124 2 1 1134 1090 69 7 14 chr17 71960535 71960682 -23311969 + B1_Mus1 SINE Alu 1 146 -2 1 1134 247 354 20 0 chr17 71960728 71960827 -23311824 - MLT1B LTR MaLR 0 390 290 1 1134 235 233 68 14 chr17 71960888 71960962 -23311689 - ID4_ SINE ID -4 79 2 1 1134 477 0 0 0 chr17 71960999 71961052 -23311599 + (TCTA)n Simple_repeat Simple_repeat 1 53 0 1 1134 767 21 0 0 chr17 71961074 71961169 -23311482 - B2_Mm2 SINE B2 -99 96 2 1 1134 412 231 193 17 chr17 71961191 71961310 -23311341 - B1_Mur2 SINE Alu -1 148 9 1 1134 1148 68 0 7 chr17 71961421 71961569 -23311082 - B1_Mus1 SINE Alu 0 148 2 1 1134 195 69 0 0 chr17 71961572 71961601 -23311050 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 1134 5386 164 2 16 chr17 71962217 71962838 -23309813 + Lx2 LINE L1 4963 5577 -309 1 1134 4742 47 17 3 chr17 71962838 71963417 -23309234 + LTRIS_Mus LTR ERV1 1 587 0 1 1134 6712 104 29 6 chr17 71963417 71964699 -23307952 + Lx2 LINE L1 5578 6993 -4 1 1134 269 245 36 73 chr17 71964753 71964863 -23307788 - PB1D9 SINE Alu -1 119 14 1 1134 186 133 0 0 chr17 71964884 71964914 -23307737 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1134 261 0 0 0 chr17 71964914 71964943 -23307708 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1134 1215 35 7 0 chr17 71964947 71965092 -23307559 - B1_Mus1 SINE Alu 0 148 3 1 1134 23 68 0 0 chr17 71965948 71965992 -23306659 + GC_rich Low_complexity Low_complexity 1 44 0 1 1134 342 247 13 0 chr17 71967564 71967641 -23305010 + ID4_ SINE ID 3 80 -3 1 1134 291 85 0 0 chr17 71968205 71968252 -23304399 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1 1134 781 44 80 0 chr17 71968252 71968365 -23304286 - B1_Mus1 SINE Alu -25 123 2 1 1134 3096 71 13 0 chr17 71969118 71969513 -23303138 + MTB LTR MaLR 1 400 0 1 1134 406 200 83 37 chr17 71969821 71969930 -23302721 - B1_Mur4 SINE Alu -1 149 36 1 1134 1111 63 145 0 chr17 71970094 71970253 -23302398 - B2_Mm1a SINE B2 -9 184 3 1 1134 1008 75 181 0 chr17 71970606 71970766 -23301885 - B2_Mm1t SINE B2 -4 189 1 1 1134 334 335 66 30 chr17 71970914 71971080 -23301571 + B3A SINE B2 1 172 -26 1 1134 618 176 73 7 chr17 71971718 71971855 -23300796 - B1_Mur4 SINE Alu 0 150 5 1 1134 1257 85 51 11 chr17 71971996 71972174 -23300477 + B2_Mm2 SINE B2 2 186 -9 1 1134 569 191 51 96 chr17 71972176 71972332 -23300319 - B1_Mur2 SINE Alu 0 149 1 1 1134 23 54 0 0 chr17 71972801 71972838 -23299813 + AT_rich Low_complexity Low_complexity 1 37 0 1 1134 907 159 253 0 chr17 71972912 71973082 -23299569 + B3 SINE B2 1 213 -3 1 1134 216 0 0 0 chr17 71973325 71973349 -23299302 + (C)n Simple_repeat Simple_repeat 1 24 0 1 1134 545 239 66 22 chr17 71973619 71973756 -23298895 + B3 SINE B2 65 207 -9 1 1134 1177 48 0 7 chr17 71973845 71973992 -23298659 - B1_Mm SINE Alu 0 147 2 1 1134 323 170 87 81 chr17 71974004 71974121 -23298530 - PB1D10 SINE Alu 0 120 1 1 1134 281 344 8 8 chr17 71977461 71977587 -23295064 - HAL1 LINE L1 -1604 903 778 1 1134 735 214 34 77 chr17 71977725 71977933 -23294718 - B3 SINE B2 0 216 18 1 1134 315 207 19 26 chr17 71977958 71978060 -23294591 - B1_Mm SINE Alu -5 142 13 1 1134 1659 37 0 0 chr17 71978153 71978343 -23294308 - B2_Mm1a SINE B2 -2 191 2 1 1134 381 131 0 0 chr17 71978461 71978522 -23294129 + (TG)n Simple_repeat Simple_repeat 1 61 0 1 1134 301 278 131 31 chr17 71978522 71978682 -23293969 - B4A SINE B4 0 292 117 1 1134 239 241 17 17 chr17 71979695 71979754 -23292897 + BC1_Mm scRNA scRNA 9 67 -85 1 1134 271 258 48 0 chr17 71979701 71979763 -23292888 + ID SINE ID 14 78 -146 1 1134 180 152 0 0 chr17 71979777 71979810 -23292841 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1134 445 292 162 6 chr17 71979988 71980167 -23292484 + ID_B1 SINE B4 14 220 -4 1 1134 415 254 208 33 chr17 71980216 71980399 -23292252 + B3 SINE B2 2 216 0 1 1134 700 118 0 18 chr17 71980737 71980849 -23291802 + B1_Mus2 SINE Alu 38 147 0 1 1134 273 229 58 37 chr17 71980876 71980980 -23291671 + B1F SINE Alu 10 114 -13 1 1134 459 0 0 0 chr17 71980984 71981035 -23291616 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1 1134 380 172 186 213 chr17 71981837 71981952 -23290699 - B3 SINE B2 0 216 80 1 1134 504 0 0 0 chr17 71981952 71982008 -23290643 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1134 380 172 186 213 chr17 71982008 71982113 -23290538 - B3 SINE B2 -137 79 2 1 1134 388 327 52 23 chr17 71982127 71982299 -23290352 - B3 SINE B2 -27 189 13 1 1134 237 269 86 0 chr17 71982424 71982517 -23290134 + B4A SINE B4 1 101 -191 1 1134 527 192 176 0 chr17 71982518 71982643 -23290008 + B1_Mus1 SINE Alu 2 148 0 1 1134 342 259 64 71 chr17 71983158 71983299 -23289352 + B4A SINE B4 153 292 0 1 1134 441 290 82 58 chr17 71983371 71983598 -23289053 - B4A SINE B4 -12 280 49 1 1134 494 289 22 7 chr17 71983630 71983766 -23288885 - B1F1 SINE Alu -11 138 1 1 1134 382 291 81 14 chr17 71983783 71983992 -23288659 - ID_B1 SINE B4 0 224 2 1 1134 456 238 38 45 chr17 71984080 71984212 -23288439 - B4A SINE B4 -116 176 46 1 1134 374 216 22 22 chr17 71984210 71984300 -23288351 - B4A SINE B4 -202 90 1 1 1134 677 99 261 62 chr17 71984337 71984498 -23288153 - B2_Mm2 SINE B2 -1 194 2 1 1134 373 132 175 17 chr17 71984778 71984893 -23287758 - B2_Mm2 SINE B2 0 195 47 1 1134 201 74 0 0 chr17 71984911 71984938 -23287713 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 1 1134 867 62 77 0 chr17 71984949 71985079 -23287572 - B2_Mm2 SINE B2 -54 141 2 1 1134 223 293 12 12 chr17 71985533 71985616 -23287035 + B1_Mur3 SINE Alu 7 89 -60 1 1134 236 354 41 49 chr17 71985657 71985779 -23286872 - RSINE1 SINE B4 -44 121 1 1 1134 708 240 126 0 chr17 71986615 71986798 -23285853 - B3 SINE B2 -7 209 4 1 1134 456 19 0 0 chr17 71987370 71987423 -23285228 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1134 28 48 0 0 chr17 71988292 71988334 -23284317 + AT_rich Low_complexity Low_complexity 1 42 0 1 1134 1568 53 0 0 chr17 71988339 71988528 -23284123 - B2_Mm1a SINE B2 -3 190 2 1 1134 376 111 207 12 chr17 71988955 71989037 -23283614 - RLTR12B LTR ERVK 0 528 431 1 1134 328 183 0 0 chr17 71989103 71989163 -23283488 - RLTR12B LTR ERVK -468 60 1 1 1134 22 35 0 0 chr17 71991082 71991111 -23281540 + AT_rich Low_complexity Low_complexity 1 29 0 1 1134 526 254 19 52 chr17 71991114 71991268 -23281383 - RSINE1 SINE B4 -11 154 6 1 1134 1290 87 54 0 chr17 71991390 71991575 -23281076 - B2_Mm2 SINE B2 0 195 1 1 1134 643 242 96 25 chr17 71991657 71991856 -23280795 - B3 SINE B2 -3 213 1 1 1134 476 272 167 5 chr17 71992347 71992539 -23280112 - Tigger16b DNA Tigger -52 285 63 1 1134 2390 62 0 6 chr17 71993511 71993822 -23278829 - L1Md_F2 LINE L1 0 6582 6274 1 1134 373 223 180 8 chr17 71993853 71993975 -23278676 + B1_Mur2 SINE Alu 2 144 -5 1 1134 254 305 0 24 chr17 71994000 71994084 -23278567 + PB1D10 SINE Alu 34 115 -2 1 1134 452 275 29 0 chr17 71994339 71994477 -23278174 - RSINE1 SINE B4 -21 144 3 1 1134 675 92 216 40 chr17 71994555 71994680 -23277971 - B1_Mus1 SINE Alu 0 148 2 1 1134 469 213 47 54 chr17 71995371 71995520 -23277131 - B1_Mur3 SINE Alu 0 149 2 1 1134 363 141 0 0 chr17 71995930 71995994 -23276657 + (TCCA)n Simple_repeat Simple_repeat 1 64 0 1 1134 216 204 37 0 chr17 71995996 71996050 -23276601 - PB1D10 SINE Alu -10 107 52 1 1134 211 216 0 0 chr17 71996175 71996212 -23276439 - ID_B1 SINE B4 -94 130 94 1 1134 221 234 35 5 chr17 71996923 71996991 -23275660 - PB1 SINE Alu -63 64 7 1 1134 1060 74 184 0 chr17 71997048 71997211 -23275440 + B2_Mm2 SINE B2 1 193 -2 1 1134 912 64 0 0 chr17 71997323 71997448 -23275203 - B1_Mm SINE Alu 0 147 23 1 1134 225 289 44 88 chr17 71999048 71999162 -23273489 - L1MB7 LINE L1 -138 6046 5938 1 1134 186 43 0 0 chr17 72000057 72000080 -23272571 + (CAT)n Simple_repeat Simple_repeat 3 25 0 1 1134 523 181 128 45 chr17 72000105 72000238 -23272413 - B1_Mur2 SINE Alu -1 148 5 2 1134 610 217 30 37 chr17 72000260 72000394 -23272257 + B1_Mur4 SINE Alu 18 150 0 3 1134 397 262 133 14 chr17 72000540 72000683 -23271968 - RSINE1 SINE B4 -2 163 4 4 1134 458 207 317 0 chr17 72000699 72000863 -23271788 - B3 SINE B2 0 216 1 5 1134 338 184 299 26 chr17 72000873 72000990 -23271661 - B1F2 SINE Alu 0 149 1 6 1134 2632 49 9 6 chr17 72003015 72003362 -23269289 - L1Md_F2 LINE L1 -4 6578 6231 7 1134 249 114 81 0 chr17 72003364 72003452 -23269199 - B2_Mm2 SINE B2 0 195 101 8 1134 450 212 81 0 chr17 72004871 72004970 -23267681 - PB1D9 SINE Alu -13 107 1 9 1134 273 57 0 0 chr17 72005004 72005039 -23267612 + (TATG)n Simple_repeat Simple_repeat 3 37 0 1 1134 315 0 0 0 chr17 72005113 72005148 -23267503 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1134 753 167 42 30 chr17 72005310 72005477 -23267174 - B2_Mm2 SINE B2 0 195 27 1 1134 1222 124 0 5 chr17 72005480 72005675 -23266976 + B2_Mm2 SINE B2 1 194 -1 1 1134 25 31 0 0 chr17 72006272 72006304 -23266347 + AT_rich Low_complexity Low_complexity 1 32 0 1 1134 963 130 0 7 chr17 72006315 72006462 -23266189 + B1_Mus1 SINE Alu 1 146 -2 1 1134 270 268 24 12 chr17 72006510 72006593 -23266058 + B1F SINE Alu 13 96 -53 1 1134 243 339 0 0 chr17 72006824 72006933 -23265718 + GA-rich Low_complexity Low_complexity 1 109 0 1 1134 534 58 0 44 chr17 72008707 72008797 -23263854 + (TCTA)n Simple_repeat Simple_repeat 2 87 0 1 1134 396 0 0 0 chr17 72009559 72009603 -23263048 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1134 245 149 315 9 chr17 72009603 72009711 -23262940 + Lx9 LINE L1 7503 7643 -1 2 1134 786 177 210 0 chr17 72009992 72010178 -23262473 + URR1B DNA MER1_type 1 225 0 2 1134 2104 84 29 0 chr17 72010491 72010800 -23261851 + ORR1A2 LTR MaLR 2 319 -8 2 1134 1113 253 40 40 chr17 72010963 72011280 -23261371 - MTEa LTR MaLR -49 321 12 2 1134 300 64 43 0 chr17 72011635 72011682 -23260969 - B3 SINE B2 -166 50 2 2 1134 432 260 17 96 chr17 72012699 72012736 -23259915 + B1_Mur2 SINE Alu 17 50 -99 2 1134 972 71 229 6 chr17 72012736 72012893 -23259758 + B2_Mm2 SINE B2 2 193 -2 2 1134 432 260 17 96 chr17 72012893 72012970 -23259681 + B1_Mur2 SINE Alu 51 122 -27 2 1134 433 254 59 31 chr17 72013339 72013485 -23259166 - ID_B1 SINE B4 0 224 74 2 1134 629 232 14 4 chr17 72013496 72013660 -23258991 - B3A SINE B2 0 216 50 2 1134 594 0 0 0 chr17 72013746 72013812 -23258839 + (TTCC)n Simple_repeat Simple_repeat 4 69 0 2 1134 393 22 0 0 chr17 72013821 72013867 -23258784 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 3 1134 539 192 19 9 chr17 72013868 72013973 -23258678 - B1_Mur1 SINE Alu -13 136 31 3 1134 265 154 62 0 chr17 72014128 72014193 -23258458 + GA-rich Low_complexity Low_complexity 4 72 0 3 1134 799 153 6 22 chr17 72014195 72014331 -23258320 + polypurine Low_complexity Low_complexity 2 135 0 3 1134 982 69 34 11 chr17 72014331 72014507 -23258144 + (GAA)n Simple_repeat Simple_repeat 1 180 0 3 1134 799 153 6 22 chr17 72014507 72014550 -23258101 + polypurine Low_complexity Low_complexity 136 177 0 3 1134 603 217 44 69 chr17 72014917 72015120 -23257531 - B3A SINE B2 0 198 1 3 1134 1188 58 93 6 chr17 72015137 72015309 -23257342 - B2_Mm2 SINE B2 -8 187 1 3 1134 23 0 0 0 chr17 72015358 72015381 -23257270 + AT_rich Low_complexity Low_complexity 1 23 0 3 1134 332 241 133 9 chr17 72015394 72015507 -23257144 - PB1 SINE Alu 0 127 1 3 1134 516 32 0 0 chr17 72015921 72015983 -23256668 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 1134 381 122 0 0 chr17 72016286 72016360 -23256291 + (GA)n Simple_repeat Simple_repeat 1 74 0 4 1134 1139 179 24 76 chr17 72017136 72017363 -23255288 + RMER6B LTR ERVK 1 214 -247 4 1134 1184 48 0 0 chr17 72017363 72017510 -23255141 + B1_Mus1 SINE Alu 2 148 0 4 1134 1139 179 24 76 chr17 72017510 72017572 -23255079 + RMER6B LTR ERVK 215 275 -186 4 1134 1069 193 25 111 chr17 72017556 72017836 -23254815 + RMER6B LTR ERVK 183 438 -23 4 1134 2254 143 32 17 chr17 72017936 72018348 -23254303 + MTC LTR MaLR 1 418 -3 4 1134 277 302 45 37 chr17 72018353 72018487 -23254164 - L1MDa LINE L1 -4804 1829 1695 4 1134 976 153 25 45 chr17 72018834 72019032 -23253619 + B2_Mm2 SINE B2 2 195 0 4 1134 211 264 53 46 chr17 72019203 72019334 -23253317 + (CCTAT)n Simple_repeat Simple_repeat 5 136 0 4 1134 1276 117 45 32 chr17 72020537 72020757 -23251894 + URR1B DNA MER1_type 1 223 -2 4 1134 602 197 0 24 chr17 72020945 72021070 -23251581 + B1_Mur1 SINE Alu 6 127 -22 4 1134 227 225 97 25 chr17 72021077 72021170 -23251481 + B1_Mur2 SINE Alu 47 148 -1 5 1134 260 111 22 0 chr17 72021170 72021215 -23251436 + (GAAAA)n Simple_repeat Simple_repeat 1 46 0 5 1134 387 211 112 51 chr17 72021411 72021445 -23251206 - ID_B1 SINE B4 -26 266 152 5 1134 559 178 127 0 chr17 72021445 72021563 -23251088 - B1_Mus2 SINE Alu 0 147 15 5 1134 387 211 112 51 chr17 72021563 72021582 -23251069 - ID_B1 SINE B4 -26 151 80 5 1134 189 0 0 0 chr17 72021809 72021830 -23250821 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1134 285 282 52 22 chr17 72022113 72022229 -23250422 - MIRb SINE MIR -118 150 26 5 1134 369 0 0 0 chr17 72022509 72022550 -23250101 + (TC)n Simple_repeat Simple_repeat 1 41 0 5 1134 245 238 102 45 chr17 72023232 72023320 -23249331 + MIRb SINE MIR 55 147 -121 5 1134 469 228 102 0 chr17 72023540 72023667 -23248984 - ID_B1 SINE B4 0 224 85 5 1134 312 354 71 28 chr17 72024268 72024521 -23248130 - L1ME3B LINE L1 -354 5886 5623 5 1134 572 266 12 48 chr17 72025148 72025314 -23247337 - RSINE1 SINE B4 0 165 6 6 1134 442 335 78 29 chr17 72025766 72026073 -23246578 + MLT1A LTR MaLR 4 325 -49 6 1134 1193 48 0 0 chr17 72026548 72026695 -23245956 - B1_Mus2 SINE Alu 0 147 1 6 1134 243 333 0 0 chr17 72026730 72026805 -23245846 - ID SINE ID -148 76 2 6 1134 2648 89 18 15 chr17 72026826 72027225 -23245426 + MTB LTR MaLR 1 400 0 6 1134 360 0 0 0 chr17 72027372 72027412 -23245239 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1134 308 211 0 0 chr17 72027941 72028017 -23244634 - PB1D10 SINE Alu -2 115 40 6 1134 287 200 69 8 chr17 72028035 72028166 -23244485 + (TA)n Simple_repeat Simple_repeat 1 139 0 6 1134 252 136 0 0 chr17 72028263 72028307 -23244344 - Lx8 LINE L1 -129 7344 7301 6 1134 274 281 27 88 chr17 72028374 72028522 -23244129 - Lx8 LINE L1 -418 7055 6917 6 1134 818 212 0 57 chr17 72028567 72028777 -23243874 - B3A SINE B2 0 198 1 7 1134 374 290 37 0 chr17 72028782 72028889 -23243762 - MIRb SINE MIR -81 187 77 7 1134 872 153 0 5 chr17 72028928 72029332 -23243319 + (TG)n Simple_repeat Simple_repeat 1 401 0 7 1134 258 292 16 55 chr17 72029338 72029465 -23243186 + MIRc SINE MIR 60 181 -87 7 1134 692 295 72 39 chr17 72029695 72029974 -23242677 - B4 SINE B4 0 292 5 7 1134 719 262 22 101 chr17 72030679 72030784 -23241867 - B4A SINE B4 -32 260 169 7 1134 544 191 231 22 chr17 72030784 72030966 -23241685 + URR1A DNA MER1_type 3 222 -4 7 1134 719 262 22 101 chr17 72030966 72031127 -23241524 - B4A SINE B4 -124 168 15 7 1134 353 39 0 19 chr17 72032403 72032455 -23240196 + (GTGTG)n Simple_repeat Simple_repeat 1 51 0 7 1134 1143 68 0 0 chr17 72035015 72035162 -23237489 + B1_Mus2 SINE Alu 1 147 0 7 1134 291 63 12 71 chr17 72035164 72035249 -23237402 + (CAAAA)n Simple_repeat Simple_repeat 1 80 0 7 1134 279 279 49 28 chr17 72035352 72035490 -23237161 - MIRc SINE MIR -30 178 44 8 1134 504 0 0 0 chr17 72035493 72035549 -23237102 + (TG)n Simple_repeat Simple_repeat 2 57 0 8 1134 24 32 0 0 chr17 72035727 72035758 -23236893 + AT_rich Low_complexity Low_complexity 1 31 0 8 1134 286 359 8 8 chr17 72035946 72036075 -23236576 - Lx7 LINE L1 -388 7308 7180 8 1134 212 284 27 13 chr17 72036621 72036696 -23235955 + GA-rich Low_complexity Low_complexity 5 80 0 8 1134 410 204 18 72 chr17 72037275 72037386 -23235265 + ID_B1 SINE B4 119 223 -1 8 1134 1331 70 11 16 chr17 72037484 72037674 -23234977 - B2_Mm1t SINE B2 -3 190 2 8 1134 452 310 91 113 chr17 72039167 72039520 -23233131 - ORR1E LTR MaLR -6 353 9 8 1134 333 0 0 0 chr17 72040232 72040269 -23232382 + (TG)n Simple_repeat Simple_repeat 1 37 0 8 1134 248 309 21 21 chr17 72040420 72040516 -23232135 + MIR3 SINE MIR 106 201 -7 8 1134 21 57 0 0 chr17 72040530 72040565 -23232086 + AT_rich Low_complexity Low_complexity 1 35 0 9 1134 493 294 15 0 chr17 72041251 72041387 -23231264 + Charlie23a DNA MER1_type 136 273 -66 9 1134 232 271 14 14 chr17 72041390 72041461 -23231190 + (TATG)n Simple_repeat Simple_repeat 1 71 0 9 1134 508 293 142 27 chr17 72041773 72042103 -23230548 - ORR1D2 LTR MaLR -1 369 2 9 1134 1087 74 0 0 chr17 72042995 72043143 -23229508 - B1_Mus1 SINE Alu 0 148 1 9 1134 274 304 83 40 chr17 72044275 72044552 -23228099 + B4A SINE B4 1 289 -3 9 1134 226 346 13 0 chr17 72046579 72046657 -23225994 - Charlie23a DNA MER1_type -79 260 182 9 1134 329 167 13 89 chr17 72046662 72046741 -23225910 + MIR3 SINE MIR 114 186 -22 9 1134 1008 117 0 0 chr17 72046833 72046987 -23225664 + (TGAA)n Simple_repeat Simple_repeat 1 154 0 9 1134 206 288 15 0 chr17 72048008 72048074 -23224577 + L2a LINE L2 859 925 -2494 9 1134 222 282 56 0 chr17 72048412 72048483 -23224168 + L2a LINE L2 2183 2257 -1162 9 1134 286 334 143 24 chr17 72048595 72048923 -23223728 + L2a LINE L2 2404 2770 -649 9 1134 1319 79 17 0 chr17 72049009 72049186 -23223465 - B2_Mm2 SINE B2 -14 181 2 1 1134 256 353 165 11 chr17 72049428 72049780 -23222871 + L2a LINE L2 3020 3425 -1 9 1134 231 36 0 0 chr17 72050733 72050761 -23221890 + (TCC)n Simple_repeat Simple_repeat 2 29 0 1 1134 270 306 98 45 chr17 72051114 72051360 -23221291 + MER113 DNA MER1_type 215 473 -48 1 1134 287 282 0 0 chr17 72051362 72051433 -23221218 + BC1_Mm scRNA scRNA 4 74 -78 1 1134 641 84 50 37 chr17 72051479 72051640 -23221011 + (TCTCTG)n Simple_repeat Simple_repeat 4 166 0 1 1134 207 0 0 0 chr17 72051640 72051663 -23220988 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 1134 990 48 0 0 chr17 72051663 72051787 -23220864 + (GA)n Simple_repeat Simple_repeat 1 124 0 1 1134 1183 83 60 11 chr17 72052566 72052749 -23219902 + B2_Mm1t SINE B2 1 192 -1 1 1134 235 254 103 15 chr17 72052830 72052898 -23219753 + PB1D10 SINE Alu 9 82 -35 1 1134 516 16 0 0 chr17 72052940 72053001 -23219650 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 1134 442 161 28 0 chr17 72053243 72053386 -23219265 + (TCTG)n Simple_repeat Simple_repeat 2 148 0 1 1134 348 175 16 0 chr17 72053387 72053450 -23219201 - ID4_ SINE ID -18 65 2 1 1134 432 55 0 0 chr17 72053915 72053970 -23218681 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1134 183 271 28 14 chr17 72054034 72054105 -23218546 + L3 LINE CR1 1612 1683 -2806 1 1134 288 0 0 0 chr17 72054312 72054344 -23218307 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1134 1012 232 55 8 chr17 72054492 72054741 -23217910 - ID_B1 SINE B4 -21 271 6 1 1134 740 303 39 98 chr17 72055813 72056171 -23216480 - ORR1E LTR MaLR -2 357 21 1 1134 501 17 0 0 chr17 72056668 72056726 -23215925 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 1134 690 162 0 0 chr17 72056886 72057046 -23215605 + (TG)n Simple_repeat Simple_repeat 1 160 0 1 1134 226 349 36 9 chr17 72057642 72057752 -23214899 + MIR SINE MIR 110 222 -40 1 1134 204 331 53 64 chr17 72059599 72059770 -23212881 - L2 LINE L2 -412 3007 2839 1 1134 192 143 0 0 chr17 72059773 72059815 -23212836 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1134 289 338 84 33 chr17 72060423 72060637 -23212014 - L2 LINE L2 -718 2701 2477 1 1134 1027 259 44 123 chr17 72060851 72061256 -23211395 - MTE2a LTR MaLR -1 378 6 1 1134 241 330 11 0 chr17 72061843 72061934 -23210717 + Kanga1c DNA Tc2 307 398 -331 1 1134 276 296 0 0 chr17 72062368 72062449 -23210202 - B3A SINE B2 -22 176 96 1 1134 283 28 0 0 chr17 72062920 72062956 -23209695 + B3A SINE B2 1 36 -162 1 1134 355 294 131 14 chr17 72063060 72063205 -23209446 + B3 SINE B2 42 203 -13 1 1134 331 237 11 0 chr17 72063329 72063422 -23209229 + L1ME4a LINE L1 5957 6050 -74 1 1134 215 328 48 8 chr17 72063777 72063903 -23208748 + MIRc SINE MIR 53 183 -85 1 1134 249 212 14 96 chr17 72065265 72065338 -23207313 + ID4 SINE ID 2 68 -15 1 1134 1718 186 30 78 chr17 72066862 72067259 -23205392 - ORR1C1 LTR MaLR 0 378 1 1 1134 226 258 0 43 chr17 72068398 72068467 -23204184 - MLT1A1 LTR MaLR 0 408 343 1 1134 255 125 0 0 chr17 72068467 72068507 -23204144 + (A)n Simple_repeat Simple_repeat 1 40 0 1 1134 309 296 158 53 chr17 72068683 72068929 -23203722 + B4A SINE B4 7 278 -14 1 1134 225 65 0 0 chr17 72068949 72068980 -23203671 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1134 207 246 41 55 chr17 72069852 72069925 -23202726 + L2b LINE L2 3288 3359 -16 1 1134 593 264 139 33 chr17 72070847 72071062 -23201589 - B4 SINE B4 -53 239 2 1 1134 231 61 0 0 chr17 72071412 72071445 -23201206 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 1 1134 307 206 29 14 chr17 72071801 72071870 -23200781 + HAL1-2a_MD LINE L1 2454 2523 -501 1 1134 279 231 2 20 chr17 72071880 72071935 -23200716 - ID4_ SINE ID -85 67 13 1 1134 407 356 93 6 chr17 72072066 72072227 -23200424 - MIR SINE MIR -66 196 22 1 1134 311 276 127 24 chr17 72072828 72072954 -23199697 + MLT1A1 LTR MaLR 270 408 0 1 1134 367 269 51 54 chr17 72073896 72074060 -23198591 + B4 SINE B4 75 292 0 1 1134 210 207 0 0 chr17 72074063 72074121 -23198530 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1134 423 0 0 0 chr17 72074658 72074705 -23197946 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 1134 394 229 348 6 chr17 72074705 72074863 -23197788 - B4 SINE B4 -1 291 80 1 1134 1287 103 4 4 chr17 72074876 72075112 -23197539 + (TCTA)n Simple_repeat Simple_repeat 1 236 0 1 1134 806 249 313 14 chr17 72075114 72075399 -23197252 - ORR1D2 LTR MaLR 0 370 1 1 1134 357 288 53 18 chr17 72075455 72075568 -23197083 - PB1D10 SINE Alu 0 117 1 1 1134 453 36 0 0 chr17 72076073 72076128 -23196523 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1134 234 318 0 16 chr17 72076199 72076263 -23196388 + ID4_ SINE ID 12 74 -9 1 1134 692 257 7 0 chr17 72076311 72076451 -23196200 + ID_B1 SINE B4 8 148 -76 1 1134 212 211 0 26 chr17 72076447 72076486 -23196165 - B4 SINE B4 -212 80 43 1 1134 303 317 85 35 chr17 72078061 72078232 -23194419 - MIRm SINE MIR -59 209 33 1 1134 335 260 26 0 chr17 72078343 72078420 -23194231 - ORSL DNA Tip100 -169 106 28 1 1134 1188 56 0 0 chr17 72079033 72079176 -23193475 - B1_Mus1 SINE Alu -5 143 1 1 1134 351 0 0 0 chr17 72080447 72080486 -23192165 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1134 1359 90 11 0 chr17 72080717 72080894 -23191757 + B2_Mm1t SINE B2 1 179 -14 1 1134 279 140 398 21 chr17 72080934 72081032 -23191619 + B2_Mm2 SINE B2 46 180 -15 1 1134 1038 123 0 0 chr17 72081033 72081195 -23191456 + (GAA)n Simple_repeat Simple_repeat 2 163 0 1 1134 540 30 0 0 chr17 72081300 72081366 -23191285 + (CA)n Simple_repeat Simple_repeat 2 67 0 1 1134 614 37 12 0 chr17 72081372 72081453 -23191198 + (GA)n Simple_repeat Simple_repeat 1 82 0 1 1134 2367 140 45 10 chr17 72081561 72081964 -23190687 + MTC LTR MaLR 5 421 0 1 1134 1161 211 209 35 chr17 72082008 72082197 -23190454 - MTEa LTR MaLR -9 370 138 1 1134 1295 149 323 11 chr17 72082197 72082351 -23190300 + ORR1D1 LTR MaLR 1 237 -137 1 1134 333 0 0 0 chr17 72082351 72082388 -23190263 + (TC)n Simple_repeat Simple_repeat 2 38 0 1 1134 384 40 0 0 chr17 72082388 72082437 -23190214 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1134 1295 149 323 11 chr17 72082437 72082566 -23190085 + ORR1D1 LTR MaLR 238 373 -1 1 1134 1161 211 209 35 chr17 72082566 72082691 -23189960 - MTEa LTR MaLR -242 137 1 1 1134 635 247 58 78 chr17 72082797 72083039 -23189612 + RLTR20C LTR ERVK 55 291 -243 1 1134 205 188 21 0 chr17 72083230 72083278 -23189373 - MER5A DNA MER1_type -62 127 79 1 1134 318 283 75 99 chr17 72083284 72083445 -23189206 - HAL1-3A_ME LINE L1 -417 2441 2285 1 1134 1437 143 42 75 chr17 72083676 72084009 -23188642 + RLTRETN_Mm LTR ERVK 1 322 0 1 1134 301 257 14 14 chr17 72084022 72084093 -23188558 + MIRb SINE MIR 152 222 -46 1 1134 915 265 5 40 chr17 72084923 72085147 -23187504 - B4 SINE B4 -75 217 2 1 1134 1014 157 70 15 chr17 72086266 72086467 -23186184 + URR1B DNA MER1_type 5 216 -9 1 1134 6370 111 44 9 chr17 72086874 72087799 -23184852 + RMER17B LTR ERVK 1 958 0 1 1134 198 224 0 0 chr17 72087896 72087945 -23184706 + CT-rich Low_complexity Low_complexity 3 51 0 1 1134 262 226 33 124 chr17 72087949 72087996 -23184655 - PB1D10 SINE Alu -6 111 69 1 1134 186 43 0 0 chr17 72087996 72088019 -23184632 + (TATATG)n Simple_repeat Simple_repeat 4 26 0 1 1134 262 226 33 124 chr17 72088019 72088092 -23184559 - PB1D10 SINE Alu -49 68 2 1 1134 384 22 0 0 chr17 72088212 72088257 -23184394 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1135 959 277 136 58 chr17 72090737 72091186 -23181465 + RLTR18B LTR ERVK 1 484 -28 1 1135 1132 132 131 5 chr17 72091293 72091491 -23181160 - URR1A DNA MER1_type -3 223 1 1 1135 320 358 65 36 chr17 72092041 72092209 -23180442 + HAL1-3A_ME LINE L1 2267 2439 -419 1 1135 451 82 14 14 chr17 72092209 72092283 -23180368 + (GGA)n Simple_repeat Simple_repeat 3 76 0 1 1135 1243 240 76 17 chr17 72092945 72093246 -23179405 - MTE2b LTR MaLR 0 379 61 1 1135 228 268 169 82 chr17 72093086 72093293 -23179358 - MLT2B5 LTR ERVL -354 363 139 1 1135 198 0 0 0 chr17 72094051 72094073 -23178578 + (CTG)n Simple_repeat Simple_repeat 3 24 0 1 1135 216 0 0 0 chr17 72094382 72094406 -23178245 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1135 440 258 31 8 chr17 72094757 72094886 -23177765 + MIR SINE MIR 34 165 -97 1 1135 252 0 0 0 chr17 72095830 72095858 -23176793 + (TGGGGG)n Simple_repeat Simple_repeat 1 28 0 1 1135 957 53 0 0 chr17 72096441 72096573 -23176078 + (CA)n Simple_repeat Simple_repeat 1 132 0 1 1135 258 32 0 0 chr17 72096953 72096984 -23175667 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 1 1135 228 282 138 51 chr17 72097483 72097621 -23175030 + Charlie1 DNA MER1_type 1 150 -2631 1 1135 304 269 10 41 chr17 72097649 72097740 -23174911 + Charlie1 DNA MER1_type 2454 2541 -240 1 1135 987 73 0 0 chr17 72097740 72097877 -23174774 + (TC)n Simple_repeat Simple_repeat 1 137 0 1 1135 460 173 0 0 chr17 72097901 72097976 -23174675 + PB1D10 SINE Alu 3 77 -40 1 1135 429 186 82 41 chr17 72097997 72098143 -23174508 + Charlie1 DNA MER1_type 2615 2766 -15 1 1135 663 203 113 0 chr17 72102619 72102752 -23169899 + B1F SINE Alu 2 149 0 1 1135 837 149 14 7 chr17 72103033 72103175 -23169476 - B1_Mur1 SINE Alu -6 143 1 1 1135 493 248 40 0 chr17 72103240 72103365 -23169286 - RMER30 DNA MER1_type -60 142 13 1 1135 405 58 0 0 chr17 72103413 72103465 -23169186 + (CACCAT)n Simple_repeat Simple_repeat 5 56 0 1 1135 218 292 139 0 chr17 72103468 72103540 -23169111 - B1F SINE Alu 0 117 36 1 1135 585 212 0 0 chr17 72103552 72103651 -23169000 - PB1D10 SINE Alu -17 100 2 1 1135 198 316 0 0 chr17 72103657 72103714 -23168937 + MIRb SINE MIR 137 193 -75 1 1135 385 320 94 12 chr17 72104830 72105086 -23167565 + L1ME3 LINE L1 5599 5875 -289 2 1135 293 324 28 0 chr17 72105094 72105165 -23167486 + PB1 SINE Alu 3 75 -52 2 1135 814 197 14 0 chr17 72105192 72105339 -23167312 + B1F2 SINE Alu 1 149 0 2 1135 390 268 48 27 chr17 72105380 72105526 -23167125 + B1F SINE Alu 1 149 0 2 1135 479 279 147 43 chr17 72105539 72105771 -23166880 + L1ME3 LINE L1 5876 6131 -31 2 1135 379 355 36 0 chr17 72105932 72106042 -23166609 - MLT1F LTR MaLR -279 269 156 2 1135 2715 128 55 2 chr17 72106283 72106683 -23165968 + MTC LTR MaLR 1 421 0 2 1135 207 0 0 0 chr17 72106872 72106895 -23165756 + (GA)n Simple_repeat Simple_repeat 1 23 0 2 1135 237 280 0 0 chr17 72106895 72106945 -23165706 + B3A SINE B2 60 109 -89 2 1135 1178 278 47 43 chr17 72107444 72107932 -23164719 + L1MB5 LINE L1 5663 6152 -22 2 1135 1252 97 51 0 chr17 72108307 72108482 -23164169 - B2_Mm1t SINE B2 -8 185 2 2 1135 231 255 152 40 chr17 72108492 72108643 -23164008 - L1M5 LINE L1 -301 5823 5656 2 1135 1559 257 94 21 chr17 72108725 72109330 -23163321 - L1MC3 LINE L1 -21 7764 7116 2 1135 716 211 14 27 chr17 72109614 72109760 -23162891 + RSINE1 SINE B4 5 148 -17 2 1135 369 0 0 0 chr17 72109761 72109802 -23162849 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1135 827 283 84 33 chr17 72110007 72110281 -23162370 - B4A SINE B4 0 292 5 2 1135 1391 45 68 0 chr17 72110497 72110674 -23161977 - B2_Mm1a SINE B2 -2 191 3 2 1135 6188 151 107 19 chr17 72110757 72112665 -23159986 + Lx7 LINE L1 4791 6864 -832 2 1135 4612 127 5 28 chr17 72112669 72113163 -23159488 + RLTR22_Mur LTR ERVK 1 491 -1357 2 1135 3115 57 36 0 chr17 72113163 72113549 -23159102 - MTB LTR MaLR 0 400 1 2 1135 4612 127 5 28 chr17 72113549 72113878 -23158773 + RLTR22_Mur LTR ERVK 492 805 -1043 2 1135 493 181 114 0 chr17 72114154 72114259 -23158392 + RLTR22_Mur LTR ERVK 1589 1705 -143 2 1135 306 0 0 0 chr17 72114270 72114304 -23158347 + (TTA)n Simple_repeat Simple_repeat 3 36 0 2 1135 402 311 79 130 chr17 72114337 72114629 -23158022 - MLT1B LTR MaLR -30 360 84 2 1135 1004 174 54 49 chr17 72115096 72115320 -23157331 + URR1A DNA MER1_type 2 226 0 2 1135 431 218 0 18 chr17 72115589 72115701 -23156950 + G-rich Low_complexity Low_complexity 4 113 0 2 1135 190 179 18 18 chr17 72115721 72115778 -23156873 + GA-rich Low_complexity Low_complexity 5 61 0 2 1135 260 214 0 4 chr17 72116045 72116104 -23156547 - PB1D7 SINE Alu -54 93 37 2 1135 875 259 22 48 chr17 72116172 72116440 -23156211 + MamGypLTR2b LTR Gypsy 662 922 0 2 1135 247 262 170 41 chr17 72116860 72117007 -23155644 + LTR33 LTR ERVL 145 310 -205 2 1135 207 0 0 0 chr17 72117284 72117307 -23155344 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1135 3366 53 0 0 chr17 72117383 72117779 -23154872 - MTA_Mm LTR MaLR 0 396 1 2 1135 1109 277 148 74 chr17 72119509 72120329 -23152322 - L1MC2 LINE L1 -150 6194 5315 2 1135 252 0 0 0 chr17 72120368 72120396 -23152255 + (T)n Simple_repeat Simple_repeat 1 28 0 2 1135 252 59 0 0 chr17 72120449 72120483 -23152168 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 1135 479 237 131 28 chr17 72120499 72120858 -23151793 - L1MC2 LINE L1 -1031 5115 4664 2 1135 453 293 54 29 chr17 72121995 72122199 -23150452 + MLT1A0 LTR MaLR 156 364 -1 2 1135 730 224 47 37 chr17 72122287 72122444 -23150207 + B3A SINE B2 1 160 -38 2 1135 504 72 0 0 chr17 72122444 72122513 -23150138 + (CATA)n Simple_repeat Simple_repeat 2 70 0 2 1135 730 224 47 37 chr17 72122513 72122545 -23150106 + B3A SINE B2 161 192 -6 2 1135 230 298 75 28 chr17 72122556 72122663 -23149988 + MIRb SINE MIR 25 136 -132 2 1135 1286 158 14 0 chr17 72123952 72124173 -23148478 + URR1A DNA MER1_type 3 226 0 2 1135 197 65 32 0 chr17 72124335 72124366 -23148285 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 1135 271 312 99 63 chr17 72124417 72124719 -23147932 - L1MC5 LINE L1 -62 7899 7588 2 1135 465 206 83 56 chr17 72124719 72124863 -23147788 - B1F SINE Alu -1 148 1 2 1135 271 312 99 63 chr17 72124863 72125114 -23147537 - L1MC5 LINE L1 -374 7587 7326 2 1135 203 305 0 0 chr17 72125263 72125322 -23147329 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1135 1136 232 26 63 chr17 72125323 72125626 -23147025 - B4A SINE B4 0 292 1 2 1135 387 73 0 0 chr17 72126878 72126933 -23145718 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1135 180 0 0 0 chr17 72127113 72127133 -23145518 + (GA)n Simple_repeat Simple_repeat 1 20 0 2 1135 1819 181 6 14 chr17 72127287 72127646 -23145005 - MTC LTR MaLR 0 421 66 2 1135 1355 219 65 39 chr17 72127655 72128011 -23144640 + MTE2a LTR MaLR 15 379 0 2 1135 663 257 30 23 chr17 72128146 72128359 -23144292 - B3A SINE B2 0 216 6 2 1135 216 0 0 0 chr17 72129018 72129042 -23143609 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1135 315 0 0 0 chr17 72130375 72130410 -23142241 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1135 214 271 220 23 chr17 72130891 72131023 -23141628 + L3 LINE CR1 4265 4422 -67 2 1135 906 230 107 34 chr17 72133539 72133895 -23138756 - RCHARR1 DNA MER1_type -71 903 522 2 1135 671 167 272 0 chr17 72133903 72134065 -23138586 - B3 SINE B2 -1 215 10 2 1135 21 71 0 0 chr17 72134078 72134120 -23138531 + AT_rich Low_complexity Low_complexity 1 42 0 2 1135 664 195 17 0 chr17 72134120 72134238 -23138413 - B1_Mur4 SINE Alu -14 136 17 2 1135 1426 248 81 44 chr17 72134206 72134747 -23137904 - RCHARR1 DNA MER1_type -413 561 1 2 1135 416 179 12 60 chr17 72135470 72135553 -23137098 + ID4 SINE ID 3 81 -2 2 1135 288 247 0 49 chr17 72135791 72135872 -23136779 - B4A SINE B4 0 292 216 2 1135 302 292 58 58 chr17 72136126 72136202 -23136449 - B4 SINE B4 -154 138 63 2 1135 297 0 0 0 chr17 72136202 72136235 -23136416 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1135 302 292 58 58 chr17 72136235 72136296 -23136355 - B4 SINE B4 -230 62 1 2 1135 805 162 9 4 chr17 72136625 72137083 -23135568 + (CCAA)n Simple_repeat Simple_repeat 1 460 0 2 1135 1575 162 176 3 chr17 72137967 72138324 -23134327 - MTC LTR MaLR 0 419 1 2 1135 999 229 93 80 chr17 72140502 72140867 -23131784 - ORR1D2 LTR MaLR 0 370 1 2 1135 559 167 171 23 chr17 72141123 72141252 -23131399 + B1_Mur2 SINE Alu 2 149 0 2 1135 1129 73 0 0 chr17 72141387 72141524 -23131127 + B1_Mm SINE Alu 1 137 -10 2 1135 912 183 93 10 chr17 72141554 72141747 -23130904 - B3 SINE B2 -6 210 2 2 1135 252 265 36 0 chr17 72141905 72141988 -23130663 + MER5A1 DNA MER1_type 51 136 -30 2 1135 243 61 0 0 chr17 72142381 72142414 -23130237 + (CAA)n Simple_repeat Simple_repeat 2 34 0 2 1135 365 266 304 4 chr17 72142799 72143026 -23129625 - Lx9 LINE L1 -9 7635 7341 2 1135 1352 77 55 0 chr17 72143120 72143301 -23129350 + B2_Mm2 SINE B2 1 191 -4 2 1135 1053 192 23 9 chr17 72144250 72144466 -23128185 - URR1B DNA MER1_type -6 219 1 2 1135 366 289 14 9 chr17 72144871 72145012 -23127639 - MER34B-int LTR ERV1 -833 4523 4419 2 1135 309 283 73 60 chr17 72145544 72145777 -23126874 - MER34B-int LTR ERV1 -1713 3643 3408 2 1135 1165 41 0 33 chr17 72145913 72146065 -23126586 - B1_Mus2 SINE Alu 0 147 1 2 1135 221 154 0 37 chr17 72146206 72146260 -23126391 + (TATATG)n Simple_repeat Simple_repeat 4 55 0 2 1135 307 251 101 108 chr17 72146296 72146564 -23126087 - MER34B-int LTR ERV1 -2152 3204 2939 2 1135 1634 157 84 17 chr17 72147484 72147828 -23124823 - ORR1C1 LTR MaLR -11 367 1 2 1135 4493 214 85 58 chr17 72148748 72150031 -23122620 - Lx9 LINE L1 0 7644 6328 2 1135 528 193 0 0 chr17 72153533 72153647 -23119004 + (TG)n Simple_repeat Simple_repeat 1 114 0 2 1135 594 298 80 77 chr17 72153653 72153721 -23118930 - B4A SINE B4 -4 288 230 2 1135 744 90 229 0 chr17 72153721 72153843 -23118808 - B1_Mur4 SINE Alu 0 150 1 2 1135 594 298 80 77 chr17 72153843 72154061 -23118590 - B4A SINE B4 -63 229 1 2 1135 28 0 0 0 chr17 72154067 72154095 -23118556 + AT_rich Low_complexity Low_complexity 1 28 0 2 1135 728 231 62 13 chr17 72154676 72154900 -23117751 - LTRIS4 LTR ERV1 0 507 273 2 1135 472 204 9 9 chr17 72157010 72157124 -23115527 - Lx9 LINE L1 -624 7020 6907 2 1135 466 172 282 6 chr17 72157119 72157289 -23115362 + Lx9 LINE L1 7421 7637 -7 2 1135 220 352 76 11 chr17 72157355 72157447 -23115204 - ID_B1 SINE B4 -49 175 78 2 1135 549 0 0 0 chr17 72157469 72157530 -23115121 + (GA)n Simple_repeat Simple_repeat 2 62 0 2 1135 322 273 180 19 chr17 72157550 72157748 -23114903 - B4 SINE B4 -8 284 43 2 1135 289 287 165 51 chr17 72158035 72158369 -23114282 - L1M3 LINE L1 -1470 4676 4305 2 1135 477 272 172 28 chr17 72158713 72159038 -23113613 - L1M3 LINE L1 -2376 3770 3399 2 1135 534 275 213 56 chr17 72159120 72159624 -23113027 - L1MD LINE L1 -2859 3287 2713 2 1135 608 244 87 10 chr17 72159624 72159819 -23112832 - B3 SINE B2 -4 212 3 2 1135 534 275 213 56 chr17 72159819 72159995 -23112656 - L1MD LINE L1 -3434 2712 2500 2 1135 198 71 0 0 chr17 72161202 72161230 -23111421 + (CGTG)n Simple_repeat Simple_repeat 4 31 0 2 1135 483 61 0 0 chr17 72161996 72162062 -23110589 - L1Md_F2 LINE L1 -12 6570 6505 2 1135 7965 148 129 22 chr17 72162079 72163125 -23109526 - Lx3C LINE L1 -2 6974 5791 2 1135 1204 108 6 11 chr17 72163125 72163144 -23109507 - B2_Mm2 SINE B2 -18 177 159 2 1135 387 0 0 0 chr17 72163144 72163187 -23109464 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 2 1135 1204 108 6 11 chr17 72163187 72163345 -23109306 - B2_Mm2 SINE B2 -37 158 1 2 1135 7965 129 12 23 chr17 72163345 72164547 -23108104 - Lx3C LINE L1 -93 5793 4604 2 1135 372 20 0 0 chr17 72165321 72165371 -23107280 - L1Md_T LINE L1 0 6582 6533 2 1135 278 307 115 23 chr17 72165566 72165696 -23106955 - MER58A DNA MER1_type -12 212 71 2 1135 180 0 0 0 chr17 72165892 72165912 -23106739 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1135 270 0 0 0 chr17 72166084 72166114 -23106537 + (TAA)n Simple_repeat Simple_repeat 1 30 0 2 1135 1449 83 10 0 chr17 72166275 72166467 -23106184 + B2_Mm2 SINE B2 1 194 -1 2 1135 728 168 53 0 chr17 72166477 72166608 -23106043 + B1_Mur4 SINE Alu 6 143 -7 2 1135 235 284 83 124 chr17 72166478 72166623 -23106028 + B4 SINE B4 94 232 -60 2 1135 299 127 16 0 chr17 72166623 72166686 -23105965 + (GAAA)n Simple_repeat Simple_repeat 2 65 0 2 1135 280 281 132 0 chr17 72166710 72166824 -23105827 + B4A SINE B4 17 145 -147 2 1135 34 24 0 0 chr17 72166969 72167010 -23105641 + AT_rich Low_complexity Low_complexity 1 41 0 3 1135 7585 74 11 6 chr17 72167014 72168585 -23104066 - L1_Mus2 LINE L1 0 6566 4983 3 1135 183 100 0 0 chr17 72168602 72168632 -23104019 + (CAA)n Simple_repeat Simple_repeat 1 30 0 3 1135 288 0 0 0 chr17 72168856 72168888 -23103763 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1135 1994 83 7 7 chr17 72168971 72169263 -23103388 - ORR1A2 LTR MaLR -8 319 28 3 1135 253 191 32 0 chr17 72169263 72169326 -23103325 - ORR1A2 LTR MaLR -262 65 1 3 1135 348 231 55 0 chr17 72169326 72169415 -23103236 - RSINE1 SINE B4 -68 97 4 3 1135 233 255 184 18 chr17 72169508 72169676 -23102975 + MER44A DNA MER2_type 39 234 -105 3 1135 473 0 18 0 chr17 72169881 72169938 -23102713 + (TCTCC)n Simple_repeat Simple_repeat 5 62 0 3 1135 1088 128 0 6 chr17 72169947 72170127 -23102524 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 3 1135 1724 167 46 14 chr17 72170344 72170690 -23101961 - Lx5 LINE L1 -6 7044 6688 3 1135 737 256 107 71 chr17 72170753 72171142 -23101509 - RMER2 LTR ERV1 -69 498 1 3 1135 868 195 13 0 chr17 72171142 72171301 -23101350 - Lx5 LINE L1 -359 6691 6531 3 1135 7276 148 29 3 chr17 72171301 72172594 -23100057 - L1_Mur2 LINE L1 -2121 3756 2430 3 1135 912 177 167 30 chr17 72172711 72172909 -23099742 + URR1B DNA MER1_type 1 225 0 3 1135 414 0 0 0 chr17 72173008 72173054 -23099597 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1135 183 268 0 0 chr17 72173868 72173909 -23098742 + L2c LINE L2 3280 3320 -67 3 1135 448 301 44 33 chr17 72175388 72175570 -23097081 + L1MD2 LINE L1 6133 6316 -43 3 1135 234 133 22 0 chr17 72175598 72175643 -23097008 + L1MDa LINE L1 1307 1352 -5281 3 1135 794 143 0 35 chr17 72176845 72176990 -23095661 + B1_Mur2 SINE Alu 9 148 -1 3 1135 273 183 0 0 chr17 72177739 72177799 -23094852 + T-rich Low_complexity Low_complexity 1 60 0 3 1135 194 128 26 0 chr17 72178081 72178120 -23094531 + C-rich Low_complexity Low_complexity 1 40 0 3 1135 189 179 26 0 chr17 72178187 72178226 -23094425 + L2c LINE L2 2961 3000 -387 3 1135 989 172 22 6 chr17 72181169 72181350 -23091301 + B3A SINE B2 1 184 -14 3 1135 598 327 38 27 chr17 72181560 72181821 -23090830 - LTR40b LTR ERVL 0 462 199 3 1135 393 75 0 0 chr17 72182119 72182172 -23090479 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1135 222 118 0 0 chr17 72182511 72182545 -23090106 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 3 1135 252 0 0 0 chr17 72184417 72184445 -23088206 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 3 1135 191 324 101 37 chr17 72185525 72185634 -23087017 - MIRm SINE MIR 0 276 161 3 1135 192 77 0 0 chr17 72186624 72186650 -23086001 + (CCA)n Simple_repeat Simple_repeat 1 26 0 3 1135 246 32 0 0 chr17 72188063 72188094 -23084557 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1135 497 229 0 22 chr17 72188415 72188598 -23084053 + (TG)n Simple_repeat Simple_repeat 2 180 0 3 1135 337 252 37 52 chr17 72188608 72188742 -23083909 - L1MC LINE L1 -1423 4723 4592 3 1135 642 311 96 0 chr17 72188807 72189067 -23083584 + Tigger7 DNA MER2_type 18 302 -2189 3 1135 560 192 19 0 chr17 72189087 72189210 -23083441 + B1_Mur3 SINE Alu 11 143 -6 3 1135 24 32 0 0 chr17 72189319 72189350 -23083301 + AT_rich Low_complexity Low_complexity 1 31 0 3 1135 25532 95 12 9 chr17 72189410 72193810 -23078841 - L1_Mus1 LINE L1 0 6567 2154 3 1135 2076 215 122 69 chr17 72193810 72194664 -23077987 - RLTR13D6 LTR ERVK 0 1033 1 3 1135 6444 112 40 12 chr17 72194664 72196362 -23076289 - L1Md_F LINE L1 -3724 2159 412 3 1135 414 256 35 124 chr17 72196414 72196615 -23076036 - B3A SINE B2 -3 195 13 3 1135 184 122 61 0 chr17 72196628 72196677 -23075974 + T-rich Low_complexity Low_complexity 3 54 0 3 1135 232 278 38 129 chr17 72196678 72196810 -23075841 - PB1D9 SINE Alu 0 120 1 3 1135 416 19 19 0 chr17 72198005 72198058 -23074593 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 1135 1754 211 143 25 chr17 72198573 72199084 -23073567 - RMER15 LTR ERVL -3 572 2 3 1135 249 248 162 0 chr17 72200141 72200246 -23072405 - Lx8 LINE L1 -6 7467 7346 3 1135 2212 266 68 59 chr17 72200325 72200822 -23071829 - Lx8 LINE L1 -1668 5976 5451 3 1135 461 224 333 0 chr17 72200822 72200978 -23071673 + B3 SINE B2 1 208 -8 3 1135 2212 281 66 102 chr17 72200978 72201027 -23071624 - Lx8 LINE L1 -430 5450 5408 3 1135 979 217 39 5 chr17 72201027 72201235 -23071416 - B3 SINE B2 -1 215 1 3 1135 2212 281 66 102 chr17 72201235 72202572 -23070079 - Lx8 LINE L1 -473 5407 4147 3 1135 467 247 89 0 chr17 72202606 72202764 -23069887 + L1_Rod LINE L1 3943 4114 -1733 3 1135 337 236 37 9 chr17 72203346 72203453 -23069198 - PB1D10 SINE Alu -7 110 1 3 1135 254 295 84 70 chr17 72203458 72203600 -23069051 - ID_B1 SINE B4 -2 222 79 3 1135 360 275 46 75 chr17 72203772 72203945 -23068706 + B4A SINE B4 1 168 -124 3 1135 338 222 0 11 chr17 72204217 72204308 -23068343 + G-rich Low_complexity Low_complexity 2 91 0 3 1135 180 152 0 0 chr17 72205005 72205038 -23067613 + CT-rich Low_complexity Low_complexity 1 33 0 3 1135 270 0 0 0 chr17 72205038 72205068 -23067583 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1135 186 43 0 0 chr17 72206145 72206168 -23066483 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1135 234 0 0 0 chr17 72207925 72207951 -23064700 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 3 1135 936 235 112 31 chr17 72207951 72208210 -23064441 - Lx8 LINE L1 -144 7329 7050 3 1135 922 192 272 40 chr17 72208802 72209100 -23063551 - ORR1D2 LTR MaLR 0 370 4 3 1135 681 167 60 15 chr17 72209265 72209399 -23063252 + RLTR16 LTR ERVK 1 140 -365 3 1135 4917 57 17 2 chr17 72209399 72210100 -23062551 - L1_Mus2 LINE L1 -644 5922 5206 3 1135 4943 56 8 14 chr17 72210100 72210734 -23061917 + L1_Mus2 LINE L1 5936 6565 -1 3 1135 1615 169 66 17 chr17 72210744 72211016 -23061635 + RLTR16 LTR ERVK 126 400 -105 3 1135 300 111 0 0 chr17 72211016 72211070 -23061581 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1135 1615 169 66 17 chr17 72211070 72211159 -23061492 + RLTR16 LTR ERVK 401 505 0 3 1135 1960 228 26 3 chr17 72211583 72211974 -23060677 - Lx5 LINE L1 0 7050 6651 3 1135 740 202 23 29 chr17 72211982 72212155 -23060496 + Lx5 LINE L1 6481 6652 -398 3 1135 221 200 0 0 chr17 72214534 72214584 -23058067 - B1F1 SINE Alu -91 58 9 3 1135 482 43 14 0 chr17 72217256 72217325 -23055326 + (CA)n Simple_repeat Simple_repeat 2 71 0 3 1135 26 0 0 0 chr17 72218004 72218030 -23054621 + AT_rich Low_complexity Low_complexity 1 26 0 3 1135 23 0 0 0 chr17 72218982 72219005 -23053646 + GC_rich Low_complexity Low_complexity 1 23 0 3 1135 22 80 0 0 chr17 72219224 72219274 -23053377 + GC_rich Low_complexity Low_complexity 1 50 0 3 1135 627 0 24 12 chr17 72219528 72219612 -23053039 + (GA)n Simple_repeat Simple_repeat 2 86 0 3 1135 572 220 153 36 chr17 72219657 72219957 -23052694 + MTD LTR MaLR 20 364 -55 3 1135 425 207 134 60 chr17 72220267 72220416 -23052235 - RSINE1 SINE B4 -3 162 3 3 1135 358 36 0 35 chr17 72220424 72220482 -23052169 + (TTTTTG)n Simple_repeat Simple_repeat 2 57 0 3 1136 234 299 88 15 chr17 72220793 72220929 -23051722 - Charlie22a DNA MER1_type -298 193 48 3 1136 2388 122 67 20 chr17 72221453 72221854 -23050797 + MTC LTR MaLR 1 420 -1 3 1136 877 194 96 15 chr17 72222410 72222609 -23050042 + B3 SINE B2 2 216 0 3 1136 670 263 18 18 chr17 72222850 72223078 -23049573 + Lx9 LINE L1 7242 7469 -175 3 1136 180 0 0 0 chr17 72223085 72223105 -23049546 + (TAA)n Simple_repeat Simple_repeat 2 21 0 3 1136 1032 75 67 0 chr17 72223812 72223946 -23048705 - B1_Mus1 SINE Alu -1 147 5 3 1136 273 29 0 0 chr17 72224666 72224700 -23047951 + (TCTG)n Simple_repeat Simple_repeat 4 37 0 3 1136 737 289 0 0 chr17 72224703 72224859 -23047792 - B3A SINE B2 -42 156 1 3 1136 648 278 36 46 chr17 72224899 72225118 -23047533 - B4 SINE B4 -75 217 1 3 1136 386 271 90 30 chr17 72225451 72225584 -23047067 - B1F2 SINE Alu 0 149 9 3 1136 408 212 0 48 chr17 72225912 72225996 -23046655 - ID4_ SINE ID -2 81 2 3 1136 334 341 21 42 chr17 72226006 72226150 -23046501 - ID_B1 SINE B4 0 224 84 3 1136 364 304 52 26 chr17 72226036 72226151 -23046500 - B1F2 SINE Alu -30 119 2 3 1136 517 209 78 0 chr17 72227075 72227190 -23045461 - B1F SINE Alu -13 136 13 3 1136 557 350 77 31 chr17 72228138 72228465 -23044186 - HAL1 LINE L1 -1090 1417 1076 3 1136 1017 266 119 20 chr17 72228471 72228874 -23043777 - L1MC3 LINE L1 -7 7778 7336 3 1136 1007 173 98 102 chr17 72229020 72229245 -23043406 + URR1A DNA MER1_type 1 224 -2 3 1136 442 335 48 12 chr17 72229833 72229999 -23042652 + MER5A DNA MER1_type 2 173 -16 3 1136 423 242 58 39 chr17 72231404 72231415 -23041236 - CYRA11_Mm Unknown Y-chromosome -295 322 239 3 1136 839 124 44 0 chr17 72231415 72231552 -23041099 + URR1B DNA MER1_type 83 225 0 3 1136 757 230 5 101 chr17 72231978 72232176 -23040475 + MTE2b LTR MaLR 1 179 -200 3 1136 761 133 0 7 chr17 72232176 72232312 -23040339 + (GGA)n Simple_repeat Simple_repeat 3 137 0 3 1136 1027 216 9 37 chr17 72232312 72232325 -23040326 + MTE2b LTR MaLR 168 177 -202 3 1136 1297 61 0 11 chr17 72232325 72232507 -23040144 + (GAA)n Simple_repeat Simple_repeat 1 180 0 3 1136 8099 28 0 0 chr17 72232507 72233432 -23039219 + L1Md_A LINE L1 5655 6579 -3 3 1136 699 12 0 0 chr17 72233432 72233512 -23039139 + (GAA)n Simple_repeat Simple_repeat 2 81 0 3 1136 1027 216 9 37 chr17 72233512 72233712 -23038939 + MTE2b LTR MaLR 178 375 -4 3 1136 1031 216 111 130 chr17 72234963 72235340 -23037311 + ORR1D2 LTR MaLR 1 370 0 3 1136 333 323 50 78 chr17 72235858 72236076 -23036575 + L3 LINE CR1 846 1057 -3432 3 1136 486 361 20 20 chr17 72236183 72236381 -23036270 + B4A SINE B4 91 288 -4 3 1136 203 265 0 0 chr17 72236390 72236439 -23036212 + (CATA)n Simple_repeat Simple_repeat 4 52 0 3 1136 387 0 0 0 chr17 72236439 72236482 -23036169 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1136 468 271 42 8 chr17 72236521 72236640 -23036011 + B1F SINE Alu 20 142 -7 3 1136 1998 52 4 4 chr17 72236662 72236913 -23035738 + L1_Mus2 LINE L1 6316 6566 0 4 1136 924 189 94 5 chr17 72236956 72237148 -23035503 + B3 SINE B2 1 209 -7 4 1136 526 254 9 9 chr17 72237906 72238021 -23034630 + B4A SINE B4 1 115 -177 4 1136 1786 214 123 69 chr17 72238024 72238561 -23034090 + RMER2 LTR ERV1 1 566 -1 4 1136 694 312 6 0 chr17 72238561 72238735 -23033916 + B4A SINE B4 115 289 -3 4 1136 468 77 0 0 chr17 72240801 72240866 -23031785 + (TG)n Simple_repeat Simple_repeat 1 65 0 4 1136 326 306 80 9 chr17 72240874 72240986 -23031665 - B4A SINE B4 -2 290 171 4 1136 392 337 101 68 chr17 72240993 72241200 -23031451 - B4A SINE B4 -75 217 4 4 1136 1119 204 43 14 chr17 72241221 72241430 -23031221 + B3 SINE B2 1 215 -1 4 1136 912 186 106 5 chr17 72241814 72242003 -23030648 + URR1B DNA MER1_type 18 225 0 4 1136 29 60 0 0 chr17 72242938 72242988 -23029663 + AT_rich Low_complexity Low_complexity 1 50 0 4 1136 296 276 0 8 chr17 72243785 72243913 -23028738 + (TG)n Simple_repeat Simple_repeat 1 127 0 4 1136 233 146 21 0 chr17 72244206 72244254 -23028397 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1136 1178 202 33 159 chr17 72245550 72245896 -23026755 - Lx7 LINE L1 0 7696 7367 4 1136 963 152 0 0 chr17 72245896 72246074 -23026577 + GA-rich Low_complexity Low_complexity 3 180 0 4 1136 1178 202 33 159 chr17 72246074 72246153 -23026498 - Lx7 LINE L1 -330 7366 7345 4 1136 216 0 0 0 chr17 72246153 72246177 -23026474 + (CAG)n Simple_repeat Simple_repeat 2 25 0 4 1136 1178 202 33 159 chr17 72246177 72246322 -23026329 - Lx7 LINE L1 -352 7344 7197 4 1136 22 0 0 0 chr17 72246327 72246349 -23026302 + AT_rich Low_complexity Low_complexity 1 22 0 4 1136 198 289 7 0 chr17 72246702 72246765 -23025886 - L2a LINE L2 -1 3425 3322 4 1136 711 221 0 27 chr17 72247561 72247710 -23024941 - MTE2a LTR MaLR -9 370 226 4 1136 277 196 20 0 chr17 72247705 72247756 -23024895 - MTE2a LTR MaLR -327 52 1 4 1136 292 331 77 28 chr17 72247806 72247949 -23024702 - LTR16B2 LTR ERVL -150 312 163 4 1136 328 324 27 40 chr17 72248830 72248978 -23023673 + L3 LINE CR1 3713 3858 -631 4 1136 329 353 65 7 chr17 72249090 72249244 -23023407 - HAL1-3A_ME LINE L1 -412 2446 2284 4 1136 301 367 60 13 chr17 72249243 72249392 -23023259 - HAL1-3A_ME LINE L1 -419 2439 2284 4 1136 301 268 12 24 chr17 72249392 72249476 -23023175 + CT-rich Low_complexity Low_complexity 4 86 0 4 1136 1176 54 7 0 chr17 72254687 72254834 -23017817 + B1_Mus1 SINE Alu 1 148 0 4 1136 234 62 0 0 chr17 72254837 72254869 -23017782 + (A)n Simple_repeat Simple_repeat 1 32 0 4 1136 483 18 0 0 chr17 72255050 72255106 -23017545 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 1136 220 80 39 39 chr17 72255318 72255370 -23017281 + (TCTG)n Simple_repeat Simple_repeat 1 52 0 4 1136 191 306 168 44 chr17 72256815 72257041 -23015610 + L2b LINE L2 2233 2486 -933 4 1136 198 0 0 0 chr17 72257042 72257064 -23015587 + (TC)n Simple_repeat Simple_repeat 2 23 0 4 1136 462 36 0 0 chr17 72257064 72257119 -23015532 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 1136 277 218 50 43 chr17 72257139 72257249 -23015402 - B1F SINE Alu -8 141 5 4 1136 606 291 34 10 chr17 72257291 72257496 -23015155 + L2b LINE L2 2555 2764 -655 4 1136 275 242 77 60 chr17 72257708 72257839 -23014812 + L2b LINE L2 3285 3425 -1 4 1136 372 323 20 55 chr17 72257916 72258116 -23014535 + MER20 DNA MER1_type 20 212 -7 4 1136 900 93 0 0 chr17 72258150 72258300 -23014351 + (TC)n Simple_repeat Simple_repeat 2 151 0 4 1136 369 0 0 0 chr17 72258485 72258526 -23014125 + (TGG)n Simple_repeat Simple_repeat 2 42 0 4 1136 333 306 40 16 chr17 72259756 72259882 -23012769 + ORR1E LTR MaLR 8 136 -223 4 1136 268 312 13 0 chr17 72259884 72259961 -23012690 + ORR1E LTR MaLR 289 366 -13 4 1136 546 267 144 35 chr17 72260076 72260278 -23012373 - ID_B1 SINE B4 0 224 1 4 1136 201 156 0 0 chr17 72261406 72261438 -23011213 + L2b LINE L2 3326 3357 -18 4 1136 293 307 45 0 chr17 72262635 72262723 -23009928 - MIRc SINE MIR -107 161 70 4 1136 1515 35 2 0 chr17 72262935 72263459 -23009192 + (TG)n Simple_repeat Simple_repeat 1 524 0 4 1136 237 259 172 23 chr17 72263468 72263555 -23009096 + B4 SINE B4 125 224 -68 4 1136 277 311 6 22 chr17 72263607 72263732 -23008919 + MIRc SINE MIR 84 211 -57 4 1136 285 298 99 53 chr17 72264620 72264751 -23007900 + MIRb SINE MIR 66 202 -66 4 1136 189 182 0 0 chr17 72266176 72266209 -23006442 + L2a LINE L2 3375 3407 -19 4 1136 1346 129 4 100 chr17 72266281 72266531 -23006120 - URR1A DNA MER1_type 0 226 1 4 1136 247 368 9 17 chr17 72267617 72267733 -23004918 + PB1D10 SINE Alu 1 115 -2 4 1136 282 221 14 42 chr17 72267744 72267815 -23004836 + BC1_Mm scRNA scRNA 31 99 -53 4 1136 1088 139 3 0 chr17 72268143 72268474 -23004177 + (TG)n Simple_repeat Simple_repeat 1 331 0 4 1136 217 241 51 17 chr17 72268603 72268626 -23004025 - ID_B1 SINE B4 -128 96 36 4 1136 245 167 0 0 chr17 72268626 72268662 -23003989 - ID4_ SINE ID -13 70 35 4 1136 390 301 42 7 chr17 72269035 72269179 -23003472 + Charlie19a DNA Charlie 175 323 -63 4 1136 200 261 71 14 chr17 72270247 72270317 -23002334 + MER5A DNA MER1_type 17 90 -99 4 1136 366 335 32 83 chr17 72270558 72270720 -23001931 + B4A SINE B4 24 176 -116 4 1136 209 108 0 26 chr17 72270720 72270758 -23001893 + (CAGC)n Simple_repeat Simple_repeat 3 39 0 4 1136 366 335 32 83 chr17 72270758 72270813 -23001838 + B4A SINE B4 177 230 -62 4 1136 188 277 185 34 chr17 72270902 72271048 -23001603 + L2c LINE L2 3150 3317 -70 4 1136 194 301 87 24 chr17 72271140 72271266 -23001385 - MIRb SINE MIR -125 143 10 4 1136 255 125 0 0 chr17 72272047 72272087 -23000564 + (GGA)n Simple_repeat Simple_repeat 1 40 0 4 1136 1084 265 55 15 chr17 72272124 72272396 -23000255 - B4 SINE B4 0 292 10 4 1136 237 320 109 10 chr17 72273139 72273240 -22999411 - PB1D10 SINE Alu -2 115 5 4 1136 442 323 47 0 chr17 72273775 72273902 -22998749 + RCHARR1 DNA MER1_type 74 206 -768 4 1136 201 39 0 0 chr17 72273902 72273928 -22998723 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1136 751 238 51 69 chr17 72273932 72274354 -22998297 + RCHARR1 DNA MER1_type 252 965 -9 4 1136 326 336 29 15 chr17 72274354 72274490 -22998161 + MIRb SINE MIR 96 233 -35 4 1136 871 133 30 0 chr17 72276298 72276433 -22996218 + B1_Mur4 SINE Alu 3 141 -9 4 1136 368 67 0 16 chr17 72276441 72276502 -22996149 + (CAA)n Simple_repeat Simple_repeat 1 60 0 4 1136 189 0 0 0 chr17 72276506 72276527 -22996124 + (CAAA)n Simple_repeat Simple_repeat 3 23 0 4 1136 534 262 40 29 chr17 72276652 72276825 -22995826 + B4A SINE B4 1 175 -117 4 1136 626 275 18 78 chr17 72276870 72277087 -22995564 + B4 SINE B4 89 292 0 4 1136 26 0 0 0 chr17 72277612 72277638 -22995013 + AT_rich Low_complexity Low_complexity 1 26 0 4 1136 311 319 155 13 chr17 72278654 72278886 -22993765 - L1ME3B LINE L1 -7 6233 5969 4 1136 250 299 52 0 chr17 72278928 72279005 -22993646 - ID4_ SINE ID -2 81 1 4 1136 207 0 0 0 chr17 72279016 72279039 -22993612 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1136 441 0 0 0 chr17 72279126 72279175 -22993476 + (TATATG)n Simple_repeat Simple_repeat 3 51 0 4 1136 370 305 70 30 chr17 72279201 72279431 -22993220 - L1MC5 LINE L1 -356 7605 7367 4 1136 419 320 48 64 chr17 72279539 72279916 -22992735 - L1MC5 LINE L1 -769 7192 6822 4 1136 1111 321 95 18 chr17 72279952 72280131 -22992520 + L1_Mur3 LINE L1 5037 5273 -1018 4 1136 189 0 0 0 chr17 72280131 72280152 -22992499 + (CAA)n Simple_repeat Simple_repeat 2 22 0 4 1136 1163 294 82 1 chr17 72280152 72280634 -22992017 + L1_Mur3 LINE L1 5274 5785 -506 4 1136 2145 209 82 23 chr17 72280635 72281209 -22991442 + L1MA4 LINE L1 4879 5486 -361 4 1136 249 154 0 0 chr17 72281210 72281249 -22991402 - L1_Mur1 LINE L1 -335 5551 5513 4 1136 1431 288 107 33 chr17 72281268 72281940 -22990711 + Lx9 LINE L1 6857 7578 -66 4 1136 395 216 93 39 chr17 72281996 72282147 -22990504 + L1MA4 LINE L1 5744 5907 -393 4 1136 390 273 150 12 chr17 72282368 72282535 -22990116 - L1MC5 LINE L1 -1135 6826 6637 4 1136 664 241 88 44 chr17 72282859 72282882 -22989769 - B3A SINE B2 -7 191 167 4 1136 645 47 0 0 chr17 72282882 72282967 -22989684 + (CA)n Simple_repeat Simple_repeat 1 85 0 4 1136 664 241 88 44 chr17 72282967 72283125 -22989526 - B3A SINE B2 -32 166 2 4 1136 232 288 0 0 chr17 72284874 72284933 -22987718 - Tigger15a DNA TcMar -259 456 398 4 1136 316 59 19 19 chr17 72284961 72285013 -22987638 + (TCTCCC)n Simple_repeat Simple_repeat 3 54 0 4 1136 369 0 0 0 chr17 72285533 72285574 -22987077 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1136 207 88 0 0 chr17 72286114 72286148 -22986503 + (A)n Simple_repeat Simple_repeat 1 34 0 4 1136 498 164 0 0 chr17 72286472 72286594 -22986057 + GA-rich Low_complexity Low_complexity 1 122 0 4 1136 263 283 82 38 chr17 72286981 72287089 -22985562 + MLT1J LTR MaLR 239 411 -199 4 1136 30 0 0 0 chr17 72287180 72287210 -22985441 + AT_rich Low_complexity Low_complexity 1 30 0 4 1136 2547 165 33 23 chr17 72287800 72288320 -22984331 + RLTR11A2 LTR ERVK 1 525 -2 4 1136 507 45 0 0 chr17 72289681 72289747 -22982904 + (CA)n Simple_repeat Simple_repeat 1 66 0 4 1136 428 288 134 48 chr17 72290111 72290447 -22982204 + MLT1F2 LTR MaLR 32 396 -164 4 1136 230 293 53 0 chr17 72290466 72290541 -22982110 + MLT1F2 LTR MaLR 578 656 -24 4 1136 562 257 43 22 chr17 72291260 72291399 -22981252 - ID_B1 SINE B4 -2 222 81 4 1136 257 0 30 0 chr17 72291757 72291790 -22980861 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 4 1136 1166 117 22 11 chr17 72292079 72292260 -22980391 + B2_Mm2 SINE B2 13 195 0 4 1136 265 203 29 14 chr17 72292272 72292342 -22980309 + (TATG)n Simple_repeat Simple_repeat 3 73 0 4 1136 645 268 126 12 chr17 72292367 72292613 -22980038 - B4A SINE B4 -17 275 2 4 1136 1096 263 7 35 chr17 72292737 72293021 -22979630 + B4 SINE B4 2 277 -15 4 1136 315 0 0 0 chr17 72293064 72293099 -22979552 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 1136 223 280 0 0 chr17 72293257 72293307 -22979344 + B4A SINE B4 30 79 -213 4 1136 282 200 167 3 chr17 72294183 72294262 -22978389 + MIRc SINE MIR 69 157 -105 4 1136 438 307 0 0 chr17 72295507 72295683 -22976968 + (TG)n Simple_repeat Simple_repeat 1 176 0 4 1136 646 216 235 30 chr17 72295689 72295923 -22976728 - B4 SINE B4 -6 286 5 4 1136 447 19 0 0 chr17 72296172 72296224 -22976427 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 4 1136 228 135 0 0 chr17 72296247 72296284 -22976367 + (TATG)n Simple_repeat Simple_repeat 3 39 0 5 1136 492 304 19 12 chr17 72296284 72296444 -22976207 - RSINE1 SINE B4 0 165 5 5 1136 186 191 0 0 chr17 72296706 72296748 -22975903 + (CAGAGA)n Simple_repeat Simple_repeat 1 42 0 5 1136 322 245 61 10 chr17 72297556 72297655 -22974996 + CT-rich Low_complexity Low_complexity 2 105 0 5 1136 248 303 62 82 chr17 72300059 72300156 -22972495 - MamRep38 DNA hAT -154 141 47 5 1136 1325 282 19 21 chr17 72300548 72300979 -22971672 + L1MB7 LINE L1 5745 6174 -10 5 1136 224 271 0 0 chr17 72300979 72301027 -22971624 + GA-rich Low_complexity Low_complexity 1 48 0 5 1136 279 0 0 0 chr17 72301080 72301111 -22971540 + (TATG)n Simple_repeat Simple_repeat 2 32 0 5 1136 240 35 0 0 chr17 72301117 72301146 -22971505 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1136 774 50 0 0 chr17 72301146 72301244 -22971407 + (GA)n Simple_repeat Simple_repeat 2 100 0 5 1136 399 293 43 43 chr17 72301403 72301542 -22971109 + Charlie12 DNA MER1_type 29 167 -2706 5 1136 541 285 0 44 chr17 72301418 72301576 -22971075 - RMER30 DNA MER1_type -42 160 10 5 1136 432 206 0 0 chr17 72301902 72301975 -22970676 + ID_B1 SINE B4 152 224 0 5 1136 338 107 0 18 chr17 72302019 72302076 -22970575 + (TAA)n Simple_repeat Simple_repeat 2 57 0 5 1136 761 266 103 23 chr17 72304733 72304995 -22967656 - B4A SINE B4 -8 284 2 5 1136 207 0 0 0 chr17 72305014 72305037 -22967614 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 5 1136 284 269 11 21 chr17 72305282 72305377 -22967274 + GA-rich Low_complexity Low_complexity 2 95 0 5 1136 4841 40 0 3 chr17 72307199 72307770 -22964881 - L1Md_T LINE L1 0 6582 6014 5 1136 732 199 10 16 chr17 72308819 72309133 -22963518 + CT-rich Low_complexity Low_complexity 1 311 0 5 1136 411 238 186 132 chr17 72309159 72309401 -22963250 + MLT1J2 LTR MaLR 51 305 -143 5 1136 682 266 121 27 chr17 72310183 72310313 -22962338 - B4A SINE B4 -42 250 109 5 1136 206 0 0 65 chr17 72310313 72310344 -22962307 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 5 1136 744 188 15 22 chr17 72310344 72310480 -22962171 - B1_Mur1 SINE Alu -14 135 1 5 1136 682 266 121 27 chr17 72310480 72310572 -22962079 - B4A SINE B4 -184 108 7 5 1136 453 319 18 24 chr17 72310807 72310971 -22961680 + MIRb SINE MIR 100 262 -6 5 1136 263 326 98 0 chr17 72311908 72312000 -22960651 + MARNA DNA Mariner 68 168 -418 5 1136 185 333 79 22 chr17 72312638 72312727 -22959924 - L2a LINE L2 -11 3415 3322 5 1136 190 342 47 112 chr17 72314864 72315078 -22957573 + MIRb SINE MIR 20 219 -49 5 1136 257 333 16 65 chr17 72315330 72315490 -22957161 - MIRm SINE MIR -100 176 13 5 1136 1477 234 21 126 chr17 72315965 72316326 -22956325 + MTEa LTR MaLR 1 318 -61 5 1136 2409 101 0 0 chr17 72316326 72316653 -22955998 + ORR1A2 LTR MaLR 1 327 0 5 1136 1477 234 21 126 chr17 72316653 72316711 -22955940 + MTEa LTR MaLR 319 376 -3 5 1136 180 0 0 0 chr17 72316997 72317017 -22955634 + (GA)n Simple_repeat Simple_repeat 1 20 0 5 1136 423 0 0 0 chr17 72317490 72317537 -22955114 + (TC)n Simple_repeat Simple_repeat 1 47 0 5 1136 356 254 14 0 chr17 72318722 72318812 -22953839 - ID4_ SINE ID -52 100 6 5 1136 218 244 125 25 chr17 72319002 72319082 -22953569 + L2 LINE L2 2833 2920 -499 5 1136 222 365 0 9 chr17 72319208 72319313 -22953338 + G-rich Low_complexity Low_complexity 2 105 0 5 1136 670 167 79 0 chr17 72319886 72320012 -22952639 - B1_Mus1 SINE Alu -12 136 1 5 1136 323 280 20 20 chr17 72320089 72320191 -22952460 + MER5A1 DNA MER1_type 11 112 -54 5 1136 329 254 50 56 chr17 72320526 72320705 -22951946 - MER5B DNA MER1_type 0 178 1 5 1136 410 323 62 124 chr17 72321068 72321245 -22951406 - B4 SINE B4 0 292 127 5 1136 1240 98 16 27 chr17 72321243 72321431 -22951220 - B2_Mm2 SINE B2 -8 187 2 5 1136 474 328 7 28 chr17 72321431 72321559 -22951092 - B4 SINE B4 -166 126 2 5 1136 438 150 0 111 chr17 72321562 72321652 -22950999 - MT2B LTR ERVL -348 253 174 5 1136 619 58 0 75 chr17 72321576 72321669 -22950982 - B1_Mus1 SINE Alu -62 86 1 5 1136 263 322 86 55 chr17 72322068 72322196 -22950455 + ORR1E LTR MaLR 1 132 -227 5 1136 332 278 80 105 chr17 72322227 72322517 -22950134 + ORR1E LTR MaLR 80 356 -14 5 1136 291 380 0 9 chr17 72322741 72322850 -22949801 + MER5A1 DNA MER1_type 18 125 -41 5 1136 252 130 0 0 chr17 72322976 72323022 -22949629 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 1136 360 0 0 0 chr17 72323570 72323610 -22949041 + (T)n Simple_repeat Simple_repeat 1 40 0 5 1136 559 328 100 51 chr17 72323875 72324206 -22948445 + ORR1E LTR MaLR 11 357 -2 5 1136 314 275 119 22 chr17 72324923 72325057 -22947594 + L1ME4a LINE L1 5976 6122 -2 5 1136 330 152 0 0 chr17 72325739 72325798 -22946853 + (TG)n Simple_repeat Simple_repeat 1 59 0 5 1136 425 335 45 36 chr17 72326012 72326232 -22946419 - Charlie13b DNA Charlie -193 319 98 5 1136 370 292 78 45 chr17 72326714 72326893 -22945758 + MIRb SINE MIR 35 219 -49 5 1136 198 0 0 0 chr17 72327002 72327024 -22945627 + (TTA)n Simple_repeat Simple_repeat 3 24 0 5 1136 1129 85 12 6 chr17 72327024 72327190 -22945461 - L1_Mus3 LINE L1 -19 6619 6453 5 1136 1111 114 162 20 chr17 72328899 72329096 -22943555 - URR1B DNA MER1_type 0 225 1 5 1136 306 0 0 0 chr17 72329368 72329402 -22943249 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 5 1136 342 0 0 0 chr17 72329962 72330000 -22942651 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1136 299 25 25 0 chr17 72330535 72330575 -22942076 + (TAAAAA)n Simple_repeat Simple_repeat 4 44 0 5 1136 417 109 0 0 chr17 72331789 72331853 -22940798 + (CAA)n Simple_repeat Simple_repeat 3 66 0 5 1136 302 298 87 71 chr17 72333202 72333386 -22939265 - MIR SINE MIR -46 216 30 5 1136 321 253 69 57 chr17 72337503 72337662 -22934989 + L1ME4a LINE L1 5963 6123 -1 5 1136 355 285 43 15 chr17 72338651 72338793 -22933858 + MIR SINE MIR 28 182 -86 5 1136 380 248 119 0 chr17 72339049 72339195 -22933456 + ID_B1 SINE B4 1 216 -8 5 1136 1225 318 73 21 chr17 72339903 72340584 -22932067 + L1MB8 LINE L1 5461 6177 -1 5 1136 691 270 70 34 chr17 72340987 72341180 -22931471 - B3A SINE B2 -9 186 9 5 1136 266 253 38 51 chr17 72341109 72341188 -22931463 - RSINE1 SINE B4 -85 80 3 5 1136 936 51 0 0 chr17 72342174 72342292 -22930359 + (TTC)n Simple_repeat Simple_repeat 2 119 0 5 1136 1135 50 14 7 chr17 72342296 72342438 -22930213 - B1_Mus1 SINE Alu -5 143 1 5 1136 362 244 101 51 chr17 72343062 72343200 -22929451 - MIRc SINE MIR -105 163 19 5 1136 562 278 148 110 chr17 72343426 72343717 -22928934 + RMER15 LTR ERVL 274 575 0 5 1136 443 260 139 17 chr17 72344162 72344342 -22928309 + MLT1D LTR MaLR 13 214 -291 5 1136 279 320 89 70 chr17 72344761 72344919 -22927732 + MLT1D LTR MaLR 255 415 -90 5 1136 364 326 0 0 chr17 72344944 72345042 -22927609 + MLT1D LTR MaLR 528 625 -2 5 1136 1244 296 40 57 chr17 72345509 72346014 -22926637 + RMER5 LTR ERV1 38 533 -1 5 1136 3226 50 0 2 chr17 72346637 72347034 -22925617 + L1Md_F2 LINE L1 6179 6574 -8 5 1136 222 37 0 0 chr17 72347044 72347071 -22925580 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1136 953 247 16 29 chr17 72347644 72347886 -22924765 - L1M5 LINE L1 -402 5722 5484 5 1136 217 329 49 0 chr17 72348435 72348517 -22924134 + L2c LINE L2 3241 3326 -61 5 17 3633 18 0 0 chr17 72351512 72351908 -22920743 - MTA_Mm LTR MaLR 0 396 1 5 1137 9607 9 19 4 chr17 72351908 72352990 -22919661 - MTA_Mm-int LTR MaLR 0 1098 1 5 1137 3665 10 0 0 chr17 72352990 72353386 -22919265 - MTA_Mm LTR MaLR 0 396 1 5 1137 24 32 0 0 chr17 72354614 72354645 -22918006 + AT_rich Low_complexity Low_complexity 1 31 0 5 1137 767 178 137 44 chr17 72354656 72354838 -22917813 - B3 SINE B2 -16 200 2 5 1137 192 77 0 0 chr17 72355011 72355037 -22917614 + (TGGGGG)n Simple_repeat Simple_repeat 3 28 0 5 1137 30 0 0 0 chr17 72355379 72355409 -22917242 + AT_rich Low_complexity Low_complexity 1 30 0 5 1137 259 269 110 63 chr17 72356039 72356166 -22916485 - MIRb SINE MIR -110 158 26 5 1137 377 284 65 17 chr17 72356290 72356429 -22916222 + PB1D9 SINE Alu 11 148 -1 5 1137 359 252 73 73 chr17 72356723 72356860 -22915791 - MTEa LTR MaLR -7 372 236 5 1137 249 318 0 0 chr17 72357428 72357494 -22915157 + L2a LINE L2 3361 3426 0 5 1137 818 188 6 0 chr17 72358203 72358373 -22914278 + GA-rich Low_complexity Low_complexity 1 171 0 5 1137 329 243 95 63 chr17 72358518 72358676 -22913975 + L1M3 LINE L1 5453 5615 -556 5 1137 877 275 5 9 chr17 72359067 72359287 -22913364 + ID_B1 SINE B4 2 220 -4 5 1137 658 254 0 14 chr17 72359716 72359860 -22912791 + B1F1 SINE Alu 5 146 -3 5 1137 230 305 10 31 chr17 72360210 72360280 -22912371 + (TATG)n Simple_repeat Simple_repeat 4 74 0 5 1137 219 139 0 0 chr17 72360280 72360316 -22912335 + (CATG)n Simple_repeat Simple_repeat 2 37 0 5 1137 230 305 10 31 chr17 72360316 72360343 -22912308 + (TATG)n Simple_repeat Simple_repeat 3 27 0 5 1137 253 302 0 0 chr17 72360343 72360406 -22912245 - Tigger5 DNA MER2_type 0 2406 2344 5 1137 1934 158 58 9 chr17 72360414 72360740 -22911911 + ORR1C2 LTR MaLR 43 384 0 5 1137 479 335 118 14 chr17 72360791 72361012 -22911639 - Tigger5 DNA MER2_type -2162 244 1 5 1137 259 315 70 35 chr17 72361013 72361184 -22911467 + L1M5 LINE L1 5534 5710 -414 5 1137 256 262 75 0 chr17 72362516 72362596 -22910055 - MIRb SINE MIR -71 197 112 5 1137 405 0 0 0 chr17 72362662 72362707 -22909944 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 1137 1191 30 0 0 chr17 72362707 72362841 -22909810 - B1_Mm SINE Alu -13 134 1 5 1137 263 327 76 9 chr17 72364382 72364487 -22908164 - MER5A DNA MER1_type -72 117 6 5 1137 1068 109 28 44 chr17 72365261 72365443 -22907208 - URR1A DNA MER1_type 0 226 48 5 1137 264 329 0 0 chr17 72369796 72369875 -22902776 + MADE2 DNA Mariner 1 79 -1 6 1137 748 266 0 28 chr17 72371534 72371712 -22900939 + MER63A DNA AcHobo 38 210 0 6 1137 466 355 45 16 chr17 72371845 72372091 -22900560 - MIR SINE MIR -9 253 1 6 1137 477 0 0 0 chr17 72372122 72372175 -22900476 + (GAAA)n Simple_repeat Simple_repeat 2 54 0 6 1137 560 275 194 0 chr17 72372193 72372426 -22900225 + B4A SINE B4 15 292 0 6 1137 519 17 0 0 chr17 72372457 72372517 -22900134 + (CA)n Simple_repeat Simple_repeat 1 60 0 6 1137 1042 223 125 12 chr17 72375107 72375149 -22897502 + L1MA6 LINE L1 5920 5962 -338 6 1137 428 0 19 0 chr17 72375149 72375201 -22897450 + (GA)n Simple_repeat Simple_repeat 1 53 0 6 1137 1042 223 125 12 chr17 72375201 72375494 -22897157 + L1MA6 LINE L1 5963 6292 -8 6 1137 427 210 19 39 chr17 72375532 72375636 -22897015 + L1MB1 LINE L1 6060 6161 -7 6 1137 306 0 0 0 chr17 72375662 72375696 -22896955 + (CTAA)n Simple_repeat Simple_repeat 3 36 0 6 1137 226 308 0 13 chr17 72376315 72376394 -22896257 + (CATA)n Simple_repeat Simple_repeat 4 81 0 6 1137 2103 247 60 33 chr17 72376647 72377350 -22895301 - L1MA6 LINE L1 -284 6016 5295 6 1137 340 320 10 119 chr17 72377723 72378035 -22894616 + B4A SINE B4 3 280 -12 6 1137 351 0 0 0 chr17 72378061 72378100 -22894551 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1137 414 371 53 16 chr17 72379020 72379209 -22893442 + AmnSINE1 SINE SINE 261 456 -119 6 1137 332 222 0 14 chr17 72379358 72379431 -22893220 + MIR SINE MIR 82 153 -55 6 1137 212 103 25 25 chr17 72380067 72380107 -22892544 + CT-rich Low_complexity Low_complexity 1 40 0 6 1137 783 163 0 0 chr17 72381216 72381470 -22891181 + (CA)n Simple_repeat Simple_repeat 1 254 0 6 1137 336 113 0 19 chr17 72381471 72381525 -22891126 + HAL1-3A_ME LINE L1 1976 2028 -830 6 1137 1053 118 0 4 chr17 72381525 72381754 -22890897 + (CA)n Simple_repeat Simple_repeat 1 228 0 6 1137 29 78 0 0 chr17 72383918 72383982 -22888669 + AT_rich Low_complexity Low_complexity 1 64 0 6 1137 486 251 43 100 chr17 72384657 72384887 -22887764 - ID_B1 SINE B4 -6 218 2 6 1137 185 339 36 0 chr17 72385420 72385476 -22887175 - L2b LINE L2 -10 3365 3308 6 1137 216 277 0 0 chr17 72386016 72386063 -22886588 + polypyrimidine Low_complexity Low_complexity 4 50 0 6 1137 896 172 173 25 chr17 72386394 72386591 -22886060 - URR1A DNA MER1_type 0 226 1 6 1137 743 247 75 4 chr17 72386709 72386949 -22885702 + L1MA5 LINE L1 5877 6133 -167 6 1137 579 296 45 115 chr17 72386956 72387269 -22885382 + B4 SINE B4 2 292 0 6 1137 488 244 0 13 chr17 72387270 72387424 -22885227 + (CATA)n Simple_repeat Simple_repeat 4 155 0 6 1137 849 278 79 29 chr17 72389900 72390178 -22882473 + B4 SINE B4 1 292 0 6 1137 682 169 22 0 chr17 72391273 72391547 -22881104 + CT-rich Low_complexity Low_complexity 1 279 0 6 1137 21 0 0 0 chr17 72392279 72392300 -22880351 + AT_rich Low_complexity Low_complexity 1 21 0 6 1137 281 340 30 78 chr17 72392974 72393204 -22879447 - MIRb SINE MIR -36 232 14 6 1137 229 211 0 19 chr17 72393578 72393631 -22879020 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 1137 858 62 15 15 chr17 72393648 72393779 -22878872 + (GGGAGA)n Simple_repeat Simple_repeat 3 133 0 6 1137 315 0 0 0 chr17 72393781 72393816 -22878835 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1137 528 258 91 61 chr17 72393916 72394081 -22878570 - B4 SINE B4 -120 172 3 6 1137 619 12 0 24 chr17 72395480 72395562 -22877089 + (TG)n Simple_repeat Simple_repeat 1 80 0 6 1137 498 33 0 0 chr17 72395562 72395621 -22877030 + (GA)n Simple_repeat Simple_repeat 1 60 0 6 1137 238 324 37 32 chr17 72396643 72396831 -22875820 + MIR SINE MIR 70 258 -4 6 1137 906 148 0 21 chr17 72397665 72397810 -22874841 + B1_Mur4 SINE Alu 1 142 -8 6 1137 468 0 0 0 chr17 72399486 72399538 -22873113 + (TC)n Simple_repeat Simple_repeat 1 52 0 6 1137 405 0 0 0 chr17 72399538 72399582 -22873069 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1137 315 0 0 0 chr17 72400382 72400417 -22872234 + (T)n Simple_repeat Simple_repeat 1 35 0 6 1137 24 32 0 0 chr17 72400785 72400816 -22871835 + AT_rich Low_complexity Low_complexity 1 31 0 6 1137 538 71 24 0 chr17 72401973 72402057 -22870594 + (CATA)n Simple_repeat Simple_repeat 3 88 0 6 1137 22921 101 7 4 chr17 72402460 72404510 -22868141 + L1_Mus1 LINE L1 2622 4675 -1208 6 1137 3739 91 19 10 chr17 72404510 72405031 -22867620 + L1Md_F2 LINE L1 6053 6578 -4 6 1137 22921 71 14 2 chr17 72405031 72406886 -22865765 + L1_Mus1 LINE L1 4676 6557 -10 6 1137 270 95 0 0 chr17 72406886 72406928 -22865723 + (TAA)n Simple_repeat Simple_repeat 1 42 0 6 1137 348 306 8 0 chr17 72407338 72407459 -22865192 + (TG)n Simple_repeat Simple_repeat 2 123 0 6 1137 634 291 182 0 chr17 72407476 72407723 -22864928 - B4A SINE B4 0 292 1 6 1137 402 74 0 0 chr17 72409147 72409201 -22863450 + (CCAA)n Simple_repeat Simple_repeat 2 55 0 6 1137 3873 46 0 2 chr17 72409819 72410276 -22862375 + L1_Mus2 LINE L1 6109 6564 -2 6 1137 234 385 48 0 chr17 72410622 72410726 -22861925 + MIRc SINE MIR 48 156 -112 6 1137 279 54 0 0 chr17 72410771 72410808 -22861843 + (CCAA)n Simple_repeat Simple_repeat 2 38 0 6 1137 761 280 54 37 chr17 72413194 72413435 -22859216 + B4A SINE B4 48 292 0 6 1137 534 103 0 0 chr17 72413495 72413573 -22859078 + (CA)n Simple_repeat Simple_repeat 1 78 0 6 1137 182 222 44 0 chr17 72413952 72414042 -22858609 + CT-rich Low_complexity Low_complexity 4 97 0 6 1137 486 281 8 6 chr17 72414052 72414206 -22858445 + MIR SINE MIR 18 169 -39 6 1137 304 363 106 19 chr17 72414446 72414758 -22857893 + Tigger13a DNA MER2_type 332 670 -101 6 1137 252 129 33 56 chr17 72415340 72415430 -22857221 + CT-rich Low_complexity Low_complexity 3 90 0 6 1137 393 234 35 26 chr17 72416776 72416890 -22855761 + ORR1D2 LTR MaLR 242 356 -14 6 1137 886 307 21 21 chr17 72417043 72417382 -22855269 - MTE2b LTR MaLR -40 339 1 6 1137 1782 146 75 9 chr17 72418628 72418946 -22853705 - RMER1C Other Other 0 1342 1004 6 1137 453 81 0 0 chr17 72418946 72419008 -22853643 + (TC)n Simple_repeat Simple_repeat 2 63 0 6 1137 203 322 75 17 chr17 72421049 72421169 -22851482 - L3 LINE CR1 -512 3977 3851 6 1137 962 80 7 0 chr17 72421773 72421910 -22850741 + (TTCTC)n Simple_repeat Simple_repeat 3 140 0 6 1137 1224 101 0 0 chr17 72421914 72422092 -22850559 + (TCTCC)n Simple_repeat Simple_repeat 3 180 0 6 1137 810 62 0 0 chr17 72422130 72422243 -22850408 + (TTTC)n Simple_repeat Simple_repeat 2 114 0 6 1137 349 254 114 0 chr17 72422245 72422359 -22850292 - B1F SINE Alu -13 136 10 6 1137 441 0 0 0 chr17 72422408 72422457 -22850194 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1137 658 305 7 7 chr17 72422471 72422623 -22850028 - RSINE1 SINE B4 -11 154 3 6 1137 1459 149 18 0 chr17 72422651 72422873 -22849778 + URR1A DNA MER1_type 1 226 0 6 1137 956 254 69 41 chr17 72423306 72423626 -22849025 - MTEa LTR MaLR 0 379 51 6 1137 7982 102 9 8 chr17 72423666 72425277 -22847374 + Lx LINE L1 5042 6654 0 6 1137 525 32 0 0 chr17 72426562 72426625 -22846026 + (TC)n Simple_repeat Simple_repeat 1 63 0 6 1137 471 38 723 8 chr17 72427373 72427467 -22845184 + B2_Mm1t SINE B2 1 161 -32 6 1137 247 314 155 31 chr17 72427810 72428004 -22844647 - MIRb SINE MIR -16 252 35 6 1137 549 80 0 0 chr17 72428500 72428575 -22844076 + (CAT)n Simple_repeat Simple_repeat 2 76 0 6 1137 234 0 0 0 chr17 72428587 72428613 -22844038 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 1137 339 125 45 45 chr17 72428622 72428689 -22843962 - HAL1-3A_ME LINE L1 -824 2034 1968 6 1137 186 133 0 0 chr17 72428777 72428807 -22843844 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1137 279 192 0 0 chr17 72428863 72428941 -22843710 + CT-rich Low_complexity Low_complexity 1 78 0 6 1137 667 285 62 65 chr17 72430045 72430383 -22842268 + ORR1E LTR MaLR 21 357 -2 6 1137 263 324 206 0 chr17 72430522 72430658 -22841993 - MIR3 SINE MIR -42 166 3 6 1137 356 260 502 24 chr17 72430786 72430997 -22841654 + MamRep434 DNA TcMar 115 426 0 6 1137 5514 64 3 3 chr17 72431259 72431952 -22840699 + L1_Mus3 LINE L1 5945 6637 -1 6 1137 2148 257 52 67 chr17 72432053 72432862 -22839789 + RMER13A LTR ERVK 1 797 -63 6 1137 762 319 114 22 chr17 72432911 72433027 -22839624 + ORR1E LTR MaLR 1 131 -228 6 1137 213 39 0 0 chr17 72433027 72433053 -22839598 + (TC)n Simple_repeat Simple_repeat 2 27 0 6 1137 762 319 114 22 chr17 72433053 72433260 -22839391 + ORR1E LTR MaLR 132 354 -5 6 1137 523 263 118 101 chr17 72433579 72433875 -22838776 + MLT2B2 LTR ERVL 9 309 -206 6 1137 412 18 35 0 chr17 72433954 72434011 -22838640 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 6 1137 22 0 0 0 chr17 72434367 72434389 -22838262 + AT_rich Low_complexity Low_complexity 1 22 0 6 1137 2316 79 28 12 chr17 72435253 72435574 -22837077 - ORR1A2 LTR MaLR -1 326 1 6 1137 784 278 101 12 chr17 72435768 72436016 -22836635 - B4A SINE B4 -8 284 15 6 1137 396 0 0 0 chr17 72440169 72440213 -22832438 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1137 226 331 86 12 chr17 72440645 72440807 -22831844 + MIRb SINE MIR 66 239 -29 6 1137 2125 133 82 8 chr17 72440867 72441223 -22831428 - ORR1C2 LTR MaLR -2 382 1 6 1137 1665 306 125 62 chr17 72441248 72442071 -22830580 + L1M4b LINE L1 4 884 -6450 6 1137 243 0 0 0 chr17 72442071 72442098 -22830553 + (CAA)n Simple_repeat Simple_repeat 2 28 0 6 1137 1665 306 125 62 chr17 72442098 72442282 -22830369 + L1M4b LINE L1 885 1074 -6260 6 1137 837 251 174 6 chr17 72442508 72442864 -22829787 + L1M4b LINE L1 2068 2483 -4851 6 1137 549 282 77 7 chr17 72442937 72443080 -22829571 - B3A SINE B2 -35 163 11 6 1137 1506 194 192 19 chr17 72443083 72443713 -22828938 + L1M4b LINE L1 2562 3300 -4034 6 1137 1511 293 97 58 chr17 72443836 72445257 -22827394 + L1M4b LINE L1 3552 5027 -1979 6 1137 772 273 103 35 chr17 72445658 72446064 -22826587 + L1M4b LINE L1 5285 5718 -1288 6 1137 953 261 92 30 chr17 72446343 72446778 -22825873 + L1M4b LINE L1 5733 6194 -812 6 1137 374 303 138 0 chr17 72446823 72446975 -22825676 - MER58A DNA MER1_type -35 189 17 7 1137 357 189 35 26 chr17 72447396 72447510 -22825141 + (CAGAGA)n Simple_repeat Simple_repeat 6 120 0 7 1137 693 157 0 0 chr17 72447521 72447655 -22824996 + GA-rich Low_complexity Low_complexity 2 135 0 7 1137 260 279 125 28 chr17 72448830 72448974 -22823677 + MIR3 SINE MIR 42 199 -9 7 1137 387 278 34 14 chr17 72449176 72449322 -22823329 - MER5A1 DNA MER1_type 0 166 18 7 1137 385 315 23 0 chr17 72450533 72450663 -22821988 - MIR3 SINE MIR -8 200 68 7 1137 259 267 19 19 chr17 72451916 72452019 -22820632 + MLT1A1 LTR MaLR 305 407 -1 7 1137 238 248 78 87 chr17 72453011 72453126 -22819525 + MER90 LTR ERV1 1 114 -461 7 1137 689 275 101 28 chr17 72453171 72453459 -22819192 - MTEa LTR MaLR -62 317 9 7 1137 518 176 157 0 chr17 72453576 72453678 -22818973 + B1_Mur1 SINE Alu 10 127 -22 7 1137 405 0 0 0 chr17 72453698 72453743 -22818908 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 1137 530 318 60 51 chr17 72453746 72454081 -22818570 + MER90 LTR ERV1 229 566 -9 7 1137 2388 171 52 52 chr17 72455339 72455798 -22816853 + RLTR20B2 LTR ERVK 1 464 -96 7 1137 261 0 0 0 chr17 72455798 72455827 -22816824 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 1137 2388 171 52 52 chr17 72455827 72455927 -22816724 + RLTR20B2 LTR ERVK 465 560 0 7 1137 493 273 148 15 chr17 72456470 72456734 -22815917 + MLT1C LTR MaLR 3 301 -166 7 1137 304 40 40 0 chr17 72457442 72457492 -22815159 + (TTTTTG)n Simple_repeat Simple_repeat 3 54 0 7 1137 307 255 116 51 chr17 72458734 72458922 -22813729 + MIRc SINE MIR 2 197 -11 7 1137 192 196 20 61 chr17 72459549 72459598 -22813053 - MIRm SINE MIR -118 158 112 7 1137 309 219 61 94 chr17 72460136 72460317 -22812334 - ORSL DNA Tip100 -21 254 80 7 1137 211 175 92 31 chr17 72461150 72461215 -22811436 + MIRb SINE MIR 51 119 -149 7 1137 211 213 133 0 chr17 72462253 72462328 -22810323 - MIR3 SINE MIR -12 196 112 7 1137 3040 23 0 6 chr17 72462745 72463093 -22809558 + ORR1A0 LTR MaLR 1 346 0 7 1137 424 269 35 21 chr17 72463357 72463501 -22809150 + B1F SINE Alu 3 148 -1 7 1137 206 180 39 39 chr17 72465334 72465386 -22807265 - L3 LINE CR1 -10 4479 4428 7 1137 423 312 24 24 chr17 72465522 72465686 -22806965 + RSINE1 SINE B4 2 165 0 7 1137 184 280 51 88 chr17 72466545 72466682 -22805969 + MIRb SINE MIR 56 187 -81 7 1137 190 283 19 0 chr17 72467084 72467137 -22805514 + MER5A DNA MER1_type 73 126 -63 7 1137 398 280 251 0 chr17 72467324 72467499 -22805152 - ID_B1 SINE B4 -5 219 1 7 1137 1376 283 107 50 chr17 72468285 72469360 -22803291 - Lx8 LINE L1 -1548 5925 4761 7 1137 315 302 58 58 chr17 72469549 72469756 -22802895 + MER3 DNA MER1_type 3 209 0 7 1137 329 370 37 28 chr17 72469856 72470070 -22802581 + L2b LINE L2 2941 3156 -219 7 1137 452 267 75 89 chr17 72470255 72470547 -22802104 + L1MC4a LINE L1 7234 7521 -361 7 1137 258 287 136 26 chr17 72470985 72471140 -22801511 - MIRm SINE MIR -12 250 80 7 1137 3260 56 2 2 chr17 72471673 72472069 -22800582 - MTA_Mm LTR MaLR 0 396 1 7 1137 665 226 82 26 chr17 72472637 72472832 -22799819 + MTD LTR MaLR 214 419 0 7 1137 1216 248 73 44 chr17 72472832 72473242 -22799409 + MTD-int LTR MaLR 1 422 -836 7 1137 1211 219 143 57 chr17 72473235 72473709 -22798942 + MTD-int LTR MaLR 744 1258 0 7 1137 845 275 101 29 chr17 72473768 72474113 -22798538 + MTD LTR MaLR 49 418 -1 7 1137 536 259 58 17 chr17 72474153 72474326 -22798325 + L1M3 LINE L1 5439 5618 -562 7 1137 261 333 0 27 chr17 72474391 72474502 -22798149 + MTEa LTR MaLR 1 108 -271 7 1137 825 242 84 123 chr17 72474562 72474953 -22797698 + MTE2a LTR MaLR 4 379 0 7 1137 757 256 65 29 chr17 72474956 72475201 -22797450 + MTE2a-int LTR MaLR 5 258 -1322 7 1137 1379 209 60 7 chr17 72475707 72476005 -22796646 + MTD LTR MaLR 3 316 -103 7 1137 270 336 53 0 chr17 72476229 72476342 -22796309 - MIRb SINE MIR -17 251 133 7 1137 191 88 29 0 chr17 72476622 72476656 -22795995 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 1137 707 257 24 18 chr17 72477656 72477826 -22794825 - B3A SINE B2 -27 171 1 7 1137 3888 45 15 2 chr17 72478470 72478939 -22793712 + MT2C_Mm LTR ERVL 1 475 0 7 1137 705 43 0 0 chr17 72478941 72479035 -22793616 + MT-int LTR MaLR 1 94 -1004 7 1137 851 58 17 0 chr17 72479037 72479157 -22793494 + MTB_Mm LTR MaLR 286 407 0 7 1137 1361 219 68 27 chr17 72479170 72479507 -22793144 + MTD LTR MaLR 57 407 -12 7 1137 302 250 66 0 chr17 72479637 72479713 -22792938 - ID4_ SINE ID 0 83 3 7 1137 618 199 4 55 chr17 72479753 72479895 -22792756 - B3 SINE B2 -36 162 22 7 1137 490 248 8 0 chr17 72481065 72481198 -22791453 - Lx9 LINE L1 0 7644 7511 7 1137 253 325 76 17 chr17 72481275 72481447 -22791204 + L1MEc LINE L1 66 247 -6153 7 1137 263 285 226 7 chr17 72481665 72481948 -22790703 + L1MEc LINE L1 624 968 -5432 7 1137 437 328 29 12 chr17 72482243 72482416 -22790235 + MER20 DNA MER1_type 39 214 -5 7 1137 248 225 56 0 chr17 72482422 72482493 -22790158 + L1MEc LINE L1 1110 1184 -5216 7 142 700 286 98 33 chr17 72482810 72483259 -22789392 + L1MEc LINE L1 1658 2135 -4265 7 1138 438 20 0 0 chr17 72483269 72483320 -22789331 + (GA)n Simple_repeat Simple_repeat 1 51 0 7 1138 239 255 0 0 chr17 72483528 72483609 -22789042 + (CATATA)n Simple_repeat Simple_repeat 1 81 0 7 1138 230 266 0 7 chr17 72483612 72483752 -22788899 + (CA)n Simple_repeat Simple_repeat 2 140 0 7 1138 21 0 0 0 chr17 72484261 72484282 -22788369 + AT_rich Low_complexity Low_complexity 1 21 0 7 1138 405 0 0 0 chr17 72484622 72484667 -22787984 + (GA)n Simple_repeat Simple_repeat 1 45 0 7 1138 3746 176 48 82 chr17 72484896 72485654 -22786997 + RMER13B LTR ERVK 1 759 -149 7 1138 3333 30 20 12 chr17 72485654 72486062 -22786589 + IAPLTR2a LTR ERVK 1 411 0 7 1138 3746 176 48 82 chr17 72486062 72486239 -22786412 + RMER13B LTR ERVK 760 904 -4 7 1138 261 315 94 82 chr17 72486278 72486593 -22786058 + ORR1D2 LTR MaLR 20 365 -14 7 1138 756 278 186 34 chr17 72486797 72487245 -22785406 + Charlie1b DNA MER1_type 3 518 -5 7 1138 180 0 0 0 chr17 72488490 72488510 -22784141 + (TA)n Simple_repeat Simple_repeat 1 20 0 7 1138 198 0 0 0 chr17 72488751 72488773 -22783878 + (TG)n Simple_repeat Simple_repeat 1 22 0 7 1138 642 26 0 0 chr17 72488773 72488848 -22783803 + (GA)n Simple_repeat Simple_repeat 1 76 0 7 1138 727 305 156 28 chr17 72489441 72490150 -22782501 + L1M5 LINE L1 4369 5162 -984 7 1138 240 35 0 0 chr17 72490150 72490179 -22782472 + (CAA)n Simple_repeat Simple_repeat 2 30 0 7 1138 727 199 87 58 chr17 72490179 72490346 -22782305 + L1M5 LINE L1 5163 5358 -804 7 1138 227 164 0 16 chr17 72490425 72490487 -22782164 + CT-rich Low_complexity Low_complexity 2 62 0 7 1138 273 57 0 0 chr17 72490510 72490545 -22782106 + (TCCC)n Simple_repeat Simple_repeat 1 35 0 7 1138 931 126 6 6 chr17 72490548 72490708 -22781943 + (TTTC)n Simple_repeat Simple_repeat 1 160 0 7 1138 771 246 0 59 chr17 72491014 72491200 -22781451 + B3A SINE B2 9 183 -15 7 1138 505 52 13 13 chr17 72491200 72491278 -22781373 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 7 1138 22 80 0 0 chr17 72491296 72491346 -22781305 + AT_rich Low_complexity Low_complexity 1 50 0 7 1138 324 343 20 0 chr17 72492669 72492768 -22779883 + Charlie12 DNA MER1_type 1 101 -2772 7 1138 527 304 100 78 chr17 72492808 72492934 -22779717 - B4A SINE B4 -15 277 165 7 1138 1777 178 143 14 chr17 72492934 72493305 -22779346 - MTD LTR MaLR 0 419 1 7 1138 527 304 100 78 chr17 72493305 72493449 -22779202 - B4A SINE B4 -128 164 1 7 1138 214 139 47 0 chr17 72493453 72493496 -22779155 + (TGAG)n Simple_repeat Simple_repeat 4 48 0 7 1138 21 0 0 0 chr17 72494843 72494864 -22777787 + AT_rich Low_complexity Low_complexity 1 21 0 7 1138 1200 55 7 0 chr17 72495649 72495794 -22776857 + B1_Mm SINE Alu 1 146 -1 7 1138 875 205 13 97 chr17 72495875 72496113 -22776538 - B4 SINE B4 -74 218 1 7 1138 2892 44 3 37 chr17 72496465 72496843 -22775808 + RLTR10B2 LTR ERVK 1 365 0 7 1138 210 105 0 0 chr17 72497759 72497797 -22774854 + (GA)n Simple_repeat Simple_repeat 1 38 0 7 1138 241 288 14 0 chr17 72499668 72499741 -22772910 + (TA)n Simple_repeat Simple_repeat 1 74 0 7 1138 567 301 52 38 chr17 72499741 72499769 -22772882 - B4A SINE B4 -3 289 265 7 1138 399 21 0 0 chr17 72499769 72499817 -22772834 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1138 567 301 52 38 chr17 72499817 72499999 -22772652 - B4A SINE B4 -28 264 76 7 1138 344 243 0 13 chr17 72500000 72500075 -22772576 - B4A SINE B4 -218 74 1 1 1138 23 54 0 0 chr17 72500151 72500188 -22772463 + AT_rich Low_complexity Low_complexity 1 37 0 2 1138 288 273 124 41 chr17 72500950 72500985 -22771666 - MER5A1 DNA MER1_type -7 159 119 3 1138 2144 141 44 57 chr17 72500985 72501368 -22771283 + ORR1C1 LTR MaLR 1 378 0 4 1138 288 273 124 41 chr17 72501368 72501477 -22771174 - MER5A1 DNA MER1_type -48 118 3 3 1138 325 240 106 0 chr17 72503005 72503109 -22769542 - MER5A1 DNA MER1_type -50 116 2 3 1138 194 274 148 45 chr17 72503114 72503202 -22769449 - MER5B DNA MER1_type -6 172 76 5 1138 2663 96 8 53 chr17 72503434 72503830 -22768821 + ORR1C1 LTR MaLR 1 378 0 6 1138 267 103 0 0 chr17 72504115 72504154 -22768497 + (TTCCC)n Simple_repeat Simple_repeat 4 42 0 7 1138 413 272 33 0 chr17 72504171 72504263 -22768388 - PB1D10 SINE Alu -8 109 15 8 1138 278 250 120 60 chr17 72504378 72504595 -22768056 - L1M5 LINE L1 -3131 3015 2786 9 1138 276 213 12 96 chr17 72505114 72505197 -22767454 - ID_B1 SINE B4 -63 161 86 1 1138 211 190 17 17 chr17 72505412 72505471 -22767180 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 1 1138 219 114 0 0 chr17 72507113 72507148 -22765503 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1138 934 241 80 0 chr17 72507166 72507428 -22765223 - B4 SINE B4 -2 290 8 1 1138 252 369 8 8 chr17 72507606 72507729 -22764922 + MIRc SINE MIR 61 183 -85 1 1138 720 99 0 0 chr17 72508029 72508140 -22764511 + (CA)n Simple_repeat Simple_repeat 1 111 0 1 1138 1428 139 0 0 chr17 72509012 72509242 -22763409 + Lx2 LINE L1 6768 6997 0 1 1138 688 37 0 44 chr17 72509274 72509387 -22763264 + (GAAA)n Simple_repeat Simple_repeat 1 108 0 1 1138 356 323 28 85 chr17 72510507 72510683 -22761968 + MER5A DNA MER1_type 22 187 -2 1 1138 1073 254 113 38 chr17 72510700 72511150 -22761501 - Charlie4a DNA MER1_type 0 508 25 1 1138 182 314 0 41 chr17 72511236 72511309 -22761342 - MIRc SINE MIR -108 160 91 2 1138 762 11 0 0 chr17 72511372 72511459 -22761192 + (TG)n Simple_repeat Simple_repeat 1 87 0 2 1138 208 295 51 0 chr17 72511460 72511538 -22761113 + L2a LINE L2 3345 3426 0 2 1138 748 299 54 24 chr17 72511563 72511896 -22760755 - ORR1E LTR MaLR -16 343 1 2 1138 419 95 0 13 chr17 72511928 72512003 -22760648 + (TG)n Simple_repeat Simple_repeat 1 74 0 2 1138 452 283 80 58 chr17 72512037 72512311 -22760340 - B4 SINE B4 -11 281 2 2 1138 759 32 0 0 chr17 72513264 72513358 -22759293 + (GA)n Simple_repeat Simple_repeat 1 94 0 2 1138 251 338 80 18 chr17 72513829 72513992 -22758659 + L3 LINE CR1 3310 3482 -1007 2 1138 231 260 39 52 chr17 72514426 72514503 -22758148 + MIRb SINE MIR 116 191 -77 2 1138 208 275 0 55 chr17 72515186 72515313 -22757338 + (TATAG)n Simple_repeat Simple_repeat 4 123 0 2 1138 362 310 135 55 chr17 72516055 72516294 -22756357 + LTR33 LTR ERVL 56 311 -204 3 1138 6052 58 4 0 chr17 72516294 72517030 -22755621 + L1_Mus1 LINE L1 5829 6567 0 3 1138 306 0 0 0 chr17 72517038 72517072 -22755579 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 1138 362 310 135 55 chr17 72517072 72517171 -22755480 + LTR33 LTR ERVL 317 430 -85 3 1138 297 0 0 0 chr17 72517947 72517980 -22754671 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1138 486 0 0 0 chr17 72517980 72518033 -22754618 + (TA)n Simple_repeat Simple_repeat 1 54 0 3 1138 1010 115 10 54 chr17 72518046 72518249 -22754402 + Lx3B LINE L1 6774 6967 -6 3 1138 201 74 0 0 chr17 72521022 72521049 -22751602 + (TCCC)n Simple_repeat Simple_repeat 2 28 0 3 1138 416 242 313 75 chr17 72522166 72522343 -22750308 - L1MB3 LINE L1 -55 6128 5891 3 1138 627 103 0 0 chr17 72522343 72522440 -22750211 + (TG)n Simple_repeat Simple_repeat 2 98 0 3 1138 416 258 101 119 chr17 72522440 72522607 -22750044 - L1MB3 LINE L1 -293 5890 5746 3 1138 217 143 17 67 chr17 72522645 72522705 -22749946 + (TATAA)n Simple_repeat Simple_repeat 1 57 0 3 1138 683 173 39 0 chr17 72524285 72524412 -22748239 + B1_Mus1 SINE Alu 11 142 -6 4 1138 638 109 10 0 chr17 72524419 72524520 -22748131 + (GA)n Simple_repeat Simple_repeat 2 103 0 4 1138 834 11 0 0 chr17 72524520 72524615 -22748036 + (GAA)n Simple_repeat Simple_repeat 3 97 0 4 1138 930 66 0 0 chr17 72524627 72524749 -22747902 + (GGAAA)n Simple_repeat Simple_repeat 5 126 0 4 1138 412 274 93 50 chr17 72525850 72526011 -22746640 - ORR1E LTR MaLR -174 185 18 4 1138 402 292 25 0 chr17 72526039 72526159 -22746492 + L2 LINE L2 2677 2799 -620 4 1138 330 22 0 61 chr17 72527253 72527293 -22745358 + HAL1-3A_ME LINE L1 1976 2014 -844 4 1138 837 44 57 33 chr17 72527293 72527503 -22745148 + (CAGAGA)n Simple_repeat Simple_repeat 1 214 0 4 1138 1755 265 52 22 chr17 72527836 72528434 -22744217 + L1MB3 LINE L1 5495 6110 -73 4 1138 523 263 114 55 chr17 72528491 72528712 -22743939 + ID_B1 SINE B4 7 237 -55 4 1138 183 184 0 0 chr17 72529733 72529771 -22742880 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1138 602 186 37 44 chr17 72531529 72531664 -22740987 - B3A SINE B2 -61 137 4 5 1138 327 341 73 0 chr17 72532665 72532788 -22739863 - RSINE1 SINE B4 -2 163 32 5 1138 555 316 55 49 chr17 72532796 72533157 -22739494 - L1M5 LINE L1 -478 5825 5464 5 1138 1056 62 0 64 chr17 72533233 72533389 -22739262 + B1_Mus2 SINE Alu 2 147 0 5 1138 560 212 0 8 chr17 72533389 72533522 -22739129 + GA-rich Low_complexity Low_complexity 1 132 0 5 1138 24 32 0 0 chr17 72533615 72533646 -22739005 + AT_rich Low_complexity Low_complexity 1 31 0 5 1138 426 287 152 6 chr17 72533646 72533804 -22738847 - ID_B1 SINE B4 -41 183 3 5 1138 375 203 0 0 chr17 72533960 72534034 -22738617 + B3A SINE B2 2 75 -123 5 1138 495 185 0 0 chr17 72534101 72534252 -22738399 + GA-rich Low_complexity Low_complexity 2 152 0 5 1138 192 149 0 0 chr17 72534256 72534303 -22738348 + (TA)n Simple_repeat Simple_repeat 1 47 0 6 1138 210 118 0 0 chr17 72534321 72534355 -22738296 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 6 1138 197 337 59 24 chr17 72534456 72534541 -22738110 + L2 LINE L2 2302 2389 -1030 6 1138 7067 119 23 1 chr17 72534657 72535924 -22736727 + Lx2 LINE L1 5348 6640 -357 6 1138 1240 136 19 0 chr17 72535924 72536137 -22736514 + Lx2 LINE L1 6770 6986 -11 6 1138 871 174 6 6 chr17 72536137 72536316 -22736335 + GA-rich Low_complexity Low_complexity 2 180 0 6 1138 387 0 0 0 chr17 72537558 72537601 -22735050 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 1138 211 297 138 39 chr17 72538187 72538390 -22734261 + MIRb SINE MIR 20 242 -26 6 1138 883 34 17 0 chr17 72538536 72538655 -22733996 + (TCTA)n Simple_repeat Simple_repeat 2 122 0 6 1138 730 61 0 0 chr17 72538674 72538772 -22733879 - B1_Mus2 SINE Alu -8 139 42 6 1138 249 188 69 59 chr17 72538714 72538816 -22733835 - RLTR25B LTR ERVK -529 499 397 6 1138 358 133 0 32 chr17 72538902 72538964 -22733687 - B1_Mur4 SINE Alu -90 60 1 7 1138 944 83 28 0 chr17 72538980 72539232 -22733419 + (TCTA)n Simple_repeat Simple_repeat 1 259 0 7 1138 540 278 125 14 chr17 72539233 72539441 -22733210 - B4A SINE B4 -59 233 3 7 1138 199 273 30 0 chr17 72539471 72539537 -22733114 - L2b LINE L2 -14 3361 3294 7 1138 474 18 0 0 chr17 72539733 72539788 -22732863 + (TG)n Simple_repeat Simple_repeat 1 55 0 7 1138 229 162 174 14 chr17 72539841 72539910 -22732741 - MIRb SINE MIR -23 245 166 7 1138 357 43 0 0 chr17 72540477 72540524 -22732127 + (GA)n Simple_repeat Simple_repeat 1 47 0 7 1138 881 111 0 6 chr17 72541855 72542019 -22730632 + (TAGA)n Simple_repeat Simple_repeat 2 164 0 7 1138 338 143 43 0 chr17 72542195 72542265 -22730386 + CT-rich Low_complexity Low_complexity 2 74 0 7 1138 180 0 0 0 chr17 72542555 72542575 -22730076 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 7 1138 38 0 0 0 chr17 72542958 72542996 -22729655 + AT_rich Low_complexity Low_complexity 1 38 0 8 1138 668 258 114 55 chr17 72543734 72543988 -22728663 + B4 SINE B4 24 292 0 8 1138 234 0 0 0 chr17 72544255 72544281 -22728370 + (CCA)n Simple_repeat Simple_repeat 3 28 0 8 1138 387 0 0 0 chr17 72545232 72545275 -22727376 + (TCC)n Simple_repeat Simple_repeat 1 43 0 8 1138 240 334 61 15 chr17 72547190 72547327 -22725324 + MIRc SINE MIR 86 231 -37 8 1138 405 0 0 0 chr17 72547533 72547578 -22725073 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 1138 229 342 9 35 chr17 72548031 72548146 -22724505 + MER5B DNA MER1_type 4 115 -63 8 1138 189 269 192 0 chr17 72548495 72548573 -22724078 - MIRc SINE MIR -57 211 119 8 1138 233 303 11 33 chr17 72551254 72551346 -22721305 - MIRb SINE MIR -83 185 96 8 1138 304 316 82 57 chr17 72551551 72551796 -22720855 + MIRb SINE MIR 18 268 0 8 1138 433 294 51 47 chr17 72552044 72552258 -22720393 + MER20 DNA MER1_type 5 219 0 9 1138 203 222 0 36 chr17 72553746 72553802 -22718849 + CT-rich Low_complexity Low_complexity 1 54 0 9 1138 933 260 54 19 chr17 72553802 72554061 -22718590 - Lx8 LINE L1 -153 7320 7053 9 1138 1938 168 45 6 chr17 72555576 72555930 -22716721 + ORR1C1 LTR MaLR 1 368 -10 9 1138 204 97 0 0 chr17 72555990 72556021 -22716630 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 1138 1052 218 5 14 chr17 72557464 72557673 -22714978 + B3 SINE B2 1 207 -9 9 1138 27 29 0 0 chr17 72557713 72557747 -22714904 + AT_rich Low_complexity Low_complexity 1 34 0 9 1138 212 185 0 18 chr17 72557772 72557827 -22714824 + GA-rich Low_complexity Low_complexity 4 57 0 9 1138 580 293 29 0 chr17 72557830 72558004 -22714647 - B3A SINE B2 -19 179 1 9 1138 1095 51 0 0 chr17 72558297 72558435 -22714216 + (TCC)n Simple_repeat Simple_repeat 1 138 0 9 1138 767 67 0 8 chr17 72559215 72559335 -22713316 + (TC)n Simple_repeat Simple_repeat 2 120 0 1 1138 819 209 38 33 chr17 72559922 72560135 -22712516 - B3 SINE B2 -2 214 1 1 1138 185 59 0 56 chr17 72560978 72561014 -22711637 + (GTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1138 1118 325 45 18 chr17 72561029 72561575 -22711076 - Lx8 LINE L1 -153 7320 6739 1 1138 280 325 0 0 chr17 72561587 72561667 -22710984 - ID4 SINE ID -2 81 2 1 1138 23 33 0 0 chr17 72561962 72561992 -22710659 + AT_rich Low_complexity Low_complexity 1 30 0 1 1138 214 261 0 0 chr17 72562128 72562174 -22710477 + (CACG)n Simple_repeat Simple_repeat 1 46 0 1 1138 180 0 0 0 chr17 72562496 72562516 -22710135 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1 1138 646 229 71 0 chr17 72563763 72563903 -22708748 - B1_Mur4 SINE Alu 0 150 1 1 1138 714 236 26 47 chr17 72566324 72566515 -22706136 - B3A SINE B2 -3 195 9 1 1138 975 284 67 15 chr17 72566595 72566924 -22705727 - MTE2b LTR MaLR -4 375 30 1 1138 718 140 58 7 chr17 72567241 72567378 -22705273 - URR1A DNA MER1_type -18 208 65 1 1138 396 149 0 0 chr17 72567738 72567832 -22704819 + (A)n Simple_repeat Simple_repeat 1 94 0 1 1138 364 263 25 19 chr17 72567972 72568188 -22704463 + (CA)n Simple_repeat Simple_repeat 1 217 0 1 1138 5006 188 92 8 chr17 72568491 72569549 -22703102 + Lx5 LINE L1 5901 7046 -4 1 1138 1741 190 167 3 chr17 72569579 72569938 -22702713 - MTC LTR MaLR -3 418 1 1 1138 377 226 172 9 chr17 72569945 72570001 -22702650 + MER53 DNA hAT 53 127 -66 1 1138 297 0 0 0 chr17 72570001 72570034 -22702617 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1138 377 226 172 9 chr17 72570034 72570093 -22702558 + MER53 DNA hAT 128 186 -7 1 1138 1061 290 75 27 chr17 72570420 72570958 -22701693 - L1MA5 LINE L1 -289 6008 5438 1 1138 448 187 11 11 chr17 72571300 72571392 -22701259 + MER112 DNA MER1_type 1 92 -169 1 1138 450 0 0 0 chr17 72571503 72571553 -22701098 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1138 366 277 165 49 chr17 72571856 72572080 -22700571 + B4A SINE B4 1 250 -42 1 1138 216 255 0 0 chr17 72572107 72572154 -22700497 + (CATG)n Simple_repeat Simple_repeat 3 49 0 1 1138 620 252 151 0 chr17 72572212 72572510 -22700141 + Charlie5 DNA MER1_type 2235 2577 -47 1 1138 189 359 28 75 chr17 72572721 72572935 -22699716 - MIR SINE MIR 0 262 59 1 1138 306 275 218 15 chr17 72573789 72573860 -22698791 + ID SINE ID 7 88 -136 1 1138 408 97 0 0 chr17 72573860 72573922 -22698729 + (TGG)n Simple_repeat Simple_repeat 3 64 0 1 1138 306 275 218 15 chr17 72573922 72573983 -22698668 + ID_B1 SINE B4 89 165 -59 1 1138 604 301 65 104 chr17 72574414 72574663 -22697988 + ORR1E LTR MaLR 2 240 -130 1 1138 562 242 369 14 chr17 72574653 72574950 -22697701 + MTD LTR MaLR 18 419 0 1 1138 521 240 8 8 chr17 72574951 72575077 -22697574 + ORR1D2 LTR MaLR 234 359 -11 1 1138 225 0 0 0 chr17 72575193 72575218 -22697433 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1138 568 179 0 29 chr17 72575224 72575362 -22697289 + (CATATA)n Simple_repeat Simple_repeat 2 135 0 1 1138 1104 256 99 25 chr17 72575421 72575826 -22696825 - L1MB4 LINE L1 -142 6038 5604 1 1138 401 203 76 0 chr17 72575824 72575942 -22696709 - L1MB4 LINE L1 -733 5447 5321 1 1138 353 277 133 85 chr17 72575946 72576257 -22696394 + MTEa LTR MaLR 8 379 0 1 1138 814 275 115 47 chr17 72576639 72577021 -22695630 + MLT1A1 LTR MaLR 1 408 0 1 1138 348 226 57 57 chr17 72577354 72577495 -22695156 - L1M LINE L1 -708 5416 5276 1 1138 465 266 109 106 chr17 72578955 72579211 -22693440 + B4 SINE B4 9 265 -27 1 1138 291 93 0 0 chr17 72579216 72579259 -22693392 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1138 516 32 0 0 chr17 72579259 72579320 -22693331 + (GA)n Simple_repeat Simple_repeat 2 63 0 1 1138 714 145 0 18 chr17 72579335 72579504 -22693147 + GA-rich Low_complexity Low_complexity 1 166 0 1 1138 624 14 0 0 chr17 72579836 72579909 -22692742 + (CA)n Simple_repeat Simple_repeat 1 73 0 1 1138 379 297 58 22 chr17 72579921 72580198 -22692453 + LTR48 LTR ERV1 380 613 -31 1 1138 243 259 47 58 chr17 72583540 72583626 -22689025 + MER33 DNA MER1_type 6 90 -234 1 1138 344 287 158 11 chr17 72583836 72584026 -22688625 + L1MB8 LINE L1 5834 6051 -127 1 1138 21 0 0 0 chr17 72584028 72584049 -22688602 + AT_rich Low_complexity Low_complexity 1 21 0 1 1138 344 225 66 36 chr17 72584154 72584320 -22688331 + MER33 DNA MER1_type 150 320 -4 1 1138 2396 90 19 0 chr17 72584741 72585062 -22687589 + ORR1A2 LTR MaLR 1 327 0 1 1138 266 271 24 0 chr17 72585220 72585305 -22687346 - MER5B DNA MER1_type -46 132 46 1 1138 313 351 100 20 chr17 72585610 72585959 -22686692 - L3 LINE CR1 -230 4259 3883 1 1138 1137 274 88 18 chr17 72586286 72586673 -22685978 + MTD LTR MaLR 6 419 0 1 1138 195 42 0 0 chr17 72587343 72587367 -22685284 + (GGA)n Simple_repeat Simple_repeat 1 24 0 1 1138 445 208 114 24 chr17 72589255 72589378 -22683273 - MTEb LTR MaLR 0 379 246 1 1138 365 258 137 37 chr17 72589409 72589570 -22683081 - MTEb LTR MaLR -201 178 2 1 1138 393 243 117 0 chr17 72590687 72590790 -22681861 + PB1 SINE Alu 11 125 -2 1 1138 250 214 71 0 chr17 72591772 72591842 -22680809 + L2b LINE L2 3276 3350 -25 1 1138 244 198 37 50 chr17 72593532 72593622 -22679029 + MIRc SINE MIR 62 150 -126 1 1138 210 246 54 14 chr17 72593735 72593809 -22678842 + GA-rich Low_complexity Low_complexity 2 78 0 1 1138 277 172 136 17 chr17 72594039 72594098 -22678553 + ID4_ SINE ID 16 81 -2 1 1138 23 0 0 0 chr17 72594906 72594929 -22677722 + AT_rich Low_complexity Low_complexity 1 23 0 1 1138 458 96 14 0 chr17 72595424 72595497 -22677154 + (TTCC)n Simple_repeat Simple_repeat 4 77 0 1 1138 486 0 0 0 chr17 72595499 72595553 -22677098 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 1138 343 304 69 21 chr17 72595570 72595736 -22676915 + MER58B DNA MER1_type 152 324 -17 1 1138 230 254 0 17 chr17 72597199 72597259 -22675392 + B4 SINE B4 19 77 -215 1 1138 1997 194 38 10 chr17 72597262 72597662 -22674989 - MTC LTR MaLR -1 420 10 1 1138 5855 118 25 0 chr17 72597674 72598514 -22674137 + Lx4A LINE L1 6157 7017 -41 1 1138 370 295 62 31 chr17 72598540 72598701 -22673950 + B4 SINE B4 109 274 -18 1 1138 1054 93 12 0 chr17 72602457 72602618 -22670033 + (TTTC)n Simple_repeat Simple_repeat 2 164 0 1 1138 197 83 28 0 chr17 72603858 72603894 -22668757 + (GA)n Simple_repeat Simple_repeat 1 37 0 1 1138 423 0 0 0 chr17 72604023 72604070 -22668581 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 1138 271 227 20 30 chr17 72604879 72604979 -22667672 + (CAGAGA)n Simple_repeat Simple_repeat 3 101 0 1 1138 584 187 8 0 chr17 72605129 72605252 -22667399 + (TA)n Simple_repeat Simple_repeat 2 125 0 1 1138 809 248 52 8 chr17 72605267 72605515 -22667136 - MTE2b LTR MaLR -119 260 2 1 1138 213 154 0 0 chr17 72607548 72607587 -22665064 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1138 760 304 29 0 chr17 72607593 72607797 -22664854 - B4 SINE B4 0 292 83 1 1138 576 205 94 0 chr17 72608867 72608994 -22663657 + B1F2 SINE Alu 3 141 -8 1 1138 297 235 23 23 chr17 72608998 72609085 -22663566 + GA-rich Low_complexity Low_complexity 2 88 0 1 1138 425 19 19 0 chr17 72609089 72609143 -22663508 + (GA)n Simple_repeat Simple_repeat 1 55 0 1 1138 223 304 0 48 chr17 72609233 72609316 -22663335 - ID4_ SINE ID -2 81 3 1 1138 24 0 0 0 chr17 72610085 72610109 -22662542 + AT_rich Low_complexity Low_complexity 1 24 0 1 1138 765 261 6 12 chr17 72610142 72610305 -22662346 + RSINE1 SINE B4 4 165 0 1 1138 753 293 33 0 chr17 72610359 72610574 -22662077 - ID_B1 SINE B4 0 224 3 1 1138 237 35 0 0 chr17 72610779 72610808 -22661843 - L1Md_F2 LINE L1 -645 5921 5893 1 1138 5181 55 17 3 chr17 72610808 72611461 -22661190 + L1Md_F2 LINE L1 5920 6581 -1 1 1138 27 29 0 0 chr17 72611480 72611514 -22661137 + AT_rich Low_complexity Low_complexity 1 34 0 1 1138 599 286 28 28 chr17 72611537 72611717 -22660934 - B3A SINE B2 -18 180 1 1 1138 228 64 20 41 chr17 72612727 72612776 -22659875 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 1 1138 201 121 0 0 chr17 72613364 72613397 -22659254 + (TCC)n Simple_repeat Simple_repeat 2 34 0 1 142 423 294 89 117 chr17 72613492 72614017 -22658634 - RMER13A LTR ERVK -42 585 30 1 1139 197 65 32 0 chr17 72614069 72614100 -22658551 + (TCC)n Simple_repeat Simple_repeat 2 33 0 1 1139 207 0 0 0 chr17 72614191 72614214 -22658437 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 1 1139 988 266 36 0 chr17 72614823 72615097 -22657554 - MER58B DNA MER1_type 0 341 58 1 1139 865 292 81 57 chr17 72616227 72616685 -22655966 + MER31A LTR ERV1 6 474 -11 1 1139 204 206 28 56 chr17 72617177 72617249 -22655402 + GA-rich Low_complexity Low_complexity 2 71 0 1 1139 240 35 0 0 chr17 72617249 72617278 -22655373 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1139 458 315 50 0 chr17 72618555 72618736 -22653915 + MER63B DNA AcHobo 231 420 -16 1 1139 742 235 54 15 chr17 72619861 72620064 -22652587 - B3 SINE B2 -2 214 4 1 1139 257 75 0 24 chr17 72620143 72620184 -22652467 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1139 486 138 18 9 chr17 72620325 72620435 -22652216 + (CA)n Simple_repeat Simple_repeat 2 112 0 1 1139 328 154 19 28 chr17 72620499 72620606 -22652045 + (CA)n Simple_repeat Simple_repeat 1 106 0 1 1139 519 125 35 35 chr17 72620648 72620822 -22651829 + (CA)n Simple_repeat Simple_repeat 1 174 0 1 1139 246 32 0 0 chr17 72620827 72620858 -22651793 + (GA)n Simple_repeat Simple_repeat 1 31 0 1 1139 486 0 0 0 chr17 72621504 72621558 -22651093 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 1139 216 0 0 0 chr17 72621558 72621581 -22651070 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1139 360 0 0 0 chr17 72621748 72621788 -22650863 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1139 287 112 310 26 chr17 72622785 72622901 -22649750 - B2_Mm2 SINE B2 0 195 47 1 1139 1171 93 35 6 chr17 72622933 72623106 -22649545 - B2_Mm1t SINE B2 -14 179 2 2 1139 28 0 0 0 chr17 72623378 72623406 -22649245 + AT_rich Low_complexity Low_complexity 1 28 0 2 1139 21 36 0 0 chr17 72624002 72624030 -22648621 + AT_rich Low_complexity Low_complexity 1 28 0 2 1139 25 65 0 0 chr17 72624332 72624378 -22648273 + AT_rich Low_complexity Low_complexity 1 46 0 2 1139 2978 235 61 75 chr17 72625507 72626489 -22646162 - RCHARR1 DNA MER1_type -4 970 3 2 1139 331 321 44 75 chr17 72626616 72626842 -22645809 + RLTR42-int LTR ERVK 1149 1367 -4155 2 1139 207 0 0 0 chr17 72626850 72626873 -22645778 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 2 1139 1596 222 95 0 chr17 72627376 72627754 -22644897 + MTD LTR MaLR 6 419 0 2 1139 769 238 24 0 chr17 72627754 72627918 -22644733 + B3 SINE B2 38 205 -11 2 1139 1575 171 33 54 chr17 72629126 72629460 -22643191 + ORR1A4 LTR MaLR 1 327 -2 2 1139 2747 148 2 7 chr17 72629539 72629961 -22642690 - MTC LTR MaLR 0 421 2 2 1139 624 253 55 37 chr17 72630140 72630187 -22642464 + Lx7 LINE L1 6490 6536 -1160 2 1139 3534 15 5 0 chr17 72630187 72630581 -22642070 + MTA_Mm LTR MaLR 1 396 0 2 1139 624 253 55 37 chr17 72630581 72630697 -22641954 + Lx7 LINE L1 6537 6656 -1040 2 1139 2308 217 70 38 chr17 72630684 72631323 -22641328 + Lx7 LINE L1 7022 7695 -1 2 1139 193 113 36 36 chr17 72631767 72631822 -22640829 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 2 1139 369 0 0 0 chr17 72631829 72631870 -22640781 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1139 306 0 0 0 chr17 72631870 72631903 -22640748 + (GA)n Simple_repeat Simple_repeat 2 35 0 2 1139 396 0 0 0 chr17 72633576 72633620 -22639031 + (TTA)n Simple_repeat Simple_repeat 1 44 0 2 1139 341 247 29 58 chr17 72633820 72633923 -22638728 + PB1D10 SINE Alu 17 116 -1 2 1139 351 318 23 15 chr17 72633953 72634084 -22638567 + B1F1 SINE Alu 1 132 -17 2 1139 715 290 65 23 chr17 72634759 72635020 -22637631 + MER58B DNA MER1_type 1 272 -69 2 1139 236 339 18 9 chr17 72635786 72635899 -22636752 + MLT1A LTR MaLR 1 114 -260 2 1139 377 292 97 0 chr17 72635947 72636091 -22636560 + MLT1A LTR MaLR 197 354 -20 2 1139 384 97 0 0 chr17 72636448 72636510 -22636141 + (GA)n Simple_repeat Simple_repeat 2 63 0 2 1139 201 39 0 0 chr17 72637374 72637400 -22635251 + (A)n Simple_repeat Simple_repeat 1 26 0 2 1139 487 336 72 28 chr17 72637418 72637846 -22634805 + L2 LINE L2 1825 2271 -1148 2 1139 306 320 41 0 chr17 72638318 72638415 -22634236 - PB1D10 SINE Alu -6 111 11 2 1139 197 298 45 55 chr17 72638838 72638948 -22633703 - L3 LINE CR1 -2 4487 4379 2 1139 469 245 0 0 chr17 72640387 72640485 -22632166 + PB1D10 SINE Alu 9 106 -11 2 1139 804 229 198 14 chr17 72640788 72641071 -22631580 + ORR1D2 LTR MaLR 29 363 -7 2 1139 21 0 0 0 chr17 72642103 72642124 -22630527 + AT_rich Low_complexity Low_complexity 1 21 0 2 1139 468 301 103 31 chr17 72643397 72643688 -22628963 + MER31B LTR ERV1 1 312 -154 2 1139 242 29 0 28 chr17 72645059 72645095 -22627556 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 2 1139 450 0 0 0 chr17 72645827 72645877 -22626774 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1139 1044 263 15 7 chr17 72646281 72646553 -22626098 + B4 SINE B4 1 274 -18 2 1139 414 154 0 0 chr17 72646588 72646666 -22625985 + (TG)n Simple_repeat Simple_repeat 2 79 0 2 1139 486 108 0 0 chr17 72648147 72648230 -22624421 + (CCAA)n Simple_repeat Simple_repeat 2 84 0 2 1139 436 283 207 39 chr17 72648279 72648511 -22624140 + B4 SINE B4 18 288 -4 2 1139 695 191 6 0 chr17 72648534 72648696 -22623955 + (CA)n Simple_repeat Simple_repeat 2 164 0 2 1139 257 243 14 28 chr17 72648699 72648771 -22623880 + (CATA)n Simple_repeat Simple_repeat 2 72 0 2 1139 1437 217 129 11 chr17 72648881 72649254 -22623397 - MTD LTR MaLR -2 417 1 2 1139 243 0 0 0 chr17 72649632 72649659 -22622992 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 2 1139 469 284 35 74 chr17 72650111 72650143 -22622508 - B3A SINE B2 -4 194 171 2 1139 324 64 0 0 chr17 72650143 72650190 -22622461 + (TCTG)n Simple_repeat Simple_repeat 4 50 0 2 1139 469 284 35 74 chr17 72650190 72650359 -22622292 - B3A SINE B2 -28 170 1 2 1139 219 217 200 0 chr17 72650403 72650463 -22622188 - PB1 SINE Alu -35 92 21 2 1139 460 273 14 14 chr17 72650475 72650620 -22622031 - MIR SINE MIR -71 191 47 2 1139 596 315 21 45 chr17 72651672 72651915 -22620736 + RMER15 LTR ERVL 324 560 -15 2 1139 2715 150 21 17 chr17 72652574 72653090 -22619561 + RLTR28 LTR ERVL 7 524 0 2 1139 636 288 31 54 chr17 72653103 72653327 -22619324 + ID_B1 SINE B4 2 220 -4 2 1139 212 319 21 31 chr17 72653608 72653705 -22618946 - MIRb SINE MIR -46 222 127 2 1139 282 322 34 11 chr17 72654089 72654177 -22618474 + MLT1A LTR MaLR 6 95 -279 2 1139 270 21 42 21 chr17 72654187 72654235 -22618416 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 2 1139 1172 36 7 0 chr17 72654240 72654378 -22618273 - B1_Mm SINE Alu -7 140 2 2 1139 226 266 16 0 chr17 72655210 72655274 -22617377 + C-rich Low_complexity Low_complexity 1 65 0 2 1139 25 0 0 0 chr17 72656493 72656518 -22616133 + AT_rich Low_complexity Low_complexity 1 25 0 2 1139 423 0 0 0 chr17 72656766 72656813 -22615838 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1139 544 275 0 7 chr17 72656815 72656954 -22615697 - RSINE1 SINE B4 -25 140 3 2 1139 359 286 79 74 chr17 72657076 72657265 -22615386 - ORR1E LTR MaLR -168 191 2 2 1139 234 297 10 29 chr17 72657957 72658061 -22614590 - MIRb SINE MIR -30 238 137 2 1139 306 0 0 0 chr17 72658614 72658648 -22614003 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1139 352 232 29 39 chr17 72660082 72660185 -22612466 + MLT1A LTR MaLR 1 102 -272 2 1139 1055 318 95 27 chr17 72660276 72660952 -22611699 + L1MD1 LINE L1 5506 6227 -15 2 1139 1327 218 66 50 chr17 72661328 72661690 -22610961 + ORR1D2 LTR MaLR 3 370 0 2 1139 312 293 128 0 chr17 72661998 72662131 -22610520 + MIRb SINE MIR 44 193 -75 2 1139 190 288 91 0 chr17 72662972 72663038 -22609613 - L4 LINE RTE -338 1691 1620 2 1139 194 271 50 17 chr17 72663553 72663613 -22609038 - L2c LINE L2 -209 3178 3117 2 1139 656 54 0 11 chr17 72663613 72663707 -22608944 + (GGA)n Simple_repeat Simple_repeat 1 93 0 2 1139 339 85 0 0 chr17 72664097 72664144 -22608507 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 2 1139 881 249 5 62 chr17 72664724 72664934 -22607717 + B3A SINE B2 1 198 0 2 1139 240 250 31 15 chr17 72665576 72665641 -22607010 - ID4 SINE ID -13 70 5 2 1139 279 0 0 0 chr17 72665910 72665941 -22606710 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1139 368 75 0 43 chr17 72666085 72666155 -22606496 + (A)n Simple_repeat Simple_repeat 1 67 0 2 1139 882 254 106 67 chr17 72666189 72666547 -22606104 - MTEa LTR MaLR -3 376 5 2 1139 2769 50 24 0 chr17 72666987 72667264 -22605387 + ORR1A1 LTR MaLR 1 278 -68 2 1139 225 0 0 0 chr17 72667264 72667289 -22605362 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 1139 2769 50 24 0 chr17 72667289 72667349 -22605302 + ORR1A1 LTR MaLR 279 344 -2 2 1139 802 36 27 0 chr17 72667658 72667768 -22604883 + B1_Mm SINE Alu 35 147 0 2 1139 692 108 59 7 chr17 72669314 72669585 -22603066 + CT-rich Low_complexity Low_complexity 1 285 0 2 1139 472 346 119 39 chr17 72669939 72670963 -22601688 + L2a LINE L2 2115 3221 -205 2 1139 1347 87 0 0 chr17 72671121 72671376 -22601275 + (TGGA)n Simple_repeat Simple_repeat 1 255 0 2 1139 249 0 73 0 chr17 72671534 72671575 -22601076 + (TTG)n Simple_repeat Simple_repeat 2 45 0 2 1139 246 128 0 0 chr17 72671898 72671937 -22600714 + (TCC)n Simple_repeat Simple_repeat 2 40 0 2 1139 660 266 52 11 chr17 72672185 72672433 -22600218 - L1MA4 LINE L1 -215 5959 5703 2 1139 21 0 0 0 chr17 72672830 72672851 -22599800 + AT_rich Low_complexity Low_complexity 1 21 0 2 1139 788 289 150 6 chr17 72673034 72673354 -22599297 - Lx7 LINE L1 -423 7273 6908 2 1139 289 296 139 17 chr17 72673505 72673677 -22598974 - L1MB3 LINE L1 -36 6147 5955 2 1139 228 291 95 22 chr17 72673719 72673856 -22598795 - HAL1 LINE L1 -967 1540 1394 2 1139 21 0 0 0 chr17 72673874 72673895 -22598756 + AT_rich Low_complexity Low_complexity 1 21 0 2 1139 193 57 57 0 chr17 72674714 72674749 -22597902 + (GGAGA)n Simple_repeat Simple_repeat 4 40 0 2 1139 1343 212 85 34 chr17 72675758 72676110 -22596541 - ORR1D2 LTR MaLR 0 370 1 2 1139 519 319 190 12 chr17 72676745 72677072 -22595579 - Tigger13a DNA MER2_type -386 385 1 2 1139 252 315 111 7 chr17 72677870 72678014 -22594637 - MIRc SINE MIR -26 242 84 2 1139 233 269 26 0 chr17 72679479 72679557 -22593094 + (TA)n Simple_repeat Simple_repeat 2 81 0 2 1139 3836 260 104 39 chr17 72679561 72680855 -22591796 + Lx9 LINE L1 6251 7628 -16 2 1139 297 0 0 0 chr17 72681092 72681125 -22591526 + (TC)n Simple_repeat Simple_repeat 2 34 0 2 1139 252 0 0 0 chr17 72681125 72681152 -22591499 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1139 333 0 0 0 chr17 72681152 72681188 -22591463 + (GA)n Simple_repeat Simple_repeat 1 37 0 2 1139 249 108 0 0 chr17 72681564 72681601 -22591050 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 1139 715 296 67 19 chr17 72681636 72681905 -22590746 - B4A SINE B4 -8 284 3 2 1139 445 278 30 15 chr17 72684489 72684624 -22588027 + ORR1E LTR MaLR 1 137 -222 2 1139 562 263 84 19 chr17 72686088 72686243 -22586408 + B4A SINE B4 118 282 -10 2 1139 588 87 0 0 chr17 72686244 72686336 -22586315 + (CA)n Simple_repeat Simple_repeat 2 93 0 2 1139 573 100 0 0 chr17 72686402 72686492 -22586159 + (TC)n Simple_repeat Simple_repeat 1 90 0 2 1139 204 286 16 16 chr17 72687032 72687096 -22585555 - MIR SINE MIR -170 92 29 3 1139 279 239 0 0 chr17 72687705 72687793 -22584858 + (CATA)n Simple_repeat Simple_repeat 1 88 0 3 1139 718 293 44 79 chr17 72687926 72688293 -22584358 - ORR1E LTR MaLR -2 357 4 3 1139 389 322 146 0 chr17 72691080 72691313 -22581338 - L3 LINE CR1 -1114 3375 3109 3 1139 510 17 0 0 chr17 72691772 72691831 -22580820 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 1139 459 272 18 0 chr17 72692392 72692506 -22580145 - B4A SINE B4 -172 120 5 3 1139 205 375 57 0 chr17 72692838 72692926 -22579725 + L2b LINE L2 3139 3231 -144 3 1139 1144 277 81 14 chr17 72693146 72693655 -22578996 - L1M4b LINE L1 -820 6186 5644 3 1139 654 95 0 0 chr17 72693668 72693763 -22578888 + (TATG)n Simple_repeat Simple_repeat 2 96 0 3 1139 250 278 11 11 chr17 72693769 72693860 -22578791 + (TA)n Simple_repeat Simple_repeat 1 91 0 3 1139 254 313 99 13 chr17 72693876 72694028 -22578623 - L1M4b LINE L1 -1430 5576 5412 3 1139 248 290 86 25 chr17 72694304 72694502 -22578149 - L1M4b LINE L1 -5804 1530 1321 3 1139 861 295 44 25 chr17 72696883 72697158 -22575493 - B4A SINE B4 -4 288 9 3 1139 343 229 24 0 chr17 72698873 72698956 -22573695 + B4 SINE B4 1 85 -207 3 1139 437 302 7 20 chr17 72698994 72699146 -22573505 + B4 SINE B4 65 214 -78 3 1139 200 35 35 0 chr17 72699146 72699175 -22573476 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 3 1139 437 328 32 21 chr17 72699175 72699228 -22573423 + B4 SINE B4 214 271 -21 3 1139 414 39 0 0 chr17 72699231 72699283 -22573368 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 1139 285 296 84 46 chr17 72699400 72699531 -22573120 + ORR1E LTR MaLR 1 136 -223 3 1139 954 253 72 17 chr17 72699567 72699877 -22572774 - ORR1D2 LTR MaLR -2 368 1 3 1139 371 65 32 0 chr17 72700351 72700413 -22572238 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 3 1139 2015 142 20 8 chr17 72700899 72701254 -22571397 - ORR1B2 LTR MaLR -8 359 1 3 1139 405 136 0 0 chr17 72701583 72701649 -22571002 + (TCC)n Simple_repeat Simple_repeat 3 68 0 3 1139 678 274 24 6 chr17 72701649 72701814 -22570837 - B3A SINE B2 -30 168 1 3 1139 579 290 92 56 chr17 72703389 72703802 -22568849 + RLTR23 LTR ERV1 3 430 0 3 1139 3657 38 12 79 chr17 72703986 72704495 -22568156 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1139 180 0 0 0 chr17 72705226 72705246 -22567405 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1139 1008 196 10 0 chr17 72705274 72705483 -22567168 + MT2A LTR ERVL 3 213 -320 3 1139 341 93 0 18 chr17 72705484 72705539 -22567112 + (TTTC)n Simple_repeat Simple_repeat 1 54 0 3 1139 790 187 258 18 chr17 72705545 72705774 -22566877 + MT2A LTR ERVL 179 462 -71 3 1139 717 139 0 0 chr17 72705776 72705898 -22566753 + (TC)n Simple_repeat Simple_repeat 1 122 0 3 1139 265 103 0 0 chr17 72705906 72705945 -22566706 + MT2A LTR ERVL 493 531 -2 3 1139 2098 199 42 8 chr17 72706628 72707029 -22565622 - MTD LTR MaLR 0 419 5 3 1139 743 229 0 20 chr17 72707370 72707517 -22565134 + B3A SINE B2 8 151 -47 3 1139 411 73 0 0 chr17 72707519 72707574 -22565077 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1139 544 356 47 21 chr17 72707700 72708122 -22564529 + L1ME3B LINE L1 5419 5851 -389 3 1139 326 289 162 6 chr17 72709435 72709602 -22563049 + MER53 DNA hAT 1 193 0 3 1139 323 316 60 8 chr17 72711149 72711283 -22561368 + MIR3 SINE MIR 62 202 -6 3 1139 585 110 0 0 chr17 72711915 72712006 -22560645 + (TC)n Simple_repeat Simple_repeat 2 92 0 3 1139 620 289 29 10 chr17 72712007 72712213 -22560438 - ID_B1 SINE B4 -14 210 1 3 1139 324 266 42 42 chr17 72713186 72713304 -22559347 - MIRb SINE MIR -32 236 119 3 1139 875 271 37 38 chr17 72713456 72713803 -22558848 + MTEb LTR MaLR 1 340 -39 3 1139 213 39 0 0 chr17 72714360 72714386 -22558265 + (TCC)n Simple_repeat Simple_repeat 3 28 0 3 1139 1125 96 0 0 chr17 72714392 72714538 -22558113 - B1_Mus2 SINE Alu -1 146 1 3 1139 879 100 0 0 chr17 72714607 72714757 -22557894 + (TC)n Simple_repeat Simple_repeat 2 151 0 3 1139 405 0 0 0 chr17 72714757 72714801 -22557850 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1139 209 333 12 0 chr17 72716400 72716484 -22556167 - MIR SINE MIR -73 135 51 3 1139 185 269 19 0 chr17 72716898 72716950 -22555701 + MIRc SINE MIR 88 140 -128 3 1139 498 33 0 0 chr17 72717054 72717114 -22555537 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 1139 378 332 129 31 chr17 72717170 72717425 -22555226 - B4A SINE B4 -7 285 6 3 1139 23 0 0 0 chr17 72718895 72718918 -22553733 + AT_rich Low_complexity Low_complexity 1 23 0 3 1139 236 288 59 33 chr17 72718929 72719056 -22553595 - MIRm SINE MIR -43 165 50 3 1139 244 293 190 0 chr17 72719994 72720168 -22552483 - Lx9 LINE L1 -45 7599 7393 3 1139 209 182 0 43 chr17 72720240 72720286 -22552365 + GA-rich Low_complexity Low_complexity 1 44 0 3 1139 1959 164 68 0 chr17 72721437 72721791 -22550860 - ORR1C2 LTR MaLR -2 382 5 3 1139 684 319 86 25 chr17 72723493 72723678 -22548973 - MLT1C LTR MaLR 0 467 267 3 1139 2911 193 106 28 chr17 72723678 72724360 -22548291 + RMER19A LTR ERVK 1 735 -2 3 1139 684 319 86 25 chr17 72724360 72724614 -22548037 - MLT1C LTR MaLR -201 266 1 3 1139 879 219 72 10 chr17 72725073 72725267 -22547384 - B3 SINE B2 -9 207 2 3 1139 403 296 228 13 chr17 72725828 72726061 -22546590 + B4 SINE B4 1 283 -9 3 1139 231 217 0 0 chr17 72726067 72726113 -22546538 + (CATATA)n Simple_repeat Simple_repeat 6 51 0 3 1139 181 232 53 18 chr17 72727695 72727752 -22544899 - MIRc SINE MIR -125 143 85 3 1139 360 242 27 12 chr17 72731142 72731244 -22541407 + PB1D10 SINE Alu 14 116 -1 3 1139 316 266 0 37 chr17 72731257 72731339 -22541312 + B4 SINE B4 3 81 -211 3 1139 363 221 0 0 chr17 72731342 72731428 -22541223 + (TA)n Simple_repeat Simple_repeat 2 87 0 3 1139 276 77 0 0 chr17 72731441 72731480 -22541171 + (GTTTG)n Simple_repeat Simple_repeat 1 39 0 3 1139 611 240 7 20 chr17 72731497 72731646 -22541005 - B1_Mur1 SINE Alu -1 148 2 3 1139 419 288 188 7 chr17 72731648 72731802 -22540849 + B4 SINE B4 97 278 -14 3 1139 330 283 121 53 chr17 72731902 72732092 -22540559 - MIRb SINE MIR -32 236 34 3 1139 415 295 43 60 chr17 72732436 72732735 -22539916 + CR1_Mam LINE CR1 1570 1863 -341 3 1139 1133 191 0 43 chr17 72732778 72733013 -22539638 + URR1B DNA MER1_type 1 225 0 3 1139 2413 157 114 39 chr17 72733401 72733892 -22538759 - RLTR24 LTR ERV1 0 529 2 3 1139 308 286 149 66 chr17 72734373 72734601 -22538050 + L2a LINE L2 1269 1515 -1904 3 1139 209 98 18 73 chr17 72735373 72735428 -22537223 + T-rich Low_complexity Low_complexity 2 53 0 3 1139 449 293 130 52 chr17 72735583 72735929 -22536722 + L2a LINE L2 2260 2632 -787 3 1139 274 354 87 21 chr17 72736080 72736322 -22536329 + L2a LINE L2 2910 3167 -259 3 1139 450 0 0 0 chr17 72736397 72736447 -22536204 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1139 255 263 0 34 chr17 72736478 72736537 -22536114 + L2a LINE L2 3330 3386 -1 3 1139 265 277 141 16 chr17 72736787 72736908 -22535743 - B4A SINE B4 -6 286 151 3 1139 1070 204 46 132 chr17 72738544 72738882 -22533769 + ORR1D1 LTR MaLR 2 311 -63 3 1139 1224 85 57 6 chr17 72738882 72739059 -22533592 + B2_Mm2 SINE B2 1 186 -9 3 1139 1070 204 46 132 chr17 72739059 72739115 -22533536 + ORR1D1 LTR MaLR 312 362 -12 3 1139 1008 86 0 0 chr17 72739618 72739758 -22532893 + (TTCC)n Simple_repeat Simple_repeat 1 140 0 3 1139 188 323 102 20 chr17 72740809 72740907 -22531744 - MIRb SINE MIR -69 199 94 3 1139 754 253 204 29 chr17 72740914 72741068 -22531583 - MTEa LTR MaLR -9 370 199 3 1139 621 0 0 0 chr17 72741068 72741137 -22531514 + (GA)n Simple_repeat Simple_repeat 2 70 0 3 1139 754 253 204 29 chr17 72741137 72741295 -22531356 - MTEa LTR MaLR -181 198 3 3 1139 1796 53 4 0 chr17 72741357 72741583 -22531068 - L1_Mus1 LINE L1 0 6567 6341 3 1139 249 353 37 8 chr17 72742146 72742280 -22530371 + MIRc SINE MIR 85 222 -46 3 1139 255 337 20 10 chr17 72742534 72742633 -22530018 - MIR3 SINE MIR -23 185 86 3 1139 242 27 81 0 chr17 72742784 72742821 -22529830 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 3 1139 228 35 0 0 chr17 72742892 72742921 -22529730 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1139 441 0 0 0 chr17 72742921 72742969 -22529682 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 1139 1098 285 58 11 chr17 72743253 72743615 -22529036 - MTE2b LTR MaLR 0 379 1 3 1139 1383 232 34 11 chr17 72743827 72744206 -22528445 + RLTR20B3 LTR ERVK 75 462 -115 3 1139 360 0 0 0 chr17 72744216 72744256 -22528395 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1140 219 139 0 0 chr17 72745639 72745675 -22526976 + (GAA)n Simple_repeat Simple_repeat 1 36 0 3 1140 259 383 50 43 chr17 72746436 72746597 -22526054 + Charlie17a DNA MER1_type 38 199 -20 3 1140 1429 163 26 15 chr17 72746749 72747017 -22525634 + ORR1B2 LTR MaLR 97 367 0 3 1140 234 333 21 0 chr17 72747611 72747707 -22524944 - Tigger12 DNA MER2_type -6 1953 1856 3 1140 493 288 30 18 chr17 72747739 72747905 -22524746 - Tigger12 DNA MER2_type -1791 168 1 3 1140 553 298 7 0 chr17 72748268 72748419 -22524232 + MLT1A0 LTR MaLR 211 362 -3 3 1140 306 287 29 29 chr17 72748783 72748887 -22523764 + MIRb SINE MIR 34 137 -131 3 1140 24 53 0 0 chr17 72749951 72749989 -22522662 + AT_rich Low_complexity Low_complexity 1 38 0 3 1140 212 350 53 35 chr17 72750563 72750732 -22521919 - MIRb SINE MIR 0 268 97 3 1140 569 248 199 11 chr17 72750825 72751106 -22521545 + L1ME4a LINE L1 5789 6122 -2 3 1140 444 319 115 11 chr17 72753769 72754029 -22518622 - Lx8 LINE L1 -179 7294 7008 3 1140 180 111 0 0 chr17 72754197 72754224 -22518427 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1140 641 299 50 50 chr17 72754234 72754516 -22518135 + B4 SINE B4 7 288 -4 3 1140 612 107 0 0 chr17 72754531 72754634 -22518017 + (CA)n Simple_repeat Simple_repeat 2 104 0 3 1140 181 152 0 29 chr17 72755166 72755200 -22517451 - L2c LINE L2 -3 3384 3352 3 1140 209 286 0 25 chr17 72755507 72755586 -22517065 + (CAGA)n Simple_repeat Simple_repeat 2 78 0 3 1140 782 311 85 92 chr17 72755796 72756348 -22516303 + L1MC1 LINE L1 5780 6327 -6 3 1140 760 309 86 16 chr17 72759353 72759785 -22512866 - MLT1G1 LTR MaLR -66 513 13 3 1140 228 274 0 0 chr17 72760702 72760764 -22511887 - MIR SINE MIR -77 185 124 3 1140 784 266 176 23 chr17 72760813 72761153 -22511498 + MTD LTR MaLR 13 404 -15 4 1140 929 152 217 0 chr17 72762003 72762187 -22510464 - URR1A DNA MER1_type 0 226 3 4 1140 399 235 75 68 chr17 72762557 72762703 -22509948 + ID_B1 SINE B4 76 222 -2 4 1140 303 104 0 0 chr17 72763628 72763676 -22508975 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 1140 971 300 36 4 chr17 72763677 72763955 -22508696 - B4A SINE B4 -2 290 4 4 1140 468 223 31 47 chr17 72764252 72764379 -22508272 - MER5A1 DNA MER1_type 0 166 42 4 1140 301 267 0 43 chr17 72765587 72765681 -22506970 + RLTR14-int LTR ERV1 5228 5317 0 4 1140 310 279 38 108 chr17 72765962 72766119 -22506532 + RLTR14 LTR ERV1 224 369 -13 4 1140 1283 235 56 16 chr17 72766825 72767128 -22505523 - MTD LTR MaLR -104 315 1 4 1140 2677 164 36 21 chr17 72767743 72768180 -22504471 + RLTR20C LTR ERVK 1 432 -102 4 1140 522 0 0 0 chr17 72768180 72768238 -22504413 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 1140 2677 164 36 21 chr17 72768238 72768324 -22504327 + RLTR20C LTR ERVK 433 531 -3 4 1140 288 288 102 89 chr17 72768487 72768880 -22503771 - RMER10A LTR ERVL -27 415 18 4 1140 180 0 0 0 chr17 72769185 72769205 -22503446 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 1140 435 38 0 0 chr17 72772487 72772540 -22500111 + (TTCA)n Simple_repeat Simple_repeat 4 56 0 4 1140 831 93 0 0 chr17 72773450 72773568 -22499083 + (TC)n Simple_repeat Simple_repeat 1 118 0 4 1140 1062 144 0 0 chr17 72774050 72774230 -22498421 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1140 973 101 28 20 chr17 72774230 72774584 -22498067 + (TATG)n Simple_repeat Simple_repeat 1 356 0 4 1140 547 130 20 0 chr17 72774818 72774918 -22497733 + (TC)n Simple_repeat Simple_repeat 1 102 0 4 1140 180 0 0 0 chr17 72775295 72775315 -22497336 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 1140 450 0 0 0 chr17 72775776 72775826 -22496825 + (CTA)n Simple_repeat Simple_repeat 1 50 0 4 1140 270 0 0 0 chr17 72775833 72775863 -22496788 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1140 289 356 71 36 chr17 72775884 72776108 -22496543 + MIR SINE MIR 31 262 0 4 1140 1232 269 66 13 chr17 72776242 72776638 -22496013 - MTD LTR MaLR 0 419 3 4 1140 525 32 0 0 chr17 72776849 72776912 -22495739 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1140 1513 130 72 143 chr17 72776913 72777018 -22495633 - ORR1B1 LTR MaLR -4 390 336 4 1140 1176 127 38 16 chr17 72777018 72777202 -22495449 - B2_Mm2 SINE B2 -6 189 2 4 1140 1513 130 72 143 chr17 72777202 72777473 -22495178 - ORR1B1 LTR MaLR -59 335 41 4 1140 468 0 0 0 chr17 72777480 72777532 -22495119 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1140 379 225 24 112 chr17 72777634 72777759 -22494892 - B4 SINE B4 -134 158 45 4 1140 184 380 64 9 chr17 72779663 72779772 -22492879 + MIRb SINE MIR 88 202 -66 4 1140 356 358 19 0 chr17 72780715 72780877 -22491774 + MER63A DNA AcHobo 1 165 -45 4 1140 566 294 42 56 chr17 72781558 72781771 -22490880 - MER63A DNA AcHobo 0 210 1 4 1140 402 21 0 0 chr17 72782316 72782363 -22490288 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1140 39896 33 0 0 chr17 72782827 72788238 -22484413 - L1Md_T LINE L1 0 6582 1170 4 1140 5718 151 34 41 chr17 72788244 72789353 -22483298 - L1Md_T LINE L1 -5411 1205 104 4 1140 1613 276 63 28 chr17 72789840 72790642 -22482009 + L1MA4 LINE L1 5380 6172 -1301 4 1140 24 0 0 0 chr17 72790735 72790759 -22481892 + AT_rich Low_complexity Low_complexity 1 24 0 4 1140 2561 157 14 5 chr17 72792312 72792729 -22479922 + MTC LTR MaLR 1 421 0 4 1140 1268 96 11 5 chr17 72793431 72793619 -22479032 + L1_Mus3 LINE L1 6450 6638 0 4 1140 1038 325 88 37 chr17 72793623 72794330 -22478321 + HAL1 LINE L1 418 1160 -1347 4 1140 704 158 14 0 chr17 72794436 72794582 -22478069 + CT-rich Low_complexity Low_complexity 3 150 0 4 1140 468 234 40 16 chr17 72794684 72794810 -22477841 + B1F SINE Alu 3 131 -18 4 1140 416 272 132 107 chr17 72795047 72795820 -22476831 + HAL1 LINE L1 1502 2293 -214 4 1140 255 31 0 0 chr17 72795896 72795928 -22476723 + (TACTG)n Simple_repeat Simple_repeat 2 33 0 4 1140 324 0 0 0 chr17 72796000 72796036 -22476615 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 1140 384 286 61 55 chr17 72796272 72796435 -22476216 + MER63D DNA AcHobo 726 889 -172 4 1140 575 275 135 45 chr17 72797172 72797416 -22475235 + B4A SINE B4 1 266 -26 4 1140 213 39 0 0 chr17 72797453 72797479 -22475172 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1140 3533 27 0 0 chr17 72798267 72798670 -22473981 + L1Md_F2 LINE L1 5912 6314 -268 4 1140 2260 105 84 49 chr17 72798670 72799121 -22473530 + IAPLTR2_Mm LTR ERVK 1 467 -8 4 1140 59209 11 5 2 chr17 72799122 72805586 -22467065 + IAPEz-int LTR ERVK 1 6481 0 4 1140 2267 103 84 49 chr17 72805586 72806037 -22466614 + IAPLTR2_Mm LTR ERVK 1 467 -8 4 1140 2211 48 0 4 chr17 72806045 72806320 -22466331 + L1Md_F2 LINE L1 6309 6582 0 4 1140 615 279 25 45 chr17 72806987 72807034 -22465617 - B3A SINE B2 -1 197 159 4 1140 498 33 0 0 chr17 72807034 72807094 -22465557 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1140 615 279 25 45 chr17 72807094 72807245 -22465406 - B3A SINE B2 -40 158 3 4 1140 618 287 95 39 chr17 72807714 72807931 -22464720 + B4 SINE B4 1 230 -62 4 1140 616 301 6 6 chr17 72807931 72808098 -22464553 + B3 SINE B2 1 167 -49 4 1140 402 21 0 0 chr17 72808104 72808151 -22464500 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1140 1496 184 109 9 chr17 72808883 72809136 -22463515 + Lx8 LINE L1 6728 7005 -468 4 1140 1054 184 65 14 chr17 72809136 72809351 -22463300 - URR1A DNA MER1_type 0 226 1 4 1140 1496 184 109 9 chr17 72809351 72809426 -22463225 + Lx8 LINE L1 7006 7089 -384 4 1140 512 155 169 17 chr17 72809456 72809574 -22463077 + B1_Mur2 SINE Alu 14 149 0 4 1140 638 234 95 115 chr17 72809577 72809915 -22462736 + Lx8 LINE L1 7136 7466 -7 4 1140 1550 189 89 20 chr17 72810686 72810743 -22461908 + ORR1D1 LTR MaLR 1 53 -321 4 1140 2380 119 68 3 chr17 72810743 72811113 -22461538 + ORR1B1 LTR MaLR 1 394 0 4 1140 1550 189 89 20 chr17 72811113 72811405 -22461246 + ORR1D1 LTR MaLR 54 374 0 4 1140 180 0 0 162 chr17 72814280 72814447 -22458204 + (GCCTG)n Simple_repeat Simple_repeat 1 140 0 4 1140 294 0 0 160 chr17 72814478 72814628 -22458023 + (GCCTG)n Simple_repeat Simple_repeat 5 130 0 4 1140 606 63 0 0 chr17 72815787 72815866 -22456785 + (TTCTG)n Simple_repeat Simple_repeat 4 82 0 4 1140 1188 155 82 5 chr17 72815968 72816175 -22456476 - URR1B DNA MER1_type 0 225 3 4 1140 183 129 0 0 chr17 72817747 72817778 -22454873 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1140 221 267 47 14 chr17 72817910 72817987 -22454664 - MIRb SINE MIR -89 173 92 4 1140 4601 152 71 69 chr17 72820267 72821163 -22451488 + RMER19B LTR ERVK 1 898 -4 4 1140 438 319 95 15 chr17 72821465 72821729 -22450922 + B4A SINE B4 4 288 -4 4 1140 361 331 49 37 chr17 72823375 72823538 -22449113 + MER5B DNA MER1_type 9 173 -5 4 1140 196 246 18 0 chr17 72823732 72823789 -22448862 + MIRb SINE MIR 161 218 -50 4 1140 200 298 0 0 chr17 72824567 72824614 -22448037 + (TCCA)n Simple_repeat Simple_repeat 4 50 0 4 1140 321 213 9 18 chr17 72825651 72825761 -22446890 + (TA)n Simple_repeat Simple_repeat 1 109 0 4 1140 213 74 0 0 chr17 72825761 72825788 -22446863 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 1140 428 322 11 48 chr17 72825788 72825974 -22446677 + L1M5 LINE L1 5489 5667 -457 4 1140 226 256 165 13 chr17 72826372 72826451 -22446200 - B4A SINE B4 -1 291 201 4 1140 302 308 41 70 chr17 72827839 72828010 -22444641 + B3A SINE B2 2 167 -31 4 1140 2182 90 46 21 chr17 72828139 72828468 -22444183 - L1_Mus3 LINE L1 0 6638 6302 4 1140 962 109 17 41 chr17 72828470 72828557 -22444094 + B2_Mm1t SINE B2 26 111 -82 4 1140 4570 49 9 5 chr17 72828557 72829115 -22443536 + LTRIS2 LTR ERV1 5 564 0 4 1140 962 109 17 41 chr17 72829115 72829199 -22443452 + B2_Mm1t SINE B2 112 193 0 4 1140 219 246 0 0 chr17 72829199 72829256 -22443395 + GA-rich Low_complexity Low_complexity 1 57 0 4 1140 459 204 28 19 chr17 72829256 72829376 -22443275 - ORR1C1 LTR MaLR -57 327 207 4 1140 423 0 0 0 chr17 72829492 72829539 -22443112 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1140 181 393 46 30 chr17 72829695 72829892 -22442759 + L2b LINE L2 3170 3369 -6 4 1140 1075 221 67 89 chr17 72830078 72830391 -22442260 - ORR1D1 LTR MaLR -68 306 1 4 1140 246 210 0 61 chr17 72831191 72831257 -22441394 + MTEb LTR MaLR 318 379 0 4 1140 648 171 12 136 chr17 72832137 72832299 -22440352 + B1_Mur4 SINE Alu 1 142 -8 4 1140 963 114 12 6 chr17 72832318 72832485 -22440166 + (GGAA)n Simple_repeat Simple_repeat 4 171 0 4 1140 504 0 0 0 chr17 72833651 72833707 -22438944 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 1140 596 273 118 49 chr17 72837133 72837437 -22435214 - MER44A DNA MER2_type -5 334 10 4 1140 611 240 57 0 chr17 72837583 72837718 -22434933 - B4A SINE B4 -62 230 87 4 1140 321 26 0 0 chr17 72837718 72837756 -22434895 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1140 611 240 57 0 chr17 72837756 72837795 -22434856 - B4A SINE B4 -206 86 47 4 1140 4520 163 70 16 chr17 72837942 72838798 -22433853 + RMER19B LTR ERVK 1 902 0 4 1140 706 279 93 22 chr17 72839084 72839352 -22433299 + B4A SINE B4 6 292 0 4 1140 256 296 14 0 chr17 72839569 72839640 -22433011 + PB1D10 SINE Alu 6 77 -40 4 1140 302 279 0 0 chr17 72840481 72840549 -22432102 + ID4 SINE ID 8 75 -8 4 1140 570 95 0 0 chr17 72840748 72840832 -22431819 + BC1_Mm scRNA scRNA 1 84 -68 4 1140 242 270 13 13 chr17 72840830 72840905 -22431746 + MER113 DNA MER1_type 89 163 -358 4 1140 248 0 31 0 chr17 72840932 72840964 -22431687 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 4 1140 423 56 0 0 chr17 72841101 72841155 -22431496 + (CAAAA)n Simple_repeat Simple_repeat 1 54 0 4 1140 273 182 0 0 chr17 72841206 72841261 -22431390 + (TCCA)n Simple_repeat Simple_repeat 4 58 0 4 1140 248 269 36 36 chr17 72841346 72841458 -22431193 - PB1 SINE Alu -2 125 14 4 1140 447 19 0 0 chr17 72841524 72841576 -22431075 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1140 694 298 34 38 chr17 72841592 72841885 -22430766 - B4A SINE B4 0 292 1 4 1140 253 89 59 15 chr17 72842631 72842699 -22429952 + A-rich Low_complexity Low_complexity 2 72 0 4 1140 967 279 62 30 chr17 72842785 72843155 -22429496 + RMER5 LTR ERV1 140 521 -13 4 1140 273 57 0 0 chr17 72843159 72843194 -22429457 + (TTG)n Simple_repeat Simple_repeat 2 36 0 5 1140 433 302 138 31 chr17 72844079 72844274 -22428377 + B3A SINE B2 1 216 0 5 1140 262 329 12 0 chr17 72844504 72844586 -22428065 + MER21B LTR ERV1 537 619 -244 5 1140 1338 294 133 58 chr17 72844699 72845411 -22427240 + MER21B LTR ERV1 3 768 -95 5 1140 942 9 0 0 chr17 72845629 72845736 -22426915 + (GAA)n Simple_repeat Simple_repeat 3 109 0 5 1140 275 0 29 0 chr17 72846013 72846048 -22426603 + (TC)n Simple_repeat Simple_repeat 1 36 0 5 1140 342 0 0 0 chr17 72846048 72846085 -22426566 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1140 428 316 45 0 chr17 72846147 72846324 -22426327 + MLT1B LTR MaLR 194 378 -12 5 1140 201 407 44 0 chr17 72846972 72847085 -22425566 + MIRb SINE MIR 35 152 -116 5 1140 23 0 0 0 chr17 72847164 72847187 -22425464 + AT_rich Low_complexity Low_complexity 1 23 0 5 1140 305 306 46 46 chr17 72847781 72847911 -22424740 - MER63A DNA AcHobo -53 157 28 5 1140 466 229 0 0 chr17 72848659 72848755 -22423896 - U1 snRNA snRNA -66 99 4 5 1140 1163 189 23 0 chr17 72849612 72849829 -22422822 - URR1B DNA MER1_type -3 222 1 5 1140 2074 121 9 58 chr17 72849831 72850173 -22422478 + ORR1A3 LTR MaLR 1 325 -1 5 1140 297 222 74 0 chr17 72850332 72850413 -22422238 - MIRb SINE MIR -119 149 63 5 1140 396 335 34 11 chr17 72850491 72850669 -22421982 + MIRb SINE MIR 42 223 -45 5 1140 295 322 0 0 chr17 72851896 72851983 -22420668 + ID_B1 SINE B4 83 169 -55 5 1140 368 232 50 20 chr17 72851907 72852008 -22420643 + PB1D10 SINE Alu 13 116 -1 5 1140 517 246 14 0 chr17 72852497 72852639 -22420012 + MIR3 SINE MIR 63 206 -2 5 1140 475 282 55 28 chr17 72852758 72852940 -22419711 - MIR SINE MIR -3 259 73 5 1140 301 317 95 21 chr17 72853410 72853600 -22419051 + ORR1E LTR MaLR 48 251 -108 5 1140 225 0 0 0 chr17 72853778 72853803 -22418848 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 5 1140 205 214 0 23 chr17 72854408 72854451 -22418200 + CT-rich Low_complexity Low_complexity 1 42 0 5 1140 414 101 0 0 chr17 72857765 72857834 -22414817 + (CAAAA)n Simple_repeat Simple_repeat 5 73 0 5 1140 450 0 0 0 chr17 72857950 72858000 -22414651 + (TAAAA)n Simple_repeat Simple_repeat 3 52 0 5 1140 182 331 71 26 chr17 72861103 72861258 -22411393 + MIRc SINE MIR 101 262 -6 5 1140 200 315 32 11 chr17 72862906 72862999 -22409652 - MIRb SINE MIR -9 259 165 5 1140 661 272 153 12 chr17 72863055 72863304 -22409347 - B4A SINE B4 -2 290 7 5 1140 438 20 0 0 chr17 72864432 72864483 -22408168 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1140 240 111 0 0 chr17 72865240 72865276 -22407375 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 1140 850 269 65 11 chr17 72865328 72865591 -22407060 - B4A SINE B4 -8 284 8 5 1140 1058 105 0 0 chr17 72865885 72866028 -22406623 + B1_Mus1 SINE Alu 5 147 -1 5 1140 913 239 54 0 chr17 72866502 72866707 -22405944 - B3 SINE B2 0 216 1 5 1140 248 365 0 0 chr17 72867195 72867269 -22405382 + B4A SINE B4 205 278 -14 5 1140 303 28 0 0 chr17 72867273 72867309 -22405342 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1140 372 313 112 36 chr17 72867713 72868370 -22404281 + L1MEf LINE L1 645 1351 -5064 5 1140 652 103 14 14 chr17 72868370 72868508 -22404143 + (CAGAGA)n Simple_repeat Simple_repeat 1 138 0 5 1140 224 283 17 0 chr17 72868540 72868600 -22404051 + ID4_ SINE ID 17 77 -6 5 1140 361 317 6 18 chr17 72868610 72868777 -22403874 + L1MEf LINE L1 1333 1497 -4918 5 1140 495 300 97 4 chr17 72868854 72869102 -22403549 + L1ME2 LINE L1 5778 6048 -116 5 1140 319 305 124 60 chr17 72870149 72870334 -22402317 - MIR SINE MIR -65 197 1 5 1140 471 253 79 40 chr17 72871326 72871478 -22401173 + RSINE1 SINE B4 2 159 -6 5 1140 180 250 23 0 chr17 72871723 72871767 -22400884 - L3 LINE CR1 -29 4460 4416 5 1140 238 268 0 18 chr17 72872298 72872355 -22400296 + CT-rich Low_complexity Low_complexity 2 57 0 5 1140 194 109 85 21 chr17 72873511 72873605 -22399046 + (TA)n Simple_repeat Simple_repeat 2 101 0 5 1140 307 265 29 0 chr17 72873639 72873707 -22398944 + B3A SINE B2 1 70 -128 5 1140 499 272 41 6 chr17 72873817 72873987 -22398664 + L1MA4 LINE L1 5763 5938 -362 5 1140 429 129 0 0 chr17 72874859 72874929 -22397722 + (CA)n Simple_repeat Simple_repeat 1 70 0 5 1141 733 227 123 12 chr17 72876409 72876689 -22395962 - ORR1E LTR MaLR -4 375 39 5 1141 273 296 29 15 chr17 72876729 72876866 -22395785 + GA-rich Low_complexity Low_complexity 1 139 0 5 1141 281 241 114 11 chr17 72878414 72878502 -22394149 - L2c LINE L2 0 3387 3291 5 1141 468 0 0 0 chr17 72878722 72878774 -22393877 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1141 594 318 15 15 chr17 72878846 72879047 -22393604 - B4A SINE B4 -85 207 7 5 1141 330 281 51 53 chr17 72879224 72879397 -22393254 + L1ME3A LINE L1 5733 5901 -339 5 1141 192 282 38 25 chr17 72880276 72880356 -22392295 + L2 LINE L2 2830 2910 -509 5 1141 195 302 91 23 chr17 72881069 72881157 -22391494 - MIRc SINE MIR -14 254 161 5 1141 305 238 99 38 chr17 72881970 72882101 -22390550 + MLT1A0 LTR MaLR 19 157 -208 5 1141 209 304 0 18 chr17 72884255 72884312 -22388339 + MIRc SINE MIR 42 97 -171 5 1141 1038 217 118 33 chr17 72884997 72885425 -22387226 - L1MD2 LINE L1 -1 6358 5890 5 1141 430 333 8 0 chr17 72885787 72885919 -22386732 + ID_B1 SINE B4 77 209 -15 5 1141 306 294 109 79 chr17 72886263 72886529 -22386122 + B4 SINE B4 2 275 -17 5 1141 213 163 0 0 chr17 72886560 72886609 -22386042 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1141 186 43 0 0 chr17 72886625 72886648 -22386003 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 5 1141 524 308 95 45 chr17 72886859 72887196 -22385455 - ORR1E LTR MaLR -5 354 1 5 1141 565 270 59 10 chr17 72887588 72887790 -22384861 - L1MA6 LINE L1 -4 6296 6085 5 1141 198 0 0 0 chr17 72887827 72887849 -22384802 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 1141 1298 255 40 27 chr17 72888074 72888521 -22384130 + L1M2 LINE L1 2573 3025 -3118 5 1141 591 188 26 0 chr17 72888545 72888662 -22383989 + B1_Mur1 SINE Alu 30 149 0 5 1141 875 133 0 13 chr17 72888664 72888816 -22383835 + (GGAGA)n Simple_repeat Simple_repeat 5 154 0 5 1141 1427 255 56 61 chr17 72888881 72889619 -22383032 + L1M2 LINE L1 3029 3762 -2378 5 1141 719 310 159 30 chr17 72889609 72889981 -22382670 + Lx8 LINE L1 6765 7184 -289 5 1141 306 279 0 0 chr17 72890170 72890238 -22382413 + RMER15 LTR ERVL 403 470 -105 5 1141 1862 277 105 52 chr17 72890431 72892064 -22380587 + L1M2 LINE L1 3739 5470 -821 5 1141 440 317 132 46 chr17 72892065 72892392 -22380259 - MER57C2 LTR ERV1 0 434 80 5 1141 225 159 0 0 chr17 72892490 72892534 -22380117 + GA-rich Low_complexity Low_complexity 2 45 0 5 1141 319 266 49 55 chr17 72892542 72892705 -22379946 + L1M2 LINE L1 5504 5665 -632 5 1141 222 91 0 0 chr17 72894117 72894150 -22378501 + (CAT)n Simple_repeat Simple_repeat 3 35 0 5 1141 21 0 0 0 chr17 72895095 72895116 -22377535 + AT_rich Low_complexity Low_complexity 1 21 0 5 1141 459 309 51 55 chr17 72895131 72895405 -22377246 + B4 SINE B4 2 274 -18 5 1141 402 21 0 0 chr17 72895424 72895471 -22377180 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 1141 291 54 0 0 chr17 72895484 72895521 -22377130 + (CAGA)n Simple_repeat Simple_repeat 4 40 0 5 1141 226 358 18 0 chr17 72897126 72897235 -22375416 + MIRc SINE MIR 85 195 -73 5 1141 306 337 67 10 chr17 72897369 72897564 -22375087 - L2a LINE L2 -160 3266 3061 5 1141 1298 162 18 0 chr17 72897634 72897856 -22374795 - URR1A DNA MER1_type 0 226 1 5 1141 958 325 82 30 chr17 72897863 72898365 -22374286 + MLT1G3 LTR MaLR 28 578 -17 5 1141 342 0 0 0 chr17 72899401 72899439 -22373212 + (TTG)n Simple_repeat Simple_repeat 2 39 0 5 1141 263 372 26 58 chr17 72899472 72899572 -22373079 + RSINE1 SINE B4 17 117 -48 5 1141 1071 64 0 0 chr17 72899572 72899712 -22372939 + (TAGA)n Simple_repeat Simple_repeat 1 140 0 5 1141 263 372 26 58 chr17 72899712 72899765 -22372886 + RSINE1 SINE B4 118 165 0 5 1141 360 162 27 13 chr17 72902244 72902319 -22370332 + MTE2a LTR MaLR 290 365 -14 5 1141 449 286 51 23 chr17 72902345 72902560 -22370091 + L1MB4 LINE L1 5656 5876 -304 5 1141 294 313 99 103 chr17 72902560 72902852 -22369799 + B4 SINE B4 2 292 0 5 1141 238 304 121 14 chr17 72903758 72903915 -22368736 + MIRb SINE MIR 80 254 -8 5 1141 210 174 0 0 chr17 72903916 72903962 -22368689 + (ATG)n Simple_repeat Simple_repeat 1 46 0 5 1141 446 322 0 17 chr17 72903968 72904145 -22368506 + (ATGGTG)n Simple_repeat Simple_repeat 6 179 0 5 1141 324 83 0 0 chr17 72904166 72904214 -22368437 + (TGAA)n Simple_repeat Simple_repeat 4 51 0 5 1141 394 309 62 95 chr17 72904241 72904545 -22368106 + ORR1E LTR MaLR 6 299 -60 5 1141 2348 161 82 25 chr17 72904548 72905343 -22367308 - RMER19B LTR ERVK 0 902 1 5 1141 359 283 25 38 chr17 72906006 72906188 -22366463 + L2a LINE L2 3183 3414 -12 5 1141 288 200 31 0 chr17 72909048 72909113 -22363538 - Charlie4z DNA MER1_type 0 167 101 5 1141 629 332 9 5 chr17 72909354 72909575 -22363076 + ID_B1 SINE B4 3 224 0 5 1141 966 260 90 36 chr17 72909838 72909877 -22362774 - ORR1E LTR MaLR 0 359 317 5 1141 2553 118 45 126 chr17 72909877 72910227 -22362424 - RLTR41 LTR ERV1 0 446 133 5 1141 231 36 0 0 chr17 72910227 72910255 -22362396 + (CCCA)n Simple_repeat Simple_repeat 1 28 0 5 1141 2553 118 45 126 chr17 72910255 72910389 -22362262 - RLTR41 LTR ERV1 -314 132 1 5 1141 966 260 90 36 chr17 72910389 72910684 -22361967 - ORR1E LTR MaLR -43 316 7 5 1141 244 277 31 0 chr17 72911869 72911934 -22360717 + PB1D10 SINE Alu 42 108 -9 5 1141 265 313 13 39 chr17 72912011 72912167 -22360484 + GA-rich Low_complexity Low_complexity 5 156 0 6 1141 609 304 10 5 chr17 72912324 72912519 -22360132 - B3 SINE B2 -19 197 2 6 1141 180 0 0 0 chr17 72912970 72912990 -22359661 + (CACCC)n Simple_repeat Simple_repeat 3 22 0 6 1141 368 317 325 46 chr17 72913073 72913431 -22359220 - MLT1G LTR MaLR -65 490 33 6 1141 298 300 12 0 chr17 72913487 72913567 -22359084 - MER5A1 DNA MER1_type -53 113 33 6 1141 479 273 8 0 chr17 72914662 72914783 -22357868 + ID_B1 SINE B4 96 217 -7 6 1141 579 130 0 0 chr17 72915111 72915234 -22357417 + (TC)n Simple_repeat Simple_repeat 1 123 0 6 1141 243 0 0 0 chr17 72915234 72915261 -22357390 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 1141 180 161 16 31 chr17 72915972 72916036 -22356615 + CT-rich Low_complexity Low_complexity 4 66 0 6 1141 259 279 0 0 chr17 72916038 72916099 -22356552 + (TA)n Simple_repeat Simple_repeat 1 61 0 6 1141 672 305 124 4 chr17 72916107 72916364 -22356287 - B4 SINE B4 -4 288 1 6 1141 188 281 60 24 chr17 72916727 72916811 -22355840 - MIR3 SINE MIR -12 196 110 6 1141 341 320 86 68 chr17 72917396 72917674 -22354977 + B4 SINE B4 3 285 -7 6 1141 300 53 0 0 chr17 72920245 72920283 -22352368 + (TC)n Simple_repeat Simple_repeat 1 38 0 6 1141 229 246 0 16 chr17 72920343 72920405 -22352246 + (TA)n Simple_repeat Simple_repeat 1 61 0 6 1141 577 224 30 7 chr17 72921620 72921755 -22350896 - B1F SINE Alu 0 149 12 6 1141 724 304 136 31 chr17 72922054 72922407 -22350244 + MLT1B LTR MaLR 1 390 0 6 1141 480 322 38 11 chr17 72922700 72922885 -22349766 + B4 SINE B4 40 229 -63 6 1141 4440 117 52 19 chr17 72923154 72923275 -22349376 - Lx LINE L1 -2 6652 6535 6 1141 195 42 0 0 chr17 72923275 72923299 -22349352 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 6 1141 4440 117 52 19 chr17 72923299 72923895 -22348756 - Lx LINE L1 -120 6534 5914 6 1141 2231 91 165 3 chr17 72924371 72924723 -22347928 - IAPLTR2a LTR ERVK -2 409 1 6 1141 8841 49 9 13 chr17 72924725 72925809 -22346842 - IAPEz-int LTR ERVK -2 6479 5400 6 1141 18457 92 38 22 chr17 72925784 72928415 -22344236 - IAPEz-int LTR ERVK -3807 2674 3 6 1141 2231 91 165 3 chr17 72928415 72928767 -22343884 - IAPLTR2a LTR ERVK -2 409 1 6 1141 383 248 46 100 chr17 72928993 72929123 -22343528 + RSINE1 SINE B4 2 124 -41 6 1141 366 23 0 0 chr17 72929145 72929188 -22343463 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1141 518 252 8 16 chr17 72929548 72929677 -22342974 + MER5A DNA MER1_type 53 180 -9 6 1141 210 331 116 7 chr17 72931202 72931348 -22341303 + MIRb SINE MIR 50 211 -57 6 1141 2235 145 135 0 chr17 72932416 72932815 -22339836 + RLTR11B LTR ERVK 1 453 0 6 1141 429 116 0 0 chr17 72933158 72933227 -22339424 + (CA)n Simple_repeat Simple_repeat 1 69 0 6 1141 400 302 23 8 chr17 72933651 72933781 -22338870 + ORR1E LTR MaLR 1 132 -227 6 1141 342 343 127 32 chr17 72933810 72934126 -22338525 - MT2A LTR ERVL 0 533 188 6 1141 430 197 8 8 chr17 72934312 72934430 -22338221 + CT-rich Low_complexity Low_complexity 1 118 0 6 1141 784 187 107 46 chr17 72934557 72934753 -22337898 + B3 SINE B2 3 210 -6 6 1141 215 241 0 18 chr17 72936891 72936946 -22335705 + GA-rich Low_complexity Low_complexity 1 54 0 6 1141 269 381 0 0 chr17 72937738 72937835 -22334816 + PB1D10 SINE Alu 1 97 -20 6 1141 306 0 0 0 chr17 72938891 72938925 -22333726 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 1141 399 176 24 0 chr17 72938926 72939051 -22333600 + GA-rich Low_complexity Low_complexity 1 128 0 6 1141 990 112 0 0 chr17 72939083 72939261 -22333390 + (GA)n Simple_repeat Simple_repeat 1 178 0 6 1141 567 78 0 0 chr17 72940122 72940199 -22332452 + (GGGA)n Simple_repeat Simple_repeat 4 80 0 6 1141 2145 156 22 30 chr17 72940254 72940624 -22332027 + ORR1B2 LTR MaLR 1 367 0 6 1141 452 292 130 28 chr17 72940791 72941144 -22331507 + L1MEc LINE L1 717 1105 -5295 6 1141 293 274 54 30 chr17 72941333 72941455 -22331196 + PB1D7 SINE Alu 12 139 -10 6 1141 219 271 127 14 chr17 72941479 72941550 -22331101 + ID4_ SINE ID 5 83 0 6 1141 283 309 33 49 chr17 72941966 72942150 -22330501 + L1MEf LINE L1 28 208 -5992 6 1141 1073 85 15 22 chr17 72942259 72942880 -22329771 + (TG)n Simple_repeat Simple_repeat 1 616 0 6 1141 306 315 87 20 chr17 72943590 72943739 -22328912 - MIRb SINE MIR -60 208 50 6 1141 468 255 12 137 chr17 72943873 72943962 -22328689 + B1F SINE Alu 3 70 -79 6 1141 1426 65 16 21 chr17 72943962 72944151 -22328500 + B2_Mm2 SINE B2 3 190 -5 6 1141 468 255 12 137 chr17 72944151 72944229 -22328422 + B1F SINE Alu 71 149 0 6 1141 239 175 0 17 chr17 72944236 72944294 -22328357 + GA-rich Low_complexity Low_complexity 1 57 0 6 1141 421 305 33 75 chr17 72944301 72944370 -22328281 + L1ME3 LINE L1 5841 5906 -256 6 1141 1472 226 47 19 chr17 72944370 72944735 -22327916 - MTE2a LTR MaLR -2 377 3 6 1141 421 305 33 75 chr17 72944735 72944906 -22327745 + L1ME3 LINE L1 5907 6071 -91 6 1141 711 80 0 0 chr17 72945263 72945375 -22327276 + (TG)n Simple_repeat Simple_repeat 1 112 0 6 1141 186 274 138 46 chr17 72945387 72945517 -22327134 - MIR SINE MIR -47 215 74 6 1141 753 199 112 0 chr17 72946223 72946384 -22326267 - MTE2b LTR MaLR -39 340 162 6 1141 895 134 28 0 chr17 72948061 72948203 -22324448 + B1_Mur4 SINE Alu 5 150 0 6 1141 351 0 0 0 chr17 72948226 72948265 -22324386 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1141 229 321 55 59 chr17 72948766 72948968 -22323683 - L3 LINE CR1 -274 4215 4015 6 1141 567 0 0 0 chr17 72951099 72951162 -22321489 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 1141 240 308 0 0 chr17 72954617 72954682 -22317969 - ID4 SINE ID -13 70 6 6 1141 569 257 20 67 chr17 72954714 72954864 -22317787 - B1F SINE Alu 0 149 7 6 1141 381 319 52 40 chr17 72956070 72956243 -22316408 - MIRc SINE MIR -38 230 56 6 1141 251 323 0 0 chr17 72956505 72956570 -22316081 + tRNA-Ala-GCY_ tRNA tRNA 1 65 -10 6 1141 277 331 61 53 chr17 72957127 72957258 -22315393 - L2b LINE L2 0 3375 3244 6 1141 919 291 63 0 chr17 72958300 72958568 -22314083 + B4A SINE B4 2 286 -6 6 1141 234 91 0 0 chr17 72958943 72958976 -22313675 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1141 184 290 67 101 chr17 72959732 72959851 -22312800 - L4 LINE RTE -1095 934 820 6 1141 370 270 11 0 chr17 72960181 72960270 -22312381 - B4A SINE B4 -17 275 186 6 1141 239 269 25 25 chr17 72960235 72960315 -22312336 - PB1D9 SINE Alu -7 113 34 6 1141 277 294 15 0 chr17 72960324 72960392 -22312259 - B4A SINE B4 -197 95 27 6 1141 673 319 201 15 chr17 72961581 72961979 -22310672 + MLT1F LTR MaLR 70 541 -7 6 1141 835 295 104 12 chr17 72962205 72962627 -22310024 - L1ME4a LINE L1 -1 6123 5663 6 1141 766 321 4 60 chr17 72962904 72963156 -22309495 + Charlie1 DNA MER1_type 3 240 -2541 6 1141 216 0 0 0 chr17 72963240 72963264 -22309387 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 1141 279 0 0 0 chr17 72963840 72963871 -22308780 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1141 377 236 96 78 chr17 72963992 72964107 -22308544 - PB1 SINE Alu -9 118 2 6 1141 329 295 45 39 chr17 72964196 72964435 -22308216 + B4 SINE B4 3 246 -46 6 1141 225 0 0 0 chr17 72964435 72964460 -22308191 + (GA)n Simple_repeat Simple_repeat 1 25 0 6 1141 551 135 0 10 chr17 72964495 72964592 -22308059 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 6 1141 2847 47 0 3 chr17 72964601 72964939 -22307712 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 1141 25281 29 41 9 chr17 72964939 72967914 -22304737 + IAPEz-int LTR ERVK 8 3076 -3405 6 1141 7560 22 3 1 chr17 72967900 72968750 -22303901 + IAPEz-int LTR ERVK 5630 6481 0 6 1141 2861 45 0 3 chr17 72968750 72969088 -22303563 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 1141 273 299 71 49 chr17 72969507 72969774 -22302877 - L1ME4a LINE L1 -1667 4479 4207 6 1141 867 70 0 0 chr17 72970619 72970734 -22301917 + (CAG)n Simple_repeat Simple_repeat 2 116 0 6 1141 1089 286 60 22 chr17 72970804 72971169 -22301482 + MTE2a LTR MaLR 1 379 0 6 1141 279 351 33 26 chr17 72973074 72973226 -22299425 + Charlie20a DNA Charlie 181 333 -474 6 1141 324 143 0 0 chr17 72973345 72973401 -22299250 + (CACCAT)n Simple_repeat Simple_repeat 1 56 0 6 1141 622 239 170 0 chr17 72973405 72973564 -22299087 - B3 SINE B2 -30 186 1 6 1141 891 94 0 0 chr17 72974328 72974455 -22298196 + (GGA)n Simple_repeat Simple_repeat 3 129 0 6 1141 423 256 80 36 chr17 72974923 72975061 -22297590 - MER5A1 DNA MER1_type -22 144 1 6 1141 270 136 0 0 chr17 72975136 72975180 -22297471 + (TATG)n Simple_repeat Simple_repeat 2 45 0 6 1141 285 146 0 0 chr17 72975177 72975225 -22297426 + (TTA)n Simple_repeat Simple_repeat 3 50 0 6 1141 942 253 103 101 chr17 72975555 72975933 -22296718 + MTE2a LTR MaLR 1 379 0 6 1141 275 242 0 0 chr17 72976113 72976175 -22296476 - RMER15 LTR ERVL -106 469 408 6 1141 312 233 0 14 chr17 72976212 72976286 -22296365 - Lx8 LINE L1 -247 7226 7154 6 1141 930 302 69 33 chr17 72976428 72976760 -22295891 - LTR16C LTR ERVL 0 489 146 6 1141 255 61 0 0 chr17 72978034 72978067 -22294584 + (T)n Simple_repeat Simple_repeat 1 33 0 6 1141 38609 30 0 1 chr17 72978184 72984992 -22287659 - L1Md_T LINE L1 0 6585 1 6 1141 202 270 0 33 chr17 72985170 72985262 -22287389 + (TTA)n Simple_repeat Simple_repeat 1 89 0 6 1141 359 342 12 12 chr17 72985413 72985573 -22287078 + (CACCAT)n Simple_repeat Simple_repeat 2 161 0 6 1141 684 291 40 0 chr17 72985609 72985784 -22286867 - B3A SINE B2 -16 182 1 6 1141 624 238 148 141 chr17 72987038 72987233 -22285418 + B4A SINE B4 1 219 -73 6 1141 1450 155 195 37 chr17 72987233 72987428 -22285223 - RMER17C LTR ERVK 0 410 221 6 1141 587 60 12 0 chr17 72987428 72987512 -22285139 + (GA)n Simple_repeat Simple_repeat 2 86 0 6 1141 1450 155 195 37 chr17 72987512 72987670 -22284981 - RMER17C LTR ERVK -190 220 2 6 1141 624 238 148 141 chr17 72987670 72987758 -22284893 + B4A SINE B4 220 286 -6 6 1141 450 0 0 0 chr17 72987873 72987923 -22284728 + (TTTTG)n Simple_repeat Simple_repeat 3 52 0 6 1141 248 265 29 14 chr17 72988422 72988491 -22284160 - ID2 SINE ID -10 73 4 6 1141 294 295 23 69 chr17 72988503 72988634 -22284017 - PB1 SINE Alu -2 125 1 6 1141 304 286 76 0 chr17 72988713 72988818 -22283833 - MER82 DNA MER2_type 0 653 541 7 1141 1445 258 99 5 chr17 72988847 72989280 -22283371 - MER82 DNA MER2_type -179 474 1 7 1141 372 262 35 20 chr17 72989293 72989427 -22283224 - MIRc SINE MIR -45 163 30 7 1141 189 213 0 0 chr17 72989938 72989985 -22282666 + GA-rich Low_complexity Low_complexity 1 47 0 7 1141 450 0 0 0 chr17 72990166 72990216 -22282435 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 1141 8759 23 0 0 chr17 72990721 72992396 -22280255 - L1Md_T LINE L1 0 6582 4908 7 1141 576 202 9 27 chr17 72992556 72992668 -22279983 - B1_Mus1 SINE Alu 0 148 39 7 1141 297 0 0 0 chr17 72992668 72992701 -22279950 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 1141 450 0 0 0 chr17 72992701 72992750 -22279901 + (GA)n Simple_repeat Simple_repeat 1 50 0 7 1141 357 370 63 11 chr17 72993608 72993783 -22278868 - MIR3 SINE MIR -6 202 19 7 1141 534 307 52 73 chr17 72993968 72994232 -22278419 + ORR1E LTR MaLR 39 296 -63 7 1141 4227 174 53 71 chr17 72994232 72995150 -22277501 + RMER19B LTR ERVK 1 902 0 7 1141 534 307 52 73 chr17 72995150 72995212 -22277439 + ORR1E LTR MaLR 297 358 -1 7 1141 280 339 126 21 chr17 72995845 72996083 -22276568 - L2c LINE L2 -45 3342 3080 7 1141 201 333 12 62 chr17 72997000 72997080 -22275571 + L2c LINE L2 3277 3352 -35 7 1141 227 344 31 20 chr17 72997574 72997672 -22274979 - MLT1M LTR MaLR -466 206 108 7 1141 897 157 178 0 chr17 72997943 72998134 -22274517 - URR1B DNA MER1_type 0 225 1 7 1141 1046 257 35 24 chr17 72998811 72999098 -22273553 + B4 SINE B4 3 292 0 7 1141 255 79 0 0 chr17 72999138 72999176 -22273475 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 1141 215 206 0 93 chr17 72999331 72999438 -22273213 + A-rich Low_complexity Low_complexity 4 100 0 7 1141 21 0 0 0 chr17 72999686 72999707 -22272944 + AT_rich Low_complexity Low_complexity 1 21 0 7 1141 182 293 38 57 chr17 73000138 73000243 -22272408 + L3 LINE CR1 3954 4056 -433 1 1141 213 286 14 14 chr17 73000738 73000809 -22271842 + (TG)n Simple_repeat Simple_repeat 2 72 0 2 1141 444 247 130 65 chr17 73000837 73001084 -22271567 - B4A SINE B4 -27 265 3 3 1141 186 43 0 0 chr17 73001261 73001284 -22271367 + (GA)n Simple_repeat Simple_repeat 2 24 0 4 1141 29 70 0 0 chr17 73001711 73001768 -22270883 + AT_rich Low_complexity Low_complexity 1 57 0 5 1141 300 212 148 12 chr17 73001930 73002011 -22270640 - B3 SINE B2 -123 93 2 6 1141 584 204 17 6 chr17 73002027 73002204 -22270447 + (CA)n Simple_repeat Simple_repeat 2 180 0 7 1141 246 305 143 53 chr17 73002217 73002518 -22270133 - L1MC4 LINE L1 -185 7857 7530 8 1141 1249 184 9 5 chr17 73003432 73003656 -22268995 - URR1B DNA MER1_type 0 225 1 9 1141 271 324 22 65 chr17 73004201 73004386 -22268265 + MIRb SINE MIR 24 200 -68 1 1141 221 200 0 22 chr17 73004602 73004648 -22268003 - B3 SINE B2 -170 46 2 1 1141 1205 61 0 0 chr17 73004831 73004979 -22267672 + B1_Mus1 SINE Alu 1 148 0 1 1142 194 269 100 25 chr17 73009055 73009135 -22263516 - MIR SINE MIR -163 99 14 1 1142 3215 196 57 31 chr17 73010260 73010977 -22261674 + Lx7 LINE L1 6959 7694 -2 1 1142 522 0 0 0 chr17 73010977 73011035 -22261616 + (GGAA)n Simple_repeat Simple_repeat 3 60 0 1 1142 278 362 0 0 chr17 73011144 73011282 -22261369 + (CCCTG)n Simple_repeat Simple_repeat 3 140 0 1 1142 567 189 0 20 chr17 73012117 73012251 -22260400 - B1_Mur2 SINE Alu -14 133 9 1 1142 197 352 71 14 chr17 73013840 73013981 -22258670 + L2c LINE L2 3014 3162 -225 1 1142 1506 281 90 38 chr17 73014227 73014523 -22258128 + Charlie1a DNA MER1_type 8 333 -1122 1 1142 1159 68 0 0 chr17 73014523 73014669 -22257982 + B1_Mus1 SINE Alu 2 147 -1 2 1142 324 0 0 0 chr17 73014670 73014706 -22257945 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1142 461 17 17 0 chr17 73014706 73014763 -22257888 + (GA)n Simple_repeat Simple_repeat 1 59 0 2 1142 1506 281 90 38 chr17 73014763 73015098 -22257553 + Charlie1a DNA MER1_type 334 674 -781 1 1142 632 316 79 63 chr17 73015664 73016042 -22256609 + HERVL74-int LTR ERVL 252 635 -2921 2 1142 349 312 0 9 chr17 73016443 73016553 -22256098 + HERVL74-int LTR ERVL 1127 1235 -4450 2 1142 412 333 8 0 chr17 73017079 73017211 -22255440 - ID_B1 SINE B4 -8 216 84 2 1142 2664 283 108 59 chr17 73017608 73018170 -22254481 - Lx7 LINE L1 -358 7338 6777 2 1142 1599 227 62 6 chr17 73018170 73018524 -22254127 - ORR1D1 LTR MaLR 0 374 1 2 1142 2664 283 108 59 chr17 73018524 73019032 -22253619 - Lx7 LINE L1 -920 6776 6215 2 1142 1538 325 92 103 chr17 73019059 73021010 -22251641 + HERVL74-int LTR ERVL 1242 3170 -2515 2 1142 264 374 145 22 chr17 73021405 73021681 -22250970 - LTR33A_ LTR ERVL -207 324 15 2 1142 372 363 32 25 chr17 73021938 73022223 -22250428 + L3 LINE CR1 4020 4306 -183 2 1142 342 314 56 28 chr17 73023045 73023189 -22249462 + ORR1E LTR MaLR 3 150 -209 2 1142 264 314 101 34 chr17 73024638 73024846 -22247805 + MIRc SINE MIR 15 236 -32 3 1142 220 257 14 41 chr17 73024877 73024950 -22247701 + CT-rich Low_complexity Low_complexity 2 72 0 3 1142 1025 279 143 12 chr17 73025047 73025446 -22247205 + MLT2B1 LTR ERVL 5 455 -65 3 1142 269 155 17 0 chr17 73025485 73025543 -22247108 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 3 1142 227 159 0 0 chr17 73025799 73025843 -22246808 - MIRb SINE MIR -46 222 179 3 1142 513 84 0 0 chr17 73026664 73026735 -22245916 + (GA)n Simple_repeat Simple_repeat 2 72 0 3 1142 296 71 0 0 chr17 73027500 73027542 -22245109 - U2 snRNA snRNA -146 42 1 3 1142 271 350 0 137 chr17 73027891 73028030 -22244621 + PB1 SINE Alu 6 125 -2 3 1142 1044 322 68 8 chr17 73028055 73028449 -22244202 + Lx8 LINE L1 6933 7350 -123 3 1142 501 17 0 0 chr17 73028525 73028583 -22244068 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 1142 271 293 0 47 chr17 73028632 73028718 -22243933 + ID4_ SINE ID 2 83 0 4 1142 932 169 0 6 chr17 73028760 73028939 -22243712 + GA-rich Low_complexity Low_complexity 3 180 0 4 1142 1200 111 0 0 chr17 73028951 73029131 -22243520 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 4 1142 263 191 15 0 chr17 73029803 73029871 -22242780 + GA-rich Low_complexity Low_complexity 4 72 0 4 1142 6348 99 64 8 chr17 73030184 73031127 -22241524 - Lx3A LINE L1 -345 6636 5642 4 1142 207 0 0 0 chr17 73031276 73031299 -22241352 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1142 337 257 81 91 chr17 73031343 73031540 -22241111 - B2_Mm2 SINE B2 0 195 1 4 1142 181 229 29 0 chr17 73033005 73033040 -22239611 + L2c LINE L2 3273 3308 -79 4 1142 1052 66 15 0 chr17 73033961 73034097 -22238554 + B1_Mus1 SINE Alu 2 139 -9 4 1142 210 37 0 0 chr17 73034097 73034124 -22238527 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1142 662 113 0 9 chr17 73034203 73034310 -22238341 + (TGGA)n Simple_repeat Simple_repeat 4 109 0 5 1142 393 117 0 0 chr17 73034779 73034839 -22237812 + (TCC)n Simple_repeat Simple_repeat 3 62 0 5 1142 777 22 0 0 chr17 73034841 73034932 -22237719 + (CA)n Simple_repeat Simple_repeat 2 92 0 5 1142 21 36 0 0 chr17 73035635 73035663 -22236988 + AT_rich Low_complexity Low_complexity 1 28 0 5 1142 386 304 59 80 chr17 73035665 73035904 -22236747 - LTR16E1 LTR ERVL -49 489 256 5 1142 1399 147 197 0 chr17 73035946 73036246 -22236405 + ORR1B2 LTR MaLR 1 359 -8 5 1142 312 27 0 0 chr17 73036363 73036400 -22236251 + (ATTG)n Simple_repeat Simple_repeat 4 40 0 5 1142 419 258 151 16 chr17 73036425 73036551 -22236100 - B4 SINE B4 -138 154 12 5 1142 190 271 118 0 chr17 73036566 73036651 -22236000 + MIR SINE MIR 34 128 -80 5 1142 284 319 0 21 chr17 73037668 73037764 -22234887 + GA-rich Low_complexity Low_complexity 1 94 0 5 1142 277 158 53 0 chr17 73039435 73039511 -22233140 + (CACCC)n Simple_repeat Simple_repeat 2 81 0 6 1142 290 115 19 0 chr17 73039551 73039603 -22233048 + (TTCA)n Simple_repeat Simple_repeat 1 53 0 6 1142 326 237 113 0 chr17 73040080 73040177 -22232474 + PB1D10 SINE Alu 2 109 -8 6 1142 485 298 0 8 chr17 73041957 73042082 -22230569 + RSINE1 SINE B4 15 138 -27 6 1142 612 40 0 0 chr17 73042095 73042170 -22230481 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 6 1142 647 226 8 0 chr17 73042301 73042434 -22230217 + B4 SINE B4 157 290 -2 6 1142 2612 144 7 5 chr17 73042497 73042916 -22229735 + Lx2 LINE L1 6576 6995 -2 6 1142 186 43 0 0 chr17 73043579 73043602 -22229049 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 6 1142 733 304 52 26 chr17 73043709 73043938 -22228713 - B4 SINE B4 -11 281 45 6 1142 276 53 0 0 chr17 73043938 73043976 -22228675 + (TTG)n Simple_repeat Simple_repeat 2 39 0 6 1142 733 304 52 26 chr17 73043976 73044016 -22228635 - B4 SINE B4 -248 44 5 6 1142 413 19 19 0 chr17 73044315 73044369 -22228282 + (TC)n Simple_repeat Simple_repeat 1 55 0 7 1142 556 174 137 24 chr17 73044415 73044539 -22228112 + Lx9 LINE L1 7326 7463 -181 7 1142 1163 47 7 0 chr17 73044549 73044699 -22227952 + (CATATA)n Simple_repeat Simple_repeat 3 153 0 7 1142 458 202 24 0 chr17 73044700 73044824 -22227827 + Lx9 LINE L1 7517 7643 -1 7 1142 906 252 19 19 chr17 73044863 73045069 -22227582 + B4A SINE B4 1 206 -86 7 1142 564 296 6 64 chr17 73045070 73045243 -22227408 + RSINE1 SINE B4 2 164 -1 7 1142 287 286 0 25 chr17 73045260 73045339 -22227312 + B4 SINE B4 216 292 0 7 1142 222 261 0 0 chr17 73045353 73045399 -22227252 + polypurine Low_complexity Low_complexity 4 49 0 7 1142 264 328 29 15 chr17 73046251 73046387 -22226264 + HAL1 LINE L1 2256 2393 -114 7 1142 687 234 73 122 chr17 73047026 73047396 -22225255 + MTE2a LTR MaLR 13 364 -15 7 1142 266 335 26 39 chr17 73047403 73047565 -22225086 + MIR SINE MIR 99 254 -8 7 1142 25 51 0 0 chr17 73047594 73047633 -22225018 + AT_rich Low_complexity Low_complexity 1 39 0 7 1142 248 138 7 13 chr17 73047869 73047932 -22224719 - ORR1A4 LTR MaLR -27 300 239 8 1142 925 252 79 43 chr17 73047978 73048281 -22224370 + L1_Rod LINE L1 5313 5626 -221 8 1142 1308 232 64 26 chr17 73048297 73048674 -22223977 - RMER19A LTR ERVK -162 575 185 8 1142 827 174 0 7 chr17 73049865 73050010 -22222641 - RMER19A LTR ERVK -758 144 1 8 1142 579 289 58 0 chr17 73050027 73050217 -22222434 - RCHARR1 DNA MER1_type -771 203 3 8 1142 326 308 29 22 chr17 73050418 73050554 -22222097 - Tigger7 DNA MER2_type 0 2491 2355 8 1142 445 283 88 14 chr17 73050849 73050996 -22221655 + RSINE1 SINE B4 3 160 -5 8 1142 511 241 293 6 chr17 73051038 73051205 -22221446 + B3 SINE B2 2 216 0 8 1142 628 216 39 23 chr17 73051215 73051343 -22221308 + B1_Mur1 SINE Alu 1 130 -19 8 1142 1181 194 137 19 chr17 73051355 73051676 -22220975 + ORR1B2 LTR MaLR 2 360 -7 8 1142 415 277 125 0 chr17 73051906 73052018 -22220633 - ID_B1 SINE B4 -11 213 88 8 1142 274 330 0 0 chr17 73052200 73052294 -22220357 - Tigger7 DNA MER2_type -2397 94 1 8 1142 617 228 166 6 chr17 73052445 73052626 -22220025 + B3 SINE B2 1 210 -6 9 1142 582 237 0 30 chr17 73053007 73053142 -22219509 + B1_Mur1 SINE Alu 12 142 -7 9 1142 434 262 78 47 chr17 73053269 73053461 -22219190 + L1MA5 LINE L1 6103 6300 0 9 1142 32 81 0 0 chr17 73053653 73053727 -22218924 + AT_rich Low_complexity Low_complexity 1 74 0 9 1142 791 261 40 0 chr17 73054116 73054315 -22218336 + B3 SINE B2 1 207 -9 9 1142 381 131 0 0 chr17 73054320 73054381 -22218270 + (GAAA)n Simple_repeat Simple_repeat 3 63 0 9 1142 741 81 24 24 chr17 73054373 73054500 -22218151 + (GGGAA)n Simple_repeat Simple_repeat 2 128 0 9 1142 232 270 0 59 chr17 73054637 73054755 -22217896 + L1M5 LINE L1 3885 3995 -2151 9 1142 26 50 0 0 chr17 73055073 73055113 -22217538 + AT_rich Low_complexity Low_complexity 1 40 0 9 1142 411 248 57 81 chr17 73055147 73055270 -22217381 - B1F1 SINE Alu -1 126 7 9 1142 443 208 0 32 chr17 73055536 73055690 -22216961 + G-rich Low_complexity Low_complexity 4 152 0 1 1142 231 321 128 0 chr17 73055998 73056107 -22216544 + ORR1E LTR MaLR 14 136 -223 1 1142 736 181 169 6 chr17 73056292 73056470 -22216181 + B3 SINE B2 2 208 -8 1 1142 3779 103 50 21 chr17 73056537 73057119 -22215532 + L1VL2 LINE L1 290 888 -5447 1 1142 383 41 20 0 chr17 73057114 73057163 -22215488 - L1Md_F2 LINE L1 -1439 4444 4395 1 1142 8905 63 1 59 chr17 73057161 73057953 -22214698 + L1Md_F2 LINE L1 4404 5181 -702 1 1142 321 115 0 37 chr17 73057953 73058007 -22214644 + MamSINE1 SINE tRNA 6 57 -233 1 1142 8905 63 1 59 chr17 73058007 73058417 -22214234 + L1Md_F2 LINE L1 5182 5586 -297 1 1142 7830 60 2 27 chr17 73058417 73059224 -22213427 + L1Md_F2 LINE L1 5587 6393 -189 1 1142 1251 48 0 0 chr17 73059224 73059371 -22213280 + B1_Mm SINE Alu 1 147 0 1 1142 7830 60 2 27 chr17 73059371 73059573 -22213078 + L1Md_F2 LINE L1 6394 6571 -11 1 1142 14952 72 15 5 chr17 73059573 73061670 -22210981 + L1VL2 LINE L1 882 3000 -615 1 1142 468 0 0 0 chr17 73061773 73061825 -22210826 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 1142 654 299 67 39 chr17 73061887 73062169 -22210482 - B4A SINE B4 -2 290 1 1 1142 197 238 0 0 chr17 73062344 73062386 -22210265 + L2 LINE L2 2320 2361 -1058 1 1142 190 222 62 31 chr17 73062880 73062945 -22209706 + L2 LINE L2 2757 2823 -596 1 1142 325 345 85 32 chr17 73063321 73063662 -22208989 - MLT1I LTR MaLR -26 385 57 1 1142 200 350 148 16 chr17 73064377 73064566 -22208085 - L2 LINE L2 -475 2944 2731 1 1142 1786 238 7 202 chr17 73064648 73065407 -22207244 + RMER19C LTR ERVK 1 611 0 1 1142 279 20 19 39 chr17 73065561 73065613 -22207038 + L1Md_F2 LINE L1 6532 6582 0 1 1142 421 140 57 23 chr17 73066379 73066467 -22206184 - L1MA6 LINE L1 -416 5884 5794 1 1142 1870 298 50 17 chr17 73066472 73067110 -22205541 - Lx8 LINE L1 -20 7453 6795 1 1142 549 99 0 0 chr17 73067113 73067194 -22205457 + (CAGA)n Simple_repeat Simple_repeat 3 83 0 1 1142 2174 278 82 50 chr17 73067194 73067768 -22204883 - Lx8 LINE L1 -677 6796 6186 1 1142 426 69 0 0 chr17 73067768 73067826 -22204825 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 1142 2174 278 82 50 chr17 73067826 73068191 -22204460 - Lx8 LINE L1 -1288 6185 5828 1 1142 557 204 0 8 chr17 73068208 73068341 -22204310 + (TA)n Simple_repeat Simple_repeat 2 133 0 1 1142 264 275 25 0 chr17 73068644 73068724 -22203927 + MER5A DNA MER1_type 107 188 -1 1 1142 240 381 44 15 chr17 73069604 73069740 -22202911 - MER5A DNA MER1_type -34 155 16 1 1142 676 279 89 85 chr17 73070553 73070924 -22201727 - MTE2a LTR MaLR -14 405 18 1 1142 1807 155 66 12 chr17 73071333 73071364 -22201287 - Lx3B LINE L1 -1036 5937 5907 1 1142 3146 164 49 8 chr17 73071364 73071899 -22200752 - Lx LINE L1 -2 6652 6096 1 1142 4110 155 66 12 chr17 73071899 73072135 -22200516 - Lx3B LINE L1 -1067 5906 5670 1 1142 495 0 0 0 chr17 73072135 73072190 -22200461 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 1 1142 4110 159 54 7 chr17 73072190 73072702 -22199949 - Lx3B LINE L1 -214 5669 5124 1 1142 8318 47 1 7 chr17 73072699 73073729 -22198922 - L1Md_F2 LINE L1 -1 6581 5553 1 1142 17312 151 9 47 chr17 73073728 73075383 -22197268 - L1_Mur1 LINE L1 -762 5124 3462 1 1142 2560 46 6 6 chr17 73075383 73075711 -22196940 - L1Md_F2 LINE L1 -4 6578 6251 1 1142 17312 151 9 47 chr17 73075711 73077242 -22195409 - L1_Mur1 LINE L1 -2425 3461 2058 1 1142 4833 127 8 33 chr17 73077236 73077987 -22194664 - L1VL4 LINE L1 -5493 809 78 1 1142 554 291 75 15 chr17 73078221 73078420 -22194231 + B4A SINE B4 82 292 0 1 1142 3420 35 2 8 chr17 73078973 73079371 -22193280 + MTA_Mm LTR MaLR 1 396 0 1 1142 662 195 235 6 chr17 73079656 73079826 -22192825 + B3 SINE B2 2 210 -6 1 1142 1237 227 30 15 chr17 73081034 73081302 -22191349 + B4A SINE B4 1 272 -20 1 1142 459 52 0 0 chr17 73081302 73081360 -22191291 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 1142 499 318 47 43 chr17 73083537 73083793 -22188858 + Lx8 LINE L1 7217 7473 0 1 1142 310 298 80 23 chr17 73083882 73084057 -22188594 + L1M5 LINE L1 3770 3954 -2192 1 1142 227 325 63 71 chr17 73084221 73084347 -22188304 + L1M5 LINE L1 4917 5041 -1105 1 1142 252 0 0 0 chr17 73084479 73084507 -22188144 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1142 253 223 89 69 chr17 73084509 73084610 -22188041 + L1M5 LINE L1 5258 5360 -818 1 1142 517 291 85 22 chr17 73085012 73085341 -22187310 + L1M5 LINE L1 5348 5706 -534 1 1142 556 284 114 37 chr17 73085367 73085638 -22187013 + B4A SINE B4 1 292 0 1 1142 549 151 48 6 chr17 73085695 73085862 -22186789 + (CA)n Simple_repeat Simple_repeat 1 174 0 1 1142 705 130 39 18 chr17 73085884 73086215 -22186436 + (CA)n Simple_repeat Simple_repeat 1 338 0 1 1142 1999 128 0 44 chr17 73086461 73086805 -22185846 - Lx3B LINE L1 -810 6163 5835 1 1142 4734 142 45 1 chr17 73086808 73087569 -22185082 + Lx3B LINE L1 6171 6964 -9 1 1142 228 274 16 0 chr17 73087645 73087707 -22184944 + L1MA4 LINE L1 328 390 -6399 1 1142 4328 152 56 81 chr17 73087869 73088780 -22183871 + RMER19B LTR ERVK 3 890 -12 1 1142 895 317 88 47 chr17 73089586 73090964 -22181687 + L1MA4 LINE L1 2140 3592 -3193 1 1142 879 280 70 86 chr17 73090964 73091347 -22181304 - MTE2a LTR MaLR 0 379 3 1 1142 763 309 172 25 chr17 73091347 73091526 -22181125 + L1MA4 LINE L1 3593 3776 -3009 1 1142 1476 145 4 4 chr17 73091570 73091799 -22180852 + Lx5 LINE L1 6354 6582 -468 1 1142 1148 157 15 114 chr17 73091786 73092059 -22180592 + L1_Mur2 LINE L1 4485 4730 -1147 1 1142 1035 282 94 104 chr17 73092059 73092932 -22179719 + L1MA4 LINE L1 5156 6012 -930 1 1142 650 244 82 15 chr17 73092932 73093128 -22179523 - B3 SINE B2 -7 209 1 1 1142 1164 253 94 34 chr17 73093128 73093664 -22178987 + L1MA4 LINE L1 6013 6580 -362 1 1142 916 259 73 24 chr17 73093774 73094063 -22178588 + MT2A LTR ERVL 231 533 0 1 1142 239 321 51 62 chr17 73094164 73094340 -22178311 + L1ME3A LINE L1 5795 5968 -205 1 1142 393 167 0 0 chr17 73094355 73094433 -22178218 + CT-rich Low_complexity Low_complexity 2 79 0 1 1142 474 33 0 0 chr17 73095018 73095078 -22177573 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 1142 445 298 21 21 chr17 73096755 73096899 -22175752 - L2a LINE L2 -3 3423 3280 1 1142 15379 44 1 0 chr17 73097212 73099752 -22172899 - L1Md_F3 LINE L1 -15 6569 4028 1 1142 203 318 15 0 chr17 73099810 73099876 -22172775 - MIR SINE MIR -105 103 37 1 1142 648 345 52 4 chr17 73099979 73100140 -22172511 - B4A SINE B4 -11 281 108 1 1142 198 0 0 0 chr17 73100140 73100162 -22172489 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 1142 462 18 0 0 chr17 73100162 73100216 -22172435 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1142 648 345 52 4 chr17 73100216 73100321 -22172330 - B4A SINE B4 -185 107 3 1 1142 21 0 0 0 chr17 73102763 73102784 -22169867 + AT_rich Low_complexity Low_complexity 1 21 0 1 1142 770 214 14 0 chr17 73103575 73103715 -22168936 + B1_Mur1 SINE Alu 2 143 -6 1 1142 423 0 0 0 chr17 73103751 73103798 -22168853 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1142 640 237 143 39 chr17 73104557 73104816 -22167835 + B4A SINE B4 2 287 -5 1 1142 372 154 0 0 chr17 73104905 73104970 -22167681 + B1_Mur2 SINE Alu 79 143 -6 1 1142 423 0 0 0 chr17 73105053 73105100 -22167551 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 1142 3137 45 3 0 chr17 73105365 73105742 -22166909 + L1_Mus1 LINE L1 6190 6567 0 1 1142 207 0 0 0 chr17 73106155 73106178 -22166473 + (GTTTG)n Simple_repeat Simple_repeat 5 27 0 1 1142 641 250 28 0 chr17 73106206 73106350 -22166301 - B1_Mur2 SINE Alu 0 149 2 1 1142 449 246 124 39 chr17 73106385 73106563 -22166088 - L1ME1 LINE L1 -196 5983 5791 1 1142 331 328 0 42 chr17 73106577 73106695 -22165956 - RSINE1 SINE B4 -52 113 1 1 1142 787 246 103 14 chr17 73106700 73107050 -22165601 - L1M4 LINE L1 -2972 3174 2794 1 1142 813 247 11 5 chr17 73107237 73107428 -22165223 + B3 SINE B2 5 196 -20 1 1142 871 237 30 5 chr17 73108245 73108444 -22164207 - B3 SINE B2 -6 210 7 1 1142 253 248 291 8 chr17 73110689 73110823 -22161828 - MER5B DNA MER1_type 0 178 7 1 1142 248 314 0 24 chr17 73111540 73111651 -22161000 + MIRb SINE MIR 134 245 -23 1 1142 21 57 0 0 chr17 73112312 73112347 -22160304 + AT_rich Low_complexity Low_complexity 1 35 0 1 1142 223 96 77 0 chr17 73113168 73113220 -22159431 + (TTG)n Simple_repeat Simple_repeat 2 57 0 1 1142 558 0 0 0 chr17 73113234 73113296 -22159355 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 1 1142 448 326 133 68 chr17 73113490 73113904 -22158747 + LTR16A1 LTR ERVL 16 456 0 1 1142 523 302 159 33 chr17 73114743 73115201 -22157450 - RMER20A LTR ERVK 0 516 1 1 1142 637 268 0 7 chr17 73115490 73115629 -22157022 - ID_B1 SINE B4 -6 218 81 1 1142 525 302 14 86 chr17 73115737 73115958 -22156693 + B4A SINE B4 88 292 0 1 1142 237 65 0 0 chr17 73115967 73115998 -22156653 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1142 194 336 98 0 chr17 73116575 73116718 -22155933 + MIRc SINE MIR 82 238 -30 1 1142 703 303 134 19 chr17 73118052 73118628 -22154023 - L1M5 LINE L1 -1760 4386 3745 1 1142 242 322 24 95 chr17 73118696 73118864 -22153787 + MIRb SINE MIR 98 253 -15 1 1142 207 0 0 0 chr17 73119242 73119265 -22153386 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1142 875 224 29 14 chr17 73119271 73119479 -22153172 + B3 SINE B2 6 216 0 1 1142 725 199 6 76 chr17 73119484 73119642 -22153009 + B1_Mur3 SINE Alu 3 149 0 1 1142 31905 98 9 20 chr17 73119714 73121604 -22151047 + L1_Mus3 LINE L1 217 2075 -3808 1 1142 1230 35 0 0 chr17 73121604 73121747 -22150904 + B1_Mm SINE Alu 3 145 -2 1 1142 31905 102 9 10 chr17 73121747 73122859 -22149792 + L1_Mus3 LINE L1 2076 3181 -2702 1 1142 278 26 26 0 chr17 73122859 73122898 -22149753 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 1 1142 31905 96 9 7 chr17 73122898 73126346 -22146305 + L1_Mus3 LINE L1 3182 6638 0 1 1142 600 120 80 0 chr17 73126703 73126803 -22145848 + B1_Mus1 SINE Alu 5 112 -36 1 1142 23 0 0 0 chr17 73127574 73127597 -22145054 + AT_rich Low_complexity Low_complexity 1 23 0 1 1142 936 27 0 0 chr17 73127743 73127854 -22144797 + (GAAA)n Simple_repeat Simple_repeat 3 113 0 1 1142 507 33 0 0 chr17 73127854 73127915 -22144736 + (GGGA)n Simple_repeat Simple_repeat 1 61 0 1 1142 432 0 0 0 chr17 73127955 73128003 -22144648 + (GA)n Simple_repeat Simple_repeat 2 49 0 1 1142 263 324 0 27 chr17 73129408 73129519 -22143132 + L1ME1 LINE L1 5866 5973 -206 1 1142 1845 157 122 11 chr17 73129674 73130042 -22142609 - MTC LTR MaLR -2 419 11 1 1142 652 309 65 82 chr17 73130066 73130479 -22142172 - MLT2B3 LTR ERVL -148 406 1 1 1142 22 35 0 0 chr17 73131161 73131190 -22141461 + AT_rich Low_complexity Low_complexity 1 29 0 1 1142 311 165 279 0 chr17 73132639 73132718 -22139933 - PB1D10 SINE Alu -5 112 12 1 1142 660 67 0 0 chr17 73133228 73133318 -22139333 + (TG)n Simple_repeat Simple_repeat 2 91 0 1 1142 394 268 182 4 chr17 73133500 73133747 -22138904 + L1MEd LINE L1 464 754 -5382 2 1142 402 190 154 8 chr17 73134375 73134492 -22138159 + B1_Mur2 SINE Alu 16 149 0 2 1142 35 0 0 0 chr17 73134495 73134530 -22138121 + AT_rich Low_complexity Low_complexity 1 35 0 2 1142 319 330 75 30 chr17 73134642 73134842 -22137809 + B4A SINE B4 2 210 -82 2 1142 261 279 43 75 chr17 73134878 73134971 -22137680 + RSINE1 SINE B4 70 159 -6 2 1142 1519 256 36 13 chr17 73135082 73135470 -22137181 - Lx6 LINE L1 -28 7432 7036 2 1142 275 222 0 0 chr17 73135886 73135949 -22136702 + L1MEd LINE L1 689 751 -5491 2 1142 938 261 296 0 chr17 73136196 73136591 -22136060 + Lx8 LINE L1 6959 7470 -3 2 1142 331 202 51 68 chr17 73136740 73136857 -22135794 - Lx8 LINE L1 0 7473 7359 2 1142 493 267 53 0 chr17 73136871 73137002 -22135649 - B1F SINE Alu -11 138 1 2 1142 233 304 0 55 chr17 73137025 73137098 -22135553 - ID4_ SINE ID -13 70 2 2 1142 412 308 137 17 chr17 73137450 73137691 -22134960 + LTR50 LTR ERVL 48 317 -478 2 1142 858 164 131 11 chr17 73137769 73137960 -22134691 + URR1A DNA MER1_type 13 226 0 2 142 228 268 125 103 chr17 73138142 73138462 -22134189 + RMER17C LTR ERVK 15 341 -69 2 1143 652 208 133 67 chr17 73138591 73138771 -22133880 - B3A SINE B2 -6 192 1 2 1143 23 0 0 0 chr17 73138911 73138934 -22133717 + AT_rich Low_complexity Low_complexity 1 23 0 2 1143 333 219 14 0 chr17 73138942 73139015 -22133636 - ID_B1 SINE B4 -5 219 146 2 1143 297 264 58 0 chr17 73139155 73139242 -22133409 - B3A SINE B2 -106 92 1 2 1143 565 297 0 0 chr17 73139243 73139371 -22133280 - ID_B1 SINE B4 -79 145 18 2 1143 529 303 98 95 chr17 73139404 73139824 -22132827 + L1MEd LINE L1 4526 4946 -1200 2 1143 335 183 53 32 chr17 73139829 73139916 -22132735 - PB1D10 SINE Alu -16 133 43 2 1143 206 118 0 0 chr17 73139983 73140017 -22132634 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 2 1143 186 43 0 0 chr17 73140034 73140057 -22132594 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 2 1143 238 208 0 0 chr17 73140063 73140116 -22132535 - Lx8 LINE L1 -642 6831 6779 2 1143 463 357 99 17 chr17 73140425 73141001 -22131650 + L1M5 LINE L1 2221 2843 -3303 2 1143 691 237 32 0 chr17 73141880 73142036 -22130615 + B3A SINE B2 2 162 -36 2 1143 333 0 0 0 chr17 73142037 73142074 -22130577 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 1143 441 393 75 0 chr17 73142091 73142409 -22130242 - L2 LINE L2 -471 2948 2607 2 1143 348 182 43 64 chr17 73142432 73142526 -22130125 + B1F SINE Alu 41 132 -17 2 1143 225 0 0 0 chr17 73142530 73142555 -22130096 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 2 1143 393 225 12 0 chr17 73142555 73142635 -22130016 + ID4_ SINE ID 1 81 -2 2 1143 271 324 14 0 chr17 73142670 73142741 -22129910 + B4A SINE B4 13 84 -208 2 1143 324 0 0 0 chr17 73142743 73142779 -22129872 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 1143 468 0 0 0 chr17 73143586 73143638 -22129013 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 2 1143 937 171 166 0 chr17 73143650 73143843 -22128808 + URR1B DNA MER1_type 1 225 0 2 1143 217 111 13 65 chr17 73143872 73143949 -22128702 + (CCCA)n Simple_repeat Simple_repeat 2 74 0 2 1143 532 320 26 0 chr17 73145151 73145304 -22127347 + ID_B1 SINE B4 1 157 -67 2 1143 946 222 48 126 chr17 73145304 73145590 -22127061 + B4A SINE B4 2 269 -23 2 1143 321 89 0 0 chr17 73145590 73145635 -22127016 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1143 946 222 48 126 chr17 73145635 73145657 -22126994 + B4A SINE B4 270 286 -6 2 1143 534 154 37 28 chr17 73145700 73145807 -22126844 - B1_Mur3 SINE Alu 0 149 42 2 1143 301 170 0 0 chr17 73145877 73145930 -22126721 - B1_Mus2 SINE Alu -92 55 3 2 1143 968 204 34 5 chr17 73145957 73146164 -22126487 - B3 SINE B2 0 216 4 2 1143 314 257 0 14 chr17 73146185 73146256 -22126395 + ID_B1 SINE B4 141 210 -14 2 1143 213 39 0 0 chr17 73146256 73146282 -22126369 + (TAAAA)n Simple_repeat Simple_repeat 1 26 0 2 1143 635 84 11 0 chr17 73146427 73146522 -22126129 + (TC)n Simple_repeat Simple_repeat 1 96 0 2 1143 259 221 0 113 chr17 73146572 73146587 -22126064 + MT2B2 LTR ERVL 155 158 -426 2 1143 468 254 7 15 chr17 73146587 73146713 -22125938 + B1_Mur1 SINE Alu 3 129 -20 2 1143 261 0 0 0 chr17 73146713 73146742 -22125909 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 2 1143 189 365 106 0 chr17 73146762 73146866 -22125785 + MIRb SINE MIR 77 191 -77 2 1143 184 261 20 25 chr17 73147074 73147192 -22125459 - MIRc SINE MIR -136 132 16 2 1143 602 275 6 48 chr17 73147654 73147822 -22124829 + RSINE1 SINE B4 3 163 -2 2 1143 1429 71 6 0 chr17 73147860 73148043 -22124608 - B2_Mm1t SINE B2 -8 185 2 2 1143 259 315 0 11 chr17 73148125 73148215 -22124436 - MTEa LTR MaLR -37 342 254 2 1143 346 222 110 9 chr17 73148235 73148344 -22124307 + L1MDa LINE L1 56 175 -6458 2 1143 278 231 33 8 chr17 73148421 73148543 -22124108 + (CATA)n Simple_repeat Simple_repeat 2 126 0 2 1143 614 109 26 79 chr17 73148519 73148709 -22123942 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 2 1143 209 250 46 35 chr17 73148716 73148803 -22123848 + (TATATG)n Simple_repeat Simple_repeat 3 90 0 2 1143 362 374 11 43 chr17 73149272 73149459 -22123192 + L1MDa LINE L1 857 1037 -5596 2 1143 1725 137 38 92 chr17 73149476 73149846 -22122805 - ORR1B1 LTR MaLR -3 391 42 2 1143 21 0 0 0 chr17 73149860 73149881 -22122770 + AT_rich Low_complexity Low_complexity 1 21 0 2 1143 686 178 35 4 chr17 73149885 73150033 -22122618 - ORR1D1 LTR MaLR 0 374 164 2 1143 384 252 225 14 chr17 73150069 73150290 -22122361 - B4A SINE B4 -23 269 3 2 1143 1634 73 7 145 chr17 73150391 73150619 -22122032 - L1_Mus1 LINE L1 0 6567 6361 2 1143 252 0 0 0 chr17 73150619 73150647 -22122004 + (TA)n Simple_repeat Simple_repeat 1 28 0 2 1143 1634 73 7 145 chr17 73150647 73150707 -22121944 - L1_Mus1 LINE L1 -207 6360 6319 2 1143 285 297 0 0 chr17 73150717 73150791 -22121860 - PB1D10 SINE Alu -43 74 1 2 1143 1211 262 98 28 chr17 73150829 73151300 -22121351 + L1MDa LINE L1 2069 2572 -4061 2 1143 269 252 33 8 chr17 73151361 73151456 -22121195 + L1MA8 LINE L1 6170 6270 -21 2 1143 498 290 0 21 chr17 73151516 73151657 -22120994 + ID_B1 SINE B4 84 221 -3 2 1143 272 250 14 0 chr17 73151828 73151900 -22120751 + L1MDa LINE L1 2725 2797 -3740 2 1143 421 324 47 54 chr17 73151906 73152203 -22120448 - MTEa LTR MaLR -13 366 72 2 1143 621 293 23 6 chr17 73152257 73152432 -22120219 + B3A SINE B2 3 180 -18 2 1143 4225 56 2 0 chr17 73152500 73153015 -22119636 + L1Md_F2 LINE L1 6061 6576 -6 2 1143 473 232 35 9 chr17 73153143 73153256 -22119395 - RSINE1 SINE B4 -21 144 29 2 1143 2994 38 0 0 chr17 73153623 73153969 -22118682 + ORR1A0 LTR MaLR 1 346 0 2 1143 349 307 0 21 chr17 73153977 73154117 -22118534 + B1F SINE Alu 2 138 -11 2 1143 260 186 0 17 chr17 73154132 73154192 -22118459 + GA-rich Low_complexity Low_complexity 3 61 0 2 1143 421 298 201 5 chr17 73154827 73155047 -22117604 - RMER15 LTR ERVL -14 561 299 2 1143 238 274 115 104 chr17 73155040 73155223 -22117428 - RMER15 LTR ERVL -390 185 1 2 1143 1145 88 0 0 chr17 73156054 73156201 -22116450 + B1_Mus2 SINE Alu 1 147 0 2 1143 651 112 0 0 chr17 73156209 73156307 -22116344 + (GAA)n Simple_repeat Simple_repeat 2 99 0 2 1143 310 279 0 23 chr17 73156364 73156452 -22116199 + ID SINE ID 1 86 -138 2 1143 567 265 15 0 chr17 73156671 73156803 -22115848 + B1F SINE Alu 13 146 -3 2 1143 219 274 0 0 chr17 73156806 73156857 -22115794 + GA-rich Low_complexity Low_complexity 2 52 0 2 1143 588 310 0 70 chr17 73157893 73158094 -22114557 + B3A SINE B2 8 194 -4 2 1143 452 372 0 30 chr17 73158130 73158299 -22114352 + RSINE1 SINE B4 2 165 0 2 1143 1031 244 122 12 chr17 73158342 73158670 -22113981 - MTD LTR MaLR -14 405 42 2 1143 189 0 0 0 chr17 73159467 73159488 -22113163 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1143 1376 78 0 77 chr17 73159936 73160095 -22112556 + B2_Mm1t SINE B2 2 160 -33 2 1143 249 33 0 0 chr17 73160095 73160125 -22112526 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 2 1143 1376 78 0 77 chr17 73160125 73160173 -22112478 + B2_Mm1t SINE B2 161 193 0 2 1143 2798 114 42 5 chr17 73160488 73160894 -22111757 + MTC LTR MaLR 1 421 0 2 1143 273 98 0 0 chr17 73161163 73161204 -22111447 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1143 560 296 0 7 chr17 73161207 73161350 -22111301 - RSINE1 SINE B4 -7 158 17 2 1143 215 318 0 15 chr17 73161432 73161499 -22111152 - MIRb SINE MIR -33 235 170 2 1143 482 233 78 0 chr17 73161616 73161745 -22110906 - B1F SINE Alu -7 142 4 2 1143 318 304 0 0 chr17 73161788 73161867 -22110784 - ID4 SINE ID 0 83 5 2 1143 770 257 26 0 chr17 73161956 73162108 -22110543 + B3A SINE B2 1 156 -42 2 1143 372 135 0 0 chr17 73162110 73162184 -22110467 + (TC)n Simple_repeat Simple_repeat 2 75 0 2 1143 650 200 0 0 chr17 73162243 73162353 -22110298 + B1_Mur1 SINE Alu 33 142 -7 2 1143 615 115 197 39 chr17 73162646 73162773 -22109878 - B1_Mur3 SINE Alu -2 147 1 2 1143 564 175 48 0 chr17 73163935 73164038 -22108613 + B3 SINE B2 1 108 -108 2 1143 331 160 368 0 chr17 73164036 73164142 -22108509 + RSINE1 SINE B4 12 156 -9 2 1143 492 286 29 35 chr17 73164592 73164681 -22107970 + B4A SINE B4 1 88 -204 2 1143 213 304 48 29 chr17 73164681 73164786 -22107865 + B1F2 SINE Alu 1 107 -42 2 1143 5545 42 1 0 chr17 73165022 73165683 -22106968 + L1Md_F2 LINE L1 5921 6582 0 2 1143 1173 62 0 14 chr17 73166002 73166150 -22106501 + B1_Mus2 SINE Alu 1 146 -1 2 1143 432 320 150 38 chr17 73166384 73166725 -22105926 - MTEa LTR MaLR 0 379 1 2 1143 239 279 16 16 chr17 73167616 73167678 -22104973 - PB1D7 SINE Alu -22 98 37 2 1143 435 285 36 14 chr17 73168174 73168313 -22104338 + B3A SINE B2 1 142 -56 2 1143 1233 101 0 0 chr17 73168320 73168647 -22104004 + (CA)n Simple_repeat Simple_repeat 1 327 0 3 1143 354 224 26 0 chr17 73168775 73168851 -22103800 + ID4 SINE ID 2 79 -4 3 1143 525 267 122 15 chr17 73169614 73169819 -22102832 + L1MD LINE L1 2352 2578 -3568 3 1143 321 290 10 20 chr17 73169825 73169927 -22102724 + B3 SINE B2 3 103 -113 3 1143 3913 114 20 29 chr17 73169933 73170546 -22102105 + Lx4A LINE L1 6450 7056 -2 3 1143 795 90 0 0 chr17 73170673 73170795 -22101856 + (CA)n Simple_repeat Simple_repeat 1 122 0 3 1143 218 29 59 0 chr17 73170799 73170833 -22101818 + (CAGAGA)n Simple_repeat Simple_repeat 5 40 0 3 1143 853 283 124 84 chr17 73170863 73171812 -22100839 + L1MD LINE L1 2762 3748 -2398 3 1143 293 292 59 27 chr17 73171814 73172055 -22100596 + B4A SINE B4 3 287 -5 3 1143 549 240 0 23 chr17 73172136 73172264 -22100387 + RSINE1 SINE B4 3 127 -38 3 1143 396 250 18 36 chr17 73172266 73172378 -22100273 + L1MD LINE L1 3775 3884 -2262 3 1143 843 223 77 10 chr17 73172440 73172635 -22100016 + B3 SINE B2 1 208 -8 3 1143 979 115 0 20 chr17 73172776 73172927 -22099724 - B1_Mus1 SINE Alu 0 148 1 3 1143 755 209 0 26 chr17 73172936 73173088 -22099563 - B1_Mus1 SINE Alu 0 148 1 3 1143 2837 58 6 8 chr17 73173155 73173519 -22099132 - L1_Mus1 LINE L1 -1 6566 6204 3 1143 387 310 20 52 chr17 73173544 73173697 -22098954 - ID_B1 SINE B4 -7 217 70 3 1143 421 310 14 21 chr17 73173749 73173894 -22098757 - ID_B1 SINE B4 0 224 81 3 1143 334 157 26 91 chr17 73174086 73174163 -22098488 - ID4_ SINE ID -10 73 2 3 1143 210 143 26 13 chr17 73174173 73174251 -22098400 + T-rich Low_complexity Low_complexity 2 80 0 3 1143 1207 61 0 0 chr17 73174258 73174405 -22098246 - B1_Mus2 SINE Alu 0 147 1 3 1143 318 220 136 29 chr17 73174408 73174511 -22098140 - PB1D10 SINE Alu -1 116 3 3 1143 389 202 49 114 chr17 73174542 73174665 -22097986 + PB1D10 SINE Alu 3 117 0 3 1143 449 237 60 21 chr17 73174665 73174683 -22097968 + ID_B1 SINE B4 84 247 -45 3 1143 429 250 46 9 chr17 73174780 73174889 -22097762 + PB1D10 SINE Alu 1 113 -4 3 1143 918 230 37 0 chr17 73175654 73175841 -22096810 + B3A SINE B2 4 197 -1 3 1143 284 345 117 0 chr17 73176229 73176426 -22096225 + LTR16B2 LTR ERVL 243 462 0 3 1143 437 234 0 0 chr17 73176772 73176849 -22095802 + B1_Mur4 SINE Alu 23 99 -51 3 1143 554 177 53 0 chr17 73177569 73177682 -22094969 - B1_Mur2 SINE Alu -26 123 5 3 1143 324 325 25 25 chr17 73177705 73177825 -22094826 - PB1D7 SINE Alu 0 120 1 3 1143 315 65 0 0 chr17 73177946 73177992 -22094659 + (GA)n Simple_repeat Simple_repeat 2 47 0 3 1143 214 256 0 0 chr17 73178067 73178110 -22094541 + polypurine Low_complexity Low_complexity 3 45 0 3 1143 219 313 15 15 chr17 73178868 73178936 -22093715 - B1_Mus1 SINE Alu -51 97 30 3 1143 247 206 29 14 chr17 73178968 73179037 -22093614 + (TA)n Simple_repeat Simple_repeat 1 70 0 3 1143 758 200 140 22 chr17 73179732 73179911 -22092740 + B3 SINE B2 14 213 -3 3 1143 22 35 0 0 chr17 73179912 73179941 -22092710 + AT_rich Low_complexity Low_complexity 1 29 0 3 1143 378 0 0 0 chr17 73180075 73180117 -22092534 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1143 212 261 211 32 chr17 73180618 73180713 -22091938 - PB1D10 SINE Alu -1 116 5 3 1143 988 149 0 26 chr17 73181292 73181444 -22091207 - B1_Mur4 SINE Alu -2 148 1 3 1143 300 200 200 0 chr17 73181836 73181916 -22090735 + MLT1A0 LTR MaLR 54 149 -216 3 1143 243 314 40 24 chr17 73181951 73182075 -22090576 + MLT1A0 LTR MaLR 230 355 -35 3 1143 200 34 0 33 chr17 73182218 73182248 -22090403 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 3 1143 404 37 19 0 chr17 73183028 73183082 -22089569 + (TTTTG)n Simple_repeat Simple_repeat 1 55 0 3 1143 867 126 14 36 chr17 73183082 73183222 -22089429 - B1_Mur4 SINE Alu -13 137 1 3 1143 379 154 189 19 chr17 73183299 73183405 -22089246 - RMER1B Other Other -1 1065 942 3 1143 583 307 6 18 chr17 73183856 73184025 -22088626 + B3A SINE B2 2 168 -30 3 1143 198 0 0 0 chr17 73184032 73184054 -22088597 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 1143 294 123 175 0 chr17 73184671 73184728 -22087923 - B1_Mus2 SINE Alu 0 147 81 3 1143 24 32 0 0 chr17 73184875 73184906 -22087745 + AT_rich Low_complexity Low_complexity 1 31 0 3 1143 939 61 98 0 chr17 73185123 73185255 -22087396 + B1_Mus2 SINE Alu 2 146 -1 3 1143 203 105 53 0 chr17 73185255 73185293 -22087358 + (CAGAGA)n Simple_repeat Simple_repeat 3 42 0 3 1143 219 286 9 45 chr17 73185819 73185929 -22086722 + (CGGGG)n Simple_repeat Simple_repeat 5 110 0 3 1143 26 30 0 0 chr17 73186308 73186341 -22086310 + GC_rich Low_complexity Low_complexity 1 33 0 3 1143 29 28 0 0 chr17 73186360 73186396 -22086255 + GC_rich Low_complexity Low_complexity 1 36 0 3 1143 28 29 0 0 chr17 73186442 73186477 -22086174 + GC_rich Low_complexity Low_complexity 1 35 0 3 1143 35 83 0 24 chr17 73186533 73186657 -22085994 + GC_rich Low_complexity Low_complexity 1 121 0 3 1143 24 0 0 0 chr17 73186843 73186867 -22085784 + GC_rich Low_complexity Low_complexity 1 24 0 3 1143 297 0 0 0 chr17 73187350 73187383 -22085268 + (T)n Simple_repeat Simple_repeat 1 33 0 3 1143 225 231 62 0 chr17 73188050 73188115 -22084536 + RSINE1 SINE B4 59 127 -38 3 1143 357 253 13 0 chr17 73188803 73188882 -22083769 + ID4 SINE ID 2 81 -2 3 1143 188 254 266 23 chr17 73189694 73189871 -22082780 - MIR SINE MIR -11 251 32 3 1143 235 288 68 0 chr17 73190029 73190102 -22082549 - B1F SINE Alu -67 82 5 3 1143 1054 29 7 0 chr17 73190252 73190392 -22082259 - B1_Mm SINE Alu -1 146 6 3 1143 225 286 120 20 chr17 73190509 73190609 -22082042 - MER58B DNA MER1_type -231 110 1 3 1143 924 198 32 0 chr17 73190624 73190811 -22081840 - B3 SINE B2 -10 206 14 3 1143 21 0 0 0 chr17 73190998 73191019 -22081632 + AT_rich Low_complexity Low_complexity 1 21 0 3 1143 407 274 227 5 chr17 73192719 73192935 -22079716 - MLT1A0 LTR MaLR -101 264 1 3 1143 279 272 191 113 chr17 73193857 73193998 -22078653 - B3A SINE B2 -16 182 31 3 1143 1088 74 0 13 chr17 73193998 73194148 -22078503 + B1_Mus1 SINE Alu 1 148 0 3 1143 1164 62 0 14 chr17 73194241 73194389 -22078262 - B1_Mus1 SINE Alu 0 148 3 3 1143 209 136 32 63 chr17 73194877 73194927 -22077724 + T-rich Low_complexity Low_complexity 13 62 0 3 1143 343 211 39 26 chr17 73194927 73195005 -22077646 - ID4 SINE ID -3 80 2 3 1143 209 136 32 63 chr17 73195005 73195017 -22077634 + T-rich Low_complexity Low_complexity 2 12 0 3 1143 520 226 15 59 chr17 73195176 73195312 -22077339 - B3 SINE B2 -86 130 1 3 1143 186 43 0 0 chr17 73195958 73195981 -22076670 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3 1143 413 259 19 101 chr17 73196040 73196199 -22076452 + B1F SINE Alu 2 147 -2 3 1143 842 153 15 0 chr17 73196598 73196735 -22075916 - B1_Mur4 SINE Alu -10 140 2 3 1143 212 171 0 0 chr17 73197383 73197418 -22075233 + B3 SINE B2 1 35 -181 3 1143 346 260 36 63 chr17 73197471 73197582 -22075069 - B1F SINE Alu -9 140 33 3 1143 278 211 77 87 chr17 73197703 73197807 -22074844 - PB1D9 SINE Alu -1 119 17 3 1143 192 77 0 0 chr17 73198280 73198306 -22074345 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1143 532 204 47 47 chr17 73199854 73200003 -22072648 - B1F2 SINE Alu 0 149 1 3 1143 374 233 38 19 chr17 73200364 73200469 -22072182 + B3A SINE B2 57 163 -35 3 1143 217 276 171 0 chr17 73200584 73200660 -22071991 + PB1D7 SINE Alu 5 93 -27 3 1143 24 53 0 0 chr17 73200825 73200863 -22071788 + AT_rich Low_complexity Low_complexity 1 38 0 3 1143 403 280 85 0 chr17 73200872 73200990 -22071661 - RSINE1 SINE B4 -34 131 4 3 1143 347 290 80 0 chr17 73201226 73201326 -22071325 + B4A SINE B4 4 111 -181 3 1143 437 201 9 86 chr17 73201712 73201838 -22070813 + PB1D7 SINE Alu 3 119 -1 3 1143 292 165 87 141 chr17 73201838 73201930 -22070721 - RSINE1 SINE B4 -1 164 78 3 1143 236 347 17 85 chr17 73201920 73202156 -22070495 - B4A SINE B4 -62 230 11 3 1143 1721 132 35 78 chr17 73202376 73202720 -22069931 + ORR1A4 LTR MaLR 1 329 0 3 1143 454 310 53 42 chr17 73202862 73203179 -22069472 + MTEa LTR MaLR 57 378 -1 3 1143 521 191 87 0 chr17 73203319 73203434 -22069217 + B1_Mur2 SINE Alu 25 149 0 3 1143 1193 61 0 0 chr17 73204112 73204260 -22068391 + B1_Mus1 SINE Alu 1 148 0 3 1143 227 160 40 0 chr17 73204260 73204310 -22068341 + A-rich Low_complexity Low_complexity 5 56 0 3 1143 658 250 49 20 chr17 73204755 73204959 -22067692 - B3 SINE B2 -6 210 1 3 1143 2554 148 13 7 chr17 73205771 73206220 -22066431 - RLTR11A LTR ERVK -46 482 31 3 1143 333 0 0 0 chr17 73206233 73206270 -22066381 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1143 395 148 26 0 chr17 73206271 73206351 -22066300 + RLTR11A LTR ERVK 441 528 0 3 1143 289 221 64 13 chr17 73206767 73206845 -22065806 + MER5B DNA MER1_type 3 84 -94 3 1143 822 264 50 21 chr17 73207173 73207455 -22065196 - B4A SINE B4 0 292 3 3 1143 232 136 224 15 chr17 73207464 73207531 -22065120 - MLT1A0 LTR MaLR -220 145 65 3 1143 249 256 233 0 chr17 73209204 73209294 -22063357 - PB1D10 SINE Alu -6 111 1 3 1143 50 18 0 0 chr17 73209406 73209463 -22063188 + AT_rich Low_complexity Low_complexity 1 57 0 3 1143 974 145 6 6 chr17 73209515 73209675 -22062976 - B2_Mm2 SINE B2 -35 160 1 4 1143 209 312 73 24 chr17 73210260 73210342 -22062309 + MIR SINE MIR 7 92 -170 4 1143 344 274 65 95 chr17 73210788 73210957 -22061694 + MIRc SINE MIR 39 202 -66 4 1143 388 334 39 0 chr17 73211509 73211668 -22060983 + MIR SINE MIR 90 260 -8 4 1143 353 206 66 0 chr17 73212260 73212348 -22060303 + L1M5 LINE L1 5737 5829 -2053 4 1143 376 307 54 27 chr17 73213204 73213388 -22059263 - MLT1A LTR MaLR -27 347 159 4 1143 540 316 199 21 chr17 73213864 73214028 -22058623 - MLT1G3 LTR MaLR -21 574 394 4 1143 1310 182 0 22 chr17 73214028 73214224 -22058427 - URR1B DNA MER1_type 0 225 34 4 1143 342 0 0 0 chr17 73214224 73214262 -22058389 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1143 1310 182 0 22 chr17 73214262 73214295 -22058356 - URR1B DNA MER1_type -192 33 1 4 1143 540 316 199 21 chr17 73214295 73214566 -22058085 - MLT1G3 LTR MaLR -202 393 61 4 1143 381 271 16 54 chr17 73214588 73214717 -22057934 + ID_B1 SINE B4 92 215 -9 4 1143 851 183 0 0 chr17 73215109 73215251 -22057400 + B1_Mur3 SINE Alu 1 142 -7 4 1143 266 253 53 0 chr17 73216050 73216220 -22056431 + (CTGTG)n Simple_repeat Simple_repeat 1 179 0 4 1143 408 232 16 43 chr17 73216153 73216338 -22056313 + (GTGTG)n Simple_repeat Simple_repeat 1 180 0 4 1143 284 200 53 29 chr17 73216384 73216554 -22056097 + (GTGTG)n Simple_repeat Simple_repeat 2 175 0 4 1143 633 254 104 5 chr17 73216924 73217126 -22055525 - MLT2C2 LTR ERVL -8 456 235 4 1143 459 308 72 46 chr17 73217146 73217299 -22055352 - RSINE1 SINE B4 -5 160 4 4 1143 482 242 157 28 chr17 73217303 73217520 -22055131 - MLT2C2 LTR ERVL -219 245 1 4 1143 759 300 45 40 chr17 73217822 73218267 -22054384 + L1ME2z LINE L1 5415 5861 -583 4 1143 989 140 6 0 chr17 73218348 73218526 -22054125 + (TTC)n Simple_repeat Simple_repeat 1 179 0 4 1143 287 141 0 40 chr17 73218526 73218600 -22054051 + CT-rich Low_complexity Low_complexity 3 73 0 4 1143 1021 181 35 35 chr17 73218639 73218868 -22053783 - MTC LTR MaLR 0 421 193 4 1143 1721 128 67 86 chr17 73218925 73219285 -22053366 + ORR1B1 LTR MaLR 42 394 0 4 1143 667 289 65 23 chr17 73219323 73219539 -22053112 - B4A SINE B4 -67 225 1 4 1143 1246 193 32 20 chr17 73219572 73219821 -22052830 + RMER1C Other Other 1091 1342 0 4 1143 213 154 0 0 chr17 73220530 73220569 -22052082 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 4 1143 839 260 44 31 chr17 73221614 73221840 -22050811 + B4A SINE B4 1 229 -63 4 1143 543 255 44 15 chr17 73221842 73222045 -22050606 + L1MC1 LINE L1 5756 5964 -369 4 1143 845 270 92 53 chr17 73222451 73222713 -22049938 + B4 SINE B4 17 288 -4 4 1143 319 286 12 0 chr17 73222975 73223059 -22049592 + MER45C DNA Tip100 81 165 -788 4 1143 449 341 97 60 chr17 73223110 73223441 -22049210 + MER45C DNA Tip100 256 598 -355 4 1143 1553 223 38 57 chr17 73223847 73224213 -22048438 + MTE2b LTR MaLR 21 379 0 4 1143 337 283 19 25 chr17 73224531 73224659 -22047992 + MLT1A0 LTR MaLR 1 131 -277 4 1143 439 281 107 7 chr17 73224701 73224841 -22047810 + MLT1A0 LTR MaLR 212 365 0 4 1143 626 336 88 43 chr17 73225185 73225583 -22047068 - MLT2F LTR ERVL -26 637 222 4 1143 360 0 0 0 chr17 73225727 73225767 -22046884 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1143 3417 30 5 2 chr17 73225827 73226222 -22046429 + MTA_Mm LTR MaLR 1 396 0 4 1143 2926 80 5 0 chr17 73226222 73226628 -22046023 + MTA_Mm-int LTR MaLR 1 398 -700 4 1143 950 227 7 107 chr17 73226630 73226901 -22045750 - B4A SINE B4 -25 267 24 4 1143 852 177 14 0 chr17 73226924 73227071 -22045580 - B1_Mur2 SINE Alu 0 149 1 4 1143 186 83 39 59 chr17 73227142 73227193 -22045458 + A-rich Low_complexity Low_complexity 1 50 0 4 1143 228 250 0 18 chr17 73227194 73227251 -22045400 - ID4_ SINE ID -25 58 3 4 1143 2127 105 3 28 chr17 73227586 73227909 -22044742 - L1_Mus1 LINE L1 -1 6566 6252 4 1143 187 156 31 0 chr17 73228881 73228913 -22043738 - MIR SINE MIR -20 242 210 4 1143 21 0 0 0 chr17 73229170 73229191 -22043460 + GC_rich Low_complexity Low_complexity 1 21 0 4 1143 1326 78 0 0 chr17 73229959 73230139 -22042512 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 4 1143 290 167 17 0 chr17 73230139 73230199 -22042452 + T-rich Low_complexity Low_complexity 5 65 0 4 1143 18565 102 12 19 chr17 73230199 73231277 -22041374 - Lx LINE L1 0 6654 5587 4 1143 449 224 233 75 chr17 73231277 73231595 -22041056 + RLTR9A LTR ERVK 1 368 0 4 1143 18565 149 201 14 chr17 73231595 73235238 -22037413 - Lx LINE L1 -296 5587 1203 4 1143 3007 126 40 16 chr17 73235243 73235334 -22037317 - L1VL4 LINE L1 -5376 926 835 4 1143 1021 105 0 0 chr17 73235334 73235467 -22037184 - B1_Mus1 SINE Alu -15 133 1 4 1143 3007 126 40 16 chr17 73235467 73235925 -22036726 - L1VL4 LINE L1 -5468 834 364 4 1143 273 222 0 0 chr17 73235929 73235992 -22036659 + CT-rich Low_complexity Low_complexity 2 64 0 4 1143 509 188 19 7 chr17 73236252 73236407 -22036244 + (CA)n Simple_repeat Simple_repeat 1 157 0 4 1143 25 31 0 0 chr17 73236455 73236487 -22036164 + AT_rich Low_complexity Low_complexity 1 32 0 4 1143 409 336 7 0 chr17 73236594 73236737 -22035914 - Lx8 LINE L1 -341 7132 6989 4 1143 1298 161 161 33 chr17 73237026 73237164 -22035487 - Lx9 LINE L1 -3 7641 7455 4 1143 930 122 0 0 chr17 73237164 73237312 -22035339 + (TA)n Simple_repeat Simple_repeat 2 149 0 4 1143 380 20 0 20 chr17 73237313 73237363 -22035288 + (GA)n Simple_repeat Simple_repeat 1 49 0 4 1143 1298 161 161 33 chr17 73237363 73237557 -22035094 - Lx9 LINE L1 -190 7454 7266 4 1143 2337 169 39 7 chr17 73237558 73237968 -22034683 + Lx9 LINE L1 6796 7218 -426 4 1143 1049 257 61 53 chr17 73237988 73238399 -22034252 - BGLII_B LTR ERVK -27 414 1 4 1143 236 245 0 0 chr17 73238399 73238452 -22034199 + Lx9 LINE L1 7222 7274 -370 4 1143 490 224 191 6 chr17 73238680 73238837 -22033814 - MTEb LTR MaLR 0 379 194 4 1143 222 107 0 51 chr17 73238843 73238902 -22033749 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 1143 352 316 49 0 chr17 73239351 73239502 -22033149 - MIRb SINE MIR -76 192 25 4 1143 243 169 0 48 chr17 73239686 73239748 -22032903 + G-rich Low_complexity Low_complexity 3 61 0 4 1143 342 0 0 0 chr17 73240360 73240398 -22032253 + (GA)n Simple_repeat Simple_repeat 1 38 0 4 1143 987 152 55 0 chr17 73240398 73240563 -22032088 - Lx LINE L1 -96 6558 6385 4 1143 1161 75 0 0 chr17 73240579 73240726 -22031925 - B1_Mus2 SINE Alu 0 147 1 4 1143 207 0 0 0 chr17 73240876 73240899 -22031752 + (TC)n Simple_repeat Simple_repeat 1 23 0 4 1143 794 144 42 21 chr17 73241008 73241150 -22031501 - B1_Mur4 SINE Alu -5 145 1 4 1143 409 280 55 27 chr17 73241157 73241267 -22031384 - PB1D7 SINE Alu -6 114 2 4 1143 251 250 17 133 chr17 73241267 73241299 -22031352 - MT2B2 LTR ERVL -430 154 137 4 1143 1506 150 0 0 chr17 73241306 73241532 -22031119 - URR1A DNA MER1_type 0 226 1 4 1143 1381 268 65 11 chr17 73241532 73242052 -22030599 - L1MB2 LINE L1 -294 5877 5326 4 1143 222 205 0 0 chr17 73242052 73242091 -22030560 + (CGTG)n Simple_repeat Simple_repeat 3 41 0 4 1143 1150 261 28 0 chr17 73242100 73242349 -22030302 - B4 SINE B4 -11 281 26 4 1143 372 264 50 47 chr17 73242437 73242678 -22029973 - L1MA4A LINE L1 -263 6037 5802 4 1143 693 302 54 38 chr17 73242704 73243103 -22029548 - L1MB2 LINE L1 -817 5329 4900 4 1143 519 186 137 5 chr17 73243116 73243314 -22029337 + Lx4B LINE L1 6747 7050 -8 4 1143 634 220 151 98 chr17 73243349 73243651 -22029000 - L1MB2 LINE L1 -1359 4781 4501 4 1143 183 42 0 0 chr17 73243651 73243675 -22028976 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 1143 634 220 151 98 chr17 73243675 73243810 -22028841 - L1MB2 LINE L1 -1640 4500 4321 4 1143 317 276 27 45 chr17 73244812 73244922 -22027729 - L1MEf LINE L1 -1488 4894 4787 4 1143 291 106 21 0 chr17 73244940 73244987 -22027664 + B3A SINE B2 10 57 -141 4 1143 510 234 42 54 chr17 73245062 73245229 -22027422 + B3A SINE B2 28 192 -6 4 1143 1275 80 74 0 chr17 73245517 73245693 -22026958 - B2_Mm2 SINE B2 -5 190 2 4 1143 207 0 0 0 chr17 73246066 73246089 -22026562 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 4 1143 983 191 33 23 chr17 73246181 73246395 -22026256 - B3 SINE B2 0 216 1 4 1143 517 191 4 58 chr17 73246456 73246585 -22026066 - B1_Mus2 SINE Alu -20 127 3 4 1143 472 308 37 43 chr17 73247223 73247386 -22025265 - RSINE1 SINE B4 -2 163 2 4 1143 540 218 45 8 chr17 73247411 73247545 -22025106 - B1F SINE Alu -10 139 1 4 1143 333 335 152 49 chr17 73247640 73248056 -22024595 - L1MEf LINE L1 -4703 1775 1273 4 1143 1206 57 0 11 chr17 73248481 73248748 -22023903 + (TCC)n Simple_repeat Simple_repeat 1 263 0 4 1143 183 80 0 0 chr17 73248754 73248779 -22023872 + (TTCTCC)n Simple_repeat Simple_repeat 3 27 0 4 1143 750 43 0 0 chr17 73249262 73249356 -22023295 + (TTCCC)n Simple_repeat Simple_repeat 3 96 0 4 1143 405 90 0 0 chr17 73249449 73249516 -22023135 + (TC)n Simple_repeat Simple_repeat 2 68 0 4 1143 315 0 0 0 chr17 73249516 73249551 -22023100 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1143 685 170 0 0 chr17 73250077 73250189 -22022462 + B1_Mur4 SINE Alu 39 150 0 4 1143 547 309 64 24 chr17 73250254 73250503 -22022148 - MIR SINE MIR -3 259 1 4 1143 413 322 123 51 chr17 73250957 73251543 -22021108 + L1M5 LINE L1 4613 5240 -906 4 1143 318 363 217 21 chr17 73251617 73251991 -22020660 + L1M5 LINE L1 5356 5802 -438 4 1143 549 279 7 22 chr17 73252311 73252450 -22020201 - B1F2 SINE Alu -6 143 7 4 1143 258 262 33 0 chr17 73252400 73252461 -22020190 - B4A SINE B4 -150 142 80 4 1143 333 373 32 26 chr17 73252532 73252686 -22019965 + MLT1I LTR MaLR 1 155 -256 4 1143 302 236 0 7 chr17 73252930 73253010 -22019641 - B1F SINE Alu -62 87 10 4 1143 355 176 44 66 chr17 73253877 73253968 -22018683 - MER5A1 DNA MER1_type -6 160 72 4 1143 242 302 43 86 chr17 73254076 73254192 -22018459 - MIRb SINE MIR -47 221 111 4 1143 271 343 113 52 chr17 73255360 73255572 -22017079 - L4 LINE RTE -363 1666 1442 4 1143 286 380 82 29 chr17 73256144 73256350 -22016301 + LTR16A LTR ERVL 160 376 -75 4 1143 245 128 21 0 chr17 73257537 73257584 -22015067 + (TCCC)n Simple_repeat Simple_repeat 3 50 0 4 1143 1181 55 7 0 chr17 73257776 73257922 -22014729 + B1_Mus1 SINE Alu 1 147 -1 4 1143 276 100 0 0 chr17 73257939 73257979 -22014672 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 4 1143 359 223 53 0 chr17 73258015 73258109 -22014542 - B1F SINE Alu -42 107 9 4 1143 795 146 219 11 chr17 73258189 73258305 -22014346 + URR1A DNA MER1_type 1 139 -87 4 1143 297 0 0 0 chr17 73258305 73258338 -22014313 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 5 1143 795 146 219 11 chr17 73258338 73258408 -22014243 + URR1A DNA MER1_type 140 225 -1 4 1143 180 0 0 0 chr17 73259696 73259716 -22012935 + (TGG)n Simple_repeat Simple_repeat 1 20 0 5 1143 224 351 167 21 chr17 73259920 73260016 -22012635 - MIRm SINE MIR -4 272 163 5 1143 952 156 156 63 chr17 73260284 73260489 -22012162 + URR1A DNA MER1_type 3 226 0 5 1143 1540 207 148 77 chr17 73261659 73262151 -22010500 - RLTR11A2 LTR ERVK 0 527 1 5 1143 405 0 0 0 chr17 73262295 73262340 -22010311 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1143 204 40 0 0 chr17 73262340 73262364 -22010287 + (CTAG)n Simple_repeat Simple_repeat 2 26 0 5 1143 344 169 130 0 chr17 73262364 73262441 -22010210 - B1_Mur2 SINE Alu -36 113 27 5 1143 451 119 308 68 chr17 73262926 73263043 -22009608 - B2_Mm1t SINE B2 0 193 49 5 1143 1202 102 28 6 chr17 73263055 73263232 -22009419 - B2_Mm2 SINE B2 -14 181 1 5 1143 263 379 28 36 chr17 73263474 73263633 -22009018 + MIRc SINE MIR 7 165 -111 5 1143 387 241 45 11 chr17 73263949 73264037 -22008614 + B1F SINE Alu 1 91 -58 5 1143 218 32 32 0 chr17 73264046 73264077 -22008574 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 5 1143 23 0 0 0 chr17 73264154 73264177 -22008474 + AT_rich Low_complexity Low_complexity 1 23 0 5 1143 263 357 94 28 chr17 73264420 73264602 -22008049 + MIR3 SINE MIR 8 193 -15 5 1143 908 116 0 88 chr17 73264739 73264846 -22007805 - B1_Mur4 SINE Alu -1 149 52 5 1143 3127 50 34 0 chr17 73264846 73265229 -22007422 - MTA_Mm LTR MaLR 0 396 1 5 1143 908 116 0 88 chr17 73265229 73265281 -22007370 - B1_Mur4 SINE Alu -99 51 4 5 1143 220 279 138 11 chr17 73265358 73265445 -22007206 + MIRm SINE MIR 54 151 -125 5 1143 252 0 0 0 chr17 73266903 73266931 -22005720 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1143 225 24 71 0 chr17 73267809 73267851 -22004800 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 5 1144 208 240 40 0 chr17 73269453 73269503 -22003148 - MIRc SINE MIR -146 122 71 5 1144 450 0 0 0 chr17 73269526 73269576 -22003075 + (TA)n Simple_repeat Simple_repeat 1 50 0 5 1144 208 214 0 0 chr17 73270428 73270470 -22002181 + C-rich Low_complexity Low_complexity 1 42 0 5 1144 320 321 67 22 chr17 73270714 73270848 -22001803 + MIRc SINE MIR 54 193 -75 5 1144 368 327 50 0 chr17 73273521 73273622 -21999029 - B1F SINE Alu -43 106 1 5 1144 847 259 6 12 chr17 73273622 73273702 -21998949 - ID SINE ID -143 81 3 5 1144 591 276 83 0 chr17 73274330 73274522 -21998129 - ID_B1 SINE B4 -15 209 2 5 1144 257 318 0 0 chr17 73276858 73276921 -21995730 - ID4_ SINE ID -5 78 16 5 1144 453 280 96 0 chr17 73276944 73277069 -21995582 - B1F SINE Alu -8 141 5 5 1144 420 278 48 37 chr17 73277540 73277727 -21994924 - L1M5 LINE L1 -354 5770 5582 5 1144 297 301 11 11 chr17 73278773 73278867 -21993784 + Charlie2a DNA MER1_type 30 123 -2738 5 1144 471 284 138 55 chr17 73279060 73279289 -21993362 + Charlie2a DNA MER1_type 2258 2507 -354 5 1144 580 234 26 40 chr17 73279289 73279440 -21993211 + B1F SINE Alu 1 149 0 5 1144 471 284 138 55 chr17 73279440 73279594 -21993057 + Charlie2a DNA MER1_type 2508 2673 -188 5 1144 368 299 0 11 chr17 73279660 73279748 -21992903 - PB1D7 SINE Alu -32 88 2 5 1144 1186 240 81 24 chr17 73280372 73280790 -21991861 - Charlie1a DNA MER1_type 0 1455 1014 5 1144 226 284 15 15 chr17 73280820 73280888 -21991763 + CT-rich Low_complexity Low_complexity 3 70 0 5 1144 556 244 0 9 chr17 73280892 73281008 -21991643 - ID_B1 SINE B4 -5 219 105 5 1144 2408 261 121 32 chr17 73281002 73281873 -21990778 - Charlie1a DNA MER1_type -465 990 43 5 1144 250 206 0 31 chr17 73283272 73283337 -21989314 + C-rich Low_complexity Low_complexity 6 68 0 5 1144 216 305 84 19 chr17 73283491 73283598 -21989053 - MIRc SINE MIR -26 242 129 5 1144 394 310 45 9 chr17 73284577 73284731 -21987920 - MER3 DNA MER1_type -206 118 1 5 1144 477 122 0 0 chr17 73286372 73286446 -21986205 + (TCC)n Simple_repeat Simple_repeat 1 74 0 5 1144 276 269 10 31 chr17 73287410 73287506 -21985145 + MIR3 SINE MIR 82 175 -33 5 1144 366 23 0 0 chr17 73288463 73288506 -21984145 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 1144 276 100 0 0 chr17 73288927 73288967 -21983684 + (T)n Simple_repeat Simple_repeat 1 40 0 5 1144 194 0 0 37 chr17 73289210 73289237 -21983414 + (CAAAA)n Simple_repeat Simple_repeat 4 29 0 5 1144 659 112 9 0 chr17 73290981 73291088 -21981563 + (TCC)n Simple_repeat Simple_repeat 3 110 0 5 1144 222 423 35 14 chr17 73291912 73292056 -21980595 - MER5B DNA MER1_type -3 175 29 5 1144 1206 274 104 32 chr17 73292953 73293695 -21978956 + L1M4 LINE L1 4194 4979 -1167 5 1144 181 340 58 32 chr17 73293831 73293981 -21978670 + MIRb SINE MIR 34 193 -75 5 1144 267 217 186 14 chr17 73294266 73294336 -21978315 + ID_B1 SINE B4 92 173 -51 5 1144 409 325 98 15 chr17 73294747 73294950 -21977701 + MIR SINE MIR 41 260 -2 5 1144 501 211 0 59 chr17 73295146 73295247 -21977404 + B4 SINE B4 1 95 -197 5 1144 809 270 96 8 chr17 73295249 73295499 -21977152 + Lx8 LINE L1 6936 7207 -266 5 1144 977 156 0 11 chr17 73295512 73295694 -21976957 + GA-rich Low_complexity Low_complexity 1 180 0 5 1144 233 365 52 0 chr17 73295751 73295866 -21976785 + B4 SINE B4 27 147 -145 5 1144 423 0 0 0 chr17 73296203 73296250 -21976401 + (TC)n Simple_repeat Simple_repeat 2 48 0 5 1144 242 319 16 110 chr17 73296845 73296972 -21975679 - MER63B DNA AcHobo 0 436 322 5 1144 222 37 0 0 chr17 73297068 73297095 -21975556 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1144 1064 222 45 33 chr17 73298056 73298293 -21974358 + B4A SINE B4 2 242 -50 5 1144 459 0 0 0 chr17 73298293 73298344 -21974307 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1144 906 355 54 41 chr17 73298793 73299234 -21973417 + Charlie4a DNA MER1_type 48 494 -14 5 1144 210 91 0 0 chr17 73299236 73299269 -21973382 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 5 1144 2147 89 47 50 chr17 73299670 73299990 -21972661 - ORR1A2 LTR MaLR -8 319 1 5 1144 293 299 193 37 chr17 73300009 73300304 -21972347 + RMER15 LTR ERVL 190 530 -45 5 1144 227 276 77 44 chr17 73301109 73301200 -21971451 - MIR3 SINE MIR -105 103 10 5 1144 445 261 34 68 chr17 73301486 73301634 -21971017 - MER5A1 DNA MER1_type -23 143 1 5 1144 866 17 33 0 chr17 73302903 73303023 -21969628 + (TG)n Simple_repeat Simple_repeat 2 125 0 5 1144 790 264 47 0 chr17 73303394 73303587 -21969064 + MLT2B1 LTR ERVL 1 202 -318 5 1144 391 231 77 0 chr17 73303585 73303676 -21968975 + MLT2B1 LTR ERVL 395 492 -70 5 1144 423 0 0 0 chr17 73303676 73303723 -21968928 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1144 969 271 0 17 chr17 73304177 73304413 -21968238 - MER2 DNA MER2_type -28 317 86 5 1144 686 255 167 39 chr17 73305423 73305680 -21966971 + B4A SINE B4 2 291 -1 5 1144 381 43 0 0 chr17 73305691 73305738 -21966913 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 1144 559 237 290 17 chr17 73306716 73307130 -21965521 - L1MB4 LINE L1 0 6180 5655 5 1144 239 292 96 17 chr17 73307306 73307421 -21965230 + L2 LINE L2 2347 2470 -949 5 1144 659 192 6 0 chr17 73307471 73307648 -21965003 + (TG)n Simple_repeat Simple_repeat 2 179 0 5 1144 840 159 0 0 chr17 73307659 73307835 -21964816 + (TG)n Simple_repeat Simple_repeat 1 176 0 5 1144 286 361 0 10 chr17 73307937 73308035 -21964616 + CT-rich Low_complexity Low_complexity 3 99 0 5 1144 1017 134 82 16 chr17 73309073 73309255 -21963396 - URR1A DNA MER1_type 0 226 33 5 1144 953 169 152 10 chr17 73310221 73310418 -21962233 + URR1B DNA MER1_type 1 225 0 5 1144 1162 164 31 57 chr17 73311987 73312214 -21960437 + URR1B DNA MER1_type 5 225 0 5 1144 513 333 84 61 chr17 73312338 73312683 -21959968 - L1MEc LINE L1 -3938 2462 2110 5 1144 259 242 253 0 chr17 73312723 73312818 -21959833 + MTD LTR MaLR 1 119 -302 5 1144 231 213 21 0 chr17 73312821 73312868 -21959783 + CT-rich Low_complexity Low_complexity 4 51 0 5 1144 1020 226 9 9 chr17 73312881 73313091 -21959560 - B3 SINE B2 -4 212 3 5 1144 869 262 164 4 chr17 73313108 73313376 -21959275 + MTD LTR MaLR 109 419 0 5 1144 314 264 143 44 chr17 73313448 73313721 -21958930 - L1MEc LINE L1 -4410 1990 1691 5 1144 308 330 253 8 chr17 73313783 73314135 -21958516 - L1MEc LINE L1 -4755 1645 1208 5 1144 406 288 69 21 chr17 73314406 73314594 -21958057 - L1MEc LINE L1 -5544 856 660 5 1144 252 277 0 70 chr17 73315091 73315219 -21957432 + MER57A-int LTR ERV1 5798 5916 -271 5 1144 351 0 0 0 chr17 73315325 73315364 -21957287 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1144 501 68 0 0 chr17 73315364 73315438 -21957213 + (GA)n Simple_repeat Simple_repeat 1 74 0 5 1144 204 125 0 0 chr17 73316617 73316649 -21956002 + (GAAAA)n Simple_repeat Simple_repeat 4 35 0 5 1144 446 49 0 16 chr17 73317015 73317077 -21955574 + (GA)n Simple_repeat Simple_repeat 1 61 0 5 1144 589 226 211 28 chr17 73317168 73317294 -21955357 - LTR37A LTR ERV1 0 426 274 5 1144 519 17 0 0 chr17 73317294 73317354 -21955297 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 1144 589 226 211 28 chr17 73317354 73317587 -21955064 - LTR37A LTR ERV1 -153 273 1 5 1144 881 144 22 0 chr17 73318784 73318923 -21953728 + B1_Mus1 SINE Alu 6 147 -1 5 1144 345 75 414 9 chr17 73319102 73319208 -21953443 - B2_Mm2 SINE B2 0 195 47 5 1144 1219 107 28 0 chr17 73319238 73319415 -21953236 - B2_Mm2 SINE B2 -12 183 2 5 1144 459 263 105 11 chr17 73319517 73319698 -21952953 + L1MC2 LINE L1 6091 6288 -56 5 1144 283 260 147 46 chr17 73320843 73320952 -21951699 - MIR SINE MIR -77 185 66 5 1144 201 335 41 87 chr17 73320999 73321195 -21951456 + MER5A DNA MER1_type 1 187 -2 5 1144 2107 183 14 9 chr17 73321908 73322276 -21950375 - ORR1C1 LTR MaLR -7 414 3 5 1144 353 269 168 8 chr17 73323763 73323916 -21948735 - L1ME1 LINE L1 -340 6019 5847 5 1144 245 253 37 37 chr17 73323964 73324046 -21948605 - L1M5 LINE L1 -580 5599 5518 5 1144 930 299 80 34 chr17 73324044 73324509 -21948142 - L1ME1 LINE L1 -339 5840 5355 5 1144 1060 308 120 17 chr17 73324512 73325251 -21947400 - L1MD LINE L1 -814 5329 4517 5 1144 188 321 0 0 chr17 73325316 73325372 -21947279 + MIR SINE MIR 61 116 -92 5 1144 297 293 36 0 chr17 73325803 73325926 -21946725 + Lx2 LINE L1 5668 5794 -1203 6 1144 243 309 86 33 chr17 73326642 73326791 -21945860 + MIRm SINE MIR 18 177 -99 6 1144 433 309 8 23 chr17 73327818 73327947 -21944704 - MER94 DNA AcHobo -6 128 2 6 1144 359 307 135 74 chr17 73329081 73329391 -21943260 + MLT2B2 LTR ERVL 56 461 -94 6 1144 2189 178 88 13 chr17 73329396 73329874 -21942777 + Lx9 LINE L1 7129 7642 -2 6 1144 964 284 40 11 chr17 73329951 73330229 -21942422 - B4A SINE B4 -1 291 6 6 1144 229 222 55 11 chr17 73330243 73330334 -21942317 + (TATATG)n Simple_repeat Simple_repeat 2 96 0 6 1144 351 96 0 0 chr17 73332044 73332096 -21940555 + (TGAA)n Simple_repeat Simple_repeat 3 54 0 6 1144 223 316 26 0 chr17 73332178 73332254 -21940397 + MIR SINE MIR 133 210 -52 6 1144 468 0 0 0 chr17 73333164 73333216 -21939435 + (T)n Simple_repeat Simple_repeat 1 52 0 6 1144 997 282 117 12 chr17 73333725 73334059 -21938592 - MTEa LTR MaLR -10 369 1 6 1144 1023 134 137 15 chr17 73334140 73334337 -21938314 + URR1A DNA MER1_type 6 226 0 6 1144 728 340 45 19 chr17 73334600 73334867 -21937784 + B4A SINE B4 1 274 -18 6 1144 549 0 0 0 chr17 73334894 73334955 -21937696 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 1144 659 285 67 0 chr17 73335119 73335284 -21937367 + ID_B1 SINE B4 1 176 -48 6 1144 441 0 0 0 chr17 73336447 73336496 -21936155 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1144 265 305 362 14 chr17 73336563 73336698 -21935953 - B4 SINE B4 -72 220 39 6 1144 905 56 0 0 chr17 73337137 73337244 -21935407 + U6 snRNA snRNA 1 107 0 6 1144 6044 70 10 0 chr17 73337244 73338019 -21934632 + L1_Mus1 LINE L1 5785 6567 0 6 1144 628 309 133 57 chr17 73338031 73338295 -21934356 + B4A SINE B4 1 284 -8 6 1144 705 82 0 0 chr17 73338336 73338433 -21934218 + (GA)n Simple_repeat Simple_repeat 1 97 0 6 1144 198 353 137 31 chr17 73339335 73339496 -21933155 - MER5B DNA MER1_type 0 178 1 6 1144 252 0 0 0 chr17 73340316 73340344 -21932307 + (TA)n Simple_repeat Simple_repeat 2 29 0 6 1144 799 20 20 0 chr17 73340623 73340722 -21931929 - B1_Mus1 SINE Alu -8 140 40 6 1144 207 88 0 0 chr17 73340856 73340890 -21931761 + (TC)n Simple_repeat Simple_repeat 1 34 0 6 1144 189 0 0 0 chr17 73340890 73340911 -21931740 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1144 944 293 151 9 chr17 73341112 73341443 -21931208 + MTE2b LTR MaLR 2 379 0 6 1144 276 330 81 49 chr17 73341524 73341709 -21930942 + MLT1L LTR MaLR 417 607 -3 6 1144 378 0 0 0 chr17 73342736 73342778 -21929873 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1144 473 165 154 23 chr17 73342987 73343117 -21929534 - B1F1 SINE Alu -1 148 2 6 1144 988 283 88 31 chr17 73343792 73344178 -21928473 - BGLII_B LTR ERVK -27 414 7 6 1144 234 273 46 83 chr17 73344208 73344316 -21928335 - MIR SINE MIR -118 144 41 6 1144 249 239 14 27 chr17 73344433 73344506 -21928145 + GA-rich Low_complexity Low_complexity 3 74 0 6 1144 340 292 33 0 chr17 73344821 73344941 -21927710 + (TGGA)n Simple_repeat Simple_repeat 1 124 0 6 1144 249 159 0 0 chr17 73344970 73345014 -21927637 + (TGGA)n Simple_repeat Simple_repeat 3 46 0 6 1144 265 370 54 59 chr17 73345549 73345753 -21926898 + MLT1J LTR MaLR 192 394 -118 6 1144 218 231 138 0 chr17 73348148 73348213 -21924438 - MIR SINE MIR -13 249 176 6 1144 2345 220 48 24 chr17 73348381 73348921 -21923730 + Lx8 LINE L1 6357 6909 -564 6 1144 463 328 96 0 chr17 73348923 73349048 -21923603 + RSINE1 SINE B4 3 139 -26 6 1144 633 27 0 0 chr17 73349067 73349142 -21923509 + (CA)n Simple_repeat Simple_repeat 1 75 0 6 1144 257 75 25 0 chr17 73349142 73349182 -21923469 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 6 1144 836 297 145 58 chr17 73349217 73349714 -21922937 + Lx8 LINE L1 6927 7466 -7 6 1144 342 259 12 12 chr17 73349737 73349819 -21922832 + ID4_ SINE ID 2 83 0 6 1144 286 269 0 15 chr17 73349966 73350034 -21922617 + G-rich Low_complexity Low_complexity 3 69 0 6 1144 2691 130 83 36 chr17 73350300 73350575 -21922076 - RLTR11A LTR ERVK 0 528 260 6 1144 1145 111 0 11 chr17 73350575 73350757 -21921894 + (TTC)n Simple_repeat Simple_repeat 1 180 0 6 1144 2691 130 83 36 chr17 73350757 73350985 -21921666 - RLTR11A LTR ERVK -269 259 1 6 1144 1206 270 55 60 chr17 73351226 73351592 -21921059 - MTEb LTR MaLR -15 364 1 6 1144 21 0 0 0 chr17 73351749 73351770 -21920881 + AT_rich Low_complexity Low_complexity 1 21 0 6 1144 4266 205 34 74 chr17 73351967 73353010 -21919641 - RMER19B LTR ERVK 0 902 1 6 1144 2788 62 3 6 chr17 73353249 73353649 -21919002 + L1_Mus1 LINE L1 6209 6567 0 6 1144 927 73 0 0 chr17 73353762 73353886 -21918765 + (TTTC)n Simple_repeat Simple_repeat 2 125 0 6 1144 946 276 88 50 chr17 73354002 73354379 -21918272 + MER44B DNA MER2_type 10 400 -150 6 1144 264 299 62 45 chr17 73355218 73355330 -21917321 - MIRm SINE MIR -124 152 39 6 1144 189 356 81 63 chr17 73356229 73356290 -21916361 + MIRb SINE MIR 47 111 -157 6 1144 2314 161 72 67 chr17 73356290 73356871 -21915780 - RLTR31A_Mm LTR ERVK 0 584 1 6 1144 189 356 81 63 chr17 73356871 73356983 -21915668 + MIRb SINE MIR 112 222 -46 6 1144 400 312 187 15 chr17 73359192 73359465 -21913186 + Charlie22a DNA MER1_type 90 409 -82 6 1144 750 192 0 0 chr17 73359839 73359990 -21912661 + (TA)n Simple_repeat Simple_repeat 2 152 0 6 1144 383 256 0 6 chr17 73360779 73360956 -21911695 + (TG)n Simple_repeat Simple_repeat 1 176 0 6 1144 307 253 0 117 chr17 73360960 73361054 -21911597 - RSINE1 SINE B4 0 165 83 6 1144 352 331 20 40 chr17 73361115 73361263 -21911388 - B4A SINE B4 -147 145 1 6 1144 202 323 46 0 chr17 73362207 73362272 -21910379 + MIRm SINE MIR 52 119 -157 6 1144 304 200 148 12 chr17 73362407 73362488 -21910163 - PB1D10 SINE Alu -24 93 2 6 1144 347 254 35 131 chr17 73362831 73362976 -21909675 + L1M4 LINE L1 5528 5658 -526 6 1144 331 291 73 63 chr17 73363162 73363353 -21909298 + MIRb SINE MIR 37 229 -39 6 1144 442 368 49 15 chr17 73365522 73365726 -21906925 - MIRb SINE MIR -27 241 31 6 1144 1519 199 116 0 chr17 73366195 73366522 -21906129 - ORR1B2 LTR MaLR -2 365 1 6 1144 253 234 62 49 chr17 73366606 73366687 -21905964 - RCHARR1 DNA MER1_type 0 974 893 6 1144 483 281 56 21 chr17 73366690 73366832 -21905819 + ID_B1 SINE B4 12 158 -66 6 1144 2280 190 59 30 chr17 73366880 73367423 -21905228 - RCHARR1 DNA MER1_type -69 905 347 6 1144 504 48 0 0 chr17 73367504 73367567 -21905084 + (TG)n Simple_repeat Simple_repeat 1 63 0 6 1144 180 271 62 78 chr17 73367621 73367685 -21904966 + MIRm SINE MIR 69 131 -145 6 1144 2307 139 0 21 chr17 73367706 73368081 -21904570 + ORR1B2 LTR MaLR 1 367 0 6 1144 869 323 117 34 chr17 73368318 73368703 -21903948 - MER21B LTR ERV1 -69 794 378 6 1144 1619 160 37 77 chr17 73368703 73369054 -21903597 - RLTR11A LTR ERVK 0 528 192 6 1144 785 247 37 62 chr17 73369018 73369260 -21903391 - MER21B LTR ERV1 -478 385 150 6 1144 642 222 40 1 chr17 73369386 73369567 -21903084 + L1MA6 LINE L1 6110 6298 -5 6 1144 1368 295 13 54 chr17 73371089 73371476 -21901175 + MTEb LTR MaLR 1 371 -8 6 1144 191 273 23 0 chr17 73372363 73372407 -21900244 + MIRm SINE MIR 100 144 -132 6 1144 224 158 53 0 chr17 73372481 73372557 -21900094 + GA-rich Low_complexity Low_complexity 5 84 0 6 1144 324 0 0 0 chr17 73373492 73373528 -21899123 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 6 1144 492 62 0 0 chr17 73373528 73373592 -21899059 + (GAAA)n Simple_repeat Simple_repeat 1 64 0 6 1144 204 40 0 0 chr17 73373663 73373688 -21898963 + (GGAA)n Simple_repeat Simple_repeat 3 27 0 6 1144 319 327 98 20 chr17 73373688 73373811 -21898840 + HAL1-3A_ME LINE L1 2284 2416 -442 6 1144 237 33 0 0 chr17 73373811 73373841 -21898810 + (GGAGA)n Simple_repeat Simple_repeat 4 33 0 6 1144 319 327 98 20 chr17 73373841 73373870 -21898781 + HAL1-3A_ME LINE L1 2417 2448 -410 6 1144 1242 48 0 0 chr17 73374651 73374798 -21897853 + B1_Mm SINE Alu 1 147 0 6 1144 475 248 8 58 chr17 73376199 73376319 -21896332 + PB1D10 SINE Alu 4 117 0 6 1144 264 330 46 0 chr17 73376530 73376639 -21896012 + MLT1A1 LTR MaLR 291 404 -4 6 1144 196 330 22 11 chr17 73376898 73376987 -21895664 + MIRm SINE MIR 24 113 -163 6 1144 363 139 7 0 chr17 73376988 73377048 -21895603 + MTC LTR MaLR 1 63 -356 6 1144 844 131 0 0 chr17 73377081 73377108 -21895543 + B1_Mur3 SINE Alu 19 140 -9 6 1144 225 231 34 121 chr17 73377108 73377203 -21895448 - RMER17D LTR ERVK -360 529 446 6 1144 240 35 0 0 chr17 73377203 73377232 -21895419 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 6 1144 225 231 34 121 chr17 73377232 73377343 -21895308 - RMER17D LTR ERVK -444 445 341 6 1144 2260 121 41 9 chr17 73377345 73377686 -21894965 + MTC LTR MaLR 70 421 0 6 1144 231 309 132 55 chr17 73378351 73378505 -21894146 + MIR3 SINE MIR 32 191 -17 6 1144 355 342 24 24 chr17 73378682 73378847 -21893804 - MamGypLTR2b LTR Gypsy -54 868 704 6 1144 1125 251 92 36 chr17 73379104 73379463 -21893188 - MTEb LTR MaLR 0 379 1 6 1144 1020 161 135 5 chr17 73379697 73379897 -21892754 - URR1A DNA MER1_type 0 226 1 6 1144 744 264 28 174 chr17 73380471 73380703 -21891948 - B4 SINE B4 -18 274 81 6 1144 868 103 80 7 chr17 73380703 73380840 -21891811 - B1_Mus2 SINE Alu 0 147 1 6 1144 623 48 12 0 chr17 73380843 73380926 -21891725 + (TTTTC)n Simple_repeat Simple_repeat 2 85 0 6 1144 744 264 28 174 chr17 73380926 73381010 -21891641 - B4 SINE B4 -212 80 1 6 1144 426 167 0 0 chr17 73381593 73381662 -21890989 - URR1B DNA MER1_type 0 225 157 6 1144 2351 221 28 150 chr17 73381662 73382624 -21890027 + RMER17B LTR ERVK 1 790 -168 6 1144 889 118 138 7 chr17 73382653 73382798 -21889853 - URR1B DNA MER1_type -60 165 2 6 1144 199 364 0 0 chr17 73383425 73383491 -21889160 - L2b LINE L2 -21 3354 3289 6 1144 751 197 11 0 chr17 73383667 73383845 -21888806 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 1144 182 37 0 36 chr17 73384654 73384682 -21887969 + (CCCCCA)n Simple_repeat Simple_repeat 3 29 0 6 1144 567 29 0 0 chr17 73385060 73385129 -21887522 + (CA)n Simple_repeat Simple_repeat 1 69 0 7 1144 207 133 0 0 chr17 73385300 73385345 -21887306 + (A)n Simple_repeat Simple_repeat 1 45 0 7 1144 822 190 62 11 chr17 73387214 73387390 -21885261 + ORR1E LTR MaLR 1 185 -174 7 1144 620 154 0 0 chr17 73387378 73387482 -21885169 - B1_Mus1 SINE Alu -17 131 28 7 1144 1581 291 42 18 chr17 73387714 73388431 -21884220 - L1MA6 LINE L1 -368 5932 5163 7 1144 1374 266 66 5 chr17 73389053 73389480 -21883171 - L1MB4 LINE L1 -7 6173 5721 7 1144 374 220 10 0 chr17 73389739 73389839 -21882812 + CT-rich Low_complexity Low_complexity 1 101 0 7 1144 944 293 51 11 chr17 73390155 73390511 -21882140 - L1MA5 LINE L1 -20 6280 5911 7 1144 838 128 7 21 chr17 73390999 73391143 -21881508 - URR1A DNA MER1_type -34 192 51 7 1144 491 330 62 91 chr17 73391310 73391663 -21880988 + ORR1E LTR MaLR 10 352 -7 7 1144 676 318 45 35 chr17 73392319 73392606 -21880045 - B4 SINE B4 -2 290 1 7 1144 231 163 47 0 chr17 73392691 73392734 -21879917 + HAL1 LINE L1 2355 2399 -108 7 1144 442 221 33 66 chr17 73393090 73393211 -21879440 + PB1D10 SINE Alu 1 117 0 7 1144 968 279 7 98 chr17 73393783 73393879 -21878772 + B4 SINE B4 1 96 -196 7 1144 1224 135 42 0 chr17 73393879 73394094 -21878557 + Lx LINE L1 6431 6654 0 7 1144 968 279 7 98 chr17 73394094 73394303 -21878348 + B4 SINE B4 97 278 -14 7 1144 300 311 19 19 chr17 73395154 73395262 -21877389 + (CA)n Simple_repeat Simple_repeat 1 108 0 7 1144 1275 114 0 5 chr17 73396593 73396787 -21875864 - ORR1A3 LTR MaLR 0 326 134 7 1144 234 371 68 5 chr17 73396959 73397165 -21875486 + MIRc SINE MIR 17 235 -33 7 1144 31 58 0 0 chr17 73398138 73398190 -21874461 + AT_rich Low_complexity Low_complexity 1 52 0 7 1144 239 243 18 22 chr17 73398412 73398508 -21874143 - L1M5 LINE L1 -303 5821 5727 7 1144 816 284 100 38 chr17 73398555 73398954 -21873697 + L1MA4A LINE L1 5508 5931 -372 7 17 757 209 148 0 chr17 73400217 73400399 -21872252 - B3 SINE B2 -4 212 4 7 1145 288 0 0 0 chr17 73400432 73400464 -21872187 + (TTTTA)n Simple_repeat Simple_repeat 4 35 0 7 1145 393 230 76 32 chr17 73400465 73400622 -21872029 - Lx8 LINE L1 -10 7463 7300 7 1145 888 242 99 36 chr17 73400619 73400872 -21871779 - Lx8 LINE L1 -326 7147 6879 7 1145 528 268 192 37 chr17 73401105 73401376 -21871275 - RMER15 LTR ERVL -2 573 261 7 1145 219 88 0 0 chr17 73401552 73401586 -21871065 + (G)n Simple_repeat Simple_repeat 1 34 0 7 1145 255 289 20 30 chr17 73401598 73401698 -21870953 + MLT1A1 LTR MaLR 310 408 0 7 1145 422 212 58 43 chr17 73402094 73402232 -21870419 + L1MB2 LINE L1 6030 6169 -2 7 1145 243 0 0 0 chr17 73402623 73402650 -21870001 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1145 543 305 53 34 chr17 73402657 73402864 -21869787 - ID_B1 SINE B4 -13 211 1 7 1145 212 149 85 0 chr17 73403474 73403521 -21869130 + MIRc SINE MIR 191 241 -27 7 1145 225 252 13 77 chr17 73404062 73404149 -21868502 + CT-rich Low_complexity Low_complexity 68 147 0 7 1145 1990 129 26 70 chr17 73404149 73404491 -21868160 - ORR1A2 LTR MaLR 0 327 1 7 1145 225 252 13 77 chr17 73404491 73404558 -21868093 + polypyrimidine Low_complexity Low_complexity 3 67 0 7 1145 225 65 0 0 chr17 73405377 73405408 -21867243 + (TGG)n Simple_repeat Simple_repeat 1 31 0 7 1145 531 239 28 0 chr17 73406485 73406594 -21866057 + PB1D7 SINE Alu 1 112 -8 7 1145 188 291 124 26 chr17 73406722 73406835 -21865816 + MIR SINE MIR 137 260 -2 7 1145 232 252 105 26 chr17 73407101 73407215 -21865436 - L1MD LINE L1 -2395 5600 5478 7 1145 700 237 222 9 chr17 73407300 73407530 -21865121 + B4 SINE B4 1 279 -13 7 1145 320 264 56 98 chr17 73408465 73408608 -21864043 + B1F SINE Alu 13 149 0 7 1145 277 246 92 0 chr17 73408611 73408676 -21863975 + ID4_ SINE ID 2 72 -11 7 1145 381 254 59 37 chr17 73409063 73409198 -21863453 - L1MC3 LINE L1 -167 7618 7481 7 1145 2166 164 56 3 chr17 73411999 73412373 -21860278 - ORR1B1 LTR MaLR 0 394 1 7 1145 230 358 10 21 chr17 73413211 73413308 -21859343 - MIRb SINE MIR -166 102 7 7 1145 39 22 0 0 chr17 73414283 73414329 -21858322 + AT_rich Low_complexity Low_complexity 1 46 0 7 1145 814 147 0 0 chr17 73414348 73414477 -21858174 - B3 SINE B2 -86 130 2 7 1145 382 340 83 73 chr17 73414632 73414959 -21857692 + MLT1A0 LTR MaLR 19 348 -17 7 1145 337 292 62 55 chr17 73416571 73416716 -21855935 - ID_B1 SINE B4 -23 201 56 7 1145 1179 161 4 69 chr17 73417251 73417484 -21855167 + URR1A DNA MER1_type 2 219 -7 7 1145 332 259 28 117 chr17 73417326 73417505 -21855146 - CYRA11_Mm Unknown Y-chromosome -297 320 158 7 1145 742 245 63 109 chr17 73418370 73418893 -21853758 + RLTR12B LTR ERVK 11 509 -59 7 1145 1055 93 43 6 chr17 73418966 73419128 -21853523 + B2_Mm2 SINE B2 2 169 -26 7 1145 188 233 23 0 chr17 73419596 73419639 -21853012 - MIRb SINE MIR -79 189 146 7 1145 729 53 0 0 chr17 73420900 73420994 -21851657 + (TC)n Simple_repeat Simple_repeat 2 95 0 7 1145 1176 36 0 0 chr17 73423002 73423140 -21849511 + B1_Mus1 SINE Alu 2 139 -9 7 1145 489 34 0 0 chr17 73423154 73423213 -21849438 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 7 1145 1179 75 0 0 chr17 73423217 73423376 -21849275 + (GAGAA)n Simple_repeat Simple_repeat 2 160 0 7 1145 537 16 0 0 chr17 73423581 73423643 -21849008 + (CA)n Simple_repeat Simple_repeat 2 63 0 7 1145 381 263 114 41 chr17 73423650 73423773 -21848878 - ID_B1 SINE B4 -11 213 82 7 1145 1085 96 7 0 chr17 73423798 73423944 -21848707 - B1_Mus1 SINE Alu 0 148 2 7 1145 268 214 17 35 chr17 73423944 73424002 -21848649 - ID_B1 SINE B4 -132 92 36 7 1145 3767 229 35 13 chr17 73424292 73425577 -21847074 - L1MB7 LINE L1 -21 6163 4850 7 1145 401 81 16 0 chr17 73426156 73426218 -21846433 + (TG)n Simple_repeat Simple_repeat 2 64 0 7 1145 783 314 55 4 chr17 73426226 73426501 -21846150 - B4A SINE B4 -3 289 1 7 1145 521 145 236 0 chr17 73426638 73426799 -21845852 + MTE2a LTR MaLR 1 199 -180 7 1145 420 20 0 0 chr17 73426803 73426852 -21845799 + (TTCC)n Simple_repeat Simple_repeat 3 51 0 7 1145 379 206 27 0 chr17 73427284 73427357 -21845294 + ID4_ SINE ID 3 77 -6 7 1145 297 173 53 13 chr17 73427469 73427545 -21845106 + L1M LINE L1 5258 5336 -955 7 1145 217 232 18 0 chr17 73427545 73427601 -21845050 + ID2 SINE ID 1 57 -26 7 1145 254 173 104 26 chr17 73427628 73427705 -21844946 + L1M LINE L1 5329 5411 -889 7 1145 214 216 15 227 chr17 73427815 73427947 -21844704 + PB1D10 SINE Alu 10 113 -4 7 1145 898 28 60 14 chr17 73428059 73428275 -21844376 + (CA)n Simple_repeat Simple_repeat 1 226 0 7 1145 1081 177 0 166 chr17 73429330 73429495 -21843156 + URR1A DNA MER1_type 1 140 -86 7 1145 1023 120 0 0 chr17 73429495 73429653 -21842998 + (GAAA)n Simple_repeat Simple_repeat 3 160 0 7 1145 1176 61 0 39 chr17 73429654 73429808 -21842843 + B1_Mus1 SINE Alu 1 148 0 7 1145 1081 177 0 166 chr17 73429808 73429911 -21842740 + URR1A DNA MER1_type 141 226 0 7 1145 317 274 94 0 chr17 73430320 73430426 -21842225 - PB1D10 SINE Alu -1 116 1 7 1145 780 179 29 0 chr17 73430426 73430505 -21842146 - ID SINE ID -140 84 2 7 1145 189 0 0 0 chr17 73430568 73430589 -21842062 + (CAA)n Simple_repeat Simple_repeat 2 22 0 7 1145 369 0 0 0 chr17 73431420 73431461 -21841190 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1145 468 0 0 0 chr17 73431725 73431777 -21840874 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 1145 370 260 124 44 chr17 73431995 73432132 -21840519 - MER45B DNA Tip100 -545 495 348 7 1145 450 0 0 0 chr17 73432145 73432195 -21840456 + (TC)n Simple_repeat Simple_repeat 1 50 0 7 1145 360 0 0 0 chr17 73432195 73432234 -21840417 + (CA)n Simple_repeat Simple_repeat 1 40 0 7 1145 881 272 93 17 chr17 73432246 73432601 -21840050 + MER45B DNA Tip100 551 932 -108 7 1145 543 43 0 0 chr17 73432610 73432680 -21839971 + (TG)n Simple_repeat Simple_repeat 1 70 0 7 1145 369 214 39 39 chr17 73432743 73432845 -21839806 + MER45B DNA Tip100 936 1037 -3 7 1145 262 313 44 15 chr17 73432845 73432981 -21839670 + L2a LINE L2 3287 3426 0 7 1145 207 0 0 0 chr17 73433635 73433658 -21838993 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 1145 925 171 0 0 chr17 73433876 73434016 -21838635 + B1_Mus1 SINE Alu 3 142 -6 7 1145 667 185 11 27 chr17 73434041 73434224 -21838427 + GA-rich Low_complexity Low_complexity 1 180 0 7 1145 288 0 0 0 chr17 73436086 73436118 -21836533 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 1145 1403 75 32 5 chr17 73437207 73437395 -21835256 - B2_Mm2 SINE B2 -1 194 2 7 1145 896 259 5 19 chr17 73437421 73437630 -21835021 - B3 SINE B2 -5 211 6 7 1145 753 267 10 15 chr17 73438485 73438683 -21833968 + ID_B1 SINE B4 2 198 -26 7 1145 300 274 206 0 chr17 73438959 73439061 -21833590 + B1F SINE Alu 10 132 -17 7 1145 181 0 0 65 chr17 73439306 73439337 -21833314 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 7 1145 674 304 10 19 chr17 73439503 73439711 -21832940 + ID_B1 SINE B4 9 214 -10 7 1145 803 210 24 24 chr17 73439717 73439922 -21832729 - RMER10B LTR ERVL 0 398 194 7 1145 1330 159 0 54 chr17 73439907 73440166 -21832485 - RMER10B LTR ERVL -135 263 19 7 1145 192 77 0 0 chr17 73440179 73440205 -21832446 + (CAA)n Simple_repeat Simple_repeat 2 27 0 7 1145 22 35 0 0 chr17 73440563 73440592 -21832059 + AT_rich Low_complexity Low_complexity 1 29 0 7 1145 256 215 44 44 chr17 73440608 73440676 -21831975 + PB1D7 SINE Alu 51 118 -2 7 1145 270 0 0 0 chr17 73441694 73441724 -21830927 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 1145 259 386 12 29 chr17 73442305 73442476 -21830175 - MLT1A0 LTR MaLR -2 363 196 7 1145 757 248 52 14 chr17 73442476 73442689 -21829962 - ID_B1 SINE B4 -1 223 3 8 1145 2525 42 18 3 chr17 73442692 73443028 -21829623 + ORR1A1 LTR MaLR 1 341 -5 8 1145 420 71 0 0 chr17 73443195 73443251 -21829400 + (CA)n Simple_repeat Simple_repeat 2 57 0 8 1145 288 0 0 0 chr17 73443335 73443367 -21829284 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 1145 672 261 45 0 chr17 73443403 73443579 -21829072 - L1MA4 LINE L1 -368 5932 5749 8 1145 637 257 35 12 chr17 73443626 73443795 -21828856 - MLT1A0 LTR MaLR -192 173 1 7 1145 180 0 0 0 chr17 73443844 73443864 -21828787 + (CTG)n Simple_repeat Simple_repeat 3 22 0 8 1145 266 376 89 6 chr17 73444043 73444201 -21828450 - MIRc SINE MIR -78 190 20 8 1145 344 270 150 7 chr17 73444347 73444500 -21828151 + MER5B DNA MER1_type 1 175 -3 8 1145 226 0 0 56 chr17 73445394 73445430 -21827221 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 8 1145 432 233 24 79 chr17 73445600 73445726 -21826925 + PB1D7 SINE Alu 1 119 -1 8 1145 823 279 137 52 chr17 73445819 73446205 -21826446 + MTD LTR MaLR 1 419 0 8 1145 661 102 20 0 chr17 73446572 73446670 -21825981 - B1_Mur3 SINE Alu -40 109 10 8 1145 273 282 14 0 chr17 73447116 73447187 -21825464 + MLT1D LTR MaLR 21 92 -413 8 1145 385 284 38 81 chr17 73447215 73447410 -21825241 + MLT1D LTR MaLR 183 368 -137 8 1145 843 287 44 35 chr17 73447410 73447779 -21824872 + MLT1D LTR MaLR 4 374 -131 8 1145 333 319 112 38 chr17 73447876 73448178 -21824473 + MTEa LTR MaLR 8 355 -24 8 1145 262 232 12 24 chr17 73448209 73448293 -21824358 + MLT1D LTR MaLR 423 505 0 8 1145 1256 244 127 0 chr17 73448499 73448871 -21823780 - MTD LTR MaLR -14 405 2 8 1145 330 282 79 24 chr17 73448871 73448996 -21823655 - B1F SINE Alu -17 132 1 8 1145 364 285 57 68 chr17 73449172 73449223 -21823428 + ID_B1 SINE B4 43 217 -7 8 1145 668 191 79 0 chr17 73449223 73449349 -21823302 + B1_Mus2 SINE Alu 5 140 -7 8 1145 24 0 0 0 chr17 73449379 73449403 -21823248 + AT_rich Low_complexity Low_complexity 1 24 0 8 1145 327 80 109 0 chr17 73449425 73449563 -21823088 + (TA)n Simple_repeat Simple_repeat 1 153 0 8 1145 246 154 63 42 chr17 73449579 73449674 -21822977 + (TATAA)n Simple_repeat Simple_repeat 5 101 0 8 1145 237 239 141 0 chr17 73449676 73449747 -21822904 + B3 SINE B2 136 216 0 8 1145 732 274 86 4 chr17 73449778 73450035 -21822616 - MER74A LTR ERVL -22 536 259 8 1145 248 255 54 208 chr17 73450133 73450311 -21822340 + RMER10A LTR ERVL 25 183 -259 8 1145 396 0 0 0 chr17 73450311 73450355 -21822296 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 8 1145 1158 44 0 0 chr17 73450355 73450492 -21822159 - B1_Mm SINE Alu -10 137 1 8 1145 248 255 54 208 chr17 73450492 73450773 -21821878 + RMER10A LTR ERVL 184 413 -29 8 1145 450 294 123 9 chr17 73450787 73451007 -21821644 - MER74A LTR ERVL -311 247 3 8 1145 2435 74 6 58 chr17 73451102 73451447 -21821204 + ORR1A2 LTR MaLR 1 327 0 8 1145 349 259 83 41 chr17 73451531 73451652 -21820999 + RSINE1 SINE B4 7 132 -33 8 1145 235 262 9 9 chr17 73452403 73452511 -21820140 + GA-rich Low_complexity Low_complexity 1 108 0 8 1145 348 24 0 0 chr17 73452856 73452897 -21819754 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 1145 285 210 0 0 chr17 73453220 73453282 -21819369 + GA-rich Low_complexity Low_complexity 3 64 0 8 1145 396 343 109 53 chr17 73453822 73454124 -21818527 + LTR16A1 LTR ERVL 67 385 -71 8 1145 535 200 0 7 chr17 73455485 73455593 -21817058 - B1_Mur4 SINE Alu -16 104 2 8 1145 221 275 0 42 chr17 73456121 73456193 -21816458 - B1F2 SINE Alu -80 69 1 8 1145 216 0 0 0 chr17 73456482 73456506 -21816145 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 8 1145 305 144 0 35 chr17 73456508 73456594 -21816057 + A-rich Low_complexity Low_complexity 1 83 0 8 1145 189 74 0 0 chr17 73456606 73456633 -21816018 + (CAA)n Simple_repeat Simple_repeat 2 28 0 8 1145 222 219 82 0 chr17 73458047 73458120 -21814531 - PB1D10 SINE Alu -38 79 1 8 1145 192 111 0 0 chr17 73458148 73458184 -21814467 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 8 1145 930 86 42 21 chr17 73458184 73458327 -21814324 - B1_Mm SINE Alu -1 146 1 8 1145 525 226 0 9 chr17 73458737 73458853 -21813798 - B3A SINE B2 -82 116 2 8 1145 208 119 0 45 chr17 73459115 73459139 -21813512 + polypyrimidine Low_complexity Low_complexity 20 43 0 8 1145 3980 51 2 2 chr17 73459139 73459627 -21813024 - L1Md_F2 LINE L1 0 6582 6095 8 1145 208 119 0 45 chr17 73459627 73459646 -21813005 + polypyrimidine Low_complexity Low_complexity 2 19 0 8 1145 1139 82 7 0 chr17 73459648 73459794 -21812857 - B1_Mus2 SINE Alu 0 147 1 8 1145 248 296 112 41 chr17 73459921 73460090 -21812561 - MIRb SINE MIR -6 262 82 8 1145 353 228 51 0 chr17 73460114 73460193 -21812458 - ID4_ SINE ID 0 83 1 8 1145 2921 105 98 38 chr17 73460222 73460776 -21811875 + MT2B LTR ERVL 1 587 -14 8 1145 294 355 9 9 chr17 73460780 73460891 -21811760 - B1F1 SINE Alu -38 111 1 8 1145 275 301 31 54 chr17 73461069 73461199 -21811452 - B1F SINE Alu -1 148 22 8 1145 1683 218 131 24 chr17 73461337 73461788 -21810863 - RLTR19 LTR ERVK 0 499 1 8 1145 649 248 63 118 chr17 73461822 73461880 -21810771 - B4A SINE B4 -66 226 167 8 1145 216 0 0 0 chr17 73461880 73461904 -21810747 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 8 1145 649 248 63 118 chr17 73461904 73461984 -21810667 - B4A SINE B4 -126 166 111 8 1145 655 209 265 112 chr17 73461984 73462384 -21810267 + RMER6B LTR ERVK 1 461 0 8 1145 649 248 63 118 chr17 73462384 73462482 -21810169 - B4A SINE B4 -182 110 2 8 1145 1837 188 19 16 chr17 73463044 73463417 -21809234 + MTD LTR MaLR 46 419 0 8 1145 240 35 0 0 chr17 73463453 73463482 -21809169 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 8 1145 981 94 60 0 chr17 73463482 73463631 -21809020 - B2_Mm2 SINE B2 -34 161 4 8 1145 424 221 151 32 chr17 73463641 73463767 -21808884 - B1F SINE Alu -8 141 1 8 1145 288 306 21 83 chr17 73464002 73464150 -21808501 - PB1D10 SINE Alu -3 146 1 8 1145 399 342 9 0 chr17 73464037 73464151 -21808500 - ID_B1 SINE B4 -29 195 81 8 1145 624 256 173 16 chr17 73464552 73464858 -21807793 + L1ME3 LINE L1 5436 5789 -375 8 1145 1470 78 5 0 chr17 73465124 73465315 -21807336 + B2_Mm1a SINE B2 2 193 0 8 1145 267 292 24 48 chr17 73465334 73465460 -21807191 + L1ME3 LINE L1 5934 6056 -106 8 1145 719 279 20 5 chr17 73465523 73465725 -21806926 + Lx8 LINE L1 7177 7381 -92 8 1145 638 200 0 0 chr17 73465782 73465897 -21806754 + MTC LTR MaLR 1 115 -306 8 1145 333 0 0 0 chr17 73465900 73465937 -21806714 + (TG)n Simple_repeat Simple_repeat 1 37 0 8 1145 829 131 195 22 chr17 73465960 73466186 -21806465 - RLTR28B LTR ERVL -200 281 17 8 1145 856 270 104 14 chr17 73466199 73466496 -21806155 + MTE2b LTR MaLR 1 324 -55 8 1145 2455 133 45 15 chr17 73466613 73467016 -21805635 + MTC LTR MaLR 5 419 -2 8 1145 334 341 22 37 chr17 73467077 73467211 -21805440 - ID_B1 SINE B4 -9 215 84 8 1145 225 213 147 11 chr17 73467551 73467646 -21805005 - PB1D10 SINE Alu -3 114 7 8 1145 225 224 0 0 chr17 73468083 73468132 -21804519 - MLT1D LTR MaLR -2 503 455 8 1145 956 269 74 0 chr17 73468531 73468881 -21803770 - MTE2b LTR MaLR 0 379 4 8 1145 503 286 35 0 chr17 73468884 73469087 -21803564 - L1M3 LINE L1 -1588 4555 4346 8 1145 816 175 0 7 chr17 73469113 73469257 -21803394 - B1_Mus2 SINE Alu 0 147 5 8 1145 512 269 90 7 chr17 73469279 73469505 -21803146 - L1M3 LINE L1 -1809 4334 4079 8 1145 337 272 184 0 chr17 73469648 73469773 -21802878 + B1F SINE Alu 1 148 -1 8 1145 661 308 75 64 chr17 73469846 73470235 -21802416 - L1MD1 LINE L1 -245 5997 5605 8 1145 426 287 35 0 chr17 73470232 73470375 -21802276 - L1M4 LINE L1 -1300 4846 4699 8 1145 342 67 0 0 chr17 73470408 73470453 -21802198 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 1145 392 219 49 0 chr17 73470459 73470541 -21802110 - RSINE1 SINE B4 -35 130 45 8 1145 445 154 22 0 chr17 73470569 73470660 -21801991 + CT-rich Low_complexity Low_complexity 1 93 0 8 1145 272 164 12 99 chr17 73470660 73470741 -21801910 - B1F SINE Alu 0 149 76 8 1145 284 250 60 0 chr17 73470832 73470916 -21801735 - ORR1D1 LTR MaLR 0 374 286 8 1145 231 261 21 54 chr17 73471200 73471293 -21801358 - MTEa LTR MaLR -12 367 278 8 1145 304 338 90 66 chr17 73471325 73471569 -21801082 - MTEa LTR MaLR -91 288 39 8 1145 525 58 0 0 chr17 73471779 73471848 -21800803 + (GGGAGA)n Simple_repeat Simple_repeat 2 70 0 8 1145 909 226 39 35 chr17 73471891 73472175 -21800476 - L1MD LINE L1 -2468 3678 3394 8 1145 754 233 22 6 chr17 73472354 73472548 -21800103 - MTD LTR MaLR -8 411 197 8 1145 5731 68 27 8 chr17 73472643 73473419 -21799232 - L1_Mus4 LINE L1 0 6636 5846 8 1145 290 155 13 17 chr17 73473454 73473525 -21799126 - B2_Mm2 SINE B2 -95 121 48 8 1145 1186 93 12 0 chr17 73473553 73473725 -21798926 - B2_Mm1t SINE B2 -14 179 6 8 1145 2202 41 0 1 chr17 73473726 73474013 -21798638 - L1_Mus4 LINE L1 -44 5839 5556 8 1145 23 0 0 0 chr17 73474146 73474169 -21798482 + AT_rich Low_complexity Low_complexity 1 23 0 8 1145 681 128 0 0 chr17 73474174 73474276 -21798375 - MT2B LTR ERVL -499 102 1 8 1145 612 160 12 111 chr17 73474277 73474439 -21798212 - MERVL_2A-int LTR ERVL -2 5759 5614 8 1145 316 148 48 30 chr17 73474473 73474640 -21798011 + (TA)n Simple_repeat Simple_repeat 2 171 0 8 1145 298 134 15 0 chr17 73474640 73474707 -21797944 + MT2B LTR ERVL 545 601 0 8 1145 345 282 25 41 chr17 73474714 73474836 -21797815 + MER21B LTR ERV1 619 738 -125 8 1145 230 268 27 27 chr17 73474833 73474906 -21797745 + MER21B LTR ERV1 667 739 -124 8 1145 2023 96 204 3 chr17 73475333 73475666 -21796985 + MTB LTR MaLR 1 400 0 8 1145 6952 54 42 0 chr17 73476867 73477724 -21794927 - RLTR13B1 LTR ERVK 0 893 1 8 1145 302 280 116 43 chr17 73477733 73477871 -21794780 - B3A SINE B2 -50 148 1 8 1145 256 315 216 32 chr17 73478898 73479213 -21793438 + MLT1D LTR MaLR 133 505 0 8 1145 521 71 0 0 chr17 73479296 73479366 -21793285 + B2_Mm2 SINE B2 3 72 -123 9 1145 271 312 82 10 chr17 73479383 73479480 -21793171 - B1F SINE Alu -45 104 1 9 1145 367 280 157 28 chr17 73479480 73479767 -21792884 - L1M3 LINE L1 -1817 4323 4000 9 1145 546 63 0 0 chr17 73480437 73480516 -21792135 + (CA)n Simple_repeat Simple_repeat 2 80 0 9 1145 543 270 21 28 chr17 73480598 73480739 -21791912 + RSINE1 SINE B4 26 165 0 9 1145 29 70 0 0 chr17 73480745 73480802 -21791849 + AT_rich Low_complexity Low_complexity 1 57 0 9 1145 401 293 36 54 chr17 73480802 73480968 -21791683 - RSINE1 SINE B4 0 165 3 9 1145 359 253 40 7 chr17 73481626 73481777 -21790874 - LTR37A LTR ERV1 -39 387 232 9 1145 292 291 77 10 chr17 73483044 73483148 -21789503 + PB1D7 SINE Alu 3 113 -7 9 1145 391 290 65 0 chr17 73483382 73483506 -21789145 - ID_B1 SINE B4 -13 211 80 9 1145 297 309 0 20 chr17 73483564 73483675 -21788976 + PB1D7 SINE Alu 9 115 -5 9 1145 364 294 156 0 chr17 73485481 73485666 -21786985 + L1ME3A LINE L1 5845 6060 -113 9 1145 1236 301 63 2 chr17 73485976 73486372 -21786279 - Lx8 LINE L1 -236 7237 6818 9 1145 528 56 0 0 chr17 73486432 73486504 -21786147 + (CA)n Simple_repeat Simple_repeat 2 73 0 9 1145 216 0 0 0 chr17 73489119 73489143 -21783508 + (T)n Simple_repeat Simple_repeat 1 24 0 9 1145 743 273 30 30 chr17 73489229 73489531 -21783120 + L1MC3 LINE L1 7451 7752 -33 9 1145 639 201 40 46 chr17 73489735 73489886 -21782765 - MTE2b LTR MaLR -11 368 219 9 1145 229 51 0 49 chr17 73489922 73489963 -21782688 + (CACCC)n Simple_repeat Simple_repeat 3 41 0 9 1145 216 0 0 0 chr17 73489979 73490003 -21782648 + (TG)n Simple_repeat Simple_repeat 1 24 0 9 1145 446 257 88 7 chr17 73490013 73490150 -21782501 - B3A SINE B2 -50 148 1 9 1145 249 292 13 40 chr17 73490287 73490362 -21782289 - MTE2b LTR MaLR -280 99 27 9 1145 360 328 80 38 chr17 73490817 73491131 -21781520 + MARNA DNA Mariner 207 533 -53 9 1145 301 219 14 14 chr17 73492453 73492527 -21780124 - PB1D7 SINE Alu -17 103 30 9 1145 322 68 0 0 chr17 73492697 73492741 -21779910 - MTA_Mm LTR MaLR 0 407 364 9 1145 2056 42 0 0 chr17 73492741 73492978 -21779673 - L1Md_F2 LINE L1 -196 5687 5451 9 1145 7436 36 23 0 chr17 73492978 73493858 -21778793 + L1Md_F2 LINE L1 5681 6580 -2 9 1145 2672 42 42 0 chr17 73493865 73494219 -21778432 - MTA_Mm LTR MaLR -27 369 1 9 1145 226 297 48 38 chr17 73494260 73494365 -21778286 - PB1D7 SINE Alu -6 114 9 9 1145 230 336 94 43 chr17 73494536 73494769 -21777882 - Lx8 LINE L1 -16 7457 7213 9 1145 286 271 82 33 chr17 73494798 73494920 -21777731 - Lx8 LINE L1 -562 6911 6784 9 1145 21 0 0 0 chr17 73495186 73495207 -21777444 + AT_rich Low_complexity Low_complexity 1 21 0 9 1145 341 250 2 79 chr17 73496210 73496343 -21776308 - PB1D7 SINE Alu 0 120 1 9 1145 285 258 25 19 chr17 73496505 73496590 -21776061 - B3A SINE B2 -27 189 108 9 1145 5451 78 103 0 chr17 73496590 73497349 -21775302 + L1_Mus3 LINE L1 5801 6637 -1 9 1145 209 354 96 14 chr17 73497659 73497805 -21774846 + MIRb SINE MIR 22 179 -89 9 1145 23 54 0 0 chr17 73498832 73498869 -21773782 + AT_rich Low_complexity Low_complexity 1 37 0 9 1145 919 312 76 40 chr17 73500329 73500883 -21771768 - L1MB8 LINE L1 -16 6162 5589 1 1145 250 300 82 66 chr17 73501374 73501556 -21771095 + B4A SINE B4 2 186 -106 2 1145 4905 70 7 0 chr17 73502021 73502637 -21770014 + Lx3_Mus LINE L1 6267 6886 -123 3 1145 207 0 0 0 chr17 73502638 73502661 -21769990 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1145 1279 54 0 0 chr17 73502862 73503009 -21769642 + B1_Mus1 SINE Alu 2 148 0 5 1145 282 56 0 0 chr17 73503009 73503045 -21769606 + (A)n Simple_repeat Simple_repeat 1 36 0 6 1145 305 225 56 0 chr17 73504739 73504810 -21767841 - L1ME3B LINE L1 -86 6154 6080 7 1145 192 40 0 0 chr17 73504959 73504984 -21767667 + (T)n Simple_repeat Simple_repeat 1 25 0 8 1145 808 227 53 22 chr17 73505609 73505834 -21766817 - L1_Rod LINE L1 -16 5831 5600 9 1145 351 0 0 0 chr17 73505942 73505981 -21766670 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1145 288 70 0 0 chr17 73507826 73507869 -21764782 + (T)n Simple_repeat Simple_repeat 1 43 0 1 1145 659 337 39 20 chr17 73508295 73508549 -21764102 + MIR SINE MIR 4 262 0 1 1145 278 241 79 139 chr17 73508643 73508744 -21763907 - B1F1 SINE Alu -52 97 3 1 1145 216 363 22 11 chr17 73508763 73508855 -21763796 + BC1_Mm scRNA scRNA 2 94 -58 1 1145 252 0 0 0 chr17 73508956 73508984 -21763667 + (CAGC)n Simple_repeat Simple_repeat 3 30 0 1 1145 391 325 72 11 chr17 73509155 73509432 -21763219 - L1M5 LINE L1 -438 5741 5448 1 1145 23 33 0 0 chr17 73511602 73511632 -21761019 + AT_rich Low_complexity Low_complexity 1 30 0 1 1145 265 347 29 46 chr17 73512363 73512434 -21760217 + MT2B LTR ERVL 98 248 -353 1 1145 555 167 62 0 chr17 73512434 73512530 -21760121 + B1_Mus1 SINE Alu 6 107 -41 1 1145 276 257 83 28 chr17 73512438 73512546 -21760105 + ID_B1 SINE B4 90 203 -21 2 1145 213 175 0 0 chr17 73512760 73512800 -21759851 + CT-rich Low_complexity Low_complexity 2 41 0 2 1145 1848 261 133 52 chr17 73512864 73513600 -21759051 - MTE-int LTR MaLR -520 1060 265 2 1145 2348 48 73 3 chr17 73513673 73513989 -21758662 - ORR1A1 LTR MaLR -8 338 1 2 1145 356 250 0 0 chr17 73514097 73514161 -21758490 - PB1D9 SINE Alu -55 65 2 2 1145 231 268 0 112 chr17 73514161 73514177 -21758474 - MT2B LTR ERVL -379 222 152 2 1145 7586 31 10 0 chr17 73515103 73515995 -21756656 - L1Md_F2 LINE L1 -1 6581 5681 2 1145 452 70 0 0 chr17 73515996 73516061 -21756590 - L1Md_F2 LINE L1 -615 5951 5887 2 1145 12199 57 7 2 chr17 73516062 73517584 -21755067 + L1Md_F2 LINE L1 4355 5883 0 2 1145 922 102 14 35 chr17 73517612 73517628 -21755023 + B1_Mur4 SINE Alu 1 12 -138 2 1145 3386 56 2 8 chr17 73517628 73518026 -21754625 - MTA_Mm LTR MaLR 0 396 1 2 1145 971 71 0 0 chr17 73518026 73518152 -21754499 + B1_Mm SINE Alu 12 137 -10 3 1145 603 275 190 57 chr17 73519713 73520098 -21752553 - Lx8 LINE L1 -395 7078 6643 3 1145 279 0 0 0 chr17 73520117 73520148 -21752503 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 1145 1016 284 213 55 chr17 73520148 73522081 -21750570 - Lx8 LINE L1 -1026 6447 4155 3 1145 488 157 162 77 chr17 73522556 73522610 -21750041 - B3 SINE B2 -86 130 77 3 1145 3488 48 2 12 chr17 73522610 73523014 -21749637 - MTB LTR MaLR 0 400 1 3 1145 488 157 162 77 chr17 73523014 73523076 -21749575 - B3 SINE B2 -140 76 4 3 1145 925 150 13 33 chr17 73525046 73525198 -21747453 + B1_Mur4 SINE Alu 1 149 -1 3 1145 292 274 84 23 chr17 73525805 73525936 -21746715 - L1MD3 LINE L1 -410 7585 7447 3 1145 233 293 106 19 chr17 73526019 73526179 -21746472 - L1MD3 LINE L1 -850 7032 6859 3 1145 498 232 61 0 chr17 73526202 73526301 -21746350 - PB1D9 SINE Alu -15 105 1 3 1145 417 326 106 50 chr17 73526305 73526644 -21746007 - MLT1D LTR MaLR -145 360 3 3 1145 824 177 0 34 chr17 73527929 73528075 -21744576 + B1_Mus2 SINE Alu 7 147 0 3 1145 271 214 81 26 chr17 73528412 73528514 -21744137 - B1_Mm SINE Alu -16 134 27 4 1145 213 185 278 0 chr17 73528526 73528580 -21744071 - B1_Mur4 SINE Alu -81 69 1 4 143 32470 68 2 1 chr17 73528658 73532832 -21739819 + L1_Mm LINE L1 1404 5586 -297 4 1146 8622 48 3 0 chr17 73532832 73533825 -21738826 + L1Md_F2 LINE L1 5587 6582 0 4 1146 547 280 32 26 chr17 73534105 73534259 -21738392 - RSINE1 SINE B4 -8 157 3 4 1146 749 216 91 2 chr17 73534478 73534671 -21737980 - B3A SINE B2 -8 208 1 4 1146 510 218 0 60 chr17 73534734 73534851 -21737800 + B1F SINE Alu 40 149 0 4 1146 286 306 47 7 chr17 73535251 73535399 -21737252 + HAL1 LINE L1 1513 1666 -841 4 1146 239 313 20 115 chr17 73536557 73536705 -21735946 - MLT1M LTR MaLR -487 185 52 4 1146 858 146 0 55 chr17 73536927 73537072 -21735579 + B1_Mus2 SINE Alu 9 145 -2 4 1146 256 327 47 28 chr17 73537490 73537597 -21735054 + PB1D10 SINE Alu 1 109 -8 4 1146 25 31 0 0 chr17 73537710 73537742 -21734909 + AT_rich Low_complexity Low_complexity 1 32 0 5 1146 495 238 90 30 chr17 73538044 73538178 -21734473 + B1F SINE Alu 1 142 -7 5 1146 1267 27 0 20 chr17 73540702 73540851 -21731800 - B1_Mm SINE Alu -1 146 1 5 1146 4414 78 9 2 chr17 73541190 73541751 -21730900 - L1_Mus3 LINE L1 -9 6629 6065 5 1146 666 88 0 0 chr17 73541753 73541844 -21730807 - B1_Mus1 SINE Alu -57 91 1 5 1146 322 287 31 39 chr17 73542477 73542604 -21730047 - MLT2D LTR ERVL -235 179 54 5 1146 851 250 73 16 chr17 73542604 73542778 -21729873 - MTE2a LTR MaLR -2 377 190 5 1146 306 0 0 0 chr17 73542778 73542812 -21729839 + (CTTG)n Simple_repeat Simple_repeat 3 36 0 5 1146 851 283 79 49 chr17 73542812 73543008 -21729643 - MTE2a LTR MaLR -177 219 6 5 1146 2144 150 111 7 chr17 73543472 73543876 -21728775 + RMER1B Other Other 617 1062 -4 5 1146 252 247 107 27 chr17 73545226 73545301 -21727350 - ID4 SINE ID -1 82 2 5 1146 276 77 0 0 chr17 73545473 73545512 -21727139 + (CCTA)n Simple_repeat Simple_repeat 3 41 0 6 1146 862 160 195 0 chr17 73545569 73545738 -21726913 + B3 SINE B2 2 203 -13 6 1146 665 228 31 0 chr17 73545802 73545929 -21726722 - B1_Mur1 SINE Alu -16 133 3 6 1146 1092 73 73 0 chr17 73547627 73547764 -21724887 - B1_Mus1 SINE Alu 0 148 2 6 1146 600 14 0 0 chr17 73548085 73548154 -21724497 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 6 1146 666 49 0 0 chr17 73548154 73548236 -21724415 - B1_Mus2 SINE Alu -8 139 58 6 1146 522 79 0 0 chr17 73548649 73548725 -21723926 + (TG)n Simple_repeat Simple_repeat 2 77 0 6 1146 251 269 29 15 chr17 73550112 73550180 -21722471 - Tigger12A DNA MER2_type 0 791 723 6 1146 182 318 86 54 chr17 73550709 73550802 -21721849 - MIRb SINE MIR -157 111 16 6 1146 429 20 0 0 chr17 73550910 73550960 -21721691 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 1146 959 184 108 0 chr17 73552086 73552271 -21720380 - B3 SINE B2 0 216 12 7 1146 239 130 0 98 chr17 73552282 73552333 -21720318 + MT2A LTR ERVL 158 203 -330 7 1146 504 45 0 0 chr17 73553637 73553704 -21718947 + (TG)n Simple_repeat Simple_repeat 2 68 0 7 1146 222 118 0 0 chr17 73553955 73553989 -21718662 + (TCCC)n Simple_repeat Simple_repeat 4 37 0 7 1146 698 319 5 50 chr17 73555787 73556008 -21716643 + B4A SINE B4 39 249 -43 7 1146 456 279 0 26 chr17 73557163 73557277 -21715374 - B4A SINE B4 -179 113 3 7 1146 186 118 0 0 chr17 73557355 73557389 -21715262 + (TCTCTG)n Simple_repeat Simple_repeat 3 36 0 7 1146 810 252 51 11 chr17 73557423 73557725 -21714926 - L1MA4 LINE L1 -388 5912 5601 7 1146 300 83 0 0 chr17 73557735 73557783 -21714868 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1146 795 182 98 10 chr17 73558508 73558702 -21713949 - L1_Mur3 LINE L1 -423 5457 5247 7 1146 642 153 0 0 chr17 73558702 73558813 -21713838 + CT-rich Low_complexity Low_complexity 1 111 0 8 1146 252 183 84 0 chr17 73558835 73558906 -21713745 - L1M2 LINE L1 -3322 2821 2745 8 1146 24 32 0 0 chr17 73559536 73559567 -21713084 + AT_rich Low_complexity Low_complexity 1 31 0 8 1146 263 306 43 50 chr17 73559626 73559767 -21712884 - RMER19C LTR ERVK -58 553 414 8 1146 723 209 154 13 chr17 73559754 73559987 -21712664 - RMER4B LTR ERVK -303 282 17 8 1146 770 224 29 6 chr17 73560009 73560184 -21712467 - B3 SINE B2 -32 184 6 8 1146 494 281 52 7 chr17 73561043 73561179 -21711472 + RSINE1 SINE B4 3 144 -21 8 1146 959 111 14 7 chr17 73561540 73561685 -21710966 - B1_Mm SINE Alu -1 146 1 8 1146 400 286 161 29 chr17 73563162 73563299 -21709352 - Lx8 LINE L1 -204 7269 7115 8 1146 276 30 0 0 chr17 73563951 73563984 -21708667 + (T)n Simple_repeat Simple_repeat 1 33 0 8 1146 9222 1 0 0 chr17 73564557 73565597 -21707054 - L1Md_A LINE L1 0 6582 5543 9 1146 6885 4 0 0 chr17 73565592 73566347 -21706304 + L1Md_A LINE L1 4782 5536 -347 9 1146 285 200 35 95 chr17 73566347 73566463 -21706188 + B3A SINE B2 88 196 -2 9 1146 2331 131 28 62 chr17 73566573 73567006 -21705645 - RLTR9B2 LTR ERVK -2 418 1 9 1146 405 118 19 139 chr17 73567058 73567166 -21705485 + MT2B LTR ERVL 170 264 -337 9 1146 994 39 0 0 chr17 73567073 73567201 -21705450 + B1_Mus1 SINE Alu 21 148 0 9 1146 1249 28 0 7 chr17 73567949 73568095 -21704556 + B1_Mus2 SINE Alu 2 146 -1 9 1146 477 138 0 0 chr17 73568104 73568184 -21704467 + (GAAA)n Simple_repeat Simple_repeat 3 82 0 9 1146 358 244 34 25 chr17 73568756 73568874 -21703777 + HAL1 LINE L1 1877 1995 -512 9 1146 208 269 0 0 chr17 73572304 73572356 -21700295 + T-rich Low_complexity Low_complexity 1 52 0 9 1146 1171 88 27 81 chr17 73574464 73574650 -21698001 + B2_Mm2 SINE B2 1 176 -19 9 1146 403 289 282 25 chr17 73575940 73576550 -21696101 - L2 LINE L2 -398 3021 2255 1 1146 1448 228 35 27 chr17 73576718 73577084 -21695567 - ORR1D2 LTR MaLR -1 369 1 1 1146 1150 235 136 3 chr17 73577289 73577613 -21695038 - MTE2b LTR MaLR -4 375 9 1 1146 21 36 0 0 chr17 73581018 73581046 -21691605 + AT_rich Low_complexity Low_complexity 1 28 0 1 1146 558 165 40 24 chr17 73581355 73581479 -21691172 - ORR1D1 LTR MaLR 0 374 249 1 1146 344 306 75 42 chr17 73582081 73582320 -21690331 + B4A SINE B4 46 292 0 1 1146 1228 35 0 0 chr17 73582417 73582558 -21690093 + B1_Mus2 SINE Alu 1 141 -6 1 1146 1645 144 100 0 chr17 73582791 73583090 -21689561 - ORR1A4 LTR MaLR 0 329 1 1 1146 780 241 29 67 chr17 73585255 73585567 -21687084 - RMER17C LTR ERVK -110 300 1 1 1146 450 0 0 0 chr17 73586406 73586456 -21686195 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1146 511 302 99 15 chr17 73586576 73586838 -21685813 + B4A SINE B4 1 284 -8 1 1146 180 320 26 39 chr17 73588384 73588462 -21684189 + L2c LINE L2 3270 3346 -41 1 1146 180 0 0 0 chr17 73590699 73590719 -21681932 + (CACCC)n Simple_repeat Simple_repeat 3 22 0 1 1146 550 263 30 8 chr17 73593840 73593974 -21678677 + B1F SINE Alu 8 144 -5 1 1146 601 274 76 79 chr17 73593998 73594275 -21678376 + B4 SINE B4 1 276 -16 1 1146 739 154 123 0 chr17 73595104 73595234 -21677417 + B1_Mus1 SINE Alu 1 146 -2 1 1146 239 167 0 0 chr17 73595256 73595298 -21677353 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1146 201 132 54 54 chr17 73595878 73595934 -21676717 + A-rich Low_complexity Low_complexity 4 59 0 1 1146 326 242 20 69 chr17 73595934 73596036 -21676615 + RSINE1 SINE B4 28 124 -41 1 1146 260 27 27 0 chr17 73596036 73596073 -21676578 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1146 381 284 159 87 chr17 73596241 73596518 -21676133 - MLT1A0 LTR MaLR -68 297 1 1 1146 1700 16 0 0 chr17 73596750 73596937 -21675714 - B2_Mm1a SINE B2 -5 188 2 1 1146 665 283 194 26 chr17 73597486 73598370 -21674281 + L1MA7 LINE L1 4818 5905 -407 1 1146 1235 134 16 8 chr17 73599849 73600099 -21672552 + ORR1A4 LTR MaLR 1 328 -1 1 1146 294 29 0 0 chr17 73601748 73601783 -21670868 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1146 237 291 128 0 chr17 73601804 73601890 -21670761 - Charlie1b DNA MER1_type -338 185 89 1 1146 400 285 103 9 chr17 73602254 73602477 -21670174 + L1MC4a LINE L1 6919 7162 -720 1 1146 240 260 55 0 chr17 73602763 73602836 -21669815 + L1MC4a LINE L1 7565 7641 -241 1 1146 856 144 0 27 chr17 73603829 73603839 -21668812 + (TA)n Simple_repeat Simple_repeat 1 10 0 1 1146 297 0 0 0 chr17 73603839 73603872 -21668779 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1146 856 144 0 27 chr17 73603872 73604046 -21668605 + (TA)n Simple_repeat Simple_repeat 2 170 0 1 1146 628 163 35 11 chr17 73604022 73604196 -21668455 + (CATATA)n Simple_repeat Simple_repeat 2 179 0 1 1146 183 288 92 86 chr17 73604938 73605090 -21667561 + MIRb SINE MIR 24 176 -92 1 1146 450 0 0 0 chr17 73605806 73605856 -21666795 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1146 186 43 0 0 chr17 73608542 73608565 -21664086 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1 1146 1601 32 5 0 chr17 73608585 73608770 -21663881 - B2_Mm1a SINE B2 -6 187 2 1 1146 1989 182 72 63 chr17 73608924 73609339 -21663312 - MTC LTR MaLR -1 420 2 1 1146 855 268 80 100 chr17 73609377 73609688 -21662963 + MTEb LTR MaLR 1 305 -74 1 1146 540 250 165 100 chr17 73609694 73610045 -21662606 + MTE2b LTR MaLR 1 374 -5 1 1146 358 0 0 118 chr17 73610813 73610889 -21661762 - B2_Mm1a SINE B2 0 193 127 1 1146 207 0 0 0 chr17 73610928 73610951 -21661700 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 1 1146 1104 103 0 0 chr17 73610952 73611107 -21661544 - B2_Mm2 SINE B2 -37 158 4 1 1146 551 311 7 13 chr17 73611595 73611748 -21660903 + MLT1A0 LTR MaLR 1 152 -213 1 1146 520 290 137 0 chr17 73611759 73611890 -21660761 + RSINE1 SINE B4 8 156 -9 1 1146 510 272 9 0 chr17 73612138 73612252 -21660399 + PB1D10 SINE Alu 2 116 -1 1 1146 360 200 0 0 chr17 73613038 73613113 -21659538 + (CATA)n Simple_repeat Simple_repeat 2 76 0 1 1146 546 122 0 0 chr17 73613292 73613399 -21659252 + (GA)n Simple_repeat Simple_repeat 2 108 0 1 1146 775 204 171 0 chr17 73613399 73613575 -21659076 - ID_B1 SINE B4 -12 212 7 1 1146 531 270 164 0 chr17 73614196 73614348 -21658303 + MER57C2 LTR ERV1 8 184 -250 1 1146 478 256 89 41 chr17 73615111 73615380 -21657271 + L1MC LINE L1 5026 5307 -839 1 1146 408 264 132 32 chr17 73615671 73615890 -21656761 + L1ME2 LINE L1 5743 5983 -181 1 1146 1392 80 32 0 chr17 73616425 73616613 -21656038 + B2_Mm2 SINE B2 1 194 -1 1 1146 237 132 0 0 chr17 73616659 73616697 -21655954 + (TATG)n Simple_repeat Simple_repeat 3 40 0 1 1146 202 301 46 55 chr17 73617010 73617119 -21655532 + L4 LINE RTE 645 752 -1277 1 1146 349 244 33 22 chr17 73617179 73617271 -21655380 - B1F1 SINE Alu -33 116 24 1 1146 31 0 0 0 chr17 73617282 73617313 -21655338 + AT_rich Low_complexity Low_complexity 1 31 0 1 1146 2014 119 121 6 chr17 73617415 73617761 -21654890 + ORR1B1 LTR MaLR 1 386 -8 1 1146 503 228 0 0 chr17 73617761 73617862 -21654789 + ID_B1 SINE B4 123 223 -1 1 1146 214 175 0 0 chr17 73617862 73617902 -21654749 + (CAAAC)n Simple_repeat Simple_repeat 1 40 0 1 1146 1381 68 6 11 chr17 73618445 73618624 -21654027 + B2_Mm1t SINE B2 2 179 -14 1 1146 485 336 53 49 chr17 73618717 73618781 -21653870 + L1M5 LINE L1 5009 5067 -1079 1 1146 891 223 24 19 chr17 73618781 73618991 -21653660 - B3 SINE B2 -3 213 3 1 1146 485 336 53 49 chr17 73618991 73619211 -21653440 + L1M5 LINE L1 5068 5293 -853 1 1146 2115 54 21 18 chr17 73619255 73619572 -21653079 - L1_Mus1 LINE L1 0 6567 6286 1 1146 427 296 119 40 chr17 73622558 73622811 -21649840 + MLT1D LTR MaLR 233 505 0 1 1146 690 278 0 88 chr17 73623642 73623847 -21648804 + B3A SINE B2 9 195 -3 1 1146 22 35 0 0 chr17 73623886 73623915 -21648736 + AT_rich Low_complexity Low_complexity 1 29 0 1 1146 243 229 28 28 chr17 73625963 73626107 -21646544 + (TA)n Simple_repeat Simple_repeat 2 145 0 1 1146 2208 85 6 53 chr17 73626107 73626444 -21646207 + ORR1A4 LTR MaLR 1 321 -8 1 1146 2114 110 10 10 chr17 73627328 73627631 -21645020 + RLTR25A LTR ERVK 1 303 -800 1 1146 243 0 0 0 chr17 73627695 73627722 -21644929 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1146 207 0 0 0 chr17 73628250 73628273 -21644378 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1146 533 275 99 42 chr17 73628273 73628576 -21644075 - MTD LTR MaLR -53 366 13 1 1146 1160 106 0 6 chr17 73628597 73628777 -21643874 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 1 1146 1166 78 0 123 chr17 73628777 73628988 -21643663 - MusHAL1 LINE L1 -743 1969 1785 1 1146 238 247 83 0 chr17 73630332 73630394 -21642257 - MIR SINE MIR -99 177 103 1 1146 402 276 125 30 chr17 73630594 73630762 -21641889 + MLT1D LTR MaLR 276 459 -46 1 1146 926 313 104 12 chr17 73630891 73631227 -21641424 + MLT1A LTR MaLR 8 374 0 1 1146 409 319 14 7 chr17 73631310 73631452 -21641199 + Lx7 LINE L1 7138 7280 -416 1 1146 212 189 38 0 chr17 73631619 73631672 -21640979 + GA-rich Low_complexity Low_complexity 3 57 0 1 1146 1757 122 25 59 chr17 73631867 73632190 -21640461 - RLTRETN_Mm LTR ERVK 0 322 11 1 1146 317 300 56 0 chr17 73632264 73632354 -21640297 + MIR SINE MIR 84 178 -84 1 1146 455 289 42 62 chr17 73632462 73632654 -21639997 - MTEa LTR MaLR -176 203 16 1 1146 494 286 21 84 chr17 73632832 73633069 -21639582 - L1MD LINE L1 -1401 4745 4524 1 1146 259 174 4 47 chr17 73633148 73633222 -21639429 - L1MD LINE L1 -2870 3273 3201 1 1146 918 135 0 0 chr17 73633223 73633401 -21639250 + (TCCC)n Simple_repeat Simple_repeat 1 178 0 1 1146 500 240 20 3 chr17 73633413 73633523 -21639128 - B1F1 SINE Alu -8 109 1 1 1146 1180 312 55 25 chr17 73633539 73634409 -21638242 - L1MD LINE L1 -2979 3167 2272 1 1146 453 302 123 27 chr17 73634473 73634660 -21637991 + B4A SINE B4 15 219 -73 1 1146 1139 288 151 10 chr17 73634692 73635096 -21637555 + Lx9 LINE L1 6397 6857 -787 1 1146 428 0 19 0 chr17 73635096 73635148 -21637503 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1146 195 42 0 0 chr17 73635279 73635303 -21637348 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1146 634 172 34 8 chr17 73635436 73635553 -21637098 + B1_Mus1 SINE Alu 12 131 -17 1 1146 1191 68 0 0 chr17 73635559 73635705 -21636946 + B1_Mus2 SINE Alu 1 146 -1 1 1146 459 52 0 0 chr17 73636205 73636263 -21636388 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 1146 784 55 31 8 chr17 73636496 73636624 -21636027 + (GA)n Simple_repeat Simple_repeat 2 132 0 1 1146 328 20 41 0 chr17 73636756 73636805 -21635846 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1146 405 266 239 0 chr17 73636810 73636923 -21635728 - B3A SINE B2 -56 142 3 1 1146 10064 84 1 9 chr17 73637010 73638412 -21634239 - L1_Mm LINE L1 -1639 4244 2854 1 1146 8793 104 2 1 chr17 73638409 73639646 -21633005 + L1_Mm LINE L1 4283 5520 -363 1 1146 4401 64 4 0 chr17 73639646 73640194 -21632457 + L1_Mus1 LINE L1 6018 6567 0 1 1146 268 320 76 53 chr17 73640307 73640439 -21632212 - MLT1B LTR MaLR -245 145 11 1 1146 818 156 7 33 chr17 73640411 73640563 -21632088 + URR1A DNA MER1_type 79 226 0 1 1146 852 10 0 0 chr17 73641000 73641097 -21631554 + (TTCC)n Simple_repeat Simple_repeat 1 97 0 1 1146 347 301 68 150 chr17 73641101 73641495 -21631156 - L1MCc LINE L1 -4499 2538 2177 1 1146 427 124 68 14 chr17 73641704 73641924 -21630727 + (TG)n Simple_repeat Simple_repeat 1 231 0 2 1146 248 271 261 8 chr17 73641966 73642096 -21630555 - RSINE1 SINE B4 -1 164 2 2 1146 426 274 77 52 chr17 73642162 73642494 -21630157 - L1MCc LINE L1 -5324 1804 1372 1 1146 214 146 61 0 chr17 73642494 73642576 -21630075 + (TCTA)n Simple_repeat Simple_repeat 3 89 0 2 1146 314 284 198 21 chr17 73642681 73642868 -21629783 - L1MCc LINE L1 -5141 1282 1063 1 1146 552 68 0 0 chr17 73642914 73642987 -21629664 + (TG)n Simple_repeat Simple_repeat 2 74 0 2 1146 422 211 0 0 chr17 73643407 73643478 -21629173 - B3 SINE B2 -144 72 2 2 1146 708 217 136 45 chr17 73643505 73643703 -21628948 + B3 SINE B2 1 216 0 2 1146 186 319 0 60 chr17 73643848 73643898 -21628753 - L4 LINE RTE -844 1185 1139 2 1146 486 0 0 0 chr17 73644411 73644465 -21628186 + (GA)n Simple_repeat Simple_repeat 1 54 0 2 1146 1422 178 58 0 chr17 73645549 73645808 -21626843 - ORR1C1 LTR MaLR -8 370 97 2 1146 205 299 14 82 chr17 73646708 73646781 -21625870 - MIRb SINE MIR -153 115 48 2 1146 580 171 78 0 chr17 73646788 73646917 -21625734 + RMER4B LTR ERVK 1 139 -446 2 1146 189 0 0 0 chr17 73646917 73646938 -21625713 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 1146 195 125 0 0 chr17 73647239 73647279 -21625372 + (C)n Simple_repeat Simple_repeat 1 40 0 2 1146 460 260 26 172 chr17 73647280 73647512 -21625139 + RMER4B LTR ERVK 342 588 -23 2 1146 1059 153 75 14 chr17 73647583 73647795 -21624856 + URR1B DNA MER1_type 1 225 0 2 1146 532 301 61 14 chr17 73648720 73648932 -21623719 - L1MC1 LINE L1 -2 6331 6110 2 1146 182 278 162 20 chr17 73648971 73649070 -21623581 - MIRc SINE MIR -126 142 30 2 1146 603 133 0 0 chr17 73650265 73650393 -21622258 + (GA)n Simple_repeat Simple_repeat 2 129 0 2 1146 190 349 86 33 chr17 73650507 73650658 -21621993 + MIRb SINE MIR 21 179 -89 2 1146 259 300 131 16 chr17 73650693 73650815 -21621836 + LTR41 LTR ERVL 19 154 -614 2 1146 715 253 17 23 chr17 73652340 73652514 -21620137 + MERVL-int LTR ERVL 3425 3597 -1888 2 1146 500 216 20 10 chr17 73652518 73652616 -21620035 + MERVL-int LTR ERVL 3752 3850 -1911 2 1146 364 370 67 12 chr17 73654204 73654368 -21618283 + LTR33B LTR ERVL 8 180 -323 2 1146 742 285 56 73 chr17 73655085 73655450 -21617201 + ORR1E LTR MaLR 3 379 0 2 1146 691 127 24 0 chr17 73655588 73655714 -21616937 + G-rich Low_complexity Low_complexity 6 134 0 2 1146 475 308 4 37 chr17 73657062 73657308 -21615343 - HAL1 LINE L1 -302 2205 1968 2 1146 733 175 34 40 chr17 73657650 73657799 -21614852 - B1_Mur3 SINE Alu -1 148 1 2 1146 641 135 0 0 chr17 73657813 73657902 -21614749 - B2_Mm2 SINE B2 -106 89 1 2 1146 988 278 139 0 chr17 73658620 73658994 -21613657 + Lx9 LINE L1 7218 7643 -1 2 1146 285 273 13 0 chr17 73659140 73659217 -21613434 + L1MB7 LINE L1 3951 4028 -2118 2 1146 1439 268 139 54 chr17 73659214 73659711 -21612940 + Lx8 LINE L1 6935 7473 0 2 1146 327 336 57 32 chr17 73660274 73660343 -21612308 + L1MB7 LINE L1 4909 4975 -1171 2 1146 207 0 0 0 chr17 73660343 73660366 -21612285 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 2 1146 327 336 57 32 chr17 73660366 73660542 -21612109 + L1MB7 LINE L1 4976 5160 -986 2 1146 241 188 15 59 chr17 73660613 73660681 -21611970 + Lx7 LINE L1 7614 7678 -18 2 1146 907 307 95 37 chr17 73660675 73661518 -21611133 + L1MB7 LINE L1 5157 6065 -119 2 1146 333 47 0 0 chr17 73661600 73661643 -21611008 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1146 391 271 81 16 chr17 73661643 73661757 -21610894 - B1F1 SINE Alu -22 127 5 2 1146 233 214 35 18 chr17 73661800 73661857 -21610794 + L1MB7 LINE L1 6121 6178 0 2 143 266 322 146 15 chr17 73662337 73662605 -21610046 - L2 LINE L2 -1457 1962 1660 2 1147 1201 260 44 77 chr17 73663288 73663676 -21608975 + MTEa LTR MaLR 1 375 -4 2 1147 338 196 9 0 chr17 73663812 73663924 -21608727 + CT-rich Low_complexity Low_complexity 2 114 0 2 1147 827 249 33 23 chr17 73664786 73665000 -21607651 - B4A SINE B4 -75 217 2 2 1147 259 132 0 0 chr17 73665162 73665200 -21607451 - tRNA-Tyr-TAC tRNA tRNA -38 38 1 2 1147 31 0 0 0 chr17 73666103 73666134 -21606517 + AT_rich Low_complexity Low_complexity 1 31 0 2 1147 1201 240 109 34 chr17 73666569 73666918 -21605733 + MTE2a LTR MaLR 1 375 -4 2 1147 3339 18 39 0 chr17 73667996 73668377 -21604274 - MTA_Mm LTR MaLR 0 396 1 2 1147 9257 33 5 2 chr17 73668377 73669472 -21603179 - MTA_Mm-int LTR MaLR 0 1098 1 2 1147 3299 24 39 0 chr17 73669472 73669853 -21602798 - MTA_Mm LTR MaLR 0 396 1 2 1147 384 288 40 106 chr17 73670311 73670509 -21602142 + MER5A DNA MER1_type 1 185 -4 2 1147 273 344 39 13 chr17 73670730 73670886 -21601765 + MIRc SINE MIR 109 268 0 2 1147 264 132 35 35 chr17 73671008 73671094 -21601557 + CT-rich Low_complexity Low_complexity 1 86 0 2 1147 343 258 152 76 chr17 73671715 73671925 -21600726 + CYRA11_Mm Unknown Y-chromosome 159 384 -233 2 1147 804 181 163 11 chr17 73671737 73671927 -21600724 - URR1B DNA MER1_type -6 219 1 2 1147 745 306 9 19 chr17 73671948 73672161 -21600490 + MIR SINE MIR 12 222 -40 2 1147 473 278 0 9 chr17 73673071 73673180 -21599471 - PB1D10 SINE Alu -9 108 1 2 1147 264 327 66 12 chr17 73675337 73675504 -21597147 + MIRc SINE MIR 25 200 -68 2 1147 21 0 0 0 chr17 73675770 73675791 -21596860 + GC_rich Low_complexity Low_complexity 1 21 0 2 1147 1342 89 11 0 chr17 73677277 73677457 -21595194 - B2_Mm1t SINE B2 -11 182 1 2 1147 282 264 62 18 chr17 73678034 73678146 -21594505 - L2b LINE L2 -1 3374 3258 2 1147 263 337 99 0 chr17 73680002 73680117 -21592534 + L2b LINE L2 3079 3202 -173 2 1147 291 119 0 0 chr17 73680779 73680821 -21591830 - RMER30 DNA MER1_type -151 51 10 2 1147 700 291 40 0 chr17 73684012 73684211 -21588440 - B3 SINE B2 -9 207 1 2 1147 218 229 39 66 chr17 73685151 73685293 -21587358 + MIRc SINE MIR 91 233 -43 2 1147 248 316 111 26 chr17 73685496 73685613 -21587038 + MIR3 SINE MIR 31 157 -51 2 1147 263 333 22 22 chr17 73686085 73686174 -21586477 - MER5A DNA MER1_type -36 153 65 2 1147 703 239 62 11 chr17 73686299 73686477 -21586174 + B3A SINE B2 1 187 -11 2 1147 229 284 61 12 chr17 73686873 73686955 -21585696 - LTR52 LTR ERVL -46 375 290 2 1147 411 21 0 0 chr17 73687041 73687089 -21585562 + (TC)n Simple_repeat Simple_repeat 2 49 0 2 1147 710 240 109 22 chr17 73687109 73687177 -21585474 - B4 SINE B4 -1 291 214 2 1147 324 48 0 0 chr17 73687177 73687219 -21585432 + (TTGTG)n Simple_repeat Simple_repeat 3 44 0 2 1147 710 240 109 22 chr17 73687219 73687333 -21585318 - B4 SINE B4 -79 213 93 2 1147 337 310 8 34 chr17 73689658 73689775 -21582876 - Lx7 LINE L1 -503 7193 7080 2 1147 474 329 0 6 chr17 73690650 73690809 -21581842 - L1MA5A LINE L1 -427 5870 5713 2 1147 292 312 35 14 chr17 73692798 73692941 -21579710 + B1F1 SINE Alu 1 146 -3 2 1147 263 234 0 30 chr17 73692947 73693013 -21579638 + ID4 SINE ID 7 70 -13 2 1147 249 219 31 0 chr17 73693221 73693285 -21579366 + CT-rich Low_complexity Low_complexity 5 70 0 2 1147 1442 11 0 11 chr17 73694698 73694789 -21577862 + (GAA)n Simple_repeat Simple_repeat 2 92 0 2 1147 1252 70 6 0 chr17 73694789 73695145 -21577506 + (GGA)n Simple_repeat Simple_repeat 1 357 0 2 1147 1442 11 0 11 chr17 73695145 73695226 -21577425 + (GAA)n Simple_repeat Simple_repeat 3 83 0 2 1147 256 324 78 38 chr17 73695993 73696124 -21576527 - MIR SINE MIR -88 174 40 2 1147 265 271 58 23 chr17 73697195 73697282 -21575369 + MER103 DNA DNA 64 153 -13 2 1147 291 281 118 47 chr17 73697435 73697562 -21575089 - MER117 DNA MER1_type -53 144 9 2 1147 190 298 21 0 chr17 73697848 73697895 -21574756 - L2c LINE L2 0 3387 3340 2 1147 1094 70 7 40 chr17 73698177 73698327 -21574324 + B1_Mm SINE Alu 2 146 -1 2 1147 951 9 0 0 chr17 73698342 73698450 -21574201 + (GAA)n Simple_repeat Simple_repeat 2 109 0 2 1147 250 294 44 35 chr17 73698543 73698656 -21573995 + MIR3 SINE MIR 43 156 -52 2 1147 456 35 0 0 chr17 73698847 73698905 -21573746 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1147 718 280 106 25 chr17 73699053 73699375 -21573276 + ORR1D1 LTR MaLR 27 374 0 2 1147 227 108 27 0 chr17 73699398 73699435 -21573216 + MLT1J LTR MaLR 419 456 -56 2 1147 209 0 212 0 chr17 73699743 73699809 -21572842 + (CAGGC)n Simple_repeat Simple_repeat 4 83 0 2 1147 441 0 0 0 chr17 73699991 73700040 -21572611 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1147 333 0 0 0 chr17 73700040 73700076 -21572575 + (GA)n Simple_repeat Simple_repeat 1 37 0 2 1147 802 186 4 8 chr17 73703345 73703615 -21569036 + GA-rich Low_complexity Low_complexity 1 268 0 2 1147 332 176 48 18 chr17 73703624 73703792 -21568859 + (CAGAGA)n Simple_repeat Simple_repeat 6 178 0 2 1147 569 113 49 0 chr17 73703771 73703913 -21568738 + (CAGA)n Simple_repeat Simple_repeat 4 152 0 2 1147 272 296 109 15 chr17 73704443 73704580 -21568071 + MIR3 SINE MIR 52 201 -7 2 1147 698 157 15 0 chr17 73705072 73705206 -21567445 + GA-rich Low_complexity Low_complexity 2 137 0 2 1147 696 111 0 0 chr17 73705749 73705875 -21566776 + (GA)n Simple_repeat Simple_repeat 1 126 0 2 1147 9748 34 39 40 chr17 73706342 73706677 -21565974 + L1Md_F2 LINE L1 4500 4850 -1732 2 1147 233 264 41 71 chr17 73706677 73706775 -21565876 - RMER20A LTR ERVK -236 280 186 2 1147 9748 34 39 40 chr17 73706775 73708401 -21564250 + L1Md_F2 LINE L1 4851 6557 -25 2 1147 405 0 0 0 chr17 73708403 73708448 -21564203 + (TAA)n Simple_repeat Simple_repeat 1 45 0 2 1147 212 345 0 17 chr17 73708530 73708589 -21564062 + L2b LINE L2 3312 3369 -6 2 1147 965 268 69 26 chr17 73708954 73709260 -21563391 + MER2 DNA MER2_type 2 320 -25 2 1147 590 217 69 8 chr17 73709464 73709594 -21563057 - B1_Mur1 SINE Alu -1 148 11 2 1147 294 188 0 15 chr17 73709893 73709958 -21562693 + RMER21A LTR ERV1 833 896 -51 2 1147 271 284 72 36 chr17 73711175 73711314 -21561337 + MIRb SINE MIR 54 197 -71 2 1147 324 0 0 0 chr17 73711547 73711583 -21561068 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1147 477 0 0 0 chr17 73711881 73711934 -21560717 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1147 461 299 9 9 chr17 73711936 73712044 -21560607 - RSINE1 SINE B4 -25 140 33 3 1147 191 250 0 14 chr17 73712400 73712469 -21560182 + (TATATG)n Simple_repeat Simple_repeat 3 70 0 3 1147 512 280 50 115 chr17 73712505 73712687 -21559964 - B3A SINE B2 -1 192 23 3 1147 474 18 0 0 chr17 73712752 73712807 -21559844 + (GA)n Simple_repeat Simple_repeat 1 55 0 3 1147 320 312 109 0 chr17 73713159 73713297 -21559354 - RSINE1 SINE B4 -10 155 3 3 1147 2241 166 3 5 chr17 73713389 73713744 -21558907 - Lx9 LINE L1 -674 6970 6616 3 1147 405 0 0 0 chr17 73713744 73713789 -21558862 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 1147 2241 166 3 5 chr17 73713789 73713803 -21558848 - Lx9 LINE L1 -1029 6615 6603 3 1147 477 95 158 0 chr17 73713794 73713889 -21558762 + Lx9 LINE L1 7533 7642 -2 3 1147 358 335 24 40 chr17 73714531 73714860 -21557791 + L1M5 LINE L1 4408 4731 -1415 3 1147 371 65 32 0 chr17 73715092 73715154 -21557497 + (CAAA)n Simple_repeat Simple_repeat 2 65 0 3 1147 23 0 0 0 chr17 73715514 73715537 -21557114 + AT_rich Low_complexity Low_complexity 1 23 0 3 1147 315 222 0 60 chr17 73717987 73718054 -21554597 + ID4 SINE ID 5 67 -16 3 1147 3426 211 68 21 chr17 73718068 73718190 -21554461 + Lx9 LINE L1 6797 6923 -721 3 1147 4789 127 36 85 chr17 73718190 73719142 -21553509 - RMER17A2 LTR ERVK 0 906 2 3 1147 3426 211 68 21 chr17 73719142 73719829 -21552822 + Lx9 LINE L1 6924 7644 0 3 1147 987 257 0 37 chr17 73719869 73720087 -21552564 + B4 SINE B4 82 291 -1 3 1147 440 316 129 62 chr17 73720588 73720990 -21551661 + L1M5 LINE L1 2976 3404 -2742 3 1147 12410 117 53 185 chr17 73721181 73723833 -21548818 + L1_Mur2 LINE L1 530 3276 -2601 3 1147 2223 182 50 84 chr17 73723833 73724392 -21548259 + RMER13B LTR ERVK 5 653 -236 3 1147 12410 117 53 185 chr17 73724392 73724436 -21548215 + L1_Mur2 LINE L1 3277 3321 -2556 3 1147 734 189 61 6 chr17 73724436 73724601 -21548050 + RMER13B LTR ERVK 685 858 -2 3 1147 12410 117 53 185 chr17 73724601 73724915 -21547736 + L1_Mur2 LINE L1 3322 3649 -2228 3 1147 771 40 0 0 chr17 73724915 73725014 -21547637 + (GA)n Simple_repeat Simple_repeat 2 100 0 3 1147 12410 115 61 224 chr17 73725014 73725714 -21546937 + L1_Mur2 LINE L1 3650 4360 -1517 3 1147 7886 132 26 4 chr17 73725699 73726873 -21545778 + Lx4A LINE L1 5679 6877 -181 3 1147 569 259 73 93 chr17 73727580 73727882 -21544769 + MLT2B1 LTR ERVL 1 296 -224 3 1147 284 324 10 0 chr17 73727889 73727991 -21544660 + MLT2B1 LTR ERVL 419 521 -46 3 1147 583 296 76 19 chr17 73728654 73728965 -21543686 - ORR1E LTR MaLR -30 349 1 3 1147 4817 43 2 0 chr17 73730299 73730875 -21541776 + L1Md_F2 LINE L1 5994 6570 -12 3 1147 406 365 41 83 chr17 73732608 73732922 -21539729 - L2b LINE L2 0 3375 3075 3 1147 232 359 28 19 chr17 73733816 73733924 -21538727 - Charlie20a DNA Charlie -11 796 688 3 1147 759 351 62 29 chr17 73734308 73734886 -21537765 - Charlie20a DNA Charlie -205 602 6 3 1147 214 374 21 35 chr17 73734899 73735043 -21537608 + MIRb SINE MIR 127 268 0 3 1147 613 298 134 11 chr17 73735322 73735597 -21537054 - Lx8 LINE L1 0 7473 7165 3 1147 245 216 75 64 chr17 73736184 73736278 -21536373 - MLT1C LTR MaLR 0 467 373 3 1147 336 233 35 0 chr17 73736681 73736767 -21535884 + L1ME2 LINE L1 5835 5923 -241 3 1147 450 271 68 28 chr17 73737314 73737633 -21535018 - L1M5 LINE L1 -725 5455 5129 3 1147 574 189 29 0 chr17 73737883 73738058 -21534593 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1147 421 261 96 25 chr17 73739030 73739187 -21533464 + MT2A LTR ERVL 366 533 0 3 1147 315 309 13 51 chr17 73739196 73739353 -21533298 + MER3 DNA MER1_type 57 207 -2 3 1147 314 316 11 33 chr17 73740197 73740377 -21532274 + GA-rich Low_complexity Low_complexity 2 177 0 3 1147 1225 271 34 8 chr17 73740621 73740974 -21531677 - MTE2b LTR MaLR -5 374 13 3 1147 22 0 0 0 chr17 73742310 73742332 -21530319 + AT_rich Low_complexity Low_complexity 1 22 0 3 1147 227 270 34 17 chr17 73742408 73742525 -21530126 + (CAGAGA)n Simple_repeat Simple_repeat 5 123 0 3 1147 444 19 0 0 chr17 73744795 73744848 -21527803 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 1147 604 281 122 44 chr17 73744932 73745137 -21527514 + ID_B1 SINE B4 1 221 -3 3 1147 576 116 0 0 chr17 73745522 73745617 -21527034 + (TC)n Simple_repeat Simple_repeat 2 96 0 3 1147 1300 268 8 53 chr17 73745731 73746109 -21526542 + MTE2a LTR MaLR 19 379 0 3 1147 307 286 62 31 chr17 73746413 73746543 -21526108 + LTR16D LTR ERVL 518 651 0 3 1147 657 347 40 28 chr17 73747533 73747782 -21524869 + B4A SINE B4 19 270 -22 3 1147 198 103 0 0 chr17 73747787 73747816 -21524835 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1147 761 65 9 0 chr17 73747919 73748027 -21524624 + (GGAGAA)n Simple_repeat Simple_repeat 3 111 0 3 1147 232 211 19 0 chr17 73748197 73748249 -21524402 - Lx7 LINE L1 -5 7691 7639 3 1147 2471 259 43 89 chr17 73750863 73751755 -21520896 - RMER1C Other Other -4 1338 488 3 1147 670 234 0 14 chr17 73752057 73752204 -21520447 + B1_Mur2 SINE Alu 5 149 0 3 1147 801 0 0 0 chr17 73753047 73753136 -21519515 + (TTC)n Simple_repeat Simple_repeat 3 91 0 3 1147 473 191 9 0 chr17 73753189 73753299 -21519352 + (TA)n Simple_repeat Simple_repeat 2 112 0 3 1147 33 56 0 0 chr17 73753412 73753466 -21519185 + AT_rich Low_complexity Low_complexity 1 54 0 3 1147 270 311 133 0 chr17 73753748 73753883 -21518768 - L1M5 LINE L1 -365 5759 5607 3 1147 207 100 0 0 chr17 73753915 73753945 -21518706 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1147 231 390 12 0 chr17 73753959 73754041 -21518610 - RSINE1 SINE B4 -4 161 79 3 1147 351 308 139 46 chr17 73754265 73754524 -21518127 - B4A SINE B4 -8 284 2 3 1147 198 167 0 0 chr17 73754961 73754997 -21517654 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1147 333 0 0 0 chr17 73754997 73755034 -21517617 + (TC)n Simple_repeat Simple_repeat 1 37 0 3 1147 231 36 0 0 chr17 73755034 73755061 -21517590 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1147 213 333 9 54 chr17 73755264 73755375 -21517276 + L2c LINE L2 3263 3368 -19 3 1147 220 298 18 63 chr17 73756123 73756234 -21516417 - L2c LINE L2 -19 3368 3263 3 1147 1102 146 9 74 chr17 73756251 73756480 -21516171 - URR1A DNA MER1_type -12 214 1 3 1147 283 273 28 66 chr17 73756759 73756865 -21515786 - MLT1A0 LTR MaLR -18 347 246 3 1147 1076 236 84 87 chr17 73757168 73757548 -21515103 - MTE2a LTR MaLR 0 379 1 3 1147 24 0 0 0 chr17 73758526 73758550 -21514101 + AT_rich Low_complexity Low_complexity 1 24 0 3 1147 238 347 48 20 chr17 73758625 73758772 -21513879 - MER5A DNA MER1_type 0 189 39 3 1147 1167 194 13 35 chr17 73758873 73759103 -21513548 + URR1B DNA MER1_type 1 225 0 3 1147 246 286 0 115 chr17 73759975 73760062 -21512589 - LTR16A LTR ERVL -272 179 103 3 1147 182 174 85 21 chr17 73760303 73760350 -21512301 + MIRm SINE MIR 124 173 -103 3 1147 306 115 0 0 chr17 73761700 73761752 -21510899 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1147 702 297 39 57 chr17 73761755 73762037 -21510614 - B4 SINE B4 -14 278 2 3 1147 1422 57 7 7 chr17 73762188 73762474 -21510177 + (GGGAGA)n Simple_repeat Simple_repeat 1 286 0 3 1147 335 288 9 26 chr17 73762601 73762715 -21509936 + MLT1B LTR MaLR 25 136 -254 3 1147 299 345 53 6 chr17 73762814 73762983 -21509668 + MLT1B LTR MaLR 291 467 0 3 1147 486 0 0 0 chr17 73763275 73763329 -21509322 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 1147 1270 271 109 31 chr17 73764316 73764905 -21507746 + L1MB3 LINE L1 5318 5952 -231 3 1147 387 209 226 9 chr17 73765059 73765165 -21507486 - RSINE1 SINE B4 -36 129 1 3 1147 877 212 103 10 chr17 73765518 73765713 -21506938 + B3 SINE B2 3 215 -1 3 1147 987 152 6 6 chr17 73765776 73765942 -21506709 - URR1B DNA MER1_type -57 168 3 3 1147 207 0 0 0 chr17 73766133 73766156 -21506495 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 3 1147 342 67 0 0 chr17 73767168 73767213 -21505438 + (GGA)n Simple_repeat Simple_repeat 3 47 0 3 1147 3580 161 24 55 chr17 73767351 73768056 -21504595 - Lx4B LINE L1 -4 7054 6372 3 1147 8506 35 1 0 chr17 73768064 73769690 -21502961 - L1Md_F2 LINE L1 0 6582 4956 3 1147 5779 139 32 12 chr17 73769690 73771104 -21501547 - Lx4B LINE L1 -671 6387 4929 3 1147 2006 64 38 0 chr17 73771104 73771369 -21501282 + L1_Mus1 LINE L1 6293 6567 0 3 1147 25779 151 19 9 chr17 73771441 73776583 -21496068 - L1VL2 LINE L1 -78 5805 612 3 1147 2144 178 38 7 chr17 73776580 73777000 -21495651 - Lx4B LINE L1 -1533 4344 3912 3 1147 2352 158 92 14 chr17 73776998 73777694 -21494957 - Lx4B LINE L1 -4194 1683 893 3 1147 368 264 99 43 chr17 73777940 73778102 -21494549 - B3A SINE B2 0 198 28 3 1147 369 43 0 0 chr17 73778115 73778162 -21494489 + (TTTA)n Simple_repeat Simple_repeat 1 47 0 3 1147 6226 182 52 40 chr17 73778162 73778374 -21494277 - Lx5 LINE L1 -15 7035 6855 3 1147 2238 207 58 39 chr17 73778374 73778892 -21493759 + RLTR11A LTR ERVK 1 528 0 3 1147 6226 182 52 40 chr17 73778892 73779933 -21492718 - Lx5 LINE L1 -196 6854 5767 3 1147 785 277 142 20 chr17 73780434 73780828 -21491823 + L1MB2 LINE L1 5570 6011 -160 3 1147 460 219 56 24 chr17 73780842 73780968 -21491683 + L1MB2 LINE L1 6054 6183 0 3 1147 970 263 57 35 chr17 73781224 73781591 -21491060 + MTE2b LTR MaLR 1 375 -4 3 1147 244 316 68 8 chr17 73782681 73782799 -21489852 + MIRm SINE MIR 20 144 -132 3 1147 2297 180 36 15 chr17 73783262 73783674 -21488977 - MTC LTR MaLR 0 421 1 3 1147 1340 268 96 38 chr17 73783903 73784350 -21488301 - Lx9 LINE L1 -704 6940 6468 3 1147 925 327 71 38 chr17 73784353 73784799 -21487852 + Lx8 LINE L1 6875 7324 -149 3 1147 504 32 0 0 chr17 73784799 73784861 -21487790 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 1147 925 327 71 38 chr17 73784861 73784993 -21487658 + Lx8 LINE L1 7325 7472 -1 3 1147 207 0 0 0 chr17 73784998 73785021 -21487630 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1147 22 56 0 0 chr17 73786578 73786614 -21486037 + AT_rich Low_complexity Low_complexity 1 36 0 3 1147 237 258 42 42 chr17 73786701 73786867 -21485784 + L1M5 LINE L1 3145 3310 -2836 3 1147 861 268 103 68 chr17 73787263 73787603 -21485048 + ORR1E LTR MaLR 4 355 -4 3 1147 534 266 43 49 chr17 73787714 73787876 -21484775 - RSINE1 SINE B4 -1 164 4 3 1147 419 320 39 46 chr17 73788262 73788339 -21484312 + L1MB5 LINE L1 4 78 -6464 3 1147 856 174 208 0 chr17 73788339 73788517 -21484134 - B3 SINE B2 -1 215 1 4 1147 419 320 39 46 chr17 73788517 73788724 -21483927 + L1MB5 LINE L1 79 286 -6256 3 1147 403 288 205 60 chr17 73788899 73789395 -21483256 + L1MB5 LINE L1 2616 3183 -3461 3 1147 281 217 12 0 chr17 73789395 73789478 -21483173 + (CA)n Simple_repeat Simple_repeat 1 84 0 4 1147 2864 116 5 10 chr17 73789486 73789895 -21482756 - MTB_Mm LTR MaLR 0 407 1 4 1147 271 263 34 62 chr17 73789910 73790056 -21482595 + L1MB5 LINE L1 3794 3935 -2709 3 1147 952 303 50 22 chr17 73790064 73790425 -21482226 + MTEa LTR MaLR 1 371 -8 4 1147 457 261 75 30 chr17 73790448 73790661 -21481990 + L1MB5 LINE L1 4296 4520 -2124 3 1147 834 254 32 24 chr17 73790713 73790959 -21481692 + L1MB5 LINE L1 5308 5555 -1089 3 143 27534 141 7 8 chr17 73790982 73796925 -21475726 - L1_Mus4 LINE L1 -3 6633 704 4 1148 22 0 0 0 chr17 73797978 73798000 -21474651 + AT_rich Low_complexity Low_complexity 1 22 0 4 1148 182 91 30 0 chr17 73798054 73798087 -21474564 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1148 297 195 138 71 chr17 73798123 73798333 -21474318 + L1MB5 LINE L1 5601 5824 -820 3 1148 964 257 154 28 chr17 73798375 73798975 -21473676 + L1MB5 LINE L1 5802 6482 -190 3 1148 588 325 80 23 chr17 73799205 73799593 -21473058 + L1M5 LINE L1 5254 5663 -461 4 1148 477 0 0 0 chr17 73799801 73799854 -21472797 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1148 190 56 27 27 chr17 73799907 73799944 -21472707 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 1148 426 316 108 10 chr17 73800307 73800502 -21472149 + RMER15 LTR ERVL 362 575 0 4 1148 229 303 91 0 chr17 73802268 73802367 -21470284 - MLT1H2 LTR MaLR -326 163 56 4 1148 1263 94 0 0 chr17 73802431 73802611 -21470040 + (TTC)n Simple_repeat Simple_repeat 1 180 0 4 1148 498 146 0 0 chr17 73802891 73802987 -21469664 + (TG)n Simple_repeat Simple_repeat 1 96 0 4 1148 25 0 0 0 chr17 73803347 73803372 -21469279 + AT_rich Low_complexity Low_complexity 1 25 0 4 1148 238 262 16 0 chr17 73803456 73803578 -21469073 + (TA)n Simple_repeat Simple_repeat 1 124 0 4 1148 421 319 79 7 chr17 73803896 73804186 -21468465 - L1MA4 LINE L1 -7 6293 5983 4 1148 228 279 12 25 chr17 73804278 73804359 -21468292 + Charlie15a DNA MER1_type 125 204 -20 4 1148 431 258 37 63 chr17 73806057 73806247 -21466404 + RMER15 LTR ERVL 341 525 -50 4 1148 231 254 47 16 chr17 73807028 73807092 -21465559 - MER3 DNA MER1_type -124 85 20 4 1148 328 302 49 57 chr17 73807193 73807316 -21465335 + MTEa LTR MaLR 3 124 -255 4 1148 769 265 33 24 chr17 73807353 73807580 -21465071 + MTEa LTR MaLR 2 222 -157 4 1148 210 105 0 0 chr17 73807606 73807644 -21465007 + (TCTCTG)n Simple_repeat Simple_repeat 3 40 0 4 1148 477 0 0 0 chr17 73807661 73807714 -21464937 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1148 421 194 82 9 chr17 73807715 73807840 -21464811 + MTEa LTR MaLR 220 367 -12 4 1148 612 202 0 0 chr17 73809218 73809322 -21463329 + PB1D9 SINE Alu 1 104 -16 4 1148 522 0 0 0 chr17 73809335 73809393 -21463258 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 1148 275 291 78 0 chr17 73810694 73810797 -21461854 + B1F SINE Alu 37 147 -2 4 1148 249 355 13 0 chr17 73810804 73810880 -21461771 + ID2 SINE ID 2 78 -5 4 1148 8343 43 1 6 chr17 73811133 73812134 -21460517 - L1Md_F2 LINE L1 0 6582 5587 4 1148 1154 267 93 34 chr17 73812149 73812724 -21459927 - L1MB3 LINE L1 -34 6149 5541 4 1148 364 245 14 0 chr17 73812771 73812914 -21459737 + CT-rich Low_complexity Low_complexity 2 146 0 4 1148 209 59 0 56 chr17 73813546 73813582 -21459069 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1148 197 355 64 32 chr17 73813832 73813957 -21458694 + MIRb SINE MIR 41 169 -99 4 1148 185 260 54 63 chr17 73814080 73814191 -21458460 + L2 LINE L2 2873 2982 -437 4 1148 785 264 24 9 chr17 73814342 73814552 -21458099 + B4 SINE B4 1 213 -79 4 1148 258 100 0 123 chr17 73814577 73814634 -21458017 + PB1D9 SINE Alu 10 59 -61 4 1148 752 146 0 35 chr17 73814634 73814804 -21457847 + GA-rich Low_complexity Low_complexity 1 164 0 4 1148 394 212 88 29 chr17 73814806 73814908 -21457743 + B1_Mur4 SINE Alu 43 150 0 4 1148 516 231 0 0 chr17 73814980 73815136 -21457515 + (CA)n Simple_repeat Simple_repeat 1 156 0 4 1148 612 203 0 0 chr17 73815150 73815515 -21457136 + (CA)n Simple_repeat Simple_repeat 1 365 0 4 1148 266 143 41 0 chr17 73815519 73815568 -21457083 - MER4B-int LTR ERV1 -5562 1196 1146 4 1148 867 173 0 0 chr17 73815568 73816042 -21456609 + (CA)n Simple_repeat Simple_repeat 1 474 0 4 1148 206 105 0 26 chr17 73816483 73816522 -21456129 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 4 1148 240 342 68 26 chr17 73816757 73817021 -21455630 - L1MEf LINE L1 -4955 1245 971 4 1148 6681 60 2 15 chr17 73817073 73817486 -21455165 - L1_Mus2 LINE L1 0 6566 6164 4 1148 2209 124 14 203 chr17 73817486 73818072 -21454579 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1148 6681 60 2 15 chr17 73818072 73818513 -21454138 - L1_Mus2 LINE L1 -403 6163 5723 4 1148 339 25 0 0 chr17 73818877 73818917 -21453734 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1148 388 308 27 20 chr17 73820027 73820173 -21452478 + B4 SINE B4 140 286 -6 4 1148 6409 209 55 19 chr17 73820439 73821700 -21450951 - Lx6 LINE L1 -11 7449 6144 4 1148 265 212 11 56 chr17 73821702 73821792 -21450859 + Lx6 LINE L1 6054 6139 -1321 4 1148 22 0 0 0 chr17 73821945 73821967 -21450684 + AT_rich Low_complexity Low_complexity 1 22 0 4 1148 516 105 0 0 chr17 73823581 73823657 -21448994 + (CACG)n Simple_repeat Simple_repeat 2 77 0 4 1148 280 328 40 8 chr17 73824853 73824979 -21447672 - ORR1E LTR MaLR -227 132 3 4 1148 1382 285 35 32 chr17 73824988 73825339 -21447312 - L1MB5 LINE L1 -111 6063 5706 4 1148 207 100 0 0 chr17 73825339 73825369 -21447282 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1148 1382 285 35 32 chr17 73825369 73825585 -21447066 - L1MB5 LINE L1 -469 5705 5494 4 1148 303 352 69 30 chr17 73826033 73826235 -21446416 + MIR SINE MIR 2 211 -51 4 1148 23 33 0 0 chr17 73827387 73827417 -21445234 + AT_rich Low_complexity Low_complexity 1 30 0 4 1148 225 0 0 0 chr17 73828939 73828964 -21443687 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1148 1218 185 46 0 chr17 73829429 73829645 -21443006 - URR1A DNA MER1_type 0 226 1 4 1148 246 311 48 32 chr17 73829704 73829830 -21442821 + HAL1 LINE L1 776 903 -1604 4 1148 680 289 146 22 chr17 73830148 73830470 -21442181 + HAL1 LINE L1 2041 2402 -105 4 1148 291 114 0 0 chr17 73830771 73830815 -21441836 + (CCCCCT)n Simple_repeat Simple_repeat 6 49 0 4 1148 834 271 27 88 chr17 73830821 73831116 -21441535 - B4A SINE B4 0 292 16 4 1148 189 315 66 44 chr17 73831172 73831308 -21441343 + MIRc SINE MIR 15 153 -115 4 1148 418 321 28 3 chr17 73832890 73833055 -21439596 + MIRb SINE MIR 25 195 -73 4 1148 351 313 70 94 chr17 73834300 73834501 -21438150 + RMER30 DNA MER1_type 7 202 0 4 1148 243 312 0 0 chr17 73834622 73834670 -21437981 - PB1D7 SINE Alu -11 109 62 4 1148 720 267 12 6 chr17 73835023 73835185 -21437466 + MLT1A0 LTR MaLR 5 167 -198 4 1148 333 163 0 0 chr17 73835198 73835290 -21437361 + (CATATA)n Simple_repeat Simple_repeat 4 95 0 4 1148 260 111 0 22 chr17 73835290 73835336 -21437315 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1148 392 307 35 9 chr17 73835393 73835508 -21437143 + MLT1A0 LTR MaLR 229 346 -19 4 1148 2408 152 13 3 chr17 73835514 73835896 -21436755 - ORR1B1 LTR MaLR -8 386 1 4 1148 384 352 14 7 chr17 73835986 73836132 -21436519 - MIRb SINE MIR -22 246 100 4 1148 375 60 0 0 chr17 73836380 73836430 -21436221 + (CACCC)n Simple_repeat Simple_repeat 2 51 0 4 1148 206 320 26 13 chr17 73837960 73838036 -21434615 - L2a LINE L2 -2 3424 3348 4 1148 2529 160 21 21 chr17 73838234 73838700 -21433951 + RMER4A LTR ERVK 1 466 0 4 1148 298 358 20 25 chr17 73838954 73839152 -21433499 + L1MEd LINE L1 549 745 -5374 4 1148 250 344 33 0 chr17 73839314 73839404 -21433247 - MER2 DNA MER2_type -15 330 238 4 1148 206 139 0 27 chr17 73839407 73839444 -21433207 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 1148 327 333 72 124 chr17 73839462 73839753 -21432898 - B4A SINE B4 -16 276 1 4 1148 685 317 59 34 chr17 73839756 73839994 -21432657 - MER2 DNA MER2_type -99 246 3 4 1148 22 56 0 0 chr17 73840027 73840063 -21432588 + AT_rich Low_complexity Low_complexity 1 36 0 4 1148 378 304 120 71 chr17 73841445 73841753 -21430898 + MLT1F2 LTR MaLR 19 341 -219 4 1148 349 148 188 0 chr17 73841759 73841837 -21430814 + MLT1E1A LTR MaLR 583 664 -16 4 1148 184 131 21 21 chr17 73842229 73842276 -21430375 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1148 739 302 43 73 chr17 73842308 73842382 -21430269 - B4 SINE B4 0 292 216 4 1148 212 59 29 0 chr17 73842382 73842416 -21430235 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1148 739 302 43 73 chr17 73842416 73842641 -21430010 - B4 SINE B4 -77 215 2 4 1148 414 0 0 0 chr17 73842712 73842758 -21429893 + (TC)n Simple_repeat Simple_repeat 2 47 0 4 1148 321 26 0 0 chr17 73842758 73842795 -21429856 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1148 671 210 34 0 chr17 73842796 73842915 -21429736 - RSINE1 SINE B4 -41 124 2 4 1148 223 298 73 21 chr17 73842918 73843014 -21429637 - MIRc SINE MIR -159 109 9 4 1148 479 350 38 6 chr17 73843912 73843946 -21428705 - RSINE1 SINE B4 0 165 126 4 1148 441 0 0 0 chr17 73843946 73843995 -21428656 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1148 479 350 38 6 chr17 73843995 73844118 -21428533 - RSINE1 SINE B4 -40 125 4 4 1148 394 325 12 12 chr17 73846717 73846879 -21425772 - MamRep4096 DNA hAT? -204 222 61 4 1148 282 111 0 22 chr17 73847064 73847110 -21425541 + B3A SINE B2 1 45 -153 4 1148 351 0 0 0 chr17 73847110 73847149 -21425502 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1148 430 223 21 21 chr17 73847409 73847505 -21425146 + BC1_Mm scRNA scRNA 3 98 -54 4 1148 555 268 81 23 chr17 73848088 73848260 -21424391 + MER20 DNA MER1_type 27 208 -11 4 1148 1056 111 12 30 chr17 73849405 73849572 -21423079 - URR1B DNA MER1_type -61 164 1 4 1148 514 302 4 119 chr17 73849572 73849640 -21423011 + CYRA11_Mm Unknown Y-chromosome 250 442 -175 4 1148 324 244 39 0 chr17 73856073 73856151 -21416500 - ID4 SINE ID 0 83 3 4 1148 254 338 143 6 chr17 73856367 73856528 -21416123 - L2 LINE L2 -889 2530 2348 4 1148 425 280 154 0 chr17 73857204 73857347 -21415304 + MER5A1 DNA MER1_type 2 166 0 4 1148 359 65 0 0 chr17 73857807 73857853 -21414798 - HAL1-3A_ME LINE L1 -838 2020 1975 4 1148 414 0 0 0 chr17 73857941 73857987 -21414664 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1148 380 20 20 0 chr17 73860301 73860350 -21412301 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 5 1148 727 264 11 43 chr17 73860502 73860688 -21411963 + B3A SINE B2 3 182 -16 5 1148 432 343 0 0 chr17 73861844 73861987 -21410664 + RSINE1 SINE B4 4 146 -19 5 1148 417 70 0 0 chr17 73862047 73862104 -21410547 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1148 441 0 0 0 chr17 73862104 73862152 -21410499 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 1148 468 305 58 29 chr17 73862546 73862718 -21409933 - MER97c DNA MER1_type? -913 177 1 5 1148 184 336 96 72 chr17 73863145 73863270 -21409381 + MIRc SINE MIR 76 203 -65 5 1148 521 288 6 59 chr17 73865683 73865853 -21406798 - RSINE1 SINE B4 -3 162 2 5 1148 238 316 226 40 chr17 73866137 73866460 -21406191 + MLT1A1 LTR MaLR 26 408 0 5 1148 997 293 137 37 chr17 73867114 73867575 -21405076 - MLT1E2 LTR MaLR -103 524 18 5 1148 275 333 98 9 chr17 73867639 73867751 -21404900 - MIRb SINE MIR -142 126 5 5 1148 919 290 39 14 chr17 73868602 73868885 -21403766 + MER2 DNA MER2_type 26 315 -30 5 1148 811 112 0 45 chr17 73869811 73869989 -21402662 + GA-rich Low_complexity Low_complexity 5 174 0 5 1148 222 386 106 7 chr17 73870317 73870458 -21402193 + L3 LINE CR1 4148 4302 -187 5 1148 188 132 71 54 chr17 73870665 73870721 -21401930 - L3 LINE CR1 -734 3755 3699 5 1148 892 276 85 72 chr17 73872456 73872831 -21399820 + MLT1B LTR MaLR 11 390 0 5 1148 756 85 0 0 chr17 73872837 73872955 -21399696 + (TG)n Simple_repeat Simple_repeat 1 118 0 5 1148 413 312 0 8 chr17 73875428 73875554 -21397097 + GA-rich Low_complexity Low_complexity 1 125 0 5 1148 1033 170 89 37 chr17 73876095 73876309 -21396342 - URR1A DNA MER1_type 0 226 2 5 1148 1096 231 23 55 chr17 73876559 73876907 -21395744 + L1MA5 LINE L1 5962 6298 -2 5 1148 820 222 36 55 chr17 73876981 73877200 -21395451 + B3 SINE B2 2 216 0 5 1148 1142 302 96 57 chr17 73877949 73878472 -21394179 + MER77 LTR ERVL 55 597 -10 5 1148 1002 284 66 49 chr17 73878857 73879205 -21393446 - ORR1E LTR MaLR 0 359 6 5 1148 501 354 31 44 chr17 73880325 73880526 -21392125 + Lx8 LINE L1 7140 7338 -135 5 1148 414 0 0 0 chr17 73880526 73880572 -21392079 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1148 411 218 182 0 chr17 73880572 73880682 -21391969 + B1_Mur2 SINE Alu 4 133 -16 5 1148 501 354 31 44 chr17 73880682 73880772 -21391879 + Lx8 LINE L1 7339 7427 -46 5 1148 212 248 0 10 chr17 73880839 73880941 -21391710 + GA-rich Low_complexity Low_complexity 2 102 0 5 1148 300 271 106 8 chr17 73881091 73881214 -21391437 + L1MB7 LINE L1 5580 5714 -460 5 1148 683 319 64 3 chr17 73881239 73881522 -21391129 + L1MB7 LINE L1 5788 6087 -97 5 1148 1169 174 9 44 chr17 73882311 73882540 -21390111 - URR1B DNA MER1_type 0 225 5 5 1148 213 39 0 0 chr17 73882983 73883009 -21389642 + (GGA)n Simple_repeat Simple_repeat 2 27 0 5 1148 402 69 0 0 chr17 73883064 73883122 -21389529 + (CTGGGG)n Simple_repeat Simple_repeat 2 59 0 5 1148 428 322 0 90 chr17 73883124 73883257 -21389394 + B4A SINE B4 13 133 -159 5 1148 627 142 0 0 chr17 73887502 73887608 -21385043 + (TG)n Simple_repeat Simple_repeat 1 106 0 5 1148 810 288 19 107 chr17 73887612 73887667 -21384984 - B4 SINE B4 0 292 247 5 1148 2032 152 42 17 chr17 73887667 73888023 -21384628 + ORR1B2 LTR MaLR 1 365 -2 5 1148 846 288 19 107 chr17 73888023 73888286 -21384365 - B4A SINE B4 -42 250 2 5 1148 1640 276 115 9 chr17 73888611 73889141 -21383510 - Lx8 LINE L1 -60 7413 6828 5 1148 391 289 60 65 chr17 73890980 73891180 -21381471 + MIRc SINE MIR 68 266 -2 5 1148 188 206 0 0 chr17 73891358 73891392 -21381259 + MIRm SINE MIR 218 251 -25 5 1148 718 297 6 0 chr17 73891460 73891642 -21381009 + MER5A DNA MER1_type 5 187 -2 5 1148 505 240 5 155 chr17 73891736 73891943 -21380708 + MTEa LTR MaLR 5 180 -199 5 1148 424 349 56 70 chr17 73891943 73892094 -21380557 + MLT2B2 LTR ERVL 5 356 -245 5 1148 189 147 0 0 chr17 73892123 73892157 -21380494 + (TCTA)n Simple_repeat Simple_repeat 4 37 0 5 1148 351 0 0 0 chr17 73892158 73892197 -21380454 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1148 464 262 9 0 chr17 73892217 73892324 -21380327 - RSINE1 SINE B4 -46 119 12 5 1148 254 241 203 10 chr17 73892553 73892677 -21379974 - MIR SINE MIR -102 166 14 5 1148 183 167 0 0 chr17 73893144 73893186 -21379465 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1148 831 179 131 11 chr17 73893618 73893793 -21378858 - MTD LTR MaLR 0 419 224 5 1148 213 392 0 48 chr17 73896243 73896369 -21376282 + L2c LINE L2 3049 3168 -219 5 1148 1409 159 0 13 chr17 73896722 73896951 -21375700 + URR1A DNA MER1_type 1 226 0 5 1148 650 207 0 6 chr17 73897847 73898022 -21374629 + (TG)n Simple_repeat Simple_repeat 1 174 0 5 1148 272 261 149 68 chr17 73899263 73899411 -21373240 + ORR1E LTR MaLR 96 255 -104 5 1148 545 328 37 12 chr17 73901241 73901442 -21371209 + MLT1F2 LTR MaLR 314 592 -35 5 1148 1033 144 144 5 chr17 73901442 73901637 -21371014 - URR1A DNA MER1_type -4 222 1 5 1148 258 342 45 78 chr17 73901637 73901679 -21370972 + MLT1F2 LTR MaLR 593 627 0 5 1148 662 0 13 0 chr17 73901694 73901772 -21370879 + (GGA)n Simple_repeat Simple_repeat 3 81 0 5 1148 216 158 0 0 chr17 73901773 73901811 -21370840 + (CAT)n Simple_repeat Simple_repeat 2 39 0 5 1148 203 274 0 19 chr17 73902019 73902071 -21370580 + CT-rich Low_complexity Low_complexity 3 53 0 5 1148 225 270 93 13 chr17 73903270 73903345 -21369306 - MIR SINE MIR -67 141 61 5 1148 976 140 18 18 chr17 73904325 73904492 -21368159 - URR1A DNA MER1_type 0 226 60 5 1148 1330 143 38 17 chr17 73905369 73905604 -21367047 + ORR1B1 LTR MaLR 155 394 0 5 1148 1154 102 6 0 chr17 73905604 73905771 -21366880 + ORR1B1-int LTR MaLR 1 168 -1795 5 1148 441 36 0 0 chr17 73906433 73906488 -21366163 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 1148 207 270 48 0 chr17 73906665 73906728 -21365923 - MIRb SINE MIR 0 268 203 5 1148 2172 156 35 0 chr17 73906911 73907258 -21365393 + MTC LTR MaLR 13 371 -50 5 1148 381 290 135 10 chr17 73908207 73908417 -21364234 + MIRb SINE MIR 31 267 -1 5 1148 197 293 88 29 chr17 73909383 73909485 -21363166 + MIRc SINE MIR 160 267 -1 5 1148 275 286 35 23 chr17 73910141 73910227 -21362424 - MIRc SINE MIR -89 179 93 5 1148 1389 209 131 108 chr17 73911175 73911657 -21360994 - MT2A LTR ERVL -40 493 1 5 1148 2346 137 70 18 chr17 73911929 73912329 -21360322 + MTC LTR MaLR 1 421 0 5 1148 258 224 0 29 chr17 73912904 73912973 -21359678 + (TCTCTG)n Simple_repeat Simple_repeat 5 71 0 5 1148 384 267 29 10 chr17 73913015 73913117 -21359534 + MIRc SINE MIR 35 138 -130 5 1148 10125 114 26 14 chr17 73913138 73915318 -21357333 - L1_Mus3 LINE L1 -2 6636 4429 5 1148 603 254 61 61 chr17 73916572 73916786 -21355865 - MTEa LTR MaLR 0 379 166 5 1148 1031 245 20 75 chr17 73916799 73917094 -21355557 + Lx6 LINE L1 7171 7449 -11 5 1148 468 295 45 8 chr17 73917114 73917247 -21355404 - ID_B1 SINE B4 0 224 87 5 1148 606 258 70 29 chr17 73917253 73917425 -21355226 - MTEa LTR MaLR -200 179 1 5 1148 650 75 11 0 chr17 73919496 73919589 -21353062 + (GA)n Simple_repeat Simple_repeat 2 95 0 5 1148 315 300 23 66 chr17 73920121 73920272 -21352379 - MER5A1 DNA MER1_type -29 137 1 5 1148 333 240 26 26 chr17 73920278 73920354 -21352297 + MER5A1 DNA MER1_type 2 77 -89 5 1148 527 232 140 42 chr17 73920354 73920547 -21352104 + B3 SINE B2 2 213 -3 5 1148 259 242 87 78 chr17 73920580 73920683 -21351968 + MER5A1 DNA MER1_type 62 165 -1 5 1148 182 229 0 0 chr17 73920700 73920735 -21351916 + MER5B DNA MER1_type 9 43 -135 5 1148 209 329 73 0 chr17 73920751 73920833 -21351818 - MER5B DNA MER1_type -89 89 2 5 1148 450 0 0 0 chr17 73921062 73921112 -21351539 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 1148 273 286 98 104 chr17 73921123 73921306 -21351345 - MIR SINE MIR -51 211 30 5 1148 563 271 70 113 chr17 73921443 73921672 -21350979 + MER20 DNA MER1_type 1 219 0 5 1149 432 0 0 0 chr17 73926013 73926061 -21346590 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1149 414 0 0 0 chr17 73926061 73926106 -21346545 + (GA)n Simple_repeat Simple_repeat 2 47 0 5 1149 201 74 0 0 chr17 73926425 73926452 -21346199 + (GAAA)n Simple_repeat Simple_repeat 1 27 0 5 1149 696 24 0 0 chr17 73926501 73926583 -21346068 + (GAAA)n Simple_repeat Simple_repeat 2 83 0 5 1149 939 190 133 83 chr17 73926585 73926827 -21345824 - RMER17C LTR ERVK -30 380 137 5 1149 824 28 0 9 chr17 73926827 73926935 -21345716 + (GAA)n Simple_repeat Simple_repeat 3 109 0 5 1149 939 190 133 83 chr17 73926935 73927054 -21345597 - RMER17C LTR ERVK -274 136 1 5 1149 231 299 39 13 chr17 73927085 73927163 -21345488 - MLT2B4 LTR ERVL -476 80 1 5 1149 880 216 95 0 chr17 73928449 73928639 -21344012 - B3 SINE B2 -7 209 2 5 1149 294 29 0 0 chr17 73928703 73928738 -21343913 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 5 1149 825 144 0 0 chr17 73928757 73928931 -21343720 + (TC)n Simple_repeat Simple_repeat 1 174 0 5 1149 865 251 92 32 chr17 73928983 73929234 -21343417 - MLT2D LTR ERVL -148 266 1 5 1149 214 278 106 67 chr17 73929286 73929390 -21343261 - MIR SINE MIR -68 200 86 5 1149 212 254 109 0 chr17 73930391 73930446 -21342205 - MIRc SINE MIR -88 180 120 5 1149 238 285 76 61 chr17 73931606 73931737 -21340914 - MLT2E LTR ERVL -479 149 17 5 1149 215 357 0 0 chr17 73934065 73934135 -21338516 - BC1_Mm scRNA scRNA -82 70 1 5 1149 228 35 0 0 chr17 73934212 73934241 -21338410 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 5 1149 445 228 62 47 chr17 73934241 73934370 -21338281 - B1F1 SINE Alu -13 136 6 5 1149 283 216 0 136 chr17 73934789 73934987 -21337664 + GA-rich Low_complexity Low_complexity 3 173 0 5 1149 1172 97 11 0 chr17 73936077 73936253 -21336398 + (TCCC)n Simple_repeat Simple_repeat 3 180 0 5 1149 919 46 23 15 chr17 73937397 73937529 -21335122 + (TTTTC)n Simple_repeat Simple_repeat 2 134 0 6 1149 456 19 0 0 chr17 73937535 73937588 -21335063 + (TC)n Simple_repeat Simple_repeat 2 54 0 6 1149 962 66 0 0 chr17 73937589 73937710 -21334941 - B1_Mus1 SINE Alu -27 121 1 6 1149 214 250 19 0 chr17 73937830 73937882 -21334769 - MIRb SINE MIR -7 261 209 6 1149 222 292 109 7 chr17 73937891 73938029 -21334622 + L2 LINE L2 2048 2199 -1220 6 1149 189 0 0 0 chr17 73938379 73938400 -21334251 + (CCCCCA)n Simple_repeat Simple_repeat 1 21 0 6 1149 1263 259 104 18 chr17 73938685 73939071 -21333580 - MTD LTR MaLR 0 419 1 6 1149 215 359 42 8 chr17 73939109 73939227 -21333424 + L2c LINE L2 3264 3385 -2 6 1149 363 324 103 86 chr17 73940620 73941677 -21330974 + HAL1b LINE L1 54 1128 -881 6 1149 497 294 76 51 chr17 73941782 73941978 -21330673 - ORR1E LTR MaLR 0 379 150 6 1149 351 0 0 0 chr17 73941978 73942017 -21330634 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1149 497 308 42 75 chr17 73942017 73942169 -21330482 - ORR1E LTR MaLR -210 149 1 6 1149 319 309 118 43 chr17 73942586 73942772 -21329879 + MIRb SINE MIR 51 250 -18 6 1149 712 144 17 11 chr17 73942852 73943027 -21329624 + (CA)n Simple_repeat Simple_repeat 1 176 0 6 1149 303 49 0 0 chr17 73943024 73943065 -21329586 + (CAGAGA)n Simple_repeat Simple_repeat 6 46 0 6 1149 251 298 125 37 chr17 73943065 73943201 -21329450 + MLT1M LTR MaLR 429 576 -96 6 1149 227 291 98 49 chr17 73943405 73943528 -21329123 + MIR3 SINE MIR 59 187 -21 6 1149 679 291 101 45 chr17 73943885 73944303 -21328348 + L1MC4a LINE L1 7207 7647 -235 6 1149 793 289 35 142 chr17 73944469 73944900 -21327751 - MLT1B LTR MaLR -2 388 4 6 1149 1278 254 95 32 chr17 73945547 73945893 -21326758 - MTEa LTR MaLR -11 368 1 6 1149 492 32 0 0 chr17 73945992 73946054 -21326597 + (CA)n Simple_repeat Simple_repeat 1 62 0 6 1149 186 71 0 0 chr17 73946054 73946082 -21326569 + (GA)n Simple_repeat Simple_repeat 1 28 0 6 1149 315 0 0 0 chr17 73947067 73947102 -21325549 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 6 1149 250 295 43 35 chr17 73947342 73947458 -21325193 - MIRb SINE MIR -123 145 29 6 1149 287 300 27 11 chr17 73947765 73947876 -21324775 - PB1D10 SINE Alu -36 113 1 6 1149 280 361 8 63 chr17 73947876 73947892 -21324759 - ID_B1 SINE B4 -33 191 72 6 1149 2619 122 23 0 chr17 73948104 73948488 -21324163 - ORR1B1 LTR MaLR 0 394 2 6 1149 189 219 24 0 chr17 73948519 73948560 -21324091 + MIR SINE MIR 51 92 -116 6 1149 561 326 11 32 chr17 73949836 73950023 -21322628 + MER58A DNA MER1_type 38 220 -4 6 1149 275 304 91 80 chr17 73950034 73950209 -21322442 + MIRb SINE MIR 24 200 -68 6 1149 682 267 0 20 chr17 73950667 73950816 -21321835 - B1_Mur1 SINE Alu -1 148 3 6 1149 689 281 123 127 chr17 73951848 73951884 -21320767 - MLT2C2 LTR ERVL -1 463 426 6 1149 312 27 0 0 chr17 73951884 73951921 -21320730 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 1149 689 281 123 127 chr17 73951921 73952349 -21320302 - MLT2C2 LTR ERVL -39 425 1 6 1149 252 260 51 13 chr17 73953089 73953167 -21319484 - Charlie9 DNA MER1_type -16 2741 2661 6 1149 221 246 0 0 chr17 73953234 73953291 -21319360 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 1149 1006 268 69 22 chr17 73953333 73953608 -21319043 + B4 SINE B4 5 292 0 6 1149 24 0 0 0 chr17 73953663 73953687 -21318964 + AT_rich Low_complexity Low_complexity 1 24 0 6 1149 1153 254 37 34 chr17 73954184 73954481 -21318170 + MTE2b LTR MaLR 82 379 0 6 1149 183 356 82 0 chr17 73955299 73955372 -21317279 + MIR3 SINE MIR 93 171 -37 6 1149 353 279 182 7 chr17 73955378 73955515 -21317136 + RSINE1 SINE B4 3 163 -2 6 1149 1389 61 0 0 chr17 73956173 73956531 -21316120 + (TG)n Simple_repeat Simple_repeat 1 358 0 6 1149 242 280 121 26 chr17 73956668 73956785 -21315866 + L2a LINE L2 3251 3401 -25 6 1149 1263 27 0 26 chr17 73957162 73957313 -21315338 + B1_Mm SINE Alu 1 147 0 6 1149 210 80 60 0 chr17 73957317 73957367 -21315284 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 6 1149 659 70 30 0 chr17 73957491 73957591 -21315060 + (CATATA)n Simple_repeat Simple_repeat 2 104 0 6 1149 421 355 119 26 chr17 73957770 73957996 -21314655 - LTR33B LTR ERVL -229 274 28 6 1149 399 41 0 0 chr17 73958190 73958239 -21314412 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1149 324 0 0 0 chr17 73958239 73958274 -21314377 + (GA)n Simple_repeat Simple_repeat 2 37 0 6 1149 1200 120 0 32 chr17 73959725 73959915 -21312736 - ORR1A2 LTR MaLR -143 184 1 6 1149 386 341 88 0 chr17 73960251 73960421 -21312230 - MIRc SINE MIR -38 230 46 6 1149 849 92 0 0 chr17 73960843 73960963 -21311688 + (TTTC)n Simple_repeat Simple_repeat 2 121 0 6 1149 959 287 94 92 chr17 73960966 73960992 -21311659 - L1M4c LINE L1 -2947 3435 3405 6 1149 1190 48 7 0 chr17 73960992 73961138 -21311513 - B1_Mm SINE Alu 0 147 1 6 1149 959 287 94 92 chr17 73961138 73961531 -21311120 - L1M4c LINE L1 -2978 3404 3070 6 1149 843 105 105 0 chr17 73961531 73961664 -21310987 - B1_Mus1 SINE Alu -1 147 1 6 1149 959 287 94 92 chr17 73961664 73962248 -21310403 - L1M4c LINE L1 -3313 3069 2429 6 1149 733 131 0 15 chr17 73962257 73962389 -21310262 + (TTCC)n Simple_repeat Simple_repeat 4 133 0 6 1149 234 0 0 0 chr17 73962385 73962411 -21310240 + (TCC)n Simple_repeat Simple_repeat 2 27 0 6 1149 325 309 104 35 chr17 73962433 73962809 -21309842 - L1M4c LINE L1 -3961 2423 2022 6 1149 961 315 90 39 chr17 73962803 73963637 -21309014 - L1M4c LINE L1 -4442 2892 1658 6 1149 349 288 52 29 chr17 73963721 73963857 -21308794 - L1M4c LINE L1 -5324 1580 1442 6 1149 338 299 155 16 chr17 73963924 73964053 -21308598 - RSINE1 SINE B4 -8 157 11 6 1149 428 91 15 0 chr17 73964158 73964224 -21308427 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 1149 539 332 89 73 chr17 73964294 73964417 -21308234 - L1M4c LINE L1 -5683 1221 1104 6 1149 800 194 7 7 chr17 73964417 73964562 -21308089 - B1_Mur1 SINE Alu 0 149 5 6 1149 539 332 89 73 chr17 73964562 73964889 -21307762 - L1M4c LINE L1 -5801 1103 764 6 1149 325 274 45 45 chr17 73965850 73965938 -21306713 + B3A SINE B2 95 182 -16 6 1149 338 280 0 0 chr17 73966099 73966192 -21306459 - L1M4c LINE L1 -6406 498 406 6 1149 524 29 0 14 chr17 73966194 73966265 -21306386 + (TTGG)n Simple_repeat Simple_repeat 2 71 0 6 1149 305 322 22 0 chr17 73966900 73966990 -21305661 - L2b LINE L2 -8 3367 3276 6 1149 301 357 64 60 chr17 73967306 73967556 -21305095 + L4 LINE RTE 1678 1928 -101 6 1149 473 297 60 7 chr17 73967669 73967818 -21304833 + MamGypLTR1a LTR Gypsy 628 784 0 6 1149 405 0 0 0 chr17 73967961 73968006 -21304645 + (TC)n Simple_repeat Simple_repeat 2 46 0 6 1149 477 0 0 0 chr17 73968006 73968058 -21304593 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1149 21 0 0 0 chr17 73969208 73969229 -21303422 + AT_rich Low_complexity Low_complexity 1 21 0 6 1149 289 335 75 79 chr17 73969514 73969832 -21302819 + L2a LINE L2 2494 2810 -609 6 1149 263 150 17 0 chr17 73969834 73969894 -21302757 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 1149 198 0 0 0 chr17 73970085 73970107 -21302544 + (TGG)n Simple_repeat Simple_repeat 1 22 0 6 1149 442 218 0 22 chr17 73970111 73970200 -21302451 - B4A SINE B4 -204 88 2 6 1149 365 321 118 55 chr17 73970200 73970717 -21301934 + L2a LINE L2 2793 3348 -78 6 1149 951 216 19 37 chr17 73970826 73971042 -21301609 + B3 SINE B2 5 216 0 6 1149 220 283 0 0 chr17 73971181 73971234 -21301417 - L2a LINE L2 0 3426 3374 6 1149 350 284 0 10 chr17 73972795 73972898 -21299753 - MIR SINE MIR -37 225 124 6 1149 1160 75 0 0 chr17 73973102 73973249 -21299402 - B1_Mus2 SINE Alu 0 147 1 6 1149 423 0 0 0 chr17 73973275 73973322 -21299329 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1149 225 344 47 52 chr17 73973322 73973494 -21299157 - Lx8 LINE L1 -60 7413 7243 6 1149 536 273 33 0 chr17 73973569 73973719 -21298932 - Lx8 LINE L1 -360 7113 6959 6 1149 227 338 14 0 chr17 73974860 73974931 -21297720 + MER5A DNA MER1_type 68 139 -50 6 1149 239 282 13 173 chr17 73975113 73975263 -21297388 + ORR1A3-int LTR MaLR 1488 1613 -350 6 1149 1035 25 0 0 chr17 73975393 73975515 -21297136 + (TATATG)n Simple_repeat Simple_repeat 2 123 0 6 1149 556 301 66 24 chr17 73975699 73975910 -21296741 + B4A SINE B4 7 226 -66 6 1149 1013 156 128 20 chr17 73976843 73977046 -21295605 + URR1B DNA MER1_type 1 225 0 6 1149 336 332 107 41 chr17 73978152 73978422 -21294229 + L1MD3 LINE L1 7593 7970 -25 6 1149 907 180 59 12 chr17 73978502 73978671 -21293980 - URR1A DNA MER1_type -2 224 48 6 1149 422 279 88 41 chr17 73978671 73978696 -21293955 + CYRA11_Mm Unknown Y-chromosome 173 375 -242 6 1149 1012 290 92 31 chr17 73979042 73979433 -21293218 + MLT2C2 LTR ERVL 1 415 -49 6 1149 315 184 15 39 chr17 73979436 73979566 -21293085 + CT-rich Low_complexity Low_complexity 3 129 0 6 1149 680 103 9 0 chr17 73980050 73980157 -21292494 + (TC)n Simple_repeat Simple_repeat 2 109 0 6 1149 598 169 131 12 chr17 73980618 73980786 -21291865 + MER53 DNA hAT 5 192 -1 6 1149 2207 112 3 0 chr17 73980962 73981276 -21291375 - ORR1A2 LTR MaLR -7 320 6 6 1149 1102 214 224 62 chr17 73981278 73981636 -21291015 + MTD LTR MaLR 4 419 0 6 1149 1164 256 37 42 chr17 73981785 73982164 -21290487 + MTEb LTR MaLR 3 379 0 6 1149 260 329 90 51 chr17 73983245 73983479 -21289172 + L2a LINE L2 3091 3333 -93 6 1149 257 356 0 0 chr17 73983618 73983705 -21288946 + Charlie19a DNA Charlie 101 187 -199 6 1149 1505 256 182 35 chr17 73985121 73985266 -21287385 + Lx8 LINE L1 6780 6953 -520 6 1149 201 39 0 0 chr17 73985266 73985292 -21287359 + (CCA)n Simple_repeat Simple_repeat 2 27 0 6 1149 192 40 0 0 chr17 73985301 73985326 -21287325 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 1149 1505 256 182 35 chr17 73985326 73985620 -21287031 + Lx8 LINE L1 6964 7324 -149 6 1149 2009 171 62 22 chr17 73985620 73986020 -21286631 - MTD LTR MaLR 0 419 4 6 1149 1505 256 182 35 chr17 73986020 73986169 -21286482 + Lx8 LINE L1 7325 7465 -8 6 1149 291 320 28 28 chr17 73986201 73986307 -21286344 - Charlie4a DNA MER1_type -186 322 217 6 1149 265 308 37 18 chr17 73986795 73986904 -21285747 + LTR33A_ LTR ERVL 53 163 -368 6 1149 206 357 68 25 chr17 73987221 73987382 -21285269 - MIRb SINE MIR -34 234 67 7 1149 916 285 18 43 chr17 73987620 73987899 -21284752 + B4A SINE B4 1 272 -20 7 1149 183 80 0 0 chr17 73987900 73987925 -21284726 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 1149 1093 278 64 17 chr17 73988134 73988478 -21284173 + MLT1A0 LTR MaLR 1 360 -5 7 1149 304 317 135 22 chr17 73988536 73988742 -21283909 - MIRc SINE MIR -20 248 31 7 1149 3310 218 86 111 chr17 73990485 73991775 -21280876 + RMER1A Other Other 33 980 -50 7 1149 241 68 45 0 chr17 73992758 73992802 -21279849 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 7 1149 473 279 49 166 chr17 73993353 73993675 -21278976 + B4A SINE B4 7 290 -2 7 1149 465 224 93 0 chr17 73994079 73994186 -21278465 + PB1D9 SINE Alu 3 119 -1 7 1149 1200 111 0 0 chr17 73994190 73994370 -21278281 + (GA)n Simple_repeat Simple_repeat 1 180 0 7 1149 200 35 35 0 chr17 73994551 73994580 -21278071 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 1149 435 19 0 0 chr17 73995903 73995955 -21276696 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 1149 351 318 141 40 chr17 73997183 73997609 -21275042 + L1MB8 LINE L1 5709 6177 -1 7 1149 422 276 0 0 chr17 73997830 73997935 -21274716 - MIR SINE MIR -43 219 115 7 1149 373 313 52 0 chr17 73999769 73999884 -21272767 - MER45A DNA Tip100 0 178 58 7 1149 589 185 6 22 chr17 74000251 74000433 -21272218 + (CATA)n Simple_repeat Simple_repeat 1 179 0 1 1149 1120 67 0 0 chr17 74000602 74000736 -21271915 + B1_Mus2 SINE Alu 5 138 -9 2 1149 847 27 9 9 chr17 74000736 74000847 -21271804 + (GAAA)n Simple_repeat Simple_repeat 2 112 0 3 1149 630 0 0 0 chr17 74000848 74000918 -21271733 + (GGAAA)n Simple_repeat Simple_repeat 1 70 0 4 1149 187 237 0 0 chr17 74001426 74001464 -21271187 + MIR SINE MIR 63 100 -108 5 1149 427 285 105 42 chr17 74002436 74002672 -21269979 - B4 SINE B4 -18 274 40 6 1149 4246 60 0 9 chr17 74002690 74003227 -21269424 - L1Md_F2 LINE L1 -1 6581 6050 7 1149 1523 48 0 0 chr17 74003228 74003416 -21269235 + L1_Mm LINE L1 3863 4050 -1833 8 1149 207 236 111 35 chr17 74003454 74003540 -21269111 + MIRc SINE MIR 61 156 -120 9 1149 223 250 29 14 chr17 74004076 74004145 -21268506 + ID4_ SINE ID 9 78 -5 1 1149 261 0 0 0 chr17 74004243 74004272 -21268379 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1149 469 306 20 66 chr17 74004321 74004517 -21268134 + RMER30 DNA MER1_type 7 193 -9 1 1149 261 290 32 11 chr17 74004830 74004924 -21267727 - MER34A LTR ERV1 -10 561 466 1 1149 425 335 31 25 chr17 74005078 74005237 -21267414 - RSINE1 SINE B4 -3 162 3 1 1149 199 278 58 42 chr17 74006358 74006478 -21266173 - MIRb SINE MIR -67 201 80 1 1149 424 256 63 17 chr17 74006737 74006912 -21265739 - MamRep1161 DNA TcMar -496 461 279 1 1149 1005 139 155 0 chr17 74009398 74009585 -21263066 - URR1A DNA MER1_type -10 216 1 1 1149 404 279 14 29 chr17 74011427 74011567 -21261084 - HAL1-2a_MD LINE L1 -542 2482 2345 1 1149 414 0 0 0 chr17 74012915 74012961 -21259690 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1149 625 237 24 55 chr17 74014136 74014301 -21258350 + ORR1E LTR MaLR 1 160 -199 2 1149 884 309 75 50 chr17 74014433 74014832 -21257819 + Tigger7 DNA MER2_type 63 471 -2020 2 1149 292 190 25 0 chr17 74014831 74014910 -21257741 + Tigger7 DNA MER2_type 2330 2410 -81 2 1149 289 279 12 25 chr17 74014976 74015057 -21257594 + ID4 SINE ID 1 80 -3 2 1149 243 270 57 48 chr17 74015057 74015081 -21257570 + ID_B1 SINE B4 1 106 -118 2 1149 216 310 46 39 chr17 74015324 74015507 -21257144 - L2b LINE L2 -221 3205 3018 2 1149 408 261 0 17 chr17 74016008 74016125 -21256526 - B1F SINE Alu -1 148 34 2 1149 238 281 0 0 chr17 74016154 74016211 -21256440 + MLT1A0 LTR MaLR 46 102 -306 2 1149 183 146 0 0 chr17 74016215 74016256 -21256395 + (T)n Simple_repeat Simple_repeat 1 41 0 2 1149 1171 81 0 0 chr17 74016256 74016404 -21256247 - B1_Mus1 SINE Alu 0 148 1 2 1149 540 340 44 36 chr17 74016405 74016655 -21255996 + MLT1A0 LTR MaLR 112 363 -2 2 1149 230 189 19 0 chr17 74018760 74018813 -21253838 + A-rich Low_complexity Low_complexity 2 55 0 2 1149 1133 251 39 30 chr17 74019346 74019683 -21252968 + MER58B DNA MER1_type 2 341 0 3 1149 452 216 54 39 chr17 74019844 74019974 -21252677 - MLT1A0 LTR MaLR -142 223 92 3 1149 333 68 0 0 chr17 74020172 74020216 -21252435 + (CAAT)n Simple_repeat Simple_repeat 1 44 0 3 1149 610 295 110 57 chr17 74022737 74023190 -21249461 - MLT1D LTR MaLR 0 505 29 3 1149 283 338 48 48 chr17 74023386 74023551 -21249100 - MIRc SINE MIR -33 235 71 3 1149 418 262 58 0 chr17 74024055 74024158 -21248493 + PB1D10 SINE Alu 1 109 -8 3 1149 380 219 143 106 chr17 74025766 74025955 -21246696 - RLTR42-int LTR ERVK -4180 1342 1147 3 1149 2063 147 75 10 chr17 74026244 74026628 -21246023 - MTC LTR MaLR -10 411 3 3 1149 36 0 0 0 chr17 74027202 74027238 -21245413 + AT_rich Low_complexity Low_complexity 1 36 0 3 1149 492 307 7 35 chr17 74027304 74027449 -21245202 - B1_Mur1 SINE Alu -8 141 1 3 1149 310 383 0 18 chr17 74028000 74028109 -21244542 + PB1D9 SINE Alu 1 107 -13 4 1149 268 284 27 0 chr17 74028107 74028181 -21244470 + ID4 SINE ID 5 80 -3 4 1149 359 262 37 75 chr17 74028394 74028407 -21244244 - ID_B1 SINE B4 0 224 171 4 1149 671 164 15 0 chr17 74028407 74028534 -21244117 - B1_Mus2 SINE Alu -6 142 2 4 1149 359 262 37 75 chr17 74028534 74028555 -21244096 - ID_B1 SINE B4 0 170 70 4 1149 390 222 83 0 chr17 74028613 74028721 -21243930 + PB1D10 SINE Alu 1 117 0 4 1149 438 20 0 0 chr17 74028739 74028790 -21243861 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1149 252 0 0 0 chr17 74029072 74029100 -21243551 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 1149 416 327 68 4 chr17 74029501 74029753 -21242898 - L1M5 LINE L1 -3323 2823 2556 4 1149 319 264 108 13 chr17 74030123 74030280 -21242371 - L1M7 LINE L1 -4015 2203 2032 4 1149 661 307 104 48 chr17 74030592 74031129 -21241522 - L1M7 LINE L1 -4295 1923 1357 4 1149 585 0 0 0 chr17 74031260 74031325 -21241326 + (GA)n Simple_repeat Simple_repeat 2 66 0 4 1149 314 294 138 108 chr17 74031573 74032159 -21240492 - L1MC4 LINE L1 -748 7294 6691 5 1149 377 339 94 34 chr17 74032439 74032885 -21239766 - L1M7 LINE L1 -4973 1245 773 4 1149 228 273 78 22 chr17 74033291 74033381 -21239270 - L1M7 LINE L1 -5750 468 374 4 1149 450 0 0 0 chr17 74033997 74034047 -21238604 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1149 240 200 0 0 chr17 74034779 74034854 -21237797 + A-rich Low_complexity Low_complexity 1 75 0 5 1149 297 75 0 0 chr17 74036274 74036314 -21236337 + (A)n Simple_repeat Simple_repeat 1 40 0 5 1149 462 61 0 0 chr17 74036934 74037000 -21235651 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 1149 424 305 92 53 chr17 74038050 74038331 -21234320 - B4 SINE B4 0 292 1 5 1149 475 230 20 0 chr17 74039536 74039636 -21233015 + PB1D9 SINE Alu 6 107 -13 5 1149 504 137 0 0 chr17 74039640 74039742 -21232909 + (GA)n Simple_repeat Simple_repeat 1 102 0 5 1149 3492 25 2 0 chr17 74041765 74042160 -21230491 + MTA_Mm LTR MaLR 1 396 0 5 1149 226 345 109 0 chr17 74042240 74042359 -21230292 - MLT1J2 LTR MaLR -302 146 15 5 1149 1229 206 55 12 chr17 74042838 74043167 -21229484 + RMER17B LTR ERVK 616 958 0 6 1149 301 306 29 7 chr17 74043249 74043387 -21229264 - MER5A1 DNA MER1_type -23 143 3 6 1149 323 267 91 8 chr17 74043453 74043574 -21229077 - Cheshire DNA MER1_type -2151 269 139 6 1149 369 202 165 0 chr17 74046458 74046537 -21226114 - B1F1 SINE Alu -50 99 8 6 1149 259 328 79 39 chr17 74047302 74047480 -21225171 - L1ME3A LINE L1 -76 6097 5913 6 1149 460 343 50 17 chr17 74047481 74047721 -21224930 + MER58B DNA MER1_type 18 265 -76 6 1149 313 247 2 14 chr17 74047776 74047860 -21224791 - L1ME3A LINE L1 -606 5634 5551 6 1149 300 301 48 71 chr17 74049077 74049245 -21223406 + MIRc SINE MIR 94 257 -11 6 1149 246 192 0 0 chr17 74050155 74050207 -21222444 + A-rich Low_complexity Low_complexity 3 54 0 6 1149 471 35 0 0 chr17 74050721 74050778 -21221873 + (GA)n Simple_repeat Simple_repeat 2 58 0 6 1149 651 238 158 4 chr17 74050910 74051142 -21221509 + B4A SINE B4 25 292 0 6 1149 813 163 0 0 chr17 74051146 74051324 -21221327 + (CA)n Simple_repeat Simple_repeat 1 178 0 7 1149 1089 144 0 0 chr17 74051336 74051622 -21221029 + (CA)n Simple_repeat Simple_repeat 1 286 0 7 1149 279 236 28 0 chr17 74053773 74053845 -21218806 - B4 SINE B4 -5 287 214 7 1149 338 42 21 0 chr17 74053878 74053926 -21218725 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 1149 339 25 0 0 chr17 74053926 74053965 -21218686 + (GA)n Simple_repeat Simple_repeat 1 40 0 7 1149 624 308 9 85 chr17 74053992 74054308 -21218343 - B4A SINE B4 0 292 1 7 1149 243 255 0 0 chr17 74054309 74054356 -21218295 - B4 SINE B4 -66 226 180 7 1149 1333 111 0 5 chr17 74054968 74055158 -21217493 + B2_Mm2 SINE B2 1 189 -6 7 143 1205 140 47 77 chr17 74055492 74055725 -21216926 + URR1A DNA MER1_type 1 226 0 7 1150 240 35 0 0 chr17 74055932 74055961 -21216690 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 1150 295 346 22 22 chr17 74056027 74056163 -21216488 + MER5A DNA MER1_type 54 189 0 7 1150 2346 142 35 38 chr17 74056269 74056397 -21216254 + MTC LTR MaLR 17 137 -284 7 1150 1902 146 80 0 chr17 74056397 74056699 -21215952 + ORR1A3 LTR MaLR 1 326 0 8 1150 2346 142 35 38 chr17 74056699 74056966 -21215685 + MTC LTR MaLR 138 411 -10 7 1150 405 0 0 0 chr17 74056969 74057014 -21215637 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 1150 22 0 0 0 chr17 74057035 74057057 -21215594 + AT_rich Low_complexity Low_complexity 1 22 0 8 1150 227 288 30 0 chr17 74058206 74058272 -21214379 + MIR SINE MIR 87 154 -108 8 1150 1142 271 38 28 chr17 74061979 74062268 -21210383 + B4 SINE B4 1 292 0 8 1150 534 70 0 0 chr17 74065107 74065178 -21207473 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 8 1150 235 176 0 38 chr17 74065645 74065698 -21206953 - MER63D DNA AcHobo -648 413 363 8 1150 378 115 0 0 chr17 74065728 74065789 -21206862 + (CA)n Simple_repeat Simple_repeat 2 62 0 8 1150 226 347 0 13 chr17 74067130 74067206 -21205445 - AmnSINE1 SINE SINE -84 491 417 8 1150 408 20 0 0 chr17 74067206 74067255 -21205396 + (TG)n Simple_repeat Simple_repeat 1 49 0 8 1150 451 237 0 113 chr17 74067899 74067925 -21204726 + MT2B LTR ERVL 147 157 -444 9 1150 715 246 28 0 chr17 74067925 74068067 -21204584 + B1_Mur3 SINE Alu 4 149 0 9 1150 2014 173 43 33 chr17 74068228 74068245 -21204406 - MTB_Mm LTR MaLR -8 399 383 9 1150 231 36 0 0 chr17 74068245 74068273 -21204378 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 9 1150 2014 173 43 33 chr17 74068273 74068650 -21204001 - MTB_Mm LTR MaLR -25 382 1 9 1150 263 341 80 68 chr17 74068943 74069119 -21203532 - ORR1D1 LTR MaLR -191 183 6 9 1150 1811 150 138 6 chr17 74069122 74069470 -21203181 + ORR1B1 LTR MaLR 1 394 0 9 1150 271 185 0 36 chr17 74069491 74069547 -21203104 + RMER30 DNA MER1_type 7 60 -142 9 1150 682 74 298 0 chr17 74070461 74070582 -21202069 - URR1B DNA MER1_type -3 222 66 9 1150 24 0 0 0 chr17 74070935 74070959 -21201692 + AT_rich Low_complexity Low_complexity 1 24 0 9 1150 2411 137 3 21 chr17 74071268 74071640 -21201011 - MTC LTR MaLR -56 365 1 9 1150 345 209 36 26 chr17 74071756 74071952 -21200699 + CT-rich Low_complexity Low_complexity 1 198 0 1 1150 661 230 64 20 chr17 74072139 74072343 -21200308 + RMER13B LTR ERVK 693 905 -3 1 1150 3514 150 33 48 chr17 74072428 74073094 -21199557 - RMER13B LTR ERVK -252 656 1 1 1150 492 18 0 0 chr17 74074836 74074893 -21197758 + (GA)n Simple_repeat Simple_repeat 2 58 0 1 1150 199 398 18 18 chr17 74076470 74076580 -21196071 - L2b LINE L2 -2 3424 3315 1 1150 874 135 7 14 chr17 74077455 74077598 -21195053 + URR1A DNA MER1_type 85 226 0 1 1150 812 118 24 0 chr17 74078323 74078450 -21194201 - RLTR15 LTR ERVK -6 353 224 1 1150 402 247 0 0 chr17 74078450 74078612 -21194039 + (TG)n Simple_repeat Simple_repeat 2 163 0 1 1150 677 311 60 32 chr17 74078642 74078924 -21193727 - B4 SINE B4 -2 290 1 1 1150 1022 307 103 15 chr17 74079577 74079974 -21192677 - MLT1D LTR MaLR 0 505 74 1 1150 184 307 80 0 chr17 74080073 74080148 -21192503 - MIR SINE MIR -89 173 93 1 1150 23 0 0 0 chr17 74080260 74080283 -21192368 + AT_rich Low_complexity Low_complexity 1 23 0 1 1150 232 313 112 67 chr17 74080358 74080536 -21192115 - L2b LINE L2 -208 3167 2982 1 1150 1724 136 94 17 chr17 74080728 74081025 -21191626 + ORR1B2 LTR MaLR 3 322 -45 1 1150 1045 234 32 47 chr17 74081025 74081366 -21191285 + RLTR15 LTR ERVK 1 336 -23 1 1150 367 130 0 5 chr17 74081385 74081441 -21191210 + ORR1B2 LTR MaLR 319 419 0 1 1150 1804 146 74 30 chr17 74081441 74081775 -21190876 - ORR1C2 LTR MaLR -35 349 1 1 1150 220 325 39 0 chr17 74081789 74081866 -21190785 + L2a LINE L2 3347 3426 0 1 1150 22 0 0 0 chr17 74082309 74082331 -21190320 + AT_rich Low_complexity Low_complexity 1 22 0 1 1150 180 298 0 0 chr17 74082461 74082508 -21190143 + MIRc SINE MIR 121 167 -101 1 1150 876 307 98 0 chr17 74082696 74083002 -21189649 - MER2 DNA MER2_type -2 343 8 1 1150 490 302 8 8 chr17 74084236 74084363 -21188288 + ORR1E LTR MaLR 3 129 -230 1 1150 238 269 0 43 chr17 74084493 74084563 -21188088 + ORR1E LTR MaLR 290 356 -23 1 1150 3549 28 0 0 chr17 74084608 74085004 -21187647 + MTA_Mm LTR MaLR 1 396 0 1 1150 1389 268 54 26 chr17 74086121 74086511 -21186140 - MTD LTR MaLR -17 402 2 1 1150 1096 165 35 35 chr17 74086785 74087011 -21185640 - URR1A DNA MER1_type 0 226 1 1 1150 351 0 0 0 chr17 74087129 74087168 -21185483 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 1150 369 0 0 0 chr17 74087168 74087208 -21185443 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1150 630 286 46 65 chr17 74087212 74087404 -21185247 - B4A SINE B4 -62 230 39 1 1150 1977 110 86 0 chr17 74087404 74087705 -21184946 - ORR1A2 LTR MaLR 0 327 1 1 1150 630 286 46 65 chr17 74087705 74087729 -21184922 - B4A SINE B4 -254 38 18 1 1150 256 325 158 25 chr17 74087912 74088070 -21184581 + LTR79 LTR ERVL 330 508 -19 1 1150 1083 304 31 15 chr17 74088155 74088482 -21184169 + Charlie1a DNA MER1_type 44 375 -1080 1 1150 539 302 43 32 chr17 74088558 74088743 -21183908 + LTR41 LTR ERVL 443 629 -139 1 1150 228 154 0 0 chr17 74088817 74088869 -21183782 + CT-rich Low_complexity Low_complexity 1 52 0 1 1150 1031 150 6 6 chr17 74088969 74089137 -21183514 - URR1A DNA MER1_type -1 225 58 1 1150 299 178 84 0 chr17 74090685 74090792 -21181859 + (TA)n Simple_repeat Simple_repeat 2 117 0 1 1150 258 311 159 70 chr17 74091239 74091453 -21181198 - MIRc SINE MIR -29 239 7 1 1150 552 15 0 0 chr17 74091587 74091652 -21180999 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 1150 210 104 20 59 chr17 74092129 74092180 -21180471 + (CTG)n Simple_repeat Simple_repeat 1 49 0 1 1150 515 138 18 0 chr17 74092780 74092889 -21179762 + (TCTCTG)n Simple_repeat Simple_repeat 3 113 0 1 1150 29 28 0 0 chr17 74093088 74093124 -21179527 + AT_rich Low_complexity Low_complexity 1 36 0 1 1150 258 330 28 55 chr17 74093572 74093681 -21178970 - MIRb SINE MIR -68 200 95 1 1150 186 387 0 0 chr17 74094655 74094730 -21177921 - MIRb SINE MIR -73 195 121 1 1150 751 120 143 8 chr17 74095735 74095861 -21176790 + B1_Mus1 SINE Alu 1 143 -5 1 1150 900 265 36 0 chr17 74095892 74096088 -21176563 + B3 SINE B2 8 210 -6 1 1150 349 293 36 54 chr17 74096189 74096355 -21176296 - RNLTR23 LTR ERVK 0 642 480 1 1150 982 161 177 0 chr17 74096668 74096860 -21175791 - URR1A DNA MER1_type 0 226 1 1 1150 261 0 0 0 chr17 74096869 74096898 -21175753 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1150 747 0 0 0 chr17 74097927 74098010 -21174641 + (GGAGA)n Simple_repeat Simple_repeat 2 84 0 1 1150 193 29 0 56 chr17 74098012 74098048 -21174603 + (GGAGAA)n Simple_repeat Simple_repeat 3 36 0 1 1150 331 291 0 0 chr17 74099150 74099236 -21173415 - MIR3 SINE MIR -3 205 120 1 1150 729 201 0 0 chr17 74099270 74099404 -21173247 + B1_Mus1 SINE Alu 2 135 -13 1 1150 351 113 0 0 chr17 74099404 74099457 -21173194 + (TGAA)n Simple_repeat Simple_repeat 1 53 0 1 1150 2244 157 60 15 chr17 74099840 74100242 -21172409 - MTC LTR MaLR -1 420 1 1 1150 194 296 0 0 chr17 74100440 74100484 -21172167 - MIRm SINE MIR -6 270 227 1 1150 291 311 24 39 chr17 74100915 74101042 -21171609 + MLT1H LTR MaLR 142 266 -283 1 1150 1159 68 0 14 chr17 74101330 74101478 -21171173 + B1_Mus2 SINE Alu 2 147 0 1 1150 1296 161 13 5 chr17 74101593 74101817 -21170834 - URR1A DNA MER1_type 0 226 1 1 1150 3343 82 100 71 chr17 74102023 74102574 -21170077 + RMER2 LTR ERV1 1 567 0 1 1150 235 255 0 0 chr17 74102975 74103022 -21169629 + MIRm SINE MIR 103 149 -127 1 1150 509 224 55 76 chr17 74104211 74104349 -21168302 + B1_Mur1 SINE Alu 1 136 -13 1 1150 288 0 0 0 chr17 74104349 74104381 -21168270 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1 1150 1200 132 101 14 chr17 74104545 74104752 -21167899 - URR1B DNA MER1_type 0 225 1 1 1150 264 378 20 0 chr17 74105333 74105431 -21167220 - MIR SINE MIR -127 135 36 1 1150 422 348 89 43 chr17 74106750 74107119 -21165532 - L3 LINE CR1 -572 3917 3532 1 1150 679 306 39 23 chr17 74107208 74107466 -21165185 + B4A SINE B4 2 263 -29 1 1150 1384 257 23 61 chr17 74108162 74108486 -21164165 + MTE2b LTR MaLR 1 331 -48 1 1150 207 0 0 0 chr17 74108486 74108509 -21164142 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1150 1384 257 23 61 chr17 74108509 74108578 -21164073 + MTE2b LTR MaLR 332 379 0 1 1150 309 304 58 85 chr17 74109508 74109767 -21162884 + L1MEc LINE L1 160 411 -5989 1 1150 839 132 14 20 chr17 74110088 74110235 -21162416 - URR1A DNA MER1_type 0 226 81 1 1150 242 306 71 54 chr17 74110328 74110625 -21162026 + L1MEc LINE L1 802 1103 -5297 1 1150 21 0 0 0 chr17 74111009 74111030 -21161621 + AT_rich Low_complexity Low_complexity 1 21 0 1 1150 3092 14 3 3 chr17 74111031 74111377 -21161274 + ORR1A0 LTR MaLR 1 346 0 1 1150 1056 234 9 0 chr17 74111392 74111606 -21161045 + B3 SINE B2 1 216 0 1 1150 303 276 76 15 chr17 74111950 74112080 -21160571 + MIRb SINE MIR 70 207 -61 1 1150 268 320 33 39 chr17 74112541 74112694 -21159957 + MLT1D LTR MaLR 43 194 -311 1 1150 880 180 0 0 chr17 74113209 74113348 -21159303 + B1_Mus1 SINE Alu 3 141 -7 1 1150 212 164 31 47 chr17 74113348 74113412 -21159239 + (TTAG)n Simple_repeat Simple_repeat 2 64 0 1 1150 1020 292 59 79 chr17 74114364 74114713 -21157938 + MER21B LTR ERV1 6 353 -510 1 1150 1176 152 71 0 chr17 74114713 74114923 -21157728 + URR1B DNA MER1_type 1 225 0 1 1150 1020 292 59 79 chr17 74114923 74114964 -21157687 + MER21B LTR ERV1 354 388 -475 1 1150 2915 9 0 0 chr17 74115110 74115432 -21157219 + RLTRETN_Mm LTR ERVK 1 322 0 1 1150 226 211 0 0 chr17 74115514 74115552 -21157099 - MTEa LTR MaLR -288 91 54 1 1150 612 261 126 34 chr17 74115562 74115800 -21156851 + MER21B LTR ERV1 499 758 -105 1 1150 545 214 99 7 chr17 74116258 74116399 -21156252 + RMER1B Other Other 47 200 -866 1 1150 2344 139 67 15 chr17 74116400 74116801 -21155850 + RMER1B Other Other 642 1063 -3 1 1150 2448 221 72 18 chr17 74117320 74117872 -21154779 + Lx6 LINE L1 6864 7445 -15 1 1150 634 259 0 20 chr17 74120001 74120147 -21152504 + B1_Mur1 SINE Alu 5 147 -2 1 1150 325 209 56 127 chr17 74120800 74120926 -21151725 + MER63B DNA AcHobo 318 434 -2 1 1150 485 223 0 8 chr17 74121153 74121284 -21151367 + (TA)n Simple_repeat Simple_repeat 2 131 0 1 1150 821 261 83 0 chr17 74122017 74122270 -21150381 + B4A SINE B4 1 274 -18 1 1150 343 312 121 0 chr17 74122369 74122609 -21150042 + L1M5 LINE L1 4124 4392 -1754 1 1150 284 228 35 122 chr17 74123042 74123157 -21149494 + MT2B LTR ERVL 152 256 -345 1 1150 584 189 105 16 chr17 74123066 74123190 -21149461 + B1_Mur2 SINE Alu 15 149 0 1 1150 525 117 0 88 chr17 74123218 74123331 -21149320 - MTD LTR MaLR -39 380 278 1 1150 676 235 58 16 chr17 74124186 74124376 -21148275 - MTD LTR MaLR -14 405 208 1 1150 4368 139 11 19 chr17 74124419 74125136 -21147515 - Lx2B LINE L1 -2 6998 6288 1 1150 6672 141 7 29 chr17 74125136 74126698 -21145953 + Lx2 LINE L1 4748 6281 -716 1 1150 638 255 32 56 chr17 74126698 74126914 -21145737 - MTD LTR MaLR -208 211 1 1 1150 298 326 87 13 chr17 74126983 74127132 -21145519 + MER58A DNA MER1_type 12 171 -53 1 1150 532 316 138 0 chr17 74127230 74127455 -21145196 - RCHARR1 DNA MER1_type -92 882 627 1 1150 1331 89 10 55 chr17 74127478 74127680 -21144971 - B2_Mm2 SINE B2 0 195 3 1 1150 378 0 0 0 chr17 74127702 74127744 -21144907 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1150 333 0 0 0 chr17 74127744 74127780 -21144871 + (GA)n Simple_repeat Simple_repeat 1 37 0 1 1150 543 262 32 76 chr17 74127780 74127937 -21144714 - B3A SINE B2 -48 150 1 1 1150 1846 267 79 16 chr17 74127938 74128519 -21144132 - RCHARR1 DNA MER1_type -336 638 21 1 1150 217 308 82 55 chr17 74129032 74129142 -21143509 + L2b LINE L2 3263 3375 0 1 1150 311 65 22 0 chr17 74129186 74129232 -21143419 + (GGGA)n Simple_repeat Simple_repeat 3 49 0 1 1150 1364 165 9 4 chr17 74129538 74129763 -21142888 - URR1A DNA MER1_type 0 226 1 1 1150 7785 71 1 2 chr17 74130364 74131438 -21141213 + L1_Mus1 LINE L1 5494 6566 -1 2 1150 584 252 147 47 chr17 74132148 74132535 -21140116 + L1ME3A LINE L1 5566 5991 -182 2 1150 259 262 61 74 chr17 74133521 74133700 -21138951 - MIR SINE MIR -22 186 18 2 1150 2248 181 47 7 chr17 74134054 74134459 -21138192 - MTC LTR MaLR 0 421 1 2 1150 708 80 0 59 chr17 74134644 74134763 -21137888 - BC1_Mm scRNA scRNA -40 112 1 2 1150 688 240 101 10 chr17 74134770 74134968 -21137683 - B3 SINE B2 0 216 1 2 1150 232 356 73 17 chr17 74135310 74135487 -21137164 - MIR SINE MIR -2 260 74 2 1150 243 265 0 14 chr17 74136552 74136621 -21136030 + GA-rich Low_complexity Low_complexity 2 69 0 2 1150 997 312 55 40 chr17 74136652 74137146 -21135505 + RMER5 LTR ERV1 19 519 -15 2 1150 260 296 30 10 chr17 74137164 74137263 -21135388 + GA-rich Low_complexity Low_complexity 6 106 0 2 1150 731 189 30 6 chr17 74137451 74137616 -21135035 - URR1A DNA MER1_type -14 212 44 2 1150 207 211 0 0 chr17 74138313 74138351 -21134300 + (TTG)n Simple_repeat Simple_repeat 2 39 0 2 1150 223 72 23 23 chr17 74139513 74139556 -21133095 + (TCC)n Simple_repeat Simple_repeat 1 43 0 2 1150 734 172 15 0 chr17 74140607 74140741 -21131910 - B1_Mus2 SINE Alu -1 146 11 2 1150 494 267 111 40 chr17 74141052 74141349 -21131302 + MLT1A0 LTR MaLR 10 327 -38 2 1150 257 0 30 0 chr17 74141459 74141492 -21131159 + (TTA)n Simple_repeat Simple_repeat 1 34 0 2 1150 11213 90 5 2 chr17 74141492 74143848 -21128803 - L1_Mus3 LINE L1 -16 6622 4261 2 1150 4362 48 0 2 chr17 74143871 74144393 -21128258 - L1_Mus1 LINE L1 0 6567 6047 2 1150 404 314 44 66 chr17 74145103 74145468 -21127183 + ORR1E LTR MaLR 3 359 0 2 1150 517 170 179 0 chr17 74146630 74146742 -21125909 + B1_Mur1 SINE Alu 13 144 -5 2 1150 365 95 0 16 chr17 74146744 74146808 -21125843 + (GGA)n Simple_repeat Simple_repeat 2 64 0 2 1150 1871 166 35 37 chr17 74147495 74147728 -21124923 - MTC LTR MaLR 0 421 191 2 1150 1215 111 136 0 chr17 74147728 74147927 -21124724 - URR1A DNA MER1_type 0 226 1 2 1150 1871 166 35 37 chr17 74147927 74148069 -21124582 - MTC LTR MaLR -231 190 47 2 1150 264 274 113 38 chr17 74148512 74148645 -21124006 + MLT1A1 LTR MaLR 232 408 0 2 1150 537 30 0 0 chr17 74150005 74150072 -21122579 + (TG)n Simple_repeat Simple_repeat 1 67 0 2 1150 486 217 194 0 chr17 74150511 74150640 -21122011 + B3A SINE B2 1 154 -44 2 1150 324 0 0 0 chr17 74150640 74150676 -21121975 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1150 441 0 0 0 chr17 74150676 74150724 -21121927 + (GA)n Simple_repeat Simple_repeat 2 50 0 2 1150 277 309 57 85 chr17 74150897 74151074 -21121577 - L1M5 LINE L1 -509 5731 5560 2 1150 288 253 13 26 chr17 74151253 74151264 -21121387 - ID4 SINE ID -1 82 73 2 1150 378 0 0 0 chr17 74151264 74151306 -21121345 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1150 288 253 13 26 chr17 74151306 74151371 -21121280 - ID4 SINE ID -11 72 7 2 1150 564 312 42 28 chr17 74151522 74151809 -21120842 - B4A SINE B4 -1 291 1 2 1150 180 77 0 0 chr17 74153425 74153451 -21119200 + (TTTTTA)n Simple_repeat Simple_repeat 4 29 0 2 1150 728 79 0 0 chr17 74153461 74153562 -21119089 - B1_Mus2 SINE Alu 0 147 47 2 1150 450 0 0 0 chr17 74155295 74155345 -21117306 + (TAA)n Simple_repeat Simple_repeat 2 51 0 2 1150 1186 48 14 0 chr17 74157304 74157449 -21115202 + B1_Mm SINE Alu 1 147 0 2 1150 273 57 0 0 chr17 74157449 74157484 -21115167 + (A)n Simple_repeat Simple_repeat 1 35 0 2 1150 22 0 0 0 chr17 74157588 74157610 -21115041 + AT_rich Low_complexity Low_complexity 1 22 0 2 1150 762 184 149 0 chr17 74159971 74160112 -21112539 - RSINE1 SINE B4 -2 163 2 2 1150 228 67 0 0 chr17 74161584 74161614 -21111037 + (CATATA)n Simple_repeat Simple_repeat 1 30 0 2 1150 1345 119 30 60 chr17 74162067 74162299 -21110352 + URR1B DNA MER1_type 1 225 0 2 1150 616 256 17 70 chr17 74164729 74164901 -21107750 + RSINE1 SINE B4 3 165 0 2 1150 284 130 37 0 chr17 74165141 74165195 -21107456 + (CATA)n Simple_repeat Simple_repeat 3 58 0 2 1150 203 300 97 32 chr17 74166135 74166228 -21106423 + MIRc SINE MIR 19 117 -151 2 1150 1448 134 9 9 chr17 74166294 74166519 -21106132 - URR1B DNA MER1_type 0 225 1 2 1150 224 322 96 0 chr17 74166682 74166797 -21105854 + MIRb SINE MIR 27 152 -116 2 1150 396 0 0 0 chr17 74167867 74167911 -21104740 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1150 189 333 53 45 chr17 74168544 74168676 -21103975 - L2b LINE L2 -192 3183 3051 2 1150 200 213 21 0 chr17 74169006 74169053 -21103598 + L2b LINE L2 3107 3154 -221 2 1150 534 250 28 0 chr17 74170035 74170143 -21102508 - PB1D10 SINE Alu -6 111 1 2 1150 241 283 165 8 chr17 74174572 74174693 -21097958 - MIRc SINE MIR -69 199 60 2 1150 668 286 0 86 chr17 74174838 74175025 -21097626 + B4 SINE B4 4 174 -118 2 1150 350 297 21 48 chr17 74175844 74175989 -21096662 + B1F2 SINE Alu 1 141 -8 2 1150 351 240 0 0 chr17 74176196 74176271 -21096380 + ID4 SINE ID 5 79 -4 2 1150 203 156 0 0 chr17 74176271 74176303 -21096348 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1150 249 289 52 53 chr17 74176303 74176433 -21096218 - MIRb SINE MIR -125 137 15 2 1150 1182 122 97 5 chr17 74178362 74178568 -21094083 + URR1B DNA MER1_type 1 225 0 2 1150 396 0 0 0 chr17 74179840 74179884 -21092767 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1150 314 365 40 50 chr17 74180542 74180744 -21091907 - MIRb SINE MIR -18 250 51 2 1150 579 15 0 0 chr17 74181990 74182058 -21090593 + (TG)n Simple_repeat Simple_repeat 2 69 0 2 1150 200 321 63 49 chr17 74182729 74182933 -21089718 - L2b LINE L2 -61 3326 3125 2 1150 236 298 0 17 chr17 74182979 74183037 -21089614 + MLT1J LTR MaLR 79 135 -377 2 1150 222 37 0 0 chr17 74183608 74183635 -21089016 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1150 453 36 0 0 chr17 74184036 74184091 -21088560 + (ATG)n Simple_repeat Simple_repeat 1 55 0 2 1150 563 178 0 7 chr17 74184095 74184231 -21088420 + (TG)n Simple_repeat Simple_repeat 2 136 0 2 1150 468 0 0 0 chr17 74184231 74184283 -21088368 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 1150 973 277 45 45 chr17 74184392 74184683 -21087968 + B4A SINE B4 2 292 0 2 1151 354 300 168 20 chr17 74186786 74187043 -21085608 + LTR16A LTR ERVL 108 398 -53 2 1151 250 210 46 46 chr17 74187075 74187140 -21085511 + L2a LINE L2 3361 3425 -1 2 1151 294 98 0 0 chr17 74187517 74187568 -21085083 + (GA)n Simple_repeat Simple_repeat 1 51 0 2 1151 250 163 0 0 chr17 74188641 74188690 -21083961 + L1MC2 LINE L1 6287 6335 -9 2 1151 1113 68 0 0 chr17 74189464 74189611 -21083040 + (TCTCCC)n Simple_repeat Simple_repeat 4 150 0 2 1151 199 280 17 160 chr17 74190699 74190818 -21081833 - MIR SINE MIR -73 189 88 2 1151 477 0 0 0 chr17 74190951 74191004 -21081647 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1151 355 342 0 0 chr17 74192170 74192284 -21080367 - MER81 DNA AcHobo 0 114 1 2 1151 887 279 156 0 chr17 74193213 74193489 -21079162 + MLT1A0 LTR MaLR 1 319 -46 2 1151 249 33 0 0 chr17 74193645 74193675 -21078976 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 2 1151 228 312 40 50 chr17 74194732 74194833 -21077818 + MIRc SINE MIR 63 162 -106 2 1151 337 282 74 98 chr17 74196770 74196919 -21075732 + MLT1I LTR MaLR 62 209 -340 2 1151 310 247 21 113 chr17 74196935 74197033 -21075618 + MLT1I LTR MaLR 317 448 0 2 1151 367 276 20 10 chr17 74197033 74197132 -21075519 - MIR3 SINE MIR -34 174 75 2 1151 204 320 96 44 chr17 74197191 74197419 -21075232 + MIRm SINE MIR 11 254 -22 2 1151 4498 69 11 2 chr17 74197803 74198371 -21074280 + L1_Mus1 LINE L1 5995 6567 0 2 1151 539 284 145 17 chr17 74198613 74198785 -21073866 + MLT1A0 LTR MaLR 1 194 -171 2 1151 2241 83 21 39 chr17 74198806 74199144 -21073507 + L1_Mus3 LINE L1 6282 6613 -25 2 1151 2216 153 78 23 chr17 74199759 74200154 -21072497 - MTC LTR MaLR 0 421 5 2 1151 189 0 0 0 chr17 74201088 74201109 -21071542 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 2 1151 758 208 0 11 chr17 74201437 74201617 -21071034 + GA-rich Low_complexity Low_complexity 3 180 0 2 1151 188 67 0 32 chr17 74201620 74201651 -21071000 + (GGGGA)n Simple_repeat Simple_repeat 4 33 0 2 1151 240 35 0 0 chr17 74201674 74201703 -21070948 + (GGGA)n Simple_repeat Simple_repeat 1 29 0 2 1151 540 224 201 0 chr17 74201755 74201889 -21070762 + ID_B1 SINE B4 6 166 -58 2 1151 258 324 6 137 chr17 74203833 74204001 -21068650 - RLTR33 LTR ERVK -87 591 446 2 1151 976 290 86 20 chr17 74204217 74204680 -21067971 + L1MB5 LINE L1 5643 6168 -6 2 1151 1310 208 85 27 chr17 74204750 74204849 -21067802 - L1_Mur3 LINE L1 -4048 1832 1741 2 1151 2215 147 73 5 chr17 74204849 74205218 -21067433 + ORR1B1 LTR MaLR 1 394 0 2 1151 1310 208 85 27 chr17 74205218 74205483 -21067168 - L1_Mur3 LINE L1 -4140 1740 1447 2 1151 2102 92 3 74 chr17 74205487 74205838 -21066813 - IAPLTR1a_Mm LTR ERVK -11 326 1 2 1151 59292 11 5 0 chr17 74205838 74212296 -21060355 - IAPEz-int LTR ERVK 0 6481 3 2 1151 2114 102 3 72 chr17 74212297 74212657 -21059994 - IAPLTR1a_Mm LTR ERVK -2 335 1 2 1151 914 212 19 68 chr17 74212669 74213090 -21059561 - L1_Mur3 LINE L1 -4430 1450 1047 2 1151 299 319 52 23 chr17 74213408 74213581 -21059070 + LTR89 LTR ERVL? 163 340 -539 2 1151 742 252 69 0 chr17 74214039 74214198 -21058453 + B3 SINE B2 1 170 -46 2 1151 654 315 11 32 chr17 74214200 74214387 -21058264 - B4 SINE B4 -109 183 1 2 1151 229 184 98 39 chr17 74216080 74216131 -21056520 + B1_Mus1 SINE Alu 7 60 -88 2 1151 234 0 0 158 chr17 74216132 74216246 -21056405 + (CAGAG)n Simple_repeat Simple_repeat 5 100 0 2 1151 418 171 49 0 chr17 74216249 74216331 -21056320 + B1_Mus2 SINE Alu 42 127 -20 3 1151 578 80 0 22 chr17 74216432 74216522 -21056129 + (TATG)n Simple_repeat Simple_repeat 3 90 0 3 1151 2145 36 4 0 chr17 74216522 74216775 -21055876 + L1Md_T LINE L1 6327 6580 -2 3 1151 527 103 0 22 chr17 74216779 74216868 -21055783 + (TATG)n Simple_repeat Simple_repeat 4 90 0 3 1151 701 278 74 0 chr17 74216881 74217043 -21055608 - B3A SINE B2 -22 176 3 3 1151 227 329 118 0 chr17 74217060 74217145 -21055506 + RMER30 DNA MER1_type 108 202 0 3 1151 260 310 103 69 chr17 74218691 74218923 -21053728 + LTR16A LTR ERVL 24 263 -188 3 1151 940 293 61 68 chr17 74219032 74219432 -21053219 - L1MC1 LINE L1 -143 6190 5793 3 1151 976 150 169 10 chr17 74219432 74219627 -21053024 + URR1A DNA MER1_type 1 226 0 3 1151 940 293 61 68 chr17 74219627 74219651 -21053000 - L1MC1 LINE L1 -541 5792 5769 3 1151 301 272 63 16 chr17 74220785 74220912 -21051739 - L1MC1 LINE L1 -548 5785 5653 3 1151 194 265 20 0 chr17 74221012 74221061 -21051590 + MIRb SINE MIR 179 228 -40 3 1151 348 24 0 0 chr17 74221182 74221223 -21051428 + (TTG)n Simple_repeat Simple_repeat 2 42 0 3 1151 1079 64 0 7 chr17 74221223 74221359 -21051292 - B1_Mus1 SINE Alu -10 138 3 3 1151 268 159 137 55 chr17 74221371 74221418 -21051233 - MTE2a LTR MaLR -9 370 315 3 1151 186 71 0 0 chr17 74221418 74221446 -21051205 + (TTG)n Simple_repeat Simple_repeat 2 29 0 3 1151 268 159 137 55 chr17 74221446 74221471 -21051180 - MTE2a LTR MaLR -65 314 292 3 1151 436 343 11 68 chr17 74221820 74222011 -21050640 + B4 SINE B4 102 281 -11 3 1151 352 263 25 58 chr17 74222040 74222161 -21050490 - MER3 DNA MER1_type -29 180 64 3 1151 261 320 38 3 chr17 74222225 74222375 -21050276 + L2b LINE L2 3082 3239 -148 3 1151 229 239 106 81 chr17 74223125 74223248 -21049403 + MER5A DNA MER1_type 35 160 -29 3 1151 249 186 49 33 chr17 74223652 74223713 -21048938 + MTEa LTR MaLR 300 361 -18 3 1151 1859 193 29 156 chr17 74224011 74224073 -21048578 - MTD LTR MaLR 0 419 363 3 1151 2385 113 0 0 chr17 74224073 74224400 -21048251 + ORR1A2 LTR MaLR 1 327 0 3 1151 1859 193 29 156 chr17 74224400 74224817 -21047834 - MTD LTR MaLR -57 362 1 3 1151 260 291 70 113 chr17 74224817 74224954 -21047697 + Charlie20a DNA Charlie 617 745 -62 3 1151 294 269 0 0 chr17 74226058 74226125 -21046526 - ID4 SINE ID -13 70 4 3 1151 189 94 0 0 chr17 74226530 74226562 -21046089 + (A)n Simple_repeat Simple_repeat 1 32 0 3 1151 335 283 8 38 chr17 74226576 74226708 -21045943 + L1M5 LINE L1 5698 5825 -299 3 1151 348 229 230 60 chr17 74227192 74227392 -21045259 + MLT1E2 LTR MaLR 3 236 -391 3 1151 766 128 143 2 chr17 74227425 74227577 -21045074 - ORR1A2 LTR MaLR -149 197 1 3 1151 500 294 17 50 chr17 74227582 74227761 -21044890 + B4A SINE B4 69 241 -51 3 1151 194 174 0 21 chr17 74228405 74228452 -21044199 + A-rich Low_complexity Low_complexity 5 50 0 3 1151 390 203 0 75 chr17 74228900 74228980 -21043671 - tRNA-Ala-GCY_ tRNA tRNA 0 75 2 3 1151 221 30 0 57 chr17 74228996 74229031 -21043620 + (CCCCCA)n Simple_repeat Simple_repeat 3 35 0 3 1151 234 368 0 28 chr17 74229031 74229140 -21043511 - MIRb SINE MIR -62 206 101 3 1151 414 0 0 0 chr17 74229342 74229388 -21043263 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1151 223 356 81 48 chr17 74230401 74230587 -21042064 + MIR3 SINE MIR 2 193 -15 3 1151 262 406 0 0 chr17 74231356 74231462 -21041189 + MIRb SINE MIR 147 252 -16 3 1151 547 306 130 0 chr17 74232136 74232324 -21040327 + ID_B1 SINE B4 8 222 -2 3 1151 432 97 0 0 chr17 74232390 74232452 -21040199 + (TG)n Simple_repeat Simple_repeat 2 63 0 3 1151 207 306 106 18 chr17 74232901 74233014 -21039637 - MIR3 SINE MIR -3 205 83 3 1151 359 253 76 0 chr17 74234781 74234860 -21037791 + URR1A DNA MER1_type 6 90 -136 3 1151 243 35 0 0 chr17 74234883 74234912 -21037739 + URR1A DNA MER1_type 64 92 -134 3 1151 228 37 0 0 chr17 74234915 74234942 -21037709 + URR1A DNA MER1_type 64 90 -136 3 1151 243 35 0 0 chr17 74234965 74234994 -21037657 + URR1A DNA MER1_type 64 92 -134 3 1151 384 121 15 15 chr17 74235029 74235096 -21037555 + URR1A DNA MER1_type 64 130 -96 3 1151 3018 44 7 81 chr17 74236005 74236426 -21036225 - RLTR10 LTR ERVK 0 390 1 3 1151 9110 15 0 1 chr17 74236428 74237424 -21035227 - RLTR10-int LTR ERVK -3 1984 990 3 1151 327 268 46 23 chr17 74237506 74237636 -21035015 - RLTR10-int LTR ERVK -5987 1594 1462 3 1151 8592 36 1 2 chr17 74237700 74238697 -21033954 - RLTR10-int LTR ERVK -989 998 3 3 1151 3041 39 7 81 chr17 74238699 74239120 -21033531 - RLTR10 LTR ERVK 0 390 1 3 1151 570 272 15 7 chr17 74239310 74239447 -21033204 - B1F1 SINE Alu -11 138 1 3 1151 221 347 31 21 chr17 74239637 74239734 -21032917 + MER5A DNA MER1_type 27 124 -65 3 1151 414 0 0 0 chr17 74241226 74241272 -21031379 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1151 233 211 39 0 chr17 74241664 74241716 -21030935 + CT-rich Low_complexity Low_complexity 1 54 0 3 1151 285 128 0 0 chr17 74241727 74241774 -21030877 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1151 282 232 0 28 chr17 74242513 74242584 -21030067 + ID4_ SINE ID 1 69 -14 3 1151 257 265 160 51 chr17 74242606 74242781 -21029870 + Cheshire DNA MER1_type 91 284 -2136 3 1151 528 167 10 19 chr17 74243946 74244041 -21028610 + ORR1B1 LTR MaLR 1 96 -298 3 1151 216 0 0 0 chr17 74244041 74244065 -21028586 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1151 528 143 2071 58 chr17 74244065 74244079 -21028572 + ORR1B1 LTR MaLR 97 103 -291 3 1151 1256 223 70 104 chr17 74244149 74244535 -21028116 + MTE2a LTR MaLR 2 374 -5 3 1151 256 208 0 20 chr17 74245194 74245243 -21027408 - MIRc SINE MIR -107 161 114 3 1151 486 0 0 0 chr17 74245651 74245705 -21026946 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 1151 224 275 0 0 chr17 74245705 74245745 -21026906 - ID4_ SINE ID -4 79 40 3 1151 293 273 124 11 chr17 74245752 74245841 -21026810 - PB1D10 SINE Alu -2 115 17 3 1151 235 191 0 21 chr17 74246242 74246290 -21026361 - L1_Mus2 LINE L1 -175 6391 6345 3 1151 384 198 24 47 chr17 74248406 74248491 -21024160 - PB1D9 SINE Alu -16 104 22 3 1151 2511 67 12 12 chr17 74248556 74248891 -21023760 - L1Md_F2 LINE L1 -1 6581 6247 3 1151 234 0 0 0 chr17 74249146 74249172 -21023479 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1151 374 322 25 44 chr17 74249172 74249331 -21023320 - MIRc SINE MIR -89 179 24 3 1151 426 174 97 0 chr17 74250353 74250497 -21022154 + Lx9 LINE L1 7487 7644 0 3 1151 300 81 0 0 chr17 74250784 74250821 -21021830 - HAL1-3A_ME LINE L1 -849 2009 1973 3 1151 545 182 20 51 chr17 74250822 74251077 -21021574 + (TATATG)n Simple_repeat Simple_repeat 1 246 0 3 1151 354 222 0 61 chr17 74251078 74251193 -21021458 + (TG)n Simple_repeat Simple_repeat 2 109 0 3 1151 326 221 47 12 chr17 74251197 74251366 -21021285 + (TATG)n Simple_repeat Simple_repeat 2 176 0 3 1151 423 38 0 0 chr17 74251642 74251695 -21020956 + (TC)n Simple_repeat Simple_repeat 1 53 0 3 1151 3049 39 3 0 chr17 74252108 74252471 -21020180 - L1Md_T LINE L1 -1 6581 6218 3 1151 547 255 35 14 chr17 74252565 74252708 -21019943 - RSINE1 SINE B4 -19 146 1 3 1151 754 65 59 12 chr17 74252956 74253126 -21019525 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 3 1151 234 91 0 0 chr17 74253142 74253175 -21019476 + (GA)n Simple_repeat Simple_repeat 2 34 0 3 1151 381 332 57 78 chr17 74253198 74253479 -21019172 + L1MDa LINE L1 116 390 -6243 3 1151 339 202 0 0 chr17 74253480 74253574 -21019077 + (CA)n Simple_repeat Simple_repeat 2 95 0 3 1151 322 408 46 33 chr17 74253578 74253882 -21018769 + L1MDa LINE L1 399 706 -5927 3 1151 856 133 0 123 chr17 74254047 74254210 -21018441 + ORR1C1 LTR MaLR 5 147 -231 3 1151 707 249 86 64 chr17 74254227 74254694 -21017957 + L1MDa LINE L1 2562 3038 -3499 3 1151 485 209 141 67 chr17 74254881 74255030 -21017621 + MER57C2 LTR ERV1 249 431 -3 3 1151 236 100 25 0 chr17 74255070 74255110 -21017541 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 1151 180 0 0 0 chr17 74255470 74255490 -21017161 + (TCTG)n Simple_repeat Simple_repeat 3 22 0 3 1151 1359 225 134 11 chr17 74257143 74257516 -21015135 + MTD LTR MaLR 1 419 0 3 1151 313 247 114 34 chr17 74257960 74258048 -21014603 + MT2B LTR ERVL 163 257 -344 3 1151 572 63 101 0 chr17 74257993 74258072 -21014579 + B1_Mus2 SINE Alu 48 134 -13 3 1151 854 93 16 0 chr17 74258073 74258202 -21014449 + (GAAA)n Simple_repeat Simple_repeat 1 131 0 3 1151 537 16 0 0 chr17 74258202 74258264 -21014387 + (GAGAA)n Simple_repeat Simple_repeat 1 62 0 3 1151 897 274 35 15 chr17 74259055 74259314 -21013337 - Tigger5 DNA MER2_type -1 2405 2142 3 1151 1204 133 117 0 chr17 74260059 74260255 -21012396 + URR1A DNA MER1_type 1 219 -7 3 1151 306 0 0 0 chr17 74260401 74260435 -21012216 + (TC)n Simple_repeat Simple_repeat 2 35 0 3 1151 484 89 25 0 chr17 74260435 74260513 -21012138 + (TG)n Simple_repeat Simple_repeat 2 82 0 3 1151 623 311 104 0 chr17 74260554 74260737 -21011914 - B4A SINE B4 -82 210 9 3 1151 531 0 0 0 chr17 74261100 74261159 -21011492 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 1151 504 0 0 0 chr17 74262485 74262541 -21010110 + (GAAA)n Simple_repeat Simple_repeat 1 56 0 3 1151 1178 73 12 0 chr17 74262541 74262705 -21009946 + (GAGAA)n Simple_repeat Simple_repeat 2 168 0 3 1151 484 309 147 60 chr17 74263491 74263905 -21008746 + L1ME4a LINE L1 5665 6114 -10 3 1151 208 309 118 89 chr17 74264085 74264220 -21008431 - MIR SINE MIR -93 169 31 3 1151 567 241 67 134 chr17 74264328 74264567 -21008084 - ID_B1 SINE B4 -1 223 1 3 1151 207 171 0 0 chr17 74264697 74264732 -21007919 + (CATG)n Simple_repeat Simple_repeat 2 36 0 3 1151 417 271 5 43 chr17 74265183 74265368 -21007283 + C-rich Low_complexity Low_complexity 1 178 0 3 1151 223 202 11 55 chr17 74265372 74265555 -21007096 + CT-rich Low_complexity Low_complexity 4 178 0 3 1151 259 264 137 42 chr17 74266384 74266479 -21006172 + MIRc SINE MIR 41 144 -124 3 1151 567 0 0 0 chr17 74266505 74266568 -21006083 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 3 1151 21 57 0 0 chr17 74266595 74266630 -21006021 + AT_rich Low_complexity Low_complexity 1 35 0 3 1151 455 236 168 6 chr17 74266630 74266809 -21005842 - Lx9 LINE L1 -15 7629 7422 3 1151 255 309 55 39 chr17 74266851 74266979 -21005672 - MIRb SINE MIR -36 232 103 3 1151 261 290 0 0 chr17 74267013 74267082 -21005569 + (TAG)n Simple_repeat Simple_repeat 2 70 0 4 1151 296 318 0 43 chr17 74267216 74267403 -21005248 + (TAG)n Simple_repeat Simple_repeat 2 180 0 4 1151 226 323 39 46 chr17 74269405 74269535 -21003116 - MIRc SINE MIR -49 219 91 4 1151 933 269 34 36 chr17 74269882 74270305 -21002346 + Lx8 LINE L1 5504 5972 -1672 4 1151 185 310 119 42 chr17 74272775 74272893 -20999758 - MIR SINE MIR -50 212 86 4 1151 468 285 88 0 chr17 74272925 74273062 -20999589 - RSINE1 SINE B4 -13 152 4 4 1151 186 179 26 0 chr17 74274061 74274100 -20998551 - MIRb SINE MIR -198 70 31 4 1151 241 282 42 0 chr17 74277382 74277453 -20995198 + L1MCa LINE L1 1539 1612 -4896 4 1151 257 342 51 26 chr17 74277498 74277615 -20995036 + B1F1 SINE Alu 18 137 -12 4 1151 387 257 35 149 chr17 74277558 74277625 -20995026 + B4 SINE B4 42 219 -73 4 1151 830 172 15 0 chr17 74277625 74277759 -20994892 + B1_Mur4 SINE Alu 8 143 -7 4 1151 270 0 0 0 chr17 74278282 74278312 -20994339 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 4 1151 1946 235 99 33 chr17 74278549 74278689 -20993962 - L1MCa LINE L1 -2781 3540 3391 4 1151 189 0 0 0 chr17 74278689 74278710 -20993941 + (TA)n Simple_repeat Simple_repeat 2 22 0 4 1151 1946 235 99 33 chr17 74278710 74279348 -20993303 - L1MCa LINE L1 -2931 3390 2712 4 1151 3789 98 18 16 chr17 74279365 74279916 -20992735 - L1_Mus3 LINE L1 -239 6397 5846 4 1151 1725 94 8 41 chr17 74279916 74280183 -20992468 + L1_Mus3 LINE L1 6381 6638 0 4 1151 376 260 5 2 chr17 74280463 74280594 -20992057 - B1F2 SINE Alu -3 147 17 4 1151 1475 273 163 17 chr17 74280828 74281578 -20991073 - L1MCa LINE L1 -5108 1400 542 4 1151 612 0 0 0 chr17 74281578 74281646 -20991005 + (ATATG)n Simple_repeat Simple_repeat 3 70 0 4 1151 285 327 106 12 chr17 74281764 74281934 -20990717 - L1MCa LINE L1 -6322 186 1 4 1151 414 85 0 0 chr17 74282669 74282728 -20989923 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1151 769 202 167 25 chr17 74284744 74284942 -20987709 + URR1A DNA MER1_type 1 226 0 4 1151 231 61 0 0 chr17 74285667 74285700 -20986951 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 4 1151 251 239 68 40 chr17 74285710 74285784 -20986867 - B1F1 SINE Alu -51 98 23 4 1151 351 345 145 31 chr17 74286684 74287202 -20985449 - L2 LINE L2 -545 2874 2298 4 1151 532 288 76 6 chr17 74287972 74288143 -20984508 - ID_B1 SINE B4 -41 183 1 4 1151 926 298 41 54 chr17 74288205 74288521 -20984130 + MTE2b LTR MaLR 9 320 -59 4 1151 304 346 44 57 chr17 74289728 74289955 -20982696 - L2c LINE L2 -30 3357 3134 4 1151 276 311 67 13 chr17 74292073 74292223 -20980428 + MIRb SINE MIR 102 259 -9 4 1151 867 174 174 26 chr17 74292352 74292404 -20980247 - URR1A DNA MER1_type 0 226 160 4 1151 414 0 0 0 chr17 74292404 74292450 -20980201 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 4 1151 867 174 174 26 chr17 74292450 74292592 -20980059 - URR1A DNA MER1_type -67 159 5 4 1151 250 293 39 39 chr17 74292701 74292779 -20979872 + ID4 SINE ID 6 83 0 4 1151 239 209 29 29 chr17 74294997 74295066 -20977585 + (TG)n Simple_repeat Simple_repeat 1 69 0 4 1151 231 36 0 0 chr17 74295068 74295096 -20977555 + (CATA)n Simple_repeat Simple_repeat 3 30 0 4 1151 405 0 0 0 chr17 74295112 74295157 -20977494 + (TAGA)n Simple_repeat Simple_repeat 3 47 0 4 1151 684 302 49 13 chr17 74295159 74295384 -20977267 - B4A SINE B4 -59 233 1 4 1151 23 33 0 0 chr17 74295676 74295706 -20976945 + AT_rich Low_complexity Low_complexity 1 30 0 4 1151 450 0 0 0 chr17 74295923 74295973 -20976678 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1151 612 0 0 0 chr17 74296140 74296208 -20976443 + (TC)n Simple_repeat Simple_repeat 1 68 0 4 1151 322 285 118 75 chr17 74296399 74296585 -20976066 + ORR1E LTR MaLR 8 201 -158 4 1151 204 40 0 0 chr17 74296678 74296703 -20975948 + (TTCC)n Simple_repeat Simple_repeat 3 27 0 4 1151 344 203 0 72 chr17 74296784 74296853 -20975798 + RSINE1 SINE B4 3 66 -99 4 1151 192 125 0 0 chr17 74296861 74296893 -20975758 + (TC)n Simple_repeat Simple_repeat 1 32 0 4 1151 423 87 0 0 chr17 74296903 74296972 -20975679 + (GA)n Simple_repeat Simple_repeat 2 70 0 4 1151 645 162 0 0 chr17 74297066 74297177 -20975474 + PB1D9 SINE Alu 9 119 -1 4 1151 203 152 22 0 chr17 74297184 74297230 -20975421 + GA-rich Low_complexity Low_complexity 3 49 0 4 1151 225 0 0 0 chr17 74298314 74298339 -20974312 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1151 321 262 22 109 chr17 74300817 74300852 -20971799 + MER20 DNA MER1_type 88 114 -105 4 1151 465 34 0 0 chr17 74300852 74300911 -20971740 + (ATG)n Simple_repeat Simple_repeat 1 59 0 4 1151 321 262 22 109 chr17 74300911 74301012 -20971639 + MER20 DNA MER1_type 115 212 -7 4 1151 203 305 11 0 chr17 74301907 74302002 -20970649 + T-rich Low_complexity Low_complexity 2 97 0 4 1151 373 333 71 16 chr17 74302962 74303145 -20969506 + B4A SINE B4 3 195 -97 4 1151 2000 300 108 43 chr17 74303190 74304680 -20967971 + Lx7 LINE L1 1471 3039 -3104 4 1151 1086 61 176 0 chr17 74304680 74304845 -20967806 + B2_Mm2 SINE B2 2 195 0 4 1151 2000 296 108 30 chr17 74304845 74305395 -20967256 + Lx7 LINE L1 3005 3606 -2537 4 1151 896 304 86 8 chr17 74305397 74305651 -20967000 + Lx7 LINE L1 5443 5727 -153 4 1151 908 164 64 21 chr17 74305651 74305838 -20966813 + L1Md_F2 LINE L1 6388 6582 0 4 1151 896 294 131 42 chr17 74305838 74306045 -20966606 + Lx7 LINE L1 5728 5952 -1744 4 1151 1186 220 107 25 chr17 74306045 74306400 -20966251 - ORR1C2 LTR MaLR 0 384 1 4 1151 588 294 131 42 chr17 74306400 74306644 -20966007 + Lx7 LINE L1 5953 6202 -1494 4 1151 411 288 173 11 chr17 74306913 74307190 -20965461 - L1MA7 LINE L1 -5 6286 5965 4 1151 509 305 33 81 chr17 74307329 74307817 -20964834 - L1MA7 LINE L1 -978 5165 4700 4 1151 1012 191 0 33 chr17 74307919 74308103 -20964548 + B3A SINE B2 5 182 -16 4 1151 249 33 0 0 chr17 74308306 74308336 -20964315 + (ATTG)n Simple_repeat Simple_repeat 2 31 0 4 1151 969 270 81 15 chr17 74308345 74308616 -20964035 - Lx8 LINE L1 -160 7313 7025 4 1151 189 74 0 0 chr17 74308659 74308686 -20963965 + (GGTTG)n Simple_repeat Simple_repeat 2 28 0 4 1151 4502 82 16 13 chr17 74308686 74309308 -20963343 - L1_Mus4 LINE L1 0 6636 6013 4 1151 5047 95 3 1 chr17 74309310 74310191 -20962460 + L1_Mus4 LINE L1 5129 6012 -624 4 1151 297 0 0 0 chr17 74310700 74310733 -20961918 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 1151 631 201 79 0 chr17 74310734 74310873 -20961778 - B1_Mur4 SINE Alu 0 150 1 4 1151 287 246 68 122 chr17 74310873 74310926 -20961725 - MT2B LTR ERVL -439 162 118 4 1151 260 210 0 16 chr17 74310987 74311050 -20961601 + B4 SINE B4 1 62 -230 4 1151 671 305 120 25 chr17 74311084 74311410 -20961241 - L1M3e LINE L1 -5169 1861 1505 4 1151 565 309 51 32 chr17 74311453 74311764 -20960887 - L1M3e LINE L1 -6678 352 1 4 1151 183 329 0 73 chr17 74312660 74312742 -20959909 - MIR SINE MIR -69 193 118 4 1151 243 394 0 46 chr17 74313972 74314081 -20958570 + MLT1J1 LTR MaLR 199 302 -142 4 1151 682 294 16 16 chr17 74314196 74314386 -20958265 + Tigger7 DNA MER2_type 1 190 -2301 4 1151 359 261 86 9 chr17 74314404 74314520 -20958131 + Tigger7 DNA MER2_type 279 403 -2088 4 1151 231 270 16 0 chr17 74314523 74314586 -20958065 + Tigger7 DNA MER2_type 2382 2445 -46 4 1151 6824 16 0 0 chr17 74314786 74315536 -20957115 - MERVL-int LTR ERVL -2731 2754 2005 4 1151 4627 185 63 11 chr17 74315941 74316975 -20955676 + Lx4B LINE L1 5876 6967 -33 4 1151 441 0 0 0 chr17 74316978 74317027 -20955624 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 4 1151 234 0 0 0 chr17 74317328 74317354 -20955297 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 1151 1073 107 6 18 chr17 74317397 74317568 -20955083 - URR1A DNA MER1_type 0 226 58 4 1151 436 268 142 0 chr17 74317600 74317790 -20954861 - MER2 DNA MER2_type -104 241 25 4 143 857 266 24 129 chr17 74317812 74318230 -20954421 + MTE2a LTR MaLR 3 376 -3 4 1152 1914 297 131 103 chr17 74318236 74319445 -20953206 + MTE2a-int LTR MaLR 18 1580 0 4 1152 237 108 0 0 chr17 74319585 74319622 -20953029 + (TCC)n Simple_repeat Simple_repeat 2 38 0 4 1152 411 73 0 0 chr17 74319632 74319687 -20952964 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 1152 32 43 0 0 chr17 74322940 74322986 -20949665 + AT_rich Low_complexity Low_complexity 1 46 0 4 1152 298 311 109 45 chr17 74323177 74323554 -20949097 - L1ME2 LINE L1 -3 6161 5761 4 1152 257 366 0 13 chr17 74323581 74323736 -20948915 - L1ME2 LINE L1 -543 5621 5469 4 1152 212 69 49 49 chr17 74323876 74323937 -20948714 + T-rich Low_complexity Low_complexity 5 65 0 4 1152 747 264 0 56 chr17 74324196 74324240 -20948411 + RMER30 DNA MER1_type 1 39 -163 4 1152 2374 159 26 31 chr17 74324240 74324663 -20947988 + MTC LTR MaLR 1 421 0 4 1152 747 264 0 56 chr17 74324663 74324831 -20947820 + RMER30 DNA MER1_type 40 201 -1 4 1152 474 292 95 29 chr17 74324832 74325075 -20947576 - L1ME2 LINE L1 -1338 4808 4550 4 1152 487 270 30 60 chr17 74325852 74326053 -20946598 - ORR1E LTR MaLR -164 195 1 4 1152 417 319 70 23 chr17 74326996 74327295 -20945356 - L1ME2 LINE L1 -3894 2272 1960 4 1152 27 62 0 0 chr17 74327570 74327618 -20945033 + AT_rich Low_complexity Low_complexity 1 48 0 4 1152 8442 67 19 20 chr17 74327639 74329321 -20943330 - L1_Mus2 LINE L1 0 6566 4877 4 1152 570 27 0 39 chr17 74329321 74329399 -20943252 + L1_Mus2 LINE L1 6492 6566 0 4 1152 8442 86 13 39 chr17 74329399 74329591 -20943060 - L1_Mus2 LINE L1 -1007 4876 4706 4 1152 674 207 0 6 chr17 74329631 74329811 -20942840 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 1152 583 229 16 6 chr17 74329774 74330086 -20942565 + (TATG)n Simple_repeat Simple_repeat 1 314 0 4 1152 397 358 7 49 chr17 74330091 74330235 -20942416 - RSINE1 SINE B4 0 165 28 4 1152 1053 102 0 0 chr17 74330467 74330624 -20942027 + (GGAA)n Simple_repeat Simple_repeat 1 157 0 4 1152 767 307 25 14 chr17 74331215 74331496 -20941155 + B4A SINE B4 2 285 -7 4 1152 256 227 15 0 chr17 74331595 74331661 -20940990 - L1MB3 LINE L1 -2 6181 6115 4 1152 1130 299 15 21 chr17 74331650 74332053 -20940598 + Lx9 LINE L1 6886 7429 -215 4 1152 24 0 0 0 chr17 74332224 74332248 -20940403 + AT_rich Low_complexity Low_complexity 1 24 0 4 1152 4318 127 31 1 chr17 74332277 74332931 -20939720 + Lx4A LINE L1 6380 7052 -6 4 1152 219 69 0 0 chr17 74332931 74332960 -20939691 + (TAA)n Simple_repeat Simple_repeat 2 30 0 4 1152 1146 269 76 15 chr17 74332970 74333367 -20939284 - L1MB3 LINE L1 -62 6121 5701 4 1152 576 0 0 0 chr17 74334191 74334255 -20938396 + (TCC)n Simple_repeat Simple_repeat 1 64 0 4 1152 338 261 82 32 chr17 74335200 74335358 -20937293 + MamRep605 Unknown Unknown 229 394 -482 4 1152 343 318 23 0 chr17 74335434 74335563 -20937088 + MamRep605 Unknown Unknown 535 666 -210 4 1152 216 0 0 0 chr17 74335748 74335772 -20936879 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1152 1106 59 0 0 chr17 74335773 74335909 -20936742 - B1_Mus1 SINE Alu -12 136 1 4 1152 347 185 0 0 chr17 74336307 74336372 -20936279 - HAL1-3A_ME LINE L1 -818 2040 1976 4 1152 234 125 0 0 chr17 74336372 74336420 -20936231 + (TCTG)n Simple_repeat Simple_repeat 4 51 0 4 1152 434 245 50 23 chr17 74336496 74336651 -20936000 - B4 SINE B4 -51 241 50 5 1152 462 345 82 0 chr17 74336650 74336870 -20935781 - MLT1F LTR MaLR -123 425 188 5 1152 252 0 0 0 chr17 74337028 74337056 -20935595 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 1152 204 390 103 6 chr17 74337135 74337475 -20935176 - L2 LINE L2 -928 2491 2119 5 1152 1905 174 42 0 chr17 74337555 74337916 -20934735 - MTC LTR MaLR -45 376 1 5 1152 206 390 68 0 chr17 74338317 74338435 -20934216 + L2b LINE L2 3196 3321 -54 5 1152 253 247 85 12 chr17 74338541 74338623 -20934028 - MIR SINE MIR -75 187 100 5 1152 337 299 10 0 chr17 74339014 74339111 -20933540 - MIR SINE MIR -157 105 8 5 1152 513 0 0 0 chr17 74339643 74339700 -20932951 + (TTTTG)n Simple_repeat Simple_repeat 1 57 0 5 1152 285 299 26 0 chr17 74339852 74339929 -20932722 - ID_B1 SINE B4 -132 92 14 5 1152 985 221 48 37 chr17 74340642 74340910 -20931741 + RLTR16 LTR ERVK 1 271 -234 5 1152 275 145 0 98 chr17 74341372 74341433 -20931218 - ID SINE ID -167 57 3 5 1152 2177 172 72 37 chr17 74342509 74342968 -20929683 - Lx4B LINE L1 -4 7054 6580 5 1152 601 335 98 9 chr17 74343177 74343502 -20929149 + ERVL-E-int LTR ERVL 2933 3286 -2381 5 1152 425 348 90 28 chr17 74343822 74344212 -20928439 - ERVL-E-int LTR ERVL -3453 2214 1801 5 1152 830 280 46 8 chr17 74344252 74344511 -20928140 + B4 SINE B4 5 273 -19 5 1152 504 77 0 0 chr17 74344515 74344593 -20928058 + (TC)n Simple_repeat Simple_repeat 2 79 0 5 1152 252 0 0 0 chr17 74344593 74344621 -20928030 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1152 2406 221 28 24 chr17 74344650 74345156 -20927495 - RLTR18B LTR ERVK -4 508 1 5 1152 382 279 65 39 chr17 74346044 74346197 -20926454 - MLT1B LTR MaLR -6 384 228 5 1152 402 291 35 90 chr17 74346197 74346397 -20926254 - MLT2B4 LTR ERVL 0 567 379 5 1152 7832 70 6 12 chr17 74346439 74347955 -20924696 + L1_Mus1 LINE L1 5062 6567 0 5 1152 253 104 0 20 chr17 74347941 74347990 -20924661 - MusHAL1 LINE L1 -9 2703 2656 5 1152 568 272 172 28 chr17 74348014 74348264 -20924387 - MLT2B4 LTR ERVL -257 299 14 5 1152 575 251 169 20 chr17 74348267 74348462 -20924189 - MLT1B LTR MaLR -165 225 2 5 1152 635 225 11 30 chr17 74348474 74348657 -20923994 - MTD LTR MaLR -14 405 204 5 1152 819 280 61 29 chr17 74348643 74348922 -20923729 - MTD LTR MaLR -127 292 5 5 1152 2261 177 37 2 chr17 74349467 74349870 -20922781 - MTC LTR MaLR 0 421 5 5 1152 205 210 129 0 chr17 74350129 74350191 -20922460 - L2 LINE L2 -556 2863 2794 5 1152 4496 180 67 81 chr17 74350552 74351550 -20921101 + RMER1A Other Other 45 1028 -2 5 1152 1461 196 68 26 chr17 74351767 74352118 -20920533 - MTD LTR MaLR -4 415 50 5 1152 194 356 60 16 chr17 74352439 74352690 -20919961 + L2 LINE L2 2566 2827 -592 5 1152 306 0 0 0 chr17 74352883 74352917 -20919734 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1152 519 267 0 28 chr17 74354055 74354163 -20918488 + RSINE1 SINE B4 3 107 -58 5 1152 22 35 0 0 chr17 74354207 74354236 -20918415 + AT_rich Low_complexity Low_complexity 1 29 0 5 1152 423 292 38 15 chr17 74354236 74354368 -20918283 + Lx8 LINE L1 6505 6639 -834 5 1152 888 245 150 4 chr17 74354429 74354481 -20918170 + Lx8 LINE L1 6904 6954 -519 5 1152 243 0 0 0 chr17 74354481 74354508 -20918143 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1152 888 261 317 71 chr17 74354508 74354858 -20917793 + Lx8 LINE L1 6955 7399 -74 5 1152 5208 196 63 33 chr17 74354892 74356042 -20916609 + Lx7 LINE L1 6513 7696 0 5 1152 390 129 0 0 chr17 74356232 74356294 -20916357 + (TTCGG)n Simple_repeat Simple_repeat 5 66 0 5 1152 1898 135 65 160 chr17 74357840 74358333 -20914318 - RLTR41 LTR ERV1 0 446 1 5 1152 226 149 42 34 chr17 74358832 74358919 -20913732 + (TTATA)n Simple_repeat Simple_repeat 2 88 0 5 1152 3114 61 8 5 chr17 74358919 74359314 -20913337 + MTA_Mm LTR MaLR 1 396 0 5 1152 226 149 42 34 chr17 74359314 74359344 -20913307 + (TTATA)n Simple_repeat Simple_repeat 5 36 0 5 1152 348 215 28 44 chr17 74359350 74359567 -20913084 + (TATAA)n Simple_repeat Simple_repeat 1 213 0 5 1152 243 0 0 0 chr17 74359567 74359594 -20913057 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 5 1152 26589 35 4 0 chr17 74359599 74363426 -20909225 - L1Md_F2 LINE L1 -13 6569 2728 5 1152 261 261 43 0 chr17 74363438 74363507 -20909144 - ID4_ SINE ID -10 73 2 5 1152 1051 153 108 42 chr17 74364679 74364891 -20907760 + URR1A DNA MER1_type 1 226 0 5 1152 1001 173 6 6 chr17 74365005 74365185 -20907466 + URR1A DNA MER1_type 5 184 -42 5 1152 612 40 0 0 chr17 74365840 74365915 -20906736 + (TA)n Simple_repeat Simple_repeat 2 76 0 5 1152 927 165 0 0 chr17 74366078 74366254 -20906397 + (TTGG)n Simple_repeat Simple_repeat 4 179 0 5 1152 444 295 0 0 chr17 74366524 74366663 -20905988 - Lx8 LINE L1 -1553 5920 5782 5 1152 397 265 0 11 chr17 74367301 74367413 -20905238 + L1MB3 LINE L1 6062 6171 -12 5 1152 1508 272 69 101 chr17 74367498 74368221 -20904430 + Lx8 LINE L1 6591 7290 -183 5 1152 535 283 20 41 chr17 74368278 74368473 -20904178 + B3A SINE B2 2 192 -6 5 1152 663 312 113 44 chr17 74368718 74369151 -20903500 + MLT1C LTR MaLR 4 466 -1 5 1152 810 260 68 71 chr17 74370378 74370701 -20901950 + MTE2a LTR MaLR 58 379 0 5 1152 385 298 82 64 chr17 74371664 74371897 -20900754 + ORR1E LTR MaLR 1 237 -122 5 1152 675 272 40 48 chr17 74372613 74372864 -20899787 + B4A SINE B4 42 290 -2 5 1152 22 0 0 0 chr17 74372875 74372897 -20899754 + AT_rich Low_complexity Low_complexity 1 22 0 5 1152 264 77 0 0 chr17 74373454 74373493 -20899158 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1152 690 234 13 0 chr17 74373512 74373666 -20898985 - ID_B1 SINE B4 -67 157 2 5 1152 279 209 8 42 chr17 74373979 74374019 -20898632 + T-rich Low_complexity Low_complexity 82 118 0 5 1152 342 0 0 0 chr17 74374019 74374057 -20898594 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 5 1152 279 209 8 42 chr17 74374057 74374136 -20898515 + T-rich Low_complexity Low_complexity 3 81 0 5 1152 278 256 134 17 chr17 74374440 74374559 -20898092 + B4 SINE B4 7 139 -153 5 1152 225 183 48 24 chr17 74374579 74374663 -20897988 + (TA)n Simple_repeat Simple_repeat 1 86 0 5 1152 300 298 0 23 chr17 74374677 74374763 -20897888 + B4 SINE B4 196 279 -13 5 1152 393 109 0 0 chr17 74374766 74374830 -20897821 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 1152 23 33 0 0 chr17 74374879 74374909 -20897742 + AT_rich Low_complexity Low_complexity 1 30 0 5 1152 434 286 17 0 chr17 74375103 74375222 -20897429 - Lx7 LINE L1 -386 7310 7190 5 1152 180 77 0 0 chr17 74375262 74375288 -20897363 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 5 1152 22 35 0 0 chr17 74375299 74375328 -20897323 + AT_rich Low_complexity Low_complexity 1 29 0 5 1152 556 215 8 23 chr17 74375340 74375473 -20897178 - Lx6 LINE L1 -190 7270 7153 5 1152 276 108 0 0 chr17 74375476 74375513 -20897138 - Lx7 LINE L1 -244 7452 7416 5 1152 276 108 0 0 chr17 74375516 74375553 -20897098 - Lx7 LINE L1 -244 7452 7416 5 1152 276 108 0 0 chr17 74375556 74375593 -20897058 - Lx7 LINE L1 -244 7452 7416 5 1152 1017 230 75 5 chr17 74375596 74375810 -20896841 - Lx6 LINE L1 -271 7189 6961 5 1152 296 218 0 0 chr17 74376629 74376684 -20895967 + B4 SINE B4 14 68 -224 5 1152 284 73 14 56 chr17 74376698 74376770 -20895881 + (TTTTTG)n Simple_repeat Simple_repeat 2 70 0 5 1152 4080 87 76 8 chr17 74376887 74377481 -20895170 - Lx LINE L1 -1 6653 6020 5 1152 607 300 14 44 chr17 74377668 74377943 -20894708 + L1_Mur3 LINE L1 5364 5630 -250 5 1152 604 195 0 34 chr17 74377950 74378067 -20894584 + PB1D9 SINE Alu 1 113 -7 5 1152 1113 68 0 0 chr17 74378067 74378214 -20894437 + (TAGA)n Simple_repeat Simple_repeat 4 150 0 5 1152 235 335 41 59 chr17 74378479 74378698 -20893953 + L1M4 LINE L1 53 267 -6275 5 1152 406 314 135 45 chr17 74379014 74379347 -20893304 + L1MC4 LINE L1 6727 7089 -953 5 1152 715 186 6 22 chr17 74379347 74379528 -20893123 + (TA)n Simple_repeat Simple_repeat 2 179 0 5 1152 600 134 0 0 chr17 74379527 74379624 -20893027 + (TG)n Simple_repeat Simple_repeat 2 98 0 5 1152 229 318 100 8 chr17 74379934 74380064 -20892587 - L1MC4 LINE L1 -1174 6868 6727 5 1152 1271 250 86 21 chr17 74380776 74381103 -20891548 + MTE2b LTR MaLR 5 352 -27 5 1152 414 0 0 0 chr17 74381111 74381157 -20891494 + (TTA)n Simple_repeat Simple_repeat 3 48 0 5 1152 2111 99 19 0 chr17 74381176 74381489 -20891162 - ORR1A2 LTR MaLR -8 319 1 5 1152 351 0 0 0 chr17 74381494 74381533 -20891118 + (TATG)n Simple_repeat Simple_repeat 4 42 0 5 1152 823 192 25 0 chr17 74381533 74381694 -20890957 - B3 SINE B2 -49 167 3 5 1152 231 352 0 28 chr17 74382191 74382299 -20890352 + L2 LINE L2 1823 1927 -1492 5 1152 201 330 80 0 chr17 74382844 74382944 -20889707 + L2 LINE L2 2129 2236 -1183 5 1152 228 242 165 0 chr17 74383184 74383284 -20889367 + MLT1A0 LTR MaLR 217 374 -34 5 1152 408 190 0 41 chr17 74383446 74383567 -20889084 + C-rich Low_complexity Low_complexity 2 117 0 5 1152 282 214 29 10 chr17 74383814 74383918 -20888733 + CT-rich Low_complexity Low_complexity 4 109 0 5 1152 411 260 172 19 chr17 74384282 74384439 -20888212 + L1MDa LINE L1 817 997 -5636 5 1152 2186 180 8 17 chr17 74384453 74384500 -20888151 + MTC LTR MaLR 24 72 -349 5 1152 3024 31 0 0 chr17 74384500 74384852 -20887799 + L1Md_A LINE L1 6231 6582 0 5 1152 2186 180 8 17 chr17 74384852 74385206 -20887445 + MTC LTR MaLR 73 421 0 5 1152 786 274 0 25 chr17 74385206 74385406 -20887245 + B3 SINE B2 21 215 -1 5 1152 592 293 92 48 chr17 74385410 74385802 -20886849 + L1MA4 LINE L1 5473 5900 -400 5 1152 542 226 8 24 chr17 74385834 74385961 -20886690 + B3A SINE B2 28 152 -46 5 1152 288 0 0 0 chr17 74385962 74385994 -20886657 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 1152 226 271 192 8 chr17 74386174 74386304 -20886347 + L1MEc LINE L1 13 166 -6234 5 1152 895 289 123 12 chr17 74386312 74386645 -20886006 - MTE2b LTR MaLR -9 370 1 5 1152 781 329 137 21 chr17 74386646 74386770 -20885881 + L1MEc LINE L1 162 294 -6106 5 1152 1293 121 11 0 chr17 74386770 74386960 -20885691 - B2_Mm1t SINE B2 0 193 2 5 1152 781 329 137 21 chr17 74386960 74387398 -20885253 + L1MEc LINE L1 295 788 -5612 5 1152 451 285 35 0 chr17 74387455 74387599 -20885052 - B1F SINE Alu 0 149 1 6 1152 575 252 15 7 chr17 74387720 74387858 -20884793 + RSINE1 SINE B4 3 132 -33 6 1152 230 146 0 40 chr17 74387866 74387916 -20884735 + A-rich Low_complexity Low_complexity 3 50 0 6 1152 261 277 24 12 chr17 74387929 74388013 -20884638 + L1MEc LINE L1 926 1010 -5390 5 1152 665 288 88 9 chr17 74388084 74388301 -20884350 - MTD LTR MaLR -163 256 23 6 1152 309 51 0 0 chr17 74388301 74388340 -20884311 + (ATG)n Simple_repeat Simple_repeat 3 41 0 6 1152 594 41 0 0 chr17 74388487 74388560 -20884091 + (TC)n Simple_repeat Simple_repeat 1 73 0 6 1152 529 339 90 50 chr17 74388846 74389448 -20883203 - L1MD1 LINE L1 -298 5944 5319 6 1152 574 338 57 19 chr17 74389456 74389875 -20882776 + L1MEc LINE L1 5038 5472 -847 5 1152 207 284 45 0 chr17 74390458 74390525 -20882126 + MIRb SINE MIR 191 260 -8 6 1152 368 312 55 79 chr17 74391831 74392033 -20880618 + MER58A DNA MER1_type 2 198 -26 6 1152 431 188 8 127 chr17 74392830 74392964 -20879687 - PB1D9 SINE Alu -2 118 1 6 1152 183 336 28 46 chr17 74393373 74393482 -20879169 - L2a LINE L2 -19 3407 3301 6 1152 29 28 0 0 chr17 74393716 74393752 -20878899 + AT_rich Low_complexity Low_complexity 1 36 0 6 1152 206 338 37 43 chr17 74394522 74394683 -20877968 + MIR SINE MIR 84 243 -19 6 1152 21 0 0 0 chr17 74395000 74395021 -20877630 + AT_rich Low_complexity Low_complexity 1 21 0 6 1152 472 222 25 33 chr17 74395029 74395150 -20877501 + PB1D9 SINE Alu 1 120 0 6 1152 1468 59 37 11 chr17 74395200 74395389 -20877262 + B2_Mm2 SINE B2 1 194 -1 6 1152 193 295 51 0 chr17 74395997 74396075 -20876576 + MIRc SINE MIR 71 152 -116 6 1152 485 239 60 0 chr17 74399795 74399912 -20872739 - L1ME3A LINE L1 -160 6013 5890 6 1152 286 342 68 0 chr17 74400132 74400249 -20872402 - MER74C LTR ERVL -258 202 78 6 1152 694 288 143 49 chr17 74400422 74400729 -20871922 - MTEa LTR MaLR -37 342 7 6 1152 296 264 121 0 chr17 74400734 74400874 -20871777 - MTEa-int LTR MaLR -2 1578 1422 6 1152 437 242 0 0 chr17 74400918 74401009 -20871642 + B1_Mur1 SINE Alu 27 117 -32 6 1152 517 295 56 37 chr17 74401009 74401224 -20871427 + Lx8 LINE L1 6929 7147 -326 6 1152 5157 112 29 4 chr17 74401278 74402032 -20870619 + Lx2 LINE L1 5873 6645 -352 6 1152 1447 123 0 0 chr17 74402030 74402241 -20870410 + Lx2 LINE L1 6775 6985 -12 6 1152 2140 79 233 12 chr17 74402664 74403008 -20869643 + RLTR9B2 LTR ERVK 1 420 0 6 1152 675 264 0 0 chr17 74403019 74403163 -20869488 + B3A SINE B2 17 160 -38 6 1152 23 0 0 0 chr17 74403198 74403221 -20869430 + AT_rich Low_complexity Low_complexity 1 23 0 6 1152 180 77 0 0 chr17 74403480 74403506 -20869145 + (CAAAAA)n Simple_repeat Simple_repeat 5 30 0 6 1152 306 288 127 8 chr17 74403514 74403640 -20869011 - B1F SINE Alu -7 142 2 6 1152 4654 59 0 0 chr17 74403822 74404418 -20868233 - MusHAL1 LINE L1 -638 2074 1479 6 1152 2014 137 13 0 chr17 74404412 74404725 -20867926 - L1VL2 LINE L1 -5954 381 65 6 1152 688 307 41 26 chr17 74404780 74405051 -20867600 + ORR1D2 LTR MaLR 1 275 -95 6 1152 1246 226 138 29 chr17 74405122 74405541 -20867110 - RMER5 LTR ERV1 -46 488 24 6 1152 33 66 0 0 chr17 74405817 74405878 -20866773 + AT_rich Low_complexity Low_complexity 1 61 0 6 1152 427 317 43 55 chr17 74406121 74406378 -20866273 + RLTR12B LTR ERVK 25 278 -250 6 1152 1575 269 67 2 chr17 74406556 74406973 -20865678 - Lx8 LINE L1 -772 6701 6258 6 1152 479 262 143 98 chr17 74407187 74407432 -20865219 + MER82 DNA MER2_type 130 385 -268 6 1152 387 0 0 0 chr17 74407437 74407480 -20865171 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1152 698 289 28 33 chr17 74407493 74407704 -20864947 + B3 SINE B2 5 214 -2 6 1152 389 243 56 0 chr17 74407737 74407844 -20864807 + MER82 DNA MER2_type 441 553 -100 6 1152 377 307 22 0 chr17 74407902 74408039 -20864612 + MER115 DNA Tip100 549 688 -5 6 1152 21 36 0 0 chr17 74408896 74408924 -20863727 + AT_rich Low_complexity Low_complexity 1 28 0 6 1152 450 176 0 0 chr17 74409098 74409172 -20863479 + L1VL1 LINE L1 1 74 -6348 6 1152 31540 80 14 41 chr17 74409172 74412084 -20860567 + L1Md_F2 LINE L1 480 3415 -2468 6 1152 6631 72 56 2 chr17 74412084 74412966 -20859685 + RLTR13B3 LTR ERVK 1 929 0 6 1152 31540 70 5 54 chr17 74412966 74415355 -20857296 + L1Md_F2 LINE L1 3416 5586 -297 6 1152 7870 63 2 7 chr17 74415355 74416345 -20856306 + L1Md_F2 LINE L1 5587 6571 -11 6 1152 21 0 0 0 chr17 74416345 74416366 -20856285 + AT_rich Low_complexity Low_complexity 1 21 0 6 1152 2024 47 0 38 chr17 74416370 74416636 -20856015 + L1Md_F2 LINE L1 6324 6579 -3 6 1152 279 0 0 0 chr17 74417646 74417677 -20854974 + (TC)n Simple_repeat Simple_repeat 1 31 0 6 1152 522 0 0 0 chr17 74417677 74417734 -20854917 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 1152 326 258 10 41 chr17 74418109 74418206 -20854445 + RSINE1 SINE B4 44 137 -28 6 1152 684 286 32 136 chr17 74418260 74418511 -20854140 + B4 SINE B4 1 225 -67 6 1152 231 196 0 0 chr17 74418519 74418552 -20854099 + polypurine Low_complexity Low_complexity 1 33 0 6 1152 1389 61 0 0 chr17 74418552 74418732 -20853919 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 6 1152 231 196 0 0 chr17 74418732 74418749 -20853902 + polypurine Low_complexity Low_complexity 34 50 0 6 1152 241 320 0 0 chr17 74418794 74418869 -20853782 + (CA)n Simple_repeat Simple_repeat 1 75 0 6 1152 330 129 0 0 chr17 74418869 74418931 -20853720 + (GA)n Simple_repeat Simple_repeat 2 63 0 6 1152 1601 84 50 21 chr17 74418972 74419214 -20853437 + Lx2 LINE L1 6632 6880 -117 6 1152 1171 70 0 0 chr17 74419256 74419398 -20853253 + B1_Mus2 SINE Alu 1 142 -5 6 1152 334 134 0 29 chr17 74419398 74419444 -20853207 + polypurine Low_complexity Low_complexity 6 51 0 6 1152 1452 44 0 0 chr17 74419444 74419624 -20853027 + (GAA)n Simple_repeat Simple_repeat 1 180 0 6 1152 334 134 0 29 chr17 74419624 74419646 -20853005 + polypurine Low_complexity Low_complexity 52 72 0 6 1152 816 50 0 0 chr17 74419715 74419814 -20852837 - L1Md_F2 LINE L1 -267 6315 6217 6 1152 1573 108 4 60 chr17 74419814 74420080 -20852571 + L1Md_F2 LINE L1 6332 6582 0 6 1152 471 287 8 0 chr17 74420080 74420103 -20852548 - Lx2 LINE L1 -440 6557 6534 6 1152 1780 270 59 18 chr17 74420253 74420825 -20851826 + Lx8 LINE L1 6817 7412 -61 6 1152 370 261 219 22 chr17 74421187 74421324 -20851327 + RSINE1 SINE B4 2 165 0 6 1152 692 12 12 0 chr17 74421358 74421443 -20851208 + (GAAA)n Simple_repeat Simple_repeat 1 86 0 6 1152 793 44 18 9 chr17 74421443 74421556 -20851095 + (GGGAA)n Simple_repeat Simple_repeat 5 119 0 6 1152 1246 180 150 3 chr17 74422101 74422385 -20850266 - RMER4B LTR ERVK 0 585 238 6 1152 7028 59 39 2 chr17 74422385 74423281 -20849370 + RLTR13B3 LTR ERVK 1 929 0 6 1152 1220 201 89 144 chr17 74423281 74423489 -20849162 - RMER4B LTR ERVK -229 237 2 6 1152 260 293 73 8 chr17 74424535 74424659 -20847992 - L1MC4a LINE L1 -1076 6806 6675 6 1152 21 0 0 0 chr17 74424770 74424791 -20847860 + AT_rich Low_complexity Low_complexity 1 21 0 6 1152 180 0 0 0 chr17 74424996 74425016 -20847635 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 1152 1366 165 0 4 chr17 74425043 74425268 -20847383 + URR1B DNA MER1_type 2 225 0 6 1152 764 295 14 22 chr17 74425268 74425490 -20847161 - B4A SINE B4 -72 220 1 6 1152 275 361 37 5 chr17 74425555 74425769 -20846882 - L1MC4a LINE L1 -2037 5845 5625 6 1152 745 128 133 7 chr17 74425820 74425970 -20846681 + Lx LINE L1 6486 6654 0 6 1152 519 292 48 24 chr17 74426031 74426196 -20846455 - B3A SINE B2 -28 170 2 6 1152 289 253 13 13 chr17 74426989 74427065 -20845586 - L1MC4a LINE L1 -2365 5517 5442 6 1152 405 0 0 0 chr17 74427187 74427232 -20845419 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1152 1005 222 67 33 chr17 74427561 74427831 -20844820 - ORR1C1 LTR MaLR -99 279 1 6 1152 762 255 81 67 chr17 74428430 74428728 -20843923 + MLT2D LTR ERVL 8 309 -88 6 1152 267 257 0 28 chr17 74428728 74428800 -20843851 + CT-rich Low_complexity Low_complexity 3 72 0 6 1152 287 298 10 28 chr17 74429195 74429363 -20843288 + L1MD LINE L1 2380 2544 -3602 6 1152 307 195 146 22 chr17 74429708 74429797 -20842854 + PB1D9 SINE Alu 3 102 -18 6 1152 234 0 0 0 chr17 74430100 74430126 -20842525 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 1152 1169 61 0 13 chr17 74430226 74430376 -20842275 + B1_Mus1 SINE Alu 1 148 0 6 1152 988 209 75 0 chr17 74430702 74430903 -20841748 + B3 SINE B2 1 216 0 6 1152 204 86 57 0 chr17 74430903 74430938 -20841713 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 6 1152 459 266 29 97 chr17 74431290 74431465 -20841186 + RSINE1 SINE B4 3 165 0 6 1152 536 208 23 53 chr17 74431729 74431861 -20840790 + ORR1D2 LTR MaLR 3 130 -240 6 1152 427 232 80 43 chr17 74431836 74431998 -20840653 - ORR1D2 LTR MaLR -85 285 118 6 1152 988 173 42 0 chr17 74432258 74432449 -20840202 - URR1A DNA MER1_type -11 215 17 6 1152 1328 110 16 0 chr17 74432745 74432936 -20839715 - B2_Mm2 SINE B2 -1 194 1 6 1152 983 121 14 0 chr17 74433063 74433203 -20839448 + B1_Mur4 SINE Alu 2 143 -7 6 1152 207 0 0 0 chr17 74433206 74433229 -20839422 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 6 1152 532 256 59 12 chr17 74433239 74433409 -20839242 + ERVL-int LTR ERVL 5573 5750 -7 6 1152 420 257 148 11 chr17 74433276 74433465 -20839186 + Ricksha_c DNA MuDR 184 398 -1650 6 1152 268 200 12 12 chr17 74433500 74433581 -20839070 + (CA)n Simple_repeat Simple_repeat 2 82 0 6 1152 1324 191 22 190 chr17 74433807 74434025 -20838626 + ORR1D1 LTR MaLR 3 225 -149 6 1152 1345 6 23 6 chr17 74434025 74434200 -20838451 + (CCTG)n Simple_repeat Simple_repeat 2 179 0 6 1152 1324 191 22 190 chr17 74434200 74434215 -20838436 + ORR1D1 LTR MaLR 226 226 -148 6 1152 1029 24 53 0 chr17 74434215 74434384 -20838267 + (CCTG)n Simple_repeat Simple_repeat 2 179 0 6 1152 1324 191 22 190 chr17 74434384 74434399 -20838252 + ORR1D1 LTR MaLR 226 226 -148 6 1152 840 66 54 0 chr17 74434399 74434566 -20838085 + (CCTG)n Simple_repeat Simple_repeat 4 179 0 6 1152 1324 191 22 190 chr17 74434566 74434591 -20838060 + ORR1D1 LTR MaLR 226 238 -136 6 1152 1202 17 35 6 chr17 74434591 74434765 -20837886 + (CCTG)n Simple_repeat Simple_repeat 1 179 0 7 1152 1324 191 22 190 chr17 74434765 74434779 -20837872 + ORR1D1 LTR MaLR 239 247 -127 6 1152 1159 24 80 0 chr17 74434779 74434947 -20837704 + (CCTG)n Simple_repeat Simple_repeat 1 183 -1019 7 1152 1159 24 80 0 chr17 74434957 74435286 -20837365 + (CCTG)n Simple_repeat Simple_repeat 184 543 -659 7 1152 1159 24 80 0 chr17 74435293 74435892 -20836759 + (CCTG)n Simple_repeat Simple_repeat 544 1202 0 7 1152 1324 191 22 190 chr17 74435892 74436022 -20836629 + ORR1D1 LTR MaLR 248 371 -3 7 1152 5187 60 0 0 chr17 74436479 74437111 -20835540 + L1_Mus1 LINE L1 5936 6567 0 7 1152 1051 253 39 152 chr17 74438923 74439023 -20833628 - RLTR16 LTR ERVK -4 501 402 7 1152 1095 102 0 7 chr17 74439023 74439171 -20833480 + B1_Mm SINE Alu 1 147 0 7 1152 1051 253 39 152 chr17 74439171 74439635 -20833016 - RLTR16 LTR ERVK -104 401 1 7 1152 2273 110 6 12 chr17 74439914 74440245 -20832406 - ORR1A4 LTR MaLR 0 329 1 7 1152 747 191 141 16 chr17 74440554 74440745 -20831906 + B3 SINE B2 1 215 -1 7 1152 1271 178 156 24 chr17 74440782 74441110 -20831541 - ORR1D1 LTR MaLR -2 372 2 7 1152 25830 37 2 1 chr17 74441501 74445703 -20826948 + L1Md_F2 LINE L1 1385 5586 -297 7 1152 8682 44 1 2 chr17 74445703 74446699 -20825952 + L1Md_F2 LINE L1 5587 6581 -1 7 1152 1048 270 22 15 chr17 74447560 74447831 -20824820 + B4A SINE B4 4 276 -16 7 1152 492 220 5 38 chr17 74447897 74448081 -20824570 + GA-rich Low_complexity Low_complexity 1 178 0 7 1152 662 90 24 32 chr17 74448038 74448164 -20824487 + (GGAAA)n Simple_repeat Simple_repeat 1 125 0 7 1152 1234 68 0 26 chr17 74448225 74448237 -20824414 - B1_Mus1 SINE Alu 0 148 140 7 1152 315 0 0 0 chr17 74448237 74448272 -20824379 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 1152 1234 68 0 26 chr17 74448272 74448411 -20824240 - B1_Mus1 SINE Alu -9 139 1 7 1152 548 233 466 17 chr17 74448688 74448863 -20823788 - L1M2 LINE L1 -1906 4234 3984 7 17 2966 103 18 3 chr17 74448863 74449251 -20823400 + ORR1B1 LTR MaLR 1 394 0 7 1153 548 250 16 31 chr17 74449251 74449359 -20823292 - L1M2 LINE L1 -2157 3983 3875 7 1153 517 245 135 103 chr17 74449359 74449784 -20822867 + RMER15 LTR ERVL 1 572 -3 7 1153 713 262 146 4 chr17 74449785 74450065 -20822586 - L1_Mur3 LINE L1 -2034 3846 3527 7 1153 306 0 0 0 chr17 74450189 74450223 -20822428 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 1153 697 349 64 4 chr17 74450225 74450475 -20822176 - B4A SINE B4 -23 269 5 7 1153 1189 279 64 30 chr17 74450477 74450991 -20821660 - L1M2 LINE L1 -2572 3571 3028 7 1153 270 0 0 0 chr17 74450991 74451021 -20821630 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 7 1153 1189 279 64 30 chr17 74451021 74451034 -20821617 - L1M2 LINE L1 -3116 3027 3020 7 1153 1410 199 182 6 chr17 74451034 74451352 -20821299 + ORR1D1 LTR MaLR 1 374 0 7 1153 1189 279 64 30 chr17 74451352 74451452 -20821199 - L1M2 LINE L1 -3124 3019 2922 7 1153 611 203 114 0 chr17 74451592 74451715 -20820936 + MTD LTR MaLR 12 148 -271 7 1153 243 281 0 0 chr17 74451710 74451767 -20820884 - B4A SINE B4 -233 59 3 7 1153 393 22 0 0 chr17 74452999 74453045 -20819606 + (TCTCCC)n Simple_repeat Simple_repeat 3 48 0 7 1153 2530 157 102 20 chr17 74453722 74454210 -20818441 + RLTR12B LTR ERVK 1 528 0 7 1153 719 165 8 23 chr17 74454567 74454697 -20817954 + Lx9 LINE L1 7349 7476 -168 7 1153 312 27 0 0 chr17 74454698 74454735 -20817916 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1153 1456 75 16 16 chr17 74454802 74454992 -20817659 - B2_Mm2 SINE B2 -4 191 2 7 1153 1342 149 82 0 chr17 74454997 74455205 -20817446 - URR1A DNA MER1_type -1 225 1 7 1153 253 366 98 0 chr17 74455361 74455473 -20817178 + MIR SINE MIR 3 125 -137 7 1153 209 176 0 0 chr17 74455508 74455542 -20817109 + (TAGG)n Simple_repeat Simple_repeat 2 35 0 7 1153 1148 28 16 43 chr17 74455546 74455731 -20816920 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 7 1153 198 0 0 0 chr17 74455741 74455763 -20816888 + (GA)n Simple_repeat Simple_repeat 1 22 0 7 1153 187 330 40 40 chr17 74457018 74457119 -20815532 + MIRm SINE MIR 42 142 -134 7 1153 293 258 0 0 chr17 74457861 74457923 -20814728 - RMER15 LTR ERVL -109 466 405 7 1153 1190 318 28 0 chr17 74457925 74458283 -20814368 - Lx8 LINE L1 -207 7266 6899 7 1153 607 245 13 19 chr17 74458404 74458558 -20814093 - MLT1D LTR MaLR 0 505 353 7 1153 393 325 16 31 chr17 74458694 74458821 -20813830 + B1F2 SINE Alu 18 143 -5 7 1153 1242 47 6 12 chr17 74459023 74459195 -20813456 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 7 1153 36164 48 0 3 chr17 74459308 74464714 -20807937 + L1Md_T LINE L1 105 5589 -297 7 1153 9084 29 0 0 chr17 74464714 74465746 -20806905 + L1Md_T LINE L1 5590 6585 0 7 1153 1048 228 154 4 chr17 74465847 74466099 -20806552 - MTD LTR MaLR -13 406 114 7 1153 575 167 111 0 chr17 74466099 74466207 -20806444 + B1_Mus2 SINE Alu 1 120 -27 7 1153 3156 171 51 79 chr17 74466894 74467604 -20805047 - RMER6C LTR ERVK 0 690 1 7 1153 413 260 48 22 chr17 74467705 74467884 -20804767 + L1MA5 LINE L1 6111 6296 -4 7 1153 339 287 55 99 chr17 74468658 74468859 -20803792 - B3A SINE B2 -6 192 1 7 1153 1549 134 100 68 chr17 74469589 74469900 -20802751 - ORR1A4 LTR MaLR -8 321 1 7 1153 1349 240 118 3 chr17 74470735 74471065 -20801586 + ORR1D2 LTR MaLR 1 368 -2 7 1153 1860 153 76 9 chr17 74471100 74471430 -20801221 - ORR1B2 LTR MaLR -15 352 1 7 1153 1281 67 0 0 chr17 74472042 74472191 -20800460 - B1_Mur4 SINE Alu -1 149 1 7 1153 283 307 70 42 chr17 74472756 74472957 -20799694 - L1MA7 LINE L1 -124 6167 5959 7 1153 238 373 18 0 chr17 74472957 74473067 -20799584 + (CA)n Simple_repeat Simple_repeat 1 112 0 7 1153 378 223 71 78 chr17 74473171 74473312 -20799339 + B2_Mm2 SINE B2 1 140 -55 7 1153 2014 276 39 24 chr17 74473314 74473904 -20798747 + Lx8 LINE L1 6316 6914 -559 7 1153 33218 88 16 2 chr17 74474766 74480830 -20791821 + L1_Mus1 LINE L1 409 6567 0 7 1153 432 0 0 0 chr17 74481540 74481588 -20791063 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 1153 835 275 54 25 chr17 74481671 74481951 -20790700 + B4A SINE B4 4 291 -1 7 1153 297 249 36 95 chr17 74482017 74482215 -20790436 - MIRc SINE MIR -68 200 22 7 1153 717 250 0 0 chr17 74482673 74482817 -20789834 + B1_Mur4 SINE Alu 7 150 0 7 1153 191 299 195 0 chr17 74482853 74482940 -20789711 + MIRb SINE MIR 56 159 -109 7 1153 435 38 0 0 chr17 74482986 74483039 -20789612 + (CATA)n Simple_repeat Simple_repeat 4 56 0 7 1153 2647 147 29 12 chr17 74483039 74483453 -20789198 - MTC LTR MaLR 0 421 1 7 1153 254 182 0 15 chr17 74483453 74483520 -20789131 + (CAGA)n Simple_repeat Simple_repeat 1 66 0 7 1153 928 45 7 15 chr17 74483562 74483697 -20788954 + (TAGA)n Simple_repeat Simple_repeat 4 137 0 7 1153 21 0 0 0 chr17 74484096 74484117 -20788534 + AT_rich Low_complexity Low_complexity 1 21 0 7 1153 375 221 33 138 chr17 74484119 74484271 -20788380 - Lx8 LINE L1 -1195 6278 6143 7 1153 351 0 0 0 chr17 74484342 74484381 -20788270 + (A)n Simple_repeat Simple_repeat 1 39 0 7 1153 1117 178 23 37 chr17 74484406 74484622 -20788029 + B3 SINE B2 4 216 0 7 1153 539 294 82 46 chr17 74485123 74485451 -20787200 - L1M5 LINE L1 -1450 4696 4357 7 1153 1098 139 98 19 chr17 74485557 74485762 -20786889 - URR1A DNA MER1_type 0 226 6 7 1153 2823 67 10 163 chr17 74485762 74486099 -20786552 + BGLII_Mus LTR ERVK 1 288 -134 7 1153 1337 27 0 0 chr17 74486099 74486246 -20786405 + B1_Mus1 SINE Alu 2 148 0 7 1153 2823 67 10 163 chr17 74486246 74486406 -20786245 + BGLII_Mus LTR ERVK 289 422 0 7 1153 356 0 0 40 chr17 74486493 74486543 -20786108 + B1_Mus2 SINE Alu 98 145 -2 7 1153 468 51 0 0 chr17 74486544 74486603 -20786048 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 7 1153 286 351 0 9 chr17 74486770 74486885 -20785766 - MER89 LTR ERV1 0 559 446 7 1153 342 245 75 0 chr17 74487105 74487199 -20785452 - MER89 LTR ERV1 -457 102 2 7 1153 5299 126 27 71 chr17 74487429 74488369 -20784282 + RLTR13D6 LTR ERVK 1 898 -4 7 1153 351 322 116 92 chr17 74488396 74488567 -20784084 - B4 SINE B4 -1 291 115 7 1153 342 45 0 0 chr17 74488567 74488611 -20784040 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 1153 351 322 116 92 chr17 74488611 74488723 -20783928 - B4 SINE B4 -178 114 1 7 1153 650 243 117 34 chr17 74489482 74489661 -20782990 - B3A SINE B2 -3 195 2 7 1153 771 178 82 0 chr17 74489849 74489964 -20782687 + B1_Mur3 SINE Alu 3 117 -32 7 1153 471 35 0 0 chr17 74489964 74490021 -20782630 + (CA)n Simple_repeat Simple_repeat 2 58 0 7 1153 771 178 82 0 chr17 74490021 74490040 -20782611 + B1_Mur3 SINE Alu 118 147 -2 7 1153 1746 31 0 0 chr17 74490160 74490351 -20782300 + B2_Mm1t SINE B2 1 191 -2 7 1153 34 24 0 0 chr17 74490684 74490725 -20781926 + AT_rich Low_complexity Low_complexity 1 41 0 7 1153 1114 151 48 105 chr17 74490790 74491019 -20781632 + B3 SINE B2 1 216 0 7 1153 948 159 7 7 chr17 74491047 74491193 -20781458 + B1_Mur2 SINE Alu 4 149 0 7 1153 2446 130 32 27 chr17 74491214 74491625 -20781026 - MTC LTR MaLR -8 413 1 7 1153 363 202 0 0 chr17 74491819 74491898 -20780753 + (TA)n Simple_repeat Simple_repeat 2 80 0 7 1153 7179 112 18 7 chr17 74491943 74492988 -20779663 - Lx LINE L1 -5 6649 5593 7 1153 16268 157 19 35 chr17 74492984 74493425 -20779226 - L1VL2 LINE L1 -1669 4217 3853 7 1153 1262 56 0 0 chr17 74493425 74493568 -20779083 - B1_Mus2 SINE Alu -4 143 1 7 1153 16293 99 24 17 chr17 74493568 74494782 -20777869 - L1VL2 LINE L1 -2034 3852 2645 7 1153 468 0 0 0 chr17 74494782 74494834 -20777817 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 7 1153 16293 86 25 12 chr17 74494834 74494856 -20777795 - L1VL2 LINE L1 -1270 2644 2623 7 1153 225 0 0 0 chr17 74494856 74494881 -20777770 + (TA)n Simple_repeat Simple_repeat 2 26 0 7 1153 16293 88 25 12 chr17 74494881 74496978 -20775673 - L1VL2 LINE L1 -1292 2622 478 7 1153 265 310 0 45 chr17 74497066 74497154 -20775497 - BC1_Mm scRNA scRNA -68 84 1 7 1153 649 239 0 32 chr17 74498156 74498170 -20774481 + ID_B1 SINE B4 74 221 0 7 1153 953 129 14 0 chr17 74498170 74498309 -20774342 + B1_Mus2 SINE Alu 6 146 -1 7 1153 1397 138 4 30 chr17 74498688 74498919 -20773732 + RMER20A LTR ERVK 3 227 -289 7 1153 2852 168 30 54 chr17 74498927 74499304 -20773347 + L1VL4 LINE L1 394 766 -5536 7 1153 1422 63 0 11 chr17 74499304 74499459 -20773192 + B2_Mm1a SINE B2 2 155 -38 7 1153 279 0 0 0 chr17 74499459 74499490 -20773161 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 8 1153 1422 63 0 11 chr17 74499490 74499510 -20773141 + B2_Mm1a SINE B2 156 175 -18 7 1153 2852 112 5 18 chr17 74499510 74500000 -20772651 + L1VL4 LINE L1 767 1246 -2313 7 1153 14797 144 19 177 chr17 74500000 74504346 -20768305 + L1_Mur1 LINE L1 1602 5260 -626 1 1153 223 152 33 17 chr17 74504347 74504407 -20768244 + GA-rich Low_complexity Low_complexity 4 64 0 2 1153 780 293 52 8 chr17 74504452 74504817 -20767834 + L1MD3 LINE L1 7601 7981 -14 3 1153 482 252 131 0 chr17 74504834 74504941 -20767710 - B1F1 SINE Alu -8 141 21 4 1153 875 146 35 7 chr17 74505054 74505199 -20767452 - B1_Mur3 SINE Alu 0 149 1 5 1153 228 35 0 0 chr17 74505199 74505228 -20767423 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 1153 225 0 0 0 chr17 74505261 74505286 -20767365 + (TGG)n Simple_repeat Simple_repeat 1 25 0 7 1153 593 257 65 77 chr17 74505329 74505681 -20766970 + L1M2 LINE L1 5140 5488 -803 8 1153 767 234 28 28 chr17 74505683 74505863 -20766788 + B3A SINE B2 1 180 -18 9 1153 1063 31 0 0 chr17 74505907 74506037 -20766614 + B1_Mm SINE Alu 18 147 0 1 1153 205 86 29 0 chr17 74506037 74506072 -20766579 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 1 1153 413 195 84 8 chr17 74506094 74506213 -20766438 + L1M2 LINE L1 5477 5604 -696 8 1153 258 262 33 0 chr17 74506216 74506277 -20766374 + PB1D10 SINE Alu 1 63 -54 1 1153 1021 206 99 20 chr17 74506361 74506614 -20766037 - B4A SINE B4 -19 273 1 1 1153 1046 209 24 0 chr17 74506881 74507091 -20765560 + B3 SINE B2 2 216 0 1 1153 328 286 88 106 chr17 74507114 74507255 -20765396 - MLT1J-int LTR MaLR -958 429 289 1 1153 406 284 28 0 chr17 74507255 74507364 -20765287 - PB1D9 SINE Alu -8 112 1 1 1153 328 286 88 106 chr17 74507364 74507496 -20765155 - MLT1J-int LTR MaLR -1099 288 161 1 1153 1111 191 9 0 chr17 74507562 74507772 -20764879 - B3 SINE B2 -4 212 1 1 1153 207 0 0 0 chr17 74507941 74507964 -20764687 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1153 870 252 56 36 chr17 74508125 74508462 -20764189 + RLTR15 LTR ERVK 1 344 -15 1 1153 264 254 31 40 chr17 74508523 74508693 -20763958 + Lx4B LINE L1 6826 7057 -1 2 1153 567 0 0 0 chr17 74508710 74508773 -20763878 + (GA)n Simple_repeat Simple_repeat 1 63 0 2 1153 1154 82 6 19 chr17 74509631 74509793 -20762858 + B2_Mm1t SINE B2 1 160 -33 2 1153 360 0 0 0 chr17 74509793 74509833 -20762818 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 2 1153 3278 251 74 39 chr17 74509903 74511095 -20761556 + MYSERV-int LTR ERVK 3777 5010 -1540 2 1153 444 291 26 51 chr17 74511191 74511347 -20761304 + RMER4A LTR ERVK 256 407 -59 2 1153 23 0 0 0 chr17 74511366 74511389 -20761262 + AT_rich Low_complexity Low_complexity 1 23 0 2 1153 646 79 0 0 chr17 74511400 74511489 -20761162 - B1_Mus2 SINE Alu -57 90 2 2 1153 352 274 0 105 chr17 74511489 74511521 -20761130 - MT2B LTR ERVL -443 158 139 2 1153 4752 150 49 53 chr17 74511532 74512533 -20760118 + MYSERV6-int LTR ERVK 7961 8957 -2 2 1153 617 301 59 59 chr17 74512535 74512891 -20759760 + RLTR15 LTR ERVK 1 356 -3 2 1153 409 242 40 0 chr17 74513196 74513295 -20759356 + PB1D7 SINE Alu 5 107 -13 3 1153 201 74 0 0 chr17 74513298 74513325 -20759326 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1153 491 322 59 37 chr17 74514183 74514370 -20758281 + B4A SINE B4 41 231 -61 3 1153 390 256 0 0 chr17 74514381 74514471 -20758180 + B3A SINE B2 2 91 -107 3 1153 229 310 43 8 chr17 74514471 74514498 -20758153 + B4A SINE B4 2 122 -170 3 1153 232 268 0 101 chr17 74514746 74514795 -20757856 + B3A SINE B2 117 164 -34 3 1153 228 35 0 0 chr17 74514795 74514824 -20757827 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1153 232 268 0 101 chr17 74514824 74514853 -20757798 + B3A SINE B2 165 187 -11 3 1153 470 220 0 57 chr17 74514913 74514959 -20757692 + B4A SINE B4 46 85 -207 3 1153 476 147 0 0 chr17 74514959 74515027 -20757624 + B1_Mus2 SINE Alu 1 68 -79 3 1153 264 134 75 0 chr17 74515034 74515101 -20757550 + GA-rich Low_complexity Low_complexity 5 76 0 3 1153 834 71 0 23 chr17 74515109 74515239 -20757412 + (GGAAA)n Simple_repeat Simple_repeat 1 127 0 3 1153 189 325 171 26 chr17 74516437 74516554 -20756097 + MIRb SINE MIR 87 220 -48 4 1153 787 151 14 35 chr17 74516734 74516878 -20755773 + B1_Mus2 SINE Alu 7 147 0 4 1153 1425 255 44 38 chr17 74516958 74517460 -20755191 + RLTR16 LTR ERVK 1 505 0 4 1153 566 245 76 30 chr17 74517683 74517919 -20754732 - Lx5 LINE L1 0 7050 6804 4 1153 12080 85 25 25 chr17 74517919 74519819 -20752832 + L1VL4 LINE L1 584 2526 -1033 4 1153 1119 88 0 0 chr17 74519819 74519966 -20752685 + B1_Mm SINE Alu 1 147 0 4 1153 12080 84 28 26 chr17 74519966 74520316 -20752335 + L1VL4 LINE L1 2527 2841 -718 4 1153 1125 180 64 47 chr17 74520325 74520747 -20751904 + L1_Mus4 LINE L1 6251 6648 -6 4 1153 276 319 171 5 chr17 74521010 74521184 -20751467 - MIR SINE MIR -17 251 46 4 1153 1338 82 5 40 chr17 74571697 74571899 -20700752 + B2_Mm2 SINE B2 1 195 0 4 1153 264 260 108 20 chr17 74571952 74572054 -20700597 - MIR SINE MIR -24 238 128 4 1153 256 345 0 23 chr17 74572089 74572175 -20700476 + RSINE1 SINE B4 82 165 0 5 1153 656 326 99 11 chr17 74572204 74572567 -20700084 + Lx7 LINE L1 6941 7335 -361 5 1153 789 201 74 0 chr17 74572651 74572800 -20699851 + B3 SINE B2 51 210 -6 5 1153 287 155 48 0 chr17 74572811 74572895 -20699756 + (TA)n Simple_repeat Simple_repeat 1 88 0 5 1153 1221 91 22 28 chr17 74573534 74573715 -20698936 - B2_Mm2 SINE B2 -14 181 2 5 1153 244 234 199 81 chr17 74573766 74573880 -20698771 - B1_Mus2 SINE Alu -30 119 1 5 1153 740 284 79 0 chr17 74574550 74574804 -20697847 + B4A SINE B4 1 274 -18 5 1153 726 271 44 75 chr17 74574839 74575134 -20697517 - B4A SINE B4 -6 286 1 5 1153 184 232 0 104 chr17 74576860 74576908 -20695743 + MIRb SINE MIR 27 69 -199 5 1153 774 107 69 35 chr17 74577367 74577512 -20695139 + URR1A DNA MER1_type 77 226 0 5 1153 354 244 123 39 chr17 74577512 74577545 -20695106 - CYRA11_Mm Unknown Y-chromosome -295 321 129 6 1153 666 273 9 98 chr17 74577748 74577963 -20694688 + B3A SINE B2 8 203 -13 6 1153 208 146 35 35 chr17 74577964 74578021 -20694630 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 1153 195 182 159 0 chr17 74578161 74578205 -20694446 - MER5A DNA MER1_type -3 186 136 6 1153 827 132 0 7 chr17 74578456 74578590 -20694061 + B1_Mur4 SINE Alu 17 144 -6 6 1153 221 259 17 0 chr17 74578591 74578649 -20694002 + GA-rich Low_complexity Low_complexity 1 59 0 6 1153 22 0 0 0 chr17 74578881 74578903 -20693748 + AT_rich Low_complexity Low_complexity 1 22 0 6 1153 195 182 159 0 chr17 74579328 74579372 -20693279 - MER5A DNA MER1_type -3 186 136 6 1153 827 132 0 7 chr17 74579623 74579757 -20692894 + B1_Mur4 SINE Alu 17 144 -6 6 1153 221 259 17 0 chr17 74579758 74579816 -20692835 + GA-rich Low_complexity Low_complexity 1 59 0 6 1154 22 0 0 0 chr17 74580048 74580070 -20692581 + AT_rich Low_complexity Low_complexity 1 22 0 6 1154 261 0 0 0 chr17 74580252 74580281 -20692370 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 7 1154 921 143 0 0 chr17 74580870 74581010 -20691641 - B1_Mur4 SINE Alu -9 141 2 7 1154 1685 21 0 0 chr17 74581579 74581770 -20690881 - B2_Mm1t SINE B2 -1 192 2 7 1154 628 113 0 29 chr17 74581949 74582086 -20690565 + (TAAA)n Simple_repeat Simple_repeat 4 136 0 7 1154 477 182 264 9 chr17 74582544 74582692 -20689959 + ORR1B2 LTR MaLR 138 359 -8 7 1154 313 286 55 0 chr17 74582851 74582942 -20689709 - PB1D10 SINE Alu -12 105 10 7 1154 333 275 103 20 chr17 74583328 74583550 -20689101 - L1MC LINE L1 -3257 2889 2648 7 1154 390 317 63 7 chr17 74584066 74584209 -20688442 - RSINE1 SINE B4 -13 152 2 7 1154 946 246 14 5 chr17 74584335 74584543 -20688108 - B3 SINE B2 -6 210 1 7 1154 604 267 175 18 chr17 74585009 74585238 -20687413 + B4 SINE B4 24 288 -4 7 1154 433 251 153 58 chr17 74585319 74585632 -20687019 + L1MC2 LINE L1 5642 5984 -360 8 1154 735 119 37 0 chr17 74586265 74586374 -20686277 + B1_Mur3 SINE Alu 37 149 0 8 1154 279 0 0 0 chr17 74586478 74586509 -20686142 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 1154 678 274 113 49 chr17 74588269 74588341 -20684310 + L1MA4 LINE L1 4285 4372 -1508 8 1154 232 27 54 0 chr17 74588341 74588378 -20684273 + (CAAAA)n Simple_repeat Simple_repeat 4 42 0 8 1154 678 278 154 46 chr17 74588378 74589160 -20683491 + L1MA4 LINE L1 4373 5325 -818 8 1154 416 306 53 118 chr17 74589163 74589244 -20683407 + B4 SINE B4 2 81 -211 8 1154 186 43 0 0 chr17 74589244 74589267 -20683384 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 8 1154 416 306 53 118 chr17 74589267 74589489 -20683162 + B4 SINE B4 82 285 -7 8 1154 524 158 0 0 chr17 74589531 74589613 -20683038 + PB1D9 SINE Alu 1 82 -38 8 1154 265 303 20 20 chr17 74589620 74589636 -20683015 + polypurine Low_complexity Low_complexity 2 17 0 8 1154 1612 42 0 0 chr17 74589636 74589829 -20682822 + B2_Mm1a SINE B2 1 193 0 8 1154 265 303 20 20 chr17 74589829 74589913 -20682738 + GA-rich Low_complexity Low_complexity 18 102 0 9 1154 239 322 42 42 chr17 74590081 74590201 -20682450 + B1_Mur1 SINE Alu 28 147 -2 9 1154 435 266 126 30 chr17 74590309 74590546 -20682105 + L1MA4 LINE L1 5568 5826 -474 8 1154 2104 184 107 14 chr17 74590549 74590990 -20681661 + Lx5 LINE L1 6534 7015 -35 9 1154 306 287 85 65 chr17 74591006 74591159 -20681492 + HAL1-3A_ME LINE L1 2284 2439 -419 9 1154 456 19 0 0 chr17 74591384 74591437 -20681214 + (CA)n Simple_repeat Simple_repeat 1 53 0 9 1154 369 0 0 0 chr17 74592144 74592185 -20680466 + (CAGA)n Simple_repeat Simple_repeat 3 43 0 9 1154 606 269 95 15 chr17 74592583 74592783 -20679868 - B3 SINE B2 0 216 1 9 1154 372 373 99 20 chr17 74593167 74593286 -20679365 - LTR16C LTR ERVL -21 468 334 9 1154 277 41 82 0 chr17 74593286 74593335 -20679316 + (CAGA)n Simple_repeat Simple_repeat 2 54 0 9 1154 372 373 99 20 chr17 74593335 74593508 -20679143 - LTR16C LTR ERVL -156 333 153 9 1154 1030 128 194 0 chr17 74593675 74593855 -20678796 + B3 SINE B2 2 216 0 9 1154 435 295 16 8 chr17 74596053 74596176 -20676475 - B1_Mur1 SINE Alu -5 144 21 1 1154 186 71 0 0 chr17 74596181 74596209 -20676442 + (CAAAAA)n Simple_repeat Simple_repeat 4 31 0 1 1154 201 300 152 15 chr17 74596222 74596354 -20676297 - L3 LINE CR1 -274 4215 4066 1 1154 231 255 0 19 chr17 74596856 74596908 -20675743 + PB1D10 SINE Alu 4 54 -63 1 1154 552 291 59 15 chr17 74597228 74597430 -20675221 + MER58A DNA MER1_type 12 222 -2 1 1154 501 198 42 67 chr17 74598244 74598363 -20674288 + B1F1 SINE Alu 1 116 -1 1 1154 250 288 140 31 chr17 74598536 74598765 -20673886 + L1ME4a LINE L1 5536 5789 -335 1 1154 222 37 0 0 chr17 74598873 74598900 -20673751 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1154 332 224 71 43 chr17 74598901 74599041 -20673610 + L1ME4a LINE L1 5963 6106 -18 1 1154 24 77 0 0 chr17 74599888 74599940 -20672711 + AT_rich Low_complexity Low_complexity 1 52 0 1 1154 302 133 200 0 chr17 74600906 74600966 -20671685 - B1_Mur4 SINE Alu -60 90 19 1 1154 1182 38 14 14 chr17 74601112 74601328 -20671323 + (CA)n Simple_repeat Simple_repeat 1 216 0 1 1154 38 22 0 0 chr17 74601724 74601769 -20670882 + AT_rich Low_complexity Low_complexity 1 45 0 1 1154 29 28 0 0 chr17 74602344 74602380 -20670271 + AT_rich Low_complexity Low_complexity 1 36 0 1 1154 574 287 14 0 chr17 74602404 74602547 -20670104 - RSINE1 SINE B4 -18 147 3 1 1154 1205 48 0 0 chr17 74603041 74603188 -20669463 - B1_Mm SINE Alu 0 147 1 1 1154 971 76 0 0 chr17 74605772 74605903 -20666748 - B1_Mus1 SINE Alu 0 148 18 1 1154 3047 43 13 10 chr17 74606464 74606859 -20665792 + MTA_Mm LTR MaLR 1 396 0 1 1154 24 0 0 0 chr17 74607496 74607520 -20665131 + AT_rich Low_complexity Low_complexity 1 24 0 1 1154 419 135 133 18 chr17 74607529 74607642 -20665009 + Lx4B LINE L1 6933 7058 0 1 1154 673 319 103 52 chr17 74607787 74607840 -20664811 + MER20B DNA MER1_type 146 199 -584 1 1154 1646 36 0 0 chr17 74607840 74608033 -20664618 + B2_Mm1a SINE B2 1 193 0 1 1154 673 319 103 52 chr17 74608033 74608445 -20664206 + MER20B DNA MER1_type 200 635 -148 1 1154 400 203 23 104 chr17 74608673 74608799 -20663852 + PB1D9 SINE Alu 1 124 -3 1 1154 47 19 0 0 chr17 74608818 74608872 -20663779 + AT_rich Low_complexity Low_complexity 1 54 0 1 1154 244 348 73 37 chr17 74609559 74609723 -20662928 - L2 LINE L2 -883 2536 2367 1 1154 210 105 0 0 chr17 74609731 74609769 -20662882 + (T)n Simple_repeat Simple_repeat 1 38 0 1 1154 227 286 125 0 chr17 74609933 74609989 -20662662 + B1F1 SINE Alu 1 63 -86 1 1154 576 206 62 31 chr17 74610926 74611056 -20661595 + B1F1 SINE Alu 12 145 -4 1 1154 26 74 0 0 chr17 74614056 74614110 -20658541 + AT_rich Low_complexity Low_complexity 1 54 0 1 1154 1825 102 44 0 chr17 74614169 74614463 -20658188 + ORR1A1-int LTR MaLR 614 920 -872 1 1154 223 186 0 0 chr17 74614511 74614554 -20658097 + A-rich Low_complexity Low_complexity 1 43 0 1 1154 27 92 0 0 chr17 74615078 74615154 -20657497 + AT_rich Low_complexity Low_complexity 1 76 0 1 1154 801 200 111 33 chr17 74617249 74617430 -20655221 - B3 SINE B2 -7 209 15 1 1154 565 253 56 38 chr17 74617941 74618101 -20654550 - RSINE1 SINE B4 0 165 3 1 1154 22 35 0 0 chr17 74618515 74618544 -20654107 + AT_rich Low_complexity Low_complexity 1 29 0 1 1154 271 294 93 12 chr17 74621973 74622059 -20650592 + PB1D10 SINE Alu 9 101 -16 1 1154 243 255 0 0 chr17 74622554 74622605 -20650046 + (CATA)n Simple_repeat Simple_repeat 2 52 0 1 1154 303 250 14 133 chr17 74622631 74622774 -20649877 + MT2B LTR ERVL 139 264 -337 1 1154 748 187 21 21 chr17 74622664 74622806 -20649845 + B1_Mur4 SINE Alu 6 147 -3 1 1154 337 272 14 162 chr17 74622840 74622884 -20649767 + ID_B1 SINE B4 63 153 -139 1 1154 387 262 60 0 chr17 74622884 74622968 -20649683 + B1F2 SINE Alu 4 92 -57 1 1154 984 114 0 0 chr17 74623020 74623169 -20649482 + (GGAA)n Simple_repeat Simple_repeat 4 152 0 1 1154 328 304 163 32 chr17 74623585 74623775 -20648876 - MER20 DNA MER1_type -4 215 1 1 1154 23 0 0 0 chr17 74624928 74624951 -20647700 + AT_rich Low_complexity Low_complexity 1 23 0 1 1154 21 36 0 0 chr17 74625619 74625647 -20647004 + AT_rich Low_complexity Low_complexity 1 28 0 1 1154 22 35 0 0 chr17 74626211 74626240 -20646411 + AT_rich Low_complexity Low_complexity 1 29 0 1 1154 468 0 0 0 chr17 74626634 74626686 -20645965 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 1154 1145 55 7 7 chr17 74626922 74627069 -20645582 + B1_Mus1 SINE Alu 2 148 0 1 1154 902 159 43 11 chr17 74627309 74627493 -20645158 + B2_Mm2 SINE B2 1 190 -5 1 1154 1659 162 121 10 chr17 74627771 74628144 -20644507 + ORR1B1 LTR MaLR 6 394 0 1 1154 302 319 94 36 chr17 74628369 74628514 -20644137 + L1M4b LINE L1 1402 1555 -5779 1 1154 306 115 0 0 chr17 74628514 74628566 -20644085 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1154 302 319 94 36 chr17 74628566 74628644 -20644007 + L1M4b LINE L1 1556 1638 -5696 1 1154 234 296 141 43 chr17 74628713 74628805 -20643846 + PB1D10 SINE Alu 2 102 -15 1 1154 2863 61 5 8 chr17 74628935 74629318 -20643333 - MTA_Mm LTR MaLR -12 384 3 1 1154 7040 71 35 74 chr17 74629320 74630459 -20642192 - MTA_Mm-int LTR MaLR 0 1098 4 1 1154 1088 34 41 7 chr17 74630469 74630616 -20642035 - MTA_Mm LTR MaLR 0 396 245 1 1154 2318 60 0 0 chr17 74630616 74630918 -20641733 - L1_Mus1 LINE L1 -51 5832 5531 1 1154 4921 76 64 1 chr17 74630918 74631464 -20641187 + L1_Mus1 LINE L1 5838 6403 -164 1 1154 194 0 39 0 chr17 74631464 74631490 -20641161 + (TAAAA)n Simple_repeat Simple_repeat 3 29 0 1 1154 4921 76 64 1 chr17 74631490 74631630 -20641021 + L1_Mus1 LINE L1 6404 6567 0 1 1154 432 0 0 0 chr17 74631633 74631681 -20640970 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1154 1963 60 15 11 chr17 74631682 74631950 -20640701 - MTA_Mm LTR MaLR -127 269 1 1 1154 1603 32 21 0 chr17 74632158 74632347 -20640304 + B2_Mm1a SINE B2 1 193 0 1 1154 242 204 226 43 chr17 74632491 74632655 -20639996 + L1MC2 LINE L1 6032 6225 -119 1 1154 621 283 18 36 chr17 74633112 74633332 -20639319 - B3 SINE B2 0 216 1 1 1154 658 214 14 20 chr17 74633680 74633828 -20638823 + B1_Mus1 SINE Alu 1 147 -1 1 1154 1215 48 7 0 chr17 74633992 74634139 -20638512 - B1_Mus1 SINE Alu 0 148 1 1 1154 772 275 98 15 chr17 74634294 74634560 -20638091 + B4A SINE B4 2 289 -3 1 1154 32 43 0 0 chr17 74634612 74634658 -20637993 + AT_rich Low_complexity Low_complexity 1 46 0 1 1154 329 224 71 45 chr17 74634724 74634836 -20637815 + PB1D7 SINE Alu 6 120 0 1 1154 188 268 93 93 chr17 74635501 74635608 -20637043 - L4 LINE RTE -849 1180 1074 1 1154 540 326 21 32 chr17 74635856 74636043 -20636608 + B4A SINE B4 108 292 0 1 1154 271 354 44 9 chr17 74636344 74636458 -20636193 + MLT1H-int LTR MaLR 636 753 -656 1 1154 3023 143 52 63 chr17 74636466 74636950 -20635701 + RLTR20A2 LTR ERVK 8 488 -90 1 1154 609 14 0 0 chr17 74636950 74637020 -20635631 + (TG)n Simple_repeat Simple_repeat 2 71 0 1 1154 3023 143 52 63 chr17 74637020 74637109 -20635542 + RLTR20A2 LTR ERVK 489 574 -4 1 1154 252 86 0 0 chr17 74637291 74637326 -20635325 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 1 1154 596 165 0 10 chr17 74637347 74637451 -20635200 - B1_Mur3 SINE Alu -1 148 46 1 1154 1045 55 0 0 chr17 74637494 74637622 -20635029 + B1_Mus1 SINE Alu 2 129 -19 1 1154 486 0 0 0 chr17 74637622 74637676 -20634975 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1154 191 62 0 59 chr17 74637679 74637713 -20634938 + (GGGA)n Simple_repeat Simple_repeat 1 32 0 1 1154 694 215 63 69 chr17 74638352 74638444 -20634207 + ORR1D1 LTR MaLR 20 113 -261 1 1154 1015 92 0 0 chr17 74638444 74638575 -20634076 + B1_Mus1 SINE Alu 2 132 -16 1 1154 694 215 63 69 chr17 74638575 74638657 -20633994 + ORR1D1 LTR MaLR 114 193 -181 1 1154 439 67 0 16 chr17 74638661 74638722 -20633929 + ORR1D1 LTR MaLR 311 370 -4 1 1154 227 382 19 10 chr17 74638856 74638959 -20633692 + MLT1H LTR MaLR 79 182 -367 1 1154 522 165 112 9 chr17 74639534 74639650 -20633001 + B1F SINE Alu 21 148 -1 1 1154 351 307 19 14 chr17 74639773 74639892 -20632759 + PB1D7 SINE Alu 1 120 0 1 1154 991 199 20 25 chr17 74639896 74640097 -20632554 + B3 SINE B2 12 211 -5 1 1154 777 214 225 0 chr17 74640373 74640546 -20632105 + B3 SINE B2 5 216 0 1 1154 451 290 21 14 chr17 74641973 74642113 -20630538 + B1F1 SINE Alu 1 141 -8 1 1154 297 219 96 41 chr17 74642293 74642460 -20630191 + B3 SINE B2 20 190 -5 1 1154 21 0 0 0 chr17 74642674 74642695 -20629956 + AT_rich Low_complexity Low_complexity 1 21 0 1 1154 23 68 0 0 chr17 74642819 74642863 -20629788 + AT_rich Low_complexity Low_complexity 1 44 0 1 1154 367 240 57 19 chr17 74642863 74642880 -20629771 + B4 SINE B4 70 90 -202 1 1154 595 142 10 3 chr17 74642880 74642995 -20629656 + B1_Mur3 SINE Alu 1 114 -6 1 1154 270 238 40 0 chr17 74642997 74643098 -20629553 + GA-rich Low_complexity Low_complexity 5 109 0 1 1154 649 299 58 79 chr17 74643137 74643428 -20629223 + B4 SINE B4 8 292 0 1 1154 527 360 19 71 chr17 74643479 74643787 -20628864 + B4A SINE B4 1 292 0 1 1154 195 129 0 0 chr17 74643816 74643847 -20628804 + (CATA)n Simple_repeat Simple_repeat 4 34 0 1 1154 22 70 0 0 chr17 74644214 74644257 -20628394 + AT_rich Low_complexity Low_complexity 1 43 0 1 1154 382 316 28 25 chr17 74644562 74644710 -20627941 + MLT1B LTR MaLR 4 149 -318 1 1154 441 286 55 8 chr17 74644710 74644837 -20627814 + B1F1 SINE Alu 1 133 -16 1 1154 321 312 48 41 chr17 74644916 74645063 -20627588 + MLT1B LTR MaLR 225 372 -18 1 1154 276 292 42 73 chr17 74645735 74645831 -20626820 + B1F2 SINE Alu 3 95 -54 1 1154 276 127 0 0 chr17 74645851 74645906 -20626745 + (A)n Simple_repeat Simple_repeat 1 55 0 1 1154 297 0 0 0 chr17 74645980 74646013 -20626638 + (CAGG)n Simple_repeat Simple_repeat 4 36 0 1 1154 423 0 0 0 chr17 74646013 74646059 -20626592 + (TGAA)n Simple_repeat Simple_repeat 2 48 0 1 1154 758 190 39 39 chr17 74646292 74646473 -20626178 - B2_Mm2 SINE B2 -14 181 1 1 1154 345 259 71 36 chr17 74646739 74646851 -20625800 + PB1D10 SINE Alu 2 117 0 1 1154 203 250 0 0 chr17 74646851 74646891 -20625760 + polypurine Low_complexity Low_complexity 1 40 0 1 1154 638 206 29 14 chr17 74647046 74647184 -20625467 + B1_Mur2 SINE Alu 1 140 -9 2 1154 662 140 35 0 chr17 74648294 74648408 -20624243 + B1_Mur4 SINE Alu 33 150 0 2 1154 1246 41 0 0 chr17 74648412 74648558 -20624093 + B1_Mus2 SINE Alu 2 147 0 2 1154 243 61 0 0 chr17 74648560 74648593 -20624058 + (A)n Simple_repeat Simple_repeat 1 33 0 2 1154 736 283 41 66 chr17 74648704 74648946 -20623705 - B4A SINE B4 -18 274 39 2 1154 351 299 75 52 chr17 74649412 74649622 -20623029 + Charlie1a DNA MER1_type 303 517 -938 2 1154 1251 45 0 0 chr17 74649622 74649776 -20622875 + B2_Mm2 SINE B2 2 155 -40 2 1154 615 14 0 0 chr17 74649776 74649848 -20622803 + (TAGA)n Simple_repeat Simple_repeat 3 74 0 2 1154 848 181 69 46 chr17 74649848 74649867 -20622784 + B3 SINE B2 162 179 -37 2 1154 465 308 0 24 chr17 74650173 74650296 -20622355 + PB1D7 SINE Alu 1 120 0 2 1154 356 153 12 0 chr17 74650348 74650433 -20622218 + (TA)n Simple_repeat Simple_repeat 2 87 0 2 1154 503 187 56 0 chr17 74650444 74650551 -20622100 - PB1D9 SINE Alu -7 113 1 2 1154 438 20 0 0 chr17 74650836 74650887 -20621764 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1154 725 231 28 106 chr17 74650888 74651067 -20621584 - B3 SINE B2 -50 166 2 2 1154 257 296 8 25 chr17 74651197 74651315 -20621336 - Lx7 LINE L1 -16 7680 7565 2 1154 203 224 0 33 chr17 74651315 74651375 -20621276 + A-rich Low_complexity Low_complexity 3 60 0 2 1154 1238 74 68 0 chr17 74653072 74653092 -20619559 - B2_Mm1t SINE B2 -4 189 170 2 1154 360 0 0 0 chr17 74653092 74653132 -20619519 + (TTA)n Simple_repeat Simple_repeat 3 42 0 2 1154 1238 74 68 0 chr17 74653132 74653287 -20619364 - B2_Mm1t SINE B2 -24 169 3 2 1154 426 282 14 78 chr17 74653400 74653542 -20619109 - B1F1 SINE Alu -15 134 2 2 1154 358 191 29 0 chr17 74654854 74654922 -20617729 + ID4_ SINE ID 4 73 -10 2 1154 489 17 0 0 chr17 74655160 74655218 -20617433 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1154 490 223 200 10 chr17 74655425 74655620 -20617031 - MER63C DNA AcHobo -12 918 687 2 1154 392 240 147 0 chr17 74655636 74655765 -20616886 + B1_Mur1 SINE Alu 2 149 0 2 1154 378 204 55 54 chr17 74655809 74655976 -20616675 + L1M1 LINE L1 5660 5822 -469 2 1154 231 322 198 28 chr17 74655985 74656167 -20616484 + ID_B1 SINE B4 3 215 -9 2 1154 254 284 15 0 chr17 74656184 74656251 -20616400 + MTD LTR MaLR 79 146 -275 2 1154 791 222 108 0 chr17 74656264 74656431 -20616220 + MTD LTR MaLR 221 405 -14 2 1154 225 0 0 0 chr17 74656652 74656677 -20615974 + (TGGA)n Simple_repeat Simple_repeat 3 27 0 2 1154 717 243 21 0 chr17 74656844 74656988 -20615663 + B3 SINE B2 2 148 -68 2 1154 285 29 0 0 chr17 74657242 74657276 -20615375 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 1154 382 269 102 0 chr17 74657357 74657491 -20615160 - B3 SINE B2 -7 188 55 2 1154 462 36 0 0 chr17 74658298 74658354 -20614297 + (GA)n Simple_repeat Simple_repeat 2 57 0 2 1154 1164 44 0 0 chr17 74658384 74658521 -20614130 + B1_Mus2 SINE Alu 2 138 -9 2 1154 247 353 207 7 chr17 74658586 74658891 -20613760 + L2 LINE L2 924 1289 -2130 2 1154 332 292 126 52 chr17 74658894 74659125 -20613526 + B4A SINE B4 31 278 -14 2 1154 281 220 34 0 chr17 74659433 74659492 -20613159 + MER81 DNA AcHobo 22 82 -32 2 1154 833 219 42 42 chr17 74659876 74660067 -20612584 - B3 SINE B2 -25 191 1 2 1154 276 276 130 80 chr17 74660337 74660475 -20612176 + MER5A DNA MER1_type 36 180 -9 2 1154 304 122 0 0 chr17 74660682 74660723 -20611928 - B1_Mur1 SINE Alu -7 142 102 2 1154 191 45 65 22 chr17 74660732 74660778 -20611873 + (TAA)n Simple_repeat Simple_repeat 1 48 0 2 1154 229 309 0 0 chr17 74660778 74660833 -20611818 + polypurine Low_complexity Low_complexity 1 55 0 2 1154 739 249 52 0 chr17 74661379 74661572 -20611079 + B3 SINE B2 1 203 -13 2 1154 299 385 9 0 chr17 74661804 74661913 -20610738 + PB1D10 SINE Alu 1 110 -7 2 1154 572 263 112 31 chr17 74662103 74662143 -20610508 + B3 SINE B2 2 48 -168 2 1154 1184 48 7 0 chr17 74662143 74662288 -20610363 + B1_Mus2 SINE Alu 2 147 0 2 1154 572 263 112 31 chr17 74662288 74662443 -20610208 + B3 SINE B2 49 213 -3 2 1154 204 40 0 0 chr17 74662580 74662605 -20610046 + (GA)n Simple_repeat Simple_repeat 1 25 0 2 1154 1277 92 27 0 chr17 74662631 74662815 -20609836 + B2_Mm2 SINE B2 1 189 -6 2 1154 241 385 125 27 chr17 74662823 74662935 -20609716 - RSINE1 SINE B4 -41 124 2 2 1154 217 87 85 21 chr17 74663609 74663656 -20608995 + B3A SINE B2 1 50 -148 2 1154 472 181 110 17 chr17 74663757 74663875 -20608776 - B1_Mur3 SINE Alu -19 130 2 2 1154 204 135 0 26 chr17 74664529 74664567 -20608084 + (CAG)n Simple_repeat Simple_repeat 3 39 0 2 1154 252 0 0 0 chr17 74665166 74665194 -20607457 + (A)n Simple_repeat Simple_repeat 1 28 0 2 1154 221 286 0 20 chr17 74665331 74665381 -20607270 + ID4_ SINE ID 32 80 -3 2 1154 307 342 13 15 chr17 74665412 74665508 -20607143 + B1F SINE Alu 4 97 -20 2 1154 1136 193 30 20 chr17 74665529 74665706 -20606945 + RMER17C LTR ERVK 1 178 -232 2 1154 279 0 0 0 chr17 74665706 74665737 -20606914 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1154 1136 193 30 20 chr17 74665737 74665855 -20606796 + RMER17C LTR ERVK 179 298 -112 2 1154 240 35 0 0 chr17 74665890 74665919 -20606732 + (TC)n Simple_repeat Simple_repeat 2 30 0 2 1154 525 245 132 50 chr17 74665948 74666107 -20606544 + B3A SINE B2 20 191 -7 2 1154 1233 34 7 0 chr17 74666252 74666399 -20606252 - B1_Mus1 SINE Alu 0 148 1 2 1154 648 288 25 18 chr17 74666992 74667155 -20605496 + RSINE1 SINE B4 2 165 0 2 1154 830 232 16 11 chr17 74667263 74667450 -20605201 + B3A SINE B2 3 190 -8 2 1154 186 133 0 0 chr17 74667753 74667783 -20604868 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 2 1154 242 304 43 86 chr17 74668766 74668933 -20603718 - B3 SINE B2 -14 184 27 2 1154 901 91 8 0 chr17 74668931 74669063 -20603588 - B1_Mus2 SINE Alu 0 147 15 2 1154 1035 71 49 7 chr17 74669266 74669408 -20603243 + B1_Mus1 SINE Alu 1 148 0 2 1154 583 272 88 97 chr17 74669753 74670209 -20602442 + LTR73 LTR ERV1 28 479 -93 2 1154 986 88 80 0 chr17 74670322 74670459 -20602192 + B1_Mus1 SINE Alu 1 148 0 2 1154 290 62 0 40 chr17 74670459 74670509 -20602142 + (CAAAAA)n Simple_repeat Simple_repeat 6 53 0 2 1154 475 221 18 0 chr17 74670812 74670925 -20601726 + B1_Mur4 SINE Alu 15 129 -21 2 1154 557 189 102 0 chr17 74671244 74671371 -20601280 - B1_Mur4 SINE Alu -10 140 1 2 1154 338 250 10 80 chr17 74671439 74671515 -20601136 + ORR1D2 LTR MaLR 246 314 -56 2 1154 921 105 80 6 chr17 74671515 74671678 -20600973 + RMER6B LTR ERVK 3 177 -284 2 1154 1677 190 18 67 chr17 74671694 74672171 -20600480 + RMER17B LTR ERVK 370 808 -100 2 1154 315 0 0 0 chr17 74672439 74672474 -20600177 + (TC)n Simple_repeat Simple_repeat 1 35 0 2 1154 751 201 14 14 chr17 74672959 74673105 -20599546 + B1_Mur3 SINE Alu 4 149 0 2 1154 328 266 93 78 chr17 74673194 74673398 -20599253 + L1MD3 LINE L1 7385 7591 -404 2 1154 241 255 46 93 chr17 74673465 74673476 -20599175 + MT2B2 LTR ERVL 155 160 -424 2 1154 353 349 31 0 chr17 74673476 74673605 -20599046 + B1F1 SINE Alu 4 136 -13 2 1154 306 67 0 0 chr17 74673605 74673650 -20599001 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 1154 275 238 204 23 chr17 74673650 74673826 -20598825 + L1MD3 LINE L1 7646 7853 -142 2 1154 400 254 149 21 chr17 74673836 74673913 -20598738 - B3 SINE B2 -54 162 81 2 1154 378 0 0 0 chr17 74673913 74673955 -20598696 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1154 400 254 149 21 chr17 74673955 74674018 -20598633 - B3 SINE B2 -136 80 4 2 1154 202 216 0 0 chr17 74674031 74674068 -20598583 + (TAGG)n Simple_repeat Simple_repeat 3 39 0 2 1154 200 302 50 75 chr17 74674213 74674374 -20598277 - L2a LINE L2 -1 3425 3269 2 1154 749 143 0 29 chr17 74674475 74674612 -20598039 - B1_Mus1 SINE Alu 0 148 16 2 1154 312 200 0 16 chr17 74674848 74674909 -20597742 + B3A SINE B2 3 62 -136 2 1154 291 279 19 41 chr17 74675065 74675185 -20597466 + B3A SINE B2 48 165 -51 2 1154 2425 87 146 7 chr17 74675201 74675618 -20597033 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1154 518 227 108 8 chr17 74675677 74675806 -20596845 + B1_Mm SINE Alu 1 142 -5 2 1154 604 168 16 0 chr17 74675806 74675931 -20596720 + GA-rich Low_complexity Low_complexity 2 128 0 2 1154 304 306 0 65 chr17 74675937 74675975 -20596676 + ID4_ SINE ID 2 39 -44 2 1154 1175 237 91 42 chr17 74675975 74676328 -20596323 + ORR1D2 LTR MaLR 1 370 0 2 1154 304 257 0 108 chr17 74676328 74676379 -20596272 + ID4_ SINE ID 40 83 -69 2 1154 443 244 8 57 chr17 74676380 74676502 -20596149 + PB1D10 SINE Alu 2 117 0 2 1154 652 112 28 0 chr17 74677376 74677483 -20595168 - RMER4B LTR ERVK 0 585 476 2 1154 402 241 111 8 chr17 74677647 74677764 -20594887 + B3 SINE B2 2 130 -86 2 1154 192 77 0 0 chr17 74677796 74677822 -20594829 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 1154 335 252 153 0 chr17 74678353 74678464 -20594187 + B1F1 SINE Alu 1 128 -21 2 1154 229 270 0 0 chr17 74678496 74678559 -20594092 + B3A SINE B2 38 100 -98 2 1154 21 36 0 0 chr17 74678605 74678633 -20594018 + AT_rich Low_complexity Low_complexity 1 28 0 2 1154 485 271 24 55 chr17 74678693 74678857 -20593794 + RSINE1 SINE B4 1 159 -6 2 1154 375 23 0 0 chr17 74678878 74678922 -20593729 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1154 195 42 0 0 chr17 74679003 74679027 -20593624 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 1154 216 0 0 0 chr17 74679099 74679123 -20593528 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 1154 255 125 0 0 chr17 74679129 74679169 -20593482 + (CGAA)n Simple_repeat Simple_repeat 1 40 0 3 1154 282 208 23 105 chr17 74679177 74679188 -20593463 + MT2B LTR ERVL 156 159 -442 3 1154 525 271 31 0 chr17 74679188 74679317 -20593334 + B1_Mur1 SINE Alu 3 135 -14 3 1154 538 279 22 14 chr17 74679378 74679516 -20593135 + B1_Mur1 SINE Alu 5 143 -6 3 1154 1127 87 43 16 chr17 74679526 74679682 -20592969 + B2_Mm2 SINE B2 2 165 -30 3 1154 2183 82 35 6 chr17 74679682 74680001 -20592650 + L1_Mus3 LINE L1 6310 6637 -1 3 1154 1127 87 43 16 chr17 74680001 74680031 -20592620 + B2_Mm2 SINE B2 166 193 -2 3 1154 492 202 0 11 chr17 74680202 74680297 -20592354 + B3A SINE B2 27 120 -78 3 1154 765 242 15 26 chr17 74680425 74680620 -20592031 + B3 SINE B2 15 207 -9 3 1154 233 235 141 0 chr17 74680852 74680937 -20591714 + PB1 SINE Alu 9 105 -22 3 1154 456 257 9 0 chr17 74680861 74680966 -20591685 + ID_B1 SINE B4 99 204 -20 3 1154 642 309 59 13 chr17 74681212 74681448 -20591203 + B4 SINE B4 1 247 -45 3 1154 387 0 0 0 chr17 74681476 74681519 -20591132 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1154 543 101 0 0 chr17 74681674 74681753 -20590898 + (CA)n Simple_repeat Simple_repeat 1 79 0 3 1154 365 121 0 0 chr17 74681770 74681828 -20590823 + B2_Mm2 SINE B2 1 58 -137 3 1154 35 63 0 0 chr17 74681884 74681947 -20590704 + AT_rich Low_complexity Low_complexity 1 63 0 3 1154 432 0 0 0 chr17 74681947 74681995 -20590656 + (TTA)n Simple_repeat Simple_repeat 2 49 0 3 1154 533 259 152 24 chr17 74682007 74682217 -20590434 + MTD LTR MaLR 169 405 -14 3 1154 212 359 37 19 chr17 74682703 74682811 -20589840 - L2b LINE L2 -332 3043 2934 3 1154 1156 62 7 0 chr17 74682890 74683036 -20589615 + B1_Mus2 SINE Alu 1 147 0 3 1154 23 54 0 0 chr17 74683083 74683120 -20589531 + AT_rich Low_complexity Low_complexity 1 37 0 3 1154 328 250 0 0 chr17 74683125 74683193 -20589458 - B3 SINE B2 -10 206 139 3 1154 522 117 6 250 chr17 74683263 74683423 -20589228 - B1_Mur4 SINE Alu 0 150 28 3 1154 378 248 22 104 chr17 74683392 74683527 -20589124 - ID_B1 SINE B4 -85 139 16 3 1154 643 161 202 0 chr17 74683692 74683816 -20588835 + B1_Mur4 SINE Alu 2 150 0 3 1154 180 0 0 0 chr17 74683816 74683836 -20588815 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1154 327 307 70 48 chr17 74683875 74684104 -20588547 + L2 LINE L2 2413 2646 -773 3 1154 719 240 70 28 chr17 74684177 74684391 -20588260 + ID_B1 SINE B4 2 224 0 3 1154 503 236 138 19 chr17 74684486 74684548 -20588103 + ID SINE ID 7 87 -137 3 1154 327 269 27 55 chr17 74684548 74684658 -20587993 + PB1D10 SINE Alu 4 110 -7 3 1154 235 259 100 11 chr17 74684678 74684768 -20587883 + RSINE1 SINE B4 4 101 -64 3 1154 268 250 175 0 chr17 74685252 74685372 -20587279 + MIRb SINE MIR 68 208 -60 3 1154 221 231 119 30 chr17 74685445 74685512 -20587139 - B3 SINE B2 -70 146 74 3 1154 231 130 0 80 chr17 74685616 74685666 -20586985 - B3 SINE B2 -170 46 1 3 1154 235 189 0 0 chr17 74685747 74685784 -20586867 - B3 SINE B2 -96 120 84 3 1154 237 200 0 0 chr17 74685786 74685831 -20586820 - B2_Mm2 SINE B2 -150 45 1 3 1154 575 242 126 13 chr17 74685847 74685998 -20586653 - B3 SINE B2 0 216 49 3 1154 1107 94 105 0 chr17 74685998 74686169 -20586482 + B2_Mm2 SINE B2 1 189 -6 3 1154 1613 26 21 5 chr17 74686394 74686584 -20586067 - B2_Mm1a SINE B2 0 193 1 3 1154 532 182 10 0 chr17 74686639 74686738 -20585913 - MTC LTR MaLR -321 100 1 3 1154 321 261 178 31 chr17 74686738 74686825 -20585826 + L1M5 LINE L1 5488 5598 -575 3 1154 4522 99 194 12 chr17 74686825 74687588 -20585063 - RMER19B LTR ERVK 0 902 1 3 1154 321 261 178 31 chr17 74687588 74687792 -20584859 + L1M5 LINE L1 5599 5822 -351 3 1154 1416 73 5 40 chr17 74688747 74688946 -20583705 + B2_Mm1a SINE B2 2 193 0 3 1154 251 130 19 0 chr17 74688947 74689001 -20583650 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 3 1154 576 250 14 42 chr17 74689163 74689305 -20583346 - B1_Mur2 SINE Alu -10 139 2 3 1154 856 294 81 22 chr17 74689497 74689855 -20582796 - MTE2b LTR MaLR 0 379 1 3 1154 575 314 6 0 chr17 74689925 74690084 -20582567 + RSINE1 SINE B4 6 165 0 3 1154 32 26 0 0 chr17 74690089 74690128 -20582523 + AT_rich Low_complexity Low_complexity 1 39 0 3 1154 823 154 14 34 chr17 74690693 74690841 -20581810 + B1_Mur2 SINE Alu 5 149 0 3 1154 28 48 0 0 chr17 74690841 74690883 -20581768 + AT_rich Low_complexity Low_complexity 1 42 0 3 1154 345 256 122 0 chr17 74690922 74691012 -20581639 + PB1D9 SINE Alu 20 120 0 3 1154 564 154 182 0 chr17 74692028 74692138 -20580513 + B1_Mus1 SINE Alu 2 131 -17 3 1154 1164 62 0 0 chr17 74692564 74692710 -20579941 + B1_Mus1 SINE Alu 1 146 -2 3 1154 207 0 0 0 chr17 74692710 74692733 -20579918 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3 1154 27 112 0 0 chr17 74693868 74693993 -20578658 + GC_rich Low_complexity Low_complexity 1 125 0 3 1154 294 29 0 0 chr17 74694225 74694260 -20578391 + (GGA)n Simple_repeat Simple_repeat 3 37 0 3 1154 25 51 0 0 chr17 74694344 74694383 -20578268 + GC_rich Low_complexity Low_complexity 1 39 0 3 1154 22 35 0 0 chr17 74694409 74694438 -20578213 + GC_rich Low_complexity Low_complexity 1 29 0 3 1154 212 125 27 40 chr17 74694487 74694562 -20578089 + (CCCCG)n Simple_repeat Simple_repeat 3 76 0 3 1154 21 0 0 0 chr17 74694790 74694811 -20577840 + GC_rich Low_complexity Low_complexity 1 21 0 3 1154 584 199 71 162 chr17 74695847 74696045 -20576606 + B3A SINE B2 4 183 -15 3 1154 1220 98 6 0 chr17 74696052 74696235 -20576416 - B2_Mm1a SINE B2 -4 189 6 3 1154 354 225 79 55 chr17 74696284 74696301 -20576350 - B1F SINE Alu 0 149 128 3 1154 180 0 0 0 chr17 74696301 74696321 -20576330 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 1154 1181 43 0 0 chr17 74696321 74696460 -20576191 - B1_Mus2 SINE Alu -8 139 1 3 1154 555 200 104 30 chr17 74696460 74696593 -20576058 - B1_Mur1 SINE Alu -2 147 4 3 1154 359 226 81 52 chr17 74696593 74696709 -20575942 - B1F2 SINE Alu -22 127 1 3 1154 352 238 24 0 chr17 74697053 74697137 -20575514 - B1_Mm SINE Alu -55 92 7 3 1154 472 297 84 54 chr17 74697154 74697357 -20575294 - B4A SINE B4 -82 210 2 3 1154 470 146 0 0 chr17 74697432 74697514 -20575137 - B3 SINE B2 -134 82 1 3 1154 1107 59 0 0 chr17 74697546 74697681 -20574970 + B1_Mm SINE Alu 1 135 -12 3 1154 509 173 126 9 chr17 74697752 74697863 -20574788 + B1_Mm SINE Alu 1 124 -23 3 1154 382 165 69 23 chr17 74697899 74697986 -20574665 - PB1D9 SINE Alu -28 92 2 3 1154 391 192 110 55 chr17 74698374 74698501 -20574150 - B3 SINE B2 -82 134 1 3 1154 315 280 119 18 chr17 74699433 74699542 -20573109 - RSINE1 SINE B4 -30 135 16 3 1154 569 227 49 7 chr17 74699648 74699790 -20572861 + B1_Mur1 SINE Alu 2 149 0 3 1154 1196 48 0 7 chr17 74699796 74699944 -20572707 + B1_Mus1 SINE Alu 2 148 0 3 1154 380 279 70 0 chr17 74700166 74700295 -20572356 - RSINE1 SINE B4 -25 140 3 3 1154 21 0 0 0 chr17 74700297 74700318 -20572333 + AT_rich Low_complexity Low_complexity 1 21 0 3 1154 230 285 0 210 chr17 74700553 74700753 -20571898 + ID_B1 SINE B4 47 204 -20 3 1154 439 315 14 0 chr17 74700798 74700941 -20571710 + B1F2 SINE Alu 2 146 -3 3 1154 673 176 48 27 chr17 74701067 74701200 -20571451 + B1_Mur4 SINE Alu 1 137 -13 3 1154 1171 68 0 0 chr17 74701200 74701347 -20571304 + B1_Mus2 SINE Alu 1 147 0 3 1154 673 176 48 27 chr17 74701347 74701359 -20571292 + B1_Mur4 SINE Alu 138 149 -1 3 1154 869 156 37 75 chr17 74701359 74701546 -20571105 - B2_Mm2 SINE B2 -14 181 2 3 1154 596 81 208 75 chr17 74701608 74701728 -20570923 - B1_Mus1 SINE Alu -12 136 1 3 1154 581 144 18 26 chr17 74701731 74701845 -20570806 - B1_Mur3 SINE Alu 0 149 37 3 1154 418 217 22 0 chr17 74701858 74701950 -20570701 + PB1D9 SINE Alu 19 112 -8 3 1154 524 301 14 0 chr17 74702707 74702850 -20569801 + ID_B1 SINE B4 79 223 -1 3 1154 350 236 0 0 chr17 74702946 74703018 -20569633 - ID4_ SINE ID -10 73 2 3 1154 414 0 0 0 chr17 74703167 74703213 -20569438 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1154 459 181 12 0 chr17 74703246 74703329 -20569322 - B3 SINE B2 -94 122 39 3 1154 373 257 36 27 chr17 74703352 74703464 -20569187 - PB1D9 SINE Alu -6 114 2 3 1154 585 257 26 0 chr17 74703496 74703648 -20569003 + RSINE1 SINE B4 4 159 -6 3 1154 863 236 10 29 chr17 74703951 74704156 -20568495 + B3 SINE B2 2 202 -14 3 1154 366 80 0 0 chr17 74704168 74704218 -20568433 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1154 1061 30 0 0 chr17 74704241 74704376 -20568275 + B1_Mus1 SINE Alu 14 148 0 3 1154 252 231 0 25 chr17 74704376 74704402 -20568249 + A-rich Low_complexity Low_complexity 1 26 0 3 1154 1503 49 5 5 chr17 74704402 74704586 -20568065 + B2_Mm2 SINE B2 2 185 -10 3 1154 252 231 0 25 chr17 74704586 74704639 -20568012 + A-rich Low_complexity Low_complexity 27 78 0 3 1154 22 35 0 0 chr17 74704968 74704997 -20567654 + AT_rich Low_complexity Low_complexity 1 29 0 3 1154 269 197 82 0 chr17 74705073 74705134 -20567517 + PB1D10 SINE Alu 27 92 -25 3 1154 449 291 128 0 chr17 74705170 74705318 -20567333 + ID_B1 SINE B4 24 190 -34 3 1154 570 189 9 0 chr17 74705524 74705630 -20567021 + B3 SINE B2 1 107 -109 3 1154 387 0 0 0 chr17 74705703 74705746 -20566905 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 4 1154 1223 50 0 0 chr17 74705746 74705905 -20566746 - B2_Mm1t SINE B2 -33 160 2 4 1154 26 30 0 0 chr17 74705906 74705939 -20566712 + AT_rich Low_complexity Low_complexity 1 33 0 4 1154 35 16 0 62 chr17 74705974 74706017 -20566634 + AT_rich Low_complexity Low_complexity 1 41 0 4 1154 783 62 457 0 chr17 74706017 74706146 -20566505 + B2_Mm1t SINE B2 1 188 -5 4 1154 35 16 0 62 chr17 74706146 74706167 -20566484 + AT_rich Low_complexity Low_complexity 1 20 0 4 1154 1187 98 29 0 chr17 74706168 74706341 -20566310 + B2_Mm2 SINE B2 1 178 -17 4 1154 414 0 0 0 chr17 74706341 74706387 -20566264 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1154 830 182 0 13 chr17 74706387 74706537 -20566114 + B1_Mus1 SINE Alu 1 148 0 4 1154 21 58 0 19 chr17 74706538 74706568 -20566083 + AT_rich Low_complexity Low_complexity 1 30 0 4 1154 1162 81 0 0 chr17 74706568 74706716 -20565935 + B1_Mus1 SINE Alu 1 148 0 4 1154 21 58 0 19 chr17 74706716 74706738 -20565913 + AT_rich Low_complexity Low_complexity 1 22 0 4 1154 480 246 147 7 chr17 74706750 74706893 -20565758 + RSINE1 SINE B4 2 164 -1 4 1154 30 0 0 0 chr17 74706913 74706943 -20565708 + AT_rich Low_complexity Low_complexity 1 30 0 4 1154 866 185 143 0 chr17 74707386 74707575 -20565076 - B3 SINE B2 0 216 1 4 1154 293 0 27 0 chr17 74707627 74707664 -20564987 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1154 696 186 8 0 chr17 74707668 74707792 -20564859 - B1_Mus2 SINE Alu -21 126 2 4 1154 678 221 154 6 chr17 74707966 74708148 -20564503 + B3 SINE B2 1 209 -7 4 1154 763 263 40 0 chr17 74708312 74708487 -20564164 + ID_B1 SINE B4 30 211 -13 4 1154 453 222 20 0 chr17 74708511 74708610 -20564041 + PB1D9 SINE Alu 20 120 0 4 1154 310 184 211 0 chr17 74708677 74708742 -20563909 + B1_Mur4 SINE Alu 15 95 -55 4 1154 1073 119 48 21 chr17 74708742 74708931 -20563720 + B2_Mm2 SINE B2 1 194 -1 4 1154 247 114 0 64 chr17 74708932 74708979 -20563672 + B1_Mm SINE Alu 90 133 -14 4 1154 290 267 77 11 chr17 74708989 74709080 -20563571 + B3A SINE B2 35 131 -67 4 1154 381 22 0 0 chr17 74709096 74709142 -20563509 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1154 1102 271 13 39 chr17 74709289 74709696 -20562955 + MTE2b LTR MaLR 11 405 -14 4 1154 242 311 76 47 chr17 74709927 74710099 -20562552 + L1MEc LINE L1 197 373 -6027 4 1154 435 251 54 102 chr17 74710263 74710337 -20562314 + L1MEc LINE L1 638 710 -5690 4 1154 1351 97 38 0 chr17 74710337 74710523 -20562128 + B2_Mm2 SINE B2 1 193 -2 4 1154 435 251 54 102 chr17 74710523 74710634 -20562017 + L1MEc LINE L1 711 814 -5586 4 1154 600 199 14 35 chr17 74710670 74710811 -20561840 + B1_Mur2 SINE Alu 11 148 -1 4 144 881 205 86 11 chr17 74710913 74711100 -20561551 + B3 SINE B2 1 201 -15 4 1155 1346 152 218 12 chr17 74711100 74711440 -20561211 + MTD LTR MaLR 2 411 -8 4 1155 318 67 0 0 chr17 74711457 74711502 -20561149 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1155 210 143 0 0 chr17 74711502 74711551 -20561100 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 1155 219 312 12 24 chr17 74711559 74711641 -20561010 - PB1D9 SINE Alu -13 107 27 4 1155 691 163 14 30 chr17 74711658 74711813 -20560838 - B1_Mur4 SINE Alu 0 150 1 4 1155 234 0 0 0 chr17 74711902 74711928 -20560723 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 4 1155 1032 98 130 30 chr17 74712058 74712227 -20560424 + B2_Mm2 SINE B2 1 186 -9 4 1155 254 290 110 0 chr17 74712334 74712434 -20560217 + PB1D9 SINE Alu 2 112 -8 4 1155 297 0 0 0 chr17 74712448 74712481 -20560170 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1155 1304 259 135 27 chr17 74712531 74713043 -20559608 + Lx8 LINE L1 6549 7115 -358 4 1155 373 287 88 13 chr17 74713058 74713217 -20559434 + Lx8 LINE L1 7301 7471 -2 4 1155 271 281 5 60 chr17 74713364 74713448 -20559203 + ID4_ SINE ID 2 83 0 4 1155 335 275 0 52 chr17 74713537 74713633 -20559018 + B4A SINE B4 3 93 -199 4 1155 989 203 9 24 chr17 74713651 74713863 -20558788 + B3 SINE B2 2 210 -6 4 1155 475 143 16 0 chr17 74713954 74714037 -20558614 + B1_Mus2 SINE Alu 47 137 -12 4 1155 489 34 0 0 chr17 74714037 74714096 -20558555 + (GA)n Simple_repeat Simple_repeat 2 60 0 4 1155 279 158 80 11 chr17 74714096 74714166 -20558485 + B3 SINE B2 53 129 -64 4 1155 692 196 40 40 chr17 74714216 74714365 -20558286 + B1_Mur2 SINE Alu 1 149 0 4 1155 290 171 14 0 chr17 74714408 74714478 -20558173 + GA-rich Low_complexity Low_complexity 2 72 0 4 1155 427 214 28 140 chr17 74714526 74714705 -20557946 + RSINE1 SINE B4 3 161 -4 4 1155 221 0 35 0 chr17 74714707 74714736 -20557915 + (TAA)n Simple_repeat Simple_repeat 1 30 0 4 1155 198 0 0 0 chr17 74714911 74714933 -20557718 + (T)n Simple_repeat Simple_repeat 1 22 0 4 1155 708 241 52 10 chr17 74715995 74716188 -20556463 + B3 SINE B2 1 201 -15 4 1155 22 0 0 0 chr17 74716333 74716355 -20556296 + AT_rich Low_complexity Low_complexity 1 22 0 4 1155 475 231 48 20 chr17 74716619 74716765 -20555886 + RMER5 LTR ERV1 42 191 -343 4 1155 1124 70 0 0 chr17 74716840 74716982 -20555669 + B1_Mus1 SINE Alu 2 143 -5 4 1155 482 0 17 0 chr17 74717002 74717060 -20555591 + (GAA)n Simple_repeat Simple_repeat 3 61 0 4 1155 198 0 0 0 chr17 74717189 74717211 -20555440 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 4 1155 399 254 131 7 chr17 74717211 74717376 -20555275 + B3A SINE B2 33 216 0 4 1155 1084 109 63 32 chr17 74717714 74717863 -20554788 - B2_Mm2 SINE B2 0 195 40 4 1155 1726 26 0 0 chr17 74717863 74718055 -20554596 - B2_Mm1a SINE B2 -1 192 1 4 1155 1084 109 63 32 chr17 74718055 74718094 -20554557 - B2_Mm2 SINE B2 -156 39 1 4 1155 1481 52 10 40 chr17 74718240 74718439 -20554212 - B2_Mm1a SINE B2 0 193 1 4 1155 678 151 0 0 chr17 74718501 74718640 -20554011 + (TG)n Simple_repeat Simple_repeat 1 139 0 4 1155 442 257 63 89 chr17 74718641 74718799 -20553852 - RSINE1 SINE B4 -1 164 11 4 1155 1175 112 26 26 chr17 74718850 74719042 -20553609 - B2_Mm1t SINE B2 -1 192 1 4 1155 968 131 58 26 chr17 74719140 74719329 -20553322 + B2_Mm2 SINE B2 1 195 0 4 1155 370 250 10 20 chr17 74719430 74719532 -20553119 + ID_B1 SINE B4 121 221 -3 4 1155 321 89 0 0 chr17 74719639 74719684 -20552967 + (T)n Simple_repeat Simple_repeat 1 45 0 4 1155 1230 34 0 7 chr17 74719686 74719834 -20552817 - B1_Mus2 SINE Alu 0 147 1 4 1155 1271 40 0 0 chr17 74719924 74720072 -20552579 + B1_Mus1 SINE Alu 1 148 0 4 1155 507 244 49 0 chr17 74720194 74720317 -20552334 - B1F SINE Alu -1 148 20 4 1155 663 179 0 8 chr17 74720330 74720448 -20552203 + B1_Mus2 SINE Alu 2 118 -29 4 1155 849 238 77 17 chr17 74720458 74720745 -20551906 + RLTR28B LTR ERVL 9 312 -169 4 1155 1069 102 0 6 chr17 74720746 74720904 -20551747 + B2_Mm2 SINE B2 2 158 -37 4 1155 180 0 0 0 chr17 74720904 74720924 -20551727 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 4 1155 236 180 0 39 chr17 74720973 74721025 -20551626 + RLTR28B LTR ERVL 461 510 -14 4 1155 526 284 59 74 chr17 74721095 74721365 -20551286 - B4A SINE B4 0 292 27 4 1155 595 55 223 27 chr17 74721396 74721501 -20551150 + B1_Mur3 SINE Alu 12 140 -9 4 1155 279 0 0 0 chr17 74721501 74721532 -20551119 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1155 824 236 45 5 chr17 74721801 74722001 -20550650 - B3 SINE B2 -7 209 2 4 1155 225 254 32 0 chr17 74722001 74722055 -20550596 - B4A SINE B4 -236 56 1 4 1155 647 271 103 13 chr17 74722055 74722266 -20550385 - B4A SINE B4 -60 232 2 4 1155 3730 115 72 62 chr17 74722277 74723017 -20549634 - RMER6A LTR ERVK 0 756 10 4 1155 373 347 5 50 chr17 74723376 74723576 -20549075 + B3A SINE B2 1 191 -7 4 1155 1149 58 0 0 chr17 74723691 74723828 -20548823 - B1_Mus1 SINE Alu -11 137 1 4 1155 1239 41 0 0 chr17 74724107 74724254 -20548397 + B1_Mus2 SINE Alu 1 147 0 4 1155 351 0 0 0 chr17 74724254 74724293 -20548358 + (A)n Simple_repeat Simple_repeat 1 39 0 4 1155 586 134 34 17 chr17 74724353 74724528 -20548123 + (TG)n Simple_repeat Simple_repeat 2 179 0 4 1155 417 200 28 5 chr17 74724541 74724752 -20547899 + (TG)n Simple_repeat Simple_repeat 1 216 0 4 1155 567 248 20 33 chr17 74724851 74725001 -20547650 - B1_Mur2 SINE Alu -1 148 1 4 1155 497 293 30 0 chr17 74725220 74725353 -20547298 + RSINE1 SINE B4 1 137 -28 4 1155 279 0 0 0 chr17 74725434 74725465 -20547186 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4 1155 1133 63 14 0 chr17 74725465 74725607 -20547044 - B1_Mus2 SINE Alu -2 145 2 4 1155 252 0 0 0 chr17 74725607 74725635 -20547016 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 4 1155 992 117 0 14 chr17 74725646 74725794 -20546857 - B1_Mus1 SINE Alu -2 146 1 4 1155 4947 61 2 8 chr17 74725806 74726431 -20546220 - L1_Mus1 LINE L1 0 6567 5947 4 1155 342 0 0 0 chr17 74726431 74726469 -20546182 + (TTTC)n Simple_repeat Simple_repeat 1 38 0 4 1155 222 42 39 77 chr17 74726470 74726522 -20546129 + T-rich Low_complexity Low_complexity 3 52 0 4 1155 1180 54 0 13 chr17 74726523 74726672 -20545979 - B1_Mus2 SINE Alu 0 147 1 4 1155 786 69 0 0 chr17 74726672 74726774 -20545877 - L1_Mus1 LINE L1 -604 5963 5862 4 1155 342 115 0 0 chr17 74726775 74726827 -20545824 + (T)n Simple_repeat Simple_repeat 1 52 0 4 1155 3685 85 0 0 chr17 74727135 74727608 -20545043 + L1_Mm LINE L1 5401 5873 -10 4 1155 382 290 8 16 chr17 74728110 74728236 -20544415 + MTEa LTR MaLR 1 125 -254 4 1155 287 267 171 24 chr17 74728267 74728390 -20544261 + MTEa LTR MaLR 230 370 -9 4 1155 277 246 0 14 chr17 74728452 74728522 -20544129 - B1_Mur1 SINE Alu -3 146 78 4 1155 31 76 0 0 chr17 74728565 74728631 -20544020 + AT_rich Low_complexity Low_complexity 1 66 0 5 1155 240 240 80 0 chr17 74729316 74729416 -20543235 - Lx9 LINE L1 -2 7642 7535 5 1155 294 79 0 0 chr17 74729411 74729449 -20543202 - L1Md_F3 LINE L1 -392 6192 6155 5 1155 318 192 0 62 chr17 74729451 74729534 -20543117 - PB1D9 SINE Alu -36 84 10 5 1155 239 0 0 31 chr17 74729587 74729619 -20543032 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 5 1155 1148 88 0 0 chr17 74729619 74729766 -20542885 - B1_Mus2 SINE Alu 0 147 1 5 1155 991 205 18 41 chr17 74730152 74730371 -20542280 - B3 SINE B2 0 216 3 5 1155 23 33 0 0 chr17 74731145 74731175 -20541476 + AT_rich Low_complexity Low_complexity 1 30 0 5 1155 770 46 266 0 chr17 74731490 74731599 -20541052 + B1_Mus2 SINE Alu 2 139 -8 5 1155 336 240 0 0 chr17 74732006 74732081 -20540570 + PB1D7 SINE Alu 6 80 -40 5 1155 306 0 0 0 chr17 74732120 74732154 -20540497 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 1155 823 216 22 16 chr17 74732163 74732347 -20540304 + B3 SINE B2 1 185 -31 5 1155 378 176 86 19 chr17 74732383 74732499 -20540152 + B1_Mur2 SINE Alu 1 118 -2 5 1155 183 156 0 0 chr17 74732536 74732568 -20540083 + (CATATA)n Simple_repeat Simple_repeat 4 35 0 5 1155 390 250 0 77 chr17 74732690 74732794 -20539857 - B3 SINE B2 -90 126 31 5 1155 372 43 0 0 chr17 74732794 74732840 -20539811 + (TTTC)n Simple_repeat Simple_repeat 2 47 0 5 1155 909 108 21 0 chr17 74732842 74732998 -20539653 - B2_Mm2 SINE B2 -15 178 2 5 1155 233 175 0 0 chr17 74732998 74733038 -20539613 - B2_Mm2 SINE B2 -153 42 3 5 1155 1184 166 56 32 chr17 74733122 74733494 -20539157 + RMER17C LTR ERVK 16 439 -519 5 1155 775 170 41 0 chr17 74733485 74733632 -20539019 + RMER10B LTR ERVL 246 398 0 5 1155 740 236 12 24 chr17 74733902 74734067 -20538584 - RSINE1 SINE B4 0 165 3 5 1155 353 306 43 45 chr17 74734120 74734316 -20538335 + MLT1H LTR MaLR 273 525 -24 5 1155 1153 41 0 27 chr17 74734564 74734713 -20537938 + B1_Mus1 SINE Alu 4 148 0 5 1155 261 0 0 0 chr17 74734768 74734797 -20537854 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1155 229 267 16 16 chr17 74735252 74735313 -20537338 - RSINE1 SINE B4 -91 74 14 5 1155 1146 61 0 33 chr17 74735346 74735498 -20537153 - B1_Mus1 SINE Alu 0 148 2 5 1155 183 100 0 0 chr17 74735510 74735540 -20537111 + (C)n Simple_repeat Simple_repeat 1 30 0 5 1155 388 232 12 0 chr17 74735648 74735730 -20536921 + ID4 SINE ID 1 83 0 5 1155 247 286 49 102 chr17 74735745 74736010 -20536641 + L1ME3B LINE L1 5724 5974 -266 5 1155 409 187 59 58 chr17 74736017 74736122 -20536529 + PB1D9 SINE Alu 4 114 -13 5 1155 188 35 35 0 chr17 74736122 74736151 -20536500 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 5 1155 1408 70 11 11 chr17 74736288 74736477 -20536174 - B2_Mm2 SINE B2 -6 189 1 5 1155 333 0 0 0 chr17 74736584 74736621 -20536030 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 1155 437 252 0 43 chr17 74737627 74737743 -20534908 + ID_B1 SINE B4 78 188 -36 5 1155 225 0 0 0 chr17 74738144 74738169 -20534482 + (GGA)n Simple_repeat Simple_repeat 1 25 0 5 1155 228 192 0 37 chr17 74738276 74738330 -20534321 + (CCG)n Simple_repeat Simple_repeat 1 52 0 5 1155 234 180 0 20 chr17 74738441 74738492 -20534159 + C-rich Low_complexity Low_complexity 6 55 0 5 1155 23 33 0 0 chr17 74738808 74738838 -20533813 + GC_rich Low_complexity Low_complexity 1 30 0 5 1155 266 252 74 25 chr17 74739546 74739668 -20532983 - MIR SINE MIR -6 256 129 5 1155 898 109 13 20 chr17 74740089 74740239 -20532412 + B1_Mur3 SINE Alu 1 149 0 5 1155 219 189 337 0 chr17 74740699 74740794 -20531857 - B3 SINE B2 -86 130 4 5 1155 433 125 67 11 chr17 74740960 74741049 -20531602 - Lx9 LINE L1 -2 7642 7549 5 1155 180 0 0 0 chr17 74741095 74741115 -20531536 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 5 1155 971 125 0 0 chr17 74741116 74741252 -20531399 - B1_Mus1 SINE Alu -12 136 1 5 1155 454 286 17 0 chr17 74741633 74741752 -20530899 - RSINE1 SINE B4 0 165 45 5 1155 1017 217 108 25 chr17 74741768 74742047 -20530604 - ORR1D2 LTR MaLR -68 302 1 5 1155 579 219 0 17 chr17 74742074 74742190 -20530461 - B1_Mur2 SINE Alu -33 116 3 5 1155 362 226 27 81 chr17 74742395 74742506 -20530145 + PB1D7 SINE Alu 9 113 -7 5 1155 700 190 13 47 chr17 74742826 74742975 -20529676 + B1_Mus1 SINE Alu 5 148 0 5 1155 204 163 0 0 chr17 74742993 74743036 -20529615 + T-rich Low_complexity Low_complexity 1 43 0 5 1155 725 180 57 7 chr17 74743082 74743222 -20529429 - B1_Mus1 SINE Alu -1 147 1 5 1155 706 158 47 1 chr17 74743275 74743412 -20529239 - B1_Mur4 SINE Alu 0 148 1 5 1155 661 201 28 7 chr17 74743432 74743577 -20529074 - B3 SINE B2 -67 149 2 5 1155 195 69 0 0 chr17 74743580 74743609 -20529042 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 5 1155 1618 128 107 63 chr17 74743857 74744223 -20528428 - ORR1C2 LTR MaLR -2 382 1 5 1155 1585 27 38 0 chr17 74744375 74744561 -20528090 + B2_Mm1a SINE B2 1 193 0 5 1155 318 287 39 47 chr17 74744723 74744851 -20527800 - ID_B1 SINE B4 -7 217 91 5 1155 227 246 14 42 chr17 74744863 74744935 -20527716 - L1M5 LINE L1 -746 5433 5364 5 1155 316 155 0 17 chr17 74745097 74745156 -20527495 - B2_Mm2 SINE B2 -91 104 47 5 1155 1164 93 35 0 chr17 74745203 74745375 -20527276 - B2_Mm1t SINE B2 -14 179 2 5 1155 565 165 156 0 chr17 74745519 74745628 -20527023 + B1_Mus1 SINE Alu 23 148 0 5 1155 241 335 30 55 chr17 74745847 74746011 -20526640 + RSINE1 SINE B4 3 162 -3 5 1155 527 191 199 0 chr17 74746096 74746227 -20526424 + RSINE1 SINE B4 3 159 -6 5 1155 658 255 104 5 chr17 74746268 74746461 -20526190 - B3 SINE B2 -4 212 1 5 1155 186 118 0 0 chr17 74746472 74746506 -20526145 + (T)n Simple_repeat Simple_repeat 1 34 0 5 1155 1167 57 0 0 chr17 74746513 74746653 -20525998 - B1_Mus1 SINE Alu -7 141 2 5 1155 394 288 88 36 chr17 74746721 74746858 -20525793 + RSINE1 SINE B4 6 149 -16 5 1155 498 118 0 0 chr17 74746860 74746953 -20525698 + (TC)n Simple_repeat Simple_repeat 2 94 0 5 1155 207 0 0 0 chr17 74746953 74746976 -20525675 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 1155 32 26 0 0 chr17 74746979 74747018 -20525633 + AT_rich Low_complexity Low_complexity 1 39 0 5 1155 412 207 12 24 chr17 74747036 74747120 -20525531 + ID4_ SINE ID 1 83 0 5 1155 702 223 40 11 chr17 74747126 74747303 -20525348 + B3A SINE B2 1 182 -16 5 1155 21 0 0 0 chr17 74747318 74747339 -20525312 + AT_rich Low_complexity Low_complexity 1 21 0 5 1155 399 175 0 24 chr17 74747404 74747486 -20525165 - URR1B DNA MER1_type -36 189 110 5 1155 1248 27 0 33 chr17 74747529 74747666 -20524985 + B1_Mm SINE Alu 1 137 -10 5 1155 233 0 0 59 chr17 74747666 74747700 -20524951 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 5 1155 1248 27 0 33 chr17 74747700 74747714 -20524937 + B1_Mm SINE Alu 138 147 0 5 1155 484 298 57 0 chr17 74747760 74747901 -20524750 + RSINE1 SINE B4 15 163 -2 5 1155 247 299 15 0 chr17 74748191 74748258 -20524393 - ID4_ SINE ID -13 70 3 5 1155 1074 109 0 0 chr17 74748270 74748417 -20524234 - B1_Mus1 SINE Alu 0 148 2 5 1155 21 0 0 0 chr17 74748424 74748445 -20524206 + AT_rich Low_complexity Low_complexity 1 21 0 5 1155 804 231 41 5 chr17 74748450 74748646 -20524005 - B3 SINE B2 0 216 14 5 1155 244 266 67 40 chr17 74748669 74748770 -20523881 - ID4_ SINE ID -37 115 7 5 1155 524 319 0 0 chr17 74748840 74748981 -20523670 - RSINE1 SINE B4 -22 143 3 5 1155 562 255 78 10 chr17 74749077 74749283 -20523368 + B4A SINE B4 10 229 -63 5 1155 390 276 47 39 chr17 74749297 74749425 -20523226 + RSINE1 SINE B4 20 148 -17 5 1155 271 320 25 98 chr17 74749543 74749706 -20522945 + B4 SINE B4 73 223 -69 5 1155 681 160 29 37 chr17 74749572 74749708 -20522943 + B1_Mur2 SINE Alu 15 149 0 5 1155 293 271 14 0 chr17 74750062 74750132 -20522519 + ID_B1 SINE B4 154 224 0 5 1155 420 211 22 0 chr17 74750178 74750268 -20522383 - ID_B1 SINE B4 -11 213 122 5 1155 308 210 16 0 chr17 74750436 74750498 -20522153 + B1_Mus1 SINE Alu 40 102 -46 5 1155 766 50 0 0 chr17 74750655 74750755 -20521896 + B1_Mus1 SINE Alu 1 100 -48 5 1155 923 146 0 20 chr17 74750757 74750904 -20521747 + B1_Mus2 SINE Alu 4 147 0 5 1155 335 214 67 11 chr17 74750917 74751007 -20521644 + RSINE1 SINE B4 2 96 -69 5 1155 542 319 84 8 chr17 74751485 74751735 -20520916 - MER44B DNA MER2_type -264 286 18 5 1155 382 260 59 10 chr17 74752109 74752210 -20520441 + PB1D9 SINE Alu 14 119 -1 5 1155 1172 48 0 14 chr17 74752506 74752654 -20519997 - B1_Mus2 SINE Alu 0 147 2 5 1155 389 337 41 25 chr17 74752657 74752849 -20519802 - MIR SINE MIR -74 194 3 5 1155 206 289 0 0 chr17 74752849 74752894 -20519757 + polypyrimidine Low_complexity Low_complexity 5 49 0 5 1155 672 185 15 0 chr17 74752904 74753039 -20519612 - B1_Mus1 SINE Alu -6 142 6 5 1155 2994 63 63 0 chr17 74753045 74753441 -20519210 - BGLII LTR ERVK 0 421 1 5 1155 1297 159 9 18 chr17 74753481 74753699 -20518952 - B3 SINE B2 0 216 1 6 1155 293 195 0 68 chr17 74753888 74753907 -20518744 - ID_B1 SINE B4 -77 147 104 5 1155 311 118 0 0 chr17 74753907 74753958 -20518693 - B1_Mus2 SINE Alu -95 52 2 6 1155 830 174 0 14 chr17 74753990 74754130 -20518521 - B1_Mur1 SINE Alu -10 139 2 6 1155 366 264 131 7 chr17 74754555 74754700 -20517951 - RSINE1 SINE B4 -1 164 2 6 1155 319 343 10 0 chr17 74754849 74754951 -20517700 - PB1D10 SINE Alu -13 104 2 6 1155 395 237 168 8 chr17 74754973 74755092 -20517559 - B1F SINE Alu -7 142 5 6 1155 1416 78 10 10 chr17 74755100 74755294 -20517357 - B2_Mm2 SINE B2 0 195 2 6 1155 320 200 31 0 chr17 74755597 74755662 -20516989 + ID4_ SINE ID 15 81 -2 6 1155 771 128 66 22 chr17 74755707 74755843 -20516808 - B1_Mur4 SINE Alu -1 149 8 6 1155 650 206 58 7 chr17 74755982 74756119 -20516532 - B1_Mur2 SINE Alu -3 146 3 6 1155 594 220 38 8 chr17 74756217 74756350 -20516301 - B1_Mur3 SINE Alu -6 143 7 6 1155 312 222 0 0 chr17 74756508 74756571 -20516080 - ID4_ SINE ID -16 67 5 6 1155 325 231 38 25 chr17 74757133 74757213 -20515438 - ID4_ SINE ID -2 81 1 6 1155 560 215 99 0 chr17 74757923 74758044 -20514607 + B1_Mur2 SINE Alu 5 137 -12 6 1155 237 65 0 0 chr17 74758044 74758075 -20514576 + (TAA)n Simple_repeat Simple_repeat 1 31 0 6 1155 754 144 98 0 chr17 74758154 74758286 -20514365 + B1_Mus2 SINE Alu 1 145 -2 6 1155 1564 58 0 0 chr17 74758826 74759016 -20513635 - B2_Mm1a SINE B2 -3 190 1 6 1155 225 94 0 0 chr17 74759217 74759249 -20513402 + (TATG)n Simple_repeat Simple_repeat 4 35 0 6 1155 575 198 33 8 chr17 74759258 74759380 -20513271 - RSINE1 SINE B4 -32 133 9 6 1155 231 114 0 0 chr17 74759390 74759425 -20513226 + (TTG)n Simple_repeat Simple_repeat 2 36 0 6 1155 558 188 37 59 chr17 74759431 74759567 -20513084 - B1F2 SINE Alu 0 149 17 6 1155 634 202 39 0 chr17 74759588 74759717 -20512934 - B1_Mur1 SINE Alu -10 139 6 6 1155 207 200 0 0 chr17 74759768 74759803 -20512848 + polypyrimidine Low_complexity Low_complexity 3 37 0 6 1155 834 151 7 7 chr17 74759820 74759960 -20512691 - B1_Mm SINE Alu -6 141 2 6 1155 951 106 0 0 chr17 74760741 74760883 -20511768 + (TG)n Simple_repeat Simple_repeat 2 143 0 6 1155 362 230 10 20 chr17 74760967 74761069 -20511582 - B3 SINE B2 -108 108 8 6 1155 250 300 0 14 chr17 74761076 74761147 -20511504 - ID4 SINE ID -11 72 3 6 1155 435 100 0 0 chr17 74761960 74762030 -20510621 + (TG)n Simple_repeat Simple_repeat 2 71 0 6 1155 214 274 118 40 chr17 74762230 74762306 -20510345 + ID SINE ID 2 83 -141 6 1155 449 236 191 49 chr17 74762618 74762801 -20509850 + B3 SINE B2 2 210 -6 6 1155 219 217 0 0 chr17 74762871 74762931 -20509720 + C-rich Low_complexity Low_complexity 1 60 0 6 1155 396 215 118 0 chr17 74763124 74763217 -20509434 - ID_B1 SINE B4 -120 104 1 6 1155 1462 79 5 0 chr17 74763342 74763532 -20509119 - B2_Mm1t SINE B2 0 193 3 6 1155 810 204 7 0 chr17 74763535 74763682 -20508969 - B1_Mur3 SINE Alu 0 149 2 6 1155 216 0 0 0 chr17 74764140 74764164 -20508487 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 6 1155 1123 76 6 0 chr17 74764164 74764322 -20508329 - B2_Mm1a SINE B2 -33 160 2 6 1155 653 259 40 10 chr17 74764346 74764545 -20508106 - B3 SINE B2 -11 205 1 6 1155 587 229 151 0 chr17 74764582 74764761 -20507890 - B3 SINE B2 -10 206 1 6 1155 670 225 28 99 chr17 74764763 74764975 -20507676 - B3A SINE B2 0 198 2 6 1155 428 283 0 42 chr17 74765492 74765636 -20507015 - B1F2 SINE Alu -8 141 4 6 1155 785 210 0 20 chr17 74765636 74765782 -20506869 - B1_Mur3 SINE Alu -6 143 1 6 1155 567 224 13 39 chr17 74765786 74765939 -20506712 - B1F SINE Alu 0 149 1 6 1155 1181 75 0 0 chr17 74765993 74766139 -20506512 + B1_Mus2 SINE Alu 1 146 -1 6 1155 444 327 25 19 chr17 74766284 74766446 -20506205 + RSINE1 SINE B4 3 165 0 6 1155 22 0 0 0 chr17 74766453 74766475 -20506176 + AT_rich Low_complexity Low_complexity 1 22 0 6 1155 25 51 0 0 chr17 74766495 74766534 -20506117 + AT_rich Low_complexity Low_complexity 1 39 0 6 1155 809 180 28 17 chr17 74767010 74767191 -20505460 - B2_Mm2 SINE B2 -7 188 6 6 1155 345 331 91 58 chr17 74767402 74767678 -20504973 - B4A SINE B4 0 292 8 6 1155 341 302 183 13 chr17 74767826 74768061 -20504590 - B4A SINE B4 -14 278 4 6 1155 812 170 7 26 chr17 74769069 74769220 -20503431 + B1_Mur3 SINE Alu 2 149 0 6 1155 1178 55 0 7 chr17 74769433 74769580 -20503071 + B1_Mus1 SINE Alu 2 147 -1 6 1155 1312 98 38 0 chr17 74769876 74770060 -20502591 - B2_Mm2 SINE B2 -3 192 2 6 1155 248 301 21 11 chr17 74770085 74770179 -20502472 - PB1 SINE Alu -2 125 31 6 1155 286 264 99 9 chr17 74770516 74770627 -20502024 + ID_B1 SINE B4 79 199 -25 6 1155 489 189 113 0 chr17 74770529 74770635 -20502016 + B1_Mur1 SINE Alu 12 129 -20 6 1155 475 221 180 0 chr17 74771217 74771339 -20501312 + B1F2 SINE Alu 6 149 0 6 1155 528 305 49 95 chr17 74771876 74772140 -20500511 - MLT1C LTR MaLR -5 462 211 6 1155 234 325 117 0 chr17 74772162 74772282 -20500369 - MLT1C LTR MaLR -253 137 4 6 1155 463 130 13 0 chr17 74772431 74772508 -20500143 - B1_Mur4 SINE Alu 0 150 73 6 1155 413 196 469 0 chr17 74772770 74772913 -20499738 - B3 SINE B2 -6 210 1 6 1155 596 233 68 0 chr17 74773142 74773326 -20499325 - B3A SINE B2 -12 204 3 6 1155 813 117 36 21 chr17 74773559 74773699 -20498952 - B2_Mm1t SINE B2 -1 192 51 6 1155 723 211 7 20 chr17 74773699 74773849 -20498802 - B3 SINE B2 -67 149 2 6 1155 226 305 0 17 chr17 74774056 74774116 -20498535 + PB1D10 SINE Alu 22 80 -37 6 1155 816 204 43 104 chr17 74774570 74774800 -20497851 + B3 SINE B2 1 216 0 6 1155 687 174 61 0 chr17 74774844 74774976 -20497675 + B1_Mus1 SINE Alu 2 141 -7 6 1155 183 80 0 0 chr17 74774980 74775005 -20497646 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1155 294 293 87 75 chr17 74775015 74775231 -20497420 + L1ME1 LINE L1 5600 5830 -349 6 1155 399 232 0 0 chr17 74775231 74775313 -20497338 + ID4 SINE ID 2 83 0 6 1155 294 293 87 75 chr17 74775313 74775417 -20497234 + L1ME1 LINE L1 5831 5924 -255 6 1155 1087 189 14 32 chr17 74775434 74775653 -20496998 - B3 SINE B2 -1 215 1 6 1155 343 303 54 38 chr17 74775659 74775920 -20496731 + L1ME1 LINE L1 5914 6178 -1 6 1155 755 262 33 0 chr17 74775943 74776126 -20496525 + B3 SINE B2 27 215 -1 6 1155 8190 55 8 2 chr17 74776617 74778283 -20494368 - L1_Mus1 LINE L1 -2 6565 4892 6 1155 353 213 33 176 chr17 74778283 74778308 -20494343 + ID_B1 SINE B4 68 223 -1 6 1155 583 135 38 153 chr17 74778308 74778465 -20494186 + B1_Mur3 SINE Alu 11 149 0 6 1155 409 287 9 0 chr17 74778797 74778905 -20493746 + PB1D10 SINE Alu 1 109 -8 6 1155 940 97 0 7 chr17 74778947 74779093 -20493558 - B1_Mus2 SINE Alu 0 147 3 6 1155 414 254 7 56 chr17 74779200 74779342 -20493309 + B3 SINE B2 78 212 -4 6 1155 1153 35 35 0 chr17 74779352 74779494 -20493157 + B1_Mm SINE Alu 1 147 0 6 1155 581 226 64 18 chr17 74779922 74780093 -20492558 + B3 SINE B2 38 216 0 6 1155 1364 77 16 11 chr17 74780146 74780330 -20492321 + B2_Mm2 SINE B2 2 186 -9 6 1155 970 124 0 14 chr17 74780343 74780490 -20492161 + B1_Mus1 SINE Alu 3 147 -1 6 1155 1066 35 0 21 chr17 74780515 74780659 -20491992 - B1_Mus2 SINE Alu 0 147 7 6 1155 667 256 29 49 chr17 74780852 74781057 -20491594 + B3 SINE B2 5 205 -11 6 1155 597 273 26 7 chr17 74781456 74781607 -20491044 - B3 SINE B2 -6 210 57 6 1155 580 204 0 0 chr17 74781646 74781749 -20490902 + B3 SINE B2 1 103 -113 6 1155 287 310 0 0 chr17 74782003 74782074 -20490577 + B3A SINE B2 48 118 -80 6 1155 279 0 0 0 chr17 74782120 74782151 -20490500 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1155 1165 68 7 0 chr17 74782618 74782764 -20489887 - B1_Mus1 SINE Alu 0 148 2 6 1155 620 216 56 35 chr17 74782797 74782941 -20489710 - B1_Mm SINE Alu 0 147 1 6 1155 596 182 95 0 chr17 74783097 74783223 -20489428 + B1_Mur1 SINE Alu 6 143 -6 6 1155 678 284 24 9 chr17 74783229 74783442 -20489209 + B3 SINE B2 1 216 0 6 1155 492 306 78 48 chr17 74783724 74783930 -20488721 + B4A SINE B4 3 214 -78 6 1155 528 16 0 0 chr17 74784019 74784080 -20488571 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 1155 700 173 15 15 chr17 74784081 74784216 -20488435 + B1_Mur4 SINE Alu 16 150 0 6 1155 2711 125 135 24 chr17 74784415 74784956 -20487695 - Lx3C LINE L1 -592 6384 5784 6 1155 671 199 175 0 chr17 74784986 74785157 -20487494 + B3 SINE B2 1 201 -15 6 1155 438 69 0 0 chr17 74785161 74785219 -20487432 + (ATG)n Simple_repeat Simple_repeat 1 58 0 6 1155 768 138 20 80 chr17 74785353 74785503 -20487148 - B1_Mur3 SINE Alu -2 147 7 6 1155 253 250 118 0 chr17 74785572 74785640 -20487011 - ID4_ SINE ID -7 76 1 6 1155 537 253 188 0 chr17 74785730 74785900 -20486751 + B3 SINE B2 4 205 -11 6 1155 749 165 21 41 chr17 74786054 74786199 -20486452 - B1_Mur4 SINE Alu -7 143 2 6 1155 457 144 674 0 chr17 74787015 74787153 -20485498 - ORR1D1 LTR MaLR -122 252 22 7 1155 243 0 0 0 chr17 74787153 74787180 -20485471 + (CTATT)n Simple_repeat Simple_repeat 3 29 0 7 1155 28 0 0 0 chr17 74787378 74787406 -20485245 + AT_rich Low_complexity Low_complexity 1 28 0 7 1155 220 173 53 88 chr17 74789763 74789820 -20482831 - PB1D10 SINE Alu 0 117 63 7 1155 491 244 29 51 chr17 74789774 74789912 -20482739 - ID_B1 SINE B4 -6 218 84 7 1155 680 206 84 6 chr17 74791035 74791201 -20481450 - URR1B DNA MER1_type 0 225 47 7 1155 1411 84 16 5 chr17 74792539 74792731 -20479920 - B2_Mm2 SINE B2 0 195 2 7 1155 230 115 19 0 chr17 74792733 74792785 -20479866 + (TTTTTG)n Simple_repeat Simple_repeat 6 58 0 7 1155 745 144 0 96 chr17 74792785 74792931 -20479720 - B1_Mm SINE Alu 0 147 16 7 1155 637 255 6 18 chr17 74793059 74793223 -20479428 + B3A SINE B2 1 162 -36 7 1155 525 226 17 9 chr17 74793299 74793415 -20479236 - PB1D9 SINE Alu -2 118 2 7 1155 432 97 0 0 chr17 74794188 74794250 -20478401 + (CTCA)n Simple_repeat Simple_repeat 2 63 0 7 1155 251 331 80 32 chr17 74794431 74794556 -20478095 - B4A SINE B4 -135 157 27 7 1155 365 266 35 9 chr17 74795425 74795539 -20477112 + PB1D10 SINE Alu 1 117 0 7 1155 597 22 0 1 chr17 74795759 74795840 -20476811 + B1_Mm SINE Alu 65 142 -5 7 1155 23 0 0 0 chr17 74795849 74795872 -20476779 + AT_rich Low_complexity Low_complexity 1 23 0 7 1155 666 225 72 11 chr17 74795905 74796085 -20476566 - B3A SINE B2 -7 191 1 7 1155 774 277 9 0 chr17 74796095 74796308 -20476343 - B3 SINE B2 0 216 2 7 1155 849 124 29 0 chr17 74796387 74796524 -20476127 + B1_Mus1 SINE Alu 8 148 0 7 1155 270 0 0 0 chr17 74796524 74796554 -20476097 + (TG)n Simple_repeat Simple_repeat 2 31 0 7 1155 311 312 33 111 chr17 74796717 74796897 -20475754 - B4A SINE B4 -19 273 108 7 1155 425 36 0 0 chr17 74796985 74797041 -20475610 - L1_Mm LINE L1 -1680 4203 4148 7 1155 4618 24 28 2 chr17 74797041 74797582 -20475069 + L1Md_F2 LINE L1 6027 6581 -1 7 1155 306 67 0 0 chr17 74798192 74798237 -20474414 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 7 1155 285 164 0 52 chr17 74798263 74798321 -20474330 - B2_Mm2 SINE B2 -94 101 47 7 1155 1215 118 6 17 chr17 74798389 74798570 -20474081 - B2_Mm1a SINE B2 -14 179 1 7 1155 26 0 0 0 chr17 74798579 74798605 -20474046 + AT_rich Low_complexity Low_complexity 1 26 0 7 1155 296 258 29 67 chr17 74798605 74798709 -20473942 - PB1D10 SINE Alu -1 116 17 7 1155 962 196 116 0 chr17 74798799 74798988 -20473663 + B3 SINE B2 2 212 -4 7 1155 440 219 71 116 chr17 74798995 74799150 -20473501 + B1_Mur4 SINE Alu 3 150 0 7 1155 240 143 0 0 chr17 74799150 74799192 -20473459 + (A)n Simple_repeat Simple_repeat 1 42 0 7 1155 278 266 182 61 chr17 74799196 74799328 -20473323 - B4 SINE B4 -136 156 9 7 1155 443 221 135 15 chr17 74799646 74799779 -20472872 - B1F2 SINE Alu 0 149 1 7 1155 1293 115 22 44 chr17 74800055 74800282 -20472369 + URR1A DNA MER1_type 1 222 -4 7 1155 1553 52 11 0 chr17 74800410 74800601 -20472050 - B2_Mm1t SINE B2 0 193 1 7 1155 596 248 33 0 chr17 74801405 74801558 -20471093 + B3 SINE B2 1 158 -58 7 1155 205 327 167 0 chr17 74801660 74801810 -20470841 + L2a LINE L2 1247 1421 -1998 7 1155 396 0 0 0 chr17 74801815 74801859 -20470792 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 1155 351 217 58 0 chr17 74801861 74801930 -20470721 - RSINE1 SINE B4 -24 141 69 7 1155 363 284 64 12 chr17 74801980 74802151 -20470500 + L2a LINE L2 2295 2474 -945 7 1155 474 286 30 0 chr17 74802377 74802510 -20470141 - B1F SINE Alu -10 139 3 7 1155 966 104 0 7 chr17 74802779 74802914 -20469737 - B1_Mur4 SINE Alu -16 134 1 7 1155 202 232 274 24 chr17 74802914 74803077 -20469574 + L2a LINE L2 3205 3410 -16 7 1155 536 112 0 0 chr17 74803493 74803573 -20469078 + MTD LTR MaLR 1 80 -341 7 1155 1116 75 14 0 chr17 74803573 74803719 -20468932 + B1_Mus1 SINE Alu 1 148 0 7 1155 620 190 8 0 chr17 74803743 74803864 -20468787 + MTD LTR MaLR 68 189 -232 7 1155 376 256 37 0 chr17 74803861 74803943 -20468708 - RSINE1 SINE B4 -61 104 20 7 1155 889 88 0 0 chr17 74803975 74804100 -20468551 + B2_Mm2 SINE B2 1 125 -70 7 1155 373 136 220 33 chr17 74804238 74804329 -20468322 + B1_Mus2 SINE Alu 40 147 0 7 1155 195 42 0 0 chr17 74804357 74804381 -20468270 + (GAAA)n Simple_repeat Simple_repeat 4 27 0 7 1155 213 121 0 0 chr17 74804390 74804423 -20468228 + (CAGG)n Simple_repeat Simple_repeat 1 33 0 7 1155 862 172 104 5 chr17 74804427 74804620 -20468031 + MTD LTR MaLR 200 411 -8 7 1155 1267 79 16 22 chr17 74804624 74804806 -20467845 + B2_Mm2 SINE B2 1 181 -14 7 1155 304 325 74 68 chr17 74804809 74804971 -20467680 + B3 SINE B2 25 187 -29 7 1155 771 94 16 8 chr17 74805193 74805321 -20467330 + B1_Mur3 SINE Alu 21 149 0 7 1155 269 323 73 57 chr17 74805496 74805673 -20466978 + B3A SINE B2 1 180 -18 7 1155 687 296 40 59 chr17 74805761 74806034 -20466617 + Tigger7 DNA MER2_type 35 302 -2189 7 1155 853 233 123 52 chr17 74806063 74806371 -20466280 + MTB_Mm LTR MaLR 5 334 -73 7 1155 218 274 15 61 chr17 74806394 74806460 -20466191 + B3A SINE B2 68 130 -68 7 1155 584 107 316 18 chr17 74806784 74806898 -20465753 + B1_Mus1 SINE Alu 1 148 0 7 1155 1533 48 0 41 chr17 74806918 74807115 -20465536 + B2_Mm1a SINE B2 1 189 -4 7 1155 23 0 0 0 chr17 74807233 74807256 -20465395 + AT_rich Low_complexity Low_complexity 1 23 0 7 1155 1217 121 5 11 chr17 74807510 74807694 -20464957 - B2_Mm1a SINE B2 -9 184 2 7 1155 432 322 0 0 chr17 74807784 74807961 -20464690 + C-rich Low_complexity Low_complexity 1 177 0 7 1155 233 330 0 0 chr17 74807974 74808080 -20464571 + C-rich Low_complexity Low_complexity 1 106 0 7 1155 233 279 12 60 chr17 74808749 74808833 -20463818 - ID4_ SINE ID -1 82 3 7 1155 1151 55 7 0 chr17 74808926 74809071 -20463580 - B1_Mus2 SINE Alu 0 147 2 7 1155 261 0 0 0 chr17 74809918 74809947 -20462704 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 7 1155 1295 106 21 0 chr17 74809997 74810185 -20462466 - B2_Mm1t SINE B2 0 193 2 7 1155 604 187 16 16 chr17 74810185 74810301 -20462350 - B1_Mus2 SINE Alu -30 117 3 7 1155 573 229 43 7 chr17 74810430 74810571 -20462080 + B1F1 SINE Alu 3 148 -1 7 1155 286 321 114 0 chr17 74810874 74811052 -20461599 - MIR SINE MIR -59 203 1 7 1155 988 37 44 0 chr17 74811110 74811245 -20461406 + B1_Mus1 SINE Alu 8 148 0 7 1155 236 196 87 0 chr17 74811293 74811339 -20461312 - RSINE1 SINE B4 -35 130 81 7 1155 225 240 0 0 chr17 74812997 74813047 -20459604 - L1MB3 LINE L1 -42 6141 6092 7 1155 435 256 184 0 chr17 74813042 74813210 -20459441 - L1MB3 LINE L1 -322 5861 5663 7 1155 1032 212 14 5 chr17 74813744 74813957 -20458694 - B3 SINE B2 0 216 2 7 1155 232 302 81 0 chr17 74814072 74814158 -20458493 - ID_B1 SINE B4 -19 205 113 7 1155 947 135 13 13 chr17 74814388 74814538 -20458113 - B1_Mur4 SINE Alu 0 150 1 7 1155 342 0 0 0 chr17 74814808 74814846 -20457805 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 1155 261 0 0 0 chr17 74815501 74815530 -20457121 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 7 1155 1053 66 0 42 chr17 74815530 74815673 -20456978 - B1_Mus1 SINE Alu -10 138 2 7 1155 202 73 0 47 chr17 74815779 74815822 -20456829 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 7 1155 270 128 0 0 chr17 74815823 74815870 -20456781 - B1F SINE Alu 0 149 103 7 1155 539 305 28 0 chr17 74815926 74816103 -20456548 - B3 SINE B2 -8 208 27 7 1155 432 200 22 0 chr17 74816125 74816215 -20456436 - B1_Mur2 SINE Alu -5 144 53 7 1155 5651 166 41 68 chr17 74816409 74817767 -20454884 + RMER12 LTR ERVK 1 1322 0 7 1155 23 0 0 0 chr17 74817935 74817958 -20454693 + AT_rich Low_complexity Low_complexity 1 23 0 7 1155 498 185 243 7 chr17 74819026 74819178 -20453473 + B3 SINE B2 29 216 0 7 1155 444 175 215 0 chr17 74819202 74819379 -20453272 + B3 SINE B2 1 215 -1 7 1155 441 0 0 0 chr17 74819497 74819546 -20453105 + (TTG)n Simple_repeat Simple_repeat 3 51 0 7 1155 681 131 49 0 chr17 74819799 74819921 -20452730 - B1_Mur2 SINE Alu -1 148 21 7 1155 664 118 8 8 chr17 74820536 74820664 -20451987 + (TATG)n Simple_repeat Simple_repeat 4 131 0 7 1155 302 321 0 13 chr17 74820665 74820744 -20451907 - ID4 SINE ID -5 78 1 7 1155 625 184 0 9 chr17 74820908 74821023 -20451628 + B1_Mur1 SINE Alu 29 142 -7 7 1155 330 243 27 0 chr17 74821082 74821156 -20451495 - L1M5 LINE L1 -518 5606 5531 7 1155 425 66 16 0 chr17 74821162 74821223 -20451428 + (TG)n Simple_repeat Simple_repeat 1 62 0 7 1155 897 71 8 0 chr17 74821285 74821411 -20451240 - B1_Mus1 SINE Alu -21 127 1 7 1155 273 233 0 15 chr17 74821303 74821434 -20451217 - ORR1B1-int LTR MaLR -755 754 626 7 1155 288 179 29 29 chr17 74821447 74821516 -20451135 - PB1D7 SINE Alu -10 110 42 7 1155 363 195 26 13 chr17 74821545 74821701 -20450950 + CT-rich Low_complexity Low_complexity 6 163 0 7 1155 230 214 18 0 chr17 74821732 74821788 -20450863 - B1_Mus2 SINE Alu -89 58 2 7 1155 754 144 42 28 chr17 74822160 74822303 -20450348 + B1_Mur4 SINE Alu 5 149 -1 7 1155 433 254 24 44 chr17 74823350 74823496 -20449155 - PB1D10 SINE Alu -8 141 10 7 1155 1230 41 0 0 chr17 74825092 74825239 -20447412 + B1_Mus2 SINE Alu 1 147 0 7 1155 204 40 0 0 chr17 74825239 74825264 -20447387 + (A)n Simple_repeat Simple_repeat 1 25 0 7 1155 294 224 0 15 chr17 74825443 74825511 -20447140 + RSINE1 SINE B4 95 161 -4 8 1155 1085 137 164 0 chr17 74825929 74826112 -20446539 - B3 SINE B2 -3 213 1 8 1155 2152 143 17 44 chr17 74826805 74827214 -20445437 + RMER10B LTR ERVL 1 398 0 8 1155 1002 131 200 0 chr17 74827449 74827624 -20445027 + B3 SINE B2 1 210 -6 8 1155 402 21 0 0 chr17 74827728 74827775 -20444876 + (CA)n Simple_repeat Simple_repeat 1 47 0 8 1155 236 53 0 26 chr17 74827870 74827909 -20444742 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 8 1155 261 281 0 0 chr17 74827912 74827976 -20444675 - PB1D7 SINE Alu -14 106 43 8 1155 201 167 0 0 chr17 74828128 74828164 -20444487 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 8 1155 446 160 262 9 chr17 74828165 74828272 -20444379 - B1_Mus1 SINE Alu -2 146 13 8 1155 472 154 28 19 chr17 74828355 74828437 -20444214 + PB1D10 SINE Alu 11 91 -26 8 1155 4045 111 124 23 chr17 74828437 74829122 -20443529 + RMER6A LTR ERVK 1 754 -2 8 1155 472 154 28 19 chr17 74829122 74829145 -20443506 + PB1D10 SINE Alu 92 116 -1 8 1155 327 283 113 113 chr17 74829950 74830181 -20442470 + MLT1J LTR MaLR 113 343 -169 8 1155 426 272 155 42 chr17 74830835 74830882 -20441769 + MTE2b LTR MaLR 10 59 -320 8 1155 402 74 0 0 chr17 74830882 74830936 -20441715 + (TG)n Simple_repeat Simple_repeat 1 54 0 8 1155 426 272 155 42 chr17 74830936 74831153 -20441498 + MTE2b LTR MaLR 60 304 -75 8 1155 526 242 54 112 chr17 74831512 74831618 -20441033 + B3 SINE B2 24 119 -97 8 1155 799 161 230 0 chr17 74831618 74831779 -20440872 - B3 SINE B2 -14 202 5 8 1155 526 242 54 112 chr17 74831779 74831877 -20440774 + B3 SINE B2 120 216 0 8 1155 231 191 0 0 chr17 74832056 74832103 -20440548 - MLT1A0 LTR MaLR -25 340 294 8 1155 596 227 156 52 chr17 74832275 74832545 -20440106 + RMER10A LTR ERVL 1 298 -144 8 1155 572 184 37 63 chr17 74832568 74832759 -20439892 + RMER10A LTR ERVL 252 437 -5 8 1155 229 178 0 0 chr17 74832970 74833015 -20439636 - PB1D9 SINE Alu -55 65 21 8 1155 2623 37 3 12 chr17 74833564 74833890 -20438761 + L1Md_F2 LINE L1 6260 6582 0 8 1155 366 231 110 9 chr17 74833924 74834033 -20438618 + PB1D9 SINE Alu 1 120 0 8 1155 219 36 0 0 chr17 74834105 74834133 -20438518 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 8 1155 1010 111 108 28 chr17 74834137 74834313 -20438338 - B2_Mm2 SINE B2 -5 190 1 8 1155 25 31 0 0 chr17 74834361 74834393 -20438258 + AT_rich Low_complexity Low_complexity 1 32 0 8 1155 1216 61 0 0 chr17 74834397 74834544 -20438107 + B1_Mus2 SINE Alu 1 147 0 8 1155 527 209 45 0 chr17 74834591 74834701 -20437950 - B1_Mur1 SINE Alu -34 115 1 8 1155 351 234 159 0 chr17 74834954 74835061 -20437590 + B1F2 SINE Alu 26 149 0 8 1155 28 0 0 0 chr17 74835061 74835089 -20437562 + AT_rich Low_complexity Low_complexity 1 28 0 8 1155 1229 41 0 0 chr17 74835160 74835307 -20437344 + B1_Mus2 SINE Alu 1 147 0 8 1155 278 279 115 0 chr17 74835716 74835820 -20436831 - PB1D9 SINE Alu -2 118 3 8 1155 592 193 105 0 chr17 74835893 74836007 -20436644 - B3 SINE B2 -90 126 1 8 1155 909 57 0 0 chr17 74836393 74836516 -20436135 + B1_Mus1 SINE Alu 26 148 0 8 1155 198 0 0 0 chr17 74836979 74837001 -20435650 + (T)n Simple_repeat Simple_repeat 1 22 0 8 1155 189 0 0 0 chr17 74837544 74837565 -20435086 + (T)n Simple_repeat Simple_repeat 1 21 0 8 1155 288 224 15 15 chr17 74838006 74838074 -20434577 - ID4_ SINE ID -8 75 8 8 1155 21 0 0 0 chr17 74838476 74838497 -20434154 + AT_rich Low_complexity Low_complexity 1 21 0 8 1155 298 321 47 0 chr17 74838507 74838613 -20434038 - RSINE1 SINE B4 0 165 55 8 1155 1697 31 0 0 chr17 74838639 74838831 -20433820 - B2_Mm1t SINE B2 0 193 2 8 1155 201 147 0 0 chr17 74838861 74838895 -20433756 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 8 1155 347 292 36 56 chr17 74838910 74839106 -20433545 - RLTR23 LTR ERV1 0 430 239 8 1155 354 217 11 57 chr17 74839136 74839224 -20433427 - B1_Mur3 SINE Alu -64 85 2 8 1155 429 292 0 0 chr17 74839238 74839344 -20433307 - ID_B1 SINE B4 -2 222 117 8 1155 1169 54 0 7 chr17 74839411 74839560 -20433091 - B1_Mus1 SINE Alu 0 148 1 8 1155 202 333 43 9 chr17 74839606 74839721 -20432930 + MIR3 SINE MIR 85 203 -5 8 1155 273 345 68 68 chr17 74840261 74840497 -20432154 + B4A SINE B4 1 236 -56 8 1155 2058 157 18 62 chr17 74840518 74840726 -20431925 - ORR1C2 LTR MaLR 0 384 175 8 1155 1170 42 0 14 chr17 74840726 74840871 -20431780 + B1_Mm SINE Alu 5 147 0 8 1155 2058 157 18 62 chr17 74840871 74840887 -20431764 - ORR1C2 LTR MaLR -210 174 174 8 1155 189 0 0 0 chr17 74840887 74840908 -20431743 + (GA)n Simple_repeat Simple_repeat 2 22 0 8 1155 2058 157 18 62 chr17 74840908 74841083 -20431568 - ORR1C2 LTR MaLR -210 174 2 8 1155 3280 56 2 2 chr17 74841454 74841850 -20430801 + MTA_Mm LTR MaLR 1 396 0 8 144 8490 56 31 2 chr17 74841850 74842917 -20429734 + MTA_Mm-int LTR MaLR 1 1098 0 8 1156 3220 55 0 8 chr17 74842917 74843316 -20429335 + MTA_Mm LTR MaLR 1 396 0 8 1156 244 302 50 75 chr17 74843517 74843678 -20428973 + RLTR18 LTR ERVK 459 615 -1 8 1156 773 179 247 6 chr17 74843711 74843885 -20428766 + B3 SINE B2 1 216 0 8 1156 386 221 42 1 chr17 74843975 74844085 -20428566 + B1F SINE Alu 1 113 -7 8 1156 377 242 8 0 chr17 74844091 74844219 -20428432 + GA-rich Low_complexity Low_complexity 3 131 0 8 1156 660 188 8 8 chr17 74847826 74847955 -20424696 + B1_Mur2 SINE Alu 2 130 -19 8 1156 263 316 0 0 chr17 74847964 74848040 -20424611 + G-rich Low_complexity Low_complexity 6 81 0 8 1156 5050 163 49 9 chr17 74848665 74849538 -20423113 + RMER13B LTR ERVK 1 908 0 8 1156 315 71 0 0 chr17 74849916 74849958 -20422693 + (GTTTG)n Simple_repeat Simple_repeat 5 46 0 8 1156 310 250 0 38 chr17 74850490 74850547 -20422104 + B1_Mus2 SINE Alu 72 128 -19 8 1156 1475 73 5 16 chr17 74850547 74850741 -20421910 - B2_Mm1a SINE B2 -1 192 1 8 1156 310 250 0 38 chr17 74850741 74850762 -20421889 + B1_Mus2 SINE Alu 129 147 0 8 1156 857 163 0 20 chr17 74851000 74851150 -20421501 - B1_Mur3 SINE Alu -1 148 2 8 1156 316 241 0 33 chr17 74851571 74851661 -20420990 + MER3 DNA MER1_type 123 209 0 8 1156 2850 47 12 0 chr17 74851915 74852257 -20420394 + ORR1A1 LTR MaLR 1 346 0 8 1156 397 269 139 38 chr17 74852567 74852765 -20419886 + B4A SINE B4 38 272 -20 8 1156 243 0 0 0 chr17 74852770 74852797 -20419854 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 1156 297 0 0 0 chr17 74852797 74852829 -20419822 + (GA)n Simple_repeat Simple_repeat 2 34 0 8 1156 1112 63 28 0 chr17 74853164 74853307 -20419344 + B1_Mus2 SINE Alu 1 147 0 8 1156 638 304 82 83 chr17 74853442 74853912 -20418739 - RLTR26 LTR ERVK -154 488 1 8 1156 1125 120 68 5 chr17 74853921 74854113 -20418538 + ORR1C1 LTR MaLR 173 376 -2 8 1156 186 118 0 0 chr17 74854335 74854369 -20418282 + (T)n Simple_repeat Simple_repeat 1 34 0 8 1156 1136 96 0 0 chr17 74854369 74854515 -20418136 - B1_Mus2 SINE Alu 0 147 2 8 1156 399 256 206 22 chr17 74854581 74854761 -20417890 + B3 SINE B2 4 216 0 8 1156 2049 221 53 86 chr17 74854776 74855271 -20417380 + RLTR26 LTR ERVK 1 496 -146 8 1156 621 0 0 0 chr17 74855271 74855340 -20417311 + (TTTTG)n Simple_repeat Simple_repeat 3 71 0 8 1156 2049 221 53 86 chr17 74855340 74855508 -20417143 + RLTR26 LTR ERVK 497 642 0 8 1156 1644 209 96 74 chr17 74855508 74856010 -20416641 + Lx9 LINE L1 7125 7637 -7 8 1156 2240 94 21 59 chr17 74856056 74856394 -20416257 - ORR1A2 LTR MaLR 0 327 3 8 1156 237 297 13 39 chr17 74856395 74856472 -20416179 + B2_Mm2 SINE B2 37 111 -84 8 1156 318 183 0 0 chr17 74856482 74856553 -20416098 + (CA)n Simple_repeat Simple_repeat 1 71 0 8 1156 942 63 0 8 chr17 74856623 74856751 -20415900 + B1_Mus1 SINE Alu 15 141 -7 8 1156 456 19 0 0 chr17 74856755 74856808 -20415843 + (CATA)n Simple_repeat Simple_repeat 2 54 0 8 1156 511 307 0 0 chr17 74856958 74857098 -20415553 - B1F SINE Alu -9 140 1 8 1156 246 81 0 0 chr17 74857262 74857299 -20415352 + (TGGG)n Simple_repeat Simple_repeat 1 37 0 8 1156 621 257 7 0 chr17 74857300 74857452 -20415199 - RSINE1 SINE B4 -11 154 2 8 1156 1432 49 5 42 chr17 74858617 74858809 -20413842 + B2_Mm2 SINE B2 1 185 -10 8 1156 468 51 0 0 chr17 74858950 74859009 -20413642 + (TG)n Simple_repeat Simple_repeat 2 60 0 8 1156 601 217 21 21 chr17 74859016 74859157 -20413494 - B1_Mur2 SINE Alu 0 149 9 8 1156 593 281 86 41 chr17 74859159 74859404 -20413247 - RMER5 LTR ERV1 -131 403 148 8 1156 1351 78 55 11 chr17 74859414 74859596 -20413055 + B2_Mm2 SINE B2 1 190 -5 8 1156 241 291 93 0 chr17 74859659 74859745 -20412906 - PB1D10 SINE Alu -18 99 6 8 1156 310 237 54 64 chr17 74859680 74859775 -20412876 - ID_B1 SINE B4 -69 155 65 8 1156 543 210 8 46 chr17 74860217 74860347 -20412304 + B1_Mur2 SINE Alu 24 148 -1 8 1156 842 131 35 125 chr17 74860449 74860559 -20412092 + URR1A DNA MER1_type 1 93 -133 8 1156 1305 46 91 0 chr17 74860559 74860734 -20411917 - B2_Mm1t SINE B2 -2 191 1 8 1156 842 131 35 125 chr17 74860734 74860823 -20411828 + URR1A DNA MER1_type 94 182 -44 8 1156 310 224 16 57 chr17 74860823 74860857 -20411794 - CYRA11_Mm Unknown Y-chromosome -313 304 187 8 1156 1221 48 0 0 chr17 74860977 74861123 -20411528 + B1_Mm SINE Alu 2 147 0 8 1156 21 0 0 0 chr17 74861123 74861144 -20411507 + AT_rich Low_complexity Low_complexity 1 21 0 8 1156 3052 168 70 53 chr17 74861144 74862160 -20410491 + RLTR13D1 LTR ERVK 1 1004 -19 8 1156 255 157 0 0 chr17 74862221 74862272 -20410379 + (TATG)n Simple_repeat Simple_repeat 3 53 0 8 1156 1025 237 19 0 chr17 74862301 74862512 -20410139 - B3 SINE B2 0 216 2 8 1156 213 111 0 0 chr17 74862540 74862576 -20410075 + PB1D10 SINE Alu 82 117 0 8 1156 217 238 24 0 chr17 74862858 74862942 -20409709 + A-rich Low_complexity Low_complexity 5 90 0 9 1156 210 289 0 100 chr17 74862958 74863058 -20409593 + MIR SINE MIR 14 103 -165 9 1156 422 212 0 0 chr17 74863131 74863216 -20409435 - RLTR20D LTR ERVK -483 85 1 9 1156 1453 74 11 0 chr17 74863254 74863444 -20409207 + B2_Mm1t SINE B2 2 193 0 9 1156 2695 124 82 12 chr17 74863505 74863993 -20408658 - MYSERV16_I-int LTR ERVK -22 2304 1783 9 1156 335 133 274 53 chr17 74863990 74864085 -20408566 - MYSERV16_I-int LTR ERVK -665 1661 1546 9 1156 1197 28 35 0 chr17 74864085 74864227 -20408424 + B1_Mus2 SINE Alu 1 147 0 9 1156 425 178 25 101 chr17 74864291 74864410 -20408241 + MT2B LTR ERVL 155 264 -337 9 1156 1100 42 0 0 chr17 74864303 74864445 -20408206 + B1_Mus2 SINE Alu 6 147 0 9 1156 2602 96 49 9 chr17 74864454 74864884 -20407767 - MYSERV16_I-int LTR ERVK -818 1508 1062 9 1156 3068 200 113 69 chr17 74864867 74865354 -20407297 - MYSERV16_I-int LTR ERVK -1378 948 421 9 1156 1174 55 0 7 chr17 74865354 74865500 -20407151 + B1_Mus2 SINE Alu 2 146 -1 9 1156 3068 200 113 69 chr17 74865500 74865553 -20407098 - MYSERV16_I-int LTR ERVK -1906 420 377 9 1156 1484 63 16 0 chr17 74865553 74865744 -20406907 - B2_Mm2 SINE B2 0 195 2 9 1156 3068 200 113 69 chr17 74865744 74865915 -20406736 - MYSERV16_I-int LTR ERVK -1950 376 209 9 1156 1250 27 0 0 chr17 74865915 74866061 -20406590 - B1_Mus2 SINE Alu 0 147 2 9 1156 3068 199 74 48 chr17 74866061 74866380 -20406271 - MYSERV16_I-int LTR ERVK -2118 208 3 9 1156 969 95 0 13 chr17 74866486 74866635 -20406016 - BGLII LTR ERVK 0 421 275 9 1156 563 115 62 0 chr17 74866623 74866719 -20405932 + ORR1A2 LTR MaLR 226 327 0 9 1156 4979 127 31 38 chr17 74866719 74867106 -20405545 + ORR1A2-int LTR MaLR 1 391 -867 9 1156 1690 21 0 10 chr17 74867106 74867299 -20405352 + B2_Mm1a SINE B2 3 193 0 9 1156 4979 127 31 38 chr17 74867299 74867833 -20404818 + ORR1A2-int LTR MaLR 392 916 -342 9 1156 2578 247 24 39 chr17 74867836 74868498 -20404153 + RodERV21-int LTR ERV1 2067 2718 -2273 9 1156 407 283 24 67 chr17 74868667 74868921 -20403730 + RodERV21-int LTR ERV1 3639 3881 -3210 9 1156 301 335 18 42 chr17 74868999 74869167 -20403484 + RodERV21-int LTR ERV1 3276 3439 -1552 9 1156 545 79 0 26 chr17 74869174 74869252 -20403399 - ETnERV2-int LTR ERVK 0 7406 7331 9 1156 18514 99 29 28 chr17 74869467 74872156 -20400495 - ETnERV2-int LTR ERVK -984 6422 3733 9 1156 1146 67 211 0 chr17 74872169 74872377 -20400274 - RLTR10A LTR ERVK -43 368 117 9 1156 3189 75 14 16 chr17 74872450 74872894 -20399757 - RLTR10-int LTR ERVK -242 1745 1303 9 1156 1224 93 187 0 chr17 74873046 74873228 -20399423 - RLTR10-int LTR ERVK -199 6343 6128 9 1156 1036 64 292 0 chr17 74873231 74873428 -20399223 - RLTR10-int LTR ERVK -521 6021 5766 9 1156 1238 68 315 0 chr17 74873426 74873740 -20398911 - RLTR10-int LTR ERVK -1142 5400 4988 9 1156 2042 153 8 34 chr17 74873725 74874200 -20398451 - RLTR10-int LTR ERVK -1385 602 295 9 1156 613 88 11 0 chr17 74874202 74874293 -20398358 - RLTR10A LTR ERVK 0 411 320 9 1156 1308 109 77 30 chr17 74874295 74874533 -20398118 - ETnERV2-int LTR ERVK -3751 3655 3441 9 1156 1139 128 313 22 chr17 74874549 74874866 -20397785 - ETnERV2-int LTR ERVK -4419 2987 2579 9 1156 1740 91 4 0 chr17 74874881 74875135 -20397516 + MTB_Mm LTR MaLR 153 407 0 9 1156 1246 27 7 0 chr17 74875201 74875347 -20397304 + B1_Mus2 SINE Alu 1 147 0 9 1156 277 139 0 0 chr17 74875728 74875771 -20396880 - RLTR20D LTR ERVK -1 567 525 9 1156 1302 173 188 14 chr17 74875763 74876056 -20396595 + RLTR20D LTR ERVK 225 568 0 9 1156 3685 72 41 92 chr17 74876131 74876463 -20396188 - L1_Mur2 LINE L1 -3958 1919 1573 9 1156 1422 73 21 5 chr17 74876463 74876655 -20395996 - B2_Mm2 SINE B2 0 195 1 9 1156 3685 72 41 92 chr17 74876655 74876735 -20395916 - L1_Mur2 LINE L1 -4305 1572 1501 9 1156 198 0 0 0 chr17 74876735 74876757 -20395894 + (TTA)n Simple_repeat Simple_repeat 2 23 0 9 1156 1113 78 14 0 chr17 74876767 74876909 -20395742 - B1_Mus1 SINE Alu 0 148 5 9 1156 3685 72 41 92 chr17 74876909 74877046 -20395605 - L1_Mur2 LINE L1 -4377 1500 1374 9 1156 182 62 31 0 chr17 74877046 74877078 -20395573 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 9 1156 1123 51 15 0 chr17 74877078 74877215 -20395436 - B1_Mm SINE Alu -8 139 1 9 1156 3685 72 41 92 chr17 74877215 74877290 -20395361 - L1_Mur2 LINE L1 -4504 1373 1315 9 1156 8409 115 98 10 chr17 74877292 74878786 -20393865 + Lx4A LINE L1 5458 7057 -1 9 1156 23 0 0 0 chr17 74878786 74878809 -20393842 + AT_rich Low_complexity Low_complexity 1 23 0 9 1156 759 208 0 0 chr17 74878832 74878844 -20393807 + A-rich Low_complexity Low_complexity 1 12 0 9 1156 1191 74 0 0 chr17 74878844 74878992 -20393659 + B1_Mus1 SINE Alu 1 148 0 9 1156 759 208 0 0 chr17 74878992 74879157 -20393494 + A-rich Low_complexity Low_complexity 13 177 0 9 1156 294 263 53 0 chr17 74879165 74879241 -20393410 + ID4_ SINE ID 2 81 -2 9 1156 685 256 85 6 chr17 74879297 74879474 -20393177 + B3 SINE B2 1 191 -25 9 1156 2102 84 183 0 chr17 74879481 74879825 -20392826 + RLTR33 LTR ERVK 190 596 -82 9 1156 1732 232 62 30 chr17 74879821 74880318 -20392333 + RLTR17 LTR ERVK 98 610 -82 9 1156 577 125 0 0 chr17 74880363 74880451 -20392200 + RLTR33 LTR ERVK 591 678 0 9 1156 256 211 0 0 chr17 74880454 74880506 -20392145 + B4A SINE B4 183 234 -58 9 1156 475 252 52 0 chr17 74880514 74880629 -20392022 + B1_Mur1 SINE Alu 14 134 -15 9 1156 243 0 0 0 chr17 74880675 74880702 -20391949 + (CA)n Simple_repeat Simple_repeat 2 28 0 9 1156 22 0 0 0 chr17 74880827 74880849 -20391802 + AT_rich Low_complexity Low_complexity 1 22 0 9 1156 336 256 13 0 chr17 74881048 74881126 -20391525 + B3A SINE B2 2 80 -118 9 1156 484 225 41 61 chr17 74881360 74881507 -20391144 + B1F1 SINE Alu 1 144 -5 9 1156 1132 96 22 157 chr17 74881546 74881589 -20391062 + B2_Mm1t SINE B2 1 34 -159 9 1156 1252 34 0 0 chr17 74881589 74881736 -20390915 + B1_Mus2 SINE Alu 1 147 0 9 1156 1132 96 22 157 chr17 74881736 74881915 -20390736 + B2_Mm1t SINE B2 35 193 0 9 1156 856 159 0 33 chr17 74881992 74882142 -20390509 - B1_Mur1 SINE Alu -1 148 4 9 1156 1338 76 38 0 chr17 74882271 74882455 -20390196 - B2_Mm1a SINE B2 -1 192 2 9 1156 1179 230 20 20 chr17 74882734 74882992 -20389659 + RMER10A LTR ERVL 1 258 -184 9 1156 180 0 0 0 chr17 74882992 74883012 -20389639 + (TCTG)n Simple_repeat Simple_repeat 1 20 0 9 1156 1179 230 20 20 chr17 74883012 74883050 -20389601 + RMER10A LTR ERVL 259 297 -145 9 1156 563 204 176 10 chr17 74883041 74883134 -20389517 + RMER10A LTR ERVL 216 332 -110 9 1156 180 0 0 0 chr17 74883134 74883154 -20389497 + (G)n Simple_repeat Simple_repeat 1 20 0 9 1156 563 204 176 10 chr17 74883154 74883253 -20389398 + RMER10A LTR ERVL 333 439 -3 9 1156 264 77 0 0 chr17 74883648 74883687 -20388964 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 9 1156 825 167 0 53 chr17 74883692 74883844 -20388807 - B1_Mur4 SINE Alu -2 148 5 9 1156 1883 191 62 30 chr17 74883848 74883920 -20388731 + MTC LTR MaLR 1 77 -344 9 1156 1531 63 5 0 chr17 74883920 74884110 -20388541 + B2_Mm1a SINE B2 2 192 -1 9 1156 1883 191 62 30 chr17 74884110 74884437 -20388214 + MTC LTR MaLR 78 413 -8 9 1156 512 273 0 40 chr17 74884471 74884620 -20388031 - B3A SINE B2 -54 144 2 9 1156 812 261 22 35 chr17 74884672 74884898 -20387753 + ID_B1 SINE B4 2 224 0 9 1156 622 156 46 0 chr17 74884918 74885027 -20387624 + B1_Mus2 SINE Alu 17 130 -17 9 1156 849 71 0 0 chr17 74885044 74885157 -20387494 + (GAAA)n Simple_repeat Simple_repeat 2 114 0 9 1156 1134 84 0 0 chr17 74885157 74885299 -20387352 + B1_Mus2 SINE Alu 2 143 -4 9 1156 452 153 12 0 chr17 74885303 74885388 -20387263 + GA-rich Low_complexity Low_complexity 3 88 0 9 1156 443 252 10 0 chr17 74885540 74885643 -20387008 + B1_Mur1 SINE Alu 38 141 -8 9 1156 328 250 164 0 chr17 74885806 74885910 -20386741 - B1_Mur1 SINE Alu -17 132 12 9 1156 657 306 0 0 chr17 74886280 74886453 -20386198 + B3A SINE B2 1 173 -25 9 1156 297 0 0 0 chr17 74886509 74886542 -20386109 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 9 1156 225 0 0 0 chr17 74887403 74887428 -20385223 + (A)n Simple_repeat Simple_repeat 1 25 0 9 1156 623 250 53 53 chr17 74887747 74887937 -20384714 + B3A SINE B2 5 194 -4 9 1156 1241 130 5 15 chr17 74887939 74888135 -20384516 + B2_Mm2 SINE B2 2 195 0 9 1156 230 0 33 0 chr17 74888465 74888495 -20384156 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 1156 22 0 0 0 chr17 74889477 74889499 -20383152 + AT_rich Low_complexity Low_complexity 1 22 0 9 1156 220 216 0 0 chr17 74889671 74889722 -20382929 + A-rich Low_complexity Low_complexity 1 51 0 9 1156 544 261 14 28 chr17 74889885 74890027 -20382624 + B1_Mur1 SINE Alu 10 149 0 9 1156 1242 41 0 0 chr17 74890097 74890244 -20382407 - B1_Mus2 SINE Alu 0 147 1 9 1156 414 283 0 48 chr17 74890325 74890451 -20382200 - PB1D9 SINE Alu 0 120 1 9 1156 309 215 18 147 chr17 74890467 74890576 -20382075 - B1F SINE Alu -9 140 31 9 1156 485 244 17 9 chr17 74890813 74890929 -20381722 + PB1D7 SINE Alu 1 117 -3 9 1156 264 308 73 27 chr17 74891175 74891203 -20381448 - B4A SINE B4 -93 199 86 9 1156 296 272 111 0 chr17 74891203 74891284 -20381367 - PB1D10 SINE Alu -27 90 1 9 1156 183 42 0 0 chr17 74891301 74891325 -20381326 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9 1156 1083 50 50 0 chr17 74891383 74891524 -20381127 - B1_Mus1 SINE Alu 0 148 1 9 1156 387 260 52 0 chr17 74891985 74892081 -20380570 + B3A SINE B2 9 109 -89 9 1156 1208 110 33 6 chr17 74892156 74892339 -20380312 - B2_Mm2 SINE B2 -6 189 2 9 1156 727 165 21 14 chr17 74892378 74892519 -20380132 + B1_Mur4 SINE Alu 9 150 0 9 1156 3357 46 2 0 chr17 74892547 74892942 -20379709 - MTA_Mm LTR MaLR 0 396 1 9 1156 812 134 8 0 chr17 74892983 74893117 -20379534 - B1_Mus1 SINE Alu 0 148 14 9 1156 327 277 77 90 chr17 74892985 74893140 -20379511 - B4 SINE B4 -69 223 71 9 1156 317 250 0 0 chr17 74893500 74893564 -20379087 + B1_Mur4 SINE Alu 2 65 -85 9 1156 266 0 29 0 chr17 74893577 74893611 -20379040 + (TA)n Simple_repeat Simple_repeat 1 35 0 9 1156 496 218 0 0 chr17 74893949 74894036 -20378615 - B3 SINE B2 -129 87 1 9 1156 810 197 0 0 chr17 74894067 74894209 -20378442 - B1_Mus1 SINE Alu 0 148 7 9 1156 322 149 80 19 chr17 74894260 74894344 -20378307 + B1_Mur4 SINE Alu 42 120 0 9 1156 287 279 139 28 chr17 74894404 74894548 -20378103 - B3 SINE B2 -56 160 1 9 1156 239 261 15 0 chr17 74894560 74894625 -20378026 - MTEb LTR MaLR -24 355 290 9 1156 262 291 47 0 chr17 74894656 74894742 -20377909 - L1MC4a LINE L1 -892 6990 6901 9 1156 1034 65 58 0 chr17 74894744 74894883 -20377768 + B1_Mm SINE Alu 1 147 0 9 1156 288 77 0 0 chr17 74894883 74894922 -20377729 + (A)n Simple_repeat Simple_repeat 1 39 0 9 1156 575 283 141 30 chr17 74894985 74895247 -20377404 - B4 SINE B4 -1 291 1 9 1156 234 244 95 24 chr17 74895280 74895364 -20377287 - L1MC4a LINE L1 -1191 6851 6762 9 1156 267 280 27 0 chr17 74895368 74895443 -20377208 + B1F SINE Alu 41 117 -32 9 1156 281 281 61 20 chr17 74895472 74895570 -20377081 - L1MC4a LINE L1 -1120 6762 6661 9 1156 640 230 43 0 chr17 74896101 74896240 -20376411 - B1_Mur1 SINE Alu -3 146 2 9 1156 824 266 170 36 chr17 74896596 74896990 -20375661 - Charlie1a DNA MER1_type -121 1334 902 1 1156 577 185 296 0 chr17 74896990 74897152 -20375499 + B3 SINE B2 2 211 -5 1 1156 824 266 170 36 chr17 74897152 74897228 -20375423 - Charlie1a DNA MER1_type -554 901 801 1 1156 565 214 8 0 chr17 74897229 74897346 -20375305 + PB1D9 SINE Alu 2 119 -1 1 1156 507 234 30 30 chr17 74898065 74898197 -20374454 + B1_Mus1 SINE Alu 12 143 -5 1 1156 22 56 0 0 chr17 74898870 74898906 -20373745 + AT_rich Low_complexity Low_complexity 1 36 0 1 1156 242 220 40 0 chr17 74899790 74899840 -20372811 - ID4 SINE ID -3 80 29 1 1156 223 310 42 0 chr17 74899840 74899861 -20372790 - ID SINE ID -143 81 8 1 1156 432 0 0 0 chr17 74899933 74899981 -20372670 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1156 285 271 0 0 chr17 74900492 74900551 -20372100 + RLTR42-int LTR ERVK 1687 1745 -3777 1 1156 2790 44 88 6 chr17 74901581 74901943 -20370708 + MTA_Mm LTR MaLR 1 392 -4 1 1156 1046 43 7 0 chr17 74902018 74902156 -20370495 - B1_Mm SINE Alu 0 147 9 1 1156 1182 75 0 0 chr17 74902484 74902631 -20370020 - B1_Mus2 SINE Alu 0 147 1 1 1156 239 314 75 25 chr17 74902896 74903056 -20369595 + RMER15 LTR ERVL 384 551 -24 1 1156 1279 54 0 0 chr17 74903119 74903286 -20369365 + B2_Mm2 SINE B2 1 167 -28 1 1156 718 79 10 0 chr17 74903292 74903393 -20369258 + B2_Mm1t SINE B2 2 103 -90 1 1156 577 246 92 0 chr17 74903445 74903575 -20369076 - B1_Mur1 SINE Alu -6 143 2 1 1156 715 250 77 0 chr17 74903686 74903882 -20368769 + B3 SINE B2 1 211 -5 1 1156 560 302 68 60 chr17 74904398 74904648 -20368003 + B4A SINE B4 41 292 0 1 1156 302 204 226 0 chr17 74904714 74904807 -20367844 + PB1D10 SINE Alu 1 114 -3 1 1156 1252 103 11 0 chr17 74904877 74905052 -20367599 + B2_Mm1t SINE B2 3 179 -14 1 1156 435 87 375 0 chr17 74905084 74905188 -20367463 + B2_Mm2 SINE B2 47 189 -6 1 1156 23 0 0 0 chr17 74905454 74905477 -20367174 + AT_rich Low_complexity Low_complexity 1 23 0 1 1156 385 245 58 10 chr17 74905517 74905620 -20367031 + ID_B1 SINE B4 2 109 -115 1 1156 399 207 84 7 chr17 74905648 74905788 -20366863 + B3 SINE B2 3 178 -38 1 1156 229 234 0 0 chr17 74905801 74905848 -20366803 + ID_B1 SINE B4 175 221 -3 1 1156 999 31 0 0 chr17 74905852 74905979 -20366672 + B1_Mus1 SINE Alu 17 143 -5 1 1156 715 244 119 0 chr17 74906438 74906631 -20366020 - B3 SINE B2 0 216 1 1 1156 368 211 0 50 chr17 74906804 74906884 -20365767 + B1_Mur1 SINE Alu 73 148 -1 1 1156 1217 55 0 0 chr17 74906919 74907065 -20365586 + B1_Mus2 SINE Alu 2 147 0 1 1156 315 71 0 0 chr17 74907065 74907107 -20365544 + (A)n Simple_repeat Simple_repeat 1 42 0 1 1156 323 232 90 104 chr17 74907726 74907870 -20364781 + MER20 DNA MER1_type 1 142 -77 1 1156 1928 166 60 5 chr17 74907898 74908267 -20364384 - ORR1B1 LTR MaLR 0 394 6 1 1156 222 298 0 0 chr17 74908259 74908316 -20364335 + BC1_Mm scRNA scRNA 12 68 -84 1 1156 541 239 118 72 chr17 74908447 74908507 -20364144 + B4A SINE B4 1 107 -185 1 1156 739 69 2 5 chr17 74908507 74908621 -20364030 + B1_Mm SINE Alu 2 113 -7 1 1156 541 239 118 72 chr17 74908621 74908711 -20363940 + B4A SINE B4 108 273 -19 1 1156 586 281 7 0 chr17 74908783 74908922 -20363729 + ID_B1 SINE B4 80 219 -5 1 1156 824 224 11 42 chr17 74908950 74909141 -20363510 + B3 SINE B2 32 216 0 1 1156 936 119 0 27 chr17 74909147 74909294 -20363357 + B1_Mus2 SINE Alu 5 147 0 1 1156 574 234 26 98 chr17 74909575 74909684 -20362967 - ORR1D1 LTR MaLR 0 374 269 1 1156 1192 54 0 0 chr17 74909684 74909831 -20362820 + B1_Mus2 SINE Alu 1 147 0 1 1156 574 242 31 115 chr17 74909831 74909968 -20362683 - ORR1D1 LTR MaLR -110 274 149 1 1156 1495 62 0 30 chr17 74910029 74910229 -20362422 + B2_Mm2 SINE B2 2 195 0 1 1156 378 209 11 11 chr17 74910229 74910311 -20362340 - ORR1D1 LTR MaLR -199 175 94 1 1156 1639 32 21 0 chr17 74910401 74910590 -20362061 + B2_Mm1t SINE B2 1 193 0 1 1156 415 331 8 0 chr17 74910605 74910732 -20361919 + ID_B1 SINE B4 82 209 -15 1 1156 653 294 25 49 chr17 74910729 74910933 -20361718 + B4 SINE B4 6 204 -88 1 1156 189 0 0 0 chr17 74910939 74910960 -20361691 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 1156 831 133 218 34 chr17 74910973 74911152 -20361499 - B3 SINE B2 -2 214 3 1 1156 890 161 0 0 chr17 74911168 74911305 -20361346 - B1_Mus2 SINE Alu -10 137 1 1 1156 501 246 57 0 chr17 74911335 74911457 -20361194 + RSINE1 SINE B4 20 148 -17 1 1156 2304 165 100 80 chr17 74911464 74912025 -20360626 + RMER15 LTR ERVL 4 575 0 1 1156 278 308 0 49 chr17 74912063 74912145 -20360506 + B4 SINE B4 215 292 0 1 1156 428 278 50 31 chr17 74912263 74912423 -20360228 - RSINE1 SINE B4 0 165 3 1 1156 343 267 33 0 chr17 74912439 74912529 -20360122 + ID_B1 SINE B4 78 170 -54 1 1156 427 226 11 0 chr17 74912461 74912554 -20360097 + PB1D10 SINE Alu 22 115 -2 1 1156 1221 34 7 0 chr17 74912984 74913131 -20359520 + B1_Mus1 SINE Alu 1 148 0 1 1156 180 0 0 0 chr17 74913133 74913153 -20359498 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 1156 25 31 0 0 chr17 74913265 74913297 -20359354 + AT_rich Low_complexity Low_complexity 1 32 0 1 1156 441 198 11 11 chr17 74913476 74913563 -20359088 - B1_Mus2 SINE Alu -1 146 60 1 1156 886 150 0 20 chr17 74913566 74913716 -20358935 + B1_Mus2 SINE Alu 1 147 0 1 1156 231 237 33 17 chr17 74913733 74913793 -20358858 - ORR1D1 LTR MaLR -358 61 1 1 1156 234 294 0 0 chr17 74913793 74913842 -20358809 + ID_B1 SINE B4 164 212 -12 1 1156 1071 95 0 0 chr17 74913915 74914073 -20358578 + (CA)n Simple_repeat Simple_repeat 2 159 0 1 1156 588 229 60 85 chr17 74914145 74914345 -20358306 + B3A SINE B2 4 198 0 1 1156 294 95 0 0 chr17 74914371 74914413 -20358238 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1 1156 433 160 39 39 chr17 74914430 74914474 -20358177 + B1_Mm SINE Alu 44 86 -61 1 1156 441 66 0 0 chr17 74914474 74914535 -20358116 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 1156 433 160 39 39 chr17 74914535 74914594 -20358057 + B1_Mm SINE Alu 87 147 0 1 1156 185 59 37 56 chr17 74914596 74914650 -20358001 + A-rich Low_complexity Low_complexity 3 55 0 1 1156 347 323 11 75 chr17 74914650 74914741 -20357910 + RSINE1 SINE B4 3 91 -74 1 1156 2569 199 26 105 chr17 74914741 74915346 -20357305 + RMER19C LTR ERVK 1 565 -46 1 1156 1178 82 68 42 chr17 74915346 74915536 -20357115 - B2_Mm2 SINE B2 0 195 1 1 1156 2569 199 26 105 chr17 74915536 74915594 -20357057 + RMER19C LTR ERVK 566 611 0 1 1156 347 323 11 75 chr17 74915594 74915676 -20356975 + RSINE1 SINE B4 92 165 0 1 1156 276 265 24 0 chr17 74915714 74915797 -20356854 - PB1D10 SINE Alu -2 115 31 1 1156 612 267 144 32 chr17 74915868 74916181 -20356470 - L1MC2 LINE L1 -361 5983 5636 1 1156 1179 69 0 0 chr17 74916415 74916560 -20356091 - B1_Mus2 SINE Alu 0 147 3 1 1156 485 237 7 88 chr17 74916580 74916728 -20355923 - B1_Mur2 SINE Alu -2 147 12 1 1156 999 225 14 14 chr17 74916912 74917124 -20355527 - B3 SINE B2 0 216 5 1 1156 1309 109 16 0 chr17 74917172 74917364 -20355287 - B2_Mm2 SINE B2 0 195 1 1 1156 747 99 0 55 chr17 74917394 74917522 -20355129 - B1_Mur4 SINE Alu 0 150 30 1 1156 303 218 0 0 chr17 74917816 74917871 -20354780 - HAL1-3A_ME LINE L1 -828 2030 1976 1 1156 24 0 0 0 chr17 74917939 74917963 -20354688 + AT_rich Low_complexity Low_complexity 1 24 0 1 1156 260 200 0 68 chr17 74918103 74918162 -20354489 - B3A SINE B2 -143 55 1 1 1156 1414 78 16 5 chr17 74918296 74918488 -20354163 - B2_Mm2 SINE B2 -1 194 1 1 1156 285 51 0 0 chr17 74918540 74918579 -20354072 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1156 723 103 0 327 chr17 74919403 74919499 -20353152 - B1_Mus1 SINE Alu -2 146 55 1 1156 1232 54 0 0 chr17 74919499 74919646 -20353005 + B1_Mm SINE Alu 1 147 0 1 1156 723 103 0 327 chr17 74919646 74919766 -20352885 - B1_Mus1 SINE Alu -94 54 1 1 1156 29 0 0 0 chr17 74919768 74919797 -20352854 + AT_rich Low_complexity Low_complexity 1 29 0 1 1156 740 200 0 29 chr17 74919853 74919992 -20352659 + B1_Mus2 SINE Alu 5 139 -8 1 1156 557 0 29 0 chr17 74920094 74920162 -20352489 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 1 1156 477 0 0 0 chr17 74920174 74920227 -20352424 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1156 396 327 6 57 chr17 74920247 74920422 -20352229 - Lx9 LINE L1 -227 7417 7252 1 1156 435 119 0 0 chr17 74920534 74920601 -20352050 + (CAA)n Simple_repeat Simple_repeat 2 68 0 1 1156 299 299 9 0 chr17 74920625 74920732 -20351919 + (TAAG)n Simple_repeat Simple_repeat 1 108 0 1 1156 273 348 49 7 chr17 74920905 74921047 -20351604 - Lx8 LINE L1 -358 7115 6968 1 1156 387 0 0 0 chr17 74921231 74921274 -20351377 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1156 237 172 0 0 chr17 74921280 74921344 -20351307 + GA-rich Low_complexity Low_complexity 2 65 0 1 1156 342 301 68 0 chr17 74921344 74921447 -20351204 - RSINE1 SINE B4 -53 112 3 1 1156 1120 95 43 43 chr17 74921485 74921672 -20350979 - B2_Mm2 SINE B2 -7 188 2 1 1156 1460 22 0 0 chr17 74921682 74921863 -20350788 - B2_Mm1a SINE B2 -6 187 7 1 1156 882 212 25 10 chr17 74922241 74922441 -20350210 - B3 SINE B2 -10 206 4 1 1156 541 263 69 25 chr17 74922460 74922620 -20350031 - B3A SINE B2 -31 167 1 1 1156 1127 172 103 0 chr17 74922625 74922829 -20349822 + URR1B DNA MER1_type 1 225 0 1 1156 1281 94 44 0 chr17 74923043 74923223 -20349428 + B2_Mm2 SINE B2 1 188 -7 1 1156 249 263 40 0 chr17 74923224 74923300 -20349351 - L1M3 LINE L1 -2023 4117 4039 1 1156 387 0 0 0 chr17 74923329 74923372 -20349279 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1156 270 106 0 0 chr17 74923494 74923541 -20349110 + (T)n Simple_repeat Simple_repeat 1 47 0 1 1156 1143 95 0 0 chr17 74923548 74923695 -20348956 - B1_Mus2 SINE Alu 0 147 1 1 1156 347 167 105 29 chr17 74923695 74923792 -20348859 - L1MC LINE L1 -2134 4012 3908 1 1156 235 206 0 161 chr17 74924094 74924181 -20348470 - B1F SINE Alu 0 149 77 1 1156 210 71 0 0 chr17 74924188 74924216 -20348435 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1156 1199 55 0 0 chr17 74924216 74924362 -20348289 - B1_Mus2 SINE Alu 0 147 2 1 1156 663 222 88 29 chr17 74924364 74924568 -20348083 - B3 SINE B2 0 216 1 1 1156 577 154 10 0 chr17 74924606 74924710 -20347941 - B1_Mus1 SINE Alu -43 105 1 1 1156 2381 64 12 22 chr17 74924741 74925062 -20347589 - L1_Mus1 LINE L1 0 6567 6250 1 1156 1418 91 5 0 chr17 74925182 74925369 -20347282 + B2_Mm1a SINE B2 1 188 -5 1 1156 1072 97 7 0 chr17 74925404 74925549 -20347102 + B1_Mus2 SINE Alu 2 147 0 1 1156 514 174 43 0 chr17 74925581 74925673 -20346978 + B1_Mur2 SINE Alu 47 142 -7 1 1156 934 78 132 0 chr17 74925952 74926081 -20346570 + B1_Mus2 SINE Alu 2 147 0 1 1156 232 133 22 0 chr17 74926238 74926283 -20346368 - B1_Mur4 SINE Alu -103 47 2 1 1156 293 289 106 0 chr17 74926309 74926413 -20346238 - PB1D10 SINE Alu 0 117 3 1 1156 2667 92 52 12 chr17 74926517 74926922 -20345729 - BGLII LTR ERVK 0 421 1 1 1156 29 28 0 0 chr17 74927934 74927970 -20344681 + GC_rich Low_complexity Low_complexity 1 36 0 1 1156 24 67 0 0 chr17 74928145 74928190 -20344461 + GC_rich Low_complexity Low_complexity 1 45 0 1 1156 294 29 0 0 chr17 74928781 74928816 -20343835 + (A)n Simple_repeat Simple_repeat 1 35 0 1 1156 302 234 118 27 chr17 74929860 74929970 -20342681 - PB1D9 SINE Alu 0 120 1 1 1156 380 277 104 28 chr17 74929989 74930171 -20342480 - B3A SINE B2 0 198 3 1 1156 1115 89 0 0 chr17 74930221 74930367 -20342284 + B1_Mm SINE Alu 2 147 0 1 1156 240 222 0 73 chr17 74930651 74930719 -20341932 + B3A SINE B2 9 71 -127 1 1156 429 36 0 0 chr17 74930768 74930823 -20341828 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1156 579 159 0 53 chr17 74931311 74931424 -20341227 - B1_Mus2 SINE Alu -13 134 28 1 1156 688 83 0 0 chr17 74931532 74931628 -20341023 + B1_Mus2 SINE Alu 52 147 0 1 1156 254 191 0 0 chr17 74931659 74931706 -20340945 + B1_Mus2 SINE Alu 87 133 -14 1 1156 378 0 0 0 chr17 74931706 74931748 -20340903 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1 1156 1263 38 0 0 chr17 74931748 74931907 -20340744 - B2_Mm1a SINE B2 -33 160 2 1 1156 313 179 29 15 chr17 74932010 74932078 -20340573 + B1_Mur1 SINE Alu 74 142 -7 1 1156 659 230 77 25 chr17 74932086 74932282 -20340369 + B3 SINE B2 1 206 -10 1 1156 204 200 0 0 chr17 74932399 74932444 -20340207 + CT-rich Low_complexity Low_complexity 2 46 0 1 1156 691 184 0 54 chr17 74932452 74932601 -20340050 - B1_Mus2 SINE Alu -6 141 1 1 1156 1314 120 0 15 chr17 74932664 74932859 -20339792 - B2_Mm2 SINE B2 -2 193 2 1 1156 402 221 107 0 chr17 74933139 74933261 -20339390 - B1_Mur1 SINE Alu -6 143 9 1 1156 227 321 49 28 chr17 74933261 74933277 -20339374 - ID_B1 SINE B4 0 192 78 1 1156 1304 62 79 0 chr17 74933470 74933648 -20339003 - B2_Mm1t SINE B2 0 193 2 1 1156 21 0 0 0 chr17 74933725 74933746 -20338905 + AT_rich Low_complexity Low_complexity 1 21 0 1 1156 1017 43 0 0 chr17 74934201 74934339 -20338312 + B1_Mm SINE Alu 10 147 0 1 1156 260 27 27 0 chr17 74934345 74934382 -20338269 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 1 1156 689 226 57 33 chr17 74934409 74934620 -20338031 - B3 SINE B2 0 216 1 1 1156 1739 16 0 0 chr17 74934643 74934835 -20337816 - B2_Mm1a SINE B2 0 193 2 1 1156 189 214 0 0 chr17 74935012 74935054 -20337597 + (CATA)n Simple_repeat Simple_repeat 3 44 0 1 1156 400 188 38 0 chr17 74935219 74935299 -20337352 + B1_Mur2 SINE Alu 66 148 -1 1 1156 309 301 24 0 chr17 74935586 74935669 -20336982 - RSINE1 SINE B4 -38 127 43 1 1156 216 0 0 0 chr17 74935765 74935789 -20336862 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1156 820 26 0 58 chr17 74935794 74935914 -20336737 - B1_Mm SINE Alu -5 142 30 1 1156 1171 188 38 0 chr17 74935928 74936141 -20336510 - URR1B DNA MER1_type 0 225 5 1 1156 1288 106 16 5 chr17 74936480 74936670 -20335981 - B2_Mm1t SINE B2 0 193 2 1 1156 270 237 63 175 chr17 74937277 74937420 -20335231 - B1_Mus2 SINE Alu -14 133 7 1 1156 222 171 0 0 chr17 74937426 74937467 -20335184 + CT-rich Low_complexity Low_complexity 2 42 0 1 1156 231 222 0 18 chr17 74937665 74937720 -20334931 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1156 313 135 19 0 chr17 74937720 74937772 -20334879 - B1F1 SINE Alu -11 138 86 1 1156 286 250 48 77 chr17 74937946 74938050 -20334601 + PB1D10 SINE Alu 17 117 0 1 1156 327 144 308 51 chr17 74938167 74938284 -20334367 - B2_Mm2 SINE B2 -2 193 47 1 1156 977 129 23 12 chr17 74938300 74938472 -20334179 - B2_Mm2 SINE B2 -14 181 8 1 1156 589 186 8 34 chr17 74938498 74938615 -20334036 - B1_Mur2 SINE Alu -1 148 35 1 1156 635 229 44 93 chr17 74938755 74938938 -20333713 - ID_B1 SINE B4 -1 223 50 1 1156 276 259 48 24 chr17 74939136 74939219 -20333432 + B1_Mur1 SINE Alu 62 146 -3 1 1156 299 159 48 0 chr17 74939419 74939482 -20333169 - PB1D9 SINE Alu -8 112 47 1 1156 1740 16 0 0 chr17 74939692 74939885 -20332766 - B2_Mm1a SINE B2 0 193 1 1 1156 326 281 79 29 chr17 74939941 74940080 -20332571 + B1F SINE Alu 2 147 -2 1 1156 1168 28 0 40 chr17 74940251 74940400 -20332251 - B1_Mm SINE Alu 0 147 5 1 1156 255 254 0 95 chr17 74940423 74940497 -20332154 + ID4_ SINE ID 4 70 -13 1 1156 1224 34 0 7 chr17 74940976 74941123 -20331528 - B1_Mm SINE Alu -1 146 1 1 1156 515 252 22 22 chr17 74941125 74941263 -20331388 - B1_Mur4 SINE Alu 0 150 13 1 1156 898 105 15 0 chr17 74941412 74941545 -20331106 - B1_Mus1 SINE Alu -5 143 9 1 1156 2134 38 45 11 chr17 74941957 74942222 -20330429 + L1Md_F2 LINE L1 6309 6582 0 1 1156 636 249 17 24 chr17 74942233 74942397 -20330254 - B3 SINE B2 -31 164 2 1 1156 21 0 0 0 chr17 74942403 74942424 -20330227 + AT_rich Low_complexity Low_complexity 1 21 0 1 1156 212 0 36 0 chr17 74942594 74942622 -20330029 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1 1156 1020 52 0 0 chr17 74942622 74942758 -20329893 - B1_Mus1 SINE Alu -7 141 6 1 1156 200 149 21 0 chr17 74942788 74942835 -20329816 + GA-rich Low_complexity Low_complexity 2 49 0 1 1156 352 272 173 23 chr17 74942941 74943114 -20329537 - Helitron3Na_Mam RC Helitron 0 486 288 1 1156 298 224 13 38 chr17 74943488 74943567 -20329084 + B1F SINE Alu 1 77 -72 1 1156 214 236 0 83 chr17 74943645 74943705 -20328946 - ID4_ SINE ID 0 83 29 1 1156 357 349 161 21 chr17 74943738 74944110 -20328541 - L1ME1 LINE L1 -274 5905 5482 1 1156 699 188 72 0 chr17 74944245 74944383 -20328268 - B1_Mus1 SINE Alu 0 148 1 1 1156 349 241 12 178 chr17 74944625 74944883 -20327768 + L1M4 LINE L1 4564 4778 -1368 1 1156 239 275 43 0 chr17 74944889 74944958 -20327693 + ID4 SINE ID 8 79 -4 1 1156 341 274 37 61 chr17 74944967 74945130 -20327521 + L1M4 LINE L1 4771 4929 -1217 1 1156 220 331 50 86 chr17 74945274 74945302 -20327349 - ID_B1 SINE B4 -20 204 114 1 1156 252 343 30 10 chr17 74945302 74945402 -20327249 - PB1D10 SINE Alu -15 102 1 1 1156 220 331 50 86 chr17 74945402 74945413 -20327238 - ID_B1 SINE B4 -20 113 71 1 1156 211 279 18 46 chr17 74946208 74946317 -20326334 + CT-rich Low_complexity Low_complexity 4 109 0 1 1156 462 317 106 0 chr17 74946383 74946506 -20326145 - ID_B1 SINE B4 -9 215 80 1 1156 389 235 35 0 chr17 74946512 74946597 -20326054 - B4A SINE B4 -123 169 82 1 1156 723 127 119 0 chr17 74946632 74946766 -20325885 - B1_Mur4 SINE Alu 0 150 1 1 1156 334 299 101 7 chr17 74946907 74947055 -20325596 - Lx7 LINE L1 -395 7301 7140 1 1156 237 132 0 0 chr17 74947221 74947259 -20325392 + (TCCC)n Simple_repeat Simple_repeat 3 40 0 1 1156 775 203 14 0 chr17 74947267 74947410 -20325241 - B1_Mus2 SINE Alu -1 146 2 1 1156 370 270 34 0 chr17 74947441 74947530 -20325121 - RSINE1 SINE B4 -68 97 6 1 1156 26 30 0 0 chr17 74948018 74948051 -20324600 + AT_rich Low_complexity Low_complexity 1 33 0 1 1156 735 286 70 0 chr17 74948461 74948632 -20324019 - B3 SINE B2 -14 202 20 1 1156 363 119 0 0 chr17 74948670 74948737 -20323914 + (TC)n Simple_repeat Simple_repeat 1 67 0 1 1156 333 0 0 0 chr17 74948737 74948774 -20323877 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1156 825 258 22 6 chr17 74948775 74948958 -20323693 - B3 SINE B2 -29 187 2 1 1156 960 77 0 0 chr17 74948963 74949093 -20323558 + (TCTCC)n Simple_repeat Simple_repeat 1 130 0 1 1156 1602 0 0 0 chr17 74949093 74949271 -20323380 + (TCCCC)n Simple_repeat Simple_repeat 3 180 0 1 1156 703 176 20 0 chr17 74949272 74949425 -20323226 + CT-rich Low_complexity Low_complexity 2 157 0 1 1156 694 114 96 96 chr17 74949427 74949573 -20323078 - B1_Mur4 SINE Alu 0 150 5 1 1156 307 300 101 50 chr17 74949769 74949922 -20322729 - RSINE1 SINE B4 -133 159 2 1 1156 316 367 0 0 chr17 74949925 74950015 -20322636 + C-rich Low_complexity Low_complexity 5 94 0 1 1156 1618 36 0 25 chr17 74951074 74951272 -20321379 - B2_Mm1t SINE B2 0 193 1 1 1156 268 356 103 58 chr17 74951339 74951494 -20321157 - RSINE1 SINE B4 0 165 4 1 1156 353 279 152 14 chr17 74951574 74951712 -20320939 - B4A SINE B4 -87 205 49 1 1156 265 308 44 0 chr17 74951911 74952002 -20320649 - ERVL-int LTR ERVL -752 4915 4821 1 1156 266 290 32 0 chr17 74952253 74952346 -20320305 - ERVL-int LTR ERVL -1173 4584 4489 1 1156 622 222 0 53 chr17 74953050 74953183 -20319468 - B1_Mur2 SINE Alu 0 149 24 1 1156 265 291 75 43 chr17 74953323 74953510 -20319141 - ERVL-E-int LTR ERVL -3429 2238 2046 1 1156 373 247 56 0 chr17 74953606 74953695 -20318956 + RSINE1 SINE B4 26 119 -46 1 1156 807 133 67 0 chr17 74953753 74953888 -20318763 + B1_Mur4 SINE Alu 1 144 -6 1 1156 232 138 0 33 chr17 74953888 74953942 -20318709 + GA-rich Low_complexity Low_complexity 8 59 0 1 1156 188 226 0 16 chr17 74954352 74954415 -20318236 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 1156 412 324 141 46 chr17 74954417 74954679 -20317972 - B4A SINE B4 0 292 6 1 1156 352 273 13 0 chr17 74954679 74954756 -20317895 - ID4_ SINE ID -3 80 3 1 1156 32 43 0 0 chr17 74955016 74955062 -20317589 + AT_rich Low_complexity Low_complexity 1 46 0 1 1156 228 35 0 0 chr17 74955077 74955106 -20317545 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 1 1156 460 257 0 152 chr17 74955106 74955211 -20317440 - B1_Mur3 SINE Alu -13 136 54 1 1156 1310 66 60 22 chr17 74955211 74955222 -20317429 - B2_Mm2 SINE B2 -3 192 185 1 1156 219 36 0 0 chr17 74955222 74955250 -20317401 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1 1156 1310 66 60 22 chr17 74955250 74955423 -20317228 - B2_Mm2 SINE B2 -11 184 1 1 1156 460 257 0 152 chr17 74955423 74955475 -20317176 - B1_Mur3 SINE Alu -96 53 2 1 1156 305 281 144 10 chr17 74955483 74955587 -20317064 - B3A SINE B2 -7 191 74 1 1156 374 258 40 20 chr17 74955921 74956020 -20316631 - PB1D7 SINE Alu -9 111 11 1 1156 324 260 39 0 chr17 74956080 74956184 -20316467 - ID4 SINE ID -30 122 15 1 1156 24 32 0 0 chr17 74956188 74956219 -20316432 + AT_rich Low_complexity Low_complexity 1 31 0 1 1156 798 158 60 0 chr17 74956226 74956359 -20316292 + B1_Mur2 SINE Alu 3 143 -6 1 1156 200 149 0 21 chr17 74956360 74956408 -20316243 + (CAA)n Simple_repeat Simple_repeat 2 48 0 1 1156 413 290 38 82 chr17 74956445 74957052 -20315599 - L1MA7 LINE L1 -4 6287 5722 1 1156 216 97 0 0 chr17 74957620 74957651 -20315000 + (TTTTC)n Simple_repeat Simple_repeat 3 33 0 1 1156 1211 48 0 0 chr17 74957651 74957798 -20314853 - B1_Mm SINE Alu 0 147 1 1 1156 594 260 229 4 chr17 74958778 74958967 -20313684 - MTEa LTR MaLR -17 342 118 1 1156 231 36 0 0 chr17 74958967 74958995 -20313656 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1 1156 594 299 91 6 chr17 74958995 74959070 -20313581 - MTEa LTR MaLR -262 117 29 1 1156 238 174 22 0 chr17 74959168 74959214 -20313437 + ID_B1 SINE B4 167 213 -11 1 1156 283 273 12 49 chr17 74959807 74959888 -20312763 - PB1D10 SINE Alu -23 94 17 1 1156 489 190 88 117 chr17 74959917 74960054 -20312597 + B1_Mus2 SINE Alu 3 135 -12 1 1156 206 243 29 0 chr17 74961229 74961299 -20311352 + CT-rich Low_complexity Low_complexity 4 75 0 1 1156 328 302 264 15 chr17 74962104 74962279 -20310372 - B3A SINE B2 -3 213 1 1 1156 323 225 88 0 chr17 74962299 74962379 -20310272 - ID_B1 SINE B4 -9 215 129 1 1156 385 235 89 96 chr17 74962385 74962531 -20310120 - B1_Mur3 SINE Alu 0 149 5 1 1156 294 282 26 155 chr17 74962531 74962599 -20310052 - B1F1 SINE Alu -97 52 6 1 1156 280 325 107 16 chr17 74962621 74962656 -20309995 - ID_B1 SINE B4 -12 212 82 1 1156 375 271 35 0 chr17 74962656 74962741 -20309910 - PB1D7 SINE Alu -32 88 1 1 1156 685 204 13 84 chr17 74963078 74963233 -20309418 + B1_Mm SINE Alu 2 145 -2 1 1156 345 197 0 15 chr17 74963405 74963472 -20309179 + PB1D9 SINE Alu 40 105 -15 1 1156 1277 98 5 21 chr17 74963560 74963747 -20308904 - B2_Mm2 SINE B2 -11 184 1 1 1156 28 29 0 0 chr17 74963856 74963891 -20308760 + AT_rich Low_complexity Low_complexity 1 35 0 1 1156 1110 82 0 40 chr17 74964350 74964502 -20308149 + B1_Mm SINE Alu 2 147 0 1 1156 1221 94 43 22 chr17 74964523 74964707 -20307944 + B2_Mm1t SINE B2 1 188 -5 1 1156 258 313 40 20 chr17 74966106 74966207 -20306444 + BC1_Mm scRNA scRNA 5 107 -45 1 1156 574 263 22 0 chr17 74966848 74966985 -20305666 - B1F2 SINE Alu -8 141 2 1 1156 447 19 0 0 chr17 74967488 74967540 -20305111 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1156 236 254 14 69 chr17 74967669 74967741 -20304910 + ID4_ SINE ID 3 70 -13 1 1156 302 0 0 0 chr17 74968164 74968202 -20304449 - MERVL-int LTR ERVL 0 5485 5448 1 1156 363 125 26 53 chr17 74968202 74968278 -20304373 - ORR1A3-int LTR MaLR -1323 640 567 1 1156 1827 33 8 0 chr17 74968278 74968518 -20304133 - MERVL-int LTR ERVL -114 5371 5130 1 1156 268 276 85 9 chr17 74968631 74968737 -20303914 - PB1D9 SINE Alu -6 114 1 1 1156 2575 129 90 77 chr17 74969038 74969119 -20303532 - RLTR20A1 LTR ERVK 0 551 461 1 1156 225 0 0 0 chr17 74969119 74969144 -20303507 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 1 1156 2575 129 90 77 chr17 74969144 74969606 -20303045 - RLTR20A1 LTR ERVK -91 460 1 1 1156 21 0 0 0 chr17 74969928 74969949 -20302702 + AT_rich Low_complexity Low_complexity 1 21 0 1 1156 233 208 14 0 chr17 74970252 74970324 -20302327 + CT-rich Low_complexity Low_complexity 1 73 0 1 1156 1383 89 0 6 chr17 74970327 74971356 -20301295 + (TCC)n Simple_repeat Simple_repeat 1 1023 0 1 1156 231 286 71 0 chr17 74971432 74971502 -20301149 - PB1 SINE Alu -33 94 20 1 1156 962 117 0 40 chr17 74971632 74971783 -20300868 - B1_Mus1 SINE Alu -1 147 3 1 1156 237 65 0 0 chr17 74971793 74971824 -20300827 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 1 1156 733 232 96 35 chr17 74972521 74972718 -20299933 - B3 SINE B2 -6 210 2 1 1156 230 233 0 0 chr17 74972820 74972863 -20299788 - ID4_ SINE ID -1 82 40 1 1156 252 0 0 0 chr17 74973150 74973178 -20299473 + (T)n Simple_repeat Simple_repeat 1 28 0 1 144 1187 48 0 13 chr17 74973178 74973327 -20299324 - B1_Mus1 SINE Alu 0 148 2 1 1157 508 211 73 0 chr17 74974005 74974114 -20298537 - B1_Mus1 SINE Alu -30 118 2 1 1157 613 303 24 84 chr17 74974120 74974333 -20298318 - B4A SINE B4 -85 207 8 1 1157 331 276 70 20 chr17 74975286 74975386 -20297265 + PB1D7 SINE Alu 5 109 -11 1 1157 651 221 41 0 chr17 74975525 74975647 -20297004 - B1_Mur1 SINE Alu -5 144 18 1 1157 291 308 18 61 chr17 74975564 74975678 -20296973 - MT2B LTR ERVL -343 258 150 1 1157 805 281 58 82 chr17 74975834 74976128 -20296523 - B4 SINE B4 -4 288 2 1 1157 245 241 35 0 chr17 74976739 74976797 -20295854 + ID SINE ID 23 82 -142 1 1157 377 244 129 8 chr17 74976953 74977085 -20295566 - B1F SINE Alu -1 148 1 1 1157 23 68 0 0 chr17 74978191 74978235 -20294416 + AT_rich Low_complexity Low_complexity 1 44 0 1 1157 404 324 40 20 chr17 74978235 74978386 -20294265 - RSINE1 SINE B4 -8 157 4 1 1157 260 295 0 0 chr17 74980126 74980187 -20292464 + PB1D10 SINE Alu 36 96 -21 1 1157 1112 58 7 0 chr17 74980691 74980829 -20291822 - B1_Mus1 SINE Alu -9 139 1 1 1157 275 272 99 0 chr17 74981486 74981567 -20291084 - MIR SINE MIR -118 144 56 1 1157 736 74 28 0 chr17 74981660 74981768 -20290883 + B1_Mm SINE Alu 37 147 0 1 1157 22 0 0 0 chr17 74981774 74981796 -20290855 + AT_rich Low_complexity Low_complexity 1 22 0 1 1157 21 0 0 0 chr17 74981930 74981951 -20290700 + AT_rich Low_complexity Low_complexity 1 21 0 1 1157 398 359 98 5 chr17 74982136 74982360 -20290291 - B4A SINE B4 -2 290 46 1 1157 26 0 0 0 chr17 74982380 74982406 -20290245 + AT_rich Low_complexity Low_complexity 1 26 0 1 1157 1044 281 109 13 chr17 74982502 74983100 -20289551 - L1MA6 LINE L1 -74 6226 5572 1 1157 333 0 0 0 chr17 74983112 74983149 -20289502 + (TATG)n Simple_repeat Simple_repeat 3 39 0 1 1157 3488 89 46 7 chr17 74983180 74983722 -20288929 - Lx3A LINE L1 -103 6878 6316 1 1157 222 136 0 0 chr17 74984246 74984290 -20288361 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 1157 638 223 64 7 chr17 74984743 74984883 -20287768 - B3 SINE B2 -22 194 47 1 1157 1087 63 7 14 chr17 74984919 74985064 -20287587 - B1_Mus1 SINE Alu 0 148 5 1 1157 414 39 0 0 chr17 74985722 74985774 -20286877 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1157 508 311 61 0 chr17 74985776 74985908 -20286743 - RSINE1 SINE B4 -22 143 4 1 1157 575 221 145 27 chr17 74985971 74986157 -20286494 + B3 SINE B2 1 208 -8 1 1157 576 244 23 8 chr17 74986630 74986758 -20285893 - B1F2 SINE Alu -17 132 3 1 1157 875 181 82 63 chr17 74986795 74987001 -20285650 - B3 SINE B2 -6 210 1 1 1157 478 214 16 71 chr17 74987286 74987412 -20285239 + PB1D9 SINE Alu 1 119 -1 1 1157 799 251 46 5 chr17 74987426 74987622 -20285029 + B3 SINE B2 2 205 -11 1 1157 310 289 10 30 chr17 74987733 74987833 -20284818 + B1_Mus1 SINE Alu 5 102 -46 1 1157 1415 68 10 40 chr17 74988141 74988339 -20284312 - B2_Mm2 SINE B2 -3 192 1 1 1157 288 0 0 0 chr17 74988507 74988539 -20284112 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1 1157 1044 138 0 0 chr17 74988539 74988691 -20283960 - B2_Mm2 SINE B2 -42 153 2 1 1157 283 355 0 16 chr17 74989840 74989963 -20282688 - L2 LINE L2 -716 2703 2583 1 1157 996 90 14 14 chr17 74990125 74990271 -20282380 - B1_Mm SINE Alu -1 146 1 1 1157 466 363 6 6 chr17 74990592 74990761 -20281890 + CT-rich Low_complexity Low_complexity 4 172 0 1 1157 813 146 14 14 chr17 74990765 74990904 -20281747 - B1_Mus1 SINE Alu -5 143 5 1 1157 306 0 0 0 chr17 74990909 74990943 -20281708 + (TCTCC)n Simple_repeat Simple_repeat 1 34 0 1 1157 1410 56 0 0 chr17 74990943 74991123 -20281528 + (TCCCC)n Simple_repeat Simple_repeat 1 180 0 1 1157 641 101 10 0 chr17 74991134 74991233 -20281418 + (TCCCC)n Simple_repeat Simple_repeat 2 101 0 1 1157 2256 178 81 17 chr17 74991280 74991750 -20280901 - Lx4A LINE L1 -23 7035 6536 1 1157 2793 123 37 7 chr17 74991742 74992200 -20280451 + Lx4A LINE L1 6058 6529 -529 1 1157 583 48 24 0 chr17 74993023 74993106 -20279545 + (TCCCC)n Simple_repeat Simple_repeat 2 86 0 1 1157 408 71 0 0 chr17 74993278 74993334 -20279317 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1157 190 322 67 22 chr17 74993334 74993423 -20279228 - MER5B DNA MER1_type -72 106 14 1 1157 594 261 29 0 chr17 74994918 74995056 -20277595 - B1_Mur2 SINE Alu -7 142 1 1 1157 198 0 0 0 chr17 74996026 74996048 -20276603 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1157 25 0 0 0 chr17 74996749 74996774 -20275877 + AT_rich Low_complexity Low_complexity 1 25 0 1 1157 495 0 0 0 chr17 74996774 74996829 -20275822 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 1157 1158 61 0 20 chr17 74996833 74996984 -20275667 - B1_Mus1 SINE Alu 0 148 1 1 1157 1150 76 0 0 chr17 74997977 74998121 -20274530 - B1_Mus2 SINE Alu -3 144 1 1 1157 737 122 95 24 chr17 74999506 74999632 -20273019 + B1_Mur4 SINE Alu 2 136 -14 1 1157 1675 166 105 3 chr17 74999649 75000000 -20272651 - RMER1B Other Other -12 1054 668 1 1157 761 253 78 65 chr17 75000000 75000245 -20272406 - RMER1B Other Other -399 667 420 1 1157 333 0 0 0 chr17 75000250 75000287 -20272364 + (TTATA)n Simple_repeat Simple_repeat 3 39 0 2 1157 247 169 100 15 chr17 75000550 75000647 -20272004 - B3 SINE B2 -70 125 16 3 1157 268 301 0 57 chr17 75000734 75000822 -20271829 - ID_B1 SINE B4 -37 187 105 4 1157 677 197 101 24 chr17 75001011 75001219 -20271432 - URR1A DNA MER1_type 0 226 3 5 1157 649 214 92 0 chr17 75001589 75001720 -20270931 - B1_Mur3 SINE Alu -5 144 2 6 1157 803 172 7 40 chr17 75001752 75001903 -20270748 - B1_Mur3 SINE Alu -3 146 1 7 1157 617 303 32 42 chr17 75002654 75002871 -20269780 - B3 SINE B2 0 216 2 8 1157 221 241 138 12 chr17 75003118 75003198 -20269453 - B1_Mus1 SINE Alu -58 90 1 9 1157 386 19 57 0 chr17 75003219 75003272 -20269379 + (TTTTA)n Simple_repeat Simple_repeat 5 60 0 1 1157 427 311 124 6 chr17 75003273 75003451 -20269200 - B3 SINE B2 -17 199 1 1 1157 243 88 0 0 chr17 75003586 75003620 -20269031 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1157 1153 54 0 39 chr17 75003620 75003773 -20268878 - B1_Mus2 SINE Alu 0 147 1 1 1157 561 15 0 0 chr17 75004792 75004858 -20267793 + (CA)n Simple_repeat Simple_repeat 2 67 0 1 1157 215 167 21 0 chr17 75005679 75005727 -20266924 + T-rich Low_complexity Low_complexity 5 53 0 1 1157 3039 45 39 3 chr17 75006564 75006946 -20265705 - MTA_Mm LTR MaLR 0 396 1 1 1157 1430 78 39 13 chr17 75006946 75007180 -20265471 - MTA_Mm-int LTR MaLR 0 1098 859 1 1157 330 98 0 0 chr17 75008429 75008480 -20264171 + (CAG)n Simple_repeat Simple_repeat 1 51 0 1 1157 21 0 0 0 chr17 75009591 75009612 -20263039 + AT_rich Low_complexity Low_complexity 1 21 0 1 1157 228 194 42 127 chr17 75009727 75009798 -20262853 - B3 SINE B2 -146 70 6 1 1157 330 294 80 14 chr17 75011086 75011224 -20261427 - B1_Mur1 SINE Alu -1 148 2 2 1157 21 0 0 0 chr17 75011772 75011793 -20260858 + AT_rich Low_complexity Low_complexity 1 21 0 2 1157 218 281 17 34 chr17 75011798 75011857 -20260794 - ID4 SINE ID -6 77 20 2 1157 438 171 0 12 chr17 75012157 75012240 -20260411 - B1_Mus2 SINE Alu 0 147 66 2 1157 1357 40 97 0 chr17 75013251 75013426 -20259225 + B2_Mm1a SINE B2 2 193 0 2 1157 459 265 10 10 chr17 75013860 75013963 -20258688 - B1_Mur1 SINE Alu -23 126 24 2 1157 214 252 31 31 chr17 75014129 75014153 -20258498 + (TTATA)n Simple_repeat Simple_repeat 2 25 0 2 1157 1338 53 35 65 chr17 75014153 75014354 -20258297 - B2_Mm2 SINE B2 0 195 1 2 1157 214 252 31 31 chr17 75014354 75014456 -20258195 + (TTATA)n Simple_repeat Simple_repeat 5 106 0 2 1157 200 59 29 0 chr17 75014818 75014852 -20257799 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 2 1157 25 65 0 0 chr17 75015018 75015064 -20257587 + AT_rich Low_complexity Low_complexity 1 46 0 3 1157 322 250 80 40 chr17 75015645 75015745 -20256906 + PB1D9 SINE Alu 14 117 -3 3 1157 270 0 0 0 chr17 75016071 75016101 -20256550 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 3 1157 3807 181 72 48 chr17 75016101 75016989 -20255662 - Lx3C LINE L1 -13 6963 6055 3 1157 2235 169 22 12 chr17 75016984 75017397 -20255254 + L1_Mur1 LINE L1 4875 5291 -595 3 1157 623 200 88 15 chr17 75017428 75017565 -20255086 - B1_Mm SINE Alu 0 147 1 3 1157 536 240 220 11 chr17 75018740 75018917 -20253734 - B3 SINE B2 0 216 3 3 1157 25 31 0 0 chr17 75019612 75019644 -20253007 + AT_rich Low_complexity Low_complexity 1 32 0 3 1157 6919 48 72 2 chr17 75019832 75020748 -20251903 - L1_Mus1 LINE L1 0 6567 5588 3 1157 262 319 14 0 chr17 75020938 75021007 -20251644 + ID_B1 SINE B4 84 153 -71 3 1157 189 0 0 0 chr17 75021036 75021057 -20251594 + (GTTTG)n Simple_repeat Simple_repeat 2 22 0 4 1157 1043 86 0 21 chr17 75021057 75021192 -20251459 - B1_Mus1 SINE Alu -9 139 5 4 1157 442 212 163 41 chr17 75021941 75022064 -20250587 + B1_Mus2 SINE Alu 3 140 -7 4 1157 947 154 59 0 chr17 75022593 75022762 -20249889 + B2_Mm1t SINE B2 1 179 -14 4 1157 310 119 348 26 chr17 75022794 75022906 -20249745 + B2_Mm2 SINE B2 47 194 -1 4 1157 216 0 0 0 chr17 75023613 75023637 -20249014 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1157 21 57 0 0 chr17 75024987 75025022 -20247629 + AT_rich Low_complexity Low_complexity 1 35 0 4 1157 827 270 11 11 chr17 75025295 75025475 -20247176 + B3 SINE B2 3 182 -34 4 1157 53 17 0 0 chr17 75025476 75025536 -20247115 + AT_rich Low_complexity Low_complexity 1 60 0 4 1157 996 61 0 0 chr17 75025963 75026094 -20246557 - B1_Mm SINE Alu 0 147 17 4 1157 420 193 25 0 chr17 75026668 75026787 -20245864 - Lx9 LINE L1 -2 7642 7521 5 1157 1901 185 61 29 chr17 75026874 75027330 -20245321 - Lx9 LINE L1 -396 7248 6778 5 1157 1039 233 126 11 chr17 75027322 75027600 -20245051 - Lx9 LINE L1 -1018 6626 6317 5 1157 456 19 0 0 chr17 75027641 75027694 -20244957 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1157 333 68 0 0 chr17 75027986 75028030 -20244621 + (T)n Simple_repeat Simple_repeat 1 44 0 5 1157 986 92 14 34 chr17 75028032 75028179 -20244472 - B1_Mm SINE Alu -3 144 1 5 1157 197 280 0 20 chr17 75029879 75029930 -20242721 - MER5B DNA MER1_type -123 55 6 5 1157 527 242 62 15 chr17 75031215 75031345 -20241306 + B1_Mur1 SINE Alu 5 140 -9 5 1157 254 134 7 167 chr17 75031417 75031500 -20241151 + B1F SINE Alu 49 149 0 5 1157 210 322 21 11 chr17 75031512 75031606 -20241045 + CT-rich Low_complexity Low_complexity 1 95 0 5 1157 306 0 0 0 chr17 75031629 75031663 -20240988 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1157 316 386 36 12 chr17 75031752 75031920 -20240731 - B4A SINE B4 -118 174 3 5 1157 632 230 145 28 chr17 75032449 75032628 -20240023 + B3 SINE B2 5 204 -12 6 1157 202 312 31 0 chr17 75032680 75032744 -20239907 + CT-rich Low_complexity Low_complexity 3 68 0 6 1157 192 111 0 0 chr17 75032807 75032843 -20239808 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 6 1157 706 82 21 63 chr17 75033551 75033694 -20238957 - L1_Mus3 LINE L1 -8 6630 6494 6 1157 295 255 21 114 chr17 75033839 75033946 -20238705 - B3A SINE B2 -32 184 89 6 1157 21 57 0 0 chr17 75034384 75034419 -20238232 + AT_rich Low_complexity Low_complexity 1 35 0 6 1157 21 0 0 0 chr17 75035080 75035101 -20237550 + AT_rich Low_complexity Low_complexity 1 21 0 6 1157 848 174 0 20 chr17 75035346 75035498 -20237153 - B1_Mur2 SINE Alu 0 149 1 6 1157 3757 205 88 27 chr17 75036091 75037012 -20235639 - Lx5 LINE L1 -3 7047 6071 6 1157 641 189 171 37 chr17 75037178 75037365 -20235286 - B3 SINE B2 -4 212 1 6 1157 902 141 0 40 chr17 75038119 75038267 -20234384 + B1_Mur4 SINE Alu 1 142 -8 7 1157 417 188 286 0 chr17 75038655 75038759 -20233892 - B2_Mm2 SINE B2 -66 150 9 7 1157 1178 54 0 0 chr17 75039818 75039965 -20232686 + B1_Mm SINE Alu 1 147 0 7 1157 359 316 75 8 chr17 75040026 75040160 -20232491 + B1_Mur2 SINE Alu 1 143 -6 7 1157 656 279 32 16 chr17 75040411 75040600 -20232051 - B3 SINE B2 -5 211 20 7 1157 201 39 0 0 chr17 75040756 75040782 -20231869 + (TCTG)n Simple_repeat Simple_repeat 4 29 0 7 1157 21 57 0 0 chr17 75040897 75040932 -20231719 + AT_rich Low_complexity Low_complexity 1 35 0 7 1157 189 147 0 0 chr17 75042955 75042989 -20229662 + (TCCC)n Simple_repeat Simple_repeat 4 37 0 7 1157 243 369 36 0 chr17 75043350 75043434 -20229217 + B1F1 SINE Alu 2 88 -61 7 1157 6294 63 95 1 chr17 75043451 75044315 -20228336 + L1_Mus3 LINE L1 5707 6637 -1 7 1157 1325 40 101 22 chr17 75044322 75044500 -20228151 + B2_Mm1a SINE B2 2 193 0 8 1157 578 179 0 0 chr17 75046172 75046267 -20226384 + B1_Mur2 SINE Alu 1 95 -54 8 1157 557 14 14 0 chr17 75046281 75046351 -20226300 + (CCA)n Simple_repeat Simple_repeat 2 72 0 8 1157 2532 143 38 0 chr17 75048440 75048867 -20223784 + Lx2 LINE L1 6555 6997 0 8 1157 22 0 0 0 chr17 75050413 75050435 -20222216 + AT_rich Low_complexity Low_complexity 1 22 0 8 1157 356 153 151 12 chr17 75050705 75050791 -20221860 - PB1D9 SINE Alu -21 99 2 8 1157 572 212 79 21 chr17 75050918 75051058 -20221593 - B1_Mur2 SINE Alu -1 148 1 8 1157 755 206 109 0 chr17 75051449 75051633 -20221018 - B3 SINE B2 -12 204 1 8 1157 731 260 38 24 chr17 75052152 75052365 -20220286 - B3 SINE B2 0 216 1 8 1157 654 234 0 7 chr17 75052774 75052916 -20219735 - B1_Mus2 SINE Alu -6 141 1 8 1157 1641 26 0 0 chr17 75055177 75055366 -20217285 - B2_Mm1a SINE B2 -4 189 1 9 1157 576 257 58 39 chr17 75055619 75055773 -20216878 + RSINE1 SINE B4 9 165 0 9 1157 250 210 35 58 chr17 75055920 75056006 -20216645 - B1F1 SINE Alu -63 86 3 9 1157 630 235 14 35 chr17 75056006 75056092 -20216559 - ID SINE ID -140 84 2 9 1157 33 19 0 36 chr17 75056136 75056170 -20216481 + AT_rich Low_complexity Low_complexity 1 34 0 9 1157 201 74 0 0 chr17 75056170 75056197 -20216454 + (TG)n Simple_repeat Simple_repeat 2 28 0 9 1157 279 0 0 0 chr17 75056197 75056228 -20216423 + (CA)n Simple_repeat Simple_repeat 2 32 0 9 1157 33 19 0 36 chr17 75056228 75056247 -20216404 + AT_rich Low_complexity Low_complexity 1 18 0 9 1157 197 296 39 78 chr17 75056495 75056572 -20216079 + MIRc SINE MIR 9 82 -186 9 1157 3521 60 5 0 chr17 75056670 75057119 -20215532 - L1_Mus1 LINE L1 0 6567 6117 9 1157 525 333 12 0 chr17 75057731 75057810 -20214841 + B4 SINE B4 6 86 -206 1 1157 243 281 28 103 chr17 75057810 75057917 -20214734 + B1F SINE Alu 1 99 -50 1 1157 455 161 23 11 chr17 75057961 75057974 -20214677 - B2_Mm1t SINE B2 -19 174 162 1 1157 180 0 0 0 chr17 75057974 75057994 -20214657 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 1 1157 455 161 23 11 chr17 75057994 75058068 -20214583 - B2_Mm1t SINE B2 -32 161 87 1 1157 468 0 0 0 chr17 75058093 75058145 -20214506 + (TTTA)n Simple_repeat Simple_repeat 3 54 0 1 1157 1236 64 0 0 chr17 75058146 75058303 -20214348 - B2_Mm2 SINE B2 -37 158 2 1 1157 228 35 0 0 chr17 75058375 75058404 -20214247 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1157 372 22 0 0 chr17 75058412 75058457 -20214194 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1157 258 318 18 45 chr17 75059194 75059306 -20213345 + PB1D10 SINE Alu 2 110 -7 1 1157 306 0 0 0 chr17 75059309 75059343 -20213308 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1157 295 331 31 24 chr17 75060513 75060640 -20212011 + ID_B1 SINE B4 81 208 -16 1 1157 1212 61 31 0 chr17 75060756 75060919 -20211732 + B2_Mm2 SINE B2 28 195 0 1 1157 227 162 40 26 chr17 75061086 75061162 -20211489 + (TTATA)n Simple_repeat Simple_repeat 1 77 0 1 1157 372 257 26 71 chr17 75061565 75061678 -20210973 + PB1D9 SINE Alu 13 120 0 1 1157 857 184 89 37 chr17 75062184 75062398 -20210253 - URR1B DNA MER1_type 0 225 1 1 1157 759 267 28 19 chr17 75062590 75062804 -20209847 + B3 SINE B2 1 216 0 1 1157 402 307 91 73 chr17 75063060 75063147 -20209504 + B4A SINE B4 8 106 -186 1 1157 1125 49 0 7 chr17 75063147 75063286 -20209365 + B1_Mus2 SINE Alu 1 139 -8 1 1157 207 0 0 0 chr17 75063286 75063309 -20209342 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1157 402 307 91 73 chr17 75063309 75063457 -20209194 + B4A SINE B4 107 242 -50 1 1157 373 242 0 0 chr17 75063500 75063591 -20209060 - L1MA5 LINE L1 -36 6264 6174 1 1157 213 247 14 23 chr17 75063714 75063802 -20208849 + PB1D10 SINE Alu 1 91 -58 1 1157 374 331 64 7 chr17 75063878 75064018 -20208633 + RSINE1 SINE B4 6 153 -12 1 1157 269 210 21 0 chr17 75064126 75064174 -20208477 - B1_Mur2 SINE Alu -21 106 62 1 1157 568 165 144 25 chr17 75064275 75064393 -20208258 - B1_Mur3 SINE Alu -17 132 1 1 1157 498 17 0 0 chr17 75064639 75064698 -20207953 + (GA)n Simple_repeat Simple_repeat 1 59 0 1 1157 270 0 0 0 chr17 75064698 75064728 -20207923 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1157 823 255 30 40 chr17 75064728 75064928 -20207723 - B3 SINE B2 -13 203 6 1 1157 571 160 8 138 chr17 75064990 75065113 -20207538 - B1_Mur1 SINE Alu 0 149 43 1 1157 23 0 0 0 chr17 75065449 75065472 -20207179 + AT_rich Low_complexity Low_complexity 1 23 0 1 1157 323 237 0 0 chr17 75065511 75065570 -20207081 - RSINE1 SINE B4 -96 69 11 1 1157 23 0 0 0 chr17 75065585 75065608 -20207043 + AT_rich Low_complexity Low_complexity 1 23 0 1 1157 2513 182 50 4 chr17 75066217 75066741 -20205910 - Lx5 LINE L1 -441 6609 6062 1 1157 1030 124 81 0 chr17 75066764 75066949 -20205702 - Lx5 LINE L1 -1068 5982 5783 1 1157 898 52 0 0 chr17 75066965 75067081 -20205570 - B1_Mus1 SINE Alu 0 148 33 1 1157 1440 114 220 10 chr17 75067083 75067383 -20205268 - Lx5 LINE L1 -91 5786 5424 1 1157 193 146 20 20 chr17 75067558 75067607 -20205044 + CT-rich Low_complexity Low_complexity 6 54 0 1 1157 567 94 0 0 chr17 75067642 75067738 -20204913 + (TG)n Simple_repeat Simple_repeat 2 97 0 1 1157 337 306 81 0 chr17 75067829 75068015 -20204636 - L1M4 LINE L1 -410 5764 5564 1 1157 238 294 72 18 chr17 75068328 75068351 -20204300 - PB1D10 SINE Alu 0 117 42 1 1157 266 269 26 0 chr17 75068351 75068429 -20204222 - ID_B1 SINE B4 -54 170 91 1 1157 275 246 40 14 chr17 75068895 75068969 -20203682 + ID4_ SINE ID 2 77 -6 1 1157 244 316 64 50 chr17 75069275 75069415 -20203236 + ID_B1 SINE B4 82 223 -1 1 1157 222 302 113 80 chr17 75070055 75070206 -20202445 - RSINE1 SINE B4 0 165 10 1 1157 303 295 166 6 chr17 75070210 75070367 -20202284 - L1M4 LINE L1 -730 5444 5263 1 1157 203 224 0 65 chr17 75070497 75070559 -20202092 + (TATG)n Simple_repeat Simple_repeat 1 58 0 1 1157 366 260 239 5 chr17 75070947 75071156 -20201495 - L1M2 LINE L1 -743 5400 5143 1 1157 851 284 9 9 chr17 75071186 75071396 -20201255 + B3 SINE B2 1 210 -6 1 1157 22 0 0 0 chr17 75071398 75071420 -20201231 + AT_rich Low_complexity Low_complexity 1 22 0 1 1157 1162 82 0 0 chr17 75071422 75071569 -20201082 + B1_Mus2 SINE Alu 1 147 0 1 1157 183 42 0 0 chr17 75071649 75071673 -20200978 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 1157 339 250 69 0 chr17 75071759 75071875 -20200776 + L1MA4 LINE L1 5805 5928 -372 1 1157 395 354 21 7 chr17 75071889 75072034 -20200617 + B3 SINE B2 16 162 -54 1 1157 375 229 20 40 chr17 75072381 75072399 -20200252 - B1_Mur3 SINE Alu 0 149 132 1 1157 207 0 0 0 chr17 75072399 75072422 -20200229 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 1157 375 215 9 17 chr17 75072422 75072508 -20200143 - B1_Mur3 SINE Alu -18 131 47 1 1157 229 265 88 39 chr17 75073179 75073281 -20199370 - PB1D7 SINE Alu -3 117 11 1 1157 410 332 91 5 chr17 75073556 75073765 -20198886 - L1MD3 LINE L1 -215 7780 7554 1 1157 1537 243 277 13 chr17 75073787 75074285 -20198366 - Lx8 LINE L1 -226 7247 6629 1 1157 1460 51 6 0 chr17 75074285 75074461 -20198190 + B2_Mm1t SINE B2 2 178 -15 1 1157 282 29 0 0 chr17 75074462 75074497 -20198154 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1 1157 1537 265 126 29 chr17 75074497 75074880 -20197771 - Lx8 LINE L1 -845 6628 6195 1 1157 210 37 0 0 chr17 75074894 75074921 -20197730 + (TTG)n Simple_repeat Simple_repeat 3 29 0 1 1157 348 245 32 11 chr17 75075247 75075342 -20197309 - ID_B1 SINE B4 -16 208 112 1 1157 360 143 0 0 chr17 75075405 75075475 -20197176 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 1157 450 283 38 88 chr17 75075478 75075637 -20197014 - RSINE1 SINE B4 -11 154 4 1 1157 719 216 124 16 chr17 75079901 75080094 -20192557 - B3 SINE B2 0 216 3 1 1157 559 282 63 114 chr17 75080525 75080662 -20191989 + L1_Rod LINE L1 5291 5427 -420 1 1157 914 129 20 13 chr17 75080662 75080811 -20191840 + B1_Mur4 SINE Alu 1 150 0 1 1157 559 282 63 114 chr17 75080811 75081127 -20191524 + L1_Rod LINE L1 5428 5712 -135 1 1157 225 0 0 0 chr17 75081127 75081152 -20191499 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 1157 393 58 0 0 chr17 75081158 75081210 -20191441 + (CATA)n Simple_repeat Simple_repeat 3 54 0 1 1157 559 282 63 114 chr17 75081210 75081272 -20191379 + L1_Rod LINE L1 5719 5785 -62 1 1157 517 178 164 33 chr17 75081379 75081501 -20191150 - RMER15 LTR ERVL 0 575 438 1 1157 303 49 0 0 chr17 75081530 75081571 -20191080 + (T)n Simple_repeat Simple_repeat 1 41 0 1 1157 1184 61 0 0 chr17 75081571 75081718 -20190933 - B1_Mus1 SINE Alu 0 148 2 1 1157 724 216 33 22 chr17 75081726 75081917 -20190734 - B3 SINE B2 0 195 2 1 1157 2028 152 154 2 chr17 75081917 75082314 -20190337 - RMER15 LTR ERVL -109 466 10 1 1157 269 214 134 80 chr17 75082544 75082656 -20189995 - PB1D9 SINE Alu -1 119 2 1 1157 248 219 0 0 chr17 75082731 75082772 -20189879 + B3A SINE B2 1 41 -157 1 1157 804 179 21 0 chr17 75082773 75082913 -20189738 + B1_Mur4 SINE Alu 3 145 -5 1 1157 423 301 68 0 chr17 75083024 75083157 -20189494 + B3 SINE B2 72 213 -3 1 1157 195 42 0 0 chr17 75083800 75083824 -20188827 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1 1157 285 154 0 0 chr17 75084093 75084145 -20188506 - PB1D9 SINE Alu -23 97 46 1 1157 270 365 30 30 chr17 75085085 75085249 -20187402 - RSINE1 SINE B4 0 165 2 1 1157 196 91 22 22 chr17 75085253 75085298 -20187353 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 1 1157 1421 64 21 0 chr17 75086604 75086792 -20185859 + B2_Mm2 SINE B2 2 193 -2 1 1157 459 0 0 0 chr17 75086793 75086844 -20185807 + (GGAA)n Simple_repeat Simple_repeat 4 54 0 1 1157 820 164 14 0 chr17 75087442 75087588 -20185063 + B1_Mur3 SINE Alu 1 148 -1 1 1157 949 115 73 17 chr17 75088892 75089069 -20183582 + B2_Mm2 SINE B2 1 187 -8 1 1157 667 222 59 0 chr17 75089117 75089252 -20183399 + B1_Mur1 SINE Alu 2 144 -5 1 1157 239 346 29 0 chr17 75089891 75089995 -20182656 + PB1D10 SINE Alu 1 107 -10 1 1157 241 222 19 0 chr17 75090175 75090229 -20182422 - ID4_ SINE ID -3 80 26 1 1157 474 221 22 16 chr17 75091260 75091375 -20181276 - B1_Mus1 SINE Alu -6 114 2 1 1157 321 243 43 18 chr17 75092097 75092223 -20180428 + B2_Mm2 SINE B2 1 130 -86 1 1157 616 294 41 32 chr17 75092358 75092579 -20180072 + ID_B1 SINE B4 2 224 0 1 1157 656 179 46 46 chr17 75093300 75093314 -20179337 + ID_B1 SINE B4 73 222 0 1 1157 1107 37 0 0 chr17 75093314 75093450 -20179201 + B1_Mus2 SINE Alu 12 147 0 1 1157 3129 109 117 13 chr17 75093850 75094390 -20178261 - Lx2 LINE L1 -61 6936 6341 1 1157 246 128 0 0 chr17 75094393 75094432 -20178219 + (T)n Simple_repeat Simple_repeat 1 39 0 1 1157 417 239 53 9 chr17 75094465 75094579 -20178072 - PB1D9 SINE Alu -1 119 1 1 1157 1196 54 0 0 chr17 75094759 75094906 -20177745 + B1_Mus1 SINE Alu 1 147 -1 1 1157 524 154 55 0 chr17 75094992 75095102 -20177549 + L1_Mur2 LINE L1 4957 5072 -805 1 1157 269 222 0 0 chr17 75095102 75095156 -20177495 + B1_Mur1 SINE Alu 83 136 -13 1 1157 269 384 0 0 chr17 75095256 75095355 -20177296 - B1F SINE Alu -6 143 45 1 1157 495 258 130 23 chr17 75096033 75096164 -20176487 + RSINE1 SINE B4 15 159 -6 1 1157 24 53 0 0 chr17 75096164 75096202 -20176449 + AT_rich Low_complexity Low_complexity 1 38 0 1 1157 25 0 0 0 chr17 75096234 75096259 -20176392 + AT_rich Low_complexity Low_complexity 1 25 0 1 1157 314 260 139 10 chr17 75096302 75096403 -20176248 - B3A SINE B2 -84 114 1 1 1157 4029 181 43 15 chr17 75097082 75097899 -20174752 - Lx5 LINE L1 -76 6974 6135 1 1157 402 175 125 10 chr17 75099652 75099756 -20172895 - B1_Mur1 SINE Alu 0 149 34 2 1157 587 245 95 7 chr17 75100196 75100344 -20172307 + RSINE1 SINE B4 2 162 -3 2 1157 231 114 0 0 chr17 75100997 75101032 -20171619 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 2 1157 1139 56 28 0 chr17 75101032 75101175 -20171476 - B1_Mus2 SINE Alu 0 147 1 2 1157 761 164 0 0 chr17 75101259 75101375 -20171276 - B3 SINE B2 -100 116 1 2 1157 234 0 0 0 chr17 75102039 75102065 -20170586 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1157 290 267 0 26 chr17 75102857 75102934 -20169717 + B1_Mur2 SINE Alu 75 149 0 2 1157 1527 47 0 30 chr17 75103706 75103904 -20168747 + B2_Mm1t SINE B2 2 193 0 2 1157 792 142 29 15 chr17 75103941 75104077 -20168574 + B1_Mus2 SINE Alu 10 147 0 2 1157 195 42 0 0 chr17 75104130 75104154 -20168497 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 144 1627 26 0 20 chr17 75104255 75104452 -20168199 + B2_Mm1a SINE B2 1 193 0 2 1158 384 22 0 0 chr17 75104466 75104511 -20168140 + (A)n Simple_repeat Simple_repeat 1 45 0 2 1158 438 258 72 0 chr17 75104586 75104683 -20167968 + RSINE1 SINE B4 5 108 -57 2 1158 199 156 133 0 chr17 75104919 75104964 -20167687 - L2b LINE L2 -220 3155 3105 2 1158 1135 75 0 0 chr17 75105347 75105493 -20167158 + B1_Mus2 SINE Alu 2 147 0 2 1158 297 0 0 0 chr17 75105641 75105674 -20166977 + (A)n Simple_repeat Simple_repeat 1 33 0 2 1158 742 249 51 28 chr17 75105737 75105941 -20166710 + B3 SINE B2 2 213 -3 2 1158 812 138 62 0 chr17 75106450 75106595 -20166056 - URR1A DNA MER1_type 0 226 73 2 1158 671 276 52 17 chr17 75106642 75106837 -20165814 + B3A SINE B2 1 187 -8 2 1158 536 200 73 0 chr17 75106848 75106958 -20165693 + B1_Mus2 SINE Alu 1 118 -29 2 1158 375 235 9 81 chr17 75106882 75106993 -20165658 + MT2B LTR ERVL 194 296 -305 2 1158 614 296 72 80 chr17 75107379 75107728 -20164923 + MTE2a LTR MaLR 34 379 0 2 1158 397 174 152 65 chr17 75108098 75108190 -20164461 + B1_Mur4 SINE Alu 10 139 -11 2 1158 612 197 180 25 chr17 75108292 75108453 -20164198 - B3 SINE B2 -30 186 1 2 1158 627 215 11 6 chr17 75109020 75109198 -20163453 + (TA)n Simple_repeat Simple_repeat 2 180 0 2 1158 252 149 0 0 chr17 75109303 75109350 -20163301 + (TCC)n Simple_repeat Simple_repeat 3 49 0 2 1158 268 232 136 39 chr17 75109378 75109481 -20163170 - PB1D9 SINE Alu -7 113 1 2 1158 230 319 174 17 chr17 75109521 75109636 -20163015 - Lx8 LINE L1 -187 7286 7154 2 1158 287 225 50 112 chr17 75109636 75109716 -20162935 - PB1 SINE Alu -40 109 35 2 1158 656 222 51 51 chr17 75110799 75110994 -20161657 - B3A SINE B2 0 198 4 2 1158 26 0 0 0 chr17 75111902 75111928 -20160723 + AT_rich Low_complexity Low_complexity 1 26 0 2 1158 474 200 0 0 chr17 75112043 75112123 -20160528 + ID4 SINE ID 2 81 -2 2 1158 2857 121 66 21 chr17 75112458 75113008 -20159643 - RMER6A LTR ERVK -1 755 184 2 1158 1174 63 0 0 chr17 75113008 75113151 -20159500 + B1_Mus1 SINE Alu 5 147 -1 2 1158 2008 137 91 143 chr17 75113151 75113300 -20159351 - RMER6A LTR ERVK -498 192 111 2 1158 1912 176 36 11 chr17 75113333 75113694 -20158957 - RMER6-int LTR ERVK -2 3175 2806 2 1158 546 250 135 0 chr17 75113694 75113850 -20158801 + B3 SINE B2 29 205 -11 2 1158 565 212 0 25 chr17 75113875 75113996 -20158655 + RSINE1 SINE B4 3 120 -45 2 1158 198 67 0 0 chr17 75114133 75114145 -20158506 + (CAAAT)n Simple_repeat Simple_repeat 2 13 0 2 1158 1661 21 0 0 chr17 75114145 75114332 -20158319 + B2_Mm1a SINE B2 2 188 -5 2 1158 198 67 0 0 chr17 75114332 75114349 -20158302 + (CAAAT)n Simple_repeat Simple_repeat 4 20 0 2 1158 2014 231 29 78 chr17 75114493 75115047 -20157604 + RMER1B Other Other 8 534 -532 2 1158 2082 204 59 19 chr17 75115072 75115496 -20157155 + RMER1A Other Other 2 442 -588 2 1158 801 167 13 34 chr17 75115531 75115680 -20156971 + B1_Mus2 SINE Alu 1 146 -1 2 1158 381 216 135 19 chr17 75115751 75115855 -20156796 + B1_Mur1 SINE Alu 31 146 -3 2 1158 757 144 27 14 chr17 75116334 75116475 -20156176 - B1_Mur4 SINE Alu 0 150 6 2 1158 518 231 219 0 chr17 75116475 75116644 -20156007 - B3 SINE B2 -6 210 5 2 1158 305 271 35 0 chr17 75116646 75116731 -20155920 - B1F SINE Alu -38 111 24 2 1158 297 0 0 0 chr17 75117650 75117683 -20154968 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1158 185 94 0 30 chr17 75117763 75117796 -20154855 + (CAT)n Simple_repeat Simple_repeat 2 33 0 2 1158 949 250 21 0 chr17 75118194 75118386 -20154265 + B3 SINE B2 1 196 -20 2 1158 183 80 0 0 chr17 75118392 75118417 -20154234 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 2 1158 636 178 46 15 chr17 75118684 75118815 -20153836 - B1_Mur4 SINE Alu 0 150 16 2 1158 290 404 7 5 chr17 75119325 75119473 -20153178 - PB1D10 SINE Alu 0 149 1 2 1158 378 229 55 0 chr17 75119592 75119701 -20152950 - PB1D10 SINE Alu -2 115 1 2 1158 271 263 39 135 chr17 75119884 75120055 -20152596 + MER3 DNA MER1_type 3 149 -60 2 1158 891 168 161 5 chr17 75120055 75120241 -20152410 - B3 SINE B2 0 216 2 2 1158 271 263 39 135 chr17 75120241 75120298 -20152353 + MER3 DNA MER1_type 150 209 0 2 1158 1506 238 45 45 chr17 75120421 75120840 -20151811 + MTD LTR MaLR 1 419 0 2 1158 222 108 0 26 chr17 75121074 75121104 -20151547 + B1_Mus2 SINE Alu 1 29 -118 2 1158 830 135 0 41 chr17 75121104 75121251 -20151400 + B1_Mus1 SINE Alu 3 143 -5 2 1158 312 247 48 126 chr17 75121112 75121279 -20151372 + B4A SINE B4 95 248 -44 2 1158 225 372 9 47 chr17 75121618 75121725 -20150926 - PB1 SINE Alu -17 110 8 2 1158 209 299 26 0 chr17 75121769 75121846 -20150805 + (TATG)n Simple_repeat Simple_repeat 2 80 0 2 1158 222 209 0 0 chr17 75121786 75121829 -20150822 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1158 855 195 132 0 chr17 75121919 75122109 -20150542 - B3 SINE B2 0 216 2 2 1158 667 288 43 47 chr17 75122109 75122342 -20150309 - B4A SINE B4 -60 232 1 2 1158 25 0 0 0 chr17 75122356 75122381 -20150270 + GC_rich Low_complexity Low_complexity 1 25 0 2 1158 724 187 0 0 chr17 75122560 75122699 -20149952 - B1_Mur2 SINE Alu -9 140 2 2 1158 808 162 234 0 chr17 75123040 75123207 -20149444 + B3 SINE B2 1 206 -10 2 1158 279 0 0 0 chr17 75123211 75123242 -20149409 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2 1158 1207 41 7 0 chr17 75123445 75123591 -20149060 - B1_Mus1 SINE Alu 0 148 2 2 1158 265 333 0 0 chr17 75123635 75123704 -20148947 - FLAM_A SINE Alu -217 78 10 2 1158 555 182 0 0 chr17 75124304 75124430 -20148221 + (TG)n Simple_repeat Simple_repeat 2 127 0 2 1158 740 201 50 0 chr17 75124820 75124959 -20147692 + B1_Mus2 SINE Alu 2 147 0 2 1158 485 206 0 0 chr17 75125526 75125623 -20147028 - B3 SINE B2 -119 97 1 2 1158 228 35 0 0 chr17 75125662 75125691 -20146960 + (T)n Simple_repeat Simple_repeat 1 29 0 2 1158 1223 54 0 0 chr17 75125691 75125838 -20146813 - B1_Mus2 SINE Alu 0 147 1 2 1158 322 301 10 41 chr17 75125932 75126029 -20146622 - B3A SINE B2 -102 96 3 2 1158 239 282 28 0 chr17 75126122 75126193 -20146458 - BC1_Mm scRNA scRNA -68 84 12 2 1158 285 250 20 30 chr17 75126823 75126922 -20145729 + BC1_Mm scRNA scRNA 9 106 -46 2 1158 400 214 17 127 chr17 75127565 75127683 -20144968 - B1F1 SINE Alu -15 133 28 2 1158 533 189 66 0 chr17 75128134 75128240 -20144411 - B1_Mus2 SINE Alu 0 147 35 2 1158 401 273 53 59 chr17 75128249 75128401 -20144250 - B4A SINE B4 -60 232 82 2 1158 256 180 49 0 chr17 75128422 75128483 -20144168 + CT-rich Low_complexity Low_complexity 1 64 0 2 1158 276 30 0 0 chr17 75128483 75128516 -20144135 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1158 468 269 70 21 chr17 75128516 75128702 -20143949 - B4A SINE B4 -96 196 2 2 1158 783 104 167 0 chr17 75128912 75129056 -20143595 - B2_Mm2 SINE B2 -23 172 5 2 1158 378 301 37 49 chr17 75129364 75129528 -20143123 - RSINE1 SINE B4 0 165 4 2 1158 404 235 40 10 chr17 75129538 75129637 -20143014 - B1F1 SINE Alu -7 142 41 2 1158 579 67 11 0 chr17 75129670 75129759 -20142892 - L1_Mus3 LINE L1 -3 6635 6546 2 1158 388 277 10 28 chr17 75130062 75130182 -20142469 + B1_Mur2 SINE Alu 2 108 -12 2 1158 820 140 22 7 chr17 75130199 75130336 -20142315 - B1_Mur4 SINE Alu -11 139 1 2 1158 428 208 19 68 chr17 75130372 75130389 -20142262 - PB1D9 SINE Alu 0 120 108 2 1158 297 128 0 0 chr17 75130389 75130436 -20142215 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 2 1158 428 208 19 68 chr17 75130436 75130521 -20142130 - PB1D9 SINE Alu -13 107 23 2 1158 1489 37 26 16 chr17 75130535 75130725 -20141926 - B2_Mm1a SINE B2 0 193 2 2 1158 305 239 217 66 chr17 75131278 75131430 -20141221 + B2_Mm2 SINE B2 2 176 -19 2 1158 295 379 24 0 chr17 75132117 75132241 -20140410 + PB1 SINE Alu 1 127 0 2 1158 858 200 20 39 chr17 75132322 75132525 -20140126 - B3 SINE B2 -5 211 13 2 1158 314 395 6 12 chr17 75132860 75133029 -20139622 + Tigger10 DNA Tigger 1544 1711 -132 2 1158 23 54 0 0 chr17 75133569 75133606 -20139045 + AT_rich Low_complexity Low_complexity 1 37 0 2 1158 925 84 96 13 chr17 75133607 75133763 -20138888 + B2_Mm2 SINE B2 1 169 -26 2 1158 285 125 0 0 chr17 75133802 75133858 -20138793 + (G)n Simple_repeat Simple_repeat 1 56 0 2 1158 333 47 0 0 chr17 75135401 75135444 -20137207 + (GA)n Simple_repeat Simple_repeat 2 44 0 3 1158 234 241 127 85 chr17 75135669 75135787 -20136864 - RLTR17 LTR ERVK -83 609 487 3 1158 2007 115 80 10 chr17 75135792 75136178 -20136473 - RLTR31_Mm LTR ERVK -148 413 1 3 1158 234 271 71 0 chr17 75137267 75137337 -20135314 - ID4_ SINE ID -6 77 3 3 1158 259 241 0 0 chr17 75137820 75137878 -20134773 - RSINE1 SINE B4 -33 132 75 3 1158 1096 122 0 0 chr17 75138011 75138158 -20134493 + B1_Mus1 SINE Alu 1 147 -1 3 1158 350 235 0 0 chr17 75138345 75138413 -20134238 - RSINE1 SINE B4 -96 69 2 3 1158 24 67 0 0 chr17 75139479 75139524 -20133127 + AT_rich Low_complexity Low_complexity 1 45 0 3 1158 971 157 206 11 chr17 75139781 75139961 -20132690 + B3 SINE B2 2 216 0 3 1158 573 186 0 0 chr17 75139972 75140069 -20132582 + B1_Mus1 SINE Alu 19 115 -33 3 1158 274 156 31 0 chr17 75140069 75140133 -20132518 + GA-rich Low_complexity Low_complexity 2 67 0 3 1158 192 135 0 0 chr17 75140247 75140284 -20132367 + (AGGGGG)n Simple_repeat Simple_repeat 3 39 0 3 1158 1354 108 5 0 chr17 75140661 75140855 -20131796 - B2_Mm2 SINE B2 0 195 1 3 1158 188 368 37 19 chr17 75142061 75142169 -20130482 + MIRc SINE MIR 46 155 -113 3 1158 361 276 0 0 chr17 75142651 75142738 -20129913 - PB1D10 SINE Alu 0 117 31 3 1158 772 227 113 0 chr17 75143551 75143745 -20128906 - B3 SINE B2 0 216 1 3 1158 1747 171 101 16 chr17 75143959 75144334 -20128317 - MTB_Mm LTR MaLR 0 407 1 3 1158 227 31 31 0 chr17 75144708 75144740 -20127911 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1158 245 194 10 58 chr17 75144782 75144886 -20127765 - MT2A LTR ERVL 0 533 435 3 1158 345 277 36 51 chr17 75144897 75145034 -20127617 - L1_Mur3 LINE L1 -2168 3972 3838 3 1158 718 275 75 7 chr17 75145034 75145312 -20127339 - RMER15 LTR ERVL 0 575 279 3 1158 2131 148 125 79 chr17 75145341 75145870 -20126781 - RLTR31_Mur LTR ERVK 0 553 1 3 1158 691 228 7 27 chr17 75146636 75146785 -20125866 + B1_Mur1 SINE Alu 4 149 0 3 1158 276 91 0 0 chr17 75146905 75146949 -20125702 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 3 1158 540 280 90 26 chr17 75147350 75147618 -20125033 - B4A SINE B4 -4 288 4 3 1158 558 67 0 0 chr17 75147694 75147769 -20124882 + (CA)n Simple_repeat Simple_repeat 2 76 0 3 1158 950 75 0 0 chr17 75147788 75147921 -20124730 - B1_Mus2 SINE Alu 0 147 15 3 1158 860 172 207 0 chr17 75147923 75148097 -20124554 + B3 SINE B2 1 210 -6 3 1158 397 50 33 0 chr17 75148490 75148550 -20124101 + (GGGAGA)n Simple_repeat Simple_repeat 3 64 0 3 1158 278 279 23 11 chr17 75148625 75148712 -20123939 + B1F1 SINE Alu 60 147 -2 3 1158 244 301 96 0 chr17 75148803 75148886 -20123765 + B3A SINE B2 100 190 -8 3 1158 27 29 0 0 chr17 75148892 75148926 -20123725 + AT_rich Low_complexity Low_complexity 1 34 0 3 1158 711 232 65 30 chr17 75149046 75149246 -20123405 - B3 SINE B2 -7 209 3 3 1158 376 324 0 0 chr17 75149260 75149368 -20123283 - PB1D7 SINE Alu -7 113 6 3 1158 1641 21 0 21 chr17 75151128 75151321 -20121330 + B2_Mm1a SINE B2 1 189 -4 3 1158 286 228 0 17 chr17 75151339 75151397 -20121254 + B3A SINE B2 70 126 -72 3 1158 231 114 0 0 chr17 75151401 75151436 -20121215 + (A)n Simple_repeat Simple_repeat 1 35 0 3 1158 648 194 4 0 chr17 75151549 75151687 -20120964 - B1_Mm SINE Alu -1 148 6 3 1158 259 345 17 26 chr17 75151608 75151724 -20120927 - B4A SINE B4 -121 171 57 3 1158 653 245 57 24 chr17 75153000 75153209 -20119442 + ID_B1 SINE B4 4 219 -5 3 1158 496 278 118 18 chr17 75153575 75153690 -20118961 + MER2 DNA MER2_type 102 222 -123 3 1158 1252 66 58 42 chr17 75153690 75153879 -20118772 + B2_Mm2 SINE B2 2 193 -2 3 1158 496 278 118 18 chr17 75153879 75153983 -20118668 + MER2 DNA MER2_type 223 343 -2 3 1158 396 0 0 0 chr17 75154743 75154787 -20117864 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1158 216 256 63 11 chr17 75154787 75154877 -20117774 - B1F SINE Alu -1 116 28 3 1158 27 29 0 0 chr17 75154905 75154939 -20117712 + AT_rich Low_complexity Low_complexity 1 34 0 3 1158 40 0 0 0 chr17 75155113 75155153 -20117498 + AT_rich Low_complexity Low_complexity 1 40 0 3 1158 391 287 73 16 chr17 75155683 75155807 -20116844 - ID_B1 SINE B4 -8 216 86 3 1158 592 171 94 0 chr17 75156003 75156120 -20116531 + B1_Mur2 SINE Alu 1 128 -21 3 1158 312 27 0 0 chr17 75156309 75156346 -20116305 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 1158 1164 85 98 0 chr17 75156359 75156523 -20116128 - B2_Mm2 SINE B2 -14 181 2 3 1158 860 141 35 0 chr17 75156780 75156922 -20115729 + B1_Mus2 SINE Alu 1 147 0 3 1158 21 36 0 0 chr17 75157275 75157303 -20115348 + AT_rich Low_complexity Low_complexity 1 28 0 3 1158 207 0 0 0 chr17 75157525 75157548 -20115103 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1158 2377 89 16 22 chr17 75158410 75158779 -20113872 - IAPLTR1_Mm LTR ERVK 0 367 1 3 1158 56375 27 8 8 chr17 75158781 75165249 -20107402 - IAPEz-int LTR ERVK -2 6479 8 3 1158 2377 89 16 22 chr17 75165249 75165618 -20107033 - IAPLTR1_Mm LTR ERVK 0 367 1 3 1158 309 121 0 16 chr17 75166710 75166772 -20105879 - ORR1B1 LTR MaLR -2 392 322 3 1158 754 153 191 17 chr17 75166777 75166950 -20105701 - ORR1B1 LTR MaLR -191 203 1 3 1158 192 77 0 0 chr17 75166950 75166976 -20105675 + (CAT)n Simple_repeat Simple_repeat 2 27 0 3 1158 322 246 23 136 chr17 75166998 75167130 -20105521 - RSINE1 SINE B4 0 165 49 3 1158 281 318 68 84 chr17 75167416 75167831 -20104820 - Charlie11 DNA MER1_type -104 2092 1685 3 1158 312 259 73 73 chr17 75167914 75168093 -20104558 + L1MB2 LINE L1 5930 6108 -63 3 1158 185 0 0 39 chr17 75168120 75168146 -20104505 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 3 1158 1044 119 0 0 chr17 75168146 75168297 -20104354 - B2_Mm2 SINE B2 -43 152 2 3 1158 301 301 76 6 chr17 75168389 75168546 -20104105 + L1M5 LINE L1 4378 4545 -1601 3 1158 199 289 31 55 chr17 75168838 75168966 -20103685 + MER5A DNA MER1_type 61 185 -4 3 1158 1801 188 50 6 chr17 75170933 75171296 -20101355 + ORR1C2 LTR MaLR 5 383 -1 3 1158 1973 189 68 47 chr17 75171378 75171954 -20100697 - L1_Rod LINE L1 -515 5332 4745 3 1158 489 218 152 13 chr17 75173377 75173535 -20099116 + B3 SINE B2 12 191 -25 3 1158 790 147 21 0 chr17 75174236 75174379 -20098272 + URR1A DNA MER1_type 81 226 0 3 1158 407 68 0 17 chr17 75174762 75174822 -20097829 + (TCCC)n Simple_repeat Simple_repeat 3 61 0 3 1158 499 272 83 108 chr17 75175139 75175501 -20097150 - ORR1E LTR MaLR -6 353 1 3 1158 33 25 0 0 chr17 75175569 75175609 -20097042 + AT_rich Low_complexity Low_complexity 1 40 0 3 1158 749 191 7 49 chr17 75175745 75175888 -20096763 + B1_Mur3 SINE Alu 1 137 -12 3 1158 243 88 0 0 chr17 75175901 75175935 -20096716 + (GAAA)n Simple_repeat Simple_repeat 1 34 0 3 1158 288 250 24 59 chr17 75176000 75176085 -20096566 + B4A SINE B4 88 169 -123 3 1158 428 204 23 0 chr17 75176020 75176108 -20096543 + PB1D9 SINE Alu 18 107 -13 3 1158 180 0 0 0 chr17 75177428 75177448 -20095203 + (GA)n Simple_repeat Simple_repeat 1 20 0 3 1158 212 305 0 0 chr17 75177637 75177719 -20094932 + (TG)n Simple_repeat Simple_repeat 1 82 0 3 1158 482 269 123 18 chr17 75177720 75177883 -20094768 - B3A SINE B2 -17 181 2 3 1158 212 154 0 0 chr17 75177963 75178002 -20094649 + A-rich Low_complexity Low_complexity 2 40 0 3 1158 369 216 80 0 chr17 75178254 75178342 -20094309 - PB1D9 SINE Alu -9 111 17 3 1158 461 221 172 0 chr17 75179305 75179427 -20093224 - B1_Mur2 SINE Alu -2 147 5 3 1158 949 231 19 0 chr17 75180823 75181031 -20091620 - B3 SINE B2 -4 212 1 3 1158 202 281 0 0 chr17 75181165 75181222 -20091429 + T-rich Low_complexity Low_complexity 4 60 0 3 1158 1404 139 90 43 chr17 75181222 75181500 -20091151 - RMER1B Other Other -11 1055 765 3 1158 207 161 177 0 chr17 75181726 75181788 -20090863 + MIR SINE MIR 68 140 -122 3 1158 494 318 140 33 chr17 75181900 75182264 -20090387 + Kanga1 DNA Tc2 37 439 -1306 3 1158 1363 81 27 0 chr17 75182265 75182450 -20090201 + B2_Mm2 SINE B2 2 191 -4 3 1158 499 212 0 39 chr17 75182477 75182580 -20090071 + PB1D9 SINE Alu 2 100 -20 3 1158 198 0 0 0 chr17 75182777 75182799 -20089852 + (TTA)n Simple_repeat Simple_repeat 1 22 0 3 1158 898 257 5 23 chr17 75182968 75183183 -20089468 - B3 SINE B2 -1 215 5 3 1158 1024 45 0 89 chr17 75183510 75183656 -20088995 + B1_Mus2 SINE Alu 3 135 -12 3 1158 293 0 27 0 chr17 75183656 75183693 -20088958 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 3 1158 748 265 5 10 chr17 75183838 75184040 -20088611 - B3 SINE B2 -11 205 5 3 1158 587 215 112 35 chr17 75186266 75186435 -20086216 - B3A SINE B2 -16 182 1 3 1158 399 194 6 35 chr17 75187602 75187694 -20084957 + PB1D7 SINE Alu 23 117 -10 3 1158 21 36 0 0 chr17 75187852 75187880 -20084771 + AT_rich Low_complexity Low_complexity 1 28 0 3 1158 402 100 0 0 chr17 75188656 75188716 -20083935 + (TG)n Simple_repeat Simple_repeat 2 61 0 3 1158 548 343 76 48 chr17 75189102 75189497 -20083154 - MLT2E LTR ERVL -114 514 109 3 1158 246 239 183 0 chr17 75189941 75190012 -20082639 - ORR1E LTR MaLR -247 112 29 3 1158 610 68 11 11 chr17 75190013 75190102 -20082549 + L1VL1 LINE L1 163 251 -6171 3 1158 14097 61 11 1 chr17 75190099 75191898 -20080753 + L1Md_F2 LINE L1 3766 5583 -300 3 1158 8057 54 0 4 chr17 75191901 75192889 -20079762 + L1Md_F2 LINE L1 5587 6570 -12 3 1158 635 331 97 23 chr17 75194095 75194621 -20078030 - ERVL-E-int LTR ERVL -4245 1422 858 3 1158 224 179 29 43 chr17 75196981 75197051 -20075600 + (CTG)n Simple_repeat Simple_repeat 1 69 0 4 1158 3602 47 11 26 chr17 75198033 75198494 -20074157 - L1_Mus2 LINE L1 0 6566 6113 4 1158 561 288 102 36 chr17 75198900 75199174 -20073477 - B4 SINE B4 0 292 1 4 1158 2363 256 101 45 chr17 75199538 75199993 -20072658 - Charlie12 DNA MER1_type 0 2873 2388 4 1158 682 206 124 26 chr17 75199993 75200187 -20072464 + B3 SINE B2 4 216 0 4 1158 2363 256 101 45 chr17 75200187 75200794 -20071857 - Charlie12 DNA MER1_type -486 2387 1752 4 1158 522 83 0 0 chr17 75200820 75200892 -20071759 + (TCCCC)n Simple_repeat Simple_repeat 3 74 0 4 1158 691 271 27 5 chr17 75200940 75201162 -20071489 - Charlie12 DNA MER1_type -1130 1743 1517 4 1158 226 125 51 51 chr17 75201198 75201257 -20071394 - RLTR12A LTR ERVK -38 530 472 4 1158 530 256 94 83 chr17 75201294 75201644 -20071007 - RLTR11B LTR ERVK -99 354 1 4 1158 234 287 33 33 chr17 75201662 75201752 -20070899 - Charlie12 DNA MER1_type -1395 1478 1389 4 1158 488 248 27 14 chr17 75201851 75201998 -20070653 + RMER30 DNA MER1_type 45 193 -9 4 1158 844 272 71 73 chr17 75202101 75202365 -20070286 - L1MB2 LINE L1 0 6171 5910 4 1158 938 202 34 24 chr17 75202365 75202573 -20070078 - B3 SINE B2 -5 211 2 4 1158 844 272 71 73 chr17 75202573 75202689 -20069962 - L1MB2 LINE L1 -262 5909 5792 4 1158 1132 83 0 0 chr17 75202836 75202992 -20069659 + B2_Mm2 SINE B2 2 157 -38 4 1158 261 0 0 0 chr17 75202992 75203021 -20069630 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 4 1158 312 91 0 0 chr17 75203075 75203119 -20069532 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1158 270 318 21 124 chr17 75203311 75203505 -20069146 + MER20 DNA MER1_type 42 215 -4 4 1158 349 230 8 66 chr17 75205298 75205419 -20067232 + B3A SINE B2 81 194 -4 4 1158 180 0 0 0 chr17 75205433 75205453 -20067198 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 1158 1120 63 0 27 chr17 75205456 75205602 -20067049 - B1_Mm SINE Alu -5 142 1 4 1158 183 42 0 0 chr17 75205602 75205626 -20067025 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1158 340 270 60 0 chr17 75206037 75206137 -20066514 - PB1D7 SINE Alu -11 109 4 4 1158 318 134 0 0 chr17 75206707 75206774 -20065877 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 1158 452 266 35 0 chr17 75208519 75208632 -20064019 - PB1D10 SINE Alu 0 117 1 4 1158 287 177 16 0 chr17 75208831 75208893 -20063758 + GA-rich Low_complexity Low_complexity 2 64 0 4 1158 461 212 40 114 chr17 75209830 75209845 -20062806 + B4 SINE B4 76 79 -213 4 1158 987 81 0 0 chr17 75209845 75209981 -20062670 + B1_Mus1 SINE Alu 2 137 -11 4 1158 216 0 0 0 chr17 75209981 75210005 -20062646 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1158 1933 128 48 9 chr17 75211016 75211331 -20061320 + ORR1A2 LTR MaLR 1 327 0 4 1158 271 283 94 37 chr17 75211439 75211579 -20061072 + MIRb SINE MIR 107 260 -8 4 1158 1646 126 4 4 chr17 75212166 75212414 -20060237 - RMER19C LTR ERVK 0 611 364 4 1158 580 172 122 8 chr17 75212469 75212592 -20060059 - RMER19C LTR ERVK -342 269 133 4 1158 3408 38 5 0 chr17 75212592 75212986 -20059665 + MTA_Mm LTR MaLR 1 396 0 4 1158 421 159 12 174 chr17 75212986 75213073 -20059578 - RMER19C LTR ERVK -533 78 1 4 1158 1573 220 28 138 chr17 75213073 75213415 -20059236 - MurERV4_19-int LTR ERVK 0 5780 5455 4 1158 189 0 0 0 chr17 75213415 75213436 -20059215 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 4 1158 1573 220 28 138 chr17 75213436 75213762 -20058889 - MurERV4_19-int LTR ERVK -326 5454 5185 4 1158 16012 168 76 55 chr17 75213753 75215314 -20057337 - MurERV4_19-int LTR ERVK -753 5027 3255 4 1158 475 271 118 31 chr17 75215314 75215569 -20057082 - Tigger1 DNA MER2_type -385 2033 1757 4 1158 1535 239 100 105 chr17 75215572 75216104 -20056547 - MT2A LTR ERVL -2 531 3 4 1158 16012 168 76 55 chr17 75216104 75218280 -20054371 - MurERV4_19-int LTR ERVK -2529 3251 949 4 1158 3591 148 34 10 chr17 75218260 75218873 -20053778 - MurERV4_19-int LTR ERVK -5152 628 1 4 1158 2842 163 141 34 chr17 75218873 75219425 -20053226 - RMER19C LTR ERVK 0 611 1 4 1158 316 281 86 7 chr17 75219494 75219634 -20053017 + MER33 DNA MER1_type 79 229 -95 4 1158 200 224 41 0 chr17 75219806 75219855 -20052796 + (CGTG)n Simple_repeat Simple_repeat 1 51 0 4 1158 272 343 0 0 chr17 75219877 75219947 -20052704 - RSINE1 SINE B4 -10 155 86 4 1158 285 326 0 59 chr17 75220069 75220170 -20052481 - RSINE1 SINE B4 -69 96 2 4 1158 203 254 16 0 chr17 75220731 75220794 -20051857 + (TTTG)n Simple_repeat Simple_repeat 3 66 0 4 1158 27715 139 12 7 chr17 75221087 75226547 -20046104 - Lx LINE L1 0 6654 1161 4 1158 423 0 0 0 chr17 75226547 75226594 -20046057 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1158 5598 125 44 8 chr17 75226594 75227331 -20045320 - Lx LINE L1 -5474 1160 402 4 1158 523 167 194 0 chr17 75228436 75228544 -20044107 - B3 SINE B2 -86 130 2 4 1158 430 276 154 36 chr17 75229006 75229628 -20043023 - L1ME2 LINE L1 -275 6062 5368 4 1158 1002 181 80 35 chr17 75229628 75229828 -20042823 - B3 SINE B2 -6 210 2 4 1158 421 260 86 77 chr17 75229828 75229863 -20042788 - L1ME2 LINE L1 -952 5367 5340 4 1158 198 0 0 0 chr17 75229928 75229950 -20042701 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 4 1158 1195 62 0 0 chr17 75229950 75230096 -20042555 - B1_Mus1 SINE Alu -1 147 2 4 1158 222 37 0 0 chr17 75230110 75230137 -20042514 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 1158 432 260 64 16 chr17 75230147 75230272 -20042379 - RSINE1 SINE B4 -32 133 3 4 1158 321 207 174 35 chr17 75230314 75230429 -20042222 - B1F SINE Alu -6 143 13 4 1158 373 260 162 39 chr17 75230436 75230523 -20042128 - L1ME2 LINE L1 -994 5325 5232 4 1158 230 320 26 0 chr17 75230523 75230601 -20042050 - ID4 SINE ID 0 83 4 4 1158 373 260 162 39 chr17 75230601 75230717 -20041934 - L1ME2 LINE L1 -1088 5231 5097 4 1158 612 106 125 0 chr17 75230803 75230907 -20041744 + B1_Mus2 SINE Alu 18 134 -13 4 1158 585 76 0 0 chr17 75230908 75230987 -20041664 + (GA)n Simple_repeat Simple_repeat 1 79 0 4 1158 546 86 0 0 chr17 75231108 75231189 -20041462 + (TCCC)n Simple_repeat Simple_repeat 3 83 0 4 1158 402 298 35 0 chr17 75231217 75231331 -20041320 - RSINE1 SINE B4 -19 146 29 4 1158 205 188 41 20 chr17 75231343 75231392 -20041259 + CT-rich Low_complexity Low_complexity 4 53 0 4 1158 261 228 119 0 chr17 75231773 75231874 -20040777 - PB1D7 SINE Alu -1 119 7 4 1158 358 333 40 0 chr17 75231815 75231941 -20040710 - B4A SINE B4 -137 155 25 4 1158 265 242 39 39 chr17 75232814 75232917 -20039734 - L1ME2 LINE L1 -4993 1407 1305 4 1158 197 146 21 0 chr17 75233343 75233391 -20039260 + CT-rich Low_complexity Low_complexity 3 51 0 4 1158 314 279 70 35 chr17 75233396 75233511 -20039140 - ID_B1 SINE B4 0 224 106 4 144 3771 92 11 0 chr17 75235069 75235590 -20037061 - L1_Mus3 LINE L1 -15 6623 6097 4 1159 790 204 30 24 chr17 75236564 75236730 -20035921 - B3 SINE B2 0 216 50 4 1159 795 318 14 5 chr17 75237135 75237350 -20035301 - B4 SINE B4 -75 217 1 4 1159 300 289 89 65 chr17 75237631 75237879 -20034772 - L1MEg LINE L1 -4574 1510 1257 4 1159 219 69 0 0 chr17 75238304 75238333 -20034318 + (TCC)n Simple_repeat Simple_repeat 2 30 0 4 1159 1130 192 14 18 chr17 75238554 75238771 -20033880 + B3 SINE B2 1 216 0 4 1159 2497 86 0 12 chr17 75239209 75239540 -20033111 - ORR1A2 LTR MaLR 0 327 1 4 1159 280 244 86 32 chr17 75241243 75241336 -20031315 - MIR SINE MIR -5 257 160 4 1159 298 197 42 0 chr17 75242060 75242131 -20030520 - ID2 SINE ID -6 77 4 4 1159 518 130 180 0 chr17 75242242 75242342 -20030309 - B1_Mm SINE Alu -12 135 18 4 1159 1012 197 72 0 chr17 75242618 75242811 -20029840 - B3 SINE B2 -8 208 2 4 1159 785 34 256 0 chr17 75243551 75243668 -20028983 - B1_Mm SINE Alu 0 147 1 4 1159 204 279 82 0 chr17 75244734 75244795 -20027856 - MIRb SINE MIR -89 179 114 4 1159 621 72 0 0 chr17 75244872 75244955 -20027696 + (TG)n Simple_repeat Simple_repeat 1 83 0 4 1159 757 246 120 23 chr17 75244977 75245243 -20027408 - B4A SINE B4 0 292 1 4 1159 230 283 106 55 chr17 75246372 75246563 -20026088 + L1M4 LINE L1 2686 2889 -3251 4 1159 904 192 129 150 chr17 75246563 75246677 -20025974 + ORR1C1 LTR MaLR 1 130 -248 4 1159 333 0 0 0 chr17 75246677 75246714 -20025937 + (TCTCTG)n Simple_repeat Simple_repeat 3 39 0 4 1159 904 192 129 150 chr17 75246714 75246985 -20025666 + ORR1C1 LTR MaLR 131 378 0 4 1159 230 283 106 55 chr17 75246985 75247010 -20025641 + L1M4 LINE L1 2890 2913 -3227 4 1159 612 150 8 34 chr17 75247113 75247230 -20025421 - B1_Mur2 SINE Alu 0 149 36 4 1159 226 198 35 86 chr17 75247324 75247440 -20025211 + L1M4 LINE L1 3061 3170 -2976 4 1159 539 292 73 38 chr17 75247717 75248005 -20024646 + L1M4 LINE L1 3620 3917 -2223 4 1159 4214 139 28 81 chr17 75248001 75248782 -20023869 - Lx LINE L1 -51 6603 5864 4 1159 563 280 121 7 chr17 75248846 75249127 -20023524 + L1M4 LINE L1 3999 4311 -1835 4 1159 469 185 0 11 chr17 75249208 75249301 -20023350 - B1_Mur2 SINE Alu -12 137 46 4 1159 203 135 54 0 chr17 75249613 75249650 -20023001 + T-rich Low_complexity Low_complexity 4 42 0 4 1159 241 276 32 65 chr17 75249814 75249969 -20022682 - L1M3 LINE L1 -313 5870 5721 4 1159 386 263 176 19 chr17 75250804 75250963 -20021688 + MIR SINE MIR 22 205 -57 4 1159 206 139 0 27 chr17 75250993 75251030 -20021621 + (CAT)n Simple_repeat Simple_repeat 3 38 0 4 1159 387 287 81 96 chr17 75251392 75251727 -20020924 - MLT1B LTR MaLR 0 390 61 4 1159 381 218 0 49 chr17 75252138 75252220 -20020431 + RSINE1 SINE B4 3 80 -85 4 1159 390 74 0 0 chr17 75252224 75252278 -20020373 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1159 234 306 80 8 chr17 75252434 75252559 -20020092 + Charlie24 DNA MER1_type 2305 2438 -12 4 1159 469 287 51 11 chr17 75253688 75253864 -20018787 + B4A SINE B4 1 183 -109 4 1159 217 105 53 0 chr17 75253877 75253915 -20018736 + A-rich Low_complexity Low_complexity 2 41 0 4 1159 462 147 81 40 chr17 75253937 75254036 -20018615 + B1_Mur1 SINE Alu 46 148 -1 4 1159 180 77 0 0 chr17 75254038 75254064 -20018587 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 4 1159 333 224 0 15 chr17 75254690 75254758 -20017893 + MER5A1 DNA MER1_type 1 67 -99 4 1159 413 295 122 59 chr17 75256093 75256363 -20016288 - B4 SINE B4 -3 289 3 4 1159 188 367 20 20 chr17 75258189 75258339 -20014312 + MIRb SINE MIR 5 154 -114 4 1159 783 177 0 52 chr17 75259415 75259570 -20013081 - B1_Mur1 SINE Alu -2 147 1 4 1159 602 235 89 21 chr17 75259959 75260150 -20012501 - B3 SINE B2 -11 205 2 4 1159 1568 43 21 0 chr17 75260473 75260661 -20011990 + B2_Mm1a SINE B2 1 192 -1 4 1159 1095 96 0 0 chr17 75260680 75260836 -20011815 + B2_Mm2 SINE B2 2 157 -38 4 1159 225 0 0 0 chr17 75260839 75260864 -20011787 + (TAGA)n Simple_repeat Simple_repeat 1 25 0 4 1159 186 224 0 0 chr17 75261054 75261103 -20011548 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 1159 293 208 25 49 chr17 75261169 75261250 -20011401 + ID4 SINE ID 1 79 -4 4 1159 214 227 53 0 chr17 75264322 75264397 -20008254 + (GTGTG)n Simple_repeat Simple_repeat 3 81 0 5 1159 387 60 0 0 chr17 75264817 75264867 -20007784 + (T)n Simple_repeat Simple_repeat 1 50 0 5 1159 963 53 0 0 chr17 75264867 75264998 -20007653 - B1_Mus2 SINE Alu 0 147 17 5 1159 195 42 0 0 chr17 75266219 75266243 -20006408 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 5 1159 270 0 0 0 chr17 75267020 75267050 -20005601 + (TTTTA)n Simple_repeat Simple_repeat 3 32 0 5 1159 200 314 23 11 chr17 75267306 75267393 -20005258 + MIRb SINE MIR 55 142 -126 5 1159 305 198 19 19 chr17 75267766 75267869 -20004782 + CT-rich Low_complexity Low_complexity 2 104 0 5 1159 785 287 65 34 chr17 75267882 75268145 -20004506 - Lx8 LINE L1 -61 7412 7142 5 1159 370 186 44 55 chr17 75268217 75268308 -20004343 + B1F SINE Alu 1 90 -59 5 1159 221 186 0 33 chr17 75269275 75269336 -20003315 + (TCTG)n Simple_repeat Simple_repeat 1 59 0 5 1159 387 296 155 89 chr17 75270703 75271151 -20001500 + MLT1F2 LTR MaLR 3 482 -78 5 1159 337 108 15 0 chr17 75271151 75271216 -20001435 + L1_Mus3 LINE L1 6571 6636 -2 5 1159 387 296 155 89 chr17 75271216 75271252 -20001399 + MLT1F2 LTR MaLR 483 519 -41 5 1159 1161 71 12 0 chr17 75271457 75271626 -20001025 + B2_Mm2 SINE B2 2 172 -23 5 1159 1346 93 0 58 chr17 75272768 75272974 -19999677 + B2_Mm2 SINE B2 2 195 0 5 1159 504 0 0 0 chr17 75273542 75273598 -19999053 + (TC)n Simple_repeat Simple_repeat 2 57 0 5 1159 474 18 0 0 chr17 75273598 75273652 -19998999 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1159 261 320 109 73 chr17 75273665 75273857 -19998794 - B4A SINE B4 -10 282 84 5 1159 1274 153 106 13 chr17 75273906 75274203 -19998448 - MTC LTR MaLR -65 335 1 5 1159 305 266 8 50 chr17 75274726 75274845 -19997806 + PB1D10 SINE Alu 4 117 0 5 1159 941 249 106 23 chr17 75275585 75275922 -19996729 + MTD LTR MaLR 54 387 -32 5 1159 216 0 0 0 chr17 75276151 75276175 -19996476 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1159 473 291 160 49 chr17 75276804 75277111 -19995540 + MLT1A1 LTR MaLR 54 394 -14 5 1159 1804 253 63 19 chr17 75277392 75278054 -19994597 - Lx7 LINE L1 -1753 5943 5242 5 1159 386 152 0 0 chr17 75278231 75278297 -19994354 + L1_Rod LINE L1 5128 5193 -654 5 1159 305 208 39 68 chr17 75278645 75278748 -19993903 + MER5A DNA MER1_type 7 106 -83 5 1159 186 133 0 0 chr17 75278950 75278980 -19993671 + (TCCCC)n Simple_repeat Simple_repeat 1 30 0 5 1159 208 221 99 42 chr17 75279009 75279080 -19993571 + MIRm SINE MIR 61 135 -141 5 1159 368 180 133 11 chr17 75279328 75279418 -19993233 - B1_Mur3 SINE Alu -23 126 26 5 1159 495 0 0 0 chr17 75279677 75279732 -19992919 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1159 639 226 108 48 chr17 75280489 75280675 -19991976 - B3A SINE B2 0 198 2 5 1159 787 289 76 14 chr17 75283697 75283992 -19988659 - MLT2B4 LTR ERVL -7 513 208 5 1159 998 267 141 2 chr17 75284034 75284330 -19988321 + L1M4 LINE L1 2585 2914 -3232 5 1159 362 57 0 19 chr17 75284330 75284384 -19988267 + (TAA)n Simple_repeat Simple_repeat 2 54 0 5 1159 998 267 141 2 chr17 75284384 75284556 -19988095 + L1M4 LINE L1 2915 3117 -3029 5 1159 435 298 92 7 chr17 75284580 75284722 -19987929 + B3A SINE B2 1 154 -44 5 1159 2265 141 118 18 chr17 75285735 75286118 -19986533 - MTC LTR MaLR 0 421 1 5 1159 455 184 46 0 chr17 75286977 75287081 -19985570 - PB1D9 SINE Alu -1 119 4 5 1159 241 204 17 69 chr17 75287719 75287777 -19984874 - B1F1 SINE Alu -11 138 84 5 1159 743 71 0 0 chr17 75289632 75289730 -19982921 + L1VL1 LINE L1 218 315 -6323 5 1159 7884 67 1 1 chr17 75289726 75291398 -19981253 + L1VL1 LINE L1 639 2310 -3573 5 1159 41958 6 1 1 chr17 75291394 75298305 -19974346 - L1Md_A LINE L1 0 6582 1 5 1159 17658 81 2 0 chr17 75298299 75300675 -19971976 + L1VL1 LINE L1 2296 4676 -1207 5 1159 3141 49 0 0 chr17 75300678 75301045 -19971606 + L1_Mus1 LINE L1 6073 6439 -128 5 1159 4031 168 96 27 chr17 75301233 75302043 -19970608 - RMER13B LTR ERVK -42 866 1 5 1159 722 329 56 45 chr17 75302047 75302203 -19970448 + MTEb LTR MaLR 20 173 -206 5 1159 546 16 0 0 chr17 75302203 75302266 -19970385 + (GTGTG)n Simple_repeat Simple_repeat 4 66 0 5 1159 722 329 56 45 chr17 75302266 75302465 -19970186 + MTEb LTR MaLR 174 378 -1 5 1159 3167 151 22 41 chr17 75303241 75303827 -19968824 + RMER15 LTR ERVL 1 575 0 5 1159 239 173 0 19 chr17 75303958 75304011 -19968640 + GA-rich Low_complexity Low_complexity 4 55 0 5 1159 312 158 0 0 chr17 75304041 75304098 -19968553 + GA-rich Low_complexity Low_complexity 3 59 0 5 1159 918 247 148 23 chr17 75304579 75304851 -19967800 + RMER1B Other Other 1 290 -776 5 1159 2177 97 11 70 chr17 75304879 75305235 -19967416 + IAPLTR1a_Mm LTR ERVK 1 335 -2 5 1159 58381 16 4 9 chr17 75305247 75311730 -19960921 + IAPEz-int LTR ERVK 35 6481 0 5 1159 2162 100 11 70 chr17 75311730 75312086 -19960565 + IAPLTR1a_Mm LTR ERVK 1 335 -2 5 1159 1372 238 75 110 chr17 75312099 75312726 -19959925 + RMER1A Other Other 361 932 -134 5 1159 306 0 0 0 chr17 75312726 75312760 -19959891 + (TTTG)n Simple_repeat Simple_repeat 4 37 0 5 1159 1372 154 102 0 chr17 75312760 75312891 -19959760 + RMER1A Other Other 882 1026 -4 5 1159 246 62 0 0 chr17 75312916 75312948 -19959703 + (TATATG)n Simple_repeat Simple_repeat 2 33 0 5 1159 756 163 6 165 chr17 75312949 75313125 -19959526 - B1_Mur4 SINE Alu -1 149 2 5 1159 270 301 60 71 chr17 75313361 75313529 -19959122 + MLT1E LTR MaLR 488 653 0 5 1159 873 306 21 29 chr17 75313529 75313804 -19958847 + Charlie1a DNA MER1_type 395 667 -788 5 1159 1360 290 43 78 chr17 75313865 75314624 -19958027 - L1MA7 LINE L1 0 6291 5559 5 1159 21 0 0 0 chr17 75314681 75314702 -19957949 + AT_rich Low_complexity Low_complexity 1 21 0 5 1159 505 224 41 14 chr17 75314721 75314866 -19957785 - MLT1C LTR MaLR -50 417 269 5 1159 400 313 68 38 chr17 75315035 75315301 -19957350 - L1MA5 LINE L1 -380 5920 5647 5 1159 1927 164 18 92 chr17 75315304 75315686 -19956965 - ORR1B1 LTR MaLR -2 392 39 5 1159 343 257 124 35 chr17 75315691 75315882 -19956769 - L1MA5 LINE L1 -652 5648 5436 5 1159 1469 193 202 139 chr17 75315912 75316471 -19956180 - RMER19C LTR ERVK -6 896 231 5 1159 543 74 0 0 chr17 75316485 75316566 -19956085 + (CA)n Simple_repeat Simple_repeat 1 81 0 5 1159 356 260 53 48 chr17 75316602 75316832 -19955819 - L1M2 LINE L1 -767 5524 5293 5 1159 445 205 7 140 chr17 75316842 75316978 -19955673 + B1F1 SINE Alu 6 123 -26 5 1159 331 288 0 0 chr17 75316976 75317056 -19955595 + ID_B1 SINE B4 143 222 -2 5 1159 263 230 58 0 chr17 75317066 75317153 -19955498 - L1M2 LINE L1 -881 5262 5171 5 1159 396 59 0 0 chr17 75317185 75317236 -19955415 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1159 1268 292 46 18 chr17 75317243 75317745 -19954906 - L1M2 LINE L1 -1178 4965 4450 5 1159 1147 286 19 32 chr17 75317756 75318168 -19954483 - L1M2 LINE L1 -2368 3775 3369 5 1159 1645 241 24 3 chr17 75318176 75318547 -19954104 - MTE2b LTR MaLR 0 379 1 5 1159 1278 276 77 38 chr17 75318549 75318930 -19953721 - L1M2 LINE L1 -2828 3315 2923 5 1159 180 0 0 0 chr17 75318930 75318950 -19953701 + (TA)n Simple_repeat Simple_repeat 1 20 0 5 1159 1278 276 77 38 chr17 75318950 75319306 -19953345 - L1M2 LINE L1 -3221 2922 2550 5 1159 1606 191 74 14 chr17 75319307 75319658 -19952993 - ORR1D1 LTR MaLR 0 374 3 5 1159 674 185 74 0 chr17 75319660 75319795 -19952856 - ORR1D1-int LTR MaLR 0 1370 1226 5 1159 1205 61 0 6 chr17 75319819 75319983 -19952668 + (TTTC)n Simple_repeat Simple_repeat 3 165 0 5 1159 1162 90 0 17 chr17 75320000 75320180 -19952471 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 5 1159 3970 213 64 66 chr17 75320182 75321512 -19951139 - RMER1A Other Other -15 1015 7 5 1159 2068 80 7 0 chr17 75321699 75321974 -19950677 + ORR1A2 LTR MaLR 51 327 0 5 1159 556 203 151 92 chr17 75322946 75323019 -19949632 - ORR1D1-int LTR MaLR -186 1323 1254 5 1159 3174 78 0 2 chr17 75323019 75323416 -19949235 - MTA_Mm LTR MaLR 0 396 1 5 1159 556 203 151 92 chr17 75323416 75323548 -19949103 - ORR1D1-int LTR MaLR -256 1253 1106 5 1159 1083 252 48 81 chr17 75323748 75324106 -19948545 - MTE2b LTR MaLR -31 348 3 5 1159 766 180 14 41 chr17 75324140 75324285 -19948366 + B1_Mur4 SINE Alu 5 145 -5 5 1159 2260 256 51 48 chr17 75324299 75324907 -19947744 - MTE2b-int LTR MaLR -1 1579 970 5 1159 1359 279 43 14 chr17 75324907 75325278 -19947373 - MTE2b-int LTR MaLR -1198 382 1 5 1159 970 218 91 18 chr17 75325278 75325498 -19947153 - MTE2b LTR MaLR 0 379 144 5 1159 279 0 0 0 chr17 75325789 75325820 -19946831 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 5 1159 798 139 0 62 chr17 75325820 75325966 -19946685 - B1_Mur4 SINE Alu -13 137 1 5 1159 567 220 163 11 chr17 75325983 75326167 -19946484 - B3 SINE B2 0 216 5 5 1159 243 289 143 10 chr17 75326179 75326272 -19946379 - MLT1A1 LTR MaLR -47 361 255 5 1159 4968 48 30 0 chr17 75326272 75326878 -19945773 + L1_Mus1 LINE L1 5944 6567 0 5 1159 631 242 245 19 chr17 75326901 75327166 -19945485 - Lx8 LINE L1 0 7473 7149 5 1159 1830 143 127 9 chr17 75327312 75327650 -19945001 - ORR1C1 LTR MaLR 0 378 1 5 1159 507 211 17 17 chr17 75327700 75327874 -19944777 + CT-rich Low_complexity Low_complexity 6 179 0 5 1159 675 195 17 0 chr17 75327891 75328009 -19944642 - PB1D9 SINE Alu 0 120 1 5 1159 350 249 148 62 chr17 75328065 75328103 -19944548 - L1MD3 LINE L1 0 7995 7964 5 1159 1113 146 15 25 chr17 75328103 75328300 -19944351 - B2_Mm2 SINE B2 0 195 1 5 1159 350 249 148 62 chr17 75328300 75328437 -19944214 - L1MD3 LINE L1 -32 7963 7806 5 1159 195 129 0 0 chr17 75328471 75328502 -19944149 + (CTTG)n Simple_repeat Simple_repeat 1 31 0 5 1159 736 187 67 0 chr17 75328504 75328638 -19944013 - B1_Mur4 SINE Alu -7 143 1 5 1159 298 266 181 7 chr17 75328751 75328951 -19943700 + MIRb SINE MIR 8 246 -22 5 1159 321 286 26 85 chr17 75328977 75329130 -19943521 - LTR16A LTR ERVL -13 438 295 5 1159 286 304 171 23 chr17 75329150 75329325 -19943326 - LTR16A LTR ERVL -248 208 8 5 1159 210 143 0 0 chr17 75329468 75329503 -19943148 + (T)n Simple_repeat Simple_repeat 1 35 0 5 1159 555 118 0 0 chr17 75330081 75330166 -19942485 + (CA)n Simple_repeat Simple_repeat 2 86 0 5 1159 222 37 0 0 chr17 75330166 75330193 -19942458 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1159 426 331 23 83 chr17 75330194 75330488 -19942163 - MTE2b LTR MaLR -113 266 19 5 1159 237 191 78 16 chr17 75330875 75330939 -19941712 - Lx6 LINE L1 -599 6861 6794 5 1159 268 308 48 9 chr17 75331525 75331630 -19941021 - Tigger5 DNA MER2_type -7 2399 2291 5 1159 1310 259 33 74 chr17 75331750 75332113 -19940538 + MTEa LTR MaLR 18 365 -14 5 1159 1125 248 9 0 chr17 75332419 75332629 -19940022 - B3 SINE B2 -4 212 1 5 1159 201 143 0 0 chr17 75332646 75332681 -19939970 + (TTGG)n Simple_repeat Simple_repeat 1 35 0 5 1159 583 189 22 96 chr17 75332681 75332816 -19939835 - B1_Mur1 SINE Alu -2 147 23 5 1159 1105 102 0 0 chr17 75332881 75333028 -19939623 - B1_Mus1 SINE Alu -1 147 1 5 1159 1035 273 162 29 chr17 75333058 75333623 -19939028 - BLACKJACK DNA AcHobo -166 2778 2168 6 1159 1429 70 16 0 chr17 75333623 75333808 -19938843 + B2_Mm2 SINE B2 1 188 -7 6 1159 1035 273 162 29 chr17 75333808 75333956 -19938695 - BLACKJACK DNA AcHobo -777 2167 1971 6 1159 245 219 62 0 chr17 75334292 75334356 -19938295 - L1MA7 LINE L1 -1 6290 6223 6 1159 687 72 52 0 chr17 75334356 75334453 -19938198 - B2_Mm2 SINE B2 -92 103 2 6 1159 234 257 29 0 chr17 75334543 75334613 -19938038 - BLACKJACK DNA AcHobo -1051 1893 1822 6 1159 1143 104 2 0 chr17 75334725 75335153 -19937498 + (TG)n Simple_repeat Simple_repeat 1 429 0 6 1159 355 281 137 46 chr17 75335154 75335504 -19937147 - BLACKJACK DNA AcHobo -1337 1607 1226 6 1159 289 261 14 0 chr17 75335554 75335623 -19937028 - ID4 SINE ID -12 71 2 6 1159 285 278 141 20 chr17 75335623 75335722 -19936929 - PB1D10 SINE Alu -2 115 5 6 1159 263 321 44 9 chr17 75335726 75335839 -19936812 + L1MA9 LINE L1 5590 5706 -585 6 1159 1141 122 48 0 chr17 75335858 75336047 -19936604 + RMER19B LTR ERVK 693 890 -12 6 1159 3469 165 83 10 chr17 75336078 75336752 -19935899 - RMER19B LTR ERVK -179 723 1 6 1159 519 284 64 75 chr17 75336757 75336902 -19935749 + L1MA9 LINE L1 5683 5831 -481 6 1159 601 212 68 8 chr17 75336902 75337035 -19935616 - B1_Mus2 SINE Alu -5 142 2 6 1159 519 284 64 75 chr17 75337035 75337277 -19935374 + L1MA9 LINE L1 5832 6066 -246 6 1159 526 268 131 21 chr17 75337552 75337788 -19934863 - BLACKJACK DNA AcHobo -1802 1142 881 6 1159 858 78 46 0 chr17 75337888 75338041 -19934610 + (TCTA)n Simple_repeat Simple_repeat 2 161 0 6 1159 1169 190 99 68 chr17 75338049 75338479 -19934172 - MT2A LTR ERVL -31 570 1 6 1159 511 318 49 9 chr17 75338666 75338862 -19933789 + B3A SINE B2 2 203 -13 6 1159 810 182 14 7 chr17 75338941 75339085 -19933566 + B1_Mur4 SINE Alu 5 149 -1 6 1159 255 345 60 22 chr17 75339462 75339646 -19933005 - BLACKJACK DNA AcHobo -2650 294 104 6 1159 253 250 97 11 chr17 75343306 75343399 -19929252 + L2a LINE L2 3307 3407 -19 6 1159 2246 192 100 33 chr17 75343746 75343875 -19928776 - Lx9 LINE L1 -1 7643 7515 6 1159 279 79 0 0 chr17 75343875 75343913 -19928738 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1159 2246 192 100 33 chr17 75343913 75344331 -19928320 - Lx9 LINE L1 -130 7514 7059 6 1159 215 197 127 0 chr17 75344342 75344413 -19928238 + MIRb SINE MIR 115 194 -74 6 1159 850 282 83 10 chr17 75345173 75345708 -19926943 - L1M2 LINE L1 -547 5627 4883 6 1159 516 16 0 0 chr17 75345708 75345769 -19926882 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 6 1159 768 316 156 29 chr17 75345769 75345899 -19926752 - L1M2 LINE L1 -917 4963 4782 6 1159 1379 78 20 20 chr17 75345899 75346094 -19926557 - B2_Mm2 SINE B2 0 195 1 6 1159 768 288 91 43 chr17 75346094 75346436 -19926215 - L1M2 LINE L1 -1330 4813 4422 6 1159 372 333 163 20 chr17 75346440 75346685 -19925966 + B4A SINE B4 1 280 -12 6 1159 633 272 21 16 chr17 75346685 75346872 -19925779 - L1M2 LINE L1 -1948 4195 4008 6 1159 981 177 193 0 chr17 75346897 75347078 -19925573 - B3 SINE B2 0 216 1 6 1159 2056 264 174 19 chr17 75347096 75348040 -19924611 + L1MC3 LINE L1 6489 7578 -207 6 1159 243 230 0 0 chr17 75348104 75348191 -19924460 + GA-rich Low_complexity Low_complexity 3 89 0 6 1159 237 157 20 0 chr17 75348239 75348290 -19924361 + L1M4c LINE L1 2373 2424 -3960 6 1159 597 233 13 33 chr17 75348291 75348442 -19924209 + B1F SINE Alu 1 148 -1 6 1159 378 0 0 0 chr17 75348807 75348849 -19923802 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1159 309 297 99 32 chr17 75348904 75349077 -19923574 + L1M4c LINE L1 2630 2814 -3568 6 1159 239 79 26 0 chr17 75349081 75349119 -19923532 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 6 1159 2922 149 47 4 chr17 75349344 75349465 -19923186 - RMER1A Other Other -12 1018 889 6 1159 306 73 0 0 chr17 75349465 75349506 -19923145 + (CCA)n Simple_repeat Simple_repeat 1 41 0 6 1159 2922 149 47 4 chr17 75349506 75349875 -19922776 - RMER1A Other Other -142 888 508 6 1159 270 237 26 13 chr17 75349875 75349952 -19922699 - MTEb LTR MaLR -21 358 281 6 1159 1926 175 14 109 chr17 75350169 75350592 -19922059 + ORR1C2 LTR MaLR 2 384 0 6 1159 33 0 0 0 chr17 75350699 75350732 -19921919 + AT_rich Low_complexity Low_complexity 1 33 0 6 1159 4854 56 3 2 chr17 75350909 75351501 -19921150 - L1_Mus1 LINE L1 0 6567 5975 6 1159 657 215 46 11 chr17 75351502 75351676 -19920975 + L1MA9 LINE L1 6128 6307 -5 6 1159 1350 286 87 30 chr17 75352518 75353055 -19919596 - Lx6 LINE L1 -10 7450 6506 6 1159 391 238 12 0 chr17 75353193 75353277 -19919374 + MLT2B2 LTR ERVL 229 313 -202 6 1159 198 71 0 0 chr17 75353375 75353403 -19919248 + (CAGA)n Simple_repeat Simple_repeat 3 30 0 6 1159 482 285 108 5 chr17 75354068 75354262 -19918389 + MLT1E1A LTR MaLR 1 214 -466 6 1159 377 333 7 22 chr17 75354352 75354487 -19918164 + MLT1E1A LTR MaLR 391 523 -130 6 1159 358 323 94 49 chr17 75355010 75355254 -19917397 + MER115 DNA Tip100 355 609 -84 6 1159 369 354 20 58 chr17 75355520 75355868 -19916783 - Lx8 LINE L1 -32 7441 7107 6 1159 513 0 0 0 chr17 75355926 75355983 -19916668 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 1159 22 0 0 0 chr17 75356395 75356417 -19916234 + AT_rich Low_complexity Low_complexity 1 22 0 6 1159 423 56 0 0 chr17 75356418 75356472 -19916179 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1159 382 262 117 0 chr17 75356491 75356594 -19916057 - B3A SINE B2 -82 116 2 6 1159 400 169 0 0 chr17 75357367 75357432 -19915219 + B1_Mur4 SINE Alu 25 89 -61 6 1159 230 174 0 42 chr17 75357433 75357481 -19915170 + RLTR28 LTR ERVL 465 510 -14 6 1159 969 225 10 5 chr17 75357531 75357732 -19914919 - B3 SINE B2 -14 202 1 6 1159 410 324 140 43 chr17 75357860 75358160 -19914491 + MLT1A LTR MaLR 43 371 -3 6 1159 959 286 100 30 chr17 75358774 75359203 -19913448 + MLT1D LTR MaLR 41 499 -6 6 1159 489 252 95 35 chr17 75360798 75361176 -19911475 - RLTR12B LTR ERVK -250 278 1 6 1159 1630 21 21 0 chr17 75361281 75361468 -19911183 + B2_Mm1a SINE B2 2 192 -1 6 1159 246 62 0 0 chr17 75361544 75361576 -19911075 + (A)n Simple_repeat Simple_repeat 1 32 0 6 1159 891 212 119 66 chr17 75362007 75362310 -19910341 - RCHARR1 DNA MER1_type 0 974 656 6 1159 2728 151 60 23 chr17 75362342 75362859 -19909792 + RLTR17 LTR ERVK 98 633 -59 6 1159 811 182 65 7 chr17 75362830 75362985 -19909666 - B3 SINE B2 -52 164 1 6 1159 6163 93 18 6 chr17 75363035 75363904 -19908747 - Lx3B LINE L1 0 6973 6094 6 1159 606 176 196 11 chr17 75363908 75364092 -19908559 - RCHARR1 DNA MER1_type -500 474 257 6 1159 754 303 108 19 chr17 75364472 75364795 -19907856 + MTE2a LTR MaLR 15 366 -13 6 1159 536 250 12 86 chr17 75365311 75365473 -19907178 - B4A SINE B4 -142 150 1 6 1159 932 263 40 86 chr17 75365860 75366234 -19906417 - MTE2a LTR MaLR -14 365 9 6 1160 299 65 22 0 chr17 75366400 75366446 -19906205 + (TTAA)n Simple_repeat Simple_repeat 3 49 0 6 1160 273 243 0 14 chr17 75366460 75366531 -19906120 - MER3 DNA MER1_type -42 167 98 6 1160 1026 285 82 16 chr17 75368819 75369312 -19903339 + L1M4 LINE L1 4906 5428 -756 6 1160 276 30 0 0 chr17 75369358 75369391 -19903260 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1160 354 127 0 0 chr17 75369391 75369462 -19903189 + (GA)n Simple_repeat Simple_repeat 1 71 0 6 1160 288 0 0 0 chr17 75369473 75369505 -19903146 + (CAGG)n Simple_repeat Simple_repeat 3 34 0 6 1160 358 274 21 0 chr17 75369550 75369645 -19903006 - RSINE1 SINE B4 -66 99 3 6 1160 450 247 59 141 chr17 75369661 75369916 -19902735 + L1M4 LINE L1 5480 5702 -540 6 1160 763 263 49 65 chr17 75370014 75370339 -19902312 - L1MB7 LINE L1 -165 6019 5700 6 1160 6635 68 16 9 chr17 75370341 75372006 -19900645 + L1VL2 LINE L1 171 1845 -1770 6 1160 1208 42 0 0 chr17 75372726 75372870 -19899781 - B1_Mus1 SINE Alu -3 145 2 6 1160 33 43 0 0 chr17 75373228 75373275 -19899376 + AT_rich Low_complexity Low_complexity 1 47 0 6 1160 438 246 94 29 chr17 75373596 75373734 -19898917 + RSINE1 SINE B4 4 150 -15 6 1160 202 312 62 0 chr17 75376171 75376235 -19896416 + L2b LINE L2 3308 3375 0 6 1160 331 182 0 0 chr17 75376383 75376438 -19896213 + B1_Mur4 SINE Alu 1 55 -95 6 1160 432 244 0 0 chr17 75376469 75376649 -19896002 + GA-rich Low_complexity Low_complexity 1 180 0 6 1160 220 250 0 0 chr17 75376649 75376701 -19895950 + (CAGG)n Simple_repeat Simple_repeat 3 54 0 6 1160 580 147 9 35 chr17 75376701 75376814 -19895837 + B1_Mur4 SINE Alu 41 150 0 6 1160 187 348 32 11 chr17 75376998 75377091 -19895560 - L3 LINE CR1 -1431 3058 2964 6 1160 584 202 0 17 chr17 75377175 75377291 -19895360 - PB1D10 SINE Alu -3 114 1 6 1160 180 225 183 0 chr17 75377825 75377896 -19894755 - L3 LINE CR1 -2238 2251 2168 6 1160 412 220 218 86 chr17 75377944 75378118 -19894533 - B3A SINE B2 0 198 2 6 1160 1404 193 111 40 chr17 75378383 75378761 -19893890 - MTD LTR MaLR 0 419 15 6 1160 222 281 0 15 chr17 75378849 75378914 -19893737 + (TG)n Simple_repeat Simple_repeat 1 64 0 6 1160 492 242 31 31 chr17 75378917 75379045 -19893606 - B4 SINE B4 -7 285 158 6 1160 2119 117 6 6 chr17 75380028 75380364 -19892287 + ORR1A1 LTR MaLR 3 338 -8 6 1160 531 96 0 0 chr17 75381766 75381849 -19890802 + (TC)n Simple_repeat Simple_repeat 1 83 0 6 1160 48 60 0 0 chr17 75381943 75382026 -19890625 + AT_rich Low_complexity Low_complexity 1 83 0 6 1160 230 128 0 0 chr17 75382026 75382065 -19890586 - B1_Mur3 SINE Alu -35 114 76 6 1160 283 378 78 19 chr17 75383359 75383431 -19889220 - 7SK RNA RNA -85 246 176 6 1160 1228 134 119 0 chr17 75383431 75383633 -19889018 - URR1A DNA MER1_type 0 226 1 6 1160 283 378 78 19 chr17 75383633 75383765 -19888886 - 7SK RNA RNA -156 175 32 6 1160 353 298 25 34 chr17 75384204 75384322 -19888329 + MER58A DNA MER1_type 1 117 -107 6 1160 3353 184 72 17 chr17 75384758 75385457 -19887194 - RMER19A LTR ERVK 0 737 1 6 1160 705 43 0 0 chr17 75386227 75386320 -19886331 + (CTCA)n Simple_repeat Simple_repeat 1 93 0 6 1160 240 35 0 0 chr17 75386795 75386824 -19885827 + (TC)n Simple_repeat Simple_repeat 1 29 0 6 1160 342 0 0 0 chr17 75386824 75386861 -19885790 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1160 186 71 0 0 chr17 75387604 75387632 -19885019 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 6 1160 4629 135 84 8 chr17 75387633 75388380 -19884271 - Lx4A LINE L1 -17 7041 6238 6 1160 1125 188 33 9 chr17 75388499 75388709 -19883942 - B3 SINE B2 0 216 2 6 1160 523 287 7 0 chr17 75388890 75389026 -19883625 + B1F SINE Alu 1 137 -12 6 1160 210 105 0 0 chr17 75389026 75389064 -19883587 + (CATA)n Simple_repeat Simple_repeat 4 41 0 6 1160 2596 103 163 7 chr17 75389064 75389524 -19883127 + RLTR47_MM LTR ERV1 1 532 0 7 1160 303 308 59 59 chr17 75389575 75389727 -19882924 - L1MEe LINE L1 -4347 1802 1651 7 1160 804 242 33 86 chr17 75389766 75390069 -19882582 - B4A SINE B4 -5 287 1 7 1160 232 284 42 56 chr17 75390083 75390154 -19882497 - ID2 SINE ID -13 70 1 7 1160 217 221 171 29 chr17 75390179 75390249 -19882402 - PB1D7 SINE Alu -38 82 3 7 1160 273 210 145 0 chr17 75390188 75390250 -19882401 - ID_B1 SINE B4 -71 153 83 7 1160 336 356 102 37 chr17 75390259 75390455 -19882196 - L1MEe LINE L1 -4533 1616 1414 7 1160 258 32 0 0 chr17 75390455 75390486 -19882165 + (TC)n Simple_repeat Simple_repeat 1 31 0 7 1160 336 356 102 37 chr17 75390486 75390534 -19882117 - L1MEe LINE L1 -4736 1413 1356 7 1160 565 254 75 34 chr17 75390591 75390738 -19881913 + RSINE1 SINE B4 13 165 0 7 1160 207 0 0 0 chr17 75390811 75390834 -19881817 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 1160 314 368 84 49 chr17 75391016 75391362 -19881289 - L1MEe LINE L1 -5659 460 103 7 1160 270 203 33 33 chr17 75391698 75391759 -19880892 - MER58A DNA MER1_type -133 91 31 7 1160 194 274 20 0 chr17 75392492 75392543 -19880108 - MIRb SINE MIR -194 74 23 7 1160 327 308 0 71 chr17 75392767 75392879 -19879772 + PB1D10 SINE Alu 14 117 0 7 1160 306 0 0 0 chr17 75392951 75392985 -19879666 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 7 1160 259 276 0 54 chr17 75394623 75394640 -19878011 - B4 SINE B4 -63 229 213 7 1160 183 42 0 0 chr17 75394640 75394664 -19877987 + (TGGGGG)n Simple_repeat Simple_repeat 1 24 0 7 1160 259 276 0 54 chr17 75394664 75394757 -19877894 - B4 SINE B4 -80 212 126 7 1160 635 224 60 0 chr17 75395405 75395539 -19877112 - RSINE1 SINE B4 -20 145 4 7 1160 2200 281 88 73 chr17 75395669 75397327 -19875324 + Lx8 LINE L1 4977 6681 -792 7 1160 423 338 6 0 chr17 75397465 75397622 -19875029 + Lx8 LINE L1 6712 6869 -604 7 1160 525 365 84 32 chr17 75398066 75398635 -19874016 + Lx8 LINE L1 6873 7471 -2 7 1160 264 122 0 0 chr17 75398940 75398981 -19873670 + (T)n Simple_repeat Simple_repeat 1 41 0 7 1160 361 21 0 0 chr17 75398981 75399028 -19873623 - B1_Mm SINE Alu 0 147 101 7 1160 287 85 0 21 chr17 75399036 75399084 -19873567 + (CCCCCT)n Simple_repeat Simple_repeat 4 50 0 7 1160 296 278 16 87 chr17 75399680 75399806 -19872845 - PB1D10 SINE Alu 0 117 1 7 1160 794 106 0 8 chr17 75400117 75400241 -19872410 + (TCCC)n Simple_repeat Simple_repeat 2 124 0 7 1160 286 329 75 91 chr17 75400507 75400815 -19871836 - ORR1E LTR MaLR -17 342 40 7 1160 690 218 95 11 chr17 75401192 75401382 -19871269 + MER121 Unknown Unknown 99 304 -108 7 1160 300 53 0 0 chr17 75401828 75401866 -19870785 + (TTTTC)n Simple_repeat Simple_repeat 3 40 0 7 1160 621 105 0 0 chr17 75401871 75401966 -19870685 + (TC)n Simple_repeat Simple_repeat 2 96 0 7 1160 1056 75 0 0 chr17 75401985 75402118 -19870533 - B1_Mus1 SINE Alu -15 133 1 7 1160 374 57 19 0 chr17 75402186 75402239 -19870412 + (TATG)n Simple_repeat Simple_repeat 4 57 0 7 1160 701 320 77 27 chr17 75402252 75402512 -19870139 - B4A SINE B4 -10 282 10 7 1160 317 245 187 9 chr17 75402604 75402711 -19869940 - MIR3 SINE MIR -80 128 3 7 1160 225 0 0 0 chr17 75403448 75403473 -19869178 + (TG)n Simple_repeat Simple_repeat 2 26 0 7 1160 668 208 249 0 chr17 75403895 75404068 -19868583 - B3 SINE B2 0 216 1 7 1160 486 0 0 0 chr17 75404226 75404280 -19868371 + (GA)n Simple_repeat Simple_repeat 1 54 0 7 1160 279 228 18 0 chr17 75407191 75407248 -19865403 - ID SINE ID -153 71 14 7 1160 4532 78 10 3 chr17 75407504 75408099 -19864552 - L1Md_F2 LINE L1 -10 6572 5974 7 1160 874 216 43 57 chr17 75408218 75408429 -19864222 - B3 SINE B2 -8 208 1 7 1160 603 238 140 0 chr17 75408609 75408752 -19863899 + B4 SINE B4 125 287 -5 7 1160 712 216 0 26 chr17 75409076 75409228 -19863423 - B1_Mur4 SINE Alu -2 148 1 7 1160 344 284 0 0 chr17 75409966 75410040 -19862611 + B4 SINE B4 217 290 -2 7 1160 261 0 0 0 chr17 75410713 75410742 -19861909 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 1160 528 16 0 0 chr17 75410742 75410802 -19861849 + (GA)n Simple_repeat Simple_repeat 1 61 0 7 1160 505 203 143 50 chr17 75410802 75410942 -19861709 - B3 SINE B2 -61 155 3 7 1160 260 299 52 103 chr17 75411056 75411250 -19861401 + MIRc SINE MIR 35 218 -50 7 1160 889 283 55 11 chr17 75411811 75412020 -19860631 + B4A SINE B4 1 213 -79 7 1160 288 0 0 0 chr17 75412020 75412052 -19860599 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 7 1160 889 283 55 11 chr17 75412052 75412117 -19860534 + B4A SINE B4 214 287 -5 7 1160 405 0 0 0 chr17 75412164 75412209 -19860442 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 1160 258 105 0 0 chr17 75412321 75412359 -19860292 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 7 1160 189 375 42 51 chr17 75413452 75413570 -19859081 - L2b LINE L2 -1 3374 3258 7 1160 462 36 0 0 chr17 75413703 75413759 -19858892 + (CAAG)n Simple_repeat Simple_repeat 4 59 0 7 1160 685 290 124 55 chr17 75414715 75415062 -19857589 - MLT1B LTR MaLR 0 390 20 7 1160 480 100 0 0 chr17 75415623 75415703 -19856948 + (TC)n Simple_repeat Simple_repeat 1 80 0 7 1160 498 269 92 20 chr17 75415703 75415855 -19856796 - RSINE1 SINE B4 -2 163 1 7 1160 475 298 14 38 chr17 75415973 75416186 -19856465 - B3 SINE B2 -8 208 1 7 1160 405 0 0 0 chr17 75417128 75417173 -19855478 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1160 821 118 15 0 chr17 75419762 75419898 -19852753 + (TTCC)n Simple_repeat Simple_repeat 3 140 0 7 1160 583 239 29 15 chr17 75420026 75420162 -19852489 + B1F1 SINE Alu 8 145 -4 7 1160 734 257 14 82 chr17 75420171 75420379 -19852272 + B3A SINE B2 1 194 -4 7 1160 414 0 0 0 chr17 75420402 75420448 -19852203 + (CAAAA)n Simple_repeat Simple_repeat 3 48 0 7 1160 204 313 67 34 chr17 75421167 75421286 -19851365 + MER5A DNA MER1_type 63 185 -4 7 1160 404 231 218 34 chr17 75421739 75421918 -19850733 - B3 SINE B2 -4 212 1 7 1160 225 156 0 43 chr17 75421924 75421971 -19850680 + CT-rich Low_complexity Low_complexity 4 48 0 7 1160 243 0 0 0 chr17 75422059 75422086 -19850565 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 1160 462 331 28 0 chr17 75422166 75422308 -19850343 - RSINE1 SINE B4 -3 162 17 7 1160 216 0 0 0 chr17 75422506 75422530 -19850121 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1160 440 285 24 42 chr17 75422660 75422825 -19849826 - RSINE1 SINE B4 0 165 4 7 1160 1793 302 75 26 chr17 75422850 75423747 -19848904 - L1MC1 LINE L1 -36 6297 5357 7 1160 180 97 0 0 chr17 75423780 75423811 -19848840 + (T)n Simple_repeat Simple_repeat 1 31 0 7 1160 544 286 0 20 chr17 75423845 75423995 -19848656 - RSINE1 SINE B4 -17 148 2 7 1160 591 257 46 0 chr17 75424056 75424208 -19848443 - RSINE1 SINE B4 -2 163 5 7 1160 499 184 92 0 chr17 75424452 75424550 -19848101 + B1_Mus1 SINE Alu 7 113 -35 7 1160 306 258 98 38 chr17 75424550 75424683 -19847968 - RMER20B LTR ERVK 0 516 376 7 1160 470 171 151 9 chr17 75424882 75424988 -19847663 - RMER20B LTR ERVK -506 121 1 7 1160 333 0 0 0 chr17 75425216 75425253 -19847398 + (TC)n Simple_repeat Simple_repeat 2 38 0 7 1160 661 298 60 63 chr17 75425487 75425838 -19846813 + Lx8 LINE L1 7123 7472 -1 7 1160 319 206 170 30 chr17 75426382 75426482 -19846169 + PB1D7 SINE Alu 2 115 -5 7 1160 918 236 128 16 chr17 75427584 75427842 -19844809 + ORR1E LTR MaLR 3 289 -70 7 1160 255 93 0 0 chr17 75428432 75428475 -19844176 + (T)n Simple_repeat Simple_repeat 1 43 0 7 1160 352 259 53 9 chr17 75429405 75429518 -19843133 + MLT1D LTR MaLR 23 140 -365 7 1160 510 321 9 60 chr17 75429610 75429842 -19842809 + MLT1D LTR MaLR 278 497 -8 7 1160 438 304 134 62 chr17 75429902 75430207 -19842444 - Lx8 LINE L1 0 7473 7147 7 1160 457 214 46 38 chr17 75431060 75431191 -19841460 - LTR37A LTR ERV1 -1 425 294 7 1160 211 225 68 27 chr17 75431719 75431792 -19840859 + MIR SINE MIR 108 183 -79 7 1160 344 307 9 38 chr17 75432256 75432361 -19840290 + RSINE1 SINE B4 2 103 -62 7 1160 260 239 0 0 chr17 75432358 75432404 -19840247 - B1_Mus1 SINE Alu -97 51 6 7 1160 343 260 62 118 chr17 75432409 75432553 -19840098 - B1_Mur2 SINE Alu -13 136 1 7 1160 1301 229 22 113 chr17 75434333 75434688 -19837963 + MTE2a LTR MaLR 57 379 0 7 1160 456 51 0 0 chr17 75436052 75436111 -19836540 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 1160 253 306 65 30 chr17 75436393 75436553 -19836098 - MIRb SINE MIR -24 184 25 7 1160 252 356 83 48 chr17 75436762 75436930 -19835721 - MIRb SINE MIR -1 261 88 7 1160 609 225 175 12 chr17 75436933 75437104 -19835547 - MTD LTR MaLR 0 419 221 7 1160 304 293 27 23 chr17 75437281 75437411 -19835240 - MTD LTR MaLR -295 124 5 7 1160 189 314 47 0 chr17 75437657 75437743 -19834908 - MER5A DNA MER1_type -73 116 27 7 1160 234 312 70 18 chr17 75437850 75437964 -19834687 - MIRb SINE MIR -28 240 121 7 1160 688 243 150 14 chr17 75438088 75438301 -19834350 - MLT1A0 LTR MaLR -13 352 111 7 1160 1932 201 90 40 chr17 75438344 75438822 -19833829 - RLTR12B LTR ERVK -25 503 2 7 1160 299 218 6 12 chr17 75438822 75438890 -19833761 - MLT1A0 LTR MaLR -281 93 31 7 1160 195 42 0 0 chr17 75438890 75438914 -19833737 + (TGG)n Simple_repeat Simple_repeat 1 24 0 7 1160 281 231 31 62 chr17 75438914 75438940 -19833711 - MLT1A0 LTR MaLR -335 30 2 7 1160 2178 103 13 3 chr17 75439099 75439409 -19833242 - ORR1A2 LTR MaLR -14 313 1 7 1160 242 276 225 49 chr17 75439648 75439892 -19832759 + MLT1A LTR MaLR 5 291 -83 7 1160 417 316 83 6 chr17 75439971 75440127 -19832524 + MER5A DNA MER1_type 2 169 -20 7 1160 209 216 118 0 chr17 75440323 75440374 -19832277 - MER5B DNA MER1_type -105 73 17 7 1160 242 179 0 18 chr17 75440553 75440610 -19832041 + GA-rich Low_complexity Low_complexity 2 57 0 7 1160 231 258 0 16 chr17 75440921 75440984 -19831667 + (TAA)n Simple_repeat Simple_repeat 1 62 0 7 1160 3005 188 38 34 chr17 75441005 75441645 -19831006 - RLTR26 LTR ERVK 0 642 1 7 1160 257 308 14 71 chr17 75442080 75442220 -19830431 - MER5A1 DNA MER1_type -15 151 20 8 1160 298 228 116 32 chr17 75442708 75442803 -19829848 + Lx9 LINE L1 5804 5906 -1738 8 1160 305 109 18 0 chr17 75442811 75442866 -19829785 + (TG)n Simple_repeat Simple_repeat 1 56 0 8 1160 1172 148 67 63 chr17 75443497 75443720 -19828931 - URR1B DNA MER1_type -1 224 1 8 1160 25 31 0 0 chr17 75443793 75443825 -19828826 + AT_rich Low_complexity Low_complexity 1 32 0 8 1160 24 32 0 0 chr17 75443924 75443955 -19828696 + AT_rich Low_complexity Low_complexity 1 31 0 8 1160 303 175 0 0 chr17 75444111 75444168 -19828483 + (TG)n Simple_repeat Simple_repeat 1 57 0 8 1160 3385 131 66 36 chr17 75444324 75444988 -19827663 - RMER6C LTR ERVK -6 684 1 8 1160 483 229 45 18 chr17 75445017 75445128 -19827523 - PB1D10 SINE Alu 0 117 4 8 1160 2045 147 14 14 chr17 75445291 75445650 -19827001 + ORR1B2 LTR MaLR 1 359 -8 8 1160 280 327 28 0 chr17 75445784 75445891 -19826760 + L3 LINE CR1 4230 4339 -150 8 1160 22 0 0 0 chr17 75445941 75445963 -19826688 + AT_rich Low_complexity Low_complexity 1 22 0 8 1160 1246 48 0 0 chr17 75445963 75446109 -19826542 - B1_Mus2 SINE Alu 0 147 2 8 1160 2852 182 35 28 chr17 75446174 75446745 -19825906 - RMER15 LTR ERVL 0 575 1 8 1160 540 291 0 152 chr17 75446869 75447080 -19825571 + B3A SINE B2 1 179 -19 8 1160 289 167 0 0 chr17 75447129 75447183 -19825468 - L1MB8 LINE L1 -13 6165 6112 8 1160 323 335 88 6 chr17 75448237 75448396 -19824255 - B4 SINE B4 -119 173 2 8 1160 249 250 111 0 chr17 75448467 75448539 -19824112 - ID4_ SINE ID -2 81 2 8 1160 195 184 0 0 chr17 75449162 75449200 -19823451 + T-rich Low_complexity Low_complexity 1 38 0 8 1160 210 310 160 0 chr17 75449470 75449570 -19823081 - MIR SINE MIR -37 225 110 8 1160 544 257 73 0 chr17 75449842 75449978 -19822673 + RSINE1 SINE B4 1 146 -19 8 1160 384 22 0 0 chr17 75450005 75450050 -19822601 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 1160 1152 64 0 0 chr17 75450669 75450810 -19821841 - B1_Mus2 SINE Alu -6 141 1 8 1160 322 217 37 19 chr17 75451162 75451270 -19821381 - L2 LINE L2 -747 2672 2563 8 1160 276 236 43 121 chr17 75451329 75451469 -19821182 + MLT1C LTR MaLR 31 159 -308 8 1160 252 136 0 0 chr17 75451481 75451525 -19821126 - URR1B DNA MER1_type 0 225 182 8 1160 310 329 118 30 chr17 75451529 75451893 -19820758 - L2 LINE L2 -1098 2321 1926 8 1160 262 341 68 97 chr17 75452305 75452685 -19819966 - MLT1A LTR MaLR 0 374 6 8 1160 644 263 62 5 chr17 75452682 75452892 -19819759 + MLT1B LTR MaLR 54 275 -115 8 1160 333 0 0 0 chr17 75453312 75453349 -19819302 + (TG)n Simple_repeat Simple_repeat 1 37 0 8 1160 465 282 96 62 chr17 75453355 75453627 -19819024 - B4A SINE B4 -11 281 1 8 1160 22 0 0 0 chr17 75453628 75453650 -19819001 + AT_rich Low_complexity Low_complexity 1 22 0 8 1160 587 191 175 5 chr17 75453688 75453850 -19818801 - B3A SINE B2 -36 180 1 8 1160 611 230 11 73 chr17 75455106 75455284 -19817367 + B4A SINE B4 3 169 -123 8 1160 189 74 0 0 chr17 75456787 75456814 -19815837 + (TATG)n Simple_repeat Simple_repeat 4 30 0 8 1160 602 248 39 0 chr17 75456820 75456973 -19815678 - B3A SINE B2 -39 159 1 8 1160 390 299 9 9 chr17 75457238 75457346 -19815305 + PB1D10 SINE Alu 10 117 0 8 1160 649 243 86 11 chr17 75457484 75457671 -19814980 + RMER30 DNA MER1_type 2 202 0 8 1160 258 281 144 10 chr17 75457766 75457863 -19814788 + B4A SINE B4 1 110 -182 8 1160 284 221 128 13 chr17 75457882 75457960 -19814691 + B4A SINE B4 149 235 -57 8 1160 375 241 28 55 chr17 75458239 75458384 -19814267 - L1M5 LINE L1 -2110 4036 3896 8 1160 888 10 0 0 chr17 75458385 75458486 -19814165 + (TTC)n Simple_repeat Simple_repeat 2 102 0 8 1160 451 262 9 0 chr17 75458701 75458808 -19813843 - B1F SINE Alu 0 149 42 8 1160 227 281 17 17 chr17 75459294 75459352 -19813299 - ID_B1 SINE B4 -86 138 81 8 1160 207 0 0 0 chr17 75459428 75459451 -19813200 + (T)n Simple_repeat Simple_repeat 1 23 0 8 1160 289 311 14 56 chr17 75459799 75459831 -19812820 + RMER15 LTR ERVL 434 466 -109 8 1160 2517 66 22 12 chr17 75459831 75460155 -19812496 + ORR1A2 LTR MaLR 1 327 0 8 1160 289 311 14 56 chr17 75460155 75460265 -19812386 + RMER15 LTR ERVL 467 570 -5 8 1160 478 142 41 24 chr17 75460661 75460784 -19811867 + (TATG)n Simple_repeat Simple_repeat 4 128 0 8 1160 957 271 45 31 chr17 75460797 75461083 -19811568 - B4A SINE B4 0 292 3 8 1160 626 133 0 0 chr17 75461952 75462050 -19810601 + MTC LTR MaLR 1 98 -323 8 1160 1095 139 0 0 chr17 75462059 75462239 -19810412 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 8 1160 231 36 0 0 chr17 75462241 75462269 -19810382 + (TCCC)n Simple_repeat Simple_repeat 4 31 0 8 1160 352 113 0 40 chr17 75462264 75462338 -19810313 + T-rich Low_complexity Low_complexity 3 73 0 8 1160 2607 118 25 39 chr17 75462342 75462782 -19809869 - Lx3B LINE L1 -2 6971 6538 8 1160 1581 147 51 7 chr17 75462787 75463062 -19809589 + MTC LTR MaLR 135 421 0 8 1160 491 312 36 54 chr17 75463752 75464030 -19808621 + B4A SINE B4 2 274 -18 8 1160 180 0 0 0 chr17 75464043 75464063 -19808588 + (CA)n Simple_repeat Simple_repeat 2 21 0 8 1160 302 61 20 0 chr17 75464111 75464160 -19808491 + (CA)n Simple_repeat Simple_repeat 2 51 0 8 1160 189 0 0 0 chr17 75464208 75464229 -19808422 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 1160 522 159 8 16 chr17 75464269 75464397 -19808254 + (CA)n Simple_repeat Simple_repeat 2 128 0 8 1160 1721 154 80 12 chr17 75464504 75464840 -19807811 - ORR1B2 LTR MaLR -8 359 1 8 1160 332 326 43 21 chr17 75464889 75465030 -19807621 + MIR SINE MIR 9 152 -110 8 1160 588 224 97 38 chr17 75465840 75466026 -19806625 + B3 SINE B2 15 211 -5 8 1160 2496 38 0 0 chr17 75466029 75466322 -19806329 - L1Md_T LINE L1 -1 6581 6289 8 1160 365 308 55 14 chr17 75466813 75466958 -19805693 - Tigger16a DNA Tigger -1 932 782 8 1160 230 288 52 92 chr17 75467207 75467360 -19805291 - MIRb SINE MIR -23 245 99 8 1160 448 202 0 4 chr17 75467733 75467826 -19804825 - B1_Mur4 SINE Alu -43 104 14 8 1160 222 174 0 0 chr17 75467831 75467877 -19804774 + (TATG)n Simple_repeat Simple_repeat 2 47 0 8 1160 509 277 29 0 chr17 75467879 75468016 -19804635 - B4 SINE B4 -148 144 4 8 1160 1502 274 116 55 chr17 75468056 75468712 -19803939 - Lx8 LINE L1 -1 7472 6777 8 1160 805 275 26 34 chr17 75469372 75469636 -19803015 - RMER5 LTR ERV1 -41 493 232 8 1160 323 250 60 0 chr17 75469709 75469793 -19802858 - RMER5 LTR ERV1 -426 108 20 8 1160 963 80 65 0 chr17 75469880 75470018 -19802633 + B1_Mus2 SINE Alu 1 147 0 8 1160 224 0 65 0 chr17 75470038 75470069 -19802582 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 8 1160 808 198 109 6 chr17 75470097 75470280 -19802371 - B3 SINE B2 -14 202 1 8 1160 190 233 0 0 chr17 75470761 75470804 -19801847 - L2 LINE L2 -377 3042 3000 8 1160 442 304 119 21 chr17 75471164 75471473 -19801178 - MLT1F1 LTR MaLR -39 530 165 8 1160 972 245 97 20 chr17 75471671 75472013 -19800638 + MTE2b LTR MaLR 2 369 -10 8 1160 180 0 0 0 chr17 75472352 75472372 -19800279 + (TGGGGG)n Simple_repeat Simple_repeat 2 21 0 8 1160 692 234 51 61 chr17 75472654 75472777 -19799874 - B4 SINE B4 -79 213 90 8 1160 321 26 0 0 chr17 75472777 75472815 -19799836 + (ATG)n Simple_repeat Simple_repeat 3 40 0 8 1160 692 234 51 61 chr17 75472815 75472905 -19799746 - B4 SINE B4 -203 89 2 8 1160 289 310 22 71 chr17 75474560 75474699 -19797952 + B4A SINE B4 96 230 -62 8 1160 934 214 39 19 chr17 75474699 75474904 -19797747 + B3 SINE B2 1 209 -7 8 1160 289 310 22 71 chr17 75474904 75474948 -19797703 + B4A SINE B4 231 270 -22 8 1160 711 71 0 10 chr17 75475393 75475493 -19797158 + B1_Mm SINE Alu 3 101 -46 8 1160 316 295 21 10 chr17 75475495 75475591 -19797060 - B4A SINE B4 -195 97 1 8 1160 180 381 19 0 chr17 75475909 75476014 -19796637 - MIR SINE MIR -2 260 154 8 1160 280 284 76 17 chr17 75476017 75476135 -19796516 - MLT1A1 LTR MaLR 0 408 284 8 1160 441 332 82 13 chr17 75476562 75476867 -19795784 - MLT1D LTR MaLR 0 505 180 8 1160 182 176 53 13 chr17 75476876 75476951 -19795700 + CT-rich Low_complexity Low_complexity 2 79 0 8 1160 283 282 14 0 chr17 75476972 75477043 -19795608 - PB1D10 SINE Alu -21 96 25 8 1160 1307 162 9 5 chr17 75477634 75477857 -19794794 + URR1A DNA MER1_type 1 224 -2 8 1160 2274 139 168 34 chr17 75479458 75479957 -19792694 - RMER15 LTR ERVL -7 568 3 8 1160 325 284 14 10 chr17 75481259 75481361 -19791290 - MIR SINE MIR -158 110 6 8 1160 445 239 32 4 chr17 75481405 75481518 -19791133 + B1F1 SINE Alu 6 119 -1 8 1160 396 0 0 0 chr17 75481797 75481841 -19790810 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 1160 21 0 0 0 chr17 75482823 75482844 -19789807 + AT_rich Low_complexity Low_complexity 1 21 0 8 1160 1377 95 21 5 chr17 75482988 75483179 -19789472 - B2_Mm2 SINE B2 0 195 2 8 1160 23 0 0 0 chr17 75483241 75483264 -19789387 + AT_rich Low_complexity Low_complexity 1 23 0 8 1160 522 83 0 0 chr17 75483264 75483336 -19789315 + (TG)n Simple_repeat Simple_repeat 1 72 0 8 1160 276 285 114 43 chr17 75483339 75483601 -19789050 - RSINE1 SINE B4 -3 289 3 8 1160 438 173 211 46 chr17 75483747 75483856 -19788795 - B1_Mus1 SINE Alu 0 148 22 8 1160 190 274 0 61 chr17 75483886 75483952 -19788699 - L2a LINE L2 0 3426 3365 8 1160 257 243 17 195 chr17 75485593 75485767 -19786884 + RMER15 LTR ERVL 17 159 -416 8 1160 21 71 0 0 chr17 75486208 75486250 -19786401 + AT_rich Low_complexity Low_complexity 1 42 0 8 1160 867 269 39 0 chr17 75486252 75486460 -19786191 - B3 SINE B2 0 216 1 8 1160 848 118 0 7 chr17 75487882 75488019 -19784632 + (TCC)n Simple_repeat Simple_repeat 3 138 0 8 1160 230 170 18 36 chr17 75488623 75488678 -19783973 + (TATATG)n Simple_repeat Simple_repeat 3 56 0 8 1160 2732 152 79 6 chr17 75489710 75490201 -19782450 - RLTR11A LTR ERVK 0 528 2 9 1160 346 304 57 78 chr17 75490691 75490987 -19781664 - L1M5 LINE L1 -1513 4633 4344 9 1160 302 304 118 24 chr17 75491091 75491337 -19781314 - L1M5 LINE L1 -2098 4048 3780 9 1160 897 255 5 9 chr17 75491427 75491637 -19781014 + B3 SINE B2 2 210 -6 9 1160 562 263 32 41 chr17 75492544 75492762 -19779889 - ID_B1 SINE B4 -7 217 2 9 1160 2680 166 42 29 chr17 75492958 75493478 -19779173 - RLTR11A2 LTR ERVK 0 527 1 9 1160 1125 36 58 0 chr17 75494737 75494876 -19777775 + B1_Mus1 SINE Alu 1 147 -1 9 1160 258 206 0 0 chr17 75495139 75495202 -19777449 + (TG)n Simple_repeat Simple_repeat 2 64 0 9 1160 731 272 173 13 chr17 75495236 75495467 -19777184 - B4A SINE B4 0 292 25 9 1160 664 239 123 52 chr17 75496201 75496510 -19776141 - L1M5 LINE L1 -561 5618 5288 9 1161 1083 272 13 59 chr17 75498529 75498834 -19773817 + B4A SINE B4 2 292 0 9 1161 378 276 34 89 chr17 75499519 75499595 -19773056 - Charlie5 DNA MER1_type -2 2622 2549 9 1161 1964 53 0 0 chr17 75499595 75499839 -19772812 + L1Md_A LINE L1 6339 6582 0 9 1161 378 276 34 89 chr17 75499839 75499997 -19772654 - Charlie5 DNA MER1_type -76 2548 2401 9 1161 323 322 161 28 chr17 75500909 75501166 -19771485 + B4 SINE B4 2 292 0 1 1161 607 229 96 30 chr17 75502260 75502458 -19770193 + B3 SINE B2 2 212 -4 2 1161 508 278 60 101 chr17 75502598 75502940 -19769711 - ORR1E LTR MaLR -35 344 1 3 1161 1110 96 11 33 chr17 75502991 75503175 -19769476 - L1_Mus3 LINE L1 -7 6631 6452 4 1161 1324 103 16 0 chr17 75503667 75503852 -19768799 - B2_Mm2 SINE B2 -5 190 3 5 1161 422 236 219 24 chr17 75503904 75504073 -19768578 - RMER15 LTR ERVL -16 559 358 6 1161 280 256 29 81 chr17 75504131 75504267 -19768384 - RMER15 LTR ERVL -444 131 3 6 1161 703 255 88 83 chr17 75504739 75505150 -19767501 - L1MD3 LINE L1 -15 7980 7568 7 1161 804 280 26 5 chr17 75505211 75505405 -19767246 + B3A SINE B2 1 198 0 8 1161 609 245 172 0 chr17 75505531 75505682 -19766969 - ID_B1 SINE B4 -38 186 10 9 1161 246 232 28 28 chr17 75505843 75505914 -19766737 - L1MD3 LINE L1 -1016 6979 6909 7 1161 246 264 56 22 chr17 75505938 75506027 -19766624 - L1MD3 LINE L1 -19 6314 6223 7 1161 792 0 0 0 chr17 75507107 75507195 -19765456 + (GGA)n Simple_repeat Simple_repeat 3 90 0 1 1161 235 107 35 18 chr17 75507672 75507729 -19764922 + A-rich Low_complexity Low_complexity 2 59 0 1 1161 881 115 229 27 chr17 75507842 75508030 -19764621 - URR1A DNA MER1_type 0 226 1 1 1161 378 0 0 0 chr17 75508057 75508099 -19764552 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1161 474 18 0 0 chr17 75508738 75508793 -19763858 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1161 906 126 35 12 chr17 75509143 75509312 -19763339 + URR1A DNA MER1_type 54 226 0 1 1161 345 312 46 23 chr17 75511228 75511262 -19761389 - MLT1F2 LTR MaLR -327 233 195 1 1161 1392 237 57 20 chr17 75511262 75511615 -19761036 - ORR1D2 LTR MaLR -2 368 3 1 1161 345 312 46 23 chr17 75511615 75511711 -19760940 - MLT1F2 LTR MaLR -366 194 100 1 1161 556 74 10 10 chr17 75511728 75511824 -19760827 + (TC)n Simple_repeat Simple_repeat 1 96 0 1 1161 321 47 0 0 chr17 75511824 75511867 -19760784 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1161 261 0 0 0 chr17 75513000 75513029 -19759622 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1161 231 36 0 0 chr17 75513043 75513071 -19759580 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 1161 579 195 0 0 chr17 75513100 75513218 -19759433 + (CATATA)n Simple_repeat Simple_repeat 6 123 0 2 1161 708 189 105 61 chr17 75513218 75513419 -19759232 + Lx2B LINE L1 6792 7000 0 2 1161 22 35 0 0 chr17 75515617 75515646 -19757005 + AT_rich Low_complexity Low_complexity 1 29 0 2 1161 808 248 42 140 chr17 75515760 75516117 -19756534 + Lx8 LINE L1 6966 7287 -186 2 1161 504 274 123 50 chr17 75517146 75517407 -19755244 - B4A SINE B4 -10 282 3 2 1161 551 250 123 12 chr17 75517636 75517806 -19754845 - MTD LTR MaLR -14 405 217 2 1161 2235 80 0 0 chr17 75517811 75518122 -19754529 - ORR1A2 LTR MaLR 0 327 17 2 1161 683 238 102 15 chr17 75518172 75518368 -19754283 - Lx8 LINE L1 -3 7470 7258 2 1161 243 321 93 19 chr17 75518460 75518622 -19754029 - MamGypLTR1c LTR Gypsy -618 185 12 3 1161 180 200 0 0 chr17 75519426 75519466 -19753185 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1161 362 316 104 30 chr17 75519933 75520304 -19752347 + MLT1C LTR MaLR 59 458 -9 3 1161 221 245 0 19 chr17 75520522 75520576 -19752075 + CT-rich Low_complexity Low_complexity 3 55 0 3 1161 355 312 153 0 chr17 75520914 75521084 -19751567 + B4A SINE B4 37 232 -60 3 1161 213 39 0 0 chr17 75521094 75521120 -19751531 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 1161 242 254 28 0 chr17 75521127 75521198 -19751453 + (CATA)n Simple_repeat Simple_repeat 3 75 0 3 1161 21 0 0 0 chr17 75521279 75521300 -19751351 + AT_rich Low_complexity Low_complexity 1 21 0 3 1161 788 205 124 21 chr17 75521300 75521494 -19751157 - B3 SINE B2 0 216 3 3 1161 431 325 72 13 chr17 75521676 75521829 -19750822 + RSINE1 SINE B4 4 165 0 3 1161 315 0 0 0 chr17 75521834 75521869 -19750782 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1161 284 241 0 7 chr17 75522813 75522951 -19749700 + (TG)n Simple_repeat Simple_repeat 2 138 0 4 1161 192 40 0 0 chr17 75522990 75523015 -19749636 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 4 1161 617 176 6 3 chr17 75523016 75523381 -19749270 + (TG)n Simple_repeat Simple_repeat 1 366 0 4 1161 413 373 6 6 chr17 75523404 75523566 -19749085 - Lx8 LINE L1 -159 7314 7153 4 1161 436 258 10 0 chr17 75524163 75524260 -19748391 + PB1D10 SINE Alu 1 98 -19 4 1161 672 271 67 5 chr17 75524434 75524642 -19748009 + ID_B1 SINE B4 3 223 -1 4 1161 209 346 13 0 chr17 75524671 75524749 -19747902 + L2a LINE L2 3299 3377 -49 4 1161 888 251 76 79 chr17 75525246 75525601 -19747050 + MTE2a LTR MaLR 26 379 0 4 1161 229 250 19 0 chr17 75525611 75525663 -19746988 + MER20 DNA MER1_type 167 219 0 4 1161 813 249 15 15 chr17 75526068 75526145 -19746506 + ID SINE ID 3 79 -145 5 1161 451 275 30 22 chr17 75526145 75526279 -19746372 + B1F SINE Alu 1 135 -14 5 1161 265 257 0 28 chr17 75527489 75527561 -19745090 + CT-rich Low_complexity Low_complexity 2 71 0 5 1161 248 49 49 0 chr17 75528781 75528822 -19743829 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 5 1161 640 228 0 0 chr17 75528841 75528968 -19743683 - B1_Mur2 SINE Alu -21 128 2 5 1161 211 321 24 12 chr17 75529575 75529657 -19742994 - ID4_ SINE ID 0 83 1 5 1161 183 188 0 0 chr17 75530342 75530390 -19742261 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1161 323 70 105 0 chr17 75530411 75530468 -19742183 + HAL1-3A_ME LINE L1 1976 2038 -820 5 1161 300 261 11 32 chr17 75531186 75531281 -19741370 + MIR3 SINE MIR 95 187 -21 5 1161 272 289 137 65 chr17 75531999 75532247 -19740404 + L1MEb LINE L1 358 623 -5447 5 1161 1440 78 10 10 chr17 75532392 75532586 -19740065 - B2_Mm2 SINE B2 0 195 2 6 1161 261 261 43 0 chr17 75532639 75532708 -19739943 - PB1D10 SINE Alu -33 84 13 6 1161 511 122 122 0 chr17 75532744 75532842 -19739809 - B1_Mur4 SINE Alu 0 150 41 6 1161 462 116 79 40 chr17 75533186 75533312 -19739339 - Lx LINE L1 -46 6608 6478 6 1161 457 227 0 49 chr17 75533879 75533981 -19738670 - B1F2 SINE Alu -11 138 42 6 1161 630 293 0 47 chr17 75534025 75534197 -19738454 - RSINE1 SINE B4 0 165 2 6 1161 497 282 27 7 chr17 75534350 75534500 -19738151 - Tigger7 DNA MER2_type 0 2491 2339 6 1161 213 39 0 0 chr17 75534562 75534588 -19738063 + (CAAG)n Simple_repeat Simple_repeat 2 27 0 6 1161 363 105 0 0 chr17 75534594 75534651 -19738000 + (GGAA)n Simple_repeat Simple_repeat 3 59 0 6 1161 25 51 0 0 chr17 75534859 75534898 -19737753 + AT_rich Low_complexity Low_complexity 1 39 0 6 1161 453 66 0 0 chr17 75535121 75535182 -19737469 + (TC)n Simple_repeat Simple_repeat 2 62 0 7 1161 241 302 111 74 chr17 75535237 75535480 -19737171 - B4A SINE B4 0 292 41 7 1161 261 0 0 0 chr17 75535702 75535731 -19736920 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 1161 567 0 0 0 chr17 75535731 75535793 -19736858 + (GA)n Simple_repeat Simple_repeat 1 63 0 7 1161 213 173 0 37 chr17 75536930 75536984 -19735667 + (CAGGG)n Simple_repeat Simple_repeat 3 54 0 7 1161 283 170 0 0 chr17 75537354 75537407 -19735244 - ORR1C2 LTR MaLR -1 383 331 7 1161 8288 46 2 1 chr17 75537412 75539093 -19733558 - L1Md_F2 LINE L1 -12 6570 4888 7 1161 527 197 79 30 chr17 75539093 75539308 -19733343 - ORR1C2 LTR MaLR -33 351 21 7 1161 237 270 118 20 chr17 75539400 75539502 -19733149 - L1MC5 LINE L1 -576 7385 7274 7 1161 241 290 32 11 chr17 75539611 75539705 -19732946 + CT-rich Low_complexity Low_complexity 2 97 0 7 1161 247 346 131 36 chr17 75539841 75540063 -19732588 + Tigger5 DNA MER2_type 2 244 -2162 7 1161 230 293 77 8 chr17 75540159 75540276 -19732375 - MLT2C1 LTR ERVL -37 526 402 8 1161 738 53 0 0 chr17 75540740 75540835 -19731816 + (TCTA)n Simple_repeat Simple_repeat 2 96 0 8 1161 341 352 39 54 chr17 75540864 75541179 -19731472 - L1M3 LINE L1 -2949 3197 2881 8 1161 2207 146 93 10 chr17 75541179 75541566 -19731085 - MTC LTR MaLR -2 419 1 8 1161 341 347 36 50 chr17 75541566 75541761 -19730890 - L1M3 LINE L1 -3260 2880 2695 8 1161 1562 117 118 16 chr17 75542116 75542429 -19730222 - IAPLTR4 LTR ERVK 0 345 1 8 1161 195 100 0 0 chr17 75542672 75542702 -19729949 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 1161 617 261 0 7 chr17 75542702 75542837 -19729814 - RSINE1 SINE B4 -24 141 8 8 1161 294 73 0 0 chr17 75542886 75542927 -19729724 + (CCA)n Simple_repeat Simple_repeat 2 42 0 8 1161 767 88 9 0 chr17 75544057 75544170 -19728481 + (TCTA)n Simple_repeat Simple_repeat 2 115 0 8 1161 407 305 35 28 chr17 75544248 75544393 -19728258 + ID_B1 SINE B4 1 146 -78 8 1161 373 279 92 15 chr17 75544556 75544687 -19727964 - ID_B1 SINE B4 -18 206 66 9 1161 780 287 64 10 chr17 75544688 75544984 -19727667 + Lx7 LINE L1 7107 7418 -278 9 1161 198 0 0 0 chr17 75545084 75545106 -19727545 + (GA)n Simple_repeat Simple_repeat 2 23 0 9 1161 600 14 0 0 chr17 75545106 75545175 -19727476 + (GAA)n Simple_repeat Simple_repeat 3 71 0 9 1161 720 162 7 49 chr17 75545271 75545414 -19727237 + B1_Mur4 SINE Alu 14 150 0 9 1161 1748 31 0 43 chr17 75545420 75545653 -19726998 - L1Md_F3 LINE L1 -1 6583 6361 9 1161 386 306 74 8 chr17 75545777 75545899 -19726752 - RSINE1 SINE B4 -8 157 28 9 1161 1143 78 31 77 chr17 75545925 75546119 -19726532 - B2_Mm2 SINE B2 -9 186 2 9 1161 212 179 0 0 chr17 75546128 75546167 -19726484 + T-rich Low_complexity Low_complexity 1 39 0 9 1161 922 273 102 0 chr17 75549154 75549410 -19723241 + B4A SINE B4 5 286 -6 9 1161 309 221 10 40 chr17 75549411 75549510 -19723141 + (CATATA)n Simple_repeat Simple_repeat 2 97 0 1 1161 210 175 25 0 chr17 75549733 75549773 -19722878 + (TATG)n Simple_repeat Simple_repeat 3 43 0 1 1161 1120 95 0 0 chr17 75549787 75549935 -19722716 - B1_Mus1 SINE Alu 0 148 1 1 1161 306 0 0 0 chr17 75552247 75552281 -19720370 + (TC)n Simple_repeat Simple_repeat 1 34 0 1 1161 393 22 0 0 chr17 75552281 75552326 -19720325 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1161 201 210 0 0 chr17 75553316 75553378 -19719273 + (TAGA)n Simple_repeat Simple_repeat 4 65 0 1 1161 230 219 122 0 chr17 75553951 75554033 -19718618 - MER58D DNA MER1_type -4 382 291 1 1161 600 14 0 0 chr17 75554139 75554208 -19718443 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 1161 848 315 29 7 chr17 75554277 75554555 -19718096 - B4A SINE B4 -8 284 1 1 1161 253 103 0 0 chr17 75554848 75554887 -19717764 - B3 SINE B2 -177 39 1 1 1161 306 0 0 0 chr17 75554931 75554965 -19717686 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1161 751 301 74 43 chr17 75554972 75555229 -19717422 - B4A SINE B4 -26 266 2 1 1161 603 40 0 0 chr17 75556582 75556656 -19715995 + (GA)n Simple_repeat Simple_repeat 1 74 0 1 1161 290 117 0 32 chr17 75556712 75556774 -19715877 + (CAGAGA)n Simple_repeat Simple_repeat 3 62 0 1 1161 1585 160 105 17 chr17 75558433 75558777 -19713874 - ORR1B1 LTR MaLR 0 394 21 1 1161 288 0 0 0 chr17 75559097 75559129 -19713522 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1161 963 269 46 25 chr17 75559157 75559439 -19713212 - B4A SINE B4 -1 291 4 1 1161 264 324 0 0 chr17 75559469 75559540 -19713111 - ID4 SINE ID -8 75 5 1 1161 331 276 8 33 chr17 75559540 75559660 -19712991 - PB1D10 SINE Alu 0 117 1 1 1161 360 0 0 0 chr17 75559807 75559847 -19712804 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1161 270 56 0 0 chr17 75559847 75559883 -19712768 + (GA)n Simple_repeat Simple_repeat 2 37 0 1 1161 183 42 0 0 chr17 75560037 75560061 -19712590 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 1161 395 226 13 93 chr17 75560211 75560362 -19712289 - B4 SINE B4 -153 139 1 1 1161 277 125 56 0 chr17 75561224 75561296 -19711355 + (TCTCTG)n Simple_repeat Simple_repeat 3 78 0 1 1161 180 0 0 0 chr17 75562249 75562269 -19710382 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1161 249 246 0 0 chr17 75562277 75562342 -19710309 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 1161 330 87 0 0 chr17 75563183 75563229 -19709422 + (CAA)n Simple_repeat Simple_repeat 2 47 0 1 1161 901 139 0 0 chr17 75563229 75563358 -19709293 - B1_Mus2 SINE Alu -18 129 1 1 1161 1643 26 0 16 chr17 75563365 75563558 -19709093 - B2_Mm1a SINE B2 -2 191 2 1 1161 324 158 0 0 chr17 75563781 75563838 -19708813 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1161 1308 285 43 30 chr17 75563854 75564474 -19708177 - L1MA4 LINE L1 -374 5926 5296 1 1161 183 80 0 0 chr17 75565200 75565225 -19707426 + (GAAA)n Simple_repeat Simple_repeat 3 27 0 1 1161 227 189 0 0 chr17 75565227 75565264 -19707387 - L1MA4 LINE L1 -676 5171 5135 1 1161 470 288 25 0 chr17 75565536 75565654 -19706997 - RSINE1 SINE B4 -19 146 26 1 1161 345 24 0 0 chr17 75566300 75566342 -19706309 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1161 279 0 0 0 chr17 75566422 75566453 -19706198 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 1 1161 385 19 0 36 chr17 75566793 75566849 -19705802 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 1161 243 0 0 0 chr17 75566849 75566876 -19705775 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1161 323 336 188 26 chr17 75566934 75567163 -19705488 - B4 SINE B4 -6 286 21 1 1161 189 107 0 0 chr17 75568590 75568618 -19704033 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1 1161 402 173 0 28 chr17 75568716 75568823 -19703828 + CT-rich Low_complexity Low_complexity 1 104 0 1 1161 567 319 31 55 chr17 75569706 75569998 -19702653 - B4A SINE B4 0 292 8 1 1161 24 53 0 0 chr17 75570417 75570455 -19702196 + AT_rich Low_complexity Low_complexity 1 38 0 1 1161 338 281 85 40 chr17 75570825 75571025 -19701626 - L2a LINE L2 -246 3180 2972 1 1161 252 0 0 0 chr17 75571426 75571454 -19701197 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 1161 275 329 34 34 chr17 75571484 75571632 -19701019 - L2a LINE L2 -1366 2053 1906 1 1161 288 0 0 0 chr17 75571655 75571687 -19700964 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1161 205 301 0 41 chr17 75571791 75571888 -19700763 + GA-rich Low_complexity Low_complexity 1 93 0 1 1161 240 274 56 96 chr17 75571927 75572052 -19700599 - RMER10A LTR ERVL -305 137 18 1 1161 460 364 21 39 chr17 75572667 75572901 -19699750 - B4A SINE B4 -62 230 1 1 1161 22 0 0 0 chr17 75575239 75575261 -19697390 + AT_rich Low_complexity Low_complexity 1 22 0 1 1161 441 268 70 7 chr17 75575655 75575798 -19696853 - B3A SINE B2 -45 153 2 1 1161 1003 134 6 6 chr17 75576002 75576182 -19696469 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1 1161 606 253 20 7 chr17 75576207 75576354 -19696297 - B1F1 SINE Alu 0 149 1 1 1161 445 194 88 44 chr17 75577217 75577330 -19695321 - MER58A DNA MER1_type -104 120 3 1 1161 282 193 0 0 chr17 75578236 75578293 -19694358 + T-rich Low_complexity Low_complexity 1 57 0 1 1161 432 0 0 0 chr17 75578625 75578673 -19693978 + (TC)n Simple_repeat Simple_repeat 2 49 0 1 1161 272 295 13 0 chr17 75580045 75580123 -19692528 - ID4 SINE ID 0 83 5 1 1161 441 0 0 0 chr17 75580174 75580223 -19692428 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 1161 243 343 46 0 chr17 75581136 75581244 -19691407 - MER58A DNA MER1_type -43 181 69 1 1161 217 268 0 18 chr17 75581983 75582040 -19690611 + ID4_ SINE ID 2 57 -26 1 1161 432 0 0 0 chr17 75582356 75582404 -19690247 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1161 446 206 0 73 chr17 75584000 75584178 -19688473 + GA-rich Low_complexity Low_complexity 1 165 0 1 1161 235 125 75 0 chr17 75584182 75584262 -19688389 + (CAGG)n Simple_repeat Simple_repeat 2 87 0 1 1161 601 148 0 29 chr17 75584267 75584371 -19688280 + B1_Mur1 SINE Alu 42 142 -7 1 1161 25 31 0 0 chr17 75584525 75584557 -19688094 + AT_rich Low_complexity Low_complexity 1 32 0 1 1161 347 289 31 0 chr17 75584624 75584721 -19687930 - L2a LINE L2 -5 3421 3322 1 1161 739 292 66 31 chr17 75584771 75585089 -19687562 + L1MB2 LINE L1 5838 6166 -5 1 1161 1812 147 45 64 chr17 75585134 75585511 -19687140 - ORR1D1 LTR MaLR -4 370 1 1 1161 191 306 156 9 chr17 75585620 75585729 -19686922 - L2a LINE L2 -185 3241 3117 1 1161 273 331 71 35 chr17 75585807 75585913 -19686738 - Lx6 LINE L1 -30 7430 7328 1 1161 285 29 0 0 chr17 75585913 75585947 -19686704 + (CAAT)n Simple_repeat Simple_repeat 2 35 0 1 1161 273 331 71 35 chr17 75585947 75585959 -19686692 - Lx6 LINE L1 -133 7327 7317 1 1161 342 0 0 0 chr17 75585959 75585997 -19686654 + (CAA)n Simple_repeat Simple_repeat 2 39 0 1 1161 273 331 71 35 chr17 75585997 75586046 -19686605 - Lx6 LINE L1 -144 7316 7256 1 1161 1291 264 84 16 chr17 75586074 75586455 -19686196 - Lx7 LINE L1 -377 7319 6913 1 1161 392 0 0 20 chr17 75586819 75586868 -19685783 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1161 297 0 0 0 chr17 75587800 75587833 -19684818 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1161 594 0 0 0 chr17 75587833 75587898 -19684753 + (GA)n Simple_repeat Simple_repeat 1 66 0 1 1161 234 292 0 0 chr17 75587951 75588016 -19684635 + ID4_ SINE ID 2 66 -17 1 1161 313 147 13 26 chr17 75588488 75588565 -19684086 + CT-rich Low_complexity Low_complexity 3 78 0 1 1161 378 0 0 0 chr17 75589264 75589306 -19683345 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1161 886 282 8 58 chr17 75591221 75591481 -19681170 - B4 SINE B4 -45 247 1 1 1161 649 312 44 40 chr17 75592793 75593076 -19679575 - ORR1D1 LTR MaLR -79 299 1 1 1161 480 224 0 10 chr17 75594176 75594275 -19678376 - PB1D10 SINE Alu -7 110 13 1 1161 487 219 95 30 chr17 75594283 75594452 -19678199 - L1MB4 LINE L1 -354 5826 5647 1 1161 216 0 0 0 chr17 75594661 75594685 -19677966 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1161 597 315 69 26 chr17 75594768 75595117 -19677534 - L1MB4 LINE L1 -542 5638 5275 1 1161 297 299 0 0 chr17 75596320 75596407 -19676244 + (ATGGTG)n Simple_repeat Simple_repeat 2 88 0 1 1161 329 283 22 0 chr17 75596407 75596499 -19676152 - PB1D10 SINE Alu -14 103 10 1 1161 201 39 0 0 chr17 75596617 75596643 -19676008 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1161 947 152 48 21 chr17 75597029 75597217 -19675434 + URR1A DNA MER1_type 34 226 0 1 1161 238 262 37 24 chr17 75597218 75597300 -19675351 - MTE2b LTR MaLR -289 90 8 1 1161 500 278 7 67 chr17 75597648 75597783 -19674868 - ID_B1 SINE B4 -22 202 76 1 1161 237 305 112 7 chr17 75598395 75598547 -19674104 + LTR90A LTR LTR 195 362 -614 1 1161 286 292 10 20 chr17 75598879 75598977 -19673674 + LTR90A LTR LTR 868 964 -12 1 1161 805 240 23 0 chr17 75599669 75599844 -19672807 - B3A SINE B2 -18 180 2 1 1161 1004 293 29 4 chr17 75599917 75600191 -19672460 + B4A SINE B4 8 288 -4 1 1161 341 96 0 0 chr17 75600197 75600249 -19672402 + HAL1-3A_ME LINE L1 1971 2022 -836 1 1161 437 232 0 7 chr17 75600251 75600394 -19672257 + (CA)n Simple_repeat Simple_repeat 1 142 0 1 1161 246 329 13 0 chr17 75600407 75600486 -19672165 + (CA)n Simple_repeat Simple_repeat 2 81 0 1 1161 228 100 0 0 chr17 75600799 75600839 -19671812 + (A)n Simple_repeat Simple_repeat 1 40 0 1 1161 183 348 76 25 chr17 75601596 75601714 -19670937 + MIRb SINE MIR 36 159 -109 1 1161 1032 132 184 60 chr17 75603761 75603962 -19668689 - URR1A DNA MER1_type 0 226 1 1 1161 471 238 95 48 chr17 75604952 75605120 -19667531 + ID_B1 SINE B4 49 224 0 1 1161 23 33 0 0 chr17 75605319 75605349 -19667302 + AT_rich Low_complexity Low_complexity 1 30 0 1 1161 344 315 148 66 chr17 75606046 75606423 -19666228 + Tigger13a DNA MER2_type 1 408 -363 1 1161 596 281 110 71 chr17 75606766 75607076 -19665575 + MTE2a LTR MaLR 4 325 -54 1 1161 961 201 20 30 chr17 75607275 75607475 -19665176 - B3 SINE B2 -8 208 11 2 1161 21 0 0 0 chr17 75607520 75607541 -19665110 + AT_rich Low_complexity Low_complexity 1 21 0 2 1161 21 57 0 0 chr17 75608184 75608219 -19664432 + AT_rich Low_complexity Low_complexity 1 35 0 2 1161 393 239 11 0 chr17 75608471 75608559 -19664092 + PB1D10 SINE Alu 19 107 -10 2 1161 210 360 47 23 chr17 75608875 75609003 -19663648 - MIR SINE MIR -45 217 87 2 1161 329 252 45 27 chr17 75609855 75609965 -19662686 + L2a LINE L2 3310 3421 -5 2 1161 889 242 31 23 chr17 75610533 75610791 -19661860 - RMER15 LTR ERVL -34 541 282 2 1161 272 242 59 59 chr17 75610963 75611064 -19661587 - MLT1A0 LTR MaLR -264 101 1 2 1161 555 56 0 0 chr17 75612344 75612415 -19660236 + (GA)n Simple_repeat Simple_repeat 2 72 0 2 1161 305 199 0 117 chr17 75613060 75613248 -19659403 + G-rich Low_complexity Low_complexity 1 166 0 2 1161 800 267 59 102 chr17 75613795 75614099 -19658552 + B4 SINE B4 2 292 0 2 1161 459 0 0 0 chr17 75614110 75614161 -19658490 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1161 302 143 16 0 chr17 75614881 75614944 -19657707 + A-rich Low_complexity Low_complexity 2 65 0 2 1161 4457 49 6 8 chr17 75616091 75616610 -19656041 - L1Md_F2 LINE L1 -1 6581 6064 2 1161 436 19 0 0 chr17 75616610 75616663 -19655988 + L1Md_F2 LINE L1 6003 6055 -527 2 1161 32 26 0 0 chr17 75616821 75616860 -19655791 + AT_rich Low_complexity Low_complexity 1 39 0 2 1161 725 197 22 14 chr17 75617363 75617502 -19655149 - B1_Mur1 SINE Alu -9 140 1 2 1161 495 271 11 73 chr17 75617502 75617542 -19655109 - ID_B1 SINE B4 -9 215 48 2 1161 221 0 35 0 chr17 75617559 75617588 -19655063 + (TGG)n Simple_repeat Simple_repeat 3 32 0 2 1161 342 0 0 0 chr17 75617588 75617626 -19655025 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1161 406 274 66 15 chr17 75617718 75617855 -19654796 - Tigger6a DNA MER2_type -213 870 727 2 1161 882 169 7 13 chr17 75617865 75618015 -19654636 + URR1A DNA MER1_type 13 161 -65 2 1161 555 16 0 0 chr17 75618039 75618103 -19654548 + (CA)n Simple_repeat Simple_repeat 2 65 0 2 1161 471 337 23 0 chr17 75618199 75618371 -19654280 - Tigger6a DNA MER2_type -707 376 201 2 1161 214 375 36 40 chr17 75618902 75619155 -19653496 + L2 LINE L2 2711 2962 -457 2 1161 27 29 0 0 chr17 75619639 75619673 -19652978 + AT_rich Low_complexity Low_complexity 1 34 0 2 1161 19626 111 4 11 chr17 75619673 75623368 -19649283 - L1_Mus3 LINE L1 -7 6631 2963 2 1161 261 0 0 0 chr17 75623435 75623464 -19649187 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 1161 225 226 84 6 chr17 75625060 75625158 -19647493 + MIRm SINE MIR 63 160 -48 2 1161 1122 85 7 0 chr17 75625277 75625418 -19647233 - B1_Mus1 SINE Alu -6 142 1 2 1161 21 0 0 0 chr17 75625851 75625872 -19646779 + AT_rich Low_complexity Low_complexity 1 21 0 2 1161 859 230 12 47 chr17 75625912 75626081 -19646570 - RSINE1 SINE B4 0 165 3 2 1161 382 331 48 30 chr17 75626700 75626865 -19645786 + MER58B DNA MER1_type 169 336 -5 2 1161 297 0 0 0 chr17 75626941 75626974 -19645677 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1161 252 240 31 20 chr17 75627355 75627453 -19645198 - Lx9 LINE L1 -16 7628 7530 2 1161 245 288 100 17 chr17 75627867 75627987 -19644664 + MIRc SINE MIR 125 254 -14 2 1162 1513 57 0 58 chr17 75629815 75630020 -19642631 + L1_Mus2 LINE L1 6374 6566 0 2 1162 35 63 0 0 chr17 75630346 75630409 -19642242 + AT_rich Low_complexity Low_complexity 1 63 0 2 1162 4360 79 5 13 chr17 75630518 75631071 -19641580 - Lx2 LINE L1 -2 6995 6447 2 1162 256 375 30 38 chr17 75631093 75631226 -19641425 - RSINE1 SINE B4 -13 152 21 2 1162 197 0 0 67 chr17 75631245 75631275 -19641376 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 2 1162 21 0 0 0 chr17 75631638 75631659 -19640992 + AT_rich Low_complexity Low_complexity 1 21 0 2 1162 416 365 48 57 chr17 75633696 75634048 -19638603 - ORR1E LTR MaLR -10 349 1 2 1162 212 265 0 0 chr17 75634099 75634148 -19638503 + GA-rich Low_complexity Low_complexity 3 51 0 2 1162 868 224 0 0 chr17 75634431 75634578 -19638073 + RSINE1 SINE B4 2 148 -17 2 1162 463 279 115 38 chr17 75636291 75636474 -19636177 - B3A SINE B2 0 198 2 2 1162 241 353 60 87 chr17 75637655 75637838 -19634813 + MLT1A0 LTR MaLR 3 180 -185 2 1162 204 125 0 0 chr17 75638990 75639022 -19633629 + (A)n Simple_repeat Simple_repeat 1 32 0 2 1162 212 285 126 31 chr17 75640184 75640311 -19632340 - MIR3 SINE MIR -67 141 3 2 1162 220 27 26 26 chr17 75640365 75640403 -19632248 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1162 742 143 192 36 chr17 75640503 75640670 -19631981 + URR1B DNA MER1_type 1 193 -32 2 1162 227 173 0 19 chr17 75640880 75640933 -19631718 + (TATG)n Simple_repeat Simple_repeat 1 52 0 2 1162 851 319 14 20 chr17 75640934 75641228 -19631423 - B4A SINE B4 0 292 1 2 1162 242 208 0 94 chr17 75641419 75641472 -19631179 + LTR45 LTR ERV1 380 427 -98 2 1162 2185 145 52 9 chr17 75641999 75642347 -19630304 - ORR1B2 LTR MaLR -2 365 3 2 1162 195 237 0 0 chr17 75643655 75643693 -19628958 - L3 LINE CR1 -10 4479 4442 2 1162 1760 36 0 0 chr17 75644912 75645105 -19627546 + B2_Mm1t SINE B2 1 193 0 2 1162 261 0 0 0 chr17 75645409 75645438 -19627213 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 1162 2111 57 8 8 chr17 75645842 75646108 -19626543 - L1Md_F2 LINE L1 0 6582 6317 2 1162 234 91 0 0 chr17 75646210 75646243 -19626408 + (ATG)n Simple_repeat Simple_repeat 2 34 0 2 1162 24 0 0 0 chr17 75646501 75646525 -19626126 + AT_rich Low_complexity Low_complexity 1 24 0 2 1162 323 213 0 21 chr17 75648511 75648607 -19624044 + CT-rich Low_complexity Low_complexity 3 96 0 2 1162 967 232 103 0 chr17 75649391 75649585 -19623066 - B3 SINE B2 -2 214 1 2 1162 316 203 34 0 chr17 75652850 75652909 -19619742 - B1_Mur1 SINE Alu -21 128 68 2 1162 207 0 0 0 chr17 75652924 75652947 -19619704 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 2 1162 420 97 0 0 chr17 75653686 75653748 -19618903 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 1162 359 333 0 0 chr17 75653775 75653877 -19618774 + PB1D10 SINE Alu 3 104 -13 2 1162 555 304 80 25 chr17 75654976 75655175 -19617476 + ID_B1 SINE B4 1 210 -14 2 1162 330 350 20 86 chr17 75655874 75656118 -19616533 - L1ME3A LINE L1 -3 6170 5943 2 1162 289 246 0 28 chr17 75656158 75656229 -19616422 + CT-rich Low_complexity Low_complexity 3 71 0 2 1162 210 302 32 0 chr17 75657269 75657332 -19615319 + ID4 SINE ID 6 70 -13 2 1162 289 314 56 16 chr17 75657340 75657466 -19615185 - Charlie2a DNA MER1_type -2717 144 14 2 1162 777 318 14 14 chr17 75657558 75657775 -19614876 - B4A SINE B4 -75 217 1 2 1162 1780 160 125 8 chr17 75657789 75658142 -19614509 - MTC LTR MaLR -27 394 1 2 1162 222 383 0 9 chr17 75658589 75658705 -19613946 - MIR3 SINE MIR -9 199 85 2 1162 1597 248 114 83 chr17 75659045 75659538 -19613113 - RLTR18B LTR ERVK 0 512 5 2 1162 267 354 0 0 chr17 75659560 75659642 -19613009 - ID4_ SINE ID 0 83 2 2 1162 657 266 7 14 chr17 75661107 75661252 -19611399 + B1F SINE Alu 5 148 -1 2 1162 351 65 0 0 chr17 75661582 75661628 -19611023 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1162 292 287 198 5 chr17 75661729 75661946 -19610705 + L1ME3 LINE L1 5788 6046 -116 2 1162 585 255 23 150 chr17 75661948 75662143 -19610508 - B3A SINE B2 -16 182 5 2 1162 249 33 0 0 chr17 75663239 75663269 -19609382 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1162 182 340 0 0 chr17 75664952 75664999 -19607652 + L2a LINE L2 3344 3390 -36 2 1162 3090 142 136 10 chr17 75665051 75665656 -19606995 - RMER6C LTR ERVK 0 690 10 2 1162 591 207 12 121 chr17 75666221 75666386 -19606265 + B1_Mur4 SINE Alu 3 149 -1 2 1162 297 123 30 15 chr17 75666444 75666510 -19606141 + GA-rich Low_complexity Low_complexity 5 71 0 2 1162 233 320 0 13 chr17 75666603 75666679 -19605972 - MamRep434 DNA TcMar -351 75 1 2 1162 360 0 0 0 chr17 75667062 75667102 -19605549 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1162 1168 271 35 28 chr17 75667219 75667507 -19605144 - B4 SINE B4 0 292 3 2 1162 1324 172 0 10 chr17 75667537 75667743 -19604908 - B3 SINE B2 -8 208 5 2 1162 363 154 0 0 chr17 75668186 75668251 -19604400 + CT-rich Low_complexity Low_complexity 2 66 0 2 1162 735 33 0 0 chr17 75668945 75669035 -19603616 + (TTTC)n Simple_repeat Simple_repeat 1 90 0 2 1162 228 368 48 30 chr17 75669991 75670159 -19602492 - MIRb SINE MIR -71 197 27 2 1162 633 293 31 16 chr17 75670163 75670357 -19602294 + MER58A DNA MER1_type 1 197 -27 2 1162 220 284 164 0 chr17 75670716 75670783 -19601868 - ID4_ SINE ID -1 82 5 2 1162 540 324 18 52 chr17 75671316 75671637 -19601014 - MLT2D LTR ERVL -109 305 3 2 1162 1239 264 38 30 chr17 75671721 75672088 -19600563 - ORR1D2 LTR MaLR 0 370 1 2 1162 233 329 0 34 chr17 75676049 75676137 -19596514 - MER20 DNA MER1_type -7 212 128 2 1162 707 106 0 27 chr17 75676161 75676307 -19596344 + (CA)n Simple_repeat Simple_repeat 2 143 0 2 1162 1257 145 81 10 chr17 75677183 75677392 -19595259 + URR1A DNA MER1_type 1 224 -2 2 1162 383 259 24 0 chr17 75679433 75679518 -19593133 + B4A SINE B4 202 288 -4 2 1162 789 201 14 14 chr17 75680353 75680499 -19592152 + B1_Mur3 SINE Alu 3 148 -1 2 1162 924 79 0 0 chr17 75680499 75680625 -19592026 + (GGAA)n Simple_repeat Simple_repeat 3 128 0 3 1162 549 0 0 0 chr17 75681590 75681651 -19591000 + (TC)n Simple_repeat Simple_repeat 1 61 0 3 1162 489 88 0 0 chr17 75681822 75681902 -19590749 + (TG)n Simple_repeat Simple_repeat 2 81 0 3 1162 291 136 0 0 chr17 75683558 75683617 -19589034 + (TG)n Simple_repeat Simple_repeat 1 59 0 3 1162 458 72 0 8 chr17 75686998 75687067 -19585584 + L1Md_F3 LINE L1 5536 5614 -560 3 1162 8945 33 0 4 chr17 75687068 75688070 -19584581 + L1Md_F3 LINE L1 5587 6584 0 3 1162 2526 56 3 13 chr17 75688684 75688992 -19583659 + L1_Mus2 LINE L1 6261 6565 -1 3 1162 459 52 0 0 chr17 75690015 75690073 -19582578 + (GA)n Simple_repeat Simple_repeat 2 59 0 3 1162 445 141 0 0 chr17 75690898 75690969 -19581682 - L1VL2 LINE L1 -6170 165 95 3 1162 602 284 23 61 chr17 75691165 75691536 -19581115 + Lx7 LINE L1 5552 5925 -231 3 1162 432 37 0 0 chr17 75691548 75691602 -19581049 + (TATG)n Simple_repeat Simple_repeat 4 57 0 3 1162 752 138 7 0 chr17 75691680 75691818 -19580833 + Lx3_Mus LINE L1 6871 7009 0 3 1162 249 159 0 0 chr17 75692860 75692904 -19579747 + CT-rich Low_complexity Low_complexity 2 45 0 3 1162 369 0 0 0 chr17 75694297 75694338 -19578313 + (GA)n Simple_repeat Simple_repeat 1 41 0 3 1162 422 292 60 26 chr17 75694778 75694894 -19577757 + RSINE1 SINE B4 30 149 -16 3 1162 441 0 0 0 chr17 75694896 75694945 -19577706 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 1162 214 280 70 70 chr17 75695934 75696034 -19576617 + B4A SINE B4 82 181 -111 3 1162 395 186 81 11 chr17 75695955 75696042 -19576609 + PB1D10 SINE Alu 17 109 -8 3 1162 398 233 0 0 chr17 75696043 75696116 -19576535 + ID4 SINE ID 3 75 -8 3 1162 749 223 21 52 chr17 75696333 75696527 -19576124 + B3 SINE B2 18 205 -11 3 1162 477 0 0 0 chr17 75696651 75696704 -19575947 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1162 342 0 0 0 chr17 75698109 75698147 -19574504 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1162 434 296 37 7 chr17 75698300 75698436 -19574215 + B1F SINE Alu 1 140 -9 3 1162 1459 148 9 13 chr17 75698450 75698676 -19573975 + URR1B DNA MER1_type 1 225 0 3 1162 208 339 101 6 chr17 75698776 75698945 -19573706 - L2a LINE L2 -52 3374 3190 3 1162 259 316 143 54 chr17 75699061 75699208 -19573443 - B3 SINE B2 -7 209 50 3 1162 512 283 24 48 chr17 75699090 75699216 -19573435 - RSINE1 SINE B4 0 165 43 3 1162 759 263 34 0 chr17 75699583 75699792 -19572859 + B3 SINE B2 1 216 0 3 1162 21 36 0 0 chr17 75699816 75699844 -19572807 + AT_rich Low_complexity Low_complexity 1 28 0 3 1162 663 48 0 0 chr17 75700885 75700968 -19571683 + (TTCC)n Simple_repeat Simple_repeat 3 85 0 3 1162 25 0 0 0 chr17 75700999 75701024 -19571627 + AT_rich Low_complexity Low_complexity 1 25 0 3 1162 1275 89 11 6 chr17 75701033 75701214 -19571437 - B2_Mm2 SINE B2 -7 188 7 3 1162 28 79 0 0 chr17 75702037 75702100 -19570551 + AT_rich Low_complexity Low_complexity 1 63 0 3 1162 333 0 0 0 chr17 75702159 75702196 -19570455 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1162 627 14 0 0 chr17 75702196 75702267 -19570384 + (GA)n Simple_repeat Simple_repeat 2 73 0 3 1162 2371 295 71 12 chr17 75702273 75703641 -19569010 - L1M2 LINE L1 -9 5871 4396 3 1162 273 339 23 31 chr17 75704614 75704742 -19567909 + L3 LINE CR1 2144 2270 -2219 3 1162 206 390 49 49 chr17 75704881 75705188 -19567463 + L3 LINE CR1 2960 3266 -1223 3 1162 429 253 78 226 chr17 75707030 75707260 -19565391 + B3A SINE B2 3 198 0 3 1162 837 63 9 0 chr17 75707261 75707372 -19565279 + B1_Mm SINE Alu 36 147 0 3 1162 1778 242 39 32 chr17 75707423 75707855 -19564796 - Lx5 LINE L1 -5 7045 6611 3 1162 951 297 51 7 chr17 75708090 75708365 -19564286 - B4A SINE B4 -4 288 2 3 1162 192 40 0 0 chr17 75708547 75708572 -19564079 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 3 1162 697 257 97 0 chr17 75708634 75708809 -19563842 - B3 SINE B2 -24 192 1 3 1162 249 293 0 0 chr17 75708834 75708892 -19563759 + MIRm SINE MIR 92 149 -127 3 1162 21 57 0 0 chr17 75710033 75710068 -19562583 + AT_rich Low_complexity Low_complexity 1 35 0 3 1162 905 176 0 7 chr17 75710130 75710266 -19562385 + B1_Mur3 SINE Alu 2 136 -13 3 1162 218 32 32 0 chr17 75710266 75710297 -19562354 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 3 1162 1058 289 93 25 chr17 75710728 75711083 -19561568 - MTE2b LTR MaLR 0 379 1 3 1162 740 11 11 0 chr17 75713351 75713440 -19559211 + (GA)n Simple_repeat Simple_repeat 1 90 0 3 1162 295 221 0 42 chr17 75715084 75715155 -19557496 - MTEa LTR MaLR -5 374 307 3 1162 324 0 0 0 chr17 75715273 75715309 -19557342 + (ATTG)n Simple_repeat Simple_repeat 1 36 0 3 1162 1498 130 100 12 chr17 75715309 75715558 -19557093 - Lx4A LINE L1 -8 7050 6780 3 1162 233 287 95 42 chr17 75715627 75715816 -19556835 + L1M5 LINE L1 5535 5733 -391 3 1162 1036 241 10 0 chr17 75716106 75716309 -19556342 - B3 SINE B2 -11 205 1 3 1162 212 286 70 79 chr17 75717234 75717348 -19555303 - L2a LINE L2 -66 3360 3248 3 1162 393 309 155 35 chr17 75717498 75717931 -19554720 - L2a LINE L2 -925 2494 2010 3 1162 2790 216 66 14 chr17 75718044 75718150 -19554501 - RMER1B Other Other -9 1057 939 3 1162 441 0 0 0 chr17 75718150 75718199 -19554452 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1162 3082 154 40 11 chr17 75718199 75718743 -19553908 - RMER1A Other Other -160 870 311 3 1162 499 243 74 54 chr17 75718740 75718888 -19553763 + RMER1A Other Other 135 285 -745 3 1162 24 0 0 0 chr17 75719810 75719834 -19552817 + AT_rich Low_complexity Low_complexity 1 24 0 3 1162 231 254 141 0 chr17 75719889 75719960 -19552691 + PB1 SINE Alu 38 118 -9 3 1162 251 71 24 0 chr17 75720203 75720245 -19552406 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1162 235 323 107 8 chr17 75721029 75721160 -19551491 - MIRb SINE MIR -69 199 56 3 1162 399 234 0 0 chr17 75721328 75721405 -19551246 + ID4 SINE ID 6 82 -1 3 1162 195 162 0 0 chr17 75722509 75722546 -19550105 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1162 480 239 12 129 chr17 75722549 75722712 -19549939 - RSINE1 SINE B4 -2 163 20 3 1162 1782 271 54 55 chr17 75724167 75724955 -19547696 - L1MA5A LINE L1 -1711 5933 5141 3 1162 834 137 202 6 chr17 75727058 75727241 -19545410 - URR1B DNA MER1_type 0 225 7 3 1162 720 130 0 0 chr17 75730165 75730280 -19542371 + (TC)n Simple_repeat Simple_repeat 1 115 0 3 1162 1183 61 0 33 chr17 75730293 75730306 -19542345 - B1_Mus2 SINE Alu 0 147 139 3 1162 183 42 0 0 chr17 75730306 75730330 -19542321 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 3 1162 1183 61 0 33 chr17 75730330 75730468 -19542183 - B1_Mus2 SINE Alu -9 138 1 3 1162 321 309 0 0 chr17 75730472 75730572 -19542079 - ID4_ SINE ID -51 101 2 3 1162 267 103 0 0 chr17 75731991 75732030 -19540621 + (ATG)n Simple_repeat Simple_repeat 2 40 0 3 1162 195 287 52 21 chr17 75732841 75732937 -19539714 - MIRb SINE MIR -8 260 162 3 1162 210 233 17 0 chr17 75734785 75734845 -19537806 + (TCTCTG)n Simple_repeat Simple_repeat 6 66 0 3 1162 239 287 80 60 chr17 75734872 75734972 -19537679 + PB1D7 SINE Alu 19 120 0 3 1162 195 42 0 0 chr17 75735135 75735159 -19537492 + (CCCCG)n Simple_repeat Simple_repeat 1 24 0 3 1162 23 0 0 0 chr17 75736317 75736340 -19536311 + AT_rich Low_complexity Low_complexity 1 23 0 3 1162 646 223 98 98 chr17 75736376 75736570 -19536081 + B3A SINE B2 1 194 -4 3 1162 970 219 132 55 chr17 75736605 75737105 -19535546 - RMER4B LTR ERVK -11 574 1 3 1162 230 264 131 31 chr17 75737238 75737398 -19535253 - L1ME3A LINE L1 -190 5983 5808 3 1162 528 269 9 15 chr17 75737447 75737730 -19534921 - MTE2b LTR MaLR 0 370 4 3 1162 304 264 25 0 chr17 75737936 75738015 -19534636 + B1F2 SINE Alu 18 96 -51 3 1162 260 333 38 16 chr17 75738161 75738347 -19534304 - L1M5 LINE L1 -2336 3810 3621 3 1162 426 338 27 71 chr17 75738352 75738718 -19533933 + ORR1E LTR MaLR 1 350 -9 3 1162 255 50 75 0 chr17 75738686 75738726 -19533925 + MTEb LTR MaLR 337 379 0 3 1162 396 0 0 0 chr17 75738817 75738861 -19533790 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1162 671 301 115 9 chr17 75739130 75739572 -19533079 - L1M5 LINE L1 -2962 3184 2696 3 1162 1569 200 58 43 chr17 75739573 75739907 -19532744 + MTD LTR MaLR 2 346 -73 3 1162 2614 105 49 3 chr17 75739907 75740298 -19532353 - L1_Mus3 LINE L1 -1 6637 6229 3 1162 1569 200 58 43 chr17 75740298 75740360 -19532291 + MTD LTR MaLR 347 404 -15 3 1162 456 296 74 44 chr17 75740399 75740696 -19531955 - L1M5 LINE L1 -3493 2653 2348 3 1162 1054 131 16 5 chr17 75740953 75741137 -19531514 + URR1A DNA MER1_type 41 226 0 3 1162 205 315 11 0 chr17 75742514 75742603 -19530048 + MIR SINE MIR 61 150 -112 3 1162 2988 58 13 0 chr17 75743139 75743518 -19529133 - L1Md_F2 LINE L1 -1 6581 6198 3 1162 21 36 0 0 chr17 75744515 75744543 -19528108 + AT_rich Low_complexity Low_complexity 1 28 0 3 1162 213 309 47 58 chr17 75745229 75745401 -19527250 - L2 LINE L2 -576 2843 2674 3 1162 933 246 14 14 chr17 75746821 75747031 -19525620 + B3 SINE B2 1 210 -6 3 1162 1460 257 51 64 chr17 75747040 75747631 -19525020 + L1MA5 LINE L1 5428 6010 -290 3 1162 918 257 5 9 chr17 75749945 75750157 -19522494 + B3 SINE B2 5 215 -1 3 1162 201 143 0 0 chr17 75750844 75750879 -19521772 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1162 861 129 71 14 chr17 75751487 75751628 -19521023 + B1_Mur4 SINE Alu 2 150 0 3 1162 265 38 17 117 chr17 75751628 75751688 -19520963 + A-rich Low_complexity Low_complexity 1 54 0 3 1162 1961 171 110 10 chr17 75752288 75752671 -19519980 - MTC LTR MaLR 0 421 1 3 1162 246 125 0 0 chr17 75753152 75753200 -19519451 + (T)n Simple_repeat Simple_repeat 1 48 0 3 1162 190 290 0 31 chr17 75753575 75753639 -19519012 + L2c LINE L2 3098 3159 -228 4 1162 406 252 0 70 chr17 75753769 75753884 -19518767 + PB1D10 SINE Alu 11 117 0 4 1162 212 143 0 23 chr17 75754074 75754117 -19518534 + CT-rich Low_complexity Low_complexity 3 44 0 4 1162 750 101 0 0 chr17 75754117 75754226 -19518425 + (TCCCC)n Simple_repeat Simple_repeat 5 113 0 4 1162 1124 90 0 14 chr17 75754226 75754373 -19518278 - B1_Mus1 SINE Alu -3 145 1 4 1162 246 136 0 0 chr17 75755723 75755767 -19516884 + (TATATG)n Simple_repeat Simple_repeat 3 46 0 4 1162 741 23 0 0 chr17 75755770 75755857 -19516794 + (GA)n Simple_repeat Simple_repeat 2 88 0 4 1162 543 159 32 0 chr17 75756777 75756903 -19515748 + CT-rich Low_complexity Low_complexity 3 132 0 4 1162 1445 43 16 5 chr17 75757258 75757446 -19515205 - L1_Mus1 LINE L1 -1 6566 6377 4 1162 21 0 0 0 chr17 75757884 75757905 -19514746 + AT_rich Low_complexity Low_complexity 1 21 0 4 1162 249 159 0 0 chr17 75759093 75759137 -19513514 + GA-rich Low_complexity Low_complexity 1 44 0 4 1162 280 274 88 59 chr17 75759258 75759272 -19513379 - B3A SINE B2 -57 141 2 4 1162 296 311 74 0 chr17 75759272 75759394 -19513257 - B4A SINE B4 -160 132 2 4 145 655 261 0 0 chr17 75759592 75759734 -19512917 + B1_Mur1 SINE Alu 2 143 -6 4 1163 867 76 0 0 chr17 75759825 75759944 -19512707 - B1_Mus1 SINE Alu 0 148 30 4 1163 23 0 0 0 chr17 75761700 75761723 -19510928 + AT_rich Low_complexity Low_complexity 1 23 0 4 1163 360 0 0 0 chr17 75763956 75763996 -19508655 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1163 414 0 0 0 chr17 75764138 75764184 -19508467 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1163 1713 198 91 8 chr17 75764461 75764647 -19508004 - ORR1C2 LTR MaLR -3 381 186 4 1163 279 0 0 0 chr17 75764647 75764678 -19507973 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1163 441 0 0 0 chr17 75764678 75764726 -19507925 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 1163 1713 198 91 8 chr17 75764726 75764890 -19507761 - ORR1C2 LTR MaLR -199 185 4 4 1163 563 292 0 13 chr17 75764957 75765113 -19507538 + RSINE1 SINE B4 12 165 0 4 1163 26 0 0 0 chr17 75766017 75766043 -19506608 + AT_rich Low_complexity Low_complexity 1 26 0 4 1163 778 233 5 122 chr17 75767179 75767384 -19505267 + B3A SINE B2 2 182 -16 4 1163 467 186 10 0 chr17 75769272 75769374 -19503277 + (TA)n Simple_repeat Simple_repeat 1 103 0 4 1163 501 17 0 0 chr17 75770115 75770173 -19502478 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 1163 274 226 0 0 chr17 75770193 75770246 -19502405 - RSINE1 SINE B4 -109 56 4 4 1163 22 35 0 0 chr17 75770796 75770825 -19501826 + AT_rich Low_complexity Low_complexity 1 29 0 4 1163 21 0 0 0 chr17 75772538 75772559 -19500092 + AT_rich Low_complexity Low_complexity 1 21 0 4 1163 775 243 24 9 chr17 75772599 75772811 -19499840 + ID_B1 SINE B4 3 217 -7 4 1163 538 148 171 8 chr17 75773440 75773563 -19499088 - URR1B DNA MER1_type 0 225 83 4 1163 808 167 23 23 chr17 75773709 75773881 -19498770 + B2_Mm2 SINE B2 1 172 -23 4 1163 256 303 13 0 chr17 75775002 75775078 -19497573 + ID4 SINE ID 2 78 -5 4 1163 1087 108 6 6 chr17 75775198 75775366 -19497285 + B2_Mm2 SINE B2 1 168 -27 4 1163 201 74 0 0 chr17 75775368 75775395 -19497256 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1163 1098 219 64 91 chr17 75776284 75776367 -19496284 + Lx7 LINE L1 7301 7363 -333 4 1163 216 67 0 0 chr17 75776367 75776397 -19496254 + (ATTG)n Simple_repeat Simple_repeat 2 31 0 4 1163 1098 219 64 91 chr17 75776397 75776565 -19496086 + Lx7 LINE L1 7364 7542 -154 4 1163 189 0 0 0 chr17 75776565 75776586 -19496065 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 4 1163 1098 219 64 91 chr17 75776586 75776740 -19495911 + Lx7 LINE L1 7543 7696 0 4 1163 576 130 0 0 chr17 75776848 75776940 -19495711 + (CTA)n Simple_repeat Simple_repeat 3 94 0 4 1163 268 289 20 10 chr17 75777015 75777113 -19495538 - L1MB5 LINE L1 0 6174 6076 4 1163 21 0 0 0 chr17 75777599 75777620 -19495031 + AT_rich Low_complexity Low_complexity 1 21 0 4 1163 274 261 29 0 chr17 75778448 75778517 -19494134 - B4A SINE B4 -131 161 91 4 1163 322 211 0 0 chr17 75778461 75778518 -19494133 - B1F2 SINE Alu -88 61 5 4 1163 342 45 0 0 chr17 75778892 75778936 -19493715 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1163 369 191 51 56 chr17 75778959 75779137 -19493514 + (TG)n Simple_repeat Simple_repeat 2 178 0 4 1163 832 146 7 7 chr17 75780552 75780690 -19491961 + B1_Mur2 SINE Alu 5 142 -7 4 1163 1123 195 28 5 chr17 75781129 75781340 -19491311 + B3 SINE B2 1 216 0 4 1163 191 330 20 40 chr17 75781391 75781492 -19491159 - MIRb SINE MIR -160 108 10 4 1163 24 0 0 0 chr17 75782375 75782399 -19490252 + AT_rich Low_complexity Low_complexity 1 24 0 4 1163 592 235 65 14 chr17 75782768 75782906 -19489745 - RSINE1 SINE B4 -15 150 6 4 1163 1035 172 14 9 chr17 75783205 75783428 -19489223 + RLTR11B LTR ERVK 139 362 -91 4 1163 186 43 0 0 chr17 75784169 75784192 -19488459 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1163 236 233 69 11 chr17 75784608 75784695 -19487956 + MER5A DNA MER1_type 49 140 -49 4 1163 261 0 0 0 chr17 75784943 75784972 -19487679 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 4 1163 614 110 0 29 chr17 75785561 75785664 -19486987 - RMER10B LTR ERVL 0 398 299 4 1163 393 235 18 73 chr17 75786582 75786600 -19486051 - MER58B DNA MER1_type -15 326 313 4 1163 2513 135 125 23 chr17 75786600 75787079 -19485572 - RLTR11A LTR ERVK 0 528 1 4 1163 393 235 18 73 chr17 75787079 75787170 -19485481 - MER58B DNA MER1_type -29 312 223 4 1163 1885 154 81 9 chr17 75787268 75787602 -19485049 + Lx4B LINE L1 6190 6547 -511 4 1163 258 286 46 31 chr17 75789018 75789148 -19483503 + L1MB2 LINE L1 6037 6168 -3 4 1163 866 270 81 24 chr17 75790826 75791160 -19481491 + MLT1B LTR MaLR 38 390 0 4 1163 448 323 50 80 chr17 75791457 75791820 -19480831 + MLT1D LTR MaLR 124 475 -30 4 1163 640 188 186 6 chr17 75791946 75792107 -19480544 + B4 SINE B4 41 230 -62 4 1163 857 168 0 51 chr17 75792109 75792266 -19480385 + B1_Mur3 SINE Alu 1 149 0 4 1163 603 156 22 7 chr17 75792267 75792403 -19480248 + GA-rich Low_complexity Low_complexity 3 140 0 4 1163 24 0 0 0 chr17 75792534 75792558 -19480093 + AT_rich Low_complexity Low_complexity 1 24 0 4 1163 417 289 66 20 chr17 75793714 75793912 -19478739 + L1M2 LINE L1 2403 2609 -4240 4 1163 222 208 0 0 chr17 75794150 75794198 -19478453 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1163 258 314 43 7 chr17 75794249 75794387 -19478264 + L1M2 LINE L1 3735 3877 -2968 4 1163 313 384 20 0 chr17 75794634 75794780 -19477871 - Lx8 LINE L1 -800 6673 6525 4 1163 2321 280 48 57 chr17 75794830 75795606 -19477045 - RMER15-int LTR ERVL -4 4995 4227 4 1163 1208 99 22 0 chr17 75795606 75795788 -19476863 - B2_Mm2 SINE B2 -9 186 1 4 1163 275 319 26 26 chr17 75795789 75795905 -19476746 - Lx8 LINE L1 -1165 6308 6193 4 1163 213 149 21 0 chr17 75796151 75796198 -19476453 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 4 1163 941 174 0 0 chr17 75796198 75796342 -19476309 - B1_Mur4 SINE Alu -6 144 1 4 1163 284 363 51 5 chr17 75796347 75796563 -19476088 - L1M3f LINE L1 -4331 2518 2293 4 1163 356 240 0 39 chr17 75796651 75796729 -19475922 - ID2 SINE ID -1 82 8 4 1163 343 268 198 40 chr17 75796831 75797154 -19475497 - L1M3f LINE L1 -4113 1735 1362 4 1163 727 277 182 28 chr17 75797898 75798217 -19474434 + Lx8 LINE L1 7065 7432 -41 4 1163 1188 68 0 0 chr17 75798306 75798453 -19474198 + B1_Mus2 SINE Alu 1 147 0 4 1163 325 117 0 38 chr17 75798454 75798534 -19474117 + (CAAA)n Simple_repeat Simple_repeat 1 77 0 4 1163 36135 35 0 0 chr17 75798596 75803963 -19468688 + L1Md_T LINE L1 126 5589 -297 4 1163 9194 4 0 0 chr17 75803963 75804959 -19467692 + L1Md_T LINE L1 5590 6585 0 4 1163 1194 258 146 19 chr17 75804960 75805254 -19467397 + L1M2 LINE L1 5395 5707 -1138 4 1163 1313 119 0 0 chr17 75805254 75805439 -19467212 + B2_Mm2 SINE B2 2 186 -9 4 1163 1194 258 146 19 chr17 75805439 75805720 -19466931 + L1M2 LINE L1 5708 6043 -802 4 1163 311 328 0 49 chr17 75807030 75807152 -19465499 - LTR16A LTR ERVL 0 451 336 4 1163 216 200 0 0 chr17 75807444 75807489 -19465162 + T-rich Low_complexity Low_complexity 1 45 0 4 1163 24147 96 19 108 chr17 75807495 75812323 -19460328 - Lx3B LINE L1 -5 6968 2223 4 1163 1213 209 69 64 chr17 75812323 75812742 -19459909 + RMER16 LTR ERVK 113 533 0 4 1163 24147 96 19 108 chr17 75812742 75813146 -19459505 - Lx3B LINE L1 -5 2222 1824 4 1163 4021 202 51 53 chr17 75813126 75814196 -19458455 - L1_Mur1 LINE L1 -5707 1275 208 4 1163 181 0 69 0 chr17 75814218 75814247 -19458404 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 4 1163 1100 65 0 0 chr17 75814247 75814385 -19458266 - B1_Mus2 SINE Alu -9 138 1 4 1163 720 313 85 47 chr17 75814523 75814995 -19457656 - Charlie7 DNA MER1_type -1436 1176 687 4 1163 323 319 0 22 chr17 75815047 75815164 -19457487 - PB1D7 SINE Alu -32 117 6 4 1163 477 34 0 0 chr17 75815231 75815290 -19457361 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1163 205 182 0 22 chr17 75815366 75815411 -19457240 + T-rich Low_complexity Low_complexity 3 46 0 4 1163 666 187 8 0 chr17 75815417 75815551 -19457100 - B1_Mus1 SINE Alu -1 147 13 4 1163 343 244 58 98 chr17 75815551 75815579 -19457072 - B4 SINE B4 -63 225 71 4 1163 1721 147 9 60 chr17 75815579 75815913 -19456738 + ORR1A4 LTR MaLR 3 319 -10 4 1163 309 246 15 0 chr17 75815917 75815982 -19456669 - ID4_ SINE ID -8 75 10 4 1163 717 278 34 0 chr17 75816018 75816223 -19456428 - ID_B1 SINE B4 -3 221 10 4 1163 549 244 30 0 chr17 75816590 75816721 -19455930 - B1F SINE Alu -13 136 2 4 1163 450 293 0 0 chr17 75817513 75817612 -19455039 - PB1D10 SINE Alu -15 102 4 4 1163 1076 57 14 21 chr17 75818152 75818295 -19454356 - B1_Mm SINE Alu -5 142 1 4 1163 180 327 68 19 chr17 75820799 75820902 -19451749 + MER5A DNA MER1_type 64 171 -18 4 1163 345 100 0 0 chr17 75820980 75821030 -19451621 + (TTTTG)n Simple_repeat Simple_repeat 3 52 0 4 1163 245 273 0 0 chr17 75821274 75821329 -19451322 + MTEa LTR MaLR 1 55 -324 4 1163 549 243 90 94 chr17 75821360 75821605 -19451046 + MTEa LTR MaLR 135 378 -1 4 1163 1819 205 117 34 chr17 75821620 75822175 -19450476 - RMER13B LTR ERVK -36 872 272 5 1163 1503 203 13 90 chr17 75822194 75822670 -19449981 - RMER17B LTR ERVK -519 439 1 5 1163 42 48 0 0 chr17 75822957 75823020 -19449631 + AT_rich Low_complexity Low_complexity 1 63 0 5 1163 36218 34 1 0 chr17 75823479 75829169 -19443482 + L1Md_T LINE L1 1 5589 -297 5 1163 9156 7 0 0 chr17 75829169 75830165 -19442486 + L1Md_T LINE L1 5590 6585 0 5 1163 555 267 29 35 chr17 75830693 75830864 -19441787 + B3 SINE B2 1 170 -46 5 1163 189 0 0 0 chr17 75830871 75830892 -19441759 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1163 719 217 7 0 chr17 75830906 75831044 -19441607 - B1_Mur2 SINE Alu -5 144 6 5 1163 222 37 0 0 chr17 75831051 75831078 -19441573 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1163 630 176 0 0 chr17 75831080 75831199 -19441452 + (CA)n Simple_repeat Simple_repeat 2 120 0 5 1163 243 0 0 0 chr17 75831199 75831226 -19441425 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 1163 476 211 13 0 chr17 75833338 75833414 -19439237 - ID4_ SINE ID -2 81 5 5 1163 348 24 0 0 chr17 75833470 75833511 -19439140 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1163 691 291 42 16 chr17 75833641 75833833 -19438818 + B3A SINE B2 2 198 0 5 1163 281 102 41 0 chr17 75834076 75834125 -19438526 + (TTTC)n Simple_repeat Simple_repeat 2 52 0 5 1163 483 292 22 87 chr17 75834183 75834198 -19438453 - B3A SINE B2 -26 172 158 5 1163 342 0 0 0 chr17 75834198 75834236 -19438415 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1163 483 292 22 87 chr17 75834236 75834404 -19438247 - B3A SINE B2 -41 157 2 5 1163 400 289 29 0 chr17 75834433 75834537 -19438114 + PB1D10 SINE Alu 1 107 -10 5 1163 825 40 0 0 chr17 75834544 75834645 -19438006 + (GGAAA)n Simple_repeat Simple_repeat 5 105 0 5 1163 340 223 10 10 chr17 75834949 75835053 -19437598 + (CA)n Simple_repeat Simple_repeat 2 105 0 5 1163 243 0 0 0 chr17 75838190 75838217 -19434434 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 5 1163 248 257 11 49 chr17 75838980 75839068 -19433583 + ID4 SINE ID 8 90 -62 5 1163 26 30 0 0 chr17 75839069 75839102 -19433549 + AT_rich Low_complexity Low_complexity 1 33 0 5 1163 830 227 36 63 chr17 75839273 75839494 -19433157 - B3 SINE B2 -1 215 1 5 1163 229 222 0 18 chr17 75839701 75839756 -19432895 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 5 1163 396 0 0 0 chr17 75839772 75839816 -19432835 + (GA)n Simple_repeat Simple_repeat 1 44 0 5 1163 369 0 0 0 chr17 75840172 75840213 -19432438 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1163 649 270 59 38 chr17 75841128 75841417 -19431234 - MER33 DNA MER1_type -15 309 15 5 1163 664 330 27 16 chr17 75841643 75841924 -19430727 + B4 SINE B4 1 287 -5 5 1163 555 16 0 0 chr17 75841925 75841989 -19430662 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 1163 1180 33 18 29 chr17 75842201 75842481 -19430170 + (CA)n Simple_repeat Simple_repeat 1 276 0 5 1163 960 126 0 0 chr17 75844499 75844650 -19428001 + (TG)n Simple_repeat Simple_repeat 1 151 0 5 1163 499 277 80 79 chr17 75844650 75844939 -19427712 - B4A SINE B4 -16 276 2 5 1163 865 211 14 0 chr17 75845430 75845577 -19427074 - B1_Mur2 SINE Alu 0 149 1 5 1163 504 290 23 8 chr17 75845608 75845740 -19426911 - B1F SINE Alu -14 135 2 5 1163 857 276 161 43 chr17 75845764 75846099 -19426552 - L1M2 LINE L1 -3317 3525 3135 5 1163 411 21 0 0 chr17 75846099 75846147 -19426504 + (TTCC)n Simple_repeat Simple_repeat 4 51 0 5 1163 857 276 161 43 chr17 75846147 75846167 -19426484 - L1M2 LINE L1 -3708 3134 3115 5 1163 1200 53 29 0 chr17 75846167 75846338 -19426313 + (TTTCC)n Simple_repeat Simple_repeat 2 177 0 5 1163 857 275 125 29 chr17 75846338 75846638 -19426013 - L1M2 LINE L1 -3728 3114 2793 5 1163 832 289 115 0 chr17 75846693 75846953 -19425698 - B4A SINE B4 0 292 3 5 1163 391 348 42 30 chr17 75847324 75847561 -19425090 + Tigger5 DNA MER2_type 3 242 -2164 5 1163 320 297 0 26 chr17 75847562 75847676 -19424975 + Tigger5 DNA MER2_type 2296 2406 0 5 1163 812 191 146 21 chr17 75847735 75847927 -19424724 - B3 SINE B2 0 216 1 5 1163 735 277 88 41 chr17 75847931 75848397 -19424254 - L1M2 LINE L1 -4178 2671 2184 5 1163 236 275 24 59 chr17 75848503 75848588 -19424063 - MLT1H1 LTR MaLR -385 170 89 5 1163 369 0 0 0 chr17 75848816 75848857 -19423794 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 5 1163 407 68 17 0 chr17 75849089 75849148 -19423503 + (TC)n Simple_repeat Simple_repeat 1 60 0 5 1163 810 197 21 0 chr17 75849871 75850013 -19422638 + B1_Mus2 SINE Alu 3 147 0 5 1163 377 242 90 19 chr17 75850026 75850182 -19422469 - Lx9 LINE L1 -20 7624 7458 5 1163 22 70 0 0 chr17 75850187 75850230 -19422421 + AT_rich Low_complexity Low_complexity 1 43 0 5 1163 1444 236 187 43 chr17 75850240 75850304 -19422347 - MT2A LTR ERVL -1 532 471 5 1163 228 67 0 0 chr17 75850304 75850334 -19422317 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 1163 1444 236 187 43 chr17 75850334 75850734 -19421917 - MT2A LTR ERVL -63 470 1 5 1163 483 18 0 0 chr17 75850741 75850797 -19421854 + (TA)n Simple_repeat Simple_repeat 1 56 0 5 1163 449 211 0 60 chr17 75850896 75851012 -19421639 - Lx9 LINE L1 -288 7356 7248 5 1163 2164 152 52 8 chr17 75851020 75851404 -19421247 + Lx9 LINE L1 6799 7199 -445 5 1163 383 317 71 31 chr17 75852706 75852833 -19419818 + B1F1 SINE Alu 11 142 -7 5 1163 642 135 0 0 chr17 75852960 75853064 -19419587 + (TTC)n Simple_repeat Simple_repeat 3 106 0 5 1163 814 254 91 33 chr17 75853092 75853493 -19419158 - RLTR28B LTR ERVL -14 510 1 5 1163 533 256 14 42 chr17 75853943 75854086 -19418565 + RSINE1 SINE B4 3 141 -24 5 1163 581 246 44 7 chr17 75854312 75854447 -19418204 - B1F SINE Alu 0 149 10 5 1163 188 100 25 0 chr17 75854781 75854821 -19417830 + (CAAAAA)n Simple_repeat Simple_repeat 5 45 0 5 1163 225 0 0 0 chr17 75855448 75855473 -19417178 + (TTG)n Simple_repeat Simple_repeat 2 26 0 5 1163 627 207 0 18 chr17 75856110 75856223 -19416428 + PB1D10 SINE Alu 1 111 -6 5 1163 266 284 12 24 chr17 75856514 75856597 -19416054 - MER67A LTR ERV1 -15 528 447 5 1163 962 148 150 20 chr17 75857383 75857583 -19415068 - URR1A DNA MER1_type 0 226 1 5 1163 21 36 0 0 chr17 75857630 75857658 -19414993 + AT_rich Low_complexity Low_complexity 1 28 0 5 1163 239 348 46 107 chr17 75857886 75858089 -19414562 + MamRep1161 DNA TcMar 8 197 -760 5 1163 513 0 0 0 chr17 75858089 75858146 -19414505 + (TTTTG)n Simple_repeat Simple_repeat 1 57 0 5 1163 874 165 15 0 chr17 75858146 75858279 -19414372 - B1_Mus1 SINE Alu -13 135 1 5 1163 239 348 46 107 chr17 75858279 75858335 -19414316 + MamRep1161 DNA TcMar 198 251 -706 5 1163 26 50 0 0 chr17 75858548 75858588 -19414063 + AT_rich Low_complexity Low_complexity 1 40 0 5 1163 2429 232 105 34 chr17 75859102 75859875 -19412776 + RMER13A LTR ERVK 1 860 0 5 1163 540 147 0 0 chr17 75859877 75859952 -19412699 - tRNA-Lys-AAG tRNA tRNA 0 76 2 5 1163 705 194 300 0 chr17 75860621 75860791 -19411860 - ID_B1 SINE B4 -3 221 1 5 1163 191 60 59 20 chr17 75861021 75861072 -19411579 + (TTTA)n Simple_repeat Simple_repeat 3 55 0 5 1163 231 188 0 0 chr17 75861298 75861346 -19411305 + CT-rich Low_complexity Low_complexity 1 48 0 5 1163 729 158 28 41 chr17 75861352 75861497 -19411154 - B1_Mus1 SINE Alu -5 143 1 5 1163 334 268 133 6 chr17 75861535 75861708 -19410943 - L1M5 LINE L1 -606 5518 5324 5 1163 234 156 0 0 chr17 75861989 75862034 -19410617 + GA-rich Low_complexity Low_complexity 2 46 0 5 1163 375 192 0 0 chr17 75865015 75865093 -19407558 + (TG)n Simple_repeat Simple_repeat 1 78 0 5 1163 31 44 0 0 chr17 75866616 75866661 -19405990 + AT_rich Low_complexity Low_complexity 1 45 0 5 1163 532 370 9 23 chr17 75866979 75867195 -19405456 + Tigger5 DNA MER2_type 30 242 -2164 5 1163 321 309 27 18 chr17 75867191 75867303 -19405348 + Tigger5 DNA MER2_type 2291 2403 -3 5 1163 537 58 0 0 chr17 75867736 75867805 -19404846 + (TTTA)n Simple_repeat Simple_repeat 1 69 0 5 1163 246 62 0 0 chr17 75868856 75868888 -19403763 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 5 1163 1279 41 0 7 chr17 75868905 75869052 -19403599 - B1_Mm SINE Alu -1 146 1 5 1163 431 280 169 36 chr17 75869054 75869273 -19403378 - MER2 DNA MER2_type -89 256 9 5 1163 294 262 48 20 chr17 75869742 75869868 -19402783 - MIRb SINE MIR -77 191 60 5 1163 24 77 0 0 chr17 75870259 75870311 -19402340 + AT_rich Low_complexity Low_complexity 1 52 0 5 1163 21 36 0 0 chr17 75870649 75870677 -19401974 + AT_rich Low_complexity Low_complexity 1 28 0 5 1163 234 62 0 0 chr17 75872892 75872924 -19399727 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1163 230 275 86 12 chr17 75873464 75873545 -19399106 - L2c LINE L2 -179 3208 3122 5 1163 301 280 0 39 chr17 75873812 75873890 -19398761 + PB1D10 SINE Alu 43 117 0 5 1163 279 0 0 0 chr17 75873993 75874024 -19398627 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 5 1163 695 224 8 0 chr17 75874085 75874210 -19398441 + RSINE1 SINE B4 16 141 -24 5 1163 579 40 0 0 chr17 75874212 75874286 -19398365 + (CA)n Simple_repeat Simple_repeat 1 74 0 5 1163 724 190 0 27 chr17 75874338 75874522 -19398129 + (TA)n Simple_repeat Simple_repeat 2 180 0 5 1163 805 200 0 41 chr17 75874544 75874690 -19397961 - B1_Mur2 SINE Alu -6 143 4 5 1163 24 0 0 0 chr17 75874706 75874730 -19397921 + AT_rich Low_complexity Low_complexity 1 24 0 5 1163 276 30 0 0 chr17 75875855 75875888 -19396763 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1163 403 260 10 29 chr17 75875958 75876061 -19396590 - RSINE1 SINE B4 -63 102 2 5 1163 912 269 115 11 chr17 75877494 75877611 -19395040 - B4A SINE B4 -3 289 162 5 1163 3601 28 5 0 chr17 75877611 75878005 -19394646 - MTA_Mm LTR MaLR 0 396 1 5 1163 912 269 115 11 chr17 75878005 75878147 -19394504 - B4A SINE B4 -131 161 3 5 1163 504 0 0 0 chr17 75879684 75879740 -19392911 + (TC)n Simple_repeat Simple_repeat 2 57 0 5 1163 455 296 14 40 chr17 75879889 75880037 -19392614 - B4A SINE B4 -147 145 2 5 1163 477 97 0 0 chr17 75880243 75880315 -19392336 + (CA)n Simple_repeat Simple_repeat 2 73 0 5 1163 461 202 0 0 chr17 75880316 75880395 -19392256 - PB1D9 SINE Alu -32 88 10 5 1163 349 309 49 42 chr17 75880322 75880464 -19392187 - B4 SINE B4 -125 167 25 5 1163 2257 102 57 99 chr17 75881233 75881636 -19391015 + ORR1B1 LTR MaLR 1 386 -8 6 1163 1141 126 132 25 chr17 75882191 75882395 -19390256 + URR1A DNA MER1_type 1 226 0 6 1163 186 43 0 0 chr17 75882871 75882894 -19389757 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 6 1163 1012 244 35 5 chr17 75883411 75883613 -19389038 - B3 SINE B2 -8 208 1 6 1163 249 266 143 32 chr17 75884362 75884463 -19388188 - PB1 SINE Alu -8 119 18 6 1163 365 278 74 0 chr17 75884508 75884616 -19388035 + B1F SINE Alu 33 148 -1 6 1163 231 159 31 31 chr17 75885150 75885215 -19387436 + (TA)n Simple_repeat Simple_repeat 2 66 0 6 1163 27 0 0 0 chr17 75887758 75887785 -19384866 + AT_rich Low_complexity Low_complexity 1 27 0 6 1163 431 320 46 26 chr17 75887805 75887956 -19384695 - RSINE1 SINE B4 -5 160 7 6 1163 1821 168 48 3 chr17 75890273 75890631 -19382020 + ORR1D1 LTR MaLR 1 374 0 6 1164 479 258 81 24 chr17 75891925 75892048 -19380603 + RSINE1 SINE B4 4 133 -32 6 1164 369 264 63 19 chr17 75892066 75892224 -19380427 + MER53 DNA hAT 20 184 -9 6 1164 329 260 75 19 chr17 75892325 75892431 -19380220 + B3A SINE B2 1 112 -86 6 1164 1805 32 0 22 chr17 75892720 75892945 -19379706 - L1Md_F3 LINE L1 -11 6573 6354 6 1164 4279 48 2 0 chr17 75892945 75893461 -19379190 + L1Md_F3 LINE L1 5834 6350 -234 6 1164 1141 98 38 0 chr17 75893994 75894177 -19378474 - URR1A DNA MER1_type 0 226 37 6 1164 234 0 0 0 chr17 75896244 75896270 -19376381 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1164 198 252 183 8 chr17 75896569 75896689 -19375962 + MIR SINE MIR 107 247 -15 6 1164 231 347 33 25 chr17 75896756 75896877 -19375774 + MER5A1 DNA MER1_type 44 165 -1 6 1164 436 300 0 10 chr17 75897060 75897161 -19375490 - B1F SINE Alu -31 118 19 6 1164 536 106 0 12 chr17 75898612 75898637 -19374014 + (TC)n Simple_repeat Simple_repeat 1 25 0 6 1164 1208 94 0 11 chr17 75898637 75898819 -19373832 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 1164 536 106 0 12 chr17 75898819 75898879 -19373772 + (TC)n Simple_repeat Simple_repeat 1 60 0 6 1164 590 252 14 22 chr17 75900325 75900463 -19372188 + RSINE1 SINE B4 4 140 -25 6 1164 405 58 0 0 chr17 75900478 75900530 -19372121 + (TAAA)n Simple_repeat Simple_repeat 3 54 0 6 1164 693 258 72 26 chr17 75901744 75901939 -19370712 + B3 SINE B2 2 205 -11 6 1164 456 35 0 0 chr17 75901940 75901998 -19370653 + (CA)n Simple_repeat Simple_repeat 2 59 0 6 1164 450 0 0 0 chr17 75903131 75903181 -19369470 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 6 1164 1218 43 0 0 chr17 75903183 75903324 -19369327 - B1_Mus2 SINE Alu -6 141 1 6 1164 260 233 0 14 chr17 75903383 75903457 -19369194 + GA-rich Low_complexity Low_complexity 6 78 0 6 1164 249 343 35 35 chr17 75903462 75903604 -19369047 - RSINE1 SINE B4 -19 146 5 6 1164 202 154 18 55 chr17 75903613 75903663 -19368988 + T-rich Low_complexity Low_complexity 7 54 0 6 1164 419 243 36 9 chr17 75903663 75903775 -19368876 - PB1D10 SINE Alu -2 115 1 6 1164 270 0 0 0 chr17 75904052 75904082 -19368569 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 6 1164 198 0 0 0 chr17 75904921 75904943 -19367708 + (CAAA)n Simple_repeat Simple_repeat 1 22 0 6 1164 206 183 42 14 chr17 75906896 75906968 -19365683 + GA-rich Low_complexity Low_complexity 4 77 0 6 1164 201 390 22 39 chr17 75908285 75908464 -19364187 - MIRb SINE MIR -33 235 60 6 1164 225 299 37 18 chr17 75908574 75908683 -19363968 + L2c LINE L2 3239 3349 -38 6 1164 249 33 0 0 chr17 75909422 75909452 -19363199 + (GA)n Simple_repeat Simple_repeat 1 30 0 6 1164 276 30 0 0 chr17 75909551 75909584 -19363067 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 6 1164 844 204 88 5 chr17 75909590 75909782 -19362869 + B3 SINE B2 9 216 0 6 1164 308 244 12 47 chr17 75909870 75909956 -19362695 + B4A SINE B4 209 291 -1 6 1164 404 281 42 0 chr17 75910559 75910655 -19361996 - PB1D10 SINE Alu -8 109 10 6 1164 482 0 17 0 chr17 75910680 75910738 -19361913 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1164 377 268 194 8 chr17 75911087 75911211 -19361440 + B1F2 SINE Alu 1 147 -2 6 1164 1331 105 16 0 chr17 75911513 75911703 -19360948 - B2_Mm2 SINE B2 -1 194 2 6 1164 280 194 0 0 chr17 75912214 75912276 -19360375 + PB1D10 SINE Alu 5 66 -51 6 1164 480 260 57 23 chr17 75912726 75912903 -19359748 + B3 SINE B2 4 186 -30 6 1164 25 31 0 0 chr17 75912945 75912977 -19359674 + AT_rich Low_complexity Low_complexity 1 32 0 6 1164 1121 56 21 0 chr17 75913590 75913732 -19358919 + B1_Mus2 SINE Alu 1 145 -2 6 1164 192 111 0 0 chr17 75913761 75913797 -19358854 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 6 1164 180 0 0 0 chr17 75916063 75916083 -19356568 + (GA)n Simple_repeat Simple_repeat 2 21 0 6 1164 856 178 214 11 chr17 75916564 75916751 -19355900 + URR1B DNA MER1_type 1 225 0 6 1164 1468 163 169 17 chr17 75916827 75917033 -19355618 - RMER17C LTR ERVK 0 410 203 6 1164 1071 63 17 23 chr17 75917033 75917210 -19355441 + (GGAGA)n Simple_repeat Simple_repeat 2 177 0 6 1164 1468 163 169 17 chr17 75917210 75917358 -19355293 - RMER17C LTR ERVK -208 202 4 6 1164 522 0 0 0 chr17 75917866 75917924 -19354727 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 1164 507 33 0 0 chr17 75917924 75917984 -19354667 + (CA)n Simple_repeat Simple_repeat 1 61 0 6 1164 224 285 121 42 chr17 75918270 75918435 -19354216 + MIRc SINE MIR 24 201 -67 6 1164 326 193 76 92 chr17 75918822 75918953 -19353698 - MIRc SINE MIR -117 151 23 6 1164 389 255 48 19 chr17 75919230 75919334 -19353317 - PB1D7 SINE Alu -11 109 3 6 1164 1195 131 48 52 chr17 75919364 75919613 -19353038 - Lx7 LINE L1 -1 7695 7448 6 1164 513 145 0 91 chr17 75919613 75919734 -19352917 - RMER17C LTR ERVK 0 410 301 6 1164 284 118 39 0 chr17 75919756 75919807 -19352844 - RMER17C LTR ERVK -357 53 1 6 1164 525 235 0 103 chr17 75919807 75919992 -19352659 - Lx7 LINE L1 -1735 5961 5796 6 1164 1095 79 0 7 chr17 75920161 75920301 -19352350 + B1_Mus2 SINE Alu 1 139 -8 6 1164 369 0 0 0 chr17 75920301 75920342 -19352309 + (CAAT)n Simple_repeat Simple_repeat 2 42 0 6 1164 627 152 8 118 chr17 75920342 75920590 -19352061 - RMER17C LTR ERVK -112 298 1 6 1164 1541 185 9 71 chr17 75921388 75921584 -19351067 - RMER17C LTR ERVK 0 410 230 6 1164 825 11 0 0 chr17 75921584 75921678 -19350973 + (GA)n Simple_repeat Simple_repeat 1 94 0 6 1164 1541 185 9 71 chr17 75921678 75921918 -19350733 - RMER17C LTR ERVK -181 229 1 6 1164 485 259 0 26 chr17 75922580 75922695 -19349956 + PB1D10 SINE Alu 1 112 -5 6 1164 387 286 69 118 chr17 75925565 75925870 -19346781 - B4A SINE B4 -2 290 1 6 1164 186 43 0 0 chr17 75925886 75925909 -19346742 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 6 1164 330 231 56 28 chr17 75925909 75926016 -19346635 - PB1 SINE Alu -9 118 9 6 1164 242 29 29 0 chr17 75926847 75926882 -19345769 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 6 1164 632 135 0 45 chr17 75927141 75927273 -19345378 + RMER17B LTR ERVK 335 460 -498 6 1164 24 0 0 0 chr17 75927340 75927364 -19345287 + AT_rich Low_complexity Low_complexity 1 24 0 6 1164 364 280 11 0 chr17 75927417 75927510 -19345141 + PB1D10 SINE Alu 19 112 -5 6 1164 1302 80 42 31 chr17 75927516 75927709 -19344942 + B2_Mm2 SINE B2 1 195 0 6 1164 985 177 64 25 chr17 75928693 75928896 -19343755 - B3 SINE B2 -5 211 1 6 1164 666 214 14 35 chr17 75929522 75929667 -19342984 + B1_Mus1 SINE Alu 6 147 -1 6 1164 1167 56 0 0 chr17 75929780 75929924 -19342727 + B1_Mm SINE Alu 1 144 -3 6 1164 22 56 0 0 chr17 75929924 75929960 -19342691 + AT_rich Low_complexity Low_complexity 1 36 0 6 1164 220 308 31 0 chr17 75931684 75931749 -19340902 - ID4 SINE ID -9 74 8 6 1164 180 0 0 0 chr17 75931927 75931947 -19340704 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 6 1164 1131 65 7 0 chr17 75932335 75932489 -19340162 + B2_Mm1t SINE B2 6 160 -33 6 1164 378 0 0 0 chr17 75932489 75932531 -19340120 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 6 1164 1594 32 21 0 chr17 75932541 75932729 -19339922 - B2_Mm1a SINE B2 0 193 2 6 1164 22 56 0 0 chr17 75932736 75932772 -19339879 + AT_rich Low_complexity Low_complexity 1 36 0 6 1164 691 12 0 0 chr17 75933555 75933640 -19339011 + L1Md_T LINE L1 6498 6582 0 6 1164 201 74 0 0 chr17 75933646 75933673 -19338978 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1164 303 239 42 0 chr17 75934642 75934713 -19337938 + ID_B1 SINE B4 94 167 -57 6 1164 228 270 89 11 chr17 75935141 75935231 -19337420 + B1F1 SINE Alu 10 106 -43 6 1164 283 277 31 78 chr17 75935819 75935948 -19336703 + RSINE1 SINE B4 2 124 -41 6 1164 389 36 0 18 chr17 75935966 75936022 -19336629 + (CA)n Simple_repeat Simple_repeat 1 55 0 6 1164 224 296 0 0 chr17 75937644 75937715 -19334936 + C-rich Low_complexity Low_complexity 2 72 0 6 1164 382 185 0 0 chr17 75939325 75939390 -19333261 + B1F SINE Alu 24 88 -61 6 1164 201 254 24 0 chr17 75939739 75939804 -19332847 + L2a LINE L2 3308 3426 0 6 1164 255 61 0 0 chr17 75939970 75940003 -19332648 + (TA)n Simple_repeat Simple_repeat 1 33 0 6 1164 365 287 95 7 chr17 75941335 75941472 -19331179 - RSINE1 SINE B4 -14 151 3 6 1164 312 278 51 25 chr17 75941944 75942062 -19330589 + MER58B DNA MER1_type 221 341 0 6 1164 205 89 22 22 chr17 75943229 75943275 -19329376 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 6 1164 239 0 32 0 chr17 75943533 75943564 -19329087 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6 1164 278 278 61 74 chr17 75944398 75944561 -19328090 - RSINE1 SINE B4 -4 161 1 7 1164 21 0 0 0 chr17 75945026 75945047 -19327604 + AT_rich Low_complexity Low_complexity 1 21 0 7 1164 844 165 271 0 chr17 75945053 75945223 -19327428 + B3 SINE B2 1 216 0 7 1164 250 355 45 0 chr17 75945726 75945836 -19326815 + MIRb SINE MIR 86 200 -68 7 1164 316 313 0 10 chr17 75946528 75946628 -19326023 + ID_B1 SINE B4 77 175 -49 7 1164 476 240 10 0 chr17 75946545 75946649 -19326002 + PB1D10 SINE Alu 12 116 -1 7 1164 245 250 148 37 chr17 75947279 75947387 -19325264 + PB1D9 SINE Alu 1 120 0 7 1164 616 279 68 14 chr17 75947441 75947648 -19325003 + ID_B1 SINE B4 2 219 -5 7 1164 243 0 0 0 chr17 75947660 75947687 -19324964 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1164 229 135 0 0 chr17 75947895 75947932 -19324719 - ID_B1 SINE B4 -1 223 187 7 1164 285 336 102 9 chr17 75947957 75948065 -19324586 + PB1 SINE Alu 1 118 -9 7 1164 225 0 0 0 chr17 75948067 75948092 -19324559 + (CAAG)n Simple_repeat Simple_repeat 2 26 0 7 1164 226 280 234 23 chr17 75948120 75948248 -19324403 + RSINE1 SINE B4 11 165 0 7 1164 620 221 66 7 chr17 75948255 75948392 -19324259 - B1_Mur2 SINE Alu -2 147 3 7 1164 742 259 0 12 chr17 75948648 75948820 -19323831 + B3 SINE B2 1 170 -46 7 1164 360 64 0 0 chr17 75948823 75948870 -19323781 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 1164 592 128 10 0 chr17 75949030 75949132 -19323519 + B1_Mus2 SINE Alu 40 142 -5 7 1164 1228 35 7 0 chr17 75949597 75949741 -19322910 + B1_Mus2 SINE Alu 2 146 -1 7 1164 207 0 0 0 chr17 75949741 75949764 -19322887 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 1164 273 217 0 0 chr17 75950118 75950187 -19322464 + B1_Mur3 SINE Alu 2 70 -79 7 1164 369 0 0 0 chr17 75950253 75950294 -19322357 + (T)n Simple_repeat Simple_repeat 1 41 0 7 1164 830 188 21 0 chr17 75951923 75952067 -19320584 - B1_Mur1 SINE Alu 0 149 3 7 1164 810 273 91 26 chr17 75952463 75952847 -19319804 + RMER5 LTR ERV1 78 486 -48 7 1164 1683 211 82 116 chr17 75954048 75954319 -19318332 - RMER16 LTR ERVK 0 533 268 7 1164 1683 112 26 93 chr17 75954319 75954664 -19317987 - RLTRETN_Mm LTR ERVK 0 322 1 7 1164 1154 57 7 0 chr17 75954664 75954804 -19317847 - B1_Mm SINE Alu -6 141 1 7 1164 1683 211 82 116 chr17 75954804 75954890 -19317761 - RMER16 LTR ERVK -266 267 195 7 1164 2458 105 158 2 chr17 75954890 75955301 -19317350 - IAPLTR2_Mm LTR ERVK 0 475 1 7 1164 1683 211 82 116 chr17 75955301 75955493 -19317158 - RMER16 LTR ERVK -339 194 3 7 1164 513 58 0 0 chr17 75955512 75955581 -19317070 + (CA)n Simple_repeat Simple_repeat 2 70 0 7 1164 214 268 27 40 chr17 75955713 75955787 -19316864 + L2c LINE L2 3052 3124 -263 7 1164 25 0 0 0 chr17 75956875 75956900 -19315751 + AT_rich Low_complexity Low_complexity 1 25 0 7 1164 1147 82 0 0 chr17 75956992 75957139 -19315512 + B1_Mm SINE Alu 1 147 0 7 1164 213 182 0 0 chr17 75957141 75957196 -19315455 + A-rich Low_complexity Low_complexity 1 55 0 7 1164 383 316 32 65 chr17 75957381 75957567 -19315084 - MER5A DNA MER1_type -2 187 8 7 1164 2927 101 30 49 chr17 75957749 75958240 -19314411 + RLTR45 LTR ERVK 1 482 0 7 1164 615 273 50 0 chr17 75958293 75958432 -19314219 + RSINE1 SINE B4 3 148 -17 7 1164 2715 146 30 4 chr17 75958432 75958907 -19313744 + RMER15 LTR ERVL 1 487 -88 7 1164 2486 51 3 9 chr17 75959268 75959602 -19313049 - IAPEY_LTR LTR ERVK 0 385 54 7 1164 1082 226 80 8 chr17 75959600 75959850 -19312801 - MTE2b LTR MaLR -46 333 66 7 1164 2403 184 112 15 chr17 75959867 75960452 -19312199 + RMER13A LTR ERVK 13 650 -258 7 1164 3010 162 68 21 chr17 75960442 75961099 -19311552 + RMER17B LTR ERVK 267 954 -4 7 1164 1485 208 92 62 chr17 75961388 75961843 -19310808 + RMER19C LTR ERVK 143 611 0 7 1164 351 44 0 0 chr17 75961977 75962022 -19310629 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 1164 459 293 31 82 chr17 75962096 75962308 -19310343 - B4A SINE B4 -9 215 3 7 1164 1067 250 71 68 chr17 75962377 75962772 -19309879 + RMER13A LTR ERVK 1 396 -464 7 1164 311 337 110 88 chr17 75962834 75963107 -19309544 + RMER13A LTR ERVK 545 823 -37 7 1164 236 321 127 27 chr17 75963322 75963543 -19309108 + MLT1J-int LTR MaLR 99 341 -1046 7 1164 212 326 130 20 chr17 75963936 75964036 -19308615 + PB1 SINE Alu 1 111 -16 7 1164 1474 63 0 36 chr17 75964215 75964411 -19308240 + B2_Mm1t SINE B2 2 190 -3 7 1164 226 0 29 29 chr17 75964691 75964726 -19307925 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 1164 571 261 67 46 chr17 75965015 75965260 -19307391 + MER34A LTR ERV1 30 272 -270 7 1164 208 53 53 0 chr17 75965275 75965313 -19307338 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 7 1164 1121 75 7 0 chr17 75965314 75965460 -19307191 - B1_Mus2 SINE Alu 0 147 1 7 1164 1120 62 7 7 chr17 75965584 75965729 -19306922 - B1_Mm SINE Alu 0 147 3 7 1164 3280 18 54 3 chr17 75965794 75966185 -19306466 + IAPLTR2a LTR ERVK 1 411 0 7 1164 275 230 26 39 chr17 75966192 75966269 -19306382 + MTD LTR MaLR 3 78 -341 7 1164 349 254 17 42 chr17 75966252 75966371 -19306280 - MTD LTR MaLR -293 126 11 7 1164 1355 269 22 11 chr17 75966373 75966738 -19305913 - ORR1D2 LTR MaLR 0 370 2 7 1164 287 276 20 0 chr17 75966744 75966842 -19305809 + MER34A LTR ERV1 461 560 -11 7 1164 733 169 6 13 chr17 75967151 75967307 -19305344 + CT-rich Low_complexity Low_complexity 3 157 0 7 1164 486 276 179 6 chr17 75967310 75967478 -19305173 - RMER15 LTR ERVL -104 471 275 7 1164 281 215 32 199 chr17 75967481 75967667 -19304984 - RMER15 LTR ERVL -420 155 1 7 1164 2500 162 67 0 chr17 75967687 75968137 -19304514 + RLTR17 LTR ERVK 213 692 0 7 1164 1476 242 77 31 chr17 75968137 75968210 -19304441 + RMER3D-int LTR ERVK 1 71 -2771 7 1164 195 42 0 0 chr17 75968210 75968234 -19304417 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1164 7900 180 70 55 chr17 75968234 75970586 -19302065 + RMER3D-int LTR ERVK 72 2842 0 7 1164 2294 126 5 8 chr17 75970586 75970953 -19301698 + RLTR17 LTR ERVK 1 366 -326 7 1164 942 26 0 0 chr17 75970953 75971066 -19301585 + (GAAA)n Simple_repeat Simple_repeat 3 115 0 7 1164 285 29 0 0 chr17 75971176 75971210 -19301441 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 1164 180 0 0 0 chr17 75971348 75971368 -19301283 + (CAA)n Simple_repeat Simple_repeat 2 21 0 7 1164 2283 188 21 35 chr17 75972421 75972905 -19299746 - RLTR16 LTR ERVK -12 493 17 7 1164 1478 74 241 0 chr17 75973129 75973386 -19299265 + ORR1A2 LTR MaLR 1 319 -8 7 1164 218 239 14 0 chr17 75974094 75974165 -19298486 + CT-rich Low_complexity Low_complexity 1 72 0 7 1164 429 325 11 51 chr17 75974263 75974438 -19298213 - B3A SINE B2 -4 194 27 7 1164 1164 41 7 7 chr17 75974444 75974590 -19298061 - B1_Mm SINE Alu 0 147 2 7 1164 250 132 38 0 chr17 75974639 75974692 -19297959 + MTEa LTR MaLR 324 378 -1 7 1164 597 160 0 0 chr17 75975871 75975977 -19296674 + CT-rich Low_complexity Low_complexity 1 106 0 7 1164 1056 141 0 0 chr17 75975977 75976154 -19296497 + (TCC)n Simple_repeat Simple_repeat 3 179 0 7 1164 497 239 9 0 chr17 75976170 75976283 -19296368 - PB1D10 SINE Alu -1 116 3 7 1164 293 229 146 0 chr17 75976444 75976540 -19296111 + MER103 DNA DNA 10 119 -47 7 1164 1766 139 24 97 chr17 75976812 75977017 -19295634 - MTB_Mm LTR MaLR -8 413 196 7 1164 4056 30 26 10 chr17 75977017 75977518 -19295133 - L1Md_F3 LINE L1 0 6584 6076 7 1164 1766 129 0 102 chr17 75977518 75977716 -19294935 - MTB_Mm LTR MaLR -212 195 4 7 1164 747 253 93 108 chr17 75977828 75977900 -19294751 - B4A SINE B4 0 292 225 7 1164 198 0 0 0 chr17 75977900 75977922 -19294729 + (TA)n Simple_repeat Simple_repeat 1 22 0 7 1164 747 253 93 108 chr17 75977922 75978128 -19294523 - B4A SINE B4 -68 224 18 7 1164 236 307 148 0 chr17 75978237 75978338 -19294313 - PB1D10 SINE Alu 0 117 2 7 1164 877 134 19 0 chr17 75978343 75978500 -19294151 + CT-rich Low_complexity Low_complexity 1 160 0 7 1164 330 78 0 99 chr17 75978505 75978576 -19294075 - B2_Mm1t SINE B2 -1 192 129 7 1164 931 143 8 3 chr17 75978590 75978755 -19293896 - B2_Mm2 SINE B2 -44 172 1 7 1164 2562 168 10 2 chr17 75979056 75979474 -19293177 + MTC LTR MaLR 1 421 0 7 1164 1892 208 95 35 chr17 75979478 75979992 -19292659 + MTC-int LTR MaLR 14 558 -700 7 1164 2987 165 66 40 chr17 75980454 75981001 -19291650 + MTC-int LTR MaLR 558 1127 -131 7 1164 3701 129 86 8 chr17 75981001 75981641 -19291010 - RMER6C LTR ERVK 0 690 1 7 1164 2987 165 66 40 chr17 75981641 75981776 -19290875 + MTC-int LTR MaLR 1128 1258 0 7 1164 610 93 0 0 chr17 75981776 75981862 -19290789 + MTC LTR MaLR 1 86 -335 7 1164 1353 210 111 47 chr17 75981870 75982414 -19290237 - RLTR18B LTR ERVK -89 527 1 7 1164 2059 156 3 22 chr17 75982414 75982758 -19289893 + MTC LTR MaLR 85 421 0 7 1164 332 265 19 56 chr17 75982796 75982904 -19289747 - L1MC1 LINE L1 -14 6319 6216 7 1164 882 225 29 59 chr17 75982903 75983158 -19289493 - L1MC1 LINE L1 -374 5959 5713 7 1164 2056 127 157 7 chr17 75983158 75983571 -19289080 - IAPLTR2_Mm LTR ERVK 0 475 1 7 1164 882 225 29 59 chr17 75983571 75983622 -19289029 - L1MC1 LINE L1 -621 5712 5662 7 1164 207 0 0 0 chr17 75983629 75983652 -19288999 + (T)n Simple_repeat Simple_repeat 1 23 0 7 1164 763 288 12 24 chr17 75983679 75983925 -19288726 + MTD LTR MaLR 1 243 -176 7 1164 389 202 0 71 chr17 75983995 75984080 -19288571 + MTD LTR MaLR 269 347 -72 7 1164 188 100 0 24 chr17 75984080 75984121 -19288530 + (CAAAAA)n Simple_repeat Simple_repeat 6 45 0 7 1164 295 181 2 101 chr17 75984121 75984203 -19288448 + MTD LTR MaLR 287 379 0 7 1164 342 0 0 0 chr17 75984210 75984248 -19288403 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1164 252 307 78 26 chr17 75984249 75984326 -19288325 - PB1D10 SINE Alu -24 93 13 7 1164 409 235 101 41 chr17 75984742 75984911 -19287740 + RLTR41 LTR ERV1 268 446 0 7 1164 642 227 26 7 chr17 75984922 75985077 -19287574 - L1MC1 LINE L1 -669 5675 5518 7 1164 333 0 0 0 chr17 75985122 75985159 -19287492 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 1164 684 241 94 15 chr17 75986230 75986432 -19286219 + ID_B1 SINE B4 2 219 -5 7 1164 682 219 60 74 chr17 75986696 75986913 -19285738 + RMER10A LTR ERVL 1 214 -228 7 1164 316 258 0 40 chr17 75986914 75987015 -19285636 + RMER10A LTR ERVL 346 442 0 7 1164 277 327 9 11 chr17 75987997 75988115 -19284536 - L1M4 LINE L1 -576 5608 5493 7 1164 746 150 117 12 chr17 75988579 75988741 -19283910 + ORR1B1 LTR MaLR 47 225 -169 7 1164 324 216 27 0 chr17 75988744 75988818 -19283833 - L1M4b LINE L1 -3765 3569 3494 7 1164 303 295 20 40 chr17 75988820 75988919 -19283732 - PB1D9 SINE Alu -2 118 22 7 1164 436 221 191 40 chr17 75988919 75989224 -19283427 - L1M4b LINE L1 -4074 3260 2883 7 1164 1112 114 6 0 chr17 75989224 75989400 -19283251 + (TTCTC)n Simple_repeat Simple_repeat 2 178 0 8 1164 551 40 0 13 chr17 75989400 75989475 -19283176 + (TTTTC)n Simple_repeat Simple_repeat 2 75 0 8 1164 1134 83 0 0 chr17 75989475 75989619 -19283032 - B1_Mus2 SINE Alu -3 144 1 8 1164 436 206 228 47 chr17 75989619 75989660 -19282991 - L1M4b LINE L1 -4336 2998 2962 7 1164 203 0 0 36 chr17 75989720 75989748 -19282903 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 8 1164 3609 107 19 17 chr17 75989756 75990297 -19282354 - L1_Mus4 LINE L1 -3 6633 6092 8 1164 804 201 138 11 chr17 75990428 75990609 -19282042 - B3 SINE B2 -9 207 4 8 1164 2376 90 19 0 chr17 75990658 75990979 -19281672 - ORR1A2 LTR MaLR 0 327 1 8 1164 22 0 0 0 chr17 75991171 75991193 -19281458 + AT_rich Low_complexity Low_complexity 1 22 0 8 1164 546 29 0 0 chr17 75991368 75991436 -19281215 + (CA)n Simple_repeat Simple_repeat 1 68 0 8 1164 1162 301 50 15 chr17 75991443 75991962 -19280689 - L1MA6 LINE L1 -372 5928 5392 8 1164 1472 188 119 58 chr17 75992043 75992182 -19280469 + MTC LTR MaLR 1 120 -301 8 1164 4401 106 41 11 chr17 75992182 75992843 -19279808 - Lx LINE L1 -1 6653 5973 8 1164 1472 188 119 58 chr17 75992843 75993082 -19279569 + MTC LTR MaLR 121 402 -19 8 1164 450 234 99 23 chr17 75993090 75993261 -19279390 - L1_Rod LINE L1 -620 5227 5044 8 1164 928 142 0 13 chr17 75993380 75993400 -19279251 - B1_Mus1 SINE Alu 0 148 131 8 1164 1068 117 0 0 chr17 75993400 75993563 -19279088 + (TTC)n Simple_repeat Simple_repeat 2 164 0 8 1164 928 142 0 13 chr17 75993563 75993692 -19278959 - B1_Mus1 SINE Alu -18 130 2 8 1164 21 0 0 0 chr17 75993983 75994004 -19278647 + AT_rich Low_complexity Low_complexity 1 21 0 8 1164 381 316 43 26 chr17 75994009 75994126 -19278525 - B1F SINE Alu -30 119 1 8 1164 1071 92 30 0 chr17 75994242 75994406 -19278245 - URR1A DNA MER1_type 0 226 58 8 1164 942 162 173 0 chr17 75994660 75994851 -19277800 + URR1B DNA MER1_type 1 224 -1 8 1164 956 305 50 27 chr17 75995098 75995629 -19277022 - Lx9 LINE L1 -516 5784 5273 8 1164 2241 149 101 10 chr17 75995645 75996031 -19276620 + MTC LTR MaLR 1 421 0 8 1164 1252 290 113 140 chr17 75996164 75997494 -19275157 - L1M4b LINE L1 -6011 1323 29 8 1164 265 307 76 55 chr17 75998416 75998694 -19273957 + MTEa LTR MaLR 43 356 -23 8 1164 204 40 0 0 chr17 75998956 75998981 -19273670 + (T)n Simple_repeat Simple_repeat 1 25 0 8 1164 399 333 62 34 chr17 75999643 75999820 -19272831 + B3A SINE B2 1 182 -16 8 1164 407 254 33 17 chr17 75999865 75999985 -19272666 + MTD LTR MaLR 1 122 -297 8 1164 879 264 54 5 chr17 76000000 76000221 -19272430 + MTD LTR MaLR 181 412 -7 1 1164 612 281 143 8 chr17 76000216 76000453 -19272198 + RMER15 LTR ERVL 289 557 -18 2 1164 222 324 47 73 chr17 76000391 76000541 -19272110 - B1_Mm SINE Alu -1 146 1 3 1164 215 261 0 0 chr17 76000541 76000606 -19272045 + (CATGC)n Simple_repeat Simple_repeat 2 66 0 4 1164 439 243 29 19 chr17 76000606 76000711 -19271940 - B4A SINE B4 -182 110 5 5 1164 444 243 0 0 chr17 76000722 76000825 -19271826 - L1MA5 LINE L1 -2 6298 6196 6 1164 22 56 0 0 chr17 76000853 76000889 -19271762 + AT_rich Low_complexity Low_complexity 1 36 0 7 1164 308 303 48 16 chr17 76001067 76001191 -19271460 - Lx9 LINE L1 -270 7374 7247 8 1164 620 87 11 0 chr17 76001191 76001283 -19271368 + (TTCTC)n Simple_repeat Simple_repeat 2 94 0 9 1164 444 290 48 27 chr17 76001292 76001480 -19271171 - Lx9 LINE L1 -402 7242 7051 8 1164 25 0 0 0 chr17 76001688 76001713 -19270938 + AT_rich Low_complexity Low_complexity 1 25 0 1 1164 517 351 96 33 chr17 76001828 76001956 -19270695 + Tigger10 DNA Tigger 1258 1390 -453 1 1164 4565 146 106 36 chr17 76001956 76002805 -19269846 - RMER13B LTR ERVK 0 908 1 1 1164 517 351 96 33 chr17 76002805 76003071 -19269580 + Tigger10 DNA Tigger 1391 1677 -166 1 1164 224 222 14 0 chr17 76003422 76003494 -19269157 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 1164 962 162 0 6 chr17 76004016 76004196 -19268455 + CT-rich Low_complexity Low_complexity 2 180 0 1 1164 250 300 26 52 chr17 76004200 76004294 -19268357 - B1_Mur2 SINE Alu -1 119 28 1 1164 1252 68 0 0 chr17 76004297 76004444 -19268207 + B1_Mus1 SINE Alu 2 148 0 1 1164 282 116 0 0 chr17 76004444 76004487 -19268164 + (A)n Simple_repeat Simple_repeat 1 43 0 1 1164 857 175 15 0 chr17 76004615 76004752 -19267899 - B1_Mur3 SINE Alu -8 141 3 1 1164 3799 239 32 30 chr17 76004781 76004861 -19267790 - RMER1A Other Other 0 1030 957 1 1164 4950 135 9 79 chr17 76004861 76005724 -19266927 + RLTR13B4 LTR ERVK 1 803 0 2 1164 3799 239 32 30 chr17 76005724 76005870 -19266781 - RMER1A Other Other -74 956 814 1 1164 2166 109 39 60 chr17 76005870 76006203 -19266448 + ORR1A2 LTR MaLR 1 326 -1 2 1164 3799 262 27 58 chr17 76006203 76007258 -19265393 - RMER1A Other Other -217 813 1 1 1164 454 157 0 0 chr17 76007618 76007688 -19264963 + CT-rich Low_complexity Low_complexity 2 71 0 2 1164 1144 46 0 0 chr17 76007688 76007819 -19264832 - B1_Mm SINE Alu -16 131 1 2 1164 425 291 170 19 chr17 76007819 76008137 -19264514 - L1MA6 LINE L1 -121 6179 5814 2 1164 4889 122 27 0 chr17 76008167 76008879 -19263772 - L1VL4 LINE L1 -5382 920 190 2 1164 18930 178 40 54 chr17 76008887 76009167 -19263484 + Lx2B LINE L1 1766 2047 -3830 2 1164 204 40 0 0 chr17 76009167 76009192 -19263459 + (CATA)n Simple_repeat Simple_repeat 1 25 0 2 1164 18930 178 40 54 chr17 76009192 76010646 -19262005 + Lx2B LINE L1 2048 3503 -2374 2 1164 822 69 0 0 chr17 76010646 76010748 -19261903 + B2_Mm2 SINE B2 1 102 -93 2 1164 18930 178 40 54 chr17 76010748 76011861 -19260790 + Lx2B LINE L1 3504 4620 -1257 2 1164 2913 56 15 0 chr17 76011861 76012202 -19260449 + ORR1A1 LTR MaLR 1 346 0 2 1164 18930 194 55 37 chr17 76012202 76014481 -19258170 + Lx2B LINE L1 4621 7000 0 2 1164 340 216 9 97 chr17 76014804 76014917 -19257734 - B3A SINE B2 -9 189 87 3 1164 7836 70 1 0 chr17 76015010 76016119 -19256532 - L1_Mus1 LINE L1 0 6567 5457 3 1164 288 0 0 0 chr17 76016471 76016503 -19256148 + (CCAA)n Simple_repeat Simple_repeat 4 35 0 3 1164 181 57 57 0 chr17 76016507 76016542 -19256109 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 3 1164 936 108 0 0 chr17 76016544 76016674 -19255977 - B1_Mus1 SINE Alu 0 148 19 3 1164 760 262 97 90 chr17 76018235 76018524 -19254127 - B4 SINE B4 -1 291 1 3 1164 421 324 43 89 chr17 76018958 76019285 -19253366 + RSINE1 SINE B4 1 274 -18 3 1164 1745 120 72 16 chr17 76019415 76019719 -19252932 + ORR1A4 LTR MaLR 1 321 -8 3 1164 719 239 367 19 chr17 76019728 76020039 -19252612 + MTD LTR MaLR 1 419 0 3 1164 1021 179 100 20 chr17 76020636 76020836 -19251815 + B3 SINE B2 1 216 0 3 1164 291 337 0 0 chr17 76021029 76021115 -19251536 + RSINE1 SINE B4 1 86 -79 4 1164 807 129 9 0 chr17 76021039 76021168 -19251483 + B2_Mm2 SINE B2 10 149 -67 4 1164 480 224 31 0 chr17 76021177 76021275 -19251376 - Lx8 LINE L1 -584 6889 6789 4 1164 549 246 31 0 chr17 76021620 76021750 -19250901 + B1F SINE Alu 3 136 -13 4 145 459 0 0 0 chr17 76021753 76021804 -19250847 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 4 1165 202 29 28 28 chr17 76022968 76023004 -19249647 + (TTA)n Simple_repeat Simple_repeat 2 37 0 4 1165 1299 260 40 48 chr17 76023070 76023422 -19249229 - MTE2b LTR MaLR -13 366 18 4 1165 297 269 132 40 chr17 76023889 76024040 -19248611 + L1MA6 LINE L1 5516 5680 -620 4 1165 289 333 17 42 chr17 76024050 76024169 -19248482 + PB1D10 SINE Alu 1 116 -1 4 1165 324 120 0 0 chr17 76024169 76024219 -19248432 + (CAAA)n Simple_repeat Simple_repeat 1 50 0 4 1165 829 294 102 30 chr17 76024234 76024795 -19247856 + L1MA6 LINE L1 5695 6295 -5 4 1165 240 176 59 0 chr17 76025233 76025284 -19247367 - L1MB1 LINE L1 -2 6166 6113 5 1165 647 259 145 38 chr17 76025288 76025790 -19246861 - L1M3d LINE L1 -4521 1782 1045 5 1165 2263 120 125 8 chr17 76025833 76026186 -19246465 - ORR1B1 LTR MaLR 0 394 1 5 1165 748 285 50 0 chr17 76026186 76026365 -19246286 + B3 SINE B2 2 189 -27 5 1165 4850 69 31 0 chr17 76026416 76027023 -19245628 - L1_Mus1 LINE L1 -2 6565 5940 5 1165 622 306 21 8 chr17 76027072 76027309 -19245342 - L1M3d LINE L1 -4968 1335 1096 5 1165 383 329 38 13 chr17 76027406 76027563 -19245088 - L1M3d LINE L1 -5720 583 423 5 1165 251 254 77 90 chr17 76027995 76028073 -19244578 + B3A SINE B2 3 79 -119 5 1165 247 324 42 92 chr17 76028073 76028114 -19244537 + B4A SINE B4 3 115 -177 5 1165 299 169 0 17 chr17 76028137 76028197 -19244454 + B4A SINE B4 182 240 -52 5 1165 573 15 0 0 chr17 76028224 76028290 -19244361 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 1165 1322 34 0 0 chr17 76028462 76028609 -19244042 + B1_Mus1 SINE Alu 1 147 -1 5 1165 325 32 0 73 chr17 76028660 76028728 -19243923 + (ACTTG)n Simple_repeat Simple_repeat 5 67 0 6 1165 950 110 7 0 chr17 76030025 76030161 -19242490 - B1_Mus1 SINE Alu -3 145 9 6 1165 407 309 55 12 chr17 76030262 76030426 -19242225 + L1M4c LINE L1 14 184 -6358 6 1165 640 316 75 38 chr17 76030460 76031010 -19241641 + L1M4c LINE L1 1407 1976 -4670 6 1165 343 132 29 0 chr17 76031033 76031101 -19241550 + CT-rich Low_complexity Low_complexity 2 71 0 6 1165 287 199 92 7 chr17 76031622 76031764 -19240887 + L1M4c LINE L1 3643 3796 -2848 6 1165 329 252 48 10 chr17 76031896 76032000 -19240651 + Lx8 LINE L1 7037 7144 -329 6 1165 240 234 19 96 chr17 76032200 76032304 -19240347 + L1M4c LINE L1 5233 5328 -1316 6 1165 392 331 83 0 chr17 76032323 76032444 -19240207 - B1F2 SINE Alu -7 142 12 6 1165 511 235 62 40 chr17 76032548 76032774 -19239877 + L1M4c LINE L1 5444 5674 -970 6 1165 234 310 42 14 chr17 76032781 76032853 -19239798 + B4 SINE B4 81 154 -138 6 1165 438 216 109 73 chr17 76032792 76032902 -19239749 + PB1 SINE Alu 7 120 0 6 1165 25 0 0 0 chr17 76032931 76032956 -19239695 + AT_rich Low_complexity Low_complexity 1 25 0 6 1165 493 287 70 23 chr17 76032972 76033143 -19239508 - B3A SINE B2 -17 181 3 6 1165 21 0 0 0 chr17 76033234 76033255 -19239396 + AT_rich Low_complexity Low_complexity 1 21 0 7 1165 352 77 15 15 chr17 76033307 76033373 -19239278 + (TA)n Simple_repeat Simple_repeat 1 66 0 7 1165 504 294 54 51 chr17 76033379 76033673 -19238978 + L1M4c LINE L1 5859 6153 -529 6 1165 189 0 0 0 chr17 76033855 76033876 -19238775 + (CAG)n Simple_repeat Simple_repeat 1 21 0 7 1165 198 0 0 0 chr17 76033889 76033911 -19238740 + (CAA)n Simple_repeat Simple_repeat 3 24 0 7 1165 360 0 0 0 chr17 76034198 76034238 -19238413 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 1165 754 318 108 31 chr17 76034295 76034655 -19237996 - MLT1D LTR MaLR -106 399 12 7 1165 765 277 176 20 chr17 76035335 76035681 -19236970 + MTD LTR MaLR 3 402 -17 7 1165 592 99 10 19 chr17 76035681 76035784 -19236867 + (CAA)n Simple_repeat Simple_repeat 1 102 0 7 1165 263 296 30 30 chr17 76035944 76036045 -19236606 + PB1D7 SINE Alu 5 105 -15 7 1165 1434 247 98 50 chr17 76036564 76037025 -19235626 + RMER1C Other Other 860 1342 0 7 1165 272 130 58 0 chr17 76037048 76037117 -19235534 + (CATAT)n Simple_repeat Simple_repeat 1 73 0 8 1165 191 261 14 0 chr17 76037192 76037261 -19235390 + CT-rich Low_complexity Low_complexity 3 72 0 8 1165 773 201 176 27 chr17 76037432 76037620 -19235031 - Lx9 LINE L1 -34 7610 7397 8 1165 2019 199 44 39 chr17 76037620 76038032 -19234619 + MTC LTR MaLR 5 418 -3 8 1165 773 201 176 27 chr17 76038032 76038099 -19234552 - Lx9 LINE L1 -248 7396 7317 8 1165 246 176 0 0 chr17 76038103 76038154 -19234497 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 8 1165 475 184 22 14 chr17 76038158 76038296 -19234355 + CT-rich Low_complexity Low_complexity 1 139 0 8 1165 786 215 0 0 chr17 76038297 76038432 -19234219 - B1_Mur2 SINE Alu -6 143 9 8 1165 677 284 154 21 chr17 76038723 76039054 -19233597 + RMER5 LTR ERV1 42 416 -118 8 1165 234 266 15 15 chr17 76039890 76039955 -19232696 - PB1D10 SINE Alu -5 112 48 8 1165 198 0 0 0 chr17 76041119 76041141 -19231510 + (CAA)n Simple_repeat Simple_repeat 2 23 0 8 1165 189 0 0 0 chr17 76042020 76042041 -19230610 + (T)n Simple_repeat Simple_repeat 1 21 0 9 1165 1474 132 17 17 chr17 76042341 76042580 -19230071 - Lx2 LINE L1 0 6997 6759 9 1165 498 146 0 0 chr17 76042781 76042877 -19229774 + (CA)n Simple_repeat Simple_repeat 1 96 0 9 1165 587 193 62 15 chr17 76042880 76043079 -19229572 - Lx7 LINE L1 -1792 5904 5674 9 1165 21 0 0 0 chr17 76044076 76044097 -19228554 + AT_rich Low_complexity Low_complexity 1 21 0 9 1165 1946 230 15 67 chr17 76044119 76044660 -19227991 + RMER19C LTR ERVK 99 611 0 9 1165 274 296 0 12 chr17 76046254 76046336 -19226315 + L2a LINE L2 3341 3421 -5 9 1165 287 290 26 84 chr17 76047172 76047300 -19225351 - PB1 SINE Alu -6 143 14 9 1165 694 302 26 11 chr17 76047477 76047668 -19224983 - B4 SINE B4 0 292 99 9 1165 1150 267 145 56 chr17 76047857 76048396 -19224255 - Lx9 LINE L1 -215 7429 6843 9 1165 458 185 62 0 chr17 76048408 76048489 -19224162 - B4 SINE B4 -205 87 2 1 1165 2954 255 40 38 chr17 76048535 76049244 -19223407 + Lx6 LINE L1 6615 7324 -136 1 1165 2006 166 102 11 chr17 76049247 76049514 -19223137 + RMER1A Other Other 611 910 -120 1 1165 324 0 0 0 chr17 76049514 76049550 -19223101 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1165 2006 166 102 11 chr17 76049550 76049653 -19222998 + RMER1A Other Other 911 1014 -16 1 1165 999 25 0 0 chr17 76049995 76050113 -19222538 + (TTC)n Simple_repeat Simple_repeat 1 118 0 1 1165 1256 29 0 0 chr17 76050113 76050250 -19222401 - B1_Mus1 SINE Alu -11 137 1 1 1165 250 311 118 12 chr17 76050278 76050532 -19222119 - HAL1 LINE L1 0 2507 2227 1 1165 400 278 32 63 chr17 76050923 76051033 -19221618 - B1F SINE Alu -21 126 19 1 1165 3052 106 47 7 chr17 76051033 76051461 -19221190 - BGLII_A LTR ERVK 0 445 1 1 1165 400 273 34 60 chr17 76051461 76051484 -19221167 - B1F SINE Alu -131 18 1 1 1165 2269 276 92 13 chr17 76052164 76052932 -19219719 - Lx8 LINE L1 -45 7428 6600 1 1165 290 212 61 24 chr17 76052932 76053014 -19219637 - Lx8 LINE L1 -987 6486 6402 1 1165 2156 87 45 0 chr17 76053072 76053384 -19219267 - IAPEY2_LTR LTR ERVK 0 357 32 1 1165 481 326 48 40 chr17 76053394 76053621 -19219030 - Lx8 LINE L1 -1148 6325 6097 1 1165 2045 247 151 19 chr17 76053633 76054330 -19218321 + RCHARR1 DNA MER1_type 6 794 -180 1 1165 205 330 18 9 chr17 76054371 76054481 -19218170 + CT-rich Low_complexity Low_complexity 5 115 0 1 1165 329 290 65 0 chr17 76054515 76054608 -19218043 + ORR1E LTR MaLR 3 101 -258 1 1165 723 167 160 0 chr17 76054608 76054764 -19217887 - URR1A DNA MER1_type 0 226 46 1 1165 614 296 7 20 chr17 76054775 76054923 -19217728 + ORR1E LTR MaLR 89 234 -125 1 1165 231 250 0 62 chr17 76054951 76055015 -19217636 + MTEb LTR MaLR 175 234 -125 1 1165 554 268 9 56 chr17 76055044 76055244 -19217407 + MTEb LTR MaLR 201 370 0 1 1165 1453 75 11 11 chr17 76055263 76055452 -19217199 - B2_Mm1t SINE B2 -4 189 1 1 1165 229 247 99 0 chr17 76055532 76055613 -19217038 + RCHARR1 DNA MER1_type 880 968 -6 1 1165 1147 209 29 0 chr17 76055858 76056068 -19216583 - B3 SINE B2 0 216 1 1 1165 192 152 0 0 chr17 76056606 76056639 -19216012 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 1 1165 196 434 0 0 chr17 76056640 76056739 -19215912 - L2b LINE L2 -32 3343 3245 1 1165 226 369 85 44 chr17 76056984 76057279 -19215372 - L2b LINE L2 -447 2972 2666 1 1165 445 287 95 25 chr17 76059117 76059317 -19213334 - L2a LINE L2 0 3426 3213 1 1165 303 209 53 20 chr17 76059363 76059514 -19213137 + (TTATA)n Simple_repeat Simple_repeat 3 158 0 1 1165 307 293 0 0 chr17 76059844 76059926 -19212725 - ID4_ SINE ID 0 83 2 1 1165 361 73 0 0 chr17 76059983 76060038 -19212613 + Lx4A LINE L1 7004 7058 0 1 1165 24 0 0 0 chr17 76060038 76060062 -19212589 + AT_rich Low_complexity Low_complexity 1 24 0 1 1165 269 343 22 0 chr17 76062079 76062216 -19210435 - L2a LINE L2 -1362 2057 1918 1 1165 270 160 0 0 chr17 76062216 76062266 -19210385 + GA-rich Low_complexity Low_complexity 1 50 0 1 1165 251 254 30 0 chr17 76062371 76062438 -19210213 + CT-rich Low_complexity Low_complexity 3 71 0 1 1165 483 294 20 7 chr17 76062443 76062590 -19210061 - B1_Mur2 SINE Alu 0 149 1 1 1165 333 0 0 0 chr17 76062952 76062989 -19209662 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 1 1165 1341 249 53 20 chr17 76062991 76063347 -19209304 - Lx5 LINE L1 -17 7033 6666 1 1165 892 126 7 5 chr17 76063395 76063810 -19208841 + (TCTA)n Simple_repeat Simple_repeat 1 415 0 1 1165 372 259 49 0 chr17 76063812 76063893 -19208758 - B3 SINE B2 -116 100 16 1 1165 440 174 11 0 chr17 76063996 76064088 -19208563 + (TTTA)n Simple_repeat Simple_repeat 1 93 0 1 1165 4283 36 0 0 chr17 76064093 76064619 -19208032 - L1Md_T LINE L1 0 6582 6080 1 1165 213 173 0 0 chr17 76064619 76064645 -19208006 + T-rich Low_complexity Low_complexity 2 27 0 1 1165 26 0 0 0 chr17 76066542 76066568 -19206083 + AT_rich Low_complexity Low_complexity 1 26 0 1 1165 219 321 91 42 chr17 76066893 76067036 -19205615 + MER5B DNA MER1_type 29 178 0 1 1165 423 313 41 45 chr17 76067531 76067752 -19204899 + MIRb SINE MIR 41 260 -8 1 1165 1409 204 7 6 chr17 76068010 76068391 -19204260 + L1VL4 LINE L1 444 825 -5510 1 1165 32651 63 6 1 chr17 76068387 76073577 -19199074 + L1Md_F2 LINE L1 416 5586 -297 1 1165 8063 48 0 5 chr17 76073578 76074568 -19198083 + L1Md_F2 LINE L1 5588 6572 -10 1 1165 9174 156 14 5 chr17 76074568 76076438 -19196213 + L1VL4 LINE L1 818 2707 -908 1 1165 7112 139 43 34 chr17 76076492 76078842 -19193809 + Lx2B LINE L1 4623 6986 -14 1 1165 192 40 0 0 chr17 76079058 76079083 -19193568 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 1 1165 214 245 0 0 chr17 76079179 76079228 -19193423 + (TTCA)n Simple_repeat Simple_repeat 3 51 0 1 1165 424 264 0 0 chr17 76079730 76079821 -19192830 + PB1D10 SINE Alu 14 104 -13 1 1165 345 287 119 32 chr17 76080630 76080756 -19191895 - MLT1A1 LTR MaLR -271 137 1 1 1165 1417 183 80 85 chr17 76080782 76081147 -19191504 - ORR1D2 LTR MaLR 0 370 8 1 1165 7420 73 11 15 chr17 76081217 76082401 -19190250 - L1_Mus3 LINE L1 -4 6634 5456 1 1165 526 222 31 1 chr17 76083479 76083652 -19188999 - L1MB7 LINE L1 -450 5850 5670 1 1165 652 271 27 62 chr17 76083755 76083979 -19188672 - B4A SINE B4 0 292 77 1 1165 189 0 0 0 chr17 76084079 76084100 -19188551 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 1165 900 116 3 25 chr17 76084100 76084257 -19188394 - B1_Mus1 SINE Alu -9 141 1 1 1165 288 246 69 0 chr17 76084149 76084279 -19188372 - ORR1D2-int LTR MaLR -755 754 616 1 1165 362 314 67 0 chr17 76084326 76084431 -19188220 - B4A SINE B4 -179 113 2 1 1165 565 295 69 45 chr17 76085807 76086009 -19186642 + B4A SINE B4 68 274 -18 1 1165 324 0 0 0 chr17 76086012 76086048 -19186603 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1165 674 211 34 27 chr17 76086747 76086893 -19185758 - B1_Mur1 SINE Alu -2 147 1 1 1165 794 255 46 15 chr17 76086975 76087170 -19185481 + B3 SINE B2 1 201 -15 1 1165 989 268 84 38 chr17 76087857 76088511 -19184140 - L1MDa LINE L1 -3505 3032 2349 1 1165 4334 126 22 6 chr17 76088564 76089244 -19183407 - Lx LINE L1 -3 6651 5961 1 1165 4405 132 14 16 chr17 76089244 76090035 -19182616 + L1_Mur2 LINE L1 3503 4291 -1586 1 1165 466 263 52 17 chr17 76090257 76090373 -19182278 - B1F SINE Alu -9 140 21 1 1165 483 63 0 0 chr17 76090408 76090471 -19182180 + (TCC)n Simple_repeat Simple_repeat 1 63 0 1 1165 415 261 65 22 chr17 76090526 76090710 -19181941 - L1MDa LINE L1 -4658 1975 1784 1 1165 428 214 16 46 chr17 76090822 76090920 -19181731 + PB1D10 SINE Alu 26 120 -29 1 1165 270 347 13 0 chr17 76090920 76090995 -19181656 + ID4 SINE ID 3 78 -5 1 1165 996 33 0 0 chr17 76090996 76091116 -19181535 + (TA)n Simple_repeat Simple_repeat 2 121 0 1 1165 573 290 100 55 chr17 76091118 76091479 -19181172 - L1MDa LINE L1 -5128 1505 1129 1 1165 343 303 24 6 chr17 76091679 76091845 -19180806 - L1MA6 LINE L1 -286 6014 5846 1 1165 372 250 17 0 chr17 76091873 76092049 -19180602 + GA-rich Low_complexity Low_complexity 2 180 0 1 1165 248 333 13 0 chr17 76092471 76092549 -19180102 - BC1_Mm scRNA scRNA -58 94 16 1 1165 421 333 24 8 chr17 76092596 76092723 -19179928 - B1F1 SINE Alu -20 129 1 1 1165 483 18 0 0 chr17 76092979 76093035 -19179616 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1165 310 372 151 23 chr17 76093326 76093678 -19178973 - LTR16A LTR ERVL -13 438 42 1 1165 248 330 91 55 chr17 76094368 76094432 -19178219 - MIRb SINE MIR -1 261 199 1 1165 2172 157 85 3 chr17 76094432 76094821 -19177830 + MTC LTR MaLR 1 421 0 1 1165 248 329 91 55 chr17 76094821 76094980 -19177671 - MIRb SINE MIR -66 202 28 1 1165 1128 88 0 0 chr17 76096531 76096679 -19175972 - B1_Mus1 SINE Alu 0 148 1 1 1165 3078 184 120 3 chr17 76096760 76097416 -19175235 - Lx5 LINE L1 0 7050 6318 1 1165 194 186 97 48 chr17 76097449 76097511 -19175140 - L4 LINE RTE -446 1583 1519 1 1165 435 294 132 11 chr17 76097518 76097549 -19175102 - B3 SINE B2 -4 212 179 1 1165 267 93 0 0 chr17 76097549 76097592 -19175059 + (TCTG)n Simple_repeat Simple_repeat 4 46 0 1 1165 536 287 102 0 chr17 76097592 76097749 -19174902 - B3A SINE B2 -25 173 1 1 1165 273 167 109 22 chr17 76098322 76098414 -19174237 - MER53 DNA hAT -1 192 93 1 1165 256 368 51 8 chr17 76098669 76098787 -19173864 - B1F SINE Alu -5 144 22 1 1165 324 0 0 0 chr17 76098821 76098857 -19173794 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1165 246 62 0 0 chr17 76099328 76099360 -19173291 + (TATG)n Simple_repeat Simple_repeat 4 35 0 1 1165 303 225 108 0 chr17 76100465 76100576 -19172075 - L1MA6 LINE L1 -1 6299 6177 1 1165 552 323 33 1 chr17 76100610 76100793 -19171858 - B3 SINE B2 -9 189 1 1 1165 212 156 0 43 chr17 76100794 76100841 -19171810 + T-rich Low_complexity Low_complexity 4 48 0 1 1165 1528 318 70 23 chr17 76101750 76102418 -19170233 + Lx8 LINE L1 6637 7345 -128 1 1165 486 33 0 0 chr17 76102418 76102478 -19170173 + (GA)n Simple_repeat Simple_repeat 2 61 0 1 1165 1528 318 70 23 chr17 76102478 76102606 -19170045 + Lx8 LINE L1 7346 7470 -3 1 1165 1481 209 51 40 chr17 76105269 76105434 -19167217 + ORR1C1 LTR MaLR 1 165 -213 1 1165 207 69 0 0 chr17 76105434 76105463 -19167188 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 1 1165 1481 209 51 40 chr17 76105463 76105671 -19166980 + ORR1C1 LTR MaLR 166 377 -1 1 1165 254 106 10 115 chr17 76106932 76107051 -19165600 + (CAAAC)n Simple_repeat Simple_repeat 1 106 0 1 1165 246 353 49 61 chr17 76107273 76107436 -19165215 + MLT1C LTR MaLR 1 161 -306 1 1165 476 325 113 72 chr17 76107448 76107783 -19164868 + ORR1E LTR MaLR 9 357 -2 1 1165 1727 181 38 46 chr17 76108497 76108867 -19163784 + ORR1B2 LTR MaLR 1 367 0 1 1165 927 252 173 40 chr17 76109240 76109432 -19163219 + RMER21B LTR ERV1 52 242 -600 1 1165 387 0 0 0 chr17 76109432 76109475 -19163176 + (TC)n Simple_repeat Simple_repeat 1 43 0 1 1165 927 252 173 40 chr17 76109475 76109509 -19163142 + RMER21B LTR ERV1 243 298 -544 1 1165 1349 51 11 0 chr17 76109509 76109686 -19162965 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 1 1165 927 252 173 40 chr17 76109686 76109834 -19162817 + RMER21B LTR ERV1 299 477 -365 1 1165 302 271 80 34 chr17 76110500 76110588 -19162063 - MLT1N2 LTR MaLR -31 531 440 1 1165 223 87 0 61 chr17 76110946 76110995 -19161656 + (TAA)n Simple_repeat Simple_repeat 3 48 0 1 1165 441 0 0 0 chr17 76111738 76111787 -19160864 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 1165 376 343 86 41 chr17 76111825 76112068 -19160583 - ERVL-int LTR ERVL -1100 4657 4299 1 1165 1560 122 6 5 chr17 76114430 76114716 -19157935 + Lx4A LINE L1 5555 5848 -1210 1 1165 2154 174 28 0 chr17 76114728 76115119 -19157532 + Lx4A LINE L1 6522 6923 -135 1 1165 284 245 112 0 chr17 76115466 76115564 -19157087 + MER53 DNA hAT 2 110 -83 2 1165 3038 90 14 2 chr17 76116367 76116789 -19155862 + L1_Mus4 LINE L1 6203 6629 -7 2 1165 1201 220 20 8 chr17 76118857 76119109 -19153542 - Lx6 LINE L1 -269 7191 6937 2 1165 295 343 32 12 chr17 76119155 76119292 -19153359 - PB1D7 SINE Alu -10 139 1 2 1165 625 314 124 38 chr17 76119645 76120125 -19152526 - MLT1F2 LTR MaLR -5 564 3 2 1165 21 36 0 0 chr17 76120163 76120191 -19152460 + AT_rich Low_complexity Low_complexity 1 28 0 2 1165 23 33 0 0 chr17 76120266 76120296 -19152355 + AT_rich Low_complexity Low_complexity 1 30 0 2 1165 213 241 192 0 chr17 76120902 76121013 -19151638 + MIRm SINE MIR 90 217 -51 2 1165 21 0 0 0 chr17 76121459 76121480 -19151171 + AT_rich Low_complexity Low_complexity 1 21 0 2 1165 538 339 34 6 chr17 76121621 76121704 -19150947 + ID SINE ID 2 89 -135 2 1165 310 320 75 28 chr17 76121704 76121810 -19150841 + B1F2 SINE Alu 4 114 -35 2 1165 489 278 0 9 chr17 76122098 76122207 -19150444 + RSINE1 SINE B4 2 109 -56 2 1165 30717 23 15 0 chr17 76123177 76127023 -19145628 + L1Md_T LINE L1 1683 5585 -298 2 1165 8214 43 1 0 chr17 76127024 76128018 -19144633 + L1Md_T LINE L1 5587 6581 -1 2 1165 257 305 53 0 chr17 76128354 76128485 -19144166 - L1M5 LINE L1 -359 5881 5744 2 1165 492 62 0 0 chr17 76128529 76128593 -19144058 + (TTA)n Simple_repeat Simple_repeat 2 65 0 2 1165 348 345 100 20 chr17 76129192 76129443 -19143208 - L1M5 LINE L1 -1185 4961 4691 2 1165 213 39 0 0 chr17 76131106 76131132 -19141519 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 2 1165 192 40 0 0 chr17 76131952 76131977 -19140674 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 1165 228 273 215 15 chr17 76131985 76132115 -19140536 - RSINE1 SINE B4 -6 159 4 2 1165 2697 101 32 5 chr17 76132220 76132660 -19139991 - L1_Mur2 LINE L1 -1251 4626 4175 2 1165 378 0 0 0 chr17 76133600 76133642 -19139009 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 1165 267 103 0 0 chr17 76133642 76133680 -19138971 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 1165 275 345 94 35 chr17 76134862 76135117 -19137534 + L3 LINE CR1 1948 2217 -2272 2 1165 255 237 21 21 chr17 76135366 76135461 -19137190 + (TTATA)n Simple_repeat Simple_repeat 5 99 0 2 1165 883 153 317 0 chr17 76135532 76135715 -19136936 + RMER19A LTR ERVK 3 243 -494 2 1165 1525 213 55 9 chr17 76135717 76136063 -19136588 + Lx2B LINE L1 6635 6996 -4 2 1165 5432 87 7 21 chr17 76136104 76137663 -19134988 - L1Md_F LINE L1 -3857 2026 631 2 1165 1746 178 189 0 chr17 76137814 76138147 -19134504 + MTC LTR MaLR 2 397 -24 2 1165 666 314 21 31 chr17 76138150 76138436 -19134215 - Lx7 LINE L1 -481 7215 6933 2 1165 393 248 88 0 chr17 76138436 76138549 -19134102 + ORR1D1 LTR MaLR 252 374 0 2 1165 1285 284 71 38 chr17 76140626 76140679 -19131972 - Lx6 LINE L1 -26 7434 7398 2 1165 3195 56 5 0 chr17 76140679 76141073 -19131578 - MTA_Mm LTR MaLR 0 396 1 2 1165 1285 281 72 32 chr17 76141073 76141549 -19131102 - Lx6 LINE L1 -63 7397 6539 2 1165 315 248 91 36 chr17 76141588 76141758 -19130893 - Lx6 LINE L1 -683 6367 6143 2 1165 279 361 39 54 chr17 76142392 76142521 -19130130 + MIR SINE MIR 13 139 -123 2 1165 704 340 39 39 chr17 76142542 76142900 -19129751 + MLT1A0 LTR MaLR 3 360 -5 2 1165 469 340 5 10 chr17 76143701 76143897 -19128754 + Lx8 LINE L1 6919 7113 -360 2 1165 186 368 78 9 chr17 76144577 76144692 -19127959 - L4 LINE RTE -479 1550 1428 2 1165 189 147 0 0 chr17 76144990 76145024 -19127627 + (TCTA)n Simple_repeat Simple_repeat 3 36 0 2 1165 405 313 26 33 chr17 76146231 76146383 -19126268 - RSINE1 SINE B4 -14 151 1 2 1165 725 307 28 55 chr17 76147341 76147364 -19125287 + B4A SINE B4 1 25 -267 2 1165 1447 142 4 13 chr17 76147364 76147592 -19125059 - URR1A DNA MER1_type 0 226 1 2 1165 725 307 28 55 chr17 76147592 76147858 -19124793 + B4A SINE B4 26 282 -10 2 1165 303 49 0 0 chr17 76147903 76147944 -19124707 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1165 267 93 0 0 chr17 76147945 76147988 -19124663 + (GA)n Simple_repeat Simple_repeat 1 43 0 2 1165 248 106 64 0 chr17 76148089 76148136 -19124515 + C-rich Low_complexity Low_complexity 1 50 0 2 1165 204 245 0 0 chr17 76148212 76148261 -19124390 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 1165 325 301 88 40 chr17 76148292 76148613 -19124038 - MLT1A0 LTR MaLR -1 389 8 2 1165 276 186 0 0 chr17 76148621 76148680 -19123971 + (TGAA)n Simple_repeat Simple_repeat 2 60 0 2 1165 310 330 10 39 chr17 76150316 76150420 -19122231 - ORR1E LTR MaLR -250 109 9 2 1165 374 95 0 45 chr17 76150414 76150480 -19122171 - B2_Mm2 SINE B2 -11 184 122 2 1165 277 345 140 39 chr17 76150595 76151048 -19121603 + L2a LINE L2 2724 3230 -196 2 1165 22 0 0 0 chr17 76151365 76151387 -19121264 + AT_rich Low_complexity Low_complexity 1 22 0 2 1165 627 281 18 53 chr17 76151466 76151635 -19121016 - RSINE1 SINE B4 0 165 3 2 1165 25 0 0 0 chr17 76151641 76151666 -19120985 + AT_rich Low_complexity Low_complexity 1 25 0 2 1165 1153 252 124 50 chr17 76152377 76152474 -19120177 - Charlie5 DNA MER1_type -54 2570 2470 2 1165 2144 145 3 3 chr17 76152474 76152800 -19119851 - ORR1A3 LTR MaLR 0 326 1 2 145 1153 252 124 50 chr17 76152800 76152898 -19119753 - Charlie5 DNA MER1_type -155 2469 2374 2 1166 608 264 19 85 chr17 76152898 76153109 -19119542 + B3A SINE B2 2 198 0 2 1166 1153 252 124 50 chr17 76153109 76153531 -19119120 - Charlie5 DNA MER1_type -251 2373 1906 2 1166 5949 101 26 0 chr17 76153534 76154472 -19118179 + L1_Mm LINE L1 1897 2858 -3025 2 1166 1571 127 33 0 chr17 76154472 76154716 -19117935 + L1_Mus3 LINE L1 6385 6636 -2 2 1166 838 97 0 0 chr17 76154837 76154961 -19117690 + L1_Mus2 LINE L1 5894 6017 -549 2 1166 1750 264 60 35 chr17 76155072 76155637 -19117014 - RLTR1 LTR ERV1 -16 608 30 2 1166 29845 92 13 5 chr17 76155995 76161345 -19111306 + L1Md_F2 LINE L1 190 5585 -298 2 1166 7325 82 6 6 chr17 76161346 76162341 -19110310 + L1Md_F2 LINE L1 5587 6581 -1 2 1166 274 107 0 0 chr17 76162489 76162537 -19110114 - L1_Mus2 LINE L1 -293 6289 6242 2 1166 2076 93 0 3 chr17 76162537 76162829 -19109822 + L1_Mus2 LINE L1 6276 6566 0 2 1166 257 266 25 25 chr17 76165593 76165674 -19106977 + MER21-int LTR ERV1 2321 2401 -1790 2 1166 247 186 68 0 chr17 76165808 76165867 -19106784 + RSINE1 SINE B4 68 130 -35 2 1166 297 0 0 0 chr17 76165875 76165908 -19106743 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1166 663 13 0 0 chr17 76165908 76165984 -19106667 + (GA)n Simple_repeat Simple_repeat 1 76 0 2 1166 517 281 58 29 chr17 76165993 76166165 -19106486 + MER21-int LTR ERV1 2866 3042 -1149 2 1166 26 30 0 0 chr17 76166951 76166984 -19105667 + AT_rich Low_complexity Low_complexity 1 33 0 2 1166 321 208 42 0 chr17 76167051 76167123 -19105528 - HAL1-3A_ME LINE L1 -807 2051 1977 2 1166 268 290 129 0 chr17 76167150 76167212 -19105439 - B1F1 SINE Alu -77 72 3 2 1166 269 140 0 0 chr17 76167288 76167338 -19105313 - B3 SINE B2 0 216 167 2 1166 199 0 0 61 chr17 76167472 76167505 -19105146 + (TTTTTG)n Simple_repeat Simple_repeat 5 35 0 2 1166 1188 75 7 0 chr17 76167505 76167652 -19104999 - B1_Mus1 SINE Alu 0 148 1 2 1166 329 240 127 92 chr17 76169129 76169271 -19103380 - MLT1A1 LTR MaLR -14 394 248 2 1166 258 297 0 42 chr17 76169431 76169526 -19103125 - MLT1A1 LTR MaLR -314 94 4 2 1166 1266 45 0 0 chr17 76169917 76170074 -19102577 + (TTCCC)n Simple_repeat Simple_repeat 1 157 0 2 1166 183 232 0 0 chr17 76170085 76170141 -19102510 + C-rich Low_complexity Low_complexity 1 56 0 2 1166 2564 140 20 10 chr17 76170784 76171181 -19101470 - Lx4A LINE L1 -159 6899 6499 2 1166 1162 156 48 5 chr17 76171433 76171639 -19101012 - Lx3C LINE L1 -380 6596 6382 2 1166 1599 235 104 69 chr17 76173142 76173690 -19098961 - RMER2 LTR ERV1 0 567 1 2 1166 666 58 0 0 chr17 76174535 76174622 -19098029 + (CA)n Simple_repeat Simple_repeat 2 88 0 2 1166 529 229 55 7 chr17 76174624 76174769 -19097882 + L1MA7 LINE L1 5811 5962 -329 2 1166 327 252 45 9 chr17 76174951 76175063 -19097588 + L1MA7 LINE L1 6056 6171 -120 2 1166 562 246 0 0 chr17 76175065 76175179 -19097472 + PB1D10 SINE Alu 2 115 -2 2 1166 235 245 20 0 chr17 76175644 76175693 -19096958 + PB1D10 SINE Alu 36 85 -32 2 1166 279 0 0 0 chr17 76176585 76176616 -19096035 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1166 1151 60 0 0 chr17 76176617 76176750 -19095901 - B1_Mus2 SINE Alu -12 135 3 2 1166 204 40 0 0 chr17 76176763 76176788 -19095863 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 2 1166 684 295 183 0 chr17 76176849 76177090 -19095561 - B4 SINE B4 -7 285 1 2 1166 231 321 25 59 chr17 76177091 76177210 -19095441 - Tigger7 DNA MER2_type -121 2370 2256 2 1166 300 53 0 0 chr17 76177210 76177248 -19095403 + (TC)n Simple_repeat Simple_repeat 1 38 0 2 1166 506 256 96 0 chr17 76177250 76177406 -19095245 - Tigger7 DNA MER2_type -226 2265 2095 2 1166 228 327 36 9 chr17 76177586 76177697 -19094954 - L1ME1 LINE L1 -49 6130 6017 2 1166 659 330 69 78 chr17 76177685 76178170 -19094481 - L1MB8 LINE L1 -279 5899 5440 2 1166 400 275 38 29 chr17 76178170 76178275 -19094376 - PB1D10 SINE Alu -10 107 2 2 1166 735 281 76 32 chr17 76178275 76178720 -19093931 - L1MB8 LINE L1 -739 5439 4957 2 1166 1219 306 24 13 chr17 76179160 76179620 -19093031 - L1MB8 LINE L1 -4 6174 5710 2 1166 475 315 39 94 chr17 76179751 76179954 -19092697 - B4A SINE B4 -12 280 89 2 1166 189 0 0 0 chr17 76181644 76181665 -19090986 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1166 2378 186 9 20 chr17 76181762 76182222 -19090429 + RMER4A LTR ERVK 3 457 -9 2 1166 507 17 0 0 chr17 76182263 76182323 -19090328 + (TC)n Simple_repeat Simple_repeat 1 60 0 2 1166 3440 137 34 0 chr17 76182376 76182879 -19089772 - Lx2B LINE L1 -5 6995 6476 2 1166 382 317 78 23 chr17 76183295 76183692 -19088959 - MLT2B4 LTR ERVL 0 554 1 2 1166 234 227 0 0 chr17 76183811 76183855 -19088796 - Tigger5 DNA MER2_type -71 2335 2292 2 1166 606 306 51 23 chr17 76183840 76184054 -19088597 - Tigger5 DNA MER2_type -2148 258 39 2 1166 22 0 0 0 chr17 76184366 76184388 -19088263 + AT_rich Low_complexity Low_complexity 1 22 0 2 1166 21 0 0 0 chr17 76184859 76184880 -19087771 + AT_rich Low_complexity Low_complexity 1 21 0 2 1166 2503 133 63 8 chr17 76184881 76185260 -19087391 - Lx4A LINE L1 -1 7057 6658 2 1166 386 295 137 44 chr17 76185348 76185575 -19087076 + MTD LTR MaLR 2 249 -170 3 1166 415 344 26 37 chr17 76185623 76185813 -19086838 - B4A SINE B4 -58 234 47 3 1166 221 83 28 0 chr17 76186017 76186053 -19086598 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 1166 6354 121 43 5 chr17 76186103 76187026 -19085625 - RMER17B LTR ERVK 0 958 1 3 1166 228 303 54 33 chr17 76187033 76187125 -19085526 - RSINE1 SINE B4 -69 96 3 3 1166 440 310 130 55 chr17 76187703 76187956 -19084695 + B4A SINE B4 2 273 -19 3 1166 2964 118 97 24 chr17 76188249 76188985 -19083666 - RLTR13C1 LTR ERVK 0 983 1 3 1166 1088 149 35 25 chr17 76188987 76189186 -19083465 + URR1A DNA MER1_type 26 226 0 3 1166 414 0 0 0 chr17 76191810 76191856 -19080795 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1166 616 320 113 24 chr17 76192770 76193061 -19079590 - ORR1D2 LTR MaLR 0 370 54 3 1166 197 256 107 24 chr17 76193132 76193216 -19079435 + L2c LINE L2 3279 3369 -18 3 1166 477 236 335 5 chr17 76193389 76193589 -19079062 + B4A SINE B4 8 273 -19 3 1166 28 29 0 0 chr17 76193952 76193987 -19078664 + AT_rich Low_complexity Low_complexity 1 35 0 3 1166 5234 93 23 25 chr17 76194307 76195101 -19077550 - MusHAL1 LINE L1 -631 2081 1290 3 1166 1143 55 24 47 chr17 76196044 76196214 -19076437 - L1_Mus1 LINE L1 0 6567 6402 3 1166 360 0 0 0 chr17 76196549 76196589 -19076062 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1166 257 0 30 0 chr17 76197293 76197326 -19075325 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 3 1166 1193 78 0 0 chr17 76197327 76197481 -19075170 - B2_Mm2 SINE B2 -41 154 1 3 1166 1542 123 34 17 chr17 76198022 76198291 -19074360 - Lx5 LINE L1 -1066 5984 5731 3 1166 2523 245 23 22 chr17 76198933 76199801 -19072850 + L1_Mur3 LINE L1 17 684 -7044 3 1166 2553 215 56 2 chr17 76199852 76200424 -19072227 + L1_Mur3 LINE L1 507 1109 -6619 3 1166 6928 103 48 2 chr17 76200439 76201453 -19071198 - L1_Mus4 LINE L1 -12 6624 5586 3 1166 343 118 0 0 chr17 76201485 76201536 -19071115 + L1_Mur3 LINE L1 1868 1918 -3962 3 1166 388 104 115 13 chr17 76201532 76201610 -19071041 + L1_Mur3 LINE L1 5376 5461 -419 3 1166 2386 127 34 3 chr17 76201626 76201982 -19070669 + Lx2 LINE L1 6224 6590 -407 3 1166 410 0 0 20 chr17 76202031 76202082 -19070569 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 3 1166 5268 168 32 12 chr17 76202089 76202932 -19069719 + RMER13A LTR ERVK 1 860 0 3 1166 188 325 199 19 chr17 76203002 76203321 -19069330 - L2a LINE L2 -60 3366 2984 3 1166 323 271 49 180 chr17 76204548 76204876 -19067775 - Charlie4a DNA MER1_type -60 448 164 3 1166 365 231 41 11 chr17 76205655 76205748 -19066903 - B1F1 SINE Alu -16 104 13 3 1166 222 37 0 0 chr17 76205983 76206010 -19066641 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1166 1121 57 35 0 chr17 76206010 76206151 -19066500 - B1_Mm SINE Alu 0 147 2 3 1166 1358 91 20 0 chr17 76206324 76206523 -19066128 - L1_Mus3 LINE L1 -12 6626 6424 3 1166 315 222 100 0 chr17 76206707 76206797 -19065854 - ORR1E LTR MaLR -260 99 1 3 1166 275 293 39 65 chr17 76206803 76207033 -19065618 - L1MA6 LINE L1 -125 6175 5952 3 1166 193 300 20 20 chr17 76207096 76207147 -19065504 + L2b LINE L2 3312 3362 -13 3 1166 207 0 0 0 chr17 76207338 76207361 -19065290 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1166 684 249 141 22 chr17 76207399 76207665 -19064986 + B4A SINE B4 3 288 -4 3 1166 423 0 0 0 chr17 76207666 76207713 -19064938 + (TC)n Simple_repeat Simple_repeat 1 47 0 3 1166 258 56 0 0 chr17 76207713 76207748 -19064903 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1166 441 0 0 0 chr17 76210735 76210784 -19061867 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1166 551 260 162 13 chr17 76211080 76211389 -19061262 + Lx8 LINE L1 7116 7470 -3 3 1166 189 107 0 0 chr17 76211783 76211811 -19060840 + (A)n Simple_repeat Simple_repeat 1 28 0 3 1166 638 321 45 49 chr17 76212066 76212462 -19060189 - L1MB8 LINE L1 -16 6162 5776 3 1166 477 34 0 0 chr17 76212462 76212521 -19060130 + (TG)n Simple_repeat Simple_repeat 1 59 0 3 1166 638 321 45 49 chr17 76212521 76212573 -19060078 - L1MB8 LINE L1 -403 5775 5717 3 1166 811 276 81 60 chr17 76212606 76212953 -19059698 + RMER5 LTR ERV1 11 364 -170 3 1166 1523 241 55 5 chr17 76212971 76213355 -19059296 - Lx3C LINE L1 -2 6974 6572 3 1166 537 228 105 25 chr17 76213356 76213518 -19059133 + RMER5 LTR ERV1 350 524 -10 3 1166 489 17 0 0 chr17 76213707 76213765 -19058886 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 1166 486 0 0 0 chr17 76214347 76214401 -19058250 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 1166 418 250 11 0 chr17 76214472 76214560 -19058091 - B3 SINE B2 -27 189 101 3 1166 269 263 86 62 chr17 76214871 76215033 -19057618 + RLTR23 LTR ERV1 265 430 0 3 1166 403 272 87 10 chr17 76215033 76215124 -19057527 - B3 SINE B2 -96 99 1 3 1166 486 120 0 0 chr17 76217481 76217556 -19055095 + (GGA)n Simple_repeat Simple_repeat 1 75 0 3 1166 770 140 42 0 chr17 76218108 76218326 -19054325 + (TCTA)n Simple_repeat Simple_repeat 1 227 0 3 1166 241 24 73 0 chr17 76218475 76218516 -19054135 + (TTTTG)n Simple_repeat Simple_repeat 1 44 0 3 1166 1387 39 11 33 chr17 76219571 76219755 -19052896 - L1Md_F3 LINE L1 -1 6583 6404 3 1166 1160 111 0 6 chr17 76221355 76221536 -19051115 + (TTC)n Simple_repeat Simple_repeat 1 180 0 3 1166 263 276 0 62 chr17 76222315 76222396 -19050255 + ID4 SINE ID 1 76 -7 3 1166 518 29 43 0 chr17 76222419 76222489 -19050162 + (GGAGA)n Simple_repeat Simple_repeat 4 76 0 3 1166 1968 215 41 28 chr17 76223295 76223417 -19049234 - Lx5 LINE L1 -3 7047 6917 3 1166 444 51 0 0 chr17 76223417 76223476 -19049175 + (CA)n Simple_repeat Simple_repeat 1 59 0 3 1166 1968 215 41 28 chr17 76223476 76223821 -19048830 - Lx5 LINE L1 -134 6916 6574 3 1166 962 160 59 0 chr17 76223822 76223991 -19048660 + RLTR11A LTR ERVK 2 180 -348 3 1166 332 300 109 39 chr17 76224026 76224182 -19048469 - L1MEc LINE L1 -3645 2674 2508 3 1166 533 341 11 6 chr17 76224353 76224527 -19048124 - B4A SINE B4 -14 278 104 3 1166 362 279 131 12 chr17 76224747 76225143 -19047508 - L1MEc LINE L1 -3727 2592 2149 3 1166 276 319 20 68 chr17 76225217 76225365 -19047286 + MLT1A0 LTR MaLR 11 151 -214 3 1166 279 0 0 0 chr17 76225368 76225399 -19047252 + (TC)n Simple_repeat Simple_repeat 2 32 0 3 1166 559 328 19 23 chr17 76225786 76226045 -19046606 - MER58B DNA MER1_type -18 323 66 3 1166 22 35 0 0 chr17 76226244 76226273 -19046378 + AT_rich Low_complexity Low_complexity 1 29 0 3 1166 4091 52 0 0 chr17 76226651 76227174 -19045477 - L1Md_F2 LINE L1 -297 6285 5763 3 1166 1432 75 0 0 chr17 76227175 76227363 -19045288 + L1Md_F2 LINE L1 6284 6471 -111 3 1166 2005 204 204 60 chr17 76227359 76227548 -19045103 + Lx4A LINE L1 6223 6449 -609 3 1166 277 57 0 0 chr17 76227548 76227583 -19045068 - U2 snRNA snRNA -153 35 1 3 1166 2005 204 204 60 chr17 76227583 76228069 -19044582 + Lx4A LINE L1 6450 7037 -21 3 1166 222 37 0 0 chr17 76228069 76228096 -19044555 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 3 1166 256 257 12 86 chr17 76229548 76229629 -19043022 - ID4 SINE ID -5 78 4 3 1166 247 174 0 0 chr17 76229721 76229767 -19042884 + MT2A LTR ERVL 1 46 -487 3 1166 240 217 183 0 chr17 76229767 76229781 -19042870 + MTEb LTR MaLR 1 71 -308 3 1166 189 107 0 0 chr17 76229784 76229812 -19042839 + (CTG)n Simple_repeat Simple_repeat 2 29 0 3 1166 607 274 177 16 chr17 76229816 76230065 -19042586 + MT2A LTR ERVL 245 533 0 3 1166 243 0 0 0 chr17 76230206 76230233 -19042418 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 3 1166 852 205 83 0 chr17 76230508 76230713 -19041938 - Lx9 LINE L1 -637 7007 6786 3 1166 1764 178 48 15 chr17 76230715 76230988 -19041663 + Lx9 LINE L1 7233 7505 -139 3 1166 732 85 0 0 chr17 76230988 76231106 -19041545 + (TC)n Simple_repeat Simple_repeat 2 119 0 3 1166 315 0 0 0 chr17 76231106 76231140 -19041511 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 1166 1764 178 48 15 chr17 76231140 76231264 -19041387 + Lx9 LINE L1 7506 7643 -1 3 1166 698 195 97 61 chr17 76232177 76232456 -19040195 + Lx7 LINE L1 7408 7696 0 3 1166 23 54 0 0 chr17 76232565 76232602 -19040049 + AT_rich Low_complexity Low_complexity 1 37 0 3 1166 399 280 39 39 chr17 76232665 76232795 -19039856 + MER3 DNA MER1_type 7 136 -73 3 1166 523 163 117 15 chr17 76233035 76233172 -19039479 + Lx7 LINE L1 7546 7696 0 3 1166 232 225 0 0 chr17 76234132 76234172 -19038479 + C-rich Low_complexity Low_complexity 2 41 0 3 1166 234 128 0 0 chr17 76234645 76234684 -19037967 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1166 303 49 0 0 chr17 76234776 76234817 -19037834 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 3 1166 477 0 0 0 chr17 76234867 76234920 -19037731 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1166 21 0 0 0 chr17 76237092 76237113 -19035538 + AT_rich Low_complexity Low_complexity 1 21 0 3 1166 577 268 16 32 chr17 76237122 76237307 -19035344 - B3A SINE B2 -16 182 1 3 1166 459 289 40 13 chr17 76237434 76237585 -19035066 + ORR1E LTR MaLR 56 210 -149 3 1166 279 0 0 0 chr17 76237730 76237761 -19034890 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1166 395 338 28 44 chr17 76237824 76238254 -19034397 - L1ME3 LINE L1 -252 5910 5488 3 1166 211 363 127 19 chr17 76238415 76238682 -19033969 + L2 LINE L2 2390 2685 -734 3 1166 2442 195 31 30 chr17 76239021 76239529 -19033122 + RLTR17 LTR ERVK 111 619 -73 3 1166 363 273 22 79 chr17 76241038 76241177 -19031474 - RLTR14-int LTR ERV1 -4740 577 447 3 1166 488 289 121 9 chr17 76241638 76242079 -19030572 - L1M4 LINE L1 -2479 3667 3171 3 1166 1268 247 138 3 chr17 76242096 76242445 -19030206 + MTD LTR MaLR 9 404 -15 3 1166 239 296 135 6 chr17 76242459 76242629 -19030022 - L1M4 LINE L1 -2979 3164 2973 3 1166 22 0 0 0 chr17 76242635 76242657 -19029994 + AT_rich Low_complexity Low_complexity 1 22 0 3 1166 1173 74 0 0 chr17 76242696 76242844 -19029807 - B1_Mus1 SINE Alu 0 148 1 3 1166 600 14 0 0 chr17 76242876 76242945 -19029706 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 1166 263 364 107 76 chr17 76242961 76243315 -19029336 - LTR16C LTR ERVL -4 485 121 3 1166 644 256 5 43 chr17 76243501 76243685 -19028966 - Lx LINE L1 -633 6827 6651 4 1166 1608 259 173 41 chr17 76243685 76244244 -19028407 + Lx6 LINE L1 6828 7460 0 4 1166 21 57 0 0 chr17 76244424 76244459 -19028192 + AT_rich Low_complexity Low_complexity 1 35 0 4 1166 575 295 84 42 chr17 76244675 76244879 -19027772 + Lx9 LINE L1 7120 7319 -325 4 1166 378 0 0 0 chr17 76244879 76244921 -19027730 + (TC)n Simple_repeat Simple_repeat 2 43 0 4 1166 575 295 84 42 chr17 76244921 76245218 -19027433 + Lx9 LINE L1 7320 7642 -2 4 1166 758 110 85 0 chr17 76245914 76246032 -19026619 - B1_Mur3 SINE Alu -1 148 21 4 1166 1017 201 36 4 chr17 76246506 76246731 -19025920 - Lx LINE L1 -3 6651 6420 4 1166 14418 97 11 1 chr17 76246731 76249335 -19023316 - L1VL4 LINE L1 -1869 4017 1386 4 1166 4900 68 62 9 chr17 76249361 76250027 -19022624 - L1Md_F2 LINE L1 0 6582 5882 4 1166 4251 77 0 0 chr17 76250027 76250600 -19022051 + L1Md_F2 LINE L1 5310 5882 -1 4 1166 5735 113 16 1 chr17 76250592 76251555 -19021096 - L1VL4 LINE L1 -2510 1404 427 4 1166 1639 181 37 3 chr17 76252093 76252392 -19020259 - RLTR27 LTR ERVK 0 309 1 4 1166 975 266 48 128 chr17 76252809 76253184 -19019467 + MTD LTR MaLR 5 349 -70 4 1166 426 321 136 4 chr17 76254160 76254410 -19018241 + Charlie18a DNA MER1_type 6 288 -54 4 1166 7715 54 0 3 chr17 76254671 76255822 -19016829 - L1Md_F2 LINE L1 0 6582 5436 4 1166 488 203 26 0 chr17 76256692 76256845 -19015806 - Lx9 LINE L1 -1 7643 7487 4 1166 513 199 28 14 chr17 76256932 76257075 -19015576 - Lx4A LINE L1 -4 7054 6910 4 1166 228 35 0 0 chr17 76257082 76257111 -19015540 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1166 278 288 72 56 chr17 76257578 76257703 -19014948 + MLT2D LTR ERVL 165 291 -123 4 1166 236 291 84 48 chr17 76257736 76257819 -19014832 + MLT1J1 LTR MaLR 11 96 -348 4 1166 24 53 0 0 chr17 76258116 76258154 -19014497 + AT_rich Low_complexity Low_complexity 1 38 0 4 1166 22 56 0 0 chr17 76258172 76258208 -19014443 + AT_rich Low_complexity Low_complexity 1 36 0 4 1166 770 88 0 8 chr17 76259351 76259477 -19013174 + (TC)n Simple_repeat Simple_repeat 1 125 0 4 1166 261 0 0 0 chr17 76259477 76259505 -19013146 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 1166 2295 182 10 5 chr17 76259545 76259959 -19012692 + MTC LTR MaLR 6 421 0 4 1166 185 0 40 0 chr17 76260002 76260027 -19012624 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 1166 822 164 11 17 chr17 76260108 76260288 -19012363 + A-rich Low_complexity Low_complexity 1 179 0 4 1166 294 281 135 92 chr17 76260531 76260672 -19011979 + Arthur1B DNA Tip100 1 147 -1078 4 1166 439 58 69 0 chr17 76261775 76261862 -19010789 + (TCTA)n Simple_repeat Simple_repeat 1 93 0 4 1166 302 284 146 0 chr17 76261870 76261970 -19010681 - PB1D10 SINE Alu -5 112 1 4 1166 226 160 40 0 chr17 76261989 76262039 -19010612 - L1MA6 LINE L1 -69 6231 6180 4 1166 675 84 0 0 chr17 76262079 76262174 -19010477 + (TG)n Simple_repeat Simple_repeat 2 96 0 4 1166 295 288 149 4 chr17 76262352 76262593 -19010058 - L1MA4 LINE L1 -57 6243 5968 4 1166 21 0 0 0 chr17 76264848 76264869 -19007782 + AT_rich Low_complexity Low_complexity 1 21 0 4 1166 449 260 170 65 chr17 76264944 76265356 -19007295 - L1M5 LINE L1 -1206 4940 4486 4 1166 569 28 0 0 chr17 76265372 76265444 -19007207 - B1_Mus2 SINE Alu 0 147 76 4 1166 324 295 50 31 chr17 76265444 76265605 -19007046 - L1M5 LINE L1 -1644 4502 4339 4 1166 624 97 0 0 chr17 76266891 76266984 -19005667 + (TG)n Simple_repeat Simple_repeat 2 94 0 4 1166 206 286 0 28 chr17 76267023 76267095 -19005556 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 4 1166 405 0 0 0 chr17 76267132 76267177 -19005474 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1166 233 324 18 54 chr17 76267194 76267305 -19005346 - PB1D10 SINE Alu -2 115 9 4 1166 302 336 23 31 chr17 76267263 76267392 -19005259 - B4A SINE B4 -156 136 9 4 1166 469 355 0 72 chr17 76269096 76269263 -19003388 - B3A SINE B2 -41 157 3 4 1166 27 62 0 0 chr17 76269437 76269485 -19003166 + AT_rich Low_complexity Low_complexity 1 48 0 4 1166 261 160 0 0 chr17 76270910 76270960 -19001691 + (TCTCTG)n Simple_repeat Simple_repeat 5 54 0 4 1166 709 137 23 0 chr17 76270960 76271135 -19001516 + (TCTG)n Simple_repeat Simple_repeat 2 180 0 4 1166 281 64 0 41 chr17 76271154 76271203 -19001448 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 4 1166 363 274 38 30 chr17 76271476 76271633 -19001018 + L1MA9 LINE L1 5816 5974 -209 4 1166 345 222 0 0 chr17 76271695 76271794 -19000857 + (TGG)n Simple_repeat Simple_repeat 3 101 0 4 1166 560 265 89 12 chr17 76271826 76271994 -19000657 - B3 SINE B2 -34 182 2 4 1166 545 272 85 25 chr17 76272387 76272752 -18999899 - L1MEc LINE L1 -5347 1053 667 4 1166 303 303 93 43 chr17 76272896 76273058 -18999593 + MTEa LTR MaLR 206 375 -4 4 1166 2077 359 78 61 chr17 76273089 76274532 -18998119 + ORR1E-int LTR MaLR 64 1530 -50 4 1166 709 353 46 14 chr17 76274532 76274877 -18997774 + ORR1E LTR MaLR 4 359 0 4 1166 282 56 0 0 chr17 76275016 76275052 -18997599 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 1166 545 170 9 0 chr17 76275052 76275164 -18997487 + GA-rich Low_complexity Low_complexity 2 114 0 4 1166 582 41 0 0 chr17 76275199 76275272 -18997379 + (TG)n Simple_repeat Simple_repeat 2 74 0 4 1166 268 331 84 39 chr17 76276723 76276902 -18995749 - MIRb SINE MIR -44 224 38 4 1166 606 28 0 0 chr17 76276907 76276979 -18995672 + (TC)n Simple_repeat Simple_repeat 1 72 0 4 1166 189 107 0 0 chr17 76277272 76277300 -18995351 + (T)n Simple_repeat Simple_repeat 1 28 0 4 1166 596 131 53 8 chr17 76277467 76277598 -18995053 + Lx2A1 LINE L1 6871 7007 -1 4 1166 950 272 72 28 chr17 76277654 76278120 -18994531 + L1MA5 LINE L1 5349 5828 -472 4 1166 405 0 0 0 chr17 76278359 76278404 -18994247 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1166 180 0 0 0 chr17 76278586 76278606 -18994045 + (CTG)n Simple_repeat Simple_repeat 1 20 0 4 1166 239 184 26 26 chr17 76279334 76279412 -18993239 + (TATAA)n Simple_repeat Simple_repeat 2 79 0 4 1166 50 18 0 0 chr17 76279914 76279971 -18992680 + AT_rich Low_complexity Low_complexity 1 57 0 4 1166 294 315 19 70 chr17 76280835 76280983 -18991668 + MLT1E1A LTR MaLR 1 143 -405 4 1166 541 366 95 34 chr17 76281007 76281301 -18991350 + MLT1E1A LTR MaLR 297 608 -72 4 1166 260 262 73 77 chr17 76282193 76282368 -18990283 - RLTR41 LTR ERV1 -50 457 251 4 1166 22 0 0 0 chr17 76283119 76283141 -18989510 + AT_rich Low_complexity Low_complexity 1 22 0 4 1167 188 357 91 0 chr17 76284551 76284694 -18987957 - L2 LINE L2 -943 2476 2321 4 1167 431 18 0 18 chr17 76285061 76285118 -18987533 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 1167 317 302 57 32 chr17 76285213 76285336 -18987315 + MLT1I LTR MaLR 53 178 -233 4 1167 414 315 24 83 chr17 76285593 76285812 -18986839 + MLT2B1 LTR ERVL 296 523 -78 4 1167 441 287 101 62 chr17 76285812 76286020 -18986631 + B4A SINE B4 6 221 -71 4 1167 354 23 0 0 chr17 76286164 76286207 -18986444 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1167 465 103 0 0 chr17 76286698 76286766 -18985885 + (CAA)n Simple_repeat Simple_repeat 2 69 0 4 1167 408 71 0 0 chr17 76287171 76287227 -18985424 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 1167 470 59 0 0 chr17 76288150 76288218 -18984433 - Lx2 LINE L1 -1 6996 6929 4 1167 27 49 0 0 chr17 76288556 76288597 -18984054 + AT_rich Low_complexity Low_complexity 1 41 0 4 1167 416 382 83 36 chr17 76288702 76288893 -18983758 - B4A SINE B4 0 292 95 4 1167 1654 191 100 46 chr17 76288893 76289391 -18983260 + RLTR11A2 LTR ERVK 1 525 -2 4 1167 416 382 83 36 chr17 76289391 76289476 -18983175 - B4A SINE B4 -198 94 3 4 1167 2175 74 17 7 chr17 76290041 76290339 -18982312 + L1_Mus1 LINE L1 6267 6567 0 4 1167 279 263 60 119 chr17 76290435 76290586 -18982065 + MLT1E2 LTR MaLR 410 551 -76 4 1167 405 0 0 0 chr17 76291348 76291393 -18981258 + (TATG)n Simple_repeat Simple_repeat 3 47 0 4 1167 583 322 32 57 chr17 76291472 76291719 -18980932 - B4A SINE B4 -50 242 2 4 1167 475 16 31 0 chr17 76293322 76293386 -18979265 + (TC)n Simple_repeat Simple_repeat 1 66 0 4 1167 645 14 0 0 chr17 76293386 76293459 -18979192 + (CA)n Simple_repeat Simple_repeat 1 74 0 4 1167 238 200 0 22 chr17 76293493 76293539 -18979112 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1167 383 350 7 28 chr17 76293608 76293752 -18978899 - RSINE1 SINE B4 -22 143 3 4 1167 614 299 174 7 chr17 76293897 76294190 -18978461 + MER2 DNA MER2_type 3 344 -1 4 1167 239 338 48 34 chr17 76294651 76294798 -18977853 - MLT1I LTR MaLR -6 405 257 4 1167 250 217 0 0 chr17 76295624 76295670 -18976981 + CT-rich Low_complexity Low_complexity 1 46 0 4 1167 432 158 0 0 chr17 76295674 76295769 -18976882 + (TCCG)n Simple_repeat Simple_repeat 2 96 0 4 1167 245 171 0 0 chr17 76295769 76295810 -18976841 + CT-rich Low_complexity Low_complexity 1 41 0 4 1167 183 129 0 0 chr17 76295853 76295884 -18976767 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1167 2915 122 89 4 chr17 76296276 76296736 -18975915 - L1_Mus4 LINE L1 -7 6647 6149 4 1167 2969 5 5 116 chr17 76296736 76297149 -18975502 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1167 27681 19 1 0 chr17 76297149 76300418 -18972233 - IAPEz-int LTR ERVK 0 6481 3210 4 1167 6459 84 133 73 chr17 76300417 76301649 -18971002 - IAPEz-int LTR ERVK -5168 1313 8 4 1167 2969 5 5 116 chr17 76301649 76302062 -18970589 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1167 3947 109 2 7 chr17 76302062 76302890 -18969761 - L1_Mus4 LINE L1 -482 6154 5337 4 1167 260 300 21 32 chr17 76303063 76303156 -18969495 + MER5B DNA MER1_type 1 92 -86 4 1167 299 130 0 0 chr17 76303457 76303503 -18969148 + MER5B DNA MER1_type 9 54 -124 4 1167 213 283 115 48 chr17 76304202 76304306 -18968345 + PB1D9 SINE Alu 3 113 -7 4 1167 222 37 0 0 chr17 76304738 76304765 -18967886 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1167 759 167 7 59 chr17 76305000 76305153 -18967498 - B1_Mus2 SINE Alu -2 145 1 4 1167 912 323 72 63 chr17 76305428 76305901 -18966750 - Helitron3Na_Mam RC Helitron -7 479 3 4 1167 273 128 0 0 chr17 76306586 76306633 -18966018 + (TCCA)n Simple_repeat Simple_repeat 4 50 0 4 1167 30 0 0 0 chr17 76306735 76306765 -18965886 + AT_rich Low_complexity Low_complexity 1 30 0 4 1167 602 310 0 20 chr17 76306769 76306917 -18965734 - RSINE1 SINE B4 0 165 21 4 1167 766 285 44 18 chr17 76306926 76307151 -18965500 - B4A SINE B4 -61 231 1 4 1167 231 301 138 14 chr17 76307761 76307899 -18964752 + Lx8 LINE L1 7066 7220 -253 5 1167 6750 83 24 9 chr17 76308082 76309075 -18963576 - L1_Mus3 LINE L1 -19 6619 5612 5 1167 398 221 0 29 chr17 76309210 76309350 -18963301 + CT-rich Low_complexity Low_complexity 2 137 0 5 1167 1227 307 46 19 chr17 76311505 76312027 -18960624 - Lx8 LINE L1 -17 7456 6921 5 1167 301 89 0 0 chr17 76313419 76313464 -18959187 - Lx8 LINE L1 -9 7464 7420 5 1167 1046 319 76 22 chr17 76313551 76314129 -18958522 - Lx8 LINE L1 -780 6693 6085 5 1167 27 0 0 0 chr17 76314289 76314316 -18958335 + AT_rich Low_complexity Low_complexity 1 27 0 5 1167 185 273 29 29 chr17 76314569 76314637 -18958014 - MIRb SINE MIR -86 182 115 5 1167 426 39 0 0 chr17 76316386 76316438 -18956213 + (TAA)n Simple_repeat Simple_repeat 2 53 0 5 1167 302 265 4 8 chr17 76316752 76316895 -18955756 - L1M4 LINE L1 -660 5514 5373 5 1167 223 299 51 112 chr17 76317363 76317461 -18955190 - B1F1 SINE Alu -52 97 6 5 1167 3570 136 23 12 chr17 76317482 76318056 -18954595 - Lx2 LINE L1 -1 6996 6417 5 1167 518 217 92 46 chr17 76318073 76318247 -18954404 + Lx9 LINE L1 7328 7509 -135 5 1167 1211 72 6 0 chr17 76318252 76318419 -18954232 + (TCTA)n Simple_repeat Simple_repeat 2 169 0 5 1167 195 356 11 22 chr17 76318739 76318828 -18953823 + MIR SINE MIR 34 121 -141 5 1167 253 354 0 0 chr17 76319204 76319283 -18953368 + (CA)n Simple_repeat Simple_repeat 2 80 0 5 1167 22 70 0 0 chr17 76320837 76320880 -18951771 + AT_rich Low_complexity Low_complexity 1 43 0 5 1167 1947 36 4 4 chr17 76321183 76321431 -18951220 - L1Md_F2 LINE L1 -409 6173 5926 5 1167 3615 22 0 7 chr17 76321433 76321851 -18950800 + L1Md_F2 LINE L1 6154 6568 -14 5 1167 515 305 16 48 chr17 76321875 76322061 -18950590 + B3A SINE B2 18 197 -1 5 1167 257 268 0 0 chr17 76322198 76322254 -18950397 + CT-rich Low_complexity Low_complexity 1 56 0 5 1167 7941 33 0 0 chr17 76322440 76323493 -18949158 - L1Md_A LINE L1 0 6582 5530 5 1167 8597 4 0 0 chr17 76323561 76324607 -18948044 - L1Md_A LINE L1 0 6582 5537 5 1167 1224 120 92 5 chr17 76325257 76325475 -18947176 - Lx LINE L1 -1 6653 6417 5 1167 4937 24 9 0 chr17 76325543 76326121 -18946530 - L1Md_A LINE L1 -1 6581 5999 5 1167 5128 60 16 0 chr17 76326155 76326801 -18945850 + L1_Mus2 LINE L1 5909 6564 -2 5 1167 1222 338 60 17 chr17 76326876 76327625 -18945026 - Lx8 LINE L1 -30 7443 6663 5 1167 528 306 0 7 chr17 76327909 76328057 -18944594 - RSINE1 SINE B4 -15 150 4 5 1167 25 0 0 0 chr17 76328510 76328535 -18944116 + AT_rich Low_complexity Low_complexity 1 25 0 5 1167 243 0 0 0 chr17 76329116 76329143 -18943508 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1167 811 263 11 32 chr17 76329194 76329379 -18943272 + B3A SINE B2 2 182 -16 5 1167 212 122 0 47 chr17 76329790 76329833 -18942818 + GA-rich Low_complexity Low_complexity 2 42 0 5 1167 273 327 132 77 chr17 76330069 76330103 -18942548 + LTR41B LTR ERVL 5 36 -732 5 1167 2594 35 0 6 chr17 76330103 76330423 -18942228 - L1Md_F3 LINE L1 -1 6583 6266 5 1167 278 327 132 77 chr17 76330423 76330570 -18942081 + LTR41B LTR ERVL 37 196 -572 5 1167 1044 62 35 0 chr17 76330852 76330997 -18941654 - URR1A DNA MER1_type 0 226 77 5 1167 3438 58 7 0 chr17 76331508 76331942 -18940709 - L1Md_F2 LINE L1 -12 6570 6134 5 1167 262 330 66 0 chr17 76332001 76332092 -18940559 - MER58A DNA MER1_type -127 97 1 5 1167 284 356 0 0 chr17 76332825 76332915 -18939736 + L2 LINE L2 2788 2877 -542 5 1167 363 289 69 11 chr17 76333002 76333177 -18939474 - MER53 DNA hAT -5 188 4 5 1167 239 300 11 0 chr17 76333773 76333863 -18938788 + L1MA6 LINE L1 6038 6128 -172 5 1167 34 24 0 0 chr17 76334730 76334771 -18937880 + AT_rich Low_complexity Low_complexity 1 41 0 5 1167 349 261 98 33 chr17 76336728 76337111 -18935540 + L1MA8 LINE L1 5713 6136 -155 5 1167 34092 49 1 16 chr17 76337115 76342316 -18930335 + L1Md_F LINE L1 466 5586 -297 5 1167 8467 31 1 0 chr17 76342316 76343310 -18929341 + L1Md_A LINE L1 5587 6581 -1 5 1167 435 368 134 12 chr17 76343529 76343782 -18928869 + Zaphod DNA Tip100 98 381 -3650 5 1167 396 330 46 0 chr17 76344552 76344749 -18927902 - MER5C DNA MER1_type -64 249 44 5 1167 749 58 10 0 chr17 76344938 76345041 -18927610 + (TCTA)n Simple_repeat Simple_repeat 1 104 0 5 1167 189 0 0 0 chr17 76345055 76345076 -18927575 + (GA)n Simple_repeat Simple_repeat 2 22 0 5 1167 186 315 132 22 chr17 76346358 76346449 -18926202 - MIRc SINE MIR -118 150 50 5 1167 221 164 0 110 chr17 76346994 76347046 -18925605 + T-rich Low_complexity Low_complexity 32 77 0 5 1167 1105 102 7 0 chr17 76347046 76347193 -18925458 - B1_Mus1 SINE Alu 0 148 1 5 1167 221 164 0 110 chr17 76347193 76347222 -18925429 + T-rich Low_complexity Low_complexity 5 31 0 5 1167 4292 152 13 103 chr17 76347431 76348298 -18924353 - RMER21B LTR ERV1 -53 789 1 5 1167 254 263 0 0 chr17 76348299 76348356 -18924295 - Lx8 LINE L1 -1070 6403 6347 5 1167 400 304 4 22 chr17 76349386 76349521 -18923130 + PB1D10 SINE Alu 9 136 -14 5 1167 367 288 85 30 chr17 76349999 76350164 -18922487 + MER53 DNA hAT 7 180 -13 5 1167 270 0 0 0 chr17 76350299 76350329 -18922322 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 1167 854 299 23 49 chr17 76350988 76351252 -18921399 - B4A SINE B4 -9 283 27 5 1167 306 286 93 19 chr17 76351254 76351361 -18921290 + RMER12 LTR ERVK 747 861 -461 5 1167 991 241 223 0 chr17 76351411 76351676 -18920975 - MTE2b LTR MaLR -52 327 4 5 1167 306 0 0 0 chr17 76352157 76352191 -18920460 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 5 1167 23 0 0 0 chr17 76352304 76352327 -18920324 + AT_rich Low_complexity Low_complexity 1 23 0 5 1167 11755 102 29 28 chr17 76352329 76353120 -18919531 - L1VL2 LINE L1 -632 2983 2166 5 1167 4542 82 10 2 chr17 76353120 76353732 -18918919 + L1_Mus2 LINE L1 5950 6566 0 5 1167 11755 97 28 18 chr17 76353732 76355597 -18917054 - L1VL2 LINE L1 -1450 2165 307 5 1167 805 177 57 6 chr17 76355807 76355983 -18916668 + Lx9 LINE L1 7285 7469 -175 5 1167 301 288 108 17 chr17 76356091 76356211 -18916440 + ID_B1 SINE B4 91 221 -3 5 1167 564 267 12 96 chr17 76357399 76357743 -18914908 - L1MB8 LINE L1 -9 6169 5855 5 1167 322 240 380 45 chr17 76357809 76357993 -18914658 - RMER1B Other Other -776 290 46 5 1167 944 299 48 35 chr17 76358044 76358523 -18914128 - L1MA4 LINE L1 -368 5932 5448 5 1167 229 267 74 16 chr17 76358523 76358645 -18914006 + L1M5 LINE L1 3783 3911 -2235 5 1167 299 325 62 45 chr17 76358690 76358980 -18913671 + L1M2 LINE L1 4923 5217 -926 5 1167 354 98 0 0 chr17 76358996 76359047 -18913604 + MT2A LTR ERVL 1 51 -482 5 1167 287 324 83 0 chr17 76359396 76359504 -18913147 + Cheshire DNA MER1_type 174 290 -2130 5 1167 235 364 68 78 chr17 76359518 76359964 -18912687 + L2 LINE L2 2532 2968 -451 5 1167 891 53 0 0 chr17 76359964 76360077 -18912574 + (TTTC)n Simple_repeat Simple_repeat 4 116 0 5 1167 235 364 68 78 chr17 76360077 76360170 -18912481 + L2 LINE L2 2969 3066 -353 5 1167 243 146 0 0 chr17 76360175 76360230 -18912421 + (TTCC)n Simple_repeat Simple_repeat 4 58 0 5 1167 674 284 28 37 chr17 76361586 76361765 -18910886 + B3 SINE B2 3 179 -37 5 1167 582 54 0 0 chr17 76361765 76361839 -18910812 + (CA)n Simple_repeat Simple_repeat 2 75 0 5 1167 674 284 28 37 chr17 76361839 76361875 -18910776 + B3 SINE B2 180 216 0 5 1167 524 348 12 50 chr17 76363401 76363643 -18909008 - LTR16A LTR ERVL 0 451 219 5 1167 464 347 49 58 chr17 76363863 76364294 -18908357 - L2 LINE L2 -797 2622 2196 5 1167 190 337 48 38 chr17 76364409 76364514 -18908137 - MIR SINE MIR -37 225 120 5 1167 376 284 89 19 chr17 76364534 76364692 -18907959 + MLT1A0 LTR MaLR 1 169 -196 5 1167 2974 171 85 60 chr17 76364961 76365253 -18907398 + RMER6C LTR ERVK 1 287 -403 5 1167 1143 82 0 0 chr17 76365253 76365399 -18907252 + B1_Mm SINE Alu 2 147 0 5 1167 2974 171 85 60 chr17 76365399 76365777 -18906874 + RMER6C LTR ERVK 288 688 -2 5 1167 353 357 124 81 chr17 76365920 76365999 -18906652 + LTR50 LTR ERVL 1 90 -705 5 1167 4810 13 0 4 chr17 76365999 76366545 -18906106 + L1Md_T LINE L1 6039 6582 0 5 1167 353 348 132 58 chr17 76366545 76366940 -18905711 + LTR50 LTR ERVL 91 586 -209 5 1167 248 354 0 0 chr17 76367109 76367191 -18905460 + ID4_ SINE ID 1 82 -1 5 1167 584 158 0 9 chr17 76367193 76367308 -18905343 + GA-rich Low_complexity Low_complexity 3 116 0 5 1167 725 271 64 45 chr17 76367361 76367628 -18905023 - MLT1E1A LTR MaLR -333 347 76 5 1167 5198 129 23 57 chr17 76367657 76368689 -18903962 + L1VL2 LINE L1 73 1063 -2552 5 1167 3749 36 0 2 chr17 76368689 76369137 -18903514 + L1Md_T LINE L1 6135 6581 -1 5 1167 5198 90 32 19 chr17 76369137 76369191 -18903460 + L1VL2 LINE L1 1064 1111 -2504 5 1167 318 26 0 0 chr17 76369191 76369230 -18903421 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1167 5198 90 32 19 chr17 76369230 76369926 -18902725 + L1VL2 LINE L1 1112 1825 -1790 5 1167 352 292 0 0 chr17 76370071 76370160 -18902491 - PB1D10 SINE Alu -2 115 27 5 1167 225 0 0 0 chr17 76370804 76370829 -18901822 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 5 1167 30 0 0 0 chr17 76371582 76371612 -18901039 + AT_rich Low_complexity Low_complexity 1 30 0 5 1167 4911 52 2 5 chr17 76372614 76373228 -18899423 + L1Md_F2 LINE L1 5971 6582 0 5 1167 23 33 0 0 chr17 76373583 76373613 -18899038 + AT_rich Low_complexity Low_complexity 1 30 0 5 1167 633 231 72 44 chr17 76374013 76374288 -18898363 - URR1B DNA MER1_type 0 225 7 5 1167 1003 107 0 40 chr17 76374319 76374494 -18898157 + Lx2 LINE L1 6830 6997 0 5 1167 1752 177 7 3 chr17 76374646 76374947 -18897704 + RMER6D LTR ERVK 1 302 -418 5 1167 1571 152 89 16 chr17 76374914 76375228 -18897423 + RMER16 LTR ERVK 112 448 -85 5 1167 309 115 12 25 chr17 76375228 76375308 -18897343 + A-rich Low_complexity Low_complexity 2 80 0 5 1167 1874 221 34 19 chr17 76375339 76375754 -18896897 + RMER6D LTR ERVK 300 720 0 5 1167 1788 159 44 51 chr17 76375794 76376206 -18896445 - RMER17C LTR ERVK -1 409 1 6 1167 420 315 36 36 chr17 76377550 76377859 -18894792 - L1MC5 LINE L1 -554 7407 7099 6 1167 493 312 64 19 chr17 76378221 76378378 -18894273 - B3A SINE B2 -33 165 2 6 1167 750 230 5 43 chr17 76378422 76378608 -18894043 + MTD LTR MaLR 236 414 -5 6 1167 678 281 85 26 chr17 76378613 76378970 -18893681 + MTD-int LTR MaLR 1 400 -698 6 1167 4521 143 12 41 chr17 76378977 76379751 -18892900 + Lx4A LINE L1 6308 7058 0 6 1167 844 238 89 5 chr17 76379773 76379976 -18892675 + MTD LTR MaLR 200 419 0 6 1167 525 324 72 96 chr17 76380243 76380540 -18892111 - L1MC1 LINE L1 -1 6332 6005 6 1167 662 178 96 7 chr17 76380540 76380676 -18891975 - B1_Mur2 SINE Alu -1 148 1 6 1167 525 324 72 96 chr17 76380676 76381014 -18891637 - L1MC1 LINE L1 -329 6004 5712 6 1167 1046 242 8 8 chr17 76381183 76381425 -18891226 + Lx4B LINE L1 6571 6812 -246 6 1167 239 250 133 89 chr17 76381418 76381576 -18891075 + Lx5 LINE L1 6884 7048 -2 6 1167 1228 227 97 0 chr17 76381613 76381891 -18890760 + ORR1D1 LTR MaLR 1 305 -69 6 1167 320 250 47 0 chr17 76381881 76381945 -18890706 - B4A SINE B4 -225 67 1 6 1167 245 282 45 72 chr17 76382079 76382190 -18890461 + MLT1H LTR MaLR 62 169 -380 6 1167 433 309 79 62 chr17 76382685 76383268 -18889383 - L1ME1 LINE L1 -150 6029 5437 6 1167 243 217 0 0 chr17 76383307 76383367 -18889284 + (TATG)n Simple_repeat Simple_repeat 1 60 0 6 1167 813 289 30 70 chr17 76383368 76383669 -18888982 - B4 SINE B4 -2 290 2 6 1167 2727 258 32 6 chr17 76383714 76384425 -18888226 - Lx6 LINE L1 -4 7456 6744 6 1167 1244 75 6 0 chr17 76384425 76384598 -18888053 + (TTTC)n Simple_repeat Simple_repeat 1 174 0 6 1167 1178 268 38 46 chr17 76384598 76384940 -18887711 - Lx6 LINE L1 -946 6750 6456 6 1167 305 261 96 73 chr17 76385332 76385510 -18887141 - L1MC4 LINE L1 -3936 2279 2098 6 1167 439 211 367 0 chr17 76386537 76386684 -18885967 - URR1A DNA MER1_type -24 202 2 6 1167 2944 150 4 0 chr17 76387087 76387559 -18885092 - Lx2 LINE L1 -8 6989 6516 6 1167 4171 84 0 16 chr17 76387842 76388412 -18884239 - L1_Mus1 LINE L1 0 6567 6007 6 1167 5382 179 38 22 chr17 76388412 76390204 -18882447 - L1Md_F LINE L1 -3810 2073 244 6 1167 265 286 86 0 chr17 76390511 76390581 -18882070 - LTR40a LTR ERVL -167 352 277 6 1167 300 70 0 0 chr17 76390590 76390633 -18882018 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 6 1167 228 119 24 0 chr17 76390943 76390985 -18881666 - L1MA8 LINE L1 -225 6066 6024 6 1167 242 328 34 17 chr17 76391409 76391527 -18881124 - MLT1A0 LTR MaLR -31 334 215 6 1167 227 264 167 67 chr17 76391670 76391820 -18880831 + MER5A1 DNA MER1_type 2 166 0 6 1167 959 272 47 103 chr17 76393052 76393534 -18879117 + MT2B LTR ERVL 1 537 -64 6 1167 513 0 0 0 chr17 76393538 76393595 -18879056 + (TCTA)n Simple_repeat Simple_repeat 1 57 0 6 1167 191 254 16 16 chr17 76393943 76394007 -18878644 - L4 LINE RTE -523 1506 1443 6 1167 3153 57 0 126 chr17 76397223 76397722 -18874929 - RLTR10C LTR ERVK 0 436 1 6 1167 199 286 0 45 chr17 76398574 76398640 -18874011 - L3 LINE CR1 -1629 2860 2798 6 1167 761 244 94 20 chr17 76399790 76399968 -18872683 + B3 SINE B2 1 195 -21 6 1167 396 0 0 0 chr17 76399968 76400012 -18872639 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1167 279 0 0 0 chr17 76400012 76400042 -18872609 + (GA)n Simple_repeat Simple_repeat 2 32 0 6 1167 761 244 94 20 chr17 76400042 76400063 -18872588 + B3 SINE B2 196 215 -1 6 1167 443 242 1 50 chr17 76400322 76400446 -18872205 - RLTR43A LTR ERVK 0 375 249 6 1167 658 48 58 0 chr17 76400446 76400549 -18872102 + L1Md_T LINE L1 6473 6581 -1 6 1167 283 268 49 67 chr17 76400549 76400588 -18872063 - RLTR43A LTR ERVK -116 259 215 6 1167 390 317 0 46 chr17 76401060 76401169 -18871482 + RSINE1 SINE B4 50 153 -12 6 1167 675 154 0 0 chr17 76401896 76402013 -18870638 + CT-rich Low_complexity Low_complexity 2 118 0 6 1167 1129 101 11 6 chr17 76403183 76403362 -18869289 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 1167 333 0 0 0 chr17 76403362 76403399 -18869252 + (TC)n Simple_repeat Simple_repeat 2 38 0 6 1167 192 97 0 0 chr17 76403572 76403603 -18869048 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 6 1167 310 325 122 0 chr17 76403674 76403797 -18868854 - B4 SINE B4 -146 146 9 6 1167 378 147 0 0 chr17 76405758 76405826 -18866825 + (GGGA)n Simple_repeat Simple_repeat 2 69 0 6 1167 21 0 0 0 chr17 76406656 76406677 -18865974 + AT_rich Low_complexity Low_complexity 1 21 0 6 1167 486 0 0 0 chr17 76406689 76406743 -18865908 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 6 1167 460 226 0 15 chr17 76406744 76406879 -18865772 - Lx9 LINE L1 -25 7619 7487 6 1167 235 380 90 0 chr17 76406879 76406979 -18865672 - B4A SINE B4 -65 227 119 6 1167 2040 190 98 32 chr17 76407727 76408227 -18864424 - RMER16 LTR ERVK 0 533 1 6 1167 318 50 0 0 chr17 76408441 76408481 -18864170 + (TA)n Simple_repeat Simple_repeat 1 40 0 6 1167 402 21 0 0 chr17 76408481 76408527 -18864124 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 1167 615 278 20 59 chr17 76408699 76408902 -18863749 + B3A SINE B2 1 195 -3 6 1167 3020 124 0 0 chr17 76409130 76409564 -18863087 + RLTR10C LTR ERVK 1 434 -2 6 1167 3635 156 7 7 chr17 76409765 76410534 -18862117 - Lx5 LINE L1 -1096 5954 5181 6 1167 650 156 74 0 chr17 76410537 76410672 -18861979 + Lx5 LINE L1 6898 7042 -8 6 1167 287 317 0 24 chr17 76410885 76410969 -18861682 + polypyrimidine Low_complexity Low_complexity 3 84 0 6 1167 360 143 0 0 chr17 76410997 76411067 -18861584 + (TC)n Simple_repeat Simple_repeat 1 70 0 6 1167 189 0 0 0 chr17 76411067 76411088 -18861563 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1167 734 273 0 0 chr17 76411090 76411244 -18861407 - RSINE1 SINE B4 -10 155 2 6 1167 3627 131 44 74 chr17 76413258 76413945 -18858706 + Lx2A LINE L1 6342 7007 -1 6 1167 197 65 0 31 chr17 76414750 76414782 -18857869 + (TCC)n Simple_repeat Simple_repeat 3 33 0 6 1167 546 271 113 0 chr17 76414796 76414929 -18857722 - B1_Mur2 SINE Alu -1 148 1 6 1168 206 32 32 0 chr17 76414984 76415015 -18857636 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 6 1168 1584 100 8 16 chr17 76415015 76415253 -18857398 - Lx3A LINE L1 -14 6967 6732 6 1168 21 71 0 0 chr17 76415924 76415966 -18856685 + AT_rich Low_complexity Low_complexity 1 42 0 6 1168 31 0 0 0 chr17 76417153 76417184 -18855467 + AT_rich Low_complexity Low_complexity 1 31 0 6 1168 423 0 0 0 chr17 76417913 76417960 -18854691 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1168 1511 134 0 0 chr17 76418254 76418492 -18854159 + Lx3C LINE L1 5612 5849 -1127 6 1168 29740 99 28 36 chr17 76418581 76424988 -18847663 - L1_Mus2 LINE L1 -6 6560 193 6 1168 209 273 0 19 chr17 76425258 76425319 -18847332 - MIRb SINE MIR -42 220 161 6 1168 632 264 0 0 chr17 76425951 76426091 -18846560 + B1_Mur2 SINE Alu 1 140 -9 6 1168 492 72 0 0 chr17 76426091 76426160 -18846491 + (CA)n Simple_repeat Simple_repeat 2 70 0 6 1168 257 187 13 0 chr17 76426160 76426235 -18846416 + GA-rich Low_complexity Low_complexity 1 76 0 6 1168 272 308 0 0 chr17 76427552 76427617 -18845034 - B3A SINE B2 -116 82 18 6 1168 876 178 0 0 chr17 76427676 76427856 -18844795 + CT-rich Low_complexity Low_complexity 1 180 0 6 1168 1194 240 80 47 chr17 76427888 76428251 -18844400 - Lx LINE L1 -26 7434 7060 6 1168 837 316 104 12 chr17 76428647 76428983 -18843668 - MTE2b LTR MaLR -12 367 1 6 1168 293 358 72 41 chr17 76428983 76429178 -18843473 - MTE2b-int LTR MaLR 0 1580 1380 6 1168 557 114 0 0 chr17 76429191 76429270 -18843381 + RMER1C Other Other 1115 1193 -149 6 1168 1650 98 0 4 chr17 76429271 76429507 -18843144 - L1_Mus3 LINE L1 -252 6386 6152 6 1168 1625 58 76 0 chr17 76429507 76429732 -18842919 + L1_Mus3 LINE L1 6381 6622 -16 6 1168 23 33 0 0 chr17 76429737 76429767 -18842884 + AT_rich Low_complexity Low_complexity 1 30 0 6 1168 435 191 73 0 chr17 76429770 76429880 -18842771 + RMER1C Other Other 1217 1334 -8 6 1168 531 295 86 13 chr17 76429925 76430076 -18842575 + B3 SINE B2 1 162 -54 6 1168 423 0 0 0 chr17 76430078 76430125 -18842526 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1168 389 303 122 14 chr17 76430150 76430297 -18842354 - B3A SINE B2 0 198 36 6 1168 201 213 21 0 chr17 76430331 76430378 -18842273 + CT-rich Low_complexity Low_complexity 1 48 0 6 1168 602 50 30 10 chr17 76430409 76430509 -18842142 + (TCTA)n Simple_repeat Simple_repeat 1 102 0 6 1168 2693 145 2 22 chr17 76430511 76430970 -18841681 - RLTR11B LTR ERVK -2 451 2 6 1168 680 92 33 39 chr17 76430970 76431150 -18841501 + (TCTA)n Simple_repeat Simple_repeat 1 179 0 6 1168 698 62 81 6 chr17 76431191 76431352 -18841299 + (TCTA)n Simple_repeat Simple_repeat 3 175 0 6 1168 32 43 0 0 chr17 76432119 76432165 -18840486 + AT_rich Low_complexity Low_complexity 1 46 0 6 1168 261 339 55 0 chr17 76432233 76432342 -18840309 + MIR SINE MIR 30 144 -64 6 1168 1470 191 17 7 chr17 76432362 76432658 -18839993 - Lx LINE L1 -2 6652 6354 6 1168 655 110 0 0 chr17 76432658 76432758 -18839893 + Lx LINE L1 6153 6252 -402 6 1168 864 134 105 21 chr17 76432761 76432951 -18839700 + Lx LINE L1 6195 6400 -254 6 1168 237 186 17 17 chr17 76433399 76433459 -18839192 + (CATATA)n Simple_repeat Simple_repeat 6 65 0 6 1168 22 56 0 0 chr17 76433767 76433803 -18838848 + AT_rich Low_complexity Low_complexity 1 36 0 6 1168 1339 152 0 35 chr17 76434106 76434338 -18838313 + L1VL2 LINE L1 177 400 -5935 6 1168 552 68 0 0 chr17 76434400 76434473 -18838178 + (TC)n Simple_repeat Simple_repeat 2 74 0 6 1168 387 0 0 0 chr17 76434473 76434515 -18838136 + (TTCC)n Simple_repeat Simple_repeat 2 44 0 6 1168 553 49 12 12 chr17 76434564 76434646 -18838005 + (TCTA)n Simple_repeat Simple_repeat 1 82 0 6 1168 1046 145 0 0 chr17 76434648 76434807 -18837844 - RLTR11B LTR ERVK -2 451 293 6 1168 11872 100 45 12 chr17 76434814 76437071 -18835580 + L1VL2 LINE L1 660 2991 -624 6 1168 1906 105 28 22 chr17 76437249 76437569 -18835082 - RLTRETN_Mm LTR ERVK 0 322 1 6 1168 17613 68 9 17 chr17 76437569 76439945 -18832706 - ETnERV2-int LTR ERVK -204 7202 5106 6 1168 3294 82 4 41 chr17 76439945 76440438 -18832213 - IAPLTR2_Mm LTR ERVK 0 475 1 7 1168 17613 178 28 26 chr17 76440438 76444880 -18827771 - ETnERV2-int LTR ERVK -2301 5105 1 6 1168 1953 99 28 22 chr17 76444880 76445200 -18827451 - RLTRETN_Mm LTR ERVK 0 322 1 6 1168 22 80 0 0 chr17 76445569 76445619 -18827032 + AT_rich Low_complexity Low_complexity 1 50 0 7 1168 22 70 0 0 chr17 76446160 76446203 -18826448 + AT_rich Low_complexity Low_complexity 1 43 0 7 1168 325 260 27 0 chr17 76446376 76446449 -18826202 - ID4 SINE ID -3 80 6 7 1168 772 199 6 125 chr17 76447251 76447524 -18825127 + ORR1D1 LTR MaLR 3 238 -140 7 1168 636 257 0 74 chr17 76447537 76447550 -18825101 + ORR1D1 LTR MaLR 174 184 -200 7 1168 306 0 0 0 chr17 76447550 76447584 -18825067 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 1168 636 257 0 74 chr17 76447584 76447759 -18824892 + ORR1D1 LTR MaLR 185 348 -36 7 1168 31431 92 21 7 chr17 76447831 76454006 -18818645 - L1Md_F2 LINE L1 -3 6579 319 7 1168 2910 92 3 0 chr17 76454108 76454498 -18818153 + L1_Mus1 LINE L1 6171 6561 -6 7 1168 1089 285 38 32 chr17 76454635 76455142 -18817509 - Lx9 LINE L1 -15 7629 7120 7 1168 5424 148 50 16 chr17 76455246 76456201 -18816450 + Lx4B LINE L1 6055 7042 -16 7 1168 213 94 0 0 chr17 76456201 76456233 -18816418 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 7 1168 438 304 92 77 chr17 76456268 76456475 -18816176 + ID_B1 SINE B4 2 211 -13 7 1168 383 267 127 16 chr17 76456624 76456815 -18815836 - MER33 DNA MER1_type -139 185 7 7 1168 207 0 0 0 chr17 76457712 76457735 -18814916 + (A)n Simple_repeat Simple_repeat 1 23 0 7 1168 272 284 0 0 chr17 76457789 76457856 -18814795 - L1MC1 LINE L1 -19 6314 6248 7 1168 452 311 74 0 chr17 76459053 76459201 -18813450 - MER5A DNA MER1_type -28 161 3 7 1168 678 271 218 16 chr17 76459836 76460144 -18812507 + ORR1D2 LTR MaLR 1 370 0 7 1168 300 70 0 0 chr17 76460451 76460494 -18812157 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 1168 239 172 146 15 chr17 76461077 76461207 -18811444 - RMER17A LTR ERVK -265 486 340 7 1168 272 354 0 0 chr17 76461286 76461365 -18811286 - MTE2b LTR MaLR -300 79 1 7 1168 257 109 22 0 chr17 76463265 76463311 -18809340 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1168 477 0 0 0 chr17 76464102 76464155 -18808496 + (TC)n Simple_repeat Simple_repeat 1 53 0 7 1168 375 78 0 0 chr17 76464385 76464436 -18808215 + (TCC)n Simple_repeat Simple_repeat 1 51 0 7 1168 247 146 109 0 chr17 76464801 76464856 -18807795 - MLT1J2 LTR MaLR -387 61 1 7 1168 523 274 122 17 chr17 76465387 76465617 -18807034 - Lx8 LINE L1 -5 7468 7215 7 1168 1924 121 57 9 chr17 76465633 76465822 -18806829 - RLTR44A LTR ERVK -2 403 207 7 1168 387 0 0 0 chr17 76465822 76465865 -18806786 + (CA)n Simple_repeat Simple_repeat 1 43 0 7 1168 1924 121 57 9 chr17 76465865 76466008 -18806643 - RLTR44A LTR ERVK -199 206 57 7 1168 315 329 6 47 chr17 76466031 76466200 -18806451 - Lx8 LINE L1 -265 7208 7047 7 1168 522 0 0 0 chr17 76466263 76466321 -18806330 + (TC)n Simple_repeat Simple_repeat 1 58 0 7 1168 264 100 0 0 chr17 76466321 76466361 -18806290 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 1168 293 294 24 48 chr17 76466393 76466518 -18806133 - Lx8 LINE L1 -580 6893 6772 7 1168 326 255 144 19 chr17 76466689 76466849 -18805802 - Lx8 LINE L1 -1198 6275 6096 7 1168 555 278 99 7 chr17 76466870 76467153 -18805498 - Lx8 LINE L1 0 5847 5539 7 1168 1068 317 48 6 chr17 76467149 76467673 -18804978 + L1_Mur3 LINE L1 4696 5241 -639 7 1168 34278 37 4 7 chr17 76467676 76472805 -18799846 + L1Md_T LINE L1 483 5586 -297 7 1168 8388 35 1 0 chr17 76472805 76473800 -18798851 + L1Md_T LINE L1 5587 6582 0 7 1168 616 139 10 19 chr17 76473885 76473988 -18798663 + U6 snRNA snRNA 1 102 -5 7 1168 243 0 0 0 chr17 76473991 76474018 -18798633 + (GA)n Simple_repeat Simple_repeat 1 27 0 7 1168 1987 261 25 11 chr17 76474102 76474633 -18798018 - Lx6 LINE L1 -11 7449 6912 7 1168 342 67 0 0 chr17 76475039 76475084 -18797567 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 1168 2086 159 55 47 chr17 76475197 76475445 -18797206 + L1VL4 LINE L1 854 1107 -5550 7 1168 2041 107 63 0 chr17 76475445 76475764 -18796887 + L1_Mus3 LINE L1 6293 6631 -7 7 1168 12335 170 36 19 chr17 76475764 76478579 -18794072 + L1VL4 LINE L1 1108 3972 -1914 7 1168 4215 104 11 8 chr17 76478579 76479217 -18793434 + Lx2A LINE L1 6368 7007 -1 7 1168 262 250 0 82 chr17 76479278 76479339 -18793312 + B4A SINE B4 230 285 -7 7 1168 21 71 0 0 chr17 76479386 76479428 -18793223 + AT_rich Low_complexity Low_complexity 1 42 0 7 1168 845 37 9 0 chr17 76479442 76479551 -18793100 + (GA)n Simple_repeat Simple_repeat 1 110 0 7 1168 22 0 0 0 chr17 76480216 76480238 -18792413 + AT_rich Low_complexity Low_complexity 1 22 0 7 1168 325 301 36 84 chr17 76480505 76480755 -18791896 + L1MEb LINE L1 374 611 -5483 7 1168 245 346 22 6 chr17 76480818 76481001 -18791650 + L1MEb LINE L1 699 884 -5316 7 1168 946 205 275 25 chr17 76481102 76481419 -18791232 + Lx5 LINE L1 6666 7154 -306 7 1168 250 250 79 10 chr17 76481545 76481646 -18791005 - L1MA9 LINE L1 -70 6242 6135 7 1168 23 33 0 0 chr17 76481657 76481687 -18790964 + AT_rich Low_complexity Low_complexity 1 30 0 7 1168 364 300 0 32 chr17 76482098 76482191 -18790460 + B3A SINE B2 52 141 -57 7 1168 443 173 9 0 chr17 76482230 76482340 -18790311 + GA-rich Low_complexity Low_complexity 2 112 0 7 1168 640 301 23 56 chr17 76482384 76482778 -18789873 - L1MA5 LINE L1 -95 6205 5825 7 1168 328 290 154 5 chr17 76482845 76483053 -18789598 - L1MA5 LINE L1 -659 5641 5403 7 1168 766 232 135 63 chr17 76483160 76483539 -18789112 + RLTR20D LTR ERVK 2 467 -101 7 1168 402 79 0 0 chr17 76483539 76483602 -18789049 + (TG)n Simple_repeat Simple_repeat 2 64 0 7 1168 766 258 45 54 chr17 76483602 76483700 -18788951 + RLTR20D LTR ERVK 468 567 -1 7 1168 292 275 11 0 chr17 76483702 76483793 -18788858 + L1M2 LINE L1 5208 5299 -844 7 1168 649 168 107 0 chr17 76483902 76484033 -18788618 + B1_Mus1 SINE Alu 3 147 -1 7 1168 255 130 0 0 chr17 76484301 76484355 -18788296 + (A)n Simple_repeat Simple_repeat 1 54 0 7 1168 3192 56 5 2 chr17 76484424 76484819 -18787832 - MTA_Mm LTR MaLR 0 396 1 7 1168 4888 106 32 17 chr17 76484819 76485659 -18786992 - MTA_Mm-int LTR MaLR 0 1258 377 7 1168 1031 118 0 0 chr17 76485659 76485803 -18786848 - B1_Mus1 SINE Alu -2 146 3 7 1168 3533 194 110 88 chr17 76485803 76486194 -18786457 - MTA_Mm-int LTR MaLR -863 395 2 7 1168 2351 56 83 19 chr17 76486194 76486519 -18786132 - MTA_Mm LTR MaLR 0 346 1 7 1168 25 0 0 0 chr17 76486909 76486934 -18785717 + AT_rich Low_complexity Low_complexity 1 25 0 7 1168 572 52 31 20 chr17 76487160 76487258 -18785393 + (TCTA)n Simple_repeat Simple_repeat 1 99 0 7 1168 245 175 0 31 chr17 76487293 76487358 -18785293 + (TATG)n Simple_repeat Simple_repeat 2 64 0 7 1168 194 91 30 0 chr17 76487405 76487438 -18785213 + (TATG)n Simple_repeat Simple_repeat 2 35 0 7 1168 279 203 68 0 chr17 76487438 76487512 -18785139 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 7 1168 444 37 0 0 chr17 76488869 76488923 -18783728 + (CA)n Simple_repeat Simple_repeat 2 55 0 7 1168 24 0 0 0 chr17 76489548 76489572 -18783079 + AT_rich Low_complexity Low_complexity 1 24 0 7 1168 227 312 113 10 chr17 76489725 76489822 -18782829 - PB1D10 SINE Alu -10 107 1 7 1168 274 358 73 24 chr17 76491527 76491650 -18781001 + ID_B1 SINE B4 96 224 0 7 1168 460 323 42 6 chr17 76492412 76492619 -18780032 + B3A SINE B2 2 215 -1 7 1168 316 161 0 24 chr17 76492928 76493011 -18779640 + (TA)n Simple_repeat Simple_repeat 1 81 0 7 1168 2075 84 34 113 chr17 76493193 76493609 -18779042 - MusHAL1 LINE L1 -2971 383 1 7 1168 232 379 24 16 chr17 76494130 76494256 -18778395 + LTR16E2 LTR ERVL 3 129 -439 7 1168 376 292 75 43 chr17 76494455 76494616 -18778035 + LTR16E2 LTR ERVL 403 568 0 7 1168 237 210 12 36 chr17 76494683 76494767 -18777884 + CT-rich Low_complexity Low_complexity 4 85 0 7 1168 483 135 0 0 chr17 76495868 76495964 -18776687 + (TC)n Simple_repeat Simple_repeat 2 97 0 7 1168 446 296 27 27 chr17 76496241 76496387 -18776264 + MIR SINE MIR 36 181 -81 7 1168 1066 352 116 33 chr17 76496417 76497019 -18775632 + MER45B DNA Tip100 1 652 -388 7 1168 903 240 76 34 chr17 76497165 76497333 -18775318 + ORR1D1 LTR MaLR 3 170 -204 7 1168 2769 119 39 47 chr17 76497333 76497844 -18774807 + LTRIS4 LTR ERV1 1 507 0 7 1168 903 281 135 21 chr17 76497844 76498002 -18774649 + ORR1D1 LTR MaLR 171 384 0 7 1168 569 294 23 12 chr17 76498117 76498289 -18774362 + MER45B DNA Tip100 867 1039 -1 7 1168 219 284 0 15 chr17 76498311 76498379 -18774272 + (TA)n Simple_repeat Simple_repeat 2 68 0 7 1168 219 188 0 0 chr17 76498951 76498999 -18773652 + GA-rich Low_complexity Low_complexity 6 53 0 7 1168 21 0 0 0 chr17 76500168 76500189 -18772462 + AT_rich Low_complexity Low_complexity 1 21 0 1 1168 468 0 0 0 chr17 76500576 76500628 -18772023 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 1168 603 329 67 0 chr17 76500754 76500964 -18771687 + Lx8 LINE L1 7105 7328 -145 3 1168 322 204 10 10 chr17 76500983 76501087 -18771564 + GA-rich Low_complexity Low_complexity 2 105 0 4 1168 1679 107 0 4 chr17 76501179 76501443 -18771208 - L1_Mur2 LINE L1 -1387 4490 4228 5 1168 1758 214 38 16 chr17 76501443 76501966 -18770685 + Lx4B LINE L1 6420 6972 -4 6 1168 23 92 0 0 chr17 76502040 76502105 -18770546 + AT_rich Low_complexity Low_complexity 1 65 0 7 1168 585 286 44 102 chr17 76502330 76502518 -18770133 - B3 SINE B2 0 216 37 8 1168 1054 68 0 70 chr17 76502518 76502675 -18769976 - B1_Mm SINE Alu 0 147 2 9 1168 585 286 44 102 chr17 76502675 76502712 -18769939 - B3 SINE B2 -180 36 4 8 1168 248 234 104 0 chr17 76503088 76503165 -18769486 + MLT1A LTR MaLR 3 87 -287 1 1168 415 309 32 8 chr17 76503234 76503358 -18769293 + MLT1A LTR MaLR 246 372 -2 1 1168 505 278 9 9 chr17 76503676 76503792 -18768859 - RSINE1 SINE B4 -21 144 29 1 1168 2926 181 42 11 chr17 76504091 76504188 -18768463 - RLTR20B2 LTR ERVK 0 560 465 1 1168 384 22 0 0 chr17 76504188 76504233 -18768418 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1168 519 17 0 0 chr17 76504233 76504292 -18768359 + (GA)n Simple_repeat Simple_repeat 2 61 0 1 1168 2926 181 42 11 chr17 76504292 76504736 -18767915 - RLTR20B2 LTR ERVK -96 464 2 1 1168 1094 288 55 24 chr17 76504808 76505194 -18767457 - MTD LTR MaLR -14 405 13 1 1168 26 0 0 0 chr17 76505579 76505605 -18767046 + AT_rich Low_complexity Low_complexity 1 26 0 1 1168 408 162 13 13 chr17 76505685 76505760 -18766891 - RMER5 LTR ERV1 -5 529 455 1 1168 3363 136 56 2 chr17 76505837 76506374 -18766277 + Lx3A LINE L1 6402 6967 -14 1 1168 180 0 0 0 chr17 76506374 76506394 -18766257 + (TTAA)n Simple_repeat Simple_repeat 2 21 0 1 1168 22 35 0 0 chr17 76507224 76507253 -18765398 + AT_rich Low_complexity Low_complexity 1 29 0 2 1168 281 174 0 0 chr17 76507420 76507466 -18765185 + MLT2D LTR ERVL 2 47 -367 2 1168 798 261 11 26 chr17 76508476 76508665 -18763986 - RLTR16 LTR ERVK -313 192 7 2 1168 1024 153 137 11 chr17 76508676 76508947 -18763704 - MYSERV16_I-int LTR ERVK -6 2320 2016 2 1168 403 151 41 0 chr17 76508967 76509040 -18763611 - RLTR16 LTR ERVK -419 86 11 2 1168 2273 134 83 27 chr17 76510123 76510530 -18762121 - RLTR23 LTR ERV1 0 430 1 2 1168 711 106 19 0 chr17 76510540 76510644 -18762007 - HY1 scRNA scRNA -6 106 1 2 1168 450 127 0 0 chr17 76510701 76510772 -18761879 + (TCTCTG)n Simple_repeat Simple_repeat 1 71 0 2 1168 393 117 0 0 chr17 76510801 76510861 -18761790 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 1168 2184 205 71 31 chr17 76511820 76511892 -18760759 - RLTR24 LTR ERV1 0 529 432 2 1168 279 0 0 0 chr17 76511892 76511923 -18760728 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1168 2184 205 71 31 chr17 76511923 76512359 -18760292 - RLTR24 LTR ERV1 -98 431 1 2 1168 2100 159 39 130 chr17 76512405 76512896 -18759755 + RLTR41 LTR ERV1 1 446 0 3 1168 270 294 16 48 chr17 76513273 76513462 -18759189 + L1M2 LINE L1 2764 2946 -3197 3 1168 216 0 0 0 chr17 76513824 76513848 -18758803 + (CAGA)n Simple_repeat Simple_repeat 4 27 0 3 1168 4751 163 50 1 chr17 76514294 76515146 -18757505 - Lx LINE L1 -4 6650 5757 3 1168 16635 171 56 19 chr17 76515149 76515541 -18757110 - Lx LINE L1 -849 5034 4671 3 1168 1127 68 7 0 chr17 76515541 76515687 -18756964 - B1_Mus1 SINE Alu -1 147 1 3 1168 16635 171 56 19 chr17 76515687 76517567 -18755084 - Lx LINE L1 -1213 4670 2660 3 1168 4716 118 20 71 chr17 76517567 76518413 -18754238 + RLTR13B4 LTR ERVK 1 803 0 3 1168 16635 152 84 17 chr17 76518413 76520398 -18752253 - Lx LINE L1 -3224 2659 549 3 1168 227 300 135 23 chr17 76520722 76520855 -18751796 + RMER5 LTR ERV1 33 180 -354 3 1168 2222 89 7 1 chr17 76520864 76521201 -18751450 + L1Md_F2 LINE L1 5270 5614 -686 3 1168 7440 73 5 11 chr17 76521202 76522203 -18750448 + L1Md_F2 LINE L1 5587 6581 -1 3 1168 283 331 30 30 chr17 76522224 76522355 -18750296 + RMER5 LTR ERV1 212 342 -192 3 1168 225 276 90 26 chr17 76522354 76522432 -18750219 + RMER5 LTR ERV1 452 534 0 3 1168 333 337 54 16 chr17 76522519 76522703 -18749948 - HAL1 LINE L1 -803 1704 1514 3 1168 334 48 159 0 chr17 76522971 76523089 -18749562 - L1Md_F2 LINE L1 0 6582 6488 3 1168 323 272 152 7 chr17 76523252 76523541 -18749110 - L1M3e LINE L1 -3703 3400 3070 4 1168 346 312 11 23 chr17 76524899 76525073 -18747578 - L1M3e LINE L1 -6853 177 6 4 1168 260 365 12 0 chr17 76525230 76525315 -18747336 + ID_B1 SINE B4 136 221 -3 4 1168 890 128 0 7 chr17 76525322 76525472 -18747179 + (GGAA)n Simple_repeat Simple_repeat 3 151 0 4 1168 276 313 20 0 chr17 76525922 76526021 -18746630 - MER45B DNA Tip100 -87 953 853 4 1168 563 304 53 6 chr17 76526317 76526486 -18746165 - MLT1A0 LTR MaLR -37 328 152 4 1168 261 119 0 0 chr17 76526509 76526551 -18746100 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1168 8140 102 45 7 chr17 76528122 76529688 -18742963 - Lx3_Mus LINE L1 -8 7001 5380 4 1168 11756 126 57 14 chr17 76529658 76532377 -18740274 - Lx3_Mus LINE L1 -2739 3147 10 4 1168 343 196 64 118 chr17 76532394 76532504 -18740147 - B3A SINE B2 -1 197 94 4 1168 398 262 85 0 chr17 76532598 76532762 -18739889 - Lx5 LINE L1 0 7050 6873 4 1168 2119 208 8 42 chr17 76532762 76533283 -18739368 + Lx5 LINE L1 6037 6539 -511 4 1168 382 310 78 65 chr17 76533283 76533514 -18739137 - MLT1A0 LTR MaLR -131 234 1 5 1168 768 352 70 13 chr17 76533514 76533806 -18738845 - MER45B DNA Tip100 -731 309 1 4 1168 3105 70 59 0 chr17 76534071 76534625 -18738026 - L1_Mus2 LINE L1 -530 6036 5458 5 1168 1391 70 15 5 chr17 76534625 76534825 -18737826 + L1_Mus3 LINE L1 6432 6633 -5 5 1168 190 231 58 125 chr17 76536031 76536135 -18736516 - MIR SINE MIR -39 223 127 5 1168 702 169 18 0 chr17 76536857 76537023 -18735628 - Lx9 LINE L1 -12 7632 7464 5 1168 324 189 0 0 chr17 76537096 76537170 -18735481 + (TA)n Simple_repeat Simple_repeat 2 75 0 5 1168 444 235 43 14 chr17 76537178 76537316 -18735335 - Lx9 LINE L1 -140 7504 7363 5 1168 243 270 52 75 chr17 76537760 76537958 -18734693 - RMER12 LTR ERVK -423 899 720 5 1168 730 131 11 38 chr17 76538907 76539090 -18733561 + CT-rich Low_complexity Low_complexity 1 178 0 5 1168 983 111 0 37 chr17 76539090 76539277 -18733374 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 5 1168 210 91 0 0 chr17 76539592 76539625 -18733026 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 6 1168 2129 185 71 11 chr17 76540173 76540621 -18732030 + RLTR11A LTR ERVK 52 526 -2 6 1168 2115 71 122 6 chr17 76540699 76541010 -18731641 + L1_Mus2 LINE L1 6220 6566 0 6 1168 225 0 0 0 chr17 76541408 76541433 -18731218 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1168 320 220 74 42 chr17 76541552 76541647 -18731004 + ID_B1 SINE B4 125 222 -2 6 1168 252 0 0 0 chr17 76542471 76542499 -18730152 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 1168 277 295 148 26 chr17 76542558 76542673 -18729978 - B4A SINE B4 -72 220 92 6 1168 574 130 0 18 chr17 76543420 76543530 -18729121 + (GAAA)n Simple_repeat Simple_repeat 1 108 0 6 1168 256 165 51 0 chr17 76543978 76544057 -18728594 + (TCTCTG)n Simple_repeat Simple_repeat 2 84 0 6 1168 22 35 0 0 chr17 76545166 76545195 -18727456 + AT_rich Low_complexity Low_complexity 1 29 0 6 1168 343 344 97 19 chr17 76545195 76545326 -18727325 - Lx8 LINE L1 -3 7470 7335 7 1168 321 26 0 0 chr17 76545326 76545364 -18727287 + (CAT)n Simple_repeat Simple_repeat 2 39 0 7 1168 343 344 97 19 chr17 76545364 76545543 -18727108 - Lx8 LINE L1 -139 7334 7137 7 1168 468 0 0 0 chr17 76545869 76545921 -18726730 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 1169 279 0 0 0 chr17 76546547 76546578 -18726073 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1169 7463 197 39 5 chr17 76546599 76549060 -18723591 - Lx3A LINE L1 -11 6970 4409 7 1169 411 169 26 13 chr17 76549060 76549138 -18723513 + ORR1A2 LTR MaLR 1 79 -248 7 1169 1240 186 37 17 chr17 76549502 76549802 -18722849 - Lx9 LINE L1 -1 7643 7338 7 1169 2874 63 11 0 chr17 76549965 76550331 -18722320 - L1_Mus1 LINE L1 0 6567 6198 7 1169 844 225 59 15 chr17 76550700 76550903 -18721748 + B3 SINE B2 5 216 0 7 1169 277 241 60 0 chr17 76550908 76550991 -18721660 + Lx9 LINE L1 7162 7249 -395 7 1169 180 0 0 0 chr17 76551110 76551130 -18721521 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 8 1169 4129 105 3 2 chr17 76551837 76552420 -18720231 - MT2B2 LTR ERVL 0 584 1 8 1169 186 106 20 41 chr17 76552482 76552531 -18720120 + (TTAA)n Simple_repeat Simple_repeat 3 50 0 8 1169 180 111 0 0 chr17 76553697 76553724 -18718927 + (T)n Simple_repeat Simple_repeat 1 27 0 8 1169 10124 9 0 0 chr17 76553770 76555659 -18716992 - L1Md_A LINE L1 0 6582 4694 8 1169 1774 180 3 59 chr17 76556055 76556392 -18716259 - ORR1A3 LTR MaLR -8 318 1 8 1169 242 324 177 18 chr17 76556609 76556835 -18715816 + L1MCa LINE L1 533 794 -5251 8 1169 300 329 25 13 chr17 76557036 76557193 -18715458 + L1MCa LINE L1 1082 1240 -5511 8 1169 441 221 66 55 chr17 76558176 76558358 -18714293 + RLTR15 LTR ERVK 160 343 -16 8 1169 2018 241 102 75 chr17 76558368 76559023 -18713628 + Lx6 LINE L1 6783 7455 -5 8 1169 310 359 0 34 chr17 76560063 76560210 -18712441 - MIRb SINE MIR -94 174 33 8 1169 565 315 39 6 chr17 76560681 76560860 -18711791 - MIRc SINE MIR -2 266 82 9 1169 291 184 24 73 chr17 76561130 76561212 -18711439 + Lx6 LINE L1 7367 7444 -16 9 1169 396 366 0 0 chr17 76561941 76562053 -18710598 - PB1 SINE Alu -8 119 8 9 1169 262 212 33 121 chr17 76563216 76563307 -18709344 + RSINE1 SINE B4 83 165 0 9 1169 426 114 0 0 chr17 76563307 76563377 -18709274 + (CA)n Simple_repeat Simple_repeat 1 70 0 9 1169 289 22 67 0 chr17 76563948 76563993 -18708658 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 9 1169 508 352 62 59 chr17 76565465 76565755 -18706896 + B4A SINE B4 2 292 0 9 1169 26269 154 38 8 chr17 76567202 76569721 -18702930 + L1_Mus3 LINE L1 389 2996 -2887 9 1169 209 33 33 0 chr17 76569721 76569751 -18702900 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 9 1169 26269 147 14 10 chr17 76569751 76572399 -18700252 + L1_Mus3 LINE L1 2997 5658 -225 9 1169 703 214 176 50 chr17 76572399 76572762 -18699889 + RLTR9E LTR ERVK 1 409 0 9 1169 26269 124 20 37 chr17 76572762 76573303 -18699348 + L1_Mus3 LINE L1 5659 6172 -466 9 1169 711 0 0 0 chr17 76573303 76573382 -18699269 + (TC)n Simple_repeat Simple_repeat 1 79 0 1 1169 6257 124 20 37 chr17 76573382 76573838 -18698813 + L1_Mus3 LINE L1 6173 6636 -2 9 1169 302 97 0 97 chr17 76573852 76573955 -18698696 + A-rich Low_complexity Low_complexity 2 94 0 1 1169 420 55 0 0 chr17 76574953 76575008 -18697643 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1169 364 307 50 50 chr17 76575840 76576001 -18696650 - MIR SINE MIR -23 245 81 1 1169 245 146 21 0 chr17 76576367 76576415 -18696236 + C-rich Low_complexity Low_complexity 4 52 0 1 1169 461 331 6 19 chr17 76576421 76576578 -18696073 - Lx6 LINE L1 -61 7399 7245 1 1169 647 225 28 42 chr17 76576803 76576947 -18695704 + B1_Mur2 SINE Alu 2 143 -6 1 1169 240 35 0 0 chr17 76576948 76576977 -18695674 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 1169 228 297 33 0 chr17 76576979 76577070 -18695581 - L1M5 LINE L1 -2039 4107 4014 1 1169 948 322 17 10 chr17 76577233 76577522 -18695129 - Lx8 LINE L1 -185 7288 6998 1 1169 326 311 73 29 chr17 76577620 76577934 -18694717 - L1M5 LINE L1 -2228 3918 3591 1 1169 950 132 185 0 chr17 76578021 76578210 -18694441 - URR1B DNA MER1_type 0 225 2 1 1169 9595 99 19 38 chr17 76579029 76580165 -18692486 - Lx3_Mus LINE L1 0 7009 5908 1 1169 429 20 0 0 chr17 76580165 76580215 -18692436 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 1 1169 9595 76 3 2 chr17 76580215 76580736 -18691915 - Lx3_Mus LINE L1 -1102 5907 5381 1 1169 2311 97 3 0 chr17 76580738 76581068 -18691583 + L1_Mur1 LINE L1 4487 4817 -1069 1 1169 207 0 0 0 chr17 76581207 76581230 -18691421 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 1169 316 433 6 24 chr17 76582480 76582648 -18690003 - B3A SINE B2 -33 165 1 1 1169 24 53 0 0 chr17 76582810 76582848 -18689803 + AT_rich Low_complexity Low_complexity 1 38 0 1 1169 21 0 0 0 chr17 76583626 76583647 -18689004 + AT_rich Low_complexity Low_complexity 1 21 0 1 1169 221 0 0 33 chr17 76583782 76583812 -18688839 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 1169 1145 161 66 0 chr17 76583972 76584183 -18688468 - URR1B DNA MER1_type 0 225 1 1 1169 204 135 0 0 chr17 76585339 76585376 -18687275 + (TC)n Simple_repeat Simple_repeat 2 38 0 1 1169 421 283 78 22 chr17 76585790 76586061 -18686590 - L1MA4 LINE L1 -365 5935 5650 1 1169 330 274 0 0 chr17 76586116 76586222 -18686429 - Lx9 LINE L1 -7 7637 7532 1 1169 415 322 51 34 chr17 76586252 76586548 -18686103 - L1_Mur3 LINE L1 -1359 4521 4221 1 1169 622 293 41 29 chr17 76586792 76586964 -18685687 - ORR1E LTR MaLR -182 177 4 1 1169 441 103 0 0 chr17 76587502 76587570 -18685081 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 1169 253 323 75 0 chr17 76588886 76588979 -18683672 - LTR86B1 LTR ERVL -382 111 12 1 1169 441 0 0 0 chr17 76589666 76589715 -18682936 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1169 612 0 0 0 chr17 76589715 76589782 -18682869 + (GA)n Simple_repeat Simple_repeat 2 69 0 1 1169 257 309 24 12 chr17 76589840 76589922 -18682729 + RSINE1 SINE B4 72 154 -11 1 1169 5202 235 50 4 chr17 76590856 76592030 -18680621 + Lx5 LINE L1 5820 7047 -3 1 1169 27 0 0 0 chr17 76592704 76592731 -18679920 + AT_rich Low_complexity Low_complexity 1 27 0 1 1169 254 50 0 24 chr17 76593461 76593502 -18679149 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 1 1169 216 0 0 0 chr17 76593577 76593601 -18679050 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1 1169 8125 48 3 0 chr17 76593820 76595372 -18677279 - L1Md_F2 LINE L1 -12 6570 5016 1 1169 22 56 0 0 chr17 76595375 76595411 -18677240 + AT_rich Low_complexity Low_complexity 1 36 0 1 1169 32952 90 15 16 chr17 76595563 76601786 -18670865 - L1Md_F2 LINE L1 -15 6567 352 1 1169 402 21 0 0 chr17 76602654 76602701 -18669950 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1 1169 192 184 0 0 chr17 76602805 76602854 -18669797 + (CATA)n Simple_repeat Simple_repeat 4 52 0 1 1169 767 256 52 133 chr17 76603766 76604172 -18668479 - ORR1D1 LTR MaLR 0 374 2 1 1169 317 94 38 0 chr17 76604402 76604455 -18668196 + (CATATA)n Simple_repeat Simple_repeat 2 56 0 1 1169 420 20 0 0 chr17 76604455 76604504 -18668147 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1169 271 310 106 23 chr17 76604876 76605008 -18667643 + MIRc SINE MIR 119 261 -7 1 1169 342 45 0 0 chr17 76605372 76605416 -18667235 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1169 23996 75 4 1 chr17 76605442 76609376 -18663275 - L1Md_F2 LINE L1 0 6582 2639 1 1169 8240 30 0 0 chr17 76609382 76610977 -18661674 - L1Md_T LINE L1 0 6585 4990 1 1169 8501 26 0 0 chr17 76610995 76612153 -18660498 - L1Md_T LINE L1 0 6582 5425 1 1169 11225 22 0 0 chr17 76612151 76613466 -18659185 + L1_Mm LINE L1 3824 5138 -745 1 1169 29797 53 1 4 chr17 76613459 76618241 -18654410 - L1Md_T LINE L1 -882 5004 141 1 1169 10021 113 13 11 chr17 76618222 76620428 -18652223 - L1Md_F2 LINE L1 -3230 2653 446 1 1169 9002 144 14 1 chr17 76620933 76622407 -18650244 - L1_Mm LINE L1 -150 5733 4242 1 1169 319 77 0 0 chr17 76622407 76622459 -18650192 + Lx LINE L1 6599 6650 -4 1 1169 2206 78 10 7 chr17 76622634 76622942 -18649709 + L1_Mus3 LINE L1 6315 6623 -15 1 1169 834 39 0 0 chr17 76622945 76623047 -18649604 + (GAAA)n Simple_repeat Simple_repeat 4 105 0 1 1169 815 187 108 60 chr17 76623996 76624366 -18648285 + RMER6B LTR ERVK 1 450 -11 1 1169 6863 200 30 8 chr17 76624387 76626141 -18646510 - Lx5 LINE L1 -45 7005 5205 1 1169 3858 181 27 82 chr17 76626141 76627069 -18645582 + L1_Mur2 LINE L1 3986 4862 -1015 1 1169 243 57 56 19 chr17 76627076 76627130 -18645521 + (CAAAAA)n Simple_repeat Simple_repeat 5 60 0 1 1169 1696 237 179 21 chr17 76627190 76627711 -18644940 - RMER20B LTR ERVK -23 604 2 1 1169 1811 185 12 0 chr17 76627717 76628058 -18644593 + L1_Mur2 LINE L1 4884 5228 -649 1 1169 226 277 78 35 chr17 76628340 76628456 -18644195 + Tigger1 DNA MER2_type 1064 1184 -1234 1 1169 339 44 0 0 chr17 76629364 76629409 -18643242 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 1169 257 0 30 0 chr17 76629520 76629553 -18643098 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1169 284 44 44 0 chr17 76629781 76629826 -18642825 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 1169 9061 62 3 1 chr17 76629856 76631026 -18641625 - L1_Mm LINE L1 -347 5536 4365 1 1169 4870 39 2 2 chr17 76631026 76631611 -18641040 + L1Md_F2 LINE L1 5996 6580 -2 1 1169 210 133 42 62 chr17 76631708 76631804 -18640847 + (TCTCTG)n Simple_repeat Simple_repeat 4 97 0 1 1169 438 327 118 55 chr17 76632011 76632341 -18640310 - MTEa LTR MaLR -12 367 17 1 1169 324 0 0 0 chr17 76632563 76632599 -18640052 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 1169 21 36 0 0 chr17 76632795 76632823 -18639828 + AT_rich Low_complexity Low_complexity 1 28 0 1 1169 341 215 0 0 chr17 76634245 76634310 -18638341 + L1_Rod LINE L1 5119 5183 -664 1 1169 312 27 0 0 chr17 76634339 76634376 -18638275 + (CCAA)n Simple_repeat Simple_repeat 4 40 0 1 1169 1748 134 0 27 chr17 76634415 76634713 -18637938 + Lx2 LINE L1 6707 6996 -1 1 1169 4207 93 0 0 chr17 76634735 76635295 -18637356 - L1_Mur1 LINE L1 -36 5850 5291 1 1169 6822 88 14 23 chr17 76635302 76636313 -18636338 + Lx3_Mus LINE L1 6003 7004 -5 1 1169 829 271 58 46 chr17 76636315 76636660 -18635991 + L1_Rod LINE L1 5380 5728 -119 1 1169 1066 89 7 0 chr17 76636665 76636811 -18635840 + B1_Mm SINE Alu 1 147 0 1 1169 591 15 0 0 chr17 76638163 76638231 -18634420 + (TC)n Simple_repeat Simple_repeat 1 68 0 1 1169 216 0 0 0 chr17 76638231 76638254 -18634397 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1169 4694 133 17 12 chr17 76638642 76639621 -18633030 - Lx LINE L1 -635 6019 5036 1 1169 3665 137 9 42 chr17 76639622 76640261 -18632390 + Lx LINE L1 6035 6652 -2 1 1169 490 291 22 22 chr17 76640443 76640580 -18632071 - Lx9 LINE L1 -1127 6517 6381 1 1169 755 303 112 10 chr17 76640849 76641170 -18631481 - Lx9 LINE L1 -1683 5961 5610 1 1169 1837 247 37 7 chr17 76641170 76641574 -18631077 - MTC LTR MaLR 0 421 6 1 1169 585 230 0 48 chr17 76641579 76641725 -18630926 - Lx9 LINE L1 -266 5581 5443 1 1169 22 35 0 0 chr17 76642037 76642066 -18630585 + AT_rich Low_complexity Low_complexity 1 29 0 1 1169 1998 157 77 0 chr17 76642330 76642694 -18629957 + ORR1B1 LTR MaLR 3 394 0 1 1169 435 92 0 0 chr17 76642983 76643048 -18629603 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 1 1169 2653 181 47 4 chr17 76643523 76644018 -18628633 + Lx2 LINE L1 6481 6996 -1 1 1169 308 289 153 24 chr17 76644431 76644555 -18628096 + MIRb SINE MIR 8 147 -121 1 1169 1345 34 0 32 chr17 76645258 76645443 -18627208 + (TCTCC)n Simple_repeat Simple_repeat 1 179 0 1 1169 611 169 7 0 chr17 76645446 76645594 -18627057 + CT-rich Low_complexity Low_complexity 2 150 0 1 1169 2761 114 9 21 chr17 76646255 76646683 -18625968 + Lx3_Mus LINE L1 6562 6986 -23 1 1169 255 31 0 0 chr17 76646683 76646715 -18625936 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1 1169 985 60 75 0 chr17 76646853 76646987 -18625664 - B1_Mus2 SINE Alu -2 145 2 1 1169 317 263 83 10 chr17 76649096 76649192 -18623459 + MTEa LTR MaLR 209 311 -68 1 1169 297 0 0 0 chr17 76649201 76649234 -18623417 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 1 1169 1251 231 25 48 chr17 76649510 76649884 -18622767 + RLTR11A LTR ERVK 165 518 -10 1 1169 17471 191 44 34 chr17 76649902 76655320 -18617331 + Lx4B LINE L1 1669 7026 -32 1 1169 209 33 33 0 chr17 76655333 76655363 -18617288 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 1 1169 279 0 0 0 chr17 76655522 76655553 -18617098 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1169 770 224 25 6 chr17 76655798 76655837 -18616814 - RLTR11B LTR ERVK -286 167 130 1 1169 2335 207 31 8 chr17 76655837 76656352 -18616299 - RLTR11A2 LTR ERVK 0 527 1 1 1169 770 224 25 6 chr17 76656352 76656474 -18616177 - RLTR11B LTR ERVK -324 129 4 1 1169 327 335 121 15 chr17 76658102 76658308 -18614343 + MIR SINE MIR 8 235 -27 1 1169 405 234 93 0 chr17 76658648 76658755 -18613896 - MTEa LTR MaLR -3 376 260 1 1169 24 53 0 0 chr17 76659708 76659746 -18612905 + AT_rich Low_complexity Low_complexity 1 38 0 1 1169 252 0 0 0 chr17 76660004 76660032 -18612619 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 1169 594 326 119 22 chr17 76660421 76660823 -18611828 + Lx8 LINE L1 7026 7466 -7 2 1169 312 94 0 0 chr17 76660993 76661046 -18611605 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1169 2546 60 3 6 chr17 76661698 76662033 -18610618 - L1Md_F2 LINE L1 -12 6570 6237 2 1169 185 289 0 0 chr17 76663336 76663388 -18609263 + MER5A DNA MER1_type 44 95 -94 2 1169 203 220 0 20 chr17 76663433 76663484 -18609167 + (TTTA)n Simple_repeat Simple_repeat 4 53 0 2 1169 578 356 28 44 chr17 76663557 76663807 -18608844 - B4A SINE B4 -45 247 2 2 1169 915 290 107 14 chr17 76664072 76664362 -18608289 - ORR1D2 LTR MaLR -53 317 1 2 1169 5045 210 47 8 chr17 76664423 76665531 -18607120 + Lx4B LINE L1 5854 7004 -54 2 1169 201 250 0 0 chr17 76665704 76665764 -18606887 + T-rich Low_complexity Low_complexity 1 60 0 2 1169 6484 148 48 6 chr17 76665764 76666851 -18605800 - Lx3C LINE L1 -8 6968 5836 2 1169 1204 140 0 0 chr17 76666846 76667046 -18605605 - L1_Mur2 LINE L1 -1672 4205 4006 2 1169 1570 205 20 26 chr17 76667084 76667425 -18605226 - Lx7 LINE L1 -452 7244 6906 2 1169 10533 100 17 2 chr17 76667420 76669646 -18603005 + L1_Mus2 LINE L1 4311 6565 -1 2 1169 298 191 63 0 chr17 76669678 76669741 -18602910 - Lx7 LINE L1 -772 6924 6858 2 1169 4032 86 11 7 chr17 76672425 76672986 -18599665 + L1Md_F2 LINE L1 6019 6581 -1 2 1169 23 0 0 0 chr17 76673211 76673234 -18599417 + AT_rich Low_complexity Low_complexity 1 23 0 2 1169 480 297 0 0 chr17 76673249 76673360 -18599291 + B1F SINE Alu 31 141 -8 2 1169 276 314 11 34 chr17 76674790 76674879 -18597772 + PB1D7 SINE Alu 28 114 -6 2 1169 282 79 31 16 chr17 76675733 76675797 -18596854 + (CAAA)n Simple_repeat Simple_repeat 2 66 0 2 1169 502 259 18 44 chr17 76676350 76676463 -18596188 + ID_B1 SINE B4 96 205 -19 2 1170 184 440 14 7 chr17 76677834 76677976 -18594675 - MIRc SINE MIR -125 143 1 2 1170 872 337 48 59 chr17 76678598 76679323 -18593328 + Lx8 LINE L1 6748 7464 -9 2 1170 452 249 88 12 chr17 76680651 76680822 -18591829 - B3A SINE B2 -11 187 4 2 1170 890 239 0 5 chr17 76680870 76681055 -18591596 - Lx5 LINE L1 -74 6976 6793 2 1170 24 32 0 0 chr17 76681586 76681617 -18591034 + AT_rich Low_complexity Low_complexity 1 31 0 2 1170 306 0 0 0 chr17 76682476 76682510 -18590141 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2 1170 281 190 33 77 chr17 76682587 76682678 -18589973 + MTEb LTR MaLR 275 361 -18 2 1170 850 77 31 0 chr17 76684369 76684499 -18588152 + (TTTC)n Simple_repeat Simple_repeat 3 136 0 2 1170 22 0 0 0 chr17 76684701 76684723 -18587928 + AT_rich Low_complexity Low_complexity 1 22 0 2 1170 387 363 51 90 chr17 76684896 76685208 -18587443 - MLT1H1 LTR MaLR -253 302 3 2 1170 30 0 0 0 chr17 76685688 76685718 -18586933 + AT_rich Low_complexity Low_complexity 1 30 0 2 1170 3544 186 80 25 chr17 76686640 76687931 -18584720 + Lx2A LINE L1 5618 7000 -8 2 1170 4534 91 0 11 chr17 76687940 76688583 -18584068 + L1_Mus4 LINE L1 5998 6633 -3 2 1170 389 378 23 11 chr17 76688959 76689133 -18583518 - B3A SINE B2 -15 183 8 2 1170 22 0 0 0 chr17 76689144 76689166 -18583485 + AT_rich Low_complexity Low_complexity 1 22 0 2 1170 360 302 50 0 chr17 76689200 76689319 -18583332 + Lx8 LINE L1 7208 7332 -141 2 1170 25 51 0 0 chr17 76690091 76690130 -18582521 + AT_rich Low_complexity Low_complexity 1 39 0 2 1170 1017 236 36 20 chr17 76690350 76690601 -18582050 + Lx5 LINE L1 6793 7047 -3 2 1170 16610 142 29 16 chr17 76690612 76690631 -18582020 + L1_Mur2 LINE L1 1579 1600 -4277 2 1170 563 281 10 45 chr17 76690631 76690832 -18581819 + B3A SINE B2 5 198 0 2 1170 16610 142 29 16 chr17 76690832 76691286 -18581365 + L1_Mur2 LINE L1 1601 2058 -3819 2 1170 360 77 0 0 chr17 76691286 76691338 -18581313 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1170 16610 160 35 22 chr17 76691338 76693946 -18578705 + L1_Mur2 LINE L1 2059 4751 -1096 2 1170 253 79 53 0 chr17 76693946 76693984 -18578667 + RLTR31A_Mm LTR ERVK 545 584 0 2 1170 16610 160 35 22 chr17 76693984 76694316 -18578335 + L1_Mur2 LINE L1 4752 5095 -752 2 1170 1839 109 14 3 chr17 76694316 76694602 -18578049 + L1_Mus3 LINE L1 6338 6626 -12 2 1170 2345 167 53 7 chr17 76694609 76695026 -18577625 + Lx4A LINE L1 6613 7048 -10 2 1170 201 39 0 0 chr17 76695028 76695054 -18577597 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 2 1170 5665 282 74 65 chr17 76695054 76695577 -18577074 + L1_Mur2 LINE L1 5103 5618 -229 2 1170 1918 107 178 23 chr17 76695888 76696242 -18576409 + RLTR9E LTR ERVK 1 409 0 2 1170 4642 146 40 15 chr17 76696819 76697598 -18575053 + L1VL4 LINE L1 5 802 -5500 2 1170 754 200 0 0 chr17 76697594 76697739 -18574912 + Lx LINE L1 4913 5057 -826 2 1170 6762 134 7 1 chr17 76697742 76699177 -18573474 + Lx LINE L1 5206 6651 -3 2 1170 1228 203 59 118 chr17 76699938 76700346 -18572305 - ORR1B1 LTR MaLR -8 386 3 2 1170 375 274 83 25 chr17 76700478 76700598 -18572053 - RMER12 LTR ERVK -429 893 767 2 1170 197 83 0 27 chr17 76700778 76700815 -18571836 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 2 1170 461 250 73 29 chr17 76701840 76701976 -18570675 - RMER30 DNA MER1_type -55 147 6 2 1170 393 81 0 0 chr17 76704625 76704687 -18567964 + (TC)n Simple_repeat Simple_repeat 1 62 0 2 1170 246 323 9 57 chr17 76704702 76704807 -18567844 + MER110A LTR ERV1 369 468 0 2 1170 288 0 0 0 chr17 76704884 76704916 -18567735 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1170 410 399 9 4 chr17 76705333 76705562 -18567089 + MIRb SINE MIR 8 237 -31 2 1170 192 289 58 46 chr17 76706328 76706415 -18566236 - MIRc SINE MIR -164 104 17 2 1170 1563 116 0 4 chr17 76706858 76707091 -18565560 - L1Md_F2 LINE L1 -2 6580 6349 2 1170 2172 52 0 0 chr17 76707091 76707358 -18565293 + L1_Mm LINE L1 5262 5528 -355 2 1170 288 0 0 0 chr17 76707495 76707527 -18565124 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1170 548 339 16 21 chr17 76707593 76707780 -18564871 - B4A SINE B4 -18 274 89 2 1170 871 39 0 0 chr17 76707977 76708080 -18564571 - L1Md_F3 LINE L1 -213 6369 6267 2 1170 1395 27 21 11 chr17 76708080 76708267 -18564384 + L1Md_F3 LINE L1 6395 6583 -1 2 1170 579 127 28 38 chr17 76708267 76708287 -18564364 - L1_Mus4 LINE L1 -377 6259 6240 2 1170 185 255 0 0 chr17 76708669 76708716 -18563935 - L2 LINE L2 -1375 2044 1998 2 1170 1342 234 38 3 chr17 76708717 76709030 -18563621 + Lx7 LINE L1 6839 7162 -534 2 1170 672 246 63 0 chr17 76709245 76709420 -18563231 + Lx7 LINE L1 7155 7340 -356 2 1170 2500 190 5 62 chr17 76709455 76710006 -18562645 - L1_Mur2 LINE L1 -307 5570 5051 2 1170 2715 133 87 4 chr17 76710006 76710467 -18562184 + Lx3A LINE L1 6466 6964 -17 2 1170 297 0 0 0 chr17 76710474 76710507 -18562144 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2 1170 1166 244 106 6 chr17 76711368 76711690 -18560961 + ORR1D2 LTR MaLR 5 358 -12 2 1170 543 56 0 0 chr17 76712973 76713044 -18559607 + (TTA)n Simple_repeat Simple_repeat 3 73 0 2 1170 272 299 23 0 chr17 76713301 76713388 -18559263 + CT-rich Low_complexity Low_complexity 2 90 0 2 1170 210 206 0 0 chr17 76714154 76714217 -18558434 + (TATG)n Simple_repeat Simple_repeat 2 64 0 2 1170 30 27 0 0 chr17 76714632 76714669 -18557982 + AT_rich Low_complexity Low_complexity 1 37 0 2 1170 4004 204 62 29 chr17 76714669 76715564 -18557087 - Lx2B LINE L1 -13 6987 6064 2 1170 6151 178 78 13 chr17 76715565 76717150 -18555501 + Lx5 LINE L1 5357 7042 -8 2 1170 1508 128 0 24 chr17 76718584 76718833 -18553818 - L1Md_F2 LINE L1 0 6582 6340 2 1170 21552 92 6 10 chr17 76718834 76722182 -18550469 - L1Md_F2 LINE L1 -433 6149 2816 2 1170 26 82 0 0 chr17 76722493 76722554 -18550097 + AT_rich Low_complexity Low_complexity 1 61 0 2 1170 22 35 0 0 chr17 76722687 76722716 -18549935 + AT_rich Low_complexity Low_complexity 1 29 0 2 1170 4135 187 117 17 chr17 76723181 76723538 -18549113 + RMER17B LTR ERVK 1 394 -564 2 1170 450 0 0 0 chr17 76723538 76723588 -18549063 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 1170 4135 187 117 17 chr17 76723588 76724101 -18548550 + RMER17B LTR ERVK 395 958 0 2 1170 459 272 171 44 chr17 76725304 76725485 -18547166 + MTE2b LTR MaLR 176 379 0 2 1170 32 57 0 0 chr17 76725774 76725827 -18546824 + AT_rich Low_complexity Low_complexity 1 53 0 2 1170 201 176 0 0 chr17 76727729 76727763 -18544888 + T-rich Low_complexity Low_complexity 1 34 0 2 1170 33 25 0 0 chr17 76728377 76728417 -18544234 + AT_rich Low_complexity Low_complexity 1 40 0 2 1170 921 143 20 0 chr17 76728726 76728873 -18543778 - B1_Mur4 SINE Alu 0 150 1 2 1170 231 399 25 25 chr17 76729012 76729174 -18543477 - Charlie11 DNA MER1_type -317 1879 1718 2 1170 243 323 0 0 chr17 76729199 76729264 -18543387 + ID4 SINE ID 5 69 -14 2 1170 469 227 99 68 chr17 76729723 76729884 -18542767 + Lx5 LINE L1 6669 6834 -216 2 1170 3084 185 5 18 chr17 76729812 76730368 -18542283 - Lx5 LINE L1 -357 6693 6145 2 1170 565 310 58 75 chr17 76730382 76730675 -18541976 - Lx8 LINE L1 -314 7159 6872 2 1170 2866 173 233 27 chr17 76730705 76731550 -18541101 + L1_Mus3 LINE L1 4223 5241 -642 2 1170 295 250 48 104 chr17 76731552 76731677 -18540974 + RLTR25B LTR ERVK 392 509 -519 2 1170 730 118 0 0 chr17 76731610 76731720 -18540931 + B1_Mm SINE Alu 38 147 0 2 1170 198 0 0 0 chr17 76731720 76731742 -18540909 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1170 4000 26 0 2 chr17 76731767 76732236 -18540415 - L1Md_T LINE L1 -463 6119 5652 2 1170 3825 39 0 2 chr17 76732236 76732696 -18539955 + L1Md_T LINE L1 6124 6582 0 2 1170 7182 113 5 7 chr17 76732700 76734010 -18538641 + L1_Mus3 LINE L1 5328 6636 -2 2 1170 431 300 99 37 chr17 76734943 76735237 -18537414 - Lx8 LINE L1 -252 7221 6910 2 1170 1364 319 56 26 chr17 76735252 76735864 -18536787 - Lx8 LINE L1 -618 6855 6226 2 1170 477 0 0 0 chr17 76736950 76737003 -18535648 + (TA)n Simple_repeat Simple_repeat 1 53 0 2 1170 768 52 0 0 chr17 76737642 76737739 -18534912 + (TG)n Simple_repeat Simple_repeat 1 97 0 2 1170 372 43 0 0 chr17 76737739 76737784 -18534867 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 1170 34 42 0 0 chr17 76738831 76738879 -18533772 + AT_rich Low_complexity Low_complexity 1 48 0 2 1170 450 0 0 0 chr17 76740245 76740295 -18532356 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1170 618 340 22 41 chr17 76741082 76741352 -18531299 + Lx8 LINE L1 7011 7275 -198 3 1170 257 0 30 0 chr17 76742221 76742254 -18530397 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 3 1170 227 109 43 21 chr17 76742609 76742656 -18529995 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 3 1170 1044 141 0 56 chr17 76742825 76743021 -18529630 - Lx2 LINE L1 -91 6906 6722 3 1170 2382 88 26 0 chr17 76743025 76743364 -18529287 + Lx2 LINE L1 6361 6708 -289 3 1170 313 298 50 71 chr17 76743823 76743964 -18528687 + RSINE1 SINE B4 11 148 -17 3 1170 1097 88 0 0 chr17 76744002 76744149 -18528502 + B1_Mus1 SINE Alu 1 147 -1 3 1170 273 164 0 0 chr17 76744150 76744223 -18528428 + A-rich Low_complexity Low_complexity 1 73 0 3 1170 32739 101 13 4 chr17 76744835 76751257 -18521394 - L1Md_F2 LINE L1 -3 6579 105 3 1170 384 312 58 7 chr17 76751617 76751772 -18520879 + Charlie1a DNA MER1_type 583 745 -710 3 1170 268 141 32 32 chr17 76751777 76751902 -18520749 + (CA)n Simple_repeat Simple_repeat 2 126 0 3 1170 26 0 0 0 chr17 76752024 76752050 -18520601 + AT_rich Low_complexity Low_complexity 1 26 0 3 1170 1650 315 18 8 chr17 76752064 76752557 -18520094 - Lx5 LINE L1 -22 7028 6531 3 1170 349 174 122 61 chr17 76752557 76752655 -18519996 - RLTR11A2 LTR ERVK -423 104 1 3 1170 517 266 0 0 chr17 76752658 76752771 -18519880 - Lx5 LINE L1 -644 6406 6294 3 1170 4042 79 5 16 chr17 76752892 76753457 -18519194 - L1Md_F2 LINE L1 0 6582 6024 3 1170 646 336 69 50 chr17 76753542 76753946 -18518705 - Lx8 LINE L1 -247 7226 6815 3 1170 474 33 0 0 chr17 76754346 76754406 -18518245 + (TG)n Simple_repeat Simple_repeat 2 61 0 3 1170 287 336 110 52 chr17 76754414 76754568 -18518083 + MER77 LTR ERVL 224 386 -221 3 1170 256 272 87 0 chr17 76754636 76754725 -18517926 + Charlie1a DNA MER1_type 760 856 -599 3 1170 186 43 0 0 chr17 76754725 76754748 -18517903 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3 1170 256 272 87 0 chr17 76754748 76754761 -18517890 + Charlie1a DNA MER1_type 857 870 -585 3 1170 186 236 0 0 chr17 76757943 76757998 -18514653 + A-rich Low_complexity Low_complexity 1 55 0 3 1170 3271 28 15 5 chr17 76759658 76760050 -18512601 + MTA_Mm LTR MaLR 1 396 0 3 1170 1188 249 61 58 chr17 76760255 76760617 -18512034 + MTC LTR MaLR 10 372 -49 3 1170 25937 106 65 7 chr17 76760652 76761928 -18510723 - L1_Mus3 LINE L1 0 6638 5290 3 1170 2477 60 0 0 chr17 76761928 76762247 -18510404 + L1Md_A LINE L1 6264 6582 0 3 1170 25937 154 11 15 chr17 76762247 76764979 -18507672 - L1_Mus3 LINE L1 -594 5289 2578 3 1170 3314 40 2 0 chr17 76764979 76765374 -18507277 - MTA_Mm LTR MaLR 0 396 1 3 1170 25937 167 14 41 chr17 76765374 76767411 -18505240 - L1_Mus3 LINE L1 -3306 2577 609 3 1170 405 39 0 0 chr17 76767527 76767578 -18505073 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 1170 236 242 16 0 chr17 76767593 76767655 -18504996 + GA-rich Low_complexity Low_complexity 2 64 0 3 1170 432 0 0 0 chr17 76767903 76767951 -18504700 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1170 558 41 0 0 chr17 76767951 76768023 -18504628 + (TG)n Simple_repeat Simple_repeat 2 74 0 3 1170 530 315 117 51 chr17 76768966 76769317 -18503334 + Lx8 LINE L1 7094 7467 -6 3 1170 4975 179 43 4 chr17 76769385 76770291 -18502360 - RMER17B LTR ERVK -17 941 1 3 1170 37 0 0 0 chr17 76770295 76770332 -18502319 + AT_rich Low_complexity Low_complexity 1 37 0 3 1170 1299 89 17 6 chr17 76770334 76770515 -18502136 - B2_Mm2 SINE B2 -12 183 1 3 1170 356 104 0 0 chr17 76770753 76770801 -18501850 - L1Md_F2 LINE L1 -418 6164 6117 3 1170 28 0 0 0 chr17 76770825 76770853 -18501798 + AT_rich Low_complexity Low_complexity 1 28 0 3 1170 405 0 0 0 chr17 76770893 76770938 -18501713 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1170 519 297 46 97 chr17 76770944 76771220 -18501431 - B4A SINE B4 -18 274 2 3 1170 31 76 0 0 chr17 76771234 76771300 -18501351 + AT_rich Low_complexity Low_complexity 1 66 0 3 1170 331 206 117 28 chr17 76771462 76771607 -18501044 + L1MA8 LINE L1 6024 6181 -110 3 1170 467 272 102 51 chr17 76771830 76772066 -18500585 - L1MC4 LINE L1 -1134 6908 6661 3 1170 9300 130 16 7 chr17 76772712 76774288 -18498363 - Lx2A1 LINE L1 -1 7007 5414 3 1170 2951 128 10 35 chr17 76774905 76775392 -18497259 + MT2C_Mm LTR ERVL 1 475 0 3 1170 190 359 92 48 chr17 76775522 76775794 -18496857 - L2 LINE L2 -2671 748 465 3 1170 369 0 0 0 chr17 76776965 76777006 -18495645 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1170 386 128 50 17 chr17 76777145 76777264 -18495387 + (TCTCTG)n Simple_repeat Simple_repeat 4 126 0 3 1170 992 74 22 14 chr17 76777287 76777425 -18495226 - B1_Mm SINE Alu -8 139 1 3 1170 244 317 48 17 chr17 76777683 76777917 -18494734 + L1P5 LINE L1 5504 5750 -406 3 1170 449 0 0 35 chr17 76778216 76778274 -18494377 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 3 1170 1426 244 16 228 chr17 76778698 76779474 -18493177 - RMER19C LTR ERVK 0 611 1 3 1170 319 333 0 39 chr17 76779809 76779920 -18492731 - MTEa LTR MaLR -267 112 6 3 1170 1926 65 4 4 chr17 76780408 76780669 -18491982 + L1Md_F2 LINE L1 6322 6582 0 3 1170 450 224 0 0 chr17 76782607 76782723 -18489928 + (TA)n Simple_repeat Simple_repeat 2 117 0 3 1170 480 99 0 0 chr17 76783341 76783412 -18489239 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 1170 949 207 64 0 chr17 76783504 76783707 -18488944 - URR1B DNA MER1_type 0 225 10 3 1170 320 294 95 56 chr17 76783505 76783736 -18488915 + CYRA11_Mm Unknown Y-chromosome 172 411 -206 3 1170 272 331 7 124 chr17 76784237 76784299 -18488352 - RSINE1 SINE B4 -1 164 113 3 1170 2226 112 12 0 chr17 76784299 76784622 -18488029 + ORR1A2 LTR MaLR 1 327 0 3 1170 272 331 7 124 chr17 76784622 76784704 -18487947 - RSINE1 SINE B4 -53 112 37 3 1170 4972 99 8 11 chr17 76784704 76785431 -18487220 + L1_Mus3 LINE L1 5914 6638 0 3 1170 24 32 0 0 chr17 76785458 76785489 -18487162 + AT_rich Low_complexity Low_complexity 1 31 0 3 1170 25 0 0 0 chr17 76785521 76785546 -18487105 + AT_rich Low_complexity Low_complexity 1 25 0 3 1170 251 25 0 0 chr17 76785833 76785873 -18486778 + L1_Mus4 LINE L1 6591 6630 -6 3 1170 2714 211 131 5 chr17 76786980 76787581 -18485070 + RLTR33 LTR ERVK 1 677 -1 3 1170 25 51 0 0 chr17 76787619 76787658 -18484993 + AT_rich Low_complexity Low_complexity 1 39 0 3 1170 25 78 0 32 chr17 76787972 76788065 -18484586 + AT_rich Low_complexity Low_complexity 1 90 0 3 1170 636 148 0 0 chr17 76788080 76788188 -18484463 + (CA)n Simple_repeat Simple_repeat 1 108 0 3 1170 438 330 85 29 chr17 76788190 76788462 -18484189 - Lx8 LINE L1 -20 7453 7167 3 1170 23 0 0 0 chr17 76788479 76788502 -18484149 + AT_rich Low_complexity Low_complexity 1 23 0 3 1170 423 328 15 45 chr17 76788693 76788827 -18483824 + ID_B1 SINE B4 87 216 -8 3 1170 26 74 0 0 chr17 76788960 76789014 -18483637 + AT_rich Low_complexity Low_complexity 1 54 0 3 1170 31157 102 16 9 chr17 76790655 76796191 -18476460 + L1Md_F2 LINE L1 3 5585 -298 3 1170 7258 78 17 9 chr17 76796192 76797168 -18475483 + L1Md_F2 LINE L1 5587 6570 -12 3 1170 183 270 6 12 chr17 76798171 76798336 -18474315 + (TG)n Simple_repeat Simple_repeat 1 164 0 3 1170 467 328 23 50 chr17 76798344 76798553 -18474098 - B3A SINE B2 -11 205 1 3 1170 25 0 0 0 chr17 76800139 76800164 -18472487 + AT_rich Low_complexity Low_complexity 1 25 0 3 1170 585 270 60 47 chr17 76800166 76800465 -18472186 + L1MC2 LINE L1 5745 6047 -297 3 1170 336 119 0 0 chr17 76800615 76800674 -18471977 + (TCTG)n Simple_repeat Simple_repeat 2 60 0 3 1170 180 250 0 0 chr17 76800683 76800731 -18471920 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1170 270 289 42 34 chr17 76800741 76800859 -18471792 - Lx8 LINE L1 -352 7121 7003 3 1170 243 293 122 0 chr17 76800885 76801008 -18471643 + L1MC2 LINE L1 6101 6238 -106 3 1170 21 36 0 0 chr17 76801740 76801768 -18470883 + AT_rich Low_complexity Low_complexity 1 28 0 3 1170 225 0 0 0 chr17 76801768 76801793 -18470858 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1170 297 0 0 0 chr17 76802294 76802327 -18470324 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1170 441 0 0 0 chr17 76803380 76803429 -18469222 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1170 198 219 0 0 chr17 76803431 76803495 -18469156 + GA-rich Low_complexity Low_complexity 1 64 0 3 1170 687 69 0 0 chr17 76803522 76803624 -18469027 + (GA)n Simple_repeat Simple_repeat 1 102 0 3 1170 246 95 0 0 chr17 76804088 76804130 -18468521 + (T)n Simple_repeat Simple_repeat 1 42 0 3 1170 25 0 0 0 chr17 76805444 76805469 -18467182 + AT_rich Low_complexity Low_complexity 1 25 0 3 1170 293 372 107 51 chr17 76806090 76806558 -18466093 + L2 LINE L2 1142 1635 -1784 3 1170 678 202 4 0 chr17 76807310 76807549 -18465102 + (TG)n Simple_repeat Simple_repeat 1 240 0 3 1170 687 252 20 13 chr17 76807551 76807704 -18464947 - RSINE1 SINE B4 0 165 12 3 1170 462 18 0 0 chr17 76807972 76808027 -18464624 + (TG)n Simple_repeat Simple_repeat 1 55 0 3 146 934 175 38 5 chr17 76808105 76808289 -18464362 - URR1B DNA MER1_type 0 225 36 3 1171 189 306 50 36 chr17 76808839 76808993 -18463658 - MIRb SINE MIR -2 260 109 3 1171 498 83 0 0 chr17 76809731 76809803 -18462848 + (TG)n Simple_repeat Simple_repeat 1 72 0 3 1171 350 253 9 95 chr17 76811606 76811711 -18460940 + B1F SINE Alu 13 108 -41 3 1171 1578 61 0 0 chr17 76812561 76812889 -18459762 + (TTC)n Simple_repeat Simple_repeat 1 328 0 3 1171 1057 92 0 0 chr17 76812915 76813056 -18459595 - B1_Mm SINE Alu -5 142 2 3 1171 637 132 8 8 chr17 76813394 76813524 -18459127 + Lx3A LINE L1 6850 6979 -2 3 1171 423 0 0 0 chr17 76813647 76813694 -18458957 + (TC)n Simple_repeat Simple_repeat 1 47 0 3 1171 540 274 6 70 chr17 76813707 76813864 -18458787 - B1_Mm SINE Alu 0 147 1 3 1171 2551 194 70 11 chr17 76814519 76815062 -18457589 - RMER15 LTR ERVL 0 575 1 3 1171 333 315 39 39 chr17 76816786 76816941 -18455710 - B4 SINE B4 -130 162 8 3 1171 189 0 0 0 chr17 76819776 76819797 -18452854 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1171 230 298 0 0 chr17 76820028 76820112 -18452539 + (CAGCC)n Simple_repeat Simple_repeat 5 88 0 4 1171 408 299 23 16 chr17 76820166 76820295 -18452356 - Lx9 LINE L1 -453 7191 7062 4 1171 21 71 0 0 chr17 76820295 76820337 -18452314 + AT_rich Low_complexity Low_complexity 1 42 0 4 1171 2041 219 111 0 chr17 76820338 76820869 -18451782 - Lx9 LINE L1 -1 7643 7054 4 1171 487 325 99 81 chr17 76822066 76822411 -18450240 - MLT1A0 LTR MaLR -7 358 8 4 1171 270 0 0 0 chr17 76823132 76823162 -18449489 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1171 4243 119 37 0 chr17 76823520 76824167 -18448484 - Lx LINE L1 0 6654 5984 4 1171 296 263 158 20 chr17 76824804 76824905 -18447746 + ID_B1 SINE B4 11 125 -99 4 1171 216 0 0 0 chr17 76825071 76825095 -18447556 + (CAA)n Simple_repeat Simple_repeat 1 24 0 4 1171 2648 105 16 0 chr17 76825096 76825478 -18447173 - Lx LINE L1 -657 5997 5610 4 1171 3962 174 18 17 chr17 76825477 76826242 -18446409 + L1_Mm LINE L1 4803 5568 -315 4 1171 450 0 0 0 chr17 76826779 76826829 -18445822 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1171 428 356 132 18 chr17 76827440 76827712 -18444939 + LTR16A LTR ERVL 121 423 -28 4 1171 312 330 57 83 chr17 76827846 76828110 -18444541 - MLT1E LTR MaLR -13 640 384 4 1171 1748 242 37 76 chr17 76828133 76828670 -18443981 + Lx5 LINE L1 6531 7046 -4 4 1171 375 310 0 0 chr17 76829374 76829461 -18443190 + B3A SINE B2 32 118 -80 4 1171 5151 70 13 66 chr17 76829493 76830267 -18442384 + L1Md_F2 LINE L1 5846 6578 -4 4 1171 642 287 77 0 chr17 76831361 76831556 -18441095 + B3 SINE B2 2 211 -5 4 1171 230 241 0 18 chr17 76831706 76831761 -18440890 + CT-rich Low_complexity Low_complexity 3 56 0 4 1171 333 68 0 0 chr17 76831862 76831906 -18440745 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1171 525 32 0 0 chr17 76831939 76832002 -18440649 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1171 38 22 0 0 chr17 76832103 76832148 -18440503 + AT_rich Low_complexity Low_complexity 1 45 0 4 1171 251 307 11 64 chr17 76833014 76833108 -18439543 - MIRc SINE MIR -69 199 111 4 1171 1145 48 7 20 chr17 76834910 76835060 -18437591 - B1_Mus1 SINE Alu 0 148 1 4 1171 22 0 0 0 chr17 76836712 76836734 -18435917 + AT_rich Low_complexity Low_complexity 1 22 0 4 1171 455 333 74 76 chr17 76836859 76837321 -18435330 - L1M5 LINE L1 -2596 3550 3090 4 1171 21 0 0 0 chr17 76837841 76837862 -18434789 + AT_rich Low_complexity Low_complexity 1 21 0 4 1171 3933 152 70 15 chr17 76839008 76839750 -18432901 - Lx LINE L1 -8 6646 5864 4 1171 5194 117 30 0 chr17 76839752 76841115 -18431536 - L1VL2 LINE L1 -1890 1725 314 4 1171 299 25 25 0 chr17 76841647 76841687 -18430964 + (TTTTG)n Simple_repeat Simple_repeat 5 45 0 4 1171 248 327 41 11 chr17 76841687 76841761 -18430890 - ID4 SINE ID -79 73 5 4 1171 279 0 0 0 chr17 76841886 76841917 -18430734 + (TCTA)n Simple_repeat Simple_repeat 3 33 0 4 1171 216 253 0 0 chr17 76841968 76842043 -18430608 + (TA)n Simple_repeat Simple_repeat 2 76 0 4 1171 351 0 0 0 chr17 76842064 76842103 -18430548 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1171 665 355 91 3 chr17 76842458 76842789 -18429862 - MLT1A0 LTR MaLR -5 360 1 4 1171 308 349 0 0 chr17 76842812 76842921 -18429730 + ID_B1 SINE B4 116 224 0 4 1171 405 0 0 0 chr17 76844042 76844087 -18428564 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1171 675 0 0 0 chr17 76844087 76844161 -18428490 + (GA)n Simple_repeat Simple_repeat 2 76 0 4 1171 1068 250 34 31 chr17 76846675 76846997 -18425654 + RLTR15 LTR ERVK 1 323 -36 4 1171 2898 164 21 8 chr17 76847058 76847575 -18425076 - RLTR12B LTR ERVK -2 526 3 4 1171 1886 234 50 8 chr17 76847582 76847978 -18424673 - MTC LTR MaLR -8 413 1 4 1171 1929 276 102 15 chr17 76848812 76849390 -18423261 - Lx6 LINE L1 -4 7456 6829 4 1171 1458 188 43 4 chr17 76849390 76849668 -18422983 + ORR1B1 LTR MaLR 106 394 0 4 1171 336 136 17 0 chr17 76849668 76849727 -18422924 - L1_Mur3 LINE L1 -3365 2515 2456 4 1171 318 197 13 38 chr17 76849759 76849838 -18422813 - L1_Mur3 LINE L1 -3411 2469 2383 4 1171 1384 114 49 26 chr17 76851723 76851949 -18420702 - Lx3_Mus LINE L1 -946 6063 5833 4 1171 763 158 7 46 chr17 76851938 76852091 -18420560 + Lx3_Mus LINE L1 6068 6214 -795 4 1171 909 112 87 27 chr17 76852091 76852274 -18420377 + Lx3_Mus LINE L1 6815 7008 -1 4 1171 257 382 29 39 chr17 76852480 76852687 -18419964 - LTR16A LTR ERVL -23 428 224 4 1171 217 364 68 0 chr17 76852861 76852949 -18419702 - PB1D9 SINE Alu -26 94 1 4 1171 834 294 113 18 chr17 76854513 76854839 -18417812 + MER54A LTR ERVL 543 899 -2 4 1171 239 275 109 45 chr17 76856185 76856292 -18416359 + MER110A LTR ERV1 203 318 -150 4 1171 267 31 0 0 chr17 76856292 76856324 -18416327 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 4 1171 239 275 109 45 chr17 76856324 76856372 -18416279 + MER110A LTR ERV1 319 367 -101 4 1171 217 373 0 0 chr17 76856563 76856630 -18416021 - MIR SINE MIR -167 95 29 4 1171 205 116 44 44 chr17 76857272 76857317 -18415334 + T-rich Low_complexity Low_complexity 1 45 0 4 1171 4768 66 9 17 chr17 76857355 76858002 -18414649 - L1_Mus2 LINE L1 -1 6565 5924 4 1171 468 0 0 0 chr17 76858339 76858391 -18414260 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 1171 534 57 0 0 chr17 76858391 76858460 -18414191 + (CA)n Simple_repeat Simple_repeat 1 70 0 4 1171 594 340 28 14 chr17 76859159 76859445 -18413206 - B4A SINE B4 -2 290 1 4 1171 39 38 0 0 chr17 76859589 76859642 -18413009 + AT_rich Low_complexity Low_complexity 1 53 0 4 1171 1031 228 42 49 chr17 76859680 76860047 -18412604 - Lx7 LINE L1 -12 7684 7107 4 1171 485 270 59 36 chr17 76860199 76860418 -18412233 + RLTR15 LTR ERVK 59 282 -77 4 1171 4170 242 57 18 chr17 76860487 76861594 -18411057 - Lx7 LINE L1 -347 7349 6200 4 1171 397 236 9 0 chr17 76861591 76861697 -18410954 - L1_Mur3 LINE L1 -1668 4212 4106 4 1171 6980 191 29 26 chr17 76861713 76862141 -18410510 - L1_Mur3 LINE L1 -2088 3792 3361 4 1171 1972 237 6 124 chr17 76862141 76862834 -18409817 - RMER19C LTR ERVK 0 611 1 4 1171 6980 211 62 24 chr17 76862834 76864598 -18408053 - L1_Mur3 LINE L1 -2520 3360 1345 4 1171 3130 231 59 82 chr17 76865630 76866657 -18405994 - L1_Mur3 LINE L1 -6384 1344 341 4 1171 192 125 0 0 chr17 76866758 76866790 -18405861 + (CATA)n Simple_repeat Simple_repeat 4 35 0 4 1171 186 103 0 0 chr17 76866823 76866852 -18405799 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1171 785 81 7 22 chr17 76866885 76867024 -18405627 + (TCTA)n Simple_repeat Simple_repeat 3 139 0 4 1171 339 237 0 81 chr17 76867073 76867197 -18405454 - L1MD LINE L1 -1890 4256 4143 4 1171 38 75 0 0 chr17 76869037 76869117 -18403534 + AT_rich Low_complexity Low_complexity 1 80 0 4 1171 22 0 0 0 chr17 76869890 76869912 -18402739 + AT_rich Low_complexity Low_complexity 1 22 0 4 1171 279 330 46 120 chr17 76871509 76871726 -18400925 - ORR1E LTR MaLR -149 210 10 4 1171 1405 278 22 12 chr17 76872784 76873377 -18399274 - Lx7 LINE L1 -1605 6091 5485 4 1171 2683 198 37 9 chr17 76873377 76873472 -18399179 - RLTR20B2 LTR ERVK 0 560 465 4 1171 261 0 0 0 chr17 76873472 76873501 -18399150 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1171 2683 198 37 9 chr17 76873501 76873950 -18398701 - RLTR20B2 LTR ERVK -96 464 1 4 1171 755 243 16 0 chr17 76873952 76874137 -18398514 - Lx7 LINE L1 -392 5488 5301 4 1171 681 276 154 63 chr17 76875375 76875661 -18396990 + MTD LTR MaLR 21 345 -74 4 1171 3557 98 6 15 chr17 76875661 76876179 -18396472 - L1_Mus3 LINE L1 0 6638 6126 4 1171 681 276 154 63 chr17 76876179 76876256 -18396395 + MTD LTR MaLR 346 417 -2 4 1171 693 209 0 0 chr17 76876391 76876544 -18396107 + CT-rich Low_complexity Low_complexity 4 156 0 4 1171 30 45 0 0 chr17 76878446 76878490 -18394161 + AT_rich Low_complexity Low_complexity 1 44 0 4 1171 2249 319 95 23 chr17 76878701 76879888 -18392763 - Lx8 LINE L1 -19 7454 6182 4 1171 875 283 50 45 chr17 76880264 76880651 -18392000 - Lx8 LINE L1 -1668 5976 5552 4 1171 39 38 0 0 chr17 76880651 76880704 -18391947 + AT_rich Low_complexity Low_complexity 1 53 0 4 1171 303 304 59 8 chr17 76880728 76880905 -18391746 - Lx8 LINE L1 -331 5552 5351 4 1171 872 304 57 3 chr17 76880942 76881275 -18391376 - Lx9 LINE L1 -272 7372 7022 4 1171 332 283 19 16 chr17 76881282 76881477 -18391174 - L1_Rod LINE L1 -769 5374 5147 4 1171 940 104 17 0 chr17 76881682 76881855 -18390796 + (TTTC)n Simple_repeat Simple_repeat 4 179 0 4 1171 225 0 0 0 chr17 76881855 76881880 -18390771 + (TCTG)n Simple_repeat Simple_repeat 1 25 0 4 1171 993 136 0 0 chr17 76881880 76882057 -18390594 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 4 1171 21 36 0 0 chr17 76883283 76883311 -18389340 + AT_rich Low_complexity Low_complexity 1 28 0 4 1171 323 372 44 0 chr17 76883957 76884094 -18388557 + MER57C2 LTR ERV1 48 190 -244 4 1171 272 290 68 68 chr17 76884815 76884965 -18387686 - L2a LINE L2 -295 3131 2979 4 1171 2420 157 12 5 chr17 76886646 76887056 -18385595 - RMER19B LTR ERVK 0 902 490 4 1171 1546 229 107 6 chr17 76887643 76888117 -18384534 + RMER1C Other Other 821 1342 0 4 1171 2616 97 11 3 chr17 76888465 76888829 -18383822 - L1_Mus4 LINE L1 -469 6167 5801 4 1171 3574 99 4 2 chr17 76888831 76889329 -18383322 + L1_Mus4 LINE L1 6133 6631 -5 4 1171 373 217 120 17 chr17 76889795 76889923 -18382728 + ORR1B1 LTR MaLR 1 166 -228 4 1171 928 36 0 0 chr17 76889924 76890034 -18382617 - Lx3_Mus LINE L1 -550 6459 6350 4 1171 1521 126 19 83 chr17 76890027 76890339 -18382312 + Lx3_Mus LINE L1 6039 6330 -679 4 1171 493 193 0 0 chr17 76890357 76890445 -18382206 - Lx2B LINE L1 -702 6298 6211 4 1171 244 146 55 0 chr17 76890441 76890496 -18382155 + Lx2B LINE L1 6349 6406 -594 4 1171 1177 234 183 13 chr17 76890493 76890807 -18381844 + Lx2B LINE L1 6548 6927 -73 4 1171 274 23 47 0 chr17 76890807 76890850 -18381801 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 4 1171 1177 234 183 13 chr17 76890850 76890917 -18381734 + Lx2B LINE L1 6928 6994 -6 4 1171 21 0 0 0 chr17 76892867 76892888 -18379763 + AT_rich Low_complexity Low_complexity 1 21 0 4 1171 3707 75 0 4 chr17 76893037 76893687 -18378964 - L1_Mus1 LINE L1 -549 6018 5371 4 1171 1265 61 144 0 chr17 76893687 76893867 -18378784 + L1_Mus1 LINE L1 6362 6567 0 4 1171 588 53 0 0 chr17 76894047 76894123 -18378528 + (GAGAA)n Simple_repeat Simple_repeat 3 78 0 4 1171 183 244 25 37 chr17 76894438 76894519 -18378132 + L3 LINE CR1 1389 1468 -3021 4 1171 393 95 0 0 chr17 76895184 76895247 -18377404 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1171 559 269 104 63 chr17 76896151 76896421 -18376230 + B4A SINE B4 4 284 -8 4 1171 251 93 23 0 chr17 76897241 76897284 -18375367 + (GAAA)n Simple_repeat Simple_repeat 3 46 0 4 1171 448 308 103 29 chr17 76897426 76897777 -18374874 + L1MC4 LINE L1 943 1319 -4896 5 1171 1395 160 11 71 chr17 76898101 76898384 -18374267 + ORR1A4 LTR MaLR 1 266 -63 5 1171 2905 157 72 49 chr17 76898837 76899004 -18373647 - RLTR13D6 LTR ERVK 0 902 750 5 1171 1886 31 0 0 chr17 76899004 76899229 -18373422 - L1Md_A LINE L1 0 6582 6358 5 1171 2905 157 72 49 chr17 76899229 76899672 -18372979 - RLTR13D6 LTR ERVK -153 749 278 5 1171 2340 123 16 26 chr17 76899686 76900070 -18372581 - RLTR13D6 LTR ERVK -522 380 1 5 1171 1028 149 20 46 chr17 76900071 76900268 -18372383 + URR1A DNA MER1_type 35 226 0 5 1171 433 290 35 57 chr17 76900268 76900314 -18372337 - CYRA11_Mm Unknown Y-chromosome -453 164 124 5 1171 1375 196 8 104 chr17 76901341 76901637 -18371014 - RLTR11B LTR ERVK -4 449 191 5 1171 771 59 0 0 chr17 76901637 76901738 -18370913 + (TC)n Simple_repeat Simple_repeat 1 101 0 5 1171 1375 196 8 104 chr17 76901738 76901805 -18370846 - RLTR11B LTR ERVK -263 190 122 5 1171 5119 160 29 16 chr17 76901838 76902790 -18369861 - Lx2 LINE L1 0 6997 6033 5 1171 753 164 0 50 chr17 76902797 76902938 -18369713 - RLTR11B LTR ERVK -319 134 1 5 1171 3256 112 12 16 chr17 76903212 76903710 -18368941 + Lx LINE L1 6154 6649 -5 5 1171 8336 148 25 6 chr17 76905113 76906491 -18366160 - Lx2 LINE L1 0 6997 5594 5 1171 4599 179 11 1 chr17 76906469 76907303 -18365348 + Lx2 LINE L1 4738 5579 -304 5 1171 22 35 0 0 chr17 76907893 76907922 -18364729 + AT_rich Low_complexity Low_complexity 1 29 0 5 1171 1094 243 41 50 chr17 76907922 76908242 -18364409 - Lx4B LINE L1 -9 7049 6733 5 1171 7209 64 31 4 chr17 76908267 76909401 -18363250 - L1Md_F2 LINE L1 0 6582 5414 5 1171 5816 74 1 58 chr17 76909399 76910259 -18362392 + L1Md_F2 LINE L1 4572 5382 -501 5 1171 2780 233 68 3 chr17 76910255 76910904 -18361747 - Lx5 LINE L1 -336 6714 6024 5 1171 7327 78 4 10 chr17 76910965 76912001 -18360650 - L1_Mus2 LINE L1 0 6566 5532 5 1171 2183 84 60 17 chr17 76912001 76912353 -18360298 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1171 55030 29 9 2 chr17 76912353 76918779 -18353872 + IAPEz-int LTR ERVK 8 6479 -2 5 1171 2208 81 60 17 chr17 76918781 76919133 -18353518 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1171 4526 83 5 0 chr17 76919133 76919756 -18352895 - L1_Mus2 LINE L1 -346 5537 4912 5 1171 229 207 122 0 chr17 76919804 76919886 -18352765 - L1M3 LINE L1 -3304 2836 2745 5 1171 22 56 0 0 chr17 76919956 76919992 -18352659 + AT_rich Low_complexity Low_complexity 1 36 0 5 1171 22 80 0 0 chr17 76920145 76920195 -18352456 + AT_rich Low_complexity Low_complexity 1 50 0 5 1171 302 0 26 0 chr17 76920199 76920237 -18352414 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1171 22 35 0 0 chr17 76920706 76920735 -18351916 + AT_rich Low_complexity Low_complexity 1 29 0 5 1171 302 326 0 0 chr17 76920887 76920976 -18351675 + PB1D10 SINE Alu 27 115 -2 5 1171 5629 115 45 5 chr17 76921120 76922798 -18349853 - L1VL2 LINE L1 -1789 1826 78 5 1171 3405 172 1 1 chr17 76922805 76923566 -18349085 - Lx5 LINE L1 -1015 6035 5269 5 1171 25 0 0 0 chr17 76923566 76923591 -18349060 + AT_rich Low_complexity Low_complexity 1 25 0 5 1171 233 89 22 0 chr17 76923655 76923700 -18348951 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 1171 22 56 0 0 chr17 76923809 76923845 -18348806 + AT_rich Low_complexity Low_complexity 1 36 0 5 1171 22 0 0 0 chr17 76923979 76924001 -18348650 + AT_rich Low_complexity Low_complexity 1 22 0 5 1171 3252 181 25 1 chr17 76924002 76924650 -18348001 - Lx5 LINE L1 -1869 4008 3346 5 1171 22 0 0 0 chr17 76925189 76925211 -18347440 + AT_rich Low_complexity Low_complexity 1 22 0 5 1171 3099 200 20 35 chr17 76925436 76926308 -18346343 + Lx5 LINE L1 5183 6059 -991 5 1171 2537 265 39 27 chr17 76926312 76927013 -18345638 + Lx5 LINE L1 6330 7038 -12 5 1171 631 308 5 0 chr17 76927666 76927880 -18344771 + B3 SINE B2 2 216 0 5 1171 210 400 0 0 chr17 76927885 76927960 -18344691 + B3 SINE B2 3 77 -139 5 1171 396 0 0 0 chr17 76927997 76928041 -18344610 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1171 1317 251 26 154 chr17 76929050 76929713 -18342938 + Lx7 LINE L1 7119 7696 0 5 1171 2305 141 5 0 chr17 76929968 76930372 -18342279 - L1VL4 LINE L1 -449 3110 2705 5 1171 6001 104 11 54 chr17 76930373 76931098 -18341553 - L1VL4 LINE L1 -1696 1863 1151 5 1171 678 243 49 22 chr17 76931098 76931239 -18341412 + B3A SINE B2 5 153 -45 5 1171 558 29 0 0 chr17 76931239 76931307 -18341344 + (TG)n Simple_repeat Simple_repeat 2 69 0 5 1171 678 243 49 22 chr17 76931307 76931350 -18341301 + B3A SINE B2 154 194 -4 5 1171 6001 176 38 33 chr17 76931350 76932360 -18340291 - L1VL4 LINE L1 -2409 1150 156 5 1171 658 326 10 17 chr17 76932498 76932791 -18339860 - Lx9 LINE L1 -445 7199 6909 5 1171 712 256 6 23 chr17 76933060 76933228 -18339423 - MTD LTR MaLR -1 418 254 5 1171 400 278 179 62 chr17 76933228 76933519 -18339132 - RLTR22_Mur LTR ERVK 0 1848 1524 5 1171 1221 106 0 0 chr17 76933555 76933735 -18338916 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 5 1171 455 139 40 0 chr17 76933740 76933841 -18338810 + GA-rich Low_complexity Low_complexity 1 105 0 5 1171 5590 118 14 2 chr17 76933978 76934834 -18337817 - Lx3_Mus LINE L1 -10 6999 6134 5 1171 3115 234 22 29 chr17 76934930 76935760 -18336891 - RLTR22_Mur LTR ERVK -1024 824 1 5 1171 713 289 68 5 chr17 76935760 76935991 -18336660 - MTD LTR MaLR -164 257 2 5 1171 21 71 0 0 chr17 76936813 76936855 -18335796 + AT_rich Low_complexity Low_complexity 1 42 0 5 1171 253 276 13 0 chr17 76937712 76937788 -18334863 + (CATATA)n Simple_repeat Simple_repeat 1 77 0 5 1171 440 258 0 7 chr17 76937828 76937980 -18334671 + (CATATA)n Simple_repeat Simple_repeat 4 154 0 5 1171 238 356 34 8 chr17 76938040 76938159 -18334492 - Charlie9 DNA MER1_type -2629 128 7 5 1172 408 217 124 130 chr17 76940216 76940401 -18332250 + B3A SINE B2 2 185 -10 5 1172 393 22 0 0 chr17 76940999 76941045 -18331606 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 5 1172 960 97 8 0 chr17 76941287 76941421 -18331230 + B1_Mus1 SINE Alu 1 135 -13 5 1172 252 0 0 0 chr17 76941421 76941449 -18331202 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 5 1172 212 0 36 0 chr17 76941949 76941977 -18330674 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1172 3652 137 35 11 chr17 76942147 76942754 -18329897 + Lx3A LINE L1 6354 6974 -7 5 1172 324 0 0 0 chr17 76942761 76942797 -18329854 + (TAA)n Simple_repeat Simple_repeat 1 36 0 5 1172 1564 290 12 60 chr17 76944276 76944838 -18327813 - Lx6 LINE L1 -26 7434 6543 5 1172 886 41 8 8 chr17 76945707 76945831 -18326820 + (TTTC)n Simple_repeat Simple_repeat 1 124 0 5 1172 451 296 135 6 chr17 76945948 76946118 -18326533 - MLT1A0 LTR MaLR -6 359 168 5 1172 6860 125 67 9 chr17 76946301 76947454 -18325197 - Lx2 LINE L1 -1 6996 5777 5 1172 2517 152 51 0 chr17 76947454 76947882 -18324769 + L1_Mm LINE L1 5425 5874 -9 5 1172 21 36 0 0 chr17 76947935 76947963 -18324688 + AT_rich Low_complexity Low_complexity 1 28 0 5 1172 356 326 78 47 chr17 76948001 76948233 -18324418 + L1M2 LINE L1 4810 5048 -1095 5 1172 293 237 52 0 chr17 76948336 76948433 -18324218 + L1M2 LINE L1 5653 5754 -426 5 1172 210 37 0 0 chr17 76948687 76948714 -18323937 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 5 1172 1120 69 7 0 chr17 76948726 76948871 -18323780 - B1_Mus1 SINE Alu -1 147 2 5 1172 2871 168 1 2 chr17 76949073 76949635 -18323016 - Lx2B LINE L1 -926 6074 5516 5 1172 247 169 17 17 chr17 76949639 76949699 -18322952 + (TATAA)n Simple_repeat Simple_repeat 5 64 0 5 1172 450 53 0 0 chr17 76949745 76949802 -18322849 + (GA)n Simple_repeat Simple_repeat 1 57 0 5 1172 610 310 53 109 chr17 76950378 76950682 -18321969 + RLTR26 LTR ERVK 131 417 -225 5 1172 234 150 0 0 chr17 76951000 76951040 -18321611 + (GGAGAA)n Simple_repeat Simple_repeat 3 42 0 5 1172 396 378 84 44 chr17 76951144 76951487 -18321164 + L1MCc LINE L1 199 555 -5868 5 1172 438 335 58 42 chr17 76952323 76952513 -18320138 + MLT1A1 LTR MaLR 214 406 -2 5 1172 21 82 0 0 chr17 76953878 76953927 -18318724 + AT_rich Low_complexity Low_complexity 1 49 0 5 1172 1103 156 102 0 chr17 76954192 76954397 -18318254 + URR1A DNA MER1_type 1 226 0 5 1172 622 306 66 58 chr17 76956332 76956606 -18316045 + RLTR16 LTR ERVK 4 279 -226 5 1172 1042 271 77 26 chr17 76956999 76957451 -18315200 - Lx9 LINE L1 -11 7633 7159 5 1172 2120 243 78 22 chr17 76957400 76957629 -18315022 + Lx9 LINE L1 6606 6843 -801 5 1172 402 39 0 0 chr17 76957629 76957681 -18314970 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 5 1172 2120 243 78 22 chr17 76957681 76958044 -18314607 + Lx9 LINE L1 6844 7230 -414 5 1172 446 350 38 55 chr17 76959056 76959292 -18313359 + MLT1A LTR MaLR 108 339 -35 5 1172 529 267 20 20 chr17 76960204 76960357 -18312294 + MIRb SINE MIR 95 247 -21 5 1172 748 294 68 52 chr17 76961320 76961997 -18310654 + L1_Mur3 LINE L1 888 1586 -4294 5 1172 370 105 0 0 chr17 76962047 76962104 -18310547 + B1_Mus1 SINE Alu 1 57 -91 5 1172 1203 164 13 4 chr17 76963312 76963544 -18309107 - Lx LINE L1 -9 6645 6412 5 1172 5681 151 13 9 chr17 76963544 76964554 -18308097 + L1_Mur2 LINE L1 4149 5162 -715 5 1172 546 16 0 0 chr17 76964968 76965031 -18307620 + (TC)n Simple_repeat Simple_repeat 1 63 0 5 1172 311 0 26 0 chr17 76965156 76965195 -18307456 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1172 340 229 61 20 chr17 76965365 76965463 -18307188 + MTEa LTR MaLR 3 104 -275 5 1172 2318 107 35 3 chr17 76965463 76965809 -18306842 + IAPEY2_LTR LTR ERVK 1 357 0 5 1172 2380 135 74 23 chr17 76965810 76966241 -18306410 + IAPEy-int LTR ERVK 2 454 -7059 5 1172 962 145 247 29 chr17 76966656 76967063 -18305588 + IAPEy-int LTR ERVK 409 945 -6636 5 1172 1668 177 107 50 chr17 76967169 76967650 -18305001 + IAPEy-int LTR ERVK 251 819 -4587 5 1172 437 198 112 0 chr17 76967652 76967768 -18304883 + IAPEy-int LTR ERVK 1721 1849 -5557 5 1172 293 267 0 55 chr17 76967779 76967870 -18304781 + IAPEy-int LTR ERVK 2454 2539 -4867 5 1172 659 202 0 0 chr17 76967882 76968001 -18304650 + IAPEy-int LTR ERVK 2635 2753 -4653 5 1172 425 71 0 0 chr17 76968027 76968083 -18304568 + IAPEy-int LTR ERVK 3567 3622 -3784 5 1172 548 71 47 75 chr17 76968082 76968189 -18304462 + IAPEy-int LTR ERVK 4567 4670 -2911 5 1172 3273 85 0 16 chr17 76968453 76968883 -18303768 + IAPEy-int LTR ERVK 5204 5626 -1955 5 1172 3453 77 0 5 chr17 76968886 76969330 -18303321 + IAPEy-int LTR ERVK 5773 6214 -1367 5 1172 5392 99 5 20 chr17 76969320 76970111 -18302540 + IAPEy-int LTR ERVK 6735 7513 0 5 1172 2414 106 23 3 chr17 76970111 76970461 -18302190 + IAPEY2_LTR LTR ERVK 1 357 0 5 1172 743 339 79 8 chr17 76970461 76970562 -18302089 + MTEa LTR MaLR 99 208 -171 5 1172 450 0 0 0 chr17 76970562 76970612 -18302039 + (TC)n Simple_repeat Simple_repeat 2 51 0 5 1172 743 339 79 8 chr17 76970612 76970763 -18301888 + MTEa LTR MaLR 209 368 -11 5 1172 223 276 40 0 chr17 76971959 76972035 -18300616 + (CATG)n Simple_repeat Simple_repeat 2 80 0 5 1172 510 248 67 8 chr17 76972096 76972230 -18300421 - B1F SINE Alu -5 144 3 5 1172 694 330 98 68 chr17 76972820 76973249 -18299402 - MLT2B2 LTR ERVL 0 515 74 5 1172 349 303 65 33 chr17 76974235 76974419 -18298232 + MER110A LTR ERV1 132 321 -147 5 1172 387 291 89 128 chr17 76974433 76974859 -18297792 + MTD LTR MaLR 13 405 -14 5 1172 7721 160 42 91 chr17 76976104 76976561 -18296090 + RLTR21 LTR ERVK 1 471 -1101 5 1172 1105 95 11 16 chr17 76976561 76976743 -18295908 - L1Md_F2 LINE L1 -1 6581 6401 5 1172 7721 160 42 91 chr17 76976743 76977326 -18295325 + RLTR21 LTR ERVK 472 1065 -507 5 1172 339 25 0 0 chr17 76977326 76977366 -18295285 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1172 7721 160 42 91 chr17 76977366 76977976 -18294675 + RLTR21 LTR ERVK 1066 1571 -1 5 1172 213 132 0 0 chr17 76978188 76978226 -18294425 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1172 1241 323 84 62 chr17 76978762 76979019 -18293632 + Lx7 LINE L1 6473 6720 -976 5 1172 207 0 0 0 chr17 76979019 76979042 -18293609 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1172 1241 323 84 62 chr17 76979042 76979606 -18293045 + Lx7 LINE L1 6721 7312 -384 5 1172 546 16 0 0 chr17 76979617 76979680 -18292971 + (TC)n Simple_repeat Simple_repeat 1 63 0 6 1172 198 0 0 0 chr17 76979682 76979704 -18292947 + (CA)n Simple_repeat Simple_repeat 2 23 0 6 1172 894 106 0 0 chr17 76979707 76979839 -18292812 + (GA)n Simple_repeat Simple_repeat 1 132 0 6 1172 245 227 61 0 chr17 76979891 76979957 -18292694 + Lx7 LINE L1 7615 7684 -12 6 1172 267 364 0 0 chr17 76980336 76980402 -18292249 + B1F SINE Alu 14 79 -70 6 1172 566 288 27 7 chr17 76980433 76980580 -18292071 - RSINE1 SINE B4 -12 153 4 6 1172 21 0 0 0 chr17 76980772 76980793 -18291858 + AT_rich Low_complexity Low_complexity 1 21 0 6 1172 376 316 0 20 chr17 76981273 76981373 -18291278 + RSINE1 SINE B4 43 140 -25 6 1172 784 75 25 0 chr17 76981374 76981494 -18291157 + (CATA)n Simple_repeat Simple_repeat 3 125 0 6 1172 668 71 10 0 chr17 76981500 76981599 -18291052 + (TC)n Simple_repeat Simple_repeat 1 100 0 6 1172 2170 80 0 0 chr17 76982037 76982311 -18290340 - L1_Mm LINE L1 -163 5720 5447 6 1172 13130 26 0 0 chr17 76982306 76984531 -18288120 - L1Md_T LINE L1 0 6582 4358 6 1172 1247 54 18 6 chr17 76984527 76984696 -18287955 - L1_Mm LINE L1 -435 5448 5278 6 1172 6483 75 0 19 chr17 76984696 76984745 -18287906 + L1Md_F2 LINE L1 5715 5757 -825 6 1172 1223 240 22 9 chr17 76984745 76985061 -18287590 - RLTR46 LTR ERVK 0 320 1 6 1172 6483 75 0 19 chr17 76985061 76985886 -18286765 + L1Md_F2 LINE L1 5758 6572 -10 6 1172 270 350 118 7 chr17 76986488 76986632 -18286019 + MER45A DNA Tip100 2 161 -17 6 1172 4119 55 24 4 chr17 76987579 76988111 -18284540 - L1Md_F2 LINE L1 -3 6579 6037 6 1172 282 293 75 57 chr17 76988131 76988290 -18284361 + RSINE1 SINE B4 4 165 0 6 1172 450 0 0 0 chr17 76988292 76988342 -18284309 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 6 1172 566 250 148 35 chr17 76989321 76989524 -18283127 - URR1A DNA MER1_type 0 226 1 6 1172 2182 192 43 7 chr17 76990629 76991069 -18281582 - Lx4A LINE L1 -11 7047 6592 6 1172 23 0 0 0 chr17 76991123 76991146 -18281505 + AT_rich Low_complexity Low_complexity 1 23 0 6 1172 213 404 57 52 chr17 76991385 76991615 -18281036 + L2c LINE L2 3137 3367 -20 6 1172 419 289 98 22 chr17 76992746 76992930 -18279721 + MTEb LTR MaLR 153 350 -29 6 1172 287 305 40 48 chr17 76992939 76993063 -18279588 - B3A SINE B2 -6 192 70 6 1172 457 309 29 7 chr17 76993285 76993422 -18279229 - B3A SINE B2 -57 141 2 6 1172 6387 125 47 7 chr17 76993482 76994487 -18278164 - Lx LINE L1 -6 6648 5604 6 1172 723 207 201 0 chr17 76994508 76994687 -18277964 + B3 SINE B2 2 216 0 6 1172 463 275 18 97 chr17 76994723 76994888 -18277763 + B3A SINE B2 47 198 0 6 1172 8868 94 17 5 chr17 76994938 76996932 -18275719 - L1_Mus1 LINE L1 -1 6566 4543 6 1172 275 59 75 38 chr17 76996915 76996968 -18275683 + L1M3 LINE L1 4561 4615 -1525 6 1172 3749 122 148 17 chr17 76996974 76997672 -18274979 - Lx3A LINE L1 -6 6975 6187 6 1172 236 324 28 127 chr17 76997677 76997870 -18274781 + MER31B LTR ERV1 193 365 -101 6 1172 603 60 0 0 chr17 76997870 76997954 -18274697 + (TC)n Simple_repeat Simple_repeat 1 84 0 6 1172 236 324 28 127 chr17 76997954 76997972 -18274679 + MER31B LTR ERV1 366 383 -83 6 1172 363 186 61 117 chr17 76998311 76998448 -18274203 - MTEa LTR MaLR -8 371 241 6 1172 291 54 0 0 chr17 76998471 76998508 -18274143 + (A)n Simple_repeat Simple_repeat 1 37 0 6 1172 477 338 41 55 chr17 76998513 76998732 -18273919 - MTEa LTR MaLR -163 216 1 6 1172 1267 201 57 0 chr17 77000000 77000264 -18272387 - Lx7 LINE L1 -670 7026 6748 1 1172 4645 235 49 100 chr17 77000472 77001062 -18271589 - Lx2B LINE L1 -10 6990 6362 2 1172 576 0 0 0 chr17 77001062 77001126 -18271525 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 3 1172 653 146 0 0 chr17 77001127 77001223 -18271428 - B1_Mus2 SINE Alu -13 134 39 4 1172 321 219 47 47 chr17 77001154 77001240 -18271411 - RLTR25B LTR ERVK -521 507 422 5 1172 4645 235 49 100 chr17 77001223 77001675 -18270976 - Lx2B LINE L1 -639 6360 5925 2 1172 3281 133 22 137 chr17 77001675 77002522 -18270129 + RMER17A LTR ERVK 2 751 0 6 1172 4645 235 49 100 chr17 77002522 77002836 -18269815 - Lx2B LINE L1 -1076 5924 5610 2 1172 3367 212 12 11 chr17 77002836 77003643 -18269008 - L1_Mur1 LINE L1 -3695 2191 1384 7 1172 2340 66 13 0 chr17 77003635 77003937 -18268714 - L1_Mus4 LINE L1 -140 6496 6191 8 1172 1730 220 55 66 chr17 77005466 77005527 -18267124 - Lx9 LINE L1 -6 7638 7579 9 1172 425 19 0 18 chr17 77005527 77005582 -18267069 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 1172 1730 220 55 66 chr17 77005582 77006066 -18266585 - Lx9 LINE L1 -66 7578 7099 9 1172 5122 54 12 1 chr17 77006225 77006863 -18265788 + L1Md_F2 LINE L1 5920 6564 -18 1 1172 372 94 0 0 chr17 77006863 77006916 -18265735 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 1172 5122 54 12 1 chr17 77006916 77006931 -18265720 + L1Md_F2 LINE L1 6565 6579 -3 1 1172 627 280 0 0 chr17 77007300 77007450 -18265201 + Lx8 LINE L1 6705 6854 -619 1 1172 668 150 66 29 chr17 77007453 77007590 -18265061 + B1_Mus1 SINE Alu 7 148 0 1 1172 37825 40 4 3 chr17 77007758 77013569 -18259082 + L1Md_T LINE L1 278 6192 -393 1 1172 1510 27 0 5 chr17 77013569 77013756 -18258895 + MT2_Mm LTR ERVL 295 480 -13 1 1172 2898 56 8 5 chr17 77013756 77014132 -18258519 + L1Md_T LINE L1 6208 6584 -1 1 1172 707 294 75 5 chr17 77014137 77014405 -18258246 + Lx8 LINE L1 7026 7332 -141 1 1172 302 264 11 0 chr17 77014426 77014517 -18258134 - Lx9 LINE L1 -11 7633 7542 1 1172 353 328 24 8 chr17 77014760 77014886 -18257765 + MER77 LTR ERVL 46 173 -434 1 1172 273 283 20 79 chr17 77015417 77015620 -18257031 + L1M4 LINE L1 3013 3203 -2943 1 1172 453 36 0 0 chr17 77015722 77015777 -18256874 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1172 529 325 140 31 chr17 77015972 77016229 -18256422 - B4A SINE B4 0 292 8 2 1172 36 53 0 0 chr17 77016620 77016677 -18255974 + AT_rich Low_complexity Low_complexity 1 57 0 2 1172 203 308 30 30 chr17 77017664 77017731 -18254920 - MIRb SINE MIR -186 82 16 2 1172 539 288 25 58 chr17 77018555 77018831 -18253820 + Lx6 LINE L1 7194 7460 0 2 1172 236 306 35 0 chr17 77020331 77020416 -18252235 + CT-rich Low_complexity Low_complexity 6 93 0 2 1172 273 314 9 37 chr17 77020468 77020577 -18252074 - PB1D10 SINE Alu -11 106 1 2 1172 375 346 12 89 chr17 77020962 77021130 -18251521 - B4 SINE B4 -2 290 136 2 1172 598 264 38 16 chr17 77021138 77021420 -18251231 + Lx9 LINE L1 5651 5965 -1679 2 1172 760 251 35 0 chr17 77021612 77021783 -18250868 - Lx4B LINE L1 -456 6602 6426 2 1172 952 276 103 9 chr17 77021797 77022126 -18250525 + Lx3C LINE L1 6615 6974 -2 3 1172 22 70 0 0 chr17 77024977 77025020 -18247631 + AT_rich Low_complexity Low_complexity 1 43 0 3 1172 352 390 30 51 chr17 77025241 77025438 -18247213 - MLT1G3 LTR MaLR -146 449 257 3 1172 234 102 0 71 chr17 77025424 77025466 -18247185 - Charlie11 DNA MER1_type -1231 965 927 3 1172 295 101 63 0 chr17 77026296 77026375 -18246276 + (TA)n Simple_repeat Simple_repeat 1 84 0 3 1172 339 92 46 0 chr17 77026443 77026508 -18246143 + (TA)n Simple_repeat Simple_repeat 2 69 0 3 1172 394 261 80 9 chr17 77026510 77026622 -18246029 + B3 SINE B2 96 215 -1 3 1172 317 332 54 54 chr17 77027284 77027507 -18245144 - L1ME3A LINE L1 -36 6137 5915 3 1172 486 214 6 22 chr17 77028296 77028478 -18244173 + GA-rich Low_complexity Low_complexity 2 180 0 3 1172 481 324 80 45 chr17 77029414 77029702 -18242949 + RMER5 LTR ERV1 217 514 -20 3 1172 228 237 128 121 chr17 77030228 77030377 -18242274 + MER67D LTR ERV1 40 189 -325 4 1172 231 324 75 99 chr17 77031066 77031159 -18241492 - LTR41 LTR ERVL -599 169 89 4 1172 255 61 0 0 chr17 77031159 77031192 -18241459 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 4 1172 231 324 75 99 chr17 77031192 77031259 -18241392 - LTR41 LTR ERVL -680 88 14 4 1172 620 291 9 33 chr17 77032255 77032468 -18240183 - ERVL-B4-int LTR ERVL -3089 2625 2418 4 1172 244 421 120 31 chr17 77033979 77034305 -18238346 - LTR16C LTR ERVL -2 487 133 4 1172 241 379 50 25 chr17 77034508 77034627 -18238024 + L2b LINE L2 3254 3375 0 4 1172 1720 32 36 22 chr17 77035084 77035309 -18237342 + L1Md_F3 LINE L1 6355 6582 -2 4 1172 891 202 113 0 chr17 77035778 77035981 -18236670 + URR1A DNA MER1_type 1 226 0 4 1172 244 241 0 79 chr17 77036085 77036148 -18236503 - RLTR22_Mur LTR ERVK -498 1350 1293 4 1172 24 53 0 0 chr17 77036326 77036364 -18236287 + AT_rich Low_complexity Low_complexity 1 38 0 4 1172 7123 69 4 0 chr17 77036748 77037658 -18234993 - L1_Mus1 LINE L1 0 6567 5654 5 1172 24 32 0 0 chr17 77037667 77037698 -18234953 + AT_rich Low_complexity Low_complexity 1 31 0 5 1172 9351 191 38 6 chr17 77038722 77039569 -18233082 + L1_Mur1 LINE L1 1173 2050 -3836 5 1172 405 0 0 0 chr17 77039569 77039614 -18233037 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1172 9351 194 41 6 chr17 77039614 77040904 -18231747 + L1_Mur1 LINE L1 2051 3388 -2498 5 1172 2422 219 59 5 chr17 77040896 77041520 -18231131 + Lx2B LINE L1 5754 6411 -589 5 1172 1424 121 27 0 chr17 77041601 77041679 -18230972 - Lx3_Mus LINE L1 -9 7000 6872 5 1172 182 37 0 36 chr17 77041679 77041707 -18230944 + (CACCC)n Simple_repeat Simple_repeat 3 29 0 5 1172 1424 156 31 11 chr17 77041707 77041904 -18230747 - Lx3_Mus LINE L1 -138 6871 6656 5 1172 1732 248 42 61 chr17 77041916 77041961 -18230690 - RMER19B LTR ERVK -27 875 841 5 1172 1049 143 16 0 chr17 77041961 77042143 -18230508 - Lx2 LINE L1 -3 6994 6810 5 1172 1732 212 38 108 chr17 77042143 77042829 -18229822 - RMER19B LTR ERVK -62 840 1 5 1172 1726 237 63 12 chr17 77042829 77043321 -18229330 + Lx2B LINE L1 6466 6982 -18 5 1172 3824 84 30 0 chr17 77043726 77044251 -18228400 - L1_Mus4 LINE L1 -2 6634 6094 5 1172 249 33 0 0 chr17 77045260 77045290 -18227361 + (TA)n Simple_repeat Simple_repeat 2 31 0 6 1172 2112 176 150 31 chr17 77045363 77045968 -18226683 - RMER6C LTR ERVK -9 681 5 6 1172 694 134 0 7 chr17 77046212 77046347 -18226304 + Lx3A LINE L1 6833 6966 -15 6 1172 764 115 8 0 chr17 77046350 77046472 -18226179 + (CATA)n Simple_repeat Simple_repeat 2 124 0 6 1172 226 324 40 13 chr17 77047133 77047208 -18225443 + ID_B1 SINE B4 90 166 -58 6 1172 206 186 33 44 chr17 77047595 77047685 -18224966 + (TTATA)n Simple_repeat Simple_repeat 1 89 0 6 1172 447 19 0 0 chr17 77048501 77048553 -18224098 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 1172 219 200 20 0 chr17 77048742 77048792 -18223859 + (TA)n Simple_repeat Simple_repeat 2 52 0 6 1172 234 116 0 0 chr17 77048817 77048860 -18223791 + (TTAA)n Simple_repeat Simple_repeat 4 46 0 6 1172 454 158 0 58 chr17 77048947 77049068 -18223583 + L1Md_A LINE L1 6469 6582 0 6 1172 189 266 60 45 chr17 77049233 77049300 -18223351 + L2 LINE L2 131 198 -3221 7 1172 21 0 0 0 chr17 77050448 77050469 -18222182 + AT_rich Low_complexity Low_complexity 1 21 0 7 1172 242 264 14 54 chr17 77050769 77050917 -18221734 + L1M4 LINE L1 5136 5277 -869 7 1172 233 241 92 0 chr17 77051014 77051119 -18221532 + L1ME3B LINE L1 5854 5967 -206 7 1172 867 70 0 0 chr17 77051520 77051635 -18221016 + (TC)n Simple_repeat Simple_repeat 1 115 0 7 1172 22 0 0 0 chr17 77051938 77051960 -18220691 + AT_rich Low_complexity Low_complexity 1 22 0 7 1172 542 286 34 0 chr17 77053526 77053673 -18218978 - RSINE1 SINE B4 -13 152 1 7 1172 192 412 33 11 chr17 77053900 77054084 -18218567 + MIR SINE MIR 45 232 -30 7 1172 3531 65 13 21 chr17 77054685 77055158 -18217493 - L1Md_F2 LINE L1 -16 6566 6098 7 1172 336 375 103 0 chr17 77055158 77055294 -18217357 + RSINE1 SINE B4 7 156 -9 7 1172 23 33 0 0 chr17 77055295 77055325 -18217326 + AT_rich Low_complexity Low_complexity 1 30 0 8 1172 465 19 0 0 chr17 77055439 77055493 -18217158 + (TC)n Simple_repeat Simple_repeat 1 54 0 8 1172 620 218 7 43 chr17 77055493 77055632 -18217019 - B1_Mur4 SINE Alu -16 134 1 8 1172 4925 40 0 0 chr17 77055759 77056342 -18216309 + L1Md_F2 LINE L1 5988 6570 -12 8 1172 240 111 0 0 chr17 77056484 77056520 -18216131 + (A)n Simple_repeat Simple_repeat 1 36 0 8 1172 390 21 0 0 chr17 77056766 77056813 -18215838 + (TG)n Simple_repeat Simple_repeat 1 47 0 8 1172 413 261 69 42 chr17 77056816 77056960 -18215691 - RSINE1 SINE B4 -15 150 3 8 1172 572 206 8 0 chr17 77057262 77057393 -18215258 + (TA)n Simple_repeat Simple_repeat 2 133 0 8 1172 195 42 0 0 chr17 77057874 77057898 -18214753 + (T)n Simple_repeat Simple_repeat 1 24 0 8 1172 3968 50 32 0 chr17 77058364 77058860 -18213791 + L1Md_F2 LINE L1 6056 6567 -15 8 1172 1065 235 75 6 chr17 77058944 77059257 -18213394 - MTC LTR MaLR 0 421 1 9 1172 340 337 10 0 chr17 77059529 77059627 -18213024 - LTR88b LTR Gypsy? -736 101 3 9 1172 7224 139 25 11 chr17 77060946 77062174 -18210477 - Lx2A1 LINE L1 -1 7007 5763 9 1172 725 270 101 0 chr17 77063046 77063235 -18209416 + B3 SINE B2 2 209 -7 9 1172 190 160 20 20 chr17 77063322 77063373 -18209278 + CT-rich Low_complexity Low_complexity 2 52 0 9 1172 8930 10 0 2 chr17 77063559 77064867 -18207784 - L1Md_T LINE L1 0 6582 5278 9 1172 10197 23 0 0 chr17 77064866 77066062 -18206589 + L1Md_T LINE L1 4056 5251 -632 9 1172 1181 46 0 7 chr17 77066188 77066341 -18206310 + (TTC)n Simple_repeat Simple_repeat 2 153 0 9 1172 1217 90 0 6 chr17 77066361 77066539 -18206112 + (TTCTCC)n Simple_repeat Simple_repeat 4 180 0 9 1172 200 346 124 55 chr17 77067120 77067395 -18205256 + L2c LINE L2 3054 3347 -40 9 1172 2744 234 11 35 chr17 77067539 77068202 -18204449 - Lx2B LINE L1 -5 6995 6349 9 1172 1507 172 52 4 chr17 77068202 77068471 -18204180 + L1_Mm LINE L1 5426 5707 -176 1 1172 306 0 0 0 chr17 77068946 77068980 -18203671 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 1172 21 36 0 0 chr17 77069148 77069176 -18203475 + AT_rich Low_complexity Low_complexity 1 28 0 1 1172 613 301 0 0 chr17 77069209 77069345 -18203306 - RSINE1 SINE B4 -26 139 4 1 1172 238 372 78 60 chr17 77069963 77070129 -18202522 + MTEa LTR MaLR 1 169 -210 1 146 911 376 124 13 chr17 77070112 77070724 -18201927 + MTE-int LTR MaLR 765 1444 -136 1 1173 187 93 47 0 chr17 77070726 77070769 -18201882 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 1 1173 1106 59 0 0 chr17 77070780 77070915 -18201736 - B1_Mm SINE Alu -8 139 5 1 1173 251 308 77 0 chr17 77070918 77070996 -18201655 + MTE-int LTR MaLR 1431 1514 -66 1 1173 195 129 0 0 chr17 77071182 77071213 -18201438 + (CGTG)n Simple_repeat Simple_repeat 2 32 0 1 1173 3053 66 2 5 chr17 77071230 77071627 -18201024 - MTA_Mm LTR MaLR 0 396 1 1 1173 261 278 19 85 chr17 77072577 77072683 -18199968 + PB1D10 SINE Alu 12 110 -7 1 1173 378 0 0 0 chr17 77072987 77073029 -18199622 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1173 994 97 0 0 chr17 77073031 77073165 -18199486 - B1_Mus1 SINE Alu 0 148 15 1 1173 289 331 13 58 chr17 77073218 77073372 -18199279 - B1F SINE Alu 0 149 3 1 1173 1058 83 0 0 chr17 77073760 77073893 -18198758 + B1_Mus2 SINE Alu 1 133 -14 1 1173 459 20 0 0 chr17 77074271 77074322 -18198329 + L1Md_A LINE L1 5536 5586 -297 1 1173 8607 24 0 0 chr17 77074322 77075317 -18197334 + L1Md_A LINE L1 5587 6581 -1 1 1173 21 57 0 0 chr17 77075966 77076001 -18196650 + AT_rich Low_complexity Low_complexity 1 35 0 1 1173 180 0 0 0 chr17 77076001 77076021 -18196630 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 1 1173 388 366 26 44 chr17 77077054 77077392 -18195259 + Lx9 LINE L1 6809 7187 -457 1 1173 283 285 113 0 chr17 77077430 77077581 -18195070 + Lx9 LINE L1 7439 7606 -38 1 1173 438 157 0 0 chr17 77078133 77078216 -18194435 + CT-rich Low_complexity Low_complexity 2 84 0 1 1173 292 295 39 97 chr17 77078295 77078449 -18194202 + RMER12 LTR ERVK 726 870 -452 1 1173 197 188 50 0 chr17 77078449 77078529 -18194122 + (CATATA)n Simple_repeat Simple_repeat 5 88 0 1 1173 201 208 0 20 chr17 77078544 77078593 -18194058 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 1173 1675 275 44 6 chr17 77078605 77079124 -18193527 + Lx9 LINE L1 7106 7644 0 1 1173 315 279 194 16 chr17 77079482 77079606 -18193045 - MLT1A0 LTR MaLR -1 364 219 1 1173 233 250 12 108 chr17 77079659 77079825 -18192826 - Lx7 LINE L1 -151 7545 7396 1 1173 998 0 20 27 chr17 77079874 77080020 -18192631 + (TTCTC)n Simple_repeat Simple_repeat 5 149 0 1 1173 228 163 0 0 chr17 77080047 77080090 -18192561 + (CATATA)n Simple_repeat Simple_repeat 2 44 0 1 1173 543 237 101 9 chr17 77080321 77080468 -18192183 - Lx9 LINE L1 -8 7636 7480 1 1173 369 0 0 0 chr17 77080468 77080509 -18192142 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1173 543 237 101 9 chr17 77080509 77080578 -18192073 - Lx9 LINE L1 -165 7479 7401 1 1173 369 358 4 17 chr17 77080693 77080932 -18191719 - L1MC LINE L1 -584 5749 5514 1 1173 21 36 0 0 chr17 77082627 77082655 -18189996 + AT_rich Low_complexity Low_complexity 1 28 0 1 1173 660 351 65 21 chr17 77083822 77084256 -18188395 + Tigger6a DNA MER2_type 10 462 -621 1 1173 281 345 41 18 chr17 77084296 77084467 -18188184 + Tigger6a DNA MER2_type 521 695 -388 1 1173 24 0 0 0 chr17 77084553 77084577 -18188074 + AT_rich Low_complexity Low_complexity 1 24 0 1 1173 1472 258 76 38 chr17 77084581 77085004 -18187647 - Lx3C LINE L1 -2 6974 6536 1 1173 233 111 0 43 chr17 77085083 77085130 -18187521 - Tigger6b DNA MER2_type -121 1476 1432 1 1173 228 95 0 87 chr17 77085279 77085348 -18187303 + (TCTCTG)n Simple_repeat Simple_repeat 2 64 0 1 1173 220 179 0 0 chr17 77085352 77085391 -18187260 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1173 246 299 128 28 chr17 77087100 77087241 -18185410 + MLT1A1 LTR MaLR 250 404 -4 1 1173 323 316 108 56 chr17 77087491 77087742 -18184909 + MLT2B4 LTR ERVL 18 281 -275 1 1173 751 191 7 7 chr17 77087942 77088090 -18184561 + URR1B DNA MER1_type 77 224 -1 1 1173 347 348 118 23 chr17 77088468 77088774 -18183877 + Lx8 LINE L1 7139 7473 0 1 1173 28 61 0 0 chr17 77089657 77089706 -18182945 + AT_rich Low_complexity Low_complexity 1 49 0 1 1173 328 127 0 27 chr17 77090438 77090511 -18182140 - L1Md_F2 LINE L1 0 6582 6512 1 1173 281 212 23 23 chr17 77091496 77091583 -18181068 + (TATAA)n Simple_repeat Simple_repeat 5 91 0 1 1173 291 28 0 0 chr17 77091735 77091771 -18180880 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1173 334 367 23 34 chr17 77091831 77092006 -18180645 - B4A SINE B4 -75 217 45 1 1173 228 111 0 0 chr17 77092607 77092643 -18180008 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1173 21 0 0 0 chr17 77093367 77093388 -18179263 + AT_rich Low_complexity Low_complexity 1 21 0 1 1173 2973 77 5 10 chr17 77093927 77094335 -18178316 + L1_Mus2 LINE L1 6160 6565 -1 1 1173 21 36 0 0 chr17 77094354 77094382 -18178269 + AT_rich Low_complexity Low_complexity 1 28 0 1 1173 252 0 0 0 chr17 77095152 77095180 -18177471 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 1173 234 277 50 0 chr17 77095295 77095414 -18177237 - L1MA8 LINE L1 -69 6222 6098 1 1173 582 15 0 0 chr17 77096098 77096165 -18176486 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 1173 228 111 0 0 chr17 77096169 77096205 -18176446 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 1173 351 0 0 0 chr17 77096224 77096263 -18176388 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 1 1173 976 271 34 11 chr17 77097029 77097294 -18175357 - Lx6 LINE L1 -247 7213 6943 1 1173 327 286 0 152 chr17 77097313 77097536 -18175115 + Lx6 LINE L1 7267 7455 -5 1 1173 228 312 68 30 chr17 77098023 77098155 -18174496 - L2a LINE L2 -79 3347 3211 1 1173 898 192 12 35 chr17 77098253 77098426 -18174225 + B2_Mm2 SINE B2 2 170 -25 1 1173 649 152 0 14 chr17 77098470 77098610 -18174041 + (TA)n Simple_repeat Simple_repeat 2 139 0 1 1173 7280 113 17 0 chr17 77098768 77100182 -18172469 + L1_Mus3 LINE L1 5201 6637 -1 1 1173 21 0 0 0 chr17 77100537 77100558 -18172093 + AT_rich Low_complexity Low_complexity 1 21 0 1 1173 1198 235 153 7 chr17 77102896 77103307 -18169344 - L1_Mur3 LINE L1 -190 5690 5220 1 1173 824 269 56 75 chr17 77103323 77103696 -18168955 + Lx7 LINE L1 7127 7492 -204 1 1173 3634 181 86 13 chr17 77103681 77104426 -18168225 - Lx2 LINE L1 -1 6996 6198 1 1173 403 234 120 0 chr17 77104454 77104612 -18168039 + Lx7 LINE L1 7520 7696 0 1 1173 1153 133 0 37 chr17 77104623 77104810 -18167841 + B2_Mm2 SINE B2 2 181 -14 1 1173 522 31 0 0 chr17 77104848 77104912 -18167739 + (TA)n Simple_repeat Simple_repeat 1 64 0 1 1173 307 360 230 6 chr17 77105021 77105186 -18167465 + ID_B1 SINE B4 5 206 -18 1 1173 502 291 52 20 chr17 77105858 77106163 -18166488 + L1M5 LINE L1 3297 3611 -2535 1 1173 2707 120 26 2 chr17 77106229 77106646 -18166005 - Lx3_Mus LINE L1 -16 6993 6567 1 1173 3225 26 39 0 chr17 77106648 77107029 -18165622 + MTA_Mm LTR MaLR 1 396 0 1 1173 9518 21 2 0 chr17 77107029 77108125 -18164526 + MTA_Mm-int LTR MaLR 1 1098 0 1 1173 3228 26 39 0 chr17 77108125 77108506 -18164145 + MTA_Mm LTR MaLR 1 396 0 1 1173 918 148 7 0 chr17 77108660 77108802 -18163849 + B1_Mus1 SINE Alu 1 143 -5 1 1173 382 247 10 10 chr17 77111793 77111891 -18160760 + Lx9 LINE L1 7052 7149 -495 1 1173 1986 182 76 44 chr17 77111895 77112400 -18160251 - Lx5 LINE L1 -817 6233 5676 1 1173 3581 219 56 12 chr17 77112407 77113160 -18159491 + Lx5 LINE L1 6257 7042 -8 1 1173 265 242 91 0 chr17 77113177 77113243 -18159408 + Lx9 LINE L1 7134 7205 -439 1 1173 1126 265 114 0 chr17 77113422 77113746 -18158905 - ORR1D1 LTR MaLR -3 371 11 1 1173 22 88 0 0 chr17 77113869 77113926 -18158725 + AT_rich Low_complexity Low_complexity 1 57 0 1 1173 372 43 0 0 chr17 77114590 77114636 -18158015 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1173 1526 341 51 71 chr17 77114691 77114838 -18157813 + Lx8 LINE L1 6224 6353 -1120 1 1173 1032 84 6 6 chr17 77114838 77114994 -18157657 - L1_Mus2 LINE L1 -14 6552 6397 1 1173 1526 341 51 71 chr17 77114994 77115107 -18157544 + Lx8 LINE L1 6354 6459 -1014 1 1173 468 0 0 0 chr17 77115107 77115159 -18157492 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1173 1526 341 51 71 chr17 77115159 77115924 -18156727 + Lx8 LINE L1 6460 7229 -244 1 1173 378 0 0 0 chr17 77116608 77116650 -18156001 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1173 379 268 0 11 chr17 77116868 77116955 -18155696 - MLT1C LTR MaLR 0 467 382 1 1173 791 319 12 39 chr17 77117474 77117732 -18154919 + MTE2a LTR MaLR 123 373 -6 1 1173 643 290 92 43 chr17 77117752 77118476 -18154175 - L1MC LINE L1 -1095 5051 4292 1 1173 319 127 16 16 chr17 77118610 77118674 -18153977 + CT-rich Low_complexity Low_complexity 3 66 0 1 1173 8415 113 15 4 chr17 77118819 77120874 -18151777 - L1_Mus3 LINE L1 0 6638 4562 1 1173 1702 128 4 0 chr17 77120873 77121139 -18151512 + L1_Mus3 LINE L1 4292 4558 -1325 1 1173 426 292 56 9 chr17 77121147 77121361 -18151290 - L1MC LINE L1 -2116 4030 3807 1 1173 30 0 0 0 chr17 77122240 77122270 -18150381 + AT_rich Low_complexity Low_complexity 1 30 0 1 1173 507 306 134 42 chr17 77123027 77123396 -18149255 - BGLII_B LTR ERVK -27 414 1 1 1173 762 11 0 0 chr17 77124068 77124155 -18148496 + (GAA)n Simple_repeat Simple_repeat 1 87 0 1 1173 1362 62 0 0 chr17 77124155 77124332 -18148319 + (GGA)n Simple_repeat Simple_repeat 2 178 0 1 1173 2792 115 14 2 chr17 77125995 77126519 -18146132 + L1_Mus3 LINE L1 6213 6638 0 1 1173 26 0 0 0 chr17 77127228 77127254 -18145397 + AT_rich Low_complexity Low_complexity 1 26 0 1 1173 3609 42 72 4 chr17 77127726 77128184 -18144467 - L1Md_F3 LINE L1 0 6584 6096 1 1173 4132 173 52 14 chr17 77128329 77129149 -18143502 + L1_Mur2 LINE L1 4431 5282 -595 1 1173 819 101 0 0 chr17 77129149 77129268 -18143383 + (GAAA)n Simple_repeat Simple_repeat 2 120 0 1 1173 4132 173 52 14 chr17 77129268 77129313 -18143338 + L1_Mur2 LINE L1 5283 5329 -548 1 1173 4987 49 0 2 chr17 77129315 77129925 -18142726 + L1Md_F2 LINE L1 5962 6570 -12 1 1173 430 242 0 0 chr17 77129935 77130026 -18142625 + L1_Mur2 LINE L1 5455 5545 -332 1 1173 300 353 90 23 chr17 77130080 77130257 -18142394 + L1MC3 LINE L1 4640 4828 -1318 1 1173 6284 109 20 4 chr17 77130302 77132009 -18140642 - L1VL2 LINE L1 -1795 1820 88 1 1173 375 300 14 21 chr17 77132176 77132319 -18140332 + GA-rich Low_complexity Low_complexity 3 144 0 1 1173 506 278 124 42 chr17 77132322 77132773 -18139878 + L1MC3 LINE L1 5331 5818 -1967 1 1173 327 49 0 0 chr17 77132776 77132817 -18139834 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1173 414 372 83 15 chr17 77132953 77133351 -18139300 + L1MC3 LINE L1 6031 6455 -1330 1 1173 444 359 101 12 chr17 77133388 77133803 -18138848 + L1MC3 LINE L1 6505 6956 -829 1 1173 243 250 173 0 chr17 77134131 77134235 -18138416 + L1MC3 LINE L1 7233 7354 -431 1 1173 353 277 95 128 chr17 77134240 77134513 -18138138 + L1MC3 LINE L1 7459 7722 -63 1 1173 1052 84 0 6 chr17 77135361 77135528 -18137123 + (GA)n Simple_repeat Simple_repeat 2 167 0 2 1173 24 32 0 0 chr17 77136042 77136073 -18136578 + AT_rich Low_complexity Low_complexity 1 31 0 2 1173 286 328 28 39 chr17 77136117 77136295 -18136356 + Lx7 LINE L1 5538 5747 -1949 2 1173 215 203 17 0 chr17 77136383 77136442 -18136209 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 1173 510 114 0 0 chr17 77136998 77137077 -18135574 + (TG)n Simple_repeat Simple_repeat 1 79 0 2 1173 302 310 288 7 chr17 77137080 77137226 -18135425 - B3 SINE B2 -17 199 13 2 1173 249 274 0 0 chr17 77137532 77137594 -18135057 + (CATATA)n Simple_repeat Simple_repeat 4 65 0 2 1173 256 239 0 0 chr17 77137581 77137648 -18135003 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 1173 4846 40 13 7 chr17 77137856 77138118 -18134533 + L1Md_F3 LINE L1 4977 5234 -649 2 1173 591 53 0 0 chr17 77138118 77138193 -18134458 + (TA)n Simple_repeat Simple_repeat 1 75 0 2 1173 4846 40 13 7 chr17 77138193 77138535 -18134116 + L1Md_F3 LINE L1 5235 5583 -300 2 1173 8223 39 3 0 chr17 77138536 77139530 -18133121 + L1Md_F3 LINE L1 5587 6583 -1 2 1173 2839 171 87 31 chr17 77140414 77141022 -18131629 + RLTR26 LTR ERVK 1 642 0 2 1173 439 318 83 32 chr17 77141077 77141295 -18131356 - RMER15 LTR ERVL 0 575 347 2 1173 476 309 25 78 chr17 77141487 77141691 -18130960 - B3A SINE B2 0 198 6 2 1173 339 298 38 108 chr17 77141959 77142117 -18130534 + B4 SINE B4 77 223 -69 2 1173 733 217 0 7 chr17 77141979 77142118 -18130533 + B1_Mus2 SINE Alu 9 146 -1 2 1173 275 0 0 28 chr17 77142118 77142154 -18130497 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1173 219 69 0 0 chr17 77142161 77142190 -18130461 + (GGA)n Simple_repeat Simple_repeat 2 30 0 2 1173 537 68 0 0 chr17 77143934 77144008 -18128643 + (TATG)n Simple_repeat Simple_repeat 2 75 0 2 1173 230 369 26 35 chr17 77144009 77144124 -18128527 - Lx8 LINE L1 -146 7327 7214 2 1173 923 326 63 24 chr17 77144123 77144582 -18128069 + Lx8 LINE L1 6460 6936 -537 2 1173 367 19 19 19 chr17 77144663 77144716 -18127935 + (TTA)n Simple_repeat Simple_repeat 2 54 0 2 1173 251 247 111 0 chr17 77144729 77144810 -18127841 - MLT1B LTR MaLR -201 189 100 2 1173 696 304 51 15 chr17 77145055 77145627 -18127024 - L1MA4 LINE L1 -363 5937 5336 2 1173 267 333 8 49 chr17 77145636 77145759 -18126892 - MLT1B LTR MaLR -272 118 1 2 1173 258 32 0 0 chr17 77146838 77146869 -18125782 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 2 1173 531 340 9 14 chr17 77146872 77147084 -18125567 - ID_B1 SINE B4 -12 212 2 2 1173 411 382 37 19 chr17 77147137 77147353 -18125298 + ID_B1 SINE B4 3 222 -2 2 1173 234 200 35 35 chr17 77147358 77147415 -18125236 + RMER15 LTR ERVL 403 459 -116 2 1173 572 296 64 19 chr17 77147463 77147728 -18124923 + Lx9 LINE L1 7207 7483 -161 2 1173 408 125 0 0 chr17 77147913 77147977 -18124674 + (TA)n Simple_repeat Simple_repeat 2 65 0 2 1173 532 27 13 13 chr17 77149597 77149672 -18122979 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 2 1173 489 141 0 0 chr17 77149690 77149789 -18122862 + (TG)n Simple_repeat Simple_repeat 2 100 0 2 1173 204 125 0 0 chr17 77150152 77150184 -18122467 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 2 1173 8363 147 13 6 chr17 77150186 77151235 -18121416 - Lx3A LINE L1 -10 6971 5914 2 1173 243 61 0 0 chr17 77151235 77151268 -18121383 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 2 1173 11385 119 18 9 chr17 77151268 77153105 -18119546 - Lx3A LINE L1 -1068 5913 4064 2 1173 218 369 0 0 chr17 77154189 77154292 -18118359 + GA-rich Low_complexity Low_complexity 2 104 0 2 1173 337 379 0 0 chr17 77154763 77154895 -18117756 + L4 LINE RTE 1265 1396 -633 2 1173 269 161 18 0 chr17 77155889 77155945 -18116706 - Lx2 LINE L1 -1 6996 6940 2 1173 2277 122 114 32 chr17 77155945 77156384 -18116267 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1173 325 127 0 0 chr17 77156386 77156441 -18116210 + IAPEz-int LTR ERVK 3 57 -1930 2 1173 470 131 17 139 chr17 77156464 77156579 -18116072 + IAPEz-int LTR ERVK 23 123 -6358 2 1173 226 267 0 0 chr17 77156579 77156624 -18116027 + RLTR27 LTR ERVK 231 275 -34 2 1173 3395 88 39 44 chr17 77156627 77157346 -18115305 + IAPEz-int LTR ERVK 94 662 -5819 2 1173 2040 53 57 0 chr17 77157346 77157609 -18115042 + IAPEz-int LTR ERVK 1359 1636 -4845 2 1173 6142 39 4 7 chr17 77157608 77158356 -18114295 + IAPEz-int LTR ERVK 5736 6481 0 2 1173 2301 118 114 32 chr17 77158356 77158795 -18113856 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1173 1200 138 59 0 chr17 77158795 77158998 -18113653 - Lx2 LINE L1 -52 6945 6731 2 1173 632 156 139 0 chr17 77159021 77159143 -18113508 + Lx2B LINE L1 6576 6714 -286 2 1173 398 70 98 20 chr17 77159272 77159374 -18113277 + GA-rich Low_complexity Low_complexity 1 110 0 2 1173 238 350 0 0 chr17 77159378 77159438 -18113213 + G-rich Low_complexity Low_complexity 1 60 0 2 1173 395 67 26 39 chr17 77159438 77159516 -18113135 + (GAGAA)n Simple_repeat Simple_repeat 3 79 0 2 1173 419 271 35 14 chr17 77161492 77161634 -18111017 + L1MA4 LINE L1 5784 5928 -372 2 1173 29 0 0 0 chr17 77163242 77163271 -18109380 + AT_rich Low_complexity Low_complexity 1 29 0 2 1173 2108 59 0 4 chr17 77163271 77163543 -18109108 - L1Md_F3 LINE L1 -16 6568 6298 2 1173 315 0 0 0 chr17 77164473 77164508 -18108143 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1173 5158 110 113 5 chr17 77164524 77165477 -18107174 - L1_Mus3 LINE L1 -186 6452 5420 2 1173 589 191 36 14 chr17 77165511 77165649 -18107002 + URR1B DNA MER1_type 78 218 -7 2 1173 262 83 0 0 chr17 77166697 77166733 -18105918 + B1_Mus2 SINE Alu 1 36 -111 2 1173 6444 121 9 11 chr17 77166733 77167751 -18104900 + Lx3_Mus LINE L1 5994 7009 0 2 1173 294 286 0 0 chr17 77168367 77168437 -18104214 + ID_B1 SINE B4 83 152 -72 2 1173 260 213 16 47 chr17 77168380 77168444 -18104207 + PB1 SINE Alu 15 76 -51 2 1173 227 328 79 14 chr17 77169672 77169811 -18102840 + Lx9 LINE L1 7117 7264 -380 2 1173 26 30 0 0 chr17 77170016 77170049 -18102602 + AT_rich Low_complexity Low_complexity 1 33 0 2 1173 210 296 0 0 chr17 77170059 77170113 -18102538 + CT-rich Low_complexity Low_complexity 5 58 0 2 1173 1224 57 0 0 chr17 77170738 77170895 -18101756 + (TC)n Simple_repeat Simple_repeat 2 158 0 2 1173 243 0 0 0 chr17 77170895 77170921 -18101730 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1173 246 273 0 83 chr17 77170921 77171005 -18101646 + MTE2b LTR MaLR 9 85 -294 2 1173 794 332 54 25 chr17 77171015 77171330 -18101321 + MTE2b LTR MaLR 56 379 0 2 1173 315 306 69 73 chr17 77171610 77171871 -18100780 + AmnSINE1 SINE SINE 136 395 -180 2 1173 294 29 0 0 chr17 77172740 77172775 -18099876 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1173 1384 303 57 20 chr17 77172818 77173323 -18099328 - Lx8 LINE L1 -189 7284 6761 2 1173 722 180 230 0 chr17 77173329 77173507 -18099144 + URR1B DNA MER1_type 7 225 0 2 1173 27 29 0 0 chr17 77173571 77173605 -18099046 + AT_rich Low_complexity Low_complexity 1 34 0 2 1173 598 350 125 3 chr17 77173623 77173958 -18098693 - Lx8 LINE L1 -777 6696 6321 2 1173 228 163 0 0 chr17 77176046 77176089 -18096562 + GA-rich Low_complexity Low_complexity 3 45 0 2 1173 249 280 53 13 chr17 77176252 77176328 -18096323 + ID_B1 SINE B4 135 213 -11 2 1173 795 126 0 0 chr17 77176436 77176563 -18096088 + (TATATG)n Simple_repeat Simple_repeat 3 129 0 2 1173 42 98 0 0 chr17 77176622 77176755 -18095896 + AT_rich Low_complexity Low_complexity 1 133 0 2 1173 279 0 0 0 chr17 77176843 77176874 -18095777 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1173 3975 244 39 13 chr17 77176915 77178345 -18094306 - Lx6 LINE L1 -737 6723 5251 2 1173 486 0 0 0 chr17 77178396 77178450 -18094201 + (TC)n Simple_repeat Simple_repeat 1 54 0 2 1173 207 0 0 0 chr17 77178450 77178472 -18094179 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 1173 545 304 57 46 chr17 77178500 77178872 -18093779 + L1_Mur3 LINE L1 3847 4222 -1658 2 1173 2969 186 27 2 chr17 77178876 77179430 -18093221 - Lx2B LINE L1 -4 6996 6429 2 1173 419 151 0 0 chr17 77179432 77179505 -18093146 + Lx2A1 LINE L1 6079 6151 -857 2 1173 411 164 0 0 chr17 77179506 77179579 -18093072 + B1_Mm SINE Alu 75 147 0 2 1173 216 60 39 39 chr17 77179585 77179637 -18093014 + (CAAAAA)n Simple_repeat Simple_repeat 4 55 0 2 1173 1481 167 0 77 chr17 77179637 77179882 -18092769 + Lx2A1 LINE L1 6128 6355 -653 2 1173 2586 128 107 11 chr17 77179882 77180332 -18092319 + Lx LINE L1 6161 6653 -1 2 1173 1481 146 0 171 chr17 77180332 77180440 -18092211 + Lx2A1 LINE L1 6356 6423 -577 2 1173 397 332 12 31 chr17 77180545 77180796 -18091855 + L1M2 LINE L1 4405 4653 -1490 2 1173 348 24 0 0 chr17 77180796 77180837 -18091814 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1173 397 332 12 31 chr17 77180837 77180908 -18091743 + L1M2 LINE L1 4654 4721 -1422 2 1173 633 73 0 0 chr17 77182089 77182185 -18090466 + (TCTCTG)n Simple_repeat Simple_repeat 1 96 0 2 1173 23 54 0 0 chr17 77182907 77182944 -18089707 + AT_rich Low_complexity Low_complexity 1 37 0 2 1173 1054 177 101 0 chr17 77183299 77183536 -18089115 + Lx2A1 LINE L1 6748 7008 0 2 1173 5470 122 62 5 chr17 77183658 77184971 -18087680 - L1_Mur1 LINE L1 -3823 2063 676 2 1173 4214 114 26 14 chr17 77185089 77185159 -18087492 + Lx3_Mus LINE L1 5214 5289 -597 2 1173 315 49 0 0 chr17 77185159 77185200 -18087451 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1173 8939 112 35 7 chr17 77185200 77186869 -18085782 + Lx3_Mus LINE L1 5290 7001 -8 2 1173 761 228 119 0 chr17 77187441 77187643 -18085008 - URR1A DNA MER1_type 0 226 1 2 1173 671 89 16 31 chr17 77188221 77188349 -18084302 + (TTCC)n Simple_repeat Simple_repeat 3 128 0 2 1173 29 28 0 0 chr17 77188559 77188595 -18084056 + AT_rich Low_complexity Low_complexity 1 36 0 2 1173 324 48 0 0 chr17 77188676 77188718 -18083933 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1173 313 260 120 0 chr17 77188906 77189006 -18083645 + RMER20B LTR ERVK 125 236 -391 2 1173 7881 56 2 1 chr17 77189007 77190209 -18082442 - L1Md_F2 LINE L1 -12 6570 5368 2 1173 5761 71 0 0 chr17 77190208 77190958 -18081693 + L1Md_F2 LINE L1 4598 5347 -536 2 1173 369 252 50 58 chr17 77190958 77191097 -18081554 + RMER20B LTR ERVK 220 357 -270 2 1173 351 191 6 32 chr17 77191278 77191435 -18081216 + (TA)n Simple_repeat Simple_repeat 1 153 0 2 1173 1164 255 26 0 chr17 77191558 77191860 -18080791 - Lx7 LINE L1 -507 7189 6880 2 1173 838 121 12 0 chr17 77192718 77192884 -18079767 + (TC)n Simple_repeat Simple_repeat 1 168 0 2 1173 6100 177 28 59 chr17 77193086 77194252 -18078399 + RLTR21 LTR ERVK 1 1127 -445 2 1173 195 129 0 0 chr17 77194252 77194283 -18078368 + (TATG)n Simple_repeat Simple_repeat 4 34 0 2 1173 6100 181 30 60 chr17 77194283 77194451 -18078200 + RLTR21 LTR ERVK 1128 1433 -139 2 1173 422 36 18 0 chr17 77194451 77194507 -18078144 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1173 773 306 119 68 chr17 77194507 77194654 -18077997 + RLTR21 LTR ERVK 1434 1567 -5 2 1173 679 22 11 11 chr17 77194949 77195039 -18077612 + (GA)n Simple_repeat Simple_repeat 1 90 0 2 1173 1356 126 37 0 chr17 77195214 77195429 -18077222 - Lx2 LINE L1 0 6997 6775 2 1173 6531 140 24 6 chr17 77195429 77196776 -18075875 - Lx2 LINE L1 -354 6643 5266 2 1173 6081 88 7 34 chr17 77196778 77196839 -18075812 - L1VL4 LINE L1 -1742 1817 1763 2 1173 5690 143 25 6 chr17 77196839 77197779 -18074872 + RMER17B LTR ERVK 1 958 0 3 1173 6081 96 12 24 chr17 77197779 77199153 -18073498 - L1VL4 LINE L1 -1797 1762 397 2 1173 422 138 35 0 chr17 77199188 77199275 -18073376 - Lx3_Mus LINE L1 0 7009 6920 3 1173 2782 78 2 22 chr17 77199275 77199682 -18072969 - L1_Mur1 LINE L1 -539 5347 4949 3 1173 235 254 14 40 chr17 77201258 77201332 -18071319 + L2a LINE L2 3352 3423 -3 3 1174 378 0 0 0 chr17 77202170 77202212 -18070439 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1174 1554 158 114 10 chr17 77202863 77203170 -18069481 - ORR1B2 LTR MaLR 0 367 29 3 1174 1721 40 0 0 chr17 77203802 77204003 -18068648 + L1Md_F2 LINE L1 6209 6409 -173 3 1174 36 23 0 0 chr17 77204300 77204343 -18068308 + AT_rich Low_complexity Low_complexity 1 43 0 3 1174 32 75 0 0 chr17 77204370 77204437 -18068214 + AT_rich Low_complexity Low_complexity 1 67 0 3 1174 462 311 8 0 chr17 77205031 77205163 -18067488 + B1_Mur3 SINE Alu 6 138 -11 3 1174 464 214 8 0 chr17 77205184 77205301 -18067350 + (TA)n Simple_repeat Simple_repeat 1 118 0 3 1174 259 343 80 32 chr17 77205341 77205528 -18067123 + Charlie16a DNA MER1_type 140 335 -7 3 1174 243 0 0 0 chr17 77206010 77206037 -18066614 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1174 758 280 135 20 chr17 77206125 77206667 -18065984 + L1MA5 LINE L1 5523 6129 -162 3 1174 1099 267 60 88 chr17 77206667 77207098 -18065553 - MTD LTR MaLR 0 419 1 3 1174 301 269 161 55 chr17 77207098 77207225 -18065426 + L1MA5 LINE L1 6130 6281 -10 3 1174 326 303 72 34 chr17 77207359 77207595 -18065056 - MER33 DNA MER1_type -54 270 26 3 1174 1111 278 171 23 chr17 77208253 77208731 -18063920 - RMER15 LTR ERVL 0 575 27 3 1174 252 279 0 29 chr17 77208744 77208814 -18063837 - RMER15 LTR ERVL -507 68 1 3 1174 1013 124 0 0 chr17 77209122 77209267 -18063384 + B1_Mus1 SINE Alu 2 146 -2 3 1174 293 314 12 0 chr17 77210218 77210304 -18062347 - MER89 LTR ERV1 -59 500 414 3 1174 2000 61 0 8 chr17 77210378 77210643 -18062008 - L1Md_F2 LINE L1 -15 6567 6305 3 1174 39 0 0 0 chr17 77211846 77211885 -18060766 + AT_rich Low_complexity Low_complexity 1 39 0 3 1174 1342 145 105 174 chr17 77212172 77212478 -18060173 - ORR1B1 LTR MaLR -2 392 42 3 1174 3044 91 14 5 chr17 77212478 77212920 -18059731 - Lx3_Mus LINE L1 -4 7005 6560 3 1174 1257 145 105 174 chr17 77212920 77212964 -18059687 - ORR1B1 LTR MaLR -288 41 1 3 1174 194 0 39 0 chr17 77213060 77213086 -18059565 + (CAGA)n Simple_repeat Simple_repeat 4 30 0 3 1174 583 304 68 47 chr17 77213098 77213436 -18059215 + RLTR15 LTR ERVK 1 345 -14 3 1174 345 47 0 0 chr17 77214495 77214538 -18058113 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 1174 26 0 0 0 chr17 77214790 77214816 -18057835 + AT_rich Low_complexity Low_complexity 1 26 0 3 1174 581 65 0 0 chr17 77214844 77214936 -18057715 - L1Md_F3 LINE L1 -3 6581 6490 3 1174 1927 169 0 3 chr17 77214938 77215265 -18057386 - Lx3A LINE L1 -4 6977 6652 3 1174 23 0 0 0 chr17 77215785 77215808 -18056843 + AT_rich Low_complexity Low_complexity 1 23 0 3 1174 2787 45 16 122 chr17 77215960 77216394 -18056257 + RLTR10 LTR ERVK 1 388 -2 3 1174 302 309 133 20 chr17 77216489 77216684 -18055967 + ID_B1 SINE B4 3 219 -5 3 1174 405 0 0 0 chr17 77216795 77216840 -18055811 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 3 1174 1057 111 0 0 chr17 77216840 77216984 -18055667 - B1_Mus1 SINE Alu -4 144 1 3 1174 209 119 24 0 chr17 77218341 77218383 -18054268 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 1174 4821 72 9 5 chr17 77218804 77219441 -18053210 - L1_Mus1 LINE L1 -1 6566 5927 3 1174 368 20 0 0 chr17 77219442 77219491 -18053160 + L1_Mus1 LINE L1 5906 5954 -613 3 1174 239 333 49 12 chr17 77219496 77219578 -18053073 + MER82 DNA MER2_type 9 93 -560 3 1174 23 0 0 0 chr17 77219692 77219715 -18052936 + AT_rich Low_complexity Low_complexity 1 23 0 3 1174 216 262 12 12 chr17 77220324 77220405 -18052246 + CT-rich Low_complexity Low_complexity 2 82 0 3 1174 2560 41 3 0 chr17 77221546 77221861 -18050790 + L1Md_F3 LINE L1 6255 6570 -14 3 1174 381 322 47 14 chr17 77221948 77222096 -18050555 + B4A SINE B4 126 278 -14 3 1174 450 0 0 0 chr17 77222569 77222619 -18050032 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 1174 342 67 0 0 chr17 77222619 77222664 -18049987 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1174 252 319 14 14 chr17 77222701 77222771 -18049880 + ID4 SINE ID 8 77 -6 3 1174 24 0 0 0 chr17 77223062 77223086 -18049565 + AT_rich Low_complexity Low_complexity 1 24 0 3 1174 228 278 0 0 chr17 77223615 77223669 -18048982 + GA-rich Low_complexity Low_complexity 3 56 0 3 1174 34 65 0 0 chr17 77224012 77224074 -18048577 + AT_rich Low_complexity Low_complexity 1 62 0 3 1174 575 294 0 22 chr17 77224606 77224745 -18047906 + RSINE1 SINE B4 5 140 -25 3 1174 1235 268 114 15 chr17 77224916 77225379 -18047272 - RLTR11A2 LTR ERVK 0 527 19 3 1174 532 219 7 42 chr17 77225444 77225587 -18047064 - MYSERV-int LTR ERVK -66 6484 6347 3 1174 1255 229 26 13 chr17 77225672 77225978 -18046673 - MYSERV-int LTR ERVK -201 6349 6040 3 1174 697 256 4 91 chr17 77225973 77226205 -18046446 - MYSERV6-int LTR ERVK -626 8333 8122 3 1174 289 174 45 23 chr17 77226214 77226302 -18046349 - MYSERV-int LTR ERVK -1059 5491 5402 3 1174 402 211 30 23 chr17 77226313 77226444 -18046207 - MYSERV6-int LTR ERVK -1060 7899 7768 3 1174 240 312 0 97 chr17 77226470 77226573 -18046078 - RMER4B LTR ERVK -49 536 444 3 1174 238 221 16 8 chr17 77226655 77226718 -18045933 - RLTR11A2 LTR ERVK -461 67 7 3 1174 228 111 0 0 chr17 77227840 77227876 -18044775 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 3 1174 368 270 124 0 chr17 77227916 77228005 -18044646 - B1_Mur1 SINE Alu -20 129 30 3 1174 293 68 23 0 chr17 77229390 77229434 -18043217 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 1174 319 307 66 9 chr17 77229587 77229814 -18042837 - L1M3 LINE L1 -1714 4426 4187 3 1174 740 273 24 26 chr17 77229875 77230214 -18042437 + L1_Mur3 LINE L1 5173 5627 -673 3 1174 472 202 49 32 chr17 77230571 77230694 -18041957 + Lx2 LINE L1 6872 6996 -1 3 1174 197 83 0 27 chr17 77230946 77230983 -18041668 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 3 1174 608 142 0 93 chr17 77231493 77231633 -18041018 + Lx LINE L1 6525 6651 -3 3 1174 1072 46 0 0 chr17 77231989 77232119 -18040532 - L1_Mus1 LINE L1 -293 6273 6144 3 1174 1925 56 109 4 chr17 77232119 77232386 -18040265 + L1_Mus1 LINE L1 6273 6567 0 3 1174 216 111 0 0 chr17 77232389 77232425 -18040226 + (A)n Simple_repeat Simple_repeat 1 36 0 3 1174 6069 209 70 22 chr17 77232734 77234638 -18038013 + L1_Mur2 LINE L1 901 2958 -2919 3 1174 251 191 32 0 chr17 77234653 77234716 -18037935 + (TTA)n Simple_repeat Simple_repeat 2 66 0 3 1174 8104 47 2 2 chr17 77234729 77236104 -18036547 - L1Md_F2 LINE L1 -15 6567 5192 3 1174 373 237 175 0 chr17 77236105 77236219 -18036432 - B1_Mur2 SINE Alu -8 141 8 3 1174 663 192 0 0 chr17 77236237 77236404 -18036247 + (TCTA)n Simple_repeat Simple_repeat 3 169 0 3 1174 4340 247 58 9 chr17 77236407 77237456 -18035195 + Lx5 LINE L1 5948 7047 -3 3 1174 307 227 0 0 chr17 77238457 77238523 -18034128 - Lx7 LINE L1 -4 7692 7627 3 1174 33 0 0 0 chr17 77238526 77238559 -18034092 + AT_rich Low_complexity Low_complexity 1 33 0 3 1174 503 225 129 85 chr17 77238568 77238840 -18033811 - Lx7 LINE L1 -181 7515 7232 3 1174 756 291 65 18 chr17 77239104 77239381 -18033270 - MTD LTR MaLR -4 415 126 3 1174 1114 285 0 7 chr17 77239413 77239685 -18032966 + Lx6 LINE L1 7165 7434 -26 3 1174 270 0 0 0 chr17 77239760 77239790 -18032861 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 3 1174 918 98 13 7 chr17 77240283 77240437 -18032214 + (GAAA)n Simple_repeat Simple_repeat 2 156 0 3 1174 548 120 0 10 chr17 77240465 77240566 -18032085 + (CATA)n Simple_repeat Simple_repeat 3 102 0 3 1174 2862 84 30 0 chr17 77240669 77241073 -18031578 - L1_Mm LINE L1 -1805 4078 3663 3 1174 1875 51 0 13 chr17 77241073 77241311 -18031340 + L1Md_F2 LINE L1 6338 6572 -10 3 1174 21 36 0 0 chr17 77241708 77241736 -18030915 + AT_rich Low_complexity Low_complexity 1 28 0 3 1174 1563 45 5 0 chr17 77241910 77242110 -18030541 + L1Md_F2 LINE L1 6380 6580 -2 3 1174 249 340 246 82 chr17 77243240 77243796 -18028855 - L2 LINE L2 -437 2982 2336 3 1174 1023 62 7 46 chr17 77243858 77244011 -18028640 + B1_Mus1 SINE Alu 2 148 0 3 1174 1799 334 53 56 chr17 77244968 77245990 -18026661 - Lx8 LINE L1 -29 7444 6426 3 1174 858 349 62 57 chr17 77246003 77246760 -18025891 + Lx8 LINE L1 5625 6385 -1088 3 1174 33 56 0 0 chr17 77247456 77247510 -18025141 + AT_rich Low_complexity Low_complexity 1 54 0 3 1174 634 242 8 0 chr17 77248754 77248886 -18023765 + B1_Mur4 SINE Alu 6 138 -12 3 1174 225 65 0 0 chr17 77248890 77248921 -18023730 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1174 186 71 0 0 chr17 77249612 77249640 -18023011 + (TTG)n Simple_repeat Simple_repeat 2 29 0 3 1174 1270 275 29 59 chr17 77250089 77250451 -18022200 - RMER10A LTR ERVL 0 442 100 3 1174 970 184 153 0 chr17 77250451 77250647 -18022004 - URR1A DNA MER1_type 0 226 1 3 1174 1270 275 29 59 chr17 77250647 77250740 -18021911 - RMER10A LTR ERVL -343 99 2 3 1174 1963 203 45 43 chr17 77250795 77251305 -18021346 + RLTR20B3 LTR ERVK 1 511 -66 3 1174 182 305 47 35 chr17 77251514 77251599 -18021052 + L3 LINE CR1 3934 4019 -470 3 1174 1308 251 80 80 chr17 77251662 77251689 -18020962 - RMER19C LTR ERVK 0 611 585 3 1174 3101 54 0 0 chr17 77251689 77252075 -18020576 - L1_Mus1 LINE L1 0 6567 6182 3 1174 1308 251 80 80 chr17 77252075 77252533 -18020118 - RMER19C LTR ERVK -27 584 127 3 1174 568 304 27 16 chr17 77252820 77253004 -18019647 + MTEa LTR MaLR 194 379 0 3 1174 2982 146 47 21 chr17 77253068 77253580 -18019071 + Lx LINE L1 5932 6456 -198 3 1174 390 129 0 0 chr17 77255063 77255125 -18017526 + (TA)n Simple_repeat Simple_repeat 1 62 0 3 1174 826 201 157 23 chr17 77255125 77255407 -18017244 - RMER13B LTR ERVK -204 704 328 3 1174 835 236 8 49 chr17 77255407 77255660 -18016991 + Lx7 LINE L1 7268 7680 -16 3 1174 28 79 0 0 chr17 77255687 77255750 -18016901 + AT_rich Low_complexity Low_complexity 1 63 0 3 1174 324 0 0 0 chr17 77255850 77255886 -18016765 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1174 458 54 26 39 chr17 77256267 77256344 -18016307 + L1_Mus3 LINE L1 6555 6630 -8 4 1174 1246 90 17 0 chr17 77256546 77256723 -18015928 - B2_Mm2 SINE B2 -14 181 2 4 1174 265 281 71 30 chr17 77256777 77256876 -18015775 - PB1D7 SINE Alu -1 119 17 4 1174 427 202 66 58 chr17 77256907 77257044 -18015607 + MTEa LTR MaLR 242 379 0 4 1174 1111 60 7 0 chr17 77257372 77257523 -18015128 + B2_Mm2 SINE B2 1 152 -43 4 1174 7868 94 16 3 chr17 77257544 77259415 -18013236 - L1Md_F2 LINE L1 0 6582 4654 4 1174 3571 67 0 193 chr17 77259139 77259839 -18012812 + L1_Mm LINE L1 4402 4966 -917 4 1174 21 36 0 0 chr17 77259894 77259922 -18012729 + AT_rich Low_complexity Low_complexity 1 28 0 4 1174 321 89 0 0 chr17 77261122 77261167 -18011484 + (A)n Simple_repeat Simple_repeat 1 45 0 4 1174 5557 68 0 0 chr17 77262006 77262724 -18009927 - L1Md_T LINE L1 0 6582 5865 4 1174 15965 46 0 0 chr17 77262724 77264760 -18007891 + L1_Mm LINE L1 1225 3260 -2623 4 1174 256 295 45 37 chr17 77264887 77265021 -18007630 - L1MA4 LINE L1 -361 5939 5805 4 1174 222 37 0 0 chr17 77265022 77265049 -18007602 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1174 282 261 92 45 chr17 77265092 77265315 -18007336 - L1MA4 LINE L1 -453 5727 5494 4 1174 23 54 0 0 chr17 77265362 77265399 -18007252 + AT_rich Low_complexity Low_complexity 1 37 0 4 1174 21 0 0 0 chr17 77265514 77265535 -18007116 + AT_rich Low_complexity Low_complexity 1 21 0 4 1174 364 148 12 0 chr17 77266083 77266164 -18006487 - Lx3A LINE L1 -2 6979 6898 4 1174 285 110 48 24 chr17 77266652 77266736 -18005915 + (TA)n Simple_repeat Simple_repeat 1 86 0 4 1174 3607 42 7 0 chr17 77267773 77268206 -18004445 + RLTR10C LTR ERVK 1 436 0 4 1174 22 70 0 0 chr17 77269632 77269675 -18002976 + AT_rich Low_complexity Low_complexity 1 43 0 4 1174 238 172 178 33 chr17 77269998 77270088 -18002563 + Lx9 LINE L1 7542 7644 0 4 1174 1501 261 97 59 chr17 77270216 77270579 -18002072 + RMER4B LTR ERVK 7 377 -208 4 1174 988 90 15 0 chr17 77270579 77270713 -18001938 + B1_Mm SINE Alu 1 136 -11 4 1174 780 11 0 0 chr17 77270713 77270802 -18001849 + (GAAA)n Simple_repeat Simple_repeat 3 91 0 4 1174 1501 261 97 59 chr17 77270802 77270995 -18001656 + RMER4B LTR ERVK 378 584 -1 4 1174 478 322 24 5 chr17 77271320 77271529 -18001122 - B3 SINE B2 -3 213 1 4 1174 22 35 0 0 chr17 77271678 77271707 -18000944 + AT_rich Low_complexity Low_complexity 1 29 0 4 1174 717 117 0 0 chr17 77271776 77271904 -18000747 + (TC)n Simple_repeat Simple_repeat 1 128 0 4 1174 36 23 0 0 chr17 77272283 77272326 -18000325 + AT_rich Low_complexity Low_complexity 1 43 0 4 1174 207 88 0 0 chr17 77272508 77272542 -18000109 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 4 1174 324 143 0 0 chr17 77272609 77272679 -17999972 + (TCTG)n Simple_repeat Simple_repeat 4 73 0 4 1174 268 299 59 48 chr17 77272722 77272908 -17999743 + L1MC LINE L1 3617 3804 -2342 4 1174 228 35 0 0 chr17 77272940 77272969 -17999682 + (TTAA)n Simple_repeat Simple_repeat 2 30 0 4 1174 3038 241 41 29 chr17 77272969 77273924 -17998727 - Lx4B LINE L1 -31 6969 5973 4 1174 2392 188 9 4 chr17 77273924 77274384 -17998267 - Lx4B LINE L1 -7 5870 5409 4 1174 655 238 191 0 chr17 77274460 77274649 -17998002 + URR1B DNA MER1_type 1 225 0 4 1174 323 323 89 22 chr17 77274911 77275136 -17997515 + L1M2 LINE L1 4204 4443 -1700 4 1174 341 315 93 39 chr17 77275125 77275459 -17997192 + L1M4 LINE L1 4359 4710 -1436 4 1174 1109 44 0 0 chr17 77275915 77276052 -17996599 + B1_Mus1 SINE Alu 2 138 -10 4 1174 279 0 0 0 chr17 77276052 77276083 -17996568 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1174 200 86 0 28 chr17 77276910 77276946 -17995705 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1174 1011 126 0 0 chr17 77277359 77277518 -17995133 + (TTTC)n Simple_repeat Simple_repeat 2 160 0 4 1174 4933 98 4 11 chr17 77277527 77278228 -17994423 - Lx3_Mus LINE L1 0 7009 6314 4 1174 720 228 12 91 chr17 77278228 77278616 -17994035 + L1_Mur1 LINE L1 1 314 -6668 4 1174 597 52 0 0 chr17 77278629 77278706 -17993945 + (TTTC)n Simple_repeat Simple_repeat 3 79 0 4 1174 22 103 0 0 chr17 77278707 77278785 -17993866 + AT_rich Low_complexity Low_complexity 1 78 0 4 1174 21 71 0 0 chr17 77279527 77279569 -17993082 + AT_rich Low_complexity Low_complexity 1 42 0 4 1174 180 0 0 0 chr17 77279896 77279916 -17992735 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 1174 5290 84 42 0 chr17 77279935 77280675 -17991976 + L1_Mus3 LINE L1 5853 6623 -15 4 1174 1146 62 7 0 chr17 77280675 77280821 -17991830 + B1_Mus2 SINE Alu 1 147 0 4 1174 919 106 0 13 chr17 77280824 77280977 -17991674 + (GAAA)n Simple_repeat Simple_repeat 2 152 0 4 1174 1839 315 40 16 chr17 77281922 77282666 -17989985 - Lx5 LINE L1 -18 7032 6439 4 1174 21 0 0 0 chr17 77283421 77283442 -17989209 + AT_rich Low_complexity Low_complexity 1 21 0 4 1174 73 84 0 0 chr17 77283745 77283923 -17988728 + AT_rich Low_complexity Low_complexity 1 178 0 4 1174 248 306 88 117 chr17 77284941 77285078 -17987573 + B4 SINE B4 13 145 -147 4 1174 715 248 94 44 chr17 77285233 77285553 -17987098 + L1_Mur3 LINE L1 4330 4665 -1215 4 1174 468 119 0 0 chr17 77285947 77286014 -17986637 - L1_Mus3 LINE L1 -358 6280 6214 4 1174 2310 116 14 3 chr17 77286014 77286368 -17986283 + L1_Mus3 LINE L1 6274 6631 -7 4 1174 651 65 0 0 chr17 77287462 77287555 -17985096 + (TC)n Simple_repeat Simple_repeat 2 94 0 4 1174 3130 168 63 35 chr17 77287555 77288161 -17984490 + RLTR26 LTR ERVK 7 629 -13 4 1174 459 0 0 0 chr17 77288162 77288213 -17984438 + (TC)n Simple_repeat Simple_repeat 1 51 0 4 1174 393 208 93 43 chr17 77288213 77288374 -17984277 - RMER17C LTR ERVK -139 271 103 4 1174 23 0 0 0 chr17 77288783 77288806 -17983845 + AT_rich Low_complexity Low_complexity 1 23 0 4 1174 25 0 0 0 chr17 77289633 77289658 -17982993 + AT_rich Low_complexity Low_complexity 1 25 0 4 1174 756 33 0 0 chr17 77289953 77290044 -17982607 + (TTCC)n Simple_repeat Simple_repeat 3 93 0 4 1174 222 37 0 0 chr17 77290047 77290074 -17982577 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 4 1174 699 215 0 0 chr17 77290074 77290204 -17982447 - B1_Mus2 SINE Alu -13 134 5 4 1174 360 180 0 33 chr17 77290244 77290336 -17982315 - Lx2B LINE L1 0 7000 6912 4 1174 1402 212 97 55 chr17 77290342 77290877 -17981774 - BGLII_B LTR ERVK -6 435 1 4 1174 28 0 0 0 chr17 77291807 77291835 -17980816 + AT_rich Low_complexity Low_complexity 1 28 0 4 1174 369 221 65 1 chr17 77292054 77292163 -17980488 + Lx7 LINE L1 4260 4404 -1739 4 1174 4249 217 29 10 chr17 77292179 77293189 -17979462 + Lx7 LINE L1 4624 5652 -228 4 1174 39958 16 6 6 chr17 77293188 77299540 -17973111 - L1Md_A LINE L1 0 6582 235 4 1174 5911 265 62 36 chr17 77299541 77300898 -17971753 + Lx7 LINE L1 5644 7045 -651 4 1174 3042 93 2 30 chr17 77300898 77301362 -17971289 - Lx3_Mus LINE L1 0 7009 6559 4 1174 5911 265 62 36 chr17 77301362 77301672 -17970979 + Lx7 LINE L1 7046 7367 -329 4 1174 207 0 0 0 chr17 77301672 77301695 -17970956 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 1174 5911 265 62 36 chr17 77301695 77302010 -17970641 + Lx7 LINE L1 7368 7679 -17 4 1174 512 15 15 0 chr17 77302020 77302085 -17970566 + (CATA)n Simple_repeat Simple_repeat 2 67 0 4 1174 273 339 16 24 chr17 77302187 77302311 -17970340 - RMER15 LTR ERVL -37 538 416 4 1174 363 324 141 34 chr17 77302438 77302700 -17969951 - B4A SINE B4 0 292 3 4 1174 450 0 0 0 chr17 77302736 77302786 -17969865 + (TA)n Simple_repeat Simple_repeat 1 50 0 4 1174 698 346 92 14 chr17 77304081 77304450 -17968201 - Lx8 LINE L1 -885 6588 6191 4 1174 2326 235 120 26 chr17 77304519 77304792 -17967859 - Lx9 LINE L1 0 7644 7344 4 1174 630 0 0 0 chr17 77304792 77304862 -17967789 + (TC)n Simple_repeat Simple_repeat 1 70 0 4 1174 2326 235 120 26 chr17 77304862 77305396 -17967255 - Lx9 LINE L1 -301 7343 6762 4 1174 396 0 0 0 chr17 77305605 77305649 -17967002 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1174 225 119 0 63 chr17 77305931 77305994 -17966657 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 4 1174 237 300 7 128 chr17 77306951 77307100 -17965551 - L1MDa LINE L1 -5754 879 749 4 1174 468 0 0 0 chr17 77307610 77307662 -17964989 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 1174 247 306 54 76 chr17 77307667 77307759 -17964892 - B2_Mm2 SINE B2 -103 92 3 4 1174 21 0 0 0 chr17 77308060 77308081 -17964570 + AT_rich Low_complexity Low_complexity 1 21 0 4 1174 504 111 0 0 chr17 77308616 77308697 -17963954 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 4 1174 183 250 0 0 chr17 77309576 77309616 -17963035 + MIR SINE MIR 105 144 -64 4 1174 488 344 30 55 chr17 77309811 77310011 -17962640 - B3A SINE B2 -3 195 1 4 1174 6397 71 11 2 chr17 77310150 77310980 -17961671 + L1Md_F2 LINE L1 5733 6569 -13 4 1174 347 191 59 7 chr17 77312308 77312461 -17960190 + (TA)n Simple_repeat Simple_repeat 2 162 0 4 1174 291 100 14 28 chr17 77312472 77312544 -17960107 + (TA)n Simple_repeat Simple_repeat 1 71 0 4 1174 2952 42 76 3 chr17 77313154 77313537 -17959114 + IAPLTR2a LTR ERVK 1 411 0 4 1174 22 0 0 0 chr17 77313794 77313816 -17958835 + AT_rich Low_complexity Low_complexity 1 22 0 4 1174 2853 165 14 0 chr17 77314013 77314497 -17958154 - Lx4A LINE L1 -66 6992 6502 4 1174 2358 127 31 2 chr17 77314490 77314915 -17957736 - L1_Mur2 LINE L1 -4149 1728 1292 4 1174 9771 101 21 6 chr17 77314936 77316021 -17956630 - Lx3_Mus LINE L1 0 7009 5909 4 1174 675 37 0 0 chr17 77316021 77316103 -17956548 + (TTC)n Simple_repeat Simple_repeat 2 83 0 4 1174 9771 95 8 46 chr17 77316103 77317362 -17955289 - Lx3_Mus LINE L1 -1101 5908 4673 4 1174 247 91 0 0 chr17 77317362 77317395 -17955256 + U2 snRNA snRNA 1 33 -155 4 1174 9771 95 8 46 chr17 77317395 77317413 -17955238 - Lx3_Mus LINE L1 -1101 4672 4654 4 1174 1066 102 0 13 chr17 77317413 77317562 -17955089 + B1_Mm SINE Alu 1 147 0 4 1174 9663 95 7 47 chr17 77317562 77317770 -17954881 - Lx3_Mus LINE L1 -1233 4653 4452 4 1174 2147 171 3 7 chr17 77317737 77318162 -17954489 - L1_Mur2 LINE L1 -6445 1283 793 4 1174 359 159 19 0 chr17 77318164 77318271 -17954380 + (TCTCTG)n Simple_repeat Simple_repeat 5 113 0 4 1174 529 252 0 0 chr17 77318273 77318384 -17954267 - L1_Mur2 LINE L1 -6268 818 708 4 1174 247 301 44 9 chr17 77318654 77318768 -17953883 - Lx7 LINE L1 -334 7362 7245 4 1174 435 68 0 0 chr17 77318980 77319039 -17953612 + (TA)n Simple_repeat Simple_repeat 1 59 0 4 1174 4801 139 16 21 chr17 77319679 77320396 -17952255 - L1_Mus4 LINE L1 -8 6628 5914 4 1174 267 31 0 0 chr17 77320396 77320428 -17952223 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 1174 4801 139 16 21 chr17 77320428 77320512 -17952139 - L1_Mus4 LINE L1 -723 5913 5832 4 1174 1186 154 45 5 chr17 77320516 77320738 -17951913 - L1Md_F2 LINE L1 0 6582 6352 5 1174 23766 117 12 8 chr17 77320739 77325083 -17947568 - L1Md_F LINE L1 -1299 4584 234 5 1174 661 48 0 0 chr17 77325083 77325167 -17947484 - Lx LINE L1 -812 5842 5759 5 1174 310 341 96 3 chr17 77325285 77325609 -17947042 - L1MB8 LINE L1 -216 5962 5609 5 1174 431 323 38 0 chr17 77326583 77326716 -17945935 + B1F SINE Alu 12 149 0 5 1174 240 226 0 0 chr17 77327432 77327485 -17945166 + A-rich Low_complexity Low_complexity 1 53 0 5 1174 204 122 0 0 chr17 77327782 77327823 -17944828 + (A)n Simple_repeat Simple_repeat 1 41 0 5 1174 7345 74 6 28 chr17 77328631 77329690 -17942961 + L1_Mus1 LINE L1 5533 6567 0 5 1174 1125 76 17 11 chr17 77329977 77330151 -17942500 + (GAAA)n Simple_repeat Simple_repeat 1 175 0 5 1174 210 191 0 0 chr17 77330160 77330207 -17942444 + GA-rich Low_complexity Low_complexity 2 48 0 5 1174 277 308 27 20 chr17 77330235 77330384 -17942267 + L1MD1 LINE L1 5831 5980 -262 5 1174 228 198 19 38 chr17 77330403 77330426 -17942225 + (TG)n Simple_repeat Simple_repeat 1 21 0 5 1174 531 0 0 0 chr17 77330426 77330485 -17942166 + (GA)n Simple_repeat Simple_repeat 2 60 0 5 1174 228 198 19 38 chr17 77330485 77330566 -17942085 + (TG)n Simple_repeat Simple_repeat 1 82 0 5 1174 21 0 0 0 chr17 77331127 77331148 -17941503 + AT_rich Low_complexity Low_complexity 1 21 0 5 1174 420 20 0 0 chr17 77331656 77331705 -17940946 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1174 684 126 8 8 chr17 77331706 77331826 -17940825 - Lx LINE L1 -15 6639 6520 5 146 770 312 106 33 chr17 77331892 77332657 -17939994 + L1_Mur3 LINE L1 3098 3918 -2222 5 1175 485 289 120 47 chr17 77332687 77333221 -17939430 + L1_Mur3 LINE L1 4160 4734 -1409 5 1175 2577 283 41 26 chr17 77333238 77334087 -17938564 - Tigger1 DNA MER2_type -1553 865 4 5 1175 29 0 0 0 chr17 77334514 77334543 -17938108 + AT_rich Low_complexity Low_complexity 1 29 0 5 1175 325 390 87 80 chr17 77334636 77334923 -17937728 + B4 SINE B4 2 290 -2 5 1175 351 0 0 0 chr17 77334934 77334973 -17937678 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1175 219 114 0 0 chr17 77335005 77335040 -17937611 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 5 1175 289 117 16 16 chr17 77335066 77335127 -17937524 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 1175 184 183 54 0 chr17 77335204 77335297 -17937354 + (TA)n Simple_repeat Simple_repeat 2 99 0 5 1175 237 136 23 0 chr17 77335343 77335387 -17937264 + MusHAL1 LINE L1 195 239 -3115 5 1175 3200 145 28 40 chr17 77335385 77335953 -17936698 + L1VL4 LINE L1 210 770 -5532 5 1175 10232 167 15 85 chr17 77336439 77338804 -17933847 + Lx LINE L1 3706 5882 -772 5 1175 3404 35 0 0 chr17 77338804 77339200 -17933451 + MTA_Mm LTR MaLR 1 396 0 5 1175 9516 21 1 0 chr17 77339200 77340297 -17932354 + MTA_Mm-int LTR MaLR 1 1098 0 5 1175 3407 33 0 0 chr17 77340297 77340691 -17931960 + MTA_Mm LTR MaLR 1 394 -2 5 1175 6231 150 22 23 chr17 77340691 77341455 -17931196 + Lx LINE L1 5883 6650 -4 5 1175 968 306 18 27 chr17 77341588 77341926 -17930725 + ORR1A2 LTR MaLR 24 370 0 5 1175 3933 271 43 26 chr17 77341934 77343038 -17929613 + ORR1A2-int LTR MaLR 9 1131 -239 5 1175 26 64 0 0 chr17 77343104 77343151 -17929500 + AT_rich Low_complexity Low_complexity 1 47 0 5 1175 1723 179 25 3 chr17 77343266 77343586 -17929065 + ORR1A2 LTR MaLR 1 327 0 5 1175 22 70 0 0 chr17 77344773 77344816 -17927835 + AT_rich Low_complexity Low_complexity 1 43 0 5 1175 630 255 37 22 chr17 77345013 77345242 -17927409 - L1_Mur3 LINE L1 -194 5686 5463 5 1175 237 289 53 0 chr17 77345242 77345318 -17927333 + B4A SINE B4 209 288 -4 5 1175 278 281 11 0 chr17 77345329 77345418 -17927233 + (CA)n Simple_repeat Simple_repeat 2 91 0 5 1175 799 193 18 3 chr17 77345429 77345773 -17926878 + (CA)n Simple_repeat Simple_repeat 1 349 0 5 1175 536 346 51 22 chr17 77345788 77346063 -17926588 - MLT1A0 LTR MaLR -62 303 21 5 1175 262 246 72 0 chr17 77346668 77346737 -17925914 + Lx8 LINE L1 5842 5915 -1558 5 1175 1075 156 0 5 chr17 77346866 77347053 -17925598 + B2_Mm2 SINE B2 1 186 -9 5 1175 1791 329 140 19 chr17 77347122 77348349 -17924302 + Lx8 LINE L1 6089 7464 -9 5 1175 227 182 58 105 chr17 77348649 77348735 -17923916 + MTB LTR MaLR 49 130 -270 5 1175 3315 133 14 6 chr17 77348744 77349566 -17923085 + L1VL4 LINE L1 372 1200 -2359 5 1175 258 32 0 0 chr17 77349582 77349613 -17923038 + (TTAA)n Simple_repeat Simple_repeat 3 33 0 5 1175 351 383 13 31 chr17 77349629 77349788 -17922863 - RSINE1 SINE B4 -8 157 2 5 1175 331 294 61 81 chr17 77350027 77350175 -17922476 + B3A SINE B2 47 191 -7 5 1175 24 0 0 0 chr17 77351537 77351561 -17921090 + AT_rich Low_complexity Low_complexity 1 24 0 5 1175 2260 68 7 10 chr17 77351561 77351871 -17920780 - L1_Mus3 LINE L1 -3 6635 6327 5 1175 1904 79 0 22 chr17 77351871 77352144 -17920507 + L1_Mus3 LINE L1 5852 6118 -520 5 1175 369 401 24 39 chr17 77352362 77352567 -17920084 - MTEa LTR MaLR -167 212 11 5 1175 21 0 0 0 chr17 77352703 77352724 -17919927 + AT_rich Low_complexity Low_complexity 1 21 0 5 1175 670 59 0 38 chr17 77353026 77353132 -17919519 + (GAAAA)n Simple_repeat Simple_repeat 2 103 0 5 1175 211 136 23 0 chr17 77353720 77353764 -17918887 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 5 1175 23 97 0 0 chr17 77353923 77353995 -17918656 + AT_rich Low_complexity Low_complexity 1 72 0 5 1175 22 0 0 0 chr17 77354801 77354823 -17917828 + AT_rich Low_complexity Low_complexity 1 22 0 5 1175 183 80 0 0 chr17 77355284 77355309 -17917342 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 5 1175 256 227 79 0 chr17 77355463 77355542 -17917109 - B2_Mm2 SINE B2 0 193 113 5 1175 3654 236 95 17 chr17 77355543 77356468 -17916183 + Lx5 LINE L1 6051 7047 -3 5 1175 300 139 38 0 chr17 77357936 77358015 -17914636 + (TA)n Simple_repeat Simple_repeat 1 82 0 5 1175 321 303 99 118 chr17 77358932 77359246 -17913405 + RLTR17 LTR ERVK 115 422 -270 5 1175 949 118 0 0 chr17 77359759 77359895 -17912756 + B1_Mus1 SINE Alu 1 136 -12 5 1175 261 0 0 0 chr17 77359896 77359925 -17912726 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1175 228 329 13 0 chr17 77360705 77360781 -17911870 + B1_Mur1 SINE Alu 70 146 -3 5 1175 4579 247 70 11 chr17 77362405 77364010 -17908641 + Lx5 LINE L1 5341 7039 -11 5 1175 34 42 0 0 chr17 77364152 77364200 -17908451 + AT_rich Low_complexity Low_complexity 1 48 0 5 1175 23 0 0 0 chr17 77364493 77364516 -17908135 + AT_rich Low_complexity Low_complexity 1 23 0 5 1175 216 383 12 0 chr17 77368032 77368113 -17904538 - B4A SINE B4 -207 85 4 5 1175 21 0 0 0 chr17 77369065 77369086 -17903565 + AT_rich Low_complexity Low_complexity 1 21 0 5 1175 450 0 0 0 chr17 77369914 77369964 -17902687 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1175 215 255 0 0 chr17 77369968 77370015 -17902636 + (CATATA)n Simple_repeat Simple_repeat 3 49 0 5 1175 26 0 0 0 chr17 77370750 77370776 -17901875 + AT_rich Low_complexity Low_complexity 1 26 0 5 1175 592 163 13 0 chr17 77370891 77371044 -17901607 + (TG)n Simple_repeat Simple_repeat 2 156 0 5 1175 495 228 122 6 chr17 77371044 77371225 -17901426 - Lx9 LINE L1 -126 7518 7317 5 1175 26 30 0 0 chr17 77371535 77371568 -17901083 + AT_rich Low_complexity Low_complexity 1 33 0 5 1175 608 246 0 0 chr17 77371644 77371774 -17900877 - B3 SINE B2 -84 132 3 5 1175 7700 16 0 0 chr17 77372436 77373352 -17899299 + MT-int LTR MaLR 6 921 -177 5 1175 285 51 0 0 chr17 77373367 77373406 -17899245 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 5 1175 1196 85 0 0 chr17 77373406 77373562 -17899089 - B2_Mm2 SINE B2 -35 160 5 5 1175 238 322 28 106 chr17 77373794 77374001 -17898650 + B3A SINE B2 1 195 0 5 1175 27 29 0 0 chr17 77374511 77374545 -17898106 + AT_rich Low_complexity Low_complexity 1 34 0 5 1175 293 327 0 66 chr17 77374646 77374767 -17897884 + MLT2D LTR ERVL 446 558 -2 5 1175 31 0 0 0 chr17 77375029 77375060 -17897591 + AT_rich Low_complexity Low_complexity 1 31 0 5 1175 21 0 0 0 chr17 77376260 77376281 -17896370 + AT_rich Low_complexity Low_complexity 1 21 0 5 1175 291 308 53 23 chr17 77376359 77376492 -17896159 - MLT2B4 LTR ERVL -355 201 65 5 1175 31 26 0 0 chr17 77376698 77376736 -17895915 + AT_rich Low_complexity Low_complexity 1 38 0 5 1175 23 33 0 0 chr17 77377540 77377570 -17895081 + AT_rich Low_complexity Low_complexity 1 30 0 5 1175 215 368 30 50 chr17 77377570 77377670 -17894981 - RSINE1 SINE B4 -2 163 66 5 1175 2139 43 0 4 chr17 77377843 77378102 -17894549 + L1Md_F2 LINE L1 5329 5586 -297 5 1175 8089 46 2 3 chr17 77378102 77379099 -17893552 + L1Md_F2 LINE L1 5587 6582 0 5 1175 441 0 0 0 chr17 77379707 77379756 -17892895 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1175 382 165 0 81 chr17 77379758 77379844 -17892807 + B1F1 SINE Alu 71 149 0 5 1175 238 197 53 0 chr17 77379845 77379921 -17892730 + (CAAA)n Simple_repeat Simple_repeat 1 80 0 5 1175 1017 62 0 0 chr17 77380149 77380277 -17892374 + B1_Mus2 SINE Alu 2 129 -18 5 1175 697 40 92 121 chr17 77380277 77380452 -17892199 + L1Md_F3 LINE L1 6445 6584 0 5 1175 273 345 18 35 chr17 77380454 77380568 -17892083 - MER5A1 DNA MER1_type -16 150 39 5 1175 500 103 0 33 chr17 77381162 77381252 -17891399 + (TCCCC)n Simple_repeat Simple_repeat 5 91 0 5 1175 239 225 14 27 chr17 77381252 77381325 -17891326 + T-rich Low_complexity Low_complexity 3 74 0 5 1175 1374 119 5 19 chr17 77383601 77383815 -17888836 + L1_Mus4 LINE L1 6187 6397 -239 5 1175 2544 188 9 0 chr17 77383810 77384267 -17888384 - Lx2B LINE L1 -121 6879 6419 5 1175 728 262 37 46 chr17 77384267 77384483 -17888168 - RLTR20B2 LTR ERVK -346 214 1 5 1175 341 345 18 0 chr17 77385021 77385131 -17887520 + B3A SINE B2 2 113 -85 5 1175 5800 126 22 7 chr17 77385351 77386308 -17886343 + Lx3_Mus LINE L1 6039 7009 0 5 1175 3279 148 13 1 chr17 77386328 77387124 -17885527 + Lx3C LINE L1 5359 6163 -813 5 1175 2788 160 67 34 chr17 77387119 77387655 -17884996 + Lx3C LINE L1 6415 6968 -8 5 1175 741 164 20 40 chr17 77388283 77388435 -17884216 - URR1A DNA MER1_type 0 226 78 6 1175 21 0 0 0 chr17 77390178 77390199 -17882452 + AT_rich Low_complexity Low_complexity 1 21 0 6 1175 249 360 31 31 chr17 77390912 77391041 -17881610 - LTR89 LTR ERVL? -53 826 698 6 1175 646 226 78 12 chr17 77391298 77391464 -17881187 + B2_Mm2 SINE B2 14 190 -5 6 1175 1692 199 64 23 chr17 77391501 77391846 -17880805 - ORR1B1 LTR MaLR 0 394 36 6 1175 8286 68 4 0 chr17 77391849 77392931 -17879720 + L1Md_F2 LINE L1 4500 5585 -298 6 1175 7682 68 0 0 chr17 77392932 77393916 -17878735 + L1Md_F2 LINE L1 5587 6570 -12 6 1175 2642 29 0 0 chr17 77394206 77394518 -17878133 + L1Md_T LINE L1 6270 6581 -1 6 1175 553 340 93 42 chr17 77394690 77395120 -17877531 + MLT1D LTR MaLR 54 505 0 6 1175 668 103 9 0 chr17 77395249 77395356 -17877295 + (TA)n Simple_repeat Simple_repeat 2 109 0 6 1175 1046 133 0 16 chr17 77395365 77395548 -17877103 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 6 1175 252 297 144 27 chr17 77395742 77395929 -17876722 + Lx8 LINE L1 7265 7473 0 6 1175 642 26 0 0 chr17 77396757 77396833 -17875818 + (TG)n Simple_repeat Simple_repeat 2 77 0 6 1175 23 54 0 0 chr17 77397281 77397318 -17875333 + AT_rich Low_complexity Low_complexity 1 37 0 6 1175 837 179 173 0 chr17 77397718 77397897 -17874754 + URR1A DNA MER1_type 1 210 -16 6 1175 384 103 0 0 chr17 77397978 77398036 -17874615 + (TATG)n Simple_repeat Simple_repeat 2 59 0 6 1175 305 299 170 28 chr17 77398067 77398208 -17874443 - L1MD3 LINE L1 -1326 6669 6509 6 1175 567 161 11 35 chr17 77398225 77398399 -17874252 + CT-rich Low_complexity Low_complexity 4 173 0 6 1175 381 333 101 51 chr17 77398908 77399762 -17872889 - L1MD3 LINE L1 -743 5403 4502 6 1175 21 0 0 31 chr17 77400256 77400267 -17872384 + AT_rich Low_complexity Low_complexity 1 11 0 6 1175 898 107 182 0 chr17 77400267 77400426 -17872225 - B2_Mm2 SINE B2 -7 188 1 6 1175 21 0 0 31 chr17 77400426 77400446 -17872205 + AT_rich Low_complexity Low_complexity 1 20 0 6 1175 23 0 0 0 chr17 77400485 77400508 -17872143 + AT_rich Low_complexity Low_complexity 1 23 0 6 1175 274 301 40 40 chr17 77400513 77400662 -17871989 - L1MA6 LINE L1 -6 6294 6146 6 1175 7585 25 1 0 chr17 77400677 77401561 -17871090 - L1Md_T LINE L1 0 6582 5698 6 1175 271 314 41 10 chr17 77401659 77401855 -17870796 - L1MA6 LINE L1 -173 6127 5926 6 1175 1463 117 0 0 chr17 77401855 77402060 -17870591 + Lx2 LINE L1 6440 6644 -353 6 1175 896 165 78 55 chr17 77402059 77402277 -17870374 + Lx2 LINE L1 6775 6997 0 6 1175 1092 48 0 0 chr17 77402495 77402642 -17870009 + (TTTC)n Simple_repeat Simple_repeat 2 148 0 6 1175 978 84 28 14 chr17 77402646 77402790 -17869861 - B1_Mm SINE Alu 0 147 2 6 1175 354 274 17 80 chr17 77403148 77403386 -17869265 - L1MD3 LINE L1 -2562 3584 3362 6 1175 7533 169 20 6 chr17 77403527 77405480 -17867171 - Lx3C LINE L1 -3 6973 4994 6 1175 225 282 0 13 chr17 77405632 77405711 -17866940 - L1MC LINE L1 -3086 3060 2983 6 1175 331 288 76 0 chr17 77405729 77405847 -17866804 - L1MD3 LINE L1 -3221 2925 2799 6 1175 31991 88 14 6 chr17 77407335 77412313 -17860338 - L1Md_F2 LINE L1 0 6582 1587 6 1175 423 0 0 0 chr17 77412313 77412360 -17860291 + (TC)n Simple_repeat Simple_repeat 2 48 0 6 1175 31991 92 14 6 chr17 77412360 77412535 -17860116 - L1Md_F2 LINE L1 -4297 1586 1400 6 1175 413 36 0 18 chr17 77412535 77412591 -17860060 + (TTAGGG)n Simple_repeat Simple_repeat 4 58 0 6 1175 31991 122 77 1 chr17 77412591 77413427 -17859224 - L1Md_F2 LINE L1 -4484 1399 483 6 1175 1535 181 17 14 chr17 77413493 77413790 -17858861 + RLTR10E LTR ERVK 1 298 -13 6 1175 1454 229 24 80 chr17 77413850 77414225 -17858426 + ORR1B1 LTR MaLR 41 394 0 6 1175 429 20 0 0 chr17 77414269 77414319 -17858332 + (TC)n Simple_repeat Simple_repeat 2 51 0 6 1175 4901 126 21 23 chr17 77414352 77415147 -17857504 + Lx LINE L1 5844 6637 -17 6 1175 243 0 0 0 chr17 77415186 77415213 -17857438 + (GA)n Simple_repeat Simple_repeat 2 28 0 6 1175 335 345 40 13 chr17 77415443 77415593 -17857058 + LTR41B LTR ERVL 512 665 -93 6 1175 21 0 0 0 chr17 77417802 77417823 -17854828 + AT_rich Low_complexity Low_complexity 1 21 0 6 1175 22 35 0 0 chr17 77417907 77417936 -17854715 + AT_rich Low_complexity Low_complexity 1 29 0 6 1175 377 217 105 98 chr17 77418112 77418265 -17854386 - RSINE1 SINE B4 -1 164 11 6 1175 318 26 0 0 chr17 77418605 77418644 -17854007 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 1175 405 0 0 0 chr17 77418668 77418713 -17853938 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1175 754 234 0 0 chr17 77419846 77420004 -17852647 - URR1A DNA MER1_type -24 202 45 6 1175 201 39 0 0 chr17 77420196 77420222 -17852429 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 1175 1357 238 34 83 chr17 77420245 77420690 -17851961 + RLTR20B3 LTR ERVK 1 423 -154 6 1175 354 23 0 0 chr17 77420691 77420734 -17851917 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1175 276 30 0 0 chr17 77420968 77421001 -17851650 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1175 234 0 0 0 chr17 77421036 77421062 -17851589 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 1175 4467 45 25 0 chr17 77421111 77421669 -17850982 - L1Md_F3 LINE L1 -14 6570 5999 6 1175 458 339 57 20 chr17 77421954 77422198 -17850453 + MLT1B LTR MaLR 72 324 -66 6 1175 23 54 0 0 chr17 77422568 77422605 -17850046 + AT_rich Low_complexity Low_complexity 1 37 0 6 1175 420 197 32 8 chr17 77423204 77423327 -17849324 + (CATATA)n Simple_repeat Simple_repeat 1 126 0 6 1175 180 0 0 0 chr17 77423372 77423392 -17849259 + (TTTTG)n Simple_repeat Simple_repeat 4 23 0 6 1175 21 0 0 0 chr17 77423632 77423653 -17848998 + AT_rich Low_complexity Low_complexity 1 21 0 6 1175 480 271 46 50 chr17 77423711 77423952 -17848699 - L1M5 LINE L1 -1559 4587 4348 6 1175 609 14 0 0 chr17 77424144 77424214 -17848437 + (TA)n Simple_repeat Simple_repeat 2 71 0 6 1175 315 0 0 0 chr17 77424214 77424248 -17848403 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1175 296 164 0 37 chr17 77424537 77424619 -17848032 + T-rich Low_complexity Low_complexity 1 79 0 6 1175 1779 182 16 3 chr17 77424902 77425211 -17847440 + Lx4A LINE L1 6696 7008 -50 6 1175 24 32 0 0 chr17 77425220 77425251 -17847400 + AT_rich Low_complexity Low_complexity 1 31 0 6 1175 510 61 0 0 chr17 77425328 77425394 -17847257 + (TA)n Simple_repeat Simple_repeat 1 66 0 6 1175 2861 202 20 23 chr17 77425433 77426095 -17846556 + MurSatRep1 Unknown Unknown 109 768 -1369 6 1175 8373 38 0 0 chr17 77426092 77427162 -17845489 - L1Md_T LINE L1 0 6582 5513 6 1175 1163 89 0 22 chr17 77427168 77427352 -17845299 + (TA)n Simple_repeat Simple_repeat 1 180 0 6 1175 598 226 65 12 chr17 77427607 77427777 -17844874 + B2_Mm2 SINE B2 13 191 -4 6 1175 417 305 144 35 chr17 77428512 77428869 -17843782 - MER67C LTR ERV1 -257 404 107 6 1175 566 286 13 39 chr17 77428870 77429023 -17843628 + URR1B DNA MER1_type 1 149 -76 6 1175 759 110 22 14 chr17 77429032 77429068 -17843583 + (GGAGAA)n Simple_repeat Simple_repeat 4 39 0 6 1175 1221 67 0 22 chr17 77429068 77429252 -17843399 + (GGA)n Simple_repeat Simple_repeat 1 180 0 6 1175 759 110 22 14 chr17 77429252 77429353 -17843298 + (GGAGAA)n Simple_repeat Simple_repeat 4 106 0 6 1175 297 185 77 0 chr17 77429359 77429424 -17843227 + URR1B DNA MER1_type 139 208 -17 6 1175 386 321 62 13 chr17 77429636 77429863 -17842788 - ERVL-E-int LTR ERVL -393 5274 5037 6 1175 1062 308 97 17 chr17 77431075 77431497 -17841154 - LTR80A LTR ERVL -29 554 99 6 1175 466 324 73 52 chr17 77432201 77432648 -17840003 + MLT1C LTR MaLR 4 505 0 6 1175 1007 52 8 0 chr17 77433177 77433311 -17839340 + (TCTA)n Simple_repeat Simple_repeat 4 138 0 6 1175 447 52 0 0 chr17 77433314 77433372 -17839279 + (TG)n Simple_repeat Simple_repeat 1 58 0 6 1175 233 385 0 0 chr17 77434617 77434682 -17837969 + RSINE1 SINE B4 31 95 -70 6 1175 192 163 0 0 chr17 77434771 77434814 -17837837 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 1175 972 268 14 30 chr17 77434889 77435185 -17837466 + B4 SINE B4 2 292 0 6 1175 246 95 0 0 chr17 77435207 77435249 -17837402 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1175 399 364 8 0 chr17 77435264 77435382 -17837269 + RSINE1 SINE B4 11 129 -36 6 1175 427 163 8 8 chr17 77435412 77435536 -17837115 + CT-rich Low_complexity Low_complexity 1 124 0 6 1175 210 150 0 0 chr17 77435531 77435571 -17837080 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1175 1816 262 16 14 chr17 77435873 77436357 -17836294 - Lx6 LINE L1 -26 7434 6950 6 1175 191 61 0 29 chr17 77436572 77436606 -17836045 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 6 1175 16100 164 57 41 chr17 77436612 77438234 -17834417 - Lx2B LINE L1 -19 6981 5301 6 1175 2332 95 20 3 chr17 77438234 77438583 -17834068 - L1_Mus3 LINE L1 -7 6631 6277 6 1175 16100 187 32 159 chr17 77438583 77439147 -17833504 - Lx2B LINE L1 -586 5300 4737 6 1175 207 0 0 0 chr17 77439147 77439170 -17833481 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1175 16100 187 32 159 chr17 77439170 77439225 -17833426 - Lx2B LINE L1 -1150 4736 4684 6 1175 215 31 0 30 chr17 77439225 77439258 -17833393 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 6 1175 16100 187 32 159 chr17 77439258 77441186 -17831465 - Lx2B LINE L1 -1203 4683 3006 6 1175 494 157 0 10 chr17 77441186 77441289 -17831362 - L1_Mus4 LINE L1 -7 6629 6528 6 1175 16100 197 59 107 chr17 77441289 77444261 -17828390 - Lx2B LINE L1 -2881 3005 355 6 1175 239 360 131 0 chr17 77444883 77445036 -17827615 - MER58A DNA MER1_type -4 220 48 6 1175 231 342 119 42 chr17 77445435 77445459 -17827192 - L2a LINE L2 -2 3424 3405 6 1175 1491 219 87 16 chr17 77445459 77445839 -17826812 - MTB_Mm LTR MaLR 0 407 1 6 1175 231 342 119 42 chr17 77445839 77445982 -17826669 - L2a LINE L2 -22 3404 3244 6 1175 465 66 0 0 chr17 77446878 77446939 -17825712 + (TA)n Simple_repeat Simple_repeat 2 62 0 6 1175 318 340 92 22 chr17 77447451 77447722 -17824929 + B4A SINE B4 3 292 0 6 1175 666 246 0 0 chr17 77447780 77447902 -17824749 - B1_Mur2 SINE Alu -19 130 9 6 1175 599 117 10 0 chr17 77447926 77448029 -17824622 + (TTTTC)n Simple_repeat Simple_repeat 5 108 0 6 1175 23 78 0 0 chr17 77449011 77449062 -17823589 + AT_rich Low_complexity Low_complexity 1 51 0 6 1175 366 23 0 0 chr17 77449352 77449395 -17823256 + (TA)n Simple_repeat Simple_repeat 1 43 0 6 1175 21 36 0 0 chr17 77450050 77450078 -17822573 + AT_rich Low_complexity Low_complexity 1 28 0 6 1175 2883 178 58 40 chr17 77450924 77451574 -17821077 + RMER6C LTR ERVK 1 662 -28 6 1175 2019 171 28 70 chr17 77451576 77452003 -17820648 - RLTR19 LTR ERVK -2 497 89 6 1175 683 269 0 0 chr17 77452008 77452153 -17820498 - B3A SINE B2 -53 145 1 7 1175 21 36 0 0 chr17 77452168 77452196 -17820455 + AT_rich Low_complexity Low_complexity 1 28 0 7 1175 639 304 89 66 chr17 77452385 77452900 -17819751 + RLTR11A2 LTR ERVK 1 527 0 7 1175 630 39 0 0 chr17 77452900 77452978 -17819673 - L1_Mus1 LINE L1 -504 6063 5986 7 1175 1299 74 11 0 chr17 77452978 77453154 -17819497 + L1_Mus1 LINE L1 6388 6565 -2 7 1175 299 101 0 48 chr17 77453687 77453770 -17818881 + (TTTTG)n Simple_repeat Simple_repeat 1 79 0 7 1175 870 86 0 92 chr17 77453770 77453911 -17818740 - B1_Mm SINE Alu -2 145 18 7 1175 236 268 103 43 chr17 77453811 77453928 -17818723 - RLTR25B LTR ERVK -519 509 386 7 1175 23 0 0 0 chr17 77455377 77455400 -17817251 + AT_rich Low_complexity Low_complexity 1 23 0 7 1175 1608 174 11 77 chr17 77455462 77455811 -17816840 - ORR1A4 LTR MaLR -3 326 1 7 1175 23 33 0 0 chr17 77455866 77455896 -17816755 + AT_rich Low_complexity Low_complexity 1 30 0 7 1175 1369 300 16 13 chr17 77456128 77456506 -17816145 + MTE2a LTR MaLR 1 379 0 7 1175 27 0 0 0 chr17 77457116 77457143 -17815508 + AT_rich Low_complexity Low_complexity 1 27 0 7 1175 1852 202 44 21 chr17 77457148 77457532 -17815119 - Lx3C LINE L1 -18 6958 6566 7 1175 246 258 0 79 chr17 77457600 77457701 -17814950 - L3 LINE CR1 -270 4219 4127 7 1175 1369 237 43 43 chr17 77457795 77458143 -17814508 + ORR1B1 LTR MaLR 1 348 -46 7 1175 8049 197 33 16 chr17 77458143 77460032 -17812619 - Lx3C LINE L1 -1040 6010 4081 7 1175 3534 231 41 10 chr17 77460018 77460853 -17811798 + Lx5 LINE L1 6189 7049 -1 7 1175 252 59 0 0 chr17 77460952 77460986 -17811665 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 7 1175 197 316 55 79 chr17 77460986 77461113 -17811538 - L3 LINE CR1 -462 4027 3904 7 1175 1076 66 0 7 chr17 77462601 77462739 -17809912 - B1_Mm SINE Alu -10 137 1 7 1176 198 0 0 0 chr17 77463916 77463938 -17808713 + (A)n Simple_repeat Simple_repeat 1 22 0 7 1176 348 200 88 61 chr17 77464782 77465035 -17807616 - L1P5 LINE L1 -732 5571 5306 7 1176 230 0 33 0 chr17 77465035 77465065 -17807586 + (TTTG)n Simple_repeat Simple_repeat 3 33 0 7 1176 251 230 55 88 chr17 77465065 77465100 -17807551 - L1P5 LINE L1 -859 5305 5276 7 1176 385 325 29 6 chr17 77465073 77465243 -17807408 - L1_Rod LINE L1 -630 5217 5044 7 1176 452 343 68 54 chr17 77465780 77466060 -17806591 + ORR1E LTR MaLR 76 359 0 7 1176 250 340 21 0 chr17 77466217 77466314 -17806337 + Tigger16b DNA Tigger 227 325 -12 7 1176 310 357 59 41 chr17 77468315 77468534 -17804117 + MIRb SINE MIR 14 236 -32 7 1176 459 0 0 0 chr17 77468991 77469042 -17803609 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1176 459 0 0 0 chr17 77469042 77469092 -17803559 + (TA)n Simple_repeat Simple_repeat 1 51 0 7 1176 426 85 0 0 chr17 77469491 77469550 -17803101 + (TTG)n Simple_repeat Simple_repeat 2 60 0 7 1176 590 267 43 38 chr17 77469613 77469823 -17802828 + B3 SINE B2 1 211 -5 7 1176 1575 140 7 10 chr17 77469921 77470209 -17802442 + L1_Mus4 LINE L1 6343 6629 -7 7 1176 5029 146 30 11 chr17 77470467 77471335 -17801316 + Lx LINE L1 5768 6651 -3 7 1176 22 70 0 0 chr17 77471661 77471704 -17800947 + AT_rich Low_complexity Low_complexity 1 43 0 7 1176 23 0 0 0 chr17 77472005 77472028 -17800623 + AT_rich Low_complexity Low_complexity 1 23 0 7 1176 306 0 0 0 chr17 77473240 77473274 -17799377 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 1176 297 0 0 0 chr17 77474395 77474428 -17798223 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1176 231 36 0 0 chr17 77475265 77475293 -17797358 + (TA)n Simple_repeat Simple_repeat 2 29 0 7 1176 540 0 0 0 chr17 77475778 77475838 -17796813 + (TA)n Simple_repeat Simple_repeat 2 61 0 7 1176 22 70 0 0 chr17 77476423 77476466 -17796185 + AT_rich Low_complexity Low_complexity 1 43 0 7 1176 338 252 164 7 chr17 77476776 77476872 -17795779 - Lx6 LINE L1 -71 7389 7291 7 1176 1199 62 0 0 chr17 77476872 77477018 -17795633 + B1_Mm SINE Alu 1 146 -1 7 1176 338 252 164 7 chr17 77477018 77477073 -17795578 - Lx6 LINE L1 -170 7290 7254 7 1176 520 282 8 0 chr17 77477085 77477216 -17795435 - Lx6 LINE L1 -155 7305 7174 7 1176 4598 233 75 21 chr17 77477209 77478382 -17794269 - Lx6 LINE L1 -979 6481 5261 7 1176 276 30 0 0 chr17 77478382 77478415 -17794236 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 7 1176 4598 221 99 20 chr17 77478415 77479213 -17793438 - Lx6 LINE L1 -620 5260 4377 7 1176 5557 217 103 39 chr17 77479217 77480226 -17792425 - Lx6 LINE L1 -2766 3114 2087 7 1176 240 35 0 0 chr17 77480226 77480255 -17792396 + (TTG)n Simple_repeat Simple_repeat 2 30 0 7 1176 5557 236 81 39 chr17 77480255 77481378 -17791273 - Lx6 LINE L1 -3794 2086 860 7 1176 949 284 52 78 chr17 77481383 77482030 -17790621 - Lx6 LINE L1 -7091 637 17 7 1176 21 0 0 0 chr17 77482056 77482077 -17790574 + AT_rich Low_complexity Low_complexity 1 21 0 7 1176 220 161 0 31 chr17 77482329 77482393 -17790258 + CT-rich Low_complexity Low_complexity 1 62 0 7 1176 183 80 0 0 chr17 77482928 77482953 -17789698 + (TTTTC)n Simple_repeat Simple_repeat 5 29 0 7 1176 4284 96 10 8 chr17 77483218 77483846 -17788805 - L1_Mus3 LINE L1 -3 6635 6007 7 1176 270 0 0 0 chr17 77485002 77485032 -17787619 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 7 1176 985 31 16 8 chr17 77485047 77485176 -17787475 - L1Md_F2 LINE L1 -500 6082 5953 7 1176 317 212 61 17 chr17 77486772 77486887 -17785764 + Lx9 LINE L1 7448 7567 -77 7 1176 32 26 0 0 chr17 77487176 77487215 -17785436 + AT_rich Low_complexity Low_complexity 1 39 0 7 1176 387 0 0 0 chr17 77487218 77487261 -17785390 + (TA)n Simple_repeat Simple_repeat 1 43 0 7 1176 22 0 0 0 chr17 77487644 77487666 -17784985 + AT_rich Low_complexity Low_complexity 1 22 0 7 1176 1183 186 14 23 chr17 77488598 77488818 -17783833 - Lx6 LINE L1 -331 7129 6912 7 1176 536 29 0 14 chr17 77488818 77488874 -17783777 + (TC)n Simple_repeat Simple_repeat 1 56 0 7 1176 1138 91 11 11 chr17 77488874 77489052 -17783599 + (TCCC)n Simple_repeat Simple_repeat 3 180 0 7 1176 536 29 0 14 chr17 77489052 77489066 -17783585 + (TC)n Simple_repeat Simple_repeat 1 14 0 7 1176 327 25 0 0 chr17 77489074 77489114 -17783537 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 1176 256 254 0 90 chr17 77489119 77489197 -17783454 - Lx6 LINE L1 -600 6860 6790 7 1176 688 231 6 12 chr17 77489207 77489357 -17783294 + Lx6 LINE L1 7165 7315 -145 7 1176 3251 156 35 30 chr17 77489357 77489951 -17782700 - Lx LINE L1 0 6654 6058 7 1176 535 192 15 39 chr17 77489944 77490074 -17782577 + Lx6 LINE L1 7316 7442 -18 7 1176 877 182 116 5 chr17 77490118 77490317 -17782334 - Lx6 LINE L1 -3 6651 6431 7 1176 450 149 0 0 chr17 77490339 77490426 -17782225 + (GA)n Simple_repeat Simple_repeat 2 88 0 7 1176 190 51 0 71 chr17 77490923 77490965 -17781686 + (TAA)n Simple_repeat Simple_repeat 1 39 0 7 1176 4897 163 103 5 chr17 77490988 77492366 -17780285 - Lx3C LINE L1 -282 6694 5193 7 1176 667 267 78 5 chr17 77492395 77492659 -17779992 + Lx3C LINE L1 6694 6996 -4 7 1176 5103 61 3 0 chr17 77493669 77494337 -17778314 - L1_Mm LINE L1 -1006 4877 4208 7 1176 216 0 0 0 chr17 77495255 77495279 -17777372 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 7 1176 403 271 14 14 chr17 77495724 77495866 -17776785 + L1MA5 LINE L1 6148 6289 -11 7 1176 296 326 0 33 chr17 77495907 77496059 -17776592 + GA-rich Low_complexity Low_complexity 4 150 0 7 1176 277 310 52 125 chr17 77497061 77497293 -17775358 - MIR SINE MIR -9 253 39 7 1176 209 185 15 0 chr17 77497808 77497873 -17774778 + (TGAA)n Simple_repeat Simple_repeat 4 69 0 7 1176 267 31 0 0 chr17 77499603 77499635 -17773016 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 7 1176 1034 140 6 0 chr17 77499635 77499813 -17772838 + (TC)n Simple_repeat Simple_repeat 1 180 0 7 1176 667 219 6 6 chr17 77499821 77500000 -17772651 + CT-rich Low_complexity Low_complexity 2 180 0 7 1176 375 23 0 0 chr17 77500000 77500044 -17772607 + (TTCC)n Simple_repeat Simple_repeat 2 45 0 1 1176 267 309 130 0 chr17 77500425 77500548 -17772103 + L3 LINE CR1 4053 4191 -298 2 1176 1215 108 33 0 chr17 77503121 77503333 -17769318 + L1_Mus3 LINE L1 6413 6631 -7 3 1176 210 143 0 0 chr17 77503401 77503436 -17769215 + (A)n Simple_repeat Simple_repeat 1 35 0 4 1176 210 71 0 0 chr17 77503857 77503885 -17768766 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 5 1176 336 24 0 0 chr17 77506516 77506557 -17766094 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 6 1176 567 279 79 30 chr17 77507541 77507744 -17764907 + B3 SINE B2 1 213 -3 7 1176 218 56 28 0 chr17 77508015 77508051 -17764600 + (TA)n Simple_repeat Simple_repeat 2 38 0 8 1176 571 285 1 21 chr17 77508206 77508386 -17764265 + Lx8 LINE L1 5690 5888 -1585 9 1176 791 295 93 63 chr17 77508420 77509068 -17763583 + Lx9 LINE L1 6978 7644 0 1 1176 426 298 79 18 chr17 77510396 77510560 -17762091 + Lx7 LINE L1 7138 7311 -385 1 1176 183 42 0 0 chr17 77510563 77510587 -17762064 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1176 32 43 0 0 chr17 77510659 77510705 -17761946 + AT_rich Low_complexity Low_complexity 1 46 0 1 1176 5529 30 18 0 chr17 77510774 77511430 -17761221 - L1Md_F3 LINE L1 -16 6568 5901 1 1176 322 234 17 107 chr17 77511480 77511657 -17760994 + Lx9 LINE L1 7455 7615 -29 1 1176 21 57 0 0 chr17 77511772 77511807 -17760844 + AT_rich Low_complexity Low_complexity 1 35 0 1 1176 354 66 0 0 chr17 77512232 77512279 -17760372 - L1_Mus3 LINE L1 -139 6499 6458 1 1176 805 82 0 35 chr17 77512272 77512386 -17760265 + L1_Mus3 LINE L1 6371 6480 -158 1 1176 236 235 0 56 chr17 77512697 77512787 -17759864 + A-rich Low_complexity Low_complexity 4 88 0 1 1176 306 0 0 0 chr17 77512843 77512877 -17759774 + (TTA)n Simple_repeat Simple_repeat 3 36 0 1 1176 3593 132 42 2 chr17 77513623 77514191 -17758460 - Lx2 LINE L1 0 6997 6407 2 1176 297 128 0 0 chr17 77516022 77516069 -17756582 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 1176 202 292 38 0 chr17 77516988 77517094 -17755557 + (TATG)n Simple_repeat Simple_repeat 1 110 0 2 1176 413 343 21 7 chr17 77518041 77518182 -17754469 + ID_B1 SINE B4 82 224 0 2 1176 28 0 0 0 chr17 77519461 77519489 -17753162 + AT_rich Low_complexity Low_complexity 1 28 0 2 1176 3573 170 22 22 chr17 77519571 77520287 -17752364 + Lx4B LINE L1 5689 6404 -654 2 1176 9854 87 18 4 chr17 77520273 77521903 -17750748 + L1_Mus2 LINE L1 4473 6117 -449 2 1176 2922 239 52 17 chr17 77521978 77522684 -17749967 - Lx5 LINE L1 0 7050 6320 2 1176 1063 160 0 11 chr17 77522677 77522860 -17749791 + Lx5 LINE L1 5468 5648 -229 2 1176 600 154 25 25 chr17 77522848 77522863 -17749788 + Lx5 LINE L1 5787 5798 -1252 2 1176 216 0 0 0 chr17 77522863 77522887 -17749764 + (TA)n Simple_repeat Simple_repeat 2 25 0 2 1176 600 154 25 25 chr17 77522887 77522991 -17749660 + Lx5 LINE L1 5799 5905 -1145 2 1176 286 198 382 26 chr17 77522977 77523210 -17749441 + Lx4B LINE L1 6011 6326 -732 3 1176 284 195 0 38 chr17 77523197 77523277 -17749374 + L1M4b LINE L1 3565 3641 -3693 3 1176 226 326 37 7 chr17 77523292 77523428 -17749223 + L1M4 LINE L1 2684 2823 -3323 3 1176 274 345 32 40 chr17 77523446 77523570 -17749081 + B1F SINE Alu 19 141 -8 3 1176 777 309 85 36 chr17 77523771 77524077 -17748574 + MTE2a LTR MaLR 59 379 0 3 1176 248 147 53 0 chr17 77524078 77524153 -17748498 + (TAGA)n Simple_repeat Simple_repeat 2 80 0 3 1176 831 258 65 0 chr17 77525335 77525521 -17747130 + B3 SINE B2 8 205 -11 3 1176 431 223 9 0 chr17 77525620 77525732 -17746919 + (TA)n Simple_repeat Simple_repeat 2 114 0 3 1176 245 51 0 25 chr17 77526059 77526099 -17746552 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 3 1176 1178 179 78 4 chr17 77526818 77527048 -17745603 - Lx LINE L1 -20 6634 6388 3 1176 357 221 10 10 chr17 77527038 77527134 -17745517 - L1_Mur2 LINE L1 -631 5246 5151 4 1176 5053 250 19 10 chr17 77527131 77528316 -17744335 + Lx5 LINE L1 5845 7039 -11 4 1176 276 140 53 0 chr17 77528332 77528389 -17744262 + RLTR12A LTR ERVK 505 564 -4 4 1176 405 312 14 14 chr17 77528691 77528831 -17743820 - MER5A1 DNA MER1_type -25 141 2 4 1176 257 250 0 0 chr17 77530033 77530089 -17742562 + Lx5 LINE L1 6488 6543 -507 4 1176 1122 77 0 0 chr17 77530091 77530234 -17742417 + B1_Mm SINE Alu 2 144 -3 4 1176 656 227 0 22 chr17 77530254 77530389 -17742262 + Lx5 LINE L1 6531 6662 -388 4 1176 1155 195 18 0 chr17 77530476 77530697 -17741954 + URR1B DNA MER1_type 1 225 0 4 1176 458 285 27 80 chr17 77530817 77531004 -17741647 - RMER30 DNA MER1_type -1 201 25 4 1176 1415 33 0 5 chr17 77532619 77532830 -17739821 + (GAAA)n Simple_repeat Simple_repeat 1 210 0 4 1176 742 312 14 9 chr17 77533645 77533862 -17738789 + Lx8 LINE L1 6923 7140 -333 4 1176 22 0 0 0 chr17 77534509 77534531 -17738120 + AT_rich Low_complexity Low_complexity 1 22 0 5 1176 24 53 0 0 chr17 77534785 77534823 -17737828 + AT_rich Low_complexity Low_complexity 1 38 0 5 1176 213 39 0 0 chr17 77534916 77534942 -17737709 + (CATA)n Simple_repeat Simple_repeat 4 29 0 5 1176 1566 163 4 15 chr17 77534957 77535225 -17737426 - Lx LINE L1 -2 6652 6388 5 1176 207 0 0 0 chr17 77535225 77535248 -17737403 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1176 2328 156 8 0 chr17 77535254 77535361 -17737290 - Lx LINE L1 -261 6393 6286 5 1176 6363 41 0 0 chr17 77535361 77536125 -17736526 - L1Md_F3 LINE L1 -1 6583 5820 5 1176 2328 169 29 2 chr17 77536125 77536505 -17736146 - Lx LINE L1 -278 6288 5872 5 1176 312 212 0 0 chr17 77536519 77536585 -17736066 - L1_Mm LINE L1 -1318 4565 4500 5 1176 7164 175 20 14 chr17 77536546 77537918 -17734733 + L1_Mm LINE L1 4500 5879 -4 5 1176 227 339 90 34 chr17 77538067 77538333 -17734318 + L1MD2 LINE L1 48 328 -6219 5 1176 441 283 121 24 chr17 77538878 77539262 -17733389 + L1MD2 LINE L1 3671 4097 -2447 5 1176 227 282 0 86 chr17 77539267 77539360 -17733291 - Lx7 LINE L1 -248 7448 7364 5 1176 378 0 0 0 chr17 77539383 77539425 -17733226 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 1176 383 231 73 22 chr17 77539560 77539697 -17732954 + L1MD2 LINE L1 4120 4263 -2278 5 1176 454 237 54 81 chr17 77539984 77540283 -17732368 - RMER4B LTR ERVK -23 588 336 6 1176 853 231 62 48 chr17 77540324 77540551 -17732100 - RMER4B LTR ERVK -330 255 26 6 1176 512 318 66 25 chr17 77540587 77540829 -17731822 + MTE-int LTR MaLR 1259 1510 -70 6 1176 230 379 40 27 chr17 77540853 77541002 -17731649 + ORR1E LTR MaLR 10 160 -199 6 1176 306 0 0 0 chr17 77541899 77541933 -17730718 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1176 536 124 9 0 chr17 77541933 77542038 -17730613 + (GA)n Simple_repeat Simple_repeat 2 107 0 6 1176 530 251 15 15 chr17 77542110 77542229 -17730422 - B3A SINE B2 -80 118 3 6 1176 189 0 0 0 chr17 77542399 77542420 -17730231 + (TTAA)n Simple_repeat Simple_repeat 1 21 0 6 1176 222 91 0 0 chr17 77542586 77542619 -17730032 + (GAA)n Simple_repeat Simple_repeat 1 33 0 6 1176 349 336 82 70 chr17 77542720 77542976 -17729675 + RMER2 LTR ERV1 288 546 -21 6 1176 1234 335 30 9 chr17 77543331 77543867 -17728784 + MuRRS4-int LTR ERV1 3470 4016 -1047 6 1176 216 312 12 48 chr17 77544823 77544907 -17727744 + ID_B1 SINE B4 91 171 -53 7 1176 182 109 71 18 chr17 77544946 77545002 -17727649 + T-rich Low_complexity Low_complexity 2 60 0 7 1176 309 121 0 35 chr17 77545533 77545619 -17727032 + A-rich Low_complexity Low_complexity 2 84 0 7 1176 582 75 0 0 chr17 77546431 77546511 -17726140 + (TA)n Simple_repeat Simple_repeat 2 81 0 7 1176 243 0 0 0 chr17 77547503 77547530 -17725121 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 7 1176 256 318 30 0 chr17 77548548 77548614 -17724037 + RSINE1 SINE B4 78 145 -20 7 1176 279 0 0 0 chr17 77548757 77548788 -17723863 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 1176 489 348 22 84 chr17 77548816 77549042 -17723609 - B3A SINE B2 -4 212 1 7 1176 504 0 0 0 chr17 77549044 77549100 -17723551 + (TA)n Simple_repeat Simple_repeat 2 57 0 7 1176 453 15 45 0 chr17 77549119 77549185 -17723466 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 7 1176 206 241 42 84 chr17 77549300 77549395 -17723256 - L4 LINE RTE -1473 556 466 8 1176 246 273 9 92 chr17 77549505 77549614 -17723037 + YREP_Mm Unknown Unknown 197 296 -1516 8 1176 402 338 40 7 chr17 77549517 77549666 -17722985 - ID_B1 SINE B4 -26 198 45 8 1176 733 283 111 48 chr17 77549807 77550324 -17722327 - RMER4B LTR ERVK 0 585 1 8 1176 35 41 0 0 chr17 77550534 77550583 -17722068 + AT_rich Low_complexity Low_complexity 1 49 0 8 1176 2849 109 7 2 chr17 77550720 77551142 -17721509 + L1_Mus3 LINE L1 6213 6636 -2 8 1176 2582 89 3 21 chr17 77551589 77551978 -17720673 - L1_Mus4 LINE L1 0 6636 6255 8 1176 22 56 0 0 chr17 77552284 77552320 -17720331 + AT_rich Low_complexity Low_complexity 1 36 0 8 1176 2905 221 101 0 chr17 77552380 77552994 -17719657 + Lx5 LINE L1 6350 7025 -25 8 1176 21 71 0 0 chr17 77553008 77553050 -17719601 + AT_rich Low_complexity Low_complexity 1 42 0 8 1176 2472 248 50 22 chr17 77553066 77553929 -17718722 + Lx5 LINE L1 6125 7054 -4 9 1176 484 330 116 29 chr17 77554493 77554871 -17717780 + L1M5 LINE L1 4208 4618 -1528 9 1176 376 250 154 18 chr17 77554908 77554983 -17717668 - RLTR20A2 LTR ERVK -16 562 478 9 1176 405 0 0 0 chr17 77554983 77555028 -17717623 + (CA)n Simple_repeat Simple_repeat 2 46 0 9 1176 376 250 154 18 chr17 77555028 77555062 -17717589 - RLTR20A2 LTR ERVK -101 477 439 9 1176 255 281 31 15 chr17 77555078 77555143 -17717508 - RLTR20A2 LTR ERVK -296 272 207 9 1176 1959 222 52 24 chr17 77555143 77555776 -17716875 - MYSERV16_I-int LTR ERVK -1825 501 1 9 1176 289 314 45 51 chr17 77556279 77556457 -17716194 - MYSERV16_I-int LTR ERVK -2475 367 191 9 1176 544 255 47 33 chr17 77556647 77556739 -17715912 - RLTR20D LTR ERVK -4 574 488 9 1176 429 20 0 0 chr17 77556739 77556789 -17715862 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 1176 544 255 47 33 chr17 77556789 77556846 -17715805 - RLTR20D LTR ERVK -91 487 424 9 1176 628 330 17 57 chr17 77556832 77557131 -17715520 - RLTR20D LTR ERVK -281 287 1 9 1176 12137 107 11 19 chr17 77557495 77557760 -17714891 + Lx3_Mus LINE L1 3929 4190 -1696 9 1176 423 0 0 0 chr17 77557760 77557807 -17714844 + (TA)n Simple_repeat Simple_repeat 1 47 0 9 1176 12137 107 16 19 chr17 77557807 77559481 -17713170 + Lx3_Mus LINE L1 4191 5917 -1092 9 1176 1093 66 0 0 chr17 77559481 77559617 -17713034 + B1_Mus1 SINE Alu 1 136 -12 9 1176 7607 114 108 29 chr17 77559617 77559633 -17713018 + Lx3_Mus LINE L1 5918 5918 -1091 9 1176 441 0 0 0 chr17 77559633 77559682 -17712969 + (TAAAA)n Simple_repeat Simple_repeat 3 51 0 1 1176 7607 114 108 29 chr17 77559682 77560696 -17711955 + Lx3_Mus LINE L1 5918 6986 -23 9 1176 843 115 0 0 chr17 77560698 77560828 -17711823 + (GGAA)n Simple_repeat Simple_repeat 3 132 0 1 1176 2640 54 0 0 chr17 77560949 77561282 -17711369 - L1_Mm LINE L1 -392 5491 5159 1 1176 1248 50 83 0 chr17 77561282 77561488 -17711163 + L1Md_F3 LINE L1 6375 6584 0 1 1176 276 214 0 18 chr17 77561488 77561545 -17711106 - Lx9 LINE L1 -766 6878 6823 1 1176 654 322 112 9 chr17 77561585 77561908 -17710743 + Lx9 LINE L1 7062 7417 -227 1 1176 349 185 33 60 chr17 77561945 77562129 -17710522 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 1 1176 234 152 33 17 chr17 77562099 77562159 -17710492 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 1 1176 1244 333 22 37 chr17 77562994 77563584 -17709067 - Lx7 LINE L1 -300 7396 6816 1 1176 964 278 40 17 chr17 77563581 77563881 -17708770 + Lx7 LINE L1 6504 6810 -886 1 1176 349 353 28 70 chr17 77564242 77564385 -17708266 + B3 SINE B2 5 141 -75 1 1176 187 342 117 0 chr17 77564706 77564826 -17707825 - MIRb SINE MIR -32 236 103 1 1176 391 319 26 14 chr17 77565001 77565247 -17707404 - L1MA4 LINE L1 -412 5888 5588 1 1176 376 109 0 30 chr17 77565284 77565329 -17707322 - L1Md_F2 LINE L1 -503 6079 6035 1 1176 3661 76 0 10 chr17 77565329 77565823 -17706828 + L1Md_F2 LINE L1 6094 6582 0 1 1176 376 109 0 30 chr17 77565823 77565843 -17706808 - L1Md_F2 LINE L1 -548 6034 6016 1 1176 225 211 0 0 chr17 77565851 77565903 -17706748 + T-rich Low_complexity Low_complexity 1 52 0 1 1176 277 324 19 28 chr17 77565903 77566011 -17706640 - L1_Mm LINE L1 -333 5550 5444 1 1176 22 56 0 0 chr17 77566142 77566178 -17706473 + AT_rich Low_complexity Low_complexity 1 36 0 1 1176 3005 233 35 123 chr17 77568168 77570000 -17702651 + L1_Mur2 LINE L1 977 2621 -3256 1 1176 10392 148 22 10 chr17 77570003 77571921 -17700730 + L1_Mur2 LINE L1 2102 4042 -1835 1 1176 1093 186 0 14 chr17 77571918 77572125 -17700526 + Lx4A LINE L1 6063 6266 -792 1 1176 4643 99 33 7 chr17 77572138 77572870 -17699781 - L1_Mur1 LINE L1 -1977 3909 3159 1 1176 3825 194 60 3 chr17 77572867 77573607 -17699044 + Lx4A LINE L1 6273 7054 -4 1 1176 266 211 0 0 chr17 77573633 77573690 -17698961 + L1_Mur2 LINE L1 5285 5341 -536 1 1176 662 246 36 6 chr17 77573697 77573865 -17698786 + Lx4B LINE L1 6866 7038 -20 1 1176 324 0 0 0 chr17 77573865 77573901 -17698750 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 1176 309 320 55 16 chr17 77574490 77574617 -17698034 + LTR40b LTR ERVL 269 400 -62 1 1176 545 274 55 18 chr17 77575410 77575629 -17697022 - Lx7 LINE L1 -1732 5964 5738 1 1176 450 0 0 0 chr17 77575629 77575679 -17696972 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 1 1176 532 172 92 74 chr17 77575679 77575707 -17696944 - Lx5 LINE L1 -1311 5739 5717 1 1176 1832 328 73 17 chr17 77575844 77576772 -17695879 + Lx8 LINE L1 6259 7238 -235 1 1176 387 182 0 0 chr17 77576988 77577065 -17695586 + (TG)n Simple_repeat Simple_repeat 1 77 0 1 1176 21 0 0 0 chr17 77577459 77577480 -17695171 + AT_rich Low_complexity Low_complexity 1 21 0 1 1176 6217 80 6 2 chr17 77577515 77578342 -17694309 - L1Md_F2 LINE L1 -8 6574 5745 1 1176 376 250 34 0 chr17 77578352 77578440 -17694211 - RMER19B LTR ERVK -11 891 801 1 1176 1916 262 35 31 chr17 77578444 77578956 -17693695 + RLTR17 LTR ERVK 105 618 -74 1 1176 1159 220 65 108 chr17 77578993 77579453 -17693198 - RMER19B LTR ERVK -229 673 308 1 1176 439 95 7 0 chr17 77579541 77579615 -17693036 - L1_Mus1 LINE L1 -519 6063 5981 1 1176 4027 55 10 8 chr17 77579615 77580132 -17692519 + L1_Mus1 LINE L1 6050 6567 0 1 1176 965 280 16 12 chr17 77583062 77583304 -17689347 + MTEa LTR MaLR 123 365 -14 1 1176 270 0 0 0 chr17 77583988 77584018 -17688633 + (A)n Simple_repeat Simple_repeat 1 30 0 1 1176 361 255 51 0 chr17 77584148 77584246 -17688405 + Lx9 LINE L1 6948 7050 -594 1 1176 1029 144 0 0 chr17 77584292 77584466 -17688185 + (TCC)n Simple_repeat Simple_repeat 2 175 0 1 1176 721 320 26 29 chr17 77584922 77585231 -17687420 + Lx9 LINE L1 7083 7390 -254 1 1176 586 87 0 28 chr17 77585342 77585449 -17687202 - L1Md_F2 LINE L1 0 6582 6479 1 1176 14226 127 37 41 chr17 77585450 77588528 -17684123 - L1Md_F LINE L1 -2628 3255 217 1 1176 269 188 0 28 chr17 77588728 77588799 -17683852 + (TATATG)n Simple_repeat Simple_repeat 3 71 0 1 1176 364 230 131 80 chr17 77588808 77588864 -17683787 + HAL1-3A_ME LINE L1 1973 2028 -830 1 1176 411 21 0 0 chr17 77588864 77588912 -17683739 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1176 364 230 131 80 chr17 77588912 77589030 -17683621 + HAL1-3A_ME LINE L1 2029 2156 -702 1 1176 26 0 0 0 chr17 77589040 77589066 -17683585 + AT_rich Low_complexity Low_complexity 1 26 0 1 1176 311 316 52 22 chr17 77589433 77589569 -17683082 - L2 LINE L2 -967 2452 2313 1 1176 315 279 66 19 chr17 77590029 77590135 -17682516 - MLT1A LTR MaLR 0 374 264 1 1176 3496 145 20 13 chr17 77590654 77591261 -17681390 - Lx3_Mus LINE L1 0 7009 6399 1 1176 24 85 0 0 chr17 77591400 77591459 -17681192 + AT_rich Low_complexity Low_complexity 1 59 0 1 1176 598 311 18 27 chr17 77591469 77591694 -17680957 - ID_B1 SINE B4 -1 223 1 1 1176 387 56 0 0 chr17 77592793 77592847 -17679804 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1176 180 0 0 0 chr17 77592882 77592902 -17679749 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 1176 358 156 23 30 chr17 77592996 77593128 -17679523 + (TAGA)n Simple_repeat Simple_repeat 2 132 0 1 1176 297 0 0 0 chr17 77593199 77593232 -17679419 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 1176 396 0 0 0 chr17 77593232 77593275 -17679376 + (GA)n Simple_repeat Simple_repeat 2 45 0 1 1176 470 285 111 108 chr17 77593303 77593665 -17678986 - MER31A LTR ERV1 -107 378 16 1 1176 30 69 0 0 chr17 77594158 77594216 -17678435 + AT_rich Low_complexity Low_complexity 1 58 0 1 1177 2370 272 44 19 chr17 77595027 77595710 -17676941 - Lx6 LINE L1 0 7460 6761 1 1177 2935 233 87 13 chr17 77595744 77596626 -17676025 + Lx6 LINE L1 5523 6480 -980 1 1177 4437 79 3 15 chr17 77597664 77598048 -17674603 - L1_Mus1 LINE L1 0 6567 6230 1 1177 6780 45 0 23 chr17 77598048 77598889 -17673762 - RLTR13B2 LTR ERVK 0 822 1 1 1177 4437 79 3 15 chr17 77598889 77599155 -17673496 - L1_Mus1 LINE L1 -338 6229 5964 1 1177 261 154 0 0 chr17 77599157 77599196 -17673455 + MusHAL1 LINE L1 960 998 -1714 1 1177 417 129 0 0 chr17 77599877 77599947 -17672704 + (TG)n Simple_repeat Simple_repeat 2 71 0 1 1177 186 43 0 0 chr17 77600215 77600238 -17672413 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1177 501 62 0 0 chr17 77600491 77600556 -17672095 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 1177 243 0 0 0 chr17 77600556 77600582 -17672069 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1177 529 309 84 65 chr17 77601078 77601434 -17671217 - MLT1A LTR MaLR 0 374 12 1 1177 258 260 220 52 chr17 77601479 77601596 -17671055 - MLT-int LTR MaLR -73 1662 1518 1 1177 375 23 0 0 chr17 77601596 77601640 -17671011 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1177 258 260 220 52 chr17 77601640 77601713 -17670938 - MLT-int LTR MaLR -218 1517 1440 1 1177 269 463 0 26 chr17 77601758 77601911 -17670740 - MLT-int LTR MaLR -432 1303 1155 1 1177 1036 236 83 100 chr17 77601944 77602354 -17670297 + MT2A LTR ERVL 1 540 -61 1 1177 571 13 26 0 chr17 77602355 77602431 -17670220 + (TCTA)n Simple_repeat Simple_repeat 2 79 0 1 1177 5328 20 18 0 chr17 77602459 77603338 -17669313 + L1Md_A LINE L1 5258 6160 -422 1 1177 607 316 15 20 chr17 77603529 77603729 -17668922 - Lx8 LINE L1 -153 7320 7122 1 1177 1280 306 72 17 chr17 77603763 77604222 -17668429 - Lx8 LINE L1 -693 6780 6297 1 1177 1293 226 40 23 chr17 77604274 77604627 -17668024 + RLTR10D LTR ERVK 1 359 0 1 1177 1254 315 78 55 chr17 77604824 77606011 -17666640 - MuRRS4-int LTR ERV1 -1109 3954 2757 1 1177 354 302 79 64 chr17 77606108 77606373 -17666278 - MuRRS4-int LTR ERV1 -5129 2427 2159 1 1177 2555 159 31 20 chr17 77606385 77606874 -17665777 - RMER17A2 LTR ERVK -11 895 402 1 1177 2598 199 40 7 chr17 77606878 77607829 -17664822 - L1_Mur1 LINE L1 -4043 1843 866 1 1177 333 210 24 8 chr17 77608209 77608334 -17664317 - RMER17A LTR ERVK -286 465 339 1 1177 309 349 71 17 chr17 77608363 77608602 -17664049 + L1MD3 LINE L1 6856 7107 -888 1 1177 1110 313 96 39 chr17 77608603 77609175 -17663476 + Lx7 LINE L1 6503 7107 -589 1 1177 255 228 149 0 chr17 77609717 77609831 -17662820 - Lx3C LINE L1 -2 6974 6844 1 1177 495 243 27 0 chr17 77609888 77609999 -17662652 + Lx8 LINE L1 6673 6786 -687 1 1177 474 18 0 0 chr17 77610001 77610056 -17662595 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 1177 389 54 18 0 chr17 77610056 77610111 -17662540 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1177 1023 171 69 0 chr17 77610144 77610319 -17662332 + RLTR14 LTR ERV1 3 189 -193 1 1177 1766 232 81 70 chr17 77610351 77611010 -17661641 - RMER19B LTR ERVK -74 828 1 1 1177 1379 131 0 22 chr17 77611051 77611277 -17661374 + Lx3C LINE L1 6378 6598 -378 1 1177 21 0 0 0 chr17 77612067 77612088 -17660563 + AT_rich Low_complexity Low_complexity 1 21 0 1 1177 312 312 0 0 chr17 77612703 77612783 -17659868 + ID4 SINE ID 2 81 -2 1 1177 21 0 0 0 chr17 77612785 77612806 -17659845 + AT_rich Low_complexity Low_complexity 1 21 0 1 1177 231 250 0 0 chr17 77612945 77613029 -17659622 + (CA)n Simple_repeat Simple_repeat 1 84 0 1 1177 251 231 123 0 chr17 77613114 77613179 -17659472 + Lx7 LINE L1 6303 6375 -1321 1 1177 18981 162 18 2 chr17 77613198 77617608 -17655043 - L1_Mus3 LINE L1 -3 6635 2153 1 1177 563 40 14 0 chr17 77617833 77617907 -17654744 + (TCTA)n Simple_repeat Simple_repeat 2 76 0 1 1177 291 71 0 0 chr17 77617907 77617948 -17654703 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1177 701 310 186 6 chr17 77618211 77618561 -17654090 + RMER15 LTR ERVL 64 476 -99 1 1177 26 0 0 0 chr17 77618731 77618757 -17653894 + AT_rich Low_complexity Low_complexity 1 26 0 1 1177 21 36 0 0 chr17 77619538 77619566 -17653085 + AT_rich Low_complexity Low_complexity 1 28 0 1 1177 8026 37 2 4 chr17 77622693 77624106 -17648545 - L1Md_F2 LINE L1 -3 6579 5170 1 1177 225 0 0 0 chr17 77624115 77624140 -17648511 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1177 1393 245 75 36 chr17 77624253 77624638 -17648013 - MTC LTR MaLR -21 400 1 1 1177 2300 174 39 16 chr17 77625183 77625667 -17646984 + Lx5 LINE L1 4760 5254 -632 2 1177 216 0 0 0 chr17 77625683 77625707 -17646944 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1177 1407 238 27 75 chr17 77625720 77626134 -17646517 + Lx2B LINE L1 6606 6999 -1 2 1177 318 316 105 48 chr17 77626513 77626722 -17645929 - MER58A DNA MER1_type 0 224 4 2 1177 2934 256 17 17 chr17 77627714 77628403 -17644248 - Lx5 LINE L1 0 7050 6362 2 1177 2765 254 29 18 chr17 77628387 77629265 -17643386 + Lx5 LINE L1 5492 6377 -673 2 1177 375 23 0 0 chr17 77630021 77630065 -17642586 + (TTG)n Simple_repeat Simple_repeat 2 45 0 2 1177 209 215 15 30 chr17 77630343 77630410 -17642241 + (TAAA)n Simple_repeat Simple_repeat 1 66 0 2 1177 1335 230 89 36 chr17 77630629 77630990 -17641661 + ORR1C2 LTR MaLR 1 380 -4 2 1177 516 336 28 0 chr17 77631167 77631310 -17641341 + RSINE1 SINE B4 5 151 -14 2 1177 35395 36 0 0 chr17 77631765 77637417 -17635234 + L1Md_T LINE L1 1 5589 -297 2 1177 8914 7 0 2 chr17 77637417 77638415 -17634236 + L1Md_T LINE L1 5590 6585 0 2 1177 26 74 0 0 chr17 77638495 77638549 -17634102 + AT_rich Low_complexity Low_complexity 1 54 0 2 1177 1130 118 31 0 chr17 77638925 77639120 -17633531 + L1_Mus3 LINE L1 6431 6631 -7 2 1177 195 129 0 0 chr17 77639127 77639158 -17633493 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1177 27 92 0 0 chr17 77640360 77640436 -17632215 + AT_rich Low_complexity Low_complexity 1 76 0 2 1177 675 120 0 0 chr17 77641010 77641118 -17631533 + (TA)n Simple_repeat Simple_repeat 1 108 0 2 1177 211 214 0 0 chr17 77641381 77641423 -17631228 + CT-rich Low_complexity Low_complexity 2 43 0 2 1177 343 344 22 37 chr17 77641434 77641570 -17631081 - B1_Mur1 SINE Alu -8 141 8 2 1177 839 306 13 8 chr17 77641615 77641849 -17630802 - MTEb LTR MaLR -144 235 1 2 1177 180 0 0 0 chr17 77642422 77642442 -17630209 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2 1177 230 333 0 0 chr17 77642448 77642508 -17630143 - ID4 SINE ID 0 83 24 2 1177 198 311 76 22 chr17 77642997 77643089 -17629562 + L2a LINE L2 3328 3424 -2 2 1177 400 303 21 107 chr17 77643461 77643694 -17628957 - B3 SINE B2 -3 213 1 2 1177 247 295 95 0 chr17 77644066 77644171 -17628480 + PB1D7 SINE Alu 6 120 0 2 1177 2264 225 41 109 chr17 77644333 77645196 -17627455 - RMER17B LTR ERVK -174 784 25 2 1177 7065 149 9 21 chr17 77646137 77647401 -17625250 - L1_Mus3 LINE L1 -1460 4423 3175 2 1177 8975 128 17 6 chr17 77647395 77648203 -17624448 + L1_Mus3 LINE L1 4427 5234 -649 2 1177 360 0 0 0 chr17 77648203 77648243 -17624408 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 1177 8975 110 14 39 chr17 77648243 77649668 -17622983 + L1_Mus3 LINE L1 5235 6636 -2 2 1177 347 284 148 32 chr17 77650172 77650361 -17622290 - B3 SINE B2 -4 212 2 2 1177 529 78 51 17 chr17 77651487 77651604 -17621047 + (CAGAGA)n Simple_repeat Simple_repeat 2 122 0 2 1177 2070 325 23 16 chr17 77651902 77652012 -17620639 - RMER1B Other Other -6 1060 953 2 1177 450 0 0 0 chr17 77652012 77652062 -17620589 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1177 2392 277 7 13 chr17 77652062 77652664 -17619987 - RMER1A Other Other -114 952 281 2 1177 628 353 61 53 chr17 77652631 77653008 -17619643 - RMER1A Other Other -587 443 64 2 1177 3367 227 66 30 chr17 77653025 77654681 -17617970 + Lx5 LINE L1 5241 6962 -88 2 1177 31 68 0 0 chr17 77654953 77655012 -17617639 + AT_rich Low_complexity Low_complexity 1 59 0 2 1177 354 23 0 0 chr17 77655567 77655610 -17617041 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 1177 225 0 0 0 chr17 77655610 77655635 -17617016 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 1177 758 114 0 0 chr17 77655638 77655743 -17616908 - B1_Mus2 SINE Alu -12 135 31 2 1177 620 253 256 20 chr17 77655886 77656241 -17616410 - RMER20B LTR ERVK -43 584 146 2 1177 723 81 0 0 chr17 77657580 77657679 -17614972 + (TG)n Simple_repeat Simple_repeat 2 100 0 2 1177 1323 266 23 35 chr17 77657684 77658027 -17614624 - MT2A LTR ERVL -109 424 86 2 1177 502 279 0 37 chr17 77658016 77658150 -17614501 - MT2A LTR ERVL -404 129 1 2 1177 1032 345 24 12 chr17 77658318 77658732 -17613919 + Lx8 LINE L1 6419 6837 -636 2 1177 28 29 0 0 chr17 77658749 77658784 -17613867 + AT_rich Low_complexity Low_complexity 1 35 0 2 1177 7536 181 42 13 chr17 77658790 77658860 -17613791 - Lx4A LINE L1 -6 7052 6982 2 1177 1329 73 0 0 chr17 77658860 77659038 -17613613 + (TCTCC)n Simple_repeat Simple_repeat 3 180 0 2 1177 8875 180 29 9 chr17 77659038 77661824 -17610827 - Lx4A LINE L1 -77 6981 4124 2 1177 859 236 54 75 chr17 77661828 77662107 -17610544 + RLTR20B3 LTR ERVK 21 293 -284 2 1177 5198 186 50 5 chr17 77662152 77663263 -17609388 + MYSERV16_I-int LTR ERVK 1167 2326 0 2 1177 1760 247 31 65 chr17 77663268 77663824 -17608827 + RLTR20B3 LTR ERVK 22 525 -3 2 1177 1023 116 12 0 chr17 77663824 77663988 -17608663 - L1_Mur2 LINE L1 -1748 4129 3964 2 1177 5968 143 30 12 chr17 77663984 77665133 -17607518 - L1_Mur2 LINE L1 -2283 3594 2425 2 1177 1889 201 51 3 chr17 77665134 77665699 -17606952 - L1_Mur2 LINE L1 -6292 794 375 2 1177 506 365 37 35 chr17 77665716 77666150 -17606501 + Lx8 LINE L1 6883 7317 -156 2 1177 779 269 59 51 chr17 77666892 77667248 -17605403 + RLTR10D LTR ERVK 1 359 0 2 1177 22 80 0 0 chr17 77668030 77668080 -17604571 + AT_rich Low_complexity Low_complexity 1 50 0 2 1177 23 0 0 0 chr17 77668452 77668475 -17604176 + AT_rich Low_complexity Low_complexity 1 23 0 2 1177 1038 312 103 64 chr17 77669899 77670107 -17602544 + Lx8 LINE L1 6403 6622 -851 2 1177 1137 75 0 0 chr17 77670107 77670254 -17602397 - B1_Mus1 SINE Alu 0 148 2 2 1177 1038 312 103 64 chr17 77670254 77670542 -17602109 + Lx8 LINE L1 6623 6918 -555 2 1177 1239 307 2 60 chr17 77670559 77671006 -17601645 - Lx5 LINE L1 0 7050 6630 2 1177 697 333 103 28 chr17 77671139 77671200 -17601451 + Lx8 LINE L1 6932 6998 -475 2 1177 194 0 0 37 chr17 77671200 77671227 -17601424 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 1177 697 333 103 28 chr17 77671227 77671257 -17601394 + Lx8 LINE L1 6999 7023 -450 2 1177 1472 68 5 0 chr17 77671257 77671448 -17601203 + B2_Mm1t SINE B2 1 192 -1 2 1177 697 333 103 28 chr17 77671448 77671852 -17600799 + Lx8 LINE L1 7024 7465 -8 2 1177 433 252 98 0 chr17 77673615 77673738 -17598913 - B1_Mur2 SINE Alu -9 140 6 2 1177 420 309 141 50 chr17 77675452 77675947 -17596704 + L1M4b LINE L1 1019 1558 -5776 2 1177 35 83 0 0 chr17 77675979 77676063 -17596588 + AT_rich Low_complexity Low_complexity 1 84 0 2 1177 406 258 23 99 chr17 77676063 77676235 -17596416 + L1M4b LINE L1 1580 1738 -5596 2 1177 303 299 6 11 chr17 77676435 77676611 -17596040 + (TCTA)n Simple_repeat Simple_repeat 4 178 0 2 1177 329 208 0 0 chr17 77676536 77676613 -17596038 + (TA)n Simple_repeat Simple_repeat 2 78 0 2 1177 616 142 75 0 chr17 77676873 77677007 -17595644 + L1_Mur2 LINE L1 151 294 -6418 2 1177 449 117 0 25 chr17 77677119 77677198 -17595453 + (CATATA)n Simple_repeat Simple_repeat 2 78 0 2 1177 11505 67 1 0 chr17 77678598 77680096 -17592555 + L1_Mm LINE L1 4073 5571 -312 2 1177 3364 215 89 7 chr17 77680096 77680112 -17592539 + RMER13A LTR ERVK 5 19 -841 2 1177 8129 44 1 0 chr17 77680112 77681098 -17591553 + L1Md_F2 LINE L1 5588 6574 -8 2 1177 3364 215 89 7 chr17 77681098 77681836 -17590815 + RMER13A LTR ERVK 20 821 -39 2 1177 269 359 0 0 chr17 77681883 77681975 -17590676 + (CA)n Simple_repeat Simple_repeat 1 92 0 2 1177 619 342 60 53 chr17 77682187 77682471 -17590180 - MTE2a LTR MaLR -6 373 88 2 1177 811 218 93 15 chr17 77682471 77682676 -17589975 - Lx5 LINE L1 -8 7042 6822 2 1177 427 125 0 0 chr17 77682677 77682741 -17589910 + RMER19C LTR ERVK 548 611 0 2 1177 4847 169 51 4 chr17 77682744 77683709 -17588942 - L1_Mur2 LINE L1 -1077 4800 3791 2 1177 339 105 0 0 chr17 77684880 77684937 -17587714 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1177 257 159 0 0 chr17 77685050 77685094 -17587557 + Lx2A LINE L1 6679 6722 -286 2 1177 10189 93 5 1 chr17 77685321 77687500 -17585151 + L1_Mus1 LINE L1 4381 6567 0 2 1177 22 0 0 0 chr17 77687755 77687777 -17584874 + AT_rich Low_complexity Low_complexity 1 22 0 2 1177 659 306 131 44 chr17 77687831 77688306 -17584345 + Lx8 LINE L1 6950 7465 -8 2 1177 332 275 30 0 chr17 77689166 77689275 -17583376 - Lx6 LINE L1 -602 6858 6777 2 1177 484 304 22 50 chr17 77689389 77689569 -17583082 + Lx6 LINE L1 7072 7246 -214 2 1177 612 0 0 0 chr17 77690523 77690591 -17582060 + (TC)n Simple_repeat Simple_repeat 1 68 0 2 1177 292 331 82 15 chr17 77691552 77691687 -17580964 + MIR3 SINE MIR 38 181 -27 2 1177 1315 142 44 8 chr17 77694899 77695148 -17577503 - Lx2 LINE L1 -14 6983 6726 2 1177 593 100 11 0 chr17 77695149 77695239 -17577412 + Lx LINE L1 6281 6371 -283 2 1177 1182 193 14 0 chr17 77695241 77695464 -17577187 + URR1A DNA MER1_type 1 226 0 2 1177 331 348 102 53 chr17 77695474 77695738 -17576913 - L1MEb LINE L1 -5472 598 322 2 1177 21 36 0 0 chr17 77695750 77695778 -17576873 + AT_rich Low_complexity Low_complexity 1 28 0 2 1177 32 57 0 0 chr17 77696115 77696168 -17576483 + AT_rich Low_complexity Low_complexity 1 53 0 2 1177 1659 161 34 45 chr17 77698245 77698658 -17573993 - RLTR10D LTR ERVK 0 411 14 2 1177 195 407 118 7 chr17 77699462 77699598 -17573053 + L2b LINE L2 3224 3374 -1 2 1177 672 234 71 0 chr17 77699893 77700034 -17572617 + B3A SINE B2 3 153 -45 2 1177 360 43 0 0 chr17 77700035 77700081 -17572570 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1177 4827 136 75 80 chr17 77700210 77701232 -17571419 + L1Md_T LINE L1 189 1205 -5411 2 1177 36078 34 0 0 chr17 77701238 77705656 -17566995 + L1Md_T LINE L1 1170 5586 -297 2 1177 8040 54 0 0 chr17 77705656 77706652 -17565999 + L1Md_T LINE L1 5587 6582 0 2 1177 617 119 58 1 chr17 77706703 77706806 -17565845 - Lx3_Mus LINE L1 -1121 5888 5778 2 1177 6593 123 30 7 chr17 77706806 77707859 -17564792 + Lx3_Mus LINE L1 5923 7000 -9 2 1177 249 259 0 47 chr17 77707859 77707872 -17564779 - Lx3_Mus LINE L1 -1696 5777 5767 2 1177 26 0 0 0 chr17 77707873 77707899 -17564752 + AT_rich Low_complexity Low_complexity 1 26 0 2 1177 225 0 0 0 chr17 77708023 77708048 -17564603 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1177 649 270 50 50 chr17 77708302 77708645 -17564006 + RLTR15 LTR ERVK 1 343 -16 2 1177 270 0 0 0 chr17 77709786 77709816 -17562835 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 2 1177 2436 290 99 49 chr17 77709932 77711199 -17561452 + MYSERV-int LTR ERVK 3813 5143 -1407 2 1177 541 312 15 35 chr17 77711204 77711403 -17561248 + RMER4A LTR ERVK 260 454 -12 2 1177 4655 189 37 68 chr17 77711403 77711543 -17561108 + MYSERV6-int LTR ERVK 7780 7926 -1033 2 1177 483 33 0 0 chr17 77711543 77711604 -17561047 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 2 1177 4655 189 37 68 chr17 77711604 77712679 -17559972 + MYSERV6-int LTR ERVK 7927 8957 -2 2 1177 745 236 89 59 chr17 77712681 77713019 -17559632 + RLTR15 LTR ERVK 1 348 -11 2 1177 1241 97 49 39 chr17 77713180 77713385 -17559266 + L1Md_F2 LINE L1 6364 6570 -12 2 1177 180 253 83 52 chr17 77713441 77713537 -17559114 + L3 LINE CR1 123 221 -4268 2 1177 8113 140 50 1 chr17 77713939 77715329 -17557322 - Lx2 LINE L1 0 6997 5540 2 1177 437 182 28 75 chr17 77715326 77715433 -17557218 + L1_Mm LINE L1 4848 4949 -934 3 1177 657 182 8 0 chr17 77716533 77716665 -17555986 - Lx2 LINE L1 -13 6984 6852 3 1177 720 132 66 52 chr17 77716665 77716801 -17555850 + RMER17B LTR ERVK 1 138 -820 3 1177 444 160 182 8 chr17 77716849 77716975 -17555676 - Lx2 LINE L1 -477 5400 5253 2 1177 10861 161 10 29 chr17 77716974 77718295 -17554356 + L1_Mur2 LINE L1 2795 4067 -1810 3 1177 2971 120 7 5 chr17 77718295 77718729 -17553922 - RLTR10C LTR ERVK -1 435 1 3 1177 10861 161 10 29 chr17 77718729 77719579 -17553072 + L1_Mur2 LINE L1 4068 4924 -953 3 1177 324 89 14 43 chr17 77719582 77719652 -17552999 - Lx LINE L1 -2 6652 6585 3 1177 3911 134 25 37 chr17 77719654 77720304 -17552347 - Lx LINE L1 -178 6476 5835 3 1177 3060 157 235 4 chr17 77720303 77720988 -17551663 + L1_Mm LINE L1 4450 5292 -591 3 1177 31 58 0 0 chr17 77721257 77721309 -17551342 + AT_rich Low_complexity Low_complexity 1 52 0 3 1177 1060 80 15 0 chr17 77722367 77722504 -17550147 + B1_Mus1 SINE Alu 1 139 -9 3 1177 314 23 0 23 chr17 77722504 77722548 -17550103 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 1177 297 294 92 63 chr17 77724601 77724775 -17547876 - MLT1C LTR MaLR -205 262 84 3 1177 33 56 0 0 chr17 77724800 77724854 -17547797 + AT_rich Low_complexity Low_complexity 1 54 0 3 1178 524 91 0 29 chr17 77727187 77727289 -17545362 + (T)n Simple_repeat Simple_repeat 1 99 0 3 1178 183 351 27 0 chr17 77727964 77728038 -17544613 + L2 LINE L2 1337 1412 -2007 3 1178 22 0 0 0 chr17 77730761 77730783 -17541868 + AT_rich Low_complexity Low_complexity 1 22 0 3 1178 459 0 0 0 chr17 77731560 77731611 -17541040 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1178 1757 159 23 0 chr17 77732246 77732548 -17540103 - Lx2 LINE L1 -478 6519 6211 3 1178 308 323 71 24 chr17 77732548 77732675 -17539976 + B3A SINE B2 60 192 -6 3 1178 1229 290 51 8 chr17 77733576 77733951 -17538700 + MTD LTR MaLR 29 419 0 3 1178 986 322 39 24 chr17 77734331 77734713 -17537938 + Lx8 LINE L1 6262 6649 -824 3 1178 293 386 12 29 chr17 77734727 77734898 -17537753 + Lx8 LINE L1 7144 7311 -162 3 1178 229 369 70 49 chr17 77735994 77736279 -17536372 + MLT1D LTR MaLR 39 329 -176 3 1178 529 288 85 34 chr17 77736410 77736586 -17536065 + ORR1D1 LTR MaLR 6 190 -184 3 1178 366 277 11 38 chr17 77736592 77736670 -17535981 + polypyrimidine Low_complexity Low_complexity 102 180 0 3 1178 491 74 12 0 chr17 77736670 77736751 -17535900 + (TG)n Simple_repeat Simple_repeat 2 83 0 3 1178 366 277 11 38 chr17 77736751 77736856 -17535795 + polypyrimidine Low_complexity Low_complexity 2 101 0 3 1178 633 266 61 42 chr17 77736866 77737078 -17535573 + ORR1D1 LTR MaLR 148 363 -11 3 1178 633 300 29 12 chr17 77738002 77738174 -17534477 + B3A SINE B2 6 180 -18 3 1178 245 317 8 48 chr17 77738508 77738634 -17534017 - Lx5 LINE L1 -175 6875 6755 3 1178 725 110 8 0 chr17 77739723 77739841 -17532810 + (TCTA)n Simple_repeat Simple_repeat 4 122 0 3 1178 1175 220 84 17 chr17 77739946 77740242 -17532409 - Lx5 LINE L1 -3 7047 6732 3 1178 1321 162 30 8 chr17 77740250 77740518 -17532133 - Lx5 LINE L1 -1034 6016 5743 3 1178 180 167 0 0 chr17 77740594 77740642 -17532009 + A-rich Low_complexity Low_complexity 1 48 0 3 1178 240 111 12 212 chr17 77740650 77740730 -17531921 + RLTR25A LTR ERVK 757 820 -208 3 1178 297 68 0 0 chr17 77740757 77740801 -17531850 + (T)n Simple_repeat Simple_repeat 1 44 0 3 1178 615 200 19 70 chr17 77740832 77740988 -17531663 + RLTR25A LTR ERVK 954 1101 -2 3 1178 1727 144 22 19 chr17 77740990 77741301 -17531350 - Lx5 LINE L1 -720 5157 4846 3 1178 2859 216 6 16 chr17 77741575 77742242 -17530409 - L1_Mur2 LINE L1 -3651 2226 1567 3 1178 2820 93 25 106 chr17 77742403 77742920 -17529731 + L1Md_F2 LINE L1 6093 6567 -15 3 1178 796 352 25 28 chr17 77743288 77743720 -17528931 - Lx9 LINE L1 -484 7160 6730 3 1178 22 70 0 0 chr17 77743829 77743872 -17528779 + AT_rich Low_complexity Low_complexity 1 43 0 3 1178 212 143 18 0 chr17 77743878 77743934 -17528717 + T-rich Low_complexity Low_complexity 2 58 0 3 1178 4835 40 0 0 chr17 77744020 77744599 -17528052 - L1Md_A LINE L1 -2 6580 6002 3 1178 295 210 47 58 chr17 77744839 77744925 -17527726 - L1M3 LINE L1 -2055 4085 4001 3 1178 24 32 0 0 chr17 77745178 77745209 -17527442 + AT_rich Low_complexity Low_complexity 1 31 0 3 1178 3392 82 4 2 chr17 77745746 77746224 -17526427 - L1_Mm LINE L1 -1637 4246 3768 3 1178 1910 64 7 53 chr17 77746225 77746506 -17526145 + L1_Mus2 LINE L1 6299 6566 0 3 1178 3744 73 2 4 chr17 77746613 77747106 -17525545 - L1Md_F2 LINE L1 -3 6579 6088 3 1178 189 0 0 0 chr17 77747106 77747127 -17525524 + (TTAGGG)n Simple_repeat Simple_repeat 2 22 0 3 1178 321 26 0 0 chr17 77747347 77747385 -17525266 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1178 360 347 47 5 chr17 77747390 77747604 -17525047 - Lx9 LINE L1 -145 7499 7277 3 1178 308 316 107 58 chr17 77747626 77747868 -17524783 - MLT2B4 LTR ERVL -68 488 235 3 1178 580 132 9 9 chr17 77749020 77749127 -17523524 - RMER17B LTR ERVK -495 463 357 3 1178 24 0 0 0 chr17 77749773 77749797 -17522854 + AT_rich Low_complexity Low_complexity 1 24 0 3 1178 3375 198 22 5 chr17 77749996 77750662 -17521989 + RLTR33 LTR ERVK 1 678 0 3 1178 622 125 16 8 chr17 77751004 77751125 -17521526 + (TTCC)n Simple_repeat Simple_repeat 1 122 0 3 1178 1386 131 39 0 chr17 77751683 77751912 -17520739 + L1_Mus3 LINE L1 6400 6637 -1 3 1178 447 87 0 0 chr17 77752000 77752069 -17520582 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 1178 23 0 0 0 chr17 77752280 77752303 -17520348 + AT_rich Low_complexity Low_complexity 1 23 0 3 1178 28 0 0 0 chr17 77753238 77753266 -17519385 + AT_rich Low_complexity Low_complexity 1 28 0 3 1178 360 375 19 56 chr17 77753394 77753555 -17519096 - RSINE1 SINE B4 0 165 11 3 1178 1023 255 32 23 chr17 77753652 77753961 -17518690 + Lx7 LINE L1 7101 7412 -284 3 1178 231 146 0 59 chr17 77753992 77754043 -17518608 + T-rich Low_complexity Low_complexity 2 49 0 3 1178 1252 212 37 105 chr17 77754721 77755074 -17517577 + ORR1A4 LTR MaLR 1 329 0 3 1178 7231 184 26 75 chr17 77755074 77756714 -17515937 + ORR1A4-int LTR MaLR 3 1561 -402 3 1178 1839 249 98 16 chr17 77756726 77757236 -17515415 - RLTR12A LTR ERVK -16 552 1 3 1178 2132 193 23 80 chr17 77757246 77757759 -17514892 + ORR1B1-int LTR MaLR 1026 1509 0 3 1178 1621 205 29 77 chr17 77757759 77758140 -17514511 + ORR1B1 LTR MaLR 1 394 0 3 1178 3283 169 51 14 chr17 77758402 77759126 -17513525 - RMER17A LTR ERVK 0 751 1 3 1178 376 214 0 0 chr17 77759928 77760012 -17512639 + Lx6 LINE L1 7362 7445 -15 3 1178 420 20 0 0 chr17 77760014 77760063 -17512588 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 3 1178 1149 232 9 9 chr17 77760108 77760338 -17512313 - MTC LTR MaLR -156 265 36 3 1178 205 191 0 0 chr17 77761583 77761625 -17511026 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 3 1178 299 308 163 34 chr17 77762858 77763036 -17509615 - L2 LINE L2 -1965 1454 1254 3 1178 37 39 0 0 chr17 77763687 77763738 -17508913 + AT_rich Low_complexity Low_complexity 1 51 0 3 1178 388 274 8 61 chr17 77764205 77764337 -17508314 + Lx6 LINE L1 7288 7412 -48 3 1178 186 71 0 0 chr17 77764531 77764559 -17508092 + (TTG)n Simple_repeat Simple_repeat 3 30 0 3 1178 360 0 0 0 chr17 77764559 77764599 -17508052 + (ATG)n Simple_repeat Simple_repeat 2 41 0 3 1178 272 311 0 68 chr17 77764869 77765059 -17507592 + (TATATG)n Simple_repeat Simple_repeat 4 180 0 3 1178 419 318 63 29 chr17 77765290 77765465 -17507186 + Tigger7 DNA MER2_type 2311 2491 0 3 1178 6561 143 58 35 chr17 77765929 77767266 -17505385 + Lx4A LINE L1 2621 3988 -1889 3 1178 2727 159 31 31 chr17 77767562 77767616 -17505035 + Lx4A LINE L1 5360 5407 -470 3 1178 1037 102 0 13 chr17 77767616 77767765 -17504886 - B1_Mus1 SINE Alu 0 148 2 3 1178 4581 191 36 39 chr17 77767765 77769158 -17503493 + Lx4A LINE L1 5408 6743 -257 3 1178 458 32 32 0 chr17 77769722 77769785 -17502866 + (TTTA)n Simple_repeat Simple_repeat 2 66 0 3 1178 657 301 10 10 chr17 77769787 77769982 -17502669 - B4A SINE B4 -96 196 2 3 1178 2988 69 13 8 chr17 77770288 77770682 -17501969 + MTA_Mm LTR MaLR 1 396 0 3 1178 751 181 75 0 chr17 77770804 77770964 -17501687 - URR1A DNA MER1_type -25 201 30 3 1178 835 192 81 16 chr17 77771480 77771665 -17500986 - URR1A DNA MER1_type 0 226 30 3 1178 384 59 0 0 chr17 77772031 77772082 -17500569 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 3 1178 467 103 0 0 chr17 77772273 77772341 -17500310 - L1Md_F2 LINE L1 -623 5943 5876 3 1178 4687 71 5 29 chr17 77772341 77772995 -17499656 + L1Md_F2 LINE L1 5933 6570 -12 3 1178 723 264 5 34 chr17 77773137 77773341 -17499310 + Lx6 LINE L1 5849 6046 -1414 3 1178 195 42 0 0 chr17 77773635 77773659 -17498992 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1178 402 154 0 0 chr17 77774051 77774129 -17498522 + A-rich Low_complexity Low_complexity 1 78 0 3 1178 309 214 42 14 chr17 77774486 77774557 -17498094 - HAL1-3A_ME LINE L1 -840 2018 1946 3 1178 3101 77 2 0 chr17 77775434 77775836 -17496815 - L1_Mus1 LINE L1 0 6567 6165 3 1178 2347 231 27 39 chr17 77775836 77776423 -17496228 + Lx4B LINE L1 6475 7054 -4 3 1178 225 388 67 20 chr17 77777536 77777686 -17494965 + L2 LINE L2 2704 2860 -559 3 1178 1086 107 0 0 chr17 77778338 77778515 -17494136 + (TG)n Simple_repeat Simple_repeat 2 178 0 3 1178 351 289 98 90 chr17 77778683 77778938 -17493713 - RMER2 LTR ERV1 -27 540 284 3 1178 234 233 0 0 chr17 77779693 77779753 -17492898 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 1178 215 350 115 43 chr17 77780311 77780520 -17492131 - MIR SINE MIR -9 253 30 3 1178 986 206 29 92 chr17 77780619 77780934 -17491717 + Lx7 LINE L1 7398 7692 -4 3 1178 1128 178 27 9 chr17 77781020 77781241 -17491410 - URR1B DNA MER1_type 0 225 1 3 1178 24 32 0 0 chr17 77781658 77781689 -17490962 + AT_rich Low_complexity Low_complexity 1 31 0 3 1178 27 0 0 0 chr17 77783080 77783107 -17489544 + AT_rich Low_complexity Low_complexity 1 27 0 3 1178 483 354 66 49 chr17 77783983 77784227 -17488424 - B4A SINE B4 -44 248 1 3 1178 4205 145 23 82 chr17 77784587 77785370 -17487281 + RMER19A LTR ERVK 1 737 0 3 1178 1246 223 28 5 chr17 77785762 77786099 -17486552 - Lx4B LINE L1 -145 6855 6490 3 1178 1769 276 20 38 chr17 77786093 77786647 -17486004 + Lx4B LINE L1 5954 6497 -561 3 1178 486 289 165 33 chr17 77786973 77787306 -17485345 - MTEa LTR MaLR 0 379 3 4 1178 302 259 91 10 chr17 77788234 77788384 -17484267 + L1MD3 LINE L1 6865 7045 -950 4 1178 480 292 45 3 chr17 77788461 77788616 -17484035 + Lx9 LINE L1 6230 6516 -1128 4 1178 245 352 18 66 chr17 77788615 77788782 -17483869 - Lx9 LINE L1 -493 7151 6993 4 1178 254 316 10 0 chr17 77789056 77789154 -17483497 - Lx7 LINE L1 -19 7677 7579 4 1178 630 329 16 59 chr17 77789319 77789626 -17483025 + Lx9 LINE L1 6996 7289 -355 4 1178 384 22 0 0 chr17 77791042 77791087 -17481564 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 1178 23 0 0 0 chr17 77791169 77791192 -17481459 + AT_rich Low_complexity Low_complexity 1 23 0 4 1178 23 0 0 0 chr17 77791235 77791258 -17481393 + AT_rich Low_complexity Low_complexity 1 23 0 4 1178 245 29 29 0 chr17 77791766 77791800 -17480851 + (TC)n Simple_repeat Simple_repeat 2 36 0 4 1178 312 252 41 0 chr17 77792037 77792160 -17480491 + L1_Rod LINE L1 2583 2710 -3137 4 1178 3904 49 4 0 chr17 77794835 77795324 -17477327 - L1Md_F3 LINE L1 -14 6570 6080 4 1178 26 30 0 0 chr17 77797199 77797232 -17475419 + AT_rich Low_complexity Low_complexity 1 33 0 4 1178 513 160 0 0 chr17 77797451 77797557 -17475094 + (TG)n Simple_repeat Simple_repeat 2 107 0 4 1178 671 280 9 14 chr17 77797584 77797794 -17474857 + B3 SINE B2 2 210 -6 4 1178 26 64 0 0 chr17 77798210 77798257 -17474394 + AT_rich Low_complexity Low_complexity 1 47 0 4 1178 21 71 0 0 chr17 77798329 77798371 -17474280 + AT_rich Low_complexity Low_complexity 1 42 0 4 1178 410 286 23 16 chr17 77798466 77798594 -17474057 - B3 SINE B2 0 216 88 4 1178 315 0 0 0 chr17 77799154 77799189 -17473462 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1178 522 0 0 0 chr17 77799540 77799598 -17473053 + (TA)n Simple_repeat Simple_repeat 1 58 0 4 1178 7970 48 10 3 chr17 77799599 77800661 -17471990 - L1Md_F2 LINE L1 -16 6566 5498 4 1178 2775 124 36 8 chr17 77800803 77801273 -17471378 - RLTR44D LTR ERVK -3 483 1 4 1178 461 317 75 54 chr17 77803098 77803467 -17469184 + Lx7 LINE L1 6773 7160 -313 4 1178 426 360 85 46 chr17 77803734 77804381 -17468270 - L1M5 LINE L1 -2419 3727 3056 4 1178 241 212 14 83 chr17 77805881 77805953 -17466698 + B4A SINE B4 2 68 -224 4 1178 533 194 236 0 chr17 77806002 77806146 -17466505 + URR1A DNA MER1_type 49 226 0 4 1178 309 214 157 48 chr17 77806017 77806164 -17466487 - CYRA11_Mm Unknown Y-chromosome -300 317 155 4 1178 1330 258 82 40 chr17 77806850 77807274 -17465377 + RLTR20B3 LTR ERVK 93 534 -43 4 1178 5677 130 16 21 chr17 77807287 77808306 -17464345 + L1_Mur2 LINE L1 2640 3653 -2224 4 1178 334 219 0 0 chr17 77808319 77808383 -17464268 + Lx7 LINE L1 6341 6404 -1292 4 1178 380 250 41 82 chr17 77808431 77808627 -17464024 + Lx7 LINE L1 7481 7668 -28 4 1178 243 357 76 38 chr17 77809295 77809426 -17463225 + MER20 DNA MER1_type 17 152 -67 4 1178 456 51 0 0 chr17 77809600 77809659 -17462992 + (TC)n Simple_repeat Simple_repeat 2 60 0 4 1178 396 233 0 0 chr17 77809919 77810039 -17462612 + (TA)n Simple_repeat Simple_repeat 2 121 0 4 1178 277 237 0 31 chr17 77810983 77811066 -17461585 + T-rich Low_complexity Low_complexity 11 93 0 4 1178 1131 81 0 0 chr17 77811066 77811214 -17461437 - B1_Mus1 SINE Alu 0 148 1 4 1178 277 237 0 31 chr17 77811214 77811226 -17461425 + T-rich Low_complexity Low_complexity 1 10 0 4 1178 335 359 8 8 chr17 77811739 77811861 -17460790 + MLT1A0 LTR MaLR 8 129 -236 4 1178 1050 220 38 87 chr17 77811861 77812150 -17460501 + ORR1D1 LTR MaLR 1 275 -99 4 1178 2151 171 6 116 chr17 77812152 77812377 -17460274 + RMER6B LTR ERVK 1 213 -248 4 1178 954 100 42 14 chr17 77812377 77812519 -17460132 + B1_Mus2 SINE Alu 1 146 -1 4 1178 2151 171 6 116 chr17 77812519 77812809 -17459842 + RMER6B LTR ERVK 214 459 -2 4 1178 1342 275 107 31 chr17 77812947 77813223 -17459428 + ORR1D1-int LTR MaLR 1 378 -992 4 1178 279 79 0 0 chr17 77813223 77813261 -17459390 + (CAT)n Simple_repeat Simple_repeat 2 39 0 4 1178 1342 278 94 58 chr17 77813261 77813674 -17458977 + ORR1D1-int LTR MaLR 379 785 -585 4 1178 9710 159 19 30 chr17 77813705 77813982 -17458669 + RLTR22_Mur LTR ERVK 1 270 -1578 4 1178 1163 57 0 0 chr17 77813982 77814123 -17458528 - B1_Mus1 SINE Alu -5 143 3 4 1178 9710 159 19 30 chr17 77814123 77815687 -17456964 + RLTR22_Mur LTR ERVK 271 1822 -26 4 1178 1886 256 83 26 chr17 77815662 77815812 -17456839 + ORR1D1-int LTR MaLR 799 951 -419 4 1178 1816 214 165 28 chr17 77815812 77816419 -17456232 + RMER6C LTR ERVK 1 690 0 4 1178 1886 256 83 26 chr17 77816419 77816809 -17455842 + ORR1D1-int LTR MaLR 952 1370 0 4 1178 720 292 62 52 chr17 77816811 77816980 -17455671 + ORR1D1 LTR MaLR 3 165 -209 4 1178 507 60 0 0 chr17 77816980 77817047 -17455604 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 4 1178 720 292 62 52 chr17 77817047 77817245 -17455406 + ORR1D1 LTR MaLR 166 374 0 4 1178 2302 213 94 37 chr17 77817686 77818359 -17454292 + Lx LINE L1 5587 6297 -357 4 1178 652 164 43 0 chr17 77818357 77818473 -17454178 + Lx2 LINE L1 6775 6895 -102 4 1178 2152 262 95 52 chr17 77818473 77819255 -17453396 + RMER17B LTR ERVK 1 815 -143 4 1178 350 331 24 45 chr17 77819272 77819454 -17453197 + RMER13B LTR ERVK 684 874 -34 4 1178 492 161 44 18 chr17 77819464 77819578 -17453073 + Lx LINE L1 6538 6654 0 4 1178 503 31 15 0 chr17 77819602 77819667 -17452984 + (TA)n Simple_repeat Simple_repeat 2 67 0 4 1178 483 274 0 0 chr17 77819689 77819784 -17452867 - B3A SINE B2 -77 121 27 4 1178 943 311 53 46 chr17 77819965 77820420 -17452231 + Lx8 LINE L1 7000 7457 -16 4 1178 997 78 0 84 chr17 77821320 77821474 -17451177 + B1_Mm SINE Alu 2 142 -5 4 1178 219 36 0 0 chr17 77821476 77821504 -17451147 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 4 1178 217 160 19 39 chr17 77821608 77821660 -17450991 + (TTG)n Simple_repeat Simple_repeat 3 53 0 4 1178 224 333 14 0 chr17 77821824 77821896 -17450755 - ID SINE ID -146 78 6 4 1178 241 161 69 0 chr17 77821942 77822070 -17450581 + (TA)n Simple_repeat Simple_repeat 1 136 0 4 1178 1155 166 19 0 chr17 77822188 77822393 -17450258 + Lx4B LINE L1 5725 5933 -1125 4 1178 211 276 52 13 chr17 77823039 77823116 -17449535 + ID2 SINE ID 3 82 -1 4 1178 23 33 0 0 chr17 77823433 77823463 -17449188 + AT_rich Low_complexity Low_complexity 1 30 0 4 1178 1609 248 42 19 chr17 77823466 77823894 -17448757 + Lx5 LINE L1 5925 6362 -688 4 1178 3369 67 0 0 chr17 77823892 77824339 -17448312 - L1_Mm LINE L1 -1517 4366 3920 4 1178 4614 81 8 10 chr17 77824339 77824964 -17447687 + L1_Mus1 LINE L1 5944 6567 0 4 1178 2895 256 25 7 chr17 77824974 77825662 -17446989 + Lx5 LINE L1 6349 7048 -2 4 1178 363 346 26 82 chr17 77826131 77826326 -17446325 + B3A SINE B2 1 184 -14 4 1178 279 0 0 0 chr17 77827528 77827559 -17445092 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1178 1142 95 0 0 chr17 77827570 77827717 -17444934 + B1_Mus2 SINE Alu 1 147 0 4 1178 276 56 74 0 chr17 77827717 77827771 -17444880 + (CAAA)n Simple_repeat Simple_repeat 3 60 0 4 1178 295 301 8 34 chr17 77827938 77828055 -17444596 + CT-rich Low_complexity Low_complexity 4 117 0 4 1178 269 192 47 20 chr17 77828149 77828222 -17444429 + MTE2b LTR MaLR 281 353 -26 4 1178 848 201 136 0 chr17 77828416 77828615 -17444036 - URR1A DNA MER1_type 0 226 1 4 1178 374 301 48 44 chr17 77829118 77829389 -17443262 + RMER16-int LTR ERVK 4268 4539 -867 4 1178 937 49 44 89 chr17 77829451 77829609 -17443042 + L1Md_F3 LINE L1 6420 6570 -14 4 1178 1086 67 0 0 chr17 77829622 77829757 -17442894 + B1_Mus2 SINE Alu 1 135 -12 4 1178 207 0 0 0 chr17 77829758 77829781 -17442870 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4 1178 4238 80 3 35 chr17 77829792 77830387 -17442264 + L1_Mus2 LINE L1 5990 6565 -1 4 1178 801 194 0 0 chr17 77830398 77830553 -17442098 + Lx LINE L1 4964 5118 -765 4 1178 6756 144 12 5 chr17 77830555 77831790 -17440861 + Lx LINE L1 5409 6654 0 4 1178 246 32 0 0 chr17 77832293 77832324 -17440327 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1178 267 317 0 0 chr17 77833031 77833091 -17439560 + MTC LTR MaLR 27 86 -293 4 1178 562 320 92 47 chr17 77833560 77833898 -17438753 + Lx8 LINE L1 7121 7473 0 4 1178 1470 170 103 40 chr17 77834379 77834759 -17437892 + MTC-int LTR MaLR 855 1258 0 4 1178 588 143 0 0 chr17 77834811 77834909 -17437742 + (TCTCCC)n Simple_repeat Simple_repeat 5 102 0 4 1178 1173 113 0 0 chr17 77834913 77835090 -17437561 + (TTC)n Simple_repeat Simple_repeat 3 179 0 4 1178 1254 249 7 14 chr17 77835091 77835384 -17437267 + MTC LTR MaLR 131 421 0 4 1178 1696 342 70 9 chr17 77835402 77836415 -17436236 + Lx8 LINE L1 6370 7443 -30 4 1178 26 50 0 0 chr17 77836416 77836456 -17436195 + AT_rich Low_complexity Low_complexity 1 40 0 4 1178 25 0 0 0 chr17 77837449 77837474 -17435177 + AT_rich Low_complexity Low_complexity 1 25 0 4 1178 657 300 16 53 chr17 77837491 77837681 -17434970 + B3A SINE B2 9 191 -7 4 1178 613 291 90 26 chr17 77837696 77837964 -17434687 - Lx8 LINE L1 -2 7471 7187 4 1178 300 53 0 0 chr17 77839143 77839181 -17433470 + (GA)n Simple_repeat Simple_repeat 2 39 0 4 1178 657 208 12 6 chr17 77839191 77839360 -17433291 + GA-rich Low_complexity Low_complexity 5 174 0 4 1178 21 0 0 0 chr17 77840377 77840398 -17432253 + AT_rich Low_complexity Low_complexity 1 21 0 4 1178 501 32 0 0 chr17 77840416 77840479 -17432172 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1178 28 29 0 0 chr17 77841996 77842031 -17430620 + AT_rich Low_complexity Low_complexity 1 35 0 4 1178 252 0 0 0 chr17 77842182 77842210 -17430441 + (TC)n Simple_repeat Simple_repeat 2 29 0 4 1178 315 0 0 0 chr17 77842210 77842244 -17430407 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1178 861 316 18 40 chr17 77842244 77842695 -17429956 + Lx6 LINE L1 110 550 -7178 4 1178 890 286 47 16 chr17 77842687 77843074 -17429577 + Lx6 LINE L1 854 1252 -6476 4 1178 670 202 60 0 chr17 77843067 77843235 -17429416 + Lx2B LINE L1 5929 6106 -894 4 1178 8146 181 75 44 chr17 77843235 77843406 -17429245 + ORR1A3-int LTR MaLR 99 266 -1697 4 1178 180 0 0 0 chr17 77843406 77843426 -17429225 + (GTTTG)n Simple_repeat Simple_repeat 3 22 0 4 1178 8146 181 75 44 chr17 77843426 77844278 -17428373 + ORR1A3-int LTR MaLR 267 1164 -799 4 1178 1044 81 0 0 chr17 77844278 77844414 -17428237 + B1_Mus1 SINE Alu 1 136 -12 4 1178 322 20 19 39 chr17 77844415 77844467 -17428184 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 4 1178 8146 181 75 44 chr17 77844467 77845247 -17427404 + ORR1A3-int LTR MaLR 1165 1962 -1 4 1178 1661 180 9 72 chr17 77845248 77845596 -17427055 + ORR1A3 LTR MaLR 1 326 0 4 1178 258 148 95 32 chr17 77845623 77845686 -17426965 - Lx6 LINE L1 -3 7457 7391 5 1178 393 276 92 30 chr17 77845833 77845964 -17426687 - B1F SINE Alu -5 144 6 5 1178 8059 190 40 21 chr17 77846034 77847827 -17424824 + Lx6 LINE L1 3591 5417 -463 4 1178 3314 291 122 7 chr17 77847840 77848997 -17423654 - Lx6 LINE L1 -8 7452 6163 5 1178 4488 225 26 28 chr17 77848989 77850287 -17422364 + Lx6 LINE L1 5406 6702 -758 4 1178 2308 195 28 60 chr17 77850287 77850337 -17422314 - RMER6C LTR ERVK -38 652 602 5 1178 2599 81 0 56 chr17 77850337 77850731 -17421920 - L1_Mus2 LINE L1 0 6566 6195 5 1178 2308 195 28 60 chr17 77850731 77851248 -17421403 - RMER6C LTR ERVK -89 601 103 5 1178 338 155 84 0 chr17 77851258 77851329 -17421322 + Lx6 LINE L1 6719 6795 -665 4 1178 962 283 101 73 chr17 77851329 77851805 -17420846 - RLTR19 LTR ERVK 0 499 11 5 1178 2978 236 39 6 chr17 77851835 77852470 -17420181 + Lx6 LINE L1 6796 7451 -9 4 1178 27 73 0 0 chr17 77852470 77852525 -17420126 + AT_rich Low_complexity Low_complexity 1 55 0 5 1178 40 59 0 0 chr17 77852542 77852610 -17420041 + AT_rich Low_complexity Low_complexity 1 68 0 5 1178 806 0 11 0 chr17 77853283 77853377 -17419274 + (CA)n Simple_repeat Simple_repeat 2 96 0 5 1178 832 276 146 39 chr17 77853442 77854052 -17418599 - L1MA4 LINE L1 -278 6022 5359 5 1178 21 71 0 0 chr17 77855696 77855738 -17416913 + AT_rich Low_complexity Low_complexity 1 42 0 5 1178 232 254 41 27 chr17 77855777 77855850 -17416801 - RLTR16 LTR ERVK -2 503 430 5 1178 1785 215 88 35 chr17 77855853 77855918 -17416733 - RLTR16 LTR ERVK -15 490 413 5 1178 459 0 0 0 chr17 77855918 77855969 -17416682 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1178 1785 215 88 35 chr17 77855969 77856356 -17416295 - RLTR16 LTR ERVK -93 412 15 5 1178 242 387 100 41 chr17 77856384 77856675 -17415976 - LTR16A LTR ERVL -41 410 103 5 1179 21 0 0 0 chr17 77858060 77858081 -17414570 + AT_rich Low_complexity Low_complexity 1 21 0 5 1179 290 359 53 23 chr17 77859232 77859363 -17413288 + ORR1E LTR MaLR 1 135 -224 5 1179 612 38 0 0 chr17 77859415 77859494 -17413157 + (TC)n Simple_repeat Simple_repeat 1 79 0 5 1179 273 29 0 0 chr17 77859494 77859528 -17413123 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1179 400 335 51 95 chr17 77860205 77860712 -17411939 + L1MEf LINE L1 827 1311 -4889 5 1179 523 338 80 15 chr17 77860721 77860946 -17411705 + MLT2B1 LTR ERVL 56 299 -221 5 1179 681 293 19 19 chr17 77861126 77861338 -17411313 - B3 SINE B2 -4 212 1 5 1179 2326 210 127 13 chr17 77861444 77862057 -17410594 + RMER6C LTR ERVK 8 690 0 5 1179 1037 253 44 0 chr17 77862058 77862307 -17410344 - L1_Mur3 LINE L1 -260 5620 5361 5 1179 2969 175 101 12 chr17 77862564 77863504 -17409147 + L1VL4 LINE L1 800 1848 -4038 5 1179 970 181 11 6 chr17 77863499 77863682 -17408969 - L1_Mur3 LINE L1 -1059 4821 4638 5 1179 254 148 143 36 chr17 77863680 77863736 -17408915 + Lx7 LINE L1 5636 5697 -1999 5 1179 7615 43 0 8 chr17 77863737 77864665 -17407986 - L1Md_T LINE L1 -2 6580 5660 5 1179 1124 246 55 44 chr17 77864642 77865025 -17407626 + Lx7 LINE L1 5686 6072 -1624 5 1179 3933 227 80 19 chr17 77865055 77866030 -17406621 + Lx7 LINE L1 6234 7268 -428 5 1179 738 79 148 14 chr17 77866062 77866204 -17406447 + L1_Mus3 LINE L1 6478 6638 0 5 1179 248 211 14 0 chr17 77866331 77866402 -17406249 + CT-rich Low_complexity Low_complexity 2 73 0 5 1179 340 228 48 81 chr17 77866516 77866702 -17405949 + Lx7 LINE L1 7516 7695 -1 5 1179 272 292 103 17 chr17 77866819 77866993 -17405658 + L1M4 LINE L1 4818 5006 -1140 5 1179 490 155 36 0 chr17 77867475 77867559 -17405092 + PB1D9 SINE Alu 29 115 -5 5 1179 261 0 0 0 chr17 77867564 77867593 -17405058 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1179 7058 62 2 9 chr17 77867941 77868860 -17403791 + L1Md_F2 LINE L1 5657 6569 -13 5 1179 672 310 117 19 chr17 77868872 77869181 -17403470 - MLT1A1 LTR MaLR -42 366 28 5 1179 657 244 77 102 chr17 77869640 77869836 -17402815 - B3 SINE B2 -2 193 3 5 1179 446 0 19 0 chr17 77870448 77870502 -17402149 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 5 1179 1135 83 0 0 chr17 77870710 77870854 -17401797 + B1_Mm SINE Alu 3 146 -1 5 1179 1131 171 52 18 chr17 77871210 77871393 -17401258 + ORR1C2 LTR MaLR 1 171 -213 5 1179 522 0 0 0 chr17 77871393 77871451 -17401200 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 1179 1131 186 779 3 chr17 77871451 77871568 -17401083 + ORR1C2 LTR MaLR 172 384 0 5 1179 5294 181 27 11 chr17 77872080 77873115 -17399536 - Lx2B LINE L1 -1 6999 5948 5 1179 7481 164 50 14 chr17 77873117 77874775 -17397876 + Lx2A1 LINE L1 4224 5960 -1048 5 1179 33 103 0 0 chr17 77875259 77875376 -17397275 + AT_rich Low_complexity Low_complexity 1 117 0 5 1179 22 0 0 0 chr17 77876532 77876554 -17396097 + AT_rich Low_complexity Low_complexity 1 22 0 5 1179 24 0 0 0 chr17 77876652 77876676 -17395975 + AT_rich Low_complexity Low_complexity 1 24 0 5 1179 918 102 0 0 chr17 77876908 77877036 -17395615 + B1_Mus1 SINE Alu 16 143 -5 5 1179 195 69 0 0 chr17 77877038 77877067 -17395584 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 1179 5806 79 8 4 chr17 77877070 77877861 -17394790 + L1Md_F2 LINE L1 5783 6576 -6 5 1179 274 255 60 0 chr17 77878635 77878784 -17393867 - RMER17D LTR ERVK -384 505 348 5 1179 798 234 86 16 chr17 77878915 77879102 -17393549 - Lx5 LINE L1 -3 7047 6848 5 1179 273 109 0 0 chr17 77879318 77879364 -17393287 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 5 1179 34 89 0 0 chr17 77879499 77879589 -17393062 + AT_rich Low_complexity Low_complexity 1 90 0 5 1179 452 330 35 27 chr17 77879704 77879943 -17392708 + MTE2b LTR MaLR 1 213 -206 5 1179 334 197 14 0 chr17 77879951 77880022 -17392629 + L1MEf LINE L1 1364 1435 -5198 5 1179 315 261 58 122 chr17 77880121 77880309 -17392342 + L1MEf LINE L1 1384 1559 -5074 5 1179 4142 125 87 9 chr17 77880410 77880891 -17391760 - Lx3_Mus LINE L1 -565 6444 5921 5 1179 362 57 19 0 chr17 77880891 77880944 -17391707 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 5 1179 4142 125 87 9 chr17 77880944 77881155 -17391496 - Lx3_Mus LINE L1 -1089 5920 5700 5 1179 3809 80 2 0 chr17 77881156 77881655 -17390996 + Lx3_Mus LINE L1 6449 6948 -61 5 1179 342 0 0 0 chr17 77881657 77881695 -17390956 + (CTA)n Simple_repeat Simple_repeat 1 38 0 5 1179 225 0 0 0 chr17 77881695 77881720 -17390931 + (TAA)n Simple_repeat Simple_repeat 3 27 0 5 1179 2855 80 8 5 chr17 77881766 77882157 -17390494 + L1Md_F2 LINE L1 6177 6568 -14 5 1179 189 0 0 0 chr17 77882173 77882194 -17390457 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 5 1179 25 31 0 0 chr17 77882448 77882480 -17390171 + AT_rich Low_complexity Low_complexity 1 32 0 5 1179 24 0 0 0 chr17 77882499 77882523 -17390128 + AT_rich Low_complexity Low_complexity 1 24 0 5 1179 216 313 128 27 chr17 77883955 77884107 -17388544 - MIRb SINE MIR -39 223 61 5 1179 1132 299 43 51 chr17 77884367 77884762 -17387889 + Lx8 LINE L1 6218 6609 -864 5 1179 235 310 44 44 chr17 77886011 77886102 -17386549 + B1F SINE Alu 11 101 -48 5 1179 299 289 12 18 chr17 77886772 77886941 -17385710 + (TA)n Simple_repeat Simple_repeat 1 168 0 5 1179 684 24 0 0 chr17 77886949 77887031 -17385620 + (CA)n Simple_repeat Simple_repeat 2 83 0 5 1179 430 364 65 15 chr17 77887163 77887364 -17385287 + B4 SINE B4 22 232 -60 5 1179 360 176 29 0 chr17 77887366 77887468 -17385183 + (TAGA)n Simple_repeat Simple_repeat 2 106 0 5 1179 331 314 67 17 chr17 77887578 77887698 -17384953 + ID_B1 SINE B4 88 213 -11 5 1179 337 319 35 48 chr17 77888233 77888378 -17384273 - B4A SINE B4 -148 144 2 5 1179 477 0 0 0 chr17 77889250 77889303 -17383348 + (CATA)n Simple_repeat Simple_repeat 2 54 0 5 1179 522 133 0 0 chr17 77889310 77889400 -17383251 + (TAGA)n Simple_repeat Simple_repeat 4 93 0 5 1179 7664 62 1 0 chr17 77890108 77891076 -17381575 + L1Md_F2 LINE L1 4618 5586 -297 5 1179 7771 44 23 2 chr17 77891076 77892040 -17380611 + L1Md_F2 LINE L1 5587 6570 -12 5 1179 2469 117 109 0 chr17 77892236 77892631 -17380020 - Lx3A LINE L1 -10 6971 6534 5 1179 258 32 0 0 chr17 77892653 77892684 -17379967 + (TGG)n Simple_repeat Simple_repeat 1 31 0 5 1179 1255 109 104 0 chr17 77892684 77892886 -17379765 - Lx2 LINE L1 -286 6711 6489 5 1179 264 86 0 0 chr17 77892963 77893019 -17379632 - L1_Mus1 LINE L1 -2 6565 6517 5 1179 1717 174 3 6 chr17 77893274 77893587 -17379064 - Lx2 LINE L1 -5 6992 6681 5 1179 359 86 35 0 chr17 77893587 77893645 -17379006 + Lx LINE L1 6085 6144 -510 5 1179 1819 119 27 27 chr17 77893657 77893950 -17378701 + Lx LINE L1 6341 6633 -21 5 1179 10898 170 24 3 chr17 77893951 77894880 -17377771 + L1_Mm LINE L1 3687 4633 -1250 5 1179 576 42 0 0 chr17 77894880 77894951 -17377700 + (GAAA)n Simple_repeat Simple_repeat 3 73 0 5 1179 10898 170 24 3 chr17 77894951 77896054 -17376597 + L1_Mm LINE L1 4634 5760 -123 5 1179 439 279 56 28 chr17 77896487 77896846 -17375805 + L1Md_F LINE L1 406 750 -5810 5 1179 302 148 49 0 chr17 77896869 77896930 -17375721 - L1_Mur2 LINE L1 -1401 4476 4413 5 1179 313 275 71 123 chr17 77897166 77897506 -17375145 - L1MC5 LINE L1 -870 7091 6770 5 1179 497 55 0 14 chr17 77897945 77898019 -17374632 + (CA)n Simple_repeat Simple_repeat 2 74 0 5 1179 351 165 0 0 chr17 77898019 77898104 -17374547 + GA-rich Low_complexity Low_complexity 1 85 0 5 1179 327 297 37 40 chr17 77898105 77898299 -17374352 + Lx7 LINE L1 6193 6377 -1096 5 1179 612 292 93 3 chr17 77898370 77898703 -17373948 + L1_Rod LINE L1 475 837 -6335 5 1179 1485 279 35 18 chr17 77898703 77899104 -17373547 + MTD LTR MaLR 1 408 -11 5 1179 238 233 48 48 chr17 77899166 77899229 -17373422 + Lx7 LINE L1 6717 6779 -917 5 1179 911 280 181 18 chr17 77899248 77899706 -17372945 + Lx7 LINE L1 6721 7253 -443 5 1179 1492 281 102 50 chr17 77899994 77900632 -17372019 - Lx9 LINE L1 -20 7624 6956 5 1179 2699 164 94 87 chr17 77900632 77901239 -17371412 - RMER19C LTR ERVK 0 611 1 5 1179 1492 281 102 50 chr17 77901239 77901495 -17371156 - Lx9 LINE L1 -689 6955 6684 5 1179 22 0 0 0 chr17 77901839 77901861 -17370790 + AT_rich Low_complexity Low_complexity 1 22 0 5 1179 356 359 55 7 chr17 77901960 77902106 -17370545 + RSINE1 SINE B4 8 160 -5 5 1179 309 343 88 24 chr17 77902133 77902303 -17370348 + B3A SINE B2 3 183 -15 5 1179 382 212 0 10 chr17 77902325 77902425 -17370226 + Lx3C LINE L1 6874 6972 -4 5 1179 3392 251 50 48 chr17 77903373 77903707 -17368944 - Lx7 LINE L1 0 7696 7365 5 1179 378 0 0 0 chr17 77903707 77903749 -17368902 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1179 3392 251 50 48 chr17 77903749 77904461 -17368190 - Lx7 LINE L1 -332 7364 6650 5 1179 268 317 108 16 chr17 77904731 77904917 -17367734 + B3 SINE B2 1 203 -13 5 1179 198 240 0 0 chr17 77905579 77905629 -17367022 + L2a LINE L2 3373 3422 -4 5 1179 1945 65 0 15 chr17 77906030 77906297 -17366354 + L1Md_F2 LINE L1 6318 6580 -2 6 1179 270 0 0 0 chr17 77907075 77907105 -17365546 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1179 713 85 142 0 chr17 77907106 77907212 -17365439 + B2_Mm2 SINE B2 9 129 -66 6 1179 2318 185 116 47 chr17 77907645 77908196 -17364455 + L1VL4 LINE L1 195 783 -5519 6 1179 6068 119 24 15 chr17 77908194 77909251 -17363400 + MusHAL1 LINE L1 1 1066 -1646 6 1179 2390 154 3 5 chr17 77909239 77909631 -17363020 + L1_Mm LINE L1 5490 5880 -3 6 1179 1743 217 27 6 chr17 77909634 77910339 -17362312 + MYSERV16_I-int LTR ERVK 1569 2326 0 6 1179 1408 265 24 70 chr17 77910352 77910910 -17361741 + RLTR20A LTR ERVK 13 539 -2 6 1179 3320 104 6 12 chr17 77910978 77911472 -17361179 + L1_Mus3 LINE L1 6148 6638 0 6 1179 773 285 34 15 chr17 77911486 77911810 -17360841 - L1M2 LINE L1 -681 5619 5290 6 1179 1030 99 0 7 chr17 77912071 77912213 -17360438 - B1_Mus2 SINE Alu -5 142 2 6 1179 510 17 0 0 chr17 77912257 77912316 -17360335 + (TC)n Simple_repeat Simple_repeat 2 60 0 6 1179 6364 131 39 8 chr17 77912322 77913375 -17359276 - Lx2 LINE L1 -3 6994 5909 6 1179 2999 137 40 40 chr17 77913403 77913951 -17358700 - Lx LINE L1 -12 6642 6095 6 1179 5309 180 9 8 chr17 77913979 77914709 -17357942 - L1_Mm LINE L1 -9 5874 5148 6 1179 330 26 0 0 chr17 77914709 77914748 -17357903 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6 1179 5309 180 9 8 chr17 77914748 77915004 -17357647 - L1_Mm LINE L1 -736 5147 4888 6 1179 2731 102 3 13 chr17 77915004 77915393 -17357258 + L1_Mus4 LINE L1 5903 6287 -349 6 1179 366 137 10 31 chr17 77915368 77915466 -17357185 + Lx4A LINE L1 3207 3302 -2575 6 1179 11326 151 17 8 chr17 77915457 77918666 -17353985 + Lx4A LINE L1 3533 6951 -107 6 1179 495 0 0 0 chr17 77920007 77920062 -17352589 + (TA)n Simple_repeat Simple_repeat 1 55 0 6 1179 435 38 0 0 chr17 77920904 77920957 -17351694 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1179 486 0 0 0 chr17 77921017 77921071 -17351580 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1179 405 0 0 0 chr17 77921072 77921117 -17351534 + (TA)n Simple_repeat Simple_repeat 1 45 0 6 1179 862 173 6 53 chr17 77921341 77921512 -17351139 + RMER16-int LTR ERVK 1350 1512 -3894 6 1179 307 143 66 228 chr17 77921542 77921678 -17350973 + RLTR41 LTR ERV1 62 175 -271 6 1179 11153 128 158 127 chr17 77921678 77924530 -17348121 + RMER16-int LTR ERVK 1609 4550 -856 6 1179 225 0 0 0 chr17 77925791 77925816 -17346835 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1179 513 0 0 0 chr17 77925816 77925872 -17346779 + (GA)n Simple_repeat Simple_repeat 2 58 0 6 1179 11086 141 19 6 chr17 77925885 77928704 -17343947 - L1_Mus4 LINE L1 -2 6634 3774 6 1179 5645 99 24 10 chr17 77928707 77929614 -17343037 - MusHAL1 LINE L1 -1637 1075 156 6 1179 3092 204 11 2 chr17 77929618 77930232 -17342419 - L1VL4 LINE L1 -5444 858 239 6 1179 235 324 35 18 chr17 77930399 77930512 -17342139 + ORR1C1 LTR MaLR 9 123 -255 6 1179 23 33 0 0 chr17 77930660 77930690 -17341961 + AT_rich Low_complexity Low_complexity 1 30 0 6 1179 289 176 13 13 chr17 77931065 77931140 -17341511 + (TATG)n Simple_repeat Simple_repeat 1 75 0 6 1179 213 196 0 0 chr17 77931369 77931420 -17341231 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1179 355 310 77 19 chr17 77931430 77931637 -17341014 - Lx9 LINE L1 -221 7423 7205 6 1179 7066 76 2 11 chr17 77931740 77932704 -17339947 + L1Md_F2 LINE L1 5625 6579 -3 6 1179 407 295 9 0 chr17 77933078 77933183 -17339468 + Kanga1 DNA Tc2 3 108 -1637 6 1179 246 62 0 0 chr17 77934077 77934109 -17338542 + (T)n Simple_repeat Simple_repeat 1 32 0 6 1179 26 30 0 0 chr17 77934845 77934878 -17337773 + AT_rich Low_complexity Low_complexity 1 33 0 6 1179 22 56 0 0 chr17 77934893 77934929 -17337722 + AT_rich Low_complexity Low_complexity 1 36 0 6 1179 1988 116 86 39 chr17 77935036 77935396 -17337255 - L1_Mus4 LINE L1 0 6636 6260 6 1179 264 30 0 0 chr17 77935412 77935445 -17337206 + (TTG)n Simple_repeat Simple_repeat 2 34 0 6 1179 1286 302 62 18 chr17 77935592 77936254 -17336397 - L1MA9 LINE L1 -305 6007 5317 6 1179 192 77 0 0 chr17 77936261 77936287 -17336364 + (TTG)n Simple_repeat Simple_repeat 2 27 0 6 1179 4246 154 62 46 chr17 77936287 77936830 -17335821 - Lx2B LINE L1 -13 6987 6437 6 1179 3120 63 5 2 chr17 77936830 77937225 -17335426 - MTA_Mm LTR MaLR 0 396 1 6 1179 4246 154 62 46 chr17 77937225 77937490 -17335161 - Lx2B LINE L1 -564 6436 6166 6 1179 2272 251 11 23 chr17 77938063 77938594 -17334057 - Lx7 LINE L1 -709 6987 6463 6 1179 1051 211 14 19 chr17 77938594 77938807 -17333844 - B3 SINE B2 -4 212 1 6 1179 230 229 0 32 chr17 77938974 77939037 -17333614 - Lx7 LINE L1 -25 7671 7611 6 1179 558 270 53 20 chr17 77939254 77939405 -17333246 - ID_B1 SINE B4 0 224 69 6 1179 342 0 0 0 chr17 77939454 77939492 -17333159 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1179 3598 232 153 18 chr17 77939558 77941231 -17331420 + Lx6 LINE L1 5335 7243 -217 6 1179 790 205 19 6 chr17 77941232 77941394 -17331257 - B2_Mm2 SINE B2 -31 164 1 6 1179 889 255 18 9 chr17 77941394 77941616 -17331035 + Lx6 LINE L1 7231 7454 -6 6 1179 26 0 0 0 chr17 77941683 77941709 -17330942 + AT_rich Low_complexity Low_complexity 1 26 0 6 1179 642 153 0 0 chr17 77941796 77941907 -17330744 + (TA)n Simple_repeat Simple_repeat 2 112 0 6 1179 1638 240 52 8 chr17 77941972 77942354 -17330297 - MTC LTR MaLR -20 401 3 6 1179 33672 72 6 1 chr17 77943264 77949425 -17323226 - L1Md_F2 LINE L1 0 6582 392 6 1179 1211 281 122 43 chr17 77950563 77951116 -17321535 - Lx6 LINE L1 -43 7417 6455 6 1179 201 13 0 133 chr17 77951121 77951211 -17321440 + (GTTTG)n Simple_repeat Simple_repeat 2 79 0 6 1179 378 0 0 0 chr17 77951213 77951255 -17321396 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1179 587 285 53 5 chr17 77951258 77951445 -17321206 - Lx6 LINE L1 -726 6734 6539 6 1179 375 104 0 0 chr17 77951443 77951491 -17321160 + Lx5 LINE L1 3577 3624 -2253 6 1179 787 172 0 58 chr17 77951511 77951684 -17320967 + Lx5 LINE L1 3790 3952 -1928 6 1179 270 73 0 0 chr17 77952384 77952425 -17320226 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 1179 4042 216 35 47 chr17 77952425 77952742 -17319909 + Lx5 LINE L1 4205 4516 -1364 6 1179 1397 45 0 11 chr17 77952742 77952924 -17319727 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 6 1179 4042 216 35 47 chr17 77952924 77953120 -17319531 + Lx5 LINE L1 4517 4726 -1154 6 1179 360 0 0 0 chr17 77953120 77953160 -17319491 + (TAA)n Simple_repeat Simple_repeat 3 42 0 6 1179 4042 216 35 47 chr17 77953160 77953275 -17319376 + Lx5 LINE L1 4727 4826 -1054 6 1179 1125 62 7 0 chr17 77953275 77953419 -17319232 - B1_Mus2 SINE Alu 0 147 3 6 1179 4042 216 35 47 chr17 77953419 77953962 -17318689 + Lx5 LINE L1 4827 5364 -516 6 1179 4535 176 89 43 chr17 77953962 77955874 -17316777 + L1_Mur1 LINE L1 32 1945 -3941 6 1179 586 326 35 43 chr17 77955860 77956241 -17316410 + Lx5 LINE L1 5934 6339 -711 6 1179 7157 172 16 25 chr17 77956358 77957780 -17314871 - L1_Mur2 LINE L1 -620 5257 3848 6 1179 973 286 102 11 chr17 77958098 77958469 -17314182 + RMER21B LTR ERV1 106 510 -332 6 1179 603 296 0 0 chr17 77958578 77958740 -17313911 - RSINE1 SINE B4 0 165 4 6 1179 644 290 113 8 chr17 77960944 77961191 -17311460 - B4A SINE B4 -18 274 2 6 1179 377 224 72 111 chr17 77962847 77963028 -17309623 - HAL1-3A_ME LINE L1 -712 2146 1973 6 1179 381 141 0 0 chr17 77963048 77963119 -17309532 + (TA)n Simple_repeat Simple_repeat 1 71 0 6 1179 27 92 0 0 chr17 77963170 77963246 -17309405 + AT_rich Low_complexity Low_complexity 1 76 0 6 1179 602 244 0 8 chr17 77963285 77963417 -17309234 + B1_Mus1 SINE Alu 1 131 -17 6 1179 194 62 31 0 chr17 77963419 77963451 -17309200 + (CAA)n Simple_repeat Simple_repeat 1 33 0 6 1179 237 158 0 0 chr17 77963832 77963870 -17308781 + T-rich Low_complexity Low_complexity 1 38 0 6 1179 344 308 56 84 chr17 77964446 77964730 -17307921 + L1MB3 LINE L1 5899 6174 -9 6 1179 5487 75 7 3 chr17 77964859 77965604 -17307047 - L1Md_F2 LINE L1 -416 5467 4720 6 1179 582 76 25 0 chr17 77965598 77965677 -17306974 + L1Md_F2 LINE L1 5505 5585 -298 6 1179 7486 71 1 13 chr17 77965678 77966676 -17305975 + L1Md_F2 LINE L1 5587 6572 -10 6 1179 1062 98 0 0 chr17 77966703 77966846 -17305805 + B1_Mus2 SINE Alu 5 147 0 6 1179 266 298 86 30 chr17 77967082 77967279 -17305372 - L1M5 LINE L1 -1468 4678 4471 6 1179 1148 68 0 0 chr17 77968991 77969137 -17303514 + B1_Mm SINE Alu 1 146 -1 6 1179 588 29 0 0 chr17 77969137 77969207 -17303444 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 6 1179 34 65 0 0 chr17 77969255 77969317 -17303334 + AT_rich Low_complexity Low_complexity 1 62 0 6 1179 1182 188 13 5 chr17 77972281 77972505 -17300146 + URR1A DNA MER1_type 1 226 0 6 1179 531 0 0 0 chr17 77972638 77972697 -17299954 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 6 1179 743 197 22 0 chr17 77973294 77973431 -17299220 + B1_Mur4 SINE Alu 1 140 -10 6 1179 926 282 35 48 chr17 77973488 77973804 -17298847 + Lx8 LINE L1 6211 6522 -951 6 1179 24 67 0 0 chr17 77973901 77973946 -17298705 + AT_rich Low_complexity Low_complexity 1 45 0 6 1179 1569 46 0 0 chr17 77973947 77974143 -17298508 - L1_Mus1 LINE L1 0 6567 6372 6 1179 1790 277 5 9 chr17 77974143 77974570 -17298081 - Lx6 LINE L1 -30 7430 7006 6 1179 682 270 49 5 chr17 77974622 77974827 -17297824 + B3 SINE B2 2 215 -1 6 1179 467 335 60 30 chr17 77975189 77975653 -17296998 + L1MB8 LINE L1 5701 6178 0 6 1179 404 313 221 21 chr17 77975973 77976279 -17296372 + L1MCa LINE L1 804 1179 -5329 6 1179 369 0 0 0 chr17 77976279 77976320 -17296331 + (TAA)n Simple_repeat Simple_repeat 2 42 0 6 1179 404 313 221 21 chr17 77976320 77976389 -17296262 + L1MCa LINE L1 1180 1254 -5254 6 1179 323 262 54 10 chr17 77976589 77976714 -17295937 + L1MCa LINE L1 1580 1770 -4647 6 1179 1914 246 28 70 chr17 77977002 77977640 -17295011 - RMER19C LTR ERVK 0 611 1 6 1179 334 331 112 39 chr17 77978832 77979090 -17293561 + B4 SINE B4 2 278 -14 6 1179 1298 302 37 12 chr17 77979120 77979603 -17293048 + RMER5 LTR ERV1 4 498 -36 6 1179 186 209 0 0 chr17 77981063 77981106 -17291545 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1179 2615 246 34 73 chr17 77981617 77982453 -17290198 + RLTR40 LTR ERVK 7 809 -8 6 1179 480 287 60 20 chr17 77982641 77982840 -17289811 + RLTR6-int LTR ERV1 1289 1495 -6283 6 1179 4836 137 26 4 chr17 77983004 77983529 -17289122 - L1_Mur2 LINE L1 -1500 4377 3842 6 1179 303 28 0 0 chr17 77983529 77983565 -17289086 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 6 1179 4836 137 26 4 chr17 77983565 77983869 -17288782 - L1_Mur2 LINE L1 -2036 3841 3530 6 1179 2296 97 15 25 chr17 77984234 77984561 -17288090 - ORR1A2 LTR MaLR -3 324 1 6 1179 1876 103 15 0 chr17 77984561 77984834 -17287817 - ORR1A2-int LTR MaLR 0 1963 1687 6 1179 3757 189 98 41 chr17 77984826 77984978 -17287673 - ORR1A2-int LTR MaLR -955 1008 873 6 1179 3228 58 8 0 chr17 77984978 77985371 -17287280 + MTA_Mm LTR MaLR 1 396 0 7 1179 3757 189 98 41 chr17 77985371 77986167 -17286484 - ORR1A2-int LTR MaLR -1091 872 7 6 1179 1233 158 79 0 chr17 77986161 77986364 -17286287 - ORR1A2 LTR MaLR -108 219 1 6 1179 219 36 0 0 chr17 77987437 77987465 -17285186 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 7 1179 872 261 0 27 chr17 77987537 77987758 -17284893 + B3 SINE B2 2 216 0 7 1179 23 0 0 0 chr17 77987784 77987807 -17284844 + AT_rich Low_complexity Low_complexity 1 23 0 7 1180 961 28 35 0 chr17 77988097 77988238 -17284413 + (TAGA)n Simple_repeat Simple_repeat 4 149 0 7 1180 353 345 102 1 chr17 77988471 77988646 -17284005 - MLT1G1 LTR MaLR -5 574 358 7 1180 1215 288 108 39 chr17 77988832 77989765 -17282886 - L1M2 LINE L1 -2042 4101 3104 7 1180 23 0 0 0 chr17 77989778 77989801 -17282850 + AT_rich Low_complexity Low_complexity 1 23 0 7 1180 216 350 101 9 chr17 77990890 77991118 -17281533 + L2 LINE L2 2707 2955 -464 7 1180 2056 214 149 9 chr17 77991251 77991822 -17280829 + Lx9 LINE L1 6989 7639 -5 7 1180 365 307 147 32 chr17 77992016 77992268 -17280383 + RLTR9B LTR ERVK 140 437 0 7 1180 462 108 0 0 chr17 77992379 77992453 -17280198 + (TG)n Simple_repeat Simple_repeat 1 74 0 7 1180 429 171 50 12 chr17 77994093 77994360 -17278291 + (TG)n Simple_repeat Simple_repeat 1 277 0 7 1180 528 195 23 11 chr17 77994376 77994552 -17278099 + (TG)n Simple_repeat Simple_repeat 2 179 0 7 1180 25 75 0 0 chr17 77994728 77994781 -17277870 + AT_rich Low_complexity Low_complexity 1 53 0 7 1180 216 0 0 0 chr17 77996104 77996128 -17276523 + (T)n Simple_repeat Simple_repeat 1 24 0 7 1180 312 363 54 32 chr17 77996824 77997009 -17275642 + MIRb SINE MIR 8 196 -72 7 1180 231 36 0 0 chr17 77997590 77997618 -17275033 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 7 1180 22 0 0 0 chr17 77998908 77998930 -17273721 + AT_rich Low_complexity Low_complexity 1 22 0 7 1180 222 37 0 0 chr17 78002131 78002158 -17270493 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 1 1180 847 172 0 0 chr17 78002158 78002292 -17270359 - B1_Mur4 SINE Alu -12 138 5 2 1180 677 30 0 39 chr17 78003315 78003419 -17269232 + (TTCTC)n Simple_repeat Simple_repeat 5 104 0 3 1180 374 371 90 26 chr17 78003446 78003601 -17269050 - RSINE1 SINE B4 0 165 1 4 1180 368 392 38 17 chr17 78005033 78005269 -17267382 - MLT1A LTR MaLR -119 255 15 5 1180 240 323 10 40 chr17 78005415 78005515 -17267136 - Lx8 LINE L1 -136 7337 7241 6 1180 495 0 0 0 chr17 78005520 78005575 -17267076 + (GA)n Simple_repeat Simple_repeat 1 55 0 7 1180 23 0 0 0 chr17 78005889 78005912 -17266739 + GC_rich Low_complexity Low_complexity 1 23 0 8 1180 4400 46 0 4 chr17 78006320 78006863 -17265788 + L1Md_F2 LINE L1 6042 6582 0 9 1180 249 57 0 0 chr17 78006960 78006995 -17265656 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1180 810 301 21 21 chr17 78007001 78007283 -17265368 - Lx8 LINE L1 -1024 6449 6168 6 1180 444 296 126 30 chr17 78007610 78008136 -17264515 - Lx8 LINE L1 -1780 5916 5329 6 1180 438 314 128 38 chr17 78008353 78008641 -17264010 + MLT1A0 LTR MaLR 1 314 -51 1 1180 265 345 100 85 chr17 78008799 78008944 -17263707 - ORR1E LTR MaLR -52 307 161 1 1180 1531 201 33 44 chr17 78008944 78009309 -17263342 - ORR1B2 LTR MaLR -4 363 3 1 1180 265 345 100 85 chr17 78009309 78009423 -17263228 - ORR1E LTR MaLR -199 160 44 1 1180 366 287 108 89 chr17 78010481 78010498 -17262153 - RSINE1 SINE B4 -4 161 145 1 1180 1112 46 7 0 chr17 78010498 78010649 -17262002 + (TG)n Simple_repeat Simple_repeat 1 152 0 1 1180 366 287 108 89 chr17 78010649 78010788 -17261863 - RSINE1 SINE B4 -21 144 2 1 1180 555 281 137 0 chr17 78011162 78011490 -17261161 - L1MA8 LINE L1 0 6291 5919 1 1180 254 312 116 0 chr17 78011535 78011647 -17261004 - L1MA8 LINE L1 -482 5830 5706 1 1180 310 273 31 5 chr17 78013089 78013209 -17259442 + CT-rich Low_complexity Low_complexity 1 123 0 1 1180 231 331 60 91 chr17 78013528 78013555 -17259096 + B3A SINE B2 1 27 -171 1 1180 222 37 0 0 chr17 78013555 78013582 -17259069 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1180 231 331 60 91 chr17 78013582 78013753 -17258898 + B3A SINE B2 28 193 -5 1 1180 396 59 0 0 chr17 78015300 78015351 -17257300 + (A)n Simple_repeat Simple_repeat 1 51 0 2 1180 552 67 53 79 chr17 78015382 78015496 -17257155 - Lx LINE L1 -6 6648 6538 2 1180 459 311 76 76 chr17 78015750 78015987 -17256664 - B4 SINE B4 -53 239 3 2 1180 545 293 141 36 chr17 78017563 78017896 -17254755 - RLTR9A LTR ERVK 0 368 1 2 1180 405 136 0 0 chr17 78017962 78018028 -17254623 + (TAG)n Simple_repeat Simple_repeat 3 68 0 2 1180 286 378 22 7 chr17 78018138 78018274 -17254377 + MER102c DNA MER1_type 72 209 -122 2 1180 1158 202 107 16 chr17 78018434 78018797 -17253854 - Lx9 LINE L1 -7 7637 7242 2 1180 697 300 60 5 chr17 78018956 78019157 -17253494 - B3 SINE B2 0 216 5 2 1180 240 349 65 25 chr17 78019281 78019481 -17253170 - L2a LINE L2 -6 3420 3213 2 1180 311 298 170 18 chr17 78019691 78019862 -17252789 - RMER15 LTR ERVL -43 532 336 2 1180 606 39 0 0 chr17 78020821 78020898 -17251753 + (CA)n Simple_repeat Simple_repeat 1 77 0 3 1180 400 376 33 67 chr17 78021818 78022117 -17250534 + B4 SINE B4 1 289 -3 3 1180 232 227 0 29 chr17 78022118 78022186 -17250465 + (CATA)n Simple_repeat Simple_repeat 3 68 0 3 1180 366 296 10 30 chr17 78022526 78022627 -17250024 - 7SK RNA RNA -95 236 138 3 1180 360 43 0 0 chr17 78022639 78022685 -17249966 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1180 360 222 76 61 chr17 78022687 78022884 -17249767 + Lx7 LINE L1 7481 7680 -16 3 1180 2318 158 4 191 chr17 78023136 78023393 -17249258 - RLTR41 LTR ERV1 0 446 226 3 1180 1201 55 7 0 chr17 78023393 78023539 -17249112 - B1_Mus1 SINE Alu 0 148 2 3 1180 2318 158 4 191 chr17 78023539 78023830 -17248821 - RLTR41 LTR ERV1 -221 225 1 3 1180 571 312 56 21 chr17 78023914 78024291 -17248360 - RLTR6-int LTR ERV1 -61 7717 7328 3 1180 1732 303 62 57 chr17 78024606 78026161 -17246490 - MuRRS4-int LTR ERV1 -1997 5609 2764 3 1180 924 327 64 63 chr17 78026226 78027571 -17245080 - MuRRS4-int LTR ERV1 -5209 2569 987 3 1180 259 306 26 26 chr17 78028022 78028136 -17244515 - MuRRS4-int LTR ERV1 -6856 700 587 3 1180 2818 136 7 33 chr17 78028634 78029091 -17243560 - RLTR41 LTR ERV1 -1 445 1 4 1180 4766 203 29 7 chr17 78029765 78030736 -17241915 + Lx5 LINE L1 6041 7032 -18 4 1180 237 65 0 0 chr17 78030736 78030767 -17241884 + (TTAA)n Simple_repeat Simple_repeat 4 34 0 4 1180 252 0 0 0 chr17 78031763 78031791 -17240860 + (T)n Simple_repeat Simple_repeat 1 28 0 4 1180 264 286 0 23 chr17 78033176 78033202 -17239449 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1180 450 53 0 0 chr17 78033202 78033259 -17239392 + (TA)n Simple_repeat Simple_repeat 1 57 0 4 1180 264 286 0 23 chr17 78033259 78033318 -17239333 + (CA)n Simple_repeat Simple_repeat 1 59 0 4 1180 22 0 0 0 chr17 78034601 78034623 -17238028 + AT_rich Low_complexity Low_complexity 1 22 0 4 1180 263 312 155 10 chr17 78035012 78035108 -17237543 + ORR1E LTR MaLR 1 110 -249 4 1180 494 248 28 31 chr17 78035108 78035362 -17237289 + RMER17C LTR ERVK 1 253 -157 4 1180 509 233 42 98 chr17 78035363 78035649 -17237002 + RMER17C LTR ERVK 109 378 -32 5 1180 226 321 12 36 chr17 78035776 78035860 -17236791 + ORR1E LTR MaLR 258 339 -40 4 1180 287 277 18 18 chr17 78036776 78036890 -17235761 - L1MA4 LINE L1 -370 5930 5817 5 1180 1204 302 71 17 chr17 78036904 78037436 -17235215 - Lx8 LINE L1 -13 7460 6900 5 1180 312 284 117 44 chr17 78037457 78037755 -17234896 - L1MA4 LINE L1 -507 5793 5474 5 1180 400 285 59 5 chr17 78037769 78038044 -17234607 - L1MA4 LINE L1 -868 5429 5134 5 1180 1284 291 66 36 chr17 78038471 78039371 -17233280 + L1M2 LINE L1 2165 3091 -3052 5 1180 195 125 0 0 chr17 78039460 78039500 -17233151 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 5 1180 245 29 0 29 chr17 78040053 78040088 -17232563 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1180 1115 73 0 0 chr17 78040088 78040224 -17232427 - B1_Mm SINE Alu -10 137 2 5 1180 227 140 29 39 chr17 78040581 78040652 -17231999 + T-rich Low_complexity Low_complexity 39 108 0 5 1180 411 21 0 0 chr17 78040652 78040700 -17231951 + (TTGG)n Simple_repeat Simple_repeat 4 51 0 5 1180 227 140 29 39 chr17 78040700 78040732 -17231919 + T-rich Low_complexity Low_complexity 7 38 0 5 1180 1125 75 7 0 chr17 78040732 78040878 -17231773 - B1_Mus1 SINE Alu 0 148 2 6 1180 288 0 0 0 chr17 78040880 78040912 -17231739 + (TTG)n Simple_repeat Simple_repeat 2 33 0 6 1180 646 238 67 24 chr17 78040932 78041096 -17231555 + B4A SINE B4 104 274 -18 6 1180 292 295 80 32 chr17 78041739 78042114 -17230537 - L1MC4a LINE L1 -15 7867 7475 6 1180 374 368 49 6 chr17 78042316 78042499 -17230152 - L1MC4a LINE L1 -613 7269 7079 6 1180 629 304 55 59 chr17 78042562 78042817 -17229834 - B4A SINE B4 -12 280 27 6 1180 397 315 51 14 chr17 78043231 78043447 -17229204 - L1MC1 LINE L1 -140 6193 5970 6 1180 976 266 125 33 chr17 78043475 78044352 -17228299 - L1MC1 LINE L1 -432 5901 4946 6 1180 422 320 125 41 chr17 78044419 78044882 -17227769 - L1M4 LINE L1 -1227 4919 4418 6 1180 388 0 39 0 chr17 78044883 78044935 -17227716 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 6 1180 638 88 11 0 chr17 78044950 78045041 -17227610 - ORR1A1 LTR MaLR 0 346 255 6 1180 1097 87 0 0 chr17 78045042 78045180 -17227471 - B1_Mm SINE Alu -9 138 1 6 1180 1818 89 4 8 chr17 78045184 78045444 -17227207 - L1Md_F2 LINE L1 0 6582 6324 7 1180 3517 67 51 4 chr17 78045454 78045921 -17226730 + L1_Mus2 LINE L1 6078 6566 0 7 1180 213 39 0 0 chr17 78046243 78046269 -17226382 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 1180 584 288 69 16 chr17 78046286 78046533 -17226118 + Lx9 LINE L1 7173 7432 -212 7 1180 1254 103 2 2 chr17 78046558 78047021 -17225630 + (TG)n Simple_repeat Simple_repeat 1 463 0 7 1180 317 34 68 0 chr17 78047424 78047483 -17225168 + (TTG)n Simple_repeat Simple_repeat 2 64 0 7 1180 624 27 0 0 chr17 78047924 78047998 -17224653 + (TC)n Simple_repeat Simple_repeat 1 74 0 7 1180 683 138 7 0 chr17 78050466 78050604 -17222047 + (TG)n Simple_repeat Simple_repeat 2 140 0 7 1180 310 125 0 0 chr17 78050621 78050669 -17221982 - HAL1-3A_ME LINE L1 -840 2018 1971 7 1180 345 100 0 0 chr17 78051375 78051425 -17221226 - Lx8 LINE L1 -136 7337 7288 7 1180 228 254 0 0 chr17 78051600 78051659 -17220992 + A-rich Low_complexity Low_complexity 1 59 0 8 1180 1421 70 16 0 chr17 78051999 78052184 -17220467 + B2_Mm2 SINE B2 1 188 -7 8 1180 18713 35 2 7 chr17 78052332 78055411 -17217240 - L1Md_F2 LINE L1 0 6582 3528 8 1180 27 49 0 0 chr17 78055542 78055583 -17217068 + AT_rich Low_complexity Low_complexity 1 41 0 8 1180 376 316 21 0 chr17 78055617 78055712 -17216939 - B1F SINE Alu -52 97 1 8 1180 511 236 0 11 chr17 78055757 78055851 -17216800 + URR1B DNA MER1_type 1 93 -132 8 1180 2073 47 36 7 chr17 78055851 78056129 -17216522 + L1_Mus2 LINE L1 6179 6464 -102 8 1180 536 42 14 0 chr17 78056133 78056204 -17216447 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 8 1180 652 169 0 46 chr17 78056204 78056236 -17216415 + URR1B DNA MER1_type 82 112 -113 8 1180 2456 153 0 71 chr17 78056236 78056699 -17215952 + RLTR23 LTR ERV1 1 430 0 8 1180 655 169 0 46 chr17 78056699 78056796 -17215855 + URR1B DNA MER1_type 113 205 -20 8 1180 1620 171 56 61 chr17 78057095 78057507 -17215144 - RMER17C LTR ERVK 0 410 1 8 1180 23 33 0 0 chr17 78058086 78058116 -17214535 + AT_rich Low_complexity Low_complexity 1 30 0 9 1180 180 0 0 0 chr17 78059033 78059053 -17213598 + (CAAAAA)n Simple_repeat Simple_repeat 2 21 0 9 1180 1662 178 43 92 chr17 78060026 78060491 -17212160 + RMER17C-int LTR ERVK 1133 1574 -1664 9 1180 433 172 103 0 chr17 78060477 78060564 -17212087 + RMER17C-int LTR ERVK 3142 3237 -1 9 1180 951 196 35 186 chr17 78060565 78061048 -17211603 + RMER17C LTR ERVK 1 410 0 9 1180 411 294 88 57 chr17 78061884 78062152 -17210499 + L1MEc LINE L1 842 1119 -5281 9 1180 258 32 0 0 chr17 78062152 78062183 -17210468 + (GGGGA)n Simple_repeat Simple_repeat 2 32 0 9 1180 411 294 88 57 chr17 78062183 78062231 -17210420 + L1MEc LINE L1 1120 1168 -5232 9 1180 408 309 38 49 chr17 78062301 78062485 -17210166 + L1MEc LINE L1 1289 1470 -4930 9 1180 4437 44 2 0 chr17 78062518 78063058 -17209593 + L1Md_F2 LINE L1 6042 6582 0 9 1180 308 282 144 23 chr17 78063204 78063378 -17209273 + L1MEc LINE L1 1747 1941 -4459 9 1180 254 371 113 0 chr17 78063497 78063621 -17209030 - Tigger5 DNA MER2_type -2203 203 66 9 1180 1255 249 45 123 chr17 78063622 78064062 -17208589 + MTD LTR MaLR 6 411 -8 9 1180 1555 28 22 0 chr17 78064087 78064269 -17208382 - B2_Mm1t SINE B2 -6 187 2 9 1180 27 0 0 0 chr17 78064279 78064306 -17208345 + AT_rich Low_complexity Low_complexity 1 27 0 9 1180 22165 4 0 0 chr17 78064335 78066845 -17205806 + L1Md_A LINE L1 3077 5586 -297 1 1180 9029 2 0 0 chr17 78066845 78067841 -17204810 + L1Md_A LINE L1 5587 6582 0 1 1180 417 28 54 27 chr17 78067914 78067988 -17204663 + (CAGAGA)n Simple_repeat Simple_repeat 3 78 0 1 1180 409 301 26 9 chr17 78068144 78068258 -17204393 - MT2A LTR ERVL -121 412 297 1 1180 323 200 0 0 chr17 78068435 78068490 -17204161 + polypyrimidine Low_complexity Low_complexity 1 55 0 1 1180 672 211 0 0 chr17 78068491 78068638 -17204013 + CT-rich Low_complexity Low_complexity 34 180 0 1 1180 1847 22 0 13 chr17 78068762 78068990 -17203661 + L1Md_F3 LINE L1 6359 6583 -1 1 1180 261 0 0 0 chr17 78069183 78069212 -17203439 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1180 266 367 9 9 chr17 78069302 78069412 -17203239 - MIR SINE MIR -67 141 32 1 1180 1050 101 0 0 chr17 78070141 78070351 -17202300 + (TG)n Simple_repeat Simple_repeat 1 210 0 1 1180 990 113 0 0 chr17 78071478 78071629 -17201022 + (CA)n Simple_repeat Simple_repeat 2 152 0 1 1180 253 291 67 98 chr17 78071947 78072111 -17200540 - HAL1 LINE L1 -1030 1477 1319 1 1180 23 0 0 0 chr17 78072258 78072281 -17200370 + AT_rich Low_complexity Low_complexity 1 23 0 1 1180 23 0 0 0 chr17 78072941 78072964 -17199687 + AT_rich Low_complexity Low_complexity 1 23 0 1 1180 22 35 0 0 chr17 78074628 78074657 -17197994 + AT_rich Low_complexity Low_complexity 1 29 0 1 1180 306 324 202 24 chr17 78075242 78075495 -17197156 - Tigger9b DNA MER2_type -12 612 315 1 1180 22 80 0 0 chr17 78076538 78076588 -17196063 + AT_rich Low_complexity Low_complexity 1 50 0 1 1180 191 152 0 21 chr17 78076877 78076924 -17195727 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 1 1180 333 357 56 14 chr17 78078603 78078816 -17193835 - MIR SINE MIR -11 251 30 1 1180 188 319 115 30 chr17 78079859 78080024 -17192627 + MIRc SINE MIR 39 217 -51 1 1180 352 279 129 15 chr17 78080148 78080400 -17192251 - MER33 DNA MER1_type -2 322 45 1 1180 1604 148 14 4 chr17 78080579 78080858 -17191793 + Lx LINE L1 6373 6654 0 1 1180 24 0 0 0 chr17 78081738 78081762 -17190889 + AT_rich Low_complexity Low_complexity 1 24 0 1 1180 359 375 7 0 chr17 78082165 78082309 -17190342 - RSINE1 SINE B4 -19 146 2 1 1180 3984 36 0 0 chr17 78082507 78082997 -17189654 - L1_Mus1 LINE L1 0 6567 6090 1 1180 788 59 17 0 chr17 78083008 78083126 -17189525 + (TCTCTG)n Simple_repeat Simple_repeat 1 120 0 1 1180 432 0 0 0 chr17 78083128 78083176 -17189475 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1180 712 314 23 0 chr17 78083180 78083352 -17189299 - B3A SINE B2 -22 176 1 1 1180 1370 280 53 14 chr17 78083495 78083988 -17188663 - L1MA5 LINE L1 -218 6082 5571 1 1180 184 379 63 14 chr17 78085039 78085181 -17187470 + L2a LINE L2 3225 3373 -53 1 1180 378 310 1 0 chr17 78085212 78085317 -17187334 + MER58A DNA MER1_type 50 155 -69 1 1180 272 315 55 9 chr17 78085357 78085466 -17187185 + PB1D7 SINE Alu 1 114 -6 1 1180 1127 82 0 0 chr17 78085478 78085625 -17187026 + B1_Mus1 SINE Alu 2 148 0 1 1180 430 240 39 139 chr17 78087695 78087903 -17184748 - B2_Mm2 SINE B2 0 195 9 1 1180 27 49 0 0 chr17 78088091 78088132 -17184519 + AT_rich Low_complexity Low_complexity 1 41 0 1 1180 686 345 66 15 chr17 78089525 78089796 -17182855 - B4A SINE B4 -5 287 3 1 1180 2460 150 13 22 chr17 78090213 78090662 -17181989 - RLTR11B LTR ERVK -8 445 1 1 1180 249 281 0 95 chr17 78091394 78091520 -17181131 + Lx7 LINE L1 7559 7672 -24 1 1180 953 210 30 5 chr17 78091558 78091759 -17180892 + B3 SINE B2 1 206 -10 1 1180 2850 72 0 15 chr17 78091799 78092191 -17180460 + L1Md_F2 LINE L1 6185 6570 -12 1 1180 536 340 78 24 chr17 78092397 78092819 -17179832 - L1M5 LINE L1 -2167 3979 3535 1 1180 371 285 26 92 chr17 78093129 78093477 -17179174 - L1M5 LINE L1 -3711 2435 2111 1 1180 399 274 30 115 chr17 78093571 78093736 -17178915 - MLT2F LTR ERVL -12 651 501 1 1180 1225 153 14 5 chr17 78094055 78094272 -17178379 - Lx5 LINE L1 -1057 5993 5775 1 1180 3541 256 63 27 chr17 78094282 78094584 -17178067 + Lx5 LINE L1 6138 6438 -612 1 1180 2731 214 98 37 chr17 78094584 78095260 -17177391 + RMER6D LTR ERVK 4 720 0 1 1180 3541 256 63 27 chr17 78095260 78095832 -17176819 + Lx5 LINE L1 6439 7043 -7 1 1180 255 356 8 0 chr17 78095861 78095979 -17176672 + GA-rich Low_complexity Low_complexity 2 120 0 1 1180 241 283 67 0 chr17 78095979 78096039 -17176612 + RSINE1 SINE B4 3 66 -99 1 1180 327 65 0 0 chr17 78096097 78096143 -17176508 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1180 540 0 0 0 chr17 78096143 78096202 -17176449 + (GA)n Simple_repeat Simple_repeat 2 61 0 1 1180 740 11 11 0 chr17 78096406 78096495 -17176156 + (TC)n Simple_repeat Simple_repeat 1 90 0 1 1180 34032 68 6 6 chr17 78097626 78102811 -17169840 + L1Md_F3 LINE L1 447 5586 -297 1 1180 7902 48 2 1 chr17 78102811 78103796 -17168855 + L1Md_F3 LINE L1 5587 6572 -12 1 1180 189 171 0 0 chr17 78103912 78103947 -17168704 + A-rich Low_complexity Low_complexity 5 39 0 1 1180 330 321 19 9 chr17 78103968 78104075 -17168576 + PB1D10 SINE Alu 10 117 0 1 1180 654 58 0 0 chr17 78104456 78104543 -17168108 + (CA)n Simple_repeat Simple_repeat 2 88 0 1 1180 452 311 55 55 chr17 78105203 78105475 -17167176 + Lx8 LINE L1 7165 7436 -37 1 1180 795 247 50 5 chr17 78105527 78105726 -17166925 + B3 SINE B2 1 208 -8 1 1180 1883 265 41 21 chr17 78105868 78106428 -17166223 - Lx9 LINE L1 -712 6932 6362 1 1180 357 109 0 0 chr17 78106437 78106492 -17166159 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1180 347 394 70 40 chr17 78107705 78108172 -17164479 + L2a LINE L2 2690 3170 -256 1 1180 911 103 0 39 chr17 78108225 78108406 -17164245 + (TTTC)n Simple_repeat Simple_repeat 2 175 0 1 1180 699 46 0 0 chr17 78110281 78110368 -17162283 + (TA)n Simple_repeat Simple_repeat 1 87 0 1 1180 195 225 37 12 chr17 78110933 78111014 -17161637 + A-rich Low_complexity Low_complexity 3 85 0 1 1180 909 144 11 6 chr17 78111017 78111192 -17161459 + GA-rich Low_complexity Low_complexity 3 178 0 1 1180 25 0 0 0 chr17 78113010 78113035 -17159616 + AT_rich Low_complexity Low_complexity 1 25 0 1 1180 601 287 57 38 chr17 78113181 78113391 -17159260 + MTC LTR MaLR 6 219 -202 1 1180 1083 317 68 25 chr17 78113534 78114046 -17158605 + RMER5 LTR ERV1 1 534 0 1 1180 201 39 0 0 chr17 78114963 78114989 -17157662 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1180 189 0 0 0 chr17 78115530 78115551 -17157100 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1180 1033 222 14 0 chr17 78115557 78115764 -17156887 + B3 SINE B2 1 210 -6 1 1180 972 98 14 0 chr17 78115768 78115911 -17156740 + L1_Mus2 LINE L1 6420 6564 -2 1 1180 365 368 30 35 chr17 78118001 78118201 -17154450 - MIRb SINE MIR -60 208 10 1 147 1605 188 13 100 chr17 78118605 78119054 -17153597 - RLTR11A LTR ERVK 0 528 119 1 1181 228 280 64 39 chr17 78119280 78119358 -17153293 + L2c LINE L2 3088 3167 -220 1 1181 1693 176 52 32 chr17 78119505 78119852 -17152799 + Lx5 LINE L1 6694 7047 -3 1 1181 212 177 0 75 chr17 78120144 78120211 -17152440 + T-rich Low_complexity Low_complexity 1 62 0 1 1181 205 161 0 0 chr17 78120230 78120261 -17152390 + polypyrimidine Low_complexity Low_complexity 2 32 0 1 1181 195 100 0 0 chr17 78121151 78121181 -17151470 + (TTGG)n Simple_repeat Simple_repeat 1 30 0 1 1181 486 260 101 15 chr17 78121534 78121733 -17150918 - MER2 DNA MER2_type -27 318 103 1 1181 567 359 115 31 chr17 78122775 78123487 -17149164 - L1MC4 LINE L1 -537 7505 6734 1 1181 6277 40 1 1 chr17 78123628 78124389 -17148262 - L1Md_T LINE L1 0 6582 5822 1 1181 284 355 24 0 chr17 78124401 78124525 -17148126 - L1MC4 LINE L1 -2362 5520 5394 1 1181 1304 224 12 65 chr17 78125338 78125539 -17147112 + ORR1C2 LTR MaLR 1 187 -197 1 1181 1043 94 0 6 chr17 78125539 78125720 -17146931 + (TC)n Simple_repeat Simple_repeat 1 180 0 1 1181 1304 224 12 65 chr17 78125720 78125920 -17146731 + ORR1C2 LTR MaLR 188 381 -3 1 1181 2427 93 8 40 chr17 78126027 78126407 -17146244 + L1Md_F2 LINE L1 6215 6582 0 1 1181 34 24 0 0 chr17 78126481 78126522 -17146129 + AT_rich Low_complexity Low_complexity 1 41 0 1 1181 555 188 0 0 chr17 78126636 78126753 -17145898 + GA-rich Low_complexity Low_complexity 2 118 0 1 1181 285 135 0 0 chr17 78126767 78126819 -17145832 + (ATG)n Simple_repeat Simple_repeat 2 53 0 1 1181 341 274 105 49 chr17 78127748 78128063 -17144588 - MLT1A0 LTR MaLR -3 464 3 1 1181 313 402 65 4 chr17 78128249 78128479 -17144172 - MER58B DNA MER1_type -80 261 18 1 1181 269 224 27 107 chr17 78128732 78128792 -17143859 + ID4 SINE ID 15 67 -16 1 1181 195 42 0 0 chr17 78128792 78128816 -17143835 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1181 269 224 27 107 chr17 78128816 78128830 -17143821 + ID4 SINE ID 68 83 0 1 1181 205 291 129 59 chr17 78129154 78129340 -17143311 + MIRc SINE MIR 13 211 -57 1 1181 363 23 0 0 chr17 78129502 78129546 -17143105 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 1181 322 366 25 110 chr17 78129559 78129722 -17142929 + RSINE1 SINE B4 17 165 0 1 1181 184 233 27 0 chr17 78129725 78129798 -17142853 + GA-rich Low_complexity Low_complexity 2 76 0 1 1181 30 45 0 0 chr17 78129798 78129842 -17142809 + AT_rich Low_complexity Low_complexity 1 44 0 1 1181 296 295 13 0 chr17 78130500 78130578 -17142073 + ID4_ SINE ID 5 83 0 1 1181 543 69 0 0 chr17 78130582 78130654 -17141997 + (TG)n Simple_repeat Simple_repeat 2 73 0 1 1181 299 85 21 0 chr17 78130700 78130747 -17141904 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 1 1181 1113 92 0 0 chr17 78131579 78131720 -17140931 + B1_Mm SINE Alu 1 141 -6 1 1181 894 81 0 0 chr17 78131732 78131856 -17140795 + (GGGAA)n Simple_repeat Simple_repeat 3 126 0 1 1181 1140 124 0 0 chr17 78131864 78132042 -17140609 + (GGAGA)n Simple_repeat Simple_repeat 3 180 0 1 1181 308 370 38 13 chr17 78133160 78133319 -17139332 + MTEa LTR MaLR 207 369 -10 2 1181 657 272 128 12 chr17 78133482 78133707 -17138944 + Lx5 LINE L1 6814 7049 -9 2 1181 436 327 33 26 chr17 78133842 78133993 -17138658 + MER5B DNA MER1_type 27 178 0 2 1181 470 319 66 6 chr17 78136333 78136516 -17136135 + MER58A DNA MER1_type 30 223 -1 2 1181 849 158 0 0 chr17 78137565 78137742 -17134909 + GA-rich Low_complexity Low_complexity 1 177 0 2 1181 879 124 0 0 chr17 78137762 78137973 -17134678 + (GAA)n Simple_repeat Simple_repeat 1 211 0 2 1181 416 178 0 9 chr17 78137973 78138081 -17134570 + GA-rich Low_complexity Low_complexity 1 107 0 2 1181 1818 216 81 40 chr17 78138126 78138598 -17134053 + RMER1C Other Other 834 1324 -18 2 1181 371 323 100 17 chr17 78140154 78140393 -17132258 - MER110A LTR ERV1 -100 368 110 2 1181 195 325 74 33 chr17 78140407 78140528 -17132123 + MIRb SINE MIR 72 201 -67 2 1181 3321 33 0 2 chr17 78140776 78141173 -17131478 - L1Md_F2 LINE L1 -600 5982 5587 2 1181 4271 60 0 20 chr17 78141195 78141754 -17130897 + L1Md_F2 LINE L1 6018 6565 -17 2 1181 33163 78 16 3 chr17 78141796 78144803 -17127848 - L1Md_F2 LINE L1 -2 6580 3486 2 1181 228 35 0 0 chr17 78144803 78144832 -17127819 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1181 33163 90 33 2 chr17 78144832 78147901 -17124750 - L1Md_F2 LINE L1 -2398 3485 371 2 1181 309 348 71 20 chr17 78148057 78148335 -17124316 + MER89 LTR ERV1 1 391 -168 2 1181 540 0 0 0 chr17 78148344 78148404 -17124247 + (TC)n Simple_repeat Simple_repeat 1 60 0 2 1181 279 233 0 16 chr17 78148419 78148480 -17124171 + MER89 LTR ERV1 486 545 -14 2 1181 678 275 0 14 chr17 78149474 78149618 -17123033 - RSINE1 SINE B4 0 165 24 2 1181 1517 54 0 0 chr17 78150203 78150387 -17122264 + B2_Mm1t SINE B2 1 184 -9 2 1181 1625 26 0 20 chr17 78151765 78151961 -17120690 + B2_Mm1t SINE B2 2 193 0 2 1181 23 0 0 0 chr17 78152261 78152284 -17120367 + AT_rich Low_complexity Low_complexity 1 23 0 2 1181 402 355 51 66 chr17 78153171 78153503 -17119148 + MLT2B4 LTR ERVL 18 344 -70 2 1181 217 232 18 18 chr17 78153505 78153562 -17119089 + (TA)n Simple_repeat Simple_repeat 1 57 0 2 1181 394 337 114 34 chr17 78153603 78153953 -17118698 + L2 LINE L2 2259 2636 -783 2 1181 1089 275 72 45 chr17 78154130 78154614 -17118037 + Charlie1a DNA MER1_type 409 905 -550 2 1181 283 327 12 36 chr17 78154752 78154920 -17117731 + L1MA4 LINE L1 5769 5932 -368 2 1181 350 327 46 46 chr17 78155899 78156136 -17116515 - L1MC LINE L1 -833 5500 5264 2 1181 453 36 0 0 chr17 78156223 78156278 -17116373 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1181 4495 57 0 0 chr17 78156391 78156949 -17115702 - L1_Mus1 LINE L1 0 6567 6010 2 1181 252 340 30 30 chr17 78157025 78157228 -17115423 + L1MC4a LINE L1 7543 7745 -137 2 1181 21 36 0 0 chr17 78157287 78157315 -17115336 + AT_rich Low_complexity Low_complexity 1 28 0 2 1181 1460 209 47 3 chr17 78158220 78158517 -17114134 + RLTR15 LTR ERVK 50 359 0 2 1181 2148 91 40 7 chr17 78158644 78158943 -17113708 - RLTR27 LTR ERVK 0 309 1 2 1181 1395 192 0 22 chr17 78158943 78159210 -17113441 - MMERVK10C-int LTR ERVK 0 7581 7321 2 1181 288 303 31 31 chr17 78159353 78159513 -17113138 - MMERVK10C-int LTR ERVK -515 7066 6907 2 1181 4451 315 25 37 chr17 78159568 78162378 -17110273 - MMERVK10C-int LTR ERVK -4008 3672 855 2 1181 245 257 0 54 chr17 78162460 78162534 -17110117 + CT-rich Low_complexity Low_complexity 1 70 0 2 1181 336 228 0 32 chr17 78162538 78162633 -17110018 - MMERVK10C-int LTR ERVK -1143 844 753 2 1181 402 29 7 0 chr17 78162730 78162783 -17109868 - MMERVK10C-int LTR ERVK -7314 267 163 2 1181 254 170 19 19 chr17 78162754 78162808 -17109843 - MMERVK10C-int LTR ERVK -1633 354 301 2 1181 2093 112 13 22 chr17 78162808 78163120 -17109531 - RLTR27 LTR ERVK 0 309 1 2 1181 438 339 83 55 chr17 78163336 78163626 -17109025 + MLT1A0 LTR MaLR 68 365 0 2 1181 203 130 0 100 chr17 78163627 78163687 -17108964 + T-rich Low_complexity Low_complexity 1 54 0 2 1181 261 83 0 0 chr17 78163698 78163734 -17108917 + (T)n Simple_repeat Simple_repeat 1 36 0 2 1181 14296 164 43 25 chr17 78163805 78166176 -17106475 - Lx4B LINE L1 -29 7029 4661 2 1181 249 33 0 0 chr17 78166176 78166206 -17106445 + (TGG)n Simple_repeat Simple_repeat 1 30 0 2 1181 14296 159 56 35 chr17 78166206 78168718 -17103933 - Lx4B LINE L1 -1217 4660 2057 2 1181 253 309 25 0 chr17 78169062 78169143 -17103508 - L1MEg LINE L1 -4596 1604 1522 2 1181 323 306 154 22 chr17 78169154 78169381 -17103270 - L1MEg LINE L1 -4678 1522 1266 2 1181 687 294 107 43 chr17 78169821 78170380 -17102271 - Lx8 LINE L1 -9 7464 6870 2 1181 239 164 0 35 chr17 78170395 78170452 -17102199 + (CATATA)n Simple_repeat Simple_repeat 5 59 0 2 1181 653 343 73 69 chr17 78170809 78171231 -17101420 + Lx8 LINE L1 6443 6836 -637 2 1181 4039 60 6 13 chr17 78171231 78171752 -17100899 - L1Md_F2 LINE L1 0 6582 6066 2 1181 653 343 73 69 chr17 78171752 78172009 -17100642 + Lx8 LINE L1 6837 7124 -349 2 1181 498 303 64 70 chr17 78172081 78172359 -17100292 - B4 SINE B4 -1 291 33 2 1181 321 359 115 35 chr17 78173036 78173322 -17099329 - LTR16C LTR ERVL 0 489 181 2 1181 5020 42 5 7 chr17 78173446 78174065 -17098586 + L1Md_F3 LINE L1 5966 6583 -1 2 1181 2285 82 0 0 chr17 78174481 78174774 -17097877 - L1_Mus2 LINE L1 -1 6565 6273 2 1181 3273 71 0 19 chr17 78174888 78175370 -17097281 + IAPEz-int LTR ERVK 211 662 -5819 2 1181 41005 36 9 3 chr17 78175370 78180466 -17092185 + IAPEz-int LTR ERVK 1359 6481 0 2 1181 2740 37 0 60 chr17 78180466 78180814 -17091837 + IAPLTR2b LTR ERVK 1 327 0 2 1181 305 302 28 0 chr17 78180840 78180946 -17091705 + RMER12 LTR ERVK 738 846 -476 2 1181 438 20 0 0 chr17 78180960 78181011 -17091640 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1181 3087 241 71 42 chr17 78182208 78183043 -17089608 - RMER13B LTR ERVK -1 859 1 2 1181 7107 108 14 12 chr17 78183123 78184649 -17088002 + L1VL4 LINE L1 530 2058 -1501 2 1181 407 260 0 0 chr17 78184641 78184737 -17087914 + L1_Mur1 LINE L1 222 317 -6667 2 1181 6223 116 52 5 chr17 78184787 78186277 -17086374 + L1_Mur1 LINE L1 676 2235 -3651 2 1181 5188 112 17 0 chr17 78186278 78187219 -17085432 - L1_Mus3 LINE L1 -668 5970 5020 2 1181 26 0 0 0 chr17 78187987 78188013 -17084638 + AT_rich Low_complexity Low_complexity 1 26 0 2 1181 6980 132 78 2 chr17 78188020 78189385 -17083266 - Lx3C LINE L1 -2 6974 5493 2 1181 538 366 26 15 chr17 78189823 78190092 -17082559 + B4A SINE B4 3 274 -18 2 1181 294 337 0 0 chr17 78190245 78190334 -17082317 + (TATG)n Simple_repeat Simple_repeat 4 92 0 2 1181 907 304 42 30 chr17 78190334 78190901 -17081750 - L1MA6 LINE L1 -114 6186 5613 2 1181 275 283 0 0 chr17 78190928 78190981 -17081670 - tRNA-Ala-GCY_ tRNA tRNA -18 57 5 2 1181 455 261 114 25 chr17 78190994 78191463 -17081188 - L1MA6 LINE L1 -718 5594 5080 2 1181 4613 174 29 10 chr17 78192918 78193793 -17078858 + RMER17B LTR ERVK 39 929 -29 2 1181 882 258 35 12 chr17 78193812 78194067 -17078584 - Lx9 LINE L1 -317 7327 7067 2 1181 342 0 0 0 chr17 78194117 78194155 -17078496 + (TAGA)n Simple_repeat Simple_repeat 2 39 0 2 1181 21 0 0 0 chr17 78194161 78194182 -17078469 + AT_rich Low_complexity Low_complexity 1 21 0 2 1181 285 29 0 0 chr17 78194183 78194217 -17078434 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 1181 1537 245 48 109 chr17 78194300 78194459 -17078192 + RLTR20A LTR ERVK 20 178 -382 2 1181 1141 95 0 0 chr17 78194459 78194607 -17078044 + B1_Mus1 SINE Alu 1 148 0 2 1181 1537 222 44 105 chr17 78194607 78195015 -17077636 + RLTR20A LTR ERVK 167 537 -4 2 1181 1169 281 60 40 chr17 78195024 78195139 -17077512 + Lx9 LINE L1 6660 6788 -856 2 1181 333 0 0 0 chr17 78195139 78195176 -17077475 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 1181 1169 281 60 40 chr17 78195176 78195564 -17077087 + Lx9 LINE L1 6789 7173 -471 2 1181 2243 239 21 95 chr17 78195624 78196277 -17076374 - RMER19C LTR ERVK -6 605 1 2 1181 389 299 0 16 chr17 78196282 78196411 -17076240 + Lx9 LINE L1 7261 7387 -257 2 1181 3246 28 2 42 chr17 78196511 78196915 -17075736 + RLTR10 LTR ERVK 1 388 -2 2 1181 7681 29 11 2 chr17 78196927 78197877 -17074774 + RLTR10-int LTR ERVK 41 998 -989 2 1181 324 271 31 8 chr17 78197941 78198071 -17074580 + RLTR10-int LTR ERVK 1462 1594 -5987 2 1181 8345 22 0 0 chr17 78198153 78199148 -17073503 + RLTR10-int LTR ERVK 990 1984 -3 2 1181 3343 23 3 5 chr17 78199150 78199539 -17073112 + RLTR10 LTR ERVK 1 388 -2 2 1181 738 205 151 10 chr17 78199542 78199734 -17072917 - URR1B DNA MER1_type -6 219 1 2 1181 1136 69 7 0 chr17 78200085 78200230 -17072421 + B1_Mm SINE Alu 2 147 0 2 1181 254 50 25 0 chr17 78200234 78200274 -17072377 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 2 1181 353 247 62 67 chr17 78200274 78200452 -17072199 + MER53 DNA hAT 17 193 0 2 1181 290 171 0 14 chr17 78201172 78201243 -17071408 + L1_Mus1 LINE L1 629 698 -5918 2 1181 23 0 0 0 chr17 78201280 78201303 -17071348 + AT_rich Low_complexity Low_complexity 1 23 0 2 1181 11036 87 2 4 chr17 78201364 78203793 -17068858 + L1_Mus1 LINE L1 4142 6567 0 2 1181 855 103 0 20 chr17 78204815 78204964 -17067687 + (GGAA)n Simple_repeat Simple_repeat 3 148 0 2 1181 546 43 0 0 chr17 78205260 78205329 -17067322 + (GA)n Simple_repeat Simple_repeat 1 69 0 2 1181 1692 123 0 82 chr17 78205367 78205660 -17066991 + ORR1A2 LTR MaLR 1 269 -58 2 1181 486 145 1 12 chr17 78206232 78206333 -17066318 + Lx3B LINE L1 6781 6898 -111 2 1181 30 0 0 0 chr17 78207212 78207242 -17065409 + AT_rich Low_complexity Low_complexity 1 30 0 2 1181 1563 187 92 3 chr17 78207972 78208331 -17064320 - Lx7 LINE L1 -653 5227 4837 2 1181 2624 232 72 40 chr17 78208332 78209579 -17063072 + Lx7 LINE L1 5214 6514 -1182 2 1181 1226 249 45 3 chr17 78209614 78209928 -17062723 - Lx7 LINE L1 -581 7115 6789 2 1181 1509 219 36 86 chr17 78209923 78210471 -17062180 + Lx7 LINE L1 7174 7694 -2 2 1181 814 202 208 0 chr17 78210476 78210654 -17061997 - B3 SINE B2 -1 215 1 2 1181 772 178 33 0 chr17 78210809 78210961 -17061690 - ORR1C1 LTR MaLR -221 157 1 2 1181 286 316 52 22 chr17 78210980 78211116 -17061535 + MIRb SINE MIR 112 251 -17 2 1181 2592 217 74 13 chr17 78212664 78213235 -17059416 + RMER1A Other Other 161 865 -165 2 1181 204 40 0 0 chr17 78213235 78213260 -17059391 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 2 1181 2592 190 83 10 chr17 78213260 78213380 -17059271 + RMER1A Other Other 866 1028 -2 2 1181 2329 148 10 17 chr17 78213494 78213901 -17058750 + Lx2 LINE L1 6594 6997 0 2 1181 532 303 74 19 chr17 78214438 78214859 -17057792 - L1MB7 LINE L1 -21 6163 5720 2 1181 374 306 57 151 chr17 78214859 78215071 -17057580 + B3A SINE B2 5 196 -2 2 1181 1218 94 0 0 chr17 78215252 78215444 -17057207 - L1_Mm LINE L1 -4387 1496 1305 2 1181 2644 62 0 3 chr17 78215444 78215782 -17056869 + L1_Mus2 LINE L1 6229 6565 -1 2 1181 375 294 69 7 chr17 78215798 78215942 -17056709 + Lx7 LINE L1 6133 6285 -1411 2 1181 1901 268 136 10 chr17 78215955 78216668 -17055983 + Lx7 LINE L1 6535 7337 -359 2 1181 219 139 0 0 chr17 78216751 78216787 -17055864 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 1181 25 75 0 0 chr17 78216858 78216911 -17055740 + AT_rich Low_complexity Low_complexity 1 53 0 2 1181 402 115 0 0 chr17 78216921 78216982 -17055669 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 1181 405 0 0 0 chr17 78217001 78217046 -17055605 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1181 672 320 85 18 chr17 78217279 78217727 -17054924 - L1MB7 LINE L1 -1377 4769 4292 2 1181 1208 54 0 0 chr17 78217863 78218010 -17054641 - B1_Mus2 SINE Alu 0 147 1 3 1181 316 313 66 7 chr17 78218736 78218887 -17053764 - HAL1 LINE L1 -1016 1491 1332 3 1181 667 310 37 61 chr17 78220073 78220339 -17052312 + B4A SINE B4 4 269 -23 3 1181 468 105 0 0 chr17 78220339 78220415 -17052236 + (CA)n Simple_repeat Simple_repeat 2 77 0 3 1181 667 310 37 61 chr17 78220415 78220443 -17052208 + B4A SINE B4 270 291 -1 3 1181 1668 203 28 0 chr17 78220595 78220959 -17051692 - RMER1B Other Other -3 1063 690 3 1181 244 270 0 13 chr17 78221473 78221548 -17051103 + (TG)n Simple_repeat Simple_repeat 1 74 0 3 1181 679 293 11 11 chr17 78221937 78222120 -17050531 - B3A SINE B2 -15 183 1 3 1181 1573 152 52 12 chr17 78222129 78222456 -17050195 - Lx9 LINE L1 -4 7640 7301 3 1181 315 0 0 0 chr17 78223024 78223059 -17049592 + (CTAA)n Simple_repeat Simple_repeat 4 38 0 3 1181 573 324 79 64 chr17 78223282 78223549 -17049102 - B4 SINE B4 -16 276 6 3 1181 693 283 63 39 chr17 78223590 78223796 -17048855 - ID_B1 SINE B4 -2 222 12 3 1181 69 51 0 28 chr17 78223916 78224057 -17048594 + AT_rich Low_complexity Low_complexity 1 137 0 3 1181 208 121 0 0 chr17 78224233 78224266 -17048385 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1181 601 233 179 51 chr17 78224319 78224554 -17048097 + RLTR10A LTR ERVK 147 411 0 3 1181 791 268 118 16 chr17 78226382 78226636 -17046015 + B4 SINE B4 1 280 -12 3 1181 243 0 0 0 chr17 78226698 78226725 -17045926 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1181 33822 35 0 0 chr17 78228399 78233942 -17038709 + L1Md_T LINE L1 1 5589 -297 3 1181 9034 5 0 0 chr17 78233942 78234938 -17037713 + L1Md_T LINE L1 5590 6585 0 3 1181 351 0 0 0 chr17 78235698 78235737 -17036914 + (TTTG)n Simple_repeat Simple_repeat 3 41 0 3 1181 2029 44 0 12 chr17 78235988 78236239 -17036412 + L1Md_F2 LINE L1 6321 6568 -14 3 1181 718 270 68 11 chr17 78236677 78236853 -17035798 + ID_B1 SINE B4 30 215 -9 3 1181 315 0 0 0 chr17 78237032 78237067 -17035584 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 3 1181 636 77 0 0 chr17 78237773 78237864 -17034787 + (CA)n Simple_repeat Simple_repeat 2 92 0 3 1181 483 324 43 10 chr17 78238102 78238311 -17034340 + B3 SINE B2 1 216 0 3 1181 428 332 121 75 chr17 78238331 78238679 -17033972 - MLT1D LTR MaLR -60 445 82 3 1181 21199 15 1 0 chr17 78238891 78241461 -17031190 + L1Md_A LINE L1 3015 5586 -297 3 1181 8538 28 0 0 chr17 78241461 78242455 -17030196 + L1Md_A LINE L1 5587 6580 -2 3 1181 531 56 0 0 chr17 78242906 78242977 -17029674 + (GGGA)n Simple_repeat Simple_repeat 4 74 0 3 1181 324 0 0 0 chr17 78243771 78243807 -17028844 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1181 360 0 0 0 chr17 78243807 78243846 -17028805 + (GA)n Simple_repeat Simple_repeat 2 41 0 3 1181 604 341 45 62 chr17 78244283 78244571 -17028080 - B4A SINE B4 -4 288 6 3 1181 242 164 18 0 chr17 78244630 78244685 -17027966 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 1181 251 273 149 11 chr17 78244685 78244859 -17027792 + Charlie5 DNA MER1_type 2394 2591 -33 3 1181 1865 255 129 36 chr17 78245416 78246137 -17026514 - Lx2 LINE L1 0 6997 6210 3 1181 457 314 7 41 chr17 78246482 78246628 -17026023 + MER2B DNA MER2_type 196 336 0 3 1181 365 20 41 0 chr17 78246678 78246727 -17025924 + (TTTTA)n Simple_repeat Simple_repeat 5 55 0 3 1181 281 286 14 41 chr17 78246813 78246886 -17025765 + ID4_ SINE ID 2 72 -11 3 1181 188 354 15 0 chr17 78246994 78247059 -17025592 + L2 LINE L2 2678 2743 -676 3 1181 459 206 11 11 chr17 78247730 78247823 -17024828 + B3 SINE B2 1 93 -123 3 1181 24 0 0 0 chr17 78247862 78247886 -17024765 + AT_rich Low_complexity Low_complexity 1 24 0 3 1182 2558 116 39 7 chr17 78250544 78250952 -17021699 - BGLII LTR ERVK 0 421 1 3 1182 477 0 0 0 chr17 78251112 78251165 -17021486 + (GA)n Simple_repeat Simple_repeat 1 53 0 3 1182 5364 129 11 1 chr17 78251405 78252215 -17020436 - Lx2 LINE L1 0 6997 6180 3 1182 374 285 30 143 chr17 78252560 78252581 -17020070 + B4 SINE B4 75 76 -216 3 1182 683 264 0 0 chr17 78252581 78252729 -17019922 + B1_Mur1 SINE Alu 1 148 -1 3 1182 25 31 0 0 chr17 78252876 78252908 -17019743 + AT_rich Low_complexity Low_complexity 1 32 0 3 1182 1113 281 17 24 chr17 78253025 78253313 -17019338 - B4A SINE B4 0 292 7 3 1182 255 226 0 0 chr17 78253553 78253615 -17019036 + L1ME3B LINE L1 6096 6157 -83 3 1182 216 191 0 21 chr17 78253852 78253900 -17018751 + GA-rich Low_complexity Low_complexity 1 47 0 3 1182 279 224 107 44 chr17 78254161 78254320 -17018331 - Lx9 LINE L1 -15 7629 7461 3 1182 711 0 0 0 chr17 78255090 78255169 -17017482 + (GA)n Simple_repeat Simple_repeat 2 80 0 3 1182 266 222 0 87 chr17 78255386 78255455 -17017196 - ID4_ SINE ID -20 63 1 3 1182 1389 38 0 0 chr17 78255460 78255748 -17016903 + (TG)n Simple_repeat Simple_repeat 1 288 0 3 1182 255 250 114 53 chr17 78256188 78256319 -17016332 - Tigger15a DNA TcMar -86 629 491 3 1182 367 311 139 10 chr17 78256391 78256599 -17016052 + MER96B DNA hAT 3 237 -180 3 1182 369 0 0 0 chr17 78257724 78257765 -17014886 + (A)n Simple_repeat Simple_repeat 1 41 0 3 1182 317 336 49 7 chr17 78258142 78258286 -17014365 + L1M4 LINE L1 2645 2794 -3352 3 1182 207 0 0 0 chr17 78258297 78258320 -17014331 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1182 769 113 14 0 chr17 78258336 78258477 -17014174 + (TTGG)n Simple_repeat Simple_repeat 3 145 0 3 1182 535 164 51 68 chr17 78258500 78258618 -17014033 - PB1D9 SINE Alu 0 120 5 3 1182 249 362 109 51 chr17 78258886 78259160 -17013491 + MER102a DNA MER1_type 30 319 -11 3 1182 601 123 19 0 chr17 78259272 78259378 -17013273 + (TA)n Simple_repeat Simple_repeat 1 108 0 3 1182 235 304 14 14 chr17 78259380 78259450 -17013201 - MIR SINE MIR -17 245 176 3 1182 289 247 11 33 chr17 78260985 78261077 -17011574 - Lx8 LINE L1 -181 7292 7203 3 1182 491 254 80 40 chr17 78261087 78261288 -17011363 - Lx8 LINE L1 -375 7098 6890 3 1182 378 91 0 0 chr17 78261525 78261580 -17011071 + (TGG)n Simple_repeat Simple_repeat 1 55 0 3 1182 632 345 48 37 chr17 78261707 78262002 -17010649 - MLT2B1 LTR ERVL -220 300 3 3 1182 228 129 164 41 chr17 78262226 78262299 -17010352 - Lx3C LINE L1 -2 6974 6893 3 1182 1203 273 93 3 chr17 78262976 78263288 -17009363 - MTD LTR MaLR -67 352 13 3 1182 430 232 32 1 chr17 78263429 78263570 -17009081 - Lx6 LINE L1 -16 7680 7560 3 1182 3985 59 0 2 chr17 78263569 78264082 -17008569 - L1Md_F3 LINE L1 -35 5848 5337 3 1182 5733 45 1 1 chr17 78264082 78264841 -17007810 + L1Md_F3 LINE L1 5876 6584 0 3 1182 6552 229 43 25 chr17 78264853 78264878 -17007773 - Lx6 LINE L1 -179 7281 7257 3 1182 252 0 0 0 chr17 78264878 78264906 -17007745 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1182 6552 229 43 25 chr17 78264906 78265926 -17006725 - Lx6 LINE L1 -204 7256 6209 3 1182 897 69 0 0 chr17 78265926 78266056 -17006595 + (TG)n Simple_repeat Simple_repeat 2 131 0 3 1182 6552 229 43 25 chr17 78266056 78266503 -17006148 - Lx6 LINE L1 -1252 6208 5744 3 1182 2857 125 0 11 chr17 78266503 78266940 -17005711 - Lx2 LINE L1 -2 6995 6564 3 1182 6552 186 5 30 chr17 78266940 78267407 -17005244 - Lx6 LINE L1 -1717 5743 5286 3 1182 1069 123 6 6 chr17 78268939 78269119 -17003532 + (TTC)n Simple_repeat Simple_repeat 1 180 0 3 1182 2037 174 71 3 chr17 78269119 78269487 -17003164 - Lx4A LINE L1 0 7058 6666 3 1182 1548 257 18 75 chr17 78269488 78270115 -17002536 + Lx9 LINE L1 6897 7487 -157 3 1182 186 43 0 0 chr17 78270221 78270244 -17002407 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 3 1182 3149 204 120 11 chr17 78270272 78271558 -17001093 - Lx5 LINE L1 0 7050 5654 3 1182 29 70 0 0 chr17 78271661 78271718 -17000933 + AT_rich Low_complexity Low_complexity 1 57 0 3 1182 347 41 20 0 chr17 78272060 78272109 -17000542 + (TTTG)n Simple_repeat Simple_repeat 2 51 0 3 1182 1123 74 0 13 chr17 78272113 78272263 -17000388 - B1_Mus1 SINE Alu 0 148 1 3 1182 432 0 0 0 chr17 78273078 78273126 -16999525 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1182 23 0 0 0 chr17 78273730 78273753 -16998898 + AT_rich Low_complexity Low_complexity 1 23 0 3 1182 294 148 0 0 chr17 78277329 78277383 -16995268 + (TC)n Simple_repeat Simple_repeat 2 55 0 3 1182 245 288 48 0 chr17 78278383 78278508 -16994143 + L1MC3 LINE L1 7654 7784 -1 3 1182 242 354 21 78 chr17 78278946 78279087 -16993564 + MLT1A LTR MaLR 1 133 -241 3 1182 198 0 0 0 chr17 78280498 78280520 -16992131 + (TAA)n Simple_repeat Simple_repeat 2 23 0 3 1182 209 100 0 48 chr17 78282637 78282679 -16989972 + (CCCCCA)n Simple_repeat Simple_repeat 3 42 0 3 1182 353 274 57 57 chr17 78282817 78282941 -16989710 - RSINE1 SINE B4 -34 131 8 3 1182 263 102 0 48 chr17 78283012 78283074 -16989577 + T-rich Low_complexity Low_complexity 1 59 0 3 1182 249 57 0 0 chr17 78283248 78283283 -16989368 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1182 28 48 0 0 chr17 78283288 78283330 -16989321 + AT_rich Low_complexity Low_complexity 1 42 0 3 1182 180 77 0 0 chr17 78283597 78283623 -16989028 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 1182 1082 155 85 28 chr17 78283785 78283997 -16988654 + URR1A DNA MER1_type 3 226 0 3 1182 23 0 0 0 chr17 78285418 78285441 -16987210 + AT_rich Low_complexity Low_complexity 1 23 0 3 1182 27 29 0 0 chr17 78285485 78285519 -16987132 + AT_rich Low_complexity Low_complexity 1 34 0 3 1182 504 0 0 0 chr17 78286905 78286961 -16985690 + (TAA)n Simple_repeat Simple_repeat 2 57 0 3 1182 264 59 0 0 chr17 78288422 78288456 -16984195 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 1182 258 227 5 114 chr17 78289885 78290069 -16982582 + Lx7 LINE L1 7461 7624 -72 3 1182 369 109 0 0 chr17 78290088 78290143 -16982508 + (GA)n Simple_repeat Simple_repeat 2 56 0 3 1182 911 262 10 0 chr17 78290316 78290522 -16982129 + B3 SINE B2 1 208 -8 3 1182 440 250 48 7 chr17 78292612 78292757 -16979894 + Lx9 LINE L1 7196 7346 -298 3 1182 479 246 109 10 chr17 78292774 78292975 -16979676 + Lx9 LINE L1 7389 7609 -35 3 1182 366 23 0 0 chr17 78293271 78293314 -16979337 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1182 801 134 28 7 chr17 78293315 78293602 -16979049 + (CAGAGA)n Simple_repeat Simple_repeat 1 293 0 4 1182 309 41 375 21 chr17 78293943 78294039 -16978612 - B2_Mm2 SINE B2 -6 189 60 4 1182 4706 24 4 0 chr17 78294039 78294580 -16978071 - L1Md_F3 LINE L1 -1 6583 6041 4 1182 3067 26 0 0 chr17 78294580 78294958 -16977693 + L1Md_F3 LINE L1 5684 6061 -523 4 1182 1148 110 6 0 chr17 78295068 78295232 -16977419 - B2_Mm1t SINE B2 -28 165 1 4 1182 885 269 46 12 chr17 78296349 78296831 -16975820 + L1_Rod LINE L1 922 1425 -4422 4 1182 909 237 43 20 chr17 78296882 78297183 -16975468 + L1_Rod LINE L1 4556 4863 -984 4 1182 258 234 0 15 chr17 78297195 78297260 -16975391 + L1_Rod LINE L1 4969 5032 -815 4 1182 840 89 0 0 chr17 78297273 78297396 -16975255 + (GGA)n Simple_repeat Simple_repeat 2 124 0 4 1182 180 0 0 0 chr17 78298226 78298246 -16974405 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 4 1182 213 65 0 0 chr17 78298470 78298501 -16974150 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1182 1006 229 10 0 chr17 78298711 78298912 -16973739 + B3 SINE B2 4 206 -10 4 1182 22 0 0 0 chr17 78299376 78299398 -16973253 + AT_rich Low_complexity Low_complexity 1 22 0 4 1182 248 93 47 0 chr17 78299582 78299625 -16973026 + (CATA)n Simple_repeat Simple_repeat 2 46 0 4 1182 807 290 28 0 chr17 78300933 78301147 -16971504 - ID_B1 SINE B4 -4 220 1 4 1182 393 314 62 19 chr17 78301964 78302172 -16970479 - Lx8 LINE L1 -1 7472 7256 4 1182 2617 169 114 9 chr17 78302189 78302752 -16969899 + RMER1B Other Other 243 1064 -2 4 1182 222 345 33 25 chr17 78302766 78302888 -16969763 + B2_Mm2 SINE B2 32 154 -41 4 1182 350 354 71 0 chr17 78302888 78303100 -16969551 - Lx8 LINE L1 -394 7079 6853 4 1182 198 208 0 0 chr17 78304741 78304789 -16967862 + (TAA)n Simple_repeat Simple_repeat 1 48 0 4 1182 356 293 0 12 chr17 78305507 78305590 -16967061 - ID_B1 SINE B4 -1 223 142 4 1182 414 0 0 0 chr17 78305651 78305697 -16966954 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1182 260 139 83 0 chr17 78305725 78305797 -16966854 + (TCTA)n Simple_repeat Simple_repeat 2 79 0 4 1182 228 274 39 10 chr17 78306768 78306871 -16965780 - L1MC4 LINE L1 -197 7845 7740 4 1182 359 239 18 9 chr17 78306910 78307020 -16965631 - L1MC4 LINE L1 -394 7648 7538 4 1182 3503 241 16 24 chr17 78307437 78308273 -16964378 + Lx5 LINE L1 6221 7049 -1 4 1182 310 340 110 55 chr17 78308274 78308492 -16964159 + L2 LINE L2 2636 2865 -554 4 1182 655 302 37 63 chr17 78309379 78309648 -16963003 + MTEb LTR MaLR 1 262 -117 4 1182 2988 45 8 18 chr17 78310026 78310409 -16962242 + L1Md_F2 LINE L1 6202 6580 -2 4 1182 281 342 73 7 chr17 78310753 78310903 -16961748 + MIRb SINE MIR 109 268 0 4 1182 250 387 49 0 chr17 78310967 78311109 -16961542 + MIRc SINE MIR 14 162 -106 4 1182 26 30 0 0 chr17 78311363 78311396 -16961255 + AT_rich Low_complexity Low_complexity 1 33 0 4 1182 2101 220 50 42 chr17 78311830 78312408 -16960243 + RLTR31A_Mm LTR ERVK 2 584 0 4 1182 406 319 44 13 chr17 78312696 78312855 -16959796 - MIRb SINE MIR -8 260 97 4 1182 422 259 82 0 chr17 78313666 78313801 -16958850 + MER53 DNA hAT 1 146 -47 4 1182 937 247 76 9 chr17 78314349 78314598 -16958053 + Lx9 LINE L1 6645 6907 -737 4 1182 2598 75 0 0 chr17 78314598 78314930 -16957721 + IAPEY3_LTR LTR ERVK 1 332 0 4 1182 937 247 76 9 chr17 78314930 78314995 -16957656 + Lx9 LINE L1 6908 6979 -665 4 1182 1418 192 202 20 chr17 78314995 78315346 -16957305 - MTD LTR MaLR 0 419 5 4 1182 213 177 16 16 chr17 78316591 78316654 -16955997 + (TTTG)n Simple_repeat Simple_repeat 1 63 0 4 1182 237 341 0 39 chr17 78317310 78317438 -16955213 + GA-rich Low_complexity Low_complexity 2 124 0 4 1182 336 280 48 102 chr17 78317443 78317574 -16955077 + HAL1-3A_ME LINE L1 2281 2399 -459 4 1182 954 122 0 33 chr17 78317574 78317726 -16954925 + B1_Mus1 SINE Alu 2 148 0 4 1182 336 280 48 102 chr17 78317726 78317761 -16954890 + HAL1-3A_ME LINE L1 2400 2437 -421 4 1182 226 295 0 0 chr17 78318043 78318104 -16954547 + L1M2c LINE L1 324 384 -6405 4 1182 315 71 0 0 chr17 78318581 78318623 -16954028 + (TTTTC)n Simple_repeat Simple_repeat 3 44 0 4 1182 3435 167 9 1 chr17 78319088 78319828 -16952823 + Lx2 LINE L1 4850 5854 -800 4 1182 2592 131 16 45 chr17 78319828 78320317 -16952334 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1182 4414 47 67 19 chr17 78320317 78320942 -16951709 + IAPEz-int LTR ERVK 8 662 -5819 4 1182 424 38 0 0 chr17 78320942 78320995 -16951656 + IAPEz-int LTR ERVK 1359 1411 -5070 4 1182 1718 119 4 4 chr17 78320994 78321256 -16951395 + IAPEz-int LTR ERVK 2236 2497 -5183 4 1182 886 73 24 0 chr17 78321253 78321376 -16951275 + IAPEz-int LTR ERVK 4785 4910 -2770 4 1182 25046 14 5 0 chr17 78321376 78324318 -16948333 + IAPEz-int LTR ERVK 3525 6481 0 4 1182 2600 134 12 45 chr17 78324318 78324809 -16947842 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1182 6554 137 39 9 chr17 78324809 78325925 -16946726 + Lx2 LINE L1 5849 6997 0 4 1182 297 321 71 5 chr17 78326478 78326747 -16945904 + L1M2c LINE L1 1442 1753 -5096 4 1182 472 169 0 0 chr17 78326838 78326915 -16945736 + BC1_Mm scRNA scRNA 2 78 -74 4 1182 303 341 85 8 chr17 78327202 78327332 -16945319 + HAL1-3A_ME LINE L1 2284 2423 -435 4 1182 281 329 19 19 chr17 78327344 78327502 -16945149 + L1M2c LINE L1 2086 2243 -4606 4 1182 1398 12 0 0 chr17 78328391 78328551 -16944100 + (GGGAGA)n Simple_repeat Simple_repeat 3 162 0 4 1182 30 0 0 0 chr17 78328551 78328581 -16944070 + AT_rich Low_complexity Low_complexity 1 30 0 4 1182 242 292 44 22 chr17 78328635 78328726 -16943925 + MIR3 SINE MIR 113 205 -3 4 1182 492 259 38 15 chr17 78329094 78329227 -16943424 + RMER13B LTR ERVK 5 140 -768 4 1182 2975 204 71 16 chr17 78329203 78329835 -16942816 + RMER13B LTR ERVK 242 908 0 4 1182 228 135 0 0 chr17 78331981 78332018 -16940633 + (TC)n Simple_repeat Simple_repeat 2 38 0 4 1182 1054 261 56 72 chr17 78332018 78332451 -16940200 - RLTR16 LTR ERVK -77 457 1 4 1182 1759 174 45 22 chr17 78332513 78332872 -16939779 - ORR1B2 LTR MaLR 0 367 1 4 1182 476 105 13 0 chr17 78333240 78333316 -16939335 + (TCC)n Simple_repeat Simple_repeat 1 77 0 4 1182 458 259 101 48 chr17 78333340 78333536 -16939115 - L1_Rod LINE L1 -57 5790 5613 4 1182 1999 177 62 10 chr17 78333536 78333936 -16938715 - MTC LTR MaLR 0 421 1 4 1182 458 254 44 63 chr17 78333936 78334004 -16938647 - L1_Rod LINE L1 -664 5627 5567 4 1182 288 362 37 2 chr17 78335584 78335713 -16936938 + PB1D9 SINE Alu 4 135 -14 4 1182 30 45 0 0 chr17 78336317 78336361 -16936290 + AT_rich Low_complexity Low_complexity 1 44 0 4 1182 925 333 69 18 chr17 78336425 78336661 -16935990 - Lx8 LINE L1 -127 7346 7112 4 1182 2508 44 0 28 chr17 78336661 78336987 -16935664 - L1Md_F2 LINE L1 0 6582 6266 4 1182 925 333 69 18 chr17 78336987 78337245 -16935406 - Lx8 LINE L1 -362 7111 6827 4 1182 4718 195 56 10 chr17 78337814 78339436 -16933215 + L1_Mur2 LINE L1 806 2492 -3385 4 1182 4172 103 4 9 chr17 78339427 78340119 -16932532 + MusHAL1 LINE L1 405 1093 -1619 4 1182 624 349 73 61 chr17 78340119 78340223 -16932428 + MLT2B1 LTR ERVL 104 213 -307 4 1182 575 48 12 0 chr17 78340223 78340306 -16932345 + (TAGA)n Simple_repeat Simple_repeat 3 86 0 4 1182 624 349 73 61 chr17 78340306 78340613 -16932038 + MLT2B1 LTR ERVL 214 519 -1 4 1182 377 244 78 18 chr17 78340647 78340814 -16931837 - L1MC4a LINE L1 -222 7660 7484 4 1182 272 330 30 0 chr17 78341325 78341425 -16931226 + MLT1I LTR MaLR 276 378 -33 4 1182 268 277 76 4 chr17 78342560 78342660 -16929991 + 7SLRNA srpRNA srpRNA 18 126 -1 4 1182 342 0 0 0 chr17 78342816 78342854 -16929797 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 4 1182 349 250 52 11 chr17 78342858 78342963 -16929688 - PB1D10 SINE Alu -5 115 1 4 1182 315 325 88 0 chr17 78343599 78343713 -16928938 - MER94 DNA AcHobo 0 134 11 4 1182 270 346 62 6 chr17 78343940 78344117 -16928534 + MIR SINE MIR 55 241 -21 4 1182 38 22 0 0 chr17 78344913 78344958 -16927693 + AT_rich Low_complexity Low_complexity 1 45 0 4 1182 183 222 0 0 chr17 78345004 78345049 -16927602 + (CAT)n Simple_repeat Simple_repeat 1 45 0 4 1182 279 0 0 0 chr17 78345860 78345891 -16926760 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1182 476 325 50 6 chr17 78346523 78346684 -16925967 + MLT1A0 LTR MaLR 19 186 -179 4 1182 522 0 0 0 chr17 78346804 78346862 -16925789 + (CTG)n Simple_repeat Simple_repeat 2 59 0 4 1182 242 292 141 12 chr17 78346921 78347091 -16925560 - HAL1 LINE L1 -782 1725 1534 4 1182 342 0 0 0 chr17 78348973 78349011 -16923640 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1182 4574 76 18 2 chr17 78349067 78349673 -16922978 + L1_Mus2 LINE L1 5945 6560 -6 4 1182 21 0 0 0 chr17 78350346 78350367 -16922284 + AT_rich Low_complexity Low_complexity 1 21 0 4 1182 736 287 76 31 chr17 78350484 78350801 -16921850 - MLT1A0 LTR MaLR -1 364 34 4 1182 565 261 148 6 chr17 78351248 78351410 -16921241 - B3 SINE B2 -9 186 2 4 1182 1168 131 0 15 chr17 78351595 78351797 -16920854 - L1Md_F2 LINE L1 -7 6575 6377 4 1182 183 42 0 0 chr17 78352596 78352620 -16920031 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 1182 489 285 7 62 chr17 78352625 78352771 -16919880 - B3A SINE B2 -60 138 1 4 1182 8603 4 0 0 chr17 78353122 78354153 -16918498 - L1Md_A LINE L1 0 6582 5552 4 1182 24 0 0 0 chr17 78355579 78355603 -16917048 + AT_rich Low_complexity Low_complexity 1 24 0 4 1182 1175 67 30 0 chr17 78355721 78356184 -16916467 + (TAGA)n Simple_repeat Simple_repeat 1 477 0 4 1182 24 0 0 0 chr17 78356627 78356651 -16916000 + AT_rich Low_complexity Low_complexity 1 24 0 4 1182 1137 271 92 6 chr17 78356758 78357085 -16915566 + MTEa LTR MaLR 5 359 -20 4 1182 1323 71 11 6 chr17 78357653 78357836 -16914815 + B2_Mm2 SINE B2 8 191 -4 4 1182 1157 234 84 27 chr17 78359016 78359350 -16913301 - MTEb LTR MaLR -7 372 20 4 1182 450 302 24 8 chr17 78359403 78359417 -16913234 + MTE2a LTR MaLR 43 56 -323 4 1182 2878 94 5 8 chr17 78359417 78359814 -16912837 - MTA_Mm LTR MaLR 0 396 1 4 1182 450 302 24 8 chr17 78359814 78359926 -16912725 + MTE2a LTR MaLR 57 170 -209 4 1182 837 199 28 47 chr17 78359933 78360144 -16912507 - Lx9 LINE L1 -448 7196 6990 4 1182 989 275 24 5 chr17 78361546 78361758 -16910893 + B3 SINE B2 1 216 0 4 1182 243 352 42 83 chr17 78362082 78362299 -16910352 - L2 LINE L2 -671 2748 2541 4 1182 210 250 71 143 chr17 78362344 78362456 -16910195 + PB1 SINE Alu 22 125 -2 4 1182 443 341 23 8 chr17 78362391 78362521 -16910130 + B4A SINE B4 158 289 -3 4 1182 450 263 21 0 chr17 78363176 78363271 -16909380 + Charlie9 DNA MER1_type 2661 2757 0 4 1182 1630 215 65 20 chr17 78365421 78365820 -16906831 - MTD LTR MaLR -2 417 1 5 1182 285 100 0 0 chr17 78365841 78365891 -16906760 + (TTGG)n Simple_repeat Simple_repeat 2 51 0 5 1182 414 306 102 37 chr17 78366254 78366477 -16906174 + MIRb SINE MIR 1 241 -21 5 1182 215 202 11 0 chr17 78366544 78366638 -16906013 + CT-rich Low_complexity Low_complexity 2 96 0 5 1182 542 269 68 62 chr17 78367272 78367581 -16905070 + L1M3 LINE L1 5463 5773 -395 5 1182 674 311 123 94 chr17 78367605 78367882 -16904769 + B4 SINE B4 8 292 0 5 1182 277 136 0 0 chr17 78368165 78368209 -16904442 + MTEa LTR MaLR 13 56 -323 5 1182 562 215 32 56 chr17 78368211 78368398 -16904253 - MTD LTR MaLR -7 412 177 5 1182 564 366 28 35 chr17 78368454 78368575 -16904076 - MTD LTR MaLR -149 270 156 5 1182 3034 115 55 49 chr17 78368575 78369105 -16903546 + RMER16 LTR ERVK 1 533 0 5 1182 564 366 28 35 chr17 78369105 78369238 -16903413 - MTD LTR MaLR -264 155 18 5 1182 542 290 109 36 chr17 78369250 78369443 -16903208 + MTEa LTR MaLR 48 254 -125 5 1182 261 0 0 0 chr17 78370247 78370276 -16902375 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1182 433 302 33 20 chr17 78370594 78370746 -16901905 + MER104 DNA Tc2 1 154 -27 5 1182 3287 212 47 28 chr17 78371914 78372308 -16900343 - Lx5 LINE L1 -3 7047 6644 5 1182 216 0 0 0 chr17 78372308 78372332 -16900319 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 5 1182 3287 212 47 28 chr17 78372332 78372698 -16899953 - Lx5 LINE L1 -407 6643 6272 5 1182 226 359 13 0 chr17 78372699 78372777 -16899874 - ID2 SINE ID -3 80 2 5 1182 327 104 0 0 chr17 78373225 78373273 -16899378 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 5 1182 282 96 22 98 chr17 78373273 78373365 -16899286 + T-rich Low_complexity Low_complexity 2 86 0 5 1182 22 0 0 0 chr17 78374078 78374100 -16898551 + AT_rich Low_complexity Low_complexity 1 22 0 5 1182 379 383 27 13 chr17 78374421 78374646 -16898005 + L4 LINE RTE 1678 1905 -124 5 1182 596 291 16 0 chr17 78374730 78374857 -16897794 + RSINE1 SINE B4 2 130 -35 5 1182 396 0 0 0 chr17 78374875 78374919 -16897732 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1182 1757 225 27 42 chr17 78374932 78375340 -16897311 - MTD LTR MaLR 0 419 18 5 1182 26 0 0 0 chr17 78375344 78375370 -16897281 + AT_rich Low_complexity Low_complexity 1 26 0 5 1182 490 210 8 8 chr17 78375525 78375650 -16897001 + GA-rich Low_complexity Low_complexity 4 128 0 5 1182 27 62 0 0 chr17 78375722 78375770 -16896881 + AT_rich Low_complexity Low_complexity 1 48 0 5 1182 2999 176 7 3 chr17 78375770 78376339 -16896312 + Lx5 LINE L1 5305 5875 -2 5 1182 1628 183 14 78 chr17 78376339 78376538 -16896113 + RMER17C LTR ERVK 1 179 -231 5 1182 963 127 6 11 chr17 78376538 78376713 -16895938 + (TCTCC)n Simple_repeat Simple_repeat 4 177 0 5 1182 1628 183 14 78 chr17 78376713 78376754 -16895897 + RMER17C LTR ERVK 180 216 -194 5 1182 495 48 0 0 chr17 78376754 78376816 -16895835 + (TC)n Simple_repeat Simple_repeat 2 63 0 5 1182 1628 183 14 78 chr17 78376816 78377012 -16895639 + RMER17C LTR ERVK 217 409 -1 5 1182 2508 137 4 20 chr17 78377012 78377169 -16895482 + Lx5 LINE L1 5877 6034 -1016 5 1182 2728 234 23 54 chr17 78377139 78377648 -16895003 + Lx5 LINE L1 6359 6865 -185 5 1182 1041 95 0 0 chr17 78377648 78377785 -16894866 + B1_Mus1 SINE Alu 1 137 -11 5 1182 2728 234 23 54 chr17 78377785 78377976 -16894675 + Lx5 LINE L1 6866 7037 -13 5 1182 6518 234 37 50 chr17 78377980 78379986 -16892665 + Lx7 LINE L1 5717 7696 0 5 1182 456 67 0 0 chr17 78380131 78380191 -16892460 + (GGGA)n Simple_repeat Simple_repeat 4 63 0 5 1182 910 159 169 7 chr17 78380674 78380947 -16891704 + Lx9 LINE L1 7328 7644 0 5 1183 432 265 31 39 chr17 78381132 78381368 -16891283 + L1VL1 LINE L1 45 406 -6016 5 1183 426 256 15 8 chr17 78381427 78381561 -16891090 + L1_Mus1 LINE L1 675 809 -5807 5 1183 29174 120 9 29 chr17 78381563 78385184 -16887467 + L1_Mus1 LINE L1 725 4268 -1615 5 1183 3103 51 3 0 chr17 78385184 78385575 -16887076 + L1Md_F2 LINE L1 6191 6582 0 5 1183 29174 87 7 6 chr17 78385575 78387884 -16884767 + L1_Mus1 LINE L1 4269 6654 0 5 1183 448 158 10 10 chr17 78389059 78389155 -16883496 + CT-rich Low_complexity Low_complexity 2 97 0 5 1183 558 0 0 0 chr17 78389228 78389290 -16883361 + (TG)n Simple_repeat Simple_repeat 1 62 0 5 1183 597 28 0 0 chr17 78389290 78389360 -16883291 + (GA)n Simple_repeat Simple_repeat 1 71 0 5 1183 907 269 28 69 chr17 78390173 78390461 -16882190 + B4 SINE B4 3 278 -14 5 1183 13753 165 11 3 chr17 78390640 78393334 -16879317 - L1_Mur1 LINE L1 -1498 4388 1672 5 1183 519 227 0 8 chr17 78393354 78393483 -16879168 - L1VL4 LINE L1 -5984 318 191 5 1183 193 314 110 35 chr17 78393724 78393869 -16878782 + L3 LINE CR1 707 862 -3627 5 1183 414 348 80 7 chr17 78395067 78395310 -16877341 + L1MB7 LINE L1 5643 5900 -2142 5 1183 378 0 0 0 chr17 78395310 78395352 -16877299 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1183 399 348 80 7 chr17 78395352 78395397 -16877254 + L1MB7 LINE L1 5901 5951 -2091 5 1183 405 263 44 107 chr17 78396003 78396237 -16876414 + MLT1E1 LTR MaLR 341 625 -55 5 1183 2420 88 134 0 chr17 78396217 78396613 -16876038 - RLTR47_MM LTR ERV1 -83 449 1 5 1183 407 313 60 30 chr17 78396713 78396980 -16875671 - RLTR6-int LTR ERV1 -57 7721 7447 5 1183 261 401 0 0 chr17 78397535 78397702 -16874949 - MMERGLN-int LTR ERV1 -2009 5547 5381 5 1183 1629 284 13 6 chr17 78397868 78398336 -16874315 - MuRRS4-int LTR ERV1 -1048 4015 3545 5 1183 259 239 64 64 chr17 78398714 78398808 -16873843 - MMERGLN-int LTR ERV1 -3156 4450 4357 5 1183 190 29 57 29 chr17 78398851 78398886 -16873765 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 5 1183 23 54 0 0 chr17 78399904 78399941 -16872710 + AT_rich Low_complexity Low_complexity 1 37 0 5 1183 227 79 0 26 chr17 78400101 78400140 -16872511 + (TCC)n Simple_repeat Simple_repeat 1 38 0 5 1183 474 319 14 35 chr17 78400140 78400283 -16872368 - ID_B1 SINE B4 -84 140 1 5 1183 186 43 0 0 chr17 78400347 78400370 -16872281 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1183 21 0 0 0 chr17 78400771 78400792 -16871859 + AT_rich Low_complexity Low_complexity 1 21 0 5 1183 332 321 12 0 chr17 78401350 78401431 -16871220 - ID SINE ID -142 82 1 5 1183 702 69 0 0 chr17 78401885 78401986 -16870665 + (GA)n Simple_repeat Simple_repeat 2 102 0 5 1183 424 350 37 43 chr17 78403049 78403237 -16869414 + MER20 DNA MER1_type 33 219 0 5 1183 1663 219 26 86 chr17 78404508 78404972 -16867679 - Lx5 LINE L1 -1 7049 6614 5 1183 1085 86 0 0 chr17 78406275 78406415 -16866236 - B1_Mus1 SINE Alu -8 140 1 5 1183 322 184 148 74 chr17 78406421 78406556 -16866095 - Lx7 LINE L1 -16 7680 7536 5 1183 621 260 63 44 chr17 78406744 78406949 -16865702 + B4 SINE B4 3 211 -81 5 1183 576 77 0 0 chr17 78406949 78407027 -16865624 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 5 1183 580 312 49 41 chr17 78407027 78407065 -16865586 + B4A SINE B4 213 247 -45 5 1183 267 114 0 0 chr17 78407065 78407109 -16865542 + (GA)n Simple_repeat Simple_repeat 1 44 0 5 1183 223 338 0 0 chr17 78407136 78407207 -16865444 + (CA)n Simple_repeat Simple_repeat 2 72 0 5 1183 339 354 63 63 chr17 78407353 78407576 -16865075 - L4 LINE RTE -1263 766 544 5 1183 1264 149 14 5 chr17 78408998 78409220 -16863431 - URR1B DNA MER1_type 0 225 2 5 1183 306 290 4 48 chr17 78409384 78409516 -16863135 + MIR SINE MIR 103 226 -36 5 1183 444 19 0 0 chr17 78411011 78411064 -16861587 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1183 351 0 0 0 chr17 78411202 78411241 -16861410 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1183 1029 271 14 43 chr17 78411284 78411565 -16861086 - B4 SINE B4 -16 276 4 5 1183 456 35 0 0 chr17 78412401 78412459 -16860192 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 1183 389 288 9 0 chr17 78412491 78412602 -16860049 - Lx8 LINE L1 -233 7240 7129 5 1183 306 274 207 30 chr17 78412673 78412876 -16859775 - MIRb SINE MIR -16 252 14 5 1183 787 260 0 80 chr17 78413338 78413551 -16859100 - B3A SINE B2 -1 197 2 5 1183 800 328 107 19 chr17 78414411 78414843 -16857808 - Lx8 LINE L1 -416 7057 6588 5 1183 3727 60 0 2 chr17 78414871 78415337 -16857314 + L1_Mus1 LINE L1 6103 6567 0 5 1183 1054 289 75 40 chr17 78415345 78416223 -16856428 + Lx8 LINE L1 5260 6192 -1281 5 1183 225 0 0 0 chr17 78416223 78416248 -16856403 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 1183 1036 323 92 45 chr17 78416248 78416590 -16856061 + Lx8 LINE L1 6193 6545 -928 5 1183 1039 355 121 19 chr17 78417226 78418174 -16854477 + L1M4b LINE L1 23 1067 -6267 5 1183 5147 178 59 37 chr17 78418177 78419321 -16853330 + Lx4B LINE L1 5868 7041 -17 5 1183 519 60 0 0 chr17 78419321 78419388 -16853263 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 5 1183 5147 178 59 37 chr17 78419388 78419407 -16853244 + Lx4B LINE L1 7042 7057 -1 5 1183 22 0 0 0 chr17 78419559 78419581 -16853070 + AT_rich Low_complexity Low_complexity 1 22 0 5 1183 903 182 38 57 chr17 78419581 78419791 -16852860 - MTD LTR MaLR 0 419 214 5 1183 584 300 36 62 chr17 78419793 78419964 -16852687 + Lx8 LINE L1 7167 7339 -134 5 1183 207 0 0 0 chr17 78419964 78419987 -16852664 + (CAGA)n Simple_repeat Simple_repeat 4 26 0 5 1183 584 300 36 62 chr17 78419987 78420121 -16852530 + Lx8 LINE L1 7340 7463 -10 5 1183 236 293 0 0 chr17 78420732 78420790 -16851861 + MLT2B3 LTR ERVL 14 71 -485 5 1183 620 64 11 0 chr17 78420790 78420884 -16851767 + (TG)n Simple_repeat Simple_repeat 2 96 0 5 1183 324 0 0 0 chr17 78420884 78420919 -16851732 + (TC)n Simple_repeat Simple_repeat 1 36 0 5 1183 249 57 0 0 chr17 78420920 78420955 -16851696 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1183 635 299 96 87 chr17 78421177 78421533 -16851118 - ORR1E LTR MaLR 0 359 1 5 1183 394 298 113 36 chr17 78421545 78421740 -16850911 + MLT2B3 LTR ERVL 345 554 0 5 1183 627 32 10 21 chr17 78422076 78422172 -16850479 + (TG)n Simple_repeat Simple_repeat 2 96 0 5 1183 711 258 38 91 chr17 78422181 78422390 -16850261 - B4 SINE B4 0 292 95 5 1183 267 327 45 9 chr17 78423108 78423219 -16849432 + L3b LINE CR1 12 126 -356 5 1183 186 43 0 0 chr17 78424978 78425001 -16847650 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1183 346 321 44 37 chr17 78425730 78425866 -16846785 - MER20B DNA MER1_type -384 399 263 5 1183 315 326 93 0 chr17 78426052 78426181 -16846470 - MER20B DNA MER1_type -592 191 51 5 1183 633 245 146 3 chr17 78426370 78426657 -16845994 - Lx9 LINE L1 -1 7643 7316 5 1183 1619 340 49 11 chr17 78426672 78427658 -16844993 - Lx8 LINE L1 -35 7438 6416 5 1183 499 204 32 64 chr17 78427840 78427997 -16844654 + RLTR43A LTR ERVK 210 361 -3 5 1183 219 161 35 18 chr17 78428423 78428480 -16844171 + A-rich Low_complexity Low_complexity 1 58 0 5 1183 1947 167 148 35 chr17 78428719 78429227 -16843424 + ETnERV2-int LTR ERVK 255 819 -4587 5 1183 1418 199 44 22 chr17 78429232 78429551 -16843100 + ETnERV2-int LTR ERVK 1089 1414 -3992 5 1183 5761 96 5 11 chr17 78429554 78430367 -16842284 + RLTR13C2 LTR ERVK 1 808 0 6 1183 2988 190 54 35 chr17 78430369 78431056 -16841595 + ETnERV2-int LTR ERVK 2047 2746 -4660 5 1183 2454 190 5 22 chr17 78431057 78431642 -16841009 + RMER16-int LTR ERVK 2303 2833 -2573 6 1183 2024 239 51 27 chr17 78431689 78432372 -16840279 + ETnERV2-int LTR ERVK 4083 4534 -2872 6 1183 3284 198 6 9 chr17 78432438 78433110 -16839541 + ETnERV2-int LTR ERVK 5125 5794 -1612 6 1183 763 198 37 0 chr17 78433146 78433308 -16839343 + RMER16-int LTR ERVK 3826 3993 -1413 6 1183 6707 53 1 1 chr17 78433696 78434570 -16838081 - L1Md_F2 LINE L1 -12 6570 5712 6 1183 298 294 0 0 chr17 78434631 78434716 -16837935 + ETnERV2-int LTR ERVK 6490 6574 -345 6 1183 1939 225 23 5 chr17 78434867 78435295 -16837356 + ETnERV2-int LTR ERVK 6646 7081 -325 6 1183 381 190 78 72 chr17 78435469 78435569 -16837082 + RLTR43A LTR ERVK 201 299 -65 6 1183 654 13 0 0 chr17 78435569 78435644 -16837007 + (TC)n Simple_repeat Simple_repeat 1 75 0 6 1183 381 190 78 72 chr17 78435644 78435696 -16836955 + RLTR43A LTR ERVK 300 354 -10 6 1183 1532 178 7 13 chr17 78435698 78436005 -16836646 - Lx5 LINE L1 -1000 6050 5746 6 1183 257 362 95 21 chr17 78436091 78436418 -16836233 + L2a LINE L2 3027 3377 -49 6 1183 297 0 0 0 chr17 78438018 78438051 -16834600 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 1183 837 356 40 21 chr17 78438139 78438564 -16834087 - MT2A LTR ERVL -100 433 1 6 1183 339 266 122 57 chr17 78439234 78439497 -16833154 + L1MA9 LINE L1 5946 6225 -87 6 1183 329 137 13 27 chr17 78439514 78439589 -16833062 + L1MA9 LINE L1 6261 6334 0 6 1183 495 261 73 36 chr17 78440070 78440263 -16832388 - MIR3 SINE MIR -12 196 3 6 1183 972 209 30 0 chr17 78440653 78440854 -16831797 - B3 SINE B2 -3 213 7 6 1183 210 37 0 0 chr17 78441548 78441575 -16831076 + (TTTG)n Simple_repeat Simple_repeat 4 30 0 6 1183 230 245 0 0 chr17 78441745 78441794 -16830857 + CT-rich Low_complexity Low_complexity 3 51 0 6 1183 399 290 0 0 chr17 78441794 78441894 -16830757 - PB1D10 SINE Alu -13 104 5 6 1183 18232 138 69 56 chr17 78442448 78444908 -16827743 + L1VL4 LINE L1 645 2880 -3003 6 1183 2521 164 24 0 chr17 78444908 78445334 -16827317 + Lx4A LINE L1 6622 7057 -1 6 1183 18232 124 87 69 chr17 78445334 78447309 -16825342 + L1VL4 LINE L1 2881 5145 -738 6 1183 249 331 96 96 chr17 78447845 78448002 -16824649 - ID_B1 SINE B4 -66 158 2 6 1183 391 304 10 32 chr17 78449795 78449919 -16822732 - PB1D7 SINE Alu -5 115 1 6 1183 282 377 65 34 chr17 78450747 78451071 -16821580 - Tigger11a DNA MER2_type -240 495 162 6 1183 344 340 16 31 chr17 78451839 78451963 -16820688 - B1F1 SINE Alu 0 117 1 6 1183 23 112 0 0 chr17 78452286 78452393 -16820258 + AT_rich Low_complexity Low_complexity 1 107 0 6 1183 416 330 19 0 chr17 78452418 78452524 -16820127 + RSINE1 SINE B4 18 125 -40 6 1183 224 194 32 0 chr17 78452545 78452607 -16820044 + (TAAA)n Simple_repeat Simple_repeat 4 67 0 6 1183 296 279 27 0 chr17 78452996 78453087 -16819564 - ID4 SINE ID -49 103 11 6 1183 436 324 62 18 chr17 78453740 78453935 -16818716 + MLT1B LTR MaLR 5 215 -252 6 1183 390 189 9 18 chr17 78453959 78454072 -16818579 + (CA)n Simple_repeat Simple_repeat 1 112 0 6 1183 469 311 84 11 chr17 78454074 78454253 -16818398 + MLT1B LTR MaLR 182 373 -17 6 1183 329 239 97 11 chr17 78454657 78454750 -16817901 - PB1D10 SINE Alu -16 101 1 6 1183 995 272 52 55 chr17 78454879 78455423 -16817228 + Lx7 LINE L1 7155 7696 0 6 1183 636 14 0 0 chr17 78455930 78456003 -16816648 + (TC)n Simple_repeat Simple_repeat 1 73 0 6 1183 848 101 0 8 chr17 78456082 78456212 -16816439 + (TC)n Simple_repeat Simple_repeat 2 130 0 6 1183 481 251 85 30 chr17 78456342 78456543 -16816108 + L1M2 LINE L1 4684 4895 -1248 6 1183 548 199 68 37 chr17 78456546 78456708 -16815943 + L1MA6 LINE L1 6130 6296 -4 6 1183 968 214 59 15 chr17 78456719 78456923 -16815728 + B3 SINE B2 1 213 -3 6 1183 2931 45 0 0 chr17 78457857 78458212 -16814439 + L1_Mus1 LINE L1 6213 6567 0 6 1183 30 0 0 0 chr17 78458464 78458494 -16814157 + AT_rich Low_complexity Low_complexity 1 30 0 6 1183 355 298 19 19 chr17 78458665 78458771 -16813880 + B4A SINE B4 36 141 -151 6 1183 374 284 139 35 chr17 78458806 78459036 -16813615 + Lx9 LINE L1 7102 7355 -289 6 1183 495 0 0 0 chr17 78459102 78459157 -16813494 + (TG)n Simple_repeat Simple_repeat 1 55 0 6 1183 216 0 0 0 chr17 78459157 78459180 -16813471 + (GA)n Simple_repeat Simple_repeat 1 24 0 6 1183 450 0 0 0 chr17 78459830 78459880 -16812771 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1183 21 0 0 0 chr17 78459881 78459902 -16812749 + AT_rich Low_complexity Low_complexity 1 21 0 6 1183 1067 295 131 0 chr17 78460045 78460221 -16812430 - MTEa LTR MaLR 0 379 192 6 1183 624 14 0 0 chr17 78460221 78460294 -16812357 + (TC)n Simple_repeat Simple_repeat 1 73 0 6 1183 1067 295 131 0 chr17 78460294 78460446 -16812205 - MTEa LTR MaLR -188 191 10 6 1183 21 0 0 0 chr17 78461839 78461860 -16810791 + AT_rich Low_complexity Low_complexity 1 21 0 6 1183 282 125 0 0 chr17 78461932 78461980 -16810671 + (TAG)n Simple_repeat Simple_repeat 1 48 0 6 1183 19285 73 2 8 chr17 78461980 78464710 -16807941 + L1Md_F2 LINE L1 2874 5586 -297 6 1183 8403 34 0 0 chr17 78464710 78465693 -16806958 + L1Md_F2 LINE L1 5587 6569 -13 6 1183 207 0 0 0 chr17 78465693 78465716 -16806935 + (TAG)n Simple_repeat Simple_repeat 1 23 0 6 1183 620 273 0 0 chr17 78466660 78466788 -16805863 + RSINE1 SINE B4 2 129 -36 6 1183 698 246 29 46 chr17 78467832 78468045 -16804606 + B3A SINE B2 2 204 -12 6 1183 186 43 0 0 chr17 78468456 78468479 -16804172 + (T)n Simple_repeat Simple_repeat 1 23 0 6 1183 36286 47 0 3 chr17 78468497 78475147 -16797504 - L1Md_T LINE L1 0 6585 2 6 1183 423 0 0 0 chr17 78475625 78475672 -16796979 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1183 204 278 40 27 chr17 78476761 78476835 -16795816 - MIRm SINE MIR -103 173 99 6 1183 2993 265 25 13 chr17 78476839 78477687 -16794964 + Lx8 LINE L1 6465 7322 -151 6 1183 247 242 21 21 chr17 78478461 78478554 -16794097 + (TCTG)n Simple_repeat Simple_repeat 1 93 0 6 1183 303 172 51 22 chr17 78478554 78478691 -16793960 + (TCTCTG)n Simple_repeat Simple_repeat 2 142 0 6 1183 225 0 0 0 chr17 78478704 78478729 -16793922 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 1183 435 52 0 0 chr17 78478774 78478832 -16793819 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 1183 459 0 0 0 chr17 78478832 78478882 -16793769 + (GA)n Simple_repeat Simple_repeat 2 52 0 6 1183 202 328 82 0 chr17 78479979 78480040 -16792611 - MER5A DNA MER1_type -99 90 25 6 1183 24 53 0 0 chr17 78481026 78481064 -16791587 + AT_rich Low_complexity Low_complexity 1 38 0 6 1183 1495 62 10 5 chr17 78482593 78482787 -16789864 + B2_Mm2 SINE B2 1 195 0 6 1183 1351 28 16 27 chr17 78486013 78486199 -16786452 + L1Md_F3 LINE L1 6401 6584 0 6 1183 206 312 0 15 chr17 78486443 78486508 -16786143 - L3b LINE CR1 -225 257 194 6 1183 234 0 0 0 chr17 78486702 78486728 -16785923 + (GA)n Simple_repeat Simple_repeat 1 26 0 6 1183 1539 17 0 0 chr17 78486728 78486906 -16785745 + (GGGAGA)n Simple_repeat Simple_repeat 3 180 0 6 1183 684 0 0 0 chr17 78486911 78486987 -16785664 + (GGAA)n Simple_repeat Simple_repeat 4 79 0 6 1183 834 11 0 0 chr17 78487187 78487282 -16785369 + (CAGAGA)n Simple_repeat Simple_repeat 2 96 0 6 1183 5247 37 0 2 chr17 78487963 78488588 -16784063 + L1Md_T LINE L1 5959 6582 0 6 1183 576 276 190 6 chr17 78488727 78489051 -16783600 - MTD LTR MaLR 0 419 3 6 1183 302 80 0 20 chr17 78489619 78489670 -16782981 + (TA)n Simple_repeat Simple_repeat 1 50 0 6 1183 748 301 88 4 chr17 78490057 78490317 -16782334 + B4 SINE B4 5 286 -6 6 1183 333 0 0 0 chr17 78490365 78490402 -16782249 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 1183 462 308 77 30 chr17 78490732 78491070 -16781581 + L1MC LINE L1 5313 5666 -2216 6 1183 771 199 0 0 chr17 78491623 78491918 -16780733 + (TG)n Simple_repeat Simple_repeat 1 295 0 6 1183 668 287 24 50 chr17 78491918 78492215 -16780436 - B4A SINE B4 0 292 4 6 1183 2091 145 39 8 chr17 78493383 78493738 -16778913 - ORR1B2 LTR MaLR -1 366 1 6 1183 1010 72 24 0 chr17 78494041 78494207 -16778444 + (TCTA)n Simple_repeat Simple_repeat 1 170 0 6 1183 372 356 61 0 chr17 78494215 78494347 -16778304 - B1_Mur1 SINE Alu -7 142 3 6 1183 362 320 88 24 chr17 78494389 78494514 -16778137 + RSINE1 SINE B4 5 137 -28 6 1183 279 0 0 0 chr17 78494516 78494547 -16778104 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 1183 723 284 137 2 chr17 78494758 78495168 -16777483 - L1MA7 LINE L1 -12 6279 5815 6 1183 284 277 37 37 chr17 78495319 78495480 -16777171 - L1MA7 LINE L1 -860 5283 5086 6 1183 229 253 96 0 chr17 78495510 78495593 -16777058 + MTEa LTR MaLR 286 376 -3 6 1183 3277 41 2 30 chr17 78495717 78496143 -16776508 + L1Md_F2 LINE L1 6167 6580 -2 6 1183 247 225 13 66 chr17 78497580 78497656 -16774995 + MTEa LTR MaLR 268 339 -40 6 1183 475 307 7 20 chr17 78497693 78497846 -16774805 + MTE-int LTR MaLR 1 151 -1429 6 1183 828 353 108 59 chr17 78498003 78498289 -16774362 + MTE-int LTR MaLR 548 847 -733 6 1183 2254 165 50 8 chr17 78498289 78498691 -16773960 - MTC LTR MaLR 0 421 3 6 1183 828 353 108 59 chr17 78498691 78499051 -16773600 + MTE-int LTR MaLR 848 1225 -355 6 1183 639 252 48 86 chr17 78500505 78500774 -16771877 - L1M1 LINE L1 -483 5817 5559 1 1183 824 287 66 19 chr17 78500957 78501216 -16771435 - B4A SINE B4 -21 271 1 2 1183 2412 252 62 6 chr17 78502724 78503415 -16769236 + Lx9 LINE L1 6729 7458 -186 3 1183 1210 242 8 124 chr17 78503415 78503914 -16768737 - BGLII_B LTR ERVK 0 441 1 4 1183 3821 228 61 20 chr17 78503919 78505150 -16767501 - MYSERV16_I-int LTR ERVK -3 2323 1043 4 1183 302 235 78 70 chr17 78505150 78505278 -16767373 - RMER4A LTR ERVK -43 423 295 5 1183 1534 239 62 74 chr17 78505280 78505953 -16766698 - MYSERV16_I-int LTR ERVK -1418 908 244 4 1183 237 234 81 0 chr17 78506010 78506134 -16766517 + Lx9 LINE L1 7504 7637 -7 3 1183 558 0 0 0 chr17 78507385 78507447 -16765204 + (TG)n Simple_repeat Simple_repeat 2 63 0 6 1183 561 174 0 34 chr17 78507521 78507670 -16764981 + CT-rich Low_complexity Low_complexity 6 149 0 7 1183 518 276 19 34 chr17 78507687 78507893 -16764758 + Lx7 LINE L1 7097 7299 -397 8 1183 249 253 108 0 chr17 78508911 78508994 -16763657 + ID_B1 SINE B4 131 222 -2 9 1183 21 36 0 0 chr17 78509014 78509042 -16763609 + AT_rich Low_complexity Low_complexity 1 28 0 1 1183 618 14 0 0 chr17 78509729 78509800 -16762851 + (GA)n Simple_repeat Simple_repeat 1 71 0 1 1183 350 361 97 5 chr17 78509991 78510186 -16762465 + L2 LINE L2 2309 2521 -898 1 1183 328 365 47 0 chr17 78510605 78510712 -16761939 + PB1D10 SINE Alu 1 112 -5 1 1183 699 302 5 19 chr17 78510930 78511139 -16761512 + B3 SINE B2 5 210 -6 1 1183 21 36 0 0 chr17 78511370 78511398 -16761253 + AT_rich Low_complexity Low_complexity 1 28 0 1 1184 3018 86 5 14 chr17 78514860 78515296 -16757355 + L1_Mus3 LINE L1 6203 6634 -4 1 1184 386 262 139 0 chr17 78515734 78515856 -16756795 + B1_Mur2 SINE Alu 3 141 -8 1 1184 483 18 0 0 chr17 78516697 78516753 -16755898 + (TATAG)n Simple_repeat Simple_repeat 2 57 0 1 1184 469 334 244 30 chr17 78517136 78517670 -16754981 + L1M4b LINE L1 666 1313 -6021 1 1184 311 287 34 28 chr17 78517794 78517973 -16754678 + L1M4b LINE L1 1522 1701 -5633 1 1184 229 252 69 29 chr17 78518170 78518272 -16754379 + L1M4b LINE L1 2372 2477 -4625 1 1184 235 210 32 16 chr17 78519059 78519122 -16753529 + L1M4b LINE L1 3454 3517 -3817 1 1184 336 304 65 52 chr17 78519134 78519287 -16753364 + MLT1B LTR MaLR 7 161 -229 2 1184 468 323 0 8 chr17 78519329 78519457 -16753194 - RSINE1 SINE B4 -1 164 38 2 1184 485 335 56 5 chr17 78519504 78519702 -16752949 + MLT1B LTR MaLR 183 390 0 2 1184 380 330 130 19 chr17 78519860 78520076 -16752575 + L1M4b LINE L1 4434 4673 -2333 1 1184 310 321 0 77 chr17 78520084 78520175 -16752476 + ID_B1 SINE B4 86 169 -55 2 1184 231 272 12 24 chr17 78520180 78520263 -16752388 + GA-rich Low_complexity Low_complexity 3 84 0 2 1184 466 292 53 3 chr17 78520275 78520494 -16752157 + L1M4b LINE L1 5336 5568 -1438 1 1184 2668 100 264 45 chr17 78520738 78521231 -16751420 + MT2B LTR ERVL 1 601 0 2 1184 405 0 0 0 chr17 78521860 78521905 -16750746 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1184 205 211 19 0 chr17 78523724 78523776 -16748875 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 2 1184 326 134 63 4 chr17 78523822 78523896 -16748755 - B1F2 SINE Alu -66 83 2 2 1184 297 210 32 0 chr17 78523842 78523904 -16748747 - B4 SINE B4 -150 142 79 2 1184 2285 173 40 0 chr17 78525173 78525578 -16747073 + MTC LTR MaLR 1 421 0 2 1184 341 254 0 53 chr17 78525957 78526032 -16746619 - ID4_ SINE ID -9 74 4 3 1184 180 0 0 0 chr17 78526969 78526989 -16745662 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 1184 347 21 0 41 chr17 78527021 78527070 -16745581 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 3 1184 1167 50 0 0 chr17 78527143 78527282 -16745369 + B1_Mm SINE Alu 2 140 -7 3 1184 300 27 0 0 chr17 78527353 78527390 -16745261 + (CGTG)n Simple_repeat Simple_repeat 3 39 0 3 1184 664 335 29 37 chr17 78527390 78527632 -16745019 + B4A SINE B4 52 291 -1 3 1184 214 254 17 0 chr17 78527637 78527696 -16744955 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 1184 855 222 63 11 chr17 78528396 78528587 -16744064 + B3 SINE B2 3 203 -13 3 1184 1312 97 11 0 chr17 78528587 78528772 -16743879 - B2_Mm1t SINE B2 -6 187 1 3 1184 582 306 0 7 chr17 78529054 78529189 -16743462 + RSINE1 SINE B4 3 136 -29 3 1184 746 284 39 0 chr17 78529249 78529453 -16743198 - ID_B1 SINE B4 -10 214 3 4 1184 423 0 0 0 chr17 78529496 78529543 -16743108 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 1184 306 261 0 0 chr17 78529844 78529982 -16742669 + (TG)n Simple_repeat Simple_repeat 1 138 0 4 1184 610 273 90 35 chr17 78530024 78530225 -16742426 + ID_B1 SINE B4 3 214 -10 4 1184 423 56 0 0 chr17 78530294 78530348 -16742303 + (TGGA)n Simple_repeat Simple_repeat 4 57 0 4 1184 347 271 39 19 chr17 78530376 78530530 -16742121 + L1MA8 LINE L1 5806 5962 -329 4 1184 425 293 148 19 chr17 78530998 78531308 -16741343 + L1MC1 LINE L1 5950 6299 -34 4 1184 505 291 104 23 chr17 78531914 78532135 -16740516 - MLT2B4 LTR ERVL -7 560 304 4 1184 382 316 0 0 chr17 78532135 78532233 -16740418 + ID_B1 SINE B4 2 99 -125 4 1184 616 315 55 16 chr17 78532300 78532555 -16740096 - MLT2B4 LTR ERVL -290 266 2 4 1184 550 281 43 41 chr17 78533311 78533656 -16738995 + L1MC LINE L1 4976 5321 -825 4 1184 790 0 0 0 chr17 78533661 78533759 -16738892 - L1Md_A LINE L1 -57 6525 6428 5 1184 509 0 0 0 chr17 78533759 78533823 -16738828 + L1Md_T LINE L1 6519 6582 0 5 1184 495 265 46 18 chr17 78533834 78534053 -16738598 + L1MC LINE L1 5329 5553 -780 4 1184 308 242 81 0 chr17 78534056 78534155 -16738496 + B3 SINE B2 110 216 0 5 1184 464 261 43 21 chr17 78534214 78534355 -16738296 + B1F1 SINE Alu 1 144 -5 5 1184 1519 156 35 75 chr17 78534384 78534843 -16737808 + RMER17C LTR ERVK 16 439 -519 5 1184 228 216 0 0 chr17 78534951 78535002 -16737649 + A-rich Low_complexity Low_complexity 1 51 0 5 1184 859 162 6 17 chr17 78535022 78535198 -16737453 + GA-rich Low_complexity Low_complexity 2 175 0 5 1184 781 134 0 32 chr17 78535502 78535625 -16737026 + B1_Mur4 SINE Alu 7 125 -25 5 1184 23 0 0 0 chr17 78535625 78535648 -16737003 + AT_rich Low_complexity Low_complexity 1 23 0 5 1184 204 125 0 0 chr17 78535652 78535684 -16736967 + (A)n Simple_repeat Simple_repeat 1 32 0 5 1184 234 62 0 0 chr17 78535704 78535736 -16736915 + (A)n Simple_repeat Simple_repeat 1 32 0 5 1184 186 336 169 4 chr17 78536035 78536277 -16736374 + L2 LINE L2 2363 2644 -775 6 1184 387 0 0 0 chr17 78538253 78538296 -16734355 + (TA)n Simple_repeat Simple_repeat 2 44 0 6 1184 1167 274 122 11 chr17 78538365 78538742 -16733909 + MTD LTR MaLR 1 419 0 6 1184 367 357 46 50 chr17 78540605 78540867 -16731784 + MamSINE1 SINE tRNA 28 288 -2 6 1184 180 111 0 0 chr17 78541566 78541593 -16731058 + (CAG)n Simple_repeat Simple_repeat 2 28 0 6 1184 188 324 42 59 chr17 78542093 78542211 -16730440 + MIR SINE MIR 124 239 -23 6 1184 228 405 71 0 chr17 78542866 78542992 -16729659 - MIRm SINE MIR -90 186 52 6 1184 655 202 40 0 chr17 78543010 78543134 -16729517 + B1_Mur4 SINE Alu 2 130 -20 6 1184 199 351 45 62 chr17 78543179 78543358 -16729293 - MER5A DNA MER1_type 0 189 14 6 1184 235 208 44 50 chr17 78544194 78544318 -16728333 + MIR SINE MIR 98 240 -36 6 1184 189 0 0 0 chr17 78545766 78545787 -16726864 + (CA)n Simple_repeat Simple_repeat 2 22 0 7 1184 189 0 0 0 chr17 78546261 78546282 -16726369 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 7 1184 262 271 0 0 chr17 78546726 78546796 -16725855 - MER53 DNA hAT 0 193 124 7 1184 436 251 117 27 chr17 78546938 78547126 -16725525 + L2a LINE L2 3222 3426 0 7 1184 618 269 18 42 chr17 78547270 78547437 -16725214 + B3 SINE B2 48 210 -6 7 1184 227 268 18 0 chr17 78548317 78548373 -16724278 + GA-rich Low_complexity Low_complexity 2 58 0 7 1184 429 344 119 45 chr17 78548703 78548904 -16723747 + B3 SINE B2 1 216 0 7 1184 1686 288 91 39 chr17 78548930 78549878 -16722773 - Lx8 LINE L1 -5 7468 6472 7 1184 31 0 0 0 chr17 78549911 78549942 -16722709 + AT_rich Low_complexity Low_complexity 1 31 0 7 1184 430 320 19 0 chr17 78550649 78550752 -16721899 + PB1D10 SINE Alu 7 111 -6 7 1184 194 329 43 0 chr17 78551088 78551158 -16721493 - L3 LINE CR1 -859 3630 3558 8 1184 260 310 0 101 chr17 78551595 78551674 -16720977 + ID4_ SINE ID 10 80 -3 8 1184 21 36 0 0 chr17 78551674 78551702 -16720949 + AT_rich Low_complexity Low_complexity 1 28 0 8 1184 23 33 0 0 chr17 78552451 78552481 -16720170 + AT_rich Low_complexity Low_complexity 1 30 0 8 1184 265 313 41 114 chr17 78552700 78552920 -16719731 + L2b LINE L2 3176 3379 -8 8 1184 21 0 0 0 chr17 78552928 78552949 -16719702 + AT_rich Low_complexity Low_complexity 1 21 0 8 1184 469 287 57 13 chr17 78553247 78553406 -16719245 + MIRb SINE MIR 99 264 -4 8 1184 183 276 42 132 chr17 78553274 78553441 -16719210 - L3 LINE CR1 -862 3627 3476 8 1184 732 297 139 10 chr17 78553762 78554071 -16718580 - MLT1A0 LTR MaLR 0 365 17 8 1184 252 357 93 1 chr17 78555000 78555166 -16717485 + MIRb SINE MIR 24 209 -59 8 1184 533 290 106 13 chr17 78556477 78556704 -16715947 + B4A SINE B4 1 248 -44 9 1184 414 0 0 0 chr17 78556728 78556774 -16715877 + (CA)n Simple_repeat Simple_repeat 1 46 0 9 1184 2807 107 16 11 chr17 78557677 78558113 -16714538 - Lx2A1 LINE L1 -578 6430 5993 9 1184 1687 118 11 0 chr17 78558114 78558376 -16714275 + Lx2A1 LINE L1 6730 6994 -14 9 1184 330 26 0 0 chr17 78559532 78559571 -16713080 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 1184 1629 207 39 5 chr17 78560290 78560678 -16711973 + MTD LTR MaLR 19 419 0 9 1184 302 326 16 0 chr17 78560931 78561060 -16711591 - MLT1E1A LTR MaLR 0 680 550 9 1184 276 100 0 0 chr17 78561158 78561198 -16711453 + (CACCAT)n Simple_repeat Simple_repeat 5 44 0 9 1184 239 363 24 61 chr17 78561284 78561422 -16711229 - MLT1E1A LTR MaLR -415 145 3 9 1184 384 22 0 0 chr17 78561505 78561550 -16711101 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 1184 337 264 23 11 chr17 78561555 78561643 -16711008 + PB1 SINE Alu 39 127 0 9 1184 345 47 0 0 chr17 78563803 78563846 -16708805 + (TTA)n Simple_repeat Simple_repeat 1 43 0 1 1184 615 255 20 7 chr17 78564449 78564595 -16708056 - B1_Mur1 SINE Alu -1 148 1 1 1184 208 176 14 14 chr17 78565759 78565828 -16706823 + (TG)n Simple_repeat Simple_repeat 1 69 0 1 1184 323 81 76 61 chr17 78565829 78565895 -16706756 - HAL1-3A_ME LINE L1 -847 2011 1945 1 1184 327 303 86 19 chr17 78566270 78566388 -16706263 + PB1D10 SINE Alu 2 127 0 1 1184 299 292 28 19 chr17 78566389 78566497 -16706154 + B4A SINE B4 4 112 -180 1 1184 204 40 0 0 chr17 78566696 78566721 -16705930 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1184 1043 248 59 40 chr17 78566743 78567168 -16705483 + L1M4 LINE L1 2458 2890 -3256 1 1184 1269 269 178 55 chr17 78567163 78567371 -16705280 + L1M4 LINE L1 3368 3613 -2533 1 1184 573 15 0 0 chr17 78567371 78567437 -16705214 + (GA)n Simple_repeat Simple_repeat 2 67 0 1 1184 1269 269 178 55 chr17 78567437 78567575 -16705076 + L1M4 LINE L1 3614 3757 -2389 1 1184 4086 75 0 15 chr17 78567575 78568116 -16704535 + L1Md_F2 LINE L1 6050 6582 0 1 1184 1269 269 178 55 chr17 78568116 78568627 -16704024 + L1M4 LINE L1 3758 4332 -1814 1 1184 976 148 14 69 chr17 78568737 78568954 -16703697 - Lx4B LINE L1 0 7058 6854 1 1184 2494 169 80 19 chr17 78568963 78569164 -16703487 + L1_Mur2 LINE L1 5025 5226 -651 1 1184 522 0 0 0 chr17 78569164 78569222 -16703429 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 1184 2494 169 80 19 chr17 78569222 78569543 -16703108 + L1_Mur2 LINE L1 5227 5578 -299 1 1184 449 289 7 82 chr17 78569599 78569746 -16702905 + B1F SINE Alu 6 141 -8 1 1184 1738 21 0 0 chr17 78569782 78569975 -16702676 + B2_Mm1a SINE B2 1 193 0 1 1184 258 289 72 22 chr17 78569987 78570125 -16702526 + L1M4 LINE L1 4403 4547 -1599 1 1184 409 226 111 16 chr17 78570173 78570299 -16702352 + RMER30 DNA MER1_type 1 138 -64 1 1184 590 247 23 91 chr17 78570340 78570603 -16702048 + L1M4 LINE L1 4601 4845 -1301 1 1184 406 292 21 55 chr17 78570855 78571000 -16701651 + ID_B1 SINE B4 85 224 0 1 1184 22 0 0 0 chr17 78571044 78571066 -16701585 + GC_rich Low_complexity Low_complexity 1 22 0 1 1184 480 17 0 0 chr17 78571066 78571125 -16701526 - B1_Mus2 SINE Alu -9 138 80 1 1184 304 276 94 0 chr17 78571125 78571285 -16701366 + L1M1 LINE L1 5579 5765 -538 1 1184 225 154 0 0 chr17 78572866 78572905 -16699746 + (TAA)n Simple_repeat Simple_repeat 2 40 0 1 1184 304 240 119 10 chr17 78573871 78573972 -16698679 - PB1D10 SINE Alu -5 112 1 1 1184 510 300 92 34 chr17 78574320 78574582 -16698069 + MER20B DNA MER1_type 119 395 -388 1 1184 404 169 32 13 chr17 78574624 78574780 -16697871 + (TA)n Simple_repeat Simple_repeat 2 160 0 1 1184 388 306 53 20 chr17 78574811 78574961 -16697690 + MER20B DNA MER1_type 445 599 -184 1 1184 295 350 114 0 chr17 78574971 78575094 -16697557 + ID_B1 SINE B4 81 217 -7 1 1184 780 11 0 0 chr17 78575636 78575725 -16696926 + (TTC)n Simple_repeat Simple_repeat 2 90 0 1 1184 1135 56 7 0 chr17 78575725 78575869 -16696782 - B1_Mus2 SINE Alu -2 145 1 1 1184 798 109 0 0 chr17 78575880 78575999 -16696652 + (TC)n Simple_repeat Simple_repeat 2 120 0 1 1184 1386 57 5 15 chr17 78575999 78576196 -16696455 - L1Md_F2 LINE L1 -4 6578 6384 1 1184 3299 42 0 0 chr17 78576196 78576579 -16696072 + L1Md_F2 LINE L1 5995 6377 -205 1 1184 1058 113 12 0 chr17 78576579 78576747 -16695904 + (TTTC)n Simple_repeat Simple_repeat 3 172 0 1 1184 448 266 42 7 chr17 78577759 78577903 -16694748 + B1F2 SINE Alu 1 149 0 1 1184 267 292 0 50 chr17 78578162 78578263 -16694388 + GA-rich Low_complexity Low_complexity 2 97 0 1 1184 296 167 0 14 chr17 78578306 78578379 -16694272 + (TG)n Simple_repeat Simple_repeat 1 72 0 1 1184 425 103 15 0 chr17 78578415 78578483 -16694168 + (TATG)n Simple_repeat Simple_repeat 2 70 0 1 1184 597 201 0 0 chr17 78578502 78578530 -16694121 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1184 528 84 0 0 chr17 78578530 78578613 -16694038 + (TCTCTG)n Simple_repeat Simple_repeat 6 88 0 1 1184 597 217 0 0 chr17 78578613 78578901 -16693750 + (TG)n Simple_repeat Simple_repeat 1 288 0 1 1184 308 118 15 0 chr17 78578909 78578977 -16693674 + (TCTG)n Simple_repeat Simple_repeat 4 72 0 1 1184 243 309 0 12 chr17 78579168 78579250 -16693401 + CT-rich Low_complexity Low_complexity 4 84 0 1 1184 756 286 167 10 chr17 78581376 78581676 -16690975 - Lx6 LINE L1 -23 7437 7091 1 1184 2109 182 11 0 chr17 78582276 78582650 -16690001 + ORR1C1 LTR MaLR 1 378 0 1 1184 275 326 73 48 chr17 78582796 78583002 -16689649 + MIR SINE MIR 18 228 -34 1 1184 1688 161 34 25 chr17 78583149 78583474 -16689177 - ORR1A4 LTR MaLR -1 328 1 1 1184 2456 80 9 3 chr17 78583888 78584226 -16688425 + L1Md_F2 LINE L1 6243 6582 0 1 1184 510 17 0 0 chr17 78586140 78586199 -16686452 + (TTCC)n Simple_repeat Simple_repeat 2 60 0 1 1184 246 219 269 71 chr17 78586274 78586456 -16686195 - Lx9 LINE L1 -8 7636 7419 1 1184 229 195 0 0 chr17 78586475 78586516 -16686135 - Lx9 LINE L1 -167 7477 7437 1 1184 527 53 13 0 chr17 78586516 78586591 -16686060 + (TG)n Simple_repeat Simple_repeat 2 77 0 1 1184 4947 219 43 50 chr17 78586627 78587239 -16685412 - Lx9 LINE L1 -119 7525 6923 1 1184 5018 34 7 10 chr17 78587239 78587839 -16684812 + L1Md_F2 LINE L1 5985 6582 0 1 1184 4947 219 43 50 chr17 78587839 78588466 -16684185 - Lx9 LINE L1 -722 6922 6295 1 1184 4042 155 22 22 chr17 78588640 78588848 -16683803 - Lx2B LINE L1 -322 6678 6470 1 1184 306 73 0 0 chr17 78588848 78588889 -16683762 + (TAA)n Simple_repeat Simple_repeat 1 41 0 1 1184 4042 155 22 22 chr17 78588889 78589452 -16683199 - Lx2B LINE L1 -531 6469 5907 1 1184 776 312 9 9 chr17 78589439 78589659 -16682992 - Lx8 LINE L1 -752 6721 6502 1 1184 30 0 0 0 chr17 78589922 78589952 -16682699 + AT_rich Low_complexity Low_complexity 1 30 0 1 1184 715 238 41 51 chr17 78589962 78590157 -16682494 + B3A SINE B2 1 193 -5 1 1184 231 327 0 0 chr17 78590240 78590327 -16682324 - MIRb SINE MIR -159 117 31 1 1184 260 348 88 104 chr17 78591417 78591850 -16680801 - MLT1J2 LTR MaLR -20 428 3 1 1184 4253 188 56 35 chr17 78592090 78593020 -16679631 + Lx2B LINE L1 6048 6996 -4 1 1184 223 211 0 50 chr17 78593374 78593434 -16679217 + CT-rich Low_complexity Low_complexity 5 61 0 1 1184 501 219 0 0 chr17 78593443 78593539 -16679112 - PB1D10 SINE Alu -21 96 1 1 1184 296 248 165 53 chr17 78593948 78594118 -16678533 + L1M5 LINE L1 5543 5731 -393 1 1184 302 283 16 24 chr17 78594351 78594474 -16678177 + CT-rich Low_complexity Low_complexity 3 124 0 1 1184 225 0 0 0 chr17 78594575 78594600 -16678051 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1184 302 196 790 8 chr17 78595161 78595280 -16677371 + B3 SINE B2 1 212 -4 1 1184 181 283 0 0 chr17 78595856 78595902 -16676749 - MIRb SINE MIR -93 175 130 1 1184 399 41 0 0 chr17 78596391 78596440 -16676211 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1 1184 21 57 0 0 chr17 78599279 78599314 -16673337 + GC_rich Low_complexity Low_complexity 1 35 0 1 1184 341 297 0 57 chr17 78599357 78599532 -16673119 + G-rich Low_complexity Low_complexity 2 166 0 1 1184 29 78 0 0 chr17 78599926 78599990 -16672661 + GC_rich Low_complexity Low_complexity 1 64 0 1 1184 23 97 0 0 chr17 78600006 78600078 -16672573 + GC_rich Low_complexity Low_complexity 1 72 0 1 1184 464 0 0 18 chr17 78601552 78601609 -16671042 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1184 450 176 17 8 chr17 78602484 78602604 -16670047 + CT-rich Low_complexity Low_complexity 2 122 0 1 1184 396 234 0 12 chr17 78604920 78605270 -16667381 + (TG)n Simple_repeat Simple_repeat 1 345 0 1 1184 252 0 0 0 chr17 78605356 78605384 -16667267 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1184 354 45 0 0 chr17 78605384 78605427 -16667224 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 1184 443 273 27 67 chr17 78605439 78605588 -16667063 - RSINE1 SINE B4 -1 164 22 1 1184 1421 83 107 5 chr17 78606352 78606557 -16666094 + URR1A DNA MER1_type 1 226 0 1 1184 342 0 0 0 chr17 78607773 78607811 -16664840 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1184 702 0 0 0 chr17 78607897 78607975 -16664676 + (TC)n Simple_repeat Simple_repeat 1 78 0 1 1184 277 179 29 184 chr17 78608222 78608284 -16664367 - MER5A1 DNA MER1_type -4 162 112 1 1184 324 169 111 14 chr17 78608284 78608356 -16664295 + ID4 SINE ID 5 83 0 1 1184 277 179 29 184 chr17 78608356 78608396 -16664255 - MER5A1 DNA MER1_type -55 111 76 1 1184 6305 60 38 6 chr17 78609967 78610792 -16661859 - L1_Mus3 LINE L1 0 6638 5788 1 1184 1189 194 0 10 chr17 78610832 78611040 -16661611 + B3 SINE B2 1 206 -10 1 1184 222 37 0 0 chr17 78611188 78611215 -16661436 + (TTTTTA)n Simple_repeat Simple_repeat 4 30 0 1 1184 252 86 0 0 chr17 78611691 78611726 -16660925 + (TTG)n Simple_repeat Simple_repeat 3 37 0 1 1184 202 216 0 0 chr17 78613740 78613777 -16658874 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1184 692 312 36 104 chr17 78614570 78614849 -16657802 - B4A SINE B4 -31 261 2 1 1184 184 30 61 0 chr17 78615167 78615200 -16657451 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1184 279 295 113 26 chr17 78616124 78616239 -16656412 + L2c LINE L2 3259 3383 -4 1 1184 333 0 0 0 chr17 78620279 78620316 -16652335 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1184 237 301 117 7 chr17 78621801 78621938 -16650713 + MIR SINE MIR 111 262 0 1 1184 28 0 0 0 chr17 78623256 78623284 -16649367 + AT_rich Low_complexity Low_complexity 1 28 0 1 1184 208 122 49 0 chr17 78627099 78627140 -16645511 + T-rich Low_complexity Low_complexity 1 43 0 1 1184 889 167 21 0 chr17 78627141 78627285 -16645366 - B1_Mus2 SINE Alu 0 147 1 1 1184 328 325 63 0 chr17 78627679 78627805 -16644846 - L2a LINE L2 0 3426 3293 1 1184 426 39 0 0 chr17 78628334 78628386 -16644265 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1184 391 188 0 12 chr17 78630372 78630453 -16642198 + ORR1D2 LTR MaLR 64 143 -227 1 1184 616 58 0 0 chr17 78633949 78634035 -16638616 + BC1_Mm scRNA scRNA 1 86 -66 1 1184 557 147 9 0 chr17 78634408 78634517 -16638134 + (CA)n Simple_repeat Simple_repeat 1 110 0 1 1184 669 180 133 0 chr17 78634651 78634779 -16637872 + B1_Mus1 SINE Alu 1 145 -3 1 1184 236 250 0 0 chr17 78634780 78634828 -16637823 + GA-rich Low_complexity Low_complexity 1 48 0 2 1184 192 40 0 0 chr17 78635914 78635939 -16636712 + (TTGGGG)n Simple_repeat Simple_repeat 1 25 0 2 1184 467 318 52 0 chr17 78635988 78636142 -16636509 - B3A SINE B2 -36 162 1 2 1184 345 100 0 0 chr17 78636543 78636593 -16636058 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1184 220 310 0 0 chr17 78636724 78636782 -16635869 - B4A SINE B4 -233 59 2 2 1184 969 104 0 0 chr17 78638391 78638593 -16634058 + (TG)n Simple_repeat Simple_repeat 1 202 0 2 1184 1840 242 22 22 chr17 78638595 78639005 -16633646 - Lx6 LINE L1 -26 7434 7025 2 1184 432 286 199 36 chr17 78639157 78639760 -16632891 - Kanga2_a DNA Tc2 -145 743 43 2 1184 197 108 27 0 chr17 78641532 78641569 -16631082 + (CTTTG)n Simple_repeat Simple_repeat 2 39 0 2 1184 481 306 32 0 chr17 78642540 78642664 -16629987 + RSINE1 SINE B4 9 136 -29 2 1185 369 0 0 0 chr17 78643888 78643929 -16628722 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1185 186 43 0 0 chr17 78645113 78645136 -16627515 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 1185 210 143 0 0 chr17 78645714 78645749 -16626902 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 2 1185 26 0 0 0 chr17 78646764 78646790 -16625861 + AT_rich Low_complexity Low_complexity 1 26 0 2 1185 336 24 0 0 chr17 78647206 78647247 -16625404 + (TTATA)n Simple_repeat Simple_repeat 5 45 0 2 1185 1461 36 0 0 chr17 78647386 78647641 -16625010 + (TG)n Simple_repeat Simple_repeat 1 255 0 2 1185 217 0 61 0 chr17 78648076 78648109 -16624542 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 2 1185 482 205 69 132 chr17 78648868 78649042 -16623609 + URR1B DNA MER1_type 1 163 -62 2 1185 413 153 14 0 chr17 78649139 78649211 -16623440 + URR1B DNA MER1_type 153 225 0 2 1185 272 120 20 0 chr17 78651003 78651053 -16621598 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 2 1185 384 22 0 0 chr17 78651063 78651108 -16621543 + (CTCA)n Simple_repeat Simple_repeat 3 47 0 2 1185 353 217 119 28 chr17 78651344 78651453 -16621198 + B3A SINE B2 1 119 -79 2 1185 614 35 35 0 chr17 78651479 78651566 -16621085 + (CATATA)n Simple_repeat Simple_repeat 6 95 0 2 1185 659 239 42 7 chr17 78651613 78651756 -16620895 + B1_Mur1 SINE Alu 2 149 0 2 1185 564 209 12 25 chr17 78653168 78653330 -16619321 + CT-rich Low_complexity Low_complexity 4 163 0 2 1185 342 0 0 0 chr17 78654081 78654119 -16618532 + (TTA)n Simple_repeat Simple_repeat 2 39 0 2 1185 1517 53 16 0 chr17 78654655 78654842 -16617809 + B2_Mm2 SINE B2 1 190 -5 2 1185 1366 199 112 31 chr17 78655922 78656306 -16616345 + MTD LTR MaLR 5 419 0 2 1185 595 289 136 42 chr17 78656713 78656977 -16615674 + B4A SINE B4 2 290 -2 2 1185 1583 231 41 38 chr17 78657900 78658318 -16614333 + MTD LTR MaLR 1 419 0 2 1185 25 0 0 0 chr17 78658670 78658695 -16613956 + AT_rich Low_complexity Low_complexity 1 25 0 2 1185 234 136 0 0 chr17 78659469 78659513 -16613138 + (TCCC)n Simple_repeat Simple_repeat 3 46 0 2 1185 913 113 56 14 chr17 78660376 78660519 -16612132 + B1_Mur4 SINE Alu 1 149 -1 2 1185 210 261 145 107 chr17 78662011 78662170 -16610481 + B4A SINE B4 2 166 -126 2 1185 543 118 0 0 chr17 78662289 78662374 -16610277 + (GA)n Simple_repeat Simple_repeat 1 85 0 2 1185 287 289 31 0 chr17 78663235 78663332 -16609319 + RSINE1 SINE B4 62 161 -4 2 1185 502 312 200 32 chr17 78663521 78663819 -16608832 + Tigger12A DNA MER2_type 1 361 -430 2 1185 243 0 0 0 chr17 78663819 78663846 -16608805 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1185 502 312 200 32 chr17 78663846 78663927 -16608724 + Tigger12A DNA MER2_type 362 444 -347 2 1185 306 0 0 0 chr17 78664135 78664169 -16608482 + (T)n Simple_repeat Simple_repeat 1 34 0 2 1185 251 351 9 9 chr17 78664598 78664710 -16607941 + CT-rich Low_complexity Low_complexity 1 112 0 2 1185 817 174 0 26 chr17 78666338 78666491 -16606160 + B1_Mur3 SINE Alu 1 149 0 2 1185 233 258 30 15 chr17 78666624 78666691 -16605960 + MLT1J LTR MaLR 86 153 -359 2 1185 1352 167 19 0 chr17 78668695 78668911 -16603740 - URR1B DNA MER1_type 0 225 6 2 1185 192 263 133 54 chr17 78669210 78669333 -16603318 - MIRb SINE MIR -125 143 2 2 1185 357 43 0 0 chr17 78669876 78669923 -16602728 + (TCTG)n Simple_repeat Simple_repeat 4 50 0 2 1185 390 308 17 0 chr17 78671212 78671332 -16601319 - MER5A DNA MER1_type -29 160 39 2 1185 241 167 0 0 chr17 78671498 78671540 -16601111 - MER5A DNA MER1_type -145 44 9 2 1185 473 324 23 17 chr17 78671760 78671936 -16600715 - MER5B DNA MER1_type -1 177 1 2 1185 191 351 75 0 chr17 78672670 78672764 -16599887 + MIRm SINE MIR 69 169 -107 2 1185 491 250 23 30 chr17 78673120 78673252 -16599399 - B1_Mm SINE Alu -18 131 1 2 1185 802 177 13 20 chr17 78675775 78675925 -16596726 + B1_Mur1 SINE Alu 1 149 0 2 1185 570 197 8 41 chr17 78676560 78676682 -16595969 + ID_B1 SINE B4 106 223 -1 2 1185 333 0 0 0 chr17 78677325 78677362 -16595289 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1185 391 275 0 0 chr17 78678156 78678247 -16594404 + ID_B1 SINE B4 79 169 -55 2 1185 28 48 0 0 chr17 78680215 78680257 -16592394 + AT_rich Low_complexity Low_complexity 1 42 0 2 1185 352 325 130 49 chr17 78681736 78681959 -16590692 - MTEa LTR MaLR -71 308 68 2 1185 933 115 235 6 chr17 78681966 78682149 -16590502 + URR1A DNA MER1_type 1 225 -1 2 1185 247 347 76 31 chr17 78682664 78682887 -16589764 + L3 LINE CR1 4254 4486 -3 2 1185 285 109 0 0 chr17 78683503 78683549 -16589102 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 2 1185 354 45 0 0 chr17 78688402 78688446 -16584205 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1185 378 0 0 0 chr17 78689036 78689078 -16583573 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1185 185 0 0 39 chr17 78689314 78689340 -16583311 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2 1185 180 0 0 0 chr17 78690092 78690112 -16582539 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1185 29 0 0 0 chr17 78690316 78690345 -16582306 + AT_rich Low_complexity Low_complexity 1 29 0 2 1185 313 344 151 11 chr17 78691045 78691230 -16581421 - Tigger7 DNA MER2_type -5 2486 2276 2 1185 439 234 22 13 chr17 78691234 78691340 -16581311 + B1F SINE Alu 2 107 -13 2 1185 315 303 56 0 chr17 78691802 78691891 -16580760 - L2c LINE L2 -232 3155 3062 2 1185 287 342 57 62 chr17 78693227 78693420 -16579231 - MIR SINE MIR -48 214 23 2 1185 239 0 0 31 chr17 78693606 78693638 -16579013 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 2 1185 297 123 88 0 chr17 78694074 78694131 -16578520 - B2_Mm1t SINE B2 -1 192 131 2 1185 626 249 72 57 chr17 78694248 78694457 -16578194 + B3 SINE B2 4 215 -1 2 1185 533 288 65 7 chr17 78696959 78697113 -16575538 + RSINE1 SINE B4 1 163 -2 2 1185 224 215 0 44 chr17 78697140 78697208 -16575443 + A-rich Low_complexity Low_complexity 6 70 0 2 1185 3060 174 36 9 chr17 78700240 78700796 -16571855 - Lx5 LINE L1 -3 7047 6477 2 1185 229 265 104 38 chr17 78701611 78701717 -16570934 + Tigger15a DNA TcMar 60 172 -543 2 1185 294 29 0 0 chr17 78702007 78702042 -16570609 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1185 630 113 0 0 chr17 78702042 78702139 -16570512 + (CA)n Simple_repeat Simple_repeat 2 98 0 2 1185 211 209 0 0 chr17 78704639 78704682 -16567969 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 2 1185 315 0 0 0 chr17 78704838 78704873 -16567778 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1185 212 292 29 44 chr17 78705839 78705907 -16566744 - L4 LINE RTE -892 1137 1071 2 1185 223 348 22 0 chr17 78706544 78706636 -16566015 - L4 LINE RTE -1731 298 205 2 1185 234 81 0 0 chr17 78706729 78706766 -16565885 + (ACTG)n Simple_repeat Simple_repeat 1 37 0 2 1185 297 0 0 0 chr17 78707288 78707321 -16565330 + (TC)n Simple_repeat Simple_repeat 1 33 0 2 1185 207 0 0 0 chr17 78708088 78708111 -16564540 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2 1185 347 370 107 41 chr17 78708424 78708742 -16563909 - L1M4 LINE L1 -531 5643 5305 2 1185 404 244 45 69 chr17 78708888 78709061 -16563590 - L1M4 LINE L1 -1027 5119 4944 2 1185 1737 269 122 35 chr17 78709313 78710182 -16562469 - L1M4 LINE L1 -1196 4950 4006 2 1185 249 341 33 76 chr17 78710185 78710369 -16562282 - MTE2a LTR MaLR 0 379 204 2 1185 208 0 62 0 chr17 78710673 78710705 -16561946 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 2 1185 554 264 27 32 chr17 78710785 78711004 -16561647 - L1M4 LINE L1 -2264 3882 3665 2 1185 747 174 208 27 chr17 78711229 78711412 -16561239 + B3 SINE B2 1 216 0 2 1185 1136 88 0 0 chr17 78711508 78711656 -16560995 + B1_Mus1 SINE Alu 1 148 0 2 1185 492 259 232 51 chr17 78712105 78712209 -16560442 - Lx9 LINE L1 -20 7624 7506 2 1185 228 86 0 0 chr17 78712209 78712244 -16560407 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 2 1185 492 259 232 51 chr17 78712244 78712432 -16560219 - Lx9 LINE L1 -139 7505 7279 2 1185 414 0 0 0 chr17 78715946 78715992 -16556659 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1185 713 200 0 36 chr17 78715997 78716137 -16556514 - Lx7 LINE L1 -852 6844 6710 2 1185 246 308 51 13 chr17 78717074 78717153 -16555498 - MIRm SINE MIR -109 167 86 2 1185 685 11 64 0 chr17 78718521 78718615 -16554036 + (GTTTG)n Simple_repeat Simple_repeat 1 100 0 2 1185 440 127 44 311 chr17 78718617 78718800 -16553851 - B1_Mur3 SINE Alu -15 134 1 2 1185 188 294 22 76 chr17 78719083 78719175 -16553476 - MIRc SINE MIR -142 126 40 2 1185 21 0 0 0 chr17 78722657 78722678 -16549973 + AT_rich Low_complexity Low_complexity 1 21 0 2 1185 495 0 0 0 chr17 78722780 78722835 -16549816 + (TTGG)n Simple_repeat Simple_repeat 2 56 0 2 1185 318 358 32 48 chr17 78722926 78723237 -16549414 - MARNA DNA Mariner -237 349 44 2 1185 414 0 0 0 chr17 78723815 78723861 -16548790 + (TTTC)n Simple_repeat Simple_repeat 2 47 0 2 1185 695 230 146 0 chr17 78724280 78724458 -16548193 - B3 SINE B2 -12 204 1 2 1185 21 0 0 0 chr17 78725083 78725104 -16547547 + AT_rich Low_complexity Low_complexity 1 21 0 2 1185 207 0 0 0 chr17 78726811 78726834 -16545817 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 3 1185 1424 80 11 0 chr17 78728843 78729031 -16543620 + B2_Mm2 SINE B2 2 191 -4 3 1185 450 0 0 0 chr17 78729918 78729968 -16542683 + (TTG)n Simple_repeat Simple_repeat 2 51 0 3 1185 180 0 0 0 chr17 78730581 78730601 -16542050 + (GA)n Simple_repeat Simple_repeat 1 20 0 3 1185 379 315 26 35 chr17 78732808 78733006 -16539645 + MIRm SINE MIR 3 193 -75 3 1185 182 273 18 18 chr17 78733188 78733244 -16539407 + MIRb SINE MIR 54 109 -159 3 1185 742 275 103 37 chr17 78733687 78733959 -16538692 + B4A SINE B4 1 290 -2 3 1185 862 267 36 58 chr17 78735141 78735419 -16537232 + B4A SINE B4 5 276 -16 3 1185 183 80 0 0 chr17 78735420 78735445 -16537206 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 3 1185 405 110 0 0 chr17 78735454 78735527 -16537124 + (GA)n Simple_repeat Simple_repeat 2 74 0 3 1185 225 94 0 0 chr17 78736054 78736086 -16536565 + (T)n Simple_repeat Simple_repeat 1 32 0 3 1185 1141 75 0 7 chr17 78736086 78736234 -16536417 - B1_Mus2 SINE Alu 0 147 1 3 1185 360 73 18 0 chr17 78736580 78736635 -16536016 + B2_Mm2 SINE B2 1 56 -139 3 1185 1063 40 0 0 chr17 78736635 78736759 -16535892 - L1Md_F2 LINE L1 -418 6164 6041 3 1185 3021 59 49 5 chr17 78736759 78737150 -16535501 + L1Md_F2 LINE L1 6175 6582 0 3 1185 767 131 13 40 chr17 78737150 78737301 -16535350 + B2_Mm2 SINE B2 31 177 -18 3 1185 396 0 0 0 chr17 78739216 78739260 -16533391 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1185 671 301 5 77 chr17 78739612 78739832 -16532819 + B4A SINE B4 69 272 -20 3 1185 229 232 57 14 chr17 78741463 78741533 -16531118 - MTEa LTR MaLR -11 368 296 3 1185 456 19 0 0 chr17 78742340 78742393 -16530258 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1185 276 259 111 0 chr17 78744090 78744109 -16528542 + PB1D7 SINE Alu 31 120 0 3 1185 301 242 0 0 chr17 78744109 78744171 -16528480 + ID_B1 SINE B4 163 224 0 3 1185 375 200 63 0 chr17 78744312 78744407 -16528244 + B3A SINE B2 98 198 0 3 1185 238 239 45 0 chr17 78747681 78747748 -16524903 + ID2 SINE ID 4 73 -10 3 1185 643 290 32 32 chr17 78747697 78747896 -16524755 + B4A SINE B4 24 222 -70 3 1185 576 42 0 0 chr17 78747896 78747967 -16524684 + (TAGA)n Simple_repeat Simple_repeat 1 71 0 3 1185 643 290 32 32 chr17 78747967 78747979 -16524672 + B4A SINE B4 223 235 -57 3 1185 210 37 0 0 chr17 78747979 78748006 -16524645 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 3 1185 643 290 32 32 chr17 78748006 78748039 -16524612 + B4A SINE B4 236 267 -25 3 1185 450 0 0 0 chr17 78748042 78748092 -16524559 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1185 554 275 20 50 chr17 78748286 78748485 -16524166 - B4A SINE B4 -99 193 1 3 1185 180 350 8 82 chr17 78749568 78749702 -16522949 + MIRb SINE MIR 142 265 -3 3 1185 267 114 0 0 chr17 78751492 78751536 -16521115 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1185 660 165 0 45 chr17 78751900 78752033 -16520618 + B1_Mur3 SINE Alu 23 149 0 3 1185 188 34 0 33 chr17 78754141 78754171 -16518480 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1185 530 153 0 9 chr17 78758724 78758836 -16513815 + (TA)n Simple_repeat Simple_repeat 1 111 0 3 1185 231 36 0 0 chr17 78760296 78760324 -16512327 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 1185 501 280 69 13 chr17 78761193 78761352 -16511299 + B4A SINE B4 65 232 -60 3 1185 244 275 0 14 chr17 78761352 78761422 -16511229 + (CA)n Simple_repeat Simple_repeat 1 69 0 3 1185 378 0 0 0 chr17 78762381 78762423 -16510228 + (GA)n Simple_repeat Simple_repeat 1 42 0 3 1185 289 360 69 38 chr17 78762933 78763092 -16509559 + MIRb SINE MIR 97 260 -8 3 1185 189 271 0 0 chr17 78770098 78770146 -16502505 + L4 LINE RTE 1429 1476 -553 3 1185 520 244 46 23 chr17 78771090 78771220 -16501431 - RSINE1 SINE B4 -29 136 4 3 1185 189 0 0 0 chr17 78771502 78771523 -16501128 + (TA)n Simple_repeat Simple_repeat 2 22 0 3 1185 414 0 0 0 chr17 78772881 78772927 -16499724 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1186 182 150 25 0 chr17 78774681 78774721 -16497930 + (TA)n Simple_repeat Simple_repeat 1 41 0 3 1186 411 78 0 0 chr17 78774872 78774936 -16497715 + (TG)n Simple_repeat Simple_repeat 2 65 0 3 1186 28 0 0 0 chr17 78775415 78775443 -16497208 + AT_rich Low_complexity Low_complexity 1 28 0 3 1186 23 0 0 0 chr17 78775780 78775803 -16496848 + AT_rich Low_complexity Low_complexity 1 23 0 3 1186 563 250 20 34 chr17 78780062 78780211 -16492440 - B1_Mur1 SINE Alu 0 149 3 3 1186 3295 3 0 0 chr17 78780219 78780579 -16492072 - L1Md_A LINE L1 0 6582 6223 3 1186 444 104 0 0 chr17 78781485 78781552 -16491099 + (TG)n Simple_repeat Simple_repeat 1 67 0 3 1186 231 182 22 22 chr17 78781623 78781668 -16490983 - ID SINE ID -151 73 29 3 1186 244 311 116 22 chr17 78781868 78782006 -16490645 + MIR SINE MIR 30 180 -82 3 1186 397 170 9 86 chr17 78782910 78783026 -16489625 - PB1D7 SINE Alu -1 119 13 3 1186 969 201 23 0 chr17 78783113 78783287 -16489364 - B3 SINE B2 -37 179 2 3 1186 22 0 0 0 chr17 78783351 78783373 -16489278 + AT_rich Low_complexity Low_complexity 1 22 0 3 1186 225 281 124 0 chr17 78783534 78783623 -16489028 + L2a LINE L2 3327 3426 0 3 1186 227 330 75 9 chr17 78787400 78787507 -16485144 + Charlie1b DNA MER1_type 1 114 -409 3 1186 462 305 112 25 chr17 78787626 78787949 -16484702 + Charlie1b DNA MER1_type 167 517 -6 3 1186 207 100 0 0 chr17 78789107 78789137 -16483514 + (GGGAGA)n Simple_repeat Simple_repeat 5 34 0 3 1186 500 0 17 0 chr17 78789495 78789555 -16483096 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 1186 299 316 33 58 chr17 78789576 78789697 -16482954 - PB1 SINE Alu -8 119 2 3 1186 946 184 81 19 chr17 78789915 78790126 -16482525 - URR1B DNA MER1_type 0 225 2 3 1186 1271 38 0 0 chr17 78791146 78791306 -16481345 + B2_Mm1a SINE B2 1 160 -33 3 1186 315 0 0 0 chr17 78791306 78791341 -16481310 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 3 1186 1038 143 0 21 chr17 78791341 78791373 -16481278 + B2_Mm2 SINE B2 159 189 -6 3 1186 803 168 21 85 chr17 78793230 78793342 -16479309 + B3 SINE B2 2 108 -108 3 1186 1036 55 0 76 chr17 78793342 78793499 -16479152 + B1_Mm SINE Alu 1 145 -2 3 1186 803 168 21 85 chr17 78793499 78793575 -16479076 + B3 SINE B2 109 178 -38 3 1186 207 0 0 0 chr17 78793588 78793611 -16479040 + (TTTAA)n Simple_repeat Simple_repeat 1 23 0 3 1186 784 145 27 27 chr17 78793830 78793979 -16478672 + B1_Mur2 SINE Alu 1 149 0 3 1186 294 271 14 0 chr17 78794178 78794248 -16478403 + ID SINE ID 1 71 -153 3 1186 364 267 20 10 chr17 78794248 78794350 -16478301 + GA-rich Low_complexity Low_complexity 2 104 0 3 1186 410 234 32 0 chr17 78794832 78794926 -16477725 - B3 SINE B2 0 216 120 3 1186 751 305 24 0 chr17 78794971 78795181 -16477470 - MER58A DNA MER1_type 0 224 10 3 1186 29 0 0 0 chr17 78798476 78798505 -16474146 + AT_rich Low_complexity Low_complexity 1 29 0 3 1186 315 309 180 42 chr17 78800739 78801050 -16471601 + MLT1B LTR MaLR 37 390 0 3 1186 529 293 98 69 chr17 78801540 78801917 -16470734 + MLT1B LTR MaLR 3 390 0 3 1186 749 200 14 7 chr17 78803588 78803734 -16468917 + B1_Mur1 SINE Alu 3 149 0 3 1186 730 313 74 27 chr17 78804755 78805093 -16467558 + LTR33 LTR ERVL 44 397 -118 3 1186 22 35 0 0 chr17 78805729 78805758 -16466893 + AT_rich Low_complexity Low_complexity 1 29 0 3 1186 343 178 51 60 chr17 78806125 78806241 -16466410 + PB1D10 SINE Alu 1 117 0 3 1186 216 130 0 0 chr17 78806682 78806728 -16465923 + (CAGA)n Simple_repeat Simple_repeat 4 49 0 3 1186 448 289 86 36 chr17 78806728 78807030 -16465621 + HAL1 LINE L1 1381 1697 -810 3 1186 2368 256 139 16 chr17 78807246 78808086 -16464565 - RCHARR1 DNA MER1_type -29 945 3 3 1186 870 146 0 14 chr17 78808470 78808609 -16464042 + B1_Mus1 SINE Alu 1 137 -11 3 1186 632 258 0 0 chr17 78808984 78809112 -16463539 + ID_B1 SINE B4 83 210 -14 3 1186 23 0 0 0 chr17 78810311 78810334 -16462317 + AT_rich Low_complexity Low_complexity 1 23 0 3 1186 868 222 98 25 chr17 78811463 78811699 -16460952 + B4A SINE B4 40 292 0 3 1186 186 246 0 0 chr17 78811699 78811760 -16460891 + (CA)n Simple_repeat Simple_repeat 1 61 0 3 1186 1222 54 0 0 chr17 78812388 78812535 -16460116 + B1_Mus2 SINE Alu 1 147 0 3 1186 204 189 0 0 chr17 78812645 78812671 -16459980 + polypurine Low_complexity Low_complexity 3 28 0 3 1186 1239 54 0 0 chr17 78812671 78812819 -16459832 + B1_Mus1 SINE Alu 1 148 0 3 1186 516 132 0 0 chr17 78812831 78812914 -16459737 + (GGGA)n Simple_repeat Simple_repeat 4 86 0 3 1186 180 111 0 0 chr17 78813312 78813339 -16459312 + (CTGGGG)n Simple_repeat Simple_repeat 6 32 0 3 1186 1560 185 74 53 chr17 78814128 78814561 -16458090 - RMER10A LTR ERVL 0 442 1 3 1186 850 242 17 0 chr17 78815158 78815336 -16457315 + ID_B1 SINE B4 26 206 -18 3 1186 482 266 24 0 chr17 78815361 78815485 -16457166 + ID_B1 SINE B4 78 204 -20 3 1186 189 0 0 0 chr17 78816029 78816050 -16456601 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1186 297 0 0 0 chr17 78816050 78816083 -16456568 + (GA)n Simple_repeat Simple_repeat 2 34 0 3 1186 180 283 101 28 chr17 78816801 78816910 -16455741 + L2c LINE L2 3270 3386 -1 3 1186 24 53 0 0 chr17 78817128 78817166 -16455485 + GC_rich Low_complexity Low_complexity 1 38 0 3 1186 21 36 0 0 chr17 78817423 78817451 -16455200 + GC_rich Low_complexity Low_complexity 1 28 0 3 1186 339 234 27 0 chr17 78818270 78818381 -16454270 + Lx6 LINE L1 7331 7444 -16 3 1186 273 57 0 0 chr17 78818386 78818421 -16454230 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 1186 782 266 76 19 chr17 78819521 78819732 -16452919 + Lx6 LINE L1 7133 7355 -105 4 1186 315 0 0 0 chr17 78819740 78819775 -16452876 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1186 479 255 27 7 chr17 78820162 78820308 -16452343 + L1MA5 LINE L1 6137 6285 -15 4 1186 565 306 24 30 chr17 78821508 78821673 -16450978 - RSINE1 SINE B4 0 165 2 4 1186 593 192 0 0 chr17 78821731 78821835 -16450816 - B3 SINE B2 -86 130 27 4 1186 1243 34 0 14 chr17 78821875 78822023 -16450628 - B1_Mus1 SINE Alu -2 146 1 4 1186 239 200 0 0 chr17 78822023 78822063 -16450588 - B3 SINE B2 -176 40 1 4 1186 546 310 99 30 chr17 78822750 78823113 -16449538 + MLT1B LTR MaLR 2 389 -1 4 1186 508 270 0 92 chr17 78824948 78825111 -16447540 - B1F2 SINE Alu -1 148 1 4 1186 2241 149 59 13 chr17 78825754 78826127 -16446524 + ORR1B1 LTR MaLR 2 391 -3 4 1186 265 268 28 0 chr17 78826339 78826410 -16446241 - B4A SINE B4 -2 290 218 4 1186 207 0 0 0 chr17 78826449 78826472 -16446179 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 4 1186 746 199 190 16 chr17 78826502 78826686 -16445965 - B3 SINE B2 0 216 1 4 1186 560 251 74 65 chr17 78826696 78826913 -16445738 - B4A SINE B4 -73 219 1 4 1186 266 316 74 20 chr17 78828036 78828239 -16444412 + Arthur1 DNA Tip100 3355 3568 -379 4 1186 2204 190 25 87 chr17 78828245 78828834 -16443817 - Lx7 LINE L1 0 7696 7144 4 1186 1540 62 0 5 chr17 78829102 78829472 -16443179 + (GAA)n Simple_repeat Simple_repeat 1 368 0 4 1186 559 235 29 38 chr17 78829729 78830000 -16442651 + ORR1E LTR MaLR 1 366 -4 4 1186 268 130 10 42 chr17 78830682 78830778 -16441873 + GA-rich Low_complexity Low_complexity 2 94 0 4 1186 259 277 0 98 chr17 78831062 78831174 -16441477 + MTEa LTR MaLR 1 101 -278 4 1186 1090 189 22 27 chr17 78831464 78831687 -16440964 + URR1A DNA MER1_type 1 222 -4 4 1186 2943 153 14 2 chr17 78831687 78832197 -16440454 + L1_Mur2 LINE L1 4847 5362 -515 4 1186 1712 103 38 0 chr17 78832195 78832456 -16440195 - L1_Mm LINE L1 -446 5437 5167 4 1186 3843 237 94 82 chr17 78832477 78833623 -16439028 + Lx5 LINE L1 5872 7031 -19 4 1186 249 33 0 0 chr17 78833624 78833654 -16438997 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 1186 297 152 0 0 chr17 78833929 78833975 -16438676 + RLTR14 LTR ERV1 3 48 -334 4 1186 728 315 94 31 chr17 78834245 78834563 -16438088 + MLT1I LTR MaLR 72 409 -2 4 1186 24 32 0 0 chr17 78834753 78834784 -16437867 + AT_rich Low_complexity Low_complexity 1 31 0 4 1186 365 296 28 0 chr17 78835170 78835278 -16437373 + LTR16D LTR ERVL 220 330 -321 4 1186 1125 225 56 138 chr17 78835824 78836025 -16436626 + MTD LTR MaLR 1 179 -240 4 1186 1241 115 0 20 chr17 78836025 78836220 -16436431 + B2_Mm2 SINE B2 1 191 -4 4 1186 1125 225 56 138 chr17 78836220 78836466 -16436185 + MTD LTR MaLR 180 411 -8 4 1186 282 271 104 24 chr17 78836897 78836925 -16435726 - B4 SINE B4 -68 224 90 4 1186 301 263 21 21 chr17 78836925 78837022 -16435629 - PB1D9 SINE Alu -19 101 5 4 1186 492 281 141 48 chr17 78837301 78837592 -16435059 + ORR1E LTR MaLR 8 325 -34 4 1186 2408 141 100 39 chr17 78837659 78837748 -16434903 - RLTR20A LTR ERVK -1 540 462 4 1186 228 86 0 0 chr17 78837748 78837783 -16434868 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 1186 2408 141 100 39 chr17 78837783 78838201 -16434450 - RLTR20A LTR ERVK -80 461 4 4 1186 673 132 33 8 chr17 78838204 78838326 -16434325 + B1_Mur4 SINE Alu 21 145 -5 4 1186 347 0 23 0 chr17 78838331 78838374 -16434277 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 4 1186 457 304 0 0 chr17 78838444 78838612 -16434039 + CT-rich Low_complexity Low_complexity 3 170 0 4 1186 442 306 0 0 chr17 78838535 78838715 -16433936 + (CAT)n Simple_repeat Simple_repeat 1 180 0 4 1186 384 313 0 27 chr17 78838705 78838889 -16433762 + CT-rich Low_complexity Low_complexity 1 179 0 4 1186 624 260 19 62 chr17 78839077 78839397 -16433254 - Lx7 LINE L1 -1780 5916 5585 4 1186 575 247 65 0 chr17 78839385 78839539 -16433112 + Lx8 LINE L1 6727 6890 -583 4 1186 208 206 0 0 chr17 78839539 78839573 -16433078 + (CAGA)n Simple_repeat Simple_repeat 4 37 0 4 1186 257 216 15 153 chr17 78839573 78839710 -16432941 + Lx8 LINE L1 7356 7473 0 4 1186 226 210 83 48 chr17 78840225 78840370 -16432281 + RMER1C Other Other 398 547 -795 4 1186 280 262 0 48 chr17 78840577 78840661 -16431990 - B1F SINE Alu -10 139 60 4 1186 548 253 99 75 chr17 78841054 78841255 -16431396 - B3 SINE B2 -6 210 5 4 1186 899 61 76 0 chr17 78841331 78841462 -16431189 - B1_Mus1 SINE Alu 0 148 8 4 1186 207 0 0 0 chr17 78841787 78841810 -16430841 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1186 390 208 47 9 chr17 78841814 78841921 -16430730 + RMER1B Other Other 956 1066 0 4 1186 744 167 7 21 chr17 78841955 78842096 -16430555 + B1_Mus1 SINE Alu 10 148 0 4 1186 315 294 0 11 chr17 78842162 78842255 -16430396 - ID_B1 SINE B4 -34 190 99 4 1186 333 236 0 38 chr17 78842361 78842447 -16430204 + Lx9 LINE L1 5838 5921 -379 4 1186 297 345 17 35 chr17 78842483 78842657 -16429994 + L1ME2z LINE L1 6264 6434 -10 4 1186 195 42 0 0 chr17 78843023 78843047 -16429604 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1186 282 303 18 27 chr17 78843170 78843282 -16429369 + MER3 DNA MER1_type 32 142 -67 4 1186 1006 226 255 3 chr17 78843433 78843766 -16428885 + MTD LTR MaLR 2 418 -1 4 1186 227 79 0 26 chr17 78845149 78845188 -16427463 + (TTAA)n Simple_repeat Simple_repeat 1 38 0 4 1186 2073 168 95 33 chr17 78845188 78845639 -16427012 - Lx2B LINE L1 -29 6971 6493 4 1186 7844 80 10 0 chr17 78845734 78847326 -16425325 - L1_Mus1 LINE L1 0 6654 4971 4 1186 255 79 0 0 chr17 78847860 78847898 -16424753 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1186 354 23 0 0 chr17 78847898 78847941 -16424710 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 1186 324 103 0 0 chr17 78848454 78848512 -16424139 + (TTGG)n Simple_repeat Simple_repeat 2 59 0 4 1186 871 268 153 20 chr17 78848560 78848907 -16423744 + MTD LTR MaLR 13 405 -14 4 1186 220 307 58 19 chr17 78849346 78849449 -16423202 + MIR SINE MIR 38 144 -64 4 1186 841 296 119 18 chr17 78849479 78849593 -16423058 - Lx8 LINE L1 0 7473 7342 4 1186 207 0 0 0 chr17 78849593 78849616 -16423035 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 1186 841 296 119 18 chr17 78849616 78849828 -16422823 - Lx8 LINE L1 -132 7341 7114 4 1186 263 151 19 19 chr17 78849931 78849985 -16422666 - ORR1E LTR MaLR -26 333 280 4 1186 401 310 56 26 chr17 78850524 78850756 -16421895 - Charlie26a DNA MER1_type -70 255 17 4 1186 425 292 83 7 chr17 78851603 78851785 -16420866 + Lx9 LINE L1 7155 7441 -203 4 1186 444 19 0 0 chr17 78851785 78851838 -16420813 + (TG)n Simple_repeat Simple_repeat 1 53 0 4 1186 266 330 87 22 chr17 78851838 78851863 -16420788 + Lx9 LINE L1 7326 7348 -125 4 1186 263 237 82 10 chr17 78851848 78851946 -16420705 + Lx9 LINE L1 7532 7636 -8 4 1186 706 177 50 0 chr17 78852166 78852307 -16420344 - B3 SINE B2 -67 149 2 4 1186 302 288 70 0 chr17 78852370 78852495 -16420156 - L1MB2 LINE L1 -299 5875 5736 4 1186 200 137 0 19 chr17 78852716 78852768 -16419883 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1186 331 275 138 7 chr17 78852806 78852976 -16419675 + L1ME1 LINE L1 5670 5858 -321 4 1186 450 0 0 0 chr17 78852976 78853026 -16419625 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1186 246 318 149 8 chr17 78853026 78853112 -16419539 + L1ME1 LINE L1 5859 5960 -219 4 1186 21 0 0 0 chr17 78853366 78853387 -16419264 + AT_rich Low_complexity Low_complexity 1 21 0 4 1186 298 363 77 4 chr17 78854121 78854356 -16418295 + L2 LINE L2 2675 2926 -493 4 1186 231 355 19 9 chr17 78855178 78855286 -16417365 + MER58B DNA MER1_type 1 109 -232 4 1186 21 71 0 0 chr17 78855566 78855608 -16417043 + AT_rich Low_complexity Low_complexity 1 42 0 4 1186 474 249 108 22 chr17 78855837 78856022 -16416629 + RMER5 LTR ERV1 9 209 -325 4 1186 648 246 57 6 chr17 78856094 78856270 -16416381 + RMER5 LTR ERV1 350 534 0 4 1186 637 267 82 26 chr17 78856671 78856902 -16415749 + L1M2 LINE L1 5435 5678 -634 4 1186 395 118 0 13 chr17 78857400 78857477 -16415174 + (CA)n Simple_repeat Simple_repeat 2 77 0 4 1186 2744 27 48 3 chr17 78857563 78857893 -16414758 + L1Md_F2 LINE L1 6234 6578 -4 4 1186 815 113 20 13 chr17 78858392 78858545 -16414106 + (TTCCC)n Simple_repeat Simple_repeat 5 158 0 4 1186 292 265 171 0 chr17 78858569 78858686 -16413965 - B4 SINE B4 -37 255 119 4 1186 280 234 0 38 chr17 78859182 78859262 -16413389 - L1M5 LINE L1 -1572 4574 4498 4 1186 214 167 0 0 chr17 78859297 78859333 -16413318 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 1186 738 290 42 106 chr17 78859353 78859579 -16413072 - B4A SINE B4 0 292 81 4 1186 1056 211 9 5 chr17 78859579 78859793 -16412858 - B3 SINE B2 0 216 2 4 1186 738 290 42 106 chr17 78859793 78859878 -16412773 - B4A SINE B4 -212 80 1 4 1186 1098 120 0 0 chr17 78861288 78861463 -16411188 + (TTCC)n Simple_repeat Simple_repeat 2 176 0 4 1186 383 169 22 0 chr17 78861466 78861555 -16411096 + CT-rich Low_complexity Low_complexity 2 92 0 4 1186 756 163 18 6 chr17 78861580 78861747 -16410904 + CT-rich Low_complexity Low_complexity 4 172 0 4 1186 4147 172 31 25 chr17 78861748 78862603 -16410048 - RMER1A Other Other -1 1029 271 4 1186 392 0 21 0 chr17 78864207 78864255 -16408396 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 1186 544 239 0 8 chr17 78864272 78864390 -16408261 - RSINE1 SINE B4 -47 118 2 4 1186 878 68 8 8 chr17 78865993 78866127 -16406524 - L1Md_F2 LINE L1 -1 6581 6448 4 1186 1748 48 9 0 chr17 78866128 78866338 -16406313 + L1Md_F2 LINE L1 6230 6441 -141 4 1186 8044 60 0 5 chr17 78866739 78867928 -16404723 + L1_Mus1 LINE L1 5390 6654 0 4 1186 189 0 0 0 chr17 78868028 78868049 -16404602 + (CAA)n Simple_repeat Simple_repeat 1 21 0 4 1186 1452 88 0 5 chr17 78868539 78868734 -16403917 - B2_Mm2 SINE B2 -1 194 1 4 1186 213 39 0 0 chr17 78869028 78869054 -16403597 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1186 419 301 23 0 chr17 78869553 78869686 -16402965 - ID_B1 SINE B4 -1 223 88 4 1186 486 153 0 0 chr17 78869849 78869960 -16402691 + CT-rich Low_complexity Low_complexity 2 112 0 4 1186 2273 101 62 37 chr17 78870037 78870438 -16402213 - IAPLTR2a LTR ERVK 0 411 1 5 1186 8714 38 62 0 chr17 78870438 78871527 -16401124 - IAPEz-int LTR ERVK 0 6481 5325 5 1186 35659 5 8 11 chr17 78871527 78875454 -16397197 - IAPEz-int LTR ERVK -2566 3915 1 5 1186 2036 103 64 38 chr17 78875455 78875848 -16396803 - IAPLTR2a LTR ERVK -8 403 1 5 1186 655 303 61 76 chr17 78875848 78876111 -16396540 - B4A SINE B4 -31 261 3 5 1186 223 254 0 0 chr17 78876113 78876180 -16396471 + T-rich Low_complexity Low_complexity 1 67 0 5 1186 366 73 0 18 chr17 78876189 78876245 -16396406 - ORR1B1 LTR MaLR 0 394 340 5 1186 1902 112 145 13 chr17 78876245 78876563 -16396088 - Lx LINE L1 -5 6649 6290 5 1186 796 118 104 0 chr17 78876563 78876707 -16395944 - ORR1B1 LTR MaLR -46 348 190 5 1186 583 274 59 30 chr17 78876713 78876916 -16395735 + B3 SINE B2 1 209 -7 5 1186 1504 268 34 16 chr17 78876974 78877285 -16395366 + L1MB7 LINE L1 5491 5812 -372 5 1186 1865 168 104 0 chr17 78877285 78877631 -16395020 - ORR1C2 LTR MaLR 0 384 3 5 1186 1504 268 34 16 chr17 78877631 78877816 -16394835 + L1MB7 LINE L1 5813 5996 -188 5 1186 5226 61 15 6 chr17 78877887 78878560 -16394091 + L1_Mus1 LINE L1 5888 6566 -1 5 1186 387 102 54 1 chr17 78878631 78878715 -16393936 + L1_Mus1 LINE L1 6246 6330 -236 5 1186 24 32 0 0 chr17 78878783 78878814 -16393837 + AT_rich Low_complexity Low_complexity 1 31 0 5 1186 243 0 0 0 chr17 78879067 78879094 -16393557 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1186 342 216 261 0 chr17 78879122 78879210 -16393441 - B1_Mur2 SINE Alu -36 113 3 5 1186 639 198 0 45 chr17 78880692 78880824 -16391827 - RSINE1 SINE B4 -37 128 3 5 1186 345 100 0 0 chr17 78880825 78880875 -16391776 + (CAT)n Simple_repeat Simple_repeat 2 51 0 5 1186 610 245 30 59 chr17 78882437 78882606 -16390045 - RSINE1 SINE B4 0 165 2 5 1186 279 247 41 0 chr17 78883378 78883451 -16389200 - L1MD1 LINE L1 -84 6158 6083 5 1186 248 275 78 42 chr17 78883459 78883626 -16389025 - L1MEf LINE L1 -4419 1781 1609 5 1186 675 257 66 51 chr17 78883633 78883830 -16388821 + B3 SINE B2 2 201 -15 5 1186 822 233 104 109 chr17 78883880 78884275 -16388376 + RLTR9C LTR ERVK 1 393 0 5 1186 495 294 25 79 chr17 78884278 78884481 -16388170 + B3A SINE B2 2 193 -5 5 1186 15216 106 10 6 chr17 78884486 78887291 -16385360 + L1VL4 LINE L1 207 3022 -537 5 1186 37 0 0 0 chr17 78887291 78887328 -16385323 + AT_rich Low_complexity Low_complexity 1 37 0 5 1186 2376 49 7 0 chr17 78887328 78887612 -16385039 - L1_Mus1 LINE L1 -203 6364 6079 5 1186 15148 122 12 12 chr17 78887612 78890877 -16381774 + L1_Mus4 LINE L1 3362 6624 -12 5 1186 21 0 0 0 chr17 78892452 78892473 -16380178 + AT_rich Low_complexity Low_complexity 1 21 0 5 1186 222 218 0 0 chr17 78892880 78892935 -16379716 + A-rich Low_complexity Low_complexity 1 55 0 5 1186 296 296 122 34 chr17 78893222 78893460 -16379191 - L1MEc LINE L1 -4939 1461 1203 5 1186 324 70 0 0 chr17 78894248 78894291 -16378360 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 5 1186 1236 38 6 0 chr17 78894291 78894450 -16378201 - B2_Mm1a SINE B2 -33 160 1 5 1186 453 267 10 19 chr17 78895202 78895305 -16377346 + PB1D10 SINE Alu 7 108 -9 5 1186 738 284 65 20 chr17 78896470 78896811 -16375840 + L1MB7 LINE L1 5792 6147 -37 5 1186 485 168 8 0 chr17 78896875 78897006 -16375645 + (CA)n Simple_repeat Simple_repeat 2 133 0 5 1186 767 334 49 35 chr17 78897124 78897490 -16375161 - MLT1A LTR MaLR 0 374 4 5 1186 606 233 94 6 chr17 78898209 78898369 -16374282 + B3 SINE B2 1 174 -42 5 1186 291 28 0 0 chr17 78898371 78898407 -16374244 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1186 449 148 172 69 chr17 78898552 78898668 -16373983 + B1F SINE Alu 16 143 -6 5 1186 233 244 85 85 chr17 78898554 78898684 -16373967 + B4A SINE B4 105 234 -58 5 1186 1233 33 0 0 chr17 78898692 78898842 -16373809 + (GGGA)n Simple_repeat Simple_repeat 1 150 0 5 1186 228 260 27 14 chr17 78898998 78899072 -16373579 - ID4_ SINE ID -4 79 5 5 1186 335 276 86 8 chr17 78899655 78899783 -16372868 + MLT1A1 LTR MaLR 19 156 -252 5 1186 403 309 0 8 chr17 78899783 78899907 -16372744 + PB1 SINE Alu 1 123 -4 5 1186 387 105 0 0 chr17 78900385 78900442 -16372209 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1186 252 0 0 0 chr17 78901229 78901257 -16371394 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1186 320 344 47 39 chr17 78901537 78901794 -16370857 - L1MC4 LINE L1 0 7995 7737 5 1186 261 272 28 37 chr17 78901975 78902082 -16370569 - L1MC4 LINE L1 -639 7403 7298 5 1186 673 152 21 0 chr17 78902147 78902287 -16370364 + B1_Mus1 SINE Alu 1 150 0 5 1186 377 276 95 53 chr17 78902297 78902561 -16370090 - L1MC4 LINE L1 -879 7163 6889 5 1186 3355 152 8 2 chr17 78902576 78903097 -16369554 - Lx5 LINE L1 -197 6853 6330 5 1186 370 191 146 0 chr17 78903254 78903343 -16369308 - PB1D9 SINE Alu -14 106 5 5 1186 189 0 0 0 chr17 78903694 78903715 -16368936 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 5 1186 1107 51 0 0 chr17 78903715 78903852 -16368799 - B1_Mus1 SINE Alu -10 138 2 5 1187 282 95 0 0 chr17 78905582 78905624 -16367027 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1187 715 245 6 13 chr17 78905820 78905977 -16366674 - ID_B1 SINE B4 -17 207 52 5 1187 1088 93 12 0 chr17 78906241 78906403 -16366248 + (GAAA)n Simple_repeat Simple_repeat 1 164 0 5 1187 432 37 0 0 chr17 78907398 78907452 -16365199 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 1187 327 132 0 0 chr17 78908690 78908758 -16363893 + (TC)n Simple_repeat Simple_repeat 1 68 0 5 1187 378 0 0 0 chr17 78908758 78908800 -16363851 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1187 669 47 0 0 chr17 78909813 78909898 -16362753 + (TC)n Simple_repeat Simple_repeat 2 86 0 5 1187 477 0 0 0 chr17 78909898 78909950 -16362701 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1187 1567 184 124 16 chr17 78909951 78910315 -16362336 + MTD LTR MaLR 17 419 0 5 1187 360 0 0 0 chr17 78910370 78910410 -16362241 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1187 186 301 27 27 chr17 78910649 78910724 -16361927 + MIR SINE MIR 110 184 -78 5 1187 7674 105 11 11 chr17 78910786 78912623 -16360028 - L1_Mus4 LINE L1 0 6636 4835 5 1187 6337 96 17 9 chr17 78912606 78913710 -16358941 - L1VL4 LINE L1 -2396 1163 48 5 1187 1443 176 14 14 chr17 78913799 78914075 -16358576 - Lx2 LINE L1 -3 6994 6719 5 1187 620 236 6 3 chr17 78914509 78914868 -16357783 + (CA)n Simple_repeat Simple_repeat 1 360 0 5 1187 235 323 40 20 chr17 78915856 78915957 -16356694 - MLT1A1 LTR MaLR -297 111 9 5 1187 626 285 46 10 chr17 78916015 78916210 -16356441 - MLT1A0 LTR MaLR -2 363 162 5 1187 547 316 114 18 chr17 78916229 78916448 -16356203 - B4A SINE B4 -52 240 1 5 1187 243 274 52 88 chr17 78916452 78916588 -16356063 - MLT1A0 LTR MaLR -234 131 1 5 1187 182 326 32 0 chr17 78916801 78916896 -16355755 - MIRb SINE MIR -57 211 114 5 1187 867 151 14 0 chr17 78917192 78917338 -16355313 + B1_Mus1 SINE Alu 1 148 0 5 1187 928 103 29 0 chr17 78918007 78918181 -16354470 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 1187 232 358 48 43 chr17 78918779 78918989 -16353662 - LTR78 LTR ERV1 -405 899 689 5 1187 225 167 0 40 chr17 78919115 78919165 -16353486 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 5 1187 683 250 0 0 chr17 78919172 78919312 -16353339 - B1F2 SINE Alu -8 141 2 5 1187 290 263 29 39 chr17 78920328 78920431 -16352220 + PB1 SINE Alu 17 118 -9 5 1187 206 62 0 30 chr17 78920434 78920467 -16352184 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 5 1187 208 0 62 0 chr17 78921356 78921388 -16351263 + (CCCCCA)n Simple_repeat Simple_repeat 3 36 0 5 1187 458 241 8 8 chr17 78921771 78921888 -16350763 + B3A SINE B2 3 119 -79 5 1187 350 252 60 52 chr17 78922113 78922247 -16350404 - MER20 DNA MER1_type -47 172 38 5 1187 22 0 0 0 chr17 78922497 78922519 -16350132 + AT_rich Low_complexity Low_complexity 1 22 0 5 1187 573 15 0 0 chr17 78922721 78922787 -16349864 + (TC)n Simple_repeat Simple_repeat 2 67 0 5 1187 690 296 4 9 chr17 78923146 78923378 -16349273 + B4 SINE B4 1 231 -61 5 1187 2098 182 11 5 chr17 78924591 78924966 -16347685 + Lx4B LINE L1 6661 7037 -21 5 1187 625 34 23 0 chr17 78924966 78925054 -16347597 + (CATA)n Simple_repeat Simple_repeat 3 92 0 5 1187 838 21 0 0 chr17 78925198 78925294 -16347357 - L1_Mus1 LINE L1 -449 6118 6023 5 1187 3576 49 0 2 chr17 78925294 78925724 -16346927 + L1_Mus1 LINE L1 6139 6567 0 5 1187 1189 191 44 18 chr17 78926085 78926357 -16346294 + RMER4B LTR ERVK 17 295 -290 5 1187 217 0 0 131 chr17 78926393 78926477 -16346174 + (CTG)n Simple_repeat Simple_repeat 2 74 0 5 1187 192 386 0 0 chr17 78927831 78927901 -16344750 + MIRm SINE MIR 89 158 -118 5 1187 772 156 96 0 chr17 78927901 78928036 -16344615 + B1_Mus1 SINE Alu 1 148 0 5 1187 765 125 0 0 chr17 78928341 78928461 -16344190 + (GGA)n Simple_repeat Simple_repeat 1 120 0 5 1187 1101 196 14 9 chr17 78928530 78928752 -16343899 + Lx4B LINE L1 6551 6773 -285 5 1187 374 255 32 82 chr17 78928749 78928907 -16343744 + Lx4B LINE L1 6904 7053 -5 5 1187 765 214 250 34 chr17 78928944 78929264 -16343387 + MTD LTR MaLR 1 389 -30 5 1187 266 0 29 0 chr17 78929267 78929301 -16343350 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1187 1125 66 0 0 chr17 78929301 78929438 -16343213 - B1_Mm SINE Alu -9 138 2 5 1187 4420 48 2 0 chr17 78929438 78929957 -16342694 - L1_Mus1 LINE L1 -10 6557 6038 5 1187 584 324 62 54 chr17 78930953 78931435 -16341216 - L2a LINE L2 -85 3341 2873 5 1187 184 281 73 0 chr17 78931536 78931632 -16341019 - L2a LINE L2 -700 2719 2617 5 1187 639 0 0 0 chr17 78931656 78931727 -16340924 + (GA)n Simple_repeat Simple_repeat 1 71 0 5 1187 2434 84 22 0 chr17 78932112 78932432 -16340219 - ORR1A2 LTR MaLR 0 327 1 5 1187 495 189 0 0 chr17 78933263 78933353 -16339298 - 5S rRNA rRNA -31 90 1 5 1187 242 127 35 52 chr17 78933388 78933446 -16339205 + MER5A1 DNA MER1_type 87 143 -23 5 1187 273 286 85 9 chr17 78933523 78933629 -16339022 - MER5B DNA MER1_type -57 121 8 6 1187 207 0 0 0 chr17 78934115 78934138 -16338513 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1187 946 308 81 44 chr17 78934552 78935005 -16337646 - MLT1C LTR MaLR 0 467 6 6 1187 385 324 45 65 chr17 78935203 78935556 -16337095 - ORR1E LTR MaLR -5 354 9 6 1187 5818 120 76 20 chr17 78935618 78936569 -16336082 - L1_Mus1 LINE L1 0 6567 5587 6 1187 1291 293 100 22 chr17 78936569 78937078 -16335573 - MTE-int LTR MaLR -144 1436 888 6 1187 272 290 10 41 chr17 78937104 78937201 -16335450 - MTE-int LTR MaLR -741 839 746 6 1187 1037 296 38 15 chr17 78937391 78937734 -16334917 - ORR1E LTR MaLR -8 351 1 6 1187 1083 254 126 17 chr17 78937736 78938262 -16334389 + L1MA9 LINE L1 4746 5331 -812 6 1187 1305 83 0 0 chr17 78938275 78938455 -16334196 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 6 1187 395 285 64 126 chr17 78938492 78938782 -16333869 + L1MA9 LINE L1 5440 5704 -587 6 1187 647 274 6 6 chr17 78938801 78938977 -16333674 + Lx8 LINE L1 6990 7165 -308 6 1187 2009 249 11 25 chr17 78939276 78939754 -16332897 + Lx8 LINE L1 6406 6876 -597 6 1187 447 19 0 0 chr17 78939798 78939850 -16332801 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 1187 299 294 0 0 chr17 78939862 78939930 -16332721 + B4A SINE B4 222 289 -3 6 1187 639 172 0 0 chr17 78939981 78940018 -16332633 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 1187 435 38 0 0 chr17 78940018 78940071 -16332580 + (CAGG)n Simple_repeat Simple_repeat 4 56 0 6 1187 639 172 0 0 chr17 78940071 78940213 -16332438 + (CA)n Simple_repeat Simple_repeat 2 143 0 6 1187 368 265 0 20 chr17 78940338 78940438 -16332213 + L1MA9 LINE L1 6052 6149 -163 6 1187 477 138 0 0 chr17 78940438 78940532 -16332119 + (TC)n Simple_repeat Simple_repeat 1 94 0 6 1187 732 23 0 0 chr17 78940540 78940626 -16332025 + (TG)n Simple_repeat Simple_repeat 1 86 0 6 1187 234 284 86 0 chr17 78940626 78940742 -16331909 + L1MA9 LINE L1 6179 6304 -8 6 1187 621 259 66 6 chr17 78940761 78940928 -16331723 - B3A SINE B2 -20 178 2 6 1187 460 283 62 33 chr17 78941894 78942146 -16330505 - L1M5 LINE L1 -359 5765 5500 6 1187 734 237 41 31 chr17 78942874 78943070 -16329581 - B4A SINE B4 -94 198 1 6 1187 405 0 0 0 chr17 78944004 78944049 -16328602 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 1187 391 289 106 0 chr17 78944074 78944178 -16328473 - PB1D10 SINE Alu 0 117 3 6 1187 336 260 144 10 chr17 78944096 78944193 -16328458 - ID_B1 SINE B4 -48 176 67 6 1187 423 226 0 0 chr17 78944646 78944748 -16327903 + (TA)n Simple_repeat Simple_repeat 2 103 0 6 1187 4326 269 124 33 chr17 78946343 78947035 -16325616 + ORR1E-int LTR MaLR 24 756 -824 6 1187 993 58 0 0 chr17 78947035 78947172 -16325479 + (GTTTG)n Simple_repeat Simple_repeat 3 139 0 6 1187 4326 269 124 33 chr17 78947172 78947876 -16324775 + ORR1E-int LTR MaLR 757 1547 -33 6 1187 633 317 86 29 chr17 78947861 78948012 -16324639 + ORR1E LTR MaLR 6 153 -206 6 1187 423 38 0 0 chr17 78948012 78948065 -16324586 + (GA)n Simple_repeat Simple_repeat 2 54 0 6 1187 633 317 86 29 chr17 78948065 78948192 -16324459 + ORR1E LTR MaLR 154 299 -60 6 1187 1033 86 0 7 chr17 78948557 78948698 -16323953 - B1_Mus1 SINE Alu 0 148 9 6 1187 291 205 191 12 chr17 78949169 78949253 -16323398 - MLT1J LTR MaLR -176 336 238 6 1187 264 59 0 0 chr17 78949264 78949298 -16323353 + (TC)n Simple_repeat Simple_repeat 1 34 0 6 1187 441 0 0 0 chr17 78949300 78949349 -16323302 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1187 204 419 39 0 chr17 78950396 78950525 -16322126 - L2b LINE L2 0 3375 3242 6 1187 470 294 0 0 chr17 78950783 78950885 -16321766 + PB1D10 SINE Alu 2 103 -14 6 1187 241 303 22 33 chr17 78951057 78951149 -16321502 - MLT1N2 LTR MaLR -9 553 463 6 1187 314 269 212 15 chr17 78951995 78952127 -16320524 + MER5A DNA MER1_type 6 163 -26 6 1187 389 369 140 64 chr17 78953172 78953659 -16318992 - MamGypLTR1b LTR Gypsy -252 530 7 6 1187 508 130 0 6 chr17 78956146 78956227 -16316424 + B1F2 SINE Alu 2 79 -70 6 1187 226 338 105 23 chr17 78956228 78956361 -16316290 - LTR85a LTR Gypsy? -7 695 552 6 1187 278 329 69 73 chr17 78956974 78957118 -16315533 - L2 LINE L2 -529 2890 2750 6 1187 200 35 35 0 chr17 78957118 78957147 -16315504 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 6 1187 278 329 69 73 chr17 78957147 78957235 -16315416 - L2 LINE L2 -670 2749 2659 6 1187 274 231 0 44 chr17 78957310 78957378 -16315273 - L2a LINE L2 -69 3357 3293 6 1187 5648 108 3 0 chr17 78957496 78958388 -16314263 - Lx LINE L1 -749 5905 5012 6 1187 5278 89 37 1 chr17 78958388 78959117 -16313534 + Lx LINE L1 5900 6654 0 6 1187 392 230 60 34 chr17 78959793 78959910 -16312741 - PB1D7 SINE Alu 0 120 1 6 1187 1046 157 123 25 chr17 78960029 78960232 -16312419 + URR1A DNA MER1_type 1 223 -3 6 1187 414 91 39 0 chr17 78960594 78960671 -16311980 + (TCCC)n Simple_repeat Simple_repeat 3 82 0 6 1187 184 313 58 46 chr17 78960924 78961011 -16311640 + L3 LINE CR1 4203 4290 -199 6 1187 207 0 0 0 chr17 78961028 78961051 -16311600 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1187 189 0 0 0 chr17 78961368 78961389 -16311262 + (GA)n Simple_repeat Simple_repeat 1 21 0 6 1187 1250 34 0 0 chr17 78961822 78961968 -16310683 + B1_Mm SINE Alu 2 147 0 6 1187 276 53 0 0 chr17 78961968 78962006 -16310645 + (A)n Simple_repeat Simple_repeat 1 38 0 6 1187 386 218 176 10 chr17 78962870 78962972 -16309679 - B1_Mur1 SINE Alu -22 127 9 6 1187 1119 279 64 9 chr17 78962989 78963333 -16309318 - RCHARR1 DNA MER1_type -2 972 610 6 1187 766 278 14 41 chr17 78963337 78963558 -16309093 + B3 SINE B2 2 216 0 6 1187 254 258 0 70 chr17 78963597 78963668 -16308983 - PB1D9 SINE Alu -1 148 62 6 1187 209 108 0 26 chr17 78963707 78963730 -16308921 + (TTC)n Simple_repeat Simple_repeat 3 25 0 6 1187 1179 117 0 0 chr17 78963730 78963910 -16308741 + (TCC)n Simple_repeat Simple_repeat 1 180 0 6 1187 1116 127 0 2 chr17 78963910 78964104 -16308547 + (TTC)n Simple_repeat Simple_repeat 1 193 0 6 1187 1468 32 11 11 chr17 78964104 78964293 -16308358 - L1_Mus3 LINE L1 -12 6626 6438 6 1187 1035 89 0 14 chr17 78964293 78964441 -16308210 + L1_Mus3 LINE L1 6263 6408 -230 6 1187 182 0 0 97 chr17 78964468 78964499 -16308152 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 6 1187 24 55 0 18 chr17 78965717 78965742 -16306909 + AT_rich Low_complexity Low_complexity 1 25 0 6 1187 1188 88 0 0 chr17 78965742 78965890 -16306761 - B1_Mus1 SINE Alu 0 148 1 6 1187 24 55 0 18 chr17 78965890 78965920 -16306731 + AT_rich Low_complexity Low_complexity 1 30 0 6 1187 393 305 21 0 chr17 78966757 78966852 -16305799 + ID_B1 SINE B4 128 224 0 6 1187 341 280 218 8 chr17 78967554 78967628 -16305023 + HAL1-3A_ME LINE L1 2284 2385 -473 6 1187 1349 61 0 6 chr17 78967628 78967809 -16304842 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 6 1187 341 280 218 8 chr17 78967809 78967867 -16304784 + HAL1-3A_ME LINE L1 2386 2443 -415 6 1187 1389 55 0 0 chr17 78967869 78968086 -16304565 + (GAAA)n Simple_repeat Simple_repeat 1 217 0 6 1187 343 324 69 68 chr17 78968852 78969085 -16303566 - B4 SINE B4 -14 278 67 6 1187 864 152 0 0 chr17 78969354 78969505 -16303146 + GA-rich Low_complexity Low_complexity 2 152 0 6 1187 217 200 0 0 chr17 78969507 78969542 -16303109 + G-rich Low_complexity Low_complexity 5 39 0 6 1187 1074 67 42 0 chr17 78969542 78969707 -16302944 + (GAAAA)n Simple_repeat Simple_repeat 5 176 0 6 1187 1116 199 25 0 chr17 78970281 78970482 -16302169 + B3 SINE B2 1 206 -10 6 1187 311 27 0 0 chr17 78970506 78970543 -16302108 - tRNA-Arg-AGA tRNA tRNA -39 37 1 6 1187 25 0 0 0 chr17 78970554 78970579 -16302072 + AT_rich Low_complexity Low_complexity 1 25 0 6 1187 365 198 0 11 chr17 78971464 78971494 -16301157 + polypyrimidine Low_complexity Low_complexity 64 93 0 6 1187 1347 75 3 0 chr17 78971494 78971855 -16300796 + (TCC)n Simple_repeat Simple_repeat 1 362 0 6 1187 365 198 0 11 chr17 78971855 78971912 -16300739 + polypyrimidine Low_complexity Low_complexity 8 63 0 6 1187 299 268 0 35 chr17 78971925 78972010 -16300641 - ID4_ SINE ID 0 83 2 6 1187 349 258 30 101 chr17 78972185 78972284 -16300367 + PB1 SINE Alu 10 101 -19 6 1187 227 195 191 83 chr17 78972308 78972320 -16300331 + ID_B1 SINE B4 122 214 -10 6 1187 282 209 0 69 chr17 78972320 78972392 -16300259 + B1_Mur1 SINE Alu 73 139 -10 6 1187 693 36 0 0 chr17 78972392 78972476 -16300175 + (GGAA)n Simple_repeat Simple_repeat 3 86 0 6 1187 361 245 115 19 chr17 78972492 78972596 -16300055 + PB1D9 SINE Alu 2 115 -5 6 1187 21 0 0 0 chr17 78972602 78972623 -16300028 + AT_rich Low_complexity Low_complexity 1 21 0 6 1187 1282 34 0 0 chr17 78972635 78972781 -16299870 + B1_Mus2 SINE Alu 2 147 0 6 1187 653 115 0 0 chr17 78973009 78973105 -16299546 - B1_Mur4 SINE Alu -13 137 42 6 1187 223 115 0 55 chr17 78973115 78973170 -16299481 + C-rich Low_complexity Low_complexity 2 53 0 6 1187 189 195 0 0 chr17 78973363 78973404 -16299247 + (TTG)n Simple_repeat Simple_repeat 2 42 0 6 1187 327 218 33 119 chr17 78973902 78974053 -16298598 - L1MC4 LINE L1 -1 8041 7925 6 1187 1072 205 34 5 chr17 78974477 78974683 -16297968 - B3 SINE B2 -4 212 1 6 1187 577 311 82 10 chr17 78974967 78975259 -16297392 - MER2 DNA MER2_type -32 313 1 6 1187 317 293 101 92 chr17 78975263 78975470 -16297181 - L1MC4 LINE L1 -864 7178 6970 6 1187 346 255 22 18 chr17 78977050 78977176 -16295475 + ID4 SINE ID 2 127 -25 6 1187 740 215 7 14 chr17 78977443 78977589 -16295062 + B3A SINE B2 1 145 -53 6 1187 1221 82 0 0 chr17 78977589 78977760 -16294891 + (GA)n Simple_repeat Simple_repeat 2 172 0 6 1187 924 59 0 0 chr17 78978569 78978688 -16293963 + (TTTC)n Simple_repeat Simple_repeat 2 120 0 6 1187 427 360 57 20 chr17 78979457 78979704 -16292947 - MIR SINE MIR -3 259 4 6 1187 348 24 0 0 chr17 78982067 78982108 -16290543 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1187 195 374 52 39 chr17 78982238 78982391 -16290260 + MIRb SINE MIR 25 179 -89 6 1187 189 336 70 9 chr17 78982651 78982765 -16289886 - MIRb SINE MIR -12 256 136 6 1187 225 0 0 0 chr17 78983985 78984010 -16288641 + (TTG)n Simple_repeat Simple_repeat 2 26 0 6 1187 441 300 53 95 chr17 78984333 78984576 -16288075 + MLT1D LTR MaLR 1 233 -272 7 1187 396 358 16 33 chr17 78984607 78984789 -16287862 + MLT1D LTR MaLR 322 500 -5 7 1187 915 202 10 55 chr17 78985067 78985266 -16287385 + B3A SINE B2 9 198 0 7 1187 187 246 0 122 chr17 78986364 78986438 -16286213 - L4 LINE RTE -256 1773 1709 7 1187 184 321 53 111 chr17 78986947 78987136 -16285515 - MIR SINE MIR -46 216 39 7 1187 1021 186 59 54 chr17 78988252 78988474 -16284177 + URR1B DNA MER1_type 3 225 0 7 1187 226 316 26 0 chr17 78988996 78989072 -16283579 - L2a LINE L2 -4 3422 3345 7 1187 911 198 141 10 chr17 78989232 78989431 -16283220 - URR1A DNA MER1_type -1 225 1 7 1187 1286 20 0 7 chr17 78989751 78989899 -16282752 + B1_Mm SINE Alu 1 147 0 7 1187 336 293 27 101 chr17 78990148 78990296 -16282355 + L1M5 LINE L1 5297 5433 -691 7 1187 308 295 6 43 chr17 78990505 78990668 -16281983 + L1MA4A LINE L1 5770 5926 -377 7 1187 1547 188 41 25 chr17 78990864 78991230 -16281421 - RMER17B LTR ERVK 0 958 587 7 1187 1216 163 134 37 chr17 78991241 78991509 -16281142 - RMER17B LTR ERVK -660 298 5 7 1187 221 119 0 23 chr17 78992336 78992379 -16280272 + (ATTG)n Simple_repeat Simple_repeat 3 44 0 7 1187 211 200 0 0 chr17 78992391 78992426 -16280225 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 7 1187 1113 174 14 63 chr17 78993365 78993586 -16279065 - B3 SINE B2 -6 210 1 7 1187 408 20 0 0 chr17 78993637 78993686 -16278965 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 1187 1277 248 87 14 chr17 78994587 78994943 -16277708 + MTD LTR MaLR 23 404 -15 7 1187 275 177 134 13 chr17 78995170 78995319 -16277332 + (CATGT)n Simple_repeat Simple_repeat 1 167 0 7 1187 253 228 105 0 chr17 78995554 78995800 -16276851 + (CATGT)n Simple_repeat Simple_repeat 1 271 0 7 1187 424 138 37 0 chr17 78997071 78997180 -16275471 + (TCTG)n Simple_repeat Simple_repeat 4 116 0 7 1187 675 158 0 0 chr17 78997199 78997326 -16275325 + (TGGA)n Simple_repeat Simple_repeat 2 128 0 7 1187 222 331 161 0 chr17 78997385 78997509 -16275142 + MIR SINE MIR 112 255 -7 7 1187 402 74 0 0 chr17 78998358 78998412 -16274239 + (TA)n Simple_repeat Simple_repeat 2 55 0 7 1187 779 145 94 0 chr17 78998425 78998563 -16274088 - MTC LTR MaLR -270 151 1 7 1187 794 188 14 0 chr17 78999547 78999685 -16272966 + B1_Mur1 SINE Alu 2 141 -8 7 1187 35 0 0 0 chr17 78999686 78999721 -16272930 + AT_rich Low_complexity Low_complexity 1 35 0 7 1187 660 102 0 0 chr17 78999731 78999819 -16272832 + B1_Mus2 SINE Alu 1 88 -59 7 1187 190 0 32 32 chr17 78999828 78999859 -16272792 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 1187 780 159 0 0 chr17 78999860 78999998 -16272653 + GA-rich Low_complexity Low_complexity 4 141 0 7 1187 369 0 0 0 chr17 79000000 79000041 -16272610 + (GGAA)n Simple_repeat Simple_repeat 4 44 0 1 1187 225 0 0 0 chr17 79000070 79000095 -16272556 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 1187 306 0 0 0 chr17 79000195 79000229 -16272422 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 1187 510 17 0 0 chr17 79000365 79000424 -16272227 + (GA)n Simple_repeat Simple_repeat 1 59 0 4 1187 388 204 10 39 chr17 79002872 79002974 -16269677 + BC1_Mm scRNA scRNA 1 99 -53 5 1187 506 273 89 32 chr17 79004323 79004569 -16268082 + MER44A DNA MER2_type 1 260 -79 6 1187 22 56 0 0 chr17 79004645 79004681 -16267970 + AT_rich Low_complexity Low_complexity 1 36 0 7 1187 252 0 0 0 chr17 79005010 79005038 -16267613 + (A)n Simple_repeat Simple_repeat 1 28 0 8 1187 2631 77 0 0 chr17 79006552 79006879 -16265772 - ORR1A2 LTR MaLR 0 327 1 9 1187 402 291 95 22 chr17 79007528 79007707 -16264944 + MIR3 SINE MIR 9 200 -8 1 1187 509 289 78 41 chr17 79008057 79008299 -16264352 - MLT2B3 LTR ERVL 0 554 304 1 1187 25 31 0 0 chr17 79008392 79008424 -16264227 + AT_rich Low_complexity Low_complexity 1 32 0 1 1187 513 0 0 0 chr17 79008424 79008481 -16264170 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1187 387 289 28 28 chr17 79008506 79008613 -16264038 - RSINE1 SINE B4 -33 132 26 1 1187 450 0 0 0 chr17 79009036 79009086 -16263565 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1187 997 54 100 0 chr17 79009108 79009238 -16263413 + B1_Mm SINE Alu 5 147 0 1 1187 225 0 0 0 chr17 79009238 79009263 -16263388 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1187 211 328 100 46 chr17 79011315 79011555 -16261096 + B4 SINE B4 24 276 -16 1 1187 180 77 0 0 chr17 79011625 79011651 -16261000 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1187 606 257 0 0 chr17 79011716 79011852 -16260799 + MT2A LTR ERVL 1 136 -397 2 1187 558 0 0 0 chr17 79014372 79014434 -16258217 + (TC)n Simple_repeat Simple_repeat 2 63 0 2 1187 279 0 0 0 chr17 79014434 79014464 -16258187 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1187 539 211 113 0 chr17 79014985 79015118 -16257533 + B1_Mur1 SINE Alu 2 149 0 2 1187 393 300 172 50 chr17 79015165 79015502 -16257149 - MTE2a LTR MaLR -1 378 1 2 1187 192 179 0 0 chr17 79016799 79016838 -16255813 + (TTCA)n Simple_repeat Simple_repeat 2 40 0 2 1187 231 311 0 0 chr17 79016897 79016971 -16255680 - ID2 SINE ID -9 74 1 2 1187 319 218 88 10 chr17 79017551 79017653 -16254998 - MER45A DNA Tip100 -43 135 26 2 1187 188 211 88 50 chr17 79018229 79018309 -16254342 - MIRm SINE MIR -152 124 42 2 1187 522 0 0 0 chr17 79020340 79020398 -16252253 + (GA)n Simple_repeat Simple_repeat 2 59 0 2 1187 206 135 27 0 chr17 79021077 79021114 -16251537 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1187 560 165 9 0 chr17 79021738 79021853 -16250798 + (TA)n Simple_repeat Simple_repeat 2 117 0 3 1187 359 202 0 11 chr17 79022509 79022599 -16250052 + (CA)n Simple_repeat Simple_repeat 2 90 0 3 1187 840 233 62 0 chr17 79024715 79024908 -16247743 + B3 SINE B2 1 205 -11 3 1187 636 14 0 0 chr17 79024915 79024988 -16247663 + (TTC)n Simple_repeat Simple_repeat 3 75 0 3 1187 359 100 0 32 chr17 79024988 79025050 -16247601 + (CCCCCT)n Simple_repeat Simple_repeat 1 60 0 3 1187 405 264 41 91 chr17 79025381 79025502 -16247149 - PB1D10 SINE Alu 0 117 3 3 1187 1228 133 64 5 chr17 79025529 79025748 -16246903 - ORR1B2 LTR MaLR -7 360 129 3 1187 231 309 53 86 chr17 79025742 79025894 -16246757 - MLT1C LTR MaLR -295 172 26 3 1187 206 265 0 0 chr17 79026643 79026692 -16245959 + T-rich Low_complexity Low_complexity 1 49 0 3 1187 225 0 0 0 chr17 79026815 79026840 -16245811 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 4 1187 274 235 200 20 chr17 79026971 79027071 -16245580 + PB1 SINE Alu 5 122 -5 4 1187 261 207 53 181 chr17 79027168 79027241 -16245410 + BLACKJACK DNA AcHobo 2201 2264 -680 4 1187 987 201 4 112 chr17 79027241 79027447 -16245204 + B3 SINE B2 2 183 -33 4 1187 1086 87 65 65 chr17 79027447 79027458 -16245193 - B2_Mm2 SINE B2 -9 186 176 4 1187 222 37 0 0 chr17 79027458 79027485 -16245166 + (TA)n Simple_repeat Simple_repeat 2 28 0 4 1187 1086 87 65 65 chr17 79027485 79027658 -16244993 - B2_Mm2 SINE B2 -20 175 3 4 1187 987 201 4 112 chr17 79027658 79027692 -16244959 + B3 SINE B2 184 216 0 4 1187 261 207 53 181 chr17 79027692 79027789 -16244862 + BLACKJACK DNA AcHobo 2265 2349 -595 4 1187 2004 209 62 17 chr17 79027941 79028412 -16244239 + RLTR20B1 LTR ERVK 1 492 -71 4 1187 1290 69 77 31 chr17 79028412 79028607 -16244044 + Lx LINE L1 6321 6524 -130 4 1187 587 90 0 0 chr17 79028605 79028683 -16243968 - L1_Mur1 LINE L1 -1506 4380 4303 4 1187 299 225 14 0 chr17 79028683 79028754 -16243897 - B4A SINE B4 -219 73 2 4 1187 18679 147 9 21 chr17 79028836 79030724 -16241927 - L1_Mur2 LINE L1 -522 5355 3485 5 1187 206 32 32 0 chr17 79030724 79030755 -16241896 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 5 1187 18679 147 9 21 chr17 79030755 79032139 -16240512 - L1_Mur2 LINE L1 -2393 3484 2122 5 1187 1272 121 163 18 chr17 79032129 79032356 -16240295 + Lx3B LINE L1 6710 6969 -4 5 1187 999 242 50 47 chr17 79032388 79032709 -16239942 - MTEb LTR MaLR -57 322 1 5 1187 330 26 0 0 chr17 79032725 79032764 -16239887 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1187 252 315 76 22 chr17 79032824 79033009 -16239642 - L2 LINE L2 -2542 877 683 5 1187 1066 120 170 10 chr17 79034253 79034447 -16238204 - URR1A DNA MER1_type -1 225 1 5 1187 559 275 71 31 chr17 79034930 79035185 -16237466 - RLTR9A LTR ERVK 0 368 104 5 1187 327 297 52 59 chr17 79035493 79035629 -16237022 - L2b LINE L2 -5 3370 3236 5 1187 590 200 9 0 chr17 79036207 79036322 -16236329 - B1_Mur1 SINE Alu -10 139 24 5 148 386 302 19 0 chr17 79036381 79036487 -16236164 - PB1D10 SINE Alu -9 108 1 6 1188 4394 152 72 37 chr17 79036606 79037479 -16235172 - RMER13B LTR ERVK -4 904 1 6 1188 3271 139 178 5 chr17 79038926 79039504 -16233147 - RLTR33 LTR ERVK 0 678 1 6 1188 207 253 132 0 chr17 79039811 79039902 -16232749 - MIRc SINE MIR -163 105 3 6 1188 188 314 9 81 chr17 79041564 79041675 -16230976 - MIRc SINE MIR -113 155 53 6 1188 235 302 137 22 chr17 79042483 79042710 -16229941 - L1M5 LINE L1 -350 5823 5571 6 1188 682 247 82 10 chr17 79042906 79043102 -16229549 + B3 SINE B2 1 210 -6 6 1188 548 217 72 56 chr17 79043266 79043461 -16229190 - B3A SINE B2 0 198 1 6 1188 343 283 104 0 chr17 79044399 79044505 -16228146 + B3A SINE B2 1 117 -81 6 1188 33 0 0 0 chr17 79044552 79044585 -16228066 + AT_rich Low_complexity Low_complexity 1 33 0 6 1188 613 231 41 0 chr17 79044694 79044841 -16227810 + RSINE1 SINE B4 3 155 -10 7 1188 814 204 0 0 chr17 79044925 79045067 -16227584 + B1_Mur4 SINE Alu 2 143 -7 7 1188 243 0 0 0 chr17 79046016 79046043 -16226608 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 7 1188 227 103 26 0 chr17 79046047 79046086 -16226565 + (TCCC)n Simple_repeat Simple_repeat 4 43 0 7 1188 758 192 13 27 chr17 79046568 79046718 -16225933 + B1_Mur2 SINE Alu 1 148 -1 7 1188 1046 97 91 6 chr17 79047073 79047249 -16225402 - B2_Mm2 SINE B2 -4 191 1 7 1188 556 247 167 34 chr17 79047632 79047871 -16224780 - B4 SINE B4 -18 274 4 7 1188 458 260 102 7 chr17 79047901 79048048 -16224603 - B3A SINE B2 -36 162 2 7 1188 310 202 0 0 chr17 79048649 79048723 -16223928 - L1M2 LINE L1 -612 5691 5618 7 1188 192 40 0 0 chr17 79050335 79050360 -16222291 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 1188 315 65 0 0 chr17 79050360 79050406 -16222245 + (TC)n Simple_repeat Simple_repeat 1 46 0 8 1188 633 203 21 42 chr17 79050604 79050748 -16221903 - ID_B1 SINE B4 0 224 84 8 1188 231 61 0 0 chr17 79050880 79050913 -16221738 + (A)n Simple_repeat Simple_repeat 1 33 0 8 1188 531 0 0 0 chr17 79051522 79051581 -16221070 + (CA)n Simple_repeat Simple_repeat 2 60 0 8 1188 184 135 53 13 chr17 79052007 79052082 -16220569 + (TA)n Simple_repeat Simple_repeat 2 79 0 8 1188 577 161 15 36 chr17 79056623 79056745 -16215906 + B1F2 SINE Alu 1 147 -2 8 1188 11165 110 7 4 chr17 79057571 79059328 -16213323 + Lx8 LINE L1 4165 5927 -1546 8 1188 261 0 0 0 chr17 79059614 79059643 -16213008 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 8 1188 1241 77 54 16 chr17 79059946 79060103 -16212548 + B2_Mm2 SINE B2 3 164 -31 8 1188 252 0 0 0 chr17 79060103 79060131 -16212520 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 8 1188 1241 77 54 16 chr17 79060131 79060158 -16212493 + B2_Mm2 SINE B2 165 194 -1 8 1188 348 325 26 0 chr17 79060325 79060442 -16212209 - B1F SINE Alu -28 121 2 9 1188 1011 161 0 0 chr17 79060883 79061101 -16211550 + (CA)n Simple_repeat Simple_repeat 1 218 0 9 1188 289 291 79 34 chr17 79061402 79061491 -16211160 + MER58C DNA MER1_type 2 94 -121 9 1188 661 269 20 15 chr17 79061938 79062134 -16210517 - B3A SINE B2 -1 197 1 9 1188 213 65 0 0 chr17 79062357 79062388 -16210263 + (CAAAG)n Simple_repeat Simple_repeat 2 32 0 9 1188 21 36 0 0 chr17 79063909 79063937 -16208714 + AT_rich Low_complexity Low_complexity 1 28 0 9 1188 1435 188 154 3 chr17 79064713 79065076 -16207575 + MTD LTR MaLR 1 418 -1 9 1188 238 313 71 24 chr17 79065166 79065251 -16207400 + PB1D7 SINE Alu 2 90 -30 9 1188 390 221 80 56 chr17 79065490 79065827 -16206824 - Lx7 LINE L1 0 7696 7296 9 1188 418 248 19 2 chr17 79066709 79066813 -16205838 - B1F SINE Alu -37 112 6 9 1188 401 234 93 0 chr17 79067460 79067567 -16205084 + B1_Mur1 SINE Alu 10 126 -23 1 1188 689 203 22 7 chr17 79068681 79068820 -16203831 - B1_Mur1 SINE Alu -3 146 6 1 1188 25 31 0 0 chr17 79069422 79069454 -16203197 + AT_rich Low_complexity Low_complexity 1 32 0 1 1188 581 282 89 17 chr17 79071028 79071208 -16201443 - ID_B1 SINE B4 -31 193 1 1 1188 2096 237 17 8 chr17 79072382 79072863 -16199788 + Lx6 LINE L1 6799 7283 -177 1 1188 694 261 35 7 chr17 79073311 79073454 -16199197 - RSINE1 SINE B4 -15 150 4 1 1188 633 194 93 0 chr17 79073680 79073730 -16198921 - B1_Mur2 SINE Alu -7 142 93 1 1188 543 69 0 0 chr17 79073730 79073802 -16198849 + (TAGA)n Simple_repeat Simple_repeat 4 75 0 1 1188 633 194 93 0 chr17 79073802 79073880 -16198771 - B1_Mur2 SINE Alu -57 92 3 1 1188 829 222 18 41 chr17 79073924 79074145 -16198506 + B3 SINE B2 1 216 0 1 1188 1180 61 0 0 chr17 79075540 79075687 -16196964 + B1_Mus1 SINE Alu 2 148 0 1 1188 279 237 158 0 chr17 79077271 79077347 -16195304 - PB1D9 SINE Alu -20 100 13 1 1188 1454 69 16 0 chr17 79077623 79077811 -16194840 + B2_Mm2 SINE B2 1 191 -4 1 1188 876 201 24 0 chr17 79078042 79078211 -16194440 + B3 SINE B2 2 174 -42 1 1188 310 268 152 79 chr17 79078730 79079289 -16193362 + Lx9 LINE L1 7005 7604 -40 1 1188 927 185 101 10 chr17 79079645 79079852 -16192799 - URR1A DNA MER1_type 0 226 1 1 1188 756 229 0 20 chr17 79080010 79080157 -16192494 - B1_Mur4 SINE Alu -5 145 2 1 1188 293 315 64 64 chr17 79081088 79081261 -16191390 - MIRc SINE MIR -27 241 69 1 1188 333 188 0 0 chr17 79081261 79081346 -16191305 + GA-rich Low_complexity Low_complexity 2 86 0 1 1188 556 195 20 24 chr17 79081346 79081467 -16191184 + B1_Mur2 SINE Alu 40 147 0 1 1188 249 258 48 0 chr17 79081624 79081686 -16190965 + polypurine Low_complexity Low_complexity 5 69 0 1 1188 21 57 0 0 chr17 79083123 79083158 -16189493 + AT_rich Low_complexity Low_complexity 1 35 0 1 1188 28 48 0 0 chr17 79083430 79083472 -16189179 + AT_rich Low_complexity Low_complexity 1 42 0 1 1188 22 35 0 0 chr17 79083785 79083814 -16188837 + AT_rich Low_complexity Low_complexity 1 29 0 1 1188 355 243 141 51 chr17 79084664 79084820 -16187831 - Charlie7 DNA MER1_type -389 2223 2054 1 1188 218 268 34 51 chr17 79084812 79084871 -16187780 - B3 SINE B2 -157 59 2 1 1188 1257 75 35 6 chr17 79084939 79085112 -16187539 + B2_Mm1t SINE B2 2 179 -14 1 1188 354 87 350 10 chr17 79085140 79085243 -16187408 + B2_Mm2 SINE B2 47 184 -11 1 1188 1180 175 12 10 chr17 79085384 79085603 -16187048 - B3 SINE B2 -1 215 3 1 1188 246 337 11 11 chr17 79085628 79085715 -16186936 + PB1D10 SINE Alu 10 96 -21 1 1188 1229 148 41 5 chr17 79085935 79086153 -16186498 + URR1A DNA MER1_type 1 226 0 1 1188 1251 41 0 0 chr17 79086247 79086394 -16186257 + B1_Mus2 SINE Alu 1 147 0 1 1188 594 291 48 0 chr17 79087422 79087499 -16185152 + ID SINE ID 4 88 -136 1 1188 368 291 45 9 chr17 79087499 79087610 -16185041 + PB1D10 SINE Alu 3 117 0 1 1188 25 0 0 0 chr17 79087713 79087738 -16184913 + AT_rich Low_complexity Low_complexity 1 25 0 1 1188 6730 85 14 0 chr17 79088262 79089225 -16183426 + L1_Mus3 LINE L1 5662 6638 0 1 1188 294 29 0 0 chr17 79089338 79089373 -16183278 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1188 313 294 124 42 chr17 79089377 79089590 -16183061 + L1_Rod LINE L1 1465 1704 -4143 1 1188 2392 118 31 10 chr17 79089590 79089976 -16182675 + ORR1B1 LTR MaLR 1 394 0 1 1188 313 294 124 42 chr17 79089976 79090068 -16182583 + L1_Rod LINE L1 1705 1794 -4053 1 1188 475 226 144 37 chr17 79090196 79090384 -16182267 + L1_Rod LINE L1 2081 2288 -3559 1 1188 728 291 84 0 chr17 79090386 79090706 -16181945 + L1_Mur3 LINE L1 2472 2818 -3062 1 1188 465 242 16 40 chr17 79090753 79090878 -16181773 + B1_Mur1 SINE Alu 24 145 -4 1 1188 370 247 38 13 chr17 79090905 79091064 -16181587 + L1_Rod LINE L1 2870 3016 -2867 1 1188 644 247 18 53 chr17 79091070 79091241 -16181410 + B3A SINE B2 1 165 -33 1 1188 328 287 127 3 chr17 79091263 79091546 -16181105 + L1_Mur3 LINE L1 2996 3313 -2567 1 1188 3284 41 5 2 chr17 79092142 79092537 -16180114 + MTA_Mm LTR MaLR 1 396 0 1 1188 23 0 0 0 chr17 79093322 79093345 -16179306 + AT_rich Low_complexity Low_complexity 1 23 0 1 1188 733 234 0 0 chr17 79093940 79094068 -16178583 + B3 SINE B2 1 128 -88 1 1188 782 276 43 54 chr17 79094217 79094269 -16178382 - B4A SINE B4 -15 277 232 1 1188 378 0 0 0 chr17 79094269 79094311 -16178340 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 1 1188 782 276 43 54 chr17 79094311 79094537 -16178114 - B4A SINE B4 -61 231 2 1 1188 197 298 159 28 chr17 79095040 79095147 -16177504 - L2 LINE L2 -604 2815 2695 1 1188 962 208 83 0 chr17 79095890 79096082 -16176569 + B3 SINE B2 1 208 -8 1 1188 255 319 10 99 chr17 79096132 79096233 -16176418 + PB1D10 SINE Alu 1 92 -25 1 1188 705 124 43 7 chr17 79096513 79096651 -16176000 + B2_Mm1t SINE B2 51 193 0 1 1188 1175 50 0 0 chr17 79096651 79096790 -16175861 + B1_Mus1 SINE Alu 1 139 -9 1 1188 672 150 26 0 chr17 79097366 79097479 -16175172 + B2_Mm2 SINE B2 77 192 -3 1 1188 209 127 54 18 chr17 79097520 79097576 -16175075 + (ATATG)n Simple_repeat Simple_repeat 2 59 0 1 1188 1546 212 69 71 chr17 79098361 79098565 -16174086 + MTD LTR MaLR 1 208 -211 1 1188 998 228 19 0 chr17 79098565 79098776 -16173875 + B3 SINE B2 1 215 -1 1 1188 1546 212 69 71 chr17 79098776 79098977 -16173674 + MTD LTR MaLR 209 405 -14 1 1188 207 88 0 0 chr17 79099228 79099262 -16173389 + (TTTTA)n Simple_repeat Simple_repeat 5 38 0 1 1188 213 132 0 0 chr17 79099556 79099594 -16173057 + (CAAAAA)n Simple_repeat Simple_repeat 2 39 0 1 1188 354 266 14 65 chr17 79099681 79099819 -16172832 + ID4_ SINE ID 5 135 -17 1 1188 419 271 107 55 chr17 79100664 79100992 -16171659 + Lx8 LINE L1 7120 7464 -9 1 1188 292 163 109 89 chr17 79101422 79101523 -16171128 + RLTR25B LTR ERVK 407 509 -519 1 1188 769 59 0 0 chr17 79101464 79101566 -16171085 + B1_Mus2 SINE Alu 46 147 0 1 1188 2548 172 41 12 chr17 79102404 79102986 -16169665 + RMER6-int LTR ERVK 2652 3177 0 1 1188 3201 145 77 31 chr17 79102986 79103639 -16169012 + RMER6C LTR ERVK 1 683 -7 1 1188 903 248 19 5 chr17 79104667 79104874 -16167777 - B3 SINE B2 -5 211 2 1 1188 1200 99 71 0 chr17 79105488 79105670 -16166981 + B2_Mm2 SINE B2 1 195 0 1 1188 1609 138 47 106 chr17 79105689 79106030 -16166621 - ORR1A4 LTR MaLR -8 321 1 1 1188 266 303 40 20 chr17 79106037 79106138 -16166513 + PB1D10 SINE Alu 1 103 -14 1 1188 277 24 48 0 chr17 79106466 79106508 -16166143 + (CAAAAA)n Simple_repeat Simple_repeat 1 44 0 1 1188 33 56 0 0 chr17 79106734 79106788 -16165863 + AT_rich Low_complexity Low_complexity 1 54 0 1 1188 1457 279 14 92 chr17 79107494 79108083 -16164568 + RLTR31_Mur LTR ERVK 11 553 0 1 1188 1688 187 83 55 chr17 79108196 79108901 -16163750 + RMER3D-int LTR ERVK 132 1386 -1456 1 1188 1679 229 92 85 chr17 79108901 79109997 -16162654 + RMER3D-int LTR ERVK 277 2319 -523 1 1188 214 236 73 0 chr17 79110310 79110365 -16162286 - ID4 SINE ID -2 81 23 1 1188 1203 55 0 0 chr17 79110726 79110872 -16161779 - B1_Mus2 SINE Alu 0 147 2 1 1188 859 167 0 14 chr17 79110987 79111127 -16161524 + B1_Mus2 SINE Alu 4 141 -6 1 1188 1300 73 11 38 chr17 79111136 79111320 -16161331 + B2_Mm1t SINE B2 1 179 -14 1 1188 351 123 310 26 chr17 79111333 79111449 -16161202 + B2_Mm2 SINE B2 47 195 0 1 1188 579 237 22 29 chr17 79112197 79112336 -16160315 + B1F SINE Alu 7 144 -5 1 1188 1185 158 9 9 chr17 79112854 79113065 -16159586 + L1_Mur1 LINE L1 5316 5526 -360 1 1188 303 215 7 94 chr17 79113223 79113372 -16159279 + C-rich Low_complexity Low_complexity 6 141 0 1 1188 1060 43 34 41 chr17 79113708 79113854 -16158797 + B1_Mus2 SINE Alu 2 146 -1 1 1188 418 282 49 7 chr17 79113993 79114136 -16158515 + B1F SINE Alu 1 149 0 1 1188 502 250 103 17 chr17 79114529 79114704 -16157947 + B3A SINE B2 8 197 -1 1 1188 312 229 67 0 chr17 79115007 79115112 -16157539 - B1_Mus1 SINE Alu -23 125 14 1 1188 3200 56 0 17 chr17 79115401 79115804 -16156847 + MTA_Mm LTR MaLR 1 396 0 1 1188 561 274 122 52 chr17 79116120 79116209 -16156442 - Ricksha DNA MuDR -3 3243 3163 1 1188 369 0 0 0 chr17 79116209 79116250 -16156401 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1188 956 143 0 0 chr17 79116251 79116398 -16156253 - B1_Mur1 SINE Alu 0 149 3 1 1188 561 274 122 52 chr17 79116398 79116706 -16155945 - Ricksha DNA MuDR -84 3162 2816 1 1188 342 0 0 0 chr17 79117002 79117040 -16155611 + (A)n Simple_repeat Simple_repeat 1 38 0 1 1188 418 255 194 49 chr17 79117197 79117543 -16155108 + L1_Mur3 LINE L1 5121 5543 -337 1 1188 416 198 116 9 chr17 79117729 79117841 -16154810 - RSINE1 SINE B4 -28 137 14 1 1188 929 261 41 22 chr17 79118190 79118457 -16154194 - B4A SINE B4 -19 273 2 1 1188 502 254 203 6 chr17 79119077 79119259 -16153392 - MTD LTR MaLR -201 218 1 1 1188 36 91 0 0 chr17 79119686 79119785 -16152866 + AT_rich Low_complexity Low_complexity 1 99 0 1 1188 505 243 0 0 chr17 79120701 79120808 -16151843 - B1_Mur1 SINE Alu -3 146 40 1 1188 444 198 42 48 chr17 79120960 79121125 -16151526 - RLTR43A LTR ERVK 0 364 201 1 1188 2302 133 33 0 chr17 79121761 79122123 -16150528 + Lx LINE L1 6277 6650 -4 1 1188 375 23 0 0 chr17 79122587 79122631 -16150020 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 1 1188 21 0 0 0 chr17 79123529 79123550 -16149101 + AT_rich Low_complexity Low_complexity 1 21 0 1 1188 889 162 21 0 chr17 79124423 79124565 -16148086 + B1_Mus1 SINE Alu 2 146 -2 1 1188 214 182 0 0 chr17 79124566 79124610 -16148041 + A-rich Low_complexity Low_complexity 1 44 0 2 1188 228 374 105 45 chr17 79124772 79124932 -16147719 + Tigger13a DNA MER2_type 30 194 -577 2 1188 766 186 21 0 chr17 79124932 79125077 -16147574 + B1_Mur3 SINE Alu 2 149 0 2 1188 228 374 105 45 chr17 79125077 79125431 -16147220 + Tigger13a DNA MER2_type 195 575 -196 2 1188 683 197 179 5 chr17 79125445 79125629 -16147022 - B3 SINE B2 0 216 1 2 1188 359 284 98 45 chr17 79127172 79127305 -16145346 + ID_B1 SINE B4 65 204 -20 2 1188 269 213 33 0 chr17 79130081 79130142 -16142509 + ID4_ SINE ID 3 65 -18 2 1188 242 288 188 9 chr17 79130645 79130757 -16141894 - MER5B DNA MER1_type -46 132 1 2 1188 326 319 9 9 chr17 79131784 79131898 -16140753 - B1F1 SINE Alu -26 123 10 2 1188 260 314 0 0 chr17 79132223 79132293 -16140358 + MIRm SINE MIR 203 272 -4 2 1188 396 0 0 0 chr17 79132410 79132454 -16140197 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1188 1220 54 0 0 chr17 79133588 79133735 -16138916 - B1_Mus2 SINE Alu 0 147 1 2 1188 184 250 0 0 chr17 79134354 79134402 -16138249 - MIR SINE MIR -80 128 81 2 1188 205 233 27 27 chr17 79135487 79135562 -16137089 + G-rich Low_complexity Low_complexity 2 76 0 2 1188 25 0 0 0 chr17 79135950 79135975 -16136676 + GC_rich Low_complexity Low_complexity 1 25 0 2 1188 309 298 26 78 chr17 79137544 79137563 -16135088 + MT2B LTR ERVL 145 204 -397 2 1188 488 160 91 36 chr17 79137563 79137673 -16134978 + B1_Mus2 SINE Alu 1 116 -31 2 1188 309 298 26 78 chr17 79137673 79137697 -16134954 + MT2B LTR ERVL 205 289 -312 2 1188 23 0 0 0 chr17 79137697 79137720 -16134931 + AT_rich Low_complexity Low_complexity 1 23 0 2 1188 244 254 0 0 chr17 79137769 79137824 -16134827 + T-rich Low_complexity Low_complexity 1 55 0 2 1188 954 87 28 21 chr17 79137827 79137968 -16134683 - B1_Mur3 SINE Alu -7 142 1 2 1188 643 277 25 119 chr17 79138129 79138449 -16134202 + B4A SINE B4 3 292 0 2 1188 324 244 0 73 chr17 79138467 79138591 -16134060 + (CA)n Simple_repeat Simple_repeat 1 115 0 2 1188 387 0 0 0 chr17 79138930 79138973 -16133678 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1188 322 230 11 22 chr17 79138978 79139067 -16133584 - RSINE1 SINE B4 -29 136 49 2 1188 432 0 0 0 chr17 79139218 79139266 -16133385 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1188 479 194 0 173 chr17 79140184 79140231 -16132420 + B3A SINE B2 1 24 -174 2 1188 785 89 24 0 chr17 79140231 79140355 -16132296 - L1_Mus2 LINE L1 0 6566 6440 2 1188 479 194 0 173 chr17 79140355 79140463 -16132188 + B3A SINE B2 25 129 -69 2 1188 835 161 22 0 chr17 79140665 79140802 -16131849 - B1_Mur4 SINE Alu -9 141 2 2 1188 23 68 0 0 chr17 79140839 79140883 -16131768 + AT_rich Low_complexity Low_complexity 1 44 0 2 1188 999 186 114 0 chr17 79141075 79141268 -16131383 - B3 SINE B2 0 216 2 2 1188 3346 42 0 2 chr17 79141268 79141695 -16130956 - MT2C_Mm LTR ERVL 0 475 50 2 1188 585 0 0 0 chr17 79141695 79141760 -16130891 + (TG)n Simple_repeat Simple_repeat 1 65 0 2 1188 197 214 0 35 chr17 79142049 79142107 -16130544 + GA-rich Low_complexity Low_complexity 4 59 0 2 1188 273 280 25 93 chr17 79142719 79142755 -16129896 - PB1D9 SINE Alu 0 120 11 2 1188 213 299 19 155 chr17 79142755 79142837 -16129814 - B4A SINE B4 -122 170 96 2 1188 1166 83 77 11 chr17 79142837 79143019 -16129632 + B2_Mm2 SINE B2 1 194 -1 2 1188 213 299 19 155 chr17 79143019 79143039 -16129612 - B4A SINE B4 -197 95 82 2 1188 889 79 0 8 chr17 79143078 79143206 -16129445 + B1_Mus2 SINE Alu 20 146 -1 2 1188 299 295 104 90 chr17 79143465 79143666 -16128985 + B4A SINE B4 1 204 -88 2 1188 855 137 39 103 chr17 79144099 79144302 -16128349 - B2_Mm2 SINE B2 -5 190 1 2 1188 449 178 10 0 chr17 79144438 79144457 -16128194 + (TA)n Simple_repeat Simple_repeat 1 20 0 2 1188 3272 136 204 16 chr17 79144457 79145093 -16127558 + RMER6A LTR ERVK 1 756 0 2 1188 449 178 10 0 chr17 79145093 79145174 -16127477 + (TA)n Simple_repeat Simple_repeat 2 82 0 2 1188 930 222 328 36 chr17 79145448 79145887 -16126764 - RMER2 LTR ERV1 0 567 1 2 1188 552 220 83 0 chr17 79146123 79146255 -16126396 - B4A SINE B4 -148 144 2 2 1188 556 138 0 0 chr17 79146440 79146527 -16126124 - B1_Mus1 SINE Alu -59 89 3 2 1188 345 267 65 0 chr17 79146789 79146897 -16125754 + L1MB8 LINE L1 5557 5672 -492 2 1188 420 250 30 0 chr17 79146899 79146999 -16125652 + PB1D7 SINE Alu 12 114 -6 2 1188 544 259 154 62 chr17 79146999 79147304 -16125347 + L1MB8 LINE L1 5668 6000 -178 2 1188 311 266 12 25 chr17 79147399 79147480 -16125171 - ID4_ SINE ID -2 81 2 2 1188 21 0 0 0 chr17 79147544 79147565 -16125086 + AT_rich Low_complexity Low_complexity 1 21 0 2 1188 429 70 0 0 chr17 79147613 79147670 -16124981 + (GA)n Simple_repeat Simple_repeat 1 57 0 2 1188 582 60 0 0 chr17 79147670 79147753 -16124898 + (GGAA)n Simple_repeat Simple_repeat 4 86 0 2 1188 201 254 14 69 chr17 79148059 79148131 -16124520 + L2a LINE L2 3354 3421 -5 2 1188 1107 120 11 0 chr17 79148595 79148770 -16123881 + B2_Mm2 SINE B2 1 177 -18 2 1188 7940 73 10 2 chr17 79148947 79149971 -16122680 - L1_Mus4 LINE L1 0 6636 5605 2 1188 516 159 0 0 chr17 79150202 79150340 -16122311 + GA-rich Low_complexity Low_complexity 22 159 0 2 1188 757 124 276 6 chr17 79152735 79152905 -16119746 - B3 SINE B2 0 216 1 2 1188 21 36 0 0 chr17 79154256 79154284 -16118367 + AT_rich Low_complexity Low_complexity 1 28 0 2 1188 516 242 145 0 chr17 79155211 79155335 -16117316 - B1_Mur1 SINE Alu -6 143 2 2 1188 716 154 0 56 chr17 79155659 79155803 -16116848 + B1_Mus2 SINE Alu 12 147 0 2 1188 450 264 16 0 chr17 79156596 79156721 -16115930 + B1F SINE Alu 23 149 0 2 1188 879 200 200 0 chr17 79156733 79156913 -16115738 + B3 SINE B2 1 216 0 2 1188 748 215 0 27 chr17 79156976 79157124 -16115527 - B1_Mm SINE Alu -2 145 2 2 1188 497 268 29 35 chr17 79157143 79157313 -16115338 + L1MC4 LINE L1 7395 7563 -479 2 1188 505 162 24 98 chr17 79157328 79157451 -16115200 + B1_Mus1 SINE Alu 15 128 -20 2 1188 423 272 86 16 chr17 79157539 79157726 -16114925 + L1MC4 LINE L1 7694 7893 -149 2 1188 284 273 0 61 chr17 79158293 79158375 -16114276 + L1M5 LINE L1 5536 5612 -561 2 1188 611 225 42 7 chr17 79158750 79158893 -16113758 - B1F2 SINE Alu -1 148 1 2 1188 247 324 146 10 chr17 79158922 79159025 -16113626 + PB1D10 SINE Alu 1 117 0 2 1188 314 145 32 0 chr17 79159044 79159106 -16113545 + GA-rich Low_complexity Low_complexity 2 65 0 2 1188 1126 98 0 12 chr17 79159395 79159561 -16113090 - B2_Mm2 SINE B2 -31 164 1 2 1188 893 57 0 16 chr17 79159581 79159699 -16112952 + B1_Mus1 SINE Alu 20 136 -12 2 1188 333 0 0 0 chr17 79159699 79159736 -16112915 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2 1188 1011 112 0 0 chr17 79160061 79160240 -16112411 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 1188 24 0 0 0 chr17 79161649 79161673 -16110978 + AT_rich Low_complexity Low_complexity 1 24 0 2 1188 219 327 62 18 chr17 79161909 79162021 -16110630 - PB1D10 SINE Alu 0 117 1 2 1188 263 267 26 13 chr17 79161948 79162024 -16110627 - ID_B1 SINE B4 -69 155 79 2 1188 991 192 112 0 chr17 79162038 79162225 -16110426 + B3 SINE B2 2 209 -7 2 1188 22 35 0 0 chr17 79162610 79162639 -16110012 + AT_rich Low_complexity Low_complexity 1 29 0 2 1188 254 125 21 0 chr17 79163027 79163075 -16109576 + (GA)n Simple_repeat Simple_repeat 1 49 0 2 1188 1496 44 16 16 chr17 79163109 79163295 -16109356 - B2_Mm2 SINE B2 -9 186 1 2 1188 234 203 51 0 chr17 79164006 79164065 -16108586 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 2 1188 1377 99 21 0 chr17 79164824 79165015 -16107636 - B2_Mm2 SINE B2 0 195 1 2 1188 940 162 14 0 chr17 79165247 79165395 -16107256 + B1_Mur4 SINE Alu 1 150 0 2 1188 464 233 109 63 chr17 79165496 79165670 -16106981 - B3A SINE B2 -9 189 8 2 1188 21 0 0 0 chr17 79165894 79165915 -16106736 + AT_rich Low_complexity Low_complexity 1 21 0 2 1188 2470 63 46 11 chr17 79166515 79166885 -16105766 - MTB LTR MaLR 0 400 18 2 1189 1144 122 0 0 chr17 79168086 79168234 -16104417 - B1_Mur4 SINE Alu -1 149 2 2 1189 776 200 21 21 chr17 79169037 79169180 -16103471 - B1_Mur1 SINE Alu -2 147 5 2 1189 211 268 229 12 chr17 79169448 79169531 -16103120 + PB1D10 SINE Alu 14 114 -3 2 1189 751 248 35 0 chr17 79169937 79170078 -16102573 + B1F1 SINE Alu 1 146 -3 2 1189 182 343 20 20 chr17 79170776 79170877 -16101774 + L2b LINE L2 3087 3187 -188 2 1189 1626 73 0 0 chr17 79171536 79171727 -16100924 - B2_Mm1a SINE B2 -2 191 1 2 1189 28 71 0 0 chr17 79172149 79172205 -16100446 + AT_rich Low_complexity Low_complexity 1 56 0 2 1189 359 177 190 0 chr17 79172512 79172591 -16100060 + B3 SINE B2 49 142 -74 2 1189 256 338 66 22 chr17 79172631 79172767 -16099884 - ID_B1 SINE B4 0 224 83 2 1189 338 292 177 0 chr17 79173203 79173299 -16099352 - PB1D10 SINE Alu -2 115 3 2 1189 4304 42 17 0 chr17 79173300 79173841 -16098810 - L1Md_F2 LINE L1 0 6582 6041 2 1189 634 228 73 37 chr17 79175482 79175673 -16096978 + URR1A DNA MER1_type 28 225 -1 2 1189 746 256 54 11 chr17 79175679 79175865 -16096786 + B3A SINE B2 1 194 -4 2 1189 333 0 0 0 chr17 79175865 79175902 -16096749 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 2 1189 1230 51 0 0 chr17 79175902 79176040 -16096611 - B1_Mus1 SINE Alu -10 138 1 2 1189 1728 21 21 0 chr17 79176048 79176236 -16096415 - B2_Mm1a SINE B2 -1 192 1 2 1189 22057 134 106 6 chr17 79176318 79181943 -16090708 + Lx LINE L1 422 6654 0 3 1189 1284 41 14 0 chr17 79182936 79183081 -16089570 - B1_Mus1 SINE Alu 0 148 2 3 1189 240 35 0 0 chr17 79183667 79183696 -16088955 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 3 1189 23010 19 1 0 chr17 79183831 79186458 -16086193 + L1Md_A LINE L1 2958 5586 -297 3 1189 8974 33 1 0 chr17 79186458 79187452 -16085199 + L1Md_A LINE L1 5587 6581 -1 3 1189 1309 243 19 22 chr17 79187452 79187502 -16085149 + L1MD LINE L1 5616 5664 -578 3 1189 1162 92 6 0 chr17 79187703 79187866 -16084785 + B2_Mm1t SINE B2 3 166 -27 3 1189 448 272 63 8 chr17 79188275 79188401 -16084250 + RSINE1 SINE B4 23 155 -10 3 1189 4399 65 43 12 chr17 79188648 79189208 -16083443 + Lx3_Mus LINE L1 6431 7007 -2 3 1189 915 136 12 37 chr17 79189213 79189374 -16083277 + B2_Mm2 SINE B2 10 166 -29 3 1189 730 65 18 9 chr17 79189673 79189782 -16082869 + (TTTCC)n Simple_repeat Simple_repeat 5 114 0 3 1189 861 176 21 0 chr17 79189819 79189961 -16082690 - B1_Mur4 SINE Alu -5 145 1 3 1189 1347 72 0 0 chr17 79190038 79190218 -16082433 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 1189 185 286 68 41 chr17 79190536 79190609 -16082042 + MIR3 SINE MIR 9 83 -125 3 1189 479 289 55 110 chr17 79191193 79191411 -16081240 - MER58A DNA MER1_type 0 224 19 3 1189 266 296 58 53 chr17 79191552 79191723 -16080928 + L1MEc LINE L1 682 853 -5547 3 1189 691 259 34 0 chr17 79192900 79193047 -16079604 - B3A SINE B2 -45 153 2 3 1189 681 202 114 18 chr17 79196004 79196170 -16076481 + B3A SINE B2 1 182 -16 3 1189 236 284 92 64 chr17 79196358 79196467 -16076184 - Charlie24 DNA MER1_type -1691 759 648 3 1189 756 235 0 32 chr17 79196489 79196643 -16076008 - B1_Mur1 SINE Alu 0 149 1 3 1189 539 316 90 64 chr17 79197383 79197650 -16075001 + B4A SINE B4 1 274 -18 3 1189 1331 189 14 0 chr17 79198825 79199037 -16073614 - B3 SINE B2 -1 215 1 3 1189 357 133 0 0 chr17 79199450 79199525 -16073126 + (T)n Simple_repeat Simple_repeat 1 75 0 3 1189 1116 62 13 52 chr17 79199525 79199679 -16072972 - B1_Mus1 SINE Alu 0 148 1 3 1189 235 302 108 16 chr17 79199778 79199963 -16072688 + L2c LINE L2 2512 2713 -706 3 1189 420 232 42 0 chr17 79200363 79200458 -16072193 - BC1_Mm scRNA scRNA -51 101 3 3 1189 247 267 99 93 chr17 79200461 79200643 -16072008 + L2c LINE L2 3200 3382 -5 3 1189 421 252 157 0 chr17 79202065 79202180 -16070471 + B1_Mur1 SINE Alu 1 133 -16 3 1189 2276 113 0 0 chr17 79202206 79202525 -16070126 - ORR1A2 LTR MaLR -8 319 1 3 1189 240 284 40 0 chr17 79203000 79203074 -16069577 - PB1D10 SINE Alu -8 109 33 3 1189 2689 323 70 53 chr17 79203332 79204846 -16067805 + Lx8 LINE L1 5791 7330 -143 3 1189 216 0 0 0 chr17 79204847 79204871 -16067780 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1189 457 264 0 36 chr17 79205145 79205255 -16067396 + PB1D10 SINE Alu 4 109 -8 3 1189 393 289 0 0 chr17 79205599 79205682 -16066969 + ID4_ SINE ID 1 83 0 3 1189 356 299 12 0 chr17 79205742 79205826 -16066825 - ID4_ SINE ID -61 91 8 3 1189 1356 115 11 0 chr17 79205909 79206091 -16066560 + B2_Mm1t SINE B2 2 185 -8 3 1189 585 278 107 23 chr17 79206093 79206270 -16066381 - B3A SINE B2 -6 192 1 3 1189 47 61 0 0 chr17 79206274 79206356 -16066295 + AT_rich Low_complexity Low_complexity 1 82 0 3 1189 450 232 39 29 chr17 79206357 79206459 -16066192 - B1F SINE Alu -46 103 1 3 1189 23 0 0 0 chr17 79206612 79206635 -16066016 + AT_rich Low_complexity Low_complexity 1 23 0 3 1189 428 318 39 7 chr17 79206819 79206974 -16065677 + MTEb LTR MaLR 202 361 -18 3 1189 216 139 0 0 chr17 79208264 79208300 -16064351 + PB1 SINE Alu 24 59 -68 3 1189 24 0 0 0 chr17 79208384 79208408 -16064243 + AT_rich Low_complexity Low_complexity 1 24 0 3 1189 200 194 134 0 chr17 79208874 79208941 -16063710 - MIR SINE MIR -65 143 68 3 1189 1148 88 112 0 chr17 79209361 79209521 -16063130 + B2_Mm1t SINE B2 2 179 -14 3 1189 370 140 9 0 chr17 79209572 79209636 -16063015 + B2_Mm2 SINE B2 47 114 -102 3 1189 405 0 0 0 chr17 79209641 79209686 -16062965 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1189 210 128 0 0 chr17 79209998 79210037 -16062614 + (TTG)n Simple_repeat Simple_repeat 2 40 0 3 1189 1133 103 7 0 chr17 79210053 79210199 -16062452 - B1_Mus2 SINE Alu 0 147 1 3 1189 444 273 103 48 chr17 79211065 79211211 -16061440 - RSINE1 SINE B4 -9 156 3 3 1189 227 284 26 39 chr17 79211230 79211307 -16061344 - B1F SINE Alu 0 149 74 3 1189 558 241 64 0 chr17 79211369 79211510 -16061141 + B3 SINE B2 62 211 -5 3 1189 522 31 0 0 chr17 79212939 79213003 -16059648 + (TC)n Simple_repeat Simple_repeat 2 65 0 3 1189 226 289 0 0 chr17 79213003 79213055 -16059596 - PB1D9 SINE Alu -68 52 1 3 1189 27 0 0 0 chr17 79213068 79213095 -16059556 + AT_rich Low_complexity Low_complexity 1 27 0 3 1189 423 252 40 0 chr17 79213748 79213847 -16058804 - PB1 SINE Alu -12 115 13 3 1189 271 262 0 16 chr17 79213920 79213982 -16058669 - ID4 SINE ID -22 61 1 3 1189 386 305 37 9 chr17 79214001 79214122 -16058529 - B1F1 SINE Alu -24 125 2 3 1189 660 277 19 6 chr17 79215336 79215492 -16057159 + B4A SINE B4 127 284 -8 3 1189 208 93 0 65 chr17 79215820 79215839 -16056812 + polypurine Low_complexity Low_complexity 4 20 0 3 1189 1620 0 0 0 chr17 79215839 79216019 -16056632 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 3 1189 208 93 0 65 chr17 79216019 79216045 -16056606 + polypurine Low_complexity Low_complexity 21 46 0 3 1189 330 302 35 35 chr17 79217042 79217186 -16055465 + B1F1 SINE Alu 5 148 -1 3 1189 248 339 97 0 chr17 79218416 79218540 -16054111 + MIR SINE MIR 8 143 -119 3 1189 423 0 0 0 chr17 79219324 79219371 -16053280 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1189 336 291 48 19 chr17 79219556 79219661 -16052990 + PB1 SINE Alu 3 110 -17 3 1189 503 280 61 0 chr17 79220442 79220574 -16052077 + B1_Mus1 SINE Alu 1 140 -8 3 1189 21 0 0 0 chr17 79220588 79220609 -16052042 + AT_rich Low_complexity Low_complexity 1 21 0 3 1189 662 245 88 0 chr17 79221098 79221245 -16051406 - RSINE1 SINE B4 -5 160 1 3 1189 270 0 0 0 chr17 79221298 79221328 -16051323 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1189 341 270 5 75 chr17 79221416 79221525 -16051126 + ID4 SINE ID 9 111 -41 3 1189 1097 63 0 0 chr17 79222068 79222211 -16050440 - B1_Mus1 SINE Alu 0 148 6 3 1189 413 302 43 0 chr17 79222969 79223131 -16049520 + L1MA5 LINE L1 6126 6294 -6 3 1189 575 236 82 13 chr17 79223502 79223661 -16048990 + B3 SINE B2 1 170 -46 3 1189 232 250 0 0 chr17 79223729 79223777 -16048874 + GA-rich Low_complexity Low_complexity 4 51 0 3 1189 604 192 145 8 chr17 79224289 79224420 -16048231 - B1_Mur1 SINE Alu 0 149 1 3 1189 291 260 142 19 chr17 79224442 79224548 -16048103 + PB1D7 SINE Alu 1 119 -1 3 1189 304 243 13 13 chr17 79225080 79225155 -16047496 - PB1D10 SINE Alu 0 117 43 3 1189 257 319 0 53 chr17 79225295 79225371 -16047280 + tRNA-Ala-GCY_ tRNA tRNA 3 74 -1 3 1189 289 259 0 78 chr17 79225371 79225401 -16047250 + ID4_ SINE ID 9 102 -50 3 1189 631 201 26 164 chr17 79226045 79226271 -16046380 - B3A SINE B2 0 195 1 3 1189 26 0 0 0 chr17 79226494 79226520 -16046131 + AT_rich Low_complexity Low_complexity 1 26 0 3 1189 263 237 111 20 chr17 79226531 79226630 -16046021 + MIR SINE MIR 125 232 -30 3 1189 283 244 129 29 chr17 79227483 79227622 -16045029 + L1MEc LINE L1 36 188 -6212 3 1189 276 258 34 0 chr17 79227634 79227723 -16044928 + L1MEc LINE L1 4003 4094 -2225 3 1189 323 291 105 58 chr17 79227721 79227911 -16044740 + L1MD2 LINE L1 6152 6350 -9 3 1189 355 253 10 69 chr17 79227953 79228055 -16044596 + PB1D10 SINE Alu 16 111 -6 3 1189 482 220 27 9 chr17 79228130 79228240 -16044411 + ORR1D2 LTR MaLR 15 126 -244 3 1189 226 257 143 80 chr17 79228300 79228524 -16044127 + L1MC LINE L1 5493 5730 -614 3 1189 272 258 62 31 chr17 79229377 79229505 -16043146 + MLT1C LTR MaLR 3 134 -333 3 1189 385 260 42 0 chr17 79230055 79230151 -16042500 + RSINE1 SINE B4 58 157 -8 3 1189 236 295 0 0 chr17 79230260 79230321 -16042330 - MER58B DNA MER1_type -53 288 228 3 1189 386 234 101 8 chr17 79231375 79231504 -16041147 - L2a LINE L2 -3 3423 3283 3 1189 238 319 89 8 chr17 79231538 79231699 -16040952 - L2a LINE L2 -285 3090 2923 3 1189 384 119 0 0 chr17 79231808 79231867 -16040784 + (TA)n Simple_repeat Simple_repeat 2 60 0 3 1189 193 303 236 0 chr17 79231872 79231961 -16040690 - L2a LINE L2 -674 2745 2636 3 1189 217 128 43 0 chr17 79232114 79232161 -16040490 + GA-rich Low_complexity Low_complexity 1 49 0 3 1189 225 324 0 14 chr17 79232162 79232231 -16040420 - ID_B1 SINE B4 -12 212 145 3 1189 359 257 32 81 chr17 79232540 79232663 -16039988 + B1F1 SINE Alu 13 129 -20 3 1189 470 296 26 74 chr17 79232708 79232898 -16039753 + HAL1 LINE L1 418 598 -1909 3 1189 746 231 139 5 chr17 79233635 79233679 -16038972 - B3 SINE B2 -3 213 170 3 1189 480 77 0 0 chr17 79233679 79233744 -16038907 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 1189 746 231 139 5 chr17 79233744 79233886 -16038765 - B3 SINE B2 -47 169 3 3 1189 969 9 0 0 chr17 79234008 79234118 -16038533 + (GAAA)n Simple_repeat Simple_repeat 2 111 0 3 1189 182 270 107 81 chr17 79235240 79235389 -16037262 + L2 LINE L2 2567 2719 -700 3 1189 219 204 0 0 chr17 79235489 79235538 -16037113 + CT-rich Low_complexity Low_complexity 3 51 0 3 1189 840 131 107 11 chr17 79235540 79235717 -16036934 - B2_Mm2 SINE B2 -1 194 1 4 1189 297 246 0 0 chr17 79236040 79236101 -16036550 + tRNA-Ala-GCA tRNA tRNA 2 62 -13 4 1189 238 343 12 0 chr17 79236149 79236250 -16036401 + MIRb SINE MIR 79 180 -88 4 1189 323 213 27 0 chr17 79236349 79236424 -16036227 - MLT1F LTR MaLR -271 277 201 4 1189 709 155 0 17 chr17 79236498 79236616 -16036035 + B1_Mur4 SINE Alu 35 150 0 4 1189 296 186 51 0 chr17 79236735 79236794 -16035857 + B1F SINE Alu 54 115 -34 4 1189 282 244 0 100 chr17 79236794 79236835 -16035816 + ID_B1 SINE B4 135 224 0 4 1189 351 171 49 29 chr17 79236923 79237001 -16035650 + ORR1D1 LTR MaLR 97 179 -191 4 1189 580 281 104 30 chr17 79237345 79237547 -16035104 - ID_B1 SINE B4 -4 220 4 4 1189 31 0 0 0 chr17 79237552 79237583 -16035068 + AT_rich Low_complexity Low_complexity 1 31 0 4 1189 441 281 31 8 chr17 79237608 79237737 -16034914 - RSINE1 SINE B4 -25 140 9 4 1189 663 219 7 27 chr17 79237807 79237957 -16034694 + B1_Mur3 SINE Alu 2 148 -1 4 1189 613 134 0 0 chr17 79239058 79239155 -16033496 + B1_Mur2 SINE Alu 40 136 -13 4 1189 441 0 0 0 chr17 79239158 79239207 -16033444 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 4 1189 265 225 48 36 chr17 79239679 79239762 -16032889 + PB1D10 SINE Alu 18 101 -16 4 1189 235 259 0 0 chr17 79241494 79241548 -16031103 + GA-rich Low_complexity Low_complexity 2 55 0 4 1189 242 282 88 25 chr17 79242058 79242138 -16030513 - MER20 DNA MER1_type -93 126 42 4 1189 450 301 55 0 chr17 79242387 79242533 -16030118 + RSINE1 SINE B4 12 165 0 4 1189 736 182 27 40 chr17 79242753 79242902 -16029749 + B1_Mur2 SINE Alu 3 149 0 4 1189 782 114 295 0 chr17 79243406 79243572 -16029079 + B3 SINE B2 1 215 -1 4 1189 676 215 62 0 chr17 79243678 79243808 -16028843 + B1_Mur1 SINE Alu 2 139 -10 4 1189 850 255 30 5 chr17 79244140 79244341 -16028310 - B3 SINE B2 -10 206 1 4 1189 215 250 0 72 chr17 79244838 79244907 -16027744 + ID4_ SINE ID 10 73 -10 4 1189 1106 112 59 0 chr17 79246222 79246391 -16026260 + B2_Mm1t SINE B2 1 179 -14 4 1189 269 108 456 19 chr17 79246465 79246568 -16026083 + B2_Mm2 SINE B2 47 194 -1 4 1189 205 250 39 24 chr17 79246987 79247114 -16025537 + (TA)n Simple_repeat Simple_repeat 1 129 0 4 1189 372 240 10 10 chr17 79247536 79247633 -16025018 + B3A SINE B2 99 195 -3 4 1189 764 273 76 22 chr17 79248066 79248343 -16024308 - RLTR41 LTR ERV1 0 446 155 4 1189 303 286 134 0 chr17 79251835 79251894 -16020757 - MTEb LTR MaLR 0 379 315 4 1189 219 69 0 0 chr17 79251894 79251923 -16020728 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 4 1189 303 286 134 0 chr17 79251923 79251975 -16020676 - MTEb LTR MaLR -65 314 255 4 1189 712 257 92 4 chr17 79252014 79252264 -16020387 - MTE-int LTR MaLR -73 1507 1236 4 1189 505 250 81 0 chr17 79252289 79252425 -16020226 - MTE-int LTR MaLR -1431 149 3 4 1189 7295 98 31 15 chr17 79252453 79253620 -16019031 - Lx LINE L1 -1 6653 5465 4 1189 314 261 59 25 chr17 79253622 79253740 -16018911 - MTEa LTR MaLR -8 371 250 4 1189 315 161 0 0 chr17 79253982 79254038 -16018613 + CT-rich Low_complexity Low_complexity 1 56 0 4 1189 396 0 0 0 chr17 79254065 79254109 -16018542 + (TCTG)n Simple_repeat Simple_repeat 1 44 0 4 1189 270 206 0 0 chr17 79255325 79255388 -16017263 + (TG)n Simple_repeat Simple_repeat 1 63 0 4 1189 1386 179 92 14 chr17 79256112 79256407 -16016244 + Lx5 LINE L1 6732 7049 -1 4 1189 571 269 161 7 chr17 79256497 79256789 -16015862 + L1M2 LINE L1 3988 4324 -1819 4 1189 707 231 118 0 chr17 79256793 79256979 -16015672 + B3 SINE B2 2 209 -7 4 1189 232 271 0 63 chr17 79257058 79257121 -16015530 + B4 SINE B4 81 139 -153 4 1189 599 134 42 51 chr17 79257078 79257196 -16015455 + B1_Mus1 SINE Alu 13 129 -19 4 1189 1250 249 45 10 chr17 79257197 79257595 -16015056 + L1_Mur3 LINE L1 4475 4886 -994 4 1189 270 73 0 0 chr17 79257761 79257802 -16014849 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 4 1189 855 125 14 22 chr17 79258044 79258183 -16014468 - B1_Mur4 SINE Alu -11 139 2 4 1189 742 70 0 0 chr17 79258294 79258394 -16014257 + 5S rRNA rRNA 22 121 0 4 1189 398 62 31 0 chr17 79258397 79258462 -16014189 + (CAGA)n Simple_repeat Simple_repeat 2 68 0 4 1189 343 282 0 56 chr17 79258746 79258836 -16013815 - RSINE1 SINE B4 -65 100 16 4 1189 35 31 0 44 chr17 79259932 79260000 -16012651 + AT_rich Low_complexity Low_complexity 1 65 0 4 1189 338 297 85 21 chr17 79260056 79260245 -16012406 - Charlie1a DNA MER1_type -178 1277 1077 4 1189 404 310 0 0 chr17 79260321 79260421 -16012230 - PB1D10 SINE Alu -7 110 11 4 1189 6834 97 12 100 chr17 79260851 79261234 -16011417 + MTB_Mm-int LTR MaLR 1 390 -708 4 1189 1146 81 0 20 chr17 79261234 79261385 -16011266 + B1_Mus1 SINE Alu 1 148 0 4 1189 6834 97 12 100 chr17 79261385 79262204 -16010447 + MTB_Mm-int LTR MaLR 391 1098 0 4 1189 2798 64 84 21 chr17 79262204 79262586 -16010065 + MTB_Mm LTR MaLR 1 406 -1 4 1189 400 239 252 7 chr17 79264004 79264147 -16008504 - B3A SINE B2 -15 183 6 4 1189 952 47 0 0 chr17 79264154 79264281 -16008370 + B1_Mm SINE Alu 11 137 -10 4 1189 351 0 0 0 chr17 79264281 79264320 -16008331 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 1189 370 184 85 0 chr17 79264360 79264449 -16008202 + B1F SINE Alu 20 117 0 4 1189 272 284 0 0 chr17 79266561 79266664 -16005987 + (TG)n Simple_repeat Simple_repeat 1 103 0 4 1189 288 269 0 37 chr17 79266667 79266748 -16005903 - B4A SINE B4 0 292 215 4 1189 852 150 14 0 chr17 79266754 79266894 -16005757 - B1_Mus2 SINE Alu -1 146 5 4 1189 1269 133 28 14 chr17 79266953 79267167 -16005484 - Lx2 LINE L1 -6 6991 6775 4 1189 531 82 0 0 chr17 79267167 79267240 -16005411 - Lx2 LINE L1 -354 6643 6571 4 1189 467 286 159 25 chr17 79267242 79267443 -16005208 - B4A SINE B4 -64 228 1 4 1189 689 175 6 18 chr17 79269414 79269583 -16003068 + GA-rich Low_complexity Low_complexity 1 167 0 4 1189 198 0 0 0 chr17 79270894 79270916 -16001735 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 4 1189 414 276 194 0 chr17 79271411 79271607 -16001044 - Tigger7 DNA MER2_type 0 2491 2258 4 1189 494 192 70 27 chr17 79271686 79271851 -16000800 - B3 SINE B2 -1 194 32 4 1189 1191 221 100 73 chr17 79271976 79272455 -16000196 + RMER13A LTR ERVK 122 613 -247 4 1189 1805 89 263 24 chr17 79272505 79272619 -16000032 - RLTR31B_Mm LTR ERVK -86 471 288 4 1189 207 0 0 0 chr17 79272619 79272642 -16000009 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1189 1191 43 0 0 chr17 79272642 79272781 -15999870 - B1_Mus1 SINE Alu -8 140 2 4 1189 1805 89 263 24 chr17 79272781 79273045 -15999606 - RLTR31B_Mm LTR ERVK -270 287 2 4 1189 21 36 0 0 chr17 79273573 79273601 -15999050 + AT_rich Low_complexity Low_complexity 1 28 0 4 1189 378 248 39 0 chr17 79273603 79273715 -15998936 - L1MA8 LINE L1 -9 6282 6168 4 1189 444 118 0 0 chr17 79273736 79273804 -15998847 + (TCC)n Simple_repeat Simple_repeat 1 68 0 4 1189 230 177 62 46 chr17 79273813 79273878 -15998773 - L1MA8 LINE L1 -131 6160 6095 4 1189 244 302 126 45 chr17 79273919 79274030 -15998621 + B1F1 SINE Alu 14 133 -16 4 1189 495 48 0 0 chr17 79274156 79274218 -15998433 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 1189 360 242 73 29 chr17 79274220 79274356 -15998295 - B3A SINE B2 -48 150 9 4 1189 250 250 0 19 chr17 79275029 79275082 -15997569 - ID SINE ID -138 86 35 4 1189 189 0 0 0 chr17 79275464 79275485 -15997166 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 1189 496 286 0 8 chr17 79275873 79275993 -15996658 - PB1D7 SINE Alu -1 119 1 4 1189 829 134 28 28 chr17 79275998 79276498 -15996153 + (TATG)n Simple_repeat Simple_repeat 1 499 0 4 1189 547 278 0 0 chr17 79276574 79276700 -15995951 - RSINE1 SINE B4 -38 127 2 4 1189 890 282 70 15 chr17 79277182 79277452 -15995199 - B4A SINE B4 -6 286 2 4 1189 231 261 0 0 chr17 79277957 79278026 -15994625 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 1189 4430 168 94 2 chr17 79278044 79278870 -15993781 + RMER19B LTR ERVK 1 902 0 4 1189 504 0 0 0 chr17 79278894 79278950 -15993701 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 1189 256 246 15 0 chr17 79278951 79279016 -15993635 + L1M LINE L1 5310 5375 -808 4 1189 254 230 104 17 chr17 79279006 79279121 -15993530 + L1MA4 LINE L1 6127 6251 -49 4 1189 287 309 25 0 chr17 79279199 79279280 -15993371 + ID SINE ID 1 83 -141 4 1189 592 153 368 0 chr17 79279308 79279471 -15993180 + URR1A DNA MER1_type 4 226 0 4 1189 186 284 43 29 chr17 79279500 79279569 -15993082 + L2 LINE L2 1976 2045 -1374 4 1189 269 296 124 32 chr17 79279609 79279794 -15992857 + L2 LINE L2 2140 2341 -1078 4 1189 452 228 210 14 chr17 79279795 79279933 -15992718 + RSINE1 SINE B4 1 165 0 4 1189 680 234 35 46 chr17 79279988 79280185 -15992466 + B3A SINE B2 4 198 0 4 1189 1231 107 11 21 chr17 79280192 79280383 -15992268 - B2_Mm2 SINE B2 -6 189 1 4 1189 206 179 0 18 chr17 79281445 79281502 -15991149 + G-rich Low_complexity Low_complexity 4 59 0 4 1189 1366 60 48 16 chr17 79282550 79282737 -15989914 + B2_Mm2 SINE B2 2 194 -1 4 1189 361 302 42 0 chr17 79283465 79283561 -15989090 - ID_B1 SINE B4 -3 221 122 4 1189 337 296 51 17 chr17 79283673 79283790 -15988861 - B1F1 SINE Alu -9 140 20 4 1189 1351 135 116 75 chr17 79284693 79285013 -15987638 + ORR1C1 LTR MaLR 1 333 -45 4 1189 351 197 141 0 chr17 79285016 79285087 -15987564 + PB1D9 SINE Alu 1 81 -39 4 1189 2279 190 41 9 chr17 79285088 79285555 -15987096 + RLTR12B LTR ERVK 47 528 0 4 1189 2530 42 3 0 chr17 79285785 79286093 -15986558 - L1_Mus1 LINE L1 0 6567 6259 4 1189 1065 60 0 8 chr17 79286093 79286227 -15986424 + L1_Mus1 LINE L1 6117 6249 -318 4 1189 321 89 0 0 chr17 79286285 79286330 -15986321 + (T)n Simple_repeat Simple_repeat 1 45 0 4 1189 442 194 63 21 chr17 79286359 79286454 -15986197 + B1F SINE Alu 41 139 -10 5 1189 487 271 35 14 chr17 79286507 79286649 -15986002 + RSINE1 SINE B4 4 148 -17 5 1189 379 88 44 0 chr17 79286659 79286727 -15985924 + (CATA)n Simple_repeat Simple_repeat 4 74 0 5 1189 237 233 50 0 chr17 79286844 79286904 -15985747 + L1M5 LINE L1 5842 5904 -220 5 1189 688 258 52 0 chr17 79287492 79287647 -15985004 + RSINE1 SINE B4 3 165 0 5 1189 499 185 18 5 chr17 79288832 79289060 -15983591 + (TG)n Simple_repeat Simple_repeat 1 231 0 5 1189 594 189 25 0 chr17 79289098 79289423 -15983228 + (TG)n Simple_repeat Simple_repeat 1 333 0 5 1189 246 289 22 0 chr17 79289481 79289571 -15983080 + L2a LINE L2 3056 3147 -279 5 1189 492 268 41 5 chr17 79290530 79290673 -15981978 - MTE2a LTR MaLR -1 378 225 5 1189 436 252 106 48 chr17 79291609 79291817 -15980834 + L1MA9 LINE L1 6048 6267 -45 5 1189 2081 127 116 12 chr17 79291849 79292256 -15980395 - RMER15 LTR ERVL 0 575 127 5 1189 405 358 62 50 chr17 79292539 79292701 -15979950 + Lx8 LINE L1 7132 7304 -169 5 1189 1806 189 76 0 chr17 79292701 79293045 -15979606 + ORR1D2 LTR MaLR 1 370 0 5 1189 405 358 62 50 chr17 79293045 79293220 -15979431 + Lx8 LINE L1 7305 7473 0 5 1189 1168 150 9 32 chr17 79293474 79293694 -15978957 + URR1B DNA MER1_type 11 225 0 5 1189 360 286 40 45 chr17 79293521 79293719 -15978932 - CYRA11_Mm Unknown Y-chromosome -272 345 149 5 1189 454 258 82 55 chr17 79295736 79295993 -15976658 + L1MA5 LINE L1 5635 5939 -361 5 1189 540 200 0 0 chr17 79295997 79296137 -15976514 + (TG)n Simple_repeat Simple_repeat 2 141 0 5 1189 434 235 0 0 chr17 79296656 79296737 -15975914 + ID4 SINE ID 1 81 -2 5 1189 400 292 7 0 chr17 79297006 79297216 -15975435 + (TG)n Simple_repeat Simple_repeat 1 211 0 5 1189 341 103 0 33 chr17 79297220 79297280 -15975371 + (TATG)n Simple_repeat Simple_repeat 4 61 0 5 1189 186 43 0 0 chr17 79297632 79297655 -15974996 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 1189 489 297 104 57 chr17 79297676 79297955 -15974696 - B4A SINE B4 0 292 1 5 1189 739 199 0 15 chr17 79297971 79298104 -15974547 - B1_Mus2 SINE Alu 0 147 17 5 1190 423 0 0 0 chr17 79299362 79299409 -15973242 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1190 2637 250 52 14 chr17 79299919 79300612 -15972039 + MYSERV6-int LTR ERVK 8064 8782 -177 5 1190 727 195 40 75 chr17 79300791 79300991 -15971660 + MYSERV-int LTR ERVK 6354 6546 -4 5 1190 692 288 74 64 chr17 79300992 79301397 -15971254 + BGLII_B LTR ERVK 15 423 -18 5 1190 730 282 6 11 chr17 79301734 79301913 -15970738 + B3 SINE B2 2 179 -37 5 1190 231 36 0 0 chr17 79301914 79301942 -15970709 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1190 22 35 0 0 chr17 79301954 79301983 -15970668 + AT_rich Low_complexity Low_complexity 1 29 0 5 1190 758 223 68 44 chr17 79301983 79302189 -15970462 - B3 SINE B2 -5 211 1 5 1190 1153 75 0 0 chr17 79303035 79303194 -15969457 + B2_Mm2 SINE B2 3 161 -34 5 1190 396 0 0 0 chr17 79303194 79303238 -15969413 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 5 1190 373 78 0 0 chr17 79303241 79303292 -15969359 + B2_Mm2 SINE B2 111 161 -34 5 1190 360 0 0 0 chr17 79303292 79303332 -15969319 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 5 1190 314 138 0 17 chr17 79303334 79303393 -15969258 + GA-rich Low_complexity Low_complexity 3 60 0 5 1190 21 36 0 0 chr17 79303483 79303511 -15969140 + AT_rich Low_complexity Low_complexity 1 28 0 5 1190 216 260 312 16 chr17 79304563 79304688 -15967963 + MIRc SINE MIR 39 203 -65 5 1190 361 287 29 10 chr17 79305223 79305325 -15967326 - PB1D10 SINE Alu -5 112 9 5 1190 238 284 122 0 chr17 79305561 79305635 -15967016 + PB1D7 SINE Alu 5 87 -33 5 1190 394 179 0 0 chr17 79307212 79307279 -15965372 - RLTR18B LTR ERVK -146 366 300 5 1190 811 115 30 15 chr17 79307329 79307461 -15965190 + B1_Mur4 SINE Alu 1 134 -16 5 1190 580 270 53 53 chr17 79307553 79307815 -15964836 + RLTR12B LTR ERVK 47 308 -220 5 1190 982 191 118 8 chr17 79308026 79308280 -15964371 - RLTR18B LTR ERVK -223 289 8 5 1190 400 119 0 15 chr17 79308543 79308611 -15964040 - ORR1B1 LTR MaLR -327 67 1 5 1190 2384 143 95 34 chr17 79309848 79310376 -15962275 - RLTR31_Mm LTR ERVK 0 561 2 5 1190 1496 280 35 100 chr17 79310591 79311262 -15961389 - Charlie12 DNA MER1_type 0 2873 2248 5 1190 2356 134 71 40 chr17 79311262 79311411 -15961240 - RMER6A LTR ERVK 0 756 612 5 1190 3343 53 2 0 chr17 79311411 79311806 -15960845 + MTA_Mm LTR MaLR 1 396 0 5 1190 2356 134 71 40 chr17 79311806 79312162 -15960489 - RMER6A LTR ERVK -145 611 235 5 1190 1129 254 57 33 chr17 79312165 79312622 -15960029 + RLTR20B3 LTR ERVK 17 482 -95 5 1190 279 220 0 0 chr17 79312659 79312709 -15959942 + RLTR20B3 LTR ERVK 472 521 -56 5 1190 1388 87 0 72 chr17 79312741 79312977 -15959674 - RMER6A LTR ERVK -515 241 23 5 1190 353 224 31 94 chr17 79312980 79313108 -15959543 - Charlie12 DNA MER1_type -627 2246 2127 5 1190 831 237 50 20 chr17 79313115 79313317 -15959334 - B3 SINE B2 -6 210 3 5 1190 1533 191 53 81 chr17 79313333 79313767 -15958884 + RLTR41 LTR ERV1 1 422 -24 5 1190 1462 268 104 24 chr17 79313765 79314340 -15958311 - Charlie12 DNA MER1_type -960 1913 1293 5 1190 1165 191 137 37 chr17 79314340 79314639 -15958012 - ORR1C2 LTR MaLR 0 384 56 5 1190 1164 48 36 0 chr17 79314675 79314840 -15957811 - B2_Mm1t SINE B2 -21 172 2 5 1190 1253 158 98 19 chr17 79314840 79315105 -15957546 - RMER19B LTR ERVK -16 886 601 5 1190 342 67 0 0 chr17 79315193 79315238 -15957413 + (CAAGC)n Simple_repeat Simple_repeat 3 47 0 5 1190 262 102 8 0 chr17 79315308 79315358 -15957293 - B1_Mur4 SINE Alu -1 149 96 5 1190 270 270 40 0 chr17 79315513 79315587 -15957064 - MER5A1 DNA MER1_type 0 166 90 5 1190 826 123 58 0 chr17 79318087 79318225 -15954426 + B1_Mur4 SINE Alu 5 150 0 5 1190 265 244 94 62 chr17 79319733 79319829 -15952822 + ID_B1 SINE B4 70 168 -56 5 1190 291 200 200 0 chr17 79319756 79319836 -15952815 + PB1D10 SINE Alu 6 101 -16 5 1190 221 0 0 33 chr17 79319842 79319872 -15952779 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5 1190 475 291 61 35 chr17 79320617 79320845 -15951806 + B4 SINE B4 8 241 -51 5 1190 263 228 35 0 chr17 79321240 79321297 -15951354 - ID4_ SINE ID -24 59 1 5 1190 277 205 84 0 chr17 79322831 79322914 -15949737 - PB1D10 SINE Alu -21 96 7 5 1190 233 267 89 0 chr17 79322835 79322925 -15949726 - ID_B1 SINE B4 -52 172 75 5 1190 210 236 18 18 chr17 79323017 79323073 -15949578 + ID4_ SINE ID 28 83 0 5 1190 977 139 29 6 chr17 79323533 79323707 -15948944 + Lx2B LINE L1 6822 6999 -1 5 1190 218 176 0 0 chr17 79323936 79323987 -15948664 - B1_Mus2 SINE Alu -5 142 92 5 1190 345 302 52 62 chr17 79324206 79324400 -15948251 - B3A SINE B2 -6 192 1 5 1190 419 148 182 0 chr17 79325987 79326075 -15946576 + B1_Mur4 SINE Alu 47 150 0 5 1190 183 42 0 0 chr17 79326108 79326132 -15946519 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1190 1161 78 7 0 chr17 79326337 79326512 -15946139 + B2_Mm2 SINE B2 1 186 -7 5 1190 624 286 163 58 chr17 79326567 79326716 -15945935 - Charlie1 DNA MER1_type -1 2780 2617 5 1190 1030 208 14 14 chr17 79326716 79326931 -15945720 + B3 SINE B2 1 215 -1 5 1190 624 286 163 58 chr17 79326931 79327370 -15945281 - Charlie1 DNA MER1_type -165 2616 2130 5 1190 1017 0 0 0 chr17 79327995 79328108 -15944543 + (TTTTC)n Simple_repeat Simple_repeat 2 114 0 5 1190 1168 30 0 0 chr17 79328108 79328243 -15944408 - B1_Mus1 SINE Alu -12 136 2 5 1190 411 21 0 0 chr17 79329172 79329220 -15943431 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1190 317 317 13 53 chr17 79329223 79329373 -15943278 - RSINE1 SINE B4 -21 144 1 5 1190 1063 80 31 0 chr17 79329486 79329648 -15943003 + B2_Mm2 SINE B2 29 195 0 5 1190 1177 175 24 0 chr17 79329925 79330136 -15942515 + B3 SINE B2 1 216 0 5 1190 495 183 113 0 chr17 79332015 79332130 -15940521 + B1_Mur1 SINE Alu 21 148 -1 5 1190 271 65 43 0 chr17 79332619 79332665 -15939986 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1190 477 281 26 0 chr17 79332691 79332805 -15939846 - RSINE1 SINE B4 -46 119 3 5 1190 254 291 152 38 chr17 79333115 79333129 -15939522 + ID_B1 SINE B4 78 224 0 5 1190 459 259 0 51 chr17 79333129 79333247 -15939404 + PB1D9 SINE Alu 9 120 0 5 1190 243 0 0 0 chr17 79333533 79333560 -15939091 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1190 210 222 0 0 chr17 79333771 79333825 -15938826 + (TATG)n Simple_repeat Simple_repeat 4 57 0 5 1190 189 0 0 0 chr17 79333829 79333850 -15938801 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1190 514 242 73 0 chr17 79335706 79335830 -15936821 + RSINE1 SINE B4 3 135 -30 5 1190 312 299 52 0 chr17 79337254 79337351 -15935300 - B1F1 SINE Alu -47 102 1 5 1190 1287 55 0 0 chr17 79338131 79338277 -15934374 + B1_Mus1 SINE Alu 3 148 0 5 1190 213 121 0 0 chr17 79338277 79338310 -15934341 + (A)n Simple_repeat Simple_repeat 1 33 0 5 1190 270 0 0 0 chr17 79338772 79338802 -15933849 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1190 782 253 137 0 chr17 79339179 79339412 -15933239 - B4A SINE B4 -18 274 10 5 1190 28 29 0 0 chr17 79339605 79339640 -15933011 + AT_rich Low_complexity Low_complexity 1 35 0 5 1190 207 0 0 0 chr17 79339668 79339691 -15932960 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5 1190 1216 55 7 7 chr17 79339691 79339828 -15932823 - B1_Mus1 SINE Alu -9 139 2 5 1190 22 0 0 0 chr17 79339916 79339938 -15932713 + AT_rich Low_complexity Low_complexity 1 22 0 5 1190 180 0 0 0 chr17 79340090 79340110 -15932541 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 5 1190 1036 85 59 0 chr17 79340110 79340263 -15932388 - B2_Mm2 SINE B2 -33 162 1 5 1190 1383 200 61 116 chr17 79340965 79341361 -15931290 + ORR1D1 LTR MaLR 1 374 0 5 1190 212 175 0 0 chr17 79341366 79341406 -15931245 + T-rich Low_complexity Low_complexity 1 40 0 6 1190 1071 183 37 18 chr17 79342231 79342448 -15930203 + URR1A DNA MER1_type 6 226 0 6 1190 472 248 111 0 chr17 79343791 79343908 -15928743 - B3 SINE B2 -86 130 1 6 1190 846 68 0 0 chr17 79344806 79344924 -15927727 + (TTTC)n Simple_repeat Simple_repeat 2 119 0 6 1190 1215 57 0 0 chr17 79344926 79345067 -15927584 - B1_Mm SINE Alu -6 141 1 6 1190 582 94 160 0 chr17 79345111 79345217 -15927434 + B1_Mus1 SINE Alu 10 132 -16 6 1190 1334 34 0 0 chr17 79346561 79346707 -15925944 + B1_Mus1 SINE Alu 2 147 -1 6 1190 546 74 0 36 chr17 79347487 79347571 -15925080 - B2_Mm2 SINE B2 -114 81 1 6 1190 286 299 142 150 chr17 79347765 79347971 -15924680 - B4A SINE B4 -30 262 57 6 1190 1328 75 81 0 chr17 79347971 79348144 -15924507 - B2_Mm2 SINE B2 -6 189 3 6 1190 286 299 142 150 chr17 79348144 79348197 -15924454 - B4A SINE B4 -236 56 5 6 1190 290 264 69 91 chr17 79349662 79349837 -15922814 - MIRc SINE MIR -74 194 24 6 1190 213 286 150 9 chr17 79352303 79352416 -15920235 + MIR SINE MIR 14 142 -120 6 1190 956 177 0 0 chr17 79353530 79353677 -15918974 + B1_Mur1 SINE Alu 2 148 -1 6 1190 3436 96 111 2 chr17 79354399 79354930 -15917721 + MT2B LTR ERVL 13 601 0 6 1190 380 248 132 26 chr17 79356062 79356238 -15916413 + B3 SINE B2 5 216 0 6 1190 1282 48 0 0 chr17 79357352 79357499 -15915152 - B1_Mus2 SINE Alu 0 147 1 6 1190 333 254 50 42 chr17 79357779 79357898 -15914753 + PB1D7 SINE Alu 1 120 0 6 1190 1221 145 80 28 chr17 79359422 79359635 -15913016 + URR1A DNA MER1_type 3 226 0 6 1190 544 181 65 19 chr17 79360756 79360863 -15911788 + PB1D9 SINE Alu 1 112 -8 6 1190 631 213 285 13 chr17 79361035 79361263 -15911388 + B4 SINE B4 3 292 0 6 1190 312 172 0 0 chr17 79361263 79361321 -15911330 + (CACG)n Simple_repeat Simple_repeat 3 60 0 6 1190 1215 200 5 0 chr17 79362376 79362581 -15910070 + B3 SINE B2 7 212 -4 6 1190 362 275 178 58 chr17 79363084 79363343 -15909308 + B4A SINE B4 3 292 0 6 1190 1124 36 63 28 chr17 79363413 79363556 -15909095 - B1_Mus1 SINE Alu 0 148 1 6 1190 624 264 0 14 chr17 79363563 79363709 -15908942 - B1_Mur2 SINE Alu 0 149 6 6 1190 22 0 0 0 chr17 79364591 79364613 -15908038 + AT_rich Low_complexity Low_complexity 1 22 0 6 1190 643 198 111 0 chr17 79364787 79364913 -15907738 - B1_Mur1 SINE Alu -5 144 5 6 1190 585 0 0 0 chr17 79365260 79365325 -15907326 + (CA)n Simple_repeat Simple_repeat 2 66 0 6 1190 248 270 81 90 chr17 79366013 79366057 -15906594 - RMER17A LTR ERVK -159 592 438 6 1190 301 157 214 92 chr17 79366057 79366155 -15906496 + B4 SINE B4 115 224 -68 6 1190 402 79 0 0 chr17 79366155 79366218 -15906433 + (TG)n Simple_repeat Simple_repeat 1 63 0 6 1190 1004 210 80 0 chr17 79366218 79366418 -15906233 + B3 SINE B2 1 216 0 6 1190 248 270 81 90 chr17 79366418 79366608 -15906043 - RMER17A LTR ERVK -314 437 263 6 1190 180 0 0 0 chr17 79366695 79366715 -15905936 + (CA)n Simple_repeat Simple_repeat 2 21 0 6 1190 992 182 193 0 chr17 79366900 79367081 -15905570 + B3 SINE B2 1 216 0 6 1190 1321 263 164 15 chr17 79367952 79368488 -15904163 + Lx8 LINE L1 6851 7466 -7 6 1190 1110 187 71 5 chr17 79368606 79368816 -15903835 - URR1B DNA MER1_type -1 224 1 6 1190 21 0 0 0 chr17 79368897 79368918 -15903733 + AT_rich Low_complexity Low_complexity 1 21 0 6 1190 665 277 167 7 chr17 79369513 79369789 -15902862 - Lx8 LINE L1 0 7473 7154 6 1190 692 229 85 41 chr17 79369804 79370050 -15902601 - Lx8 LINE L1 -374 7099 6843 6 1190 343 303 136 25 chr17 79370138 79370356 -15902295 - MIR SINE MIR -13 249 15 6 1190 393 140 0 0 chr17 79372036 79372093 -15900558 - ID4 SINE ID -10 73 17 6 1190 273 214 42 0 chr17 79372093 79372194 -15900457 + L1MB7 LINE L1 5221 5325 -839 6 1190 1363 284 55 18 chr17 79372188 79372733 -15899918 + L1MB7 LINE L1 5536 6100 -84 6 1190 507 238 76 8 chr17 79373266 79373397 -15899254 + MLT1A0 LTR MaLR 226 365 0 6 1190 285 364 42 1 chr17 79373613 79373731 -15898920 + MIR SINE MIR 2 124 -84 6 1190 34 42 0 0 chr17 79374025 79374073 -15898578 + AT_rich Low_complexity Low_complexity 1 48 0 6 1190 186 359 65 19 chr17 79374257 79374365 -15898286 + MIRb SINE MIR 45 157 -111 6 1190 4513 208 35 32 chr17 79375164 79376179 -15896472 + Lx5 LINE L1 5723 7050 0 6 1190 501 104 0 0 chr17 79376649 79376726 -15895925 + (TC)n Simple_repeat Simple_repeat 2 78 0 6 1190 423 0 0 0 chr17 79376726 79376773 -15895878 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1190 423 0 0 0 chr17 79377892 79377939 -15894712 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1190 723 71 0 0 chr17 79378349 79378447 -15894204 + (TCTA)n Simple_repeat Simple_repeat 2 99 0 6 1190 427 312 74 31 chr17 79378643 79378805 -15893846 - 7SK RNA RNA -162 169 1 6 1190 680 289 12 0 chr17 79378821 79378994 -15893657 + MER2 DNA MER2_type 169 343 -2 6 1190 183 379 50 40 chr17 79379604 79379703 -15892948 + MIRc SINE MIR 20 119 -149 6 1190 322 306 61 56 chr17 79380296 79380493 -15892158 + MLT2B5 LTR ERVL 126 323 -278 6 1190 314 382 82 0 chr17 79380510 79380646 -15892005 + MLT2B5 LTR ERVL 364 512 -42 6 1190 933 67 0 0 chr17 79380646 79380780 -15891871 + (CA)n Simple_repeat Simple_repeat 2 135 0 6 1190 314 382 82 0 chr17 79380780 79380813 -15891838 + MLT2B5 LTR ERVL 513 546 -8 6 1190 405 287 0 0 chr17 79381509 79381596 -15891055 + MER5A DNA MER1_type 43 129 -60 6 1190 711 200 207 16 chr17 79381856 79382049 -15890602 - B4 SINE B4 -55 237 8 6 1190 640 291 95 5 chr17 79382139 79382329 -15890322 - B3 SINE B2 -9 207 1 6 1190 355 294 53 35 chr17 79382329 79382442 -15890209 + MER58B DNA MER1_type 224 338 -3 6 1190 201 374 150 24 chr17 79382595 79382762 -15889889 - MIRb SINE MIR -46 222 35 6 1190 23 0 0 0 chr17 79382998 79383021 -15889630 + AT_rich Low_complexity Low_complexity 1 23 0 6 1190 370 228 25 0 chr17 79383217 79383296 -15889355 - RSINE1 SINE B4 -17 148 68 6 1190 353 263 30 0 chr17 79385368 79385467 -15887184 - Charlie5 DNA MER1_type -2520 104 3 6 1190 434 219 56 28 chr17 79385760 79385868 -15886783 - PB1D9 SINE Alu 0 120 10 6 1190 22 99 0 0 chr17 79385877 79385948 -15886703 + AT_rich Low_complexity Low_complexity 1 71 0 6 1190 24 0 0 0 chr17 79386428 79386452 -15886199 + AT_rich Low_complexity Low_complexity 1 24 0 6 1190 29 47 0 0 chr17 79386656 79386699 -15885952 + AT_rich Low_complexity Low_complexity 1 43 0 6 1190 23 33 0 0 chr17 79387672 79387702 -15884949 + AT_rich Low_complexity Low_complexity 1 30 0 6 1190 1147 131 122 108 chr17 79387823 79388045 -15884606 + URR1B DNA MER1_type 1 225 0 6 1190 428 278 91 32 chr17 79388517 79388736 -15883915 + Lx8 LINE L1 6970 7201 -272 6 1190 429 115 302 50 chr17 79388756 79388875 -15883776 - B2_Mm2 SINE B2 0 195 47 6 1190 1233 91 11 6 chr17 79388923 79389099 -15883552 - B2_Mm1t SINE B2 -14 179 3 6 1190 315 253 110 50 chr17 79389111 79389311 -15883340 + Lx8 LINE L1 7236 7447 -26 6 1190 977 113 33 22 chr17 79389378 79389559 -15883092 + B2_Mm2 SINE B2 2 184 -11 6 1190 716 242 215 28 chr17 79389580 79389975 -15882676 - L1MC3 LINE L1 -17 7768 7300 6 1190 337 217 107 12 chr17 79389985 79390069 -15882582 - B4 SINE B4 -200 92 1 6 1190 342 335 73 17 chr17 79390229 79390439 -15882212 - L1M5 LINE L1 -383 5741 5522 6 1190 341 319 92 33 chr17 79390439 79390711 -15881940 + B4A SINE B4 1 288 -4 6 1190 342 335 73 17 chr17 79390711 79390734 -15881917 - L1M5 LINE L1 -603 5521 5496 6 1190 226 289 8 88 chr17 79390991 79391116 -15881535 + MT2B2 LTR ERVL 132 246 -338 6 1190 456 271 83 0 chr17 79391029 79391162 -15881489 + ID_B1 SINE B4 81 224 0 6 1190 23 0 0 0 chr17 79391999 79392022 -15880629 + AT_rich Low_complexity Low_complexity 1 23 0 6 1190 285 161 0 0 chr17 79392991 79393025 -15879626 + (TA)n Simple_repeat Simple_repeat 2 35 0 6 1190 309 51 0 0 chr17 79393025 79393064 -15879587 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1190 285 161 0 0 chr17 79393064 79393085 -15879566 + (TA)n Simple_repeat Simple_repeat 1 21 0 6 1190 373 213 27 0 chr17 79394078 79394153 -15878498 + ID4_ SINE ID 1 77 -6 6 1190 216 200 0 0 chr17 79395121 79395166 -15877485 + T-rich Low_complexity Low_complexity 1 45 0 6 1190 884 135 8 0 chr17 79395551 79395677 -15876974 - B3 SINE B2 -88 128 2 6 1190 31 26 0 0 chr17 79395677 79395715 -15876936 + AT_rich Low_complexity Low_complexity 1 38 0 6 1190 242 263 0 26 chr17 79395787 79395865 -15876786 + (TG)n Simple_repeat Simple_repeat 1 76 0 6 1190 198 0 0 0 chr17 79395879 79395901 -15876750 + (TG)n Simple_repeat Simple_repeat 2 23 0 6 1190 303 329 0 0 chr17 79395966 79396039 -15876612 - B3 SINE B2 -143 73 1 6 1190 1130 178 14 55 chr17 79396055 79396275 -15876376 - B3 SINE B2 -5 211 1 6 1190 377 221 121 12 chr17 79396829 79396927 -15875724 - B1F SINE Alu -13 114 5 6 1190 211 313 132 0 chr17 79397232 79397315 -15875336 - MIR SINE MIR -168 94 1 6 1190 689 299 35 0 chr17 79398565 79398766 -15873885 - MER82 DNA MER2_type -442 211 4 6 1190 282 241 161 38 chr17 79398923 79399058 -15873593 - MER58B DNA MER1_type -19 322 248 6 1190 1106 235 56 89 chr17 79399058 79399450 -15873201 + MTE2a LTR MaLR 1 379 0 6 1190 242 273 201 75 chr17 79399450 79399488 -15873163 - MER58C DNA MER1_type -176 39 1 6 1190 330 312 64 0 chr17 79399656 79399765 -15872886 - Tigger5 DNA MER2_type 0 2406 2291 6 1190 360 323 183 20 chr17 79399761 79399963 -15872688 - Tigger5 DNA MER2_type -2164 242 8 6 1190 198 0 0 0 chr17 79400115 79400137 -15872514 + (TA)n Simple_repeat Simple_repeat 1 22 0 6 1190 234 0 0 0 chr17 79400137 79400162 -15872489 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 1190 661 253 56 61 chr17 79400313 79400511 -15872140 + B3A SINE B2 2 198 0 6 1190 1075 216 109 11 chr17 79400644 79400929 -15871722 + ORR1D1 LTR MaLR 62 374 0 6 1190 21 0 0 0 chr17 79400960 79400981 -15871670 + AT_rich Low_complexity Low_complexity 1 21 0 7 1190 555 16 0 0 chr17 79401007 79401071 -15871580 + (TG)n Simple_repeat Simple_repeat 1 64 0 7 1190 253 286 0 0 chr17 79401094 79401157 -15871494 - B4 SINE B4 -124 168 106 7 1190 411 319 70 37 chr17 79401158 79401373 -15871278 + L1ME1 LINE L1 3172 3393 -2753 7 1190 1392 231 72 72 chr17 79401410 79401610 -15871041 - MTD LTR MaLR -14 405 211 7 1190 746 144 17 0 chr17 79401610 79401728 -15870923 - PB1D9 SINE Alu 0 120 1 7 1190 1392 231 72 72 chr17 79401728 79401932 -15870719 - MTD LTR MaLR -209 210 1 7 1190 302 301 126 68 chr17 79401945 79402152 -15870499 + L1ME1 LINE L1 3440 3658 -2488 7 1190 336 256 127 24 chr17 79402231 79402665 -15869986 + L1ME1 LINE L1 3641 4144 -2002 7 1190 326 173 52 3 chr17 79402938 79403036 -15869615 + L1ME1 LINE L1 4633 4735 -1411 7 1190 312 330 46 46 chr17 79403064 79403280 -15869371 + L1ME1 LINE L1 4780 4995 -1151 7 1190 499 283 79 76 chr17 79403411 79403515 -15869136 + L1MA7 LINE L1 5843 5945 -346 7 1190 900 56 0 14 chr17 79403515 79403660 -15868991 + L1_Mus4 LINE L1 6492 6634 -2 7 1190 499 283 79 76 chr17 79403660 79403922 -15868729 + L1MA7 LINE L1 5946 6209 -82 7 1190 816 250 144 17 chr17 79404011 79404325 -15868326 - MTD LTR MaLR -35 344 1 7 1190 327 315 94 47 chr17 79404553 79405106 -15867545 + L1ME1 LINE L1 5601 6179 0 7 1190 728 252 0 7 chr17 79405116 79405260 -15867391 + B3A SINE B2 1 143 -55 7 1190 576 0 0 0 chr17 79405263 79405327 -15867324 + (CA)n Simple_repeat Simple_repeat 1 64 0 7 1190 549 0 0 0 chr17 79405327 79405387 -15867264 + (GA)n Simple_repeat Simple_repeat 2 62 0 7 1190 509 282 18 0 chr17 79406401 79406511 -15866140 - RSINE1 SINE B4 -29 136 25 7 1190 188 338 40 13 chr17 79406680 79406755 -15865896 + MIRm SINE MIR 80 156 -120 7 1190 1976 156 17 25 chr17 79406788 79407144 -15865507 + ORR1D1 LTR MaLR 1 353 -21 7 1190 816 229 30 35 chr17 79407391 79407590 -15865061 - B3A SINE B2 0 198 1 7 1190 242 268 18 0 chr17 79407798 79407854 -15864797 + L2c LINE L2 3270 3326 -61 7 1190 3014 195 58 80 chr17 79407984 79408438 -15864213 + RMER17A2 LTR ERVK 26 448 -458 7 1190 1255 67 0 17 chr17 79408438 79408619 -15864032 + (TCTCC)n Simple_repeat Simple_repeat 1 178 0 7 1190 3014 195 58 80 chr17 79408619 79409044 -15863607 + RMER17A2 LTR ERVK 449 886 -20 7 1190 266 211 170 71 chr17 79410392 79410504 -15862147 + PB1 SINE Alu 3 125 -2 7 1190 862 266 76 14 chr17 79410781 79411056 -15861595 - B4A SINE B4 0 292 1 7 1190 365 221 96 0 chr17 79411218 79411322 -15861329 + Lx4B LINE L1 6927 7040 -18 7 1190 222 128 0 0 chr17 79411322 79411361 -15861290 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 7 1190 492 266 26 9 chr17 79413163 79413277 -15859374 - PB1 SINE Alu -11 116 1 7 1190 434 188 0 10 chr17 79413812 79413909 -15858742 + GA-rich Low_complexity Low_complexity 2 97 0 7 1190 374 344 53 15 chr17 79414276 79414409 -15858242 - MIR3 SINE MIR -67 141 4 7 1190 422 291 55 0 chr17 79414583 79414693 -15857958 - ID_B1 SINE B4 -1 223 108 7 1190 904 163 214 0 chr17 79414911 79415089 -15857562 + B3 SINE B2 1 216 0 7 1190 189 0 0 0 chr17 79415936 79415957 -15856694 + (CA)n Simple_repeat Simple_repeat 2 22 0 7 1190 348 24 0 0 chr17 79415957 79415997 -15856654 + (GA)n Simple_repeat Simple_repeat 2 42 0 7 1190 184 303 123 94 chr17 79417110 79417281 -15855370 - L2b LINE L2 -57 3318 3143 7 1190 227 31 31 0 chr17 79419430 79419462 -15853189 + (TTA)n Simple_repeat Simple_repeat 2 34 0 7 1190 202 207 35 35 chr17 79419787 79419902 -15852749 + (CCGCG)n Simple_repeat Simple_repeat 5 119 0 7 1190 50 0 0 0 chr17 79420175 79420225 -15852426 + GC_rich Low_complexity Low_complexity 1 50 0 7 1190 190 55 0 53 chr17 79421310 79421348 -15851303 + (GGGA)n Simple_repeat Simple_repeat 2 37 0 7 1190 1473 39 0 0 chr17 79421456 79421636 -15851015 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 1190 180 0 0 0 chr17 79422124 79422144 -15850507 + (T)n Simple_repeat Simple_repeat 1 20 0 7 1190 725 104 113 0 chr17 79422903 79423018 -15849633 - B1_Mus2 SINE Alu -1 146 19 7 1190 185 170 64 0 chr17 79423966 79424013 -15848638 + MIR SINE MIR 142 191 -71 7 1190 830 169 118 16 chr17 79425378 79425565 -15847086 + B3 SINE B2 5 210 -6 7 1190 270 125 0 0 chr17 79425959 79426007 -15846644 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 1190 373 289 153 82 chr17 79426015 79426185 -15846466 - B4A SINE B4 0 292 111 7 1190 471 183 12 0 chr17 79426186 79426268 -15846383 - B1_Mur2 SINE Alu -36 113 31 7 1190 317 287 19 47 chr17 79426195 79426301 -15846350 - MT2B LTR ERVL -344 257 155 7 1190 340 208 0 19 chr17 79426690 79426793 -15845858 + (TA)n Simple_repeat Simple_repeat 2 102 0 7 1190 3628 207 120 49 chr17 79427294 79428293 -15844358 - MTC-int LTR MaLR 0 1258 189 7 1190 2449 202 29 15 chr17 79428309 79428390 -15844261 - RLTR20A LTR ERVK -16 525 446 7 1190 504 0 0 0 chr17 79428390 79428446 -15844205 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 1190 2449 202 29 15 chr17 79428446 79428882 -15843769 - RLTR20A LTR ERVK -96 445 2 7 1190 1121 109 100 4 chr17 79428884 79429115 -15843536 - MYSERV16_I-int LTR ERVK -2 2324 2072 7 1190 350 219 8 48 chr17 79429118 79429243 -15843408 + (TATAA)n Simple_repeat Simple_repeat 5 124 0 7 1190 1164 62 7 0 chr17 79429253 79429399 -15843252 - B1_Mus1 SINE Alu -1 147 1 7 148 2813 138 12 14 chr17 79429399 79429908 -15842743 - MYSERV16_I-int LTR ERVK -245 2081 1574 7 1191 867 183 48 38 chr17 79429914 79430124 -15842527 - MTC-int LTR MaLR -1046 212 1 7 1191 2150 173 64 2 chr17 79430128 79430521 -15842130 - MTC LTR MaLR -4 417 1 7 1191 293 275 11 32 chr17 79432018 79432112 -15840539 + MLT1A1 LTR MaLR 1 92 -316 7 1191 265 270 16 0 chr17 79432217 79432280 -15840371 - tRNA-Ala-GCA tRNA tRNA -9 66 3 7 1191 294 156 43 107 chr17 79432298 79432485 -15840166 + (CACTA)n Simple_repeat Simple_repeat 4 178 0 7 1191 265 144 64 64 chr17 79432408 79432564 -15840087 + (CA)n Simple_repeat Simple_repeat 2 157 0 7 1191 1325 7 0 7 chr17 79432759 79432914 -15839737 + (TTTCC)n Simple_repeat Simple_repeat 3 156 0 7 1191 350 339 183 0 chr17 79433169 79433284 -15839367 - B1F1 SINE Alu -13 136 1 7 1191 246 341 158 29 chr17 79433284 79433324 -15839327 - ID_B1 SINE B4 -125 99 42 7 1191 266 196 37 0 chr17 79433384 79433491 -15839160 + (TA)n Simple_repeat Simple_repeat 1 111 0 7 1191 188 135 27 0 chr17 79433490 79433527 -15839124 + GA-rich Low_complexity Low_complexity 2 39 0 7 1191 684 231 13 45 chr17 79433961 79434115 -15838536 + B1_Mur1 SINE Alu 1 149 0 7 1191 1244 89 0 6 chr17 79434321 79434502 -15838149 + (CAGAC)n Simple_repeat Simple_repeat 1 180 0 7 1191 221 280 0 0 chr17 79434880 79434930 -15837721 + MER5B DNA MER1_type 3 52 -126 7 1191 3017 260 80 27 chr17 79435019 79436082 -15836569 - Charlie1 DNA MER1_type 0 2781 1663 7 1191 804 298 91 74 chr17 79436205 79437410 -15835241 + L1MEc LINE L1 192 1416 -4984 7 1191 542 284 62 8 chr17 79437438 79437612 -15835039 + B3A SINE B2 26 207 -9 7 1191 487 254 0 92 chr17 79437647 79437799 -15834852 + B1_Mur2 SINE Alu 2 139 -10 7 1191 369 285 189 26 chr17 79437854 79438203 -15834448 + L1MEc LINE L1 1452 1857 -4543 7 1191 243 140 0 66 chr17 79438484 79438545 -15834106 + A-rich Low_complexity Low_complexity 4 60 0 7 1191 759 232 58 34 chr17 79438597 79438802 -15833849 - B3 SINE B2 -5 211 2 7 1191 642 332 56 54 chr17 79438856 79439462 -15833189 + L1MEc LINE L1 2444 3067 -3252 7 1191 549 265 58 23 chr17 79439462 79439636 -15833015 + B3A SINE B2 1 180 -18 7 1191 642 332 56 54 chr17 79439636 79439925 -15832726 + L1MEc LINE L1 3068 3341 -2978 7 1191 306 264 50 101 chr17 79439961 79440100 -15832551 + L1MEc LINE L1 5626 5757 -590 7 1191 1236 54 0 0 chr17 79440330 79440477 -15832174 + B1_Mm SINE Alu 1 147 0 7 1191 198 0 0 0 chr17 79440477 79440499 -15832152 + (A)n Simple_repeat Simple_repeat 1 22 0 7 1191 26 50 0 0 chr17 79440525 79440565 -15832086 + AT_rich Low_complexity Low_complexity 1 40 0 7 1191 354 368 46 7 chr17 79440658 79440811 -15831840 - B4A SINE B4 -133 159 1 7 1191 25 75 0 0 chr17 79440919 79440972 -15831679 + AT_rich Low_complexity Low_complexity 1 53 0 7 1191 293 298 85 19 chr17 79442645 79442751 -15829900 + LTR16A LTR ERVL 18 130 -321 7 1191 255 287 129 9 chr17 79442834 79442950 -15829701 + LTR16A LTR ERVL 320 449 -2 7 1191 333 0 0 0 chr17 79443120 79443157 -15829494 + (TC)n Simple_repeat Simple_repeat 1 37 0 7 1191 291 54 0 0 chr17 79443306 79443343 -15829308 + (CAA)n Simple_repeat Simple_repeat 3 39 0 7 1191 40625 24 1 6 chr17 79443441 79449568 -15823083 - L1Md_T LINE L1 -2 6580 491 7 1191 447 95 0 0 chr17 79449724 79449798 -15822853 + (TG)n Simple_repeat Simple_repeat 2 75 0 7 1191 220 294 191 0 chr17 79450006 79450074 -15822577 - ID4_ SINE ID -1 82 2 7 1191 402 295 29 51 chr17 79450255 79450430 -15822221 - MER2 DNA MER2_type -5 340 170 7 1191 1266 126 85 24 chr17 79450771 79450982 -15821669 + URR1A DNA MER1_type 3 226 0 7 1191 938 92 14 0 chr17 79451200 79451342 -15821309 + (TTCC)n Simple_repeat Simple_repeat 4 147 0 7 1191 1516 268 99 7 chr17 79452984 79453398 -15819253 - Lx6 LINE L1 -4 7456 7005 7 1191 369 131 0 0 chr17 79454129 79454190 -15818461 + (TG)n Simple_repeat Simple_repeat 1 61 0 7 1191 537 16 0 0 chr17 79454316 79454378 -15818273 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 7 1191 186 43 0 0 chr17 79454625 79454648 -15818003 + (A)n Simple_repeat Simple_repeat 1 23 0 7 1191 438 20 0 0 chr17 79454724 79454775 -15817876 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1191 251 256 128 0 chr17 79454812 79454890 -15817761 + MIR SINE MIR 172 259 -3 7 1191 540 262 0 26 chr17 79456067 79456220 -15816431 - B1F2 SINE Alu 0 149 1 7 1191 1194 176 13 13 chr17 79456343 79456568 -15816083 - URR1B DNA MER1_type 0 225 1 7 1191 715 300 77 57 chr17 79456940 79457293 -15815358 + MTE2b LTR MaLR 1 360 -19 7 1191 280 302 113 0 chr17 79457572 79457678 -15814973 - RSINE1 SINE B4 -46 119 2 7 1191 702 72 0 0 chr17 79458824 79458921 -15813730 + (TG)n Simple_repeat Simple_repeat 2 98 0 7 1191 625 257 0 7 chr17 79458922 79459063 -15813588 - RSINE1 SINE B4 -24 141 2 7 1191 259 197 39 26 chr17 79459256 79459334 -15813317 + MIR3 SINE MIR 117 195 -13 7 1191 452 280 82 15 chr17 79459368 79459564 -15813087 - MIRb SINE MIR -38 230 22 7 1191 226 268 79 40 chr17 79459733 79459834 -15812817 + MusHAL1 LINE L1 172 276 -3078 7 1191 424 209 11 11 chr17 79460170 79460262 -15812389 + B4A SINE B4 2 93 -199 7 1191 2415 126 35 20 chr17 79460376 79460782 -15811869 - MTC LTR MaLR -8 413 2 7 1191 900 26 0 0 chr17 79460782 79460894 -15811757 + B1_Mus1 SINE Alu 31 142 -6 8 1191 207 0 0 0 chr17 79460896 79460919 -15811732 + (CAA)n Simple_repeat Simple_repeat 2 24 0 8 1191 779 243 97 5 chr17 79460936 79461122 -15811529 - B3 SINE B2 -13 203 1 8 1191 519 198 215 0 chr17 79461293 79461414 -15811237 + B1_Mur1 SINE Alu 3 149 0 8 1191 207 0 0 0 chr17 79461414 79461437 -15811214 + (CAAAAA)n Simple_repeat Simple_repeat 6 28 0 8 1191 382 207 35 13 chr17 79461449 79461561 -15811090 - MER33 DNA MER1_type -216 108 1 8 1191 1395 118 34 15 chr17 79461788 79461962 -15810689 - BGLII LTR ERVK 0 421 245 8 1191 1305 83 0 0 chr17 79461962 79462142 -15810509 + (TTC)n Simple_repeat Simple_repeat 1 180 0 8 1191 1395 118 34 15 chr17 79462142 79462233 -15810418 - BGLII LTR ERVK -177 244 151 8 1191 294 29 0 0 chr17 79462233 79462268 -15810383 + (TCC)n Simple_repeat Simple_repeat 2 36 0 8 1191 1420 98 52 8 chr17 79462268 79462516 -15810135 - BGLII LTR ERVK -162 259 1 8 1191 307 264 0 0 chr17 79462516 79462585 -15810066 - PB1D10 SINE Alu -18 99 31 8 1191 378 0 0 0 chr17 79462620 79462662 -15809989 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 1191 656 212 68 0 chr17 79462663 79462795 -15809856 - RSINE1 SINE B4 -22 143 3 8 1191 189 94 0 0 chr17 79463000 79463032 -15809619 + (TTTTTG)n Simple_repeat Simple_repeat 6 37 0 8 1191 1188 56 0 0 chr17 79463032 79463174 -15809477 - B1_Mm SINE Alu -5 142 1 8 1191 3036 142 21 8 chr17 79464437 79464525 -15808126 - RLTR20C LTR ERVK 0 534 446 8 1191 309 82 0 0 chr17 79464525 79464574 -15808077 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 8 1191 3036 142 21 8 chr17 79464574 79465012 -15807639 - RLTR20C LTR ERVK -89 445 3 8 1191 335 154 0 15 chr17 79465066 79465132 -15807519 + GA-rich Low_complexity Low_complexity 2 66 0 8 1191 503 301 7 7 chr17 79465200 79465344 -15807307 - B1F SINE Alu -3 146 3 8 1191 806 242 32 11 chr17 79465941 79466129 -15806522 + B3A SINE B2 3 194 -4 8 1191 491 282 35 7 chr17 79466380 79466523 -15806128 + RMER1C Other Other 1067 1213 -129 8 1191 27 0 0 0 chr17 79466529 79466556 -15806095 + AT_rich Low_complexity Low_complexity 1 27 0 8 1191 22 0 0 0 chr17 79467074 79467096 -15805555 + AT_rich Low_complexity Low_complexity 1 22 0 8 1191 272 270 0 99 chr17 79469788 79469899 -15802752 + B1F SINE Alu 18 117 -32 8 1191 222 37 0 0 chr17 79469976 79470003 -15802648 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 1191 249 33 0 0 chr17 79470328 79470358 -15802293 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 8 1191 642 153 0 0 chr17 79471958 79472069 -15800582 + (TG)n Simple_repeat Simple_repeat 2 112 0 8 1191 390 176 50 0 chr17 79472069 79472188 -15800463 + (TA)n Simple_repeat Simple_repeat 1 125 0 8 1191 375 254 118 8 chr17 79472191 79472310 -15800341 - B1F SINE Alu -8 141 10 8 1191 220 207 68 17 chr17 79472261 79472320 -15800331 - B4A SINE B4 -147 145 84 8 1191 230 286 26 0 chr17 79472401 79472478 -15800173 + B1_Mur1 SINE Alu 70 148 -1 8 1191 486 0 0 0 chr17 79472724 79472778 -15799873 + (TG)n Simple_repeat Simple_repeat 2 55 0 8 1191 328 338 63 50 chr17 79473175 79473539 -15799112 + HAL1 LINE L1 794 1162 -1345 8 1191 282 302 31 0 chr17 79473570 79473666 -15798985 + HAL1 LINE L1 1463 1561 -946 8 1191 576 0 0 0 chr17 79473740 79473804 -15798847 + (CA)n Simple_repeat Simple_repeat 2 65 0 8 1191 202 252 110 25 chr17 79473910 79474028 -15798623 + L2 LINE L2 1376 1503 -1916 8 1191 437 328 45 0 chr17 79474094 79474292 -15798359 - L2 LINE L2 -1277 2142 1936 8 1191 1474 215 221 31 chr17 79474475 79474879 -15797772 + RLTR20B3 LTR ERVK 1 481 -96 8 1191 504 0 0 0 chr17 79474879 79474935 -15797716 + (TG)n Simple_repeat Simple_repeat 2 57 0 8 1191 1474 219 48 36 chr17 79474935 79475029 -15797622 + RLTR20B3 LTR ERVK 482 576 -1 8 1191 336 276 46 0 chr17 79475211 79475298 -15797353 - L2 LINE L2 -1685 1734 1644 8 1191 431 320 83 70 chr17 79475318 79475764 -15796887 - L2 LINE L2 -1919 1500 1049 8 1191 423 299 29 34 chr17 79476129 79476333 -15796318 - LTR16A LTR ERVL 0 451 249 8 1191 514 308 22 0 chr17 79479659 79479844 -15792807 - MER5A DNA MER1_type 0 189 1 8 1191 3973 108 28 5 chr17 79480105 79480711 -15791940 - Lx2 LINE L1 -6 6991 6372 8 1191 570 212 0 25 chr17 79480711 79480832 -15791819 - L1VL2 LINE L1 -5939 396 279 8 1191 21 0 0 0 chr17 79481281 79481302 -15791349 + AT_rich Low_complexity Low_complexity 1 21 0 8 1191 1946 109 28 22 chr17 79481382 79481702 -15790949 - RLTRETN_Mm LTR ERVK 0 322 1 8 1191 7012 71 43 72 chr17 79481756 79482361 -15790290 - L1_Mus4 LINE L1 0 6636 5988 8 1191 444 37 0 0 chr17 79482361 79482415 -15790236 + (TTCTCC)n Simple_repeat Simple_repeat 3 56 0 8 1191 476 76 0 0 chr17 79482415 79482481 -15790170 - B1_Mm SINE Alu -1 146 81 8 1191 284 197 0 57 chr17 79482420 79482490 -15790161 - ID_B1 SINE B4 -6 218 153 8 1191 10848 118 26 35 chr17 79482481 79483857 -15788794 - L1_Mus4 LINE L1 -649 5987 4642 8 1191 222 91 0 0 chr17 79483857 79483890 -15788761 + (TTG)n Simple_repeat Simple_repeat 2 34 0 8 1191 10848 142 18 17 chr17 79483890 79484424 -15788227 - L1_Mus4 LINE L1 -1242 4641 4085 8 1191 882 297 118 49 chr17 79484464 79484871 -15787780 - Lx8 LINE L1 -194 7279 6845 8 1191 21 0 0 0 chr17 79485036 79485057 -15787594 + AT_rich Low_complexity Low_complexity 1 21 0 8 1191 451 266 18 0 chr17 79485351 79485464 -15787187 + Lx7 LINE L1 7160 7274 -422 8 1191 823 80 16 0 chr17 79485589 79485714 -15786937 + (GA)n Simple_repeat Simple_repeat 1 127 0 8 1191 259 152 85 37 chr17 79485717 79485799 -15786852 + Lx8 LINE L1 7360 7445 -28 8 1191 881 194 199 6 chr17 79486340 79486521 -15786130 + B3 SINE B2 1 216 0 8 1191 1554 53 0 1 chr17 79486634 79488163 -15784488 + (TC)n Simple_repeat Simple_repeat 1 1527 0 8 1191 248 332 103 32 chr17 79488167 79488419 -15784232 + L2 LINE L2 2741 3010 -409 8 1191 28 0 0 0 chr17 79489309 79489337 -15783314 + AT_rich Low_complexity Low_complexity 1 28 0 8 1191 890 197 65 15 chr17 79490505 79490706 -15781945 - B3 SINE B2 -5 211 1 8 1191 540 263 116 63 chr17 79490720 79490927 -15781724 - ID_B1 SINE B4 -1 223 6 8 1191 408 341 67 40 chr17 79490932 79491155 -15781496 - MIR SINE MIR -6 256 28 8 1191 725 106 9 0 chr17 79494086 79494199 -15778452 + (TC)n Simple_repeat Simple_repeat 1 114 0 8 1191 245 318 15 22 chr17 79495071 79495206 -15777445 + LTR16D LTR ERVL 511 644 -7 8 1191 3992 241 72 22 chr17 79495223 79495341 -15777310 - Lx9 LINE L1 -6 7638 7496 8 1191 606 28 0 0 chr17 79495341 79495413 -15777238 + (TCTA)n Simple_repeat Simple_repeat 4 75 0 8 1191 3992 241 72 22 chr17 79495413 79495432 -15777219 - Lx9 LINE L1 -149 7495 7478 8 1191 207 0 0 0 chr17 79495432 79495455 -15777196 + (TC)n Simple_repeat Simple_repeat 2 24 0 8 1191 3992 241 72 22 chr17 79495455 79496477 -15776174 - Lx9 LINE L1 -167 7477 6421 8 1191 236 333 51 26 chr17 79496550 79496667 -15775984 + L2a LINE L2 3303 3422 -4 8 1191 426 259 0 192 chr17 79498254 79498338 -15774313 + ID_B1 SINE B4 82 156 -68 8 1191 1215 48 7 0 chr17 79498338 79498484 -15774167 + B1_Mm SINE Alu 1 147 0 8 1191 426 259 0 192 chr17 79498484 79498576 -15774075 + ID_B1 SINE B4 157 224 0 8 1191 2806 125 70 28 chr17 79498660 79499161 -15773490 - RLTR28 LTR ERVL 0 524 3 8 1191 921 278 0 0 chr17 79499656 79499843 -15772808 + B3 SINE B2 3 189 -27 8 1191 699 189 29 29 chr17 79500014 79500150 -15772501 + B1_Mm SINE Alu 9 144 -3 1 1191 1079 33 6 51 chr17 79500150 79500512 -15772139 + (CCAA)n Simple_repeat Simple_repeat 1 345 0 2 1191 276 339 18 0 chr17 79501143 79501255 -15771396 + L2a LINE L2 2143 2256 -1163 3 1191 944 335 72 21 chr17 79501404 79501920 -15770731 + L2a LINE L2 2491 3032 -387 3 1191 492 263 106 71 chr17 79501922 79502102 -15770549 + RLTR42-int LTR ERVK 903 1072 -4450 4 1191 450 0 0 0 chr17 79502102 79502152 -15770499 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1191 492 263 106 71 chr17 79502152 79502225 -15770426 + RLTR42-int LTR ERVK 1073 1164 -4358 4 1191 303 200 15 15 chr17 79502249 79502315 -15770336 + RLTR42-int LTR ERVK 1335 1400 -4122 4 1191 377 141 14 0 chr17 79503162 79503233 -15769418 + (TA)n Simple_repeat Simple_repeat 2 73 0 6 1191 185 301 181 36 chr17 79503934 79504155 -15768496 + L2a LINE L2 3039 3291 -135 3 1191 3498 46 10 0 chr17 79504903 79505295 -15767356 - MTA_Mm LTR MaLR 0 396 1 7 1191 6443 49 29 1 chr17 79505295 79506131 -15766520 - MTA_Mm-int LTR MaLR 0 1098 240 7 1191 5526 125 29 9 chr17 79506141 79507036 -15765615 - MTA_Mm-int LTR MaLR -345 913 1 8 1191 3416 38 8 22 chr17 79507036 79507436 -15765215 - MTA_Mm LTR MaLR -2 394 1 8 1191 733 272 180 34 chr17 79508368 79508897 -15763754 - L1MA4 LINE L1 -278 6022 5417 9 1191 222 116 0 0 chr17 79509489 79509532 -15763119 + (T)n Simple_repeat Simple_repeat 1 43 0 1 1191 1334 27 0 0 chr17 79509532 79509679 -15762972 - B1_Mm SINE Alu 0 147 1 1 1191 282 295 13 0 chr17 79509799 79509877 -15762774 - BC1_Mm scRNA scRNA -59 93 15 1 1191 332 167 14 0 chr17 79509909 79509981 -15762670 + (TA)n Simple_repeat Simple_repeat 1 73 0 1 1191 370 261 151 27 chr17 79510069 79510254 -15762397 - L1ME4a LINE L1 -261 5863 5656 1 1191 477 76 0 0 chr17 79510664 79510730 -15761921 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 1191 230 214 82 41 chr17 79510802 79510875 -15761776 - MIR3 SINE MIR -36 172 97 1 1191 831 302 70 45 chr17 79510893 79511250 -15761401 + MTEa LTR MaLR 1 366 -13 1 1191 870 152 120 0 chr17 79511314 79511472 -15761179 - B2_Mm2 SINE B2 -14 181 5 1 1191 399 299 34 34 chr17 79511937 79512086 -15760565 + MIRb SINE MIR 36 184 -84 1 1191 1153 206 73 9 chr17 79512293 79512577 -15760074 + MTE-int LTR MaLR 1261 1576 -159 2 1191 621 269 88 56 chr17 79512769 79512881 -15759770 - L1MB7 LINE L1 -222 5962 5858 2 1191 186 38 74 37 chr17 79512881 79512935 -15759716 + (TATG)n Simple_repeat Simple_repeat 2 57 0 2 1191 1181 106 0 6 chr17 79512944 79513125 -15759526 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2 1191 1183 89 0 0 chr17 79513135 79513281 -15759370 - B1_Mus2 SINE Alu 0 147 2 2 1191 621 273 119 47 chr17 79513281 79513662 -15758989 - L1MB7 LINE L1 -341 5843 5398 2 1191 378 0 0 0 chr17 79513691 79513733 -15758918 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1191 818 167 0 8 chr17 79513733 79513860 -15758791 - B1_Mur2 SINE Alu -19 130 5 2 1191 908 282 16 59 chr17 79514023 79514328 -15758323 - B4A SINE B4 0 292 1 2 1191 1565 263 24 30 chr17 79514419 79514518 -15758133 + ORR1D2 LTR MaLR 1 97 -273 2 1191 2196 88 12 54 chr17 79514518 79514854 -15757797 - RLTRETN_Mm LTR ERVK 0 322 1 2 1191 1565 263 24 30 chr17 79514854 79515126 -15757525 + ORR1D2 LTR MaLR 98 370 0 2 1191 234 220 0 0 chr17 79515217 79515267 -15757384 - MTE-int LTR MaLR -231 1349 1300 3 1191 1085 96 0 0 chr17 79515292 79515438 -15757213 - B1_Mus1 SINE Alu -1 147 2 3 1191 970 304 45 31 chr17 79515441 79515733 -15756918 - MTE-int LTR MaLR -422 1158 863 3 1191 357 324 80 60 chr17 79515775 79515926 -15756725 - MTE-int LTR MaLR -870 710 557 3 1191 327 78 0 0 chr17 79516145 79516196 -15756455 + (TCG)n Simple_repeat Simple_repeat 1 51 0 3 1191 1206 74 0 0 chr17 79516196 79516358 -15756293 + (TTC)n Simple_repeat Simple_repeat 3 164 0 3 1191 681 264 115 96 chr17 79516358 79516714 -15755937 - MTE-int LTR MaLR -1100 480 118 3 1191 528 74 0 24 chr17 79516755 79516838 -15755813 - L1Md_F2 LINE L1 -1 6581 6501 3 1191 271 336 52 17 chr17 79516841 79516956 -15755695 - MTE-int LTR MaLR -1453 127 9 3 1191 259 298 71 0 chr17 79517149 79517233 -15755418 - ORR1E LTR MaLR -252 107 18 3 1191 1105 299 148 25 chr17 79517289 79517811 -15754840 + Lx9 LINE L1 6269 6854 -619 3 1191 393 197 0 86 chr17 79517997 79518125 -15754526 - Lx8 LINE L1 0 7473 7357 3 1191 915 51 0 0 chr17 79518133 79518250 -15754401 + (TTCC)n Simple_repeat Simple_repeat 4 120 0 3 1191 438 188 101 0 chr17 79518254 79518362 -15754289 - B1_Mur2 SINE Alu -16 133 6 3 1191 1184 242 47 26 chr17 79518409 79518753 -15753898 - Lx8 LINE L1 -153 7320 6970 3 1191 560 234 156 0 chr17 79518963 79519104 -15753547 - Lx8 LINE L1 -954 6519 6357 3 1191 726 262 205 33 chr17 79519201 79519596 -15753055 - LTR37B LTR ERV1 0 468 6 4 1191 765 300 66 0 chr17 79520040 79520267 -15752384 + Lx8 LINE L1 6383 6624 -849 4 1191 1122 239 67 44 chr17 79520269 79520611 -15752040 - ORR1D2 LTR MaLR 0 370 21 4 1191 1313 269 34 12 chr17 79520621 79520945 -15751706 + Lx8 LINE L1 6624 6954 -519 4 1191 1093 269 87 65 chr17 79520950 79521408 -15751243 + RMER13A LTR ERVK 1 468 -392 4 1191 1163 255 75 44 chr17 79521686 79521953 -15750698 + Lx8 LINE L1 6958 7241 -232 4 1191 216 0 0 0 chr17 79521953 79521977 -15750674 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 1191 1163 255 75 44 chr17 79521977 79522098 -15750553 + Lx8 LINE L1 7242 7358 -115 4 1191 1493 209 36 17 chr17 79522112 79522472 -15750179 + Lx9 LINE L1 7121 7487 -157 3 1191 252 87 65 0 chr17 79522504 79522550 -15750101 + Lx9 LINE L1 7595 7643 -1 4 1191 307 268 63 121 chr17 79522600 79522774 -15749877 - RSINE1 SINE B4 0 165 2 4 1191 409 303 18 0 chr17 79522891 79523000 -15749651 - ID_B1 SINE B4 -36 188 78 4 1191 513 115 0 0 chr17 79523239 79523317 -15749334 + (TA)n Simple_repeat Simple_repeat 2 79 0 4 1191 405 345 6 18 chr17 79523335 79523503 -15749148 - L1MEd LINE L1 -5426 693 528 4 1191 347 173 0 26 chr17 79523997 79524074 -15748577 + (TATATG)n Simple_repeat Simple_repeat 2 76 0 5 1191 28 29 0 0 chr17 79524409 79524444 -15748207 + AT_rich Low_complexity Low_complexity 1 35 0 5 1191 264 304 43 0 chr17 79524771 79524863 -15747788 + LTR79 LTR ERVL 432 527 0 5 1191 680 300 69 98 chr17 79525755 79526162 -15746489 - RMER10A LTR ERVL -19 423 29 5 1191 31315 93 23 19 chr17 79526390 79532351 -15740300 + L1_Mus1 LINE L1 584 6567 0 5 1191 1749 174 64 169 chr17 79533076 79533574 -15739077 + RLTR41 LTR ERV1 1 446 0 5 1191 31 0 0 0 chr17 79533970 79534001 -15738650 + AT_rich Low_complexity Low_complexity 1 31 0 5 1191 216 0 0 0 chr17 79534224 79534248 -15738403 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 5 1191 871 255 128 74 chr17 79534268 79534619 -15738032 - ORR1D2 LTR MaLR 0 370 1 5 1191 324 305 159 29 chr17 79534802 79535116 -15737535 - MLT1C LTR MaLR -60 407 53 5 1191 1173 286 88 31 chr17 79536741 79537231 -15735420 + RMER5 LTR ERV1 15 532 -2 6 1191 882 121 18 6 chr17 79537512 79537678 -15734973 + (TATG)n Simple_repeat Simple_repeat 3 170 0 6 1191 913 244 88 35 chr17 79538243 79538528 -15734123 + Lx8 LINE L1 7172 7471 -2 6 1191 24 32 0 0 chr17 79538594 79538625 -15734026 + AT_rich Low_complexity Low_complexity 1 31 0 6 1191 3812 74 21 104 chr17 79539526 79540084 -15732567 + RLTR1B LTR ERV1 1 512 0 6 1191 204 67 0 0 chr17 79540425 79540455 -15732196 + (T)n Simple_repeat Simple_repeat 1 30 0 6 1191 180 229 59 59 chr17 79540581 79540632 -15732019 + MIRb SINE MIR 33 83 -185 6 1191 1660 178 141 35 chr17 79540823 79541191 -15731460 + MTB_Mm LTR MaLR 1 407 0 6 1191 6013 189 62 10 chr17 79541396 79542532 -15730119 - Lx5 LINE L1 -99 6951 5754 6 1191 251 309 71 0 chr17 79542949 79543033 -15729618 - MIR SINE MIR -111 151 62 6 1191 387 286 87 12 chr17 79545907 79546080 -15726571 + L1MC2 LINE L1 6159 6344 0 7 1191 571 292 28 47 chr17 79546430 79546677 -15725974 - MIRb SINE MIR -11 257 9 7 1191 215 350 49 12 chr17 79547905 79547986 -15724665 - L2a LINE L2 0 3426 3343 7 1191 243 250 0 14 chr17 79548025 79548098 -15724553 + GA-rich Low_complexity Low_complexity 1 72 0 7 1191 651 292 44 55 chr17 79548105 79548380 -15724271 - MER44A DNA MER2_type -1 338 67 7 1191 1160 291 57 20 chr17 79548388 79548738 -15723913 - Tigger7 DNA MER2_type -2116 375 13 7 1191 230 122 41 0 chr17 79548738 79548787 -15723864 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 7 1191 582 292 41 91 chr17 79548922 79549157 -15723494 - B4 SINE B4 -12 280 75 7 1191 2098 221 38 30 chr17 79549157 79549657 -15722994 + RLTR16 LTR ERVK 1 504 -1 7 1191 582 292 48 96 chr17 79549657 79549746 -15722905 - B4 SINE B4 -208 84 3 7 1191 341 342 39 7 chr17 79549794 79549947 -15722704 - L2a LINE L2 -339 3087 2930 7 1191 255 277 35 24 chr17 79550238 79550323 -15722328 - MIR3 SINE MIR -15 193 108 7 1191 387 0 0 0 chr17 79550371 79550414 -15722237 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 1191 228 335 41 81 chr17 79550847 79551019 -15721632 - MTC LTR MaLR -202 219 55 8 1191 329 351 13 39 chr17 79550878 79551032 -15721619 - MT2A LTR ERVL -381 152 3 8 1191 513 263 87 53 chr17 79551229 79551548 -15721103 + RLTR15 LTR ERVK 42 343 -16 8 1191 230 298 48 40 chr17 79553110 79553236 -15719415 + Charlie21a DNA MER1_type 562 688 -525 8 1191 429 280 119 4 chr17 79553338 79553589 -15719062 + Charlie21a DNA MER1_type 808 1087 -126 8 1191 582 314 66 121 chr17 79553611 79554067 -15718584 + MER21B LTR ERV1 24 454 -409 8 1191 274 293 76 25 chr17 79554101 79554220 -15718431 + MER77 LTR ERVL 445 569 -38 8 1191 6604 10 0 0 chr17 79554318 79555048 -15717603 + L1Md_T LINE L1 4857 5586 -297 8 1191 9024 32 0 0 chr17 79555048 79556042 -15716609 + L1Md_T LINE L1 5587 6580 -2 8 1191 22 0 0 0 chr17 79556118 79556140 -15716511 + AT_rich Low_complexity Low_complexity 1 22 0 8 1191 506 184 89 67 chr17 79556211 79556391 -15716260 + B2_Mm2 SINE B2 2 185 -10 8 1191 1090 87 0 0 chr17 79556805 79556943 -15715708 + B1_Mus2 SINE Alu 1 138 -9 9 1191 207 0 0 0 chr17 79556943 79556966 -15715685 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 9 1191 281 283 152 55 chr17 79557266 79557483 -15715168 - ORR1E LTR MaLR -53 306 69 9 1191 1065 210 174 15 chr17 79557687 79558026 -15714625 - Lx9 LINE L1 -8 7636 7244 9 1191 450 257 69 40 chr17 79558052 79558072 -15714579 - B2_Mm2 SINE B2 -14 181 163 9 1191 435 106 0 0 chr17 79558072 79558138 -15714513 + (TG)n Simple_repeat Simple_repeat 1 66 0 9 1191 562 247 139 1 chr17 79558138 79558291 -15714360 - B3A SINE B2 -25 173 3 9 1191 350 295 19 0 chr17 79558437 79558542 -15714109 - MTEa LTR MaLR 0 379 273 9 1191 1370 116 4 26 chr17 79558544 79558774 -15713877 - ORR1B2 LTR MaLR -8 359 135 9 1191 886 259 57 0 chr17 79558789 79559017 -15713634 - B4A SINE B4 -47 245 5 9 1191 876 125 0 0 chr17 79559311 79559471 -15713180 + (TG)n Simple_repeat Simple_repeat 2 161 0 9 1191 2200 211 70 13 chr17 79560128 79560574 -15712077 + RLTR20B2 LTR ERVK 4 469 -91 1 1191 279 0 0 0 chr17 79560574 79560605 -15712046 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1191 2200 211 70 13 chr17 79560605 79560685 -15711966 + RLTR20B2 LTR ERVK 470 560 0 1 1192 1228 100 0 11 chr17 79561409 79561591 -15711060 + L1Md_F2 LINE L1 6391 6570 -12 1 1192 2444 148 172 2 chr17 79561947 79562401 -15710250 + MT2A LTR ERVL 3 533 0 1 1192 412 301 48 24 chr17 79562457 79562624 -15710027 + B4A SINE B4 120 290 -2 1 1192 185 154 26 0 chr17 79562750 79562789 -15709862 + GA-rich Low_complexity Low_complexity 3 42 0 1 1192 700 225 142 16 chr17 79562826 79563016 -15709635 - B3 SINE B2 -2 214 1 1 1192 637 254 16 22 chr17 79565286 79565471 -15707180 - MER89 LTR ERV1 0 559 376 1 1192 21 36 0 0 chr17 79565537 79565565 -15707086 + AT_rich Low_complexity Low_complexity 1 28 0 1 1192 24 0 0 0 chr17 79566313 79566337 -15706314 + AT_rich Low_complexity Low_complexity 1 24 0 1 1192 456 192 171 31 chr17 79567301 79567430 -15705221 + B1_Mur1 SINE Alu 3 149 0 1 1192 579 334 58 33 chr17 79567604 79567963 -15704688 - MLT1A LTR MaLR -6 368 1 1 1192 994 245 126 41 chr17 79567989 79568355 -15704296 + MTD LTR MaLR 9 405 -14 1 1192 1216 48 0 0 chr17 79569082 79569228 -15703423 - B1_Mus2 SINE Alu 0 147 2 1 1192 240 302 102 16 chr17 79570311 79570439 -15702212 + MIRb SINE MIR 22 160 -108 1 1192 570 15 0 0 chr17 79571730 79571797 -15700854 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 1192 345 188 0 0 chr17 79572546 79572631 -15700020 + CT-rich Low_complexity Low_complexity 1 85 0 1 1192 580 188 0 0 chr17 79572631 79572732 -15699919 - B1_Mur2 SINE Alu -21 128 28 1 1192 343 287 204 19 chr17 79572762 79572968 -15699683 - L1MEc LINE L1 -4254 2146 1903 1 1192 243 0 0 0 chr17 79572979 79573006 -15699645 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1192 603 269 33 28 chr17 79573006 79573186 -15699465 - B3A SINE B2 -15 183 3 1 1192 259 245 85 0 chr17 79573301 79573395 -15699256 - L1MEc LINE L1 -4589 1826 1725 1 1192 412 120 108 11 chr17 79573408 79573501 -15699150 - Lx2 LINE L1 -1 6996 6895 1 1192 413 167 0 86 chr17 79573603 79573991 -15698660 + (CTGTG)n Simple_repeat Simple_repeat 1 354 0 1 1192 290 243 78 35 chr17 79574090 79574205 -15698446 - L1MEc LINE L1 -4953 1447 1328 1 1192 249 320 100 62 chr17 79574784 79575074 -15697577 - L1MEc LINE L1 -5969 431 131 1 1192 231 321 0 0 chr17 79575077 79575133 -15697518 + polypyrimidine Low_complexity Low_complexity 4 59 0 1 1192 429 235 0 0 chr17 79575141 79575239 -15697412 - ID_B1 SINE B4 -15 209 112 1 1192 195 173 13 39 chr17 79576110 79576188 -15696463 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 1 1192 308 319 61 17 chr17 79576219 79576334 -15696317 - B1_Mus2 SINE Alu 0 147 28 1 1192 183 139 0 0 chr17 79576335 79576371 -15696280 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 1192 3806 266 72 41 chr17 79576447 79577690 -15694961 - Lx8 LINE L1 -2 7471 6191 1 1192 289 271 24 0 chr17 79577974 79578059 -15694592 - MTEa LTR MaLR -7 372 286 1 1192 384 308 24 49 chr17 79578285 79578490 -15694161 + ERVL-E-int LTR ERVL 957 1156 -4511 1 1192 278 257 0 14 chr17 79578555 79578626 -15694025 + GA-rich Low_complexity Low_complexity 1 70 0 1 1192 4101 147 28 18 chr17 79578883 79579568 -15693083 - RLTR17 LTR ERVK 0 692 1 1 1192 238 217 13 80 chr17 79580242 79580317 -15692334 - MTEa LTR MaLR -204 196 127 1 1192 293 82 20 0 chr17 79580590 79580639 -15692012 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1192 245 286 14 14 chr17 79580646 79580717 -15691934 - B4A SINE B4 -20 272 202 1 1192 4161 68 6 4 chr17 79580734 79581263 -15691388 - L1_Mus1 LINE L1 0 6567 6038 1 1192 936 301 0 5 chr17 79581263 79581477 -15691174 - B4A SINE B4 -78 214 2 1 1192 218 236 75 53 chr17 79581535 79581629 -15691022 + L3 LINE CR1 3663 3758 -731 1 1192 289 321 75 6 chr17 79581813 79581973 -15690678 + LTR90A LTR LTR 209 379 -597 1 1192 986 165 8 84 chr17 79582686 79582924 -15689727 + URR1A DNA MER1_type 7 226 0 1 1192 288 0 0 0 chr17 79583032 79583064 -15689587 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1 1192 374 263 74 25 chr17 79583448 79583676 -15688975 - Lx6 LINE L1 -16 7680 7313 1 1192 555 126 0 0 chr17 79583676 79583771 -15688880 + (GAAA)n Simple_repeat Simple_repeat 3 97 0 1 1192 1420 256 14 8 chr17 79583783 79584138 -15688513 - Lx6 LINE L1 -157 7303 6947 1 1192 379 319 0 17 chr17 79584917 79585032 -15687619 - B1F SINE Alu -36 113 1 1 1192 228 86 0 0 chr17 79585044 79585079 -15687572 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1 1192 1088 80 0 0 chr17 79585079 79585217 -15687434 - B1_Mus2 SINE Alu -9 138 1 1 1192 926 226 5 20 chr17 79585243 79585442 -15687209 - B3A SINE B2 0 198 3 1 1192 3280 52 15 0 chr17 79585519 79585921 -15686730 + L1_Mus1 LINE L1 6160 6567 0 1 1192 322 243 14 0 chr17 79587048 79587122 -15685529 + PB1D7 SINE Alu 46 120 0 1 1192 243 316 106 17 chr17 79588372 79588552 -15684099 + L2 LINE L2 2249 2444 -975 1 1192 365 243 0 0 chr17 79589208 79589282 -15683369 + RSINE1 SINE B4 3 76 -89 1 1192 664 253 157 100 chr17 79589301 79589810 -15682841 + RMER4B LTR ERVK 21 558 -27 1 1192 495 0 0 0 chr17 79589823 79589878 -15682773 + (CAAAA)n Simple_repeat Simple_repeat 3 57 0 1 1192 239 302 94 65 chr17 79589887 79590057 -15682594 - RLTR42 LTR ERVK -2 237 63 1 1192 314 234 16 0 chr17 79590154 79590218 -15682433 + RSINE1 SINE B4 70 134 -31 1 1192 684 230 40 0 chr17 79590316 79590468 -15682183 - RSINE1 SINE B4 -4 161 4 1 1192 850 292 74 15 chr17 79590773 79591044 -15681607 + B4A SINE B4 6 292 0 1 1192 242 224 43 29 chr17 79591714 79591783 -15680868 - RLTR16 LTR ERVK -2 503 434 1 1192 2173 184 66 15 chr17 79591784 79592253 -15680398 - RLTR16 LTR ERVK -12 493 1 1 1192 1473 249 12 5 chr17 79592285 79592668 -15679983 + Lx5 LINE L1 6137 6743 -717 1 1192 198 71 0 0 chr17 79592668 79592696 -15679955 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1 1192 1882 283 24 33 chr17 79592696 79593323 -15679328 + Lx5 LINE L1 6455 7046 -4 1 1192 35 54 0 0 chr17 79593611 79593667 -15678984 + AT_rich Low_complexity Low_complexity 1 56 0 1 1192 688 300 84 78 chr17 79593852 79594196 -15678455 + MTE2a LTR MaLR 19 364 -15 1 1192 691 257 58 21 chr17 79594352 79594543 -15678108 - B3 SINE B2 -13 203 6 1 1192 426 343 18 6 chr17 79594550 79594717 -15677934 + MER44B DNA MER2_type 100 268 -282 1 1192 21 0 0 0 chr17 79595564 79595585 -15677066 + AT_rich Low_complexity Low_complexity 1 21 0 1 1192 288 0 0 0 chr17 79597482 79597514 -15675137 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1192 180 0 0 0 chr17 79598857 79598877 -15673774 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1192 277 291 0 9 chr17 79600447 79600558 -15672093 + Lx8 LINE L1 7363 7472 -1 1 1192 387 0 0 0 chr17 79600623 79600666 -15671985 + (CTAA)n Simple_repeat Simple_repeat 3 45 0 1 1192 782 194 0 0 chr17 79600671 79600815 -15671836 + B1_Mur2 SINE Alu 1 144 -5 1 1192 366 23 0 0 chr17 79601549 79601592 -15671059 + (GGGTG)n Simple_repeat Simple_repeat 4 46 0 1 1192 238 354 9 0 chr17 79601619 79601702 -15670949 - ID4 SINE ID -64 88 2 1 1192 941 167 70 136 chr17 79601758 79601859 -15670792 - URR1A DNA MER1_type 0 226 147 1 1192 1130 88 0 0 chr17 79601859 79602006 -15670645 - B1_Mus1 SINE Alu 0 148 2 1 1192 941 167 70 136 chr17 79602006 79602146 -15670505 - URR1A DNA MER1_type -80 146 1 1 1192 1455 186 94 12 chr17 79602185 79602527 -15670124 - ORR1D1 LTR MaLR -4 370 1 1 1192 854 183 126 35 chr17 79602907 79602945 -15669706 - B3 SINE B2 0 216 166 1 1192 324 0 0 0 chr17 79602945 79602981 -15669670 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1192 854 183 126 35 chr17 79602981 79603140 -15669511 - B3 SINE B2 -51 165 1 1 1192 284 283 11 21 chr17 79603229 79603323 -15669328 + MLT1N2 LTR MaLR 470 562 0 1 1192 921 63 0 0 chr17 79603521 79603648 -15669003 + B1_Mus2 SINE Alu 21 147 0 1 1192 375 195 0 0 chr17 79603650 79603773 -15668878 + A-rich Low_complexity Low_complexity 1 123 0 1 1192 252 225 0 112 chr17 79603914 79603994 -15668657 + ID4_ SINE ID 4 74 -9 1 1192 24 0 0 0 chr17 79605998 79606022 -15666629 + AT_rich Low_complexity Low_complexity 1 24 0 1 1192 757 234 89 30 chr17 79606025 79606228 -15666423 - B3 SINE B2 0 216 2 1 1192 229 358 206 9 chr17 79607041 79607264 -15665387 - LTR16A LTR ERVL -155 296 30 1 1192 351 227 36 50 chr17 79607774 79607913 -15664738 - Lx8 LINE L1 -3 7470 7334 1 1192 375 201 7 35 chr17 79607917 79607931 -15664720 + polypyrimidine Low_complexity Low_complexity 131 143 0 1 1192 1005 158 0 0 chr17 79607931 79608108 -15664543 + CT-rich Low_complexity Low_complexity 4 180 0 1 1192 375 201 7 35 chr17 79608108 79608125 -15664526 + polypyrimidine Low_complexity Low_complexity 114 130 0 1 1192 1368 67 0 0 chr17 79608125 79608305 -15664346 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 1192 375 201 7 35 chr17 79608305 79608353 -15664298 + polypyrimidine Low_complexity Low_complexity 67 113 0 1 1192 1200 111 0 0 chr17 79608353 79608533 -15664118 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 1192 375 201 7 35 chr17 79608533 79608595 -15664056 + polypyrimidine Low_complexity Low_complexity 6 66 0 1 1192 1773 259 32 36 chr17 79608635 79609164 -15663487 - Lx8 LINE L1 -115 7358 6832 1 1192 552 306 42 102 chr17 79609259 79609594 -15663057 + ORR1E LTR MaLR 1 315 -44 1 1192 621 323 80 31 chr17 79609817 79610421 -15662230 + L1M5 LINE L1 2534 3166 -2980 1 1192 300 289 117 0 chr17 79610437 79610565 -15662086 + L1M5 LINE L1 5538 5680 -764 1 1192 26 30 0 0 chr17 79610565 79610598 -15662053 + AT_rich Low_complexity Low_complexity 1 33 0 1 1192 1415 39 6 0 chr17 79611655 79611833 -15660818 + (TTCTCC)n Simple_repeat Simple_repeat 1 179 0 1 1192 856 172 6 6 chr17 79611835 79612010 -15660641 + C-rich Low_complexity Low_complexity 4 178 0 1 1192 461 19 0 0 chr17 79612010 79612063 -15660588 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 1192 276 30 0 0 chr17 79612063 79612096 -15660555 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1192 310 264 0 172 chr17 79613087 79613279 -15659372 - MLT1A1 LTR MaLR -215 193 35 1 1192 1057 131 174 25 chr17 79613519 79613715 -15658936 + URR1B DNA MER1_type 1 225 0 1 1192 432 0 0 0 chr17 79614135 79614183 -15658468 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1192 495 0 0 0 chr17 79615136 79615191 -15657460 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 1192 564 233 75 0 chr17 79615191 79615324 -15657327 - B3A SINE B2 -54 144 2 2 1192 589 277 20 7 chr17 79615367 79615516 -15657135 - RSINE1 SINE B4 0 165 15 2 1192 1522 41 5 0 chr17 79616002 79616199 -15656452 + IAPLTR2b LTR ERVK 1 198 -129 2 1192 1478 189 52 10 chr17 79616212 79616522 -15656129 - ORR1D1 LTR MaLR -51 323 1 2 1192 297 0 0 0 chr17 79617119 79617152 -15655499 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1192 722 240 39 0 chr17 79617168 79617322 -15655329 - B3A SINE B2 -38 160 1 2 1192 261 0 0 0 chr17 79617545 79617574 -15655077 + (TTTTG)n Simple_repeat Simple_repeat 5 33 0 2 1192 4206 17 0 0 chr17 79617574 79618055 -15654596 + L1_Mm LINE L1 4183 4663 -1220 2 1192 710 89 2 142 chr17 79618055 79618224 -15654427 + IAPLTR2b LTR ERVK 182 337 0 2 1192 306 349 35 40 chr17 79618798 79619025 -15653626 - L1ME1 LINE L1 -10 6169 5944 2 1192 507 290 60 33 chr17 79619070 79619220 -15653431 - RSINE1 SINE B4 -8 157 4 2 1192 267 232 69 35 chr17 79619221 79619337 -15653314 - L1ME2 LINE L1 -194 5970 5851 2 1192 7094 175 87 16 chr17 79619365 79620289 -15652362 - Lx5 LINE L1 -11 7039 6029 2 1192 180 0 0 0 chr17 79620289 79620309 -15652342 + (TC)n Simple_repeat Simple_repeat 1 20 0 2 1192 7094 150 40 34 chr17 79620309 79620910 -15651741 - Lx5 LINE L1 -1022 6028 5408 2 1192 394 284 50 36 chr17 79620910 79621049 -15651602 - B1F SINE Alu -8 141 1 2 1192 460 247 87 16 chr17 79621052 79621237 -15651414 - L1ME2 LINE L1 -354 5810 5613 2 1192 606 28 0 0 chr17 79621240 79621312 -15651339 + (CA)n Simple_repeat Simple_repeat 2 73 0 2 1192 224 170 19 0 chr17 79621313 79621366 -15651285 + (TA)n Simple_repeat Simple_repeat 1 54 0 2 1192 1224 257 32 15 chr17 79621482 79621822 -15650829 - L1_Mur3 LINE L1 -1983 3897 3552 2 1192 753 12 0 0 chr17 79622264 79622350 -15650301 + (GAAA)n Simple_repeat Simple_repeat 3 88 0 2 1192 7504 65 1 3 chr17 79622544 79623496 -15649155 - L1Md_F2 LINE L1 -495 5388 4439 2 1192 1895 45 0 0 chr17 79623472 79623693 -15648958 + L1Md_F2 LINE L1 5365 5585 -298 2 1192 8352 41 2 1 chr17 79623694 79624684 -15647967 + L1Md_F2 LINE L1 5587 6577 -5 2 1192 185 0 40 0 chr17 79624931 79624956 -15647695 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 1192 333 0 0 0 chr17 79625074 79625111 -15647540 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1192 266 299 13 51 chr17 79625574 79625745 -15646906 + MIR3 SINE MIR 22 180 -28 2 1192 807 11 0 0 chr17 79626195 79626287 -15646364 + (CA)n Simple_repeat Simple_repeat 2 93 0 2 1192 295 310 67 33 chr17 79627719 79627839 -15644812 + MLT1J LTR MaLR 30 153 -359 2 1192 876 122 18 24 chr17 79627885 79628053 -15644598 + CT-rich Low_complexity Low_complexity 3 169 0 2 1192 980 155 14 0 chr17 79628071 79628293 -15644358 + CT-rich Low_complexity Low_complexity 1 225 0 2 1192 1989 170 17 9 chr17 79628293 79628643 -15644008 - Lx4A LINE L1 -1 7057 6705 2 1192 300 269 12 47 chr17 79629009 79629110 -15643541 + L2a LINE L2 3266 3420 -6 2 1192 34 24 0 0 chr17 79629231 79629272 -15643379 + AT_rich Low_complexity Low_complexity 1 41 0 2 1192 217 276 28 66 chr17 79630814 79630952 -15641699 - MER5B DNA MER1_type -49 140 12 2 1192 651 26 0 0 chr17 79631535 79631612 -15641039 + (TG)n Simple_repeat Simple_repeat 1 77 0 2 1192 601 296 26 0 chr17 79631616 79631768 -15640883 - B3A SINE B2 -42 156 1 2 1192 1048 169 92 0 chr17 79632161 79632368 -15640283 - URR1A DNA MER1_type 0 226 1 2 1192 1347 328 29 10 chr17 79633268 79633850 -15638801 + L1MA6 LINE L1 5321 5913 -387 2 1192 1338 95 0 0 chr17 79633850 79634213 -15638438 + (TTTC)n Simple_repeat Simple_repeat 1 363 0 2 1192 450 127 0 0 chr17 79634219 79634290 -15638361 + (TTCC)n Simple_repeat Simple_repeat 3 73 0 2 1192 924 94 71 21 chr17 79634292 79634433 -15638218 - B1_Mus1 SINE Alu 0 148 1 2 1192 305 299 59 70 chr17 79634910 79635097 -15637554 + MLT1F LTR MaLR 344 656 -24 2 1192 256 221 84 42 chr17 79635339 79635410 -15637241 + ID2 SINE ID 5 78 -5 2 1192 254 167 14 43 chr17 79636041 79636110 -15636541 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 1192 561 179 38 6 chr17 79636114 79636271 -15636380 + GA-rich Low_complexity Low_complexity 3 164 0 2 1192 988 92 6 33 chr17 79636274 79636454 -15636197 + (GGGAGA)n Simple_repeat Simple_repeat 3 177 0 2 1192 612 261 129 9 chr17 79636480 79636697 -15635954 - B4A SINE B4 -49 243 1 2 1192 186 118 58 19 chr17 79636804 79636856 -15635795 + CT-rich Low_complexity Low_complexity 2 55 0 2 1192 243 293 12 0 chr17 79637224 79637306 -15635345 - ID4 SINE ID 0 83 1 2 1192 252 301 36 0 chr17 79637524 79637607 -15635044 + PB1D10 SINE Alu 1 86 -31 2 1192 387 0 0 0 chr17 79637908 79637951 -15634700 + (TC)n Simple_repeat Simple_repeat 2 44 0 2 1192 441 0 0 0 chr17 79637951 79637999 -15634652 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 1192 531 0 0 0 chr17 79637999 79638057 -15634594 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1192 699 174 0 0 chr17 79638112 79638221 -15634430 - B3 SINE B2 -104 112 4 2 1192 21 57 0 0 chr17 79638255 79638290 -15634361 + AT_rich Low_complexity Low_complexity 1 35 0 2 1192 1512 237 37 86 chr17 79638445 79638935 -15633716 + RMER19C LTR ERVK 146 611 0 2 1192 285 350 193 7 chr17 79639190 79639486 -15633165 + L3 LINE CR1 4116 4466 -23 2 1192 6303 77 65 11 chr17 79639682 79639769 -15632882 - Lx3_Mus LINE L1 0 7009 6921 2 1192 228 35 0 0 chr17 79639769 79639798 -15632853 + (CACCC)n Simple_repeat Simple_repeat 3 31 0 2 1192 6303 77 65 11 chr17 79639798 79639817 -15632834 - Lx3_Mus LINE L1 -89 6920 6875 2 1192 495 0 0 0 chr17 79639817 79639872 -15632779 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 1192 6303 77 65 11 chr17 79639872 79640684 -15631967 - Lx3_Mus LINE L1 -135 6874 6043 2 1192 819 62 147 8 chr17 79640684 79640706 -15631945 + Lx3_Mus LINE L1 5885 5906 -1103 2 1192 198 0 0 0 chr17 79640706 79640728 -15631923 + (TAA)n Simple_repeat Simple_repeat 2 23 0 2 1192 819 62 147 8 chr17 79640728 79640834 -15631817 + Lx3_Mus LINE L1 5907 6031 -978 2 1192 1261 307 42 9 chr17 79640961 79641389 -15631262 - Lx7 LINE L1 -379 7317 6876 2 1192 281 135 133 13 chr17 79642320 79642395 -15630256 + L1M5 LINE L1 5348 5431 -809 2 1192 348 24 0 0 chr17 79642549 79642590 -15630061 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1192 306 187 107 0 chr17 79643894 79643969 -15628682 - L3 LINE CR1 -1577 2912 2830 2 1192 846 253 33 70 chr17 79644661 79644690 -15627961 + B4 SINE B4 58 85 -207 2 1192 300 53 0 0 chr17 79644690 79644728 -15627923 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 2 1192 846 253 33 70 chr17 79644728 79644858 -15627793 + B4 SINE B4 86 212 -80 2 1192 1832 132 48 16 chr17 79644858 79645174 -15627477 + ORR1A3 LTR MaLR 1 326 0 2 1192 846 253 33 70 chr17 79645174 79645255 -15627396 + B4 SINE B4 213 290 -2 2 1192 951 259 113 30 chr17 79645482 79645859 -15626792 + MTC LTR MaLR 3 404 -17 2 1192 804 289 38 21 chr17 79646503 79646793 -15625858 + LTR82A LTR ERVL 206 500 -372 2 1192 319 300 127 35 chr17 79646787 79646984 -15625667 - MER20 DNA MER1_type -4 215 1 2 1192 1274 34 0 0 chr17 79648446 79648593 -15624058 - B1_Mm SINE Alu 0 147 1 2 1192 539 15 0 14 chr17 79648979 79649048 -15623603 + (TG)n Simple_repeat Simple_repeat 2 69 0 2 1192 1191 206 184 117 chr17 79649390 79649825 -15622826 + MT2A LTR ERVL 1 464 -69 2 1192 331 330 75 53 chr17 79649938 79650312 -15622339 + Kanga1 DNA Tc2 1203 1584 -161 2 1192 266 310 0 0 chr17 79650666 79650737 -15621914 + ID4 SINE ID 2 72 -11 2 1192 400 300 0 0 chr17 79650998 79651108 -15621543 - PB1D10 SINE Alu -6 111 2 2 1192 2748 156 50 31 chr17 79652240 79652757 -15619894 + RLTR11A2 LTR ERVK 1 527 0 2 1192 792 98 0 0 chr17 79652777 79652889 -15619762 - RLTR11A2 LTR ERVK -415 112 1 2 1192 387 60 0 0 chr17 79654128 79654178 -15618473 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 1192 935 236 64 0 chr17 79658360 79658563 -15614088 - B3 SINE B2 0 216 1 2 1192 365 282 58 63 chr17 79659472 79659646 -15613005 + B4A SINE B4 3 175 -117 2 1192 237 265 44 0 chr17 79659728 79659796 -15612855 + (CATATA)n Simple_repeat Simple_repeat 1 71 0 2 1192 891 239 11 5 chr17 79659806 79659995 -15612656 + B3 SINE B2 1 190 -26 2 1192 688 293 91 21 chr17 79660116 79660402 -15612249 + MLT1I LTR MaLR 63 368 -43 2 1192 275 26 51 0 chr17 79660609 79660648 -15612003 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2 1192 1058 87 0 0 chr17 79660648 79660786 -15611865 - B1_Mus1 SINE Alu -10 138 1 2 1192 363 296 29 15 chr17 79661696 79661833 -15610818 - B1_Mur2 SINE Alu -8 141 3 2 1192 384 238 0 0 chr17 79661923 79662049 -15610602 + (TCTA)n Simple_repeat Simple_repeat 4 129 0 2 1192 26 0 0 0 chr17 79662495 79662521 -15610130 + AT_rich Low_complexity Low_complexity 1 26 0 2 1192 1039 288 93 29 chr17 79663223 79663738 -15608913 - L1MB7 LINE L1 -43 6141 5594 2 1192 327 256 0 47 chr17 79663739 79663825 -15608826 - ID4_ SINE ID -1 82 1 2 1192 21 0 0 0 chr17 79663864 79663885 -15608766 + AT_rich Low_complexity Low_complexity 1 21 0 2 1192 1147 82 0 7 chr17 79664170 79664318 -15608333 + B1_Mus1 SINE Alu 1 147 -1 2 1192 302 45 23 0 chr17 79664318 79664362 -15608289 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 2 1192 669 58 0 0 chr17 79664370 79664456 -15608195 + (GAAAA)n Simple_repeat Simple_repeat 2 87 0 2 1192 208 333 9 53 chr17 79665790 79665904 -15606747 - MIR SINE MIR -30 232 124 2 1192 700 357 24 35 chr17 79666053 79666340 -15606311 + B4A SINE B4 2 285 -7 2 1192 758 143 7 0 chr17 79666365 79666512 -15606139 + (CA)n Simple_repeat Simple_repeat 1 148 0 2 1192 182 256 0 0 chr17 79666512 79666551 -15606100 - MIR SINE MIR -83 179 141 2 1192 304 305 42 0 chr17 79666728 79666823 -15605828 + MLT1A0 LTR MaLR 11 109 -265 2 1192 422 333 77 0 chr17 79666842 79667025 -15605626 + MLT1A0 LTR MaLR 141 337 -28 2 1192 220 27 54 0 chr17 79667029 79667066 -15605585 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 2 1192 863 42 0 32 chr17 79667072 79667195 -15605456 - B1_Mm SINE Alu 0 147 29 3 1192 409 301 102 27 chr17 79667351 79667576 -15605075 + MER5C1 DNA MER1_type 18 259 -4 3 1192 198 352 14 0 chr17 79667581 79667652 -15604999 - MIR3 SINE MIR -49 159 88 3 1192 1298 229 214 34 chr17 79670213 79670601 -15602050 + Lx7 LINE L1 6323 6780 -916 3 1192 904 297 25 59 chr17 79670595 79670910 -15601741 + Lx7 LINE L1 7019 7316 -380 3 1192 336 24 0 0 chr17 79670910 79670951 -15601700 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 1192 904 297 25 59 chr17 79670951 79671043 -15601608 + Lx7 LINE L1 7317 7412 -284 3 1192 215 182 30 0 chr17 79671080 79671146 -15601505 + (CAGAGA)n Simple_repeat Simple_repeat 3 70 0 3 1192 349 218 38 112 chr17 79671964 79672124 -15600527 + B1F SINE Alu 1 148 -1 3 1192 209 213 0 0 chr17 79672735 79672782 -15599869 + T-rich Low_complexity Low_complexity 1 47 0 3 1192 435 275 75 0 chr17 79673016 79673176 -15599475 + L2a LINE L2 3206 3377 -49 3 1192 203 328 106 8 chr17 79674068 79674191 -15598460 + MIR3 SINE MIR 3 137 -71 3 1192 527 139 0 10 chr17 79674191 79674293 -15598358 + (TC)n Simple_repeat Simple_repeat 1 101 0 3 1192 234 116 0 0 chr17 79674293 79674336 -15598315 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1192 279 0 0 0 chr17 79674514 79674545 -15598106 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1192 2310 70 3 3 chr17 79676716 79677016 -15595635 + L1_Mus2 LINE L1 6266 6565 -1 3 1192 709 285 123 50 chr17 79677687 79678027 -15594624 - MLT1A0 LTR MaLR 0 365 1 3 1192 279 242 32 42 chr17 79679255 79679350 -15593301 + Charlie15a DNA MER1_type 91 184 -40 3 1192 265 316 0 48 chr17 79679417 79679520 -15593131 + C-rich Low_complexity Low_complexity 1 98 0 3 1192 201 121 0 0 chr17 79679542 79679575 -15593076 + (TCC)n Simple_repeat Simple_repeat 1 33 0 3 1192 22 35 0 0 chr17 79680311 79680340 -15592311 + AT_rich Low_complexity Low_complexity 1 29 0 3 1192 306 301 88 60 chr17 79680343 79680594 -15592057 - L1MC3 LINE L1 -32 7753 7496 3 1192 378 0 0 0 chr17 79680616 79680658 -15591993 + (TC)n Simple_repeat Simple_repeat 2 43 0 3 1192 450 0 0 0 chr17 79680658 79680707 -15591944 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1192 549 225 281 0 chr17 79680885 79681045 -15591606 + B3 SINE B2 2 206 -10 3 1192 240 35 0 0 chr17 79681053 79681082 -15591569 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1192 262 264 18 28 chr17 79681677 79681786 -15590865 + GA-rich Low_complexity Low_complexity 2 109 0 3 1192 267 93 0 0 chr17 79682481 79682524 -15590127 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 1192 208 121 0 0 chr17 79682526 79682559 -15590092 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1192 1148 63 7 0 chr17 79683088 79683231 -15589420 + B1_Mm SINE Alu 2 145 -2 3 1192 180 0 0 0 chr17 79683231 79683251 -15589400 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3 1192 227 79 26 0 chr17 79683257 79683295 -15589356 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 1192 522 139 0 0 chr17 79683340 79683426 -15589225 - ORR1B1 LTR MaLR -3 391 306 3 1192 268 89 304 0 chr17 79683423 79683479 -15589172 - ORR1B1 LTR MaLR -256 73 1 3 1192 957 186 106 19 chr17 79683958 79684166 -15588485 + URR1A DNA MER1_type 1 226 0 3 1192 207 288 0 43 chr17 79684457 79684526 -15588125 - L4 LINE RTE -182 1847 1782 3 1192 765 176 14 7 chr17 79685221 79685364 -15587287 + B1_Mur3 SINE Alu 5 148 -1 3 1192 244 324 135 5 chr17 79685567 79685775 -15586876 - MIR SINE MIR -21 241 7 3 1192 2228 38 0 0 chr17 79685786 79686048 -15586603 + L1Md_T LINE L1 6321 6582 0 3 1192 197 336 134 0 chr17 79686049 79686183 -15586468 - MER5A DNA MER1_type -8 181 30 3 1192 193 303 78 13 chr17 79686346 79686423 -15586228 - MER5B DNA MER1_type -16 162 81 3 1192 243 280 133 0 chr17 79687623 79687698 -15584953 + Tigger16b DNA Tigger 162 246 -91 3 1192 315 113 0 0 chr17 79687910 79687963 -15584688 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 1192 276 30 0 0 chr17 79688014 79688047 -15584604 + (GAA)n Simple_repeat Simple_repeat 3 35 0 3 1192 1413 51 0 0 chr17 79688047 79688225 -15584426 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 3 1192 1453 198 25 9 chr17 79689229 79689546 -15583105 + ORR1D1 LTR MaLR 2 323 -51 3 1192 392 221 79 0 chr17 79689612 79689739 -15582912 - Lx9 LINE L1 -1 7643 7507 3 1192 880 153 14 20 chr17 79690793 79690940 -15581711 + B1_Mur4 SINE Alu 4 149 -1 3 18 2162 225 88 154 chr17 79691232 79692262 -15580389 + L1_Rod LINE L1 4812 5773 -74 3 1193 5224 202 60 32 chr17 79692380 79693499 -15579152 + Lx9 LINE L1 6157 7306 -338 3 1193 2842 153 28 8 chr17 79693517 79694019 -15578632 + RLTR11A LTR ERVK 16 527 -1 3 1193 423 215 48 63 chr17 79694021 79694210 -15578441 - Lx7 LINE L1 -1531 6165 5980 3 1193 275 197 210 96 chr17 79694856 79695013 -15577638 + L1MA5 LINE L1 6051 6225 -75 3 1193 180 200 0 0 chr17 79695071 79695116 -15577535 + (TATG)n Simple_repeat Simple_repeat 3 47 0 3 1193 324 366 0 0 chr17 79697364 79697457 -15575194 + MTEa LTR MaLR 3 95 -264 3 1193 437 183 9 46 chr17 79697524 79697633 -15575018 + MTEa LTR MaLR 249 353 -26 3 1193 1480 106 119 84 chr17 79698025 79698335 -15574316 + ORR1A4 LTR MaLR 1 321 -8 3 1193 223 178 62 8 chr17 79698895 79699025 -15573626 + (TAGA)n Simple_repeat Simple_repeat 1 137 0 3 1193 426 20 0 0 chr17 79699026 79699077 -15573574 + (CATA)n Simple_repeat Simple_repeat 2 52 0 3 1193 340 159 58 12 chr17 79699110 79699282 -15573369 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 3 1193 841 244 86 25 chr17 79699284 79699562 -15573089 + MTEb LTR MaLR 63 357 -22 3 1193 264 247 0 0 chr17 79700770 79700855 -15571796 + (TG)n Simple_repeat Simple_repeat 2 86 0 3 1193 735 302 82 4 chr17 79700870 79701139 -15571512 - B4A SINE B4 -2 290 1 3 1193 2015 58 104 76 chr17 79702218 79702573 -15570078 + RLTR10B2 LTR ERVK 1 365 0 3 1193 338 350 111 19 chr17 79703688 79703895 -15568756 - MLT1H2 LTR MaLR -199 290 65 3 1193 201 94 0 0 chr17 79703902 79703934 -15568717 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 3 1193 279 227 69 113 chr17 79703989 79704148 -15568503 - MIRb SINE MIR -1 261 110 3 1193 240 242 32 0 chr17 79704248 79704310 -15568341 + B4A SINE B4 26 89 -203 3 1193 228 122 0 0 chr17 79704441 79704482 -15568169 + (TC)n Simple_repeat Simple_repeat 1 41 0 3 1193 600 14 0 0 chr17 79705012 79705081 -15567570 + (CA)n Simple_repeat Simple_repeat 1 69 0 3 1193 396 0 0 0 chr17 79705490 79705534 -15567117 + (TC)n Simple_repeat Simple_repeat 1 44 0 3 1193 4028 158 96 86 chr17 79706418 79707311 -15565340 + RMER19B LTR ERVK 1 902 0 3 1193 1819 181 31 6 chr17 79708296 79708646 -15564005 - ORR1B2 LTR MaLR -8 359 1 3 1193 1092 146 113 20 chr17 79709322 79709525 -15563126 - URR1A DNA MER1_type 0 226 5 3 1193 1792 165 73 3 chr17 79709763 79710092 -15562559 + RLTR20A LTR ERVK 190 541 0 3 1193 28 0 0 0 chr17 79710825 79710853 -15561798 + AT_rich Low_complexity Low_complexity 1 28 0 3 1193 4928 179 63 54 chr17 79711183 79713255 -15559396 + MYSERV16_I-int LTR ERVK 1 2840 -2 3 1193 3068 169 19 0 chr17 79713255 79713442 -15559209 + RLTR20A LTR ERVK 1 188 -353 3 1193 1105 95 6 6 chr17 79713442 79713612 -15559039 + (GAA)n Simple_repeat Simple_repeat 1 170 0 3 1193 3068 169 19 0 chr17 79713612 79713862 -15558789 + RLTR20A LTR ERVK 189 439 -102 3 1193 306 0 0 0 chr17 79713862 79713896 -15558755 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1193 3068 169 19 0 chr17 79713896 79713988 -15558663 + RLTR20A LTR ERVK 440 537 -4 3 1193 562 287 70 25 chr17 79714320 79714520 -15558131 + ID_B1 SINE B4 2 210 -14 3 1193 427 174 20 0 chr17 79714587 79714637 -15558014 + polypyrimidine Low_complexity Low_complexity 49 100 0 3 1193 1545 6 0 0 chr17 79714637 79714811 -15557840 + (TTC)n Simple_repeat Simple_repeat 3 176 0 3 1193 427 174 20 0 chr17 79714811 79714858 -15557793 + polypyrimidine Low_complexity Low_complexity 2 48 0 3 1193 216 337 22 33 chr17 79715346 79715438 -15557213 - L2c LINE L2 -28 3359 3269 3 1193 381 43 0 0 chr17 79715889 79715936 -15556715 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1193 459 308 0 25 chr17 79715936 79716096 -15556555 - RSINE1 SINE B4 -8 157 2 3 1193 279 0 0 0 chr17 79717377 79717408 -15555243 + (TC)n Simple_repeat Simple_repeat 1 31 0 3 1193 351 0 0 0 chr17 79717408 79717446 -15555205 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1193 212 303 0 62 chr17 79717487 79717568 -15555083 - ID4_ SINE ID -6 77 2 3 1193 23 0 0 0 chr17 79717572 79717595 -15555056 + AT_rich Low_complexity Low_complexity 1 23 0 3 1193 1229 48 0 0 chr17 79717767 79717913 -15554738 - B1_Mm SINE Alu -1 146 1 3 1193 1235 261 24 9 chr17 79717916 79718245 -15554406 - MTE2b LTR MaLR -27 352 19 3 1193 208 212 30 0 chr17 79718275 79718341 -15554310 + CT-rich Low_complexity Low_complexity 2 69 0 3 1193 1158 105 0 0 chr17 79718347 79718519 -15554132 + (TTC)n Simple_repeat Simple_repeat 3 174 0 3 1193 25 31 0 0 chr17 79718639 79718671 -15553980 + AT_rich Low_complexity Low_complexity 1 32 0 3 1193 457 259 47 56 chr17 79718742 79718955 -15553696 - RLTR15 LTR ERVK -32 327 117 3 1193 597 204 98 41 chr17 79718959 79719153 -15553498 - RLTR15 LTR ERVK -154 205 1 3 1193 432 0 0 0 chr17 79720453 79720501 -15552150 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1193 1302 74 0 0 chr17 79720533 79720708 -15551943 + (TCTA)n Simple_repeat Simple_repeat 3 177 0 3 1193 332 286 59 94 chr17 79720730 79720900 -15551751 - B4 SINE B4 -128 164 1 3 1193 338 292 76 58 chr17 79720900 79721061 -15551590 + MER58A DNA MER1_type 50 213 -11 3 1193 343 245 10 20 chr17 79721637 79721737 -15550914 + MTEb LTR MaLR 279 377 -2 3 1193 1428 314 111 86 chr17 79722176 79723317 -15549334 + FordPrefect DNA Tip100 483 1652 -31 3 1193 381 22 0 0 chr17 79723543 79723589 -15549062 + (TC)n Simple_repeat Simple_repeat 1 46 0 3 1193 297 51 0 0 chr17 79723589 79723627 -15549024 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1193 371 53 0 17 chr17 79724068 79724126 -15548525 + B1_Mur4 SINE Alu 92 148 -2 4 1193 2179 127 64 53 chr17 79724376 79724574 -15548077 - ORR1C1 LTR MaLR 0 378 181 4 1193 890 67 0 7 chr17 79724574 79724710 -15547941 + (GA)n Simple_repeat Simple_repeat 2 136 0 4 1193 2179 127 64 53 chr17 79724710 79724885 -15547766 - ORR1C1 LTR MaLR -198 180 3 4 1193 1980 152 213 11 chr17 79725709 79726080 -15546571 + RLTR41 LTR ERV1 1 446 0 4 1193 773 262 16 10 chr17 79727117 79727310 -15545341 - MLT1B LTR MaLR -2 388 195 4 1193 21 0 0 0 chr17 79727321 79727342 -15545309 + GC_rich Low_complexity Low_complexity 1 21 0 4 1193 338 316 58 71 chr17 79727610 79727835 -15544816 - MLT1D LTR MaLR -259 246 25 4 1193 1173 51 0 6 chr17 79729681 79729838 -15542813 - B2_Mm2 SINE B2 -39 156 1 4 1193 253 194 54 12 chr17 79732676 79732843 -15539808 + CT-rich Low_complexity Low_complexity 1 174 0 4 1193 195 42 0 0 chr17 79733783 79733807 -15538844 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 4 1193 26 50 0 0 chr17 79733838 79733878 -15538773 + AT_rich Low_complexity Low_complexity 1 40 0 4 1193 1389 68 0 11 chr17 79735332 79735511 -15537140 + B2_Mm2 SINE B2 1 177 -18 4 1193 766 252 49 10 chr17 79735600 79735804 -15536847 + B3 SINE B2 1 212 -4 4 1193 272 299 82 0 chr17 79737305 79737402 -15535249 + ID_B1 SINE B4 86 190 -34 4 1193 253 296 28 9 chr17 79737402 79737414 -15535237 + PB1D10 SINE Alu 5 115 -2 4 1193 280 219 41 0 chr17 79738016 79738089 -15534562 + RLTR16 LTR ERVK 430 505 0 4 1193 681 269 0 0 chr17 79740353 79740502 -15532149 - B1F SINE Alu 0 149 1 4 1193 1236 190 46 180 chr17 79740581 79741137 -15531514 + MT2B LTR ERVL 1 601 0 4 1193 38 0 0 0 chr17 79741823 79741861 -15530790 + AT_rich Low_complexity Low_complexity 1 38 0 4 1193 192 315 117 14 chr17 79742192 79742337 -15530314 + L3 LINE CR1 4188 4347 -142 4 1193 312 27 0 0 chr17 79744734 79744771 -15527880 + (CGTG)n Simple_repeat Simple_repeat 2 38 0 4 1193 260 296 0 74 chr17 79745252 79745347 -15527304 + MER58A DNA MER1_type 24 111 -113 4 1193 332 268 72 16 chr17 79745754 79745879 -15526772 + Charlie10 DNA MER1_type 72 203 -2619 4 1193 336 261 117 64 chr17 79747340 79747528 -15525123 + L3 LINE CR1 3694 3891 -598 4 1193 1003 212 259 79 chr17 79747912 79748353 -15524298 - MT2A LTR ERVL -13 520 1 4 1193 305 308 23 6 chr17 79749714 79749825 -15522826 + PB1D10 SINE Alu 2 118 -9 4 1193 412 279 58 46 chr17 79750901 79751074 -15521577 + MIRb SINE MIR 38 212 -50 4 1193 182 351 10 21 chr17 79751043 79751139 -15521512 - MIRc SINE MIR -139 129 35 4 1193 261 336 65 7 chr17 79751240 79751378 -15521273 + MIR SINE MIR 82 227 -35 4 1193 302 98 0 19 chr17 79751791 79751843 -15520808 + (TAA)n Simple_repeat Simple_repeat 1 51 0 4 1193 337 198 10 10 chr17 79753535 79753632 -15519019 + GA-rich Low_complexity Low_complexity 2 98 0 4 1193 199 146 18 18 chr17 79754452 79754508 -15518143 + (CGGGG)n Simple_repeat Simple_repeat 1 56 0 4 1193 25 51 0 0 chr17 79756031 79756070 -15516581 + AT_rich Low_complexity Low_complexity 1 39 0 4 1193 233 295 178 64 chr17 79756985 79757344 -15515307 + L2a LINE L2 3022 3421 -5 4 1193 349 200 66 13 chr17 79757763 79757839 -15514812 - ID4_ SINE ID 0 83 4 4 1193 329 279 113 28 chr17 79758652 79758829 -15513822 + L2a LINE L2 3199 3390 -36 4 1193 180 0 0 0 chr17 79760052 79760072 -15512579 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1193 444 127 63 0 chr17 79760580 79760659 -15511992 - PB1D9 SINE Alu 0 120 37 4 1193 689 264 98 61 chr17 79760960 79761319 -15511332 + MLT1A LTR MaLR 1 372 -2 4 1193 396 0 0 0 chr17 79761760 79761804 -15510847 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1193 502 274 77 45 chr17 79762084 79762395 -15510256 + MLT1B LTR MaLR 1 353 -37 4 1193 199 254 0 45 chr17 79762890 79762956 -15509695 - L3 LINE CR1 -16 4473 4411 4 1193 254 211 0 0 chr17 79762979 79763031 -15509620 + ORR1E LTR MaLR 3 54 -305 4 1193 492 282 24 77 chr17 79763245 79763414 -15509237 + RSINE1 SINE B4 2 161 -4 4 1193 432 0 0 0 chr17 79763749 79763797 -15508854 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1193 666 252 35 26 chr17 79764405 79764633 -15508018 + MER74A LTR ERVL 24 253 -305 4 1193 260 157 0 28 chr17 79764786 79764858 -15507793 + (TCTCTG)n Simple_repeat Simple_repeat 2 71 0 4 1193 10536 105 14 11 chr17 79765127 79766738 -15505913 - L1_Mur1 LINE L1 -1244 4642 3028 4 1193 889 179 76 22 chr17 79766718 79766943 -15505708 - L1_Mur1 LINE L1 -5953 1031 682 4 1193 312 125 0 0 chr17 79766977 79767025 -15505626 + URR1B DNA MER1_type 178 225 0 4 1193 608 227 210 62 chr17 79767026 79767350 -15505301 + L1MC3 LINE L1 6103 6474 -1311 4 1193 459 0 0 0 chr17 79767408 79767459 -15505192 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 1193 1747 292 88 38 chr17 79767461 79768270 -15504381 + L1MC3 LINE L1 6589 7453 -332 4 1193 301 268 113 0 chr17 79768270 79768367 -15504284 + PB1D10 SINE Alu 2 109 -8 4 1193 1747 292 88 38 chr17 79768367 79768540 -15504111 + L1MC3 LINE L1 7454 7620 -165 4 1193 414 226 109 146 chr17 79768548 79768740 -15503911 + B3 SINE B2 2 186 -30 4 1193 511 214 172 20 chr17 79768864 79769227 -15503424 + L1MA5A LINE L1 5473 5910 -390 4 1193 648 273 10 54 chr17 79769697 79769902 -15502749 - B3A SINE B2 -1 197 2 4 1193 1140 199 18 0 chr17 79770050 79770271 -15502380 + URR1B DNA MER1_type 1 225 0 4 1193 185 339 31 0 chr17 79774022 79774087 -15498564 - MIRc SINE MIR -144 124 58 4 1193 441 0 0 0 chr17 79774755 79774804 -15497847 + (GA)n Simple_repeat Simple_repeat 1 49 0 4 1193 303 175 57 19 chr17 79775220 79775325 -15497326 + (TATAA)n Simple_repeat Simple_repeat 1 109 0 4 1193 223 184 79 0 chr17 79775376 79775452 -15497199 + (CATAT)n Simple_repeat Simple_repeat 4 85 0 4 1193 1438 171 80 85 chr17 79775758 79776095 -15496556 - ORR1D1 LTR MaLR 0 374 34 4 1193 2014 131 28 0 chr17 79776095 79776415 -15496236 - ORR1A4 LTR MaLR 0 329 1 4 1193 1438 171 80 85 chr17 79776415 79776453 -15496198 - ORR1D1 LTR MaLR -341 33 1 4 1193 2279 167 82 8 chr17 79776481 79776873 -15495778 - MTC LTR MaLR 0 421 1 4 1193 810 239 12 6 chr17 79777725 79777893 -15494758 + B3 SINE B2 1 169 -47 4 1193 504 0 0 0 chr17 79777899 79777955 -15494696 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 1193 360 0 0 0 chr17 79778245 79778285 -15494366 + (TTA)n Simple_repeat Simple_repeat 3 42 0 4 1193 226 242 104 15 chr17 79778344 79778411 -15494240 - B4 SINE B4 -209 83 11 4 1193 319 295 67 0 chr17 79778436 79778541 -15494110 - B4A SINE B4 -65 227 116 4 1193 1118 245 136 102 chr17 79778546 79779354 -15493297 + MTD-int LTR MaLR 263 1098 0 4 1193 1283 231 113 11 chr17 79779388 79779751 -15492900 + MTD LTR MaLR 6 405 -14 4 1193 192 195 0 0 chr17 79780604 79780645 -15492006 - MIRm SINE MIR -13 263 223 4 1193 3086 64 0 0 chr17 79781121 79781616 -15491035 - L1_Mus1 LINE L1 -610 5957 5463 4 1193 4944 51 0 2 chr17 79781616 79782208 -15490443 + L1_Mus1 LINE L1 5976 6566 -1 4 1193 199 297 102 21 chr17 79782421 79782607 -15490044 - L2 LINE L2 -810 2609 2409 4 1193 347 141 0 15 chr17 79785785 79785850 -15486801 + C-rich Low_complexity Low_complexity 6 69 0 4 1193 236 71 48 0 chr17 79786388 79786430 -15486221 + (TCTCTG)n Simple_repeat Simple_repeat 2 45 0 4 1193 441 0 0 0 chr17 79786435 79786484 -15486167 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1193 24 67 0 0 chr17 79788054 79788099 -15484552 + AT_rich Low_complexity Low_complexity 1 45 0 4 1193 1854 146 65 35 chr17 79788195 79788404 -15484247 - RMER17C LTR ERVK 0 410 194 4 1193 1089 18 23 29 chr17 79788404 79788577 -15484074 + (GAGAA)n Simple_repeat Simple_repeat 5 176 0 4 1193 1854 146 65 35 chr17 79788577 79788765 -15483886 - RMER17C LTR ERVK -217 193 1 4 1193 2328 150 118 59 chr17 79788765 79789393 -15483258 - RMER17C-int LTR ERVK 0 3238 2574 4 1193 1062 189 20 0 chr17 79789405 79789606 -15483045 - RMER17C-int LTR ERVK -879 2359 2155 4 1193 1437 198 27 46 chr17 79790135 79790463 -15482188 - RMER17C-int LTR ERVK -1204 2034 1713 4 1193 678 161 2 5 chr17 79790466 79790600 -15482051 - L1Md_F2 LINE L1 -471 6167 6036 4 1193 27 29 0 0 chr17 79790606 79790640 -15482011 + AT_rich Low_complexity Low_complexity 1 34 0 4 1193 392 296 0 10 chr17 79790642 79790741 -15481910 + PB1D10 SINE Alu 13 110 -7 4 1193 240 296 32 83 chr17 79790802 79791019 -15481632 - L1M4 LINE L1 -1050 5096 4891 4 1193 225 174 0 42 chr17 79791055 79791103 -15481548 + L1MC1 LINE L1 6279 6324 -9 4 1193 195 69 0 0 chr17 79792636 79792665 -15479986 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 4 1193 248 324 150 7 chr17 79793601 79793741 -15478910 - RSINE1 SINE B4 -4 161 2 4 1193 523 306 7 13 chr17 79793785 79793934 -15478717 - B1F1 SINE Alu -1 148 1 4 1193 189 343 70 10 chr17 79794335 79794435 -15478216 + MIR SINE MIR 12 117 -145 4 1193 1019 198 19 19 chr17 79794565 79794781 -15477870 + B3 SINE B2 1 216 0 4 1193 494 303 7 0 chr17 79795000 79795142 -15477509 + RSINE1 SINE B4 3 145 -20 4 1193 1059 90 0 18 chr17 79795192 79795361 -15477290 + (TTC)n Simple_repeat Simple_repeat 1 166 0 4 1193 248 77 26 0 chr17 79795363 79795402 -15477249 + (TCC)n Simple_repeat Simple_repeat 3 42 0 4 1193 369 75 0 0 chr17 79795750 79795803 -15476848 + (ATG)n Simple_repeat Simple_repeat 3 55 0 4 1193 1858 156 31 0 chr17 79796964 79797284 -15475367 - MTC LTR MaLR -8 413 84 4 1193 204 170 0 102 chr17 79797286 79797345 -15475306 + T-rich Low_complexity Low_complexity 5 57 0 4 1193 4033 128 49 15 chr17 79797381 79798050 -15474601 - RLTR17 LTR ERVK 0 692 1 4 1193 391 248 0 34 chr17 79798150 79798267 -15474384 - Lx7 LINE L1 -15 7681 7569 4 1193 380 184 13 13 chr17 79798267 79798344 -15474307 - MTC LTR MaLR -343 78 2 4 1193 462 284 18 94 chr17 79798345 79798516 -15474135 - MTEb LTR MaLR -221 158 1 4 1193 254 276 79 22 chr17 79798517 79798606 -15474045 + MLT1I LTR MaLR 47 140 -271 4 1193 242 194 16 0 chr17 79798833 79798895 -15473756 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1193 294 299 35 50 chr17 79799865 79800018 -15472633 + MIR3 SINE MIR 16 167 -41 5 1193 26280 24 0 0 chr17 79800116 79803852 -15468799 - L1Md_T LINE L1 0 6582 2867 5 1193 38696 44 0 3 chr17 79803854 79810089 -15462562 - L1Md_T LINE L1 0 6585 271 5 1193 1623 250 22 16 chr17 79810373 79811015 -15461636 + RMER1A Other Other 43 562 -468 5 1193 2135 155 14 40 chr17 79811201 79811630 -15461021 - RLTR31A_Mm LTR ERVK -166 418 1 5 1193 1710 181 154 55 chr17 79811634 79812036 -15460615 + RMER1B Other Other 622 1063 -3 5 1193 309 246 0 40 chr17 79812902 79812978 -15459673 - B1_Mur1 SINE Alu -12 137 65 5 1193 522 264 65 145 chr17 79814710 79815096 -15457555 - ORR1E LTR MaLR -4 355 1 5 1193 828 128 0 0 chr17 79815835 79815968 -15456683 + (TCTCCC)n Simple_repeat Simple_repeat 6 138 0 5 1193 579 29 0 0 chr17 79816282 79816351 -15456300 + (CAAAA)n Simple_repeat Simple_repeat 3 71 0 5 1193 294 313 39 39 chr17 79816954 79817107 -15455544 + L1MEc LINE L1 31 183 -6217 5 1193 499 313 113 55 chr17 79817769 79818097 -15454554 - ORR1E LTR MaLR -5 354 8 5 1193 284 322 28 14 chr17 79818535 79818680 -15453971 + L1MEc LINE L1 552 698 -5702 5 1193 554 159 0 8 chr17 79818711 79818838 -15453813 + (TG)n Simple_repeat Simple_repeat 1 126 0 5 1193 1540 201 90 35 chr17 79819145 79819514 -15453137 + MTD LTR MaLR 13 404 -15 5 1193 21 0 0 0 chr17 79820121 79820142 -15452509 + AT_rich Low_complexity Low_complexity 1 21 0 5 1193 855 296 125 16 chr17 79820146 79820262 -15452389 - Lx8 LINE L1 -1 7472 7349 5 1193 647 195 18 0 chr17 79820262 79820375 -15452276 - PB1D9 SINE Alu -5 115 1 5 1193 855 296 125 16 chr17 79820375 79820625 -15452026 - Lx8 LINE L1 -125 7348 7067 5 149 228 67 0 0 chr17 79822826 79822856 -15449795 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1194 249 358 18 0 chr17 79822866 79822975 -15449676 - B4A SINE B4 -18 274 164 5 1194 2485 218 135 9 chr17 79823214 79823859 -15448792 - RMER19A LTR ERVK -11 726 1 5 1194 310 151 14 14 chr17 79823918 79823992 -15448659 + (ATG)n Simple_repeat Simple_repeat 1 74 0 5 1194 794 274 84 30 chr17 79824455 79824653 -15447998 - B4 SINE B4 -12 280 78 5 1194 612 0 0 0 chr17 79824653 79824721 -15447930 + (TTTTG)n Simple_repeat Simple_repeat 4 71 0 5 1194 794 274 84 30 chr17 79824721 79824785 -15447866 - B4 SINE B4 -215 77 5 5 1194 1503 160 11 11 chr17 79825388 79825668 -15446983 - RMER19A LTR ERVK 0 737 363 5 1194 217 200 18 18 chr17 79826107 79826163 -15446488 + CT-rich Low_complexity Low_complexity 2 57 0 5 1194 394 321 0 9 chr17 79826177 79826287 -15446364 - PB1D10 SINE Alu -1 116 8 5 1194 180 381 32 41 chr17 79826440 79826563 -15446088 - MIR SINE MIR -81 181 60 5 1194 191 342 92 0 chr17 79827153 79827273 -15445378 + MIRc SINE MIR 87 217 -51 5 1194 366 23 0 0 chr17 79828102 79828145 -15444506 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1194 667 254 100 24 chr17 79828174 79828384 -15444267 - B4 SINE B4 -66 226 1 5 1194 466 229 13 0 chr17 79830386 79830539 -15442112 + (CA)n Simple_repeat Simple_repeat 1 155 0 5 1194 298 276 0 0 chr17 79830543 79830619 -15442032 + (CATATA)n Simple_repeat Simple_repeat 4 79 0 5 1194 689 156 23 23 chr17 79830619 79830790 -15441861 + (CATA)n Simple_repeat Simple_repeat 4 174 0 5 1194 518 223 6 0 chr17 79830813 79830970 -15441681 + (CA)n Simple_repeat Simple_repeat 2 159 0 5 1194 818 280 60 11 chr17 79832265 79832550 -15440101 - MLT1B LTR MaLR -1 389 91 5 1194 226 252 30 8 chr17 79832600 79832732 -15439919 + (TG)n Simple_repeat Simple_repeat 2 136 0 5 1194 277 243 68 0 chr17 79833022 79833096 -15439555 - MLT1B LTR MaLR -269 121 43 5 1194 1077 214 100 45 chr17 79833464 79833773 -15438878 + Lx2B LINE L1 6673 6998 -2 5 1194 1444 284 15 37 chr17 79834962 79835372 -15437279 + Lx8 LINE L1 6986 7386 -87 5 1194 711 268 36 120 chr17 79835384 79835634 -15437017 + MTE2a LTR MaLR 27 255 -124 5 1194 231 175 206 0 chr17 79835736 79835799 -15436852 + MT2B LTR ERVL 3 78 -523 5 1194 5191 61 7 7 chr17 79835877 79836551 -15436100 - L1Md_F2 LINE L1 -3 6579 5906 5 1194 771 244 109 53 chr17 79836574 79836877 -15435774 + MT2B LTR ERVL 278 597 -4 5 1194 759 11 0 0 chr17 79837178 79837266 -15435385 + (TC)n Simple_repeat Simple_repeat 2 89 0 5 1194 1113 286 80 19 chr17 79837529 79838007 -15434644 + L1MB1 LINE L1 5662 6168 0 5 1194 1955 233 82 36 chr17 79838520 79839418 -15433233 - L1M4 LINE L1 -397 5787 4862 5 1194 262 193 90 67 chr17 79839418 79839507 -15433144 + MLT2C2 LTR ERVL 1 91 -373 5 1194 430 204 35 53 chr17 79839482 79839596 -15433055 - B3 SINE B2 -86 112 1 5 1194 381 296 56 36 chr17 79839628 79839877 -15432774 - L1M4 LINE L1 -2119 4027 3774 5 1194 516 124 0 0 chr17 79840373 79840478 -15432173 + (TCTG)n Simple_repeat Simple_repeat 4 108 0 5 1194 523 247 177 25 chr17 79840481 79840639 -15432012 - B3A SINE B2 -16 182 1 5 1194 183 216 77 19 chr17 79841027 79841079 -15431572 - L3b LINE CR1 -255 227 173 5 1194 247 215 0 15 chr17 79841192 79841258 -15431393 + T-rich Low_complexity Low_complexity 2 66 0 5 1194 2023 190 45 5 chr17 79841601 79842003 -15430648 - MTD LTR MaLR 0 419 2 5 1194 253 286 123 101 chr17 79842716 79842895 -15429756 + B4 SINE B4 108 290 -2 5 1194 32 43 0 0 chr17 79843065 79843111 -15429540 + AT_rich Low_complexity Low_complexity 1 46 0 5 1194 1190 260 108 18 chr17 79843391 79843732 -15428919 - MTEa LTR MaLR -2 377 6 5 1194 2193 41 7 22 chr17 79844835 79845112 -15427539 + L1Md_F3 LINE L1 6311 6583 -1 5 1194 785 286 79 11 chr17 79847042 79847307 -15425344 - B4A SINE B4 -5 287 5 5 1194 1094 76 21 0 chr17 79847381 79847525 -15425126 + B1_Mus2 SINE Alu 1 147 0 5 1194 264 253 80 0 chr17 79847919 79847994 -15424657 + ID4 SINE ID 2 82 -1 5 1194 714 294 145 3 chr17 79848890 79849187 -15423464 - MER2 DNA MER2_type -6 339 1 5 1194 374 261 116 35 chr17 79849189 79849447 -15423204 + HAL1b LINE L1 1710 1988 -21 5 1194 1496 48 4 4 chr17 79849460 79849690 -15422961 + (TAGA)n Simple_repeat Simple_repeat 1 230 0 5 1194 257 256 11 89 chr17 79850128 79850230 -15422421 - BC1_Mm scRNA scRNA -54 98 5 5 1194 558 0 0 0 chr17 79852063 79852125 -15420526 + (TAGA)n Simple_repeat Simple_repeat 1 62 0 5 1194 1131 199 81 76 chr17 79852783 79853180 -15419471 + RMER17C LTR ERVK 9 407 -3 5 1194 261 0 0 0 chr17 79854533 79854562 -15418089 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1194 545 332 19 5 chr17 79855337 79855546 -15417105 + MTEa LTR MaLR 70 281 -98 5 1194 273 119 0 0 chr17 79855564 79855606 -15417045 - MTE2b LTR MaLR -337 42 1 5 1194 212 339 0 0 chr17 79855752 79855814 -15416837 - MIRc SINE MIR -189 79 18 5 1194 309 62 35 59 chr17 79856068 79856153 -15416498 + (TTG)n Simple_repeat Simple_repeat 3 85 0 5 1194 1188 48 7 0 chr17 79856153 79856299 -15416352 - B1_Mm SINE Alu 0 147 1 5 1194 180 111 0 0 chr17 79857377 79857404 -15415247 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 5 1194 294 125 0 0 chr17 79857740 79857788 -15414863 + (TATG)n Simple_repeat Simple_repeat 4 51 0 5 1194 1679 224 62 0 chr17 79857992 79858363 -15414288 + MTD LTR MaLR 15 408 -11 5 1194 591 135 0 0 chr17 79860470 79860566 -15412085 + (TCC)n Simple_repeat Simple_repeat 2 97 0 5 1194 728 212 7 0 chr17 79860882 79861028 -15411623 - B1_Mur2 SINE Alu -1 148 2 5 1194 279 0 0 0 chr17 79861577 79861608 -15411043 + (A)n Simple_repeat Simple_repeat 1 31 0 5 1194 1291 181 0 17 chr17 79862980 79863210 -15409441 - URR1A DNA MER1_type 0 226 1 5 1194 918 163 217 0 chr17 79864340 79864524 -15408127 + URR1A DNA MER1_type 1 224 -2 5 1194 1067 89 7 7 chr17 79864609 79864756 -15407895 + B1_Mus1 SINE Alu 2 148 0 5 1194 885 171 28 148 chr17 79865324 79865620 -15407031 - RLTRETN_Mm LTR ERVK 0 322 44 5 1194 180 0 0 0 chr17 79865620 79865640 -15407011 + (C)n Simple_repeat Simple_repeat 1 20 0 5 1194 885 171 28 148 chr17 79865640 79865700 -15406951 - RLTRETN_Mm LTR ERVK -279 43 9 5 1194 997 229 80 42 chr17 79868263 79868600 -15404051 - ORR1E LTR MaLR -9 350 1 5 1194 648 26 0 0 chr17 79868621 79868699 -15403952 + (TGGA)n Simple_repeat Simple_repeat 4 81 0 5 1194 1349 254 86 2 chr17 79868916 79869322 -15403329 - L1MA5 LINE L1 -6 6294 5855 5 1194 590 254 82 10 chr17 79869316 79869511 -15403140 + L1MA5 LINE L1 5578 5786 -514 5 1194 242 246 69 42 chr17 79870158 79870230 -15402421 - MTE2b LTR MaLR -288 91 18 5 1194 1096 258 87 35 chr17 79870338 79870683 -15401968 + MTD LTR MaLR 18 380 -39 5 1194 236 309 93 29 chr17 79872827 79872967 -15399684 - RMER20B LTR ERVK -2 514 366 5 1194 351 252 98 9 chr17 79873099 79873211 -15399440 - RMER20B LTR ERVK -504 123 2 5 1194 1094 251 81 6 chr17 79873395 79873752 -15398899 - L1MA7 LINE L1 -389 5902 5519 5 1194 932 286 14 17 chr17 79873940 79874213 -15398438 + ORR1D2 LTR MaLR 95 378 -1 5 1194 281 351 44 39 chr17 79875601 79875782 -15396869 - MLT1H LTR MaLR -367 182 1 5 1194 515 347 57 12 chr17 79876543 79876788 -15395863 + MTD LTR MaLR 14 269 -150 5 1194 378 229 36 0 chr17 79876843 79876926 -15395725 + MTD LTR MaLR 267 352 -67 5 1194 1310 130 4 43 chr17 79877293 79877526 -15395125 - URR1B DNA MER1_type 0 225 2 5 1194 23 0 0 0 chr17 79877730 79877753 -15394898 + AT_rich Low_complexity Low_complexity 1 23 0 5 1194 1426 272 162 31 chr17 79878188 79879031 -15393620 - L1M3 LINE L1 -1970 4170 3217 5 1194 1759 152 92 17 chr17 79879064 79879411 -15393240 + ORR1D1 LTR MaLR 2 374 0 5 1194 486 163 151 34 chr17 79879515 79879661 -15392990 - Lx9 LINE L1 -1 7643 7481 5 1194 355 278 114 18 chr17 79879690 79879910 -15392741 - L1M3 LINE L1 -2929 3214 2974 5 1194 230 347 53 18 chr17 79881250 79881420 -15391231 - LTR16B LTR ERVL -5 458 283 5 1194 533 271 67 15 chr17 79883715 79883910 -15388741 + ID_B1 SINE B4 4 208 -16 5 1194 222 145 48 16 chr17 79883960 79884023 -15388628 + GA-rich Low_complexity Low_complexity 3 67 0 5 1194 195 254 189 33 chr17 79885049 79885171 -15387480 + MIRb SINE MIR 72 212 -56 5 1194 2338 60 7 3 chr17 79886795 79887094 -15385557 - L1_Mus3 LINE L1 -1 6637 6338 5 1194 2213 65 0 0 chr17 79887094 79887371 -15385280 + L1_Mus3 LINE L1 6069 6345 -293 5 1194 449 292 108 0 chr17 79887827 79887947 -15384704 + RSINE1 SINE B4 3 135 -30 6 1194 527 324 18 6 chr17 79888245 79888416 -15384235 - MLT1D LTR MaLR -20 485 313 6 1194 11164 31 0 0 chr17 79888998 79890953 -15381698 - L1Md_T LINE L1 0 6582 4628 6 1194 229 265 0 0 chr17 79891588 79891637 -15381014 + (TGGA)n Simple_repeat Simple_repeat 1 49 0 6 1194 295 213 93 0 chr17 79893275 79893350 -15379301 + MTD LTR MaLR 273 354 -65 6 1194 212 167 0 0 chr17 79893655 79893697 -15378954 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 6 1194 1860 128 35 70 chr17 79893705 79894049 -15378602 - Lx2 LINE L1 -1 6996 6665 6 1194 285 333 49 44 chr17 79895125 79895329 -15377322 + U3 snRNA snRNA 11 215 -2 6 1194 468 261 68 83 chr17 79895501 79895730 -15376921 + MTD LTR MaLR 1 247 -172 6 1194 253 175 118 59 chr17 79895764 79895849 -15376802 + MTD LTR MaLR 330 419 0 6 1194 1017 97 0 0 chr17 79898452 79898596 -15374055 - B1_Mur4 SINE Alu -1 149 6 6 1194 958 179 83 15 chr17 79898852 79899056 -15373595 + URR1B DNA MER1_type 6 223 -2 6 1194 586 259 1 14 chr17 79899120 79899286 -15373365 + B3A SINE B2 39 203 -13 6 1194 672 77 0 0 chr17 79899288 79899379 -15373272 + (TG)n Simple_repeat Simple_repeat 2 92 0 6 1194 306 316 59 46 chr17 79899445 79899750 -15372901 + L1ME1 LINE L1 5726 6034 -145 6 1194 291 326 101 7 chr17 79901421 79901569 -15371082 + MLT1F2 LTR MaLR 1 162 -398 6 1194 356 277 0 41 chr17 79901800 79901898 -15370753 + MLT1F2 LTR MaLR 463 556 -4 6 1194 227 356 19 9 chr17 79902120 79902225 -15370426 + MER5A DNA MER1_type 57 162 -27 6 1194 333 335 46 19 chr17 79902840 79903056 -15369595 - L1M5 LINE L1 -368 5756 5535 6 1194 441 117 17 35 chr17 79904132 79904247 -15368404 + (TCTCTG)n Simple_repeat Simple_repeat 2 114 0 6 1194 189 0 0 0 chr17 79904271 79904292 -15368359 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1194 237 184 16 31 chr17 79904298 79904427 -15368224 + (TCTCTG)n Simple_repeat Simple_repeat 4 130 0 6 1194 709 128 16 0 chr17 79904437 79904562 -15368089 + (TTC)n Simple_repeat Simple_repeat 3 129 0 6 1194 309 51 0 0 chr17 79904559 79904598 -15368053 + (TC)n Simple_repeat Simple_repeat 2 40 0 6 1194 27 0 0 0 chr17 79904686 79904713 -15367938 + AT_rich Low_complexity Low_complexity 1 27 0 6 1194 527 242 0 24 chr17 79906416 79906539 -15366112 + Lx8 LINE L1 6760 6879 -594 6 1194 507 350 32 0 chr17 79906552 79906738 -15365913 + Lx8 LINE L1 6930 7121 -352 6 1194 486 49 0 0 chr17 79910194 79910255 -15362396 + (TA)n Simple_repeat Simple_repeat 2 62 0 6 1194 224 294 88 2 chr17 79911202 79911320 -15361331 + MIRb SINE MIR 3 130 -138 6 1194 445 240 51 39 chr17 79911344 79911500 -15361151 + Lx8 LINE L1 7257 7414 -59 6 1194 234 0 0 0 chr17 79912382 79912408 -15360243 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 1194 867 75 15 8 chr17 79912408 79912541 -15360110 + (GGGAGA)n Simple_repeat Simple_repeat 5 139 0 6 1194 184 336 46 69 chr17 79913757 79913888 -15358763 + MIRm SINE MIR 3 130 -146 6 1194 380 316 144 16 chr17 79914271 79914528 -15358123 - B4A SINE B4 -2 290 1 6 1194 1214 148 63 34 chr17 79914797 79915034 -15357617 + MTC LTR MaLR 5 248 -173 6 1194 837 236 5 37 chr17 79915443 79915659 -15356992 - B3 SINE B2 0 216 8 6 1194 27 29 0 0 chr17 79917093 79917127 -15355524 + AT_rich Low_complexity Low_complexity 1 34 0 6 1194 331 104 75 0 chr17 79917134 79917201 -15355450 + (TATATG)n Simple_repeat Simple_repeat 2 73 0 6 1194 191 114 29 0 chr17 79917922 79917957 -15354694 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1194 1620 292 118 57 chr17 79918034 79918917 -15353734 - MTEb-int LTR MaLR -642 938 2 6 1194 272 221 12 38 chr17 79918921 79919001 -15353650 - MTEb LTR MaLR -3 376 299 6 1194 645 254 107 37 chr17 79919075 79919345 -15353306 + B4A SINE B4 2 290 -2 6 1194 1884 160 39 50 chr17 79919948 79920133 -15352518 + ORR1C1 LTR MaLR 2 180 -198 6 1194 1032 96 0 0 chr17 79920133 79920310 -15352341 + (TC)n Simple_repeat Simple_repeat 2 178 0 6 1194 1884 160 39 50 chr17 79920310 79920505 -15352146 + ORR1C1 LTR MaLR 181 378 0 6 1194 447 19 0 0 chr17 79923746 79923798 -15348853 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1194 843 153 14 28 chr17 79923798 79923939 -15348712 - B1_Mur4 SINE Alu -10 140 2 6 1194 440 18 18 0 chr17 79925082 79925139 -15347512 + (TA)n Simple_repeat Simple_repeat 2 59 0 6 1194 522 0 0 0 chr17 79926378 79926436 -15346215 + (TCC)n Simple_repeat Simple_repeat 1 58 0 6 1194 426 39 0 0 chr17 79927512 79927564 -15345087 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 6 1194 517 161 0 67 chr17 79927698 79927878 -15344773 + (TATATG)n Simple_repeat Simple_repeat 6 173 0 6 1194 21 0 0 0 chr17 79927915 79927936 -15344715 + AT_rich Low_complexity Low_complexity 1 21 0 6 1194 435 267 53 92 chr17 79928115 79928321 -15344330 - B3A SINE B2 0 198 1 6 1194 867 90 0 0 chr17 79928680 79928802 -15343849 + (TC)n Simple_repeat Simple_repeat 1 122 0 6 1194 242 317 0 0 chr17 79928806 79928866 -15343785 + polypyrimidine Low_complexity Low_complexity 5 64 0 6 1194 1167 71 13 6 chr17 79929168 79929345 -15343306 - B2_Mm2 SINE B2 -11 205 7 6 1194 1848 160 3 0 chr17 79929465 79929783 -15342868 - ORR1A2 LTR MaLR -8 319 1 6 1194 2743 241 95 80 chr17 79930120 79931008 -15341643 - Lx8 LINE L1 0 7473 6573 6 1194 226 296 48 24 chr17 79931015 79931098 -15341553 - Lx8 LINE L1 -1192 6281 6197 6 1194 345 313 177 30 chr17 79931417 79931649 -15341002 + L2 LINE L2 1642 1925 -1494 6 1194 243 0 0 0 chr17 79931649 79931676 -15340975 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1194 345 313 177 30 chr17 79931676 79931776 -15340875 + L2 LINE L2 1926 2023 -1396 6 1194 305 115 12 37 chr17 79931874 79931955 -15340696 + T-rich Low_complexity Low_complexity 2 80 0 6 1194 189 0 0 0 chr17 79932182 79932203 -15340448 + (CCA)n Simple_repeat Simple_repeat 2 22 0 6 1194 1744 151 39 0 chr17 79932335 79932646 -15340005 - L1_Mus3 LINE L1 -567 5316 4994 6 1194 8260 71 7 1 chr17 79932642 79933955 -15338696 + L1_Mus3 LINE L1 5319 6637 -1 6 1194 804 268 72 22 chr17 79934034 79934310 -15338341 - RLTR16 LTR ERVK -244 324 1 6 1194 364 355 50 25 chr17 79934311 79934551 -15338100 + L2 LINE L2 2308 2553 -866 6 1194 290 350 10 0 chr17 79934647 79934742 -15337909 + B4A SINE B4 1 96 -196 6 1194 664 270 15 14 chr17 79934742 79934944 -15337707 + B3 SINE B2 1 198 0 6 1194 327 244 22 11 chr17 79934986 79935077 -15337574 + B4A SINE B4 133 224 -68 6 1194 889 125 13 0 chr17 79935371 79935523 -15337128 + (TCC)n Simple_repeat Simple_repeat 1 154 0 6 1194 1302 165 9 9 chr17 79937056 79937282 -15335369 + URR1A DNA MER1_type 1 226 0 6 1194 209 0 97 0 chr17 79937942 79937973 -15334678 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 6 1194 1505 17 0 6 chr17 79938523 79938704 -15333947 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 6 1194 810 150 11 23 chr17 79938713 79938890 -15333761 + CT-rich Low_complexity Low_complexity 4 178 0 6 1194 21 0 0 0 chr17 79939900 79939921 -15332730 + AT_rich Low_complexity Low_complexity 1 21 0 6 1194 4060 289 51 32 chr17 79940498 79941971 -15330680 + Lx8 LINE L1 5974 7466 -7 6 1194 2008 58 15 0 chr17 79945610 79945884 -15326767 - ORR1A2 LTR MaLR 0 327 50 6 1194 1291 308 50 22 chr17 79945955 79946419 -15326232 - Lx8 LINE L1 -149 7324 6848 6 1194 914 218 0 50 chr17 79948564 79948762 -15323889 + B3 SINE B2 29 216 0 6 1194 233 0 62 0 chr17 79953124 79953156 -15319495 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 6 1195 189 0 0 0 chr17 79955250 79955271 -15317380 + (TTG)n Simple_repeat Simple_repeat 2 22 0 6 1195 1706 208 62 11 chr17 79955274 79955644 -15317007 + MTD LTR MaLR 10 398 -21 6 1195 181 387 50 0 chr17 79955760 79955879 -15316772 - MIR SINE MIR -17 245 121 6 1195 2070 92 151 0 chr17 79955988 79956378 -15316273 - RLTR47_MM LTR ERV1 -83 449 1 6 1195 1151 78 0 0 chr17 79956538 79956679 -15315972 + B1_Mus1 SINE Alu 2 142 -6 6 1195 794 11 11 0 chr17 79956681 79956776 -15315875 + (GAA)n Simple_repeat Simple_repeat 2 97 0 6 1195 431 287 28 47 chr17 79956785 79956997 -15315654 - MURVY-int LTR ERV1 -109 7343 7136 6 1195 2020 301 61 63 chr17 79957516 79959101 -15313550 - MuRRS4-int LTR ERV1 -2079 5699 2744 6 1195 611 306 69 63 chr17 79959177 79959526 -15313125 - MuRRS4-int LTR ERV1 -5108 2448 2079 6 1195 496 161 152 0 chr17 79959843 79959955 -15312696 - RLTR47_MM LTR ERV1 0 532 404 6 1195 307 263 42 34 chr17 79960361 79960479 -15312172 - MLT1N2 LTR MaLR -12 550 432 6 1195 282 325 12 0 chr17 79960671 79960751 -15311900 + ID4 SINE ID 3 83 0 6 1195 264 350 56 16 chr17 79961117 79961242 -15311409 - MLT1N2 LTR MaLR -355 207 78 6 1195 791 21 0 10 chr17 79961760 79961858 -15310793 + (TTTC)n Simple_repeat Simple_repeat 4 100 0 6 1195 1032 138 6 0 chr17 79961859 79962026 -15310625 - B2_Mm2 SINE B2 -26 169 2 6 1195 420 20 0 0 chr17 79962278 79962327 -15310324 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1195 390 173 0 0 chr17 79962327 79962402 -15310249 + (CATA)n Simple_repeat Simple_repeat 2 76 0 6 1195 189 315 142 0 chr17 79964188 79964262 -15308389 - L2a LINE L2 -3 3423 3334 6 1195 243 0 0 0 chr17 79964262 79964289 -15308362 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1195 189 292 38 75 chr17 79964289 79964373 -15308278 - L2a LINE L2 -93 3333 3232 6 1195 305 82 0 20 chr17 79965318 79965368 -15307283 + (CCCCCT)n Simple_repeat Simple_repeat 1 49 0 6 1195 1336 156 36 5 chr17 79965713 79965932 -15306719 + URR1A DNA MER1_type 1 226 0 6 1195 261 299 130 29 chr17 79966202 79966340 -15306311 + MTEb LTR MaLR 1 152 -207 6 1195 794 237 94 47 chr17 79966598 79966873 -15305778 - RMER21A LTR ERV1 -265 682 395 6 1195 601 174 78 0 chr17 79967031 79967146 -15305505 + MTEb LTR MaLR 256 379 0 6 1195 672 177 0 0 chr17 79967533 79967663 -15304988 - URR1B DNA MER1_type -6 219 90 6 1195 307 254 54 61 chr17 79967663 79967680 -15304971 + CYRA11_Mm Unknown Y-chromosome 177 322 -295 6 1195 207 0 0 0 chr17 79967842 79967865 -15304786 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1195 22 0 0 0 chr17 79968172 79968194 -15304457 + AT_rich Low_complexity Low_complexity 1 22 0 6 1195 932 281 29 4 chr17 79968728 79969007 -15303644 - MTEa LTR MaLR -93 286 1 6 1195 477 192 8 15 chr17 79969173 79969305 -15303346 + CT-rich Low_complexity Low_complexity 2 132 0 6 1195 378 289 54 70 chr17 79969521 79969707 -15302944 - LTR48 LTR ERV1 -604 183 1 6 1195 382 284 34 41 chr17 79970450 79970597 -15302054 - MamRep1161 DNA TcMar -780 177 32 7 1195 385 267 74 60 chr17 79970867 79971082 -15301569 + LTR81B LTR ERV1? 34 251 -1142 7 1195 1124 42 0 46 chr17 79971083 79971234 -15301417 - B1_Mus1 SINE Alu 0 148 5 7 1195 764 106 0 58 chr17 79971466 79971539 -15301112 + (TG)n Simple_repeat Simple_repeat 2 72 0 7 1195 495 0 0 0 chr17 79971539 79971594 -15301057 + (TC)n Simple_repeat Simple_repeat 2 56 0 7 1195 764 118 0 43 chr17 79971594 79971754 -15300897 + (TG)n Simple_repeat Simple_repeat 1 153 0 7 1195 349 212 49 12 chr17 79971754 79971835 -15300816 + RMER1B Other Other 232 315 -751 7 1195 297 250 0 56 chr17 79971833 79971905 -15300746 - RMER1B Other Other -901 165 98 7 1195 237 281 169 36 chr17 79972592 79972758 -15299893 + Charlie10 DNA MER1_type 1585 1772 -1050 7 1195 387 0 0 0 chr17 79973182 79973225 -15299426 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 1195 180 318 90 30 chr17 79974904 79975037 -15297614 - MIRc SINE MIR -32 236 96 7 1195 582 15 0 0 chr17 79976868 79976935 -15295716 + (TA)n Simple_repeat Simple_repeat 1 67 0 7 1195 186 167 0 0 chr17 79977093 79977129 -15295522 + A-rich Low_complexity Low_complexity 1 36 0 7 1195 997 286 107 15 chr17 79977448 79977906 -15294745 + MLT1D LTR MaLR 5 504 -1 7 1195 232 333 91 23 chr17 79977908 79978040 -15294611 + LTR33C LTR ERVL 36 176 -453 7 1195 498 276 92 33 chr17 79978250 79978628 -15294023 - L1M5 LINE L1 -649 5591 5173 7 1195 346 216 0 108 chr17 79978628 79978711 -15293940 + ID4_ SINE ID 2 75 -8 7 1195 328 265 66 77 chr17 79978711 79978778 -15293873 - L1M5 LINE L1 -974 5172 5109 7 1195 429 36 0 0 chr17 79978783 79978838 -15293813 + (TC)n Simple_repeat Simple_repeat 1 55 0 7 1195 365 228 95 6 chr17 79978870 79978968 -15293683 + RMER17C LTR ERVK 95 199 -211 7 1195 519 17 0 0 chr17 79978968 79979028 -15293623 + (TC)n Simple_repeat Simple_repeat 1 60 0 7 1195 365 228 95 6 chr17 79979028 79979097 -15293554 + RMER17C LTR ERVK 200 277 -133 7 1195 304 297 0 0 chr17 79981342 79981416 -15291235 - ID4 SINE ID -8 75 2 7 1195 650 286 85 40 chr17 79981673 79982001 -15290650 + MER34A1 LTR ERV1 237 579 -8 7 1195 257 323 94 24 chr17 79982399 79982526 -15290125 + MIR3 SINE MIR 30 165 -43 7 1195 544 307 39 18 chr17 79982822 79983051 -15289600 + MER57E1 LTR ERV1 1 234 -138 7 1195 2000 109 49 0 chr17 79984119 79984423 -15288228 - ORR1A2 LTR MaLR -8 319 1 7 1195 237 247 48 24 chr17 79985212 79985237 -15287414 - MLT1A LTR MaLR -254 120 94 7 1195 1222 267 55 8 chr17 79985237 79985599 -15287052 - MTE2b LTR MaLR 0 379 1 7 1195 237 247 48 24 chr17 79985599 79985656 -15286995 - MLT1A LTR MaLR -281 93 36 7 1195 586 271 14 7 chr17 79985656 79985797 -15286854 + RSINE1 SINE B4 2 143 -22 7 1195 255 61 0 0 chr17 79985808 79985841 -15286810 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1195 674 262 39 39 chr17 79986379 79986613 -15286038 + RLTR16 LTR ERVK 1 234 -271 7 1195 511 54 14 0 chr17 79986691 79986829 -15285822 - L1Md_F2 LINE L1 0 6582 6499 7 1195 278 26 26 0 chr17 79987082 79987121 -15285530 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 7 1195 6365 59 9 2 chr17 79987161 79987954 -15284697 - L1_Mus1 LINE L1 0 6567 5770 7 1195 610 254 120 49 chr17 79988182 79988610 -15284041 + RMER2 LTR ERV1 1 561 -6 7 1195 726 252 13 104 chr17 79988855 79989085 -15283566 - B4A SINE B4 -82 210 2 7 1195 240 35 0 0 chr17 79991435 79991464 -15281187 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 1195 9601 53 26 19 chr17 79991544 79991899 -15280752 - L1VL4 LINE L1 -1381 2178 1834 7 1195 3722 77 6 8 chr17 79991899 79992395 -15280256 + L1Md_F2 LINE L1 6076 6570 -12 7 1195 9601 73 16 12 chr17 79992395 79994209 -15278442 - L1VL4 LINE L1 -1726 1833 1 7 1195 809 200 36 0 chr17 79996308 79996473 -15276178 + RMER19B LTR ERVK 1 171 -731 7 1195 360 0 0 0 chr17 79996478 79996518 -15276133 + (TATG)n Simple_repeat Simple_repeat 2 41 0 7 1195 291 268 93 0 chr17 79997011 79997108 -15275543 - ORR1E LTR MaLR -253 106 1 7 1195 250 245 162 10 chr17 79998605 79998704 -15273947 - L1MA5 LINE L1 0 6300 6187 7 1195 1524 163 72 10 chr17 79998739 79999030 -15273621 - MTC LTR MaLR -9 412 104 7 1195 1398 105 9 5 chr17 79999051 79999261 -15273390 - Lx2 LINE L1 -12 6985 6775 7 1195 1243 84 167 5 chr17 79999261 79999453 -15273198 - Lx2 LINE L1 -354 6643 6421 7 1195 474 200 11 0 chr17 79999454 79999549 -15273102 - MTC LTR MaLR -325 96 1 7 1195 400 293 69 79 chr17 79999549 79999861 -15272790 - ORR1E LTR MaLR -25 354 1 7 1195 277 333 85 43 chr17 80000686 80000827 -15271824 + MIR SINE MIR 1 147 -115 1 1195 299 254 0 29 chr17 80000830 80000899 -15271752 + ID4_ SINE ID 3 69 -14 2 1195 474 248 64 0 chr17 80001029 80001138 -15271513 + PB1D10 SINE Alu 1 116 -1 3 1195 298 276 113 40 chr17 80001421 80001598 -15271053 - MER90 LTR ERV1 -199 376 187 4 1195 216 0 0 0 chr17 80001764 80001788 -15270863 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1195 1276 252 21 88 chr17 80001788 80002162 -15270489 - MTE2b LTR MaLR -30 349 1 6 1195 187 281 70 0 chr17 80003035 80003092 -15269559 + MER5A DNA MER1_type 6 66 -123 7 1195 2457 41 66 0 chr17 80003282 80003599 -15269052 + ORR1A1 LTR MaLR 1 338 -8 8 1195 573 88 0 0 chr17 80006229 80006309 -15266342 + (TGG)n Simple_repeat Simple_repeat 1 80 0 9 1195 243 0 0 0 chr17 80006850 80006877 -15265774 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 1195 450 0 0 0 chr17 80006877 80006926 -15265725 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 1195 7167 129 56 20 chr17 80006953 80007947 -15264704 - Lx4B LINE L1 -248 6810 5766 1 1195 2653 46 0 0 chr17 80007947 80008249 -15264402 - L1_Mus1 LINE L1 0 6567 6266 1 1195 7167 140 75 15 chr17 80008249 80008822 -15263829 - Lx4B LINE L1 -1293 5765 5141 1 1195 324 306 82 0 chr17 80009064 80009162 -15263489 + MER20 DNA MER1_type 114 219 0 1 1195 23 68 0 0 chr17 80010313 80010357 -15262294 + AT_rich Low_complexity Low_complexity 1 44 0 1 1195 306 167 0 0 chr17 80011467 80011527 -15261124 + (TATG)n Simple_repeat Simple_repeat 4 63 0 1 1195 1074 224 9 0 chr17 80012288 80012502 -15260149 + B3 SINE B2 1 216 0 1 1195 194 0 39 0 chr17 80013003 80013029 -15259622 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1195 1067 38 69 0 chr17 80013029 80013160 -15259491 - B1_Mus2 SINE Alu -7 140 1 1 1195 1524 52 0 0 chr17 80013198 80013371 -15259280 - B2_Mm1a SINE B2 -19 174 2 2 1195 1164 72 0 0 chr17 80013846 80013984 -15258667 + B1_Mus1 SINE Alu 1 138 -10 2 1195 21 57 0 0 chr17 80016414 80016449 -15256202 + AT_rich Low_complexity Low_complexity 1 35 0 2 1195 351 0 0 0 chr17 80016467 80016506 -15256145 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1195 1237 55 7 0 chr17 80016622 80016768 -15255883 - B1_Mus1 SINE Alu 0 148 2 2 1195 362 289 165 0 chr17 80017539 80017563 -15255088 - RSINE1 SINE B4 -1 164 141 2 1195 249 83 0 0 chr17 80017563 80017599 -15255052 + (CG)n Simple_repeat Simple_repeat 2 37 0 2 1195 362 289 165 0 chr17 80017599 80017695 -15254956 - RSINE1 SINE B4 -25 140 25 2 1195 472 325 54 6 chr17 80017972 80018139 -15254512 + L2 LINE L2 1518 1692 -1727 2 1195 441 0 0 0 chr17 80018398 80018447 -15254204 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1195 195 42 0 0 chr17 80018768 80018792 -15253859 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1195 239 242 32 0 chr17 80018792 80018854 -15253797 - L1MEc LINE L1 -4578 1761 1698 3 1195 361 318 101 90 chr17 80019198 80019675 -15252976 - L1MEc LINE L1 -5241 1159 678 3 1195 22 35 0 0 chr17 80020624 80020653 -15251998 + AT_rich Low_complexity Low_complexity 1 29 0 3 1195 292 156 78 0 chr17 80021246 80021336 -15251315 + (TTATA)n Simple_repeat Simple_repeat 4 100 0 3 1195 240 163 0 0 chr17 80021344 80021387 -15251264 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 1195 474 307 29 63 chr17 80021568 80021773 -15250878 + MER3 DNA MER1_type 1 198 -11 3 1195 225 0 0 0 chr17 80023011 80023036 -15249615 + (TAA)n Simple_repeat Simple_repeat 2 26 0 3 1195 239 312 124 23 chr17 80024011 80024188 -15248463 - L1M5 LINE L1 -683 5557 5363 3 1195 311 229 14 28 chr17 80024279 80024351 -15248300 - L2a LINE L2 -17 3409 3339 3 1195 656 241 14 7 chr17 80025015 80025153 -15247498 + RSINE1 SINE B4 4 142 -23 3 1195 21 0 0 0 chr17 80026430 80026451 -15246200 + GC_rich Low_complexity Low_complexity 1 21 0 3 1195 270 81 0 0 chr17 80026751 80026788 -15245863 + (CCCCCA)n Simple_repeat Simple_repeat 2 38 0 4 1195 547 313 41 0 chr17 80028287 80028434 -15244217 - RSINE1 SINE B4 -10 155 3 4 1195 1211 267 74 18 chr17 80028808 80029265 -15243386 - L1MB2 LINE L1 -27 6380 5898 4 1195 1403 294 185 55 chr17 80029317 80030230 -15242421 - Lx8 LINE L1 -12 7461 6430 4 1195 311 277 46 44 chr17 80030258 80030451 -15242200 - L1MB2 LINE L1 -510 5906 5708 4 1195 798 284 41 58 chr17 80030495 80030906 -15241745 - L1MB2 LINE L1 -786 5590 5187 4 1195 346 253 10 50 chr17 80031070 80031170 -15241481 - L1MB2 LINE L1 -1202 5174 5079 4 1195 781 286 51 0 chr17 80031141 80031396 -15241255 - L1M2 LINE L1 -647 5653 5386 4 1195 186 133 0 0 chr17 80031507 80031537 -15241114 + (T)n Simple_repeat Simple_repeat 1 30 0 4 1195 288 0 0 0 chr17 80031537 80031569 -15241082 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1195 827 285 79 22 chr17 80031800 80032169 -15240482 - L1MB2 LINE L1 -1295 5081 4692 4 1195 794 263 124 0 chr17 80032182 80032376 -15240275 + 7SLRNA srpRNA srpRNA 2 219 -95 4 1195 261 263 72 36 chr17 80032413 80032551 -15240100 - L1MB2 LINE L1 -1734 4648 4506 4 1195 237 139 0 0 chr17 80032559 80032602 -15240049 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 1195 570 217 12 6 chr17 80032615 80032782 -15239869 + (TG)n Simple_repeat Simple_repeat 2 169 0 4 1195 2228 263 72 94 chr17 80032800 80033491 -15239160 - L1MB2 LINE L1 -1907 4469 3787 4 1195 596 224 104 7 chr17 80033491 80033626 -15239025 + B1_Mur1 SINE Alu 1 148 -1 4 1195 2228 263 72 94 chr17 80033626 80034317 -15238334 - L1MB2 LINE L1 -2590 3786 3118 4 1195 682 230 105 24 chr17 80034324 80034533 -15238118 + B4A SINE B4 2 227 -65 5 1195 271 262 15 15 chr17 80034535 80034601 -15238050 + RSINE1 SINE B4 5 70 -95 5 1195 734 0 12 0 chr17 80034649 80034735 -15237916 + (CATATA)n Simple_repeat Simple_repeat 6 92 0 5 1195 263 310 0 17 chr17 80034763 80034822 -15237829 + B4 SINE B4 235 292 0 5 1195 252 258 30 0 chr17 80034827 80034893 -15237758 + (CATATA)n Simple_repeat Simple_repeat 1 68 0 5 1195 311 231 51 0 chr17 80034930 80035017 -15237634 - L1MB2 LINE L1 -3264 3115 3025 4 1195 361 279 100 8 chr17 80035068 80035290 -15237361 - L1MB2 LINE L1 -3346 3030 2785 4 1195 211 305 0 0 chr17 80035293 80035352 -15237299 + ID4 SINE ID 3 61 -22 5 1195 475 214 18 0 chr17 80035404 80035516 -15237135 - L1MB2 LINE L1 -3618 2758 2645 4 1195 1947 195 125 10 chr17 80035611 80036129 -15236522 - Lx9 LINE L1 -2 7642 7065 5 1195 1795 167 15 36 chr17 80036128 80036463 -15236188 + Lx9 LINE L1 6744 7071 -573 5 1195 389 263 149 17 chr17 80036463 80036637 -15236014 - L1MB2 LINE L1 -3749 2627 2431 4 1195 241 257 240 19 chr17 80036669 80037149 -15235502 - L1MB2 LINE L1 -4000 2384 1799 4 1195 219 36 0 0 chr17 80037167 80037195 -15235456 + (TTG)n Simple_repeat Simple_repeat 2 29 0 5 1195 526 269 42 55 chr17 80037222 80037387 -15235264 - ID_B1 SINE B4 -59 165 3 5 1195 419 304 77 10 chr17 80037431 80037640 -15235011 - L1MB2 LINE L1 -4636 1748 1526 4 1195 294 29 0 0 chr17 80037702 80037737 -15234914 + (ATTG)n Simple_repeat Simple_repeat 2 36 0 5 1195 447 59 14 0 chr17 80037754 80037819 -15234832 - B2_Mm2 SINE B2 -82 116 46 5 1195 1280 76 6 0 chr17 80037850 80038022 -15234629 - B2_Mm2 SINE B2 -22 173 1 6 1195 726 167 0 0 chr17 80038032 80038164 -15234487 + CT-rich Low_complexity Low_complexity 1 132 0 6 1195 7705 159 48 21 chr17 80038164 80040556 -15232095 - Lx5 LINE L1 0 7050 4586 6 1195 375 298 108 23 chr17 80040547 80040805 -15231846 - L1M4c LINE L1 -4931 1715 1436 6 1195 42185 4 0 0 chr17 80040786 80047368 -15225283 - L1Md_A LINE L1 0 6582 1 6 1195 341 295 163 29 chr17 80047369 80047645 -15225006 - L1M4c LINE L1 -5058 1484 1172 6 1195 540 181 46 34 chr17 80047987 80048148 -15224503 - MTD-int LTR MaLR -1345 164 1 6 1195 1559 194 82 85 chr17 80048152 80048564 -15224087 - MTD LTR MaLR -8 411 1 6 1195 830 308 65 11 chr17 80048600 80048876 -15223775 + B4A SINE B4 1 291 -1 6 1195 189 307 57 101 chr17 80049300 80049616 -15223035 - L2b LINE L2 -272 3103 2762 6 1195 800 151 71 7 chr17 80050147 80050287 -15222364 - B1_Mur3 SINE Alu 0 149 1 6 1195 254 228 25 12 chr17 80050539 80050619 -15222032 + L1MA5 LINE L1 6213 6293 -7 6 1195 263 160 20 0 chr17 80051801 80051851 -15220800 + B1_Mm SINE Alu 97 147 0 7 1195 850 275 85 151 chr17 80052530 80052954 -15219697 + MTD LTR MaLR 9 404 -15 7 1195 1785 199 92 39 chr17 80053336 80053827 -15218824 - RLTR11A2 LTR ERVK -6 521 5 7 1195 3611 201 70 102 chr17 80053831 80054106 -15218545 - MYSERV6-int LTR ERVK 0 8959 8736 7 1195 4436 48 4 13 chr17 80054106 80054630 -15218021 - L1Md_F2 LINE L1 -12 6570 6052 7 1195 3611 201 70 102 chr17 80054630 80055525 -15217126 - MYSERV6-int LTR ERVK -224 8735 7826 7 1195 415 205 37 52 chr17 80055503 80055637 -15217014 - MYSERV6-int LTR ERVK -1060 7899 7768 7 1195 437 269 96 0 chr17 80055642 80055798 -15216853 - RMER4A LTR ERVK -30 436 266 7 1195 233 288 0 0 chr17 80055848 80055907 -15216744 - RMER4B LTR ERVK -151 434 376 7 1195 1761 289 65 59 chr17 80055925 80056750 -15215901 - MYSERV-int LTR ERVK -1529 5021 4192 7 1195 500 258 15 66 chr17 80056892 80057029 -15215622 - B1_Mur3 SINE Alu -2 147 18 7 1195 1072 188 113 48 chr17 80057594 80057885 -15214766 - MYSERV6-int LTR ERVK -2243 6716 6407 7 1195 503 229 7 42 chr17 80057959 80058108 -15214543 - B1_Mur4 SINE Alu -6 141 1 7 1195 430 193 54 54 chr17 80058108 80058256 -15214395 - MYSERV6-int LTR ERVK -3965 4994 4847 7 1195 6108 83 45 5 chr17 80058884 80059692 -15212959 - L1_Mus4 LINE L1 -6 6630 5791 7 1195 2303 111 6 9 chr17 80060385 80060713 -15211938 - ORR1A2 LTR MaLR 0 327 1 8 1195 759 263 77 30 chr17 80062264 80062499 -15210152 - BGLII_A LTR ERVK -195 246 1 8 1195 23 0 0 0 chr17 80062774 80062797 -15209854 + AT_rich Low_complexity Low_complexity 1 23 0 8 1195 351 0 0 0 chr17 80062952 80062991 -15209660 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 1195 378 0 0 0 chr17 80063248 80063290 -15209361 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 1195 22 35 0 0 chr17 80063410 80063439 -15209212 + AT_rich Low_complexity Low_complexity 1 29 0 8 1195 343 252 196 15 chr17 80063797 80063930 -15208721 + L1MC LINE L1 3445 3601 -2545 8 1195 1490 294 109 40 chr17 80063965 80064938 -15207713 + L1MC LINE L1 3701 4740 -1406 8 1195 789 182 193 26 chr17 80066572 80066764 -15205887 - URR1A DNA MER1_type -1 225 2 8 1195 28 29 0 0 chr17 80067526 80067561 -15205090 + AT_rich Low_complexity Low_complexity 1 35 0 8 1195 393 22 0 0 chr17 80067584 80067630 -15205021 + (TG)n Simple_repeat Simple_repeat 1 46 0 8 1195 267 222 11 110 chr17 80067848 80067939 -15204712 - BC1_Mm scRNA scRNA -65 87 6 9 1195 27 29 0 0 chr17 80068249 80068283 -15204368 + AT_rich Low_complexity Low_complexity 1 34 0 9 1195 774 230 64 135 chr17 80068573 80068885 -15203766 - B4A SINE B4 -2 290 1 9 1195 236 216 0 64 chr17 80069203 80069297 -15203354 + T-rich Low_complexity Low_complexity 2 89 0 9 1195 421 282 117 11 chr17 80069462 80069641 -15203010 - Lx8 LINE L1 0 7473 7276 9 1195 1073 107 59 6 chr17 80072058 80072228 -15200423 - B2_Mm2 SINE B2 -9 186 8 9 1195 555 281 102 8 chr17 80072254 80072517 -15200134 - L1MA9 LINE L1 -70 6242 5948 9 1195 23654 44 1 1 chr17 80072874 80076439 -15196212 - L1Md_F2 LINE L1 0 6582 3016 9 1195 242 237 90 26 chr17 80076591 80076669 -15195982 + RLTR25B LTR ERVK 427 509 -519 9 1195 842 73 0 0 chr17 80076599 80076709 -15195942 + B1_Mus1 SINE Alu 36 145 -3 9 1195 225 0 0 0 chr17 80076710 80076735 -15195916 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1 1195 977 250 36 14 chr17 80076743 80077006 -15195645 + B4A SINE B4 1 269 -23 1 1195 342 0 0 0 chr17 80077006 80077044 -15195607 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1195 977 250 36 14 chr17 80077044 80077060 -15195591 + B4A SINE B4 270 285 -7 1 1195 347 256 50 0 chr17 80077068 80077189 -15195462 + (CATA)n Simple_repeat Simple_repeat 4 130 0 1 1195 7224 84 35 12 chr17 80077208 80078410 -15194241 + L1_Mm LINE L1 2560 3858 -56 1 1195 465 42 137 14 chr17 80078410 80078483 -15194168 + L1Md_F3 LINE L1 6500 6581 -3 1 1195 7224 60 14 14 chr17 80078483 80078539 -15194112 + L1_Mm LINE L1 3859 3914 0 1 1195 299 0 38 38 chr17 80080574 80080627 -15192024 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 1195 27 0 0 0 chr17 80081756 80081783 -15190868 + AT_rich Low_complexity Low_complexity 1 27 0 1 1195 437 235 10 0 chr17 80081791 80081893 -15190758 + PB1D10 SINE Alu 10 112 -5 1 1195 405 58 0 0 chr17 80081895 80081947 -15190704 + (ATATG)n Simple_repeat Simple_repeat 3 54 0 1 1195 378 0 0 0 chr17 80082317 80082359 -15190292 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1195 1590 203 198 32 chr17 80082359 80082889 -15189762 + RMER19B LTR ERVK 2 619 -283 1 1195 869 96 0 0 chr17 80082889 80083014 -15189637 + L1_Mus2 LINE L1 6441 6565 -1 1 1195 28 29 0 0 chr17 80083018 80083053 -15189598 + AT_rich Low_complexity Low_complexity 1 35 0 1 1195 712 161 114 85 chr17 80084793 80084969 -15187682 - URR1A DNA MER1_type -44 182 2 1 1196 387 280 49 55 chr17 80085598 80085839 -15186812 - L1MA10 LINE L1 -1 6333 5948 1 1196 235 244 101 34 chr17 80085852 80085971 -15186680 + L1M5 LINE L1 5794 5920 -244 1 1196 344 252 244 0 chr17 80086121 80086313 -15186338 - Lx8 LINE L1 -1022 6451 6213 1 1196 322 279 66 52 chr17 80088433 80088645 -15184006 - L1ME1 LINE L1 -146 6033 5819 1 1196 216 0 0 0 chr17 80088754 80088778 -15183873 + (TTGG)n Simple_repeat Simple_repeat 4 27 0 1 1196 3161 49 24 58 chr17 80090024 80090439 -15182212 - L1_Mus2 LINE L1 -1 6565 6165 1 1196 276 340 101 28 chr17 80090577 80090686 -15181965 - PB1D10 SINE Alu 0 117 1 1 1196 369 0 0 0 chr17 80090769 80090810 -15181841 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1196 248 322 17 126 chr17 80090960 80091191 -15181460 + RMER4B LTR ERVK 8 213 -372 1 1196 927 278 75 12 chr17 80091491 80091746 -15180905 + B4A SINE B4 1 271 -21 1 1196 407 19 0 19 chr17 80091767 80091820 -15180831 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1196 24 0 0 0 chr17 80092504 80092528 -15180123 + AT_rich Low_complexity Low_complexity 1 24 0 1 1196 1003 179 58 29 chr17 80093680 80093887 -15178764 + URR1B DNA MER1_type 13 225 0 1 1196 246 62 0 0 chr17 80096078 80096110 -15176541 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 1 1196 523 289 86 16 chr17 80096111 80096368 -15176283 - L1MC LINE L1 -3320 2826 2552 1 1196 342 67 0 0 chr17 80096368 80096413 -15176238 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 1196 279 0 0 0 chr17 80096413 80096443 -15176208 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 1196 309 294 187 20 chr17 80096601 80096799 -15175852 - L1MC LINE L1 -3654 2492 2262 1 1196 816 193 44 0 chr17 80096815 80096950 -15175701 + B1_Mur2 SINE Alu 2 142 -7 1 1196 374 206 14 0 chr17 80097663 80097736 -15174915 + B1F SINE Alu 10 83 -66 1 1196 252 258 48 0 chr17 80098559 80098621 -15174030 - MLT1L LTR MaLR -545 65 1 1 1196 226 164 18 18 chr17 80098901 80098957 -15173694 + CT-rich Low_complexity Low_complexity 2 57 0 1 1196 898 75 3 15 chr17 80098972 80099121 -15173530 - B1_Mus1 SINE Alu -9 141 1 1 1196 427 193 48 95 chr17 80099008 80099134 -15173517 - MT2B LTR ERVL -337 264 145 1 1196 258 254 0 37 chr17 80099013 80099148 -15173503 - ORR1B1-int LTR MaLR -755 754 625 1 1196 237 246 164 60 chr17 80099609 80099743 -15172908 - L1MA7 LINE L1 -222 6078 5931 1 1196 248 255 200 13 chr17 80099732 80099887 -15172764 + L1MA7 LINE L1 6103 6286 -5 1 1196 1574 246 12 3 chr17 80100464 80100798 -15171853 - MER58B DNA MER1_type -4 337 1 1 1196 357 307 23 38 chr17 80102435 80102567 -15170084 - ID_B1 SINE B4 -1 223 94 1 1196 252 190 25 12 chr17 80103018 80103098 -15169553 + (CA)n Simple_repeat Simple_repeat 1 81 0 1 1196 222 91 0 0 chr17 80103348 80103381 -15169270 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1196 282 106 0 0 chr17 80103692 80103739 -15168912 + (TTTG)n Simple_repeat Simple_repeat 1 47 0 1 1196 892 96 21 43 chr17 80103739 80103880 -15168771 - B1_Mus1 SINE Alu -1 147 10 1 1196 444 221 45 123 chr17 80103747 80103902 -15168749 - B4A SINE B4 -68 224 82 1 1196 418 282 54 16 chr17 80103903 80104087 -15168564 - L1MD1 LINE L1 -358 5884 5694 1 1196 267 31 0 0 chr17 80104231 80104263 -15168388 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1 1196 990 234 80 4 chr17 80104714 80104976 -15167675 - B4A SINE B4 -10 282 1 1 1196 567 78 0 0 chr17 80110051 80110128 -15162523 + (GA)n Simple_repeat Simple_repeat 2 78 0 1 1196 545 252 114 20 chr17 80110384 80110586 -15162065 + ORSL DNA Tip100 55 275 0 1 1196 989 111 235 32 chr17 80111543 80111730 -15160921 - URR1B DNA MER1_type 0 225 1 1 1196 347 113 14 0 chr17 80112253 80112324 -15160327 + (TTTG)n Simple_repeat Simple_repeat 4 75 0 1 1196 223 248 125 58 chr17 80115734 80115854 -15156797 - MIRc SINE MIR -109 159 32 1 1196 197 83 28 0 chr17 80115907 80115943 -15156708 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 1 1196 267 325 0 93 chr17 80116488 80116617 -15156034 - MLT1A1 LTR MaLR 0 408 292 1 1196 280 312 65 70 chr17 80117233 80117264 -15155387 + B4 SINE B4 57 168 -124 1 1196 510 239 51 51 chr17 80117264 80117401 -15155250 + B1_Mur4 SINE Alu 1 137 -13 1 1196 280 312 65 70 chr17 80117401 80117419 -15155232 + B4 SINE B4 169 241 -51 1 1196 380 224 0 10 chr17 80117617 80117716 -15154935 + CT-rich Low_complexity Low_complexity 1 98 0 1 1196 273 227 78 26 chr17 80118665 80118742 -15153909 - Kanga1a DNA Tc2 -662 92 12 1 1196 338 324 21 74 chr17 80118897 80119087 -15153564 - ORR1E LTR MaLR -123 236 57 1 1196 851 264 48 20 chr17 80119154 80119405 -15153246 - MTE-int LTR MaLR -40 1540 1283 1 1196 424 133 0 0 chr17 80119776 80119836 -15152815 + (TCCC)n Simple_repeat Simple_repeat 2 61 0 1 1196 538 90 22 11 chr17 80119836 80119926 -15152725 + (TTTC)n Simple_repeat Simple_repeat 3 93 0 1 1196 296 326 68 57 chr17 80120808 80121000 -15151651 - L3 LINE CR1 -310 4179 3986 1 1196 1998 252 158 11 chr17 80121357 80121456 -15151195 - Lx8 LINE L1 -6 7467 7368 1 1196 576 42 0 0 chr17 80121456 80121527 -15151124 + (TC)n Simple_repeat Simple_repeat 1 71 0 1 1196 1998 252 158 11 chr17 80121527 80122046 -15150605 - Lx8 LINE L1 -106 7367 6758 1 1196 314 237 0 0 chr17 80122290 80122349 -15150302 - B3 SINE B2 -79 137 79 1 1196 1162 88 0 0 chr17 80123010 80123158 -15149493 + B1_Mus1 SINE Alu 1 148 0 1 1196 245 91 0 43 chr17 80123158 80123204 -15149447 + (CAAAAA)n Simple_repeat Simple_repeat 5 48 0 1 1196 272 285 164 28 chr17 80123391 80123568 -15149083 + MIRb SINE MIR 31 231 -37 1 1196 324 311 108 63 chr17 80125471 80125629 -15147022 - MLT1A1 LTR MaLR -243 165 1 1 1196 1356 256 147 11 chr17 80126196 80126651 -15146000 - Charlie1b DNA MER1_type -6 517 1 1 1196 460 339 47 47 chr17 80127073 80127327 -15145324 - MIRb SINE MIR -2 266 13 1 1196 233 338 132 0 chr17 80128685 80128821 -15143830 + MIR3 SINE MIR 38 191 -17 1 1196 990 161 96 19 chr17 80129828 80130037 -15142614 - URR1A DNA MER1_type -1 225 1 1 1196 23 0 0 0 chr17 80131052 80131075 -15141576 + AT_rich Low_complexity Low_complexity 1 23 0 1 1196 299 333 32 58 chr17 80132626 80132782 -15139869 - MIRb SINE MIR -14 254 103 1 1196 5404 22 21 3 chr17 80134372 80135003 -15137648 - L1Md_F3 LINE L1 -1 6583 5942 1 1196 366 58 420 0 chr17 80135003 80135072 -15137579 + L1_Mm LINE L1 5292 5389 -494 1 1196 194 0 39 0 chr17 80135235 80135261 -15137390 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1196 1229 41 7 0 chr17 80135261 80135406 -15137245 - B1_Mm SINE Alu -1 146 1 1 1196 21 0 0 0 chr17 80135551 80135572 -15137079 + AT_rich Low_complexity Low_complexity 1 21 0 1 1196 566 206 20 13 chr17 80135783 80135929 -15136722 + B3A SINE B2 4 172 -21 1 1196 270 0 0 0 chr17 80136346 80136376 -15136275 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 1 1196 450 0 0 0 chr17 80137353 80137403 -15135248 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1196 459 0 0 0 chr17 80137407 80137458 -15135193 + (GA)n Simple_repeat Simple_repeat 1 51 0 1 1196 251 344 160 0 chr17 80137799 80137924 -15134727 + MIR3 SINE MIR 53 197 -11 1 1196 314 294 76 45 chr17 80138767 80138899 -15133752 - LTR48 LTR ERV1 -630 157 22 1 1196 259 274 218 87 chr17 80138903 80138964 -15133687 + MT2A LTR ERVL 1 88 -445 1 1196 432 0 0 0 chr17 80138964 80139012 -15133639 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1196 348 274 326 87 chr17 80139012 80139160 -15133491 + MT2A LTR ERVL 89 260 -294 1 1196 216 0 0 0 chr17 80139160 80139184 -15133467 + (CTG)n Simple_repeat Simple_repeat 3 26 0 1 1196 490 289 121 29 chr17 80139184 80139433 -15133218 + MT2A LTR ERVL 261 601 0 1 1196 185 302 56 44 chr17 80139846 80139936 -15132715 + MIR SINE MIR 54 144 -118 1 1196 333 317 73 0 chr17 80140389 80140512 -15132139 - MLT1L LTR MaLR -293 317 186 1 1196 209 238 0 0 chr17 80140943 80140985 -15131666 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 1196 209 260 0 20 chr17 80141153 80141204 -15131447 + GA-rich Low_complexity Low_complexity 3 52 0 1 1196 403 271 0 94 chr17 80141724 80141816 -15130835 + RSINE1 SINE B4 2 85 -80 1 1196 651 67 0 0 chr17 80141816 80141905 -15130746 + (CA)n Simple_repeat Simple_repeat 2 90 0 1 1196 403 271 0 94 chr17 80141905 80141918 -15130733 + RSINE1 SINE B4 86 97 -68 1 1196 201 129 0 0 chr17 80141918 80141949 -15130702 + (GGAA)n Simple_repeat Simple_repeat 2 32 0 1 1196 360 0 0 0 chr17 80142768 80142808 -15129843 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1196 504 0 0 0 chr17 80142808 80142863 -15129788 + (GA)n Simple_repeat Simple_repeat 2 57 0 2 1196 1678 227 73 10 chr17 80143470 80143853 -15128798 - MTD LTR MaLR 0 419 13 2 1196 23 0 0 0 chr17 80144416 80144439 -15128212 + AT_rich Low_complexity Low_complexity 1 23 0 2 1196 26 0 0 0 chr17 80145311 80145337 -15127314 + AT_rich Low_complexity Low_complexity 1 26 0 2 1196 189 276 0 17 chr17 80145718 80145777 -15126874 + MIRb SINE MIR 3 60 -208 2 1196 337 314 77 13 chr17 80146559 80146714 -15125937 + MIR SINE MIR 3 167 -95 2 1196 2173 212 111 57 chr17 80146987 80147638 -15125013 - RMER6C LTR ERVK 0 690 5 2 1196 23 33 0 0 chr17 80147753 80147783 -15124868 + AT_rich Low_complexity Low_complexity 1 30 0 2 1196 222 62 0 0 chr17 80147861 80147893 -15124758 + (CAG)n Simple_repeat Simple_repeat 1 32 0 2 1196 264 218 31 94 chr17 80147951 80148047 -15124604 - MIR SINE MIR -65 197 108 2 1196 406 262 54 51 chr17 80148482 80148697 -15123954 + ORR1E LTR MaLR 154 364 -10 2 1196 759 173 15 0 chr17 80150428 80150561 -15122090 - URR1B DNA MER1_type 0 225 91 2 1196 620 241 42 30 chr17 80152307 80152474 -15120177 - B3 SINE B2 0 216 48 2 1196 1181 285 61 0 chr17 80152556 80152868 -15119783 + MER2 DNA MER2_type 10 340 -5 2 1196 187 154 189 19 chr17 80153816 80153869 -15118782 + L3 LINE CR1 1891 1952 -2537 2 1196 286 250 29 14 chr17 80154016 80154085 -15118566 - B4A SINE B4 -215 77 8 2 1196 231 235 12 12 chr17 80155703 80155789 -15116862 + (TTTG)n Simple_repeat Simple_repeat 3 88 0 2 1196 507 296 122 30 chr17 80156324 80156415 -15116236 - ORR1E LTR MaLR -108 251 147 2 1196 744 89 0 0 chr17 80156415 80156538 -15116113 + (TC)n Simple_repeat Simple_repeat 2 124 0 2 1196 507 296 122 30 chr17 80156538 80156676 -15115975 - ORR1E LTR MaLR -213 146 2 2 1196 459 0 0 0 chr17 80157173 80157224 -15115427 + (TC)n Simple_repeat Simple_repeat 1 51 0 2 1196 580 87 22 0 chr17 80157408 80157500 -15115151 + (TC)n Simple_repeat Simple_repeat 1 94 0 2 1196 1125 121 176 10 chr17 80158113 80158306 -15114345 + URR1B DNA MER1_type 1 225 0 2 1196 1186 269 99 8 chr17 80158470 80158822 -15113829 - MTEa-int LTR MaLR -1196 384 1 2 1196 363 239 21 54 chr17 80158822 80158915 -15113736 - MTEa LTR MaLR 0 379 290 2 1196 1889 282 79 43 chr17 80158950 80159608 -15113043 - ORR1E-int LTR MaLR -895 685 4 2 1196 639 330 37 90 chr17 80159613 80159992 -15112659 - ORR1E LTR MaLR 0 359 1 2 1196 278 267 40 59 chr17 80160362 80160475 -15112176 - MLT1A1 LTR MaLR -257 117 4 2 1196 201 74 0 0 chr17 80162053 80162080 -15110571 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 2 1196 697 195 75 47 chr17 80162093 80162322 -15110329 - Lx4B LINE L1 -49 7009 6702 2 1196 1601 122 12 16 chr17 80162315 80162573 -15110078 - L1_Mur2 LINE L1 -1698 4179 3923 2 1196 1935 135 0 70 chr17 80162924 80163266 -15109385 + ORR1A3 LTR MaLR 1 318 -8 2 1196 180 0 0 0 chr17 80164045 80164065 -15108586 + (TTG)n Simple_repeat Simple_repeat 3 22 0 2 1196 219 69 0 0 chr17 80164065 80164094 -15108557 + (ATG)n Simple_repeat Simple_repeat 1 29 0 2 1196 872 223 56 59 chr17 80165615 80165918 -15106733 - MTD LTR MaLR -14 405 113 2 1196 232 294 47 0 chr17 80166983 80167068 -15105583 + MER5B DNA MER1_type 87 175 -3 2 1196 465 34 0 0 chr17 80167415 80167474 -15105177 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 1196 396 0 0 0 chr17 80167474 80167517 -15105134 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1196 299 292 55 55 chr17 80167803 80167930 -15104721 + MLT1K LTR MaLR 84 210 -198 2 1196 207 0 0 0 chr17 80168476 80168499 -15104152 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1196 340 341 95 74 chr17 80168647 80169037 -15103614 + MLT1K LTR MaLR 197 594 -1 2 1196 2889 248 72 31 chr17 80170207 80171138 -15101513 + RCHARR1 DNA MER1_type 3 971 -3 2 1196 213 290 32 0 chr17 80172499 80172561 -15100090 + B4A SINE B4 82 145 -147 2 1196 390 216 16 18 chr17 80172517 80172618 -15100033 + PB1D7 SINE Alu 16 115 -5 2 1196 33 43 0 0 chr17 80172701 80172748 -15099903 + AT_rich Low_complexity Low_complexity 1 47 0 2 1196 1996 234 98 18 chr17 80172983 80173474 -15099177 + Lx6 LINE L1 6931 7460 0 2 1196 693 0 0 0 chr17 80173600 80173677 -15098974 + (GGAGAA)n Simple_repeat Simple_repeat 5 81 0 2 1196 346 320 76 65 chr17 80175057 80175241 -15097410 + ORR1E LTR MaLR 7 192 -167 2 1196 2057 109 65 45 chr17 80175555 80175911 -15096740 - ORR1B2 LTR MaLR 0 367 5 2 1196 1604 36 0 20 chr17 80176243 80176440 -15096211 + B2_Mm1a SINE B2 1 193 0 2 1196 2391 77 6 71 chr17 80176564 80176914 -15095737 - ORR1A2 LTR MaLR 0 327 1 2 1196 437 256 41 8 chr17 80178156 80178278 -15094373 + B1F SINE Alu 15 140 -9 2 1196 5402 134 167 11 chr17 80179065 80180029 -15092622 + RLTR13D3 LTR ERVK 1 1114 0 2 1196 504 330 128 57 chr17 80181805 80182101 -15090550 - ORR1E LTR MaLR -36 323 7 2 1196 216 0 0 0 chr17 80182204 80182228 -15090423 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1196 377 106 90 45 chr17 80182276 80182365 -15090286 - PB1 SINE Alu -33 94 2 2 1196 250 345 120 11 chr17 80182433 80182700 -15089951 + L2 LINE L2 1818 2113 -1306 2 1196 1404 127 56 5 chr17 80183192 80183406 -15089245 + URR1A DNA MER1_type 2 226 0 2 1196 533 314 38 26 chr17 80185370 80185635 -15087016 - L1M3 LINE L1 -1008 5132 4865 2 1196 736 324 44 33 chr17 80185632 80186021 -15086630 + L1MA9 LINE L1 5569 5961 -351 2 1196 230 219 103 58 chr17 80186442 80186529 -15086122 + L1MA9 LINE L1 5985 6075 -237 2 1196 584 223 141 37 chr17 80187540 80187703 -15084948 - B3A SINE B2 -16 182 3 2 1196 232 314 47 55 chr17 80187712 80187840 -15084811 + MamRep434 DNA TcMar 138 264 -162 2 1196 21 0 0 0 chr17 80188022 80188043 -15084608 + AT_rich Low_complexity Low_complexity 1 21 0 2 1196 522 0 0 0 chr17 80189283 80189341 -15083310 + (TC)n Simple_repeat Simple_repeat 1 58 0 2 1196 201 147 0 0 chr17 80189992 80190026 -15082625 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 1196 249 108 0 0 chr17 80190172 80190209 -15082442 + (CTG)n Simple_repeat Simple_repeat 2 38 0 2 1196 271 283 49 24 chr17 80190792 80190915 -15081736 - MLT1A1 LTR MaLR -12 396 271 2 1196 214 288 34 0 chr17 80191066 80191125 -15081526 + B1_Mus1 SINE Alu 29 89 -59 2 1196 242 347 68 57 chr17 80191607 80191784 -15080867 - MLT1K LTR MaLR 0 595 417 2 1196 300 342 81 24 chr17 80191798 80192044 -15080607 - MLT1K LTR MaLR -230 365 106 2 1196 183 80 0 0 chr17 80193457 80193482 -15079169 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1196 22 35 0 0 chr17 80193656 80193685 -15078966 + AT_rich Low_complexity Low_complexity 1 29 0 2 1196 1697 164 176 21 chr17 80193690 80194071 -15078580 + RLTR20A LTR ERVK 1 440 -101 2 1196 1116 35 0 0 chr17 80194073 80194214 -15078437 + (TG)n Simple_repeat Simple_repeat 2 142 0 2 1196 231 135 0 0 chr17 80194223 80194260 -15078391 + RLTR20A LTR ERVK 505 541 0 2 1196 647 106 19 3 chr17 80194297 80194398 -15078253 - B1_Mus2 SINE Alu -5 142 2 2 1196 318 360 65 17 chr17 80194713 80194945 -15077706 - MLT1A LTR MaLR 0 374 132 2 1196 605 304 27 86 chr17 80194991 80195334 -15077317 + ORR1E LTR MaLR 29 379 0 2 1196 444 295 121 23 chr17 80195431 80195700 -15076951 - MLT1A LTR MaLR -74 300 4 2 1196 620 316 52 88 chr17 80196551 80196915 -15075736 + ORR1E LTR MaLR 9 359 0 2 1196 246 352 0 0 chr17 80197631 80197719 -15074932 + (TG)n Simple_repeat Simple_repeat 1 88 0 2 1196 611 65 21 0 chr17 80198213 80198306 -15074345 - B1_Mur4 SINE Alu -55 95 1 2 1196 2119 139 34 58 chr17 80198499 80198616 -15074035 - MTC LTR MaLR -2 419 316 2 1196 1667 21 21 0 chr17 80198616 80198805 -15073846 + B2_Mm1t SINE B2 1 193 0 2 1196 2119 139 34 58 chr17 80198805 80199098 -15073553 - MTC LTR MaLR -106 315 19 2 1196 555 221 62 16 chr17 80199944 80200073 -15072578 + ID_B1 SINE B4 74 208 -16 2 1196 206 208 19 0 chr17 80200103 80200156 -15072495 + GA-rich Low_complexity Low_complexity 2 55 0 2 1196 1305 83 0 0 chr17 80200161 80200341 -15072310 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 2 1196 222 91 0 52 chr17 80203145 80203203 -15069448 + (TTTTG)n Simple_repeat Simple_repeat 2 56 0 2 1196 482 137 11 0 chr17 80203870 80203965 -15068686 + (TC)n Simple_repeat Simple_repeat 1 96 0 2 1196 207 186 23 0 chr17 80203974 80204017 -15068634 + C-rich Low_complexity Low_complexity 5 48 0 2 1196 191 167 45 15 chr17 80204911 80204978 -15067673 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 2 1196 261 0 0 0 chr17 80204987 80205016 -15067635 + (CATA)n Simple_repeat Simple_repeat 2 30 0 2 1196 461 110 12 0 chr17 80205052 80205134 -15067517 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 2 1196 1989 134 77 9 chr17 80205136 80205475 -15067176 + ORR1B2 LTR MaLR 6 367 0 2 1196 987 286 94 6 chr17 80205516 80205867 -15066784 + MLT1B LTR MaLR 5 386 -4 2 1196 763 120 23 11 chr17 80205900 80206077 -15066574 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 2 1196 284 70 23 0 chr17 80206080 80206123 -15066528 + (CATA)n Simple_repeat Simple_repeat 2 45 0 2 1196 739 313 66 31 chr17 80206176 80206433 -15066218 + B4 SINE B4 2 267 -25 2 1196 486 0 0 0 chr17 80206436 80206490 -15066161 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 1196 772 185 58 39 chr17 80206967 80207219 -15065432 + RLTR41 LTR ERV1 1 299 -147 2 1196 1075 59 0 22 chr17 80207219 80207357 -15065294 + B1_Mus2 SINE Alu 2 136 -11 2 1196 655 217 0 35 chr17 80207413 80207556 -15065095 + RLTR41 LTR ERV1 307 444 -2 2 1196 207 0 0 0 chr17 80207637 80207660 -15064991 + (TGGGGG)n Simple_repeat Simple_repeat 6 28 0 2 1196 466 253 0 0 chr17 80208173 80208347 -15064304 + (CAGC)n Simple_repeat Simple_repeat 1 174 0 2 1196 3426 30 2 2 chr17 80210300 80210696 -15061955 + MTA_Mm LTR MaLR 1 396 0 2 1196 743 291 35 89 chr17 80210729 80211099 -15061552 + ORR1E LTR MaLR 1 350 -9 2 1196 226 280 55 18 chr17 80211382 80211491 -15061160 - RMER12 LTR ERVK -467 855 743 3 1196 594 292 53 60 chr17 80211639 80211905 -15060746 + B4A SINE B4 21 284 -8 3 1196 1522 196 52 3 chr17 80211991 80212278 -15060373 + Lx5 LINE L1 6739 7039 -11 3 1196 22 56 0 0 chr17 80212280 80212316 -15060335 + AT_rich Low_complexity Low_complexity 1 36 0 3 1196 838 156 28 0 chr17 80212329 80212470 -15060181 + B1_Mur4 SINE Alu 6 150 0 3 1196 1304 275 42 9 chr17 80212729 80213155 -15059496 - L1MA4 LINE L1 -209 6091 5652 3 1196 444 295 154 28 chr17 80214075 80214361 -15058290 - RMER5 LTR ERV1 -2 532 211 3 1196 270 224 30 0 chr17 80214426 80214493 -15058158 - RMER5 LTR ERV1 -433 101 33 3 1196 540 273 40 0 chr17 80214539 80214689 -15057962 - RSINE1 SINE B4 -8 157 2 3 1196 464 259 119 25 chr17 80215002 80215204 -15057447 + ID_B1 SINE B4 2 222 -2 3 1196 1081 82 0 0 chr17 80215745 80215880 -15056771 + B1_Mus1 SINE Alu 1 135 -13 3 1196 914 7 22 29 chr17 80215884 80216023 -15056628 + (GAGAA)n Simple_repeat Simple_repeat 5 142 0 3 1197 1182 48 7 0 chr17 80216101 80216247 -15056404 + B1_Mm SINE Alu 1 147 0 3 1197 563 228 222 5 chr17 80216279 80216491 -15056160 + L1MDa LINE L1 25 282 -6351 3 1197 445 274 0 17 chr17 80216507 80216622 -15056029 + PB1D9 SINE Alu 8 120 0 3 1197 1259 174 27 14 chr17 80216718 80216939 -15055712 + URR1A DNA MER1_type 1 224 -2 3 1197 403 262 96 7 chr17 80217091 80217237 -15055414 - B4 SINE B4 -133 159 1 3 1197 353 347 97 38 chr17 80218723 80218752 -15053899 - L1MB8 LINE L1 -29 6149 6120 3 1197 3260 43 8 2 chr17 80218752 80219146 -15053505 + MTA_Mm LTR MaLR 1 396 0 3 1197 353 347 97 38 chr17 80219146 80219305 -15053346 - L1MB8 LINE L1 -59 6119 5944 3 1197 2742 151 45 10 chr17 80219305 80219793 -15052858 - RLTR16 LTR ERVK 0 505 1 3 1197 353 347 97 38 chr17 80219793 80220047 -15052604 - L1MB8 LINE L1 -235 5943 5680 3 1197 857 118 112 0 chr17 80220191 80220343 -15052308 - URR1A DNA MER1_type 0 226 58 3 1197 2395 88 5 76 chr17 80222112 80222493 -15050158 + RLTR10D LTR ERVK 1 354 -5 3 1197 552 266 215 0 chr17 80223324 80223501 -15049150 - B3 SINE B2 0 216 2 3 1197 472 310 68 30 chr17 80223670 80223933 -15048718 + L1M5 LINE L1 5293 5565 -675 3 1197 296 330 9 18 chr17 80225119 80225230 -15047421 - RMER20B LTR ERVK -9 618 509 3 1197 384 252 78 152 chr17 80225222 80225465 -15047186 - RMER20B LTR ERVK -26 601 377 3 1197 3034 146 18 0 chr17 80226328 80226786 -15045865 - Lx2B LINE L1 0 7000 6535 3 1197 13888 145 35 4 chr17 80226786 80226989 -15045662 - L1_Mur1 LINE L1 -1596 4290 4067 3 1197 549 0 0 0 chr17 80226989 80227050 -15045601 + (GA)n Simple_repeat Simple_repeat 1 61 0 3 1197 13888 145 35 4 chr17 80227050 80229245 -15043406 - L1_Mur1 LINE L1 -1820 4066 1818 3 1197 3646 162 86 39 chr17 80229247 80229592 -15043059 + MYSERV16_I-int LTR ERVK 127 467 -1859 3 1197 636 106 0 0 chr17 80229592 80229686 -15042965 + (TA)n Simple_repeat Simple_repeat 2 95 0 3 1197 3646 178 73 57 chr17 80229686 80230185 -15042466 + MYSERV16_I-int LTR ERVK 468 932 -1394 3 1197 624 63 53 0 chr17 80230188 80230283 -15042368 + L1_Mm LINE L1 1894 1993 -3890 3 1197 4818 154 69 20 chr17 80230305 80231356 -15041295 + MYSERV16_I-int LTR ERVK 1355 2840 -2 3 1197 1946 238 67 17 chr17 80231356 80231895 -15040756 + RLTR20A2 LTR ERVK 1 566 -12 3 1197 2060 173 62 10 chr17 80232334 80232719 -15039932 + MTB_Mm LTR MaLR 1 405 -2 3 1197 553 195 127 0 chr17 80233095 80233213 -15039438 - B3 SINE B2 0 216 84 3 1197 1142 137 108 26 chr17 80233213 80233445 -15039206 + RMER1B Other Other 810 1060 -6 3 1197 306 256 46 11 chr17 80233653 80233740 -15038911 - L1M2 LINE L1 -1540 4603 4514 3 1197 1247 68 0 0 chr17 80233866 80234013 -15038638 + B1_Mus2 SINE Alu 1 147 0 3 1197 624 232 4 0 chr17 80234195 80234676 -15037975 + (CA)n Simple_repeat Simple_repeat 1 483 0 3 1197 254 234 15 45 chr17 80234871 80234938 -15037713 - MLT1L LTR MaLR -385 225 161 3 1197 1274 63 5 0 chr17 80235793 80235999 -15036652 + (TG)n Simple_repeat Simple_repeat 1 207 0 3 1197 804 237 87 106 chr17 80236051 80236315 -15036336 - B4 SINE B4 -32 260 2 3 1197 304 246 0 0 chr17 80236651 80236720 -15035931 - L1MD3 LINE L1 -13 7982 7914 3 1197 263 336 19 0 chr17 80236850 80236954 -15035697 - L1MD3 LINE L1 -275 7720 7615 3 1197 1344 127 9 9 chr17 80237223 80237437 -15035214 - URR1B DNA MER1_type 0 225 12 3 1197 569 247 32 121 chr17 80237437 80237464 -15035187 + CYRA11_Mm Unknown Y-chromosome 209 390 -227 3 1197 405 233 33 22 chr17 80238025 80238117 -15034534 - PB1 SINE Alu -26 101 9 3 1197 214 246 120 120 chr17 80238117 80238150 -15034501 - ID_B1 SINE B4 -53 171 47 3 1197 3878 134 31 13 chr17 80239381 80239992 -15032659 + Lx3C LINE L1 6351 6972 -4 3 1197 25 31 0 0 chr17 80239993 80240025 -15032626 + AT_rich Low_complexity Low_complexity 1 32 0 3 1197 1254 48 7 0 chr17 80240032 80240178 -15032473 + B1_Mus1 SINE Alu 2 148 0 3 1197 1160 130 67 39 chr17 80240482 80240690 -15031961 - URR1B DNA MER1_type -1 224 11 3 1197 326 287 140 0 chr17 80240847 80240983 -15031668 + HAL1-3A_ME LINE L1 2284 2438 -420 3 1197 4905 121 9 0 chr17 80241061 80241755 -15030896 + Lx LINE L1 5948 6647 -7 3 1197 310 308 98 0 chr17 80242615 80242758 -15029893 + MLT1N2 LTR MaLR 403 559 -3 3 1197 181 337 113 5 chr17 80242999 80243202 -15029449 + L2 LINE L2 2743 2967 -452 3 1197 715 281 127 12 chr17 80243931 80244176 -15028475 + B4A SINE B4 1 273 -19 3 1197 192 77 0 0 chr17 80244176 80244202 -15028449 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 1197 282 300 57 16 chr17 80245051 80245173 -15027478 - MIRc SINE MIR -74 194 68 3 1197 601 203 19 115 chr17 80245183 80245339 -15027312 + B1_Mur1 SINE Alu 9 149 0 3 1197 360 0 0 0 chr17 80245463 80245503 -15027148 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1197 380 223 25 126 chr17 80245610 80245769 -15026882 - B1F2 SINE Alu -6 143 1 3 1197 216 0 0 0 chr17 80245991 80246015 -15026636 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 1197 810 73 0 0 chr17 80246483 80246593 -15026058 + (GA)n Simple_repeat Simple_repeat 1 110 0 3 1197 394 280 178 37 chr17 80246627 80246868 -15025783 - B4 SINE B4 -17 275 1 3 1197 718 198 83 17 chr17 80247048 80247228 -15025423 + B3A SINE B2 21 212 -4 3 1197 342 0 0 0 chr17 80248090 80248128 -15024523 + (TC)n Simple_repeat Simple_repeat 1 38 0 3 1197 297 0 0 0 chr17 80248128 80248160 -15024491 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 1197 21 57 0 0 chr17 80248675 80248710 -15023941 + AT_rich Low_complexity Low_complexity 1 35 0 3 1197 201 176 0 0 chr17 80249756 80249790 -15022861 + A-rich Low_complexity Low_complexity 1 34 0 3 1197 1021 132 189 5 chr17 80250722 80250912 -15021739 + URR1B DNA MER1_type 1 225 0 3 1197 1477 113 334 20 chr17 80252415 80252730 -15019921 + MTC LTR MaLR 1 413 -8 3 1197 324 0 0 0 chr17 80254997 80255033 -15017618 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1197 180 194 0 0 chr17 80255180 80255211 -15017440 - L2 LINE L2 -1897 1522 1492 3 1197 765 203 216 7 chr17 80256114 80256387 -15016264 + Lx9 LINE L1 7315 7644 0 3 1197 26 0 0 0 chr17 80256622 80256648 -15016003 + AT_rich Low_complexity Low_complexity 1 26 0 3 1197 234 0 0 0 chr17 80256685 80256711 -15015940 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1197 460 227 217 13 chr17 80256778 80256930 -15015721 + B3A SINE B2 1 183 -15 3 1197 1271 109 17 0 chr17 80256957 80257132 -15015519 + B2_Mm1t SINE B2 1 178 -15 3 1197 420 77 181 23 chr17 80257146 80257254 -15015397 + B2_Mm2 SINE B2 47 187 -6 3 1197 263 326 139 15 chr17 80257454 80257591 -15015060 - RSINE1 SINE B4 -8 157 4 3 1197 26 30 0 0 chr17 80257648 80257681 -15014970 + AT_rich Low_complexity Low_complexity 1 33 0 3 1197 565 175 20 105 chr17 80257703 80257856 -15014795 - B1_Mur1 SINE Alu -6 143 4 3 1197 229 283 97 108 chr17 80257856 80257888 -15014763 - B4 SINE B4 -71 220 38 3 1197 345 242 196 18 chr17 80257919 80258087 -15014564 + L1ME3B LINE L1 5708 5905 -335 3 1197 255 112 29 16 chr17 80258100 80258156 -15014495 + B1_Mur4 SINE Alu 14 69 -81 3 1197 434 266 58 77 chr17 80258765 80258920 -15013731 + RSINE1 SINE B4 10 161 -4 3 1197 239 233 25 88 chr17 80259297 80259377 -15013274 + B2_Mm2 SINE B2 3 77 -118 3 1197 241 284 0 82 chr17 80259308 80259381 -15013270 + ID4_ SINE ID 13 79 -4 3 1197 440 261 83 48 chr17 80259679 80259824 -15012827 - MER20 DNA MER1_type -14 205 56 3 1197 367 346 30 30 chr17 80261086 80261217 -15011434 + B4 SINE B4 85 215 -77 3 1197 412 267 28 19 chr17 80261338 80261445 -15011206 - PB1D10 SINE Alu -8 109 2 3 1197 234 0 0 0 chr17 80261476 80261502 -15011149 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1197 441 0 0 0 chr17 80262769 80262818 -15009833 + (CGGA)n Simple_repeat Simple_repeat 4 52 0 3 1197 847 164 14 0 chr17 80263274 80263414 -15009237 + B1_Mur4 SINE Alu 6 147 -3 3 1197 374 213 83 45 chr17 80265038 80265171 -15007480 - Lx7 LINE L1 0 7696 7559 3 1197 724 72 27 0 chr17 80265199 80265310 -15007341 + (GGGA)n Simple_repeat Simple_repeat 3 116 0 3 1197 669 86 0 0 chr17 80265312 80265405 -15007246 + (GAAA)n Simple_repeat Simple_repeat 1 93 0 3 1197 258 324 0 0 chr17 80265628 80265696 -15006955 + BC1_Mm scRNA scRNA 14 81 -71 3 1197 183 280 184 18 chr17 80267286 80267395 -15005256 - L2a LINE L2 0 3426 3300 3 1197 484 254 122 64 chr17 80268271 80268582 -15004069 + L1MB3 LINE L1 5855 6183 0 3 1197 194 0 39 0 chr17 80268725 80268751 -15003900 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1197 361 232 19 78 chr17 80269089 80269192 -15003459 + PB1D7 SINE Alu 23 119 -1 3 1197 607 283 152 13 chr17 80269225 80269697 -15002954 + L1M3 LINE L1 3889 4426 -1714 4 1197 1268 84 48 0 chr17 80269697 80269863 -15002788 + B2_Mm1t SINE B2 3 176 -17 4 1197 318 78 371 28 chr17 80269917 80270022 -15002629 + B2_Mm2 SINE B2 47 187 -8 4 1197 8479 31 1 0 chr17 80270241 80271173 -15001478 + L1Md_T LINE L1 5649 6581 -1 4 1197 284 180 0 39 chr17 80272050 80272102 -15000549 + B1_Mus2 SINE Alu 1 50 -97 4 1197 249 33 0 0 chr17 80274881 80274911 -14997740 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1197 549 44 0 0 chr17 80274911 80274978 -14997673 + (GA)n Simple_repeat Simple_repeat 1 68 0 4 1197 1287 55 0 0 chr17 80276863 80277009 -14995642 + B1_Mus1 SINE Alu 2 147 -1 4 1197 196 254 271 0 chr17 80277109 80277227 -14995424 + MIR SINE MIR 111 260 -2 4 1197 1338 6 18 28 chr17 80277549 80278447 -14994204 + (CA)n Simple_repeat Simple_repeat 1 888 0 4 1197 447 258 215 59 chr17 80278473 80278794 -14993857 + L1MC2 LINE L1 5972 6342 -2 4 1197 936 111 72 0 chr17 80278849 80279002 -14993649 + B2_Mm1t SINE B2 2 165 -28 4 1197 332 103 376 27 chr17 80279057 80279166 -14993485 + B2_Mm2 SINE B2 47 193 -2 4 1197 327 273 106 16 chr17 80279547 80279670 -14992981 + L1M5 LINE L1 5635 5768 -356 4 1197 738 122 6 58 chr17 80279748 80280077 -14992574 + (TG)n Simple_repeat Simple_repeat 1 311 0 4 1197 334 281 99 41 chr17 80280078 80280249 -14992402 - B3A SINE B2 -17 181 1 4 1197 1119 76 14 0 chr17 80280873 80281018 -14991633 + B1_Mus2 SINE Alu 1 147 0 4 1197 218 122 24 0 chr17 80281018 80281059 -14991592 + (CAAAAA)n Simple_repeat Simple_repeat 6 47 0 4 1197 556 304 36 10 chr17 80281132 80281325 -14991326 + B4A SINE B4 1 198 -94 4 1197 289 299 208 74 chr17 80281646 80281679 -14990972 + B4A SINE B4 31 57 -235 4 1197 1723 21 0 0 chr17 80281679 80281870 -14990781 + B2_Mm1a SINE B2 1 191 -2 4 1197 289 299 208 74 chr17 80281870 80282067 -14990584 + B4A SINE B4 58 292 0 4 1197 277 255 143 28 chr17 80282099 80282365 -14990286 + L1M4 LINE L1 1327 1719 -5021 4 1197 1206 54 0 0 chr17 80283224 80283371 -14989280 + B1_Mus2 SINE Alu 1 147 0 4 1197 1050 168 30 5 chr17 80283811 80284014 -14988637 + B3 SINE B2 3 210 -6 4 1197 615 256 58 10 chr17 80284130 80284335 -14988316 + L1M4 LINE L1 4010 4224 -2420 4 1197 489 250 63 31 chr17 80284512 80284735 -14987916 + L1ME1 LINE L1 5612 5841 -338 4 1197 192 234 0 0 chr17 80284741 80284788 -14987863 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 4 1197 382 225 80 18 chr17 80284826 80284939 -14987712 + L1ME1 LINE L1 5868 5987 -192 4 1197 22 94 0 0 chr17 80284956 80285020 -14987631 + AT_rich Low_complexity Low_complexity 1 64 0 4 1197 1669 27 0 0 chr17 80285050 80285238 -14987413 - B2_Mm1a SINE B2 -5 188 1 4 1197 239 204 164 26 chr17 80285245 80285361 -14987290 + L1ME1 LINE L1 6028 6159 -20 4 1197 600 63 0 0 chr17 80285421 80285500 -14987151 + B1_Mur4 SINE Alu 72 150 0 4 1197 24 0 0 0 chr17 80285500 80285524 -14987127 + AT_rich Low_complexity Low_complexity 1 24 0 4 1197 267 299 15 124 chr17 80285602 80285760 -14986891 + B3A SINE B2 1 137 -61 4 1197 201 74 0 0 chr17 80285760 80285787 -14986864 + (CAGA)n Simple_repeat Simple_repeat 1 27 0 4 1197 267 299 15 124 chr17 80285787 80285830 -14986821 + B3A SINE B2 138 180 -18 4 1197 180 163 0 0 chr17 80285839 80285882 -14986769 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1197 721 186 56 21 chr17 80286082 80286225 -14986426 - B1_Mur4 SINE Alu -1 149 2 4 1197 263 281 11 43 chr17 80286551 80286644 -14986007 - MER5A1 DNA MER1_type -34 132 43 4 1197 21 0 0 0 chr17 80287671 80287692 -14984959 + AT_rich Low_complexity Low_complexity 1 21 0 4 1197 832 81 50 22 chr17 80288659 80288798 -14983853 + B1_Mur3 SINE Alu 6 148 -1 4 1197 632 139 23 15 chr17 80289012 80289143 -14983508 - B1_Mur4 SINE Alu -13 137 6 4 1197 1471 182 103 0 chr17 80289601 80289920 -14982731 + MTD LTR MaLR 68 419 0 4 1197 3553 79 116 8 chr17 80289953 80290487 -14982164 + Lx3A LINE L1 6390 6981 0 4 1197 739 90 16 17 chr17 80290499 80290630 -14982021 + B1_Mus1 SINE Alu 1 147 -1 4 1197 212 0 0 35 chr17 80290822 80290851 -14981800 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1197 410 201 142 104 chr17 80292327 80292510 -14980141 + B3A SINE B2 3 192 -6 4 1197 2112 136 107 139 chr17 80293083 80293679 -14978972 + RMER4B LTR ERVK 1 577 -8 4 1197 279 0 0 0 chr17 80293815 80293846 -14978805 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 1197 26 50 0 0 chr17 80294941 80294981 -14977670 + GC_rich Low_complexity Low_complexity 1 40 0 4 1197 219 114 0 0 chr17 80295075 80295110 -14977541 + (CGAG)n Simple_repeat Simple_repeat 4 38 0 4 1197 486 88 0 0 chr17 80296438 80296506 -14976145 + (TTTTC)n Simple_repeat Simple_repeat 4 71 0 4 1197 714 196 0 89 chr17 80296518 80296675 -14975976 - B1_Mm SINE Alu -3 144 2 4 1197 183 42 0 0 chr17 80297297 80297321 -14975330 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 4 1197 206 293 67 0 chr17 80297705 80297780 -14974871 - MIR SINE MIR -13 249 170 4 1197 267 274 165 40 chr17 80298034 80298258 -14974393 + L1MC4a LINE L1 5312 5563 -2319 4 1197 228 274 16 0 chr17 80298453 80298515 -14974136 + CT-rich Low_complexity Low_complexity 2 64 0 4 1197 207 0 0 0 chr17 80298677 80298700 -14973951 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1197 479 290 40 22 chr17 80298704 80298926 -14973725 + L1MC4a LINE L1 5789 6014 -1868 4 1197 236 241 0 36 chr17 80298969 80299025 -14973626 + L1MC4a LINE L1 6089 6142 -1740 4 1197 1306 201 86 71 chr17 80299276 80299340 -14973311 + MTD LTR MaLR 1 54 -365 4 1197 1159 62 14 0 chr17 80299340 80299485 -14973166 - B1_Mm SINE Alu 0 147 1 4 1197 1306 201 86 71 chr17 80299485 80299828 -14972823 + MTD LTR MaLR 55 414 -5 4 1197 677 273 20 61 chr17 80300067 80300313 -14972338 + B4A SINE B4 40 275 -17 4 1197 251 350 0 10 chr17 80301248 80301346 -14971305 + CT-rich Low_complexity Low_complexity 4 100 0 4 1197 292 176 15 67 chr17 80301465 80301599 -14971052 + (TATAA)n Simple_repeat Simple_repeat 5 131 0 4 1197 212 77 26 0 chr17 80301617 80301656 -14970995 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 1197 586 239 147 16 chr17 80301656 80301847 -14970804 + B3 SINE B2 1 216 0 4 1197 429 289 18 0 chr17 80301872 80301986 -14970665 + PB1D10 SINE Alu 1 116 -1 4 1197 235 359 0 0 chr17 80302314 80302392 -14970259 + GA-rich Low_complexity Low_complexity 1 78 0 4 1197 210 71 0 0 chr17 80302496 80302524 -14970127 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 1197 192 40 0 0 chr17 80302599 80302624 -14970027 + (CCCCCA)n Simple_repeat Simple_repeat 3 27 0 4 1197 592 228 114 45 chr17 80303607 80303809 -14968842 - B3 SINE B2 0 216 1 4 1197 183 368 32 0 chr17 80304264 80304359 -14968292 - MIRc SINE MIR -124 144 47 4 1197 433 298 19 38 chr17 80304668 80304825 -14967826 + RSINE1 SINE B4 3 156 -9 4 1197 399 246 71 18 chr17 80305904 80306016 -14966635 + PB1D7 SINE Alu 2 119 -1 4 1197 599 306 103 38 chr17 80306211 80306659 -14965992 - Arthur1 DNA Tip100 -96 3851 3375 4 1197 524 351 31 4 chr17 80306658 80306887 -14965764 - Arthur1 DNA Tip100 -3250 697 463 4 1197 2149 253 27 2 chr17 80308427 80308906 -14963745 + Lx6 LINE L1 6959 7449 -11 4 1197 239 246 0 0 chr17 80308906 80308963 -14963688 - Arthur1 DNA Tip100 -445 3502 3446 4 1197 198 0 0 0 chr17 80309265 80309287 -14963364 + (T)n Simple_repeat Simple_repeat 1 22 0 4 1197 432 37 0 0 chr17 80309605 80309659 -14962992 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 4 1197 205 176 0 0 chr17 80309662 80309696 -14962955 + (TATG)n Simple_repeat Simple_repeat 2 35 0 4 1197 274 313 42 30 chr17 80310017 80310037 -14962614 + CYRA11_Mm Unknown Y-chromosome 151 172 -445 4 1197 904 184 6 0 chr17 80310037 80310205 -14962446 - URR1A DNA MER1_type 0 226 58 4 1197 559 300 41 0 chr17 80310233 80310403 -14962248 + B3A SINE B2 1 177 -21 4 1197 371 307 95 19 chr17 80310473 80310795 -14961856 + MTEa LTR MaLR 4 379 0 4 1197 457 299 62 50 chr17 80311661 80311944 -14960707 + B4 SINE B4 24 274 -18 4 1197 319 21 42 0 chr17 80312476 80312524 -14960127 + (TGGGGG)n Simple_repeat Simple_repeat 3 52 0 4 1197 25 51 0 0 chr17 80312836 80312875 -14959776 + AT_rich Low_complexity Low_complexity 1 39 0 4 1197 306 294 65 0 chr17 80312897 80312989 -14959662 + L1ME3A LINE L1 5456 5553 -611 4 1197 388 288 42 129 chr17 80313147 80313267 -14959384 + MER2 DNA MER2_type 82 204 -141 4 1197 513 292 14 0 chr17 80313267 80313414 -14959237 + B1F SINE Alu 1 149 0 4 1197 388 288 42 129 chr17 80313414 80313580 -14959071 + MER2 DNA MER2_type 205 343 -2 4 1197 522 309 76 0 chr17 80313581 80313843 -14958808 + L1ME3A LINE L1 5608 5889 -284 4 1197 1203 56 0 0 chr17 80314385 80314529 -14958122 + B1_Mus2 SINE Alu 4 147 0 4 1197 743 281 16 16 chr17 80314556 80314744 -14957907 - B3 SINE B2 -24 192 5 4 1197 932 185 121 29 chr17 80314755 80314961 -14957690 + URR1B DNA MER1_type 1 225 0 4 1197 305 245 10 69 chr17 80315027 80315126 -14957525 + B4A SINE B4 137 229 -63 4 1197 438 173 0 12 chr17 80315126 80315208 -14957443 + PB1D9 SINE Alu 1 81 -39 4 1197 908 41 8 0 chr17 80315196 80315319 -14957332 + B1_Mus1 SINE Alu 25 148 0 4 1197 387 36 0 18 chr17 80315339 80315373 -14957278 + B1_Mur4 SINE Alu 90 137 -13 4 1197 291 222 10 82 chr17 80315373 80315387 -14957264 + B4A SINE B4 201 214 -78 4 1197 195 42 0 0 chr17 80315387 80315411 -14957240 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 4 1197 291 222 10 82 chr17 80315419 80315494 -14957157 + B4A SINE B4 215 291 -1 4 1197 217 267 167 10 chr17 80315981 80316083 -14956568 + MIRc SINE MIR 75 192 -76 4 1197 181 324 39 52 chr17 80316391 80316544 -14956107 - L2b LINE L2 -298 3077 2927 4 1197 27 0 0 0 chr17 80318515 80318542 -14954109 + AT_rich Low_complexity Low_complexity 1 27 0 4 1197 232 271 129 0 chr17 80318562 80318647 -14954004 + B3A SINE B2 88 183 -15 4 1197 250 258 15 46 chr17 80320048 80320113 -14952538 + PB1D10 SINE Alu 1 63 -54 4 1197 2161 107 3 0 chr17 80320913 80321232 -14951419 - ORR1A2 LTR MaLR -2 325 6 4 1197 2883 73 5 8 chr17 80321283 80321672 -14950979 - L1Md_F2 LINE L1 0 6582 6195 4 1197 351 0 0 0 chr17 80322074 80322113 -14950538 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1197 195 69 0 0 chr17 80323146 80323175 -14949476 + (TTTTG)n Simple_repeat Simple_repeat 4 32 0 5 1197 874 244 14 37 chr17 80323175 80323392 -14949259 - B3 SINE B2 -4 212 1 5 1197 911 215 37 0 chr17 80323680 80323871 -14948780 + B3A SINE B2 1 198 0 5 1197 201 39 0 0 chr17 80324845 80324871 -14947780 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 5 1197 180 0 0 0 chr17 80324908 80324928 -14947723 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 1197 321 162 67 13 chr17 80324945 80325020 -14947631 - B1_Mus2 SINE Alu -27 120 42 5 1197 384 319 0 0 chr17 80325022 80325160 -14947491 + C-rich Low_complexity Low_complexity 4 141 0 5 1197 301 282 116 27 chr17 80326065 80326211 -14946440 + Arthur1A DNA Tip100 17 175 -2 5 1197 651 223 43 24 chr17 80326440 80326647 -14946004 + RMER21B LTR ERV1 288 498 -344 5 1197 466 256 91 122 chr17 80327250 80327502 -14945149 + B4 SINE B4 1 246 -46 5 1197 285 51 0 0 chr17 80327542 80327581 -14945070 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1197 953 116 13 27 chr17 80328597 80328747 -14943904 - B1_Mur4 SINE Alu -2 148 1 5 1197 533 284 85 65 chr17 80329084 80329521 -14943130 + MLT2B4 LTR ERVL 61 548 -8 5 1197 1981 115 54 9 chr17 80330200 80330515 -14942136 + ORR1A4 LTR MaLR 1 329 0 5 1197 794 222 22 22 chr17 80330564 80330744 -14941907 + URR1B DNA MER1_type 19 198 -27 5 1197 255 309 9 142 chr17 80330744 80330774 -14941877 - CYRA11_Mm Unknown Y-chromosome -249 367 186 5 1197 412 314 37 16 chr17 80331745 80331933 -14940718 - Tigger14a DNA MER2_type -128 196 5 5 1197 324 0 0 0 chr17 80332646 80332682 -14939969 + (T)n Simple_repeat Simple_repeat 1 36 0 5 1197 873 232 88 0 chr17 80334077 80334271 -14938380 + B3 SINE B2 2 212 -4 5 1197 747 174 4 15 chr17 80334555 80334833 -14937818 + (TG)n Simple_repeat Simple_repeat 1 274 0 5 1197 587 206 36 58 chr17 80335647 80335786 -14936865 - ID_B1 SINE B4 0 224 89 5 1197 415 332 36 141 chr17 80335895 80336144 -14936507 + B4 SINE B4 55 277 -15 5 1197 1202 41 7 7 chr17 80336811 80336958 -14935693 + B1_Mm SINE Alu 1 147 0 5 1197 286 329 160 7 chr17 80337135 80337285 -14935366 - MER5B DNA MER1_type -1 177 5 5 1197 242 301 0 14 chr17 80338149 80338223 -14934428 - MER5B DNA MER1_type -87 91 19 5 1197 553 157 22 15 chr17 80338374 80338510 -14934141 + CT-rich Low_complexity Low_complexity 1 137 0 5 1197 238 255 0 0 chr17 80338518 80338565 -14934086 - B1F1 SINE Alu -102 47 1 5 1197 212 327 0 18 chr17 80338654 80338710 -14933941 - L2c LINE L2 -50 3337 3283 5 1197 321 331 10 27 chr17 80338834 80338975 -14933676 + MLT1A1 LTR MaLR 236 408 0 5 1197 200 111 28 0 chr17 80340177 80340213 -14932438 + (CCCCCA)n Simple_repeat Simple_repeat 3 39 0 5 1197 265 251 47 82 chr17 80340274 80340361 -14932290 + ID4_ SINE ID 7 90 -62 5 1197 233 0 62 0 chr17 80340380 80340412 -14932239 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 5 1197 435 95 0 0 chr17 80341182 80341256 -14931395 + (TC)n Simple_repeat Simple_repeat 2 75 0 5 1197 339 44 0 0 chr17 80341256 80341301 -14931350 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1197 218 311 67 67 chr17 80342899 80343092 -14929559 + MIRb SINE MIR 57 249 -19 5 1197 210 37 0 0 chr17 80343578 80343605 -14929046 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 5 1197 289 333 144 61 chr17 80344288 80344601 -14928050 - L2b LINE L2 -5 3370 3032 5 1197 216 231 173 0 chr17 80344825 80344877 -14927774 + RSINE1 SINE B4 44 104 -61 5 1197 1537 278 36 45 chr17 80344894 80345504 -14927147 - Lx8 LINE L1 -884 6760 6179 5 1197 254 261 8 50 chr17 80345506 80345627 -14927024 + (CACCC)n Simple_repeat Simple_repeat 5 120 0 5 1197 1055 30 90 0 chr17 80346360 80346494 -14926157 + B1_Mm SINE Alu 2 147 0 5 1197 832 110 8 0 chr17 80346686 80346804 -14925847 + RLTR20B2 LTR ERVK 1 119 -441 5 1197 1225 180 109 16 chr17 80346803 80347051 -14925600 + RLTR20B2 LTR ERVK 283 553 -7 5 149 282 316 36 2 chr17 80347052 80347175 -14925476 - MTEb LTR MaLR -10 369 243 5 1198 240 342 0 27 chr17 80347524 80347542 -14925109 + B4 SINE B4 72 87 -205 5 1198 526 235 111 22 chr17 80347542 80347615 -14925036 + B1F SINE Alu 3 77 -72 5 1198 915 169 0 0 chr17 80347615 80347757 -14924894 + B1_Mur4 SINE Alu 2 143 -7 5 1198 526 235 111 22 chr17 80347757 80347818 -14924833 + B1F SINE Alu 78 149 0 5 1198 322 339 8 32 chr17 80347970 80348095 -14924556 + MER5B DNA MER1_type 3 124 -54 5 1198 808 247 41 123 chr17 80349833 80350181 -14922470 - ORR1E LTR MaLR -19 360 2 5 1198 804 96 0 0 chr17 80350534 80350649 -14922002 + (CA)n Simple_repeat Simple_repeat 1 115 0 5 1198 688 246 111 28 chr17 80350686 80350903 -14921748 - B4A SINE B4 -55 237 3 5 1198 351 0 0 0 chr17 80351873 80351912 -14920739 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1198 348 194 454 19 chr17 80351992 80352154 -14920497 - B4A SINE B4 -59 233 2 5 1198 21 36 0 0 chr17 80352156 80352184 -14920467 + AT_rich Low_complexity Low_complexity 1 28 0 5 1198 220 136 45 0 chr17 80352640 80352684 -14919967 + G-rich Low_complexity Low_complexity 3 48 0 5 1198 550 282 129 39 chr17 80353387 80353667 -14918984 + ORR1E LTR MaLR 1 305 -54 5 1198 733 287 31 89 chr17 80354788 80355005 -14917646 + B4A SINE B4 1 216 -76 5 1198 252 0 0 0 chr17 80355005 80355033 -14917618 + (CATA)n Simple_repeat Simple_repeat 2 29 0 5 1198 722 255 43 39 chr17 80355043 80355251 -14917400 + B3 SINE B2 2 210 -6 5 1198 733 287 31 89 chr17 80355251 80355313 -14917338 + B4A SINE B4 229 273 -19 5 1198 585 119 0 0 chr17 80355332 80355433 -14917218 + (CA)n Simple_repeat Simple_repeat 1 101 0 5 1198 444 243 19 50 chr17 80355903 80356022 -14916629 - PB1D10 SINE Alu -21 128 1 5 1198 5598 111 65 25 chr17 80356170 80357043 -14915608 + RMER13B LTR ERVK 1 908 0 5 1198 1286 34 0 0 chr17 80357126 80357274 -14915377 + B1_Mus1 SINE Alu 1 148 0 5 1198 334 0 43 0 chr17 80357321 80357367 -14915284 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1198 871 246 35 69 chr17 80358638 80358869 -14913782 + B4 SINE B4 1 223 -69 5 1198 809 198 148 12 chr17 80358923 80359179 -14913472 + Lx9 LINE L1 7352 7642 -2 5 1198 328 151 14 14 chr17 80359216 80359278 -14913373 + GA-rich Low_complexity Low_complexity 5 65 0 5 1198 1307 72 0 6 chr17 80359278 80359459 -14913192 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 5 1198 328 151 14 14 chr17 80359459 80359470 -14913181 + polypurine Low_complexity Low_complexity 66 76 0 5 1198 398 229 319 8 chr17 80359470 80359589 -14913062 + RSINE1 SINE B4 2 157 -8 5 1198 189 0 0 0 chr17 80359604 80359625 -14913026 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1198 243 0 0 0 chr17 80359692 80359719 -14912932 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1198 246 292 172 26 chr17 80360338 80360454 -14912197 - MLT1N2 LTR MaLR -421 141 9 5 1198 1194 257 122 38 chr17 80360570 80361068 -14911583 - L1MB8 LINE L1 -32 6146 5607 5 1198 652 194 23 31 chr17 80361159 80361287 -14911364 - B1_Mur3 SINE Alu 0 149 23 5 1198 231 287 107 49 chr17 80361290 80361440 -14911211 - MIRb SINE MIR -49 159 18 5 1198 354 348 17 17 chr17 80361689 80361809 -14910842 + MLT1L LTR MaLR 125 244 -366 5 1198 586 189 34 51 chr17 80361817 80361934 -14910717 + B1_Mus1 SINE Alu 1 115 -33 5 1198 438 69 0 0 chr17 80361942 80362000 -14910651 + (TAGA)n Simple_repeat Simple_repeat 2 59 0 5 1198 943 9 17 0 chr17 80362000 80362116 -14910535 + (GAGAA)n Simple_repeat Simple_repeat 1 118 0 5 1198 762 235 84 18 chr17 80362119 80362344 -14910307 + B4A SINE B4 1 240 -52 5 1198 468 183 0 0 chr17 80362366 80362459 -14910192 + (TG)n Simple_repeat Simple_repeat 2 94 0 5 1198 305 307 5 59 chr17 80362812 80362999 -14909652 + C-rich Low_complexity Low_complexity 2 178 0 5 1198 220 249 0 15 chr17 80363034 80363176 -14909475 + C-rich Low_complexity Low_complexity 1 139 0 5 1198 235 224 0 17 chr17 80363541 80363600 -14909051 + L1M5 LINE L1 5604 5661 -463 5 1198 450 0 0 0 chr17 80363730 80363780 -14908871 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 1198 270 0 0 0 chr17 80364594 80364624 -14908027 + (GTTTG)n Simple_repeat Simple_repeat 3 32 0 5 1198 621 269 9 69 chr17 80365351 80365567 -14907084 + B3 SINE B2 1 203 -13 5 1198 367 272 10 10 chr17 80365567 80365671 -14906980 + (CA)n Simple_repeat Simple_repeat 1 104 0 5 1198 533 278 71 43 chr17 80365717 80365901 -14906750 + MER58B DNA MER1_type 111 299 -42 5 1198 1186 56 7 0 chr17 80365914 80366058 -14906593 + B1_Mm SINE Alu 2 146 -1 5 1198 648 38 0 0 chr17 80366062 80366141 -14906510 + (GAAA)n Simple_repeat Simple_repeat 2 80 0 5 1198 1776 219 15 68 chr17 80366466 80366988 -14905663 + RLTR20B3 LTR ERVK 67 525 -3 5 1198 353 283 81 0 chr17 80367445 80367544 -14905107 - PB1 SINE Alu -19 108 2 5 1198 940 278 89 40 chr17 80368022 80368370 -14904281 + MTEa LTR MaLR 12 376 -3 5 1198 509 83 14 0 chr17 80369972 80370044 -14902607 + B1_Mur4 SINE Alu 43 115 -35 5 1198 292 284 0 64 chr17 80370044 80370056 -14902595 + MT2B LTR ERVL 224 276 -325 5 1198 1355 208 55 42 chr17 80370067 80370463 -14902188 + RLTR26 LTR ERVK 5 438 -204 5 1198 234 197 155 0 chr17 80370900 80370971 -14901680 - PB1D10 SINE Alu -4 113 32 5 1198 432 204 53 53 chr17 80371463 80371577 -14901074 - PB1D10 SINE Alu -1 116 3 5 1198 814 176 29 0 chr17 80371860 80371996 -14900655 - B1_Mus2 SINE Alu -7 140 1 5 1198 1131 96 0 0 chr17 80372092 80372596 -14900055 + (TG)n Simple_repeat Simple_repeat 1 504 0 6 1198 699 304 43 23 chr17 80372596 80372852 -14899799 - B4 SINE B4 -30 262 2 6 1198 198 0 0 0 chr17 80372979 80373001 -14899650 + (CA)n Simple_repeat Simple_repeat 2 23 0 6 1198 25 31 0 0 chr17 80373001 80373033 -14899618 + AT_rich Low_complexity Low_complexity 1 32 0 6 1198 526 217 132 59 chr17 80373667 80373819 -14898832 - RSINE1 SINE B4 0 165 3 6 1198 572 164 0 9 chr17 80373868 80373979 -14898672 + CT-rich Low_complexity Low_complexity 4 113 0 6 1198 399 263 30 0 chr17 80373982 80374081 -14898570 - ID_B1 SINE B4 0 224 123 6 1198 230 214 0 152 chr17 80374159 80374225 -14898426 + B1_Mm SINE Alu 91 146 -1 6 1198 452 358 72 11 chr17 80374297 80374560 -14898091 - L2a LINE L2 0 3426 3148 6 1198 279 0 0 0 chr17 80374564 80374595 -14898056 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 1198 336 24 0 0 chr17 80374595 80374635 -14898016 + (GA)n Simple_repeat Simple_repeat 1 41 0 6 1198 2458 65 0 47 chr17 80374841 80375179 -14897472 + RLTRETN_Mm LTR ERVK 1 322 0 6 1198 928 287 94 16 chr17 80375185 80375678 -14896973 + Lx9 LINE L1 6886 7416 -228 6 1198 232 234 0 0 chr17 80375682 80375729 -14896922 + (CGTG)n Simple_repeat Simple_repeat 1 47 0 6 1198 1087 188 5 22 chr17 80376480 80376665 -14895986 + B3A SINE B2 1 182 -16 6 1198 676 305 77 60 chr17 80377259 80377611 -14895040 + ORR1E LTR MaLR 2 359 0 6 1198 799 228 309 25 chr17 80377773 80378093 -14894558 - MTD LTR MaLR -4 415 5 6 1198 669 169 102 0 chr17 80378093 80378211 -14894440 + B3 SINE B2 1 130 -86 6 1198 620 127 0 9 chr17 80378255 80378366 -14894285 + (GGA)n Simple_repeat Simple_repeat 2 111 0 6 1198 489 34 0 0 chr17 80378531 80378590 -14894061 + (GA)n Simple_repeat Simple_repeat 1 59 0 6 1198 291 331 69 21 chr17 80379525 80379670 -14892981 + MIRc SINE MIR 80 231 -37 6 1198 181 289 72 63 chr17 80379632 80379743 -14892908 + L3 LINE CR1 852 963 -3526 6 1198 270 56 0 0 chr17 80380114 80380150 -14892501 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1198 511 131 141 0 chr17 80380150 80380249 -14892402 - ORR1C2 LTR MaLR -265 119 7 6 1198 324 362 149 33 chr17 80380424 80380753 -14891898 + MLT1K LTR MaLR 177 543 -52 6 1198 798 156 118 29 chr17 80381169 80381335 -14891316 - B3 SINE B2 -31 164 1 6 1198 4616 175 56 22 chr17 80382603 80383605 -14889046 + Lx4B LINE L1 5629 6637 -421 6 1198 2391 190 45 40 chr17 80383629 80383690 -14888961 - RLTR20B1 LTR ERVK -33 530 470 6 1198 441 0 0 0 chr17 80383690 80383739 -14888912 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1198 2391 190 45 40 chr17 80383739 80384079 -14888572 - RLTR20B1 LTR ERVK -94 469 125 6 1198 2781 132 37 47 chr17 80384079 80384566 -14888085 - RLTR45 LTR ERVK 0 482 1 6 1198 2391 190 45 40 chr17 80384566 80384690 -14887961 - RLTR20B1 LTR ERVK -439 124 1 6 1198 1660 150 7 23 chr17 80384720 80385027 -14887624 + Lx4B LINE L1 6716 7017 -41 6 1198 180 77 0 0 chr17 80385031 80385057 -14887594 + (TTAA)n Simple_repeat Simple_repeat 2 27 0 6 1198 683 203 0 36 chr17 80385070 80385208 -14887443 + MTC-int LTR MaLR 154 286 -972 6 1198 652 219 0 0 chr17 80385200 80385314 -14887337 - B1_Mur4 SINE Alu -36 114 1 6 1198 350 235 0 136 chr17 80385209 80385327 -14887324 - MT2B LTR ERVL -344 257 156 6 1198 934 126 129 18 chr17 80385618 80385788 -14886863 + B2_Mm2 SINE B2 1 189 -6 6 1198 450 0 0 0 chr17 80386086 80386136 -14886515 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 1198 432 0 0 0 chr17 80386136 80386183 -14886468 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 1198 861 173 0 0 chr17 80386189 80386322 -14886329 - B1_Mur3 SINE Alu -16 133 1 6 1198 977 135 0 0 chr17 80386568 80386701 -14885950 + B1_Mur4 SINE Alu 5 137 -13 6 1198 189 0 0 0 chr17 80387968 80387989 -14884662 + (TTG)n Simple_repeat Simple_repeat 1 21 0 6 1198 222 37 0 0 chr17 80388127 80388154 -14884497 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 6 1198 980 257 38 4 chr17 80388155 80388393 -14884258 - B4A SINE B4 -46 246 1 6 1198 456 135 0 0 chr17 80388400 80388474 -14884177 + (TTG)n Simple_repeat Simple_repeat 1 74 0 6 1198 777 127 88 15 chr17 80388475 80388611 -14884040 - B1_Mur4 SINE Alu -3 147 2 6 1198 394 158 211 0 chr17 80390083 80390178 -14882473 - ID_B1 SINE B4 -2 222 108 6 1198 864 170 0 0 chr17 80391210 80391369 -14881282 + CT-rich Low_complexity Low_complexity 4 162 0 6 1198 686 163 0 49 chr17 80391374 80391516 -14881135 - B1_Mur4 SINE Alu 0 150 16 6 1198 876 91 0 0 chr17 80391541 80391673 -14880978 - B2_Mm1a SINE B2 -2 191 60 6 1198 518 261 171 0 chr17 80391682 80391881 -14880770 + MTEa LTR MaLR 142 374 -5 6 1198 204 40 0 0 chr17 80392144 80392169 -14880482 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 6 1198 354 263 201 8 chr17 80392837 80392971 -14879680 + MIR SINE MIR 96 255 -7 6 1198 180 77 0 0 chr17 80393005 80393031 -14879620 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 1198 285 167 0 0 chr17 80393528 80393582 -14879069 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1198 562 305 74 48 chr17 80393585 80393936 -14878715 - Lx9 LINE L1 -15 7629 7270 6 1198 230 259 197 8 chr17 80393969 80394086 -14878565 + Lx9 LINE L1 7052 7190 -454 6 1198 530 211 57 0 chr17 80394139 80394262 -14878389 - B1_Mur4 SINE Alu -20 130 1 6 1198 411 252 29 0 chr17 80395187 80395290 -14877361 - PB1D10 SINE Alu -7 110 5 6 1198 455 244 0 40 chr17 80395549 80395673 -14876978 + PB1D7 SINE Alu 1 119 -1 6 1198 613 142 104 0 chr17 80395717 80395823 -14876828 + B1_Mur4 SINE Alu 10 126 -24 6 1198 432 0 0 0 chr17 80396227 80396275 -14876376 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 1198 341 157 14 0 chr17 80396985 80397004 -14875647 + polypurine Low_complexity Low_complexity 2 20 0 6 1198 746 97 9 0 chr17 80397004 80397117 -14875534 + (GGGA)n Simple_repeat Simple_repeat 3 116 0 6 1198 341 157 14 0 chr17 80397117 80397167 -14875484 + polypurine Low_complexity Low_complexity 21 71 0 6 1198 951 160 0 0 chr17 80397158 80397333 -14875318 + GA-rich Low_complexity Low_complexity 2 176 0 6 1198 5469 67 3 10 chr17 80397533 80398244 -14874407 + L1_Mus2 LINE L1 5861 6566 0 6 1198 252 0 0 0 chr17 80398875 80398903 -14873748 + (A)n Simple_repeat Simple_repeat 1 28 0 6 1198 515 242 32 8 chr17 80399291 80399416 -14873235 + B1_Mur2 SINE Alu 8 135 -14 6 1198 1292 151 52 0 chr17 80399896 80400108 -14872543 - URR1B DNA MER1_type -2 223 1 6 1198 602 298 97 20 chr17 80400165 80400412 -14872239 - MLT1D LTR MaLR -12 493 228 6 1198 457 313 33 7 chr17 80400429 80400580 -14872071 - MLT1D LTR MaLR -348 157 3 6 1198 2421 77 3 63 chr17 80400782 80401130 -14871521 - ORR1A2 LTR MaLR 0 327 1 6 1198 517 315 16 0 chr17 80401244 80401371 -14871280 - B1F SINE Alu -19 130 2 6 1198 277 337 104 11 chr17 80401416 80401599 -14871052 + L2c LINE L2 3112 3311 -76 6 1198 667 292 0 6 chr17 80402487 80402649 -14870002 + RSINE1 SINE B4 3 163 -2 6 1198 216 268 0 0 chr17 80402654 80402725 -14869926 + (CA)n Simple_repeat Simple_repeat 2 72 0 6 1198 22 0 0 0 chr17 80402725 80402747 -14869904 + AT_rich Low_complexity Low_complexity 1 22 0 6 1198 180 0 0 0 chr17 80402861 80402881 -14869770 + (GGGTG)n Simple_repeat Simple_repeat 2 21 0 6 1198 1272 44 0 0 chr17 80403036 80403196 -14869455 + B2_Mm1t SINE B2 1 160 -33 6 1198 315 0 0 0 chr17 80403196 80403231 -14869420 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 6 1198 1118 188 14 14 chr17 80403248 80403459 -14869192 + B3 SINE B2 2 212 -4 6 1198 495 0 0 0 chr17 80403502 80403557 -14869094 + (TTTTG)n Simple_repeat Simple_repeat 5 59 0 6 1198 390 138 45 9 chr17 80404724 80404834 -14867817 + (TA)n Simple_repeat Simple_repeat 2 115 0 6 1198 1736 163 40 95 chr17 80406217 80406638 -14866013 - RMER10B LTR ERVL 0 398 1 6 1198 357 24 0 0 chr17 80406784 80406826 -14865825 + (GTTTG)n Simple_repeat Simple_repeat 2 43 0 6 1198 439 170 75 0 chr17 80406831 80406925 -14865726 - B1_Mur3 SINE Alu -6 143 43 6 1198 257 225 99 0 chr17 80406865 80406936 -14865715 - MT2B LTR ERVL -338 263 186 6 1198 655 109 0 15 chr17 80407010 80407141 -14865510 + (CA)n Simple_repeat Simple_repeat 2 130 0 6 1198 724 234 165 62 chr17 80407144 80407545 -14865106 + RMER10A LTR ERVL 1 442 0 6 1198 310 197 0 0 chr17 80408019 80408080 -14864571 - MIR3 SINE MIR -32 176 116 6 1198 282 233 200 40 chr17 80408494 80408619 -14864032 + B1F SINE Alu 5 149 0 6 1198 408 20 0 0 chr17 80409941 80409990 -14862661 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1198 662 166 15 11 chr17 80410040 80410311 -14862340 + (TG)n Simple_repeat Simple_repeat 1 272 0 6 1198 1298 14 0 0 chr17 80410336 80410482 -14862169 + B1_Mm SINE Alu 2 147 0 6 1198 1247 204 82 19 chr17 80411232 80411502 -14861149 + Lx5 LINE L1 6764 7050 0 6 1198 234 279 40 115 chr17 80412154 80412328 -14860323 + B3A SINE B2 32 192 -6 6 1198 1085 89 14 0 chr17 80412341 80412487 -14860164 - B1_Mur4 SINE Alu -1 149 2 6 1198 23 33 0 0 chr17 80412488 80412518 -14860133 + AT_rich Low_complexity Low_complexity 1 30 0 6 1198 1069 181 20 0 chr17 80412518 80412717 -14859934 + B3 SINE B2 9 211 -5 6 1198 773 164 50 76 chr17 80413101 80413299 -14859352 - B2_Mm2 SINE B2 -2 193 1 6 1198 325 277 96 0 chr17 80414965 80415048 -14857603 + B3A SINE B2 1 91 -107 6 1198 342 0 0 0 chr17 80415093 80415131 -14857520 + (TC)n Simple_repeat Simple_repeat 1 38 0 6 1198 441 0 0 0 chr17 80415131 80415179 -14857472 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 1198 594 148 0 0 chr17 80415187 80415288 -14857363 + (GA)n Simple_repeat Simple_repeat 2 102 0 7 1198 908 174 0 0 chr17 80415290 80415434 -14857217 - B1_Mur3 SINE Alu -5 144 1 7 1198 1282 76 35 71 chr17 80415547 80415705 -14856946 - B2_Mm2 SINE B2 -3 192 41 7 1198 1717 26 0 0 chr17 80415705 80415898 -14856753 - B2_Mm1a SINE B2 0 193 1 7 1198 1282 76 35 71 chr17 80415898 80415937 -14856714 - B2_Mm2 SINE B2 -155 40 2 7 1198 1260 58 75 0 chr17 80415948 80416121 -14856530 - B2_Mm1a SINE B2 -6 187 2 7 1198 201 132 0 0 chr17 80416443 80416481 -14856170 + (CTG)n Simple_repeat Simple_repeat 1 38 0 7 1198 712 129 129 0 chr17 80416516 80416640 -14856011 - B1_Mus1 SINE Alu -7 141 2 7 1198 260 308 77 0 chr17 80417259 80417363 -14855288 + MTE2b LTR MaLR 140 251 -128 7 1198 253 203 141 0 chr17 80417379 80417443 -14855208 + MTE2b LTR MaLR 307 379 0 7 1198 200 98 73 0 chr17 80417923 80417964 -14854687 + (TA)n Simple_repeat Simple_repeat 2 45 0 7 1198 832 239 39 19 chr17 80418915 80419120 -14853531 + B3 SINE B2 1 209 -7 7 1198 300 53 0 0 chr17 80419123 80419161 -14853490 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 7 1198 594 0 0 0 chr17 80419169 80419235 -14853416 + (TTCC)n Simple_repeat Simple_repeat 3 68 0 7 1198 265 241 42 84 chr17 80419363 80419458 -14853193 + PB1D7 SINE Alu 21 111 -9 7 1198 642 164 16 0 chr17 80419490 80419617 -14853034 + RLTR14 LTR ERV1 4 132 -250 7 1198 899 131 7 0 chr17 80419617 80419762 -14852889 + B1_Mus1 SINE Alu 3 148 0 7 1198 1378 196 19 53 chr17 80419732 80419893 -14852758 + RLTR14 LTR ERV1 71 233 -149 7 1198 203 0 37 0 chr17 80419893 80419920 -14852731 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 7 1198 1378 196 19 53 chr17 80419920 80419949 -14852702 + RLTR14 LTR ERV1 234 260 -122 7 1198 833 137 94 33 chr17 80419949 80420130 -14852521 + B2_Mm2 SINE B2 4 195 0 7 1198 1378 196 19 53 chr17 80420130 80420261 -14852390 + RLTR14 LTR ERV1 261 381 -1 7 1198 402 21 0 0 chr17 80420270 80420317 -14852334 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 1198 4149 51 15 24 chr17 80420331 80420387 -14852264 - L1Md_F2 LINE L1 -1 6581 6537 7 1198 1100 90 5 142 chr17 80420387 80420606 -14852045 - B2_Mm1a SINE B2 -3 190 2 7 1198 4149 51 15 24 chr17 80420606 80421092 -14851559 - L1Md_F2 LINE L1 -46 6536 6045 7 1198 522 161 0 11 chr17 80421098 80421186 -14851465 - B1_Mus2 SINE Alu -6 141 55 7 1198 672 94 0 0 chr17 80421205 80421301 -14851350 + B2_Mm2 SINE B2 48 143 -52 7 1198 438 75 0 0 chr17 80421311 80421378 -14851273 + (TAAA)n Simple_repeat Simple_repeat 3 69 0 7 1198 535 249 80 16 chr17 80422209 80422397 -14850254 - RLTR23 LTR ERV1 -2 428 229 7 1198 265 271 82 33 chr17 80422588 80422710 -14849941 + RMER2 LTR ERV1 436 563 -4 7 1198 3196 129 35 61 chr17 80422737 80423372 -14849279 - RLTR25B LTR ERVK -410 618 1 7 1198 655 75 21 0 chr17 80423467 80423561 -14849090 - B1_Mus2 SINE Alu 0 147 52 7 1198 2728 48 26 11 chr17 80423589 80423969 -14848682 + MTA_Mm LTR MaLR 1 386 -10 7 1198 8004 64 37 4 chr17 80423975 80425038 -14847613 + MTA_Mm-int LTR MaLR 1 1098 0 7 1198 3216 51 8 8 chr17 80425038 80425434 -14847217 + MTA_Mm LTR MaLR 1 396 0 7 1198 523 278 23 0 chr17 80425679 80425812 -14846839 - RSINE1 SINE B4 -18 147 12 7 1198 213 182 0 0 chr17 80426542 80426575 -14846076 + polypurine Low_complexity Low_complexity 4 36 0 7 1198 540 234 15 23 chr17 80426601 80426732 -14845919 + B3A SINE B2 28 157 -41 7 1198 589 130 143 24 chr17 80426757 80426883 -14845768 + B1_Mur1 SINE Alu 9 149 0 7 1198 228 250 141 0 chr17 80426939 80427003 -14845648 + RSINE1 SINE B4 90 162 -3 7 1198 872 122 6 69 chr17 80427928 80428087 -14844564 + B1_Mur4 SINE Alu 2 150 0 7 1198 257 328 24 57 chr17 80428166 80428289 -14844362 + B3 SINE B2 65 183 -33 7 1198 203 79 26 0 chr17 80428291 80428329 -14844322 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1198 555 186 44 125 chr17 80428428 80428588 -14844063 + B1_Mur2 SINE Alu 3 149 0 7 1198 232 231 46 46 chr17 80428865 80428974 -14843677 + L1M3 LINE L1 4897 5005 -1135 7 1198 300 293 24 12 chr17 80428979 80429062 -14843589 - Charlie4z DNA MER1_type -73 94 11 7 1198 25 31 0 0 chr17 80429384 80429416 -14843235 + AT_rich Low_complexity Low_complexity 1 32 0 7 1198 363 151 323 73 chr17 80430002 80430166 -14842485 - B3 SINE B2 -11 205 1 7 1198 307 315 27 36 chr17 80430650 80430762 -14841889 - PB1 SINE Alu -3 124 14 7 1198 234 0 0 0 chr17 80430805 80430831 -14841820 + (TTA)n Simple_repeat Simple_repeat 2 27 0 7 1198 341 320 80 0 chr17 80430838 80430938 -14841713 - PB1D10 SINE Alu -9 108 1 7 1198 236 250 14 56 chr17 80431323 80431395 -14841256 + B1_Mur1 SINE Alu 68 136 -13 7 1198 289 284 33 49 chr17 80432499 80432621 -14840030 - PB1D7 SINE Alu 0 120 1 7 1198 229 271 100 0 chr17 80432775 80432845 -14839806 + B4A SINE B4 125 201 -91 7 1198 421 176 71 0 chr17 80432850 80432935 -14839716 + U6 snRNA snRNA 2 92 -15 7 1198 402 173 0 0 chr17 80432950 80433025 -14839626 + CT-rich Low_complexity Low_complexity 1 75 0 7 1198 736 158 0 0 chr17 80433025 80433145 -14839506 - B1_Mm SINE Alu -16 131 12 7 1198 307 175 16 0 chr17 80433091 80433154 -14839497 - B4A SINE B4 -142 150 87 7 1198 368 293 8 57 chr17 80433856 80433979 -14838672 - PB1D10 SINE Alu 0 117 1 7 1198 595 205 9 0 chr17 80433871 80433983 -14838668 - ID_B1 SINE B4 -34 190 78 7 1198 265 303 150 11 chr17 80433985 80434165 -14838486 - MER2 DNA MER2_type -120 225 21 7 1198 713 241 43 60 chr17 80434320 80434505 -14838146 + B3A SINE B2 11 192 -3 7 1198 1260 54 0 0 chr17 80435158 80435306 -14837345 - B1_Mus1 SINE Alu 0 148 1 7 1198 279 0 0 0 chr17 80435373 80435404 -14837247 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 7 1198 589 213 37 49 chr17 80435849 80436012 -14836639 + B3 SINE B2 56 216 0 7 1198 1061 139 66 47 chr17 80436101 80436313 -14836338 + B3 SINE B2 1 216 0 7 1198 1009 57 50 7 chr17 80436844 80436985 -14835666 + B1_Mus2 SINE Alu 1 147 0 7 1198 572 278 18 30 chr17 80437007 80437174 -14835477 + B3 SINE B2 50 214 -2 7 1198 357 330 50 36 chr17 80437363 80437636 -14835015 - MER47B DNA MER2_type -48 370 22 7 1198 420 133 0 0 chr17 80438241 80438316 -14834335 + L1_Mus2 LINE L1 6492 6566 0 7 1198 342 0 0 0 chr17 80438645 80438683 -14833968 + (TA)n Simple_repeat Simple_repeat 1 38 0 7 1198 201 121 0 0 chr17 80438762 80438795 -14833856 + (TATG)n Simple_repeat Simple_repeat 4 36 0 7 1198 301 244 202 0 chr17 80438808 80438927 -14833724 + B1F1 SINE Alu 1 143 -6 7 1198 549 202 17 26 chr17 80439098 80439215 -14833436 + PB1D9 SINE Alu 1 116 -4 7 1198 993 110 0 0 chr17 80439492 80439638 -14833013 - B1_Mus1 SINE Alu -2 146 1 7 1198 341 127 0 0 chr17 80439638 80439686 -14832965 - RSINE1 SINE B4 -113 52 5 7 1198 552 170 189 0 chr17 80439721 80439827 -14832824 + B3 SINE B2 4 129 -87 7 1198 421 283 39 101 chr17 80440096 80440304 -14832347 + B3A SINE B2 1 195 -3 7 1198 25 0 0 0 chr17 80440313 80440338 -14832313 + AT_rich Low_complexity Low_complexity 1 25 0 7 1198 310 225 0 111 chr17 80440987 80441077 -14831574 + B1_Mur1 SINE Alu 69 148 -1 7 1198 1455 58 5 21 chr17 80441323 80441516 -14831135 - B2_Mm2 SINE B2 -5 190 1 7 1198 21 0 0 0 chr17 80441904 80441925 -14830726 + AT_rich Low_complexity Low_complexity 1 21 0 7 1198 498 171 150 79 chr17 80442388 80442528 -14830123 + RSINE1 SINE B4 4 153 -12 7 1198 792 98 18 0 chr17 80442573 80442685 -14829966 - PB1D9 SINE Alu -6 114 1 7 1198 21 36 0 0 chr17 80442685 80442713 -14829938 + AT_rich Low_complexity Low_complexity 1 28 0 7 1198 946 188 22 17 chr17 80442834 80443013 -14829638 + B3 SINE B2 27 206 -10 7 1198 237 33 0 0 chr17 80443562 80443592 -14829059 + (CAAT)n Simple_repeat Simple_repeat 2 31 0 7 1198 424 215 99 36 chr17 80445493 80445604 -14827047 - PB1D7 SINE Alu -2 118 1 7 1198 21 71 0 0 chr17 80445766 80445808 -14826843 + AT_rich Low_complexity Low_complexity 1 42 0 7 1198 675 209 23 0 chr17 80445936 80446065 -14826586 + B1_Mus2 SINE Alu 2 133 -14 7 1198 1370 49 58 32 chr17 80448728 80448917 -14823734 - B2_Mm2 SINE B2 0 195 2 7 1198 269 277 135 21 chr17 80448918 80449014 -14823637 + PB1D9 SINE Alu 12 118 -2 7 1198 27 73 0 0 chr17 80449240 80449295 -14823356 + AT_rich Low_complexity Low_complexity 1 55 0 7 1198 671 171 16 0 chr17 80449380 80449509 -14823142 - URR1A DNA MER1_type -16 210 80 7 1198 650 215 44 12 chr17 80449556 80449716 -14822935 + B3 SINE B2 52 216 0 7 1198 250 296 25 92 chr17 80449719 80449731 -14822920 + MT2B LTR ERVL 153 156 -445 7 1198 747 225 0 0 chr17 80449731 80449873 -14822778 + B1_Mur1 SINE Alu 3 144 -5 7 1198 645 178 17 8 chr17 80450802 80450921 -14821730 + B1F2 SINE Alu 28 147 -2 7 1198 666 202 131 11 chr17 80451508 80451683 -14820968 + B3 SINE B2 6 201 -15 7 1198 802 175 35 0 chr17 80451836 80451979 -14820672 + B1F2 SINE Alu 1 148 -1 7 1198 230 319 29 105 chr17 80452293 80452314 -14820337 + ID SINE ID 1 52 -172 7 1198 240 246 29 103 chr17 80452314 80452382 -14820269 + ID4_ SINE ID 16 78 -5 7 1198 230 319 29 105 chr17 80452382 80452398 -14820253 + ID_B1 SINE B4 53 97 -127 7 1198 299 164 48 121 chr17 80452467 80452550 -14820101 + RSINE1 SINE B4 56 132 -33 7 1198 260 313 57 57 chr17 80452613 80452718 -14819933 + PB1D10 SINE Alu 13 117 0 7 1198 711 35 0 0 chr17 80453078 80453164 -14819487 + (GAAA)n Simple_repeat Simple_repeat 2 87 0 7 1198 264 153 403 0 chr17 80453261 80453333 -14819318 - B1_Mm SINE Alu -1 146 46 8 1198 1020 61 0 0 chr17 80454097 80454229 -14818422 + (GA)n Simple_repeat Simple_repeat 1 132 0 8 1198 243 234 32 138 chr17 80454252 80454346 -14818305 + RSINE1 SINE B4 15 98 -67 8 1198 1450 68 10 5 chr17 80454786 80454978 -14817673 - B2_Mm1t SINE B2 0 193 1 8 1198 287 163 169 34 chr17 80455188 80455277 -14817374 + L1MA5 LINE L1 6195 6295 -5 8 1198 342 122 0 0 chr17 80455474 80455523 -14817128 - B1F1 SINE Alu -9 140 92 8 1198 225 154 0 0 chr17 80455577 80455616 -14817035 + T-rich Low_complexity Low_complexity 1 39 0 8 1198 1129 69 14 0 chr17 80455616 80455761 -14816890 - B1_Mus2 SINE Alu 0 147 1 8 1198 619 263 134 0 chr17 80455900 80456086 -14816565 - ID_B1 SINE B4 -6 218 8 8 1198 329 253 38 0 chr17 80456972 80457051 -14815600 - ID_B1 SINE B4 -29 195 114 8 1198 237 327 93 0 chr17 80457068 80457175 -14815476 - PB1D10 SINE Alu 0 117 1 8 1198 274 313 40 20 chr17 80457179 80457280 -14815371 - PB1 SINE Alu -1 126 24 8 1198 751 202 179 5 chr17 80457431 80457615 -14815036 + B3 SINE B2 1 216 0 8 1198 362 151 96 0 chr17 80457631 80457704 -14814947 + PB1D9 SINE Alu 34 113 -7 8 1198 264 214 18 18 chr17 80457916 80457973 -14814678 + C-rich Low_complexity Low_complexity 1 57 0 8 1198 1330 66 27 27 chr17 80458465 80458652 -14813999 - B2_Mm2 SINE B2 -7 188 2 8 1198 634 75 55 36 chr17 80458673 80458783 -14813868 + B2_Mm2 SINE B2 74 185 -10 8 1198 297 266 174 61 chr17 80459000 80459013 -14813638 - RSINE1 SINE B4 -6 159 148 8 1198 240 35 0 0 chr17 80459013 80459042 -14813609 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 1198 228 35 0 0 chr17 80459042 80459070 -14813581 + (TA)n Simple_repeat Simple_repeat 1 29 0 8 1198 198 0 0 0 chr17 80459072 80459094 -14813557 + (TG)n Simple_repeat Simple_repeat 1 22 0 8 1198 297 266 174 61 chr17 80459094 80459208 -14813443 - RSINE1 SINE B4 -18 147 14 8 1198 210 213 37 85 chr17 80459139 80459221 -14813430 - B3A SINE B2 -118 80 3 8 1198 350 361 11 78 chr17 80459770 80459950 -14812701 + B3A SINE B2 1 168 -30 8 1198 22 0 0 0 chr17 80460747 80460769 -14811882 + GC_rich Low_complexity Low_complexity 1 22 0 8 1198 354 262 0 0 chr17 80461020 80461169 -14811482 + (CCG)n Simple_repeat Simple_repeat 3 151 0 8 1198 195 42 0 0 chr17 80461305 80461329 -14811322 + (GGA)n Simple_repeat Simple_repeat 1 24 0 8 1198 247 170 21 0 chr17 80463302 80463349 -14809302 + RMER21A LTR ERV1 94 141 -806 8 1198 2253 171 54 28 chr17 80463370 80463870 -14808781 + RMER21A LTR ERV1 417 929 -18 8 1198 249 138 103 0 chr17 80463879 80463937 -14808714 + B3 SINE B2 147 210 -6 8 1198 218 280 39 39 chr17 80464019 80464097 -14808554 - B1_Mm SINE Alu -47 100 23 8 1198 23 0 0 0 chr17 80464308 80464331 -14808320 + AT_rich Low_complexity Low_complexity 1 23 0 8 1198 715 172 59 7 chr17 80464381 80464516 -14808135 + B1_Mur4 SINE Alu 9 150 0 8 1198 1017 140 0 26 chr17 80465086 80465240 -14807411 - B1_Mur4 SINE Alu 0 150 1 8 1198 217 217 67 67 chr17 80465535 80465624 -14807027 + PB1D7 SINE Alu 24 112 -8 8 1198 750 193 14 0 chr17 80466125 80466265 -14806386 - B1_Mur3 SINE Alu -1 148 7 8 1198 304 41 20 39 chr17 80466937 80466988 -14805663 + (CCCCCT)n Simple_repeat Simple_repeat 6 55 0 8 1198 272 232 0 0 chr17 80466990 80467046 -14805605 - URR1B DNA MER1_type -164 61 6 8 1198 240 0 75 0 chr17 80467107 80467147 -14805504 + (TA)n Simple_repeat Simple_repeat 1 43 0 8 1198 237 317 28 57 chr17 80467217 80467394 -14805257 - MER3 DNA MER1_type 0 209 38 8 1198 283 242 11 21 chr17 80467529 80467622 -14805029 + ID_B1 SINE B4 2 93 -131 8 1198 231 239 45 0 chr17 80468219 80468286 -14804365 + (TAAA)n Simple_repeat Simple_repeat 1 70 0 8 1198 195 42 0 0 chr17 80468369 80468393 -14804258 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 8 1198 641 205 164 95 chr17 80468394 80468583 -14804068 - B3 SINE B2 -14 202 1 8 1198 792 112 0 0 chr17 80468660 80468776 -14803875 + B1_Mus2 SINE Alu 20 135 -12 8 1198 522 0 0 0 chr17 80468776 80468834 -14803817 + (CAAAA)n Simple_repeat Simple_repeat 4 61 0 8 1198 381 258 65 0 chr17 80468861 80468954 -14803697 + RSINE1 SINE B4 35 133 -32 8 1198 318 50 0 0 chr17 80468962 80469002 -14803649 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 1198 1185 55 0 14 chr17 80469236 80469383 -14803268 - B1_Mus2 SINE Alu -1 146 2 8 1198 652 91 0 0 chr17 80469603 80469702 -14802949 - L1_Mus2 LINE L1 0 6566 6468 8 1198 625 204 14 14 chr17 80469728 80469867 -14802784 - B1F SINE Alu -2 147 9 8 1198 488 284 6 31 chr17 80469867 80469888 -14802763 - ID_B1 SINE B4 0 224 69 8 1198 767 209 0 0 chr17 80469998 80470137 -14802514 + B1_Mur2 SINE Alu 6 144 -5 8 1198 567 0 0 0 chr17 80470162 80470225 -14802426 + (AATAG)n Simple_repeat Simple_repeat 5 67 0 8 1198 703 167 79 8 chr17 80470229 80470356 -14802295 + B1_Mur2 SINE Alu 10 145 -4 8 1198 360 0 0 0 chr17 80470932 80470972 -14801679 + (TTGG)n Simple_repeat Simple_repeat 3 42 0 8 1198 563 246 48 0 chr17 80470991 80471117 -14801534 - ID_B1 SINE B4 -6 218 87 8 1198 1792 262 25 20 chr17 80471139 80471189 -14801462 - Lx6 LINE L1 -27 7433 7384 8 1198 423 0 0 0 chr17 80471189 80471236 -14801415 + (TC)n Simple_repeat Simple_repeat 1 47 0 8 1198 6834 84 27 3 chr17 80471241 80472180 -14800471 - Lx2 LINE L1 -16 6981 6021 8 1198 1792 262 25 20 chr17 80472180 80472567 -14800084 - Lx6 LINE L1 -80 7380 6988 8 1198 308 115 79 32 chr17 80472669 80472732 -14799919 + MLT1J LTR MaLR 99 164 -348 8 1198 635 193 1 13 chr17 80473180 80473322 -14799329 + B1_Mur1 SINE Alu 4 141 -8 8 1198 707 257 77 20 chr17 80473344 80473539 -14799112 + B3 SINE B2 5 210 -6 8 1198 2302 219 34 32 chr17 80473614 80474216 -14798435 - RLTR20A2 LTR ERVK 0 578 1 8 1198 198 245 75 0 chr17 80474507 80474560 -14798091 + L2c LINE L2 3304 3360 -27 8 1198 441 319 18 0 chr17 80474576 80474689 -14797962 + B1F SINE Alu 1 115 -34 8 1198 228 170 0 0 chr17 80474690 80474743 -14797908 + GA-rich Low_complexity Low_complexity 1 53 0 8 1198 899 256 10 0 chr17 80475013 80475220 -14797431 - B3 SINE B2 -7 209 1 8 1198 1169 61 0 7 chr17 80475402 80475551 -14797100 - B1_Mus1 SINE Alu 0 148 1 8 1198 1054 139 202 0 chr17 80475561 80475734 -14796917 - B3 SINE B2 -6 210 3 8 1198 315 146 0 0 chr17 80475766 80475821 -14796830 + (TCCC)n Simple_repeat Simple_repeat 2 56 0 8 1198 288 0 0 0 chr17 80475821 80475853 -14796798 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 1198 291 312 157 56 chr17 80475866 80476063 -14796588 - MER20 DNA MER1_type 0 219 3 8 1198 960 25 0 0 chr17 80476065 80476185 -14796466 + ORR1A2 LTR MaLR 122 241 -86 8 1198 1594 217 72 8 chr17 80476524 80476910 -14795741 + MTD LTR MaLR 1 411 -8 8 1198 1803 185 29 66 chr17 80477197 80477725 -14794926 + RLTR31A_Mm LTR ERVK 1 561 0 8 1199 612 261 111 22 chr17 80478945 80479125 -14793526 + ID_B1 SINE B4 3 198 -26 8 1199 1117 101 61 50 chr17 80479432 80479630 -14793021 + RMER6B LTR ERVK 3 202 -259 8 1199 1079 193 109 35 chr17 80479633 80479917 -14792734 - RMER19C LTR ERVK 0 611 307 8 1199 324 154 326 11 chr17 80479919 80480011 -14792640 - RMER19B LTR ERVK -473 429 309 8 1199 1174 178 59 0 chr17 80480043 80480279 -14792372 + RMER6B LTR ERVK 206 455 -6 8 1199 392 235 0 84 chr17 80480594 80480701 -14791950 + MT2B LTR ERVL 157 254 -347 8 1199 855 145 7 0 chr17 80480611 80480749 -14791902 + B1_Mus2 SINE Alu 9 147 0 8 1199 333 0 0 0 chr17 80480763 80480800 -14791851 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 1199 454 226 0 0 chr17 80481012 80481105 -14791546 - BC1_Mm scRNA scRNA -57 95 3 8 1199 823 177 0 33 chr17 80481126 80481278 -14791373 - B1_Mur2 SINE Alu -2 147 1 8 1199 619 234 14 28 chr17 80481776 80481921 -14790730 - B1_Mur1 SINE Alu -5 144 2 8 1199 219 69 0 0 chr17 80481928 80481957 -14790694 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 8 1199 835 156 0 29 chr17 80481957 80482096 -14790555 - B1_Mus1 SINE Alu -12 136 2 8 1199 508 235 84 0 chr17 80482356 80482475 -14790176 + B1_Mur1 SINE Alu 2 130 -19 8 1199 271 297 0 0 chr17 80482476 80482540 -14790111 - B3A SINE B2 -117 81 18 8 1199 753 73 0 0 chr17 80482541 80482650 -14790001 + (TC)n Simple_repeat Simple_repeat 1 109 0 8 1199 185 0 40 0 chr17 80483182 80483207 -14789444 + (TTG)n Simple_repeat Simple_repeat 2 27 0 8 1199 695 167 20 27 chr17 80483210 80483358 -14789293 - B1_Mur2 SINE Alu 0 149 3 8 1199 746 154 79 14 chr17 80484469 80484615 -14788036 - B1_Mus2 SINE Alu -1 146 1 8 1199 852 214 138 14 chr17 80484648 80484923 -14787728 - ORR1D1 LTR MaLR -65 309 1 8 1199 497 241 61 68 chr17 80485223 80485370 -14787281 - B3A SINE B2 -27 171 26 8 1199 590 202 57 40 chr17 80485421 80485545 -14787106 + B1_Mur1 SINE Alu 1 126 -23 8 1199 483 196 35 18 chr17 80485780 80485894 -14786757 + B1_Mus2 SINE Alu 6 121 -26 8 1199 642 186 244 23 chr17 80486662 80486838 -14785813 + B3 SINE B2 2 216 0 8 1199 917 26 0 0 chr17 80486844 80486961 -14785690 + B1_Mus1 SINE Alu 32 148 0 8 1199 29 0 0 0 chr17 80486961 80486990 -14785661 + AT_rich Low_complexity Low_complexity 1 29 0 8 1199 1522 58 0 5 chr17 80487027 80487217 -14785434 - B2_Mm2 SINE B2 -6 189 1 8 1199 244 203 24 129 chr17 80487707 80487792 -14784859 + ID4_ SINE ID 4 79 -4 9 1199 569 116 21 0 chr17 80488172 80488267 -14784384 + (GAAA)n Simple_repeat Simple_repeat 3 99 0 9 1199 1326 0 35 0 chr17 80488455 80488629 -14784022 + (TTC)n Simple_repeat Simple_repeat 1 180 0 9 1199 297 256 0 0 chr17 80488629 80488711 -14783940 + T-rich Low_complexity Low_complexity 1 82 0 9 1199 859 117 0 30 chr17 80488714 80488881 -14783770 + (TCC)n Simple_repeat Simple_repeat 3 164 0 9 1199 388 235 31 0 chr17 80488969 80489067 -14783584 + B1F SINE Alu 44 144 -5 9 1199 211 54 0 51 chr17 80489091 80489130 -14783521 + (GGA)n Simple_repeat Simple_repeat 1 37 0 9 1199 235 304 14 0 chr17 80489134 80489203 -14783448 + ID4 SINE ID 5 74 -9 9 1199 282 290 75 0 chr17 80490062 80490169 -14782482 - MLT1D LTR MaLR -16 489 375 9 1199 278 106 0 21 chr17 80490207 80490255 -14782396 + (TCCC)n Simple_repeat Simple_repeat 4 50 0 9 1199 266 281 148 18 chr17 80490274 80490396 -14782255 - B1F2 SINE Alu -3 147 8 9 1199 218 156 0 22 chr17 80490574 80490620 -14782031 + (TA)n Simple_repeat Simple_repeat 1 45 0 9 1199 1883 215 31 22 chr17 80490627 80491083 -14781568 - Lx9 LINE L1 -128 7516 7057 9 1199 261 0 0 0 chr17 80491612 80491641 -14781010 + (A)n Simple_repeat Simple_repeat 1 29 0 9 1199 24 0 0 0 chr17 80492404 80492428 -14780223 + AT_rich Low_complexity Low_complexity 1 24 0 9 1199 903 172 161 0 chr17 80492428 80492608 -14780043 - B3 SINE B2 -7 209 1 9 1199 322 306 62 9 chr17 80492675 80492787 -14779864 - PB1D9 SINE Alu -1 119 2 9 1199 1113 172 14 173 chr17 80492857 80493152 -14779499 + RMER19B LTR ERVK 1 248 -654 9 1199 388 301 60 56 chr17 80493301 80493551 -14779100 - RLTR16 LTR ERVK -254 251 1 9 1199 246 307 0 51 chr17 80493906 80493983 -14778668 + RSINE1 SINE B4 8 80 -85 9 1199 2157 129 108 3 chr17 80493983 80494363 -14778288 - MTC LTR MaLR 0 421 2 9 1199 218 105 26 0 chr17 80494484 80494522 -14778129 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 9 1199 362 175 0 0 chr17 80494551 80494614 -14778037 + B2_Mm2 SINE B2 2 64 -131 9 1199 1604 170 25 49 chr17 80494700 80495154 -14777497 + RMER17C LTR ERVK 16 435 -523 9 1199 829 183 62 36 chr17 80495162 80495355 -14777296 + RMER17C-int LTR ERVK 1 198 -3040 9 1199 914 205 154 42 chr17 80496484 80496917 -14775734 + RMER17C-int LTR ERVK 1508 1988 -1250 9 1199 993 136 24 6 chr17 80496916 80497086 -14775565 + RMER17C-int LTR ERVK 2164 2336 -902 9 1199 363 132 207 46 chr17 80497098 80497185 -14775466 + RMER17C-int LTR ERVK 2533 2633 -605 9 1199 2112 142 15 9 chr17 80497223 80497565 -14775086 + RMER17C-int LTR ERVK 2895 3238 0 9 1199 1598 175 44 22 chr17 80497568 80498003 -14774648 + RMER17C LTR ERVK 16 439 -519 9 1199 266 269 0 0 chr17 80498559 80498629 -14774022 + ID_B1 SINE B4 88 153 -71 9 1199 261 272 173 0 chr17 80498572 80498653 -14773998 + PB1D10 SINE Alu 16 110 -7 9 1199 2191 174 35 21 chr17 80498688 80499123 -14773528 - RMER10A LTR ERVL 0 442 2 9 1199 833 187 151 16 chr17 80499725 80499910 -14772741 - B3 SINE B2 -6 210 1 9 1199 4290 103 97 23 chr17 80500012 80500287 -14772364 + RMER6A LTR ERVK 1 322 -434 1 1199 352 0 42 0 chr17 80500287 80500335 -14772316 + (GA)n Simple_repeat Simple_repeat 2 51 0 2 1199 4290 103 97 23 chr17 80500335 80500763 -14771888 + RMER6A LTR ERVK 323 755 -1 1 1199 252 288 0 0 chr17 80500764 80500823 -14771828 - B3A SINE B2 -72 126 68 3 1199 1291 14 0 7 chr17 80500853 80501001 -14771650 - B1_Mm SINE Alu 0 147 1 4 1199 904 85 0 8 chr17 80501246 80501377 -14771274 + B1_Mus1 SINE Alu 6 135 -13 5 1199 387 0 0 0 chr17 80501377 80501420 -14771231 + (CAAAA)n Simple_repeat Simple_repeat 1 43 0 6 1199 857 186 7 7 chr17 80501502 80501648 -14771003 - B1_Mur3 SINE Alu -3 146 1 7 1199 662 248 6 36 chr17 80501690 80501857 -14770794 - ID_B1 SINE B4 -62 162 1 8 1199 898 260 24 0 chr17 80502703 80502911 -14769740 - ID_B1 SINE B4 -9 215 3 9 1199 238 98 24 0 chr17 80503253 80503294 -14769357 - MT2A LTR ERVL -2 531 490 1 1199 432 0 0 0 chr17 80503294 80503342 -14769309 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 1 1199 232 121 17 33 chr17 80503357 80503417 -14769234 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1 1199 890 152 14 7 chr17 80503434 80503580 -14769071 + B1_Mur3 SINE Alu 1 147 -2 1 1199 953 248 52 89 chr17 80503634 80503972 -14768679 - MT2A LTR ERVL -65 536 82 1 1199 1091 128 48 43 chr17 80503972 80504160 -14768491 + B2_Mm2 SINE B2 2 190 -5 1 1199 953 227 71 103 chr17 80504160 80504238 -14768413 - MT2A LTR ERVL -452 81 3 1 1199 295 172 0 0 chr17 80504309 80504367 -14768284 + U6 snRNA snRNA 35 92 -15 1 1199 22 35 0 0 chr17 80504367 80504396 -14768255 + AT_rich Low_complexity Low_complexity 1 29 0 1 1199 410 0 20 0 chr17 80504445 80504495 -14768156 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 1 1199 481 181 295 0 chr17 80504497 80504602 -14768049 - B1_Mus1 SINE Alu -12 136 1 1 1199 37 39 0 0 chr17 80504610 80504661 -14767990 + AT_rich Low_complexity Low_complexity 1 51 0 1 1199 840 221 66 15 chr17 80504672 80504870 -14767781 - B3 SINE B2 -1 215 8 2 1199 515 83 16 0 chr17 80504905 80505001 -14767650 - B1_Mm SINE Alu 0 149 52 2 1199 534 43 0 0 chr17 80505111 80505180 -14767471 + (TC)n Simple_repeat Simple_repeat 2 70 0 2 1199 205 194 0 0 chr17 80505517 80505553 -14767098 + MIR SINE MIR 109 144 -64 2 1199 367 286 71 8 chr17 80505778 80505905 -14766746 + MER5A DNA MER1_type 55 189 0 2 1199 283 237 66 0 chr17 80505996 80506072 -14766579 + MER21B LTR ERV1 26 106 -757 2 1199 255 225 132 83 chr17 80506072 80506193 -14766458 - RLTR13D3 LTR ERVK 0 1114 988 2 1199 243 167 0 0 chr17 80506487 80506529 -14766122 - B2_Mm2 SINE B2 -153 42 1 2 1199 832 166 7 7 chr17 80507118 80507264 -14765387 + B1_Mur4 SINE Alu 4 149 -1 2 1199 2061 152 39 60 chr17 80507292 80507678 -14764973 - ORR1C1 LTR MaLR 0 378 1 2 1199 473 304 29 29 chr17 80507678 80507851 -14764800 + MER21B LTR ERV1 200 372 -491 2 1199 1126 275 72 33 chr17 80507851 80508084 -14764567 + MTEa LTR MaLR 1 229 -150 3 1199 2527 122 53 10 chr17 80508084 80508482 -14764169 - MTC LTR MaLR -2 419 5 3 1199 1126 275 72 33 chr17 80508482 80508609 -14764042 + MTEa LTR MaLR 230 374 -5 3 1199 739 316 130 13 chr17 80508614 80508922 -14763729 + MER21B LTR ERV1 369 712 -151 2 1199 235 74 93 0 chr17 80508947 80509001 -14763650 - B2_Mm2 SINE B2 0 195 137 3 1199 1176 99 46 6 chr17 80509038 80509211 -14763440 - B2_Mm2 SINE B2 -14 181 2 3 1199 935 134 0 7 chr17 80509215 80509358 -14763293 - B1_Mur3 SINE Alu -2 147 6 3 1199 810 194 106 77 chr17 80509435 80509642 -14763009 + B3 SINE B2 4 216 0 3 1199 1409 234 42 17 chr17 80509688 80509769 -14762882 + ORR1D2 LTR MaLR 1 80 -290 3 1199 3274 34 31 0 chr17 80509769 80510153 -14762498 + MTA_Mm LTR MaLR 1 396 0 3 1199 1409 234 42 17 chr17 80510153 80510432 -14762219 + ORR1D2 LTR MaLR 81 370 0 3 1199 437 284 10 0 chr17 80510507 80510609 -14762042 + ID_B1 SINE B4 85 187 -37 3 1199 3008 136 59 4 chr17 80510764 80511237 -14761414 - RLTR19 LTR ERVK 0 499 1 3 1199 1075 108 0 7 chr17 80511400 80511549 -14761102 + B1_Mus1 SINE Alu 1 148 0 4 1199 1386 28 0 16 chr17 80511558 80511740 -14760911 + (TAGA)n Simple_repeat Simple_repeat 1 179 0 4 1199 510 276 58 17 chr17 80511754 80511927 -14760724 - B3 SINE B2 -34 182 3 4 1199 207 0 0 0 chr17 80512038 80512061 -14760590 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1199 479 193 8 92 chr17 80512061 80512181 -14760470 - B1_Mur3 SINE Alu 0 120 11 4 1199 637 254 0 0 chr17 80513069 80513207 -14759444 + B1_Mur2 SINE Alu 6 143 -6 4 1199 1489 58 0 31 chr17 80513215 80513398 -14759253 + B2_Mm2 SINE B2 1 181 -14 4 1199 684 36 0 0 chr17 80513398 80513481 -14759170 + (GAAA)n Simple_repeat Simple_repeat 2 84 0 4 1199 865 147 28 7 chr17 80513527 80513671 -14758980 - B1_Mus2 SINE Alu 0 147 1 4 1199 5253 40 3 0 chr17 80513681 80514301 -14758350 - L1Md_T LINE L1 -1 6581 5960 4 1199 434 297 63 23 chr17 80514306 80514548 -14758103 - MLT1A1 LTR MaLR -58 350 51 5 1199 216 0 0 0 chr17 80514723 80514747 -14757904 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1199 1012 98 21 0 chr17 80515100 80515243 -14757408 + B1_Mur4 SINE Alu 1 146 -4 5 1199 215 31 31 0 chr17 80515243 80515275 -14757376 + (CAA)n Simple_repeat Simple_repeat 1 33 0 5 1199 195 129 0 0 chr17 80516271 80516302 -14756349 + (GA)n Simple_repeat Simple_repeat 2 32 0 5 1199 296 287 96 20 chr17 80516571 80516717 -14755934 - RMER2 LTR ERV1 0 567 411 5 1199 1932 90 21 40 chr17 80516764 80517089 -14755562 + ORR1A2 LTR MaLR 1 319 -8 5 1199 496 276 0 0 chr17 80517369 80517492 -14755159 + ID_B1 SINE B4 93 215 -9 5 1199 348 280 44 36 chr17 80517492 80517506 -14755145 + B1F1 SINE Alu 12 149 0 5 1199 673 147 85 35 chr17 80517571 80517712 -14754939 + B1_Mur4 SINE Alu 3 150 0 5 1199 800 202 62 6 chr17 80517736 80517915 -14754736 + B3 SINE B2 27 215 -1 6 1199 743 126 0 15 chr17 80518074 80518116 -14754535 + (GGA)n Simple_repeat Simple_repeat 3 44 0 6 1199 1053 150 0 0 chr17 80518116 80518296 -14754355 + (GAA)n Simple_repeat Simple_repeat 1 180 0 6 1199 743 126 0 15 chr17 80518296 80518390 -14754261 + (GGA)n Simple_repeat Simple_repeat 3 95 0 6 1199 303 28 0 0 chr17 80519116 80519152 -14753499 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 1199 217 122 98 0 chr17 80519156 80519197 -14753454 - B1_Mur4 SINE Alu -7 143 99 6 1199 1959 151 112 0 chr17 80519238 80519623 -14753028 + RLTR21 LTR ERVK 9 436 -1136 6 1199 414 0 0 0 chr17 80519623 80519669 -14752982 + (TTTA)n Simple_repeat Simple_repeat 1 46 0 6 1199 1172 75 0 0 chr17 80519669 80519830 -14752821 - B2_Mm2 SINE B2 -34 161 1 6 1199 3793 151 23 28 chr17 80519830 80520643 -14752008 + RLTR21 LTR ERVK 425 1260 -144 6 1199 672 36 0 0 chr17 80520647 80520730 -14751921 + (TATG)n Simple_repeat Simple_repeat 4 86 0 6 1199 924 156 0 0 chr17 80520787 80521149 -14751502 + (TG)n Simple_repeat Simple_repeat 1 362 0 7 1199 268 119 24 0 chr17 80521352 80521394 -14751257 + RLTR21 LTR ERVK 1530 1572 0 6 1199 215 318 0 16 chr17 80521542 80521606 -14751045 + L2c LINE L2 3288 3350 -37 7 1199 376 19 38 0 chr17 80521904 80521957 -14750694 + (TG)n Simple_repeat Simple_repeat 1 55 0 7 1199 350 256 13 0 chr17 80522005 80522083 -14750568 + Lx9 LINE L1 7203 7281 -363 7 1199 1225 166 90 45 chr17 80522106 80522293 -14750358 - RMER17C LTR ERVK 0 410 220 7 1199 994 92 0 13 chr17 80522293 80522447 -14750204 + (GAGAA)n Simple_repeat Simple_repeat 5 156 0 7 1199 1225 164 17 65 chr17 80522447 80522692 -14749959 - RMER17C LTR ERVK -574 384 16 7 1199 580 255 149 41 chr17 80522692 80523004 -14749647 + Lx9 LINE L1 7175 7599 -45 7 1199 222 208 0 0 chr17 80523089 80523137 -14749514 + GA-rich Low_complexity Low_complexity 1 48 0 7 1199 248 0 31 0 chr17 80523399 80523431 -14749220 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 7 1199 1237 41 7 0 chr17 80523436 80523583 -14749068 - B1_Mus1 SINE Alu 0 148 1 7 1199 2266 89 92 23 chr17 80523619 80524004 -14748647 + RLTR11B LTR ERVK 1 412 -41 8 1199 337 159 13 80 chr17 80524004 80524079 -14748572 - RLTR23 LTR ERV1 0 430 361 8 1199 836 0 261 0 chr17 80524084 80524195 -14748456 + B1_Mm SINE Alu 2 141 -6 8 1199 1241 142 84 182 chr17 80524247 80524327 -14748324 - RLTR23 LTR ERV1 -43 387 313 8 1199 2676 114 50 7 chr17 80524327 80524750 -14747901 + BGLII_B LTR ERVK 1 441 0 8 1199 1241 142 84 182 chr17 80524750 80524982 -14747669 - RLTR23 LTR ERV1 -118 312 101 8 1199 207 88 0 0 chr17 80524982 80525016 -14747635 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 8 1199 1241 142 84 182 chr17 80525016 80525131 -14747520 - RLTR23 LTR ERV1 -330 100 1 8 1199 276 125 0 0 chr17 80525131 80525179 -14747472 + RLTR11B LTR ERVK 406 453 0 8 1199 1259 6 25 0 chr17 80526505 80526665 -14745986 + (GA)n Simple_repeat Simple_repeat 1 164 0 8 1199 269 86 56 14 chr17 80527876 80527947 -14744704 + T-rich Low_complexity Low_complexity 2 75 0 8 1199 861 196 112 29 chr17 80529294 80529499 -14743152 + URR1A DNA MER1_type 3 224 -2 8 1199 3817 18 2 2 chr17 80529619 80530055 -14742596 + L1Md_F2 LINE L1 6132 6567 -15 8 1199 783 177 0 26 chr17 80530326 80530468 -14742183 + B1_Mur3 SINE Alu 2 139 -10 8 1199 207 0 0 0 chr17 80530468 80530491 -14742160 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9 1199 344 176 14 14 chr17 80530509 80530578 -14742073 + B1_Mur2 SINE Alu 65 133 -16 9 1199 542 220 114 0 chr17 80530593 80530725 -14741926 + RSINE1 SINE B4 12 158 -7 9 1199 698 230 86 43 chr17 80531389 80531598 -14741053 + ID_B1 SINE B4 5 222 -2 9 1199 252 0 0 0 chr17 80532694 80532722 -14739929 + (TTG)n Simple_repeat Simple_repeat 3 30 0 9 1199 373 73 357 9 chr17 80533241 80533350 -14739301 - B2_Mm2 SINE B2 -2 193 47 9 1199 1165 120 17 0 chr17 80533364 80533539 -14739112 - B2_Mm1t SINE B2 -15 178 1 9 1199 216 308 128 32 chr17 80533964 80534058 -14738593 + PB1D7 SINE Alu 18 120 0 9 1199 583 290 21 9 chr17 80534058 80534256 -14738395 + B3A SINE B2 7 210 -6 9 1199 448 241 43 181 chr17 80534286 80534590 -14738061 + MER2 DNA MER2_type 84 345 0 9 1199 217 349 32 0 chr17 80534706 80534832 -14737819 + MIR SINE MIR 132 261 -1 1 1199 756 160 15 0 chr17 80535085 80535216 -14737435 - B1_Mus2 SINE Alu -10 137 5 1 1199 449 205 69 0 chr17 80535545 80535689 -14736962 + ID_B1 SINE B4 1 224 0 1 1199 555 291 7 7 chr17 80535760 80535902 -14736749 + B1F1 SINE Alu 3 144 -5 1 1199 27 0 0 0 chr17 80535903 80535930 -14736721 + GC_rich Low_complexity Low_complexity 1 27 0 1 1199 284 277 24 0 chr17 80536094 80536177 -14736474 + MER53 DNA hAT 108 192 -1 1 1199 536 174 178 49 chr17 80536250 80536413 -14736238 + B3 SINE B2 30 213 -3 1 1199 270 56 0 0 chr17 80536453 80536489 -14736162 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1199 514 275 42 0 chr17 80536491 80536633 -14736018 - B3A SINE B2 -50 148 1 1 1199 784 281 9 47 chr17 80536693 80536906 -14735745 + B3 SINE B2 4 208 -8 1 1199 374 243 8 112 chr17 80536950 80537075 -14735576 - RSINE1 SINE B4 -34 131 20 1 1199 219 292 111 0 chr17 80537144 80537216 -14735435 + B1F SINE Alu 16 95 -54 1 1199 370 298 0 26 chr17 80538653 80538770 -14733881 - ID_B1 SINE B4 -5 219 106 1 1199 450 0 0 0 chr17 80538772 80538822 -14733829 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1199 1417 62 17 0 chr17 80538825 80539001 -14733650 - B2_Mm2 SINE B2 -15 180 2 1 1199 252 0 0 0 chr17 80539003 80539031 -14733620 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1 1199 458 45 0 43 chr17 80539053 80539123 -14733528 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 1199 706 215 13 7 chr17 80539132 80539282 -14733369 - B3A SINE B2 -46 152 2 1 1199 288 234 24 47 chr17 80539288 80539373 -14733278 - ID_B1 SINE B4 -134 90 8 1 1199 227 298 25 50 chr17 80539382 80539502 -14733149 - MLT1A LTR MaLR 0 408 292 1 1199 245 316 41 58 chr17 80539653 80539774 -14732877 - MLT1A LTR MaLR -255 119 1 1 1199 223 311 11 0 chr17 80540486 80540576 -14732075 + (TG)n Simple_repeat Simple_repeat 1 91 0 1 1199 295 336 27 0 chr17 80540604 80540714 -14731937 - RSINE1 SINE B4 -2 163 51 1 1199 966 159 105 25 chr17 80540778 80540978 -14731673 - B3 SINE B2 0 216 1 1 1199 231 257 110 41 chr17 80541182 80541255 -14731396 + 4.5SRNA scRNA scRNA 1 78 -16 1 1199 681 68 90 120 chr17 80541310 80541443 -14731208 - B1_Mus1 SINE Alu -12 136 8 1 1199 387 0 0 0 chr17 80541453 80541496 -14731155 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 1 1199 1048 98 24 6 chr17 80541497 80541661 -14730990 - B2_Mm2 SINE B2 -28 167 1 1 1199 436 290 37 74 chr17 80541702 80541733 -14730918 + B3A SINE B2 16 42 -156 1 1199 900 158 0 7 chr17 80541733 80541880 -14730771 + B1_Mur3 SINE Alu 4 149 0 1 1199 436 290 37 74 chr17 80541880 80542038 -14730613 + B3A SINE B2 43 198 0 1 1199 873 154 17 6 chr17 80542527 80542687 -14729964 + CT-rich Low_complexity Low_complexity 17 179 0 1 1199 797 171 13 27 chr17 80542687 80542700 -14729951 - B1_Mus1 SINE Alu 0 148 137 1 1199 288 0 0 0 chr17 80542700 80542732 -14729919 + (CTTG)n Simple_repeat Simple_repeat 3 34 0 1 1199 797 171 13 27 chr17 80542732 80542868 -14729783 - B1_Mus1 SINE Alu -12 136 1 1 1199 873 154 17 6 chr17 80542868 80542883 -14729768 + polypyrimidine Low_complexity Low_complexity 2 16 0 1 1199 306 0 0 0 chr17 80543170 80543204 -14729447 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1 1199 313 183 17 0 chr17 80543414 80543474 -14729177 + ID4 SINE ID 1 61 -22 1 1199 828 275 23 5 chr17 80543540 80543759 -14728892 - ID_B1 SINE B4 -1 223 1 1 1199 852 149 13 20 chr17 80543841 80543982 -14728669 + B1_Mur4 SINE Alu 1 141 -9 1 1199 279 0 0 0 chr17 80543982 80544013 -14728638 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1199 202 146 0 24 chr17 80544025 80544067 -14728584 + A-rich Low_complexity Low_complexity 2 42 0 1 1199 415 237 10 58 chr17 80545701 80545804 -14726847 - PB1D7 SINE Alu -19 98 1 1 1199 574 291 48 61 chr17 80546075 80546118 -14726533 - MLT1L LTR MaLR -145 465 427 1 1199 1522 194 91 26 chr17 80546118 80546468 -14726183 - ORR1D1 LTR MaLR 0 374 2 1 1199 574 291 48 61 chr17 80546468 80546717 -14725934 - MLT1L LTR MaLR -184 426 177 1 1199 250 342 16 16 chr17 80547442 80547564 -14725087 + L1ME2 LINE L1 5857 5978 -186 1 1199 298 224 58 41 chr17 80548020 80548141 -14724510 - MER20 DNA MER1_type -1 218 96 1 1199 513 226 121 0 chr17 80548783 80548907 -14723744 - RSINE1 SINE B4 -16 149 11 1 1199 759 174 7 92 chr17 80549054 80549075 -14723576 + B1_Mur2 SINE Alu 1 13 -136 1 1199 207 0 0 0 chr17 80549075 80549098 -14723553 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1199 1156 58 0 0 chr17 80549100 80549238 -14723413 - B1_Mus1 SINE Alu -10 138 1 1 1199 759 174 7 92 chr17 80549238 80549365 -14723286 + B1_Mur2 SINE Alu 14 139 -10 1 1199 318 283 90 28 chr17 80549606 80549784 -14722867 + L1MD3 LINE L1 7794 7982 -13 1 1199 378 0 0 0 chr17 80549841 80549883 -14722768 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1199 859 175 50 35 chr17 80549952 80550153 -14722498 - ORR1D1 LTR MaLR 0 374 171 1 1199 903 144 19 8 chr17 80550155 80550430 -14722221 + GA-rich Low_complexity Low_complexity 1 278 0 1 1199 890 189 4 0 chr17 80550458 80550719 -14721932 + GA-rich Low_complexity Low_complexity 1 261 0 1 1199 779 186 34 17 chr17 80550732 80550907 -14721744 - ORR1D1 LTR MaLR -192 182 5 1 1199 554 248 52 39 chr17 80550920 80551075 -14721576 + RSINE1 SINE B4 2 158 -7 1 1199 420 230 44 9 chr17 80551233 80551347 -14721304 + PB1D9 SINE Alu 2 119 -1 1 1199 836 200 194 0 chr17 80551631 80551811 -14720840 - B3 SINE B2 0 216 2 1 1199 712 122 81 8 chr17 80551929 80552053 -14720598 + B1_Mur3 SINE Alu 9 141 -8 1 1199 587 268 0 106 chr17 80553225 80553442 -14719209 + B3A SINE B2 3 196 -2 1 1199 304 132 44 0 chr17 80553590 80553658 -14718993 - B1_Mus2 SINE Alu 0 147 77 1 1199 430 260 14 86 chr17 80553664 80553803 -14718848 + B3A SINE B2 55 183 -15 1 1199 219 88 0 0 chr17 80553817 80553851 -14718800 + (TATAA)n Simple_repeat Simple_repeat 1 34 0 1 1199 378 266 10 176 chr17 80553924 80554059 -14718592 - MER2 DNA MER2_type -14 331 217 1 1199 543 216 97 0 chr17 80554059 80554193 -14718458 - B1F1 SINE Alu -1 148 2 1 1199 378 266 10 176 chr17 80554193 80554262 -14718389 - MER2 DNA MER2_type -129 216 161 1 1199 1896 177 19 28 chr17 80554270 80554755 -14717896 - RMER13A LTR ERVK 0 860 146 1 1199 729 186 60 71 chr17 80554755 80554995 -14717656 - RMER13B LTR ERVK -372 270 2 1 1199 378 300 62 0 chr17 80554996 80555126 -14717525 - MER2 DNA MER2_type -179 166 29 1 1199 3349 18 3 0 chr17 80555156 80555538 -14717113 + L1Md_F2 LINE L1 6200 6582 0 1 1199 513 0 0 0 chr17 80555686 80555743 -14716908 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1199 226 250 14 14 chr17 80555748 80555817 -14716834 - ID4_ SINE ID -13 70 2 1 1199 459 0 0 0 chr17 80555902 80555953 -14716698 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1 1199 319 202 65 73 chr17 80555969 80556092 -14716559 - RSINE1 SINE B4 -5 160 39 1 1199 816 229 148 0 chr17 80556548 80556731 -14715920 - B3 SINE B2 -6 210 1 1 1199 676 160 3 8 chr17 80557334 80557463 -14715188 - B1_Mus1 SINE Alu 0 148 19 1 1199 23 33 0 0 chr17 80557807 80557837 -14714814 + AT_rich Low_complexity Low_complexity 1 30 0 1 1199 965 142 13 7 chr17 80557846 80557995 -14714656 - B1_Mur4 SINE Alu 0 150 1 1 1199 440 253 92 33 chr17 80558007 80558191 -14714460 - B3A SINE B2 -3 195 1 1 1199 2618 66 30 0 chr17 80558522 80558857 -14713794 - ORR1A1 LTR MaLR 0 346 2 1 1199 1376 84 10 16 chr17 80559422 80559616 -14713035 + B2_Mm1t SINE B2 1 193 0 1 1199 553 228 10 10 chr17 80559618 80559720 -14712931 + PB1 SINE Alu 1 102 -25 1 1199 1140 81 0 39 chr17 80560223 80560377 -14712274 + B1_Mus1 SINE Alu 1 148 0 1 1199 1492 0 0 22 chr17 80560390 80560572 -14712079 + (GGAAA)n Simple_repeat Simple_repeat 3 180 0 1 1199 1647 229 33 44 chr17 80560793 80561250 -14711401 - RLTR20A LTR ERVK 0 541 90 1 1199 408 20 0 0 chr17 80561661 80561710 -14710941 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 1199 504 256 216 12 chr17 80561862 80561923 -14710728 + ID_B1 SINE B4 1 95 -129 1 1199 435 68 0 0 chr17 80561923 80561982 -14710669 + (CACTG)n Simple_repeat Simple_repeat 2 60 0 1 1199 504 256 216 12 chr17 80561982 80562082 -14710569 + ID_B1 SINE B4 96 195 -29 1 1199 624 50 0 0 chr17 80562082 80562162 -14710489 + (CA)n Simple_repeat Simple_repeat 2 81 0 1 1199 505 286 30 8 chr17 80562540 80562674 -14709977 + RSINE1 SINE B4 3 139 -26 1 1199 444 51 0 0 chr17 80562674 80562733 -14709918 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 1199 930 187 10 26 chr17 80562760 80562952 -14709699 + B2_Mm2 SINE B2 2 190 -5 1 1199 547 244 122 0 chr17 80562975 80563098 -14709553 - B1F2 SINE Alu -10 139 2 1 1199 426 174 210 121 chr17 80563269 80563393 -14709258 - ID_B1 SINE B4 -1 223 89 1 1199 621 135 21 0 chr17 80563303 80563399 -14709252 - B1_Mur2 SINE Alu -51 98 1 1 1199 199 224 60 20 chr17 80564168 80564218 -14708433 - MIRm SINE MIR -28 248 197 1 1199 1077 219 10 0 chr17 80564317 80564509 -14708142 + B3 SINE B2 3 196 -20 1 1199 293 289 99 118 chr17 80564465 80564677 -14707974 + MT2B LTR ERVL 67 274 -327 1 1199 368 275 50 119 chr17 80564546 80564563 -14708088 + B4A SINE B4 71 215 -77 1 1199 523 237 104 30 chr17 80564563 80564689 -14707962 + B1F1 SINE Alu 1 137 -12 1 1199 504 26 25 25 chr17 80564689 80564768 -14707883 + (TAGA)n Simple_repeat Simple_repeat 1 79 0 1 1199 691 277 24 56 chr17 80564776 80564928 -14707723 + RSINE1 SINE B4 23 274 -18 1 1199 768 156 197 48 chr17 80565806 80565994 -14706657 - B3 SINE B2 0 216 1 1 1199 190 271 195 8 chr17 80566170 80566293 -14706358 - L2 LINE L2 -652 2767 2622 1 1199 829 236 29 20 chr17 80566296 80566513 -14706138 + B4 SINE B4 3 230 -62 1 1199 344 277 34 74 chr17 80567972 80568120 -14704531 - MER5A1 DNA MER1_type -20 146 5 1 1199 722 222 79 20 chr17 80568381 80568583 -14704068 + ID_B1 SINE B4 3 216 -8 1 1199 825 131 33 52 chr17 80568820 80568973 -14703678 - B1_Mur4 SINE Alu 0 150 1 2 1199 25 31 0 0 chr17 80568973 80569005 -14703646 + AT_rich Low_complexity Low_complexity 1 32 0 2 1199 409 273 50 170 chr17 80569007 80569076 -14703575 - B1_Mur1 SINE Alu -8 141 74 2 1199 642 200 104 0 chr17 80569076 80569211 -14703440 + B1_Mur4 SINE Alu 2 150 0 2 1199 409 273 50 170 chr17 80569211 80569300 -14703351 - B1_Mur1 SINE Alu -76 73 2 2 1199 254 180 0 47 chr17 80569486 80569550 -14703101 + B3 SINE B2 151 211 -5 2 1199 416 204 143 0 chr17 80569619 80569717 -14702934 - PB1D9 SINE Alu 0 120 9 2 1199 211 180 57 129 chr17 80569735 80569805 -14702846 + PB1D10 SINE Alu 46 110 -7 2 1199 1046 208 44 5 chr17 80569820 80570023 -14702628 + B3 SINE B2 3 213 -3 2 1199 188 319 0 0 chr17 80570879 80570926 -14701725 - MIR SINE MIR -98 164 118 2 1199 1295 27 0 0 chr17 80571133 80571279 -14701372 - B1_Mus2 SINE Alu -1 146 1 2 1199 4428 151 103 40 chr17 80571279 80572111 -14700540 - RMER19B LTR ERVK -17 885 1 2 1199 433 302 229 27 chr17 80572449 80572679 -14699972 - B4 SINE B4 0 292 23 2 1199 489 235 98 78 chr17 80572901 80573286 -14699365 - RLTR15 LTR ERVK -2 357 1 2 1199 627 288 148 54 chr17 80573321 80573417 -14699234 - MLT1G3 LTR MaLR -193 402 299 2 1199 401 0 20 0 chr17 80573417 80573466 -14699185 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1199 627 288 148 54 chr17 80573466 80573700 -14698951 - MLT1G3 LTR MaLR -297 298 41 2 1199 316 322 47 70 chr17 80574215 80574472 -14698179 + L2 LINE L2 1023 1273 -2146 2 1199 242 196 0 21 chr17 80574682 80574729 -14697922 + (CGGA)n Simple_repeat Simple_repeat 2 47 0 2 1199 1215 41 7 0 chr17 80575161 80575307 -14697344 - B1_Mus2 SINE Alu 0 147 1 2 1199 316 154 123 0 chr17 80575596 80575661 -14696990 - URR1A DNA MER1_type -105 121 49 2 1199 448 154 0 117 chr17 80575708 80575811 -14696840 - B1_Mur2 SINE Alu -9 140 50 2 1199 324 240 83 16 chr17 80575793 80575909 -14696742 - B1F1 SINE Alu -15 134 10 2 1199 231 264 187 0 chr17 80575925 80576016 -14696635 - PB1D7 SINE Alu -1 119 12 2 1199 781 261 0 79 chr17 80576071 80576300 -14696351 - B3 SINE B2 -4 212 2 2 1199 667 218 7 14 chr17 80576488 80576632 -14696019 + B1_Mus1 SINE Alu 5 147 -1 2 1199 1234 54 0 0 chr17 80576633 80576780 -14695871 + B1_Mus2 SINE Alu 1 147 0 2 1199 240 200 0 0 chr17 80576849 80576904 -14695747 + GA-rich Low_complexity Low_complexity 3 57 0 2 1199 747 153 7 99 chr17 80576936 80576973 -14695678 - B1_Mur2 SINE Alu -1 148 124 2 1199 1067 136 182 5 chr17 80576973 80577165 -14695486 - URR1A DNA MER1_type 0 226 1 2 1199 747 153 7 99 chr17 80577165 80577279 -14695372 - B1_Mur2 SINE Alu -26 123 11 2 1199 343 297 45 0 chr17 80577181 80577292 -14695359 - B4 SINE B4 -94 198 83 2 1199 1094 49 7 7 chr17 80578163 80578298 -14694353 + B1_Mus1 SINE Alu 4 139 -9 2 1199 207 0 0 0 chr17 80578298 80578321 -14694330 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2 1199 1374 111 16 0 chr17 80578511 80578700 -14693951 + B2_Mm2 SINE B2 1 192 -3 2 1199 541 261 9 0 chr17 80578826 80578941 -14693710 + B1_Mur2 SINE Alu 1 116 -33 2 1199 222 274 19 0 chr17 80579010 80579116 -14693535 + (TA)n Simple_repeat Simple_repeat 1 108 0 2 1199 276 30 0 0 chr17 80579334 80579367 -14693284 + (TA)n Simple_repeat Simple_repeat 1 33 0 2 1199 1964 111 34 10 chr17 80579556 80579847 -14692804 + L1Md_F2 LINE L1 6285 6582 0 2 1199 353 233 87 0 chr17 80579975 80580078 -14692573 + B4 SINE B4 117 228 -64 2 1199 249 176 318 34 chr17 80580081 80580169 -14692482 + PB1D10 SINE Alu 5 117 0 2 1199 461 254 41 27 chr17 80580348 80580373 -14692278 - B1_Mur1 SINE Alu 0 149 127 2 1199 279 0 0 0 chr17 80580373 80580404 -14692247 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 2 1199 572 191 17 17 chr17 80580404 80580524 -14692127 - PB1D9 SINE Alu -23 126 2 2 1199 481 260 46 40 chr17 80580527 80580679 -14691972 - ID_B1 SINE B4 -71 153 1 2 1199 231 189 0 0 chr17 80581584 80581637 -14691014 + GA-rich Low_complexity Low_complexity 1 53 0 2 1199 1238 41 7 0 chr17 80581791 80581937 -14690714 + B1_Mm SINE Alu 1 147 0 2 1199 850 187 0 0 chr17 80581961 80582095 -14690556 + B1_Mus1 SINE Alu 2 135 -13 2 1199 267 327 48 38 chr17 80582149 80582254 -14690397 + B1_Mus1 SINE Alu 1 106 -42 2 1199 207 0 0 0 chr17 80582931 80582954 -14689697 + (G)n Simple_repeat Simple_repeat 1 23 0 2 1199 706 182 25 0 chr17 80582973 80583094 -14689557 - RSINE1 SINE B4 -39 126 3 2 1199 407 200 274 13 chr17 80583896 80584053 -14688598 + B3A SINE B2 1 198 0 2 1199 441 0 0 0 chr17 80584459 80584508 -14688143 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1199 598 304 84 49 chr17 80584519 80584782 -14687869 - B4A SINE B4 -8 284 13 2 1199 254 270 57 48 chr17 80585115 80585220 -14687431 + RMER15 LTR ERVL 34 139 -436 2 1199 783 226 131 70 chr17 80585221 80585583 -14687068 - MT2B LTR ERVL -7 594 71 2 1199 1214 117 16 0 chr17 80585604 80585792 -14686859 + B2_Mm1a SINE B2 2 192 -1 2 1199 647 312 38 55 chr17 80585801 80586093 -14686558 + RMER15 LTR ERVL 276 562 -13 2 1199 473 136 0 0 chr17 80586278 80586344 -14686307 + B2_Mm2 SINE B2 1 66 -129 2 1199 1223 159 160 33 chr17 80586434 80586766 -14685885 - ORR1D1 LTR MaLR 0 374 1 2 1199 184 196 193 18 chr17 80586772 80586829 -14685822 - L4 LINE RTE -1717 312 246 2 1199 271 317 9 103 chr17 80586876 80586889 -14685762 + MT2B LTR ERVL 153 154 -447 2 1199 651 244 16 1 chr17 80586889 80587027 -14685624 + B1_Mur4 SINE Alu 1 140 -10 2 1199 270 0 0 0 chr17 80587027 80587057 -14685594 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 2 1199 1208 34 0 7 chr17 80587129 80587275 -14685376 - B1_Mus2 SINE Alu -2 145 1 2 1199 337 285 174 0 chr17 80587685 80587829 -14684822 + B3 SINE B2 48 216 0 2 1199 1850 298 78 42 chr17 80587963 80588346 -14684305 + RMER15-int LTR ERVL 1152 1554 -3445 2 1199 221 0 0 33 chr17 80588346 80588376 -14684275 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1199 1850 298 78 42 chr17 80588376 80588709 -14683942 + RMER15-int LTR ERVL 1555 1893 -3106 2 1199 396 0 0 0 chr17 80588713 80588757 -14683894 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1199 763 128 6 92 chr17 80588975 80589138 -14683513 - B1_Mur4 SINE Alu 0 150 2 2 1199 1661 259 133 65 chr17 80589438 80590252 -14682399 + Lx8 LINE L1 6196 7064 -409 2 1199 1434 75 37 0 chr17 80590304 80590492 -14682159 + B2_Mm2 SINE B2 1 195 0 2 1199 963 126 21 0 chr17 80590542 80590685 -14681966 + B1_Mus2 SINE Alu 2 147 0 2 1199 556 290 49 11 chr17 80590775 80590960 -14681691 + RMER15 LTR ERVL 371 562 -13 2 1199 446 88 15 0 chr17 80591092 80591160 -14681491 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 2 1199 28 0 0 0 chr17 80591176 80591204 -14681447 + AT_rich Low_complexity Low_complexity 1 28 0 2 1199 251 261 57 0 chr17 80591221 80591309 -14681342 + L1M4 LINE L1 2244 2336 -3810 2 1199 3234 94 306 40 chr17 80591502 80591909 -14680742 + RLTR33 LTR ERVK 1 523 -155 2 1199 1354 68 10 40 chr17 80591909 80592108 -14680543 + B2_Mm1t SINE B2 1 193 0 2 1199 3234 90 108 45 chr17 80592108 80592260 -14680391 + RLTR33 LTR ERVK 524 678 0 2 1199 297 0 0 0 chr17 80592365 80592398 -14680253 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1199 1541 131 77 68 chr17 80593045 80593356 -14679295 - MTC LTR MaLR 0 421 108 2 1199 1118 88 0 7 chr17 80593356 80593504 -14679147 + B1_Mus1 SINE Alu 2 148 0 2 1199 658 217 6 6 chr17 80593505 80593672 -14678979 + GA-rich Low_complexity Low_complexity 2 168 0 2 1199 248 286 242 39 chr17 80593793 80593946 -14678705 - Cheshire DNA MER1_type -2209 211 28 2 1199 419 326 7 34 chr17 80594018 80594164 -14678487 - RSINE1 SINE B4 -8 157 16 2 1199 545 217 41 8 chr17 80594174 80594295 -14678356 - MTEa LTR MaLR 0 379 255 2 1199 500 285 109 0 chr17 80594348 80594485 -14678166 - B3 SINE B2 -10 206 55 2 1199 499 248 65 7 chr17 80595041 80595179 -14677472 + B1_Mus2 SINE Alu 1 146 -1 2 1199 603 196 104 8 chr17 80595213 80595347 -14677304 + B1_Mur1 SINE Alu 2 148 -1 2 1199 426 274 49 0 chr17 80595349 80595451 -14677200 + B3 SINE B2 4 110 -106 2 1199 813 272 109 9 chr17 80595514 80595744 -14676907 - 7SK RNA RNA -78 253 1 2 1199 259 191 75 113 chr17 80595751 80595830 -14676821 + L1MC LINE L1 5625 5701 -632 2 1199 1272 106 5 36 chr17 80595830 80596026 -14676625 - B2_Mm2 SINE B2 -3 192 3 2 1199 259 191 75 113 chr17 80596026 80596052 -14676599 + L1MC LINE L1 5702 5726 -607 2 1199 742 148 101 22 chr17 80596105 80596243 -14676408 + B1_Mur3 SINE Alu 1 149 0 2 1199 204 67 0 0 chr17 80596243 80596273 -14676378 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 2 1199 1190 55 0 7 chr17 80596478 80596625 -14676026 + B1_Mus1 SINE Alu 2 147 -1 2 1199 346 287 23 0 chr17 80596686 80596773 -14675878 + B1_Mm SINE Alu 11 99 -48 2 1199 258 261 99 145 chr17 80596802 80596954 -14675697 + PB1D10 SINE Alu 1 145 -4 2 1199 461 272 122 2 chr17 80597192 80597343 -14675308 + B3A SINE B2 48 208 -8 2 1199 6515 87 86 3 chr17 80597432 80598775 -14673876 + Lx LINE L1 5166 6601 -53 2 1199 578 137 38 29 chr17 80598795 80598900 -14673751 + B1_Mus1 SINE Alu 1 106 -42 2 1199 398 236 115 26 chr17 80598800 80598913 -14673738 + ID_B1 SINE B4 86 208 -16 2 1199 238 349 0 0 chr17 80599020 80599083 -14673568 - ID_B1 SINE B4 -53 171 109 2 1199 636 232 47 40 chr17 80602698 80602846 -14669805 + B1_Mur4 SINE Alu 2 150 0 2 1199 351 319 33 0 chr17 80602975 80603066 -14669585 - RSINE1 SINE B4 -38 127 34 2 1199 654 120 175 25 chr17 80603286 80603406 -14669245 + B1_Mus1 SINE Alu 1 138 -10 2 1199 30 45 0 0 chr17 80604851 80604895 -14667756 + AT_rich Low_complexity Low_complexity 1 44 0 3 1199 243 245 208 21 chr17 80604999 80605095 -14667556 + B1F SINE Alu 34 147 -2 3 1199 24 32 0 0 chr17 80605756 80605787 -14666864 + GC_rich Low_complexity Low_complexity 1 31 0 3 1199 1338 69 5 82 chr17 80607556 80607762 -14664889 - B2_Mm1a SINE B2 -2 191 2 3 1199 230 156 0 0 chr17 80607783 80607828 -14664823 + A-rich Low_complexity Low_complexity 1 45 0 3 1199 1340 74 34 0 chr17 80608011 80608186 -14664465 - B2_Mm2 SINE B2 -14 181 1 3 1199 808 192 7 7 chr17 80608589 80608736 -14663915 - B1_Mur3 SINE Alu -1 148 2 3 1199 1395 40 11 6 chr17 80608849 80609010 -14663641 + B2_Mm1a SINE B2 1 160 -33 3 1199 279 0 0 0 chr17 80609010 80609041 -14663610 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 3 1199 1395 40 11 6 chr17 80609041 80609056 -14663595 + B2_Mm1a SINE B2 161 177 -16 3 1199 247 250 90 135 chr17 80609086 80609197 -14663454 + B1F SINE Alu 44 149 0 3 149 1146 89 0 0 chr17 80609252 80609398 -14663253 - B1_Mus1 SINE Alu -1 147 2 3 1200 1240 48 0 0 chr17 80609614 80609760 -14662891 - B1_Mus1 SINE Alu 0 148 3 3 1200 660 190 70 35 chr17 80609919 80610061 -14662590 + B1_Mur4 SINE Alu 2 148 -2 3 1200 1174 75 0 0 chr17 80610272 80610418 -14662233 + B1_Mus2 SINE Alu 1 146 -1 3 1200 423 0 0 0 chr17 80610422 80610469 -14662182 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1200 238 274 16 0 chr17 80610580 80610642 -14662009 + B4 SINE B4 90 152 -140 3 1200 883 71 150 0 chr17 80611070 80611197 -14661454 + B1_Mus1 SINE Alu 3 148 0 3 1200 225 65 0 0 chr17 80611197 80611228 -14661423 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 3 1200 444 298 23 15 chr17 80611448 80611581 -14661070 + B1_Mm SINE Alu 1 134 -13 3 1200 478 301 41 0 chr17 80611598 80611721 -14660930 + RSINE1 SINE B4 4 131 -34 3 1200 1031 115 0 8 chr17 80611725 80611963 -14660688 + (TG)n Simple_repeat Simple_repeat 1 236 0 3 1200 603 174 0 76 chr17 80612057 80612188 -14660463 + B1_Mur1 SINE Alu 29 149 0 3 1200 300 27 0 0 chr17 80612188 80612225 -14660426 + (GAA)n Simple_repeat Simple_repeat 2 38 0 3 1200 617 212 45 0 chr17 80612230 80612362 -14660289 + ID_B1 SINE B4 84 221 -3 3 1200 1516 59 21 0 chr17 80612387 80612574 -14660077 + B2_Mm1t SINE B2 3 193 0 3 1200 1181 50 0 0 chr17 80612594 80612733 -14659918 + B1_Mus1 SINE Alu 1 139 -9 3 1200 329 169 0 0 chr17 80612778 80612837 -14659814 + B1_Mus1 SINE Alu 2 60 -88 3 1200 472 145 12 0 chr17 80612943 80613026 -14659625 + B1_Mur4 SINE Alu 66 149 -1 3 1200 234 0 0 0 chr17 80613027 80613053 -14659598 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 1200 274 151 360 0 chr17 80613088 80613174 -14659477 + MER2 DNA MER2_type 86 202 -143 3 1200 637 218 38 0 chr17 80613175 80613308 -14659343 + B1_Mus2 SINE Alu 5 142 -5 3 1200 1394 62 6 11 chr17 80613342 80613520 -14659131 - B2_Mm2 SINE B2 -18 177 1 3 1200 465 292 14 14 chr17 80613798 80613944 -14658707 + B1F2 SINE Alu 4 149 0 3 1200 308 328 38 52 chr17 80613953 80614165 -14658486 + B4A SINE B4 35 243 -49 3 1200 210 37 0 0 chr17 80614316 80614343 -14658308 + (TTGG)n Simple_repeat Simple_repeat 2 28 0 3 1200 433 267 10 0 chr17 80614580 80614681 -14657970 + B1_Mur4 SINE Alu 39 140 -10 3 1200 201 39 0 0 chr17 80614695 80614721 -14657930 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 3 1200 183 80 0 0 chr17 80617228 80617253 -14655398 + (TCC)n Simple_repeat Simple_repeat 1 25 0 3 1200 571 340 38 41 chr17 80617694 80617803 -14654848 + B4A SINE B4 3 107 -185 3 1200 1500 63 16 0 chr17 80617803 80617992 -14654659 - B2_Mm2 SINE B2 -3 192 1 3 1200 571 340 38 41 chr17 80617992 80618173 -14654478 + B4A SINE B4 108 291 -1 3 1200 482 273 25 8 chr17 80618271 80618393 -14654258 - ID_B1 SINE B4 -99 125 2 3 1200 440 257 18 0 chr17 80618426 80618535 -14654116 + PB1D10 SINE Alu 1 111 -6 3 1200 819 179 14 7 chr17 80618568 80618714 -14653937 + B1_Mus2 SINE Alu 1 147 0 3 1200 199 351 26 13 chr17 80618724 80618802 -14653849 - L2b LINE L2 -24 3351 3273 3 1200 1165 64 0 0 chr17 80618861 80619001 -14653650 - B1_Mus2 SINE Alu -5 142 3 3 1200 1057 80 148 0 chr17 80619009 80619171 -14653480 - B2_Mm2 SINE B2 -6 189 4 3 1200 306 87 0 0 chr17 80619253 80619299 -14653352 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1200 513 298 0 39 chr17 80619317 80619446 -14653205 + ID_B1 SINE B4 82 205 -19 3 1200 276 30 0 0 chr17 80619934 80619967 -14652684 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 3 1200 714 197 0 27 chr17 80620225 80620371 -14652280 - B1_Mur2 SINE Alu -5 144 3 3 1200 230 333 98 14 chr17 80620435 80620578 -14652073 - B4A SINE B4 -128 164 10 3 1200 3080 128 51 21 chr17 80620586 80621120 -14651531 - RLTR31_Mur LTR ERVK -3 550 1 3 1200 540 186 221 0 chr17 80621149 80621262 -14651389 - B1_Mur1 SINE Alu -7 142 5 3 1200 213 65 0 0 chr17 80621277 80621308 -14651343 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1200 437 280 51 0 chr17 80621311 80621429 -14651222 - RSINE1 SINE B4 -36 129 6 3 1200 212 258 48 76 chr17 80621431 80621444 -14651207 - B3A SINE B2 -95 103 2 3 1200 398 182 22 43 chr17 80621444 80621536 -14651115 - B4A SINE B4 -201 91 2 3 1200 443 167 11 0 chr17 80621549 80621639 -14651012 + (TA)n Simple_repeat Simple_repeat 1 91 0 3 1200 706 191 94 64 chr17 80621639 80621841 -14650810 - B3 SINE B2 -8 208 1 3 1200 409 278 194 6 chr17 80621883 80622053 -14650598 - B4 SINE B4 -10 282 81 3 1200 1207 47 0 20 chr17 80622176 80622327 -14650324 + B1_Mus1 SINE Alu 1 148 0 3 1200 380 253 76 16 chr17 80622393 80622522 -14650129 - B1_Mus1 SINE Alu 0 149 2 3 1200 1198 49 0 0 chr17 80622936 80623079 -14649572 - B1_Mus2 SINE Alu 0 147 5 3 1200 522 34 261 0 chr17 80623324 80623412 -14649239 + B1_Mus1 SINE Alu 38 148 0 3 1200 1023 110 125 17 chr17 80624105 80624281 -14648370 - B2_Mm2 SINE B2 0 195 1 3 1200 1516 50 6 0 chr17 80624707 80624889 -14647762 + B2_Mm1a SINE B2 2 184 -9 3 1200 446 246 140 0 chr17 80625321 80625435 -14647216 - ID_B1 SINE B4 -17 207 78 3 1200 471 245 10 0 chr17 80625434 80625532 -14647119 - ID_B1 SINE B4 -1 223 125 3 1200 226 339 0 35 chr17 80625438 80625551 -14647100 + YREP_Mm Unknown Unknown 182 290 -1522 3 1200 252 0 0 0 chr17 80625665 80625693 -14646958 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 1200 695 112 37 0 chr17 80625693 80625800 -14646851 - PB1D9 SINE Alu -9 111 1 3 1200 1168 130 27 0 chr17 80625808 80625992 -14646659 - B2_Mm2 SINE B2 -5 190 2 3 1200 235 309 31 23 chr17 80626154 80626283 -14646368 + L1MD LINE L1 3639 3768 -2378 3 1200 502 107 0 0 chr17 80626321 80626396 -14646255 - B1_Mus2 SINE Alu 0 147 73 3 1200 351 0 0 0 chr17 80626469 80626508 -14646143 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1200 446 238 147 5 chr17 80626558 80626748 -14645903 + L1MD3 LINE L1 7739 7955 -40 3 1200 447 217 8 42 chr17 80626803 80626923 -14645728 + B1_Mur1 SINE Alu 6 121 -28 3 1200 22 70 0 0 chr17 80627773 80627816 -14644835 + AT_rich Low_complexity Low_complexity 1 43 0 3 1200 796 222 0 0 chr17 80627871 80628015 -14644636 + B1_Mus1 SINE Alu 3 146 -2 3 1200 1122 58 0 0 chr17 80628033 80628171 -14644480 + B1_Mm SINE Alu 1 138 -9 3 1200 288 0 0 0 chr17 80628171 80628203 -14644448 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 3 1200 259 54 0 0 chr17 80628322 80628359 -14644292 + B3 SINE B2 2 38 -178 3 1200 715 81 338 0 chr17 80628360 80628496 -14644155 - B2_Mm2 SINE B2 -13 182 1 3 1200 593 222 77 104 chr17 80629022 80629243 -14643408 + B3 SINE B2 2 216 0 3 1200 754 71 0 0 chr17 80629279 80629391 -14643260 + B1_Mus2 SINE Alu 36 147 0 3 1200 511 112 25 93 chr17 80629432 80629550 -14643101 - PB1D9 SINE Alu -1 119 10 3 1200 479 241 8 33 chr17 80629639 80629759 -14642892 - B1F SINE Alu 0 149 33 3 1200 417 312 30 55 chr17 80629644 80629844 -14642807 - ID_B1 SINE B4 -1 223 29 3 1200 821 120 8 0 chr17 80629912 80630045 -14642606 + (TTC)n Simple_repeat Simple_repeat 2 135 0 3 1200 375 252 29 91 chr17 80631062 80631237 -14641414 - RSINE1 SINE B4 0 165 2 3 1200 322 255 133 0 chr17 80631450 80631548 -14641103 - RSINE1 SINE B4 -51 114 4 3 1200 241 313 132 0 chr17 80631623 80631706 -14640945 + MER20 DNA MER1_type 67 160 -59 3 1200 3146 17 0 0 chr17 80631725 80632071 -14640580 - ORR1A0 LTR MaLR 0 346 1 3 1200 258 289 24 0 chr17 80632438 80632521 -14640130 - PB1D10 SINE Alu -32 85 1 3 1200 270 81 0 0 chr17 80632684 80632721 -14639930 + (TCCCC)n Simple_repeat Simple_repeat 4 40 0 3 1200 1200 110 50 0 chr17 80632736 80632918 -14639733 - B2_Mm2 SINE B2 -4 191 1 3 1200 229 184 0 109 chr17 80632929 80632981 -14639670 - ORR1C1 LTR MaLR -310 68 23 3 1200 1891 155 37 48 chr17 80632981 80633360 -14639291 + ORR1C1 LTR MaLR 1 375 -3 3 1200 898 235 57 11 chr17 80633495 80633758 -14638893 + B4A SINE B4 1 275 -17 3 1200 273 293 0 0 chr17 80633831 80633913 -14638738 + ID4_ SINE ID 2 83 0 3 1200 297 118 0 0 chr17 80634472 80634523 -14638128 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 1200 608 176 200 35 chr17 80634712 80634912 -14637739 - B4A SINE B4 -59 233 1 4 1200 189 0 0 0 chr17 80635214 80635235 -14637416 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 4 1200 1402 87 16 0 chr17 80635243 80635426 -14637225 + B2_Mm2 SINE B2 2 187 -8 4 1200 872 117 7 0 chr17 80635787 80635924 -14636727 - B1_Mus2 SINE Alu 0 147 10 4 1200 458 256 38 140 chr17 80635790 80635976 -14636675 - B4 SINE B4 -69 223 57 4 1200 562 253 65 46 chr17 80636008 80636161 -14636490 - RSINE1 SINE B4 -4 161 6 4 1200 497 231 180 6 chr17 80636199 80636382 -14636269 - B3 SINE B2 0 216 2 4 1200 687 50 29 20 chr17 80636605 80636707 -14635944 + B2_Mm2 SINE B2 86 188 -7 4 1200 1237 63 85 11 chr17 80636741 80636917 -14635734 - B2_Mm2 SINE B2 -6 189 1 4 1200 1221 48 0 0 chr17 80637149 80637295 -14635356 - B1_Mus2 SINE Alu 0 147 2 4 1200 280 283 11 0 chr17 80637333 80637425 -14635226 - B3A SINE B2 -99 99 7 4 1200 366 255 37 9 chr17 80638448 80638555 -14634096 - PB1D10 SINE Alu -2 115 6 4 1200 382 184 62 25 chr17 80638709 80638821 -14633830 - PB1D7 SINE Alu -20 129 22 4 1200 542 247 38 19 chr17 80639002 80639159 -14633492 - B3 SINE B2 -28 188 29 4 1200 489 296 19 62 chr17 80639217 80639284 -14633367 - RSINE1 SINE B4 0 165 106 4 1200 1329 87 32 5 chr17 80639284 80639470 -14633181 - B2_Mm2 SINE B2 -3 192 2 4 1200 489 296 19 62 chr17 80639470 80639564 -14633087 - RSINE1 SINE B4 -60 105 11 4 1200 1268 27 0 0 chr17 80639598 80639744 -14632907 - B1_Mm SINE Alu 0 147 2 4 1200 241 341 0 0 chr17 80639754 80639845 -14632806 - ID_B1 SINE B4 0 224 134 4 1200 259 294 0 0 chr17 80639890 80639958 -14632693 - PB1D9 SINE Alu -5 115 48 4 1200 630 241 68 34 chr17 80640163 80640399 -14632252 + MER33 DNA MER1_type 17 260 -64 4 1200 614 49 12 0 chr17 80640452 80640534 -14632117 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 4 1200 1186 56 0 0 chr17 80640534 80640678 -14631973 - B1_Mus2 SINE Alu -3 144 1 4 1200 360 245 0 191 chr17 80640685 80640816 -14631835 - PB1 SINE Alu -3 124 19 4 1200 221 274 78 118 chr17 80640816 80640834 -14631817 - ID_B1 SINE B4 0 220 78 4 1200 283 304 0 12 chr17 80640992 80641072 -14631579 - PB1D7 SINE Alu 0 120 42 4 1200 443 210 0 0 chr17 80641670 80641751 -14630900 + ID4 SINE ID 2 82 -1 4 1200 413 305 35 7 chr17 80641860 80642002 -14630649 - RSINE1 SINE B4 -18 147 2 4 1200 1243 41 0 0 chr17 80642006 80642152 -14630499 - B1_Mus2 SINE Alu -1 146 1 4 1200 412 263 219 0 chr17 80642253 80642390 -14630261 - B3 SINE B2 -6 210 44 4 1200 299 335 41 46 chr17 80642737 80642931 -14629720 + L2a LINE L2 2910 3102 -324 4 1200 558 155 33 33 chr17 80643367 80643487 -14629164 - PB1D9 SINE Alu 0 120 1 4 1200 520 205 42 8 chr17 80645233 80645351 -14627300 - B1F SINE Alu 0 149 28 4 1200 432 91 0 0 chr17 80645362 80645428 -14627223 + (TG)n Simple_repeat Simple_repeat 2 67 0 4 1200 575 215 8 16 chr17 80645428 80645551 -14627100 - RSINE1 SINE B4 -41 124 3 4 1200 265 299 35 0 chr17 80645707 80645794 -14626857 - ID_B1 SINE B4 -38 186 97 4 1200 1085 82 7 0 chr17 80646239 80646385 -14626266 - B1_Mus1 SINE Alu 0 148 2 4 1200 533 228 39 0 chr17 80646594 80646721 -14625930 - B1_Mur1 SINE Alu -1 148 17 4 1200 699 60 216 0 chr17 80646724 80646840 -14625811 - ORR1A2 LTR MaLR 0 327 187 4 1200 1364 96 11 5 chr17 80647108 80647297 -14625354 - B2_Mm1t SINE B2 -3 190 1 4 1200 359 21 21 0 chr17 80647764 80647812 -14624839 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 4 1200 1147 36 0 14 chr17 80647812 80647952 -14624699 - B1_Mus2 SINE Alu -9 138 1 4 1200 754 104 6 16 chr17 80648236 80648373 -14624278 - B1_Mus1 SINE Alu 0 148 6 4 1200 240 265 74 114 chr17 80648245 80648394 -14624257 - B4A SINE B4 -72 220 78 4 1200 246 32 0 0 chr17 80648845 80648876 -14623775 + (CAGGT)n Simple_repeat Simple_repeat 1 31 0 4 1200 895 181 23 15 chr17 80649715 80649903 -14622748 - B3 SINE B2 -3 190 1 4 1200 411 229 115 0 chr17 80649912 80650008 -14622643 - B1F2 SINE Alu -7 142 36 4 1200 310 239 0 14 chr17 80650049 80650121 -14622530 - B1F SINE Alu -9 140 70 4 1200 654 191 96 38 chr17 80650965 80651152 -14621499 - B3A SINE B2 -19 197 1 4 1200 1040 70 0 0 chr17 80651460 80651589 -14621062 + B1_Mus2 SINE Alu 1 129 -18 4 1200 393 116 0 0 chr17 80651589 80651651 -14621000 - B1_Mur4 SINE Alu -55 62 1 4 1200 553 270 23 47 chr17 80652690 80652862 -14619789 - B4 SINE B4 -44 248 81 4 1200 303 250 16 24 chr17 80652862 80652989 -14619662 + CT-rich Low_complexity Low_complexity 1 126 0 4 1200 710 134 0 9 chr17 80653025 80653138 -14619513 - PB1D9 SINE Alu -8 112 1 4 1200 1693 151 26 37 chr17 80653889 80654239 -14618412 + ORR1B1 LTR MaLR 41 386 -8 4 1200 210 143 0 0 chr17 80655000 80655035 -14617616 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 4 1200 201 138 0 0 chr17 80655263 80655292 -14617359 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1200 323 292 28 19 chr17 80655682 80655790 -14616861 - PB1D7 SINE Alu -11 109 1 4 1200 231 36 0 0 chr17 80656213 80656241 -14616410 + (TAGA)n Simple_repeat Simple_repeat 4 31 0 4 1200 735 155 13 66 chr17 80656362 80656514 -14616137 - B1_Mur1 SINE Alu 0 149 6 4 1200 329 243 98 122 chr17 80656367 80656531 -14616120 - B4 SINE B4 -69 223 64 4 1200 815 222 0 14 chr17 80656840 80656986 -14615665 + B1_Mur1 SINE Alu 1 144 -5 4 1200 578 179 0 0 chr17 80657064 80657170 -14615481 - B1_Mus2 SINE Alu 0 147 42 4 1200 223 180 39 20 chr17 80657712 80657763 -14614888 - PB1D10 SINE Alu -37 80 29 4 1200 384 280 39 65 chr17 80657724 80657877 -14614774 - ID_B1 SINE B4 -74 150 2 4 1200 520 248 0 0 chr17 80658241 80658346 -14614305 + B1_Mur1 SINE Alu 3 107 -42 4 1200 490 271 35 81 chr17 80658474 80658647 -14614004 - B4A SINE B4 -83 209 45 4 1200 256 260 201 61 chr17 80658695 80658924 -14613727 - L1MC4 LINE L1 -499 7543 7283 4 1200 371 274 83 19 chr17 80659001 80659109 -14613542 + PB1D10 SINE Alu 3 117 0 4 1200 5571 66 50 63 chr17 80661047 80661860 -14610791 + RLTR13B4 LTR ERVK 1 803 0 4 1200 534 245 76 7 chr17 80662160 80662304 -14610347 - RSINE1 SINE B4 -4 161 8 4 1200 26 30 0 0 chr17 80662309 80662342 -14610309 + AT_rich Low_complexity Low_complexity 1 33 0 4 1200 1037 115 13 13 chr17 80662342 80662492 -14610159 - B1_Mur4 SINE Alu 0 150 1 4 1200 690 231 43 33 chr17 80662518 80662728 -14609923 - B3 SINE B2 -4 212 1 4 1200 228 293 0 0 chr17 80662789 80662847 -14609804 - MIR SINE MIR -1 261 204 4 1200 355 231 207 0 chr17 80662864 80662985 -14609666 - B3A SINE B2 -23 172 27 4 1200 231 114 0 0 chr17 80663400 80663444 -14609207 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1200 498 57 0 0 chr17 80663485 80663555 -14609096 + (TG)n Simple_repeat Simple_repeat 1 70 0 4 1200 651 162 8 0 chr17 80663633 80663750 -14608901 - B1_Mur2 SINE Alu -1 148 31 4 1200 370 310 141 48 chr17 80665265 80665577 -14607074 + L2a LINE L2 3076 3416 -10 4 1200 1148 82 7 0 chr17 80665694 80665841 -14606810 - B1_Mus1 SINE Alu 0 148 1 4 1200 599 211 98 0 chr17 80665845 80665978 -14606673 - B1_Mus2 SINE Alu -1 146 1 4 1200 1653 42 0 0 chr17 80666024 80666216 -14606435 + B2_Mm1t SINE B2 1 192 -1 4 1200 1171 55 7 0 chr17 80667163 80667309 -14605342 + B1_Mus1 SINE Alu 2 148 0 4 1200 183 80 0 0 chr17 80667337 80667362 -14605289 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 1200 599 255 28 0 chr17 80667380 80667525 -14605126 - B1_Mur3 SINE Alu 0 149 1 4 1200 840 223 31 52 chr17 80667610 80667804 -14604847 + B3 SINE B2 2 191 -25 4 1200 1381 40 74 0 chr17 80668403 80668578 -14604073 - B2_Mm1t SINE B2 -4 189 2 4 1200 500 280 78 52 chr17 80668766 80669037 -14603614 + B4A SINE B4 1 278 -14 4 1200 1153 48 0 40 chr17 80669949 80670101 -14602550 - B1_Mus2 SINE Alu 0 147 2 4 1200 370 278 112 46 chr17 80670337 80670533 -14602118 + MER3 DNA MER1_type 1 209 0 4 1200 247 245 79 35 chr17 80670736 80670850 -14601801 + ID_B1 SINE B4 102 220 -4 4 1200 225 244 154 0 chr17 80670889 80670967 -14601684 + L1MA5 LINE L1 6164 6253 -47 4 1200 960 209 0 11 chr17 80671004 80671188 -14601463 + B3A SINE B2 2 183 -15 4 1200 26 50 0 0 chr17 80671201 80671241 -14601410 + AT_rich Low_complexity Low_complexity 1 40 0 4 1200 879 133 0 14 chr17 80671255 80671400 -14601251 + B1_Mur4 SINE Alu 7 149 -1 4 1200 27 0 0 0 chr17 80671407 80671434 -14601217 + AT_rich Low_complexity Low_complexity 1 27 0 4 1200 273 248 102 55 chr17 80671738 80671866 -14600785 + MIRb SINE MIR 21 154 -114 4 1200 224 241 0 17 chr17 80672098 80672157 -14600494 + A-rich Low_complexity Low_complexity 2 59 0 4 1200 586 231 74 0 chr17 80672620 80672741 -14599910 - B1_Mus1 SINE Alu -5 143 14 4 1200 712 245 41 28 chr17 80672818 80673072 -14599579 + L1MB8 LINE L1 5734 5989 -190 4 1200 278 235 58 48 chr17 80673108 80673211 -14599440 + L1MB8 LINE L1 6074 6177 -1 4 1200 316 284 14 0 chr17 80673442 80673516 -14599135 - ID4_ SINE ID -7 76 2 5 1200 308 298 109 21 chr17 80675570 80675762 -14596889 - MIRb SINE MIR -39 229 21 5 1200 1416 43 31 36 chr17 80676007 80676201 -14596450 + B2_Mm1t SINE B2 1 193 0 5 1200 202 258 0 0 chr17 80676201 80676223 -14596428 + A-rich Low_complexity Low_complexity 1 22 0 5 1200 1513 72 0 5 chr17 80676223 80676418 -14596233 + B2_Mm2 SINE B2 2 195 0 5 1200 202 258 0 0 chr17 80676418 80676433 -14596218 + A-rich Low_complexity Low_complexity 23 37 0 5 1200 1181 88 0 0 chr17 80676433 80676581 -14596070 + B1_Mus1 SINE Alu 1 148 0 5 1200 202 258 0 0 chr17 80676581 80676604 -14596047 + A-rich Low_complexity Low_complexity 38 60 0 5 1200 183 42 0 0 chr17 80676610 80676634 -14596017 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1200 867 208 81 0 chr17 80676720 80676917 -14595734 + B3 SINE B2 4 216 0 5 1200 302 203 0 14 chr17 80676961 80677031 -14595620 + PB1D7 SINE Alu 40 108 -12 5 1200 1266 127 107 10 chr17 80677265 80677471 -14595180 + URR1A DNA MER1_type 1 226 0 5 1200 192 77 0 0 chr17 80677921 80677947 -14594704 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 5 1200 656 116 174 0 chr17 80677948 80678069 -14594582 - B1_Mur4 SINE Alu -7 143 2 5 1200 468 205 75 65 chr17 80678171 80678324 -14594327 - ID_B1 SINE B4 -43 249 89 5 1200 354 323 100 45 chr17 80678644 80678913 -14593738 + L2a LINE L2 2975 3258 -168 5 1200 294 236 96 11 chr17 80679158 80679252 -14593399 + B1F SINE Alu 1 102 -47 5 1200 282 143 0 0 chr17 80679347 80679396 -14593255 + (TTCC)n Simple_repeat Simple_repeat 4 52 0 5 1200 632 256 18 18 chr17 80680344 80680507 -14592144 + RSINE1 SINE B4 3 165 0 5 1200 222 128 0 0 chr17 80680612 80680651 -14592000 + (CCG)n Simple_repeat Simple_repeat 2 40 0 5 1200 209 57 29 0 chr17 80680996 80681031 -14591620 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 5 1200 522 203 104 15 chr17 80681031 80681166 -14591485 - B2_Mm2 SINE B2 -33 162 16 5 1200 679 137 81 0 chr17 80681222 80681346 -14591305 + B1_Mur4 SINE Alu 17 150 0 5 1200 921 180 130 0 chr17 80681357 80681557 -14591094 - URR1A DNA MER1_type 0 226 1 5 1200 506 261 39 86 chr17 80681781 80682079 -14590572 + L1M4b LINE L1 3151 3682 -3652 5 1200 488 169 50 102 chr17 80682128 80682272 -14590379 - B1_Mus1 SINE Alu -1 148 9 5 1200 252 281 0 0 chr17 80682311 80682375 -14590276 + L1M4b LINE L1 3552 3615 -3391 5 1200 481 204 46 0 chr17 80682391 80682499 -14590152 - B1_Mur4 SINE Alu -2 148 36 5 1200 326 275 0 8 chr17 80682513 80682634 -14590017 + L1M4b LINE L1 3608 3727 -3279 5 1200 214 275 72 0 chr17 80682699 80682768 -14589883 + L2a LINE L2 3293 3366 -60 5 1200 202 337 57 19 chr17 80682862 80682968 -14589683 - L2a LINE L2 0 3387 3278 5 1200 2066 221 42 9 chr17 80683367 80683824 -14588827 + Lx9 LINE L1 6502 6973 -671 5 1200 560 210 18 65 chr17 80684193 80684361 -14588290 + Lx9 LINE L1 6968 7127 -517 5 1200 2975 15 0 0 chr17 80684354 80684686 -14587965 + L1Md_T LINE L1 5255 5586 -297 5 1200 8654 27 0 0 chr17 80684686 80685704 -14586947 + L1Md_T LINE L1 5587 6582 0 5 1200 1564 191 32 30 chr17 80685712 80686051 -14586600 + Lx9 LINE L1 7137 7476 -168 5 1200 849 103 0 0 chr17 80686052 80686178 -14586473 + (TA)n Simple_repeat Simple_repeat 1 126 0 5 1200 243 0 0 0 chr17 80686178 80686204 -14586447 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1200 332 187 128 16 chr17 80686204 80686329 -14586322 + Lx9 LINE L1 7506 7644 0 5 1200 7435 37 0 0 chr17 80686339 80687207 -14585444 + L1Md_T LINE L1 5715 6582 0 5 1200 244 376 38 27 chr17 80687255 80687438 -14585213 - L2a LINE L2 -257 3169 2985 5 1200 360 0 0 0 chr17 80687709 80687749 -14584902 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1200 680 121 186 0 chr17 80688048 80688172 -14584479 + B1_Mus1 SINE Alu 2 148 0 5 1200 784 134 101 36 chr17 80688394 80688533 -14584118 - B1_Mur3 SINE Alu -1 148 1 5 1200 441 161 40 0 chr17 80690117 80690266 -14582385 + (TA)n Simple_repeat Simple_repeat 1 155 0 5 1200 348 192 29 0 chr17 80690438 80690542 -14582109 + (TA)n Simple_repeat Simple_repeat 1 107 0 5 1200 7013 90 52 18 chr17 80692467 80693533 -14579118 - Lx3A LINE L1 0 6981 5879 5 1200 256 268 115 11 chr17 80694005 80694092 -14578559 + PB1D10 SINE Alu 13 108 -9 5 1200 245 280 12 3 chr17 80694220 80694303 -14578348 - MIR SINE MIR -68 200 117 5 1200 234 226 19 0 chr17 80694488 80694541 -14578110 - B4A SINE B4 -226 66 13 5 1200 712 134 8 8 chr17 80695184 80695304 -14577347 - B1_Mus2 SINE Alu -17 130 11 5 1200 1199 62 0 0 chr17 80695304 80695450 -14577201 + B1_Mus2 SINE Alu 2 147 0 5 1200 935 257 18 18 chr17 80695780 80696002 -14576649 + ID_B1 SINE B4 1 222 -2 5 1200 188 298 0 0 chr17 80696223 80696280 -14576371 + MIRm SINE MIR 220 276 0 5 1200 276 238 0 0 chr17 80696834 80696918 -14575733 + (TG)n Simple_repeat Simple_repeat 1 84 0 5 1200 243 212 0 57 chr17 80696976 80697046 -14575605 + MT2B LTR ERVL 172 237 -364 5 1200 370 141 70 0 chr17 80696986 80697057 -14575594 + PB1D9 SINE Alu 18 93 -27 5 1200 726 206 0 0 chr17 80697102 80697233 -14575418 - B1_Mur1 SINE Alu 0 149 19 5 1200 505 256 171 33 chr17 80697246 80697456 -14575195 - B4A SINE B4 -52 240 2 5 1200 761 312 100 65 chr17 80697706 80697935 -14574716 - L1MB1 LINE L1 -6 6162 5937 5 1200 1227 34 0 7 chr17 80697935 80698081 -14574570 - B1_Mus2 SINE Alu -1 146 2 5 1200 761 312 100 65 chr17 80698081 80698510 -14574141 - L1MB1 LINE L1 -232 5936 5481 5 1200 347 309 34 0 chr17 80698692 80698867 -14573784 - L1MB1 LINE L1 -698 5470 5290 5 1200 212 231 19 0 chr17 80698907 80698959 -14573692 - B1_Mur1 SINE Alu 0 149 97 5 1200 591 243 113 31 chr17 80698968 80699163 -14573488 - B3 SINE B2 0 216 6 5 1200 253 152 22 0 chr17 80699172 80699218 -14573433 - B1_Mur2 SINE Alu -54 95 49 5 1200 315 0 0 0 chr17 80699306 80699341 -14573310 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1200 1240 98 60 11 chr17 80699406 80699591 -14573060 - B2_Mm2 SINE B2 0 195 2 5 1200 12334 80 13 17 chr17 80699617 80700387 -14572264 - MusHAL1 LINE L1 0 3914 3258 5 1200 1155 82 117 0 chr17 80700387 80700558 -14572093 - B2_Mm1t SINE B2 -1 192 2 5 1200 14468 62 47 16 chr17 80700558 80703172 -14569479 - MusHAL1 LINE L1 -635 3279 573 5 1200 555 280 42 0 chr17 80703206 80703349 -14569302 - B1F SINE Alu 0 149 1 5 1200 238 279 90 90 chr17 80703349 80703380 -14569271 - MT2B LTR ERVL -441 160 130 5 1200 237 33 0 0 chr17 80703426 80703456 -14569195 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 1200 571 154 175 25 chr17 80703456 80703567 -14569084 - B1_Mur3 SINE Alu -13 136 7 5 1200 693 258 0 7 chr17 80703630 80703782 -14568869 - B3A SINE B2 -46 152 2 5 1200 288 234 0 126 chr17 80703782 80703909 -14568742 - L1M3 LINE L1 -2248 3892 3782 5 1200 303 256 135 8 chr17 80703905 80704031 -14568620 + L1M3 LINE L1 5067 5208 -932 5 1200 609 273 52 0 chr17 80704068 80704240 -14568411 + B3A SINE B2 2 182 -16 5 1200 545 148 0 11 chr17 80704308 80704392 -14568259 + PB1D9 SINE Alu 1 83 -37 5 1200 326 231 26 0 chr17 80704392 80704470 -14568181 + B4A SINE B4 2 81 -211 5 1200 602 198 74 0 chr17 80704700 80704821 -14567830 - B3 SINE B2 -86 130 1 5 1200 402 270 151 0 chr17 80704905 80705031 -14567620 + ID_B1 SINE B4 80 224 0 5 1200 526 209 7 7 chr17 80705031 80705166 -14567485 + GA-rich Low_complexity Low_complexity 2 136 0 5 1200 665 260 35 6 chr17 80705172 80705346 -14567305 + Lx8 LINE L1 7121 7299 -174 5 1200 1199 55 0 0 chr17 80705672 80705818 -14566833 + B1_Mus2 SINE Alu 1 146 -1 5 1200 240 35 0 0 chr17 80706246 80706275 -14566376 + (TAA)n Simple_repeat Simple_repeat 2 30 0 5 1200 365 222 0 14 chr17 80707847 80707920 -14564731 - ID4_ SINE ID -11 72 1 5 1200 707 158 250 28 chr17 80707942 80708118 -14564533 - B3 SINE B2 0 216 2 5 1200 485 258 40 16 chr17 80708477 80708603 -14564048 - ID_B1 SINE B4 -7 217 89 5 1200 262 169 21 135 chr17 80708521 80708617 -14564034 + YREP_Mm Unknown Unknown 236 320 -1492 5 1200 366 256 0 0 chr17 80709400 80709482 -14563169 + PB1D10 SINE Alu 7 88 -29 5 1200 540 0 0 0 chr17 80709489 80709549 -14563102 + (GA)n Simple_repeat Simple_repeat 1 60 0 5 1200 313 260 26 13 chr17 80709621 80709699 -14562952 - ID4_ SINE ID -3 80 2 5 1200 533 298 0 0 chr17 80709734 80709865 -14562786 - B1F1 SINE Alu -17 132 2 5 1200 414 249 0 92 chr17 80710833 80711028 -14561623 + G-rich Low_complexity Low_complexity 2 178 0 5 1200 252 339 108 52 chr17 80711169 80711437 -14561214 - MLT1J LTR MaLR -19 493 211 5 1200 774 216 17 11 chr17 80713028 80713206 -14559445 - B4A SINE B4 -9 283 105 5 1200 511 188 43 43 chr17 80713384 80713501 -14559150 + B1F SINE Alu 25 141 -8 5 1200 1031 185 46 10 chr17 80713511 80713708 -14558943 + B3 SINE B2 12 215 -1 5 1200 522 304 47 0 chr17 80713792 80713940 -14558711 + RSINE1 SINE B4 5 159 -6 5 1200 319 243 0 41 chr17 80714097 80714170 -14558481 + B1F1 SINE Alu 7 76 -73 5 1200 340 266 25 58 chr17 80714353 80714473 -14558178 - Charlie4z DNA MER1_type -15 152 37 5 1200 349 255 43 0 chr17 80714575 80714669 -14557982 + PB1D10 SINE Alu 3 100 -17 5 1200 180 0 0 0 chr17 80714679 80714699 -14557952 + (CAAAC)n Simple_repeat Simple_repeat 1 20 0 5 1200 257 222 110 14 chr17 80714903 80714976 -14557675 - RSINE1 SINE B4 -15 150 71 5 1200 229 303 45 0 chr17 80715014 80715080 -14557571 - ID_B1 SINE B4 -7 217 149 5 1200 388 268 0 0 chr17 80715095 80715177 -14557474 + ID4_ SINE ID 2 83 0 5 1200 22 35 0 0 chr17 80715624 80715653 -14556998 + AT_rich Low_complexity Low_complexity 1 29 0 5 1200 497 232 26 18 chr17 80715750 80715864 -14556787 - PB1D10 SINE Alu 0 117 3 5 1200 265 225 21 82 chr17 80715780 80715877 -14556774 - MT2B2 LTR ERVL -339 245 155 5 1200 996 262 43 7 chr17 80716239 80716516 -14556135 + B4A SINE B4 3 289 -3 6 1200 955 231 48 108 chr17 80716694 80717131 -14555520 + L1MA7 LINE L1 5876 6286 -5 6 1200 22 0 0 0 chr17 80717132 80717154 -14555497 + AT_rich Low_complexity Low_complexity 1 22 0 6 1200 1154 68 0 7 chr17 80717154 80717292 -14555359 + B1_Mus2 SINE Alu 1 138 -9 6 1200 297 0 0 0 chr17 80717292 80717325 -14555326 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 6 1200 427 269 37 7 chr17 80718952 80719087 -14553564 + ID_B1 SINE B4 85 223 -1 6 1200 207 0 0 0 chr17 80720321 80720344 -14552307 + (GGA)n Simple_repeat Simple_repeat 3 25 0 6 1200 615 167 0 0 chr17 80720504 80720618 -14552033 + G-rich Low_complexity Low_complexity 2 115 0 6 1200 267 154 0 0 chr17 80720618 80720683 -14551968 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 6 1200 292 169 0 17 chr17 80720892 80720952 -14551699 - PB1 SINE Alu -11 116 58 6 1200 326 169 69 14 chr17 80721085 80721157 -14551494 - PB1D10 SINE Alu -10 107 32 6 1200 258 237 17 0 chr17 80721381 80721440 -14551211 + PB1D10 SINE Alu 1 60 -57 6 1200 399 216 117 0 chr17 80721633 80721744 -14550907 + ID_B1 SINE B4 88 211 -13 6 1200 470 256 153 25 chr17 80721834 80722030 -14550621 + ID_B1 SINE B4 2 222 -2 6 1200 659 175 117 0 chr17 80722806 80722926 -14549725 - B1_Mur1 SINE Alu -1 148 15 6 1200 901 178 69 21 chr17 80723951 80724140 -14548511 - B3 SINE B2 -17 199 2 6 1200 225 211 0 0 chr17 80724524 80724581 -14548070 + C-rich Low_complexity Low_complexity 5 61 0 6 1200 427 257 0 10 chr17 80724584 80724686 -14547965 - PB1D10 SINE Alu -16 101 1 6 1200 236 338 0 13 chr17 80724827 80724902 -14547749 + PB1D10 SINE Alu 43 116 -1 6 1200 396 0 0 0 chr17 80724989 80725033 -14547618 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1200 256 250 18 18 chr17 80725050 80725107 -14547544 - RSINE1 SINE B4 -15 150 94 6 1200 500 211 8 58 chr17 80725248 80725369 -14547282 + B1F1 SINE Alu 33 147 -2 6 1200 2807 51 0 28 chr17 80726291 80726653 -14545998 + L1Md_F2 LINE L1 6230 6581 -1 6 1200 718 247 36 12 chr17 80726782 80726950 -14545701 + ID_B1 SINE B4 6 177 -47 6 1200 536 297 74 39 chr17 80726954 80727226 -14545425 + B4A SINE B4 5 292 0 6 1200 304 115 18 88 chr17 80727247 80727304 -14545347 + HAL1-3A_ME LINE L1 1975 2027 -831 6 1200 422 252 54 9 chr17 80727929 80728041 -14544610 + PB1D10 SINE Alu 1 117 0 6 1200 21 0 0 0 chr17 80728254 80728275 -14544376 + AT_rich Low_complexity Low_complexity 1 21 0 6 1200 749 255 28 14 chr17 80728276 80728491 -14544160 - ID_B1 SINE B4 -2 222 5 6 1200 350 281 134 41 chr17 80728973 80729144 -14543507 + B2_Mm2 SINE B2 6 192 -3 6 1200 605 234 72 7 chr17 80729177 80729315 -14543336 + B1F SINE Alu 3 149 0 6 1200 231 36 0 0 chr17 80729409 80729437 -14543214 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 6 1200 728 243 0 0 chr17 80729437 80729573 -14543078 - B1_Mur1 SINE Alu -13 136 1 6 1200 1298 104 5 30 chr17 80729780 80729979 -14542672 - B2_Mm2 SINE B2 0 195 2 6 1200 1390 82 5 11 chr17 80729990 80730176 -14542475 - B2_Mm1a SINE B2 -8 185 1 6 1200 535 228 157 27 chr17 80730192 80730219 -14542432 - B3 SINE B2 -7 209 186 6 1200 213 39 0 0 chr17 80730219 80730245 -14542406 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 1200 535 228 157 27 chr17 80730245 80730402 -14542249 - B3 SINE B2 -31 185 2 6 1200 1514 47 0 45 chr17 80730425 80730465 -14542186 - B2_Mm1a SINE B2 -1 192 161 6 1200 405 0 0 0 chr17 80730465 80730510 -14542141 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 6 1200 1514 47 0 45 chr17 80730510 80730670 -14541981 - B2_Mm1a SINE B2 -33 160 1 6 1200 211 185 37 0 chr17 80730718 80730799 -14541852 + (TAGA)n Simple_repeat Simple_repeat 3 86 0 6 1200 1128 124 0 0 chr17 80731000 80731178 -14541473 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 6 1200 519 45 0 0 chr17 80731178 80731243 -14541408 + (GAAA)n Simple_repeat Simple_repeat 2 67 0 6 1200 1028 194 48 24 chr17 80731420 80731626 -14541025 + B3 SINE B2 5 215 -1 6 1200 259 352 0 0 chr17 80731916 80732004 -14540647 + B3A SINE B2 76 163 -35 6 1200 459 0 0 0 chr17 80732277 80732328 -14540323 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1200 312 27 0 0 chr17 80733337 80733374 -14539277 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1200 341 259 40 67 chr17 80734042 80734191 -14538460 + RSINE1 SINE B4 4 148 -17 6 1200 23 33 0 0 chr17 80734197 80734227 -14538424 + AT_rich Low_complexity Low_complexity 1 30 0 6 1200 582 186 342 0 chr17 80734253 80734414 -14538237 - B3 SINE B2 0 216 1 6 1200 627 279 126 5 chr17 80735704 80735895 -14536756 - MTE2a LTR MaLR 0 379 166 6 1200 691 248 143 0 chr17 80735899 80736060 -14536591 - B3 SINE B2 -30 186 3 6 1200 371 315 46 9 chr17 80736063 80736172 -14536479 - MTE2a LTR MaLR -210 169 57 6 1200 325 271 46 18 chr17 80736971 80737080 -14535571 + PB1D7 SINE Alu 2 113 -7 6 1200 306 0 0 0 chr17 80737097 80737131 -14535520 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 6 1200 628 200 53 8 chr17 80737131 80737262 -14535389 - B1_Mur4 SINE Alu -13 137 1 6 1200 327 239 0 0 chr17 80737691 80737821 -14534830 + (TG)n Simple_repeat Simple_repeat 2 131 0 6 1200 394 342 18 24 chr17 80737830 80737890 -14534761 - RSINE1 SINE B4 0 165 105 6 1200 1020 156 0 0 chr17 80737890 80738070 -14534581 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 1200 394 342 18 24 chr17 80738070 80738174 -14534477 - RSINE1 SINE B4 -61 104 2 6 1200 551 215 90 8 chr17 80739292 80739414 -14533237 + B1_Mur3 SINE Alu 5 136 -13 6 1200 853 73 186 0 chr17 80739667 80739791 -14532860 + B1_Mus1 SINE Alu 2 148 0 6 1200 896 150 0 6 chr17 80739791 80739952 -14532699 + GA-rich Low_complexity Low_complexity 2 161 0 6 1200 261 331 54 101 chr17 80739971 80740119 -14532532 + B1F SINE Alu 1 141 -8 6 1201 313 277 76 55 chr17 80740718 80740863 -14531788 + B4A SINE B4 1 148 -144 6 1201 553 256 83 0 chr17 80741388 80741509 -14531142 + B1F SINE Alu 10 140 -9 6 1201 887 146 15 0 chr17 80741848 80741978 -14530673 - B1_Mus2 SINE Alu -15 132 1 6 1201 3495 30 4 125 chr17 80742474 80742970 -14529681 - RLTR10C LTR ERVK 0 436 1 6 1201 189 0 0 0 chr17 80743533 80743554 -14529097 + (TC)n Simple_repeat Simple_repeat 2 22 0 6 1201 2832 73 11 0 chr17 80743558 80743929 -14528722 - L1_Mus3 LINE L1 -12 6626 6252 6 1201 463 258 22 50 chr17 80744186 80744325 -14528326 + RSINE1 SINE B4 2 136 -29 6 1201 775 235 16 37 chr17 80744732 80744922 -14527729 - B3A SINE B2 -7 191 6 6 1201 298 336 26 8 chr17 80745228 80745345 -14527306 - MIR SINE MIR -57 205 87 6 1201 29 0 0 0 chr17 80745615 80745644 -14527007 + AT_rich Low_complexity Low_complexity 1 29 0 6 1201 752 250 21 21 chr17 80745665 80745857 -14526794 - B3A SINE B2 -6 192 1 6 1201 450 36 0 0 chr17 80746015 80746071 -14526580 + (TC)n Simple_repeat Simple_repeat 2 57 0 6 1201 365 209 110 0 chr17 80746072 80746163 -14526488 - B1_Mus1 SINE Alu -47 101 1 6 1201 249 196 76 124 chr17 80746163 80746177 -14526474 - MT2B LTR ERVL -346 255 156 6 1201 888 191 7 0 chr17 80747235 80747382 -14525269 + B3A SINE B2 1 148 -50 6 1201 384 59 0 0 chr17 80747399 80747450 -14525201 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1201 413 315 8 38 chr17 80747549 80747681 -14524970 + B4A SINE B4 161 288 -4 6 1201 471 116 144 72 chr17 80748287 80748426 -14524225 + B1_Mur1 SINE Alu 1 149 0 6 1201 247 260 24 61 chr17 80748525 80748607 -14524044 + MADE2 DNA Mariner 1 79 -1 6 1201 21 0 0 0 chr17 80748625 80748646 -14524005 + AT_rich Low_complexity Low_complexity 1 21 0 6 1201 230 250 19 0 chr17 80749542 80749594 -14523057 + CT-rich Low_complexity Low_complexity 6 58 0 6 1201 283 309 75 75 chr17 80750247 80750408 -14522243 - RSINE1 SINE B4 0 165 5 6 1201 369 386 28 43 chr17 80750636 80750847 -14521804 - MLT1F2 LTR MaLR -30 530 323 6 1201 371 370 39 6 chr17 80750861 80751094 -14521557 - MLT1F2 LTR MaLR -327 242 1 6 1201 594 302 25 25 chr17 80751129 80751326 -14521325 - B3A SINE B2 0 198 2 6 1201 922 216 53 14 chr17 80751443 80751650 -14521001 - B3 SINE B2 0 216 2 6 1201 181 152 0 57 chr17 80751980 80752015 -14520636 - L3 LINE CR1 -1654 2835 2803 6 1201 435 125 0 0 chr17 80752118 80752190 -14520461 + (TG)n Simple_repeat Simple_repeat 1 72 0 6 1201 486 0 0 0 chr17 80752190 80752243 -14520408 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 1201 523 256 15 23 chr17 80752244 80752376 -14520275 - RSINE1 SINE B4 -20 145 15 6 1201 203 42 60 40 chr17 80752483 80752533 -14520118 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 6 1201 248 319 89 89 chr17 80752602 80752781 -14519870 - ORR1E LTR MaLR -108 251 73 6 1201 405 0 0 0 chr17 80753415 80753460 -14519191 + (CTAGT)n Simple_repeat Simple_repeat 4 48 0 6 1201 388 296 52 22 chr17 80753460 80753595 -14519056 - B1F1 SINE Alu -10 139 1 6 1201 1697 216 66 28 chr17 80753808 80754233 -14518418 + Lx6 LINE L1 6994 7434 -26 6 1201 229 0 83 0 chr17 80754246 80754282 -14518369 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6 1201 203 323 0 15 chr17 80754636 80754702 -14517949 - MIR SINE MIR -67 141 77 6 1201 201 260 0 20 chr17 80754852 80754903 -14517748 + CT-rich Low_complexity Low_complexity 4 53 0 6 1201 25 0 0 0 chr17 80754950 80754975 -14517676 + AT_rich Low_complexity Low_complexity 1 25 0 6 1201 960 264 63 30 chr17 80755086 80755411 -14517240 - ORR1D1 LTR MaLR -2 357 1 6 1201 645 313 0 0 chr17 80755515 80755830 -14516821 + (TG)n Simple_repeat Simple_repeat 1 315 0 7 1201 602 316 0 0 chr17 80755877 80756054 -14516597 + (TG)n Simple_repeat Simple_repeat 1 177 0 7 1201 183 261 0 44 chr17 80756059 80756195 -14516456 + (TATG)n Simple_repeat Simple_repeat 4 133 0 7 1201 541 331 0 0 chr17 80756199 80756374 -14516277 + (TG)n Simple_repeat Simple_repeat 1 175 0 7 1201 655 204 74 140 chr17 80756980 80757174 -14515477 - RMER12 LTR ERVK -120 1202 1016 7 1201 695 12 12 0 chr17 80757174 80757258 -14515393 + (GAGAA)n Simple_repeat Simple_repeat 5 89 0 7 1201 655 204 74 140 chr17 80757258 80757320 -14515331 - RMER12 LTR ERVK -307 1015 963 7 1201 1045 24 8 0 chr17 80757452 80757579 -14515072 - B1_Mus2 SINE Alu -9 138 11 7 1201 1188 283 72 136 chr17 80757633 80757741 -14514910 - RMER12 LTR ERVK -1148 700 590 7 1201 1362 83 28 0 chr17 80757741 80757922 -14514729 - B2_Mm2 SINE B2 -7 188 3 7 1201 1644 224 147 62 chr17 80757922 80758561 -14514090 - RMER12 LTR ERVK -1259 589 1 7 1201 474 65 0 0 chr17 80758690 80758752 -14513899 + (GGGA)n Simple_repeat Simple_repeat 4 65 0 7 1201 218 143 0 79 chr17 80759254 80759330 -14513321 + CT-rich Low_complexity Low_complexity 2 71 0 7 1201 638 263 56 75 chr17 80759357 80759571 -14513080 - ID_B1 SINE B4 0 224 15 7 1201 376 115 0 0 chr17 80762157 80762209 -14510442 - ORR1A4 LTR MaLR 0 329 278 7 1201 1688 148 45 57 chr17 80762209 80762540 -14510111 - ORR1A4 LTR MaLR -2 327 1 7 1201 1064 99 62 62 chr17 80763993 80764186 -14508465 + B2_Mm2 SINE B2 2 194 -1 7 1201 301 359 45 50 chr17 80764807 80764986 -14507665 - MIR3 SINE MIR -1 207 30 7 1201 311 306 93 0 chr17 80764996 80765104 -14507547 + RMER12 LTR ERVK 735 852 -470 7 1201 238 351 94 35 chr17 80765307 80765478 -14507173 - MER102c DNA MER1_type 0 331 151 7 1201 414 111 16 0 chr17 80765577 80765640 -14507011 + B1_Mur4 SINE Alu 79 142 -8 7 1201 402 21 0 0 chr17 80765640 80765687 -14506964 + (TAA)n Simple_repeat Simple_repeat 2 48 0 7 1201 243 88 0 0 chr17 80765758 80765792 -14506859 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 7 1201 458 36 0 0 chr17 80765793 80765848 -14506803 - B2_Mm2 SINE B2 -37 158 104 7 1201 1148 49 154 0 chr17 80765868 80766030 -14506621 - B2_Mm2 SINE B2 -8 187 1 7 1201 443 305 16 0 chr17 80766035 80766163 -14506488 - ID_B1 SINE B4 -6 218 89 7 1201 720 237 85 10 chr17 80766218 80766418 -14506233 + B3 SINE B2 1 215 -1 7 1201 279 79 0 0 chr17 80767300 80767338 -14505313 + (TATG)n Simple_repeat Simple_repeat 3 40 0 7 1201 221 353 43 29 chr17 80768375 80768515 -14504136 - MIRc SINE MIR -106 162 21 7 1201 371 299 134 23 chr17 80768525 80768696 -14503955 + MIRb SINE MIR 64 253 -15 7 1201 523 289 99 119 chr17 80768757 80769169 -14503482 - MLT1A1 LTR MaLR -4 404 1 7 1201 290 282 97 0 chr17 80770028 80770131 -14502520 - L2a LINE L2 -3 3423 3311 7 1201 843 154 20 27 chr17 80770993 80771140 -14501511 + B1_Mus1 SINE Alu 3 148 0 7 1201 183 42 0 0 chr17 80772016 80772040 -14500611 + (TATG)n Simple_repeat Simple_repeat 2 25 0 7 1201 974 126 0 7 chr17 80772040 80772179 -14500472 - B2_Mm2 SINE B2 -50 145 8 7 1201 33 56 0 0 chr17 80773028 80773082 -14499569 + GC_rich Low_complexity Low_complexity 1 54 0 7 1201 866 223 85 0 chr17 80775185 80775373 -14497278 + B3 SINE B2 1 204 -12 7 1201 471 240 52 58 chr17 80775527 80775682 -14496969 + RSINE1 SINE B4 2 155 -10 7 1201 257 281 35 35 chr17 80775736 80775821 -14496830 + MIRc SINE MIR 166 250 -18 7 1201 22 0 0 0 chr17 80776100 80776122 -14496529 + AT_rich Low_complexity Low_complexity 1 22 0 7 1201 2434 49 65 0 chr17 80776590 80776897 -14495754 - ORR1A2 LTR MaLR 0 327 1 7 1201 11250 120 97 16 chr17 80776897 80778714 -14493937 - ORR1A2-int LTR MaLR 0 1963 1 7 1201 2761 56 3 33 chr17 80778714 80778767 -14493884 - ORR1A2 LTR MaLR 0 327 285 7 1201 1495 70 5 11 chr17 80778767 80778955 -14493696 - B2_Mm1t SINE B2 -6 187 1 7 1201 2761 56 3 33 chr17 80778955 80779234 -14493417 - ORR1A2 LTR MaLR -43 284 5 7 1201 294 139 0 0 chr17 80779749 80779792 -14492859 + B3 SINE B2 1 43 -173 7 1201 894 70 2 11 chr17 80779760 80779900 -14492751 + B1_Mus2 SINE Alu 11 149 0 7 1201 599 200 0 0 chr17 80779910 80780005 -14492646 + B3 SINE B2 27 121 -95 7 1201 309 51 0 0 chr17 80780058 80780097 -14492554 + (GAAAA)n Simple_repeat Simple_repeat 5 43 0 7 1201 881 253 167 60 chr17 80780148 80780514 -14492137 + MTD LTR MaLR 1 405 -14 7 1201 267 31 0 0 chr17 80781679 80781711 -14490940 + (TTTC)n Simple_repeat Simple_repeat 2 33 0 7 1201 258 276 48 40 chr17 80784714 80784807 -14487844 - L2b LINE L2 -24 3363 3245 7 1201 263 263 53 0 chr17 80786522 80786598 -14486053 + ID4 SINE ID 2 81 -2 7 1201 180 0 0 0 chr17 80787742 80787762 -14484889 + (TA)n Simple_repeat Simple_repeat 2 21 0 7 1201 281 242 0 0 chr17 80788482 80788544 -14484107 - ID4 SINE ID -20 63 2 7 1201 346 222 32 32 chr17 80791017 80791110 -14481541 + L2 LINE L2 2487 2579 -840 7 1201 897 170 98 20 chr17 80791298 80791502 -14481149 - URR1B DNA MER1_type 0 225 6 7 1201 266 352 72 24 chr17 80791519 80791685 -14480966 + L2 LINE L2 2892 3065 -354 7 1201 981 105 75 0 chr17 80791817 80791950 -14480701 - B1_Mus1 SINE Alu -1 147 5 7 1201 369 210 184 8 chr17 80792928 80793053 -14479598 - B1F SINE Alu -2 147 1 7 1201 21 36 0 0 chr17 80793084 80793112 -14479539 + AT_rich Low_complexity Low_complexity 1 28 0 7 1201 25 0 0 0 chr17 80794762 80794787 -14477864 + AT_rich Low_complexity Low_complexity 1 25 0 7 1201 471 18 0 0 chr17 80798631 80798687 -14473964 + (TC)n Simple_repeat Simple_repeat 1 56 0 7 1201 279 0 0 0 chr17 80798687 80798718 -14473933 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 1201 338 205 12 37 chr17 80799272 80799353 -14473298 - RLTR17 LTR ERVK -325 367 289 7 1201 1408 92 11 16 chr17 80799479 80799667 -14472984 + B2_Mm1t SINE B2 1 187 -6 7 1201 1249 55 7 0 chr17 80800099 80800245 -14472406 - B1_Mus1 SINE Alu 0 148 2 7 1201 258 301 77 34 chr17 80800694 80800811 -14471840 - B4 SINE B4 -169 123 2 7 1201 626 227 11 142 chr17 80801822 80801884 -14470767 - RSINE1 SINE B4 0 165 123 7 1201 1540 74 11 0 chr17 80801884 80802073 -14470578 + B2_Mm1t SINE B2 1 191 -2 7 1201 626 227 11 142 chr17 80802073 80802200 -14470451 - RSINE1 SINE B4 -43 122 1 7 1201 1425 37 5 0 chr17 80803019 80803430 -14469221 + (TG)n Simple_repeat Simple_repeat 1 413 0 7 1201 754 249 37 11 chr17 80803478 80803665 -14468986 - B3A SINE B2 -6 192 1 7 1201 656 177 188 13 chr17 80805619 80805768 -14466883 + B3 SINE B2 37 211 -5 7 1201 844 155 28 0 chr17 80807105 80807247 -14465404 + B1_Mur4 SINE Alu 5 150 0 7 1201 338 311 44 75 chr17 80807110 80807270 -14465381 + B4A SINE B4 94 248 -44 7 1201 27 29 0 0 chr17 80807716 80807750 -14464901 + AT_rich Low_complexity Low_complexity 1 34 0 7 1201 271 324 28 2 chr17 80808757 80808879 -14463772 + MIR SINE MIR 51 186 -90 7 1201 234 0 0 0 chr17 80809088 80809114 -14463537 + (TG)n Simple_repeat Simple_repeat 1 26 0 7 1201 285 98 0 0 chr17 80809470 80809511 -14463140 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1201 584 240 45 149 chr17 80810041 80810242 -14462409 + B3A SINE B2 2 181 -17 7 1201 348 83 0 0 chr17 80810247 80810295 -14462356 + (CA)n Simple_repeat Simple_repeat 1 48 0 7 1201 657 208 274 0 chr17 80810636 80810804 -14461847 - B3 SINE B2 -1 215 2 7 1201 246 227 30 0 chr17 80810820 80810886 -14461765 + GA-rich Low_complexity Low_complexity 3 70 0 7 1201 187 217 169 28 chr17 80810996 80811067 -14461584 - L2c LINE L2 -1 3386 3306 7 1201 810 159 72 0 chr17 80811488 80811626 -14461025 + B1_Mur2 SINE Alu 2 149 0 7 1201 296 269 61 61 chr17 80811900 80811999 -14460652 + ID_B1 SINE B4 2 100 -124 7 1201 226 252 16 20 chr17 80812581 80812663 -14459988 - PB1 SINE Alu 0 127 36 7 1201 21 0 0 0 chr17 80813059 80813080 -14459571 + AT_rich Low_complexity Low_complexity 1 21 0 7 1201 391 32 0 60 chr17 80813117 80813184 -14459467 + (CAAAA)n Simple_repeat Simple_repeat 2 64 0 7 1201 270 264 152 68 chr17 80813260 80813279 -14459372 - B4A SINE B4 -56 236 154 7 1201 372 176 242 0 chr17 80813279 80813370 -14459281 - B1_Mur4 SINE Alu -7 143 31 7 1201 217 288 37 46 chr17 80813531 80813640 -14459011 + RSINE1 SINE B4 56 163 -2 7 1201 235 203 33 17 chr17 80814012 80814072 -14458579 - RMER15 LTR ERVL -104 471 411 7 1201 337 314 118 0 chr17 80814785 80814887 -14457764 - PB1D10 SINE Alu -3 114 1 7 1201 1211 55 7 7 chr17 80814959 80815107 -14457544 + B1_Mus1 SINE Alu 1 148 0 7 1201 543 112 0 0 chr17 80815349 80815438 -14457213 + (CA)n Simple_repeat Simple_repeat 2 90 0 7 1201 330 312 53 23 chr17 80816425 80816556 -14456095 + L1M4b LINE L1 107 241 -7093 7 1201 301 318 18 55 chr17 80817060 80817223 -14455428 + L1M4b LINE L1 932 1088 -6246 7 1201 526 263 143 3 chr17 80817385 80817679 -14454972 + L1M4b LINE L1 1382 1716 -5618 7 1201 341 288 116 16 chr17 80817760 80818022 -14454629 + L1M4b LINE L1 2467 2752 -4582 7 1201 421 208 61 27 chr17 80818664 80818794 -14453857 - B1F1 SINE Alu -1 148 15 7 1201 199 297 54 0 chr17 80819486 80819560 -14453091 - MIRb SINE MIR -55 213 136 7 1201 573 217 26 9 chr17 80821785 80821901 -14450750 - PB1D9 SINE Alu 0 120 3 7 1201 571 99 118 10 chr17 80822294 80822396 -14450255 - PB1D9 SINE Alu -7 113 1 7 1201 22 35 0 0 chr17 80822736 80822765 -14449886 + AT_rich Low_complexity Low_complexity 1 29 0 7 1201 21 36 0 0 chr17 80822797 80822825 -14449826 + AT_rich Low_complexity Low_complexity 1 28 0 7 1201 505 257 35 9 chr17 80823061 80823175 -14449476 - ID_B1 SINE B4 -13 211 95 7 1201 23 33 0 0 chr17 80823325 80823355 -14449296 + AT_rich Low_complexity Low_complexity 1 30 0 7 1201 203 113 54 54 chr17 80823730 80823786 -14448865 + A-rich Low_complexity Low_complexity 2 57 0 7 1201 261 0 0 0 chr17 80824120 80824149 -14448502 + (A)n Simple_repeat Simple_repeat 1 29 0 7 1201 437 0 19 0 chr17 80824252 80824305 -14448346 + (CA)n Simple_repeat Simple_repeat 1 54 0 7 1201 441 0 0 0 chr17 80824305 80824353 -14448298 + (GA)n Simple_repeat Simple_repeat 2 50 0 8 1201 261 286 79 30 chr17 80824586 80824687 -14447964 + PB1D10 SINE Alu 7 112 -5 8 1201 347 202 23 136 chr17 80825156 80825288 -14447363 - PB1D10 SINE Alu 0 117 1 8 1201 243 0 0 0 chr17 80826583 80826610 -14446041 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 1201 483 18 0 0 chr17 80826610 80826665 -14445986 + (GA)n Simple_repeat Simple_repeat 2 57 0 8 1201 1035 252 9 32 chr17 80827015 80827236 -14445415 - ID_B1 SINE B4 -7 217 2 8 1201 280 156 0 0 chr17 80828388 80828433 -14444218 + B1F1 SINE Alu 10 54 -95 8 1201 315 0 0 0 chr17 80828596 80828631 -14444020 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 8 1201 25 51 0 0 chr17 80828724 80828763 -14443888 + AT_rich Low_complexity Low_complexity 1 39 0 8 1201 1148 128 15 56 chr17 80828828 80829026 -14443625 + B2_Mm2 SINE B2 1 190 -5 8 1201 22 35 0 0 chr17 80829885 80829914 -14442737 + AT_rich Low_complexity Low_complexity 1 29 0 8 1201 23 33 0 0 chr17 80829986 80830016 -14442635 + AT_rich Low_complexity Low_complexity 1 30 0 8 1201 1115 124 41 12 chr17 80830025 80830196 -14442455 + B2_Mm2 SINE B2 1 176 -19 8 1201 398 226 268 0 chr17 80830207 80830356 -14442295 + B3 SINE B2 1 189 -27 8 1201 32 57 0 0 chr17 80830732 80830785 -14441866 + AT_rich Low_complexity Low_complexity 1 53 0 8 1201 849 267 10 0 chr17 80834470 80834676 -14437975 - B3 SINE B2 -6 210 3 8 1201 498 228 53 38 chr17 80835196 80835328 -14437323 + RSINE1 SINE B4 1 134 -31 8 1201 443 301 91 51 chr17 80835579 80835754 -14436897 - B3A SINE B2 -16 182 1 8 1201 868 203 71 5 chr17 80835942 80836140 -14436511 - B3 SINE B2 -5 211 1 8 1201 292 220 57 48 chr17 80836206 80836311 -14436340 - PB1D10 SINE Alu 0 117 12 8 1201 247 219 126 58 chr17 80836245 80836332 -14436319 - ID_B1 SINE B4 -67 157 65 8 1201 324 255 56 9 chr17 80836469 80836576 -14436075 - PB1D9 SINE Alu -8 112 1 8 1201 1271 52 81 0 chr17 80836900 80837074 -14435577 - B2_Mm2 SINE B2 -7 188 1 8 1201 353 278 41 0 chr17 80837165 80837262 -14435389 + PB1D7 SINE Alu 6 106 -14 8 1201 1216 35 0 0 chr17 80837437 80837580 -14435071 + B1_Mus2 SINE Alu 5 147 0 8 1201 630 93 0 9 chr17 80838528 80838637 -14434014 - L1Md_F2 LINE L1 -2 6580 6473 8 1201 899 135 21 0 chr17 80838893 80839034 -14433617 + B1_Mur3 SINE Alu 4 147 -2 8 1201 370 282 103 31 chr17 80839176 80839370 -14433281 + B3 SINE B2 9 216 0 8 1201 326 207 243 45 chr17 80839442 80839619 -14433032 - L1MA8 LINE L1 -10 6281 6070 8 1201 207 139 0 0 chr17 80839632 80839668 -14432983 + (TATG)n Simple_repeat Simple_repeat 1 36 0 8 1201 237 65 0 0 chr17 80840135 80840166 -14432485 + (A)n Simple_repeat Simple_repeat 1 31 0 8 1201 195 328 113 16 chr17 80840632 80840756 -14431895 - L2b LINE L2 -2 3373 3238 8 1201 649 252 85 43 chr17 80841881 80842092 -14430559 + B4A SINE B4 4 223 -69 8 1201 689 169 30 8 chr17 80841966 80842097 -14430554 + B1_Mur2 SINE Alu 16 149 0 8 1201 480 320 26 74 chr17 80842114 80842303 -14430348 + B4A SINE B4 108 287 -5 8 1201 295 212 15 15 chr17 80842436 80842503 -14430148 + RSINE1 SINE B4 59 125 -40 8 1201 543 267 0 30 chr17 80842793 80842928 -14429723 - B1F SINE Alu -13 136 6 8 1201 286 226 68 97 chr17 80842978 80843081 -14429570 - RSINE1 SINE B4 -9 156 57 8 1201 655 246 62 28 chr17 80843169 80843345 -14429306 - B3A SINE B2 -9 189 8 8 1201 354 322 53 13 chr17 80843386 80843537 -14429114 - RSINE1 SINE B4 0 165 9 8 1201 204 97 0 0 chr17 80844347 80844378 -14428273 + (CAGA)n Simple_repeat Simple_repeat 3 33 0 8 1201 888 215 103 0 chr17 80845446 80845641 -14427010 + B3 SINE B2 2 216 0 8 1201 449 193 91 9 chr17 80845989 80846099 -14426552 + RSINE1 SINE B4 43 161 -4 8 1201 234 91 0 0 chr17 80846873 80846906 -14425745 + (TAG)n Simple_repeat Simple_repeat 1 33 0 8 1201 347 264 110 0 chr17 80846912 80847003 -14425648 - RSINE1 SINE B4 -7 158 58 8 1201 486 210 271 36 chr17 80847378 80847625 -14425026 + MTD LTR MaLR 1 305 -114 8 1201 410 338 14 14 chr17 80847684 80847891 -14424760 - ID_B1 SINE B4 -17 207 1 8 1201 349 232 110 134 chr17 80848939 80849148 -14423503 - Charlie1a DNA MER1_type -258 1197 994 8 1201 662 218 66 21 chr17 80849820 80850005 -14422646 + B3 SINE B2 2 195 0 8 1201 293 286 0 28 chr17 80850706 80850778 -14421873 - ID4 SINE ID -10 73 4 8 1201 668 243 105 0 chr17 80851675 80851856 -14420795 + B3 SINE B2 7 206 -10 8 1201 428 295 158 0 chr17 80852019 80852202 -14420449 - ID_B1 SINE B4 -12 212 1 8 1201 357 293 168 67 chr17 80852304 80852483 -14420168 + B3A SINE B2 2 198 0 8 1201 189 0 0 0 chr17 80852640 80852661 -14419990 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 1201 21 0 0 0 chr17 80853376 80853397 -14419254 + AT_rich Low_complexity Low_complexity 1 21 0 8 1201 198 0 0 0 chr17 80853417 80853439 -14419212 + (CA)n Simple_repeat Simple_repeat 2 23 0 8 1201 283 187 260 52 chr17 80853778 80853874 -14418777 + PB1D10 SINE Alu 2 117 0 8 1201 930 96 25 70 chr17 80855442 80855599 -14417052 + B1_Mur4 SINE Alu 1 150 0 8 1201 693 24 0 0 chr17 80855750 80855833 -14416818 + (TCCCC)n Simple_repeat Simple_repeat 1 83 0 8 1201 337 245 71 52 chr17 80856097 80856252 -14416399 + RSINE1 SINE B4 4 161 -4 8 1201 387 56 0 0 chr17 80856267 80856321 -14416330 + (TCTG)n Simple_repeat Simple_repeat 2 55 0 8 1201 180 0 0 0 chr17 80856321 80856341 -14416310 + (CA)n Simple_repeat Simple_repeat 1 20 0 8 1201 428 155 24 0 chr17 80856397 80856481 -14416170 + GA-rich Low_complexity Low_complexity 3 88 0 8 1201 224 289 13 13 chr17 80856509 80856586 -14416065 + RSINE1 SINE B4 6 82 -83 8 1201 451 247 0 0 chr17 80856968 80857061 -14415590 + B3A SINE B2 18 110 -88 8 1201 2318 145 7 35 chr17 80857068 80857496 -14415155 + MTC LTR MaLR 6 421 0 8 1201 489 237 49 56 chr17 80858063 80858206 -14414445 + ID_B1 SINE B4 82 223 -1 8 1201 200 200 0 20 chr17 80858315 80858366 -14414285 + CT-rich Low_complexity Low_complexity 5 54 0 8 1201 542 269 8 0 chr17 80858554 80858684 -14413967 - ID_B1 SINE B4 -1 223 93 8 1201 390 69 0 0 chr17 80858928 80858986 -14413665 + (TATG)n Simple_repeat Simple_repeat 1 58 0 8 1201 242 131 47 0 chr17 80858991 80859044 -14413607 + B1_Mur2 SINE Alu 57 111 -9 8 1201 312 83 0 0 chr17 80860125 80860173 -14412478 + (CA)n Simple_repeat Simple_repeat 2 49 0 8 1201 2441 110 20 38 chr17 80860791 80861189 -14411462 + ORR1B1 LTR MaLR 4 394 0 8 1201 311 250 56 22 chr17 80861679 80861769 -14410882 + B4A SINE B4 150 242 -50 8 1201 496 276 103 52 chr17 80862213 80862446 -14410205 - B4A SINE B4 -18 274 30 8 1201 438 196 111 20 chr17 80863919 80864018 -14408633 - PB1D10 SINE Alu -9 108 1 8 1201 1097 199 162 120 chr17 80864243 80864602 -14408049 + ORR1D1 LTR MaLR 1 374 0 8 1201 696 165 70 28 chr17 80864631 80864774 -14407877 + B1_Mur4 SINE Alu 2 150 0 8 1201 734 265 63 5 chr17 80865217 80865407 -14407244 + B3 SINE B2 5 205 -11 8 1201 796 215 0 0 chr17 80865446 80865595 -14407056 + B1F SINE Alu 1 149 0 8 1201 389 274 186 0 chr17 80865688 80865812 -14406839 + B3 SINE B2 2 148 -68 8 1201 398 258 0 0 chr17 80865868 80865957 -14406694 + ID_B1 SINE B4 82 170 -54 8 1201 350 290 84 0 chr17 80865957 80865975 -14406676 + PB1D10 SINE Alu 1 116 -1 8 1201 186 43 0 0 chr17 80866407 80866430 -14406221 + (T)n Simple_repeat Simple_repeat 1 23 0 8 1201 1232 48 0 0 chr17 80866430 80866577 -14406074 - B1_Mus1 SINE Alu 0 148 2 8 1201 1455 56 17 0 chr17 80866780 80866958 -14405693 + B2_Mm2 SINE B2 1 181 -14 8 1201 210 146 24 0 chr17 80866981 80867022 -14405629 + B4 SINE B4 41 82 -210 8 1201 432 48 0 5 chr17 80866986 80867051 -14405600 + B2_Mm2 SINE B2 47 109 -107 8 1201 554 103 0 11 chr17 80867080 80867168 -14405483 + (GAAA)n Simple_repeat Simple_repeat 3 89 0 8 1201 227 143 0 93 chr17 80867654 80867708 -14404943 - ID_B1 SINE B4 -2 222 174 8 1201 334 167 75 25 chr17 80867661 80867741 -14404910 - PB1D9 SINE Alu -9 111 28 8 1201 242 236 11 53 chr17 80867841 80868029 -14404622 + (CACAC)n Simple_repeat Simple_repeat 1 180 0 8 1201 233 280 63 36 chr17 80868118 80868229 -14404422 - PB1D7 SINE Alu -6 114 1 8 1201 1149 64 0 0 chr17 80868535 80868676 -14403975 + B1_Mus1 SINE Alu 2 142 -6 8 1201 216 0 0 0 chr17 80868677 80868701 -14403950 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 8 1201 511 254 43 0 chr17 80868954 80869092 -14403559 + ID_B1 SINE B4 79 222 -2 8 1201 1070 193 39 0 chr17 80869471 80869678 -14402973 - B3 SINE B2 0 216 2 8 1201 314 273 0 0 chr17 80869806 80869872 -14402779 - RSINE1 SINE B4 0 165 100 8 1201 213 236 18 0 chr17 80869928 80869983 -14402668 + (CATG)n Simple_repeat Simple_repeat 4 59 0 8 1201 210 329 24 12 chr17 80870105 80870188 -14402463 + RSINE1 SINE B4 2 85 -80 8 1201 212 290 32 0 chr17 80870324 80870386 -14402265 + PB1D10 SINE Alu 47 110 -7 9 1201 959 261 16 8 chr17 80870853 80871104 -14401547 + LTR16B2 LTR ERVL 7 259 -203 9 1201 330 209 50 162 chr17 80871151 80871231 -14401420 - B3 SINE B2 -87 129 48 9 1201 293 226 204 0 chr17 80871254 80871347 -14401304 + B1F SINE Alu 37 148 -1 9 150 512 273 0 0 chr17 80871344 80871472 -14401179 + ID_B1 SINE B4 81 208 -16 9 1202 330 87 0 0 chr17 80871644 80871690 -14400961 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 9 1202 381 196 46 67 chr17 80871698 80871867 -14400784 + L1ME2z LINE L1 5239 5400 -764 9 1202 180 0 0 0 chr17 80871979 80871999 -14400652 + (TCTG)n Simple_repeat Simple_repeat 1 20 0 9 1202 225 0 0 0 chr17 80872014 80872039 -14400612 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 1202 273 29 0 0 chr17 80872039 80872073 -14400578 + (CA)n Simple_repeat Simple_repeat 1 34 0 9 1202 314 282 138 5 chr17 80872075 80872275 -14400376 + L1ME2z LINE L1 5371 5597 -762 9 1202 288 255 53 0 chr17 80872370 80872464 -14400187 + PB1D10 SINE Alu 15 113 -4 9 1202 478 264 99 0 chr17 80872481 80872602 -14400049 + RSINE1 SINE B4 33 165 0 9 1202 564 275 170 64 chr17 80872617 80872770 -14399881 + L1ME2z LINE L1 5691 5870 -574 9 1202 1593 41 5 0 chr17 80872770 80872964 -14399687 + L1_Mus1 LINE L1 6373 6567 0 9 1202 564 275 170 64 chr17 80872964 80873327 -14399324 + L1ME2z LINE L1 5871 6261 -183 9 1202 228 286 16 16 chr17 80873331 80873342 -14399309 + ID SINE ID 73 83 -141 9 1202 248 299 45 4 chr17 80873342 80873480 -14399171 + B1_Mur3 SINE Alu 2 147 0 9 1202 395 231 81 44 chr17 80873487 80873623 -14399028 + B1F SINE Alu 1 141 -8 9 1202 263 226 71 12 chr17 80873640 80873725 -14398926 + L1ME2z LINE L1 6293 6382 -62 9 1202 221 356 0 17 chr17 80874213 80874273 -14398378 - ID4_ SINE ID 0 83 25 9 1202 1180 68 0 0 chr17 80874446 80874592 -14398059 + B1_Mus2 SINE Alu 2 147 0 9 1202 327 283 42 50 chr17 80874911 80875030 -14397621 + PB1D7 SINE Alu 2 119 -1 9 1202 2581 48 0 0 chr17 80875037 80875351 -14397300 + L1_Mus1 LINE L1 6254 6567 0 9 1202 1350 83 10 20 chr17 80875671 80875867 -14396784 + B2_Mm2 SINE B2 2 195 0 9 1202 936 62 0 0 chr17 80876426 80876554 -14396097 + B1_Mm SINE Alu 20 147 0 9 1202 243 0 0 0 chr17 80876566 80876593 -14396058 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 1202 1182 55 0 0 chr17 80876955 80877101 -14395550 + B1_Mm SINE Alu 2 147 0 9 1202 1121 61 0 7 chr17 80877465 80877613 -14395038 + B1_Mus1 SINE Alu 2 148 0 9 1202 29 60 0 0 chr17 80879266 80879316 -14393335 + GC_rich Low_complexity Low_complexity 1 50 0 9 1202 28 29 0 0 chr17 80879337 80879372 -14393279 + GC_rich Low_complexity Low_complexity 1 35 0 9 1202 35 98 0 0 chr17 80879456 80879568 -14393083 + GC_rich Low_complexity Low_complexity 1 112 0 9 1202 240 163 0 0 chr17 80879719 80879762 -14392889 + (CCG)n Simple_repeat Simple_repeat 1 43 0 9 1202 249 0 73 0 chr17 80880154 80880195 -14392456 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 9 1202 391 278 26 19 chr17 80880868 80881022 -14391629 + RSINE1 SINE B4 5 159 -6 9 1202 375 292 43 21 chr17 80881212 80881352 -14391299 + ID_B1 SINE B4 81 223 -1 9 1202 180 0 0 0 chr17 80881645 80881665 -14390986 + (A)n Simple_repeat Simple_repeat 1 20 0 9 1202 736 132 137 15 chr17 80881790 80881921 -14390730 + B1_Mur2 SINE Alu 2 148 -1 9 1202 495 60 0 0 chr17 80883460 80883527 -14389124 + (TG)n Simple_repeat Simple_repeat 1 67 0 9 1202 243 0 0 0 chr17 80883527 80883553 -14389098 + (GA)n Simple_repeat Simple_repeat 1 27 0 9 1202 381 156 0 0 chr17 80883592 80883669 -14388982 + T-rich Low_complexity Low_complexity 1 77 0 9 1202 419 82 14 0 chr17 80883669 80883742 -14388909 + (TTGG)n Simple_repeat Simple_repeat 2 75 0 9 1202 1163 56 0 0 chr17 80883742 80883885 -14388766 - B1_Mm SINE Alu -3 144 2 9 1202 506 263 15 8 chr17 80883910 80884044 -14388607 - ID_B1 SINE B4 -12 212 78 9 1202 231 254 17 17 chr17 80884446 80884506 -14388145 - RSINE1 SINE B4 -105 60 1 9 1202 1188 62 0 0 chr17 80884895 80885040 -14387611 + B1_Mus2 SINE Alu 3 147 0 9 1202 545 248 56 7 chr17 80885059 80885201 -14387450 - ID_B1 SINE B4 -74 150 2 9 1202 320 274 74 74 chr17 80885219 80885258 -14387393 - L1MB2 LINE L1 -78 6093 6055 9 1202 461 238 48 0 chr17 80885258 80885363 -14387288 - PB1D10 SINE Alu -3 114 5 9 1202 320 274 74 74 chr17 80885363 80885512 -14387139 - L1MB2 LINE L1 -117 6054 5905 9 1202 671 203 31 0 chr17 80885551 80885679 -14386972 + B1_Mur1 SINE Alu 11 142 -7 9 1202 294 272 63 139 chr17 80885714 80885872 -14386779 - RSINE1 SINE B4 -4 161 16 9 1202 521 195 40 58 chr17 80885902 80885987 -14386664 - ORR1B1 LTR MaLR 0 394 313 9 1202 2076 176 48 14 chr17 80885987 80886491 -14386160 + RLTR31B_Mm LTR ERVK 1 497 -87 9 1202 1271 155 165 7 chr17 80886507 80886780 -14385871 - ORR1B1 LTR MaLR -78 316 1 9 1202 231 233 0 77 chr17 80886878 80886943 -14385708 - L1MB2 LINE L1 -289 5894 5835 9 1202 1306 14 0 0 chr17 80886984 80887131 -14385520 - B1_Mm SINE Alu 0 147 1 9 1202 354 281 45 30 chr17 80887141 80887154 -14385497 - B1F SINE Alu 0 149 18 9 1202 449 265 8 0 chr17 80887154 80887271 -14385380 - ID_B1 SINE B4 -8 216 99 9 1202 195 42 0 0 chr17 80887427 80887451 -14385200 + (GA)n Simple_repeat Simple_repeat 2 25 0 9 1202 458 65 25 38 chr17 80887475 80887555 -14385096 + B2_Mm2 SINE B2 108 186 -9 9 1202 298 290 32 16 chr17 80887630 80887756 -14384895 + MERVL_2A-int LTR ERVL 5343 5470 -291 9 1202 301 269 14 14 chr17 80887761 80887904 -14384747 + (TATATG)n Simple_repeat Simple_repeat 4 146 0 9 1202 282 217 56 42 chr17 80887978 80888050 -14384601 + MERVL_2A-int LTR ERVL 5547 5619 -138 9 1202 270 308 77 0 chr17 80888152 80888243 -14384408 - B1F SINE Alu -51 98 1 9 1202 1465 64 21 0 chr17 80889096 80889283 -14383368 + B2_Mm2 SINE B2 2 192 -3 9 1202 676 188 15 8 chr17 80889343 80889477 -14383174 - B1F SINE Alu -5 144 10 9 1202 1185 75 0 0 chr17 80890202 80890349 -14382302 - B1_Mus1 SINE Alu 0 148 2 9 1202 376 220 156 33 chr17 80890541 80890663 -14381988 + B1F SINE Alu 1 137 -12 9 1202 249 33 0 0 chr17 80890663 80890693 -14381958 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 9 1202 542 235 16 32 chr17 80890729 80890852 -14381799 - ID_B1 SINE B4 -2 222 102 9 1202 737 220 27 0 chr17 80890916 80891066 -14381585 - RSINE1 SINE B4 -9 156 3 9 1202 389 213 44 2 chr17 80891438 80891528 -14381123 + PB1D7 SINE Alu 27 124 -25 9 1202 1518 48 27 0 chr17 80891528 80891716 -14380935 - B2_Mm1a SINE B2 0 193 1 9 1202 340 263 78 17 chr17 80891716 80891741 -14380910 + B1F SINE Alu 125 149 0 9 1202 605 254 8 0 chr17 80891754 80891884 -14380767 + B1F SINE Alu 6 136 -13 9 1202 396 279 0 0 chr17 80891925 80892029 -14380622 + BC1_Mm scRNA scRNA 1 104 -48 9 1202 511 184 16 8 chr17 80892029 80892155 -14380496 + GA-rich Low_complexity Low_complexity 4 130 0 9 1202 553 265 23 8 chr17 80892266 80892399 -14380252 + ID_B1 SINE B4 82 216 -8 9 1202 390 280 194 0 chr17 80892403 80892578 -14380073 + ID_B1 SINE B4 13 221 -3 9 1202 1222 54 0 0 chr17 80892608 80892756 -14379895 + B1_Mus1 SINE Alu 1 148 0 9 1202 183 170 0 0 chr17 80892969 80893016 -14379635 + A-rich Low_complexity Low_complexity 1 47 0 9 1202 1336 91 11 11 chr17 80893035 80893224 -14379427 + B2_Mm1t SINE B2 1 189 -4 9 1202 477 214 61 0 chr17 80893286 80893384 -14379267 + B1_Mur2 SINE Alu 1 104 -45 9 1202 475 279 15 8 chr17 80893394 80893524 -14379127 - ORR1E LTR MaLR -215 144 14 9 1202 615 154 25 174 chr17 80893525 80893721 -14378930 - ORR1C2 LTR MaLR 0 384 218 9 1202 460 132 47 0 chr17 80893727 80893833 -14378818 + GA-rich Low_complexity Low_complexity 4 114 0 9 1202 1028 150 12 0 chr17 80893833 80894006 -14378645 - ORR1C2 LTR MaLR -197 187 13 9 1202 452 173 10 0 chr17 80894008 80894112 -14378539 - Lx LINE L1 0 6654 6550 9 1202 728 53 0 0 chr17 80894253 80894348 -14378303 - B1_Mus2 SINE Alu -52 95 1 9 1202 198 118 0 0 chr17 80894377 80894411 -14378240 + (TTTTC)n Simple_repeat Simple_repeat 3 36 0 9 1202 878 252 87 0 chr17 80894411 80894617 -14378034 - ID_B1 SINE B4 0 224 1 9 1202 334 214 0 0 chr17 80894643 80894713 -14377938 - ID4 SINE ID -13 70 1 9 1202 780 65 0 62 chr17 80894826 80894945 -14377706 + B1_Mus1 SINE Alu 27 139 -9 9 1202 253 0 26 26 chr17 80894945 80894983 -14377668 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 9 1202 401 202 79 0 chr17 80895962 80896051 -14376600 - PB1D9 SINE Alu -8 112 17 9 1202 385 130 279 39 chr17 80896138 80896242 -14376409 - B3 SINE B2 -86 130 2 9 1202 351 0 0 0 chr17 80896251 80896290 -14376361 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 1202 619 131 0 0 chr17 80896965 80897064 -14375587 + B2_Mm2 SINE B2 3 101 -94 9 1202 733 103 151 0 chr17 80897129 80897255 -14375396 + B1_Mus1 SINE Alu 3 147 -1 9 1202 306 108 74 86 chr17 80897406 80897487 -14375164 + B1F SINE Alu 67 146 -3 9 1202 213 180 0 0 chr17 80897487 80897537 -14375114 + (CATA)n Simple_repeat Simple_repeat 1 50 0 9 1202 932 212 64 5 chr17 80897668 80897872 -14374779 + B3 SINE B2 1 216 0 9 1202 378 0 0 0 chr17 80899260 80899302 -14373349 + (TG)n Simple_repeat Simple_repeat 2 43 0 9 1202 412 289 23 15 chr17 80899318 80899448 -14373203 - B3A SINE B2 -67 131 1 9 1202 344 250 9 44 chr17 80899468 80899581 -14373070 - PB1D7 SINE Alu 0 120 12 9 1202 240 215 119 79 chr17 80899651 80899752 -14372899 - B1F SINE Alu -7 113 9 9 1202 419 216 117 10 chr17 80899947 80900050 -14372601 - B3 SINE B2 -102 114 1 9 1202 284 310 16 96 chr17 80900114 80900239 -14372412 + B4A SINE B4 30 144 -148 9 1202 341 259 33 106 chr17 80900446 80900597 -14372054 - L1ME2 LINE L1 -66 6098 5959 1 1202 680 283 9 18 chr17 80900625 80900848 -14371803 + ID_B1 SINE B4 3 223 -1 1 1202 238 68 22 43 chr17 80901012 80901058 -14371593 + (GGGAGA)n Simple_repeat Simple_repeat 3 47 0 1 1202 449 270 26 39 chr17 80901095 80901274 -14371377 + B3A SINE B2 1 174 -19 1 1202 378 0 0 0 chr17 80901789 80901831 -14370820 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1202 215 278 184 53 chr17 80901831 80901907 -14370744 - PB1D7 SINE Alu -11 109 24 1 1202 385 250 157 8 chr17 80902157 80902278 -14370373 - B1F SINE Alu 0 149 11 1 1202 452 345 51 8 chr17 80902297 80902551 -14370100 - L1MB4 LINE L1 -75 6105 5841 1 1202 26 50 0 0 chr17 80902658 80902698 -14369953 + AT_rich Low_complexity Low_complexity 1 40 0 1 1202 297 182 0 0 chr17 80902728 80902768 -14369883 + A-rich Low_complexity Low_complexity 2 41 0 1 1202 1232 35 7 0 chr17 80902768 80902913 -14369738 + B1_Mus2 SINE Alu 1 146 -1 1 1202 297 182 0 0 chr17 80902913 80902949 -14369702 + A-rich Low_complexity Low_complexity 42 77 0 1 1202 253 288 0 91 chr17 80902993 80903081 -14369570 + ID4_ SINE ID 4 83 0 1 1202 459 225 481 5 chr17 80903215 80903404 -14369247 + B4A SINE B4 4 282 -10 1 1202 889 246 62 131 chr17 80903563 80904009 -14368642 + MTD LTR MaLR 5 405 -14 1 1202 1458 68 11 0 chr17 80904207 80904397 -14368254 + B2_Mm1t SINE B2 2 193 0 1 1202 495 252 35 0 chr17 80904531 80904646 -14368005 + RSINE1 SINE B4 3 121 -44 1 1202 210 286 0 31 chr17 80904661 80904726 -14367925 + ID SINE ID 11 73 -151 1 1202 1063 247 150 6 chr17 80904782 80905136 -14367515 + MTD LTR MaLR 1 405 -14 1 1202 300 289 0 0 chr17 80905586 80905662 -14366989 - ID4_ SINE ID -4 79 4 1 1202 1361 103 113 0 chr17 80906488 80906691 -14365960 + URR1A DNA MER1_type 1 226 0 1 1202 2076 91 0 4 chr17 80906996 80907271 -14365380 + L1VL4 LINE L1 184 457 -5845 1 1202 3451 51 32 2 chr17 80907277 80907750 -14364901 + MusHAL1 LINE L1 161 647 -2065 1 1202 6595 128 49 18 chr17 80907745 80908929 -14363722 + Lx2 LINE L1 5673 6648 -349 1 1202 270 315 93 27 chr17 80908947 80909097 -14363554 + RSINE1 SINE B4 6 165 0 1 1202 334 304 120 102 chr17 80909147 80909547 -14363104 - Charlie7 DNA MER1_type -658 1954 1548 1 1202 515 189 221 33 chr17 80909682 80909863 -14362788 + B3 SINE B2 2 216 0 1 1202 467 290 158 7 chr17 80909949 80910095 -14362556 + B3A SINE B2 1 168 -30 1 1202 218 105 26 0 chr17 80910099 80910137 -14362514 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1202 300 198 0 113 chr17 80910150 80910247 -14362404 + MT2B LTR ERVL 162 247 -354 1 1202 586 184 0 0 chr17 80910163 80910266 -14362385 + PB1D9 SINE Alu 11 113 -7 1 1202 259 292 42 0 chr17 80910359 80910431 -14362220 - B1F1 SINE Alu -66 83 9 1 1202 1439 73 5 0 chr17 80910441 80910632 -14362019 - B2_Mm1a SINE B2 0 193 2 1 1202 23 0 0 0 chr17 80910635 80910658 -14361993 + AT_rich Low_complexity Low_complexity 1 23 0 1 1202 189 0 0 0 chr17 80910663 80910684 -14361967 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1 1202 699 159 0 0 chr17 80910684 80910797 -14361854 - B1_Mur4 SINE Alu -8 142 30 1 1202 507 269 0 0 chr17 80910875 80910994 -14361657 + ID_B1 SINE B4 106 224 0 1 1202 1414 46 11 17 chr17 80911021 80911199 -14361452 + B2_Mm2 SINE B2 1 177 -18 1 1202 882 108 8 0 chr17 80911200 80911329 -14361322 + B2_Mm1t SINE B2 2 131 -62 1 1202 881 53 105 0 chr17 80911328 80911461 -14361190 + B2_Mm2 SINE B2 35 181 -14 1 1202 503 278 94 6 chr17 80911502 80911672 -14360979 + B3 SINE B2 27 211 -5 1 1202 1811 286 71 47 chr17 80912062 80912636 -14360015 + Lx9 LINE L1 6742 7315 -329 1 1202 570 153 371 24 chr17 80912636 80912803 -14359848 - URR1B DNA MER1_type 0 225 1 1 1202 1811 286 71 47 chr17 80912803 80912928 -14359723 + Lx9 LINE L1 7316 7458 -186 1 1202 262 358 37 0 chr17 80912963 80913072 -14359579 + MLT1H LTR MaLR 114 226 -323 1 1202 1172 259 75 77 chr17 80913667 80914073 -14358578 - MTD LTR MaLR 0 419 14 1 1202 213 39 0 0 chr17 80914073 80914099 -14358552 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 1202 412 289 0 8 chr17 80914622 80914744 -14357907 + RSINE1 SINE B4 8 128 -37 1 1202 399 348 32 37 chr17 80914879 80915097 -14357554 + B4A SINE B4 1 217 -75 1 1202 1170 68 0 0 chr17 80916218 80916365 -14356286 - B1_Mm SINE Alu 0 147 1 1 1202 180 0 0 0 chr17 80916449 80916469 -14356182 + (ATTG)n Simple_repeat Simple_repeat 4 23 0 1 1202 361 239 0 21 chr17 80916897 80916991 -14355660 - ID_B1 SINE B4 -8 216 125 1 1202 1748 183 54 37 chr17 80917076 80917494 -14355157 - MTD LTR MaLR -8 411 1 1 1202 332 226 85 11 chr17 80917544 80917638 -14355013 - B3A SINE B2 -97 101 1 1 1202 538 207 8 32 chr17 80917638 80917763 -14354888 - L1MD3 LINE L1 -328 7667 7546 1 1202 315 274 244 17 chr17 80918291 80918410 -14354241 + RSINE1 SINE B4 2 147 -18 1 1202 324 70 0 0 chr17 80918415 80918458 -14354193 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1202 719 218 18 17 chr17 80918471 80918666 -14353985 + L1MA6 LINE L1 5673 5866 -434 1 1202 311 0 0 25 chr17 80918703 80918743 -14353908 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1202 773 225 68 0 chr17 80919032 80919223 -14353428 + ID_B1 SINE B4 13 216 -8 1 1202 230 149 85 0 chr17 80919182 80919229 -14353422 + PB1D7 SINE Alu 68 118 -2 1 1202 1088 90 0 0 chr17 80919394 80919538 -14353113 + B1_Mus1 SINE Alu 2 145 -3 1 1202 1297 74 3 3 chr17 80919538 80919835 -14352816 + (GAAA)n Simple_repeat Simple_repeat 1 297 0 1 1202 244 297 86 57 chr17 80919981 80920156 -14352495 + L1M5 LINE L1 5508 5687 -437 1 1202 743 231 142 6 chr17 80920257 80920440 -14352211 - B3 SINE B2 -5 211 4 1 1202 222 118 0 0 chr17 80920663 80920697 -14351954 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1202 191 171 0 67 chr17 80921110 80921185 -14351466 + T-rich Low_complexity Low_complexity 5 74 0 1 1202 404 256 42 42 chr17 80921342 80921485 -14351166 + ID_B1 SINE B4 77 219 -5 1 1202 225 0 0 0 chr17 80921485 80921510 -14351141 + (CAG)n Simple_repeat Simple_repeat 2 26 0 1 1202 213 196 0 0 chr17 80922073 80922119 -14350532 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 1 1202 477 239 0 0 chr17 80922243 80922381 -14350270 + (CA)n Simple_repeat Simple_repeat 1 138 0 1 1202 299 278 210 30 chr17 80923374 80923541 -14349110 - ID_B1 SINE B4 -26 198 2 1 1202 225 143 0 0 chr17 80923814 80923849 -14348802 - PB1D10 SINE Alu -12 105 71 1 1202 26704 132 20 14 chr17 80924895 80931158 -14341493 + Lx2 LINE L1 356 6645 -352 1 1202 1370 137 18 0 chr17 80931156 80931375 -14341276 + Lx2 LINE L1 6775 6997 0 1 1202 382 312 0 0 chr17 80932816 80932909 -14339742 + PB1 SINE Alu 8 100 -27 1 1202 235 220 68 0 chr17 80933391 80933450 -14339201 + ID4 SINE ID 8 70 -13 1 1202 460 267 107 0 chr17 80933470 80933601 -14339050 + RSINE1 SINE B4 15 159 -6 1 1202 625 266 36 129 chr17 80933814 80934094 -14338557 - MTE2a LTR MaLR -125 254 1 1 1202 334 228 59 42 chr17 80934489 80934608 -14338043 - RSINE1 SINE B4 -37 128 8 1 1202 276 130 0 0 chr17 80934836 80934882 -14337769 + (TATG)n Simple_repeat Simple_repeat 3 48 0 1 1202 262 312 0 0 chr17 80935393 80935470 -14337181 + (TG)n Simple_repeat Simple_repeat 2 78 0 1 1202 1208 41 0 0 chr17 80935678 80935816 -14336835 + B1_Mus2 SINE Alu 1 138 -9 1 1202 570 15 0 0 chr17 80935816 80935883 -14336768 + (CAAAC)n Simple_repeat Simple_repeat 2 68 0 1 1202 2510 124 19 43 chr17 80935933 80936398 -14336253 - RMER6B LTR ERVK -7 454 1 1 1202 390 262 106 8 chr17 80936704 80936827 -14335824 - B1F SINE Alu -8 141 7 1 1202 4093 105 59 21 chr17 80936977 80937694 -14334957 - RMER6A LTR ERVK -12 744 1 1 1202 320 267 47 0 chr17 80937762 80937848 -14334803 - PB1D7 SINE Alu -16 104 15 1 1202 24 0 0 0 chr17 80938124 80938148 -14334503 + AT_rich Low_complexity Low_complexity 1 24 0 1 1202 373 282 187 22 chr17 80938200 80938425 -14334226 - B4A SINE B4 -21 271 10 1 1202 429 221 109 51 chr17 80938454 80938592 -14334059 - B1F1 SINE Alu -1 148 3 1 1202 274 259 136 0 chr17 80938606 80938687 -14333964 - PB1 SINE Alu -7 120 29 1 1202 357 150 33 7 chr17 80939113 80939190 -14333461 - RLTR20A1 LTR ERVK -443 108 3 1 1202 213 89 62 62 chr17 80939325 80939373 -14333278 - PB1D7 SINE Alu 0 120 73 1 1202 287 167 167 0 chr17 80939330 80939396 -14333255 - ID_B1 SINE B4 -2 222 146 1 1202 1817 234 34 5 chr17 80939405 80939788 -14332863 - Lx5 LINE L1 -11 7039 6646 1 1202 275 293 19 48 chr17 80939789 80939893 -14332758 - PB1D9 SINE Alu -19 101 1 1 1202 411 312 28 21 chr17 80939893 80939955 -14332696 - ID SINE ID -146 78 16 1 1202 193 256 279 0 chr17 80939979 80940065 -14332586 - MIRb SINE MIR -114 154 45 1 1202 302 0 26 0 chr17 80940475 80940513 -14332138 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1202 183 100 0 0 chr17 80940548 80940578 -14332073 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1202 198 0 0 0 chr17 80940594 80940616 -14332035 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1 1202 1102 82 0 0 chr17 80940616 80940762 -14331889 - B1_Mus1 SINE Alu -2 146 1 1 1202 582 263 0 7 chr17 80940762 80940899 -14331752 - B1_Mur1 SINE Alu -10 139 3 1 1202 486 49 0 0 chr17 80940958 80941019 -14331632 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 1202 26 30 0 0 chr17 80941019 80941052 -14331599 + AT_rich Low_complexity Low_complexity 1 33 0 1 1202 1513 265 148 79 chr17 80941056 80941815 -14330836 + Lx9 LINE L1 6645 7486 -158 1 1202 378 0 0 0 chr17 80941815 80941857 -14330794 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1202 2364 138 75 27 chr17 80941858 80942259 -14330392 - MTC LTR MaLR -1 420 1 1 1202 1513 265 148 79 chr17 80942259 80942429 -14330222 + Lx9 LINE L1 7487 7640 -4 1 1202 499 212 26 9 chr17 80942542 80942656 -14329995 - B3A SINE B2 -80 118 3 1 1202 519 117 0 31 chr17 80943380 80943477 -14329174 - B2_Mm1a SINE B2 -1 192 99 1 1202 577 227 8 30 chr17 80943506 80943638 -14329013 - B3 SINE B2 -86 130 2 1 1202 462 283 13 32 chr17 80943679 80943836 -14328815 + MLT1C LTR MaLR 9 162 -305 1 1202 274 23 23 23 chr17 80943908 80943952 -14328699 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 1202 693 277 8 74 chr17 80944100 80944342 -14328309 - B4 SINE B4 -66 226 1 1 1202 656 257 7 0 chr17 80944873 80945021 -14327630 + RSINE1 SINE B4 4 152 -13 1 1202 853 203 0 0 chr17 80945053 80945201 -14327450 - B1_Mur3 SINE Alu 0 149 2 1 1202 477 162 64 45 chr17 80945203 80945313 -14327338 - PB1D9 SINE Alu 0 120 9 1 1202 212 369 19 0 chr17 80945316 80945419 -14327232 - PB1D10 SINE Alu -10 107 3 1 1202 753 187 143 37 chr17 80945579 80945768 -14326883 - ID_B1 SINE B4 0 224 16 1 1202 208 79 77 26 chr17 80945929 80945968 -14326683 + C-rich Low_complexity Low_complexity 1 41 0 1 1202 266 305 18 74 chr17 80946033 80946150 -14326501 - B4 SINE B4 -151 141 36 1 1202 903 121 6 63 chr17 80947309 80947468 -14325183 + B1_Mur4 SINE Alu 1 150 0 1 1202 473 279 7 41 chr17 80947836 80947982 -14324669 + RSINE1 SINE B4 5 145 -20 1 1202 1057 222 9 46 chr17 80948405 80948622 -14324029 + B3 SINE B2 2 210 -6 1 1202 1166 60 20 7 chr17 80948837 80948989 -14323662 - Lx3A LINE L1 -480 6501 6348 1 1202 439 92 145 0 chr17 80948990 80949066 -14323585 - BC1_Mm scRNA scRNA -59 93 7 1 1202 698 112 0 0 chr17 80949076 80949174 -14323477 - Lx3A LINE L1 -625 6356 6259 1 1202 216 0 0 0 chr17 80949371 80949395 -14323256 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1202 303 326 29 6 chr17 80949468 80949641 -14323010 + (CA)n Simple_repeat Simple_repeat 2 178 0 1 1202 648 166 0 0 chr17 80949659 80949798 -14322853 + (CACG)n Simple_repeat Simple_repeat 1 139 0 1 1202 31 44 0 0 chr17 80949882 80949927 -14322724 + AT_rich Low_complexity Low_complexity 1 45 0 1 1202 343 221 29 0 chr17 80950669 80950737 -14321914 + ID_B1 SINE B4 145 214 -10 1 1202 234 136 0 0 chr17 80950837 80950881 -14321770 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1202 488 322 94 43 chr17 80950887 80951163 -14321488 - B4A SINE B4 -1 291 2 1 1202 489 62 24 24 chr17 80951191 80951274 -14321377 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 1 1202 1612 27 0 26 chr17 80951291 80951483 -14321168 - B2_Mm1t SINE B2 -6 187 1 1 1202 322 268 0 12 chr17 80951825 80951908 -14320743 - RSINE1 SINE B4 -43 122 41 1 1202 213 283 0 0 chr17 80953407 80953453 -14319198 + (CGTG)n Simple_repeat Simple_repeat 4 49 0 1 1202 537 121 0 0 chr17 80953454 80953537 -14319114 + (GA)n Simple_repeat Simple_repeat 2 84 0 1 1202 218 176 0 19 chr17 80953556 80953608 -14319043 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 1202 26 93 0 0 chr17 80953707 80953782 -14318869 + AT_rich Low_complexity Low_complexity 1 75 0 1 1202 225 94 0 0 chr17 80953785 80953817 -14318834 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1202 500 294 49 7 chr17 80953827 80953971 -14318680 - B3A SINE B2 -47 151 2 1 1202 398 287 20 47 chr17 80953971 80954104 -14318547 - B4A SINE B4 -71 221 93 1 1202 320 219 0 24 chr17 80954406 80954490 -14318161 - ID4 SINE ID 0 83 2 1 1202 270 254 0 15 chr17 80954501 80954569 -14318082 - PB1D10 SINE Alu -9 108 42 1 1202 1375 82 16 11 chr17 80954916 80955102 -14317549 - B2_Mm2 SINE B2 -8 187 1 1 1202 839 196 79 20 chr17 80955124 80955327 -14317324 - B3 SINE B2 -1 215 1 1 1202 217 118 18 73 chr17 80955523 80955578 -14317073 + (CTGGGG)n Simple_repeat Simple_repeat 2 53 0 1 1202 268 157 39 0 chr17 80955945 80955996 -14316655 - B4A SINE B4 0 292 240 1 1202 1255 34 0 0 chr17 80956005 80956152 -14316499 - B1_Mus2 SINE Alu 0 147 1 1 1202 569 278 38 50 chr17 80956221 80956380 -14316271 - RSINE1 SINE B4 -1 164 8 1 1202 726 299 13 25 chr17 80956383 80956620 -14316031 - B4A SINE B4 -58 234 1 1 1202 781 216 42 10 chr17 80956928 80957120 -14315531 - B3A SINE B2 0 198 1 1 1202 23 78 0 0 chr17 80957394 80957445 -14315206 + AT_rich Low_complexity Low_complexity 1 51 0 1 1202 294 29 0 0 chr17 80957449 80957484 -14315167 + (TATG)n Simple_repeat Simple_repeat 4 38 0 1 1202 390 179 375 0 chr17 80957484 80957596 -14315055 - B3 SINE B2 -62 154 1 1 1202 26 50 0 0 chr17 80958661 80958701 -14313950 + AT_rich Low_complexity Low_complexity 1 40 0 1 1202 280 316 51 19 chr17 80958845 80959003 -14313648 + MER5A1 DNA MER1_type 2 164 -2 1 1202 1110 37 0 0 chr17 80959475 80959610 -14313041 + B1_Mus1 SINE Alu 2 136 -12 1 1202 207 0 0 0 chr17 80960412 80960435 -14312216 + (TTG)n Simple_repeat Simple_repeat 3 25 0 1 1202 288 0 0 0 chr17 80960529 80960561 -14312090 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1202 385 303 30 8 chr17 80960561 80960694 -14311957 - RSINE1 SINE B4 -26 139 4 1 1202 583 78 0 22 chr17 80960713 80960805 -14311846 + (TTTC)n Simple_repeat Simple_repeat 1 90 0 1 1202 668 142 18 0 chr17 80960815 80960928 -14311723 - B1_Mus2 SINE Alu -1 146 32 1 1202 3515 25 2 0 chr17 80961469 80961864 -14310787 - MTA_Mm LTR MaLR 0 396 1 1 1202 6038 150 70 48 chr17 80961932 80963150 -14309501 + RMER17C-int LTR ERVK 1478 2722 -516 1 1202 1370 84 185 0 chr17 80963207 80963456 -14309195 + RLTR10A LTR ERVK 117 411 0 1 1202 1333 75 0 23 chr17 80963458 80963635 -14309016 + RLTR10-int LTR ERVK 304 476 -1511 1 1202 362 312 40 27 chr17 80963760 80963984 -14308667 + IAP-d-int LTR ERVK 286 512 -6030 1 1202 1049 128 21 38 chr17 80964093 80964279 -14308372 + IAP-d-int LTR ERVK 810 992 -995 1 1202 4091 318 35 38 chr17 80964322 80967154 -14305497 + IAP-d-int LTR ERVK 1245 4028 -2514 1 1202 1368 78 184 0 chr17 80967249 80967494 -14305157 + RLTR10A LTR ERVK 122 411 0 1 1202 686 93 99 25 chr17 80967494 80967615 -14305036 + RMER17C-int LTR ERVK 2717 2846 -392 1 1202 465 19 0 0 chr17 80967616 80967670 -14304981 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1202 1321 109 38 50 chr17 80967670 80967962 -14304689 + RMER17C-int LTR ERVK 2903 3238 0 1 1202 1631 163 33 82 chr17 80967962 80968365 -14304286 + RMER17C LTR ERVK 1 378 -32 1 1202 345 24 0 0 chr17 80968365 80968407 -14304244 + (TC)n Simple_repeat Simple_repeat 2 43 0 1 1202 1127 63 14 0 chr17 80968407 80968549 -14304102 - B1_Mus2 SINE Alu -3 144 1 1 1202 1631 163 33 82 chr17 80968549 80968571 -14304080 + RMER17C LTR ERVK 379 405 -5 1 1202 509 235 143 36 chr17 80968709 80968877 -14303774 + ID_B1 SINE B4 1 186 -38 1 1202 329 310 43 17 chr17 80968775 80968890 -14303761 + B1F1 SINE Alu 7 124 -25 1 1202 21 0 0 0 chr17 80969038 80969059 -14303592 + AT_rich Low_complexity Low_complexity 1 21 0 1 1202 798 177 10 93 chr17 80969149 80969177 -14303474 - B2_Mm2 SINE B2 -6 189 163 1 1202 261 0 0 0 chr17 80969177 80969206 -14303445 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 1 1202 798 177 10 93 chr17 80969206 80969286 -14303365 - B2_Mm2 SINE B2 -33 162 97 1 1202 2939 27 0 0 chr17 80969286 80969623 -14303028 + L1Md_F3 LINE L1 6246 6582 -2 1 1202 798 177 10 93 chr17 80969623 80969718 -14302933 - B2_Mm2 SINE B2 -99 96 3 1 1202 2160 114 93 11 chr17 80969942 80970306 -14302345 + ORR1B1 LTR MaLR 1 394 0 1 1202 435 250 58 0 chr17 80970310 80970414 -14302237 - ID_B1 SINE B4 -35 189 80 1 1202 540 223 18 0 chr17 80970613 80970725 -14301926 + B1_Mur1 SINE Alu 33 146 -3 1 1202 3347 38 5 2 chr17 80971165 80971560 -14301091 + MTA_Mm LTR MaLR 1 396 0 1 1202 256 344 46 7 chr17 80971713 80971865 -14300786 + L1M4 LINE L1 901 1058 -5587 1 1202 472 218 18 155 chr17 80971967 80972135 -14300516 - RSINE1 SINE B4 0 165 21 1 1202 321 307 74 69 chr17 80972152 80972327 -14300324 + L1M4 LINE L1 1470 1645 -4897 1 1202 1217 246 143 38 chr17 80972605 80973208 -14299443 + L1M4 LINE L1 3893 4558 -2086 1 1202 253 167 152 0 chr17 80973268 80973334 -14299317 - PB1D9 SINE Alu 0 120 45 1 1202 275 278 178 25 chr17 80973390 80973614 -14299037 + L1M4 LINE L1 4624 4883 -1761 1 1202 225 294 146 10 chr17 80973700 80973803 -14298848 - MLT1A0 LTR MaLR 0 408 292 1 1202 328 235 83 56 chr17 80973897 80974005 -14298646 - MLT1A0 LTR MaLR -252 113 3 1 1202 316 279 43 2 chr17 80974013 80974122 -14298529 + L1M4 LINE L1 5342 5453 -1185 1 1202 246 268 0 14 chr17 80974147 80974219 -14298432 + PB1 SINE Alu 52 122 -5 1 1202 207 110 66 40 chr17 80974239 80974315 -14298336 + A-rich Low_complexity Low_complexity 3 80 0 1 1202 269 169 112 38 chr17 80974483 80974563 -14298088 + L1MC4 LINE L1 7543 7628 -414 1 1202 307 308 43 57 chr17 80974748 80974889 -14297762 + RSINE1 SINE B4 15 153 -12 1 1202 726 243 6 26 chr17 80974912 80975131 -14297520 - B3A SINE B2 0 216 10 1 1202 225 233 26 64 chr17 80975062 80975140 -14297511 - B4A SINE B4 -213 79 5 1 1202 690 12 0 0 chr17 80975781 80975866 -14296785 + L1Md_A LINE L1 6498 6582 0 1 1202 213 121 0 0 chr17 80977146 80977179 -14295472 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1202 351 0 0 0 chr17 80977190 80977229 -14295422 + (TATG)n Simple_repeat Simple_repeat 2 40 0 1 1202 200 35 35 0 chr17 80977495 80977524 -14295127 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1202 305 302 126 50 chr17 80977533 80977732 -14294919 - B4 SINE B4 -76 216 3 1 1202 568 165 36 27 chr17 80977733 80977845 -14294806 - B1_Mur2 SINE Alu -14 135 23 1 1202 427 184 69 0 chr17 80977871 80977958 -14294693 - ID_B1 SINE B4 -6 218 126 1 1202 405 198 0 0 chr17 80978275 80978371 -14294280 + (TA)n Simple_repeat Simple_repeat 2 97 0 1 1202 297 331 64 17 chr17 80979446 80979618 -14293033 - MER58A DNA MER1_type -17 207 28 1 1202 22 0 0 0 chr17 80980714 80980736 -14291915 + AT_rich Low_complexity Low_complexity 1 22 0 1 1202 224 59 29 0 chr17 80981612 80981646 -14291005 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1 1202 444 257 35 0 chr17 80982021 80982134 -14290517 - PB1D10 SINE Alu 0 117 1 1 1202 929 162 17 0 chr17 80983608 80983781 -14288870 + URR1B DNA MER1_type 50 225 0 1 1202 294 333 37 19 chr17 80983911 80984018 -14288633 - PB1 SINE Alu -18 109 1 1 1202 8617 107 43 55 chr17 80984803 80985806 -14286845 - Lx2 LINE L1 -1 6996 6012 1 1202 1325 98 5 21 chr17 80985806 80985994 -14286657 - B2_Mm1a SINE B2 -8 185 1 1 1202 17987 164 97 23 chr17 80985994 80991050 -14281601 - Lx2 LINE L1 -986 6011 539 1 1202 2033 119 31 19 chr17 80991428 80991753 -14280898 + ORR1A4 LTR MaLR 1 329 0 1 1202 589 220 55 28 chr17 80991811 80991956 -14280695 - B1F SINE Alu 0 149 1 1 1202 257 75 0 24 chr17 80992967 80993008 -14279643 + (TATATG)n Simple_repeat Simple_repeat 6 45 0 1 1202 612 243 229 0 chr17 80993029 80993247 -14279404 - B4A SINE B4 -16 276 9 1 1202 503 246 32 0 chr17 80993855 80993981 -14278670 - B1F SINE Alu -14 135 6 1 1202 724 197 0 0 chr17 80994161 80994288 -14278363 - ID_B1 SINE B4 -19 205 79 1 1202 21 71 0 0 chr17 80994569 80994611 -14278040 + AT_rich Low_complexity Low_complexity 1 42 0 1 1202 842 165 94 47 chr17 80994812 80995003 -14277648 - B3 SINE B2 -11 205 6 1 1202 418 267 9 9 chr17 80995343 80995449 -14277202 - PB1D10 SINE Alu -10 107 2 1 1202 627 256 73 42 chr17 80995781 80995973 -14276678 - B3A SINE B2 0 198 1 1 1202 367 296 5 133 chr17 80996210 80996267 -14276384 + ORR1E LTR MaLR 2 52 -307 1 1202 644 227 46 13 chr17 80996267 80996419 -14276232 - RSINE1 SINE B4 -6 159 3 1 1202 367 296 5 133 chr17 80996419 80996556 -14276095 + ORR1E LTR MaLR 53 171 -188 1 1202 309 246 14 0 chr17 80996679 80996748 -14275903 - RLTR17 LTR ERVK -419 273 204 1 1202 24 32 0 0 chr17 80997607 80997638 -14275013 + AT_rich Low_complexity Low_complexity 1 31 0 1 1202 474 132 0 0 chr17 80997793 80997869 -14274782 + (GAAAA)n Simple_repeat Simple_repeat 2 77 0 1 1202 189 0 0 0 chr17 80998329 80998350 -14274301 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 1202 261 226 11 21 chr17 80998446 80998541 -14274110 - MER65-int LTR ERV1 -4448 423 330 1 1202 365 278 46 31 chr17 80999069 80999199 -14273452 - B1F1 SINE Alu -15 134 3 1 1202 651 177 26 0 chr17 80999237 80999349 -14273302 - B3 SINE B2 -9 207 93 1 1202 1987 81 37 0 chr17 80999349 80999646 -14273005 + MT2B2 LTR ERVL 1 308 -276 1 1202 442 137 0 27 chr17 80999649 80999724 -14272927 + MT2B2 LTR ERVL 504 576 -8 1 1202 412 213 0 0 chr17 80999738 80999813 -14272838 - B3 SINE B2 -141 75 1 1 1202 22 0 0 0 chr17 80999831 80999853 -14272798 + AT_rich Low_complexity Low_complexity 1 22 0 1 1202 202 179 36 0 chr17 81000014 81000070 -14272581 + CT-rich Low_complexity Low_complexity 2 59 0 1 1202 208 91 45 0 chr17 81000668 81000712 -14271939 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1202 898 35 0 0 chr17 81001830 81001944 -14270707 + B1_Mus1 SINE Alu 25 138 -10 3 1203 351 0 0 0 chr17 81003569 81003608 -14269043 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1203 327 93 44 53 chr17 81003768 81003881 -14268770 + (TA)n Simple_repeat Simple_repeat 1 112 0 5 1203 645 253 5 67 chr17 81004074 81004269 -14268382 + B3A SINE B2 16 198 0 6 1203 228 182 0 0 chr17 81004414 81004458 -14268193 + (CACG)n Simple_repeat Simple_repeat 2 45 0 7 1203 255 292 61 9 chr17 81005910 81006024 -14266627 + MER5A DNA MER1_type 1 120 -69 8 1203 30 27 0 0 chr17 81006894 81006931 -14265720 + AT_rich Low_complexity Low_complexity 1 37 0 9 1203 788 234 26 0 chr17 81006960 81007152 -14265499 + B3 SINE B2 2 198 -18 1 1203 312 231 15 0 chr17 81007328 81007393 -14265258 - ID4_ SINE ID 0 83 18 1 1203 234 91 0 0 chr17 81007575 81007608 -14265043 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1203 317 269 12 124 chr17 81007612 81007773 -14264878 - RSINE1 SINE B4 0 165 23 1 1203 760 250 5 0 chr17 81007786 81007970 -14264681 - B3 SINE B2 -9 207 23 1 1203 411 290 49 68 chr17 81008012 81008219 -14264432 - B3A SINE B2 -7 209 11 1 1203 321 230 128 64 chr17 81008509 81008681 -14263970 + RMER21B LTR ERV1 295 477 -365 1 1203 1600 176 123 6 chr17 81009505 81009847 -14262804 + ORR1C2 LTR MaLR 1 382 -2 1 1203 489 274 48 18 chr17 81009965 81010132 -14262519 + ID_B1 SINE B4 49 220 -4 1 1203 483 136 0 58 chr17 81010154 81010240 -14262411 + B3 SINE B2 50 130 -86 1 1203 29 0 0 0 chr17 81010276 81010305 -14262346 + AT_rich Low_complexity Low_complexity 1 29 0 2 1203 509 217 0 19 chr17 81011163 81011271 -14261380 + B3 SINE B2 25 130 -86 2 1203 240 59 0 0 chr17 81011308 81011342 -14261309 + (CAAAC)n Simple_repeat Simple_repeat 2 35 0 2 1203 758 119 8 38 chr17 81011887 81012018 -14260633 + B1_Mur4 SINE Alu 24 150 0 2 1203 1613 22 22 0 chr17 81012181 81012364 -14260287 + B2_Mm1t SINE B2 1 187 -6 2 1203 382 318 47 16 chr17 81012449 81012577 -14260074 + RSINE1 SINE B4 12 143 -22 2 1203 441 0 0 0 chr17 81012582 81012631 -14260020 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1203 789 239 17 0 chr17 81013951 81014127 -14258524 + B3 SINE B2 2 180 -36 2 1203 23 33 0 0 chr17 81015908 81015938 -14256713 + AT_rich Low_complexity Low_complexity 1 30 0 2 1203 455 269 178 0 chr17 81016270 81016512 -14256139 - MTE2b LTR MaLR -88 291 7 2 1203 240 86 0 0 chr17 81016558 81016593 -14256058 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1203 507 188 155 68 chr17 81019308 81019514 -14253137 + Charlie1b DNA MER1_type 109 332 -191 3 1203 1091 63 42 0 chr17 81019633 81019775 -14252876 - B1_Mus1 SINE Alu 0 148 1 3 1203 243 0 0 0 chr17 81019843 81019870 -14252781 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 3 1203 306 0 0 0 chr17 81020272 81020306 -14252345 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 1203 469 207 92 69 chr17 81020316 81020446 -14252205 - ID_B1 SINE B4 -28 196 64 3 1203 447 204 11 63 chr17 81022224 81022372 -14250279 + PB1D9 SINE Alu 9 141 -8 3 1203 28 0 0 0 chr17 81023322 81023350 -14249301 + AT_rich Low_complexity Low_complexity 1 28 0 3 1203 225 0 0 0 chr17 81023774 81023799 -14248852 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 1203 180 0 0 0 chr17 81026014 81026034 -14246617 + (CAGA)n Simple_repeat Simple_repeat 2 21 0 3 1203 271 254 0 0 chr17 81026366 81026421 -14246230 + B1F1 SINE Alu 1 55 -94 4 1203 541 275 23 0 chr17 81027171 81027302 -14245349 - B1F SINE Alu -15 134 1 4 1203 33 73 0 0 chr17 81028177 81028245 -14244406 + AT_rich Low_complexity Low_complexity 1 68 0 4 1203 261 119 0 0 chr17 81028252 81028294 -14244357 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1203 332 156 0 15 chr17 81029859 81029924 -14242727 - PB1D10 SINE Alu -2 115 52 4 1203 263 319 56 28 chr17 81030369 81030509 -14242142 + MLT1F1 LTR MaLR 317 460 -109 4 1203 343 170 19 130 chr17 81030509 81030617 -14242034 + ORR1C2 LTR MaLR 1 96 -271 4 1203 2123 186 78 8 chr17 81030606 81031079 -14241572 + ORR1C2-int LTR MaLR 823 1328 -181 4 1203 1092 146 81 4 chr17 81031107 81031353 -14241298 + ORR1C2 LTR MaLR 1 290 -84 4 1203 2091 124 103 0 chr17 81031353 81031701 -14240950 + ORR1C2 LTR MaLR 1 384 0 4 1203 1067 193 152 42 chr17 81031701 81031789 -14240862 + ORR1C2 LTR MaLR 291 371 -3 4 1203 272 151 19 0 chr17 81032031 81032084 -14240567 + PB1D10 SINE Alu 64 117 0 4 1203 729 196 0 13 chr17 81032226 81032376 -14240275 + B3 SINE B2 2 149 -67 4 1203 2468 131 42 40 chr17 81032376 81032876 -14239775 + RLTR31A_Mm LTR ERVK 1 501 -83 5 1203 1437 49 60 0 chr17 81034320 81034504 -14238147 - B2_Mm2 SINE B2 0 195 1 5 1203 1858 178 53 15 chr17 81034876 81035270 -14237381 + MTD LTR MaLR 11 419 0 5 1203 247 146 0 0 chr17 81035348 81035389 -14237262 + MTD LTR MaLR 379 419 0 5 1203 1533 38 0 21 chr17 81036184 81036374 -14236277 - B2_Mm1a SINE B2 -6 187 2 5 1203 287 297 56 56 chr17 81036682 81036807 -14235844 + PB1 SINE Alu 1 125 -2 5 1203 448 207 32 32 chr17 81036873 81036998 -14235653 - RSINE1 SINE B4 -28 137 13 5 1203 319 354 26 9 chr17 81038406 81038520 -14234131 - ID_B1 SINE B4 -25 199 84 5 1203 264 310 161 0 chr17 81038786 81038873 -14233778 - PB1D10 SINE Alu -15 102 2 5 1203 250 309 121 8 chr17 81038875 81038999 -14233652 + MER20 DNA MER1_type 2 139 -80 5 1203 204 40 0 0 chr17 81039473 81039498 -14233153 + (TCCC)n Simple_repeat Simple_repeat 1 25 0 6 1203 1575 211 89 28 chr17 81039508 81039902 -14232749 + MTD LTR MaLR 2 419 0 6 1203 403 240 69 10 chr17 81040362 81040463 -14232188 + B3A SINE B2 57 163 -35 6 1203 609 106 11 0 chr17 81040488 81040582 -14232069 - BC1_Mm scRNA scRNA -57 95 1 6 1203 310 221 136 24 chr17 81041414 81041539 -14231112 + B1F SINE Alu 1 139 -10 6 1203 410 316 72 5 chr17 81041747 81041941 -14230710 + Tigger6a DNA MER2_type 7 213 -870 6 1203 273 216 91 107 chr17 81042064 81042148 -14230503 + Tigger6a DNA MER2_type 857 924 -159 6 1203 477 0 0 0 chr17 81042148 81042201 -14230450 + (TA)n Simple_repeat Simple_repeat 1 53 0 6 1203 273 216 91 107 chr17 81042201 81042303 -14230348 + Tigger6a DNA MER2_type 925 1040 -43 6 1203 283 226 54 87 chr17 81042294 81042386 -14230265 - PB1D10 SINE Alu -27 90 2 6 1203 375 60 0 0 chr17 81043385 81043435 -14229216 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 1203 450 0 0 0 chr17 81045289 81045339 -14227312 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 1203 314 292 78 26 chr17 81046582 81046698 -14225953 - PB1 SINE Alu -5 122 1 7 1203 305 215 40 79 chr17 81046829 81046930 -14225721 - B1_Mur1 SINE Alu 0 149 53 7 1203 703 186 22 15 chr17 81046978 81047114 -14225537 + B1_Mur2 SINE Alu 12 148 -1 7 1203 25 65 0 0 chr17 81048819 81048865 -14223786 + AT_rich Low_complexity Low_complexity 1 46 0 7 1203 258 150 49 16 chr17 81049708 81049769 -14222882 - ID4 SINE ID -12 71 9 7 1203 358 364 51 60 chr17 81051496 81051986 -14220665 - L2c LINE L2 -246 3141 2659 7 1203 489 293 15 22 chr17 81052853 81052989 -14219662 + ID_B1 SINE B4 82 216 -8 7 1203 239 191 0 0 chr17 81053976 81054018 -14218633 + L2a LINE L2 3345 3386 -40 7 1203 308 266 55 9 chr17 81054151 81054261 -14218390 - Tigger5 DNA MER2_type -7 2399 2285 7 1203 438 364 48 36 chr17 81054234 81054485 -14218166 - Tigger5 DNA MER2_type -2136 270 17 7 1203 925 164 7 0 chr17 81055600 81055746 -14216905 - B1_Mus1 SINE Alu -1 147 1 7 1203 418 343 21 7 chr17 81056144 81056288 -14216363 + MER58B DNA MER1_type 176 321 -20 8 1203 942 138 19 0 chr17 81056464 81056623 -14216028 - MTC LTR MaLR -12 409 248 8 1203 847 147 0 7 chr17 81056629 81056773 -14215878 - MTC LTR MaLR -278 143 1 8 1203 46 74 0 0 chr17 81056787 81056882 -14215769 + AT_rich Low_complexity Low_complexity 1 95 0 8 1203 199 389 33 0 chr17 81056968 81057058 -14215593 - L2c LINE L2 -217 3170 3078 8 1203 691 301 67 41 chr17 81057424 81057739 -14214912 + RLTR26 LTR ERVK 97 419 -223 8 1203 735 249 67 31 chr17 81058231 81058426 -14214225 + B3 SINE B2 14 215 -1 8 1203 578 298 113 9 chr17 81058575 81058805 -14213846 - B4 SINE B4 -15 277 24 8 1203 255 244 60 12 chr17 81058817 81058900 -14213751 - L1_Rod LINE L1 -634 5213 5127 8 1203 214 393 0 8 chr17 81059061 81059179 -14213472 - L3 LINE CR1 -1274 3215 3099 8 1203 21 0 0 0 chr17 81059651 81059672 -14212979 + AT_rich Low_complexity Low_complexity 1 21 0 8 1203 33 0 0 0 chr17 81059964 81059997 -14212654 + AT_rich Low_complexity Low_complexity 1 33 0 9 1203 187 258 32 0 chr17 81061441 81061503 -14211148 + MIR3 SINE MIR 126 189 -19 9 1203 209 368 9 9 chr17 81062019 81062126 -14210525 - MIRb SINE MIR -104 164 58 9 1203 1225 112 20 74 chr17 81065781 81065983 -14206668 + B2_Mm2 SINE B2 1 191 -4 9 1203 227 167 24 0 chr17 81066271 81066313 -14206338 + MLT1D LTR MaLR 304 346 -159 9 1203 952 259 82 43 chr17 81066324 81066836 -14205815 + L1MB1 LINE L1 4784 5315 -825 9 1203 226 306 69 0 chr17 81066950 81067022 -14205629 + L1MB1 LINE L1 5487 5563 -620 9 1203 297 204 29 106 chr17 81067022 81067126 -14205525 - RLTR14 LTR ERV1 0 382 287 9 1203 337 224 147 43 chr17 81067263 81067333 -14205318 - RMER21B LTR ERV1 -351 491 413 9 1203 210 37 0 0 chr17 81067333 81067360 -14205291 + (TGGGGG)n Simple_repeat Simple_repeat 2 28 0 9 1203 337 224 147 43 chr17 81067360 81067452 -14205199 - RMER21B LTR ERV1 -430 412 313 9 1203 414 247 97 108 chr17 81067477 81067527 -14205124 - RMER21B LTR ERV1 -649 193 139 9 1203 351 0 0 0 chr17 81067527 81067566 -14205085 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 1203 414 247 97 108 chr17 81067566 81067710 -14204941 - RMER21B LTR ERV1 -704 138 2 9 1203 283 263 39 29 chr17 81068128 81068230 -14204421 + RLTR14 LTR ERV1 280 382 0 1 1203 226 343 88 6 chr17 81068230 81068400 -14204251 + L1MB1 LINE L1 5566 5749 -431 9 1203 463 31 15 15 chr17 81068430 81068496 -14204155 + (CA)n Simple_repeat Simple_repeat 2 67 0 1 1203 1490 185 86 207 chr17 81068582 81069187 -14203464 + RMER5 LTR ERV1 1 532 -2 1 1203 619 306 82 3 chr17 81069193 81069475 -14203176 + L1MB1 LINE L1 5843 6146 -22 9 1203 1458 68 16 16 chr17 81069587 81069781 -14202870 + B2_Mm2 SINE B2 2 195 0 1 1203 22 0 0 0 chr17 81070286 81070308 -14202343 + AT_rich Low_complexity Low_complexity 1 22 0 1 1203 458 274 76 71 chr17 81070693 81070917 -14201734 - LTR65 LTR ERV1 0 669 445 1 1203 330 279 78 42 chr17 81071035 81071177 -14201474 - B3 SINE B2 -33 183 37 1 1203 297 188 14 0 chr17 81071311 81071380 -14201271 + MIR SINE MIR 183 252 -10 1 1203 32 0 0 0 chr17 81071563 81071595 -14201056 + AT_rich Low_complexity Low_complexity 1 32 0 1 1203 1163 91 35 51 chr17 81071602 81071799 -14200852 - B2_Mm2 SINE B2 0 195 2 1 1203 1182 109 5 77 chr17 81071822 81072030 -14200621 - B2_Mm2 SINE B2 -2 193 1 1 1203 433 0 35 0 chr17 81072551 81072608 -14200043 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 1 1203 1196 29 0 0 chr17 81072608 81072745 -14199906 - B1_Mus2 SINE Alu -10 137 1 1 1203 302 336 74 35 chr17 81074271 81074502 -14198149 + L2 LINE L2 2170 2409 -1010 1 1203 927 81 7 14 chr17 81075215 81075353 -14197298 + B2_Mm2 SINE B2 15 151 -44 1 1203 198 0 0 0 chr17 81075355 81075377 -14197274 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 1203 582 186 8 33 chr17 81075515 81075637 -14197014 + PB1D9 SINE Alu 1 119 -1 1 1203 1394 192 17 62 chr17 81076281 81076637 -14196014 + RLTR15 LTR ERVK 1 340 -19 1 1203 292 232 81 29 chr17 81077272 81077445 -14195206 + L1MC5 LINE L1 7375 7556 -405 1 1203 327 281 152 32 chr17 81077555 81077713 -14194938 - B4A SINE B4 -10 282 106 1 1203 789 174 14 14 chr17 81077861 81078007 -14194644 + B1_Mur2 SINE Alu 4 149 0 1 1203 290 202 14 36 chr17 81078037 81078114 -14194537 - L1M3 LINE L1 -595 5589 5515 1 1203 394 0 76 0 chr17 81078189 81078255 -14194396 + (TG)n Simple_repeat Simple_repeat 1 71 0 1 1203 196 302 48 77 chr17 81078361 81078465 -14194186 - MIRb SINE MIR -36 232 132 1 1203 232 311 40 0 chr17 81080042 81080116 -14192535 + B1F SINE Alu 18 94 -55 1 1203 23 68 0 0 chr17 81080339 81080383 -14192268 + AT_rich Low_complexity Low_complexity 1 44 0 1 1203 359 301 155 40 chr17 81080462 81080667 -14191984 - MIR SINE MIR -36 226 5 1 1203 23 0 0 0 chr17 81080816 81080839 -14191812 + AT_rich Low_complexity Low_complexity 1 23 0 1 1203 795 255 18 36 chr17 81080847 81081067 -14191584 + ID_B1 SINE B4 1 216 -8 1 1203 304 276 72 54 chr17 81081103 81081214 -14191437 + B1F SINE Alu 1 113 -7 1 1203 290 311 142 35 chr17 81081536 81081796 -14190855 + B4A SINE B4 1 288 -4 1 1203 316 280 15 99 chr17 81081979 81082110 -14190541 + B4A SINE B4 2 121 -171 1 1203 620 177 14 97 chr17 81082244 81082388 -14190263 + B1_Mur1 SINE Alu 8 139 -10 1 1203 915 190 177 37 chr17 81082417 81082745 -14189906 + ORR1D1 LTR MaLR 1 374 0 1 1203 647 173 264 6 chr17 81082809 81082972 -14189679 + B3 SINE B2 2 206 -10 1 1203 734 251 79 87 chr17 81084559 81084938 -14187713 + MTEa LTR MaLR 4 379 0 1 1203 259 160 0 0 chr17 81085118 81085161 -14187490 - L1M4 LINE L1 -642 5600 5558 1 1203 375 226 3 40 chr17 81085576 81085692 -14186959 - L1M4 LINE L1 -1111 5029 4918 1 1203 516 16 0 0 chr17 81086939 81087000 -14185651 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 1203 22 0 0 0 chr17 81087280 81087302 -14185349 + AT_rich Low_complexity Low_complexity 1 22 0 1 1203 519 228 0 26 chr17 81087399 81087516 -14185135 + MER58A DNA MER1_type 48 161 -63 1 1203 618 289 116 50 chr17 81088061 81088507 -14184144 - L1M5 LINE L1 -590 5754 5256 1 1203 398 299 89 17 chr17 81088537 81088717 -14183934 + MLT1B LTR MaLR 45 237 -153 1 1203 255 252 60 80 chr17 81088837 81088988 -14183663 - L1M3 LINE L1 -1021 5119 4972 1 1203 1309 104 0 40 chr17 81089405 81089605 -14183046 - B2_Mm2 SINE B2 -3 192 1 1 1203 264 30 0 0 chr17 81089645 81089678 -14182973 + (T)n Simple_repeat Simple_repeat 1 33 0 1 1203 791 173 18 20 chr17 81090290 81090463 -14182188 - B3 SINE B2 -10 185 1 1 1203 218 351 0 13 chr17 81090638 81090713 -14181938 + ID4 SINE ID 3 76 -7 1 1203 225 0 0 0 chr17 81090716 81090741 -14181910 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 1203 395 306 37 37 chr17 81090818 81090981 -14181670 + RSINE1 SINE B4 2 164 -1 1 1203 378 127 0 0 chr17 81090982 81091053 -14181598 + (CA)n Simple_repeat Simple_repeat 1 71 0 1 1203 296 301 110 29 chr17 81091084 81091429 -14181222 + L1MEe LINE L1 206 578 -4276 1 1203 879 175 76 20 chr17 81091950 81092148 -14180503 + B3 SINE B2 3 211 -5 1 1203 319 236 128 0 chr17 81092514 81092702 -14179949 + MER44D DNA MER2_type 28 245 -94 1 1203 21 0 0 0 chr17 81092974 81092995 -14179656 + AT_rich Low_complexity Low_complexity 1 21 0 1 1203 470 284 22 49 chr17 81093477 81093662 -14178989 + B4A SINE B4 2 181 -111 1 1203 622 243 31 31 chr17 81093896 81094087 -14178564 - B3A SINE B2 -7 191 1 1 1203 22 35 0 0 chr17 81094091 81094120 -14178531 + AT_rich Low_complexity Low_complexity 1 29 0 1 1203 302 277 67 13 chr17 81094965 81095108 -14177543 + B1F SINE Alu 5 149 0 1 1203 1429 56 22 0 chr17 81095111 81095291 -14177360 + B2_Mm2 SINE B2 3 186 -9 1 1203 231 324 44 0 chr17 81095299 81095367 -14177284 + ID4_ SINE ID 3 73 -10 1 1203 216 108 0 75 chr17 81095340 81095380 -14177271 + B2_Mm2 SINE B2 48 84 -111 1 1203 231 300 0 0 chr17 81095939 81096009 -14176642 + MTEb LTR MaLR 287 356 -23 1 1203 292 275 12 12 chr17 81096880 81096961 -14175690 + MER2 DNA MER2_type 243 323 -22 1 1203 473 182 198 0 chr17 81097654 81097780 -14174871 - B3A SINE B2 -47 151 1 1 1203 245 250 42 0 chr17 81098472 81098544 -14174107 - RMER30 DNA MER1_type -126 76 2 1 1203 253 256 62 67 chr17 81098687 81098880 -14173771 - L1M5 LINE L1 -2771 3375 3184 1 1203 243 291 23 0 chr17 81098892 81098978 -14173673 + L1_Mur3 LINE L1 4787 4874 -1006 1 1203 590 264 85 119 chr17 81099153 81099570 -14173081 + L1_Mur3 LINE L1 5129 5607 -549 1 1203 903 209 14 33 chr17 81099570 81099783 -14172868 + B3 SINE B2 2 210 -6 1 1203 432 264 85 119 chr17 81099783 81099834 -14172817 + L1_Mur3 LINE L1 5538 5581 -266 1 1203 252 298 83 8 chr17 81100105 81100237 -14172414 + L1MA10 LINE L1 6164 6305 -29 1 1203 242 254 15 45 chr17 81100240 81100306 -14172345 - B1F SINE Alu -85 64 1 1 1203 354 275 54 15 chr17 81100594 81100724 -14171927 - B3A SINE B2 -8 190 53 1 1203 552 15 0 0 chr17 81100919 81100984 -14171667 + (GAGAA)n Simple_repeat Simple_repeat 5 69 0 1 1203 1213 55 0 0 chr17 81102502 81102648 -14170003 - B1_Mus1 SINE Alu -1 147 2 1 1203 606 248 34 14 chr17 81102679 81102826 -14169825 - RSINE1 SINE B4 -8 157 8 1 1203 460 240 129 24 chr17 81103552 81103676 -14168975 + RSINE1 SINE B4 5 141 -24 1 1203 375 23 0 0 chr17 81103925 81103969 -14168682 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1203 350 312 14 28 chr17 81104145 81104287 -14168364 + RSINE1 SINE B4 4 143 -22 1 1203 314 287 19 96 chr17 81105228 81105436 -14167215 - B3A SINE B2 -6 192 1 1 1203 265 288 0 15 chr17 81106193 81106260 -14166391 + CT-rich Low_complexity Low_complexity 3 68 0 1 1203 267 307 86 13 chr17 81107131 81107283 -14165368 + MIR SINE MIR 44 206 -56 1 1203 541 209 197 55 chr17 81107301 81107473 -14165178 + L1MC3 LINE L1 6402 6612 -1173 1 1203 638 217 0 0 chr17 81107473 81107593 -14165058 + PB1D9 SINE Alu 1 120 0 1 1203 541 209 197 55 chr17 81107593 81107631 -14165020 + L1MC3 LINE L1 6613 6659 -1126 1 1203 333 0 0 0 chr17 81107631 81107668 -14164983 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1203 541 209 197 55 chr17 81107668 81107745 -14164906 + L1MC3 LINE L1 6660 6731 -1054 1 1203 341 263 68 79 chr17 81107811 81108001 -14164650 + L1MC3 LINE L1 6711 6898 -887 1 1203 268 292 8 48 chr17 81108438 81108564 -14164087 + L1MC3 LINE L1 7448 7568 -217 1 1203 269 277 130 8 chr17 81111610 81111741 -14160910 + MLT1B LTR MaLR 205 351 -39 1 1203 587 240 116 13 chr17 81111807 81112031 -14160620 + L1MC2 LINE L1 4821 5067 -1079 1 1203 261 229 106 41 chr17 81112043 81112166 -14160485 + L1MD LINE L1 5186 5316 -830 1 1203 348 261 0 54 chr17 81112171 81112264 -14160387 - PB1D10 SINE Alu -2 115 28 1 1203 1793 243 107 72 chr17 81112323 81113183 -14159468 + L1MC2 LINE L1 5328 6217 -127 1 1203 368 288 72 0 chr17 81113531 81113656 -14158995 + B1F1 SINE Alu 1 134 -15 1 1203 849 231 18 36 chr17 81114159 81114379 -14158272 + B3 SINE B2 1 216 0 1 1203 487 282 42 7 chr17 81115120 81115263 -14157388 - RSINE1 SINE B4 -17 148 1 1 1203 920 219 46 12 chr17 81115437 81115677 -14156974 - B4A SINE B4 -43 249 2 1 1203 520 248 47 1 chr17 81116347 81116508 -14156143 + L1M5 LINE L1 4457 4623 -1523 1 1203 319 270 74 25 chr17 81116700 81116863 -14155788 + L1M5 LINE L1 4600 4770 -1376 1 1203 385 238 89 43 chr17 81117201 81117389 -14155262 - B3A SINE B2 -9 186 2 1 1203 32 75 0 0 chr17 81117471 81117538 -14155113 + AT_rich Low_complexity Low_complexity 1 67 0 1 1203 290 269 0 25 chr17 81117829 81117909 -14154742 + MTEb LTR MaLR 287 364 -15 1 1203 353 306 30 10 chr17 81117943 81118042 -14154609 + Charlie1 DNA MER1_type 9 109 -2672 1 1203 867 270 123 31 chr17 81118053 81118500 -14154151 + Charlie1 DNA MER1_type 1498 1985 -796 1 1203 672 263 162 13 chr17 81118549 81119000 -14153651 + Charlie1 DNA MER1_type 2102 2619 -162 1 1203 287 258 143 8 chr17 81120379 81120512 -14152139 - L2a LINE L2 -5 3421 3271 1 1203 392 301 130 32 chr17 81120567 81120852 -14151799 + Arthur1C DNA Tip100 42 354 -9 1 1203 516 196 8 51 chr17 81121534 81121652 -14150999 - URR1B DNA MER1_type -112 113 1 1 1203 332 287 48 16 chr17 81122340 81122464 -14150187 - RSINE1 SINE B4 -28 137 10 1 1203 360 302 40 81 chr17 81122947 81123120 -14149531 + RMER30 DNA MER1_type 14 179 -23 2 1203 428 210 4 61 chr17 81124511 81124640 -14148011 - B1F1 SINE Alu -3 124 6 2 1203 251 250 13 40 chr17 81124732 81124807 -14147844 + ID_B1 SINE B4 151 223 -1 2 1203 348 83 0 0 chr17 81125052 81125100 -14147551 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1203 238 294 69 23 chr17 81125117 81125204 -14147447 - RSINE1 SINE B4 -32 133 43 2 1203 333 327 35 17 chr17 81125230 81125345 -14147306 + PB1D10 SINE Alu 1 117 0 2 1203 710 233 13 0 chr17 81125366 81125516 -14147135 + B3A SINE B2 1 152 -46 2 1203 378 0 0 0 chr17 81125525 81125567 -14147084 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1203 358 296 36 15 chr17 81126291 81126428 -14146223 + LFSINE_Vert SINE SINE 168 307 -152 2 1203 28 105 0 0 chr17 81127229 81127334 -14145317 + GC_rich Low_complexity Low_complexity 1 105 0 2 1203 28 29 0 0 chr17 81127380 81127415 -14145236 + GC_rich Low_complexity Low_complexity 1 35 0 2 1203 229 213 8 76 chr17 81127487 81127619 -14145032 + (CCCG)n Simple_repeat Simple_repeat 1 123 0 2 1203 207 0 0 0 chr17 81128810 81128833 -14143818 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1203 217 271 239 8 chr17 81129440 81129574 -14143077 - MIR SINE MIR -16 246 82 2 1203 558 291 174 41 chr17 81129829 81129872 -14142779 + L1MA4 LINE L1 5302 5331 -847 2 1203 1408 79 11 0 chr17 81129872 81130061 -14142590 + B2_Mm1t SINE B2 2 192 -1 2 1203 834 242 175 35 chr17 81130061 81130554 -14142097 + L1MA4 LINE L1 5332 5918 -382 2 1203 378 309 41 0 chr17 81131165 81131288 -14141363 + B3A SINE B2 1 128 -70 2 1203 678 262 0 18 chr17 81131408 81131575 -14141076 - B3A SINE B2 -31 167 4 2 1203 829 266 34 0 chr17 81131654 81131861 -14140790 - ID_B1 SINE B4 -7 217 4 2 1203 771 11 0 0 chr17 81131955 81132043 -14140608 + (TAGA)n Simple_repeat Simple_repeat 2 89 0 2 1203 1625 268 78 125 chr17 81132360 81133275 -14139376 + Lx8 LINE L1 6367 7238 -235 2 1203 384 77 0 0 chr17 81133275 81133327 -14139324 + (T)n Simple_repeat Simple_repeat 1 52 0 2 1203 950 31 0 23 chr17 81133327 81133457 -14139194 - B1_Mus2 SINE Alu 0 147 21 2 150 528 222 248 20 chr17 81133460 81133662 -14138989 + Lx8 LINE L1 7224 7471 -2 2 1204 34 24 0 0 chr17 81133687 81133728 -14138923 + AT_rich Low_complexity Low_complexity 1 41 0 2 1204 231 286 0 0 chr17 81133737 81133793 -14138858 - B2_Mm2 SINE B2 -128 67 12 2 1204 366 23 0 0 chr17 81133959 81134002 -14138649 + (TGGA)n Simple_repeat Simple_repeat 3 45 0 2 1204 511 229 32 65 chr17 81134602 81134756 -14137895 + B1F1 SINE Alu 1 149 0 2 1204 204 364 0 26 chr17 81135294 81135407 -14137244 - L2c LINE L2 -189 3198 3089 2 1204 309 285 41 3 chr17 81135725 81135827 -14136824 - B1F2 SINE Alu -7 110 10 2 1204 374 293 77 8 chr17 81136463 81136580 -14136071 + ID_B1 SINE B4 24 148 -76 2 1204 183 42 0 0 chr17 81136581 81136605 -14136046 + (TAAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1204 392 273 96 45 chr17 81136982 81137139 -14135512 + LTR16B1 LTR ERVL 1 165 -315 2 1204 473 285 23 0 chr17 81137250 81137380 -14135271 + ID_B1 SINE B4 84 216 -8 2 1204 297 0 0 0 chr17 81137380 81137413 -14135238 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 1204 1657 21 5 10 chr17 81137587 81137780 -14134871 - B2_Mm1t SINE B2 -1 192 1 2 1204 342 164 33 0 chr17 81138181 81138242 -14134409 + ID4_ SINE ID 2 64 -19 2 1204 212 217 0 42 chr17 81138659 81138707 -14133944 + (CATG)n Simple_repeat Simple_repeat 2 47 0 2 1204 442 280 90 70 chr17 81139230 81139430 -14133221 + B3 SINE B2 2 205 -11 2 1204 795 213 0 0 chr17 81139461 81139602 -14133049 + B1_Mur1 SINE Alu 1 141 -8 2 1204 1719 165 70 68 chr17 81140478 81140861 -14131790 - ORR1C2 LTR MaLR 0 384 1 2 1204 342 152 0 0 chr17 81140930 81140989 -14131662 + CT-rich Low_complexity Low_complexity 2 60 0 2 1204 680 207 0 73 chr17 81140989 81141140 -14131511 - B1_Mus2 SINE Alu -6 141 2 2 1204 478 230 49 49 chr17 81141182 81141324 -14131327 - ORR1D2 LTR MaLR 0 370 229 2 1204 2474 271 30 58 chr17 81141325 81142201 -14130450 - ORR1D2-int LTR MaLR -519 851 1 2 1204 1290 254 44 30 chr17 81142201 81142566 -14130085 - ORR1D2 LTR MaLR 0 370 1 2 1204 234 268 175 24 chr17 81142721 81142847 -14129804 - MIRc SINE MIR -20 248 104 2 1204 251 284 80 35 chr17 81143150 81143263 -14129388 + L1ME3A LINE L1 5521 5638 -602 2 1204 339 287 40 0 chr17 81144470 81144571 -14128080 - B1F SINE Alu -8 141 37 2 1204 185 226 0 19 chr17 81144614 81144668 -14127983 + CT-rich Low_complexity Low_complexity 3 55 0 2 1204 876 256 47 149 chr17 81145273 81145682 -14126969 + ORR1D1 LTR MaLR 8 374 0 2 1204 290 323 104 0 chr17 81145682 81145774 -14126877 + RSINE1 SINE B4 29 130 -35 2 1204 23 0 0 0 chr17 81145814 81145837 -14126814 + AT_rich Low_complexity Low_complexity 1 23 0 2 1204 723 170 22 7 chr17 81145999 81146135 -14126516 + B3A SINE B2 1 138 -60 2 1204 240 100 0 0 chr17 81146145 81146185 -14126466 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1204 1186 61 0 0 chr17 81146211 81146358 -14126293 - B1_Mm SINE Alu 0 147 1 2 1204 216 0 0 0 chr17 81146362 81146386 -14126265 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1204 276 341 78 0 chr17 81146667 81146846 -14125805 + L1ME3A LINE L1 5713 5905 -335 2 1204 234 0 0 0 chr17 81146853 81146879 -14125772 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 2 1204 368 232 60 38 chr17 81146881 81147002 -14125649 - RSINE1 SINE B4 -39 126 4 2 1204 355 252 178 13 chr17 81147002 81147227 -14125424 + L1ME3A LINE L1 5912 6173 0 2 1204 284 0 0 27 chr17 81148525 81148562 -14124089 + (TTA)n Simple_repeat Simple_repeat 1 36 0 2 1204 876 216 14 40 chr17 81148584 81148806 -14123845 + B3 SINE B2 1 216 0 2 1204 907 143 7 7 chr17 81148846 81148987 -14123664 + B1_Mur4 SINE Alu 4 144 -6 2 1204 324 0 0 0 chr17 81148999 81149035 -14123616 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1204 514 235 76 0 chr17 81149040 81149172 -14123479 - B3A SINE B2 -56 142 1 2 1204 1920 123 73 6 chr17 81149839 81150118 -14122533 - ORR1B1 LTR MaLR -5 389 100 2 1204 1364 85 11 0 chr17 81150118 81150306 -14122345 - B2_Mm1t SINE B2 -3 190 1 2 1204 1920 123 73 6 chr17 81150306 81150353 -14122298 - ORR1B1 LTR MaLR -295 99 43 2 1204 1815 46 0 0 chr17 81150736 81150955 -14121696 + L1_Mus1 LINE L1 6349 6567 0 2 1204 1642 166 63 28 chr17 81151227 81151623 -14121028 - RMER17C LTR ERVK 0 410 1 2 1204 1207 184 9 9 chr17 81152448 81152662 -14119989 + B3 SINE B2 3 216 0 2 1204 699 222 0 59 chr17 81152675 81152815 -14119836 + B1_Mur1 SINE Alu 6 137 -12 2 1204 585 0 0 0 chr17 81152815 81152880 -14119771 + (GGA)n Simple_repeat Simple_repeat 3 67 0 2 1204 699 222 0 59 chr17 81152880 81152892 -14119759 + B1_Mur1 SINE Alu 138 149 0 2 1204 1442 191 36 128 chr17 81152906 81153344 -14119307 + RMER10B LTR ERVL 1 398 0 2 1204 230 316 0 0 chr17 81153354 81153411 -14119240 + PB1D10 SINE Alu 16 72 -45 2 1204 678 309 77 11 chr17 81153580 81153852 -14118799 + B4A SINE B4 2 291 -1 2 1204 205 343 0 0 chr17 81154359 81154429 -14118222 + L2a LINE L2 3354 3423 -3 2 1204 3636 2 0 10 chr17 81155744 81156149 -14116502 + L1Md_T LINE L1 6182 6582 0 2 1204 459 264 58 0 chr17 81156413 81156534 -14116117 - ID_B1 SINE B4 -19 205 78 2 1204 450 0 0 0 chr17 81156559 81156609 -14116042 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1204 323 343 108 34 chr17 81156735 81156876 -14115775 - L1M5 LINE L1 -2062 5820 5662 2 1204 633 27 0 0 chr17 81156876 81156951 -14115700 + (TC)n Simple_repeat Simple_repeat 2 76 0 2 1204 533 308 84 47 chr17 81156951 81157336 -14115315 - L1M5 LINE L1 -2221 5661 5259 2 1204 349 279 113 20 chr17 81157552 81157702 -14114949 + L2 LINE L2 2686 2849 -570 2 1204 433 235 0 0 chr17 81157707 81157788 -14114863 + ID4_ SINE ID 1 81 -2 2 1204 563 221 0 0 chr17 81158445 81158549 -14114102 - PB1D9 SINE Alu -8 112 9 2 1204 228 330 60 14 chr17 81158629 81158847 -14113804 - L1M5 LINE L1 -2377 3769 3542 2 1204 483 193 11 0 chr17 81159215 81159303 -14113348 - PB1D10 SINE Alu -16 101 13 2 1204 730 225 88 16 chr17 81159383 81159577 -14113074 - B3 SINE B2 -8 208 1 2 1204 466 218 0 61 chr17 81159694 81159826 -14112825 - B1_Mur2 SINE Alu -3 146 23 2 1204 267 31 0 0 chr17 81160514 81160546 -14112105 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1204 600 107 0 0 chr17 81160546 81160649 -14112002 + (GA)n Simple_repeat Simple_repeat 1 103 0 2 1204 312 200 57 0 chr17 81160692 81160762 -14111889 - B3A SINE B2 -117 81 8 2 1204 1130 61 0 26 chr17 81160806 81160958 -14111693 - B1_Mus1 SINE Alu 0 148 1 2 1204 180 0 0 0 chr17 81161251 81161271 -14111380 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2 1204 252 0 0 0 chr17 81161271 81161299 -14111352 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2 1204 829 128 22 15 chr17 81161301 81161436 -14111215 - B1_Mus1 SINE Alu -12 136 1 2 1204 1173 68 0 0 chr17 81161453 81161600 -14111051 + B1_Mus2 SINE Alu 1 147 0 2 1204 281 200 0 0 chr17 81161776 81161836 -14110815 + ID_B1 SINE B4 155 214 -10 2 1204 441 0 0 0 chr17 81162754 81162803 -14109848 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1204 667 234 43 62 chr17 81163302 81163319 -14109332 - B3 SINE B2 -10 206 190 2 1204 207 0 0 0 chr17 81163319 81163342 -14109309 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 1204 668 227 17 32 chr17 81163342 81163534 -14109117 - B3A SINE B2 -27 189 1 2 1204 375 23 0 0 chr17 81163608 81163652 -14108999 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 1204 180 77 0 0 chr17 81163853 81163879 -14108772 + (CTA)n Simple_repeat Simple_repeat 1 26 0 2 1204 929 159 0 14 chr17 81163891 81164038 -14108613 - B1_Mus2 SINE Alu -2 145 1 2 1204 421 296 47 17 chr17 81164084 81164256 -14108395 - B3A SINE B2 -19 179 3 2 1204 545 220 53 0 chr17 81164303 81164453 -14108198 - L1MA7 LINE L1 0 6291 6134 2 1204 638 123 8 16 chr17 81164956 81165080 -14107571 + Lx4A LINE L1 6934 7056 -2 3 1204 628 228 57 40 chr17 81165302 81165478 -14107173 - B3A SINE B2 -2 214 36 3 1204 340 146 12 24 chr17 81165554 81165638 -14107013 + Lx4A LINE L1 6928 7010 -48 3 1204 245 279 0 48 chr17 81165943 81166026 -14106625 + ID4 SINE ID 5 83 0 3 1204 228 100 0 0 chr17 81166033 81166073 -14106578 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 3 1204 583 222 0 0 chr17 81166105 81166213 -14106438 + ID_B1 SINE B4 108 215 -9 3 1204 295 109 53 35 chr17 81166166 81166223 -14106428 + PB1D10 SINE Alu 59 116 -1 3 1204 841 157 21 12 chr17 81166726 81166967 -14105684 + CT-rich Low_complexity Low_complexity 1 243 0 3 1204 932 100 0 48 chr17 81166967 81167156 -14105495 + (TCC)n Simple_repeat Simple_repeat 1 180 0 3 1204 198 0 0 0 chr17 81167156 81167178 -14105473 + (TTCC)n Simple_repeat Simple_repeat 3 24 0 3 1204 1160 191 218 9 chr17 81167579 81167733 -14104918 + ORR1C2 LTR MaLR 2 170 -214 3 1204 468 0 0 0 chr17 81167733 81167785 -14104866 + (TC)n Simple_repeat Simple_repeat 2 53 0 3 1204 1160 191 218 9 chr17 81167785 81167947 -14104704 + ORR1C2 LTR MaLR 171 384 0 3 1204 458 249 182 111 chr17 81168490 81168743 -14103908 + B4 SINE B4 1 271 -21 3 1204 292 333 16 16 chr17 81169022 81169147 -14103504 - MLT1A0 LTR MaLR -5 360 236 3 1204 726 156 244 0 chr17 81169508 81169668 -14102983 - B3 SINE B2 -13 203 5 3 1204 507 139 178 0 chr17 81170598 81170699 -14101952 - B1_Mur4 SINE Alu 0 150 32 3 1204 502 228 93 16 chr17 81170810 81170939 -14101712 - B1F SINE Alu -9 140 2 3 1204 881 194 106 16 chr17 81171087 81171276 -14101375 + B3 SINE B2 1 206 -10 3 1204 408 274 89 67 chr17 81172748 81173075 -14099576 + MLT1A0 LTR MaLR 1 406 -2 3 1204 651 207 0 0 chr17 81173134 81173279 -14099372 + (TCTA)n Simple_repeat Simple_repeat 2 146 0 3 1204 357 213 0 39 chr17 81173454 81173532 -14099119 + B4 SINE B4 13 87 -205 3 1204 658 254 38 71 chr17 81173561 81173773 -14098878 + B4 SINE B4 72 276 -16 3 1204 423 0 0 0 chr17 81173784 81173831 -14098820 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1204 239 296 0 0 chr17 81173920 81173974 -14098677 + polypyrimidine Low_complexity Low_complexity 4 57 0 3 1204 323 60 0 20 chr17 81173978 81174029 -14098622 + (TTG)n Simple_repeat Simple_repeat 2 51 0 3 1204 251 280 0 11 chr17 81174029 81174123 -14098528 + CT-rich Low_complexity Low_complexity 2 94 0 3 1204 737 83 18 0 chr17 81174113 81174222 -14098429 + (TTTC)n Simple_repeat Simple_repeat 2 112 0 3 1204 790 268 93 0 chr17 81174249 81174529 -14098122 - L1MA9 LINE L1 -147 6165 5860 3 1204 971 272 61 3 chr17 81174540 81174853 -14097798 - L1MA9 LINE L1 -378 5811 5481 3 1204 193 271 13 79 chr17 81174945 81175021 -14097630 - MIR SINE MIR -153 109 39 3 1204 766 152 50 14 chr17 81175429 81175569 -14097082 + B1_Mus2 SINE Alu 2 146 -1 3 1204 822 94 0 0 chr17 81175583 81175700 -14096951 + (GA)n Simple_repeat Simple_repeat 2 118 0 3 1204 183 159 0 0 chr17 81175962 81175987 -14096664 + polypurine Low_complexity Low_complexity 1 25 0 3 1204 351 0 0 0 chr17 81175987 81176026 -14096625 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1204 183 159 0 0 chr17 81176026 81176044 -14096607 + polypurine Low_complexity Low_complexity 26 43 0 3 1204 705 137 94 0 chr17 81176582 81176699 -14095952 - Lx8 LINE L1 -297 7176 7049 3 1204 467 194 21 8 chr17 81177455 81177572 -14095079 + PB1D10 SINE Alu 1 112 -5 3 1204 326 95 0 31 chr17 81178481 81178546 -14094105 + (TCTCTG)n Simple_repeat Simple_repeat 4 66 0 3 1204 590 257 187 0 chr17 81178923 81179110 -14093541 - ID_B1 SINE B4 -2 222 1 3 1204 420 20 0 0 chr17 81179519 81179568 -14093083 + (GA)n Simple_repeat Simple_repeat 1 49 0 3 1204 522 245 35 21 chr17 81180105 81180247 -14092404 + Lx7 LINE L1 7218 7361 -335 3 1204 206 143 0 20 chr17 81180291 81180341 -14092310 + T-rich Low_complexity Low_complexity 5 53 0 3 1204 1205 49 7 0 chr17 81180341 81180485 -14092166 - B1_Mus2 SINE Alu 0 147 3 3 1204 324 200 0 0 chr17 81180511 81180581 -14092070 + CT-rich Low_complexity Low_complexity 1 70 0 3 1204 567 192 0 0 chr17 81180590 81180694 -14091957 + B1_Mur2 SINE Alu 1 104 -45 3 1204 479 191 14 21 chr17 81180722 81180866 -14091785 + GA-rich Low_complexity Low_complexity 3 145 0 3 1204 360 0 0 0 chr17 81181006 81181046 -14091605 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1204 429 36 0 0 chr17 81181595 81181650 -14091001 + (TG)n Simple_repeat Simple_repeat 1 55 0 3 1204 228 35 0 0 chr17 81181656 81181685 -14090966 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 3 1204 282 192 162 14 chr17 81181692 81181766 -14090885 - RSINE1 SINE B4 -60 105 21 3 1204 263 269 21 21 chr17 81181782 81181877 -14090774 - MLT1D LTR MaLR -309 196 102 3 1204 1929 142 105 23 chr17 81181879 81182232 -14090419 + RLTR14 LTR ERV1 1 382 0 3 1204 561 30 0 0 chr17 81183026 81183093 -14089558 + (TCCC)n Simple_repeat Simple_repeat 4 70 0 3 1204 286 242 10 81 chr17 81183162 81183261 -14089390 - B3A SINE B2 -105 93 2 3 1204 294 264 98 33 chr17 81183754 81183907 -14088744 + MIRb SINE MIR 105 267 -1 3 1204 491 296 64 13 chr17 81184009 81184242 -14088409 + MLT1A0 LTR MaLR 121 365 0 3 1204 318 324 0 0 chr17 81184766 81184871 -14087780 - MIR SINE MIR -48 214 110 3 1204 287 167 106 0 chr17 81185028 81185094 -14087557 - ID4 SINE ID -10 73 1 3 1204 186 43 0 0 chr17 81185101 81185124 -14087527 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1204 231 196 0 51 chr17 81185333 81185392 -14087259 + GA-rich Low_complexity Low_complexity 4 59 0 3 1204 275 291 12 37 chr17 81186608 81186690 -14085961 + ID SINE ID 6 85 -139 3 1204 880 164 12 6 chr17 81186821 81186981 -14085670 + URR1B DNA MER1_type 65 225 0 3 1204 1302 212 212 36 chr17 81187229 81187616 -14085035 - Lx8 LINE L1 -341 7132 6678 3 1204 396 313 9 0 chr17 81187652 81187767 -14084884 + PB1D10 SINE Alu 1 116 -1 3 1204 32 0 0 0 chr17 81188228 81188260 -14084391 + AT_rich Low_complexity Low_complexity 1 32 0 3 1204 225 0 0 0 chr17 81188370 81188395 -14084256 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 1204 494 341 85 48 chr17 81188409 81188680 -14083971 - B4A SINE B4 -10 282 2 3 1204 802 269 52 0 chr17 81189744 81189956 -14082695 - ID_B1 SINE B4 -1 223 1 3 1204 822 228 50 6 chr17 81190093 81190274 -14082377 + ID_B1 SINE B4 5 193 -31 3 1204 293 277 24 89 chr17 81190172 81190295 -14082356 + PB1D9 SINE Alu 6 120 0 3 1204 368 264 80 80 chr17 81190527 81190753 -14081898 - MIRb SINE MIR -26 242 17 3 1204 646 270 184 89 chr17 81190882 81191252 -14081399 + LTR40a LTR ERVL 98 502 -17 3 1204 336 24 0 0 chr17 81191319 81191360 -14081291 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1204 417 81 0 0 chr17 81191389 81191451 -14081200 + (CA)n Simple_repeat Simple_repeat 2 63 0 3 1204 458 270 95 0 chr17 81191451 81191577 -14081074 - U1 snRNA snRNA -27 138 1 3 1204 657 275 17 52 chr17 81191582 81191812 -14080839 - B4 SINE B4 -70 222 1 3 1204 423 348 16 11 chr17 81192608 81192797 -14079854 - MER3 DNA MER1_type 0 209 20 3 1204 234 275 29 0 chr17 81192958 81193027 -14079624 + (TATG)n Simple_repeat Simple_repeat 2 72 0 3 1204 395 344 75 15 chr17 81193028 81193161 -14079490 - B4A SINE B4 0 292 152 3 1204 476 261 9 0 chr17 81193992 81194107 -14078544 - MER63B DNA AcHobo -3 433 318 3 1204 414 0 0 0 chr17 81194138 81194184 -14078467 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1204 328 221 242 0 chr17 81194191 81194286 -14078365 - RSINE1 SINE B4 -36 129 12 3 1204 198 191 0 0 chr17 81195283 81195325 -14077326 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1204 644 300 41 8 chr17 81196472 81196714 -14075937 + L1MA5 LINE L1 5679 5928 -372 3 1204 187 183 32 32 chr17 81196990 81197052 -14075599 + CT-rich Low_complexity Low_complexity 1 62 0 3 1204 693 142 8 0 chr17 81197061 81197181 -14075470 - B1_Mus2 SINE Alu -7 140 20 3 1204 226 325 25 0 chr17 81197234 81197314 -14075337 - ID4_ SINE ID -1 82 1 3 1204 876 141 173 64 chr17 81198164 81198384 -14074267 - MTC LTR MaLR 0 421 178 3 1204 625 294 112 24 chr17 81198949 81199361 -14073290 - L1MA6 LINE L1 -2 6298 5851 3 1204 304 219 0 40 chr17 81199889 81199965 -14072686 + URR1B DNA MER1_type 153 225 0 3 1204 220 0 0 79 chr17 81200673 81200711 -14071940 + (CCCCCA)n Simple_repeat Simple_repeat 2 36 0 3 1204 555 257 13 45 chr17 81203294 81203449 -14069202 + RSINE1 SINE B4 16 165 0 3 1204 468 91 0 0 chr17 81203463 81203529 -14069122 + (TA)n Simple_repeat Simple_repeat 2 67 0 3 1204 430 277 183 29 chr17 81204072 81204280 -14068371 - B4 SINE B4 -52 240 1 3 1204 361 246 61 43 chr17 81204287 81204402 -14068249 - PB1D10 SINE Alu 0 117 1 3 1204 1271 34 0 0 chr17 81204406 81204553 -14068098 - B1_Mus2 SINE Alu 0 147 1 3 1204 659 251 50 36 chr17 81204675 81204978 -14067673 + MLT2D LTR ERVL 3 293 -222 3 1204 754 308 13 87 chr17 81205015 81205220 -14067431 + B4A SINE B4 2 206 -86 3 1204 550 288 25 12 chr17 81205220 81205382 -14067269 + RSINE1 SINE B4 2 165 0 3 1204 754 308 13 87 chr17 81205382 81205475 -14067176 + B4A SINE B4 207 278 -14 3 1204 670 93 19 0 chr17 81205524 81205632 -14067019 + (TCTA)n Simple_repeat Simple_repeat 4 113 0 3 1204 1238 262 120 21 chr17 81205716 81206192 -14066459 + Lx8 LINE L1 6945 7467 -6 3 1204 305 275 29 100 chr17 81206396 81206606 -14066045 - L1MC4a LINE L1 -4 7878 7684 3 1204 198 191 0 0 chr17 81206993 81207040 -14065611 + T-rich Low_complexity Low_complexity 1 47 0 3 1204 1146 50 14 0 chr17 81207041 81207182 -14065469 - B1_Mus1 SINE Alu -1 147 5 4 1204 307 271 17 93 chr17 81207747 81207865 -14064786 - B3A SINE B2 -34 182 74 4 1204 1230 54 0 0 chr17 81208020 81208167 -14064484 - B1_Mus2 SINE Alu 0 147 1 4 1204 574 188 22 29 chr17 81208173 81208310 -14064341 - ORR1D2 LTR MaLR -224 146 11 4 1204 647 316 41 17 chr17 81210076 81210366 -14062285 + Tigger7 DNA MER2_type 290 586 -1905 4 1204 183 80 0 0 chr17 81210439 81210464 -14062187 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 4 1204 231 36 0 0 chr17 81210468 81210496 -14062155 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1204 406 266 100 9 chr17 81210496 81210606 -14062045 - RSINE1 SINE B4 -43 122 3 4 1204 286 250 0 0 chr17 81210644 81210704 -14061947 + ID4_ SINE ID 5 64 -19 4 1204 281 208 0 25 chr17 81211116 81211195 -14061456 - L1ME4a LINE L1 -5 6119 6043 4 1204 520 268 36 48 chr17 81211379 81211544 -14061107 + RSINE1 SINE B4 1 163 -2 4 1204 655 211 65 70 chr17 81211561 81211760 -14060891 - B3A SINE B2 0 198 1 4 1204 212 327 37 46 chr17 81211920 81212029 -14060622 - L3 LINE CR1 -908 3581 3474 4 1204 253 217 15 77 chr17 81213193 81213258 -14059393 - tRNA-Ala-GCY_ tRNA tRNA -7 68 8 4 1204 750 288 25 17 chr17 81213322 81213562 -14059089 - MTEa LTR MaLR -134 245 4 4 1204 509 292 104 68 chr17 81213658 81213908 -14058743 - MLT1A0 LTR MaLR -8 357 99 4 1204 415 216 229 100 chr17 81214201 81214371 -14058280 - B3A SINE B2 -5 193 2 4 1204 308 217 0 11 chr17 81214416 81214509 -14058142 + CT-rich Low_complexity Low_complexity 1 92 0 4 1204 1158 43 0 0 chr17 81214723 81214862 -14057789 + B1_Mus1 SINE Alu 1 139 -9 4 1204 234 0 0 0 chr17 81214862 81214888 -14057763 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 1204 791 226 121 31 chr17 81214936 81215192 -14057459 + B4 SINE B4 2 280 -12 4 1204 232 295 134 0 chr17 81215205 81215317 -14057334 + B3A SINE B2 31 157 -41 4 1204 300 83 0 0 chr17 81215328 81215376 -14057275 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1204 457 288 12 55 chr17 81215727 81215892 -14056759 + B3A SINE B2 2 159 -39 4 1204 450 0 0 0 chr17 81215913 81215963 -14056688 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1204 315 0 0 0 chr17 81216107 81216142 -14056509 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 4 1204 1618 132 174 0 chr17 81216260 81216577 -14056074 + ORR1B1 LTR MaLR 1 372 -22 4 1204 3248 43 10 10 chr17 81216596 81216998 -14055653 - L1Md_F2 LINE L1 -1 6581 6180 4 1204 31 0 0 0 chr17 81217283 81217314 -14055337 + AT_rich Low_complexity Low_complexity 1 31 0 4 1204 245 282 12 60 chr17 81217597 81217680 -14054971 - B3 SINE B2 -67 149 71 4 1204 980 96 11 11 chr17 81218630 81218809 -14053842 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 4 1204 410 0 20 0 chr17 81218832 81218882 -14053769 + (TCCA)n Simple_repeat Simple_repeat 4 54 0 4 1204 532 214 120 0 chr17 81218894 81219011 -14053640 + MTEa LTR MaLR 35 165 -214 4 1204 797 171 2 0 chr17 81219011 81219437 -14053214 + (CA)n Simple_repeat Simple_repeat 1 427 0 4 1204 484 281 134 0 chr17 81219446 81219610 -14053041 + MTEa LTR MaLR 181 366 -13 4 1204 384 176 30 99 chr17 81219792 81219893 -14052758 + PB1 SINE Alu 32 125 -2 4 1204 204 179 26 0 chr17 81221063 81221102 -14051549 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 4 1204 564 89 0 0 chr17 81221116 81221195 -14051456 + (TA)n Simple_repeat Simple_repeat 1 79 0 4 1204 354 288 0 0 chr17 81221218 81221298 -14051353 - RSINE1 SINE B4 -26 139 60 4 1204 760 294 68 9 chr17 81221341 81221561 -14051090 - B4A SINE B4 -59 233 1 4 1204 29 0 0 0 chr17 81221992 81222021 -14050630 + AT_rich Low_complexity Low_complexity 1 29 0 4 1204 298 256 13 0 chr17 81222051 81222129 -14050522 - ID_B1 SINE B4 -61 163 85 4 1204 950 281 74 30 chr17 81222218 81222622 -14050029 - L1MD3 LINE L1 -15 7980 7559 4 1204 468 247 21 14 chr17 81222914 81223042 -14049609 - PB1D10 SINE Alu -21 128 2 4 1204 1541 193 124 28 chr17 81223445 81223808 -14048843 - MTC LTR MaLR -23 398 1 4 1204 1139 170 109 5 chr17 81223808 81224009 -14048642 - URR1A DNA MER1_type -4 222 1 4 1204 243 0 0 0 chr17 81225122 81225149 -14047502 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1204 21 0 0 0 chr17 81225245 81225266 -14047385 + AT_rich Low_complexity Low_complexity 1 21 0 4 1204 23 0 0 0 chr17 81226049 81226072 -14046579 + AT_rich Low_complexity Low_complexity 1 23 0 4 1204 224 200 0 18 chr17 81226096 81226152 -14046499 + CT-rich Low_complexity Low_complexity 2 56 0 4 1204 758 240 80 0 chr17 81226183 81226358 -14046293 - ID_B1 SINE B4 -34 190 2 4 1204 617 271 38 43 chr17 81226805 81226990 -14045661 + B3 SINE B2 2 185 -31 4 1204 291 85 0 0 chr17 81227012 81227059 -14045592 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1204 24 32 0 0 chr17 81227096 81227127 -14045524 + AT_rich Low_complexity Low_complexity 1 31 0 4 1204 414 0 0 0 chr17 81227743 81227789 -14044862 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 4 1204 571 254 28 21 chr17 81228013 81228158 -14044493 + RSINE1 SINE B4 3 148 -17 4 1204 284 0 0 27 chr17 81228204 81228241 -14044410 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 4 1204 248 294 35 44 chr17 81228834 81228948 -14043703 + L1MB5 LINE L1 5669 5781 -393 4 1204 793 70 79 0 chr17 81228944 81229058 -14043593 - L1_Mus3 LINE L1 -270 6368 6246 4 1204 2109 63 42 7 chr17 81229058 81229347 -14043304 + L1_Mus3 LINE L1 6331 6629 -9 4 1204 928 278 60 6 chr17 81229472 81229604 -14043047 + MTE2b LTR MaLR 5 142 -237 4 1204 437 0 19 0 chr17 81229604 81229657 -14042994 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 1204 928 278 60 6 chr17 81229657 81229843 -14042808 + MTE2b LTR MaLR 143 339 -40 4 1204 376 289 126 16 chr17 81229854 81230044 -14042607 + L1MB5 LINE L1 5879 6089 -85 4 1204 1993 105 77 16 chr17 81230909 81231219 -14041432 - ORR1A4 LTR MaLR 0 329 1 4 1204 207 0 0 0 chr17 81232301 81232324 -14040327 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1204 347 203 12 14 chr17 81232336 81232414 -14040237 - PB1D10 SINE Alu -34 86 1 4 1204 642 13 0 0 chr17 81232646 81232721 -14039930 + (GA)n Simple_repeat Simple_repeat 2 76 0 4 1204 46 45 0 0 chr17 81232723 81232790 -14039861 + AT_rich Low_complexity Low_complexity 1 67 0 4 1204 843 189 113 5 chr17 81232793 81232979 -14039672 - B3 SINE B2 -6 210 5 4 1204 203 56 54 27 chr17 81233570 81233607 -14039044 + (TGGGGG)n Simple_repeat Simple_repeat 4 41 0 4 1204 221 75 0 24 chr17 81233817 81233858 -14038793 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 4 1204 1237 248 57 25 chr17 81234015 81234422 -14038229 - L1MB2 LINE L1 -86 6214 5792 4 1204 254 270 0 0 chr17 81234498 81234561 -14038090 - L1MB2 LINE L1 -648 5532 5470 4 1204 498 129 0 0 chr17 81234589 81234674 -14037977 + (TG)n Simple_repeat Simple_repeat 2 86 0 4 1204 1042 97 6 29 chr17 81234703 81234873 -14037778 - URR1A DNA MER1_type -2 224 59 4 1204 356 321 0 35 chr17 81234904 81235049 -14037602 - B4 SINE B4 -151 141 2 4 1204 2144 131 20 3 chr17 81235704 81236057 -14036594 - ORR1B2 LTR MaLR -8 359 1 4 1204 295 310 89 49 chr17 81236888 81237112 -14035539 - ERVL-E-int LTR ERVL -3069 2688 2456 4 1204 402 297 0 9 chr17 81237253 81237365 -14035286 - PB1D10 SINE Alu -6 111 1 4 1204 959 256 130 11 chr17 81237365 81237718 -14034933 - L1MA7 LINE L1 -21 6276 5887 4 1204 937 271 30 19 chr17 81237790 81238061 -14034590 - B4A SINE B4 -14 278 5 4 1204 1479 262 14 17 chr17 81238384 81238803 -14033848 - L1MA7 LINE L1 -398 5893 5476 4 1204 760 261 64 28 chr17 81238882 81239292 -14033359 - Lx9 LINE L1 -51 7593 7133 4 1204 538 291 54 3 chr17 81239290 81239585 -14033066 - L1MA7 LINE L1 -823 5489 5177 4 1204 490 234 36 0 chr17 81239585 81239696 -14032955 - B1_Mur2 SINE Alu -34 115 1 4 1204 627 231 164 6 chr17 81239696 81239879 -14032772 - L1MA7 LINE L1 -1110 5033 4822 4 1204 442 298 121 17 chr17 81239910 81240324 -14032327 - ERVL-E-int LTR ERVL -4072 1595 1241 4 1204 236 253 37 25 chr17 81240914 81240995 -14031656 + ID4 SINE ID 2 83 0 4 1204 905 272 55 0 chr17 81241082 81241146 -14031505 - B4A SINE B4 -4 288 224 4 1204 423 0 0 0 chr17 81241146 81241193 -14031458 + (TTA)n Simple_repeat Simple_repeat 1 47 0 4 1204 905 272 55 0 chr17 81241193 81241363 -14031288 - B4A SINE B4 -69 223 42 4 1204 516 310 58 0 chr17 81241365 81241520 -14031131 - B3A SINE B2 -33 165 2 4 1204 263 197 65 13 chr17 81241933 81242010 -14030641 - MLT1N2 LTR MaLR -2 560 480 4 1204 284 335 0 2 chr17 81242304 81242399 -14030252 - ID4 SINE ID -50 102 9 4 1204 868 270 5 20 chr17 81242808 81243012 -14029639 + B4A SINE B4 14 214 -78 4 1204 294 154 110 0 chr17 81243065 81243156 -14029495 + RMER17C LTR ERVK 184 284 -126 4 1204 381 22 0 0 chr17 81243182 81243228 -14029423 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1204 225 182 0 35 chr17 81243603 81243655 -14028996 + (TCTG)n Simple_repeat Simple_repeat 3 52 0 4 1204 345 82 0 0 chr17 81243655 81243704 -14028947 + (TATG)n Simple_repeat Simple_repeat 4 52 0 4 1204 245 109 22 0 chr17 81243709 81243755 -14028896 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 4 1204 254 250 86 12 chr17 81243756 81243837 -14028814 - MLT2B4 LTR ERVL -61 495 409 4 1204 303 182 0 18 chr17 81243937 81243993 -14028658 + PB1D10 SINE Alu 26 80 -37 4 1204 568 274 46 78 chr17 81243972 81244190 -14028461 - MLT2B4 LTR ERVL -339 217 7 4 1204 366 317 44 48 chr17 81245074 81245391 -14027260 - MLT1A1 LTR MaLR -3 405 59 4 1204 342 253 99 0 chr17 81245700 81245791 -14026860 + B3 SINE B2 103 202 -14 4 1204 468 0 0 0 chr17 81245801 81245853 -14026798 + (GA)n Simple_repeat Simple_repeat 1 52 0 4 1204 432 0 0 0 chr17 81246318 81246366 -14026285 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1204 315 0 0 0 chr17 81247063 81247098 -14025553 + (A)n Simple_repeat Simple_repeat 1 35 0 4 1204 1260 27 0 13 chr17 81247266 81247416 -14025235 + B1_Mus1 SINE Alu 1 148 0 4 1204 300 212 0 0 chr17 81248058 81248124 -14024527 + (TG)n Simple_repeat Simple_repeat 1 66 0 4 1204 433 308 16 31 chr17 81248124 81248315 -14024336 + MLT1A1 LTR MaLR 219 406 -2 4 1204 791 292 26 84 chr17 81248931 81249241 -14023410 + B4A SINE B4 1 292 0 5 1204 813 104 0 0 chr17 81249248 81249392 -14023259 + (CA)n Simple_repeat Simple_repeat 1 144 0 5 1204 474 248 22 67 chr17 81250280 81250414 -14022237 + B1F SINE Alu 3 130 -19 5 1204 183 209 47 0 chr17 81251002 81251045 -14021606 + L2c LINE L2 3246 3290 -97 5 1204 4608 112 22 3 chr17 81251773 81252483 -14020168 + RMER19A LTR ERVK 14 737 0 5 1204 242 254 17 17 chr17 81252518 81252578 -14020073 + PB1D10 SINE Alu 12 71 -46 5 1204 22 80 0 0 chr17 81252630 81252680 -14019971 + AT_rich Low_complexity Low_complexity 1 50 0 5 1204 557 242 71 0 chr17 81252759 81252957 -14019694 - Tigger7 DNA MER2_type -42 2449 2238 5 1204 656 274 49 0 chr17 81252975 81253139 -14019512 - MTE2b LTR MaLR -2 377 206 5 1204 2217 95 54 17 chr17 81253284 81253638 -14019013 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1204 56247 29 10 2 chr17 81253638 81260059 -14012592 + IAPEz-int LTR ERVK 8 6478 -3 5 1204 2217 95 54 17 chr17 81260063 81260417 -14012234 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1204 441 200 77 39 chr17 81260680 81260810 -14011841 - MTE2b LTR MaLR -131 248 114 5 1204 2511 136 2 20 chr17 81260820 81261219 -14011432 - ORR1B1 LTR MaLR 0 394 3 5 1204 922 267 89 48 chr17 81261222 81261650 -14011001 - RMER13B LTR ERVK -43 915 495 5 1204 660 168 28 96 chr17 81261655 81261833 -14010818 - RMER13B LTR ERVK -742 166 1 5 1204 400 262 9 9 chr17 81261836 81261944 -14010707 - MTE2b LTR MaLR -271 108 1 5 1204 744 237 72 20 chr17 81263237 81263487 -14009164 + L1_Mur3 LINE L1 448 710 -7002 5 1204 5213 184 80 57 chr17 81263455 81264495 -14008156 - Lx7 LINE L1 -655 7041 6019 5 1204 507 17 0 0 chr17 81264495 81264555 -14008096 + (TCCA)n Simple_repeat Simple_repeat 4 63 0 5 150 5213 184 80 57 chr17 81264555 81264721 -14007930 - Lx7 LINE L1 -1678 6018 5808 5 1205 817 285 155 42 chr17 81264741 81264861 -14007790 - Lx8 LINE L1 -10 7463 7334 5 1205 495 33 0 0 chr17 81264861 81264922 -14007729 + (TC)n Simple_repeat Simple_repeat 2 62 0 5 1205 817 285 155 42 chr17 81264922 81265226 -14007425 - Lx8 LINE L1 -140 7333 6992 5 1205 211 330 59 40 chr17 81265239 81265340 -14007311 - B4A SINE B4 -99 193 91 5 1205 249 243 33 13 chr17 81266295 81266445 -14006206 + CT-rich Low_complexity Low_complexity 2 154 0 5 1205 327 98 0 0 chr17 81266875 81266926 -14005725 - URR1B DNA MER1_type -3 222 172 5 1205 373 91 346 48 chr17 81266993 81267097 -14005554 - B2_Mm2 SINE B2 -14 181 47 5 1205 23 0 0 0 chr17 81267133 81267156 -14005495 + AT_rich Low_complexity Low_complexity 1 23 0 5 1205 207 0 0 0 chr17 81267169 81267192 -14005459 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1205 6749 102 60 15 chr17 81267194 81267303 -14005348 - Lx LINE L1 -17 6637 6535 5 1205 180 0 0 0 chr17 81267303 81267323 -14005328 + (CCCA)n Simple_repeat Simple_repeat 2 21 0 5 1205 6749 106 56 13 chr17 81267323 81268365 -14004286 - Lx LINE L1 -120 6534 5441 5 1205 1402 126 13 4 chr17 81268364 81268595 -14004056 - L1_Mur2 LINE L1 -571 5306 5074 5 1205 1205 104 35 0 chr17 81268596 81268769 -14003882 - B2_Mm1t SINE B2 -14 179 1 5 1205 602 168 233 7 chr17 81268769 81268919 -14003732 - URR1B DNA MER1_type -41 184 1 5 1205 300 273 12 38 chr17 81268977 81269057 -14003594 - ID SINE ID -146 78 1 5 1205 1143 69 0 7 chr17 81269079 81269225 -14003426 - B1_Mus2 SINE Alu -2 145 1 5 1205 280 317 88 33 chr17 81269252 81269526 -14003125 - L1M5 LINE L1 -377 5863 5575 5 1205 281 255 60 20 chr17 81269779 81269879 -14002772 + MER2 DNA MER2_type 115 218 -127 5 1205 264 186 51 0 chr17 81269934 81269993 -14002658 + MER2 DNA MER2_type 204 265 -80 5 1205 863 218 92 10 chr17 81270004 81270199 -14002452 - B3 SINE B2 -4 212 2 5 1205 391 209 0 0 chr17 81270621 81270688 -14001963 + ID4_ SINE ID 4 70 -13 5 1205 1222 253 71 3 chr17 81270771 81271124 -14001527 - MTEa LTR MaLR -2 377 1 5 1205 238 344 70 92 chr17 81272046 81272318 -14000333 + ORR1E LTR MaLR 94 359 0 5 1205 267 310 137 65 chr17 81272594 81272856 -13999795 - L1MB5 LINE L1 -7 6167 5887 5 1205 995 190 83 0 chr17 81273107 81273323 -13999328 + ORR1D1 LTR MaLR 136 369 -5 5 1205 409 265 38 8 chr17 81274109 81274242 -13998409 - MER3 DNA MER1_type -55 154 18 5 1205 228 67 0 0 chr17 81275127 81275157 -13997494 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 5 1205 224 369 19 19 chr17 81275407 81275567 -13997084 + MIR3 SINE MIR 34 193 -15 5 1205 258 312 87 6 chr17 81275615 81275776 -13996875 - MER53 DNA hAT -1 192 19 5 1205 800 276 64 5 chr17 81278134 81278338 -13994313 + ID_B1 SINE B4 4 219 -5 5 1205 287 311 49 0 chr17 81278396 81278518 -13994133 + Arthur1 DNA Tip100 888 1015 -2932 5 1205 2459 307 90 12 chr17 81278564 81279601 -13993050 + Arthur1 DNA Tip100 169 1286 -2661 5 1205 316 333 23 74 chr17 81279859 81279943 -13992708 - MER5A1 DNA MER1_type 0 166 88 5 1205 428 231 45 18 chr17 81279943 81280053 -13992598 - PB1D10 SINE Alu 0 117 5 5 1205 316 333 23 74 chr17 81280053 81280143 -13992508 - MER5A1 DNA MER1_type -79 87 1 5 1205 485 299 145 13 chr17 81280584 81280818 -13991833 - B4 SINE B4 -27 265 1 5 1205 185 361 0 0 chr17 81280971 81281068 -13991583 - MIR SINE MIR 0 262 166 5 1205 718 299 128 47 chr17 81281611 81282289 -13990362 - L1ME2z LINE L1 -4 6440 5708 5 1205 336 24 0 0 chr17 81282291 81282332 -13990319 + (TC)n Simple_repeat Simple_repeat 2 42 0 5 1205 838 144 0 8 chr17 81282782 81282915 -13989736 + B1_Mur3 SINE Alu 18 149 0 5 1205 200 171 0 91 chr17 81282918 81282995 -13989656 + A-rich Low_complexity Low_complexity 1 70 0 5 1205 279 248 142 9 chr17 81283684 81283790 -13988861 + MER117 DNA MER1_type 45 164 -33 5 1205 238 228 0 34 chr17 81285244 81285303 -13987348 + B1_Mus2 SINE Alu 3 59 -88 5 1205 324 64 0 0 chr17 81285334 81285381 -13987270 + (CCTG)n Simple_repeat Simple_repeat 2 48 0 5 1205 318 250 45 0 chr17 81286039 81286127 -13986524 + L1MA5A LINE L1 5881 5972 -328 5 1205 353 211 80 22 chr17 81286196 81286332 -13986319 + L1MA5A LINE L1 6155 6300 0 5 1205 483 264 44 97 chr17 81287527 81287576 -13985075 - B3A SINE B2 -1 197 157 5 1205 261 0 0 0 chr17 81287576 81287605 -13985046 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1205 483 304 87 22 chr17 81287605 81287761 -13984890 - B3A SINE B2 -26 172 1 5 1205 23 0 0 0 chr17 81287932 81287955 -13984696 + AT_rich Low_complexity Low_complexity 1 23 0 5 1205 189 0 0 0 chr17 81288526 81288547 -13984104 + (CCCCCA)n Simple_repeat Simple_repeat 3 23 0 5 1205 578 211 8 21 chr17 81289754 81289995 -13982656 + (CATATA)n Simple_repeat Simple_repeat 1 237 0 5 1205 755 208 0 45 chr17 81290343 81290499 -13982152 - B1_Mur3 SINE Alu 0 149 1 5 1205 782 245 85 0 chr17 81290625 81290813 -13981838 - ID_B1 SINE B4 -20 204 1 5 1205 1445 149 5 0 chr17 81292572 81292793 -13979858 + URR1B DNA MER1_type 4 225 0 5 1205 817 93 17 23 chr17 81293178 81293353 -13979298 + (TCTA)n Simple_repeat Simple_repeat 1 174 0 5 1205 192 262 135 36 chr17 81293518 81293629 -13979022 + L2b LINE L2 3253 3374 -1 5 1205 1225 91 0 11 chr17 81293919 81294097 -13978554 - L1_Mus4 LINE L1 -4 6632 6457 5 1205 219 273 0 0 chr17 81294114 81294169 -13978482 + (TA)n Simple_repeat Simple_repeat 1 55 0 5 1205 353 236 8 0 chr17 81294215 81294342 -13978309 + (TG)n Simple_repeat Simple_repeat 1 128 0 5 1205 592 306 57 0 chr17 81294425 81294634 -13978017 - ID_B1 SINE B4 -1 223 3 5 1205 1610 216 63 3 chr17 81294991 81295340 -13977311 + ORR1D1 LTR MaLR 5 374 0 5 1205 257 279 154 0 chr17 81295391 81295495 -13977156 + MLT1K LTR MaLR 453 572 -23 5 1205 739 232 0 6 chr17 81296661 81296826 -13975825 - B3A SINE B2 -33 165 2 5 1205 222 37 0 0 chr17 81296924 81296951 -13975700 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1205 238 300 133 37 chr17 81297531 81297666 -13974985 - L2c LINE L2 -23 3364 3205 5 1205 1912 140 69 53 chr17 81298128 81298489 -13974162 + ORR1B2 LTR MaLR 1 367 0 5 1205 545 193 310 0 chr17 81300189 81300334 -13972317 - ID_B1 SINE B4 -34 190 1 5 1205 389 278 80 46 chr17 81300876 81301027 -13971624 - RSINE1 SINE B4 -7 158 3 5 1205 387 0 0 0 chr17 81301110 81301153 -13971498 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1205 315 386 36 5 chr17 81301653 81301877 -13970774 - Charlie23a DNA MER1_type -5 334 104 5 1205 220 307 11 33 chr17 81302306 81302397 -13970254 - B1_Mus1 SINE Alu -59 89 1 5 1205 403 257 9 27 chr17 81304688 81304800 -13967851 + Tigger14a DNA MER2_type 56 165 -159 5 1205 1009 65 0 14 chr17 81305202 81305331 -13967320 + B1_Mus1 SINE Alu 11 139 -9 5 1205 303 49 0 0 chr17 81305331 81305372 -13967279 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1205 1454 195 121 19 chr17 81305420 81305792 -13966859 - MTD LTR MaLR 0 419 10 5 1205 708 271 23 31 chr17 81305812 81306071 -13966580 - L1MA9 LINE L1 -13 6299 6043 5 1205 1205 62 7 0 chr17 81306427 81306573 -13966078 + B1_Mm SINE Alu 1 147 0 5 1205 231 60 39 20 chr17 81306580 81306631 -13966020 + (CAAAA)n Simple_repeat Simple_repeat 3 54 0 5 1205 243 324 0 26 chr17 81306650 81306687 -13965964 + polypurine Low_complexity Low_complexity 2 38 0 5 1205 745 142 34 7 chr17 81306687 81306836 -13965815 + Lx LINE L1 6502 6654 0 5 1205 243 324 0 26 chr17 81306836 81306874 -13965777 + polypurine Low_complexity Low_complexity 39 75 0 5 1205 768 94 8 15 chr17 81306874 81307004 -13965647 + (GAA)n Simple_repeat Simple_repeat 2 130 0 5 1205 551 208 42 84 chr17 81307027 81307106 -13965545 + B1_Mur1 SINE Alu 8 79 -70 5 1205 381 93 0 0 chr17 81307106 81307160 -13965491 + (CATG)n Simple_repeat Simple_repeat 3 56 0 5 1205 551 208 42 84 chr17 81307160 81307222 -13965429 + B1_Mur1 SINE Alu 80 143 -6 5 1205 428 306 232 10 chr17 81307253 81307465 -13965186 - MER2 DNA MER2_type -1 344 83 5 1205 713 252 40 57 chr17 81307465 81307692 -13964959 + ID_B1 SINE B4 2 224 0 5 1205 428 289 84 0 chr17 81307692 81307767 -13964884 - MER2 DNA MER2_type -263 82 5 5 1205 210 71 0 0 chr17 81307933 81307961 -13964690 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 5 1205 713 213 92 13 chr17 81307964 81308116 -13964535 - RSINE1 SINE B4 0 165 2 5 1205 22 35 0 0 chr17 81308262 81308291 -13964360 + AT_rich Low_complexity Low_complexity 1 29 0 5 1205 581 324 35 31 chr17 81308337 81308566 -13964085 + B4A SINE B4 3 232 -60 5 1205 5396 101 31 10 chr17 81308567 81310234 -13962417 + L1Md_F LINE L1 204 1903 -3980 6 1205 6629 67 23 5 chr17 81310234 81311102 -13961549 + L1Md_F2 LINE L1 5689 6572 -10 6 1205 396 0 0 0 chr17 81311156 81311200 -13961451 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1205 334 333 13 13 chr17 81311205 81311357 -13961294 + (CATATA)n Simple_repeat Simple_repeat 4 155 0 6 1205 945 249 24 0 chr17 81314014 81314219 -13958432 - B3 SINE B2 -5 211 2 6 1205 792 335 22 4 chr17 81314396 81314666 -13957985 + B4A SINE B4 6 280 -12 6 1205 2280 74 51 0 chr17 81314690 81315001 -13957650 + IAPLTR2b LTR ERVK 1 327 0 6 1205 543 250 15 0 chr17 81316213 81316349 -13956302 - MTE-int LTR MaLR -40 1540 1403 6 1205 270 286 0 0 chr17 81316414 81316491 -13956160 - MTE-int LTR MaLR -951 629 553 6 1205 1130 117 6 0 chr17 81316836 81317015 -13955636 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 6 1205 186 167 0 0 chr17 81317015 81317051 -13955600 + CT-rich Low_complexity Low_complexity 2 37 0 6 1205 3122 166 35 26 chr17 81317063 81317669 -13954982 + RMER19C LTR ERVK 1 611 0 6 1205 195 283 83 42 chr17 81317934 81318030 -13954621 + MIR SINE MIR 18 117 -91 6 1205 261 0 0 0 chr17 81318047 81318076 -13954575 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 1205 595 208 136 0 chr17 81318094 81318219 -13954432 - B1_Mus2 SINE Alu -5 142 1 6 1205 653 263 62 49 chr17 81318322 81318566 -13954085 - B4A SINE B4 -5 287 41 6 1205 194 333 45 74 chr17 81318692 81318846 -13953805 + MIR SINE MIR 38 189 -73 6 1205 296 376 60 9 chr17 81319523 81319738 -13952913 - MIR SINE MIR -5 257 32 6 1205 204 40 0 0 chr17 81321341 81321366 -13951285 + (GGGGA)n Simple_repeat Simple_repeat 3 27 0 6 1205 495 0 0 0 chr17 81321603 81321658 -13950993 + (TAA)n Simple_repeat Simple_repeat 2 56 0 6 1205 228 297 16 0 chr17 81321729 81321793 -13950858 - ID4_ SINE ID 0 83 19 6 1205 638 258 84 58 chr17 81321973 81322199 -13950452 - L1MA9 LINE L1 0 6312 6081 6 1205 885 266 80 12 chr17 81322200 81322451 -13950200 - ORR1D2 LTR MaLR -102 268 1 6 1205 270 253 84 0 chr17 81322461 81322544 -13950107 - L1MA9 LINE L1 -354 5937 5848 6 1205 239 250 0 62 chr17 81322926 81322990 -13949661 - L1MA9 LINE L1 -469 5843 5784 6 1205 207 0 0 0 chr17 81323018 81323041 -13949610 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 6 1205 198 103 0 0 chr17 81323059 81323088 -13949563 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1205 220 258 45 15 chr17 81323090 81323157 -13949494 - ID4 SINE ID -13 70 2 6 1205 246 258 242 0 chr17 81323188 81323308 -13949343 + B1F1 SINE Alu 1 149 0 6 1205 844 160 35 0 chr17 81324466 81324610 -13948041 + B1_Mur4 SINE Alu 1 149 -1 6 1205 725 226 62 33 chr17 81324783 81324994 -13947657 + ID_B1 SINE B4 3 219 -5 6 1205 22 70 0 0 chr17 81325311 81325354 -13947297 + AT_rich Low_complexity Low_complexity 1 43 0 6 1205 256 139 0 0 chr17 81325564 81325607 -13947044 - URR1B DNA MER1_type -182 43 1 6 1205 206 333 35 0 chr17 81325867 81325924 -13946727 + MIRb SINE MIR 93 151 -117 6 1205 3651 26 28 5 chr17 81326170 81326596 -13946055 - RLTR10C LTR ERVK 0 436 1 6 1205 545 293 101 47 chr17 81326963 81327221 -13945430 - B4A SINE B4 -18 274 3 6 1205 526 337 21 35 chr17 81327317 81327606 -13945045 - MER74A LTR ERVL 0 558 274 6 1205 231 125 0 0 chr17 81327710 81327750 -13944901 + (TCTA)n Simple_repeat Simple_repeat 2 41 0 6 1205 964 84 12 0 chr17 81327805 81327971 -13944680 + (TCTA)n Simple_repeat Simple_repeat 1 168 0 6 1205 862 175 6 6 chr17 81327974 81328152 -13944499 + CT-rich Low_complexity Low_complexity 3 180 0 6 1205 210 143 0 0 chr17 81328199 81328234 -13944417 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1205 255 270 0 75 chr17 81328239 81328319 -13944332 - RSINE1 SINE B4 -90 75 2 6 1205 399 21 0 0 chr17 81328766 81328814 -13943837 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 6 1205 661 287 85 80 chr17 81329441 81329831 -13942820 - MLT1D LTR MaLR -9 496 105 6 1205 968 268 32 12 chr17 81329937 81330190 -13942461 - B4 SINE B4 -26 266 9 6 1205 342 286 45 0 chr17 81330527 81330639 -13942012 + BC1_Mm scRNA scRNA 8 124 -28 6 1205 294 70 34 34 chr17 81332348 81332407 -13940244 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 6 1205 539 322 145 37 chr17 81332450 81333293 -13939358 + L2 LINE L2 1715 2693 -726 6 1205 299 314 65 97 chr17 81333334 81333581 -13939070 + MIR SINE MIR 23 261 -1 6 1205 580 287 51 17 chr17 81333659 81333836 -13938815 + ID_B1 SINE B4 35 217 -7 6 1205 30 0 0 0 chr17 81333846 81333876 -13938775 + AT_rich Low_complexity Low_complexity 1 30 0 6 1205 655 178 28 44 chr17 81334234 81334416 -13938235 + Lx7 LINE L1 7369 7547 -149 6 1205 339 25 0 0 chr17 81334425 81334465 -13938186 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 6 1205 31 26 0 0 chr17 81334841 81334879 -13937772 + AT_rich Low_complexity Low_complexity 1 38 0 6 1205 511 174 73 16 chr17 81336168 81336291 -13936360 + Lx4A LINE L1 6929 7058 0 6 1205 233 284 39 87 chr17 81336833 81336960 -13935691 - MIRb SINE MIR -9 259 139 6 1205 214 264 38 125 chr17 81336998 81337158 -13935493 + L2b LINE L2 2234 2379 -1040 6 1205 235 324 14 0 chr17 81337161 81337232 -13935419 - ID4 SINE ID -11 72 1 6 1205 208 53 53 0 chr17 81337391 81337429 -13935222 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 6 1205 396 360 179 27 chr17 81338132 81338580 -13934071 + L2b LINE L2 2366 2881 -538 6 1205 214 343 34 60 chr17 81339680 81339829 -13932822 + L2b LINE L2 3222 3366 -9 6 1205 324 48 0 0 chr17 81340183 81340225 -13932426 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1205 193 375 113 29 chr17 81341098 81341337 -13931314 + L2c LINE L2 3086 3344 -43 6 1205 252 241 106 57 chr17 81341887 81342010 -13930641 + RMER12 LTR ERVK 709 837 -485 6 1205 221 360 0 26 chr17 81343607 81343759 -13928892 + G-rich Low_complexity Low_complexity 1 148 0 6 1205 262 301 11 28 chr17 81343766 81343947 -13928704 + (CGGG)n Simple_repeat Simple_repeat 1 178 0 6 1205 203 263 0 17 chr17 81344577 81344635 -13928016 + CT-rich Low_complexity Low_complexity 3 59 0 6 1205 432 0 0 0 chr17 81345943 81345991 -13926660 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 1205 242 317 28 28 chr17 81346141 81346248 -13926403 - L3 LINE CR1 -3 4486 4380 6 1205 205 152 0 42 chr17 81347436 81347484 -13925167 + T-rich Low_complexity Low_complexity 2 47 0 6 1205 600 14 0 0 chr17 81347602 81347671 -13924980 + (TCCC)n Simple_repeat Simple_repeat 4 72 0 6 1205 817 223 77 34 chr17 81347671 81347880 -13924771 - ID_B1 SINE B4 -4 220 3 6 1205 258 220 57 61 chr17 81348047 81348227 -13924424 - MTEb LTR MaLR -5 374 201 6 1205 853 200 102 11 chr17 81348649 81348836 -13923815 - B3 SINE B2 -7 209 6 6 1205 193 321 124 35 chr17 81349163 81349276 -13923375 - L2a LINE L2 0 3426 3304 6 1205 180 0 0 0 chr17 81349550 81349570 -13923081 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 6 1205 213 39 0 0 chr17 81350036 81350062 -13922589 + (GA)n Simple_repeat Simple_repeat 1 26 0 6 1205 549 279 17 144 chr17 81350396 81350501 -13922150 + B3A SINE B2 20 103 -95 6 1205 378 0 0 0 chr17 81350501 81350543 -13922108 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1205 549 279 17 144 chr17 81350543 81350617 -13922034 + B3A SINE B2 104 176 -22 6 1205 348 24 0 0 chr17 81350619 81350660 -13921991 + (TC)n Simple_repeat Simple_repeat 1 41 0 6 1205 208 139 0 0 chr17 81351505 81351541 -13921110 + (TTTTTA)n Simple_repeat Simple_repeat 2 37 0 6 1205 529 233 137 60 chr17 81352334 81352349 -13920302 - B3A SINE B2 0 198 184 6 1205 189 0 0 0 chr17 81352349 81352370 -13920281 + (TG)n Simple_repeat Simple_repeat 1 21 0 6 1205 529 233 137 60 chr17 81352370 81352537 -13920114 - B3A SINE B2 -15 183 2 6 1205 21 0 0 0 chr17 81353060 81353081 -13919570 + AT_rich Low_complexity Low_complexity 1 21 0 6 1205 864 190 0 0 chr17 81353825 81354254 -13918397 + GA-rich Low_complexity Low_complexity 1 429 0 6 1205 918 144 0 0 chr17 81354257 81354437 -13918214 + (GA)n Simple_repeat Simple_repeat 1 180 0 6 1205 486 227 0 0 chr17 81354459 81354865 -13917786 + GA-rich Low_complexity Low_complexity 1 406 0 6 1205 334 329 15 0 chr17 81355277 81355414 -13917237 + CT-rich Low_complexity Low_complexity 2 140 0 6 1205 320 328 68 106 chr17 81356391 81356684 -13915967 - MLT1L LTR MaLR -2 608 312 6 1205 771 244 170 44 chr17 81358249 81358636 -13914015 + L1MB5 LINE L1 5649 6088 -86 6 1205 223 311 101 76 chr17 81358686 81358923 -13913728 + L2 LINE L2 2839 3081 -338 6 1205 379 365 83 31 chr17 81359055 81359442 -13913209 - Lx8 LINE L1 0 7473 7067 6 1205 1991 299 101 14 chr17 81359518 81360173 -13912478 - Lx8 LINE L1 -557 6916 6205 6 1205 1145 298 28 48 chr17 81360319 81360798 -13911853 + MER44B DNA MER2_type 27 549 -1 6 1205 404 262 65 48 chr17 81361705 81361873 -13910778 + MIR3 SINE MIR 36 206 -2 6 1205 222 192 0 0 chr17 81362034 81362086 -13910565 + T-rich Low_complexity Low_complexity 1 52 0 6 1205 300 333 106 25 chr17 81363694 81363854 -13908797 - Tigger15a DNA TcMar -52 663 491 6 1205 618 117 0 0 chr17 81364820 81364931 -13907720 + (TC)n Simple_repeat Simple_repeat 2 112 0 6 1205 1192 163 47 0 chr17 81365230 81365445 -13907206 + URR1B DNA MER1_type 1 225 0 6 1205 423 238 436 5 chr17 81365707 81365906 -13906745 + B4 SINE B4 2 284 -8 6 1205 246 32 0 0 chr17 81365929 81365960 -13906691 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1205 423 0 0 0 chr17 81365960 81366006 -13906645 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 1205 210 143 0 0 chr17 81366210 81366245 -13906406 + (A)n Simple_repeat Simple_repeat 1 35 0 6 1205 414 279 65 29 chr17 81366482 81366652 -13905999 - L1ME4a LINE L1 -1 6123 5948 6 1205 279 299 115 28 chr17 81366932 81367114 -13905537 + L2c LINE L2 2915 3112 -275 6 1205 836 156 156 0 chr17 81367550 81367704 -13904947 - URR1A DNA MER1_type -2 224 47 6 1205 1119 216 9 22 chr17 81368250 81368473 -13904178 - ID_B1 SINE B4 -4 220 1 6 1205 226 329 0 0 chr17 81369255 81369334 -13903317 + G-rich Low_complexity Low_complexity 1 79 0 7 1205 281 294 34 45 chr17 81370454 81370543 -13902108 + MIRb SINE MIR 99 186 -82 7 1205 472 256 183 47 chr17 81371274 81371487 -13901164 - L1MA5 LINE L1 -7 6293 6052 7 1205 465 19 0 0 chr17 81371535 81371589 -13901062 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 1205 872 252 14 5 chr17 81371621 81371774 -13900877 - B4A SINE B4 -58 234 81 7 1205 204 40 0 0 chr17 81371774 81371799 -13900852 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 7 1205 872 252 14 5 chr17 81371799 81371868 -13900783 - B4A SINE B4 -212 80 11 7 1205 322 243 0 0 chr17 81373133 81373207 -13899444 + L1M3e LINE L1 1973 2046 -4984 7 1205 331 348 43 31 chr17 81373480 81373643 -13899008 + L1MA9 LINE L1 1162 1326 -5058 7 1205 1300 169 0 9 chr17 81373644 81373859 -13898792 + B3 SINE B2 1 213 -3 7 1205 1041 303 26 125 chr17 81373869 81374435 -13898216 + L1MA9 LINE L1 2572 3081 -3295 7 1205 1260 266 135 29 chr17 81374449 81375100 -13897551 + L1MA9 LINE L1 4521 5240 -1136 7 1205 917 68 0 0 chr17 81375107 81375225 -13897426 + B1_Mus2 SINE Alu 30 147 0 7 1205 267 31 0 0 chr17 81375225 81375257 -13897394 + (A)n Simple_repeat Simple_repeat 1 32 0 7 1205 956 216 14 0 chr17 81375278 81375486 -13897165 + B3 SINE B2 1 211 -5 7 1205 385 324 53 5 chr17 81375516 81375771 -13896880 + L1MA9 LINE L1 5269 5538 -841 7 1205 441 319 122 26 chr17 81376049 81376393 -13896258 + L1MA9 LINE L1 5914 6290 -258 7 1205 231 252 75 28 chr17 81376444 81376550 -13896101 + L1M3 LINE L1 5097 5207 -933 7 1205 328 178 23 57 chr17 81376564 81376655 -13895996 + L1M3 LINE L1 2763 2855 -3285 7 1205 435 182 80 18 chr17 81376659 81376771 -13895880 + L1M3 LINE L1 4292 4410 -1730 7 1205 559 205 111 32 chr17 81376776 81376874 -13895777 + L1MA9 LINE L1 6041 6150 -162 7 1205 294 87 0 0 chr17 81376874 81376920 -13895731 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1205 559 205 111 32 chr17 81376920 81377038 -13895613 + L1MA9 LINE L1 6151 6274 -38 7 1205 864 145 314 0 chr17 81377518 81377690 -13894961 - URR1A DNA MER1_type 0 226 1 7 1205 234 0 0 0 chr17 81378254 81378280 -13894371 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 1205 327 202 343 0 chr17 81378282 81378381 -13894270 - B1_Mus2 SINE Alu -14 133 1 7 1205 555 53 0 0 chr17 81378627 81378702 -13893949 + (GA)n Simple_repeat Simple_repeat 2 76 0 7 1205 672 258 173 26 chr17 81378776 81378967 -13893684 + ID_B1 SINE B4 6 224 0 7 1205 706 162 338 0 chr17 81378981 81379141 -13893510 + B3 SINE B2 3 216 0 7 1205 450 0 0 0 chr17 81380133 81380183 -13892468 + (TC)n Simple_repeat Simple_repeat 1 50 0 7 1205 527 183 226 0 chr17 81380340 81380455 -13892196 + B1F2 SINE Alu 1 141 -8 7 1205 625 198 157 16 chr17 81380478 81380663 -13891988 + B3 SINE B2 1 211 -5 7 1205 889 251 15 5 chr17 81380763 81380967 -13891684 - B3 SINE B2 -9 207 2 7 1205 314 324 83 21 chr17 81381351 81381496 -13891155 - MIRb SINE MIR -82 186 33 7 1205 572 332 50 21 chr17 81383240 81383520 -13889131 - B4A SINE B4 -3 289 2 7 1205 524 291 56 15 chr17 81383527 81383760 -13888891 - L1M4 LINE L1 -2213 3933 3684 7 1205 563 272 10 120 chr17 81383877 81384012 -13888639 + B4 SINE B4 85 216 -76 7 1205 558 43 0 0 chr17 81384012 81384081 -13888570 + (GA)n Simple_repeat Simple_repeat 2 70 0 7 1205 563 272 10 120 chr17 81384081 81384137 -13888514 + B4 SINE B4 217 255 -37 7 1205 656 196 166 70 chr17 81384148 81384449 -13888202 - L1M4 LINE L1 -2436 3710 3381 7 1205 468 0 0 0 chr17 81384625 81384677 -13887974 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 1205 453 286 70 43 chr17 81385917 81386103 -13886548 - B3A SINE B2 0 198 8 7 1205 705 163 95 15 chr17 81386740 81386877 -13885774 + B1_Mur4 SINE Alu 3 150 0 7 1205 313 179 0 37 chr17 81386877 81386958 -13885693 + GA-rich Low_complexity Low_complexity 3 80 0 7 1205 307 254 82 116 chr17 81387658 81387805 -13884846 + MT2B LTR ERVL 114 255 -346 7 1205 891 150 7 7 chr17 81387709 81387850 -13884801 + B1_Mur4 SINE Alu 9 149 -1 7 1205 1323 167 18 0 chr17 81388082 81388304 -13884347 - URR1A DNA MER1_type 0 226 1 7 1205 424 312 27 14 chr17 81390349 81390495 -13882156 - B1F1 SINE Alu -1 148 1 7 1205 731 275 50 80 chr17 81391521 81391613 -13881038 + B4 SINE B4 2 85 -207 7 1205 1279 95 39 16 chr17 81391613 81391795 -13880856 + B2_Mm2 SINE B2 1 186 -9 7 1205 731 275 50 80 chr17 81391795 81392002 -13880649 + B4 SINE B4 86 292 0 7 1205 411 21 0 0 chr17 81392163 81392211 -13880440 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1205 329 296 102 0 chr17 81392212 81392320 -13880331 - RSINE1 SINE B4 -42 123 5 7 1205 835 319 48 22 chr17 81392659 81392970 -13879681 - MER46C DNA MER2_type 0 338 20 7 1205 912 251 64 5 chr17 81393910 81394114 -13878537 - B3 SINE B2 0 216 1 7 1205 333 299 10 0 chr17 81394472 81394569 -13878082 + MLT1B LTR MaLR 4 101 -289 7 1205 1170 88 6 6 chr17 81394578 81394738 -13877913 + B2_Mm1a SINE B2 1 160 -33 7 1205 396 0 0 0 chr17 81394738 81394782 -13877869 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 7 1205 492 333 34 6 chr17 81394883 81395061 -13877590 + MLT1B LTR MaLR 208 390 0 7 1205 649 233 0 33 chr17 81395203 81395354 -13877297 - B1_Mur2 SINE Alu -1 148 3 7 1205 357 24 0 0 chr17 81395392 81395434 -13877217 + (T)n Simple_repeat Simple_repeat 1 42 0 7 1206 182 37 0 36 chr17 81395963 81395973 -13876678 + (TTTTG)n Simple_repeat Simple_repeat 2 11 0 7 1206 2228 126 6 0 chr17 81395973 81396298 -13876353 - ORR1A2 LTR MaLR 0 327 1 7 1206 182 37 0 36 chr17 81396298 81396315 -13876336 + (TTTTG)n Simple_repeat Simple_repeat 5 21 0 7 1206 261 0 0 0 chr17 81397207 81397236 -13875415 + (T)n Simple_repeat Simple_repeat 1 29 0 7 1206 837 117 0 0 chr17 81397891 81398019 -13874632 + (GAA)n Simple_repeat Simple_repeat 2 129 0 7 1206 945 83 0 48 chr17 81398708 81398897 -13873754 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1206 256 300 173 55 chr17 81398934 81399061 -13873590 - B4 SINE B4 -20 272 131 7 1206 810 280 9 18 chr17 81399147 81399365 -13873286 + ID_B1 SINE B4 8 223 -1 7 1206 673 275 31 6 chr17 81399455 81399616 -13873035 + B4 SINE B4 115 279 -13 7 1206 183 220 0 0 chr17 81399637 81399687 -13872964 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 1206 24 23 0 43 chr17 81399707 81399729 -13872922 + AT_rich Low_complexity Low_complexity 1 22 0 7 1206 1350 85 0 6 chr17 81399729 81399906 -13872745 - B2_Mm2 SINE B2 -19 176 1 7 1206 24 23 0 43 chr17 81399906 81399929 -13872722 + AT_rich Low_complexity Low_complexity 1 22 0 7 1206 188 0 74 0 chr17 81401274 81401301 -13871350 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 7 1206 622 223 43 0 chr17 81401301 81401431 -13871220 - B1F SINE Alu -8 141 6 7 1206 181 250 0 83 chr17 81401646 81401694 -13870957 + MER5B DNA MER1_type 5 48 -130 7 1206 189 346 18 63 chr17 81401858 81401969 -13870682 - MIRb SINE MIR -8 260 155 7 1206 847 244 32 37 chr17 81402235 81402452 -13870199 + ID_B1 SINE B4 3 218 -6 7 1206 954 120 7 0 chr17 81403418 81403560 -13869091 + B1_Mus2 SINE Alu 2 144 -3 7 1206 244 286 48 0 chr17 81404644 81404728 -13867923 + L2b LINE L2 3288 3375 0 7 1206 467 60 0 15 chr17 81405407 81405475 -13867176 + (TC)n Simple_repeat Simple_repeat 2 68 0 7 1206 383 269 18 18 chr17 81405528 81405638 -13867013 - B4A SINE B4 -23 269 160 7 1206 348 270 22 73 chr17 81405634 81405770 -13866881 - B3A SINE B2 -69 129 1 7 1206 285 253 0 138 chr17 81406489 81406576 -13866075 + RLTR33 LTR ERVK 452 526 -152 7 1206 657 254 29 0 chr17 81406940 81407078 -13865573 - ID_B1 SINE B4 -79 145 4 7 1206 423 0 0 0 chr17 81407104 81407151 -13865500 + (GA)n Simple_repeat Simple_repeat 2 48 0 7 1206 2591 77 3 0 chr17 81407211 81407537 -13865114 - ORR1A2 LTR MaLR 0 327 1 7 1206 399 89 0 0 chr17 81408262 81408318 -13864333 + (TTCG)n Simple_repeat Simple_repeat 2 57 0 7 1206 200 35 35 0 chr17 81408338 81408367 -13864284 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 7 1206 663 136 168 8 chr17 81408367 81408486 -13864165 - B1_Mus1 SINE Alu -10 138 1 7 1206 44 0 0 0 chr17 81409588 81409632 -13863019 + AT_rich Low_complexity Low_complexity 1 44 0 7 1206 270 0 0 0 chr17 81410081 81410111 -13862540 + (TGG)n Simple_repeat Simple_repeat 1 30 0 7 1206 474 18 0 0 chr17 81410208 81410263 -13862388 + (GA)n Simple_repeat Simple_repeat 2 56 0 7 1206 1661 171 95 35 chr17 81411114 81411483 -13861168 - RMER10A LTR ERVL -8 434 44 7 1206 207 318 121 16 chr17 81411830 81411951 -13860700 - L2a LINE L2 -14 3412 3221 7 1206 323 286 26 0 chr17 81412183 81412260 -13860391 - L2a LINE L2 -528 2891 2813 7 1206 2953 98 38 18 chr17 81413458 81413904 -13858747 - Lx2 LINE L1 0 6997 6543 7 1206 231 287 24 32 chr17 81414351 81414477 -13858174 + LTR16D1 LTR ERVL 525 649 -26 7 1206 284 303 112 15 chr17 81414546 81414680 -13857971 - ERVL-E-int LTR ERVL -711 5003 4857 7 1206 369 312 88 0 chr17 81415193 81415353 -13857298 - ERVL-E-int LTR ERVL -873 4794 4621 7 1206 380 20 20 0 chr17 81415461 81415510 -13857141 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 1206 792 157 52 0 chr17 81415715 81415849 -13856802 + B1_Mur4 SINE Alu 1 141 -9 7 1206 365 228 181 0 chr17 81416597 81416724 -13855927 - ERVL-E-int LTR ERVL -1527 4140 3991 7 1206 215 329 35 12 chr17 81417801 81417887 -13854764 + L2a LINE L2 1502 1589 -1830 7 1206 2026 216 192 58 chr17 81418245 81419050 -13853601 + RMER17B LTR ERVK 3 915 -43 7 1206 408 309 34 9 chr17 81419138 81419297 -13853354 - B4 SINE B4 -125 167 3 7 1206 223 286 0 0 chr17 81419363 81419412 -13853239 - PB1 SINE Alu -19 108 60 7 1206 340 360 28 50 chr17 81419441 81419622 -13853029 + Tigger9a DNA Tigger 548 724 -8 7 1206 227 313 141 56 chr17 81419639 81419781 -13852870 + L2a LINE L2 1597 1750 -1669 7 1206 405 311 50 109 chr17 81419993 81420092 -13852559 + L2a LINE L2 1893 1969 -1450 7 1206 838 279 14 5 chr17 81420092 81420301 -13852350 - B3 SINE B2 -5 211 1 7 1206 405 311 50 109 chr17 81420301 81420522 -13852129 + L2a LINE L2 1970 2194 -1225 7 1206 2499 181 67 16 chr17 81420555 81421050 -13851601 - RMER5 LTR ERV1 0 534 15 7 1206 368 330 109 11 chr17 81421058 81421242 -13851409 + L2a LINE L2 2259 2460 -959 7 1206 488 317 54 51 chr17 81421306 81421602 -13851049 + L2a LINE L2 2429 2725 -694 7 1206 250 355 0 0 chr17 81421957 81422033 -13850618 + L2a LINE L2 3088 3163 -263 7 1206 221 303 119 20 chr17 81422458 81422559 -13850092 + B4A SINE B4 44 154 -138 7 1206 615 138 8 24 chr17 81422696 81422822 -13849829 + CT-rich Low_complexity Low_complexity 1 124 0 7 1206 541 180 119 45 chr17 81422822 81422956 -13849695 + RMER1C Other Other 1198 1341 -1 7 1206 381 72 0 55 chr17 81423382 81423455 -13849196 + (CATA)n Simple_repeat Simple_repeat 1 69 0 8 1206 870 261 326 8 chr17 81424154 81424293 -13848358 + MTEb LTR MaLR 1 179 -200 8 1206 2196 69 78 10 chr17 81424293 81424599 -13848052 + ORR1A2 LTR MaLR 1 327 0 8 1206 870 283 25 21 chr17 81424599 81424780 -13847871 + MTEb LTR MaLR 180 366 -13 8 1206 376 313 94 25 chr17 81424825 81425028 -13847623 - ERVL-E-int LTR ERVL -3659 2008 1792 8 1206 422 345 128 5 chr17 81425113 81425308 -13847343 - MER20 DNA MER1_type 0 219 1 8 1206 258 159 79 0 chr17 81425599 81425662 -13846989 - ORR1B1 LTR MaLR -301 93 26 8 1206 181 315 61 61 chr17 81425762 81425860 -13846791 - L4 LINE RTE -615 1414 1317 8 1206 205 290 34 45 chr17 81427551 81427728 -13844923 + (CTCTG)n Simple_repeat Simple_repeat 3 177 0 8 1206 182 314 0 0 chr17 81428027 81428078 -13844573 + L2b LINE L2 3279 3329 -46 8 1206 1326 0 36 0 chr17 81430046 81430272 -13842379 + (CAGG)n Simple_repeat Simple_repeat 1 234 0 8 1206 440 256 43 56 chr17 81430502 81430663 -13841988 + MER5B DNA MER1_type 14 172 -6 8 1206 835 267 46 42 chr17 81430950 81431212 -13841439 + B4A SINE B4 30 292 0 8 1206 198 269 95 9 chr17 81431596 81431701 -13840950 + MIR3 SINE MIR 59 172 -36 8 1206 309 307 148 33 chr17 81432650 81432832 -13839819 - HAL1b LINE L1 -577 1432 1230 8 1206 201 154 0 0 chr17 81432994 81433033 -13839618 + (TCCA)n Simple_repeat Simple_repeat 3 41 0 8 1206 256 222 0 156 chr17 81433038 81433062 -13839589 - MT2B LTR ERVL -336 265 243 8 1206 738 113 21 0 chr17 81433062 81433204 -13839447 + (TCTA)n Simple_repeat Simple_repeat 3 147 0 8 1206 256 222 0 156 chr17 81433204 81433275 -13839376 - MT2B LTR ERVL -359 242 185 8 1206 363 143 48 0 chr17 81433213 81433276 -13839375 - PB1D9 SINE Alu -35 85 20 8 1206 714 235 82 6 chr17 81433278 81433449 -13839202 - B3 SINE B2 -32 184 1 8 1206 737 257 206 38 chr17 81433807 81434204 -13838447 - BLACKJACK DNA AcHobo -491 2453 1990 8 1206 201 39 0 0 chr17 81434230 81434256 -13838395 + (A)n Simple_repeat Simple_repeat 1 26 0 8 1206 655 279 15 30 chr17 81434280 81434483 -13838168 - BLACKJACK DNA AcHobo -1812 1132 933 8 1206 361 241 102 0 chr17 81434484 81434592 -13838059 - BLACKJACK DNA AcHobo -2120 824 706 8 1206 508 212 85 0 chr17 81435188 81435306 -13837345 + RSINE1 SINE B4 3 130 -35 8 1206 306 0 0 0 chr17 81435318 81435352 -13837299 + (CAATA)n Simple_repeat Simple_repeat 2 35 0 8 1206 1174 157 46 32 chr17 81435799 81436016 -13836635 - URR1A DNA MER1_type 0 226 7 8 1206 239 140 20 0 chr17 81436107 81436157 -13836494 + GA-rich Low_complexity Low_complexity 3 53 0 8 1206 306 125 0 0 chr17 81436759 81436807 -13835844 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 1206 187 230 66 26 chr17 81437606 81437682 -13834969 - L2 LINE L2 -348 3071 2993 8 1206 373 340 68 56 chr17 81437834 81438083 -13834568 - MLT1I LTR MaLR -158 253 2 8 1206 456 294 209 47 chr17 81438300 81438832 -13833819 - L2 LINE L2 -729 2690 2073 8 1206 185 0 0 39 chr17 81438986 81439012 -13833639 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 8 1206 206 294 148 70 chr17 81439069 81439197 -13833454 - L2 LINE L2 -1722 1697 1560 8 1206 450 0 0 0 chr17 81439279 81439329 -13833322 + (CAAAC)n Simple_repeat Simple_repeat 2 51 0 8 1206 528 261 0 0 chr17 81439374 81439489 -13833162 - PB1 SINE Alu -11 116 2 8 1206 556 222 93 38 chr17 81439712 81439895 -13832756 - L2 LINE L2 -2790 629 437 8 1206 836 186 68 63 chr17 81441391 81441598 -13831053 - B3 SINE B2 -7 209 2 8 1206 210 357 71 10 chr17 81441686 81441785 -13830866 - MIRc SINE MIR -113 155 51 8 1206 405 286 138 51 chr17 81444054 81444308 -13828343 - B4 SINE B4 -16 276 1 8 1206 447 269 141 29 chr17 81445305 81445581 -13827070 + MTE2a LTR MaLR 59 365 -14 8 1206 244 134 0 56 chr17 81445701 81445772 -13826879 + CT-rich Low_complexity Low_complexity 2 68 0 8 1206 1451 185 148 33 chr17 81446171 81446501 -13826150 + ORR1D1 LTR MaLR 3 370 -4 8 1206 310 236 0 65 chr17 81447374 81447451 -13825200 + ID4 SINE ID 3 74 -9 8 1206 236 301 24 0 chr17 81447452 81447535 -13825116 + GA-rich Low_complexity Low_complexity 6 90 0 8 1206 328 140 132 0 chr17 81447758 81447894 -13824757 + (CATG)n Simple_repeat Simple_repeat 3 156 0 8 1206 1202 61 0 0 chr17 81448223 81448370 -13824281 + B1_Mus2 SINE Alu 1 147 0 8 1206 267 130 0 0 chr17 81448370 81448424 -13824227 + (A)n Simple_repeat Simple_repeat 1 54 0 8 1206 786 97 194 0 chr17 81448669 81448793 -13823858 + B1_Mus1 SINE Alu 1 148 0 8 1206 185 0 40 0 chr17 81448800 81448825 -13823826 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 8 1206 1591 186 74 26 chr17 81449774 81450154 -13822497 - MTD LTR MaLR 0 419 22 8 1206 219 36 0 0 chr17 81450154 81450182 -13822469 + (CAAAA)n Simple_repeat Simple_repeat 4 31 0 8 1206 302 261 14 0 chr17 81450374 81450443 -13822208 - ID4 SINE ID -13 70 1 8 1206 202 163 0 44 chr17 81450892 81450937 -13821714 + GA-rich Low_complexity Low_complexity 2 44 0 8 1206 2712 112 71 17 chr17 81450991 81451456 -13821195 + RMER13B LTR ERVK 1 490 -418 8 1206 1123 188 35 20 chr17 81451450 81451705 -13820946 + RMER13B LTR ERVK 650 908 0 8 1206 1865 124 124 0 chr17 81452757 81453048 -13819603 + ORR1A2 LTR MaLR 1 327 0 8 1206 684 252 147 48 chr17 81455463 81455796 -13816855 + RLTR9A LTR ERVK 1 366 -2 8 1206 408 196 146 10 chr17 81457064 81457167 -13815484 - B3A SINE B2 -45 153 37 8 1206 488 221 149 7 chr17 81457201 81457342 -13815309 - RSINE1 SINE B4 -4 161 1 8 1206 239 379 0 0 chr17 81458504 81458607 -13814044 + MLT1A1 LTR MaLR 305 407 -1 8 1206 942 199 86 214 chr17 81458644 81458887 -13813764 - ORR1D1 LTR MaLR 0 374 160 8 1206 375 23 0 0 chr17 81458887 81458931 -13813720 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 1206 942 199 86 214 chr17 81458931 81459116 -13813535 - ORR1D1 LTR MaLR -215 159 1 8 1206 1153 82 88 0 chr17 81459322 81459492 -13813159 - B2_Mm2 SINE B2 -8 187 3 8 1206 331 252 94 28 chr17 81459654 81459866 -13812785 + L1MC5 LINE L1 7455 7680 -281 8 1206 243 320 15 39 chr17 81460177 81460307 -13812344 + MER5A DNA MER1_type 63 189 0 8 1206 980 132 38 54 chr17 81460435 81460619 -13812032 - B2_Mm2 SINE B2 -14 181 1 8 1206 2864 119 37 39 chr17 81460932 81461440 -13811211 - LTRIS4 LTR ERV1 0 507 1 8 1206 4593 95 7 122 chr17 81462286 81463140 -13809511 - RMER6A LTR ERVK 0 756 1 8 1206 384 278 0 0 chr17 81463257 81463354 -13809297 + B3A SINE B2 22 118 -80 8 1206 25 65 0 0 chr17 81463464 81463510 -13809141 + AT_rich Low_complexity Low_complexity 1 46 0 8 1206 357 266 0 28 chr17 81465101 81465192 -13807459 + B4 SINE B4 208 288 -4 8 1206 229 286 0 0 chr17 81465201 81465257 -13807394 + (CATA)n Simple_repeat Simple_repeat 1 56 0 8 1206 455 243 180 39 chr17 81465834 81466133 -13806518 + MTE2a LTR MaLR 59 379 0 8 1206 493 188 101 17 chr17 81466570 81466689 -13805962 + MTD LTR MaLR 6 134 -285 8 1206 333 272 0 98 chr17 81466742 81466844 -13805807 - RMER10B LTR ERVL -38 360 269 8 1206 808 215 137 55 chr17 81467126 81467397 -13805254 + MTD LTR MaLR 127 419 0 8 1206 427 280 85 20 chr17 81467503 81467656 -13804995 - ORR1E LTR MaLR -192 167 5 8 1206 187 207 0 94 chr17 81468004 81468068 -13804583 + L2b LINE L2 3316 3373 -2 8 1206 202 221 39 13 chr17 81468285 81468363 -13804288 + T-rich Low_complexity Low_complexity 3 82 0 8 1206 247 214 0 35 chr17 81468502 81468560 -13804091 + C-rich Low_complexity Low_complexity 4 59 0 8 1206 591 15 0 0 chr17 81469135 81469203 -13803448 + (TA)n Simple_repeat Simple_repeat 1 68 0 8 1206 338 305 147 19 chr17 81469622 81469779 -13802872 - B3A SINE B2 -10 188 12 8 1206 264 343 0 64 chr17 81469783 81469892 -13802759 - PB1 SINE Alu -25 102 1 8 1206 475 318 7 0 chr17 81470761 81470909 -13801742 - B1F1 SINE Alu 0 149 1 8 1206 545 76 13 0 chr17 81471011 81471090 -13801561 + (TTTC)n Simple_repeat Simple_repeat 1 80 0 8 1206 1057 122 0 0 chr17 81471090 81471237 -13801414 - B1_Mus1 SINE Alu -1 147 1 8 1206 222 37 0 0 chr17 81471284 81471311 -13801340 + (T)n Simple_repeat Simple_repeat 1 27 0 8 1206 1034 146 0 0 chr17 81471534 81471705 -13800946 + URR1A DNA MER1_type 55 225 -1 8 1206 1805 157 6 30 chr17 81472128 81472464 -13800187 + Lx LINE L1 6327 6654 0 8 1206 2372 184 17 79 chr17 81472624 81473207 -13799444 - RMER20B LTR ERVK 0 627 81 8 1206 348 279 42 36 chr17 81473224 81473391 -13799260 + RodERV21-int LTR ERV1 103 270 -4721 8 1206 1377 216 82 82 chr17 81473269 81473747 -13798904 + RMER17C-int LTR ERVK 82 559 -2679 8 1206 416 245 111 39 chr17 81473758 81473911 -13798740 - RMER17C LTR ERVK -29 381 218 8 1206 393 229 25 76 chr17 81473878 81473913 -13798738 - RMER17C LTR ERVK -298 112 84 8 1206 766 61 8 25 chr17 81473913 81474031 -13798620 + (GA)n Simple_repeat Simple_repeat 2 117 0 8 1206 393 229 25 76 chr17 81474031 81474113 -13798538 - RMER17C LTR ERVK -327 83 1 8 1206 521 174 0 0 chr17 81474113 81474199 -13798452 - RMER20B LTR ERVK -534 93 8 8 1206 343 245 30 30 chr17 81474549 81474650 -13798001 + PB1D10 SINE Alu 1 101 -16 8 1206 1206 97 0 0 chr17 81474666 81474915 -13797736 + (TG)n Simple_repeat Simple_repeat 1 249 0 8 1206 327 272 17 42 chr17 81475008 81475127 -13797524 - PB1D10 SINE Alu -1 116 1 8 1206 221 423 0 0 chr17 81475435 81475539 -13797112 - PB1D10 SINE Alu -12 105 2 8 1206 986 238 5 0 chr17 81475573 81475783 -13796868 + B3 SINE B2 6 216 0 8 1206 21 0 0 0 chr17 81475795 81475816 -13796835 + AT_rich Low_complexity Low_complexity 1 21 0 8 1206 216 0 0 0 chr17 81475949 81475973 -13796678 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 8 1206 504 289 91 0 chr17 81476259 81476456 -13796195 - L1MB2 LINE L1 -111 6060 5846 8 1206 1146 167 13 26 chr17 81476735 81476822 -13795829 - URR1A DNA MER1_type 0 226 141 8 1206 4522 29 0 9 chr17 81476822 81477348 -13795303 - L1Md_T LINE L1 -1 6581 6061 8 1206 1146 167 13 26 chr17 81477348 81477488 -13795163 - URR1A DNA MER1_type -86 140 2 8 1206 439 208 0 0 chr17 81477704 81477781 -13794870 + B1_Mur1 SINE Alu 66 142 -7 8 1206 340 200 0 12 chr17 81477952 81478038 -13794613 - RMER17C LTR ERVK -135 275 191 8 1206 1195 74 0 0 chr17 81478821 81478969 -13793682 + B1_Mus1 SINE Alu 1 148 0 8 1206 503 186 10 0 chr17 81479030 81479123 -13793528 - URR1B DNA MER1_type 0 225 132 9 1206 657 244 15 66 chr17 81479123 81479320 -13793331 - RLTR9A LTR ERVK 0 368 182 9 1206 245 292 54 33 chr17 81479791 81479883 -13792768 - MIRb SINE MIR -69 199 106 9 1206 1045 210 4 35 chr17 81480331 81480563 -13792088 + URR1A DNA MER1_type 2 226 0 9 1206 421 279 29 14 chr17 81480799 81480937 -13791714 - MER58A DNA MER1_type -32 192 53 9 1206 235 297 121 30 chr17 81481161 81481293 -13791358 + MIR SINE MIR 119 262 0 9 1206 394 298 50 0 chr17 81481443 81481571 -13791080 - B1F2 SINE Alu -1 148 17 9 1206 396 0 0 0 chr17 81481571 81481615 -13791036 + (CA)n Simple_repeat Simple_repeat 2 45 0 9 1206 394 298 50 0 chr17 81481615 81481627 -13791024 - B1F2 SINE Alu -133 16 2 9 1206 315 0 0 0 chr17 81481763 81481798 -13790853 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 1206 2520 202 27 67 chr17 81481840 81482299 -13790352 - MERVL-int LTR ERVL -4914 571 118 9 1206 540 0 0 0 chr17 81482299 81482359 -13790292 + (GA)n Simple_repeat Simple_repeat 1 60 0 9 1206 2520 202 27 67 chr17 81482359 81482494 -13790157 - MERVL-int LTR ERVL -5368 117 2 9 1206 3855 101 35 7 chr17 81482498 81483075 -13789576 - MT2B LTR ERVL -8 593 1 9 1206 180 0 0 0 chr17 81483976 81483996 -13788655 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 9 1206 610 200 9 0 chr17 81483996 81484111 -13788540 - B1_Mus2 SINE Alu -13 134 19 9 1206 21 0 0 0 chr17 81484157 81484178 -13788473 + AT_rich Low_complexity Low_complexity 1 21 0 9 1206 24 0 0 0 chr17 81484975 81484999 -13787652 + AT_rich Low_complexity Low_complexity 1 24 0 9 1206 209 318 68 0 chr17 81485072 81485160 -13787491 + L3b LINE CR1 296 389 -93 9 1206 864 245 29 59 chr17 81485538 81485811 -13786840 + MTE2a LTR MaLR 108 372 -7 9 1206 234 150 0 0 chr17 81486532 81486572 -13786079 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 1206 333 219 112 19 chr17 81487369 81487476 -13785175 - L1MC LINE L1 -2143 5739 5623 9 1206 690 245 16 158 chr17 81487500 81487747 -13784904 + B3 SINE B2 1 212 -4 9 1206 459 0 0 0 chr17 81488125 81488176 -13784475 + (TC)n Simple_repeat Simple_repeat 2 52 0 9 1206 465 225 8 77 chr17 81488182 81488312 -13784339 - RSINE1 SINE B4 -29 136 16 9 1206 293 68 23 0 chr17 81489302 81489346 -13783305 + (GGGAGA)n Simple_repeat Simple_repeat 1 45 0 9 1206 1140 89 0 0 chr17 81489430 81489610 -13783041 + (CA)n Simple_repeat Simple_repeat 1 180 0 9 1206 327 304 145 17 chr17 81490227 81490468 -13782183 - MLT1A0 LTR MaLR -38 327 56 9 1206 209 296 0 0 chr17 81490622 81490676 -13781975 + A-rich Low_complexity Low_complexity 5 58 0 9 1206 478 43 29 0 chr17 81490731 81490800 -13781851 + (CA)n Simple_repeat Simple_repeat 1 71 0 9 1206 506 43 14 0 chr17 81490842 81490911 -13781740 + (TG)n Simple_repeat Simple_repeat 1 70 0 9 1206 737 242 63 0 chr17 81490952 81491142 -13781509 - L1M3 LINE L1 -608 5581 5380 9 1206 378 296 174 0 chr17 81491153 81491311 -13781340 - L1M3 LINE L1 -1154 4992 4805 9 1206 474 61 0 0 chr17 81491311 81491377 -13781274 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 9 1206 378 296 174 0 chr17 81491377 81491390 -13781261 - L1M3 LINE L1 -1342 4804 4792 9 1206 595 277 164 50 chr17 81491380 81491906 -13780745 - L1M3 LINE L1 -1646 4494 3894 9 1206 293 365 23 12 chr17 81492284 81492456 -13780195 - MLT1D LTR MaLR -7 498 325 9 1206 234 0 0 0 chr17 81493068 81493094 -13779557 + (TG)n Simple_repeat Simple_repeat 1 26 0 9 1206 336 24 0 0 chr17 81493094 81493134 -13779517 + (GA)n Simple_repeat Simple_repeat 1 41 0 9 1206 364 296 42 42 chr17 81493432 81493552 -13779099 + ID_B1 SINE B4 95 214 -10 9 1206 213 65 0 0 chr17 81493552 81493583 -13779068 + (CACAA)n Simple_repeat Simple_repeat 4 34 0 9 1206 1171 63 0 0 chr17 81494510 81494652 -13777999 - B1_Mus1 SINE Alu -2 146 5 9 1206 302 288 0 59 chr17 81495154 81495239 -13777412 - ID4_ SINE ID -2 81 2 9 1206 421 294 8 8 chr17 81495544 81495655 -13776996 + B1_Mus2 SINE Alu 23 134 -13 9 1206 468 0 0 0 chr17 81495655 81495707 -13776944 + (CAAAC)n Simple_repeat Simple_repeat 1 52 0 9 1206 216 323 20 10 chr17 81496766 81496866 -13775785 - L2 LINE L2 -704 2715 2615 9 1206 687 176 96 40 chr17 81497014 81497191 -13775460 + B2_Mm2 SINE B2 1 187 -8 9 1206 308 64 0 21 chr17 81497460 81497508 -13775143 + (TTCC)n Simple_repeat Simple_repeat 3 49 0 9 1206 850 207 50 39 chr17 81497874 81498055 -13774596 + B3A SINE B2 1 183 -15 9 1206 222 356 19 99 chr17 81498350 81498512 -13774139 - B4A SINE B4 -141 151 3 9 1206 548 237 15 7 chr17 81498606 81498742 -13773909 + L1M1 LINE L1 5658 5794 -506 9 1206 294 29 0 0 chr17 81498742 81498777 -13773874 + (TATG)n Simple_repeat Simple_repeat 2 36 0 9 1206 736 11 21 0 chr17 81498777 81498870 -13773781 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 9 1206 1265 34 17 6 chr17 81498892 81499068 -13773583 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 9 1206 381 58 0 0 chr17 81499092 81499144 -13773507 + (TCTG)n Simple_repeat Simple_repeat 3 54 0 9 1206 1622 229 113 13 chr17 81499151 81499612 -13773039 + L1MA6 LINE L1 5782 6288 -12 9 1206 541 120 34 0 chr17 81501422 81501539 -13771112 + (TCTG)n Simple_repeat Simple_repeat 4 124 0 1 1206 540 30 0 0 chr17 81503244 81503310 -13769341 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 2 1206 26 50 0 0 chr17 81504023 81504063 -13768588 + AT_rich Low_complexity Low_complexity 1 40 0 3 1206 862 153 6 6 chr17 81504193 81504371 -13768280 + (TA)n Simple_repeat Simple_repeat 1 178 0 4 1206 964 143 0 0 chr17 81504372 81504512 -13768139 - B1_Mus2 SINE Alu -5 142 3 5 1206 570 289 10 73 chr17 81504534 81504559 -13768092 - B3A SINE B2 -6 192 169 6 1206 207 0 0 0 chr17 81504559 81504582 -13768069 + (CTAG)n Simple_repeat Simple_repeat 2 24 0 7 1206 570 289 10 73 chr17 81504582 81504761 -13767890 - B3A SINE B2 -30 168 1 6 1206 241 318 47 0 chr17 81504953 81505038 -13767613 - MER103 DNA DNA -63 103 15 8 1206 315 0 0 0 chr17 81505079 81505114 -13767537 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 9 1206 1204 40 0 0 chr17 81505486 81505634 -13767017 - L1Md_A LINE L1 0 6582 6435 1 1206 5481 33 0 0 chr17 81505634 81506268 -13766383 + L1Md_A LINE L1 5811 6444 -138 1 1206 573 240 137 25 chr17 81506822 81507019 -13765632 + ORR1D2 LTR MaLR 1 219 -155 1 1206 688 190 94 6 chr17 81507313 81507472 -13765179 + ORR1D2 LTR MaLR 198 370 0 1 1206 4084 50 6 2 chr17 81508058 81508563 -13764088 - L1_Mus4 LINE L1 -6 6630 6124 1 1206 2625 71 51 0 chr17 81508563 81508914 -13763737 + L1_Mus4 LINE L1 5667 6035 -601 1 1206 392 268 87 24 chr17 81510046 81510172 -13762479 + B3 SINE B2 58 191 -25 1 1206 369 0 0 0 chr17 81510771 81510812 -13761839 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 1206 1426 136 0 0 chr17 81511233 81511453 -13761198 + URR1A DNA MER1_type 7 226 0 1 1206 472 229 60 65 chr17 81511277 81511478 -13761173 - CYRA11_Mm Unknown Y-chromosome -272 345 146 1 1206 1113 105 0 0 chr17 81511672 81511815 -13760836 + B1_Mus1 SINE Alu 1 143 -5 1 1206 2147 141 88 0 chr17 81512181 81512543 -13760108 - ORR1B1 LTR MaLR 0 394 1 1 1206 996 275 135 0 chr17 81513063 81513412 -13759239 + Lx5 LINE L1 5954 6349 -701 1 1206 800 304 121 40 chr17 81513423 81513939 -13758712 + Lx5 LINE L1 6479 7250 -210 1 1206 606 74 352 0 chr17 81514807 81514907 -13757744 + B1_Mus1 SINE Alu 2 139 -9 2 1206 351 0 0 0 chr17 81514907 81514946 -13757705 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1206 7545 72 20 0 chr17 81515083 81516115 -13756536 - L1_Mus2 LINE L1 -1 6565 5513 2 1206 248 316 0 0 chr17 81518547 81518623 -13754028 - B3A SINE B2 -119 79 4 2 1206 946 181 51 56 chr17 81518803 81519019 -13753632 + B3 SINE B2 2 216 0 2 1206 892 297 62 0 chr17 81519973 81520229 -13752422 - B4 SINE B4 -18 274 3 2 1206 3999 50 2 0 chr17 81520326 81520806 -13751845 + L1Md_F2 LINE L1 6101 6581 -1 2 1206 977 261 119 14 chr17 81521321 81521690 -13750961 - L1MC LINE L1 -591 5742 5335 2 1206 441 0 0 0 chr17 81522212 81522261 -13750390 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1206 231 246 62 0 chr17 81522269 81522334 -13750317 + PB1D10 SINE Alu 44 112 -5 2 1206 273 174 0 0 chr17 81522289 81522335 -13750316 + ID_B1 SINE B4 175 220 -4 3 1206 296 347 44 63 chr17 81522467 81522673 -13749978 - MLT1J LTR MaLR -7 505 304 3 1206 250 308 11 11 chr17 81523316 81523408 -13749243 + MER103 DNA DNA 21 112 -54 3 1206 459 0 0 0 chr17 81523597 81523648 -13749003 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1206 862 265 99 11 chr17 81523852 81524115 -13748536 + B4 SINE B4 2 287 -5 3 1206 283 195 45 125 chr17 81524267 81524355 -13748296 - ID4_ SINE ID -1 82 2 3 1206 3750 220 66 10 chr17 81525387 81525680 -13746971 - Lx7 LINE L1 0 7696 7388 3 1206 495 0 0 0 chr17 81525680 81525735 -13746916 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1206 477 0 0 0 chr17 81525735 81525787 -13746864 + (GA)n Simple_repeat Simple_repeat 2 54 0 3 1206 867 101 7 20 chr17 81525791 81525943 -13746708 + (GAA)n Simple_repeat Simple_repeat 2 151 0 3 1206 3750 220 66 10 chr17 81525943 81526506 -13746145 - Lx7 LINE L1 -309 7387 6792 3 150 10846 152 40 79 chr17 81526507 81527095 -13745556 - L1_Mur3 LINE L1 -2287 3593 2992 4 1207 460 0 33 0 chr17 81527095 81527155 -13745496 + (TTTA)n Simple_repeat Simple_repeat 4 65 0 4 1207 10846 152 40 79 chr17 81527155 81527772 -13744879 - L1_Mur3 LINE L1 -2889 2991 2372 4 1207 378 0 0 0 chr17 81527772 81527814 -13744837 + (TC)n Simple_repeat Simple_repeat 1 42 0 4 1207 677 181 0 15 chr17 81527816 81527951 -13744700 - B2_Mm2 SINE B2 -15 180 48 4 1207 10846 164 49 60 chr17 81527951 81529994 -13742657 - L1_Mur3 LINE L1 -3509 2369 277 4 1207 3034 23 3 3 chr17 81530017 81530363 -13742288 + ORR1A0 LTR MaLR 1 346 0 4 1207 247 196 0 38 chr17 81530543 81530596 -13742055 - MTE2a LTR MaLR -32 347 297 4 1207 1117 250 46 32 chr17 81530622 81530994 -13741657 + Lx8 LINE L1 7092 7468 -5 4 1207 476 105 13 0 chr17 81531381 81531457 -13741194 + (GA)n Simple_repeat Simple_repeat 2 78 0 4 1207 24 32 0 0 chr17 81531734 81531765 -13740886 + AT_rich Low_complexity Low_complexity 1 31 0 4 1207 181 322 93 13 chr17 81532249 81532400 -13740251 + MIRb SINE MIR 17 179 -89 4 1207 237 132 0 0 chr17 81533495 81533533 -13739118 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 5 1207 290 305 37 0 chr17 81533576 81533658 -13738993 - B1F SINE Alu -59 90 6 5 1207 489 232 0 0 chr17 81533753 81533895 -13738756 + (TG)n Simple_repeat Simple_repeat 1 142 0 5 1207 303 28 0 0 chr17 81534497 81534533 -13738118 + (TC)n Simple_repeat Simple_repeat 1 36 0 5 1207 366 23 0 0 chr17 81534534 81534577 -13738074 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1207 603 289 137 90 chr17 81534631 81534774 -13737877 - B4A SINE B4 0 292 173 5 1207 799 78 207 0 chr17 81534774 81534890 -13737761 + B1_Mus1 SINE Alu 1 140 -8 5 1207 207 0 0 0 chr17 81534890 81534913 -13737738 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 1207 603 289 137 90 chr17 81534913 81535046 -13737605 - B4A SINE B4 -120 172 3 5 1207 316 55 35 35 chr17 81535300 81535357 -13737294 - HAL1-3A_ME LINE L1 -824 2034 1978 5 1207 227 258 15 0 chr17 81535359 81535425 -13737226 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 1207 447 19 0 0 chr17 81535879 81535931 -13736720 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1207 565 168 78 17 chr17 81535931 81536046 -13736605 - RSINE1 SINE B4 -41 124 3 6 1207 484 102 0 84 chr17 81536678 81536785 -13735866 - L1Md_F2 LINE L1 0 6582 6485 6 1207 216 290 32 16 chr17 81538188 81538251 -13734400 + MER5A DNA MER1_type 121 184 -5 6 1207 438 101 0 0 chr17 81538422 81538491 -13734160 + (TATG)n Simple_repeat Simple_repeat 4 72 0 6 1207 617 281 22 0 chr17 81538491 81538630 -13734021 - RSINE1 SINE B4 -21 144 3 6 1207 401 295 71 14 chr17 81539690 81539904 -13732747 + L1MB5 LINE L1 5697 5920 -259 6 1207 201 74 0 0 chr17 81541047 81541074 -13731577 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 6 1207 556 224 59 27 chr17 81542125 81542330 -13730321 - RLTR18 LTR ERVK -264 248 25 6 1207 625 251 62 6 chr17 81543202 81543378 -13729273 - B3A SINE B2 -10 188 3 6 1207 594 41 0 0 chr17 81543407 81543480 -13729171 + (TTTC)n Simple_repeat Simple_repeat 3 75 0 7 1207 1235 77 59 0 chr17 81543482 81543651 -13729000 - B2_Mm2 SINE B2 -14 181 3 7 1207 4209 66 17 28 chr17 81543654 81544228 -13728423 + L1Md_F2 LINE L1 6013 6580 -2 7 1207 204 125 0 0 chr17 81544711 81544743 -13727908 + (CCA)n Simple_repeat Simple_repeat 1 32 0 7 1207 700 316 101 17 chr17 81544840 81545127 -13727524 - ORR1E LTR MaLR -6 353 43 7 1207 1529 200 13 16 chr17 81546117 81546427 -13726224 - Lx4B LINE L1 -8 7050 6742 7 1207 4345 92 22 147 chr17 81546427 81547327 -13725324 + RLTR13C2 LTR ERVK 1 788 -20 7 1207 3787 147 5 48 chr17 81547342 81548006 -13724645 - Lx4B LINE L1 -307 6751 6117 7 1207 5404 135 49 9 chr17 81548165 81549099 -13723552 - L1_Mur2 LINE L1 -1389 4488 3517 7 1207 639 205 8 0 chr17 81549100 81549227 -13723424 - RLTR15 LTR ERVK -231 128 1 7 1207 1834 208 7 20 chr17 81549227 81549665 -13722986 - L1_Mur2 LINE L1 -5773 1313 882 7 1207 257 259 0 0 chr17 81550491 81550545 -13722106 - MIR SINE MIR -58 150 97 7 1207 636 248 22 104 chr17 81552992 81553222 -13719429 - B4A SINE B4 0 292 82 8 1207 991 119 11 0 chr17 81553232 81553408 -13719243 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 8 1207 534 118 0 0 chr17 81553408 81553510 -13719141 + (TATG)n Simple_repeat Simple_repeat 2 103 0 8 1207 2635 206 28 16 chr17 81553512 81554019 -13718632 - Lx5 LINE L1 -15 7035 6523 8 1207 235 221 21 97 chr17 81554131 81554276 -13718375 - Lx9 LINE L1 -1 7643 7510 8 1207 350 261 59 34 chr17 81554279 81554398 -13718253 - Lx9 LINE L1 -375 7269 7148 8 1207 3335 28 5 18 chr17 81554977 81555378 -13717273 - MTA_Mm LTR MaLR 0 396 1 8 1207 2055 114 12 18 chr17 81555754 81556093 -13716558 - IAPLTR1a_Mm LTR ERVK 0 337 1 8 1207 56309 28 9 2 chr17 81556095 81562520 -13710131 - IAPEz-int LTR ERVK -2 6479 8 8 1207 2055 114 12 18 chr17 81562520 81562859 -13709792 - IAPLTR1a_Mm LTR ERVK 0 337 1 8 1207 2819 153 35 21 chr17 81563822 81564342 -13708309 + RLTR17 LTR ERVK 166 692 0 8 1207 8886 184 63 60 chr17 81564342 81566829 -13705822 + RMER3D-int LTR ERVK 1 2842 0 8 1207 1806 175 68 3 chr17 81566830 81567168 -13705483 + RLTR17 LTR ERVK 2 361 -331 8 1207 420 111 0 0 chr17 81567171 81567234 -13705417 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 8 1207 360 0 0 0 chr17 81567734 81567774 -13704877 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 1207 396 0 0 0 chr17 81567774 81567817 -13704834 + (GA)n Simple_repeat Simple_repeat 1 44 0 9 1207 316 257 59 0 chr17 81567827 81567928 -13704723 + MIRb SINE MIR 38 144 -124 9 1207 1111 186 23 0 chr17 81567956 81568171 -13704480 + URR1B DNA MER1_type 6 225 0 9 1207 948 232 186 97 chr17 81569772 81570197 -13702454 + MT2A LTR ERVL 1 463 -70 9 1207 599 0 14 0 chr17 81570197 81570268 -13702383 + (TC)n Simple_repeat Simple_repeat 1 72 0 9 1207 193 257 93 13 chr17 81570706 81570781 -13701870 - MIRc SINE MIR -110 158 78 9 1207 1585 179 38 65 chr17 81570899 81571269 -13701382 - RLTR41 LTR ERV1 0 446 87 9 1207 793 221 143 9 chr17 81572724 81572948 -13699703 - L1MB2 LINE L1 -303 5868 5615 9 1207 1415 201 104 23 chr17 81572949 81573295 -13699356 - ORR1D1 LTR MaLR 0 374 1 9 1207 368 226 0 8 chr17 81573311 81573436 -13699215 + (TG)n Simple_repeat Simple_repeat 1 124 0 9 1207 453 317 148 31 chr17 81573436 81573693 -13698958 - MER21B LTR ERV1 -65 798 512 1 1207 641 224 495 4 chr17 81576785 81577019 -13695632 - ORR1D2 LTR MaLR 0 370 22 1 1207 426 20 0 0 chr17 81577230 81577281 -13695370 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 1207 315 287 62 21 chr17 81577433 81577529 -13695122 + RMER10A LTR ERVL 315 414 -28 1 1207 242 254 0 33 chr17 81578461 81578522 -13694129 + CT-rich Low_complexity Low_complexity 6 64 0 1 1207 396 289 155 0 chr17 81578727 81578758 -13693893 - RSINE1 SINE B4 -1 164 126 1 1207 360 0 0 0 chr17 81578758 81578798 -13693853 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1207 396 289 155 0 chr17 81578798 81578908 -13693743 - RSINE1 SINE B4 -40 125 2 1 1207 1780 233 13 38 chr17 81579160 81579638 -13693013 + RMER19C LTR ERVK 146 611 0 1 1207 589 173 0 0 chr17 81580874 81580978 -13691673 - B3 SINE B2 -86 130 27 1 1207 2362 102 48 0 chr17 81580983 81581337 -13691314 - L1_Mus3 LINE L1 0 6638 6268 1 1207 1469 124 0 0 chr17 81581337 81581547 -13691104 + L1_Mm LINE L1 4745 4954 -929 1 1207 273 396 0 0 chr17 81582130 81582231 -13690420 + PB1D10 SINE Alu 3 103 -14 1 1207 834 153 0 0 chr17 81583162 81583306 -13689345 + (TG)n Simple_repeat Simple_repeat 2 145 0 1 1207 446 184 23 0 chr17 81583539 81583645 -13689006 - PB1D7 SINE Alu -5 115 8 1 1207 1869 184 90 3 chr17 81584587 81584963 -13687688 - MTD LTR MaLR -10 409 1 1 1207 450 326 101 89 chr17 81585086 81585524 -13687127 - MLT1F2 LTR MaLR 0 560 118 1 1207 1150 169 45 97 chr17 81586432 81586833 -13685818 - Lx7 LINE L1 -4 7692 7313 1 1207 474 260 0 6 chr17 81586848 81587114 -13685537 + (CCA)n Simple_repeat Simple_repeat 1 264 0 1 1207 676 221 14 7 chr17 81587120 81587266 -13685385 - Lx7 LINE L1 -366 7330 7184 1 1207 409 296 65 22 chr17 81587508 81587752 -13684899 - L1_Mur1 LINE L1 -4084 1802 1539 1 1207 243 0 0 0 chr17 81588054 81588081 -13684570 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1207 2244 165 98 40 chr17 81588538 81588619 -13684032 - RLTR11A LTR ERVK 0 528 450 1 1207 915 18 0 0 chr17 81588619 81588728 -13683923 + (CA)n Simple_repeat Simple_repeat 1 109 0 1 1207 2244 165 98 40 chr17 81588728 81589145 -13683506 - RLTR11A LTR ERVK -79 449 1 1 1207 1059 145 105 0 chr17 81589637 81589837 -13682814 + URR1A DNA MER1_type 6 226 0 1 1207 317 312 82 31 chr17 81590334 81590493 -13682158 + MER5B DNA MER1_type 4 170 -8 1 1207 858 213 119 0 chr17 81590611 81590813 -13681838 - URR1A DNA MER1_type 0 226 1 1 1207 1196 41 7 0 chr17 81591354 81591499 -13681152 - B1_Mus2 SINE Alu 0 147 2 1 1207 374 57 19 0 chr17 81592563 81592616 -13680035 + (CAA)n Simple_repeat Simple_repeat 3 56 0 1 1207 1801 60 83 4 chr17 81592651 81592904 -13679747 + L1_Mus4 LINE L1 6360 6632 -4 1 1207 236 388 0 0 chr17 81593758 81593879 -13678772 - L1MD1 LINE L1 -35 6207 6087 1 1207 477 256 202 29 chr17 81593880 81594335 -13678316 - L1MDa LINE L1 -1356 5181 4648 1 1207 576 42 0 0 chr17 81594356 81594427 -13678224 + (TTCC)n Simple_repeat Simple_repeat 3 73 0 1 1207 962 162 6 0 chr17 81594427 81594606 -13678045 + CT-rich Low_complexity Low_complexity 1 180 0 1 1207 230 335 44 6 chr17 81594606 81594765 -13677886 - L1MDa LINE L1 -1909 4628 4464 1 1207 216 0 0 0 chr17 81595011 81595035 -13677616 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1 1207 396 331 46 75 chr17 81595052 81595225 -13677426 - ID_B1 SINE B4 -55 169 2 1 1207 1251 269 169 34 chr17 81595225 81596145 -13676506 - L1MDa LINE L1 -2535 4002 2959 1 1207 357 313 214 35 chr17 81596356 81596846 -13675805 - L1MDa LINE L1 -5190 1443 866 1 1207 933 327 67 58 chr17 81596894 81597607 -13675044 - L1MDa LINE L1 -5894 739 20 1 1207 196 348 33 11 chr17 81597633 81597723 -13674928 - L2a LINE L2 -5 3421 3330 1 1207 1198 107 50 11 chr17 81597744 81597923 -13674728 + B2_Mm2 SINE B2 2 187 -8 1 1207 255 284 88 44 chr17 81598044 81598158 -13674493 - PB1D9 SINE Alu -1 119 1 1 1207 475 262 0 37 chr17 81598057 81598164 -13674487 - B4 SINE B4 -110 182 80 1 1207 431 236 62 47 chr17 81598196 81598325 -13674326 - RSINE1 SINE B4 -29 136 6 1 1207 445 191 22 0 chr17 81598332 81598421 -13674230 - B4 SINE B4 -201 91 1 1 1207 243 0 0 0 chr17 81598644 81598671 -13673980 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 1 1207 898 226 39 19 chr17 81599829 81600037 -13672614 + B3 SINE B2 5 216 0 1 1207 336 332 104 57 chr17 81600818 81601258 -13671393 - HAL1 LINE L1 -1430 1077 617 1 1207 302 335 45 83 chr17 81601396 81601686 -13670965 + ORR1E LTR MaLR 47 325 -34 1 1207 33 0 0 0 chr17 81601875 81601908 -13670743 + AT_rich Low_complexity Low_complexity 1 33 0 1 1207 3101 61 0 18 chr17 81601990 81602388 -13670263 + L1_Mus1 LINE L1 6177 6567 0 1 1207 288 0 0 0 chr17 81602908 81602940 -13669711 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 1207 1169 54 6 0 chr17 81602940 81603105 -13669546 + (CA)n Simple_repeat Simple_repeat 1 167 0 1 1207 7357 138 41 2 chr17 81603866 81605083 -13667568 + L1_Mur2 LINE L1 3993 5257 -620 1 1207 484 198 60 0 chr17 81605082 81605207 -13667444 - L1PB4 LINE L1 -314 5842 5706 1 1207 3681 114 20 14 chr17 81605699 81606260 -13666391 - LTRIS2 LTR ERV1 0 564 1 1 1207 582 15 0 0 chr17 81606815 81606882 -13665769 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 1207 1710 240 36 11 chr17 81607721 81608164 -13664487 + Lx9 LINE L1 7064 7517 -127 1 1207 306 50 0 0 chr17 81608166 81608206 -13664445 + (TATATG)n Simple_repeat Simple_repeat 5 44 0 1 1207 481 138 150 14 chr17 81608227 81608367 -13664284 + Lx9 LINE L1 7477 7635 -9 1 1207 378 0 0 0 chr17 81609119 81609161 -13663490 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1207 621 267 14 0 chr17 81609161 81609307 -13663344 - B3A SINE B2 -50 148 1 1 1207 231 408 15 39 chr17 81610042 81610172 -13662479 - LTR16E2 LTR ERVL -389 179 53 1 1207 817 319 158 18 chr17 81611311 81611755 -13660896 + MLT1H LTR MaLR 19 524 -25 1 1207 812 339 28 21 chr17 81611908 81612197 -13660454 + RMER15 LTR ERVL 273 563 -12 1 1207 234 323 47 24 chr17 81612976 81613103 -13659548 + L1ME3A LINE L1 5633 5762 -411 1 1207 294 286 59 15 chr17 81613371 81613506 -13659145 + L1ME3A LINE L1 5997 6137 -36 1 1207 320 176 15 0 chr17 81614647 81614715 -13657936 + CT-rich Low_complexity Low_complexity 2 70 0 1 1207 1094 123 0 11 chr17 81614720 81614901 -13657750 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1 1207 860 307 68 34 chr17 81614912 81615503 -13657148 + Lx8 LINE L1 5392 6032 -1441 1 1207 234 0 0 0 chr17 81615767 81615793 -13656858 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 1 1207 370 325 77 49 chr17 81616182 81616428 -13656223 - L2 LINE L2 -518 2901 2649 1 1207 1168 68 0 0 chr17 81616824 81616971 -13655680 + B1_Mus2 SINE Alu 1 147 0 1 1207 300 308 163 15 chr17 81617547 81617682 -13654969 - L1MEd LINE L1 -5632 487 333 1 1207 432 0 0 0 chr17 81617958 81618006 -13654645 + (TC)n Simple_repeat Simple_repeat 2 49 0 1 1207 390 291 45 38 chr17 81618564 81618696 -13653955 - LTR16B LTR ERVL -45 418 286 1 1207 736 192 101 69 chr17 81618966 81619114 -13653537 - URR1B DNA MER1_type 0 225 90 1 1207 1169 57 0 0 chr17 81619114 81619255 -13653396 + B1_Mus2 SINE Alu 2 142 -5 1 1207 736 192 101 69 chr17 81619255 81619324 -13653327 - URR1B DNA MER1_type -136 89 1 1 1207 22 70 0 0 chr17 81621321 81621364 -13651287 + AT_rich Low_complexity Low_complexity 1 43 0 1 1207 601 337 51 62 chr17 81621378 81621925 -13650726 + L1MC4 LINE L1 1711 2251 -3964 1 1207 4096 64 13 18 chr17 81621926 81622481 -13650170 + L1Md_F2 LINE L1 6031 6582 0 1 1207 420 356 145 3 chr17 81622553 81622835 -13649816 + L1MC4 LINE L1 3746 4067 -2147 1 1207 577 276 90 27 chr17 81622959 81623327 -13649324 + L1MA6 LINE L1 5910 6300 0 1 1207 758 277 12 12 chr17 81623421 81623589 -13649062 + B3 SINE B2 1 168 -48 1 1207 864 216 21 29 chr17 81623666 81623905 -13648746 + Lx5 LINE L1 6764 7000 -50 1 1207 4509 96 33 25 chr17 81624912 81625587 -13647064 - Lx2 LINE L1 -15 6982 6303 1 1207 181 415 0 0 chr17 81627083 81627148 -13645503 - L2b LINE L2 -1 3374 3310 1 1207 487 330 44 6 chr17 81627218 81627398 -13645253 - MER58A DNA MER1_type -3 221 35 1 1207 363 23 0 0 chr17 81627585 81627629 -13645022 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1207 327 78 0 0 chr17 81627629 81627679 -13644972 + (CAGAGA)n Simple_repeat Simple_repeat 3 53 0 1 1207 303 265 53 120 chr17 81627913 81628046 -13644605 + PB1 SINE Alu 2 125 -2 1 1207 281 164 40 24 chr17 81628381 81628396 -13644255 + (TCTA)n Simple_repeat Simple_repeat 3 18 0 1 1207 347 0 23 0 chr17 81628396 81628439 -13644212 + (TATG)n Simple_repeat Simple_repeat 1 44 0 1 1207 281 164 40 24 chr17 81628439 81628548 -13644103 + (TCTA)n Simple_repeat Simple_repeat 1 110 0 1 1207 931 315 7 88 chr17 81628641 81628947 -13643704 - B4 SINE B4 -6 286 6 1 1207 1038 224 56 35 chr17 81629030 81629261 -13643390 - B4A SINE B4 -18 274 39 1 1207 1601 48 0 0 chr17 81629482 81629689 -13642962 + L1_Mus1 LINE L1 5750 5956 -611 1 1207 767 118 13 0 chr17 81630171 81630323 -13642328 + (TCTA)n Simple_repeat Simple_repeat 1 154 0 1 1207 2158 186 26 70 chr17 81630329 81630785 -13641866 - RMER4A LTR ERVK 0 466 31 1 1207 1101 222 4 13 chr17 81630822 81631050 -13641601 - Lx5 LINE L1 -3 7047 6822 1 1207 2999 95 25 51 chr17 81631052 81631540 -13641111 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1207 4444 32 2 0 chr17 81631550 81632106 -13640545 + IAPEz-int LTR ERVK 35 591 -5890 1 1207 933 50 0 0 chr17 81632138 81632257 -13640394 + IAPEz-int LTR ERVK 1359 1477 -5004 1 1207 1746 103 8 0 chr17 81632252 81632504 -13640147 + IAPEz-int LTR ERVK 2244 2497 -5183 1 1207 873 81 24 0 chr17 81632501 81632624 -13640027 + IAPEz-int LTR ERVK 4785 4910 -2770 1 1207 25119 13 3 2 chr17 81632624 81635568 -13637083 + IAPEz-int LTR ERVK 3525 6472 -9 1 1207 3012 93 25 51 chr17 81635577 81636065 -13636586 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1207 6176 162 39 16 chr17 81636065 81637455 -13635196 - Lx5 LINE L1 -225 6825 5399 1 1207 1527 21 0 16 chr17 81637459 81637702 -13634949 - L1Md_F2 LINE L1 0 6582 6382 1 1207 444 96 0 0 chr17 81637702 81637725 -13634926 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1207 37265 73 2 22 chr17 81637725 81645225 -13627426 - L1Md_T LINE L1 0 6582 99 1 1207 10732 143 25 22 chr17 81646238 81648279 -13624372 - Lx5 LINE L1 -470 5407 3361 1 1207 306 0 0 0 chr17 81648279 81648313 -13624338 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 1 1207 1335 43 0 0 chr17 81648314 81648475 -13624176 - B2_Mm1a SINE B2 -32 161 1 2 1207 4493 180 57 36 chr17 81648493 81648634 -13624017 - Lx5 LINE L1 -3511 2366 2259 1 1207 2331 110 38 40 chr17 81648634 81649031 -13623620 - Lx LINE L1 -6 6648 6253 2 1207 4493 180 57 36 chr17 81649031 81649238 -13623413 - Lx5 LINE L1 -3619 2258 2055 1 1207 420 20 0 0 chr17 81649238 81649287 -13623364 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1207 4493 177 121 28 chr17 81649287 81650289 -13622362 - Lx5 LINE L1 -3823 2054 915 1 1207 3362 94 10 8 chr17 81650567 81651048 -13621603 - L1_Mus4 LINE L1 0 6636 6155 2 1207 1109 75 0 14 chr17 81651053 81651065 -13621586 - B1_Mm SINE Alu -1 146 135 2 1207 240 35 0 0 chr17 81651065 81651094 -13621557 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 2 1207 1109 75 0 14 chr17 81651094 81651229 -13621422 - B1_Mm SINE Alu -13 134 1 2 1207 284 331 57 11 chr17 81651323 81651500 -13621151 - Lx8 LINE L1 -148 7325 7141 2 1207 345 293 166 28 chr17 81652326 81652537 -13620114 - L1ME4a LINE L1 -60 6064 5825 2 1207 362 94 0 15 chr17 81653245 81653310 -13619341 - Lx2 LINE L1 0 6997 6934 2 1207 18550 163 6 12 chr17 81653311 81654283 -13618368 - L1VL4 LINE L1 -1047 4836 3860 2 1207 351 0 0 0 chr17 81654283 81654322 -13618329 + (TTTTG)n Simple_repeat Simple_repeat 3 41 0 2 1207 18550 163 6 12 chr17 81654322 81655392 -13617259 - L1VL4 LINE L1 -2024 3859 2792 2 1207 2307 140 10 18 chr17 81655392 81655777 -13616874 - RLTR9A2 LTR ERVK 0 383 2 2 150 18550 161 12 19 chr17 81655777 81658034 -13614617 - L1VL4 LINE L1 -3092 2791 562 2 1208 32 26 0 0 chr17 81658851 81658890 -13613761 + AT_rich Low_complexity Low_complexity 1 39 0 2 1208 483 322 77 61 chr17 81660059 81660574 -13612077 - Lx8 LINE L1 -2 7471 6969 2 1208 302 255 143 25 chr17 81660717 81660954 -13611697 + L1MA8 LINE L1 6027 6291 0 2 1208 219 109 21 21 chr17 81661970 81662017 -13610634 + (TTAA)n Simple_repeat Simple_repeat 3 49 0 2 1208 793 284 91 31 chr17 81662561 81662854 -13609797 - RLTR14 LTR ERV1 0 382 71 2 1208 2386 213 68 15 chr17 81662854 81663402 -13609249 + RLTR20B3 LTR ERVK 1 577 0 2 1208 665 271 18 15 chr17 81663594 81663821 -13608830 - B4A SINE B4 -29 263 2 2 1208 474 317 14 14 chr17 81663849 81663990 -13608661 + B1F1 SINE Alu 2 142 -7 2 1208 302 292 115 14 chr17 81664265 81664295 -13608356 + MER103 DNA DNA 12 41 -125 2 1208 885 50 0 0 chr17 81664295 81664414 -13608237 + (CA)n Simple_repeat Simple_repeat 1 119 0 2 1208 302 292 115 14 chr17 81664414 81664522 -13608129 + MER103 DNA DNA 42 164 -2 2 1208 22 0 0 0 chr17 81664758 81664780 -13607871 + AT_rich Low_complexity Low_complexity 1 22 0 2 1208 618 39 0 0 chr17 81665159 81665236 -13607415 + (TG)n Simple_repeat Simple_repeat 2 78 0 2 1208 647 25 12 0 chr17 81665278 81665359 -13607292 + (CA)n Simple_repeat Simple_repeat 1 82 0 2 1208 353 271 61 79 chr17 81665674 81665838 -13606813 + RLTR8 LTR ERVK 205 365 0 2 1208 599 305 11 22 chr17 81666421 81666602 -13606049 + B3A SINE B2 2 180 -18 2 1208 432 0 0 0 chr17 81666621 81666669 -13605982 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1208 413 19 19 0 chr17 81670322 81670376 -13602275 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 2 1208 389 282 75 55 chr17 81670675 81670930 -13601721 - RLTR42-int LTR ERVK -4117 1405 1146 2 1208 201 74 0 0 chr17 81670952 81670979 -13601672 + (TTA)n Simple_repeat Simple_repeat 2 28 0 2 1208 333 304 124 18 chr17 81671489 81671707 -13600944 - L1MC4a LINE L1 -1956 5926 5686 2 1208 213 293 0 17 chr17 81672172 81672231 -13600420 + CT-rich Low_complexity Low_complexity 3 60 0 2 1208 217 336 143 78 chr17 81672234 81672667 -13599984 - L2a LINE L2 -15 3411 2951 2 1208 204 336 36 36 chr17 81672764 81672875 -13599776 - L2a LINE L2 -623 2796 2686 2 1208 222 91 0 0 chr17 81673023 81673056 -13599595 + (CTG)n Simple_repeat Simple_repeat 1 33 0 2 1208 216 330 78 31 chr17 81675405 81675581 -13597070 + MIR SINE MIR 69 253 -15 2 1208 758 20 30 0 chr17 81675809 81675908 -13596743 - BC1_Mm scRNA scRNA -49 103 2 2 1208 1654 241 21 16 chr17 81675944 81676316 -13596335 - Lx5 LINE L1 -35 7015 6642 2 1208 2275 234 25 18 chr17 81676316 81676864 -13595787 + Lx5 LINE L1 6105 6656 -394 2 1208 537 16 0 0 chr17 81676869 81676931 -13595720 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 1208 528 218 31 46 chr17 81677049 81677179 -13595472 + B1_Mur2 SINE Alu 9 136 -13 2 1208 227 402 27 0 chr17 81682054 81682166 -13590485 - L2b LINE L2 -11 3364 3250 2 1208 189 296 48 24 chr17 81682672 81682755 -13589896 - L2 LINE L2 -1077 2342 2258 2 1208 4941 104 19 4 chr17 81682889 81683613 -13589038 + Lx3_Mus LINE L1 6271 7005 -4 2 1208 1284 63 0 0 chr17 81683667 81683922 -13588729 + (CA)n Simple_repeat Simple_repeat 1 255 0 2 1208 750 221 110 25 chr17 81684219 81684456 -13588195 - Lx6 LINE L1 -13 7447 7191 2 1208 509 55 0 14 chr17 81684698 81684772 -13587879 + (TTA)n Simple_repeat Simple_repeat 2 74 0 2 1208 235 279 23 0 chr17 81685373 81685459 -13587192 + (TATG)n Simple_repeat Simple_repeat 3 90 0 2 1208 291 338 135 0 chr17 81686143 81686291 -13586360 - MER20 DNA MER1_type -1 218 51 2 1208 687 306 125 36 chr17 81686316 81687235 -13585416 - L1M2 LINE L1 -2223 3920 2920 2 1208 4265 203 60 4 chr17 81687240 81688141 -13584510 - Lx5 LINE L1 -3 7047 6097 2 1208 3647 147 47 15 chr17 81688141 81688866 -13583785 - L1_Mur2 LINE L1 -1401 4476 3729 2 1208 2453 78 129 0 chr17 81688884 81689280 -13583371 - RLTR47_MM LTR ERV1 -85 447 1 2 1208 568 315 18 18 chr17 81689365 81689646 -13583005 - RLTR6-int LTR ERV1 -51 7727 7447 2 1208 840 317 87 42 chr17 81690440 81691521 -13581130 - MuRRS4-int LTR ERV1 -5108 2448 1143 2 1208 432 272 32 32 chr17 81691983 81692169 -13580482 - MuRRS4-int LTR ERV1 -6856 700 515 2 1208 214 29 0 54 chr17 81692401 81692438 -13580213 + (TGGGGG)n Simple_repeat Simple_repeat 2 36 0 2 1208 593 163 103 149 chr17 81692679 81692735 -13579916 - RLTR47_MM LTR ERV1 0 532 484 2 1208 1189 75 0 0 chr17 81692735 81692882 -13579769 + B1_Mus1 SINE Alu 1 147 -1 2 1208 207 0 0 0 chr17 81692882 81692905 -13579746 + (CCAA)n Simple_repeat Simple_repeat 2 24 0 2 1208 593 163 103 149 chr17 81692905 81693042 -13579609 - RLTR47_MM LTR ERV1 -49 483 348 2 1208 6859 157 52 76 chr17 81693042 81693259 -13579392 - L1_Mur2 LINE L1 -2142 3735 3527 2 1208 1197 61 0 0 chr17 81693259 81693406 -13579245 + B1_Mm SINE Alu 1 147 0 2 1208 6859 157 52 76 chr17 81693406 81694904 -13577747 - L1_Mur2 LINE L1 -2351 3526 2061 2 1208 607 124 70 0 chr17 81695066 81695195 -13577456 + Lx9 LINE L1 7507 7644 0 2 1208 234 270 10 29 chr17 81695303 81695406 -13577245 + L1_Mur1 LINE L1 1641 1741 -4145 2 1208 266 247 0 99 chr17 81696021 81696102 -13576549 - B4A SINE B4 0 292 220 2 1208 639 261 165 15 chr17 81696123 81696329 -13576322 - B4A SINE B4 -32 260 24 2 1208 204 306 36 18 chr17 81697710 81697809 -13574842 + MIRb SINE MIR 40 146 -122 2 1208 1817 131 45 60 chr17 81697833 81698167 -13574484 + ORR1A4 LTR MaLR 1 329 0 2 1208 368 191 63 54 chr17 81698425 81698536 -13574115 + Lx8 LINE L1 6789 6900 -573 2 1208 243 321 13 13 chr17 81698690 81698769 -13573882 - MLT1L LTR MaLR -349 261 183 2 1208 23 33 0 0 chr17 81699168 81699198 -13573453 + AT_rich Low_complexity Low_complexity 1 30 0 2 1208 360 250 25 0 chr17 81700198 81700278 -13572373 - ID4 SINE ID -1 82 1 2 1208 387 258 90 16 chr17 81700294 81700416 -13572235 - B1F2 SINE Alu -1 148 18 2 1208 262 253 84 0 chr17 81700622 81700717 -13571934 + L1MEg LINE L1 631 733 -5351 2 1208 361 318 18 18 chr17 81700723 81700835 -13571816 + PB1D10 SINE Alu 6 117 0 2 1208 786 153 16 0 chr17 81702923 81703047 -13569604 + B3 SINE B2 4 129 -87 2 1208 22 80 0 0 chr17 81703073 81703123 -13569528 + AT_rich Low_complexity Low_complexity 1 50 0 2 1208 330 308 105 23 chr17 81704334 81704467 -13568184 - L2c LINE L2 -1 3425 3272 2 1208 885 172 0 0 chr17 81704774 81704977 -13567674 + (TA)n Simple_repeat Simple_repeat 1 203 0 2 1208 206 239 0 0 chr17 81704989 81705035 -13567616 + (TATG)n Simple_repeat Simple_repeat 4 49 0 2 1208 1267 80 11 6 chr17 81706294 81706470 -13566181 + MT2C_Mm LTR ERVL 1 177 -298 2 1208 275 331 64 47 chr17 81707498 81707669 -13564982 - Tigger14a DNA MER2_type -149 175 2 2 1208 1394 276 35 93 chr17 81707893 81708611 -13564040 - Lx9 LINE L1 -15 7629 6954 2 1208 325 321 161 44 chr17 81710241 81710489 -13562162 + ORR1E LTR MaLR 74 350 -9 2 1208 281 346 56 82 chr17 81710539 81710734 -13561917 + MLT1I LTR MaLR 40 229 -182 2 1208 752 233 5 77 chr17 81711831 81712026 -13560625 - B3A SINE B2 -16 182 2 2 1208 21 0 0 0 chr17 81712408 81712429 -13560222 + AT_rich Low_complexity Low_complexity 1 21 0 2 1208 401 316 172 31 chr17 81712709 81712964 -13559687 + B4 SINE B4 2 292 0 2 1208 300 70 0 0 chr17 81712980 81713023 -13559628 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1208 417 20 0 0 chr17 81713043 81713093 -13559558 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1208 2061 279 26 32 chr17 81713094 81713713 -13558938 - MMAR1 DNA Mariner -3 1283 669 2 1208 784 162 7 0 chr17 81713821 81713957 -13558694 - URR1B DNA MER1_type 0 225 89 2 1208 455 211 156 32 chr17 81713957 81714002 -13558649 + CYRA11_Mm Unknown Y-chromosome 172 375 -242 2 1208 1871 215 69 40 chr17 81713989 81714468 -13558183 - MMAR1 DNA Mariner -740 546 54 2 1208 916 271 76 88 chr17 81714557 81715043 -13557608 + RMER1C Other Other 556 1035 -307 2 1208 602 133 92 37 chr17 81715063 81715172 -13557479 - B2_Mm2 SINE B2 -79 116 2 2 1208 1062 241 41 10 chr17 81715173 81715467 -13557184 + RMER1C Other Other 1027 1329 -13 2 1208 257 268 14 0 chr17 81715478 81715549 -13557102 - MMAR1 DNA Mariner -1214 72 1 2 1208 297 151 0 0 chr17 81715554 81715607 -13557044 + (TA)n Simple_repeat Simple_repeat 1 53 0 2 1208 39 0 0 0 chr17 81715645 81715684 -13556967 + AT_rich Low_complexity Low_complexity 1 39 0 2 1208 343 297 55 0 chr17 81717026 81717117 -13555534 + PB1D7 SINE Alu 19 114 -6 2 1208 459 0 0 0 chr17 81717123 81717174 -13555477 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1208 368 111 16 0 chr17 81717178 81717241 -13555410 + (GGGA)n Simple_repeat Simple_repeat 3 66 0 2 1208 225 301 58 35 chr17 81719627 81719713 -13552938 - MamGypLTR1c LTR Gypsy -498 305 218 2 1208 1163 88 0 0 chr17 81720513 81720661 -13551990 + B1_Mus1 SINE Alu 1 148 0 2 1208 22 0 0 0 chr17 81720661 81720683 -13551968 + AT_rich Low_complexity Low_complexity 1 22 0 3 1208 509 205 35 9 chr17 81720701 81720814 -13551837 + PB1D10 SINE Alu 1 116 -1 3 1208 396 312 159 37 chr17 81721299 81721595 -13551056 - ORR1D2 LTR MaLR -31 339 8 3 1208 2426 36 2 299 chr17 81723881 81724436 -13548215 - RLTR10 LTR ERVK 0 390 1 3 1208 268 286 0 14 chr17 81725367 81725438 -13547213 + GA-rich Low_complexity Low_complexity 1 70 0 3 1208 6309 73 56 12 chr17 81725658 81727033 -13545618 + L1_Mus1 LINE L1 5132 6566 -1 3 1208 246 62 0 0 chr17 81727227 81727259 -13545392 + (GA)n Simple_repeat Simple_repeat 1 32 0 3 1208 33490 47 1 3 chr17 81727282 81732276 -13540375 + L1Md_F2 LINE L1 643 5586 -297 3 1208 8158 44 2 1 chr17 81732276 81733268 -13539383 + L1Md_F2 LINE L1 5587 6579 -3 3 1208 1235 253 22 15 chr17 81733268 81733313 -13539338 + L1P5 LINE L1 5616 5664 -492 3 1208 650 321 5 41 chr17 81733560 81733655 -13538996 - ID_B1 SINE B4 -11 213 127 3 1208 2446 111 68 59 chr17 81733655 81734126 -13538525 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1208 650 321 5 41 chr17 81734126 81734251 -13538400 - ID_B1 SINE B4 -98 126 1 3 1208 21 0 0 0 chr17 81734259 81734280 -13538371 + AT_rich Low_complexity Low_complexity 1 21 0 3 1208 317 344 38 8 chr17 81734357 81734489 -13538162 + MIR SINE MIR 102 237 -25 3 1208 1098 135 0 0 chr17 81734582 81734760 -13537891 + (TTC)n Simple_repeat Simple_repeat 1 178 0 3 1208 317 311 79 19 chr17 81735136 81735352 -13537299 - ERVL-E-int LTR ERVL -429 5238 5010 3 1208 480 233 0 0 chr17 81737029 81737115 -13535536 - B3 SINE B2 -130 86 1 3 1208 285 0 43 22 chr17 81737259 81737305 -13535346 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 3 1208 32 0 0 0 chr17 81737374 81737406 -13535245 + AT_rich Low_complexity Low_complexity 1 32 0 3 1208 306 257 28 19 chr17 81737406 81737513 -13535138 - L1M2 LINE L1 -579 5610 5503 3 1208 598 211 21 83 chr17 81737974 81738119 -13534532 + B1_Mur2 SINE Alu 1 136 -13 3 1208 304 252 24 192 chr17 81737978 81738145 -13534506 + ID_B1 SINE B4 86 224 0 3 1208 309 135 0 0 chr17 81738145 81738197 -13534454 + (GAAA)n Simple_repeat Simple_repeat 1 52 0 3 1208 253 24 73 0 chr17 81738201 81738242 -13534409 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 3 1208 463 253 27 7 chr17 81738512 81738659 -13533992 - L1M2 LINE L1 -808 5483 5334 3 1208 555 237 8 8 chr17 81738674 81738793 -13533858 - ID_B1 SINE B4 0 224 106 3 1208 471 298 40 8 chr17 81738884 81739009 -13533642 - ID_B1 SINE B4 -95 129 1 3 1208 1667 210 16 24 chr17 81739622 81739997 -13532654 - ORR1D1 LTR MaLR -2 372 1 3 1208 373 282 32 75 chr17 81740098 81740286 -13532365 + MER121 Unknown Unknown 61 240 -172 3 1208 333 47 0 0 chr17 81740388 81740431 -13532220 + (CACAA)n Simple_repeat Simple_repeat 1 43 0 3 1208 220 171 0 0 chr17 81741301 81741336 -13531315 + MER5A DNA MER1_type 77 111 -78 3 1208 406 308 92 28 chr17 81741646 81741854 -13530797 - MLT1C LTR MaLR -18 487 259 3 1208 1041 145 0 0 chr17 81741868 81742047 -13530604 + (CTG)n Simple_repeat Simple_repeat 2 180 0 3 1208 996 250 5 0 chr17 81742092 81742280 -13530371 - B3 SINE B2 -17 199 11 3 1208 309 208 54 61 chr17 81742293 81742405 -13530246 - B1_Mur1 SINE Alu -1 148 4 3 1208 383 330 88 18 chr17 81742405 81742616 -13530035 - MLT1C LTR MaLR -160 230 4 3 1208 333 0 0 0 chr17 81742823 81742860 -13529791 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 1208 267 245 186 31 chr17 81743814 81743911 -13528740 + MIRc SINE MIR 13 124 -144 3 1208 27 0 0 0 chr17 81743974 81744001 -13528650 + AT_rich Low_complexity Low_complexity 1 27 0 3 1208 194 81 0 26 chr17 81744046 81744084 -13528567 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 3 1208 805 152 268 18 chr17 81744744 81744912 -13527739 + B3 SINE B2 1 210 -6 3 1208 252 0 0 0 chr17 81744943 81744971 -13527680 + (TCTG)n Simple_repeat Simple_repeat 3 30 0 3 1208 844 174 27 53 chr17 81745420 81745608 -13527043 + MT2B LTR ERVL 419 601 0 3 1208 225 77 37 37 chr17 81745618 81745672 -13526979 + T-rich Low_complexity Low_complexity 6 59 0 3 1208 1141 111 14 82 chr17 81745672 81745879 -13526772 - B2_Mm2 SINE B2 0 195 3 3 1208 321 301 118 22 chr17 81746221 81746357 -13526294 - ORR1D2 LTR MaLR -26 353 205 3 1208 357 222 9 75 chr17 81746398 81746505 -13526146 - ORR1D2 LTR MaLR -268 102 3 3 1208 188 206 0 16 chr17 81746558 81746615 -13526036 + CT-rich Low_complexity Low_complexity 9 64 0 3 1208 408 67 0 0 chr17 81746615 81746675 -13525976 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 1208 36266 30 1 0 chr17 81746720 81753583 -13519068 - L1Md_T LINE L1 0 6585 1 3 1208 360 64 0 0 chr17 81753904 81753951 -13518700 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 1208 198 71 0 0 chr17 81754032 81754060 -13518591 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 1208 921 167 209 0 chr17 81754149 81754322 -13518329 + RLTR24 LTR ERV1 1 210 -319 3 1208 2649 135 29 12 chr17 81754322 81754743 -13517908 - RLTR23 LTR ERV1 0 430 3 3 1208 921 167 209 0 chr17 81754743 81754777 -13517874 + RLTR24 LTR ERV1 211 251 -278 3 1208 1575 171 60 27 chr17 81754777 81755181 -13517470 - RLTR1 LTR ERV1 0 624 135 3 1208 1070 181 79 9 chr17 81755288 81755516 -13517135 + RLTR24 LTR ERV1 286 529 0 3 1208 449 279 132 54 chr17 81756129 81756478 -13516173 - Kanga2_a DNA Tc2 -158 730 355 3 1208 562 219 90 25 chr17 81756458 81756580 -13516071 + B4 SINE B4 141 270 -22 3 1208 320 0 25 0 chr17 81756580 81756620 -13516031 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 1208 243 0 0 0 chr17 81756855 81756882 -13515769 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1208 615 299 62 5 chr17 81756909 81757104 -13515547 - B4A SINE B4 -30 262 57 3 1208 223 341 72 16 chr17 81757869 81757994 -13514657 - MIRc SINE MIR -47 221 90 3 1208 448 327 69 86 chr17 81759679 81760032 -13512619 - ORR1E LTR MaLR 0 374 14 3 1208 633 293 33 70 chr17 81760113 81760326 -13512325 + MLT1A1 LTR MaLR 200 404 -4 3 1208 1355 73 0 0 chr17 81760491 81760683 -13511968 + L1_Mur1 LINE L1 3933 4124 -1762 3 1208 228 340 56 19 chr17 81762465 81762573 -13510078 - ORR1E LTR MaLR -241 118 7 3 1208 595 253 152 60 chr17 81762757 81763190 -13509461 - RLTR12B LTR ERVK -47 481 9 3 1208 6107 148 24 40 chr17 81763273 81764360 -13508291 - Lx2 LINE L1 0 6997 5929 3 1208 228 298 104 19 chr17 81764366 81764472 -13508179 - B1_Mus2 SINE Alu -32 115 1 3 1208 542 319 12 6 chr17 81764472 81764555 -13508096 - B4A SINE B4 -207 85 2 3 1208 464 246 8 38 chr17 81764615 81764746 -13507905 - MER53 DNA hAT -65 128 2 3 1208 1065 30 0 0 chr17 81765208 81765339 -13507312 - B1_Mus1 SINE Alu 0 148 18 3 1208 246 309 0 29 chr17 81766254 81766324 -13506327 + ID2 SINE ID 5 72 -11 3 1208 760 319 44 11 chr17 81766737 81767010 -13505641 - B4 SINE B4 -9 283 2 3 1208 376 368 75 5 chr17 81767259 81767445 -13505206 - MIR SINE MIR -47 215 17 3 1208 264 301 24 12 chr17 81768053 81768137 -13504514 + B4A SINE B4 52 136 -156 3 1208 238 288 0 0 chr17 81768166 81768239 -13504412 + (CA)n Simple_repeat Simple_repeat 2 74 0 3 1208 370 98 0 0 chr17 81769134 81769185 -13503466 - HAL1-3A_ME LINE L1 -832 2026 1976 3 1208 705 208 0 0 chr17 81769185 81769353 -13503298 + (TG)n Simple_repeat Simple_repeat 2 169 0 3 1208 339 44 0 0 chr17 81770013 81770058 -13502593 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1208 842 277 96 36 chr17 81770299 81770662 -13501989 - MER31B LTR ERV1 -2 464 80 3 1208 21 0 0 0 chr17 81771051 81771072 -13501579 + AT_rich Low_complexity Low_complexity 1 21 0 3 1208 342 0 0 0 chr17 81771072 81771110 -13501541 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1208 543 295 28 41 chr17 81771124 81771269 -13501382 - B3A SINE B2 -55 143 1 3 1208 705 85 0 0 chr17 81771404 81771510 -13501141 + (TC)n Simple_repeat Simple_repeat 2 107 0 3 1208 338 289 0 10 chr17 81771630 81771728 -13500923 - B4A SINE B4 -66 226 130 3 1208 414 0 0 0 chr17 81774686 81774732 -13497919 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1208 198 295 82 45 chr17 81775493 81775603 -13497048 + L3 LINE CR1 2079 2192 -2297 3 1208 237 43 64 0 chr17 81776379 81776426 -13496225 + (CAA)n Simple_repeat Simple_repeat 2 51 0 3 1208 416 331 42 62 chr17 81776614 81776807 -13495844 - MER5A DNA MER1_type 0 189 1 3 1208 268 89 17 35 chr17 81778126 81778184 -13494467 + (TTTG)n Simple_repeat Simple_repeat 1 57 0 3 1208 21 0 0 0 chr17 81778724 81778745 -13493906 + AT_rich Low_complexity Low_complexity 1 21 0 3 1208 306 0 0 0 chr17 81778910 81778944 -13493707 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 1208 245 0 0 82 chr17 81779761 81779810 -13492841 + (TAG)n Simple_repeat Simple_repeat 1 45 0 3 1208 21 0 0 0 chr17 81782367 81782388 -13490263 + AT_rich Low_complexity Low_complexity 1 21 0 3 1208 21 36 0 0 chr17 81783746 81783774 -13488877 + AT_rich Low_complexity Low_complexity 1 28 0 3 1208 202 62 62 0 chr17 81785391 81785423 -13487228 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 1208 197 318 76 0 chr17 81785924 81785990 -13486661 + L2b LINE L2 3244 3314 -61 3 1208 308 44 44 0 chr17 81787703 81787748 -13484903 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 3 1208 243 88 0 0 chr17 81787972 81788006 -13484645 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 1209 303 301 191 0 chr17 81789251 81789387 -13483264 + RSINE1 SINE B4 1 162 -3 3 1209 239 0 32 0 chr17 81790205 81790236 -13482415 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3 1209 211 275 138 0 chr17 81791850 81791930 -13480721 + MIR3 SINE MIR 96 186 -22 3 1209 181 304 53 18 chr17 81793594 81793708 -13478943 - MER5A DNA MER1_type -25 164 47 3 1209 219 69 0 0 chr17 81793983 81794012 -13478639 + (T)n Simple_repeat Simple_repeat 1 29 0 3 1209 536 265 53 0 chr17 81794305 81794437 -13478214 - B3A SINE B2 -59 139 1 3 1209 188 0 74 0 chr17 81795194 81795221 -13477430 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 4 1209 241 331 137 6 chr17 81795408 81795590 -13477061 - MIR SINE MIR -1 261 56 4 1209 1345 176 14 9 chr17 81795837 81796060 -13476591 + URR1B DNA MER1_type 2 225 0 4 1209 217 250 19 0 chr17 81796458 81796566 -13476085 + CT-rich Low_complexity Low_complexity 1 110 0 4 1209 223 116 32 89 chr17 81797299 81797422 -13475229 + (TATATG)n Simple_repeat Simple_repeat 4 119 0 4 1209 429 141 0 0 chr17 81797677 81797748 -13474903 + (TA)n Simple_repeat Simple_repeat 1 71 0 4 1209 516 236 84 30 chr17 81798057 81798188 -13474463 - B1_Mur1 SINE Alu -11 138 1 4 1209 235 317 45 69 chr17 81801409 81801656 -13470995 + L1MB8 LINE L1 5938 6178 0 4 1209 814 290 26 37 chr17 81803390 81803662 -13468989 - B4A SINE B4 -18 274 6 4 1209 191 377 31 54 chr17 81805445 81805574 -13467077 - MIRb SINE MIR -70 198 73 4 1209 297 0 0 0 chr17 81805740 81805773 -13466878 + (TC)n Simple_repeat Simple_repeat 2 34 0 4 1209 360 0 0 0 chr17 81805773 81805812 -13466839 + (TA)n Simple_repeat Simple_repeat 1 40 0 4 1209 1420 265 65 5 chr17 81806891 81807274 -13465377 + Lx7 LINE L1 6794 7199 -497 4 1209 212 233 217 0 chr17 81808376 81808436 -13464215 + MER5A DNA MER1_type 6 78 -111 4 1209 1018 98 274 6 chr17 81809207 81809382 -13463269 + URR1A DNA MER1_type 5 226 0 4 1209 360 0 0 0 chr17 81810019 81810059 -13462592 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1209 249 246 43 0 chr17 81810203 81810272 -13462379 + L1MA5 LINE L1 6228 6299 -1 4 1209 393 260 67 12 chr17 81810933 81811039 -13461612 + PB1D9 SINE Alu 5 116 -33 4 1209 237 108 0 0 chr17 81811074 81811111 -13461540 + (TCTCTG)n Simple_repeat Simple_repeat 6 42 0 4 1209 567 0 0 0 chr17 81811117 81811180 -13461471 + (GA)n Simple_repeat Simple_repeat 1 63 0 4 1209 228 293 111 0 chr17 81812161 81812260 -13460391 + MIRc SINE MIR 93 202 -66 4 1209 188 86 29 0 chr17 81812493 81812528 -13460123 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 4 1209 270 0 0 0 chr17 81812668 81812698 -13459953 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 4 1209 771 201 0 0 chr17 81813478 81813657 -13458994 + (CAG)n Simple_repeat Simple_repeat 2 180 0 4 1209 413 279 13 7 chr17 81813672 81813827 -13458824 + HAL1-2a_MD LINE L1 2350 2505 -519 4 1209 191 128 0 49 chr17 81813841 81813882 -13458769 + (CAG)n Simple_repeat Simple_repeat 2 40 0 4 1209 1861 166 74 28 chr17 81813882 81814268 -13458383 + RMER17C LTR ERVK 1 405 -5 4 1209 261 139 0 0 chr17 81814268 81814311 -13458340 + (CAG)n Simple_repeat Simple_repeat 1 43 0 4 1209 250 45 0 43 chr17 81815144 81815190 -13457461 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4 1209 350 287 33 0 chr17 81815360 81815482 -13457169 + L1M2 LINE L1 5698 5823 -474 4 1209 432 55 0 0 chr17 81816947 81817002 -13455649 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 1209 432 55 0 0 chr17 81818170 81818225 -13454426 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 1209 213 132 0 0 chr17 81819095 81819133 -13453518 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1209 244 179 0 0 chr17 81819697 81819753 -13452898 - Lx3_Mus LINE L1 0 7009 6954 4 1209 396 0 0 0 chr17 81820111 81820155 -13452496 + (TCTA)n Simple_repeat Simple_repeat 3 46 0 4 1209 1316 113 11 0 chr17 81822106 81822283 -13450368 + B2_Mm1t SINE B2 1 179 -14 4 1209 317 148 0 18 chr17 81822330 81822385 -13450266 + B2_Mm2 SINE B2 47 100 -95 4 1209 473 225 13 4 chr17 81822437 81822679 -13449972 + CT-rich Low_complexity Low_complexity 1 244 0 4 1209 218 347 14 0 chr17 81823016 81823258 -13449393 + (TG)n Simple_repeat Simple_repeat 1 245 0 4 1209 471 18 0 0 chr17 81823386 81823442 -13449209 + (TA)n Simple_repeat Simple_repeat 1 56 0 4 1209 350 115 0 16 chr17 81824857 81824919 -13447732 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 1209 216 284 58 99 chr17 81824979 81825100 -13447551 + PB1D10 SINE Alu 1 116 -1 4 1209 639 311 134 4 chr17 81825360 81825599 -13447052 + B4A SINE B4 3 272 -20 4 1209 423 0 0 0 chr17 81825640 81825687 -13446964 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1209 180 0 0 0 chr17 81829869 81829889 -13442762 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 4 1209 698 128 47 0 chr17 81830329 81830566 -13442085 + (TAGA)n Simple_repeat Simple_repeat 1 248 0 4 1209 419 312 38 60 chr17 81831396 81831435 -13441216 + ID SINE ID 40 74 -150 4 1209 602 261 14 34 chr17 81831435 81831582 -13441069 + B1_Mur1 SINE Alu 3 146 -3 4 1209 26 50 0 0 chr17 81831642 81831682 -13440969 + AT_rich Low_complexity Low_complexity 1 40 0 4 1209 233 321 170 19 chr17 81834144 81834303 -13438348 + MER113 DNA MER1_type 125 307 -214 4 1209 1024 152 23 0 chr17 81835844 81836021 -13436630 - URR1A DNA MER1_type 0 226 46 4 1209 248 344 108 9 chr17 81837870 81838011 -13434640 + MIR SINE MIR 32 191 -85 4 1209 200 328 127 46 chr17 81839051 81839358 -13433293 + L3 LINE CR1 2144 2475 -2014 4 1209 555 158 24 0 chr17 81839654 81839781 -13432870 + (TA)n Simple_repeat Simple_repeat 1 130 0 4 1209 543 31 0 0 chr17 81839888 81839953 -13432698 + (TTCC)n Simple_repeat Simple_repeat 1 65 0 4 1209 293 295 67 11 chr17 81843534 81843623 -13429028 + PB1D10 SINE Alu 2 95 -22 4 1209 643 210 40 0 chr17 81843546 81843670 -13428981 + ID_B1 SINE B4 95 223 -1 4 1209 619 213 21 14 chr17 81845230 81845373 -13427278 + RSINE1 SINE B4 3 146 -19 4 1209 285 29 0 0 chr17 81845389 81845423 -13427228 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1209 493 200 24 0 chr17 81845549 81845674 -13426977 - Lx9 LINE L1 -6 7638 7511 4 1209 739 207 36 5 chr17 81845666 81845860 -13426791 - Lx9 LINE L1 -70 7574 7375 4 1209 186 133 0 0 chr17 81846022 81846052 -13426599 + (T)n Simple_repeat Simple_repeat 1 30 0 4 1209 27 62 0 0 chr17 81846565 81846613 -13426038 + AT_rich Low_complexity Low_complexity 1 48 0 4 1209 243 146 0 0 chr17 81847121 81847162 -13425489 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1209 668 75 53 0 chr17 81847255 81847349 -13425302 + MT2B LTR ERVL 1 99 -502 4 1209 881 305 38 75 chr17 81847779 81848196 -13424455 + MTE2a LTR MaLR 9 404 -15 4 1209 4228 92 28 0 chr17 81848936 81849579 -13423072 - L1_Mm LINE L1 -1730 4153 3493 4 1209 2258 66 0 41 chr17 81849579 81849894 -13422757 + L1_Mus1 LINE L1 6265 6566 -1 4 1209 876 61 0 0 chr17 81849899 81850014 -13422637 + (GAAA)n Simple_repeat Simple_repeat 2 116 0 4 1209 22 0 0 0 chr17 81851240 81851262 -13421389 + AT_rich Low_complexity Low_complexity 1 22 0 4 1209 383 272 45 52 chr17 81851391 81851546 -13421105 + MER5A1 DNA MER1_type 13 166 0 4 1209 187 380 19 39 chr17 81851681 81851785 -13420866 + MER5B DNA MER1_type 74 175 -3 4 1209 286 259 27 27 chr17 81851837 81851948 -13420703 - L1_Rod LINE L1 -3292 2555 2445 4 1209 577 295 278 9 chr17 81852483 81852878 -13419773 + L1MB7 LINE L1 5272 5781 -403 4 1209 207 0 0 0 chr17 81852878 81852901 -13419750 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 4 1209 440 280 154 8 chr17 81852901 81853036 -13419615 + L1MB7 LINE L1 5782 5933 -251 4 1209 842 71 16 0 chr17 81853036 81853162 -13419489 + (TCTCTG)n Simple_repeat Simple_repeat 3 130 0 4 1209 440 280 154 8 chr17 81853162 81853213 -13419438 + L1MB7 LINE L1 5934 5991 -193 4 1209 192 279 115 11 chr17 81854454 81854541 -13418110 + MIRc SINE MIR 171 266 -2 4 1209 393 304 56 0 chr17 81855303 81855428 -13417223 + B1F SINE Alu 17 148 -1 4 1209 22 35 0 0 chr17 81855934 81855963 -13416688 + AT_rich Low_complexity Low_complexity 1 29 0 4 1209 268 274 16 16 chr17 81856039 81856102 -13416549 + ID4_ SINE ID 8 70 -13 4 1209 295 312 20 20 chr17 81856264 81856362 -13416289 + PB1D10 SINE Alu 3 100 -17 4 1209 582 182 174 0 chr17 81856654 81856893 -13415758 + MTB LTR MaLR 1 337 -63 4 1209 432 0 0 0 chr17 81856899 81856947 -13415704 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1209 1201 236 19 11 chr17 81857343 81857613 -13415038 - B4 SINE B4 -18 274 3 4 1209 378 0 0 0 chr17 81862291 81862333 -13410318 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1209 306 148 0 0 chr17 81863609 81863663 -13408988 + (CAAAC)n Simple_repeat Simple_repeat 1 54 0 4 1209 672 254 43 14 chr17 81865087 81865295 -13407356 + ID_B1 SINE B4 5 218 -6 4 1209 675 184 0 0 chr17 81869343 81869479 -13403172 + T-rich Low_complexity Low_complexity 1 136 0 4 1209 333 0 0 0 chr17 81869530 81869567 -13403084 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 1209 378 276 0 0 chr17 81870163 81870337 -13402314 + (TG)n Simple_repeat Simple_repeat 2 175 0 4 1209 1522 0 11 0 chr17 81872425 81872603 -13400048 + (TTC)n Simple_repeat Simple_repeat 1 180 0 4 1209 1008 68 0 0 chr17 81872606 81872739 -13399912 + (TTCTCC)n Simple_repeat Simple_repeat 6 138 0 4 1209 516 308 16 6 chr17 81873059 81873242 -13399409 - Charlie5 DNA MER1_type -70 2554 2370 4 1209 216 0 0 0 chr17 81873489 81873513 -13399138 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 1209 346 65 0 0 chr17 81873808 81873870 -13398781 + L1Md_F3 LINE L1 6521 6582 -2 4 1209 1608 179 26 73 chr17 81875492 81875835 -13396816 + ORR1C2 LTR MaLR 1 327 -57 4 1209 459 141 0 0 chr17 81875858 81875936 -13396715 + (TCC)n Simple_repeat Simple_repeat 1 78 0 4 1209 311 252 241 15 chr17 81875936 81875962 -13396689 - B4A SINE B4 -46 246 88 4 1209 499 165 42 2 chr17 81875962 81876065 -13396586 - B1_Mur4 SINE Alu -6 114 3 4 1209 485 122 0 0 chr17 81876065 81876139 -13396512 + ORR1C1 LTR MaLR 305 378 0 4 1209 22 0 0 0 chr17 81879014 81879036 -13393615 + AT_rich Low_complexity Low_complexity 1 22 0 5 1209 219 69 0 0 chr17 81879099 81879128 -13393523 + (TTAA)n Simple_repeat Simple_repeat 4 32 0 5 1209 23 0 0 0 chr17 81879469 81879492 -13393159 + AT_rich Low_complexity Low_complexity 1 23 0 5 1209 797 206 7 0 chr17 81882123 81882264 -13390387 - B1_Mus1 SINE Alu -1 147 6 5 1209 317 233 67 10 chr17 81882658 81882762 -13389889 + Lx7 LINE L1 7511 7620 -76 5 1209 2876 57 0 3 chr17 81882791 81883175 -13389476 + L1_Mus3 LINE L1 5908 6290 -348 5 1209 193 255 0 38 chr17 81883872 81883925 -13388726 - L3 LINE CR1 -2153 2336 2286 5 1209 480 18 0 0 chr17 81884066 81884123 -13388528 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 1209 297 0 0 0 chr17 81884123 81884155 -13388496 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1209 835 290 80 29 chr17 81884563 81884801 -13387850 - B4A SINE B4 -15 277 28 5 1209 191 250 0 43 chr17 81885150 81885196 -13387455 + L4 LINE RTE 373 416 -1613 5 1209 300 302 0 54 chr17 81886771 81886883 -13385768 + PB1D10 SINE Alu 9 114 -3 5 1209 294 29 0 0 chr17 81886928 81886963 -13385688 + (CCAA)n Simple_repeat Simple_repeat 1 35 0 5 1209 237 178 0 0 chr17 81888662 81888707 -13383944 + CT-rich Low_complexity Low_complexity 4 48 0 5 1209 660 111 0 0 chr17 81891184 81891283 -13381368 + (TC)n Simple_repeat Simple_repeat 2 100 0 5 1209 213 167 0 0 chr17 81891284 81891313 -13381338 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 1209 402 21 0 0 chr17 81891313 81891360 -13381291 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1209 213 167 0 0 chr17 81891360 81891372 -13381279 + (TA)n Simple_repeat Simple_repeat 2 13 0 5 1209 577 333 55 5 chr17 81891372 81891571 -13381080 - B3 SINE B2 -2 214 6 5 1209 492 18 0 0 chr17 81892571 81892628 -13380023 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1209 314 80 20 0 chr17 81895239 81895289 -13377362 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 1209 649 239 0 54 chr17 81895316 81895484 -13377167 - RSINE1 SINE B4 -2 163 5 5 1209 186 254 50 17 chr17 81895882 81895942 -13376709 - MIR SINE MIR -119 143 82 5 1209 643 285 30 18 chr17 81896078 81896295 -13376356 + B3A SINE B2 2 211 -5 5 1209 579 144 0 0 chr17 81896457 81896554 -13376097 + (TA)n Simple_repeat Simple_repeat 1 97 0 5 1209 249 108 0 0 chr17 81896556 81896593 -13376058 + (CAGA)n Simple_repeat Simple_repeat 3 39 0 5 1209 198 0 0 0 chr17 81897332 81897354 -13375297 + (CACAG)n Simple_repeat Simple_repeat 4 25 0 5 1209 687 12 0 0 chr17 81897732 81897812 -13374839 + (TG)n Simple_repeat Simple_repeat 2 81 0 5 1209 458 241 194 18 chr17 81898655 81898864 -13373787 + MLT1A LTR MaLR 110 369 -21 5 1209 27 49 0 0 chr17 81899316 81899357 -13373294 + AT_rich Low_complexity Low_complexity 1 41 0 5 1209 22 0 0 0 chr17 81900662 81900684 -13371967 + AT_rich Low_complexity Low_complexity 1 22 0 5 1209 221 315 0 0 chr17 81901964 81902037 -13370614 + T-rich Low_complexity Low_complexity 5 77 0 5 1209 186 103 0 0 chr17 81903414 81903443 -13369208 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1209 369 0 0 0 chr17 81906791 81906832 -13365819 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1209 465 346 128 30 chr17 81908665 81909002 -13363649 + MLT1I LTR MaLR 36 405 -6 5 1209 2620 42 98 0 chr17 81909261 81909315 -13363336 - L1Md_F3 LINE L1 -15 6569 6516 5 1209 186 71 0 0 chr17 81909315 81909343 -13363308 + (CCCA)n Simple_repeat Simple_repeat 1 28 0 5 1209 2620 42 98 0 chr17 81909343 81909624 -13363027 - L1Md_F3 LINE L1 -69 6515 6202 5 1209 210 100 24 24 chr17 81911193 81911234 -13361417 + (CAAAA)n Simple_repeat Simple_repeat 4 44 0 5 1209 960 98 8 21 chr17 81911717 81911956 -13360695 + (TCTA)n Simple_repeat Simple_repeat 1 236 0 5 1209 1098 50 6 24 chr17 81911969 81912133 -13360518 + (TCTA)n Simple_repeat Simple_repeat 3 163 0 5 1209 339 307 148 8 chr17 81912775 81912903 -13359748 + MER5A DNA MER1_type 44 189 0 5 1209 441 54 0 0 chr17 81914426 81914482 -13358169 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 1209 270 0 0 0 chr17 81914482 81914512 -13358139 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1209 204 40 0 0 chr17 81916397 81916422 -13356229 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 5 1209 206 355 122 24 chr17 81917179 81917384 -13355267 + MIRc SINE MIR 5 229 -39 5 1209 282 102 74 74 chr17 81918668 81918763 -13353888 + (CTATA)n Simple_repeat Simple_repeat 2 96 0 5 1209 504 298 32 0 chr17 81918808 81918966 -13353685 - RSINE1 SINE B4 0 165 3 5 1209 1297 226 64 20 chr17 81919015 81919359 -13353292 + Lx6 LINE L1 7097 7455 -5 5 1210 25 31 0 0 chr17 81920137 81920169 -13352482 + AT_rich Low_complexity Low_complexity 1 32 0 5 1210 268 376 0 22 chr17 81922868 81923004 -13349647 + Lx8 LINE L1 7197 7329 -144 5 1210 636 200 0 0 chr17 81923011 81923146 -13349505 + (CATA)n Simple_repeat Simple_repeat 2 136 0 5 1210 955 187 113 0 chr17 81924203 81924406 -13348245 - URR1A DNA MER1_type 0 226 1 5 1210 209 77 0 49 chr17 81924999 81925040 -13347611 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 5 1210 351 0 0 0 chr17 81926366 81926405 -13346246 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1210 261 57 0 0 chr17 81927061 81927096 -13345555 + (ATG)n Simple_repeat Simple_repeat 2 36 0 5 1210 186 305 48 78 chr17 81928950 81929053 -13343598 + MIR SINE MIR 1 100 -162 5 1210 246 293 0 62 chr17 81930056 81930136 -13342515 + ID4_ SINE ID 7 81 -2 5 1210 240 35 0 0 chr17 81930894 81930923 -13341728 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1210 288 0 0 0 chr17 81930923 81930954 -13341697 + (GA)n Simple_repeat Simple_repeat 2 33 0 5 1210 824 157 264 0 chr17 81931769 81931947 -13340704 + URR1A DNA MER1_type 1 225 -1 5 1210 564 295 0 0 chr17 81933398 81933537 -13339114 - B1_Mur2 SINE Alu -8 141 3 5 1210 1153 89 0 0 chr17 81936479 81936625 -13336026 - B1_Mus2 SINE Alu -1 146 1 5 1210 521 304 55 103 chr17 81937647 81937937 -13334714 + ORR1E LTR MaLR 32 307 -52 5 1210 438 20 0 0 chr17 81938420 81938471 -13334180 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 1210 234 0 0 0 chr17 81938471 81938496 -13334155 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 1210 412 301 175 7 chr17 81938948 81939102 -13333549 + B4A SINE B4 113 292 0 5 1210 230 262 0 7 chr17 81939102 81939252 -13333399 + (CA)n Simple_repeat Simple_repeat 1 149 0 5 1210 345 80 0 20 chr17 81939297 81939348 -13333303 + HAL1-3A_ME LINE L1 1976 2025 -833 5 1210 22 0 0 0 chr17 81939656 81939678 -13332973 + AT_rich Low_complexity Low_complexity 1 22 0 5 1210 23 68 0 0 chr17 81939711 81939755 -13332896 + AT_rich Low_complexity Low_complexity 1 44 0 5 1210 1237 87 49 5 chr17 81941063 81941248 -13331403 - B2_Mm2 SINE B2 -2 193 1 5 1210 248 303 41 8 chr17 81942231 81942354 -13330297 - MER5A1 DNA MER1_type -37 129 3 5 1210 246 216 87 58 chr17 81944211 81944314 -13328337 + L1Md_F2 LINE L1 5644 5749 -833 5 1210 250 231 149 28 chr17 81944328 81944435 -13328216 + L1MB8 LINE L1 5844 5963 -215 5 1210 193 352 91 18 chr17 81945621 81945731 -13326920 + L3b LINE CR1 328 445 -37 5 1210 352 321 88 65 chr17 81946664 81946834 -13325817 - B4A SINE B4 -86 206 33 5 1210 428 225 12 0 chr17 81946889 81946969 -13325682 + URR1B DNA MER1_type 1 81 -144 5 1210 477 0 0 0 chr17 81946969 81947022 -13325629 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1210 453 19 0 0 chr17 81947119 81947173 -13325478 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 5 1210 529 256 48 6 chr17 81947446 81947611 -13325040 - L1MD LINE L1 -790 5452 5281 5 1210 21 36 0 0 chr17 81947863 81947891 -13324760 + AT_rich Low_complexity Low_complexity 1 28 0 5 1210 627 285 0 0 chr17 81949282 81949426 -13323225 - B3A SINE B2 -53 145 2 5 1210 414 0 0 0 chr17 81949434 81949480 -13323171 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1210 296 95 0 0 chr17 81949732 81949774 -13322877 + B1_Mus2 SINE Alu 1 42 -105 5 1210 253 351 88 47 chr17 81950120 81950335 -13322316 + MIR SINE MIR 37 260 -2 5 1210 781 267 78 48 chr17 81950406 81950674 -13321977 - MTEb LTR MaLR -87 292 17 5 1210 265 298 0 87 chr17 81951086 81951189 -13321462 - MER5A DNA MER1_type -56 133 40 5 1210 22 99 0 0 chr17 81952148 81952219 -13320432 + AT_rich Low_complexity Low_complexity 1 71 0 5 1210 248 158 75 0 chr17 81952965 81953098 -13319553 + (TA)n Simple_repeat Simple_repeat 1 143 0 5 1210 1061 82 0 0 chr17 81953137 81953271 -13319380 + B1_Mus1 SINE Alu 3 136 -12 5 1210 218 0 45 45 chr17 81953272 81953316 -13319335 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 5 1210 269 338 131 59 chr17 81953846 81954236 -13318415 - L3 LINE CR1 -98 4391 3974 5 1210 539 265 59 0 chr17 81954337 81954473 -13318178 + B1_Mur1 SINE Alu 1 144 -5 5 1210 297 185 0 0 chr17 81956749 81956814 -13315837 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1210 251 349 242 16 chr17 81956863 81956991 -13315660 - RSINE1 SINE B4 -7 158 2 5 1210 212 163 0 0 chr17 81957336 81957379 -13315272 + A-rich Low_complexity Low_complexity 1 43 0 5 1210 299 255 0 9 chr17 81958618 81958725 -13313926 + CT-rich Low_complexity Low_complexity 3 108 0 5 1210 252 0 0 0 chr17 81959185 81959213 -13313438 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 5 1210 236 297 13 13 chr17 81960679 81960754 -13311897 - ID4_ SINE ID -1 82 8 5 1210 656 242 54 94 chr17 81964058 81964281 -13308370 - B3A SINE B2 -2 214 1 5 1210 241 357 0 0 chr17 81964364 81964434 -13308217 + MIRb SINE MIR 118 187 -81 5 1210 23 0 0 0 chr17 81966105 81966128 -13306523 + AT_rich Low_complexity Low_complexity 1 23 0 6 1210 303 250 46 18 chr17 81967801 81967903 -13304748 + PB1D10 SINE Alu 13 112 -5 6 1210 650 160 167 7 chr17 81968890 81968997 -13303654 - Lx2B LINE L1 -20 6980 6882 6 1210 183 80 0 0 chr17 81968997 81969022 -13303629 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 6 1210 650 164 459 4 chr17 81969022 81969155 -13303496 - Lx2B LINE L1 -119 6881 6687 6 1210 1392 132 22 9 chr17 81969288 81969517 -13303134 - RLTR11A LTR ERVK 0 528 297 6 1210 1437 210 19 16 chr17 81969793 81970103 -13302548 + RLTR11A LTR ERVK 7 317 -211 6 1210 681 168 97 61 chr17 81970140 81970305 -13302346 - B2_Mm2 SINE B2 -23 172 2 6 1210 821 266 20 25 chr17 81970416 81970620 -13302031 + B3 SINE B2 1 203 -13 6 1210 2556 68 3 0 chr17 81970669 81970990 -13301661 + ORR1A2 LTR MaLR 5 326 -1 6 1210 1425 51 0 0 chr17 81971170 81971503 -13301148 + (CA)n Simple_repeat Simple_repeat 1 333 0 6 1210 241 178 0 0 chr17 81971775 81971820 -13300831 - MIR SINE MIR -139 123 79 6 1210 420 71 0 0 chr17 81972084 81972140 -13300511 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 1210 1741 229 19 180 chr17 81972193 81972921 -13299730 + RMER19C LTR ERVK 1 611 0 6 1210 4653 56 36 11 chr17 81974919 81975530 -13297121 - L1Md_F2 LINE L1 -1 6581 5956 6 1210 793 239 77 35 chr17 81976375 81976635 -13296016 + LTR37B LTR ERV1 198 468 0 6 1210 606 206 75 18 chr17 81976885 81977094 -13295557 - ORR1D1 LTR MaLR 0 374 11 6 1210 295 308 125 0 chr17 81978656 81978760 -13293891 + PB1D7 SINE Alu 1 117 -3 6 1210 193 299 98 45 chr17 81979384 81979496 -13293155 + MER5A DNA MER1_type 31 148 -41 6 1210 333 0 0 0 chr17 81980313 81980350 -13292301 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 1210 606 28 0 0 chr17 81980350 81980421 -13292230 + (GA)n Simple_repeat Simple_repeat 1 72 0 6 1210 278 369 116 7 chr17 81980461 81980745 -13291906 - L2 LINE L2 -340 3079 2765 6 1210 287 167 0 15 chr17 81981265 81981332 -13291319 + GA-rich Low_complexity Low_complexity 2 67 0 6 1210 318 26 0 0 chr17 81981866 81981905 -13290746 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1210 306 0 0 0 chr17 81981967 81982001 -13290650 + (TC)n Simple_repeat Simple_repeat 1 34 0 6 1210 414 0 0 0 chr17 81982001 81982046 -13290605 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1210 515 283 159 38 chr17 81982071 81982310 -13290341 - B4A SINE B4 -23 269 2 6 1210 304 330 57 72 chr17 81982841 81983050 -13289601 + ID_B1 SINE B4 1 206 -18 6 1210 372 43 0 0 chr17 81983071 81983117 -13289534 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 6 1210 194 317 61 0 chr17 81983696 81983778 -13288873 + MIR SINE MIR 173 259 -3 6 1210 229 330 54 20 chr17 81984542 81984693 -13287958 - MIRb SINE MIR -98 164 16 6 1210 360 0 0 0 chr17 81985785 81985825 -13286826 + (TTTTG)n Simple_repeat Simple_repeat 5 44 0 6 1210 184 379 88 29 chr17 81986159 81986295 -13286356 + L3b LINE CR1 315 458 -24 6 1210 212 77 0 25 chr17 81986802 81986842 -13285809 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 6 1210 553 365 66 0 chr17 81987683 81988015 -13284636 - L1MC LINE L1 -2170 5712 5359 6 1210 252 232 35 18 chr17 81989292 81989349 -13283302 - L2b LINE L2 -15 3360 3303 6 1210 202 366 8 52 chr17 81991252 81991384 -13281267 - L2a LINE L2 -31 3395 3249 6 1210 545 304 96 18 chr17 81991690 81991971 -13280680 + MER33 DNA MER1_type 18 320 -4 6 1210 350 214 23 35 chr17 81992697 81992784 -13279867 - MIRb SINE MIR -72 196 111 6 1210 23 0 0 0 chr17 81992981 81993004 -13279647 + AT_rich Low_complexity Low_complexity 1 23 0 6 1210 420 308 30 76 chr17 81993096 81993293 -13279358 - MIRb SINE MIR 0 268 81 6 1210 26 50 0 0 chr17 81995684 81995724 -13276927 + AT_rich Low_complexity Low_complexity 1 40 0 6 1210 635 275 51 62 chr17 81996171 81996446 -13276205 - MER20B DNA MER1_type -312 471 200 6 1210 752 66 19 0 chr17 81997392 81997498 -13275153 + (TTTC)n Simple_repeat Simple_repeat 3 110 0 6 1210 21 36 0 0 chr17 81997807 81997835 -13274816 + AT_rich Low_complexity Low_complexity 1 28 0 6 1210 424 296 15 0 chr17 81998048 81998180 -13274471 + B1F SINE Alu 1 134 -15 6 1210 196 349 75 0 chr17 81999832 81999938 -13272713 - MIRb SINE MIR -67 201 88 6 1210 285 218 109 90 chr17 82000867 82001023 -13271628 - L3 LINE CR1 -804 3685 3527 1 1210 504 0 0 0 chr17 82002632 82002688 -13269963 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1210 215 79 26 0 chr17 82003449 82003487 -13269164 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 1210 224 382 7 65 chr17 82003691 82003845 -13268806 + MIRb SINE MIR 118 262 -6 4 1210 267 54 0 0 chr17 82005466 82005503 -13267148 + (A)n Simple_repeat Simple_repeat 1 37 0 5 1210 471 63 0 0 chr17 82006817 82006880 -13265771 + (TTCC)n Simple_repeat Simple_repeat 1 63 0 6 1210 201 134 42 56 chr17 82007809 82007880 -13264771 + A-rich Low_complexity Low_complexity 4 73 0 7 1210 369 267 86 0 chr17 82009423 82009539 -13263112 + Tigger13a DNA MER2_type 150 275 -496 8 1210 741 70 0 0 chr17 82010123 82010223 -13262428 + (TA)n Simple_repeat Simple_repeat 2 101 0 9 1210 307 307 40 0 chr17 82010428 82010529 -13262122 - B1F1 SINE Alu -12 137 33 1 1210 1110 187 9 31 chr17 82012401 82012627 -13260024 + URR1B DNA MER1_type 5 225 0 1 1210 395 343 7 7 chr17 82012793 82012928 -13259723 - B3 SINE B2 -81 135 1 1 1210 279 346 62 8 chr17 82015018 82015146 -13257505 + MER20 DNA MER1_type 14 148 -71 1 1210 743 174 61 0 chr17 82015290 82015422 -13257229 + B1_Mur1 SINE Alu 2 141 -8 1 1210 188 67 33 0 chr17 82017340 82017370 -13255281 + (TAA)n Simple_repeat Simple_repeat 1 31 0 1 1210 239 242 140 21 chr17 82017597 82017690 -13254961 - RMER10A LTR ERVL -18 424 321 1 1210 1658 176 33 78 chr17 82018850 82019245 -13253406 + ORR1C1 LTR MaLR 2 378 0 1 1210 228 135 0 0 chr17 82019805 82019842 -13252809 + (A)n Simple_repeat Simple_repeat 1 37 0 1 1210 342 260 0 0 chr17 82020244 82020344 -13252307 + (TA)n Simple_repeat Simple_repeat 2 101 0 1 1210 248 0 31 0 chr17 82020366 82020398 -13252253 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 2 1210 184 353 99 16 chr17 82020891 82021012 -13251639 - MIRc SINE MIR -25 243 113 2 1210 258 105 0 0 chr17 82021583 82021621 -13251030 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1210 2398 61 27 18 chr17 82023574 82023910 -13248741 + L1_Mus2 LINE L1 6227 6565 -1 2 1210 186 133 0 0 chr17 82024493 82024523 -13248128 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1210 689 79 0 58 chr17 82024633 82024754 -13247897 - L1_Mus1 LINE L1 -1 6566 6453 2 1210 23 33 0 0 chr17 82025016 82025046 -13247605 + AT_rich Low_complexity Low_complexity 1 30 0 2 1210 285 241 12 35 chr17 82025107 82025193 -13247458 + CT-rich Low_complexity Low_complexity 3 86 0 2 1210 440 274 186 14 chr17 82026338 82026553 -13246098 + Lx8 LINE L1 7129 7380 -93 2 1210 222 122 40 20 chr17 82026609 82026659 -13245992 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 1210 939 142 6 11 chr17 82026868 82027046 -13245605 + GA-rich Low_complexity Low_complexity 4 180 0 3 1210 187 316 92 31 chr17 82027210 82027308 -13245343 - MIR SINE MIR -157 105 2 3 1210 227 143 41 0 chr17 82027997 82028046 -13244605 + CT-rich Low_complexity Low_complexity 1 51 0 3 1210 405 0 0 0 chr17 82028116 82028161 -13244490 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1210 249 236 264 0 chr17 82028188 82028260 -13244391 - RSINE1 SINE B4 -66 99 9 3 1210 27 0 0 0 chr17 82029373 82029400 -13243251 + AT_rich Low_complexity Low_complexity 1 27 0 3 1210 728 177 14 0 chr17 82029857 82029998 -13242653 + URR1B DNA MER1_type 83 225 0 3 1210 23 0 0 0 chr17 82030876 82030899 -13241752 + AT_rich Low_complexity Low_complexity 1 23 0 3 1210 605 14 14 0 chr17 82030952 82031026 -13241625 + (TC)n Simple_repeat Simple_repeat 2 76 0 3 1210 708 45 0 0 chr17 82031385 82031473 -13241178 + (GA)n Simple_repeat Simple_repeat 2 89 0 3 1210 460 197 76 8 chr17 82031788 82031906 -13240745 - B1F SINE Alu -9 140 15 4 1210 380 287 42 34 chr17 82032463 82032582 -13240069 + B4A SINE B4 1 120 -172 4 1210 474 18 0 0 chr17 82033399 82033454 -13239197 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 1210 2217 162 110 14 chr17 82033460 82033942 -13238709 + RLTR11A LTR ERVK 1 528 0 4 1210 192 217 0 0 chr17 82033942 82033988 -13238663 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1210 250 183 14 14 chr17 82034323 82034395 -13238256 + (TATATG)n Simple_repeat Simple_repeat 1 72 0 4 1210 2831 176 8 4 chr17 82034570 82035095 -13237556 + Lx LINE L1 6124 6650 -4 4 1210 541 128 20 0 chr17 82035095 82035197 -13237454 + (GA)n Simple_repeat Simple_repeat 1 104 0 4 1210 195 339 48 80 chr17 82036037 82036162 -13236489 + L2c LINE L2 3266 3386 -1 4 1210 231 316 0 12 chr17 82036490 82036570 -13236081 + CT-rich Low_complexity Low_complexity 1 79 0 4 1210 423 302 0 17 chr17 82037110 82037228 -13235423 + PB1D10 SINE Alu 1 116 -1 5 1210 290 91 0 18 chr17 82037569 82037625 -13235026 + (CAAAAA)n Simple_repeat Simple_repeat 5 59 0 5 1210 504 360 59 11 chr17 82038632 82038902 -13233749 + B4A SINE B4 4 286 -6 5 1210 396 0 0 0 chr17 82038912 82038956 -13233695 + (TC)n Simple_repeat Simple_repeat 2 45 0 5 1210 243 0 0 0 chr17 82038957 82038984 -13233667 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1210 258 116 0 0 chr17 82039021 82039064 -13233587 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 5 1210 748 100 8 8 chr17 82039125 82039246 -13233405 + (GGAA)n Simple_repeat Simple_repeat 2 122 0 5 1210 321 275 72 18 chr17 82040401 82040512 -13232139 + ID_B1 SINE B4 84 200 -24 5 1210 802 306 47 11 chr17 82042713 82042991 -13229660 + B4A SINE B4 2 289 -3 5 1210 474 180 68 38 chr17 82044145 82044278 -13228373 - Lx4B LINE L1 -398 6660 6524 5 1210 1421 212 81 52 chr17 82044459 82044842 -13227809 + Lx5 LINE L1 6648 7041 -9 6 1210 423 351 0 155 chr17 82044862 82045088 -13227563 + B4 SINE B4 90 280 -12 6 1210 261 83 0 0 chr17 82045090 82045126 -13227525 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 1210 405 39 0 0 chr17 82047079 82047130 -13225521 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 151 197 379 79 51 chr17 82051002 82051180 -13221471 - L2a LINE L2 -287 3139 2957 6 1211 207 75 75 0 chr17 82051930 82051970 -13220681 + (TA)n Simple_repeat Simple_repeat 2 44 0 6 1211 268 279 52 52 chr17 82054238 82054374 -13218277 + L2a LINE L2 3217 3352 -74 6 1211 185 311 134 57 chr17 82054355 82054512 -13218139 + L2a LINE L2 3257 3425 -1 6 1211 450 0 0 0 chr17 82054863 82054913 -13217738 + (TTA)n Simple_repeat Simple_repeat 2 51 0 6 1211 573 15 0 0 chr17 82055240 82055306 -13217345 + (CA)n Simple_repeat Simple_repeat 2 67 0 6 1211 363 73 0 0 chr17 82055307 82055362 -13217289 + (CAGA)n Simple_repeat Simple_repeat 2 56 0 6 1211 235 26 50 25 chr17 82056027 82056067 -13216584 + (CAAAA)n Simple_repeat Simple_repeat 4 44 0 7 1211 473 302 127 28 chr17 82056696 82056948 -13215703 + B4 SINE B4 2 278 -14 7 1211 270 116 0 0 chr17 82058216 82058259 -13214392 + (TA)n Simple_repeat Simple_repeat 2 44 0 7 1211 1731 21 0 0 chr17 82058383 82058577 -13214074 + L1Md_T LINE L1 5393 5586 -297 7 1211 8558 56 0 0 chr17 82058577 82059573 -13213078 + L1Md_T LINE L1 5587 6582 0 7 1211 489 34 0 0 chr17 82059980 82060039 -13212612 + (CCAA)n Simple_repeat Simple_repeat 2 60 0 7 1211 809 92 8 0 chr17 82060149 82060269 -13212382 + (TCCA)n Simple_repeat Simple_repeat 1 121 0 7 1211 186 43 0 0 chr17 82061168 82061191 -13211460 + (TTA)n Simple_repeat Simple_repeat 2 24 0 7 1211 690 324 65 7 chr17 82061443 82061735 -13210916 + MER58B DNA MER1_type 1 309 -32 7 1211 983 157 0 6 chr17 82061760 82061940 -13210711 + (TA)n Simple_repeat Simple_repeat 2 180 0 7 1211 210 162 0 0 chr17 82062160 82062197 -13210454 + (TTA)n Simple_repeat Simple_repeat 3 39 0 7 1211 315 0 0 0 chr17 82062565 82062600 -13210051 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 1211 288 283 30 20 chr17 82063052 82063153 -13209498 + PB1D9 SINE Alu 12 113 -7 8 1211 309 238 0 0 chr17 82063715 82063795 -13208856 + (TATATG)n Simple_repeat Simple_repeat 4 83 0 8 1211 417 141 0 0 chr17 82063779 82063850 -13208801 + (CA)n Simple_repeat Simple_repeat 2 72 0 8 1211 699 142 13 7 chr17 82065601 82065750 -13206901 + GA-rich Low_complexity Low_complexity 1 150 0 8 1211 213 39 0 0 chr17 82067432 82067458 -13205193 + (TTCC)n Simple_repeat Simple_repeat 2 27 0 8 1211 529 76 9 37 chr17 82067669 82067778 -13204873 + (TG)n Simple_repeat Simple_repeat 2 107 0 8 1211 363 96 0 0 chr17 82068408 82068460 -13204191 + (TG)n Simple_repeat Simple_repeat 2 53 0 8 1211 378 42 0 0 chr17 82069182 82069230 -13203421 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 1211 230 197 0 43 chr17 82069506 82069575 -13203076 + (CGG)n Simple_repeat Simple_repeat 1 66 0 8 1211 26 0 0 0 chr17 82069582 82069608 -13203043 + GC_rich Low_complexity Low_complexity 1 26 0 9 1211 189 0 0 0 chr17 82069648 82069669 -13202982 + (CCCG)n Simple_repeat Simple_repeat 4 24 0 9 1211 285 51 0 0 chr17 82070367 82070406 -13202245 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 9 1211 316 315 28 9 chr17 82070987 82071096 -13201555 + MER5B DNA MER1_type 5 115 -63 9 1211 1086 135 0 0 chr17 82073745 82073923 -13198728 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 9 1211 225 0 0 0 chr17 82073923 82073948 -13198703 + (GGAA)n Simple_repeat Simple_repeat 1 25 0 9 1211 201 297 13 39 chr17 82074935 82075012 -13197639 - MIRc SINE MIR -65 203 129 9 1211 234 0 0 0 chr17 82076000 82076026 -13196625 + (T)n Simple_repeat Simple_repeat 1 26 0 9 1211 369 0 0 0 chr17 82076182 82076223 -13196428 + (TG)n Simple_repeat Simple_repeat 2 42 0 9 1211 358 319 34 41 chr17 82076224 82076371 -13196280 - RSINE1 SINE B4 -18 147 2 9 1211 185 353 71 0 chr17 82076389 82076474 -13196177 - MIRm SINE MIR -6 270 180 1 1211 367 221 0 0 chr17 82078221 82078298 -13194353 - MER97c DNA MER1_type? -957 133 57 1 1211 21 36 0 0 chr17 82078809 82078837 -13193814 + AT_rich Low_complexity Low_complexity 1 28 0 1 1211 1174 232 151 19 chr17 82079001 82079326 -13193325 - ORR1D2 LTR MaLR -2 368 1 1 1211 416 264 21 85 chr17 82080074 82080215 -13192436 + ID_B1 SINE B4 93 224 0 1 1211 216 0 0 0 chr17 82080856 82080880 -13191771 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1211 643 337 45 65 chr17 82081242 82081645 -13191006 + MER20B DNA MER1_type 10 404 -379 1 1211 36301 34 0 0 chr17 82083187 82088826 -13183825 + L1Md_T LINE L1 1 5589 -297 1 1211 9570 7 0 0 chr17 82088826 82089822 -13182829 + L1Md_T LINE L1 5590 6585 0 1 1211 495 0 0 0 chr17 82090957 82091012 -13181639 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 1211 324 48 0 0 chr17 82091012 82091053 -13181598 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1211 580 287 20 0 chr17 82091053 82091203 -13181448 - B3A SINE B2 -44 154 2 1 1211 3399 46 0 0 chr17 82091362 82091751 -13180900 - L1Md_T LINE L1 0 6582 6194 1 1211 5672 15 0 0 chr17 82091753 82092696 -13179955 + L1Md_T LINE L1 5255 6197 -385 1 1211 477 0 0 0 chr17 82092911 82092964 -13179687 + (TC)n Simple_repeat Simple_repeat 1 53 0 1 1211 210 37 0 0 chr17 82092964 82092990 -13179661 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1211 1206 75 0 0 chr17 82093111 82093258 -13179393 + B1_Mus1 SINE Alu 2 148 0 1 1211 210 154 0 0 chr17 82093258 82093297 -13179354 + A-rich Low_complexity Low_complexity 1 39 0 1 1211 25 51 0 0 chr17 82093461 82093500 -13179151 + AT_rich Low_complexity Low_complexity 1 39 0 1 1211 357 239 15 0 chr17 82095113 82095180 -13177471 - ID4 SINE ID -4 79 12 1 1211 584 62 0 12 chr17 82095637 82095719 -13176932 + (TTTTC)n Simple_repeat Simple_repeat 5 85 0 1 1211 1019 83 30 0 chr17 82095719 82095851 -13176800 - B1_Mus1 SINE Alu -12 136 1 1 1211 531 232 83 10 chr17 82096743 82096935 -13175716 - Charlie1b DNA MER1_type -22 501 296 1 1211 453 366 4 22 chr17 82097094 82097320 -13175331 - Charlie1b DNA MER1_type -262 261 40 1 1211 282 74 56 0 chr17 82097339 82097393 -13175258 + (CAA)n Simple_repeat Simple_repeat 2 58 0 1 1211 23 68 0 0 chr17 82097640 82097684 -13174967 + AT_rich Low_complexity Low_complexity 1 44 0 1 1211 1074 129 0 0 chr17 82100584 82100795 -13171856 + (CA)n Simple_repeat Simple_repeat 1 211 0 1 1211 360 0 0 0 chr17 82101056 82101096 -13171555 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1211 477 255 77 65 chr17 82101271 82101439 -13171212 - B3A SINE B2 0 198 29 1 1211 576 81 0 0 chr17 82101911 82101998 -13170653 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 1 1211 241 375 52 10 chr17 82102010 82102107 -13170544 - PB1D10 SINE Alu -16 101 1 1 1211 351 0 0 0 chr17 82103353 82103392 -13169259 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1211 555 53 0 0 chr17 82103393 82103468 -13169183 + (GA)n Simple_repeat Simple_repeat 2 76 0 1 1211 576 286 64 64 chr17 82103604 82103839 -13168812 + B4 SINE B4 2 236 -56 1 1211 696 24 0 0 chr17 82104527 82104609 -13168042 + (TC)n Simple_repeat Simple_repeat 1 82 0 1 1211 354 280 96 29 chr17 82104997 82105133 -13167518 - RSINE1 SINE B4 -18 147 3 1 1211 562 154 26 0 chr17 82106360 82106455 -13166196 + GA-rich Low_complexity Low_complexity 1 98 0 1 1211 198 0 0 0 chr17 82106455 82106477 -13166174 + (CAGAGA)n Simple_repeat Simple_repeat 1 22 0 1 1211 562 154 26 0 chr17 82106477 82106498 -13166153 + polypurine Low_complexity Low_complexity 99 119 0 1 1211 494 58 46 0 chr17 82106639 82106726 -13165925 + (TA)n Simple_repeat Simple_repeat 2 92 0 1 1211 918 229 47 33 chr17 82108418 82108630 -13164021 + B3 SINE B2 1 215 -1 1 1211 181 438 0 0 chr17 82108929 82109018 -13163633 + L2b LINE L2 3093 3181 -194 1 1211 441 0 0 0 chr17 82112054 82112103 -13160548 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1211 366 42 0 0 chr17 82112281 82112329 -13160322 + (TTA)n Simple_repeat Simple_repeat 2 49 0 1 1211 272 262 10 0 chr17 82114412 82114515 -13158136 + (CA)n Simple_repeat Simple_repeat 2 105 0 1 1211 530 247 6 0 chr17 82114528 82114706 -13157945 + (CA)n Simple_repeat Simple_repeat 1 179 0 1 1211 369 0 0 0 chr17 82114924 82114965 -13157686 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1211 1622 52 0 0 chr17 82115559 82115752 -13156899 + B2_Mm1t SINE B2 1 193 0 1 1211 33696 36 0 0 chr17 82115756 82121157 -13151494 + L1Md_T LINE L1 92 5589 -297 1 1211 9056 4 0 0 chr17 82121157 82122187 -13150464 + L1Md_T LINE L1 5590 6585 0 1 1211 1407 214 117 0 chr17 82122894 82123296 -13149355 - Lx9 LINE L1 -1 7643 7195 1 1211 264 172 0 0 chr17 82124763 82124821 -13147830 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 1211 1348 287 75 5 chr17 82124839 82125280 -13147371 + Lx8 LINE L1 6864 7335 -138 1 1211 29 28 0 0 chr17 82125417 82125453 -13147198 + AT_rich Low_complexity Low_complexity 1 36 0 1 1211 1617 153 5 133 chr17 82125651 82126028 -13146623 + ORR1A4 LTR MaLR 1 329 0 1 1211 185 329 24 12 chr17 82126458 82126541 -13146110 - L2 LINE L2 -586 2833 2750 1 1211 3878 181 9 16 chr17 82126560 82127314 -13145337 - RMER6A LTR ERVK -4 752 4 1 1211 456 135 18 9 chr17 82127359 82127471 -13145180 + (TCTA)n Simple_repeat Simple_repeat 2 114 0 1 1211 261 264 69 0 chr17 82127955 82128042 -13144609 + MER94 DNA AcHobo 2 94 -40 1 1211 212 355 160 33 chr17 82128082 82128382 -13144269 + L2 LINE L2 2738 3075 -344 1 1211 657 139 0 58 chr17 82129986 82130177 -13142474 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1211 298 279 103 124 chr17 82130177 82130467 -13142184 - B4 SINE B4 0 292 9 1 1211 378 132 0 0 chr17 82130669 82130745 -13141906 + (TC)n Simple_repeat Simple_repeat 1 76 0 1 1211 197 65 32 0 chr17 82130877 82130908 -13141743 + (GGA)n Simple_repeat Simple_repeat 2 33 0 1 1211 593 315 40 10 chr17 82132279 82132481 -13140170 + B3 SINE B2 5 212 -4 1 1211 23 0 0 0 chr17 82133173 82133196 -13139455 + AT_rich Low_complexity Low_complexity 1 23 0 1 1211 271 299 32 3 chr17 82133633 82133726 -13138925 - PB1D9 SINE Alu -25 95 1 1 1211 350 280 116 43 chr17 82133812 82133976 -13138675 - MER5B DNA MER1_type 0 178 3 1 1211 240 204 0 0 chr17 82134810 82134854 -13137797 - MTD LTR MaLR -8 411 368 1 1211 1565 222 67 16 chr17 82134910 82135281 -13137370 - MTD LTR MaLR -28 391 2 1 1211 380 281 5 5 chr17 82135863 82136071 -13136580 + CT-rich Low_complexity Low_complexity 1 208 0 1 1211 330 26 0 0 chr17 82138151 82138190 -13134461 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 1 1211 344 250 114 61 chr17 82138871 82138893 -13133758 + B1_Mur1 SINE Alu 10 148 -1 1 1211 482 198 100 36 chr17 82138893 82139003 -13133648 + ID_B1 SINE B4 108 224 0 1 1211 252 188 31 15 chr17 82139176 82139241 -13133410 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 1211 441 36 0 0 chr17 82140600 82140655 -13131996 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 1211 233 353 30 8 chr17 82140713 82140847 -13131804 + L2c LINE L2 3209 3345 -42 1 1211 1605 141 11 0 chr17 82141287 82141556 -13131095 - Lx2 LINE L1 -654 6343 6072 1 1211 3862 111 72 0 chr17 82141556 82142152 -13130499 + Lx2 LINE L1 6358 6996 -1 1 1211 23 0 0 0 chr17 82142246 82142269 -13130382 + AT_rich Low_complexity Low_complexity 1 23 0 1 1211 460 225 15 8 chr17 82142713 82142843 -13129808 - L1MB8 LINE L1 -9 7029 6899 1 1211 399 170 0 0 chr17 82142925 82143025 -13129626 + (CA)n Simple_repeat Simple_repeat 1 100 0 1 1211 354 240 20 0 chr17 82143059 82143159 -13129492 - L1MB8 LINE L1 -566 6472 6371 1 1211 274 174 292 34 chr17 82143166 82143255 -13129396 - ID_B1 SINE B4 -3 221 110 1 1211 621 275 61 28 chr17 82143415 82143879 -13128772 - L1MB8 LINE L1 -746 6260 5791 1 1211 599 97 26 9 chr17 82143882 82143997 -13128654 + MusHAL1 LINE L1 616 732 -2622 1 1211 3710 110 28 13 chr17 82144027 82144703 -13127948 + Lx2 LINE L1 5528 6214 -783 1 1211 3237 161 56 58 chr17 82144703 82145344 -13127307 - RLTR26 LTR ERVK 0 642 3 1 1211 5136 138 4 0 chr17 82145344 82146132 -13126519 + Lx2 LINE L1 6207 6997 0 1 1211 419 235 184 11 chr17 82146256 82146441 -13126210 - L1MB8 LINE L1 -3678 3656 3440 1 1211 200 128 0 25 chr17 82146669 82146709 -13125942 + A-rich Low_complexity Low_complexity 2 40 0 1 1211 317 273 66 30 chr17 82146768 82146934 -13125717 - Lx6 LINE L1 -2 7458 7287 1 1211 397 358 32 32 chr17 82147287 82147443 -13125208 - RSINE1 SINE B4 -6 159 4 1 1211 571 329 136 22 chr17 82147559 82148007 -13124644 - L1MB8 LINE L1 -4686 2322 1824 1 1211 756 42 0 0 chr17 82148026 82148122 -13124529 + (TG)n Simple_repeat Simple_repeat 1 96 0 1 1211 433 302 23 23 chr17 82148147 82148276 -13124375 - RSINE1 SINE B4 -29 136 8 1 1211 339 307 130 18 chr17 82148276 82148445 -13124206 - L1MB8 LINE L1 -5539 1795 1608 1 1211 246 292 79 14 chr17 82149057 82149196 -13123455 - L1MB8 LINE L1 -7077 257 110 1 1211 25 0 0 0 chr17 82150097 82150122 -13122529 + AT_rich Low_complexity Low_complexity 1 25 0 1 1211 1600 82 0 9 chr17 82150863 82151085 -13121566 - L1Md_F2 LINE L1 -15 6567 6348 1 1211 206 32 32 0 chr17 82151137 82151168 -13121483 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 1 1211 782 340 56 31 chr17 82152188 82152507 -13120144 - LTR40b LTR ERVL 0 462 136 1 1211 241 244 0 0 chr17 82152565 82152606 -13120045 - B1F2 SINE Alu -108 41 1 1 1211 377 332 50 36 chr17 82152606 82152794 -13119857 - LTR40b LTR ERVL -271 191 1 1 1211 544 316 46 29 chr17 82153306 82153880 -13118771 - L1MD1 LINE L1 -104 6138 5525 1 1211 269 226 46 28 chr17 82154362 82154471 -13118180 - L1MD1 LINE L1 -2566 3580 3470 1 1211 364 278 58 74 chr17 82154524 82154551 -13118100 - L1MDa LINE L1 -3543 2994 2971 1 1211 342 0 0 0 chr17 82154551 82154589 -13118062 + (TTTTG)n Simple_repeat Simple_repeat 4 41 0 1 1211 364 278 58 74 chr17 82154589 82154751 -13117900 - L1MDa LINE L1 -3567 2970 2808 1 1211 225 330 17 0 chr17 82154877 82154992 -13117659 - L1MDa LINE L1 -4963 1670 1554 1 1211 352 171 9 35 chr17 82155064 82155179 -13117472 + CT-rich Low_complexity Low_complexity 1 112 0 1 1211 476 32 16 0 chr17 82155179 82155241 -13117410 + (TTTC)n Simple_repeat Simple_repeat 4 66 0 1 1211 423 0 0 0 chr17 82155385 82155432 -13117219 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1 1211 439 299 92 58 chr17 82155453 82155827 -13116824 - L1MDa LINE L1 -4941 1586 1217 1 1211 799 62 0 0 chr17 82155830 82155943 -13116708 + L1_Mus2 LINE L1 6427 6539 -27 1 1211 1123 56 0 14 chr17 82155947 82156091 -13116560 + B1_Mus2 SINE Alu 1 142 -5 1 1211 1166 106 0 11 chr17 82156092 82156274 -13116377 + (GAA)n Simple_repeat Simple_repeat 1 180 0 1 1211 245 140 20 0 chr17 82156276 82156293 -13116358 + polypurine Low_complexity Low_complexity 4 20 0 1 1211 1536 42 11 0 chr17 82156293 82156482 -13116169 + B2_Mm1a SINE B2 1 191 -2 2 1211 245 140 20 0 chr17 82156482 82156514 -13116137 + polypurine Low_complexity Low_complexity 21 52 0 2 1211 30 0 0 0 chr17 82156518 82156548 -13116103 + AT_rich Low_complexity Low_complexity 1 30 0 2 1211 307 316 109 27 chr17 82156555 82156812 -13115839 - L1MDa LINE L1 -5458 1175 898 1 1211 4787 34 0 17 chr17 82157013 82157591 -13115060 - L1Md_F2 LINE L1 -2 6580 6013 2 1211 189 0 0 0 chr17 82158131 82158152 -13114499 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1211 888 224 47 0 chr17 82158166 82158358 -13114293 + B3 SINE B2 5 205 -11 2 1211 22 0 0 0 chr17 82158653 82158675 -13113976 + AT_rich Low_complexity Low_complexity 1 22 0 2 1211 376 72 58 23 chr17 82158896 82158982 -13113669 + A-rich Low_complexity Low_complexity 2 90 0 2 1211 2575 168 82 21 chr17 82159067 82159553 -13113098 + RLTR20D LTR ERVK 53 568 0 2 1211 790 217 0 0 chr17 82159965 82160108 -13112543 - B1_Mur4 SINE Alu -7 143 1 2 1211 315 248 65 94 chr17 82160288 82160426 -13112225 - L1M2 LINE L1 -1556 4587 4454 2 1211 333 325 95 26 chr17 82160438 82160817 -13111834 - L1MA6 LINE L1 -245 7015 6611 2 1211 389 269 92 35 chr17 82160828 82161001 -13111650 - L1MA6 LINE L1 -855 6248 6066 2 1211 841 273 43 40 chr17 82161063 82161509 -13111142 - L1MA6 LINE L1 -1286 5817 5371 2 1211 455 0 18 0 chr17 82161509 82161564 -13111087 + (CATA)n Simple_repeat Simple_repeat 4 59 0 2 1211 261 0 0 0 chr17 82161564 82161592 -13111059 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 2 1211 963 264 95 15 chr17 82161592 82161865 -13110786 - ORR1D2 LTR MaLR -57 313 19 2 1211 5069 172 31 26 chr17 82161871 82162893 -13109758 - Lx3C LINE L1 -2 6974 5948 2 1211 1204 142 39 5 chr17 82162921 82163127 -13109524 - Lx3B LINE L1 -4 6969 6757 2 1211 486 306 114 50 chr17 82164442 82164803 -13107848 - L1MA6 LINE L1 -6640 390 7 2 1211 1192 271 66 31 chr17 82164849 82165199 -13107452 - ORR1D2 LTR MaLR -8 362 1 2 1211 685 139 57 0 chr17 82165409 82165531 -13107120 - Lx9 LINE L1 -561 7083 6955 2 1211 1131 88 0 0 chr17 82165715 82165863 -13106788 + B1_Mus1 SINE Alu 1 148 0 2 1211 786 125 14 7 chr17 82165874 82165966 -13106685 + (GGA)n Simple_repeat Simple_repeat 3 94 0 2 1211 960 111 0 0 chr17 82165966 82166146 -13106505 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 1211 786 125 14 7 chr17 82166146 82166198 -13106453 + (GGA)n Simple_repeat Simple_repeat 2 55 0 2 1211 24 0 0 0 chr17 82167410 82167434 -13105217 + AT_rich Low_complexity Low_complexity 1 24 0 2 1211 1091 303 25 48 chr17 82168320 82168798 -13103853 + Lx9 LINE L1 6325 6791 -853 2 1211 1351 204 187 23 chr17 82168811 82169158 -13103493 + MTC LTR MaLR 18 421 0 2 1211 1262 319 47 41 chr17 82169158 82169885 -13102766 + Lx9 LINE L1 6785 7515 -129 2 1211 200 178 81 14 chr17 82169886 82169960 -13102691 + (CATA)n Simple_repeat Simple_repeat 4 82 0 2 1211 25 0 0 0 chr17 82169961 82169986 -13102665 + AT_rich Low_complexity Low_complexity 1 25 0 2 1211 1814 171 91 13 chr17 82169994 82170390 -13102261 + RMER10A LTR ERVL 10 436 -6 2 1211 218 208 36 45 chr17 82170392 82170503 -13102148 + (TTATA)n Simple_repeat Simple_repeat 1 110 0 2 1211 259 229 60 12 chr17 82170478 82170646 -13102005 + (TA)n Simple_repeat Simple_repeat 2 177 0 2 1211 327 279 180 0 chr17 82170656 82170767 -13101884 + B3 SINE B2 38 168 -48 2 1211 423 78 0 0 chr17 82170771 82170835 -13101816 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 1211 198 191 0 0 chr17 82171017 82171059 -13101592 + (CAGA)n Simple_repeat Simple_repeat 3 44 0 2 1211 403 267 129 36 chr17 82171284 82171478 -13101173 + B3 SINE B2 3 214 -2 2 1211 1523 217 89 59 chr17 82172883 82172954 -13099697 - RLTR11A LTR ERVK -2 526 459 2 1211 459 0 0 0 chr17 82172954 82173005 -13099646 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1211 1523 217 89 59 chr17 82173005 82173438 -13099213 - RLTR11A LTR ERVK -70 458 8 2 1211 945 50 0 0 chr17 82173530 82173649 -13099002 + (TC)n Simple_repeat Simple_repeat 2 120 0 2 1211 21 0 0 0 chr17 82173673 82173694 -13098957 + AT_rich Low_complexity Low_complexity 1 21 0 2 1211 508 250 45 8 chr17 82173904 82174037 -13098614 - B1_Mur1 SINE Alu 0 149 12 2 1211 437 286 57 2 chr17 82174144 82174394 -13098257 - L1_Mur3 LINE L1 -665 5518 5254 2 1211 337 298 114 16 chr17 82174465 82174649 -13098002 - L1_Mur3 LINE L1 -970 5173 4972 2 1211 233 232 14 0 chr17 82175098 82175167 -13097484 + GA-rich Low_complexity Low_complexity 4 73 0 2 1211 1192 227 91 24 chr17 82176428 82176801 -13095850 - MT2A LTR ERVL -75 458 1 2 1211 25 31 0 0 chr17 82177373 82177405 -13095246 + AT_rich Low_complexity Low_complexity 1 32 0 2 1211 324 148 0 0 chr17 82178038 82178099 -13094552 + (TCTG)n Simple_repeat Simple_repeat 2 62 0 2 1211 291 312 0 103 chr17 82179405 82179512 -13093139 + ID_B1 SINE B4 101 196 -28 2 1211 27 49 0 0 chr17 82179612 82179653 -13092998 + AT_rich Low_complexity Low_complexity 1 41 0 2 1211 459 0 0 0 chr17 82180248 82180299 -13092352 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 1211 23 68 0 0 chr17 82180432 82180476 -13092175 + AT_rich Low_complexity Low_complexity 1 44 0 2 1211 314 279 44 44 chr17 82181978 82182113 -13090538 - HAL1-3A_ME LINE L1 -749 2109 1975 2 151 546 204 17 0 chr17 82182119 82182179 -13090472 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 1212 654 49 0 0 chr17 82182179 82182261 -13090390 + (TA)n Simple_repeat Simple_repeat 2 83 0 2 1212 546 204 17 0 chr17 82182261 82182376 -13090275 + (TG)n Simple_repeat Simple_repeat 1 116 0 2 1212 453 264 84 89 chr17 82182633 82182870 -13089781 - Lx8 LINE L1 -323 7150 6915 2 1212 1035 25 0 0 chr17 82183155 82183277 -13089374 + (TTC)n Simple_repeat Simple_repeat 2 123 0 2 1212 872 259 75 29 chr17 82183296 82183602 -13089049 - Lx8 LINE L1 -267 7206 6887 2 1212 1103 184 38 5 chr17 82183614 82183827 -13088824 + URR1A DNA MER1_type 7 226 0 2 1212 346 260 196 14 chr17 82183847 82183995 -13088656 - Lx8 LINE L1 -614 6859 6685 2 1212 335 254 82 61 chr17 82184058 82184208 -13088443 - RLTR9E LTR ERVK -33 404 236 2 1212 274 247 156 0 chr17 82184251 82184328 -13088323 - RLTR9E LTR ERVK -279 89 1 2 1212 1028 271 120 83 chr17 82184328 82184903 -13087748 - Lx8 LINE L1 -783 6690 6095 2 1212 479 326 55 35 chr17 82184909 82185109 -13087542 - B4A SINE B4 -86 206 3 2 1212 199 267 33 16 chr17 82186703 82186764 -13085887 - MER5B DNA MER1_type -34 144 83 2 1212 594 0 0 0 chr17 82189630 82189696 -13082955 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 1212 584 189 36 57 chr17 82190204 82190344 -13082307 - RLTR26 LTR ERVK 0 642 506 2 1212 322 333 15 65 chr17 82190558 82190821 -13081830 - Lx9 LINE L1 -217 7427 7178 2 1212 477 0 0 0 chr17 82190843 82190896 -13081755 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1212 387 0 0 0 chr17 82192493 82192536 -13080115 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1212 293 354 10 0 chr17 82192550 82192646 -13080005 - B3A SINE B2 -84 114 18 2 1212 23 33 0 0 chr17 82192815 82192845 -13079806 + AT_rich Low_complexity Low_complexity 1 30 0 2 1212 6778 231 60 29 chr17 82192887 82192994 -13079657 - Lx7 LINE L1 -215 7481 7362 2 1212 183 42 0 0 chr17 82192994 82193018 -13079633 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 1212 6778 226 47 23 chr17 82193018 82195181 -13077470 - Lx7 LINE L1 -335 7361 5149 2 1212 1978 234 14 14 chr17 82195212 82195714 -13076937 - Lx9 LINE L1 -186 7458 6957 2 1212 1153 199 139 8 chr17 82195721 82195976 -13076675 + Lx9 LINE L1 7238 7520 -124 2 1212 492 111 0 0 chr17 82195976 82196057 -13076594 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 2 1212 1153 199 139 8 chr17 82196057 82196160 -13076491 + Lx9 LINE L1 7521 7643 -1 2 1212 472 307 26 81 chr17 82198054 82198288 -13074363 + ORR1E LTR MaLR 2 222 -137 2 1212 459 279 97 32 chr17 82198695 82198880 -13073771 + B3A SINE B2 2 198 0 2 1212 249 342 49 37 chr17 82199192 82199311 -13073340 + Lx8 LINE L1 7216 7331 -142 2 1212 234 62 0 0 chr17 82199311 82199343 -13073308 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1212 249 342 49 37 chr17 82199343 82199387 -13073264 + Lx8 LINE L1 7332 7381 -92 2 1212 653 206 73 7 chr17 82199469 82199593 -13073058 + B1_Mur4 SINE Alu 5 138 -12 2 1212 642 60 0 0 chr17 82199593 82199676 -13072975 + (CAAAA)n Simple_repeat Simple_repeat 3 85 0 2 1212 653 206 73 7 chr17 82199676 82199688 -13072963 + B1_Mur4 SINE Alu 139 150 0 2 1212 228 86 0 0 chr17 82199803 82199838 -13072813 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 2 1212 2666 131 33 5 chr17 82199894 82200315 -13072336 - RLTR10C LTR ERVK -3 433 1 2 1212 2058 184 50 13 chr17 82200315 82200777 -13071874 - MMERVK10C-int LTR ERVK 0 7513 7035 2 1212 13653 67 0 4 chr17 82200773 82202577 -13070074 - MMERVK10C-int LTR ERVK -864 6717 4921 2 1212 815 81 0 0 chr17 82202574 82202685 -13069966 - MMERVK10C-int LTR ERVK -2848 4733 4623 2 1212 1418 201 114 13 chr17 82203508 82203997 -13068654 - RMER16-int LTR ERVK -5469 668 192 2 1212 13920 90 37 34 chr17 82203997 82206142 -13066509 - MMERVK10C-int LTR ERVK -5426 2155 3 2 1212 2741 123 33 5 chr17 82206142 82206565 -13066086 - RLTR10C LTR ERVK -1 435 1 2 1212 377 294 17 111 chr17 82206754 82206934 -13065717 + RSINE1 SINE B4 3 165 0 2 1212 746 355 90 62 chr17 82206956 82207566 -13065085 + BLACKJACK DNA AcHobo 40 666 -2278 2 1212 233 327 48 19 chr17 82207711 82207814 -13064837 + BLACKJACK DNA AcHobo 887 992 -1952 2 1212 11117 28 0 0 chr17 82208592 82209972 -13062679 - L1Md_T LINE L1 -990 4893 3514 2 1212 6059 14 0 0 chr17 82209960 82210683 -13061968 + L1Md_T LINE L1 4864 5586 -297 2 1212 9043 5 0 0 chr17 82210683 82211679 -13060972 + L1Md_T LINE L1 5587 6582 0 2 1212 240 282 167 47 chr17 82211682 82212155 -13060496 + BLACKJACK DNA AcHobo 2402 2931 -13 2 1212 412 97 0 0 chr17 82212222 82212284 -13060367 - L1_Mm LINE L1 -3249 2634 2573 2 1212 10391 64 51 0 chr17 82212287 82213763 -13058888 + L1Md_F2 LINE L1 4036 5586 -297 2 1212 7743 57 14 5 chr17 82213763 82214750 -13057901 + L1Md_F2 LINE L1 5587 6582 0 2 1212 693 151 0 0 chr17 82214750 82214869 -13057782 + GA-rich Low_complexity Low_complexity 1 119 0 2 1212 645 258 21 100 chr17 82215724 82215965 -13056686 - ID_B1 SINE B4 -2 222 1 2 1212 416 287 25 34 chr17 82215996 82216115 -13056536 - B1F2 SINE Alu -2 147 30 2 1212 973 58 50 43 chr17 82216144 82216305 -13056346 + L1Md_F2 LINE L1 6409 6570 -12 2 1212 183 247 110 12 chr17 82216307 82216389 -13056262 + MIR SINE MIR 97 186 -76 2 1212 225 273 0 0 chr17 82217118 82217184 -13055467 + T-rich Low_complexity Low_complexity 1 66 0 2 1212 9369 96 6 10 chr17 82217208 82218299 -13054352 - Lx3_Mus LINE L1 -16 6993 5907 2 1212 222 37 0 0 chr17 82218299 82218326 -13054325 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 2 1212 18047 83 16 7 chr17 82218326 82221065 -13051586 - Lx3_Mus LINE L1 -1103 5906 3146 2 1212 21 71 0 0 chr17 82221230 82221272 -13051379 + AT_rich Low_complexity Low_complexity 1 42 0 2 1212 495 48 0 0 chr17 82221301 82221363 -13051288 + (TC)n Simple_repeat Simple_repeat 2 63 0 2 1212 22 35 0 0 chr17 82222217 82222246 -13050405 + AT_rich Low_complexity Low_complexity 1 29 0 2 1212 255 349 28 19 chr17 82222738 82222846 -13049805 + MLT1A1 LTR MaLR 235 343 -65 2 1212 21 89 0 0 chr17 82223358 82223414 -13049237 + AT_rich Low_complexity Low_complexity 1 56 0 2 1212 195 42 0 0 chr17 82223457 82223481 -13049170 + (TA)n Simple_repeat Simple_repeat 1 24 0 2 1212 673 76 9 9 chr17 82223742 82223848 -13048803 + (TA)n Simple_repeat Simple_repeat 1 106 0 3 1212 333 274 53 0 chr17 82224390 82224485 -13048166 + B4A SINE B4 126 225 -67 3 1212 2882 68 39 8 chr17 82224555 82224939 -13047712 - MTA_Mm LTR MaLR 0 396 1 3 1212 401 19 0 36 chr17 82224962 82225017 -13047634 + (CATA)n Simple_repeat Simple_repeat 4 56 0 3 1212 23 0 0 0 chr17 82225033 82225056 -13047595 + AT_rich Low_complexity Low_complexity 1 23 0 3 1212 1190 58 0 7 chr17 82225900 82226055 -13046596 - L1_Mus2 LINE L1 -622 5944 5791 3 1212 34256 61 4 1 chr17 82226055 82231253 -13041398 + L1Md_F2 LINE L1 414 5585 -298 3 1212 7890 53 5 0 chr17 82231254 82232233 -13040418 + L1Md_F2 LINE L1 5587 6570 -12 3 1212 3880 113 9 2 chr17 82232234 82232810 -13039841 - L1_Mus2 LINE L1 -77 5806 5227 3 1212 29350 82 20 6 chr17 82232795 82237575 -13035076 - L1Md_F2 LINE L1 -14 6568 1721 3 1212 2705 99 21 8 chr17 82237572 82237947 -13034704 - LSU-rRNA_Hsa rRNA rRNA -1021 4014 3635 3 1212 779 44 43 34 chr17 82237937 82238054 -13034597 - L1_Mus2 LINE L1 -625 5258 5141 3 1212 4684 77 5 0 chr17 82238054 82238674 -13033977 + L1_Mus2 LINE L1 5943 6565 -1 3 1212 408 67 0 0 chr17 82238943 82239003 -13033648 + (GA)n Simple_repeat Simple_repeat 1 60 0 3 1212 514 305 92 31 chr17 82239948 82240395 -13032256 - L1MB7 LINE L1 -23 6161 5688 3 1212 426 175 0 0 chr17 82240406 82240486 -13032165 + CT-rich Low_complexity Low_complexity 65 144 0 3 1212 221 30 61 0 chr17 82240942 82240975 -13031676 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 3 1212 883 198 21 5 chr17 82241986 82242174 -13030477 + Lx2B LINE L1 6804 6994 -6 3 1212 4783 108 59 1 chr17 82242268 82242976 -13029675 + Lx2 LINE L1 6244 6992 -5 3 1212 414 0 0 0 chr17 82242978 82243024 -13029627 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 1212 1083 16 0 0 chr17 82243024 82243148 -13029503 + (TG)n Simple_repeat Simple_repeat 2 126 0 3 1212 250 282 14 0 chr17 82243157 82243228 -13029423 + (TCTG)n Simple_repeat Simple_repeat 1 72 0 3 1212 191 36 36 0 chr17 82244007 82244035 -13028616 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3 1212 27 62 0 0 chr17 82244137 82244185 -13028466 + AT_rich Low_complexity Low_complexity 1 48 0 3 1212 1630 154 49 23 chr17 82244590 82244896 -13027755 - ORR1B1 LTR MaLR -3 391 78 3 1212 1368 122 17 9 chr17 82245810 82246042 -13026609 - Lx3_Mus LINE L1 -8 7001 6768 3 1212 5757 90 16 1 chr17 82246047 82246242 -13026409 + Lx3_Mus LINE L1 5076 5270 -616 3 1212 222 62 0 0 chr17 82246242 82246274 -13026377 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 3 1212 5757 92 15 1 chr17 82246274 82247042 -13025609 + Lx3_Mus LINE L1 5271 6052 -957 3 1212 30 0 0 0 chr17 82247333 82247363 -13025288 + AT_rich Low_complexity Low_complexity 1 30 0 3 1212 396 0 0 0 chr17 82247402 82247446 -13025205 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1212 207 0 0 0 chr17 82247533 82247556 -13025095 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 3 1212 495 0 0 0 chr17 82248321 82248376 -13024275 + (TC)n Simple_repeat Simple_repeat 1 55 0 3 1212 255 321 0 12 chr17 82248378 82248460 -13024191 - Lx8 LINE L1 -156 7317 7237 3 1212 447 19 0 0 chr17 82249602 82249654 -13022997 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 1212 396 0 0 0 chr17 82249654 82249697 -13022954 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1212 690 264 7 40 chr17 82250434 82250584 -13022067 - B1_Mur1 SINE Alu 0 149 5 3 1212 314 278 0 11 chr17 82250842 82250933 -13021718 - HAL1-2a_MD LINE L1 -525 2499 2410 3 1212 470 109 0 11 chr17 82250943 82251036 -13021615 + (TG)n Simple_repeat Simple_repeat 1 92 0 3 1212 193 362 91 14 chr17 82252085 82252228 -13020423 + MIRc SINE MIR 13 166 -102 3 1212 478 311 178 16 chr17 82252289 82252603 -13020048 + MLT1A0 LTR MaLR 1 365 0 3 1212 1279 132 145 0 chr17 82253024 82253258 -13019393 + Lx2A LINE L1 6730 6997 -11 3 1212 925 74 15 0 chr17 82253258 82253393 -13019258 + (GAAA)n Simple_repeat Simple_repeat 1 137 0 3 1212 182 253 0 160 chr17 82253799 82253893 -13018758 - L3 LINE CR1 -3449 1040 962 3 1212 3352 224 63 6 chr17 82254145 82254934 -13017717 - Lx9 LINE L1 -269 7375 6542 3 1212 2951 155 66 29 chr17 82255141 82255759 -13016892 - L1_Mur2 LINE L1 -755 5122 4482 3 1212 225 296 0 0 chr17 82255887 82255941 -13016710 - Lx9 LINE L1 -918 6726 6673 3 1212 1357 273 65 48 chr17 82255940 82256506 -13016145 + Lx7 LINE L1 5625 6200 -1496 3 1212 222 191 0 0 chr17 82256509 82256556 -13016095 + (TA)n Simple_repeat Simple_repeat 1 47 0 3 1212 871 95 0 31 chr17 82257058 82257221 -13015430 + (GAA)n Simple_repeat Simple_repeat 1 158 0 3 1212 363 339 19 53 chr17 82257438 82257644 -13015007 + L1M5 LINE L1 4789 4987 -1159 3 1212 338 269 11 0 chr17 82257941 82258034 -13014617 + L1M5 LINE L1 5384 5477 -696 3 1212 750 230 0 0 chr17 82259846 82260207 -13012444 + (TG)n Simple_repeat Simple_repeat 1 361 0 3 1212 537 269 0 0 chr17 82260243 82260414 -13012237 + (TG)n Simple_repeat Simple_repeat 2 172 0 3 1212 393 305 0 7 chr17 82260421 82260565 -13012086 + L1M5 LINE L1 5662 5800 -440 3 1212 23 54 0 0 chr17 82260623 82260660 -13011991 + AT_rich Low_complexity Low_complexity 1 37 0 3 1212 699 329 98 10 chr17 82260755 82261246 -13011405 + L1MB3 LINE L1 5475 6008 -175 3 1212 1060 88 0 7 chr17 82261429 82261577 -13011074 + B1_Mus1 SINE Alu 1 147 -1 3 1212 213 160 40 0 chr17 82261579 82261629 -13011022 + (CAA)n Simple_repeat Simple_repeat 2 53 0 3 1212 262 273 94 75 chr17 82261956 82262221 -13010430 - L1MA9 LINE L1 -22 6290 6021 3 1212 463 309 36 30 chr17 82262394 82262561 -13010090 + MLT1A1 LTR MaLR 229 396 -12 3 1212 279 0 0 0 chr17 82262583 82262614 -13010037 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1212 255 148 74 0 chr17 82262637 82262691 -13009960 + L1M3 LINE L1 5014 5071 -1069 3 1212 375 246 0 197 chr17 82262698 82262850 -13009801 + MTE2a LTR MaLR 6 127 -252 3 1212 316 277 21 21 chr17 82262849 82262945 -13009706 - MTE2b LTR MaLR -12 367 272 3 1212 596 304 74 51 chr17 82262988 82263203 -13009448 + MTE2a LTR MaLR 160 379 0 3 1212 882 271 86 4 chr17 82263274 82263541 -13009110 - MTE-int LTR MaLR -1084 496 208 3 1212 617 262 74 69 chr17 82263618 82263835 -13008816 - MTE-int LTR MaLR -1362 218 1 3 1212 180 0 0 0 chr17 82263838 82263858 -13008793 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 1212 1114 76 0 7 chr17 82263917 82264062 -13008589 - B1_Mus1 SINE Alu -4 144 1 3 1212 273 173 19 19 chr17 82264165 82264218 -13008433 - MTE2b LTR MaLR -269 110 58 3 1212 202 189 38 0 chr17 82264417 82264470 -13008181 + (TA)n Simple_repeat Simple_repeat 1 55 0 3 1212 23 0 0 0 chr17 82264553 82264576 -13008075 + AT_rich Low_complexity Low_complexity 1 23 0 3 1212 224 229 0 0 chr17 82264923 82264971 -13007680 + (CATA)n Simple_repeat Simple_repeat 1 48 0 3 1212 4140 37 2 21 chr17 82265045 82265564 -13007087 - L1Md_F2 LINE L1 -3 6579 6071 3 1212 657 69 0 0 chr17 82267374 82267461 -13005190 + (TC)n Simple_repeat Simple_repeat 2 88 0 3 1212 378 0 0 0 chr17 82268341 82268383 -13004268 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1212 360 0 0 0 chr17 82268383 82268422 -13004229 + (GA)n Simple_repeat Simple_repeat 1 40 0 3 1212 1303 219 135 0 chr17 82268427 82268746 -13003905 + MTD LTR MaLR 50 411 -8 3 1212 214 274 0 0 chr17 82268957 82269008 -13003643 + B4A SINE B4 92 142 -150 3 1212 242 224 0 15 chr17 82269056 82269124 -13003527 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 3 1212 7441 160 58 21 chr17 82269722 82271946 -13000705 + Lx2 LINE L1 4670 6997 0 3 1212 706 288 84 0 chr17 82272008 82272199 -13000452 + ORR1D2 LTR MaLR 3 209 -161 3 1212 504 0 0 0 chr17 82272874 82272930 -12999721 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 1212 679 191 179 0 chr17 82272969 82273142 -12999509 - RMER1B Other Other -2 1064 861 3 1212 299 188 0 0 chr17 82273167 82273215 -12999436 - RMER1A Other Other -950 80 33 3 1212 39 38 0 0 chr17 82273250 82273303 -12999348 + AT_rich Low_complexity Low_complexity 1 53 0 3 1212 767 253 29 6 chr17 82273322 82273497 -12999154 - 7SK RNA RNA -131 200 22 3 1212 1307 288 128 16 chr17 82273497 82273988 -12998663 + Lx7 LINE L1 6745 7290 -406 3 1212 332 77 0 19 chr17 82274200 82274253 -12998398 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1212 264 325 69 17 chr17 82274253 82274369 -12998282 - RSINE1 SINE B4 -41 124 3 3 1212 473 294 51 60 chr17 82276073 82276290 -12996361 - B3 SINE B2 0 216 2 3 1212 24 53 0 0 chr17 82276391 82276429 -12996222 + AT_rich Low_complexity Low_complexity 1 38 0 3 1212 222 42 0 78 chr17 82276796 82276847 -12995804 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 3 1212 671 313 66 77 chr17 82276960 82277427 -12995224 - RLTR17 LTR ERVK -126 566 105 3 1212 25 31 0 0 chr17 82277533 82277565 -12995086 + AT_rich Low_complexity Low_complexity 1 32 0 3 1212 461 204 10 0 chr17 82278654 82278757 -12993894 + RLTR42-int LTR ERVK 1893 1996 -3526 3 1212 5607 145 75 7 chr17 82278813 82280110 -12992541 + Lx4B LINE L1 5268 6654 -404 3 1212 243 0 0 0 chr17 82281083 82281110 -12991541 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1212 269 336 42 28 chr17 82281142 82281286 -12991365 + RSINE1 SINE B4 4 149 -16 3 1212 390 21 0 0 chr17 82282131 82282178 -12990473 + (TAA)n Simple_repeat Simple_repeat 2 48 0 3 1212 611 210 24 24 chr17 82282827 82282954 -12989697 - B3 SINE B2 0 216 90 3 1212 228 170 0 0 chr17 82283196 82283249 -12989402 + GA-rich Low_complexity Low_complexity 3 55 0 3 1212 1158 122 0 0 chr17 82283290 82283470 -12989181 + (GGA)n Simple_repeat Simple_repeat 1 180 0 3 1212 266 169 0 57 chr17 82283470 82283547 -12989104 + GA-rich Low_complexity Low_complexity 13 85 0 3 1212 1165 73 0 33 chr17 82283548 82283732 -12988919 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 3 1212 1415 39 0 6 chr17 82283734 82283913 -12988738 + (GAA)n Simple_repeat Simple_repeat 3 180 0 3 1212 906 10 0 0 chr17 82283913 82284016 -12988635 + (GGAGAA)n Simple_repeat Simple_repeat 1 103 0 3 1212 214 191 0 0 chr17 82284737 82284779 -12987872 + (TAA)n Simple_repeat Simple_repeat 1 42 0 3 1212 186 43 0 0 chr17 82284941 82284964 -12987687 + (TCC)n Simple_repeat Simple_repeat 2 24 0 3 1212 211 304 94 17 chr17 82286003 82286120 -12986531 - ID_B1 SINE B4 -12 212 87 4 1212 196 263 0 73 chr17 82286222 82286304 -12986347 + L2 LINE L2 1223 1298 -2121 4 1212 26 30 0 0 chr17 82286595 82286628 -12986023 + AT_rich Low_complexity Low_complexity 1 33 0 4 1212 21 36 0 0 chr17 82286968 82286996 -12985655 + AT_rich Low_complexity Low_complexity 1 28 0 4 1212 355 284 57 28 chr17 82287404 82287635 -12985016 + L1_Mur3 LINE L1 4202 4428 -1449 4 1212 645 317 74 44 chr17 82287658 82288024 -12984627 + Lx8 LINE L1 5357 5733 -114 4 1212 748 123 0 0 chr17 82288272 82288394 -12984257 - L1Md_T LINE L1 0 6582 6461 4 1212 286 0 0 0 chr17 82288394 82288425 -12984226 + L1Md_T LINE L1 6369 6399 -183 4 1212 869 318 26 7 chr17 82288448 82288758 -12983893 + Lx8 LINE L1 6189 6504 -969 4 1212 275 377 29 24 chr17 82288857 82289066 -12983585 + Lx8 LINE L1 7129 7338 -135 4 1212 440 62 16 0 chr17 82289146 82289210 -12983441 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 4 1212 21 36 0 0 chr17 82289230 82289258 -12983393 + AT_rich Low_complexity Low_complexity 1 28 0 4 1212 310 348 0 29 chr17 82289859 82289998 -12982653 - ORR1C2 LTR MaLR -244 140 6 4 1212 4632 180 42 7 chr17 82291039 82292011 -12980640 + L1_Mur1 LINE L1 2845 3850 -2036 4 1212 1940 220 34 141 chr17 82292240 82293107 -12979544 - RMER17B LTR ERVK -215 693 1 4 1212 212 122 24 0 chr17 82293788 82293829 -12978822 + (TTATA)n Simple_repeat Simple_repeat 5 46 0 4 1212 200 160 25 62 chr17 82293871 82293951 -12978700 + (TTATA)n Simple_repeat Simple_repeat 3 79 0 4 1212 343 321 115 67 chr17 82294185 82294785 -12977866 - L1_Mur3 LINE L1 -1633 4507 3879 4 1212 25 0 0 0 chr17 82294901 82294926 -12977725 + AT_rich Low_complexity Low_complexity 1 25 0 4 1212 932 290 34 44 chr17 82294951 82295446 -12977205 - Lx9 LINE L1 -83 7561 7072 4 1212 310 264 0 0 chr17 82295549 82295621 -12977030 + CT-rich Low_complexity Low_complexity 1 72 0 4 1212 306 306 34 13 chr17 82295621 82295770 -12976881 - L1_Mur3 LINE L1 -2453 3690 3510 4 1212 216 135 0 0 chr17 82295839 82295876 -12976775 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1212 399 354 82 0 chr17 82295881 82296028 -12976623 - B3A SINE B2 -13 185 27 4 1212 1433 222 135 0 chr17 82296040 82296441 -12976210 - Lx9 LINE L1 0 7644 7190 4 1212 714 331 56 29 chr17 82296540 82297096 -12975555 - L1_Rod LINE L1 -2429 3418 2848 4 1212 339 299 113 35 chr17 82297165 82297307 -12975344 + ORR1E LTR MaLR 207 359 0 4 1212 23 68 0 0 chr17 82297327 82297371 -12975280 + AT_rich Low_complexity Low_complexity 1 44 0 4 1212 1555 359 39 20 chr17 82297484 82298297 -12974354 + Lx8 LINE L1 6619 7447 -26 4 1212 520 331 6 6 chr17 82299206 82299385 -12973266 + B3A SINE B2 2 180 -18 4 1212 767 226 6 19 chr17 82299440 82299602 -12973049 - RLTR17 LTR ERVK 0 692 533 4 1212 2019 152 57 24 chr17 82299596 82299968 -12972683 - RLTR17 LTR ERVK -279 413 30 4 1212 21 0 0 0 chr17 82300018 82300039 -12972612 + AT_rich Low_complexity Low_complexity 1 21 0 4 1212 300 174 11 34 chr17 82301209 82301298 -12971353 + GA-rich Low_complexity Low_complexity 2 88 0 4 1212 301 204 70 17 chr17 82301988 82302103 -12970548 + Lx7 LINE L1 7463 7583 -113 4 1212 23 0 0 0 chr17 82302107 82302130 -12970521 + AT_rich Low_complexity Low_complexity 1 23 0 4 1212 8342 166 11 6 chr17 82302130 82303643 -12969008 - Lx4A LINE L1 -1 7057 5529 4 1212 1930 197 20 59 chr17 82303677 82304135 -12968516 - L1_Mur3 LINE L1 -7 5873 5434 4 1212 276 30 0 0 chr17 82306875 82306908 -12965743 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1212 27 62 0 0 chr17 82307245 82307293 -12965358 + AT_rich Low_complexity Low_complexity 1 48 0 4 1212 231 328 0 0 chr17 82307376 82307440 -12965211 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 1212 425 304 79 5 chr17 82307756 82307971 -12964680 - L1MA6 LINE L1 -24 6276 6046 4 1212 826 270 34 0 chr17 82308488 82308692 -12963959 - B3 SINE B2 0 216 6 4 1212 351 353 141 10 chr17 82308693 82308899 -12963752 - B4 SINE B4 -59 233 1 4 1212 322 256 102 29 chr17 82309882 82310019 -12962632 - HAL1-3A_ME LINE L1 -811 2047 1901 4 1212 634 309 103 0 chr17 82310314 82310489 -12962162 - B3 SINE B2 -23 193 1 4 1212 585 0 0 0 chr17 82310800 82310865 -12961786 + (GA)n Simple_repeat Simple_repeat 1 65 0 4 1212 625 278 57 19 chr17 82311960 82312169 -12960482 - ID_B1 SINE B4 -7 217 1 4 1212 27 49 0 0 chr17 82312714 82312755 -12959896 + AT_rich Low_complexity Low_complexity 1 41 0 4 1213 318 244 8 16 chr17 82314030 82314193 -12958458 + (CCA)n Simple_repeat Simple_repeat 1 161 0 4 1213 2460 298 37 57 chr17 82314195 82315145 -12957506 - Lx7 LINE L1 -367 7329 6399 4 1213 804 262 63 30 chr17 82315137 82315452 -12957199 - Lx7 LINE L1 -1828 5868 5541 4 1213 4464 257 55 18 chr17 82315489 82317002 -12955649 + Lx7 LINE L1 4461 6012 -1684 4 1213 21 0 0 0 chr17 82317010 82317031 -12955620 + AT_rich Low_complexity Low_complexity 1 21 0 4 1213 360 0 0 0 chr17 82317031 82317071 -12955580 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1213 511 341 11 40 chr17 82317099 82317276 -12955375 - B3A SINE B2 -16 182 11 4 1213 291 272 35 69 chr17 82317328 82317415 -12955236 - RSINE1 SINE B4 0 165 82 4 1213 1006 329 90 50 chr17 82317793 82319005 -12953646 - L1MA6 LINE L1 -38 6262 5001 4 1213 21 0 0 0 chr17 82319576 82319597 -12953054 + AT_rich Low_complexity Low_complexity 1 21 0 4 1213 7813 121 81 4 chr17 82320238 82322385 -12950266 + L1_Mus3 LINE L1 4290 6637 -1 4 1213 355 306 73 14 chr17 82322787 82323006 -12949645 - L1ME3B LINE L1 -250 5990 5759 4 1213 640 86 19 0 chr17 82323062 82323167 -12949484 + (TCTA)n Simple_repeat Simple_repeat 3 109 0 4 1213 545 316 150 11 chr17 82323956 82324222 -12948429 - Lx8 LINE L1 -182 7291 6989 4 1213 1018 292 71 46 chr17 82324222 82324617 -12948034 + Lx8 LINE L1 6386 6790 -683 4 1213 353 350 81 78 chr17 82324839 82325188 -12947463 - L2 LINE L2 -387 3032 2682 4 1213 1959 192 63 2 chr17 82325188 82325516 -12947135 + MTC LTR MaLR 1 353 -68 4 1213 441 0 0 0 chr17 82325516 82325565 -12947086 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 4 1213 1959 192 63 2 chr17 82325565 82325633 -12947018 + MTC LTR MaLR 354 420 -1 4 1213 353 350 81 78 chr17 82325633 82325742 -12946909 - L2 LINE L2 -738 2681 2573 4 1213 3239 94 70 2 chr17 82325743 82326409 -12946242 + L1_Mus3 LINE L1 5265 6010 -628 4 1213 1068 143 16 26 chr17 82326908 82327102 -12945549 + B2_Mm2 SINE B2 4 195 0 4 1213 672 264 35 0 chr17 82327110 82327311 -12945340 + B3 SINE B2 3 210 -6 4 1213 22 0 0 0 chr17 82327569 82327591 -12945060 + AT_rich Low_complexity Low_complexity 1 22 0 4 1213 232 322 34 11 chr17 82327599 82327687 -12944964 - LTR16D LTR ERVL -17 634 545 4 1213 253 216 11 11 chr17 82327933 82328022 -12944629 + (TG)n Simple_repeat Simple_repeat 2 90 0 4 1213 317 211 8 23 chr17 82328796 82328927 -12943724 + CT-rich Low_complexity Low_complexity 4 132 0 4 1213 301 241 136 11 chr17 82328938 82329026 -12943625 - B1F SINE Alu -9 140 42 4 1213 22 0 0 0 chr17 82329475 82329497 -12943154 + AT_rich Low_complexity Low_complexity 1 22 0 4 1213 209 170 0 36 chr17 82330437 82330492 -12942159 + CT-rich Low_complexity Low_complexity 2 54 0 4 1213 369 0 0 0 chr17 82330907 82330948 -12941703 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1213 3027 72 2 2 chr17 82331139 82331542 -12941109 + L1_Mus2 LINE L1 6162 6564 -2 4 1213 533 352 10 58 chr17 82331573 82331778 -12940873 + ID_B1 SINE B4 1 195 -29 4 1213 554 140 10 0 chr17 82331831 82331931 -12940720 + (TA)n Simple_repeat Simple_repeat 2 102 0 4 1213 897 226 10 31 chr17 82332137 82332329 -12940322 + ORR1D1 LTR MaLR 2 189 -185 4 1213 278 297 0 0 chr17 82332329 82332403 -12940248 + CT-rich Low_complexity Low_complexity 2 75 0 4 1213 822 275 14 10 chr17 82332406 82332615 -12940036 + ORR1D1 LTR MaLR 175 384 0 4 1213 187 289 61 82 chr17 82332933 82333031 -12939620 + L3 LINE CR1 3224 3319 -1170 4 1213 1464 39 0 0 chr17 82333066 82333245 -12939406 + (TCTCCC)n Simple_repeat Simple_repeat 1 179 0 4 1213 1160 67 6 27 chr17 82333256 82333439 -12939212 + (TCTCCC)n Simple_repeat Simple_repeat 1 179 0 4 1213 299 240 79 10 chr17 82333825 82333926 -12938725 + MLT1B LTR MaLR 283 390 0 4 1213 22 35 0 0 chr17 82334200 82334229 -12938422 + AT_rich Low_complexity Low_complexity 1 29 0 4 1213 3169 66 58 7 chr17 82334495 82334925 -12937726 + L1Md_F2 LINE L1 6121 6572 -10 4 1213 342 88 0 0 chr17 82334949 82335006 -12937645 - Lx LINE L1 -5 6649 6593 4 1213 418 131 149 21 chr17 82335621 82335715 -12936936 + L1Md_F2 LINE L1 6465 6570 -12 4 1213 225 235 204 70 chr17 82336019 82336161 -12936490 + MER53 DNA hAT 1 161 -32 4 1213 2957 139 46 17 chr17 82336481 82337068 -12935583 - L1_Mur3 LINE L1 -1477 4403 3800 4 1213 399 354 45 30 chr17 82337227 82337428 -12935223 + MLT1A0 LTR MaLR 160 363 -2 4 1213 189 147 0 0 chr17 82337669 82337703 -12934948 + (TAAAAA)n Simple_repeat Simple_repeat 4 37 0 4 1213 5505 97 22 1 chr17 82338054 82338842 -12933809 - Lx3_Mus LINE L1 -15 6994 6191 4 1213 665 291 89 51 chr17 82338843 82339078 -12933573 - MTEa LTR MaLR -106 273 30 4 1213 1170 75 0 0 chr17 82339187 82339334 -12933317 - B1_Mus1 SINE Alu 0 148 2 4 1213 355 353 45 33 chr17 82341688 82341931 -12930720 + Lx8 LINE L1 6963 7208 -265 4 1213 401 305 13 25 chr17 82342555 82342684 -12929967 - MTEb LTR MaLR -22 357 223 4 1213 1231 181 18 5 chr17 82342990 82343212 -12929439 - URR1A DNA MER1_type 0 226 2 4 1213 273 119 0 0 chr17 82343789 82343831 -12928820 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 4 1213 226 67 22 22 chr17 82343831 82343877 -12928774 + (TTATA)n Simple_repeat Simple_repeat 1 46 0 4 1213 922 234 63 31 chr17 82343990 82344308 -12928343 - Lx7 LINE L1 -10 7686 7359 4 1213 1113 15 0 0 chr17 82344313 82344444 -12928207 + (TAGA)n Simple_repeat Simple_repeat 4 134 0 4 1213 1728 214 36 3 chr17 82344459 82344819 -12927832 - Lx7 LINE L1 -886 6810 6439 4 1213 420 218 30 0 chr17 82344814 82344915 -12927736 - Lx7 LINE L1 -1488 6208 6105 4 1213 270 264 72 33 chr17 82344940 82345093 -12927558 - Lx7 LINE L1 -1566 6130 5972 4 1213 420 20 0 0 chr17 82346264 82346313 -12926338 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 4 1213 233 183 16 48 chr17 82346448 82346511 -12926140 + L1MC4 LINE L1 7966 8026 -16 4 1213 333 0 0 0 chr17 82346867 82346904 -12925747 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1213 585 0 0 0 chr17 82346904 82346968 -12925683 + (GA)n Simple_repeat Simple_repeat 2 66 0 5 1213 1423 206 106 83 chr17 82347955 82348444 -12924207 - RLTR11A LTR ERVK 0 527 1 5 1213 1751 107 4 0 chr17 82348482 82348726 -12923925 + MTB LTR MaLR 151 395 -5 5 1213 21 0 0 0 chr17 82349810 82349831 -12922820 + AT_rich Low_complexity Low_complexity 1 21 0 5 1213 2712 127 5 5 chr17 82349836 82350270 -12922381 - Lx2B LINE L1 -362 6638 6205 5 1213 741 208 38 12 chr17 82350270 82350456 -12922195 - RLTR20B3 LTR ERVK -29 531 319 5 1213 3426 164 70 2 chr17 82350485 82351114 -12921537 - RMER6C LTR ERVK -7 683 12 5 1213 390 150 0 12 chr17 82351114 82351195 -12921456 + Lx4A LINE L1 6977 7056 -2 5 1213 25 0 0 0 chr17 82351196 82351221 -12921430 + AT_rich Low_complexity Low_complexity 1 25 0 5 1213 26 0 0 0 chr17 82351265 82351291 -12921360 + AT_rich Low_complexity Low_complexity 1 26 0 5 1213 1023 102 0 13 chr17 82351294 82351443 -12921208 + B1_Mus1 SINE Alu 1 147 -1 5 1213 207 0 0 0 chr17 82351445 82351468 -12921183 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 1213 383 273 86 21 chr17 82351585 82351772 -12920879 + L1M5 LINE L1 3371 3569 -2577 5 1213 897 104 34 11 chr17 82351938 82352113 -12920538 + (GGGAGA)n Simple_repeat Simple_repeat 1 179 0 5 1213 224 91 23 0 chr17 82352131 82352175 -12920476 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1213 336 155 0 0 chr17 82352196 82352267 -12920384 + CT-rich Low_complexity Low_complexity 2 72 0 5 1213 192 395 32 40 chr17 82352336 82352460 -12920191 + L2a LINE L2 3018 3140 -286 5 1213 539 15 15 0 chr17 82352814 82352882 -12919769 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 1213 495 48 0 0 chr17 82353292 82353354 -12919297 + (TG)n Simple_repeat Simple_repeat 1 62 0 5 1213 437 351 31 90 chr17 82353379 82353601 -12919050 - B4 SINE B4 -1 291 83 5 1213 411 68 0 0 chr17 82353616 82353675 -12918976 + (TG)n Simple_repeat Simple_repeat 1 59 0 5 1213 433 352 70 35 chr17 82353679 82353906 -12918745 - B4A SINE B4 -10 282 48 5 1213 213 152 0 21 chr17 82354033 82354080 -12918571 + A-rich Low_complexity Low_complexity 1 46 0 5 1213 294 179 0 0 chr17 82354893 82354949 -12917702 + (CCA)n Simple_repeat Simple_repeat 1 56 0 5 1213 234 0 0 0 chr17 82356897 82356923 -12915728 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1213 24 0 0 0 chr17 82357761 82357785 -12914866 + AT_rich Low_complexity Low_complexity 1 24 0 5 1213 486 46 0 0 chr17 82358191 82358256 -12914395 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1213 288 0 0 0 chr17 82358539 82358571 -12914080 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 1213 1957 236 32 68 chr17 82359133 82359673 -12912978 - RMER19C LTR ERVK 0 611 36 5 1213 313 332 124 52 chr17 82359723 82360110 -12912541 - L1MC LINE L1 -1338 4808 4394 5 1213 29520 101 9 4 chr17 82360151 82364165 -12908486 - L1_Mus1 LINE L1 -3 6564 2540 5 1213 3093 44 29 3 chr17 82364165 82364551 -12908100 - MTA_Mm LTR MaLR 0 396 1 5 1213 29520 105 17 2 chr17 82364551 82365949 -12906702 - L1_Mus1 LINE L1 -3344 2539 1108 5 1213 1624 151 1 1 chr17 82365944 82366240 -12906411 - L1_Mus1 LINE L1 -5413 1203 925 5 1213 1836 109 31 22 chr17 82366240 82366559 -12906092 - RLTRETN_Mm LTR ERVK 0 322 1 5 1213 17122 149 29 19 chr17 82366559 82373368 -12899283 - ETnERV2-int LTR ERVK -282 7124 1 5 1213 1859 102 31 22 chr17 82373368 82373687 -12898964 - RLTRETN_Mm LTR ERVK 0 322 1 5 1213 660 240 15 0 chr17 82373687 82373887 -12898764 - L1Md_F LINE L1 -5686 833 631 5 1213 355 295 21 7 chr17 82373891 82374031 -12898620 - L1Md_F LINE L1 -5800 719 578 5 1213 492 281 30 47 chr17 82374089 82374324 -12898327 - L1VL1 LINE L1 -6147 275 45 5 1213 23 33 0 0 chr17 82374434 82374464 -12898187 + AT_rich Low_complexity Low_complexity 1 30 0 5 1213 23 68 0 0 chr17 82376768 82376812 -12895839 + AT_rich Low_complexity Low_complexity 1 44 0 5 1213 459 0 0 0 chr17 82377367 82377418 -12895233 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1213 260 390 57 23 chr17 82377487 82377663 -12894988 + B3A SINE B2 1 182 -16 5 1213 380 288 196 9 chr17 82377817 82378045 -12894606 - ORR1E LTR MaLR -67 312 4 5 1213 189 107 0 0 chr17 82378111 82378139 -12894512 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 5 1213 458 256 0 72 chr17 82378391 82378530 -12894121 + B1_Mur1 SINE Alu 1 129 -20 5 1213 24 32 0 0 chr17 82378747 82378778 -12893873 + AT_rich Low_complexity Low_complexity 1 31 0 5 1213 191 114 29 0 chr17 82378918 82378953 -12893698 + (TTTTC)n Simple_repeat Simple_repeat 3 38 0 5 1213 216 258 95 108 chr17 82379973 82380047 -12892604 - RSINE1 SINE B4 0 165 93 5 1213 290 336 44 38 chr17 82380037 82380195 -12892456 - B4A SINE B4 -133 159 1 5 1213 4817 126 15 55 chr17 82381080 82382338 -12890313 - L1VL4 LINE L1 -4149 1734 548 5 1213 420 278 22 28 chr17 82382374 82382552 -12890099 - Lx7 LINE L1 -360 7336 7160 5 1213 226 308 105 32 chr17 82382697 82382821 -12889830 + MIRc SINE MIR 92 224 -44 5 1213 281 167 0 67 chr17 82382914 82383004 -12889647 + T-rich Low_complexity Low_complexity 2 85 0 5 1213 987 104 14 0 chr17 82383541 82383685 -12888966 + B1_Mm SINE Alu 1 146 -1 5 1213 277 325 159 45 chr17 82384131 82384263 -12888388 + B3A SINE B2 3 149 -49 5 1213 331 264 54 99 chr17 82384316 82384403 -12888248 + L1MA9 LINE L1 5827 5916 -396 5 1213 339 25 0 0 chr17 82384403 82384443 -12888208 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 5 1213 1180 15 0 0 chr17 82384443 82384575 -12888076 - B1_Mm SINE Alu -13 134 3 5 1213 331 264 54 99 chr17 82384575 82384709 -12887942 + L1MA9 LINE L1 5917 6038 -274 5 1213 683 221 66 38 chr17 82385218 82385430 -12887221 - Lx7 LINE L1 -18 7678 7461 5 1213 219 141 0 48 chr17 82385440 82385546 -12887105 + A-rich Low_complexity Low_complexity 1 100 0 5 1213 5048 29 0 0 chr17 82385677 82386298 -12886353 - L1_Mm LINE L1 -65 5818 5198 5 1213 243 61 0 0 chr17 82386377 82386410 -12886241 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 5 1213 10491 168 157 16 chr17 82387567 82391271 -12881380 - Lx4B LINE L1 -4 7054 2819 5 1213 180 0 0 0 chr17 82391273 82391293 -12881358 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 1213 470 91 0 13 chr17 82391365 82391443 -12881208 + (TCTA)n Simple_repeat Simple_repeat 4 80 0 5 1213 378 0 0 0 chr17 82391490 82391532 -12881119 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 1213 563 293 89 57 chr17 82391706 82391906 -12880745 + B4 SINE B4 2 220 -72 5 1213 351 0 0 0 chr17 82391906 82391945 -12880706 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1213 563 293 89 57 chr17 82391945 82392026 -12880625 + B4 SINE B4 221 292 0 5 1213 1125 90 0 0 chr17 82393412 82393556 -12879095 - B1_Mus2 SINE Alu -2 145 2 5 1213 22 56 0 0 chr17 82393559 82393595 -12879056 + AT_rich Low_complexity Low_complexity 1 36 0 5 1213 515 321 62 85 chr17 82394448 82394836 -12877815 - MLT2C2 LTR ERVL -70 394 16 5 1213 22 35 0 0 chr17 82394932 82394961 -12877690 + AT_rich Low_complexity Low_complexity 1 29 0 5 1213 3576 142 62 44 chr17 82394988 82395746 -12876905 + RLTR13D6 LTR ERVK 1 673 -229 5 1213 22 0 0 0 chr17 82396364 82396386 -12876265 + GC_rich Low_complexity Low_complexity 1 22 0 5 1213 999 215 128 36 chr17 82397320 82397624 -12875027 + IAPEY3_LTR LTR ERVK 1 332 0 5 1213 37890 30 0 1 chr17 82398038 82404445 -12868206 - L1Md_T LINE L1 0 6585 126 5 1213 3541 224 41 19 chr17 82405096 82406187 -12866464 - Lx2B LINE L1 -17 7041 5974 5 1213 2338 35 0 20 chr17 82406958 82407300 -12865351 + L1Md_F3 LINE L1 6276 6584 0 5 1213 614 71 12 0 chr17 82407304 82407388 -12865263 + B1_Mus2 SINE Alu 58 142 -5 5 1213 241 183 96 145 chr17 82407319 82407402 -12865249 + B4 SINE B4 165 243 -49 5 1213 217 253 35 0 chr17 82407412 82407499 -12865152 + (TATATG)n Simple_repeat Simple_repeat 4 93 0 5 1213 264 344 16 0 chr17 82407717 82407839 -12864812 - Lx8 LINE L1 -398 7075 6952 5 1213 405 307 95 23 chr17 82407954 82408449 -12864202 + L1_Rod LINE L1 5009 5548 -752 5 1213 237 242 0 0 chr17 82408630 82408696 -12863955 + Lx8 LINE L1 7392 7457 -16 5 1213 187 189 54 0 chr17 82408750 82408787 -12863864 + MIRm SINE MIR 112 150 -126 5 1213 271 210 11 69 chr17 82409584 82409671 -12862980 + GA-rich Low_complexity Low_complexity 2 83 0 5 1213 3517 179 49 15 chr17 82410220 82410896 -12861755 - Lx2B LINE L1 -1 6999 6301 5 1213 15928 170 13 117 chr17 82410896 82411693 -12860958 - L1_Mur1 LINE L1 -277 5609 4844 5 1213 777 280 80 94 chr17 82411693 82412056 -12860595 - RLTR9A LTR ERVK -10 358 1 5 1213 15928 170 13 117 chr17 82412056 82413480 -12859171 - L1_Mur1 LINE L1 -277 4843 3474 5 1213 4134 71 42 3 chr17 82413480 82414048 -12858603 - L1Md_F2 LINE L1 0 6582 5993 5 1213 15928 170 13 117 chr17 82414048 82415483 -12857168 - L1_Mur1 LINE L1 -2413 3473 2009 5 1213 243 0 0 0 chr17 82415529 82415556 -12857095 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 1213 1217 140 20 0 chr17 82416638 82416838 -12855813 - ORR1A4 LTR MaLR -20 309 106 5 1213 420 54 18 0 chr17 82417025 82417081 -12855570 - L1_Mus1 LINE L1 -342 6225 6169 5 1213 873 73 22 0 chr17 82417082 82417219 -12855432 + L1_Mus3 LINE L1 6493 6632 -6 5 1213 1095 62 0 0 chr17 82417327 82417471 -12855180 + (GAAA)n Simple_repeat Simple_repeat 3 146 0 5 1213 351 0 0 0 chr17 82420244 82420283 -12852368 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 1213 298 286 153 20 chr17 82420823 82421215 -12851436 + L1MDa LINE L1 1038 1481 -5152 5 1213 22 70 0 0 chr17 82421563 82421606 -12851045 + AT_rich Low_complexity Low_complexity 1 43 0 5 1213 329 395 34 0 chr17 82421973 82422101 -12850550 - B1F2 SINE Alu -13 136 5 5 1213 219 36 0 0 chr17 82422795 82422823 -12849828 + (CAA)n Simple_repeat Simple_repeat 2 29 0 5 1213 413 254 71 50 chr17 82423126 82423267 -12849384 - B4A SINE B4 -148 144 1 5 1213 483 289 34 67 chr17 82424353 82424531 -12848120 - B3A SINE B2 -11 187 16 5 1213 300 53 0 0 chr17 82425192 82425230 -12847421 + (CAA)n Simple_repeat Simple_repeat 2 39 0 6 1213 331 266 92 23 chr17 82425317 82425448 -12847203 + HAL1-3A_ME LINE L1 1975 2114 -744 6 1213 238 361 21 0 chr17 82425690 82425701 -12846950 - ID_B1 SINE B4 -2 222 194 6 1213 321 270 0 0 chr17 82425701 82425764 -12846887 - B1F SINE Alu -18 131 69 6 1213 238 361 21 0 chr17 82425764 82425787 -12846864 - ID_B1 SINE B4 -2 193 124 6 1213 351 336 9 0 chr17 82425805 82425918 -12846733 + Lx8 LINE L1 7225 7338 -135 6 1213 740 267 13 62 chr17 82426362 82426586 -12846065 - MTE2a LTR MaLR 0 379 167 6 1213 454 211 61 0 chr17 82426595 82426709 -12845942 - Lx9 LINE L1 -8 7636 7516 6 1213 21 0 0 0 chr17 82427612 82427633 -12845018 + AT_rich Low_complexity Low_complexity 1 21 0 6 1213 2653 165 25 19 chr17 82428452 82428934 -12843717 - Lx4A LINE L1 -3 7055 6571 6 1213 8208 124 49 2 chr17 82428934 82430335 -12842316 + L1_Mur2 LINE L1 2358 3824 -2053 6 1213 21 71 0 0 chr17 82430422 82430464 -12842187 + AT_rich Low_complexity Low_complexity 1 42 0 6 1213 558 330 14 59 chr17 82431871 82432090 -12840561 - RMER13A LTR ERVK -12 848 640 6 1213 267 356 40 0 chr17 82432304 82432405 -12840246 - MIRb SINE MIR -39 229 125 6 1213 231 36 0 0 chr17 82433641 82433669 -12838982 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 6 1213 495 0 0 0 chr17 82434348 82434403 -12838248 + (TG)n Simple_repeat Simple_repeat 1 55 0 6 1213 3503 159 23 20 chr17 82435186 82435826 -12836825 - RLTR26 LTR ERVK 0 642 1 6 1213 234 105 0 0 chr17 82436392 82436430 -12836221 + (TTTTTG)n Simple_repeat Simple_repeat 4 41 0 6 1213 1130 88 0 0 chr17 82436440 82436588 -12836063 - B1_Mus1 SINE Alu 0 148 1 6 1213 558 98 0 0 chr17 82436636 82436718 -12835933 + (TA)n Simple_repeat Simple_repeat 2 83 0 6 1213 388 335 0 0 chr17 82436752 82436885 -12835766 - B1F SINE Alu -16 133 1 6 1213 333 186 0 0 chr17 82437253 82437323 -12835328 + (CA)n Simple_repeat Simple_repeat 1 70 0 6 1213 474 18 0 0 chr17 82438462 82438517 -12834134 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1213 1044 97 7 0 chr17 82439071 82439216 -12833435 - B1_Mus1 SINE Alu 0 148 3 6 1213 587 249 192 12 chr17 82439285 82439525 -12833126 - Lx5 LINE L1 -700 6350 6068 6 1213 1104 262 131 21 chr17 82439525 82439914 -12832737 - BGLII_B LTR ERVK 0 441 10 6 1213 354 58 28 28 chr17 82439914 82439985 -12832666 + (CAAAA)n Simple_repeat Simple_repeat 5 75 0 6 1213 8694 139 33 3 chr17 82439985 82441944 -12830707 + Lx2A1 LINE L1 4981 7004 -4 6 1213 2527 154 34 16 chr17 82441973 82442420 -12830231 - Lx5 LINE L1 -968 6082 5628 6 1213 3532 194 34 3 chr17 82442420 82443102 -12829549 + Lx5 LINE L1 6345 7047 -3 6 1213 485 94 12 0 chr17 82443225 82443310 -12829341 + (TC)n Simple_repeat Simple_repeat 2 87 0 6 1213 364 289 188 15 chr17 82443344 82443809 -12828842 + L1MA4 LINE L1 5568 6131 -169 6 1214 1752 179 113 5 chr17 82444368 82444756 -12827895 + Lx3C LINE L1 6545 6974 -2 6 1214 23 33 0 0 chr17 82444990 82445020 -12827631 + AT_rich Low_complexity Low_complexity 1 30 0 6 1214 241 325 95 17 chr17 82445135 82445251 -12827400 + MLT1A0 LTR MaLR 14 138 -227 6 1214 517 352 114 19 chr17 82445580 82445717 -12826934 + MER54A LTR ERVL 2 157 -744 6 1214 275 0 0 28 chr17 82445717 82445753 -12826898 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1214 517 352 114 19 chr17 82445753 82445991 -12826660 + MER54A LTR ERVL 158 412 -489 6 1214 344 333 57 74 chr17 82446323 82446673 -12825978 + L1M5 LINE L1 4490 4833 -1313 6 1214 653 275 60 35 chr17 82447410 82447874 -12824777 - L1MC LINE L1 -1026 5120 4645 6 1214 466 201 78 25 chr17 82447948 82448103 -12824548 + RMER19B LTR ERVK 359 490 -412 6 1214 9751 87 18 1 chr17 82448116 82450226 -12822425 - L1_Mus2 LINE L1 0 6566 4425 6 1214 1223 267 10 23 chr17 82450227 82450530 -12822121 + RMER19C LTR ERVK 266 564 -47 6 1214 11410 152 32 5 chr17 82450531 82452929 -12819722 - Lx LINE L1 -575 6079 3608 6 1214 27 29 0 0 chr17 82453833 82453867 -12818784 + AT_rich Low_complexity Low_complexity 1 34 0 6 1214 371 330 146 35 chr17 82454867 82455093 -12817558 - B4 SINE B4 -14 278 28 6 1214 1672 180 31 52 chr17 82455160 82455542 -12817109 - ORR1D1 LTR MaLR 0 374 1 6 1214 433 272 186 74 chr17 82456526 82456983 -12815668 + L1MEf LINE L1 969 1476 -5157 6 1214 423 0 0 0 chr17 82457289 82457336 -12815315 + (TATG)n Simple_repeat Simple_repeat 2 48 0 6 1214 437 348 12 31 chr17 82457354 82457514 -12815137 - RSINE1 SINE B4 -6 159 3 6 1214 225 0 0 0 chr17 82457575 82457600 -12815051 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 6 1214 1396 181 99 11 chr17 82457937 82458300 -12814351 - Lx9 LINE L1 0 7644 7250 6 1214 421 278 8 17 chr17 82458313 82458430 -12814221 + Lx9 LINE L1 7125 7240 -404 6 1214 240 243 28 14 chr17 82459625 82459696 -12812955 - MIRb SINE MIR -9 259 188 6 1214 937 270 215 33 chr17 82460725 82460849 -12811802 - L1_Rod LINE L1 -973 4874 4736 6 1214 333 0 0 0 chr17 82460849 82460886 -12811765 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 1214 937 270 215 33 chr17 82460886 82460955 -12811696 - L1_Rod LINE L1 -1112 4735 4639 6 1214 207 0 0 0 chr17 82460955 82460978 -12811673 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 6 1214 937 270 215 33 chr17 82460978 82461386 -12811265 - L1_Rod LINE L1 -1209 4638 4136 6 1214 297 0 0 0 chr17 82461386 82461419 -12811232 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 1214 315 0 0 0 chr17 82461419 82461453 -12811198 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1214 937 270 215 33 chr17 82461453 82461583 -12811068 - L1_Rod LINE L1 -1712 4135 4008 6 1214 278 238 63 18 chr17 82461641 82461793 -12810858 - L1M2 LINE L1 -2114 3766 3616 6 1214 1122 327 24 42 chr17 82461797 82462371 -12810280 + Lx9 LINE L1 6906 7469 -175 6 1214 21 0 0 0 chr17 82463021 82463042 -12809609 + AT_rich Low_complexity Low_complexity 1 21 0 6 1214 243 29 0 0 chr17 82463098 82463132 -12809519 + L1_Mur1 LINE L1 3815 3848 -2038 6 1214 2823 149 20 14 chr17 82463130 82463621 -12809030 + Lx3C LINE L1 5651 6144 -832 6 1214 3525 177 53 2 chr17 82463622 82464262 -12808389 + Lx3C LINE L1 6293 6965 -11 6 1214 22 35 0 0 chr17 82464271 82464300 -12808351 + AT_rich Low_complexity Low_complexity 1 29 0 6 1214 296 127 0 18 chr17 82466322 82466378 -12806273 + (TA)n Simple_repeat Simple_repeat 1 55 0 6 1214 288 237 26 13 chr17 82467074 82467151 -12805500 + MER89 LTR ERV1 1 78 -481 6 1214 1606 51 0 0 chr17 82468544 82468733 -12803918 + L1_Mus1 LINE L1 6216 6404 -163 6 1214 2111 45 0 43 chr17 82468733 82469010 -12803641 + L1_Mus1 LINE L1 6303 6567 0 6 1214 722 290 29 0 chr17 82469923 82470130 -12802521 + B3 SINE B2 3 215 -1 6 1214 2482 189 36 24 chr17 82470197 82470751 -12801900 - RLTR31_Mm LTR ERVK 0 561 1 6 1214 227 389 22 51 chr17 82473102 82473240 -12799411 - MTE2a LTR MaLR -4 415 282 6 1214 371 319 51 26 chr17 82473249 82473429 -12799222 - MTE2a LTR MaLR -243 176 1 6 1214 1410 292 146 13 chr17 82473527 82474075 -12798576 + Lx8 LINE L1 6852 7472 -1 6 1214 25 0 0 0 chr17 82474156 82474181 -12798470 + AT_rich Low_complexity Low_complexity 1 25 0 6 1214 377 273 37 21 chr17 82474186 82474377 -12798274 + L1M3 LINE L1 5204 5397 -743 6 1214 241 348 25 25 chr17 82474385 82474503 -12798148 + ORR1C2 LTR MaLR 3 120 -264 6 1214 269 281 30 46 chr17 82474710 82474830 -12797821 + L1M3 LINE L1 5684 5804 -508 6 1214 564 308 116 46 chr17 82475129 82475562 -12797089 + L1MB3 LINE L1 5539 6001 -170 6 1214 23 0 0 0 chr17 82476272 82476295 -12796356 + AT_rich Low_complexity Low_complexity 1 23 0 6 1214 592 347 156 16 chr17 82476393 82477022 -12795629 + MLT2B5 LTR ERVL 1 717 0 6 1214 467 283 57 0 chr17 82477153 82477312 -12795339 + ERVL-B4-int LTR ERVL 171 338 -5376 6 1214 302 308 62 93 chr17 82477342 82477471 -12795180 - MTD LTR MaLR -57 362 238 6 1214 2975 102 40 2 chr17 82477609 82478059 -12794592 + Lx3_Mus LINE L1 6543 7009 0 6 1214 429 290 26 46 chr17 82478718 82478870 -12793781 - MLT1A0 LTR MaLR -19 346 198 6 1214 244 138 0 30 chr17 82480097 82480164 -12792487 + CT-rich Low_complexity Low_complexity 2 66 0 6 1214 229 347 0 0 chr17 82480186 82480258 -12792393 + CT-rich Low_complexity Low_complexity 3 74 0 6 1214 501 62 0 0 chr17 82480277 82480342 -12792309 + (TCCC)n Simple_repeat Simple_repeat 3 67 0 6 1214 208 333 11 11 chr17 82480462 82480556 -12792095 + CT-rich Low_complexity Low_complexity 2 95 0 6 1214 206 372 29 14 chr17 82480734 82480873 -12791778 - MIR SINE MIR -13 249 109 6 1214 184 290 33 37 chr17 82481716 82481817 -12790834 - L2a LINE L2 -316 3110 3013 6 1214 513 32 0 0 chr17 82482582 82482645 -12790006 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 1214 888 324 99 65 chr17 82482800 82483397 -12789254 - RMER20B LTR ERVK 0 627 11 6 1214 8083 163 37 22 chr17 82483397 82484974 -12787677 + L1_Mur2 LINE L1 3983 5582 -295 6 1214 4383 168 42 1 chr17 82484967 82485731 -12786920 + Lx3C LINE L1 6151 6945 -31 6 1214 325 132 12 0 chr17 82485909 82485966 -12786685 + B1_Mur2 SINE Alu 87 146 -1 6 1214 209 108 0 26 chr17 82485968 82486006 -12786645 + (CAAAAA)n Simple_repeat Simple_repeat 5 41 0 6 1214 1913 248 36 59 chr17 82486126 82486251 -12786400 - Lx7 LINE L1 -7 7689 7567 6 1214 230 0 33 0 chr17 82486251 82486281 -12786370 + (TAA)n Simple_repeat Simple_repeat 2 32 0 6 1214 1913 248 36 59 chr17 82486281 82486768 -12785883 - Lx7 LINE L1 -130 7566 7091 6 1214 531 0 0 0 chr17 82486784 82486843 -12785808 + (TA)n Simple_repeat Simple_repeat 2 60 0 6 1214 1324 12 0 24 chr17 82486843 82487011 -12785640 - L1Md_F2 LINE L1 -21 6561 6398 6 1214 2446 50 0 0 chr17 82487007 82487305 -12785346 + L1Md_F2 LINE L1 6084 6381 -201 6 1214 1089 194 75 24 chr17 82487291 82487545 -12785106 - Lx7 LINE L1 -605 7091 6825 6 1214 303 274 16 66 chr17 82487762 82487883 -12784768 + MER53 DNA hAT 6 120 -73 6 1214 252 156 72 10 chr17 82488456 82488553 -12784098 + (TATAA)n Simple_repeat Simple_repeat 1 103 0 6 1214 228 222 27 14 chr17 82489132 82489205 -12783446 + GA-rich Low_complexity Low_complexity 3 76 0 6 1214 4826 34 41 0 chr17 82489271 82489861 -12782790 + L1Md_F3 LINE L1 5952 6565 -19 6 1214 23 97 0 0 chr17 82490485 82490557 -12782094 + AT_rich Low_complexity Low_complexity 1 72 0 7 1214 26 74 0 0 chr17 82490611 82490665 -12781986 + AT_rich Low_complexity Low_complexity 1 54 0 7 1214 294 273 7 126 chr17 82491085 82491236 -12781415 - Lx8 LINE L1 -1010 6463 6331 7 1214 1795 166 10 0 chr17 82491346 82491642 -12781009 - ORR1A2 LTR MaLR -8 319 21 7 1214 3694 67 0 10 chr17 82492822 82493307 -12779344 + L1Md_F2 LINE L1 6103 6582 0 7 1214 549 341 59 22 chr17 82493582 82493852 -12778799 - B4A SINE B4 -4 288 9 7 1214 230 248 86 80 chr17 82494959 82495121 -12777530 - RSINE1 SINE B4 0 165 3 7 1214 34 55 0 0 chr17 82495285 82495340 -12777311 + AT_rich Low_complexity Low_complexity 1 55 0 7 1214 338 298 35 7 chr17 82495672 82495811 -12776840 - L1_Mur3 LINE L1 -655 5657 5500 7 1214 1353 207 206 25 chr17 82496291 82496763 -12775888 + RLTR20B3 LTR ERVK 21 577 0 7 1214 36 40 0 0 chr17 82497645 82497695 -12774956 + AT_rich Low_complexity Low_complexity 1 50 0 7 1214 7638 176 75 83 chr17 82497841 82497991 -12774660 + MYSERV16_I-int LTR ERVK 1 148 -2178 7 1214 1302 61 83 6 chr17 82497991 82498172 -12774479 + B2_Mm2 SINE B2 1 195 0 7 1214 7638 176 75 83 chr17 82498172 82500000 -12772651 + MYSERV16_I-int LTR ERVK 149 1963 -363 7 1214 1430 189 52 3 chr17 82500000 82500329 -12772322 + MYSERV16_I-int LTR ERVK 1964 2308 -18 1 1214 1445 211 61 126 chr17 82500349 82500777 -12771874 + RLTR20B3 LTR ERVK 21 420 -157 1 1214 2390 132 80 5 chr17 82500791 82501193 -12771458 + Lx3B LINE L1 6537 6968 -5 2 1214 213 121 0 0 chr17 82501198 82501231 -12771420 + (TAA)n Simple_repeat Simple_repeat 1 33 0 3 1214 634 230 23 16 chr17 82501244 82501372 -12771279 + RLTR20B3 LTR ERVK 449 577 0 1 1214 24 32 0 0 chr17 82502088 82502119 -12770532 + AT_rich Low_complexity Low_complexity 1 31 0 4 1214 441 0 0 0 chr17 82502186 82502235 -12770416 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1214 360 0 0 0 chr17 82502235 82502274 -12770377 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 1214 21 57 0 0 chr17 82502361 82502396 -12770255 + AT_rich Low_complexity Low_complexity 1 35 0 7 1214 316 0 0 43 chr17 82503028 82503074 -12769577 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 8 1214 226 392 101 8 chr17 82504631 82504888 -12767763 + L2 LINE L2 2744 3024 -395 9 1214 751 258 81 0 chr17 82504889 82505075 -12767576 + B3 SINE B2 1 201 -15 1 1214 475 350 113 38 chr17 82505474 82505979 -12766672 + L1MC4a LINE L1 5512 6054 -1828 1 1214 216 214 0 0 chr17 82506488 82506530 -12766121 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1214 1057 190 104 31 chr17 82507579 82507867 -12764784 + Lx9 LINE L1 7316 7624 -20 1 1214 21 0 0 0 chr17 82507867 82507888 -12764763 + AT_rich Low_complexity Low_complexity 1 21 0 1 1214 2760 223 64 15 chr17 82507891 82508488 -12764163 - Lx5 LINE L1 -12 7038 6413 1 1214 724 115 0 16 chr17 82508870 82508994 -12763657 + Lx LINE L1 6528 6649 -5 1 1214 1887 239 170 54 chr17 82510948 82511715 -12760936 + Lx9 LINE L1 6649 7518 -126 1 1214 459 0 0 0 chr17 82511715 82511766 -12760885 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 1214 890 252 98 29 chr17 82511766 82511889 -12760762 + Lx9 LINE L1 7519 7636 -8 1 1214 279 0 0 0 chr17 82511975 82512006 -12760645 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 1214 216 0 0 0 chr17 82512006 82512030 -12760621 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1214 5568 197 26 32 chr17 82512776 82513806 -12758845 - Lx4B LINE L1 -19 6981 5936 2 1214 2275 73 31 19 chr17 82513806 82514127 -12758524 + IAPLTR2b LTR ERVK 1 325 -2 2 1214 5568 193 22 31 chr17 82514127 82514459 -12758192 - Lx4B LINE L1 -1123 5935 5608 2 1214 2351 113 0 0 chr17 82514459 82514785 -12757866 + ORR1A2 LTR MaLR 2 327 0 2 1214 5568 178 47 11 chr17 82514785 82515106 -12757545 - Lx4B LINE L1 -276 5610 5262 2 1214 207 0 0 0 chr17 82515106 82515129 -12757522 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1214 3404 178 47 11 chr17 82515129 82515191 -12757460 - Lx4B LINE L1 -625 5261 5200 2 1214 3569 175 20 27 chr17 82515179 82515924 -12756727 + Lx4B LINE L1 4491 5230 -647 2 1214 183 80 0 0 chr17 82515924 82515949 -12756702 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 2 1214 25128 148 21 14 chr17 82515949 82517700 -12754951 - Lx4A LINE L1 -14 7044 5245 2 1214 1685 234 12 188 chr17 82517700 82518440 -12754211 - RMER19C LTR ERVK -1 610 1 2 1214 25128 141 28 33 chr17 82518440 82521736 -12750915 - Lx4A LINE L1 -633 5244 2049 2 1214 360 0 0 0 chr17 82521736 82521776 -12750875 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1214 840 39 0 0 chr17 82521776 82521879 -12750772 + (GA)n Simple_repeat Simple_repeat 1 104 0 2 1214 25128 156 22 18 chr17 82521879 82523307 -12749344 - Lx4A LINE L1 -3829 2048 553 2 1214 1821 109 96 37 chr17 82524000 82524323 -12748328 + Lx LINE L1 6313 6654 0 3 1214 7961 46 7 6 chr17 82525574 82526617 -12746034 + L1Md_T LINE L1 4663 6411 -639 3 1214 8437 32 0 0 chr17 82526617 82527652 -12744999 + L1Md_T LINE L1 5587 6582 0 3 1214 2989 212 57 0 chr17 82527652 82528251 -12744400 + Lx5 LINE L1 6364 6996 -54 3 1214 186 150 0 0 chr17 82528603 82528643 -12744008 + (A)n Simple_repeat Simple_repeat 1 40 0 3 1214 1693 91 20 4 chr17 82528812 82529065 -12743586 - MusHAL1 LINE L1 -986 1726 1470 3 1214 2259 70 2 130 chr17 82529060 82529298 -12743353 + MusHAL1 LINE L1 1726 1960 -752 3 1214 1049 96 14 0 chr17 82529298 82529444 -12743207 + B1_Mus1 SINE Alu 1 148 0 3 1214 2259 70 2 130 chr17 82529444 82529619 -12743032 + MusHAL1 LINE L1 1961 2086 -626 3 1214 32 81 0 0 chr17 82530147 82530221 -12742430 + AT_rich Low_complexity Low_complexity 1 74 0 3 1214 201 182 0 22 chr17 82531500 82531545 -12741106 + T-rich Low_complexity Low_complexity 2 45 0 3 1214 1456 54 15 5 chr17 82531553 82531757 -12740894 - L1_Mus3 LINE L1 -4 6634 6429 3 1214 192 135 0 0 chr17 82532125 82532162 -12740489 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1214 629 140 17 47 chr17 82533259 82533431 -12739220 + GA-rich Low_complexity Low_complexity 4 170 0 4 1214 1560 244 86 32 chr17 82533511 82533952 -12738699 - RMER19C LTR ERVK 0 611 147 4 1214 351 0 0 0 chr17 82534068 82534107 -12738544 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1214 776 294 34 45 chr17 82534111 82534378 -12738273 - B4A SINE B4 -20 272 9 4 1214 1466 252 106 16 chr17 82535629 82536008 -12736643 - MTC LTR MaLR -8 413 1 4 1214 227 291 151 0 chr17 82536141 82536227 -12736424 - MLT1A1 LTR MaLR -21 353 255 4 1214 245 351 71 44 chr17 82536256 82536438 -12736213 - MLT1A1 LTR MaLR -219 189 3 4 1214 414 0 0 0 chr17 82536455 82536501 -12736150 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1214 188 345 111 14 chr17 82536707 82536851 -12735800 - MER5A DNA MER1_type -1 188 31 4 1214 864 340 31 55 chr17 82537192 82537575 -12735076 + MTE2b LTR MaLR 3 376 -3 4 1214 250 333 0 23 chr17 82538808 82538894 -12733757 + RSINE1 SINE B4 8 91 -74 4 1214 261 57 0 0 chr17 82538927 82538962 -12733689 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1214 357 333 80 11 chr17 82539318 82539506 -12733145 - L3 LINE CR1 -751 3738 3538 5 1214 930 211 25 9 chr17 82540503 82540897 -12731754 + Lx5 LINE L1 1003 1397 -4480 5 1214 3228 183 30 83 chr17 82540890 82541426 -12731225 + Lx5 LINE L1 2269 2795 -3082 5 1214 1538 27 21 0 chr17 82541426 82541613 -12731038 + B2_Mm1a SINE B2 2 192 -1 5 1214 3228 188 27 100 chr17 82541613 82542070 -12730581 + Lx5 LINE L1 2796 3146 -768 5 1214 1208 210 45 16 chr17 82542070 82542312 -12730339 + Lx2B LINE L1 6393 6641 -359 5 1214 4045 182 8 27 chr17 82542297 82543116 -12729535 + Lx5 LINE L1 4427 5230 -647 5 1214 6813 163 1 3 chr17 82543143 82544310 -12728341 - Lx7 LINE L1 -2062 5634 4473 5 1214 4728 176 27 1 chr17 82544313 82545161 -12727490 + Lx LINE L1 5784 6653 -1 5 1214 3067 175 22 35 chr17 82545161 82545431 -12727220 + Lx5 LINE L1 5288 5551 -326 5 1214 186 43 0 0 chr17 82545431 82545454 -12727197 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1214 6629 196 50 20 chr17 82545454 82546889 -12725762 + Lx5 LINE L1 5552 7039 -11 5 1214 387 0 0 0 chr17 82546889 82546932 -12725719 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 5 1214 33 25 0 0 chr17 82547306 82547346 -12725305 + AT_rich Low_complexity Low_complexity 1 40 0 5 1214 180 0 0 0 chr17 82547521 82547541 -12725110 + (T)n Simple_repeat Simple_repeat 1 20 0 6 1214 232 284 11 74 chr17 82547904 82547999 -12724652 - B3A SINE B2 -1 197 109 6 1214 254 325 13 0 chr17 82547938 82548015 -12724636 - B4 SINE B4 0 292 215 6 1214 6164 36 0 0 chr17 82548017 82548746 -12723905 - L1Md_T LINE L1 0 6582 5854 6 1214 1184 242 21 25 chr17 82549036 82549316 -12723335 - Lx6 LINE L1 -819 6641 6363 6 1214 2341 223 63 15 chr17 82549346 82549948 -12722703 + Lx6 LINE L1 5703 6333 -1127 6 1214 25 51 0 0 chr17 82550202 82550241 -12722410 + AT_rich Low_complexity Low_complexity 1 39 0 6 1214 26 82 0 0 chr17 82550267 82550328 -12722323 + AT_rich Low_complexity Low_complexity 1 61 0 6 1214 305 286 88 16 chr17 82550355 82550590 -12722061 - Lx9 LINE L1 -13 7631 7353 6 1214 295 237 246 0 chr17 82550662 82550780 -12721871 - Lx9 LINE L1 -424 7220 7074 6 1214 594 235 51 23 chr17 82550785 82551058 -12721593 + Lx5 LINE L1 4431 4709 -1431 6 1214 26 0 0 0 chr17 82552158 82552184 -12720467 + AT_rich Low_complexity Low_complexity 1 26 0 7 1214 606 232 19 26 chr17 82552203 82552358 -12720293 + Lx9 LINE L1 6614 6767 -877 7 1214 21 36 0 0 chr17 82552358 82552386 -12720265 + AT_rich Low_complexity Low_complexity 1 28 0 7 1214 1477 149 20 105 chr17 82552691 82553035 -12719616 - RLTR9C LTR ERVK -28 365 51 7 1214 760 242 142 148 chr17 82553023 82553775 -12718876 + RMER13B LTR ERVK 265 908 0 7 1214 26 50 0 0 chr17 82554058 82554098 -12718553 + AT_rich Low_complexity Low_complexity 1 40 0 7 1214 6608 190 87 11 chr17 82554099 82555678 -12716973 + Lx5 LINE L1 5352 7050 0 6 1214 525 327 44 10 chr17 82555704 82555908 -12716743 + B3 SINE B2 1 211 -5 7 1214 221 163 0 0 chr17 82557008 82557051 -12715600 + A-rich Low_complexity Low_complexity 1 43 0 7 1214 28 29 0 0 chr17 82557285 82557320 -12715331 + AT_rich Low_complexity Low_complexity 1 35 0 7 1214 277 238 16 0 chr17 82557365 82557428 -12715223 + (TATG)n Simple_repeat Simple_repeat 1 64 0 7 1214 1582 110 12 4 chr17 82557593 82557849 -12714802 + Lx LINE L1 6384 6641 -13 8 1214 858 70 0 0 chr17 82557850 82557964 -12714687 + (GAAAA)n Simple_repeat Simple_repeat 2 115 0 8 1214 232 362 56 28 chr17 82559275 82559383 -12713268 - MLT1F2 LTR MaLR -84 476 366 8 1214 1868 109 28 19 chr17 82559431 82559750 -12712901 + RLTRETN_Mm LTR ERVK 1 322 0 8 1214 1042 75 7 20 chr17 82560429 82560578 -12712073 - B2_Mm2 SINE B2 -33 162 16 8 1214 2114 62 24 7 chr17 82561170 82561464 -12711187 - L1_Mus3 LINE L1 0 6638 6340 8 1214 1230 321 77 35 chr17 82561613 82562262 -12710389 - Lx7 LINE L1 -600 7096 6421 8 1214 308 319 214 9 chr17 82562270 82562321 -12710330 + L1M2 LINE L1 4597 4655 -1488 8 1214 315 0 0 0 chr17 82562321 82562356 -12710295 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 1214 459 0 0 0 chr17 82562356 82562406 -12710245 + (GA)n Simple_repeat Simple_repeat 2 52 0 8 1214 308 319 214 9 chr17 82562406 82562568 -12710083 + L1M2 LINE L1 4656 4854 -1289 8 1214 36539 43 0 3 chr17 82562689 82569166 -12703485 - L1Md_T LINE L1 0 6585 30 9 1214 189 0 0 0 chr17 82569886 82569907 -12702744 + (GA)n Simple_repeat Simple_repeat 2 22 0 9 1214 772 301 91 54 chr17 82570152 82570503 -12702148 - MTE2b LTR MaLR -15 364 1 9 1214 474 264 96 0 chr17 82571467 82571645 -12701006 + L1_Mur1 LINE L1 796 990 -5992 9 1214 9971 153 34 27 chr17 82571636 82572597 -12700054 + L1_Mus2 LINE L1 3909 4882 -1001 9 1214 4008 78 4 0 chr17 82572597 82573122 -12699529 - L1_Mus2 LINE L1 -1 6565 6039 9 1214 9971 114 20 16 chr17 82573122 82574278 -12698373 + L1_Mus2 LINE L1 4883 6039 -527 9 1214 4068 175 28 20 chr17 82574274 82575137 -12697514 + Lx2B LINE L1 4812 5681 -196 9 151 4460 216 49 16 chr17 82575135 82576304 -12696347 + Lx2B LINE L1 5784 6990 -10 9 1215 29219 107 38 18 chr17 82576353 82582928 -12689723 - Lx3_Mus LINE L1 0 7009 45 9 1215 813 276 106 85 chr17 82583292 82583716 -12688935 - RMER5 LTR ERV1 -9 525 93 9 1215 442 106 0 41 chr17 82584107 82584205 -12688446 + (TCTCTG)n Simple_repeat Simple_repeat 3 96 0 9 1215 483 18 0 0 chr17 82584221 82584277 -12688374 + (TA)n Simple_repeat Simple_repeat 1 56 0 9 1215 283 372 38 48 chr17 82585241 82585450 -12687201 - MER74A LTR ERVL 0 558 352 1 1215 665 325 10 5 chr17 82585484 82585682 -12686969 - MER74A LTR ERVL -279 279 81 1 1215 241 358 18 35 chr17 82586259 82586372 -12686279 - MER90a LTR ERV1 -343 271 161 1 1215 952 200 68 41 chr17 82586506 82586725 -12685926 - URR1A DNA MER1_type -1 225 1 1 1215 430 319 26 42 chr17 82586725 82586905 -12685746 - RMER15 LTR ERVL -106 469 293 1 1215 1192 259 69 34 chr17 82587214 82587622 -12685029 + Lx8 LINE L1 6910 7331 -142 1 1215 424 289 38 23 chr17 82588946 82589077 -12683574 + ETnERV2-int LTR ERVK 7070 7202 -204 1 1215 312 312 50 7 chr17 82589566 82589705 -12682946 + MER92B LTR ERV1 492 636 0 1 1215 257 299 46 0 chr17 82589741 82589828 -12682823 + PB1D7 SINE Alu 24 114 -6 1 1215 186 43 0 0 chr17 82590066 82590089 -12682562 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1215 23 0 0 0 chr17 82590797 82590820 -12681831 + AT_rich Low_complexity Low_complexity 1 23 0 1 1215 365 170 0 11 chr17 82591317 82591406 -12681245 + CT-rich Low_complexity Low_complexity 2 89 0 1 1215 22 35 0 0 chr17 82592242 82592271 -12680380 + AT_rich Low_complexity Low_complexity 1 29 0 1 1215 500 268 47 16 chr17 82593274 82593403 -12679248 - ETnERV2-int LTR ERVK -204 7202 7070 1 1215 27 49 0 0 chr17 82593464 82593505 -12679146 + AT_rich Low_complexity Low_complexity 1 41 0 1 1215 738 192 0 15 chr17 82593717 82593849 -12678802 + B3 SINE B2 1 130 -86 1 1215 1003 282 74 9 chr17 82593907 82594233 -12678418 - MTE2b LTR MaLR -32 347 1 1 1215 194 0 0 37 chr17 82595606 82595633 -12677018 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1215 581 223 258 4 chr17 82595894 82596146 -12676505 - Lx6 LINE L1 -8 7452 7137 1 1215 403 234 36 108 chr17 82596272 82596411 -12676240 - RMER15 LTR ERVL -381 194 66 1 1215 544 210 24 12 chr17 82596431 82596595 -12676056 - Lx9 LINE L1 0 7644 7479 1 1215 183 129 0 0 chr17 82596595 82596626 -12676025 + (TATG)n Simple_repeat Simple_repeat 3 33 0 1 1215 510 129 0 0 chr17 82596681 82596766 -12675885 + (TA)n Simple_repeat Simple_repeat 2 86 0 1 1215 645 189 166 14 chr17 82596779 82597069 -12675582 - Lx9 LINE L1 -138 7506 7173 1 1215 320 191 12 0 chr17 82597535 82597619 -12675032 + (TA)n Simple_repeat Simple_repeat 2 86 0 1 1215 180 111 0 0 chr17 82599265 82599292 -12673359 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1215 587 225 231 0 chr17 82599343 82599512 -12673139 - MTD LTR MaLR -11 408 201 1 1215 2696 196 18 7 chr17 82599536 82600164 -12672487 - Lx2B LINE L1 -2 6974 6314 1 1215 2073 156 19 9 chr17 82600208 82600641 -12672010 + Lx2B LINE L1 5774 6210 -790 1 1215 437 264 247 0 chr17 82600645 82600823 -12671828 - MTD LTR MaLR -197 222 1 1 1215 531 121 0 0 chr17 82601235 82601334 -12671317 + (TC)n Simple_repeat Simple_repeat 1 99 0 1 1215 336 24 0 0 chr17 82601334 82601375 -12671276 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1215 25 0 0 0 chr17 82602799 82602824 -12669827 + AT_rich Low_complexity Low_complexity 1 25 0 1 1215 1235 200 201 10 chr17 82603186 82603484 -12669167 + ORR1B2 LTR MaLR 1 355 -12 1 1215 233 364 57 50 chr17 82604327 82604486 -12668165 + MLT1A LTR MaLR 200 359 -15 1 1215 341 321 124 5 chr17 82605194 82605388 -12667263 - L1M4 LINE L1 -1183 4963 4747 1 1215 363 331 118 0 chr17 82605461 82605630 -12667021 - B4 SINE B4 -96 196 8 1 1215 299 324 46 27 chr17 82606278 82606497 -12666154 + Lx8 LINE L1 6374 6596 -877 1 1215 28 0 0 0 chr17 82606602 82606630 -12666021 + AT_rich Low_complexity Low_complexity 1 28 0 1 1215 1603 260 98 42 chr17 82607008 82607623 -12665028 - Lx6 LINE L1 -17 7443 6795 1 1215 225 119 0 0 chr17 82607949 82607991 -12664660 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 1 1215 482 270 15 66 chr17 82608745 82608943 -12663708 + Lx9 LINE L1 7299 7486 -158 1 1215 21 0 0 0 chr17 82609065 82609086 -12663565 + AT_rich Low_complexity Low_complexity 1 21 0 1 1215 258 32 0 0 chr17 82609906 82609937 -12662714 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 1215 208 231 0 0 chr17 82611211 82611250 -12661401 + polypurine Low_complexity Low_complexity 3 41 0 1 1215 1271 89 39 5 chr17 82611922 82612125 -12660526 + L1_Mus3 LINE L1 6429 6638 0 1 1215 549 135 0 0 chr17 82612125 82612214 -12660437 + (GGA)n Simple_repeat Simple_repeat 2 90 0 1 1215 405 0 0 0 chr17 82612210 82612255 -12660396 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 1 1215 841 91 15 8 chr17 82612255 82612388 -12660263 + (GGGAA)n Simple_repeat Simple_repeat 2 135 0 1 1215 203 286 80 104 chr17 82612980 82613105 -12659546 - MIRm SINE MIR -144 132 11 1 1215 4800 64 0 5 chr17 82613158 82613786 -12658865 - L1Md_F3 LINE L1 -13 6571 5947 1 1215 221 325 12 48 chr17 82614822 82614906 -12657745 + B1F1 SINE Alu 13 93 -56 1 1215 1872 334 40 30 chr17 82616614 82617703 -12654948 + Lx9 LINE L1 6351 7467 -6 1 1215 317 346 87 64 chr17 82617871 82617966 -12654685 + ORR1E LTR MaLR 4 99 -260 1 1215 1104 82 0 7 chr17 82617966 82618114 -12654537 + B1_Mus1 SINE Alu 2 148 0 1 1215 317 346 87 64 chr17 82618114 82618237 -12654414 + ORR1E LTR MaLR 100 227 -132 1 1215 310 350 27 62 chr17 82619884 82620030 -12652621 + RSINE1 SINE B4 2 142 -23 1 1215 333 81 32 16 chr17 82620638 82620701 -12651950 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 1215 207 146 0 0 chr17 82621376 82621417 -12651234 + (TAA)n Simple_repeat Simple_repeat 1 41 0 1 1215 8547 21 0 0 chr17 82621962 82623403 -12649248 - L1Md_T LINE L1 0 6582 5142 1 1215 513 0 0 0 chr17 82624519 82624576 -12648075 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 1215 1846 167 68 3 chr17 82624576 82624930 -12647721 + ORR1C1 LTR MaLR 2 378 0 1 1215 353 377 58 58 chr17 82624946 82625292 -12647359 - ORR1E LTR MaLR -13 346 1 1 1215 448 262 188 0 chr17 82625292 82625434 -12647217 - MTE-int LTR MaLR -53 1527 1356 1 1215 293 145 53 0 chr17 82625455 82625531 -12647120 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 1 1215 247 259 17 0 chr17 82625538 82625596 -12647055 - MTE-int LTR MaLR -248 1332 1274 1 1215 6002 211 46 10 chr17 82626264 82627949 -12644702 - Lx5 LINE L1 -5 7045 5281 1 1215 1376 145 0 0 chr17 82627963 82628190 -12644461 - Lx3_Mus LINE L1 0 7009 6783 1 1215 5257 78 30 20 chr17 82628192 82629126 -12643525 + Lx3_Mus LINE L1 5438 6377 -632 1 1215 4477 175 33 24 chr17 82629113 82629684 -12642967 - Lx5 LINE L1 -578 5299 4729 1 1215 189 0 0 0 chr17 82629684 82629705 -12642946 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 1215 4477 175 33 24 chr17 82629705 82630101 -12642550 - Lx5 LINE L1 -1149 4728 4324 1 1215 1976 285 52 12 chr17 82630130 82631457 -12641194 - RMER1B Other Other -12 1054 1 1 1215 1723 164 60 20 chr17 82631612 82631961 -12640690 - L1_Mur2 LINE L1 -1539 4338 3976 1 1215 1369 159 152 0 chr17 82631966 82632242 -12640409 - ORR1B1 LTR MaLR -76 318 1 1 1215 30 27 0 0 chr17 82632337 82632374 -12640277 + AT_rich Low_complexity Low_complexity 1 37 0 1 1215 1313 354 53 29 chr17 82632507 82632943 -12639708 - MTE-int LTR MaLR -940 640 208 1 1215 233 29 29 0 chr17 82632943 82632977 -12639674 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1215 1313 354 53 29 chr17 82632977 82633165 -12639486 - MTE-int LTR MaLR -1373 207 1 1 1215 437 254 30 15 chr17 82633174 82633306 -12639345 - Lx8 LINE L1 -1129 6344 6211 1 1215 622 273 21 90 chr17 82633667 82633856 -12638795 - B3A SINE B2 -9 189 14 1 1215 303 28 0 0 chr17 82634154 82634190 -12638461 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1215 216 216 0 0 chr17 82634409 82634460 -12638191 + (TAA)n Simple_repeat Simple_repeat 2 52 0 1 1215 321 380 21 32 chr17 82634509 82634699 -12637952 + MTE2a LTR MaLR 10 197 -222 1 1215 321 89 0 0 chr17 82634716 82634761 -12637890 + (TC)n Simple_repeat Simple_repeat 1 45 0 1 1215 559 249 73 25 chr17 82634761 82634946 -12637705 + MTE2a LTR MaLR 158 419 0 1 1215 3401 33 2 0 chr17 82635149 82635544 -12637107 + MTA_Mm LTR MaLR 1 396 0 1 1215 293 326 69 72 chr17 82635546 82635726 -12636925 + MLT1E2 LTR MaLR 29 213 -292 1 1215 258 358 58 36 chr17 82635838 82635977 -12636674 + MLT1E2 LTR MaLR 326 467 0 1 1215 284 211 13 0 chr17 82636247 82636323 -12636328 + (CATA)n Simple_repeat Simple_repeat 2 78 0 1 1215 225 0 0 0 chr17 82637404 82637429 -12635222 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1215 515 29 0 0 chr17 82637432 82637500 -12635151 - L1Md_T LINE L1 0 6582 6515 1 1215 2297 112 28 14 chr17 82637773 82638136 -12634515 + RLTR9A LTR ERVK 1 368 0 1 1215 219 186 0 0 chr17 82638137 82638180 -12634471 + (TAA)n Simple_repeat Simple_repeat 3 45 0 1 1215 395 209 9 0 chr17 82638644 82638754 -12633897 + GA-rich Low_complexity Low_complexity 2 112 0 1 1215 7153 69 20 5 chr17 82640011 82641449 -12631202 - L1Md_F2 LINE L1 -2 6580 5116 1 1215 234 253 81 46 chr17 82642622 82642709 -12629942 - MER57D LTR ERV1 -34 377 288 1 1215 475 254 19 8 chr17 82643203 82643467 -12629184 + (TATG)n Simple_repeat Simple_repeat 1 267 0 1 1215 372 218 9 98 chr17 82643499 82643611 -12629040 + RMER12 LTR ERVK 758 859 -463 1 1215 321 257 63 107 chr17 82644445 82644608 -12628043 - Lx7 LINE L1 -1 7695 7524 1 1215 324 0 0 0 chr17 82644608 82644644 -12628007 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1215 705 242 28 18 chr17 82644644 82644833 -12627818 - Lx7 LINE L1 -173 7523 7234 1 1215 340 282 42 17 chr17 82646438 82646557 -12626094 - L1ME1 LINE L1 -25 6154 6033 1 1215 312 321 67 36 chr17 82646586 82646669 -12625982 - L1MDa LINE L1 -4171 2462 2374 1 1215 1896 215 22 85 chr17 82646669 82647268 -12625383 + RLTR31_Mm LTR ERVK 1 561 0 1 1215 312 321 67 36 chr17 82647268 82647378 -12625273 - L1MDa LINE L1 -4260 2373 2263 1 1215 1098 311 63 18 chr17 82647455 82647909 -12624742 - Lx8 LINE L1 -712 6761 6278 1 1215 510 61 0 0 chr17 82647920 82647986 -12624665 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 1215 192 125 0 0 chr17 82648364 82648396 -12624255 + (GTTTG)n Simple_repeat Simple_repeat 2 33 0 1 1215 287 194 28 0 chr17 82648411 82648483 -12624168 + CT-rich Low_complexity Low_complexity 3 76 0 1 1215 5274 139 15 66 chr17 82649333 82649714 -12622937 + MusHAL1 LINE L1 399 774 -1938 1 1215 1016 217 83 120 chr17 82649714 82650122 -12622529 - RLTR9C LTR ERVK 0 393 1 1 1215 5274 139 15 66 chr17 82650122 82650832 -12621819 + MusHAL1 LINE L1 775 1434 -1278 1 1215 215 273 0 25 chr17 82651646 82651725 -12620926 + (TA)n Simple_repeat Simple_repeat 2 78 0 1 1215 2257 236 51 2 chr17 82652319 82652867 -12619784 - RMER15 LTR ERVL 0 575 1 2 1215 405 294 74 34 chr17 82653092 82653268 -12619383 + MER58A DNA MER1_type 42 224 0 2 1215 736 65 19 0 chr17 82653809 82653916 -12618735 + (GGTTG)n Simple_repeat Simple_repeat 2 110 0 2 1215 278 289 87 0 chr17 82653970 82654074 -12618577 + PB1D10 SINE Alu 3 115 -2 2 1215 264 59 0 0 chr17 82654433 82654467 -12618184 + (TAA)n Simple_repeat Simple_repeat 2 35 0 2 1215 443 230 110 0 chr17 82654504 82654604 -12618047 + PB1D9 SINE Alu 2 112 -8 2 1215 723 24 0 0 chr17 82654916 82655001 -12617650 + (TTTC)n Simple_repeat Simple_repeat 1 85 0 2 1215 384 22 0 0 chr17 82655233 82655278 -12617373 + (CTTA)n Simple_repeat Simple_repeat 2 46 0 2 1215 392 346 15 30 chr17 82655278 82655412 -12617239 - B1F2 SINE Alu -12 137 6 2 1215 378 0 0 0 chr17 82655484 82655526 -12617125 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1215 612 314 16 31 chr17 82656148 82656173 -12616478 - B3A SINE B2 -5 193 171 2 1215 315 0 0 0 chr17 82656173 82656208 -12616443 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1215 612 314 16 31 chr17 82656208 82656376 -12616275 - B3A SINE B2 -28 170 3 2 1215 226 365 23 16 chr17 82656387 82656515 -12616136 - B1_Mur3 SINE Alu -8 141 13 2 1215 279 0 0 0 chr17 82657418 82657449 -12615202 + (TTG)n Simple_repeat Simple_repeat 3 33 0 2 1215 651 378 58 19 chr17 82660430 82660743 -12611908 + MLT2B3 LTR ERVL 184 508 -46 2 1215 23 0 0 0 chr17 82661174 82661197 -12611454 + AT_rich Low_complexity Low_complexity 1 23 0 2 1215 844 296 107 12 chr17 82661632 82661970 -12610681 - MTD LTR MaLR -2 417 48 2 1215 1091 95 7 0 chr17 82662680 82662827 -12609824 - B1_Mus1 SINE Alu 0 148 1 2 1215 226 67 44 0 chr17 82664563 82664608 -12608043 + (CAAAA)n Simple_repeat Simple_repeat 4 50 0 2 1215 26 0 0 0 chr17 82664701 82664727 -12607924 + AT_rich Low_complexity Low_complexity 1 26 0 2 1215 934 294 32 21 chr17 82664920 82665224 -12607427 + MTD LTR MaLR 5 310 -111 2 1215 4078 90 31 5 chr17 82665253 82665836 -12606815 - Lx3_Mus LINE L1 -348 6661 6064 2 1215 509 30 15 0 chr17 82665838 82665905 -12606746 + (TCCC)n Simple_repeat Simple_repeat 1 68 0 2 1215 2710 99 8 0 chr17 82665907 82666289 -12606362 + Lx3_Mus LINE L1 6625 7009 0 2 1215 476 284 20 26 chr17 82666299 82666430 -12606221 + B3A SINE B2 48 181 -17 2 1215 497 68 27 0 chr17 82666430 82666503 -12606148 + (CATA)n Simple_repeat Simple_repeat 2 76 0 2 1215 476 284 20 26 chr17 82666503 82666523 -12606128 + B3A SINE B2 182 198 0 2 1215 477 0 0 0 chr17 82666877 82666930 -12605721 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1215 577 74 0 21 chr17 82666990 82667087 -12605564 - L1_Mus3 LINE L1 0 6638 6544 2 1215 929 262 117 27 chr17 82667094 82667399 -12605252 + MTD LTR MaLR 87 407 0 2 1215 1033 234 75 44 chr17 82667872 82668167 -12604484 + RLTR20B1 LTR ERVK 249 552 -11 2 1215 227 347 160 20 chr17 82668314 82668464 -12604187 - LTR16A1 LTR ERVL -4 452 282 2 1215 1650 21 11 0 chr17 82668594 82668785 -12603866 - B2_Mm1a SINE B2 0 193 1 2 1215 680 267 93 27 chr17 82670646 82670766 -12601885 - Lx8 LINE L1 -2 7471 7352 2 1215 759 69 0 0 chr17 82670766 82670868 -12601783 + (TCTG)n Simple_repeat Simple_repeat 3 104 0 2 1215 680 267 93 27 chr17 82670868 82671005 -12601646 - Lx8 LINE L1 -122 7351 7197 2 1215 333 62 0 0 chr17 82671097 82671145 -12601506 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 2 1215 480 266 167 41 chr17 82671489 82671783 -12600868 - Lx9 LINE L1 -1 7643 7313 2 1215 529 206 10 0 chr17 82671827 82671929 -12600722 - B1_Mus2 SINE Alu -3 144 42 2 1215 258 239 29 29 chr17 82671868 82671937 -12600714 - MT2B LTR ERVL -344 257 189 2 1215 536 270 164 27 chr17 82671948 82672131 -12600520 - B3 SINE B2 0 216 9 2 1215 290 26 26 0 chr17 82672826 82672865 -12599786 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 2 1215 1081 228 0 74 chr17 82673432 82673808 -12598843 + RMER10B LTR ERVL 1 336 -62 2 1215 654 208 0 0 chr17 82673823 82673982 -12598669 + (TG)n Simple_repeat Simple_repeat 2 160 0 2 1215 31 26 0 0 chr17 82673999 82674037 -12598614 + AT_rich Low_complexity Low_complexity 1 38 0 2 1215 321 143 0 0 chr17 82674292 82674341 -12598310 - RMER10B LTR ERVL 0 398 350 2 1215 554 252 63 24 chr17 82675994 82676120 -12596531 + RSINE1 SINE B4 11 141 -24 2 1215 432 0 0 0 chr17 82676122 82676170 -12596481 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1215 376 255 29 19 chr17 82676765 82676869 -12595782 + RLTR23 LTR ERV1 324 428 -2 2 1215 919 152 19 0 chr17 82676898 82677056 -12595595 - URR1B DNA MER1_type 0 225 65 2 1215 1688 192 116 102 chr17 82677057 82677574 -12595077 + RLTR11A LTR ERVK 1 524 -4 2 1215 214 227 52 22 chr17 82677938 82678073 -12594578 + (TA)n Simple_repeat Simple_repeat 1 139 0 2 1215 1966 41 0 4 chr17 82679162 82679412 -12593239 + L1Md_T LINE L1 5365 5615 -541 2 1215 8331 33 0 2 chr17 82679412 82680398 -12592253 + L1Md_T LINE L1 5587 6570 -12 2 1215 23 0 0 0 chr17 82680398 82680421 -12592230 + AT_rich Low_complexity Low_complexity 1 23 0 2 1215 435 68 0 0 chr17 82680929 82680988 -12591663 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 2 1215 22 0 0 0 chr17 82681235 82681257 -12591394 + AT_rich Low_complexity Low_complexity 1 22 0 2 1215 1456 184 30 4 chr17 82681685 82682229 -12590422 + L1_Mur3 LINE L1 888 1513 -4364 2 1215 1512 244 4 42 chr17 82682585 82683085 -12589566 + L1_Mus1 LINE L1 859 1339 -5747 2 1215 15229 180 17 78 chr17 82683077 82683893 -12588758 + L1_Mus1 LINE L1 2507 3135 -2742 2 1215 3477 96 12 2 chr17 82683893 82684384 -12588267 + L1_Mus4 LINE L1 6134 6629 -7 2 1215 15229 156 12 80 chr17 82684384 82687930 -12584721 + L1_Mus1 LINE L1 3136 6567 0 2 1215 198 71 0 0 chr17 82687968 82687996 -12584655 + (A)n Simple_repeat Simple_repeat 1 28 0 2 1215 655 247 11 23 chr17 82687996 82688186 -12584465 + Lx5 LINE L1 5910 6111 -889 2 1215 258 348 126 58 chr17 82688350 82688731 -12583920 + MLT1A1 LTR MaLR 1 407 -1 2 1215 386 263 18 90 chr17 82690059 82690226 -12582425 + L1MC3 LINE L1 7302 7456 -329 2 1215 872 301 79 27 chr17 82690694 82691135 -12581516 + Lx8 LINE L1 4721 5184 -696 2 1215 2422 190 66 6 chr17 82691178 82691691 -12580960 + RMER19C LTR ERVK 1 544 -67 2 1215 1114 285 75 40 chr17 82691703 82692464 -12580187 + Lx8 LINE L1 5435 6254 -1219 2 1215 6524 116 3 41 chr17 82692466 82693586 -12579065 - Lx2 LINE L1 -452 6545 5515 2 1215 21 0 0 0 chr17 82694019 82694040 -12578611 + AT_rich Low_complexity Low_complexity 1 21 0 2 1215 665 148 0 0 chr17 82694497 82694612 -12578039 - Lx2 LINE L1 -31 6966 6852 2 1215 5275 86 10 21 chr17 82694608 82695381 -12577270 + Lx3_Mus LINE L1 5977 6741 -268 2 1215 1645 119 15 8 chr17 82695584 82695846 -12576805 + Lx3_Mus LINE L1 6738 7001 -8 2 1215 381 366 71 3 chr17 82695959 82696255 -12576396 - L1M5 LINE L1 -848 5298 4983 2 1215 202 89 21 43 chr17 82696271 82696318 -12576333 + (TTTG)n Simple_repeat Simple_repeat 1 46 0 2 1215 402 320 94 107 chr17 82696332 82696734 -12575917 - L1M5 LINE L1 -1163 4983 4587 2 1215 1126 122 0 12 chr17 82698358 82698524 -12574127 - Lx LINE L1 -378 6276 6113 2 1215 1847 129 0 7 chr17 82698524 82698804 -12573847 + Lx LINE L1 6377 6654 0 2 1215 386 182 13 13 chr17 82699497 82699575 -12573076 - Lx4B LINE L1 -406 6652 6575 2 1215 4734 161 25 14 chr17 82699545 82700940 -12571711 - Lx4B LINE L1 -653 6405 4988 2 1215 1534 148 36 4 chr17 82700936 82701213 -12571438 - Lx4B LINE L1 -1382 4495 4210 2 1215 325 348 104 26 chr17 82701696 82701888 -12570763 - RMER15 LTR ERVL -22 553 347 2 1215 200 332 0 40 chr17 82702552 82702683 -12569968 + MIR3 SINE MIR 67 187 -21 2 1215 232 231 60 60 chr17 82703127 82703210 -12569441 - L2 LINE L2 -470 2949 2867 2 1215 2212 189 2 22 chr17 82703902 82704308 -12568343 - MTB_Mm LTR MaLR -8 399 2 2 1215 1557 329 54 46 chr17 82705006 82705879 -12566772 + Lx8 LINE L1 6245 7124 -349 2 1216 438 343 0 0 chr17 82706661 82706795 -12565856 - B1_Mur1 SINE Alu -14 135 2 2 1216 695 268 86 26 chr17 82707188 82707537 -12565114 - L1MA4 LINE L1 -363 5937 5568 2 1216 202 234 0 0 chr17 82707609 82707656 -12564995 + A-rich Low_complexity Low_complexity 1 47 0 2 1216 757 229 109 8 chr17 82708673 82708909 -12563742 + Lx9 LINE L1 7373 7634 -10 2 1216 207 0 0 0 chr17 82708909 82708932 -12563719 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1216 1348 227 83 59 chr17 82709109 82709378 -12563273 + ORR1C2 LTR MaLR 1 283 -101 2 1216 4163 59 40 9 chr17 82709378 82709921 -12562730 - LTRIS2 LTR ERV1 0 564 5 2 1216 1348 227 83 59 chr17 82709921 82710026 -12562625 + ORR1C2 LTR MaLR 284 384 0 2 1216 3015 176 16 23 chr17 82710397 82710971 -12561680 - RMER15 LTR ERVL -5 570 1 2 1216 5281 117 45 22 chr17 82711155 82712036 -12560615 + RLTR13D6 LTR ERVK 1 902 0 2 1216 663 293 22 33 chr17 82712118 82712298 -12560353 - B3 SINE B2 -34 182 5 2 1216 304 300 144 15 chr17 82713058 82713190 -12559461 + MLT1H-int LTR MaLR 144 292 -1117 2 1216 357 75 0 0 chr17 82713561 82713614 -12559037 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 1216 703 308 9 61 chr17 82713731 82713945 -12558706 + MTE2a LTR MaLR 19 221 -158 2 1216 771 194 0 14 chr17 82714281 82714422 -12558229 - B1_Mus2 SINE Alu 0 147 9 2 1216 250 338 25 56 chr17 82714482 82714642 -12558009 - RSINE1 SINE B4 -9 156 2 2 1216 221 128 21 21 chr17 82715273 82715321 -12557330 + (TAA)n Simple_repeat Simple_repeat 2 49 0 2 1216 265 95 0 0 chr17 82715372 82715414 -12557237 + B1_Mus2 SINE Alu 106 147 0 2 1216 942 58 0 0 chr17 82715423 82715544 -12557107 + (GGAGAA)n Simple_repeat Simple_repeat 5 125 0 2 1216 183 241 67 33 chr17 82715740 82715751 -12556900 + MER5A DNA MER1_type 3 15 -174 2 1216 209 348 54 11 chr17 82715751 82715844 -12556807 - MER5A DNA MER1_type -2 187 91 2 1216 390 21 0 0 chr17 82715946 82715993 -12556658 + (CTAA)n Simple_repeat Simple_repeat 2 48 0 2 1216 454 326 0 0 chr17 82716093 82716228 -12556423 + Lx7 LINE L1 7131 7265 -431 2 1216 963 57 0 0 chr17 82716797 82716919 -12555732 - B2_Mm2 SINE B2 -73 122 1 2 1216 307 207 33 103 chr17 82718252 82718380 -12554271 - B1_Mm SINE Alu -2 145 1 2 1216 23 0 0 0 chr17 82718429 82718452 -12554199 + AT_rich Low_complexity Low_complexity 1 23 0 3 1216 297 0 0 0 chr17 82718486 82718519 -12554132 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1216 266 359 46 35 chr17 82719350 82719523 -12553128 + MIR SINE MIR 51 225 -37 3 1216 507 336 0 0 chr17 82722060 82722191 -12550460 - RSINE1 SINE B4 0 165 35 3 1216 208 105 53 0 chr17 82722191 82722229 -12550422 + T-rich Low_complexity Low_complexity 3 42 0 3 1216 533 55 14 0 chr17 82723186 82723259 -12549392 + (TAGA)n Simple_repeat Simple_repeat 4 77 0 3 1216 447 323 153 26 chr17 82723260 82723568 -12549083 + Lx9 LINE L1 6344 6690 -954 3 1216 562 301 60 70 chr17 82723551 82723851 -12548800 + Lx9 LINE L1 6834 7130 -514 3 1216 542 287 69 0 chr17 82723919 82724121 -12548530 + Lx9 LINE L1 7301 7516 -128 3 1216 233 251 20 116 chr17 82724136 82724334 -12548317 + Lx9 LINE L1 7458 7636 -8 3 1216 712 252 0 0 chr17 82724348 82724487 -12548164 + B1_Mm SINE Alu 2 140 -7 3 1216 21 0 0 0 chr17 82724911 82724932 -12547719 + AT_rich Low_complexity Low_complexity 1 21 0 3 1216 2052 112 72 6 chr17 82726202 82726535 -12546116 - Lx LINE L1 -11 6643 6289 3 1216 252 353 108 22 chr17 82726692 82726831 -12545820 - ORR1E LTR MaLR -208 151 1 3 1216 180 0 0 0 chr17 82726832 82726852 -12545799 + (CAAAC)n Simple_repeat Simple_repeat 2 21 0 3 1216 262 372 32 32 chr17 82727040 82727165 -12545486 + MIR SINE MIR 9 133 -129 3 1216 255 350 60 60 chr17 82728134 82728283 -12544368 - RSINE1 SINE B4 0 165 17 3 1216 207 0 0 0 chr17 82728383 82728406 -12544245 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1216 1283 170 43 40 chr17 82728673 82728974 -12543677 + Lx7 LINE L1 7395 7696 0 3 1216 660 266 7 14 chr17 82728999 82729144 -12543507 + B1_Mur1 SINE Alu 6 149 0 3 1216 822 283 78 57 chr17 82730478 82731053 -12541598 - Lx8 LINE L1 -1298 6398 5784 3 1216 1225 21 7 0 chr17 82731122 82731267 -12541384 + B1_Mm SINE Alu 1 146 -1 3 1216 204 40 0 0 chr17 82731281 82731306 -12541345 + (A)n Simple_repeat Simple_repeat 1 25 0 3 1216 255 305 137 0 chr17 82732004 82732099 -12540552 - LTR52 LTR ERVL -37 384 277 3 1216 368 336 97 0 chr17 82733712 82733825 -12538826 + RSINE1 SINE B4 9 132 -33 3 1216 267 31 0 0 chr17 82733839 82733871 -12538780 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1216 773 99 8 0 chr17 82733880 82734001 -12538650 + (TC)n Simple_repeat Simple_repeat 1 122 0 3 1216 735 244 41 10 chr17 82734534 82734729 -12537922 + Lx7 LINE L1 7040 7240 -456 3 1216 3061 163 12 62 chr17 82734990 82736015 -12536636 + L1VL4 LINE L1 199 1160 -2399 3 1216 4458 166 16 22 chr17 82736015 82736829 -12535822 + Lx2 LINE L1 6189 6997 0 3 1216 528 16 0 0 chr17 82736967 82737028 -12535623 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 3 1216 228 250 171 29 chr17 82737290 82737430 -12535221 - Lx7 LINE L1 0 7696 7537 3 1216 275 140 20 20 chr17 82737553 82737604 -12535047 - Lx7 LINE L1 -359 7337 7287 3 1216 324 326 0 0 chr17 82738004 82738102 -12534549 - Lx9 LINE L1 -289 7355 7258 3 1216 225 196 0 0 chr17 82738099 82738150 -12534501 + Lx9 LINE L1 7583 7633 -11 3 1216 375 105 0 0 chr17 82738155 82738212 -12534439 + (TA)n Simple_repeat Simple_repeat 2 58 0 3 1216 418 39 0 0 chr17 82739519 82739570 -12533081 + B1_Mm SINE Alu 89 139 -8 3 1216 200 59 29 0 chr17 82739570 82739604 -12533047 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1216 673 326 142 93 chr17 82743541 82743759 -12528892 + MTE2a LTR MaLR 1 232 -187 3 1216 297 0 0 0 chr17 82743759 82743792 -12528859 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1216 852 44 0 0 chr17 82743792 82743904 -12528747 + (GA)n Simple_repeat Simple_repeat 1 113 0 3 1216 673 336 112 35 chr17 82743904 82744080 -12528571 + MTE2a LTR MaLR 194 374 -5 3 1216 477 125 0 50 chr17 82744102 82744203 -12528448 - Lx LINE L1 -6 6648 6553 3 1216 4134 117 48 5 chr17 82744203 82744293 -12528358 - Lx LINE L1 -30 6624 6521 3 1216 183 42 0 0 chr17 82744293 82744317 -12528334 + (CCCA)n Simple_repeat Simple_repeat 1 24 0 3 1216 4134 117 48 5 chr17 82744317 82744846 -12527805 - Lx LINE L1 -134 6520 5979 3 1216 270 326 70 0 chr17 82744846 82744932 -12527719 + RSINE1 SINE B4 33 124 -41 3 1216 243 146 0 0 chr17 82745013 82745054 -12527597 + (TATG)n Simple_repeat Simple_repeat 2 42 0 3 1216 414 315 52 37 chr17 82745194 82745385 -12527266 + B3A SINE B2 4 197 -1 3 1216 524 200 0 7 chr17 82745981 82746117 -12526534 + CT-rich Low_complexity Low_complexity 1 135 0 3 1216 367 352 50 89 chr17 82746491 82746772 -12525879 + MLT1E3 LTR MaLR 321 590 -34 3 1216 5720 68 53 4 chr17 82747016 82747810 -12524841 + L1_Mur1 LINE L1 4797 5629 -257 3 1216 784 233 49 118 chr17 82747991 82748392 -12524259 + RMER16 LTR ERVK 1 498 -35 3 1216 2110 151 185 16 chr17 82748488 82748974 -12523677 + RMER17C-int LTR ERVK 2671 3238 0 3 1216 1435 177 65 41 chr17 82748977 82749411 -12523240 + RMER17C LTR ERVK 25 439 -519 3 1216 278 304 54 0 chr17 82750390 82750402 -12522249 - B4A SINE B4 -190 102 91 3 1216 252 0 0 0 chr17 82750402 82750430 -12522221 + (TTG)n Simple_repeat Simple_repeat 2 29 0 3 1216 278 304 54 0 chr17 82750430 82750509 -12522142 - B4A SINE B4 -202 90 7 3 1216 270 0 0 0 chr17 82750594 82750624 -12522027 + (TC)n Simple_repeat Simple_repeat 1 30 0 3 1216 345 47 0 0 chr17 82750625 82750668 -12521983 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 1216 189 0 0 0 chr17 82750668 82750688 -12521963 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1216 264 236 168 9 chr17 82750689 82750796 -12521855 - Lx8 LINE L1 -1567 5906 5783 3 1216 759 303 50 65 chr17 82750826 82750840 -12521811 - B4A SINE B4 -10 282 270 3 1216 387 0 0 0 chr17 82750840 82750883 -12521768 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1216 759 303 50 65 chr17 82750883 82751147 -12521504 - B4A SINE B4 -23 269 8 3 1216 302 344 166 9 chr17 82751139 82751368 -12521283 + MLT1F LTR MaLR 189 453 -95 3 1216 49 87 0 0 chr17 82751472 82751598 -12521053 + AT_rich Low_complexity Low_complexity 1 126 0 3 1216 292 333 114 13 chr17 82752158 82752307 -12520344 + RSINE1 SINE B4 2 165 0 3 1216 543 319 69 41 chr17 82752350 82752595 -12520056 + B4 SINE B4 1 252 -40 3 1216 2844 194 45 55 chr17 82752915 82753993 -12518658 + L1_Mur1 LINE L1 709 1782 -2132 3 1216 225 213 0 0 chr17 82753996 82754043 -12518608 + L1_Mur1 LINE L1 1930 1976 -3910 3 1216 24165 164 20 20 chr17 82755406 82759397 -12513254 + Lx3C LINE L1 745 4739 -1147 3 1216 214 26 25 50 chr17 82759397 82759437 -12513214 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 1216 24165 169 23 27 chr17 82759437 82761519 -12511132 + Lx3C LINE L1 4740 6818 -158 3 1216 741 277 43 19 chr17 82761696 82761906 -12510745 + B3 SINE B2 2 216 0 3 1216 573 129 0 0 chr17 82762815 82762908 -12509743 + (TTCC)n Simple_repeat Simple_repeat 2 94 0 3 1216 331 360 96 46 chr17 82763381 82763923 -12508728 - L1M3a LINE L1 -4823 1561 993 3 1216 449 350 59 39 chr17 82764691 82765048 -12507603 - L1M3a LINE L1 -5512 791 428 3 1216 237 196 0 0 chr17 82765130 82765186 -12507465 + (TA)n Simple_repeat Simple_repeat 2 57 0 3 1216 1182 75 0 0 chr17 82766708 82766855 -12505796 + B1_Mus2 SINE Alu 1 147 0 3 1216 279 0 0 0 chr17 82766858 82766889 -12505762 + (GA)n Simple_repeat Simple_repeat 2 32 0 3 1216 1132 200 0 53 chr17 82767282 82767525 -12505126 + RMER4A LTR ERVK 1 230 -236 3 1216 771 130 0 0 chr17 82767525 82767648 -12505003 + (TATATG)n Simple_repeat Simple_repeat 3 125 0 3 1216 213 167 24 0 chr17 82767680 82767722 -12504929 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 1216 1024 189 22 54 chr17 82767724 82767818 -12504833 + RMER4A LTR ERVK 250 345 -121 3 1216 405 0 0 0 chr17 82767818 82767863 -12504788 + (TC)n Simple_repeat Simple_repeat 2 46 0 3 1216 470 79 13 0 chr17 82767863 82767938 -12504713 + (TG)n Simple_repeat Simple_repeat 2 78 0 3 1216 1024 189 22 54 chr17 82767938 82768066 -12504585 + RMER4A LTR ERVK 346 465 -1 3 1216 262 376 0 0 chr17 82768066 82768157 -12504494 + B4 SINE B4 133 223 -69 3 1216 260 369 8 8 chr17 82769084 82769207 -12503444 - MLT1J-int LTR MaLR -156 1231 1109 3 1216 22 0 0 0 chr17 82769344 82769366 -12503285 + AT_rich Low_complexity Low_complexity 1 22 0 3 1216 22 70 0 0 chr17 82769455 82769498 -12503153 + AT_rich Low_complexity Low_complexity 1 43 0 3 1216 232 220 40 0 chr17 82770845 82770895 -12501756 + CT-rich Low_complexity Low_complexity 4 55 0 3 1216 21 0 0 0 chr17 82770920 82770941 -12501710 + AT_rich Low_complexity Low_complexity 1 21 0 3 1216 10017 87 18 6 chr17 82770983 82772462 -12500189 - Lx3_Mus LINE L1 -8 7001 5509 3 1216 201 278 19 0 chr17 82772466 82772520 -12500131 - MIRc SINE MIR -36 232 178 3 1216 663 219 185 0 chr17 82773084 82773262 -12499389 + MTD LTR MaLR 209 419 0 3 1216 23 0 0 0 chr17 82774339 82774362 -12498289 + AT_rich Low_complexity Low_complexity 1 23 0 3 1216 453 341 43 21 chr17 82774704 82774890 -12497761 - B3A SINE B2 0 198 9 3 1216 317 350 93 69 chr17 82775475 82775807 -12496844 + MLT1E2 LTR MaLR 53 392 -235 3 1216 2207 166 19 0 chr17 82775836 82776209 -12496442 - RMER19B LTR ERVK -522 380 1 3 1216 651 314 19 10 chr17 82776209 82776415 -12496236 - Lx8 LINE L1 -831 6642 6435 3 1216 327 254 14 40 chr17 82776420 82776494 -12496157 - PB1D10 SINE Alu -8 109 38 3 1216 272 220 0 33 chr17 82776446 82776507 -12496144 - 4.5SRNA scRNA scRNA -11 83 25 3 1216 1911 188 45 85 chr17 82776515 82776901 -12495750 + RMER19B LTR ERVK 334 692 -210 3 1216 306 0 0 0 chr17 82776901 82776935 -12495716 + (CTG)n Simple_repeat Simple_repeat 1 34 0 3 1216 1911 188 45 85 chr17 82776935 82776996 -12495655 + RMER19B LTR ERVK 693 762 -140 3 1216 505 164 0 26 chr17 82776997 82777013 -12495638 + polypyrimidine Low_complexity Low_complexity 97 112 0 3 1216 1294 61 0 16 chr17 82777013 82777196 -12495455 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 1216 505 164 0 26 chr17 82777196 82777292 -12495359 + CT-rich Low_complexity Low_complexity 3 96 0 3 1216 1052 103 7 0 chr17 82777343 82777489 -12495162 - B1_Mus1 SINE Alu 0 148 2 3 1216 709 115 129 16 chr17 82777490 82777614 -12495037 + RMER19B LTR ERVK 765 902 0 3 1216 1904 297 61 66 chr17 82777618 82777961 -12494690 + Lx8 LINE L1 6641 6966 -507 3 1216 258 32 0 0 chr17 82777961 82777992 -12494659 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 1216 1658 297 61 66 chr17 82777992 82778467 -12494184 + Lx8 LINE L1 6967 7455 -18 3 1216 2060 88 23 70 chr17 82778697 82779240 -12493411 + RLTR45 LTR ERVK 2 474 -8 4 1216 21 36 0 0 chr17 82779267 82779295 -12493356 + AT_rich Low_complexity Low_complexity 1 28 0 4 1216 23 92 0 0 chr17 82781162 82781227 -12491424 + AT_rich Low_complexity Low_complexity 1 65 0 4 1216 253 282 0 0 chr17 82781361 82781432 -12491219 + Lx8 LINE L1 6973 7043 -430 4 1216 3486 161 52 23 chr17 82781432 82782082 -12490569 + RLTR17 LTR ERVK 1 669 -23 4 1216 238 175 0 0 chr17 82782132 82782172 -12490479 + RMER3D2 LTR ERVK 364 403 -187 4 1216 307 296 79 16 chr17 82782296 82782423 -12490228 + Lx8 LINE L1 7058 7192 -281 4 1216 30 45 0 0 chr17 82782938 82782982 -12489669 + AT_rich Low_complexity Low_complexity 1 44 0 4 1216 191 146 0 24 chr17 82783011 82783053 -12489598 + (TA)n Simple_repeat Simple_repeat 1 41 0 4 1216 23 0 0 0 chr17 82783062 82783085 -12489566 + AT_rich Low_complexity Low_complexity 1 23 0 4 1216 402 21 0 0 chr17 82783520 82783567 -12489084 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1216 2880 180 75 137 chr17 82783636 82784572 -12488079 - RLTR13D6 LTR ERVK -7 886 15 4 1216 1685 105 8 4 chr17 82784777 82785035 -12487616 - Lx2A1 LINE L1 -179 6829 6571 4 1216 665 151 47 27 chr17 82785035 82785185 -12487466 + Lx2A1 LINE L1 6842 6994 -14 4 1216 1859 76 0 0 chr17 82785308 82785546 -12487105 - L1_Mus1 LINE L1 -3 6564 6327 4 1216 516 322 77 0 chr17 82786282 82786425 -12486226 + RSINE1 SINE B4 12 165 0 4 1216 787 197 7 0 chr17 82787626 82787778 -12484873 - MTC LTR MaLR -264 157 5 4 1216 22 70 0 0 chr17 82788157 82788200 -12484451 + AT_rich Low_complexity Low_complexity 1 43 0 4 1216 298 175 0 95 chr17 82788200 82788263 -12484388 + MTC LTR MaLR 105 161 -260 4 1216 30 45 0 0 chr17 82788292 82788336 -12484315 + AT_rich Low_complexity Low_complexity 1 44 0 4 1216 3291 43 2 5 chr17 82788377 82788774 -12483877 - MTA_Mm LTR MaLR 0 396 1 4 1216 449 317 54 6 chr17 82788980 82789148 -12483503 + MER58A DNA MER1_type 48 223 -1 4 1216 36951 30 7 6 chr17 82789398 82795543 -12477108 - L1Md_A LINE L1 0 6582 440 4 1216 646 295 40 43 chr17 82796079 82796380 -12476271 + Lx8 LINE L1 6649 6948 -525 4 1216 320 321 55 0 chr17 82797264 82797373 -12475278 + L2a LINE L2 3304 3418 -8 4 1216 653 0 0 13 chr17 82797974 82798052 -12474599 + (GAA)n Simple_repeat Simple_repeat 2 78 0 4 1216 309 330 21 0 chr17 82798391 82798485 -12474166 + ERVL-E-int LTR ERVL 4822 4917 -750 4 1216 226 316 79 29 chr17 82798671 82798811 -12473840 + RLTR22_Mus LTR ERVK 1550 1696 -112 4 1216 270 132 0 0 chr17 82798848 82798901 -12473750 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1216 426 20 0 0 chr17 82799109 82799160 -12473491 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1216 6047 144 62 14 chr17 82799423 82800555 -12472096 + RMER16-int LTR ERVK 1365 2550 -2856 4 1216 897 163 102 0 chr17 82800556 82800752 -12471899 + Lx3B LINE L1 6742 6957 -16 4 1216 2034 183 22 0 chr17 82800801 82801206 -12471445 + Lx5 LINE L1 5350 5763 -114 4 1216 378 225 55 85 chr17 82801206 82801371 -12471280 - RNLTR23 LTR ERVK -4 638 479 4 1216 1802 166 9 0 chr17 82801657 82801989 -12470662 + Lx5 LINE L1 5760 6094 -956 4 1216 1964 214 9 25 chr17 82801993 82802434 -12470217 + Lx5 LINE L1 6532 6965 -85 4 1216 608 299 109 23 chr17 82803180 82803529 -12469122 + Lx8 LINE L1 7095 7473 0 4 1216 207 0 0 0 chr17 82804175 82804198 -12468453 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1216 3525 10 5 0 chr17 82804239 82804633 -12468018 + MTA_Mm LTR MaLR 1 396 0 4 1216 21 36 0 0 chr17 82805481 82805509 -12467142 + AT_rich Low_complexity Low_complexity 1 28 0 4 1216 2586 233 72 42 chr17 82805599 82806335 -12466316 - Lx6 LINE L1 -6 7454 6697 4 1216 340 278 18 148 chr17 82806536 82806705 -12465946 - ORR1D2 LTR MaLR 0 370 224 4 1216 7748 145 18 53 chr17 82806740 82806907 -12465744 - Lx2A LINE L1 -6 7002 6878 4 1216 186 43 0 0 chr17 82806907 82806930 -12465721 + (CCCA)n Simple_repeat Simple_repeat 1 23 0 4 1216 7748 160 21 31 chr17 82806930 82809188 -12463463 - Lx2A LINE L1 -131 6877 4595 4 1216 1121 117 11 0 chr17 82810235 82810414 -12462237 - Lx2A LINE L1 -1268 4615 4435 4 1216 2130 166 68 2 chr17 82810615 82810840 -12461811 + L1VL4 LINE L1 501 725 -5577 4 1216 584 142 35 0 chr17 82810840 82810953 -12461698 - Lx LINE L1 -6 6648 6532 4 1216 5774 136 16 9 chr17 82810953 82812134 -12460517 + L1VL4 LINE L1 726 1940 -1619 4 1216 288 292 44 11 chr17 82812134 82812224 -12460427 - ORR1D2 LTR MaLR -230 129 37 4 1216 24 32 0 0 chr17 82812366 82812397 -12460254 + AT_rich Low_complexity Low_complexity 1 31 0 4 1216 1036 321 74 3 chr17 82813483 82813836 -12458815 + MTE2a LTR MaLR 1 378 -1 4 1216 240 428 79 14 chr17 82813857 82813997 -12458654 + LTR16D LTR ERVL 51 199 -452 4 1216 233 308 138 91 chr17 82814050 82814282 -12458369 + LTR16D LTR ERVL 307 549 -102 4 1216 34925 32 2 7 chr17 82814305 82819440 -12453211 + L1Md_T LINE L1 483 5585 -298 4 1216 8434 34 0 0 chr17 82819441 82820436 -12452215 + L1Md_T LINE L1 5587 6581 -1 4 1216 198 71 0 0 chr17 82820493 82820521 -12452130 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1216 1000 82 7 0 chr17 82820774 82820909 -12451742 + B1_Mus1 SINE Alu 7 142 -6 4 1216 341 40 40 0 chr17 82820910 82820960 -12451691 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 4 1216 379 205 0 0 chr17 82820981 82821059 -12451592 - L1_Mur2 LINE L1 -360 5517 5440 4 1216 755 150 0 0 chr17 82821061 82821188 -12451463 + L1_Mur2 LINE L1 5565 5691 -186 4 1216 7567 66 0 1 chr17 82821185 82822394 -12450257 + L1_Mus1 LINE L1 5358 6565 -2 4 1216 24 0 0 0 chr17 82823471 82823495 -12449156 + AT_rich Low_complexity Low_complexity 1 24 0 4 1216 1624 118 213 9 chr17 82823952 82824276 -12448375 + Lx2 LINE L1 6607 6996 -1 4 1216 43 20 0 0 chr17 82824276 82824326 -12448325 + AT_rich Low_complexity Low_complexity 1 50 0 4 1216 1056 299 53 8 chr17 82828664 82829025 -12443626 - MTEa LTR MaLR 0 379 3 4 1216 4565 217 52 20 chr17 82830294 82830927 -12441724 - Lx5 LINE L1 -149 6909 6220 4 1216 2670 36 78 6 chr17 82830927 82831260 -12441391 + IAPEY2_LTR LTR ERVK 1 357 0 4 1216 4565 208 37 17 chr17 82831260 82832074 -12440577 - Lx5 LINE L1 -831 6219 5375 4 1216 4674 185 47 90 chr17 82832529 82833720 -12438931 - Lx5 LINE L1 -514 5369 4239 4 1216 490 87 0 0 chr17 82833720 82833789 -12438862 - B1_Mus1 SINE Alu -79 69 1 4 1216 4674 185 47 90 chr17 82833789 82833930 -12438721 - Lx5 LINE L1 -514 4238 4104 4 1216 270 0 0 0 chr17 82833945 82833975 -12438676 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1216 3935 152 64 18 chr17 82833975 82834961 -12437690 - Lx5 LINE L1 -3830 2047 940 4 1216 306 0 0 0 chr17 82834968 82835002 -12437649 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1216 989 110 14 0 chr17 82835002 82835140 -12437511 - B1_Mus1 SINE Alu -7 141 2 4 1216 1282 183 98 69 chr17 82835140 82835274 -12437377 - Lx5 LINE L1 -6147 939 816 4 1216 1839 156 104 26 chr17 82835412 82835795 -12436856 + Lx2 LINE L1 6528 6940 -57 4 1216 249 296 0 0 chr17 82835817 82835871 -12436780 + B3A SINE B2 27 80 -118 4 1216 23 0 0 0 chr17 82836014 82836037 -12436614 + AT_rich Low_complexity Low_complexity 1 23 0 4 1216 775 330 20 44 chr17 82836334 82836629 -12436022 + B4A SINE B4 1 288 -4 4 1216 3568 160 71 23 chr17 82836662 82836868 -12435783 + RLTR17 LTR ERVK 1 205 -487 4 1216 180 0 0 0 chr17 82836868 82836888 -12435763 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 1216 3568 160 71 23 chr17 82836888 82837341 -12435310 + RLTR17 LTR ERVK 206 692 0 4 1217 553 301 0 0 chr17 82838045 82838188 -12434463 + RSINE1 SINE B4 6 148 -17 4 1217 3568 167 5 9 chr17 82838836 82839478 -12433173 + Lx3C LINE L1 6327 6965 -11 4 1217 1824 125 9 59 chr17 82839596 82839935 -12432716 - RLTRETN_Mm LTR ERVK 0 322 1 4 1217 3062 117 30 27 chr17 82839935 82840462 -12432189 - MMETn-int LTR ERVK 0 4844 4316 4 1217 2639 119 0 5 chr17 82840477 82840857 -12431794 - Lx3B LINE L1 -97 6876 6499 4 1217 1126 241 162 21 chr17 82840886 82841225 -12431426 - MTD LTR MaLR 0 419 33 4 1217 1333 271 83 32 chr17 82841233 82841725 -12430926 + Lx8 LINE L1 6873 7389 -84 4 1217 349 98 0 220 chr17 82841938 82841998 -12430653 + B2_Mm1t SINE B2 102 160 -33 4 1217 207 0 0 0 chr17 82841998 82842021 -12430630 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 4 1217 349 98 0 220 chr17 82842021 82842078 -12430573 + B2_Mm1t SINE B2 161 193 0 4 1217 991 163 11 169 chr17 82842088 82842309 -12430342 + Lx9 LINE L1 7333 7512 -132 4 1217 300 53 0 0 chr17 82842309 82842347 -12430304 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1217 991 163 11 169 chr17 82842347 82842487 -12430164 + Lx9 LINE L1 7513 7637 -7 4 1217 516 325 61 17 chr17 82842510 82842804 -12429847 + L1MC4a LINE L1 7348 7654 -228 4 1217 245 51 26 0 chr17 82842809 82842848 -12429803 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 4 1217 25 0 0 0 chr17 82843484 82843509 -12429142 + AT_rich Low_complexity Low_complexity 1 25 0 4 1217 862 147 266 0 chr17 82843705 82843882 -12428769 + URR1B DNA MER1_type 2 225 0 4 1217 22 35 0 0 chr17 82844096 82844125 -12428526 + AT_rich Low_complexity Low_complexity 1 29 0 4 1217 29 84 0 0 chr17 82844413 82844484 -12428167 + AT_rich Low_complexity Low_complexity 1 71 0 4 1217 24 77 0 0 chr17 82844921 82844973 -12427678 + AT_rich Low_complexity Low_complexity 1 52 0 4 1217 225 374 10 0 chr17 82844991 82845090 -12427561 + MER58D DNA MER1_type 285 384 -2 4 1217 465 103 0 0 chr17 82846208 82846276 -12426375 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 4 1217 181 291 18 0 chr17 82846772 82846827 -12425824 - MIRb SINE MIR -148 120 65 4 1217 387 0 0 0 chr17 82847060 82847103 -12425548 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1217 21 0 0 0 chr17 82847471 82847492 -12425159 + AT_rich Low_complexity Low_complexity 1 21 0 4 1217 37 23 0 0 chr17 82847773 82847817 -12424834 + AT_rich Low_complexity Low_complexity 1 44 0 4 1217 1854 167 157 86 chr17 82847855 82848333 -12424318 + RMER20A LTR ERVK 1 512 -4 4 1217 304 302 78 17 chr17 82848400 82848548 -12424103 - B3A SINE B2 0 216 48 4 1217 508 351 116 29 chr17 82848592 82848992 -12423659 - L1M4 LINE L1 -1117 5029 4586 4 1217 4769 131 43 9 chr17 82848992 82849780 -12422871 - Lx2 LINE L1 0 6997 6183 4 1217 508 336 138 60 chr17 82849780 82850101 -12422550 - L1M4 LINE L1 -1561 4585 4251 4 1217 451 287 29 14 chr17 82850305 82850443 -12422208 + B3 SINE B2 1 140 -76 4 1217 780 202 71 38 chr17 82850689 82850738 -12421913 + URR1A DNA MER1_type 9 63 -163 4 1217 1674 21 0 0 chr17 82850738 82850930 -12421721 - B2_Mm1a SINE B2 -1 192 1 4 1217 780 202 71 38 chr17 82850930 82851091 -12421560 + URR1A DNA MER1_type 64 225 -1 4 1217 236 344 88 29 chr17 82851091 82851295 -12421356 + RSINE1 SINE B4 84 274 -18 4 1217 380 20 0 20 chr17 82851313 82851363 -12421288 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 1217 21 36 0 0 chr17 82851584 82851612 -12421039 + AT_rich Low_complexity Low_complexity 1 28 0 4 1217 225 277 0 58 chr17 82853373 82853442 -12419209 - L2a LINE L2 -3 3423 3359 5 1217 23 33 0 0 chr17 82854012 82854042 -12418609 + AT_rich Low_complexity Low_complexity 1 30 0 5 1217 762 287 116 19 chr17 82854173 82854575 -12418076 - RMER15 LTR ERVL 0 575 45 5 1217 27 29 0 0 chr17 82855086 82855120 -12417531 + AT_rich Low_complexity Low_complexity 1 34 0 5 1217 1068 312 52 61 chr17 82855198 82855740 -12416911 - Lx9 LINE L1 -370 7274 6738 5 1217 1148 284 85 22 chr17 82855798 82856298 -12416353 + Lx9 LINE L1 6091 6710 -934 5 1217 386 323 57 22 chr17 82856379 82856607 -12416044 + L1MC3 LINE L1 7324 7559 -226 5 1217 289 172 0 72 chr17 82856697 82856766 -12415885 + MTE2a LTR MaLR 312 375 -4 5 1217 360 0 0 0 chr17 82857972 82858012 -12414639 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 1217 311 246 73 51 chr17 82858066 82858203 -12414448 + Lx9 LINE L1 7501 7640 -4 5 1217 1289 229 16 29 chr17 82860459 82860774 -12411877 + L1VL4 LINE L1 345 655 -5647 5 1217 4307 115 14 23 chr17 82860743 82861436 -12411215 + L1_Mus4 LINE L1 5925 6611 -25 5 1217 3212 104 62 8 chr17 82861404 82861859 -12410792 + Lx3_Mus LINE L1 6409 6871 -138 5 1217 192 40 0 0 chr17 82861859 82861884 -12410767 + (GGGTG)n Simple_repeat Simple_repeat 5 29 0 5 1217 3212 104 62 8 chr17 82861884 82861924 -12410727 + Lx3_Mus LINE L1 6872 6930 -79 5 1217 229 298 49 21 chr17 82863135 82863279 -12409372 + L1MD LINE L1 3531 3678 -2468 5 1217 35355 36 0 0 chr17 82863442 82869094 -12403557 + L1Md_T LINE L1 1 5589 -297 5 1217 8980 5 0 0 chr17 82869094 82870090 -12402561 + L1Md_T LINE L1 5590 6585 0 5 1217 375 23 0 0 chr17 82870097 82870141 -12402510 + (A)n Simple_repeat Simple_repeat 1 44 0 5 1217 22 35 0 0 chr17 82870915 82870944 -12401707 + AT_rich Low_complexity Low_complexity 1 29 0 5 1217 335 301 125 102 chr17 82871147 82871450 -12401201 - MLT1A LTR MaLR -61 313 4 5 1217 306 281 170 35 chr17 82871457 82871686 -12400965 + L1M5 LINE L1 4457 4716 -1430 5 1217 410 212 105 12 chr17 82871786 82871977 -12400674 - Lx9 LINE L1 -220 7424 7140 5 1217 498 275 18 7 chr17 82872009 82872127 -12400524 + B3A SINE B2 2 121 -72 5 1217 335 121 17 0 chr17 82872127 82872185 -12400466 + (TC)n Simple_repeat Simple_repeat 1 59 0 5 1217 506 268 87 0 chr17 82872260 82872387 -12400264 + RMER19B LTR ERVK 1 138 -764 5 1217 432 210 0 0 chr17 82872363 82872444 -12400207 + RMER19B LTR ERVK 55 135 -767 5 1217 249 136 0 0 chr17 82872452 82872496 -12400155 - RMER19B LTR ERVK -12 890 847 5 1217 483 109 120 0 chr17 82872493 82872585 -12400066 - RMER19B LTR ERVK -224 678 576 5 1217 376 337 80 15 chr17 82872591 82872790 -12399861 - Lx7 LINE L1 -440 7256 7045 5 1217 489 232 10 0 chr17 82872819 82872918 -12399733 - ID_B1 SINE B4 -6 218 119 5 1217 907 53 15 8 chr17 82875226 82875360 -12397291 + L1Md_F3 LINE L1 6450 6584 0 5 1217 30 59 0 0 chr17 82875360 82875411 -12397240 + AT_rich Low_complexity Low_complexity 1 51 0 5 1217 218 214 18 18 chr17 82875513 82875570 -12397081 - B4 SINE B4 -234 58 2 5 1217 209 187 13 0 chr17 82875739 82875814 -12396837 + (TCCA)n Simple_repeat Simple_repeat 1 76 0 5 1217 306 0 0 0 chr17 82877753 82877787 -12394864 + (GGAA)n Simple_repeat Simple_repeat 3 36 0 5 1217 320 173 33 73 chr17 82877789 82877939 -12394712 + GA-rich Low_complexity Low_complexity 4 147 0 5 1217 695 178 0 39 chr17 82877909 82878275 -12394376 + G-rich Low_complexity Low_complexity 1 351 0 5 1217 315 358 40 93 chr17 82879613 82879764 -12392887 + B1F SINE Alu 2 144 -5 5 1217 261 326 0 10 chr17 82880706 82880805 -12391846 - L1MB7 LINE L1 -55 6129 6032 5 1217 11476 23 0 0 chr17 82880990 82882331 -12390320 + L1Md_T LINE L1 4246 5586 -297 5 1217 8948 7 0 0 chr17 82882331 82883327 -12389324 + L1Md_T LINE L1 5587 6582 0 5 1217 315 370 115 11 chr17 82884068 82884251 -12388400 - MamSINE1 SINE tRNA -88 202 1 5 1217 452 362 109 80 chr17 82884598 82884787 -12387864 - MLT2F LTR ERVL -19 644 433 5 1217 621 76 0 0 chr17 82884787 82884879 -12387772 + (CA)n Simple_repeat Simple_repeat 2 93 0 5 1217 452 362 109 80 chr17 82884879 82885214 -12387437 - MLT2F LTR ERVL -231 432 105 5 1217 294 279 149 27 chr17 82885220 82885408 -12387243 + Lx8 LINE L1 7263 7473 0 5 1217 21 36 0 0 chr17 82885408 82885436 -12387215 + AT_rich Low_complexity Low_complexity 1 28 0 5 1217 7165 195 34 12 chr17 82886085 82887712 -12384939 - L1_Mur1 LINE L1 -2715 3171 1509 5 1217 298 396 55 7 chr17 82887733 82888008 -12384643 + Lx8 LINE L1 6969 7256 -217 5 1217 345 378 36 51 chr17 82888329 82888661 -12383990 + Lx8 LINE L1 7146 7472 -1 5 1217 2242 187 32 34 chr17 82888718 82889189 -12383462 - Lx3C LINE L1 -2 6974 6505 5 1217 1978 146 3 46 chr17 82889193 82889544 -12383107 - L1_Mur1 LINE L1 -12 5874 5539 5 1217 231 173 39 0 chr17 82889528 82889580 -12383071 - L1M5 LINE L1 -654 5790 5737 5 1217 243 262 0 73 chr17 82889564 82889662 -12382989 + L1MA5 LINE L1 5828 5925 -375 5 1217 494 315 52 52 chr17 82889783 82890051 -12382600 + MTD LTR MaLR 1 268 -151 5 1217 2280 229 9 98 chr17 82890180 82890850 -12381801 - RMER19C LTR ERVK 0 611 2 5 1217 978 331 89 35 chr17 82891073 82891533 -12381118 + MLT1D LTR MaLR 21 505 0 5 1217 439 259 11 0 chr17 82892497 82892600 -12380051 + B1F2 SINE Alu 17 120 -29 5 1217 274 359 8 25 chr17 82892498 82892610 -12380041 + ID_B1 SINE B4 99 209 -15 5 1217 266 0 29 0 chr17 82892610 82892644 -12380007 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 5 1217 230 302 0 0 chr17 82893378 82893431 -12379220 - MER47A DNA MER2_type -270 96 44 5 1217 1826 141 57 89 chr17 82893739 82894145 -12378506 - RLTR9C LTR ERVK 0 393 1 5 1217 1285 342 93 20 chr17 82894340 82895501 -12377150 - Lx7 LINE L1 -122 7351 6076 5 1217 378 0 0 0 chr17 82896462 82896504 -12376147 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1217 626 226 29 157 chr17 82897505 82897745 -12374906 - ORR1C2 LTR MaLR 0 394 186 5 1217 2284 227 68 63 chr17 82897745 82898336 -12374315 + RMER19C LTR ERVK 1 594 -17 5 1217 755 251 17 0 chr17 82898360 82898535 -12374116 - ORR1C2 LTR MaLR -206 178 1 5 1217 28 61 0 0 chr17 82898917 82898966 -12373685 + AT_rich Low_complexity Low_complexity 1 49 0 5 1217 25 0 0 0 chr17 82899402 82899427 -12373224 + AT_rich Low_complexity Low_complexity 1 25 0 5 1217 466 269 26 40 chr17 82900030 82900181 -12372470 - B1F1 SINE Alu 0 149 1 5 1217 699 279 25 5 chr17 82900181 82900257 -12372394 - ID SINE ID -142 82 3 5 1217 3541 116 8 2 chr17 82901439 82901965 -12370686 - Lx2 LINE L1 -830 6167 5639 5 1217 283 311 105 19 chr17 82902493 82902598 -12370053 - B1F SINE Alu -10 139 26 5 1217 277 291 0 0 chr17 82902606 82902682 -12369969 - Lx8 LINE L1 -953 6520 6458 5 1217 534 309 21 5 chr17 82902710 82902902 -12369749 + Lx9 LINE L1 7227 7421 -223 5 1217 356 170 26 86 chr17 82902903 82903019 -12369632 - RLTR21 LTR ERVK -293 1279 1171 5 1217 468 311 101 7 chr17 82903917 82904066 -12368585 + RSINE1 SINE B4 3 165 0 5 1217 286 23 47 0 chr17 82904422 82904465 -12368186 + (TA)n Simple_repeat Simple_repeat 1 45 0 5 1217 375 330 149 86 chr17 82905626 82906101 -12366550 + MLT2B2 LTR ERVL 1 505 -10 5 1217 181 163 20 20 chr17 82907590 82907640 -12365011 + (TTA)n Simple_repeat Simple_repeat 3 52 0 5 1217 2602 305 61 48 chr17 82907705 82908716 -12363935 + Lx8 LINE L1 6211 7235 -238 5 1217 346 301 0 0 chr17 82908892 82908965 -12363686 + B3A SINE B2 7 79 -119 5 1217 206 195 0 0 chr17 82909033 82909059 -12363592 + polypurine Low_complexity Low_complexity 2 27 0 5 1217 246 32 0 0 chr17 82909059 82909090 -12363561 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1217 206 195 0 0 chr17 82909090 82909104 -12363547 + polypurine Low_complexity Low_complexity 28 41 0 5 1217 200 208 0 40 chr17 82909114 82909164 -12363487 + (CATATA)n Simple_repeat Simple_repeat 1 48 0 5 1217 1398 274 76 26 chr17 82909279 82909849 -12362802 - Lx9 LINE L1 -1594 6050 5421 5 1217 738 332 78 6 chr17 82909968 82910316 -12362335 + Lx9 LINE L1 6358 6730 -914 5 1217 1012 318 83 52 chr17 82910325 82910601 -12362050 + Lx9 LINE L1 6836 7091 -553 5 1217 576 53 0 0 chr17 82910601 82910677 -12361974 + (CA)n Simple_repeat Simple_repeat 1 76 0 5 1217 1012 318 83 52 chr17 82910677 82910944 -12361707 + Lx9 LINE L1 7092 7396 -248 5 1217 322 221 0 38 chr17 82911006 82911041 -12361610 + HAL1-3A_ME LINE L1 1979 2013 -845 5 1217 459 0 0 0 chr17 82911041 82911092 -12361559 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 1217 322 221 0 38 chr17 82911092 82911136 -12361515 + HAL1-3A_ME LINE L1 2014 2054 -804 5 1217 335 306 24 16 chr17 82911709 82911832 -12360819 + ID_B1 SINE B4 97 220 -4 5 1217 491 355 85 29 chr17 82912032 82912610 -12360041 + Charlie7 DNA MER1_type 991 1600 -1012 5 1217 212 0 36 0 chr17 82913720 82913748 -12358903 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1217 347 286 72 52 chr17 82913775 82914140 -12358511 + MTEa LTR MaLR 12 414 -5 5 1217 332 192 41 16 chr17 82914558 82914680 -12357971 + (TA)n Simple_repeat Simple_repeat 1 125 0 5 1217 1999 230 22 65 chr17 82915215 82915754 -12356897 - RMER19C LTR ERVK 0 611 96 5 1217 268 340 68 56 chr17 82915790 82916054 -12356597 + MLT1E2 LTR MaLR 12 286 -219 5 1217 1563 47 0 0 chr17 82916137 82916329 -12356322 - B2_Mm1t SINE B2 0 193 2 5 1217 191 182 44 22 chr17 82916394 82916439 -12356212 + L3 LINE CR1 776 821 -3668 5 1217 880 328 49 60 chr17 82918249 82918885 -12353766 + Lx8 LINE L1 6812 7440 -33 5 1217 5430 110 22 10 chr17 82918879 82919971 -12352680 - Lx3C LINE L1 -826 6150 5054 5 1217 5135 124 20 8 chr17 82919996 82920798 -12351853 + Lx3C LINE L1 6158 6969 -7 5 1217 375 222 28 0 chr17 82920910 82921018 -12351633 - Lx9 LINE L1 -9 7635 7525 5 1217 211 224 17 0 chr17 82922549 82922607 -12350044 + A-rich Low_complexity Low_complexity 2 60 0 5 1217 700 326 8 43 chr17 82922632 82922956 -12349695 + Lx7 LINE L1 6450 6765 -708 5 1217 254 336 15 7 chr17 82923116 82923251 -12349400 - L1M3 LINE L1 -485 5686 5551 5 1217 38476 22 11 17 chr17 82923291 82924939 -12347712 - L1Md_T LINE L1 0 6582 4929 6 1217 225 183 46 77 chr17 82924939 82925004 -12347647 + RMER20A LTR ERVK 186 248 -268 6 1217 38476 22 11 17 chr17 82925004 82929474 -12343177 - L1Md_T LINE L1 0 4928 440 6 1217 390 279 119 18 chr17 82929741 82929960 -12342691 - L1M3 LINE L1 -873 5267 5027 6 1217 300 239 22 11 chr17 82930064 82930153 -12342498 - L1M3 LINE L1 -1312 4831 4742 6 1217 287 288 78 44 chr17 82930254 82930408 -12342243 - Lx9 LINE L1 -405 7239 6949 6 1217 21 36 0 0 chr17 82930429 82930457 -12342194 + AT_rich Low_complexity Low_complexity 1 28 0 6 1217 373 352 100 100 chr17 82930466 82930756 -12341895 + B4 SINE B4 3 292 0 6 1217 188 103 0 49 chr17 82930774 82930815 -12341836 + (CAGAGA)n Simple_repeat Simple_repeat 4 42 0 6 1217 1134 56 0 0 chr17 82931312 82931455 -12341196 + B1_Mus2 SINE Alu 5 147 0 6 1217 543 246 18 0 chr17 82931496 82931610 -12341041 + ID_B1 SINE B4 103 218 -6 6 1217 367 264 286 65 chr17 82931673 82931858 -12340793 + B4A SINE B4 6 231 -61 6 1217 433 104 0 25 chr17 82931917 82931996 -12340655 + (CA)n Simple_repeat Simple_repeat 2 78 0 6 1217 185 160 0 74 chr17 82932632 82932686 -12339965 + GA-rich Low_complexity Low_complexity 5 54 0 6 1217 625 128 0 0 chr17 82933384 82933493 -12339158 - Lx2A1 LINE L1 -8 7000 6892 6 1217 1611 42 0 0 chr17 82935167 82935360 -12337291 - B2_Mm1t SINE B2 0 193 1 6 1217 1011 134 0 0 chr17 82936523 82936702 -12335949 + (CA)n Simple_repeat Simple_repeat 1 179 0 6 1217 250 288 0 0 chr17 82937416 82937482 -12335169 - L1M4 LINE L1 -621 5553 5488 6 1217 355 335 120 14 chr17 82937492 82937783 -12334868 - L1MD LINE L1 -845 5301 4980 6 1217 578 266 53 29 chr17 82939766 82939975 -12332676 - ERVL-int LTR ERVL -313 5444 5231 6 1217 1838 300 88 34 chr17 82940304 82941260 -12331391 - Lx8 LINE L1 -12 7461 6455 6 1217 360 0 0 0 chr17 82941397 82941437 -12331214 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1217 35 54 0 0 chr17 82941686 82941742 -12330909 + AT_rich Low_complexity Low_complexity 1 56 0 6 1217 502 303 73 33 chr17 82942258 82942558 -12330093 + L1MD3 LINE L1 7508 7819 -176 6 1217 314 281 29 15 chr17 82942552 82942689 -12329962 - L1_Mur3 LINE L1 -3357 2523 2385 6 1217 679 284 35 4 chr17 82942684 82942910 -12329741 - Lx9 LINE L1 -165 7479 7247 6 1217 681 264 119 93 chr17 82944327 82944833 -12327818 - L1MA9 LINE L1 -160 6152 5634 6 1217 563 325 28 52 chr17 82944881 82945244 -12327407 + Lx8 LINE L1 6592 6945 -528 6 1217 644 110 10 0 chr17 82945240 82945340 -12327311 - Lx2B LINE L1 -633 6367 6267 6 1217 207 0 0 0 chr17 82945667 82945690 -12326961 + (A)n Simple_repeat Simple_repeat 1 23 0 6 1217 375 290 58 0 chr17 82946062 82946217 -12326434 - L1M4 LINE L1 -1095 5051 4888 6 1217 245 100 0 20 chr17 82946250 82946294 -12326357 + (TTGG)n Simple_repeat Simple_repeat 4 47 0 6 1217 388 0 0 37 chr17 82946294 82946348 -12326303 + (GTTTG)n Simple_repeat Simple_repeat 2 53 0 6 1217 245 100 0 20 chr17 82946348 82946354 -12326297 + (TTGG)n Simple_repeat Simple_repeat 2 7 0 6 1217 856 85 138 0 chr17 82946361 82946491 -12326160 - B1_Mus1 SINE Alu 0 148 1 6 1217 273 308 86 26 chr17 82946491 82946724 -12325927 - L1M4 LINE L1 -1260 4886 4640 6 1217 378 0 0 0 chr17 82947345 82947387 -12325264 + (TTG)n Simple_repeat Simple_repeat 2 43 0 6 1217 21 0 0 0 chr17 82947483 82947504 -12325147 + AT_rich Low_complexity Low_complexity 1 21 0 6 1217 498 299 55 51 chr17 82950868 82951104 -12321547 - ORR1E LTR MaLR -120 239 3 6 1217 186 143 0 0 chr17 82951235 82951270 -12321381 + (GAA)n Simple_repeat Simple_repeat 2 36 0 6 1217 673 265 59 17 chr17 82951517 82951755 -12320896 - Lx7 LINE L1 0 7696 7449 6 1217 1172 94 0 13 chr17 82951761 82952001 -12320650 + (CA)n Simple_repeat Simple_repeat 1 236 0 6 1217 3670 242 13 6 chr17 82952020 82952838 -12319813 - Lx7 LINE L1 -331 7365 6542 6 1217 270 0 0 0 chr17 82952994 82953024 -12319627 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 1217 1245 96 0 0 chr17 82953036 82953214 -12319437 + (GGGAGA)n Simple_repeat Simple_repeat 3 180 0 6 1217 24 0 0 0 chr17 82954389 82954413 -12318238 + AT_rich Low_complexity Low_complexity 1 24 0 6 1217 624 298 82 41 chr17 82954473 82954788 -12317863 - RLTR15 LTR ERVK -31 328 1 6 1217 463 209 78 9 chr17 82954892 82955008 -12317643 + MTD LTR MaLR 293 416 -3 6 1217 225 0 0 0 chr17 82955266 82955291 -12317360 + (TA)n Simple_repeat Simple_repeat 1 25 0 6 1217 970 324 72 25 chr17 82955512 82955873 -12316778 + MTE2b LTR MaLR 1 378 -1 6 1217 186 171 0 0 chr17 82957649 82957690 -12314961 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 1217 396 260 166 14 chr17 82957912 82958123 -12314528 + L1MB3 LINE L1 5799 6041 -142 6 1217 468 0 0 0 chr17 82958679 82958731 -12313920 + (TC)n Simple_repeat Simple_repeat 1 52 0 6 1217 198 0 0 0 chr17 82958731 82958752 -12313899 + (CA)n Simple_repeat Simple_repeat 1 22 0 6 1217 25 31 0 0 chr17 82959246 82959278 -12313373 + AT_rich Low_complexity Low_complexity 1 32 0 6 1217 1211 223 34 48 chr17 82960452 82960810 -12311841 + Lx9 LINE L1 4810 5162 -685 6 1217 1369 244 91 31 chr17 82960810 82961292 -12311359 + Lx9 LINE L1 5590 6100 -1544 6 1217 1827 259 27 31 chr17 82961375 82961861 -12310790 + Lx9 LINE L1 6318 6801 -843 6 1217 2024 228 130 5 chr17 82961857 82962300 -12310351 + Lx9 LINE L1 7006 7515 -129 6 1217 528 68 0 0 chr17 82962300 82962373 -12310278 + (TG)n Simple_repeat Simple_repeat 1 73 0 6 1217 2024 228 130 5 chr17 82962373 82962497 -12310154 + Lx9 LINE L1 7516 7644 0 6 1217 439 173 158 0 chr17 82962528 82962661 -12309990 + Lx9 LINE L1 7489 7642 -2 6 1217 210 330 52 52 chr17 82962745 82962860 -12309791 + B4A SINE B4 13 127 -165 6 1217 260 261 118 47 chr17 82963410 82963579 -12309072 + L1M2 LINE L1 5098 5278 -865 6 1217 905 199 76 68 chr17 82965003 82965240 -12307411 - RMER19B LTR ERVK -149 753 515 6 1217 4778 168 143 7 chr17 82965240 82966315 -12306336 + L1_Mur2 LINE L1 3177 4397 -1480 6 1217 27 0 0 0 chr17 82966319 82966346 -12306305 + AT_rich Low_complexity Low_complexity 1 27 0 6 1217 2762 87 0 0 chr17 82966354 82966721 -12305930 - L1_Mus1 LINE L1 -219 5664 5298 6 1217 7172 68 2 1 chr17 82966719 82967635 -12305016 + L1_Mus1 LINE L1 5651 6567 0 6 152 5846 152 29 14 chr17 82967639 82968677 -12303974 + L1_Mur2 LINE L1 4714 5767 -110 6 1218 361 135 14 24 chr17 82968709 82968787 -12303864 - ORR1A4 LTR MaLR -304 90 1 6 1218 3549 212 44 20 chr17 82968790 82969555 -12303096 + Lx5 LINE L1 6267 7050 0 6 1218 194 116 23 0 chr17 82970586 82970629 -12302022 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 6 1218 246 62 0 0 chr17 82971237 82971269 -12301382 + (TGG)n Simple_repeat Simple_repeat 1 32 0 6 1218 849 246 5 27 chr17 82971306 82971494 -12301157 + MTD LTR MaLR 18 201 -218 6 1218 645 14 0 0 chr17 82971499 82971573 -12301078 + (GA)n Simple_repeat Simple_repeat 2 75 0 6 1218 3167 213 47 5 chr17 82971575 82972231 -12300420 + Lx5 LINE L1 6364 7047 -3 6 1218 750 245 106 19 chr17 82972237 82972445 -12300206 + MTD LTR MaLR 196 421 0 6 1218 746 124 25 8 chr17 82972448 82972570 -12300081 - ORR1A4 LTR MaLR -2 327 204 6 1218 2561 61 0 3 chr17 82973422 82973751 -12298900 - L1_Mus1 LINE L1 -1 6566 6239 6 1218 21 0 0 0 chr17 82974494 82974515 -12298136 + AT_rich Low_complexity Low_complexity 1 21 0 6 1218 35953 32 1 14 chr17 82975365 82980478 -12292173 + L1Md_T LINE L1 543 5586 -297 6 1218 8335 37 1 0 chr17 82980478 82981473 -12291178 + L1Md_T LINE L1 5587 6582 0 6 1218 28 0 0 0 chr17 82981876 82981904 -12290747 + AT_rich Low_complexity Low_complexity 1 28 0 6 1218 4097 98 21 19 chr17 82982171 82982795 -12289856 + L1_Mus4 LINE L1 6009 6633 -3 6 1218 681 92 0 0 chr17 82983389 82983487 -12289164 + (CAGG)n Simple_repeat Simple_repeat 2 99 0 6 1218 213 121 0 0 chr17 82984458 82984491 -12288160 + (TTG)n Simple_repeat Simple_repeat 1 33 0 6 1218 474 210 81 0 chr17 82984491 82984615 -12288036 - Lx7 LINE L1 -2 7694 7561 6 1218 237 353 50 0 chr17 82984789 82984908 -12287743 + MER20 DNA MER1_type 94 218 -1 6 1218 324 319 82 6 chr17 82985528 82985698 -12286953 - MER112 DNA MER1_type -2 259 77 6 1218 198 0 0 0 chr17 82985832 82985854 -12286797 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 6 1218 4276 58 9 9 chr17 82985891 82986452 -12286199 - L1Md_F2 LINE L1 -12 6570 6010 6 1218 268 305 62 21 chr17 82986653 82986797 -12285854 - MIR SINE MIR -16 246 97 6 1218 561 333 103 50 chr17 82986798 82987117 -12285534 - MLT1A0 LTR MaLR -10 355 20 6 1218 259 231 19 0 chr17 82987820 82987928 -12284723 + GA-rich Low_complexity Low_complexity 4 113 0 6 1218 768 50 0 0 chr17 82987929 82988030 -12284621 + (GA)n Simple_repeat Simple_repeat 2 102 0 6 1218 450 0 0 0 chr17 82988929 82988979 -12283672 + (TTTTA)n Simple_repeat Simple_repeat 2 51 0 6 1218 500 309 65 7 chr17 82988999 82989152 -12283499 - B3A SINE B2 -33 165 4 6 1218 321 26 0 0 chr17 82989250 82989288 -12283363 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1218 243 242 0 31 chr17 82989562 82989626 -12283025 - L1MC LINE L1 -2017 5865 5804 6 1218 416 86 14 0 chr17 82990888 82990958 -12281693 + (TTG)n Simple_repeat Simple_repeat 1 71 0 6 1218 21 0 0 0 chr17 82991808 82991829 -12280822 + AT_rich Low_complexity Low_complexity 1 21 0 6 1218 945 239 24 16 chr17 82991944 82992191 -12280460 + L1VL4 LINE L1 194 442 -5860 6 1218 582 148 269 11 chr17 82992658 82992833 -12279818 - MTD LTR MaLR -2 419 200 6 1218 648 0 0 0 chr17 82992834 82992906 -12279745 + (TTTC)n Simple_repeat Simple_repeat 2 73 0 6 1218 874 57 0 8 chr17 82992928 82993051 -12279600 - L1_Mus2 LINE L1 0 6566 6445 6 1218 265 336 104 13 chr17 82993059 82993213 -12279438 + Lx8 LINE L1 6372 6501 -972 6 1218 264 167 0 69 chr17 82993213 82993271 -12279380 + MTC LTR MaLR 1 54 -367 6 1218 275 238 0 0 chr17 82993274 82993337 -12279314 - L1M2 LINE L1 -593 5719 5657 6 1218 585 264 121 10 chr17 82993338 82993545 -12279106 - Lx8 LINE L1 -271 7202 6973 6 1218 202 151 18 36 chr17 82993962 82994017 -12278634 + (TATG)n Simple_repeat Simple_repeat 2 55 0 6 1218 6376 124 44 6 chr17 82994421 82995512 -12277139 + L1_Mus3 LINE L1 2819 3951 -1932 6 1218 7449 114 8 1 chr17 82995511 82997367 -12275284 + L1_Mus3 LINE L1 4766 6634 -4 6 1218 1103 122 0 11 chr17 82997508 82997690 -12274961 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 1218 332 330 165 29 chr17 82997866 82998206 -12274445 - L1ME3A LINE L1 -57 6116 5731 7 1218 446 346 98 44 chr17 82998908 82999225 -12273426 - ORR1E LTR MaLR 0 359 26 7 1218 330 326 69 42 chr17 82999313 82999510 -12273141 + MLT1A0 LTR MaLR 168 365 -9 7 1218 1022 117 7 0 chr17 82999672 82999817 -12272834 - L1_Mus3 LINE L1 -273 6365 6220 7 1218 1222 100 69 48 chr17 82999811 83000000 -12272651 + L1_Mus3 LINE L1 6332 6524 -114 7 1218 285 108 179 12 chr17 83000000 83000084 -12272567 + L1_Mus3 LINE L1 6525 6622 -16 1 1218 495 0 0 0 chr17 83000084 83000139 -12272512 + (TA)n Simple_repeat Simple_repeat 1 55 0 2 1218 664 69 19 10 chr17 83003712 83003815 -12268836 + (TAGA)n Simple_repeat Simple_repeat 1 104 0 3 1218 186 167 0 0 chr17 83004136 83004172 -12268479 + (CATG)n Simple_repeat Simple_repeat 3 38 0 4 1218 315 0 0 0 chr17 83004198 83004233 -12268418 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1218 25 0 0 0 chr17 83004711 83004736 -12267915 + AT_rich Low_complexity Low_complexity 1 25 0 6 1218 396 0 0 0 chr17 83004865 83004909 -12267742 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 1218 324 155 0 0 chr17 83005386 83005457 -12267194 + GA-rich Low_complexity Low_complexity 1 71 0 8 1218 22 35 0 0 chr17 83006631 83006660 -12265991 + AT_rich Low_complexity Low_complexity 1 29 0 9 1218 630 100 0 0 chr17 83007656 83007756 -12264895 + (TG)n Simple_repeat Simple_repeat 1 100 0 1 1218 439 311 236 4 chr17 83008720 83008962 -12263689 - MLT1F2 LTR MaLR -37 523 226 1 1218 33226 72 19 5 chr17 83009216 83015343 -12257308 - L1Md_F3 LINE L1 0 6584 422 1 1218 28 29 0 0 chr17 83015471 83015506 -12257145 + AT_rich Low_complexity Low_complexity 1 35 0 1 1218 357 96 0 0 chr17 83016041 83016093 -12256558 - HAL1-3A_ME LINE L1 -831 2027 1976 1 1218 689 304 31 120 chr17 83016157 83016449 -12256202 - B4 SINE B4 0 292 27 1 1218 3792 81 13 8 chr17 83017511 83018034 -12254617 + L1_Mus4 LINE L1 6094 6619 -17 1 1218 495 0 0 0 chr17 83018034 83018089 -12254562 + (TAA)n Simple_repeat Simple_repeat 3 57 0 1 1218 270 0 0 0 chr17 83018417 83018447 -12254204 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 1 1218 469 294 63 48 chr17 83018571 83019291 -12253360 - L1_Mur3 LINE L1 -4118 1762 1021 1 1218 1935 227 42 105 chr17 83019595 83019926 -12252725 - Lx6 LINE L1 -8 7452 7125 2 1218 1199 56 0 0 chr17 83019926 83020069 -12252582 + B1_Mus1 SINE Alu 1 143 -5 2 1218 1935 227 42 105 chr17 83020069 83020479 -12252172 - Lx6 LINE L1 -336 7124 6758 2 1218 356 330 75 54 chr17 83020799 83021039 -12251612 + MIR SINE MIR 5 249 -13 2 1218 405 185 8 0 chr17 83021467 83021564 -12251087 - L1_Mur2 LINE L1 -3683 2197 2097 2 1218 759 222 62 11 chr17 83021602 83021780 -12250871 + RMER19B LTR ERVK 357 543 -359 2 1218 363 207 0 47 chr17 83021799 83021885 -12250766 + RMER19B LTR ERVK 821 902 0 2 1218 1252 158 25 42 chr17 83021885 83021933 -12250718 - L1_Mur2 LINE L1 -3768 2109 2062 2 1218 239 0 32 0 chr17 83021933 83021964 -12250687 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1218 1252 158 25 42 chr17 83021964 83022200 -12250451 - L1_Mur2 LINE L1 -3816 2061 1831 2 1218 1154 70 0 0 chr17 83022774 83022916 -12249735 + B1_Mus1 SINE Alu 1 142 -6 2 1218 1071 64 0 0 chr17 83022918 83023058 -12249593 + (GA)n Simple_repeat Simple_repeat 2 141 0 2 1218 1160 56 6 0 chr17 83023752 83023913 -12248738 + (GA)n Simple_repeat Simple_repeat 1 162 0 2 1218 3825 194 35 167 chr17 83024251 83025470 -12247181 - RMER1B Other Other -4 1062 5 2 1218 2050 198 43 85 chr17 83026193 83026722 -12245929 - RLTR11A LTR ERVK -3 525 19 3 1218 403 181 43 0 chr17 83026803 83026897 -12245754 + Lx9 LINE L1 7395 7492 -152 3 1218 570 265 56 42 chr17 83027226 83027264 -12245387 - B3 SINE B2 0 216 180 3 1218 510 96 0 0 chr17 83027264 83027337 -12245314 + (TG)n Simple_repeat Simple_repeat 2 74 0 3 1218 570 265 56 42 chr17 83027337 83027511 -12245140 - B3 SINE B2 -37 179 1 3 1218 252 0 0 0 chr17 83028062 83028090 -12244561 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 1218 556 297 10 62 chr17 83029025 83029219 -12243432 - MLT1B LTR MaLR -8 382 199 3 1218 229 299 0 13 chr17 83029221 83029299 -12243352 + GA-rich Low_complexity Low_complexity 1 77 0 3 1218 290 324 90 14 chr17 83029299 83029443 -12243208 - MLT1B LTR MaLR -213 177 23 3 1218 304 250 135 82 chr17 83029428 83029598 -12243053 + MLT1C LTR MaLR 288 466 -1 3 1218 350 376 22 45 chr17 83029625 83029803 -12242848 + MLT1C-int LTR MaLR 866 1039 -450 3 1218 652 297 29 73 chr17 83029825 83029941 -12242710 + RLTR12B LTR ERVK 11 118 -450 3 1218 4050 184 29 23 chr17 83029941 83030733 -12241918 - Lx3C LINE L1 -2 6974 6178 4 1218 652 297 32 76 chr17 83030733 83030944 -12241707 + RLTR12B LTR ERVK 116 324 -244 3 1218 422 248 104 115 chr17 83031172 83031382 -12241269 + MLT1C LTR MaLR 181 464 -3 3 1218 618 109 0 0 chr17 83031931 83032023 -12240628 + (TC)n Simple_repeat Simple_repeat 1 92 0 4 1218 896 255 42 12 chr17 83032294 83032631 -12240020 + L1_Mur3 LINE L1 2613 2959 -2921 4 1218 1385 179 53 76 chr17 83032946 83032987 -12239664 - MT2B LTR ERVL 0 601 561 4 1218 468 0 0 0 chr17 83032987 83033039 -12239612 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 1218 1385 179 53 76 chr17 83033039 83033198 -12239453 - MT2B LTR ERVL -41 560 403 4 1218 3000 33 3 64 chr17 83033198 83033587 -12239064 - RLTR10B2 LTR ERVK 0 365 1 4 1218 1385 209 112 96 chr17 83033587 83033889 -12238762 - MT2B LTR ERVL -199 402 3 4 1218 879 279 32 99 chr17 83034454 83034859 -12237792 - MTE2b LTR MaLR -1 378 1 4 1218 3688 60 8 0 chr17 83036929 83037484 -12235167 - L1_Mus3 LINE L1 -560 6078 5520 4 1218 3456 108 27 27 chr17 83037487 83037773 -12234878 + L1_Mus3 LINE L1 6083 6365 -273 4 1218 351 0 0 0 chr17 83037773 83037812 -12234839 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1218 3456 108 27 27 chr17 83037812 83038078 -12234573 + L1_Mus3 LINE L1 6366 6635 -3 4 1218 1417 251 60 16 chr17 83038692 83039086 -12233565 + MTD LTR MaLR 7 405 -14 4 1218 961 278 77 29 chr17 83040477 83040788 -12231863 + MTE2a LTR MaLR 2 327 -52 5 1218 1693 278 28 13 chr17 83040908 83041367 -12231284 - Lx5 LINE L1 -10 7040 6575 5 1218 3345 175 19 7 chr17 83041363 83042191 -12230460 + Lx5 LINE L1 5207 6048 -1002 5 1218 1934 256 15 51 chr17 83042197 83042725 -12229926 + RMER19C LTR ERVK 103 611 0 5 1218 2033 235 55 4 chr17 83042730 83043222 -12229429 + Lx5 LINE L1 6058 6574 -476 5 1218 21 36 0 0 chr17 83043594 83043622 -12229029 + AT_rich Low_complexity Low_complexity 1 28 0 5 1218 25 0 0 0 chr17 83044106 83044131 -12228520 + AT_rich Low_complexity Low_complexity 1 25 0 5 1218 183 244 22 0 chr17 83044337 83044382 -12228269 + L2a LINE L2 3381 3426 0 5 1218 460 316 15 15 chr17 83045312 83045447 -12227204 + MTEb LTR MaLR 3 137 -242 5 1218 276 331 92 46 chr17 83045447 83045508 -12227143 + MT2A LTR ERVL 3 207 -326 5 1218 261 0 0 0 chr17 83046368 83046397 -12226254 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1218 479 176 8 0 chr17 83046638 83046763 -12225888 + (CA)n Simple_repeat Simple_repeat 1 126 0 6 1218 313 284 22 11 chr17 83046765 83046854 -12225797 + HAL1-3A_ME LINE L1 1975 2064 -794 6 1218 435 38 0 0 chr17 83047137 83047190 -12225461 + (TC)n Simple_repeat Simple_repeat 2 54 0 6 1218 453 282 56 139 chr17 83047218 83047454 -12225197 - Lx8 LINE L1 -208 7436 7072 6 1218 519 31 0 0 chr17 83047454 83047519 -12225132 + (CA)n Simple_repeat Simple_repeat 1 65 0 6 1218 453 282 56 139 chr17 83047519 83047743 -12224908 - Lx8 LINE L1 -450 7194 6876 6 1218 4688 89 21 0 chr17 83047823 83048474 -12224177 - Lx3_Mus LINE L1 0 7009 6345 6 1218 3172 104 93 45 chr17 83048475 83048651 -12224000 + Lx3A LINE L1 5711 5918 -1063 6 1218 1077 57 0 0 chr17 83048651 83048792 -12223859 + (GAAAA)n Simple_repeat Simple_repeat 2 142 0 6 1218 3172 104 93 45 chr17 83048792 83049219 -12223432 + Lx3A LINE L1 5919 6342 -639 6 1218 422 88 15 0 chr17 83049411 83049479 -12223172 + (TA)n Simple_repeat Simple_repeat 1 69 0 6 1218 540 70 12 0 chr17 83049550 83049636 -12223015 - Lx LINE L1 -2 6652 6566 6 1218 860 284 79 8 chr17 83049638 83050022 -12222629 + Lx5 LINE L1 6506 6886 -574 7 1218 327 338 48 48 chr17 83050040 83050208 -12222443 + ORR1E LTR MaLR 22 189 -170 7 1218 593 27 13 0 chr17 83050738 83050813 -12221838 + (TC)n Simple_repeat Simple_repeat 1 76 0 7 1218 196 185 18 18 chr17 83050813 83050868 -12221783 + CT-rich Low_complexity Low_complexity 3 57 0 7 1218 563 211 7 99 chr17 83053046 83053188 -12219463 - ORR1B1 LTR MaLR -265 129 1 7 1218 522 0 0 0 chr17 83053642 83053700 -12218951 + (TC)n Simple_repeat Simple_repeat 1 58 0 7 1218 1482 284 53 87 chr17 83054365 83055081 -12217570 + RMER19C LTR ERVK 1 735 -2 7 1218 279 0 0 0 chr17 83056720 83056751 -12215900 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 1218 330 220 0 0 chr17 83057814 83057914 -12214737 + (TG)n Simple_repeat Simple_repeat 1 100 0 7 1218 497 244 6 0 chr17 83057942 83058118 -12214533 + (TG)n Simple_repeat Simple_repeat 2 178 0 7 1218 209 214 0 0 chr17 83058119 83058161 -12214490 + (TATATG)n Simple_repeat Simple_repeat 1 42 0 7 1218 199 304 0 0 chr17 83058181 83058227 -12214424 + L2c LINE L2 3337 3382 -5 8 1218 568 353 72 3 chr17 83058626 83058916 -12213735 - L3 LINE CR1 -555 3934 3625 8 1218 183 80 0 0 chr17 83059027 83059052 -12213599 + (TG)n Simple_repeat Simple_repeat 2 26 0 8 1218 621 330 70 13 chr17 83059084 83059311 -12213340 - B4 SINE B4 -50 242 3 8 1218 341 316 51 33 chr17 83060349 83060624 -12212027 + Lx9 LINE L1 7321 7600 -44 8 1218 410 204 10 0 chr17 83061003 83061106 -12211545 + (TG)n Simple_repeat Simple_repeat 1 104 0 8 1218 368 245 300 67 chr17 83062483 83062750 -12209901 + RLTR15 LTR ERVK 1 329 -30 8 1218 195 69 0 0 chr17 83062834 83062863 -12209788 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 8 1218 406 279 18 0 chr17 83063084 83063195 -12209456 - PB1D7 SINE Alu -7 113 1 8 1218 1746 297 134 21 chr17 83064591 83065731 -12206920 + L1MCa LINE L1 2 1270 -5238 8 1218 4737 108 54 10 chr17 83065858 83066579 -12206072 + Lx LINE L1 5894 6646 -8 9 1218 1820 155 0 99 chr17 83066742 83067107 -12205544 + ORR1A4 LTR MaLR 1 329 0 9 1218 6298 182 103 135 chr17 83067107 83067444 -12205207 + ORR1A4-int LTR MaLR 1 345 -1618 9 1218 540 0 0 0 chr17 83067444 83067504 -12205147 + (TAGA)n Simple_repeat Simple_repeat 4 63 0 9 1218 6298 182 103 135 chr17 83067504 83067626 -12205025 + ORR1A4-int LTR MaLR 346 480 -1483 9 1218 1127 82 7 0 chr17 83067626 83067772 -12204879 + B1_Mus1 SINE Alu 1 147 -1 9 1218 6298 182 103 135 chr17 83067772 83069322 -12203329 + ORR1A4-int LTR MaLR 481 1946 -17 9 1218 1446 177 3 75 chr17 83069330 83069623 -12203028 + ORR1A4 LTR MaLR 1 272 -57 9 1218 3741 155 53 30 chr17 83069624 83070417 -12202234 - L1_Mur2 LINE L1 -1367 4510 3700 9 1218 1124 169 17 4 chr17 83070416 83070647 -12202004 + Lx2B LINE L1 6045 6278 -722 9 1218 321 174 0 0 chr17 83070844 83070913 -12201738 + (TA)n Simple_repeat Simple_repeat 2 70 0 9 1218 1579 237 51 80 chr17 83071595 83072222 -12200429 - RMER19C LTR ERVK -2 609 1 9 1218 353 328 42 8 chr17 83072830 83072950 -12199701 + RSINE1 SINE B4 2 125 -40 9 1218 22 0 0 0 chr17 83072979 83073001 -12199650 + AT_rich Low_complexity Low_complexity 1 22 0 9 1218 21 0 0 0 chr17 83073531 83073552 -12199099 + GC_rich Low_complexity Low_complexity 1 21 0 1 1218 1483 141 132 16 chr17 83073942 83074259 -12198392 + Lx3A LINE L1 6626 6979 -2 1 1218 233 217 0 0 chr17 83074264 83074310 -12198341 + A-rich Low_complexity Low_complexity 2 47 0 1 1218 1222 228 120 0 chr17 83074585 83074918 -12197733 - MTD LTR MaLR -14 405 33 1 1218 35291 53 23 13 chr17 83074919 83076569 -12196082 - L1Md_T LINE L1 0 6585 4920 1 1218 231 183 46 77 chr17 83076569 83076634 -12196017 + RMER20A LTR ERVK 186 248 -268 1 1218 35291 53 23 13 chr17 83076634 83081224 -12191427 - L1Md_T LINE L1 0 4919 284 1 1218 387 0 0 0 chr17 83081819 83081862 -12190789 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1218 31057 39 52 8 chr17 83082090 83087161 -12185490 + L1Md_A LINE L1 299 5586 -297 1 1218 8382 38 0 0 chr17 83087161 83088156 -12184495 + L1Md_T LINE L1 5587 6581 -1 1 1218 31057 33 61 0 chr17 83088156 83088169 -12184482 + L1Md_A LINE L1 5587 5601 -282 1 1218 312 27 0 0 chr17 83088578 83088615 -12184036 + (TC)n Simple_repeat Simple_repeat 2 38 0 1 1218 333 0 0 0 chr17 83088615 83088651 -12184000 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1218 3403 133 38 35 chr17 83090114 83090691 -12181960 + Lx2A1 LINE L1 6415 6993 -15 1 1218 245 29 0 29 chr17 83090691 83090726 -12181925 + (TAA)n Simple_repeat Simple_repeat 1 34 0 1 1218 15367 66 4 0 chr17 83092995 83095139 -12177512 + L1_Mm LINE L1 2630 4781 -1102 1 1218 18392 97 11 12 chr17 83095132 83098525 -12174126 - L1Md_A LINE L1 -2052 3831 451 1 1218 1596 135 6 76 chr17 83098546 83098739 -12173912 - L1_Mm LINE L1 -600 5283 5112 1 1218 588 25 13 0 chr17 83098739 83098818 -12173833 - L1_Mus1 LINE L1 -10 6557 6478 1 1218 1596 135 6 76 chr17 83098818 83098952 -12173699 - L1_Mm LINE L1 -772 5111 4979 1 1218 308 237 41 10 chr17 83098961 83099059 -12173592 + Lx9 LINE L1 7536 7636 -8 1 1218 23 0 0 0 chr17 83099513 83099536 -12173115 + AT_rich Low_complexity Low_complexity 1 23 0 1 1219 478 105 35 0 chr17 83099866 83099952 -12172699 + (TTTC)n Simple_repeat Simple_repeat 3 91 0 1 1219 897 85 0 0 chr17 83099970 83100111 -12172540 + (TC)n Simple_repeat Simple_repeat 1 141 0 1 1219 407 239 141 0 chr17 83100111 83100203 -12172448 - B1_Mur2 SINE Alu -16 133 29 1 1219 427 288 82 9 chr17 83100408 83100639 -12172012 + L1MA5 LINE L1 6053 6300 0 1 1219 232 332 82 5 chr17 83101270 83101476 -12171175 + L1MD3 LINE L1 7116 7337 -705 1 1219 317 307 109 62 chr17 83101505 83101762 -12170889 + L1MD3 LINE L1 7471 7739 -256 1 1219 280 333 0 0 chr17 83101930 83102017 -12170634 + GA-rich Low_complexity Low_complexity 3 89 0 1 1219 741 325 77 42 chr17 83102077 83102551 -12170100 - MER44B DNA MER2_type -27 523 30 1 1219 411 21 0 0 chr17 83102556 83102604 -12170047 + (GA)n Simple_repeat Simple_repeat 2 49 0 1 1219 3838 258 56 8 chr17 83103129 83104151 -12168500 - Lx6 LINE L1 0 7460 6390 1 1219 1652 233 76 85 chr17 83104487 83105120 -12167531 - Lx6 LINE L1 -1106 6354 5728 1 1219 397 105 358 0 chr17 83105127 83105222 -12167429 + L1_Mur3 LINE L1 5191 5319 -561 1 1219 1687 127 45 14 chr17 83105224 83105511 -12167140 + BGLII_B LTR ERVK 92 387 -54 1 1219 491 82 14 0 chr17 83105518 83105591 -12167060 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 1 1219 1551 218 42 0 chr17 83105623 83105954 -12166697 + L1_Mur3 LINE L1 5354 5698 -182 1 1219 21 36 0 0 chr17 83105975 83106003 -12166648 + AT_rich Low_complexity Low_complexity 1 28 0 1 1219 198 71 0 0 chr17 83107011 83107039 -12165612 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1 1219 261 0 0 0 chr17 83107047 83107076 -12165575 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1219 508 99 69 43 chr17 83108537 83108653 -12163998 + L1Md_F2 LINE L1 6463 6581 -1 1 1219 906 101 20 0 chr17 83109479 83109628 -12163023 + (TAGA)n Simple_repeat Simple_repeat 1 152 0 1 1219 234 0 0 0 chr17 83109682 83109708 -12162943 + (CATA)n Simple_repeat Simple_repeat 3 28 0 1 1219 21 0 0 0 chr17 83110049 83110070 -12162581 + AT_rich Low_complexity Low_complexity 1 21 0 1 1219 1894 88 26 0 chr17 83111077 83111349 -12161302 - L1_Mus1 LINE L1 0 6567 6289 1 1219 514 284 141 46 chr17 83113056 83113324 -12159327 + Lx9 LINE L1 7258 7565 -79 1 1219 549 0 0 0 chr17 83113324 83113385 -12159266 + (GA)n Simple_repeat Simple_repeat 1 61 0 1 1219 514 284 141 46 chr17 83113385 83113463 -12159188 + Lx9 LINE L1 7566 7637 -7 1 1219 574 269 116 7 chr17 83113467 83113752 -12158899 + Lx9 LINE L1 7316 7631 -13 1 1219 7642 78 6 1 chr17 83113749 83114901 -12157750 - L1_Mus3 LINE L1 -6 6632 5475 1 1219 804 109 22 0 chr17 83114900 83115037 -12157614 + MusHAL1 LINE L1 723 862 -1850 1 1219 24 0 0 0 chr17 83115057 83115081 -12157570 + AT_rich Low_complexity Low_complexity 1 24 0 1 1219 6412 31 0 0 chr17 83115687 83116439 -12156212 - L1Md_A LINE L1 -1 6584 5833 1 1219 3374 41 7 0 chr17 83116436 83116848 -12155803 + L1Md_T LINE L1 6168 6582 0 1 1219 34814 58 18 4 chr17 83116856 83122214 -12150437 - L1Md_A LINE L1 -198 5688 159 1 1219 24 0 0 0 chr17 83122227 83122251 -12150400 + AT_rich Low_complexity Low_complexity 1 24 0 1 1219 252 0 0 0 chr17 83122276 83122304 -12150347 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 1 1219 522 0 0 0 chr17 83122307 83122365 -12150286 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 1219 221 368 64 29 chr17 83123018 83123158 -12149493 + MIRb SINE MIR 5 149 -119 1 1219 285 325 0 0 chr17 83123952 83124043 -12148608 - BC1_Mm scRNA scRNA -59 93 3 1 1219 261 362 52 19 chr17 83124581 83124736 -12147915 + MIR3 SINE MIR 37 196 -12 1 1219 192 389 148 0 chr17 83125137 83125245 -12147406 - MIRb SINE MIR -132 136 13 1 1219 623 234 203 34 chr17 83125805 83126120 -12146531 - MTD LTR MaLR 0 379 41 1 1219 411 21 0 0 chr17 83126125 83126173 -12146478 + (CATA)n Simple_repeat Simple_repeat 4 51 0 1 1219 468 0 0 0 chr17 83127664 83127716 -12144935 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1219 796 317 4 9 chr17 83127790 83128016 -12144635 - B4A SINE B4 -66 226 2 1 1219 180 336 74 30 chr17 83128881 83129016 -12143635 + L2 LINE L2 2055 2195 -1224 1 1219 410 387 60 35 chr17 83129948 83130232 -12142419 + MLT1K LTR MaLR 127 417 -178 1 1219 408 304 66 26 chr17 83132104 83132256 -12140395 - MER58B DNA MER1_type -17 324 167 1 1219 325 339 141 58 chr17 83133416 83133798 -12138853 - L2 LINE L2 -866 2553 2140 1 1219 1144 291 44 28 chr17 83133820 83134389 -12138262 + Lx9 LINE L1 6840 7417 -227 1 1219 412 133 9 19 chr17 83134430 83134537 -12138114 + (TCTCTG)n Simple_repeat Simple_repeat 2 107 0 1 1219 344 123 0 17 chr17 83134537 83134595 -12138056 - HAL1-3A_ME LINE L1 -824 2034 1978 1 1219 440 146 10 0 chr17 83134598 83134701 -12137950 + CT-rich Low_complexity Low_complexity 1 104 0 1 1219 405 0 0 0 chr17 83134701 83134746 -12137905 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1219 260 315 169 21 chr17 83134887 83135130 -12137521 - L2 LINE L2 -1308 2111 1833 1 1219 380 229 71 35 chr17 83136143 83136256 -12136395 + PB1D9 SINE Alu 3 119 -1 1 1219 232 91 45 0 chr17 83136256 83136300 -12136351 + (GGGAGA)n Simple_repeat Simple_repeat 3 48 0 1 1219 357 24 0 0 chr17 83136385 83136427 -12136224 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1219 486 0 0 0 chr17 83136514 83136568 -12136083 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 1 1219 21 89 0 0 chr17 83136737 83136793 -12135858 + AT_rich Low_complexity Low_complexity 1 56 0 1 1219 2148 181 7 48 chr17 83136802 83137256 -12135395 - Lx LINE L1 0 6654 6220 1 1219 4527 107 3 0 chr17 83137261 83138197 -12134454 + Lx LINE L1 5301 6240 -414 1 1219 692 288 9 13 chr17 83138499 83138724 -12133927 - Lx7 LINE L1 -449 7247 7024 1 1219 23 33 0 0 chr17 83138874 83138904 -12133747 + AT_rich Low_complexity Low_complexity 1 30 0 1 1219 271 60 20 20 chr17 83139127 83139178 -12133473 + (TTAA)n Simple_repeat Simple_repeat 2 52 0 1 1219 216 0 0 0 chr17 83139194 83139218 -12133433 + (TC)n Simple_repeat Simple_repeat 1 24 0 1 1219 390 21 0 0 chr17 83139218 83139264 -12133387 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1219 465 272 0 9 chr17 83139825 83139940 -12132711 + B3A SINE B2 5 118 -80 1 1219 380 292 93 6 chr17 83140348 83140520 -12132131 - Lx8 LINE L1 -73 7400 7214 1 1219 659 309 42 65 chr17 83140531 83140565 -12132086 - B3 SINE B2 -6 210 183 1 1219 414 0 0 0 chr17 83140565 83140611 -12132040 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1219 745 309 42 65 chr17 83140611 83140791 -12131860 - B3A SINE B2 -34 182 1 1 1219 1189 223 77 69 chr17 83141213 83141589 -12131062 - ORR1C2 LTR MaLR -5 379 1 1 1219 183 80 0 0 chr17 83141678 83141703 -12130948 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1219 475 343 108 50 chr17 83144602 83144860 -12127791 - B4 SINE B4 -18 274 2 1 1219 562 278 19 23 chr17 83145059 83145273 -12127378 - Lx9 LINE L1 -631 7013 6801 1 1219 1163 231 84 12 chr17 83145272 83145592 -12127059 + Lx9 LINE L1 7174 7516 -128 1 1219 558 203 0 0 chr17 83145593 83145711 -12126940 + (TA)n Simple_repeat Simple_repeat 1 118 0 1 1219 355 217 51 32 chr17 83145712 83145869 -12126782 + Lx9 LINE L1 7477 7636 -8 1 1219 15595 90 18 11 chr17 83146106 83149248 -12123403 + L1Md_F LINE L1 373 3535 -2348 1 1219 3189 67 64 16 chr17 83149248 83149701 -12122950 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1219 6464 42 2 17 chr17 83149701 83150542 -12122109 - IAPEz-int LTR ERVK 0 6481 5653 1 1219 2494 85 0 3 chr17 83150537 83150880 -12121771 - IAPEz-int LTR ERVK -4781 1700 1359 1 1219 3351 60 3 13 chr17 83150880 83151532 -12121119 - IAPEz-int LTR ERVK -5819 662 168 1 1219 248 302 0 0 chr17 83151532 83151585 -12121066 - RLTR27 LTR ERVK -34 275 223 1 1219 808 130 27 87 chr17 83151585 83151770 -12120881 - IAPEz-int LTR ERVK -6286 195 22 1 1219 357 56 0 0 chr17 83151773 83151827 -12120824 - IAPEz-int LTR ERVK -1931 56 3 1 1219 3211 61 73 18 chr17 83151829 83152279 -12120372 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1219 13669 69 54 1 chr17 83152279 83154234 -12118417 + L1Md_F2 LINE L1 3530 5587 -296 1 1219 7626 67 1 4 chr17 83154235 83155213 -12117438 + L1Md_F2 LINE L1 5589 6563 -19 1 1219 197 352 67 0 chr17 83156670 83156775 -12115876 + L4 LINE RTE 690 801 -1228 1 1219 225 276 93 28 chr17 83156877 83156985 -12115666 - MLT1F2 LTR MaLR -81 488 374 1 1219 344 351 14 63 chr17 83157142 83157285 -12115366 - MLT1F2 LTR MaLR -339 221 86 1 1219 381 361 73 15 chr17 83157318 83157523 -12115128 + Tigger5 DNA MER2_type 2 218 -2188 1 1219 9715 126 25 6 chr17 83157589 83160229 -12112422 + Lx4A LINE L1 4244 6946 -112 1 1219 471 96 27 0 chr17 83160222 83160295 -12112356 + L1_Mur2 LINE L1 5521 5595 -282 1 1219 640 345 57 15 chr17 83160282 83160615 -12112036 + Lx8 LINE L1 6654 7000 -473 1 1219 1001 306 53 28 chr17 83160990 83161327 -12111324 - MT2A LTR ERVL -46 487 139 1 1219 246 32 0 0 chr17 83161327 83161358 -12111293 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1219 1001 306 53 28 chr17 83161358 83161490 -12111161 - MT2A LTR ERVL -395 138 6 1 1219 982 92 0 78 chr17 83161523 83161676 -12110975 + B1_Mus1 SINE Alu 2 142 -6 2 1219 357 24 0 0 chr17 83161677 83161719 -12110932 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 2 1219 1221 85 0 0 chr17 83161721 83161897 -12110754 + (GGAA)n Simple_repeat Simple_repeat 3 178 0 2 1219 304 202 12 23 chr17 83161897 83161983 -12110668 + GA-rich Low_complexity Low_complexity 1 85 0 2 1219 2759 226 65 98 chr17 83162311 83163284 -12109367 + Lx7 LINE L1 6756 7696 0 2 1219 2580 62 0 6 chr17 83167022 83167361 -12105290 + IAPLTR4 LTR ERVK 1 337 -8 2 1219 400 254 61 11 chr17 83167365 83167554 -12105097 - L1MA7 LINE L1 -381 5919 5717 2 1219 25 0 0 0 chr17 83168169 83168194 -12104457 + AT_rich Low_complexity Low_complexity 1 25 0 2 1219 490 289 7 82 chr17 83168360 83168498 -12104153 + RSINE1 SINE B4 28 156 -9 2 1219 423 56 0 0 chr17 83168498 83168552 -12104099 + (TGGA)n Simple_repeat Simple_repeat 1 54 0 2 1219 193 258 52 122 chr17 83168687 83168859 -12103792 - L3 LINE CR1 -4242 247 88 2 1219 1574 162 54 135 chr17 83169199 83169606 -12103045 + ORR1C1 LTR MaLR 5 378 0 2 1219 561 30 0 0 chr17 83170513 83170580 -12102071 + (GA)n Simple_repeat Simple_repeat 2 68 0 2 1219 372 216 23 146 chr17 83171078 83171105 -12101546 + MT2B LTR ERVL 144 154 -447 2 1219 752 175 0 0 chr17 83171105 83171231 -12101420 + B1_Mus1 SINE Alu 1 126 -22 2 1219 543 170 0 0 chr17 83171231 83171331 -12101320 + GA-rich Low_complexity Low_complexity 1 100 0 2 1219 555 310 56 7 chr17 83171904 83172047 -12100604 + RSINE1 SINE B4 2 151 -14 2 1219 369 0 0 0 chr17 83172049 83172090 -12100561 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1219 307 266 26 9 chr17 83172548 83172662 -12099989 + (TA)n Simple_repeat Simple_repeat 2 117 0 2 1219 351 327 182 68 chr17 83173253 83173381 -12099270 - MTEa LTR MaLR -116 263 102 2 1219 414 0 0 0 chr17 83173381 83173427 -12099224 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1219 351 327 182 68 chr17 83173427 83173534 -12099117 - MTEa LTR MaLR -278 101 1 2 1219 345 342 85 75 chr17 83174281 83174657 -12097994 + MLT1J LTR MaLR 114 493 -19 2 1219 329 263 105 33 chr17 83175911 83176092 -12096559 - MLT2C2 LTR ERVL -254 210 17 2 1219 21 0 0 0 chr17 83176638 83176659 -12095992 + AT_rich Low_complexity Low_complexity 1 21 0 2 1219 360 0 0 0 chr17 83177252 83177292 -12095359 + (TTG)n Simple_repeat Simple_repeat 1 40 0 2 1219 423 0 0 0 chr17 83177292 83177339 -12095312 + (TTC)n Simple_repeat Simple_repeat 2 48 0 2 1219 405 0 0 0 chr17 83177394 83177439 -12095212 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1219 298 294 53 96 chr17 83177477 83177759 -12094892 - B4A SINE B4 -18 274 5 2 1219 355 198 2 7 chr17 83177931 83178001 -12094650 - B1F SINE Alu -220 75 10 2 1219 314 268 0 27 chr17 83177941 83178014 -12094637 - B4A SINE B4 -140 152 82 2 1219 274 311 113 77 chr17 83178169 83178364 -12094287 - MER102c DNA MER1_type -36 295 94 2 1219 559 0 28 0 chr17 83178409 83178480 -12094171 + (TA)n Simple_repeat Simple_repeat 1 73 0 2 1219 185 267 44 0 chr17 83179393 83179438 -12093213 - MIRb SINE MIR -215 53 7 2 1219 288 53 0 0 chr17 83180005 83180043 -12092608 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1219 632 327 0 0 chr17 83180047 83180209 -12092442 + RSINE1 SINE B4 3 164 -1 2 1219 1044 334 23 13 chr17 83182328 83182798 -12089853 + Lx8 LINE L1 6568 7042 -431 2 1219 6808 171 59 15 chr17 83183226 83185421 -12087230 + Lx5 LINE L1 4515 6841 -217 2 1219 442 0 0 33 chr17 83185421 83185481 -12087170 + (CCTG)n Simple_repeat Simple_repeat 1 58 0 2 1219 5043 216 74 26 chr17 83185481 83185710 -12086941 + Lx5 LINE L1 6819 7049 -1 2 1219 27 29 0 0 chr17 83185710 83185744 -12086907 + AT_rich Low_complexity Low_complexity 1 34 0 2 1219 270 263 0 0 chr17 83186418 83186475 -12086176 + ID2 SINE ID 1 57 -26 2 1219 558 294 28 0 chr17 83187065 83187208 -12085443 + ID_B1 SINE B4 78 224 0 2 1219 283 357 43 63 chr17 83187656 83187910 -12084741 - MLT1J LTR MaLR -263 249 1 2 1219 22 35 0 0 chr17 83188498 83188527 -12084124 + AT_rich Low_complexity Low_complexity 1 29 0 2 1219 21 82 0 0 chr17 83189285 83189334 -12083317 + AT_rich Low_complexity Low_complexity 1 49 0 2 1219 180 103 121 0 chr17 83189341 83189399 -12083252 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 2 1219 203 103 89 13 chr17 83189474 83189553 -12083098 + (TTATA)n Simple_repeat Simple_repeat 5 89 0 2 1219 211 234 21 0 chr17 83189835 83189882 -12082769 + (TATG)n Simple_repeat Simple_repeat 3 50 0 2 1219 2140 211 49 78 chr17 83189983 83190599 -12082052 + RMER1B Other Other 468 1065 -1 2 1219 243 88 0 0 chr17 83191894 83191928 -12080723 + (CTTG)n Simple_repeat Simple_repeat 2 35 0 2 1219 209 195 0 24 chr17 83192661 83192703 -12079948 + GA-rich Low_complexity Low_complexity 2 42 0 2 1219 253 192 40 27 chr17 83192884 83192959 -12079692 + A-rich Low_complexity Low_complexity 4 79 0 2 1219 22931 107 31 10 chr17 83192961 83197312 -12075339 + L1_Mur1 LINE L1 209 4666 -1220 2 1219 38037 28 0 6 chr17 83197311 83203475 -12069176 - L1Md_T LINE L1 0 6582 462 2 1219 3566 59 37 0 chr17 83203476 83203985 -12068666 + L1_Mur1 LINE L1 4652 5179 -707 2 1219 3200 103 20 0 chr17 83203985 83204440 -12068211 + Lx3_Mus LINE L1 6546 7009 0 2 1219 241 320 57 28 chr17 83204477 83204583 -12068068 - PB1D10 SINE Alu -7 110 2 2 1219 2935 107 108 15 chr17 83204803 83205277 -12067374 + Lx3C LINE L1 6457 6974 -2 2 1219 914 90 11 33 chr17 83205803 83205986 -12066665 + (TAGA)n Simple_repeat Simple_repeat 1 179 0 2 1219 358 327 111 14 chr17 83206114 83206483 -12066168 + L1M5 LINE L1 5317 5721 -519 2 1219 329 219 31 0 chr17 83206712 83206776 -12065875 + RSINE1 SINE B4 69 134 -31 2 1219 287 78 20 0 chr17 83206780 83206831 -12065820 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1219 233 98 0 24 chr17 83206835 83206877 -12065774 + (TAA)n Simple_repeat Simple_repeat 2 42 0 2 1219 279 203 29 0 chr17 83206882 83206951 -12065700 - L1_Mur3 LINE L1 -1579 4301 4231 2 1219 5486 93 53 12 chr17 83206976 83207805 -12064846 - Lx LINE L1 -9 6645 5783 2 1219 6817 70 11 35 chr17 83207808 83208881 -12063770 - L1_Mus2 LINE L1 0 6566 5520 2 1219 261 262 47 12 chr17 83208885 83208970 -12063681 - ORR1D2 LTR MaLR -41 329 242 2 1219 303 340 39 32 chr17 83209033 83209188 -12063463 - L1M5 LINE L1 -2547 3599 3444 2 1219 279 292 90 0 chr17 83209412 83209501 -12063150 + ID_B1 SINE B4 80 176 -48 2 1219 305 302 69 11 chr17 83209423 83209510 -12063141 + PB1D10 SINE Alu 13 104 -13 2 1219 29 0 0 0 chr17 83209670 83209699 -12062952 + AT_rich Low_complexity Low_complexity 1 29 0 2 1219 564 15 0 0 chr17 83209766 83209831 -12062820 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 2 1219 1936 110 37 3 chr17 83209832 83210132 -12062519 + ORR1A2 LTR MaLR 16 325 -2 2 1219 447 106 0 0 chr17 83210145 83210211 -12062440 + (TCTCTG)n Simple_repeat Simple_repeat 5 70 0 2 1219 193 164 109 0 chr17 83210215 83210343 -12062308 + (CCTG)n Simple_repeat Simple_repeat 2 143 0 2 1219 519 215 8 0 chr17 83210333 83210813 -12061838 + CT-rich Low_complexity Low_complexity 1 484 0 2 1219 581 203 6 0 chr17 83210831 83211008 -12061643 + CT-rich Low_complexity Low_complexity 2 179 0 2 1219 225 235 0 0 chr17 83211008 83211059 -12061592 + (CCTG)n Simple_repeat Simple_repeat 3 53 0 2 1219 455 196 45 7 chr17 83211059 83211213 -12061438 + (TCTCTG)n Simple_repeat Simple_repeat 3 162 0 2 1219 297 259 24 0 chr17 83212583 83212668 -12059983 + (TAGA)n Simple_repeat Simple_repeat 2 88 0 2 1219 24 32 0 0 chr17 83212700 83212731 -12059920 + AT_rich Low_complexity Low_complexity 1 31 0 2 1219 180 0 0 0 chr17 83213072 83213092 -12059559 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1219 30 0 0 0 chr17 83213253 83213283 -12059368 + AT_rich Low_complexity Low_complexity 1 30 0 2 1219 274 259 0 0 chr17 83213288 83213346 -12059305 - RMER15 LTR ERVL -115 460 403 2 1219 2110 279 52 28 chr17 83213563 83214318 -12058333 - Lx8 LINE L1 -480 6993 6221 2 1219 341 353 83 6 chr17 83214666 83214834 -12057817 - MIR SINE MIR -33 229 49 2 1219 263 138 45 15 chr17 83214835 83214901 -12057750 + A-rich Low_complexity Low_complexity 1 68 0 2 1219 483 18 0 0 chr17 83215039 83215095 -12057556 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 1219 300 143 0 0 chr17 83216314 83216356 -12056295 + HAL1-3A_ME LINE L1 1970 2011 -847 2 1219 409 225 7 7 chr17 83216359 83216511 -12056140 + (CA)n Simple_repeat Simple_repeat 1 152 0 2 1219 210 37 0 0 chr17 83216513 83216540 -12056111 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1219 251 289 11 32 chr17 83217490 83217583 -12055068 - MLT1D LTR MaLR 0 680 590 2 1219 291 283 122 66 chr17 83217657 83217915 -12054736 - MLT1D LTR MaLR -339 288 26 2 1219 3263 53 0 12 chr17 83218222 83218641 -12054010 + L1Md_F2 LINE L1 6168 6581 -1 2 1219 369 0 0 0 chr17 83218780 83218821 -12053830 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1219 183 351 145 62 chr17 83218906 83219292 -12053359 + L2a LINE L2 3008 3425 -1 2 1219 216 252 242 8 chr17 83219415 83219535 -12053116 - MIRb SINE MIR -8 260 113 2 1219 1141 282 15 62 chr17 83219638 83219678 -12052973 - MTE2a LTR MaLR -2 377 344 2 1219 2011 169 44 11 chr17 83219678 83220044 -12052607 - ORR1C1 LTR MaLR 0 378 1 2 1219 1141 282 15 62 chr17 83220044 83220183 -12052468 - MTE2a LTR MaLR -36 343 208 2 1219 939 77 100 0 chr17 83220183 83220313 -12052338 + B1_Mm SINE Alu 1 143 -4 2 1219 980 111 0 7 chr17 83220316 83220470 -12052181 + (GAAA)n Simple_repeat Simple_repeat 2 154 0 2 1219 1141 291 29 72 chr17 83220470 83220712 -12051939 - MTE2a LTR MaLR -163 256 8 2 1219 295 333 103 17 chr17 83220721 83220837 -12051814 - MIR SINE MIR -107 155 30 2 1219 187 328 78 0 chr17 83220881 83220945 -12051706 + MER5A DNA MER1_type 26 94 -95 2 1219 330 270 188 15 chr17 83221068 83221339 -12051312 - HAL1b LINE L1 -217 1792 1475 3 1219 423 343 138 38 chr17 83221724 83222361 -12050290 - HAL1b LINE L1 -998 1011 311 3 1219 270 288 108 31 chr17 83223330 83223459 -12049192 - MTD LTR MaLR 0 419 281 3 1219 185 219 49 0 chr17 83223723 83223764 -12048887 - L2 LINE L2 -586 2833 2791 3 1219 1807 188 70 26 chr17 83224569 83224956 -12047695 + MTD LTR MaLR 3 406 -13 3 1219 219 224 0 18 chr17 83225265 83225382 -12047269 + GA-rich Low_complexity Low_complexity 1 114 0 3 1219 994 273 63 0 chr17 83225729 83226000 -12046651 + Lx8 LINE L1 6559 6846 -627 3 1219 611 227 132 7 chr17 83226587 83226738 -12045913 - B3 SINE B2 0 216 47 3 1219 597 349 89 23 chr17 83226899 83227383 -12045268 + Lx8 LINE L1 6874 7389 -84 3 1219 186 43 0 0 chr17 83227470 83227493 -12045158 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 3 1219 614 282 186 23 chr17 83227968 83228341 -12044310 - L1M3 LINE L1 -491 5677 5236 3 1219 1817 23 0 36 chr17 83228341 83228565 -12044086 + L1Md_F2 LINE L1 6364 6579 -3 3 1219 614 272 145 55 chr17 83228565 83228831 -12043820 - L1M3 LINE L1 -905 5235 4942 3 1219 201 147 0 0 chr17 83228908 83228942 -12043709 + (T)n Simple_repeat Simple_repeat 1 34 0 3 1219 21 82 0 0 chr17 83229130 83229179 -12043472 + AT_rich Low_complexity Low_complexity 1 49 0 3 1219 320 268 81 11 chr17 83229333 83229420 -12043231 + B4 SINE B4 1 93 -199 3 1219 396 262 39 10 chr17 83229434 83229538 -12043113 + B4A SINE B4 166 272 -20 3 1219 519 17 0 0 chr17 83229570 83229630 -12043021 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 1219 342 0 0 0 chr17 83229875 83229913 -12042738 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1219 354 321 45 8 chr17 83229924 83230056 -12042595 + MIRb SINE MIR 63 199 -69 3 152 309 159 0 0 chr17 83230682 83230745 -12041906 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1220 637 278 32 44 chr17 83230748 83230906 -12041745 - RSINE1 SINE B4 0 165 10 3 1220 1241 224 47 13 chr17 83231115 83231526 -12041125 - Lx9 LINE L1 -1 7643 7196 3 1220 4805 44 36 0 chr17 83232223 83232772 -12039879 - L1Md_F2 LINE L1 -3 6579 6011 3 1220 1947 203 24 20 chr17 83232787 83233221 -12039430 + RLTR16 LTR ERVK 1 397 -108 3 1220 614 21 53 11 chr17 83233227 83233322 -12039329 + (TCTCCC)n Simple_repeat Simple_repeat 5 103 0 3 1220 769 157 8 0 chr17 83233426 83233560 -12039091 + Lx4A LINE L1 6924 7058 0 3 1220 370 304 88 16 chr17 83233627 83233945 -12038706 - L1MC1 LINE L1 -64 6269 5929 3 1220 627 312 124 13 chr17 83235249 83235548 -12037103 + MT2A LTR ERVL 192 523 -10 3 1220 23 54 0 0 chr17 83236969 83237006 -12035645 + AT_rich Low_complexity Low_complexity 1 37 0 3 1220 313 211 285 24 chr17 83237102 83237267 -12035384 + Lx8 LINE L1 7266 7473 0 3 1220 250 341 41 69 chr17 83237710 83237855 -12034796 + MARNA DNA Mariner 53 193 -393 3 1220 503 245 0 0 chr17 83237874 83237980 -12034671 - PB1D10 SINE Alu -1 116 11 3 1220 335 308 29 0 chr17 83237895 83237999 -12034652 - ID_B1 SINE B4 -48 176 70 3 1220 327 163 86 11 chr17 83238083 83238176 -12034475 - Lx9 LINE L1 0 7644 7545 3 1220 2218 204 16 59 chr17 83238176 83238682 -12033969 + Lx9 LINE L1 6602 7085 -559 3 1220 523 251 158 9 chr17 83238692 83238913 -12033738 - L1MA6 LINE L1 -2 6298 6045 3 1220 24 0 0 0 chr17 83239395 83239419 -12033232 + AT_rich Low_complexity Low_complexity 1 24 0 3 1220 2118 141 53 3 chr17 83239428 83239770 -12032881 - RLTR15 LTR ERVK 0 359 1 3 1220 192 135 0 0 chr17 83240013 83240050 -12032601 + (TATG)n Simple_repeat Simple_repeat 2 38 0 3 1220 239 151 37 19 chr17 83240052 83240106 -12032545 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 3 1220 251 238 61 0 chr17 83240605 83240769 -12031882 + (CTCTG)n Simple_repeat Simple_repeat 1 174 0 3 1220 240 274 40 27 chr17 83241462 83241537 -12031114 - MTEb LTR MaLR -14 365 290 3 1220 235 317 113 8 chr17 83241641 83241765 -12030886 - MTEb LTR MaLR -222 137 1 3 1220 405 326 38 64 chr17 83243208 83243365 -12029286 + MLT1E2 LTR MaLR 388 540 -87 3 1220 3407 228 102 24 chr17 83243823 83244051 -12028600 - Lx7 LINE L1 0 7696 7430 3 1220 1205 61 0 7 chr17 83244051 83244199 -12028452 + B1_Mus1 SINE Alu 2 148 0 3 1220 3407 228 102 24 chr17 83244199 83244222 -12028429 - Lx7 LINE L1 -267 7429 7380 3 1220 371 73 18 0 chr17 83244222 83244277 -12028374 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 1220 3407 228 102 24 chr17 83244277 83244970 -12027681 - Lx7 LINE L1 -317 7379 6677 3 1220 4137 184 68 34 chr17 83245340 83246342 -12026309 + Lx7 LINE L1 5493 6560 -1136 3 1220 1134 189 15 0 chr17 83247102 83247303 -12025348 + Lx7 LINE L1 6557 6760 -936 3 1220 340 136 23 0 chr17 83247303 83247391 -12025260 + A-rich Low_complexity Low_complexity 2 91 0 3 1220 1710 229 108 37 chr17 83247420 83247956 -12024695 + Lx7 LINE L1 7123 7696 0 3 1220 894 179 8 0 chr17 83248071 83248294 -12024357 + GA-rich Low_complexity Low_complexity 1 224 0 3 1220 243 0 0 0 chr17 83248778 83248805 -12023846 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1220 2690 28 2 278 chr17 83249317 83249856 -12022795 - RLTR10 LTR ERVK 0 390 1 3 1220 8917 18 0 2 chr17 83249858 83250855 -12021796 - RLTR10-int LTR ERVK -3 1984 990 3 1220 7690 42 7 0 chr17 83250949 83251866 -12020785 - RLTR10-int LTR ERVK -1034 953 1 3 1220 2616 26 2 300 chr17 83251866 83252422 -12020229 - RLTR10 LTR ERVK 0 390 1 3 1220 206 311 0 39 chr17 83252986 83253063 -12019588 - L2c LINE L2 -58 3329 3256 3 1220 1135 247 134 15 chr17 83253124 83253453 -12019198 + ORR1D2 LTR MaLR 3 370 0 3 1220 448 303 194 5 chr17 83254914 83255136 -12017515 + B4A SINE B4 29 292 0 3 1220 263 233 33 0 chr17 83255092 83255152 -12017499 + B3A SINE B2 121 182 -16 3 1220 556 207 132 0 chr17 83255178 83255299 -12017352 + B3 SINE B2 7 143 -73 3 1220 342 227 144 48 chr17 83255315 83255440 -12017211 - LTR48 LTR ERV1 -650 137 1 3 1220 752 141 126 13 chr17 83257631 83257782 -12014869 + URR1B DNA MER1_type 58 225 0 3 1220 680 142 91 8 chr17 83257918 83258039 -12014612 + B1_Mur4 SINE Alu 2 132 -18 3 1220 1535 264 56 45 chr17 83258051 83258704 -12013947 - L1M2 LINE L1 -790 5057 4423 3 1220 379 0 0 38 chr17 83258953 83259006 -12013645 + (TTTG)n Simple_repeat Simple_repeat 1 51 0 3 1220 23 0 0 0 chr17 83259195 83259218 -12013433 + AT_rich Low_complexity Low_complexity 1 23 0 3 1220 209 333 39 0 chr17 83260197 83260275 -12012376 - L2b LINE L2 -1 3374 3294 3 1220 270 338 110 37 chr17 83261218 83261381 -12011270 - MIR SINE MIR -25 237 63 3 1220 734 311 132 32 chr17 83261799 83262141 -12010510 - MLT1B LTR MaLR -14 376 1 3 1220 357 125 0 0 chr17 83262797 83262853 -12009798 + (TA)n Simple_repeat Simple_repeat 2 57 0 3 1220 613 202 22 25 chr17 83263543 83263714 -12008937 + B3 SINE B2 1 172 -23 3 1220 253 385 84 65 chr17 83264241 83264516 -12008135 - B4 SINE B4 -11 281 2 3 1220 408 331 45 65 chr17 83265108 83265263 -12007388 + RSINE1 SINE B4 3 154 -11 3 1220 1116 239 5 5 chr17 83265313 83265523 -12007128 - B3 SINE B2 -5 211 2 3 1220 4411 199 20 14 chr17 83266249 83267045 -12005606 - Lx5 LINE L1 -5 7045 6245 3 1220 626 117 11 0 chr17 83267057 83267151 -12005500 + L1_Mur2 LINE L1 4832 4926 -951 3 1220 1438 188 8 4 chr17 83267151 83267269 -12005382 + L1_Mur2 LINE L1 5164 5281 -596 3 1220 6530 86 42 20 chr17 83267269 83268043 -12004608 + Lx LINE L1 5741 6518 -136 3 1220 180 0 0 0 chr17 83268043 83268063 -12004588 + (TGGG)n Simple_repeat Simple_repeat 2 21 0 3 1220 6530 86 42 20 chr17 83268063 83268178 -12004473 + Lx LINE L1 6519 6648 -6 3 1220 1438 188 8 4 chr17 83268178 83268326 -12004325 + L1_Mur2 LINE L1 5282 5431 -446 3 1220 447 333 131 5 chr17 83268801 83269000 -12003651 + B4A SINE B4 28 251 -41 3 1220 289 281 0 0 chr17 83269003 83269085 -12003566 + (TG)n Simple_repeat Simple_repeat 1 82 0 3 1220 1152 70 0 34 chr17 83269862 83270000 -12002651 + B1_Mus1 SINE Alu 1 137 -11 3 1220 656 24 0 12 chr17 83270000 83270083 -12002568 + (GAAA)n Simple_repeat Simple_repeat 2 83 0 3 1220 465 19 0 0 chr17 83270330 83270384 -12002267 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 1220 207 0 0 0 chr17 83270385 83270408 -12002243 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 1220 194 358 119 0 chr17 83270765 83270899 -12001752 - L2 LINE L2 -411 3008 2859 3 1220 484 294 14 7 chr17 83271385 83271529 -12001122 - RSINE1 SINE B4 -16 149 5 3 1220 279 79 0 0 chr17 83272251 83272289 -12000362 + (GA)n Simple_repeat Simple_repeat 2 39 0 3 1220 513 0 0 0 chr17 83272289 83272346 -12000305 + (GGAA)n Simple_repeat Simple_repeat 4 60 0 3 1220 1089 114 73 17 chr17 83272363 83272541 -12000110 + B2_Mm2 SINE B2 4 191 -4 3 1220 21 0 0 0 chr17 83273039 83273060 -11999591 + AT_rich Low_complexity Low_complexity 1 21 0 3 1220 806 296 91 34 chr17 83273548 83273964 -11998687 + RLTR12B LTR ERVK 47 486 -42 3 1220 831 205 0 40 chr17 83274129 83274302 -11998349 - URR1B DNA MER1_type -3 222 57 3 1220 7930 64 7 0 chr17 83274304 83275383 -11997268 - L1_Mus1 LINE L1 0 6654 5489 3 1220 955 279 5 14 chr17 83276083 83276294 -11996357 + B3 SINE B2 2 210 -6 3 1220 265 329 112 12 chr17 83277762 83277931 -11994720 - MIRb SINE MIR -46 222 37 3 1220 622 303 139 10 chr17 83278140 83278443 -11994208 - MLT1H LTR MaLR -207 342 1 3 1220 245 217 0 0 chr17 83278444 83278490 -11994161 + MIRc SINE MIR 205 250 -18 3 1220 25 0 0 0 chr17 83278976 83279001 -11993650 + AT_rich Low_complexity Low_complexity 1 25 0 3 1220 266 288 11 81 chr17 83279163 83279250 -11993401 + MER5B DNA MER1_type 17 97 -81 3 1220 203 259 26 95 chr17 83279269 83279344 -11993307 + MIR SINE MIR 75 149 -59 3 1220 21 57 0 0 chr17 83279930 83279965 -11992686 + AT_rich Low_complexity Low_complexity 1 35 0 3 1220 307 297 14 0 chr17 83280087 83280161 -11992490 - ID2 SINE ID 0 83 9 3 1220 2349 153 5 24 chr17 83280181 83280555 -11992096 + ORR1B2 LTR MaLR 1 367 0 3 1220 493 300 126 0 chr17 83280950 83281140 -11991511 + MER58A DNA MER1_type 10 223 -1 3 1220 194 278 19 0 chr17 83281349 83281403 -11991248 - MIR SINE MIR -61 147 93 3 1220 408 55 0 0 chr17 83281530 83281585 -11991066 + (TC)n Simple_repeat Simple_repeat 1 55 0 3 1220 1447 158 4 36 chr17 83281585 83281861 -11990790 - Lx4A LINE L1 0 7058 6792 3 1220 1630 176 62 7 chr17 83281967 83282259 -11990392 + MTC LTR MaLR 114 421 0 4 1220 330 328 33 16 chr17 83282510 83282631 -11990020 - L3 LINE CR1 -28 4461 4339 4 1220 315 330 24 48 chr17 83282920 83283044 -11989607 + RSINE1 SINE B4 13 133 -32 4 1220 510 114 0 0 chr17 83283044 83283123 -11989528 + (CA)n Simple_repeat Simple_repeat 1 79 0 4 1220 343 275 58 78 chr17 83283322 83283476 -11989175 + L3 LINE CR1 2785 2935 -1554 4 1220 2886 33 3 0 chr17 83284117 83284453 -11988198 + L1Md_F2 LINE L1 5250 5586 -297 4 1220 8495 43 11 2 chr17 83284454 83285439 -11987212 + L1Md_F2 LINE L1 5588 6581 -1 4 1220 5954 35 0 0 chr17 83285528 83286190 -11986461 + L1Md_A LINE L1 5921 6582 0 4 1220 1249 49 0 0 chr17 83286618 83286760 -11985891 + B1_Mus1 SINE Alu 1 142 -6 4 1220 414 0 0 0 chr17 83286762 83286808 -11985843 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 4 1220 2208 123 32 72 chr17 83287622 83288024 -11984627 + ORR1B1 LTR MaLR 1 386 -8 4 1220 210 234 0 0 chr17 83288112 83288159 -11984492 - B1_Mus1 SINE Alu -92 56 10 4 1220 313 276 58 48 chr17 83288197 83288300 -11984351 - MER81 DNA AcHobo -8 106 3 4 1220 221 222 50 10 chr17 83289009 83289109 -11983542 + (TA)n Simple_repeat Simple_repeat 1 104 0 4 1220 599 304 35 28 chr17 83289255 83289509 -11983142 + L1ME4a LINE L1 5621 5876 -248 4 1220 266 244 50 50 chr17 83291043 83291164 -11981487 + L1MA6 LINE L1 6175 6295 -5 4 1220 385 290 65 0 chr17 83291639 83291777 -11980874 + Lx9 LINE L1 7313 7459 -185 4 1220 32891 89 19 3 chr17 83291817 83297119 -11975532 + L1Md_F2 LINE L1 211 5586 -297 4 1220 7196 107 15 7 chr17 83297119 83298107 -11974544 + L1Md_F2 LINE L1 5587 6582 0 4 1220 450 234 8 15 chr17 83298133 83298263 -11974388 + Lx9 LINE L1 7516 7644 0 4 1220 359 207 0 0 chr17 83298320 83298378 -11974273 + B3A SINE B2 20 77 -121 4 1220 273 240 0 0 chr17 83298382 83298457 -11974194 + GA-rich Low_complexity Low_complexity 2 76 0 4 1220 391 227 32 32 chr17 83298799 83298922 -11973729 + Lx9 LINE L1 5253 5375 -472 4 1220 1835 252 73 17 chr17 83299196 83299883 -11972768 + Lx9 LINE L1 5395 6159 -1314 4 1220 1258 234 121 22 chr17 83299986 83300432 -11972219 + Lx9 LINE L1 7154 7643 -1 4 1220 370 351 88 108 chr17 83302915 83303266 -11969385 + MLT1I LTR MaLR 64 407 -4 4 1220 307 323 58 6 chr17 83303291 83303447 -11969204 - MIRc SINE MIR -59 209 46 4 1220 438 298 73 73 chr17 83303911 83304186 -11968465 + B4A SINE B4 3 277 -15 4 1220 371 311 211 11 chr17 83305582 83305767 -11966884 + ID_B1 SINE B4 3 224 0 4 1220 5569 83 17 7 chr17 83305832 83306549 -11966102 - L1Md_F2 LINE L1 -12 6570 5847 4 1220 11209 77 50 2 chr17 83306549 83307925 -11964726 - L1_Mm LINE L1 -609 5274 3861 4 1220 441 0 0 0 chr17 83307925 83307974 -11964677 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 1220 11209 77 50 2 chr17 83307974 83308139 -11964512 - L1_Mm LINE L1 -2023 3860 3659 4 1220 353 286 134 0 chr17 83308191 83308303 -11964348 + ID_B1 SINE B4 82 208 -16 4 1220 1130 0 8 0 chr17 83308304 83308434 -11964217 + (GAAAA)n Simple_repeat Simple_repeat 4 134 0 4 1220 203 125 0 24 chr17 83309626 83309647 -11963004 + (CATA)n Simple_repeat Simple_repeat 1 21 0 4 1220 306 0 0 0 chr17 83309647 83309681 -11962970 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 1220 203 125 0 24 chr17 83309681 83309700 -11962951 + (CATA)n Simple_repeat Simple_repeat 2 20 0 4 1220 2375 115 16 0 chr17 83309936 83310258 -11962393 - ORR1A2 LTR MaLR 0 327 1 4 1220 276 310 59 35 chr17 83310280 83310465 -11962186 + MLT1B LTR MaLR 189 374 0 4 1220 209 362 29 80 chr17 83310573 83310711 -11961940 + L3 LINE CR1 3956 4086 -403 4 1220 16626 102 18 9 chr17 83311171 83314198 -11958453 + L1VL4 LINE L1 223 3278 -281 4 1220 4052 104 2 11 chr17 83314237 83314781 -11957870 + L1_Mus4 LINE L1 6098 6636 0 4 1220 273 356 59 0 chr17 83314898 83315016 -11957635 - MLT1D LTR MaLR -4 501 377 4 1220 255 310 45 11 chr17 83315371 83315459 -11957192 + L3 LINE CR1 4156 4246 -243 4 1220 217 318 70 12 chr17 83316123 83316209 -11956442 - L2b LINE L2 -5 3370 3280 4 1220 780 313 50 14 chr17 83316231 83316513 -11956138 + B4A SINE B4 1 292 0 4 1220 624 54 0 0 chr17 83316654 83316728 -11955923 + L1Md_F2 LINE L1 5513 5586 -297 4 1220 8677 46 1 0 chr17 83316728 83317711 -11954940 + L1Md_F2 LINE L1 5587 6570 -12 4 1220 508 212 10 10 chr17 83317963 83318063 -11954588 + PB1D10 SINE Alu 13 112 -5 4 1220 1054 129 106 145 chr17 83318084 83318209 -11954442 + URR1A DNA MER1_type 1 132 -94 4 1220 1294 28 7 0 chr17 83318209 83318354 -11954297 - B1_Mm SINE Alu 0 147 2 4 1220 1054 129 106 145 chr17 83318354 83318463 -11954188 + URR1A DNA MER1_type 133 226 0 4 1220 584 290 67 84 chr17 83318658 83319004 -11953647 - L1M5 LINE L1 -532 5641 5302 4 1220 869 297 84 11 chr17 83319240 83319502 -11953149 - B4 SINE B4 -2 290 10 4 1220 312 294 63 0 chr17 83320017 83320143 -11952508 - Lx7 LINE L1 -363 7333 7200 4 1220 231 88 0 0 chr17 83320193 83320227 -11952424 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 4 1220 4103 224 24 28 chr17 83320231 83321116 -11951535 - Lx6 LINE L1 -169 7291 6411 4 1220 4836 60 11 0 chr17 83321311 83321876 -11950775 - L1_Mus2 LINE L1 0 6566 5996 4 1220 511 268 47 8 chr17 83322457 83322585 -11950066 - ETnERV2-int LTR ERVK -204 7202 7070 4 1220 540 291 187 75 chr17 83322629 83323216 -11949435 + L1MC3 LINE L1 5749 6401 -1384 4 1220 1964 181 34 11 chr17 83323220 83323578 -11949073 - ORR1D1 LTR MaLR -8 366 1 4 1220 1167 278 124 38 chr17 83323578 83324135 -11948516 + L1MC3 LINE L1 6397 7001 -784 4 1220 576 53 0 0 chr17 83324219 83324295 -11948356 + (TC)n Simple_repeat Simple_repeat 2 77 0 4 1220 486 0 0 0 chr17 83324295 83324349 -11948302 + (TTC)n Simple_repeat Simple_repeat 3 56 0 4 1220 243 312 171 5 chr17 83324351 83324573 -11948078 + L1MC3 LINE L1 7107 7365 -420 4 1220 795 242 93 37 chr17 83324753 83325053 -11947598 + L1MC3 LINE L1 7438 7754 -31 4 1220 315 313 0 0 chr17 83325085 83325168 -11947483 - BC1_Mm scRNA scRNA -68 84 2 4 1220 308 368 128 18 chr17 83325646 83325928 -11946723 - MLT1K LTR MaLR -2 593 281 4 1220 376 19 38 0 chr17 83326058 83326111 -11946540 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1220 375 300 31 102 chr17 83326261 83326517 -11946134 - Tigger10 DNA Tigger -257 1586 1349 4 1220 180 246 43 58 chr17 83328137 83328206 -11944445 - MIRb SINE MIR -58 210 143 4 1220 215 174 0 21 chr17 83328206 83328253 -11944398 + (TTA)n Simple_repeat Simple_repeat 3 48 0 4 1220 222 341 11 0 chr17 83328253 83328341 -11944310 - MIR SINE MIR -101 161 73 4 1220 351 0 0 0 chr17 83329269 83329308 -11943343 + (T)n Simple_repeat Simple_repeat 1 39 0 4 1220 880 326 205 27 chr17 83329867 83331055 -11941596 - L2 LINE L2 -585 2834 1435 4 1220 531 0 0 0 chr17 83331221 83331280 -11941371 + (CA)n Simple_repeat Simple_repeat 1 59 0 4 1220 353 269 48 9 chr17 83332514 83332619 -11940032 - MLT1E1A LTR MaLR -12 668 560 4 1220 473 227 0 9 chr17 83332668 83332779 -11939872 + BC1_Mm scRNA scRNA 1 110 -42 4 1220 288 373 67 63 chr17 83332786 83333009 -11939642 - MLT1E1A LTR MaLR -169 391 168 4 1220 731 161 7 0 chr17 83333012 83333149 -11939502 + CT-rich Low_complexity Low_complexity 1 138 0 4 1220 279 0 0 0 chr17 83333606 83333637 -11939014 + (TAGTG)n Simple_repeat Simple_repeat 2 32 0 4 1220 695 98 16 8 chr17 83333664 83333787 -11938864 - L1_Mus3 LINE L1 -4 6634 6511 4 1220 278 324 19 19 chr17 83333817 83333921 -11938730 - B4A SINE B4 -160 132 29 4 1220 7560 107 18 4 chr17 83334187 83335633 -11937018 + Lx LINE L1 5192 6649 -5 4 1220 783 159 108 133 chr17 83336790 83336993 -11935658 + URR1A DNA MER1_type 1 198 -28 4 1220 450 0 0 0 chr17 83337791 83337841 -11934810 + (TC)n Simple_repeat Simple_repeat 1 50 0 4 1220 354 23 0 0 chr17 83337841 83337883 -11934768 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1220 2253 71 44 16 chr17 83338040 83338355 -11934296 - L1Md_F2 LINE L1 -47 6535 6212 4 1220 582 294 21 53 chr17 83339409 83339599 -11933052 + B4 SINE B4 22 205 -87 4 1220 318 336 16 32 chr17 83339820 83339943 -11932708 + B4 SINE B4 166 286 -6 4 1220 345 24 0 0 chr17 83339996 83340038 -11932613 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1220 22 0 0 0 chr17 83340284 83340306 -11932345 + AT_rich Low_complexity Low_complexity 1 22 0 4 1220 25 0 0 0 chr17 83340370 83340395 -11932256 + AT_rich Low_complexity Low_complexity 1 25 0 4 1220 246 193 0 56 chr17 83340465 83340519 -11932132 + MIR SINE MIR 119 169 -99 4 1220 3553 22 0 24 chr17 83340533 83340959 -11931692 - L1Md_F2 LINE L1 0 6582 6167 4 1220 486 322 14 32 chr17 83340966 83341187 -11931464 - MER20 DNA MER1_type -2 217 1 4 1220 432 301 121 10 chr17 83342428 83342626 -11930025 + MER58A DNA MER1_type 4 223 -1 4 1220 1043 123 0 12 chr17 83342750 83342923 -11929728 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 4 1220 1784 240 125 13 chr17 83342927 83343479 -11929172 + Lx7 LINE L1 6825 7438 -258 4 1220 234 174 140 11 chr17 83343468 83343561 -11929090 + Lx7 LINE L1 7592 7696 0 4 1220 1568 232 29 48 chr17 83344347 83344536 -11928115 - MTD LTR MaLR 0 419 233 4 1220 2381 88 25 0 chr17 83344536 83344855 -11927796 - ORR1A2 LTR MaLR 0 327 1 4 1220 1568 232 29 48 chr17 83344855 83345081 -11927570 - MTD LTR MaLR -187 232 12 4 1220 441 54 0 0 chr17 83345197 83345253 -11927398 + (CAGAGA)n Simple_repeat Simple_repeat 5 60 0 4 1220 439 269 53 8 chr17 83345736 83345867 -11926784 + MER5A DNA MER1_type 16 152 -37 4 1220 450 229 127 0 chr17 83346013 83346131 -11926520 + B4 SINE B4 1 133 -159 4 1220 242 373 0 0 chr17 83346371 83346438 -11926213 + B4 SINE B4 224 290 -2 4 1220 660 26 0 0 chr17 83346470 83346548 -11926103 + (GA)n Simple_repeat Simple_repeat 2 79 0 4 1220 186 103 0 0 chr17 83346987 83347016 -11925635 + (TAA)n Simple_repeat Simple_repeat 3 31 0 4 1220 192 283 140 10 chr17 83347616 83347716 -11924935 - MIR SINE MIR -40 222 110 4 1220 3046 20 0 25 chr17 83348106 83348461 -11924190 - ORR1A0 LTR MaLR 0 346 1 4 1220 1176 95 0 0 chr17 83348731 83348899 -11923752 + (GGAA)n Simple_repeat Simple_repeat 3 170 0 4 1220 540 0 0 0 chr17 83348905 83348965 -11923686 + (GGGA)n Simple_repeat Simple_repeat 2 61 0 4 1220 551 255 174 29 chr17 83349899 83350312 -11922339 - RMER5 LTR ERV1 -9 525 53 4 1220 366 23 0 0 chr17 83350587 83350630 -11922021 + (TTTC)n Simple_repeat Simple_repeat 3 45 0 5 1220 507 85 0 0 chr17 83350631 83350713 -11921938 + (CTTTG)n Simple_repeat Simple_repeat 2 83 0 5 1220 1165 43 0 0 chr17 83350713 83350851 -11921800 - B1_Mus1 SINE Alu -10 138 1 5 1220 1017 212 62 30 chr17 83351378 83351722 -11920929 + RLTR26 LTR ERVK 5 395 -247 5 1220 10886 22 0 3 chr17 83351722 83353217 -11919434 - L1Md_A LINE L1 -440 6142 4653 5 1220 3826 34 2 0 chr17 83353217 83353663 -11918988 + L1Md_T LINE L1 6136 6582 0 5 1220 305 254 171 47 chr17 83353673 83353884 -11918767 + RLTR26 LTR ERVK 377 613 -29 5 1220 387 0 0 0 chr17 83354423 83354466 -11918185 + (GA)n Simple_repeat Simple_repeat 1 43 0 5 1220 333 0 0 0 chr17 83354466 83354502 -11918149 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 1220 739 246 38 24 chr17 83354831 83355043 -11917608 + B3 SINE B2 1 215 -1 5 1220 998 82 59 0 chr17 83355866 83356001 -11916650 + B1_Mus1 SINE Alu 3 145 -3 5 1220 801 0 0 0 chr17 83356607 83356696 -11915955 + (TA)n Simple_repeat Simple_repeat 1 89 0 5 1220 258 32 0 0 chr17 83356801 83356832 -11915819 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 5 1220 1106 102 0 6 chr17 83357083 83357251 -11915400 + (GAA)n Simple_repeat Simple_repeat 1 167 0 5 1220 423 0 0 0 chr17 83357360 83357407 -11915244 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1220 347 266 71 12 chr17 83358320 83358490 -11914161 + L1M2 LINE L1 5401 5575 -725 5 1220 4723 75 31 9 chr17 83358964 83359599 -11913052 + L1Md_F2 LINE L1 5934 6582 0 5 1220 283 316 153 48 chr17 83359802 83360051 -11912600 + LTR33 LTR ERVL 235 509 -6 5 1220 369 0 0 0 chr17 83360131 83360172 -11912479 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1220 232 229 323 0 chr17 83360297 83360393 -11912258 + B4A SINE B4 164 290 -2 5 1220 631 267 101 7 chr17 83360408 83360495 -11912156 + L1M3 LINE L1 5050 5154 -986 5 1220 234 0 0 0 chr17 83360495 83360521 -11912130 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 5 1220 900 243 126 16 chr17 83360521 83360934 -11911717 + L1M3 LINE L1 5155 5615 -574 5 1220 719 163 44 0 chr17 83361067 83361202 -11911449 - B1_Mur3 SINE Alu -6 143 3 5 1220 393 195 39 0 chr17 83361656 83361733 -11910918 + B3A SINE B2 1 80 -118 5 1220 254 341 33 0 chr17 83361733 83361747 -11910904 + RSINE1 SINE B4 2 95 -70 5 152 198 118 0 0 chr17 83361772 83361806 -11910845 + (GA)n Simple_repeat Simple_repeat 1 34 0 5 1221 505 277 75 23 chr17 83361813 83362186 -11910465 + L1M5 LINE L1 5116 5511 -653 5 1221 216 0 0 0 chr17 83362688 83362712 -11909939 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1221 5268 175 80 5 chr17 83363310 83364277 -11908374 - RMER1B Other Other -26 1040 2 5 1221 336 48 0 0 chr17 83364317 83364359 -11908292 + (TTG)n Simple_repeat Simple_repeat 3 44 0 5 1221 814 158 23 0 chr17 83364359 83364492 -11908159 - B1_Mur4 SINE Alu -14 136 1 5 1221 9572 140 5 3 chr17 83364497 83366811 -11905840 - Lx LINE L1 -3 6651 4334 5 1221 756 50 0 0 chr17 83366827 83366926 -11905725 - MusHAL1 LINE L1 -1759 953 855 5 1221 700 137 7 30 chr17 83366926 83366944 -11905707 + B1_Mus2 SINE Alu 23 50 -97 5 1221 243 217 0 91 chr17 83366944 83367010 -11905641 + 4.5SRNA scRNA scRNA 27 86 -8 5 1221 700 137 7 30 chr17 83367010 83367068 -11905583 + B1_Mus2 SINE Alu 51 147 0 5 1221 6349 65 3 33 chr17 83367078 83367845 -11904806 - L1VL4 LINE L1 -1886 1673 928 5 1221 749 50 0 0 chr17 83367845 83367946 -11904705 - L1_Mus2 LINE L1 -3 6563 6463 5 1221 6349 117 29 22 chr17 83367946 83368849 -11903802 - L1VL4 LINE L1 -5375 927 1 5 1221 310 152 0 24 chr17 83368863 83368930 -11903721 - L1_Mur1 LINE L1 -682 5609 5527 5 1221 344 304 29 14 chr17 83368927 83369067 -11903584 + L1MA4 LINE L1 5744 5885 -415 5 1221 29 28 0 0 chr17 83369098 83369134 -11903517 + AT_rich Low_complexity Low_complexity 1 36 0 5 1221 384 304 216 17 chr17 83369212 83369453 -11903198 + B4 SINE B4 3 291 -1 5 1221 447 19 0 0 chr17 83369500 83369552 -11903099 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1221 304 319 124 35 chr17 83370443 83370732 -11901919 - MLT1A0 LTR MaLR 0 408 50 5 1221 1094 128 5 21 chr17 83370749 83370940 -11901711 - Lx2 LINE L1 0 6997 6810 5 1221 1571 107 112 23 chr17 83370940 83371153 -11901498 + Lx2 LINE L1 6539 6748 -249 5 1221 630 0 0 0 chr17 83371153 83371223 -11901428 + (TC)n Simple_repeat Simple_repeat 2 71 0 5 1221 1571 107 112 23 chr17 83371223 83371268 -11901383 + Lx2 LINE L1 6749 6819 -178 5 1221 1049 109 66 39 chr17 83372283 83372465 -11900186 + B2_Mm2 SINE B2 4 190 -5 5 1221 21 0 0 0 chr17 83372843 83372864 -11899787 + AT_rich Low_complexity Low_complexity 1 21 0 5 1221 30 59 0 0 chr17 83373499 83373550 -11899101 + AT_rich Low_complexity Low_complexity 1 51 0 5 1221 516 185 63 16 chr17 83374499 83374625 -11898026 - RLTR13D3 LTR ERVK 0 1114 983 5 1221 289 325 73 39 chr17 83374987 83375221 -11897430 - RLTR3_Mm LTR ERVK -521 807 566 5 1221 38817 46 0 3 chr17 83375221 83381884 -11890767 - L1Md_T LINE L1 -9 6576 1 5 1221 303 200 27 99 chr17 83382217 83382328 -11890323 - RLTR13D3 LTR ERVK -1011 103 1 5 1221 1976 133 47 0 chr17 83382861 83383161 -11889490 + L1VL4 LINE L1 20 333 -5969 5 1221 1454 76 75 9 chr17 83383135 83383348 -11889303 + MusHAL1 LINE L1 2340 2566 -146 5 1221 286 276 51 13 chr17 83383352 83383468 -11889183 + L1_Rod LINE L1 5532 5699 -481 5 1221 317 262 48 0 chr17 83383760 83383776 -11888875 - PB1D9 SINE Alu -21 99 12 5 1221 437 147 0 0 chr17 83383776 83383844 -11888807 - ID_B1 SINE B4 -64 160 93 5 1221 2340 162 52 0 chr17 83383844 83384244 -11888407 - MTC LTR MaLR 0 421 1 5 1221 566 128 34 0 chr17 83384247 83384364 -11888287 - MTC-int LTR MaLR 0 1258 1138 5 1221 2638 212 81 64 chr17 83384377 83384523 -11888128 - MTC-int LTR MaLR -211 887 733 5 1221 657 0 0 0 chr17 83384523 83384596 -11888055 + (GA)n Simple_repeat Simple_repeat 2 74 0 5 1221 3168 153 40 54 chr17 83384596 83385316 -11887335 - MTC-int LTR MaLR -366 732 2 5 1221 2293 135 50 8 chr17 83385316 83385707 -11886944 - MTC LTR MaLR -18 403 14 5 1221 277 287 58 0 chr17 83385713 83385800 -11886851 - ID_B1 SINE B4 -128 96 5 5 1221 1049 259 17 51 chr17 83385892 83386185 -11886466 + B4A SINE B4 10 292 0 5 1221 756 190 0 0 chr17 83386270 83386428 -11886223 + (CA)n Simple_repeat Simple_repeat 1 158 0 5 1221 205 242 0 21 chr17 83386455 83386548 -11886103 + (CA)n Simple_repeat Simple_repeat 1 91 0 5 1221 768 293 30 0 chr17 83387684 83387960 -11884691 - L1MC2 LINE L1 -322 6011 5726 5 1221 9134 9 0 0 chr17 83388198 83389474 -11883177 - L1Md_T LINE L1 -1 6581 5306 5 1221 12648 23 0 0 chr17 83389474 83390937 -11881714 + L1Md_T LINE L1 3848 5310 -573 5 1221 1133 163 77 4 chr17 83390943 83391177 -11881474 - Lx4A LINE L1 0 7058 6808 5 1221 553 290 194 13 chr17 83391196 83391741 -11880910 - L1MC2 LINE L1 -974 5172 4528 5 1221 7145 204 22 50 chr17 83391851 83394027 -11878624 + Lx5 LINE L1 4528 6636 -414 5 1221 426 194 222 10 chr17 83394064 83394163 -11878488 - B3A SINE B2 -78 120 1 5 1221 276 53 0 0 chr17 83394197 83394235 -11878416 + (T)n Simple_repeat Simple_repeat 1 38 0 5 1221 420 314 87 36 chr17 83394242 83394437 -11878214 + L1MC4 LINE L1 1675 1879 -4336 5 1221 209 159 0 22 chr17 83394441 83394486 -11878165 + T-rich Low_complexity Low_complexity 2 45 0 5 1221 329 286 226 26 chr17 83394626 83394852 -11877799 + B4A SINE B4 3 273 -19 5 1221 770 304 82 39 chr17 83395030 83395420 -11877231 + MLT1F-int LTR MaLR 126 532 -957 5 1221 350 247 47 0 chr17 83395408 83395493 -11877158 + RSINE1 SINE B4 16 104 -61 5 1221 417 90 0 0 chr17 83395494 83395561 -11877090 + (CA)n Simple_repeat Simple_repeat 2 68 0 5 1221 1199 352 41 18 chr17 83395567 83396082 -11876569 + MLT1F-int LTR MaLR 552 1078 -411 5 1221 1102 59 15 0 chr17 83396656 83396791 -11875860 - B1_Mus2 SINE Alu -10 137 1 5 1221 962 194 112 30 chr17 83398173 83398370 -11874281 - URR1B DNA MER1_type -12 213 1 5 1221 206 263 0 0 chr17 83398482 83398520 -11874131 + MER5A DNA MER1_type 117 154 -35 5 1221 928 140 12 6 chr17 83398645 83398817 -11873834 + GA-rich Low_complexity Low_complexity 3 175 0 5 1221 242 314 140 25 chr17 83399070 83399227 -11873424 - L2c LINE L2 -229 3158 2981 5 1221 576 0 0 0 chr17 83399988 83400052 -11872599 + (GA)n Simple_repeat Simple_repeat 2 65 0 5 1221 1112 95 6 6 chr17 83400757 83400916 -11871735 + B2_Mm1a SINE B2 2 160 -33 5 1221 441 0 0 0 chr17 83400916 83400965 -11871686 + (TAAA)n Simple_repeat Simple_repeat 3 51 0 5 1221 28 29 0 0 chr17 83401444 83401479 -11871172 + AT_rich Low_complexity Low_complexity 1 35 0 5 1221 410 331 66 11 chr17 83401834 83402017 -11870634 - MER20B DNA MER1_type -229 554 362 5 1221 1080 236 99 41 chr17 83402021 83402297 -11870354 + B4A SINE B4 2 292 0 5 1221 332 167 14 0 chr17 83402305 83402377 -11870274 + (CA)n Simple_repeat Simple_repeat 1 73 0 5 1221 1885 228 191 31 chr17 83402383 83403095 -11869556 - RMER13A LTR ERVK -21 839 14 5 1221 812 118 7 0 chr17 83403104 83403240 -11869411 + (GA)n Simple_repeat Simple_repeat 1 137 0 5 1221 239 220 0 20 chr17 83403241 83403292 -11869359 - MER20B DNA MER1_type -416 367 318 5 1221 455 270 196 38 chr17 83403403 83403682 -11868969 + L1MDa LINE L1 62 385 -6248 5 1221 231 114 0 0 chr17 83403682 83403717 -11868934 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1221 455 270 196 38 chr17 83403717 83403810 -11868841 + L1MDa LINE L1 386 493 -6140 5 1221 931 273 43 26 chr17 83403818 83404168 -11868483 + L1MDa LINE L1 1667 2022 -4611 5 1221 992 198 42 33 chr17 83404196 83404410 -11868241 + B3 SINE B2 1 216 0 5 1221 2342 90 16 3 chr17 83404421 83404743 -11867908 - ORR1A3 LTR MaLR 0 326 1 5 1221 1553 264 89 34 chr17 83404753 83405380 -11867271 + Lx9 LINE L1 6961 7622 -22 5 1221 201 147 0 0 chr17 83405400 83405434 -11867217 + (GGA)n Simple_repeat Simple_repeat 3 36 0 5 1221 1191 96 0 0 chr17 83405427 83405482 -11867169 + (GAA)n Simple_repeat Simple_repeat 2 56 0 5 1221 1518 22 0 0 chr17 83405482 83405660 -11866991 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 5 1221 1191 96 0 0 chr17 83405660 83405782 -11866869 + (GAA)n Simple_repeat Simple_repeat 3 124 0 5 1221 458 310 63 15 chr17 83405791 83405997 -11866654 + L1MDa LINE L1 2063 2278 -4355 5 1221 570 98 0 0 chr17 83406315 83406397 -11866254 + (CA)n Simple_repeat Simple_repeat 2 83 0 5 1221 245 244 0 0 chr17 83406800 83406845 -11865806 - MLT1C LTR MaLR -73 394 350 5 1221 490 343 125 47 chr17 83407307 83407882 -11864769 - L2 LINE L2 -693 2726 2107 5 1221 368 351 6 72 chr17 83408423 83408604 -11864047 + B3 SINE B2 2 170 -46 5 1221 1002 244 197 6 chr17 83408864 83409182 -11863469 + MTE2b LTR MaLR 1 379 0 5 1221 1177 51 0 0 chr17 83409397 83409535 -11863116 - B1_Mus1 SINE Alu -10 138 1 6 1221 647 239 352 94 chr17 83409786 83410073 -11862578 - MTEa LTR MaLR -3 376 16 6 1221 243 307 48 29 chr17 83410428 83410532 -11862119 + MER5A DNA MER1_type 1 106 -83 6 1221 22 0 0 0 chr17 83410778 83410800 -11861851 + AT_rich Low_complexity Low_complexity 1 22 0 6 1221 298 258 0 82 chr17 83411337 83411447 -11861204 - L1MA10 LINE L1 -45 6289 6189 6 1221 352 256 66 82 chr17 83411475 83411658 -11860993 - L1ME1 LINE L1 -113 6066 5887 6 1221 788 216 0 33 chr17 83411696 83411712 -11860939 - B1_Mur2 SINE Alu 0 149 137 6 1221 456 19 0 0 chr17 83411712 83411765 -11860886 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1221 788 216 0 33 chr17 83411765 83411901 -11860750 - B1_Mur2 SINE Alu -13 136 2 6 1221 261 209 0 0 chr17 83411904 83411970 -11860681 - L1ME1 LINE L1 -372 5870 5805 6 1221 462 101 0 0 chr17 83412096 83412165 -11860486 + (CA)n Simple_repeat Simple_repeat 1 69 0 6 1221 408 200 0 0 chr17 83413575 83413670 -11858981 + (TG)n Simple_repeat Simple_repeat 2 96 0 6 1221 324 0 0 0 chr17 83413670 83413706 -11858945 + (GA)n Simple_repeat Simple_repeat 1 36 0 6 1221 187 255 0 60 chr17 83413828 83413878 -11858773 + MIR SINE MIR 133 179 -83 6 1221 438 139 0 0 chr17 83414279 83414351 -11858300 + (CTG)n Simple_repeat Simple_repeat 1 72 0 6 1221 1353 66 55 0 chr17 83414734 83414756 -11857895 - B2_Mm1t SINE B2 0 193 162 6 1221 330 26 0 0 chr17 83414756 83414795 -11857856 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 6 1221 1353 66 55 0 chr17 83414795 83414955 -11857696 - B2_Mm1t SINE B2 -32 161 2 6 1221 344 267 54 22 chr17 83414955 83415047 -11857604 - RSINE1 SINE B4 -63 102 8 6 1221 586 308 124 65 chr17 83416311 83416682 -11855969 + MLT1A1 LTR MaLR 4 396 -12 6 1221 1199 126 121 0 chr17 83417289 83417488 -11855163 + URR1A DNA MER1_type 3 225 -1 6 1221 358 333 33 76 chr17 83417497 83417799 -11854852 + ORR1E LTR MaLR 22 310 -49 6 1221 780 216 20 0 chr17 83418048 83418201 -11854450 + RSINE1 SINE B4 2 157 -8 6 1221 233 296 0 22 chr17 83418291 83418381 -11854270 + (TATG)n Simple_repeat Simple_repeat 4 91 0 6 1221 261 128 0 0 chr17 83418392 83418439 -11854212 + (TG)n Simple_repeat Simple_repeat 1 47 0 6 1221 379 268 128 31 chr17 83419314 83419510 -11853141 + MLT1J LTR MaLR 40 254 -258 6 1221 244 306 167 48 chr17 83419527 83419695 -11852956 + MLT1J LTR MaLR 309 496 -16 6 1221 522 354 0 6 chr17 83420282 83420441 -11852210 - MER5A DNA MER1_type -27 162 5 6 1221 371 313 53 80 chr17 83420998 83421297 -11851354 + MER106B DNA MER1_type 767 1057 -2 6 1221 1031 318 91 20 chr17 83421703 83422685 -11849966 - L1MA5 LINE L1 -356 5944 4814 6 1221 1076 170 150 117 chr17 83422784 83423144 -11849507 - ORR1C1 LTR MaLR -6 372 1 6 1221 483 242 75 0 chr17 83423572 83423692 -11848959 - B1F SINE Alu -10 139 11 6 1221 510 294 115 68 chr17 83423697 83424194 -11848457 + L1MC4 LINE L1 7446 7965 -77 6 1221 489 240 139 29 chr17 83424486 83424658 -11847993 - B3A SINE B2 -6 192 2 6 1221 228 234 172 0 chr17 83424660 83424724 -11847927 - MER5A DNA MER1_type -114 75 1 6 1221 184 375 94 19 chr17 83425201 83425307 -11847344 - MIR SINE MIR -62 146 33 6 1221 486 0 0 0 chr17 83426355 83426409 -11846242 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 1221 4193 194 6 35 chr17 83426409 83427209 -11845442 - Lx7 LINE L1 -805 6891 6115 6 1221 221 80 0 74 chr17 83427840 83427894 -11844757 + (GCCTG)n Simple_repeat Simple_repeat 2 51 0 6 1221 210 266 15 15 chr17 83428362 83428427 -11844224 + MER5B DNA MER1_type 20 84 -94 6 1221 290 246 15 0 chr17 83428443 83428508 -11844143 + ID4_ SINE ID 9 74 -9 6 1221 246 256 49 37 chr17 83428508 83428524 -11844127 + ID_B1 SINE B4 9 90 -134 6 1221 304 130 130 0 chr17 83428547 83428601 -11844050 - MER5B DNA MER1_type -109 69 9 6 1221 807 231 93 36 chr17 83428763 83429042 -11843609 - Zaphod DNA Tip100 -48 3983 3689 6 1221 373 335 168 18 chr17 83429077 83429244 -11843407 + B4A SINE B4 33 224 -68 6 1221 619 257 4 114 chr17 83429247 83429475 -11843176 + B3 SINE B2 1 203 -13 6 1221 715 187 6 6 chr17 83429492 83429669 -11842982 + (CA)n Simple_repeat Simple_repeat 2 178 0 6 1221 229 264 122 27 chr17 83429678 83429752 -11842899 + B4A SINE B4 212 292 0 6 1221 324 0 0 0 chr17 83429764 83429800 -11842851 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1221 860 272 52 49 chr17 83429812 83430098 -11842553 + B4A SINE B4 2 288 -4 6 1221 213 320 0 0 chr17 83430102 83430177 -11842474 + (CATA)n Simple_repeat Simple_repeat 1 75 0 6 1221 655 326 66 70 chr17 83430207 83430549 -11842102 - Zaphod DNA Tip100 -460 3571 3228 6 1221 1018 100 0 14 chr17 83430549 83430691 -11841960 + B1_Mus2 SINE Alu 2 141 -6 6 1221 655 326 66 70 chr17 83430691 83430836 -11841815 - Zaphod DNA Tip100 -804 3227 3086 6 1221 1970 97 72 16 chr17 83431480 83431784 -11840867 - ORR1A4 LTR MaLR -8 321 1 6 1221 380 259 0 0 chr17 83431785 83431866 -11840785 - PB1D10 SINE Alu -35 82 2 6 1221 851 321 138 96 chr17 83431876 83432129 -11840522 - Zaphod DNA Tip100 -1107 2924 2637 6 1221 708 252 13 0 chr17 83432129 83432284 -11840367 + RSINE1 SINE B4 1 157 -8 6 1221 851 321 138 96 chr17 83432284 83432909 -11839742 - Zaphod DNA Tip100 -1395 2636 2009 6 1221 297 139 0 0 chr17 83433280 83433323 -11839328 - B1_Mur2 SINE Alu -55 94 52 6 1221 279 294 61 45 chr17 83433362 83433494 -11839157 - B1F1 SINE Alu -4 145 12 6 1221 263 331 19 62 chr17 83433363 83433524 -11839127 - ID_B1 SINE B4 -4 220 67 6 1221 1380 62 0 27 chr17 83433900 83434083 -11838568 + B2_Mm1t SINE B2 2 179 -14 6 1221 25 31 0 0 chr17 83434113 83434145 -11838506 + AT_rich Low_complexity Low_complexity 1 32 0 6 1221 485 204 11 11 chr17 83434303 83434397 -11838254 - B1_Mur2 SINE Alu -55 94 1 6 1221 273 305 47 19 chr17 83434304 83434411 -11838240 - B4 SINE B4 -114 178 69 6 1221 551 313 111 45 chr17 83434552 83435351 -11837300 - Zaphod DNA Tip100 -2255 1776 811 6 1221 263 177 226 60 chr17 83435704 83435788 -11836863 + PB1D10 SINE Alu 2 99 -18 6 1221 994 288 62 25 chr17 83435788 83436141 -11836510 + RLTR14 LTR ERV1 15 380 -2 6 1221 889 296 116 3 chr17 83436347 83436682 -11835969 + MTEb LTR MaLR 7 379 0 6 1221 3662 158 97 29 chr17 83437214 83437904 -11834747 + RMER19A LTR ERVK 1 737 0 6 1221 228 289 152 22 chr17 83437931 83438023 -11834628 + MIRm SINE MIR 81 184 -92 6 1221 3182 9 0 6 chr17 83438510 83438858 -11833793 + ORR1A0 LTR MaLR 1 346 0 6 1221 180 269 53 11 chr17 83439680 83439774 -11832877 - L3 LINE CR1 -2489 2000 1903 6 1221 1566 200 30 35 chr17 83440040 83440413 -11832238 + ORR1D1 LTR MaLR 2 372 -2 6 1221 550 115 16 16 chr17 83440747 83440871 -11831780 + (TCTCTG)n Simple_repeat Simple_repeat 3 126 0 6 1221 21 36 0 0 chr17 83441063 83441091 -11831560 + GC_rich Low_complexity Low_complexity 1 28 0 6 1221 1144 196 14 5 chr17 83441571 83441781 -11830870 + B3 SINE B2 2 213 -3 6 1221 1083 149 0 0 chr17 83442347 83442763 -11829888 + (CA)n Simple_repeat Simple_repeat 1 416 0 6 1221 2076 151 5 76 chr17 83444795 83445176 -11827475 - ORR1B1 LTR MaLR 0 394 41 6 1221 214 361 0 0 chr17 83445948 83446009 -11826642 + RSINE1 SINE B4 2 62 -103 6 1221 390 40 0 0 chr17 83446444 83446450 -11826201 + (GAA)n Simple_repeat Simple_repeat 1 6 0 6 1221 1056 103 11 6 chr17 83446450 83446625 -11826026 + (GGA)n Simple_repeat Simple_repeat 3 178 0 6 1221 390 40 0 0 chr17 83446625 83446668 -11825983 + (GAA)n Simple_repeat Simple_repeat 1 43 0 6 1221 288 200 0 0 chr17 83446675 83446740 -11825911 + (TGG)n Simple_repeat Simple_repeat 3 67 0 6 1221 1194 48 0 20 chr17 83446972 83447122 -11825529 + B1_Mus2 SINE Alu 1 147 0 6 1221 198 0 0 0 chr17 83447122 83447144 -11825507 + (A)n Simple_repeat Simple_repeat 1 22 0 6 1221 289 228 12 81 chr17 83447440 83447526 -11825125 - L2b LINE L2 0 3426 3308 6 1221 233 326 39 39 chr17 83447633 83447735 -11824916 - MIRm SINE MIR -89 187 86 6 1221 416 253 542 7 chr17 83448639 83448781 -11823870 + ID_B1 SINE B4 3 220 -4 6 1221 485 290 201 8 chr17 83448889 83449153 -11823498 + MER58B DNA MER1_type 27 341 0 6 1221 284 269 0 37 chr17 83449328 83449409 -11823242 - ID4 SINE ID -2 81 4 6 1221 198 0 0 0 chr17 83449881 83449903 -11822748 + (A)n Simple_repeat Simple_repeat 1 22 0 6 1221 226 0 29 29 chr17 83450509 83450544 -11822107 + (CCA)n Simple_repeat Simple_repeat 2 36 0 6 1221 210 192 0 0 chr17 83450579 83450631 -11822020 + GA-rich Low_complexity Low_complexity 1 52 0 6 1221 261 0 0 0 chr17 83451632 83451661 -11820990 + (CAA)n Simple_repeat Simple_repeat 2 30 0 6 1221 345 289 97 21 chr17 83452175 83452320 -11820331 - L3b LINE CR1 -304 178 23 6 1221 928 274 23 64 chr17 83452832 83453097 -11819554 + B4A SINE B4 37 290 -2 6 1221 246 176 0 0 chr17 83453128 83453179 -11819472 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1221 2674 105 8 5 chr17 83453188 83453562 -11819089 + ORR1C1 LTR MaLR 1 375 -3 6 1221 396 0 0 0 chr17 83453562 83453606 -11819045 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1221 1755 214 30 71 chr17 83453703 83454175 -11818476 + RMER19C LTR ERVK 152 611 0 6 1221 223 191 24 0 chr17 83454378 83454420 -11818231 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 6 1221 484 220 73 0 chr17 83454501 83454610 -11818041 + PB1D10 SINE Alu 1 117 0 6 1221 499 279 226 32 chr17 83454666 83454918 -11817733 - RMER15 LTR ERVL 0 575 275 6 1221 234 222 0 39 chr17 83455174 83455277 -11817374 + GA-rich Low_complexity Low_complexity 1 99 0 6 1221 228 316 13 0 chr17 83455483 83455562 -11817089 + MER53 DNA hAT 16 95 -98 6 1221 848 103 23 0 chr17 83456165 83456339 -11816312 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 6 1221 289 341 12 0 chr17 83456352 83456437 -11816214 - B1F SINE Alu -56 93 8 6 1221 311 291 42 112 chr17 83456560 83456703 -11815948 - MER58B DNA MER1_type -40 301 169 6 1221 1871 91 4 4 chr17 83456730 83456985 -11815666 - MTB LTR MaLR -143 257 3 6 1221 1165 35 28 0 chr17 83457806 83457949 -11814702 + B1_Mus1 SINE Alu 2 148 0 7 1221 222 336 90 55 chr17 83458149 83458294 -11814357 + MIRb SINE MIR 46 195 -73 7 1221 665 247 20 87 chr17 83458868 83459063 -11813588 + B3A SINE B2 1 182 -16 7 1221 25 51 0 0 chr17 83459080 83459119 -11813532 + AT_rich Low_complexity Low_complexity 1 39 0 7 1221 508 284 106 6 chr17 83459805 83459975 -11812676 + MER20 DNA MER1_type 31 217 -2 7 1221 769 125 39 4 chr17 83460381 83460665 -11811986 + (TG)n Simple_repeat Simple_repeat 1 294 0 7 1221 522 175 17 17 chr17 83460700 83460880 -11811771 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1221 500 258 113 8 chr17 83461160 83461293 -11811358 + B1F SINE Alu 3 149 0 7 1221 289 279 34 23 chr17 83461305 83461391 -11811260 + B4A SINE B4 11 97 -195 7 1221 1681 174 261 42 chr17 83461391 83461847 -11810804 + MT2B LTR ERVL 1 556 -45 7 1221 1079 74 23 0 chr17 83461850 83462026 -11810625 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 7 1221 180 111 0 0 chr17 83462041 83462068 -11810583 + (TGGA)n Simple_repeat Simple_repeat 1 27 0 7 1221 1048 85 17 22 chr17 83462091 83462272 -11810379 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 7 1221 508 176 37 0 chr17 83462283 83462419 -11810232 + (TGGA)n Simple_repeat Simple_repeat 4 144 0 7 1221 728 145 23 6 chr17 83462393 83462566 -11810085 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 7 1221 1212 62 6 11 chr17 83462579 83462760 -11809891 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 7 1221 1105 94 26 12 chr17 83462781 83463212 -11809439 + (TAGA)n Simple_repeat Simple_repeat 1 437 0 7 1221 289 106 43 0 chr17 83463212 83463259 -11809392 + MT2B LTR ERVL 553 601 0 7 1221 400 253 0 22 chr17 83463372 83463461 -11809190 + RSINE1 SINE B4 79 165 0 7 1221 274 268 0 0 chr17 83463548 83463604 -11809047 + ID4 SINE ID 19 74 -9 7 1221 446 312 53 66 chr17 83463648 83463672 -11808979 + RSINE1 SINE B4 3 26 -139 7 1221 2124 80 28 16 chr17 83463672 83463990 -11808661 - RLTRETN_Mm LTR ERVK 0 322 1 7 1221 446 312 53 66 chr17 83463990 83464116 -11808535 + RSINE1 SINE B4 27 151 -14 7 1221 261 0 0 0 chr17 83464119 83464148 -11808503 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 1221 600 23 23 11 chr17 83464148 83464234 -11808417 + (GA)n Simple_repeat Simple_repeat 2 89 0 7 1221 416 271 24 179 chr17 83465030 83465237 -11807414 - ID_B1 SINE B4 -12 212 38 7 1221 384 226 118 36 chr17 83465551 83465661 -11806990 - RMER30 DNA MER1_type -29 173 55 7 1221 526 268 230 21 chr17 83465960 83466195 -11806456 - MLT2D LTR ERVL -126 288 5 7 1221 26 0 0 0 chr17 83466202 83466228 -11806423 + AT_rich Low_complexity Low_complexity 1 26 0 7 1221 238 267 17 0 chr17 83466383 83466443 -11806208 - MTEa LTR MaLR 0 379 319 7 1221 773 237 33 112 chr17 83466484 83466726 -11805925 - MTEa LTR MaLR -156 223 1 7 1221 350 284 149 45 chr17 83466988 83467209 -11805442 + L1MEg LINE L1 852 1095 -4989 7 1221 1266 259 78 10 chr17 83467248 83467544 -11805107 + MTEa LTR MaLR 64 379 0 7 1221 244 342 30 92 chr17 83468177 83468341 -11804310 + MLT1B LTR MaLR 199 352 -160 7 1221 270 342 19 64 chr17 83468447 83468603 -11804048 + MER21B LTR ERV1 204 352 -511 7 1221 381 43 0 0 chr17 83469975 83470022 -11802629 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 1221 592 221 80 10 chr17 83470028 83470180 -11802471 + MLT1B LTR MaLR 252 390 0 7 1221 705 304 116 23 chr17 83470362 83470665 -11801986 - MLT1G1 LTR MaLR -16 563 233 7 1221 254 294 41 131 chr17 83471134 83471279 -11801372 - MIRb SINE MIR -71 197 66 7 1221 403 242 89 32 chr17 83471408 83471532 -11801119 + MIR SINE MIR 128 258 -4 7 1221 264 253 80 0 chr17 83472107 83472182 -11800469 + ID4_ SINE ID 3 83 0 7 1221 630 273 114 9 chr17 83472202 83472409 -11800242 + B4A SINE B4 2 230 -62 7 1221 326 284 61 7 chr17 83472409 83472498 -11800153 + B3A SINE B2 2 95 -100 7 1221 533 181 8 0 chr17 83472600 83472733 -11799918 + (CA)n Simple_repeat Simple_repeat 1 134 0 7 1221 319 57 18 36 chr17 83473371 83473426 -11799225 + (TATATG)n Simple_repeat Simple_repeat 4 57 0 7 1221 1291 300 90 46 chr17 83474066 83474699 -11797952 + Charlie8 DNA MER1_type 590 1250 -1178 7 1221 2210 297 66 49 chr17 83474947 83475786 -11796865 + Charlie8 DNA MER1_type 1575 2427 -1 7 1221 363 248 0 99 chr17 83475808 83475847 -11796804 - BC1_Mm scRNA scRNA -43 109 1 7 1221 568 134 0 0 chr17 83475847 83475929 -11796722 - ID SINE ID -142 82 1 7 1221 486 356 12 18 chr17 83476105 83476271 -11796380 + Tigger5 DNA MER2_type 2 166 -2240 7 1221 231 287 191 0 chr17 83476332 83476426 -11796225 + Tigger5 DNA MER2_type 2295 2406 0 7 1221 238 304 29 98 chr17 83476525 83476627 -11796024 + MT2B2 LTR ERVL 166 260 -324 7 1221 386 279 89 9 chr17 83476536 83476648 -11796003 + B1F SINE Alu 13 133 -16 7 1221 212 238 0 16 chr17 83476648 83476712 -11795939 + GA-rich Low_complexity Low_complexity 4 66 0 7 1221 510 17 0 0 chr17 83477650 83477709 -11794942 + (GA)n Simple_repeat Simple_repeat 2 60 0 7 1221 207 211 35 17 chr17 83478152 83478210 -11794441 + (CAGGG)n Simple_repeat Simple_repeat 4 62 0 7 1221 268 324 37 0 chr17 83478400 83478508 -11794143 + HAL1 LINE L1 2224 2335 -172 7 1221 24 32 0 0 chr17 83478639 83478670 -11793981 + AT_rich Low_complexity Low_complexity 1 31 0 7 1221 1235 34 0 27 chr17 83478990 83479140 -11793511 - B1_Mm SINE Alu -1 146 1 7 1221 253 329 12 24 chr17 83479207 83479291 -11793360 + MLT2B2 LTR ERVL 15 97 -418 7 1221 847 299 42 86 chr17 83479216 83479575 -11793076 + MTEa LTR MaLR 22 364 -15 7 1221 340 182 0 0 chr17 83479941 83479996 -11792655 + ID_B1 SINE B4 137 191 -33 7 1221 274 290 84 78 chr17 83480391 83480533 -11792118 + MLT1H LTR MaLR 242 384 -165 7 1221 689 262 6 36 chr17 83480609 83480775 -11791876 - RSINE1 SINE B4 -2 163 3 7 1221 271 226 0 0 chr17 83480775 83480828 -11791823 + MLT1H LTR MaLR 497 549 0 7 1221 902 151 20 3 chr17 83482203 83482514 -11790137 + (CA)n Simple_repeat Simple_repeat 1 316 0 7 1221 276 260 0 83 chr17 83482553 83482637 -11790014 + RMER30 DNA MER1_type 6 82 -120 7 1221 278 231 15 0 chr17 83482669 83482734 -11789917 - Charlie12 DNA MER1_type -2755 118 53 7 1221 299 297 285 12 chr17 83482830 83483079 -11789572 + MLT1K LTR MaLR 277 593 -2 7 1221 27 0 0 0 chr17 83483989 83484016 -11788635 + AT_rich Low_complexity Low_complexity 1 27 0 7 1221 253 102 34 0 chr17 83484463 83484522 -11788129 + (TTTTTG)n Simple_repeat Simple_repeat 5 65 0 7 1221 237 350 10 40 chr17 83484594 83484695 -11787956 - RSINE1 SINE B4 -14 151 54 7 1221 258 296 32 49 chr17 83484721 83484736 -11787915 - B4A SINE B4 -98 194 134 7 1221 266 326 0 42 chr17 83484736 83484832 -11787819 - PB1D10 SINE Alu -24 93 2 7 1221 258 296 32 49 chr17 83484832 83484845 -11787806 - B4A SINE B4 -98 133 70 7 1221 336 338 26 26 chr17 83485268 83485420 -11787231 - Tigger12c DNA MER2_type -2 732 581 7 1221 315 342 119 25 chr17 83485544 83485787 -11786864 - LTR78 LTR ERV1 -115 1189 924 7 1221 283 316 198 4 chr17 83485809 83486041 -11786610 - RMER12 LTR ERVK -334 988 712 7 1221 847 240 15 20 chr17 83486112 83486316 -11786335 + B3 SINE B2 5 207 -9 7 1221 649 284 54 59 chr17 83486337 83486558 -11786093 + B4A SINE B4 5 224 -68 7 1221 224 30 30 0 chr17 83486558 83486591 -11786060 + (CAAAA)n Simple_repeat Simple_repeat 4 37 0 7 1221 260 319 71 21 chr17 83487055 83487196 -11785455 - RSINE1 SINE B4 -15 150 3 7 1221 368 281 44 21 chr17 83487392 83487600 -11785051 + C-rich Low_complexity Low_complexity 1 212 0 7 1221 304 247 26 13 chr17 83488223 83488301 -11784350 - ID4_ SINE ID -4 79 1 7 1221 230 303 90 21 chr17 83488317 83488462 -11784189 - L1M5 LINE L1 -1134 5012 4858 7 1221 423 0 0 0 chr17 83488476 83488523 -11784128 + (GA)n Simple_repeat Simple_repeat 2 48 0 7 1221 1055 362 142 26 chr17 83489060 83490083 -11782568 + L4 LINE RTE 576 1716 -313 7 1221 372 43 0 0 chr17 83490224 83490270 -11782381 + (TA)n Simple_repeat Simple_repeat 1 46 0 7 1221 566 297 142 43 chr17 83490947 83491271 -11781380 + MLT1J LTR MaLR 30 385 -127 7 1221 419 214 51 18 chr17 83491817 83491950 -11780701 + PB1D7 SINE Alu 17 148 0 7 1221 947 228 25 34 chr17 83491968 83492172 -11780479 + B3 SINE B2 9 210 -6 7 1221 236 345 108 28 chr17 83492327 83492753 -11779898 + L1MEg LINE L1 1026 1485 -4599 7 1221 234 0 0 0 chr17 83492823 83492849 -11779802 + (TG)n Simple_repeat Simple_repeat 1 26 0 7 152 324 0 0 0 chr17 83492849 83492884 -11779767 + (GA)n Simple_repeat Simple_repeat 1 36 0 7 1222 755 296 18 5 chr17 83493311 83493528 -11779123 + ID_B1 SINE B4 5 224 0 7 1222 217 227 0 0 chr17 83493534 83493578 -11779073 + GA-rich Low_complexity Low_complexity 1 44 0 7 1222 387 185 0 0 chr17 83493782 83493874 -11778777 + (CA)n Simple_repeat Simple_repeat 2 93 0 7 1222 193 287 120 60 chr17 83494586 83494686 -11777965 - MIRb SINE MIR -32 236 131 7 1222 401 240 216 37 chr17 83494882 83495016 -11777635 - RSINE1 SINE B4 -6 159 2 7 1222 297 206 160 27 chr17 83496505 83496580 -11776071 + PB1D9 SINE Alu 5 89 -31 7 1222 200 267 0 0 chr17 83496580 83496625 -11776026 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1222 851 180 11 0 chr17 83496626 83496804 -11775847 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 7 1222 280 210 0 24 chr17 83496798 83496881 -11775770 + (TATG)n Simple_repeat Simple_repeat 2 82 0 7 1222 249 356 15 29 chr17 83496925 83497061 -11775590 - Charlie4z DNA MER1_type -19 148 15 7 1222 590 196 281 6 chr17 83499805 83499969 -11772682 - B3 SINE B2 -3 213 5 7 1222 486 0 0 0 chr17 83501932 83501986 -11770665 + (TC)n Simple_repeat Simple_repeat 2 55 0 1 1222 249 33 0 0 chr17 83502853 83502883 -11769768 + (TGGA)n Simple_repeat Simple_repeat 3 32 0 2 1222 1540 0 0 11 chr17 83502883 83503065 -11769586 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 3 1222 1158 78 0 0 chr17 83503588 83503768 -11768883 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 1222 1161 80 0 0 chr17 83503788 83504214 -11768437 + (CA)n Simple_repeat Simple_repeat 1 426 0 4 1222 627 209 22 158 chr17 83504717 83504939 -11767712 - B2_Mm2 SINE B2 -3 192 1 5 1222 369 358 47 7 chr17 83505141 83505290 -11767361 + MER5B DNA MER1_type 7 161 -17 6 1222 558 262 46 20 chr17 83505305 83505326 -11767325 - MER5B DNA MER1_type -20 158 138 7 1222 243 0 0 0 chr17 83505326 83505353 -11767298 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 1222 558 262 46 20 chr17 83505353 83505483 -11767168 - MER5B DNA MER1_type -41 137 3 7 1222 424 254 27 0 chr17 83505488 83505598 -11767053 - MER5A1 DNA MER1_type -8 158 46 9 1222 256 219 145 117 chr17 83505670 83505815 -11766836 - MER5B DNA MER1_type -29 149 1 7 1222 396 59 0 0 chr17 83505840 83505891 -11766760 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 1222 351 0 0 0 chr17 83505891 83505930 -11766721 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1222 197 180 0 20 chr17 83506035 83506086 -11766565 + CT-rich Low_complexity Low_complexity 3 52 0 1 1222 198 0 0 0 chr17 83506320 83506342 -11766309 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1222 633 27 0 0 chr17 83507121 83507196 -11765455 + (GA)n Simple_repeat Simple_repeat 2 76 0 1 1222 284 215 0 12 chr17 83507188 83507202 -11765449 + polypurine Low_complexity Low_complexity 2 15 0 1 1222 1413 51 0 0 chr17 83507202 83507380 -11765271 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 1 1222 284 215 0 12 chr17 83507380 83507445 -11765206 + GA-rich Low_complexity Low_complexity 16 79 0 1 1222 522 109 0 0 chr17 83507847 83507939 -11764712 + (CA)n Simple_repeat Simple_repeat 1 92 0 1 1222 435 19 0 0 chr17 83508532 83508584 -11764067 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1222 477 0 0 0 chr17 83508584 83508636 -11764015 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 1222 416 194 192 10 chr17 83510273 83510372 -11762279 + PB1D10 SINE Alu 1 117 0 2 1222 26 0 0 0 chr17 83510395 83510421 -11762230 + AT_rich Low_complexity Low_complexity 1 26 0 2 1222 1287 96 45 0 chr17 83510681 83510859 -11761792 + B2_Mm2 SINE B2 2 187 -8 2 1222 459 0 0 0 chr17 83510957 83511008 -11761643 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 1222 378 0 0 0 chr17 83511008 83511049 -11761602 + (GA)n Simple_repeat Simple_repeat 1 42 0 2 1222 567 0 0 0 chr17 83511315 83511378 -11761273 + (GTTTG)n Simple_repeat Simple_repeat 1 63 0 2 1222 847 186 0 7 chr17 83511378 83511510 -11761141 - B1_Mur3 SINE Alu -13 136 5 2 1222 528 59 0 0 chr17 83512414 83512482 -11760169 + (GA)n Simple_repeat Simple_repeat 1 68 0 2 1222 203 216 0 19 chr17 83512935 83512987 -11759664 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 2 1222 243 79 0 0 chr17 83513440 83513478 -11759173 + (A)n Simple_repeat Simple_repeat 1 38 0 3 1222 628 189 0 37 chr17 83514156 83514343 -11758308 + CT-rich Low_complexity Low_complexity 1 180 0 3 1222 181 242 0 0 chr17 83514827 83514860 -11757791 - L2c LINE L2 -12 3375 3343 3 1222 456 19 0 0 chr17 83515154 83515207 -11757444 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 1222 197 79 26 0 chr17 83516140 83516155 -11756496 + (TAAAAA)n Simple_repeat Simple_repeat 1 16 0 3 1222 1238 41 0 7 chr17 83516155 83516303 -11756348 + B1_Mm SINE Alu 1 147 0 3 1222 197 79 26 0 chr17 83516303 83516325 -11756326 + (TAAAAA)n Simple_repeat Simple_repeat 5 26 0 3 1222 492 269 169 32 chr17 83516689 83516918 -11755733 + MTE2b LTR MaLR 70 314 -65 3 1222 777 140 0 72 chr17 83517256 83517449 -11755202 + (TA)n Simple_repeat Simple_repeat 1 179 0 3 1222 195 129 0 0 chr17 83517448 83517479 -11755172 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1222 454 298 32 19 chr17 83517684 83517838 -11754813 - MTEa LTR MaLR -14 365 210 4 1222 1021 55 0 0 chr17 83517836 83517963 -11754688 + B1_Mm SINE Alu 21 147 0 4 1222 740 67 106 0 chr17 83519469 83519573 -11753078 - BC1_Mm scRNA scRNA -37 115 1 4 1222 239 224 94 94 chr17 83519533 83519597 -11753054 - ZP3AR Satellite Satellite -130 82 19 4 1222 390 21 0 0 chr17 83519691 83519738 -11752913 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1222 871 99 46 12 chr17 83519736 83519909 -11752742 + (CAGAGA)n Simple_repeat Simple_repeat 1 179 0 4 1222 257 200 20 20 chr17 83519913 83519964 -11752687 - ID4 SINE ID -28 55 5 4 1222 978 298 21 25 chr17 83520096 83520378 -11752273 + MLT1F LTR MaLR 2 282 -266 4 1222 595 244 128 96 chr17 83520399 83520696 -11751955 + ORR1E LTR MaLR 18 350 -29 4 1222 959 285 49 4 chr17 83520682 83520963 -11751688 + MLT1F LTR MaLR 281 569 0 4 1222 271 271 11 56 chr17 83520967 83521057 -11751594 - MIRc SINE MIR -75 193 108 4 1222 189 0 0 0 chr17 83521122 83521143 -11751508 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 5 1222 420 287 11 0 chr17 83521992 83522086 -11750565 + PB1D10 SINE Alu 2 96 -21 5 1222 826 78 0 9 chr17 83522877 83522993 -11749658 - B1_Mm SINE Alu 0 147 33 5 1222 200 307 69 79 chr17 83524146 83524312 -11748339 - MIRc SINE MIR -92 176 9 5 1222 191 114 29 0 chr17 83525162 83525197 -11747454 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 5 1222 798 219 48 43 chr17 83525587 83525616 -11747035 - B3A SINE B2 -4 194 166 5 1222 438 127 0 0 chr17 83525616 83525687 -11746964 + (CA)n Simple_repeat Simple_repeat 2 72 0 5 1222 798 219 48 43 chr17 83525687 83525843 -11746808 - B3A SINE B2 -33 165 8 5 1222 263 339 90 51 chr17 83525990 83526167 -11746484 + MIRb SINE MIR 76 259 -9 5 1222 805 281 91 15 chr17 83526243 83526507 -11746144 - B4A SINE B4 0 292 9 5 1222 223 211 0 37 chr17 83526986 83527040 -11745611 + C-rich Low_complexity Low_complexity 2 53 0 5 1222 248 225 50 0 chr17 83527298 83527378 -11745273 + (TTCA)n Simple_repeat Simple_repeat 2 85 0 6 1222 363 322 102 42 chr17 83527852 83528462 -11744189 + L2a LINE L2 2729 3401 -25 6 1222 1920 144 80 12 chr17 83529913 83530251 -11742400 - ORR1B2 LTR MaLR -2 365 5 6 1222 180 188 47 0 chr17 83530652 83530716 -11741935 + GA-rich Low_complexity Low_complexity 4 70 0 6 1222 845 308 7 40 chr17 83530768 83531066 -11741585 - B4A SINE B4 0 292 5 6 1222 1456 60 0 16 chr17 83531183 83531369 -11741282 - B2_Mm2 SINE B2 -9 186 4 6 1222 370 294 0 10 chr17 83531759 83531862 -11740789 + PB1D10 SINE Alu 1 102 -15 6 1222 187 313 144 20 chr17 83531894 83532072 -11740579 - MIR SINE MIR -59 209 3 6 1222 288 0 0 0 chr17 83532450 83532482 -11740169 + (TA)n Simple_repeat Simple_repeat 1 32 0 6 1222 367 302 31 0 chr17 83533237 83533333 -11739318 + MLT1J2 LTR MaLR 42 140 -308 6 1222 181 206 173 27 chr17 83534410 83534485 -11738166 + L2 LINE L2 2841 2926 -493 7 1222 343 297 33 17 chr17 83535710 83535830 -11736821 - MER103 DNA DNA -3 163 42 7 1222 468 0 0 0 chr17 83536053 83536105 -11736546 + (TC)n Simple_repeat Simple_repeat 1 52 0 7 1222 2696 150 5 7 chr17 83536250 83536672 -11735979 + MTC LTR MaLR 1 421 0 7 1222 352 256 215 44 chr17 83536795 83536930 -11735721 + MER5A DNA MER1_type 3 160 -29 7 1222 593 311 82 0 chr17 83537662 83537842 -11734809 + MER2 DNA MER2_type 16 211 -134 7 1222 423 0 0 0 chr17 83537842 83537889 -11734762 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 1222 593 311 82 0 chr17 83537889 83537904 -11734747 + MER2 DNA MER2_type 212 226 -119 7 1222 4525 12 0 0 chr17 83539584 83540077 -11732574 + MT2_Mm LTR ERVL 1 493 0 7 1222 46097 15 6 0 chr17 83540077 83545403 -11727248 + MERVL-int LTR ERVL 1 5360 -125 7 1222 366 191 46 35 chr17 83545403 83545490 -11727161 + ORR1A3-int LTR MaLR 553 640 -1323 7 1222 305 0 0 0 chr17 83545490 83545528 -11727123 + MERVL-int LTR ERVL 5448 5485 0 7 1222 4542 10 0 0 chr17 83545528 83546021 -11726630 + MT2_Mm LTR ERVL 1 493 0 7 1222 485 244 142 0 chr17 83546090 83546217 -11726434 - RSINE1 SINE B4 -19 146 2 7 1222 408 20 0 0 chr17 83546455 83546504 -11726147 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 1222 712 233 94 101 chr17 83547062 83547339 -11725312 + B4 SINE B4 2 276 -16 8 1222 263 159 29 0 chr17 83549556 83549625 -11723026 + (CAGAGA)n Simple_repeat Simple_repeat 2 72 0 8 1222 395 272 65 14 chr17 83549865 83549922 -11722729 - MIR SINE MIR 0 262 202 8 1222 2111 88 12 59 chr17 83549922 83550260 -11722391 + RLTRETN_Mm LTR ERVK 1 322 0 8 1222 395 286 62 18 chr17 83550260 83550362 -11722289 - MIR SINE MIR -63 205 103 8 1222 2300 133 54 20 chr17 83550370 83550392 -11722259 - MTC LTR MaLR -15 406 390 8 1222 2288 95 0 66 chr17 83550392 83550741 -11721910 + ORR1A3 LTR MaLR 1 326 0 8 1222 2300 133 54 20 chr17 83550741 83551109 -11721542 - MTC LTR MaLR -32 389 3 8 1222 574 315 134 45 chr17 83551727 83552063 -11720588 - MLT1G3 LTR MaLR -219 376 11 8 1222 2722 18 179 0 chr17 83552475 83552811 -11719840 - MTA_Mm LTR MaLR 0 396 1 8 1222 9342 31 3 2 chr17 83552813 83553908 -11718743 - MTA_Mm-int LTR MaLR -2 1096 1 8 1222 2722 18 179 0 chr17 83553908 83554244 -11718407 - MTA_Mm LTR MaLR 0 396 1 8 1222 316 346 135 0 chr17 83554764 83554920 -11717731 + MIRb SINE MIR 71 247 -21 8 1222 269 198 9 65 chr17 83554926 83555034 -11717617 + CT-rich Low_complexity Low_complexity 6 107 0 9 1222 374 382 62 12 chr17 83557133 83557377 -11715274 - L1M5 LINE L1 -509 5615 5360 9 1222 258 262 50 0 chr17 83557716 83557825 -11714826 + L1M5 LINE L1 5330 5440 -722 9 1222 182 150 0 24 chr17 83557827 83557868 -11714783 + GA-rich Low_complexity Low_complexity 3 42 0 9 1222 315 275 159 95 chr17 83557875 83558064 -11714587 - MER63A DNA AcHobo 0 210 10 9 1222 1275 86 0 0 chr17 83558391 83558554 -11714097 + B2_Mm2 SINE B2 2 164 -31 9 1222 703 104 0 17 chr17 83558556 83558673 -11713978 + (GGAA)n Simple_repeat Simple_repeat 2 116 0 9 1222 568 186 29 0 chr17 83558725 83558827 -11713824 + PB1D9 SINE Alu 10 114 -6 9 1222 21 71 0 0 chr17 83558828 83558870 -11713781 + AT_rich Low_complexity Low_complexity 1 42 0 9 1222 607 297 0 0 chr17 83558903 83559051 -11713600 - RSINE1 SINE B4 -16 149 2 9 1222 371 292 101 14 chr17 83559150 83559289 -11713362 - Arthur1 DNA Tip100 -528 3419 3269 1 1222 386 292 103 13 chr17 83559312 83559468 -11713183 - Arthur1 DNA Tip100 -3111 836 667 1 1222 228 329 72 85 chr17 83559586 83559674 -11712977 + MLT1D LTR MaLR 44 127 -378 1 1222 776 224 0 33 chr17 83559674 83559826 -11712825 + B1_Mur1 SINE Alu 3 149 0 1 1222 228 329 72 85 chr17 83559826 83559890 -11712761 + MLT1D LTR MaLR 128 194 -311 1 1222 447 257 245 27 chr17 83559901 83560116 -11712535 + MLT1D LTR MaLR 224 504 -1 1 1222 316 251 230 42 chr17 83560125 83560316 -11712335 - Arthur1 DNA Tip100 -3422 525 299 1 1222 309 354 50 35 chr17 83560317 83560391 -11712260 + B4A SINE B4 1 74 -218 1 1222 1114 178 51 9 chr17 83560391 83560607 -11712044 + URR1B DNA MER1_type 1 225 0 1 1222 309 354 50 35 chr17 83560607 83560731 -11711920 + B4A SINE B4 75 202 -90 1 1222 216 0 0 0 chr17 83560786 83560810 -11711841 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 1222 405 70 0 0 chr17 83560820 83560877 -11711774 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 1222 257 203 65 48 chr17 83560982 83561044 -11711607 - Arthur1 DNA Tip100 -3855 92 30 1 1222 189 335 81 39 chr17 83561144 83561427 -11711224 + L3 LINE CR1 2621 2915 -1574 1 1222 407 296 19 44 chr17 83562163 83562322 -11710329 + MIR SINE MIR 108 262 0 1 1222 268 225 83 14 chr17 83562541 83562613 -11710038 + ID4_ SINE ID 3 79 -4 1 1222 861 222 28 0 chr17 83562559 83562739 -11709912 + ID_B1 SINE B4 26 210 -14 1 1222 490 224 0 57 chr17 83563615 83563738 -11708913 - PB1D10 SINE Alu -1 116 1 1 1222 294 29 0 0 chr17 83564978 83565013 -11707638 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1222 281 261 98 67 chr17 83567092 83567146 -11705505 - MT2B LTR ERVL -234 367 199 1 1222 561 178 9 27 chr17 83567146 83567256 -11705395 - B1_Mur3 SINE Alu 0 149 42 1 1222 466 87 0 113 chr17 83567258 83567544 -11705107 + CT-rich Low_complexity Low_complexity 1 253 0 1 1222 599 231 2 3 chr17 83567572 83568202 -11704449 + CT-rich Low_complexity Low_complexity 1 628 0 1 1222 396 357 0 0 chr17 83568204 83568361 -11704290 + C-rich Low_complexity Low_complexity 6 162 0 1 1222 345 236 17 69 chr17 83568354 83568527 -11704124 + SUBTEL_sa Satellite Satellite 3 166 -8 1 1222 590 207 2 0 chr17 83568581 83569001 -11703650 + CT-rich Low_complexity Low_complexity 1 421 0 1 1222 442 319 0 25 chr17 83569045 83569392 -11703259 + C-rich Low_complexity Low_complexity 1 338 0 1 1222 286 258 22 50 chr17 83569388 83569527 -11703124 + SUBTEL_sa Satellite Satellite 3 137 -37 1 1222 231 6 5 154 chr17 83569550 83569758 -11702893 + CT-rich Low_complexity Low_complexity 3 179 0 1 1222 829 252 71 99 chr17 83570009 83570274 -11702377 + B4 SINE B4 9 269 -23 1 1222 537 44 0 0 chr17 83570274 83570342 -11702309 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 1222 829 252 71 99 chr17 83570342 83570358 -11702293 + B4 SINE B4 270 282 -10 1 1222 929 152 0 7 chr17 83570413 83570552 -11702099 + B1_Mur4 SINE Alu 3 140 -10 1 1222 252 59 0 0 chr17 83570552 83570586 -11702065 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1222 1128 119 67 17 chr17 83570593 83570773 -11701878 + B2_Mm2 SINE B2 5 193 -2 1 1222 219 186 0 0 chr17 83570783 83570826 -11701825 + GA-rich Low_complexity Low_complexity 3 45 0 1 1222 422 298 126 20 chr17 83570961 83571160 -11701491 + MIRb SINE MIR 43 262 -6 1 1222 1221 178 117 127 chr17 83571268 83571345 -11701306 - ORR1B2 LTR MaLR 0 367 328 1 1222 1102 51 73 0 chr17 83571345 83571482 -11701169 - B1_Mus2 SINE Alu 0 147 1 1 1222 1221 178 117 127 chr17 83571482 83571720 -11700931 - ORR1B2 LTR MaLR -40 327 55 1 1222 1123 233 125 6 chr17 83572191 83572519 -11700132 - ORR1D2 LTR MaLR 0 370 4 1 1222 720 163 22 52 chr17 83575585 83575721 -11696930 + B1_Mur2 SINE Alu 5 136 -13 1 1222 2604 145 29 5 chr17 83576654 83577064 -11695587 + MTC LTR MaLR 1 420 -1 1 1222 544 178 222 0 chr17 83577181 83577316 -11695335 + B3 SINE B2 47 211 -5 1 1222 516 213 0 0 chr17 83578860 83578982 -11693669 + (CA)n Simple_repeat Simple_repeat 2 123 0 1 1222 264 307 67 22 chr17 83579319 83579409 -11693242 + MLT1F2 LTR MaLR 44 137 -423 1 1222 327 329 40 58 chr17 83579556 83579730 -11692921 + MLT1F2 LTR MaLR 388 558 -2 1 1222 873 275 56 34 chr17 83579850 83580117 -11692534 - MLT1A0 LTR MaLR -89 276 4 1 1222 230 290 50 99 chr17 83580117 83580247 -11692404 - RLTR19C LTR ERVK -35 471 350 1 1222 212 301 100 40 chr17 83580248 83580402 -11692249 - MIR SINE MIR -101 167 1 1 1222 196 329 94 31 chr17 83580402 83580539 -11692112 - MIRb SINE MIR -34 234 88 1 1222 1531 52 0 45 chr17 83581931 83582132 -11690519 - B2_Mm1a SINE B2 0 193 2 1 1222 417 267 133 22 chr17 83582711 83582933 -11689718 - MIR SINE MIR -9 259 24 1 1222 1013 248 76 113 chr17 83583660 83584014 -11688637 + ORR1D2 LTR MaLR 28 368 -2 1 1222 1637 192 41 6 chr17 83584016 83584330 -11688321 + ORR1D2-int LTR MaLR 1 325 -1045 1 1222 953 140 0 0 chr17 83584330 83584466 -11688185 + B1_Mus1 SINE Alu 1 136 -12 1 1222 2387 146 236 93 chr17 83584466 83585102 -11687549 - RMER19B LTR ERVK -175 727 1 1 1222 329 193 0 0 chr17 83585105 83585162 -11687489 + ORR1D2-int LTR MaLR 1314 1370 0 1 1222 1091 255 115 66 chr17 83585164 83585194 -11687457 + ORR1D2 LTR MaLR 3 31 -339 1 1222 1072 76 0 59 chr17 83585194 83585347 -11687304 + B1_Mus2 SINE Alu 3 146 -1 1 1222 1091 255 115 66 chr17 83585347 83585445 -11687206 + ORR1D2 LTR MaLR 32 111 -259 1 1222 1671 219 16 222 chr17 83585445 83586215 -11686436 - RMER19C LTR ERVK 0 611 1 1 1222 1091 255 115 66 chr17 83586215 83586434 -11686217 + ORR1D2 LTR MaLR 112 368 -2 1 1222 195 286 139 47 chr17 83587128 83587271 -11685380 - MIRm SINE MIR -34 174 33 1 1222 436 302 64 74 chr17 83587606 83587889 -11684762 - L1ME3A LINE L1 -22 6151 5872 1 1222 519 288 17 0 chr17 83588316 83588434 -11684217 + B1F2 SINE Alu 1 120 -29 1 1222 937 134 14 14 chr17 83588470 83588614 -11684037 + B1_Mur4 SINE Alu 1 144 -6 1 1222 663 212 104 46 chr17 83588651 83588824 -11683827 + B3 SINE B2 11 193 -23 1 1222 230 73 24 0 chr17 83588902 83588943 -11683708 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1222 568 317 59 107 chr17 83589063 83589180 -11683471 - MLT1A0 LTR MaLR -3 362 247 1 1222 594 211 96 16 chr17 83589180 83589305 -11683346 + B1_Mur1 SINE Alu 2 136 -13 1 1222 568 317 59 107 chr17 83589305 83589561 -11683090 - MLT1A0 LTR MaLR -119 246 7 1 1222 405 276 85 57 chr17 83590177 83590354 -11682297 + MIRb SINE MIR 81 262 -6 1 1222 343 131 16 16 chr17 83590522 83590584 -11682067 + B3A SINE B2 1 62 -136 1 1222 1135 55 0 0 chr17 83590586 83590731 -11681920 - L1Md_F2 LINE L1 -231 6351 6207 1 1222 1583 68 29 0 chr17 83590731 83590937 -11681714 + L1_Mus1 LINE L1 6355 6566 -1 1 1222 779 231 0 56 chr17 83590954 83591133 -11681518 + B3 SINE B2 48 216 0 1 1222 822 128 32 0 chr17 83591393 83591518 -11681133 + B3 SINE B2 2 130 -86 1 1222 220 281 51 117 chr17 83591402 83591539 -11681112 + RSINE1 SINE B4 16 143 -22 1 1222 607 235 35 11 chr17 83592191 83592359 -11680292 + B3A SINE B2 8 186 -9 1 1222 1125 193 61 0 chr17 83592899 83593111 -11679540 - URR1B DNA MER1_type 0 225 1 1 1222 246 383 18 53 chr17 83593139 83593252 -11679399 - PB1D10 SINE Alu -2 115 7 1 1222 595 314 58 0 chr17 83593156 83593328 -11679323 - ID_B1 SINE B4 -39 185 4 1 1222 522 299 61 35 chr17 83593524 83593753 -11678898 + MIR SINE MIR 28 262 0 1 1222 211 355 117 31 chr17 83594845 83595008 -11677643 - MER5A DNA MER1_type -12 177 1 1 1222 411 323 110 40 chr17 83595074 83595374 -11677277 - L2a LINE L2 -14 3412 3092 1 1222 209 356 87 41 chr17 83595545 83595789 -11676862 + L2a LINE L2 3114 3410 -16 1 1222 195 42 0 0 chr17 83596701 83596725 -11675926 + (GA)n Simple_repeat Simple_repeat 2 25 0 1 1222 222 62 0 0 chr17 83597857 83597889 -11674762 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 1 1222 338 153 108 27 chr17 83600338 83600412 -11672239 + MT2B LTR ERVL 168 247 -354 1 1222 706 127 91 25 chr17 83600351 83600472 -11672179 + B1_Mur3 SINE Alu 21 149 0 1 1222 378 0 0 0 chr17 83601608 83601650 -11671001 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 1 1222 1157 44 0 0 chr17 83601650 83601787 -11670864 - B1_Mus1 SINE Alu -10 138 2 1 1222 263 336 58 29 chr17 83601791 83601929 -11670722 - MIR SINE MIR -105 157 16 1 1222 258 156 0 0 chr17 83602015 83602060 -11670591 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 1 1222 185 100 0 48 chr17 83602492 83602534 -11670117 + (TCTG)n Simple_repeat Simple_repeat 1 40 0 1 1222 950 50 14 14 chr17 83602534 83602677 -11669974 + (TCTCCC)n Simple_repeat Simple_repeat 6 148 0 1 1222 260 368 40 44 chr17 83604158 83604408 -11668243 - L2 LINE L2 -649 2770 2522 1 1222 23 0 0 0 chr17 83604460 83604483 -11668168 + AT_rich Low_complexity Low_complexity 1 23 0 1 1222 228 86 0 0 chr17 83604541 83604576 -11668075 + (G)n Simple_repeat Simple_repeat 1 35 0 1 1222 529 236 95 46 chr17 83604629 83604831 -11667820 - MIRc SINE MIR -37 225 16 1 1222 210 91 0 0 chr17 83605495 83605528 -11667123 + (TTTTG)n Simple_repeat Simple_repeat 5 37 0 1 1222 612 191 12 98 chr17 83605529 83605692 -11666959 - B1F SINE Alu 0 149 1 1 1222 207 191 21 0 chr17 83606192 83606239 -11666412 + C-rich Low_complexity Low_complexity 1 48 0 1 1222 181 229 0 0 chr17 83606462 83606497 -11666154 + L3 LINE CR1 3904 3938 -551 1 1222 190 349 58 0 chr17 83606529 83606615 -11666036 - L2a LINE L2 -47 3379 3289 1 1222 369 297 96 129 chr17 83606913 83607215 -11665436 + B4A SINE B4 1 292 0 1 1222 22 0 0 0 chr17 83607233 83607255 -11665396 + AT_rich Low_complexity Low_complexity 1 22 0 1 1222 589 237 27 54 chr17 83607278 83607425 -11665226 + B1F2 SINE Alu 7 149 0 1 1222 263 290 85 52 chr17 83608640 83608793 -11663858 + MIRb SINE MIR 68 225 -43 1 1222 824 174 0 80 chr17 83609474 83609636 -11663015 + B1_Mur4 SINE Alu 1 149 -1 1 1222 293 208 14 0 chr17 83609636 83609708 -11662943 + GA-rich Low_complexity Low_complexity 1 73 0 1 1222 345 24 0 0 chr17 83612103 83612145 -11660506 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1222 24 67 0 0 chr17 83614392 83614437 -11658214 + GC_rich Low_complexity Low_complexity 1 45 0 1 1222 24 103 0 0 chr17 83614490 83614577 -11658074 + GC_rich Low_complexity Low_complexity 1 87 0 1 1222 32 81 0 0 chr17 83614639 83614713 -11657938 + GC_rich Low_complexity Low_complexity 1 74 0 1 1222 55 56 0 0 chr17 83614737 83614827 -11657824 + GC_rich Low_complexity Low_complexity 1 90 0 1 1222 22 35 0 0 chr17 83614934 83614963 -11657688 + GC_rich Low_complexity Low_complexity 1 29 0 2 1222 27 29 0 0 chr17 83615016 83615050 -11657601 + GC_rich Low_complexity Low_complexity 1 34 0 2 1222 38 96 0 0 chr17 83615078 83615193 -11657458 + GC_rich Low_complexity Low_complexity 1 115 0 2 1222 216 0 0 0 chr17 83617924 83617948 -11654703 + (TGG)n Simple_repeat Simple_repeat 1 24 0 2 1222 223 197 194 15 chr17 83618860 83618927 -11653724 + MIRb SINE MIR 60 138 -130 2 1222 500 290 15 0 chr17 83618988 83619119 -11653532 + RSINE1 SINE B4 4 136 -29 2 1222 318 50 0 0 chr17 83619588 83619628 -11653023 + (GGGA)n Simple_repeat Simple_repeat 4 43 0 2 1222 1250 117 22 61 chr17 83619879 83620107 -11652544 + URR1A DNA MER1_type 8 226 0 2 1222 311 268 22 52 chr17 83621836 83621970 -11650681 + MIRb SINE MIR 131 260 -8 2 1222 246 340 0 20 chr17 83622692 83622791 -11649860 + MER5A1 DNA MER1_type 70 166 0 2 1222 414 0 0 0 chr17 83623399 83623445 -11649206 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 1223 28 61 0 0 chr17 83624341 83624390 -11648261 + AT_rich Low_complexity Low_complexity 1 49 0 2 1223 1844 156 126 24 chr17 83626388 83626769 -11645882 - MTC LTR MaLR -1 420 1 2 1223 5604 123 136 16 chr17 83626769 83627864 -11644787 - MTC-int LTR MaLR 0 1258 32 2 1223 315 130 0 18 chr17 83628364 83628419 -11644232 - MTC-int LTR MaLR -1455 54 1 2 1223 1829 149 129 0 chr17 83628419 83628768 -11643883 - MTC LTR MaLR 0 394 1 2 1223 439 254 88 0 chr17 83629753 83629867 -11642784 + MER106A DNA MER1_type 38 161 -75 2 1223 418 238 114 0 chr17 83629870 83629975 -11642676 + B4A SINE B4 5 121 -171 2 1223 520 306 7 0 chr17 83630101 83630245 -11642406 + RSINE1 SINE B4 4 148 -17 2 1223 590 350 25 21 chr17 83630730 83631057 -11641594 - CR1_Mam LINE CR1 -776 1428 1101 2 1223 378 184 0 0 chr17 83631757 83631833 -11640818 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 2 1223 1066 60 0 0 chr17 83631959 83632093 -11640558 + B1_Mus1 SINE Alu 2 135 -13 2 1223 957 75 27 0 chr17 83632094 83632241 -11640410 + (GAAAA)n Simple_repeat Simple_repeat 4 154 0 2 1223 771 137 56 8 chr17 83632291 83632416 -11640235 + B1_Mur4 SINE Alu 4 134 -16 2 1223 720 71 27 0 chr17 83632416 83632528 -11640123 + (GA)n Simple_repeat Simple_repeat 1 115 0 2 1223 813 263 53 0 chr17 83632571 83632780 -11639871 + ID_B1 SINE B4 2 221 -3 2 1223 829 58 223 0 chr17 83632959 83633080 -11639571 + B1_Mus1 SINE Alu 1 148 0 2 1223 459 0 0 0 chr17 83633080 83633131 -11639520 + (A)n Simple_repeat Simple_repeat 1 51 0 2 1223 729 160 35 0 chr17 83633670 83633991 -11638660 + (TG)n Simple_repeat Simple_repeat 1 332 0 2 1223 522 198 11 22 chr17 83634023 83634204 -11638447 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 1223 484 274 62 36 chr17 83634240 83634433 -11638218 - B3A SINE B2 0 198 1 2 1223 265 254 0 0 chr17 83635072 83635131 -11637520 + ID4_ SINE ID 3 61 -22 2 1223 540 0 0 0 chr17 83636449 83636509 -11636142 + (CAGCC)n Simple_repeat Simple_repeat 1 60 0 2 1223 201 231 0 55 chr17 83636944 83636999 -11635652 + C-rich Low_complexity Low_complexity 5 56 0 2 1223 1049 44 214 0 chr17 83637151 83637310 -11635341 - B2_Mm2 SINE B2 -1 194 2 2 1223 425 268 180 18 chr17 83639229 83639396 -11633255 + B3A SINE B2 1 194 -4 2 1223 772 140 34 40 chr17 83639400 83639549 -11633102 + B1_Mur2 SINE Alu 1 148 -1 2 1223 22 35 0 0 chr17 83639550 83639579 -11633072 + AT_rich Low_complexity Low_complexity 1 29 0 2 1223 508 237 50 8 chr17 83639634 83639753 -11632898 + B3A SINE B2 2 125 -73 2 1223 339 25 0 0 chr17 83639795 83639835 -11632816 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1223 3426 190 56 36 chr17 83639881 83640667 -11631984 - RCHARR1 DNA MER1_type -69 905 104 2 1223 455 183 95 9 chr17 83640713 83640818 -11631833 - RSINE1 SINE B4 -43 122 9 2 1223 309 172 0 0 chr17 83640829 83640893 -11631758 + (CAT)n Simple_repeat Simple_repeat 2 65 0 2 1223 394 255 98 0 chr17 83640905 83641007 -11631644 - RCHARR1 DNA MER1_type -862 112 1 2 1223 2635 116 49 60 chr17 83641059 83641508 -11631143 + RLTR41 LTR ERV1 1 444 -2 2 1223 696 203 0 55 chr17 83641510 83641656 -11630995 + B1_Mur1 SINE Alu 12 149 0 2 1223 898 226 158 33 chr17 83642198 83642527 -11630124 + ORR1D1 LTR MaLR 1 370 -4 2 1223 2066 197 7 17 chr17 83642768 83643187 -11629464 + MTD LTR MaLR 5 419 0 2 1223 390 115 0 0 chr17 83643444 83643505 -11629146 + (TCC)n Simple_repeat Simple_repeat 3 63 0 2 1223 503 182 8 0 chr17 83644158 83644279 -11628372 + GA-rich Low_complexity Low_complexity 4 125 0 2 1223 787 237 22 6 chr17 83644286 83644464 -11628187 - ID_B1 SINE B4 -43 181 1 2 1223 356 353 0 25 chr17 83644466 83644585 -11628066 - MER45R DNA Tip100 -1465 116 1 2 1223 395 332 45 86 chr17 83644700 83644840 -11627811 + MLT1G1 LTR MaLR 161 286 -293 2 1223 404 35 35 0 chr17 83644840 83644897 -11627754 + (CATA)n Simple_repeat Simple_repeat 2 60 0 2 1223 395 286 77 33 chr17 83644897 83645081 -11627570 + MLT1G1 LTR MaLR 287 416 -163 2 1223 363 23 0 0 chr17 83645081 83645125 -11627526 + (CAA)n Simple_repeat Simple_repeat 3 46 0 2 1223 746 164 6 0 chr17 83645364 83645529 -11627122 + CT-rich Low_complexity Low_complexity 2 167 0 2 1223 864 249 52 5 chr17 83646196 83646406 -11626245 + ID_B1 SINE B4 2 221 -3 2 1223 360 200 0 0 chr17 83646406 83646481 -11626170 + GA-rich Low_complexity Low_complexity 1 75 0 2 1223 312 244 12 25 chr17 83646507 83646587 -11626064 + B3A SINE B2 1 79 -119 2 1223 297 319 11 11 chr17 83646587 83646602 -11626049 + B4A SINE B4 1 95 -197 2 1223 270 336 14 92 chr17 83646730 83646871 -11625780 + MamGypLTR1d LTR Gypsy 16 145 -668 2 1223 429 54 0 0 chr17 83647668 83647724 -11624927 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1223 542 208 125 0 chr17 83648141 83648261 -11624390 + RSINE1 SINE B4 5 139 -26 2 1223 369 0 0 0 chr17 83648263 83648304 -11624347 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1223 934 151 11 60 chr17 83648310 83648462 -11624189 + B2_Mm2 SINE B2 2 146 -49 2 1223 261 0 0 0 chr17 83648462 83648491 -11624160 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 1223 297 0 0 0 chr17 83648491 83648523 -11624128 + (GA)n Simple_repeat Simple_repeat 1 33 0 2 1223 934 151 11 60 chr17 83648523 83648552 -11624099 + B2_Mm2 SINE B2 147 174 -21 2 1223 208 233 16 32 chr17 83648552 83648614 -11624037 + (CATATA)n Simple_repeat Simple_repeat 5 65 0 2 1223 585 180 0 35 chr17 83649916 83650031 -11622620 + RSINE1 SINE B4 16 126 -39 2 1223 477 0 0 0 chr17 83651332 83651385 -11621266 + (CTG)n Simple_repeat Simple_repeat 2 54 0 2 1223 405 153 0 0 chr17 83651385 83651457 -11621194 + CT-rich Low_complexity Low_complexity 3 74 0 2 1223 948 167 0 0 chr17 83652213 83652363 -11620288 + B1_Mur4 SINE Alu 1 150 0 2 1223 388 214 24 0 chr17 83652866 83652950 -11619701 + PB1D9 SINE Alu 35 120 0 2 1223 277 325 0 0 chr17 83654132 83654209 -11618442 + ID4_ SINE ID 7 83 0 2 1223 290 91 0 18 chr17 83654449 83654505 -11618146 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 2 1223 1135 68 0 0 chr17 83654514 83654661 -11617990 - B1_Mm SINE Alu 0 147 1 2 1223 527 287 100 20 chr17 83654973 83655237 -11617414 + RLTR19 LTR ERVK 219 506 0 2 1223 512 218 91 30 chr17 83655249 83655405 -11617246 + ORR1C2 LTR MaLR 1 171 -188 2 1223 2880 21 0 0 chr17 83655408 83655745 -11616906 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 1223 20454 37 42 14 chr17 83655745 83658340 -11614311 + IAPEz-int LTR ERVK 8 2674 -3807 2 1223 9131 25 2 5 chr17 83658315 83659400 -11613251 + IAPEz-int LTR ERVK 5400 6481 0 2 1223 2880 21 0 0 chr17 83659400 83659737 -11612914 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 1223 776 152 39 9 chr17 83659738 83659910 -11612741 + ORR1C2 LTR MaLR 181 384 0 2 1223 850 255 42 152 chr17 83659932 83660356 -11612295 - L1_Rod LINE L1 -640 5657 5230 2 1223 736 127 167 0 chr17 83660356 83660482 -11612169 - B1_Mus2 SINE Alu 0 147 1 2 1223 785 255 42 153 chr17 83660482 83660582 -11612069 - L1_Rod LINE L1 -618 5229 5127 2 1223 405 0 0 0 chr17 83660582 83660627 -11612024 + (TTTTG)n Simple_repeat Simple_repeat 4 48 0 2 1223 848 98 0 0 chr17 83660627 83660749 -11611902 - B1_Mus2 SINE Alu -12 135 14 2 1223 380 271 207 14 chr17 83660771 83660988 -11611663 - L1M2 LINE L1 -965 5178 4920 2 1223 468 234 166 16 chr17 83661127 83661314 -11611337 + B3 SINE B2 2 216 0 2 1223 485 217 9 0 chr17 83661338 83661453 -11611198 + L1_Mur3 LINE L1 3250 3365 -2515 2 1223 396 217 91 26 chr17 83661455 83661591 -11611060 + B1_Mur4 SINE Alu 3 148 -2 2 1223 348 287 101 0 chr17 83661721 83661850 -11610801 - L1M2 LINE L1 -1379 4764 4623 2 1223 407 63 16 0 chr17 83661986 83662049 -11610602 + (TCTG)n Simple_repeat Simple_repeat 3 66 0 2 1223 269 239 0 53 chr17 83662251 83662326 -11610325 + PB1 SINE Alu 50 120 -7 2 1223 999 100 7 0 chr17 83662336 83662476 -11610175 + B1_Mus1 SINE Alu 2 142 -6 2 1223 603 44 33 0 chr17 83662477 83662568 -11610083 + (GA)n Simple_repeat Simple_repeat 2 95 0 2 1223 625 168 75 73 chr17 83662572 83662734 -11609917 + RSINE1 SINE B4 3 165 0 2 1223 436 118 0 93 chr17 83662746 83662964 -11609687 + (CA)n Simple_repeat Simple_repeat 1 197 0 2 1223 342 186 17 0 chr17 83663492 83663551 -11609100 + ID4_ SINE ID 16 75 -8 2 1223 188 67 0 32 chr17 83663552 83663583 -11609068 + (CGGGG)n Simple_repeat Simple_repeat 5 34 0 2 1223 288 111 0 0 chr17 83663632 83663677 -11608974 + (TTG)n Simple_repeat Simple_repeat 2 46 0 2 1223 406 276 71 50 chr17 83663677 83663807 -11608844 - ID_B1 SINE B4 -11 213 79 2 1223 1290 47 0 0 chr17 83663837 83664007 -11608644 + (TG)n Simple_repeat Simple_repeat 2 171 0 2 1223 460 265 125 7 chr17 83664593 83664745 -11607906 + Lx8 LINE L1 7087 7256 -217 2 1223 225 0 0 0 chr17 83665207 83665232 -11607419 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 1223 748 176 0 0 chr17 83665232 83665357 -11607294 - B1_Mus1 SINE Alu -10 138 14 2 1223 1177 54 0 0 chr17 83665358 83665505 -11607146 + B1_Mus2 SINE Alu 1 147 0 2 1223 243 122 0 0 chr17 83665505 83665554 -11607097 + (A)n Simple_repeat Simple_repeat 1 49 0 2 1223 654 329 95 37 chr17 83665717 83666217 -11606434 - L1MEc LINE L1 -4793 1840 1256 2 1223 286 196 100 0 chr17 83666243 83666310 -11606341 + PB1D7 SINE Alu 26 98 -52 2 1223 624 299 19 0 chr17 83666410 83666567 -11606084 + B3A SINE B2 1 160 -38 2 1223 432 55 0 0 chr17 83666569 83666624 -11606027 + (CA)n Simple_repeat Simple_repeat 1 55 0 3 1223 595 277 38 33 chr17 83666644 83666857 -11605794 - B3 SINE B2 0 216 3 3 1223 532 257 62 50 chr17 83667210 83667370 -11605281 + MER20 DNA MER1_type 4 165 -54 3 1223 255 152 0 0 chr17 83667390 83667436 -11605215 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1223 612 297 110 85 chr17 83667475 83667803 -11604848 + MLT1A0 LTR MaLR 30 365 0 3 1223 1038 300 86 22 chr17 83668227 83668633 -11604018 + LTR40a LTR ERVL 53 484 -35 3 1223 378 0 0 0 chr17 83668694 83668736 -11603915 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1223 443 293 22 1 chr17 83668871 83669034 -11603617 - L2a LINE L2 -250 3176 3009 3 1223 757 199 14 14 chr17 83669116 83669264 -11603387 + B1_Mus1 SINE Alu 1 148 0 3 1223 407 302 21 0 chr17 83669762 83669858 -11602793 + PB1D10 SINE Alu 12 109 -8 3 1223 229 314 23 31 chr17 83670030 83670158 -11602493 - L2a LINE L2 -498 2921 2795 3 1223 765 276 44 0 chr17 83670159 83670362 -11602289 + B3 SINE B2 1 212 -4 3 1223 570 146 0 0 chr17 83670589 83670685 -11601966 + (TA)n Simple_repeat Simple_repeat 2 97 0 3 1223 666 256 89 30 chr17 83670789 83670958 -11601693 - B3 SINE B2 -37 179 1 3 1223 564 305 130 19 chr17 83671240 83671439 -11601212 + B4A SINE B4 3 230 -62 3 1223 637 301 0 33 chr17 83671439 83671649 -11601002 + B3 SINE B2 1 203 -13 3 1223 564 305 130 19 chr17 83671649 83671710 -11600941 + B4A SINE B4 231 291 -1 3 1223 225 0 0 0 chr17 83671735 83671760 -11600891 + (TA)n Simple_repeat Simple_repeat 1 25 0 3 1223 286 61 0 0 chr17 83671766 83671815 -11600836 + B3 SINE B2 167 215 -1 3 1223 341 211 13 26 chr17 83671829 83671907 -11600744 + B4A SINE B4 216 292 0 3 1223 348 24 0 0 chr17 83671959 83672000 -11600651 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 1223 504 32 0 0 chr17 83672000 83672062 -11600589 + (TAGA)n Simple_repeat Simple_repeat 3 64 0 3 1223 270 374 37 31 chr17 83674312 83674475 -11598176 - L2b LINE L2 -2 3373 3210 3 1223 460 237 0 0 chr17 83674610 83674703 -11597948 - RSINE1 SINE B4 -70 95 3 3 1223 1179 48 7 0 chr17 83674918 83675064 -11597587 + B1_Mm SINE Alu 1 147 0 3 1223 423 0 0 0 chr17 83676267 83676314 -11596337 + (TCTA)n Simple_repeat Simple_repeat 3 49 0 3 1223 447 200 0 23 chr17 83676331 83676418 -11596233 - B1F SINE Alu -63 86 2 3 1223 800 257 63 0 chr17 83677461 83677667 -11594984 + ID_B1 SINE B4 1 219 -5 3 1223 790 279 110 103 chr17 83678524 83679135 -11593516 - RLTR18 LTR ERVK 0 616 2 3 1223 711 243 0 22 chr17 83679549 83679688 -11592963 + B1_Mur1 SINE Alu 2 137 -12 3 1223 2738 219 100 11 chr17 83679717 83680446 -11592205 + Lx9 LINE L1 6578 7371 -273 3 1223 5008 139 134 19 chr17 83680455 83680541 -11592110 + MTC-int LTR MaLR 3 88 -1170 3 1223 3579 77 9 0 chr17 83680541 83680995 -11591656 + L1_Mus1 LINE L1 6109 6566 -1 3 1223 5008 139 134 19 chr17 83680995 83681892 -11590759 + MTC-int LTR MaLR 89 1099 -159 3 1223 702 140 9 0 chr17 83681919 83682026 -11590625 - B1_Mur3 SINE Alu 0 149 42 3 1223 228 111 0 167 chr17 83681978 83682032 -11590619 - 4.5SRNA scRNA scRNA -10 84 40 3 1223 284 0 0 160 chr17 83682035 83682179 -11590472 + (CTCTG)n Simple_repeat Simple_repeat 5 125 0 3 1223 450 235 0 0 chr17 83682179 83682349 -11590302 + CT-rich Low_complexity Low_complexity 2 171 0 3 1223 541 133 0 71 chr17 83682349 83682462 -11590189 + (TCTCTG)n Simple_repeat Simple_repeat 5 109 0 3 1223 392 121 0 33 chr17 83682462 83682522 -11590129 - B1_Mus2 SINE Alu -88 59 2 3 1223 748 192 42 6 chr17 83682524 83682692 -11589959 + MTC-int LTR MaLR 1085 1258 0 3 1223 1705 178 113 33 chr17 83682692 83683082 -11589569 + MTC LTR MaLR 1 421 0 3 1223 544 247 169 33 chr17 83683092 83683267 -11589384 + Lx9 LINE L1 7369 7567 -77 3 1223 321 26 0 0 chr17 83683267 83683305 -11589346 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1223 544 247 169 33 chr17 83683305 83683372 -11589279 + Lx9 LINE L1 7568 7644 0 3 1223 218 169 67 202 chr17 83683470 83683559 -11589092 + B4 SINE B4 4 80 -212 3 1223 488 255 20 0 chr17 83683526 83683624 -11589027 + RSINE1 SINE B4 49 148 -17 3 1223 285 75 0 0 chr17 83683624 83683664 -11588987 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1223 498 282 58 12 chr17 83684499 83684671 -11587980 - Lx8 LINE L1 -136 7337 7158 3 1223 645 289 228 30 chr17 83685133 83685924 -11586727 + L2 LINE L2 268 1214 -2205 3 1223 315 116 94 32 chr17 83685935 83686009 -11586642 + MTC LTR MaLR 274 421 0 3 1223 768 235 102 5 chr17 83686009 83686206 -11586445 + ID_B1 SINE B4 5 220 -4 3 1223 216 0 0 0 chr17 83686291 83686315 -11586336 + (CAA)n Simple_repeat Simple_repeat 2 25 0 3 1223 1148 55 0 20 chr17 83686317 83686465 -11586186 + B1_Mus2 SINE Alu 2 146 -1 3 1223 1018 240 24 0 chr17 83686481 83686689 -11585962 - B3 SINE B2 -3 213 1 3 1223 514 278 0 9 chr17 83687270 83687379 -11585272 - B1F2 SINE Alu -36 113 6 3 1223 297 270 0 51 chr17 83687324 83687402 -11585249 - B4A SINE B4 -147 145 72 3 1223 234 0 0 0 chr17 83687823 83687849 -11584802 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1223 1123 152 76 5 chr17 83689068 83689279 -11583372 - URR1A DNA MER1_type 0 226 1 3 1223 570 237 51 15 chr17 83689330 83689467 -11583184 - ID_B1 SINE B4 -2 222 81 3 1223 665 170 0 0 chr17 83689507 83689613 -11583038 + B3 SINE B2 15 120 -96 3 1223 684 262 12 0 chr17 83690204 83690372 -11582279 - Lx7 LINE L1 -374 7322 7153 3 1223 237 214 0 0 chr17 83690949 83690991 -11581660 + polypurine Low_complexity Low_complexity 6 47 0 3 1223 290 239 316 9 chr17 83691065 83691179 -11581472 + MIRb SINE MIR 79 227 -41 3 1223 198 0 0 0 chr17 83691203 83691225 -11581426 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 3 1223 861 125 7 0 chr17 83691279 83691415 -11581236 - B1_Mur3 SINE Alu -1 148 12 3 1223 483 210 43 153 chr17 83691424 83691520 -11581131 - B1_Mur1 SINE Alu 0 149 67 3 1223 1250 41 0 7 chr17 83691520 83691667 -11580984 + B1_Mm SINE Alu 2 147 0 3 1223 483 210 43 153 chr17 83691667 83691733 -11580918 - B1_Mur1 SINE Alu -83 66 5 3 1223 800 157 0 7 chr17 83692053 83692201 -11580450 + GA-rich Low_complexity Low_complexity 3 149 0 3 1223 195 167 0 0 chr17 83692712 83692754 -11579897 + T-rich Low_complexity Low_complexity 1 42 0 3 1223 216 86 0 0 chr17 83692793 83692828 -11579823 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3 1223 1203 180 0 15 chr17 83692830 83693033 -11579618 - B3 SINE B2 -15 201 2 3 1223 606 272 86 6 chr17 83693036 83693145 -11579506 + B3 SINE B2 28 145 -71 3 1223 1070 122 0 0 chr17 83693145 83693292 -11579359 + B1_Mus1 SINE Alu 2 148 0 3 1223 606 272 86 6 chr17 83693292 83693356 -11579295 + B3 SINE B2 146 215 -1 3 1223 1149 110 0 0 chr17 83693442 83693763 -11578888 + (TG)n Simple_repeat Simple_repeat 1 321 0 3 1223 381 22 0 0 chr17 83694270 83694316 -11578335 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1223 869 252 18 90 chr17 83694373 83694402 -11578249 - B4A SINE B4 -1 291 271 3 1223 468 0 0 0 chr17 83694402 83694454 -11578197 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1223 869 252 18 90 chr17 83694454 83694703 -11577948 - B4A SINE B4 -22 270 33 3 1223 288 77 0 0 chr17 83695702 83695741 -11576910 + (TCTG)n Simple_repeat Simple_repeat 4 42 0 3 1223 354 300 71 48 chr17 83695753 83695879 -11576772 - B4A SINE B4 -40 252 124 3 1223 1139 85 95 11 chr17 83695890 83696069 -11576582 - B2_Mm2 SINE B2 -1 194 1 3 1223 359 304 80 39 chr17 83696132 83696485 -11576166 - L1MB8 LINE L1 -181 5998 5645 3 1223 4560 152 94 23 chr17 83696485 83697297 -11575354 + RMER19B LTR ERVK 1 878 -24 3 1223 1122 101 107 0 chr17 83697297 83697465 -11575186 + B2_Mm2 SINE B2 1 186 -9 3 1223 4560 152 94 23 chr17 83697465 83697488 -11575163 + RMER19B LTR ERVK 879 896 -6 3 1223 901 171 0 14 chr17 83697540 83697688 -11574963 - B1_Mus1 SINE Alu -1 147 2 3 1223 431 160 39 29 chr17 83697690 83697793 -11574858 - L1MB8 LINE L1 -551 5613 5510 3 1223 860 159 22 50 chr17 83697827 83698006 -11574645 - B2_Mm2 SINE B2 -20 175 2 3 1223 2199 132 83 18 chr17 83698014 83698061 -11574590 - MTC LTR MaLR 0 421 375 3 1223 243 0 0 0 chr17 83698061 83698088 -11574563 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1223 2199 132 83 18 chr17 83698088 83698427 -11574224 - MTC LTR MaLR -47 374 12 3 1223 1440 75 43 0 chr17 83698659 83698845 -11573806 + B2_Mm2 SINE B2 2 195 0 3 1223 269 269 104 0 chr17 83698975 83699042 -11573609 - PB1D7 SINE Alu -46 74 1 3 1223 191 125 10 83 chr17 83699077 83699173 -11573478 + (TTTG)n Simple_repeat Simple_repeat 3 91 0 3 1223 674 131 9 0 chr17 83699173 83699280 -11573371 - B1_Mur3 SINE Alu 0 149 42 3 1223 1011 135 0 57 chr17 83699280 83699634 -11573017 + (TCTCTG)n Simple_repeat Simple_repeat 1 333 0 3 1223 253 267 0 32 chr17 83699636 83699698 -11572953 - B1_Mur4 SINE Alu -90 60 1 3 1223 732 221 0 20 chr17 83699714 83699862 -11572789 - ID_B1 SINE B4 0 224 80 3 1223 496 321 80 113 chr17 83699865 83700089 -11572562 - L1M4 LINE L1 -3114 3032 2841 3 1223 411 210 12 12 chr17 83700089 83700171 -11572480 - ID4_ SINE ID 0 83 2 3 1223 496 321 80 113 chr17 83700171 83700336 -11572315 - L1M4 LINE L1 -3306 2840 2656 3 1223 368 309 8 39 chr17 83700770 83700898 -11571753 + MER5B DNA MER1_type 54 177 -1 3 1223 244 174 15 104 chr17 83701605 83701740 -11570911 + (TTGTG)n Simple_repeat Simple_repeat 4 126 0 3 1223 310 285 8 8 chr17 83701693 83701770 -11570881 + (TG)n Simple_repeat Simple_repeat 1 78 0 3 1223 1166 241 111 0 chr17 83701770 83702031 -11570620 - B4A SINE B4 0 292 3 3 1223 310 285 8 8 chr17 83702031 83702077 -11570574 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1223 253 308 46 0 chr17 83702138 83702203 -11570448 + PB1D10 SINE Alu 37 104 -13 3 1223 993 272 162 12 chr17 83702433 83702761 -11569890 - MTE2a LTR MaLR -2 377 1 3 1223 339 370 80 27 chr17 83702870 83702899 -11569752 - B4A SINE B4 -133 159 131 3 1223 484 15 0 30 chr17 83702899 83702966 -11569685 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 1223 339 370 80 27 chr17 83702966 83703086 -11569565 - B4A SINE B4 -162 130 4 3 1223 310 289 60 30 chr17 83703145 83703245 -11569406 + PB1D10 SINE Alu 15 117 0 3 1223 305 59 0 38 chr17 83704307 83704360 -11568291 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 4 1223 827 152 35 0 chr17 83704365 83704510 -11568141 - B1_Mur4 SINE Alu 0 150 1 4 1223 402 240 94 0 chr17 83704570 83704666 -11567985 - RSINE1 SINE B4 -58 107 3 4 1223 21 0 0 0 chr17 83705341 83705362 -11567289 + AT_rich Low_complexity Low_complexity 1 21 0 4 1223 659 234 6 80 chr17 83705465 83705641 -11567010 + RSINE1 SINE B4 3 165 0 4 1223 741 203 0 17 chr17 83705644 83706132 -11566519 + (CA)n Simple_repeat Simple_repeat 1 479 0 4 1223 261 0 0 0 chr17 83707608 83707637 -11565014 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1223 477 244 77 23 chr17 83707637 83707767 -11564884 - RSINE1 SINE B4 -26 139 3 4 1223 850 261 205 24 chr17 83708043 83708370 -11564281 + MLT1D LTR MaLR 3 388 -117 4 1223 256 309 0 0 chr17 83708947 83709015 -11563636 - ID4_ SINE ID -13 70 3 4 1223 229 279 134 64 chr17 83709034 83709206 -11563445 - B3A SINE B2 -3 195 12 4 1223 702 178 60 27 chr17 83709060 83709210 -11563441 - RSINE1 SINE B4 -2 163 9 4 1223 1305 75 0 0 chr17 83709225 83709456 -11563195 + (TG)n Simple_repeat Simple_repeat 1 231 0 4 1223 478 202 29 48 chr17 83709457 83709561 -11563090 - B3A SINE B2 -96 102 1 4 1223 191 36 0 35 chr17 83709695 83709724 -11562927 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 4 1223 500 250 89 0 chr17 83709726 83709850 -11562801 - B1F1 SINE Alu -5 144 10 4 1223 519 265 29 43 chr17 83709927 83710065 -11562586 - RSINE1 SINE B4 -28 137 2 4 1223 389 360 87 18 chr17 83710305 83710534 -11562117 - MIRb SINE MIR -3 265 21 4 1223 981 138 14 0 chr17 83710651 83710796 -11561855 - B1_Mur4 SINE Alu -1 149 3 4 1223 225 0 0 0 chr17 83710834 83710859 -11561792 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1223 329 315 0 22 chr17 83711442 83711533 -11561118 - L1MEg LINE L1 -4114 1970 1882 4 1223 387 0 0 0 chr17 83712343 83712386 -11560265 + (TAA)n Simple_repeat Simple_repeat 3 45 0 4 1223 688 323 78 64 chr17 83713026 83713370 -11559281 + ORR1E LTR MaLR 8 356 -3 4 1223 301 302 71 136 chr17 83713430 83713614 -11559037 + ID_B1 SINE B4 50 221 -3 4 1223 334 288 57 10 chr17 83713787 83713901 -11558750 - MLT1A1 LTR MaLR -247 118 1 4 1223 241 369 57 8 chr17 83714013 83714136 -11558515 + MER20B DNA MER1_type 29 157 -626 4 1223 353 197 66 0 chr17 83714121 83714197 -11558454 + B1_Mur3 SINE Alu 49 129 -20 4 1223 1228 61 0 0 chr17 83714240 83714388 -11558263 + B1_Mus1 SINE Alu 1 148 0 4 1223 603 27 0 0 chr17 83714505 83714578 -11558073 + (TG)n Simple_repeat Simple_repeat 2 74 0 4 1223 524 290 0 70 chr17 83714579 83714735 -11557916 - RSINE1 SINE B4 -17 148 4 4 1223 348 369 42 81 chr17 83714745 83715105 -11557546 - L4 LINE RTE -86 1943 1598 4 1223 337 326 44 15 chr17 83715347 83715484 -11557167 - ID_B1 SINE B4 0 224 84 4 1223 180 0 0 0 chr17 83715485 83715505 -11557146 + (GTTTG)n Simple_repeat Simple_repeat 2 21 0 4 1223 207 0 0 0 chr17 83715557 83715580 -11557071 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1223 543 242 74 8 chr17 83715581 83715702 -11556949 - B1_Mus2 SINE Alu -10 137 9 4 1223 186 43 0 0 chr17 83716524 83716547 -11556104 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 4 1223 1474 75 32 0 chr17 83716551 83716738 -11555913 - B2_Mm2 SINE B2 -2 193 1 4 1223 558 268 70 35 chr17 83717514 83717657 -11554994 + RSINE1 SINE B4 3 150 -15 4 1223 387 0 0 0 chr17 83717730 83717773 -11554878 + (CTTG)n Simple_repeat Simple_repeat 4 46 0 4 1223 195 100 0 0 chr17 83717777 83717807 -11554844 + (TTG)n Simple_repeat Simple_repeat 1 30 0 4 1223 590 251 0 12 chr17 83717808 83717969 -11554682 - HAL1-2a_MD LINE L1 -519 2505 2347 4 1223 1062 140 0 0 chr17 83717979 83718158 -11554493 + (CTG)n Simple_repeat Simple_repeat 1 179 0 4 1223 429 188 0 0 chr17 83718158 83718243 -11554408 + (TTG)n Simple_repeat Simple_repeat 3 87 0 4 1223 366 310 15 8 chr17 83718243 83718373 -11554278 - HAL1-2a_MD LINE L1 -519 2505 2375 4 1223 908 251 58 5 chr17 83718375 83718583 -11554068 - ID_B1 SINE B4 0 224 6 4 1223 776 239 7 0 chr17 83718587 83718742 -11553909 - ID_B1 SINE B4 -68 156 1 4 1223 226 267 167 0 chr17 83718772 83718862 -11553789 + MLT1N2 LTR MaLR 452 556 -6 4 1223 781 136 72 0 chr17 83719121 83719246 -11553405 + B1_Mur4 SINE Alu 1 134 -16 4 1223 264 122 0 0 chr17 83719264 83719305 -11553346 + (TAA)n Simple_repeat Simple_repeat 3 43 0 4 1223 2092 125 25 13 chr17 83719310 83719627 -11553024 + ORR1A4 LTR MaLR 9 329 0 4 1223 479 361 124 28 chr17 83719772 83720094 -11552557 - L4 LINE RTE -585 1444 1092 4 1223 247 289 57 76 chr17 83720248 83720353 -11552298 - PB1D10 SINE Alu 0 117 15 4 1223 815 200 0 15 chr17 83720423 83720560 -11552091 - B1_Mus2 SINE Alu -12 135 1 4 1223 518 264 88 0 chr17 83720619 83720744 -11551907 - RSINE1 SINE B4 -29 136 1 4 1223 1502 52 10 10 chr17 83720784 83720978 -11551673 - B2_Mm2 SINE B2 0 195 2 4 1223 1618 48 0 0 chr17 83721170 83721359 -11551292 + B2_Mm1a SINE B2 2 190 -3 4 1223 488 238 158 122 chr17 83725017 83725213 -11547438 + B4A SINE B4 5 220 -72 4 1223 339 203 12 60 chr17 83725213 83725297 -11547354 + ID4_ SINE ID 4 83 0 4 1223 488 238 158 122 chr17 83725297 83725378 -11547273 + B4A SINE B4 221 292 0 4 1223 388 212 12 0 chr17 83725428 83725508 -11547143 - ID2 SINE ID 0 83 3 4 1223 722 212 14 14 chr17 83725564 83725712 -11546939 + B1_Mur2 SINE Alu 2 149 0 4 1223 208 394 61 25 chr17 83725723 83725921 -11546730 - MIR SINE MIR -44 218 14 4 1223 1034 107 6 0 chr17 83726401 83726560 -11546091 + (TTCC)n Simple_repeat Simple_repeat 2 161 0 4 1223 238 50 0 48 chr17 83726582 83726624 -11546027 + (TTTTG)n Simple_repeat Simple_repeat 4 43 0 4 1223 702 245 77 24 chr17 83726626 83726835 -11545816 - ID_B1 SINE B4 -3 221 2 4 1223 300 341 91 30 chr17 83726894 83727124 -11545527 + MIR SINE MIR 9 252 -10 4 1223 1952 163 23 23 chr17 83727151 83727535 -11545116 + ORR1C2 LTR MaLR 1 384 0 4 1223 204 237 0 0 chr17 83727577 83727615 -11545036 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 4 1223 758 243 89 11 chr17 83727655 83727680 -11544971 - B3 SINE B2 -9 207 180 4 1223 255 61 0 0 chr17 83727680 83727713 -11544938 + (TATG)n Simple_repeat Simple_repeat 2 34 0 4 1223 758 243 89 11 chr17 83727713 83727878 -11544773 - B3 SINE B2 -37 179 2 4 1223 337 211 0 84 chr17 83728119 83728202 -11544449 - LSU-rRNA_Hsa rRNA rRNA -490 4545 4470 4 1223 202 262 12 48 chr17 83728225 83728309 -11544342 - MIR SINE MIR -96 166 86 4 1223 207 0 0 0 chr17 83728351 83728374 -11544277 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 4 1223 461 209 9 19 chr17 83728487 83728594 -11544057 - PB1D9 SINE Alu -5 115 10 4 1223 573 88 0 0 chr17 83729352 83729432 -11543219 + (GAAAA)n Simple_repeat Simple_repeat 4 83 0 4 1223 389 109 16 0 chr17 83729422 83729486 -11543165 + (GGAA)n Simple_repeat Simple_repeat 3 67 0 4 1223 1068 141 0 0 chr17 83729486 83729663 -11542988 + (GA)n Simple_repeat Simple_repeat 2 178 0 4 1223 471 282 0 8 chr17 83730440 83730558 -11542093 + ID_B1 SINE B4 88 204 -20 4 1223 303 303 74 0 chr17 83730451 83730573 -11542078 + B1F SINE Alu 18 148 -1 4 1223 248 359 104 0 chr17 83730620 83730726 -11541925 + MLT1M LTR MaLR 70 186 -486 4 1223 207 0 0 0 chr17 83730808 83730831 -11541820 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 4 1223 318 160 33 20 chr17 83730831 83730931 -11541720 - B2_Mm2 SINE B2 -15 180 47 4 1223 1270 102 11 0 chr17 83730982 83731159 -11541492 - B2_Mm1t SINE B2 -14 179 1 4 1223 516 313 7 7 chr17 83731248 83731399 -11541252 - RSINE1 SINE B4 -5 160 10 4 1223 262 290 32 0 chr17 83731819 83731881 -11540770 - ID4_ SINE ID -6 77 14 4 1223 233 191 191 0 chr17 83732095 83732163 -11540488 + PB1D7 SINE Alu 14 94 -26 4 1223 201 74 0 0 chr17 83732242 83732269 -11540382 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 4 1223 544 239 75 0 chr17 83732274 83732408 -11540243 + B1_Mur3 SINE Alu 6 149 0 4 1223 635 154 8 0 chr17 83732408 83732525 -11540126 + GA-rich Low_complexity Low_complexity 4 121 0 4 1223 328 179 81 75 chr17 83732617 83732753 -11539898 + L1M5 LINE L1 5586 5747 -415 4 1223 216 0 0 0 chr17 83732753 83732777 -11539874 + (CTG)n Simple_repeat Simple_repeat 3 26 0 4 1223 328 180 47 95 chr17 83732777 83732802 -11539849 + L1M5 LINE L1 5748 5778 -384 4 1223 682 225 67 39 chr17 83732800 83733008 -11539643 + L1MB8 LINE L1 5912 6125 -53 4 1223 872 211 13 67 chr17 83733388 83733612 -11539039 + ID_B1 SINE B4 1 212 -12 4 1223 338 259 23 23 chr17 83733641 83733728 -11538923 - B1_Mur3 SINE Alu -54 95 9 4 1223 1104 147 33 107 chr17 83733928 83734024 -11538627 - URR1A DNA MER1_type 0 226 146 4 1223 333 0 0 0 chr17 83734024 83734061 -11538590 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 4 1223 1092 51 0 7 chr17 83734061 83734199 -11538452 - B1_Mus1 SINE Alu -11 137 1 4 1223 1104 147 33 107 chr17 83734199 83734345 -11538306 - URR1A DNA MER1_type -81 145 2 4 1223 436 323 65 0 chr17 83734349 83734473 -11538178 + B3A SINE B2 48 179 -19 4 1223 180 0 0 0 chr17 83734998 83735018 -11537633 + (C)n Simple_repeat Simple_repeat 1 20 0 4 1223 491 306 15 7 chr17 83735080 83735215 -11537436 - ID_B1 SINE B4 -7 217 82 4 1223 187 106 20 41 chr17 83735254 83735303 -11537348 + T-rich Low_complexity Low_complexity 5 52 0 4 1223 1070 129 0 0 chr17 83735304 83735451 -11537200 - B1_Mur3 SINE Alu -1 148 2 5 1223 726 220 19 13 chr17 83736038 83736206 -11536445 + B3 SINE B2 1 167 -49 5 1223 189 74 0 0 chr17 83736206 83736233 -11536418 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1223 446 233 55 104 chr17 83736233 83736265 -11536386 + B2_Mm2 SINE B2 158 191 -4 5 1223 1256 40 0 0 chr17 83736321 83736469 -11536182 - B1_Mus1 SINE Alu 0 148 1 5 1223 391 231 11 11 chr17 83736471 83736563 -11536088 - PB1D10 SINE Alu 0 117 26 5 1223 288 0 0 0 chr17 83736570 83736602 -11536049 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 1223 513 0 0 0 chr17 83736603 83736660 -11535991 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 1223 627 146 146 0 chr17 83736660 83736797 -11535854 - B3 SINE B2 -58 158 2 5 1223 752 241 101 52 chr17 83736970 83737277 -11535374 - L1MC1 LINE L1 -180 6153 5832 5 1223 739 277 24 14 chr17 83737576 83737785 -11534866 - ID_B1 SINE B4 -7 217 7 5 1223 335 229 156 78 chr17 83737804 83737934 -11534717 - L1MC1 LINE L1 -481 5852 5706 5 1223 997 67 30 7 chr17 83737934 83738069 -11534582 + B1_Mm SINE Alu 1 138 -9 5 1223 192 40 0 0 chr17 83738069 83738094 -11534557 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 5 1223 335 229 156 78 chr17 83738094 83738142 -11534509 - L1MC1 LINE L1 -628 5705 5660 5 1223 760 243 0 0 chr17 83738621 83738769 -11533882 + B1_Mur4 SINE Alu 1 148 -2 5 1223 215 73 0 47 chr17 83739457 83739500 -11533151 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 5 1223 218 235 146 12 chr17 83739581 83739663 -11532988 + B4 SINE B4 1 93 -199 5 1223 243 0 0 0 chr17 83739749 83739776 -11532875 + (GGGA)n Simple_repeat Simple_repeat 4 30 0 5 1223 957 144 199 6 chr17 83739842 83740023 -11532628 + B3 SINE B2 1 216 0 5 1223 366 256 0 0 chr17 83740336 83740418 -11532233 - MLT1N2 LTR MaLR -10 552 471 5 1223 184 339 0 0 chr17 83741142 83741198 -11531453 + MIRb SINE MIR 15 70 -198 5 1223 305 259 194 0 chr17 83741499 83741607 -11531044 - MamRep1161 DNA TcMar -828 129 1 5 1223 269 82 0 20 chr17 83742044 83742094 -11530557 + (CCCCCA)n Simple_repeat Simple_repeat 4 52 0 5 1223 210 143 0 45 chr17 83742252 83742296 -11530355 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 5 1223 821 147 16 0 chr17 83742296 83742425 -11530226 - B1_Mur4 SINE Alu -19 131 1 5 1223 526 296 7 0 chr17 83742759 83742894 -11529757 + ID_B1 SINE B4 82 217 -7 5 1223 1355 57 9 9 chr17 83742897 83743130 -11529521 + (GAAA)n Simple_repeat Simple_repeat 1 233 0 5 1223 570 248 47 7 chr17 83743246 83743396 -11529255 + RSINE1 SINE B4 10 165 0 5 1223 208 355 76 29 chr17 83743914 83744085 -11528566 - MIR SINE MIR -43 219 41 5 1223 3865 20 2 0 chr17 83744316 83744754 -11527897 - L1Md_F3 LINE L1 -16 6568 6130 5 1223 306 224 124 67 chr17 83744772 83744877 -11527774 - ID_B1 SINE B4 -109 115 5 5 1223 725 180 2 21 chr17 83744928 83745073 -11527578 - B1_Mur1 SINE Alu 0 149 16 5 1223 528 254 0 104 chr17 83745124 83745278 -11527373 - B4 SINE B4 -140 152 15 5 1223 2105 35 24 0 chr17 83745323 83745578 -11527073 - RLTR10-int LTR ERVK -1686 301 41 5 1223 3319 28 3 5 chr17 83745590 83745979 -11526672 - RLTR10 LTR ERVK -2 388 1 5 1223 1922 233 202 28 chr17 83746024 83746676 -11525975 - RMER13A LTR ERVK -94 766 1 5 1223 294 168 0 125 chr17 83746699 83746883 -11525768 + (CCCTA)n Simple_repeat Simple_repeat 3 163 0 5 1223 210 128 0 0 chr17 83747251 83747290 -11525361 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 5 1223 435 296 8 0 chr17 83747467 83747592 -11525059 - ID_B1 SINE B4 -15 209 84 5 1223 1246 333 77 24 chr17 83747673 83748218 -11524433 + Arthur1 DNA Tip100 174 747 -3200 5 1223 700 144 34 11 chr17 83748253 83748428 -11524223 + (TA)n Simple_repeat Simple_repeat 2 180 0 5 1223 450 276 199 0 chr17 83748574 83748755 -11523896 - B4 SINE B4 -2 290 74 5 1223 267 323 21 0 chr17 83748855 83748948 -11523703 - BC1_Mm scRNA scRNA -57 95 1 5 1223 851 92 245 13 chr17 83749281 83749436 -11523215 + B2_Mm2 SINE B2 2 192 -3 5 1223 237 33 0 0 chr17 83750267 83750297 -11522354 + (CGCGG)n Simple_repeat Simple_repeat 3 32 0 5 1223 204 40 0 0 chr17 83750314 83750339 -11522312 + (GA)n Simple_repeat Simple_repeat 1 25 0 5 1223 23 0 0 0 chr17 83750635 83750658 -11521993 + GC_rich Low_complexity Low_complexity 1 23 0 5 1223 183 42 0 0 chr17 83753526 83753550 -11519101 + (TTGTG)n Simple_repeat Simple_repeat 4 27 0 5 1223 342 212 24 24 chr17 83753585 83753667 -11518984 - PB1D10 SINE Alu -10 107 26 5 1223 314 236 69 0 chr17 83753921 83753993 -11518658 - ID SINE ID -144 80 4 5 1223 357 305 78 0 chr17 83754037 83754165 -11518486 - ID_B1 SINE B4 0 224 87 5 1223 422 304 0 25 chr17 83754193 83754311 -11518340 - PB1 SINE Alu -7 120 6 5 1223 279 0 0 0 chr17 83754375 83754406 -11518245 + (T)n Simple_repeat Simple_repeat 1 31 0 5 1223 281 298 135 0 chr17 83754488 83754592 -11518059 + B4A SINE B4 1 118 -174 5 1223 226 339 0 0 chr17 83754620 83754685 -11517966 + B4A SINE B4 226 290 -2 5 1224 474 114 0 0 chr17 83756045 83756124 -11516527 + (CTA)n Simple_repeat Simple_repeat 2 80 0 5 1224 189 0 0 0 chr17 83756124 83756145 -11516506 + (TTC)n Simple_repeat Simple_repeat 3 23 0 5 1224 1393 81 43 0 chr17 83756145 83756330 -11516321 - B2_Mm2 SINE B2 0 195 3 5 1224 687 269 4 122 chr17 83756365 83756602 -11516049 - ID_B1 SINE B4 -13 211 3 5 1224 540 182 123 31 chr17 83756651 83756781 -11515870 - B1_Mm SINE Alu -3 144 3 5 1224 623 266 29 17 chr17 83757405 83757577 -11515074 - B3A SINE B2 -24 174 1 5 1224 260 303 34 1 chr17 83757882 83757980 -11514671 + L1MC4 LINE L1 7217 7334 -708 5 1224 261 0 0 0 chr17 83758057 83758086 -11514565 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1224 374 322 48 32 chr17 83758159 83758345 -11514306 + L1MC4 LINE L1 7692 7880 -162 5 1224 229 256 186 0 chr17 83758345 83758431 -11514220 - B1F SINE Alu -6 143 42 5 1224 1357 87 11 11 chr17 83758692 83758878 -11513773 + B2_Mm2 SINE B2 2 187 -8 5 1224 706 218 48 0 chr17 83759144 83759291 -11513360 + B3 SINE B2 2 155 -61 5 1224 311 239 73 42 chr17 83759406 83759502 -11513149 - L1MC4 LINE L1 -1163 6879 6781 5 1224 314 216 211 22 chr17 83759924 83760014 -11512637 - PB1D10 SINE Alu -8 109 3 5 1224 258 56 0 0 chr17 83760014 83760050 -11512601 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 5 1224 516 111 0 0 chr17 83760196 83760277 -11512374 + (TG)n Simple_repeat Simple_repeat 1 81 0 5 1224 251 311 56 0 chr17 83760303 83760393 -11512258 - Lx8 LINE L1 -201 7272 7178 5 1224 1877 279 126 24 chr17 83760409 83761148 -11511503 - Lx8 LINE L1 -361 7112 6299 5 1224 501 276 8 52 chr17 83761297 83761431 -11511220 - RSINE1 SINE B4 -29 136 9 5 1224 687 250 65 40 chr17 83761437 83761637 -11511014 - B4A SINE B4 -73 219 15 5 1224 222 91 0 0 chr17 83761653 83761686 -11510965 + (CCTG)n Simple_repeat Simple_repeat 2 34 0 5 1224 180 0 0 0 chr17 83762109 83762129 -11510522 + (TA)n Simple_repeat Simple_repeat 1 20 0 5 1224 895 84 184 25 chr17 83762129 83762277 -11510374 - B2_Mm1t SINE B2 -16 177 1 5 1224 413 0 0 37 chr17 83762291 83762345 -11510306 + (CAAAA)n Simple_repeat Simple_repeat 3 54 0 5 1224 1084 200 194 13 chr17 83762413 83762712 -11509939 + ORR1D2 LTR MaLR 5 357 -13 5 1224 1209 62 0 0 chr17 83763280 83763426 -11509225 - B1_Mus2 SINE Alu 0 147 2 5 1224 671 41 0 0 chr17 83763517 83763615 -11509036 - L1Md_F3 LINE L1 0 6584 6487 5 1224 755 167 148 51 chr17 83763917 83764113 -11508538 + URR1A DNA MER1_type 1 215 -11 5 1224 429 135 0 0 chr17 83764110 83764184 -11508467 - URR1A DNA MER1_type -80 146 73 5 1224 207 0 0 0 chr17 83764261 83764284 -11508367 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1224 1167 55 0 0 chr17 83764284 83764429 -11508222 - B1_Mus2 SINE Alu 0 147 3 5 1224 230 259 0 0 chr17 83765176 83765230 -11507421 - L2a LINE L2 -4 3422 3369 5 1224 290 275 132 0 chr17 83766299 83766390 -11506261 - L2a LINE L2 -43 3383 3281 5 1224 557 229 71 76 chr17 83767874 83768072 -11504579 - B3A SINE B2 0 198 2 5 1224 252 100 0 0 chr17 83768091 83768131 -11504520 + (TCTG)n Simple_repeat Simple_repeat 3 42 0 5 1224 532 241 28 57 chr17 83768145 83768286 -11504365 - RSINE1 SINE B4 -22 143 7 5 1224 315 178 109 22 chr17 83768281 83768373 -11504278 - B1F1 SINE Alu -49 100 1 5 1224 239 259 89 65 chr17 83768546 83768593 -11504058 + MER58C DNA MER1_type 3 49 -166 5 1224 450 0 0 0 chr17 83768593 83768643 -11504008 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1224 331 257 27 0 chr17 83768643 83768717 -11503934 - ID2 SINE ID -6 77 2 5 1224 338 268 132 59 chr17 83768717 83768926 -11503725 + MER58B DNA MER1_type 50 285 -56 5 1224 355 272 93 22 chr17 83768980 83769002 -11503649 + B1F2 SINE Alu 1 22 -127 5 1224 1140 122 11 22 chr17 83769002 83769187 -11503464 - B2_Mm1a SINE B2 -10 183 1 5 1224 372 240 209 1 chr17 83769187 83769303 -11503348 + B1_Mur1 SINE Alu 13 149 0 5 1224 427 252 161 58 chr17 83769685 83769927 -11502724 - L1M2 LINE L1 -1472 4671 4406 5 1224 441 0 0 0 chr17 83769927 83769976 -11502675 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1224 427 252 161 58 chr17 83769976 83770163 -11502488 - L1M2 LINE L1 -1738 4405 4199 5 1224 673 266 143 34 chr17 83770293 83770860 -11501791 - L1M2 LINE L1 -2715 3428 2800 5 1224 1176 192 142 19 chr17 83770932 83771250 -11501401 - ORR1D2 LTR MaLR -13 357 1 5 1224 439 233 58 10 chr17 83771256 83771360 -11501291 - L1M2 LINE L1 -3449 2694 2586 5 1224 426 65 0 0 chr17 83771483 83771545 -11501106 + (TG)n Simple_repeat Simple_repeat 1 62 0 5 1224 812 181 227 6 chr17 83771572 83771744 -11500907 + B3 SINE B2 2 211 -5 5 1224 205 138 0 0 chr17 83771761 83771790 -11500861 + (GAA)n Simple_repeat Simple_repeat 2 30 0 5 1224 1027 242 81 113 chr17 83771951 83772042 -11500609 - RLTR16 LTR ERVK 0 505 413 5 1224 216 86 0 0 chr17 83772042 83772077 -11500574 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1224 1027 242 81 113 chr17 83772077 83772507 -11500144 - RLTR16 LTR ERVK -93 412 1 5 1224 287 280 50 8 chr17 83772507 83772626 -11500025 + L1M3e LINE L1 1959 2082 -4948 5 1224 1632 16 27 0 chr17 83773210 83773395 -11499256 + B2_Mm1a SINE B2 2 191 -2 5 1224 235 278 0 0 chr17 83773455 83773509 -11499142 + G-rich Low_complexity Low_complexity 5 58 0 6 1224 31 44 0 0 chr17 83773838 83773883 -11498768 + AT_rich Low_complexity Low_complexity 1 45 0 6 1224 564 70 0 75 chr17 83773901 83773994 -11498657 - B1_Mus1 SINE Alu -62 86 1 6 1224 836 175 14 14 chr17 83774324 83774469 -11498182 + B1_Mur3 SINE Alu 1 145 -4 6 1224 393 149 0 0 chr17 83774471 83774538 -11498113 + (TAGA)n Simple_repeat Simple_repeat 1 67 0 6 1224 442 177 149 9 chr17 83774554 83774668 -11497983 + RSINE1 SINE B4 12 141 -24 6 1224 24 32 0 0 chr17 83774732 83774763 -11497888 + AT_rich Low_complexity Low_complexity 1 31 0 6 1224 382 342 0 0 chr17 83774967 83775084 -11497567 - PB1D10 SINE Alu 0 117 1 6 1224 225 159 136 0 chr17 83775322 83775366 -11497285 - BC1_Mm scRNA scRNA -102 50 1 6 1224 572 243 7 254 chr17 83775710 83775997 -11496654 - B3 SINE B2 0 216 1 6 1224 825 224 52 24 chr17 83776761 83776971 -11495680 + ID_B1 SINE B4 1 216 -8 6 1224 665 257 54 0 chr17 83778850 83778998 -11493653 - RSINE1 SINE B4 -4 161 6 6 1224 682 201 175 22 chr17 83779868 83780051 -11492600 + B3 SINE B2 3 213 -3 6 1224 292 345 100 7 chr17 83780098 83780238 -11492413 - MER58B DNA MER1_type -179 162 10 6 1224 445 226 48 0 chr17 83780484 83780568 -11492083 - PB1D10 SINE Alu -28 89 2 6 1224 258 293 103 58 chr17 83780568 83780613 -11492038 - B4 SINE B4 -206 86 38 6 1224 543 16 0 0 chr17 83780627 83780691 -11491960 + (TCTA)n Simple_repeat Simple_repeat 2 65 0 6 1224 454 250 35 9 chr17 83780696 83780809 -11491842 - B3A SINE B2 -45 153 38 6 1224 293 238 67 29 chr17 83780812 83780916 -11491735 - PB1D7 SINE Alu -12 108 1 6 1224 289 253 103 13 chr17 83782106 83782262 -11490389 - L1MC4 LINE L1 -6 8036 7867 6 1224 975 234 31 15 chr17 83782424 83782619 -11490032 - B3 SINE B2 -4 212 15 6 1224 355 114 88 12 chr17 83782720 83782800 -11489851 - Lx2A1 LINE L1 -25 6983 6898 6 1224 27 0 0 0 chr17 83782800 83782827 -11489824 + AT_rich Low_complexity Low_complexity 1 27 0 6 1224 242 221 94 10 chr17 83782932 83783028 -11489623 + Lx9 LINE L1 7395 7498 -146 6 1224 288 215 75 12 chr17 83783177 83783257 -11489394 - L1MC4 LINE L1 -494 7548 7464 6 1224 314 23 0 23 chr17 83783664 83783708 -11488943 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 6 1224 749 172 30 0 chr17 83783708 83783842 -11488809 - B1_Mus1 SINE Alu -9 139 2 6 1224 357 62 0 0 chr17 83784089 83784137 -11488514 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 6 1224 861 214 31 9 chr17 83784150 83784379 -11488272 - Lx4B LINE L1 -111 6947 6723 6 1224 582 311 77 6 chr17 83784497 83784665 -11487986 + B4A SINE B4 111 290 -2 6 1224 317 265 15 0 chr17 83785663 83785731 -11486920 + B1F1 SINE Alu 2 70 -79 6 1224 1102 243 143 34 chr17 83785886 83786235 -11486416 + MTD LTR MaLR 33 419 0 6 1224 619 223 34 48 chr17 83786298 83786444 -11486207 + RSINE1 SINE B4 1 144 -21 6 1224 761 262 15 15 chr17 83786618 83786816 -11485835 - B3 SINE B2 -17 199 2 6 1224 1054 52 44 0 chr17 83787048 83787184 -11485467 - B1_Mus2 SINE Alu -5 142 1 6 1224 996 117 7 0 chr17 83787254 83787399 -11485252 + B2_Mm1t SINE B2 15 160 -33 6 1224 270 0 0 0 chr17 83787399 83787429 -11485222 + (GA)n Simple_repeat Simple_repeat 1 30 0 6 1224 201 74 0 0 chr17 83787712 83787739 -11484912 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 6 1224 201 147 0 0 chr17 83788114 83788148 -11484503 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 6 1224 645 244 39 24 chr17 83788223 83788429 -11484222 + L1M2 LINE L1 5558 5766 -534 6 1224 431 300 35 35 chr17 83789266 83789380 -11483271 - RSINE1 SINE B4 -51 114 1 6 1224 487 210 40 0 chr17 83789845 83789945 -11482706 - B3 SINE B2 0 216 113 6 1224 221 290 42 28 chr17 83790326 83790397 -11482254 - B1_Mus2 SINE Alu -65 82 11 6 1224 1064 194 44 0 chr17 83790481 83790687 -11481964 + B3 SINE B2 2 216 0 6 1224 1137 274 108 53 chr17 83790760 83791288 -11481363 - Lx8 LINE L1 -708 6765 6209 6 1224 432 0 0 0 chr17 83791309 83791357 -11481294 + (TC)n Simple_repeat Simple_repeat 1 48 0 6 1224 702 199 13 27 chr17 83791386 83791536 -11481115 - B1_Mur3 SINE Alu 0 149 2 6 1224 21 0 0 0 chr17 83791727 83791748 -11480903 + AT_rich Low_complexity Low_complexity 1 21 0 6 1224 716 203 36 7 chr17 83791749 83791888 -11480763 + B1_Mur1 SINE Alu 1 143 -6 6 1224 207 136 22 22 chr17 83791916 83791961 -11480690 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 6 1224 378 261 34 34 chr17 83792816 83792935 -11479716 - MER2 DNA MER2_type -140 205 87 6 1224 833 182 0 14 chr17 83793620 83793765 -11478886 + B1_Mur3 SINE Alu 6 148 -1 6 1224 537 282 93 33 chr17 83794010 83794281 -11478370 + MTD LTR MaLR 1 323 -56 6 1224 366 42 0 0 chr17 83794475 83794523 -11478128 + (CAGG)n Simple_repeat Simple_repeat 2 49 0 6 1224 1059 258 65 41 chr17 83794846 83795137 -11477514 - MTEa LTR MaLR -40 339 42 6 1224 392 292 6 51 chr17 83795177 83795354 -11477297 + CT-rich Low_complexity Low_complexity 5 173 0 6 1224 884 172 25 51 chr17 83797820 83798016 -11474635 - B2_Mm2 SINE B2 -4 191 1 6 1224 779 165 103 0 chr17 83798123 83798382 -11474269 - ORR1C2 LTR MaLR -8 376 4 6 1224 815 98 147 0 chr17 83798644 83798787 -11473864 - B2_Mm2 SINE B2 -1 194 31 6 1224 596 14 14 0 chr17 83798787 83798860 -11473791 + (TG)n Simple_repeat Simple_repeat 1 74 0 6 1224 1490 232 139 61 chr17 83799304 83799859 -11472792 - RLTR18 LTR ERVK -4 612 15 6 1224 819 159 26 40 chr17 83799895 83800046 -11472605 + B1_Mur4 SINE Alu 2 150 0 6 1224 447 229 12 12 chr17 83800445 83800529 -11472122 + B1_Mus1 SINE Alu 1 84 -64 6 1224 261 0 0 0 chr17 83801570 83801599 -11471052 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1224 1277 2 44 0 chr17 83802021 83802570 -11470081 + (CCTG)n Simple_repeat Simple_repeat 1 573 0 6 1224 653 193 94 22 chr17 83802850 83803030 -11469621 + B2_Mm2 SINE B2 2 194 -1 6 1224 740 192 27 0 chr17 83803037 83803183 -11469468 + B1_Mur4 SINE Alu 1 150 0 6 1224 1010 168 119 21 chr17 83803221 83803415 -11469236 + B3 SINE B2 1 213 -3 6 1224 445 207 10 45 chr17 83803991 83804112 -11468539 + B1_Mur2 SINE Alu 2 115 -5 6 1224 242 295 76 63 chr17 83804921 83805051 -11467600 + MIRm SINE MIR 76 199 -9 6 1224 296 226 15 46 chr17 83805277 83805342 -11467309 - RSINE1 SINE B4 -21 144 82 6 1224 249 57 0 0 chr17 83805487 83805522 -11467129 + (TTGG)n Simple_repeat Simple_repeat 1 35 0 6 1224 1125 49 0 34 chr17 83805522 83805665 -11466986 - B1_Mm SINE Alu -4 143 5 6 1224 1257 91 17 0 chr17 83805752 83805928 -11466723 + B2_Mm1t SINE B2 1 179 -14 6 1224 357 86 5 63 chr17 83805976 83806085 -11466566 + B2_Mm2 SINE B2 48 185 -10 6 1224 393 266 213 45 chr17 83807210 83807454 -11465197 + B4A SINE B4 4 288 -4 6 1224 261 0 0 0 chr17 83807636 83807665 -11464986 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1224 333 323 32 0 chr17 83807947 83808040 -11464611 - MIR SINE MIR -62 146 51 6 1224 204 258 11 22 chr17 83808593 83808684 -11463967 + T-rich Low_complexity Low_complexity 6 95 0 6 1224 335 319 102 15 chr17 83808691 83808828 -11463823 - RSINE1 SINE B4 -13 152 4 6 1224 2796 69 58 3 chr17 83809708 83810087 -11462564 + MTB LTR MaLR 1 400 0 6 1224 477 143 99 30 chr17 83810108 83810209 -11462442 - B1_Mur4 SINE Alu -2 148 41 6 1224 198 0 0 0 chr17 83810212 83810234 -11462417 + (TTTTTG)n Simple_repeat Simple_repeat 4 25 0 6 1224 21 0 0 0 chr17 83810248 83810269 -11462382 + AT_rich Low_complexity Low_complexity 1 21 0 6 1224 8325 94 32 10 chr17 83810841 83812207 -11460444 - MusHAL1 LINE L1 -632 2080 685 6 1224 947 125 63 40 chr17 83812200 83812253 -11460398 - L1VL2 LINE L1 -6090 245 197 6 1224 2201 91 28 21 chr17 83812253 83812578 -11460073 - IAPLTR2b LTR ERVK 0 327 1 6 1224 947 125 63 40 chr17 83812578 83812699 -11459952 - L1VL2 LINE L1 -6139 196 67 6 1224 33165 79 23 11 chr17 83814523 83820726 -11451925 - L1Md_F2 LINE L1 0 6582 301 6 1224 431 183 11 11 chr17 83820746 83820840 -11451811 - L1VL1 LINE L1 -6174 248 155 6 1224 1165 69 0 0 chr17 83821222 83821367 -11451284 - B1_Mus1 SINE Alu 0 148 4 6 1224 24 32 0 0 chr17 83821424 83821455 -11451196 + AT_rich Low_complexity Low_complexity 1 31 0 6 1224 255 103 0 0 chr17 83821624 83821663 -11450988 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 1224 610 274 58 11 chr17 83822021 83822209 -11450442 - B3A SINE B2 0 198 2 6 1224 419 294 110 34 chr17 83822536 83822800 -11449851 - B4A SINE B4 -8 284 1 6 1224 312 70 0 0 chr17 83823014 83823057 -11449594 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1224 800 179 50 7 chr17 83823263 83823282 -11449369 - B1_Mur3 SINE Alu -1 148 130 6 1224 198 0 0 0 chr17 83823282 83823304 -11449347 + (TTTTG)n Simple_repeat Simple_repeat 5 26 0 6 1224 800 179 50 7 chr17 83823304 83823425 -11449226 - B1_Mur3 SINE Alu -20 129 2 6 1224 527 202 55 24 chr17 83823784 83823911 -11448740 - B3A SINE B2 -66 132 2 6 1224 279 364 0 38 chr17 83824089 83824169 -11448482 + ID4_ SINE ID 1 77 -6 6 1224 298 311 74 25 chr17 83824229 83824351 -11448300 - Tigger13a DNA MER2_type -640 131 4 6 1224 33 66 0 0 chr17 83824438 83824499 -11448152 + AT_rich Low_complexity Low_complexity 1 61 0 6 1224 21 71 0 0 chr17 83825008 83825050 -11447601 + AT_rich Low_complexity Low_complexity 1 42 0 7 1224 833 118 144 23 chr17 83826815 83826989 -11445662 - B2_Mm2 SINE B2 0 195 1 7 1224 313 339 113 0 chr17 83827183 83827298 -11445353 - MER5B DNA MER1_type -26 152 25 7 1224 22 0 0 0 chr17 83828272 83828294 -11444357 + AT_rich Low_complexity Low_complexity 1 22 0 7 1224 1107 59 0 7 chr17 83828681 83828818 -11443833 + B1_Mus1 SINE Alu 1 136 -12 7 1224 325 241 45 0 chr17 83828822 83828898 -11443753 - B2_Mm2 SINE B2 -137 79 1 7 1224 22 56 0 0 chr17 83829467 83829503 -11443148 + AT_rich Low_complexity Low_complexity 1 36 0 7 1224 276 246 49 0 chr17 83829972 83830033 -11442618 - ID4_ SINE ID 0 83 20 7 1224 228 67 0 0 chr17 83830468 83830498 -11442153 + (TCCCC)n Simple_repeat Simple_repeat 1 30 0 7 1224 441 54 0 0 chr17 83830501 83830557 -11442094 + (TC)n Simple_repeat Simple_repeat 2 57 0 7 1224 479 274 149 35 chr17 83830871 83831132 -11441519 - B4A SINE B4 -1 291 1 7 1224 212 250 115 0 chr17 83831285 83831337 -11441314 - L2b LINE L2 -5 3370 3313 7 1224 461 202 37 0 chr17 83832032 83832141 -11440510 + PB1D7 SINE Alu 1 113 -7 7 1224 198 103 0 0 chr17 83832472 83832501 -11440150 + (GAAA)n Simple_repeat Simple_repeat 3 31 0 7 1224 216 216 0 0 chr17 83832840 83832891 -11439760 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1224 354 280 83 9 chr17 83832945 83833053 -11439598 - PB1D9 SINE Alu -3 117 2 7 1224 705 283 17 0 chr17 83833095 83833268 -11439383 + B3 SINE B2 3 178 -38 7 1224 295 331 27 89 chr17 83833537 83833577 -11439074 - ID_B1 SINE B4 -4 220 188 7 1224 219 36 0 0 chr17 83833577 83833605 -11439046 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 7 1224 1081 43 0 42 chr17 83833605 83833749 -11438902 - B1_Mus1 SINE Alu -9 139 2 7 1224 295 331 27 89 chr17 83833749 83833853 -11438798 - ID_B1 SINE B4 -37 187 85 7 1224 821 123 231 86 chr17 83833865 83834051 -11438600 - B3 SINE B2 0 216 4 7 1224 654 182 0 55 chr17 83834365 83834503 -11438148 - B1_Mur1 SINE Alu -7 142 12 7 1224 182 245 37 19 chr17 83834552 83834606 -11438045 + MIR3 SINE MIR 125 179 -29 7 1224 805 195 0 39 chr17 83835107 83835262 -11437389 + B1_Mur2 SINE Alu 1 149 0 7 1224 502 190 8 8 chr17 83835263 83835380 -11437271 + A-rich Low_complexity Low_complexity 5 121 0 7 1224 1109 83 111 23 chr17 83837011 83837183 -11435468 + B2_Mm2 SINE B2 2 188 -7 7 1224 403 277 86 14 chr17 83837429 83837568 -11435083 - B1F2 SINE Alu 0 149 1 7 1224 351 267 86 8 chr17 83838045 83838162 -11434489 - L1MB1 LINE L1 -162 6006 5881 7 1224 741 269 114 62 chr17 83838190 83838545 -11434106 - L1MB1 LINE L1 -429 5739 5361 7 1224 1452 58 27 0 chr17 83838545 83838733 -11433918 - B2_Mm2 SINE B2 -1 194 2 7 1224 741 262 107 90 chr17 83838733 83838855 -11433796 - L1MB1 LINE L1 -952 5360 5254 7 1224 239 286 112 13 chr17 83840312 83840480 -11432171 + L2a LINE L2 3186 3422 -4 7 1224 1186 62 0 0 chr17 83840994 83841140 -11431511 + B1_Mm SINE Alu 2 147 0 7 1224 207 0 0 0 chr17 83841140 83841163 -11431488 + (A)n Simple_repeat Simple_repeat 1 23 0 7 1224 250 267 70 0 chr17 83842634 83842720 -11429931 + RSINE1 SINE B4 41 132 -33 7 1224 288 286 152 34 chr17 83842804 83842981 -11429670 + B4A SINE B4 1 198 -94 7 1224 189 0 0 0 chr17 83843054 83843075 -11429576 + (CA)n Simple_repeat Simple_repeat 1 21 0 7 1224 319 207 110 0 chr17 83843124 83843206 -11429445 + RSINE1 SINE B4 73 163 -2 7 1224 316 216 0 51 chr17 83843286 83843364 -11429287 + B4A SINE B4 219 292 0 7 1224 279 292 100 36 chr17 83844458 83844568 -11428083 + PB1 SINE Alu 11 127 0 7 1224 767 106 106 0 chr17 83844816 83844958 -11427693 + B2_Mm2 SINE B2 33 189 -6 7 1224 925 150 7 26 chr17 83845015 83845166 -11427485 + B1_Mur2 SINE Alu 2 149 0 7 1224 1472 181 99 38 chr17 83845614 83845959 -11426692 - ORR1C1 LTR MaLR -12 366 1 7 1224 889 229 21 0 chr17 83846198 83846386 -11426265 + B3 SINE B2 5 196 -20 7 1224 377 218 175 45 chr17 83848165 83848319 -11424332 + B3A SINE B2 9 182 -16 7 1224 256 256 117 85 chr17 83849219 83849407 -11423244 + L1M5 LINE L1 5569 5762 -411 7 1224 186 71 0 0 chr17 83849825 83849853 -11422798 + (T)n Simple_repeat Simple_repeat 1 28 0 7 1224 372 88 0 0 chr17 83850147 83850204 -11422447 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 1224 410 235 17 34 chr17 83851479 83851598 -11421053 - PB1D9 SINE Alu -3 117 1 7 1224 939 166 0 0 chr17 83851652 83851791 -11420860 - B1_Mus2 SINE Alu -8 139 1 7 1224 238 318 12 0 chr17 83852219 83852304 -11420347 - L1MB7 LINE L1 -7 6177 6092 7 1224 311 214 84 0 chr17 83852416 83852521 -11420130 - B1F SINE Alu 0 149 2 7 1224 488 239 214 33 chr17 83853217 83853399 -11419252 + ID_B1 SINE B4 6 220 -4 7 1224 195 173 0 0 chr17 83853429 83853481 -11419170 + GA-rich Low_complexity Low_complexity 2 53 0 7 1224 1092 62 14 0 chr17 83853933 83854077 -11418574 + B1_Mus2 SINE Alu 1 146 -1 7 1224 435 335 94 37 chr17 83854451 83854696 -11417955 - MER2 DNA MER2_type 0 345 87 7 1224 247 360 70 0 chr17 83854751 83854851 -11417800 - MER2 DNA MER2_type -238 107 1 7 1224 210 231 92 0 chr17 83856700 83856765 -11415886 + RSINE1 SINE B4 93 163 -2 7 1224 27 29 0 0 chr17 83856766 83856800 -11415851 + AT_rich Low_complexity Low_complexity 1 34 0 7 1224 396 294 38 32 chr17 83857286 83857444 -11415207 - RLTR40 LTR ERVK -11 806 648 7 1224 544 246 8 23 chr17 83857705 83857834 -11414817 + ID_B1 SINE B4 77 203 -21 7 1224 262 239 196 27 chr17 83858322 83858419 -11414232 + B4A SINE B4 86 203 -89 7 1224 204 122 0 0 chr17 83858419 83858460 -11414191 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 7 1224 262 239 196 27 chr17 83858460 83858474 -11414177 + B4A SINE B4 204 216 -76 7 1224 24 0 0 0 chr17 83858522 83858546 -11414105 + AT_rich Low_complexity Low_complexity 1 24 0 7 1224 212 154 0 0 chr17 83858694 83858733 -11413918 + CT-rich Low_complexity Low_complexity 1 39 0 7 1224 26 50 0 0 chr17 83859935 83859975 -11412676 + AT_rich Low_complexity Low_complexity 1 40 0 7 1224 922 161 83 0 chr17 83860003 83860183 -11412468 + B2_Mm2 SINE B2 1 195 0 7 1224 24 53 0 0 chr17 83861572 83861610 -11411041 + AT_rich Low_complexity Low_complexity 1 38 0 7 1224 334 264 102 19 chr17 83861611 83861719 -11410932 - PB1D10 SINE Alu 0 117 1 7 1224 776 51 254 0 chr17 83861977 83862095 -11410556 + B1_Mus1 SINE Alu 1 148 0 7 1224 329 304 64 0 chr17 83862152 83862277 -11410374 - RSINE1 SINE B4 -31 134 2 7 1224 363 281 66 15 chr17 83863134 83863271 -11409380 + B1F1 SINE Alu 1 144 -5 7 1224 421 247 221 0 chr17 83863284 83863438 -11409213 + B3A SINE B2 5 192 -6 7 1224 235 133 22 0 chr17 83863555 83863600 -11409051 - B1_Mur4 SINE Alu -9 141 96 7 1224 425 193 34 11 chr17 83864106 83864195 -11408456 + MIR SINE MIR 83 173 -89 7 1224 852 225 183 8 chr17 83864211 83864457 -11408194 + B4A SINE B4 2 290 -2 7 1224 315 286 18 37 chr17 83865013 83865122 -11407529 + PB1D10 SINE Alu 10 116 -1 7 1224 22 35 0 0 chr17 83865354 83865383 -11407268 + AT_rich Low_complexity Low_complexity 1 29 0 7 1224 643 247 16 37 chr17 83865393 83865582 -11407069 + B4 SINE B4 17 201 -91 7 1224 283 199 93 4 chr17 83865991 83866079 -11406572 - PB1 SINE Alu 0 127 7 7 1224 232 282 55 0 chr17 83866541 83866637 -11406014 + MIRc SINE MIR 61 166 -96 7 1224 902 182 0 0 chr17 83867620 83867768 -11404883 + B1_Mur4 SINE Alu 2 149 -1 7 1224 2365 149 38 7 chr17 83867846 83868298 -11404353 - RLTR20B2 LTR ERVK -90 470 5 7 1224 2224 152 64 7 chr17 83868300 83868740 -11403911 - MYSERV16_I-int LTR ERVK -84 2242 1842 7 1224 488 188 39 19 chr17 83868740 83868843 -11403808 - RLTR20B2 LTR ERVK 0 560 456 7 1224 1376 184 70 22 chr17 83868843 83869159 -11403492 - RLTR20B2 LTR ERVK -229 331 1 7 1224 273 250 27 14 chr17 83869182 83869255 -11403396 + ID4 SINE ID 1 74 -9 7 1224 820 146 73 0 chr17 83869541 83869678 -11402973 - B1_Mus1 SINE Alu -1 147 1 7 1224 241 208 21 0 chr17 83869752 83869800 -11402851 + PB1 SINE Alu 5 53 -74 7 1224 222 37 0 0 chr17 83870200 83870227 -11402424 + (A)n Simple_repeat Simple_repeat 1 27 0 7 1224 520 233 0 19 chr17 83873176 83873281 -11399370 + PB1D9 SINE Alu 1 103 -17 7 1224 1897 140 19 0 chr17 83873315 83873630 -11399021 + ORR1A4 LTR MaLR 1 321 -8 7 1224 970 154 99 0 chr17 83873954 83874155 -11398496 + URR1A DNA MER1_type 6 226 0 7 1224 299 220 78 29 chr17 83874160 83874263 -11398388 - L1MB8 LINE L1 -187 5991 5884 7 1224 1028 32 32 0 chr17 83874301 83874426 -11398225 + B1_Mus1 SINE Alu 5 133 -15 7 1224 1088 79 164 0 chr17 83874469 83874634 -11398017 + B2_Mm2 SINE B2 4 195 0 7 1224 611 87 0 53 chr17 83874898 83875031 -11397620 + (TCC)n Simple_repeat Simple_repeat 3 128 0 7 1224 551 312 25 19 chr17 83875121 83875281 -11397370 + B4A SINE B4 2 162 -130 7 1224 570 341 13 77 chr17 83875324 83875536 -11397115 + B4A SINE B4 1 199 -93 7 1224 623 263 85 11 chr17 83875536 83875724 -11396927 - B3 SINE B2 -11 205 4 7 1224 570 341 13 77 chr17 83875724 83875822 -11396829 + B4A SINE B4 200 291 -1 7 1224 397 244 60 22 chr17 83875914 83876048 -11396603 + B3 SINE B2 78 216 0 7 1224 216 319 42 0 chr17 83876789 83876861 -11395790 - PB1D7 SINE Alu -41 79 5 7 1224 248 70 23 0 chr17 83879540 83879583 -11393068 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 7 1224 395 202 69 29 chr17 83879723 83879825 -11392826 - PB1D10 SINE Alu 0 117 12 7 1224 333 271 8 71 chr17 83880300 83880427 -11392224 + PB1D9 SINE Alu 1 119 -1 7 1224 1239 31 0 24 chr17 83880514 83880678 -11391973 + B2_Mm1a SINE B2 1 160 -33 7 1224 428 48 0 16 chr17 83880678 83880742 -11391909 + (TAAA)n Simple_repeat Simple_repeat 3 65 0 8 1224 316 198 152 30 chr17 83880895 83880994 -11391657 - PB1D10 SINE Alu 0 117 7 8 1224 481 251 175 46 chr17 83882002 83882328 -11390323 - RLTR9A LTR ERVK 0 368 1 8 1224 898 140 53 86 chr17 83882392 83882579 -11390072 + B2_Mm2 SINE B2 1 181 -14 8 1224 815 188 0 0 chr17 83882847 83882996 -11389655 + B1_Mur4 SINE Alu 1 149 -1 8 1224 204 125 0 0 chr17 83882997 83883029 -11389622 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 8 1224 207 0 0 0 chr17 83883045 83883068 -11389583 + (A)n Simple_repeat Simple_repeat 1 23 0 8 1224 1309 102 58 61 chr17 83883491 83883541 -11389110 - RMER6A LTR ERVK -367 389 336 8 1224 1150 82 0 0 chr17 83883541 83883688 -11388963 + B1_Mus1 SINE Alu 2 148 0 8 1224 1309 89 46 53 chr17 83883688 83883924 -11388727 - RMER6A LTR ERVK -421 335 59 8 1224 295 296 52 69 chr17 83884068 83884184 -11388467 - ID_B1 SINE B4 -20 204 91 8 1225 226 280 0 26 chr17 83887755 83887832 -11384819 + CT-rich Low_complexity Low_complexity 3 77 0 8 1225 225 254 14 27 chr17 83888875 83888948 -11383703 + (TATATG)n Simple_repeat Simple_repeat 5 76 0 8 1225 818 223 11 33 chr17 83889059 83889240 -11383411 + B3 SINE B2 33 209 -7 8 1225 1215 41 7 0 chr17 83889328 83889474 -11383177 + B1_Mm SINE Alu 1 147 0 8 1225 2105 129 25 41 chr17 83889495 83889770 -11382881 + ORR1B2 LTR MaLR 1 267 -100 8 1225 189 74 0 0 chr17 83889770 83889797 -11382854 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 1225 2105 129 25 41 chr17 83889797 83889886 -11382765 + ORR1B2 LTR MaLR 268 357 -10 8 1225 1370 222 157 15 chr17 83890957 83891300 -11381351 - MTD LTR MaLR -14 405 14 8 1225 1206 78 66 16 chr17 83891642 83891824 -11380827 + B2_Mm2 SINE B2 5 195 0 8 1225 1250 114 10 15 chr17 83891908 83892104 -11380547 - B2_Mm2 SINE B2 0 195 1 8 1225 854 73 182 16 chr17 83892125 83892251 -11380400 - B1_Mus1 SINE Alu -1 147 1 8 1225 752 211 60 16 chr17 83892251 83892434 -11380217 - B3A SINE B2 0 198 8 8 1225 509 121 259 44 chr17 83892445 83892570 -11380081 - B3 SINE B2 -3 213 74 8 1225 391 267 209 54 chr17 83892584 83892881 -11379770 - RLTR15 LTR ERVK -16 343 1 8 1225 284 290 95 21 chr17 83892881 83892957 -11379694 - B3A SINE B2 -115 83 1 8 1225 239 268 31 118 chr17 83893452 83893579 -11379072 - RMER15 LTR ERVL -113 462 347 8 1225 488 304 0 14 chr17 83893982 83894122 -11378529 + RMER15-int LTR ERVL 1052 1189 -3810 8 1225 834 60 197 0 chr17 83894128 83894245 -11378406 + B1_Mus1 SINE Alu 1 140 -8 8 1225 507 360 33 4 chr17 83894426 83894666 -11377985 + RMER15-int LTR ERVL 1433 1679 -3320 8 1225 2469 123 146 4 chr17 83894970 83895436 -11377215 - RLTR47_MM LTR ERV1 0 532 1 8 1225 296 370 25 15 chr17 83895516 83895719 -11376932 - MuRRS4-int LTR ERV1 -130 4933 4729 8 1225 346 300 53 23 chr17 83895591 83895724 -11376927 - RNERVK23-int LTR ERVK -494 7723 7587 8 1225 370 289 80 57 chr17 83896230 83896406 -11376245 + Lx8 LINE L1 7041 7220 -253 8 1225 860 121 68 0 chr17 83896529 83896661 -11375990 - B1_Mur4 SINE Alu -9 141 1 8 1225 1654 221 65 30 chr17 83896707 83897108 -11375543 + MTD LTR MaLR 5 419 0 8 1225 3280 235 149 62 chr17 83897108 83898151 -11374500 + MTD-int LTR MaLR 1 1143 -115 8 1225 1125 75 7 0 chr17 83898151 83898298 -11374353 - B1_Mus1 SINE Alu 0 148 1 8 1225 3280 235 149 62 chr17 83898298 83898406 -11374245 + MTD-int LTR MaLR 1144 1252 -6 8 1225 1476 229 99 46 chr17 83898403 83898461 -11374190 + MTD LTR MaLR 6 52 -367 8 1225 945 143 68 42 chr17 83898461 83898651 -11374000 - B2_Mm2 SINE B2 0 195 1 8 1225 1476 229 99 46 chr17 83898651 83898985 -11373666 + MTD LTR MaLR 53 419 0 8 1225 1140 168 27 36 chr17 83899138 83899360 -11373291 - ORR1C2 LTR MaLR -163 221 2 8 1225 410 245 143 27 chr17 83899360 83899505 -11373146 + B3 SINE B2 55 216 0 8 1225 829 205 18 18 chr17 83899535 83899699 -11372952 - B3 SINE B2 -38 178 15 8 1225 336 221 146 10 chr17 83899736 83899832 -11372819 - PB1D7 SINE Alu -3 117 9 8 1225 3319 84 29 26 chr17 83900003 83900494 -11372157 + LTRIS_Mus LTR ERV1 1 492 -95 8 1225 1290 152 67 9 chr17 83900521 83900773 -11371878 + LTRIS_Mus LTR ERV1 352 616 -38 8 1225 611 242 112 15 chr17 83900813 83901010 -11371641 + B3 SINE B2 1 216 0 8 1225 724 215 0 7 chr17 83901096 83901246 -11371405 + B1_Mur1 SINE Alu 1 149 0 8 1225 207 0 0 0 chr17 83902157 83902180 -11370471 + (A)n Simple_repeat Simple_repeat 1 23 0 8 1225 1676 16 0 5 chr17 83902182 83902372 -11370279 + B2_Mm1a SINE B2 5 193 0 8 1225 355 235 305 7 chr17 83902948 83903102 -11369549 + B3 SINE B2 2 201 -15 8 1225 633 240 148 45 chr17 83903866 83904110 -11368541 + B4 SINE B4 10 278 -14 8 1225 342 0 0 0 chr17 83904112 83904150 -11368501 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 1225 726 125 0 0 chr17 83904172 83904284 -11368367 + B1_Mus1 SINE Alu 10 121 -27 8 1225 558 252 19 72 chr17 83904407 83904616 -11368035 + B3A SINE B2 1 198 0 8 1225 469 286 29 0 chr17 83904636 83904741 -11367910 - B1_Mur1 SINE Alu -41 108 1 8 1225 244 233 152 19 chr17 83904938 83904955 -11367696 - B1_Mus2 SINE Alu -3 144 125 8 1225 1626 42 5 0 chr17 83904955 83905147 -11367504 - B2_Mm1t SINE B2 0 193 1 8 1225 251 215 69 92 chr17 83905147 83905234 -11367417 - PB1D9 SINE Alu -10 110 26 8 1225 202 222 0 0 chr17 83905832 83905868 -11366783 + polypyrimidine Low_complexity Low_complexity 2 37 0 8 1225 1144 82 0 0 chr17 83905871 83906017 -11366634 - B1_Mm SINE Alu -1 146 1 8 1225 1261 89 50 6 chr17 83906094 83906274 -11366377 - B2_Mm2 SINE B2 -6 189 2 8 1225 768 78 9 9 chr17 83906540 83906656 -11365995 + B1_Mus1 SINE Alu 33 148 0 8 1225 489 188 85 8 chr17 83906875 83906993 -11365658 - B1F2 SINE Alu 0 149 23 8 1225 228 287 85 85 chr17 83906878 83907019 -11365632 - B4 SINE B4 -70 222 82 8 1225 240 197 0 101 chr17 83907035 83907114 -11365537 + L2a LINE L2 3205 3275 -151 8 1225 186 71 0 0 chr17 83907401 83907429 -11365222 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 8 1225 766 132 18 0 chr17 83907429 83907543 -11365108 - PB1D9 SINE Alu -4 116 1 8 1225 219 69 0 0 chr17 83907703 83907732 -11364919 + (TTGTG)n Simple_repeat Simple_repeat 4 32 0 8 1225 354 246 28 91 chr17 83907732 83907875 -11364776 - ID_B1 SINE B4 -11 213 80 8 1225 487 313 87 42 chr17 83907971 83908182 -11364469 - B3A SINE B2 -1 215 3 8 1225 607 231 0 41 chr17 83908373 83908495 -11364156 + B3 SINE B2 99 215 -1 8 1225 918 84 176 0 chr17 83908595 83908737 -11363914 - MTC LTR MaLR -55 366 200 8 1225 1175 189 312 3 chr17 83909206 83909514 -11363137 + MTD LTR MaLR 17 419 0 8 1225 525 285 91 20 chr17 83909527 83909724 -11362927 - L1M4 LINE L1 -605 5573 5363 8 1225 481 259 241 31 chr17 83909983 83910174 -11362477 - RLTR18B LTR ERVK -1 511 281 8 1225 489 181 284 39 chr17 83910179 83910334 -11362317 + MTD LTR MaLR 224 416 -3 8 1225 359 177 47 71 chr17 83910390 83910475 -11362176 - RLTR18B LTR ERVK -236 276 194 8 1225 929 123 172 0 chr17 83910475 83910638 -11362013 + B2_Mm1t SINE B2 1 191 -2 8 1225 793 257 50 46 chr17 83910692 83910953 -11361698 - RLTR18 LTR ERVK -335 281 20 8 1225 377 253 13 0 chr17 83911044 83911123 -11361528 + ID4 SINE ID 2 81 -2 8 1225 1191 82 37 37 chr17 83911161 83911352 -11361299 + B2_Mm2 SINE B2 2 192 -3 8 1225 999 211 39 14 chr17 83911599 83911806 -11360845 + B3 SINE B2 5 216 0 8 1225 219 139 0 0 chr17 83913046 83913082 -11359569 + (TATG)n Simple_repeat Simple_repeat 2 37 0 8 1225 452 258 25 38 chr17 83914202 83914359 -11358292 + GA-rich Low_complexity Low_complexity 2 156 0 8 1225 310 345 86 20 chr17 83914363 83914514 -11358137 + HAL1-3A_ME LINE L1 2284 2444 -414 8 1225 280 244 199 61 chr17 83914919 83915050 -11357601 - MIR SINE MIR -54 208 60 8 1225 1248 116 21 10 chr17 83915089 83915281 -11357370 + B2_Mm2 SINE B2 2 195 0 8 1225 2450 135 34 10 chr17 83915425 83915813 -11356838 - MTC LTR MaLR -20 401 5 8 1225 2502 95 3 0 chr17 83916119 83916445 -11356206 + ORR1A2 LTR MaLR 1 327 0 8 1225 1339 112 78 0 chr17 83916477 83916683 -11355968 - URR1A DNA MER1_type 0 226 5 8 1225 502 137 21 0 chr17 83916685 83916780 -11355871 + GA-rich Low_complexity Low_complexity 2 98 0 8 1225 3050 114 0 2 chr17 83917624 83918055 -11354596 + RLTR10C LTR ERVK 1 430 -6 8 1225 312 70 0 0 chr17 83918663 83918706 -11353945 + (T)n Simple_repeat Simple_repeat 1 43 0 8 1225 207 0 0 0 chr17 83918981 83919004 -11353647 + (CCTG)n Simple_repeat Simple_repeat 4 26 0 8 1225 604 222 37 7 chr17 83919433 83919558 -11353093 + B1_Mur1 SINE Alu 9 138 -11 8 1225 243 0 0 0 chr17 83919558 83919585 -11353066 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 1225 375 105 0 0 chr17 83919818 83919875 -11352776 + (TGAG)n Simple_repeat Simple_repeat 1 57 0 8 1225 461 285 32 0 chr17 83919986 83920109 -11352542 + ID_B1 SINE B4 72 198 -26 8 1225 21 0 0 0 chr17 83920329 83920350 -11352301 + AT_rich Low_complexity Low_complexity 1 21 0 8 1225 360 0 0 0 chr17 83920418 83920458 -11352193 + (TG)n Simple_repeat Simple_repeat 2 41 0 8 1225 889 278 31 31 chr17 83920542 83920828 -11351823 + B4 SINE B4 5 290 -2 8 1225 283 202 12 12 chr17 83920838 83920918 -11351733 + (CA)n Simple_repeat Simple_repeat 1 80 0 8 1225 528 44 0 0 chr17 83920970 83921038 -11351613 + L1_Mus2 LINE L1 6499 6566 0 8 1225 216 159 0 43 chr17 83921044 83921090 -11351561 + A-rich Low_complexity Low_complexity 2 45 0 8 1225 411 267 11 0 chr17 83921182 83921272 -11351379 - RSINE1 SINE B4 -55 110 20 8 1225 268 217 245 170 chr17 83921307 83921507 -11351144 + ID_B1 SINE B4 2 216 -8 9 1225 237 253 45 0 chr17 83921758 83921830 -11350821 - B1F1 SINE Alu 0 117 45 9 1225 385 253 0 21 chr17 83921915 83922006 -11350645 - RSINE1 SINE B4 -35 130 42 9 1225 834 272 51 100 chr17 83922006 83922455 -11350196 + RLTR11B LTR ERVK 1 427 -26 9 1225 279 308 0 21 chr17 83922431 83922524 -11350127 - RSINE1 SINE B4 -69 96 6 9 1225 1620 161 37 27 chr17 83923444 83923744 -11348907 + RMER1C Other Other 1028 1330 -12 9 1225 221 182 58 43 chr17 83924819 83924888 -11347763 + MIRb SINE MIR 197 266 -2 9 1225 504 0 0 0 chr17 83925308 83925364 -11347287 + (GA)n Simple_repeat Simple_repeat 1 56 0 9 1225 231 161 216 103 chr17 83926203 83926300 -11346351 + B4 SINE B4 4 111 -181 9 1225 1295 69 11 22 chr17 83926214 83926392 -11346259 + B2_Mm1t SINE B2 10 185 -8 9 1225 342 45 0 0 chr17 83926411 83926455 -11346196 + (TG)n Simple_repeat Simple_repeat 2 45 0 9 1225 366 280 21 0 chr17 83926534 83926627 -11346024 - B4A SINE B4 -196 96 2 9 1225 361 299 42 88 chr17 83926996 83927304 -11345347 - RMER10A LTR ERVL -27 415 122 9 1225 241 314 69 53 chr17 83927531 83927589 -11345062 + MER3 DNA MER1_type 13 64 -145 9 1225 207 0 0 0 chr17 83927589 83927612 -11345039 + (CAAG)n Simple_repeat Simple_repeat 4 26 0 9 1225 241 314 69 53 chr17 83927612 83927684 -11344967 + MER3 DNA MER1_type 65 145 -64 9 1225 258 345 81 20 chr17 83928496 83928644 -11344007 + B4A SINE B4 38 194 -98 9 1225 636 202 0 16 chr17 83928551 83928671 -11343980 + B1F2 SINE Alu 15 132 -17 9 1225 646 283 89 25 chr17 83928671 83928907 -11343744 + B4 SINE B4 2 252 -40 9 1225 1201 68 0 0 chr17 83928992 83929139 -11343512 + B1_Mus2 SINE Alu 1 147 0 9 1225 210 71 0 0 chr17 83929212 83929240 -11343411 + (CAAAG)n Simple_repeat Simple_repeat 2 29 0 9 1225 198 0 0 0 chr17 83929426 83929448 -11343203 + (CA)n Simple_repeat Simple_repeat 2 23 0 9 1225 587 273 121 9 chr17 83929965 83930162 -11342489 + ID_B1 SINE B4 5 202 -90 9 1225 283 246 96 103 chr17 83930154 83930290 -11342361 - ORR1E LTR MaLR -224 135 1 9 1225 396 118 0 0 chr17 83930530 83930598 -11342053 + (CA)n Simple_repeat Simple_repeat 2 69 0 9 1225 874 284 42 13 chr17 83930744 83930983 -11341668 + B4A SINE B4 3 248 -44 9 1225 355 294 0 40 chr17 83930996 83931120 -11341531 + (CATATA)n Simple_repeat Simple_repeat 1 119 0 9 1225 907 272 91 15 chr17 83931120 83931515 -11341136 - L1MB3 LINE L1 -22 6161 5737 9 1225 635 299 92 44 chr17 83931555 83931828 -11340823 + ORR1E LTR MaLR 74 359 0 9 1225 461 268 86 21 chr17 83931846 83932133 -11340518 - L1MB3 LINE L1 -460 5720 5392 9 1225 288 275 150 64 chr17 83932608 83932748 -11339903 + L2c LINE L2 3236 3387 0 9 1225 424 277 115 25 chr17 83932913 83933035 -11339616 - RSINE1 SINE B4 -16 149 17 9 1225 617 275 62 48 chr17 83933081 83933291 -11339360 - B3A SINE B2 -3 213 1 9 1225 268 234 47 0 chr17 83933482 83933546 -11339105 + B1F SINE Alu 14 80 -69 9 1225 2379 147 8 8 chr17 83933654 83934032 -11338619 - ORR1C1 LTR MaLR 0 378 1 9 1225 573 302 0 24 chr17 83934285 83934451 -11338200 + B4A SINE B4 1 162 -130 9 1225 225 255 0 0 chr17 83934453 83934500 -11338151 + (CA)n Simple_repeat Simple_repeat 1 47 0 9 1225 2160 82 16 128 chr17 83934841 83934919 -11337732 - ORR1A2 LTR MaLR 0 327 286 9 1225 1159 88 0 13 chr17 83934919 83935068 -11337583 - B1_Mm SINE Alu 0 147 1 9 1225 2160 82 16 128 chr17 83935068 83935355 -11337296 - ORR1A2 LTR MaLR -42 285 3 9 1225 425 335 32 13 chr17 83935845 83936002 -11336649 + B4 SINE B4 82 241 -51 9 1225 477 34 0 0 chr17 83936023 83936082 -11336569 + (CA)n Simple_repeat Simple_repeat 1 59 0 9 1225 783 174 0 17 chr17 83936162 83936343 -11336308 + CT-rich Low_complexity Low_complexity 3 180 0 9 1225 390 91 0 0 chr17 83939833 83939888 -11332763 + (GA)n Simple_repeat Simple_repeat 1 55 0 9 1225 472 338 62 25 chr17 83939888 83940131 -11332520 - MER34A1 LTR ERV1 -91 496 245 9 1225 401 259 27 18 chr17 83940131 83940241 -11332410 - PB1D10 SINE Alu 0 117 7 9 1225 286 310 170 42 chr17 83940250 83940415 -11332236 - MER34A1 LTR ERV1 -343 244 59 9 1225 963 252 149 0 chr17 83940647 83940889 -11331762 + B4A SINE B4 8 285 -7 9 1225 185 342 52 17 chr17 83941292 83941408 -11331243 + L2a LINE L2 3296 3415 -11 9 1225 21 0 0 0 chr17 83941514 83941535 -11331116 + AT_rich Low_complexity Low_complexity 1 21 0 9 1225 222 37 0 0 chr17 83941731 83941758 -11330893 + (T)n Simple_repeat Simple_repeat 1 27 0 9 1225 2101 154 70 35 chr17 83942052 83942449 -11330202 + MTC LTR MaLR 3 413 -8 9 1225 457 235 111 10 chr17 83942569 83942668 -11329983 - PB1D10 SINE Alu -2 115 7 9 1225 447 282 51 38 chr17 83942984 83943205 -11329446 - MLT1A LTR MaLR 0 374 52 9 1225 979 136 0 0 chr17 83943263 83943410 -11329241 - B1_Mur3 SINE Alu -2 147 1 9 1225 1677 27 0 0 chr17 83943420 83943606 -11329045 - B2_Mm1t SINE B2 -6 187 2 9 1225 259 228 0 17 chr17 83943611 83943669 -11328982 - ID_B1 SINE B4 0 224 168 9 1225 1687 68 13 17 chr17 83944255 83944494 -11328157 - L1_Mus3 LINE L1 -5 6633 6396 9 1225 264 59 0 0 chr17 83944495 83944529 -11328122 + (TTTC)n Simple_repeat Simple_repeat 1 34 0 9 1225 1178 54 0 20 chr17 83944532 83944683 -11327968 - B1_Mus1 SINE Alu 0 148 1 9 1225 272 267 53 13 chr17 83946709 83946785 -11325866 - ID_B1 SINE B4 -13 211 133 9 1225 292 123 211 0 chr17 83946791 83946848 -11325803 - tRNA-Ala-GCY_ tRNA tRNA -2 73 5 9 1225 432 229 0 76 chr17 83947179 83947297 -11325354 + MIR SINE MIR 92 200 -62 9 1225 286 141 225 0 chr17 83947501 83947572 -11325079 + RSINE1 SINE B4 6 92 -73 9 1225 249 108 0 0 chr17 83947617 83947654 -11324997 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 9 1225 266 313 62 87 chr17 83947675 83947836 -11324815 - MLT1J LTR MaLR -213 299 143 9 1225 234 328 81 11 chr17 83948342 83948527 -11324124 + HAL1 LINE L1 8 205 -2302 9 1225 872 98 8 0 chr17 83948640 83948763 -11323888 + B1_Mus2 SINE Alu 24 147 0 9 1225 299 262 99 99 chr17 83948642 83948803 -11323848 + B4A SINE B4 111 271 -21 9 1225 240 226 73 31 chr17 83949123 83949219 -11323432 + L1MC4a LINE L1 7475 7574 -308 9 1225 716 234 37 5 chr17 83949265 83949454 -11323197 + B3A SINE B2 2 196 -2 9 1225 387 0 0 0 chr17 83949480 83949523 -11323128 + (GA)n Simple_repeat Simple_repeat 1 43 0 9 1225 28 48 0 0 chr17 83949582 83949624 -11323027 + AT_rich Low_complexity Low_complexity 1 42 0 9 1225 1037 95 7 0 chr17 83949813 83949950 -11322701 + B1_Mur4 SINE Alu 3 140 -10 9 1225 477 50 0 0 chr17 83949983 83950043 -11322608 + (GGGA)n Simple_repeat Simple_repeat 4 63 0 9 1225 246 208 21 0 chr17 83950054 83950102 -11322549 + PB1 SINE Alu 77 125 -2 9 1225 394 252 54 9 chr17 83950108 83950220 -11322431 + BC1_Mm scRNA scRNA 3 119 -33 9 1225 1039 128 194 6 chr17 83950308 83950488 -11322163 + B3 SINE B2 3 216 0 9 1225 244 227 75 15 chr17 83950550 83950617 -11322034 - ID SINE ID -142 82 12 9 1225 1385 73 0 55 chr17 83951031 83951233 -11321418 - B2_Mm2 SINE B2 -3 192 2 9 1225 396 280 25 25 chr17 83951452 83951573 -11321078 - B1F SINE Alu -5 144 24 9 1225 761 212 0 14 chr17 83951760 83951899 -11320752 + B1_Mur2 SINE Alu 5 141 -8 9 1225 402 191 0 0 chr17 83951923 83951986 -11320665 + B3A SINE B2 1 63 -135 9 1225 399 271 33 62 chr17 83952521 83952661 -11319990 + B1F SINE Alu 10 142 -7 9 1225 342 0 0 0 chr17 83952718 83952756 -11319895 + (CA)n Simple_repeat Simple_repeat 2 39 0 9 1225 619 167 0 17 chr17 83953125 83953241 -11319410 + B1_Mus1 SINE Alu 35 148 0 9 1225 871 273 29 0 chr17 83953290 83953495 -11319156 + Lx8 LINE L1 6576 6786 -687 9 1225 627 182 0 0 chr17 83953495 83953621 -11319030 + (TA)n Simple_repeat Simple_repeat 2 127 0 9 1225 327 291 98 37 chr17 83953938 83954102 -11318549 - L1M5 LINE L1 -1489 4657 4484 9 1225 300 111 0 0 chr17 83954166 83954211 -11318440 + (CAT)n Simple_repeat Simple_repeat 1 45 0 9 1225 507 265 8 8 chr17 83954216 83954349 -11318302 - B1_Mur1 SINE Alu -16 133 1 9 1225 340 320 137 22 chr17 83954720 83954998 -11317653 - L1M5 LINE L1 -2093 4053 3744 9 1225 1025 330 59 41 chr17 83955357 83955869 -11316782 - MT2A LTR ERVL -10 523 3 9 1225 388 352 39 0 chr17 83955883 83956011 -11316640 + RSINE1 SINE B4 4 136 -29 9 1225 664 205 68 43 chr17 83956277 83956298 -11316353 + RMER15 LTR ERVL 409 429 -146 9 1225 3404 30 8 0 chr17 83956298 83956691 -11315960 + MTA_Mm LTR MaLR 1 396 0 9 1225 664 205 68 43 chr17 83956691 83956832 -11315819 + RMER15 LTR ERVL 430 575 0 9 1225 496 273 43 24 chr17 83957261 83957516 -11315135 - L1MC LINE L1 -2364 5518 5259 9 1225 925 245 122 4 chr17 83957650 83957896 -11314755 - B4A SINE B4 -8 284 10 9 1225 248 291 66 66 chr17 83957862 83957998 -11314653 - ID_B1 SINE B4 -22 202 67 9 1225 921 86 0 0 chr17 83958011 83958139 -11314512 + (TTCC)n Simple_repeat Simple_repeat 1 128 0 9 1225 1109 123 0 6 chr17 83958139 83958319 -11314332 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 9 1225 800 141 20 27 chr17 83958353 83958499 -11314152 - B1_Mus2 SINE Alu 0 147 3 9 1225 246 283 98 46 chr17 83958669 83958843 -11313808 - L1M5 LINE L1 -1080 5066 4884 9 1225 312 260 105 74 chr17 83959042 83959204 -11313447 - RLTR25A LTR ERVK 0 1103 937 9 1225 1317 111 11 0 chr17 83959594 83959783 -11312868 + B2_Mm1t SINE B2 3 193 0 9 1225 1237 48 0 0 chr17 83959800 83959947 -11312704 + B1_Mus1 SINE Alu 2 148 0 1 1225 333 0 0 0 chr17 83961007 83961044 -11311607 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1225 510 259 49 28 chr17 83961067 83961210 -11311441 - RSINE1 SINE B4 -17 148 3 1 1225 364 238 11 56 chr17 83961261 83961350 -11311301 + B1F SINE Alu 1 85 -64 1 1225 261 291 212 8 chr17 83961350 83961379 -11311272 + ID_B1 SINE B4 82 223 -1 1 1225 306 333 60 54 chr17 83961381 83961530 -11311121 - L1M5 LINE L1 -1563 4583 4434 9 1225 1975 166 43 61 chr17 83961542 83961933 -11310718 - ORR1C2 LTR MaLR 0 384 1 1 1225 23 0 0 0 chr17 83962355 83962378 -11310273 + AT_rich Low_complexity Low_complexity 1 23 0 1 1225 205 27 26 51 chr17 83962664 83962703 -11309948 + (CAA)n Simple_repeat Simple_repeat 2 39 0 1 1225 984 139 0 0 chr17 83962853 83962997 -11309654 - B1_Mus1 SINE Alu 0 148 5 1 1225 289 273 80 18 chr17 83963005 83963117 -11309534 - L1M2 LINE L1 -477 5823 5705 1 1225 242 29 29 0 chr17 83964305 83964340 -11308311 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 1 1225 585 0 0 0 chr17 83964424 83964489 -11308162 + (TTTC)n Simple_repeat Simple_repeat 4 68 0 1 1225 1642 31 5 0 chr17 83964527 83964718 -11307933 - B2_Mm1t SINE B2 0 193 2 1 1225 466 269 43 86 chr17 83965345 83965508 -11307143 - RSINE1 SINE B4 0 165 10 1 1225 461 288 19 6 chr17 83965615 83965806 -11306845 - L1MB1 LINE L1 -241 5927 5726 1 1225 747 253 100 0 chr17 83965897 83966087 -11306564 + ID_B1 SINE B4 15 223 -1 1 1225 782 277 94 41 chr17 83967336 83967581 -11305070 - B4 SINE B4 -27 265 8 1 1225 1665 190 84 20 chr17 83967585 83967940 -11304711 + ORR1C1 LTR MaLR 1 378 0 1 1225 223 381 0 32 chr17 83968038 83968195 -11304456 + (CCA)n Simple_repeat Simple_repeat 1 152 0 1 1225 286 345 0 11 chr17 83968816 83968907 -11303744 - PB1D10 SINE Alu -1 116 27 1 1225 349 265 73 3 chr17 83968920 83969022 -11303629 - B1F SINE Alu -1 116 1 1 1225 357 194 97 0 chr17 83969128 83969200 -11303451 + B1F SINE Alu 14 92 -57 1 1225 712 225 24 14 chr17 83969228 83969391 -11303260 + ID_B1 SINE B4 74 248 -44 1 1225 518 331 96 33 chr17 83969909 83970181 -11302470 + B4A SINE B4 3 291 -1 1 1225 381 353 37 8 chr17 83970301 83970435 -11302216 + RSINE1 SINE B4 21 158 -7 1 1225 324 70 0 0 chr17 83970444 83970487 -11302164 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1225 880 113 38 0 chr17 83971586 83971719 -11300932 + B1_Mur3 SINE Alu 1 138 -11 1 1225 180 0 0 0 chr17 83971719 83971739 -11300912 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 1225 504 0 0 0 chr17 83974209 83974265 -11298386 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 1225 297 0 0 0 chr17 83974265 83974297 -11298354 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1225 339 130 0 0 chr17 83975521 83975575 -11297076 + (ATGGTG)n Simple_repeat Simple_repeat 1 54 0 1 1225 1256 92 29 0 chr17 83975702 83975876 -11296775 + B2_Mm1t SINE B2 1 179 -14 1 1225 326 142 0 39 chr17 83976018 83976085 -11296566 + B2_Mm2 SINE B2 47 109 -107 1 1225 477 0 0 0 chr17 83976099 83976152 -11296499 + (TAAA)n Simple_repeat Simple_repeat 1 53 0 1 1225 286 248 35 129 chr17 83976966 83977082 -11295569 + PB1D7 SINE Alu 12 116 -4 1 1225 895 222 63 15 chr17 83977160 83977366 -11295285 - B3 SINE B2 0 216 1 1 1225 1145 279 137 40 chr17 83977926 83978453 -11294198 + RLTR20A2 LTR ERVK 1 578 0 1 1225 1622 37 16 0 chr17 83978574 83978765 -11293886 - B2_Mm2 SINE B2 -1 194 1 1 1225 785 217 70 6 chr17 83978926 83979084 -11293567 - B3A SINE B2 -30 168 1 1 1225 363 305 0 0 chr17 83979215 83979297 -11293354 - PB1D10 SINE Alu -10 107 26 1 1225 389 145 0 13 chr17 83979601 83979678 -11292973 + G-rich Low_complexity Low_complexity 1 76 0 1 1225 729 265 85 8 chr17 83980081 83980385 -11292266 + L1M4 LINE L1 3936 4256 -1890 1 1225 219 182 109 0 chr17 83980395 83980450 -11292201 - B2_Mm2 SINE B2 -120 75 15 1 1225 2278 120 71 25 chr17 83980767 83981161 -11291490 + MTC LTR MaLR 2 413 -8 1 1225 216 245 20 20 chr17 83981497 83981547 -11291104 + ID_B1 SINE B4 76 125 -99 1 1225 391 250 148 10 chr17 83981508 83981609 -11291042 + PB1D7 SINE Alu 6 120 0 1 1225 192 97 0 0 chr17 83981610 83981641 -11291010 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1225 225 132 241 19 chr17 83981748 83981802 -11290849 + ID4_ SINE ID 5 70 -13 1 1225 198 103 0 0 chr17 83981983 83982012 -11290639 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1225 443 100 14 0 chr17 83982211 83982281 -11290370 + (CA)n Simple_repeat Simple_repeat 1 71 0 1 1225 355 296 0 47 chr17 83982465 83982550 -11290101 + PB1D10 SINE Alu 3 83 -34 1 1225 621 165 0 0 chr17 83982552 83982643 -11290008 + B1_Mur2 SINE Alu 39 129 -20 1 1225 432 37 0 0 chr17 83982644 83982698 -11289953 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 1 1225 261 0 0 0 chr17 83982891 83982920 -11289731 + (TATG)n Simple_repeat Simple_repeat 1 29 0 1 1225 679 221 34 14 chr17 83982921 83983068 -11289583 - B3 SINE B2 -64 152 3 1 1225 396 257 149 7 chr17 83983628 83983769 -11288882 + RSINE1 SINE B4 3 163 -2 1 1225 856 142 28 0 chr17 83984004 83984145 -11288506 + B1_Mur3 SINE Alu 5 149 0 1 1225 315 0 0 0 chr17 83984462 83984497 -11288154 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1225 736 232 20 1 chr17 83984498 83984664 -11287987 - B3A SINE B2 -42 174 7 1 1225 455 271 8 17 chr17 83984685 83984805 -11287846 + PB1D7 SINE Alu 1 119 -1 1 1225 207 264 95 27 chr17 83985648 83985722 -11286929 + MIR3 SINE MIR 99 177 -31 1 1225 1013 209 16 10 chr17 83988393 83988586 -11284065 - B3 SINE B2 0 216 23 1 1225 231 409 60 8 chr17 83988676 83988809 -11283842 + Charlie17a DNA MER1_type 46 185 -34 1 1225 3854 59 2 17 chr17 83988870 83989352 -11283299 + MT2C_Mm LTR ERVL 1 475 0 1 1225 1199 36 0 0 chr17 83989454 83989592 -11283059 + B1_Mus1 SINE Alu 2 139 -9 1 1225 396 322 0 34 chr17 83989820 83989939 -11282712 + PB1D10 SINE Alu 3 117 0 1 1225 386 338 29 22 chr17 83989939 83989959 -11282692 + ID_B1 SINE B4 84 223 -1 1 1225 254 271 125 0 chr17 83991364 83991460 -11281191 + PB1 SINE Alu 4 111 -16 1 1225 366 261 0 98 chr17 83991819 83991900 -11280751 - B4A SINE B4 -197 95 22 1 1225 1035 175 97 5 chr17 83991900 83992107 -11280544 + URR1A DNA MER1_type 1 226 0 1 1225 366 261 0 98 chr17 83992107 83992127 -11280524 - B4A SINE B4 -271 21 4 1 1225 570 291 81 44 chr17 83993038 83993286 -11279365 + Cheshire DNA MER1_type 15 271 -2149 1 1225 1666 26 0 25 chr17 83993635 83993833 -11278818 - B2_Mm1a SINE B2 0 193 1 1 1225 3123 71 5 0 chr17 83994199 83994593 -11278058 + MTA_Mm LTR MaLR 1 396 0 1 1225 1539 94 154 18 chr17 83995958 83996230 -11276421 - MTB_Mm LTR MaLR -93 314 6 1 1225 1579 187 53 31 chr17 83997002 83997322 -11275329 - Lx2B LINE L1 -4 6996 6670 1 1225 1230 120 5 25 chr17 83997380 83997577 -11275074 - B2_Mm1a SINE B2 0 193 1 1 1225 249 237 108 70 chr17 83997581 83997767 -11274884 - L1ME2z LINE L1 -171 6273 6081 1 1225 923 291 21 18 chr17 83998069 83998352 -11274299 - B4A SINE B4 -6 286 3 1 1225 1107 181 120 46 chr17 83998459 83998746 -11273905 + ORR1A4 LTR MaLR 2 335 -59 1 1225 1628 32 21 0 chr17 83998746 83998935 -11273716 + B2_Mm1a SINE B2 1 193 0 1 1225 1094 214 64 137 chr17 83998935 83999016 -11273635 + ORR1A4 LTR MaLR 336 394 0 1 1225 694 233 117 31 chr17 83999018 83999275 -11273376 + L1MB2 LINE L1 5893 6171 0 1 1225 232 280 26 26 chr17 83999282 83999359 -11273292 - tRNA-Leu-CTA_ tRNA tRNA -4 81 5 1 1225 203 265 0 20 chr17 83999585 83999635 -11273016 + MIR SINE MIR 212 260 -2 1 1225 261 361 92 0 chr17 83999751 83999881 -11272770 + MLT1A1 LTR MaLR 23 164 -244 1 1225 533 194 10 10 chr17 84000890 84000994 -11271657 + PB1D10 SINE Alu 1 104 -13 1 1225 303 69 16 49 chr17 84000999 84001060 -11271591 + (GGGA)n Simple_repeat Simple_repeat 1 59 0 2 1225 466 139 95 10 chr17 84001402 84001514 -11271137 - B1_Mus2 SINE Alu 0 149 32 3 1225 291 346 39 0 chr17 84001841 84001945 -11270706 - MIR SINE MIR -47 215 108 4 1225 905 190 112 11 chr17 84002100 84002300 -11270351 - B3 SINE B2 -7 209 10 5 1225 2663 61 3 6 chr17 84003197 84003525 -11269126 + ORR1A2 LTR MaLR 1 327 0 6 1225 8113 164 44 71 chr17 84003525 84004607 -11268044 + ORR1A2-int LTR MaLR 1 1042 -921 6 1225 1341 97 11 11 chr17 84004607 84004795 -11267856 + B2_Mm2 SINE B2 2 189 -6 7 1225 8113 164 44 71 chr17 84004795 84005592 -11267059 + ORR1A2-int LTR MaLR 1043 1829 -134 6 1225 32 0 0 0 chr17 84005592 84005624 -11267027 + AT_rich Low_complexity Low_complexity 1 32 0 8 1225 1253 41 7 0 chr17 84005624 84005771 -11266880 - B1_Mus1 SINE Alu 0 148 1 9 1225 2090 148 32 16 chr17 84005982 84006354 -11266297 + ORR1A2 LTR MaLR 1 378 0 6 1225 207 194 0 0 chr17 84006475 84006511 -11266140 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1225 432 325 55 31 chr17 84006523 84006650 -11266001 + RSINE1 SINE B4 36 165 0 1 1225 546 118 0 0 chr17 84006915 84007008 -11265643 + (GA)n Simple_repeat Simple_repeat 2 94 0 1 1225 189 0 0 0 chr17 84007452 84007473 -11265178 + (GCTG)n Simple_repeat Simple_repeat 3 23 0 1 1225 310 251 72 6 chr17 84007648 84007747 -11264904 - B4 SINE B4 -62 103 1 1 1225 288 281 148 8 chr17 84008692 84008814 -11263837 + B1F SINE Alu 11 149 0 1 1225 637 108 18 18 chr17 84008820 84008933 -11263718 + (AGGGGG)n Simple_repeat Simple_repeat 5 117 0 1 1225 702 291 62 73 chr17 84008951 84009292 -11263359 - ORR1E LTR MaLR 0 359 23 1 1225 372 123 0 0 chr17 84009744 84009817 -11262834 + (TG)n Simple_repeat Simple_repeat 2 74 0 1 1225 267 306 28 0 chr17 84009826 84009898 -11262753 - B3A SINE B2 -22 176 103 1 1225 204 40 0 0 chr17 84010005 84010030 -11262621 + (GA)n Simple_repeat Simple_repeat 1 25 0 2 1225 933 92 113 0 chr17 84010030 84010172 -11262479 + B2_Mm2 SINE B2 38 195 0 2 1225 258 149 0 0 chr17 84010184 84010196 -11262455 + (A)n Simple_repeat Simple_repeat 1 12 0 2 1225 1151 82 0 20 chr17 84010196 84010346 -11262305 + B1_Mus2 SINE Alu 1 147 0 2 1225 258 149 0 0 chr17 84010346 84010380 -11262271 + (A)n Simple_repeat Simple_repeat 1 34 0 2 1225 570 231 19 0 chr17 84010391 84010495 -11262156 - B1_Mus2 SINE Alu -40 107 2 2 1225 367 313 79 58 chr17 84010495 84010522 -11262129 - B4 SINE B4 -83 181 68 2 1225 1035 222 9 5 chr17 84010654 84010867 -11261784 + B3 SINE B2 1 214 -2 2 1225 361 255 32 0 chr17 84010918 84011012 -11261639 + B1_Mur1 SINE Alu 48 144 -5 2 1225 357 252 62 18 chr17 84011115 84011228 -11261423 + B4A SINE B4 112 229 -63 2 1225 309 276 0 26 chr17 84011250 84011328 -11261323 + B4 SINE B4 217 292 0 2 1225 1164 176 59 0 chr17 84011393 84011597 -11261054 + B3 SINE B2 1 216 0 3 1225 1625 21 32 0 chr17 84011620 84011807 -11260844 + B2_Mm1t SINE B2 1 193 0 3 1225 1140 41 0 76 chr17 84011824 84011982 -11260669 + B1_Mus2 SINE Alu 2 147 0 3 1225 213 211 0 0 chr17 84011982 84012039 -11260612 + A-rich Low_complexity Low_complexity 1 57 0 3 1225 1484 92 0 5 chr17 84012078 84012274 -11260377 + B2_Mm2 SINE B2 1 195 0 3 1225 236 371 0 0 chr17 84012301 84012363 -11260288 + (CG)n Simple_repeat Simple_repeat 2 63 0 3 1225 223 180 49 45 chr17 84012726 84012737 -11259914 + B1F1 SINE Alu 2 28 -121 3 1225 245 119 71 0 chr17 84012737 84012779 -11259872 + ID_B1 SINE B4 95 139 -85 3 1225 223 180 49 45 chr17 84012779 84012793 -11259858 + B1F1 SINE Alu 29 69 -80 3 1225 336 287 37 56 chr17 84012835 84012942 -11259709 - PB1D7 SINE Alu 0 120 16 3 1225 3361 43 5 2 chr17 84013889 84014284 -11258367 + MTA_Mm LTR MaLR 1 396 0 3 1225 213 39 0 0 chr17 84014342 84014368 -11258283 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 1225 493 278 51 32 chr17 84014379 84014535 -11258116 - RSINE1 SINE B4 -4 161 3 4 1225 579 243 7 18 chr17 84014685 84014827 -11257824 - B1F1 SINE Alu -5 145 1 4 1225 203 235 0 0 chr17 84014901 84014952 -11257699 + C-rich Low_complexity Low_complexity 1 51 0 4 1225 400 292 8 55 chr17 84014952 84015079 -11257572 - ID_B1 SINE B4 -8 216 96 4 1225 383 274 40 103 chr17 84016066 84016241 -11256410 + MT2B LTR ERVL 101 264 -337 4 1225 995 33 0 16 chr17 84016154 84016278 -11256373 + B1_Mm SINE Alu 26 147 0 4 1225 282 53 35 35 chr17 84016278 84016336 -11256315 + (TAAA)n Simple_repeat Simple_repeat 3 60 0 4 1225 684 274 48 102 chr17 84016373 84016666 -11255985 - B4A SINE B4 -1 291 15 4 1225 324 304 17 9 chr17 84016722 84016838 -11255813 + ID_B1 SINE B4 107 223 -1 4 1225 224 248 110 37 chr17 84016959 84017068 -11255583 + PB1D10 SINE Alu 1 117 0 5 1226 262 320 70 8 chr17 84017251 84017380 -11255271 - Charlie2b DNA MER1_type -880 1902 1766 5 1226 454 211 9 63 chr17 84017470 84017581 -11255070 + B1F2 SINE Alu 5 109 -40 5 1226 803 232 81 53 chr17 84017584 84017793 -11254858 + B4A SINE B4 5 219 -73 5 1226 244 266 84 127 chr17 84017828 84017844 -11254807 - B4A SINE B4 -84 208 198 5 1226 402 85 0 0 chr17 84017844 84017903 -11254748 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1226 436 139 0 27 chr17 84017903 84017977 -11254674 - PB1D9 SINE Alu -14 106 35 5 1226 244 266 84 127 chr17 84017977 84018028 -11254623 - B4A SINE B4 -95 197 73 5 1226 940 236 25 5 chr17 84018033 84018233 -11254418 - B3 SINE B2 -12 204 1 5 1226 1270 41 0 0 chr17 84018324 84018470 -11254181 + B1_Mus2 SINE Alu 2 147 0 5 1226 447 345 18 6 chr17 84018641 84018807 -11253844 + ID_B1 SINE B4 2 169 -55 5 1226 380 269 19 9 chr17 84018730 84018835 -11253816 + PB1D7 SINE Alu 13 118 -2 6 1226 788 250 28 17 chr17 84018837 84019016 -11253635 + B3A SINE B2 2 182 -16 6 1226 396 289 50 86 chr17 84019029 84019169 -11253482 - B3A SINE B2 -5 193 59 6 1226 1553 52 0 10 chr17 84019186 84019379 -11253272 + B2_Mm2 SINE B2 2 192 -3 6 1226 297 109 0 0 chr17 84019382 84019428 -11253223 + (GGA)n Simple_repeat Simple_repeat 2 47 0 6 1226 21 36 0 0 chr17 84019467 84019495 -11253156 + AT_rich Low_complexity Low_complexity 1 28 0 6 1226 329 262 83 0 chr17 84019495 84019579 -11253072 - Charlie1a DNA MER1_type -406 1049 959 6 1226 278 255 103 0 chr17 84019730 84019829 -11252822 - B1F SINE Alu -29 120 13 6 1226 505 329 109 19 chr17 84019837 84020150 -11252501 - Charlie1a DNA MER1_type -794 661 321 6 1226 277 213 0 0 chr17 84020421 84020468 -11252183 - PB1D7 SINE Alu -65 55 9 6 1226 237 322 0 0 chr17 84020468 84020480 -11252171 - ID_B1 SINE B4 -88 136 78 6 1226 461 295 50 14 chr17 84020564 84020705 -11251946 - RSINE1 SINE B4 -2 163 18 7 1226 392 283 80 80 chr17 84020710 84020731 -11251920 - CYRA11_Mm Unknown Y-chromosome -250 367 201 7 1226 894 137 86 80 chr17 84020731 84020871 -11251780 + URR1A DNA MER1_type 51 194 -32 7 1226 1240 28 7 7 chr17 84020871 84021017 -11251634 + B1_Mus2 SINE Alu 1 146 -1 7 1226 198 0 0 0 chr17 84021018 84021040 -11251611 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 7 1226 894 137 86 80 chr17 84021040 84021072 -11251579 + URR1A DNA MER1_type 195 226 0 7 1226 1256 41 0 14 chr17 84021473 84021621 -11251030 + B1_Mm SINE Alu 2 147 0 7 1226 198 0 0 0 chr17 84021624 84021646 -11251005 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 7 1226 371 276 28 9 chr17 84021717 84021823 -11250828 + B1F SINE Alu 39 146 -3 7 1226 183 42 0 0 chr17 84021864 84021888 -11250763 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1226 1141 51 0 0 chr17 84021888 84022025 -11250626 - B1_Mm SINE Alu -10 137 1 8 1226 760 176 24 0 chr17 84022029 84022154 -11250497 + B1_Mur1 SINE Alu 15 142 -7 8 1226 225 0 0 0 chr17 84022156 84022181 -11250470 + (TAAAA)n Simple_repeat Simple_repeat 5 29 0 8 1226 22 0 0 0 chr17 84022249 84022271 -11250380 + AT_rich Low_complexity Low_complexity 1 22 0 8 1226 564 228 26 0 chr17 84022282 84022396 -11250255 + PB1D9 SINE Alu 4 120 0 8 1226 183 154 0 0 chr17 84022396 84022416 -11250235 + A-rich Low_complexity Low_complexity 1 20 0 8 1226 1377 59 37 16 chr17 84022416 84022605 -11250046 + B2_Mm2 SINE B2 2 194 -1 8 1226 183 154 0 0 chr17 84022605 84022623 -11250028 + A-rich Low_complexity Low_complexity 21 38 0 8 1226 201 219 51 64 chr17 84022824 84022902 -11249749 - MIR SINE MIR -69 193 117 8 1226 275 294 9 39 chr17 84022953 84023060 -11249591 + B1F1 SINE Alu 10 141 -8 8 1226 1158 89 0 0 chr17 84023236 84023382 -11249269 - B1_Mus2 SINE Alu 0 147 2 9 1226 464 179 245 0 chr17 84023393 84023499 -11249152 - ID_B1 SINE B4 -7 217 86 9 1226 324 0 0 0 chr17 84023902 84023938 -11248713 + (TG)n Simple_repeat Simple_repeat 1 36 0 9 1226 306 0 0 0 chr17 84023938 84023971 -11248680 + (GA)n Simple_repeat Simple_repeat 1 34 0 9 1226 249 269 0 0 chr17 84024064 84024116 -11248535 + (CACG)n Simple_repeat Simple_repeat 1 52 0 9 1226 226 293 173 48 chr17 84024141 84024245 -11248406 - MamGypLTR2c LTR Gypsy -589 479 363 9 1226 361 330 0 0 chr17 84024430 84024530 -11248121 + PB1D10 SINE Alu 3 102 -15 9 1226 220 224 17 33 chr17 84024599 84024659 -11247992 + PB1D10 SINE Alu 37 95 -22 9 1226 981 190 13 62 chr17 84025550 84025775 -11246876 - B3 SINE B2 0 216 3 9 1226 1145 88 0 7 chr17 84025794 84025942 -11246709 - B1_Mus1 SINE Alu 0 148 2 9 1226 242 222 93 40 chr17 84027270 84027345 -11245306 - ID2 SINE ID -3 80 2 1 1226 277 193 188 27 chr17 84027371 84027483 -11245168 - B1F SINE Alu -15 134 5 1 1226 206 316 88 39 chr17 84027635 84027737 -11244914 + L2c LINE L2 2971 3077 -310 1 1226 186 43 0 0 chr17 84027937 84027960 -11244691 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1 1226 717 83 104 8 chr17 84027961 84028095 -11244556 - RMER17B LTR ERVK -495 463 317 1 1226 185 47 0 85 chr17 84030232 84030279 -11242372 + (CGGA)n Simple_repeat Simple_repeat 1 43 0 1 1226 39 88 0 0 chr17 84030962 84031064 -11241587 + GC_rich Low_complexity Low_complexity 1 102 0 1 1226 212 300 0 70 chr17 84031287 84031459 -11241192 + C-rich Low_complexity Low_complexity 4 163 0 1 1226 306 0 0 0 chr17 84033009 84033043 -11239608 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 1 1226 254 29 29 0 chr17 84033674 84033709 -11238942 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 1226 365 252 192 10 chr17 84034021 84034125 -11238526 + ID_B1 SINE B4 3 125 -99 1 1226 288 365 39 0 chr17 84034188 84034292 -11238359 + MIRb SINE MIR 92 199 -69 1 1226 488 299 94 79 chr17 84034798 84034983 -11237668 + B4A SINE B4 1 175 -117 1 1226 2397 137 65 13 chr17 84034983 84035369 -11237282 + MTB_Mm LTR MaLR 2 407 0 1 1226 478 299 94 79 chr17 84035369 84035448 -11237203 + B4 SINE B4 176 269 -23 1 1226 217 250 0 18 chr17 84035483 84035540 -11237111 + (CATATA)n Simple_repeat Simple_repeat 1 56 0 1 1226 350 290 100 33 chr17 84035598 84035748 -11236903 + B4 SINE B4 65 224 -68 1 1226 674 164 82 0 chr17 84035627 84035749 -11236902 + B1_Mur4 SINE Alu 19 150 0 1 1226 189 74 0 0 chr17 84036052 84036079 -11236572 + (CCCCCA)n Simple_repeat Simple_repeat 3 29 0 1 1226 1003 185 70 5 chr17 84036820 84037021 -11235630 + B3 SINE B2 3 216 0 1 1226 972 77 31 0 chr17 84037094 84037224 -11235427 + B2_Mm2 SINE B2 2 135 -60 1 1226 207 0 0 0 chr17 84037227 84037250 -11235401 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 1226 379 352 0 0 chr17 84037274 84037382 -11235269 + PB1D10 SINE Alu 1 108 -9 1 1226 356 325 17 50 chr17 84037567 84037687 -11234964 + RSINE1 SINE B4 1 116 -49 1 1226 274 312 45 50 chr17 84037747 84037926 -11234725 + (TG)n Simple_repeat Simple_repeat 2 179 0 1 1226 1193 48 7 7 chr17 84038144 84038290 -11234361 + B1_Mm SINE Alu 2 147 0 1 1226 250 254 63 0 chr17 84038348 84038411 -11234240 - ID4_ SINE ID -12 71 5 1 1226 189 0 0 0 chr17 84038584 84038605 -11234046 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 1226 381 261 71 50 chr17 84038617 84038693 -11233958 + B4 SINE B4 1 77 -215 1 1226 900 89 184 6 chr17 84038693 84038851 -11233800 + B2_Mm2 SINE B2 3 188 -7 1 1226 425 121 0 0 chr17 84038857 84038915 -11233736 + B1_Mur4 SINE Alu 3 60 -90 1 1226 585 301 11 60 chr17 84038965 84039149 -11233502 + B4A SINE B4 118 292 0 1 1226 311 284 155 0 chr17 84039226 84039342 -11233309 + L1MC1 LINE L1 6085 6218 -115 1 1226 1200 68 0 0 chr17 84039421 84039567 -11233084 + B1_Mus1 SINE Alu 3 148 0 1 1226 380 253 88 0 chr17 84040255 84040346 -11232305 + PB1D10 SINE Alu 1 99 -18 1 1226 333 287 174 0 chr17 84040346 84040370 -11232281 + ID_B1 SINE B4 82 216 -8 1 1226 1163 75 0 26 chr17 84040569 84040720 -11231931 + B1_Mm SINE Alu 1 147 0 1 1226 258 56 0 0 chr17 84040986 84041022 -11231629 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1226 189 0 0 0 chr17 84041187 84041208 -11231443 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 1 1226 1074 98 0 0 chr17 84041209 84041352 -11231299 - B1_Mus1 SINE Alu -2 146 4 1 1226 436 231 56 32 chr17 84041554 84041679 -11230972 - RSINE1 SINE B4 -36 129 2 1 1226 271 311 47 122 chr17 84041721 84041737 -11230914 - B4 SINE B4 -69 223 208 1 1226 2513 86 3 3 chr17 84041737 84042064 -11230587 - ORR1A2 LTR MaLR 0 327 1 1 1226 582 240 8 39 chr17 84042064 84042176 -11230475 - B1_Mur2 SINE Alu -14 135 23 1 1226 248 255 58 218 chr17 84042085 84042291 -11230360 - MT2B LTR ERVL -337 264 92 1 1226 271 311 47 122 chr17 84042176 84042219 -11230432 - B4 SINE B4 -85 207 65 1 1226 258 229 21 10 chr17 84043234 84043331 -11229320 + CT-rich Low_complexity Low_complexity 3 100 0 1 1226 501 260 23 30 chr17 84043349 84043480 -11229171 - B1F1 SINE Alu -10 139 10 1 1226 427 314 12 66 chr17 84043480 84043516 -11229135 - ID_B1 SINE B4 -10 214 57 1 1226 1028 112 0 0 chr17 84043550 84043693 -11228958 - B1_Mur4 SINE Alu -7 143 1 1 1226 289 215 215 0 chr17 84043855 84043920 -11228731 - ID4 SINE ID 0 83 5 1 1226 391 260 14 0 chr17 84043960 84044054 -11228597 - B1F SINE Alu 0 120 18 1 1226 289 333 10 30 chr17 84043973 84044072 -11228579 - ID_B1 SINE B4 -48 176 80 1 1226 419 0 20 0 chr17 84044086 84044137 -11228514 + (TAG)n Simple_repeat Simple_repeat 1 52 0 1 1226 406 282 6 89 chr17 84044146 84044325 -11228326 - RSINE1 SINE B4 0 165 2 1 1226 335 306 75 81 chr17 84044343 84044517 -11228134 + MER58B DNA MER1_type 152 324 -17 1 1226 663 13 0 0 chr17 84044573 84044649 -11228002 + (CA)n Simple_repeat Simple_repeat 2 77 0 1 1226 935 163 0 0 chr17 84045069 84045216 -11227435 - B1_Mur4 SINE Alu -2 148 2 1 1226 396 55 0 0 chr17 84045352 84045407 -11227244 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1 1226 1181 37 0 0 chr17 84045408 84045543 -11227108 - B1_Mus2 SINE Alu -12 135 1 1 1226 544 286 13 82 chr17 84046131 84046363 -11226288 - ID_B1 SINE B4 -5 219 4 1 1226 743 99 0 56 chr17 84046430 84046654 -11225997 + (ACTG)n Simple_repeat Simple_repeat 1 211 0 1 1226 569 282 49 0 chr17 84046674 84046816 -11225835 - RSINE1 SINE B4 -16 149 1 1 1226 278 264 79 70 chr17 84046816 84046930 -11225721 - PB1D7 SINE Alu -1 119 5 1 1226 345 24 0 0 chr17 84047219 84047261 -11225390 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1226 1703 39 0 0 chr17 84047567 84047773 -11224878 + L1Md_A LINE L1 6376 6581 -1 1 1226 783 62 70 18 chr17 84047936 84048050 -11224601 - ORR1A2 LTR MaLR 0 327 208 1 1226 1215 62 0 0 chr17 84048065 84048211 -11224440 - B1_Mus2 SINE Alu 0 147 2 1 1226 463 224 36 27 chr17 84048220 84048330 -11224321 - PB1D10 SINE Alu -5 112 2 1 1226 198 0 0 0 chr17 84048447 84048469 -11224182 + (TC)n Simple_repeat Simple_repeat 2 23 0 1 1226 74 23 0 0 chr17 84048484 84048572 -11224079 + AT_rich Low_complexity Low_complexity 1 88 0 1 1226 286 244 61 0 chr17 84048589 84048720 -11223931 + (CATATA)n Simple_repeat Simple_repeat 4 142 0 1 1226 387 120 80 0 chr17 84048871 84048966 -11223685 + RLTR33 LTR ERVK 1 183 -495 1 1226 1111 236 44 28 chr17 84048968 84049286 -11223365 - Lx9 LINE L1 -212 7432 7110 1 1226 307 306 62 9 chr17 84049286 84049316 -11223335 + L1MC3 LINE L1 6718 6748 -1037 1 1226 216 0 0 0 chr17 84049316 84049340 -11223311 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1226 307 306 62 9 chr17 84049340 84049421 -11223230 + L1MC3 LINE L1 6749 6834 -951 1 1226 1971 92 20 113 chr17 84049497 84049607 -11223044 + ORR1A1 LTR MaLR 15 121 -225 1 1226 1143 64 7 0 chr17 84049607 84049748 -11222903 + B1_Mus2 SINE Alu 1 142 -5 1 1226 1971 92 20 113 chr17 84049748 84049982 -11222669 + ORR1A1 LTR MaLR 122 327 -19 1 1226 852 199 76 6 chr17 84049989 84050161 -11222490 + ID_B1 SINE B4 41 224 0 1 1226 461 194 31 117 chr17 84050279 84050380 -11222271 + L1MC3 LINE L1 6987 7084 -701 1 1226 297 281 8 109 chr17 84050380 84050508 -11222143 + PB1D7 SINE Alu 1 115 -5 1 1226 461 194 31 117 chr17 84050508 84050569 -11222082 + L1MC3 LINE L1 7085 7135 -650 1 1226 260 226 204 92 chr17 84050570 84050700 -11221951 - B1F SINE Alu -2 147 6 1 1226 592 266 39 8 chr17 84051402 84051531 -11221120 - ID_B1 SINE B4 0 224 92 1 1226 1253 103 16 0 chr17 84052275 84052459 -11220192 + B2_Mm1t SINE B2 2 188 -5 1 1226 28 0 0 0 chr17 84052666 84052694 -11219957 + AT_rich Low_complexity Low_complexity 1 28 0 1 1226 492 228 0 95 chr17 84052789 84052915 -11219736 + B3A SINE B2 75 188 -10 1 1226 419 211 71 31 chr17 84052921 84053013 -11219638 + B1_Mur1 SINE Alu 43 139 -10 1 1226 642 224 6 87 chr17 84053013 84053174 -11219477 + B1_Mur2 SINE Alu 2 149 0 1 1226 1042 110 7 0 chr17 84053293 84053438 -11219213 + B2_Mm1t SINE B2 15 160 -33 1 1226 1080 82 0 0 chr17 84053459 84053594 -11219057 + B1_Mus2 SINE Alu 1 135 -12 1 1226 235 347 0 26 chr17 84053603 84053680 -11218971 + B4A SINE B4 218 292 0 1 1226 370 299 42 42 chr17 84054282 84054425 -11218226 + B1F1 SINE Alu 2 144 -5 1 1226 326 274 188 0 chr17 84054784 84054803 -11217848 - B1F SINE Alu -10 139 1 1 1226 357 276 112 0 chr17 84054803 84054901 -11217750 - ID_B1 SINE B4 -34 190 82 1 1226 743 143 15 0 chr17 84054970 84055103 -11217548 + CT-rich Low_complexity Low_complexity 4 138 0 1 1226 522 122 85 0 chr17 84055106 84055188 -11217463 - B1_Mur4 SINE Alu 0 150 62 1 1226 1044 127 60 22 chr17 84055406 84055591 -11217060 + B2_Mm2 SINE B2 1 192 -3 1 1226 338 270 29 20 chr17 84055743 84055845 -11216806 + B4A SINE B4 31 133 -159 1 1226 312 303 52 104 chr17 84055744 84055917 -11216734 + B3A SINE B2 33 196 -2 1 1226 1139 56 14 7 chr17 84055922 84056067 -11216584 + B1_Mus2 SINE Alu 2 147 0 1 1226 371 310 8 89 chr17 84056088 84056161 -11216490 + RSINE1 SINE B4 28 91 -74 1 1226 1325 95 11 5 chr17 84056161 84056351 -11216300 - B2_Mm1t SINE B2 -1 192 2 1 1226 373 310 8 89 chr17 84056351 84056401 -11216250 + RSINE1 SINE B4 92 141 -24 1 1226 339 78 0 0 chr17 84056432 84056483 -11216168 + (TC)n Simple_repeat Simple_repeat 1 51 0 1 1226 29 28 0 0 chr17 84056511 84056547 -11216104 + AT_rich Low_complexity Low_complexity 1 36 0 1 1226 457 294 8 16 chr17 84056552 84056673 -11215978 + PB1D7 SINE Alu 1 120 0 2 1226 413 281 10 10 chr17 84056698 84056795 -11215856 + PB1D10 SINE Alu 1 97 -20 2 1226 527 155 0 0 chr17 84057397 84057481 -11215170 + BC1_Mm scRNA scRNA 1 84 -68 2 1226 192 40 0 0 chr17 84057674 84057699 -11214952 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 2 1226 1085 71 50 0 chr17 84057874 84058014 -11214637 + B1_Mm SINE Alu 1 147 0 2 1226 555 16 0 0 chr17 84058087 84058151 -11214500 + (GA)n Simple_repeat Simple_repeat 1 64 0 2 1226 301 250 47 0 chr17 84058157 84058221 -11214430 - B3 SINE B2 -74 142 76 2 1226 558 126 0 0 chr17 84058618 84058721 -11213930 + (TG)n Simple_repeat Simple_repeat 2 104 0 2 1226 799 182 14 0 chr17 84059743 84059891 -11212760 - B1_Mur4 SINE Alu 0 150 1 2 1226 2332 94 3 3 chr17 84059974 84060295 -11212356 - ORR1A4 LTR MaLR -8 321 1 2 1226 513 168 0 0 chr17 84060688 84060795 -11211856 + (CA)n Simple_repeat Simple_repeat 2 108 0 2 1226 23 0 0 0 chr17 84061272 84061295 -11211356 + AT_rich Low_complexity Low_complexity 1 23 0 2 1226 1183 56 0 0 chr17 84061383 84061526 -11211125 - B1_Mm SINE Alu 0 147 5 2 1226 252 0 0 0 chr17 84061884 84061912 -11210739 + (T)n Simple_repeat Simple_repeat 1 28 0 2 1226 843 169 256 0 chr17 84062054 84062226 -11210425 + B3 SINE B2 1 216 0 2 1226 238 237 0 106 chr17 84062245 84062293 -11210358 - PB1D10 SINE Alu -7 110 67 2 1226 4038 150 39 13 chr17 84062293 84062995 -11209656 - RMER6D LTR ERVK 0 720 1 2 1226 238 237 0 106 chr17 84062995 84063012 -11209639 - PB1D10 SINE Alu -51 66 52 2 1226 1930 50 241 0 chr17 84063056 84063376 -11209275 + RLTR47_MM LTR ERV1 1 397 -135 2 1226 261 0 0 0 chr17 84063397 84063426 -11209225 + (A)n Simple_repeat Simple_repeat 1 29 0 2 1226 198 0 0 0 chr17 84063495 84063517 -11209134 + (TCTG)n Simple_repeat Simple_repeat 3 24 0 2 1226 799 70 17 25 chr17 84063634 84063752 -11208899 - B2_Mm2 SINE B2 -78 117 1 2 1226 1233 14 21 0 chr17 84063862 84064005 -11208646 + B1_Mus1 SINE Alu 2 147 -1 2 1226 291 114 0 0 chr17 84064007 84064051 -11208600 + (A)n Simple_repeat Simple_repeat 1 44 0 2 1226 1142 164 92 9 chr17 84064408 84064634 -11208017 - ORR1C2 LTR MaLR 0 384 140 2 1226 251 269 59 15 chr17 84064634 84064702 -11207949 + ID4 SINE ID 2 72 -11 2 1226 550 227 237 24 chr17 84064702 84064715 -11207936 + B4 SINE B4 2 23 -201 2 1226 285 136 41 96 chr17 84064715 84064788 -11207863 + PB1D10 SINE Alu 49 117 0 2 1226 550 227 237 24 chr17 84064788 84064899 -11207752 + B4 SINE B4 24 224 0 2 1226 921 73 24 0 chr17 84064791 84064915 -11207736 + B1_Mus1 SINE Alu 1 127 -21 2 1226 353 241 34 11 chr17 84065239 84065327 -11207324 + RSINE1 SINE B4 4 93 -72 2 1226 325 280 29 20 chr17 84065510 84065612 -11207039 + B4A SINE B4 31 133 -159 2 1226 315 297 52 104 chr17 84065511 84065684 -11206967 + B3A SINE B2 33 196 -2 2 1226 1216 55 0 0 chr17 84065689 84065835 -11206816 + B1_Mus2 SINE Alu 2 147 0 2 1226 185 35 0 65 chr17 84065835 84065866 -11206785 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1226 251 172 16 65 chr17 84065899 84065961 -11206690 + GA-rich Low_complexity Low_complexity 3 61 0 2 1226 871 141 0 7 chr17 84066348 84066484 -11206167 - B2_Mm1a SINE B2 -1 192 58 2 1226 285 227 104 26 chr17 84066653 84066730 -11205921 + B3 SINE B2 44 126 -90 2 1226 653 192 0 53 chr17 84066695 84066827 -11205824 + B1F2 SINE Alu 20 144 -5 2 1226 301 222 0 169 chr17 84066828 84066958 -11205693 + MT2B LTR ERVL 150 257 -344 2 1226 724 175 15 31 chr17 84066870 84067000 -11205651 + B1_Mur4 SINE Alu 22 149 -1 2 1226 1262 34 0 0 chr17 84067004 84067151 -11205500 + B1_Mus1 SINE Alu 2 148 0 2 1226 201 147 0 0 chr17 84067151 84067185 -11205466 + (A)n Simple_repeat Simple_repeat 1 34 0 2 1226 2580 95 42 97 chr17 84067323 84067778 -11204873 + RLTR23 LTR ERV1 1 430 0 2 1226 486 32 0 0 chr17 84068133 84068196 -11204455 + L1_Mus1 LINE L1 6502 6564 -3 2 1226 1155 76 7 0 chr17 84068206 84068351 -11204300 + B1_Mus2 SINE Alu 1 146 -1 2 1226 300 53 0 0 chr17 84068351 84068389 -11204262 + (TTAA)n Simple_repeat Simple_repeat 3 40 0 2 1226 593 302 51 60 chr17 84068395 84068586 -11204065 + B3 SINE B2 1 194 -22 2 1226 1111 83 0 14 chr17 84068586 84068732 -11203919 + B1_Mus2 SINE Alu 2 145 -2 2 1226 593 302 51 60 chr17 84068732 84068755 -11203896 + B3 SINE B2 195 213 -3 2 1226 414 0 0 0 chr17 84069518 84069564 -11203087 + (CTATG)n Simple_repeat Simple_repeat 2 47 0 2 1226 984 125 0 0 chr17 84069642 84069778 -11202873 - B1_Mus1 SINE Alu -10 138 3 2 1226 600 254 39 82 chr17 84069779 84070008 -11202643 - B3 SINE B2 -1 215 4 2 1226 311 209 82 50 chr17 84070011 84070104 -11202547 - B1F SINE Alu -3 146 25 2 1226 879 154 21 0 chr17 84070354 84070497 -11202154 - B1_Mus1 SINE Alu -2 146 1 2 1226 184 355 0 26 chr17 84070497 84070610 -11202041 - L2a LINE L2 -247 3179 3070 2 1226 546 241 36 98 chr17 84070873 84071066 -11201585 + B3A SINE B2 2 182 -16 2 1226 268 189 0 26 chr17 84071073 84071149 -11201502 + (CATATA)n Simple_repeat Simple_repeat 6 79 0 2 1226 783 160 0 18 chr17 84071178 84071411 -11201240 + (CA)n Simple_repeat Simple_repeat 1 228 0 2 1226 732 175 41 9 chr17 84071419 84071564 -11201087 + B1_Mus1 SINE Alu 3 150 0 2 1226 425 284 9 9 chr17 84071582 84071692 -11200959 + B1F SINE Alu 29 138 -11 2 1226 409 197 214 32 chr17 84071744 84071870 -11200781 + B1F2 SINE Alu 1 149 0 2 1226 580 283 76 0 chr17 84071887 84072032 -11200619 + RSINE1 SINE B4 8 163 -2 2 1226 228 256 221 107 chr17 84072397 84072410 -11200241 + ID_B1 SINE B4 76 218 -3 2 1226 332 278 17 61 chr17 84072410 84072525 -11200126 + PB1D9 SINE Alu 5 114 -6 2 1226 207 125 0 0 chr17 84072553 84072593 -11200058 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 2 1226 242 257 0 0 chr17 84072734 84072808 -11199843 + L1M2 LINE L1 2163 2236 -4613 2 1226 1130 82 0 0 chr17 84072814 84072960 -11199691 + B1_Mus1 SINE Alu 2 147 -1 2 1226 193 28 111 0 chr17 84072965 84073001 -11199650 + (CAAA)n Simple_repeat Simple_repeat 3 42 0 2 1226 287 175 18 0 chr17 84073010 84073067 -11199584 + L1_Mm LINE L1 1613 1670 -4213 2 1226 643 255 56 36 chr17 84073059 84073397 -11199254 + L1M2 LINE L1 3268 3613 -3229 2 1226 1201 74 0 0 chr17 84073414 84073562 -11199089 + B1_Mus1 SINE Alu 1 148 0 2 1226 273 29 0 0 chr17 84073564 84073598 -11199053 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 2 1226 375 188 44 66 chr17 84073675 84073766 -11198885 + B4A SINE B4 81 169 -123 2 1226 625 119 18 44 chr17 84073693 84073796 -11198855 + PB1D9 SINE Alu 10 111 -9 2 1226 180 77 0 0 chr17 84073796 84073822 -11198829 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2 1226 2474 292 72 31 chr17 84073832 84074690 -11197961 + L1M2 LINE L1 3885 4805 -2037 2 1226 1197 68 0 0 chr17 84074690 84074837 -11197814 - B1_Mus2 SINE Alu 0 147 1 2 1226 2474 292 72 31 chr17 84074837 84075025 -11197626 + L1M2 LINE L1 4806 4979 -1863 2 1226 1050 73 7 0 chr17 84075025 84075161 -11197490 + B1_Mus1 SINE Alu 2 138 -10 2 1226 265 0 24 48 chr17 84075161 84075203 -11197448 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 2 1226 2474 292 72 31 chr17 84075203 84075266 -11197385 + L1M2 LINE L1 4980 5041 -1801 2 1226 858 232 46 46 chr17 84075296 84075558 -11197093 + RLTR14 LTR ERV1 7 268 -114 2 1226 228 209 0 0 chr17 84075558 84075649 -11197002 + T-rich Low_complexity Low_complexity 1 91 0 2 1226 1108 62 7 27 chr17 84075651 84075800 -11196851 - B1_Mus2 SINE Alu 0 147 2 2 1226 1291 96 10 26 chr17 84075801 84075993 -11196658 - B2_Mm1t SINE B2 -3 190 2 2 1226 466 123 0 0 chr17 84075993 84076058 -11196593 + RLTR14 LTR ERV1 316 380 -2 2 1226 1335 104 10 20 chr17 84076123 84076320 -11196331 + B2_Mm2 SINE B2 1 195 0 2 1226 488 266 0 9 chr17 84076321 84076431 -11196220 + B1_Mur4 SINE Alu 1 109 -41 2 1226 607 281 6 51 chr17 84076418 84076594 -11196057 - RMER10B LTR ERVL -43 355 188 2 1226 1100 224 43 20 chr17 84076565 84076619 -11196032 - RMER10B LTR ERVL -133 265 209 2 1226 1164 62 7 0 chr17 84076619 84076765 -11195886 + B1_Mus2 SINE Alu 1 147 0 2 1226 1100 224 43 20 chr17 84076765 84076965 -11195686 - RMER10B LTR ERVL -190 208 5 2 1226 376 65 15 46 chr17 84076962 84077027 -11195624 + B1_Mur4 SINE Alu 88 150 0 2 1226 590 246 53 38 chr17 84077080 84077211 -11195440 + B1_Mur2 SINE Alu 17 149 0 2 1226 1441 69 21 0 chr17 84077271 84077460 -11195191 + B2_Mm1a SINE B2 1 193 0 2 1226 374 294 60 18 chr17 84077462 84077628 -11195023 + L1M2 LINE L1 5186 5358 -1484 2 1226 3461 181 37 38 chr17 84077754 84078433 -11194218 + RLTR33 LTR ERVK 1 678 0 2 1226 928 167 0 20 chr17 84078473 84078626 -11194025 - B1_Mur4 SINE Alu 0 150 1 2 1226 1609 276 27 36 chr17 84078626 84079183 -11193468 + L1M2 LINE L1 5376 5927 -918 2 1226 1103 112 61 11 chr17 84079226 84079247 -11193404 - B2_Mm1t SINE B2 -1 192 162 2 1226 237 65 0 0 chr17 84079247 84079278 -11193373 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 2 1226 1124 103 0 13 chr17 84079278 84079437 -11193214 - B2_Mm2 SINE B2 -32 161 3 2 1226 380 228 43 9 chr17 84079445 84079560 -11193091 + L1_Mur3 LINE L1 5313 5431 -449 2 1226 252 356 59 0 chr17 84079561 84079662 -11192989 + B4 SINE B4 73 179 -113 2 1226 278 215 22 122 chr17 84079577 84079667 -11192984 + MT2B LTR ERVL 168 248 -353 2 1226 470 204 11 0 chr17 84079593 84079686 -11192965 + B1_Mur3 SINE Alu 22 115 -34 2 1226 305 277 24 40 chr17 84079713 84079837 -11192814 + L1M2 LINE L1 6207 6328 -686 2 1226 251 193 158 0 chr17 84079857 84079914 -11192737 - B1_Mur2 SINE Alu -3 146 81 2 1226 629 224 0 29 chr17 84079976 84080114 -11192537 + B1F SINE Alu 1 134 -15 2 1226 1069 68 6 64 chr17 84080137 84080293 -11192358 + B1_Mus2 SINE Alu 1 147 0 2 1226 183 139 0 0 chr17 84080293 84080329 -11192322 + (A)n Simple_repeat Simple_repeat 1 36 0 2 1226 255 31 0 0 chr17 84080337 84080369 -11192282 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 2 1226 487 273 44 22 chr17 84080391 84080526 -11192125 + RSINE1 SINE B4 28 165 0 2 1226 183 250 0 0 chr17 84080528 84080580 -11192071 + (CATA)n Simple_repeat Simple_repeat 1 52 0 3 1226 843 213 0 0 chr17 84080593 84080848 -11191803 + (CA)n Simple_repeat Simple_repeat 1 255 0 3 1226 423 225 20 13 chr17 84080850 84081003 -11191648 + (CATATA)n Simple_repeat Simple_repeat 3 156 0 3 1226 24 0 0 0 chr17 84081013 84081037 -11191614 + AT_rich Low_complexity Low_complexity 1 24 0 3 1226 1275 28 0 0 chr17 84081047 84081192 -11191459 + B1_Mus2 SINE Alu 2 146 -1 3 1226 342 0 0 0 chr17 84081194 84081232 -11191419 + (A)n Simple_repeat Simple_repeat 1 38 0 3 1226 445 162 263 8 chr17 84081701 84081819 -11190832 + B1_Mur2 SINE Alu 2 149 0 3 1226 1335 86 32 0 chr17 84081896 84082082 -11190569 + B2_Mm2 SINE B2 3 194 -1 3 1226 412 133 253 0 chr17 84082102 84082177 -11190474 + B3A SINE B2 27 120 -78 3 1226 297 75 0 0 chr17 84082201 84082241 -11190410 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 3 1226 279 54 0 0 chr17 84082363 84082400 -11190251 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 3 1226 753 219 20 0 chr17 84082407 84082553 -11190098 + B1_Mur1 SINE Alu 1 149 0 3 1226 1234 34 7 0 chr17 84082559 84082706 -11189945 + B1_Mus1 SINE Alu 1 148 0 3 1226 567 261 58 43 chr17 84082741 84082949 -11189702 + ID_B1 SINE B4 3 213 -11 3 1226 404 274 64 8 chr17 84082960 84083085 -11189566 + B1F SINE Alu 18 149 0 3 1226 218 314 43 95 chr17 84083373 84083489 -11189162 + ID_B1 SINE B4 73 182 -42 3 1226 641 211 153 16 chr17 84083507 84083658 -11188993 + B3 SINE B2 1 174 -42 3 1226 252 86 0 0 chr17 84083658 84083693 -11188958 + (CATA)n Simple_repeat Simple_repeat 2 36 0 3 1226 641 211 153 16 chr17 84083693 84083724 -11188927 + B3 SINE B2 175 208 -8 3 1226 236 315 0 0 chr17 84083742 84083796 -11188855 + ID4 SINE ID 20 73 -10 3 1226 234 344 0 0 chr17 84083744 84083805 -11188846 + ID SINE ID 23 83 -141 3 1226 3198 54 23 0 chr17 84084114 84084505 -11188146 + MTB LTR MaLR 1 400 0 3 1226 1150 61 102 12 chr17 84084550 84084716 -11187935 - B2_Mm2 SINE B2 -14 181 1 3 1226 207 0 0 0 chr17 84084736 84084759 -11187892 + (TATTG)n Simple_repeat Simple_repeat 2 24 0 3 1226 24 0 0 29 chr17 84084759 84084773 -11187878 + AT_rich Low_complexity Low_complexity 1 14 0 3 1226 1238 61 0 0 chr17 84084773 84084920 -11187731 - B1_Mus1 SINE Alu -1 147 1 3 1226 24 0 0 29 chr17 84084920 84084940 -11187711 + AT_rich Low_complexity Low_complexity 1 20 0 3 1226 309 51 0 0 chr17 84085048 84085087 -11187564 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 1226 448 290 0 20 chr17 84085124 84085226 -11187425 - ID_B1 SINE B4 -44 180 81 3 1226 463 204 107 36 chr17 84085539 84085651 -11187000 + PB1D9 SINE Alu 1 120 0 3 1226 1213 62 0 0 chr17 84085654 84085799 -11186852 + B1_Mm SINE Alu 1 145 -2 3 1226 198 0 0 0 chr17 84085799 84085821 -11186830 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3 1226 21 57 0 0 chr17 84086048 84086083 -11186568 + AT_rich Low_complexity Low_complexity 1 35 0 3 1226 1250 48 0 0 chr17 84086083 84086230 -11186421 - B1_Mus2 SINE Alu 0 147 1 3 1226 4227 164 53 90 chr17 84086230 84087149 -11185502 - RMER19B LTR ERVK -16 886 2 3 1226 211 242 15 46 chr17 84087229 84087294 -11185357 + PB1 SINE Alu 63 125 -2 3 1226 21 0 0 0 chr17 84087364 84087385 -11185266 + AT_rich Low_complexity Low_complexity 1 21 0 3 1226 1220 55 0 0 chr17 84087392 84087538 -11185113 + B1_Mus2 SINE Alu 2 147 0 3 1226 1145 88 0 0 chr17 84087565 84087712 -11184939 + B1_Mm SINE Alu 1 147 0 3 1226 736 260 19 0 chr17 84087835 84087989 -11184662 + B3A SINE B2 1 157 -41 3 1226 243 0 0 0 chr17 84087989 84088016 -11184635 + (TC)n Simple_repeat Simple_repeat 1 27 0 3 1226 207 0 0 0 chr17 84088016 84088038 -11184613 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 1226 392 248 50 116 chr17 84088143 84088305 -11184346 - B3A SINE B2 -6 192 44 3 1226 302 228 155 16 chr17 84088426 84088465 -11184186 + HAL1-2a_MD LINE L1 2342 2386 -638 3 1226 1206 48 7 0 chr17 84088465 84088610 -11184041 + B1_Mus1 SINE Alu 3 148 0 3 1226 302 228 155 16 chr17 84088610 84088699 -11183952 + HAL1-2a_MD LINE L1 2387 2488 -536 3 1226 676 207 9 0 chr17 84088706 84088822 -11183829 - B1_Mur1 SINE Alu -16 133 17 3 1226 456 326 19 102 chr17 84088718 84088923 -11183728 - ID_B1 SINE B4 -25 199 12 3 1226 266 240 25 74 chr17 84088958 84089039 -11183612 - ID4 SINE ID 0 83 7 3 1226 543 260 131 10 chr17 84089075 84089273 -11183378 + ID_B1 SINE B4 1 222 -2 3 1226 1191 36 0 0 chr17 84089413 84089550 -11183101 - B1_Mus2 SINE Alu -10 137 1 3 1226 673 267 132 119 chr17 84089687 84090057 -11182594 - MTE2b LTR MaLR 0 379 5 3 1226 323 245 9 105 chr17 84090088 84090193 -11182458 + ID_B1 SINE B4 105 199 -25 3 1226 520 236 56 24 chr17 84090206 84090332 -11182319 + RSINE1 SINE B4 5 134 -31 3 1226 273 57 0 0 chr17 84090382 84090417 -11182234 + (GGA)n Simple_repeat Simple_repeat 2 36 0 3 1226 205 205 0 0 chr17 84090459 84090498 -11182153 + T-rich Low_complexity Low_complexity 1 39 0 3 1226 465 282 8 0 chr17 84090532 84090649 -11182002 + PB1D9 SINE Alu 2 119 -1 3 1226 275 24 71 0 chr17 84091413 84091455 -11181196 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 3 1226 1223 35 14 0 chr17 84091456 84091600 -11181051 - B1_Mus1 SINE Alu -1 147 2 3 1226 550 295 40 0 chr17 84091615 84091764 -11180887 + RSINE1 SINE B4 11 165 0 3 1226 762 162 0 86 chr17 84091809 84091971 -11180680 - B1_Mur4 SINE Alu 0 150 3 3 1226 1076 228 13 194 chr17 84092298 84092678 -11179973 + MTE2a LTR MaLR 1 305 -74 3 1226 225 0 0 0 chr17 84092678 84092703 -11179948 + (CATA)n Simple_repeat Simple_repeat 2 26 0 3 1226 1076 228 13 194 chr17 84092703 84092785 -11179866 + MTE2a LTR MaLR 306 378 -1 3 1226 448 271 19 9 chr17 84092871 84092979 -11179672 - PB1D9 SINE Alu -11 109 1 3 1226 245 182 0 0 chr17 84093748 84093792 -11178859 + B1_Mur4 SINE Alu 1 44 -106 3 1226 860 172 0 27 chr17 84094536 84094547 -11178104 - B1_Mur4 SINE Alu 0 150 143 3 1226 243 0 0 0 chr17 84094547 84094574 -11178077 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1226 860 172 0 27 chr17 84094574 84094711 -11177940 - B1_Mur4 SINE Alu -8 142 6 3 1226 463 213 32 0 chr17 84094742 84094836 -11177815 - B1_Mur1 SINE Alu 0 149 53 3 1226 297 75 0 0 chr17 84094913 84094953 -11177698 + (GGA)n Simple_repeat Simple_repeat 3 42 0 3 1226 274 274 0 0 chr17 84094954 84095016 -11177635 + ID4 SINE ID 3 64 -19 3 1226 235 289 18 63 chr17 84095045 84095095 -11177556 + PB1D9 SINE Alu 15 65 -55 3 1226 432 0 0 0 chr17 84095095 84095143 -11177508 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1226 235 289 18 63 chr17 84095143 84095203 -11177448 + PB1D9 SINE Alu 66 120 0 3 1226 263 316 32 0 chr17 84095230 84095325 -11177326 + L2a LINE L2 2858 2955 -464 3 1226 5983 99 28 11 chr17 84095448 84096318 -11176333 - Lx LINE L1 -2 6652 5769 3 1226 1638 56 0 0 chr17 84096318 84096514 -11176137 + Lx LINE L1 5587 5782 -872 3 1226 331 288 54 78 chr17 84096523 84096689 -11175962 + L2a LINE L2 3209 3370 -56 3 1226 265 240 0 85 chr17 84096751 84096833 -11175818 + ID_B1 SINE B4 84 158 -66 3 1226 233 296 265 0 chr17 84096833 84096849 -11175802 + B1_Mur3 SINE Alu 3 126 -23 3 1226 532 219 54 123 chr17 84096859 84097062 -11175589 + B4A SINE B4 1 189 -103 3 1226 501 62 0 0 chr17 84097062 84097127 -11175524 + (CA)n Simple_repeat Simple_repeat 1 65 0 3 1226 639 207 6 17 chr17 84097383 84097555 -11175096 + CT-rich Low_complexity Low_complexity 3 172 0 3 1226 1376 50 0 11 chr17 84097557 84097739 -11174912 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 1226 797 151 12 110 chr17 84097749 84097913 -11174738 - B1_Mur3 SINE Alu 0 149 2 3 1226 294 284 52 7 chr17 84098061 84098196 -11174455 - B1_Mm SINE Alu -2 145 5 3 1226 247 325 74 16 chr17 84098403 84098525 -11174126 - MLT1D LTR MaLR -331 174 46 3 1226 408 20 0 0 chr17 84098737 84098786 -11173865 + (GA)n Simple_repeat Simple_repeat 1 49 0 3 1226 666 237 0 28 chr17 84099370 84099513 -11173138 - B1_Mur3 SINE Alu -10 139 1 3 1226 358 283 0 32 chr17 84099655 84099750 -11172901 + PB1D9 SINE Alu 1 92 -28 3 1226 213 228 35 0 chr17 84100332 84100389 -11172262 + CT-rich Low_complexity Low_complexity 2 60 0 3 1226 378 91 0 0 chr17 84100390 84100445 -11172206 + (TCCA)n Simple_repeat Simple_repeat 3 57 0 3 1226 811 164 0 0 chr17 84100447 84100569 -11172082 - B1_Mur3 SINE Alu -1 148 27 3 1226 1229 48 0 0 chr17 84100569 84100715 -11171936 + B1_Mm SINE Alu 2 147 0 3 1226 378 61 0 0 chr17 84100715 84100764 -11171887 + (A)n Simple_repeat Simple_repeat 1 49 0 3 1226 192 40 0 0 chr17 84100761 84100786 -11171865 + (CAAAC)n Simple_repeat Simple_repeat 2 26 0 3 1226 258 219 0 0 chr17 84100794 84100835 -11171816 - B1_Mus2 SINE Alu -106 41 1 3 1226 532 223 6 6 chr17 84100858 84101034 -11171617 + (TG)n Simple_repeat Simple_repeat 1 176 0 3 1226 634 243 40 13 chr17 84101054 84101204 -11171447 - RSINE1 SINE B4 0 165 12 3 1226 320 232 198 20 chr17 84101241 84101342 -11171309 - PB1D9 SINE Alu -1 119 1 3 1226 298 267 133 0 chr17 84101584 84101674 -11170977 - ID_B1 SINE B4 -122 102 1 3 1226 476 276 13 6 chr17 84101676 84101821 -11170830 - B3A SINE B2 0 216 72 3 1226 230 0 33 0 chr17 84101840 84101870 -11170781 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1226 1244 41 0 0 chr17 84101886 84102033 -11170618 - B1_Mus2 SINE Alu 0 147 1 3 1226 3250 31 8 0 chr17 84102033 84102420 -11170231 - MTA_Mm LTR MaLR -6 390 1 3 1226 520 293 25 77 chr17 84102843 84103039 -11169612 - ID_B1 SINE B4 -2 222 37 3 1226 400 271 0 0 chr17 84103072 84103157 -11169494 - ID_B1 SINE B4 -24 200 116 4 1226 248 208 0 38 chr17 84103175 84103280 -11169371 + (TATG)n Simple_repeat Simple_repeat 1 101 0 4 1226 489 300 97 28 chr17 84103293 84103437 -11169214 - RSINE1 SINE B4 -1 164 11 4 1226 377 237 36 0 chr17 84104079 84104172 -11168479 - PB1D7 SINE Alu -17 103 8 4 1226 337 149 185 54 chr17 84104281 84104373 -11168278 + PB1D7 SINE Alu 12 115 -5 4 1226 225 258 258 0 chr17 84104378 84104444 -11168207 + RSINE1 SINE B4 5 87 -78 4 1226 216 182 0 0 chr17 84104483 84104527 -11168124 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 4 1226 252 273 61 0 chr17 84104570 84104636 -11168015 + ID4_ SINE ID 14 83 0 4 1226 216 0 0 0 chr17 84104878 84104902 -11167749 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1226 303 113 0 0 chr17 84105505 84105558 -11167093 + (CGG)n Simple_repeat Simple_repeat 2 54 0 4 1226 536 210 80 8 chr17 84106890 84107015 -11165636 - B1_Mur4 SINE Alu -1 149 16 4 1226 305 231 0 37 chr17 84107016 84107097 -11165554 - PB1D10 SINE Alu 0 117 40 4 1226 30 27 0 0 chr17 84107124 84107161 -11165490 + AT_rich Low_complexity Low_complexity 1 37 0 4 1226 268 337 12 0 chr17 84107175 84107261 -11165390 + ID_B1 SINE B4 93 179 -45 4 1226 261 304 58 10 chr17 84107261 84107278 -11165373 + B1F1 SINE Alu 12 119 -30 4 1226 239 284 30 59 chr17 84107304 84107405 -11165246 + B1F1 SINE Alu 1 98 -51 4 1226 552 180 49 70 chr17 84107508 84107651 -11165000 + B1_Mur2 SINE Alu 10 149 0 4 1226 248 260 137 0 chr17 84108088 84108161 -11164490 - PB1D10 SINE Alu -3 114 32 4 1226 528 224 180 31 chr17 84108419 84108580 -11164071 + B4 SINE B4 35 219 -73 4 1226 749 115 53 80 chr17 84108598 84108749 -11163902 + B1_Mus1 SINE Alu 1 147 -1 4 1226 206 228 0 66 chr17 84108829 84108890 -11163761 - L2a LINE L2 0 3426 3370 4 1226 183 42 0 0 chr17 84108916 84108940 -11163711 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 4 1226 1208 68 0 0 chr17 84109131 84109278 -11163373 - B1_Mm SINE Alu 0 147 1 4 1226 270 304 0 0 chr17 84109683 84109762 -11162889 - PB1D10 SINE Alu -28 89 11 4 1226 438 248 78 35 chr17 84110088 84110258 -11162393 + ID_B1 SINE B4 48 228 -64 4 1226 331 280 132 59 chr17 84110392 84110544 -11162107 + RSINE1 SINE B4 3 165 0 4 1226 189 0 0 0 chr17 84110559 84110580 -11162071 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 4 1226 1218 56 0 0 chr17 84110580 84110724 -11161927 - B1_Mus2 SINE Alu -3 144 1 4 1226 622 179 26 9 chr17 84110725 84110838 -11161813 - B1_Mur1 SINE Alu 0 149 35 4 1226 1116 79 0 7 chr17 84110922 84111063 -11161588 - B1_Mus2 SINE Alu -3 144 5 4 1226 339 307 141 14 chr17 84111068 84111210 -11161441 - ID_B1 SINE B4 0 224 65 4 1226 497 257 56 19 chr17 84111283 84111430 -11161221 - B1F2 SINE Alu -2 147 4 4 1226 214 273 0 0 chr17 84111577 84111621 -11161030 - ID4_ SINE ID -4 79 36 4 1226 264 253 16 2 chr17 84111658 84111736 -11160915 - PB1D10 SINE Alu -1 119 41 4 1226 247 266 78 87 chr17 84112015 84112118 -11160533 - ID_B1 SINE B4 -118 106 5 4 1226 771 177 0 44 chr17 84112164 84112300 -11160351 - B3 SINE B2 -86 130 1 4 1226 707 167 48 0 chr17 84112324 84112450 -11160201 - B1_Mur3 SINE Alu -16 133 2 4 1226 319 311 142 0 chr17 84112462 84112568 -11160083 + PB1D10 SINE Alu 29 149 0 4 1226 522 0 0 0 chr17 84112940 84112998 -11159653 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 1226 240 235 53 3 chr17 84113490 84113514 -11159137 + PB1D7 SINE Alu 37 109 -11 4 1226 283 159 0 0 chr17 84113514 84113558 -11159093 + ID_B1 SINE B4 170 213 -11 4 1226 1052 102 0 0 chr17 84113622 84113769 -11158882 - B1_Mus2 SINE Alu 0 147 1 4 1226 327 278 93 7 chr17 84113775 84113888 -11158763 - B1F1 SINE Alu -2 147 2 4 1226 180 0 0 0 chr17 84114139 84114159 -11158492 + (TTTC)n Simple_repeat Simple_repeat 3 22 0 4 1226 1441 40 40 0 chr17 84114159 84114333 -11158318 - B2_Mm2 SINE B2 -14 181 1 4 1226 262 230 19 171 chr17 84114366 84114398 -11158253 - B3 SINE B2 0 216 185 4 1226 207 69 0 0 chr17 84114398 84114427 -11158224 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1226 262 230 19 171 chr17 84114427 84114447 -11158204 - B3 SINE B2 -32 184 167 4 1226 321 89 0 0 chr17 84114447 84114492 -11158159 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 1226 262 230 19 171 chr17 84114492 84114505 -11158146 - B3 SINE B2 -50 166 166 4 1226 213 94 0 0 chr17 84114505 84114537 -11158114 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1226 262 230 19 171 chr17 84114537 84114574 -11158077 - B3 SINE B2 -50 166 129 4 1226 291 229 0 0 chr17 84114633 84114681 -11157970 - RSINE1 SINE B4 -106 59 12 4 1226 222 206 83 56 chr17 84115436 84115508 -11157143 - RSINE1 SINE B4 0 165 92 4 1226 1568 193 84 32 chr17 84115509 84115856 -11156795 - ORR1D1 LTR MaLR -9 365 1 4 1226 649 269 0 0 chr17 84115887 84116028 -11156623 - ID_B1 SINE B4 0 224 84 4 1226 484 264 131 8 chr17 84116042 84116172 -11156479 - B1F SINE Alu -1 148 3 4 1226 240 316 9 101 chr17 84116088 84116197 -11156454 - MT2B LTR ERVL -360 241 143 4 1226 361 243 37 0 chr17 84116223 84116330 -11156321 - L1M2 LINE L1 -909 5234 5124 4 1226 506 209 0 0 chr17 84116354 84116445 -11156206 - B1_Mur1 SINE Alu -17 132 42 4 1226 1062 76 0 0 chr17 84116445 84116576 -11156075 - B1_Mus2 SINE Alu -16 131 1 4 1226 906 138 21 0 chr17 84116594 84116739 -11155912 - B1_Mur4 SINE Alu 0 150 3 4 1226 2185 138 66 3 chr17 84116754 84117116 -11155535 - ORR1B1 LTR MaLR -9 385 1 4 1226 797 243 43 5 chr17 84117116 84117302 -11155349 - B3 SINE B2 -14 202 10 4 1226 1185 61 0 13 chr17 84117332 84117481 -11155170 - B1_Mus2 SINE Alu 0 147 1 4 1226 378 0 0 0 chr17 84117705 84117747 -11154904 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1226 957 175 40 0 chr17 84117751 84117928 -11154723 - B3 SINE B2 -29 187 4 4 1226 297 282 186 17 chr17 84117970 84118147 -11154504 - L1M2 LINE L1 -1376 4767 4561 4 1226 589 281 23 23 chr17 84118210 84118425 -11154226 - ID_B1 SINE B4 -4 220 6 4 1226 330 254 0 14 chr17 84118505 84118577 -11154074 - ID_B1 SINE B4 -3 221 151 4 1226 939 110 7 0 chr17 84118811 84118947 -11153704 - B1_Mur4 SINE Alu -13 137 1 4 1226 336 319 50 23 chr17 84118947 84119165 -11153486 - L1_Mur3 LINE L1 -1950 3930 3707 4 1226 294 227 142 32 chr17 84119230 84119385 -11153266 - L1_Mur3 LINE L1 -2159 3721 3550 4 1226 230 306 61 88 chr17 84120064 84120125 -11152526 - B4A SINE B4 -44 248 106 4 1226 362 169 174 35 chr17 84120125 84120211 -11152440 - PB1D9 SINE Alu -2 118 21 4 1226 421 17 35 0 chr17 84120211 84120269 -11152382 + (CATAC)n Simple_repeat Simple_repeat 5 64 0 4 1226 1021 183 30 0 chr17 84120293 84120495 -11152156 + B3 SINE B2 3 210 -6 4 1226 318 265 51 0 chr17 84120831 84120948 -11151703 - HAL1 LINE L1 -841 1666 1544 4 1226 180 0 0 0 chr17 84120983 84121003 -11151648 + (TTCC)n Simple_repeat Simple_repeat 3 22 0 4 1226 677 168 63 16 chr17 84121017 84121144 -11151507 - B1_Mur2 SINE Alu -16 133 1 4 1226 559 183 34 17 chr17 84121400 84121517 -11151134 - B1F SINE Alu -2 147 29 4 1226 365 275 60 53 chr17 84121517 84121550 -11151101 - ID_B1 SINE B4 -1 223 73 4 1226 340 269 52 2 chr17 84121597 84121707 -11150944 + PB1D10 SINE Alu 2 120 0 4 1226 207 0 0 0 chr17 84122047 84122070 -11150581 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1226 444 268 122 0 chr17 84122346 84122469 -11150182 - B1F1 SINE Alu -11 138 1 4 1226 700 214 34 77 chr17 84122495 84122728 -11149923 + ID_B1 SINE B4 2 224 0 4 1226 594 112 109 27 chr17 84122772 84122882 -11149769 - ORR1C1 LTR MaLR -2 376 258 4 1226 342 0 0 0 chr17 84122901 84122939 -11149712 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1226 344 296 89 65 chr17 84123269 84123392 -11149259 + B3A SINE B2 38 163 -35 4 1226 183 42 0 0 chr17 84123393 84123417 -11149234 + (CAGA)n Simple_repeat Simple_repeat 1 24 0 4 1226 21 36 0 0 chr17 84123480 84123508 -11149143 + AT_rich Low_complexity Low_complexity 1 28 0 4 1226 673 128 16 49 chr17 84123530 84123600 -11149051 - ORR1C1 LTR MaLR -258 120 55 4 1226 3035 23 12 0 chr17 84123600 84123942 -11148709 + ORR1A0 LTR MaLR 1 346 0 4 1226 673 128 16 49 chr17 84123942 84123994 -11148657 - ORR1C1 LTR MaLR -324 54 2 4 1226 1133 50 43 0 chr17 84124026 84124167 -11148484 + B1_Mus1 SINE Alu 2 148 0 4 1226 185 119 24 0 chr17 84124175 84124217 -11148434 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1226 306 283 93 52 chr17 84124221 84124318 -11148333 - PB1D10 SINE Alu -16 101 1 4 1226 269 26 0 26 chr17 84124421 84124460 -11148191 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1226 277 178 288 0 chr17 84124611 84124684 -11147967 - B4 SINE B4 -196 96 3 4 1226 595 222 31 8 chr17 84125157 84125284 -11147367 - RSINE1 SINE B4 -35 130 1 4 1226 214 222 0 0 chr17 84125322 84125376 -11147275 - ID SINE ID -170 54 1 4 1226 320 232 10 0 chr17 84125455 84125554 -11147097 + CT-rich Low_complexity Low_complexity 1 100 0 4 1226 267 266 50 60 chr17 84125569 84125669 -11146982 - B1_Mus2 SINE Alu -23 124 26 4 1226 326 239 64 64 chr17 84125870 84125995 -11146656 - RSINE1 SINE B4 -28 137 13 4 1226 487 277 11 4 chr17 84126123 84126244 -11146407 - PB1D10 SINE Alu -19 130 11 4 1226 236 270 51 51 chr17 84126256 84126373 -11146278 - L1MD LINE L1 -761 5598 5482 5 1226 256 256 22 11 chr17 84126404 84126495 -11146156 + (TA)n Simple_repeat Simple_repeat 2 93 0 5 1226 387 0 0 0 chr17 84126500 84126543 -11146108 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1226 664 177 26 17 chr17 84126566 84126674 -11145977 + B3 SINE B2 4 112 -104 5 1226 1103 75 0 13 chr17 84126674 84126823 -11145828 + B1_Mus1 SINE Alu 2 148 0 5 1226 457 220 19 29 chr17 84126835 84126938 -11145713 + B3 SINE B2 98 199 -17 5 1226 784 144 106 0 chr17 84127261 84127393 -11145258 - B1_Mus1 SINE Alu 0 148 3 5 1226 233 89 22 0 chr17 84127566 84127611 -11145040 + (TTAA)n Simple_repeat Simple_repeat 3 48 0 5 1226 1142 88 0 0 chr17 84127620 84127767 -11144884 - B1_Mus2 SINE Alu 0 147 1 5 1226 1018 198 45 0 chr17 84127768 84127970 -11144681 - B3 SINE B2 -5 211 1 5 1226 231 233 83 0 chr17 84128115 84128175 -11144476 - L1MEc LINE L1 -6319 81 17 5 1226 318 275 10 62 chr17 84128271 84128368 -11144283 - B1_Mur4 SINE Alu 0 150 59 5 1226 347 260 28 57 chr17 84128430 84128536 -11144115 - B1_Mur2 SINE Alu -45 104 2 5 1226 25 0 0 0 chr17 84129027 84129052 -11143599 + AT_rich Low_complexity Low_complexity 1 25 0 5 1226 2016 296 117 46 chr17 84129056 84129168 -11143483 - Lx8 LINE L1 -4 7469 7328 5 1226 225 83 0 0 chr17 84129168 84129204 -11143447 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1226 2016 296 117 46 chr17 84129204 84129367 -11143284 - Lx8 LINE L1 -146 7327 7157 5 1226 658 228 21 0 chr17 84129367 84129512 -11143139 + B1F2 SINE Alu 2 149 0 5 1226 2016 296 117 46 chr17 84129512 84130406 -11142245 - Lx8 LINE L1 -317 7156 6216 5 1226 270 0 0 0 chr17 84130446 84130476 -11142175 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 1226 22 35 0 0 chr17 84130618 84130647 -11142004 + AT_rich Low_complexity Low_complexity 1 29 0 5 1226 444 227 82 10 chr17 84130724 84130822 -11141829 - B1F2 SINE Alu -29 120 16 5 1226 1678 156 147 5 chr17 84131034 84131401 -11141250 + MTD LTR MaLR 1 419 0 5 1226 842 141 30 0 chr17 84131862 84131997 -11140654 + B1_Mus1 SINE Alu 10 148 0 5 1226 236 30 0 29 chr17 84132018 84132052 -11140599 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 5 1226 222 293 248 0 chr17 84132070 84132203 -11140448 + B3 SINE B2 5 170 -46 5 1226 427 272 104 0 chr17 84132264 84132389 -11140262 + B3A SINE B2 35 172 -26 5 1226 1888 174 71 14 chr17 84132431 84132798 -11139853 + Lx5 LINE L1 6663 7050 0 5 1226 378 312 72 0 chr17 84132819 84132957 -11139694 + Charlie1 DNA MER1_type 2634 2781 0 5 1226 574 261 31 58 chr17 84133010 84133234 -11139417 + ID_B1 SINE B4 1 218 -6 5 1226 260 278 14 27 chr17 84133234 84133308 -11139343 + GA-rich Low_complexity Low_complexity 1 73 0 5 1226 201 121 0 0 chr17 84133362 84133395 -11139256 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 1226 887 236 6 19 chr17 84133401 84133595 -11139056 - B3 SINE B2 0 198 2 5 1226 195 42 0 0 chr17 84133611 84133635 -11139016 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1226 693 176 8 0 chr17 84133635 84133754 -11138897 + B1_Mur1 SINE Alu 1 120 -29 5 1226 270 0 0 0 chr17 84134155 84134185 -11138466 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1226 398 263 183 9 chr17 84134202 84134317 -11138334 - RSINE1 SINE B4 -29 136 2 5 1226 599 157 101 36 chr17 84134488 84134627 -11138024 + B1_Mus1 SINE Alu 1 148 0 5 1226 995 101 50 0 chr17 84134703 84134842 -11137809 + B1_Mus1 SINE Alu 2 147 -1 5 1226 873 209 127 18 chr17 84135040 84135365 -11137286 + MTC LTR MaLR 1 375 -4 5 1226 328 198 149 11 chr17 84135780 84135867 -11136784 - PB1D10 SINE Alu 0 117 19 5 1226 180 0 0 0 chr17 84136043 84136063 -11136588 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1226 905 53 113 15 chr17 84136063 84136196 -11136455 - B1_Mm SINE Alu 0 147 2 5 1226 480 99 0 0 chr17 84136444 84136515 -11136136 + (TCTG)n Simple_repeat Simple_repeat 2 72 0 5 1226 916 181 0 0 chr17 84136546 84136695 -11135956 - B1_Mur2 SINE Alu 0 149 1 5 1226 323 245 39 39 chr17 84136704 84136806 -11135845 - PB1D10 SINE Alu 0 117 16 5 1226 28 29 0 0 chr17 84136852 84136887 -11135764 + AT_rich Low_complexity Low_complexity 1 35 0 5 1226 991 124 14 7 chr17 84136887 84137033 -11135618 + B1_Mus1 SINE Alu 2 148 0 5 1226 233 316 90 20 chr17 84137087 84137187 -11135464 - B4A SINE B4 0 292 186 5 1226 230 248 34 76 chr17 84137214 84137332 -11135319 - B3A SINE B2 -85 113 1 5 1226 236 316 71 31 chr17 84137343 84137441 -11135210 - PB1D9 SINE Alu -11 109 8 5 1226 2241 155 28 23 chr17 84138233 84138629 -11134022 + MTC LTR MaLR 24 421 0 5 1226 225 327 116 38 chr17 84138883 84139150 -11133501 + YREP_Mm Unknown Unknown 7 294 -1518 5 1226 726 267 7 13 chr17 84139013 84139170 -11133481 - ID_B1 SINE B4 -55 237 84 5 1226 354 270 147 0 chr17 84140517 84140680 -11131971 - MIR SINE MIR -8 254 68 5 1226 28 0 0 0 chr17 84141455 84141483 -11131168 + AT_rich Low_complexity Low_complexity 1 28 0 5 1226 223 298 42 125 chr17 84141613 84141635 -11131016 - B2_Mm2 SINE B2 -6 189 14 5 1226 359 292 29 153 chr17 84141635 84141805 -11130846 - RSINE1 SINE B4 -2 163 15 5 1226 1763 194 78 52 chr17 84142753 84143161 -11129490 + MTD LTR MaLR 1 419 0 5 1226 412 138 136 12 chr17 84143709 84143790 -11128861 - ORR1C1 LTR MaLR -287 91 1 5 1226 5264 215 83 19 chr17 84143790 84145077 -11127574 - ORR1C1-int LTR MaLR 0 1370 1 5 1226 197 33 33 0 chr17 84145084 84145114 -11127537 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1226 1307 27 0 0 chr17 84145114 84145262 -11127389 - B1_Mus1 SINE Alu 0 148 1 5 1226 1779 129 36 125 chr17 84145270 84145685 -11126966 - ORR1C1 LTR MaLR 0 378 1 5 1226 264 208 0 0 chr17 84145814 84145867 -11126784 - ORR1C1-int LTR MaLR -1107 263 211 5 1226 747 98 67 3 chr17 84147381 84147501 -11125150 - B1_Mur4 SINE Alu -10 140 15 5 1226 283 306 28 0 chr17 84147492 84147564 -11125087 - PB1D10 SINE Alu -43 74 1 5 153 2817 141 32 81 chr17 84147726 84148257 -11124394 - RLTR19C LTR ERVK 0 506 2 5 1227 354 129 0 0 chr17 84148559 84148621 -11124030 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 1227 30 0 0 0 chr17 84148849 84148879 -11123772 + AT_rich Low_complexity Low_complexity 1 30 0 5 1227 1460 40 23 0 chr17 84148879 84149055 -11123596 - B2_Mm2 SINE B2 -14 181 2 5 1227 242 198 213 32 chr17 84149058 84149152 -11123499 - Lx8 LINE L1 -10 7463 7353 5 1227 2350 165 59 14 chr17 84149337 84149799 -11122852 - RLTR11A LTR ERVK -1 527 4 5 1227 703 226 109 33 chr17 84149799 84149907 -11122744 - Lx7 LINE L1 -432 7264 7160 5 1227 1513 110 359 0 chr17 84149907 84150197 -11122454 - ORR1B1 LTR MaLR 0 394 1 5 1227 703 226 109 33 chr17 84150197 84150299 -11122352 - Lx7 LINE L1 -537 7159 7038 5 1227 181 322 83 17 chr17 84150449 84150509 -11122142 - L2 LINE L2 -3346 73 10 5 1227 622 299 33 0 chr17 84150759 84150973 -11121678 - ID_B1 SINE B4 0 224 4 5 1227 285 75 0 0 chr17 84151389 84151429 -11121222 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1227 284 320 110 16 chr17 84151486 84151613 -11121038 - ID_B1 SINE B4 -1 223 85 5 1227 267 191 0 0 chr17 84151637 84151700 -11120951 + A-rich Low_complexity Low_complexity 1 63 0 5 1227 22 35 0 0 chr17 84151735 84151764 -11120887 + AT_rich Low_complexity Low_complexity 1 29 0 5 1227 218 233 16 16 chr17 84151807 84151868 -11120783 - B1_Mus2 SINE Alu -83 64 4 5 1227 2441 79 9 0 chr17 84151884 84152227 -11120424 - BGLII LTR ERVK -75 346 1 5 1227 213 189 0 36 chr17 84152275 84152330 -11120321 + T-rich Low_complexity Low_complexity 1 53 0 5 1227 481 194 102 0 chr17 84152511 84152609 -11120042 + PB1D9 SINE Alu 1 108 -12 5 1227 319 319 28 48 chr17 84153711 84153773 -11118878 - RSINE1 SINE B4 -22 143 83 5 1227 1203 105 77 0 chr17 84153773 84153954 -11118697 - B2_Mm2 SINE B2 0 195 1 5 1227 319 319 28 48 chr17 84153954 84154036 -11118615 - RSINE1 SINE B4 -83 82 2 5 1227 918 222 64 0 chr17 84154221 84154424 -11118227 + B3 SINE B2 1 216 0 5 1227 411 221 83 43 chr17 84154467 84154515 -11118136 - B1_Mur3 SINE Alu -27 122 72 5 1227 180 125 0 0 chr17 84154515 84154547 -11118104 + (TATG)n Simple_repeat Simple_repeat 1 32 0 5 1227 411 218 79 22 chr17 84154547 84154613 -11118038 - B1_Mur3 SINE Alu -78 71 5 5 1227 306 250 15 15 chr17 84154557 84154622 -11118029 - ID_B1 SINE B4 -82 142 78 5 1227 404 146 169 12 chr17 84154621 84154704 -11117947 - PB1 SINE Alu -2 125 30 5 1227 271 184 11 11 chr17 84155224 84155312 -11117339 + (TG)n Simple_repeat Simple_repeat 1 88 0 5 1227 535 265 115 28 chr17 84155325 84155577 -11117074 - B4A SINE B4 0 292 19 5 1227 540 183 122 38 chr17 84155648 84155779 -11116872 + B1_Mur1 SINE Alu 2 143 -6 5 1227 268 273 0 0 chr17 84155933 84155988 -11116663 - ID SINE ID -167 57 3 5 1227 642 286 31 18 chr17 84156256 84156453 -11116198 - B3A SINE B2 -7 209 9 5 1227 459 96 14 0 chr17 84156639 84156712 -11115939 + B1_Mur3 SINE Alu 76 149 0 5 1227 567 114 132 9 chr17 84156742 84156848 -11115803 + PB1D9 SINE Alu 2 120 0 5 1227 1275 66 0 0 chr17 84156882 84157170 -11115481 + (TG)n Simple_repeat Simple_repeat 1 288 0 5 1227 303 266 43 52 chr17 84157326 84157441 -11115210 + PB1D10 SINE Alu 4 117 0 5 1227 547 158 50 0 chr17 84158158 84158259 -11114392 + PB1D9 SINE Alu 15 120 0 5 1227 281 296 174 27 chr17 84158716 84158935 -11113716 + Tigger9a DNA Tigger 413 663 -69 5 1227 329 217 0 42 chr17 84158951 84159023 -11113628 - ID4 SINE ID -13 70 2 5 1227 648 164 17 8 chr17 84159188 84159305 -11113346 - PB1D9 SINE Alu -1 119 2 5 1227 421 281 41 111 chr17 84159540 84159712 -11112939 + MER20 DNA MER1_type 1 160 -59 5 1227 1870 116 138 15 chr17 84159730 84160070 -11112581 - ORR1B1 LTR MaLR -8 386 5 5 1227 234 346 12 12 chr17 84160288 84160370 -11112281 - ID4_ SINE ID -1 82 1 6 1227 1248 106 21 0 chr17 84161173 84161361 -11111290 + B2_Mm1t SINE B2 1 192 -1 6 1227 295 385 0 0 chr17 84161401 84161510 -11111141 - PB1D9 SINE Alu -11 109 1 6 1227 248 343 0 34 chr17 84161710 84161888 -11110763 + (CAA)n Simple_repeat Simple_repeat 2 173 0 6 1227 911 242 14 23 chr17 84162410 84162620 -11110031 - B3 SINE B2 -1 215 8 6 1227 322 191 67 67 chr17 84162940 84163030 -11109621 + B1F SINE Alu 57 146 -3 6 1227 314 275 143 0 chr17 84163085 84163176 -11109475 + PB1D7 SINE Alu 2 105 -15 6 1227 614 144 77 0 chr17 84163212 84163316 -11109335 - PB1D9 SINE Alu 0 120 9 6 1227 360 0 0 0 chr17 84163343 84163383 -11109268 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 6 1227 1490 74 5 0 chr17 84163718 84163908 -11108743 + B2_Mm1t SINE B2 1 191 -2 6 1227 183 100 0 0 chr17 84164164 84164194 -11108457 + (GTTTG)n Simple_repeat Simple_repeat 2 31 0 6 1227 851 155 0 21 chr17 84164404 84164549 -11108102 - B1_Mur1 SINE Alu -2 147 6 6 1227 476 281 23 127 chr17 84164549 84164622 -11108029 - B4 SINE B4 -67 223 29 6 1227 249 384 60 12 chr17 84164893 84165059 -11107592 + B4A SINE B4 119 292 0 6 1227 431 187 0 9 chr17 84165080 84165188 -11107463 + (CA)n Simple_repeat Simple_repeat 2 108 0 6 1227 1282 111 21 10 chr17 84165207 84165399 -11107252 + B2_Mm2 SINE B2 2 195 0 6 1227 1468 228 147 0 chr17 84165415 84165775 -11106876 + MTD LTR MaLR 7 419 0 6 1227 512 240 129 7 chr17 84166460 84166615 -11106036 - ID_B1 SINE B4 -9 215 42 6 1227 599 248 92 7 chr17 84166623 84166765 -11105886 - RSINE1 SINE B4 -1 164 11 6 1227 338 330 0 10 chr17 84166772 84166873 -11105778 - PB1D7 SINE Alu -3 117 18 6 1227 798 219 0 14 chr17 84166876 84166889 -11105762 - B1_Mus1 SINE Alu 0 148 136 6 1227 207 0 0 0 chr17 84166889 84166912 -11105739 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 6 1227 787 219 0 14 chr17 84166912 84167046 -11105605 - B1_Mus1 SINE Alu -13 135 3 6 1227 378 0 0 0 chr17 84167361 84167403 -11105248 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1227 385 226 93 9 chr17 84167409 84167516 -11105135 - RSINE1 SINE B4 -39 126 11 6 1227 31 0 0 0 chr17 84168140 84168171 -11104480 + AT_rich Low_complexity Low_complexity 1 31 0 6 1227 453 36 0 0 chr17 84168171 84168226 -11104425 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 1227 401 336 8 8 chr17 84168260 84168380 -11104271 - PB1 SINE Alu -7 120 1 6 1227 333 0 0 0 chr17 84168386 84168423 -11104228 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 6 1227 826 58 2 0 chr17 84168429 84168539 -11104112 - B1_Mm SINE Alu -21 126 17 6 1227 23 0 0 0 chr17 84168543 84168566 -11104085 + AT_rich Low_complexity Low_complexity 1 23 0 6 1227 244 278 19 0 chr17 84168575 84168629 -11104022 - ID_B1 SINE B4 -76 148 94 6 1227 553 196 109 36 chr17 84168769 84168907 -11103744 - B1_Mur1 SINE Alu -1 148 1 6 1227 245 293 21 128 chr17 84168988 84169103 -11103548 - MamGypLTR2 LTR Gypsy -551 638 538 6 1227 432 0 0 0 chr17 84169103 84169151 -11103500 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 1227 245 293 21 128 chr17 84169151 84169176 -11103475 - MamGypLTR2 LTR Gypsy -652 537 513 6 1227 488 80 298 66 chr17 84169393 84169514 -11103137 - B2_Mm2 SINE B2 0 195 47 6 1227 1231 89 47 0 chr17 84169561 84169730 -11102921 - B2_Mm1t SINE B2 -15 178 2 6 1227 318 250 16 0 chr17 84169996 84170060 -11102591 + ID_B1 SINE B4 91 155 -69 6 1227 542 64 26 0 chr17 84170979 84171057 -11101594 + (TTTA)n Simple_repeat Simple_repeat 1 80 0 6 1227 417 304 58 0 chr17 84171107 84171245 -11101406 - ID_B1 SINE B4 -76 148 3 6 1227 189 0 0 0 chr17 84171969 84171990 -11100661 + (TTA)n Simple_repeat Simple_repeat 1 21 0 6 1227 281 244 133 0 chr17 84172586 84172676 -11099975 - PB1D10 SINE Alu 0 117 16 6 1227 372 271 97 48 chr17 84173207 84173331 -11099320 - PB1D10 SINE Alu -19 130 1 6 1227 232 238 23 91 chr17 84173265 84173353 -11099298 + YREP_Mm Unknown Unknown 251 332 -1480 6 1227 508 144 71 20 chr17 84173383 84173482 -11099169 - PB1D9 SINE Alu -12 108 5 6 1227 426 214 8 120 chr17 84173525 84173642 -11099009 + B1_Mur3 SINE Alu 45 148 -1 6 1227 549 118 209 0 chr17 84174074 84174184 -11098467 - B1_Mm SINE Alu -6 141 9 6 1227 684 259 31 6 chr17 84174376 84174535 -11098116 - RSINE1 SINE B4 0 165 3 6 1227 284 229 127 14 chr17 84175208 84175279 -11097372 - ID4 SINE ID -4 79 1 6 1227 405 39 0 0 chr17 84175811 84175862 -11096789 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 1227 290 279 22 44 chr17 84175917 84176007 -11096644 - PB1 SINE Alu -7 120 33 6 1227 391 318 0 0 chr17 84176109 84176216 -11096435 - PB1D7 SINE Alu -1 119 13 6 1227 271 274 42 109 chr17 84176369 84176407 -11096244 + MT2B LTR ERVL 131 241 -360 6 1227 349 188 27 29 chr17 84176407 84176488 -11096163 + PB1D10 SINE Alu 1 86 -63 6 1227 1125 62 0 7 chr17 84176520 84176665 -11095986 + B1_Mm SINE Alu 2 145 -2 6 1227 523 229 8 24 chr17 84176934 84177059 -11095592 + ID_B1 SINE B4 79 201 -23 6 1227 433 265 28 35 chr17 84176937 84177078 -11095573 + B1F SINE Alu 1 140 -9 6 1227 341 282 61 78 chr17 84177073 84177304 -11095347 - RLTR15 LTR ERVK -8 351 125 6 1227 500 263 92 35 chr17 84177301 84177474 -11095177 - RLTR15 LTR ERVK -176 183 1 6 1227 381 93 0 0 chr17 84177604 84177658 -11094993 + (TTTC)n Simple_repeat Simple_repeat 2 55 0 6 1227 1227 41 0 0 chr17 84177658 84177804 -11094847 - B1_Mus2 SINE Alu 0 147 2 6 1227 2456 200 51 35 chr17 84178523 84179068 -11093583 - RLTR20B1 LTR ERVK -9 554 1 6 1227 1336 77 49 0 chr17 84179087 84179270 -11093381 - B2_Mm1t SINE B2 0 193 2 6 1227 972 204 102 5 chr17 84179276 84179473 -11093178 - B3 SINE B2 0 216 1 6 1227 470 200 90 0 chr17 84179478 84179578 -11093073 - PB1D10 SINE Alu -5 112 4 6 1227 1206 89 43 32 chr17 84179904 84180089 -11092562 - B2_Mm2 SINE B2 -8 187 1 6 1227 1594 37 21 0 chr17 84180113 84180301 -11092350 - B2_Mm1a SINE B2 0 193 2 6 1227 3035 60 13 5 chr17 84180689 84181077 -11091574 + MTB LTR MaLR 2 392 -8 6 1227 456 259 9 0 chr17 84181862 84181974 -11090677 - PB1D10 SINE Alu -2 115 3 6 1227 578 307 209 9 chr17 84182007 84182475 -11090176 + Kanga2_a DNA Tc2 33 594 -294 6 1227 350 241 35 61 chr17 84182778 84182893 -11089758 + PB1D7 SINE Alu 1 112 -8 6 1227 294 228 0 0 chr17 84183143 84183200 -11089451 + tRNA-Ala-GCA tRNA tRNA 1 57 -18 6 1227 239 309 0 80 chr17 84183200 84183226 -11089425 + ID2 SINE ID 7 82 -1 6 1227 1066 110 0 14 chr17 84183261 84183409 -11089242 + B1_Mur3 SINE Alu 2 147 -2 6 1227 1117 95 0 7 chr17 84184510 84184658 -11087993 - B1_Mus2 SINE Alu 0 147 1 6 1227 664 193 0 0 chr17 84186242 84186351 -11086300 - B3 SINE B2 -106 110 2 6 1227 578 168 136 8 chr17 84186542 84186557 -11086094 - B1_Mur4 SINE Alu -1 149 135 6 1227 612 77 0 0 chr17 84186557 84186648 -11086003 + (TC)n Simple_repeat Simple_repeat 1 91 0 6 1227 578 168 136 8 chr17 84186648 84186764 -11085887 - B1_Mur4 SINE Alu -16 134 1 6 1227 240 35 0 0 chr17 84186810 84186839 -11085812 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 6 1227 1419 94 11 0 chr17 84187176 84187367 -11085284 - B2_Mm1t SINE B2 0 193 1 6 1227 182 116 23 0 chr17 84187917 84187960 -11084691 + (TTTTTG)n Simple_repeat Simple_repeat 4 47 0 6 1227 398 222 18 36 chr17 84189017 84189129 -11083522 - PB1D10 SINE Alu -7 110 1 6 1227 2546 145 82 0 chr17 84189272 84189734 -11082917 - RLTR28 LTR ERVL -3 521 22 6 1227 571 245 86 7 chr17 84189761 84189901 -11082750 + B3A SINE B2 38 188 -10 6 1227 255 203 0 0 chr17 84193030 84193104 -11079547 + T-rich Low_complexity Low_complexity 1 74 0 6 1227 1060 60 6 51 chr17 84193124 84193281 -11079370 - B1_Mur4 SINE Alu 0 150 1 6 1227 1210 48 157 0 chr17 84193500 84193666 -11078985 + B2_Mm1t SINE B2 1 192 -1 6 1227 348 200 0 0 chr17 84194621 84194711 -11077940 + (CGTG)n Simple_repeat Simple_repeat 2 91 0 6 1227 1257 47 0 0 chr17 84195103 84195251 -11077400 + B1_Mus1 SINE Alu 1 148 0 6 1227 23 0 0 0 chr17 84195414 84195437 -11077214 + AT_rich Low_complexity Low_complexity 1 23 0 6 1227 476 188 4 61 chr17 84195449 84195558 -11077093 + B1F SINE Alu 20 120 0 6 1227 732 212 126 16 chr17 84196010 84196192 -11076459 - B3 SINE B2 0 216 15 6 1227 625 189 19 0 chr17 84196720 84196826 -11075825 - PB1D9 SINE Alu -12 108 1 6 1227 294 171 0 19 chr17 84197148 84197216 -11075435 - RSINE1 SINE B4 -224 68 3 6 1227 303 301 10 51 chr17 84199708 84199806 -11072845 + B4A SINE B4 82 175 -117 6 1227 503 245 9 26 chr17 84199721 84199834 -11072817 + PB1D7 SINE Alu 10 120 0 6 1227 22 0 0 0 chr17 84199864 84199886 -11072765 + AT_rich Low_complexity Low_complexity 1 22 0 6 1227 580 287 54 24 chr17 84200121 84200289 -11072362 + ID_B1 SINE B4 50 222 -2 6 1227 311 0 0 25 chr17 84200315 84200355 -11072296 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 1227 343 184 0 34 chr17 84200405 84200479 -11072172 + ID4_ SINE ID 11 79 -73 6 1227 331 239 56 0 chr17 84200933 84201004 -11071647 + ID_B1 SINE B4 137 211 -13 6 1227 222 37 0 0 chr17 84201009 84201036 -11071615 + (TTAAA)n Simple_repeat Simple_repeat 3 29 0 7 1227 289 250 211 0 chr17 84201046 84201122 -11071529 + PB1D10 SINE Alu 26 117 0 7 1227 375 256 61 127 chr17 84201438 84201693 -11070958 - RLTR13C2 LTR ERVK -38 985 642 7 1227 252 180 0 0 chr17 84201847 84201897 -11070754 - B2_Mm2 SINE B2 -148 50 1 7 1227 600 230 16 8 chr17 84204022 84204149 -11068502 + ID_B1 SINE B4 91 218 -6 7 1227 339 113 0 0 chr17 84205269 84205322 -11067329 + (TCC)n Simple_repeat Simple_repeat 3 55 0 7 1227 622 283 29 29 chr17 84205331 84205502 -11067149 - ID_B1 SINE B4 -34 190 20 7 1227 288 173 0 19 chr17 84205495 84205545 -11067106 - ORR1E LTR MaLR -7 372 324 7 1227 239 339 48 101 chr17 84205545 84205660 -11066991 + B3A SINE B2 2 121 -77 7 1227 486 0 0 0 chr17 84205660 84205714 -11066937 + (TG)n Simple_repeat Simple_repeat 2 55 0 7 1227 467 244 148 0 chr17 84205714 84205733 -11066918 + B4A SINE B4 130 155 -137 7 1227 239 339 48 101 chr17 84205733 84205805 -11066846 + B3A SINE B2 122 196 -2 7 1227 792 233 171 18 chr17 84205814 84206089 -11066562 - ORR1E LTR MaLR -42 317 1 7 1227 251 306 61 10 chr17 84206802 84206901 -11065750 + PB1D10 SINE Alu 5 108 -9 7 1227 217 258 156 104 chr17 84206907 84207080 -11065571 + B2_Mm1a SINE B2 1 182 -11 7 1227 260 83 0 0 chr17 84207184 84207220 -11065431 + U2 snRNA snRNA 1 36 -152 7 1227 655 89 29 0 chr17 84207382 84207490 -11065161 + B1_Mur3 SINE Alu 3 125 -25 7 1227 239 262 379 100 chr17 84208306 84208475 -11064176 - ID_B1 SINE B4 0 224 9 7 1227 207 0 0 0 chr17 84208488 84208511 -11064140 + (CA)n Simple_repeat Simple_repeat 1 23 0 7 1227 318 325 0 12 chr17 84209255 84209336 -11063315 - MIRb SINE MIR -132 136 57 7 1227 186 167 0 0 chr17 84209695 84209725 -11062926 + L2b LINE L2 3330 3359 -16 7 1227 520 331 73 104 chr17 84209750 84209846 -11062805 + B4 SINE B4 13 105 -187 7 1227 806 153 58 0 chr17 84209846 84209983 -11062668 + B1_Mus2 SINE Alu 3 147 0 7 1227 520 331 73 104 chr17 84209983 84210002 -11062649 + B4 SINE B4 106 116 -176 7 1227 1044 200 50 0 chr17 84210002 84210202 -11062449 + B3 SINE B2 5 214 -2 7 1227 520 331 73 104 chr17 84210202 84210306 -11062345 + B4 SINE B4 117 211 -81 7 1227 258 39 19 56 chr17 84210306 84210360 -11062291 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 7 1227 520 331 73 104 chr17 84210360 84210425 -11062226 + B4 SINE B4 212 287 -5 7 1227 319 217 323 11 chr17 84210446 84210539 -11062112 + ID_B1 SINE B4 92 213 -11 7 1227 292 327 29 0 chr17 84210539 84210550 -11062101 + PB1D10 SINE Alu 11 117 0 7 1227 734 124 8 0 chr17 84210550 84210671 -11061980 + (GAGAA)n Simple_repeat Simple_repeat 5 126 0 7 1227 26 0 0 0 chr17 84210761 84210787 -11061864 + AT_rich Low_complexity Low_complexity 1 26 0 7 1227 222 216 0 121 chr17 84210873 84210989 -11061662 + C-rich Low_complexity Low_complexity 4 105 0 7 1227 296 211 0 0 chr17 84211135 84211192 -11061459 - Lx8 LINE L1 -360 7113 7057 7 1227 213 262 0 0 chr17 84211306 84211348 -11061303 + Alu SINE Alu 19 60 -115 7 1227 534 294 139 0 chr17 84212527 84212707 -11059944 + ID_B1 SINE B4 5 209 -15 7 1227 1133 90 14 0 chr17 84212972 84213117 -11059534 - B1_Mus2 SINE Alu 0 147 1 7 1227 701 223 34 66 chr17 84213117 84213315 -11059336 - B3 SINE B2 -2 214 9 7 1227 587 243 30 65 chr17 84213427 84213715 -11058936 - MTE2a LTR MaLR 0 379 41 7 1227 248 316 132 0 chr17 84213805 84213941 -11058710 - L1MEb LINE L1 -3677 2469 2316 7 1227 864 161 21 0 chr17 84213974 84214117 -11058534 + RSINE1 SINE B4 3 148 -17 7 1227 423 0 0 0 chr17 84214123 84214170 -11058481 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 1227 45 34 0 0 chr17 84214171 84214230 -11058421 + AT_rich Low_complexity Low_complexity 1 59 0 7 1227 227 265 155 42 chr17 84214262 84214333 -11058318 - ID4 SINE ID -2 81 3 7 1227 231 189 0 0 chr17 84214359 84214396 -11058255 - ID4_ SINE ID -21 62 26 7 1227 420 198 62 10 chr17 84214419 84214516 -11058135 - PB1D10 SINE Alu -1 116 15 7 1227 560 183 77 0 chr17 84214663 84214767 -11057884 - PB1D9 SINE Alu -7 113 2 7 1227 246 268 32 118 chr17 84214690 84214783 -11057868 - MT2B LTR ERVL -365 236 152 7 1227 1231 62 0 0 chr17 84214800 84214946 -11057705 - B1_Mus1 SINE Alu 0 148 3 7 1227 520 195 47 31 chr17 84214965 84215092 -11057559 - B1_Mur1 SINE Alu 0 149 21 7 1227 539 237 37 37 chr17 84215124 84215260 -11057391 + B1F2 SINE Alu 14 149 0 7 1227 596 251 177 25 chr17 84215717 84215954 -11056697 - B4A SINE B4 -18 274 2 7 1227 949 166 36 6 chr17 84215992 84216185 -11056466 + URR1A DNA MER1_type 1 226 0 7 1227 265 280 91 27 chr17 84216624 84216734 -11055917 - L1MEb LINE L1 -5953 183 67 7 1227 278 258 0 31 chr17 84216943 84217007 -11055644 + ID SINE ID 23 84 -140 7 1227 290 308 96 51 chr17 84217045 84217223 -11055428 - HAL1 LINE L1 -1784 723 538 7 1227 217 349 0 0 chr17 84217441 84217527 -11055124 + (TG)n Simple_repeat Simple_repeat 2 87 0 7 1227 438 200 0 11 chr17 84217561 84217652 -11054999 - RSINE1 SINE B4 -73 92 3 7 1227 326 269 75 42 chr17 84218541 84218661 -11053990 + MIRc SINE MIR 5 128 -140 7 1227 2691 102 56 0 chr17 84221155 84221528 -11051123 - ORR1B1 LTR MaLR 0 394 1 7 1227 404 281 62 39 chr17 84222399 84222577 -11050074 - LTR33A_ LTR ERVL -270 261 80 7 1227 522 0 0 0 chr17 84223107 84223165 -11049486 + (TC)n Simple_repeat Simple_repeat 1 58 0 7 1227 279 54 0 0 chr17 84223734 84223771 -11048880 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 7 1227 1085 66 0 0 chr17 84223771 84223908 -11048743 - B1_Mus1 SINE Alu -10 138 2 7 1227 23 0 0 0 chr17 84223914 84223937 -11048714 + AT_rich Low_complexity Low_complexity 1 23 0 7 1227 544 50 25 0 chr17 84223943 84224023 -11048628 + (TATG)n Simple_repeat Simple_repeat 4 85 0 7 1227 380 288 71 18 chr17 84224030 84224143 -11048508 - RSINE1 SINE B4 -18 147 29 7 1227 1092 66 131 6 chr17 84224237 84224260 -11048391 - B2_Mm2 SINE B2 -5 190 168 7 1227 348 64 0 0 chr17 84224260 84224307 -11048344 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 1227 1092 66 131 6 chr17 84224307 84224451 -11048200 - B2_Mm2 SINE B2 -28 167 3 7 1227 735 254 104 36 chr17 84224471 84224692 -11047959 - Lx8 LINE L1 -235 7238 7003 7 1227 525 201 89 48 chr17 84224705 84224851 -11047800 - Lx8 LINE L1 -527 6946 6795 7 1227 1581 225 163 29 chr17 84224851 84225446 -11047205 - RMER19A LTR ERVK 0 737 1 7 1227 445 240 30 60 chr17 84225446 84225579 -11047072 - Lx8 LINE L1 -673 6800 6672 7 1227 529 208 148 0 chr17 84225691 84225843 -11046808 + MIR SINE MIR 88 268 0 7 1227 1198 54 71 0 chr17 84225847 84226015 -11046636 - MTB LTR MaLR 0 400 221 7 1227 291 225 33 83 chr17 84226032 84226061 -11046590 + ORR1A3-int LTR MaLR 591 613 -1350 7 1227 1491 56 0 0 chr17 84226061 84226259 -11046392 + MT2C_Mm LTR ERVL 1 198 -277 7 1227 944 53 38 0 chr17 84226238 84226369 -11046282 - MT2C_Mm LTR ERVL -339 136 1 7 1227 225 0 0 0 chr17 84226418 84226443 -11046208 + (T)n Simple_repeat Simple_repeat 1 25 0 7 1227 864 200 0 0 chr17 84226888 84227068 -11045583 + CT-rich Low_complexity Low_complexity 1 180 0 7 1227 239 236 0 0 chr17 84231289 84231344 -11041307 + PB1D10 SINE Alu 63 117 0 7 1227 387 0 0 0 chr17 84231344 84231387 -11041264 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 1227 226 217 159 0 chr17 84231426 84231495 -11041156 + ID4 SINE ID 1 80 -3 7 1227 351 0 0 0 chr17 84231895 84231934 -11040717 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 1227 342 237 7 14 chr17 84232275 84232416 -11040235 + CT-rich Low_complexity Low_complexity 1 140 0 7 1227 204 135 0 0 chr17 84232414 84232451 -11040200 + (CAT)n Simple_repeat Simple_repeat 3 39 0 7 1227 260 336 46 62 chr17 84232451 84232580 -11040071 - RSINE1 SINE B4 -10 155 29 7 1227 1826 108 74 3 chr17 84232580 84232876 -11039775 + ORR1A2 LTR MaLR 3 319 -8 7 1227 716 188 156 0 chr17 84233285 84233471 -11039180 + B3 SINE B2 2 216 0 7 1227 525 16 0 0 chr17 84233920 84233982 -11038669 + (TG)n Simple_repeat Simple_repeat 1 62 0 7 1227 510 67 0 0 chr17 84233982 84234057 -11038594 + (GA)n Simple_repeat Simple_repeat 2 76 0 7 1227 233 113 0 114 chr17 84235335 84235405 -11037246 + C-rich Low_complexity Low_complexity 1 62 0 7 1227 444 321 104 12 chr17 84235784 84236024 -11036627 + L4 LINE RTE 1448 1709 -320 7 1227 383 261 73 40 chr17 84236241 84236365 -11036286 - RSINE1 SINE B4 -36 129 2 7 1227 21 0 0 0 chr17 84236368 84236389 -11036262 + AT_rich Low_complexity Low_complexity 1 21 0 7 1227 908 152 44 50 chr17 84236859 84237039 -11035612 - URR1B DNA MER1_type 0 225 47 7 1227 211 350 0 0 chr17 84237191 84237251 -11035400 + ID4_ SINE ID 22 81 -2 7 1227 323 254 0 0 chr17 84238913 84238984 -11033667 + PB1D7 SINE Alu 50 120 0 7 1227 761 103 0 8 chr17 84238984 84239066 -11033585 + (GAA)n Simple_repeat Simple_repeat 3 84 0 7 1227 1241 79 11 0 chr17 84239066 84239244 -11033407 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 7 1227 761 103 0 8 chr17 84239244 84239279 -11033372 + (GAA)n Simple_repeat Simple_repeat 1 35 0 7 1227 204 125 0 0 chr17 84239498 84239530 -11033121 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 1227 306 67 0 0 chr17 84239592 84239637 -11033014 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 1227 1063 55 13 33 chr17 84239809 84239959 -11032692 + B1_Mm SINE Alu 1 147 0 7 1227 243 0 0 0 chr17 84239966 84239993 -11032658 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1227 1324 125 177 4 chr17 84240879 84241128 -11031523 - MTC LTR MaLR -129 292 1 7 1227 432 0 0 0 chr17 84241314 84241362 -11031289 + (TC)n Simple_repeat Simple_repeat 2 49 0 7 1227 230 219 16 0 chr17 84241718 84241782 -11030869 + CT-rich Low_complexity Low_complexity 1 65 0 7 1227 301 258 53 11 chr17 84241787 84241881 -11030770 - PB1D10 SINE Alu -13 104 7 8 1227 319 208 41 14 chr17 84241816 84241889 -11030762 - ID_B1 SINE B4 -70 154 80 8 1227 849 114 0 0 chr17 84241903 84242035 -11030616 + (TG)n Simple_repeat Simple_repeat 2 133 0 8 1227 254 149 43 0 chr17 84243460 84243507 -11029144 - B2_Mm2 SINE B2 -145 50 2 8 1227 186 43 0 0 chr17 84243519 84243542 -11029109 + (TTG)n Simple_repeat Simple_repeat 2 24 0 8 1227 1113 82 0 0 chr17 84243555 84243701 -11028950 - B1_Mm SINE Alu 0 147 2 8 1227 1113 179 129 8 chr17 84243753 84244001 -11028650 + MTC LTR MaLR 63 340 -81 8 1227 244 111 0 0 chr17 84243992 84244028 -11028623 - RSINE1 SINE B4 -36 129 94 8 1227 213 343 14 14 chr17 84244012 84244083 -11028568 - B4 SINE B4 -219 73 3 8 1227 234 105 0 0 chr17 84244084 84244122 -11028529 + (T)n Simple_repeat Simple_repeat 1 38 0 8 1227 435 264 33 13 chr17 84244383 84244533 -11028118 + MLT1C LTR MaLR 172 324 -143 8 1227 328 255 9 64 chr17 84245006 84245115 -11027536 + MIR SINE MIR 4 106 -156 8 1227 254 267 88 11 chr17 84245419 84245510 -11027141 + ID_B1 SINE B4 2 99 -125 8 1227 213 241 56 0 chr17 84246744 84246798 -11025853 - ID4_ SINE ID -15 68 12 8 1227 434 215 153 24 chr17 84246846 84246970 -11025681 - B1F1 SINE Alu 0 149 10 8 1227 2012 91 27 24 chr17 84247051 84247379 -11025272 - ORR1A4 LTR MaLR 0 329 1 8 1227 1024 276 83 30 chr17 84248428 84248730 -11023921 - MTE2b LTR MaLR -59 320 3 8 1227 479 271 35 54 chr17 84249185 84249388 -11023263 - MER21B LTR ERV1 -49 814 616 8 1227 1853 235 61 5 chr17 84249455 84249899 -11022752 - Lx6 LINE L1 0 7460 6992 8 1227 831 238 40 28 chr17 84250243 84250490 -11022161 + RLTR14 LTR ERV1 1 250 -132 8 1227 1938 125 3 10 chr17 84250585 84250899 -11021752 + Lx4A LINE L1 6736 7047 -11 8 1227 266 306 36 57 chr17 84251066 84251260 -11021391 - MER57C2 LTR ERV1 -4 430 241 8 1227 909 35 0 0 chr17 84251609 84251722 -11020929 + (GAA)n Simple_repeat Simple_repeat 3 115 0 8 1227 1012 247 75 96 chr17 84251723 84251780 -11020871 - MT2B LTR ERVL 0 601 554 8 1227 509 42 0 27 chr17 84251780 84251853 -11020798 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 8 1227 1012 247 75 96 chr17 84251853 84251875 -11020776 - MT2B LTR ERVL -48 553 521 8 1227 225 0 0 0 chr17 84251875 84251900 -11020751 + (GA)n Simple_repeat Simple_repeat 1 25 0 8 1227 1012 262 58 95 chr17 84251900 84252319 -11020332 - MT2B LTR ERVL -81 520 1 8 1227 518 221 21 29 chr17 84252321 84252461 -11020190 + RSINE1 SINE B4 3 141 -24 8 1227 415 228 98 87 chr17 84252512 84252647 -11020004 + B4A SINE B4 95 224 -68 8 1227 216 0 0 0 chr17 84252647 84252671 -11019980 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 8 1227 291 288 0 0 chr17 84252672 84252745 -11019906 + ID4 SINE ID 3 75 -8 8 1227 415 228 98 87 chr17 84252745 84252790 -11019861 + B4A SINE B4 225 279 -13 8 1227 714 146 316 0 chr17 84252879 84253037 -11019614 - B3 SINE B2 -6 210 3 8 1227 950 213 19 15 chr17 84253257 84253462 -11019189 + B3 SINE B2 5 210 -6 8 1227 1735 173 39 8 chr17 84253556 84253912 -11018739 - ORR1B2 LTR MaLR 0 367 1 8 1227 262 193 0 17 chr17 84253956 84254014 -11018637 + MTEb LTR MaLR 323 379 0 8 1227 2885 110 73 10 chr17 84254175 84254670 -11017981 - RLTR11A LTR ERVK 0 528 3 8 1227 498 46 0 0 chr17 84254964 84255029 -11017622 + (TCTA)n Simple_repeat Simple_repeat 3 67 0 8 1227 1186 26 38 0 chr17 84255046 84255391 -11017260 + (TCTA)n Simple_repeat Simple_repeat 1 358 0 8 1227 755 209 124 0 chr17 84255391 84255568 -11017083 - B3 SINE B2 -13 203 5 8 1227 498 33 0 0 chr17 84255789 84255849 -11016802 + (TC)n Simple_repeat Simple_repeat 1 60 0 8 1227 254 87 22 0 chr17 84255849 84255894 -11016757 + (CA)n Simple_repeat Simple_repeat 1 47 0 8 1227 233 273 103 13 chr17 84256387 84256465 -11016186 - LTR41B LTR ERVL -193 565 481 8 1227 385 174 21 85 chr17 84257128 84257139 -11015512 + MT2B LTR ERVL 153 157 -444 8 1227 698 55 0 0 chr17 84257139 84257230 -11015421 + B1_Mm SINE Alu 1 91 -56 8 1227 276 306 23 42 chr17 84257219 84257386 -11015265 + Kanga1b DNA Tc2 591 758 -21 8 1227 997 187 24 29 chr17 84257509 84257718 -11014933 + B3 SINE B2 1 208 -8 8 1227 713 264 5 71 chr17 84258140 84258352 -11014299 - B3A SINE B2 0 198 1 8 1227 601 238 0 53 chr17 84258394 84258545 -11014106 + ID_B1 SINE B4 80 222 -2 8 1227 995 279 46 43 chr17 84258685 84259101 -11013550 + Charlie21a DNA MER1_type 313 729 -484 8 1227 578 254 79 98 chr17 84259113 84259479 -11013172 + Charlie21a DNA MER1_type 699 1057 -156 8 1227 401 279 10 0 chr17 84259505 84259609 -11013042 + PB1D10 SINE Alu 11 115 -2 8 1227 24 32 0 0 chr17 84260123 84260154 -11012497 + AT_rich Low_complexity Low_complexity 1 31 0 8 1227 315 237 206 0 chr17 84260187 84260284 -11012367 - B3 SINE B2 -99 117 1 8 1227 225 94 0 0 chr17 84260300 84260332 -11012319 + (TTTTC)n Simple_repeat Simple_repeat 4 35 0 8 1227 1159 41 0 7 chr17 84260333 84260481 -11012170 - B1_Mus2 SINE Alu 0 147 1 8 1227 598 47 0 34 chr17 84260516 84260597 -11012054 + B1_Mm SINE Alu 60 138 -9 8 1227 207 0 0 0 chr17 84260597 84260620 -11012031 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 8 1227 598 77 1786 65 chr17 84260620 84260634 -11012017 + B1_Mm SINE Alu 139 145 -2 8 1227 228 185 0 0 chr17 84260650 84260704 -11011947 + A-rich Low_complexity Low_complexity 1 54 0 8 1227 524 0 0 202 chr17 84261283 84261377 -11011274 + tRNA-Ile-ATA tRNA tRNA 1 75 -2 8 1227 346 273 81 52 chr17 84262228 84262402 -11010249 + B3A SINE B2 2 180 -18 8 1227 217 309 0 129 chr17 84262507 84262600 -11010051 - B4 SINE B4 -209 83 3 8 1227 680 228 16 26 chr17 84263300 84263489 -11009162 - B2_Mm2 SINE B2 -7 188 2 8 1227 2578 46 55 0 chr17 84263687 84264014 -11008637 - ORR1A1 LTR MaLR 0 346 2 8 1227 3864 152 127 18 chr17 84264057 84264832 -11007819 - RMER13A LTR ERVK -1 859 1 8 1227 567 171 0 0 chr17 84265291 84265396 -11007255 + GA-rich Low_complexity Low_complexity 1 105 0 8 1227 474 253 44 51 chr17 84265490 84265632 -11007019 + RSINE1 SINE B4 9 150 -15 8 1227 714 12 0 0 chr17 84265632 84265715 -11006936 + (TC)n Simple_repeat Simple_repeat 1 83 0 8 1227 474 253 44 51 chr17 84265715 84265730 -11006921 + RSINE1 SINE B4 151 165 0 8 1227 315 0 0 0 chr17 84265745 84265780 -11006871 + (CATA)n Simple_repeat Simple_repeat 2 36 0 8 1227 976 150 64 123 chr17 84265799 84266035 -11006616 + ORR1B1 LTR MaLR 41 262 -132 8 1227 233 257 112 49 chr17 84265910 84266053 -11006598 + MLT2B4 LTR ERVL 207 358 -198 8 1227 695 221 0 32 chr17 84267063 84267217 -11005434 + B1F SINE Alu 1 149 0 8 1227 207 204 0 0 chr17 84267217 84267261 -11005390 + A-rich Low_complexity Low_complexity 1 44 0 8 1227 1795 249 57 42 chr17 84267593 84268133 -11004518 + RMER1B Other Other 20 502 -564 8 1227 4497 187 113 19 chr17 84268131 84269288 -11003363 + RMER1A Other Other 1 1024 -6 8 1227 829 237 27 59 chr17 84269341 84269561 -11003090 - B3 SINE B2 -2 214 2 8 1227 279 259 149 23 chr17 84269706 84269793 -11002858 + ID_B1 SINE B4 60 157 -67 8 1227 595 291 13 0 chr17 84269793 84269944 -11002707 + RSINE1 SINE B4 2 154 -11 8 1227 530 184 115 39 chr17 84269987 84270117 -11002534 + B1_Mur3 SINE Alu 1 140 -9 8 1227 243 254 127 0 chr17 84270156 84270227 -11002424 + ID_B1 SINE B4 145 224 0 8 1227 1952 137 18 127 chr17 84270387 84270442 -11002209 - ORR1B1 LTR MaLR 0 394 352 8 1227 1078 98 63 42 chr17 84270442 84270633 -11002018 - B2_Mm2 SINE B2 0 195 1 8 1227 1952 137 18 127 chr17 84270633 84271019 -11001632 - ORR1B1 LTR MaLR -43 351 1 8 1227 1107 251 110 20 chr17 84271172 84271526 -11001125 - MTD LTR MaLR -5 414 29 8 1227 186 227 0 0 chr17 84271595 84271639 -11001012 + CT-rich Low_complexity Low_complexity 2 45 0 8 1227 1101 34 0 64 chr17 84271780 84271937 -11000714 + B1_Mus2 SINE Alu 1 147 0 8 1227 249 159 0 0 chr17 84271937 84272000 -11000651 + A-rich Low_complexity Low_complexity 1 63 0 8 1227 536 170 0 9 chr17 84273575 84273682 -10998969 + CT-rich Low_complexity Low_complexity 4 109 0 8 1227 216 158 0 0 chr17 84273681 84273719 -10998932 + T-rich Low_complexity Low_complexity 1 38 0 8 1227 2460 121 47 15 chr17 84274542 84274944 -10997707 + MTC LTR MaLR 7 421 0 8 1227 234 379 67 27 chr17 84275002 84275227 -10997424 - MIRb SINE MIR 0 268 35 8 1227 218 271 0 17 chr17 84276267 84276327 -10996324 + CT-rich Low_complexity Low_complexity 1 59 0 8 1227 221 269 43 29 chr17 84276327 84276396 -10996255 - MIR SINE MIR -116 146 77 8 1227 392 342 19 45 chr17 84277311 84277467 -10995184 + RSINE1 SINE B4 8 159 -6 8 1227 879 137 0 0 chr17 84277503 84277642 -10995009 + B1_Mur2 SINE Alu 9 147 -2 8 1227 183 42 0 0 chr17 84277762 84277786 -10994865 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 8 1227 228 35 0 0 chr17 84278005 84278034 -10994617 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 8 1227 1129 72 7 13 chr17 84278035 84278189 -10994462 - B2_Mm1a SINE B2 -39 154 2 8 1227 1904 111 20 23 chr17 84278279 84278583 -10994068 - ORR1A3 LTR MaLR -22 304 2 8 1227 621 256 103 152 chr17 84278584 84278738 -10993913 + B3A SINE B2 21 178 -20 8 1227 288 0 0 0 chr17 84278738 84278770 -10993881 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 1227 246 256 103 152 chr17 84278770 84278799 -10993852 + B2_Mm2 SINE B2 170 195 0 8 1227 277 296 126 42 chr17 84279037 84279237 -10993414 - MLT1H1 LTR MaLR -283 272 64 8 1228 397 346 58 119 chr17 84279533 84279960 -10992691 + MLT1G1-int LTR MaLR 332 729 -680 8 1228 460 296 84 63 chr17 84279960 84280151 -10992500 + B3A SINE B2 1 195 -3 8 1228 777 249 117 8 chr17 84280295 84280526 -10992125 - MTD LTR MaLR -6 413 156 8 1228 3982 144 16 9 chr17 84280526 84281155 -10991496 + RLTR17 LTR ERVK 1 633 -59 8 1228 609 309 0 36 chr17 84281211 84281283 -10991368 - MTD LTR MaLR -257 162 93 8 1228 1722 138 88 63 chr17 84281283 84281601 -10991050 - ORR1A3 LTR MaLR 0 326 1 9 1228 609 309 0 36 chr17 84281601 84281696 -10990955 - MTD LTR MaLR -327 92 1 8 1228 423 302 106 56 chr17 84281799 84282074 -10990577 + MLT1G1-int LTR MaLR 1101 1481 -8 8 1228 351 328 47 16 chr17 84282167 84282294 -10990357 + MLT1G1 LTR MaLR 114 244 -335 8 1228 729 221 0 8 chr17 84282300 84282428 -10990223 + B1_Mur4 SINE Alu 3 129 -21 9 1228 1239 191 13 26 chr17 84282494 84282617 -10990034 - URR1B DNA MER1_type 0 225 105 9 1228 2278 123 100 8 chr17 84282617 84282978 -10989673 + ORR1B1 LTR MaLR 1 394 0 9 1228 1239 191 13 26 chr17 84282978 84283080 -10989571 - URR1B DNA MER1_type -121 104 3 9 1228 968 289 32 21 chr17 84283443 84283726 -10988925 - B4A SINE B4 0 292 7 9 1228 674 258 0 24 chr17 84283763 84283930 -10988721 + RSINE1 SINE B4 3 165 0 9 1228 741 323 187 64 chr17 84283945 84283980 -10988671 - Zaphod DNA Tip100 -3139 892 853 9 1228 1142 264 68 21 chr17 84283980 84284320 -10988331 - ORR1E LTR MaLR 0 359 4 9 1228 741 323 187 64 chr17 84284320 84285061 -10987590 - Zaphod DNA Tip100 -3179 852 21 9 1228 764 169 121 63 chr17 84285174 84285364 -10987287 + RMER30 DNA MER1_type 2 202 0 9 1228 228 365 19 19 chr17 84285400 84285506 -10987145 - MLT1L LTR MaLR -4 606 501 9 1228 524 233 200 77 chr17 84286559 84286819 -10985832 - B4 SINE B4 0 292 1 9 1228 450 0 0 0 chr17 84287917 84287967 -10984684 + (TG)n Simple_repeat Simple_repeat 2 51 0 9 1228 564 15 0 0 chr17 84287969 84288034 -10984617 + (GA)n Simple_repeat Simple_repeat 1 65 0 9 1228 332 235 107 16 chr17 84291316 84291437 -10981214 - MER102b DNA MER1_type -201 140 9 9 1228 1338 82 33 5 chr17 84291516 84291700 -10980951 - B2_Mm2 SINE B2 -5 190 2 9 1228 392 246 99 60 chr17 84291879 84291915 -10980736 + CYRA11_Mm Unknown Y-chromosome 128 170 -447 9 1228 940 145 201 16 chr17 84291915 84292104 -10980547 - URR1A DNA MER1_type 0 226 3 9 1228 187 236 77 106 chr17 84292453 84292557 -10980094 + MIRc SINE MIR 4 104 -164 9 1228 234 250 62 50 chr17 84292695 84292775 -10979876 + L2b LINE L2 3293 3373 -2 9 1228 299 235 21 86 chr17 84293472 84293565 -10979086 - PB1D9 SINE Alu -5 115 29 9 1228 681 193 0 0 chr17 84293635 84293780 -10978871 + (CA)n Simple_repeat Simple_repeat 2 146 0 9 1228 304 180 0 0 chr17 84293804 84293854 -10978797 + HAL1-3A_ME LINE L1 1977 2026 -832 9 1228 485 356 7 20 chr17 84294038 84294187 -10978464 - ID_B1 SINE B4 -5 219 73 9 1228 985 144 75 6 chr17 84294314 84294488 -10978163 - B2_Mm2 SINE B2 -9 186 1 9 1228 1057 273 67 26 chr17 84295303 84295649 -10977002 - MLT1B LTR MaLR -30 360 1 9 1228 641 36 12 0 chr17 84295761 84295845 -10976806 + (TC)n Simple_repeat Simple_repeat 2 86 0 9 1228 599 311 39 58 chr17 84295850 84296058 -10976593 - B4A SINE B4 0 292 89 9 1228 192 111 0 0 chr17 84297305 84297341 -10975310 + (TG)n Simple_repeat Simple_repeat 2 37 0 9 1228 297 0 0 0 chr17 84297701 84297734 -10974917 + (TG)n Simple_repeat Simple_repeat 1 33 0 9 1228 212 154 128 0 chr17 84298278 84298317 -10974334 + L2b LINE L2 3328 3371 -4 9 1228 293 312 32 0 chr17 84298473 84298566 -10974085 + (CATA)n Simple_repeat Simple_repeat 4 99 0 9 1228 668 323 21 25 chr17 84299464 84299702 -10972949 - MER96B DNA hAT -166 251 15 9 1228 342 169 0 0 chr17 84299841 84299906 -10972745 + (TG)n Simple_repeat Simple_repeat 1 65 0 9 1228 263 289 92 10 chr17 84300524 84300622 -10972029 - ID_B1 SINE B4 -118 106 1 9 1228 340 266 211 0 chr17 84300669 84300778 -10971873 - ID_B1 SINE B4 -10 214 83 9 1228 1020 211 300 47 chr17 84300853 84301320 -10971331 + RMER4B LTR ERVK 1 585 0 9 1228 513 193 0 0 chr17 84302340 84302485 -10970166 + GA-rich Low_complexity Low_complexity 2 146 0 9 1228 210 71 0 0 chr17 84303054 84303082 -10969569 + (AGGTG)n Simple_repeat Simple_repeat 1 28 0 9 1228 337 206 44 0 chr17 84303082 84303150 -10969501 + B1F SINE Alu 46 116 -33 9 1228 272 205 90 67 chr17 84303108 84303197 -10969454 + RMER15 LTR ERVL 299 389 -186 9 1228 257 257 13 13 chr17 84303975 84304050 -10968601 + CT-rich Low_complexity Low_complexity 5 79 0 9 1228 326 273 60 52 chr17 84304051 84304167 -10968484 - PB1D10 SINE Alu 0 117 1 9 1228 258 274 48 8 chr17 84304259 84304384 -10968267 + MER33 DNA MER1_type 195 324 0 9 1228 466 291 18 0 chr17 84304515 84304625 -10968026 - PB1D10 SINE Alu -5 112 1 9 1228 235 245 19 0 chr17 84305521 84305574 -10967077 - MLT1I LTR MaLR -3 408 355 9 1228 279 79 0 0 chr17 84306278 84306316 -10966335 + (TCTG)n Simple_repeat Simple_repeat 3 40 0 9 1228 385 258 55 22 chr17 84306340 84306431 -10966220 - B1F2 SINE Alu -20 129 36 9 1228 373 328 134 23 chr17 84306812 84307074 -10965577 + MLT1A0 LTR MaLR 6 296 -69 9 1228 2435 130 119 54 chr17 84307138 84307634 -10965017 - RMER6A LTR ERVK -228 528 1 9 1228 306 0 0 0 chr17 84307661 84307695 -10964956 + (TG)n Simple_repeat Simple_repeat 2 35 0 9 1228 731 237 51 6 chr17 84307706 84307863 -10964788 - B3A SINE B2 -33 165 2 9 1228 372 295 40 109 chr17 84307880 84308055 -10964596 - RSINE1 SINE B4 0 165 3 9 1228 273 98 0 0 chr17 84309486 84309527 -10963124 + (C)n Simple_repeat Simple_repeat 1 41 0 9 1228 433 259 88 9 chr17 84309879 84309992 -10962659 - B4A SINE B4 -152 140 19 9 1228 234 369 48 10 chr17 84310300 84310404 -10962247 - L2b LINE L2 -1 3374 3267 9 1228 324 303 113 0 chr17 84310966 84311108 -10961543 + L1MEg LINE L1 1393 1550 -4534 9 1228 372 150 90 0 chr17 84311113 84311213 -10961438 + Lx9 LINE L1 7535 7643 -1 9 1228 360 143 0 0 chr17 84311214 84311284 -10961367 + (CA)n Simple_repeat Simple_repeat 2 71 0 9 1228 283 271 0 41 chr17 84311290 84311363 -10961288 + ID4 SINE ID 9 78 -5 9 1228 426 108 0 0 chr17 84311371 84311436 -10961215 + (CA)n Simple_repeat Simple_repeat 1 65 0 9 1228 305 24 24 0 chr17 84311441 84311483 -10961168 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 9 1228 590 274 179 13 chr17 84311684 84311913 -10960738 - MTEa LTR MaLR -37 342 76 9 1228 204 371 39 67 chr17 84312042 84312250 -10960401 - L2b LINE L2 -1481 1938 1737 9 1228 882 51 42 0 chr17 84312268 84312386 -10960265 - B1_Mus1 SINE Alu 0 148 26 9 1228 302 269 51 0 chr17 84312861 84312939 -10959712 - MER45A DNA Tip100 -3 175 94 9 1228 376 268 47 77 chr17 84313640 84313810 -10958841 + MER33 DNA MER1_type 56 220 -104 9 1228 882 73 16 24 chr17 84313869 84313995 -10958656 - B1_Mur4 SINE Alu 0 150 26 9 1228 276 240 0 128 chr17 84313919 84314005 -10958646 - RLTR25A LTR ERVK -531 572 498 9 1228 1794 103 177 19 chr17 84314059 84314376 -10958275 + ORR1B1 LTR MaLR 28 394 0 9 1228 227 213 21 21 chr17 84314709 84314757 -10957894 + MIRc SINE MIR 113 160 -108 9 1228 697 149 0 0 chr17 84316718 84316825 -10955826 - B1_Mur3 SINE Alu -1 148 42 9 1228 296 182 0 52 chr17 84316853 84316911 -10955740 - B1_Mur4 SINE Alu -94 56 2 9 1228 244 186 48 48 chr17 84316857 84316919 -10955732 - B4A SINE B4 -150 142 81 9 1228 353 22 22 0 chr17 84317634 84317680 -10954971 + (GA)n Simple_repeat Simple_repeat 2 48 0 9 1228 215 208 20 20 chr17 84317684 84317733 -10954918 - MIR SINE MIR -87 121 73 9 1228 482 333 8 16 chr17 84318490 84318615 -10954036 + RSINE1 SINE B4 37 160 -5 9 1228 222 298 25 8 chr17 84318623 84318745 -10953906 + (TATATG)n Simple_repeat Simple_repeat 3 126 0 9 1228 754 281 11 33 chr17 84318767 84318951 -10953700 - B3A SINE B2 -18 180 1 9 1228 483 292 113 88 chr17 84318952 84319305 -10953346 - MLT1A1 LTR MaLR -2 406 45 9 1228 708 288 11 11 chr17 84319582 84319768 -10952883 + B3A SINE B2 2 187 -11 9 1228 360 0 0 0 chr17 84319792 84319832 -10952819 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 1228 775 314 184 62 chr17 84320061 84320546 -10952105 + Arthur1 DNA Tip100 26 569 -3378 9 1228 332 305 98 8 chr17 84320638 84320770 -10951881 + MLT2B2 LTR ERVL 67 210 -310 9 1228 420 345 0 0 chr17 84320770 84320889 -10951762 + MLT2B2 LTR ERVL 371 489 -73 9 1228 283 280 13 13 chr17 84320922 84320998 -10951653 + MTEb LTR MaLR 161 236 -143 9 1228 478 296 107 18 chr17 84321050 84321274 -10951377 + ERVL-int LTR ERVL 890 1133 -4624 9 1228 302 67 22 0 chr17 84321301 84321346 -10951305 + (TTGG)n Simple_repeat Simple_repeat 1 46 0 9 1228 825 239 114 28 chr17 84321346 84321377 -10951274 + ERVL-int LTR ERVL 1195 1225 -4532 9 1228 2355 163 37 7 chr17 84321377 84321786 -10950865 + MTC LTR MaLR 1 421 0 9 1228 825 239 114 28 chr17 84321786 84322008 -10950643 + ERVL-int LTR ERVL 1226 1470 -4287 9 1228 303 207 21 118 chr17 84322082 84322175 -10950476 - MLT2B2 LTR ERVL -431 84 1 9 1228 804 148 0 39 chr17 84322228 84322464 -10950187 + CT-rich Low_complexity Low_complexity 1 226 0 9 1228 783 217 28 0 chr17 84322464 84322607 -10950044 - B1_Mus1 SINE Alu 0 148 2 9 1228 374 195 7 0 chr17 84322608 84322691 -10949960 - ERVL-int LTR ERVL -27 5730 5663 9 1228 394 319 102 42 chr17 84322776 84323012 -10949639 + MLT2B1 LTR ERVL 44 293 -227 9 1228 436 332 101 39 chr17 84323104 84323461 -10949190 + Arthur1 DNA Tip100 3526 3904 -43 9 1228 819 278 74 63 chr17 84323478 84323747 -10948904 + MTE2a LTR MaLR 1 272 -107 9 1228 370 286 20 39 chr17 84324322 84324424 -10948227 + L2b LINE L2 3242 3341 -34 9 1228 204 122 0 0 chr17 84324442 84324483 -10948168 + (CCA)n Simple_repeat Simple_repeat 1 41 0 9 1228 381 93 0 0 chr17 84324683 84324737 -10947914 + (TG)n Simple_repeat Simple_repeat 1 54 0 9 1228 473 163 11 0 chr17 84324849 84324941 -10947710 + CT-rich Low_complexity Low_complexity 4 96 0 9 1228 491 235 8 48 chr17 84324957 84325082 -10947569 - B1_Mur2 SINE Alu 0 149 30 9 1228 714 105 0 0 chr17 84325225 84325330 -10947321 + (TTTC)n Simple_repeat Simple_repeat 1 105 0 9 1228 273 315 56 84 chr17 84325744 84325886 -10946765 - MT2B LTR ERVL -303 298 161 9 1228 416 298 17 25 chr17 84325759 84325892 -10946759 - ID_B1 SINE B4 -76 216 73 9 1228 878 179 0 7 chr17 84325917 84326063 -10946588 + B1_Mur4 SINE Alu 5 149 -1 1 1228 186 118 0 0 chr17 84326065 84326099 -10946552 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 1 1228 185 310 0 66 chr17 84326386 84326462 -10946189 - MIRc SINE MIR -129 139 69 1 1228 641 289 50 20 chr17 84326476 84326674 -10945977 - ID_B1 SINE B4 -3 221 18 1 1228 696 56 0 0 chr17 84328717 84328806 -10943845 + (TTCC)n Simple_repeat Simple_repeat 3 91 0 1 1228 306 0 0 0 chr17 84328810 84328844 -10943807 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1228 571 316 13 0 chr17 84328846 84328998 -10943653 - RSINE1 SINE B4 -10 155 2 1 1228 475 270 0 9 chr17 84329018 84329130 -10943521 - PB1D10 SINE Alu -6 111 1 1 1228 297 257 65 19 chr17 84329265 84329372 -10943279 - PB1D10 SINE Alu 0 117 6 1 1228 325 357 44 9 chr17 84329388 84329501 -10943150 - L1MEe LINE L1 -2933 3711 3595 1 1228 465 305 93 71 chr17 84329560 84329647 -10943004 - L1MEe LINE L1 -3739 2925 2843 1 1228 871 244 221 43 chr17 84329647 84329798 -10942853 + MTE2a LTR MaLR 1 205 -174 1 1228 1310 126 16 0 chr17 84329798 84329989 -10942662 - B2_Mm2 SINE B2 -1 194 1 1 1228 871 244 221 43 chr17 84329989 84330159 -10942492 + MTE2a LTR MaLR 206 379 0 1 1228 465 305 93 71 chr17 84330159 84330339 -10942312 - L1MEe LINE L1 -3822 2842 2652 1 1228 280 192 96 0 chr17 84330349 84330422 -10942229 - L1MEe LINE L1 -4702 1944 1865 1 1228 276 290 140 37 chr17 84330487 84330623 -10942028 - L1MEe LINE L1 -5510 1032 883 1 1228 1069 52 36 29 chr17 84330659 84330798 -10941853 + B1_Mm SINE Alu 2 141 -6 1 1228 411 21 0 0 chr17 84330803 84330851 -10941800 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 1 1228 362 309 65 19 chr17 84331327 84331482 -10941169 - B3A SINE B2 -36 162 1 1 1228 1695 21 0 0 chr17 84331507 84331695 -10940956 + B2_Mm1a SINE B2 2 189 -4 1 1228 867 259 41 37 chr17 84332443 84332712 -10939939 - B4A SINE B4 -18 274 5 1 1228 678 102 102 0 chr17 84332873 84332981 -10939670 - B1_Mur4 SINE Alu -9 141 23 1 1228 286 160 72 96 chr17 84332921 84333004 -10939647 - MT2B LTR ERVL -361 240 160 1 1228 276 119 0 0 chr17 84333823 84333865 -10938786 - ID_B1 SINE B4 -62 162 121 1 1228 445 244 17 11 chr17 84334440 84334618 -10938033 + GA-rich Low_complexity Low_complexity 2 180 0 1 1228 652 228 0 75 chr17 84335593 84335728 -10936923 + B1F SINE Alu 1 132 -17 1 1228 207 0 0 0 chr17 84335728 84335751 -10936900 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 1 1228 652 228 0 75 chr17 84335751 84335776 -10936875 + B1F SINE Alu 133 148 -1 1 1228 465 243 63 0 chr17 84336260 84336371 -10936280 + RSINE1 SINE B4 26 143 -22 1 1228 405 261 50 14 chr17 84336836 84336976 -10935675 - B1F1 SINE Alu 0 149 5 1 1228 624 14 0 0 chr17 84337464 84337537 -10935114 + (TCTA)n Simple_repeat Simple_repeat 3 75 0 1 1228 365 192 103 0 chr17 84337539 84337617 -10935034 - PB1D10 SINE Alu -19 98 13 1 1228 182 297 108 0 chr17 84337712 84337786 -10934865 + L2b LINE L2 3089 3170 -205 1 1228 289 325 8 26 chr17 84339747 84339864 -10932787 - MLT1J LTR MaLR -167 345 231 1 1228 584 310 115 28 chr17 84340716 84341288 -10931363 - L1ME3 LINE L1 -122 6051 5415 1 1228 593 246 7 27 chr17 84341847 84341993 -10930658 + B1F2 SINE Alu 6 148 -1 1 1228 353 282 111 0 chr17 84342019 84342136 -10930515 + ID_B1 SINE B4 87 216 -8 1 1228 393 268 0 0 chr17 84342150 84342232 -10930419 + ID4_ SINE ID 1 82 -1 1 1228 454 208 13 20 chr17 84342232 84342384 -10930267 + GA-rich Low_complexity Low_complexity 1 151 0 1 1228 258 291 0 71 chr17 84342429 84342514 -10930137 + ID4_ SINE ID 5 83 0 1 1228 333 140 0 0 chr17 84342514 84342571 -10930080 + (GGAA)n Simple_repeat Simple_repeat 1 57 0 1 1228 391 336 0 49 chr17 84342755 84342877 -10929774 - PB1D10 SINE Alu 0 117 2 1 1228 2214 131 12 106 chr17 84343117 84343534 -10929117 - ORR1C1 LTR MaLR 0 378 1 1 1228 912 255 48 127 chr17 84343776 84344090 -10928561 - B4A SINE B4 -2 290 2 1 1228 392 367 32 5 chr17 84344221 84344437 -10928214 - MER58A DNA MER1_type -2 222 1 1 1228 302 414 63 47 chr17 84344437 84344868 -10927783 + MER110-int LTR ERV1 2008 2435 -2212 1 1228 1143 66 0 0 chr17 84344868 84345005 -10927646 + B1_Mus1 SINE Alu 2 138 -10 1 1228 357 0 57 0 chr17 84345005 84345058 -10927593 + (CAA)n Simple_repeat Simple_repeat 2 57 0 1 1228 302 414 63 47 chr17 84345058 84345152 -10927499 + MER110-int LTR ERV1 2436 2541 -2106 1 1228 618 82 0 0 chr17 84345300 84345385 -10927266 + (TG)n Simple_repeat Simple_repeat 2 86 0 1 1228 639 176 0 0 chr17 84345387 84345495 -10927156 - B1_Mur4 SINE Alu -15 135 28 1 1228 1486 59 0 11 chr17 84345687 84345870 -10926781 + B2_Mm2 SINE B2 2 183 -12 1 1228 737 76 9 0 chr17 84345870 84345975 -10926676 + (GGAA)n Simple_repeat Simple_repeat 3 108 0 1 1228 479 189 0 11 chr17 84346927 84347018 -10925633 + 5S rRNA rRNA 1 90 -31 1 1228 246 156 0 0 chr17 84347151 84347196 -10925455 + (CATG)n Simple_repeat Simple_repeat 1 45 0 1 1228 225 0 0 0 chr17 84347833 84347858 -10924793 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 1228 240 352 114 8 chr17 84348397 84348520 -10924131 - L2b LINE L2 -2 3373 3238 1 1228 245 370 19 38 chr17 84348697 84348857 -10923794 + L1M5 LINE L1 5539 5695 -429 1 1228 1157 82 0 13 chr17 84348930 84349079 -10923572 + B1_Mus2 SINE Alu 1 147 0 1 1228 624 208 202 0 chr17 84349366 84349544 -10923107 - MER121 Unknown Unknown -139 273 60 1 1228 1261 41 0 0 chr17 84350954 84351101 -10921550 - B1_Mm SINE Alu 0 147 1 1 1228 245 294 34 18 chr17 84351807 84351906 -10920745 - ID4 SINE ID -48 104 2 1 1228 708 186 6 11 chr17 84351923 84352102 -10920549 + (TG)n Simple_repeat Simple_repeat 1 178 0 1 1228 577 255 0 108 chr17 84352161 84352328 -10920323 - B4A SINE B4 -17 275 127 1 1228 408 317 0 0 chr17 84352330 84352475 -10920176 + C-rich Low_complexity Low_complexity 3 147 0 1 1228 285 315 0 33 chr17 84352480 84352572 -10920079 - B4A SINE B4 -202 90 2 1 1228 358 329 20 46 chr17 84352570 84352723 -10919928 - B1F SINE Alu 0 149 1 1 1228 336 285 86 46 chr17 84353326 84353477 -10919174 - RSINE1 SINE B4 -6 159 3 1 1228 200 188 0 0 chr17 84353480 84353512 -10919139 + polypurine Low_complexity Low_complexity 4 35 0 1 1228 225 0 0 0 chr17 84356644 84356669 -10915982 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1228 195 129 0 0 chr17 84356961 84356992 -10915659 + (CCCCCT)n Simple_repeat Simple_repeat 2 32 0 1 1228 399 41 0 0 chr17 84357048 84357097 -10915554 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 1228 337 260 76 48 chr17 84357280 84357385 -10915266 - B1F SINE Alu 0 149 42 1 1228 255 173 0 0 chr17 84359462 84359514 -10913137 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 1228 212 167 0 23 chr17 84361034 84361077 -10911574 + ID4_ SINE ID 42 83 0 1 1228 312 283 130 19 chr17 84361128 84361236 -10911415 - MER5A DNA MER1_type -64 125 6 1 1228 495 0 0 0 chr17 84362850 84362905 -10909746 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1228 301 315 89 38 chr17 84363824 84364049 -10908602 - MIRb SINE MIR -2 260 31 1 1228 712 172 8 0 chr17 84365201 84365323 -10907328 + URR1A DNA MER1_type 3 125 -101 1 1228 966 214 77 25 chr17 84365323 84365558 -10907093 + Lx6 LINE L1 7183 7429 -31 1 1228 446 212 41 25 chr17 84365574 84365695 -10906956 + URR1A DNA MER1_type 103 225 -1 1 1228 245 275 133 57 chr17 84365794 84365952 -10906699 + MIR SINE MIR 58 227 -35 1 1228 287 282 56 84 chr17 84366545 84366688 -10905963 + RSINE1 SINE B4 21 159 -6 1 1228 244 217 42 42 chr17 84367226 84367298 -10905353 + MLT1J LTR MaLR 434 505 -7 1 1228 1137 68 7 20 chr17 84367333 84367483 -10905168 - B1_Mus1 SINE Alu 0 148 1 1 1228 1103 101 6 29 chr17 84367483 84367647 -10905004 - B2_Mm1t SINE B2 -32 161 1 1 1228 1122 88 112 0 chr17 84367649 84367809 -10904842 - B2_Mm2 SINE B2 -16 179 2 1 1228 991 213 37 0 chr17 84367809 84367997 -10904654 - B3 SINE B2 -16 200 6 1 1228 1265 21 7 0 chr17 84368030 84368175 -10904476 - B1_Mus2 SINE Alu 0 147 2 1 1228 542 269 71 11 chr17 84368456 84368640 -10904011 - B3A SINE B2 0 198 4 1 1228 369 0 0 0 chr17 84369873 84369914 -10902737 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1228 459 0 0 0 chr17 84369915 84369966 -10902685 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 1228 1232 150 36 4 chr17 84370006 84370261 -10902390 - BGLII_B LTR ERVK 0 441 111 1 1228 325 194 17 0 chr17 84370572 84370640 -10902011 - MER57-int LTR ERV1 -288 7249 7192 1 1228 841 144 23 0 chr17 84370717 84370849 -10901802 - B1_Mus1 SINE Alu -13 135 1 1 1228 389 281 0 46 chr17 84370879 84370987 -10901664 - B1F SINE Alu -46 103 1 1 1228 453 193 0 0 chr17 84371004 84371092 -10901559 - PB1D9 SINE Alu 0 120 33 1 1228 229 200 169 26 chr17 84371039 84371116 -10901535 - MT2B LTR ERVL -361 240 153 1 1228 352 288 60 16 chr17 84371120 84371399 -10901252 - Charlie5 DNA MER1_type -1 2623 2318 1 1228 447 309 89 0 chr17 84372999 84373167 -10899484 - L2a LINE L2 -1 3425 3243 1 1228 1289 229 40 37 chr17 84373334 84373710 -10898941 - MTEb LTR MaLR -2 377 1 1 1228 281 277 37 76 chr17 84374109 84374237 -10898414 - MLT1A1 LTR MaLR -21 387 248 1 1228 180 0 0 0 chr17 84374237 84374257 -10898394 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1228 261 350 93 93 chr17 84374257 84374493 -10898158 - MLT1A1 LTR MaLR -118 247 1 1 1228 198 0 0 0 chr17 84374519 84374541 -10898110 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 1228 260 230 6 47 chr17 84374598 84374676 -10897975 - PB1D9 SINE Alu -1 119 40 1 1228 361 126 0 33 chr17 84376000 84376090 -10896561 + (TCTG)n Simple_repeat Simple_repeat 2 88 0 1 1228 368 300 16 8 chr17 84376122 84376243 -10896408 - B4 SINE B4 -169 123 2 1 1228 267 306 0 100 chr17 84377841 84377921 -10894730 - B4A SINE B4 0 292 221 1 1228 449 220 0 7 chr17 84377930 84378081 -10894570 + (TA)n Simple_repeat Simple_repeat 1 150 0 1 1228 688 267 75 56 chr17 84378081 84378295 -10894356 - B4A SINE B4 -74 218 1 1 1228 285 283 101 0 chr17 84380517 84380616 -10892035 - ORR1E LTR MaLR -11 368 260 1 1228 394 309 97 20 chr17 84380628 84380823 -10891828 - ORR1E LTR MaLR -149 210 1 1 1228 393 22 0 0 chr17 84381472 84381518 -10891133 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1228 189 0 0 0 chr17 84382774 84382795 -10889856 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1228 378 0 0 0 chr17 84383172 84383214 -10889437 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1228 1842 134 10 16 chr17 84384035 84384339 -10888312 - Lx4A LINE L1 0 7058 6757 1 1228 205 162 0 0 chr17 84385213 84385250 -10887401 + C-rich Low_complexity Low_complexity 1 37 0 1 1228 1309 27 0 0 chr17 84386648 84386796 -10885855 + B1_Mus1 SINE Alu 1 148 0 1 1228 339 339 139 0 chr17 84386813 84386978 -10885673 + MER3 DNA MER1_type 15 202 -7 1 1228 518 282 48 18 chr17 84387552 84387718 -10884933 - MER45A DNA Tip100 -4 174 4 1 1228 414 0 0 0 chr17 84387884 84387930 -10884721 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1228 426 39 0 0 chr17 84387930 84387981 -10884670 + (GA)n Simple_repeat Simple_repeat 1 52 0 1 1228 225 310 0 0 chr17 84387984 84388071 -10884580 + (TG)n Simple_repeat Simple_repeat 2 88 0 1 1228 357 184 0 0 chr17 84388071 84388180 -10884471 + GA-rich Low_complexity Low_complexity 1 109 0 1 1228 265 301 53 11 chr17 84388451 84388545 -10884106 + L1ME1 LINE L1 6077 6174 -5 1 1228 498 285 81 19 chr17 84389074 84389235 -10883416 + ID_B1 SINE B4 1 171 -53 1 1228 341 319 50 7 chr17 84389696 84389835 -10882816 - MIRb SINE MIR -121 147 3 1 1228 311 269 185 0 chr17 84390954 84391073 -10881578 + B1F2 SINE Alu 6 146 -3 1 1228 382 236 0 68 chr17 84391079 84391215 -10881436 + B1F SINE Alu 2 117 -3 1 1228 471 283 105 83 chr17 84391311 84391635 -10881016 - ORR1E LTR MaLR -28 331 1 1 1228 468 312 96 16 chr17 84391844 84392025 -10880626 - B3A SINE B2 -1 215 21 1 1228 660 133 0 0 chr17 84392025 84392145 -10880506 + (CA)n Simple_repeat Simple_repeat 2 121 0 1 1228 824 292 10 0 chr17 84392145 84392347 -10880304 - ID_B1 SINE B4 -15 209 6 1 1228 449 189 25 25 chr17 84393137 84393294 -10879357 + (CATA)n Simple_repeat Simple_repeat 2 158 0 1 1228 279 0 0 0 chr17 84394494 84394525 -10878126 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 1 1228 613 286 213 4 chr17 84394575 84394814 -10877837 + B4 SINE B4 4 292 0 1 1228 40 94 0 0 chr17 84394829 84394946 -10877705 + AT_rich Low_complexity Low_complexity 1 117 0 1 1228 1256 48 0 0 chr17 84395046 84395192 -10877459 - B1_Mus1 SINE Alu 0 148 3 1 1228 288 0 0 0 chr17 84395270 84395302 -10877349 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 1228 1222 84 60 0 chr17 84395302 84395469 -10877182 - B2_Mm2 SINE B2 -17 178 2 1 1228 366 322 105 6 chr17 84395622 84395794 -10876857 - MLT1F LTR MaLR -5 543 355 1 1228 208 222 0 0 chr17 84398117 84398153 -10874498 + polypurine Low_complexity Low_complexity 1 36 0 1 1228 854 177 20 12 chr17 84400196 84400401 -10872250 + B3A SINE B2 5 214 -2 1 1228 360 262 0 86 chr17 84400823 84400940 -10871711 + RSINE1 SINE B4 23 129 -36 1 1228 987 251 29 121 chr17 84401447 84401859 -10870792 + MT2A LTR ERVL 3 376 -157 1 1228 228 258 16 16 chr17 84401962 84402025 -10870626 - MLT1A1 LTR MaLR -276 132 70 1 1228 307 327 10 19 chr17 84402068 84402171 -10870480 - MLT1A0 LTR MaLR -227 138 37 1 1228 774 311 74 9 chr17 84402467 84402791 -10869860 + MER2 DNA MER2_type 1 345 0 1 1228 349 358 69 45 chr17 84402847 84403093 -10869558 + MLT1J-int LTR MaLR 92 343 -1044 1 1228 563 258 9 116 chr17 84403291 84403515 -10869136 + MLT1J-int LTR MaLR 459 658 -729 1 1228 372 339 26 73 chr17 84403511 84403751 -10868900 + MLT1J-int LTR MaLR 861 1128 -259 1 1228 297 369 85 28 chr17 84403950 84404198 -10868453 + MLT1J LTR MaLR 4 265 -247 1 1228 320 181 12 0 chr17 84404683 84404766 -10867885 + CT-rich Low_complexity Low_complexity 1 84 0 1 1228 1205 85 10 92 chr17 84405104 84405311 -10867340 - L1Md_F2 LINE L1 -1 6581 6392 1 1228 345 345 33 101 chr17 84405447 84405850 -10866801 - ORR1E LTR MaLR 0 370 1 1 1228 240 284 27 0 chr17 84406260 84406334 -10866317 + L1MA10 LINE L1 6156 6231 -103 1 1228 352 210 107 107 chr17 84406824 84406936 -10865715 + PB1D10 SINE Alu 3 114 -3 1 1228 270 312 113 38 chr17 84407170 84407383 -10865268 - Charlie7 DNA MER1_type -427 2185 1957 1 1228 22 56 0 0 chr17 84407424 84407460 -10865191 + AT_rich Low_complexity Low_complexity 1 36 0 1 1228 371 295 98 54 chr17 84407467 84407671 -10864980 - B3 SINE B2 -3 213 1 1 1228 943 223 67 19 chr17 84409321 84409531 -10863120 + ID_B1 SINE B4 2 221 -3 1 1228 233 284 48 34 chr17 84409842 84409924 -10862727 - MER53 DNA hAT -45 148 66 1 1228 815 261 42 16 chr17 84409924 84410115 -10862536 - B3 SINE B2 -19 197 2 1 1228 233 284 48 34 chr17 84410115 84410178 -10862473 - MER53 DNA hAT -128 65 2 1 153 236 346 53 45 chr17 84410299 84410432 -10862219 - L2c LINE L2 -161 3226 3093 1 1229 269 233 0 6 chr17 84410439 84410505 -10862146 + B1F SINE Alu 85 148 -2 1 1229 377 348 7 56 chr17 84410959 84411102 -10861549 + MIRc SINE MIR 15 150 -118 1 1229 593 257 20 79 chr17 84411584 84411787 -10860864 + B3A SINE B2 7 197 -1 1 1229 952 120 56 0 chr17 84411797 84411939 -10860712 + B1_Mur4 SINE Alu 1 150 0 1 1229 448 280 15 8 chr17 84412317 84412450 -10860201 + MLT1A LTR MaLR 240 373 -1 1 1229 395 311 27 35 chr17 84414951 84415126 -10857525 + MIR SINE MIR 33 208 -60 1 1229 1201 148 106 24 chr17 84415460 84415667 -10856984 - URR1A DNA MER1_type -2 224 1 1 1229 822 314 63 12 chr17 84415755 84416087 -10856564 - MLT1F LTR MaLR -2 546 198 1 1229 399 181 48 96 chr17 84416087 84416191 -10856460 + URR1B DNA MER1_type 1 99 -126 1 1229 534 318 4 10 chr17 84416244 84416420 -10856231 - MLT1F LTR MaLR -384 185 1 1 1229 285 98 0 0 chr17 84416667 84416708 -10855943 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 1229 495 123 0 0 chr17 84416708 84416789 -10855862 + (CA)n Simple_repeat Simple_repeat 1 81 0 1 1229 216 0 0 0 chr17 84417098 84417122 -10855529 + (GGAA)n Simple_repeat Simple_repeat 3 26 0 1 1229 1130 273 54 3 chr17 84417126 84417420 -10855231 - MTE2b LTR MaLR -70 309 1 1 1229 206 74 55 18 chr17 84417615 84417670 -10854981 + (TTTTG)n Simple_repeat Simple_repeat 3 59 0 1 1229 1801 273 52 38 chr17 84417796 84418473 -10854178 - L1MB7 LINE L1 -72 6112 5427 1 1229 23 0 0 0 chr17 84418525 84418548 -10854103 + AT_rich Low_complexity Low_complexity 1 23 0 1 1229 247 246 66 0 chr17 84418572 84418633 -10854018 - ID4 SINE ID -17 66 2 1 1229 479 254 27 0 chr17 84418640 84418750 -10853901 - B1F SINE Alu -10 139 27 1 1229 358 299 11 42 chr17 84418812 84418930 -10853721 - B1F1 SINE Alu -20 130 10 1 1229 435 287 53 53 chr17 84418941 84419184 -10853467 - L1MB7 LINE L1 -852 5294 5052 1 1229 345 247 42 40 chr17 84419217 84419372 -10853279 - B3A SINE B2 -10 185 34 1 1229 1465 286 37 22 chr17 84419376 84419653 -10852998 - L1MB7 LINE L1 -1183 4963 4680 1 1229 207 0 0 0 chr17 84419653 84419676 -10852975 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 1 1229 1465 286 37 22 chr17 84419676 84419995 -10852656 - L1MB7 LINE L1 -1467 4679 4358 1 1229 1414 309 80 53 chr17 84420009 84420644 -10852007 + MLT1J-int LTR MaLR 705 1356 -31 1 1229 309 357 175 30 chr17 84420656 84420988 -10851663 + MLT1J LTR MaLR 4 383 -129 1 1229 312 399 22 0 chr17 84421076 84421254 -10851397 - L2 LINE L2 -1606 1813 1632 1 1229 706 224 47 37 chr17 84421266 84421456 -10851195 - ORR1D1 LTR MaLR -178 196 5 1 1229 401 218 0 10 chr17 84422656 84422758 -10849893 + Lx LINE L1 6549 6649 -5 1 1229 1270 208 207 3 chr17 84423238 84423576 -10849075 + MTD LTR MaLR 10 416 -3 1 1229 794 249 81 20 chr17 84423853 84424050 -10848601 - B3 SINE B2 -6 210 2 1 1229 293 207 51 39 chr17 84424170 84424326 -10848325 + (ACATG)n Simple_repeat Simple_repeat 4 161 0 1 1229 528 247 20 112 chr17 84424377 84424573 -10848078 - MLT1J LTR MaLR -265 247 70 1 1229 21 0 0 0 chr17 84424587 84424608 -10848043 + AT_rich Low_complexity Low_complexity 1 21 0 1 1229 514 281 76 23 chr17 84424618 84424789 -10847862 - B3A SINE B2 -18 180 1 1 1229 24 0 0 0 chr17 84425362 84425386 -10847265 + GC_rich Low_complexity Low_complexity 1 24 0 1 1229 212 0 0 35 chr17 84426085 84426114 -10846537 + (GGGTG)n Simple_repeat Simple_repeat 3 30 0 1 1229 707 252 71 29 chr17 84426630 84426827 -10845824 - ID_B1 SINE B4 -72 220 7 1 1229 237 244 198 0 chr17 84428445 84428531 -10844120 + PB1D10 SINE Alu 6 108 -9 1 1229 554 185 55 9 chr17 84428548 84428657 -10843994 + PB1D9 SINE Alu 2 115 -5 1 1229 841 278 62 97 chr17 84429061 84429575 -10843076 - MLT1D LTR MaLR 0 505 10 1 1229 504 0 0 0 chr17 84429619 84429675 -10842976 + (TTC)n Simple_repeat Simple_repeat 3 58 0 1 1229 1037 141 0 6 chr17 84429675 84429854 -10842797 + (TCC)n Simple_repeat Simple_repeat 3 180 0 1 1229 515 235 36 22 chr17 84429925 84430064 -10842587 - B1F SINE Alu -8 141 1 1 1229 281 65 0 61 chr17 84430080 84430129 -10842522 + (T)n Simple_repeat Simple_repeat 1 46 0 1 1229 765 180 68 112 chr17 84430129 84430335 -10842316 - B3A SINE B2 0 198 2 1 1229 279 0 0 0 chr17 84430604 84430635 -10842016 + (T)n Simple_repeat Simple_repeat 1 31 0 1 1229 750 290 159 0 chr17 84431391 84431674 -10840977 - MLT1D LTR MaLR -30 475 148 1 1229 724 254 55 186 chr17 84432677 84433112 -10839539 + MTE2a LTR MaLR 2 379 0 1 1229 306 229 16 24 chr17 84434248 84434500 -10838151 + CT-rich Low_complexity Low_complexity 1 249 0 1 1229 628 45 23 0 chr17 84434740 84434828 -10837823 + (TG)n Simple_repeat Simple_repeat 2 91 0 1 1229 275 257 14 26 chr17 84435168 84435256 -10837395 - B1F2 SINE Alu -53 96 9 1 1229 550 291 8 0 chr17 84435203 84435337 -10837314 - B4A SINE B4 -146 146 12 1 1229 341 176 33 52 chr17 84435363 84435468 -10837183 - PB1D9 SINE Alu -15 105 3 1 1229 192 224 40 20 chr17 84435641 84435691 -10836960 + MIRc SINE MIR 22 72 -196 1 1229 215 316 0 38 chr17 84435711 84435790 -10836861 + MIRb SINE MIR 131 206 -62 1 1229 2551 143 42 8 chr17 84435965 84436366 -10836285 + MTC LTR MaLR 5 419 -2 1 1229 545 227 127 0 chr17 84436432 84436582 -10836069 + ID_B1 SINE B4 1 169 -55 1 1229 214 288 25 12 chr17 84437508 84437589 -10835062 + MER5B DNA MER1_type 9 90 -88 1 1229 252 282 88 40 chr17 84438045 84438248 -10834403 + MLT1D LTR MaLR 205 423 -44 1 1229 181 238 57 91 chr17 84438583 84438671 -10833980 + L2a LINE L2 3071 3155 -220 1 1229 223 211 0 0 chr17 84438689 84438727 -10833924 + L2a LINE L2 3375 3412 -14 1 1229 241 253 37 37 chr17 84438803 84438885 -10833766 + ORR1E LTR MaLR 49 130 -229 1 1229 239 167 66 16 chr17 84439102 84439163 -10833488 + ORR1E LTR MaLR 300 363 -16 1 1229 630 157 204 76 chr17 84439188 84439360 -10833291 - B3A SINE B2 -4 194 1 1 1229 605 128 10 0 chr17 84439374 84439476 -10833175 + (TCC)n Simple_repeat Simple_repeat 3 105 0 1 1229 942 209 102 0 chr17 84439483 84439679 -10832972 - B3 SINE B2 0 216 1 1 1229 218 56 0 27 chr17 84439711 84439748 -10832903 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 1 1229 435 218 35 0 chr17 84439881 84439968 -10832683 - B3A SINE B2 -105 93 4 1 1229 213 196 0 0 chr17 84440068 84440119 -10832532 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 1229 372 306 24 59 chr17 84440119 84440289 -10832362 - RSINE1 SINE B4 0 165 2 1 1229 2384 120 114 9 chr17 84440294 84440686 -10831965 - RMER4A LTR ERVK 0 466 30 1 1229 1916 186 193 18 chr17 84440686 84441183 -10831468 - RLTR31A_Mm LTR ERVK 0 584 1 1 1229 2384 120 114 9 chr17 84441183 84441212 -10831439 - RMER4A LTR ERVK -437 29 1 1 1229 270 364 21 7 chr17 84441222 84441363 -10831288 - L1M5 LINE L1 -302 5822 5680 1 1229 290 347 83 28 chr17 84442941 84443122 -10829529 + L2 LINE L2 2502 2692 -727 1 1229 180 0 0 0 chr17 84444866 84444886 -10827765 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1229 2032 79 75 7 chr17 84445767 84446072 -10826579 - ORR1A3 LTR MaLR 0 326 1 1 1229 653 239 91 10 chr17 84446930 84447129 -10825522 + B3 SINE B2 2 216 0 1 1229 293 246 0 0 chr17 84448103 84448160 -10824491 - L2b LINE L2 -2 3373 3317 1 1229 1126 18 47 0 chr17 84449033 84449202 -10823449 + (GGTTG)n Simple_repeat Simple_repeat 2 178 0 1 1229 602 255 99 0 chr17 84449211 84449372 -10823279 - ID_B1 SINE B4 -23 201 25 1 1229 1132 183 9 14 chr17 84449594 84449805 -10822846 + B3 SINE B2 1 210 -6 1 1229 231 204 37 0 chr17 84449904 84449954 -10822697 + ID_B1 SINE B4 105 156 -68 1 1229 522 274 67 0 chr17 84449954 84450089 -10822562 + B1_Mur1 SINE Alu 1 144 -5 1 1229 1088 194 19 5 chr17 84450098 84450305 -10822346 + B3 SINE B2 3 212 -4 1 1229 288 284 0 0 chr17 84450321 84450388 -10822263 + ID_B1 SINE B4 143 209 -15 1 1229 366 23 0 0 chr17 84452176 84452219 -10820432 + (CAGA)n Simple_repeat Simple_repeat 4 46 0 1 1229 1193 263 14 10 chr17 84452843 84453131 -10819520 - MTE2b LTR MaLR -82 297 9 1 1229 256 289 93 34 chr17 84453654 84453772 -10818879 + RCHARR1 DNA MER1_type 82 206 -768 1 1229 3034 110 116 17 chr17 84453817 84454333 -10818318 - RMER2 LTR ERV1 0 567 1 1 1229 2693 226 83 31 chr17 84454333 84454836 -10817815 + RCHARR1 DNA MER1_type 171 703 -271 1 1229 2445 54 32 0 chr17 84454836 84455151 -10817500 - ORR1A2 LTR MaLR 0 327 3 1 1229 2693 226 83 31 chr17 84455151 84455409 -10817242 + RCHARR1 DNA MER1_type 704 971 -3 1 1229 425 316 105 25 chr17 84455466 84455742 -10816909 - L1ME3 LINE L1 -121 6041 5744 1 1229 618 221 175 37 chr17 84455747 84456015 -10816636 + L1M5 LINE L1 5416 5720 -724 1 1229 869 93 0 8 chr17 84457153 84457283 -10815368 + (GAAA)n Simple_repeat Simple_repeat 4 132 0 1 1229 404 328 73 22 chr17 84460401 84460579 -10812072 - MIR SINE MIR -73 189 3 1 1229 662 305 60 83 chr17 84460631 84460700 -10811951 - MLT1G1 LTR MaLR -36 543 469 1 1229 2600 50 12 0 chr17 84460700 84461023 -10811628 + ORR1A2 LTR MaLR 1 327 0 1 1229 662 305 60 83 chr17 84461023 84461289 -10811362 - MLT1G1 LTR MaLR -111 468 216 1 1229 1028 85 7 0 chr17 84461298 84461439 -10811212 + B1_Mus1 SINE Alu 5 146 -2 1 1229 758 252 198 62 chr17 84461830 84462346 -10810305 - L1MC3 LINE L1 0 7785 7293 1 1229 329 350 25 0 chr17 84462379 84462536 -10810115 - L1MC3 LINE L1 -681 7104 6944 1 1229 429 109 0 0 chr17 84463458 84463522 -10809129 + (GA)n Simple_repeat Simple_repeat 1 64 0 1 1229 243 0 0 0 chr17 84463634 84463661 -10808990 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1229 517 213 0 0 chr17 84463825 84463919 -10808732 - RSINE1 SINE B4 -58 107 14 1 1229 378 0 0 0 chr17 84464465 84464507 -10808144 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1229 707 315 82 54 chr17 84464549 84465052 -10807599 + L1MC3 LINE L1 6226 6742 -1043 1 1229 254 299 182 0 chr17 84465091 84465245 -10807406 + L1MC3 LINE L1 6728 6909 -876 1 1229 202 307 191 9 chr17 84465430 84465545 -10807106 + L2a LINE L2 3276 3411 -15 1 1229 734 134 17 0 chr17 84465577 84465696 -10806955 + B1_Mus2 SINE Alu 12 132 -15 1 1229 301 323 77 0 chr17 84467035 84467055 -10805596 + ID_B1 SINE B4 70 153 -71 1 1229 354 276 10 10 chr17 84467055 84467154 -10805497 + PB1D10 SINE Alu 9 107 -10 1 1229 301 323 77 0 chr17 84467154 84467165 -10805486 + ID_B1 SINE B4 154 209 -15 1 1229 235 227 0 0 chr17 84468100 84468144 -10804507 - RMER21A LTR ERV1 -267 680 637 1 1229 231 157 0 0 chr17 84468176 84468227 -10804424 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 1 1229 815 121 0 60 chr17 84468615 84468765 -10803886 - URR1B DNA MER1_type 0 225 85 1 1229 1284 80 11 0 chr17 84468767 84468942 -10803709 + B2_Mm1t SINE B2 3 179 -14 1 1229 324 107 319 18 chr17 84468989 84469102 -10803549 + B2_Mm2 SINE B2 47 193 -2 1 1229 283 229 165 10 chr17 84469086 84469183 -10803468 - URR1B DNA MER1_type -113 112 1 1 1229 1200 111 0 0 chr17 84469574 84469754 -10802897 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1 1229 198 71 0 0 chr17 84469778 84469806 -10802845 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 1 1229 1137 76 0 0 chr17 84469806 84469951 -10802700 - B1_Mus2 SINE Alu -2 145 1 1 1229 758 269 39 0 chr17 84470744 84470952 -10801699 + ID_B1 SINE B4 2 217 -7 1 1229 441 310 38 60 chr17 84470961 84471146 -10801505 + B3A SINE B2 2 182 -16 1 1229 246 258 0 0 chr17 84471150 84471239 -10801412 + (CA)n Simple_repeat Simple_repeat 1 89 0 1 1229 562 25 0 37 chr17 84471243 84471325 -10801326 + (CAGAGA)n Simple_repeat Simple_repeat 6 84 0 1 1229 434 286 56 14 chr17 84471496 84471638 -10801013 - B1F1 SINE Alu -1 148 1 1 1229 288 273 111 41 chr17 84472131 84472303 -10800348 + MIRb SINE MIR 21 204 -64 1 1229 776 191 148 0 chr17 84472356 84472539 -10800112 + B3 SINE B2 1 210 -6 1 1229 978 167 0 0 chr17 84472550 84472802 -10799849 + (TGGA)n Simple_repeat Simple_repeat 1 252 0 1 1229 225 0 0 0 chr17 84473921 84473946 -10798705 + (CAGC)n Simple_repeat Simple_repeat 4 28 0 1 1229 324 0 0 0 chr17 84474174 84474210 -10798441 + (GA)n Simple_repeat Simple_repeat 2 37 0 1 1229 347 222 160 10 chr17 84474282 84474382 -10798269 + L2a LINE L2 3311 3425 -1 1 1229 714 131 13 46 chr17 84475239 84475384 -10797267 + B1_Mus1 SINE Alu 1 148 0 1 1229 481 298 204 3 chr17 84475633 84475946 -10796705 + L1ME2 LINE L1 5648 6023 -141 1 1229 699 241 24 126 chr17 84476470 84476623 -10796028 + ID_B1 SINE B4 2 144 -80 1 1229 612 263 70 75 chr17 84476623 84476723 -10795928 + B3 SINE B2 1 95 -121 1 1229 1184 34 7 0 chr17 84476723 84476869 -10795782 + B1_Mus1 SINE Alu 1 147 -1 1 1229 612 263 70 75 chr17 84476869 84476933 -10795718 + B3 SINE B2 96 165 -51 1 1229 297 0 0 0 chr17 84476933 84476966 -10795685 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1229 612 263 70 75 chr17 84476966 84477014 -10795637 + B3 SINE B2 166 213 -3 1 1229 699 241 24 126 chr17 84477014 84477107 -10795544 + ID_B1 SINE B4 145 223 -1 1 1229 564 15 0 0 chr17 84478501 84478566 -10794085 + (TC)n Simple_repeat Simple_repeat 2 66 0 1 1229 181 30 0 83 chr17 84479486 84479522 -10793129 + (TTAA)n Simple_repeat Simple_repeat 1 33 0 1 1229 472 233 121 23 chr17 84479582 84479714 -10792937 + B1F SINE Alu 4 148 -1 1 1229 495 235 92 8 chr17 84479718 84479838 -10792813 + RSINE1 SINE B4 2 131 -34 1 1229 424 0 36 0 chr17 84479861 84479917 -10792734 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1229 195 257 21 50 chr17 84480464 84480539 -10792112 - MIRb SINE MIR -92 176 106 1 1229 1100 86 34 101 chr17 84480675 84480854 -10791797 + B2_Mm1a SINE B2 1 165 -28 1 1229 1109 74 0 7 chr17 84480854 84481003 -10791648 - B1_Mus1 SINE Alu 0 148 1 1 1229 1100 86 34 101 chr17 84481003 84481030 -10791621 + B2_Mm1a SINE B2 166 193 0 1 1229 1226 27 0 0 chr17 84482452 84482598 -10790053 + B1_Mus1 SINE Alu 2 147 -1 1 1229 258 219 58 47 chr17 84482619 84482705 -10789946 + PB1D10 SINE Alu 10 96 -21 1 1229 267 152 0 0 chr17 84482980 84483026 -10789625 + A-rich Low_complexity Low_complexity 3 48 0 1 1229 210 171 0 0 chr17 84483105 84483140 -10789511 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1 1229 333 0 0 0 chr17 84483148 84483185 -10789466 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1229 551 192 23 39 chr17 84483214 84483344 -10789307 - RSINE1 SINE B4 -35 130 3 1 1229 185 359 13 0 chr17 84484814 84484892 -10787759 + L2a LINE L2 3337 3415 -11 1 1229 230 267 66 13 chr17 84486599 84486675 -10785976 - RSINE1 SINE B4 -72 93 14 1 1229 397 331 30 54 chr17 84486733 84486899 -10785752 + RSINE1 SINE B4 4 165 0 1 1229 639 196 0 32 chr17 84486932 84487117 -10785534 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 1 1229 516 267 0 0 chr17 84487075 84487255 -10785396 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1229 525 228 132 0 chr17 84487725 84487839 -10784812 - ID_B1 SINE B4 0 224 96 1 1229 252 200 67 0 chr17 84488030 84488090 -10784561 - PB1D7 SINE Alu -8 112 49 1 1229 613 335 57 20 chr17 84488118 84488417 -10784234 - MLT1G1-int LTR MaLR -842 567 258 1 1229 293 260 302 0 chr17 84488418 84488514 -10784137 + PB1D10 SINE Alu 1 125 -2 1 1229 471 316 134 46 chr17 84488511 84488816 -10783835 - MLT1G1-int LTR MaLR -1156 333 2 1 1229 252 282 39 0 chr17 84488828 84488906 -10783745 - MLT1G1 LTR MaLR -8 571 491 1 1229 553 246 20 67 chr17 84489228 84489409 -10783242 - B3A SINE B2 0 216 39 1 1229 228 235 20 0 chr17 84489511 84489562 -10783089 + PB1D9 SINE Alu 62 113 -7 1 1229 272 261 80 0 chr17 84489596 84489684 -10782967 - MIRb SINE MIR -149 119 25 1 1229 832 206 5 93 chr17 84490158 84490351 -10782300 + URR1A DNA MER1_type 50 225 -1 1 1229 429 302 6 58 chr17 84490554 84490726 -10781925 + MER91A DNA Tip100 4 166 -30 1 1229 252 77 0 0 chr17 84491047 84491086 -10781565 + (G)n Simple_repeat Simple_repeat 1 39 0 1 1229 277 340 0 0 chr17 84491220 84491317 -10781334 + (CA)n Simple_repeat Simple_repeat 2 98 0 1 1229 198 0 0 0 chr17 84491338 84491360 -10781291 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1 1229 495 48 0 0 chr17 84491888 84491950 -10780701 + (TCTCCC)n Simple_repeat Simple_repeat 1 62 0 1 1229 357 317 43 48 chr17 84491974 84491992 -10780659 - ID_B1 SINE B4 -46 246 188 1 1229 598 157 78 9 chr17 84491992 84492108 -10780543 - B1_Mur1 SINE Alu 0 149 26 1 1229 357 317 43 48 chr17 84492108 84492138 -10780513 - ID_B1 SINE B4 -46 187 79 1 1229 416 51 17 0 chr17 84492242 84492301 -10780350 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 1229 537 214 45 0 chr17 84492305 84492417 -10780234 - RSINE1 SINE B4 -46 119 3 1 1229 293 241 0 0 chr17 84492491 84492549 -10780102 + B3A SINE B2 57 114 -84 1 1229 471 252 46 118 chr17 84492723 84492876 -10779775 + B1_Mus1 SINE Alu 1 142 -6 1 1229 1326 160 97 3 chr17 84492982 84493331 -10779320 + MTC LTR MaLR 16 310 -111 1 1229 987 85 0 0 chr17 84493344 84493485 -10779166 + B1_Mur4 SINE Alu 10 150 0 1 1229 222 191 0 0 chr17 84493485 84493532 -10779119 + GA-rich Low_complexity Low_complexity 3 49 0 1 1229 484 238 155 7 chr17 84493545 84493693 -10778958 + MTC LTR MaLR 210 379 0 1 1229 242 295 16 0 chr17 84493900 84493961 -10778690 + ID4_ SINE ID 16 77 -6 1 1229 268 224 0 0 chr17 84493914 84493963 -10778688 + ID SINE ID 32 80 -144 1 1229 583 261 104 65 chr17 84494252 84494530 -10778121 + B4A SINE B4 2 290 -2 1 1229 376 296 55 101 chr17 84494573 84494731 -10777920 + L1M5 LINE L1 5435 5582 -597 1 1229 375 23 0 0 chr17 84494731 84494775 -10777876 + (TC)n Simple_repeat Simple_repeat 2 45 0 1 1229 1072 83 0 20 chr17 84494775 84494923 -10777728 - B1_Mus2 SINE Alu -2 145 1 1 1229 376 296 55 101 chr17 84494923 84495071 -10777580 + L1M5 LINE L1 5583 5727 -452 1 1229 511 222 0 44 chr17 84495399 84495512 -10777139 + RSINE1 SINE B4 36 143 -22 1 1229 243 0 0 0 chr17 84495536 84495563 -10777088 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1229 191 310 59 73 chr17 84495628 84495764 -10776887 + MER5B DNA MER1_type 44 177 -1 1 1229 354 253 0 44 chr17 84496573 84496664 -10775987 + RSINE1 SINE B4 12 98 -67 1 1229 294 29 0 0 chr17 84497461 84497496 -10775155 + (CAGCC)n Simple_repeat Simple_repeat 3 37 0 1 1229 189 0 0 0 chr17 84498597 84498618 -10774033 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1 1229 529 239 52 7 chr17 84498618 84498753 -10773898 + ID_B1 SINE B4 84 224 0 1 1229 244 333 22 11 chr17 84499628 84499719 -10772932 + MLT1A0 LTR MaLR 271 362 -3 1 1229 520 164 25 17 chr17 84500401 84500519 -10772132 + C-rich Low_complexity Low_complexity 6 124 0 1 1229 270 284 10 59 chr17 84500770 84500871 -10771780 + MER5B DNA MER1_type 8 103 -75 2 1229 345 268 240 40 chr17 84501958 84502133 -10770518 + MER20 DNA MER1_type 4 213 -6 3 1229 528 185 110 9 chr17 84502204 84502313 -10770338 + RSINE1 SINE B4 3 122 -43 4 1229 324 0 0 0 chr17 84502314 84502350 -10770301 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1229 1052 143 0 0 chr17 84502394 84502541 -10770110 - B1_Mur3 SINE Alu 0 149 3 6 1229 180 366 34 63 chr17 84503308 84503515 -10769136 - L4 LINE RTE -137 1892 1692 7 1229 434 331 29 35 chr17 84503678 84503850 -10768801 - L4 LINE RTE -587 1442 1272 7 1229 251 28 28 0 chr17 84504566 84504602 -10768049 + (TAA)n Simple_repeat Simple_repeat 1 37 0 8 1229 441 0 0 0 chr17 84505083 84505132 -10767519 + (CTATG)n Simple_repeat Simple_repeat 4 52 0 9 1229 396 284 56 100 chr17 84505323 84505503 -10767148 + Tigger5 DNA MER2_type 20 191 -2215 1 1229 369 0 0 0 chr17 84505518 84505559 -10767092 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1229 369 58 0 0 chr17 84505559 84505610 -10767041 + (CAGAGA)n Simple_repeat Simple_repeat 3 54 0 1 1229 783 286 87 75 chr17 84505616 84505949 -10766702 - MLT2D LTR ERVL -64 350 14 1 1229 599 297 74 60 chr17 84506089 84506552 -10766099 - MLT1H LTR MaLR -13 536 1 1 1229 546 169 217 17 chr17 84506805 84506925 -10765726 - B1_Mus2 SINE Alu -1 146 3 1 1229 248 287 95 69 chr17 84507047 84507163 -10765488 - RSINE1 SINE B4 -2 163 45 1 1229 981 71 14 0 chr17 84507281 84507421 -10765230 + B1_Mus1 SINE Alu 7 148 0 1 1229 221 75 25 0 chr17 84507953 84507993 -10764658 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1229 501 71 0 0 chr17 84508109 84508179 -10764472 + (TG)n Simple_repeat Simple_repeat 2 71 0 1 1229 250 291 39 79 chr17 84508341 84508468 -10764183 + B4A SINE B4 2 123 -169 2 1229 700 241 41 0 chr17 84508597 84508742 -10763909 + RSINE1 SINE B4 15 165 0 2 1229 211 200 0 0 chr17 84508744 84508794 -10763857 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1229 912 265 24 0 chr17 84508849 84509060 -10763591 + B3 SINE B2 1 216 0 2 1229 285 283 33 98 chr17 84509861 84510014 -10762637 + L1M5 LINE L1 5461 5603 -2392 2 1229 514 137 242 25 chr17 84510015 84510135 -10762516 + B1_Mus1 SINE Alu 2 147 -1 2 1229 192 77 0 0 chr17 84510156 84510182 -10762469 + (GA)n Simple_repeat Simple_repeat 2 27 0 2 1229 993 144 0 0 chr17 84510849 84511170 -10761481 + (CA)n Simple_repeat Simple_repeat 1 321 0 2 1229 304 135 19 0 chr17 84511170 84511222 -10761429 + HAL1-3A_ME LINE L1 1975 2027 -831 2 1229 180 333 12 37 chr17 84511241 84511322 -10761329 - MIRb SINE MIR -79 189 111 2 1229 287 290 63 35 chr17 84512422 84512565 -10760086 - MER20 DNA MER1_type -57 162 16 3 1229 282 314 8 46 chr17 84512578 84512592 -10760059 - YREP_Mm Unknown Unknown -1506 306 182 3 1229 559 198 52 0 chr17 84512592 84512708 -10759943 + B1F SINE Alu 23 144 -5 3 1229 202 234 62 15 chr17 84512865 84512930 -10759721 - L2b LINE L2 -183 3192 3125 3 1229 212 260 139 25 chr17 84514082 84514161 -10758490 + PB1 SINE Alu 36 123 -4 3 1229 399 296 16 16 chr17 84516631 84516758 -10755893 + PB1 SINE Alu 1 127 0 3 1229 510 244 53 0 chr17 84516773 84516799 -10755852 + B1_Mur1 SINE Alu 10 36 -113 3 1229 450 0 0 0 chr17 84516799 84516849 -10755802 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1229 510 244 53 0 chr17 84516849 84516953 -10755698 + B1_Mur1 SINE Alu 37 146 -3 3 1229 244 64 21 21 chr17 84516954 84517002 -10755649 + (CAA)n Simple_repeat Simple_repeat 1 48 0 3 1229 186 43 0 0 chr17 84519286 84519309 -10753342 + (CAG)n Simple_repeat Simple_repeat 1 23 0 3 1229 238 182 0 0 chr17 84520063 84520107 -10752544 + MLT1G1 LTR MaLR 123 166 -383 4 1229 360 280 11 0 chr17 84520145 84520238 -10752413 + (CA)n Simple_repeat Simple_repeat 1 94 0 4 1229 24 0 0 0 chr17 84520262 84520286 -10752365 + AT_rich Low_complexity Low_complexity 1 24 0 4 1229 359 313 78 9 chr17 84520290 84520406 -10752245 + ID_B1 SINE B4 99 222 -2 4 1229 382 200 0 120 chr17 84520589 84520697 -10751954 - PB1D10 SINE Alu -5 112 18 4 1229 278 178 123 0 chr17 84520933 84521006 -10751645 + MLT1G1 LTR MaLR 460 541 -38 4 1229 339 169 96 27 chr17 84521036 84521109 -10751542 - ID_B1 SINE B4 -1 223 146 4 1229 966 176 0 0 chr17 84521212 84521360 -10751291 + B1_Mur1 SINE Alu 2 149 0 4 1229 1095 184 60 0 chr17 84521360 84521560 -10751091 - B3 SINE B2 -3 213 1 4 1229 463 182 91 0 chr17 84521630 84521718 -10750933 - PB1D9 SINE Alu -3 117 22 4 1229 244 341 55 0 chr17 84521656 84521747 -10750904 - B4A SINE B4 -124 168 73 4 1229 277 349 7 7 chr17 84521762 84521915 -10750736 + RLTR22_Mur LTR ERVK 1307 1459 -389 5 1229 214 227 22 22 chr17 84521919 84522009 -10750642 + (TATG)n Simple_repeat Simple_repeat 1 90 0 5 1229 231 281 0 17 chr17 84522021 84522079 -10750572 - RSINE1 SINE B4 -107 58 2 5 1229 428 225 74 47 chr17 84522081 84522230 -10750421 - ID_B1 SINE B4 -70 154 2 4 1229 846 284 58 55 chr17 84522928 84523308 -10749343 - MLT1L LTR MaLR -12 598 218 5 1229 606 71 0 0 chr17 84523597 84523681 -10748970 + (TCTCCC)n Simple_repeat Simple_repeat 5 88 0 5 1229 577 270 0 0 chr17 84523813 84523939 -10748712 - B1F SINE Alu -18 131 6 5 1229 358 269 0 11 chr17 84523967 84524061 -10748590 - PB1D10 SINE Alu 0 117 25 5 1229 720 129 0 61 chr17 84524123 84524255 -10748396 + B1_Mus1 SINE Alu 18 141 -7 5 1229 477 90 0 0 chr17 84524256 84524323 -10748328 + (GA)n Simple_repeat Simple_repeat 1 67 0 5 1229 441 0 0 0 chr17 84524333 84524382 -10748269 + (ACTG)n Simple_repeat Simple_repeat 2 50 0 5 1229 503 195 0 8 chr17 84524777 84524901 -10747750 + CT-rich Low_complexity Low_complexity 2 124 0 6 1229 527 29 14 0 chr17 84525128 84525197 -10747454 + (TGGA)n Simple_repeat Simple_repeat 3 72 0 6 1229 234 0 0 0 chr17 84525232 84525258 -10747393 + (CAGA)n Simple_repeat Simple_repeat 2 27 0 6 1229 222 91 0 0 chr17 84525494 84525527 -10747124 + (TGGA)n Simple_repeat Simple_repeat 2 34 0 6 1229 214 248 27 82 chr17 84525868 84525978 -10746673 + MIRb SINE MIR 35 138 -130 6 1229 261 0 0 0 chr17 84527080 84527109 -10745542 + (CTAA)n Simple_repeat Simple_repeat 1 29 0 6 1229 216 0 0 0 chr17 84527195 84527219 -10745432 + (GCCTG)n Simple_repeat Simple_repeat 4 27 0 6 1229 2471 180 9 5 chr17 84527256 84527675 -10744976 - MTC LTR MaLR 0 421 1 6 1229 2158 133 99 2 chr17 84527755 84528148 -10744503 + BGLII_B LTR ERVK 11 441 0 6 1229 806 231 54 64 chr17 84529079 84529282 -10743369 + ID_B1 SINE B4 15 215 -9 6 1229 552 194 50 134 chr17 84529329 84529508 -10743143 + RSINE1 SINE B4 2 165 0 7 1229 283 308 87 48 chr17 84529664 84529790 -10742861 + ID_B1 SINE B4 94 224 0 7 1229 659 229 87 32 chr17 84529798 84529983 -10742668 + B3A SINE B2 3 197 -1 7 1229 1081 91 152 0 chr17 84530128 84530293 -10742358 + B2_Mm1t SINE B2 2 191 -2 7 1229 325 243 123 41 chr17 84530903 84531049 -10741602 + MTEb LTR MaLR 184 341 -38 7 1229 333 0 0 0 chr17 84531567 84531604 -10741047 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1229 302 318 110 38 chr17 84531616 84531825 -10740826 - MIRc SINE MIR -38 230 7 7 1229 350 159 0 14 chr17 84531864 84531934 -10740717 + CT-rich Low_complexity Low_complexity 1 69 0 7 1229 317 322 33 0 chr17 84531934 84532024 -10740627 - PB1D10 SINE Alu -11 106 14 7 1229 228 347 28 65 chr17 84531945 84532053 -10740598 - ID_B1 SINE B4 -48 176 73 7 1229 254 127 27 27 chr17 84532068 84532141 -10740510 + (TG)n Simple_repeat Simple_repeat 1 73 0 8 1229 187 140 20 20 chr17 84532243 84532294 -10740357 + (TATG)n Simple_repeat Simple_repeat 2 52 0 8 1229 402 192 26 41 chr17 84532304 84532579 -10740072 + (TATATG)n Simple_repeat Simple_repeat 1 270 0 8 1229 233 200 0 68 chr17 84532605 84532664 -10739987 - RSINE1 SINE B4 0 165 111 8 1229 384 272 36 117 chr17 84532633 84532692 -10739959 - B4A SINE B4 -6 286 235 8 1229 2149 116 184 11 chr17 84532692 84533050 -10739601 + MTC LTR MaLR 2 421 0 8 1229 384 272 36 117 chr17 84533050 84533186 -10739465 - B4A SINE B4 -58 234 107 8 1229 814 171 116 0 chr17 84533323 84533487 -10739164 + URR1B DNA MER1_type 43 225 0 8 1229 584 280 7 7 chr17 84533487 84533629 -10739022 + RSINE1 SINE B4 17 158 -7 8 1229 348 289 33 126 chr17 84533939 84534121 -10738530 + RSINE1 SINE B4 1 165 0 8 1229 348 223 83 55 chr17 84534343 84534452 -10738199 + HAL1-3A_ME LINE L1 1907 2018 -840 8 1229 536 152 32 38 chr17 84534494 84534651 -10738000 + (CATATA)n Simple_repeat Simple_repeat 1 156 0 9 1229 384 22 0 0 chr17 84536079 84536124 -10736527 + (TCCC)n Simple_repeat Simple_repeat 1 45 0 9 1229 426 210 48 40 chr17 84537638 84537762 -10734889 - MIRb SINE MIR -57 211 87 9 1229 548 320 39 8 chr17 84538774 84538979 -10733672 + ID_B1 SINE B4 12 218 -74 9 1229 3534 30 2 0 chr17 84538979 84539374 -10733277 - MTA_Mm LTR MaLR 0 396 1 9 1229 293 335 97 77 chr17 84539374 84539429 -10733222 + B4A SINE B4 219 277 -15 9 1229 423 0 0 0 chr17 84539434 84539481 -10733170 + (CA)n Simple_repeat Simple_repeat 1 47 0 9 1230 921 246 34 15 chr17 84543234 84543440 -10729211 - ID_B1 SINE B4 -13 211 2 9 1230 556 234 9 0 chr17 84543935 84544042 -10728609 + ID_B1 SINE B4 9 116 -108 9 1230 249 200 0 20 chr17 84544037 84544088 -10728563 + B1F SINE Alu 77 126 -23 9 1230 537 16 0 0 chr17 84544096 84544158 -10728493 + (TAGA)n Simple_repeat Simple_repeat 4 65 0 9 1230 469 246 18 0 chr17 84544539 84544649 -10728002 + B1F2 SINE Alu 31 142 -7 1 1230 219 36 0 0 chr17 84544675 84544703 -10727948 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 1230 467 216 57 49 chr17 84546936 84547058 -10725593 - B1_Mur2 SINE Alu -26 123 1 1 1230 35 54 0 0 chr17 84547598 84547654 -10724997 + AT_rich Low_complexity Low_complexity 1 56 0 1 1230 344 282 88 26 chr17 84547654 84547767 -10724884 - B1_Mur3 SINE Alu -29 120 1 1 1230 221 219 23 57 chr17 84548648 84548724 -10723927 + MIRb SINE MIR 119 194 -68 1 1230 411 193 34 11 chr17 84548827 84548916 -10723735 - ID_B1 SINE B4 -55 169 79 1 1230 21 0 0 0 chr17 84548923 84548944 -10723707 + AT_rich Low_complexity Low_complexity 1 21 0 1 1230 261 0 0 0 chr17 84549482 84549511 -10723140 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 1 1230 665 235 147 21 chr17 84550009 84550200 -10722451 - B3 SINE B2 -1 215 1 1 1230 413 189 57 105 chr17 84550221 84550314 -10722337 - B1_Mur2 SINE Alu -7 142 53 1 1230 1662 21 21 0 chr17 84550314 84550503 -10722148 + B2_Mm1a SINE B2 1 193 0 1 1230 413 189 57 105 chr17 84550503 84550533 -10722118 - B1_Mur2 SINE Alu -97 52 25 1 1230 432 55 0 0 chr17 84550536 84550591 -10722060 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1230 435 315 0 0 chr17 84550598 84550709 -10721942 - B3A SINE B2 -86 112 2 1 1230 227 358 0 0 chr17 84553334 84553415 -10719236 - MER81 DNA AcHobo -1 113 33 1 1230 831 194 119 10 chr17 84554506 84554699 -10717952 + B3 SINE B2 3 216 0 1 1230 1254 48 0 0 chr17 84554725 84554872 -10717779 - B1_Mus1 SINE Alu 0 148 2 1 1230 371 306 33 18 chr17 84556204 84556421 -10716230 - MIRb SINE MIR -24 244 22 1 1230 359 298 87 33 chr17 84557871 84558055 -10714596 + B3A SINE B2 1 194 -4 1 1230 394 250 0 86 chr17 84558075 84558180 -10714471 + MT2B LTR ERVL 162 257 -344 1 1230 627 175 78 16 chr17 84558088 84558216 -10714435 + B1_Mm SINE Alu 11 146 -1 1 1230 306 125 0 0 chr17 84558241 84558289 -10714362 + (GGGA)n Simple_repeat Simple_repeat 1 48 0 1 1230 385 159 0 24 chr17 84559186 84559270 -10713381 + CT-rich Low_complexity Low_complexity 3 84 0 1 1230 945 70 0 0 chr17 84559270 84559399 -10713252 - B1_Mus2 SINE Alu 0 147 19 1 1230 1069 288 198 21 chr17 84561231 84561545 -10711106 - L1MC1 LINE L1 -117 6216 5855 1 1230 1047 176 9 23 chr17 84561545 84561760 -10710891 + B3 SINE B2 1 212 -4 1 1230 1069 280 125 32 chr17 84561760 84562136 -10710515 - L1MC1 LINE L1 -479 5854 5435 1 1230 183 80 0 0 chr17 84562136 84562161 -10710490 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 1230 188 284 57 0 chr17 84563231 84563319 -10709332 - MIR SINE MIR -128 134 42 1 1230 758 127 63 0 chr17 84564108 84564234 -10708417 - B1_Mur3 SINE Alu 0 149 16 1 1230 272 342 0 41 chr17 84564814 84565102 -10707549 + G-rich Low_complexity Low_complexity 1 276 0 1 1230 642 154 203 0 chr17 84565345 84565488 -10707163 + URR1A DNA MER1_type 1 172 -54 1 1230 269 207 0 17 chr17 84565705 84565764 -10706887 - ID4 SINE ID -20 63 6 1 1230 396 0 0 0 chr17 84567005 84567049 -10705602 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1230 3187 36 2 8 chr17 84567200 84567597 -10705054 + MTA_Mm LTR MaLR 2 396 0 1 1230 1262 92 32 0 chr17 84567779 84567964 -10704687 - B2_Mm1t SINE B2 -2 191 1 1 1230 24420 117 35 16 chr17 84568005 84572337 -10700314 + L1_Mus1 LINE L1 380 5004 -882 1 1230 1178 48 0 0 chr17 84572337 84572484 -10700167 + B1_Mm SINE Alu 1 147 0 1 1230 24420 97 21 17 chr17 84572484 84572636 -10700015 + L1_Mus1 LINE L1 5002 5112 -771 1 1230 1410 64 27 0 chr17 84572636 84572824 -10699827 + B2_Mm1a SINE B2 1 193 0 1 1230 24420 70 9 10 chr17 84572824 84574292 -10698359 + L1_Mus1 LINE L1 5113 6567 0 1 1230 943 55 0 0 chr17 84574352 84574479 -10698172 - B1_Mus2 SINE Alu 0 147 21 1 1230 245 339 71 0 chr17 84574480 84574607 -10698044 - ID_B1 SINE B4 -77 147 12 1 1230 603 211 73 26 chr17 84574907 84575058 -10697593 + B3A SINE B2 6 164 -34 1 1230 456 62 0 0 chr17 84575058 84575122 -10697529 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 1230 603 235 26 13 chr17 84575122 84575138 -10697513 + B3A SINE B2 165 180 -18 1 1230 643 253 103 37 chr17 84576076 84576347 -10696304 + RLTR15 LTR ERVK 3 291 -68 1 1230 1055 75 0 7 chr17 84576357 84576504 -10696147 + B1_Mm SINE Alu 2 147 0 1 1230 1235 91 21 21 chr17 84576550 84576740 -10695911 + B2_Mm1t SINE B2 2 191 -2 1 1230 261 284 119 17 chr17 84577134 84577252 -10695399 - ID_B1 SINE B4 -9 215 86 1 1230 1088 75 0 7 chr17 84577436 84577584 -10695067 + B1_Mm SINE Alu 1 147 0 1 1230 685 200 0 8 chr17 84577609 84577740 -10694911 - B1_Mus2 SINE Alu -17 130 1 1 1230 505 246 0 53 chr17 84577781 84577914 -10694737 - B3 SINE B2 -1 215 90 1 1230 446 189 11 32 chr17 84577933 84578026 -10694625 - ID_B1 SINE B4 -13 211 121 1 1230 354 295 0 0 chr17 84578087 84578182 -10694469 - B1F1 SINE Alu -32 117 23 1 1230 264 303 62 27 chr17 84578182 84578199 -10694452 - ID_B1 SINE B4 -29 195 80 1 1230 452 277 0 0 chr17 84578207 84578308 -10694343 - ID_B1 SINE B4 -6 218 118 1 1230 225 0 0 0 chr17 84578446 84578471 -10694180 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 1 1230 307 255 19 29 chr17 84578644 84578749 -10693902 + L1M4 LINE L1 5733 5836 -338 1 1230 541 168 70 9 chr17 84579115 84579229 -10693422 - B1_Mur2 SINE Alu -5 144 24 1 1230 185 0 0 39 chr17 84579399 84579425 -10693226 + (CACAG)n Simple_repeat Simple_repeat 3 27 0 1 1230 192 182 0 0 chr17 84580412 84580456 -10692195 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1230 252 167 33 16 chr17 84581071 84581132 -10691519 + PB1 SINE Alu 1 62 -65 1 1230 288 0 0 0 chr17 84582279 84582311 -10690340 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1230 228 35 0 0 chr17 84584899 84584928 -10687723 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1 1230 27 29 0 0 chr17 84585293 84585327 -10687324 + GC_rich Low_complexity Low_complexity 1 34 0 1 1230 22 0 0 0 chr17 84585380 84585402 -10687249 + GC_rich Low_complexity Low_complexity 1 22 0 1 1230 239 218 0 0 chr17 84585609 84585664 -10686987 + GA-rich Low_complexity Low_complexity 2 56 0 1 1230 27 29 0 0 chr17 84585848 84585882 -10686769 + GC_rich Low_complexity Low_complexity 1 34 0 1 1230 26 0 0 0 chr17 84587229 84587255 -10685396 + GC_rich Low_complexity Low_complexity 1 26 0 1 1230 243 61 0 0 chr17 84587469 84587502 -10685149 + (GGGGA)n Simple_repeat Simple_repeat 1 33 0 1 1230 232 302 102 102 chr17 84588841 84588959 -10683692 + PB1D7 SINE Alu 2 119 -1 1 1230 495 228 17 26 chr17 84589545 84589662 -10682989 + PB1D10 SINE Alu 2 117 0 1 1230 402 303 19 58 chr17 84590182 84590336 -10682315 + RSINE1 SINE B4 3 150 -15 1 1230 180 0 0 0 chr17 84590876 84590896 -10681755 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 1230 180 0 0 0 chr17 84590915 84590935 -10681716 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 1230 339 25 0 0 chr17 84590935 84590974 -10681677 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 1230 243 260 68 0 chr17 84593172 84593245 -10679406 - MER58B DNA MER1_type -117 224 147 1 1230 369 216 162 0 chr17 84593289 84593400 -10679251 - ID_B1 SINE B4 -15 209 81 1 1230 352 308 118 31 chr17 84593392 84593553 -10679098 - ID_B1 SINE B4 -48 176 2 1 1230 432 178 19 9 chr17 84594831 84594939 -10677712 + CT-rich Low_complexity Low_complexity 2 110 0 1 1230 585 227 17 0 chr17 84595010 84595129 -10677522 + B1_Mur1 SINE Alu 2 122 -27 1 1230 260 248 17 110 chr17 84595610 84595728 -10676923 + L1M4 LINE L1 4667 4773 -1373 1 1230 222 197 33 0 chr17 84595735 84595796 -10676855 + (CAGA)n Simple_repeat Simple_repeat 2 64 0 1 1230 253 260 52 0 chr17 84595800 84595896 -10676755 - B3A SINE B2 -29 169 69 1 1230 3335 25 5 0 chr17 84596748 84597142 -10675509 + MTA_Mm LTR MaLR 1 396 0 1 1230 310 312 70 76 chr17 84597406 84597682 -10674969 + LTR33 LTR ERVL 12 286 -245 1 1230 459 308 75 8 chr17 84598436 84598570 -10674081 - ID_B1 SINE B4 0 224 82 1 1230 683 236 22 33 chr17 84598655 84598839 -10673812 - B3A SINE B2 -16 182 1 1 1230 568 202 18 0 chr17 84598951 84599065 -10673586 - B1_Mur1 SINE Alu 0 149 34 1 1230 239 287 0 168 chr17 84599000 84599113 -10673538 - RLTR25A LTR ERVK -531 572 479 1 1230 210 264 127 36 chr17 84600153 84600263 -10672388 - RSINE1 SINE B4 -2 163 44 1 1230 641 272 142 21 chr17 84600365 84600811 -10671840 + L1MB5 LINE L1 5601 6142 -32 1 1230 382 263 219 0 chr17 84600811 84600925 -10671726 + RSINE1 SINE B4 3 141 -24 1 1230 1026 97 7 0 chr17 84601013 84601158 -10671493 - B1_Mus2 SINE Alu 0 147 2 1 1230 961 104 72 7 chr17 84601162 84601326 -10671325 - B2_Mm2 SINE B2 -1 197 27 1 1230 1132 54 0 26 chr17 84601326 84601478 -10671173 - B1_Mus1 SINE Alu 0 148 1 1 1230 436 257 108 138 chr17 84601478 84601520 -10671131 - B3A SINE B2 -156 42 1 1 1230 639 214 151 26 chr17 84601523 84601715 -10670936 - B3 SINE B2 0 216 1 1 1230 1251 53 0 17 chr17 84601878 84602050 -10670601 + B2_Mm2 SINE B2 1 169 -26 1 1230 651 88 0 0 chr17 84602056 84602147 -10670504 + (GAAA)n Simple_repeat Simple_repeat 4 94 0 1 1230 309 109 0 0 chr17 84602295 84602341 -10670310 + (GAAAA)n Simple_repeat Simple_repeat 4 49 0 1 1230 189 292 33 11 chr17 84603297 84603387 -10669264 + L2 LINE L2 784 875 -2544 1 1230 475 273 150 91 chr17 84603487 84603776 -10668875 - ORR1E LTR MaLR -67 303 1 1 1230 1684 226 156 34 chr17 84603784 84604251 -10668400 - ORR1E-int LTR MaLR -9 1361 838 1 1230 1294 291 142 64 chr17 84604264 84604907 -10667744 - ORR1E-int LTR MaLR -623 747 58 1 1230 180 0 0 0 chr17 84604907 84604927 -10667724 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 1230 1294 291 142 64 chr17 84604927 84604973 -10667678 - ORR1E-int LTR MaLR -1313 57 6 1 1230 243 175 275 0 chr17 84604981 84605061 -10667590 - ORR1E LTR MaLR -9 361 260 1 1230 563 288 128 16 chr17 84605056 84605243 -10667408 + ORR1E LTR MaLR 21 228 -131 1 1230 180 200 0 0 chr17 84605539 84605584 -10667067 + (CTA)n Simple_repeat Simple_repeat 1 45 0 2 1230 252 0 0 0 chr17 84606851 84606879 -10665772 + (AGGGGG)n Simple_repeat Simple_repeat 2 29 0 2 1230 1126 75 0 0 chr17 84607484 84607630 -10665021 + B1_Mus2 SINE Alu 2 147 0 2 1230 225 0 0 0 chr17 84607630 84607655 -10664996 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1230 296 347 69 17 chr17 84607753 84607926 -10664725 - MER53 DNA hAT -6 187 6 2 1230 25 31 0 0 chr17 84608808 84608840 -10663811 + AT_rich Low_complexity Low_complexity 1 32 0 2 1230 515 279 65 7 chr17 84608857 84609012 -10663639 - RSINE1 SINE B4 0 165 2 2 1230 180 0 0 0 chr17 84609097 84609117 -10663534 + (CAG)n Simple_repeat Simple_repeat 1 20 0 2 1230 1574 37 0 0 chr17 84609300 84609491 -10663160 - B2_Mm1a SINE B2 -1 192 2 2 1230 346 138 62 0 chr17 84609802 84609867 -10662784 - B4A SINE B4 -8 284 216 2 1230 581 321 31 0 chr17 84609903 84610062 -10662589 - RSINE1 SINE B4 0 165 2 2 1230 878 221 62 40 chr17 84610062 84610288 -10662363 - B4A SINE B4 -61 231 1 2 1230 462 277 28 41 chr17 84610373 84610527 -10662124 - PB1 SINE Alu -3 146 4 2 1230 391 279 136 75 chr17 84610583 84610869 -10661782 - B4A SINE B4 -16 276 9 2 1230 223 286 32 0 chr17 84610960 84611023 -10661628 - ID4_ SINE ID -3 80 16 2 1230 366 240 55 55 chr17 84611174 84611302 -10661349 + B3 SINE B2 89 216 0 2 1230 356 333 8 17 chr17 84611316 84611435 -10661216 + RSINE1 SINE B4 48 165 0 2 1230 381 240 27 55 chr17 84611937 84612047 -10660604 - B3 SINE B2 0 216 110 2 1230 720 64 0 0 chr17 84612279 84612373 -10660278 + (TC)n Simple_repeat Simple_repeat 2 95 0 2 1230 352 73 46 58 chr17 84612383 84612470 -10660181 + CT-rich Low_complexity Low_complexity 5 90 0 2 1230 658 126 145 30 chr17 84612481 84612612 -10660039 - B1_Mur2 SINE Alu -2 147 2 2 1230 366 291 104 90 chr17 84612748 84613027 -10659624 + MLT1J LTR MaLR 121 403 -109 2 1230 381 256 151 40 chr17 84613124 84613250 -10659401 + B1F SINE Alu 10 149 0 2 1230 313 239 42 14 chr17 84613258 84613330 -10659321 + ID4_ SINE ID 8 81 -2 2 1230 224 333 120 30 chr17 84613330 84613389 -10659262 + B3 SINE B2 7 149 -67 2 1230 441 0 0 0 chr17 84613391 84613440 -10659211 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1230 238 253 33 88 chr17 84613451 84613542 -10659109 - ID_B1 SINE B4 -1 223 138 2 1230 1626 37 16 0 chr17 84613673 84613863 -10658788 + B2_Mm1a SINE B2 1 193 0 2 1230 499 314 153 0 chr17 84613902 84614144 -10658507 + B4A SINE B4 5 283 -9 2 1230 726 203 15 0 chr17 84614166 84614299 -10658352 + B1_Mur2 SINE Alu 2 136 -13 2 1230 946 151 14 14 chr17 84616046 84616194 -10656457 - B1_Mur4 SINE Alu -1 149 2 2 1230 332 318 131 5 chr17 84616620 84616819 -10655832 + MLT1J LTR MaLR 237 460 -52 2 1230 607 165 72 18 chr17 84617039 84617150 -10655501 - PB1D9 SINE Alu 0 120 4 2 1230 297 0 0 0 chr17 84617733 84617766 -10654885 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 2 1230 537 235 164 84 chr17 84617924 84618138 -10654513 + B4A SINE B4 3 233 -59 2 1230 3040 20 6 0 chr17 84618391 84618735 -10653916 + ORR1A0 LTR MaLR 1 346 0 2 1230 293 296 109 22 chr17 84619776 84619790 -10652861 + B1_Mur4 SINE Alu 1 85 -65 2 1230 448 226 78 9 chr17 84619790 84619906 -10652745 + ID_B1 SINE B4 95 218 -6 2 1230 328 151 0 0 chr17 84620071 84620124 -10652527 + B3A SINE B2 1 53 -145 2 1230 34 24 0 0 chr17 84620124 84620165 -10652486 + AT_rich Low_complexity Low_complexity 1 41 0 2 1230 886 215 17 11 chr17 84620165 84620344 -10652307 - B3 SINE B2 -5 211 32 2 1230 827 163 7 28 chr17 84620375 84620520 -10652131 - B1_Mus1 SINE Alu 0 148 7 2 1230 1171 105 40 17 chr17 84620741 84620916 -10651735 - B2_Mm2 SINE B2 -16 179 1 2 1230 399 124 16 0 chr17 84620921 84620992 -10651659 - B1_Mur2 SINE Alu -21 129 57 2 1230 220 259 178 11 chr17 84621084 84621174 -10651477 - L2a LINE L2 0 3426 3322 2 1230 374 242 66 0 chr17 84621177 84621268 -10651383 + B1F SINE Alu 32 128 -21 2 1230 705 208 6 11 chr17 84621286 84621466 -10651185 + CT-rich Low_complexity Low_complexity 1 179 0 2 1230 374 174 43 14 chr17 84621493 84621563 -10651088 - B3 SINE B2 -144 72 1 2 1230 641 172 63 39 chr17 84622456 84622583 -10650068 + B1_Mur2 SINE Alu 18 147 -2 2 1230 423 197 33 13 chr17 84622591 84622685 -10649966 + B1F SINE Alu 10 148 -1 2 1230 488 267 7 37 chr17 84623229 84623365 -10649286 - ID_B1 SINE B4 -2 222 91 2 1230 458 235 19 29 chr17 84624671 84624776 -10647875 + PB1D10 SINE Alu 5 108 -9 2 1230 817 169 7 29 chr17 84625003 84625143 -10647508 - B1_Mus2 SINE Alu -10 137 1 2 1230 731 161 26 20 chr17 84625500 84625652 -10646999 - RMER10B LTR ERVL -51 347 195 2 1230 443 241 35 9 chr17 84625967 84626080 -10646571 - PB1D10 SINE Alu 0 117 2 2 1230 458 272 81 11 chr17 84627765 84627951 -10644700 - Lx8 LINE L1 -308 7165 6967 2 1230 374 298 21 0 chr17 84628636 84628730 -10643921 - PB1D10 SINE Alu -11 106 11 2 1230 632 269 94 0 chr17 84628646 84628806 -10643845 - ID_B1 SINE B4 -49 175 1 2 1230 242 281 55 0 chr17 84629481 84629568 -10643083 - PB1D10 SINE Alu 0 127 29 2 1230 337 269 204 21 chr17 84629647 84629882 -10642769 - B4A SINE B4 -14 278 1 2 1230 196 190 0 23 chr17 84631026 84631069 -10641582 - L3 LINE CR1 -537 3952 3911 2 1230 948 232 14 23 chr17 84631448 84631664 -10640987 + B3 SINE B2 3 216 0 2 1230 483 257 9 0 chr17 84631678 84631791 -10640860 + PB1D10 SINE Alu 1 114 -3 2 1230 264 292 101 0 chr17 84632308 84632397 -10640254 - MIRc SINE MIR -82 186 89 2 1230 1702 171 132 26 chr17 84632415 84632794 -10639857 + MTC LTR MaLR 1 419 -2 2 1230 484 234 42 91 chr17 84632877 84633082 -10639569 + B3A SINE B2 1 186 -9 2 1230 258 214 140 18 chr17 84633314 84633371 -10639280 - B4 SINE B4 -209 83 20 2 1230 251 312 13 25 chr17 84633524 84633603 -10639048 - ID_B1 SINE B4 -125 99 22 2 1230 469 280 19 9 chr17 84633652 84633760 -10638891 - B1F SINE Alu -39 110 2 2 1230 850 31 48 77 chr17 84634127 84634438 -10638213 + (CAGGG)n Simple_repeat Simple_repeat 1 301 0 2 1230 830 42 0 79 chr17 84634438 84634693 -10637958 + (CAGG)n Simple_repeat Simple_repeat 1 234 0 2 1230 519 206 84 0 chr17 84635656 84635763 -10636888 + PB1D9 SINE Alu 5 120 0 2 1230 571 274 51 0 chr17 84635815 84635972 -10636679 - B3A SINE B2 -2 196 32 2 1230 599 274 56 0 chr17 84636155 84636352 -10636299 + ID_B1 SINE B4 3 210 -14 2 1230 2660 136 14 14 chr17 84636871 84637290 -10635361 + MTC LTR MaLR 1 419 -2 2 1230 482 210 30 0 chr17 84637356 84637456 -10635195 - ID_B1 SINE B4 -34 190 88 2 1230 1097 107 95 6 chr17 84638108 84638287 -10634364 + B2_Mm2 SINE B2 1 195 0 2 1230 241 271 45 34 chr17 84638732 84638820 -10633831 + MLT1A1 LTR MaLR 320 408 0 2 1230 462 271 59 62 chr17 84638957 84639264 -10633387 + L1MEc LINE L1 1014 1319 -5081 2 1230 295 197 14 83 chr17 84639374 84639446 -10633205 + ID2 SINE ID 5 71 -12 2 1230 403 130 26 0 chr17 84639446 84639523 -10633128 + (CCAA)n Simple_repeat Simple_repeat 1 79 0 2 1230 264 235 73 0 chr17 84639548 84639616 -10633035 + L1MEc LINE L1 5205 5277 -1042 2 1230 306 0 0 0 chr17 84639617 84639651 -10633000 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 1230 4951 60 25 9 chr17 84639686 84640324 -10632327 + L1_Mus1 LINE L1 5920 6567 0 2 1230 479 254 84 8 chr17 84640349 84640468 -10632183 + B1F SINE Alu 22 149 0 2 1230 215 219 0 0 chr17 84640498 84640539 -10632112 + GA-rich Low_complexity Low_complexity 2 42 0 2 1230 1066 52 0 7 chr17 84640625 84640762 -10631889 + B1_Mm SINE Alu 4 139 -8 2 1230 791 180 49 12 chr17 84640782 84640945 -10631706 + B2_Mm2 SINE B2 27 195 0 2 1230 235 275 14 0 chr17 84640949 84641018 -10631633 + L1MC LINE L1 5166 5235 -911 2 1230 431 256 66 8 chr17 84641064 84641186 -10631465 + RSINE1 SINE B4 4 132 -33 2 1230 183 42 0 0 chr17 84641204 84641228 -10631423 + (TCTG)n Simple_repeat Simple_repeat 1 24 0 2 1230 347 258 72 0 chr17 84641427 84641524 -10631127 + L1MEc LINE L1 5662 5765 -587 2 1230 180 0 0 0 chr17 84641700 84641720 -10630931 + (TG)n Simple_repeat Simple_repeat 1 20 0 2 1230 804 139 16 0 chr17 84641727 84641856 -10630795 - B1_Mur4 SINE Alu -18 132 2 2 1230 377 271 79 62 chr17 84641907 84642084 -10630567 + L1MEc LINE L1 5818 5997 -340 2 1230 755 246 38 22 chr17 84642153 84642336 -10630315 + B3A SINE B2 2 187 -11 2 1230 701 276 160 42 chr17 84642343 84642894 -10629757 + L1MB5 LINE L1 5319 5934 -240 2 1230 308 75 78 0 chr17 84644690 84644741 -10627910 + ORR1A4 LTR MaLR 280 361 -13 2 1230 515 149 0 0 chr17 84644850 84644924 -10627727 + ID_B1 SINE B4 147 220 -4 2 1230 267 31 0 0 chr17 84645004 84645036 -10627615 + (GGGA)n Simple_repeat Simple_repeat 1 32 0 2 1230 232 206 76 45 chr17 84645683 84645749 -10626902 + B4 SINE B4 11 78 -214 2 1230 306 0 0 0 chr17 84645778 84645812 -10626839 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 1230 576 274 0 0 chr17 84646086 84646210 -10626441 + B1_Mur1 SINE Alu 21 144 -5 2 1230 651 280 18 37 chr17 84646222 84646385 -10626266 + RSINE1 SINE B4 6 165 0 2 1230 29 0 0 0 chr17 84646465 84646494 -10626157 + AT_rich Low_complexity Low_complexity 1 29 0 3 1230 386 274 0 95 chr17 84647284 84647389 -10625262 - RSINE1 SINE B4 -24 141 47 3 1230 189 266 47 0 chr17 84647420 84647484 -10625167 - MIRc SINE MIR -112 156 90 3 1230 251 93 23 0 chr17 84647504 84647547 -10625104 + (GGAA)n Simple_repeat Simple_repeat 2 45 0 3 1230 903 19 0 0 chr17 84647547 84647652 -10624999 + (GGGAGA)n Simple_repeat Simple_repeat 5 109 0 3 1230 256 310 53 23 chr17 84647845 84647977 -10624674 + YREP_Mm Unknown Unknown 159 294 -1518 3 1230 676 160 48 0 chr17 84647871 84647996 -10624655 - ID_B1 SINE B4 -10 214 84 3 1230 189 0 0 0 chr17 84648444 84648465 -10624186 + (CA)n Simple_repeat Simple_repeat 1 21 0 3 1230 477 0 0 0 chr17 84648465 84648517 -10624134 + (TC)n Simple_repeat Simple_repeat 1 53 0 3 1230 324 0 0 0 chr17 84648517 84648552 -10624099 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1230 574 288 20 0 chr17 84648741 84648887 -10623764 - B1F2 SINE Alu 0 149 1 3 1230 445 316 13 114 chr17 84648887 84648977 -10623674 - ID_B1 SINE B4 -1 223 12 3 1230 22 0 0 0 chr17 84649029 84649051 -10623600 + AT_rich Low_complexity Low_complexity 1 22 0 3 1230 1211 62 0 0 chr17 84649115 84649261 -10623390 - B1_Mus1 SINE Alu -2 146 1 3 1230 315 0 0 0 chr17 84649311 84649346 -10623305 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1230 649 269 14 0 chr17 84649355 84649496 -10623155 - RSINE1 SINE B4 -22 143 1 3 1230 267 197 182 0 chr17 84649513 84649579 -10623072 - PB1D10 SINE Alu -13 104 27 3 1230 367 302 0 25 chr17 84649575 84649694 -10622957 - MER33 DNA MER1_type -207 117 2 3 1230 546 172 50 10 chr17 84650438 84650538 -10622113 - ID_B1 SINE B4 0 224 121 3 1230 1150 69 7 0 chr17 84650564 84650709 -10621942 - B1_Mus2 SINE Alu 0 147 2 3 1230 278 250 0 0 chr17 84650709 84650761 -10621890 - B4A SINE B4 -153 139 88 3 1230 975 137 0 0 chr17 84651992 84652138 -10620513 - B2_Mm2 SINE B2 -49 146 1 3 1230 857 197 181 49 chr17 84652139 84652427 -10620224 - ORR1C2 LTR MaLR -58 326 1 3 1230 439 214 10 0 chr17 84653325 84653423 -10619228 - RSINE1 SINE B4 -65 100 2 3 1230 291 299 26 13 chr17 84653459 84653537 -10619114 - RSINE1 SINE B4 0 165 87 3 1230 658 232 116 2 chr17 84653652 84653824 -10618827 - B4A SINE B4 -74 218 18 3 1230 320 280 0 0 chr17 84654272 84654347 -10618304 - ID2 SINE ID -7 76 2 3 1230 387 0 0 0 chr17 84654641 84654684 -10617967 + (TTA)n Simple_repeat Simple_repeat 2 44 0 3 1230 665 221 8 15 chr17 84654684 84654806 -10617845 - ID_B1 SINE B4 -13 211 91 3 1230 351 258 22 30 chr17 84654789 84654904 -10617747 - PB1D7 SINE Alu -13 136 32 3 1230 218 253 259 47 chr17 84654821 84654991 -10617660 - ID_B1 SINE B4 -4 220 15 3 1230 369 250 0 57 chr17 84655905 84656011 -10616640 - L2c LINE L2 -4 3383 3284 3 1230 228 258 42 70 chr17 84656017 84656088 -10616563 + MER112 DNA MER1_type 2 70 -191 3 1230 849 166 0 21 chr17 84656452 84656594 -10616057 - B1_Mur4 SINE Alu -1 149 11 3 1230 415 216 9 56 chr17 84656598 84656706 -10615945 - B1F2 SINE Alu -29 120 18 3 1230 218 307 157 35 chr17 84659533 84659705 -10612946 - MIRb SINE MIR -35 233 41 3 1230 1027 112 6 12 chr17 84659945 84660116 -10612535 + (TTCC)n Simple_repeat Simple_repeat 3 172 0 3 1230 661 176 0 18 chr17 84660125 84660235 -10612416 - B1_Mur4 SINE Alu -33 117 10 3 1230 306 0 0 0 chr17 84661144 84661178 -10611473 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 3 1230 738 233 126 11 chr17 84662302 84662493 -10610158 - B3 SINE B2 0 216 4 3 1230 478 231 10 49 chr17 84662541 84662661 -10609990 - PB1D7 SINE Alu -29 118 5 3 1230 247 277 15 0 chr17 84665442 84665507 -10607144 + MER5B DNA MER1_type 86 151 -27 3 1230 218 183 270 70 chr17 84665688 84665788 -10606863 + PB1D7 SINE Alu 1 120 0 3 1230 551 221 9 17 chr17 84666434 84666549 -10606102 + PB1D9 SINE Alu 1 114 -6 3 1230 339 121 0 0 chr17 84666596 84666654 -10605997 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 1230 309 191 32 0 chr17 84667024 84667087 -10605564 + ID4 SINE ID 6 70 -13 3 1230 572 284 95 8 chr17 84667100 84667352 -10605299 - L1M3 LINE L1 -360 5823 5550 3 1230 270 350 17 17 chr17 84667658 84667777 -10604874 - PB1D7 SINE Alu -1 119 1 3 1230 23 0 0 0 chr17 84669445 84669468 -10603183 + AT_rich Low_complexity Low_complexity 1 23 0 3 1230 1171 35 28 0 chr17 84669634 84669777 -10602874 - B1_Mus1 SINE Alu 0 148 2 3 1230 701 151 53 38 chr17 84671241 84671372 -10601279 - B1_Mur4 SINE Alu -13 137 5 3 1230 435 176 0 0 chr17 84671577 84671668 -10600983 + A-rich Low_complexity Low_complexity 1 91 0 3 1231 635 221 45 8 chr17 84673360 84673492 -10599159 - ID_B1 SINE B4 -7 217 81 3 1231 187 273 50 38 chr17 84674674 84674754 -10597897 - MIRm SINE MIR -2 274 194 3 1231 449 251 160 16 chr17 84675416 84675610 -10597041 - Tigger7 DNA MER2_type 0 2491 2270 3 1231 577 203 148 0 chr17 84675647 84675775 -10596876 - B1_Mus2 SINE Alu 0 147 1 3 1231 240 35 0 0 chr17 84675887 84675916 -10596735 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1231 387 284 30 61 chr17 84675983 84676148 -10596503 + L1MC2 LINE L1 6168 6317 -27 3 1231 362 279 32 45 chr17 84677246 84677400 -10595251 + RSINE1 SINE B4 14 165 0 3 1231 387 0 0 0 chr17 84677408 84677451 -10595200 + (CAA)n Simple_repeat Simple_repeat 1 43 0 3 1231 273 29 0 0 chr17 84677454 84677488 -10595163 + (CAGG)n Simple_repeat Simple_repeat 2 35 0 3 1231 459 226 9 36 chr17 84679155 84679265 -10593386 + B3 SINE B2 110 216 0 3 1231 359 205 51 0 chr17 84679694 84679772 -10592879 + PB1D9 SINE Alu 34 115 -5 3 1231 332 344 16 24 chr17 84679785 84679910 -10592741 - MER119 DNA MER1_type -3 580 457 3 1231 367 305 175 11 chr17 84680002 84680191 -10592460 - MER119 DNA MER1_type -301 282 63 3 1231 776 43 267 0 chr17 84680573 84680689 -10591962 + B1_Mus1 SINE Alu 2 148 0 3 1231 609 187 146 0 chr17 84681152 84681275 -10591376 - B1_Mus1 SINE Alu 0 148 8 3 1231 365 291 102 0 chr17 84681390 84681517 -10591134 + ID_B1 SINE B4 84 223 -1 3 1231 510 125 0 0 chr17 84681685 84681765 -10590886 + (GA)n Simple_repeat Simple_repeat 1 80 0 3 1231 315 191 98 78 chr17 84681951 84682053 -10590598 - B1F2 SINE Alu -45 104 1 3 1231 301 221 32 81 chr17 84682053 84682064 -10590587 - ID_B1 SINE B4 -30 146 78 3 1231 315 227 124 0 chr17 84683471 84683568 -10589083 + PB1D10 SINE Alu 8 116 -1 3 1231 324 284 157 0 chr17 84684048 84684182 -10588469 + MER20 DNA MER1_type 37 191 -28 3 1231 906 156 0 0 chr17 84685049 84685520 -10587131 + (CA)n Simple_repeat Simple_repeat 1 471 0 3 1231 243 214 57 0 chr17 84685569 84685639 -10587012 + L1MB3 LINE L1 5962 6035 -148 3 1231 180 0 0 0 chr17 84686969 84686989 -10585662 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1231 777 31 0 0 chr17 84686990 84687087 -10585564 - U6 snRNA snRNA -10 97 1 3 1231 225 0 0 0 chr17 84688607 84688632 -10584019 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 3 1231 2282 149 38 34 chr17 84688747 84689164 -10583487 + MTC LTR MaLR 3 421 0 3 1231 510 198 105 77 chr17 84689185 84689366 -10583285 + B2_Mm2 SINE B2 1 186 -9 3 1231 1168 251 99 3 chr17 84690052 84690415 -10582236 + MTD LTR MaLR 10 407 -12 3 1231 283 264 19 151 chr17 84690430 84690517 -10582134 + L1M4 LINE L1 3943 4028 -2118 3 1231 1117 58 7 0 chr17 84690517 84690655 -10581996 + B1_Mus1 SINE Alu 4 142 -6 3 1231 333 228 57 43 chr17 84690655 84690772 -10581879 + L1M4 LINE L1 4026 4120 -2026 3 1231 344 274 24 2 chr17 84690765 84690862 -10581789 + L1M4 LINE L1 4047 4144 -2002 3 1231 412 281 36 99 chr17 84691350 84691682 -10580969 + LTR37B LTR ERV1 155 465 -3 3 1231 623 164 16 2 chr17 84691878 84692001 -10580650 - B3A SINE B2 -61 134 7 3 1231 1343 275 108 12 chr17 84693664 84694157 -10578494 + L1MC3 LINE L1 6454 6993 -792 3 1231 383 354 59 29 chr17 84694393 84694632 -10578019 - L1M5 LINE L1 -3005 3141 2896 3 1231 397 291 17 0 chr17 84695182 84695299 -10577352 - L1MC3 LINE L1 -10 7775 7657 3 1231 811 76 0 8 chr17 84695323 84695443 -10577208 - B2_Mm2 SINE B2 -1 194 76 3 1231 352 296 171 75 chr17 84695470 84695909 -10576742 - L1MC3 LINE L1 -318 7467 6987 3 1231 716 251 57 38 chr17 84696075 84696286 -10576365 - ID_B1 SINE B4 -6 218 4 3 1231 21 57 0 0 chr17 84696960 84696995 -10575656 + AT_rich Low_complexity Low_complexity 1 35 0 3 1231 1054 271 53 94 chr17 84697042 84697828 -10574823 + RMER19B LTR ERVK 1 900 -2 3 1231 1014 114 6 0 chr17 84698958 84699125 -10573526 + URR1A DNA MER1_type 59 226 0 3 1231 327 25 0 0 chr17 84700949 84700989 -10571662 + (TC)n Simple_repeat Simple_repeat 2 41 0 3 1231 1216 35 7 0 chr17 84700989 84701133 -10571518 - B1_Mus2 SINE Alu -2 145 1 3 1231 180 0 0 0 chr17 84701142 84701162 -10571489 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1231 211 374 18 53 chr17 84701445 84701558 -10571093 + MIRm SINE MIR 165 273 -3 3 1231 673 174 297 17 chr17 84702135 84702310 -10570341 - ID_B1 SINE B4 0 224 1 3 1231 345 24 0 0 chr17 84702519 84702561 -10570090 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1231 424 167 0 26 chr17 84707013 84707130 -10565521 + GA-rich Low_complexity Low_complexity 3 116 0 3 1231 257 287 23 0 chr17 84707288 84707375 -10565276 + B4A SINE B4 7 95 -197 3 1231 182 250 0 0 chr17 84708176 84708220 -10564431 + L2c LINE L2 3343 3386 -1 4 1231 738 207 313 11 chr17 84708664 84708942 -10563709 - ORR1D1 LTR MaLR -12 362 1 4 1231 489 88 0 0 chr17 84710739 84710819 -10561832 + (TC)n Simple_repeat Simple_repeat 2 81 0 4 1231 360 0 0 0 chr17 84710819 84710859 -10561792 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1231 264 261 135 11 chr17 84711563 84711652 -10560999 + B1_Mur3 SINE Alu 8 107 -42 4 1231 21 0 0 0 chr17 84711757 84711778 -10560873 + AT_rich Low_complexity Low_complexity 1 21 0 4 1231 21 36 0 0 chr17 84711800 84711828 -10560823 + AT_rich Low_complexity Low_complexity 1 28 0 4 1231 1059 114 0 0 chr17 84712024 84712164 -10560487 + B1_Mur4 SINE Alu 2 141 -9 4 1231 342 0 0 0 chr17 84712164 84712202 -10560449 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 4 1231 340 202 0 82 chr17 84714181 84714375 -10558276 + (CAGTG)n Simple_repeat Simple_repeat 1 178 0 4 1231 290 217 0 28 chr17 84715306 84715377 -10557274 + Lx3B LINE L1 6904 6972 -1 4 1231 557 28 0 14 chr17 84715381 84715433 -10557218 + (GAAAA)n Simple_repeat Simple_repeat 3 54 0 4 1231 336 48 0 0 chr17 84715433 84715475 -10557176 + (GGGA)n Simple_repeat Simple_repeat 3 44 0 4 1231 557 28 0 14 chr17 84715475 84715494 -10557157 + (GAAAA)n Simple_repeat Simple_repeat 5 23 0 4 1231 23 0 0 0 chr17 84715624 84715647 -10557004 + AT_rich Low_complexity Low_complexity 1 23 0 4 1231 26 0 0 27 chr17 84715797 84715815 -10556836 + AT_rich Low_complexity Low_complexity 1 18 0 4 1231 1639 32 0 0 chr17 84715815 84716003 -10556648 - B2_Mm1a SINE B2 -4 189 2 4 1231 26 0 0 27 chr17 84716003 84716021 -10556630 + AT_rich Low_complexity Low_complexity 1 18 0 4 1231 254 225 14 14 chr17 84716029 84716101 -10556550 + MMAR1 DNA Mariner 1 72 -1214 4 1231 2903 234 166 32 chr17 84716177 84717252 -10555399 + MMAR1 DNA Mariner 62 1281 -5 4 1231 1137 55 0 27 chr17 84717363 84717500 -10555151 + B1_Mus2 SINE Alu 1 137 -10 4 1231 212 0 0 35 chr17 84717500 84717529 -10555122 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1231 1137 55 0 27 chr17 84717529 84717541 -10555110 + B1_Mus2 SINE Alu 138 146 -1 4 1231 343 171 128 33 chr17 84718396 84718545 -10554106 + L1M LINE L1 5267 5425 -754 4 1231 405 200 122 0 chr17 84718702 84718792 -10553859 - B1_Mus2 SINE Alu -45 102 2 4 1231 540 174 104 0 chr17 84720358 84720473 -10552178 - B1_Mur1 SINE Alu -18 131 5 4 1231 207 312 162 0 chr17 84721923 84722083 -10550568 + MIR SINE MIR 31 216 -46 4 1231 303 96 0 0 chr17 84722619 84722671 -10549980 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 4 1231 693 338 89 18 chr17 84723381 84723764 -10548887 + Tigger7 DNA MER2_type 29 438 -2053 4 1231 307 288 63 0 chr17 84723857 84723968 -10548683 + Tigger7 DNA MER2_type 2374 2491 0 4 1231 308 317 0 24 chr17 84723995 84724121 -10548530 + G-rich Low_complexity Low_complexity 6 128 0 4 1231 387 58 0 0 chr17 84726466 84726484 -10546167 + (A)n Simple_repeat Simple_repeat 1 18 0 4 1231 944 31 156 8 chr17 84726484 84726612 -10546039 + B1_Mus2 SINE Alu 1 147 0 4 1231 387 58 0 0 chr17 84726612 84726645 -10546006 + (A)n Simple_repeat Simple_repeat 1 33 0 4 1231 1163 62 7 0 chr17 84727449 84727595 -10545056 + B1_Mus1 SINE Alu 2 148 0 4 1231 470 318 0 23 chr17 84727635 84727767 -10544884 - RSINE1 SINE B4 -35 130 2 4 1231 279 224 154 39 chr17 84728498 84728628 -10544023 + L1MA5 LINE L1 6143 6287 -13 4 1231 722 171 0 65 chr17 84728640 84728778 -10543873 - B1_Mur2 SINE Alu -12 137 9 4 1231 517 293 18 24 chr17 84729787 84729955 -10542696 + ID_B1 SINE B4 49 215 -9 4 1231 780 273 54 0 chr17 84731111 84731316 -10541335 - B3 SINE B2 0 216 1 4 1231 434 182 26 0 chr17 84731338 84731415 -10541236 + ID4 SINE ID 2 80 -3 4 1231 1047 77 211 0 chr17 84733572 84733728 -10538923 - B2_Mm2 SINE B2 -6 189 1 4 1231 307 268 0 24 chr17 84734415 84734499 -10538152 - B4 SINE B4 0 292 211 4 1231 240 220 167 52 chr17 84734519 84734615 -10538036 - RSINE1 SINE B4 -12 153 47 4 1231 613 307 11 22 chr17 84734636 84734819 -10537832 - B4 SINE B4 -64 228 48 4 1231 454 202 125 0 chr17 84734875 84734979 -10537672 - B1_Mus2 SINE Alu -12 135 19 4 1231 305 270 0 149 chr17 84734984 84735132 -10537519 - B3A SINE B2 -5 211 86 4 1231 298 341 0 0 chr17 84735390 84735478 -10537173 - RMER15 LTR ERVL -112 463 376 4 1231 180 0 0 0 chr17 84735554 84735574 -10537077 + (TCTCTG)n Simple_repeat Simple_repeat 4 23 0 4 1231 399 325 24 0 chr17 84735574 84735700 -10536951 - RSINE1 SINE B4 -35 130 2 4 1231 701 219 67 51 chr17 84735766 84735944 -10536707 - B3 SINE B2 -30 186 6 4 1231 285 263 160 10 chr17 84735965 84736065 -10536586 - PB1D10 SINE Alu -1 116 2 4 1231 379 318 37 19 chr17 84736520 84736735 -10535916 - MER20 DNA MER1_type 0 219 1 4 1231 594 124 0 0 chr17 84737076 84737197 -10535454 + (TC)n Simple_repeat Simple_repeat 2 122 0 4 1231 459 0 0 0 chr17 84737197 84737248 -10535403 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 1231 603 330 49 25 chr17 84737273 84737660 -10534991 - L1ME2 LINE L1 -141 6032 5631 4 1231 315 0 0 0 chr17 84738092 84738127 -10534524 + (TTTTG)n Simple_repeat Simple_repeat 3 37 0 4 1231 420 20 0 0 chr17 84738232 84738281 -10534370 + (TCCC)n Simple_repeat Simple_repeat 4 52 0 4 1231 357 238 12 0 chr17 84738284 84738368 -10534283 - RSINE1 SINE B4 -69 96 12 4 1231 2185 143 23 65 chr17 84738962 84739198 -10533453 - MTC LTR MaLR 0 421 212 4 1231 904 90 97 0 chr17 84739198 84739332 -10533319 - B1_Mus1 SINE Alu 0 148 2 4 1231 2185 143 23 65 chr17 84739332 84739529 -10533122 - MTC LTR MaLR -210 211 6 4 1231 1557 62 0 5 chr17 84739786 84739981 -10532670 + B2_Mm2 SINE B2 1 194 -1 4 1231 784 167 232 17 chr17 84740304 84740481 -10532170 + B3 SINE B2 1 215 -1 4 1231 478 312 92 20 chr17 84741264 84741460 -10531191 + HERVL40-int LTR ERVL 5295 5504 -26 4 1231 882 266 9 0 chr17 84741476 84741690 -10530961 + ID_B1 SINE B4 2 217 -7 4 1231 305 267 35 118 chr17 84741813 84741983 -10530668 + LTR40b LTR ERVL 89 244 -218 4 1231 373 246 35 54 chr17 84742113 84742251 -10530400 + B1F SINE Alu 10 148 -1 4 1231 1466 73 0 20 chr17 84742670 84742866 -10529785 - B2_Mm2 SINE B2 0 195 4 4 1231 21 57 0 0 chr17 84743051 84743086 -10529565 + AT_rich Low_complexity Low_complexity 1 35 0 4 1231 1070 90 28 0 chr17 84743146 84743290 -10529361 + B1_Mus1 SINE Alu 1 148 0 4 1231 805 154 29 0 chr17 84743593 84743729 -10528922 - B1_Mur4 SINE Alu -10 140 1 4 1231 4309 110 10 0 chr17 84743753 84744371 -10528280 - L1_Mus2 LINE L1 -354 5529 4906 4 1231 7357 72 31 2 chr17 84744377 84745396 -10527255 + L1_Mus2 LINE L1 5510 6556 -10 4 1231 297 0 0 0 chr17 84745396 84745429 -10527222 + (TAA)n Simple_repeat Simple_repeat 1 33 0 4 1231 3575 154 157 29 chr17 84745529 84746318 -10526333 + RMER19B LTR ERVK 1 890 -12 4 1231 1509 179 204 14 chr17 84746823 84747175 -10525476 + MTD LTR MaLR 1 419 0 4 1231 325 338 39 19 chr17 84747320 84747474 -10525177 + RSINE1 SINE B4 3 159 -6 4 1231 250 280 26 39 chr17 84747691 84747769 -10524882 + ID4 SINE ID 2 78 -5 4 1231 305 200 25 0 chr17 84748174 84748254 -10524397 + GA-rich Low_complexity Low_complexity 2 83 0 4 1231 263 253 89 0 chr17 84748894 84748973 -10523678 + B3 SINE B2 23 108 -108 4 1231 228 240 51 39 chr17 84749064 84749142 -10523509 - 7SLRNA srpRNA srpRNA -180 134 56 4 1231 337 298 37 28 chr17 84749072 84749179 -10523472 + B3A SINE B2 55 162 -36 4 1231 302 284 70 60 chr17 84749185 84749398 -10523253 + RSINE1 SINE B4 10 227 -65 4 1231 1248 34 0 0 chr17 84749398 84749545 -10523106 + B1_Mus2 SINE Alu 1 147 0 4 1231 1033 88 12 25 chr17 84749687 84749850 -10522801 + B2_Mm1t SINE B2 24 184 -9 4 1231 845 87 158 8 chr17 84749919 84750046 -10522605 + B1_Mus1 SINE Alu 2 147 -1 4 1231 749 68 8 0 chr17 84750166 84750283 -10522368 + (CA)n Simple_repeat Simple_repeat 1 118 0 4 1231 281 277 0 50 chr17 84750865 84750964 -10521687 + ID_B1 SINE B4 78 171 -53 4 1231 528 16 0 0 chr17 84750990 84751051 -10521600 + (GA)n Simple_repeat Simple_repeat 2 62 0 4 1231 222 62 0 0 chr17 84751055 84751087 -10521564 + (GGAA)n Simple_repeat Simple_repeat 4 35 0 4 1231 570 272 6 58 chr17 84751549 84751721 -10520930 + RSINE1 SINE B4 3 165 0 4 1231 297 0 0 0 chr17 84751721 84751754 -10520897 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 1231 333 0 0 0 chr17 84751800 84751837 -10520814 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 1231 180 0 0 0 chr17 84751839 84751859 -10520792 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1231 427 284 73 45 chr17 84752149 84752326 -10520325 + MLT1H2 LTR MaLR 305 486 -3 4 1231 281 326 142 47 chr17 84752400 84752548 -10520103 - MLT1C LTR MaLR -78 389 228 4 1231 414 0 0 0 chr17 84752712 84752758 -10519893 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1231 1153 281 163 24 chr17 84752767 84753701 -10518950 + L1M4c LINE L1 583 1646 -4738 4 1231 535 118 0 0 chr17 84753701 84753786 -10518865 + B2_Mm2 SINE B2 111 195 0 4 1231 194 0 39 0 chr17 84753929 84753955 -10518696 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 4 1231 1208 254 89 34 chr17 84754003 84754386 -10518265 + RMER1A Other Other 92 495 -535 4 1231 1413 207 98 17 chr17 84754386 84754800 -10517851 + RMER16 LTR ERVK 1 533 0 4 1231 403 209 0 0 chr17 84754805 84754891 -10517760 + RMER1B Other Other 970 1055 -11 4 1231 373 163 84 0 chr17 84755168 84755250 -10517401 - B1F2 SINE Alu -5 115 28 4 1231 270 287 93 0 chr17 84755261 84755369 -10517282 + ID_B1 SINE B4 58 175 -49 4 1231 257 265 34 57 chr17 84755304 84755392 -10517259 + PB1D10 SINE Alu 29 114 -3 4 1231 258 189 0 19 chr17 84755432 84755486 -10517165 + Lx9 LINE L1 7312 7364 -280 4 1231 185 65 0 31 chr17 84755812 84755844 -10516807 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 5 1231 23 33 0 0 chr17 84756972 84757002 -10515649 + AT_rich Low_complexity Low_complexity 1 30 0 5 1231 702 274 26 16 chr17 84757121 84757310 -10515341 - B3 SINE B2 -24 192 2 5 1231 336 229 60 12 chr17 84757730 84757814 -10514837 + PB1D10 SINE Alu 7 94 -55 5 1231 1368 69 40 0 chr17 84758689 84758863 -10513788 + B2_Mm2 SINE B2 1 181 -14 5 1231 231 36 0 0 chr17 84758864 84758892 -10513759 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 5 1231 453 36 0 0 chr17 84759780 84759835 -10512816 + (CATA)n Simple_repeat Simple_repeat 2 56 0 5 1231 214 205 17 8 chr17 84759840 84759958 -10512693 + (CAGA)n Simple_repeat Simple_repeat 4 122 0 5 1231 1191 35 7 0 chr17 84760254 84760399 -10512252 + B1_Mus2 SINE Alu 1 146 -1 5 1231 246 378 60 13 chr17 84760525 84760675 -10511976 + MIRc SINE MIR 62 218 -50 5 1231 918 113 0 0 chr17 84760701 84760843 -10511808 + (CA)n Simple_repeat Simple_repeat 1 142 0 5 1231 240 169 62 0 chr17 84761596 84761661 -10510990 + PB1D10 SINE Alu 48 116 -1 5 1231 21 0 0 0 chr17 84762277 84762298 -10510353 + AT_rich Low_complexity Low_complexity 1 21 0 5 1231 195 129 0 0 chr17 84762719 84762750 -10509901 + (AGGGGG)n Simple_repeat Simple_repeat 1 31 0 5 1231 315 148 303 2 chr17 84763278 84763367 -10509284 + B1_Mus2 SINE Alu 2 114 -6 5 1231 275 331 70 38 chr17 84763417 84763574 -10509077 - RSINE1 SINE B4 0 165 4 5 1231 210 37 0 0 chr17 84766145 84766172 -10506479 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1231 1193 36 0 0 chr17 84766172 84766310 -10506341 - B1_Mm SINE Alu -9 138 1 5 1231 22 0 0 0 chr17 84766659 84766681 -10505970 + AT_rich Low_complexity Low_complexity 1 22 0 5 1231 278 259 99 21 chr17 84767995 84768137 -10504514 + L2 LINE L2 2313 2465 -954 5 1231 422 261 155 6 chr17 84768139 84768320 -10504331 + ID_B1 SINE B4 1 208 -16 5 1231 290 296 11 0 chr17 84768326 84768414 -10504237 + GA-rich Low_complexity Low_complexity 2 90 0 5 1231 575 238 138 16 chr17 84768629 84768817 -10503834 - B3 SINE B2 -4 212 2 5 1231 337 289 115 11 chr17 84771281 84771463 -10501188 + ID_B1 SINE B4 16 216 -8 5 1231 227 133 22 0 chr17 84771575 84771620 -10501031 + A-rich Low_complexity Low_complexity 5 50 0 5 1231 610 301 25 15 chr17 84771669 84771871 -10500780 - Lx7 LINE L1 -395 7301 7098 5 1231 413 281 145 42 chr17 84772539 84772822 -10499829 + L1M5 LINE L1 5356 5667 -457 5 1231 443 258 15 15 chr17 84773199 84773333 -10499318 + ID_B1 SINE B4 87 220 -4 5 1231 251 300 0 0 chr17 84773678 84773748 -10498903 + ID2 SINE ID 2 71 -12 5 1231 489 34 0 0 chr17 84774498 84774557 -10498094 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 1231 28 0 0 0 chr17 84774557 84774585 -10498066 + AT_rich Low_complexity Low_complexity 1 28 0 5 1231 1120 49 21 0 chr17 84774586 84774729 -10497922 - B1_Mm SINE Alu 0 147 2 5 1231 713 212 125 16 chr17 84774761 84775077 -10497574 + MTE2b LTR MaLR 11 405 -14 5 1231 210 108 0 51 chr17 84775209 84775248 -10497403 + T-rich Low_complexity Low_complexity 6 42 0 5 1231 1454 212 87 9 chr17 84776356 84776703 -10495948 - ORR1D1 LTR MaLR 0 374 1 5 1231 22 35 0 0 chr17 84777275 84777304 -10495347 + AT_rich Low_complexity Low_complexity 1 29 0 5 1231 908 184 7 0 chr17 84777389 84777536 -10495115 - B1_Mur2 SINE Alu 0 149 2 5 1231 22 35 0 0 chr17 84778731 84778760 -10493891 + AT_rich Low_complexity Low_complexity 1 29 0 5 1231 376 302 44 63 chr17 84779805 84779964 -10492687 - RSINE1 SINE B4 -2 163 8 5 1231 1312 118 0 26 chr17 84780045 84780236 -10492415 + B2_Mm2 SINE B2 2 187 -8 5 1231 609 157 360 0 chr17 84780251 84780404 -10492247 - B3 SINE B2 -7 209 2 5 1231 522 327 33 0 chr17 84780420 84780573 -10492078 - ID_B1 SINE B4 -63 161 4 5 1231 200 361 12 0 chr17 84780576 84780659 -10491992 + L2c LINE L2 3303 3386 -1 5 1231 296 318 50 33 chr17 84781853 84781899 -10490752 + L1MD LINE L1 5589 5633 -609 5 1231 1049 208 18 45 chr17 84781899 84782121 -10490530 + B3 SINE B2 1 216 0 5 1231 351 286 50 33 chr17 84782121 84782256 -10490395 + L1MD LINE L1 5634 5773 -469 5 1231 215 277 73 73 chr17 84782523 84782632 -10490019 - MIRm SINE MIR -121 155 47 5 1231 540 308 0 0 chr17 84783744 84783887 -10488764 - ID_B1 SINE B4 -1 223 81 5 1231 569 258 154 46 chr17 84784099 84784274 -10488377 + B3A SINE B2 2 195 -3 5 1231 281 284 37 0 chr17 84784463 84784544 -10488107 - B1F SINE Alu -52 97 14 5 1231 1657 47 0 10 chr17 84784613 84784808 -10487843 + B2_Mm2 SINE B2 3 195 0 5 1231 899 189 14 0 chr17 84784909 84785057 -10487594 + B1_Mur4 SINE Alu 1 150 0 5 1231 22 0 0 0 chr17 84786417 84786439 -10486212 + AT_rich Low_complexity Low_complexity 1 22 0 5 1231 554 168 79 107 chr17 84786447 84786587 -10486064 - B1_Mur4 SINE Alu -13 137 2 5 1231 321 292 0 43 chr17 84786630 84786723 -10485928 + PB1D10 SINE Alu 1 89 -28 5 1231 791 225 104 10 chr17 84788450 84788643 -10484008 + B3 SINE B2 6 216 0 5 1231 442 287 25 50 chr17 84788955 84789076 -10483575 + RSINE1 SINE B4 3 120 -45 5 1231 777 274 51 31 chr17 84789433 84789689 -10482962 - MER102b DNA MER1_type -80 261 1 5 1231 305 261 179 21 chr17 84789962 84790107 -10482544 - L1M4 LINE L1 -744 5434 5267 5 1231 330 246 0 0 chr17 84790108 84790165 -10482486 - ID4_ SINE ID -23 60 4 5 1231 1038 249 51 8 chr17 84790331 84790590 -10482061 - ORR1E LTR MaLR -55 324 23 5 1231 269 322 25 8 chr17 84790627 84790746 -10481905 + Lx9 LINE L1 6463 6583 -1061 5 1231 1055 0 0 0 chr17 84790768 84790875 -10481776 + U6 snRNA snRNA 1 107 0 5 1231 317 0 0 0 chr17 84790875 84790919 -10481732 + L1Md_T LINE L1 6539 6582 0 5 1231 235 178 0 0 chr17 84790963 84791008 -10481643 + L1MB1 LINE L1 5395 5439 -744 5 1231 797 241 36 20 chr17 84791008 84791203 -10481448 + B3 SINE B2 7 204 -12 5 1231 464 144 67 0 chr17 84791678 84791782 -10480869 + Lx2 LINE L1 6834 6944 -53 5 1231 630 39 0 0 chr17 84791788 84791865 -10480786 + (GA)n Simple_repeat Simple_repeat 2 78 0 5 1231 427 241 103 52 chr17 84791930 84792196 -10480455 + L1MB1 LINE L1 5657 5955 -234 5 1231 228 176 19 38 chr17 84792315 84792368 -10480283 + L1MB1 LINE L1 6098 6149 -34 5 1231 279 342 31 27 chr17 84792960 84793185 -10479466 + L1M5 LINE L1 2594 2819 -3327 5 1231 673 236 40 53 chr17 84793225 84793377 -10479274 - B1_Mur4 SINE Alu 0 150 1 5 1231 756 250 74 54 chr17 84793410 84793613 -10479038 + B3 SINE B2 4 210 -6 5 1231 21 0 0 0 chr17 84793989 84794010 -10478641 + AT_rich Low_complexity Low_complexity 1 21 0 5 1231 1273 212 63 50 chr17 84795130 84795492 -10477159 + L1MB8 LINE L1 5809 6175 -3 5 1231 301 230 169 9 chr17 84796553 84796691 -10475960 + MIR SINE MIR 41 201 -67 5 1231 913 164 14 7 chr17 84796749 84796889 -10475762 + B1_Mur4 SINE Alu 2 143 -7 5 1231 186 43 0 0 chr17 84796889 84796912 -10475739 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 5 1231 537 349 20 7 chr17 84797227 84797380 -10475271 + RSINE1 SINE B4 11 165 0 5 1231 418 312 80 15 chr17 84797917 84798125 -10474526 + MTEa LTR MaLR 157 378 -1 5 1231 1287 48 0 0 chr17 84798561 84798708 -10473943 + B1_Mus1 SINE Alu 2 148 0 5 1231 441 0 0 0 chr17 84798712 84798761 -10473890 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1231 254 284 15 0 chr17 84799901 84799968 -10472683 - ID2 SINE ID -13 70 3 5 1231 409 277 137 50 chr17 84800011 84800193 -10472458 + B3A SINE B2 1 198 0 5 1231 354 23 0 0 chr17 84800423 84800466 -10472185 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1231 191 345 35 0 chr17 84801862 84801949 -10470702 + MIR SINE MIR 14 103 -159 5 1231 568 281 31 104 chr17 84802683 84802905 -10469746 + ID_B1 SINE B4 2 207 -17 5 1231 3536 75 0 60 chr17 84803057 84803076 -10469575 - Lx3_Mus LINE L1 0 7009 6992 5 1231 366 23 0 0 chr17 84803076 84803119 -10469532 + (TATG)n Simple_repeat Simple_repeat 2 44 0 5 153 3536 75 0 60 chr17 84803119 84803613 -10469038 - Lx3_Mus LINE L1 -18 6991 6528 5 1232 312 250 35 12 chr17 84803764 84803849 -10468802 + RSINE1 SINE B4 71 157 -8 5 1232 342 312 165 37 chr17 84803980 84804253 -10468398 + L2 LINE L2 2517 2824 -595 5 1232 455 258 0 0 chr17 84804265 84804354 -10468297 + PB1D10 SINE Alu 24 112 -5 5 1232 257 0 30 0 chr17 84804741 84804774 -10467877 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 5 1232 3709 55 0 2 chr17 84805510 84805943 -10466708 + L1_Mus1 LINE L1 6135 6566 -1 5 1232 555 237 59 0 chr17 84806606 84806741 -10465910 + ID_B1 SINE B4 81 223 -1 5 1232 260 258 240 8 chr17 84806744 84806869 -10465782 + RSINE1 SINE B4 4 157 -8 5 1232 380 247 107 137 chr17 84807008 84807205 -10465446 + B4 SINE B4 101 291 -1 5 1232 663 168 75 15 chr17 84807462 84807595 -10465056 + B1F2 SINE Alu 6 146 -3 5 1232 191 288 16 48 chr17 84807795 84807857 -10464794 + L2b LINE L2 3316 3375 0 5 1232 225 302 166 41 chr17 84808576 84808721 -10463930 + RSINE1 SINE B4 1 163 -2 5 1232 705 257 60 11 chr17 84810198 84810383 -10462268 + B3 SINE B2 2 195 -21 5 1232 486 244 30 22 chr17 84810516 84810650 -10462001 + B1_Mur1 SINE Alu 5 139 -10 5 1232 338 231 247 21 chr17 84811480 84811573 -10461078 - PB1D10 SINE Alu -2 115 2 5 1232 27 29 0 0 chr17 84811683 84811717 -10460934 + AT_rich Low_complexity Low_complexity 1 34 0 6 1232 827 153 60 30 chr17 84812601 84812769 -10459882 - B2_Mm2 SINE B2 -8 187 15 6 1232 275 313 39 158 chr17 84812904 84813158 -10459493 + MLT1G3 LTR MaLR 2 225 -370 6 1232 2827 113 23 5 chr17 84813803 84814194 -10458457 + MTB LTR MaLR 1 398 -2 6 1232 1540 66 89 0 chr17 84814194 84814407 -10458244 - MTA_Mm LTR MaLR -46 350 119 6 1232 238 250 0 20 chr17 84814408 84814457 -10458194 - B3 SINE B2 -11 205 158 6 1232 759 91 0 0 chr17 84814450 84814549 -10458102 - B2_Mm2 SINE B2 -95 100 2 6 1232 613 264 39 33 chr17 84814587 84814767 -10457884 + B3A SINE B2 2 182 -16 6 1232 439 280 131 13 chr17 84815847 84815995 -10456656 - ID_B1 SINE B4 -46 246 85 6 1232 236 178 55 11 chr17 84816023 84816114 -10456537 + (TTATA)n Simple_repeat Simple_repeat 4 98 0 6 1232 498 289 46 0 chr17 84816252 84816404 -10456247 - L1MB4 LINE L1 -4 6176 6018 6 1232 188 235 212 0 chr17 84816874 84816959 -10455692 + MIR SINE MIR 117 219 -43 6 1232 452 212 121 0 chr17 84817601 84817700 -10454951 - RSINE1 SINE B4 0 165 55 6 1232 183 42 0 0 chr17 84817825 84817849 -10454802 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6 1232 1146 96 0 27 chr17 84817873 84818023 -10454628 + B1_Mus1 SINE Alu 3 148 0 6 1232 21 0 0 0 chr17 84818034 84818055 -10454596 + AT_rich Low_complexity Low_complexity 1 21 0 6 1232 737 206 22 7 chr17 84818055 84818192 -10454459 - B1F SINE Alu -10 139 1 6 1232 228 150 0 0 chr17 84820441 84820481 -10452170 + PB1D10 SINE Alu 70 109 -8 6 1232 826 236 16 11 chr17 84820492 84820680 -10451971 + B3 SINE B2 7 195 -21 6 1232 24 32 0 0 chr17 84820697 84820728 -10451923 + AT_rich Low_complexity Low_complexity 1 31 0 6 1232 184 265 43 29 chr17 84821702 84821772 -10450879 + L3b LINE CR1 318 388 -94 6 1232 403 252 17 42 chr17 84822927 84823047 -10449604 - PB1D10 SINE Alu 0 117 1 6 1232 387 0 0 0 chr17 84823123 84823166 -10449485 + (TTCC)n Simple_repeat Simple_repeat 4 46 0 6 1232 813 258 51 0 chr17 84823187 84823365 -10449286 - B3 SINE B2 -29 187 1 6 1232 21 36 0 0 chr17 84823400 84823428 -10449223 + AT_rich Low_complexity Low_complexity 1 28 0 6 1232 1247 212 70 137 chr17 84823902 84824384 -10448267 + RMER4B LTR ERVK 17 466 0 6 1232 540 271 73 79 chr17 84824734 84824754 -10447897 + B3A SINE B2 1 13 -185 6 1232 2900 50 24 3 chr17 84824754 84825093 -10447558 + ORR1A1 LTR MaLR 1 346 0 6 1232 540 272 78 89 chr17 84825093 84825270 -10447381 + B3A SINE B2 14 191 -4 6 1232 330 206 0 0 chr17 84825372 84825445 -10447206 + (CA)n Simple_repeat Simple_repeat 1 73 0 6 1232 224 235 162 10 chr17 84826135 84826234 -10446417 + L2a LINE L2 3310 3423 -3 6 1232 219 167 0 0 chr17 84826630 84826672 -10445979 + A-rich Low_complexity Low_complexity 1 42 0 6 1232 28 0 0 0 chr17 84826722 84826750 -10445901 + AT_rich Low_complexity Low_complexity 1 28 0 6 1232 292 191 0 42 chr17 84826750 84826821 -10445830 - Lx7 LINE L1 -15 7681 7614 6 1232 276 53 0 0 chr17 84828651 84828689 -10443962 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1232 560 287 222 8 chr17 84828700 84828939 -10443712 - B4A SINE B4 0 292 3 6 1232 655 269 47 0 chr17 84829210 84829359 -10443292 + RSINE1 SINE B4 9 164 -1 6 1232 222 37 0 0 chr17 84829487 84829514 -10443137 + (CAG)n Simple_repeat Simple_repeat 1 27 0 6 1232 244 359 93 8 chr17 84829601 84829730 -10442921 + ID_B1 SINE B4 85 224 0 6 1232 326 216 149 12 chr17 84829779 84829997 -10442654 - L1MB8 LINE L1 -238 5940 5653 6 1232 867 245 5 26 chr17 84830193 84830382 -10442269 + ID_B1 SINE B4 31 215 -9 6 1232 369 265 171 57 chr17 84830424 84830600 -10442051 + B4 SINE B4 37 232 -60 6 1232 475 272 112 12 chr17 84830671 84830831 -10441820 + B4A SINE B4 116 291 -1 6 1232 23 0 0 0 chr17 84830872 84830895 -10441756 + AT_rich Low_complexity Low_complexity 1 23 0 6 1232 961 123 26 52 chr17 84831102 84831256 -10441395 + B1_Mur4 SINE Alu 1 150 0 6 1232 567 0 0 0 chr17 84831256 84831319 -10441332 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 1232 195 42 0 0 chr17 84831319 84831343 -10441308 + (GA)n Simple_repeat Simple_repeat 2 25 0 6 1232 1191 61 0 20 chr17 84832583 84832733 -10439918 - B1_Mus2 SINE Alu 0 147 1 6 1232 1412 81 16 0 chr17 84833037 84833222 -10439429 + B2_Mm2 SINE B2 1 188 -7 6 1232 26 0 0 0 chr17 84833389 84833415 -10439236 + AT_rich Low_complexity Low_complexity 1 26 0 6 1232 504 358 7 0 chr17 84833441 84833589 -10439062 - RSINE1 SINE B4 -14 151 3 6 1232 688 281 41 0 chr17 84836943 84837139 -10435512 + ID_B1 SINE B4 4 207 -17 6 1232 468 301 30 0 chr17 84837706 84837839 -10434812 - ID_B1 SINE B4 -14 210 74 6 1232 404 259 65 0 chr17 84837977 84838085 -10434566 + PB1D7 SINE Alu 6 120 0 6 1232 198 136 0 0 chr17 84838273 84838317 -10434334 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1232 237 294 44 0 chr17 84838476 84838544 -10434107 - RSINE1 SINE B4 -80 85 15 6 1232 859 253 63 0 chr17 84838726 84838947 -10433704 + B4A SINE B4 48 282 -10 6 1232 207 0 0 0 chr17 84838952 84838975 -10433676 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 1232 515 338 7 0 chr17 84839861 84840009 -10432642 + RSINE1 SINE B4 2 150 -15 6 1232 25 51 0 0 chr17 84840017 84840056 -10432595 + AT_rich Low_complexity Low_complexity 1 39 0 6 1232 1102 82 14 0 chr17 84841546 84841692 -10430959 + B1_Mus1 SINE Alu 1 148 0 6 1232 321 118 0 0 chr17 84842045 84842096 -10430555 + (TCCA)n Simple_repeat Simple_repeat 3 53 0 6 1232 496 291 31 0 chr17 84842099 84842226 -10430425 - B1F2 SINE Alu -17 132 2 6 1232 24 0 0 0 chr17 84842402 84842426 -10430225 + AT_rich Low_complexity Low_complexity 1 24 0 6 1232 707 258 60 5 chr17 84842486 84842685 -10429966 + B3 SINE B2 1 210 -6 6 1232 1462 68 16 10 chr17 84842696 84842889 -10429762 - B2_Mm2 SINE B2 0 195 2 6 1232 360 115 37 37 chr17 84843916 84843997 -10428654 - L1Md_A LINE L1 -2 6580 6500 6 1232 558 343 101 11 chr17 84844216 84844484 -10428167 - B4A SINE B4 0 292 1 6 1232 253 264 83 0 chr17 84844582 84844654 -10427997 - PB1D9 SINE Alu -8 112 35 6 1232 407 287 9 9 chr17 84844676 84844792 -10427859 + L1MB8 LINE L1 6045 6160 -18 6 1232 669 236 97 0 chr17 84844910 84845054 -10427597 - RSINE1 SINE B4 -6 159 2 6 1232 565 282 20 55 chr17 84845278 84845477 -10427174 + B3A SINE B2 6 197 -1 6 1232 283 271 141 0 chr17 84845491 84845576 -10427075 + ID_B1 SINE B4 76 172 -52 6 1232 1247 41 0 0 chr17 84846432 84846579 -10426072 + B1_Mus2 SINE Alu 1 147 0 6 1232 507 325 32 0 chr17 84846981 84847109 -10425542 + RSINE1 SINE B4 3 135 -30 6 1232 264 77 0 0 chr17 84847109 84847148 -10425503 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1232 507 325 32 0 chr17 84847148 84847176 -10425475 + RSINE1 SINE B4 136 163 -2 6 1232 362 360 48 19 chr17 84847425 84847632 -10425019 + MIRb SINE MIR 14 226 -42 6 1232 894 211 38 19 chr17 84848433 84848645 -10424006 + B3 SINE B2 1 216 0 6 1232 425 250 85 73 chr17 84848790 84848967 -10423684 + B3A SINE B2 5 183 -15 6 1232 1265 14 7 0 chr17 84849001 84849146 -10423505 + B1_Mus2 SINE Alu 2 147 0 6 1232 574 262 25 82 chr17 84849347 84849505 -10423146 - RSINE1 SINE B4 -5 160 12 6 1232 293 219 8 78 chr17 84849518 84849553 -10423098 + T-rich Low_complexity Low_complexity 93 125 0 6 1232 686 168 226 23 chr17 84849553 84849730 -10422921 - B3 SINE B2 -3 213 1 6 1232 293 219 8 78 chr17 84849730 84849823 -10422828 + T-rich Low_complexity Low_complexity 6 92 0 6 1232 1693 26 0 0 chr17 84851494 84851686 -10420965 + B2_Mm1a SINE B2 2 193 0 6 1232 1316 81 43 5 chr17 84851716 84851903 -10420748 + B2_Mm2 SINE B2 2 195 0 6 1232 609 313 203 8 chr17 84852157 84852644 -10420007 + L2a LINE L2 2209 2790 -629 6 1232 317 178 76 22 chr17 84852672 84852764 -10419887 + L1MB4 LINE L1 5572 5668 -506 6 1232 304 301 17 26 chr17 84852779 84852895 -10419756 + B1F SINE Alu 34 148 -1 6 1232 668 236 95 9 chr17 84852908 84853139 -10419512 + L1MB4 LINE L1 5652 5902 -278 6 1232 445 301 0 10 chr17 84853209 84853313 -10419338 + PB1D10 SINE Alu 5 107 -10 6 1232 200 180 40 0 chr17 84853321 84853371 -10419280 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 1232 405 226 0 0 chr17 84853372 84853456 -10419195 + L1MB4 LINE L1 5900 5983 -197 6 1232 271 270 94 17 chr17 84855074 84855191 -10417460 + L2a LINE L2 3286 3411 -15 6 1232 279 41 41 0 chr17 84856261 84856310 -10416341 + B3 SINE B2 164 214 -2 6 1232 284 386 43 0 chr17 84856385 84856525 -10416126 - RSINE1 SINE B4 -17 148 3 6 1232 21 0 0 0 chr17 84856583 84856604 -10416047 + AT_rich Low_complexity Low_complexity 1 21 0 6 1232 25 31 0 0 chr17 84857311 84857343 -10415308 + AT_rich Low_complexity Low_complexity 1 32 0 6 1232 419 261 63 56 chr17 84857427 84857569 -10415082 - ID_B1 SINE B4 -71 153 11 6 1232 216 0 0 0 chr17 84858255 84858279 -10414372 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1232 456 19 0 0 chr17 84858322 84858375 -10414276 + (CA)n Simple_repeat Simple_repeat 1 53 0 6 1232 275 308 67 9 chr17 84858375 84858469 -10414182 + RSINE1 SINE B4 67 164 -1 6 1232 292 242 24 36 chr17 84859301 84859468 -10413183 + (CACTG)n Simple_repeat Simple_repeat 2 166 0 6 1232 201 226 56 62 chr17 84860565 84860744 -10411907 + (CACTG)n Simple_repeat Simple_repeat 3 180 0 6 1232 208 238 34 56 chr17 84862013 84862191 -10410460 + (CACTG)n Simple_repeat Simple_repeat 3 176 0 7 1232 352 241 41 45 chr17 84863508 84863645 -10409006 - MTD LTR MaLR 0 421 289 7 1232 353 319 29 23 chr17 84863831 84864004 -10408647 - MER20 DNA MER1_type -1 218 45 7 1232 3059 74 86 116 chr17 84866211 84866746 -10405905 + MURVY-LTR LTR ERV1 1 519 0 7 1232 309 340 69 73 chr17 84867557 84867868 -10404783 + RLTR6-int LTR ERV1 2072 2387 -2676 7 1232 2883 57 49 0 chr17 84867868 84868237 -10404414 - RLTR10 LTR ERVK -3 387 1 7 1232 309 340 69 73 chr17 84868237 84868445 -10404206 + RLTR6-int LTR ERV1 2388 2589 -2474 7 1232 1014 301 73 58 chr17 84868779 84869829 -10402822 + RLTR6-int LTR ERV1 4923 5392 -2386 7 1232 2341 116 0 0 chr17 84869829 84870156 -10402495 - ORR1A2 LTR MaLR 0 327 1 7 1232 1008 312 86 70 chr17 84870156 84870197 -10402454 + RLTR6-int LTR ERV1 3809 3846 -1471 7 1232 828 301 47 47 chr17 84870645 84871032 -10401619 + RLTR6-int LTR ERV1 4931 5317 0 7 1232 270 250 22 33 chr17 84871203 84871294 -10401357 + RLTR14 LTR ERV1 270 359 -23 7 1232 391 185 0 0 chr17 84871418 84871483 -10401168 - ID4_ SINE ID -17 66 2 7 1232 243 273 110 92 chr17 84871614 84871704 -10400947 + ID_B1 SINE B4 109 202 -22 7 1232 507 258 218 82 chr17 84871704 84872034 -10400617 + MTE2b LTR MaLR 5 379 0 7 1232 243 273 110 92 chr17 84872034 84872052 -10400599 + ID_B1 SINE B4 203 219 -5 7 1232 850 174 21 0 chr17 84872062 84872206 -10400445 + B1_Mur2 SINE Alu 2 148 -1 7 1232 324 0 0 0 chr17 84872393 84872429 -10400222 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 7 1232 2707 65 99 0 chr17 84872519 84872902 -10399749 - BGLII LTR ERVK 0 421 1 7 1232 270 333 72 0 chr17 84872921 84873059 -10399592 - L2a LINE L2 -345 3081 2934 7 1232 2141 142 49 42 chr17 84873059 84873486 -10399165 - RMER6D LTR ERVK -281 439 10 7 1232 865 268 105 55 chr17 84874076 84874475 -10398176 + MTD LTR MaLR 1 419 0 7 1232 311 221 58 0 chr17 84874909 84874995 -10397656 - PB1D10 SINE Alu -1 116 26 7 1232 771 207 0 20 chr17 84875148 84875296 -10397355 + B1_Mus2 SINE Alu 3 147 0 7 1232 792 20 0 0 chr17 84875429 84875530 -10397121 + L1Md_T LINE L1 6481 6581 -1 7 1232 318 50 0 0 chr17 84875727 84875767 -10396884 + (TC)n Simple_repeat Simple_repeat 1 40 0 7 1232 1076 53 0 0 chr17 84875767 84875900 -10396751 - B1_Mm SINE Alu -12 135 3 7 1232 468 306 15 15 chr17 84875959 84876095 -10396556 - ID_B1 SINE B4 -2 222 87 7 1232 414 203 205 35 chr17 84876130 84876303 -10396348 + B3A SINE B2 1 186 -30 7 1232 468 128 294 0 chr17 84876349 84876458 -10396193 - B1_Mur1 SINE Alu 0 149 9 7 1232 704 188 179 17 chr17 84876871 84877044 -10395607 - B3 SINE B2 -14 202 2 7 1232 414 0 0 0 chr17 84877166 84877212 -10395439 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1232 25 31 0 0 chr17 84877614 84877646 -10395005 + AT_rich Low_complexity Low_complexity 1 32 0 7 1232 22 0 0 0 chr17 84878010 84878032 -10394619 + AT_rich Low_complexity Low_complexity 1 22 0 7 1232 685 228 109 66 chr17 84878037 84878220 -10394431 + B4 SINE B4 102 292 0 7 1232 280 290 50 0 chr17 84878343 84878443 -10394208 + ID_B1 SINE B4 119 223 -1 7 1232 234 0 0 0 chr17 84878507 84878533 -10394118 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 1232 528 215 245 0 chr17 84878746 84878909 -10393742 + B3 SINE B2 3 205 -11 7 1232 28 0 0 0 chr17 84878926 84878954 -10393697 + AT_rich Low_complexity Low_complexity 1 28 0 7 1232 333 251 118 35 chr17 84878954 84879123 -10393528 + MLT1D LTR MaLR 323 505 0 7 1232 263 301 61 61 chr17 84880270 84880468 -10392183 - LTR16A1 LTR ERVL -1 455 258 7 1232 252 164 0 0 chr17 84881462 84881529 -10391122 + (TA)n Simple_repeat Simple_repeat 1 67 0 7 1232 369 109 0 0 chr17 84881549 84881604 -10391047 + (CACG)n Simple_repeat Simple_repeat 1 55 0 7 1232 770 182 7 0 chr17 84881619 84881756 -10390895 + B1_Mur1 SINE Alu 12 149 0 7 1232 693 36 0 0 chr17 84881948 84882032 -10390619 + (TC)n Simple_repeat Simple_repeat 1 84 0 7 1232 351 207 12 0 chr17 84882233 84882315 -10390336 - Lx6 LINE L1 0 7460 7378 7 1232 1127 90 0 0 chr17 84882468 84882613 -10390038 + B1_Mus2 SINE Alu 3 147 0 7 1232 653 219 118 6 chr17 84882927 84883088 -10389563 + B3 SINE B2 38 216 0 7 1232 272 276 72 54 chr17 84883133 84883244 -10389407 - PB1 SINE Alu -10 117 5 7 1232 288 287 44 87 chr17 84883698 84883881 -10388770 + B4A SINE B4 1 175 -117 7 1232 351 0 0 0 chr17 84883921 84883960 -10388691 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1232 1020 211 60 0 chr17 84884004 84884203 -10388448 - B3 SINE B2 -5 211 1 7 1232 809 146 0 71 chr17 84884528 84884637 -10388014 + B1_Mus2 SINE Alu 4 112 -35 7 1232 1761 110 155 40 chr17 84884637 84884959 -10387692 + RLTR15 LTR ERVK 1 359 0 7 1232 809 146 0 71 chr17 84884959 84885004 -10387647 + B1_Mus2 SINE Alu 113 147 0 7 1232 622 193 10 22 chr17 84885285 84885418 -10387233 - B1_Mur1 SINE Alu -8 141 16 7 1232 1153 82 0 0 chr17 84885565 84885711 -10386940 + B1_Mus2 SINE Alu 1 146 -1 7 1232 771 268 96 75 chr17 84885741 84886063 -10386588 + MTEa LTR MaLR 39 367 -12 7 1232 585 61 0 0 chr17 84886246 84886328 -10386323 + (TATG)n Simple_repeat Simple_repeat 1 82 0 7 1232 531 288 0 7 chr17 84886348 84886488 -10386163 - ID_B1 SINE B4 -6 218 80 7 1232 211 358 65 9 chr17 84886841 84886948 -10385703 + L2c LINE L2 3059 3171 -216 7 1232 222 37 0 0 chr17 84887275 84887302 -10385349 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 7 1232 8285 50 7 0 chr17 84887354 84888634 -10384017 - L1Md_F2 LINE L1 0 6582 5294 7 1232 748 277 20 20 chr17 84888748 84888947 -10383704 + ID_B1 SINE B4 3 201 -23 7 1232 405 0 0 0 chr17 84888947 84888992 -10383659 + (TC)n Simple_repeat Simple_repeat 1 45 0 7 1232 333 0 0 0 chr17 84888992 84889029 -10383622 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1232 771 245 53 14 chr17 84889241 84889448 -10383203 + B3 SINE B2 2 216 0 7 1232 632 277 83 89 chr17 84889494 84889855 -10382796 - ORR1D2 LTR MaLR -4 366 8 7 1232 274 233 52 52 chr17 84890130 84890207 -10382444 + ID4_ SINE ID 3 79 -4 7 1232 1170 186 25 0 chr17 84890869 84891073 -10381578 + B3 SINE B2 3 211 -5 7 1232 2679 156 73 16 chr17 84891203 84891654 -10380997 + RLTR20A2 LTR ERVK 1 489 -89 7 1232 504 0 0 0 chr17 84891654 84891710 -10380941 + (TG)n Simple_repeat Simple_repeat 2 57 0 7 1232 2679 156 73 16 chr17 84891710 84891805 -10380846 + RLTR20A2 LTR ERVK 490 578 0 7 1232 348 43 0 0 chr17 84891865 84891911 -10380740 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1232 4494 171 47 51 chr17 84892507 84893581 -10379070 + MYSERV16_I-int LTR ERVK 3 1384 -1458 7 1232 3985 124 40 36 chr17 84893578 84893830 -10378821 + MYSERV16_I-int LTR ERVK 1062 1315 -1011 7 1232 1438 78 0 10 chr17 84893830 84894023 -10378628 + B2_Mm2 SINE B2 1 191 -4 7 1232 3985 124 40 36 chr17 84894023 84894068 -10378583 + MYSERV16_I-int LTR ERVK 1316 1365 -961 7 1232 2278 194 19 83 chr17 84894068 84894533 -10378118 + RLTR31_Mur LTR ERVK 1 447 -106 7 1232 1153 68 0 27 chr17 84894533 84894670 -10377981 + B1_Mus2 SINE Alu 1 137 -10 7 1232 266 0 29 0 chr17 84894670 84894704 -10377947 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1232 1153 68 0 27 chr17 84894704 84894716 -10377935 + B1_Mus2 SINE Alu 138 146 -1 7 1232 2278 194 19 83 chr17 84894716 84894841 -10377810 + RLTR31_Mur LTR ERVK 448 553 0 7 1232 3985 154 31 19 chr17 84894841 84895712 -10376939 + MYSERV16_I-int LTR ERVK 1366 2241 -85 7 1232 2622 151 36 86 chr17 84895717 84896325 -10376326 + RLTR20A2 LTR ERVK 1 578 0 7 1232 207 0 0 0 chr17 84896329 84896352 -10376299 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 1232 220 267 0 74 chr17 84896452 84896482 -10376169 - ID4_ SINE ID 0 83 9 7 1232 231 216 0 0 chr17 84896482 84896533 -10376118 - tRNA-Ala-GCY_ tRNA tRNA -22 53 3 7 1232 955 67 79 36 chr17 84896567 84896707 -10375944 + B1_Mm SINE Alu 2 147 0 7 1232 242 307 28 65 chr17 84898896 84899004 -10373647 + PB1D7 SINE Alu 11 114 -6 7 1232 852 106 0 48 chr17 84899010 84899198 -10373453 + GA-rich Low_complexity Low_complexity 2 180 0 7 1232 510 212 0 0 chr17 84899410 84899570 -10373081 + CT-rich Low_complexity Low_complexity 1 160 0 7 1232 288 0 0 0 chr17 84899570 84899602 -10373049 + (TG)n Simple_repeat Simple_repeat 1 32 0 7 1232 4630 238 114 25 chr17 84899604 84900996 -10371655 + Lx9 LINE L1 5900 7486 -158 7 1232 324 0 0 0 chr17 84900996 84901032 -10371619 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 1232 4630 236 119 22 chr17 84901032 84901146 -10371505 + Lx9 LINE L1 7487 7635 -9 7 1232 760 166 7 22 chr17 84901175 84901311 -10371340 - B1_Mus1 SINE Alu -7 141 8 7 1232 825 184 0 0 chr17 84901343 84901490 -10371161 + B1_Mur4 SINE Alu 4 150 0 7 1232 278 106 21 0 chr17 84901490 84901537 -10371114 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 7 1232 964 138 6 6 chr17 84902072 84902239 -10370412 + URR1A DNA MER1_type 54 220 -6 7 1232 222 37 0 0 chr17 84902314 84902341 -10370310 + (TCC)n Simple_repeat Simple_repeat 3 29 0 7 1232 1446 244 112 7 chr17 84902344 84902753 -10369898 - Lx8 LINE L1 -141 7332 6881 7 1232 310 257 150 0 chr17 84902905 84903018 -10369633 + RMER20B LTR ERVK 143 272 -355 7 1232 437 207 171 0 chr17 84903229 84903340 -10369311 - Lx8 LINE L1 -578 6895 6766 7 1232 501 330 37 5 chr17 84903713 84903902 -10368749 + RMER30 DNA MER1_type 7 201 -1 7 1232 347 53 0 51 chr17 84904270 84904329 -10368322 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 1232 314 231 116 110 chr17 84906301 84906447 -10366204 - RSINE1 SINE B4 -17 148 2 7 1232 227 266 42 133 chr17 84906754 84906919 -10365732 + MLT1A1 LTR MaLR 1 150 -258 7 1232 404 294 24 0 chr17 84907272 84907398 -10365253 - RCHARR1 DNA MER1_type -657 317 189 7 1232 445 289 23 0 chr17 84907428 84907556 -10365095 - RCHARR1 DNA MER1_type -842 132 2 7 1232 324 0 0 0 chr17 84907947 84907983 -10364668 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 7 1232 262 317 49 2 chr17 84908262 84908390 -10364261 - L2a LINE L2 -6 3420 3238 7 1232 582 273 136 32 chr17 84908584 84908834 -10363817 - B4A SINE B4 -16 276 1 7 1232 357 293 133 43 chr17 84908845 84908989 -10363662 - L1MB8 LINE L1 -16 6162 6009 7 1232 1342 147 32 0 chr17 84908989 84909207 -10363444 - URR1B DNA MER1_type 0 225 1 7 1232 357 293 133 43 chr17 84909207 84909362 -10363289 - L1MB8 LINE L1 -170 6008 5837 7 1232 208 281 0 12 chr17 84909363 84909446 -10363205 + CT-rich Low_complexity Low_complexity 1 82 0 7 1232 182 270 78 39 chr17 84909840 84909917 -10362734 + MIR SINE MIR 66 145 -63 7 1232 22 0 0 0 chr17 84910152 84910174 -10362477 + AT_rich Low_complexity Low_complexity 1 22 0 8 1232 376 67 0 32 chr17 84910318 84910380 -10362271 + (TCCCC)n Simple_repeat Simple_repeat 4 63 0 8 1232 234 174 0 0 chr17 84912156 84912202 -10360449 + CT-rich Low_complexity Low_complexity 1 46 0 8 1232 232 146 0 0 chr17 84912961 84913002 -10359649 - L1MB7 LINE L1 -16 6168 6128 8 1232 660 196 45 0 chr17 84913085 84913218 -10359433 + URR1B DNA MER1_type 1 139 -86 8 1232 1618 200 232 12 chr17 84913235 84913730 -10358921 - MTC-int LTR MaLR -449 809 206 8 1232 2360 180 52 18 chr17 84913751 84914255 -10358396 - RLTR12B LTR ERVK -6 522 2 8 1232 587 199 93 27 chr17 84914262 84914412 -10358239 - MTC-int LTR MaLR -1049 209 50 8 1232 188 34 0 33 chr17 84914412 84914442 -10358209 + (CAAAA)n Simple_repeat Simple_repeat 5 33 0 8 1232 1791 264 11 18 chr17 84914491 84914946 -10357705 + Lx6 LINE L1 6948 7399 -61 8 1232 226 257 37 19 chr17 84914932 84915039 -10357612 + Lx6 LINE L1 7326 7434 -26 8 1232 1217 194 100 30 chr17 84915098 84915168 -10357483 - MTD LTR MaLR 0 419 350 8 1232 653 74 21 0 chr17 84915168 84915263 -10357388 + (TTTA)n Simple_repeat Simple_repeat 4 100 0 8 1232 1217 194 100 30 chr17 84915263 84915531 -10357120 - MTD LTR MaLR -70 349 58 8 1232 3524 5 0 0 chr17 84915605 84915993 -10356658 - L1Md_A LINE L1 0 6582 6195 8 1232 736 231 39 94 chr17 84915999 84916253 -10356398 + Lx6 LINE L1 7179 7418 -42 8 1232 782 167 0 21 chr17 84916291 84916432 -10356219 - B1_Mur2 SINE Alu 0 149 12 8 1232 445 266 0 61 chr17 84916296 84916460 -10356191 - ID_B1 SINE B4 -2 222 69 8 1232 467 253 18 18 chr17 84916460 84916625 -10356026 - L1M4 LINE L1 -854 5292 5128 8 1232 1576 269 97 110 chr17 84916646 84917423 -10355228 - L1M4 LINE L1 -1129 5017 4165 8 1232 240 35 0 0 chr17 84917423 84917452 -10355199 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 8 1232 1576 269 97 110 chr17 84917452 84917879 -10354772 - L1M4 LINE L1 -1982 4164 3829 8 1232 510 61 0 0 chr17 84918313 84918379 -10354272 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 8 1232 481 227 16 56 chr17 84918685 84918811 -10353840 - B1F1 SINE Alu -5 144 24 8 1232 6097 128 26 6 chr17 84918842 84919815 -10352836 + Lx2 LINE L1 6005 6996 -1 8 1232 1028 89 7 40 chr17 84920188 84920340 -10352311 + B1_Mus2 SINE Alu 1 147 0 8 1232 235 45 44 22 chr17 84920341 84920386 -10352265 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 8 1232 274 23 23 23 chr17 84921397 84921441 -10351210 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 8 1232 1190 28 0 14 chr17 84921441 84921578 -10351073 - B1_Mus1 SINE Alu -10 138 2 8 1232 485 224 84 0 chr17 84921702 84921809 -10350842 + PB1D10 SINE Alu 1 116 -1 8 1232 601 184 23 23 chr17 84922078 84922225 -10350426 - MTD LTR MaLR -14 405 256 8 1232 412 201 222 7 chr17 84922280 84922415 -10350236 - MTD LTR MaLR -255 164 1 8 1232 356 275 82 82 chr17 84922426 84922516 -10350135 + MER33 DNA MER1_type 28 117 -207 8 1232 3188 63 7 21 chr17 84922516 84922937 -10349714 - L1Md_F2 LINE L1 -12 6570 6156 8 1232 356 275 82 82 chr17 84922937 84923040 -10349611 + MER33 DNA MER1_type 118 221 -103 8 1232 474 18 0 0 chr17 84923116 84923171 -10349480 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 8 1232 958 94 58 121 chr17 84923207 84923413 -10349238 - B2_Mm2 SINE B2 -2 193 1 8 1232 387 0 0 0 chr17 84924069 84924112 -10348539 + (TG)n Simple_repeat Simple_repeat 1 43 0 8 1232 905 276 58 11 chr17 84924114 84924139 -10348512 - B4 SINE B4 -20 272 248 8 1232 908 163 174 0 chr17 84924139 84924329 -10348322 + URR1A DNA MER1_type 2 224 -2 8 1232 922 263 22 9 chr17 84924329 84924563 -10348088 - B4A SINE B4 -45 247 1 8 1232 19327 66 16 6 chr17 84924619 84927885 -10344766 - MusHAL1 LINE L1 -55 3298 11 8 1232 306 304 92 18 chr17 84928362 84928526 -10344125 - MIR SINE MIR -24 238 63 8 1232 211 342 116 37 chr17 84928984 84929148 -10343503 - MIRb SINE MIR -21 247 71 8 1232 300 272 12 36 chr17 84929255 84929339 -10343312 - ID4 SINE ID -1 82 1 8 1232 198 0 0 0 chr17 84929512 84929534 -10343117 + (TTTTTG)n Simple_repeat Simple_repeat 4 25 0 8 1232 351 44 0 0 chr17 84930782 84930827 -10341824 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 1232 318 130 0 0 chr17 84931108 84931162 -10341489 + B1_Mur4 SINE Alu 96 149 -1 8 1232 345 281 33 11 chr17 84931243 84931333 -10341318 + B4A SINE B4 6 97 -195 8 1232 431 232 30 10 chr17 84931378 84931478 -10341173 + B4A SINE B4 189 290 -2 8 1232 1353 195 75 29 chr17 84931568 84931917 -10340734 - ORR1D2 LTR MaLR -4 366 2 8 1232 337 362 51 19 chr17 84932251 84932465 -10340186 - HAL1 LINE L1 -1530 977 757 8 1232 324 127 0 0 chr17 84932928 84932983 -10339668 + (CA)n Simple_repeat Simple_repeat 1 55 0 8 1232 242 272 124 116 chr17 84933007 84933136 -10339515 - RSINE1 SINE B4 -22 143 14 8 1232 316 311 25 0 chr17 84933193 84933312 -10339339 + HAL1 LINE L1 1666 1787 -720 8 1232 227 294 64 53 chr17 84933701 84933888 -10338763 + HAL1 LINE L1 2183 2371 -136 8 1232 396 0 0 0 chr17 84934119 84934163 -10338488 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1232 968 140 21 0 chr17 84934410 84934553 -10338098 - B1_Mur3 SINE Alu -2 147 2 8 1233 3868 183 66 77 chr17 84935343 84935776 -10336875 + RMER19B LTR ERVK 6 417 -485 8 1233 2914 134 0 7 chr17 84935776 84936212 -10336439 + RLTR10C LTR ERVK 1 433 -3 8 1233 3868 183 66 77 chr17 84936212 84936685 -10335966 + RMER19B LTR ERVK 418 902 0 8 1233 306 267 51 17 chr17 84936778 84936896 -10335755 - B4A SINE B4 -165 127 6 8 1233 374 308 42 0 chr17 84936967 84937087 -10335564 + B3 SINE B2 80 204 -12 8 1233 28 0 0 0 chr17 84937096 84937124 -10335527 + AT_rich Low_complexity Low_complexity 1 28 0 8 1233 607 132 57 0 chr17 84937239 84937345 -10335306 - B1_Mm SINE Alu 0 147 36 8 1233 447 257 141 25 chr17 84937396 84937789 -10334862 + Lx7 LINE L1 7136 7696 0 8 1233 180 125 0 0 chr17 84937930 84937962 -10334689 + (T)n Simple_repeat Simple_repeat 1 32 0 8 1233 1824 147 50 21 chr17 84938058 84938487 -10334164 - RMER6A LTR ERVK -7 749 329 8 1233 353 151 46 0 chr17 84938499 84938651 -10334000 + CT-rich Low_complexity Low_complexity 2 160 0 8 1233 401 193 155 49 chr17 84938659 84938904 -10333747 - RMER6A LTR ERVK -238 518 248 8 1233 222 62 0 0 chr17 84938909 84938941 -10333710 + (TCTG)n Simple_repeat Simple_repeat 2 33 0 8 1233 274 173 39 0 chr17 84939004 84939056 -10333595 - B3 SINE B2 -161 55 2 8 1233 878 295 169 9 chr17 84940012 84940474 -10332177 - MLT1F LTR MaLR -9 539 4 8 1233 563 145 0 33 chr17 84940533 84940654 -10331997 - L1Md_F2 LINE L1 -1 6581 6465 8 1233 249 214 27 72 chr17 84941101 84941212 -10331439 - L1M5 LINE L1 -2381 3765 3660 8 1233 331 306 70 4 chr17 84941605 84941835 -10330816 - L1MD LINE L1 -2563 3583 3339 8 1233 1908 216 17 77 chr17 84941879 84942426 -10330225 - RMER19C LTR ERVK 0 611 59 8 1233 330 238 0 0 chr17 84943103 84943166 -10329485 + Lx6 LINE L1 6807 6869 -591 8 1233 1140 261 56 32 chr17 84943142 84943507 -10329144 + Lx5 LINE L1 6620 6982 -76 8 1233 21 0 0 0 chr17 84943664 84943685 -10328966 + AT_rich Low_complexity Low_complexity 1 21 0 8 1233 280 288 25 0 chr17 84943754 84943834 -10328817 - ID4 SINE ID -1 82 1 8 1233 444 19 0 0 chr17 84944146 84944199 -10328452 + (TG)n Simple_repeat Simple_repeat 1 53 0 8 1233 423 0 0 0 chr17 84944199 84944245 -10328406 + (GA)n Simple_repeat Simple_repeat 1 47 0 8 1233 242 339 17 0 chr17 84944248 84944307 -10328344 - tRNA-Ala-GCY_ tRNA tRNA -15 60 1 8 1233 656 200 13 67 chr17 84944393 84944543 -10328108 - B1_Mus1 SINE Alu -1 147 6 8 1233 335 269 0 96 chr17 84944446 84944561 -10328090 - MT2B LTR ERVL -345 256 153 8 1233 271 255 78 10 chr17 84945242 84945345 -10327306 - MLT2B2 LTR ERVL -405 110 1 8 1233 249 264 23 11 chr17 84945485 84945573 -10327078 + (TG)n Simple_repeat Simple_repeat 2 90 0 8 1233 207 0 0 0 chr17 84946408 84946431 -10326220 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 1233 29 28 0 0 chr17 84947656 84947692 -10324959 + AT_rich Low_complexity Low_complexity 1 36 0 8 1233 197 75 75 0 chr17 84947868 84947921 -10324730 + (CAAA)n Simple_repeat Simple_repeat 2 58 0 8 1233 549 181 0 0 chr17 84947962 84948056 -10324595 + B3 SINE B2 37 130 -86 8 1233 189 0 0 0 chr17 84948096 84948117 -10324534 + (CAAT)n Simple_repeat Simple_repeat 2 22 0 8 1233 434 182 26 26 chr17 84948125 84948277 -10324374 + GA-rich Low_complexity Low_complexity 2 153 0 8 1233 3093 79 0 54 chr17 84948382 84948824 -10323827 - L1_Mus1 LINE L1 0 6567 6150 8 1233 230 206 26 64 chr17 84949021 84949099 -10323552 - L1MC5 LINE L1 -142 7819 7745 8 1233 562 206 0 0 chr17 84949363 84949460 -10323191 - PB1D10 SINE Alu -18 99 3 8 1233 320 244 130 0 chr17 84949538 84949668 -10322983 - L1M3 LINE L1 -378 5805 5654 8 1233 29 47 0 0 chr17 84949670 84949713 -10322938 + AT_rich Low_complexity Low_complexity 1 43 0 8 1233 254 346 39 0 chr17 84950066 84950170 -10322481 - L1M5 LINE L1 -593 5569 5462 8 1233 238 327 221 30 chr17 84950766 84950965 -10321686 + MIR SINE MIR 5 241 -21 8 1233 763 279 75 102 chr17 84951108 84951159 -10321492 - MER77 LTR ERVL -11 596 546 8 1233 207 0 0 0 chr17 84951159 84951182 -10321469 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 8 1233 763 279 75 102 chr17 84951182 84951541 -10321110 - MER77 LTR ERVL -62 545 197 8 1233 1332 234 36 22 chr17 84951573 84951931 -10320720 + ORR1D2 LTR MaLR 6 368 -2 8 1233 343 331 90 51 chr17 84951935 84952113 -10320538 - MER77 LTR ERVL -414 193 9 8 1233 821 158 180 0 chr17 84952297 84952480 -10320171 - B3 SINE B2 0 216 1 8 1233 792 0 0 0 chr17 84953480 84953568 -10319083 + (TC)n Simple_repeat Simple_repeat 2 89 0 8 1233 306 0 0 0 chr17 84953568 84953601 -10319050 + (TG)n Simple_repeat Simple_repeat 1 34 0 8 1233 1212 61 0 0 chr17 84953678 84953825 -10318826 + B1_Mus1 SINE Alu 1 147 -1 8 1233 686 281 149 66 chr17 84953825 84954415 -10318236 - Lx8 LINE L1 -4 7469 6831 8 1233 639 242 105 0 chr17 84954415 84954605 -10318046 - B4A SINE B4 -65 227 18 8 1233 180 200 0 0 chr17 84954962 84955002 -10317649 + (TATG)n Simple_repeat Simple_repeat 1 40 0 8 1233 454 247 16 7 chr17 84955009 84955453 -10317198 + (TG)n Simple_repeat Simple_repeat 1 448 0 9 1233 578 175 17 6 chr17 84955507 84955685 -10316966 + (TG)n Simple_repeat Simple_repeat 1 180 0 9 1233 635 240 65 0 chr17 84957104 84957258 -10315393 - RSINE1 SINE B4 0 165 2 9 1233 301 299 47 0 chr17 84957381 84957488 -10315163 + PB1D10 SINE Alu 5 116 -1 9 1233 490 224 18 53 chr17 84957603 84957716 -10314935 + PB1D7 SINE Alu 1 109 -11 9 1233 808 252 135 0 chr17 84958182 84958508 -10314143 - MTEa LTR MaLR -9 370 1 9 1233 350 194 154 10 chr17 84958577 84958681 -10313970 - PB1D7 SINE Alu 0 120 2 9 1233 23 0 0 0 chr17 84959067 84959090 -10313561 + AT_rich Low_complexity Low_complexity 1 23 0 9 1233 21 36 0 0 chr17 84959373 84959401 -10313250 + AT_rich Low_complexity Low_complexity 1 28 0 9 1233 751 253 49 31 chr17 84960784 84961066 -10311585 - B4A SINE B4 -14 278 1 9 1233 950 130 20 0 chr17 84961408 84961554 -10311097 - B1_Mur3 SINE Alu 0 149 1 9 1233 453 208 127 48 chr17 84961695 84961821 -10310830 - B1F SINE Alu -7 142 7 9 1233 21 36 0 0 chr17 84962163 84962191 -10310460 + AT_rich Low_complexity Low_complexity 1 28 0 9 1233 324 102 0 0 chr17 84962227 84962276 -10310375 + (CATA)n Simple_repeat Simple_repeat 2 50 0 9 1233 858 309 77 15 chr17 84962280 84962605 -10310046 - MER2 DNA MER2_type 0 345 1 9 1233 243 261 43 0 chr17 84962866 84962935 -10309716 - RSINE1 SINE B4 -93 72 1 9 1233 201 147 0 0 chr17 84966339 84966373 -10306278 + (CCCA)n Simple_repeat Simple_repeat 2 35 0 9 1233 273 237 135 31 chr17 84966439 84966535 -10306116 - LTR79 LTR ERVL -32 495 390 9 1233 323 248 174 0 chr17 84967137 84967246 -10305405 - RSINE1 SINE B4 -35 130 3 9 1233 1005 73 80 0 chr17 84967354 84967491 -10305160 + B1_Mus1 SINE Alu 1 148 0 9 1233 290 319 128 47 chr17 84969289 84969585 -10303066 + L1MB2 LINE L1 5821 6140 -31 9 1233 485 258 0 32 chr17 84969966 84970090 -10302561 + ID_B1 SINE B4 105 224 0 9 1233 351 235 10 0 chr17 84970131 84970229 -10302422 + PB1D7 SINE Alu 22 120 0 9 1233 1100 82 7 0 chr17 84971251 84971397 -10301254 + B1_Mus2 SINE Alu 1 147 0 9 1233 229 26 26 26 chr17 84971603 84971642 -10301009 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 9 1233 26 0 0 0 chr17 84971708 84971734 -10300917 + AT_rich Low_complexity Low_complexity 1 26 0 9 1233 3301 132 16 4 chr17 84971734 84972245 -10300406 - Lx LINE L1 -8 6646 6130 9 1233 311 338 42 36 chr17 84972470 84972636 -10300015 - B4A SINE B4 -122 170 4 9 1233 538 216 21 63 chr17 84973027 84973170 -10299481 - ID_B1 SINE B4 -3 221 85 9 1233 200 316 73 10 chr17 84973493 84973589 -10299062 + MIR3 SINE MIR 71 172 -36 9 1233 703 227 75 30 chr17 84974760 84974960 -10297691 + B3 SINE B2 5 213 -3 9 1233 657 128 34 8 chr17 84975695 84975813 -10296838 - B1_Mus1 SINE Alu -21 127 7 9 1233 438 36 0 0 chr17 84976820 84976876 -10295775 + (GA)n Simple_repeat Simple_repeat 1 56 0 9 1233 446 287 78 18 chr17 84977051 84977218 -10295433 - B4A SINE B4 -114 178 2 9 1233 253 323 181 24 chr17 84977251 84977378 -10295273 + RSINE1 SINE B4 2 148 -17 9 1233 296 48 24 0 chr17 84977389 84977431 -10295220 + (TAGA)n Simple_repeat Simple_repeat 3 45 0 9 1233 685 175 12 0 chr17 84977764 84977935 -10294716 + (TG)n Simple_repeat Simple_repeat 1 173 0 9 1233 453 279 184 43 chr17 84977962 84978217 -10294434 - B4A SINE B4 0 292 2 9 1233 568 195 62 8 chr17 84978315 84978437 -10294214 - B1_Mur1 SINE Alu -2 147 19 9 1233 288 0 0 0 chr17 84978437 84978469 -10294182 + (GA)n Simple_repeat Simple_repeat 1 32 0 9 1233 370 214 29 10 chr17 84979864 84979968 -10292683 - L1ME2z LINE L1 -19 6425 6320 9 1233 192 300 36 65 chr17 84980593 84980732 -10291919 + MIR SINE MIR 113 247 -15 9 1233 481 124 21 0 chr17 84981091 84981188 -10291463 + (TC)n Simple_repeat Simple_repeat 2 100 0 9 1233 372 267 52 7 chr17 84981191 84981327 -10291324 - B1F SINE Alu -7 142 1 9 1233 1281 56 0 0 chr17 84981861 84982040 -10290611 + (TG)n Simple_repeat Simple_repeat 2 180 0 9 1233 210 160 0 0 chr17 84982055 84982105 -10290546 + (TG)n Simple_repeat Simple_repeat 1 50 0 9 1233 1281 169 4 30 chr17 84982325 84982557 -10290094 - URR1A DNA MER1_type 0 226 1 9 1233 594 91 42 68 chr17 84983023 84983141 -10289510 - L1_Mus1 LINE L1 0 6567 6453 9 1233 655 195 69 34 chr17 84983931 84984106 -10288545 + B3 SINE B2 33 213 -3 9 1233 322 279 324 17 chr17 84984249 84984771 -10287880 - L2 LINE L2 -533 2886 2205 9 1233 742 227 19 57 chr17 84986517 84986727 -10285924 + B3 SINE B2 15 216 0 9 1233 975 104 21 0 chr17 84987933 84988077 -10284574 + B1_Mus1 SINE Alu 2 148 0 9 1233 21 0 0 0 chr17 84988154 84988175 -10284476 + AT_rich Low_complexity Low_complexity 1 21 0 9 1233 444 246 7 80 chr17 84988403 84988540 -10284111 + RSINE1 SINE B4 34 160 -5 9 1233 521 272 32 25 chr17 84989217 84989477 -10283174 - MTEa LTR MaLR -1 378 69 9 1233 224 250 16 0 chr17 84989609 84989673 -10282978 - ID4_ SINE ID -7 76 12 9 1233 257 0 0 29 chr17 84989980 84990014 -10282637 + (TTG)n Simple_repeat Simple_repeat 2 34 0 9 1233 225 132 0 0 chr17 84990310 84990348 -10282303 + (ATG)n Simple_repeat Simple_repeat 3 40 0 9 1233 376 314 6 17 chr17 84990594 84990766 -10281885 - L1M4 LINE L1 -3701 2445 2276 9 1233 19781 70 38 1 chr17 84991182 84994383 -10278268 + MusHAL1 LINE L1 22 3353 0 9 1233 420 152 120 0 chr17 84994549 84994641 -10278010 + B3A SINE B2 1 103 -95 9 1233 695 44 0 0 chr17 84996864 84996954 -10275697 - B1_Mus2 SINE Alu -9 138 49 9 1233 180 0 0 0 chr17 84997080 84997100 -10275551 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 9 1233 363 23 0 0 chr17 84997902 84997946 -10274705 + (CA)n Simple_repeat Simple_repeat 2 45 0 9 1233 948 71 50 0 chr17 84997976 84998116 -10274535 - B1_Mus1 SINE Alu 0 148 2 9 1233 643 179 80 16 chr17 84998906 84999031 -10273620 + RSINE1 SINE B4 3 135 -30 9 1233 183 42 0 0 chr17 84999059 84999083 -10273568 + (CAA)n Simple_repeat Simple_repeat 1 24 0 9 1233 288 0 0 0 chr17 85000595 85000627 -10272024 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 1233 386 283 131 16 chr17 85001438 85001708 -10270943 - MTD LTR MaLR 0 419 88 2 1233 270 231 95 56 chr17 85003261 85003379 -10269272 - PB1D10 SINE Alu 0 120 1 3 1233 210 105 0 0 chr17 85004012 85004050 -10268601 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1233 280 287 73 73 chr17 85004243 85004367 -10268284 + PB1 SINE Alu 1 124 -3 5 1233 1373 72 17 6 chr17 85004756 85004937 -10267714 - B2_Mm2 SINE B2 -10 185 3 6 1233 2004 143 62 32 chr17 85004975 85005164 -10267487 - ORR1C2 LTR MaLR -4 380 177 7 1233 468 0 0 0 chr17 85005164 85005216 -10267435 + (GA)n Simple_repeat Simple_repeat 1 52 0 8 1233 2004 143 62 32 chr17 85005216 85005395 -10267256 - ORR1C2 LTR MaLR -208 176 1 7 1233 212 147 0 0 chr17 85005652 85005686 -10266965 + (CA)n Simple_repeat Simple_repeat 1 34 0 9 1233 744 210 0 0 chr17 85005691 85005853 -10266798 + (TA)n Simple_repeat Simple_repeat 1 162 0 1 1233 438 258 0 0 chr17 85005869 85005930 -10266721 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 1233 339 85 0 0 chr17 85005930 85005977 -10266674 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 1233 438 258 0 0 chr17 85005977 85006093 -10266558 + (CA)n Simple_repeat Simple_repeat 2 117 0 1 1233 441 0 0 0 chr17 85006983 85007032 -10265619 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 1233 525 253 0 93 chr17 85007247 85007408 -10265243 + ID_B1 SINE B4 79 224 0 1 1233 236 318 40 115 chr17 85007449 85007623 -10265028 - MLT1G1 LTR MaLR -88 491 331 1 1233 1245 108 0 11 chr17 85008771 85008949 -10263702 + B2_Mm2 SINE B2 1 176 -19 1 1233 301 295 113 16 chr17 85009057 85009181 -10263470 - RSINE1 SINE B4 -25 140 5 1 1233 1391 137 78 0 chr17 85009223 85009479 -10263172 + MTC LTR MaLR 1 276 -145 1 1233 314 253 24 0 chr17 85009534 85009617 -10263034 - MTE2b LTR MaLR -2 377 293 2 1233 458 270 134 6 chr17 85009663 85009827 -10262824 + MTE2a LTR MaLR 195 379 0 2 1233 555 188 77 0 chr17 85010394 85010511 -10262140 - ID_B1 SINE B4 0 224 99 2 1233 246 128 0 0 chr17 85012156 85012195 -10260456 + (TTC)n Simple_repeat Simple_repeat 2 40 0 2 1233 1191 68 0 0 chr17 85012196 85012344 -10260307 - B1_Mus1 SINE Alu 0 148 1 2 1233 320 278 43 17 chr17 85012384 85012501 -10260150 + PB1 SINE Alu 1 120 -7 2 1233 948 168 0 0 chr17 85012605 85012966 -10259685 + (CA)n Simple_repeat Simple_repeat 1 361 0 2 1233 873 172 0 0 chr17 85012995 85013175 -10259476 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 1233 882 167 0 0 chr17 85013189 85013369 -10259282 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 1233 885 194 0 0 chr17 85013405 85013950 -10258701 + (CA)n Simple_repeat Simple_repeat 1 545 0 2 1233 659 120 0 8 chr17 85014187 85014305 -10258346 - B1_Mus1 SINE Alu -26 122 6 2 1233 453 189 51 59 chr17 85014201 85014319 -10258332 - B4 SINE B4 -94 198 82 2 1233 588 255 170 38 chr17 85014319 85014584 -10258067 - L1MB3 LINE L1 -135 6048 5749 2 1233 710 201 81 0 chr17 85015858 85016007 -10256644 - RSINE1 SINE B4 -3 162 2 3 1233 398 286 19 0 chr17 85016206 85016311 -10256340 + PB1D10 SINE Alu 1 107 -10 3 1233 322 207 44 104 chr17 85016561 85016696 -10255955 - Lx9 LINE L1 -1 7643 7517 3 1233 189 74 0 0 chr17 85016697 85016724 -10255927 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 1233 213 65 0 0 chr17 85017683 85017714 -10254937 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1233 1252 27 0 0 chr17 85017714 85017860 -10254791 - B1_Mm SINE Alu 0 147 2 3 1233 378 0 0 0 chr17 85018147 85018189 -10254462 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1233 461 241 55 55 chr17 85018189 85018334 -10254317 - RSINE1 SINE B4 -20 145 1 3 1233 958 194 94 28 chr17 85018615 85018827 -10253824 - URR1A DNA MER1_type 0 226 1 3 1233 591 327 62 28 chr17 85020037 85020361 -10252290 - ORR1E LTR MaLR -24 335 1 3 1233 1029 70 14 21 chr17 85021054 85021199 -10251452 + B1_Mus1 SINE Alu 5 148 0 4 1233 259 286 78 0 chr17 85022069 85022146 -10250505 - ID4_ SINE ID 0 83 1 4 1233 441 0 0 0 chr17 85022150 85022199 -10250452 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 1233 390 21 0 0 chr17 85022199 85022245 -10250406 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1233 204 67 0 0 chr17 85022746 85022776 -10249875 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 4 1233 1602 200 34 9 chr17 85022778 85023106 -10249545 - MTC LTR MaLR -44 377 42 4 1233 1131 233 53 29 chr17 85023138 85023478 -10249173 + ORR1D2 LTR MaLR 21 368 -2 4 1233 450 105 35 11 chr17 85023656 85023743 -10248908 - URR1B DNA MER1_type 0 225 137 4 1233 615 189 0 0 chr17 85023744 85023850 -10248801 + U6 snRNA snRNA 2 107 0 4 1233 633 217 56 0 chr17 85023851 85024012 -10248639 + Lx5 LINE L1 6874 7043 -7 4 1233 888 139 20 7 chr17 85024017 85024169 -10248482 - URR1B DNA MER1_type -72 153 1 4 1233 1121 64 14 0 chr17 85025161 85025301 -10247350 + B1_Mus1 SINE Alu 1 142 -6 5 1233 563 181 0 8 chr17 85025303 85025420 -10247231 + GA-rich Low_complexity Low_complexity 3 118 0 5 1233 189 0 0 0 chr17 85025606 85025627 -10247024 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 5 1233 250 299 0 0 chr17 85026064 85026141 -10246510 + C-rich Low_complexity Low_complexity 1 77 0 5 1233 183 283 0 0 chr17 85027042 85027088 -10245563 + L2b LINE L2 3320 3365 -10 5 1233 423 242 130 31 chr17 85027088 85027250 -10245401 + B4A SINE B4 2 179 -113 5 1233 881 209 63 0 chr17 85028584 85028775 -10243876 + B3 SINE B2 2 204 -12 5 1233 234 0 0 0 chr17 85028775 85028801 -10243850 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 5 1233 391 193 38 62 chr17 85029037 85029197 -10243454 + (CA)n Simple_repeat Simple_repeat 1 156 0 5 1233 3406 44 6 96 chr17 85029203 85029682 -10242969 - RLTR10C LTR ERVK 0 436 1 5 1233 339 238 39 50 chr17 85029713 85029894 -10242757 + (CA)n Simple_repeat Simple_repeat 2 180 0 6 1233 22 0 0 0 chr17 85029991 85030013 -10242638 + AT_rich Low_complexity Low_complexity 1 22 0 6 1233 189 121 0 0 chr17 85030273 85030306 -10242345 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 6 1233 534 222 65 47 chr17 85031730 85031900 -10240751 + B3 SINE B2 30 202 -14 6 1233 778 257 110 42 chr17 85031952 85032289 -10240362 + L1MB2 LINE L1 5812 6171 0 6 1233 25 65 0 0 chr17 85032312 85032358 -10240293 + AT_rich Low_complexity Low_complexity 1 46 0 6 1233 409 254 100 43 chr17 85033234 85033374 -10239277 - B1F SINE Alu 0 149 2 6 1233 204 194 0 0 chr17 85033561 85033597 -10239054 + C-rich Low_complexity Low_complexity 1 36 0 6 1233 666 254 0 0 chr17 85033936 85034070 -10238581 + B1_Mur1 SINE Alu 10 143 -6 6 1233 843 169 6 11 chr17 85034071 85034250 -10238401 + GA-rich Low_complexity Low_complexity 3 180 0 6 1233 282 27 27 0 chr17 85034250 85034287 -10238364 + (GAAA)n Simple_repeat Simple_repeat 1 38 0 7 1233 514 234 19 0 chr17 85036342 85036449 -10236202 - PB1D9 SINE Alu -5 115 7 7 1233 426 196 0 0 chr17 85036450 85036552 -10236099 + (TG)n Simple_repeat Simple_repeat 1 102 0 7 1233 355 232 0 101 chr17 85036552 85036673 -10235978 - B3A SINE B2 -13 203 97 7 1233 929 194 112 4 chr17 85036755 85037014 -10235637 - MT2A LTR ERVL -158 443 1 7 1233 4094 211 52 5 chr17 85037063 85037922 -10234729 - Lx7 LINE L1 -564 7132 6233 7 1233 198 128 0 0 chr17 85038291 85038330 -10234321 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 7 1233 303 28 0 0 chr17 85038385 85038421 -10234230 + (TTG)n Simple_repeat Simple_repeat 2 37 0 7 1233 188 135 0 26 chr17 85038448 85038486 -10234165 + CT-rich Low_complexity Low_complexity 1 37 0 7 1233 669 175 70 35 chr17 85038497 85038639 -10234012 - B1_Mus1 SINE Alu -1 147 1 7 1233 2703 105 4 80 chr17 85039218 85039683 -10232968 - RLTR23 LTR ERV1 0 430 1 8 1233 698 194 0 53 chr17 85040227 85040379 -10232272 + B1_Mur3 SINE Alu 1 144 -5 8 1233 417 20 0 0 chr17 85040437 85040487 -10232164 + (TG)n Simple_repeat Simple_repeat 2 51 0 8 1233 1419 263 75 38 chr17 85040684 85040954 -10231697 - L1MB3 LINE L1 -243 5940 5662 8 1233 551 173 150 0 chr17 85040954 85041081 -10231570 + B1F SINE Alu 3 148 -1 8 1233 1419 263 75 38 chr17 85041081 85041343 -10231308 - L1MB3 LINE L1 -522 5661 5388 8 1233 585 189 16 47 chr17 85041348 85041476 -10231175 - B3 SINE B2 -9 207 84 8 1233 265 125 261 0 chr17 85041513 85041601 -10231050 - L1MB3 LINE L1 -783 5395 5285 8 1233 25 0 0 0 chr17 85042812 85042837 -10229814 + GC_rich Low_complexity Low_complexity 1 25 0 8 1233 657 122 19 0 chr17 85043071 85043178 -10229473 + B1_Mus2 SINE Alu 33 141 -6 8 1233 288 0 0 0 chr17 85043180 85043212 -10229439 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 8 1233 190 319 0 0 chr17 85044468 85044515 -10228136 + MIR SINE MIR 7 53 -209 8 1233 231 227 0 0 chr17 85045342 85045408 -10227243 + G-rich Low_complexity Low_complexity 1 66 0 9 1233 397 191 0 0 chr17 85047275 85047343 -10225308 + B3A SINE B2 8 75 -123 9 1233 393 22 0 0 chr17 85047353 85047399 -10225252 + (CA)n Simple_repeat Simple_repeat 2 47 0 9 1233 25 75 0 0 chr17 85047541 85047594 -10225057 + AT_rich Low_complexity Low_complexity 1 53 0 9 1233 285 164 90 0 chr17 85047610 85047677 -10224974 + ID4_ SINE ID 1 73 -10 9 1233 796 179 18 3 chr17 85047706 85048002 -10224649 + (TG)n Simple_repeat Simple_repeat 1 300 0 9 1233 703 92 30 8 chr17 85050565 85050697 -10221954 + (TAGA)n Simple_repeat Simple_repeat 2 136 0 9 1233 2308 129 48 13 chr17 85051443 85051836 -10220815 - MTB_Mm LTR MaLR 0 407 1 9 1233 674 229 34 14 chr17 85052592 85052738 -10219913 - B1_Mur1 SINE Alu 0 149 1 9 1233 207 0 0 0 chr17 85053407 85053430 -10219221 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 1233 234 226 16 16 chr17 85053453 85053516 -10219135 - B4A SINE B4 -221 71 9 1 1233 844 163 0 0 chr17 85053555 85053696 -10218955 + B1_Mur2 SINE Alu 9 149 0 1 1233 370 200 263 0 chr17 85053712 85053807 -10218844 - B1_Mur2 SINE Alu -20 129 10 1 1233 395 244 156 66 chr17 85053727 85053894 -10218757 - ID_B1 SINE B4 -41 183 2 1 1233 324 263 81 0 chr17 85053894 85053993 -10218658 - PB1D10 SINE Alu -10 107 1 1 1233 903 200 75 0 chr17 85054022 85054222 -10218429 - B3 SINE B2 0 216 2 1 1233 450 0 0 0 chr17 85055035 85055085 -10217566 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1233 572 293 64 0 chr17 85055091 85055231 -10217420 - RSINE1 SINE B4 -16 149 1 1 1233 462 116 313 26 chr17 85056747 85056862 -10215789 - B2_Mm2 SINE B2 -1 194 47 1 1233 1178 101 60 0 chr17 85056946 85057114 -10215537 - B2_Mm1t SINE B2 -14 179 2 1 1233 690 257 29 24 chr17 85058654 85058861 -10213790 + B3 SINE B2 3 210 -6 1 1233 2297 42 0 7 chr17 85058928 85059214 -10213437 + L1Md_F3 LINE L1 6300 6583 -1 1 1233 514 235 169 12 chr17 85059241 85059312 -10213339 + B4A SINE B4 1 98 -194 1 1233 248 341 58 36 chr17 85059312 85059449 -10213202 + B1_Mur3 SINE Alu 2 141 -8 1 1233 248 332 120 62 chr17 85059749 85060025 -10212626 + RMER17B LTR ERVK 92 383 -575 1 1233 730 174 79 7 chr17 85060141 85060260 -10212391 + B1_Mur4 SINE Alu 1 118 -32 1 1233 378 0 0 0 chr17 85060260 85060302 -10212349 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1233 730 174 79 7 chr17 85060302 85060321 -10212330 + B1_Mur4 SINE Alu 119 147 -3 1 1233 919 260 10 0 chr17 85060529 85060737 -10211914 + B3 SINE B2 1 210 -6 1 1233 991 75 6 64 chr17 85060797 85060953 -10211698 - B1_Mus1 SINE Alu 0 148 2 1 1233 834 161 0 0 chr17 85061833 85062007 -10210644 + (TG)n Simple_repeat Simple_repeat 2 175 0 1 1233 553 222 11 0 chr17 85062050 85062226 -10210425 + (TG)n Simple_repeat Simple_repeat 1 178 0 1 1233 456 264 0 8 chr17 85062242 85062747 -10209904 + (TG)n Simple_repeat Simple_repeat 1 500 0 1 1233 498 246 164 57 chr17 85062752 85063015 -10209636 - B4A SINE B4 0 292 2 1 1233 1085 198 24 24 chr17 85063429 85063641 -10209010 + B3 SINE B2 5 216 0 1 1233 224 313 58 44 chr17 85064796 85064855 -10207796 - B3A SINE B2 -53 140 2 1 1233 490 141 51 0 chr17 85064855 85064933 -10207718 - ID SINE ID -141 83 2 1 154 854 110 18 6 chr17 85065664 85065829 -10206822 + (TCTA)n Simple_repeat Simple_repeat 2 168 0 1 1234 1101 45 28 31 chr17 85065872 85066978 -10205673 + (TG)n Simple_repeat Simple_repeat 1 1102 0 1 1234 209 191 0 0 chr17 85069225 85069267 -10203384 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1234 692 311 0 18 chr17 85070197 85070361 -10202290 + RSINE1 SINE B4 3 163 -2 1 1234 195 42 0 0 chr17 85070370 85070394 -10202257 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 1234 25 0 0 0 chr17 85070394 85070419 -10202232 + AT_rich Low_complexity Low_complexity 1 25 0 1 1234 396 0 0 0 chr17 85070922 85070966 -10201685 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1234 837 229 164 5 chr17 85070977 85071196 -10201455 - B4A SINE B4 -33 259 6 1 1234 196 286 88 79 chr17 85071215 85071329 -10201322 + MIRb SINE MIR 81 195 -73 1 1234 320 173 0 0 chr17 85072438 85072490 -10200161 - Tigger5 DNA MER2_type -60 2346 2295 1 1234 381 347 107 0 chr17 85072530 85072651 -10200000 - Tigger5 DNA MER2_type -2232 174 41 1 1234 282 116 0 0 chr17 85073865 85073908 -10198743 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 1 1234 410 145 0 136 chr17 85074136 85074242 -10198409 - B3 SINE B2 -108 90 1 1 1234 493 254 80 60 chr17 85075974 85076125 -10196526 + RSINE1 SINE B4 12 165 0 1 1234 922 154 0 0 chr17 85076169 85076318 -10196333 + B1_Mur4 SINE Alu 2 150 0 1 1234 270 94 0 45 chr17 85076330 85076397 -10196254 + (CAAA)n Simple_repeat Simple_repeat 1 64 0 1 1234 242 224 179 0 chr17 85076584 85076651 -10196000 + MER5A1 DNA MER1_type 88 166 0 1 1234 270 250 29 0 chr17 85077556 85077624 -10195027 + GA-rich Low_complexity Low_complexity 2 71 0 1 1234 186 118 0 0 chr17 85077767 85077801 -10194850 + (TCTG)n Simple_repeat Simple_repeat 3 36 0 1 1234 848 248 65 48 chr17 85078032 85078258 -10194393 + B4A SINE B4 2 231 -61 1 1234 576 209 17 9 chr17 85078258 85078374 -10194277 + B1_Mur1 SINE Alu 1 117 -32 1 1234 1197 41 0 0 chr17 85078375 85078522 -10194129 + (GAAA)n Simple_repeat Simple_repeat 1 147 0 1 1234 216 0 0 0 chr17 85078547 85078571 -10194080 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1234 430 331 0 50 chr17 85078770 85078910 -10193741 + ORR1E LTR MaLR 1 133 -226 1 1234 382 313 71 48 chr17 85078945 85079203 -10193448 + ORR1E LTR MaLR 86 362 -17 1 1234 308 305 28 84 chr17 85079216 85079359 -10193292 + MLT1A0 LTR MaLR 227 361 -4 1 1234 436 201 6 11 chr17 85079534 85079715 -10192936 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1234 416 157 81 81 chr17 85080689 85080800 -10191851 + Lx4B LINE L1 6615 6725 -333 1 1234 541 113 17 35 chr17 85080849 85081014 -10191637 + GA-rich Low_complexity Low_complexity 1 162 0 1 1234 258 239 84 0 chr17 85081021 85081092 -10191559 + ID4 SINE ID 1 77 -6 1 1234 205 162 0 0 chr17 85083077 85083114 -10189537 + (CAGA)n Simple_repeat Simple_repeat 3 39 0 1 1234 267 224 14 29 chr17 85083257 85083326 -10189325 + CT-rich Low_complexity Low_complexity 2 69 0 1 1234 281 300 29 29 chr17 85084082 85084185 -10188466 - MER115 DNA Tip100 -2 691 589 1 1234 342 0 0 0 chr17 85085403 85085441 -10187210 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1234 321 205 66 150 chr17 85085522 85085631 -10187020 + L1MA5 LINE L1 6031 6118 -182 1 1234 839 233 69 0 chr17 85085631 85085833 -10186818 + B3 SINE B2 1 216 0 1 1234 321 202 65 172 chr17 85085833 85085952 -10186699 + L1MA5 LINE L1 6119 6240 -60 1 1234 202 204 29 19 chr17 85086312 85086417 -10186234 + (TA)n Simple_repeat Simple_repeat 2 107 0 1 1234 570 253 157 13 chr17 85086485 85086680 -10185971 + B4A SINE B4 1 236 -56 1 1234 355 223 97 18 chr17 85086789 85086903 -10185748 - L1MC4a LINE L1 -73 7809 7687 1 1234 947 86 62 0 chr17 85086912 85087218 -10185433 + (TCTA)n Simple_repeat Simple_repeat 1 325 0 1 1234 368 329 85 18 chr17 85087454 85087618 -10185033 + MIRb SINE MIR 71 245 -23 1 1234 256 333 12 12 chr17 85088127 85088209 -10184442 + MIRb SINE MIR 8 89 -179 1 1234 24 0 0 0 chr17 85089384 85089408 -10183243 + AT_rich Low_complexity Low_complexity 1 24 0 1 1234 183 42 0 0 chr17 85089728 85089752 -10182899 + (TC)n Simple_repeat Simple_repeat 1 24 0 1 1234 759 189 6 51 chr17 85090052 85090208 -10182443 + B1_Mur2 SINE Alu 1 149 0 1 1234 215 95 9 104 chr17 85090412 85090518 -10182133 + (TTTG)n Simple_repeat Simple_repeat 1 96 0 1 1234 821 129 14 28 chr17 85090518 85090661 -10181990 - B1_Mur4 SINE Alu -1 149 9 1 1234 294 224 0 194 chr17 85090561 85090705 -10181946 - MT2B LTR ERVL -344 257 142 1 1234 23 0 0 0 chr17 85091506 85091529 -10181122 + GC_rich Low_complexity Low_complexity 1 23 0 1 1234 453 36 0 0 chr17 85092649 85092704 -10179947 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1234 420 20 0 0 chr17 85093652 85093701 -10178950 + (TCCC)n Simple_repeat Simple_repeat 3 51 0 1 1234 196 77 25 25 chr17 85094117 85094157 -10178494 + (GGGTG)n Simple_repeat Simple_repeat 3 42 0 1 1234 380 72 0 18 chr17 85094667 85094683 -10177968 + (TC)n Simple_repeat Simple_repeat 1 16 0 1 1234 1006 102 11 17 chr17 85094683 85094862 -10177789 + (TCC)n Simple_repeat Simple_repeat 2 179 0 1 1234 380 72 0 18 chr17 85094862 85094902 -10177749 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 1234 233 400 0 0 chr17 85095837 85095912 -10176739 - ID4_ SINE ID -8 75 1 1 1234 187 265 20 0 chr17 85096337 85096386 -10176265 - MIRc SINE MIR -143 125 76 1 1234 327 311 107 39 chr17 85099432 85099666 -10172985 - L1MC4 LINE L1 -503 7539 7290 1 1234 419 326 51 84 chr17 85099716 85099859 -10172792 - L1MC4 LINE L1 -980 7062 6916 1 1234 1190 55 0 20 chr17 85099859 85100008 -10172643 - B1_Mus1 SINE Alu 0 148 3 1 1234 419 326 51 84 chr17 85100008 85100256 -10172395 - L1MC4 LINE L1 -1127 6915 6684 1 1234 21 0 0 0 chr17 85101190 85101211 -10171440 + AT_rich Low_complexity Low_complexity 1 21 0 1 1234 539 225 63 0 chr17 85103014 85103125 -10169526 - PB1D9 SINE Alu 0 120 3 1 1234 751 202 63 108 chr17 85103147 85103369 -10169282 - B3 SINE B2 -3 213 2 1 1234 491 209 24 120 chr17 85103733 85103858 -10168793 - B1_Mus2 SINE Alu -2 115 3 1 1234 420 224 14 126 chr17 85103858 85103899 -10168752 - MT2B LTR ERVL -445 156 132 1 1234 21 0 0 0 chr17 85104556 85104577 -10168074 + AT_rich Low_complexity Low_complexity 1 21 0 1 1234 471 112 0 0 chr17 85104660 85104740 -10167911 + (CA)n Simple_repeat Simple_repeat 1 80 0 1 1234 447 19 0 0 chr17 85107255 85107307 -10165344 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1234 1411 90 21 0 chr17 85110564 85110752 -10161899 + B2_Mm2 SINE B2 2 193 -2 1 1234 26 30 0 0 chr17 85110825 85110858 -10161793 + AT_rich Low_complexity Low_complexity 1 33 0 1 1234 432 251 64 37 chr17 85110916 85111105 -10161546 - B2_Mm2 SINE B2 -11 182 1 1 1234 332 309 36 0 chr17 85111302 85111386 -10161265 - B1F SINE Alu -52 97 11 1 1234 230 323 16 0 chr17 85111525 85111587 -10161064 - ID2 SINE ID -9 74 12 1 1234 23 0 0 0 chr17 85112323 85112346 -10160305 + AT_rich Low_complexity Low_complexity 1 23 0 1 1234 1087 103 0 0 chr17 85112406 85112552 -10160099 + B1_Mus2 SINE Alu 2 147 0 1 1234 908 155 242 0 chr17 85112673 85112834 -10159817 - B3 SINE B2 -15 201 2 1 1234 24 0 0 0 chr17 85113377 85113401 -10159250 + GC_rich Low_complexity Low_complexity 1 24 0 1 1234 348 225 69 43 chr17 85114683 85114799 -10157852 - PB1D7 SINE Alu -1 119 1 1 1234 326 61 20 0 chr17 85116393 85116442 -10156209 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 1234 484 181 60 0 chr17 85117260 85117376 -10155275 + B1_Mur4 SINE Alu 2 124 -26 2 1234 549 62 0 24 chr17 85117379 85117462 -10155189 + B1_Mur3 SINE Alu 69 149 0 2 1234 896 96 0 29 chr17 85117933 85118073 -10154578 - B2_Mm1t SINE B2 -8 185 50 2 1234 411 149 0 0 chr17 85118655 85118729 -10153922 + (GGA)n Simple_repeat Simple_repeat 2 75 0 2 1234 285 273 195 114 chr17 85118826 85118975 -10153676 - RSINE1 SINE B4 0 165 5 2 1234 447 182 114 0 chr17 85119124 85119212 -10153439 - B1_Mur3 SINE Alu -42 107 10 2 1234 2121 164 65 0 chr17 85119297 85119682 -10152969 - MTC LTR MaLR -9 412 3 2 1234 2867 81 6 103 chr17 85119759 85120225 -10152426 - BGLII LTR ERVK 0 421 1 2 1234 542 282 148 14 chr17 85120270 85120615 -10152036 + L1MA10 LINE L1 5920 6310 -24 2 1234 351 230 247 3 chr17 85121236 85121408 -10151243 - B4A SINE B4 -48 244 1 2 1234 403 236 65 19 chr17 85121824 85121932 -10150719 + PB1D10 SINE Alu 3 115 -2 2 1234 1269 110 10 5 chr17 85123861 85124053 -10148598 + B2_Mm2 SINE B2 3 195 0 2 1234 294 259 24 118 chr17 85124444 85124571 -10148080 + PB1D7 SINE Alu 1 115 -5 2 1234 953 111 20 14 chr17 85125273 85125419 -10147232 - B1_Mus1 SINE Alu 0 148 2 2 1234 510 170 264 0 chr17 85127073 85127179 -10145472 - B1_Mus2 SINE Alu -11 136 3 2 1234 25 0 0 0 chr17 85127253 85127278 -10145373 + AT_rich Low_complexity Low_complexity 1 25 0 2 1234 789 132 23 0 chr17 85127627 85127756 -10144895 + B1_Mus1 SINE Alu 16 147 -1 2 1234 260 251 222 28 chr17 85128048 85128224 -10144427 + L1MC3 LINE L1 6764 7012 -870 2 1234 216 0 0 0 chr17 85128277 85128301 -10144350 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 1234 254 306 9 27 chr17 85128706 85128817 -10143834 + PB1D9 SINE Alu 2 110 -10 2 1234 282 269 0 0 chr17 85129741 85129808 -10142843 + (TG)n Simple_repeat Simple_repeat 1 67 0 2 1234 265 273 91 0 chr17 85129837 85129914 -10142737 - MER57A-int LTR ERV1 -295 5892 5809 2 1234 207 0 0 0 chr17 85131256 85131279 -10141372 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1234 458 233 8 48 chr17 85132285 85132411 -10140240 - PB1 SINE Alu -5 122 2 2 1234 315 0 0 0 chr17 85134807 85134842 -10137809 + (TGG)n Simple_repeat Simple_repeat 2 36 0 2 1234 299 95 54 0 chr17 85135897 85135971 -10136680 + (TA)n Simple_repeat Simple_repeat 2 79 0 2 1234 551 85 12 0 chr17 85136399 85136481 -10136170 + (TC)n Simple_repeat Simple_repeat 1 83 0 2 1234 690 243 191 0 chr17 85137026 85137261 -10135390 - B4A SINE B4 -12 280 1 2 1234 289 260 167 29 chr17 85137967 85138177 -10134474 + RMER20B LTR ERVK 181 419 -208 2 1234 422 116 244 0 chr17 85138333 85138419 -10134232 + PB1D9 SINE Alu 1 107 -13 2 1234 342 0 0 0 chr17 85138423 85138461 -10134190 + (CAA)n Simple_repeat Simple_repeat 2 39 0 2 1234 1305 121 21 0 chr17 85140651 85140841 -10131810 - B2_Mm2 SINE B2 0 195 2 2 1234 530 161 6 0 chr17 85140950 85141099 -10131552 + CT-rich Low_complexity Low_complexity 1 149 0 2 1234 1070 75 7 14 chr17 85141099 85141247 -10131404 - B1_Mm SINE Alu 0 147 1 2 1234 530 161 8 0 chr17 85141247 85141259 -10131392 + polypyrimidine Low_complexity Low_complexity 3 14 0 2 1234 345 172 486 7 chr17 85141458 85141604 -10131047 + B3 SINE B2 1 216 0 2 1234 270 0 0 0 chr17 85143184 85143214 -10129437 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 1234 399 41 0 0 chr17 85143214 85143262 -10129389 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1234 189 0 0 0 chr17 85146400 85146421 -10126230 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1234 486 0 0 0 chr17 85146421 85146474 -10126177 + (GA)n Simple_repeat Simple_repeat 2 55 0 2 1234 467 193 43 60 chr17 85147806 85147922 -10124729 - PB1D9 SINE Alu -6 114 1 2 1234 628 265 7 0 chr17 85147925 85148072 -10124579 - B1F1 SINE Alu 0 149 2 2 1234 495 0 0 0 chr17 85154074 85154129 -10118522 + (CACCC)n Simple_repeat Simple_repeat 4 58 0 2 1234 22 0 0 0 chr17 85154164 85154186 -10118465 + AT_rich Low_complexity Low_complexity 1 22 0 2 1234 21 57 0 0 chr17 85155676 85155711 -10116940 + AT_rich Low_complexity Low_complexity 1 35 0 2 1234 251 275 179 46 chr17 85156051 85156314 -10116337 + L1MC4 LINE L1 7546 7843 -199 2 1234 1282 73 96 6 chr17 85156670 85156848 -10115803 + B2_Mm2 SINE B2 2 195 0 2 1234 440 266 25 43 chr17 85157943 85158104 -10114547 - ID_B1 SINE B4 -53 171 14 2 1234 403 263 53 0 chr17 85158490 85158604 -10114047 + ID_B1 SINE B4 85 204 -20 2 1234 244 232 43 0 chr17 85158788 85158857 -10113794 + MTC LTR MaLR 1 72 -349 2 1234 1076 68 0 0 chr17 85158863 85159010 -10113641 - B2_Mm2 SINE B2 -47 148 2 2 1234 325 357 91 0 chr17 85159811 85159954 -10112697 - RSINE1 SINE B4 -1 164 9 2 1234 219 69 0 0 chr17 85159957 85159986 -10112665 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 1234 389 283 229 0 chr17 85160014 85160180 -10112471 - B4 SINE B4 -5 287 84 2 1234 219 266 38 12 chr17 85160213 85160293 -10112358 - RSINE1 SINE B4 -72 93 12 2 1234 1432 59 26 21 chr17 85160309 85160500 -10112151 + B2_Mm1t SINE B2 1 192 -1 2 1234 1062 55 0 7 chr17 85162669 85162816 -10109835 + B2_Mm2 SINE B2 1 146 -49 2 1234 346 225 86 12 chr17 85163201 85163282 -10109369 + B1_Mur4 SINE Alu 2 88 -62 2 1234 465 99 115 65 chr17 85164036 85164151 -10108500 + B1_Mur3 SINE Alu 2 114 -6 2 1234 279 0 0 0 chr17 85164151 85164182 -10108469 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1234 790 206 147 0 chr17 85164376 85164560 -10108091 - B3 SINE B2 -5 211 1 2 1234 22 56 0 0 chr17 85164735 85164771 -10107880 + AT_rich Low_complexity Low_complexity 1 36 0 2 1234 613 212 181 16 chr17 85165756 85165938 -10106713 - B3 SINE B2 0 216 5 2 1234 508 217 133 0 chr17 85166782 85166902 -10105749 - B1_Mur1 SINE Alu -12 137 2 2 1234 222 62 0 0 chr17 85170496 85170528 -10102123 + (T)n Simple_repeat Simple_repeat 1 32 0 2 1234 1258 41 0 0 chr17 85170531 85170678 -10101973 - B1_Mus1 SINE Alu 0 148 2 2 1234 245 89 22 0 chr17 85172285 85172330 -10100321 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1234 849 153 29 0 chr17 85172837 85172974 -10099677 + B2_Mm2 SINE B2 5 145 -50 2 1234 198 0 0 0 chr17 85172993 85173015 -10099636 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 2 1234 22 0 0 0 chr17 85173095 85173117 -10099534 + AT_rich Low_complexity Low_complexity 1 22 0 2 1234 21 0 0 0 chr17 85173564 85173585 -10099066 + AT_rich Low_complexity Low_complexity 1 21 0 2 1234 552 218 88 35 chr17 85173743 85173857 -10098794 - B1_Mur4 SINE Alu 0 120 1 2 1234 321 247 0 141 chr17 85173771 85173870 -10098781 - MT2B LTR ERVL -361 240 156 2 1234 266 269 127 55 chr17 85173884 85173994 -10098657 + PB1D9 SINE Alu 1 118 -2 2 1234 1090 68 166 0 chr17 85174472 85174635 -10098016 + B2_Mm2 SINE B2 2 191 -4 2 1234 1452 59 27 0 chr17 85175149 85175335 -10097316 - B2_Mm1a SINE B2 0 193 3 2 1234 249 318 39 31 chr17 85175481 85175611 -10097040 + L1MB8 LINE L1 5892 6022 -156 2 1234 720 64 0 0 chr17 85176628 85176722 -10095929 + (TCTCCC)n Simple_repeat Simple_repeat 3 96 0 2 1234 315 0 0 0 chr17 85176723 85176758 -10095893 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1234 741 216 131 20 chr17 85177168 85177366 -10095285 - ID_B1 SINE B4 0 224 5 2 1234 1409 223 63 40 chr17 85178320 85178670 -10093981 - Lx5 LINE L1 -17 7033 6676 2 1234 207 171 0 0 chr17 85179186 85179221 -10093430 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 2 1234 2416 127 56 8 chr17 85179382 85179772 -10092879 + MTC LTR MaLR 5 413 -8 2 1234 449 271 176 12 chr17 85179861 85180210 -10092441 - L1MC2 LINE L1 -266 6078 5668 2 1234 1236 34 7 0 chr17 85180210 85180356 -10092295 + B1_Mus2 SINE Alu 1 147 0 2 1234 304 343 69 16 chr17 85180385 85180690 -10091961 - L1MC2 LINE L1 -747 5597 5277 2 1234 281 259 49 12 chr17 85181729 85181811 -10090840 + ID_B1 SINE B4 87 171 -53 2 1234 1001 228 222 10 chr17 85181920 85182213 -10090438 + ORR1D2 LTR MaLR 9 363 -7 2 1234 641 250 0 32 chr17 85182965 85183122 -10089529 + RSINE1 SINE B4 4 155 -10 2 1234 546 236 97 8 chr17 85183137 85183261 -10089390 + B1_Mur1 SINE Alu 7 141 -8 2 1234 587 261 20 86 chr17 85183295 85183492 -10089159 + B3A SINE B2 2 185 -13 2 1234 270 211 0 0 chr17 85183492 85183596 -10089055 + (CA)n Simple_repeat Simple_repeat 1 104 0 2 1234 280 319 74 25 chr17 85183596 85183718 -10088933 + MLT1A1 LTR MaLR 249 376 -32 2 1234 739 167 206 12 chr17 85183755 85183925 -10088726 + B3 SINE B2 8 210 -6 2 1234 923 170 114 26 chr17 85184168 85184361 -10088290 + B3 SINE B2 2 211 -5 2 1234 400 200 224 30 chr17 85184959 85185093 -10087558 + RSINE1 SINE B4 2 161 -4 2 1234 349 231 11 50 chr17 85185860 85186042 -10086609 + (CACAG)n Simple_repeat Simple_repeat 3 177 0 2 1234 432 219 267 0 chr17 85187353 85187499 -10085152 + B3A SINE B2 1 185 -13 2 1234 441 226 18 70 chr17 85187532 85187646 -10085005 + PB1D9 SINE Alu 13 120 0 2 1234 489 227 50 8 chr17 85188050 85188170 -10084481 - RSINE1 SINE B4 -36 129 5 2 1234 23 0 0 0 chr17 85189795 85189818 -10082833 + GC_rich Low_complexity Low_complexity 1 23 0 2 1234 345 240 0 62 chr17 85191014 85191094 -10081557 - L2a LINE L2 0 3426 3352 3 1234 383 271 143 12 chr17 85191187 85191355 -10081296 + MT2A LTR ERVL 1 190 -343 3 1234 783 192 6 25 chr17 85191363 85191523 -10081128 - B3 SINE B2 -2 214 58 3 1234 292 266 126 50 chr17 85191666 85191785 -10080866 + MTEa LTR MaLR 1 128 -251 3 1234 580 117 39 21 chr17 85191793 85192135 -10080516 + (TG)n Simple_repeat Simple_repeat 1 348 0 3 1234 783 209 124 22 chr17 85192135 85192360 -10080291 + MTEa LTR MaLR 125 372 -7 3 1234 255 329 71 0 chr17 85192394 85192479 -10080172 - ORR1E LTR MaLR 0 359 269 3 1234 1739 89 4 35 chr17 85192549 85192805 -10079846 - ORR1A1 LTR MaLR -1 345 98 3 1234 286 60 51 15 chr17 85193301 85193368 -10079283 - ORR1A1 LTR MaLR -294 73 10 3 1234 527 293 21 67 chr17 85193375 85193462 -10079189 - ORR1E LTR MaLR -167 192 110 3 1234 1241 179 14 0 chr17 85193462 85193685 -10078966 - URR1A DNA MER1_type 0 226 1 3 1234 527 293 21 67 chr17 85193685 85193791 -10078860 - ORR1E LTR MaLR -250 109 8 3 1234 284 299 52 0 chr17 85193796 85193873 -10078778 - MTE-int LTR MaLR -53 1527 1447 3 1234 1713 229 96 21 chr17 85193911 85194379 -10078272 + RMER20A LTR ERVK 14 516 0 3 1234 891 270 44 48 chr17 85194379 85194641 -10078010 - MTE-int LTR MaLR -191 1389 1129 3 1234 231 213 0 21 chr17 85194656 85194704 -10077947 + GA-rich Low_complexity Low_complexity 1 47 0 3 1234 898 260 63 37 chr17 85195002 85195317 -10077334 + MTD LTR MaLR 5 326 -53 3 1234 9313 88 17 0 chr17 85195317 85196530 -10076121 - MERVL-int LTR ERVL -808 4677 3444 3 154 22746 98 23 23 chr17 85196539 85198142 -10074509 - MERVL-int LTR ERVL -2232 3253 1619 3 1235 3819 25 5 2 chr17 85198142 85198577 -10074074 + RLTR10C LTR ERVK 1 436 0 3 1235 22746 98 23 23 chr17 85198577 85200227 -10072424 - MERVL-int LTR ERVL -3867 1618 1 3 1235 4344 95 7 0 chr17 85200230 85200807 -10071844 - MT2B2 LTR ERVL -2 582 2 3 1235 243 191 64 0 chr17 85201124 85201171 -10071480 + ID_B1 SINE B4 175 224 0 3 1235 255 173 39 0 chr17 85201171 85201223 -10071428 + GA-rich Low_complexity Low_complexity 2 55 0 3 1235 409 196 28 0 chr17 85201223 85201297 -10071354 + A-rich Low_complexity Low_complexity 5 79 0 3 1235 1347 72 0 0 chr17 85201297 85201477 -10071174 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 3 1235 409 196 28 0 chr17 85201477 85201509 -10071142 + A-rich Low_complexity Low_complexity 80 113 0 3 1235 653 213 51 7 chr17 85201634 85201771 -10070880 - B1_Mur1 SINE Alu -4 145 3 3 1235 301 289 0 32 chr17 85201694 85201787 -10070864 - MT2B LTR ERVL -361 240 151 3 1235 761 142 95 6 chr17 85201808 85201974 -10070677 + MTC LTR MaLR 1 173 -234 3 1235 866 119 8 0 chr17 85201951 85202077 -10070574 + B1_Mus2 SINE Alu 12 138 -9 3 1235 1098 96 0 0 chr17 85202077 85202234 -10070417 + (CA)n Simple_repeat Simple_repeat 2 158 0 3 1235 1044 99 14 0 chr17 85203209 85203350 -10069301 + B1_Mus1 SINE Alu 4 146 -2 3 1235 1242 54 0 0 chr17 85203352 85203499 -10069152 + B1_Mus1 SINE Alu 2 148 0 3 1235 366 107 0 0 chr17 85203593 85203649 -10069002 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 1235 316 246 0 0 chr17 85203650 85203711 -10068940 + B4 SINE B4 20 80 -212 3 1235 315 0 0 0 chr17 85203737 85203772 -10068879 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1235 360 0 0 0 chr17 85203866 85203906 -10068745 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1235 254 241 17 0 chr17 85203944 85204002 -10068649 - ID4_ SINE ID -23 60 2 3 1235 691 233 111 10 chr17 85204405 85204613 -10068038 + RMER15 LTR ERVL 347 575 0 3 1235 200 136 24 47 chr17 85204953 85205038 -10067613 + (CAGAGA)n Simple_repeat Simple_repeat 5 87 0 3 1235 768 189 42 0 chr17 85205377 85205520 -10067131 + B1_Mur4 SINE Alu 2 150 0 3 1235 831 72 0 0 chr17 85205521 85205632 -10067019 + (GGGAGA)n Simple_repeat Simple_repeat 2 112 0 3 1235 377 82 80 18 chr17 85205633 85205745 -10066906 + (CAGAGA)n Simple_repeat Simple_repeat 2 120 0 3 1235 373 337 84 84 chr17 85205745 85206056 -10066595 + MLT1J-int LTR MaLR 1037 1347 -40 3 1235 851 272 102 51 chr17 85206218 85206308 -10066343 - B4A SINE B4 0 292 207 3 1235 729 79 0 0 chr17 85206308 85206422 -10066229 + (TC)n Simple_repeat Simple_repeat 1 114 0 3 1235 851 272 102 51 chr17 85206422 85206606 -10066045 - B4A SINE B4 -86 206 6 3 1235 555 115 316 9 chr17 85206656 85206770 -10065881 - B1_Mur3 SINE Alu 0 149 1 3 1235 623 258 24 59 chr17 85207361 85207530 -10065121 + RSINE1 SINE B4 3 165 0 3 1235 752 136 76 0 chr17 85207532 85207650 -10065001 + B1_Mur4 SINE Alu 16 142 -8 3 1235 693 236 70 35 chr17 85207784 85207927 -10064724 + B4 SINE B4 116 269 -23 3 1235 387 0 0 0 chr17 85207927 85207970 -10064681 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 1235 693 236 70 35 chr17 85207970 85207997 -10064654 + B4 SINE B4 270 292 0 3 1235 1953 96 19 130 chr17 85208672 85209042 -10063609 + ORR1A4 LTR MaLR 1 329 0 3 1235 477 47 0 0 chr17 85209653 85209717 -10062934 + (TC)n Simple_repeat Simple_repeat 2 65 0 3 1235 654 137 0 3 chr17 85209935 85210041 -10062610 - L1_Mur2 LINE L1 -768 5115 5013 3 1235 704 94 9 0 chr17 85210042 85210148 -10062503 + (TCC)n Simple_repeat Simple_repeat 3 109 0 3 1235 1521 71 13 47 chr17 85210150 85210162 -10062489 - L1_Mur2 LINE L1 -852 5025 5015 3 1235 1237 106 37 11 chr17 85210162 85210352 -10062299 - B2_Mm2 SINE B2 0 195 1 3 1235 1521 71 13 47 chr17 85210352 85210503 -10062148 - L1_Mur2 LINE L1 -863 5014 4862 3 1235 3130 56 12 20 chr17 85210503 85210906 -10061745 - MTB LTR MaLR 0 400 1 3 1235 1521 71 13 47 chr17 85210906 85210976 -10061675 - L1_Mur2 LINE L1 -1016 4861 4799 3 1235 6073 176 56 123 chr17 85210973 85211569 -10061082 + Lx5 LINE L1 5106 5747 -1303 3 1235 1264 34 0 0 chr17 85211569 85211717 -10060934 + B1_Mus1 SINE Alu 1 148 0 3 1235 6073 190 61 106 chr17 85211717 85213081 -10059570 + Lx5 LINE L1 5748 7045 -5 3 1235 236 264 56 33 chr17 85213136 85213226 -10059425 + Arthur1 DNA Tip100 1683 1774 -2173 3 1235 560 295 23 81 chr17 85215099 85215312 -10057339 + B4 SINE B4 17 214 -78 3 1235 366 308 193 34 chr17 85215871 85216167 -10056484 + L2 LINE L2 1636 1978 -1441 3 1235 432 0 0 0 chr17 85216593 85216641 -10056010 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1235 449 295 91 76 chr17 85216700 85216832 -10055819 - ID_B1 SINE B4 -10 214 81 3 1235 1210 35 7 0 chr17 85216852 85216996 -10055655 - B1_Mm SINE Alu -1 146 2 3 1235 185 276 90 22 chr17 85217003 85217092 -10055559 + L2 LINE L2 2797 2891 -528 3 1235 2068 159 16 31 chr17 85217102 85217485 -10055166 - ORR1C1 LTR MaLR 0 378 2 3 1235 196 157 54 89 chr17 85217632 85217688 -10054963 - MIRb SINE MIR -11 257 204 3 1235 967 221 139 19 chr17 85217709 85217967 -10054684 - B4A SINE B4 -3 289 1 3 1235 289 349 24 34 chr17 85217991 85218137 -10054514 - MIRb SINE MIR -91 185 36 3 1235 21 0 0 0 chr17 85218152 85218173 -10054478 + AT_rich Low_complexity Low_complexity 1 21 0 3 1235 481 282 48 21 chr17 85218173 85218318 -10054333 - B1_Mur2 SINE Alu 0 149 1 3 1235 463 335 74 35 chr17 85219113 85219342 -10053309 + MLT1A0 LTR MaLR 105 342 -23 3 1235 279 0 0 0 chr17 85219367 85219398 -10053253 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1235 1176 43 0 7 chr17 85219398 85219538 -10053113 - B1_Mus2 SINE Alu -7 140 2 3 1235 828 170 28 0 chr17 85219546 85219687 -10052964 - B1_Mur4 SINE Alu -4 146 2 3 1235 322 157 14 54 chr17 85219817 85219891 -10052760 + MLT1A0 LTR MaLR 290 360 -5 3 1235 971 89 96 0 chr17 85220270 85220405 -10052246 - B1_Mus1 SINE Alu 0 148 1 3 1235 400 277 71 21 chr17 85220611 85220751 -10051900 + RSINE1 SINE B4 3 149 -16 3 1235 486 0 0 0 chr17 85220751 85220805 -10051846 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1235 414 0 0 0 chr17 85220805 85220850 -10051801 + (GA)n Simple_repeat Simple_repeat 2 47 0 3 1235 1159 182 0 5 chr17 85220902 85221106 -10051545 - B3 SINE B2 -13 203 1 3 1235 277 286 73 52 chr17 85223208 85223304 -10049347 - L2b LINE L2 -216 3159 3062 3 1235 228 225 0 0 chr17 85223526 85223566 -10049085 + tRNA-Ala-GCY_ tRNA tRNA 2 41 -34 3 1235 441 118 0 29 chr17 85223787 85223857 -10048794 - RSINE1 SINE B4 -96 69 2 3 1235 2882 9 3 0 chr17 85224002 85224323 -10048328 - RLTRETN_Mm LTR ERVK 0 322 1 3 1235 447 220 63 7 chr17 85224471 85224588 -10048063 + B3A SINE B2 1 120 -75 3 1235 1081 66 0 14 chr17 85225084 85225222 -10047429 + B1_Mus2 SINE Alu 3 138 -9 3 1235 284 0 28 0 chr17 85225222 85225258 -10047393 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 3 1235 238 295 86 47 chr17 85225372 85225500 -10047151 - MLT1A0 LTR MaLR -214 151 19 3 1235 756 233 5 32 chr17 85225776 85225962 -10046689 + B3A SINE B2 3 183 -15 3 1235 198 0 0 0 chr17 85226003 85226025 -10046626 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 3 1235 205 239 14 82 chr17 85226519 85226592 -10046059 + MIRc SINE MIR 134 201 -67 3 1235 280 336 14 56 chr17 85227293 85227435 -10045216 + MIRb SINE MIR 38 173 -95 3 1235 543 299 52 0 chr17 85227540 85227694 -10044957 + B4A SINE B4 5 166 -126 3 1235 438 308 124 34 chr17 85227734 85227912 -10044739 - MT2A LTR ERVL -106 427 234 3 1235 625 234 130 28 chr17 85227899 85228151 -10044500 - MT2A LTR ERVL -83 501 99 3 1235 498 108 0 0 chr17 85228177 85228251 -10044400 + (TCCC)n Simple_repeat Simple_repeat 3 76 0 3 1235 773 168 29 14 chr17 85228253 85228279 -10044372 - B1_Mur3 SINE Alu 0 149 9 3 1235 372 266 200 65 chr17 85228279 85228392 -10044259 - MT2A LTR ERVL -323 278 146 3 1235 1652 37 0 0 chr17 85228392 85228582 -10044069 + B2_Mm1a SINE B2 1 190 -3 3 1235 522 228 38 20 chr17 85228582 85228713 -10043938 - MT2A LTR ERVL -456 145 1 3 1235 436 267 38 0 chr17 85228724 85228829 -10043822 + B4A SINE B4 182 290 -2 3 1235 233 250 0 16 chr17 85228849 85228910 -10043741 + (CATA)n Simple_repeat Simple_repeat 3 62 0 3 1235 655 306 29 54 chr17 85228937 85229179 -10043472 + B4 SINE B4 9 244 -48 3 1235 249 394 11 0 chr17 85229154 85229248 -10043403 + B4 SINE B4 182 276 -16 3 1235 415 206 48 1 chr17 85229313 85229425 -10043226 + PB1D10 SINE Alu 1 119 -1 3 1235 194 245 40 20 chr17 85229703 85229753 -10042898 - MIR SINE MIR -206 56 6 3 1235 441 251 27 3 chr17 85229786 85229901 -10042750 + B1F2 SINE Alu 2 126 -1 3 1235 223 230 101 101 chr17 85230415 85230526 -10042125 - MIR SINE MIR -100 108 2 3 1235 358 264 88 103 chr17 85230748 85231108 -10041543 + MLT1A1 LTR MaLR 2 405 -3 3 1235 768 242 13 0 chr17 85231221 85231374 -10041277 + B3A SINE B2 3 157 -41 4 1235 219 186 0 0 chr17 85231408 85231451 -10041200 + GA-rich Low_complexity Low_complexity 4 46 0 4 1235 420 20 0 0 chr17 85232916 85232965 -10039686 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 1235 317 268 10 20 chr17 85233662 85233761 -10038890 + GA-rich Low_complexity Low_complexity 4 101 0 4 1235 23 0 0 0 chr17 85233818 85233841 -10038810 + AT_rich Low_complexity Low_complexity 1 23 0 4 1235 427 220 202 8 chr17 85233984 85234012 -10038639 + B1F1 SINE Alu 7 148 -1 4 1235 533 187 0 0 chr17 85234012 85234103 -10038548 + ID_B1 SINE B4 133 223 -1 4 1235 448 273 57 14 chr17 85234103 85234244 -10038407 + RSINE1 SINE B4 5 151 -14 4 1235 289 234 77 13 chr17 85234254 85234332 -10038319 - MER53 DNA hAT -85 108 26 4 1235 867 273 68 34 chr17 85234596 85234967 -10037684 - MTD LTR MaLR -14 407 1 4 1235 376 253 11 0 chr17 85235221 85235312 -10037339 + RSINE1 SINE B4 9 100 -65 4 1235 326 266 0 0 chr17 85235488 85235552 -10037099 - ID4_ SINE ID -3 80 17 4 1235 277 266 0 0 chr17 85235495 85235559 -10037092 - tRNA-Ala-GCY_ tRNA tRNA -8 67 4 4 1235 228 218 38 25 chr17 85235672 85235752 -10036899 + (TA)n Simple_repeat Simple_repeat 2 82 0 4 1235 342 0 0 0 chr17 85235757 85235795 -10036856 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1235 464 210 120 95 chr17 85235798 85235956 -10036695 - ID_B1 SINE B4 -22 202 41 4 1235 311 321 29 29 chr17 85236225 85236334 -10036317 - B3A SINE B2 -13 203 85 4 1235 279 309 97 71 chr17 85237789 85238057 -10034594 + B4A SINE B4 1 275 -17 4 1235 534 43 0 0 chr17 85238071 85238140 -10034511 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 1235 488 258 117 47 chr17 85238141 85238397 -10034254 - MT2A LTR ERVL -257 276 3 4 1235 371 259 83 69 chr17 85238397 85238528 -10034123 + MLT1B LTR MaLR 239 371 -19 4 1235 22 0 0 0 chr17 85238984 85239006 -10033645 + GC_rich Low_complexity Low_complexity 1 22 0 4 1235 1650 210 186 123 chr17 85239230 85239354 -10033297 + RMER19C LTR ERVK 1 203 -408 4 1235 1244 54 0 0 chr17 85239354 85239501 -10033150 + B1_Mus2 SINE Alu 1 147 0 4 1235 1650 210 186 123 chr17 85239501 85239951 -10032700 + RMER19C LTR ERVK 204 611 0 4 1235 6608 88 4 94 chr17 85240181 85241092 -10031559 + L1VL2 LINE L1 67 970 -5365 4 1235 1299 111 26 10 chr17 85241092 85241253 -10031398 + B2_Mm2 SINE B2 1 161 -34 4 1235 369 0 0 0 chr17 85241253 85241294 -10031357 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 4 1235 1299 111 26 10 chr17 85241294 85241324 -10031327 + B2_Mm2 SINE B2 162 195 0 4 1235 6608 76 22 13 chr17 85241324 85242241 -10030410 + L1VL2 LINE L1 943 1813 -1802 4 1235 220 280 0 0 chr17 85242404 85242454 -10030197 - PB1D10 SINE Alu -41 76 27 4 1235 786 274 62 0 chr17 85243170 85243378 -10029273 + ID_B1 SINE B4 2 222 -2 4 1235 447 319 0 42 chr17 85243384 85243502 -10029149 + B1F2 SINE Alu 1 113 -36 4 1235 1253 178 14 5 chr17 85243531 85243745 -10028906 + B3 SINE B2 1 216 0 4 1235 29 0 0 0 chr17 85243782 85243811 -10028840 + AT_rich Low_complexity Low_complexity 1 29 0 4 1235 225 296 40 10 chr17 85243997 85244096 -10028555 + L3 LINE CR1 4066 4167 -322 4 1235 316 222 0 0 chr17 85244606 85244669 -10027982 - ID4_ SINE ID -12 71 9 4 1235 620 114 11 0 chr17 85245381 85245469 -10027182 - B1_Mus2 SINE Alu 0 147 59 4 1235 602 245 84 11 chr17 85245503 85245693 -10026958 - B3 SINE B2 -11 205 2 4 1235 440 254 25 25 chr17 85245764 85245885 -10026766 + RSINE1 SINE B4 25 145 -20 4 1235 193 367 38 30 chr17 85245956 85246088 -10026563 + L2 LINE L2 2645 2777 -642 4 1235 1331 73 50 0 chr17 85246253 85246432 -10026219 - B2_Mm2 SINE B2 -6 189 2 4 1235 2093 158 64 30 chr17 85247220 85247613 -10025038 - MTB_Mm LTR MaLR 0 407 2 4 1235 274 183 0 40 chr17 85249144 85249218 -10023433 + T-rich Low_complexity Low_complexity 2 72 0 4 1235 857 156 21 7 chr17 85249221 85249363 -10023288 - B1F2 SINE Alu 0 149 6 4 1235 324 0 0 0 chr17 85249368 85249404 -10023247 + (TC)n Simple_repeat Simple_repeat 2 37 0 4 1235 207 0 0 0 chr17 85249404 85249426 -10023225 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1235 560 199 94 14 chr17 85249440 85249578 -10023073 - B3A SINE B2 -49 149 1 4 1235 296 297 43 21 chr17 85249772 85249865 -10022786 - MTEb LTR MaLR -7 372 278 4 1235 253 301 95 12 chr17 85250033 85250117 -10022534 - MLT1A1 LTR MaLR -311 97 7 4 1235 857 209 67 11 chr17 85250771 85250950 -10021701 - B3 SINE B2 -5 211 23 4 1235 764 176 16 0 chr17 85251050 85251175 -10021476 + B1_Mus2 SINE Alu 5 131 -16 4 1235 336 316 69 25 chr17 85251499 85251658 -10020993 + B4A SINE B4 115 280 -12 4 1235 1257 28 0 0 chr17 85252434 85252575 -10020076 + B1_Mm SINE Alu 1 141 -6 4 1235 279 0 0 0 chr17 85252577 85252608 -10020043 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 4 1235 189 0 0 0 chr17 85253026 85253047 -10019604 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1235 289 320 145 56 chr17 85253326 85253505 -10019146 + ID_B1 SINE B4 22 216 -8 4 1235 424 246 9 20 chr17 85253403 85253512 -10019139 + PB1D7 SINE Alu 13 127 0 4 1235 711 203 60 8 chr17 85253516 85253650 -10019001 + B1_Mur1 SINE Alu 2 142 -7 4 1235 786 109 0 0 chr17 85253650 85253769 -10018882 + (GGAA)n Simple_repeat Simple_repeat 3 121 0 4 1235 281 196 0 0 chr17 85253934 85253985 -10018666 + A-rich Low_complexity Low_complexity 1 51 0 4 1235 732 200 14 7 chr17 85253995 85254136 -10018515 + B1_Mur3 SINE Alu 2 143 -6 4 1235 947 150 0 7 chr17 85254145 85254286 -10018365 + B1_Mur3 SINE Alu 10 149 0 4 1235 855 201 0 0 chr17 85254317 85254496 -10018155 + GA-rich Low_complexity Low_complexity 2 180 0 4 1235 567 0 0 0 chr17 85255923 85255986 -10016665 + (GA)n Simple_repeat Simple_repeat 2 64 0 4 1235 334 304 105 64 chr17 85256162 85256334 -10016317 + MTEb LTR MaLR 1 179 -200 4 1235 2205 213 53 26 chr17 85256647 85257144 -10015507 - RCHARR1 DNA MER1_type -7 967 449 4 1235 648 259 66 0 chr17 85257144 85257341 -10015310 - B3 SINE B2 -6 210 1 4 1235 2205 213 53 26 chr17 85257341 85257388 -10015263 - RCHARR1 DNA MER1_type -526 448 408 4 1235 665 243 7 14 chr17 85257695 85257841 -10014810 + B1_Mur2 SINE Alu 2 146 -3 4 1235 501 191 87 82 chr17 85257859 85258042 -10014609 - RCHARR1 DNA MER1_type -500 474 291 4 1235 1168 169 51 14 chr17 85258105 85258321 -10014330 + URR1A DNA MER1_type 1 224 -2 4 1235 233 277 132 0 chr17 85258578 85258661 -10013990 - L1MEc LINE L1 -6182 218 125 4 1235 585 0 0 0 chr17 85258664 85258729 -10013922 + (TC)n Simple_repeat Simple_repeat 2 66 0 4 1235 252 0 0 0 chr17 85258731 85258759 -10013892 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 1235 501 17 0 0 chr17 85258759 85258816 -10013835 + (GA)n Simple_repeat Simple_repeat 1 58 0 4 1235 262 248 164 29 chr17 85258893 85258997 -10013654 + PB1D7 SINE Alu 3 120 0 4 1235 254 253 159 114 chr17 85259440 85259641 -10013010 - LTR50 LTR ERVL -584 211 2 4 1235 228 262 0 0 chr17 85260782 85260824 -10011827 + B1F SINE Alu 74 115 -34 4 1235 405 0 0 0 chr17 85260844 85260889 -10011762 + (CAAA)n Simple_repeat Simple_repeat 1 45 0 4 1235 435 301 22 22 chr17 85260958 85261094 -10011557 - B4A SINE B4 -51 241 106 4 1235 771 42 0 0 chr17 85261116 85261211 -10011440 + (TATG)n Simple_repeat Simple_repeat 2 96 0 4 1235 686 167 16 23 chr17 85261249 85261378 -10011273 - B3 SINE B2 -86 130 3 4 1235 334 308 21 32 chr17 85261381 85261475 -10011176 - B4A SINE B4 -198 94 2 4 1235 385 313 79 118 chr17 85261522 85261826 -10010825 + B4 SINE B4 1 292 0 4 1235 239 243 27 13 chr17 85261828 85261903 -10010748 + (CA)n Simple_repeat Simple_repeat 2 77 0 4 1235 351 104 0 0 chr17 85261903 85261951 -10010700 + HAL1-3A_ME LINE L1 1976 2023 -835 4 1235 244 291 59 68 chr17 85262116 85262216 -10010435 + B1_Mur4 SINE Alu 34 137 -13 4 1235 257 0 30 0 chr17 85262216 85262249 -10010402 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1235 244 291 59 68 chr17 85262249 85262266 -10010385 + B1_Mur4 SINE Alu 138 150 0 4 1235 2963 234 129 37 chr17 85262537 85263573 -10009078 - Lx8 LINE L1 -3 7470 6339 4 1235 605 208 81 89 chr17 85263574 85263815 -10008836 - RMER10A LTR ERVL 0 442 204 4 1235 1275 75 0 0 chr17 85263815 85263975 -10008676 + B2_Mm2 SINE B2 3 162 -33 4 1235 396 0 0 0 chr17 85263975 85264019 -10008632 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 4 1235 297 0 0 0 chr17 85264019 85264052 -10008599 + (GA)n Simple_repeat Simple_repeat 1 33 0 4 1235 1071 202 13 39 chr17 85264054 85264286 -10008365 - RMER10A LTR ERVL -209 233 8 4 1235 282 270 24 98 chr17 85264339 85264462 -10008189 - Lx8 LINE L1 -1178 6295 6182 4 1235 365 70 18 0 chr17 85265250 85265307 -10007344 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 1235 195 42 0 0 chr17 85265344 85265368 -10007283 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 1235 663 206 29 7 chr17 85265378 85265515 -10007136 - B1_Mur2 SINE Alu -9 140 1 4 1235 397 309 0 0 chr17 85265826 85265910 -10006741 + ID SINE ID 4 87 -137 4 1235 1067 50 65 0 chr17 85265918 85266057 -10006594 + B1_Mus1 SINE Alu 1 148 0 4 1235 532 266 35 21 chr17 85266077 85266219 -10006432 + ID_B1 SINE B4 80 223 -1 4 1235 1995 175 88 19 chr17 85266188 85266619 -10006032 - RMER5 LTR ERV1 -10 524 64 4 1235 2925 141 34 195 chr17 85266623 85267489 -10005162 + RMER6A LTR ERVK 9 734 -22 4 1235 22 35 0 0 chr17 85267561 85267590 -10005061 + AT_rich Low_complexity Low_complexity 1 29 0 4 1235 196 116 23 0 chr17 85267698 85267735 -10004916 - L2a LINE L2 0 3426 3398 4 1235 376 259 92 6 chr17 85267800 85267963 -10004688 - L1MA7 LINE L1 0 6291 6115 4 1235 383 191 588 0 chr17 85268079 85268215 -10004436 + B3 SINE B2 1 216 0 4 1235 1328 77 8 8 chr17 85268215 85268475 -10004176 + (GAAA)n Simple_repeat Simple_repeat 1 260 0 4 1235 630 186 42 0 chr17 85268483 85268601 -10004050 + B1_Mur1 SINE Alu 14 136 -13 5 1235 185 111 56 0 chr17 85268622 85268658 -10003993 + GA-rich Low_complexity Low_complexity 5 42 0 5 1235 637 238 15 30 chr17 85268809 85268943 -10003708 + RSINE1 SINE B4 4 135 -30 5 1235 1228 52 35 3 chr17 85268973 85269834 -10002817 + (TAGA)n Simple_repeat Simple_repeat 1 887 0 5 1235 437 18 35 0 chr17 85270455 85270512 -10002139 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 5 1235 1015 80 0 28 chr17 85270512 85270654 -10001997 - B1_Mus1 SINE Alu -10 138 1 5 1235 885 151 72 0 chr17 85270730 85270869 -10001782 + B1_Mur4 SINE Alu 1 149 -1 5 1235 207 0 0 0 chr17 85271271 85271294 -10001357 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 1235 234 0 0 0 chr17 85271653 85271679 -10000972 + (TC)n Simple_repeat Simple_repeat 1 26 0 5 1235 243 0 0 0 chr17 85271682 85271709 -10000942 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1235 189 176 78 0 chr17 85271807 85271858 -10000793 - MIR3 SINE MIR -43 165 111 5 1235 635 269 39 0 chr17 85272314 85272470 -10000181 + RSINE1 SINE B4 2 163 -2 5 1235 592 248 0 0 chr17 85272517 85272626 -10000025 + ID_B1 SINE B4 82 190 -34 5 1235 495 276 0 49 chr17 85272626 85272639 -10000012 + PB1D10 SINE Alu 1 116 -1 5 1235 492 277 88 0 chr17 85274144 85274292 -9998359 - ID_B1 SINE B4 -62 162 2 5 1235 448 319 18 27 chr17 85274303 85274500 -9998151 - B3A SINE B2 0 195 1 5 1235 1249 34 7 0 chr17 85274942 85275088 -9997563 + B1_Mus2 SINE Alu 1 147 0 5 1235 845 154 0 34 chr17 85275152 85275300 -9997351 + B1_Mur4 SINE Alu 7 149 -1 5 1235 399 223 29 0 chr17 85275424 85275527 -9997124 - PB1D10 SINE Alu -10 107 2 5 1235 230 261 0 0 chr17 85276062 85276108 -9996543 - PB1 SINE Alu 0 127 82 5 1235 282 271 0 40 chr17 85276155 85276212 -9996439 + polypurine Low_complexity Low_complexity 2 55 0 5 1235 461 233 116 36 chr17 85276212 85276350 -9996301 + B1F SINE Alu 1 149 0 5 1235 282 271 0 40 chr17 85276350 85276392 -9996259 + polypurine Low_complexity Low_complexity 56 97 0 5 1235 558 0 0 0 chr17 85277160 85277222 -9995429 + (TTTA)n Simple_repeat Simple_repeat 2 63 0 5 1235 284 254 44 139 chr17 85277951 85278088 -9994563 + PB1 SINE Alu 2 125 -2 5 1235 353 191 115 73 chr17 85278107 85278203 -9994448 + B1_Mur4 SINE Alu 1 100 -50 5 1235 644 280 38 59 chr17 85278214 85278431 -9994220 + ID_B1 SINE B4 1 224 -68 5 1235 233 136 44 132 chr17 85279033 85279101 -9993550 + 4.5SRNA scRNA scRNA 25 86 -8 5 1235 592 96 9 80 chr17 85279046 85279159 -9993492 + B1_Mur3 SINE Alu 43 147 -2 5 1235 186 133 0 0 chr17 85279161 85279191 -9993460 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 5 1235 513 175 0 0 chr17 85280073 85280153 -9992498 + B3 SINE B2 3 82 -134 5 1235 335 327 0 37 chr17 85280223 85280331 -9992320 + ID_B1 SINE B4 85 188 -36 5 1235 270 330 32 65 chr17 85280331 85280344 -9992307 + B1F1 SINE Alu 4 120 -29 5 1235 532 220 43 31 chr17 85280436 85280648 -9992003 + LTR33 LTR ERVL 256 509 -6 5 1235 1258 163 0 64 chr17 85280829 85281065 -9991586 + URR1B DNA MER1_type 1 221 -4 5 1235 2317 150 18 5 chr17 85281558 85281946 -9990705 - ORR1B1 LTR MaLR -1 393 1 5 1235 3107 14 0 87 chr17 85282267 85282669 -9989982 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1235 4000 95 42 30 chr17 85282671 85283372 -9989279 + IAPEz-int LTR ERVK 3 662 -5819 5 1235 460 66 0 32 chr17 85283372 85283435 -9989216 + IAPEz-int LTR ERVK 1359 1419 -5062 5 1235 1787 123 4 15 chr17 85283424 85283689 -9988962 + IAPEz-int LTR ERVK 2236 2497 -5183 5 1235 934 88 24 0 chr17 85283684 85283809 -9988842 + IAPEz-int LTR ERVK 4783 4910 -2770 5 1235 26899 15 1 0 chr17 85283809 85286762 -9985889 + IAPEz-int LTR ERVK 3525 6481 0 5 1235 3107 14 0 87 chr17 85286762 85287164 -9985487 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1235 346 338 44 37 chr17 85288473 85288608 -9984043 - Tigger5 DNA MER2_type -2168 238 103 5 1235 241 187 0 2 chr17 85288660 85288708 -9983943 + MIRc SINE MIR 109 155 -107 5 1235 457 270 0 0 chr17 85288881 85288992 -9983659 + PB1D10 SINE Alu 5 115 -2 5 1235 882 201 123 16 chr17 85289383 85289570 -9983081 - B3 SINE B2 -5 211 5 5 1235 462 36 0 0 chr17 85289638 85289694 -9982957 + (TTC)n Simple_repeat Simple_repeat 2 57 0 5 1235 288 0 0 0 chr17 85289694 85289726 -9982925 + (TTA)n Simple_repeat Simple_repeat 3 34 0 5 1235 1123 82 14 0 chr17 85289727 85289873 -9982778 - B1_Mur4 SINE Alu -1 149 2 5 1235 294 315 83 45 chr17 85290971 85291104 -9981547 + MER20 DNA MER1_type 27 164 -55 5 1235 308 207 33 99 chr17 85291108 85291199 -9981452 + MT2B LTR ERVL 157 241 -360 5 1235 463 241 9 27 chr17 85291121 85291232 -9981419 + PB1D10 SINE Alu 9 117 0 5 1235 278 273 13 13 chr17 85291231 85291309 -9981342 + MER20 DNA MER1_type 142 219 0 5 1235 1094 251 73 42 chr17 85291312 85291669 -9980982 - ORR1D2 LTR MaLR -2 368 1 5 1235 848 163 7 13 chr17 85291851 85292000 -9980651 + B1_Mus1 SINE Alu 1 148 0 5 1235 695 258 63 108 chr17 85292184 85292471 -9980180 + B4A SINE B4 3 276 -16 5 1235 360 0 0 0 chr17 85292532 85292572 -9980079 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1235 1506 190 15 83 chr17 85292602 85292676 -9979975 + MTD LTR MaLR 90 144 -275 5 1235 1998 188 14 126 chr17 85292676 85293247 -9979404 + RLTR18B LTR ERVK 4 510 -2 5 1235 1506 192 16 82 chr17 85293247 85293524 -9979127 + MTD LTR MaLR 145 405 -14 5 1235 327 167 14 43 chr17 85293562 85293631 -9979020 + HAL1-3A_ME LINE L1 1976 2042 -816 5 1235 379 240 77 0 chr17 85293670 85293774 -9978877 - PB1D10 SINE Alu 0 117 6 5 1235 432 240 61 149 chr17 85293694 85293875 -9978776 - ID_B1 SINE B4 -55 169 5 5 1235 280 133 18 37 chr17 85293876 85293985 -9978666 + T-rich Low_complexity Low_complexity 3 109 0 5 1235 1194 62 0 7 chr17 85293990 85294137 -9978514 - B1_Mus1 SINE Alu -1 147 2 5 1235 341 136 0 15 chr17 85294581 85294599 -9978052 + polypurine Low_complexity Low_complexity 3 20 0 5 1235 267 114 0 0 chr17 85294599 85294643 -9978008 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1235 341 136 0 15 chr17 85294643 85294691 -9977960 + polypurine Low_complexity Low_complexity 21 68 0 5 1235 306 292 11 53 chr17 85294780 85294874 -9977777 + RSINE1 SINE B4 61 150 -15 5 1235 227 244 208 16 chr17 85295015 85295140 -9977511 - HAL1 LINE L1 -334 2173 2025 5 1235 485 265 17 17 chr17 85295392 85295511 -9977140 + PB1 SINE Alu 1 119 -8 5 1235 544 50 0 91 chr17 85297032 85297104 -9975547 - ORR1C2 LTR MaLR 0 384 317 5 1235 1787 128 132 0 chr17 85297104 85297393 -9975258 + ORR1A2 LTR MaLR 1 327 0 5 1235 544 50 0 91 chr17 85297393 85297408 -9975243 - ORR1C2 LTR MaLR -68 316 305 5 1235 4900 152 73 17 chr17 85297410 85298077 -9974574 + RMER19B LTR ERVK 1 716 -186 5 1235 3643 67 107 30 chr17 85298077 85298601 -9974050 - LTRIS2 LTR ERV1 0 564 1 5 1235 4900 152 73 17 chr17 85298601 85298763 -9973888 + RMER19B LTR ERVK 717 877 -25 5 1235 1403 181 109 67 chr17 85298733 85298892 -9973759 - ORR1C2 LTR MaLR -39 345 175 5 1235 1428 40 0 0 chr17 85298892 85299067 -9973584 + (GGGAGA)n Simple_repeat Simple_repeat 4 178 0 5 1235 1403 181 109 67 chr17 85299067 85299238 -9973413 - ORR1C2 LTR MaLR -210 174 1 5 1235 441 0 0 0 chr17 85299406 85299455 -9973196 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 5 1235 3063 18 9 3 chr17 85299455 85299799 -9972852 - ORR1A0 LTR MaLR 0 346 1 5 1235 203 41 12 131 chr17 85299799 85299883 -9972768 + T-rich Low_complexity Low_complexity 3 76 0 5 1235 1102 52 0 0 chr17 85299883 85300018 -9972633 - B1_Mm SINE Alu 0 147 13 5 1235 514 221 81 124 chr17 85299886 85300072 -9972579 - B4 SINE B4 -69 223 46 5 1235 1145 235 123 0 chr17 85300437 85300697 -9971954 + MTD LTR MaLR 120 411 -8 5 1235 320 233 0 16 chr17 85300758 85300819 -9971832 + ID4_ SINE ID 11 70 -13 5 1235 1126 228 9 0 chr17 85301201 85301412 -9971239 + ID_B1 SINE B4 1 213 -11 5 1235 264 120 0 0 chr17 85301413 85301463 -9971188 + (TTTC)n Simple_repeat Simple_repeat 3 52 0 5 1235 357 24 0 0 chr17 85301841 85301883 -9970768 + (TCC)n Simple_repeat Simple_repeat 2 43 0 5 1235 1035 209 70 0 chr17 85302174 85302375 -9970276 + B3 SINE B2 2 216 0 5 1235 189 94 0 0 chr17 85302935 85302967 -9969684 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 5 1235 432 269 126 0 chr17 85303742 85303861 -9968790 - ID_B1 SINE B4 -9 215 82 5 1235 277 233 55 52 chr17 85304815 85304912 -9967739 - B1F2 SINE Alu 0 120 21 5 1235 3316 115 205 30 chr17 85304975 85305128 -9967523 - RLTR33 LTR ERVK -2 676 524 5 1235 1102 59 37 0 chr17 85305128 85305264 -9967387 + B1_Mm SINE Alu 1 141 -6 5 1235 221 57 29 0 chr17 85305265 85305300 -9967351 + (CAA)n Simple_repeat Simple_repeat 1 36 0 5 1235 3316 115 205 30 chr17 85305300 85305719 -9966932 - RLTR33 LTR ERVK -155 523 1 5 1235 183 363 33 74 chr17 85305947 85306069 -9966582 - L2c LINE L2 -3 3384 3268 5 1235 210 244 139 13 chr17 85307000 85307079 -9965572 + ID_B1 SINE B4 82 170 -54 5 1235 241 323 0 0 chr17 85307076 85307141 -9965510 + RSINE1 SINE B4 99 163 -2 5 1235 528 224 0 65 chr17 85307280 85307404 -9965247 - PB1D10 SINE Alu 0 117 2 5 1235 334 239 21 93 chr17 85307423 85307437 -9965214 + MT2B LTR ERVL 151 157 -444 5 1235 474 209 55 0 chr17 85307437 85307528 -9965123 + B1_Mur4 SINE Alu 2 97 -53 5 1235 631 269 27 0 chr17 85307838 85307987 -9964664 + RSINE1 SINE B4 2 154 -11 5 1235 1112 95 0 7 chr17 85308264 85308412 -9964239 + B1_Mm SINE Alu 1 147 0 5 1235 350 316 42 0 chr17 85308490 85308585 -9964066 + MLT1E3 LTR MaLR 62 160 -464 5 1235 322 286 118 34 chr17 85308668 85308864 -9963787 + MLT1E3 LTR MaLR 340 498 -126 5 1235 21 0 0 0 chr17 85308890 85308911 -9963740 + AT_rich Low_complexity Low_complexity 1 21 0 5 1235 981 0 0 0 chr17 85308922 85309031 -9963620 + (TATATG)n Simple_repeat Simple_repeat 3 111 0 5 1235 424 242 35 69 chr17 85309037 85309188 -9963463 - MTEb LTR MaLR -19 360 228 5 1235 453 182 41 0 chr17 85309281 85309402 -9963249 + (TATATG)n Simple_repeat Simple_repeat 5 130 0 5 1235 447 264 85 37 chr17 85309804 85309993 -9962658 + B3A SINE B2 1 198 0 6 1235 699 176 0 0 chr17 85310006 85310125 -9962526 - PB1D9 SINE Alu 0 120 2 6 1235 518 226 8 38 chr17 85310355 85310488 -9962163 - B3 SINE B2 -2 214 86 6 1235 560 95 0 0 chr17 85310484 85310558 -9962093 - ORR1A2 LTR MaLR -9 317 244 6 1235 1243 69 0 0 chr17 85310558 85310717 -9961934 + B2_Mm1a SINE B2 2 160 -33 6 1235 351 0 0 0 chr17 85310717 85310756 -9961895 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 6 1235 1631 92 34 71 chr17 85310757 85311026 -9961625 - ORR1A2 LTR MaLR -68 259 1 6 1235 359 297 39 10 chr17 85311026 85311120 -9961531 - B2_Mm2 SINE B2 -98 97 1 6 1235 688 218 60 19 chr17 85311298 85311484 -9961167 - B3 SINE B2 -9 186 2 6 1235 287 254 63 0 chr17 85311954 85312017 -9960634 - ID4 SINE ID -13 70 4 6 1235 438 20 0 0 chr17 85312033 85312084 -9960567 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1235 390 250 158 8 chr17 85312095 85312228 -9960423 - B4 SINE B4 -138 154 2 6 1235 249 373 59 13 chr17 85312234 85312386 -9960265 + MER5A DNA MER1_type 3 161 -28 6 1235 263 246 15 0 chr17 85312619 85312684 -9959967 + ID4_ SINE ID 1 66 -17 6 1235 552 144 246 0 chr17 85313198 85313316 -9959335 - B1_Mur4 SINE Alu -1 149 3 6 1235 340 177 34 102 chr17 85313237 85313325 -9959326 - MT2B LTR ERVL -362 239 158 6 1235 1404 87 5 0 chr17 85313462 85313646 -9959005 + B2_Mm1a SINE B2 3 187 -6 6 1235 227 320 39 0 chr17 85313728 85313806 -9958845 + MIRb SINE MIR 41 121 -147 6 1235 266 194 16 31 chr17 85314007 85314071 -9958580 + G-rich Low_complexity Low_complexity 2 64 0 6 1235 547 284 7 28 chr17 85314177 85314322 -9958329 + RSINE1 SINE B4 2 143 -22 6 1235 339 96 0 0 chr17 85314346 85314398 -9958253 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 1235 710 257 74 16 chr17 85314495 85314685 -9957966 + ID_B1 SINE B4 3 203 -21 6 1235 409 195 0 24 chr17 85314727 85314811 -9957840 + PB1 SINE Alu 41 122 -5 6 1235 558 278 99 33 chr17 85314937 85315209 -9957442 - B4A SINE B4 0 292 3 6 1235 262 289 56 0 chr17 85315533 85315623 -9957028 + MLT1J LTR MaLR 418 512 0 6 1235 819 194 192 11 chr17 85315702 85315884 -9956767 + B3 SINE B2 2 216 0 6 1235 1036 110 0 14 chr17 85316005 85316153 -9956498 - B1_Mur4 SINE Alu 0 150 5 6 1235 555 266 41 27 chr17 85316567 85316714 -9955937 + RSINE1 SINE B4 3 151 -14 6 1235 189 74 0 0 chr17 85316837 85316864 -9955787 + (T)n Simple_repeat Simple_repeat 1 27 0 6 1235 1121 50 43 0 chr17 85316864 85317005 -9955646 - B1_Mm SINE Alu 0 147 1 6 1235 650 122 9 0 chr17 85317263 85317370 -9955281 + (TA)n Simple_repeat Simple_repeat 1 108 0 6 1235 1169 69 0 0 chr17 85317449 85317588 -9955063 + B1_Mm SINE Alu 1 139 -8 6 1235 186 71 0 0 chr17 85317588 85317616 -9955035 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 6 1235 831 175 51 20 chr17 85317732 85318013 -9954638 - ORR1A4 LTR MaLR -13 381 5 6 1235 1255 218 191 17 chr17 85318018 85318539 -9954112 - RLTR17 LTR ERVK -81 611 1 6 1235 1827 199 124 102 chr17 85318540 85318698 -9953953 - RMER3D-int LTR ERVK -1 2325 2143 6 1235 1201 55 7 0 chr17 85318698 85318844 -9953807 + B1_Mm SINE Alu 1 147 0 6 1235 1440 58 32 0 chr17 85318847 85319035 -9953616 + B2_Mm2 SINE B2 2 195 0 6 1235 1827 199 124 102 chr17 85319035 85319076 -9953575 - RMER3D-int LTR ERVK -184 2142 2134 6 1235 1233 48 0 0 chr17 85319076 85319223 -9953428 + B1_Mus2 SINE Alu 1 147 0 6 1235 2201 199 124 102 chr17 85319223 85319784 -9952867 - RMER3D-int LTR ERVK -157 2685 2124 6 1235 929 212 43 69 chr17 85319789 85320114 -9952537 + RLTR31_Mur LTR ERVK 141 495 -58 6 1235 359 120 0 0 chr17 85320140 85320190 -9952461 + MTB LTR MaLR 351 400 0 6 1235 468 208 52 10 chr17 85320190 85320285 -9952366 + PB1D7 SINE Alu 20 118 -2 6 1235 318 167 19 0 chr17 85321184 85321238 -9951413 - MIRc SINE MIR -88 180 126 6 1235 225 224 0 75 chr17 85321244 85321297 -9951354 - MIRc SINE MIR -94 174 126 6 1235 22 0 0 0 chr17 85321843 85321865 -9950786 + AT_rich Low_complexity Low_complexity 1 22 0 6 1235 5885 69 9 29 chr17 85321890 85322715 -9949936 - RLTR13C2 LTR ERVK 0 1033 1 6 1235 257 277 15 15 chr17 85322715 85322758 -9949893 - B1F1 SINE Alu -75 74 32 6 1235 768 203 7 33 chr17 85322969 85323122 -9949529 + B1_Mur3 SINE Alu 1 149 0 6 1235 839 267 9 5 chr17 85323276 85323498 -9949153 - ID_B1 SINE B4 -1 223 1 6 1235 601 175 10 10 chr17 85323836 85323940 -9948711 - PB1D10 SINE Alu 0 117 14 6 1235 333 0 0 0 chr17 85324023 85324060 -9948591 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 6 1235 1092 87 0 0 chr17 85324060 85324198 -9948453 - B1_Mus2 SINE Alu -8 139 2 6 1235 621 196 6 16 chr17 85324564 85324576 -9948075 + (TG)n Simple_repeat Simple_repeat 2 12 0 6 1235 432 104 0 0 chr17 85324576 85324643 -9948008 + (TA)n Simple_repeat Simple_repeat 2 68 0 6 1235 621 196 6 16 chr17 85324643 85324812 -9947839 + (TG)n Simple_repeat Simple_repeat 1 169 0 6 1235 351 264 0 0 chr17 85324826 85324966 -9947685 + (TG)n Simple_repeat Simple_repeat 1 140 0 6 1235 573 265 70 110 chr17 85324985 85325286 -9947365 - B4 SINE B4 -2 290 2 6 1235 450 0 0 0 chr17 85325472 85325522 -9947129 + (TTCC)n Simple_repeat Simple_repeat 1 50 0 6 1235 242 268 0 35 chr17 85326168 85326226 -9946425 + MER34A LTR ERV1 130 185 -386 6 1235 225 0 0 0 chr17 85326433 85326458 -9946193 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 6 1235 1671 206 104 27 chr17 85326458 85326821 -9945830 + MTD LTR MaLR 16 407 -12 6 1235 267 156 119 83 chr17 85326844 85326928 -9945723 + MER34A1 LTR ERV1 501 587 0 6 1235 198 0 0 0 chr17 85327129 85327151 -9945500 + (GGA)n Simple_repeat Simple_repeat 2 23 0 6 1236 723 209 8 0 chr17 85328436 85328570 -9944081 + B1_Mur1 SINE Alu 1 135 -14 6 1236 306 87 0 0 chr17 85328571 85328617 -9944034 + (CAAT)n Simple_repeat Simple_repeat 1 46 0 6 1236 1127 61 0 45 chr17 85329009 85329163 -9943488 + B1_Mus1 SINE Alu 2 148 0 6 1236 589 256 21 28 chr17 85330021 85330162 -9942489 - B1_Mur1 SINE Alu -1 148 9 6 1236 600 255 150 41 chr17 85330371 85330637 -9942014 + MER67C LTR ERV1 44 338 -373 6 1236 724 206 59 16 chr17 85330650 85330837 -9941814 + MER67C LTR ERV1 515 709 -2 6 1236 2312 121 10 75 chr17 85330948 85331041 -9941610 - ORR1C1 LTR MaLR 0 378 290 6 1236 3288 56 86 131 chr17 85331041 85331577 -9941074 + RLTR1B LTR ERV1 1 512 0 6 1236 2312 121 10 75 chr17 85331577 85331885 -9940766 - ORR1C1 LTR MaLR -89 289 3 6 1236 252 143 0 0 chr17 85331916 85331958 -9940693 + (T)n Simple_repeat Simple_repeat 1 42 0 6 1236 1175 54 0 39 chr17 85331958 85332111 -9940540 - B1_Mus1 SINE Alu 0 148 2 6 1236 330 290 97 22 chr17 85332764 85332898 -9939753 - ID_B1 SINE B4 0 224 81 6 1236 250 271 0 28 chr17 85333050 85333122 -9939529 - ID2 SINE ID -13 70 1 6 1236 390 145 14 0 chr17 85333869 85333938 -9938713 - B1_Mur4 SINE Alu -6 144 75 6 1236 513 298 89 92 chr17 85334304 85334652 -9937999 + ORR1E LTR MaLR 3 349 -10 6 1236 1269 20 0 20 chr17 85334707 85334857 -9937794 + B1_Mm SINE Alu 1 147 0 6 1236 198 0 0 0 chr17 85334890 85334912 -9937739 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 6 1236 291 274 27 36 chr17 85334917 85335027 -9937624 + MER20 DNA MER1_type 106 214 -5 6 1236 600 14 0 0 chr17 85335407 85335476 -9937175 + (GA)n Simple_repeat Simple_repeat 1 69 0 6 1236 728 214 44 22 chr17 85336220 85336402 -9936249 - B3 SINE B2 -25 191 6 6 1236 279 282 26 0 chr17 85336492 85336570 -9936081 - ID4 SINE ID -2 81 2 6 1236 290 240 260 0 chr17 85336615 85336715 -9935936 + ID_B1 SINE B4 82 207 -17 6 1236 1012 129 7 7 chr17 85337089 85337237 -9935414 - B1_Mus1 SINE Alu 0 148 1 6 1236 33 73 0 0 chr17 85337354 85337422 -9935229 + AT_rich Low_complexity Low_complexity 1 68 0 6 1236 246 282 64 0 chr17 85337509 85337587 -9935064 + PB1D9 SINE Alu 6 88 -32 6 1236 642 243 27 59 chr17 85337612 85337831 -9934820 + B3 SINE B2 5 216 0 6 1236 360 250 53 9 chr17 85337845 85337958 -9934693 + PB1D9 SINE Alu 1 118 -2 6 1236 256 260 40 14 chr17 85338370 85338444 -9934207 + ID4 SINE ID 6 81 -2 6 1236 600 242 71 12 chr17 85338565 85338766 -9933885 + B3A SINE B2 1 204 -12 6 1236 402 39 0 0 chr17 85338766 85338818 -9933833 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1236 290 242 0 0 chr17 85338857 85338919 -9933732 + B1_Mur1 SINE Alu 78 139 -10 6 1236 234 0 0 0 chr17 85338919 85338945 -9933706 + (CACAA)n Simple_repeat Simple_repeat 2 27 0 6 1236 425 34 17 0 chr17 85339667 85339726 -9932925 + (TCTG)n Simple_repeat Simple_repeat 1 60 0 6 1236 405 39 0 0 chr17 85340168 85340219 -9932432 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1236 414 0 0 0 chr17 85340375 85340421 -9932230 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 6 1236 1164 76 0 0 chr17 85340421 85340565 -9932086 - B1_Mm SINE Alu -2 145 2 6 1236 278 316 54 52 chr17 85341632 85341843 -9930808 + L1M5 LINE L1 5246 5463 -777 6 1236 250 254 14 14 chr17 85342080 85342152 -9930499 + ID4 SINE ID 7 78 -5 6 1236 222 37 0 0 chr17 85342423 85342450 -9930201 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1236 1145 78 0 0 chr17 85342963 85343105 -9929546 + B1_Mus2 SINE Alu 2 143 -4 6 1236 541 308 132 0 chr17 85343129 85343311 -9929340 - ID_B1 SINE B4 -13 211 6 6 1236 380 250 40 0 chr17 85343323 85343423 -9929228 - PB1 SINE Alu -3 124 21 6 1236 373 222 22 51 chr17 85343490 85343604 -9929047 - B1_Mur1 SINE Alu -11 138 1 7 1236 806 268 76 29 chr17 85344355 85344632 -9928019 + B4A SINE B4 1 290 -2 7 1236 412 143 0 0 chr17 85344771 85344841 -9927810 + B1_Mur4 SINE Alu 37 106 -44 7 1236 339 85 0 0 chr17 85344841 85344888 -9927763 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 1236 594 74 0 0 chr17 85344961 85345042 -9927609 + B1_Mus2 SINE Alu 65 145 -2 7 1236 200 59 29 0 chr17 85345043 85345077 -9927574 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 7 1236 823 45 0 0 chr17 85346072 85346182 -9926469 - B1_Mus1 SINE Alu 0 148 39 7 1236 371 212 0 0 chr17 85346216 85346282 -9926369 - B1F SINE Alu -9 140 75 7 1236 276 211 62 62 chr17 85346787 85346883 -9925768 + PB1 SINE Alu 32 127 0 7 1236 817 264 65 48 chr17 85346953 85347263 -9925388 - MTE2a LTR MaLR -9 370 56 7 1236 209 191 24 0 chr17 85347622 85347664 -9924987 + C-rich Low_complexity Low_complexity 2 44 0 7 1236 1170 57 0 0 chr17 85347871 85348012 -9924639 - B1_Mus1 SINE Alu -5 143 3 7 1236 596 213 7 54 chr17 85348326 85348410 -9924241 - MTE2b LTR MaLR -182 197 119 7 1236 3399 44 2 24 chr17 85348410 85348826 -9923825 - MTB_Mm LTR MaLR 0 407 1 7 1236 596 213 7 54 chr17 85348826 85348890 -9923761 - MTE2b LTR MaLR -261 118 56 7 1236 217 258 70 70 chr17 85349076 85349147 -9923504 - B1F SINE Alu -77 72 2 7 1236 299 35 70 0 chr17 85349828 85349885 -9922766 + (TA)n Simple_repeat Simple_repeat 2 62 0 7 1236 719 215 96 55 chr17 85349886 85350289 -9922362 - MT2A LTR ERVL -119 482 1 7 1236 247 364 83 8 chr17 85350289 85350422 -9922229 + MER5A DNA MER1_type 24 166 -23 7 1236 2316 101 3 27 chr17 85350571 85350906 -9921745 + ORR1A2 LTR MaLR 1 327 0 7 1236 984 149 150 58 chr17 85350973 85351180 -9921471 - URR1A DNA MER1_type 0 226 1 7 1236 336 199 214 29 chr17 85351411 85351551 -9921100 - B3 SINE B2 -6 210 45 7 1236 456 279 41 0 chr17 85351766 85351888 -9920763 + B1F SINE Alu 13 139 -10 7 1236 216 0 0 0 chr17 85351926 85351950 -9920701 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1236 701 180 13 92 chr17 85351952 85352105 -9920546 - B1_Mur4 SINE Alu -9 141 1 7 1236 637 283 20 0 chr17 85352115 85352267 -9920384 - ID_B1 SINE B4 -48 176 22 7 1236 584 267 71 24 chr17 85352700 85352790 -9919861 - B4 SINE B4 -70 222 122 7 1236 297 0 0 0 chr17 85352790 85352823 -9919828 + (CA)n Simple_repeat Simple_repeat 1 33 0 7 1236 584 267 71 24 chr17 85352823 85352943 -9919708 - B4 SINE B4 -171 121 3 7 1236 2085 141 65 42 chr17 85353055 85353486 -9919165 - RMER10A LTR ERVL -1 441 1 7 1236 1208 61 0 0 chr17 85353512 85353659 -9918992 - B1_Mus1 SINE Alu 0 148 2 7 1236 414 141 0 207 chr17 85353659 85353775 -9918876 + B1_Mur4 SINE Alu 59 150 0 7 1236 1146 54 14 0 chr17 85353858 85354006 -9918645 - B1_Mur4 SINE Alu 0 150 1 7 1236 261 273 134 18 chr17 85354631 85354743 -9917908 + RSINE1 SINE B4 4 128 -37 7 1236 381 22 0 0 chr17 85354748 85354794 -9917857 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1236 240 143 35 35 chr17 85354973 85355031 -9917620 + (CCAA)n Simple_repeat Simple_repeat 2 59 0 7 1236 1416 162 148 56 chr17 85355246 85355624 -9917027 + MTC LTR MaLR 1 413 -8 7 1236 201 243 40 26 chr17 85357282 85357358 -9915293 + (CGGGG)n Simple_repeat Simple_repeat 3 79 0 7 1236 320 264 0 51 chr17 85357497 85357653 -9914998 + (CGG)n Simple_repeat Simple_repeat 2 149 0 7 1236 559 210 74 68 chr17 85359093 85359241 -9913410 - B1_Mur1 SINE Alu 0 149 1 7 1236 362 248 150 30 chr17 85359412 85359545 -9913106 - B1F1 SINE Alu 0 149 1 7 1236 570 220 23 108 chr17 85359571 85359785 -9912866 - B3 SINE B2 -1 215 20 7 1236 238 278 111 0 chr17 85360544 85360616 -9912035 + PB1D10 SINE Alu 30 109 -8 7 1236 23 54 0 0 chr17 85360760 85360797 -9911854 + AT_rich Low_complexity Low_complexity 1 37 0 7 1236 505 223 89 58 chr17 85361419 85361609 -9911042 - ID_B1 SINE B4 0 224 29 7 1236 342 0 0 0 chr17 85361723 85361761 -9910890 + (TCCC)n Simple_repeat Simple_repeat 1 38 0 7 1236 256 254 16 0 chr17 85361778 85361841 -9910810 - ID4_ SINE ID -16 67 4 7 1236 1002 137 0 7 chr17 85362024 85362171 -9910480 - B1_Mus1 SINE Alu -1 147 2 7 1236 320 247 65 0 chr17 85362318 85362395 -9910256 - ID4_ SINE ID 0 83 2 7 1236 284 144 39 118 chr17 85362544 85362646 -9910005 - B1F2 SINE Alu -16 133 40 7 1236 248 163 20 39 chr17 85362965 85363016 -9909635 + B1F SINE Alu 99 148 -1 7 1236 240 35 0 0 chr17 85363328 85363357 -9909294 + (T)n Simple_repeat Simple_repeat 1 29 0 7 1236 1153 49 14 0 chr17 85363357 85363501 -9909150 - B1_Mus2 SINE Alu 0 147 2 7 1236 258 211 12 123 chr17 85363672 85363753 -9908898 + B1_Mus1 SINE Alu 5 76 -72 7 1236 336 247 112 0 chr17 85364344 85364433 -9908218 - PB1 SINE Alu -28 99 1 7 1236 3462 111 197 25 chr17 85365621 85366266 -9906385 - RMER6A LTR ERVK 0 756 1 7 1236 626 232 91 6 chr17 85366504 85366669 -9905982 - B3 SINE B2 0 216 38 7 1236 470 231 117 8 chr17 85366694 85366909 -9905742 - Lx5 LINE L1 0 7058 6780 7 1236 271 191 0 0 chr17 85366909 85366956 -9905695 - B3 SINE B2 -168 48 2 7 1236 301 240 0 37 chr17 85367186 85367267 -9905384 - MER3 DNA MER1_type -97 112 41 7 1236 268 224 60 84 chr17 85369297 85369380 -9903271 + L1ME2 LINE L1 5841 5921 -243 7 1236 554 191 92 42 chr17 85369995 85370137 -9902514 - B1_Mur3 SINE Alu 0 149 1 7 1236 500 218 64 0 chr17 85370147 85370257 -9902394 - PB1D7 SINE Alu 0 120 4 7 1236 289 246 224 0 chr17 85370752 85370935 -9901716 - L1MC4 LINE L1 -4732 1483 1260 7 1236 1188 217 75 14 chr17 85371103 85371468 -9901183 - ETnERV2-int LTR ERVK -344 7062 6833 7 1236 536 322 47 26 chr17 85371475 85371856 -9900795 - RMER16-int LTR ERVK -300 6619 6489 7 1236 256 324 27 20 chr17 85371723 85371871 -9900780 - MMERGLN-int LTR ERV1 -336 7220 7072 7 1236 996 294 25 35 chr17 85373114 85373548 -9899103 - RMER16-int LTR ERVK -778 5389 4960 7 1236 830 258 22 43 chr17 85373532 85373901 -9898750 - RMER16-int LTR ERVK -3148 4258 4083 7 1236 2764 181 19 18 chr17 85373949 85374533 -9898118 - RMER16-int LTR ERVK -2567 2839 2305 7 1236 1612 215 27 101 chr17 85374528 85374921 -9897730 - ETnERV2-int LTR ERVK -4656 2750 2393 7 1236 1371 79 16 5 chr17 85374921 85375112 -9897539 - B2_Mm1a SINE B2 0 193 1 7 1236 1612 201 1 3 chr17 85375112 85375169 -9897482 - ETnERV2-int LTR ERVK -5014 2392 2339 7 1236 323 138 0 17 chr17 85375176 85375235 -9897416 - ETnERV2-int LTR ERVK -5001 1136 1079 7 1236 324 133 0 0 chr17 85375235 85375295 -9897356 + (T)n Simple_repeat Simple_repeat 1 60 0 7 1236 1010 58 0 0 chr17 85375295 85375432 -9897219 - B1_Mm SINE Alu 0 147 11 7 1236 890 124 22 7 chr17 85375432 85375570 -9897081 - RMER16-int LTR ERVK -4178 1228 1089 7 1236 2211 152 150 51 chr17 85375575 85376088 -9896563 - RMER16-int LTR ERVK -4587 819 256 7 1236 180 0 0 0 chr17 85376362 85376382 -9896269 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 7 1236 298 221 37 49 chr17 85376431 85376512 -9896139 - RMER16-int LTR ERVK -7948 269 190 7 1236 369 178 103 58 chr17 85376792 85376947 -9895704 - RLTR43A LTR ERVK -2 362 201 7 1236 184 93 0 65 chr17 85377218 85377264 -9895387 + T-rich Low_complexity Low_complexity 3 45 0 7 1236 25 0 0 0 chr17 85378012 85378037 -9894614 + AT_rich Low_complexity Low_complexity 1 25 0 7 1236 359 271 86 47 chr17 85378041 85378169 -9894482 + RSINE1 SINE B4 1 133 -32 7 1236 258 95 0 0 chr17 85378180 85378222 -9894429 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 1236 1410 79 21 0 chr17 85378695 85378884 -9893767 - B2_Mm1a SINE B2 0 193 1 7 1236 2331 100 22 0 chr17 85379018 85379338 -9893313 - ORR1A2 LTR MaLR 0 327 1 7 1236 3138 113 79 16 chr17 85379571 85380165 -9892486 + RMER6A LTR ERVK 69 745 -11 7 1236 241 337 42 0 chr17 85380191 85380286 -9892365 - PB1D10 SINE Alu -9 108 10 7 1236 232 279 12 25 chr17 85380856 85380937 -9891714 - L1M5 LINE L1 -374 5866 5787 7 1236 264 298 18 46 chr17 85381036 85381145 -9891506 - HAL1 LINE L1 -998 1509 1404 7 1236 270 0 0 0 chr17 85381564 85381594 -9891057 + (TATG)n Simple_repeat Simple_repeat 4 33 0 7 1236 455 274 46 51 chr17 85381672 85381868 -9890783 - B3A SINE B2 -3 195 1 7 1236 298 242 161 21 chr17 85381872 85381965 -9890686 - PB1D10 SINE Alu -1 116 11 7 1236 1559 153 177 0 chr17 85382042 85382369 -9890282 - ORR1B1 LTR MaLR -7 387 3 7 1236 677 156 80 12 chr17 85382369 85382526 -9890125 - ORR1B2 LTR MaLR -199 168 1 7 1236 363 351 6 29 chr17 85382609 85382779 -9889872 + MER2B DNA MER2_type 1 166 -170 7 1236 319 220 209 0 chr17 85382968 85383035 -9889616 - L1MA8 LINE L1 -392 5899 5814 7 1236 262 0 53 0 chr17 85383035 85383073 -9889578 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 7 1236 319 220 209 0 chr17 85383073 85383096 -9889555 - L1MA8 LINE L1 -478 5813 5791 7 1236 305 261 97 73 chr17 85383377 85383501 -9889150 - ID_B1 SINE B4 -3 221 95 7 1236 250 246 32 16 chr17 85383674 85383736 -9888915 - tRNA-Ala-GCY_ tRNA tRNA -9 66 4 7 1236 970 248 58 107 chr17 85384291 85384788 -9887863 - L1MC3 LINE L1 -158 7627 7155 7 1236 1226 34 0 0 chr17 85384988 85385135 -9887516 + B1_Mus2 SINE Alu 1 147 0 7 1236 28 0 0 0 chr17 85385236 85385264 -9887387 + AT_rich Low_complexity Low_complexity 1 28 0 7 1236 534 265 43 32 chr17 85385409 85385596 -9887055 - ID_B1 SINE B4 -34 190 2 7 1236 314 288 56 8 chr17 85385679 85385805 -9886846 - L1MD3 LINE L1 -93 7902 7771 7 1236 599 243 25 66 chr17 85385857 85386055 -9886596 + B3A SINE B2 9 198 0 7 1236 189 0 0 0 chr17 85386682 85386703 -9885948 + (TCCC)n Simple_repeat Simple_repeat 1 21 0 7 1236 594 225 78 0 chr17 85387188 85387317 -9885334 - B1_Mur2 SINE Alu -9 140 2 7 1236 391 223 126 0 chr17 85387682 85387785 -9884866 + PB1D10 SINE Alu 1 116 -1 7 1236 186 43 0 0 chr17 85387816 85387839 -9884812 + (CA)n Simple_repeat Simple_repeat 1 23 0 7 1236 819 161 304 9 chr17 85388108 85388328 -9884323 - MTD LTR MaLR -8 411 127 8 1236 646 151 42 8 chr17 85388336 85388456 -9884195 + B1_Mur2 SINE Alu 23 146 -3 8 1236 545 174 0 85 chr17 85388499 85388629 -9884022 - MTD LTR MaLR -299 120 1 8 1236 387 0 0 0 chr17 85388840 85388883 -9883768 + (TTCA)n Simple_repeat Simple_repeat 4 46 0 8 1236 215 255 110 64 chr17 85389462 85389571 -9883080 + PB1 SINE Alu 14 127 0 8 1236 219 309 52 21 chr17 85390186 85390282 -9882369 + B1F SINE Alu 2 100 -49 8 1236 688 147 0 0 chr17 85390450 85390559 -9882092 - B1_Mur1 SINE Alu 0 149 41 8 1236 288 197 0 70 chr17 85390508 85390579 -9882072 - 4.5SRNA scRNA scRNA -8 86 21 8 1236 822 158 29 0 chr17 85390697 85390836 -9881815 + B1_Mur4 SINE Alu 1 143 -7 8 1236 288 0 0 0 chr17 85390841 85390873 -9881778 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 8 1236 191 188 21 0 chr17 85391152 85391200 -9881451 + CT-rich Low_complexity Low_complexity 1 49 0 8 1236 1009 69 7 40 chr17 85391745 85391896 -9880755 + B1_Mus1 SINE Alu 2 147 -1 8 1236 418 200 150 0 chr17 85392268 85392368 -9880283 - PB1D10 SINE Alu 0 117 3 8 1236 527 248 29 29 chr17 85392425 85392562 -9880089 + B1_Mur4 SINE Alu 13 149 -1 8 1236 711 138 17 0 chr17 85392674 85392790 -9879861 + B3 SINE B2 3 120 -96 8 1236 285 77 0 1 chr17 85394616 85394657 -9877994 + PB1D9 SINE Alu 49 88 -61 8 1236 396 0 0 0 chr17 85394657 85394701 -9877950 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 1236 21 36 0 0 chr17 85395748 85395776 -9876875 + AT_rich Low_complexity Low_complexity 1 28 0 8 1236 180 111 0 0 chr17 85395782 85395809 -9876842 + (TG)n Simple_repeat Simple_repeat 1 27 0 8 1236 1763 147 125 6 chr17 85397013 85397224 -9875427 - ORR1B2 LTR MaLR 0 367 124 8 1236 297 0 0 0 chr17 85397224 85397257 -9875394 + (CA)n Simple_repeat Simple_repeat 1 33 0 8 1236 1763 147 125 6 chr17 85397257 85397373 -9875278 - ORR1B2 LTR MaLR -244 123 3 8 1236 181 318 11 22 chr17 85397439 85397529 -9875122 - MIR SINE MIR -24 238 150 8 1236 330 26 0 0 chr17 85397891 85397930 -9874721 + (TG)n Simple_repeat Simple_repeat 1 39 0 8 1236 238 278 103 71 chr17 85398590 85398745 -9873906 - RSINE1 SINE B4 -3 162 3 8 1236 198 0 0 0 chr17 85401711 85401733 -9870918 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 8 1236 686 78 212 25 chr17 85401733 85401851 -9870800 - B1_Mur4 SINE Alu -9 141 2 8 1236 25 31 0 0 chr17 85402458 85402490 -9870161 + AT_rich Low_complexity Low_complexity 1 32 0 8 1236 285 29 0 0 chr17 85402741 85402775 -9869876 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 8 1236 26 30 0 0 chr17 85402812 85402845 -9869806 + AT_rich Low_complexity Low_complexity 1 33 0 8 1236 225 302 19 111 chr17 85403338 85403446 -9869205 - MTD LTR MaLR -46 373 276 8 1236 440 291 57 6 chr17 85404000 85404176 -9868475 + B3A SINE B2 5 189 -9 8 1236 479 308 15 0 chr17 85404511 85404644 -9868007 - RSINE1 SINE B4 -28 137 3 8 1236 1301 118 16 5 chr17 85405469 85405657 -9866994 + B2_Mm2 SINE B2 1 190 -5 8 1236 231 88 0 0 chr17 85405674 85405708 -9866943 + (CA)n Simple_repeat Simple_repeat 2 35 0 8 1236 539 212 27 29 chr17 85405902 85406028 -9866623 + PB1D9 SINE Alu 6 129 -21 8 1236 314 109 0 35 chr17 85406086 85406143 -9866508 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 8 1236 1206 28 7 0 chr17 85406143 85406287 -9866364 - B1_Mus2 SINE Alu 0 147 3 8 1236 1043 139 0 6 chr17 85407172 85407353 -9865298 + (TG)n Simple_repeat Simple_repeat 1 180 0 8 1236 1095 139 0 0 chr17 85407367 85407547 -9865104 + (TG)n Simple_repeat Simple_repeat 1 180 0 8 1236 225 241 0 69 chr17 85407801 85407859 -9864792 - tRNA-Ala-GCY_ tRNA tRNA -8 67 14 8 1236 472 224 26 83 chr17 85408550 85408706 -9863945 - ID_B1 SINE B4 0 224 78 8 1236 318 318 268 0 chr17 85409378 85409598 -9863053 + B4A SINE B4 6 284 -8 8 1236 226 200 0 0 chr17 85409598 85409638 -9863013 + G-rich Low_complexity Low_complexity 1 40 0 8 1236 535 290 88 20 chr17 85409686 85409890 -9862761 + B4A SINE B4 65 282 -10 8 1236 456 289 67 30 chr17 85410043 85410207 -9862444 - B4A SINE B4 -4 288 119 8 1236 279 113 0 0 chr17 85410211 85410264 -9862387 + (GA)n Simple_repeat Simple_repeat 1 53 0 8 1236 250 270 160 68 chr17 85410290 85410540 -9862111 - B4 SINE B4 -17 275 3 8 1236 343 222 104 67 chr17 85410757 85410921 -9861730 - B4A SINE B4 -122 170 1 8 1236 816 233 48 19 chr17 85411057 85411263 -9861388 - B3 SINE B2 0 216 5 8 1236 24 32 0 0 chr17 85411275 85411306 -9861345 + AT_rich Low_complexity Low_complexity 1 31 0 8 1236 204 135 0 0 chr17 85411308 85411345 -9861306 + (CATA)n Simple_repeat Simple_repeat 4 40 0 8 1236 674 228 144 12 chr17 85411359 85411532 -9861119 - B3 SINE B2 -20 196 1 8 1236 252 0 0 0 chr17 85412360 85412388 -9860263 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 8 1236 1018 29 6 115 chr17 85412388 85412545 -9860106 - B1_Mus1 SINE Alu -8 140 1 8 1236 198 0 0 0 chr17 85414632 85414654 -9857997 + (GGAA)n Simple_repeat Simple_repeat 1 22 0 8 1236 266 218 214 18 chr17 85416792 85416960 -9855691 - Charlie1 DNA MER1_type -17 2764 2564 8 1236 225 0 0 0 chr17 85417027 85417052 -9855599 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 8 1236 718 238 252 18 chr17 85417193 85417582 -9855069 - Charlie1 DNA MER1_type -571 2210 1731 8 1236 416 311 0 19 chr17 85417802 85417907 -9854744 - PB1D10 SINE Alu -8 109 7 8 1236 316 340 0 29 chr17 85417825 85417928 -9854723 - ID_B1 SINE B4 -57 167 68 8 1236 384 77 0 0 chr17 85418102 85418154 -9854497 + (TCCTG)n Simple_repeat Simple_repeat 3 54 0 8 1236 369 0 0 0 chr17 85418215 85418256 -9854395 + (T)n Simple_repeat Simple_repeat 1 41 0 8 1236 279 213 79 13 chr17 85418484 85418560 -9854091 - PB1D9 SINE Alu -18 102 22 8 1236 180 0 0 0 chr17 85418924 85418944 -9853707 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 8 1236 960 16 176 0 chr17 85419575 85419700 -9852951 - B1_Mus2 SINE Alu 0 147 1 8 1236 274 252 120 9 chr17 85419726 85419834 -9852817 - B1F SINE Alu -1 148 29 8 1236 223 261 0 0 chr17 85419860 85419925 -9852726 + T-rich Low_complexity Low_complexity 1 65 0 8 1236 516 285 35 7 chr17 85420491 85420636 -9852015 - RSINE1 SINE B4 -15 150 2 8 1236 21 57 0 0 chr17 85420783 85420818 -9851833 + AT_rich Low_complexity Low_complexity 1 35 0 8 1236 186 71 0 0 chr17 85421711 85421739 -9850912 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 8 1236 1125 58 0 0 chr17 85421739 85421877 -9850774 - B1_Mus2 SINE Alu -9 138 1 8 1236 498 294 56 0 chr17 85424448 85424591 -9848060 + RSINE1 SINE B4 7 157 -8 8 1236 648 189 0 8 chr17 85424637 85424770 -9847881 + B1_Mus1 SINE Alu 14 145 -3 8 1236 445 173 0 0 chr17 85424783 85424864 -9847787 + B3 SINE B2 39 119 -97 8 1236 923 171 37 16 chr17 85425042 85425232 -9847419 - B2_Mm2 SINE B2 0 195 2 8 1236 312 210 58 58 chr17 85426211 85426297 -9846354 + B1_Mur1 SINE Alu 63 148 -1 8 1236 23 0 0 0 chr17 85426586 85426609 -9846042 + AT_rich Low_complexity Low_complexity 1 23 0 8 1236 553 306 104 20 chr17 85427053 85427400 -9845251 - L1MB3 LINE L1 -33 6150 5775 8 1236 207 0 0 0 chr17 85428892 85428915 -9843736 + (CA)n Simple_repeat Simple_repeat 2 24 0 8 1236 318 26 0 0 chr17 85428915 85428953 -9843698 + (GA)n Simple_repeat Simple_repeat 2 40 0 8 1236 1095 90 7 0 chr17 85430568 85430712 -9841939 + B1_Mm SINE Alu 1 145 -2 8 1236 180 0 0 0 chr17 85430713 85430733 -9841918 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 8 1236 574 232 80 15 chr17 85431133 85431334 -9841317 - MER33 DNA MER1_type -86 238 25 8 1236 380 148 0 16 chr17 85431372 85431434 -9841217 + B1_Mur4 SINE Alu 27 87 -63 8 1236 315 0 0 0 chr17 85431679 85431714 -9840937 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 1236 282 283 121 0 chr17 85432865 85432964 -9839687 + MER53 DNA hAT 3 113 -80 8 1236 423 0 0 0 chr17 85432998 85433045 -9839606 + (TA)n Simple_repeat Simple_repeat 2 48 0 8 1236 642 89 0 0 chr17 85433045 85433135 -9839516 + (CA)n Simple_repeat Simple_repeat 2 91 0 8 1236 499 263 57 23 chr17 85433207 85433382 -9839269 + MER2 DNA MER2_type 161 341 -4 8 1236 847 105 7 20 chr17 85433977 85434123 -9838528 - B2_Mm1t SINE B2 -1 192 49 8 1236 537 280 115 11 chr17 85434294 85434485 -9838166 + B3 SINE B2 5 215 -1 8 1236 369 131 0 0 chr17 85434513 85434574 -9838077 + (TA)n Simple_repeat Simple_repeat 1 61 0 8 1236 1008 234 10 0 chr17 85434623 85434828 -9837823 + B3 SINE B2 4 210 -6 8 1236 258 61 20 39 chr17 85435159 85435210 -9837441 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 8 1236 573 15 0 0 chr17 85436111 85436177 -9836474 + (TC)n Simple_repeat Simple_repeat 1 66 0 8 1236 319 138 50 0 chr17 85437630 85437710 -9834941 + (CAGAGA)n Simple_repeat Simple_repeat 1 84 0 8 1236 387 289 59 0 chr17 85438116 85438251 -9834400 - L1M4 LINE L1 -1289 4857 4715 8 1236 1112 49 42 0 chr17 85438253 85438395 -9834256 + B1_Mus1 SINE Alu 1 148 0 8 1236 36 0 0 0 chr17 85438409 85438445 -9834206 + AT_rich Low_complexity Low_complexity 1 36 0 8 1236 910 158 0 14 chr17 85438458 85438606 -9834045 + B1_Mur2 SINE Alu 2 147 -2 8 1236 710 277 51 7 chr17 85438618 85438891 -9833760 - L1M4 LINE L1 -1434 4712 4428 8 1236 348 222 12 12 chr17 85438891 85438912 -9833739 + polypyrimidine Low_complexity Low_complexity 64 84 0 8 1236 782 65 21 28 chr17 85438912 85439055 -9833596 + (TCTCC)n Simple_repeat Simple_repeat 5 146 0 8 1236 348 222 12 12 chr17 85439055 85439115 -9833536 + polypyrimidine Low_complexity Low_complexity 3 63 0 8 1236 910 147 18 0 chr17 85439115 85439285 -9833366 + CT-rich Low_complexity Low_complexity 3 175 0 9 1236 207 0 0 0 chr17 85439538 85439561 -9833090 + (TTTTTG)n Simple_repeat Simple_repeat 5 27 0 9 1236 1096 76 7 7 chr17 85439571 85439717 -9832934 - B1_Mus2 SINE Alu -1 146 1 9 1236 1442 85 5 0 chr17 85441167 85441355 -9831296 - B2_Mm1a SINE B2 -4 189 1 9 1236 868 153 0 0 chr17 85442405 85442536 -9830115 + B1_Mur4 SINE Alu 1 131 -19 9 1236 321 308 100 0 chr17 85442543 85442673 -9829978 + RSINE1 SINE B4 6 148 -17 9 1236 601 208 84 62 chr17 85443383 85443562 -9829089 + B3 SINE B2 2 184 -11 9 1236 731 11 0 11 chr17 85443636 85443725 -9828926 + (GAGAA)n Simple_repeat Simple_repeat 4 91 0 9 1236 249 316 0 0 chr17 85444221 85444297 -9828354 + ID4 SINE ID 3 78 -5 9 1236 630 0 0 0 chr17 85444297 85444367 -9828284 + (CA)n Simple_repeat Simple_repeat 2 71 0 9 1236 189 0 0 0 chr17 85444443 85444464 -9828187 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 9 1236 592 228 78 0 chr17 85444497 85444664 -9827987 - B3A SINE B2 -17 181 2 9 1236 274 232 0 2 chr17 85445332 85445402 -9827249 - L1MB8 LINE L1 -202 5972 5904 9 1236 392 221 109 8 chr17 85445507 85445635 -9827016 - L1MB8 LINE L1 -469 5709 5569 9 1236 311 299 172 0 chr17 85446198 85446372 -9826279 - B3 SINE B2 -12 204 1 9 1236 204 163 0 0 chr17 85447105 85447148 -9825503 + (CCTA)n Simple_repeat Simple_repeat 1 43 0 9 1236 25 31 0 0 chr17 85447207 85447239 -9825412 + AT_rich Low_complexity Low_complexity 1 32 0 9 1236 509 234 42 19 chr17 85447789 85447978 -9824673 - B3 SINE B2 -5 190 1 9 1236 390 261 196 0 chr17 85448458 85448611 -9824040 - B3A SINE B2 -15 183 1 9 1236 4353 82 12 8 chr17 85448619 85448640 -9824011 - L1Md_F2 LINE L1 0 6582 6561 9 1236 243 0 0 0 chr17 85448640 85448667 -9823984 + (TTA)n Simple_repeat Simple_repeat 1 27 0 9 1236 4353 82 12 8 chr17 85448667 85449238 -9823413 - L1Md_F2 LINE L1 -22 6560 5989 9 1236 219 312 137 16 chr17 85449322 85449513 -9823138 + MIR SINE MIR 29 238 -24 9 1236 186 206 125 16 chr17 85449757 85449821 -9822830 + MIRc SINE MIR 19 89 -179 9 1236 520 193 18 9 chr17 85449821 85449931 -9822720 + B1_Mur3 SINE Alu 34 144 -5 9 1236 215 219 0 0 chr17 85449934 85449975 -9822676 + GA-rich Low_complexity Low_complexity 3 43 0 9 1236 1461 271 71 73 chr17 85450289 85450324 -9822327 - Lx8 LINE L1 -5 7468 7436 9 1236 261 0 0 0 chr17 85450324 85450353 -9822298 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 1236 1461 271 71 73 chr17 85450353 85450458 -9822193 - Lx8 LINE L1 -38 7435 7337 9 1236 1205 55 7 0 chr17 85450458 85450604 -9822047 - B1_Mus2 SINE Alu 0 147 1 9 1236 1461 271 71 73 chr17 85450604 85451122 -9821529 - Lx8 LINE L1 -137 7336 6810 9 1236 2235 139 82 42 chr17 85451547 85451952 -9820699 - MTC LTR MaLR 0 421 1 9 1236 1236 91 0 0 chr17 85452541 85452717 -9819934 + (TTCCC)n Simple_repeat Simple_repeat 1 176 0 9 1236 357 164 0 0 chr17 85452722 85452795 -9819856 + C-rich Low_complexity Low_complexity 4 76 0 9 1236 824 80 8 0 chr17 85452806 85452931 -9819720 - B1_Mus1 SINE Alu -16 132 7 9 1236 2370 112 88 19 chr17 85453009 85453171 -9819480 - RLTR19A LTR ERVK -2 494 332 9 1236 180 0 0 0 chr17 85453171 85453191 -9819460 + (CAA)n Simple_repeat Simple_repeat 2 21 0 9 1236 2370 112 88 19 chr17 85453191 85453438 -9819213 - RLTR19A LTR ERVK -165 331 57 9 1236 1357 74 0 5 chr17 85453563 85453754 -9818897 + B2_Mm2 SINE B2 6 195 0 9 1236 285 29 0 0 chr17 85453754 85453788 -9818863 + (GA)n Simple_repeat Simple_repeat 2 35 0 9 1236 399 41 0 0 chr17 85453786 85453835 -9818816 + (GGAA)n Simple_repeat Simple_repeat 4 52 0 9 1236 528 250 8 15 chr17 85453848 85453982 -9818669 + B1F2 SINE Alu 1 133 -16 9 1236 351 0 0 0 chr17 85453982 85454021 -9818630 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 1236 279 0 0 0 chr17 85454021 85454051 -9818600 + (GA)n Simple_repeat Simple_repeat 2 32 0 9 1236 228 333 0 21 chr17 85454130 85454225 -9818426 - ID_B1 SINE B4 -112 112 20 9 1236 411 283 79 82 chr17 85454271 85454619 -9818032 - L1M4 LINE L1 -4991 1551 1200 9 1236 300 97 32 16 chr17 85454619 85454682 -9817969 + (TA)n Simple_repeat Simple_repeat 2 65 0 9 1236 411 283 79 82 chr17 85454682 85454701 -9817950 - L1M4 LINE L1 -5343 1199 1183 9 1236 437 0 19 0 chr17 85454701 85454754 -9817897 + (CA)n Simple_repeat Simple_repeat 2 55 0 9 1236 411 283 79 82 chr17 85454754 85454789 -9817862 - L1M4 LINE L1 -5360 1182 1149 9 1236 834 11 0 0 chr17 85454873 85454968 -9817683 + (TTTC)n Simple_repeat Simple_repeat 4 98 0 9 1236 396 0 0 0 chr17 85454969 85455013 -9817638 + (CCTG)n Simple_repeat Simple_repeat 1 44 0 9 1236 659 102 130 0 chr17 85455013 85455121 -9817530 - B1_Mur4 SINE Alu -10 140 19 9 1236 21 57 0 0 chr17 85455124 85455159 -9817492 + AT_rich Low_complexity Low_complexity 1 35 0 9 1236 383 291 114 69 chr17 85455297 85455494 -9817157 - L1M4 LINE L1 -5504 1038 831 9 1236 512 241 107 36 chr17 85455494 85455662 -9816989 - B3A SINE B2 -16 182 3 9 1236 383 291 114 69 chr17 85455662 85455770 -9816881 - L1M4 LINE L1 -5712 830 720 9 1236 189 0 0 0 chr17 85455784 85455805 -9816846 + (TGGG)n Simple_repeat Simple_repeat 3 23 0 9 1236 372 244 35 106 chr17 85455807 85455949 -9816702 - MT2B LTR ERVL -303 298 167 9 1236 844 26 0 50 chr17 85455829 85455950 -9816701 - B1_Mus2 SINE Alu -31 116 2 9 1236 255 254 27 53 chr17 85455953 85456028 -9816623 - L1M4 LINE L1 -5809 733 661 9 1236 397 306 18 18 chr17 85457369 85457482 -9815169 - PB1D7 SINE Alu 0 120 8 9 1236 654 259 119 23 chr17 85457577 85457838 -9814813 - B4A SINE B4 0 292 7 9 1236 1339 190 107 160 chr17 85457894 85458407 -9814244 - RLTR19 LTR ERVK -1 498 13 9 1236 204 40 0 0 chr17 85458487 85458512 -9814139 + (TC)n Simple_repeat Simple_repeat 1 25 0 9 1236 450 169 67 0 chr17 85458520 85458609 -9814042 - B1_Mur3 SINE Alu -40 109 15 9 1236 1071 195 0 19 chr17 85458624 85458833 -9813818 - MTC LTR MaLR -216 205 1 9 154 213 65 0 0 chr17 85458918 85458949 -9813702 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 1237 1265 27 0 0 chr17 85460909 85461056 -9811595 + B1_Mus2 SINE Alu 1 147 0 9 1237 930 94 0 28 chr17 85461304 85461446 -9811205 - B1_Mus1 SINE Alu 0 148 11 9 1237 231 273 29 7 chr17 85461761 85461862 -9810789 + L1MD LINE L1 2445 2548 -3598 9 1237 25 31 0 0 chr17 85463871 85463903 -9808748 + AT_rich Low_complexity Low_complexity 1 32 0 9 1237 664 162 0 0 chr17 85464569 85464674 -9807977 - B3 SINE B2 -111 105 1 9 1237 380 252 25 13 chr17 85466213 85466370 -9806281 + (ACATG)n Simple_repeat Simple_repeat 4 162 0 9 1237 404 249 77 29 chr17 85466382 85466552 -9806099 + L1MB2 LINE L1 5964 6141 -30 9 1237 248 266 194 39 chr17 85466981 85467161 -9805490 + MLT1N2 LTR MaLR 355 562 0 9 1237 1196 48 0 7 chr17 85467264 85467412 -9805239 - B1_Mm SINE Alu 0 147 1 9 1237 441 0 0 0 chr17 85468497 85468546 -9804105 + (TG)n Simple_repeat Simple_repeat 1 49 0 9 1237 447 240 135 0 chr17 85469556 85469660 -9802991 - PB1D9 SINE Alu 0 120 3 9 1237 543 302 25 19 chr17 85470531 85470693 -9801958 - B3 SINE B2 -8 208 46 9 1237 384 212 0 24 chr17 85470691 85470773 -9801878 + MTD LTR MaLR 340 419 0 9 1237 220 308 51 13 chr17 85472803 85472882 -9799769 + ID4 SINE ID 1 82 -1 9 1237 796 207 18 0 chr17 85473389 85473553 -9799098 + ID_B1 SINE B4 1 167 -57 9 1237 682 150 26 0 chr17 85474120 85474233 -9798418 + B1_Mur2 SINE Alu 6 121 -28 9 1237 454 228 85 23 chr17 85474233 85474250 -9798401 + ID_B1 SINE B4 87 224 0 9 1237 948 236 18 23 chr17 85476501 85476718 -9795933 + B3 SINE B2 1 216 0 9 1237 591 53 0 0 chr17 85476807 85476882 -9795769 + (TCTCCC)n Simple_repeat Simple_repeat 5 79 0 9 1237 780 144 71 14 chr17 85476910 85477051 -9795600 - B1_Mur3 SINE Alu 0 149 1 9 1237 369 0 0 0 chr17 85477298 85477339 -9795312 + (TG)n Simple_repeat Simple_repeat 2 42 0 9 1237 274 222 0 0 chr17 85478469 85478521 -9794130 + B4A SINE B4 47 98 -194 9 1237 1101 84 0 0 chr17 85478521 85478675 -9793976 + B2_Mm2 SINE B2 1 154 -41 9 1237 273 29 0 0 chr17 85478677 85478711 -9793940 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 9 1237 435 289 13 39 chr17 85478730 85478885 -9793766 + B4A SINE B4 103 253 -39 9 1237 230 0 33 0 chr17 85479200 85479230 -9793421 + (TAAAAA)n Simple_repeat Simple_repeat 6 36 0 9 1237 1095 50 170 0 chr17 85479405 85479564 -9793087 + B2_Mm1t SINE B2 1 186 -7 9 1237 254 229 42 14 chr17 85479654 85479725 -9792926 - RSINE1 SINE B4 -90 75 3 9 1237 2347 91 28 12 chr17 85479765 85480087 -9792564 + ORR1A2 LTR MaLR 1 327 0 9 1237 516 278 0 31 chr17 85480115 85480245 -9792406 - B3A SINE B2 -72 126 1 9 1237 1057 109 175 10 chr17 85480795 85480989 -9791662 - URR1A DNA MER1_type 0 226 1 9 1237 497 205 8 0 chr17 85481828 85481945 -9790706 + (TA)n Simple_repeat Simple_repeat 1 118 0 9 1237 694 144 82 22 chr17 85483211 85483346 -9789305 - B1_Mur4 SINE Alu -5 145 3 9 1237 23 33 0 0 chr17 85483901 85483931 -9788720 + AT_rich Low_complexity Low_complexity 1 30 0 9 1237 252 289 71 10 chr17 85483950 85484048 -9788603 - RSINE1 SINE B4 -60 105 2 9 1237 480 312 63 0 chr17 85484341 85484546 -9788105 - ID_B1 SINE B4 -6 218 1 9 1237 227 229 129 16 chr17 85485119 85485181 -9787470 + Alu SINE Alu 2 70 -79 9 1237 189 0 0 0 chr17 85485193 85485214 -9787437 + (CAA)n Simple_repeat Simple_repeat 1 21 0 9 1237 621 0 0 0 chr17 85485669 85485738 -9786913 + (GAAA)n Simple_repeat Simple_repeat 1 69 0 9 1237 443 325 113 17 chr17 85486479 85486833 -9785818 + L1MB4 LINE L1 5758 6145 -35 9 1237 362 308 23 0 chr17 85487032 85487162 -9785489 - MER94 DNA AcHobo 0 134 2 9 1237 296 111 0 18 chr17 85488210 85488265 -9784386 + (CAAAA)n Simple_repeat Simple_repeat 5 58 0 9 1237 263 308 32 52 chr17 85488776 85488930 -9783721 + MIR SINE MIR 112 262 0 9 1237 326 161 22 11 chr17 85490741 85490825 -9781826 + ORR1D1 LTR MaLR 243 374 0 1 1237 702 287 72 98 chr17 85491090 85491476 -9781175 - MTE2b LTR MaLR -3 376 1 1 1237 3322 55 10 2 chr17 85491562 85491966 -9780685 - MTB_Mm LTR MaLR 0 407 1 1 1237 1248 63 79 23 chr17 85493122 85493299 -9779352 - B2_Mm1t SINE B2 -5 188 2 1 1237 328 226 150 67 chr17 85493311 85493491 -9779160 - B2_Mm2 SINE B2 0 195 1 1 1237 660 252 6 25 chr17 85493540 85493703 -9778948 + Lx7 LINE L1 7137 7296 -400 1 1237 26 30 0 0 chr17 85493959 85493992 -9778659 + AT_rich Low_complexity Low_complexity 1 33 0 1 1237 820 169 7 0 chr17 85493994 85494136 -9778515 - B1_Mur2 SINE Alu -2 147 5 1 1237 236 94 0 0 chr17 85495043 85495075 -9777576 - L1MC5 LINE L1 -1157 6804 6773 1 1237 363 364 11 11 chr17 85495319 85495497 -9777154 + (CA)n Simple_repeat Simple_repeat 1 178 0 1 1237 491 45 0 15 chr17 85496272 85496339 -9776312 + (TTCC)n Simple_repeat Simple_repeat 2 67 0 1 1237 1289 30 6 12 chr17 85496351 85496522 -9776129 - B2_Mm2 SINE B2 -24 171 2 1 1237 528 126 42 0 chr17 85496625 85496720 -9775931 - ORR1C2 LTR MaLR 0 384 286 1 1237 208 305 84 19 chr17 85496885 85496992 -9775659 - MIR SINE MIR -24 238 125 1 1237 1273 204 122 16 chr17 85497198 85497665 -9774986 - RMER4B LTR ERVK -2 583 34 1 1237 4328 140 52 87 chr17 85497899 85498821 -9773830 - RMER19B LTR ERVK -12 890 1 1 1237 319 189 26 51 chr17 85499017 85499095 -9773556 - PB1D9 SINE Alu -5 115 40 1 1237 1867 139 286 2 chr17 85499567 85500000 -9772651 - RLTR33 LTR ERVK -2 676 121 1 1237 730 144 0 8 chr17 85500001 85500120 -9772531 - RLTR33 LTR ERVK -560 118 1 1 1237 25 0 0 0 chr17 85500534 85500559 -9772092 + AT_rich Low_complexity Low_complexity 1 25 0 2 1237 305 227 13 26 chr17 85501550 85501627 -9771024 - L1M5 LINE L1 -681 5481 5406 3 1237 877 173 15 50 chr17 85501789 85501990 -9770661 + B2_Mm2 SINE B2 1 194 -1 4 1237 1586 48 11 16 chr17 85502054 85502243 -9770408 - B2_Mm2 SINE B2 -6 189 2 5 1237 24 0 0 0 chr17 85502297 85502321 -9770330 + AT_rich Low_complexity Low_complexity 1 24 0 6 1237 1178 276 65 105 chr17 85502843 85503380 -9769271 - L1MB7 LINE L1 -184 6000 5487 7 1237 1187 175 36 0 chr17 85503380 85503574 -9769077 - B3 SINE B2 -15 201 1 8 1237 1178 276 65 105 chr17 85503574 85503769 -9768882 - L1MB7 LINE L1 -698 5486 5297 7 1237 1727 36 0 0 chr17 85503780 85503972 -9768679 - B2_Mm1a SINE B2 0 193 2 9 1237 204 40 0 0 chr17 85504041 85504066 -9768585 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1 1237 1256 82 0 0 chr17 85504066 85504225 -9768426 - B2_Mm2 SINE B2 -34 161 3 1 1237 541 267 0 13 chr17 85504232 85504384 -9768267 - L1MA5 LINE L1 -29 6271 6122 1 1237 202 224 0 0 chr17 85504388 85504437 -9768214 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 1 1237 886 310 18 13 chr17 85504437 85504835 -9767816 + L1_Mur3 LINE L1 4264 4663 -1217 1 1237 1233 0 0 0 chr17 85505592 85505729 -9766922 + (TTCTCC)n Simple_repeat Simple_repeat 3 139 0 1 1237 7438 63 43 35 chr17 85505735 85506698 -9765953 - L1VL2 LINE L1 -1575 2040 1063 1 1237 1588 68 16 0 chr17 85506698 85506889 -9765762 - B2_Mm2 SINE B2 -1 194 1 1 1237 7438 69 18 16 chr17 85506889 85507672 -9764979 - L1VL2 LINE L1 -2553 1062 284 1 1237 736 175 16 0 chr17 85507693 85507819 -9764832 - B1_Mur3 SINE Alu -8 141 14 1 1237 332 184 96 104 chr17 85507720 85507835 -9764816 - MT2B LTR ERVL -337 264 151 1 1237 271 267 33 0 chr17 85508087 85508147 -9764504 - RMER15 LTR ERVL 0 575 514 2 1237 2136 173 42 5 chr17 85508185 85508562 -9764089 + ORR1B1 LTR MaLR 1 391 -3 2 1237 1629 127 8 7 chr17 85508600 85508874 -9763777 - RMER16 LTR ERVK -138 395 1 2 1237 4359 234 57 27 chr17 85508874 85509142 -9763509 - RMER15-int LTR ERVL -3865 1134 874 2 1237 1192 71 0 0 chr17 85509142 85509282 -9763369 - B1_Mus1 SINE Alu -6 142 3 2 1237 4359 234 57 27 chr17 85509282 85510114 -9762537 - RMER15-int LTR ERVL -4126 873 1 2 1237 2586 143 111 41 chr17 85510114 85510646 -9762005 - RMER15 LTR ERVL 0 575 7 2 1237 1996 141 72 0 chr17 85510654 85510988 -9761663 - ORR1B2 LTR MaLR -8 359 2 2 1237 205 325 13 0 chr17 85511053 85511130 -9761521 + G-rich Low_complexity Low_complexity 5 82 0 2 1237 382 206 206 0 chr17 85511184 85511286 -9761365 - ID_B1 SINE B4 0 224 102 2 1237 288 0 0 0 chr17 85511286 85511318 -9761333 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 1237 1250 28 7 7 chr17 85511507 85511652 -9760999 + B1_Mus1 SINE Alu 3 147 -1 2 1237 217 83 0 77 chr17 85511652 85511704 -9760947 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 2 1237 606 63 0 0 chr17 85512248 85512327 -9760324 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 3 1237 269 313 12 0 chr17 85513270 85513353 -9759298 + (TA)n Simple_repeat Simple_repeat 2 85 0 3 1237 204 40 0 0 chr17 85513959 85513984 -9758667 + (TTA)n Simple_repeat Simple_repeat 2 26 0 3 1237 1209 55 0 7 chr17 85513984 85514120 -9758531 - B1_Mus1 SINE Alu -12 136 1 3 1237 204 203 0 33 chr17 85514573 85514617 -9758034 + T-rich Low_complexity Low_complexity 16 59 0 3 1237 1036 16 159 0 chr17 85514617 85514743 -9757908 - B1_Mus2 SINE Alu 0 147 2 3 1237 204 203 0 33 chr17 85514743 85514759 -9757892 + T-rich Low_complexity Low_complexity 1 15 0 3 1237 370 267 117 0 chr17 85515547 85515667 -9756984 - B4A SINE B4 0 292 159 3 1237 481 278 7 0 chr17 85517459 85517603 -9755048 - B1_Mus2 SINE Alu -1 146 2 3 1237 245 258 30 15 chr17 85517834 85517968 -9754683 + (TAA)n Simple_repeat Simple_repeat 1 136 0 3 1237 27 0 0 0 chr17 85519576 85519603 -9753048 + AT_rich Low_complexity Low_complexity 1 27 0 4 1237 1051 114 0 7 chr17 85519607 85519748 -9752903 - B1_Mus1 SINE Alu -8 140 1 4 1237 1153 68 0 39 chr17 85520269 85520422 -9752229 + B1_Mus2 SINE Alu 1 147 0 4 1237 1001 134 57 77 chr17 85520818 85521012 -9751639 + B2_Mm2 SINE B2 2 191 -4 4 1237 378 0 0 0 chr17 85521044 85521086 -9751565 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1237 309 180 0 0 chr17 85521086 85521175 -9751476 + GA-rich Low_complexity Low_complexity 2 90 0 4 1237 650 299 70 9 chr17 85521188 85521401 -9751250 - B4 SINE B4 -21 271 46 4 1237 247 258 71 10 chr17 85521487 85521585 -9751066 + L1ME4a LINE L1 6020 6123 -1 4 1237 1296 75 0 6 chr17 85522228 85522403 -9750248 + B2_Mm2 SINE B2 10 183 -12 4 1237 1308 59 59 6 chr17 85524689 85524717 -9747934 - B2_Mm2 SINE B2 -14 181 150 4 1237 282 73 0 0 chr17 85524717 85524758 -9747893 + (TATG)n Simple_repeat Simple_repeat 4 44 0 5 1237 1308 59 59 6 chr17 85524758 85524899 -9747752 - B2_Mm2 SINE B2 -46 149 4 4 1237 192 111 0 0 chr17 85525551 85525587 -9747064 + (T)n Simple_repeat Simple_repeat 1 36 0 5 1237 22 35 0 0 chr17 85525620 85525649 -9747002 + AT_rich Low_complexity Low_complexity 1 29 0 5 1237 238 232 0 18 chr17 85525693 85525750 -9746901 + (TATATG)n Simple_repeat Simple_repeat 6 61 0 5 1237 202 276 85 73 chr17 85527756 85527838 -9744813 + L2c LINE L2 3111 3193 -194 5 1237 414 344 82 50 chr17 85527879 85528038 -9744613 + RSINE1 SINE B4 2 165 0 5 1237 22 35 0 0 chr17 85528043 85528072 -9744579 + AT_rich Low_complexity Low_complexity 1 29 0 5 1237 1107 208 63 12 chr17 85530023 85530276 -9742375 - Lx8 LINE L1 -581 6892 6627 5 1237 2360 173 133 25 chr17 85530276 85530311 -9742340 - MT2A LTR ERVL 0 533 499 5 1237 504 0 0 0 chr17 85530311 85530367 -9742284 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1237 2360 174 131 25 chr17 85530367 85530812 -9741839 - MT2A LTR ERVL -35 498 2 5 1237 413 217 144 23 chr17 85530855 85530987 -9741664 - Lx8 LINE L1 -882 6591 6444 5 1237 281 323 105 0 chr17 85531525 85531649 -9741002 + L1MC4 LINE L1 6462 6598 -1444 6 1237 1368 67 0 0 chr17 85531775 85531955 -9740696 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 6 1237 848 178 137 34 chr17 85531980 85532213 -9740438 - Lx4B LINE L1 -4 7054 6798 6 1237 425 271 182 70 chr17 85532215 85532501 -9740150 + L1MC4 LINE L1 6772 7089 -953 6 1237 51 58 0 0 chr17 85532501 85532587 -9740064 + AT_rich Low_complexity Low_complexity 1 86 0 6 1237 409 257 24 192 chr17 85532631 85532881 -9739770 - MER20 DNA MER1_type -11 208 1 6 1237 464 241 80 25 chr17 85532884 85533046 -9739605 + L1MC4 LINE L1 7140 7310 -732 6 1237 513 0 0 0 chr17 85533071 85533128 -9739523 + (TCTA)n Simple_repeat Simple_repeat 1 57 0 6 1237 637 164 18 18 chr17 85533161 85533273 -9739378 - B2_Mm2 SINE B2 -71 124 13 6 1237 270 264 0 27 chr17 85533421 85533495 -9739156 + L1MC4 LINE L1 7539 7610 -432 6 1237 1378 82 11 5 chr17 85533495 85533665 -9738986 + B2_Mm2 SINE B2 2 172 -23 6 1237 282 29 0 0 chr17 85533665 85533700 -9738951 + (CAAT)n Simple_repeat Simple_repeat 2 36 0 6 1237 1378 82 11 5 chr17 85533700 85533713 -9738938 + B2_Mm2 SINE B2 173 185 -10 6 1237 312 267 50 0 chr17 85535256 85535357 -9737294 + ID_B1 SINE B4 90 195 -29 6 1237 253 242 16 16 chr17 85535396 85535459 -9737192 + B4 SINE B4 18 80 -212 7 1237 546 29 0 0 chr17 85535531 85535599 -9737052 + (CA)n Simple_repeat Simple_repeat 2 69 0 7 1237 180 0 0 0 chr17 85535615 85535635 -9737016 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 7 1237 1232 228 65 45 chr17 85535731 85536085 -9736566 + ORR1D2 LTR MaLR 5 365 -5 7 1237 393 211 345 7 chr17 85536119 85536267 -9736384 - B3A SINE B2 0 198 1 7 1237 757 209 139 0 chr17 85536655 85536842 -9735809 - B3 SINE B2 -1 215 3 7 1237 438 256 93 163 chr17 85538304 85538341 -9734310 - B4 SINE B4 0 292 270 7 1237 402 21 0 0 chr17 85538341 85538388 -9734263 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1237 438 256 93 163 chr17 85538388 85538663 -9733988 - B4 SINE B4 -23 269 2 7 1237 26 0 0 0 chr17 85538683 85538709 -9733942 + AT_rich Low_complexity Low_complexity 1 26 0 7 1237 4157 35 12 6 chr17 85538709 85539190 -9733461 - L1Md_F2 LINE L1 -3 6579 6096 7 1237 2416 21 4 4 chr17 85539192 85539473 -9733178 + L1Md_F2 LINE L1 5801 6081 -501 7 1237 417 39 0 0 chr17 85539500 85539551 -9733100 + (TCCA)n Simple_repeat Simple_repeat 4 54 0 8 1237 710 247 11 90 chr17 85539568 85539746 -9732905 - RSINE1 SINE B4 0 165 2 8 1237 324 336 37 0 chr17 85540024 85540158 -9732493 - MLT1D LTR MaLR 0 505 367 8 1237 268 336 30 115 chr17 85540569 85540734 -9731917 - MLT1D LTR MaLR -347 215 65 8 1237 761 212 7 33 chr17 85541483 85541634 -9731017 - B1_Mur2 SINE Alu -1 148 2 8 1237 418 372 48 32 chr17 85543709 85544020 -9728631 - ERVL-E-int LTR ERVL -947 4720 4405 8 1237 2320 130 15 0 chr17 85544029 85544353 -9728298 - ORR1A4 LTR MaLR 0 329 1 8 1237 239 211 19 0 chr17 85544550 85544618 -9728033 + (TA)n Simple_repeat Simple_repeat 1 69 0 8 1237 235 250 0 0 chr17 85544644 85544688 -9727963 + B4A SINE B4 6 49 -243 8 1237 1212 48 14 0 chr17 85545207 85545352 -9727299 + B1_Mus1 SINE Alu 2 148 0 8 1237 207 0 0 0 chr17 85545352 85545375 -9727276 + (A)n Simple_repeat Simple_repeat 1 23 0 8 1237 7820 13 4 0 chr17 85545465 85546284 -9726367 - RLTR13B2 LTR ERVK 0 822 1 9 1237 587 243 64 12 chr17 85546570 85546741 -9725910 - B3A SINE B2 -18 180 1 9 1237 573 191 0 25 chr17 85546790 85546908 -9725743 - RLTR28 LTR ERVL -409 115 1 9 1237 1358 209 18 7 chr17 85546908 85547186 -9725465 + RMER5 LTR ERV1 254 534 0 9 1237 2195 108 50 12 chr17 85547195 85547536 -9725115 - ORR1A2 LTR MaLR -12 347 1 9 1237 22 0 0 0 chr17 85549435 85549457 -9723194 + AT_rich Low_complexity Low_complexity 1 22 0 9 1237 23 0 0 0 chr17 85549535 85549558 -9723093 + AT_rich Low_complexity Low_complexity 1 23 0 9 1237 564 248 138 16 chr17 85549594 85549840 -9722811 + B4 SINE B4 1 276 -16 9 1237 449 58 14 0 chr17 85550136 85550205 -9722446 + (CCCCCT)n Simple_repeat Simple_repeat 3 72 0 9 1237 1677 37 5 0 chr17 85552085 85552274 -9720377 + B2_Mm1t SINE B2 1 190 -3 9 1237 1626 155 35 54 chr17 85552619 85553075 -9719576 - RMER17C LTR ERVK -519 439 16 1 1237 615 60 0 0 chr17 85553469 85553553 -9719098 + (TTTC)n Simple_repeat Simple_repeat 1 84 0 1 1237 1197 58 0 0 chr17 85553553 85553690 -9718961 - B1_Mus1 SINE Alu -11 137 1 1 1237 3082 142 119 17 chr17 85553872 85554454 -9718197 + Lx LINE L1 6007 6647 -7 1 1237 237 278 43 86 chr17 85554788 85555020 -9717631 + RLTR21 LTR ERVK 1085 1306 -266 1 1237 286 274 0 31 chr17 85555023 85555121 -9717530 + (TG)n Simple_repeat Simple_repeat 2 96 0 1 1237 230 227 84 102 chr17 85555126 85555352 -9717299 + RLTR21 LTR ERVK 1085 1306 -266 1 1237 703 233 120 62 chr17 85555357 85555632 -9717019 - B4A SINE B4 0 292 2 1 1237 579 220 8 17 chr17 85555757 85555877 -9716774 + PB1D9 SINE Alu 2 120 0 1 1237 22 35 0 0 chr17 85556952 85556981 -9715670 + AT_rich Low_complexity Low_complexity 1 29 0 1 1237 1292 51 90 11 chr17 85557197 85557219 -9715432 - B2_Mm2 SINE B2 -3 192 171 1 1237 230 73 0 24 chr17 85557219 85557261 -9715390 + (TATG)n Simple_repeat Simple_repeat 4 44 0 1 1237 1292 51 90 11 chr17 85557261 85557415 -9715236 - B2_Mm2 SINE B2 -25 170 3 1 1237 28 0 0 0 chr17 85557477 85557505 -9715146 + AT_rich Low_complexity Low_complexity 1 28 0 1 1237 396 0 0 0 chr17 85557898 85557942 -9714709 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1237 237 132 0 0 chr17 85559293 85559331 -9713320 + (T)n Simple_repeat Simple_repeat 1 38 0 1 1237 316 226 111 16 chr17 85559425 85559551 -9713100 - B1F2 SINE Alu -8 141 4 1 1237 187 54 54 0 chr17 85559619 85559656 -9712995 + (TGGGGG)n Simple_repeat Simple_repeat 2 40 0 1 1237 1403 71 16 0 chr17 85559781 85559963 -9712688 - B2_Mm2 SINE B2 -9 186 2 1 1237 236 320 0 0 chr17 85560334 85560412 -9712239 + ID2 SINE ID 2 79 -4 1 1237 629 123 9 0 chr17 85560417 85560523 -9712128 + (TAGA)n Simple_repeat Simple_repeat 2 108 0 1 1237 1206 42 0 7 chr17 85560699 85560844 -9711807 - B1_Mm SINE Alu -2 145 2 1 1237 1490 50 0 6 chr17 85560861 85561043 -9711608 - B2_Mm2 SINE B2 -14 181 1 1 1237 1358 43 15 71 chr17 85561054 85561252 -9711399 - B2_Mm1a SINE B2 -6 187 1 1 1237 327 49 0 0 chr17 85561453 85561494 -9711157 + (CGAA)n Simple_repeat Simple_repeat 2 42 0 1 1237 312 294 43 11 chr17 85561949 85562042 -9710609 - PB1 SINE Alu -20 107 12 1 1237 215 157 20 0 chr17 85562065 85562116 -9710535 + C-rich Low_complexity Low_complexity 4 55 0 1 1237 288 77 0 0 chr17 85562949 85562988 -9709663 + (TC)n Simple_repeat Simple_repeat 1 39 0 1 1237 526 176 0 36 chr17 85562988 85563100 -9709551 - B1_Mus1 SINE Alu -40 108 1 1 1237 260 229 16 153 chr17 85562994 85563118 -9709533 - MT2B LTR ERVL -345 256 150 1 1237 861 104 33 19 chr17 85563230 85563652 -9708999 + (TCTA)n Simple_repeat Simple_repeat 1 427 0 1 1237 240 154 0 0 chr17 85564264 85564316 -9708335 + (TCTCTG)n Simple_repeat Simple_repeat 2 53 0 1 1237 304 289 133 0 chr17 85566209 85566344 -9706307 - L3 LINE CR1 -808 3681 3529 1 1237 427 324 37 27 chr17 85566961 85567148 -9705503 - MLT1F1 LTR MaLR -2 567 379 1 1237 1182 62 0 7 chr17 85567360 85567507 -9705144 + B1_Mus1 SINE Alu 3 148 0 1 1237 408 83 0 0 chr17 85567589 85567649 -9705002 - ORR1B1 LTR MaLR 0 394 335 1 1237 180 0 0 0 chr17 85567662 85567682 -9704969 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 1 1237 1027 126 6 0 chr17 85567682 85567841 -9704810 - B2_Mm1a SINE B2 -33 160 1 1 1237 1351 142 78 59 chr17 85567852 85568159 -9704492 - ORR1B1 LTR MaLR -41 353 41 1 1237 860 286 129 54 chr17 85568163 85568644 -9704007 + Lx8 LINE L1 6954 7470 -3 1 1237 215 365 39 0 chr17 85569341 85569445 -9703206 - MIRc SINE MIR -118 150 43 1 1237 1175 227 0 13 chr17 85569477 85569705 -9702946 + URR1B DNA MER1_type 1 225 0 1 1237 525 330 94 26 chr17 85570140 85570523 -9702128 + L1MB8 LINE L1 5761 6169 -9 1 1237 296 303 20 20 chr17 85572890 85572991 -9699660 + L1ME2z LINE L1 6295 6395 -49 1 1237 1449 54 32 0 chr17 85573048 85573233 -9699418 - B2_Mm2 SINE B2 -3 192 2 1 1237 214 158 0 0 chr17 85574090 85574128 -9698523 + G-rich Low_complexity Low_complexity 3 40 0 1 1237 189 0 0 0 chr17 85574603 85574624 -9698027 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1 1237 872 167 0 45 chr17 85575423 85575580 -9697071 + B1_Mur4 SINE Alu 1 150 0 1 1237 21 36 0 0 chr17 85575641 85575669 -9696982 + AT_rich Low_complexity Low_complexity 1 28 0 1 1237 1449 54 36 36 chr17 85575677 85575869 -9696782 - B2_Mm2 SINE B2 -2 193 2 1 1237 351 207 0 47 chr17 85576122 85576208 -9696443 - B1_Mur1 SINE Alu -2 147 66 1 1237 325 343 80 15 chr17 85577567 85577768 -9694883 + MIR SINE MIR 33 246 -16 1 1237 783 305 45 15 chr17 85577894 85578227 -9694424 + Lx8 LINE L1 6974 7316 -157 1 1237 1058 116 12 0 chr17 85578833 85579006 -9693645 + (TTTC)n Simple_repeat Simple_repeat 2 176 0 1 1237 809 92 104 30 chr17 85579008 85579142 -9693509 - B1_Mur4 SINE Alu -6 144 1 1 1237 213 226 63 16 chr17 85581294 85581357 -9691294 + PB1D7 SINE Alu 46 111 -9 1 1237 240 286 185 16 chr17 85581440 85581689 -9690962 - B4 SINE B4 0 292 2 1 1237 3316 38 13 3 chr17 85581862 85582254 -9690397 + MTA_Mm LTR MaLR 1 396 0 1 1237 279 0 0 0 chr17 85582472 85582503 -9690148 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1237 468 312 50 85 chr17 85582773 85583032 -9689619 + B4A SINE B4 4 253 -39 1 1237 29 28 0 0 chr17 85583505 85583541 -9689110 + AT_rich Low_complexity Low_complexity 1 36 0 1 1237 31 26 0 0 chr17 85583661 85583699 -9688952 + AT_rich Low_complexity Low_complexity 1 38 0 1 1237 638 217 87 0 chr17 85584106 85584244 -9688407 - B1_Mur4 SINE Alu 0 150 1 1 1237 370 261 202 0 chr17 85584894 85585013 -9687638 + RSINE1 SINE B4 3 145 -20 1 1237 30 27 0 0 chr17 85586416 85586453 -9686198 + AT_rich Low_complexity Low_complexity 1 37 0 1 1237 198 0 0 0 chr17 85587567 85587589 -9685062 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 1237 414 293 69 35 chr17 85587592 85587737 -9684914 - RSINE1 SINE B4 -13 152 3 1 1237 211 333 11 11 chr17 85587782 85587876 -9684775 + MIR SINE MIR 57 150 -112 1 1237 222 234 21 0 chr17 85588027 85588103 -9684548 + (TG)n Simple_repeat Simple_repeat 1 77 0 1 1237 219 133 0 62 chr17 85588685 85588733 -9683918 + C-rich Low_complexity Low_complexity 3 47 0 1 1237 21 0 0 0 chr17 85588874 85588895 -9683756 + AT_rich Low_complexity Low_complexity 1 21 0 1 1237 327 49 0 0 chr17 85589363 85589404 -9683247 + (T)n Simple_repeat Simple_repeat 1 41 0 1 1238 637 301 48 120 chr17 85591826 85592135 -9680516 - MER2 DNA MER2_type -10 335 49 1 1238 551 204 218 68 chr17 85593245 85593313 -9679338 - B4A SINE B4 0 292 228 1 1238 188 67 0 32 chr17 85593313 85593344 -9679307 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1 1238 551 204 218 68 chr17 85593344 85593527 -9679124 - B4A SINE B4 -65 227 5 1 1238 276 30 0 0 chr17 85593585 85593618 -9679033 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1238 273 310 19 99 chr17 85593622 85593783 -9678868 - RSINE1 SINE B4 -8 157 10 1 1238 335 83 17 0 chr17 85593966 85594026 -9678625 - B2_Mm1a SINE B2 -6 187 127 1 1238 1105 131 71 0 chr17 85594061 85594229 -9678422 - B2_Mm2 SINE B2 -14 181 2 1 1238 276 255 137 31 chr17 85594419 85594676 -9677975 + MLT1A1 LTR MaLR 1 292 -73 1 1238 267 31 0 0 chr17 85594720 85594752 -9677899 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1238 448 258 0 32 chr17 85594888 85595012 -9677639 - RSINE1 SINE B4 -45 120 1 1 1238 333 225 0 0 chr17 85595144 85595215 -9677436 + ID4_ SINE ID 1 71 -12 1 1238 267 203 130 0 chr17 85595509 85595578 -9677073 + L1M5 LINE L1 4649 4726 -1420 1 1238 206 81 0 26 chr17 85595793 85595831 -9676820 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1 1238 396 262 117 0 chr17 85595832 85595935 -9676716 - PB1D10 SINE Alu -2 115 1 1 1238 381 313 31 82 chr17 85596220 85596537 -9676114 + L1ME3 LINE L1 5660 5960 -202 1 1238 628 238 33 0 chr17 85598143 85598294 -9674357 - B4 SINE B4 -18 274 119 1 1238 263 244 66 50 chr17 85598851 85598972 -9673679 - Charlie14a DNA MER1_type -523 641 519 1 1238 292 268 100 30 chr17 85599137 85599237 -9673414 - PB1D10 SINE Alu -5 112 6 1 1238 574 278 80 6 chr17 85599156 85599319 -9673332 - ID_B1 SINE B4 -48 176 2 1 1238 230 245 86 29 chr17 85599971 85600076 -9672575 + MamRep4096 DNA hAT? 126 236 -190 1 1238 283 184 40 0 chr17 85600317 85600393 -9672258 + CT-rich Low_complexity Low_complexity 3 81 0 1 1238 1036 73 13 0 chr17 85601329 85601479 -9671172 + B2_Mm1t SINE B2 2 153 -40 1 1238 345 98 316 9 chr17 85601504 85601610 -9671041 + B2_Mm2 SINE B2 46 187 -8 1 1238 228 154 0 0 chr17 85602414 85602466 -9670185 + A-rich Low_complexity Low_complexity 2 53 0 1 1238 228 67 0 0 chr17 85602989 85603019 -9669632 + (GA)n Simple_repeat Simple_repeat 2 31 0 1 1238 26 30 0 0 chr17 85603037 85603070 -9669581 + AT_rich Low_complexity Low_complexity 1 33 0 1 1238 360 267 10 179 chr17 85603117 85603313 -9669338 - RSINE1 SINE B4 0 165 3 1 1238 633 252 59 20 chr17 85603340 85603542 -9669109 - B3 SINE B2 -3 213 4 1 1238 243 290 53 21 chr17 85603790 85603885 -9668766 + MIR SINE MIR 42 139 -69 1 1238 1450 146 5 14 chr17 85604528 85604751 -9667900 - URR1A DNA MER1_type -1 225 5 1 1238 347 348 6 12 chr17 85605191 85605354 -9667297 + RSINE1 SINE B4 4 165 0 2 1238 3488 13 8 2 chr17 85605859 85606253 -9666398 + MTA_Mm LTR MaLR 1 396 0 2 1238 1185 48 0 7 chr17 85607480 85607627 -9665024 + B1_Mus2 SINE Alu 1 146 -1 2 1238 1627 179 140 8 chr17 85607785 85608141 -9664510 + MTD LTR MaLR 2 404 -15 2 1238 237 33 0 0 chr17 85609971 85610001 -9662650 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 1238 234 91 0 0 chr17 85611090 85611123 -9661528 + (TTTCG)n Simple_repeat Simple_repeat 3 35 0 2 1238 847 144 72 0 chr17 85611134 85611273 -9661378 - B1_Mur3 SINE Alu 0 149 1 2 1238 21 57 0 0 chr17 85611842 85611877 -9660774 + AT_rich Low_complexity Low_complexity 1 35 0 2 1238 282 56 0 0 chr17 85612114 85612150 -9660501 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1238 354 321 89 26 chr17 85612190 85612459 -9660192 - B4A SINE B4 -5 287 2 2 1238 618 267 12 24 chr17 85613333 85613498 -9659153 + RSINE1 SINE B4 3 165 0 2 1238 618 176 0 0 chr17 85613498 85613617 -9659034 + (CA)n Simple_repeat Simple_repeat 1 119 0 2 1238 3783 148 45 24 chr17 85613702 85614407 -9658244 - RMER6D LTR ERVK 0 720 1 2 1238 381 310 8 8 chr17 85614544 85614661 -9657990 - PB1D7 SINE Alu 0 120 4 2 1238 286 343 15 22 chr17 85615549 85615686 -9656965 - MLT1A LTR MaLR -229 145 10 2 1238 455 284 33 13 chr17 85616219 85616369 -9656282 - MER58A DNA MER1_type -1 223 71 2 1238 228 116 67 44 chr17 85616837 85616882 -9655769 + MusHAL1 LINE L1 2448 2493 -219 2 1238 271 258 54 0 chr17 85617389 85617482 -9655169 - MLT1H1 LTR MaLR -18 577 480 2 1238 448 305 73 66 chr17 85617470 85617772 -9654879 - MLT1H1 LTR MaLR -251 304 1 2 1238 461 243 64 26 chr17 85617953 85618109 -9654542 - L1MD2 LINE L1 -24 6335 6174 2 1238 285 324 52 23 chr17 85618163 85618337 -9654314 - MER70B LTR ERVL -7 465 287 2 1238 372 315 31 8 chr17 85618365 85618493 -9654158 - MER70B LTR ERVL -278 300 170 2 1238 3558 108 22 15 chr17 85618498 85619041 -9653610 - Lx2 LINE L1 -543 6454 5908 2 1238 638 128 35 11 chr17 85619041 85619152 -9653499 + Lx2 LINE L1 5802 5949 -351 2 1238 1286 14 0 0 chr17 85619155 85619301 -9653350 - B1_Mm SINE Alu 0 147 2 2 1238 300 27 0 0 chr17 85619332 85619369 -9653282 + (TGGGGG)n Simple_repeat Simple_repeat 4 40 0 2 1238 1073 279 70 56 chr17 85619465 85620504 -9652147 - L1MD2 LINE L1 -387 5972 4924 2 1238 744 319 46 34 chr17 85621855 85622118 -9650533 + B4A SINE B4 11 276 -16 2 1238 593 306 60 74 chr17 85622949 85623464 -9649187 - L1MC4a LINE L1 -9 7873 7366 2 1238 390 317 72 12 chr17 85624281 85624447 -9648204 + MIRb SINE MIR 93 268 0 2 1238 267 133 0 0 chr17 85624830 85624875 -9647776 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1238 213 304 65 11 chr17 85625770 85625863 -9646788 + L2b LINE L2 3272 3369 -6 2 1238 21 36 0 0 chr17 85627633 85627661 -9644990 + AT_rich Low_complexity Low_complexity 1 28 0 2 1238 27 0 0 0 chr17 85627853 85627880 -9644771 + AT_rich Low_complexity Low_complexity 1 27 0 2 1238 4417 12 2 24 chr17 85628334 85628838 -9643813 + MT2_Mm LTR ERVL 1 493 0 2 1238 47702 16 14 1 chr17 85628838 85634130 -9638521 + MERVL-int LTR ERVL 1 5360 -125 2 1238 362 167 46 35 chr17 85634130 85634217 -9638434 + ORR1A3-int LTR MaLR 553 640 -1323 2 1238 321 0 0 0 chr17 85634217 85634255 -9638396 + MERVL-int LTR ERVL 5448 5485 0 2 1238 4417 12 2 24 chr17 85634255 85634759 -9637892 + MT2_Mm LTR ERVL 1 493 0 2 1238 830 79 34 24 chr17 85636612 85636820 -9635831 + (CCCCCA)n Simple_repeat Simple_repeat 1 210 0 2 1238 268 309 52 0 chr17 85637433 85637530 -9635121 - MIR SINE MIR -50 212 111 2 1238 275 298 138 12 chr17 85637933 85638093 -9634558 - MLT1H-int LTR MaLR -82 1407 1228 2 1238 218 146 0 40 chr17 85638093 85638143 -9634508 + (CACG)n Simple_repeat Simple_repeat 3 50 0 2 1238 232 355 51 26 chr17 85638304 85638460 -9634191 - MLT1H-int LTR MaLR -455 954 795 2 1238 207 0 0 0 chr17 85638585 85638608 -9634043 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1238 459 335 60 31 chr17 85638649 85639052 -9633599 - MLT1H-int LTR MaLR -718 771 330 2 1238 331 284 0 10 chr17 85639097 85639193 -9633458 - B4 SINE B4 -6 286 192 2 1238 311 289 98 44 chr17 85639180 85639383 -9633268 - MLT1H-int LTR MaLR -1091 398 185 2 1238 244 247 66 32 chr17 85639380 85639456 -9633195 - ID4_ SINE ID -4 79 12 2 1238 1834 153 137 9 chr17 85639903 85640232 -9632419 + ORR1D1 LTR MaLR 4 374 0 2 1238 251 347 0 10 chr17 85641309 85641408 -9631243 + CT-rich Low_complexity Low_complexity 1 98 0 2 1238 795 293 58 44 chr17 85642935 85643299 -9629352 - MLT2B1 LTR ERVL -151 369 1 2 1238 230 299 36 78 chr17 85643349 85643516 -9629135 - L1MB8 LINE L1 -40 6138 5979 2 1238 608 221 7 87 chr17 85643661 85643810 -9628841 - Lx5 LINE L1 -714 6336 6200 2 1238 1190 48 7 7 chr17 85643838 85643985 -9628666 - B1_Mus1 SINE Alu -1 147 1 2 1238 411 285 131 39 chr17 85643991 85644325 -9628326 - L1MC1 LINE L1 0 6333 5976 2 1238 243 299 23 0 chr17 85644955 85645042 -9627609 + (TG)n Simple_repeat Simple_repeat 2 90 0 2 1238 1065 216 16 74 chr17 85645333 85645643 -9627008 - B4 SINE B4 0 292 1 2 1238 296 267 33 0 chr17 85645959 85646049 -9626602 - L1MC5 LINE L1 -909 7052 6960 2 1238 410 275 14 35 chr17 85647709 85647852 -9624799 + RSINE1 SINE B4 3 142 -23 2 1238 360 0 0 0 chr17 85647852 85647892 -9624759 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1238 1443 126 14 5 chr17 85648859 85649082 -9623569 + URR1A DNA MER1_type 2 226 0 2 1238 582 271 152 73 chr17 85649109 85649439 -9623212 + MTE2a LTR MaLR 24 379 0 2 1238 3943 57 16 56 chr17 85649667 85650225 -9622426 - L1_Mus3 LINE L1 -3 6635 6100 2 1238 716 325 40 13 chr17 85650365 85650744 -9621907 + L1MA4 LINE L1 5608 5983 -1477 2 1238 192 77 0 0 chr17 85650756 85650782 -9621869 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 1238 405 109 0 0 chr17 85651177 85651241 -9621410 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 1238 435 311 108 21 chr17 85651402 85651596 -9621055 + B3 SINE B2 6 216 0 2 1238 22 0 0 0 chr17 85652036 85652058 -9620593 + AT_rich Low_complexity Low_complexity 1 22 0 2 1238 216 0 0 0 chr17 85652187 85652211 -9620440 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 2 1238 22 0 0 0 chr17 85652217 85652239 -9620412 + AT_rich Low_complexity Low_complexity 1 22 0 2 1238 1131 121 63 0 chr17 85652253 85652427 -9620224 - B2_Mm2 SINE B2 -8 187 3 2 1238 26 0 0 0 chr17 85652436 85652462 -9620189 + AT_rich Low_complexity Low_complexity 1 26 0 2 1238 324 200 0 0 chr17 85653021 85653096 -9619555 + CT-rich Low_complexity Low_complexity 1 75 0 2 1238 762 134 0 0 chr17 85653295 85653422 -9619229 + (CA)n Simple_repeat Simple_repeat 1 127 0 2 1238 824 286 10 56 chr17 85653422 85653726 -9618925 - B4A SINE B4 -1 291 2 2 1238 247 234 64 13 chr17 85653767 85653845 -9618806 - L1MC4 LINE L1 -524 7518 7437 2 1238 398 223 78 0 chr17 85653852 85653955 -9618696 + Lx9 LINE L1 6547 6657 -987 2 1238 382 131 46 92 chr17 85653984 85654093 -9618558 + Lx9 LINE L1 7541 7644 0 2 1238 1216 48 0 0 chr17 85654587 85654733 -9617918 + B1_Mus1 SINE Alu 1 146 -2 2 1238 306 0 0 0 chr17 85654733 85654767 -9617884 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 2 1238 1654 117 60 113 chr17 85655260 85655693 -9616958 + RMER17C LTR ERVK 1 410 0 2 1238 540 211 0 0 chr17 85656946 85657041 -9615610 + B1F2 SINE Alu 37 131 -18 2 1238 648 173 0 0 chr17 85658824 85659003 -9613648 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 1238 1381 235 60 6 chr17 85659892 85660243 -9612408 - ORR1D2 LTR MaLR 0 370 1 2 1238 511 316 68 0 chr17 85660521 85660711 -9611940 + MLT1E2 LTR MaLR 1 203 -421 2 1238 662 345 47 6 chr17 85660741 85661049 -9611602 + MLT1E2 LTR MaLR 270 587 -37 2 1238 1160 246 63 12 chr17 85661564 85661897 -9610754 - Lx8 LINE L1 -219 7254 6905 2 1238 1473 320 14 36 chr17 85661953 85662539 -9610112 + Lx8 LINE L1 6250 6822 -651 2 1238 297 109 0 0 chr17 85662702 85662757 -9609894 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1238 186 43 0 0 chr17 85663046 85663069 -9609582 + (TGGGGG)n Simple_repeat Simple_repeat 1 23 0 2 1238 727 167 15 0 chr17 85663069 85663201 -9609450 - B1_Mus2 SINE Alu -8 139 6 2 1238 6086 20 1 0 chr17 85663392 85664085 -9608566 + L1Md_T LINE L1 4893 5586 -297 2 1238 9177 5 0 0 chr17 85664085 85665081 -9607570 + L1Md_T LINE L1 5587 6582 0 2 1238 21 36 0 0 chr17 85665805 85665833 -9606818 + AT_rich Low_complexity Low_complexity 1 28 0 2 1238 296 276 47 19 chr17 85666519 85666626 -9606025 - MIRb SINE MIR -35 233 124 2 1238 191 32 65 0 chr17 85666913 85666944 -9605707 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2 1238 369 314 41 8 chr17 85667047 85667083 -9605568 - MER2 DNA MER2_type -9 336 296 2 1238 395 95 0 13 chr17 85667083 85667158 -9605493 + (TCTA)n Simple_repeat Simple_repeat 1 74 0 2 1238 369 314 41 8 chr17 85667158 85667243 -9605408 - MER2 DNA MER2_type -50 295 212 2 1238 828 290 0 0 chr17 85667249 85667470 -9605181 - ID_B1 SINE B4 -2 222 2 2 1238 225 287 55 55 chr17 85667811 85667971 -9604680 - MIR SINE MIR -48 220 53 2 1238 1030 200 239 29 chr17 85668633 85668942 -9603709 - ORR1D1 LTR MaLR 0 374 1 2 1238 285 321 51 40 chr17 85669682 85669857 -9602794 + MIR SINE MIR 65 241 -21 2 1238 726 153 275 6 chr17 85670279 85670329 -9602322 - URR1A DNA MER1_type 0 226 151 2 1238 243 0 0 0 chr17 85670329 85670356 -9602295 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1238 726 153 275 6 chr17 85670356 85670483 -9602168 - URR1A DNA MER1_type -76 150 2 2 1238 389 321 84 4 chr17 85670899 85671174 -9601477 - L2 LINE L2 -1210 2209 1913 2 1238 228 35 0 0 chr17 85671660 85671689 -9600962 + (CCTG)n Simple_repeat Simple_repeat 2 30 0 2 1238 209 226 32 0 chr17 85671743 85671805 -9600846 + CT-rich Low_complexity Low_complexity 1 64 0 2 1238 724 242 27 11 chr17 85672922 85673110 -9599541 + MTE2a-int LTR MaLR 213 403 -1177 2 1238 2249 271 178 24 chr17 85673116 85674009 -9598642 + MTE2a-int LTR MaLR 545 1575 -5 2 1238 1012 260 40 114 chr17 85674014 85674409 -9598242 + MTE2a LTR MaLR 1 366 -13 2 1238 352 204 100 22 chr17 85674795 85674885 -9597766 + RSINE1 SINE B4 28 124 -41 2 1238 222 37 0 0 chr17 85674885 85674912 -9597739 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1238 427 279 66 33 chr17 85675690 85675840 -9596811 + ID_B1 SINE B4 1 155 -69 2 1238 615 272 44 6 chr17 85675840 85675999 -9596652 + RSINE1 SINE B4 1 165 0 3 1238 244 324 107 45 chr17 85675850 85676028 -9596623 + B3A SINE B2 10 198 0 3 1238 319 165 36 9 chr17 85676238 85676348 -9596303 + (TG)n Simple_repeat Simple_repeat 2 114 0 3 1238 371 301 11 18 chr17 85676422 85676561 -9596090 - B4A SINE B4 -152 140 2 3 1238 405 136 0 0 chr17 85676675 85676741 -9595910 + (T)n Simple_repeat Simple_repeat 1 66 0 3 1238 1290 159 56 89 chr17 85677505 85677550 -9595101 - MT2B LTR ERVL 0 601 559 3 1238 816 11 0 0 chr17 85677550 85677643 -9595008 + (TTTC)n Simple_repeat Simple_repeat 4 96 0 3 1238 1290 164 343 75 chr17 85677643 85677998 -9594653 - MT2B LTR ERVL -43 558 68 3 1238 421 234 0 11 chr17 85678029 85678124 -9594527 - MIRb SINE MIR -95 173 80 3 1238 1182 179 17 9 chr17 85678441 85678672 -9593979 + L1MA6 LINE L1 6066 6298 -2 3 1238 23 0 0 0 chr17 85678840 85678863 -9593788 + AT_rich Low_complexity Low_complexity 1 23 0 3 1238 766 249 12 8 chr17 85678909 85679099 -9593552 - B3A SINE B2 -34 182 1 3 1238 274 224 0 0 chr17 85679793 85679842 -9592809 + B4A SINE B4 3 51 -241 3 1238 3786 199 96 16 chr17 85679842 85680776 -9591875 + MYSERV-int LTR ERVK 5540 6548 -2 3 1238 2077 154 20 6 chr17 85680778 85681130 -9591521 + RLTR15 LTR ERVK 1 357 -2 3 1238 983 215 37 14 chr17 85681140 85681357 -9591294 + B4A SINE B4 67 288 -4 3 1238 1031 265 102 26 chr17 85681421 85681773 -9590878 + MTE2a LTR MaLR 1 379 0 3 1238 782 173 213 6 chr17 85683321 85683495 -9589156 + B3 SINE B2 1 210 -6 3 1238 2013 152 91 6 chr17 85684249 85684612 -9588039 - ORR1B1 LTR MaLR 0 394 1 3 1238 979 245 155 3 chr17 85684635 85684938 -9587713 + ORR1D1 LTR MaLR 1 349 -25 3 1238 180 0 0 0 chr17 85685412 85685432 -9587219 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1238 686 151 0 0 chr17 85685461 85685580 -9587071 + B1_Mur4 SINE Alu 31 149 -1 3 1238 203 147 0 0 chr17 85685641 85685675 -9586976 + (TGGGGG)n Simple_repeat Simple_repeat 3 36 0 3 1238 607 277 136 55 chr17 85685884 85686193 -9586458 + MTE2a LTR MaLR 39 372 -7 3 1238 192 111 0 0 chr17 85688693 85688729 -9583922 + (CCCA)n Simple_repeat Simple_repeat 3 38 0 3 1238 390 231 0 0 chr17 85688862 85688979 -9583672 + (TG)n Simple_repeat Simple_repeat 1 117 0 3 1238 922 213 76 0 chr17 85689212 85689409 -9583242 + B3 SINE B2 1 212 -4 3 1238 523 265 204 9 chr17 85689435 85689660 -9582991 + B4A SINE B4 2 270 -22 3 1238 709 251 282 16 chr17 85689817 85690312 -9582339 + L1MA6 LINE L1 5646 6270 -30 3 1238 550 294 24 6 chr17 85690560 85690728 -9581923 + B3A SINE B2 2 172 -26 3 1238 261 75 0 0 chr17 85690730 85690770 -9581881 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1238 414 57 0 0 chr17 85691263 85691316 -9581335 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1238 276 211 36 71 chr17 85692170 85692282 -9580369 + MT2B LTR ERVL 157 264 -337 3 1238 753 78 78 0 chr17 85692187 85692303 -9580348 + B1_Mur3 SINE Alu 11 135 -14 3 1238 829 188 63 27 chr17 85696091 85696337 -9576314 + MER57A-int LTR ERV1 5804 5983 -204 3 1238 750 131 0 0 chr17 85696383 85696505 -9576146 + (TTC)n Simple_repeat Simple_repeat 1 122 0 3 1238 396 157 23 35 chr17 85696508 85696683 -9575968 + CT-rich Low_complexity Low_complexity 1 172 0 3 1238 904 202 89 25 chr17 85696728 85696931 -9575720 + B3 SINE B2 1 216 0 3 1238 350 358 42 46 chr17 85698191 85698428 -9574223 + L3 LINE CR1 3130 3365 -1124 3 1238 629 265 171 0 chr17 85698544 85698778 -9573873 + B4A SINE B4 8 281 -11 3 1238 597 99 11 0 chr17 85699647 85699738 -9572913 + B1_Mus2 SINE Alu 44 135 -12 3 1238 423 0 0 0 chr17 85699738 85699785 -9572866 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 3 1238 611 326 91 16 chr17 85700042 85700481 -9572170 - Lx8 LINE L1 -59 7414 6943 3 1238 1318 243 93 161 chr17 85700483 85701141 -9571510 - L1_Mur3 LINE L1 -27 5853 5248 3 1238 1247 41 7 0 chr17 85701141 85701288 -9571363 + B1_Mus1 SINE Alu 1 148 0 3 1238 1318 243 93 161 chr17 85701288 85701313 -9571338 - L1_Mur3 LINE L1 -633 5247 5247 3 1238 900 206 92 0 chr17 85701313 85701497 -9571154 - B3 SINE B2 -15 201 1 3 1238 1318 243 93 161 chr17 85701497 85701764 -9570887 - L1_Mur3 LINE L1 -633 5247 4966 3 1238 800 318 114 23 chr17 85701961 85702246 -9570405 - L1M4 LINE L1 -990 5156 4852 3 1238 378 0 0 0 chr17 85702246 85702288 -9570363 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1238 800 318 114 23 chr17 85702288 85702565 -9570086 - L1M4 LINE L1 -1295 4851 4543 3 1238 705 275 68 104 chr17 85702929 85703925 -9568726 - L1M4 LINE L1 -2542 3604 2687 3 1238 243 0 0 0 chr17 85703928 85703955 -9568696 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1238 845 324 10 27 chr17 85704527 85704598 -9568053 - B4A SINE B4 -2 290 223 3 1238 650 13 13 0 chr17 85704598 85704677 -9567974 + (TC)n Simple_repeat Simple_repeat 2 81 0 3 1238 390 219 169 34 chr17 85704677 85704795 -9567856 - B1_Mur1 SINE Alu -14 135 2 3 1238 845 324 10 27 chr17 85704795 85705017 -9567634 - B4A SINE B4 -70 222 2 3 1238 1243 222 104 32 chr17 85705366 85705711 -9566940 - ORR1D2 LTR MaLR 0 370 1 3 1238 1085 70 7 7 chr17 85706135 85706278 -9566373 + B1_Mus2 SINE Alu 5 147 0 3 1238 273 57 0 0 chr17 85706315 85706350 -9566301 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1238 501 17 0 0 chr17 85706352 85706410 -9566241 + (GA)n Simple_repeat Simple_repeat 1 58 0 3 1238 272 222 128 94 chr17 85706430 85706579 -9566072 - Charlie4a DNA MER1_type -6 502 349 3 1238 344 285 46 8 chr17 85706580 85706711 -9565940 + B4 SINE B4 2 137 -155 3 1238 231 36 0 0 chr17 85706752 85706780 -9565871 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 3 1238 271 291 0 12 chr17 85706824 85706904 -9565747 + (CATA)n Simple_repeat Simple_repeat 2 80 0 3 1238 252 0 0 0 chr17 85709079 85709107 -9563544 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 1238 417 70 0 0 chr17 85710307 85710364 -9562287 + (TG)n Simple_repeat Simple_repeat 1 57 0 3 1238 569 290 37 6 chr17 85710368 85710531 -9562120 - B3A SINE B2 -30 168 1 3 1238 22 56 0 0 chr17 85711553 85711589 -9561062 + AT_rich Low_complexity Low_complexity 1 36 0 3 1238 213 362 99 12 chr17 85712605 85712767 -9559884 - L2b LINE L2 -1 3374 3199 3 1238 470 235 162 96 chr17 85713504 85713702 -9558949 + B3 SINE B2 1 211 -5 3 1238 233 57 0 28 chr17 85713816 85713852 -9558799 + (GGA)n Simple_repeat Simple_repeat 2 36 0 3 1238 989 209 24 9 chr17 85714528 85714740 -9557911 - B3 SINE B2 0 216 2 3 1238 232 377 37 30 chr17 85715019 85715153 -9557498 - MamRep38 DNA hAT -141 154 20 3 1238 893 125 130 12 chr17 85716670 85716832 -9555819 + B2_Mm2 SINE B2 1 181 -14 3 1238 197 178 0 22 chr17 85719753 85719799 -9552852 + T-rich Low_complexity Low_complexity 5 49 0 3 1238 903 169 5 67 chr17 85720182 85720391 -9552260 + B3A SINE B2 2 197 -1 3 1238 537 202 9 0 chr17 85720545 85720659 -9551992 - B1F2 SINE Alu -10 139 25 3 1238 363 200 0 0 chr17 85720748 85720813 -9551838 - ID4 SINE ID -17 66 2 3 1239 189 0 0 0 chr17 85721900 85721921 -9550730 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 3 1239 533 196 10 0 chr17 85721930 85722032 -9550619 + B1_Mur1 SINE Alu 38 140 -9 3 1239 1041 182 13 67 chr17 85722064 85722288 -9550363 + B3 SINE B2 2 213 -3 3 1239 291 243 87 0 chr17 85722457 85722560 -9550091 - L1MC LINE L1 -1751 4395 4284 3 1239 552 234 50 0 chr17 85722621 85722762 -9549889 - MLT1A0 LTR MaLR 0 365 218 3 1239 332 321 30 12 chr17 85722769 85722936 -9549715 - L1M2 LINE L1 -513 5778 5609 3 1239 889 324 82 45 chr17 85722916 85723025 -9549626 - L1M5 LINE L1 -2173 3973 3875 3 1239 352 173 51 51 chr17 85723025 85723104 -9549547 - ID4_ SINE ID -2 81 3 3 1239 889 324 82 45 chr17 85723104 85723986 -9548665 - L1M5 LINE L1 -2272 3874 2946 3 1239 816 163 11 88 chr17 85723991 85724173 -9548478 - B2_Mm2 SINE B2 -26 169 2 3 1239 224 179 0 17 chr17 85724298 85724358 -9548293 - PB1D9 SINE Alu 0 120 70 3 1239 917 248 28 24 chr17 85724806 85725017 -9547634 + B3 SINE B2 1 212 -4 3 1239 243 0 0 0 chr17 85726030 85726057 -9546594 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 3 1239 810 139 0 0 chr17 85727233 85727370 -9545281 + (TTCTCC)n Simple_repeat Simple_repeat 3 139 0 3 1239 1284 255 56 30 chr17 85727669 85728062 -9544589 + MTD LTR MaLR 10 412 -7 3 1239 253 281 12 24 chr17 85728925 85729009 -9543642 - Tigger5 DNA MER2_type -1 2405 2323 3 1239 820 165 80 59 chr17 85729136 85729323 -9543328 - B2_Mm2 SINE B2 -4 191 1 3 1239 787 182 222 0 chr17 85729355 85729531 -9543120 - B3 SINE B2 0 216 2 3 1239 529 351 8 59 chr17 85729571 85729825 -9542826 - Tigger5 DNA MER2_type -2164 242 2 3 1239 269 251 152 16 chr17 85730130 85730256 -9542395 + MIRb SINE MIR 33 175 -87 3 1239 242 302 83 0 chr17 85731007 85731103 -9541548 + MIRb SINE MIR 35 138 -130 3 1239 191 36 0 35 chr17 85731138 85731167 -9541484 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 3 1239 3238 53 5 2 chr17 85733142 85733537 -9539114 - MTA_Mm LTR MaLR 0 396 1 3 1239 463 303 7 14 chr17 85733900 85734044 -9538607 + RSINE1 SINE B4 22 164 -1 3 1239 482 31 16 0 chr17 85734090 85734154 -9538497 + (GA)n Simple_repeat Simple_repeat 2 66 0 3 1239 674 195 201 0 chr17 85734179 85734353 -9538298 + B3 SINE B2 3 211 -5 3 1239 405 164 0 0 chr17 85734364 85734437 -9538214 + (TA)n Simple_repeat Simple_repeat 1 73 0 3 1239 818 186 7 0 chr17 85734569 85734709 -9537942 + B1_Mur1 SINE Alu 1 141 -8 3 1239 28 0 0 0 chr17 85735914 85735942 -9536709 + AT_rich Low_complexity Low_complexity 1 28 0 3 1239 917 156 210 0 chr17 85737570 85737756 -9534895 + URR1B DNA MER1_type 1 225 0 3 1239 260 376 34 33 chr17 85737781 85737931 -9534720 + MIR SINE MIR 36 183 -79 4 1239 194 91 0 29 chr17 85738284 85738318 -9534333 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 1239 497 293 72 30 chr17 85738383 85738647 -9534004 + B4A SINE B4 2 276 -16 4 1239 1098 124 53 11 chr17 85738864 85739051 -9533600 + B2_Mm2 SINE B2 1 195 0 4 1239 695 256 9 45 chr17 85739344 85739565 -9533086 - RMER15 LTR ERVL -1 574 362 4 1239 2080 254 95 14 chr17 85740179 85740874 -9531777 - Tigger6a DNA MER2_type -62 1021 271 4 1239 30 0 0 0 chr17 85741436 85741466 -9531185 + AT_rich Low_complexity Low_complexity 1 30 0 4 1239 364 245 54 0 chr17 85741600 85741708 -9530943 + B1F1 SINE Alu 5 117 -30 4 1239 204 246 17 17 chr17 85741711 85741769 -9530882 + MIRb SINE MIR 186 243 -25 4 1239 738 0 0 0 chr17 85742310 85742392 -9530259 + (TTCC)n Simple_repeat Simple_repeat 4 85 0 4 1239 1251 86 0 0 chr17 85742394 85742568 -9530083 + (TTTC)n Simple_repeat Simple_repeat 4 177 0 4 1239 1802 211 102 7 chr17 85743806 85744265 -9528386 + Lx9 LINE L1 7133 7635 -9 4 1239 643 290 87 15 chr17 85744603 85744869 -9527782 - B4A SINE B4 -6 286 2 4 1239 270 193 0 0 chr17 85747446 85747503 -9525148 + T-rich Low_complexity Low_complexity 1 57 0 4 1239 1272 105 5 30 chr17 85747515 85747712 -9524939 - B2_Mm1t SINE B2 -1 192 1 4 1239 1379 98 10 10 chr17 85747755 85747950 -9524701 + B2_Mm2 SINE B2 1 195 0 4 1239 360 0 0 0 chr17 85749653 85749693 -9522958 + (TAA)n Simple_repeat Simple_repeat 1 40 0 4 1239 615 108 0 0 chr17 85750580 85750673 -9521978 + (TG)n Simple_repeat Simple_repeat 2 94 0 4 1239 1064 201 34 19 chr17 85750689 85750897 -9521754 + B3 SINE B2 1 211 -5 4 1239 992 187 19 33 chr17 85752186 85752396 -9520255 - B3 SINE B2 -8 208 2 4 1239 392 292 14 36 chr17 85752756 85752937 -9519714 + MIR SINE MIR 1 181 -87 4 1239 22 56 0 0 chr17 85753501 85753537 -9519114 + AT_rich Low_complexity Low_complexity 1 36 0 4 1239 469 211 120 53 chr17 85753537 85753837 -9518814 - Charlie1a DNA MER1_type -1 1454 1135 4 1239 432 320 0 0 chr17 85753958 85754273 -9518378 + (CA)n Simple_repeat Simple_repeat 1 315 0 4 1239 360 303 0 0 chr17 85754284 85754462 -9518189 + (CA)n Simple_repeat Simple_repeat 1 178 0 4 1239 321 287 66 13 chr17 85754474 85754626 -9518025 - L1MA4 LINE L1 -374 5926 5767 4 1239 1533 248 176 4 chr17 85754645 85755099 -9517552 - Lx7 LINE L1 -288 7408 6877 4 1239 330 278 74 50 chr17 85755101 85755222 -9517429 - L1MA4 LINE L1 -517 5783 5660 4 1239 382 220 73 9 chr17 85755246 85755356 -9517295 - Charlie1b DNA MER1_type -239 284 168 4 1239 865 65 52 0 chr17 85755392 85755547 -9517104 + (ATG)n Simple_repeat Simple_repeat 1 163 0 4 1239 720 150 33 79 chr17 85755613 85755765 -9516886 + B1_Mus1 SINE Alu 2 146 -2 4 1239 1447 75 16 0 chr17 85755981 85756168 -9516483 - B2_Mm2 SINE B2 -5 190 1 4 1239 581 214 36 42 chr17 85756592 85756758 -9515893 + B3A SINE B2 14 178 -20 4 1239 1067 40 23 46 chr17 85756761 85757023 -9515628 + (CA)n Simple_repeat Simple_repeat 1 255 0 4 1239 368 40 20 0 chr17 85757042 85757092 -9515559 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1239 285 336 28 9 chr17 85758103 85758211 -9514440 + PB1D10 SINE Alu 1 110 -7 4 1239 366 314 86 36 chr17 85758278 85758418 -9514233 - Lx9 LINE L1 -2 7642 7498 4 1239 2665 60 36 0 chr17 85758418 85758752 -9513899 + ORR1A1 LTR MaLR 1 346 0 4 1239 366 314 86 36 chr17 85758752 85758889 -9513762 - Lx9 LINE L1 -147 7497 7352 4 1239 822 221 46 46 chr17 85759068 85759286 -9513365 - MTEa LTR MaLR -155 224 7 4 1239 193 279 218 11 chr17 85759386 85759560 -9513091 - L2a LINE L2 -35 3391 3182 4 1239 186 189 0 0 chr17 85760869 85760906 -9511745 + CT-rich Low_complexity Low_complexity 3 39 0 4 1239 207 0 0 0 chr17 85760909 85760932 -9511719 + (CA)n Simple_repeat Simple_repeat 1 23 0 4 1239 512 304 0 7 chr17 85760984 85761133 -9511518 - B4A SINE B4 -144 148 1 4 1239 446 284 94 35 chr17 85761245 85761766 -9510885 - L1M5 LINE L1 -402 5771 5197 4 1239 368 292 25 8 chr17 85761877 85761998 -9510653 - MER5A DNA MER1_type -36 153 31 4 1239 233 117 51 13 chr17 85762878 85762956 -9509695 + (CAAA)n Simple_repeat Simple_repeat 4 84 0 4 1239 378 0 0 0 chr17 85764056 85764098 -9508553 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1239 528 234 260 5 chr17 85764171 85764394 -9508257 + B4A SINE B4 1 280 -12 4 1239 1179 117 0 0 chr17 85764429 85764609 -9508042 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 1239 225 0 0 0 chr17 85764622 85764647 -9508004 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 1239 959 138 168 5 chr17 85766273 85766463 -9506188 - URR1B DNA MER1_type 0 225 5 4 1239 286 99 48 24 chr17 85766515 85766598 -9506053 + (TAGA)n Simple_repeat Simple_repeat 1 85 0 4 1239 695 153 8 8 chr17 85766695 85766814 -9505837 - PB1D9 SINE Alu -1 119 1 4 1239 554 298 0 75 chr17 85766827 85767041 -9505610 - B3A SINE B2 0 198 1 4 1239 324 0 0 0 chr17 85767226 85767262 -9505389 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1239 216 67 0 0 chr17 85767290 85767320 -9505331 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1239 245 203 60 45 chr17 85767325 85767392 -9505259 - Lx9 LINE L1 -1317 6156 6089 4 1239 618 232 156 6 chr17 85767526 85767699 -9504952 + MTD LTR MaLR 3 201 -218 4 1239 351 223 41 2 chr17 85767741 85767834 -9504817 + B1_Mur3 SINE Alu 46 142 -7 4 1239 193 167 37 0 chr17 85767842 85767896 -9504755 + G-rich Low_complexity Low_complexity 1 56 0 4 1239 540 203 107 21 chr17 85767899 85768103 -9504548 + MTD LTR MaLR 178 405 -14 4 1239 1587 292 96 70 chr17 85768120 85768825 -9503826 - Lx9 LINE L1 -1685 5959 5244 4 1239 198 0 0 0 chr17 85768825 85768847 -9503804 + (TG)n Simple_repeat Simple_repeat 2 23 0 4 1239 1587 287 94 78 chr17 85768847 85769070 -9503581 - Lx9 LINE L1 -637 5243 5013 4 1239 299 308 129 21 chr17 85769363 85769549 -9503102 - L1M2 LINE L1 -1061 5082 4877 4 1239 1446 134 87 130 chr17 85769793 85770186 -9502465 - ORR1C2 LTR MaLR -8 376 1 4 1239 1009 247 52 16 chr17 85770363 85770668 -9501983 - L1MB2 LINE L1 -104 6067 5752 4 1239 708 256 23 23 chr17 85772732 85772948 -9499703 + B3 SINE B2 1 216 0 4 1239 288 0 0 0 chr17 85775539 85775571 -9497080 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1239 263 85 0 21 chr17 85775860 85775908 -9496743 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 4 1239 705 118 0 0 chr17 85779636 85779755 -9492896 + (CA)n Simple_repeat Simple_repeat 1 119 0 4 1239 3031 34 3 0 chr17 85779804 85780160 -9492491 + L1Md_T LINE L1 6226 6582 0 4 1239 317 62 21 0 chr17 85780909 85780957 -9491694 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1239 396 216 230 13 chr17 85782227 85782406 -9490245 + ID_B1 SINE B4 7 221 -3 4 1239 543 260 0 0 chr17 85783196 85783323 -9489328 + (TGGG)n Simple_repeat Simple_repeat 1 127 0 4 1239 233 240 91 120 chr17 85784558 85784733 -9487918 - MIRb SINE MIR -20 248 79 4 1239 260 291 97 57 chr17 85785768 85785950 -9486701 - MIRc SINE MIR -70 198 17 4 1239 231 250 0 0 chr17 85785993 85786045 -9486606 - MIR SINE MIR -57 151 100 4 1239 25 31 0 0 chr17 85786748 85786780 -9485871 + AT_rich Low_complexity Low_complexity 1 32 0 4 1239 571 267 102 41 chr17 85786785 85787031 -9485620 + RMER15-int LTR ERVL 4268 4528 -471 4 1239 844 299 124 32 chr17 85787035 85787470 -9485181 + Lx8 LINE L1 6649 7123 -350 4 1239 259 280 109 23 chr17 85787542 85787670 -9484981 + Lx8 LINE L1 7154 7292 -181 4 1239 923 208 48 24 chr17 85788459 85788666 -9483985 - B3 SINE B2 0 216 5 4 1239 238 316 131 27 chr17 85789545 85789749 -9482902 - MIRc SINE MIR -48 214 8 4 1239 436 200 8 98 chr17 85790145 85790158 -9482493 + MT2B LTR ERVL 153 270 -328 4 1239 808 69 0 8 chr17 85790158 85790275 -9482376 + B1_Mm SINE Alu 2 117 -30 4 1239 297 253 75 21 chr17 85790203 85790296 -9482355 + RLTR25A LTR ERVK 522 619 -484 4 1239 180 0 0 0 chr17 85790492 85790512 -9482139 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 4 1239 270 56 0 0 chr17 85790652 85790688 -9481963 + (TTTTG)n Simple_repeat Simple_repeat 4 39 0 4 1239 315 71 0 0 chr17 85791279 85791321 -9481330 + (A)n Simple_repeat Simple_repeat 1 42 0 4 1239 184 30 61 0 chr17 85792290 85792323 -9480328 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 4 1239 306 0 0 0 chr17 85793122 85793156 -9479495 + (T)n Simple_repeat Simple_repeat 1 34 0 4 1239 660 26 0 0 chr17 85795363 85795441 -9477210 + (GA)n Simple_repeat Simple_repeat 1 78 0 4 1239 27 62 0 0 chr17 85796675 85796723 -9475928 + AT_rich Low_complexity Low_complexity 1 48 0 4 1239 864 168 156 0 chr17 85797287 85797466 -9475185 - B3 SINE B2 -4 212 6 4 1239 780 222 0 0 chr17 85797466 85797646 -9475005 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 4 1239 393 221 0 0 chr17 85797653 85797757 -9474894 + (TATATG)n Simple_repeat Simple_repeat 2 105 0 4 1239 459 52 0 0 chr17 85797759 85797817 -9474834 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 1239 412 214 36 0 chr17 85798009 85798093 -9474558 + PB1D10 SINE Alu 21 107 -10 4 1239 594 157 62 62 chr17 85798418 85798547 -9474104 + B1_Mus1 SINE Alu 19 147 -1 4 1239 639 60 0 0 chr17 85798551 85798635 -9474016 + (TAGA)n Simple_repeat Simple_repeat 1 84 0 4 1239 669 58 0 0 chr17 85799017 85799103 -9473548 + (TTTC)n Simple_repeat Simple_repeat 4 89 0 4 1239 422 256 118 17 chr17 85799157 85799236 -9473415 + B3 SINE B2 86 165 -51 4 1239 432 0 0 0 chr17 85799236 85799284 -9473367 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 1239 422 256 118 17 chr17 85799284 85799323 -9473328 + B3 SINE B2 166 215 -1 4 1239 323 298 9 28 chr17 85801919 85802026 -9470625 - MIR SINE MIR 0 262 158 4 1239 243 0 0 0 chr17 85803467 85803494 -9469157 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 4 1239 549 246 64 74 chr17 85803595 85803797 -9468854 + B4A SINE B4 1 200 -92 4 1239 459 87 0 0 chr17 85803843 85803912 -9468739 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 1239 1023 152 122 0 chr17 85804938 85805135 -9467516 - URR1A DNA MER1_type 0 226 6 5 1239 605 190 0 17 chr17 85805271 85805389 -9467262 - B1_Mur2 SINE Alu 0 149 34 5 1239 333 0 0 0 chr17 85805543 85805580 -9467071 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1239 1094 127 0 27 chr17 85806692 85806878 -9465773 - B2_Mm2 SINE B2 -13 182 2 5 1239 184 79 61 45 chr17 85808005 85808071 -9464580 + T-rich Low_complexity Low_complexity 5 71 0 5 1239 1191 41 0 0 chr17 85808072 85808217 -9464434 - B1_Mus2 SINE Alu -1 146 2 5 1239 282 256 11 58 chr17 85808225 85808312 -9464339 + ID_B1 SINE B4 15 97 -127 5 1239 204 67 0 0 chr17 85808358 85808388 -9464263 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 5 1239 492 128 245 0 chr17 85808410 85808512 -9464139 - B1_Mus1 SINE Alu -20 128 2 5 1239 591 204 97 13 chr17 85808515 85808669 -9463982 + B4 SINE B4 99 265 -27 5 1239 336 189 27 0 chr17 85809114 85809188 -9463463 - ID_B1 SINE B4 -41 183 108 5 1239 843 148 56 7 chr17 85809329 85809472 -9463179 - B1_Mur4 SINE Alu 0 150 1 5 1239 308 288 158 11 chr17 85809543 85809800 -9462851 - L1M5 LINE L1 -2083 4063 3757 5 1239 350 241 0 117 chr17 85809803 85809897 -9462754 - RSINE1 SINE B4 -1 164 82 5 1239 3255 74 95 0 chr17 85810006 85810492 -9462159 - RLTR47_MM LTR ERV1 0 532 1 5 1239 373 302 16 16 chr17 85810492 85810613 -9462038 - B4 SINE B4 -170 122 2 5 1239 861 122 8 15 chr17 85811155 85811288 -9461363 - B1_Mur3 SINE Alu -13 136 5 5 1239 711 255 129 10 chr17 85811576 85811770 -9460881 + B4 SINE B4 3 219 -73 5 1239 1361 87 32 0 chr17 85812452 85812637 -9460014 - B2_Mm2 SINE B2 -3 192 2 5 1239 588 29 0 0 chr17 85813360 85813430 -9459221 + (TG)n Simple_repeat Simple_repeat 2 71 0 5 1239 1646 234 49 6 chr17 85813523 85813889 -9458762 - ORR1C2 LTR MaLR -2 382 1 5 1239 963 181 77 10 chr17 85814327 85814522 -9458129 + B3 SINE B2 1 208 -8 5 1239 278 206 41 10 chr17 85814676 85814774 -9457877 + GA-rich Low_complexity Low_complexity 3 103 0 5 1239 856 70 0 23 chr17 85815234 85815365 -9457286 - MusHAL1 LINE L1 -2490 222 95 5 1239 1265 178 36 25 chr17 85815932 85816208 -9456443 - ORR1B2 LTR MaLR -5 362 84 5 1239 1141 292 56 55 chr17 85816236 85817073 -9455578 - L1MEc LINE L1 -410 5942 5079 5 1239 963 286 68 88 chr17 85817094 85817847 -9454804 - L1MEc LINE L1 -1640 4679 3906 5 1239 818 309 109 53 chr17 85817899 85818905 -9453746 - L1MEc LINE L1 -2908 3411 2349 5 1239 447 215 122 0 chr17 85818975 85819082 -9453569 - PB1 SINE Alu -7 120 1 5 1239 636 229 182 19 chr17 85819397 85819606 -9453045 - B4A SINE B4 -49 243 1 5 1239 529 239 203 35 chr17 85819686 85819942 -9452709 - L1MEc LINE L1 -4378 2022 1724 5 1239 1754 163 9 55 chr17 85819958 85820302 -9452349 - ORR1A4 LTR MaLR 0 329 2 5 1239 17304 98 253 2 chr17 85820565 85825168 -9447483 + L1_Mus3 LINE L1 779 6636 -2 5 1239 24 67 0 0 chr17 85825238 85825283 -9447368 + AT_rich Low_complexity Low_complexity 1 45 0 5 1239 1107 107 0 17 chr17 85825333 85825505 -9447146 + B2_Mm2 SINE B2 1 169 -26 5 1239 411 245 88 35 chr17 85825544 85825658 -9446993 - RSINE1 SINE B4 -44 121 2 5 1239 1138 298 111 84 chr17 85825659 85826632 -9446019 - L1MEc LINE L1 -5237 1163 129 5 1239 1047 102 0 0 chr17 85826632 85826809 -9445842 + (TG)n Simple_repeat Simple_repeat 1 177 0 5 1239 1138 298 111 84 chr17 85826809 85826936 -9445715 - L1MEc LINE L1 -6272 128 33 5 1239 425 364 52 52 chr17 85827032 85827125 -9445526 - L2a LINE L2 -5 3421 3330 5 1239 1786 168 111 23 chr17 85827125 85827478 -9445173 + ORR1C2 LTR MaLR 1 384 0 5 1239 425 364 52 52 chr17 85827478 85827868 -9444783 - L2a LINE L2 -97 3329 2939 5 1239 263 140 20 0 chr17 85827960 85828010 -9444641 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1239 597 198 157 0 chr17 85828010 85828131 -9444520 - B1_Mur2 SINE Alu -8 141 2 5 1239 365 262 87 7 chr17 85828132 85828282 -9444369 - L2a LINE L2 -595 2824 2663 5 1239 1394 46 40 6 chr17 85828642 85828816 -9443835 + B2_Mm2 SINE B2 2 181 -14 5 1239 263 175 0 17 chr17 85829287 85829345 -9443306 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1239 207 93 0 140 chr17 85829502 85829552 -9443099 + L2b LINE L2 3316 3358 -17 5 1239 1160 135 10 10 chr17 85829853 85830048 -9442603 + B2_Mm2 SINE B2 1 195 0 5 1239 23 0 0 0 chr17 85830097 85830120 -9442531 + AT_rich Low_complexity Low_complexity 1 23 0 5 1239 208 0 0 59 chr17 85830408 85830442 -9442209 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 5 1239 420 55 0 0 chr17 85832021 85832076 -9440575 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 1239 938 52 0 0 chr17 85834831 85834946 -9437705 + B1_Mm SINE Alu 33 147 0 5 1239 210 118 0 0 chr17 85834946 85834980 -9437671 + (A)n Simple_repeat Simple_repeat 1 34 0 5 1239 243 0 0 0 chr17 85835221 85835248 -9437403 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 1239 459 0 0 0 chr17 85835248 85835298 -9437353 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 1239 302 258 0 0 chr17 85836299 85836361 -9436290 + tRNA-Ala-GCG tRNA tRNA 4 65 -10 5 1239 206 216 0 0 chr17 85836380 85836417 -9436234 + polypyrimidine Low_complexity Low_complexity 1 37 0 5 1239 1168 176 12 86 chr17 85837418 85837661 -9434990 - URR1B DNA MER1_type 0 225 1 5 1239 330 320 40 10 chr17 85837662 85837763 -9434888 - MLT1A1 LTR MaLR -126 282 179 5 1239 566 82 12 0 chr17 85838002 85838087 -9434564 + (GGA)n Simple_repeat Simple_repeat 3 88 0 5 1239 1451 39 79 0 chr17 85838403 85838562 -9434089 + B2_Mm1t SINE B2 2 160 -33 5 1239 207 0 0 0 chr17 85838562 85838585 -9434066 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 5 1239 1451 39 79 0 chr17 85838585 85838603 -9434048 + B2_Mm1t SINE B2 161 191 -2 5 1239 399 279 72 31 chr17 85841302 85841444 -9431207 + B1F SINE Alu 2 144 -3 5 1239 278 345 0 22 chr17 85842968 85843060 -9429591 + RSINE1 SINE B4 4 93 -72 5 1239 491 250 0 73 chr17 85843070 85843221 -9429430 + ID_B1 SINE B4 64 203 -21 5 1239 864 114 8 0 chr17 85843101 85843224 -9429427 + B1_Mur4 SINE Alu 7 130 -20 5 1239 213 175 0 0 chr17 85843308 85843348 -9429303 + (TAA)n Simple_repeat Simple_repeat 2 41 0 5 1239 1178 89 54 0 chr17 85843531 85843699 -9428952 + B2_Mm2 SINE B2 5 181 -14 5 1239 280 274 16 0 chr17 85844193 85844255 -9428396 + B1F SINE Alu 71 133 -16 5 1239 720 181 114 51 chr17 85844326 85844501 -9428150 + RMER30 DNA MER1_type 16 201 -1 5 1239 233 297 86 90 chr17 85845108 85845449 -9427202 - L2c LINE L2 -18 3357 3020 5 1239 252 220 102 0 chr17 85845670 85845729 -9426922 + tRNA-Ala-GCY_ tRNA tRNA 2 66 -9 5 1239 612 40 0 0 chr17 85845735 85845810 -9426841 + (GGGA)n Simple_repeat Simple_repeat 3 77 0 5 1239 261 0 0 0 chr17 85845888 85845917 -9426734 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1239 599 0 14 0 chr17 85846297 85846368 -9426283 + (GA)n Simple_repeat Simple_repeat 2 73 0 5 1239 276 30 0 0 chr17 85846497 85846530 -9426121 + (TTCC)n Simple_repeat Simple_repeat 3 35 0 5 1239 324 64 0 0 chr17 85846530 85846577 -9426074 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 5 1239 1248 81 17 11 chr17 85846584 85846758 -9425893 - B2_Mm2 SINE B2 -19 176 2 5 1239 507 314 122 29 chr17 85847508 85847787 -9424864 - L2a LINE L2 -1 3425 3121 5 1239 198 103 0 0 chr17 85848110 85848139 -9424512 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1239 410 302 9 0 chr17 85849167 85849283 -9423368 + PB1D10 SINE Alu 1 117 0 5 1239 4578 130 34 25 chr17 85849910 85851213 -9421438 + Lx LINE L1 5246 6570 -12 5 1240 423 0 0 0 chr17 85853682 85853729 -9418922 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1240 387 191 234 9 chr17 85856073 85856184 -9416467 + B1_Mus2 SINE Alu 11 146 -1 5 1240 233 119 0 23 chr17 85856184 85856227 -9416424 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 5 1240 1051 101 7 13 chr17 85856541 85856691 -9415960 + B1_Mur3 SINE Alu 1 149 0 5 1240 21 57 0 0 chr17 85857346 85857381 -9415270 + AT_rich Low_complexity Low_complexity 1 35 0 5 1240 788 124 0 7 chr17 85858350 85858488 -9414163 + (GGAA)n Simple_repeat Simple_repeat 3 139 0 5 1240 234 47 0 23 chr17 85858512 85858556 -9414095 + L1Md_T LINE L1 6539 6581 -1 5 1240 479 263 43 43 chr17 85860062 85860225 -9412426 + RSINE1 SINE B4 3 165 0 5 1240 183 42 0 0 chr17 85860875 85860899 -9411752 + (TTGTG)n Simple_repeat Simple_repeat 3 26 0 5 1240 261 0 0 0 chr17 85860899 85860928 -9411723 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 1240 288 0 0 0 chr17 85862640 85862672 -9409979 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1240 180 0 0 0 chr17 85862673 85862693 -9409958 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1240 299 315 45 52 chr17 85865878 85865986 -9406665 + MLT1H2 LTR MaLR 104 213 -276 5 1240 2211 133 71 3 chr17 85865986 85866340 -9406311 - RLTR14 LTR ERV1 -3 379 2 5 1240 299 315 45 52 chr17 85866340 85866365 -9406286 + MLT1H2 LTR MaLR 214 236 -253 5 1240 548 220 250 6 chr17 85867933 85868093 -9404558 + ID_B1 SINE B4 23 221 -3 5 1240 284 242 30 14 chr17 85868862 85868976 -9403675 + Lx8 LINE L1 6957 7075 -621 5 1240 580 272 45 23 chr17 85868995 85869172 -9403479 + Lx8 LINE L1 7153 7333 -140 5 1240 734 287 64 0 chr17 85869199 85869401 -9403250 + B3 SINE B2 1 215 -1 5 1240 1103 117 194 6 chr17 85869529 85869709 -9402942 + B3 SINE B2 3 216 0 5 1240 229 295 128 49 chr17 85870266 85870469 -9402182 - L2 LINE L2 -460 2959 2741 5 1240 756 180 258 0 chr17 85871539 85871706 -9400945 + B3 SINE B2 1 210 -6 5 1240 29 0 0 0 chr17 85871710 85871739 -9400912 + AT_rich Low_complexity Low_complexity 1 29 0 5 1240 752 223 17 110 chr17 85871739 85871976 -9400675 - Lx6 LINE L1 -23 7437 7223 5 1240 309 272 39 10 chr17 85871996 85872100 -9400551 - PB1D9 SINE Alu -12 108 2 5 1240 394 296 48 30 chr17 85872100 85872176 -9400475 - ID SINE ID -145 79 1 6 1240 198 0 0 0 chr17 85872828 85872850 -9399801 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1240 254 282 12 60 chr17 85874895 85874978 -9397673 + ID4 SINE ID 1 79 -4 6 1240 652 216 138 17 chr17 85875511 85875685 -9396966 - RMER30 DNA MER1_type -1 201 7 6 1240 233 130 0 42 chr17 85875707 85875755 -9396896 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 6 1240 378 322 147 43 chr17 85875815 85875905 -9396746 + HAL1 LINE L1 1033 1140 -1367 6 1240 763 190 14 14 chr17 85875905 85876049 -9396602 + B1_Mur1 SINE Alu 5 148 -1 6 1240 378 322 147 43 chr17 85876049 85876374 -9396277 + HAL1 LINE L1 1141 1491 -1016 6 1240 353 250 70 0 chr17 85876905 85877005 -9395646 + B1_Mur4 SINE Alu 38 144 -6 6 1240 303 28 0 0 chr17 85877028 85877064 -9395587 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 6 1240 1510 0 0 22 chr17 85877064 85877248 -9395403 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 6 1240 203 79 26 0 chr17 85877267 85877305 -9395346 + (GA)n Simple_repeat Simple_repeat 2 40 0 6 1240 27 29 0 0 chr17 85877314 85877348 -9395303 + AT_rich Low_complexity Low_complexity 1 34 0 6 1240 298 282 46 23 chr17 85877514 85877601 -9395050 + ID_B1 SINE B4 3 91 -133 6 1240 391 235 95 75 chr17 85877800 85877947 -9394704 + RSINE1 SINE B4 6 155 -10 6 1240 412 279 8 75 chr17 85878032 85878152 -9394499 - PB1D7 SINE Alu -7 113 2 6 1240 189 94 0 0 chr17 85878227 85878259 -9394392 + (T)n Simple_repeat Simple_repeat 1 32 0 6 1240 1263 41 0 0 chr17 85878259 85878406 -9394245 - B1_Mus1 SINE Alu 0 148 2 6 1240 1403 94 16 5 chr17 85879008 85879201 -9393450 - B2_Mm2 SINE B2 0 195 1 6 1240 416 295 23 116 chr17 85879211 85879245 -9393406 - B2_Mm2 SINE B2 0 195 165 6 1240 279 0 0 0 chr17 85879245 85879276 -9393375 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1240 691 292 12 22 chr17 85879276 85879456 -9393195 - B3 SINE B2 -46 170 1 6 1240 191 88 29 0 chr17 85879802 85879836 -9392815 + (TTG)n Simple_repeat Simple_repeat 2 36 0 6 1240 840 121 56 14 chr17 85879840 85879982 -9392669 - B1_Mur4 SINE Alu -1 149 2 6 1240 411 179 309 0 chr17 85880216 85880339 -9392312 + URR1B DNA MER1_type 1 161 -64 6 1240 672 198 95 0 chr17 85880343 85880469 -9392182 - B1_Mus2 SINE Alu -1 146 9 6 1240 473 140 0 55 chr17 85880477 85880568 -9392083 + URR1B DNA MER1_type 140 225 0 6 1240 216 319 29 0 chr17 85880599 85880668 -9391983 + ID2 SINE ID 2 72 -11 6 1240 239 266 0 59 chr17 85880849 85880917 -9391734 - MLT1H-int LTR MaLR -788 621 558 6 1240 207 0 0 0 chr17 85883008 85883031 -9389620 + (TTA)n Simple_repeat Simple_repeat 2 24 0 6 1240 279 255 42 36 chr17 85883402 85883501 -9389150 - PB1D10 SINE Alu -29 120 13 6 1240 585 0 0 0 chr17 85883860 85883925 -9388726 + (TA)n Simple_repeat Simple_repeat 2 66 0 6 1240 297 75 0 0 chr17 85884765 85884805 -9387846 + (TTCCC)n Simple_repeat Simple_repeat 5 44 0 6 1240 225 0 0 0 chr17 85884944 85884969 -9387682 + (TC)n Simple_repeat Simple_repeat 1 25 0 6 1240 21 36 0 0 chr17 85886027 85886055 -9386596 + GC_rich Low_complexity Low_complexity 1 28 0 6 1240 207 0 0 0 chr17 85886684 85886707 -9385944 + (T)n Simple_repeat Simple_repeat 1 23 0 6 1240 25 51 0 0 chr17 85887635 85887674 -9384977 + AT_rich Low_complexity Low_complexity 1 39 0 6 1240 293 102 0 17 chr17 85889987 85890047 -9382604 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 6 1240 630 0 0 0 chr17 85890749 85890819 -9381832 + (GA)n Simple_repeat Simple_repeat 1 70 0 6 1240 250 252 43 77 chr17 85891656 85891804 -9380847 - L1MB7 LINE L1 0 6184 6048 6 1240 25 0 0 0 chr17 85891919 85891944 -9380707 + AT_rich Low_complexity Low_complexity 1 25 0 6 1240 28 29 0 0 chr17 85891962 85891997 -9380654 + AT_rich Low_complexity Low_complexity 1 35 0 6 1240 314 303 35 35 chr17 85892553 85892666 -9379985 + PB1D10 SINE Alu 3 115 -2 6 1240 24 67 0 0 chr17 85892669 85892714 -9379937 + AT_rich Low_complexity Low_complexity 1 45 0 6 1240 248 254 17 0 chr17 85892993 85893052 -9379599 + MIRm SINE MIR 86 145 -131 6 1240 234 0 0 0 chr17 85893168 85893194 -9379457 + (CAAAC)n Simple_repeat Simple_repeat 3 28 0 6 1240 253 303 33 11 chr17 85894192 85894282 -9378369 + MLT1A1 LTR MaLR 23 114 -294 6 1240 328 263 117 17 chr17 85894713 85894833 -9377818 + MTE-int LTR MaLR 336 467 -1113 6 1240 2182 207 30 81 chr17 85895029 85895108 -9377543 + RMER19C LTR ERVK 1 79 -532 6 1240 295 0 53 35 chr17 85895108 85895165 -9377486 + (TTTTG)n Simple_repeat Simple_repeat 4 61 0 6 1240 2182 207 30 81 chr17 85895165 85895716 -9376935 + RMER19C LTR ERVK 80 598 -13 6 1240 740 361 26 6 chr17 85895894 85896245 -9376406 + MTE-int LTR MaLR 1006 1363 -217 6 1240 12239 105 9 82 chr17 85896338 85899670 -9372981 - L1VL4 LINE L1 0 3914 1077 6 1240 1230 103 11 0 chr17 85899670 85899854 -9372797 + L1_Mus3 LINE L1 6441 6626 -12 6 1240 3704 84 28 68 chr17 85899854 85900160 -9372491 - L1VL4 LINE L1 -5581 1076 768 6 1240 557 258 87 1 chr17 85900164 85900335 -9372316 + MTE-int LTR MaLR 1334 1538 -42 6 1240 1452 273 76 28 chr17 85901442 85902062 -9370589 - L1MB4 LINE L1 -9 6171 5511 6 1240 1234 50 0 0 chr17 85902579 85902739 -9369912 - B2_Mm2 SINE B2 -35 160 1 6 1240 3427 194 103 72 chr17 85902805 85903646 -9369005 + RLTR25B LTR ERVK 1 885 -143 6 1240 279 0 0 0 chr17 85903646 85903677 -9368974 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1240 3427 194 103 72 chr17 85903677 85903832 -9368819 + RLTR25B LTR ERVK 886 1028 0 6 1240 1298 117 168 66 chr17 85903934 85904208 -9368443 + Lx2B LINE L1 6699 7000 0 6 1240 959 70 41 19 chr17 85904239 85904659 -9367992 + (TG)n Simple_repeat Simple_repeat 1 429 0 6 1240 22 56 0 0 chr17 85905433 85905469 -9367182 + AT_rich Low_complexity Low_complexity 1 36 0 6 1240 562 220 40 23 chr17 85907229 85907406 -9365245 - MER53 DNA hAT -7 186 7 6 1240 500 142 40 200 chr17 85907736 85907886 -9364765 - B1_Mus1 SINE Alu -21 127 2 6 1240 209 232 18 0 chr17 85908325 85908381 -9364270 - MIR SINE MIR -100 162 106 6 1240 624 237 50 25 chr17 85908387 85908547 -9364104 + RSINE1 SINE B4 2 165 0 6 1240 390 230 0 0 chr17 85908547 85908695 -9363956 + (CA)n Simple_repeat Simple_repeat 1 148 0 6 1240 603 201 0 0 chr17 85908736 85908915 -9363736 + (CA)n Simple_repeat Simple_repeat 1 179 0 6 1240 291 256 0 0 chr17 85908932 85909049 -9363602 + (CA)n Simple_repeat Simple_repeat 1 117 0 6 1240 922 89 89 0 chr17 85909731 85909866 -9362785 - B1_Mus1 SINE Alu -1 147 1 6 1240 1263 94 0 0 chr17 85909901 85910081 -9362570 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 1240 963 41 0 0 chr17 85910085 85910207 -9362444 - B1_Mus1 SINE Alu -12 136 15 6 1240 1086 126 64 27 chr17 85910226 85910414 -9362237 - B2_Mm2 SINE B2 0 195 1 6 1240 441 95 0 0 chr17 85912045 85912108 -9360543 + (TTA)n Simple_repeat Simple_repeat 1 63 0 6 1240 348 333 42 8 chr17 85912680 85912798 -9359853 + B4A SINE B4 2 123 -169 6 1240 1283 82 16 0 chr17 85912796 85912980 -9359671 - B2_Mm2 SINE B2 -2 193 7 6 1240 850 301 67 43 chr17 85914654 85914945 -9357706 - Charlie1b DNA MER1_type -39 484 195 6 1240 360 0 0 0 chr17 85914945 85914985 -9357666 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 6 1240 1141 58 0 0 chr17 85914985 85915123 -9357528 - B1_Mus1 SINE Alu -9 139 2 6 1240 850 301 67 43 chr17 85915123 85915292 -9357359 - Charlie1b DNA MER1_type -329 194 13 6 1240 290 178 0 0 chr17 85915313 85915358 -9357293 - ID4 SINE ID -16 67 23 6 1240 468 0 0 0 chr17 85915395 85915447 -9357204 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 1240 235 229 49 0 chr17 85915792 85915853 -9356798 + MIRm SINE MIR 108 171 -105 6 1240 735 191 32 20 chr17 85918597 85918782 -9353869 - B3 SINE B2 -4 189 1 6 1240 852 247 86 84 chr17 85919214 85919642 -9353009 + RMER10A LTR ERVL 1 429 -13 6 1240 270 0 0 0 chr17 85920669 85920699 -9351952 + (GGA)n Simple_repeat Simple_repeat 2 31 0 6 1240 285 297 262 15 chr17 85921359 85921630 -9351021 - ORR1E LTR MaLR -21 338 1 6 1240 338 190 38 0 chr17 85921669 85921748 -9350903 + MER82 DNA MER2_type 143 224 -429 6 1240 568 182 7 66 chr17 85922060 85922202 -9350449 + ORR1D1 LTR MaLR 1 125 -269 6 1240 707 249 165 2 chr17 85922339 85922609 -9350042 + ORR1D1 LTR MaLR 66 365 -9 6 1240 219 241 11 46 chr17 85924108 85924195 -9348456 + CT-rich Low_complexity Low_complexity 5 88 0 6 1240 195 42 0 0 chr17 85924195 85924219 -9348432 + (TTTCC)n Simple_repeat Simple_repeat 1 24 0 6 1240 1182 112 0 0 chr17 85924229 85924407 -9348244 + (TCTCC)n Simple_repeat Simple_repeat 1 178 0 6 1240 836 155 13 0 chr17 85924408 85924563 -9348088 + CT-rich Low_complexity Low_complexity 4 160 0 6 1240 207 100 0 0 chr17 85924556 85924586 -9348065 + (TCC)n Simple_repeat Simple_repeat 1 30 0 6 1240 767 136 67 22 chr17 85924609 85924744 -9347907 - B1_Mur4 SINE Alu -9 141 1 6 1240 1233 256 31 61 chr17 85924750 85925075 -9347576 - Lx9 LINE L1 -377 7267 6951 6 1240 1170 144 39 77 chr17 85925075 85925308 -9347343 - URR1B DNA MER1_type -1 224 1 6 1240 1233 256 31 61 chr17 85925308 85925373 -9347278 - Lx9 LINE L1 -694 6950 6889 6 1240 414 0 0 0 chr17 85927302 85927348 -9345303 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1240 243 0 0 0 chr17 85929414 85929441 -9343210 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1240 837 177 6 0 chr17 85931073 85931231 -9341420 + URR1B DNA MER1_type 66 224 -1 6 1240 595 287 82 56 chr17 85931617 85931829 -9340822 - L1MB3 LINE L1 -7 6176 5958 6 1240 1125 172 33 23 chr17 85931829 85932043 -9340608 - B3 SINE B2 0 216 1 6 1240 595 287 82 56 chr17 85932043 85932133 -9340518 - L1MB3 LINE L1 -226 5957 5866 6 1240 782 261 24 15 chr17 85932151 85932357 -9340294 - B3 SINE B2 -7 209 2 6 1240 313 324 63 21 chr17 85932487 85932700 -9339951 + MIR SINE MIR 15 240 -28 6 1240 381 153 0 0 chr17 85932978 85933050 -9339601 + (TGG)n Simple_repeat Simple_repeat 3 74 0 6 1240 455 208 76 38 chr17 85933201 85933306 -9339345 + B1F SINE Alu 12 120 0 6 1240 206 62 31 0 chr17 85933309 85933341 -9339310 + (CACAG)n Simple_repeat Simple_repeat 4 36 0 6 1240 416 183 40 0 chr17 85935103 85935204 -9337447 + BC1_Mm scRNA scRNA 2 106 -46 6 1240 1053 127 0 0 chr17 85935234 85935400 -9337251 + (GGGA)n Simple_repeat Simple_repeat 2 167 0 7 1240 21567 140 33 7 chr17 85935572 85939079 -9333572 - Lx5 LINE L1 0 7050 3482 7 1240 198 0 0 0 chr17 85939079 85939101 -9333550 + (TTG)n Simple_repeat Simple_repeat 3 24 0 7 1240 21567 135 40 6 chr17 85939101 85940368 -9332283 - Lx5 LINE L1 -2396 3481 2140 7 1240 5296 134 12 56 chr17 85942136 85942280 -9330371 - Lx5 LINE L1 -3695 2182 2056 7 1240 333 0 0 0 chr17 85942280 85942317 -9330334 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 1240 5296 149 23 54 chr17 85942317 85943528 -9329123 - Lx5 LINE L1 -3822 2055 870 7 1240 1599 268 67 38 chr17 85943825 85944481 -9328170 + Lx9 LINE L1 6940 7614 -30 7 1240 257 0 0 29 chr17 85944481 85944515 -9328136 + (TTTAA)n Simple_repeat Simple_repeat 1 33 0 7 1240 362 330 23 70 chr17 85944717 85944932 -9327719 + L1ME3B LINE L1 5819 6023 -217 7 1240 368 303 158 31 chr17 85945050 85945278 -9327373 - ORR1E LTR MaLR -11 348 92 7 1240 5132 33 0 22 chr17 85945667 85946288 -9326363 - L1Md_F2 LINE L1 -4 6578 5972 7 1240 711 161 0 0 chr17 85947032 85947169 -9325482 + (TG)n Simple_repeat Simple_repeat 1 137 0 7 1240 408 71 0 0 chr17 85947168 85947224 -9325427 + (GA)n Simple_repeat Simple_repeat 1 56 0 7 1240 516 218 0 0 chr17 85947248 85947381 -9325270 + (TG)n Simple_repeat Simple_repeat 1 133 0 7 1240 353 263 143 104 chr17 85947431 85947711 -9324940 - B4 SINE B4 -1 291 1 7 1240 628 259 121 51 chr17 85947766 85948039 -9324612 + B4A SINE B4 1 292 0 7 1240 423 208 99 50 chr17 85948504 85948605 -9324046 + B1_Mus1 SINE Alu 2 107 -41 7 1240 545 233 59 20 chr17 85948597 85948750 -9323901 + ORR1C2 LTR MaLR 226 384 0 7 1240 2327 231 106 73 chr17 85948885 85949841 -9322810 - RMER17B LTR ERVK -12 946 1 7 1240 425 327 56 34 chr17 85950439 85950708 -9321943 - B4 SINE B4 -17 275 1 7 1240 253 333 36 45 chr17 85950753 85950863 -9321788 + MLT1J-int LTR MaLR 1219 1327 -60 7 1240 322 219 16 0 chr17 85951325 85951389 -9321262 + ID_B1 SINE B4 144 208 -16 7 1240 587 177 111 34 chr17 85951593 85951710 -9320941 + B1_Mur3 SINE Alu 1 126 -23 7 1240 704 100 8 0 chr17 85951733 85951853 -9320798 + (CA)n Simple_repeat Simple_repeat 1 121 0 7 1240 315 250 25 12 chr17 85952237 85952318 -9320333 - ID4 SINE ID -1 82 1 7 1240 196 26 0 116 chr17 85953258 85953301 -9319350 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 7 1240 721 197 58 0 chr17 85953957 85954094 -9318557 - B1_Mus2 SINE Alu -1 146 2 7 1240 353 346 62 67 chr17 85954094 85954153 -9318498 - B4A SINE B4 -204 88 31 7 1240 2295 147 81 10 chr17 85954432 85954825 -9317826 + MTC LTR MaLR 1 421 0 7 1240 560 75 37 19 chr17 85955198 85955306 -9317345 + (TTTC)n Simple_repeat Simple_repeat 1 110 0 7 1240 800 186 0 0 chr17 85955323 85955447 -9317204 - B1_Mus1 SINE Alu -17 131 8 7 1240 241 279 0 0 chr17 85955602 85955663 -9316988 + T-rich Low_complexity Low_complexity 1 61 0 7 1240 405 273 8 0 chr17 85956473 85956594 -9316057 + HAL1 LINE L1 1550 1671 -836 7 1240 234 310 150 55 chr17 85956761 85957235 -9315416 + HAL1 LINE L1 1738 2256 -251 7 1240 526 235 43 0 chr17 85957235 85957350 -9315301 + RSINE1 SINE B4 4 123 -42 7 1240 754 263 40 50 chr17 85957361 85957533 -9315118 + B3A SINE B2 1 174 -24 7 1240 375 23 0 0 chr17 85957533 85957577 -9315074 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 1240 754 263 40 50 chr17 85957577 85957604 -9315047 + B3A SINE B2 175 198 0 7 1240 526 263 62 82 chr17 85957621 85957927 -9314724 - Lx9 LINE L1 0 7644 7345 7 1240 27 0 0 0 chr17 85957984 85958011 -9314640 + AT_rich Low_complexity Low_complexity 1 27 0 7 1240 933 177 172 0 chr17 85958208 85958400 -9314251 + URR1B DNA MER1_type 1 225 0 7 1240 308 145 29 0 chr17 85959651 85959720 -9312931 + (CAGA)n Simple_repeat Simple_repeat 2 72 0 7 1240 214 296 43 54 chr17 85959752 85959845 -9312806 + MIR SINE MIR 99 190 -72 7 1240 2596 125 15 17 chr17 85960763 85961171 -9311480 - MTB_Mm LTR MaLR 0 407 1 7 1240 2042 151 32 11 chr17 85961301 85961649 -9311002 + RLTR15 LTR ERVK 1 355 -4 7 1240 23 0 0 0 chr17 85962673 85962696 -9309955 + AT_rich Low_complexity Low_complexity 1 23 0 7 1240 208 233 100 0 chr17 85963156 85963216 -9309435 - L2b LINE L2 -14 3361 3296 7 1240 183 347 0 0 chr17 85963972 85964021 -9308630 + MIR SINE MIR 73 121 -87 7 1240 289 155 4 0 chr17 85964056 85964108 -9308543 + B1_Mur4 SINE Alu 1 55 -95 7 1240 1098 151 0 22 chr17 85964126 85964482 -9308169 + (CAGAGA)n Simple_repeat Simple_repeat 1 348 0 7 1240 260 192 66 66 chr17 85964483 85964589 -9308062 + RLTR25B LTR ERVK 397 502 -526 7 1240 697 152 0 0 chr17 85964527 85964632 -9308019 + B1_Mus2 SINE Alu 42 146 -1 7 1240 387 105 0 0 chr17 85964862 85964919 -9307732 + (TTTA)n Simple_repeat Simple_repeat 4 60 0 7 1240 4419 148 60 134 chr17 85964958 85965345 -9307306 - RMER19B LTR ERVK -5 897 524 7 1240 1232 48 0 7 chr17 85965345 85965493 -9307158 - B1_Mus2 SINE Alu 0 147 1 7 1240 4419 148 60 134 chr17 85965493 85966074 -9306577 - RMER19B LTR ERVK -379 523 1 7 1240 603 271 0 0 chr17 85966074 85966196 -9306455 - RSINE1 SINE B4 -43 122 1 7 1240 231 281 149 63 chr17 85966202 85966237 -9306414 - B2_Mm2 SINE B2 -3 192 144 7 1240 296 77 19 0 chr17 85966237 85966289 -9306362 + (TG)n Simple_repeat Simple_repeat 1 53 0 7 1240 395 296 108 29 chr17 85966289 85966428 -9306223 - B3A SINE B2 -64 152 3 7 1240 189 273 14 57 chr17 85966628 85966698 -9305953 - L2 LINE L2 -3318 101 35 7 1240 334 351 57 40 chr17 85966791 85966966 -9305685 - MIRb SINE MIR -14 254 77 7 1240 463 299 54 0 chr17 85968127 85968274 -9304377 - MIRb SINE MIR -24 244 90 7 1240 252 100 0 0 chr17 85968292 85968332 -9304319 + (TCTA)n Simple_repeat Simple_repeat 1 40 0 7 1240 869 154 0 6 chr17 85968333 85968496 -9304155 + CT-rich Low_complexity Low_complexity 4 165 0 7 1240 867 258 9 14 chr17 85968502 85968718 -9303933 - ID_B1 SINE B4 -9 215 1 7 1240 540 252 15 15 chr17 85968754 85968887 -9303764 - ID_B1 SINE B4 -7 217 85 7 1240 213 242 27 151 chr17 85970263 85970336 -9302315 + B1F1 SINE Alu 46 109 -40 7 1240 328 282 0 23 chr17 85970320 85970407 -9302244 + B1_Mur1 SINE Alu 65 149 0 7 1240 321 208 50 38 chr17 85970552 85970632 -9302019 + MER117 DNA MER1_type 109 189 -8 7 1240 342 0 0 0 chr17 85970864 85970902 -9301749 + (TC)n Simple_repeat Simple_repeat 1 38 0 7 1240 716 182 0 4 chr17 85970903 85971177 -9301474 + (CA)n Simple_repeat Simple_repeat 1 272 0 7 1240 778 236 65 20 chr17 85972359 85972558 -9300093 + ID_B1 SINE B4 3 210 -14 7 1240 663 310 65 18 chr17 85972611 85972887 -9299764 + B4 SINE B4 2 290 -2 7 1240 217 216 0 0 chr17 85972931 85972968 -9299683 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1240 184 186 256 0 chr17 85973160 85973203 -9299448 + MIRc SINE MIR 90 143 -125 7 1240 601 273 0 15 chr17 85974620 85974750 -9297901 + B1_Mur1 SINE Alu 9 136 -13 7 1240 1182 73 0 0 chr17 85975059 85975238 -9297413 + (CA)n Simple_repeat Simple_repeat 1 179 0 7 1240 188 35 35 0 chr17 85975366 85975395 -9297256 + (CAA)n Simple_repeat Simple_repeat 2 31 0 7 1240 619 229 56 14 chr17 85976074 85976216 -9296435 + B1_Mur1 SINE Alu 1 148 -1 7 1240 319 300 120 0 chr17 85976267 85976367 -9296284 + PB1D7 SINE Alu 7 118 -2 7 1240 207 0 0 0 chr17 85976759 85976782 -9295869 + (T)n Simple_repeat Simple_repeat 1 23 0 7 1240 643 178 8 33 chr17 85976792 85976914 -9295737 - PB1D9 SINE Alu -1 119 1 7 1240 318 87 0 0 chr17 85976974 85977020 -9295631 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1240 259 340 37 94 chr17 85977090 85977418 -9295233 - RMER12 LTR ERVK -247 1075 767 7 1240 396 111 0 0 chr17 85977421 85977484 -9295167 + (CA)n Simple_repeat Simple_repeat 2 64 0 7 1240 507 33 0 0 chr17 85980025 85980086 -9292565 + (TG)n Simple_repeat Simple_repeat 1 61 0 7 1240 385 299 68 72 chr17 85980098 85980390 -9292261 - B4A SINE B4 0 292 2 7 1240 450 0 0 0 chr17 85981073 85981123 -9291528 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 1240 665 350 9 0 chr17 85981126 85981343 -9291308 - ID_B1 SINE B4 0 224 6 7 1240 791 231 14 51 chr17 85982183 85982397 -9290254 + B3 SINE B2 3 208 -8 7 1240 251 299 43 61 chr17 85982593 85982757 -9289894 + B4A SINE B4 32 192 -100 7 1240 349 279 35 0 chr17 85982907 85982993 -9289658 + B1_Mur4 SINE Alu 13 101 -49 7 1241 208 327 206 28 chr17 85983352 85983604 -9289047 + L2a LINE L2 3112 3408 -18 7 1241 223 255 0 0 chr17 85983583 85983630 -9289021 + MIR SINE MIR 198 244 -18 7 1241 221 261 7 7 chr17 85983611 85983669 -9288982 + MIR SINE MIR 198 259 -9 7 1241 203 250 0 0 chr17 85983680 85983720 -9288931 + MIR SINE MIR 205 244 -18 7 1241 228 239 0 0 chr17 85983703 85983749 -9288902 + MIR SINE MIR 198 243 -19 7 1241 468 0 0 0 chr17 85984683 85984735 -9287916 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 1241 818 271 68 53 chr17 85984781 85985041 -9287610 - B4 SINE B4 -7 285 21 7 1241 1990 103 123 67 chr17 85985041 85985414 -9287237 - ORR1B1 LTR MaLR 0 394 1 7 1241 818 271 68 53 chr17 85985414 85985434 -9287217 - B4 SINE B4 -272 20 1 7 1241 333 0 0 0 chr17 85985575 85985612 -9287039 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 7 1241 243 79 0 0 chr17 85986029 85986067 -9286584 + (T)n Simple_repeat Simple_repeat 1 38 0 7 1241 189 180 0 0 chr17 85986163 85986213 -9286438 + CT-rich Low_complexity Low_complexity 2 51 0 7 1241 314 301 8 103 chr17 85986257 85986383 -9286268 - ID_B1 SINE B4 -1 223 110 7 1241 265 331 52 97 chr17 85986383 85986411 -9286240 - B1F1 SINE Alu -1 148 2 7 1241 1336 301 131 52 chr17 85986636 85987368 -9285283 + Lx8 LINE L1 6233 7022 -451 8 1241 900 109 7 28 chr17 85987430 85987571 -9285080 - B1_Mus1 SINE Alu -8 140 3 8 1241 313 219 27 0 chr17 85987634 85987707 -9284944 + ID4_ SINE ID 1 75 -8 8 1241 491 45 15 0 chr17 85987729 85987795 -9284856 + (GGGA)n Simple_repeat Simple_repeat 3 69 0 8 1241 1203 79 0 0 chr17 85987909 85988073 -9284578 + (TTTC)n Simple_repeat Simple_repeat 1 164 0 8 1241 341 344 53 38 chr17 85988093 85988226 -9284425 - ID_B1 SINE B4 -8 216 82 8 1241 396 0 0 0 chr17 85988319 85988363 -9284288 + (TTG)n Simple_repeat Simple_repeat 2 45 0 8 1241 218 232 17 67 chr17 85988376 85988436 -9284215 - B1F2 SINE Alu -90 59 3 8 1241 917 124 22 0 chr17 85988448 85988585 -9284066 - B1_Mur3 SINE Alu -1 148 9 8 1241 1140 41 0 0 chr17 85988730 85988876 -9283775 + (CTGGGG)n Simple_repeat Simple_repeat 3 148 0 8 1241 894 111 0 0 chr17 85988876 85989002 -9283649 + B2_Mm2 SINE B2 9 134 -61 8 1241 31 44 0 0 chr17 85989535 85989580 -9283071 + AT_rich Low_complexity Low_complexity 1 45 0 8 1241 216 378 53 26 chr17 85989613 85989765 -9282886 - MER5B DNA MER1_type -3 175 20 8 1241 1894 204 13 217 chr17 85990069 85990816 -9281835 - RMER19C LTR ERVK -1 610 20 8 1241 280 41 61 0 chr17 85990816 85990865 -9281786 + (CAAA)n Simple_repeat Simple_repeat 2 53 0 8 1241 1894 204 13 217 chr17 85990865 85990881 -9281770 - RMER19C LTR ERVK -592 19 4 8 1241 215 103 26 0 chr17 85990883 85990922 -9281729 + (TTTTTA)n Simple_repeat Simple_repeat 2 41 0 8 1241 854 159 205 6 chr17 85990933 85991104 -9281547 - B3 SINE B2 -10 206 2 8 1241 371 256 13 0 chr17 85991135 85991213 -9281438 + ID4 SINE ID 5 83 0 8 1241 27 29 0 0 chr17 85991773 85991807 -9280844 + AT_rich Low_complexity Low_complexity 1 34 0 8 1241 510 287 83 33 chr17 85992003 85992183 -9280468 + MER5A DNA MER1_type 1 189 0 8 1241 187 279 82 0 chr17 85992191 85992252 -9280399 - MIR SINE MIR -56 152 87 8 1241 946 140 0 34 chr17 85992416 85992564 -9280087 + B1_Mur4 SINE Alu 2 144 -6 8 1241 963 50 0 0 chr17 85992566 85992687 -9279964 + (TAGA)n Simple_repeat Simple_repeat 1 121 0 8 1241 384 82 0 0 chr17 85992711 85992772 -9279879 + (CAGA)n Simple_repeat Simple_repeat 2 62 0 8 1241 1929 101 101 3 chr17 85993062 85993359 -9279292 + ORR1A3 LTR MaLR 1 326 0 8 1241 762 207 201 0 chr17 85993971 85994145 -9278506 - B3 SINE B2 -6 210 2 8 1241 267 250 29 29 chr17 85994296 85994366 -9278285 - PB1D10 SINE Alu -7 110 41 8 1241 225 277 268 0 chr17 85995756 85995868 -9276783 - MER58B DNA MER1_type -12 329 188 8 1241 264 186 98 49 chr17 85996749 85996851 -9275800 + RLTR25B LTR ERVK 398 504 -524 8 1241 659 167 0 26 chr17 85996777 85996894 -9275757 + B1_Mur3 SINE Alu 34 147 -2 8 1241 192 77 0 0 chr17 85996896 85996922 -9275729 + (CAA)n Simple_repeat Simple_repeat 2 27 0 8 1241 189 245 0 0 chr17 85996935 85996984 -9275667 + A-rich Low_complexity Low_complexity 4 52 0 8 1241 225 0 0 0 chr17 85997646 85997671 -9274980 + (T)n Simple_repeat Simple_repeat 1 25 0 8 1241 694 194 15 8 chr17 85998113 85998243 -9274408 + B1_Mur1 SINE Alu 3 133 -16 8 1241 227 233 0 23 chr17 85998299 85998343 -9274308 + tRNA-Ala-GCY_ tRNA tRNA 28 70 -5 8 1241 213 39 0 0 chr17 85998751 85998777 -9273874 + (TTTTC)n Simple_repeat Simple_repeat 1 26 0 8 1241 264 231 0 44 chr17 85999632 85999677 -9272974 - MLT1A LTR MaLR 0 374 330 8 1241 861 260 24 5 chr17 85999677 85999886 -9272765 + ID_B1 SINE B4 2 214 -10 8 1241 521 42 0 14 chr17 85999886 85999959 -9272692 + (GAAA)n Simple_repeat Simple_repeat 2 73 0 8 1241 264 231 0 44 chr17 85999959 85999980 -9272671 - MLT1A LTR MaLR -45 329 311 8 1241 270 292 101 0 chr17 86000002 86000091 -9272560 - MLT1A0 LTR MaLR -58 307 210 1 1241 1084 99 6 30 chr17 86000146 86000313 -9272338 + B2_Mm2 SINE B2 2 164 -31 2 1241 255 103 0 0 chr17 86000315 86000354 -9272297 + (ATG)n Simple_repeat Simple_repeat 1 39 0 3 1241 291 114 0 0 chr17 86000970 86001014 -9271637 + (TAA)n Simple_repeat Simple_repeat 2 45 0 4 1241 216 0 0 0 chr17 86002256 86002280 -9270371 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1241 200 293 16 65 chr17 86002729 86002853 -9269798 + GA-rich Low_complexity Low_complexity 6 123 0 6 1241 521 157 0 0 chr17 86003080 86003169 -9269482 - ID_B1 SINE B4 0 224 136 7 1241 217 316 32 95 chr17 86003169 86003206 -9269445 - PB1D9 SINE Alu 0 120 3 8 1241 846 200 0 0 chr17 86003323 86003494 -9269157 + GA-rich Low_complexity Low_complexity 1 171 0 9 1241 1305 45 17 0 chr17 86003494 86003671 -9268980 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 1241 180 0 0 0 chr17 86003688 86003708 -9268943 + (TGG)n Simple_repeat Simple_repeat 1 20 0 1 1241 185 316 13 38 chr17 86004367 86004446 -9268205 + L2b LINE L2 3096 3172 -203 1 1241 186 133 0 0 chr17 86010115 86010145 -9262506 + (TCCC)n Simple_repeat Simple_repeat 4 33 0 1 1241 232 178 0 0 chr17 86010559 86010604 -9262047 + T-rich Low_complexity Low_complexity 1 45 0 1 1241 279 0 0 0 chr17 86013081 86013112 -9259539 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1241 591 15 0 0 chr17 86013257 86013325 -9259326 + (GA)n Simple_repeat Simple_repeat 1 68 0 1 1241 318 26 0 0 chr17 86016382 86016421 -9256230 + (TTG)n Simple_repeat Simple_repeat 2 40 0 1 1241 424 0 36 0 chr17 86016976 86017032 -9255619 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 1241 242 222 0 45 chr17 86017984 86018050 -9254601 + C-rich Low_complexity Low_complexity 4 66 0 1 1241 474 18 0 0 chr17 86019861 86019916 -9252735 + (GA)n Simple_repeat Simple_repeat 1 55 0 2 1241 629 93 9 0 chr17 86020214 86020321 -9252330 + (TC)n Simple_repeat Simple_repeat 2 109 0 2 1241 209 211 19 0 chr17 86020358 86020410 -9252241 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1241 399 252 0 0 chr17 86020422 86020549 -9252102 + CT-rich Low_complexity Low_complexity 3 129 0 2 1241 327 216 0 0 chr17 86020673 86020789 -9251862 + (CGG)n Simple_repeat Simple_repeat 3 118 0 2 1241 214 302 11 44 chr17 86022436 86022526 -9250125 + CT-rich Low_complexity Low_complexity 1 87 0 2 1241 222 229 0 0 chr17 86023272 86023342 -9249309 + CT-rich Low_complexity Low_complexity 2 71 0 2 1241 24 53 0 0 chr17 86023422 86023460 -9249191 + AT_rich Low_complexity Low_complexity 1 38 0 2 1241 230 0 33 0 chr17 86023712 86023742 -9248909 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 2 1241 504 0 0 0 chr17 86023913 86023969 -9248682 + (TC)n Simple_repeat Simple_repeat 2 57 0 2 1241 22 35 0 0 chr17 86024127 86024156 -9248495 + AT_rich Low_complexity Low_complexity 1 29 0 3 1241 216 299 30 0 chr17 86024228 86024295 -9248356 + CT-rich Low_complexity Low_complexity 4 72 0 3 1241 183 80 0 0 chr17 86024350 86024375 -9248276 + (GA)n Simple_repeat Simple_repeat 2 26 0 3 1241 396 111 0 0 chr17 86026366 86026429 -9246222 + (TG)n Simple_repeat Simple_repeat 1 63 0 3 1241 324 0 0 0 chr17 86026764 86026800 -9245851 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1241 212 100 25 0 chr17 86028483 86028523 -9244128 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 1241 417 39 0 0 chr17 86028591 86028642 -9244009 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 1241 324 0 0 0 chr17 86029419 86029455 -9243196 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 3 1241 248 229 200 0 chr17 86029466 86029536 -9243115 + B1F2 SINE Alu 14 97 -52 3 1241 438 65 0 0 chr17 86029546 86029608 -9243043 + (CA)n Simple_repeat Simple_repeat 2 63 0 3 1241 180 0 0 0 chr17 86029608 86029628 -9243023 + (CCA)n Simple_repeat Simple_repeat 1 20 0 4 1241 252 130 0 0 chr17 86032746 86032792 -9239859 + (GA)n Simple_repeat Simple_repeat 1 46 0 4 1241 189 0 0 0 chr17 86033080 86033101 -9239550 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1241 573 15 0 0 chr17 86033265 86033331 -9239320 + (CA)n Simple_repeat Simple_repeat 2 67 0 4 1241 6316 73 36 3 chr17 86033637 86035231 -9237420 + L1VL4 LINE L1 212 1842 -1717 4 1241 4041 140 1 41 chr17 86035230 86035346 -9237305 + Lx LINE L1 5189 5302 -581 4 1241 1625 27 0 21 chr17 86035346 86035535 -9237116 + B2_Mm1a SINE B2 2 186 -7 4 1241 7053 129 3 31 chr17 86035535 86036071 -9236580 + Lx LINE L1 5303 5829 -825 4 1241 1189 74 0 7 chr17 86036071 86036210 -9236441 + B1_Mus1 SINE Alu 1 139 -9 4 1241 242 0 61 0 chr17 86036210 86036243 -9236408 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1241 7053 116 6 18 chr17 86036252 86037078 -9235573 + Lx LINE L1 5830 6643 -11 4 1241 212 0 0 35 chr17 86037078 86037107 -9235544 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1241 254 342 66 8 chr17 86037347 86037468 -9235183 - MIR3 SINE MIR -11 197 70 5 1241 237 263 0 84 chr17 86037548 86037584 -9235067 + polypyrimidine Low_complexity Low_complexity 43 77 0 5 1241 1281 83 0 0 chr17 86037584 86038078 -9234573 + (TCC)n Simple_repeat Simple_repeat 1 494 0 5 1241 237 263 0 84 chr17 86038078 86038119 -9234532 + polypyrimidine Low_complexity Low_complexity 2 42 0 5 1241 625 259 117 52 chr17 86038159 86038408 -9234243 + MER46C DNA MER2_type 1 265 -73 5 1241 264 231 62 0 chr17 86038425 86038490 -9234161 - ID4 SINE ID -13 70 2 5 1241 731 177 42 21 chr17 86038935 86039079 -9233572 - B1_Mur1 SINE Alu 0 149 3 5 1241 407 305 159 30 chr17 86039761 86040062 -9232589 - L1MC3 LINE L1 -1703 6082 5743 5 1241 180 316 26 26 chr17 86040222 86040300 -9232351 - L2 LINE L2 -473 2946 2869 5 1241 811 262 19 0 chr17 86040452 86040658 -9231993 - B3 SINE B2 0 216 7 5 1241 275 72 0 23 chr17 86040689 86040732 -9231919 + (CAT)n Simple_repeat Simple_repeat 2 43 0 6 1241 930 65 12 31 chr17 86041465 86041625 -9231026 + (GGGAGA)n Simple_repeat Simple_repeat 1 157 0 6 1241 526 121 0 0 chr17 86043171 86043254 -9229397 + B3 SINE B2 1 83 -133 6 1241 519 278 260 0 chr17 86043861 86044034 -9228617 - ID_B1 SINE B4 -6 218 1 6 1241 576 229 33 0 chr17 86044069 86044191 -9228460 - B1_Mur1 SINE Alu -14 135 10 6 1241 245 208 35 105 chr17 86044117 86044203 -9228448 - MT2B LTR ERVL -361 240 161 6 1241 626 257 66 52 chr17 86044206 86044249 -9228402 - B3 SINE B2 0 216 169 6 1241 201 147 0 0 chr17 86044249 86044283 -9228368 + (CATG)n Simple_repeat Simple_repeat 3 36 0 6 1241 626 257 66 52 chr17 86044283 86044452 -9228199 - B3 SINE B2 -48 168 1 6 1241 344 255 26 62 chr17 86045926 86046039 -9226612 + PB1D10 SINE Alu 7 115 -2 6 1241 219 321 24 24 chr17 86046040 86046123 -9226528 + ID4_ SINE ID 1 83 0 6 1241 477 315 0 0 chr17 86046622 86046800 -9225851 + (CTGGGG)n Simple_repeat Simple_repeat 3 180 0 7 1241 268 335 31 43 chr17 86047138 86047305 -9225346 - MIRb SINE MIR -94 174 7 7 1241 1396 75 11 11 chr17 86047782 86047970 -9224681 - B2_Mm2 SINE B2 -7 188 1 7 1241 3084 65 23 5 chr17 86048198 86048587 -9224064 - MTA_Mm LTR MaLR 0 396 1 7 1241 435 225 101 85 chr17 86048660 86048849 -9223802 + B3A SINE B2 7 198 0 7 1241 1460 84 16 0 chr17 86048855 86049046 -9223605 + B2_Mm2 SINE B2 1 194 -1 7 1241 483 273 32 4 chr17 86049120 86049281 -9223370 + B3 SINE B2 25 198 0 7 1241 441 0 0 0 chr17 86049332 86049381 -9223270 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1241 229 292 14 6 chr17 86049444 86049525 -9223126 - L2b LINE L2 -365 3054 2973 7 1241 196 309 104 33 chr17 86049731 86049942 -9222709 - L2b LINE L2 -1101 2318 2093 7 1241 601 304 62 97 chr17 86049947 86050318 -9222333 - ORR1E LTR MaLR -1 358 1 7 1241 934 272 143 6 chr17 86050413 86050727 -9221924 + ORR1E LTR MaLR 1 357 -2 8 1241 1107 176 17 75 chr17 86051938 86052177 -9220474 - URR1B DNA MER1_type 0 225 1 8 1241 288 53 0 0 chr17 86052791 86052829 -9219822 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 1241 376 320 0 0 chr17 86053131 86053228 -9219423 + MTE2b LTR MaLR 3 99 -280 8 1241 543 307 14 14 chr17 86053206 86053348 -9219303 + MTE2b LTR MaLR 39 180 -199 8 1241 751 184 7 41 chr17 86053372 86053519 -9219132 + B1_Mus1 SINE Alu 6 147 -1 8 1241 449 161 11 0 chr17 86053534 86053621 -9219030 + GA-rich Low_complexity Low_complexity 1 88 0 8 1241 288 70 0 0 chr17 86053618 86053661 -9218990 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 8 1241 564 286 78 5 chr17 86053661 86053854 -9218797 + MTE2b LTR MaLR 162 368 -11 8 1241 2470 136 74 2 chr17 86053999 86054420 -9218231 + RLTR19 LTR ERVK 47 497 -2 8 1241 453 299 36 42 chr17 86054500 86054692 -9217959 - L1MB3 LINE L1 -1 6182 5992 8 1241 287 319 74 74 chr17 86054888 86055101 -9217550 - L1MB3 LINE L1 -185 5998 5785 8 1241 3028 63 0 3 chr17 86055101 86055485 -9217166 - L1Md_F2 LINE L1 0 6582 6200 8 1241 287 319 74 74 chr17 86055485 86055528 -9217123 - L1MB3 LINE L1 -399 5784 5742 8 1241 233 340 21 0 chr17 86055529 86055623 -9217028 - MLT1A1 LTR MaLR 0 408 313 9 1241 729 199 191 11 chr17 86055634 86055817 -9216834 + B3 SINE B2 1 216 0 9 1241 417 88 48 10 chr17 86055818 86055921 -9216730 + (TA)n Simple_repeat Simple_repeat 2 108 0 9 1241 207 0 0 0 chr17 86055921 86055943 -9216708 + (TG)n Simple_repeat Simple_repeat 2 24 0 9 1241 450 0 0 0 chr17 86056216 86056266 -9216385 + (CA)n Simple_repeat Simple_repeat 1 50 0 9 1241 189 253 184 0 chr17 86056846 86056933 -9215718 - L3 LINE CR1 -103 4386 4284 9 1241 788 134 0 84 chr17 86057223 86057378 -9215273 - B1_Mur4 SINE Alu 0 150 9 9 1241 321 198 0 0 chr17 86057482 86057563 -9215088 + (TG)n Simple_repeat Simple_repeat 1 81 0 9 1241 468 0 0 0 chr17 86057870 86057922 -9214729 + (TC)n Simple_repeat Simple_repeat 2 53 0 9 1241 279 0 0 0 chr17 86057922 86057952 -9214699 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 1241 2690 168 55 20 chr17 86058012 86058521 -9214130 + RLTR11A2 LTR ERVK 1 527 0 1 1241 270 283 90 10 chr17 86059043 86059143 -9213508 + MIR SINE MIR 155 262 0 1 1241 243 125 0 0 chr17 86059320 86059360 -9213291 + (TTTG)n Simple_repeat Simple_repeat 3 42 0 1 1241 765 185 66 7 chr17 86059392 86059528 -9213123 - B1_Mur4 SINE Alu -5 145 2 1 1241 869 286 114 39 chr17 86059962 86060005 -9212646 + MTE2b LTR MaLR 1 47 -332 1 1241 462 36 0 0 chr17 86060005 86060061 -9212590 + (TAGA)n Simple_repeat Simple_repeat 4 59 0 1 1241 869 286 114 39 chr17 86060061 86060351 -9212300 + MTE2b LTR MaLR 48 358 -21 1 1241 180 0 0 0 chr17 86061231 86061251 -9211400 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 1241 360 0 0 0 chr17 86061251 86061290 -9211361 + (TC)n Simple_repeat Simple_repeat 2 41 0 1 1241 318 67 0 0 chr17 86061294 86061339 -9211312 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1241 295 246 0 104 chr17 86061752 86061774 -9210877 - B4A SINE B4 0 292 274 1 1241 300 70 0 0 chr17 86061774 86061817 -9210834 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1241 295 246 0 104 chr17 86061817 86061871 -9210780 - B4A SINE B4 -19 273 224 1 1241 679 219 13 40 chr17 86061872 86062024 -9210627 - B1_Mur1 SINE Alu -1 148 1 1 1241 509 246 156 26 chr17 86062074 86062266 -9210385 - B4A SINE B4 -62 230 14 1 1241 991 280 97 9 chr17 86062362 86062704 -9209947 - Charlie4a DNA MER1_type -68 440 69 1 1241 4754 89 1 10 chr17 86062706 86063399 -9209252 + L1VL2 LINE L1 167 853 -5482 1 1241 189 0 0 0 chr17 86064263 86064284 -9208367 + (CCCCCA)n Simple_repeat Simple_repeat 1 21 0 1 1241 207 0 0 0 chr17 86064304 86064327 -9208324 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 1 1241 772 164 0 28 chr17 86065184 86065366 -9207285 + CT-rich Low_complexity Low_complexity 2 178 0 1 1241 348 174 43 179 chr17 86065521 86065638 -9207013 + ID2 SINE ID 6 105 -47 1 1241 207 0 0 0 chr17 86065638 86065661 -9206990 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 1241 303 174 43 179 chr17 86065661 86065683 -9206968 + BC1_Mm scRNA scRNA 106 126 -26 1 1241 358 236 175 24 chr17 86065718 86065844 -9206807 - B1F SINE Alu -1 148 4 1 1241 936 346 105 16 chr17 86065888 86066385 -9206266 - MLT1H1 LTR MaLR -3 552 12 1 1241 297 233 0 32 chr17 86066760 86066822 -9205829 + B1_Mur4 SINE Alu 1 60 -90 1 1241 205 368 0 0 chr17 86066832 86066938 -9205713 + G-rich Low_complexity Low_complexity 2 107 0 1 1241 697 86 27 54 chr17 86066940 86067051 -9205600 + B1_Mur4 SINE Alu 43 150 0 1 1241 585 0 0 0 chr17 86067055 86067120 -9205531 + (GAA)n Simple_repeat Simple_repeat 2 66 0 1 1241 234 0 0 0 chr17 86067120 86067146 -9205505 + (CAA)n Simple_repeat Simple_repeat 1 26 0 1 1241 432 0 0 0 chr17 86067146 86067194 -9205457 + (CCA)n Simple_repeat Simple_repeat 2 49 0 1 1241 526 274 78 28 chr17 86067551 86067731 -9204920 - B2_Mm2 SINE B2 -6 189 1 1 1241 499 237 24 71 chr17 86067969 86068096 -9204555 + B1F1 SINE Alu 10 130 -19 1 1241 304 259 0 115 chr17 86068055 86068151 -9204500 + ID_B1 SINE B4 139 223 -1 1 1241 439 308 29 70 chr17 86068198 86068369 -9204282 + B4A SINE B4 2 165 -127 1 1241 338 160 0 0 chr17 86068639 86068689 -9203962 + polypyrimidine Low_complexity Low_complexity 4 53 0 1 1241 811 134 41 6 chr17 86068690 86068862 -9203789 + C-rich Low_complexity Low_complexity 2 179 0 1 1241 429 54 0 0 chr17 86069138 86069194 -9203457 + (TC)n Simple_repeat Simple_repeat 2 57 0 1 1241 667 158 29 36 chr17 86069852 86069990 -9202661 - B1_Mus2 SINE Alu -1 146 10 1 1241 253 303 49 142 chr17 86069853 86070099 -9202552 - B4 SINE B4 -69 223 1 1 1241 355 232 134 67 chr17 86070631 86070765 -9201886 - ORR1E LTR MaLR 0 379 237 1 1241 417 292 0 10 chr17 86070820 86070917 -9201734 - ORR1E LTR MaLR -263 96 1 1 1241 284 292 156 76 chr17 86070992 86071229 -9201422 - MLT1L LTR MaLR -59 551 296 1 1241 487 273 127 25 chr17 86072403 86072492 -9200159 - L1M4 LINE L1 -5176 1366 1279 1 1241 1630 159 0 190 chr17 86072492 86072727 -9199924 - RMER17C LTR ERVK 0 410 231 1 1241 642 26 0 0 chr17 86072727 86072803 -9199848 + (GA)n Simple_repeat Simple_repeat 1 76 0 1 1241 1630 159 0 190 chr17 86072803 86073073 -9199578 - RMER17C LTR ERVK -180 230 1 1 1241 487 273 127 25 chr17 86073073 86073227 -9199424 - L1M4 LINE L1 -5264 1278 1098 1 1241 2897 134 7 5 chr17 86073229 86073649 -9199002 - MTC LTR MaLR 0 421 1 1 1241 552 244 150 22 chr17 86073653 86073926 -9198725 - L1M4 LINE L1 -5446 1096 789 1 1241 540 321 128 53 chr17 86073943 86074238 -9198413 - L1M4 LINE L1 -5800 742 421 1 1241 342 67 0 0 chr17 86074238 86074283 -9198368 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1241 540 321 128 53 chr17 86074283 86074649 -9198002 - L1M4 LINE L1 -6122 420 31 1 1241 274 239 27 40 chr17 86074734 86074808 -9197843 - RSINE1 SINE B4 -74 91 19 1 1241 737 135 22 84 chr17 86074951 86075129 -9197522 + RMER17C LTR ERVK 1 167 -243 1 1241 390 42 0 0 chr17 86075136 86075184 -9197467 + (TC)n Simple_repeat Simple_repeat 1 48 0 1 1241 229 140 35 0 chr17 86075332 86075389 -9197262 + C-rich Low_complexity Low_complexity 2 60 0 1 1241 271 381 19 0 chr17 86075934 86076039 -9196612 - Tigger5 DNA MER2_type -9 2397 2291 1 1241 266 353 87 19 chr17 86076085 86076189 -9196462 - Tigger5 DNA MER2_type -2250 156 46 1 1241 2179 124 69 3 chr17 86076418 86076750 -9195901 + ORR1B1 LTR MaLR 33 386 -8 1 1241 1128 60 0 0 chr17 86076755 86076888 -9195763 + B1_Mm SINE Alu 2 134 -13 1 1241 288 0 0 0 chr17 86076888 86076920 -9195731 + (CAAAA)n Simple_repeat Simple_repeat 1 32 0 1 1241 1303 143 28 0 chr17 86076999 86077216 -9195435 - URR1B DNA MER1_type -1 224 2 1 1241 426 179 0 0 chr17 86077508 86077603 -9195048 + (CA)n Simple_repeat Simple_repeat 1 95 0 1 1241 501 159 153 38 chr17 86077711 86077842 -9194809 - B1_Mur4 SINE Alu -1 149 4 1 1241 2434 152 34 7 chr17 86078278 86078688 -9193963 + MTC LTR MaLR 1 421 0 1 1241 186 191 0 0 chr17 86083309 86083356 -9189295 + G-rich Low_complexity Low_complexity 1 47 0 1 1241 21 0 0 0 chr17 86083627 86083648 -9189003 + AT_rich Low_complexity Low_complexity 1 21 0 1 1241 654 13 0 0 chr17 86083784 86083859 -9188792 + (GA)n Simple_repeat Simple_repeat 2 76 0 1 1241 504 0 0 0 chr17 86084081 86084137 -9188514 + (GA)n Simple_repeat Simple_repeat 1 56 0 1 1241 256 276 0 39 chr17 86084144 86084246 -9188405 + GA-rich Low_complexity Low_complexity 3 100 0 1 1241 37 97 0 0 chr17 86087302 86087416 -9185235 + GC_rich Low_complexity Low_complexity 1 114 0 1 1241 240 213 40 13 chr17 86087444 86087520 -9185131 + C-rich Low_complexity Low_complexity 4 81 0 1 1241 190 116 47 0 chr17 86087554 86087597 -9185054 + (CTCG)n Simple_repeat Simple_repeat 2 46 0 1 1241 23 54 0 0 chr17 86087772 86087809 -9184842 + GC_rich Low_complexity Low_complexity 1 37 0 1 1241 689 0 12 0 chr17 86090115 86090196 -9182455 + (CAGAG)n Simple_repeat Simple_repeat 4 85 0 1 1241 180 0 0 0 chr17 86092425 86092445 -9180206 + (CG)n Simple_repeat Simple_repeat 2 21 0 1 1241 369 0 0 0 chr17 86092445 86092485 -9180166 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1241 216 0 0 0 chr17 86092522 86092546 -9180105 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 1241 405 0 0 0 chr17 86092892 86092937 -9179714 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1241 660 203 81 7 chr17 86094024 86094173 -9178478 - B3 SINE B2 -56 160 1 1 1241 1248 287 65 43 chr17 86094175 86094638 -9178013 + MER44B DNA MER2_type 78 550 0 1 1241 348 331 56 2 chr17 86094834 86095028 -9177623 + MIRb SINE MIR 19 222 -46 1 1241 358 242 95 0 chr17 86095447 86095542 -9177109 - MIR SINE MIR -84 178 75 1 1241 198 0 0 0 chr17 86095953 86095975 -9176676 + (TCTCCC)n Simple_repeat Simple_repeat 3 24 0 1 1241 286 175 18 0 chr17 86096372 86096429 -9176222 + GA-rich Low_complexity Low_complexity 1 58 0 1 1241 428 61 72 12 chr17 86096435 86096518 -9176133 + (AGGGGG)n Simple_repeat Simple_repeat 6 93 0 1 1241 1460 6 6 0 chr17 86096519 86096688 -9175963 + (GGGAGA)n Simple_repeat Simple_repeat 6 175 0 1 1241 242 245 163 41 chr17 86097243 86097341 -9175310 + MLT1I LTR MaLR 73 182 -307 1 1241 774 152 0 0 chr17 86097348 86097568 -9175083 + (GGCTG)n Simple_repeat Simple_repeat 1 220 0 1 1241 247 178 30 61 chr17 86097668 86097734 -9174917 + MLT1A1 LTR MaLR 345 408 0 1 1241 1019 253 13 18 chr17 86098437 86098662 -9173989 - ID_B1 SINE B4 0 224 1 1 1241 193 331 132 62 chr17 86099504 86099633 -9173018 + L2a LINE L2 3289 3426 0 1 1241 817 186 118 10 chr17 86101052 86101085 -9171566 - B3 SINE B2 0 216 183 1 1241 432 51 0 0 chr17 86101085 86101144 -9171507 + (TATG)n Simple_repeat Simple_repeat 4 62 0 1 1241 817 186 118 10 chr17 86101144 86101305 -9171346 - B3 SINE B2 -34 182 2 1 1241 901 305 10 10 chr17 86101342 86101541 -9171110 + ID_B1 SINE B4 3 201 -23 1 1241 336 249 3 8 chr17 86101541 86101634 -9171017 + B1F SINE Alu 63 135 -14 1 1241 1043 114 0 13 chr17 86101724 86101875 -9170776 - B1_Mur4 SINE Alu 0 150 2 1 1241 25 31 0 0 chr17 86101875 86101907 -9170744 + AT_rich Low_complexity Low_complexity 1 32 0 1 1241 1133 45 0 0 chr17 86102740 86102873 -9169778 + B1_Mus1 SINE Alu 2 134 -14 1 1241 549 0 0 0 chr17 86102873 86102934 -9169717 + (CAAAA)n Simple_repeat Simple_repeat 5 65 0 1 1241 711 289 160 24 chr17 86102945 86103232 -9169419 + MTD LTR MaLR 9 334 -85 1 1241 369 122 0 0 chr17 86104722 86104796 -9167855 + (TCTCTG)n Simple_repeat Simple_repeat 3 76 0 1 1241 301 331 97 26 chr17 86104939 86105094 -9167557 - HAL1-3A_ME LINE L1 -409 2449 2284 1 1241 824 186 4 14 chr17 86105110 86105389 -9167262 + CT-rich Low_complexity Low_complexity 1 275 0 1 1241 459 260 23 61 chr17 86105411 86105542 -9167109 - B1F1 SINE Alu -21 128 3 1 1241 336 316 68 93 chr17 86105633 86105912 -9166739 - ORR1E LTR MaLR -1 358 87 1 1241 646 265 46 51 chr17 86106243 86106438 -9166213 + B3A SINE B2 5 198 0 1 1241 698 124 153 24 chr17 86106442 86106566 -9166085 + B1_Mur4 SINE Alu 2 141 -9 1 1241 432 82 0 0 chr17 86106566 86106627 -9166024 + (CAAAC)n Simple_repeat Simple_repeat 2 62 0 1 1241 251 339 68 104 chr17 86106682 86106750 -9165901 + MLT1G LTR MaLR 34 107 -472 1 1241 528 59 0 0 chr17 86106750 86106818 -9165833 + (TCCC)n Simple_repeat Simple_repeat 2 69 0 1 1241 389 298 132 75 chr17 86106818 86107149 -9165502 + MLT1G LTR MaLR 108 390 -201 1 1241 233 284 114 29 chr17 86107161 86107266 -9165385 + MLT1G LTR MaLR 373 486 -3 1 1241 327 354 0 0 chr17 86107946 86108042 -9164609 - B1F SINE Alu -53 96 1 2 1241 272 257 114 0 chr17 86108086 86108156 -9164495 - ID SINE ID -144 80 3 2 1241 528 344 25 94 chr17 86108239 86108525 -9164126 - B4A SINE B4 0 292 27 2 1241 248 344 32 25 chr17 86108819 86108977 -9163674 + MER53 DNA hAT 14 172 -21 2 1241 1480 179 172 0 chr17 86109491 86109804 -9162847 + ORR1B2 LTR MaLR 1 367 0 2 1241 862 304 0 0 chr17 86110248 86110468 -9162183 - ID_B1 SINE B4 -1 223 4 2 1241 23 0 0 0 chr17 86110478 86110501 -9162150 + AT_rich Low_complexity Low_complexity 1 23 0 2 1241 244 344 0 59 chr17 86110989 86111159 -9161492 + (CCCCAG)n Simple_repeat Simple_repeat 6 165 0 2 1241 21 0 0 0 chr17 86111491 86111512 -9161139 + AT_rich Low_complexity Low_complexity 1 21 0 2 1241 234 333 31 51 chr17 86111512 86111610 -9161041 - PB1D7 SINE Alu -13 107 12 2 1241 231 359 0 0 chr17 86111817 86111959 -9160692 + CT-rich Low_complexity Low_complexity 3 144 0 2 1241 387 265 115 8 chr17 86112210 86112404 -9160247 + MLT1G LTR MaLR 139 366 -229 2 1241 208 255 103 0 chr17 86112455 86112547 -9160104 + MIRc SINE MIR 156 268 0 2 1241 292 278 97 36 chr17 86113519 86113646 -9159005 + MIRb SINE MIR 35 181 -87 2 1241 21 36 0 0 chr17 86113693 86113721 -9158930 + AT_rich Low_complexity Low_complexity 1 28 0 2 1242 207 0 0 0 chr17 86114479 86114502 -9158149 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 2 1242 871 313 43 14 chr17 86114733 86115015 -9157636 + MTE2b LTR MaLR 82 371 -8 2 1242 1253 170 4 22 chr17 86115610 86115839 -9156812 + URR1B DNA MER1_type 1 225 0 2 1242 3390 220 125 24 chr17 86117531 86118593 -9154058 - RMER1A Other Other -5 1025 43 2 1242 387 0 0 0 chr17 86118731 86118774 -9153877 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2 1242 654 228 24 0 chr17 86118774 86118897 -9153754 - B1_Mur1 SINE Alu -11 138 13 2 1242 392 271 91 65 chr17 86118897 86118921 -9153730 - B4A SINE B4 -76 216 65 2 1242 26 30 0 0 chr17 86119021 86119054 -9153597 + AT_rich Low_complexity Low_complexity 1 33 0 2 1242 278 301 218 0 chr17 86119065 86119198 -9153453 - RSINE1 SINE B4 0 165 4 2 1242 455 330 93 73 chr17 86119227 86119570 -9153081 + L1M5 LINE L1 5304 5653 -587 2 1242 455 284 35 0 chr17 86119758 86119899 -9152752 + B3A SINE B2 2 147 -51 2 1242 2363 129 88 5 chr17 86120611 86120984 -9151667 + MTC LTR MaLR 18 421 0 2 1242 3915 57 2 2 chr17 86121269 86121744 -9150907 - MT2C_Mm LTR ERVL 0 475 1 2 1242 513 211 0 32 chr17 86123000 86123186 -9149465 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1242 731 184 0 11 chr17 86123213 86123394 -9149257 + (TG)n Simple_repeat Simple_repeat 1 179 0 2 1242 298 321 112 81 chr17 86123414 86123672 -9148979 - B4 SINE B4 0 292 27 2 1242 2488 189 98 0 chr17 86123700 86124135 -9148516 + MT2A LTR ERVL 6 483 -50 2 1242 635 0 0 13 chr17 86124135 86124211 -9148440 + (CA)n Simple_repeat Simple_repeat 2 76 0 2 1242 2488 189 98 0 chr17 86124211 86124256 -9148395 + MT2A LTR ERVL 484 532 -1 2 1242 474 234 193 46 chr17 86124256 86124511 -9148140 - ORR1D2 LTR MaLR -49 321 5 2 1242 255 150 0 0 chr17 86124776 86124836 -9147815 + (T)n Simple_repeat Simple_repeat 1 60 0 2 1242 675 269 19 0 chr17 86126419 86126579 -9146072 - RSINE1 SINE B4 -1 164 2 2 1242 504 0 0 0 chr17 86126696 86126752 -9145899 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 2 1242 195 42 0 0 chr17 86126752 86126776 -9145875 + (CCCG)n Simple_repeat Simple_repeat 2 25 0 2 1242 183 80 0 0 chr17 86126776 86126801 -9145850 + (TCCA)n Simple_repeat Simple_repeat 1 25 0 2 1242 1092 101 0 17 chr17 86126801 86126982 -9145669 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 2 1242 711 104 0 0 chr17 86126984 86127090 -9145561 + (TCCA)n Simple_repeat Simple_repeat 4 109 0 2 1242 963 201 49 5 chr17 86127091 86127296 -9145355 - B3 SINE B2 0 216 3 2 1242 2072 222 31 16 chr17 86127372 86127858 -9144793 + RLTR16 LTR ERVK 1 493 -12 2 1242 447 52 0 0 chr17 86128398 86128456 -9144195 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 1242 1500 54 16 0 chr17 86128471 86128657 -9143994 - B2_Mm2 SINE B2 -5 190 2 2 1242 483 322 93 17 chr17 86128985 86129222 -9143429 + ORSL-2b DNA Tip100 52 306 -202 2 1242 2258 194 100 0 chr17 86129335 86129784 -9142867 - RMER1C Other Other -9 1333 840 2 1242 21 0 0 0 chr17 86129929 86129950 -9142701 + AT_rich Low_complexity Low_complexity 1 21 0 2 1242 278 291 18 64 chr17 86130419 86130529 -9142122 + MIR3 SINE MIR 103 207 -1 2 1242 198 0 0 0 chr17 86130816 86130838 -9141813 + (TGG)n Simple_repeat Simple_repeat 2 23 0 2 1242 453 324 65 76 chr17 86132099 86132376 -9140275 - B4 SINE B4 -14 278 5 2 1242 463 196 130 9 chr17 86132706 86132765 -9139886 + RMER3D-int LTR ERVK 1 59 -2783 2 1242 504 0 0 0 chr17 86132765 86132821 -9139830 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 2 1242 463 196 130 9 chr17 86132821 86132869 -9139782 + RMER3D-int LTR ERVK 60 120 -2722 2 1242 350 202 37 37 chr17 86132918 86133000 -9139651 + RLTR17 LTR ERVK 611 692 0 2 1242 218 342 62 25 chr17 86133281 86133362 -9139289 + B1F SINE Alu 1 84 -65 2 1242 186 292 0 0 chr17 86134007 86134055 -9138596 - MIRc SINE MIR -133 135 88 2 1242 199 339 45 68 chr17 86135369 86135546 -9137105 + L2 LINE L2 2790 2962 -457 2 1242 244 324 63 0 chr17 86135783 86135894 -9136757 + MIR3 SINE MIR 37 154 -54 2 1242 289 373 0 0 chr17 86135894 86136004 -9136647 + PB1D10 SINE Alu 1 110 -7 2 1242 767 155 6 0 chr17 86136004 86136178 -9136473 + (CCAA)n Simple_repeat Simple_repeat 4 178 0 2 1242 306 115 0 0 chr17 86136195 86136247 -9136404 + (CCAA)n Simple_repeat Simple_repeat 4 55 0 2 1242 27 0 0 0 chr17 86136258 86136285 -9136366 + AT_rich Low_complexity Low_complexity 1 27 0 2 1242 181 256 0 25 chr17 86136343 86136383 -9136268 - L2a LINE L2 -92 3334 3296 2 1242 25 0 0 0 chr17 86136598 86136623 -9136028 + GC_rich Low_complexity Low_complexity 1 25 0 2 1242 21 82 0 0 chr17 86137171 86137220 -9135431 + AT_rich Low_complexity Low_complexity 1 49 0 2 1242 566 269 86 25 chr17 86137220 86137418 -9135233 - B3 SINE B2 0 216 7 2 1242 1412 44 0 6 chr17 86138335 86138516 -9134135 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 2 1242 1008 90 18 23 chr17 86138536 86138707 -9133944 + (TTCCC)n Simple_repeat Simple_repeat 4 173 0 2 1242 834 205 21 7 chr17 86138746 86138918 -9133733 + B3 SINE B2 1 182 -11 2 1242 1913 172 16 55 chr17 86139186 86139568 -9133083 + ORR1B2 LTR MaLR 1 367 0 2 1242 22 35 0 0 chr17 86139636 86139665 -9132986 + AT_rich Low_complexity Low_complexity 1 29 0 2 1242 475 310 218 30 chr17 86139918 86140184 -9132467 + MLT1A1 LTR MaLR 79 394 -14 2 1242 628 225 73 95 chr17 86140804 86141161 -9131490 + RLTR20D LTR ERVK 5 578 0 2 1242 447 348 91 10 chr17 86141882 86142178 -9130473 + MLT1C LTR MaLR 4 323 -144 2 1242 308 356 111 0 chr17 86142159 86142294 -9130357 + MLT1C LTR MaLR 241 390 0 2 1242 2491 166 78 30 chr17 86142646 86143149 -9129502 - RLTR11A2 LTR ERVK 0 527 1 2 1242 1047 256 89 42 chr17 86143221 86143580 -9129071 + MTEa LTR MaLR 3 378 -1 2 1242 205 311 81 0 chr17 86143700 86143774 -9128877 + MIR3 SINE MIR 88 167 -41 2 1242 630 130 0 0 chr17 86143793 86143924 -9128727 + (GA)n Simple_repeat Simple_repeat 1 131 0 2 1242 283 324 162 61 chr17 86143926 86144074 -9128577 - MLT1J LTR MaLR -306 206 44 2 1242 390 361 43 34 chr17 86144352 86144561 -9128090 - LTR16A LTR ERVL -13 438 228 2 1242 1197 265 120 51 chr17 86144912 86144995 -9127656 + RCHARR1 DNA MER1_type 43 151 -823 2 1242 1797 133 41 82 chr17 86144995 86145338 -9127313 + ORR1A4 LTR MaLR 1 329 0 2 1242 1197 265 120 51 chr17 86145338 86145663 -9126988 + RCHARR1 DNA MER1_type 152 479 -495 2 1242 609 268 177 20 chr17 86145728 86146040 -9126611 - MTEb LTR MaLR -11 368 2 2 1242 1383 209 105 8 chr17 86146042 86146394 -9126257 + RCHARR1 DNA MER1_type 584 969 -5 2 1242 225 0 0 0 chr17 86147915 86147940 -9124711 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1242 1305 127 78 0 chr17 86149620 86149825 -9122826 - URR1B DNA MER1_type -4 221 1 2 1242 207 186 0 0 chr17 86150846 86150889 -9121762 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1242 192 232 304 29 chr17 86150899 86151001 -9121650 + MIR SINE MIR 21 150 -112 2 1242 503 286 127 22 chr17 86151153 86151297 -9121354 + MLT1A0 LTR MaLR 10 162 -203 2 1242 279 0 0 0 chr17 86151297 86151328 -9121323 + (TC)n Simple_repeat Simple_repeat 2 32 0 2 1242 503 286 127 22 chr17 86151328 86151412 -9121239 + MLT1A0 LTR MaLR 163 261 -104 2 1242 369 241 18 12 chr17 86151725 86151889 -9120762 + (CATA)n Simple_repeat Simple_repeat 4 168 0 2 1242 276 318 184 0 chr17 86152138 86152339 -9120312 + L1MEc LINE L1 1468 1705 -4837 2 1242 769 262 28 18 chr17 86152358 86152576 -9120075 + ID_B1 SINE B4 5 224 0 2 1242 323 315 26 26 chr17 86152586 86152700 -9119951 + L1MEc LINE L1 1809 1922 -4803 2 1242 699 216 0 0 chr17 86152700 86152940 -9119711 + (CAG)n Simple_repeat Simple_repeat 1 240 0 2 1242 431 281 39 0 chr17 86152964 86153149 -9119502 + HAL1-2a_MD LINE L1 2343 2505 -519 2 1242 337 315 48 58 chr17 86153134 86153323 -9119328 + L1MEc LINE L1 1967 2153 -4587 2 1242 319 258 79 0 chr17 86153366 86153455 -9119196 + B1F SINE Alu 47 142 -7 2 1242 221 325 12 0 chr17 86153471 86153551 -9119100 + ID4_ SINE ID 2 82 -1 2 1242 378 297 102 31 chr17 86153565 86153919 -9118732 + L1MEc LINE L1 2176 2554 -4171 2 1242 549 207 0 18 chr17 86154061 86154174 -9118477 + B3A SINE B2 2 112 -86 2 1242 477 0 0 0 chr17 86154378 86154431 -9118220 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1242 266 246 115 14 chr17 86154466 86154637 -9118014 - L1ME2 LINE L1 -186 5978 5793 2 1242 610 289 72 55 chr17 86154741 86155180 -9117471 - L1ME2 LINE L1 -667 5777 5326 2 1242 3453 25 5 2 chr17 86155180 86155575 -9117076 + MTA_Mm LTR MaLR 1 396 0 2 1242 610 290 77 50 chr17 86155575 86155656 -9116995 - L1ME2 LINE L1 -821 5325 5245 2 1242 303 257 27 13 chr17 86155777 86155852 -9116799 - ID4 SINE ID -4 79 4 2 1242 288 320 0 37 chr17 86155861 86155968 -9116683 - PB1D10 SINE Alu -3 114 12 2 1242 402 284 42 96 chr17 86155991 86156368 -9116283 - L1ME2 LINE L1 -1459 4687 4331 2 1242 198 0 0 0 chr17 86156627 86156649 -9116002 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 1242 336 48 0 0 chr17 86157207 86157249 -9115402 + (GGA)n Simple_repeat Simple_repeat 1 42 0 3 1242 607 189 0 16 chr17 86159328 86159511 -9113140 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1242 315 167 0 0 chr17 86159529 86159595 -9113056 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 1242 1025 211 89 46 chr17 86160071 86160398 -9112253 + L1M4 LINE L1 4046 4386 -1760 3 1242 1248 77 24 0 chr17 86160416 86160586 -9112065 - B2_Mm2 SINE B2 -14 181 8 3 1242 30 0 0 0 chr17 86160600 86160630 -9112021 + AT_rich Low_complexity Low_complexity 1 30 0 3 1242 423 379 68 0 chr17 86160655 86160787 -9111864 + RSINE1 SINE B4 25 165 0 3 1242 189 171 0 0 chr17 86160787 86160822 -9111829 + (TATATG)n Simple_repeat Simple_repeat 4 38 0 3 1242 378 0 0 0 chr17 86160843 86160885 -9111766 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1242 1969 141 122 11 chr17 86160888 86161239 -9111412 + ORR1B1 LTR MaLR 1 390 -4 3 1242 908 286 85 39 chr17 86161261 86161480 -9111171 + L1M4 LINE L1 4405 4632 -1514 3 1242 1416 246 69 17 chr17 86161480 86161840 -9110811 - MTE2b LTR MaLR 0 379 1 3 1242 908 286 85 39 chr17 86161840 86162031 -9110620 + L1M4 LINE L1 4633 4834 -1312 3 1242 236 281 15 45 chr17 86162225 86162292 -9110359 - LTR79 LTR ERVL -256 271 207 3 1242 2513 131 18 0 chr17 86163392 86163775 -9108876 - ORR1B1 LTR MaLR 0 394 5 3 1242 3257 161 141 6 chr17 86163776 86163942 -9108709 - ORR1B1-int LTR MaLR 0 1509 1333 3 1242 477 0 0 0 chr17 86163942 86163995 -9108656 + (TAAA)n Simple_repeat Simple_repeat 4 56 0 3 1242 3257 161 141 6 chr17 86163995 86164480 -9108171 - ORR1B1-int LTR MaLR -177 1332 771 3 1242 268 185 29 71 chr17 86164533 86164603 -9108048 + ID_B1 SINE B4 99 165 -59 3 1242 300 174 0 0 chr17 86164613 86164659 -9107992 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1242 641 242 7 0 chr17 86164659 86164957 -9107694 + (TA)n Simple_repeat Simple_repeat 1 300 0 3 1242 213 65 0 0 chr17 86164957 86164988 -9107663 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 3 1242 279 0 0 0 chr17 86164988 86165019 -9107632 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1242 207 0 0 0 chr17 86165295 86165318 -9107333 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 3 1242 22 0 0 0 chr17 86165398 86165420 -9107231 + AT_rich Low_complexity Low_complexity 1 22 0 3 1242 396 0 0 0 chr17 86166870 86166914 -9105737 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1242 519 269 238 59 chr17 86166966 86167201 -9105450 - B4A SINE B4 -13 279 3 3 1242 296 330 0 87 chr17 86167316 86167419 -9105232 - MER119 DNA MER1_type 0 583 490 3 1242 631 336 53 28 chr17 86167481 86167763 -9104888 + B4A SINE B4 2 290 -2 3 1242 1218 289 105 8 chr17 86167870 86168222 -9104429 - MER119 DNA MER1_type -170 413 28 3 1242 254 348 100 127 chr17 86169141 86169510 -9103141 + ORR1E LTR MaLR 1 359 0 3 1242 245 316 101 0 chr17 86170142 86170221 -9102430 - RSINE1 SINE B4 -1 164 78 3 1242 217 180 98 20 chr17 86170343 86170394 -9102257 - RSINE1 SINE B4 -109 56 2 3 1242 2823 140 72 52 chr17 86171516 86171610 -9101041 + RLTR31_Mm LTR ERVK 1 96 -465 3 1242 693 0 0 0 chr17 86171610 86171687 -9100964 + (CAGAGA)n Simple_repeat Simple_repeat 1 77 0 3 1242 2823 140 72 52 chr17 86171687 86172037 -9100614 + RLTR31_Mm LTR ERVK 97 470 -91 3 1242 459 0 0 0 chr17 86172037 86172088 -9100563 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 1242 2823 140 72 52 chr17 86172088 86172185 -9100466 + RLTR31_Mm LTR ERVK 471 554 -7 3 1242 279 319 132 36 chr17 86172361 86172527 -9100124 + ORR1E LTR MaLR 8 189 -170 3 1242 336 341 29 7 chr17 86172933 86173069 -9099582 - MLT1J LTR MaLR -304 208 70 3 1242 657 315 30 34 chr17 86173149 86173412 -9099239 - MLT2B4 LTR ERVL -280 276 15 3 1242 203 291 55 0 chr17 86173747 86173802 -9098849 + MIR SINE MIR 87 144 -64 3 1242 505 344 236 14 chr17 86174898 86175589 -9097062 + L2 LINE L2 64 907 -2512 3 1242 296 357 47 69 chr17 86175870 86176147 -9096504 + L2 LINE L2 1040 1310 -2109 3 1242 184 366 79 36 chr17 86176257 86176396 -9096255 + L2 LINE L2 1519 1663 -1756 3 1242 180 347 0 48 chr17 86176468 86176592 -9096059 + L2 LINE L2 1588 1705 -1714 3 1242 454 325 70 54 chr17 86176600 86176841 -9095810 + ORR1E LTR MaLR 1 245 -114 3 1242 288 311 253 8 chr17 86176846 86177083 -9095568 + L2 LINE L2 2295 2589 -830 3 1242 23 0 0 0 chr17 86177387 86177410 -9095241 + AT_rich Low_complexity Low_complexity 1 23 0 3 1242 589 246 22 29 chr17 86177412 86177550 -9095101 + RSINE1 SINE B4 3 139 -26 3 1242 289 293 203 0 chr17 86177703 86177826 -9094825 + B3A SINE B2 1 148 -50 3 1242 238 203 0 106 chr17 86179202 86179268 -9093383 + MIR SINE MIR 139 197 -65 3 1242 506 323 103 30 chr17 86179272 86179642 -9093009 + Tigger6b DNA MER2_type 2 398 -1199 3 1242 398 324 54 7 chr17 86179958 86180107 -9092544 + MIRb SINE MIR 103 258 -10 3 1242 1386 84 16 0 chr17 86180490 86180680 -9091971 - B2_Mm1a SINE B2 0 193 1 3 1242 996 72 232 7 chr17 86181598 86181753 -9090898 + B2_Mm2 SINE B2 1 190 -5 3 1242 1598 228 26 29 chr17 86181819 86182199 -9090452 - Lx6 LINE L1 -23 7437 7059 3 1242 333 0 0 0 chr17 86182574 86182611 -9090040 + (T)n Simple_repeat Simple_repeat 1 37 0 3 1242 258 105 0 0 chr17 86182635 86182673 -9089978 + (ATGGTG)n Simple_repeat Simple_repeat 6 43 0 3 1242 889 176 0 0 chr17 86183755 86183897 -9088754 - B1_Mur2 SINE Alu -2 147 6 3 1242 220 281 133 20 chr17 86184145 86184243 -9088408 - L2c LINE L2 -16 3371 3263 3 1242 285 315 58 77 chr17 86186473 86186628 -9086023 - MIR3 SINE MIR -55 153 2 3 1242 331 198 42 17 chr17 86186957 86187075 -9085576 + CT-rich Low_complexity Low_complexity 3 123 0 3 1242 297 0 0 0 chr17 86187372 86187405 -9085246 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 1242 1046 209 9 32 chr17 86189210 86189428 -9083223 + B3 SINE B2 2 214 -2 3 1242 779 167 0 11 chr17 86189519 86189701 -9082950 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 1242 241 388 32 56 chr17 86189811 86190062 -9082589 + MIRb SINE MIR 14 258 -10 3 1242 362 39 19 0 chr17 86190506 86190558 -9082093 + (CAAAAA)n Simple_repeat Simple_repeat 2 54 0 3 1242 615 172 325 0 chr17 86190690 86190853 -9081798 - B3 SINE B2 0 216 1 3 1242 380 179 118 12 chr17 86191828 86191913 -9080738 - PB1 SINE Alu 0 127 34 3 1242 332 167 33 0 chr17 86193040 86193100 -9079551 - B1_Mur4 SINE Alu -2 148 87 3 1242 254 258 0 16 chr17 86193047 86193110 -9079541 - ID_B1 SINE B4 -9 215 154 3 1242 243 0 0 0 chr17 86195851 86195878 -9076773 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1242 21 0 0 0 chr17 86201137 86201158 -9071493 + AT_rich Low_complexity Low_complexity 1 21 0 3 1242 204 188 0 0 chr17 86201757 86201789 -9070862 + C-rich Low_complexity Low_complexity 3 34 0 3 1242 369 0 0 0 chr17 86201790 86201831 -9070820 + (TAAAA)n Simple_repeat Simple_repeat 1 41 0 3 1242 240 100 0 0 chr17 86202835 86202875 -9069776 + (GA)n Simple_repeat Simple_repeat 1 40 0 3 1242 431 193 18 0 chr17 86202949 86203058 -9069593 + Lx9 LINE L1 7532 7642 -2 3 1242 186 354 125 0 chr17 86203063 86203159 -9069492 + L3 LINE CR1 4282 4389 -100 3 1242 378 0 0 0 chr17 86203670 86203712 -9068939 + (TC)n Simple_repeat Simple_repeat 2 43 0 3 1242 504 0 0 0 chr17 86203712 86203767 -9068884 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 1242 371 234 85 0 chr17 86203829 86203923 -9068728 + RSINE1 SINE B4 31 132 -33 3 1242 21 0 0 0 chr17 86203957 86203978 -9068673 + AT_rich Low_complexity Low_complexity 1 21 0 3 1242 732 245 0 0 chr17 86204855 86205002 -9067649 - B1_Mur1 SINE Alu -1 148 2 3 1242 417 280 130 65 chr17 86205713 86206089 -9066562 - Charlie4a DNA MER1_type -1 507 70 3 1242 347 276 33 161 chr17 86206792 86207080 -9065571 + L1ME3 LINE L1 5122 5364 -782 3 1242 229 278 25 25 chr17 86207139 86207257 -9065394 + L1MD LINE L1 5435 5552 -690 3 1242 377 325 15 35 chr17 86207420 86207621 -9065030 + L1ME3 LINE L1 5844 6040 -122 3 1242 334 312 146 12 chr17 86207765 86208057 -9064594 + L1M5 LINE L1 5277 5615 -547 3 1242 660 124 0 0 chr17 86208224 86208329 -9064322 + (GA)n Simple_repeat Simple_repeat 2 106 0 3 1242 402 241 59 71 chr17 86208334 86208416 -9064235 + L1MA8 LINE L1 6066 6157 -134 3 1242 378 0 0 0 chr17 86208416 86208458 -9064193 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1242 402 241 59 71 chr17 86208458 86208545 -9064106 + L1MA8 LINE L1 6158 6233 -58 3 1242 270 0 0 0 chr17 86208548 86208578 -9064073 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1242 3635 195 72 20 chr17 86208671 86209436 -9063215 - Lx6 LINE L1 -4 7456 6652 3 1242 710 299 50 54 chr17 86209444 86209802 -9062849 + RLTR16 LTR ERVK 23 426 -266 3 1242 351 0 0 0 chr17 86210122 86210161 -9062490 + (GA)n Simple_repeat Simple_repeat 1 39 0 3 1242 2606 246 75 16 chr17 86210161 86210850 -9061801 - Lx6 LINE L1 -822 6638 5909 3 1242 4045 159 88 40 chr17 86210855 86211691 -9060960 - Lx6 LINE L1 -148 5732 4856 3 1242 2067 221 94 9 chr17 86211705 86212217 -9060434 + RMER1C Other Other 465 1133 -209 3 1242 816 157 32 43 chr17 86212226 86212412 -9060239 - Lx6 LINE L1 -2016 3864 3681 3 1242 779 237 81 15 chr17 86212487 86212684 -9059967 - B3 SINE B2 -6 210 1 3 1242 222 118 0 0 chr17 86212704 86212738 -9059913 + (GGAA)n Simple_repeat Simple_repeat 2 35 0 3 1242 2469 152 77 71 chr17 86212742 86213261 -9059390 - RLTR24 LTR ERV1 0 529 8 3 1242 423 0 0 0 chr17 86213428 86213475 -9059176 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 1242 333 0 0 0 chr17 86213475 86213511 -9059140 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1242 207 100 0 0 chr17 86214255 86214285 -9058366 + (T)n Simple_repeat Simple_repeat 1 30 0 3 1242 308 237 0 17 chr17 86216092 86216152 -9056499 - Cheshire DNA MER1_type -2136 284 226 3 1242 378 233 77 70 chr17 86216272 86216415 -9056236 - Cheshire DNA MER1_type -2276 144 1 3 1242 1900 214 129 79 chr17 86218394 86218973 -9053678 + RMER19C LTR ERVK 2 609 -2 3 1242 3015 156 31 25 chr17 86219138 86219657 -9052994 - RLTR11A LTR ERVK 0 528 7 3 1242 3224 26 11 0 chr17 86220706 86221084 -9051567 + L1Md_F2 LINE L1 6200 6581 -1 3 1242 2977 12 0 0 chr17 86221911 86222249 -9050402 - ORR1A0 LTR MaLR -8 338 1 3 1242 210 37 0 0 chr17 86222270 86222297 -9050354 + (CCA)n Simple_repeat Simple_repeat 2 28 0 3 1242 240 238 0 0 chr17 86222440 86222503 -9050148 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1242 506 180 0 22 chr17 86224109 86224200 -9048451 + B1_Mus2 SINE Alu 54 142 -5 3 1242 270 0 0 0 chr17 86224411 86224441 -9048210 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 1242 25 51 0 0 chr17 86224563 86224602 -9048049 + AT_rich Low_complexity Low_complexity 1 39 0 4 1242 941 128 0 14 chr17 86224677 86224820 -9047831 - B1_Mus1 SINE Alu -6 142 2 4 1242 447 19 0 0 chr17 86225182 86225234 -9047417 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 1242 776 265 85 41 chr17 86225567 86225956 -9046695 + L1MEf LINE L1 1007 1412 -4830 4 1242 302 316 58 12 chr17 86225991 86226164 -9046487 + L1MEf LINE L1 1868 2048 -4194 4 1242 5214 156 35 20 chr17 86226166 86227070 -9045581 + Lx5 LINE L1 5823 6810 -240 4 1242 444 19 0 0 chr17 86227070 86227123 -9045528 + (TCTCTG)n Simple_repeat Simple_repeat 6 58 0 4 1242 5214 158 45 22 chr17 86227123 86227356 -9045295 + Lx5 LINE L1 6811 7048 -2 4 1242 3008 130 52 4 chr17 86227369 86227871 -9044780 - RLTR11A LTR ERVK -2 526 1 4 1242 446 49 0 16 chr17 86227871 86227933 -9044718 + (TGG)n Simple_repeat Simple_repeat 3 63 0 4 1242 285 278 0 49 chr17 86227993 86228004 -9044647 + ID_B1 SINE B4 137 176 -116 4 1242 461 177 0 0 chr17 86228004 86228083 -9044568 + B1_Mur3 SINE Alu 70 148 -1 4 1242 285 278 0 49 chr17 86228083 86228097 -9044554 + ID_B1 SINE B4 177 238 -54 4 1242 838 298 104 0 chr17 86228097 86228376 -9044275 + Lx6 LINE L1 7142 7449 -11 4 1242 234 0 0 0 chr17 86228376 86228402 -9044249 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 1242 257 303 0 0 chr17 86228474 86228540 -9044111 + L1MEf LINE L1 2410 2475 -3671 4 1242 388 263 96 9 chr17 86228540 86228655 -9043996 + PB1 SINE Alu 1 125 -2 4 1242 286 232 0 0 chr17 86228664 86228739 -9043912 + ID4 SINE ID 2 76 -76 4 1242 339 277 59 68 chr17 86228755 86228991 -9043660 + L1MEf LINE L1 2469 2702 -3444 4 1242 294 325 42 17 chr17 86229061 86229180 -9043471 - L2a LINE L2 -34 3392 3271 4 1242 549 270 96 102 chr17 86229280 86229573 -9043078 + L1MEf LINE L1 3115 3405 -2741 4 1242 1497 232 79 46 chr17 86229576 86229992 -9042659 - RMER19C LTR ERVK -8 603 174 4 1242 687 304 76 66 chr17 86230065 86230478 -9042173 + L1MEf LINE L1 3516 3908 -2238 4 1242 2122 227 9 122 chr17 86230478 86231166 -9041485 + RMER19C LTR ERVK 2 611 0 4 1242 687 304 76 66 chr17 86231166 86231357 -9041294 + L1MEf LINE L1 3909 4126 -2020 4 1242 717 109 67 0 chr17 86231389 86231508 -9041143 - URR1B DNA MER1_type -1 224 98 4 1242 322 277 76 45 chr17 86231532 86231755 -9040896 + L1MD LINE L1 4145 4374 -1772 4 1242 283 280 138 14 chr17 86231860 86232005 -9040646 + L1MD LINE L1 4994 5156 -990 4 1242 274 206 42 42 chr17 86232056 86232127 -9040524 - MIR SINE MIR -163 99 29 4 1242 3174 71 0 0 chr17 86232394 86232831 -9039820 - L1Md_T LINE L1 0 6582 6176 4 1242 300 215 25 25 chr17 86233225 86233306 -9039345 + PB1D10 SINE Alu 21 101 -16 4 1242 302 346 45 8 chr17 86233963 86234097 -9038554 + LTR16A LTR ERVL 167 305 -146 4 1242 255 224 95 79 chr17 86234261 86234387 -9038264 + MER94 DNA AcHobo 6 133 -1 4 1242 1671 262 19 88 chr17 86235152 86235678 -9036973 - Tigger6b DNA MER2_type 0 1597 1108 4 1242 833 299 111 35 chr17 86235795 86236218 -9036433 - Tigger6b DNA MER2_type -935 662 208 4 1242 230 231 200 18 chr17 86236297 86236407 -9036244 + Tigger6b DNA MER2_type 10 139 -1458 4 1242 479 273 93 0 chr17 86236371 86236510 -9036141 - Tigger6b DNA MER2_type -1444 153 2 4 1242 689 344 26 0 chr17 86236600 86236827 -9035824 - B4 SINE B4 -35 257 25 4 1242 290 91 18 0 chr17 86237088 86237143 -9035508 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 1242 2173 165 5 39 chr17 86238073 86238458 -9034193 - MTC LTR MaLR -49 372 1 4 1242 373 336 9 9 chr17 86238480 86238588 -9034063 - RSINE1 SINE B4 -17 148 41 4 1242 322 290 144 7 chr17 86238714 86238853 -9033798 + MIR SINE MIR 51 208 -54 4 1242 279 311 65 9 chr17 86239129 86239236 -9033415 - MLT1K LTR MaLR -9 586 474 4 1242 285 29 0 0 chr17 86239361 86239395 -9033256 + (GA)n Simple_repeat Simple_repeat 1 34 0 4 1242 863 166 50 13 chr17 86239617 86239776 -9032875 - RLTR20B2 LTR ERVK -392 168 4 4 1242 307 290 81 74 chr17 86239820 86239969 -9032682 + B3A SINE B2 67 216 0 4 1242 345 176 73 0 chr17 86239979 86240047 -9032604 + L1MB1 LINE L1 4161 4233 -1907 4 1242 1007 229 14 5 chr17 86240238 86240449 -9032202 + B3 SINE B2 3 215 -1 4 1242 277 242 0 16 chr17 86240491 86240554 -9032097 + ID4_ SINE ID 4 65 -18 4 1242 314 271 84 0 chr17 86240559 86240714 -9031937 + L1MB1 LINE L1 4262 4429 -1717 4 1242 227 217 50 0 chr17 86240726 86240786 -9031865 + Lx6 LINE L1 7376 7438 -22 4 1242 310 303 96 72 chr17 86240794 86240961 -9031690 + L1MD LINE L1 4419 4589 -1557 4 1242 213 39 0 0 chr17 86240998 86241024 -9031627 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 1242 1002 280 18 15 chr17 86241044 86241316 -9031335 - B4 SINE B4 -18 274 2 4 1242 813 270 121 41 chr17 86241333 86241773 -9030878 + L1MB1 LINE L1 4595 5069 -1071 4 1242 1795 259 117 42 chr17 86241778 86242623 -9030028 + L1MB1 LINE L1 5193 6107 -61 4 1242 1683 150 252 32 chr17 86242623 86242968 -9029683 + MTC LTR MaLR 1 421 0 4 1242 1795 264 121 47 chr17 86242968 86243028 -9029623 + L1MB1 LINE L1 6108 6165 -3 4 1242 343 277 46 72 chr17 86243559 86243711 -9028940 + MIR SINE MIR 109 256 -6 4 155 1688 203 113 9 chr17 86245177 86245556 -9027095 - MTD LTR MaLR -16 403 1 4 1243 231 326 92 85 chr17 86245616 86245757 -9026894 + MIRb SINE MIR 14 155 -113 4 1243 285 250 11 11 chr17 86245963 86246052 -9026599 + L1MB4 LINE L1 5988 6076 -104 4 1243 338 310 93 47 chr17 86246116 86246309 -9026342 - MIR SINE MIR -16 246 45 4 1243 242 273 203 0 chr17 86247303 86247431 -9025220 + MIR SINE MIR 12 165 -97 4 1243 378 247 196 58 chr17 86247577 86247852 -9024799 - L1MB8 LINE L1 -2 6176 5864 4 1243 316 263 16 88 chr17 86247970 86248095 -9024556 - PB1D10 SINE Alu 0 117 2 4 1243 729 270 134 16 chr17 86248128 86248501 -9024150 - L1MB8 LINE L1 -512 5672 5256 4 1243 643 253 55 44 chr17 86248576 86248758 -9023893 - B3A SINE B2 -12 186 3 4 1243 592 231 13 45 chr17 86249225 86249379 -9023272 + B1F2 SINE Alu 1 149 0 4 1243 863 217 11 39 chr17 86249447 86249629 -9023022 + B3 SINE B2 35 211 -5 4 1243 204 200 0 0 chr17 86249634 86249679 -9022972 + GA-rich Low_complexity Low_complexity 1 45 0 4 1243 189 107 0 0 chr17 86249679 86249707 -9022944 + (ATG)n Simple_repeat Simple_repeat 3 30 0 4 1243 713 200 193 30 chr17 86250103 86250396 -9022255 - MTEb LTR MaLR -11 368 1 4 1243 310 277 0 98 chr17 86250588 86250680 -9021971 - MTEa LTR MaLR -296 83 1 4 1243 763 285 45 10 chr17 86251089 86251291 -9021360 + B3 SINE B2 8 216 0 4 1243 529 301 30 24 chr17 86251688 86251855 -9020796 + B3A SINE B2 1 168 -30 4 1243 213 39 0 0 chr17 86252340 86252366 -9020285 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1243 732 216 151 5 chr17 86253061 86253247 -9019404 - B3 SINE B2 -2 214 2 4 1243 930 143 20 0 chr17 86253376 86253523 -9019128 - B1_Mur4 SINE Alu 0 150 1 4 1243 523 338 54 76 chr17 86253631 86254041 -9018610 - MLT1C LTR MaLR -8 459 59 4 1243 657 257 71 39 chr17 86254315 86254446 -9018205 + B3A SINE B2 9 149 -49 4 1243 395 19 19 0 chr17 86254446 86254498 -9018153 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 1243 657 257 71 39 chr17 86254498 86254548 -9018103 + B3A SINE B2 150 196 -2 4 1243 420 97 0 0 chr17 86254760 86254822 -9017829 + (CA)n Simple_repeat Simple_repeat 2 63 0 4 1243 240 311 45 54 chr17 86254830 86254901 -9017750 + RSINE1 SINE B4 53 122 -43 4 1243 248 0 31 0 chr17 86254901 86254933 -9017718 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1243 240 311 45 54 chr17 86254933 86254973 -9017678 + RSINE1 SINE B4 123 163 -2 4 1243 308 306 219 56 chr17 86255027 86255369 -9017282 + Charlie2a DNA MER1_type 1718 2115 -746 4 1243 482 318 111 35 chr17 86255508 86255968 -9016683 + Charlie2a DNA MER1_type 2274 2768 -93 4 1243 2719 24 0 42 chr17 86256032 86256386 -9016265 - MT-int LTR MaLR -60 1038 700 4 1243 207 231 0 71 chr17 86256447 86256503 -9016148 + G-rich Low_complexity Low_complexity 4 55 0 4 1243 378 0 0 0 chr17 86256562 86256604 -9016047 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 1243 226 171 0 0 chr17 86256685 86256726 -9015925 + Lx8 LINE L1 7431 7471 -2 4 1243 411 74 24 12 chr17 86257864 86257946 -9014705 + (CAAA)n Simple_repeat Simple_repeat 2 84 0 4 1243 603 27 0 0 chr17 86258187 86258260 -9014391 + (CATAT)n Simple_repeat Simple_repeat 3 75 0 4 1243 531 0 0 0 chr17 86258648 86258707 -9013944 + (GA)n Simple_repeat Simple_repeat 2 60 0 4 1243 259 225 38 0 chr17 86258710 86258790 -9013861 + L1M5 LINE L1 3891 3973 -2173 4 1243 375 164 0 0 chr17 86260201 86260305 -9012346 + A-rich Low_complexity Low_complexity 4 107 0 4 1243 1889 176 51 22 chr17 86261455 86261810 -9010841 - ORR1B2 LTR MaLR 0 367 3 4 1243 270 0 0 0 chr17 86262454 86262484 -9010167 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1243 463 270 73 73 chr17 86262529 86262693 -9009958 - RSINE1 SINE B4 0 165 2 4 1243 21 0 0 0 chr17 86262876 86262897 -9009754 + AT_rich Low_complexity Low_complexity 1 21 0 4 1243 260 321 73 15 chr17 86263285 86263421 -9009230 - Lx8 LINE L1 -450 7023 6880 4 1243 614 323 5 5 chr17 86263408 86263595 -9009056 + Lx8 LINE L1 6700 6886 -587 4 1243 282 368 78 7 chr17 86263901 86264054 -9008597 - MIR SINE MIR 0 262 99 4 1243 423 0 0 0 chr17 86264566 86264613 -9008038 + (GGAA)n Simple_repeat Simple_repeat 3 49 0 4 1243 524 280 84 0 chr17 86264679 86264822 -9007829 + B4A SINE B4 118 272 -20 4 1243 333 100 0 0 chr17 86264892 86264942 -9007709 + (GA)n Simple_repeat Simple_repeat 2 51 0 4 1243 226 278 139 0 chr17 86266144 86266216 -9006435 + L2c LINE L2 3298 3379 -8 4 1243 534 334 131 33 chr17 86266287 86266781 -9005870 + L2a LINE L2 2877 3423 -3 4 1243 336 148 0 0 chr17 86269038 86269099 -9003552 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 1243 581 277 55 93 chr17 86269139 86269430 -9003221 - B4A SINE B4 -10 282 3 4 1243 2524 116 37 12 chr17 86271550 86271953 -9000698 + MTC LTR MaLR 1 413 -8 4 1243 403 365 22 6 chr17 86274661 86274840 -8997811 + MLT1H LTR MaLR 162 343 -206 4 1243 307 355 40 76 chr17 86274924 86275174 -8997477 + MIRb SINE MIR 3 243 -25 4 1243 296 395 0 32 chr17 86275270 86275393 -8997258 + RSINE1 SINE B4 31 149 -16 4 1243 27 0 0 0 chr17 86275426 86275453 -8997198 + AT_rich Low_complexity Low_complexity 1 27 0 4 1243 444 228 21 11 chr17 86275649 86275742 -8996909 - MTE2b LTR MaLR -16 363 270 4 1243 231 304 110 25 chr17 86275784 86275902 -8996749 - MTE2b LTR MaLR -206 164 37 4 1243 239 79 0 26 chr17 86276663 86276702 -8995949 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 4 1243 345 216 72 92 chr17 86277803 86277956 -8994695 + L1M4b LINE L1 2209 2358 -4976 4 1243 220 330 148 2 chr17 86277966 86278125 -8994526 - MIRb SINE MIR -34 234 61 5 1243 1903 130 54 16 chr17 86278948 86279261 -8993390 + ORR1A4 LTR MaLR 5 329 0 5 1243 218 254 0 125 chr17 86279984 86280056 -8992595 + MIRm SINE MIR 124 186 -90 5 1243 321 26 0 0 chr17 86280139 86280177 -8992474 + (TTG)n Simple_repeat Simple_repeat 2 39 0 5 1243 686 270 107 41 chr17 86282517 86282787 -8989864 + MLT2C2 LTR ERVL 1 288 -176 5 1243 314 256 60 93 chr17 86283107 86283150 -8989501 + ID_B1 SINE B4 46 143 -149 5 1243 554 146 34 0 chr17 86283150 86283239 -8989412 + B1_Mus1 SINE Alu 2 93 -55 5 1243 260 304 175 10 chr17 86283233 86283336 -8989315 - RSINE1 SINE B4 -44 121 2 5 1243 314 256 60 93 chr17 86283239 86283258 -8989393 + ID_B1 SINE B4 144 191 -101 5 1243 730 135 101 23 chr17 86283524 86283653 -8988998 - B1_Mus2 SINE Alu 0 147 9 5 1243 326 171 163 102 chr17 86283572 86283670 -8988981 - MT2B LTR ERVL -344 257 154 5 1243 281 338 89 82 chr17 86284300 86284603 -8988048 + ORR1D1 LTR MaLR 15 319 -55 5 1243 366 250 0 0 chr17 86284644 86284720 -8987931 - ID4_ SINE ID -5 78 3 5 1243 232 250 14 72 chr17 86284726 86284795 -8987856 - PB1 SINE Alu -2 125 61 5 1243 842 164 50 0 chr17 86286938 86287078 -8985573 + B1_Mur1 SINE Alu 1 147 -2 5 1243 951 139 0 0 chr17 86287652 86287818 -8984833 + (TCTA)n Simple_repeat Simple_repeat 3 168 0 5 1243 272 321 67 82 chr17 86290287 86290555 -8982096 - L4 LINE RTE -113 1916 1653 5 1243 239 342 51 0 chr17 86291383 86291500 -8981151 + MIRb SINE MIR 30 152 -116 5 1243 322 198 25 25 chr17 86291901 86292020 -8980631 + (TAA)n Simple_repeat Simple_repeat 2 120 0 5 1243 264 333 61 23 chr17 86293235 86293367 -8979284 - MIRb SINE MIR -13 255 119 5 1243 368 271 32 101 chr17 86293564 86293753 -8978898 + MLT1H LTR MaLR 374 549 0 5 1243 195 364 0 13 chr17 86293758 86293836 -8978815 - MIRc SINE MIR -142 126 50 5 1243 1358 155 14 5 chr17 86293882 86294102 -8978549 - URR1B DNA MER1_type -3 222 1 5 1243 552 242 45 0 chr17 86294995 86295127 -8977524 - B1F2 SINE Alu -11 138 1 5 1243 24 0 0 0 chr17 86297315 86297339 -8975312 + AT_rich Low_complexity Low_complexity 1 24 0 5 1243 434 301 123 18 chr17 86297339 86297834 -8974817 + L1MB2 LINE L1 5156 5746 -425 5 1243 234 389 11 0 chr17 86297834 86297924 -8974727 + MLT1A0 LTR MaLR 227 317 -48 5 1243 740 250 111 33 chr17 86297961 86298274 -8974377 + L1MB2 LINE L1 5773 6097 -215 5 1243 259 287 72 64 chr17 86299661 86299796 -8972855 + MIRc SINE MIR 34 174 -94 5 1243 798 248 132 10 chr17 86299992 86300196 -8972455 + B4A SINE B4 1 229 -63 5 1243 535 246 8 157 chr17 86300170 86300200 -8972451 + B4A SINE B4 71 122 -170 5 1243 845 161 15 0 chr17 86300200 86300337 -8972314 + B1_Mus2 SINE Alu 9 147 0 5 1243 535 246 8 157 chr17 86300337 86300431 -8972220 + B4A SINE B4 123 292 0 5 1243 504 160 0 0 chr17 86300431 86300550 -8972101 + (CA)n Simple_repeat Simple_repeat 1 119 0 5 1243 234 235 88 48 chr17 86300587 86300712 -8971939 + MER33 DNA MER1_type 160 289 -35 5 1243 185 289 109 22 chr17 86300900 86300992 -8971659 + L2 LINE L2 59 158 -3261 5 1243 214 319 84 50 chr17 86301001 86301120 -8971531 - MIRb SINE MIR -121 147 25 5 1243 369 0 0 0 chr17 86302347 86302388 -8970263 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1243 1012 124 7 0 chr17 86302529 86302674 -8969977 - B1_Mur3 SINE Alu -3 146 1 5 1243 528 241 217 15 chr17 86302681 86302879 -8969772 + MER33 DNA MER1_type 60 297 -27 5 1243 1232 212 155 7 chr17 86303874 86304183 -8968468 - ORR1D2 LTR MaLR -14 356 2 5 1243 247 233 109 62 chr17 86304190 86304318 -8968333 + ORR1E LTR MaLR 8 141 -218 5 1243 610 197 7 7 chr17 86304579 86304722 -8967929 + CT-rich Low_complexity Low_complexity 2 144 0 5 1243 971 126 7 34 chr17 86304724 86304872 -8967779 - B1_Mur3 SINE Alu 0 149 6 5 1243 229 158 0 73 chr17 86304847 86304888 -8967763 - MT2B LTR ERVL -314 287 250 5 1243 252 0 0 0 chr17 86305832 86305860 -8966791 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1243 456 327 100 87 chr17 86306475 86306864 -8965787 + MLT1A1 LTR MaLR 3 396 -12 5 1243 182 325 100 0 chr17 86308266 86308346 -8964305 + MIRm SINE MIR 170 257 -19 5 1243 186 260 69 148 chr17 86308627 86308830 -8963821 - L3 LINE CR1 -796 3693 3507 5 1243 306 198 29 4 chr17 86309228 86309308 -8963343 - L1MC3 LINE L1 -15 7770 7702 5 1243 2098 58 112 39 chr17 86309332 86309668 -8962983 - RLTR10B2 LTR ERVK -1 389 1 5 1243 1850 265 26 30 chr17 86309668 86310155 -8962496 + RLTR16 LTR ERVK 21 505 0 5 1243 1980 175 138 47 chr17 86311322 86311709 -8960942 + RCHARR1 DNA MER1_type 439 858 -116 5 1243 1467 184 161 27 chr17 86311709 86312039 -8960612 + ORR1D1 LTR MaLR 1 374 0 5 1243 1980 175 138 47 chr17 86312039 86312142 -8960509 + RCHARR1 DNA MER1_type 859 974 0 5 1243 209 176 19 38 chr17 86312887 86312940 -8959711 + C-rich Low_complexity Low_complexity 2 53 0 5 1243 451 318 96 54 chr17 86313361 86313694 -8958957 - L2a LINE L2 -1 3425 3079 5 1243 405 0 0 0 chr17 86313896 86313941 -8958710 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1243 202 333 17 0 chr17 86314021 86314081 -8958570 - L2a LINE L2 -871 2548 2488 5 1243 1009 309 219 10 chr17 86314084 86314998 -8957653 - L2a LINE L2 -1193 2226 1122 5 1243 243 295 25 15 chr17 86316167 86316277 -8956374 - MIRb SINE MIR -66 202 86 5 1243 573 335 46 0 chr17 86316771 86316968 -8955683 + MER20 DNA MER1_type 9 214 -5 5 1243 241 245 0 36 chr17 86317395 86317450 -8955201 + MTE2a LTR MaLR 280 332 -47 5 1243 671 147 210 0 chr17 86318070 86318213 -8954438 + URR1B DNA MER1_type 49 221 -4 5 1243 832 155 260 6 chr17 86318214 86318383 -8954268 + B3 SINE B2 1 212 -4 5 1243 532 297 198 26 chr17 86318597 86318905 -8953746 + MLT1D LTR MaLR 137 497 -8 5 1243 423 0 0 0 chr17 86318932 86318979 -8953672 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1243 358 315 163 50 chr17 86320337 86320719 -8951932 + L2c LINE L2 2948 3380 -7 5 1243 649 277 32 0 chr17 86321211 86321366 -8951285 - MTEa LTR MaLR -219 160 1 5 1243 224 268 31 146 chr17 86321451 86321547 -8951104 + B1F2 SINE Alu 14 98 -51 5 1243 226 290 0 0 chr17 86321639 86321701 -8950950 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 1243 387 0 0 0 chr17 86322404 86322447 -8950204 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 1243 578 349 25 57 chr17 86323486 86323766 -8948885 - MLT1D LTR MaLR -184 321 51 5 1243 1211 273 166 73 chr17 86325087 86325882 -8946769 + Lx8 LINE L1 6256 7124 -349 5 1243 461 365 68 88 chr17 86326268 86326585 -8946066 - MLT1D-int LTR MaLR -415 972 668 5 1243 484 185 12 0 chr17 86326585 86326666 -8945985 + ID4 SINE ID 2 83 0 5 1243 461 365 68 88 chr17 86326666 86327006 -8945645 - MLT1D-int LTR MaLR -720 667 329 5 1243 463 282 108 36 chr17 86327460 86327655 -8944996 - B4A SINE B4 -83 209 1 5 1243 401 207 59 12 chr17 86327656 86327758 -8944893 - B1F2 SINE Alu -1 116 5 5 1243 250 303 25 2 chr17 86328658 86328753 -8943898 + MIR SINE MIR 44 139 -129 5 1243 192 374 24 0 chr17 86329014 86329097 -8943554 + MIRm SINE MIR 78 162 -114 5 1243 415 193 266 0 chr17 86332797 86332906 -8939745 - B1_Mur2 SINE Alu 0 149 12 5 1243 239 0 32 0 chr17 86332943 86332974 -8939677 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 5 1243 22 35 0 0 chr17 86334489 86334518 -8938133 + AT_rich Low_complexity Low_complexity 1 29 0 5 1243 220 342 12 25 chr17 86335281 86335362 -8937289 + PB1D7 SINE Alu 18 97 -23 5 1243 333 100 0 0 chr17 86336012 86336062 -8936589 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1243 2883 233 105 23 chr17 86336195 86337080 -8935571 - RMER1C Other Other -1 1341 67 5 1243 240 290 10 31 chr17 86337172 86337268 -8935383 - L1MA5 LINE L1 0 6300 6207 5 1243 678 269 17 70 chr17 86337312 86337484 -8935167 + RSINE1 SINE B4 3 165 0 5 1243 210 71 0 0 chr17 86337567 86337595 -8935056 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1243 1576 37 5 10 chr17 86337614 86337807 -8934844 - B2_Mm1t SINE B2 0 193 2 5 1243 21 57 0 0 chr17 86339512 86339547 -8933104 + AT_rich Low_complexity Low_complexity 1 35 0 5 1243 396 296 29 29 chr17 86339609 86339628 -8933023 + ID SINE ID 65 83 -141 5 1243 595 212 42 0 chr17 86339628 86339746 -8932905 + B1_Mur1 SINE Alu 1 123 -26 5 1243 186 43 0 0 chr17 86339885 86339908 -8932743 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 5 1243 24 0 0 0 chr17 86340146 86340170 -8932481 + AT_rich Low_complexity Low_complexity 1 24 0 5 1243 507 239 113 0 chr17 86340170 86340312 -8932339 - RSINE1 SINE B4 -4 161 4 5 1243 476 258 106 135 chr17 86341421 86341770 -8930881 + ORR1E LTR MaLR 13 351 -8 5 1243 256 273 8 76 chr17 86342013 86342132 -8930519 - ORR1B2 LTR MaLR -204 163 53 5 1243 285 266 25 0 chr17 86342162 86342241 -8930410 - ORR1E LTR MaLR -234 125 45 5 1243 459 0 0 0 chr17 86343600 86343651 -8929000 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1243 285 303 0 0 chr17 86345045 86345111 -8927540 + L2b LINE L2 3309 3374 -1 5 1243 415 316 61 0 chr17 86345177 86345275 -8927376 - RSINE1 SINE B4 -60 105 2 5 1243 265 314 131 0 chr17 86345318 86345455 -8927196 + MIR SINE MIR 5 159 -103 5 1243 341 288 27 155 chr17 86345627 86345775 -8926876 + ID_B1 SINE B4 48 176 -48 5 1243 447 289 19 19 chr17 86345685 86345791 -8926860 + PB1D10 SINE Alu 6 111 -6 5 1243 512 143 16 32 chr17 86345798 86345921 -8926730 + GA-rich Low_complexity Low_complexity 4 124 0 5 1243 422 281 16 0 chr17 86345944 86346072 -8926579 + L1M3 LINE L1 5408 5537 -643 5 1243 278 262 44 97 chr17 86346104 86346218 -8926433 + PB1D10 SINE Alu 2 109 -8 6 1243 274 259 12 58 chr17 86346302 86346388 -8926263 + L1MB8 LINE L1 5898 5979 -199 6 1243 580 267 113 20 chr17 86346446 86346641 -8926010 - ID_B1 SINE B4 0 224 12 6 1243 200 358 169 29 chr17 86346893 86347100 -8925551 - MIRc SINE MIR -26 242 7 6 1243 23 0 0 0 chr17 86349558 86349581 -8923070 + AT_rich Low_complexity Low_complexity 1 23 0 6 1243 468 0 0 0 chr17 86349993 86350045 -8922606 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 1243 604 227 34 54 chr17 86351461 86351610 -8921041 - B1F2 SINE Alu 0 149 4 6 1243 405 0 0 0 chr17 86351764 86351809 -8920842 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1243 632 174 81 12 chr17 86351969 86352133 -8920518 + ORR1C2 LTR MaLR 1 100 -284 6 1243 2602 75 1 1 chr17 86352134 86352534 -8920117 - Lx LINE L1 -749 5905 5506 6 1243 7037 113 42 1 chr17 86352537 86353569 -8919082 + Lx2 LINE L1 5907 6980 -17 6 1243 216 0 0 0 chr17 86353572 86353596 -8919055 + (GAAA)n Simple_repeat Simple_repeat 3 26 0 6 1243 1180 211 41 48 chr17 86353596 86353865 -8918786 + ORR1C2 LTR MaLR 111 377 -7 6 1243 1097 52 0 29 chr17 86353866 86354005 -8918646 + B1_Mus1 SINE Alu 1 135 -13 6 1243 291 28 0 0 chr17 86354005 86354041 -8918610 + (CAA)n Simple_repeat Simple_repeat 1 36 0 6 1243 939 57 0 0 chr17 86354235 86354357 -8918294 + (CA)n Simple_repeat Simple_repeat 1 122 0 6 1243 26 30 0 0 chr17 86355396 86355429 -8917222 + AT_rich Low_complexity Low_complexity 1 33 0 6 1243 250 312 239 0 chr17 86356032 86356141 -8916510 + Arthur1B DNA Tip100 225 359 -866 6 1243 21 0 0 0 chr17 86356378 86356399 -8916252 + AT_rich Low_complexity Low_complexity 1 21 0 6 1243 366 107 0 0 chr17 86356791 86356847 -8915804 + (CATAG)n Simple_repeat Simple_repeat 1 56 0 6 1243 328 326 42 63 chr17 86357131 86357321 -8915330 - L1MC4 LINE L1 -4448 1767 1582 6 1243 253 189 0 0 chr17 86357494 86357547 -8915104 - L1MC4 LINE L1 -4966 1345 1293 6 1243 447 318 12 61 chr17 86357719 86357883 -8914768 + Charlie2b DNA MER1_type 42 197 -2585 6 1243 256 145 15 46 chr17 86358415 86358480 -8914171 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 6 1243 480 312 58 6 chr17 86358560 86358734 -8913917 + Charlie2b DNA MER1_type 411 593 -2189 6 1243 1650 320 171 53 chr17 86358826 86359007 -8913644 + Charlie2b DNA MER1_type 750 930 -1852 6 1243 456 62 0 0 chr17 86359007 86359071 -8913580 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 6 1243 1650 320 171 53 chr17 86359071 86359087 -8913564 + Charlie2b DNA MER1_type 931 941 -1841 6 1243 210 37 0 0 chr17 86359087 86359114 -8913537 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 1243 1650 320 171 53 chr17 86359114 86360157 -8912494 + Charlie2b DNA MER1_type 942 2168 -614 6 1243 1500 53 0 11 chr17 86360157 86360347 -8912304 - B2_Mm2 SINE B2 -7 188 1 6 1243 1650 320 171 53 chr17 86360347 86360722 -8911929 + Charlie2b DNA MER1_type 2169 2559 -223 6 1243 650 216 60 0 chr17 86360722 86360856 -8911795 - B1_Mur1 SINE Alu -5 144 3 6 1243 1650 320 171 53 chr17 86360856 86360891 -8911760 + Charlie2b DNA MER1_type 2560 2596 -186 6 1243 560 276 92 127 chr17 86360858 86361260 -8911391 + MER63C DNA AcHobo 332 719 -211 6 1243 280 285 114 33 chr17 86361452 86361874 -8910777 - L1MDa LINE L1 -4028 2605 2149 6 1243 387 220 44 0 chr17 86361909 86362000 -8910651 - PB1D10 SINE Alu -18 99 5 6 1243 312 364 76 4 chr17 86362049 86362286 -8910365 - L1MC LINE L1 -2465 3681 3428 6 1243 1679 132 12 81 chr17 86362417 86362763 -8909888 - RLTRETN_Mm LTR ERVK 0 322 1 6 1243 252 308 19 0 chr17 86362976 86363083 -8909568 + L1M7 LINE L1 944 1052 -4993 6 1243 370 333 42 0 chr17 86363426 86363591 -8909060 + HAL1 LINE L1 1540 1711 -796 6 1243 206 32 32 0 chr17 86364385 86364416 -8908235 + (CTAAA)n Simple_repeat Simple_repeat 4 35 0 6 1243 201 159 0 0 chr17 86364992 86365036 -8907615 + (CCAA)n Simple_repeat Simple_repeat 2 45 0 6 1243 739 246 119 34 chr17 86365100 86365369 -8907282 + B4A SINE B4 1 292 0 6 1243 358 159 14 0 chr17 86365425 86365494 -8907157 + L1MB8 LINE L1 6109 6178 0 6 1243 578 300 85 57 chr17 86365844 86366350 -8906301 + L1M7 LINE L1 1280 2000 -4661 6 1243 981 203 64 0 chr17 86366387 86366589 -8906062 + B3 SINE B2 2 216 0 6 1243 660 307 112 48 chr17 86366952 86367263 -8905388 - MER2B DNA MER2_type -5 331 1 6 1243 194 81 27 0 chr17 86368092 86368129 -8904522 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 1243 24 0 0 0 chr17 86368283 86368307 -8904344 + AT_rich Low_complexity Low_complexity 1 24 0 6 1243 1280 299 27 22 chr17 86368308 86368718 -8903933 + Lx7 LINE L1 6473 6884 -812 6 1243 2200 229 75 92 chr17 86368701 86369394 -8903257 + Lx8 LINE L1 6430 7110 -363 6 1243 675 201 13 9 chr17 86369943 86370176 -8902475 + CT-rich Low_complexity Low_complexity 1 234 0 6 1243 355 350 109 56 chr17 86371083 86371422 -8901229 + L1M4b LINE L1 2766 3122 -4212 6 1243 326 297 67 7 chr17 86371423 86371572 -8901079 + L1M4b LINE L1 4523 4680 -2326 6 1243 549 303 45 78 chr17 86371598 86371929 -8900722 - MLT1C LTR MaLR -76 314 1 6 1243 1078 259 122 70 chr17 86371949 86372718 -8899933 + L1M4b LINE L1 4680 5510 -1496 6 1243 1199 40 0 0 chr17 86372718 86372866 -8899785 + L1Md_A LINE L1 6435 6582 0 6 1243 1078 256 114 79 chr17 86372866 86372999 -8899652 + L1M4b LINE L1 5511 5642 -1364 6 1243 397 275 102 15 chr17 86373149 86373345 -8899306 + Lx7 LINE L1 7212 7424 -272 6 1243 333 0 0 0 chr17 86373355 86373392 -8899259 + (GA)n Simple_repeat Simple_repeat 1 37 0 6 1243 293 245 129 90 chr17 86373452 86373685 -8898966 + L1MB8 LINE L1 4733 4974 -1172 6 1243 383 301 9 19 chr17 86373745 86373850 -8898801 - PB1D10 SINE Alu -5 112 9 6 1243 565 278 98 54 chr17 86374007 86374304 -8898347 + L1MB8 LINE L1 5794 6103 -75 6 1243 511 239 9 0 chr17 86374340 86374449 -8898202 - PB1D10 SINE Alu -5 112 3 6 1243 204 40 0 0 chr17 86375165 86375190 -8897461 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 6 1243 1218 77 0 0 chr17 86375190 86375346 -8897305 - B2_Mm2 SINE B2 -34 161 6 6 155 994 280 98 14 chr17 86376241 86376589 -8896062 + MTEa LTR MaLR 3 379 0 6 1244 180 0 0 0 chr17 86376907 86376927 -8895724 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 6 1244 1180 75 0 0 chr17 86377322 86377469 -8895182 + B1_Mus1 SINE Alu 2 148 0 6 1244 548 263 139 6 chr17 86379358 86379538 -8893113 - B3 SINE B2 -11 205 2 6 1244 275 288 12 0 chr17 86379740 86379820 -8892831 - L2a LINE L2 -1 3425 3345 6 1244 711 0 0 0 chr17 86380015 86380094 -8892557 + (GA)n Simple_repeat Simple_repeat 2 80 0 6 1244 396 318 86 71 chr17 86380439 86380487 -8892164 + L2 LINE L2 2358 2399 -1020 6 1244 914 238 78 98 chr17 86380487 86380874 -8891777 + MTE2a LTR MaLR 1 379 0 6 1244 396 318 86 71 chr17 86380874 86381035 -8891616 + L2 LINE L2 2400 2570 -849 6 1244 611 247 144 17 chr17 86381105 86381278 -8891373 - B3A SINE B2 -3 195 1 6 1244 35 24 0 0 chr17 86382094 86382136 -8890515 + AT_rich Low_complexity Low_complexity 1 42 0 6 1244 306 306 23 31 chr17 86382329 86382392 -8890259 - Lx7 LINE L1 -383 7313 7251 6 1244 2991 32 12 0 chr17 86382392 86382734 -8889917 - ORR1A0 LTR MaLR 0 346 1 6 1244 306 306 23 31 chr17 86382734 86382798 -8889853 - Lx7 LINE L1 -446 7250 7187 6 1244 251 292 265 29 chr17 86382805 86383077 -8889574 + L2 LINE L2 1621 1956 -1463 6 1244 2673 100 34 20 chr17 86389139 86389547 -8883104 - L1_Mus3 LINE L1 -1 6637 6224 6 1244 21 0 0 0 chr17 86393021 86393042 -8879609 + AT_rich Low_complexity Low_complexity 1 21 0 6 1244 213 337 42 32 chr17 86394339 86394434 -8878217 - B4A SINE B4 -139 153 58 6 1244 315 238 75 19 chr17 86396520 86396627 -8876024 + L2 LINE L2 2694 2806 -613 6 1244 6840 244 67 57 chr17 86396713 86397548 -8875103 - MYSERV-int LTR ERVK -3203 3347 2549 6 1244 1219 30 0 0 chr17 86397548 86397682 -8874969 + B1_Mus1 SINE Alu 5 138 -10 6 1244 261 0 0 0 chr17 86397682 86397711 -8874940 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1244 6840 254 64 60 chr17 86397711 86399148 -8873503 - MYSERV-int LTR ERVK -4002 2548 1066 6 1244 2559 195 28 26 chr17 86400043 86400287 -8872364 + RLTR20B3 LTR ERVK 1 244 -333 6 1244 411 21 0 0 chr17 86400287 86400335 -8872316 + (GGA)n Simple_repeat Simple_repeat 2 49 0 6 1244 2559 195 28 26 chr17 86400335 86400627 -8872024 + RLTR20B3 LTR ERVK 245 537 -40 6 1244 4031 164 127 65 chr17 86401343 86401931 -8870720 - RMER19B LTR ERVK 0 902 244 6 1244 405 0 0 0 chr17 86401931 86401976 -8870675 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1244 4031 164 127 65 chr17 86401976 86402236 -8870415 - RMER19B LTR ERVK -659 243 3 6 1244 374 70 0 34 chr17 86402521 86402580 -8870071 + (GAGAA)n Simple_repeat Simple_repeat 2 58 0 6 1244 1183 83 7 0 chr17 86402687 86402832 -8869819 - B1_Mus2 SINE Alu 0 147 2 6 1244 294 226 85 11 chr17 86403524 86403618 -8869033 + Charlie9 DNA MER1_type 746 846 -1911 6 1244 329 284 48 34 chr17 86403713 86403859 -8868792 + Charlie9 DNA MER1_type 1253 1400 -1357 6 1244 554 250 162 13 chr17 86403859 86404167 -8868484 + L1M3 LINE L1 3416 3767 -2379 6 1244 893 180 57 44 chr17 86404169 86404396 -8868255 + RLTR19-int LTR ERVK 1787 2016 -4121 6 1244 361 259 204 65 chr17 86404705 86404891 -8867760 + RMER15 LTR ERVL 347 558 -17 6 1244 369 297 74 37 chr17 86404932 86405149 -8867502 - L1MC4 LINE L1 -196 7846 7622 6 1244 899 168 217 0 chr17 86405342 86405503 -8867148 + B3 SINE B2 5 200 -16 6 1244 211 236 55 0 chr17 86406629 86406684 -8865967 - MIRb SINE MIR -37 231 174 6 1244 198 0 0 0 chr17 86407691 86407713 -8864938 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 6 1244 291 54 0 0 chr17 86409070 86409107 -8863544 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 1244 778 257 162 50 chr17 86409261 86409719 -8862932 + L1MC1 LINE L1 3700 4208 -1938 6 1244 1434 264 124 72 chr17 86409735 86409924 -8862727 + L1MC1 LINE L1 4285 4459 -1687 6 1244 522 0 0 0 chr17 86409924 86409982 -8862669 + (GA)n Simple_repeat Simple_repeat 1 58 0 6 1244 1434 264 124 72 chr17 86409982 86410458 -8862193 + L1MC1 LINE L1 4460 4956 -1190 6 1244 913 199 6 12 chr17 86410458 86410631 -8862020 + Lx5 LINE L1 6878 7049 -1 6 1244 1434 268 126 62 chr17 86410631 86411036 -8861615 + L1MC1 LINE L1 4957 5455 -878 6 1244 897 290 222 12 chr17 86411044 86411606 -8861045 + L1MC1 LINE L1 5636 6315 -18 6 1244 312 313 102 83 chr17 86411809 86412171 -8860480 + L1MEf LINE L1 1657 2025 -5077 6 1244 350 278 122 46 chr17 86412213 86412612 -8860039 + L1MEf LINE L1 2118 2553 -4549 6 1244 368 291 18 29 chr17 86412757 86412927 -8859724 + L1MEf LINE L1 2778 2945 -4157 6 1244 447 240 355 42 chr17 86413091 86413308 -8859343 + B4A SINE B4 2 286 -6 6 1244 12935 112 104 12 chr17 86415464 86416637 -8856014 + L1_Mur1 LINE L1 198 1694 -4192 6 1244 306 0 0 0 chr17 86416637 86416671 -8855980 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 6 1244 12935 72 16 10 chr17 86416671 86416801 -8855850 + L1_Mur1 LINE L1 1695 1836 -4050 6 1244 8726 23 0 3 chr17 86416801 86417749 -8854902 + L1Md_F2 LINE L1 5636 6580 -2 6 1244 12935 72 16 10 chr17 86417749 86418905 -8853746 + L1_Mur1 LINE L1 1837 2987 -2899 6 1244 274 278 28 85 chr17 86419286 86419392 -8853259 + MLT1E1A LTR MaLR 48 147 -533 6 1244 195 265 58 14 chr17 86420165 86420234 -8852417 - MIR SINE MIR -78 184 113 6 1244 463 257 13 97 chr17 86421001 86421156 -8851495 + ID_B1 SINE B4 79 220 -4 6 1244 768 207 14 28 chr17 86421019 86421163 -8851488 + B1_Mur2 SINE Alu 8 149 0 6 1244 427 284 181 20 chr17 86421572 86421853 -8850798 - MLT1F1 LTR MaLR -4 676 331 7 1244 230 204 61 0 chr17 86422388 86422437 -8850214 - PB1D7 SINE Alu -27 93 42 7 1244 407 318 77 32 chr17 86423262 86423418 -8849233 + RSINE1 SINE B4 2 164 -1 7 1244 392 280 136 32 chr17 86424747 86424902 -8847749 - MLT1F1 LTR MaLR -224 243 73 7 1244 279 245 0 50 chr17 86425174 86425271 -8847380 - RMER1C Other Other -18 1324 1244 7 1244 239 273 76 0 chr17 86425375 86425441 -8847210 - Lx8 LINE L1 -233 7240 7170 7 1244 2690 200 49 58 chr17 86425441 86425559 -8847092 - ORR1D1-int LTR MaLR -715 655 540 7 1244 726 12 0 0 chr17 86425559 86425642 -8847009 + (TTTCC)n Simple_repeat Simple_repeat 1 83 0 7 1244 2690 202 53 59 chr17 86425642 86426173 -8846478 - ORR1D1-int LTR MaLR -831 539 4 7 1244 1206 176 209 29 chr17 86426179 86426495 -8846156 - ORR1D1 LTR MaLR -1 373 1 7 1244 231 246 14 28 chr17 86426599 86426670 -8845981 + HAL1 LINE L1 1553 1622 -885 7 1244 396 234 22 0 chr17 86427280 86427379 -8845272 - PB1D9 SINE Alu 0 120 20 7 1244 850 317 70 64 chr17 86427718 86428106 -8844545 + Tigger7 DNA MER2_type 13 402 -2089 7 1244 517 264 86 86 chr17 86428096 86428353 -8844298 + Tigger7 DNA MER2_type 2227 2483 -8 7 1244 414 69 0 0 chr17 86430363 86430421 -8842230 + (CA)n Simple_repeat Simple_repeat 1 58 0 7 1244 258 105 0 0 chr17 86430440 86430478 -8842173 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 7 1244 788 210 33 39 chr17 86434754 86434964 -8837687 + B3 SINE B2 11 195 0 7 1244 21 57 0 0 chr17 86436522 86436557 -8836094 + AT_rich Low_complexity Low_complexity 1 35 0 7 1244 222 37 0 0 chr17 86442293 86442320 -8830331 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 7 1244 237 65 0 0 chr17 86442334 86442365 -8830286 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 7 1244 378 0 0 0 chr17 86442405 86442447 -8830204 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 1244 198 0 0 0 chr17 86443137 86443159 -8829492 + (A)n Simple_repeat Simple_repeat 1 22 0 7 1244 297 0 0 0 chr17 86443612 86443645 -8829006 + (TC)n Simple_repeat Simple_repeat 2 34 0 7 1244 294 29 0 0 chr17 86443645 86443679 -8828972 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1244 262 238 31 31 chr17 86443683 86443748 -8828903 + ID4_ SINE ID 3 67 -16 7 1244 291 140 0 0 chr17 86444082 86444132 -8828519 + (CATA)n Simple_repeat Simple_repeat 2 51 0 7 1244 319 280 42 0 chr17 86444530 86444648 -8828003 + MER5A1 DNA MER1_type 43 165 -1 7 1244 219 376 51 0 chr17 86444678 86444795 -8827856 - MER5A DNA MER1_type -52 137 15 7 1244 244 281 10 101 chr17 86444813 86444912 -8827739 + MER5B DNA MER1_type 50 139 -39 7 1244 336 369 63 19 chr17 86445755 86445962 -8826689 - L1M5 LINE L1 -512 5728 5513 7 1244 1472 194 151 11 chr17 86446646 86447011 -8825640 - MTD LTR MaLR -3 416 1 7 1244 27 49 0 0 chr17 86448142 86448183 -8824468 + AT_rich Low_complexity Low_complexity 1 41 0 7 1244 222 37 0 0 chr17 86448389 86448416 -8824235 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1244 312 286 97 52 chr17 86448811 86448966 -8823685 - ORR1D2 LTR MaLR -4 366 205 7 1244 206 98 0 47 chr17 86449023 86449066 -8823585 + (CAAAA)n Simple_repeat Simple_repeat 5 45 0 7 1244 193 274 213 19 chr17 86449234 86449342 -8823309 + MIR3 SINE MIR 58 186 -22 7 1244 246 322 56 82 chr17 86449406 86449467 -8823184 + B4A SINE B4 46 192 -100 7 1244 595 210 34 0 chr17 86449467 86449586 -8823065 + B1F SINE Alu 20 142 -7 7 1244 246 322 56 82 chr17 86449586 86449602 -8823049 + B4A SINE B4 193 236 -56 7 1244 477 279 10 0 chr17 86449634 86449738 -8822913 - PB1 SINE Alu -11 116 12 7 1244 198 208 0 0 chr17 86450718 86450766 -8821885 + (TA)n Simple_repeat Simple_repeat 2 49 0 7 1244 644 154 153 8 chr17 86450784 86450908 -8821743 - B1F SINE Alu -7 142 1 7 1244 1713 235 52 9 chr17 86451297 86451739 -8820912 + Lx7 LINE L1 6142 6602 -1094 7 1244 1508 213 74 3 chr17 86452016 86452355 -8820296 + Lx7 LINE L1 6589 6951 -745 7 1244 1935 139 93 6 chr17 86452552 86452885 -8819766 + ORR1B2 LTR MaLR 6 367 0 7 1244 1165 213 163 7 chr17 86452934 86453241 -8819410 + MTD LTR MaLR 65 419 0 7 1244 907 260 55 53 chr17 86454051 86454466 -8818185 - L1MB5 LINE L1 -56 6118 5703 7 1244 304 365 64 41 chr17 86454477 86454697 -8817954 - HAL1 LINE L1 -2282 225 1 7 1244 267 301 27 95 chr17 86454887 86455034 -8817617 - MLT1A1 LTR MaLR 0 408 272 7 1244 1353 152 9 18 chr17 86458095 86458322 -8814329 + URR1A DNA MER1_type 2 226 0 7 1244 539 262 19 63 chr17 86458853 86459012 -8813639 + RSINE1 SINE B4 4 155 -10 7 1244 24 0 0 0 chr17 86459021 86459045 -8813606 + AT_rich Low_complexity Low_complexity 1 24 0 7 1244 370 0 40 0 chr17 86460569 86460619 -8812032 + (CAAAAA)n Simple_repeat Simple_repeat 3 54 0 7 1244 259 232 25 51 chr17 86461481 86461599 -8811052 + Lx6 LINE L1 7179 7281 -179 7 1244 238 250 123 57 chr17 86461841 86461947 -8810704 + PB1D7 SINE Alu 1 113 -7 7 1244 207 162 0 0 chr17 86462799 86462836 -8809815 + GA-rich Low_complexity Low_complexity 2 38 0 7 1244 450 127 0 0 chr17 86462871 86462942 -8809709 + (GA)n Simple_repeat Simple_repeat 1 71 0 7 1244 296 322 52 9 chr17 86463470 86463583 -8809068 + ID_B1 SINE B4 99 216 -8 7 1244 212 320 13 0 chr17 86463583 86463658 -8808993 + B3A SINE B2 2 77 -121 7 1244 22 35 0 0 chr17 86463703 86463732 -8808919 + AT_rich Low_complexity Low_complexity 1 29 0 7 1244 910 261 163 16 chr17 86464570 86464889 -8807762 - MTE2b LTR MaLR -12 367 2 7 1244 304 198 78 10 chr17 86465178 86465280 -8807371 + PB1D7 SINE Alu 11 119 -1 7 1244 216 0 0 0 chr17 86465392 86465416 -8807235 + (T)n Simple_repeat Simple_repeat 1 24 0 7 1244 1122 75 7 0 chr17 86465416 86465562 -8807089 - B1_Mus2 SINE Alu 0 147 1 7 1244 538 273 78 12 chr17 86466400 86466567 -8806084 - MER5A DNA MER1_type 0 189 12 7 1244 1027 252 171 0 chr17 86466591 86466901 -8805750 - ORR1D2 LTR MaLR -7 363 1 7 1244 1359 83 5 30 chr17 86467214 86467412 -8805239 + B2_Mm1a SINE B2 1 193 0 7 1244 234 91 0 0 chr17 86467728 86467761 -8804890 + (TCC)n Simple_repeat Simple_repeat 1 33 0 7 1244 503 228 56 24 chr17 86467787 86467913 -8804738 + B1F1 SINE Alu 10 139 -10 7 1244 329 211 244 0 chr17 86468017 86468163 -8804488 - L1MD LINE L1 -825 5321 5143 7 1244 194 62 31 0 chr17 86468206 86468238 -8804413 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 7 1244 1253 254 124 0 chr17 86468349 86468679 -8803972 - MTD LTR MaLR -2 417 47 7 1244 228 67 0 0 chr17 86469007 86469037 -8803614 + (TG)n Simple_repeat Simple_repeat 2 31 0 7 1244 183 80 0 0 chr17 86469979 86470004 -8802647 + (CAG)n Simple_repeat Simple_repeat 2 26 0 7 1244 21 0 0 0 chr17 86471306 86471327 -8801324 + AT_rich Low_complexity Low_complexity 1 21 0 7 1244 473 295 112 22 chr17 86472056 86472323 -8800328 + B4A SINE B4 2 292 0 7 1244 21 36 0 0 chr17 86472401 86472429 -8800222 + AT_rich Low_complexity Low_complexity 1 28 0 7 1244 21 57 0 0 chr17 86472490 86472525 -8800126 + AT_rich Low_complexity Low_complexity 1 35 0 7 1244 201 132 0 0 chr17 86473325 86473363 -8799288 + (TA)n Simple_repeat Simple_repeat 2 39 0 7 1244 1167 82 0 0 chr17 86473943 86474090 -8798561 - B1_Mus2 SINE Alu 0 147 1 7 1244 197 196 0 19 chr17 86474270 86474322 -8798329 + GA-rich Low_complexity Low_complexity 4 54 0 7 1244 1069 193 34 0 chr17 86474352 86474559 -8798092 + B3 SINE B2 3 216 0 7 1244 224 313 157 35 chr17 86479711 86479883 -8792768 - MIR SINE MIR -58 204 12 7 1244 288 375 62 0 chr17 86479917 86480077 -8792574 - MIRb SINE MIR -70 198 29 7 1244 300 91 0 0 chr17 86480336 86480380 -8792271 + (CCA)n Simple_repeat Simple_repeat 1 44 0 7 1244 380 252 41 25 chr17 86481331 86481453 -8791198 - L2a LINE L2 -4 3422 3299 7 1244 443 309 40 0 chr17 86481869 86482018 -8790633 + Kanga1 DNA Tc2 512 666 -1079 7 1244 336 273 252 9 chr17 86482039 86482257 -8790394 + Kanga1 DNA Tc2 1471 1741 -4 7 1244 253 316 165 10 chr17 86482259 86482405 -8790246 - MIR SINE MIR -67 201 40 7 1244 348 242 62 111 chr17 86482545 86482689 -8789962 + ID_B1 SINE B4 86 222 -2 7 1244 557 306 45 0 chr17 86483406 86483563 -8789088 + B3A SINE B2 5 168 -30 7 1244 22 35 0 0 chr17 86483760 86483789 -8788862 + AT_rich Low_complexity Low_complexity 1 29 0 7 1244 24 32 0 0 chr17 86483970 86484001 -8788650 + AT_rich Low_complexity Low_complexity 1 31 0 7 1244 447 194 0 0 chr17 86484025 86484118 -8788533 + (TA)n Simple_repeat Simple_repeat 2 94 0 7 1244 590 209 59 0 chr17 86484122 86484309 -8788342 + L1M4 LINE L1 4282 4479 -1667 7 1244 245 89 0 22 chr17 86484547 86484593 -8788058 + (GGA)n Simple_repeat Simple_repeat 1 45 0 7 1244 374 254 22 7 chr17 86484629 86484768 -8787883 + L1MB8 LINE L1 6033 6173 -5 7 1244 234 0 0 0 chr17 86485044 86485070 -8787581 + (GA)n Simple_repeat Simple_repeat 2 27 0 7 1244 518 272 56 0 chr17 86485226 86485351 -8787300 - ID_B1 SINE B4 -27 197 66 7 1244 221 279 11 34 chr17 86485756 86485845 -8786806 + L2c LINE L2 3301 3387 0 7 1244 381 22 0 0 chr17 86486406 86486452 -8786199 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1244 216 0 0 0 chr17 86486452 86486475 -8786176 + (GA)n Simple_repeat Simple_repeat 1 24 0 7 1244 587 287 101 50 chr17 86487145 86487483 -8785168 + MTEa LTR MaLR 4 378 -1 7 1244 228 345 95 0 chr17 86487824 86487908 -8784743 + PB1D10 SINE Alu 6 97 -20 7 1244 441 310 25 51 chr17 86488415 86488612 -8784039 + B3A SINE B2 1 192 -6 7 1244 220 200 22 0 chr17 86489409 86489454 -8783197 + (CCA)n Simple_repeat Simple_repeat 2 47 0 7 1244 376 290 32 0 chr17 86491774 86491867 -8780784 + B1F1 SINE Alu 2 97 -52 7 1244 264 122 0 0 chr17 86492301 86492342 -8780309 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 1244 255 253 66 44 chr17 86493140 86493231 -8779420 - Charlie22a DNA MER1_type -3 488 396 8 1244 405 0 0 0 chr17 86493350 86493395 -8779256 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 1244 210 268 81 19 chr17 86493980 86494140 -8778511 + (CACAG)n Simple_repeat Simple_repeat 5 174 0 8 1244 1973 160 135 62 chr17 86494576 86495056 -8777595 - RMER19B LTR ERVK -387 515 1 8 1244 24 32 0 0 chr17 86496079 86496110 -8776541 + AT_rich Low_complexity Low_complexity 1 31 0 8 1244 579 316 47 23 chr17 86496239 86496453 -8776198 + B4A SINE B4 15 233 -59 8 1244 448 263 8 8 chr17 86497558 86497677 -8774974 - PB1D7 SINE Alu 0 120 2 8 1244 401 265 78 0 chr17 86499705 86499807 -8772844 + PB1D10 SINE Alu 8 117 0 8 1244 23 33 0 0 chr17 86500591 86500621 -8772030 + AT_rich Low_complexity Low_complexity 1 30 0 1 1244 314 255 167 21 chr17 86501238 86501382 -8771269 + L1MEg LINE L1 1287 1451 -4633 2 1244 732 84 16 16 chr17 86501388 86501509 -8771142 + B1_Mur4 SINE Alu 30 150 0 3 1244 258 225 27 27 chr17 86501913 86501986 -8770665 + GA-rich Low_complexity Low_complexity 5 77 0 4 1244 1426 110 40 79 chr17 86503508 86503785 -8768866 + MT2C_Mm LTR ERVL 210 475 0 5 1244 2907 149 60 16 chr17 86503785 86504329 -8768322 + MTC-int LTR MaLR 431 998 -260 6 1244 8229 149 65 11 chr17 86504331 86505849 -8766802 + ERVL-B4-int LTR ERVL 3912 5629 -132 7 1244 261 233 13 40 chr17 86505849 86505925 -8766726 + ORR1A3-int LTR MaLR 567 640 -1323 8 1244 259 132 0 0 chr17 86505925 86505963 -8766688 + MERVL-int LTR ERVL 5448 5485 0 9 1244 3094 113 12 41 chr17 86505963 86506452 -8766199 + MT2C_Mm LTR ERVL 1 475 0 9 1244 339 338 59 13 chr17 86507241 86507394 -8765257 + B4A SINE B4 16 175 -117 1 155 273 301 12 0 chr17 86507454 86507537 -8765114 + (CA)n Simple_repeat Simple_repeat 1 84 0 1 1245 444 222 0 0 chr17 86508902 86509010 -8763641 + CT-rich Low_complexity Low_complexity 1 108 0 1 1245 280 243 31 60 chr17 86509312 86509412 -8763239 + MLT1A0 LTR MaLR 253 376 -14 1 1245 501 62 0 0 chr17 86510002 86510067 -8762584 + (GGGGA)n Simple_repeat Simple_repeat 5 69 0 1 1245 296 320 139 16 chr17 86510524 86510775 -8761876 + ORR1E LTR MaLR 56 337 -22 1 1245 409 240 103 8 chr17 86510826 86510952 -8761699 + ID_B1 SINE B4 87 224 0 1 1245 1431 83 16 5 chr17 86511922 86512115 -8760536 + B2_Mm2 SINE B2 1 195 0 1 1245 277 337 68 53 chr17 86512180 86512387 -8760264 - Charlie8 DNA MER1_type -1911 517 308 1 1245 364 261 59 79 chr17 86512976 86513229 -8759422 + L1M2 LINE L1 2688 2969 -3174 1 1245 1579 266 181 15 chr17 86513241 86513902 -8758749 + Lx8 LINE L1 6702 7472 -1 2 1245 24 0 0 0 chr17 86513908 86513932 -8758719 + AT_rich Low_complexity Low_complexity 1 24 0 2 1245 862 260 12 42 chr17 86514831 86515067 -8757584 + B4A SINE B4 1 229 -63 2 1245 642 226 14 7 chr17 86515067 86515205 -8757446 + B3A SINE B2 1 139 -59 2 1245 297 276 83 1 chr17 86515236 86515388 -8757263 + L1M2 LINE L1 3840 3995 -2145 1 1245 3873 166 47 3 chr17 86515756 86516458 -8756193 + RMER13B LTR ERVK 1 733 -175 2 1245 537 16 0 0 chr17 86516819 86516881 -8755770 + (TC)n Simple_repeat Simple_repeat 1 62 0 2 1245 252 77 0 0 chr17 86516881 86516920 -8755731 + (CAGA)n Simple_repeat Simple_repeat 4 42 0 2 1245 827 212 10 42 chr17 86517310 86517467 -8755184 + B3 SINE B2 28 185 -31 2 1245 2244 89 37 22 chr17 86517467 86517789 -8754862 - ORR1A2 LTR MaLR 0 327 1 2 1245 827 212 10 42 chr17 86517789 86517823 -8754828 + B3 SINE B2 186 213 -3 2 1245 219 318 94 0 chr17 86517858 86517943 -8754708 + L2c LINE L2 3294 3386 -1 2 1245 590 219 0 17 chr17 86518288 86518460 -8754191 + A-rich Low_complexity Low_complexity 1 169 0 3 1245 318 319 59 21 chr17 86518614 86518800 -8753851 + L1M4c LINE L1 1677 1869 -4515 3 1245 440 209 144 9 chr17 86519516 86519627 -8753024 + B1_Mus2 SINE Alu 20 145 -2 3 1245 226 319 123 25 chr17 86519781 86519903 -8752748 + Charlie15a DNA MER1_type 88 221 -3 3 1245 340 291 127 7 chr17 86520303 86520445 -8752206 + MIRb SINE MIR 36 194 -74 3 1245 542 248 226 0 chr17 86522219 86522488 -8750163 + ORR1D2 LTR MaLR 1 330 -40 3 1245 925 256 137 19 chr17 86522722 86523036 -8749615 + Lx8 LINE L1 6797 7147 -326 3 1245 3264 39 31 0 chr17 86523130 86523514 -8749137 + MTA_Mm LTR MaLR 1 396 0 3 1245 329 286 71 0 chr17 86524468 86524594 -8748057 + L1MA9 LINE L1 6064 6198 -114 3 1245 333 256 136 37 chr17 86525020 86525182 -8747469 + L1M5 LINE L1 5017 5194 -952 3 1245 1048 106 0 12 chr17 86525897 86526069 -8746582 + (TTC)n Simple_repeat Simple_repeat 1 170 0 4 1245 547 270 69 16 chr17 86526463 86526651 -8746000 - MER2 DNA MER2_type -58 287 90 4 1245 191 320 0 0 chr17 86526725 86526800 -8745851 + L2 LINE L2 2323 2397 -1022 4 1245 253 295 174 0 chr17 86527286 86527435 -8745216 - L1MC4 LINE L1 -141 7901 7727 4 1245 306 380 109 15 chr17 86527505 86527844 -8744807 - L1MC4 LINE L1 -433 7609 7239 4 1245 484 248 161 24 chr17 86527857 86528068 -8744583 - L1MC4 LINE L1 -965 7077 6838 4 1245 270 284 33 22 chr17 86528136 86528226 -8744425 + L1MC4 LINE L1 6756 6846 -1196 4 1245 689 222 15 0 chr17 86528485 86528620 -8744031 + MTE2a LTR MaLR 240 376 -3 4 1245 1211 49 0 0 chr17 86528784 86528928 -8743723 + B1_Mus1 SINE Alu 5 148 0 4 1245 446 204 0 0 chr17 86529649 86529740 -8742911 + B1F SINE Alu 16 106 -14 4 1245 1159 61 0 13 chr17 86530730 86530879 -8741772 + B1_Mus2 SINE Alu 1 147 0 4 1245 283 286 13 0 chr17 86531025 86531102 -8741549 + ID4_ SINE ID 2 79 -4 4 1245 189 333 0 0 chr17 86531271 86531346 -8741305 + MER5A DNA MER1_type 21 95 -94 5 1245 1632 37 0 0 chr17 86531662 86531849 -8740802 + B2_Mm1t SINE B2 2 188 -5 5 1245 23 54 0 0 chr17 86532608 86532645 -8740006 + AT_rich Low_complexity Low_complexity 1 37 0 5 1245 348 24 0 0 chr17 86533664 86533705 -8738946 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1245 2250 138 101 54 chr17 86534161 86534606 -8738045 - RMER4A LTR ERVK 0 466 1 5 1245 1055 276 111 23 chr17 86535920 86536442 -8736209 + L1MD2 LINE L1 5792 6359 0 5 1245 644 242 79 25 chr17 86536498 86536701 -8735950 + ID_B1 SINE B4 4 217 -7 5 1245 757 191 7 28 chr17 86536876 86537021 -8735630 - B1F1 SINE Alu 0 149 8 5 1245 338 284 60 120 chr17 86536887 86537071 -8735580 - B4A SINE B4 -72 220 48 5 1245 331 326 148 13 chr17 86537364 86537681 -8734970 + MamRep605 Unknown Unknown 85 444 -432 5 1245 235 284 116 0 chr17 86537732 86537827 -8734824 + MamRep605 Unknown Unknown 442 547 -329 5 1245 303 269 57 9 chr17 86537964 86538069 -8734582 + MIR SINE MIR 43 152 -110 6 1245 190 214 22 33 chr17 86539615 86539707 -8732944 + GA-rich Low_complexity Low_complexity 1 91 0 6 1245 190 256 71 24 chr17 86539883 86539967 -8732684 + L2 LINE L2 2170 2257 -1162 6 1245 382 288 181 34 chr17 86540206 86540504 -8732147 + L2 LINE L2 2730 3071 -348 6 1245 488 307 79 6 chr17 86541062 86541239 -8731412 + MER20 DNA MER1_type 7 196 -23 6 1245 790 134 16 0 chr17 86541265 86541392 -8731259 + B3 SINE B2 1 129 -87 6 1245 446 194 11 21 chr17 86542776 86542871 -8729780 + PB1D9 SINE Alu 12 105 -15 6 1245 1079 120 32 16 chr17 86543496 86543682 -8728969 - URR1A DNA MER1_type -1 225 37 6 1245 243 0 0 0 chr17 86544196 86544223 -8728428 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1245 233 130 0 42 chr17 86544572 86544620 -8728031 + (CGGGG)n Simple_repeat Simple_repeat 5 50 0 6 1245 469 0 33 0 chr17 86544638 86544699 -8727952 + (CGGGGG)n Simple_repeat Simple_repeat 3 65 0 6 1245 222 245 87 58 chr17 86545445 86545549 -8727102 + RSINE1 SINE B4 17 123 -42 7 1245 322 221 267 0 chr17 86546031 86546117 -8726534 + ID_B1 SINE B4 103 211 -13 7 1245 447 259 154 7 chr17 86546149 86546285 -8726366 + RSINE1 SINE B4 4 159 -6 7 1245 3172 116 21 61 chr17 86546293 86546863 -8725788 - MT2B2 LTR ERVL 0 584 38 7 1245 917 306 150 23 chr17 86546967 86547492 -8725159 + MLT2B3 LTR ERVL 119 702 -15 7 1245 989 229 183 19 chr17 86547651 86548061 -8724590 - RLTR11A2 LTR ERVK -44 483 7 7 1245 1666 149 39 87 chr17 86549027 86549408 -8723243 - ORR1B1 LTR MaLR -8 386 24 7 1245 1211 28 0 0 chr17 86549538 86549679 -8722972 + B1_Mus2 SINE Alu 1 141 -6 7 1245 228 303 11 11 chr17 86550048 86550138 -8722513 - Kanga1c DNA Tc2 -638 91 2 7 1245 1428 124 37 0 chr17 86550980 86551197 -8721454 + URR1B DNA MER1_type 1 225 0 7 1245 1265 144 69 0 chr17 86551254 86551456 -8721195 + B3 SINE B2 1 216 0 8 1245 279 183 31 31 chr17 86551637 86551733 -8720918 + CT-rich Low_complexity Low_complexity 1 96 0 8 1245 868 159 0 27 chr17 86551756 86551905 -8720746 + B1_Mus1 SINE Alu 3 147 -1 8 1245 635 262 14 14 chr17 86551962 86552105 -8720546 - B1F SINE Alu -2 147 5 8 1245 377 277 50 14 chr17 86552271 86552410 -8720241 + MLT1E1 LTR MaLR 511 654 0 8 1245 917 181 11 16 chr17 86552503 86552694 -8719957 + ORR1D1 LTR MaLR 41 230 -144 8 1245 226 171 0 0 chr17 86552687 86552728 -8719923 + ORR1D1 LTR MaLR 332 372 -2 8 1245 227 290 29 48 chr17 86553367 86553472 -8719179 - MIRc SINE MIR -131 137 35 8 1245 1020 127 121 0 chr17 86553887 86554060 -8718591 + B2_Mm2 SINE B2 2 195 0 8 1245 23 0 0 0 chr17 86554060 86554083 -8718568 + AT_rich Low_complexity Low_complexity 1 23 0 8 1245 1083 201 47 0 chr17 86554796 86555010 -8717641 - URR1A DNA MER1_type 0 226 3 8 1245 223 108 0 0 chr17 86555301 86555338 -8717313 - RSINE1 SINE B4 -57 108 72 9 1245 457 248 10 0 chr17 86555549 86555650 -8717001 - RSINE1 SINE B4 -61 104 3 9 1245 248 288 167 0 chr17 86555661 86555793 -8716858 + L1M5 LINE L1 2689 2842 -3304 9 1245 324 161 0 0 chr17 86555814 86555895 -8716756 + CT-rich Low_complexity Low_complexity 2 82 0 9 1245 249 222 0 27 chr17 86555895 86555969 -8716682 + L1MD LINE L1 2873 2944 -3202 9 1245 324 255 19 80 chr17 86556098 86556260 -8716391 + L1MD LINE L1 3718 3869 -2277 9 1245 239 333 18 44 chr17 86556848 86556961 -8715690 - L2c LINE L2 0 3387 3278 9 1245 390 21 0 0 chr17 86557072 86557119 -8715532 + (TG)n Simple_repeat Simple_repeat 1 47 0 9 1245 331 277 87 19 chr17 86557955 86558058 -8714593 + RSINE1 SINE B4 20 129 -36 9 1245 756 143 0 0 chr17 86559054 86559180 -8713471 + (TTCC)n Simple_repeat Simple_repeat 1 126 0 9 1245 561 68 0 0 chr17 86559184 86559258 -8713393 + (TTC)n Simple_repeat Simple_repeat 1 74 0 9 1245 614 180 20 49 chr17 86559258 86559462 -8713189 - RMER17C LTR ERVK -139 271 74 1 1245 3039 64 35 23 chr17 86559462 86559861 -8712790 - MTB_Mm LTR MaLR -3 404 1 1 1245 468 0 0 0 chr17 86560563 86560615 -8712036 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1245 378 0 0 0 chr17 86560653 86560695 -8711956 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1245 180 0 0 0 chr17 86561018 86561038 -8711613 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 1245 453 246 7 48 chr17 86562202 86562347 -8710304 + B1_Mur1 SINE Alu 2 140 -9 1 1245 212 122 24 0 chr17 86562372 86562413 -8710238 + (AGGGGG)n Simple_repeat Simple_repeat 6 47 0 1 1245 858 174 0 7 chr17 86564284 86564423 -8708228 + B1_Mur2 SINE Alu 4 141 -8 1 1245 243 0 0 0 chr17 86564428 86564455 -8708196 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 1245 747 33 0 0 chr17 86564455 86564544 -8708107 + (GA)n Simple_repeat Simple_repeat 1 90 0 1 1245 266 319 58 8 chr17 86564998 86565118 -8707533 - MER96B DNA hAT 0 417 292 1 1245 25 83 0 0 chr17 86565137 86565197 -8707454 + AT_rich Low_complexity Low_complexity 1 60 0 1 1245 198 0 0 0 chr17 86565258 86565280 -8707371 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 1 1245 387 0 0 0 chr17 86565576 86565619 -8707032 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1245 30 27 0 0 chr17 86565899 86565936 -8706715 + GC_rich Low_complexity Low_complexity 1 37 0 1 1245 444 19 0 0 chr17 86566885 86566938 -8705713 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1245 296 177 20 50 chr17 86567010 86567111 -8705540 + (CGGG)n Simple_repeat Simple_repeat 4 101 0 1 1245 292 264 20 20 chr17 86570019 86570130 -8702521 - MIRm SINE MIR -43 165 50 1 1245 242 312 62 0 chr17 86570221 86570317 -8702334 - MIRc SINE MIR -12 256 155 1 1245 333 245 0 0 chr17 86570815 86570917 -8701734 + (TA)n Simple_repeat Simple_repeat 2 103 0 1 1245 441 50 0 0 chr17 86570931 86570991 -8701660 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 1245 440 296 63 7 chr17 86571988 86572131 -8700520 - RSINE1 SINE B4 -12 153 3 1 1245 291 240 66 13 chr17 86572131 86572203 -8700448 - B4A SINE B4 -62 230 155 1 1245 203 61 30 0 chr17 86572281 86572314 -8700337 + (TATG)n Simple_repeat Simple_repeat 2 35 0 1 1245 799 135 37 8 chr17 86572326 86572460 -8700191 - B1_Mus2 SINE Alu 0 147 10 1 1245 443 247 36 102 chr17 86572344 86572511 -8700140 - MT2B LTR ERVL -318 283 128 1 1245 1414 201 159 20 chr17 86572553 86572904 -8699747 - MTD LTR MaLR -14 405 6 1 1245 479 335 38 24 chr17 86572926 86573137 -8699514 + MIR SINE MIR 33 246 -16 1 1245 747 150 0 0 chr17 86573624 86573764 -8698887 + (CA)n Simple_repeat Simple_repeat 1 140 0 1 1245 181 293 35 0 chr17 86573882 86573940 -8698711 + MIRm SINE MIR 94 153 -123 1 1245 634 246 117 45 chr17 86574208 86574472 -8698179 - Lx8 LINE L1 -6 7467 7185 1 1245 268 343 143 60 chr17 86574624 86575043 -8697608 + L2a LINE L2 2293 2746 -673 1 1245 186 397 0 0 chr17 86575254 86575322 -8697329 + L2a LINE L2 3122 3189 -237 1 1245 320 287 93 0 chr17 86575351 86575459 -8697192 - PB1D7 SINE Alu -2 118 1 1 1245 1094 270 158 44 chr17 86575794 86576390 -8696261 - Lx8 LINE L1 -1 7472 6809 1 1245 197 319 31 71 chr17 86577755 86577853 -8694798 - L2c LINE L2 -1 3386 3293 1 1245 1116 234 53 25 chr17 86578638 86578919 -8693732 + B4A SINE B4 2 290 -2 1 1245 279 0 0 0 chr17 86579035 86579066 -8693585 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1245 453 218 0 0 chr17 86579410 86579488 -8693163 + ID4_ SINE ID 2 79 -4 1 1245 216 97 0 0 chr17 86579594 86579625 -8693026 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1245 349 299 33 0 chr17 86580293 86580398 -8692253 + PB1D7 SINE Alu 5 114 -6 1 1245 232 326 76 49 chr17 86580759 86580943 -8691708 + MIRb SINE MIR 27 215 -53 1 1245 1078 268 46 36 chr17 86581103 86581409 -8691242 + MTEa LTR MaLR 55 363 -16 1 1245 512 212 39 78 chr17 86581473 86581652 -8690999 + MER53 DNA hAT 9 180 -13 1 1245 1045 248 177 28 chr17 86581884 86581935 -8690716 - MTEa LTR MaLR 0 379 333 1 1245 880 244 89 122 chr17 86581935 86582327 -8690324 - MTE2a LTR MaLR 0 379 1 1 1245 1045 248 177 28 chr17 86582327 86582602 -8690049 - MTEa LTR MaLR -47 332 4 1 1245 294 29 0 0 chr17 86582901 86582936 -8689715 + (TTCC)n Simple_repeat Simple_repeat 4 38 0 1 1245 1028 135 0 17 chr17 86582941 86583122 -8689529 + CT-rich Low_complexity Low_complexity 1 178 0 1 1245 339 234 13 0 chr17 86583701 86583778 -8688873 - ID4 SINE ID -4 79 2 1 1245 385 311 75 75 chr17 86583969 86584223 -8688428 + MIR SINE MIR 7 260 -2 1 1245 198 342 40 71 chr17 86584518 86584644 -8688007 + MIRc SINE MIR 64 185 -83 1 1245 498 17 0 0 chr17 86584822 86584881 -8687770 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 1 1245 405 0 0 0 chr17 86585520 86585565 -8687086 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1245 576 42 0 0 chr17 86585716 86585787 -8686864 + (TC)n Simple_repeat Simple_repeat 2 72 0 1 1245 684 360 62 14 chr17 86586069 86586345 -8686306 - B4A SINE B4 0 292 4 1 1245 2027 162 50 32 chr17 86587076 86587453 -8685198 - ORR1C2 LTR MaLR 0 384 1 1 1245 1255 242 113 67 chr17 86587971 86588332 -8684319 - RLTR20B3 LTR ERVK -56 521 133 1 1245 3516 18 5 0 chr17 86588332 86588722 -8683929 + MTA_Mm LTR MaLR 3 394 -2 1 1245 1255 242 113 67 chr17 86588722 86588839 -8683812 - RLTR20B3 LTR ERVK -445 132 21 1 1245 517 108 30 37 chr17 86588921 86589056 -8683595 + (TCCA)n Simple_repeat Simple_repeat 1 134 0 1 1245 649 225 93 0 chr17 86589397 86589526 -8683125 - B1_Mur2 SINE Alu -6 143 3 1 1245 184 293 33 33 chr17 86589834 86589894 -8682757 + L2 LINE L2 111 170 -3249 1 1245 456 51 0 0 chr17 86589959 86590018 -8682633 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 1 1245 935 90 90 0 chr17 86590115 86590249 -8682402 - B1_Mus1 SINE Alu -1 147 2 1 1245 848 195 0 26 chr17 86590276 86590429 -8682222 + B1_Mur1 SINE Alu 1 149 0 1 1245 808 192 80 20 chr17 86590916 86591109 -8681542 - B3 SINE B2 -1 197 1 1 1245 508 102 34 0 chr17 86591597 86591685 -8680966 + (TCCC)n Simple_repeat Simple_repeat 1 91 0 1 1245 215 152 0 21 chr17 86591731 86591778 -8680873 + CT-rich Low_complexity Low_complexity 1 46 0 1 1245 1367 282 68 35 chr17 86591857 86592401 -8680250 - Lx9 LINE L1 -185 7459 6898 1 1245 823 268 41 74 chr17 86592632 86592924 -8679727 - B4A SINE B4 0 292 24 1 1245 230 81 27 0 chr17 86594223 86594260 -8678391 + (CAAT)n Simple_repeat Simple_repeat 2 39 0 1 1245 1015 247 33 58 chr17 86594455 86594730 -8677921 - B4A SINE B4 -23 269 2 1 1245 489 274 15 23 chr17 86595619 86595750 -8676901 + ID_B1 SINE B4 87 216 -8 1 1245 228 221 80 93 chr17 86596294 86596369 -8676282 - ID4_ SINE ID -9 74 1 1 1245 333 118 0 0 chr17 86597073 86597124 -8675527 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 1 1245 396 103 0 0 chr17 86597172 86597230 -8675421 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1245 725 41 10 0 chr17 86597347 86597444 -8675207 + (CA)n Simple_repeat Simple_repeat 2 99 0 1 1245 222 278 130 0 chr17 86598908 86598962 -8673689 - L2b LINE L2 -6 3369 3309 1 1245 960 154 0 0 chr17 86600065 86600240 -8672411 + (TCCA)n Simple_repeat Simple_repeat 4 178 0 1 1245 363 291 0 0 chr17 86600259 86600338 -8672313 - ID4_ SINE ID -3 80 2 1 1245 579 112 0 0 chr17 86600794 86600883 -8671768 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 1 1245 4084 11 0 0 chr17 86601783 86602232 -8670419 - L1Md_A LINE L1 0 6582 6134 1 1245 189 0 0 0 chr17 86602531 86602552 -8670099 + (AGCTG)n Simple_repeat Simple_repeat 4 24 0 1 1245 484 292 0 0 chr17 86602808 86602928 -8669723 + PB1D7 SINE Alu 1 120 0 1 1245 212 327 18 0 chr17 86602957 86603012 -8669639 + ID4_ SINE ID 3 58 -25 1 1245 772 289 31 4 chr17 86603941 86604170 -8668481 - B4A SINE B4 -17 275 41 1 1245 261 288 86 72 chr17 86604201 86604422 -8668229 + ID_B1 SINE B4 1 224 0 1 1245 184 200 38 57 chr17 86604513 86604566 -8668085 - MIR SINE MIR -205 57 6 1 1245 195 184 0 0 chr17 86604974 86605012 -8667639 + GA-rich Low_complexity Low_complexity 1 38 0 1 1245 225 139 0 0 chr17 86606825 86606861 -8665790 - RMER19C LTR ERVK -575 36 1 1 1245 897 109 14 7 chr17 86606869 86607007 -8665644 - MurERV4_19-int LTR ERVK -3489 2291 2153 1 1245 338 262 0 12 chr17 86607036 86607121 -8665530 + (CATA)n Simple_repeat Simple_repeat 2 85 0 1 1245 552 217 0 0 chr17 86607122 86607260 -8665391 + (TA)n Simple_repeat Simple_repeat 2 139 0 1 1245 356 373 9 0 chr17 86607278 86607388 -8665263 - ID_B1 SINE B4 -32 192 82 1 1245 220 256 0 0 chr17 86608187 86608230 -8664421 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1245 792 192 209 0 chr17 86608292 86608464 -8664187 + B3 SINE B2 3 210 -6 1 1245 693 281 18 24 chr17 86609751 86609915 -8662736 + RSINE1 SINE B4 3 165 0 1 1245 192 125 0 0 chr17 86609921 86609953 -8662698 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1245 253 250 71 29 chr17 86610093 86610104 -8662547 + B4 SINE B4 6 75 -214 1 1245 316 196 36 0 chr17 86610104 86610160 -8662491 + ID4_ SINE ID 17 74 -9 1 1245 558 203 127 51 chr17 86610538 86610735 -8661916 - MLT1C LTR MaLR -228 239 28 1 1245 216 0 0 0 chr17 86611288 86611312 -8661339 + (TC)n Simple_repeat Simple_repeat 2 25 0 1 1245 420 20 0 0 chr17 86611312 86611360 -8661291 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1245 190 342 127 34 chr17 86611450 86611804 -8660847 - L2 LINE L2 -882 2537 2151 2 1245 811 272 53 65 chr17 86612528 86612997 -8659654 + Lx8 LINE L1 6959 7401 -72 2 1245 414 0 0 0 chr17 86613001 86613047 -8659604 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1245 662 133 0 9 chr17 86613507 86613621 -8659030 + (TCTCCC)n Simple_repeat Simple_repeat 6 118 0 2 1245 189 107 0 0 chr17 86614766 86614794 -8657857 + (TC)n Simple_repeat Simple_repeat 1 28 0 2 1245 739 302 41 41 chr17 86614795 86615064 -8657587 - B4 SINE B4 -23 269 1 2 1245 23 0 0 0 chr17 86615505 86615528 -8657123 + AT_rich Low_complexity Low_complexity 1 23 0 2 1245 629 174 157 29 chr17 86615667 86615842 -8656809 + URR1A DNA MER1_type 4 226 0 2 1245 375 280 170 24 chr17 86616287 86616499 -8656152 - L1MC4 LINE L1 -4849 1366 1124 2 1245 965 34 0 0 chr17 86616500 86616617 -8656034 - B1_Mus1 SINE Alu -1 147 31 2 1245 651 149 0 29 chr17 86616619 86616757 -8655894 + CT-rich Low_complexity Low_complexity 3 136 0 2 1245 245 173 8 119 chr17 86617099 86617217 -8655434 + Lx9 LINE L1 7540 7644 0 2 1245 217 297 0 30 chr17 86617534 86617600 -8655051 + G-rich Low_complexity Low_complexity 2 65 0 2 1245 534 207 139 8 chr17 86618237 86618359 -8654292 - B1F SINE Alu -5 144 7 2 1245 2684 135 170 8 chr17 86618804 86619297 -8653354 - RMER15 LTR ERVL -2 573 1 2 1245 815 238 0 35 chr17 86619646 86619816 -8652835 + B3 SINE B2 2 165 -51 2 1245 441 66 0 0 chr17 86619818 86619879 -8652772 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 1245 414 272 8 34 chr17 86620066 86620184 -8652467 + PB1D10 SINE Alu 1 115 -2 2 1245 216 326 116 0 chr17 86620329 86620458 -8652193 - L2b LINE L2 -187 3188 3045 2 1245 357 227 22 22 chr17 86620560 86620650 -8652001 - B1_Mur1 SINE Alu -2 147 58 2 1245 295 325 68 49 chr17 86620779 86620941 -8651710 + MLT1C LTR MaLR 303 467 0 2 1245 477 0 0 0 chr17 86621146 86621199 -8651452 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1245 657 374 49 28 chr17 86621303 86621589 -8651062 + B4A SINE B4 1 292 0 2 1245 1146 135 0 2 chr17 86623051 86623477 -8649174 + (TCCA)n Simple_repeat Simple_repeat 1 424 0 2 1245 537 16 0 0 chr17 86623673 86623735 -8648916 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 1245 687 276 14 51 chr17 86623736 86623950 -8648701 - B4 SINE B4 -67 225 20 2 1245 244 292 83 0 chr17 86623993 86624065 -8648586 - ID_B1 SINE B4 -70 154 81 2 1245 200 162 54 0 chr17 86624159 86624196 -8648455 + CT-rich Low_complexity Low_complexity 2 40 0 2 1245 429 255 29 29 chr17 86624198 86624303 -8648348 - ID_B1 SINE B4 0 224 120 2 1245 468 191 181 0 chr17 86626588 86626682 -8645969 + URR1A DNA MER1_type 2 112 -114 2 1245 286 296 79 55 chr17 86627476 86627646 -8645005 - MIRc SINE MIR -61 207 19 2 1245 419 191 0 28 chr17 86628909 86629017 -8643634 + C-rich Low_complexity Low_complexity 3 107 0 2 1245 772 274 116 86 chr17 86629977 86630169 -8642482 + B4A SINE B4 6 220 -72 2 1245 1030 215 33 14 chr17 86630169 86630381 -8642270 + B3 SINE B2 1 216 0 2 1245 772 274 116 86 chr17 86630381 86630456 -8642195 + B4A SINE B4 221 281 -11 2 1245 302 383 0 6 chr17 86630470 86630638 -8642013 + (CATATA)n Simple_repeat Simple_repeat 6 172 0 2 1245 416 322 52 61 chr17 86630782 86630994 -8641657 - MIR SINE MIR -39 223 14 2 1245 332 309 82 95 chr17 86631598 86631830 -8640821 + MIR SINE MIR 10 238 -30 2 1245 580 308 40 10 chr17 86631851 86632051 -8640600 + MIR SINE MIR 12 217 -45 2 1245 234 0 0 0 chr17 86632168 86632194 -8640457 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 1245 720 35 0 0 chr17 86632428 86632515 -8640136 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 2 1245 955 251 94 12 chr17 86632515 86632564 -8640087 - B4A SINE B4 -11 281 235 2 1245 1411 191 78 36 chr17 86632564 86632706 -8639945 - ORR1D1 LTR MaLR 0 374 230 2 1245 531 0 0 0 chr17 86632706 86632765 -8639886 + (CAGG)n Simple_repeat Simple_repeat 3 61 0 2 1245 1411 191 78 36 chr17 86632765 86632980 -8639671 - ORR1D1 LTR MaLR -145 229 2 2 1245 955 251 94 12 chr17 86632980 86633184 -8639467 - B4A SINE B4 -58 234 7 2 1245 192 175 0 24 chr17 86633527 86633568 -8639083 + L2c LINE L2 3296 3335 -52 2 1245 235 228 254 0 chr17 86634730 86634844 -8637807 - L2b LINE L2 -217 3158 3016 2 1245 368 256 79 8 chr17 86637286 86637412 -8635239 - MER20 DNA MER1_type -14 205 71 2 1245 252 295 110 48 chr17 86637728 86637874 -8634777 + MER103 DNA DNA 11 165 -1 2 1245 228 313 40 0 chr17 86638103 86638202 -8634449 - MamRep605 Unknown Unknown -729 147 45 2 1246 237 312 16 0 chr17 86639058 86639122 -8633529 - ID4 SINE ID -17 66 2 2 1246 306 115 0 0 chr17 86639434 86639486 -8633165 + (GCCTG)n Simple_repeat Simple_repeat 1 52 0 2 1246 275 200 117 43 chr17 86639488 86639582 -8633069 - MIRb SINE MIR -122 146 46 2 1246 778 267 112 102 chr17 86639884 86640364 -8632287 - Charlie1b DNA MER1_type -4 519 35 2 1246 273 364 11 0 chr17 86641368 86641456 -8631195 + MIR SINE MIR 42 130 -78 2 1246 21 0 0 0 chr17 86643835 86643856 -8628795 + AT_rich Low_complexity Low_complexity 1 21 0 2 1246 730 304 20 78 chr17 86644209 86644277 -8628374 - B4A SINE B4 -15 277 224 2 1246 1294 17 29 0 chr17 86644277 86644450 -8628201 + (TATG)n Simple_repeat Simple_repeat 2 179 0 2 1246 730 304 20 78 chr17 86644450 86644674 -8627977 - B4A SINE B4 -69 223 2 2 1246 1152 120 0 12 chr17 86644888 86645057 -8627594 + B2_Mm2 SINE B2 5 171 -24 2 1246 519 284 129 82 chr17 86647391 86647747 -8624904 + LTR16A LTR ERVL 24 396 -55 2 1246 3645 15 0 0 chr17 86647748 86648144 -8624507 - MTA_Mm LTR MaLR 0 396 1 2 1246 308 301 84 52 chr17 86648620 86648774 -8623877 - MIRb SINE MIR -103 165 7 2 1246 376 317 116 50 chr17 86651246 86651505 -8621146 - MLT1K LTR MaLR -57 538 263 2 1246 313 275 116 29 chr17 86652036 86652208 -8620443 + L1ME1 LINE L1 5970 6156 -23 2 1246 301 274 43 32 chr17 86654193 86654378 -8618273 + L1MA9 LINE L1 5138 5324 -816 2 1246 1238 203 14 0 chr17 86654383 86654595 -8618056 + B3 SINE B2 2 216 0 2 1246 472 116 11 11 chr17 86654785 86654872 -8617779 + (TAGA)n Simple_repeat Simple_repeat 3 89 0 2 1246 1595 306 103 12 chr17 86654872 86655638 -8617013 + L1MA9 LINE L1 5320 6155 -157 2 1246 495 69 0 0 chr17 86655691 86655763 -8616888 + (TG)n Simple_repeat Simple_repeat 2 73 0 2 1246 440 229 36 9 chr17 86655763 86655873 -8616778 - PB1D9 SINE Alu -7 113 1 2 1246 194 364 49 21 chr17 86656807 86656950 -8615701 - MER5A DNA MER1_type 0 189 43 2 1246 857 193 0 0 chr17 86658111 86658256 -8614395 - B3 SINE B2 -71 145 1 2 1246 450 0 0 0 chr17 86658550 86658600 -8614051 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 1246 218 214 0 0 chr17 86658655 86658697 -8613954 + GA-rich Low_complexity Low_complexity 1 42 0 2 1246 414 0 0 0 chr17 86658697 86658743 -8613908 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1246 742 273 35 26 chr17 86658766 86658992 -8613659 - B4A SINE B4 -63 229 2 2 1246 336 191 44 0 chr17 86659033 86659101 -8613550 - L1M4 LINE L1 -749 5397 5327 2 1246 436 222 211 9 chr17 86659113 86659222 -8613429 + RSINE1 SINE B4 11 141 -24 2 1246 252 0 0 0 chr17 86659225 86659253 -8613398 + (TC)n Simple_repeat Simple_repeat 1 28 0 2 1246 459 0 0 0 chr17 86659253 86659303 -8613348 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 1246 227 242 68 39 chr17 86659321 86659424 -8613227 - L1M4 LINE L1 -813 5327 5222 2 1246 357 312 75 34 chr17 86659585 86659731 -8612920 - MIRb SINE MIR -86 182 31 2 1246 1992 120 6 74 chr17 86659752 86660104 -8612547 - ORR1A4 LTR MaLR -1 328 1 2 1246 654 13 0 0 chr17 86660243 86660318 -8612333 + (TCTCC)n Simple_repeat Simple_repeat 2 76 0 2 1246 309 299 45 52 chr17 86661176 86661331 -8611320 - L1MB5 LINE L1 -75 6109 5956 2 1246 211 256 200 25 chr17 86661549 86661669 -8610982 + MIR SINE MIR 84 224 -38 2 1246 231 157 0 0 chr17 86662124 86662175 -8610476 + CT-rich Low_complexity Low_complexity 1 51 0 2 1246 194 310 69 0 chr17 86662934 86662992 -8609659 - MIRm SINE MIR -123 153 92 2 1246 21 0 0 0 chr17 86663277 86663298 -8609353 + AT_rich Low_complexity Low_complexity 1 21 0 2 1246 321 220 75 32 chr17 86663839 86663933 -8608718 - MER5A DNA MER1_type -27 162 65 2 1246 767 260 78 0 chr17 86664319 86664511 -8608140 - B3 SINE B2 0 216 10 2 1246 308 253 0 26 chr17 86667146 86667270 -8605381 + L1ME1 LINE L1 5553 5672 -511 2 1246 519 255 146 58 chr17 86667392 86667721 -8604930 + L1ME1 LINE L1 5688 6045 -134 2 1246 417 345 7 7 chr17 86667903 86668043 -8604608 - MER2 DNA MER2_type 0 345 206 2 1246 271 336 27 0 chr17 86668097 86668207 -8604444 + ORR1D1 LTR MaLR 262 374 0 2 1246 248 243 86 0 chr17 86668726 86668796 -8603855 + MIRc SINE MIR 104 179 -89 2 1246 292 381 15 0 chr17 86668852 86668986 -8603665 + L2a LINE L2 3064 3199 -227 2 1246 499 316 30 91 chr17 86669515 86669847 -8602804 - MLT1A1 LTR MaLR 0 408 52 2 1246 306 332 127 65 chr17 86669917 86670234 -8602417 - L1MB7 LINE L1 -14 6170 5842 2 1246 342 0 0 0 chr17 86670234 86670272 -8602379 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1246 306 332 127 65 chr17 86670272 86670418 -8602233 - L1MB7 LINE L1 -343 5841 5678 2 1246 345 186 0 0 chr17 86672949 86673019 -8599632 + GA-rich Low_complexity Low_complexity 3 72 0 2 1246 288 111 0 0 chr17 86673677 86673731 -8598920 + (T)n Simple_repeat Simple_repeat 1 54 0 2 1246 535 258 156 98 chr17 86674249 86674496 -8598155 + B4 SINE B4 2 275 -17 2 1246 477 0 0 0 chr17 86674496 86674549 -8598102 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 1246 535 258 156 98 chr17 86674549 86674576 -8598075 + B4 SINE B4 276 292 0 2 1246 230 215 106 53 chr17 86674898 86675011 -8597640 - MLT1I LTR MaLR -2 409 291 3 1246 2485 142 95 14 chr17 86675781 86676267 -8596384 - RLTR11A2 LTR ERVK 0 527 3 3 1246 231 88 0 0 chr17 86676710 86676744 -8595907 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1246 209 170 0 78 chr17 86676992 86677043 -8595608 + CT-rich Low_complexity Low_complexity 3 49 0 3 1246 21 57 0 0 chr17 86678812 86678847 -8593804 + AT_rich Low_complexity Low_complexity 1 35 0 3 1246 428 237 32 0 chr17 86678847 86678940 -8593711 - PB1D10 SINE Alu -21 96 1 3 1246 181 267 12 74 chr17 86679031 86679112 -8593539 + L3 LINE CR1 2358 2433 -2056 3 1246 517 64 26 0 chr17 86679599 86679677 -8592974 + (TC)n Simple_repeat Simple_repeat 1 80 0 3 1246 310 190 35 0 chr17 86680648 86680706 -8591945 - HAL1-3A_ME LINE L1 -823 2035 1976 3 1246 843 181 0 0 chr17 86680715 86680971 -8591680 + (TG)n Simple_repeat Simple_repeat 1 256 0 3 1246 315 0 0 0 chr17 86681421 86681456 -8591195 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 1246 261 0 0 0 chr17 86681569 86681598 -8591053 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1246 1059 155 124 0 chr17 86681925 86682118 -8590533 - URR1A DNA MER1_type -4 222 6 3 1246 448 188 22 28 chr17 86683635 86683816 -8588835 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1246 213 174 30 30 chr17 86683831 86683932 -8588719 + (TG)n Simple_repeat Simple_repeat 2 102 0 3 1246 1148 236 120 68 chr17 86685198 86685507 -8587144 - MTD LTR MaLR -89 330 6 3 1246 632 167 6 0 chr17 86686970 86687138 -8585513 + CT-rich Low_complexity Low_complexity 1 169 0 3 1246 204 40 0 0 chr17 86687138 86687163 -8585488 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1246 487 254 42 26 chr17 86687317 86687457 -8585194 - ID_B1 SINE B4 -2 222 83 3 1246 226 324 181 33 chr17 86687608 86687790 -8584861 + L2 LINE L2 2690 2898 -521 3 1246 31 0 0 0 chr17 86689326 86689357 -8583294 + AT_rich Low_complexity Low_complexity 1 31 0 3 1246 406 165 10 10 chr17 86689455 86689559 -8583092 + (TA)n Simple_repeat Simple_repeat 2 105 0 3 1246 1871 290 84 37 chr17 86689611 86690482 -8582169 - Lx9 LINE L1 -124 7520 6609 3 1246 216 333 0 0 chr17 86693299 86693368 -8579283 - ID4_ SINE ID -13 70 2 3 1246 331 304 48 19 chr17 86693368 86693472 -8579179 - PB1D10 SINE Alu -1 116 10 3 1246 297 333 67 49 chr17 86693528 86694039 -8578612 - L1MC5 LINE L1 -140 7821 7302 3 1246 187 212 18 88 chr17 86694709 86694766 -8577885 + L2 LINE L2 2192 2244 -1175 3 1246 293 0 0 26 chr17 86694770 86694808 -8577843 + (TTA)n Simple_repeat Simple_repeat 2 38 0 3 1246 389 272 18 0 chr17 86695294 86695408 -8577243 + (CATA)n Simple_repeat Simple_repeat 2 117 0 3 1246 670 211 0 14 chr17 86695417 86695714 -8576937 + (CA)n Simple_repeat Simple_repeat 1 292 0 3 1246 999 86 0 0 chr17 86696214 86696353 -8576298 + (TATATG)n Simple_repeat Simple_repeat 3 141 0 3 1246 894 139 0 0 chr17 86696964 86697129 -8575522 + (CA)n Simple_repeat Simple_repeat 2 166 0 3 1246 191 116 0 44 chr17 86697400 86697445 -8575206 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 1246 274 326 11 11 chr17 86697761 86697854 -8574797 + PB1D7 SINE Alu 20 112 -8 3 1246 1182 207 113 13 chr17 86698474 86698783 -8573868 + ORR1D1 LTR MaLR 24 363 -11 3 1246 550 176 48 29 chr17 86698794 86698899 -8573752 - PB1D9 SINE Alu -13 107 1 3 1246 221 163 0 0 chr17 86698976 86699019 -8573632 + A-rich Low_complexity Low_complexity 1 43 0 3 1246 230 306 35 0 chr17 86699199 86699284 -8573367 + L1ME2 LINE L1 6073 6160 -4 3 1246 455 182 97 24 chr17 86699302 86699426 -8573225 + MER113 DNA MER1_type 108 240 -281 3 1246 238 173 135 0 chr17 86699528 86699580 -8573071 + B1_Mus2 SINE Alu 1 59 -88 3 1246 236 287 0 38 chr17 86699580 86699685 -8572966 + GA-rich Low_complexity Low_complexity 5 105 0 3 1246 438 274 37 9 chr17 86699699 86699806 -8572845 + B1_Mur1 SINE Alu 40 149 0 3 1246 210 339 108 0 chr17 86701132 86701197 -8571454 - ID4_ SINE ID -10 73 2 3 1246 219 205 173 35 chr17 86701337 86701425 -8571226 - MIR SINE MIR -98 178 77 3 1246 189 74 0 0 chr17 86702224 86702251 -8570400 + (CGGT)n Simple_repeat Simple_repeat 1 27 0 3 1246 506 109 0 38 chr17 86703716 86703821 -8568830 + (GGA)n Simple_repeat Simple_repeat 3 103 0 3 1246 378 0 0 0 chr17 86704607 86704649 -8568002 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1246 237 163 0 0 chr17 86705213 86705262 -8567389 + CT-rich Low_complexity Low_complexity 1 49 0 3 1246 207 242 90 15 chr17 86706154 86706221 -8566430 - MIR SINE MIR -126 136 65 3 1246 197 255 0 89 chr17 86706809 86706865 -8565786 - MIRb SINE MIR -96 172 122 3 1246 298 366 80 12 chr17 86706976 86707139 -8565512 - Zaphod DNA Tip100 -47 3984 3811 3 1246 374 274 36 60 chr17 86707139 86707306 -8565345 - Zaphod DNA Tip100 -2756 1275 1113 3 1246 321 311 11 0 chr17 86707306 86707396 -8565255 + (TG)n Simple_repeat Simple_repeat 2 92 0 3 1246 969 92 0 0 chr17 86707609 86707751 -8564900 + (TG)n Simple_repeat Simple_repeat 1 142 0 3 1246 428 250 8 89 chr17 86707938 86708061 -8564590 - PB1D7 SINE Alu -1 119 7 3 1246 273 300 9 26 chr17 86708060 86708173 -8564478 - Zaphod DNA Tip100 -2981 1050 940 3 1246 690 235 130 47 chr17 86708181 86708373 -8564278 + B3A SINE B2 2 209 -7 3 1246 380 37 19 0 chr17 86709104 86709158 -8563493 + (TTTTTG)n Simple_repeat Simple_repeat 3 57 0 3 1246 852 240 73 150 chr17 86709313 86709627 -8563024 + B4 SINE B4 1 290 -2 3 1246 433 47 0 30 chr17 86709637 86709703 -8562948 + (CA)n Simple_repeat Simple_repeat 1 64 0 3 1246 508 29 29 0 chr17 86709703 86709772 -8562879 + (GA)n Simple_repeat Simple_repeat 2 73 0 3 1246 226 231 200 0 chr17 86709833 86709898 -8562753 + B3A SINE B2 3 80 -118 3 1246 352 266 48 29 chr17 86710879 86711027 -8561624 + MER104 DNA Tc2 16 174 -7 3 1246 289 268 174 68 chr17 86711803 86711935 -8560716 + RSINE1 SINE B4 18 163 -2 3 1246 197 311 17 102 chr17 86712700 86712818 -8559833 - L4 LINE RTE -1829 200 93 3 1246 343 284 101 29 chr17 86713878 86714016 -8558635 - MIR SINE MIR -38 224 77 3 1246 413 265 102 32 chr17 86714796 86715080 -8557571 - L1MB3 LINE L1 -9 6174 5871 3 1246 229 327 74 56 chr17 86715390 86715552 -8557099 + MIRb SINE MIR 99 263 -5 3 1246 453 19 0 0 chr17 86715640 86715694 -8556957 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 1246 228 35 0 0 chr17 86715946 86715975 -8556676 + (CCA)n Simple_repeat Simple_repeat 1 29 0 3 1246 344 313 10 10 chr17 86716004 86716104 -8556547 + MER5A DNA MER1_type 83 182 -7 3 1246 354 23 0 0 chr17 86716860 86716903 -8555748 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1246 275 290 134 22 chr17 86717186 86717320 -8555331 + MER117 DNA MER1_type 1 149 -48 3 1246 725 267 33 37 chr17 86717568 86717782 -8554869 - B3 SINE B2 -3 213 1 3 1246 452 311 50 50 chr17 86717809 86717968 -8554683 - RSINE1 SINE B4 -1 164 6 3 1246 3774 286 121 32 chr17 86717997 86718714 -8553937 - Lx8 LINE L1 -1 7472 6702 3 1246 180 0 0 0 chr17 86718714 86718734 -8553917 + (GTTTG)n Simple_repeat Simple_repeat 1 20 0 3 1246 3774 286 121 32 chr17 86718734 86719246 -8553405 - Lx8 LINE L1 -772 6701 6199 3 1246 306 0 0 0 chr17 86719246 86719280 -8553371 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 1246 3774 252 85 22 chr17 86719280 86720478 -8552173 - Lx8 LINE L1 -1275 6198 4867 3 1246 354 337 136 32 chr17 86720487 86720797 -8551854 - LTR37A LTR ERV1 0 426 85 3 1246 332 351 26 33 chr17 86720892 86721045 -8551606 - MLT1J LTR MaLR -267 245 94 3 1246 540 0 0 0 chr17 86721300 86721360 -8551291 + (TA)n Simple_repeat Simple_repeat 2 61 0 3 1246 438 326 191 29 chr17 86721878 86722124 -8550527 - B4A SINE B4 -1 291 6 3 1246 213 171 0 24 chr17 86722220 86722262 -8550389 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 3 1246 226 352 23 39 chr17 86722442 86722572 -8550079 + MIRc SINE MIR 130 257 -11 3 1246 317 264 116 65 chr17 86722740 86722955 -8549696 + MIR SINE MIR 8 233 -29 3 1246 291 54 0 0 chr17 86723275 86723312 -8549339 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1246 192 40 0 0 chr17 86723599 86723624 -8549027 + (GGGTG)n Simple_repeat Simple_repeat 2 26 0 3 1246 245 256 131 24 chr17 86723841 86723925 -8548726 - MIR3 SINE MIR -25 183 91 3 1246 459 0 0 0 chr17 86724455 86724506 -8548145 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1246 315 0 0 0 chr17 86724506 86724540 -8548111 + (GA)n Simple_repeat Simple_repeat 2 36 0 3 1246 358 189 10 126 chr17 86725602 86725705 -8546946 - B4A SINE B4 -189 103 13 3 1246 414 222 0 202 chr17 86726686 86726810 -8545841 + B1F SINE Alu 27 141 -8 3 1246 681 101 0 0 chr17 86726810 86726909 -8545742 + (GGAA)n Simple_repeat Simple_repeat 3 101 0 3 1246 488 141 78 3 chr17 86726956 86727046 -8545605 + B4A SINE B4 8 106 -59 3 1246 367 232 12 24 chr17 86727066 86727150 -8545501 + B4A SINE B4 155 237 -55 3 1246 1536 151 68 4 chr17 86727150 86727430 -8545221 - Lx4B LINE L1 -316 6742 6445 3 1246 1049 166 33 33 chr17 86727432 86727633 -8545018 + Lx4B LINE L1 6842 7042 -16 3 1246 234 0 0 0 chr17 86727633 86727659 -8544992 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 3 1246 195 42 0 0 chr17 86727792 86727816 -8544835 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1246 219 69 0 0 chr17 86728794 86728823 -8543828 + (CTCA)n Simple_repeat Simple_repeat 2 30 0 3 1246 211 321 153 14 chr17 86729427 86729576 -8543075 - MIR SINE MIR -87 181 1 3 1246 252 0 0 0 chr17 86729781 86729809 -8542842 + (TC)n Simple_repeat Simple_repeat 1 28 0 3 1246 180 77 0 0 chr17 86729820 86729846 -8542805 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 1246 423 0 0 0 chr17 86729901 86729948 -8542703 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 1246 536 279 71 18 chr17 86731355 86731523 -8541128 + B4A SINE B4 102 278 -14 3 1246 369 0 0 0 chr17 86731547 86731588 -8541063 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1246 354 45 0 0 chr17 86731588 86731631 -8541020 + (TA)n Simple_repeat Simple_repeat 1 44 0 4 1246 445 266 52 77 chr17 86733766 86734012 -8538639 + B4A SINE B4 7 292 0 4 1246 270 0 0 0 chr17 86735079 86735109 -8537542 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 1246 560 221 9 0 chr17 86735174 86735287 -8537364 - RSINE1 SINE B4 -32 133 20 4 1246 350 252 180 8 chr17 86735533 86735661 -8536990 - MTEa LTR MaLR 0 379 230 4 1246 558 276 52 7 chr17 86735704 86735857 -8536794 - MTEa LTR MaLR -218 161 2 4 1246 905 52 46 0 chr17 86736359 86736512 -8536139 + (TG)n Simple_repeat Simple_repeat 2 161 0 4 1246 225 119 0 0 chr17 86737153 86737195 -8535456 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1246 263 366 102 40 chr17 86737503 86737807 -8534844 + L2 LINE L2 2539 2861 -558 4 1246 207 0 0 0 chr17 86739411 86739434 -8533217 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1246 249 259 102 0 chr17 86739674 86739782 -8532869 - L1M5 LINE L1 -385 5739 5621 4 1246 209 57 29 0 chr17 86739789 86739824 -8532827 + (TTTTG)n Simple_repeat Simple_repeat 3 38 0 4 1246 683 170 82 0 chr17 86740225 86740360 -8532291 + URR1A DNA MER1_type 81 226 0 4 1246 312 282 130 31 chr17 86740360 86740387 -8532264 - CYRA11_Mm Unknown Y-chromosome -435 182 140 4 1246 258 205 71 24 chr17 86741051 86741136 -8531515 + HAL1 LINE L1 1390 1478 -1029 4 1246 345 187 0 0 chr17 86742007 86742082 -8530569 + (CGTG)n Simple_repeat Simple_repeat 1 75 0 4 1246 275 274 16 16 chr17 86742084 86742147 -8530504 - ID4 SINE ID -6 77 15 4 1246 318 281 0 11 chr17 86742928 86743018 -8529633 - MIR SINE MIR -145 117 29 4 1246 737 87 9 0 chr17 86743084 86743199 -8529452 + (GA)n Simple_repeat Simple_repeat 1 116 0 4 1246 436 292 35 0 chr17 86743918 86744031 -8528620 + B4A SINE B4 3 119 -173 4 1246 273 255 105 129 chr17 86744113 86744284 -8528367 + B4 SINE B4 126 292 0 4 1246 747 322 91 16 chr17 86744979 86745444 -8527207 - L1ME2 LINE L1 -1 6178 5677 4 1246 333 238 12 12 chr17 86745564 86745645 -8527006 + ID4_ SINE ID 1 81 -2 4 1246 722 303 93 31 chr17 86745756 86746015 -8526636 - B4A SINE B4 -9 283 9 4 1246 423 132 0 0 chr17 86746555 86746623 -8526028 + (TCCC)n Simple_repeat Simple_repeat 2 69 0 4 1246 897 284 42 45 chr17 86746730 86747018 -8525633 - B4A SINE B4 0 292 6 4 1246 397 285 35 28 chr17 86747022 86747163 -8525488 - B1F SINE Alu 0 149 8 4 1246 414 0 0 0 chr17 86747638 86747684 -8524967 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1246 349 255 110 60 chr17 86747922 86747942 -8524709 - PB1D10 SINE Alu -10 107 93 4 1246 2807 50 24 0 chr17 86747942 86748280 -8524371 - ORR1A1 LTR MaLR 0 346 1 4 1246 349 255 110 60 chr17 86748280 86748359 -8524292 - PB1D10 SINE Alu -25 92 3 4 1246 354 98 0 0 chr17 86748957 86749008 -8523643 + (TCTCTG)n Simple_repeat Simple_repeat 2 52 0 4 1246 795 115 0 0 chr17 86749268 86749398 -8523253 + (TG)n Simple_repeat Simple_repeat 2 131 0 4 1246 556 278 77 26 chr17 86749404 86749559 -8523092 - RSINE1 SINE B4 0 165 3 4 1246 375 279 245 31 chr17 86749599 86749795 -8522856 - MIRb SINE MIR -13 255 18 4 1246 208 311 154 47 chr17 86751446 86751615 -8521036 - L2c LINE L2 -101 3286 3100 4 1246 367 338 96 19 chr17 86752491 86752648 -8520003 - MER20 DNA MER1_type -35 184 16 4 1246 447 112 0 0 chr17 86753864 86753944 -8518707 + (CA)n Simple_repeat Simple_repeat 1 80 0 4 1246 243 0 0 0 chr17 86753945 86753972 -8518679 + (GA)n Simple_repeat Simple_repeat 2 28 0 4 1246 1028 150 109 10 chr17 86754019 86754221 -8518430 + URR1A DNA MER1_type 5 226 0 4 1246 226 342 73 73 chr17 86754579 86754702 -8517949 + PB1 SINE Alu 3 125 -2 4 1246 322 278 122 64 chr17 86758029 86758233 -8514418 - L3b LINE CR1 -247 235 20 4 1246 1326 62 2 0 chr17 86759727 86760202 -8512449 + (TCC)n Simple_repeat Simple_repeat 1 475 0 4 1246 183 42 0 0 chr17 86760790 86760814 -8511837 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1246 420 20 0 0 chr17 86761544 86761593 -8511058 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1246 297 0 0 0 chr17 86763297 86763330 -8509321 + (TC)n Simple_repeat Simple_repeat 2 34 0 4 1246 261 0 0 0 chr17 86763330 86763358 -8509293 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1246 531 144 0 0 chr17 86763359 86763484 -8509167 + (GA)n Simple_repeat Simple_repeat 2 126 0 4 1246 662 230 7 7 chr17 86763562 86763711 -8508940 + B1_Mur1 SINE Alu 1 149 0 4 1246 445 291 15 15 chr17 86764003 86764139 -8508512 - MER5A1 DNA MER1_type -29 137 2 4 1246 277 254 0 0 chr17 86765349 86765412 -8507239 + PB1D10 SINE Alu 55 117 0 4 1246 566 258 48 18 chr17 86766238 86766404 -8506247 + RMER15 LTR ERVL 405 575 0 4 1246 571 347 83 67 chr17 86766488 86766936 -8505715 - Tigger8 DNA MER2_type -2 664 210 4 1246 26 0 0 0 chr17 86767445 86767471 -8505180 + AT_rich Low_complexity Low_complexity 1 26 0 4 1246 308 240 83 60 chr17 86767692 86767825 -8504826 - L1ME3B LINE L1 -211 6029 5894 4 1246 1025 228 30 30 chr17 86768168 86768367 -8504284 - B3 SINE B2 -7 209 11 4 1246 2123 286 149 37 chr17 86768428 86768543 -8504108 - Lx8 LINE L1 -1 7472 7358 4 1246 254 95 0 23 chr17 86768543 86768586 -8504065 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1246 2123 286 149 37 chr17 86768586 86769607 -8503044 - Lx8 LINE L1 -116 7357 6211 4 1247 291 268 141 45 chr17 86770080 86770231 -8502420 + L2a LINE L2 3236 3422 -4 4 1247 345 47 0 0 chr17 86771294 86771337 -8501314 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1247 315 0 0 0 chr17 86771337 86771371 -8501280 + (GA)n Simple_repeat Simple_repeat 2 36 0 4 1247 453 145 0 0 chr17 86771775 86771851 -8500800 + (TA)n Simple_repeat Simple_repeat 2 77 0 4 1247 186 43 0 0 chr17 86772769 86772792 -8499859 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 4 1247 356 333 31 66 chr17 86773180 86773376 -8499275 - MER5A DNA MER1_type 0 189 1 4 1247 318 305 0 10 chr17 86773427 86773523 -8499128 + (CACG)n Simple_repeat Simple_repeat 1 95 0 4 1247 296 256 33 22 chr17 86773737 86773829 -8498822 - MER5A1 DNA MER1_type -36 130 38 4 1247 666 304 92 28 chr17 86774049 86774333 -8498318 + MLT1A1 LTR MaLR 106 407 -1 4 1247 198 314 0 0 chr17 86774345 86774396 -8498255 - MER5B DNA MER1_type -5 173 123 4 1247 364 229 0 24 chr17 86774437 86774522 -8498129 + ID4 SINE ID 1 83 0 4 1247 415 257 151 22 chr17 86774580 86774759 -8497892 - MER3 DNA MER1_type 0 209 8 4 1247 233 296 0 54 chr17 86774867 86774960 -8497691 + MER5B DNA MER1_type 75 162 -16 4 1247 425 248 43 14 chr17 86775195 86775334 -8497317 + MER53 DNA hAT 5 147 -46 4 1247 937 140 0 14 chr17 86776728 86776873 -8495778 + B1_Mus1 SINE Alu 6 148 0 4 1247 370 262 44 94 chr17 86776732 86776892 -8495759 + B4A SINE B4 94 245 -47 4 1247 236 130 22 0 chr17 86776893 86776939 -8495712 + GA-rich Low_complexity Low_complexity 1 47 0 4 1247 232 250 0 0 chr17 86777518 86777570 -8495081 - MIRb SINE MIR -9 259 208 4 1247 495 319 170 22 chr17 86779565 86780164 -8492487 - L2a LINE L2 -303 3123 2429 4 1247 353 294 26 44 chr17 86780430 86780544 -8492107 - PB1D10 SINE Alu -3 114 3 4 1247 329 229 0 16 chr17 86781167 86781229 -8491422 + ID4 SINE ID 7 67 -16 4 1247 313 230 0 108 chr17 86781229 86781249 -8491402 + tRNA-Ala-GCY_ tRNA tRNA 2 74 -1 4 1247 842 94 0 7 chr17 86782026 86782166 -8490485 + (TC)n Simple_repeat Simple_repeat 2 140 0 4 1247 180 0 0 0 chr17 86782258 86782278 -8490373 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1247 569 333 65 21 chr17 86783168 86783447 -8489204 + B4A SINE B4 1 291 -1 4 1247 630 287 27 37 chr17 86784618 86784806 -8487845 - B4A SINE B4 -6 286 101 4 1247 258 247 0 13 chr17 86784878 86784956 -8487695 - L1M5 LINE L1 -3960 2186 2110 4 1247 261 0 0 0 chr17 86784962 86784991 -8487660 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 4 1247 782 230 158 17 chr17 86785773 86786007 -8486644 - MTD LTR MaLR -14 405 139 4 1247 8196 24 0 1 chr17 86786007 86787469 -8485182 - L1Md_T LINE L1 -1 6581 5121 4 1247 555 232 80 0 chr17 86787469 86787594 -8485057 - MTD LTR MaLR -267 152 18 4 1247 529 72 12 12 chr17 86788747 86788831 -8483820 + (TAGA)n Simple_repeat Simple_repeat 2 85 0 4 1247 2668 58 0 0 chr17 86790530 86790859 -8481792 - L1Md_F2 LINE L1 0 6582 6254 4 1247 274 61 41 0 chr17 86791430 86791479 -8481172 + (CAAAAA)n Simple_repeat Simple_repeat 3 53 0 4 1247 250 296 40 20 chr17 86794406 86794506 -8478145 - MTEb LTR MaLR 0 379 278 4 1247 411 68 0 0 chr17 86794510 86794569 -8478082 + (TTAGGG)n Simple_repeat Simple_repeat 4 62 0 4 1247 675 224 67 56 chr17 86794792 86794972 -8477679 + URR1A DNA MER1_type 45 226 0 4 1247 455 275 67 50 chr17 86795071 86795251 -8477400 - MER2 DNA MER2_type -6 339 157 4 1247 495 296 11 100 chr17 86795449 86795629 -8477022 - RSINE1 SINE B4 0 165 2 4 1247 196 273 0 70 chr17 86797811 86797882 -8474769 + MIRc SINE MIR 96 161 -101 4 1247 1059 252 37 30 chr17 86798552 86798822 -8473829 + B4A SINE B4 1 272 -20 4 1247 207 0 0 0 chr17 86800221 86800244 -8472407 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1247 965 153 0 0 chr17 86800244 86800381 -8472270 - B1_Mus1 SINE Alu -10 138 2 4 1247 1543 26 10 30 chr17 86800718 86800917 -8471734 - B2_Mm2 SINE B2 0 195 1 4 1247 329 315 139 29 chr17 86800948 86801211 -8471440 + B4A SINE B4 12 281 -11 4 1247 760 149 14 0 chr17 86801827 86801960 -8470691 + GA-rich Low_complexity Low_complexity 1 135 0 4 1247 1104 133 0 0 chr17 86801960 86802140 -8470511 + (GA)n Simple_repeat Simple_repeat 1 180 0 5 1247 760 149 14 0 chr17 86802140 86802154 -8470497 + polypurine Low_complexity Low_complexity 136 149 0 5 1247 303 28 0 0 chr17 86802501 86802537 -8470114 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1247 516 269 42 14 chr17 86802539 86802682 -8469969 - B3A SINE B2 -51 147 1 5 1247 273 167 0 0 chr17 86802950 86803004 -8469647 + CT-rich Low_complexity Low_complexity 1 54 0 5 1247 672 255 7 33 chr17 86803013 86803163 -8469488 - B1_Mur1 SINE Alu -1 148 3 5 1247 427 258 223 9 chr17 86803214 86803425 -8469226 - MLT1F1 LTR MaLR -3 566 311 5 1247 248 329 57 63 chr17 86803472 86803631 -8469020 - MLT1F1 LTR MaLR -400 169 12 5 1247 243 0 0 0 chr17 86804780 86804807 -8467844 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1247 892 146 0 0 chr17 86804815 86804945 -8467706 - B1_Mur4 SINE Alu -20 130 1 5 1247 418 206 45 154 chr17 86804945 86805031 -8467620 - MT2B LTR ERVL -452 149 86 5 1247 585 299 108 42 chr17 86805202 86805555 -8467096 + L1MB4 LINE L1 5483 5858 -322 5 1247 1262 40 0 0 chr17 86805570 86805718 -8466933 - B1_Mus1 SINE Alu 0 148 1 5 1247 298 143 0 0 chr17 86805748 86805797 -8466854 + Lx4A LINE L1 6902 6950 -108 5 1247 237 33 0 0 chr17 86805867 86805897 -8466754 + (TAA)n Simple_repeat Simple_repeat 2 31 0 5 1247 316 299 17 0 chr17 86805897 86806014 -8466637 + L1MB4 LINE L1 5863 5981 -190 5 1247 202 301 74 89 chr17 86806228 86806418 -8466233 - L2c LINE L2 -104 3283 3097 5 1247 418 333 20 51 chr17 86808667 86808863 -8463788 - MER53 DNA hAT 0 193 4 5 1247 964 198 17 47 chr17 86810503 86810736 -8461915 - URR1A DNA MER1_type 0 226 1 5 1247 413 121 0 15 chr17 86810919 86810986 -8461665 + URR1B DNA MER1_type 160 225 0 5 1247 216 421 43 25 chr17 86812494 86812657 -8459994 + MIRb SINE MIR 75 240 -28 5 1247 1639 141 17 20 chr17 86813090 86813387 -8459264 + Lx LINE L1 6317 6612 -42 5 1247 645 49 0 0 chr17 86813394 86813475 -8459176 + (GAAAA)n Simple_repeat Simple_repeat 4 84 0 5 1247 288 0 0 0 chr17 86813673 86813705 -8458946 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1247 329 264 108 54 chr17 86814412 86814560 -8458091 - MIRb SINE MIR -48 220 65 5 1247 2452 60 54 0 chr17 86814768 86815085 -8457566 + L1_Mus3 LINE L1 6288 6621 -17 5 1247 204 40 0 0 chr17 86815085 86815110 -8457541 + (TAA)n Simple_repeat Simple_repeat 3 27 0 5 1247 220 173 39 0 chr17 86815212 86815264 -8457387 + CT-rich Low_complexity Low_complexity 2 55 0 5 1247 297 0 0 0 chr17 86815264 86815297 -8457354 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1247 440 265 35 35 chr17 86816783 86816814 -8455837 + CYRA11_Mm Unknown Y-chromosome 145 175 -442 5 1247 1005 92 14 0 chr17 86816814 86816956 -8455695 - URR1A DNA MER1_type -2 224 81 5 1247 254 246 164 30 chr17 86817218 86817285 -8455366 + ID4_ SINE ID 8 83 0 5 1247 736 241 229 25 chr17 86819389 86819704 -8452947 + MTEb LTR MaLR 1 379 0 5 1247 478 281 23 70 chr17 86820787 86820959 -8451692 + RSINE1 SINE B4 2 165 0 5 1247 293 315 85 0 chr17 86820977 86821107 -8451544 + RSINE1 SINE B4 15 155 -10 5 1247 24 67 0 0 chr17 86821113 86821158 -8451493 + AT_rich Low_complexity Low_complexity 1 45 0 5 1247 495 206 0 0 chr17 86823561 86823736 -8448915 + (CA)n Simple_repeat Simple_repeat 2 176 0 5 1247 441 222 0 0 chr17 86823785 86823920 -8448731 + (CA)n Simple_repeat Simple_repeat 2 136 0 5 1247 624 330 0 0 chr17 86824470 86824646 -8448005 + (CCCCAG)n Simple_repeat Simple_repeat 1 176 0 5 1247 712 269 115 3 chr17 86825520 86825815 -8446836 + L1MB8 LINE L1 5552 5879 -299 5 1247 26 88 0 0 chr17 86825985 86826053 -8446598 + AT_rich Low_complexity Low_complexity 1 68 0 5 1247 514 257 28 7 chr17 86826491 86826636 -8446015 + B1_Mur2 SINE Alu 2 149 0 5 1247 31 0 0 0 chr17 86826641 86826672 -8445979 + AT_rich Low_complexity Low_complexity 1 31 0 5 1247 785 186 99 23 chr17 86826677 86826848 -8445803 + B3 SINE B2 1 184 -32 5 1247 232 295 19 78 chr17 86826967 86827070 -8445581 - MIR3 SINE MIR -47 161 65 5 1247 585 264 34 27 chr17 86827749 86827897 -8444754 + B3A SINE B2 8 156 -42 5 1247 225 0 0 0 chr17 86827899 86827924 -8444727 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 1247 406 218 53 93 chr17 86828156 86828581 -8444070 + HAL1-2a_MD LINE L1 2323 2513 -511 5 1247 203 221 56 42 chr17 86828599 86828670 -8443981 - MIRc SINE MIR -34 234 163 5 1247 216 0 0 0 chr17 86828679 86828703 -8443948 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1247 454 272 81 17 chr17 86828841 86829013 -8443638 - MER2 DNA MER2_type -48 297 115 5 1247 450 0 0 0 chr17 86829480 86829530 -8443121 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1247 780 168 76 0 chr17 86830834 86830965 -8441686 + B1_Mur1 SINE Alu 1 141 -8 5 1247 210 220 27 20 chr17 86830974 86831072 -8441579 + A-rich Low_complexity Low_complexity 1 98 0 5 1247 1232 220 106 53 chr17 86832290 86832650 -8440001 - MTE2b LTR MaLR 0 379 1 5 1247 476 118 336 26 chr17 86832939 86832952 -8439699 - B1_Mus1 SINE Alu 0 148 137 5 1247 594 0 0 0 chr17 86832952 86833018 -8439633 + (TTTTG)n Simple_repeat Simple_repeat 4 69 0 5 1247 476 118 336 26 chr17 86833018 86833117 -8439534 - B1_Mus1 SINE Alu -12 136 1 5 1247 182 105 26 0 chr17 86833564 86833602 -8439049 + (TGG)n Simple_repeat Simple_repeat 3 41 0 5 1247 1707 234 101 14 chr17 86833661 86833917 -8438734 - RLTR11A2 LTR ERVK 0 527 259 5 1247 890 71 16 0 chr17 86833917 86834043 -8438608 + (TTCC)n Simple_repeat Simple_repeat 4 131 0 5 1247 1707 234 101 14 chr17 86834043 86834271 -8438380 - RLTR11A2 LTR ERVK -269 258 1 5 1247 1191 81 0 0 chr17 86834454 86834602 -8438049 - B1_Mus1 SINE Alu 0 148 1 5 1247 535 339 34 45 chr17 86834998 86835264 -8437387 - ORR1E LTR MaLR -96 263 1 5 1247 700 140 27 23 chr17 86835280 86835767 -8436884 + (CA)n Simple_repeat Simple_repeat 1 488 0 5 1247 320 93 0 0 chr17 86835798 86835841 -8436810 + HAL1-3A_ME LINE L1 1976 2018 -840 5 1247 251 370 102 17 chr17 86835860 86836036 -8436615 - MIRb SINE MIR -34 234 44 5 1247 986 160 202 0 chr17 86836671 86836859 -8435792 - URR1A DNA MER1_type 0 226 1 5 1247 396 0 0 0 chr17 86839352 86839396 -8433255 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1247 387 0 0 0 chr17 86839396 86839438 -8433213 + (GA)n Simple_repeat Simple_repeat 1 43 0 5 1247 632 246 7 15 chr17 86839441 86839577 -8433074 - B3A SINE B2 -62 136 2 5 1247 380 220 20 0 chr17 86839635 86839733 -8432918 - PB1 SINE Alu -1 148 46 5 1247 275 268 203 7 chr17 86840202 86840345 -8432306 - L1ME3A LINE L1 -12 6161 5991 5 1247 348 345 53 37 chr17 86840462 86840649 -8432002 - L1ME3A LINE L1 -400 5773 5584 5 1247 718 277 149 30 chr17 86840783 86841252 -8431399 - L1MB3 LINE L1 -6 6177 5653 5 1247 207 0 0 0 chr17 86841255 86841278 -8431373 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 1247 288 295 139 0 chr17 86841321 86841340 -8431311 - ID_B1 SINE B4 0 224 86 5 1247 356 272 97 0 chr17 86841340 86841443 -8431208 - B1F1 SINE Alu -32 117 5 5 1247 608 282 132 21 chr17 86841495 86841839 -8430812 - L1MB3 LINE L1 -779 5394 5012 5 1247 182 220 17 0 chr17 86841986 86842045 -8430606 + CT-rich Low_complexity Low_complexity 5 64 0 5 1247 868 135 0 18 chr17 86842057 86842147 -8430504 + polypyrimidine Low_complexity Low_complexity 79 167 0 5 1247 1164 73 0 33 chr17 86842147 86842331 -8430320 + (TCCCC)n Simple_repeat Simple_repeat 3 180 0 5 1247 868 135 0 18 chr17 86842331 86842406 -8430245 + polypyrimidine Low_complexity Low_complexity 6 78 0 5 1247 214 186 0 23 chr17 86842410 86842454 -8430197 + CT-rich Low_complexity Low_complexity 5 47 0 5 1247 343 287 71 71 chr17 86842458 86842612 -8430039 - HAL1-3A_ME LINE L1 -420 2438 2285 5 1247 590 275 0 0 chr17 86842677 86842815 -8429836 - ID_B1 SINE B4 0 224 87 5 1247 257 230 136 42 chr17 86843156 86843274 -8429377 + Tigger13a DNA MER2_type 288 416 -355 5 1247 22 0 0 0 chr17 86843688 86843710 -8428941 + AT_rich Low_complexity Low_complexity 1 22 0 5 1247 400 245 17 94 chr17 86844595 86844712 -8427939 - PB1D10 SINE Alu -3 114 7 5 1247 468 289 24 53 chr17 86845138 86845158 -8427493 - ID_B1 SINE B4 -44 248 182 5 1247 652 223 15 0 chr17 86845158 86845288 -8427363 - B1F1 SINE Alu 0 149 18 5 1247 468 289 24 53 chr17 86845288 86845318 -8427333 - ID_B1 SINE B4 -44 181 70 5 1247 1911 154 84 98 chr17 86847080 86847535 -8425116 - RMER16 LTR ERVK 0 533 10 5 1247 17002 102 23 9 chr17 86847545 86850123 -8422528 - RMER16-int LTR ERVK 0 5406 2793 5 1247 441 0 0 0 chr17 86850532 86850581 -8422070 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1247 500 0 17 0 chr17 86850581 86850640 -8422011 + (GA)n Simple_repeat Simple_repeat 2 62 0 5 1247 886 170 7 0 chr17 86850703 86850850 -8421801 + B1_Mus1 SINE Alu 1 148 0 5 1247 278 284 11 33 chr17 86850854 86850945 -8421706 + GA-rich Low_complexity Low_complexity 4 92 0 5 1247 459 0 0 0 chr17 86852380 86852431 -8420220 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 1247 351 0 0 0 chr17 86852763 86852802 -8419849 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 1247 22 56 0 0 chr17 86853071 86853107 -8419544 + AT_rich Low_complexity Low_complexity 1 36 0 5 1247 189 255 0 38 chr17 86853198 86853251 -8419400 - L2c LINE L2 -240 3147 3097 5 1247 447 227 35 35 chr17 86853888 86854002 -8418649 - PB1D9 SINE Alu -6 114 1 5 1247 840 257 15 56 chr17 86854020 86854031 -8418620 - B3A SINE B2 -7 191 182 5 1247 333 0 0 0 chr17 86854031 86854068 -8418583 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 1247 420 71 0 0 chr17 86854068 86854123 -8418528 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1247 840 257 15 56 chr17 86854123 86854308 -8418343 - B3A SINE B2 -17 181 3 5 1247 1826 220 15 22 chr17 86854951 86855356 -8417295 - RLTR17 LTR ERVK -85 607 206 5 1247 302 267 223 19 chr17 86856776 86857044 -8415607 + L1MB7 LINE L1 5775 6092 -92 5 1247 956 165 33 11 chr17 86858045 86858229 -8414422 - B2_Mm2 SINE B2 -7 188 1 5 1247 841 113 22 15 chr17 86858359 86858494 -8414157 - B1_Mur3 SINE Alu -1 148 13 6 1247 341 231 0 173 chr17 86858395 86858557 -8414094 - MT2B LTR ERVL -337 264 131 6 1247 21 0 0 0 chr17 86859108 86859129 -8413522 + AT_rich Low_complexity Low_complexity 1 21 0 6 1247 326 248 57 9 chr17 86859656 86859762 -8412889 - PB1D10 SINE Alu -3 114 4 6 1247 588 295 75 36 chr17 86860539 86860817 -8411834 + ORR1E LTR MaLR 1 289 -70 6 1247 873 169 32 63 chr17 86860885 86861075 -8411576 - RLTR28B LTR ERVL -297 184 1 6 1247 414 289 92 20 chr17 86862007 86862185 -8410466 - B4A SINE B4 -18 274 85 6 1247 387 0 0 0 chr17 86862324 86862367 -8410284 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1247 646 266 51 36 chr17 86862483 86862678 -8409973 - RMER30 DNA MER1_type 0 202 5 6 1247 187 331 106 14 chr17 86862861 86863002 -8409649 - MER5B DNA MER1_type -1 177 24 6 1247 457 276 159 58 chr17 86863420 86863678 -8408973 + B4 SINE B4 9 292 0 6 1247 222 368 13 13 chr17 86864541 86864618 -8408033 + MER5A DNA MER1_type 38 114 -75 6 1247 282 252 0 0 chr17 86864680 86864779 -8407872 + (TG)n Simple_repeat Simple_repeat 2 100 0 6 1247 705 82 0 0 chr17 86866064 86866161 -8406490 + (GA)n Simple_repeat Simple_repeat 1 97 0 6 1247 253 200 89 51 chr17 86866480 86866559 -8406092 - L1ME1 LINE L1 -29 6150 6069 6 1247 348 282 9 18 chr17 86866835 86866947 -8405704 - L1MC LINE L1 -2050 5735 5625 6 1247 22 0 0 0 chr17 86867807 86867829 -8404822 + AT_rich Low_complexity Low_complexity 1 22 0 6 1247 545 314 129 0 chr17 86869619 86869829 -8402822 - MTEb LTR MaLR -140 239 3 6 1247 265 177 32 0 chr17 86869894 86869956 -8402695 + A-rich Low_complexity Low_complexity 2 65 0 6 1247 323 306 64 18 chr17 86871228 86871338 -8401313 + B1_Mur3 SINE Alu 2 116 -33 6 1247 309 358 67 76 chr17 86871666 86872141 -8400510 - L1M5 LINE L1 -313 5811 5341 6 1247 770 107 16 0 chr17 86872239 86872361 -8400290 + (GGGA)n Simple_repeat Simple_repeat 3 126 0 6 1247 202 119 47 23 chr17 86872372 86872415 -8400236 + CT-rich Low_complexity Low_complexity 1 44 0 6 1247 369 279 9 9 chr17 86872679 86872784 -8399867 - PB1D7 SINE Alu -11 109 5 6 1247 212 304 114 56 chr17 86873027 86873172 -8399479 - MIRc SINE MIR -86 182 34 6 1247 915 89 0 56 chr17 86873285 86873427 -8399224 + B1_Mus1 SINE Alu 5 138 -10 6 1247 306 0 0 0 chr17 86873544 86873578 -8399073 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 1247 587 195 106 0 chr17 86873908 86874021 -8398630 + B1_Mur1 SINE Alu 3 127 -22 6 1247 594 73 83 18 chr17 86876479 86876647 -8396004 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 6 1247 989 56 68 10 chr17 86876688 86877188 -8395463 + (TCTA)n Simple_repeat Simple_repeat 1 528 0 6 1247 462 18 0 0 chr17 86877216 86877271 -8395380 + (TC)n Simple_repeat Simple_repeat 2 56 0 6 1247 693 248 15 0 chr17 86877271 86877408 -8395243 - B1_Mur2 SINE Alu -10 139 1 6 1247 215 278 73 65 chr17 86877623 86877746 -8394905 - MIR SINE MIR -100 162 39 6 1247 984 232 0 59 chr17 86877882 86878120 -8394531 - URR1B DNA MER1_type 0 225 2 6 1247 968 240 49 0 chr17 86878598 86878802 -8393849 + ID_B1 SINE B4 11 224 0 6 1247 213 327 117 9 chr17 86878941 86879052 -8393599 - L2b LINE L2 -3 3372 3250 6 1247 404 19 19 0 chr17 86879463 86879516 -8393135 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 1247 194 275 165 0 chr17 86882072 86882181 -8390470 - MIR3 SINE MIR -80 128 2 6 1247 741 121 43 8 chr17 86882969 86883086 -8389565 + B1_Mur3 SINE Alu 9 129 -20 6 1247 933 9 0 0 chr17 86883092 86883198 -8389453 + (TC)n Simple_repeat Simple_repeat 1 106 0 6 1247 180 0 0 0 chr17 86883198 86883217 -8389434 + (CA)n Simple_repeat Simple_repeat 1 20 0 6 1247 279 0 0 0 chr17 86883511 86883542 -8389109 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1247 476 328 28 6 chr17 86884287 86884465 -8388186 - L1MC1 LINE L1 -31 6477 6296 6 1247 452 282 18 91 chr17 86884543 86884828 -8387823 - L1MC1 LINE L1 -624 5895 5632 6 1247 504 48 0 0 chr17 86884866 86884929 -8387722 + (TC)n Simple_repeat Simple_repeat 1 63 0 6 1247 577 256 139 38 chr17 86884965 86885331 -8387320 - L1MC1 LINE L1 -2963 3358 2956 6 1247 708 283 72 16 chr17 86885829 86886048 -8386603 - L1MC1 LINE L1 -3403 2918 2691 6 1247 225 0 0 0 chr17 86886048 86886073 -8386578 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 6 1247 708 283 72 16 chr17 86886073 86886241 -8386410 - L1MC1 LINE L1 -3631 2690 2509 6 1247 734 272 51 51 chr17 86886287 86886523 -8386128 - MER44B DNA MER2_type -19 531 296 6 1247 309 213 0 76 chr17 86886671 86886737 -8385914 - ID4_ SINE ID -18 65 5 6 1247 476 206 135 0 chr17 86886757 86886883 -8385768 - L1MC1 LINE L1 -5607 901 759 6 1247 396 0 0 0 chr17 86887988 86888032 -8384619 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 6 1247 1012 147 13 0 chr17 86888049 86888205 -8384446 - URR1B DNA MER1_type -3 222 65 6 1247 448 268 34 62 chr17 86888205 86888218 -8384433 + CYRA11_Mm Unknown Y-chromosome 231 338 -279 6 1247 414 0 0 0 chr17 86892102 86892148 -8380503 + (TGAG)n Simple_repeat Simple_repeat 2 47 0 6 1247 378 0 0 0 chr17 86892822 86892864 -8379787 + (GGGA)n Simple_repeat Simple_repeat 3 44 0 6 1247 1062 83 147 0 chr17 86894407 86894564 -8378087 + B2_Mm2 SINE B2 2 181 -14 6 1247 388 286 57 0 chr17 86894848 86894953 -8377698 + PB1D10 SINE Alu 6 116 -1 6 1247 552 68 0 0 chr17 86896182 86896255 -8376396 + (TG)n Simple_repeat Simple_repeat 1 73 0 6 1247 206 254 186 0 chr17 86896273 86896332 -8376319 - L2c LINE L2 -35 3352 3283 6 1247 274 219 58 47 chr17 86896447 86896533 -8376118 - MER103 DNA DNA -67 99 13 6 1247 333 330 26 52 chr17 86896919 86897034 -8375617 - PB1D7 SINE Alu -8 112 1 6 1247 1465 237 63 6 chr17 86897747 86898095 -8374556 + ORR1D2 LTR MaLR 1 368 -2 6 1247 184 262 30 15 chr17 86900215 86900281 -8372370 - L2 LINE L2 -611 2808 2742 6 1247 292 256 122 0 chr17 86900488 86900578 -8372073 + PB1D10 SINE Alu 14 114 -3 6 155 284 309 67 67 chr17 86900694 86900829 -8371822 - B4A SINE B4 0 292 158 6 1248 804 225 7 0 chr17 86901058 86901200 -8371451 - B1_Mur2 SINE Alu -1 148 6 6 1248 275 324 8 103 chr17 86901101 86901218 -8371433 - MT2B LTR ERVL -344 257 152 6 1248 327 173 0 0 chr17 86901218 86901270 -8371381 - L1ME4a LINE L1 -32 6092 6041 6 1248 267 31 0 0 chr17 86901683 86901715 -8370936 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 1248 221 336 0 53 chr17 86901797 86901948 -8370703 + (TG)n Simple_repeat Simple_repeat 1 143 0 6 1248 674 104 10 0 chr17 86903524 86903620 -8369031 - B1_Mur3 SINE Alu -10 139 43 6 1248 227 283 116 32 chr17 86903696 86903791 -8368860 + MLT1A1 LTR MaLR 21 123 -285 6 1248 270 262 31 56 chr17 86904234 86904343 -8368308 - MIR SINE MIR -90 118 15 6 1248 210 158 0 0 chr17 86905418 86905456 -8367195 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 6 1248 399 333 24 0 chr17 86905462 86905585 -8367066 - B1F SINE Alu 0 149 24 6 1248 357 24 0 0 chr17 86905796 86905838 -8366813 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1248 267 54 0 0 chr17 86905838 86905875 -8366776 + (GA)n Simple_repeat Simple_repeat 2 38 0 6 1248 186 188 0 0 chr17 86906134 86906166 -8366485 - MIR SINE MIR -60 148 117 6 1248 531 0 0 0 chr17 86906927 86906986 -8365665 + (TC)n Simple_repeat Simple_repeat 1 59 0 6 1248 577 220 0 35 chr17 86908137 86908250 -8364401 + B1_Mur2 SINE Alu 21 129 -20 6 1248 339 25 0 0 chr17 86908497 86908537 -8364114 + (TC)n Simple_repeat Simple_repeat 2 41 0 6 1248 315 0 0 0 chr17 86908537 86908572 -8364079 + (TTTTTG)n Simple_repeat Simple_repeat 6 40 0 6 1248 1234 48 0 0 chr17 86908572 86908718 -8363933 - B1_Mm SINE Alu 0 147 2 6 1248 240 206 14 29 chr17 86909905 86909975 -8362676 + (GGATG)n Simple_repeat Simple_repeat 3 71 0 6 1248 992 252 83 11 chr17 86910390 86910655 -8361996 - B4 SINE B4 -8 284 1 6 1248 204 388 10 20 chr17 86911311 86911411 -8361240 + MIR SINE MIR 156 254 -8 6 1248 292 290 73 18 chr17 86911823 86911932 -8360719 - L2a LINE L2 -4 3422 3308 6 1248 714 154 0 0 chr17 86912046 86912195 -8360456 + CT-rich Low_complexity Low_complexity 2 150 0 6 1248 333 0 0 0 chr17 86912196 86912233 -8360418 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1248 515 297 36 24 chr17 86912233 86912437 -8360214 - L2a LINE L2 -215 3172 2967 6 1248 706 263 191 9 chr17 86913716 86913946 -8358705 + B4 SINE B4 18 289 -3 6 1248 228 273 14 7 chr17 86913949 86914093 -8358558 + (CA)n Simple_repeat Simple_repeat 1 145 0 6 1248 802 270 40 5 chr17 86914118 86914319 -8358332 + B3 SINE B2 9 216 0 6 1248 252 256 7 20 chr17 86915011 86915323 -8357328 + (CA)n Simple_repeat Simple_repeat 1 307 0 6 1248 294 148 9 47 chr17 86915415 86915521 -8357130 + (CA)n Simple_repeat Simple_repeat 1 102 0 6 1248 347 24 0 0 chr17 86915552 86915593 -8357058 + HAL1-3A_ME LINE L1 1977 2017 -841 6 1248 282 352 0 11 chr17 86916210 86916299 -8356352 + MIR SINE MIR 70 157 -105 6 1248 1182 69 14 0 chr17 86918780 86918925 -8353726 + B1_Mus2 SINE Alu 1 147 0 6 1248 333 0 0 0 chr17 86919069 86919106 -8353545 + (CTG)n Simple_repeat Simple_repeat 1 37 0 6 1248 762 11 0 0 chr17 86919106 86919193 -8353458 + (TTC)n Simple_repeat Simple_repeat 2 88 0 6 1248 354 211 0 0 chr17 86919264 86919321 -8353330 + B1F SINE Alu 61 117 -32 6 1248 270 234 91 0 chr17 86919266 86919343 -8353308 + ID_B1 SINE B4 141 224 0 6 1248 249 306 44 44 chr17 86919501 86919614 -8353037 - PB1 SINE Alu -8 119 7 6 1248 658 233 117 39 chr17 86920303 86920482 -8352169 - B4 SINE B4 -96 196 4 6 1248 572 323 55 0 chr17 86921463 86921664 -8350987 + B3 SINE B2 2 213 -3 6 1248 569 288 89 11 chr17 86923406 86923585 -8349066 - B4A SINE B4 -86 206 14 7 1248 432 277 0 0 chr17 86923953 86924054 -8348597 - PB1D10 SINE Alu -16 101 1 7 1248 402 243 43 51 chr17 86924912 86925029 -8347622 - PB1D10 SINE Alu 0 117 2 7 1248 804 111 0 0 chr17 86925907 86926033 -8346618 + (TTCC)n Simple_repeat Simple_repeat 3 128 0 7 1248 462 292 167 34 chr17 86926997 86927499 -8345152 + L1M4 LINE L1 4211 4779 -1367 7 1248 1467 312 79 52 chr17 86927883 86928649 -8344002 - L1_Mur3 LINE L1 -3144 3002 2184 7 1248 251 28 28 0 chr17 86928649 86928685 -8343966 + (TTG)n Simple_repeat Simple_repeat 2 38 0 7 1248 1467 311 81 53 chr17 86928685 86929214 -8343437 - L1_Mur3 LINE L1 -3697 2183 1636 7 1248 700 215 0 20 chr17 86929614 86929761 -8342890 - B1_Mus2 SINE Alu -2 145 2 7 1248 211 264 100 7 chr17 86930555 86930667 -8341984 + MIRb SINE MIR 36 167 -101 7 1248 513 0 0 0 chr17 86931000 86931057 -8341594 + (TC)n Simple_repeat Simple_repeat 1 57 0 7 1248 453 288 18 0 chr17 86931087 86931198 -8341453 + PB1D7 SINE Alu 1 113 -7 7 1248 346 292 153 55 chr17 86931408 86931571 -8341080 - B3 SINE B2 -11 205 27 7 1248 842 166 13 27 chr17 86933256 86933405 -8339246 - B1_Mur1 SINE Alu -1 148 2 7 1248 279 68 33 17 chr17 86934070 86934130 -8338521 + (TTTG)n Simple_repeat Simple_repeat 2 62 0 7 1248 253 284 25 0 chr17 86934333 86934414 -8338237 + ID4 SINE ID 1 83 0 7 1248 1183 75 0 0 chr17 86935067 86935214 -8337437 + B1_Mus1 SINE Alu 2 148 0 7 1248 200 0 100 0 chr17 86935223 86935253 -8337398 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 7 1248 913 230 14 14 chr17 86936594 86936806 -8335845 - B3 SINE B2 0 216 5 7 1248 240 320 121 13 chr17 86937850 86937891 -8334760 - B4A SINE B4 -38 254 92 7 1248 401 198 85 47 chr17 86937891 86937997 -8334654 - PB1D9 SINE Alu -4 116 7 7 1248 1119 104 0 0 chr17 86938069 86938233 -8334418 + (TCTCCC)n Simple_repeat Simple_repeat 6 169 0 7 1248 216 0 0 0 chr17 86938233 86938256 -8334395 + (TG)n Simple_repeat Simple_repeat 1 24 0 7 1248 302 204 19 0 chr17 86938256 86938310 -8334341 - B3A SINE B2 -49 149 95 7 1248 515 190 28 7 chr17 86938354 86938486 -8334165 - B3A SINE B2 -47 146 2 7 1248 1229 279 60 72 chr17 86940824 86941002 -8331649 - MTD LTR MaLR -22 397 226 7 1248 1036 63 14 34 chr17 86941002 86941149 -8331502 - B1_Mus1 SINE Alu -1 147 4 7 1248 1229 279 60 72 chr17 86941149 86941372 -8331279 - MTD LTR MaLR -194 225 1 7 1248 189 0 0 0 chr17 86941739 86941760 -8330891 + (CAAAC)n Simple_repeat Simple_repeat 2 22 0 7 1248 181 0 69 0 chr17 86942680 86942709 -8329942 + (TTG)n Simple_repeat Simple_repeat 2 32 0 7 1248 191 331 95 40 chr17 86943060 86943208 -8329443 + MIRc SINE MIR 7 162 -106 7 1248 202 250 162 27 chr17 86945868 86945942 -8326709 - L3 LINE CR1 -39 4450 4367 7 1248 328 302 121 7 chr17 86946230 86946370 -8326281 - L3 LINE CR1 -390 4099 3944 7 1248 201 196 0 0 chr17 86946609 86946655 -8325996 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1248 596 315 125 38 chr17 86946922 86947265 -8325386 + Lx8 LINE L1 6913 7285 -188 7 1248 562 307 109 11 chr17 86949188 86949471 -8323180 + L1MB1 LINE L1 5831 6141 -27 7 1248 243 88 0 0 chr17 86949550 86949584 -8323067 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 7 1248 565 222 43 0 chr17 86949586 86949703 -8322948 - ID_B1 SINE B4 -12 212 91 7 1248 620 224 9 29 chr17 86950332 86950497 -8322154 - B3 SINE B2 -31 164 1 7 1248 1181 155 52 0 chr17 86950630 86950843 -8321808 - URR1B DNA MER1_type -1 224 1 7 1248 226 284 0 26 chr17 86950871 86950947 -8321704 + ID4 SINE ID 2 75 -8 7 1248 206 245 139 30 chr17 86951936 86952037 -8320614 - MIRm SINE MIR -5 271 160 7 1248 519 271 181 0 chr17 86952417 86952594 -8320057 - ID_B1 SINE B4 -11 213 5 7 1248 441 0 0 0 chr17 86952661 86952710 -8319941 + (TAAAA)n Simple_repeat Simple_repeat 2 50 0 7 1248 1804 188 47 68 chr17 86952758 86953186 -8319465 - MTD LTR MaLR 0 419 1 7 1248 195 350 55 55 chr17 86953277 86953422 -8319229 - L2c LINE L2 -222 3165 3021 7 1248 711 322 18 11 chr17 86953528 86953801 -8318850 + B4A SINE B4 2 276 -16 7 1248 252 0 0 0 chr17 86953814 86953842 -8318809 + (CA)n Simple_repeat Simple_repeat 2 29 0 7 1248 1170 97 114 0 chr17 86954684 86954859 -8317792 - B2_Mm2 SINE B2 0 195 1 7 1248 300 317 61 20 chr17 86954967 86955121 -8317530 - MIR SINE MIR -93 169 12 7 1248 422 284 177 0 chr17 86955362 86955503 -8317148 + MER5A DNA MER1_type 1 166 -23 7 1248 201 74 0 0 chr17 86955701 86955728 -8316923 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 1248 653 281 39 11 chr17 86955792 86955972 -8316679 - MTE2a LTR MaLR 0 379 195 7 1248 330 250 0 0 chr17 86955972 86956076 -8316575 + (TG)n Simple_repeat Simple_repeat 1 104 0 7 1248 646 243 14 0 chr17 86956467 86956607 -8316044 + ID_B1 SINE B4 63 204 -20 7 1248 930 202 0 0 chr17 86956998 86957161 -8315490 + URR1A DNA MER1_type 64 226 0 7 1248 343 275 133 115 chr17 86957285 86957468 -8315183 - MLT1D LTR MaLR -6 499 304 7 1248 1271 151 27 5 chr17 86957468 86957688 -8314963 + URR1A DNA MER1_type 1 225 -1 7 1248 343 275 133 115 chr17 86957688 86957722 -8314929 - MLT1D LTR MaLR -202 303 278 7 1248 256 283 75 104 chr17 86957791 86957925 -8314726 - MLT1D LTR MaLR -375 130 1 7 1248 828 206 35 20 chr17 86958073 86958276 -8314375 - ID_B1 SINE B4 -18 206 1 7 1248 446 49 16 0 chr17 86959228 86959289 -8313362 + (CA)n Simple_repeat Simple_repeat 1 62 0 7 1248 567 0 0 0 chr17 86959316 86959379 -8313272 + (TC)n Simple_repeat Simple_repeat 2 64 0 7 1248 626 125 31 0 chr17 86959746 86959840 -8312811 - URR1B DNA MER1_type -3 222 126 7 1248 1899 117 19 39 chr17 86959840 86960152 -8312499 + RLTR28 LTR ERVL 1 306 -218 7 1248 415 229 0 0 chr17 86960149 86960232 -8312419 + RLTR28 LTR ERVL 442 524 0 7 1248 779 138 38 15 chr17 86960232 86960359 -8312292 - URR1B DNA MER1_type -96 129 1 7 1248 233 300 78 20 chr17 86960460 86960562 -8312089 - MLT1E1 LTR MaLR -122 531 424 7 1248 287 278 123 14 chr17 86960578 86960724 -8311927 - MLT1E1 LTR MaLR -308 346 185 7 1248 240 294 162 0 chr17 86960760 86960828 -8311823 + PB1 SINE Alu 13 91 -36 7 1248 201 39 0 0 chr17 86960892 86960918 -8311733 + (TTGTG)n Simple_repeat Simple_repeat 2 27 0 7 1248 649 151 33 16 chr17 86961659 86961780 -8310871 + URR1B DNA MER1_type 103 225 0 7 1248 193 337 44 62 chr17 86962141 86962416 -8310235 + L2 LINE L2 2107 2376 -1043 7 1248 269 217 12 0 chr17 86962443 86962526 -8310125 + CT-rich Low_complexity Low_complexity 1 84 0 7 1248 463 323 128 48 chr17 86962871 86963245 -8309406 - MLT1A1 LTR MaLR -2 406 3 7 1248 1227 210 131 40 chr17 86963647 86963844 -8308807 - ORR1C2 LTR MaLR 0 384 183 7 1248 222 37 0 0 chr17 86963844 86963871 -8308780 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 7 1248 1227 210 131 40 chr17 86963871 86964025 -8308626 - ORR1C2 LTR MaLR -202 182 2 7 1248 495 0 0 0 chr17 86964099 86964154 -8308497 + (CCTG)n Simple_repeat Simple_repeat 4 58 0 7 1248 549 378 39 21 chr17 86964647 86964928 -8307723 + B4A SINE B4 1 286 -6 7 1248 201 74 0 0 chr17 86964957 86964984 -8307667 + (CA)n Simple_repeat Simple_repeat 1 27 0 7 1248 1742 203 216 2 chr17 86966038 86966477 -8306174 - MT2A LTR ERVL 0 533 1 7 1248 708 158 0 40 chr17 86967046 86967171 -8305480 + B1_Mus2 SINE Alu 9 128 -19 7 1248 544 311 108 13 chr17 86967357 86967820 -8304831 - HAL1 LINE L1 -273 2234 1728 7 1248 982 238 112 122 chr17 86967924 86968116 -8304535 - MTD LTR MaLR -14 405 202 7 1248 1508 49 6 0 chr17 86968116 86968441 -8304210 + (TTTC)n Simple_repeat Simple_repeat 1 327 0 7 1248 982 238 112 122 chr17 86968441 86968458 -8304193 - MTD LTR MaLR -218 201 194 7 1248 1229 41 0 0 chr17 86968458 86968604 -8304047 - B1_Mus2 SINE Alu 0 147 2 7 1248 982 238 112 122 chr17 86968604 86968783 -8303868 - MTD LTR MaLR -226 193 18 7 1248 296 324 121 32 chr17 86968874 86969123 -8303528 - HAL1 LINE L1 -932 1575 1305 7 1248 268 294 47 8 chr17 86969183 86969310 -8303341 - HAL1 LINE L1 -1724 783 652 7 1248 414 338 45 45 chr17 86969594 86969817 -8302834 - HAL1 LINE L1 -2171 336 114 7 1248 213 369 34 48 chr17 86970082 86970290 -8302361 + MIR SINE MIR 25 229 -33 7 1248 1037 267 119 18 chr17 86970368 86970704 -8301947 + MLT1B LTR MaLR 20 389 -1 7 1248 25 0 0 0 chr17 86971025 86971050 -8301601 + AT_rich Low_complexity Low_complexity 1 25 0 7 1248 1466 142 0 4 chr17 86971064 86971290 -8301361 - URR1A DNA MER1_type 0 226 2 7 1248 616 320 121 0 chr17 86971317 86971548 -8301103 - MER2 DNA MER2_type -1 344 86 7 1248 592 102 10 10 chr17 86971886 86971985 -8300666 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 7 1248 317 346 44 15 chr17 86972395 86972530 -8300121 + MIRb SINE MIR 117 255 -13 7 1248 478 323 62 70 chr17 86974726 86975161 -8297490 - L2c LINE L2 -10 3377 2936 7 1248 339 265 48 0 chr17 86975441 86975524 -8297127 - MER63D DNA AcHobo -665 396 310 7 1248 275 305 12 0 chr17 86975524 86975606 -8297045 - MER63D DNA AcHobo -978 83 1 7 1248 2129 72 31 10 chr17 86975908 86976201 -8296450 - ORR1A2 LTR MaLR 0 327 29 7 1248 541 162 52 0 chr17 86976289 86976443 -8296208 + GA-rich Low_complexity Low_complexity 1 162 0 7 1248 578 267 17 80 chr17 86976454 86976629 -8296022 + B4 SINE B4 95 258 -34 7 1248 394 266 43 0 chr17 86976652 86976746 -8295905 - ORR1E LTR MaLR -260 99 2 7 1248 2644 21 200 0 chr17 86976790 86977120 -8295531 + MTA_Mm LTR MaLR 1 396 0 7 1248 407 292 210 7 chr17 86977139 86977277 -8295374 - MLT1B LTR MaLR -2 465 300 7 1248 298 271 0 48 chr17 86977380 86977566 -8295085 + C-rich Low_complexity Low_complexity 3 179 0 7 1248 609 296 13 7 chr17 86977602 86977755 -8294896 - MLT1B LTR MaLR -236 154 1 7 1248 482 291 75 18 chr17 86977757 86977984 -8294667 - L1MC3 LINE L1 -1443 6342 6103 7 1248 1055 294 182 34 chr17 86977976 86978628 -8294023 - L1MC3 LINE L1 -1470 4676 3953 7 1248 318 26 0 0 chr17 86978628 86978667 -8293984 + (TTG)n Simple_repeat Simple_repeat 2 40 0 7 1248 1055 294 182 34 chr17 86978667 86978933 -8293718 - L1MC3 LINE L1 -2194 3952 3622 7 1248 458 258 106 0 chr17 86978952 86979084 -8293567 + B1F1 SINE Alu 3 148 -1 7 1248 291 289 58 15 chr17 86979108 86979245 -8293406 - L1MC3 LINE L1 -2662 3484 3342 7 1248 755 155 55 21 chr17 86979632 86979777 -8292874 + B1_Mur4 SINE Alu 1 150 0 7 1248 252 286 0 0 chr17 86979777 86979833 -8292818 + polypurine Low_complexity Low_complexity 3 58 0 7 1248 26 0 0 0 chr17 86979921 86979947 -8292704 + AT_rich Low_complexity Low_complexity 1 26 0 7 1248 757 151 70 28 chr17 86980905 86981048 -8291603 - B1_Mur3 SINE Alu 0 149 1 7 1248 246 308 15 30 chr17 86981098 86981165 -8291486 - B1F SINE Alu -79 70 5 8 1248 554 273 102 19 chr17 86981258 86981415 -8291236 + ID_B1 SINE B4 1 170 -54 8 1248 464 0 18 0 chr17 86981730 86981786 -8290865 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 1248 361 182 10 10 chr17 86982178 86982278 -8290373 + CT-rich Low_complexity Low_complexity 4 103 0 8 1248 427 297 172 44 chr17 86982325 86982815 -8289836 - Lx7 LINE L1 -6 7467 6880 8 1248 820 297 119 101 chr17 86982815 86983098 -8289553 - L1MC3 LINE L1 -2966 3180 2921 7 1248 4376 50 2 2 chr17 86983098 86983624 -8289027 - L1_Mus2 LINE L1 0 6566 6041 8 1248 820 297 119 101 chr17 86983624 86983962 -8288689 - L1MC3 LINE L1 -3226 2920 2548 7 1248 933 295 64 25 chr17 86984016 86984423 -8288228 - L1MB8 LINE L1 -26 6152 5730 8 1248 442 306 81 23 chr17 86984483 86984657 -8287994 - L1MB8 LINE L1 -572 5606 5423 8 1248 278 264 68 11 chr17 86984653 86984741 -8287910 - L1MC3 LINE L1 -3642 2504 2412 7 1248 1429 204 184 68 chr17 86984741 86984776 -8287875 - MT2A LTR ERVL 0 533 498 8 1248 351 0 0 0 chr17 86984776 86984815 -8287836 + (TA)n Simple_repeat Simple_repeat 1 39 0 8 1248 1429 204 184 68 chr17 86984815 86985253 -8287398 - MT2A LTR ERVL -36 497 6 8 1248 357 272 61 152 chr17 86985481 86985711 -8286940 - L1MC3 LINE L1 -3714 2432 2224 7 1248 254 263 12 62 chr17 86985774 86985855 -8286796 - Kanga1 DNA Tc2 -1661 84 8 8 1248 193 303 76 0 chr17 86985891 86985957 -8286694 + MIRc SINE MIR 163 233 -35 8 1248 278 325 81 19 chr17 86986176 86986336 -8286315 + MIRb SINE MIR 37 206 -62 8 1248 277 274 15 30 chr17 86987269 86987401 -8285250 + (TATATG)n Simple_repeat Simple_repeat 2 131 0 8 1248 282 29 0 0 chr17 86987490 86987525 -8285126 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 1248 342 0 0 0 chr17 86987581 86987619 -8285032 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 1248 361 307 83 45 chr17 86989492 86989649 -8283002 + RSINE1 SINE B4 3 165 0 8 1248 225 290 75 103 chr17 86989649 86989784 -8282867 - RLTR22_Mur LTR ERVK -409 1439 1307 8 1248 880 219 14 19 chr17 86990472 86990681 -8281970 + B3 SINE B2 2 209 -7 8 1248 358 276 63 24 chr17 86991444 86991570 -8281081 + RSINE1 SINE B4 11 141 -24 8 1248 260 282 63 13 chr17 86991710 86991789 -8280862 - B3A SINE B2 -115 83 1 8 1248 322 152 0 0 chr17 86991801 86991847 -8280804 - HAL1-3A_ME LINE L1 -835 2023 1978 8 1248 647 282 5 53 chr17 86991859 86992065 -8280586 - B3A SINE B2 -2 196 1 8 1248 206 22 85 21 chr17 86992104 86992151 -8280500 + (TTTTG)n Simple_repeat Simple_repeat 1 50 0 8 1248 504 0 0 0 chr17 86992866 86992922 -8279729 + (CA)n Simple_repeat Simple_repeat 2 57 0 8 1248 570 244 113 5 chr17 86993330 86993515 -8279136 + ID_B1 SINE B4 3 207 -17 8 1248 516 103 52 0 chr17 86994453 86994569 -8278082 + (TA)n Simple_repeat Simple_repeat 2 123 0 8 1248 468 231 8 17 chr17 86995387 86995506 -8277145 - PB1D9 SINE Alu 0 120 3 8 1248 764 211 134 21 chr17 86995551 86995745 -8276906 - B3 SINE B2 0 216 1 8 1248 803 157 181 53 chr17 86995897 86996101 -8276550 - B3 SINE B2 0 216 8 8 1248 585 119 0 0 chr17 86996101 86996202 -8276449 + (TC)n Simple_repeat Simple_repeat 2 102 0 8 1248 784 230 102 5 chr17 86997461 86997658 -8274993 - B3 SINE B2 0 216 1 8 1248 267 335 107 6 chr17 86997811 86997840 -8274811 + CYRA11_Mm Unknown Y-chromosome 204 334 -283 8 1248 689 140 199 0 chr17 86997840 86997976 -8274675 - URR1A DNA MER1_type -63 163 1 8 1248 267 335 107 6 chr17 86997976 86997988 -8274663 + CYRA11_Mm Unknown Y-chromosome 335 398 -219 8 1248 935 107 8 4 chr17 86998212 86998455 -8274196 + (CA)n Simple_repeat Simple_repeat 1 243 0 8 1248 1030 230 51 0 chr17 86998711 86998907 -8273744 + B3 SINE B2 6 211 -5 8 1248 1091 146 50 112 chr17 87001051 87001192 -8271459 - URR1B DNA MER1_type 0 225 79 1 1248 876 233 150 48 chr17 87001192 87001526 -8271125 - RLTR9A LTR ERVK 0 368 1 2 1248 1091 146 50 112 chr17 87001526 87001624 -8271027 - URR1B DNA MER1_type -147 78 1 1 1248 302 67 22 0 chr17 87001650 87001695 -8270956 + (TTAA)n Simple_repeat Simple_repeat 4 49 0 3 1248 276 30 0 0 chr17 87002544 87002577 -8270074 + (CAG)n Simple_repeat Simple_repeat 1 33 0 4 1248 868 131 17 11 chr17 87002577 87002754 -8269897 + GA-rich Low_complexity Low_complexity 2 179 0 5 1248 402 108 24 12 chr17 87002756 87002840 -8269811 + (GGA)n Simple_repeat Simple_repeat 1 85 0 6 1248 224 245 0 20 chr17 87003163 87003213 -8269438 + L2a LINE L2 3287 3335 -91 7 1248 203 311 0 32 chr17 87004772 87004835 -8267816 + C-rich Low_complexity Low_complexity 1 61 0 8 1248 478 271 72 72 chr17 87004902 87005069 -8267582 - RMER30 DNA MER1_type -1 201 35 9 1248 476 254 92 82 chr17 87004910 87005094 -8267557 + Charlie12 DNA MER1_type 9 194 -2679 1 1248 1202 198 0 0 chr17 87005466 87005673 -8266978 + B3 SINE B2 5 211 -5 1 1248 226 50 24 24 chr17 87006012 87006053 -8266598 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1 1248 549 0 0 0 chr17 87007178 87007239 -8265412 + (TC)n Simple_repeat Simple_repeat 1 61 0 1 1248 228 316 91 27 chr17 87008125 87008317 -8264334 - L2c LINE L2 -5 3421 3189 1 1248 752 309 19 172 chr17 87009435 87009650 -8263001 - B3A SINE B2 -9 184 3 1 1248 351 287 73 18 chr17 87010134 87010244 -8262407 + PB1 SINE Alu 5 120 -7 1 1248 571 159 38 7 chr17 87010371 87010481 -8262170 + B1_Mur3 SINE Alu 9 149 0 1 1248 345 197 0 0 chr17 87010488 87010559 -8262092 + (CAGA)n Simple_repeat Simple_repeat 2 72 0 1 1248 827 235 6 0 chr17 87010585 87010755 -8261896 + B3 SINE B2 43 213 -3 1 1248 472 263 260 45 chr17 87010778 87011001 -8261650 + B4A SINE B4 4 274 -18 2 1248 210 340 61 20 chr17 87012412 87012511 -8260140 - MIR SINE MIR -119 143 41 2 1248 478 307 72 6 chr17 87012843 87013010 -8259641 + B3A SINE B2 1 178 -20 2 1248 378 0 0 0 chr17 87013016 87013058 -8259593 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1248 810 146 0 111 chr17 87013081 87013243 -8259408 - B1_Mus1 SINE Alu -4 144 1 2 1248 936 172 7 0 chr17 87013283 87013428 -8259223 - B1_Mur1 SINE Alu -3 146 1 2 1248 340 314 113 7 chr17 87014169 87014310 -8258341 + MER20 DNA MER1_type 4 159 -60 2 1248 666 255 43 21 chr17 87014605 87014793 -8257858 - B3A SINE B2 -6 192 1 2 1248 317 274 129 59 chr17 87015427 87015700 -8256951 + L1MD LINE L1 4485 4776 -1370 2 1248 589 47 24 0 chr17 87016948 87017033 -8255618 + (CA)n Simple_repeat Simple_repeat 2 88 0 2 1248 214 338 0 0 chr17 87017412 87017492 -8255159 + GA-rich Low_complexity Low_complexity 4 83 0 3 1248 276 77 0 0 chr17 87020490 87020529 -8252122 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 3 1248 277 290 10 88 chr17 87020647 87020749 -8251902 + RSINE1 SINE B4 67 160 -5 3 1248 695 227 13 7 chr17 87020992 87021143 -8251508 + ID_B1 SINE B4 67 218 -6 3 1248 261 379 26 0 chr17 87022350 87022466 -8250185 + MIRc SINE MIR 119 237 -31 3 1248 702 252 0 0 chr17 87024024 87024163 -8248488 + B1_Mur1 SINE Alu 1 139 -10 3 1248 297 0 0 0 chr17 87024925 87024958 -8247693 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1248 537 125 0 0 chr17 87024971 87025059 -8247592 + (TCTG)n Simple_repeat Simple_repeat 4 91 0 3 1248 627 244 91 34 chr17 87025674 87025882 -8246769 + ID_B1 SINE B4 1 220 -4 3 1248 257 319 82 81 chr17 87026001 87026283 -8246368 - MER102c DNA MER1_type -32 298 1 3 1248 1264 72 9 6 chr17 87026857 87027210 -8245441 + (TG)n Simple_repeat Simple_repeat 1 354 0 4 1248 302 266 52 103 chr17 87027294 87027449 -8245202 + MER20 DNA MER1_type 29 175 -44 4 1248 650 293 41 7 chr17 87027484 87027695 -8244956 + B3A SINE B2 1 216 0 4 1248 419 0 20 0 chr17 87027696 87027747 -8244904 + (GA)n Simple_repeat Simple_repeat 1 52 0 4 1248 260 137 20 0 chr17 87028712 87028763 -8243888 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1248 317 211 0 50 chr17 87028795 87028855 -8243796 - RSINE1 SINE B4 -106 59 3 4 1248 324 373 0 0 chr17 87029087 87029197 -8243454 + MIR SINE MIR 51 160 -102 4 1249 429 109 0 0 chr17 87032267 87032331 -8240320 + (GA)n Simple_repeat Simple_repeat 1 64 0 4 1249 381 295 121 6 chr17 87034957 87035114 -8237537 + MIRb SINE MIR 4 178 -90 4 1249 358 274 108 39 chr17 87035696 87035717 -8236934 - ID_B1 SINE B4 -3 221 129 4 1249 363 274 147 28 chr17 87035717 87035783 -8236868 - B1F SINE Alu -26 123 48 5 1249 465 19 0 0 chr17 87035783 87035837 -8236814 + (TCCC)n Simple_repeat Simple_repeat 2 55 0 5 1249 358 274 108 39 chr17 87035837 87035878 -8236773 - ID_B1 SINE B4 -96 128 85 4 1249 740 342 64 4 chr17 87037682 87037949 -8234702 - B4 SINE B4 -1 291 9 5 1249 230 244 24 49 chr17 87038000 87038082 -8234569 - L1ME2 LINE L1 -228 5936 5857 5 1249 201 39 0 0 chr17 87039185 87039211 -8233440 + (CATA)n Simple_repeat Simple_repeat 1 26 0 5 1249 925 240 11 0 chr17 87039343 87039526 -8233125 - B3 SINE B2 -30 186 2 5 1249 205 310 59 52 chr17 87039691 87039827 -8232824 + MIRm SINE MIR 5 141 -135 5 1249 207 0 0 0 chr17 87040280 87040303 -8232348 + (CCA)n Simple_repeat Simple_repeat 2 24 0 5 1249 301 222 26 53 chr17 87041038 87041114 -8231537 - ID2 SINE ID -8 75 2 5 1249 547 311 28 28 chr17 87041274 87041456 -8231195 + MER58B DNA MER1_type 160 341 0 5 1249 403 185 155 129 chr17 87041578 87041733 -8230918 - MTEb LTR MaLR -178 201 43 6 1249 34 42 0 0 chr17 87042260 87042308 -8230343 + AT_rich Low_complexity Low_complexity 1 48 0 6 1249 275 244 7 144 chr17 87042442 87042458 -8230193 - YREP_Mm Unknown Unknown -1485 327 291 6 1249 456 241 0 33 chr17 87042458 87042548 -8230103 + ID_B1 SINE B4 82 168 -56 6 1249 275 244 7 144 chr17 87042548 87042581 -8230070 - YREP_Mm Unknown Unknown -1485 290 208 6 1249 484 259 78 149 chr17 87042561 87042870 -8229781 + B4 SINE B4 6 292 0 6 1249 274 253 22 11 chr17 87042886 87042978 -8229673 + (TA)n Simple_repeat Simple_repeat 2 94 0 6 1249 1156 81 0 0 chr17 87043031 87043179 -8229472 + B1_Mus1 SINE Alu 1 148 0 6 1249 467 255 57 6 chr17 87043719 87043877 -8228774 - Lx9 LINE L1 -10 7634 7469 6 1249 185 307 109 43 chr17 87044048 87044140 -8228511 - MIRc SINE MIR -68 200 103 6 1249 527 164 81 0 chr17 87044164 87044265 -8228386 + B3 SINE B2 1 110 -85 6 1249 924 152 57 0 chr17 87044270 87044428 -8228223 - URR1A DNA MER1_type -1 225 59 7 1249 591 53 0 0 chr17 87044563 87044638 -8228013 + (GAAAA)n Simple_repeat Simple_repeat 2 76 0 7 1249 279 228 136 25 chr17 87044821 87044902 -8227749 - MER5A DNA MER1_type -21 168 79 7 1249 420 111 0 0 chr17 87045054 87045117 -8227534 + (CA)n Simple_repeat Simple_repeat 1 63 0 7 1249 288 0 0 0 chr17 87045146 87045178 -8227473 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 1249 319 297 61 35 chr17 87045354 87045469 -8227182 + MER5B DNA MER1_type 61 178 0 7 1249 496 268 43 55 chr17 87045650 87045814 -8226837 - RSINE1 SINE B4 0 165 2 7 1249 640 149 329 18 chr17 87045853 87046017 -8226634 - B3 SINE B2 0 216 2 7 1249 243 0 0 0 chr17 87046121 87046148 -8226503 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 1249 1443 84 5 0 chr17 87046319 87046510 -8226141 - B2_Mm1a SINE B2 0 193 2 7 1249 1012 88 15 0 chr17 87046882 87047018 -8225633 + B1_Mus1 SINE Alu 10 147 -1 7 1249 192 135 0 0 chr17 87047019 87047056 -8225595 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 8 1249 1133 59 0 0 chr17 87047168 87047303 -8225348 + B1_Mus1 SINE Alu 4 138 -10 8 1249 486 0 0 0 chr17 87047303 87047357 -8225294 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 8 1249 24 32 0 0 chr17 87047387 87047418 -8225233 + AT_rich Low_complexity Low_complexity 1 31 0 8 1249 231 242 14 43 chr17 87049812 87049881 -8222770 + ID4 SINE ID 6 72 -11 8 1249 392 288 60 4 chr17 87051194 87051321 -8221330 + MIRc SINE MIR 41 163 -45 8 1249 2050 87 47 86 chr17 87051709 87051763 -8220888 - ORR1A3 LTR MaLR 0 326 278 8 1249 700 59 17 8 chr17 87051763 87051882 -8220769 - L1_Mus3 LINE L1 0 6638 6519 8 1249 2050 87 47 86 chr17 87051882 87052166 -8220485 - ORR1A3 LTR MaLR -49 277 1 8 1249 1388 148 8 47 chr17 87052718 87052952 -8219699 - URR1B DNA MER1_type 0 225 1 8 1249 184 244 21 43 chr17 87053163 87053210 -8219441 + MIRc SINE MIR 23 68 -200 8 1249 572 227 6 0 chr17 87053295 87053471 -8219180 + (CA)n Simple_repeat Simple_repeat 2 178 0 9 1249 339 211 0 0 chr17 87053498 87053593 -8219058 + (CA)n Simple_repeat Simple_repeat 1 95 0 9 1249 791 64 9 0 chr17 87054692 87054802 -8217849 + (GAAA)n Simple_repeat Simple_repeat 2 112 0 9 1249 369 174 0 0 chr17 87056290 87056359 -8216292 + CT-rich Low_complexity Low_complexity 2 70 0 9 1249 213 387 0 0 chr17 87056674 87056749 -8215902 + BC1_Mm scRNA scRNA 7 81 -71 9 1249 844 263 21 0 chr17 87057366 87057552 -8215099 + ID_B1 SINE B4 27 216 -8 9 1249 386 252 72 58 chr17 87057427 87057566 -8215085 + B1_Mur4 SINE Alu 9 149 -1 9 1249 444 205 16 0 chr17 87057594 87057693 -8214958 + PB1D10 SINE Alu 3 105 -42 9 1249 807 243 46 14 chr17 87058265 87058482 -8214169 + ID_B1 SINE B4 1 224 0 9 1249 953 57 0 0 chr17 87058793 87058916 -8213735 - B1_Mus1 SINE Alu -24 124 2 9 1249 652 223 14 117 chr17 87058916 87059017 -8213634 - ID SINE ID -144 80 3 9 1249 291 394 29 0 chr17 87059554 87059656 -8212995 + PB1D7 SINE Alu 4 108 -12 1 1249 723 242 8 0 chr17 87059656 87059788 -8212863 + B1_Mur4 SINE Alu 1 133 -17 1 1249 770 179 45 0 chr17 87061213 87061347 -8211304 + B1_Mur3 SINE Alu 1 140 -9 1 1249 527 266 54 8 chr17 87061404 87061533 -8211118 - RSINE1 SINE B4 -28 137 3 1 1249 8801 132 49 56 chr17 87062661 87064149 -8208502 + L1_Mur3 LINE L1 706 2081 -3799 1 1249 204 97 0 0 chr17 87064149 87064180 -8208471 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1 1249 8801 143 67 91 chr17 87064180 87065251 -8207400 + L1_Mur3 LINE L1 2082 3216 -2664 1 1249 1245 156 83 17 chr17 87065257 87065498 -8207153 - L1_Mur3 LINE L1 -3147 2733 2477 1 1249 993 232 58 8 chr17 87065512 87065773 -8206878 + L1_Mur3 LINE L1 3221 3494 -2386 1 1249 407 19 0 19 chr17 87065825 87065878 -8206773 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 1 1249 789 133 0 0 chr17 87065878 87065991 -8206660 - B1_Mus1 SINE Alu -13 135 23 1 1249 438 285 123 57 chr17 87066381 87066608 -8206043 - CYRA11_Mm Unknown Y-chromosome -204 413 172 1 1249 1035 192 83 5 chr17 87066405 87066609 -8206042 + URR1B DNA MER1_type 6 225 0 1 1249 498 261 35 35 chr17 87066793 87066936 -8205715 - MER115 DNA Tip100 -64 629 487 1 1249 297 0 0 0 chr17 87067104 87067137 -8205514 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1249 238 214 18 18 chr17 87067149 87067206 -8205445 + CT-rich Low_complexity Low_complexity 5 61 0 1 1249 359 188 0 0 chr17 87067207 87067276 -8205375 - B1_Mur2 SINE Alu -7 142 74 1 1249 252 282 87 0 chr17 87067279 87067382 -8205269 - L1M2 LINE L1 -702 5598 5487 1 1249 438 304 94 82 chr17 87067462 87067579 -8205072 - L1_Rod LINE L1 -439 5408 5301 1 1249 593 306 6 6 chr17 87067579 87067737 -8204914 - RSINE1 SINE B4 -6 159 2 1 1249 679 291 95 44 chr17 87067737 87068039 -8204612 - L1M2 LINE L1 -777 5366 5037 1 1249 1124 144 82 55 chr17 87068039 87068259 -8204392 - URR1A DNA MER1_type 0 226 1 1 1249 679 291 95 44 chr17 87068259 87068452 -8204199 - L1M2 LINE L1 -1107 5036 4846 1 1249 369 145 0 0 chr17 87068624 87068686 -8203965 + (TTTTC)n Simple_repeat Simple_repeat 2 63 0 1 1249 556 226 144 41 chr17 87068689 87068883 -8203768 - B3 SINE B2 -2 214 1 1 1249 211 324 0 0 chr17 87069044 87069115 -8203536 + GA-rich Low_complexity Low_complexity 2 72 0 1 1249 183 80 0 0 chr17 87070091 87070116 -8202535 + (GAAA)n Simple_repeat Simple_repeat 3 27 0 1 1249 315 0 0 0 chr17 87071796 87071831 -8200820 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 1249 450 0 0 0 chr17 87071831 87071880 -8200771 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1249 409 317 89 26 chr17 87071933 87072124 -8200527 - MLT1F2 LTR MaLR -225 335 133 1 1249 1197 101 0 0 chr17 87072238 87072417 -8200234 + (TTC)n Simple_repeat Simple_repeat 1 179 0 1 1249 316 179 13 13 chr17 87072418 87072444 -8200207 + polypyrimidine Low_complexity Low_complexity 55 80 0 1 1249 1046 140 6 0 chr17 87072444 87072623 -8200028 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1 1249 316 179 13 13 chr17 87072623 87072675 -8199976 + polypyrimidine Low_complexity Low_complexity 2 54 0 1 1249 574 147 15 8 chr17 87072696 87072826 -8199825 - L1_Mus4 LINE L1 -1 6635 6505 1 1249 2882 46 0 3 chr17 87072826 87073174 -8199477 + L1_Mus4 LINE L1 5645 5991 -645 1 1249 282 256 74 74 chr17 87073176 87073281 -8199370 + Charlie1a DNA MER1_type 1072 1184 -271 1 1249 1177 190 10 5 chr17 87073281 87073482 -8199169 + B3 SINE B2 1 202 -14 1 1249 282 256 74 74 chr17 87073482 87073511 -8199140 + Charlie1a DNA MER1_type 1185 1206 -249 1 1249 618 168 9 45 chr17 87074719 87074831 -8197820 - B1_Mur3 SINE Alu -6 143 36 1 1249 318 194 24 122 chr17 87074753 87074876 -8197775 - MT2B LTR ERVL -337 264 154 1 1249 236 344 64 50 chr17 87076848 87077050 -8195601 + L2 LINE L2 1311 1515 -1904 1 1249 348 291 197 0 chr17 87077183 87077300 -8195351 - ID_B1 SINE B4 -12 212 73 1 1249 684 117 5 233 chr17 87077390 87077579 -8195072 - B1_Mur3 SINE Alu -1 148 3 1 1249 207 0 0 0 chr17 87077586 87077609 -8195042 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 1 1249 691 194 194 0 chr17 87077612 87077777 -8194874 - B3A SINE B2 -1 197 1 1 1249 669 61 0 0 chr17 87078305 87078387 -8194264 - B2_Mm2 SINE B2 -113 82 1 1 1249 338 287 43 14 chr17 87078448 87078586 -8194065 + B1F1 SINE Alu 1 142 -7 1 1249 237 213 98 0 chr17 87078696 87078757 -8193894 - ID4_ SINE ID -16 67 1 1 1249 345 311 45 38 chr17 87078893 87079050 -8193601 + L1M5 LINE L1 3572 3729 -2417 1 1249 779 146 14 7 chr17 87079121 87079259 -8193392 + B1_Mus2 SINE Alu 9 147 0 1 1249 418 317 101 6 chr17 87079385 87079553 -8193098 - MER20 DNA MER1_type -4 215 32 1 1249 2309 124 31 8 chr17 87079667 87079683 -8192968 - ORR1B2 LTR MaLR 0 367 351 1 1249 225 65 0 0 chr17 87079683 87079714 -8192937 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1249 2309 124 31 8 chr17 87079714 87080056 -8192595 - ORR1B2 LTR MaLR -17 350 2 1 1249 329 275 67 47 chr17 87080566 87080715 -8191936 + RSINE1 SINE B4 13 164 -1 1 1249 464 348 71 43 chr17 87080786 87081137 -8191514 + L1M5 LINE L1 4023 4383 -1763 1 1249 515 271 45 0 chr17 87081142 87081275 -8191376 + ID_B1 SINE B4 86 224 0 1 1249 313 246 93 54 chr17 87081318 87081447 -8191204 + L1M5 LINE L1 4428 4561 -1585 1 1249 393 75 0 0 chr17 87081779 87081832 -8190819 + (TTCA)n Simple_repeat Simple_repeat 1 53 0 1 1249 664 200 24 0 chr17 87081840 87081965 -8190686 - RSINE1 SINE B4 -35 130 3 1 1249 1791 132 54 63 chr17 87082654 87082985 -8189666 - ORR1A4 LTR MaLR 0 329 2 1 1249 396 350 105 0 chr17 87083519 87083719 -8188932 + MER58A DNA MER1_type 4 224 0 1 1249 300 218 25 37 chr17 87084998 87085012 -8187639 + L1M5 LINE L1 3094 3106 -3040 1 1249 864 193 21 0 chr17 87085012 87085157 -8187494 + B1_Mur4 SINE Alu 3 150 0 1 1249 300 218 25 37 chr17 87085157 87085223 -8187428 + L1M5 LINE L1 3107 3173 -2973 1 1249 911 228 24 9 chr17 87085324 87085537 -8187114 - B3 SINE B2 0 216 1 1 1249 2166 100 20 62 chr17 87085537 87085878 -8186773 - ORR1A2 LTR MaLR 0 327 1 1 1249 263 272 63 140 chr17 87086043 87086393 -8186258 + HAL1 LINE L1 1296 1618 -889 1 1249 438 347 81 54 chr17 87086445 87086704 -8185947 + HAL1 LINE L1 1742 2007 -500 1 1249 2507 214 76 15 chr17 87086962 87087502 -8185149 + Lx5 LINE L1 6478 7050 0 1 1249 222 118 0 0 chr17 87087505 87087539 -8185112 + (GGAGAA)n Simple_repeat Simple_repeat 4 37 0 1 1249 369 0 0 0 chr17 87088228 87088269 -8184382 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1249 615 299 78 96 chr17 87088284 87088554 -8184097 - B4A SINE B4 -11 281 17 1 1249 384 119 0 33 chr17 87088644 87088705 -8183946 + B1_Mus2 SINE Alu 1 59 -88 1 1249 229 328 0 0 chr17 87088705 87088766 -8183885 + (CAGAGA)n Simple_repeat Simple_repeat 5 65 0 1 1249 514 191 10 17 chr17 87088798 87088910 -8183741 + B1_Mur4 SINE Alu 41 147 0 1 1249 937 177 58 42 chr17 87088992 87089181 -8183470 + B2_Mm2 SINE B2 1 192 -3 1 1249 24 67 0 0 chr17 87089343 87089388 -8183263 + AT_rich Low_complexity Low_complexity 1 45 0 1 1249 363 316 46 31 chr17 87089474 87089658 -8182993 + MIRc SINE MIR 35 219 -49 1 1249 600 110 11 0 chr17 87089961 87090052 -8182599 - B1_Mur4 SINE Alu -16 134 43 1 1249 224 0 0 157 chr17 87090055 87090163 -8182488 + (CTCTG)n Simple_repeat Simple_repeat 5 95 0 1 1249 313 183 0 32 chr17 87090164 87090226 -8182425 - B1_Mur4 SINE Alu -90 60 1 1 1249 1174 133 2 21 chr17 87090237 87090475 -8182176 - ORR1C1 LTR MaLR -67 327 1 1 1249 522 0 0 0 chr17 87091491 87091549 -8181102 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1249 691 208 96 18 chr17 87091610 87091864 -8180787 - L1M5 LINE L1 -675 5509 5239 1 1249 216 0 0 0 chr17 87091869 87091893 -8180758 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1249 762 84 0 0 chr17 87092858 87092965 -8179686 + (GGAA)n Simple_repeat Simple_repeat 2 108 0 1 1249 356 330 52 0 chr17 87093358 87093473 -8179178 - MTEa LTR MaLR -258 121 1 1 1249 448 336 67 36 chr17 87095702 87095927 -8176724 + RMER15 LTR ERVL 320 551 -24 1 1249 775 242 28 6 chr17 87096374 87096553 -8176098 + ID_B1 SINE B4 38 220 -4 1 1249 863 73 0 0 chr17 87096560 87096669 -8175982 + B2_Mm2 SINE B2 1 109 -86 1 1249 1516 194 18 17 chr17 87097572 87097897 -8174754 - MTC LTR MaLR -8 411 1 1 1249 1261 200 0 39 chr17 87098022 87098256 -8174395 + URR1B DNA MER1_type 1 225 0 1 1249 319 276 121 13 chr17 87099321 87099552 -8173099 + L1MB3 LINE L1 5905 6160 -23 1 1249 6431 65 22 5 chr17 87099756 87101345 -8171306 + L1VL2 LINE L1 229 1845 -1770 1 1249 287 326 0 0 chr17 87101472 87101561 -8171090 - PB1D10 SINE Alu -2 115 27 1 1249 21 57 0 0 chr17 87102416 87102451 -8170200 + AT_rich Low_complexity Low_complexity 1 35 0 1 1249 239 164 90 0 chr17 87102558 87102625 -8170026 + L1M2 LINE L1 2750 2822 -3321 1 1249 368 323 0 0 chr17 87102638 87102731 -8169920 - U6 snRNA snRNA -1 106 14 1 1249 900 277 55 46 chr17 87103100 87103566 -8169085 - L1M5 LINE L1 -391 5773 5283 1 1249 674 133 7 0 chr17 87103577 87103727 -8168924 + (TC)n Simple_repeat Simple_repeat 1 151 0 1 1249 459 35 0 0 chr17 87103727 87103784 -8168867 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1249 518 261 61 0 chr17 87103791 87103906 -8168745 - RSINE1 SINE B4 -29 136 15 1 1249 764 191 42 21 chr17 87104137 87104281 -8168370 + B1_Mur2 SINE Alu 1 147 -2 1 1249 200 132 26 26 chr17 87104986 87105025 -8167626 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 1 1249 264 173 19 19 chr17 87105027 87105080 -8167571 - ID4 SINE ID -28 55 3 1 1249 338 260 0 61 chr17 87105094 87105176 -8167475 - B1F SINE Alu -8 141 65 1 1249 392 82 16 0 chr17 87105488 87105549 -8167102 + (AGGGGG)n Simple_repeat Simple_repeat 6 67 0 1 1249 201 254 0 0 chr17 87106557 87106612 -8166039 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1249 210 325 35 46 chr17 87108054 87108141 -8164510 + PB1D9 SINE Alu 35 120 0 1 1249 610 292 130 36 chr17 87108360 87108623 -8164028 + L2 LINE L2 2161 2448 -971 2 1249 387 0 0 0 chr17 87108623 87108666 -8163985 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1249 610 292 130 36 chr17 87108666 87108817 -8163834 + L2 LINE L2 2449 2613 -806 2 1249 1202 181 18 26 chr17 87109406 87109633 -8163018 - URR1B DNA MER1_type 0 225 1 2 1249 562 229 101 60 chr17 87110345 87110494 -8162157 + RSINE1 SINE B4 11 165 0 2 1249 704 183 41 34 chr17 87110522 87110669 -8161982 - B1_Mus1 SINE Alu 0 148 1 2 1249 1007 245 39 0 chr17 87110796 87111004 -8161647 + ID_B1 SINE B4 2 217 -7 2 1249 284 228 24 48 chr17 87111020 87111103 -8161548 + MER5B DNA MER1_type 73 153 -25 2 1249 459 229 50 17 chr17 87111959 87112079 -8160572 - B1_Mur4 SINE Alu 0 150 27 2 1249 445 296 92 29 chr17 87112076 87112292 -8160359 - B3A SINE B2 -1 215 1 2 1249 315 342 83 47 chr17 87112300 87112469 -8160182 - L1M5 LINE L1 -287 5837 5663 2 1249 351 314 159 21 chr17 87112547 87112736 -8159915 - L1MB5 LINE L1 -2 6172 5958 2 1249 588 29 0 0 chr17 87112792 87112862 -8159789 + (TC)n Simple_repeat Simple_repeat 2 71 0 2 1249 441 0 0 0 chr17 87112862 87112910 -8159741 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1249 354 187 53 42 chr17 87112911 87113006 -8159645 - B1_Mur4 SINE Alu -8 142 47 2 1249 1242 94 60 11 chr17 87113455 87113637 -8159014 + B2_Mm2 SINE B2 1 191 -4 2 1249 186 189 0 0 chr17 87113964 87114001 -8158650 + CT-rich Low_complexity Low_complexity 1 37 0 2 1249 233 247 48 72 chr17 87114219 87114302 -8158349 - MIR3 SINE MIR -25 183 103 2 1249 500 139 14 3 chr17 87114902 87114987 -8157664 - B1_Mus2 SINE Alu -62 85 3 2 1249 1083 69 0 0 chr17 87115049 87115194 -8157457 + (TG)n Simple_repeat Simple_repeat 1 145 0 2 1249 234 399 0 14 chr17 87116231 87116376 -8156275 + MIRc SINE MIR 47 189 -79 2 1249 1330 240 142 0 chr17 87116631 87116998 -8155653 - MTD LTR MaLR 0 419 1 2 1249 376 167 17 0 chr17 87117411 87117531 -8155120 + (TTG)n Simple_repeat Simple_repeat 2 123 0 2 1249 851 153 28 0 chr17 87117560 87117704 -8154947 - B1_Mus1 SINE Alu 0 148 1 2 1249 439 314 260 20 chr17 87118759 87118900 -8153751 - L2 LINE L2 -415 3004 2838 2 1249 369 0 0 0 chr17 87118900 87118941 -8153710 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1249 439 314 260 20 chr17 87118941 87119357 -8153294 - L2 LINE L2 -582 2837 2313 2 1249 1146 130 0 0 chr17 87119556 87119910 -8152741 + (CA)n Simple_repeat Simple_repeat 1 354 0 2 1249 364 349 34 49 chr17 87119917 87120122 -8152529 + MIRb SINE MIR 27 228 -40 2 1249 259 286 126 15 chr17 87120511 87120759 -8151892 + L1M5 LINE L1 5398 5677 -682 2 1249 619 228 65 80 chr17 87120772 87120972 -8151679 + B3A SINE B2 2 198 0 2 1249 237 295 169 44 chr17 87121004 87121252 -8151399 + L1MC4a LINE L1 5695 5973 -371 2 1249 390 311 146 24 chr17 87121404 87121780 -8150871 + L1MC4a LINE L1 6174 6595 -1287 2 1249 411 250 128 7 chr17 87121785 87121934 -8150717 - L1MB4 LINE L1 -7 6173 6007 2 1249 257 154 220 0 chr17 87121988 87122079 -8150572 - Lx9 LINE L1 0 7644 7534 2 1249 582 86 0 0 chr17 87122079 87122160 -8150491 + (TG)n Simple_repeat Simple_repeat 2 82 0 2 1249 1031 258 116 13 chr17 87122165 87122546 -8150105 - Lx9 LINE L1 -219 7425 7006 2 1249 219 69 0 0 chr17 87122692 87122721 -8149930 + (T)n Simple_repeat Simple_repeat 1 29 0 2 1249 233 301 14 14 chr17 87122818 87122892 -8149759 + B3A SINE B2 7 80 -118 2 1249 225 333 12 36 chr17 87122824 87122908 -8149743 + RSINE1 SINE B4 15 96 -69 2 1249 246 269 15 0 chr17 87123002 87123069 -8149582 + L1MB2 LINE L1 6091 6158 -13 2 1249 301 170 75 0 chr17 87123714 87123820 -8148831 + (TGGG)n Simple_repeat Simple_repeat 1 114 0 2 1249 231 36 0 0 chr17 87123941 87123969 -8148682 + (TA)n Simple_repeat Simple_repeat 1 28 0 2 1249 240 290 16 0 chr17 87124107 87124169 -8148482 + MER2 DNA MER2_type 281 343 -2 2 1249 212 211 0 37 chr17 87124229 87124283 -8148368 + C-rich Low_complexity Low_complexity 3 54 0 2 1249 418 276 118 0 chr17 87124784 87124911 -8147740 - ID_B1 SINE B4 -5 219 78 2 1249 540 234 125 0 chr17 87124928 87125056 -8147595 - B1F SINE Alu 0 149 6 2 1249 1057 244 167 4 chr17 87125112 87125363 -8147288 + B4A SINE B4 1 292 0 2 1249 258 32 0 0 chr17 87125400 87125431 -8147220 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1249 356 239 11 11 chr17 87125441 87125530 -8147121 + PB1D10 SINE Alu 29 117 0 2 1249 441 0 0 0 chr17 87128123 87128172 -8144479 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 1249 935 82 23 12 chr17 87128593 87128766 -8143885 + (TAGA)n Simple_repeat Simple_repeat 4 178 0 2 1249 530 211 100 15 chr17 87128812 87128942 -8143709 - B1F SINE Alu -8 141 1 2 1249 215 56 56 0 chr17 87129387 87129423 -8143228 + (TCTCTG)n Simple_repeat Simple_repeat 3 40 0 2 1249 550 352 45 15 chr17 87129554 87129753 -8142898 - ID_B1 SINE B4 -13 211 7 2 1249 415 272 136 82 chr17 87130301 87130485 -8142166 + B3A SINE B2 1 194 -4 2 1249 505 293 108 60 chr17 87130721 87130906 -8141745 - B3A SINE B2 0 195 2 2 1249 650 144 102 23 chr17 87130984 87131112 -8141539 - B1_Mur3 SINE Alu 0 149 12 2 1249 401 235 32 65 chr17 87131022 87131145 -8141506 - MT2B LTR ERVL -337 264 146 2 1249 21 0 0 0 chr17 87131230 87131251 -8141400 + AT_rich Low_complexity Low_complexity 1 21 0 2 1249 321 131 0 0 chr17 87131880 87131941 -8140710 + (TTCA)n Simple_repeat Simple_repeat 1 61 0 2 1249 1286 103 17 0 chr17 87132327 87132501 -8140150 + B2_Mm2 SINE B2 2 178 -17 2 1249 355 292 0 14 chr17 87134542 87134659 -8137992 - MIRb SINE MIR -7 255 142 2 1249 444 19 0 0 chr17 87134829 87134882 -8137769 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1249 295 247 52 0 chr17 87135592 87135689 -8136962 + L1MA6 LINE L1 6125 6226 -74 2 1249 301 200 0 18 chr17 87135793 87135849 -8136802 - L1ME4a LINE L1 -1 6123 6069 2 1249 189 0 0 0 chr17 87135934 87135955 -8136696 + (TG)n Simple_repeat Simple_repeat 1 21 0 2 1249 226 333 95 0 chr17 87136006 87136069 -8136582 - B3A SINE B2 -16 182 114 2 1249 392 299 19 77 chr17 87136014 87136170 -8136481 - B4A SINE B4 0 292 146 2 1249 543 266 0 14 chr17 87136486 87136627 -8136024 - L1M5 LINE L1 -420 5704 5566 2 1249 387 200 16 134 chr17 87136692 87136819 -8135832 + MT2B LTR ERVL 153 264 -337 2 1249 827 152 16 0 chr17 87136715 87136840 -8135811 + B1_Mur4 SINE Alu 12 138 -12 2 1249 287 25 25 0 chr17 87136840 87136880 -8135771 + (CAAAA)n Simple_repeat Simple_repeat 3 43 0 2 1249 198 0 0 0 chr17 87136885 87136907 -8135744 + (CAAA)n Simple_repeat Simple_repeat 1 22 0 2 1249 1033 216 30 0 chr17 87137165 87137364 -8135287 - B3 SINE B2 -11 205 1 2 1249 236 172 0 17 chr17 87137545 87137604 -8135047 + GA-rich Low_complexity Low_complexity 2 59 0 2 1249 579 255 27 33 chr17 87138624 87138774 -8133877 + RSINE1 SINE B4 5 153 -12 2 1249 1138 75 7 0 chr17 87138822 87138968 -8133683 + B1_Mus2 SINE Alu 1 147 0 2 1249 381 296 72 108 chr17 87139020 87139248 -8133403 + L1MEc LINE L1 1879 2101 -4299 2 1249 430 340 119 12 chr17 87139248 87139501 -8133150 - B4A SINE B4 -12 280 1 2 1249 381 296 72 108 chr17 87139501 87139688 -8132963 + L1MEc LINE L1 2102 2279 -4121 2 1249 256 315 109 57 chr17 87140281 87140510 -8132141 - L2b LINE L2 0 3375 3135 2 1249 312 361 0 0 chr17 87141865 87141962 -8130689 - MIRb SINE MIR -80 188 92 2 1249 3091 38 58 13 chr17 87142289 87142667 -8129984 + MTA_Mm LTR MaLR 2 396 0 2 1249 598 276 41 18 chr17 87143353 87143571 -8129080 - ID_B1 SINE B4 -1 223 1 2 1249 617 260 0 14 chr17 87143618 87143766 -8128885 - B1_Mur1 SINE Alu -1 148 3 2 1249 255 61 0 0 chr17 87143825 87143858 -8128793 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 1249 287 260 53 88 chr17 87143920 87144034 -8128617 + PB1D7 SINE Alu 10 119 -1 2 1249 302 296 30 101 chr17 87145554 87145723 -8126928 + L2c LINE L2 3057 3213 -174 2 1249 1204 55 7 0 chr17 87145727 87145873 -8126778 - B1_Mus2 SINE Alu 0 147 1 2 1249 2850 39 0 0 chr17 87146432 87146768 -8125883 + L1_Mus1 LINE L1 6232 6567 0 2 1249 805 242 102 0 chr17 87147044 87147230 -8125421 + URR1A DNA MER1_type 22 226 0 2 1249 305 371 60 6 chr17 87147230 87147398 -8125253 + LTR16A LTR ERVL 270 446 -5 2 1249 396 307 63 96 chr17 87148146 87148180 -8124471 - MTD LTR MaLR 0 379 349 2 1249 225 0 0 0 chr17 87148180 87148205 -8124446 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1249 1832 204 40 21 chr17 87148205 87148585 -8124066 - MTD LTR MaLR -31 388 2 2 1249 384 22 0 0 chr17 87149259 87149304 -8123347 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1249 954 215 212 84 chr17 87149305 87149625 -8123026 - MTEa LTR MaLR -11 368 8 2 1249 903 161 0 0 chr17 87150170 87150313 -8122338 - B1_Mur4 SINE Alu -6 144 2 2 1249 226 195 0 0 chr17 87150867 87150908 -8121743 - B1_Mm SINE Alu -18 129 89 2 1249 180 0 0 0 chr17 87150908 87150928 -8121723 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1249 349 273 111 0 chr17 87150971 87151070 -8121581 + RLTR12B LTR ERVK 47 156 -372 2 1249 375 240 0 0 chr17 87151074 87151149 -8121502 - B1_Mus2 SINE Alu -71 76 2 2 1249 387 0 0 0 chr17 87151399 87151442 -8121209 + (TCCC)n Simple_repeat Simple_repeat 2 44 0 2 1249 22 0 0 0 chr17 87152926 87152948 -8119703 + GC_rich Low_complexity Low_complexity 1 22 0 2 1249 291 114 0 0 chr17 87153202 87153246 -8119405 + (T)n Simple_repeat Simple_repeat 1 44 0 2 1249 246 189 0 75 chr17 87153355 87153435 -8119216 + CT-rich Low_complexity Low_complexity 1 74 0 3 1249 200 200 25 0 chr17 87154978 87155018 -8117633 + GA-rich Low_complexity Low_complexity 2 42 0 3 1249 180 0 0 0 chr17 87155451 87155471 -8117180 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 1249 232 226 95 16 chr17 87155628 87155691 -8116960 - MLT1H1 LTR MaLR -327 228 161 3 1249 327 285 44 51 chr17 87156377 87156514 -8116137 - L1MD LINE L1 -2959 3187 3052 3 1249 195 26 103 0 chr17 87156669 87156708 -8115943 + (CACCC)n Simple_repeat Simple_repeat 4 46 0 3 1249 191 88 29 0 chr17 87156759 87156793 -8115858 + (CCA)n Simple_repeat Simple_repeat 1 35 0 3 1249 1405 79 11 5 chr17 87158098 87158289 -8114362 - B2_Mm1t SINE B2 0 193 2 3 1249 330 273 0 106 chr17 87158520 87158643 -8114008 - BC1_Mm scRNA scRNA -40 112 3 3 1249 576 266 153 20 chr17 87158919 87159122 -8113529 - MIR SINE MIR -19 243 14 3 1249 23 0 0 0 chr17 87159334 87159357 -8113294 + AT_rich Low_complexity Low_complexity 1 23 0 3 1249 477 50 0 0 chr17 87159725 87159785 -8112866 + (GGGTG)n Simple_repeat Simple_repeat 3 62 0 3 1249 369 0 0 0 chr17 87160229 87160270 -8112381 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1249 466 278 103 7 chr17 87160270 87160415 -8112236 + B3A SINE B2 13 171 -27 3 1249 279 0 0 0 chr17 87160424 87160455 -8112196 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1249 357 24 0 0 chr17 87160652 87160694 -8111957 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1249 279 0 0 0 chr17 87161473 87161504 -8111147 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 1249 234 0 0 0 chr17 87161857 87161883 -8110768 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 1250 1289 27 0 7 chr17 87163222 87163371 -8109280 - B1_Mus1 SINE Alu 0 148 1 3 1250 709 244 83 22 chr17 87165877 87166057 -8106594 - B3 SINE B2 -20 196 6 3 1250 234 91 0 0 chr17 87166108 87166141 -8106510 + (CAAA)n Simple_repeat Simple_repeat 3 35 0 3 1250 277 321 71 78 chr17 87167436 87167740 -8104911 + L2b LINE L2 3072 3370 -5 3 1250 37 39 0 0 chr17 87169792 87169843 -8102808 + AT_rich Low_complexity Low_complexity 1 51 0 3 1250 347 192 0 64 chr17 87170708 87170786 -8101865 - ID4 SINE ID -9 74 2 3 1250 414 0 0 0 chr17 87170791 87170837 -8101814 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1250 220 152 68 0 chr17 87170855 87170914 -8101737 + (TA)n Simple_repeat Simple_repeat 2 64 0 3 1250 869 257 28 37 chr17 87172093 87172311 -8100340 - ID_B1 SINE B4 -2 222 7 3 1250 279 291 0 4 chr17 87172478 87172554 -8100097 - MER5A1 DNA MER1_type -87 79 9 3 1250 328 248 16 13 chr17 87173721 87173797 -8098854 + ID4 SINE ID 1 72 -11 3 1250 216 67 0 0 chr17 87173837 87173867 -8098784 + (TGG)n Simple_repeat Simple_repeat 3 32 0 3 1250 283 254 16 0 chr17 87174226 87174289 -8098362 - ID4 SINE ID -11 72 9 3 1250 1176 62 7 0 chr17 87174321 87174466 -8098185 - B1_Mus2 SINE Alu 0 147 2 3 1250 318 335 26 57 chr17 87176554 87176747 -8095904 + MIR3 SINE MIR 21 207 -1 3 1250 1186 68 7 0 chr17 87176907 87177053 -8095598 + B1_Mus2 SINE Alu 1 147 0 3 1250 212 59 0 29 chr17 87177056 87177091 -8095560 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 1250 970 237 34 10 chr17 87177121 87177330 -8095321 + B3 SINE B2 3 216 0 3 1250 366 233 0 0 chr17 87178130 87178263 -8094388 + (CA)n Simple_repeat Simple_repeat 1 133 0 3 1250 403 302 0 22 chr17 87178298 87178481 -8094170 + (CA)n Simple_repeat Simple_repeat 1 179 0 3 1250 504 45 0 0 chr17 87178504 87178571 -8094080 + (CA)n Simple_repeat Simple_repeat 1 67 0 3 1250 204 298 53 0 chr17 87180659 87180716 -8091935 - MIR SINE MIR -8 254 195 3 1250 511 269 8 25 chr17 87181089 87181211 -8091440 - RSINE1 SINE B4 -24 141 22 3 1250 327 49 0 0 chr17 87182838 87182879 -8089772 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1250 584 284 101 5 chr17 87184175 87184373 -8088278 - ID_B1 SINE B4 -1 223 7 3 1250 201 225 0 0 chr17 87184638 87184678 -8087973 + CT-rich Low_complexity Low_complexity 3 42 0 3 1250 418 272 23 31 chr17 87185853 87185982 -8086669 + MER5A1 DNA MER1_type 2 129 -37 3 1250 201 296 0 0 chr17 87187002 87187046 -8085605 + polypyrimidine Low_complexity Low_complexity 4 47 0 3 1250 266 286 118 22 chr17 87188425 87188561 -8084090 + MIRc SINE MIR 114 262 -6 3 1250 355 324 34 40 chr17 87188595 87188743 -8083908 - MLT1A0 LTR MaLR -9 356 210 3 1250 424 354 52 81 chr17 87189579 87189960 -8082691 - MARNA DNA Mariner -169 417 48 3 1250 829 148 20 40 chr17 87190454 87190602 -8082049 + B1_Mm SINE Alu 3 147 0 3 1250 1129 44 0 28 chr17 87190735 87190876 -8081775 - B1_Mus1 SINE Alu -10 138 2 3 1250 841 230 58 29 chr17 87191049 87191255 -8081396 - B3 SINE B2 -2 214 3 3 1250 845 267 108 0 chr17 87191657 87191915 -8080736 + MER2 DNA MER2_type 22 307 -38 3 1250 225 288 33 90 chr17 87192639 87192761 -8079890 - MER97c DNA MER1_type? -370 720 606 3 1250 207 365 16 0 chr17 87193450 87193513 -8079138 - MIRm SINE MIR -97 179 116 3 1250 291 328 11 0 chr17 87193898 87194005 -8078646 + MIRc SINE MIR 59 166 -110 3 1250 269 343 65 14 chr17 87194057 87194196 -8078455 + MIRb SINE MIR 84 229 -39 3 1250 486 286 78 40 chr17 87195283 87195488 -8077163 + MIR SINE MIR 12 234 -34 3 1250 628 250 13 34 chr17 87196766 87196915 -8075736 - RSINE1 SINE B4 -19 146 1 3 1250 312 27 0 0 chr17 87198241 87198278 -8074373 + (A)n Simple_repeat Simple_repeat 1 37 0 3 1250 675 332 68 15 chr17 87198912 87199178 -8073473 - B4A SINE B4 -1 291 12 3 1250 406 312 45 30 chr17 87199219 87199351 -8073300 - RSINE1 SINE B4 -31 134 1 3 1250 248 0 31 0 chr17 87199402 87199434 -8073217 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 1250 876 54 0 9 chr17 87199434 87199547 -8073104 - B1_Mus1 SINE Alu -9 139 28 3 1250 243 0 0 0 chr17 87199548 87199575 -8073076 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1250 239 309 14 56 chr17 87202782 87202854 -8069797 + MER45A DNA Tip100 110 178 0 3 1250 707 188 0 0 chr17 87202884 87203001 -8069650 - B1_Mur1 SINE Alu -32 117 1 3 1250 909 170 7 6 chr17 87203511 87203703 -8068948 - L1_Mm LINE L1 -1253 4630 4433 3 1250 245 264 279 42 chr17 87205481 87205671 -8066980 - MLT1G1 LTR MaLR -5 574 340 3 1250 592 289 58 33 chr17 87205977 87206176 -8066475 + B3A SINE B2 1 186 -9 3 1250 528 56 0 0 chr17 87207883 87207955 -8064696 + (TG)n Simple_repeat Simple_repeat 2 73 0 3 1250 324 0 0 0 chr17 87210532 87210568 -8062083 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1250 357 82 0 0 chr17 87210569 87210618 -8062033 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 1250 180 152 0 0 chr17 87210871 87210904 -8061747 + (TA)n Simple_repeat Simple_repeat 2 34 0 3 1250 291 196 0 18 chr17 87211274 87211331 -8061320 - B1F SINE Alu -66 83 28 3 1250 331 267 171 52 chr17 87211880 87212054 -8060597 + B3A SINE B2 9 186 -30 3 1250 462 259 33 33 chr17 87212190 87212310 -8060341 + RSINE1 SINE B4 3 122 -43 3 1250 261 0 0 0 chr17 87212310 87212339 -8060312 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 1250 571 331 6 6 chr17 87213658 87213819 -8058832 - B4A SINE B4 -3 289 129 3 1250 416 248 149 19 chr17 87213899 87214006 -8058645 - B4A SINE B4 -166 126 6 3 1250 5852 45 36 7 chr17 87216823 87217546 -8055105 - L1Md_F2 LINE L1 -12 6570 5827 3 1250 254 269 112 9 chr17 87218329 87218445 -8054206 + MER3 DNA MER1_type 75 202 -7 3 1250 465 103 0 0 chr17 87218976 87219044 -8053607 + (GGGA)n Simple_repeat Simple_repeat 1 68 0 3 1250 301 316 124 58 chr17 87220697 87220922 -8051729 + L1MC LINE L1 5551 5790 -543 3 1250 266 281 0 0 chr17 87221154 87221218 -8051433 + L1ME1 LINE L1 6065 6128 -51 3 1250 186 0 154 0 chr17 87221233 87221272 -8051379 + (TTAA)n Simple_repeat Simple_repeat 1 45 0 3 1250 300 308 0 158 chr17 87222473 87222600 -8050051 + PB1 SINE Alu 1 107 -20 3 1250 785 186 146 54 chr17 87225424 87225629 -8047022 + URR1B DNA MER1_type 2 225 0 3 1250 208 279 132 48 chr17 87225639 87225722 -8046929 - MIRc SINE MIR -51 157 68 3 1250 207 211 0 0 chr17 87226308 87226346 -8046305 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1250 1026 140 0 0 chr17 87230909 87231147 -8041504 + (CA)n Simple_repeat Simple_repeat 1 238 0 3 1250 216 0 0 0 chr17 87231161 87231185 -8041466 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1250 872 240 36 15 chr17 87233541 87233736 -8038915 + B3 SINE B2 15 213 -3 3 1250 1084 205 25 10 chr17 87235350 87235552 -8037099 + B3 SINE B2 10 214 -2 3 1250 459 0 0 0 chr17 87235699 87235750 -8036901 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 1250 810 103 0 0 chr17 87235783 87235899 -8036752 - B1_Mur4 SINE Alu 0 150 35 3 1250 473 322 78 0 chr17 87235905 87236160 -8036491 - L1MC3 LINE L1 -314 7471 7197 3 1250 1255 47 0 0 chr17 87236244 87236392 -8036259 + B1_Mus1 SINE Alu 1 148 0 3 1250 570 269 0 113 chr17 87236763 87236931 -8035720 + RSINE1 SINE B4 1 149 -16 3 1250 1207 48 7 0 chr17 87236969 87237116 -8035535 + B1_Mus1 SINE Alu 1 148 0 3 1250 985 119 14 14 chr17 87237202 87237347 -8035304 + B1_Mus2 SINE Alu 2 146 -1 3 1250 315 161 0 0 chr17 87237536 87237592 -8035059 + GA-rich Low_complexity Low_complexity 4 59 0 3 1250 265 334 133 34 chr17 87237646 87238030 -8034621 + L1ME1 LINE L1 5637 6058 -121 3 1250 239 305 132 32 chr17 87238251 87238471 -8034180 - L2 LINE L2 -2986 433 192 3 1250 540 0 0 0 chr17 87238513 87238573 -8034078 + (GA)n Simple_repeat Simple_repeat 2 61 0 4 1250 373 367 38 28 chr17 87239230 87239443 -8033208 + L3 LINE CR1 3931 4145 -344 4 1250 281 362 64 15 chr17 87240090 87240418 -8032233 + L1MC3 LINE L1 7310 7653 -132 4 1250 700 322 19 15 chr17 87240724 87240929 -8031722 + B3 SINE B2 7 212 -4 4 1250 256 289 49 19 chr17 87241001 87241163 -8031488 + L1MEg LINE L1 1838 2004 -4238 4 1250 302 356 118 10 chr17 87241251 87241455 -8031196 + L1MEg LINE L1 2134 2359 -3787 4 1250 270 164 0 22 chr17 87241735 87241790 -8030861 - ID4 SINE ID -4 79 26 4 1250 281 264 14 0 chr17 87241832 87241904 -8030747 + L1MEg LINE L1 2510 2582 -3564 4 1250 1485 250 153 17 chr17 87241954 87242754 -8029897 + L1MB7 LINE L1 5225 6150 -30 4 1250 4442 107 25 19 chr17 87242798 87243510 -8029141 + Lx LINE L1 384 1165 -2750 4 1250 501 47 0 0 chr17 87243510 87243574 -8029077 + (TC)n Simple_repeat Simple_repeat 2 65 0 4 1250 24076 162 15 85 chr17 87243574 87245075 -8027576 + Lx LINE L1 1099 2596 -3281 4 1250 1186 65 18 6 chr17 87245075 87245245 -8027406 + L1_Mus3 LINE L1 6465 6636 -2 4 1250 24076 158 8 85 chr17 87245245 87245564 -8027087 + Lx LINE L1 2597 2597 -3280 4 1250 687 57 0 0 chr17 87245564 87245652 -8026999 + (GAA)n Simple_repeat Simple_repeat 1 88 0 4 1250 24076 158 8 85 chr17 87245652 87246922 -8025729 + Lx LINE L1 2597 3822 -2055 4 1250 1270 34 0 0 chr17 87246922 87247069 -8025582 + B1_Mm SINE Alu 1 147 0 4 1250 24076 146 8 65 chr17 87247069 87249943 -8022708 + Lx LINE L1 3823 6654 0 4 1250 338 217 0 14 chr17 87249968 87250038 -8022613 - ID_B1 SINE B4 -8 216 148 4 1250 312 330 57 2 chr17 87250087 87250295 -8022356 + L1M5 LINE L1 2656 2874 -3272 4 1250 341 136 0 15 chr17 87250498 87250565 -8022086 + GA-rich Low_complexity Low_complexity 1 66 0 4 1250 283 247 26 13 chr17 87250565 87250643 -8022008 + PB1D7 SINE Alu 41 119 -1 4 1250 1042 80 7 0 chr17 87250648 87250785 -8021866 + B1_Mus2 SINE Alu 1 138 -9 4 1250 204 240 0 0 chr17 87250802 87250852 -8021799 + A-rich Low_complexity Low_complexity 1 50 0 4 1250 236 259 62 0 chr17 87250912 87250993 -8021658 + L1M5 LINE L1 3163 3248 -2898 4 1250 195 42 0 0 chr17 87251143 87251167 -8021484 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1250 817 162 18 0 chr17 87251169 87251336 -8021315 + GA-rich Low_complexity Low_complexity 3 172 0 4 1250 551 266 29 9 chr17 87251341 87251506 -8021145 - B3A SINE B2 -48 168 1 4 1250 301 294 111 6 chr17 87251509 87251690 -8020961 + L1M5 LINE L1 3479 3678 -2468 4 1250 629 254 109 11 chr17 87252105 87252288 -8020363 - MER21B LTR ERV1 -77 786 586 4 1250 1086 311 87 11 chr17 87252320 87252690 -8019961 - MER21B LTR ERV1 -461 402 5 4 1250 252 266 114 51 chr17 87252763 87252924 -8019727 + L1M5 LINE L1 4217 4382 -1764 4 1250 1150 75 7 0 chr17 87252924 87253071 -8019580 - B1_Mus1 SINE Alu 0 148 1 4 1250 252 266 114 51 chr17 87253071 87253242 -8019409 + L1M5 LINE L1 4383 4569 -1577 4 1250 360 0 0 0 chr17 87253267 87253307 -8019344 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1250 413 328 25 0 chr17 87253417 87253536 -8019115 + B4A SINE B4 3 124 -168 4 1250 355 229 83 70 chr17 87253554 87253654 -8018997 + RSINE1 SINE B4 78 164 -1 4 1250 389 308 115 14 chr17 87253672 87253889 -8018762 + L1M5 LINE L1 4746 4984 -1162 4 1250 319 217 142 42 chr17 87253998 87254118 -8018533 + L1M5 LINE L1 5208 5339 -807 4 1250 754 222 0 20 chr17 87254143 87254290 -8018361 + B1_Mur2 SINE Alu 4 147 -2 4 1250 432 0 0 0 chr17 87254474 87254522 -8018129 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1250 904 272 34 0 chr17 87254523 87254729 -8017922 - B4A SINE B4 -20 272 60 4 1250 992 224 160 106 chr17 87254740 87254820 -8017831 - RMER4B LTR ERVK -9 576 506 4 1250 414 57 0 0 chr17 87254820 87254873 -8017778 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 1250 992 224 160 106 chr17 87254873 87255322 -8017329 - RMER4B LTR ERVK -80 505 18 4 1250 3849 241 66 46 chr17 87255334 87256551 -8016100 - MYSERV-int LTR ERVK -3 6547 5307 4 1250 493 270 24 0 chr17 87256613 87256739 -8015912 - MurERV4-int LTR ERVK -3558 1702 1574 4 1250 3822 30 5 0 chr17 87256952 87257386 -8015265 - RLTR10C LTR ERVK 0 436 1 4 1250 210 246 17 17 chr17 87258571 87258629 -8014022 + MIRb SINE MIR 210 267 -1 4 1250 2497 186 35 10 chr17 87258942 87259435 -8013216 - RLTR16 LTR ERVK 0 505 1 4 1250 228 307 26 13 chr17 87259512 87259588 -8013063 + LTR28 LTR ERV1 127 203 -817 4 1250 998 258 29 0 chr17 87259764 87259973 -8012678 + ID_B1 SINE B4 8 222 -2 4 1250 1075 122 168 11 chr17 87260117 87260308 -8012343 + URR1B DNA MER1_type 5 225 0 4 1250 572 279 14 0 chr17 87261340 87261480 -8011171 - B1_Mur1 SINE Alu -5 144 3 4 1250 420 304 86 95 chr17 87261822 87261847 -8010804 + L1MEc LINE L1 751 775 -5625 4 1250 897 147 35 0 chr17 87261847 87261990 -8010661 + B1_Mur3 SINE Alu 1 148 -1 4 1250 420 304 86 95 chr17 87261990 87262291 -8010360 + L1MEc LINE L1 776 1074 -5326 4 1250 380 276 184 26 chr17 87262308 87262498 -8010153 - RMER15 LTR ERVL 0 575 356 4 1250 381 300 74 57 chr17 87262707 87262951 -8009700 + L1MA7 LINE L1 6018 6265 -26 4 1250 764 100 18 9 chr17 87262994 87263105 -8009546 + PB1D9 SINE Alu 1 112 -8 4 1250 1298 73 0 6 chr17 87263113 87263293 -8009358 + (GAA)n Simple_repeat Simple_repeat 2 180 0 4 1250 529 234 18 0 chr17 87263301 87263412 -8009239 - MTD LTR MaLR -12 407 295 4 1250 2022 113 55 0 chr17 87263412 87263704 -8008947 + ORR1A2 LTR MaLR 1 308 -19 4 1250 1212 229 90 0 chr17 87263695 87263974 -8008677 - MTD LTR MaLR -115 304 1 4 1250 325 274 104 17 chr17 87264063 87264178 -8008473 + L1MEc LINE L1 1284 1408 -4992 4 1250 800 320 27 15 chr17 87264198 87264461 -8008190 + B4A SINE B4 27 292 0 4 1250 730 149 25 25 chr17 87264472 87264750 -8007901 + (CA)n Simple_repeat Simple_repeat 1 278 0 4 1250 751 291 74 10 chr17 87264926 87265225 -8007426 + L1M2 LINE L1 3724 4041 -2102 4 1250 230 325 75 38 chr17 87265238 87265398 -8007253 + Zaphod DNA Tip100 2994 3159 -872 4 1250 386 271 124 22 chr17 87265597 87265782 -8006869 + Zaphod DNA Tip100 3486 3689 -342 4 1250 327 49 0 0 chr17 87265839 87265880 -8006771 + (TCCC)n Simple_repeat Simple_repeat 3 43 0 4 1250 2908 268 99 64 chr17 87265884 87267294 -8005357 - Lx6 LINE L1 -62 7398 5639 4 1250 673 209 0 0 chr17 87267296 87267425 -8005226 + L1_Mur2 LINE L1 3594 3722 -2155 4 1250 234 91 0 0 chr17 87267578 87267611 -8005040 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 1250 230 300 63 38 chr17 87267728 87267967 -8004684 + L1MEc LINE L1 3348 3592 -2727 4 1250 567 205 8 25 chr17 87267983 87268103 -8004548 + B1_Mur3 SINE Alu 30 147 -2 4 1250 396 125 0 0 chr17 87268103 87268167 -8004484 + (CA)n Simple_repeat Simple_repeat 2 65 0 4 1250 521 276 62 62 chr17 87268167 87268329 -8004322 + B3A SINE B2 35 196 -2 4 1250 254 316 112 31 chr17 87268333 87268627 -8004024 + L1MEc LINE L1 3599 3916 -2403 4 1250 214 310 125 14 chr17 87268678 87268750 -8003901 - ID4 SINE ID -3 80 1 4 1250 232 281 46 58 chr17 87269255 87269342 -8003309 - Tigger7 DNA MER2_type -15 2476 2391 4 1250 1433 303 56 0 chr17 87269327 87269720 -8002931 - Tigger7 DNA MER2_type -2076 415 1 4 1250 402 314 28 39 chr17 87269962 87270144 -8002507 - Charlie5 DNA MER1_type -1 2623 2444 4 1250 369 277 111 37 chr17 87270377 87270512 -8002139 + MTEb LTR MaLR 231 375 -4 4 1250 237 268 98 49 chr17 87270538 87270640 -8002011 + MT2B LTR ERVL 152 258 -343 4 1250 342 304 39 19 chr17 87270570 87270674 -8001977 + B1_Mus2 SINE Alu 33 138 -9 4 1250 232 337 12 24 chr17 87270783 87270868 -8001783 - MER5B DNA MER1_type -68 110 27 4 1250 206 301 41 0 chr17 87271066 87271139 -8001512 - L2 LINE L2 -767 2652 2577 4 1250 650 77 0 11 chr17 87271388 87271480 -8001171 + B1_Mur4 SINE Alu 48 138 -12 4 1250 564 312 32 5 chr17 87271752 87271939 -8000712 - L1MB5 LINE L1 -10 6164 5973 4 1250 931 289 71 7 chr17 87272127 87272535 -8000116 - L1M2 LINE L1 -960 5183 4750 4 1250 272 329 75 17 chr17 87272582 87272755 -7999896 - MER112 DNA MER1_type -40 221 39 4 1250 428 301 54 98 chr17 87275561 87275826 -7996825 + B4A SINE B4 21 285 -7 4 1250 268 83 42 0 chr17 87275834 87275882 -7996769 + (TC)n Simple_repeat Simple_repeat 2 51 0 4 1250 198 0 0 0 chr17 87275882 87275904 -7996747 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 1250 187 310 17 17 chr17 87276223 87276282 -7996369 - L4 LINE RTE -1004 1025 967 4 1250 262 344 67 26 chr17 87277067 87277261 -7995390 - MIRb SINE MIR -62 206 5 4 1250 21 0 0 0 chr17 87277480 87277501 -7995150 + AT_rich Low_complexity Low_complexity 1 21 0 4 1250 406 129 177 65 chr17 87277958 87278082 -7994569 + L1MC LINE L1 3744 3881 -2265 4 1250 412 263 0 20 chr17 87278082 87278183 -7994468 + B3 SINE B2 1 99 -117 4 1250 405 0 0 0 chr17 87278189 87278234 -7994417 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1250 589 298 34 71 chr17 87278251 87278316 -7994335 + L1MC LINE L1 3880 3930 -2216 4 1250 276 30 0 0 chr17 87278316 87278349 -7994302 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 4 1250 589 298 34 71 chr17 87278349 87278579 -7994072 + L1MC LINE L1 3931 4163 -1983 4 1250 305 315 83 23 chr17 87279193 87279326 -7993325 + MIRb SINE MIR 16 156 -112 4 1250 262 302 32 40 chr17 87280197 87280321 -7992330 + MIR3 SINE MIR 8 130 -78 4 1250 186 276 33 49 chr17 87280670 87280731 -7991920 + L3 LINE CR1 4017 4076 -413 4 1250 1341 94 6 0 chr17 87282299 87282479 -7990172 - B2_Mm1a SINE B2 -11 182 2 4 1250 572 248 77 8 chr17 87283320 87283450 -7989201 - RSINE1 SINE B4 -15 150 12 4 1250 381 300 26 35 chr17 87283842 87283956 -7988695 - B4A SINE B4 -130 162 50 4 1250 1179 106 6 0 chr17 87284173 87284334 -7988317 + B2_Mm1t SINE B2 2 163 -30 4 1250 281 111 458 0 chr17 87284376 87284474 -7988177 + B2_Mm2 SINE B2 46 188 -7 4 1250 664 266 26 30 chr17 87284493 87284760 -7987891 - L1MEc LINE L1 -3111 3208 2943 4 1250 357 262 118 20 chr17 87284882 87285034 -7987617 - L1MEc LINE L1 -4911 1489 1323 4 1250 264 307 120 0 chr17 87285052 87285127 -7987524 + B4 SINE B4 186 269 -23 4 1250 1098 264 199 20 chr17 87285148 87285495 -7987156 + MTD LTR MaLR 1 409 -10 4 1250 2374 144 5 8 chr17 87285498 87285875 -7986776 + RLTR14 LTR ERV1 7 382 0 4 1250 225 0 0 0 chr17 87285907 87285932 -7986719 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 4 1250 788 306 149 39 chr17 87286024 87286666 -7985985 - L1MEc LINE L1 -5201 1199 487 4 1250 6010 242 70 44 chr17 87286680 87286837 -7985814 - Lx6 LINE L1 -11 7449 7268 4 1250 452 57 43 0 chr17 87286837 87286907 -7985744 + (TATAG)n Simple_repeat Simple_repeat 4 76 0 4 1250 6010 242 70 44 chr17 87286907 87287972 -7984679 - Lx6 LINE L1 -193 7267 6185 4 1250 288 0 0 0 chr17 87287972 87288004 -7984647 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 1250 6010 242 70 44 chr17 87288004 87288015 -7984636 - Lx6 LINE L1 -1276 6184 6174 4 1250 261 0 0 0 chr17 87288015 87288044 -7984607 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1250 22116 164 90 26 chr17 87288044 87289946 -7982705 - Lx6 LINE L1 -1287 6173 4165 4 1250 603 0 0 0 chr17 87289946 87290013 -7982638 + (TG)n Simple_repeat Simple_repeat 1 67 0 4 1250 22116 150 94 22 chr17 87290013 87292763 -7979888 - Lx6 LINE L1 -1716 4164 1208 4 1250 306 0 0 0 chr17 87292763 87292797 -7979854 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 4 1250 4724 178 67 5 chr17 87292797 87293593 -7979058 - Lx6 LINE L1 -6521 1207 369 4 1250 501 238 0 79 chr17 87293598 87293712 -7978939 + B3A SINE B2 15 119 -79 5 1250 378 300 44 35 chr17 87293710 87293824 -7978827 + B3A SINE B2 83 197 -1 5 156 649 188 126 27 chr17 87293916 87294102 -7978549 + B3 SINE B2 7 216 0 5 1251 243 318 22 45 chr17 87294414 87294503 -7978148 - MIRb SINE MIR -72 196 110 5 1251 264 286 171 83 chr17 87296308 87296525 -7976126 + B4A SINE B4 50 285 -7 5 1251 1194 80 0 0 chr17 87296610 87297001 -7975650 + (TG)n Simple_repeat Simple_repeat 1 391 0 5 1251 478 326 47 7 chr17 87297009 87297157 -7975494 + RSINE1 SINE B4 6 159 -6 5 1251 270 0 0 0 chr17 87297985 87298015 -7974636 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 5 1251 548 266 16 0 chr17 87298017 87298141 -7974510 - ID_B1 SINE B4 -11 213 88 5 1251 704 194 26 65 chr17 87298667 87298686 -7973965 - B1_Mur1 SINE Alu 0 149 138 5 1251 243 88 0 0 chr17 87298686 87298720 -7973931 + (TCTG)n Simple_repeat Simple_repeat 1 34 0 5 1251 704 194 26 65 chr17 87298720 87298854 -7973797 - B1_Mur1 SINE Alu -12 137 2 5 1251 545 350 113 68 chr17 87298854 87299351 -7973300 + L2 LINE L2 2481 2999 -420 5 1251 987 277 20 0 chr17 87300520 87300823 -7971828 + Lx7 LINE L1 7141 7449 -247 5 1251 503 173 0 9 chr17 87300831 87300942 -7971709 + (TG)n Simple_repeat Simple_repeat 1 110 0 5 1251 380 252 68 25 chr17 87300994 87301130 -7971521 + Lx7 LINE L1 7561 7680 -16 5 1251 329 77 53 32 chr17 87301168 87301262 -7971389 + (TTATA)n Simple_repeat Simple_repeat 5 100 0 5 1251 327 202 34 0 chr17 87301264 87301353 -7971298 + (TA)n Simple_repeat Simple_repeat 2 93 0 5 1251 330 26 0 0 chr17 87301354 87301393 -7971258 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1251 277 307 32 138 chr17 87302397 87302586 -7970065 - L4 LINE RTE -302 1727 1559 5 1251 243 324 61 54 chr17 87302649 87302796 -7969855 + Charlie15a DNA MER1_type 53 200 -24 5 1251 615 217 7 44 chr17 87306173 87306308 -7966343 + ID_B1 SINE B4 92 221 -3 5 1251 233 347 64 7 chr17 87306425 87306572 -7966079 + MIRc SINE MIR 21 171 -91 5 1251 2005 150 52 89 chr17 87307123 87307561 -7965090 - RLTR20B2 LTR ERVK -138 422 1 5 1251 254 301 33 74 chr17 87307785 87307907 -7964744 - PB1D9 SINE Alu -3 117 1 5 1251 267 284 80 13 chr17 87309999 87310074 -7962577 + B1F1 SINE Alu 18 97 -52 5 1251 510 17 0 0 chr17 87310091 87310150 -7962501 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 5 1251 738 310 11 104 chr17 87310150 87310420 -7962231 + B4A SINE B4 2 246 -46 5 1251 219 69 0 0 chr17 87310420 87310449 -7962202 + (GA)n Simple_repeat Simple_repeat 1 29 0 5 1251 372 262 12 6 chr17 87311451 87311620 -7961031 + (TG)n Simple_repeat Simple_repeat 2 171 0 5 1251 997 255 49 35 chr17 87311648 87311936 -7960715 - B4A SINE B4 0 292 1 5 1251 448 290 11 22 chr17 87311988 87312216 -7960435 + (TATG)n Simple_repeat Simple_repeat 1 225 0 5 1251 203 223 19 51 chr17 87312230 87312386 -7960265 + (TATG)n Simple_repeat Simple_repeat 4 154 0 5 1251 676 191 42 40 chr17 87312402 87312612 -7960039 - B3A SINE B2 -17 199 2 5 1251 264 176 31 133 chr17 87312621 87312719 -7959932 + LTR41 LTR ERVL 664 751 -17 5 1251 389 213 13 0 chr17 87312847 87312922 -7959729 - LTR33B LTR ERVL 0 503 428 5 1251 317 331 69 8 chr17 87312937 87313083 -7959568 + MIR SINE MIR 65 222 -46 5 1251 22 0 0 0 chr17 87313388 87313410 -7959241 + AT_rich Low_complexity Low_complexity 1 22 0 5 1251 270 366 0 18 chr17 87313711 87313825 -7958826 - PB1D10 SINE Alu -1 116 5 5 1251 445 273 66 6 chr17 87314811 87314977 -7957674 + B4A SINE B4 112 287 -5 5 1251 701 231 36 62 chr17 87315016 87315210 -7957441 - B3A SINE B2 -9 189 1 5 1251 360 152 0 0 chr17 87315252 87315318 -7957333 + (CACCAT)n Simple_repeat Simple_repeat 3 68 0 5 1251 426 313 40 84 chr17 87315831 87316082 -7956569 + MLT2B2 LTR ERVL 22 261 -254 5 1251 509 308 111 0 chr17 87316124 87316322 -7956329 - MLT1B LTR MaLR -165 225 6 5 1251 391 277 166 14 chr17 87316480 87316619 -7956032 - RSINE1 SINE B4 -3 162 3 5 1251 495 60 0 0 chr17 87317169 87317236 -7955415 + (CA)n Simple_repeat Simple_repeat 2 68 0 5 1251 234 62 0 0 chr17 87317879 87317911 -7954740 + (CAG)n Simple_repeat Simple_repeat 2 33 0 5 1251 706 180 76 70 chr17 87318229 87318414 -7954237 - B2_Mm2 SINE B2 -9 186 1 5 1251 541 231 308 0 chr17 87318619 87318788 -7953863 + ID_B1 SINE B4 2 222 -2 5 1251 283 301 110 43 chr17 87318949 87319112 -7953539 + MIRb SINE MIR 93 266 -2 5 1251 210 289 39 26 chr17 87319476 87319554 -7953097 - L3 LINE CR1 -1183 3306 3228 5 1251 953 224 196 42 chr17 87319814 87320126 -7952525 - MTE2b LTR MaLR 0 379 20 5 1251 348 51 51 0 chr17 87320295 87320354 -7952297 + (CA)n Simple_repeat Simple_repeat 2 63 0 5 1251 288 246 14 28 chr17 87322032 87322103 -7950548 + MLT1D LTR MaLR 21 90 -415 5 1251 229 172 15 15 chr17 87322872 87322937 -7949714 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1251 550 164 137 16 chr17 87322960 87323084 -7949567 + B1_Mus1 SINE Alu 1 139 -9 5 1251 657 0 0 0 chr17 87325109 87325182 -7947469 + (GTTTG)n Simple_repeat Simple_repeat 2 74 0 5 1251 1199 36 0 0 chr17 87325182 87325321 -7947330 - B1_Mus1 SINE Alu -9 139 1 5 1251 537 175 51 6 chr17 87325356 87325465 -7947186 + PB1D9 SINE Alu 5 120 -7 5 1251 182 37 0 36 chr17 87325480 87325508 -7947143 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 5 1251 261 0 0 0 chr17 87325508 87325536 -7947115 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1251 2316 174 48 98 chr17 87325690 87326230 -7946421 - RLTR11A LTR ERVK 0 528 16 5 1251 421 274 57 102 chr17 87326253 87326497 -7946154 - RLTR14 LTR ERV1 -41 341 109 5 1251 204 310 67 33 chr17 87327520 87327610 -7945041 + MER5A DNA MER1_type 33 125 -64 5 1251 233 106 106 0 chr17 87328679 87328726 -7943925 + B4 SINE B4 172 223 -69 5 1251 234 0 0 0 chr17 87328726 87328752 -7943899 + (A)n Simple_repeat Simple_repeat 1 26 0 5 1251 423 56 0 0 chr17 87328751 87328805 -7943846 + (GGGA)n Simple_repeat Simple_repeat 4 57 0 5 1251 623 36 36 0 chr17 87329274 87329358 -7943293 + (TCTCC)n Simple_repeat Simple_repeat 3 89 0 5 1251 375 275 118 20 chr17 87329906 87330058 -7942593 - MLT1B LTR MaLR -1 389 223 5 1251 457 270 7 116 chr17 87330543 87330698 -7941953 + B4 SINE B4 1 138 -154 5 1251 266 241 50 21 chr17 87330702 87330842 -7941809 + (CATA)n Simple_repeat Simple_repeat 4 147 0 5 1251 397 234 22 66 chr17 87330861 87331044 -7941607 + (CATA)n Simple_repeat Simple_repeat 4 178 0 5 1251 327 213 37 43 chr17 87331063 87331274 -7941377 + (CA)n Simple_repeat Simple_repeat 1 209 0 5 1251 252 240 51 39 chr17 87331365 87331543 -7941108 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1251 212 136 11 64 chr17 87331558 87331652 -7940999 + (CA)n Simple_repeat Simple_repeat 1 89 0 5 1251 2186 127 15 3 chr17 87332931 87333256 -7939395 - ORR1A4 LTR MaLR 0 329 1 5 1251 366 275 89 49 chr17 87333345 87333501 -7939150 - MTEa LTR MaLR -2 377 216 5 1251 598 222 100 76 chr17 87333486 87333696 -7938955 + MTEa LTR MaLR 10 224 -155 5 1251 292 312 36 18 chr17 87333678 87333789 -7938862 + MLT1K LTR MaLR 294 406 -189 5 1251 586 287 22 31 chr17 87334204 87334427 -7938224 + L1MB8 LINE L1 5948 6168 -10 5 1251 293 347 34 27 chr17 87334814 87334962 -7937689 + MER115 DNA Tip100 428 576 -117 5 1251 217 318 7 65 chr17 87335449 87335587 -7937064 + C-rich Low_complexity Low_complexity 6 135 0 5 1251 299 292 0 6 chr17 87335611 87335780 -7936871 + (CA)n Simple_repeat Simple_repeat 1 168 0 5 1251 801 272 116 56 chr17 87335904 87336336 -7936315 + Charlie2b DNA MER1_type 2315 2772 -10 5 1251 505 210 14 0 chr17 87336336 87336479 -7936172 + (TG)n Simple_repeat Simple_repeat 2 146 0 5 1251 219 69 0 0 chr17 87337377 87337406 -7935245 + (TCC)n Simple_repeat Simple_repeat 1 29 0 5 1251 435 273 102 58 chr17 87337797 87338003 -7934648 + B3 SINE B2 2 216 0 5 1251 261 0 0 0 chr17 87338056 87338085 -7934566 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1251 470 307 44 35 chr17 87338501 87338659 -7933992 + ID_B1 SINE B4 64 212 -12 5 1251 312 349 103 35 chr17 87338753 87338884 -7933767 + L1ME4a LINE L1 5694 5832 -292 5 1251 950 116 14 7 chr17 87338884 87339031 -7933620 + B1_Mur4 SINE Alu 1 148 -2 5 1251 312 349 103 35 chr17 87339031 87339160 -7933491 + L1ME4a LINE L1 5833 5972 -152 5 1251 228 200 44 0 chr17 87339539 87339584 -7933067 + polypyrimidine Low_complexity Low_complexity 2 48 0 5 1251 342 0 0 0 chr17 87340787 87340825 -7931826 + (TGG)n Simple_repeat Simple_repeat 3 40 0 5 1251 189 0 0 0 chr17 87341400 87341421 -7931230 + (TAG)n Simple_repeat Simple_repeat 2 22 0 5 1251 246 192 0 0 chr17 87341790 87341842 -7930809 + GA-rich Low_complexity Low_complexity 1 52 0 5 1251 798 196 40 45 chr17 87342364 87342562 -7930089 - B3 SINE B2 -19 197 1 5 1251 487 351 72 63 chr17 87342916 87343250 -7929401 - MER45C DNA Tip100 -615 338 2 5 1251 682 235 196 0 chr17 87344730 87344909 -7927742 + B3 SINE B2 1 214 -2 5 1251 373 204 94 31 chr17 87345294 87345390 -7927261 + RSINE1 SINE B4 24 125 -40 5 1251 837 178 0 0 chr17 87345471 87345696 -7926955 + GA-rich Low_complexity Low_complexity 1 225 0 5 1251 213 276 17 0 chr17 87345723 87345781 -7926870 + ID2 SINE ID 22 80 -3 5 1251 207 0 0 0 chr17 87345797 87345820 -7926831 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1251 588 342 58 85 chr17 87345881 87346326 -7926325 + Lx8 LINE L1 7035 7467 -6 5 1251 548 293 33 0 chr17 87346462 87346612 -7926039 + RSINE1 SINE B4 1 155 -10 5 1251 507 282 8 0 chr17 87346630 87346761 -7925890 + B1_Mur1 SINE Alu 1 132 -17 6 1251 998 58 73 0 chr17 87346914 87347051 -7925600 + B1_Mm SINE Alu 1 147 0 6 1251 338 268 140 7 chr17 87347408 87347551 -7925100 - MamRep605 Unknown Unknown -139 737 576 6 1251 396 0 0 0 chr17 87349007 87349051 -7923600 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 1251 295 311 9 19 chr17 87349061 87349169 -7923482 - L1ME3B LINE L1 -15 6225 6119 6 1251 602 280 13 6 chr17 87349179 87349337 -7923314 + RSINE1 SINE B4 3 161 -4 6 1251 414 0 0 0 chr17 87350388 87350434 -7922217 + (TC)n Simple_repeat Simple_repeat 1 46 0 6 1251 2302 185 96 36 chr17 87350434 87351176 -7921475 - RMER1B Other Other -11 1055 143 6 1251 187 328 0 0 chr17 87351926 87351984 -7920667 + MIRc SINE MIR 124 181 -87 6 1251 656 35 23 0 chr17 87352465 87352551 -7920100 + (TTCC)n Simple_repeat Simple_repeat 1 88 0 6 1251 1115 64 0 31 chr17 87352570 87352731 -7919920 - B2_Mm2 SINE B2 -39 156 1 6 1251 351 345 68 17 chr17 87353807 87353984 -7918667 + MLT1A1 LTR MaLR 219 404 -4 6 1251 1083 236 30 96 chr17 87354012 87354312 -7918339 - ORR1D1 LTR MaLR 0 374 99 6 1251 4094 52 40 20 chr17 87354312 87354861 -7917790 - LTRIS2 LTR ERV1 0 564 5 6 1251 1083 236 30 96 chr17 87354861 87354958 -7917693 - ORR1D1 LTR MaLR -276 98 3 6 1251 468 292 55 23 chr17 87354959 87355215 -7917436 - L1MEc LINE L1 -4327 2073 1810 6 1251 547 205 35 5 chr17 87355225 87355391 -7917260 + B3 SINE B2 8 215 -1 6 1251 425 341 115 68 chr17 87355405 87355770 -7916881 - L1MEc LINE L1 -4637 1778 1397 6 1251 213 290 16 0 chr17 87355817 87355879 -7916772 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 1251 183 42 0 0 chr17 87356193 87356217 -7916434 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1251 2779 63 200 9 chr17 87356238 87356668 -7915983 + RLTR1B LTR ERV1 1 512 0 6 1251 1108 121 111 5 chr17 87357610 87357809 -7914842 - URR1A DNA MER1_type -6 220 1 6 1251 24 0 0 0 chr17 87358102 87358126 -7914525 + AT_rich Low_complexity Low_complexity 1 24 0 6 1251 21 36 0 0 chr17 87362072 87362100 -7910551 + AT_rich Low_complexity Low_complexity 1 28 0 6 1251 28 0 0 0 chr17 87362454 87362482 -7910169 + GC_rich Low_complexity Low_complexity 1 28 0 6 1251 23 33 0 0 chr17 87362534 87362564 -7910087 + GC_rich Low_complexity Low_complexity 1 30 0 6 1251 215 173 23 69 chr17 87362655 87362742 -7909909 + (CGGG)n Simple_repeat Simple_repeat 2 84 0 6 1251 23 33 0 0 chr17 87362754 87362784 -7909867 + GC_rich Low_complexity Low_complexity 1 30 0 6 1251 205 171 0 0 chr17 87362873 87362908 -7909743 + (CTGGGG)n Simple_repeat Simple_repeat 5 39 0 6 1251 887 156 18 0 chr17 87364912 87365079 -7907572 + URR1A DNA MER1_type 57 226 0 6 1251 342 0 0 0 chr17 87365164 87365202 -7907449 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1251 405 0 0 0 chr17 87366028 87366073 -7906578 + (CATA)n Simple_repeat Simple_repeat 2 46 0 6 1251 274 363 104 33 chr17 87366120 87366331 -7906320 + MIR SINE MIR 27 252 -10 6 1251 216 0 0 0 chr17 87367785 87367809 -7904842 + (TGGGGG)n Simple_repeat Simple_repeat 6 29 0 6 1251 911 98 150 0 chr17 87368587 87368740 -7903911 - B2_Mm2 SINE B2 -19 176 1 6 1251 21 0 0 0 chr17 87369019 87369040 -7903611 + AT_rich Low_complexity Low_complexity 1 21 0 6 1251 234 264 98 0 chr17 87370124 87370287 -7902364 + (GCTG)n Simple_repeat Simple_repeat 1 179 0 6 1251 217 313 30 0 chr17 87371998 87372065 -7900586 + MER5A DNA MER1_type 48 116 -73 6 1251 21 0 0 0 chr17 87372771 87372792 -7899859 + AT_rich Low_complexity Low_complexity 1 21 0 6 1251 622 210 157 26 chr17 87373877 87374107 -7898544 - L1MB8 LINE L1 -115 6063 5804 6 1251 574 235 84 58 chr17 87374539 87374729 -7897922 - RMER30 DNA MER1_type -1 201 7 6 1251 252 100 0 0 chr17 87374742 87374782 -7897869 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 6 1251 229 274 168 8 chr17 87374865 87374990 -7897661 + L1M5 LINE L1 5634 5778 -346 6 1251 1219 28 0 0 chr17 87375061 87375206 -7897445 + B1_Mus2 SINE Alu 3 147 0 6 1251 186 118 0 0 chr17 87376176 87376210 -7896441 + (T)n Simple_repeat Simple_repeat 1 34 0 6 1251 464 75 0 0 chr17 87376232 87376299 -7896352 - B1_Mus2 SINE Alu -10 137 71 6 1251 582 296 112 94 chr17 87376504 87376825 -7895826 - HAL1 LINE L1 -1147 1360 1014 6 1251 836 154 42 0 chr17 87376825 87376968 -7895683 - B1_Mur1 SINE Alu 0 149 1 6 1251 582 296 112 94 chr17 87376968 87377049 -7895602 - HAL1 LINE L1 -1494 1013 951 6 1251 392 193 118 0 chr17 87377051 87377170 -7895481 + Tigger7 DNA MER2_type 2282 2414 -77 6 1251 438 257 30 73 chr17 87377502 87377666 -7894985 - MER20 DNA MER1_type -33 186 30 6 1251 1665 133 16 122 chr17 87377765 87378133 -7894518 - ORR1A4 LTR MaLR 0 329 1 6 1251 264 266 48 16 chr17 87378421 87378547 -7894104 - HAL1 LINE L1 -2283 224 95 6 1251 2226 145 68 8 chr17 87379279 87379676 -7892975 - MTC LTR MaLR 0 421 1 6 1251 831 261 114 44 chr17 87380289 87380561 -7892090 + B4A SINE B4 2 292 0 6 1251 647 141 0 63 chr17 87380567 87380948 -7891703 + (CA)n Simple_repeat Simple_repeat 1 356 0 6 1251 611 170 4 54 chr17 87380968 87381476 -7891175 + (CA)n Simple_repeat Simple_repeat 1 482 0 6 1251 214 241 0 33 chr17 87381761 87381821 -7890830 - L2 LINE L2 -3022 397 340 6 1251 677 269 204 0 chr17 87382374 87382614 -7890037 - B4 SINE B4 -3 289 1 6 1251 1122 99 0 0 chr17 87382617 87382788 -7889863 + (CA)n Simple_repeat Simple_repeat 1 171 0 6 1251 202 278 25 0 chr17 87383103 87383182 -7889469 + MIRm SINE MIR 60 150 -126 6 1251 488 300 14 0 chr17 87383407 87383547 -7889104 - ID_B1 SINE B4 -78 146 5 6 1251 281 376 106 53 chr17 87385499 87385878 -7886773 - MER20B DNA MER1_type -69 714 316 6 1251 563 0 15 0 chr17 87386938 87387005 -7885646 + (TC)n Simple_repeat Simple_repeat 1 68 0 6 1251 261 0 0 0 chr17 87387005 87387033 -7885618 + (CA)n Simple_repeat Simple_repeat 1 29 0 6 1251 252 260 65 0 chr17 87387389 87387466 -7885185 - ID4 SINE ID -1 82 1 6 1251 396 0 0 0 chr17 87387476 87387520 -7885131 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 6 1251 402 296 105 7 chr17 87387573 87387726 -7884925 - B3A SINE B2 -30 168 1 6 1251 235 266 0 59 chr17 87387749 87387817 -7884834 - ID4 SINE ID 0 83 20 6 1251 1076 219 5 0 chr17 87390911 87391126 -7881525 - B3 SINE B2 0 216 1 6 1251 566 227 250 0 chr17 87391436 87391608 -7881043 + B3 SINE B2 2 216 0 6 1251 470 309 79 85 chr17 87391799 87391929 -7880722 + MER2 DNA MER2_type 1 120 -225 6 1251 2003 159 123 5 chr17 87391929 87392302 -7880349 - MTC LTR MaLR 0 421 5 6 1251 1577 52 0 10 chr17 87392304 87392497 -7880154 + B2_Mm1a SINE B2 2 192 -1 6 1251 470 309 79 85 chr17 87392497 87392703 -7879948 + MER2 DNA MER2_type 121 338 -7 6 1251 311 263 59 29 chr17 87393565 87393667 -7878984 - PB1D10 SINE Alu -1 116 12 6 1251 281 266 62 21 chr17 87393584 87393680 -7878971 - ID_B1 SINE B4 -45 179 80 6 1251 26 74 0 0 chr17 87393684 87393738 -7878913 + AT_rich Low_complexity Low_complexity 1 54 0 6 1251 813 173 22 0 chr17 87395443 87395582 -7877069 + B1_Mur3 SINE Alu 1 142 -7 6 1251 1803 169 47 19 chr17 87400520 87400883 -7871768 - MTC LTR MaLR -8 413 41 6 1251 376 209 12 108 chr17 87400933 87401052 -7871599 + PB1D7 SINE Alu 13 127 0 6 1251 264 59 0 0 chr17 87401111 87401145 -7871506 + (A)n Simple_repeat Simple_repeat 1 34 0 6 1251 871 192 44 6 chr17 87401386 87401569 -7871082 + B3 SINE B2 3 192 -24 6 1251 258 327 19 9 chr17 87401727 87401835 -7870816 + MIRb SINE MIR 19 127 -141 6 1251 363 23 0 0 chr17 87401860 87401904 -7870747 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1251 309 279 44 18 chr17 87402842 87402945 -7869706 + B3A SINE B2 71 177 -21 6 1251 288 0 0 0 chr17 87402945 87402977 -7869674 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 6 1251 252 254 146 41 chr17 87404692 87404815 -7867836 + B4A SINE B4 16 151 -141 6 1251 527 204 57 21 chr17 87404931 87405071 -7867580 + B1F SINE Alu 2 146 -3 6 1251 259 179 18 0 chr17 87406411 87406467 -7866184 + MTD-int LTR MaLR 1180 1236 -22 6 1251 822 244 172 40 chr17 87406486 87406840 -7865811 + MTD LTR MaLR 5 405 -14 6 1251 514 299 0 7 chr17 87406846 87406981 -7865670 + ID_B1 SINE B4 86 219 -5 6 1251 346 349 101 0 chr17 87407225 87407374 -7865277 + RSINE1 SINE B4 2 165 0 6 1251 231 114 0 0 chr17 87407524 87407559 -7865092 + (GGA)n Simple_repeat Simple_repeat 3 37 0 6 1251 677 262 106 33 chr17 87407611 87407856 -7864795 + B4A SINE B4 30 292 0 6 1251 237 65 0 0 chr17 87407880 87407911 -7864740 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1251 1186 106 22 16 chr17 87408386 87408569 -7864082 + B2_Mm1t SINE B2 3 186 -7 6 1251 1442 288 88 14 chr17 87408814 87409406 -7863245 - L1MB8 LINE L1 -112 6066 5431 6 1251 354 23 0 0 chr17 87409650 87409693 -7862958 + (GAAA)n Simple_repeat Simple_repeat 4 46 0 6 1251 802 146 7 21 chr17 87410405 87410545 -7862106 - B1_Mur4 SINE Alu 0 150 13 6 1251 431 319 142 20 chr17 87410583 87410976 -7861675 - HAL1b LINE L1 -1405 604 164 6 1251 207 0 0 0 chr17 87411433 87411456 -7861195 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1251 796 92 22 58 chr17 87415276 87415415 -7857236 + B2_Mm2 SINE B2 7 140 -55 6 1251 901 204 43 19 chr17 87415800 87416010 -7856641 + B3 SINE B2 2 216 0 6 1251 181 364 15 0 chr17 87416552 87416618 -7856033 + MIR SINE MIR 44 110 -152 6 1251 300 288 0 59 chr17 87417206 87417291 -7855360 + ID4_ SINE ID 4 83 0 6 1251 890 274 63 18 chr17 87417291 87417622 -7855029 + L1MB8 LINE L1 5819 6164 -14 6 1251 1221 204 157 0 chr17 87417673 87418030 -7854621 + MTD LTR MaLR 1 413 -6 7 1251 657 265 129 26 chr17 87418187 87418529 -7854122 + Tigger9b DNA MER2_type 227 603 -21 7 1251 24 32 0 0 chr17 87418658 87418689 -7853962 + AT_rich Low_complexity Low_complexity 1 31 0 7 1251 408 276 120 6 chr17 87420723 87420898 -7851753 - RMER30 DNA MER1_type 0 202 8 7 1251 349 252 160 0 chr17 87421471 87421602 -7851049 + RSINE1 SINE B4 2 153 -12 7 1251 252 171 0 0 chr17 87422258 87422299 -7850352 + Lx8 LINE L1 7264 7304 -169 7 1251 248 221 12 38 chr17 87422346 87422426 -7850225 + Lx8 LINE L1 7396 7473 0 7 1251 418 255 200 44 chr17 87422448 87422698 -7849953 + B4 SINE B4 3 291 -1 7 1252 207 0 0 0 chr17 87425475 87425498 -7847153 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 7 1252 1235 34 0 0 chr17 87425498 87425644 -7847007 - B1_Mus1 SINE Alu -2 146 1 7 1252 24 0 0 0 chr17 87425872 87425896 -7846755 + AT_rich Low_complexity Low_complexity 1 24 0 7 1252 21 36 0 0 chr17 87426914 87426942 -7845709 + AT_rich Low_complexity Low_complexity 1 28 0 7 1252 1079 89 7 27 chr17 87427442 87427592 -7845059 + B1_Mm SINE Alu 1 147 0 7 1252 2216 52 102 91 chr17 87427769 87428111 -7844540 + ORR1A1 LTR MaLR 1 346 0 7 1252 14405 49 10 2 chr17 87428111 87429889 -7842762 + ORR1A1-int LTR MaLR 1 1792 0 7 1252 2983 40 0 0 chr17 87429889 87430235 -7842416 + ORR1A1 LTR MaLR 1 346 0 7 1252 267 336 60 45 chr17 87430463 87430597 -7842054 + MIRb SINE MIR 21 156 -112 7 1252 264 338 76 21 chr17 87430709 87430854 -7841797 + L2a LINE L2 2789 2941 -478 7 1252 204 303 141 0 chr17 87431052 87431151 -7841500 + L2a LINE L2 3314 3426 0 7 1252 692 226 62 36 chr17 87431457 87431650 -7841001 + B3A SINE B2 1 198 0 7 1252 216 314 14 0 chr17 87431868 87431938 -7840713 + PB1D10 SINE Alu 40 110 -7 7 1252 871 209 120 0 chr17 87431986 87432177 -7840474 + B3 SINE B2 1 214 -2 7 1252 21 0 0 0 chr17 87432185 87432206 -7840445 + AT_rich Low_complexity Low_complexity 1 21 0 7 1252 292 300 0 0 chr17 87432616 87432696 -7839955 + ID_B1 SINE B4 81 160 -64 7 1252 261 262 11 56 chr17 87432617 87432706 -7839945 + PB1D10 SINE Alu 1 85 -32 7 1252 400 301 35 0 chr17 87432749 87432862 -7839789 + B3A SINE B2 48 164 -34 7 1252 225 0 0 0 chr17 87432862 87432887 -7839764 + (GA)n Simple_repeat Simple_repeat 2 26 0 7 1252 410 53 18 0 chr17 87432887 87432944 -7839707 + (GGA)n Simple_repeat Simple_repeat 2 59 0 7 1252 725 144 8 23 chr17 87432981 87433109 -7839542 + B1_Mur4 SINE Alu 14 139 -11 7 1252 3584 13 3 0 chr17 87433124 87433516 -7839135 + MTA_Mm LTR MaLR 1 393 -3 7 1252 288 77 0 0 chr17 87433516 87433555 -7839096 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1252 21 36 0 0 chr17 87433817 87433845 -7838806 + AT_rich Low_complexity Low_complexity 1 28 0 7 1252 361 335 116 18 chr17 87434007 87434232 -7838419 - B4A SINE B4 -44 248 2 7 1252 1245 47 0 0 chr17 87435328 87435476 -7837175 + B1_Mus1 SINE Alu 1 148 0 7 1252 24 0 0 0 chr17 87435626 87435650 -7837001 + GC_rich Low_complexity Low_complexity 1 24 0 7 1252 462 300 133 0 chr17 87436196 87436346 -7836305 + ID_B1 SINE B4 30 199 -25 7 1252 278 239 91 0 chr17 87436617 87436705 -7835946 + L1M5 LINE L1 3742 3837 -2309 7 1252 378 61 0 0 chr17 87436849 87436898 -7835753 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1252 275 302 103 85 chr17 87436907 87437131 -7835520 + B4A SINE B4 65 292 0 7 1252 503 305 18 0 chr17 87438027 87438191 -7834460 - Tigger5 DNA MER2_type -2239 167 1 7 1252 227 197 114 38 chr17 87438220 87438299 -7834352 - PB1D10 SINE Alu -32 85 1 7 1252 306 0 0 0 chr17 87439105 87439139 -7833512 + (T)n Simple_repeat Simple_repeat 1 34 0 7 1252 869 230 58 16 chr17 87439867 87440110 -7832541 - MTD LTR MaLR -166 253 1 7 1252 1934 111 70 25 chr17 87440189 87440504 -7832147 - ORR1A4 LTR MaLR 0 329 1 7 1252 22 0 0 0 chr17 87440900 87440922 -7831729 + AT_rich Low_complexity Low_complexity 1 22 0 7 1252 318 324 78 14 chr17 87442454 87442595 -7830056 - MER5A1 DNA MER1_type -14 152 3 7 1252 438 317 20 20 chr17 87444046 87444194 -7828457 - L2b LINE L2 -9 3366 3219 7 1252 219 354 0 42 chr17 87445845 87445963 -7826688 + MIR SINE MIR 126 238 -24 7 1252 589 196 19 0 chr17 87446041 87446148 -7826503 + PB1D10 SINE Alu 1 109 -8 7 1252 270 291 12 12 chr17 87446163 87446243 -7826408 + B4A SINE B4 14 93 -199 7 1252 257 264 0 30 chr17 87447405 87447668 -7824983 + (TG)n Simple_repeat Simple_repeat 1 254 0 7 1252 816 276 29 29 chr17 87447685 87447961 -7824690 - B4A SINE B4 -16 276 1 7 1252 237 83 0 0 chr17 87449517 87449553 -7823098 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 1252 288 77 0 0 chr17 87450220 87450259 -7822392 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 7 1252 265 278 80 30 chr17 87450267 87450367 -7822284 - PB1D10 SINE Alu -9 108 4 7 1252 436 333 124 0 chr17 87450470 87450743 -7821908 + MER44A DNA MER2_type 1 307 -32 7 1252 388 129 98 49 chr17 87451296 87451459 -7821192 + (CATCC)n Simple_repeat Simple_repeat 5 175 0 7 1252 1455 168 146 6 chr17 87451801 87452131 -7820520 + ORR1C2 LTR MaLR 9 384 0 7 1252 342 0 0 0 chr17 87452530 87452568 -7820083 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 7 1252 339 85 0 0 chr17 87452631 87452678 -7819973 + (TA)n Simple_repeat Simple_repeat 2 48 0 7 1252 258 159 0 0 chr17 87454358 87454402 -7818249 + L4 LINE RTE 1982 2025 -4 7 1252 567 341 11 0 chr17 87454876 87455052 -7817599 - MER5A DNA MER1_type -7 182 5 7 1252 1272 105 29 42 chr17 87455772 87456010 -7816641 + ORR1B1 LTR MaLR 157 391 -3 7 1252 387 41 0 0 chr17 87456011 87456060 -7816591 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 1252 189 107 0 0 chr17 87457878 87457906 -7814745 + (TTTTG)n Simple_repeat Simple_repeat 5 32 0 7 1252 688 328 66 0 chr17 87458653 87458894 -7813757 + Tigger7 DNA MER2_type 3 259 -2232 7 1252 530 207 24 16 chr17 87458904 87459027 -7813624 - RMER13B LTR ERVK -780 128 5 7 1252 2294 238 96 69 chr17 87459050 87459910 -7812741 + RMER19B LTR ERVK 1 884 -18 7 1252 3757 43 0 0 chr17 87459910 87460350 -7812301 + L1Md_F3 LINE L1 6130 6569 -15 7 1252 301 316 0 0 chr17 87460428 87460507 -7812144 + MER44A DNA MER2_type 255 333 -6 7 1252 503 226 17 0 chr17 87460562 87460677 -7811974 + PB1D10 SINE Alu 1 117 0 7 1252 248 186 85 0 chr17 87463860 87463919 -7808732 - L1M3 LINE L1 -3327 2813 2750 7 1252 217 260 0 0 chr17 87464939 87464989 -7807662 + PB1D10 SINE Alu 27 76 -41 7 1252 4687 71 28 9 chr17 87465152 87465844 -7806807 - L1VL2 LINE L1 -1802 1813 1109 7 1252 1154 95 0 87 chr17 87465862 87466058 -7806593 - L1Md_F2 LINE L1 -13 6569 6391 7 1252 13867 67 4 1 chr17 87466060 87467839 -7804812 + L1_Mm LINE L1 3251 5035 -848 7 1252 4869 83 31 42 chr17 87467834 87468702 -7803949 - L1VL2 LINE L1 -2489 1126 271 7 1252 1094 95 0 0 chr17 87469132 87469279 -7803372 + B1_Mus1 SINE Alu 2 148 0 7 1252 1383 70 10 36 chr17 87469904 87470098 -7802553 + B2_Mm1t SINE B2 1 189 -4 7 1252 587 179 0 82 chr17 87471401 87471523 -7801128 + PB1D9 SINE Alu 3 114 -6 7 1252 660 26 0 0 chr17 87471541 87471619 -7801032 + (GAAA)n Simple_repeat Simple_repeat 2 79 0 7 1252 22 0 0 0 chr17 87472753 87472775 -7799876 + AT_rich Low_complexity Low_complexity 1 22 0 7 1252 1208 162 15 23 chr17 87472790 87472923 -7799728 + ORR1C1 LTR MaLR 8 174 -204 7 1252 216 0 0 0 chr17 87472923 87472947 -7799704 + (TC)n Simple_repeat Simple_repeat 1 24 0 7 1252 1208 194 150 13 chr17 87472947 87473141 -7799510 + ORR1C1 LTR MaLR 175 378 0 7 1252 795 230 25 64 chr17 87473323 87473527 -7799124 + B3A SINE B2 2 197 -1 7 1252 1134 82 7 0 chr17 87474209 87474355 -7798296 + B1_Mus2 SINE Alu 1 147 0 7 1252 630 288 36 20 chr17 87474530 87474725 -7797926 + B3A SINE B2 1 198 0 7 1252 2007 137 42 0 chr17 87474735 87475048 -7797603 + ORR1A3 LTR MaLR 1 326 0 7 1252 3997 109 66 11 chr17 87475048 87475670 -7796981 + MERVL_2A-int LTR ERVL 4953 5608 -153 7 1252 343 157 58 35 chr17 87475677 87475763 -7796888 + ORR1A3-int LTR MaLR 552 639 -1324 7 1252 250 122 0 0 chr17 87475763 87475804 -7796847 + MERVL-int LTR ERVL 5445 5485 0 7 1252 1031 205 106 19 chr17 87475804 87476068 -7796583 + MT2B LTR ERVL 1 287 -314 7 1252 4293 188 116 13 chr17 87476035 87477165 -7795486 + ORR1A3-int LTR MaLR 718 1963 0 7 1252 2127 80 16 3 chr17 87477165 87477479 -7795172 + ORR1A3 LTR MaLR 1 318 -8 7 1252 809 133 163 41 chr17 87478967 87479139 -7793512 + B2_Mm2 SINE B2 1 193 -2 7 1252 840 232 38 0 chr17 87479144 87479329 -7793322 + B3 SINE B2 1 192 -24 7 1252 308 265 190 20 chr17 87479649 87479749 -7792902 - PB1D7 SINE Alu -1 119 3 7 1252 993 229 23 23 chr17 87479812 87480027 -7792624 + B3 SINE B2 2 216 0 7 1252 286 265 60 0 chr17 87480041 87480124 -7792527 + ID SINE ID 1 88 -136 7 1252 507 141 32 68 chr17 87480850 87481040 -7791611 - RMER17C LTR ERVK -136 274 92 7 1252 519 183 11 0 chr17 87481048 87481141 -7791510 - B1_Mur3 SINE Alu -55 94 1 7 1252 294 315 113 63 chr17 87481160 87481852 -7790799 + L1MC4 LINE L1 6710 7393 -568 7 1252 849 168 7 20 chr17 87482287 87482439 -7790212 + B1_Mur4 SINE Alu 1 150 0 7 1252 366 42 0 0 chr17 87482439 87482487 -7790164 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 1252 801 222 31 14 chr17 87482513 87482714 -7789937 + B3 SINE B2 1 193 0 7 1252 239 98 0 68 chr17 87483308 87483343 -7789308 - MT2A LTR ERVL 0 533 499 7 1252 1138 89 0 0 chr17 87483343 87483489 -7789162 + B1_Mus2 SINE Alu 2 147 0 7 1252 1029 105 0 0 chr17 87483498 87483651 -7789000 + (GA)n Simple_repeat Simple_repeat 2 154 0 7 1252 677 200 165 117 chr17 87483651 87483917 -7788734 - MT2A LTR ERVL -254 279 1 7 1252 1444 79 5 0 chr17 87484091 87484281 -7788370 + B2_Mm1a SINE B2 2 192 -1 7 1252 180 224 61 0 chr17 87484406 87484455 -7788196 - L2a LINE L2 -55 3371 3320 8 1252 757 315 107 81 chr17 87484663 87485205 -7787446 + MLT1F2 LTR MaLR 1 556 -4 8 1252 218 0 0 86 chr17 87485395 87485430 -7787221 + (A)n Simple_repeat Simple_repeat 1 32 0 8 1252 234 0 0 0 chr17 87485704 87485730 -7786921 + (TC)n Simple_repeat Simple_repeat 2 27 0 8 1252 387 0 0 0 chr17 87485730 87485772 -7786879 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 1252 3570 55 51 0 chr17 87485968 87486245 -7786406 + MT2C_Mm LTR ERVL 1 298 -177 8 1252 369 0 0 0 chr17 87486245 87486286 -7786365 + (TC)n Simple_repeat Simple_repeat 1 41 0 8 1252 3570 55 51 0 chr17 87486286 87486460 -7786191 + MT2C_Mm LTR ERVL 299 474 -1 8 1252 7523 89 27 7 chr17 87486462 87487539 -7785112 + MTA_Mm-int LTR MaLR 1 1098 0 8 1252 3254 58 2 0 chr17 87487539 87487934 -7784717 + MTA_Mm LTR MaLR 1 396 0 8 1252 23 53 0 34 chr17 87489383 87489417 -7783234 + AT_rich Low_complexity Low_complexity 1 33 0 8 1252 690 238 14 0 chr17 87489417 87489564 -7783087 + B1_Mur1 SINE Alu 1 149 0 8 1252 23 53 0 34 chr17 87489564 87489588 -7783063 + AT_rich Low_complexity Low_complexity 1 24 0 8 1252 189 0 0 0 chr17 87489603 87489624 -7783027 + (TG)n Simple_repeat Simple_repeat 1 21 0 8 1252 527 273 51 39 chr17 87489652 87489808 -7782843 - RSINE1 SINE B4 -4 161 4 8 1252 616 107 10 10 chr17 87493492 87493596 -7779055 + (TTTC)n Simple_repeat Simple_repeat 1 104 0 8 1252 696 165 17 0 chr17 87493596 87493711 -7778940 - PB1D9 SINE Alu -1 119 3 8 1252 256 283 0 0 chr17 87493769 87493829 -7778822 + B4A SINE B4 80 139 -153 8 1252 822 244 52 24 chr17 87493877 87494087 -7778564 + B3 SINE B2 1 216 0 8 1252 968 209 23 0 chr17 87494252 87494424 -7778227 + B3A SINE B2 5 180 -18 8 1252 406 358 86 0 chr17 87494960 87495111 -7777540 + B4A SINE B4 2 165 -127 8 1252 320 226 0 11 chr17 87495147 87495241 -7777410 + (CA)n Simple_repeat Simple_repeat 1 93 0 8 1252 704 252 102 23 chr17 87495251 87495289 -7777362 + ORR1D2 LTR MaLR 86 121 -253 8 1252 417 39 0 0 chr17 87495289 87495340 -7777311 + (CGGGG)n Simple_repeat Simple_repeat 1 51 0 8 1252 883 257 58 0 chr17 87495340 87495566 -7777085 + ORR1D2 LTR MaLR 129 367 -3 8 1252 3246 179 89 113 chr17 87496380 87497249 -7775402 - RMER13A LTR ERVK -12 848 1 8 1252 1016 52 36 39 chr17 87497513 87497874 -7774777 + (CATA)n Simple_repeat Simple_repeat 1 359 0 8 1252 798 261 18 25 chr17 87497876 87498151 -7774500 + L1MC4a LINE L1 5690 5962 -1920 8 1252 240 281 44 25 chr17 87498829 87498932 -7773719 + L2c LINE L2 3231 3367 -20 8 1252 247 390 34 31 chr17 87498984 87499307 -7773344 + L2 LINE L2 2602 2925 -494 8 1252 189 0 0 0 chr17 87500399 87500420 -7772231 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1252 381 253 6 11 chr17 87500682 87500862 -7771789 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 1252 730 200 0 12 chr17 87500883 87501228 -7771423 + (CA)n Simple_repeat Simple_repeat 1 340 0 2 1252 342 172 17 0 chr17 87501244 87501302 -7771349 + HAL1-3A_ME LINE L1 1977 2035 -823 3 1252 235 238 78 16 chr17 87501534 87501598 -7771053 + ID4 SINE ID 7 74 -9 4 1252 307 279 36 29 chr17 87501645 87501785 -7770866 + L1ME1 LINE L1 6009 6149 -30 5 1252 203 195 0 47 chr17 87502405 87502448 -7770203 + MIR SINE MIR 53 93 -169 6 1252 206 246 18 53 chr17 87504110 87504180 -7768471 - L2b LINE L2 -8 3418 3310 7 1252 398 226 107 0 chr17 87504188 87504272 -7768379 + PB1D7 SINE Alu 2 94 -26 8 1252 482 296 41 21 chr17 87504819 87505017 -7767634 - MTD LTR MaLR -219 202 5 9 1252 270 307 160 28 chr17 87505047 87505228 -7767423 - ORR1E LTR MaLR -154 205 1 1 1252 493 263 44 0 chr17 87505725 87505839 -7766812 + B1F SINE Alu 27 145 -4 1 1252 297 140 20 0 chr17 87506006 87506056 -7766595 - U2 snRNA snRNA -137 51 1 1 1252 283 262 0 0 chr17 87506885 87506965 -7765686 + G-rich Low_complexity Low_complexity 1 80 0 1 1252 411 217 33 50 chr17 87509702 87509823 -7762828 + PB1D9 SINE Alu 2 120 0 1 1252 223 229 0 0 chr17 87509864 87509912 -7762739 + MIR SINE MIR 215 262 0 1 1252 262 226 13 0 chr17 87510528 87510608 -7762043 - ID4 SINE ID -60 92 11 1 1252 311 265 123 19 chr17 87510602 87510703 -7761948 + LTR48 LTR ERV1 612 726 -61 1 1252 207 0 0 0 chr17 87510703 87510726 -7761925 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 1 1252 311 265 123 19 chr17 87510726 87510778 -7761873 + LTR48 LTR ERV1 727 780 -7 1 1252 252 289 119 54 chr17 87511006 87511020 -7761631 - B2_Mm2 SINE B2 -10 185 11 1 1252 480 331 27 13 chr17 87511020 87511170 -7761481 - RSINE1 SINE B4 -2 163 12 2 1252 279 0 0 0 chr17 87511190 87511221 -7761430 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1252 272 163 0 0 chr17 87512103 87512146 -7760505 + MER34A LTR ERV1 5 47 -524 2 1252 514 322 82 48 chr17 87512561 87512740 -7759911 + MER2 DNA MER2_type 2 195 -150 2 1252 731 219 96 34 chr17 87512740 87512948 -7759703 + ID_B1 SINE B4 4 224 0 2 1252 514 322 82 48 chr17 87512948 87513084 -7759567 + MER2 DNA MER2_type 196 328 -17 2 1252 239 295 128 30 chr17 87513343 87513476 -7759175 + CR1_Mam LINE CR1 1655 1800 -404 2 1252 372 233 159 1 chr17 87513592 87513735 -7758916 - MIRb SINE MIR -67 201 30 2 1252 639 103 0 0 chr17 87513872 87513969 -7758682 + (TG)n Simple_repeat Simple_repeat 2 98 0 2 1252 281 268 48 12 chr17 87513970 87514053 -7758598 - B1F1 SINE Alu -31 118 33 2 1252 361 308 9 61 chr17 87514063 87514177 -7758474 + PB1D10 SINE Alu 5 112 -5 2 1252 1225 209 14 5 chr17 87514181 87514392 -7758259 + B3 SINE B2 1 213 -3 3 1252 1130 72 0 0 chr17 87516098 87516237 -7756414 - B1_Mus1 SINE Alu -5 143 5 3 1252 877 126 17 22 chr17 87516255 87516410 -7756241 - B2_Mm2 SINE B2 0 216 42 3 1252 219 36 0 0 chr17 87516782 87516810 -7755841 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 1252 1184 56 14 0 chr17 87516822 87516966 -7755685 - B1_Mus2 SINE Alu 0 147 2 3 1252 260 314 93 19 chr17 87517072 87517083 -7755568 - PB1D10 SINE Alu -1 116 3 3 1252 293 312 11 21 chr17 87517083 87517178 -7755473 - ID_B1 SINE B4 -47 177 84 3 1252 431 289 46 12 chr17 87517328 87517539 -7755112 + B4A SINE B4 4 278 -14 3 1252 357 351 142 36 chr17 87517982 87518268 -7754383 + MTEa LTR MaLR 1 321 -58 3 1252 1148 182 23 5 chr17 87518268 87518489 -7754162 - URR1B DNA MER1_type 0 225 1 3 1252 357 351 142 36 chr17 87518489 87518533 -7754118 + MTEa LTR MaLR 322 366 -13 3 1252 326 261 8 87 chr17 87518589 87518729 -7753922 - L1M5 LINE L1 -837 5463 5335 4 1252 407 304 56 0 chr17 87519722 87519847 -7752804 - B1F1 SINE Alu -12 137 6 4 1252 367 369 58 16 chr17 87521535 87521725 -7750926 + B4A SINE B4 81 278 -14 4 1252 664 231 112 0 chr17 87522388 87522548 -7750103 - B3 SINE B2 0 216 39 4 1252 230 157 39 0 chr17 87522524 87522575 -7750076 - RLTR28 LTR ERVL -447 77 25 4 1252 21 36 0 0 chr17 87522836 87522864 -7749787 + AT_rich Low_complexity Low_complexity 1 28 0 4 1252 367 169 143 0 chr17 87523009 87523086 -7749565 - B1_Mur3 SINE Alu -21 128 41 4 1252 271 297 200 54 chr17 87524138 87524323 -7748328 - MIRb SINE MIR -32 236 25 4 1252 541 191 55 0 chr17 87525968 87526078 -7746573 - B4A SINE B4 -19 273 158 4 1252 980 117 0 7 chr17 87526456 87526594 -7746057 - B1_Mur4 SINE Alu -13 137 1 4 1252 2112 153 65 13 chr17 87528740 87529138 -7743513 + RMER15 LTR ERVL 12 430 -145 5 1252 550 278 65 48 chr17 87529169 87529484 -7743167 + RMER21B LTR ERV1 298 718 -124 5 1252 464 191 11 0 chr17 87529534 87529623 -7743028 + RMER15 LTR ERVL 484 573 -2 5 1252 484 221 0 46 chr17 87530036 87530145 -7742506 - PB1D9 SINE Alu -15 105 2 5 1252 661 216 68 58 chr17 87530187 87530393 -7742258 + B3 SINE B2 1 208 -8 5 1252 240 226 48 0 chr17 87530397 87530459 -7742192 - MER58C DNA MER1_type -121 94 30 5 1252 254 336 50 14 chr17 87530646 87530785 -7741866 + HAL1 LINE L1 1447 1590 -917 5 1252 408 338 55 61 chr17 87532170 87532334 -7740317 - RSINE1 SINE B4 0 165 3 5 1252 206 292 15 0 chr17 87537168 87537233 -7735418 + CT-rich Low_complexity Low_complexity 3 68 0 5 1252 210 91 0 0 chr17 87537838 87537871 -7734780 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 5 1252 207 0 0 0 chr17 87538317 87538340 -7734311 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 5 1252 623 229 8 8 chr17 87538459 87538578 -7734073 + PB1D9 SINE Alu 2 120 0 6 1252 320 300 103 52 chr17 87538975 87539091 -7733560 + B1F2 SINE Alu 2 123 -24 6 1252 333 291 152 11 chr17 87539097 87539274 -7733377 - L2 LINE L2 -853 2566 2365 6 1252 464 198 45 0 chr17 87539581 87539684 -7732967 + B1_Mur4 SINE Alu 1 120 0 6 1252 389 53 0 18 chr17 87539956 87540013 -7732638 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 1252 960 196 0 0 chr17 87540014 87540167 -7732484 - B3 SINE B2 -63 153 1 6 1252 1827 150 58 9 chr17 87540364 87540706 -7731945 - RLTR15 LTR ERVK 0 359 1 6 1252 375 263 276 31 chr17 87541701 87542000 -7730651 - MTE2a LTR MaLR -2 377 6 6 1252 285 286 14 0 chr17 87543121 87543191 -7729460 - ID4 SINE ID -4 79 9 6 1252 194 271 27 41 chr17 87543347 87543420 -7729231 + MIRb SINE MIR 161 232 -36 6 1252 579 283 84 21 chr17 87544046 87544237 -7728414 + ID_B1 SINE B4 2 204 -20 7 1252 2086 123 71 26 chr17 87544306 87544657 -7727994 - ORR1B2 LTR MaLR 0 367 1 7 1252 210 37 0 0 chr17 87544790 87544817 -7727834 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1252 313 321 96 15 chr17 87544823 87544959 -7727692 - L1MCc LINE L1 -4957 1466 1320 7 1252 2373 82 3 6 chr17 87545098 87545418 -7727233 - L1_Mus2 LINE L1 0 6566 6248 7 1252 667 93 0 0 chr17 87545421 87545507 -7727144 + L1_Mus2 LINE L1 6171 6256 -310 7 1252 1801 290 129 53 chr17 87545654 87546666 -7725985 - Charlie1 DNA MER1_type 0 2781 1693 7 1252 498 193 62 27 chr17 87546687 87546786 -7725865 + B1_Mur1 SINE Alu 31 136 -13 7 1252 198 0 0 0 chr17 87546786 87546808 -7725843 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 7 1252 498 193 62 27 chr17 87546808 87546820 -7725831 + B1_Mur1 SINE Alu 137 146 -3 7 1252 3557 76 137 12 chr17 87546823 87547342 -7725309 - MT2B2 LTR ERVL 0 584 1 7 1252 369 312 95 74 chr17 87547448 87547468 -7725183 - B2_Mm2 SINE B2 0 195 176 7 1252 348 24 0 0 chr17 87547468 87547509 -7725142 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 1252 601 258 52 22 chr17 87547509 87547678 -7724973 - B3A SINE B2 -20 175 2 7 1252 753 210 21 0 chr17 87547956 87548099 -7724552 - B1_Mus2 SINE Alu 0 147 2 8 1252 23 54 0 0 chr17 87548108 87548145 -7724506 + AT_rich Low_complexity Low_complexity 1 37 0 8 1252 702 179 0 0 chr17 87548145 87548313 -7724338 + (TG)n Simple_repeat Simple_repeat 1 168 0 8 1252 643 152 0 0 chr17 87548313 87548405 -7724246 - B1_Mus1 SINE Alu -56 92 1 8 1252 418 200 95 0 chr17 87548720 87548815 -7723836 + B3A SINE B2 57 160 -38 8 1252 553 286 91 15 chr17 87548807 87549006 -7723645 - Charlie1 DNA MER1_type -2554 227 14 7 1252 237 300 39 29 chr17 87550048 87550151 -7722500 + LTR16A LTR ERVL 56 159 -292 8 1252 1738 154 2 234 chr17 87550488 87550980 -7721671 + ORR1C1 LTR MaLR 1 378 0 8 1252 1278 74 0 0 chr17 87551050 87551225 -7721426 + (TG)n Simple_repeat Simple_repeat 2 176 0 8 1252 675 94 0 0 chr17 87552176 87552272 -7720379 + (TCC)n Simple_repeat Simple_repeat 2 97 0 8 1252 397 288 91 0 chr17 87552726 87552858 -7719793 + L1MEf LINE L1 435 578 -5516 9 1252 189 0 0 0 chr17 87552888 87552909 -7719742 + (TTTTC)n Simple_repeat Simple_repeat 5 25 0 9 1252 333 267 11 22 chr17 87552921 87553013 -7719638 + BC1_Mm scRNA scRNA 2 92 -60 9 1252 404 319 136 101 chr17 87553173 87553290 -7719361 + L1MEf LINE L1 753 877 -5323 9 1252 207 0 0 0 chr17 87553290 87553313 -7719338 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9 1252 404 319 136 101 chr17 87553313 87553480 -7719171 + L1MEf LINE L1 878 1026 -5174 9 1252 216 0 0 0 chr17 87553480 87553504 -7719147 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 9 1252 404 319 136 101 chr17 87553504 87553742 -7718909 + L1MEf LINE L1 1027 1293 -4907 9 1252 338 285 45 84 chr17 87553806 87554093 -7718558 + L1MEf LINE L1 1289 1564 -4636 9 1252 228 382 13 0 chr17 87554096 87554172 -7718479 + ID4_ SINE ID 4 80 -3 9 1252 260 276 125 0 chr17 87554184 87554336 -7718315 + L1MEf LINE L1 1571 1741 -4459 9 1252 414 166 342 24 chr17 87554352 87554513 -7718138 - B3A SINE B2 0 216 4 9 1252 972 289 129 75 chr17 87554603 87555078 -7717573 + MLT2B1 LTR ERVL 3 553 -10 9 1252 1261 213 89 47 chr17 87555263 87555623 -7717028 - MTE2a LTR MaLR 0 379 5 9 1253 319 191 10 41 chr17 87556233 87556331 -7716320 + CT-rich Low_complexity Low_complexity 1 95 0 9 1253 2721 274 87 78 chr17 87556332 87557445 -7715206 - Lx8 LINE L1 -7 7466 6363 1 1253 833 142 42 7 chr17 87557445 87557587 -7715064 + B1_Mus2 SINE Alu 1 147 0 1 1253 2721 274 87 78 chr17 87557587 87557861 -7714790 - Lx8 LINE L1 -1111 6362 6068 1 1253 809 288 99 43 chr17 87557923 87558246 -7714405 - MER2 DNA MER2_type -2 343 3 1 1253 370 227 153 10 chr17 87558748 87558846 -7713805 - MLT1A1 LTR MaLR -2 406 295 1 1253 2031 144 146 3 chr17 87558991 87559347 -7713304 + MTB_Mm LTR MaLR 1 407 0 1 1253 238 358 58 29 chr17 87559391 87559529 -7713122 - MLT1A1 LTR MaLR -266 142 1 1 1253 316 291 32 57 chr17 87559835 87559959 -7712692 + L1ME1 LINE L1 409 529 -6089 1 1253 21 0 0 0 chr17 87559966 87559987 -7712664 + AT_rich Low_complexity Low_complexity 1 21 0 1 1253 368 358 81 21 chr17 87560039 87560273 -7712378 + L1ME1 LINE L1 2266 2513 -4120 1 1253 307 304 191 26 chr17 87560285 87560437 -7712214 + B3A SINE B2 2 178 -20 1 1253 327 350 10 5 chr17 87560749 87560953 -7711698 + L1ME1 LINE L1 4647 4851 -1686 1 1253 314 296 133 88 chr17 87561007 87561311 -7711340 + MLT2D LTR ERVL 51 360 -54 1 1253 462 75 0 0 chr17 87561311 87561378 -7711273 + (CA)n Simple_repeat Simple_repeat 1 67 0 1 1253 314 290 134 76 chr17 87561378 87561394 -7711257 + MLT2D LTR ERVL 361 374 -40 1 1253 822 122 0 0 chr17 87561417 87561565 -7711086 + (CA)n Simple_repeat Simple_repeat 1 148 0 1 1253 263 229 128 35 chr17 87561567 87561653 -7710998 + MT2B2 LTR ERVL 151 244 -340 1 1253 359 213 186 31 chr17 87561590 87561672 -7710979 + PB1D9 SINE Alu 9 108 -12 1 1253 281 26 0 26 chr17 87561672 87561711 -7710940 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 1 1253 359 213 186 31 chr17 87561711 87561725 -7710926 + PB1D9 SINE Alu 109 120 0 1 1253 258 289 160 32 chr17 87561954 87562236 -7710415 + L1ME1 LINE L1 5170 5487 -1050 1 1253 537 290 160 0 chr17 87562337 87562630 -7710021 + L1ME1 LINE L1 5731 6070 -500 1 1253 322 321 93 33 chr17 87562806 87563025 -7709626 + L1ME1 LINE L1 6306 6534 -21 1 1253 300 268 93 0 chr17 87563230 87563327 -7709324 - L1M4c LINE L1 -5595 789 684 1 1253 1197 48 14 0 chr17 87563331 87563476 -7709175 - B1_Mus1 SINE Alu 0 148 2 1 1253 396 0 0 0 chr17 87564222 87564266 -7708385 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 1 1253 299 307 68 73 chr17 87564421 87564668 -7707983 + MIRm SINE MIR 22 259 -17 1 1253 210 368 79 0 chr17 87564910 87564986 -7707665 + L2b LINE L2 3291 3372 -3 1 1253 229 272 21 21 chr17 87565005 87565099 -7707552 + CT-rich Low_complexity Low_complexity 3 96 0 1 1253 458 255 0 38 chr17 87565105 87565211 -7707440 - B1F SINE Alu -36 113 12 1 1253 315 0 0 0 chr17 87565382 87565417 -7707234 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1253 1034 231 60 87 chr17 87565436 87565802 -7706849 - ORR1E LTR MaLR 0 359 4 1 1253 228 111 0 27 chr17 87566492 87566529 -7706122 + L2b LINE L2 3322 3357 -18 1 1253 206 116 23 0 chr17 87566666 87566709 -7705942 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 1253 798 193 0 33 chr17 87567510 87567660 -7704991 - B1_Mur1 SINE Alu 0 149 5 1 1253 245 304 26 14 chr17 87567945 87568042 -7704609 - MIRc SINE MIR -133 135 34 1 1253 286 321 93 19 chr17 87568195 87568357 -7704294 + MIRb SINE MIR 95 268 0 1 1253 211 204 56 0 chr17 87568455 87568509 -7704142 + CT-rich Low_complexity Low_complexity 4 60 0 1 1253 351 0 0 0 chr17 87568759 87568798 -7703853 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1253 1087 127 191 0 chr17 87569096 87569285 -7703366 + URR1A DNA MER1_type 1 225 -1 1 1253 378 94 0 0 chr17 87569572 87569636 -7703015 + (CAGA)n Simple_repeat Simple_repeat 1 64 0 1 1253 197 308 0 71 chr17 87569823 87569893 -7702758 - L4 LINE RTE -1 2028 1964 1 1253 358 273 86 13 chr17 87570071 87570223 -7702428 + ORSL DNA Tip100 36 198 -77 1 1253 213 360 128 0 chr17 87571131 87571303 -7701348 - L4 LINE RTE -286 1743 1550 1 1253 418 246 108 87 chr17 87571895 87572136 -7700515 + L1M4 LINE L1 4156 4401 -1745 1 1253 2026 151 9 12 chr17 87572141 87572463 -7700188 + ORR1A4 LTR MaLR 1 321 -8 1 1253 377 349 0 22 chr17 87572986 87573165 -7699486 + CT-rich Low_complexity Low_complexity 3 177 0 1 1253 253 245 105 11 chr17 87574332 87574427 -7698224 - MIRc SINE MIR -126 142 39 1 1253 428 294 26 36 chr17 87575007 87575201 -7697450 - MIRb SINE MIR -43 225 34 1 1253 227 345 75 75 chr17 87575989 87576165 -7696486 - MIRc SINE MIR -88 188 13 1 1253 183 80 0 0 chr17 87576882 87576907 -7695744 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 1 1253 474 323 93 30 chr17 87576926 87577162 -7695489 + LTR48 LTR ERV1 1 251 -536 1 1253 30 0 0 0 chr17 87577364 87577394 -7695257 + AT_rich Low_complexity Low_complexity 1 30 0 1 1253 738 240 125 0 chr17 87577396 87577588 -7695063 - B3 SINE B2 0 216 1 1 1253 276 30 0 0 chr17 87579073 87579106 -7693545 + (TTAA)n Simple_repeat Simple_repeat 2 34 0 1 1253 1085 199 108 97 chr17 87579703 87580111 -7692540 + RMER10A LTR ERVL 5 424 -18 1 1253 207 0 0 0 chr17 87580111 87580134 -7692517 + (CACCC)n Simple_repeat Simple_repeat 4 26 0 1 1253 1085 199 108 97 chr17 87580134 87580158 -7692493 + RMER10A LTR ERVL 425 442 0 1 1253 184 184 26 0 chr17 87580472 87580510 -7692141 + L2c LINE L2 3276 3314 -73 1 1253 475 272 73 0 chr17 87581034 87581170 -7691481 - MER5C1 DNA MER1_type -51 212 67 1 1253 768 127 0 0 chr17 87581742 87581884 -7690767 + (CA)n Simple_repeat Simple_repeat 2 143 0 1 1253 1675 166 17 25 chr17 87582517 87582899 -7689752 + ORR1A4 LTR MaLR 1 386 -8 1 1253 1050 141 54 72 chr17 87583226 87583331 -7689320 + RMER10B LTR ERVL 1 103 -295 1 1253 4248 2 51 0 chr17 87583331 87583800 -7688851 - MT2_Mm LTR ERVL 0 493 1 1 1253 1050 141 54 72 chr17 87583800 87583880 -7688771 + RMER10B LTR ERVL 104 188 -210 1 1253 198 0 0 0 chr17 87583880 87583902 -7688749 + (TCCC)n Simple_repeat Simple_repeat 2 23 0 1 1253 1065 145 21 15 chr17 87583902 87584069 -7688582 + RMER10B LTR ERVL 189 398 0 1 1253 406 338 38 33 chr17 87586015 87586226 -7686425 + L1MC1 LINE L1 5957 6168 -165 1 1253 384 322 45 28 chr17 87586311 87586490 -7686161 + Tigger9b DNA MER2_type 4 185 -439 1 1253 242 270 20 110 chr17 87586620 87586720 -7685931 + MTEa LTR MaLR 2 92 -287 1 1253 585 221 134 35 chr17 87586824 87587026 -7685625 + Tigger9b DNA MER2_type 337 558 -66 1 1253 1299 80 0 17 chr17 87587043 87587222 -7685429 + B2_Mm2 SINE B2 2 177 -18 1 1253 658 195 0 25 chr17 87587271 87587434 -7685217 + CT-rich Low_complexity Low_complexity 2 160 0 1 1253 433 71 0 0 chr17 87587470 87587526 -7685125 - B1_Mus2 SINE Alu -91 56 1 1 1253 417 307 83 0 chr17 87587622 87587814 -7684837 - L1MB3 LINE L1 -162 6021 5814 1 1253 216 97 0 0 chr17 87587814 87587845 -7684806 + (TCC)n Simple_repeat Simple_repeat 3 33 0 1 1253 659 148 141 0 chr17 87587856 87587984 -7684667 - B1_Mus1 SINE Alu -1 147 2 1 1253 629 299 126 31 chr17 87588035 87588353 -7684298 + MLT1A1 LTR MaLR 1 348 -60 1 1253 484 293 0 0 chr17 87588420 87588519 -7684132 - PB1D10 SINE Alu -17 100 2 1 1253 277 211 18 0 chr17 87588520 87588577 -7684074 + MLT1A1 LTR MaLR 339 396 -12 1 1253 1242 245 61 11 chr17 87588583 87589041 -7683610 - L1MB3 LINE L1 -383 5791 5283 1 1253 583 243 29 0 chr17 87589047 87589187 -7683464 - L1MB3 LINE L1 -2044 4096 3953 1 1253 389 271 0 0 chr17 87589199 87589284 -7683367 + Tigger9b DNA MER2_type 540 624 0 1 1253 347 327 0 19 chr17 87589759 87589865 -7682786 + PB1 SINE Alu 21 124 -3 1 1253 458 249 160 24 chr17 87589903 87590072 -7682579 - B3A SINE B2 -4 194 3 1 1253 228 335 146 37 chr17 87590950 87591114 -7681537 + MIRb SINE MIR 19 200 -68 1 1253 1927 206 199 14 chr17 87591561 87591741 -7680910 - RMER19C LTR ERVK 0 611 388 1 1253 207 0 0 0 chr17 87591741 87591764 -7680887 + (CAG)n Simple_repeat Simple_repeat 3 25 0 1 1253 1927 206 199 14 chr17 87591764 87592096 -7680555 - RMER19C LTR ERVK -224 387 4 1 1253 459 0 0 0 chr17 87592649 87592700 -7679951 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1253 213 65 0 0 chr17 87592832 87592863 -7679788 + (TTTTTG)n Simple_repeat Simple_repeat 5 35 0 1 1253 226 297 65 39 chr17 87593610 87593687 -7678964 - RMER17B LTR ERVK -870 88 10 1 1253 858 159 235 6 chr17 87593736 87593919 -7678732 + URR1A DNA MER1_type 2 226 0 1 1253 324 314 57 0 chr17 87594450 87594555 -7678096 + PB1D10 SINE Alu 2 112 -5 1 1253 710 292 18 5 chr17 87594811 87595028 -7677623 + ID_B1 SINE B4 1 220 -4 1 1253 879 168 14 0 chr17 87595038 87595181 -7677470 + B1_Mus1 SINE Alu 3 147 -1 1 1253 30 0 0 0 chr17 87595181 87595211 -7677440 + AT_rich Low_complexity Low_complexity 1 30 0 1 1253 203 215 0 15 chr17 87595267 87595333 -7677318 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 1 1253 350 355 152 25 chr17 87595621 87595858 -7676793 + L1ME4a LINE L1 5570 5836 -288 1 1253 732 273 34 0 chr17 87595908 87596084 -7676567 + B3A SINE B2 1 182 -16 1 1253 456 285 0 0 chr17 87596110 87596289 -7676362 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 1 1253 466 223 13 0 chr17 87596333 87596490 -7676161 + (TG)n Simple_repeat Simple_repeat 2 160 0 1 1253 310 207 305 114 chr17 87596498 87596520 -7676131 - RSINE1 SINE B4 0 165 149 1 1253 2091 118 15 33 chr17 87596520 87596852 -7675799 + ORR1A3 LTR MaLR 1 326 0 1 1253 310 207 305 114 chr17 87596852 87596960 -7675691 - RSINE1 SINE B4 -17 148 10 1 1253 414 0 0 0 chr17 87596976 87597022 -7675629 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1253 322 250 200 0 chr17 87597022 87597102 -7675549 - PB1D7 SINE Alu -19 101 6 1 1253 275 291 22 65 chr17 87597037 87597129 -7675522 - B4A SINE B4 -140 152 65 1 1253 228 156 22 22 chr17 87597140 87597186 -7675465 + MLT1B LTR MaLR 325 370 -20 1 1253 798 127 8 0 chr17 87597287 87597413 -7675238 - B1_Mur4 SINE Alu -22 128 2 1 1253 891 258 67 15 chr17 87598244 87598512 -7674139 + Lx5 LINE L1 6768 7049 -1 1 1253 1572 198 14 150 chr17 87599077 87599589 -7673062 + RMER10A LTR ERVL 1 442 0 1 1253 753 162 0 0 chr17 87601163 87601338 -7671313 + (CA)n Simple_repeat Simple_repeat 1 175 0 1 1253 304 109 0 42 chr17 87601338 87601386 -7671265 + HAL1-3A_ME LINE L1 1975 2020 -838 1 1253 1116 128 0 0 chr17 87601393 87601572 -7671079 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 1253 1026 144 0 0 chr17 87601584 87601764 -7670887 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1253 486 33 0 0 chr17 87602194 87602254 -7670397 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 1253 584 316 37 108 chr17 87604584 87604646 -7668005 - MLT1C LTR MaLR -6 461 401 1 1253 954 145 21 0 chr17 87604646 87604791 -7667860 + B1_Mur4 SINE Alu 2 149 -1 1 1253 584 316 37 108 chr17 87604791 87605051 -7667600 - MLT1C LTR MaLR -67 400 162 1 1253 585 249 89 51 chr17 87605081 87605318 -7667333 - MER33 DNA MER1_type -70 254 9 1 1253 288 70 0 0 chr17 87605559 87605602 -7667049 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 1253 242 282 97 21 chr17 87605877 87606022 -7666629 - MamRep605 Unknown Unknown -690 186 31 2 1253 270 0 0 0 chr17 87606337 87606367 -7666284 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1253 681 301 41 61 chr17 87606685 87606979 -7665672 + B4A SINE B4 1 288 -4 2 1253 735 189 107 42 chr17 87607213 87607428 -7665223 + LTR48 LTR ERV1 515 743 -44 2 1253 387 0 0 0 chr17 87607637 87607680 -7664971 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1253 1174 145 129 5 chr17 87607736 87607937 -7664714 + URR1A DNA MER1_type 1 226 0 2 1253 435 100 0 0 chr17 87609882 87609952 -7662699 + (GA)n Simple_repeat Simple_repeat 2 71 0 2 1253 441 281 8 40 chr17 87610294 87610420 -7662231 - MT2A LTR ERVL -105 428 307 2 1253 297 225 200 35 chr17 87610831 87610946 -7661705 - MTEa LTR MaLR -245 134 1 2 1253 2891 19 0 0 chr17 87611595 87611917 -7660734 - RLTRETN_Mm LTR ERVK 0 322 1 2 1253 216 0 0 0 chr17 87612004 87612028 -7660623 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 2 1253 499 311 72 41 chr17 87612237 87612632 -7660019 + MLT1B LTR MaLR 6 400 -8 2 1253 498 344 71 5 chr17 87612620 87612816 -7659835 - LTR33 LTR ERVL -301 214 6 2 1253 657 224 30 2 chr17 87613318 87613484 -7659167 - B3 SINE B2 0 198 20 2 1253 189 0 0 0 chr17 87613698 87613719 -7658932 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 2 1253 332 191 43 14 chr17 87614340 87614409 -7658242 - RLTR12B LTR ERVK -15 513 443 2 1253 1707 144 43 43 chr17 87614413 87614718 -7657933 - RLTR12B LTR ERVK -223 305 1 2 1253 201 349 92 34 chr17 87614718 87614937 -7657714 - MIR SINE MIR -17 245 20 2 1253 2622 73 11 174 chr17 87615351 87615612 -7657039 + MTB LTR MaLR 1 266 -134 2 1253 939 146 0 0 chr17 87615612 87615770 -7656881 + (TTCTC)n Simple_repeat Simple_repeat 1 158 0 2 1253 2622 73 11 174 chr17 87615770 87615986 -7656665 + MTB LTR MaLR 267 400 0 2 1253 1555 62 16 0 chr17 87616434 87616626 -7656025 + B2_Mm2 SINE B2 1 195 0 2 1253 1013 87 6 34 chr17 87616656 87616835 -7655816 + (GGGGA)n Simple_repeat Simple_repeat 3 176 0 2 1253 732 80 0 0 chr17 87616835 87616934 -7655717 + (GAAAA)n Simple_repeat Simple_repeat 1 100 0 2 1253 272 206 63 0 chr17 87617176 87617239 -7655412 + MIR SINE MIR 89 155 -107 2 1253 613 316 88 17 chr17 87617243 87617539 -7655112 - MLT1A0 LTR MaLR -39 326 10 2 1253 182 278 104 62 chr17 87619528 87619624 -7653027 - MIRc SINE MIR -139 129 30 2 1253 301 277 60 0 chr17 87620171 87620254 -7652397 - RMER15-int LTR ERVL -30 4969 4882 2 1253 1261 274 126 17 chr17 87620480 87620963 -7651688 - RMER15-int LTR ERVL -305 4694 4159 2 1253 185 156 62 0 chr17 87621442 87621474 -7651177 - MIR SINE MIR -135 73 40 2 1253 468 0 0 0 chr17 87621521 87621573 -7651078 + (TTG)n Simple_repeat Simple_repeat 2 53 0 2 1253 351 44 0 0 chr17 87621573 87621618 -7651033 + (TTC)n Simple_repeat Simple_repeat 2 46 0 2 1253 858 126 0 23 chr17 87621634 87621764 -7650887 - B1_Mur4 SINE Alu -2 148 22 2 1253 1039 131 179 5 chr17 87622363 87622570 -7650081 + ORR1D1 LTR MaLR 3 245 -129 2 1253 1181 183 55 16 chr17 87622577 87622832 -7649819 - RLTR11A LTR ERVK -1 527 263 2 1253 802 237 23 23 chr17 87622916 87623093 -7649558 + ORR1B2 LTR MaLR 1 177 -190 2 1253 473 330 87 0 chr17 87623543 87623728 -7648923 + ID_B1 SINE B4 24 224 0 2 1253 369 361 36 60 chr17 87624312 87624390 -7648261 + RSINE1 SINE B4 2 78 -87 2 1253 369 58 0 0 chr17 87624390 87624442 -7648209 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1253 369 361 36 60 chr17 87624442 87624531 -7648120 + RSINE1 SINE B4 79 165 0 2 1253 322 362 52 84 chr17 87624590 87624958 -7647693 - RLTR11A2 LTR ERVK -56 471 116 2 1253 623 225 0 0 chr17 87626735 87626846 -7645805 + PB1D9 SINE Alu 4 114 -6 2 1253 253 330 93 0 chr17 87626957 87627054 -7645597 - MIRb SINE MIR -46 222 117 2 1253 241 278 74 50 chr17 87627061 87627182 -7645469 + MT2A LTR ERVL 1 124 -409 2 1253 619 222 130 14 chr17 87627074 87627220 -7645431 + MTEa LTR MaLR 17 179 -200 2 1253 2902 249 89 21 chr17 87627253 87627664 -7644987 + Lx6 LINE L1 17 418 -7310 2 1253 1278 75 0 0 chr17 87627664 87628025 -7644626 + (CA)n Simple_repeat Simple_repeat 1 361 0 2 1253 2902 249 89 21 chr17 87628025 87628741 -7643910 + Lx6 LINE L1 419 1222 -6506 2 1253 3727 166 30 30 chr17 87628734 87629442 -7643209 + Lx6 LINE L1 1341 2057 -3823 2 1253 351 0 0 0 chr17 87629442 87629481 -7643170 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1253 3727 166 30 30 chr17 87629481 87629598 -7643053 + Lx6 LINE L1 2058 2166 -3714 2 1253 11006 173 88 46 chr17 87629594 87632657 -7639994 + Lx6 LINE L1 3628 6911 -549 2 1253 239 300 89 0 chr17 87632657 87632747 -7639904 - RLTR13C2 LTR ERVK -47 761 664 2 1253 11006 173 88 46 chr17 87632747 87633257 -7639394 + Lx6 LINE L1 6912 7460 0 2 1253 990 87 0 0 chr17 87633284 87633422 -7639229 + (GGAA)n Simple_repeat Simple_repeat 4 141 0 2 1253 281 222 0 0 chr17 87633495 87633549 -7639102 + MTEa LTR MaLR 283 336 -43 2 1253 207 324 0 14 chr17 87633579 87633648 -7639003 - MIRb SINE MIR -149 119 52 2 1253 247 188 203 0 chr17 87633822 87633891 -7638760 + PB1D9 SINE Alu 3 85 -35 2 1253 496 143 23 16 chr17 87633891 87634019 -7638632 + (TG)n Simple_repeat Simple_repeat 2 130 0 2 1253 628 159 23 6 chr17 87634070 87634247 -7638404 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1253 209 140 17 50 chr17 87635050 87635110 -7637541 + (TTA)n Simple_repeat Simple_repeat 2 59 0 2 1253 223 232 205 12 chr17 87635332 87635415 -7637236 - MIR SINE MIR -51 211 113 2 1253 227 224 149 0 chr17 87635866 87635933 -7636718 + MIRc SINE MIR 82 158 -110 2 1253 225 314 23 99 chr17 87636820 87636951 -7635700 - MER5B DNA MER1_type -14 164 44 2 1253 605 251 148 25 chr17 87637696 87637892 -7634759 + ID_B1 SINE B4 1 220 -4 2 1253 255 316 0 0 chr17 87638283 87638359 -7634292 - ID4 SINE ID -3 80 5 2 1253 238 292 14 110 chr17 87638408 87638481 -7634170 - Tigger7 DNA MER2_type -9 2482 2417 2 1253 198 71 0 0 chr17 87638513 87638541 -7634110 + (GA)n Simple_repeat Simple_repeat 1 28 0 2 1253 605 244 79 0 chr17 87638572 87638699 -7633952 + B1_Mur2 SINE Alu 6 142 -7 2 1253 227 157 20 0 chr17 87638718 87638769 -7633882 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 1253 894 179 104 35 chr17 87638780 87638982 -7633669 + B3 SINE B2 1 216 0 2 1253 2751 216 140 42 chr17 87639302 87640031 -7632620 + RMER13A LTR ERVK 1 800 -60 2 1253 304 287 10 21 chr17 87640151 87640247 -7632404 - RSINE1 SINE B4 0 165 71 2 1253 313 345 40 27 chr17 87640250 87640399 -7632252 - B4A SINE B4 -141 151 1 2 1253 409 331 113 55 chr17 87641127 87641418 -7631233 + ORR1D1 LTR MaLR 1 308 -66 2 1253 3682 303 55 75 chr17 87641456 87642002 -7630649 + ORR1E-int LTR MaLR 1 572 -1008 2 1253 1587 62 0 0 chr17 87642002 87642194 -7630457 + B2_Mm1t SINE B2 1 192 -1 2 1253 3682 303 55 75 chr17 87642194 87642216 -7630435 + ORR1E-int LTR MaLR 573 589 -991 2 1253 306 297 0 13 chr17 87642216 87642291 -7630360 + ID4_ SINE ID 5 78 -5 2 1253 639 0 0 0 chr17 87642300 87642371 -7630280 + (GA)n Simple_repeat Simple_repeat 2 72 0 2 1253 3682 303 55 75 chr17 87642371 87642423 -7630228 + ORR1E-int LTR MaLR 609 656 -924 2 1253 2770 168 55 24 chr17 87642423 87642967 -7629684 + RLTR31_Mm LTR ERVK 1 561 0 2 1253 3682 303 55 75 chr17 87642967 87643355 -7629296 + ORR1E-int LTR MaLR 657 1035 -545 2 1253 1141 257 62 81 chr17 87643355 87643740 -7628911 - MTE2a LTR MaLR -1 378 1 2 1253 3682 303 55 75 chr17 87643740 87644048 -7628603 + ORR1E-int LTR MaLR 1036 1345 -235 2 1253 882 178 0 0 chr17 87644048 87644183 -7628468 + B1_Mus1 SINE Alu 1 135 -13 2 1253 241 26 53 0 chr17 87644183 87644221 -7628430 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 2 1253 3682 303 55 75 chr17 87644221 87644331 -7628320 + ORR1E-int LTR MaLR 1346 1412 -168 2 1253 929 181 0 0 chr17 87644362 87644511 -7628140 - B1_Mur4 SINE Alu 0 150 2 2 1253 684 0 0 0 chr17 87644528 87644604 -7628047 + (TTC)n Simple_repeat Simple_repeat 2 77 0 2 1253 250 319 164 0 chr17 87644769 87644861 -7627790 + ORR1E-int LTR MaLR 1417 1527 -53 2 1253 559 334 96 50 chr17 87644861 87645204 -7627447 + ORR1E LTR MaLR 1 359 0 2 1253 215 331 136 7 chr17 87645521 87645661 -7626990 - MIRc SINE MIR -35 233 76 2 1253 241 226 81 23 chr17 87645661 87645747 -7626904 + PB1D9 SINE Alu 5 95 -25 2 1253 205 329 71 0 chr17 87645945 87646015 -7626636 - MIRb SINE MIR -78 190 116 2 1253 195 42 0 0 chr17 87646250 87646274 -7626377 + (TTG)n Simple_repeat Simple_repeat 1 24 0 2 1253 351 0 0 0 chr17 87646629 87646668 -7625983 + (TC)n Simple_repeat Simple_repeat 2 40 0 2 1253 440 48 16 0 chr17 87646670 87646733 -7625918 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 1253 337 224 0 15 chr17 87647112 87647180 -7625471 - tRNA-Ala-GCA tRNA tRNA 0 75 9 2 1253 439 227 118 0 chr17 87647186 87647296 -7625355 - PB1 SINE Alu -3 124 2 2 1253 974 263 74 6 chr17 87647337 87647662 -7624989 - RLTR11A2 LTR ERVK -2 525 179 2 1253 763 236 47 107 chr17 87647789 87648125 -7624526 - RLTR11A2 LTR ERVK -227 300 1 2 1253 21 0 0 0 chr17 87648577 87648598 -7624053 + AT_rich Low_complexity Low_complexity 1 21 0 2 1253 297 0 0 0 chr17 87648796 87648829 -7623822 + (A)n Simple_repeat Simple_repeat 1 33 0 2 1253 1028 92 4 15 chr17 87649443 87649727 -7622924 + (TG)n Simple_repeat Simple_repeat 1 280 0 2 1253 1902 160 79 15 chr17 87649866 87650208 -7622443 + ORR1B1 LTR MaLR 3 366 -28 2 1253 262 268 60 12 chr17 87650240 87650323 -7622328 - MER5A1 DNA MER1_type -5 161 75 2 1253 300 27 0 0 chr17 87650418 87650455 -7622196 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 1253 344 213 189 11 chr17 87650642 87650737 -7621914 - RMER21B LTR ERV1 -385 457 346 2 1253 253 77 0 133 chr17 87651057 87651102 -7621549 + B4A SINE B4 180 218 -74 2 1253 1767 273 53 117 chr17 87651209 87651561 -7621090 + Lx5 LINE L1 6055 6366 -684 2 1253 243 0 0 0 chr17 87651561 87651588 -7621063 + (TATG)n Simple_repeat Simple_repeat 4 30 0 2 1253 1767 273 53 117 chr17 87651588 87652300 -7620351 + Lx5 LINE L1 6367 7050 0 2 1253 360 0 0 0 chr17 87652303 87652343 -7620308 + (CATA)n Simple_repeat Simple_repeat 2 41 0 2 1253 651 219 0 16 chr17 87652348 87652469 -7620182 + B1_Mur4 SINE Alu 1 119 -31 2 1253 249 214 11 116 chr17 87652389 87652484 -7620167 + RLTR25B LTR ERVK 442 526 -502 2 1253 361 274 74 0 chr17 87652511 87652606 -7620045 - B3 SINE B2 -2 214 113 2 1253 838 276 62 43 chr17 87652779 87653055 -7619596 - B4 SINE B4 -10 282 2 2 1253 299 193 18 0 chr17 87656823 87656880 -7615771 + B1_Mur1 SINE Alu 91 148 -1 2 1253 571 274 0 95 chr17 87657529 87657594 -7615057 + ID_B1 SINE B4 27 216 -8 2 1253 802 158 0 41 chr17 87657594 87657739 -7614912 + B1_Mus2 SINE Alu 1 139 -8 3 1253 534 158 28 21 chr17 87657742 87657884 -7614767 + G-rich Low_complexity Low_complexity 5 147 0 3 1253 1431 50 0 0 chr17 87657884 87658064 -7614587 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 3 1253 2139 101 6 51 chr17 87658938 87659272 -7613379 - ORR1A2 LTR MaLR -8 319 1 3 1253 11255 128 67 10 chr17 87659272 87661129 -7611522 - ORR1A2-int LTR MaLR 0 1963 2 3 1253 2077 111 39 0 chr17 87661133 87661440 -7611211 - ORR1A2 LTR MaLR -8 319 1 3 1253 436 230 80 29 chr17 87661627 87661762 -7610889 - B4A SINE B4 -77 147 14 3 1253 296 146 21 0 chr17 87661754 87661802 -7610849 + B1_Mur1 SINE Alu 101 149 0 3 1253 320 286 70 18 chr17 87662194 87662308 -7610343 - PB1D9 SINE Alu 0 120 1 3 1253 545 293 35 46 chr17 87663150 87663414 -7609237 - 7SK RNA RNA -11 320 8 3 1253 196 333 12 0 chr17 87664663 87664744 -7607907 - L2 LINE L2 -839 2580 2499 3 1253 205 221 12 38 chr17 87665249 87665329 -7607322 + (CCCG)n Simple_repeat Simple_repeat 2 79 0 3 1253 180 0 0 0 chr17 87665774 87665794 -7606857 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1253 993 130 14 0 chr17 87666333 87666479 -7606172 - B1_Mus1 SINE Alu 0 148 1 3 1253 193 189 0 0 chr17 87666551 87666588 -7606063 + L2 LINE L2 1738 1774 -1645 3 1253 1759 107 20 8 chr17 87666715 87666970 -7605681 + ORR1B1 LTR MaLR 129 386 -8 3 1253 213 316 12 50 chr17 87667100 87667180 -7605471 + L2 LINE L2 2279 2355 -1064 3 1253 751 286 67 57 chr17 87667206 87667488 -7605163 - B4A SINE B4 -1 291 7 3 1253 277 339 153 28 chr17 87667511 87667760 -7604891 + L2 LINE L2 2394 2673 -746 3 1253 312 368 76 32 chr17 87667936 87668186 -7604465 + MLT1A1-int LTR MaLR 82 342 -1045 3 1253 518 309 96 12 chr17 87669078 87669096 -7603555 - L1ME3A LINE L1 -36 6137 6120 3 1253 914 185 82 26 chr17 87669096 87669290 -7603361 + B3 SINE B2 3 207 -9 3 1253 518 309 96 12 chr17 87669290 87669377 -7603274 - L1ME3A LINE L1 -54 6119 6033 3 1253 993 118 14 7 chr17 87669377 87669522 -7603129 + B1_Mus2 SINE Alu 2 147 0 3 1253 518 309 96 12 chr17 87669522 87669664 -7602987 - L1ME3A LINE L1 -141 6032 5869 3 1253 581 259 15 0 chr17 87669664 87669795 -7602856 - B1_Mur1 SINE Alu -5 144 12 3 1253 298 227 13 0 chr17 87669901 87669976 -7602675 - Lx4A LINE L1 -1340 5718 5643 3 1253 397 38 0 0 chr17 87669996 87670049 -7602602 - MTB_Mm LTR MaLR -17 390 338 3 1253 871 76 15 8 chr17 87670049 87670181 -7602470 - MTB_Mm LTR MaLR -274 133 1 3 1253 268 310 191 21 chr17 87670187 87670375 -7602276 - L1ME3A LINE L1 -487 5686 5467 3 1253 289 265 77 19 chr17 87670418 87670522 -7602129 + MLT1A1 LTR MaLR 1 110 -298 3 1253 290 100 0 0 chr17 87671917 87671957 -7600694 + Lx8 LINE L1 6909 6948 -525 3 1253 485 245 32 19 chr17 87672203 87672357 -7600294 + Lx8 LINE L1 6972 7127 -346 3 1253 1399 238 127 42 chr17 87672463 87672610 -7600041 + Lx9 LINE L1 6187 6331 -1313 3 1253 432 0 0 0 chr17 87672610 87672658 -7599993 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1253 3752 222 106 19 chr17 87672658 87673694 -7598957 + Lx9 LINE L1 6275 7504 -140 3 1253 327 104 0 0 chr17 87673694 87673742 -7598909 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1253 3752 184 104 9 chr17 87673742 87673863 -7598788 + Lx9 LINE L1 7505 7643 -1 3 1253 380 282 145 26 chr17 87673944 87674137 -7598514 + B3 SINE B2 1 216 0 3 1253 285 290 0 12 chr17 87674462 87674555 -7598096 + L1ME3B LINE L1 5975 6136 -104 3 1253 413 274 9 70 chr17 87674717 87674831 -7597820 - PB1D10 SINE Alu -3 114 8 3 1253 788 144 23 17 chr17 87675025 87675202 -7597449 + CT-rich Low_complexity Low_complexity 3 180 0 3 1253 464 342 66 66 chr17 87676901 87677233 -7595418 - ORR1E LTR MaLR 0 359 28 3 1253 1114 52 58 0 chr17 87677935 87678089 -7594562 + B2_Mm2 SINE B2 2 164 -31 3 1253 450 0 0 0 chr17 87678089 87678139 -7594512 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 3 1253 189 0 0 0 chr17 87679258 87679279 -7593372 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 3 1253 256 376 108 34 chr17 87679312 87679896 -7592755 + MER110-int LTR ERV1 398 1024 -3623 3 1253 389 151 46 11 chr17 87680059 87680159 -7592492 + B1_Mur1 SINE Alu 9 144 -5 3 1253 23 68 0 0 chr17 87680381 87680425 -7592226 + AT_rich Low_complexity Low_complexity 1 44 0 3 1253 430 250 0 30 chr17 87680425 87680524 -7592127 - PB1D10 SINE Alu -13 104 9 3 1253 207 232 14 14 chr17 87682230 87682300 -7590351 + (CAG)n Simple_repeat Simple_repeat 3 72 0 3 1253 225 94 0 0 chr17 87682372 87682404 -7590247 + (CTG)n Simple_repeat Simple_repeat 3 34 0 3 1253 289 352 11 0 chr17 87684209 87684300 -7588351 + B1F2 SINE Alu 2 93 -56 3 1253 554 165 30 90 chr17 87684653 87684786 -7587865 + B1_Mur1 SINE Alu 9 134 -16 3 1253 340 331 52 22 chr17 87685430 87685566 -7587085 - RSINE1 SINE B4 -13 152 13 3 1253 198 0 0 0 chr17 87685710 87685732 -7586919 + (TG)n Simple_repeat Simple_repeat 1 22 0 3 1253 505 259 9 0 chr17 87685759 87685871 -7586780 - RSINE1 SINE B4 -43 122 10 3 1253 181 310 84 0 chr17 87687094 87687165 -7585486 + MIRb SINE MIR 132 208 -60 3 1254 342 45 0 0 chr17 87687280 87687324 -7585327 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1254 524 233 90 8 chr17 87687936 87688070 -7584581 - B1_Mur1 SINE Alu 0 149 5 3 1254 335 141 259 0 chr17 87688094 87688179 -7584472 - B1_Mur2 SINE Alu -1 148 42 3 1254 189 74 0 0 chr17 87688327 87688354 -7584297 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 3 1254 228 67 0 0 chr17 87691781 87691811 -7580840 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 1254 226 269 38 25 chr17 87692834 87692914 -7579737 - MIRc SINE MIR -122 146 66 3 1254 279 0 0 0 chr17 87693608 87693639 -7579012 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1254 276 235 0 0 chr17 87694176 87694244 -7578407 + (TG)n Simple_repeat Simple_repeat 2 69 0 3 1254 448 271 172 28 chr17 87694270 87694520 -7578131 - B4 SINE B4 0 292 7 3 1254 461 252 7 73 chr17 87695045 87695091 -7577560 + RSINE1 SINE B4 9 47 -118 3 1254 2077 156 88 0 chr17 87695091 87695444 -7577207 - ORR1C2 LTR MaLR 0 384 1 3 1254 461 252 7 73 chr17 87695444 87695534 -7577117 + RSINE1 SINE B4 48 136 -29 3 1254 491 264 56 130 chr17 87698996 87699137 -7573514 - MTEb LTR MaLR -4 375 246 3 1254 1965 112 101 0 chr17 87699137 87699433 -7573218 - ORR1A3 LTR MaLR 0 326 1 3 1254 491 299 84 98 chr17 87699433 87699618 -7573033 - MTEb LTR MaLR -134 245 1 3 1254 219 371 17 25 chr17 87700114 87700233 -7572418 + ID_B1 SINE B4 42 159 -65 3 1254 243 364 36 27 chr17 87700161 87700271 -7572380 + PB1D10 SINE Alu 6 116 -1 3 1254 772 225 152 0 chr17 87700295 87700486 -7572165 + ID_B1 SINE B4 2 221 -3 3 1254 1221 16 16 31 chr17 87700502 87700761 -7571890 + (CA)n Simple_repeat Simple_repeat 1 254 0 3 1254 467 260 63 0 chr17 87700867 87700994 -7571657 + ID_B1 SINE B4 89 223 -1 3 1254 364 252 53 18 chr17 87701032 87701145 -7571506 - L1MB2 LINE L1 -89 6082 5966 3 1254 1206 48 0 7 chr17 87701200 87701338 -7571313 + B1_Mus1 SINE Alu 2 139 -9 3 1254 285 51 0 0 chr17 87701338 87701377 -7571274 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 1254 285 98 0 0 chr17 87701386 87701427 -7571224 + (GGA)n Simple_repeat Simple_repeat 3 43 0 3 1254 624 168 17 17 chr17 87702285 87702400 -7570251 + B3 SINE B2 5 119 -97 3 1254 575 167 39 0 chr17 87702395 87702497 -7570154 - B3 SINE B2 -110 106 1 3 1254 206 246 0 44 chr17 87702524 87702592 -7570059 + (TATG)n Simple_repeat Simple_repeat 2 66 0 3 1254 440 282 237 16 chr17 87703100 87703357 -7569294 - MTEb LTR MaLR -3 376 63 3 1254 386 196 9 0 chr17 87704830 87704942 -7567709 + GA-rich Low_complexity Low_complexity 1 113 0 3 1254 393 22 0 0 chr17 87704978 87705024 -7567627 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1254 399 21 0 0 chr17 87705364 87705412 -7567239 + (TTG)n Simple_repeat Simple_repeat 2 49 0 3 1254 388 310 8 41 chr17 87705415 87705536 -7567115 - PB1D10 SINE Alu 0 117 1 3 1254 943 196 108 0 chr17 87705559 87705753 -7566898 - B3 SINE B2 0 216 2 3 1254 471 92 270 18 chr17 87706571 87706682 -7565969 - B2_Mm2 SINE B2 -10 185 47 3 1254 207 0 0 0 chr17 87706699 87706722 -7565929 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 3 1254 1105 101 6 0 chr17 87706722 87706880 -7565771 - B2_Mm1t SINE B2 -33 160 2 3 1254 260 274 34 45 chr17 87707300 87707388 -7565263 - MIR SINE MIR -71 191 105 3 1254 362 333 48 0 chr17 87707564 87707711 -7564940 - MER20 DNA MER1_type -1 218 65 3 1254 235 398 70 6 chr17 87708563 87708735 -7563916 - MER21B LTR ERV1 -229 634 452 3 1254 186 103 0 0 chr17 87709143 87709172 -7563479 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 3 1254 277 291 25 12 chr17 87709910 87709990 -7562661 + MER21B LTR ERV1 229 309 -554 3 1254 1339 87 16 42 chr17 87710222 87710415 -7562236 - B2_Mm2 SINE B2 -7 188 1 3 1254 312 27 0 0 chr17 87710704 87710741 -7561910 + (TTG)n Simple_repeat Simple_repeat 2 38 0 3 1254 288 77 0 0 chr17 87711036 87711075 -7561576 + (TTCA)n Simple_repeat Simple_repeat 4 42 0 3 1254 830 161 0 21 chr17 87711165 87711305 -7561346 - B1_Mur2 SINE Alu -8 141 5 3 1254 225 328 62 39 chr17 87711517 87711647 -7561004 - MIR SINE MIR -37 225 93 3 1254 407 271 19 12 chr17 87711710 87711814 -7560837 - ID_B1 SINE B4 -43 181 82 3 1254 415 232 44 18 chr17 87713510 87713624 -7559027 - MER20 DNA MER1_type -48 171 55 3 1254 183 100 0 0 chr17 87715065 87715095 -7557556 + (CAAT)n Simple_repeat Simple_repeat 2 31 0 3 1254 210 338 28 14 chr17 87716141 87716213 -7556438 - ID4 SINE ID -4 79 7 3 1254 492 18 0 0 chr17 87716237 87716294 -7556357 + (GA)n Simple_repeat Simple_repeat 1 57 0 3 1254 510 194 63 16 chr17 87716294 87716409 -7556242 - ID_B1 SINE B4 -12 212 91 3 1254 740 137 17 0 chr17 87716296 87716413 -7556238 - B1_Mur4 SINE Alu -25 125 7 3 1254 1414 281 57 23 chr17 87717661 87718101 -7554550 - Lx8 LINE L1 -83 7390 6936 3 1254 300 214 131 0 chr17 87718121 87718205 -7554446 - B3 SINE B2 0 216 122 3 1254 1178 68 0 14 chr17 87718205 87718353 -7554298 + B1_Mus2 SINE Alu 1 146 -1 3 1254 540 81 0 0 chr17 87718370 87718444 -7554207 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 4 1254 567 161 32 0 chr17 87718453 87718546 -7554105 - B3A SINE B2 -102 96 1 3 1254 321 220 0 0 chr17 87718546 87718603 -7554048 - B3A SINE B2 -141 57 1 4 1254 184 299 14 56 chr17 87718604 87718675 -7553976 - MER5A DNA MER1_type -115 74 7 4 1254 1143 66 0 0 chr17 87718907 87719044 -7553607 + B1_Mus2 SINE Alu 1 137 -10 4 1254 240 35 0 0 chr17 87719044 87719073 -7553578 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1254 316 367 89 19 chr17 87720126 87720340 -7552311 + MER112 DNA MER1_type 8 236 -25 4 1254 830 167 49 60 chr17 87721126 87721311 -7551340 - B2_Mm2 SINE B2 -11 184 2 4 1254 342 309 40 0 chr17 87722893 87723019 -7549632 + MIRc SINE MIR 17 147 -121 4 1254 452 307 9 0 chr17 87723058 87723172 -7549479 - L2a LINE L2 -16 3410 3296 4 1254 850 162 0 7 chr17 87723246 87723383 -7549268 - B1_Mur1 SINE Alu -8 141 6 4 1254 338 319 157 14 chr17 87723427 87723567 -7549084 - RSINE1 SINE B4 -4 161 2 4 1254 213 242 65 0 chr17 87724390 87724452 -7548199 + MIRc SINE MIR 96 161 -107 4 1254 1367 91 261 12 chr17 87724477 87724728 -7547923 - ORR1A2 LTR MaLR -8 319 6 4 1254 574 207 23 14 chr17 87727369 87727586 -7545065 + C-rich Low_complexity Low_complexity 1 218 0 4 1254 275 313 113 15 chr17 87728904 87729037 -7543614 + MIR SINE MIR 61 206 -56 4 1254 185 119 24 0 chr17 87730786 87730828 -7541823 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1254 201 121 0 0 chr17 87731487 87731520 -7541131 + (GGGTG)n Simple_repeat Simple_repeat 4 36 0 4 1254 261 75 0 0 chr17 87731853 87731893 -7540758 + (TCTG)n Simple_repeat Simple_repeat 2 41 0 4 1254 188 289 326 0 chr17 87732704 87732839 -7539812 + MIR SINE MIR 6 184 -78 4 1254 1135 222 19 0 chr17 87735189 87735401 -7537250 - B3 SINE B2 0 216 1 4 1254 225 315 116 36 chr17 87735849 87736071 -7536580 + MIRb SINE MIR 6 245 -23 4 1254 239 321 0 45 chr17 87736636 87736724 -7535927 + MIR SINE MIR 39 122 -140 4 1254 280 353 75 0 chr17 87737032 87737165 -7535486 - MIRb SINE MIR -4 264 122 4 1254 1752 153 12 42 chr17 87738080 87738413 -7534238 - ORR1A3 LTR MaLR -3 323 1 4 1254 1095 163 113 0 chr17 87740607 87740810 -7531841 + URR1A DNA MER1_type 1 226 0 4 1254 496 246 64 21 chr17 87742203 87742344 -7530307 + B1F SINE Alu 1 147 -2 4 1254 345 217 0 28 chr17 87743564 87743635 -7529016 + ID4_ SINE ID 15 83 0 4 1254 691 150 122 82 chr17 87744395 87744591 -7528060 + URR1A DNA MER1_type 22 225 -1 4 1254 262 299 101 124 chr17 87744591 87744658 -7527993 - CYRA11_Mm Unknown Y-chromosome -249 364 108 4 1254 23 0 0 0 chr17 87747073 87747096 -7525555 + AT_rich Low_complexity Low_complexity 1 23 0 4 1254 408 351 20 33 chr17 87747096 87747249 -7525402 - RSINE1 SINE B4 -14 151 1 4 1254 1451 87 0 20 chr17 87747264 87747463 -7525188 - B2_Mm2 SINE B2 0 195 1 4 1254 227 242 61 0 chr17 87748343 87748409 -7524242 + Charlie24 DNA MER1_type 2365 2434 -16 4 1254 188 35 35 0 chr17 87748490 87748519 -7524132 + (CCCCCA)n Simple_repeat Simple_repeat 6 35 0 4 1254 463 234 37 18 chr17 87752611 87752720 -7519931 - PB1D10 SINE Alu -2 115 5 4 1254 183 390 0 24 chr17 87752870 87752954 -7519697 - MIR SINE MIR -54 208 127 4 1254 567 268 174 72 chr17 87755388 87755722 -7516929 - RLTR9A LTR ERVK 0 368 1 4 1254 315 250 216 0 chr17 87756547 87756663 -7515988 + B1F SINE Alu 2 142 -7 4 1254 310 227 0 70 chr17 87756753 87756824 -7515827 - RMER5 LTR ERV1 0 534 469 4 1254 1076 223 8 21 chr17 87756812 87757046 -7515605 - RMER5 LTR ERV1 -296 238 8 4 1254 421 328 8 0 chr17 87757096 87757221 -7515430 + ID_B1 SINE B4 97 222 -2 4 1254 267 245 38 11 chr17 87758849 87758944 -7513707 - MIR SINE MIR -137 131 27 4 1254 1479 117 13 22 chr17 87758997 87759224 -7513427 - URR1B DNA MER1_type 0 225 1 4 1254 866 116 7 0 chr17 87759681 87759819 -7512832 + (CA)n Simple_repeat Simple_repeat 1 139 0 4 1254 234 0 0 0 chr17 87760031 87760057 -7512594 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1254 1400 75 10 36 chr17 87762017 87762210 -7510441 - B2_Mm2 SINE B2 -6 189 2 4 1254 1172 58 0 0 chr17 87763142 87763280 -7509371 - B1_Mus1 SINE Alu -9 139 2 4 1254 320 395 102 41 chr17 87764698 87764991 -7507660 - MLT1J LTR MaLR -174 338 28 4 1254 600 73 0 0 chr17 87765498 87765580 -7507071 + (CA)n Simple_repeat Simple_repeat 2 83 0 4 1254 288 0 0 0 chr17 87766072 87766104 -7506547 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1254 1072 175 11 5 chr17 87766326 87766516 -7506135 - URR1A DNA MER1_type -9 217 27 4 1254 315 0 0 0 chr17 87767193 87767228 -7505423 + (GCTG)n Simple_repeat Simple_repeat 2 36 0 4 1254 405 0 0 0 chr17 87768951 87768996 -7503655 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1254 266 321 105 15 chr17 87769511 87769644 -7503007 + MIR SINE MIR 84 228 -34 4 1254 216 0 0 0 chr17 87770240 87770264 -7502387 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 1254 232 312 0 15 chr17 87770328 87770393 -7502258 + RMER2 LTR ERV1 389 452 -115 4 1254 383 306 92 6 chr17 87771966 87772140 -7500511 + MIRc SINE MIR 30 218 -50 4 1254 257 340 147 6 chr17 87772840 87772997 -7499654 + MIRc SINE MIR 49 227 -41 4 1254 431 287 5 54 chr17 87773662 87773846 -7498805 + G-rich Low_complexity Low_complexity 3 177 0 4 1254 261 227 0 43 chr17 87773865 87774240 -7498411 + GA-rich Low_complexity Low_complexity 1 358 0 4 1254 568 0 28 0 chr17 87775786 87775858 -7496793 + (TG)n Simple_repeat Simple_repeat 2 75 0 4 1254 185 330 116 27 chr17 87776900 87776945 -7495706 - MIRb SINE MIR -84 184 127 4 1254 222 37 0 0 chr17 87776945 87776972 -7495679 + (CCCCCT)n Simple_repeat Simple_repeat 2 28 0 4 1254 185 330 116 27 chr17 87776972 87777038 -7495613 - MIRb SINE MIR -142 126 63 4 1254 422 229 6 107 chr17 87777207 87777349 -7495302 - PB1 SINE Alu -1 148 1 4 1254 372 287 30 44 chr17 87777349 87777375 -7495276 - ID SINE ID -140 84 61 4 1254 207 72 23 45 chr17 87777447 87777491 -7495160 + (CACCC)n Simple_repeat Simple_repeat 4 46 0 4 1254 293 127 36 0 chr17 87780837 87780892 -7491759 + (TATATG)n Simple_repeat Simple_repeat 4 60 0 4 1254 312 198 11 80 chr17 87782026 87782114 -7490537 - ID4_ SINE ID -1 82 1 4 1254 368 252 70 10 chr17 87782122 87782222 -7490429 - ID_B1 SINE B4 -4 220 115 4 1254 395 38 0 19 chr17 87782653 87782707 -7489944 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 1254 354 174 34 40 chr17 87783159 87783256 -7489395 + MIR SINE MIR 65 164 -112 4 1254 718 256 14 19 chr17 87784576 87784835 -7487816 + L1M4 LINE L1 4858 5115 -1025 4 1254 302 263 171 13 chr17 87784893 87785051 -7487600 + L1M4 LINE L1 5593 5775 -396 4 1254 234 0 0 0 chr17 87785051 87785077 -7487574 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1254 492 167 4 11 chr17 87785680 87785770 -7486881 - B1_Mus2 SINE Alu -1 146 33 4 1254 200 128 0 25 chr17 87785771 87785811 -7486840 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1254 1007 119 14 0 chr17 87785935 87786078 -7486573 + B1_Mur4 SINE Alu 6 150 0 4 1254 391 314 55 71 chr17 87785939 87786121 -7486530 + B4A SINE B4 94 272 -20 4 1254 198 0 0 0 chr17 87786277 87786299 -7486352 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 1254 180 77 0 0 chr17 87786745 87786771 -7485880 + (G)n Simple_repeat Simple_repeat 1 26 0 4 1254 185 283 30 91 chr17 87786895 87786961 -7485690 + L2b LINE L2 3304 3365 -10 4 1254 198 0 0 0 chr17 87787248 87787270 -7485381 + (GGGTG)n Simple_repeat Simple_repeat 5 26 0 4 1254 324 270 90 0 chr17 87787327 87787438 -7485213 - B4A SINE B4 -8 284 164 4 1254 852 105 0 20 chr17 87787563 87787709 -7484942 + (CATATA)n Simple_repeat Simple_repeat 1 143 0 4 1254 396 0 0 0 chr17 87787800 87787844 -7484807 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1254 337 230 26 50 chr17 87789566 87789662 -7482989 - B3A SINE B2 -120 96 3 4 1254 435 231 26 0 chr17 87789662 87789734 -7482917 - B1_Mur4 SINE Alu -75 75 2 4 1254 286 256 192 0 chr17 87789972 87790050 -7482601 + PB1D10 SINE Alu 12 104 -13 4 1254 527 323 83 29 chr17 87790065 87790342 -7482309 + B4A SINE B4 1 292 0 4 1254 496 155 0 34 chr17 87790352 87790499 -7482152 + (CA)n Simple_repeat Simple_repeat 1 142 0 4 1254 373 343 38 25 chr17 87791648 87791887 -7480764 + MER52-int LTR ERV1 5644 5885 -1206 4 1254 1085 152 102 30 chr17 87791973 87792170 -7480481 + URR1A DNA MER1_type 5 215 -11 4 1254 548 250 71 22 chr17 87792557 87792741 -7479910 + RLTR42-int LTR ERVK 4257 4449 -1073 4 1254 386 53 18 0 chr17 87793157 87793214 -7479437 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 1254 886 253 52 5 chr17 87793272 87793463 -7479188 - B3 SINE B2 -10 206 7 4 1254 629 227 0 11 chr17 87793476 87793654 -7478997 + (CATA)n Simple_repeat Simple_repeat 3 178 0 4 1254 422 175 111 26 chr17 87793714 87793748 -7478903 - B1_Mur3 SINE Alu -20 129 84 4 1254 180 0 0 0 chr17 87793748 87793768 -7478883 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 1254 432 164 12 37 chr17 87793768 87793850 -7478801 - PB1D9 SINE Alu -38 82 3 4 1254 364 146 11 11 chr17 87794193 87794283 -7478368 + (CA)n Simple_repeat Simple_repeat 1 90 0 4 1254 769 113 7 7 chr17 87794305 87794447 -7478204 + (CA)n Simple_repeat Simple_repeat 1 142 0 4 1254 369 43 0 0 chr17 87794845 87794892 -7477759 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1254 2235 124 118 3 chr17 87794892 87795265 -7477386 - MTC LTR MaLR -5 416 1 4 1254 482 307 120 58 chr17 87795931 87796256 -7476395 + MLT1C LTR MaLR 40 384 -83 5 1254 315 352 102 44 chr17 87796408 87796634 -7476017 + MLT1J LTR MaLR 21 259 -253 5 1254 902 157 14 0 chr17 87796748 87796888 -7475763 + B1_Mus2 SINE Alu 1 142 -5 5 1254 687 201 112 132 chr17 87797356 87797425 -7475226 + MTC-int LTR MaLR 956 1010 -248 5 1254 2437 65 0 0 chr17 87797425 87797735 -7474916 - L1_Mus1 LINE L1 0 6567 6258 5 1254 687 201 112 132 chr17 87797735 87797969 -7474682 + MTC-int LTR MaLR 1011 1253 -5 5 1254 593 220 368 40 chr17 87797973 87798290 -7474361 + MTC LTR MaLR 1 421 0 5 1254 289 263 0 0 chr17 87798313 87798370 -7474281 + MLT1C LTR MaLR 533 589 -6 5 1254 378 259 82 159 chr17 87799234 87799270 -7473381 - B2_Mm2 SINE B2 -3 192 149 5 1254 282 73 0 0 chr17 87799270 87799311 -7473340 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1254 575 238 7 128 chr17 87799311 87799438 -7473213 - B3 SINE B2 -47 148 33 5 1254 4968 43 2 0 chr17 87799438 87800023 -7472628 - L1Md_F2 LINE L1 0 6582 5997 5 1254 575 236 0 125 chr17 87800023 87800065 -7472586 - B3 SINE B2 -184 32 2 5 1254 411 21 0 0 chr17 87800067 87800115 -7472536 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 5 1254 541 255 0 9 chr17 87800115 87800222 -7472429 - B1_Mur1 SINE Alu -12 137 32 5 1254 529 280 15 28 chr17 87800414 87800576 -7472075 - ID_B1 SINE B4 -56 236 82 5 1254 235 340 6 100 chr17 87800429 87800599 -7472052 + YREP_Mm Unknown Unknown 181 334 -1478 5 1254 300 233 0 0 chr17 87800660 87800720 -7471931 - ID4 SINE ID -9 74 15 5 1254 290 296 0 0 chr17 87800932 87801003 -7471648 - ID_B1 SINE B4 -25 199 129 5 1254 1146 50 0 5 chr17 87801169 87801326 -7471325 + L1_Mm LINE L1 5529 5685 -198 5 1254 23 0 0 0 chr17 87801682 87801705 -7470946 + AT_rich Low_complexity Low_complexity 1 23 0 5 1254 838 171 14 14 chr17 87802067 87802209 -7470442 + B1_Mur1 SINE Alu 3 144 -5 5 1254 1242 113 11 6 chr17 87802274 87802452 -7470199 + B2_Mm1t SINE B2 1 179 -14 5 1254 294 175 24 52 chr17 87802503 87802650 -7470001 + B3 SINE B2 47 195 0 5 1254 1215 199 153 21 chr17 87803055 87803394 -7469257 + ORR1C2 LTR MaLR 1 384 0 5 1254 333 286 19 9 chr17 87803424 87803530 -7469121 + ID_B1 SINE B4 115 221 -3 5 1254 1404 98 5 0 chr17 87803857 87804051 -7468600 + B2_Mm2 SINE B2 1 195 0 5 1254 369 216 144 0 chr17 87804159 87804256 -7468395 + PB1D7 SINE Alu 10 120 0 5 1254 336 282 84 17 chr17 87804280 87804399 -7468252 + RSINE1 SINE B4 3 129 -36 5 1254 354 277 144 51 chr17 87804559 87804677 -7467974 + RSINE1 SINE B4 36 164 -1 5 1254 1173 78 0 0 chr17 87804741 87804883 -7467768 - B1_Mus1 SINE Alu -5 143 2 5 1254 1279 232 94 70 chr17 87805716 87805920 -7466731 + MTC LTR MaLR 1 213 -208 5 1254 982 91 19 7 chr17 87805920 87806075 -7466576 + (GGGGA)n Simple_repeat Simple_repeat 5 161 0 5 1254 1279 232 94 70 chr17 87806075 87806273 -7466378 + MTC LTR MaLR 214 413 -8 5 1254 494 316 29 0 chr17 87806353 87806492 -7466159 - B4A SINE B4 -147 145 3 5 1254 390 241 0 0 chr17 87806498 87806581 -7466070 - HAL1 LINE L1 -861 1646 1564 5 1254 316 251 29 60 chr17 87806942 87807047 -7465604 - PB1 SINE Alu -89 222 26 5 1254 1017 128 0 0 chr17 87808669 87808810 -7463841 + B1_Mur4 SINE Alu 1 141 -9 5 1254 1225 41 7 0 chr17 87809174 87809319 -7463332 + B1_Mm SINE Alu 2 147 0 5 1254 189 0 0 0 chr17 87809319 87809340 -7463311 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1254 472 213 135 63 chr17 87809340 87809509 -7463142 + B3A SINE B2 36 214 -2 5 1254 260 274 88 8 chr17 87809510 87809635 -7463016 - L1MA8 LINE L1 -94 6197 6063 5 1254 393 280 0 16 chr17 87809635 87809762 -7462889 - BC1_Mm scRNA scRNA -27 125 1 5 1254 685 74 50 0 chr17 87809797 87809918 -7462733 + (TATG)n Simple_repeat Simple_repeat 2 128 0 5 1254 659 336 64 79 chr17 87810035 87810439 -7462212 + MTE-int LTR MaLR 8 405 -1175 5 1254 469 289 82 0 chr17 87811003 87811138 -7461513 - B1_Mur2 SINE Alu -2 147 2 5 1254 919 219 101 4 chr17 87811245 87811388 -7461263 - L1MC1 LINE L1 -110 6223 6062 5 1254 188 34 0 33 chr17 87811388 87811418 -7461233 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1254 919 219 101 4 chr17 87811418 87811531 -7461120 - L1MC1 LINE L1 -272 6061 5942 5 1254 239 230 356 0 chr17 87812137 87812224 -7460427 + ID_B1 SINE B4 7 124 -100 5 1254 231 342 0 13 chr17 87812220 87812297 -7460354 - YREP_Mm Unknown Unknown -1551 261 186 5 1254 463 336 58 9 chr17 87812356 87812581 -7460070 - L1MC1 LINE L1 -410 5923 5688 5 1254 228 333 40 13 chr17 87812636 87812712 -7459939 - MLT1G3 LTR MaLR -155 440 363 5 1254 245 289 78 94 chr17 87812749 87812940 -7459711 - L1MD LINE L1 -2504 5491 5304 5 1254 267 221 0 128 chr17 87812967 87813045 -7459606 - RSINE1 SINE B4 0 165 98 5 1254 988 250 10 14 chr17 87813172 87813379 -7459272 - B3 SINE B2 -10 206 1 5 1254 327 292 199 45 chr17 87813452 87813653 -7458998 - L1MCa LINE L1 -4262 2246 2015 5 1254 210 319 0 14 chr17 87813653 87813723 -7458928 + PB1D10 SINE Alu 25 93 -24 5 1254 378 279 77 49 chr17 87813665 87813719 -7458932 + B4 SINE B4 24 81 -211 5 1254 556 125 0 43 chr17 87813719 87813811 -7458840 + B1_Mur3 SINE Alu 1 88 -61 5 1254 231 298 96 32 chr17 87813811 87813967 -7458684 - L1MCa LINE L1 -4517 1991 1826 5 1254 436 272 17 17 chr17 87813978 87814094 -7458557 + PB1D10 SINE Alu 1 116 -1 5 1254 688 274 42 67 chr17 87814216 87814243 -7458408 - B4A SINE B4 0 292 270 5 1254 261 98 0 0 chr17 87814243 87814284 -7458367 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1254 688 274 42 67 chr17 87814284 87814495 -7458156 - B4A SINE B4 -23 269 60 5 1254 344 213 158 31 chr17 87814495 87814723 -7457928 - L1MCa LINE L1 -4806 1702 1446 5 1254 284 321 73 0 chr17 87814840 87814949 -7457702 - L1MCa LINE L1 -5334 1174 1058 5 1254 633 175 6 12 chr17 87814949 87815117 -7457534 + (TG)n Simple_repeat Simple_repeat 1 167 0 5 1254 684 182 6 11 chr17 87815132 87815310 -7457341 + (TG)n Simple_repeat Simple_repeat 1 177 0 5 1254 231 61 0 0 chr17 87815325 87815358 -7457293 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 1254 333 343 28 9 chr17 87815370 87815476 -7457175 - RSINE1 SINE B4 -15 150 43 5 1254 216 0 0 0 chr17 87815753 87815777 -7456874 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1254 1154 51 0 0 chr17 87815777 87815914 -7456737 - B1_Mus1 SINE Alu -9 139 3 5 1254 22 0 0 0 chr17 87815918 87815940 -7456711 + AT_rich Low_complexity Low_complexity 1 22 0 5 1254 394 260 0 20 chr17 87818048 87818146 -7454505 + MER20 DNA MER1_type 30 125 -94 5 1255 767 209 0 69 chr17 87819815 87819974 -7452677 - B1_Mur2 SINE Alu -1 148 1 5 1255 309 271 70 40 chr17 87819976 87820076 -7452575 - PB1D10 SINE Alu -13 104 2 5 1255 1260 109 16 10 chr17 87820476 87820670 -7451981 + B2_Mm2 SINE B2 1 195 0 5 1255 1191 70 0 0 chr17 87820767 87820925 -7451726 + (TG)n Simple_repeat Simple_repeat 2 159 0 5 1255 321 89 0 0 chr17 87820997 87821042 -7451609 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1255 303 28 0 0 chr17 87821113 87821149 -7451502 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1255 411 73 0 0 chr17 87821221 87821276 -7451375 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1255 384 119 0 0 chr17 87821348 87821407 -7451244 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 1255 321 89 0 0 chr17 87821479 87821524 -7451127 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1255 508 184 121 17 chr17 87821552 87821668 -7450983 - B3A SINE B2 -62 136 9 5 1255 351 0 0 0 chr17 87821763 87821802 -7450849 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1255 35 41 0 0 chr17 87822195 87822244 -7450407 + AT_rich Low_complexity Low_complexity 1 49 0 5 1255 654 116 42 0 chr17 87822286 87822381 -7450270 - PB1D9 SINE Alu 0 120 22 5 1255 930 261 10 0 chr17 87822381 87822580 -7450071 - B3 SINE B2 -15 201 1 5 1255 582 265 153 26 chr17 87822604 87822794 -7449857 - B3 SINE B2 0 216 3 5 1255 553 194 65 0 chr17 87822945 87823053 -7449598 + B2_Mm2 SINE B2 79 193 -2 5 1255 476 247 0 0 chr17 87823090 87823183 -7449468 + B1_Mur1 SINE Alu 56 148 -1 5 1255 212 243 127 14 chr17 87823289 87823360 -7449291 - B4 SINE B4 -212 80 2 5 1255 1470 44 66 0 chr17 87823499 87823680 -7448971 + B2_Mm2 SINE B2 2 194 -1 5 1255 2240 123 97 52 chr17 87824007 87824157 -7448494 + MTC LTR MaLR 2 179 -242 5 1255 1387 80 21 0 chr17 87824157 87824345 -7448306 - B2_Mm2 SINE B2 -2 193 2 5 1255 2240 123 97 52 chr17 87824345 87824596 -7448055 + MTC LTR MaLR 180 421 0 5 1255 645 124 87 17 chr17 87825411 87825526 -7447125 + B1_Mur1 SINE Alu 6 128 -21 5 1255 266 289 48 112 chr17 87825435 87825622 -7447029 + RLTR25B LTR ERVK 439 613 -415 5 1255 685 250 6 62 chr17 87825583 87825620 -7447031 + ID_B1 SINE B4 56 222 0 5 1255 1137 50 0 0 chr17 87825620 87825760 -7446891 + B1_Mus1 SINE Alu 9 148 0 5 1255 180 0 0 0 chr17 87825762 87825782 -7446869 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1255 814 96 15 0 chr17 87825782 87825917 -7446734 + (GA)n Simple_repeat Simple_repeat 2 138 0 5 1255 1094 144 0 41 chr17 87827528 87827564 -7445087 - B2_Mm2 SINE B2 -7 188 154 5 1255 333 0 0 0 chr17 87827564 87827601 -7445050 + (TATG)n Simple_repeat Simple_repeat 4 40 0 5 1255 1094 144 0 41 chr17 87827601 87827760 -7444891 - B2_Mm2 SINE B2 -42 153 1 5 1255 345 47 0 0 chr17 87827762 87827805 -7444846 + (TCCC)n Simple_repeat Simple_repeat 4 46 0 5 1255 979 149 24 24 chr17 87827825 87827990 -7444661 - B2_Mm2 SINE B2 -30 165 1 5 1255 212 305 154 28 chr17 87828003 87828185 -7444466 - MIRb SINE MIR -52 216 12 5 1255 3043 35 3 5 chr17 87828209 87828585 -7444066 + MT-int LTR MaLR 651 1025 -73 5 1255 963 233 39 19 chr17 87828640 87828846 -7443805 + B3 SINE B2 5 214 -2 5 1255 365 320 43 56 chr17 87828850 87829012 -7443639 + RSINE1 SINE B4 1 160 -5 5 1255 1022 194 15 30 chr17 87829104 87829306 -7443345 + B3 SINE B2 5 203 -13 5 1255 223 239 75 54 chr17 87829505 87829598 -7443053 - RSINE1 SINE B4 -69 96 2 5 1255 241 338 0 24 chr17 87829642 87829724 -7442927 - PB1D10 SINE Alu -37 80 1 5 1255 385 222 74 0 chr17 87830605 87830686 -7441965 + B3 SINE B2 1 87 -129 5 1255 234 194 14 127 chr17 87831063 87831134 -7441517 + ID_B1 SINE B4 56 118 -106 6 1255 1155 43 0 28 chr17 87831512 87831656 -7440995 + B1_Mus1 SINE Alu 1 140 -8 6 1255 518 225 152 47 chr17 87832213 87832404 -7440247 + B3 SINE B2 3 213 -3 6 1255 475 179 9 86 chr17 87832482 87832598 -7440053 - B1_Mur1 SINE Alu 0 149 43 6 1255 290 232 14 14 chr17 87833581 87833651 -7439000 + ID4 SINE ID 1 70 -13 6 1255 755 111 36 36 chr17 87833677 87833817 -7438834 - BC1_Mm scRNA scRNA -12 140 1 6 1255 560 129 32 0 chr17 87834652 87834745 -7437906 + B1_Mus2 SINE Alu 41 136 -11 6 1255 200 271 64 6 chr17 87837207 87837363 -7435288 + (CA)n Simple_repeat Simple_repeat 1 165 0 6 1255 1122 44 15 0 chr17 87838000 87838135 -7434516 + B1_Mus2 SINE Alu 2 138 -9 6 1255 396 159 152 22 chr17 87838346 87838447 -7434204 + PB1D10 SINE Alu 2 114 -3 6 1255 1232 41 0 0 chr17 87838540 87838687 -7433964 - B1_Mus1 SINE Alu 0 148 2 6 1255 998 88 66 0 chr17 87839972 87840109 -7432542 - B1_Mus1 SINE Alu 0 148 3 6 1255 279 0 0 0 chr17 87840259 87840290 -7432361 + (A)n Simple_repeat Simple_repeat 1 31 0 6 1255 236 250 0 111 chr17 87840797 87840860 -7431791 + ID4_ SINE ID 19 74 -9 6 1255 298 287 75 56 chr17 87840949 87841056 -7431595 + PB1D10 SINE Alu 2 110 -7 6 1255 270 200 0 0 chr17 87842479 87842524 -7430127 + PB1 SINE Alu 76 120 -7 6 1255 192 97 0 0 chr17 87843134 87843165 -7429486 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 6 1255 850 150 262 6 chr17 87843307 87843475 -7429176 - B3 SINE B2 -5 211 1 6 1255 198 0 0 0 chr17 87845628 87845650 -7427001 + (CCCGG)n Simple_repeat Simple_repeat 4 25 0 6 1255 180 0 0 0 chr17 87845998 87846018 -7426633 + (T)n Simple_repeat Simple_repeat 1 20 0 6 1255 22 0 0 0 chr17 87848072 87848094 -7424557 + AT_rich Low_complexity Low_complexity 1 22 0 6 1255 380 279 223 7 chr17 87848639 87848787 -7423864 + MER105 DNA DNA 25 204 0 6 1255 294 299 69 30 chr17 87849022 87849153 -7423498 - MLT1A1 LTR MaLR -237 171 36 6 1255 695 247 38 54 chr17 87849183 87849367 -7423284 + B3A SINE B2 2 182 -16 6 1255 404 298 122 65 chr17 87849406 87849731 -7422920 - MLT1A0 LTR MaLR -15 393 1 6 1255 617 256 25 71 chr17 87850571 87850769 -7421882 + B4A SINE B4 104 292 0 6 1255 390 91 0 0 chr17 87850871 87850926 -7421725 + (CCCCCT)n Simple_repeat Simple_repeat 5 59 0 6 1255 697 186 0 23 chr17 87850934 87851066 -7421585 - B1_Mur2 SINE Alu -16 133 5 6 1255 375 265 0 75 chr17 87851066 87851081 -7421570 - ID_B1 SINE B4 -16 208 73 6 1255 1220 48 0 0 chr17 87851159 87851305 -7421346 - B1_Mus1 SINE Alu -2 146 1 6 1255 1991 200 109 56 chr17 87851596 87852334 -7420317 - RMER1B Other Other -11 1055 95 6 1255 636 224 8 46 chr17 87853175 87853192 -7419459 - B1_Mur1 SINE Alu 0 149 137 6 1255 186 43 0 0 chr17 87853192 87853215 -7419436 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1255 636 224 8 46 chr17 87853215 87853328 -7419323 - B1_Mur1 SINE Alu -13 136 24 6 1255 4047 106 45 0 chr17 87853364 87853938 -7418713 - MT2B LTR ERVL -1 600 1 6 1255 751 284 135 34 chr17 87854265 87854791 -7417860 - L1MC4 LINE L1 -646 7396 6818 6 1255 330 26 0 0 chr17 87855390 87855429 -7417222 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1255 886 281 30 0 chr17 87855542 87855741 -7416910 + B3 SINE B2 7 211 -5 6 1255 355 248 93 79 chr17 87856049 87856189 -7416462 + B1F2 SINE Alu 1 142 -7 6 1255 590 260 14 0 chr17 87856817 87856963 -7415688 + B1F1 SINE Alu 1 148 -1 6 1255 23 0 0 0 chr17 87858128 87858151 -7414500 + AT_rich Low_complexity Low_complexity 1 23 0 6 1255 383 273 113 41 chr17 87859053 87859248 -7413403 + MIRb SINE MIR 13 221 -47 6 1255 250 341 68 23 chr17 87859770 87859902 -7412749 - MIRc SINE MIR -24 244 107 6 1255 429 304 24 71 chr17 87860231 87860401 -7412250 + Charlie4z DNA MER1_type 1 162 -5 6 1255 253 278 56 0 chr17 87861591 87861663 -7410988 - MER45C DNA Tip100 -789 164 89 6 1255 421 271 8 69 chr17 87861659 87861790 -7410861 + ID_B1 SINE B4 82 204 -20 6 1255 2662 160 76 22 chr17 87862069 87862217 -7410434 - RLTR24 LTR ERV1 -3 526 365 6 1255 1153 123 0 74 chr17 87862217 87862419 -7410232 - B2_Mm2 SINE B2 -8 187 1 6 1255 2662 160 76 22 chr17 87862419 87862769 -7409882 - RLTR24 LTR ERV1 -165 364 1 6 1255 522 0 0 0 chr17 87863099 87863157 -7409494 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 1255 963 131 14 7 chr17 87863963 87864109 -7408542 - B1_Mur4 SINE Alu -1 149 3 6 1255 266 309 96 0 chr17 87864591 87864685 -7407966 - RSINE1 SINE B4 -12 153 51 6 1255 404 224 62 132 chr17 87864730 87864784 -7407867 - B1_Mur4 SINE Alu -2 148 97 6 1255 3728 43 0 0 chr17 87864784 87865226 -7407425 - L1Md_F3 LINE L1 -14 6570 6129 6 1255 404 224 62 132 chr17 87865226 87865315 -7407336 - B1_Mur4 SINE Alu -54 96 15 6 1255 420 325 104 10 chr17 87865424 87865617 -7407034 + MIRb SINE MIR 58 268 0 6 1255 408 20 0 0 chr17 87865868 87865917 -7406734 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1255 1169 58 0 0 chr17 87865917 87866055 -7406596 - B1_Mus1 SINE Alu -9 139 2 6 1255 277 315 0 33 chr17 87867122 87867214 -7405437 + MER5B DNA MER1_type 21 109 -69 6 1255 347 331 44 82 chr17 87867234 87867392 -7405259 + ID_B1 SINE B4 48 199 -25 6 1255 253 234 94 0 chr17 87867365 87867429 -7405222 + B1_Mur2 SINE Alu 65 134 -15 6 1255 714 211 2 52 chr17 87867420 87867612 -7405039 - B3 SINE B2 -15 180 6 6 1255 1470 34 45 0 chr17 87867641 87867818 -7404833 - B2_Mm1a SINE B2 -7 186 2 6 1255 266 273 175 30 chr17 87867988 87868154 -7404497 - MIRc SINE MIR -16 252 63 6 1255 624 141 0 0 chr17 87868253 87868388 -7404263 + (GA)n Simple_repeat Simple_repeat 1 135 0 6 1255 500 183 71 48 chr17 87868989 87869115 -7403536 + B1_Mur2 SINE Alu 3 131 -18 6 1255 627 303 99 34 chr17 87869389 87869772 -7402879 + L1MB5 LINE L1 5459 5866 -308 6 1255 297 75 0 0 chr17 87869796 87869836 -7402815 + (CCCCG)n Simple_repeat Simple_repeat 5 44 0 6 1255 183 114 0 0 chr17 87870125 87870160 -7402491 + (T)n Simple_repeat Simple_repeat 1 35 0 6 1255 516 287 18 35 chr17 87870521 87870691 -7401960 + B3 SINE B2 45 211 -5 6 1255 384 210 210 0 chr17 87870795 87870895 -7401756 - RLTR17 LTR ERVK -361 331 211 6 1255 1388 137 0 38 chr17 87870950 87871186 -7401465 - RLTR17 LTR ERVK -465 227 1 6 1255 393 22 0 0 chr17 87871552 87871598 -7401053 + (CCAA)n Simple_repeat Simple_repeat 2 47 0 6 1255 255 258 330 0 chr17 87871721 87871818 -7400833 + RSINE1 SINE B4 2 130 -35 6 1255 214 48 95 0 chr17 87871821 87871863 -7400788 + (TCTCTG)n Simple_repeat Simple_repeat 3 48 0 6 1255 258 56 0 0 chr17 87871863 87871898 -7400753 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 1255 243 0 0 0 chr17 87871899 87871926 -7400725 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 6 1255 473 272 9 0 chr17 87872131 87872245 -7400406 - PB1D10 SINE Alu 0 117 3 6 1255 221 353 43 0 chr17 87872494 87872610 -7400041 - L2 LINE L2 -1295 2124 2004 6 1255 319 329 0 0 chr17 87874484 87874554 -7398097 + ID2 SINE ID 4 73 -10 6 1255 630 39 0 0 chr17 87875329 87875406 -7397245 + (TTCC)n Simple_repeat Simple_repeat 1 77 0 6 1255 194 278 37 0 chr17 87875557 87875611 -7397040 - L2b LINE L2 -7 3368 3313 6 1255 195 285 0 5 chr17 87875638 87875690 -7396961 + MIRb SINE MIR 184 238 -30 6 1255 333 255 60 20 chr17 87875722 87875822 -7396829 + B1F SINE Alu 46 149 0 6 1255 451 223 46 61 chr17 87875824 87876003 -7396648 + B3 SINE B2 27 193 -2 6 1255 21 36 0 0 chr17 87876038 87876066 -7396585 + AT_rich Low_complexity Low_complexity 1 28 0 6 1255 1022 106 28 0 chr17 87876068 87876209 -7396442 + B1_Mus1 SINE Alu 3 147 -1 6 1255 378 0 0 0 chr17 87876280 87876322 -7396329 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1255 404 290 21 0 chr17 87876358 87876451 -7396200 - B4A SINE B4 -112 180 86 6 1255 293 301 16 89 chr17 87876744 87876835 -7395816 - B4A SINE B4 -152 140 59 6 1255 245 171 500 0 chr17 87876835 87876911 -7395740 + URR1A DNA MER1_type 1 114 -112 6 1255 601 177 47 54 chr17 87878188 87878337 -7394314 + B1F SINE Alu 1 148 -1 6 1255 339 342 133 23 chr17 87878443 87878706 -7393945 + L1MD LINE L1 4804 5095 -1051 6 1255 315 89 0 0 chr17 87878722 87878767 -7393884 + L1MB3 LINE L1 6100 6144 -39 6 1255 906 144 14 7 chr17 87878767 87878914 -7393737 + B1_Mur4 SINE Alu 3 150 0 6 1255 396 329 21 14 chr17 87879099 87879244 -7393407 + B1F2 SINE Alu 4 149 0 6 1255 294 129 207 5 chr17 87879255 87879375 -7393276 + L1M4 LINE L1 5160 5316 -830 6 1255 420 278 29 104 chr17 87879380 87879553 -7393098 + RSINE1 SINE B4 6 165 0 6 1255 1422 294 118 36 chr17 87879602 87880431 -7392220 + L1ME1 LINE L1 5282 6178 -1 6 1255 242 261 75 54 chr17 87880476 87880569 -7392082 + MIRb SINE MIR 27 121 -147 6 1255 432 0 0 0 chr17 87880577 87880625 -7392026 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1255 770 161 92 0 chr17 87880640 87880770 -7391881 + B1_Mur2 SINE Alu 3 144 -5 6 1255 1477 78 16 5 chr17 87881480 87881673 -7390978 + B2_Mm2 SINE B2 1 195 0 6 1255 293 320 30 0 chr17 87882856 87882956 -7389695 + MIR SINE MIR 47 149 -113 6 1255 400 257 78 10 chr17 87882967 87883069 -7389582 + PB1D10 SINE Alu 1 109 -8 7 1255 614 263 142 105 chr17 87883414 87883637 -7389014 + L1_Mur3 LINE L1 5209 5434 -446 7 1255 4128 41 6 0 chr17 87883637 87884124 -7388527 + L1Md_T LINE L1 6092 6581 -1 7 1255 614 263 142 105 chr17 87884124 87884423 -7388228 + L1_Mur3 LINE L1 5435 5755 -125 7 1255 222 118 0 0 chr17 87884423 87884457 -7388194 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 1255 614 263 142 105 chr17 87884457 87884523 -7388128 + L1_Mur3 LINE L1 5756 5820 -60 7 1255 534 31 0 0 chr17 87884545 87884609 -7388042 + (TAGA)n Simple_repeat Simple_repeat 2 65 0 7 1255 486 0 0 0 chr17 87884836 87884890 -7387761 + (GGGA)n Simple_repeat Simple_repeat 4 57 0 7 1255 763 163 0 56 chr17 87884905 87885048 -7387603 + B1F2 SINE Alu 1 135 -14 7 1255 315 0 0 0 chr17 87885048 87885083 -7387568 + (CAAA)n Simple_repeat Simple_repeat 4 38 0 7 1255 4102 148 108 64 chr17 87885382 87886246 -7386405 - RMER19B LTR ERVK 0 902 1 7 1255 512 216 252 0 chr17 87886665 87886776 -7385875 + RSINE1 SINE B4 2 140 -25 7 1255 807 196 7 33 chr17 87887791 87887944 -7384707 - B1_Mur3 SINE Alu 0 149 1 7 1255 203 319 83 21 chr17 87888226 87888322 -7384329 + MIR SINE MIR 29 130 -78 7 1255 291 225 12 24 chr17 87888429 87888511 -7384140 + (TA)n Simple_repeat Simple_repeat 1 81 0 7 1255 484 137 14 0 chr17 87888511 87888584 -7384067 - B2_Mm2 SINE B2 -121 74 1 7 1255 483 18 0 0 chr17 87888607 87888663 -7383988 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 1255 347 58 14 68 chr17 87888888 87888962 -7383689 + (TCTCCC)n Simple_repeat Simple_repeat 5 74 0 7 1255 423 314 13 19 chr17 87889445 87889601 -7383050 - RSINE1 SINE B4 -8 157 3 7 1255 189 248 61 114 chr17 87890485 87890599 -7382052 - MIR3 SINE MIR -39 169 62 7 1255 26 0 0 0 chr17 87890602 87890628 -7382023 + AT_rich Low_complexity Low_complexity 1 26 0 7 1255 318 362 79 44 chr17 87892100 87892247 -7380404 + B4 SINE B4 51 197 -95 7 1255 387 0 0 0 chr17 87892247 87892290 -7380361 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1255 318 305 30 88 chr17 87892290 87892401 -7380250 + B4 SINE B4 79 285 -7 7 1255 1779 162 99 126 chr17 87892450 87892686 -7379965 + RLTR41 LTR ERV1 1 211 -235 7 1255 1356 82 5 11 chr17 87892686 87892870 -7379781 + B2_Mm1a SINE B2 1 183 -10 7 1255 1779 162 99 126 chr17 87892870 87893077 -7379574 + RLTR41 LTR ERV1 212 431 -15 7 1255 758 133 0 86 chr17 87893076 87893216 -7379435 + B1_Mur4 SINE Alu 23 150 0 7 1255 424 335 56 11 chr17 87893233 87893279 -7379372 + B3 SINE B2 27 72 -144 7 1255 4247 45 8 12 chr17 87893279 87893793 -7378858 - LTRIS3 LTR ERV1 0 512 1 7 1255 424 335 56 11 chr17 87893793 87893902 -7378749 + B3 SINE B2 73 189 -27 7 1255 216 86 0 0 chr17 87893902 87893937 -7378714 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 7 1255 424 335 56 11 chr17 87893937 87893958 -7378693 + B3 SINE B2 190 210 -6 7 1255 260 207 32 137 chr17 87894360 87894455 -7378196 + PB1D10 SINE Alu 1 85 -32 7 1255 2182 109 105 123 chr17 87894456 87894894 -7377757 - RLTR23 LTR ERV1 0 430 1 7 1255 2060 133 19 58 chr17 87894976 87895336 -7377315 + ORR1B1 LTR MaLR 41 386 -8 7 1255 901 98 0 0 chr17 87895337 87895460 -7377191 + B1_Mur4 SINE Alu 20 142 -8 7 1255 302 0 26 0 chr17 87895463 87895501 -7377150 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 7 1255 406 331 46 0 chr17 87895513 87895643 -7377008 + B1F1 SINE Alu 1 136 -13 7 1255 694 233 193 6 chr17 87896298 87896479 -7376172 + B3 SINE B2 1 215 -1 7 1255 607 152 9 28 chr17 87896544 87896652 -7375999 - B1_Mur4 SINE Alu -1 149 44 7 1255 413 254 90 65 chr17 87896901 87897097 -7375554 + MIR SINE MIR 15 218 -50 7 1255 228 238 0 0 chr17 87897153 87897195 -7375456 + polypurine Low_complexity Low_complexity 4 45 0 7 1255 396 0 0 0 chr17 87898082 87898126 -7374525 + (GA)n Simple_repeat Simple_repeat 1 44 0 7 1255 283 314 75 23 chr17 87898190 87898363 -7374288 - RMER5 LTR ERV1 -278 256 75 7 1255 186 26 50 50 chr17 87898365 87898405 -7374246 + (CAAT)n Simple_repeat Simple_repeat 2 41 0 7 1255 340 273 136 0 chr17 87900211 87900299 -7372352 - PB1D10 SINE Alu -17 100 1 7 1255 531 0 0 0 chr17 87900316 87900375 -7372276 + (TC)n Simple_repeat Simple_repeat 2 60 0 7 1255 264 148 0 0 chr17 87900376 87900437 -7372214 + (TG)n Simple_repeat Simple_repeat 2 62 0 7 1255 239 143 32 0 chr17 87902333 87902396 -7370255 + C-rich Low_complexity Low_complexity 2 66 0 7 1255 924 71 32 84 chr17 87903086 87903240 -7369411 - B1_Mus2 SINE Alu 0 147 2 7 1255 829 153 169 12 chr17 87903255 87903427 -7369224 - ID_B1 SINE B4 0 224 26 7 1255 438 297 211 95 chr17 87903909 87904151 -7368500 - B4A SINE B4 -21 271 2 7 1255 867 184 14 0 chr17 87904186 87904333 -7368318 + B1_Mur2 SINE Alu 1 149 0 7 1255 851 287 123 42 chr17 87904625 87905125 -7367526 - MER34 LTR ERV1 0 542 1 7 1255 222 299 42 56 chr17 87905150 87905221 -7367430 - B1F SINE Alu -3 146 77 7 1255 544 174 111 22 chr17 87905298 87905433 -7367218 - B1_Mus2 SINE Alu 0 147 1 7 1255 363 319 70 67 chr17 87906294 87906548 -7366103 + RMER12 LTR ERVK 770 988 -334 7 1255 486 299 70 61 chr17 87906533 87906839 -7365812 - B4 SINE B4 -11 281 1 7 1255 344 295 187 0 chr17 87907065 87907204 -7365447 + MER45A DNA Tip100 4 168 -10 7 1255 2050 171 5 24 chr17 87909399 87909770 -7362881 + RLTR14 LTR ERV1 1 364 -18 7 1255 4260 122 48 1 chr17 87910226 87910872 -7361779 + RLTR33 LTR ERVK 1 676 -2 7 1255 285 98 0 0 chr17 87912094 87912135 -7360516 + (TTCA)n Simple_repeat Simple_repeat 2 42 0 7 1255 268 125 69 35 chr17 87913967 87914025 -7358626 + PB1D10 SINE Alu 55 114 -3 7 1255 369 294 59 0 chr17 87914382 87914518 -7358133 + B1_Mur3 SINE Alu 1 144 -5 7 1255 919 241 64 0 chr17 87914535 87914702 -7357949 + B3 SINE B2 1 167 -49 7 1255 303 28 0 0 chr17 87914702 87914738 -7357913 + (CATA)n Simple_repeat Simple_repeat 4 39 0 7 1255 919 241 64 0 chr17 87914738 87914773 -7357878 + B3 SINE B2 168 215 -1 7 1255 210 150 0 24 chr17 87915781 87915822 -7356829 + PB1D10 SINE Alu 70 109 -8 7 1255 420 311 83 38 chr17 87915854 87916011 -7356640 + RSINE1 SINE B4 2 165 0 7 1255 648 97 0 0 chr17 87916015 87916108 -7356543 + (CA)n Simple_repeat Simple_repeat 2 94 0 7 1255 269 284 37 0 chr17 87916114 87916195 -7356456 + Lx8 LINE L1 7203 7286 -187 7 1255 336 253 6 27 chr17 87916247 87916430 -7356221 + (CA)n Simple_repeat Simple_repeat 1 179 0 7 1255 32 43 0 0 chr17 87916536 87916582 -7356069 + AT_rich Low_complexity Low_complexity 1 46 0 7 1255 1259 28 0 0 chr17 87917463 87917607 -7355044 + B1_Mus1 SINE Alu 5 148 0 7 1255 315 0 0 0 chr17 87917608 87917643 -7355008 + (CAAT)n Simple_repeat Simple_repeat 2 36 0 7 1255 945 113 41 30 chr17 87918007 87918205 -7354446 + B2_Mm2 SINE B2 1 188 -5 7 1255 293 330 31 10 chr17 87918215 87918313 -7354338 + PB1D10 SINE Alu 17 116 -1 7 1255 36 53 0 0 chr17 87918328 87918385 -7354266 + AT_rich Low_complexity Low_complexity 1 57 0 7 1255 485 274 8 33 chr17 87918397 87918518 -7354133 + ID_B1 SINE B4 88 205 -19 7 1255 486 268 72 78 chr17 87918606 87918772 -7353879 + ID_B1 SINE B4 2 166 -58 7 1255 254 193 159 57 chr17 87918703 87918791 -7353860 + PB1D10 SINE Alu 21 117 0 7 1255 633 270 37 6 chr17 87918806 87918970 -7353681 + B3A SINE B2 5 173 -25 7 1255 885 144 17 0 chr17 87919596 87919770 -7352881 + GA-rich Low_complexity Low_complexity 3 179 0 7 1255 267 206 0 42 chr17 87919776 87919809 -7352842 + polypurine Low_complexity Low_complexity 3 35 0 7 1255 1267 54 0 0 chr17 87919809 87919956 -7352695 + B1_Mus1 SINE Alu 2 148 0 7 1255 267 206 0 42 chr17 87919956 87919993 -7352658 + polypurine Low_complexity Low_complexity 36 70 0 7 1255 1110 125 0 0 chr17 87919999 87920175 -7352476 + (GGA)n Simple_repeat Simple_repeat 2 177 0 7 1255 504 206 88 0 chr17 87920601 87920703 -7351948 + PB1D10 SINE Alu 6 116 -1 7 1255 555 246 100 0 chr17 87920705 87920835 -7351816 + B1_Mur2 SINE Alu 7 149 0 7 1255 1287 0 0 0 chr17 87923359 87923502 -7349149 + (GGGAGA)n Simple_repeat Simple_repeat 2 144 0 7 1255 601 95 27 62 chr17 87923832 87923944 -7348707 + B1_Mus1 SINE Alu 40 147 -1 7 1255 195 65 43 21 chr17 87923944 87923991 -7348660 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 7 1255 319 267 89 153 chr17 87923997 87924200 -7348451 + B3 SINE B2 27 216 0 7 1255 890 202 17 23 chr17 87924888 87925065 -7347586 - URR1B DNA MER1_type -48 177 2 7 1255 587 197 15 0 chr17 87925425 87925557 -7347094 + CT-rich Low_complexity Low_complexity 3 136 0 7 1255 1259 34 0 0 chr17 87925557 87925703 -7346948 - B1_Mus2 SINE Alu 0 147 2 7 1255 331 271 83 18 chr17 87925947 87926056 -7346595 + PB1D10 SINE Alu 1 116 -1 7 1255 878 140 127 154 chr17 87926827 87926867 -7345784 + B3 SINE B2 1 40 -176 7 1255 1244 68 0 0 chr17 87926867 87927015 -7345636 + B1_Mus1 SINE Alu 1 148 0 7 1255 878 140 127 154 chr17 87927015 87927194 -7345457 + B3 SINE B2 41 214 -2 7 1255 492 261 88 22 chr17 87927611 87927748 -7344903 - RSINE1 SINE B4 -17 148 3 7 1255 984 139 0 0 chr17 87927856 87928000 -7344651 + B1_Mus2 SINE Alu 1 144 -3 7 1255 186 103 0 0 chr17 87928405 87928434 -7344217 + (CCCCCG)n Simple_repeat Simple_repeat 2 30 0 7 1255 921 291 111 17 chr17 87928998 87929333 -7343318 - MER34A1 LTR ERV1 -201 386 18 7 1255 198 0 0 0 chr17 87929333 87929355 -7343296 + (TGG)n Simple_repeat Simple_repeat 2 23 0 7 1255 921 291 111 17 chr17 87929355 87929372 -7343279 - MER34A1 LTR ERV1 -570 17 1 7 1255 213 302 49 49 chr17 87930809 87930931 -7341720 + L2 LINE L2 2845 2966 -453 7 1255 200 356 18 30 chr17 87931764 87931929 -7340722 + C-rich Low_complexity Low_complexity 4 166 0 7 1255 304 247 0 58 chr17 87931984 87932087 -7340564 - LTR37B LTR ERV1 -19 449 353 8 1255 279 221 115 13 chr17 87932202 87932280 -7340371 - L1MB4 LINE L1 -119 6061 5976 8 1255 224 111 0 22 chr17 87932391 87932437 -7340214 + (TTTG)n Simple_repeat Simple_repeat 3 47 0 8 1255 395 264 39 69 chr17 87932678 87932808 -7339843 + MTE2b LTR MaLR 3 128 -251 8 1255 394 266 16 124 chr17 87932813 87932891 -7339760 + MTE2b LTR MaLR 60 125 -254 8 1255 1031 116 14 0 chr17 87932891 87933037 -7339614 + B1_Mus1 SINE Alu 1 148 0 8 1255 394 266 16 124 chr17 87933037 87933087 -7339564 + MTE2b LTR MaLR 126 174 -205 8 1255 244 217 140 70 chr17 87933110 87933224 -7339427 + MT2B LTR ERVL 148 269 -332 8 1255 620 144 35 35 chr17 87933141 87933256 -7339395 + B1_Mur2 SINE Alu 35 149 0 8 1255 725 247 32 43 chr17 87933259 87933445 -7339206 + MTE2b LTR MaLR 167 350 -29 8 1255 225 94 0 0 chr17 87933454 87933486 -7339165 + (ATTG)n Simple_repeat Simple_repeat 2 33 0 8 1255 1000 57 0 0 chr17 87933523 87933647 -7339004 - B2_Mm2 SINE B2 -70 125 2 8 1255 857 171 229 0 chr17 87933682 87933852 -7338799 + B3 SINE B2 1 209 -7 8 1255 854 268 49 4 chr17 87933890 87934115 -7338536 + MER2 DNA MER2_type 111 345 0 8 1255 1181 106 24 0 chr17 87934754 87934924 -7337727 + URR1B DNA MER1_type 52 225 0 8 1255 472 254 26 17 chr17 87934940 87935056 -7337595 + MTD LTR MaLR 4 120 -299 8 1255 495 0 0 0 chr17 87935057 87935112 -7337539 + (TCCC)n Simple_repeat Simple_repeat 4 58 0 8 1255 410 53 0 17 chr17 87935112 87935170 -7337481 + (TTTC)n Simple_repeat Simple_repeat 2 58 0 8 1255 734 146 90 23 chr17 87935174 87935307 -7337344 - B1_Mus2 SINE Alu -1 146 5 8 1255 1426 123 164 0 chr17 87935310 87935578 -7337073 + MTD LTR MaLR 105 416 -3 8 1255 313 238 59 10 chr17 87935755 87935857 -7336794 + MIR3 SINE MIR 64 170 -38 8 1255 237 220 0 119 chr17 87936119 87936186 -7336465 + Arthur1C DNA Tip100 296 354 -9 8 1255 316 171 12 12 chr17 87936480 87936563 -7336088 + CT-rich Low_complexity Low_complexity 1 83 0 8 1255 524 270 0 0 chr17 87936564 87936675 -7335976 - PB1D10 SINE Alu -6 111 1 8 1255 1216 56 0 0 chr17 87937100 87937244 -7335407 - B1_Mus2 SINE Alu -2 145 2 8 1255 326 204 0 0 chr17 87938043 87938097 -7334554 + RSINE1 SINE B4 84 137 -28 8 1255 579 127 30 18 chr17 87938112 87938281 -7334370 + (CAGA)n Simple_repeat Simple_repeat 2 172 0 8 1255 5609 147 38 18 chr17 87938313 87939295 -7333356 + RLTR25B LTR ERVK 28 1028 0 8 1255 262 333 0 100 chr17 87939324 87939454 -7333197 + PB1D10 SINE Alu 1 117 0 8 1255 712 276 92 11 chr17 87939571 87939842 -7332809 - L1MB8 LINE L1 -152 6026 5734 8 1255 222 118 0 0 chr17 87940014 87940048 -7332603 + (TCC)n Simple_repeat Simple_repeat 2 35 0 8 1255 201 74 0 0 chr17 87940045 87940072 -7332579 + (T)n Simple_repeat Simple_repeat 1 27 0 8 1255 862 158 21 21 chr17 87940074 87940216 -7332435 - B1_Mus2 SINE Alu -2 145 4 8 1255 698 330 5 0 chr17 87940219 87940410 -7332241 - B3A SINE B2 -1 197 6 8 1255 1560 67 0 5 chr17 87941180 87941375 -7331276 + B2_Mm2 SINE B2 1 194 -1 8 1255 667 199 88 7 chr17 87941387 87941524 -7331127 + B1_Mur2 SINE Alu 2 149 0 8 1255 746 282 33 5 chr17 87941546 87941760 -7330891 + ID_B1 SINE B4 2 221 -3 8 1255 252 243 145 26 chr17 87941806 87941882 -7330769 + PB1 SINE Alu 28 112 -15 8 1255 604 257 37 0 chr17 87941918 87941945 -7330706 + B1_Mur1 SINE Alu 2 28 -121 8 1255 203 0 37 0 chr17 87941945 87941972 -7330679 + (CCCCCA)n Simple_repeat Simple_repeat 2 29 0 8 1255 604 257 37 0 chr17 87941972 87942080 -7330571 + B1_Mur1 SINE Alu 29 141 -8 8 1255 646 368 14 14 chr17 87942113 87942405 -7330246 - B4A SINE B4 0 292 1 8 1255 260 177 161 0 chr17 87942448 87942510 -7330141 - ID4_ SINE ID -11 72 1 8 1255 425 346 46 0 chr17 87942519 87942672 -7329979 + MER74B LTR ERVL 20 179 -379 8 1255 5669 74 35 9 chr17 87942826 87943630 -7329021 + RLTR22_Mus LTR ERVK 1 825 -983 8 1255 1559 146 20 8 chr17 87943830 87944085 -7328566 + RLTR22_Mur LTR ERVK 1591 1848 0 8 1255 500 285 196 51 chr17 87944613 87944949 -7327702 + MER74B LTR ERVL 174 622 0 8 1255 457 272 79 114 chr17 87945025 87945366 -7327285 + MER34A LTR ERV1 11 339 -232 8 1255 900 175 0 0 chr17 87945382 87945519 -7327132 + B1_Mus1 SINE Alu 2 138 -10 8 1255 285 128 0 0 chr17 87945519 87945566 -7327085 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1255 397 269 72 72 chr17 87945583 87945763 -7326888 - B3A SINE B2 -18 180 1 8 1255 398 304 108 0 chr17 87945807 87945955 -7326696 - RSINE1 SINE B4 0 165 2 8 1255 496 276 66 99 chr17 87945963 87946176 -7326475 + MER34A LTR ERV1 366 571 0 8 1255 1207 158 17 39 chr17 87946655 87946885 -7325766 + MTC LTR MaLR 197 421 0 8 1255 470 219 69 50 chr17 87947139 87947240 -7325411 - PB1D7 SINE Alu -6 114 12 8 1255 776 255 27 31 chr17 87947797 87948003 -7324648 + B3A SINE B2 14 215 -1 8 1255 294 324 9 61 chr17 87948006 87948121 -7324530 - LTR48B LTR ERV1 -288 356 248 8 1255 620 282 35 74 chr17 87948331 87948411 -7324240 + ID SINE ID 2 77 -147 8 1255 309 51 0 0 chr17 87948411 87948450 -7324201 + (TGGA)n Simple_repeat Simple_repeat 4 42 0 8 1255 1163 63 17 6 chr17 87948450 87948624 -7324027 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 8 1255 620 282 35 74 chr17 87948624 87948772 -7323879 + ID_B1 SINE B4 78 221 -3 8 1255 243 0 0 0 chr17 87948782 87948809 -7323842 + (A)n Simple_repeat Simple_repeat 1 27 0 8 156 224 250 56 56 chr17 87949266 87949338 -7323313 - ID4_ SINE ID -11 72 1 8 1256 256 284 117 10 chr17 87949445 87949548 -7323103 + PB1D10 SINE Alu 3 116 -1 8 1256 323 264 115 48 chr17 87949560 87949805 -7322846 + HAL1-3A_ME LINE L1 2284 2441 -417 8 1256 418 103 29 49 chr17 87949805 87949907 -7322744 + G-rich Low_complexity Low_complexity 1 100 0 8 1256 232 275 138 0 chr17 87950186 87950266 -7322385 - MER34A LTR ERV1 -45 526 436 8 1256 272 381 12 24 chr17 87950279 87950443 -7322208 + RSINE1 SINE B4 4 165 0 8 1256 1155 120 0 4 chr17 87950445 87950704 -7321947 + (CA)n Simple_repeat Simple_repeat 1 258 0 8 1256 264 271 34 0 chr17 87950758 87950817 -7321834 + PB1D10 SINE Alu 16 76 -41 8 1256 422 322 53 0 chr17 87950817 87950969 -7321682 + RSINE1 SINE B4 4 163 -2 8 1256 703 253 37 5 chr17 87951042 87951233 -7321418 + B3A SINE B2 1 197 -1 8 1256 764 141 71 43 chr17 87951261 87951402 -7321249 + B1_Mur4 SINE Alu 6 150 0 8 1256 565 248 29 21 chr17 87951428 87951568 -7321083 - B1_Mur2 SINE Alu -8 141 1 8 1256 233 244 0 0 chr17 87951593 87951638 -7321013 + PB1D10 SINE Alu 64 108 -9 8 1256 657 224 139 26 chr17 87951643 87951849 -7320802 + B3 SINE B2 1 205 -11 8 1256 218 281 86 19 chr17 87952452 87952557 -7320094 - L2 LINE L2 -1018 2401 2290 8 1256 1251 21 0 14 chr17 87952867 87953014 -7319637 + B1_Mus1 SINE Alu 3 147 -1 8 1256 482 231 87 0 chr17 87953109 87953213 -7319438 - B1F2 SINE Alu -25 124 12 8 1256 237 313 75 63 chr17 87953237 87953272 -7319379 + CYRA11_Mm Unknown Y-chromosome 147 269 -348 8 1256 766 167 8 0 chr17 87953272 87953398 -7319253 - URR1B DNA MER1_type -13 212 86 8 1256 237 313 75 63 chr17 87953398 87953411 -7319240 + CYRA11_Mm Unknown Y-chromosome 270 322 -295 8 1256 693 226 12 37 chr17 87954665 87954826 -7317825 + ID_B1 SINE B4 20 176 -48 8 1256 573 114 61 0 chr17 87954837 87954951 -7317700 + G-rich Low_complexity Low_complexity 1 121 0 8 1256 970 139 18 24 chr17 87955175 87955344 -7317307 - URR1A DNA MER1_type 0 226 59 8 1256 1118 52 0 0 chr17 87955751 87955885 -7316766 + B1_Mus2 SINE Alu 2 135 -12 8 1256 822 73 0 0 chr17 87955885 87955995 -7316656 + (GAAA)n Simple_repeat Simple_repeat 3 112 0 8 1256 416 304 67 62 chr17 87955997 87956159 -7316492 + B3A SINE B2 2 166 -32 8 1256 1837 125 55 52 chr17 87956159 87956487 -7316164 + ORR1A4 LTR MaLR 1 329 0 8 1256 416 304 67 62 chr17 87956487 87956503 -7316148 + B3A SINE B2 167 181 -17 8 1256 726 247 97 31 chr17 87956642 87956901 -7315750 - B4A SINE B4 -12 280 5 8 1256 492 300 77 0 chr17 87957008 87957138 -7315513 - ID_B1 SINE B4 -1 223 84 8 1256 3198 32 42 3 chr17 87957170 87957551 -7315100 - MTA_Mm LTR MaLR 0 396 1 8 1256 977 157 0 0 chr17 87957579 87957726 -7314925 - B1_Mus1 SINE Alu -1 147 1 8 1256 314 235 12 0 chr17 87957727 87957808 -7314843 - MER33 DNA MER1_type -165 159 78 8 1256 769 206 0 22 chr17 87958067 87958206 -7314445 + B1_Mur1 SINE Alu 2 137 -12 8 1256 330 87 0 0 chr17 87958382 87958428 -7314223 + (CA)n Simple_repeat Simple_repeat 1 46 0 8 1256 23 0 0 0 chr17 87958443 87958466 -7314185 + AT_rich Low_complexity Low_complexity 1 23 0 8 1256 375 292 132 0 chr17 87959193 87959299 -7313352 + ID_B1 SINE B4 82 201 -23 8 1256 1198 49 0 0 chr17 87959353 87959495 -7313156 + B1_Mus2 SINE Alu 1 142 -5 8 1256 267 317 57 24 chr17 87959816 87959939 -7312712 + B4 SINE B4 1 127 -165 8 1256 325 278 65 43 chr17 87960114 87960253 -7312398 - B1_Mus2 SINE Alu -5 142 1 8 1256 591 253 60 54 chr17 87960277 87960444 -7312207 - B3 SINE B2 0 216 49 8 1256 2213 107 0 7 chr17 87961384 87961694 -7310957 + RLTR10E LTR ERVK 1 308 -3 8 1256 279 0 0 0 chr17 87961793 87961824 -7310827 + (TC)n Simple_repeat Simple_repeat 1 31 0 8 1256 796 122 7 78 chr17 87961836 87961978 -7310673 - B1_Mur4 SINE Alu -13 137 6 8 1256 198 0 0 0 chr17 87961982 87962004 -7310647 + (CCA)n Simple_repeat Simple_repeat 3 24 0 8 1256 330 209 88 55 chr17 87962276 87962367 -7310284 - L2a LINE L2 -2 3424 3331 8 1256 247 294 9 38 chr17 87962949 87963055 -7309596 + PB1D10 SINE Alu 1 103 -14 8 1256 274 169 133 17 chr17 87963215 87963275 -7309376 + PB1D10 SINE Alu 44 110 -7 8 1256 309 322 32 40 chr17 87963446 87963572 -7309079 - MIR SINE MIR -68 140 16 9 1256 761 180 14 41 chr17 87963810 87963955 -7308696 - B1_Mus2 SINE Alu -1 146 6 9 1256 328 40 40 0 chr17 87963980 87964030 -7308621 + (TG)n Simple_repeat Simple_repeat 2 53 0 9 1256 649 235 0 0 chr17 87964030 87964149 -7308502 - B3 SINE B2 -71 145 27 9 1256 620 258 115 10 chr17 87964187 87964379 -7308272 - B3 SINE B2 -4 212 1 9 1256 183 257 0 0 chr17 87964408 87964482 -7308169 + (TG)n Simple_repeat Simple_repeat 1 74 0 9 1256 445 181 79 166 chr17 87964482 87964505 -7308146 - RSINE1 SINE B4 -1 164 142 9 1256 1835 193 105 5 chr17 87964505 87964886 -7307765 + MTD LTR MaLR 1 419 0 9 1256 445 181 79 166 chr17 87964886 87965001 -7307650 - RSINE1 SINE B4 -24 141 38 9 1256 300 284 12 12 chr17 87965276 87965358 -7307293 - ID4 SINE ID 0 83 2 9 1256 441 54 0 0 chr17 87965564 87965620 -7307031 + (TG)n Simple_repeat Simple_repeat 2 57 0 9 1256 845 292 18 5 chr17 87967922 87968139 -7304512 + B4A SINE B4 1 220 -72 9 1256 306 294 151 0 chr17 87968144 87968270 -7304381 + RSINE1 SINE B4 4 148 -17 9 1256 231 271 0 0 chr17 87968318 87968366 -7304285 + B3 SINE B2 50 97 -119 9 1256 798 112 39 31 chr17 87968474 87968603 -7304048 + B1_Mus2 SINE Alu 1 130 -17 9 1256 252 0 0 0 chr17 87968607 87968635 -7304016 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 9 1256 203 349 11 85 chr17 87970822 87970916 -7301735 + MIRb SINE MIR 35 121 -147 9 1256 198 0 0 0 chr17 87971264 87971286 -7301365 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 9 1256 234 0 0 0 chr17 87971337 87971363 -7301288 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 9 1256 406 268 10 40 chr17 87971368 87971469 -7301182 - PB1D10 SINE Alu -7 110 13 9 1256 811 141 14 40 chr17 87971753 87971901 -7300750 + B1_Mus2 SINE Alu 5 148 -2 9 1256 847 40 194 0 chr17 87971905 87972022 -7300629 + B1_Mus1 SINE Alu 1 141 -7 9 1256 243 0 0 0 chr17 87972022 87972049 -7300602 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 1256 428 275 57 57 chr17 87972335 87972493 -7300158 + RSINE1 SINE B4 8 165 0 9 1256 215 208 42 0 chr17 87972616 87972664 -7299987 + CT-rich Low_complexity Low_complexity 2 51 0 9 1256 1766 171 99 29 chr17 87973171 87973515 -7299136 + ORR1C1 LTR MaLR 3 370 -8 9 1256 7127 173 54 30 chr17 87973519 87974993 -7297658 + ORR1C1-int LTR MaLR 1 1509 0 9 1256 1240 185 36 0 chr17 87974994 87975216 -7297435 + ORR1C1 LTR MaLR 1 230 -148 9 1256 1067 31 8 0 chr17 87975515 87975645 -7297006 - B1_Mm SINE Alu 0 147 17 9 1256 427 43 0 6 chr17 87975680 87975746 -7296905 - B1_Mur4 SINE Alu 0 150 57 9 1256 631 308 51 35 chr17 87975746 87976002 -7296649 + RodERV21-int LTR ERV1 3525 3784 -1207 9 1256 370 390 0 11 chr17 87976071 87976255 -7296396 + RodERV21-int LTR ERV1 3890 4071 -920 9 1256 921 229 89 67 chr17 87976270 87976630 -7296021 - RLTR9A LTR ERVK 0 368 1 9 1256 902 235 10 14 chr17 87977128 87977335 -7295316 - ETnERV2-int LTR ERVK -1202 6204 5999 9 1256 432 66 37 62 chr17 87977335 87977416 -7295235 - RMER16-int LTR ERVK -1736 3670 3592 9 1256 1121 76 7 7 chr17 87977449 87977595 -7295056 - B1_Mus1 SINE Alu 0 148 3 9 1256 1398 90 21 0 chr17 87977612 87977801 -7294850 - B2_Mm2 SINE B2 -2 193 1 9 1256 11864 181 92 76 chr17 87977819 87978336 -7294315 - RMER16-int LTR ERVK -1805 3601 3075 9 1256 360 43 0 0 chr17 87978336 87978382 -7294269 + (TA)n Simple_repeat Simple_repeat 1 46 0 9 1256 11864 181 92 76 chr17 87978382 87979150 -7293501 - RMER16-int LTR ERVK -2332 3074 2322 9 1256 3144 37 0 0 chr17 87979150 87979504 -7293147 - IAPEY2_LTR LTR ERVK -3 354 1 9 1256 11864 181 92 76 chr17 87979504 87980604 -7292047 - RMER16-int LTR ERVK -3085 2321 1158 9 1256 1198 41 0 14 chr17 87980604 87980752 -7291899 - B1_Mus2 SINE Alu 0 147 2 9 1256 11864 181 92 76 chr17 87980752 87980978 -7291673 - RMER16-int LTR ERVK -4249 1157 1000 9 1256 1134 88 0 0 chr17 87980978 87981125 -7291526 + B1_Mm SINE Alu 1 147 0 9 1256 11864 181 92 76 chr17 87981125 87981769 -7290882 - RMER16-int LTR ERVK -4407 999 293 9 1256 438 239 64 21 chr17 87981986 87982127 -7290524 + RLTR41 LTR ERV1 300 446 0 9 1256 267 290 51 70 chr17 87982284 87982440 -7290211 - RMER16-int LTR ERVK -3102 212 60 9 1256 419 234 26 51 chr17 87982509 87982626 -7290025 - RLTR9A LTR ERVK 0 368 255 9 1256 276 53 0 0 chr17 87982634 87982672 -7289979 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 9 1256 1147 83 13 0 chr17 87982673 87982829 -7289822 - B2_Mm2 SINE B2 -37 158 1 9 1256 1124 88 0 0 chr17 87982907 87983054 -7289597 - B1_Mus1 SINE Alu 0 148 2 9 1256 281 330 93 0 chr17 87983063 87983160 -7289491 - RLTR9A LTR ERVK -173 195 90 9 1256 4271 115 165 13 chr17 87983160 87983524 -7289127 - RMER17A2 LTR ERVK 0 906 447 9 1256 485 32 16 0 chr17 87983524 87983587 -7289064 + (GA)n Simple_repeat Simple_repeat 1 64 0 9 1256 4271 115 165 13 chr17 87983587 87984008 -7288643 - RMER17A2 LTR ERVK -460 446 2 9 1256 845 241 115 68 chr17 87984235 87984617 -7288034 + RodERV21-int LTR ERV1 457 856 -4135 9 1256 1174 139 156 42 chr17 87985313 87985576 -7287075 - Lx5 LINE L1 0 7050 6758 9 1256 322 182 0 0 chr17 87986286 87986341 -7286310 - Lx5 LINE L1 -287 6763 6709 9 1256 258 156 14 86 chr17 87986440 87986510 -7286141 + RLTR19-int LTR ERVK 903 967 -5170 9 1256 327 49 0 0 chr17 87986594 87986635 -7286016 + (TG)n Simple_repeat Simple_repeat 2 42 0 9 1256 342 0 0 0 chr17 87986724 87986762 -7285889 + (TA)n Simple_repeat Simple_repeat 2 39 0 9 1256 213 283 0 0 chr17 87986829 87986875 -7285776 + (CA)n Simple_repeat Simple_repeat 1 46 0 9 1256 427 236 174 35 chr17 87986885 87987001 -7285650 + RLTR19-int LTR ERVK 1639 1784 -3738 9 1256 2538 86 0 0 chr17 87987096 87987420 -7285231 - ORR1A3 LTR MaLR 0 326 3 9 1256 991 271 122 41 chr17 87987642 87988409 -7284242 + RLTR19-int LTR ERVK 1870 2843 -3294 9 1256 2351 216 53 32 chr17 87988603 87989167 -7283484 - RLTR17 LTR ERVK -12 680 105 9 1256 1327 80 0 50 chr17 87989394 87989452 -7283199 + B2_Mm2 SINE B2 4 61 -134 9 1256 4391 41 2 8 chr17 87989452 87989967 -7282684 - LTRIS3 LTR ERV1 0 512 1 9 1256 1327 80 0 50 chr17 87989967 87990106 -7282545 + B2_Mm2 SINE B2 62 191 -4 9 1256 897 235 63 108 chr17 87990155 87990809 -7281842 + MurERV4_19-int LTR ERVK 3529 3750 -2387 9 1256 2224 142 175 22 chr17 87991046 87991508 -7281143 + RMER16 LTR ERVK 1 533 0 9 1256 1369 70 5 26 chr17 87991746 87991936 -7280715 - B2_Mm1a SINE B2 -6 187 2 9 1256 228 100 0 0 chr17 87991953 87991993 -7280658 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 9 1256 1023 71 0 0 chr17 87992035 87992175 -7280476 - B1_Mus1 SINE Alu 0 148 9 9 1256 229 78 38 38 chr17 87992178 87992231 -7280420 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 9 1256 290 200 80 0 chr17 87992236 87992311 -7280340 + RMER21B LTR ERV1 489 569 -273 9 1256 679 187 0 75 chr17 87992365 87992498 -7280153 - B1_Mur1 SINE Alu -22 127 5 9 1256 293 222 44 100 chr17 87992567 87992657 -7279994 + RSINE1 SINE B4 45 129 -36 9 1256 192 77 0 0 chr17 87992659 87992685 -7279966 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 9 1256 484 179 0 53 chr17 87992856 87993019 -7279632 + (TG)n Simple_repeat Simple_repeat 2 155 0 9 1256 2931 12 0 0 chr17 87993019 87993341 -7279310 - RLTRETN_Mm LTR ERVK 0 322 1 9 1256 484 179 0 53 chr17 87993341 87993366 -7279285 + (TG)n Simple_repeat Simple_repeat 1 25 0 9 1256 967 178 12 17 chr17 87993411 87993583 -7279068 + RLTR11A LTR ERVK 11 181 -347 9 1256 580 132 0 0 chr17 87993582 87993665 -7278986 + RLTR11A LTR ERVK 99 181 -347 9 1256 2675 126 21 14 chr17 87993664 87994091 -7278560 + RLTR11A LTR ERVK 99 528 0 9 1256 668 248 144 64 chr17 87994151 87994401 -7278250 + RLTR20D LTR ERVK 1 270 -298 9 1256 573 247 87 68 chr17 87994390 87994551 -7278100 + RLTR20D LTR ERVK 405 568 0 9 1256 270 0 0 0 chr17 87994608 87994638 -7278013 + (CA)n Simple_repeat Simple_repeat 1 30 0 9 1256 511 267 44 59 chr17 87994690 87994961 -7277690 + RMER3D-int LTR ERVK 101 367 -2475 9 1256 311 295 17 62 chr17 87995063 87995240 -7277411 - L1MA4A LINE L1 -394 5909 5741 9 1256 9518 135 12 24 chr17 87995240 87995276 -7277375 + MurERV4_19-int LTR ERVK 3350 3384 -2396 9 1256 1313 73 17 11 chr17 87995276 87995456 -7277195 + B2_Mm2 SINE B2 1 181 -14 9 1256 9518 135 12 24 chr17 87995456 87995850 -7276801 + MurERV4_19-int LTR ERVK 3385 3763 -2017 9 1256 2670 89 162 12 chr17 87995850 87996269 -7276382 + RLTR45 LTR ERVK 1 482 0 9 1256 9518 135 12 24 chr17 87996269 87997382 -7275269 + MurERV4_19-int LTR ERVK 3764 4876 -904 9 1256 30 0 0 0 chr17 87997727 87997757 -7274894 + AT_rich Low_complexity Low_complexity 1 30 0 9 1256 2156 106 50 0 chr17 87997757 87998078 -7274573 + MurERV4_19-int LTR ERVK 4878 5214 -566 9 1256 1589 192 5 89 chr17 87998090 87998472 -7274179 + RMER19C LTR ERVK 262 611 0 9 1256 3258 26 51 0 chr17 87998576 87998967 -7273684 + IAPLTR2a LTR ERVK 1 411 0 9 1256 270 0 0 0 chr17 87999439 87999469 -7273182 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 9 1256 1519 44 0 6 chr17 87999469 87999651 -7273000 - B2_Mm2 SINE B2 -13 182 2 9 1256 764 162 153 19 chr17 87999802 87999959 -7272692 + RLTR41 LTR ERV1 269 446 0 9 1256 513 144 0 52 chr17 88000039 88000149 -7272502 - B1_Mur3 SINE Alu -1 148 18 1 1256 694 218 206 6 chr17 88000170 88000350 -7272301 - B3 SINE B2 0 216 1 2 1256 543 234 0 0 chr17 88000430 88000537 -7272114 + PB1D7 SINE Alu 1 107 -13 3 1256 512 78 18 0 chr17 88000582 88000657 -7271994 + B2_Mm2 SINE B2 23 105 -90 4 1256 1231 54 0 0 chr17 88000718 88000866 -7271785 - B1_Mus1 SINE Alu 0 148 1 5 1256 180 0 0 0 chr17 88001274 88001294 -7271357 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 1256 243 0 0 0 chr17 88001292 88001319 -7271332 + (T)n Simple_repeat Simple_repeat 1 27 0 7 1256 243 204 0 0 chr17 88002353 88002407 -7270244 + A-rich Low_complexity Low_complexity 1 54 0 8 1256 325 209 45 0 chr17 88003212 88003224 -7269427 + B1_Mur1 SINE Alu 79 144 -1 9 1256 347 137 0 0 chr17 88003224 88003275 -7269376 + ID_B1 SINE B4 169 219 -5 1 1256 342 200 38 0 chr17 88003279 88003359 -7269292 + L1MA5A LINE L1 6141 6223 -74 1 1256 235 45 22 43 chr17 88003369 88003415 -7269236 + (TTTG)n Simple_repeat Simple_repeat 4 48 0 1 1256 362 291 35 26 chr17 88003416 88003529 -7269122 - PB1D10 SINE Alu -3 114 1 1 1256 470 239 211 18 chr17 88003642 88003808 -7268843 + B3A SINE B2 1 198 0 1 1256 215 304 157 14 chr17 88003835 88003905 -7268746 + ID4_ SINE ID 4 83 0 1 1256 242 292 7 137 chr17 88003934 88003963 -7268688 - MT2B LTR ERVL -295 306 186 1 1256 469 194 0 109 chr17 88003963 88004073 -7268578 - PB1D9 SINE Alu -1 119 22 1 1256 189 0 0 0 chr17 88004085 88004106 -7268545 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1256 1043 93 143 0 chr17 88004114 88004275 -7268376 + B2_Mm1t SINE B2 2 185 -8 1 1256 415 212 121 0 chr17 88004304 88004403 -7268248 + B1_Mur4 SINE Alu 40 150 0 2 1256 309 319 93 29 chr17 88004436 88004575 -7268076 + RSINE1 SINE B4 18 165 0 2 1256 22 26 0 25 chr17 88004596 88004614 -7268037 + AT_rich Low_complexity Low_complexity 1 18 0 2 1256 1409 57 23 0 chr17 88004614 88004791 -7267860 + B2_Mm2 SINE B2 1 181 -14 2 1256 22 26 0 25 chr17 88004791 88004812 -7267839 + AT_rich Low_complexity Low_complexity 1 21 0 2 1256 2140 52 4 0 chr17 88004819 88005086 -7267565 + L1Md_F2 LINE L1 6315 6582 0 2 1256 1083 69 0 46 chr17 88005108 88005251 -7267400 + B1_Mm SINE Alu 1 137 -10 2 1256 243 0 0 0 chr17 88005251 88005278 -7267373 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1256 663 128 106 35 chr17 88005298 88005411 -7267240 + B1_Mur4 SINE Alu 22 142 -8 2 1256 801 27 27 0 chr17 88005426 88005538 -7267113 + (TAGA)n Simple_repeat Simple_repeat 3 117 0 2 1256 525 229 0 37 chr17 88005540 88005649 -7267002 + B1_Mur1 SINE Alu 43 147 -2 3 1256 351 0 0 0 chr17 88005664 88005703 -7266948 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1256 806 179 19 29 chr17 88005738 88006005 -7266646 + ORR1A4 LTR MaLR 2 348 -11 3 1256 210 269 139 13 chr17 88006078 88006157 -7266494 + PB1 SINE Alu 29 117 -10 3 1256 615 228 15 52 chr17 88006184 88006318 -7266333 + RSINE1 SINE B4 2 130 -35 3 1256 34 42 0 0 chr17 88006329 88006377 -7266274 + AT_rich Low_complexity Low_complexity 1 48 0 3 1256 1318 195 8 11 chr17 88006379 88006643 -7266008 + BGLII_B LTR ERVK 16 278 -163 3 1256 1035 181 44 40 chr17 88006630 88006878 -7265773 + BGLII_B LTR ERVK 193 441 0 3 1256 719 231 220 0 chr17 88007100 88007273 -7265378 + B3 SINE B2 1 211 -5 3 1256 1260 34 0 0 chr17 88007463 88007610 -7265041 - B1_Mus1 SINE Alu 0 148 2 3 1256 630 233 222 5 chr17 88007689 88007905 -7264746 + Lx8 LINE L1 6572 6834 -639 3 1256 419 294 10 120 chr17 88007905 88007935 -7264716 - B2_Mm2 SINE B2 -7 188 158 4 1256 333 0 0 0 chr17 88007935 88007972 -7264679 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1256 649 278 18 2 chr17 88007972 88008150 -7264501 - B3A SINE B2 -33 183 3 4 1256 467 155 13 118 chr17 88008193 88008310 -7264341 + B1_Mur3 SINE Alu 3 117 0 4 1256 360 289 137 7 chr17 88008502 88008655 -7263996 + Lx8 LINE L1 7155 7327 -146 3 1256 1231 187 9 0 chr17 88009683 88009897 -7262754 - B3 SINE B2 0 216 1 4 1256 213 343 15 15 chr17 88010514 88010582 -7262069 + RSINE1 SINE B4 98 165 0 4 1256 221 0 35 0 chr17 88010826 88010855 -7261796 + (GGGGA)n Simple_repeat Simple_repeat 5 34 0 4 1256 355 188 27 82 chr17 88010876 88010986 -7261665 + ID_B1 SINE B4 121 224 0 4 1256 391 189 27 0 chr17 88011220 88011294 -7261357 - ID4 SINE ID -3 80 5 4 1256 273 235 184 48 chr17 88011406 88011441 -7261210 - PB1D10 SINE Alu 0 117 5 4 1256 299 238 0 16 chr17 88011441 88011505 -7261146 - ID_B1 SINE B4 -76 148 86 5 1256 188 34 0 33 chr17 88011543 88011573 -7261078 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1256 1151 44 0 0 chr17 88011574 88011711 -7260940 - B1_Mus2 SINE Alu -10 137 1 5 1256 880 264 0 9 chr17 88011771 88011981 -7260670 - B3 SINE B2 -7 209 2 5 1256 359 273 86 57 chr17 88012246 88012386 -7260265 - RSINE1 SINE B4 -14 151 8 5 1256 724 221 71 31 chr17 88013592 88013619 -7259032 - B3 SINE B2 -12 204 166 5 1256 414 0 0 0 chr17 88013619 88013665 -7258986 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1256 724 221 71 31 chr17 88013665 88013833 -7258818 - B3 SINE B2 -51 165 1 5 1256 494 258 94 99 chr17 88014013 88014194 -7258457 + B3 SINE B2 2 188 -28 5 1256 550 216 0 10 chr17 88014209 88014307 -7258344 + B1_Mur2 SINE Alu 1 97 -52 5 1256 294 143 0 0 chr17 88014307 88014356 -7258295 + (TAA)n Simple_repeat Simple_repeat 1 49 0 5 1256 275 220 0 0 chr17 88014356 88014406 -7258245 + B1_Mur1 SINE Alu 97 146 -3 6 1256 364 294 108 0 chr17 88014410 88014512 -7258139 + PB1D7 SINE Alu 1 113 -7 6 1256 674 215 22 29 chr17 88014696 88014835 -7257816 - B1_Mur2 SINE Alu -3 146 9 6 1256 30 49 0 16 chr17 88014957 88015002 -7257649 + AT_rich Low_complexity Low_complexity 1 45 0 6 1256 1335 93 16 0 chr17 88015002 88015185 -7257466 + B2_Mm2 SINE B2 2 187 -8 6 1256 30 49 0 16 chr17 88015185 88015201 -7257450 + AT_rich Low_complexity Low_complexity 1 16 0 6 1256 252 0 0 0 chr17 88015319 88015347 -7257304 + (T)n Simple_repeat Simple_repeat 1 28 0 6 1256 1285 34 0 0 chr17 88015347 88015494 -7257157 - B1_Mus1 SINE Alu 0 148 2 6 1256 236 154 0 0 chr17 88015494 88015533 -7257118 - B3A SINE B2 -158 40 2 6 1256 390 379 88 12 chr17 88015625 88015876 -7256775 + MLT2F LTR ERVL 5 274 -389 6 1256 260 326 61 3 chr17 88015996 88016110 -7256541 + LTR33C LTR ERVL 194 311 -317 7 1256 325 280 27 208 chr17 88016516 88016810 -7255841 + LTR37B LTR ERV1 38 281 -187 7 1256 207 0 0 0 chr17 88016810 88016833 -7255818 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 7 1256 1425 62 6 0 chr17 88016835 88017011 -7255640 - B2_Mm1a SINE B2 -15 178 2 7 1256 325 280 27 208 chr17 88017011 88017151 -7255500 + LTR37B LTR ERV1 282 396 -72 7 1256 1754 198 180 40 chr17 88017199 88017572 -7255079 - RMER4B LTR ERVK 0 585 156 7 1256 812 145 123 24 chr17 88017572 88017742 -7254909 + B2_Mm2 SINE B2 1 187 -8 7 1256 1754 192 71 42 chr17 88017742 88017880 -7254771 - RMER4B LTR ERVK -430 155 17 7 1256 264 289 0 62 chr17 88017874 88017955 -7254696 + LTR37B LTR ERV1 393 468 0 7 1256 261 0 0 0 chr17 88018177 88018206 -7254445 + (TGG)n Simple_repeat Simple_repeat 1 29 0 7 1256 636 59 0 0 chr17 88018206 88018291 -7254360 + (TG)n Simple_repeat Simple_repeat 1 85 0 7 1256 359 331 34 68 chr17 88018295 88018441 -7254210 - RSINE1 SINE B4 -20 145 5 7 1256 419 296 98 29 chr17 88018441 88018615 -7254036 + Charlie12 DNA MER1_type 2040 2225 -648 7 1256 242 45 0 62 chr17 88018614 88018662 -7253989 - B3 SINE B2 0 216 172 8 1256 276 207 35 0 chr17 88018765 88018823 -7253828 + MTD LTR MaLR 360 419 0 8 1256 473 244 9 9 chr17 88018965 88019081 -7253570 + Charlie12 DNA MER1_type 2586 2701 -172 7 1256 465 66 0 0 chr17 88019110 88019171 -7253480 + (TG)n Simple_repeat Simple_repeat 1 61 0 8 1256 585 277 0 0 chr17 88019178 88019297 -7253354 - RSINE1 SINE B4 -46 119 1 8 1256 473 247 40 40 chr17 88019297 88019461 -7253190 + Charlie12 DNA MER1_type 2693 2856 -17 7 1256 369 0 0 0 chr17 88019775 88019816 -7252835 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 1256 810 215 12 18 chr17 88019816 88019982 -7252669 - B3 SINE B2 -51 165 1 8 1256 309 265 35 105 chr17 88019993 88020107 -7252544 - PB1D7 SINE Alu -3 117 12 8 1256 231 146 0 0 chr17 88020175 88020216 -7252435 + (TATG)n Simple_repeat Simple_repeat 4 44 0 8 1256 414 285 29 97 chr17 88020219 88020394 -7252257 - RSINE1 SINE B4 0 165 3 8 1256 554 254 68 15 chr17 88020483 88020494 -7252157 - ID_B1 SINE B4 -2 222 212 8 1256 270 0 0 0 chr17 88020494 88020524 -7252127 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 9 1256 554 254 68 15 chr17 88020524 88020644 -7252007 - ID_B1 SINE B4 -13 211 84 8 1256 507 231 181 32 chr17 88020682 88020870 -7251781 - B3 SINE B2 0 216 1 9 1256 559 209 62 35 chr17 88020871 88021015 -7251636 - B1F SINE Alu -1 148 1 9 1256 245 347 74 0 chr17 88020910 88021031 -7251620 - B4 SINE B4 -93 199 70 9 1256 1020 89 0 0 chr17 88021169 88021327 -7251324 + (TCTA)n Simple_repeat Simple_repeat 4 161 0 9 1256 1266 27 0 0 chr17 88021343 88021489 -7251162 - B1_Mus2 SINE Alu 0 147 2 9 1256 615 181 75 0 chr17 88022326 88022452 -7250199 + B1_Mur1 SINE Alu 1 137 -12 9 1256 459 0 0 0 chr17 88022461 88022512 -7250139 + (CA)n Simple_repeat Simple_repeat 2 52 0 9 1256 567 264 7 14 chr17 88022516 88022662 -7249989 - B1F SINE Alu 0 149 5 9 1256 411 56 0 0 chr17 88022886 88022940 -7249711 + (TG)n Simple_repeat Simple_repeat 1 54 0 9 1256 620 265 22 7 chr17 88022941 88023078 -7249573 - RSINE1 SINE B4 -25 140 2 1 1256 360 240 38 19 chr17 88023096 88023202 -7249449 - L1MA6 LINE L1 -51 6249 6142 1 1256 254 218 18 0 chr17 88023260 88023315 -7249336 + B3 SINE B2 161 216 0 1 1256 336 24 0 0 chr17 88023511 88023552 -7249099 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1256 351 279 119 37 chr17 88023569 88023703 -7248948 - RSINE1 SINE B4 -4 161 17 1 1256 201 39 0 0 chr17 88023880 88023906 -7248745 + (TTTTTG)n Simple_repeat Simple_repeat 5 30 0 1 1256 722 123 0 0 chr17 88023906 88024012 -7248639 - B2_Mm2 SINE B2 -88 107 2 1 1256 1018 103 14 0 chr17 88024072 88024217 -7248434 - B1_Mus1 SINE Alu 0 148 2 1 1256 1041 119 41 18 chr17 88024399 88024421 -7248230 - B2_Mm2 SINE B2 -20 175 155 1 1256 273 57 0 0 chr17 88024421 88024456 -7248195 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 1 1256 1041 119 41 18 chr17 88024456 88024604 -7248047 - B2_Mm2 SINE B2 -41 154 1 1 1256 27 0 0 0 chr17 88024604 88024631 -7248020 + AT_rich Low_complexity Low_complexity 1 27 0 1 1256 198 0 0 0 chr17 88024759 88024781 -7247870 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 1256 494 213 23 69 chr17 88024815 88024946 -7247705 + PB1 SINE Alu 1 125 -2 1 1256 194 0 0 37 chr17 88025755 88025782 -7246869 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 1256 189 0 0 0 chr17 88025784 88025805 -7246846 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 1 1256 1154 59 0 0 chr17 88025805 88025940 -7246711 - B1_Mm SINE Alu -12 135 1 1 1256 214 251 86 132 chr17 88025944 88025977 -7246674 - B2_Mm2 SINE B2 -6 189 153 1 1256 207 88 0 0 chr17 88025977 88026011 -7246640 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1256 418 251 86 132 chr17 88026011 88026174 -7246477 - B3A SINE B2 -39 159 2 1 1256 441 0 0 0 chr17 88026216 88026265 -7246386 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1256 744 197 8 0 chr17 88026265 88026387 -7246264 - RSINE1 SINE B4 -41 124 2 1 1256 875 204 93 10 chr17 88026414 88026607 -7246044 + B3 SINE B2 1 209 -7 1 1256 351 0 0 0 chr17 88027454 88027493 -7245158 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1 1256 833 231 85 5 chr17 88027866 88028066 -7244585 - B3 SINE B2 0 216 1 1 1256 486 237 51 26 chr17 88028138 88028255 -7244396 - PB1D9 SINE Alu 0 120 1 1 1256 342 152 0 0 chr17 88028396 88028455 -7244196 + CT-rich Low_complexity Low_complexity 2 60 0 1 1256 487 235 43 0 chr17 88028467 88028582 -7244069 - PB1D7 SINE Alu 0 120 1 1 1256 425 257 66 0 chr17 88028701 88028837 -7243814 + B1F SINE Alu 5 149 0 1 1256 1153 81 0 0 chr17 88029203 88029351 -7243300 - B1_Mus1 SINE Alu 0 148 1 1 1256 371 252 56 9 chr17 88029465 88029573 -7243078 + B3 SINE B2 104 216 0 1 1256 1201 62 0 0 chr17 88029593 88029739 -7242912 + B1_Mm SINE Alu 2 147 0 1 1256 204 40 0 0 chr17 88029739 88029764 -7242887 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1256 542 15 15 0 chr17 88029901 88029968 -7242683 + (TCTA)n Simple_repeat Simple_repeat 1 68 0 1 1256 715 178 20 46 chr17 88029974 88030127 -7242524 - B1F2 SINE Alu 0 149 1 1 1256 261 0 0 0 chr17 88030132 88030161 -7242490 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1256 279 0 0 0 chr17 88030161 88030191 -7242460 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 1256 632 300 22 52 chr17 88030234 88030429 -7242222 - B4 SINE B4 -67 225 34 1 1256 1420 54 5 31 chr17 88030429 88030621 -7242030 - B2_Mm2 SINE B2 -8 187 1 1 1256 632 300 22 52 chr17 88030621 88030657 -7241994 - B4 SINE B4 -259 33 1 1 1256 189 0 0 0 chr17 88030667 88030688 -7241963 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1256 1206 35 14 0 chr17 88030688 88030833 -7241818 - B1_Mm SINE Alu 0 147 1 1 1256 216 158 0 0 chr17 88031039 88031077 -7241574 + CT-rich Low_complexity Low_complexity 3 40 0 1 1256 231 336 26 35 chr17 88031198 88031312 -7241339 + L1MC4a LINE L1 7520 7632 -250 1 1256 249 159 0 22 chr17 88031313 88031358 -7241293 + ID SINE ID 24 67 -157 1 1256 965 153 0 0 chr17 88031419 88031569 -7241082 - B1_Mur4 SINE Alu 0 150 1 1 1256 372 271 52 0 chr17 88031569 88031665 -7240986 + PB1D7 SINE Alu 12 112 -8 1 1256 369 236 56 84 chr17 88031703 88031737 -7240914 + B1F1 SINE Alu 12 108 -41 1 1256 473 262 9 0 chr17 88031737 88031844 -7240807 + ID_B1 SINE B4 113 220 -4 1 1256 369 236 56 84 chr17 88031844 88031856 -7240795 + B1F1 SINE Alu 109 149 0 1 1256 1456 176 11 19 chr17 88032443 88032709 -7239942 + RMER17C-int LTR ERVK 2975 3238 0 1 1256 768 180 54 25 chr17 88032709 88032882 -7239769 + RMER17C LTR ERVK 1 179 -231 1 1256 979 104 17 11 chr17 88032882 88033057 -7239594 + (TCTCC)n Simple_repeat Simple_repeat 2 177 0 1 1256 768 160 19 184 chr17 88033057 88033212 -7239439 + RMER17C LTR ERVK 180 481 -328 1 1256 919 152 74 65 chr17 88033184 88033376 -7239275 + RMER17C LTR ERVK 84 279 -131 1 1256 357 43 0 0 chr17 88033376 88033423 -7239228 + (CTATA)n Simple_repeat Simple_repeat 1 47 0 1 1256 919 152 74 65 chr17 88033423 88033554 -7239097 + RMER17C LTR ERVK 280 410 0 1 1256 1215 54 0 0 chr17 88033640 88033787 -7238864 + B1_Mus2 SINE Alu 1 147 0 1 1256 1058 192 44 0 chr17 88034116 88034319 -7238332 + B3 SINE B2 5 216 0 1 1256 810 244 14 10 chr17 88034455 88034662 -7237989 - ID_B1 SINE B4 -12 212 5 1 1256 372 235 0 12 chr17 88034880 88034962 -7237689 - RSINE1 SINE B4 -38 127 47 1 1256 180 0 0 0 chr17 88035360 88035380 -7237271 + (CGG)n Simple_repeat Simple_repeat 3 22 0 1 1256 180 0 0 0 chr17 88035424 88035444 -7237207 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1256 507 202 9 18 chr17 88035450 88035561 -7237090 - PB1D9 SINE Alu -6 114 5 1 1256 569 252 33 26 chr17 88035558 88035709 -7236942 + B3 SINE B2 54 205 -11 1 1256 225 94 0 0 chr17 88035954 88035986 -7236665 + (CGGG)n Simple_repeat Simple_repeat 4 35 0 1 1256 215 266 26 9 chr17 88036039 88036153 -7236498 + (CCGCG)n Simple_repeat Simple_repeat 1 116 0 1 1256 510 262 100 12 chr17 88037223 88037393 -7235258 + ID_B1 SINE B4 38 222 -2 1 1256 227 230 12 119 chr17 88037568 88037652 -7234999 + B1F SINE Alu 1 75 -74 1 1256 234 0 0 0 chr17 88037725 88037751 -7234900 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1256 463 232 163 44 chr17 88037768 88037903 -7234748 + RSINE1 SINE B4 15 165 0 1 1256 372 184 103 60 chr17 88037993 88038109 -7234542 + B1_Mur1 SINE Alu 2 122 -27 1 1256 327 250 22 0 chr17 88038141 88038220 -7234431 + PB1D10 SINE Alu 56 149 0 1 1256 305 306 79 36 chr17 88038327 88038466 -7234185 + RSINE1 SINE B4 2 146 -19 1 1256 585 0 0 0 chr17 88038496 88038561 -7234090 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 1256 571 256 0 8 chr17 88038902 88039036 -7233615 - B1_Mur4 SINE Alu -17 133 1 1 1256 195 42 0 0 chr17 88039036 88039060 -7233591 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1256 234 0 0 0 chr17 88039197 88039223 -7233428 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1256 219 322 133 0 chr17 88039928 88039962 -7232689 + B1F1 SINE Alu 30 131 -18 1 1256 273 179 143 0 chr17 88039962 88040018 -7232633 + ID_B1 SINE B4 143 206 -18 1 1256 403 278 227 17 chr17 88040869 88041110 -7231541 - L1MC4 LINE L1 -561 7481 7190 1 1256 24 24 0 24 chr17 88041113 88041134 -7231517 + AT_rich Low_complexity Low_complexity 1 21 0 1 1256 477 50 0 0 chr17 88041134 88041194 -7231457 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 1256 24 24 0 24 chr17 88041194 88041214 -7231437 + AT_rich Low_complexity Low_complexity 1 20 0 1 1256 235 274 0 61 chr17 88041229 88041295 -7231356 + B1_Mur1 SINE Alu 88 149 0 1 1256 199 72 23 23 chr17 88041527 88041570 -7231081 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 1256 963 114 0 0 chr17 88041665 88041796 -7230855 - B1_Mus1 SINE Alu -13 135 5 1 1256 938 219 64 160 chr17 88042042 88042130 -7230521 - MTE2a LTR MaLR 0 379 305 1 1256 609 238 134 5 chr17 88042130 88042316 -7230335 - B3 SINE B2 -6 210 1 1 1256 938 219 64 160 chr17 88042316 88042646 -7230005 - MTE2a LTR MaLR -75 304 1 1 1256 313 94 18 36 chr17 88043027 88043082 -7229569 - B1_Mur2 SINE Alu 0 149 96 1 1256 348 200 0 0 chr17 88043087 88043167 -7229484 + (CA)n Simple_repeat Simple_repeat 2 81 0 1 1256 558 0 0 0 chr17 88043167 88043229 -7229422 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 1 1256 447 195 0 0 chr17 88043231 88043313 -7229338 - PB1D9 SINE Alu -34 86 5 1 1256 371 141 141 0 chr17 88043313 88043384 -7229267 - PB1D10 SINE Alu -7 110 30 1 1256 472 284 35 82 chr17 88043591 88043715 -7228936 + ID_B1 SINE B4 1 207 -85 1 1256 745 92 37 0 chr17 88043715 88043824 -7228827 + B1_Mus1 SINE Alu 36 148 0 1 1256 472 284 35 82 chr17 88043824 88043843 -7228808 + ID_B1 SINE B4 208 242 -50 1 1256 280 297 152 11 chr17 88044136 88044228 -7228423 - ID_B1 SINE B4 -100 124 20 1 1256 260 310 82 12 chr17 88044389 88044559 -7228092 + RMER17D2 LTR ERVK 372 553 -256 1 1256 508 250 45 46 chr17 88044541 88044706 -7227945 - B3A SINE B2 -3 213 45 1 1256 952 162 0 0 chr17 88044733 88044881 -7227770 - B1_Mur4 SINE Alu 0 150 3 1 1256 279 250 100 0 chr17 88044907 88044987 -7227664 + PB1D10 SINE Alu 3 90 -27 1 1256 231 327 43 52 chr17 88045027 88045143 -7227508 - PB1D7 SINE Alu -5 115 1 1 1256 301 295 0 0 chr17 88046111 88046172 -7226479 + ID_B1 SINE B4 94 154 -70 1 1256 292 274 55 0 chr17 88046172 88046184 -7226467 + B1F2 SINE Alu 13 89 -60 1 1256 22 35 0 0 chr17 88046252 88046281 -7226370 + AT_rich Low_complexity Low_complexity 1 29 0 1 1256 349 371 43 60 chr17 88046344 88046579 -7226072 - B4 SINE B4 -2 290 60 1 1256 270 195 12 49 chr17 88046580 88046661 -7225990 - B4A SINE B4 0 292 215 1 1256 346 296 33 53 chr17 88046677 88046827 -7225824 - B1_Mm SINE Alu 0 147 1 1 1256 234 0 0 0 chr17 88046827 88046853 -7225798 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1256 447 19 0 0 chr17 88046875 88046927 -7225724 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 1256 212 275 200 0 chr17 88046945 88047025 -7225626 - PB1 SINE Alu -31 96 1 2 1256 294 319 10 41 chr17 88047050 88047148 -7225503 + PB1D10 SINE Alu 2 96 -21 2 1256 321 182 26 302 chr17 88047333 88047441 -7225210 + RLTR28 LTR ERVL 1 88 -436 2 1256 1157 62 14 0 chr17 88047441 88047587 -7225064 + B1_Mus1 SINE Alu 1 148 0 2 1256 321 182 26 302 chr17 88047587 88047667 -7224984 + RLTR28 LTR ERVL 89 137 -387 2 1256 1427 60 5 31 chr17 88047729 88047920 -7224731 - B2_Mm1a SINE B2 -7 186 1 2 1256 974 48 0 0 chr17 88047940 88048065 -7224586 - L1_Mus1 LINE L1 -6 6561 6437 2 1256 257 269 12 33 chr17 88048163 88048237 -7224414 + PB1D10 SINE Alu 41 120 -29 2 1256 1193 55 7 0 chr17 88048237 88048382 -7224269 - B1_Mus1 SINE Alu -2 146 1 2 1256 225 302 108 59 chr17 88048382 88048409 -7224242 + B1F SINE Alu 121 147 -2 2 1256 368 238 198 0 chr17 88048547 88048648 -7224003 + B1_Mur1 SINE Alu 2 122 -27 2 1256 241 254 18 35 chr17 88049302 88049359 -7223292 + B1_Mur2 SINE Alu 1 56 -93 2 1256 809 176 0 0 chr17 88049445 88049576 -7223075 - B1_Mus2 SINE Alu -16 131 1 2 1256 599 160 21 84 chr17 88049610 88049753 -7222898 + B1_Mur4 SINE Alu 5 138 -12 2 1256 325 333 38 38 chr17 88050327 88050458 -7222193 + ID_B1 SINE B4 94 224 0 2 1256 212 231 195 49 chr17 88050494 88050576 -7222075 + B1F1 SINE Alu 40 133 -16 2 1256 247 300 29 0 chr17 88050617 88050687 -7221964 + ID4_ SINE ID 3 74 -9 2 1256 3321 33 8 5 chr17 88050689 88051084 -7221567 - MTA_Mm LTR MaLR 0 396 1 2 1256 321 42 19 77 chr17 88051508 88051560 -7221091 + RLTR9A LTR ERVK 192 240 -128 2 1256 315 0 0 0 chr17 88051598 88051633 -7221018 + (TTA)n Simple_repeat Simple_repeat 2 36 0 2 1256 1132 98 7 0 chr17 88051635 88051788 -7220863 - B2_Mm1t SINE B2 -38 155 2 2 1256 1188 75 0 0 chr17 88051811 88051958 -7220693 - B1_Mus2 SINE Alu 0 147 1 2 1256 252 106 43 0 chr17 88051969 88052016 -7220635 + ETnERV2-int LTR ERVK 2143 2191 -5215 2 1256 6904 213 30 76 chr17 88052118 88052936 -7219715 + ETnERV2-int LTR ERVK 1415 2835 -4571 2 1256 1490 68 16 0 chr17 88052936 88053127 -7219524 + B2_Mm2 SINE B2 2 195 0 2 1256 1127 74 0 7 chr17 88053130 88053279 -7219372 + B1_Mus1 SINE Alu 1 148 0 2 1256 6904 189 35 83 chr17 88053279 88053308 -7219343 + ETnERV2-int LTR ERVK 2836 2859 -4547 2 1256 1569 47 5 0 chr17 88053308 88053498 -7219153 + B2_Mm1a SINE B2 1 191 -2 2 1256 6904 189 35 83 chr17 88053498 88054207 -7218444 + ETnERV2-int LTR ERVK 2860 3539 -3867 2 1256 1247 41 0 26 chr17 88054207 88054359 -7218292 + B1_Mus1 SINE Alu 1 148 0 2 1256 6904 189 35 83 chr17 88054359 88054714 -7217937 + ETnERV2-int LTR ERVK 3540 3878 -3528 2 1256 1380 57 0 77 chr17 88054726 88054743 -7217908 + B2_Mm2 SINE B2 3 19 -176 2 1256 3486 116 19 72 chr17 88054743 88055339 -7217312 - LTRIS2 LTR ERV1 0 564 1 2 1256 1380 57 0 77 chr17 88055339 88055530 -7217121 + B2_Mm2 SINE B2 20 195 0 2 1256 318 132 0 0 chr17 88055575 88055628 -7217023 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 1256 4513 161 41 71 chr17 88055642 88056453 -7216198 + RMER16-int LTR ERVK 2873 3652 -1754 2 1256 1092 83 0 0 chr17 88056453 88056597 -7216054 + B1_Mus1 SINE Alu 5 148 0 2 1256 4513 195 37 59 chr17 88056597 88056979 -7215672 + RMER16-int LTR ERVK 3653 3866 -1540 2 1256 261 296 23 0 chr17 88057127 88057215 -7215436 + RMER16-int LTR ERVK 6336 6425 -981 2 1256 698 282 53 46 chr17 88057249 88057486 -7215165 - LTRIS4 LTR ERV1 -116 512 285 2 1256 1715 279 25 21 chr17 88057616 88058156 -7214495 - MuRRS4-int LTR ERV1 -31 5032 4517 2 1256 1279 27 0 0 chr17 88058156 88058302 -7214349 - B1_Mus2 SINE Alu 0 147 2 2 1256 1219 308 49 82 chr17 88058302 88058917 -7213734 - MuRRS4-int LTR ERV1 -525 7253 6507 2 1256 3562 301 54 44 chr17 88059249 88059563 -7213088 - MuRRS4-int LTR ERV1 -4905 2651 2338 2 1256 2810 44 12 6 chr17 88059563 88059903 -7212748 + ORR1A0 LTR MaLR 1 342 -4 2 1256 4480 281 49 65 chr17 88059903 88061571 -7211080 - MuRRS4-int LTR ERV1 -5219 2337 536 2 1256 1212 55 0 0 chr17 88061571 88061717 -7210934 - B1_Mus2 SINE Alu 0 147 2 2 1256 4480 277 48 68 chr17 88061717 88061792 -7210859 - MuRRS4-int LTR ERV1 -4528 535 466 2 1256 1476 73 5 0 chr17 88061792 88061983 -7210668 - B2_Mm1a SINE B2 -1 192 1 2 1256 4480 247 44 61 chr17 88061983 88062499 -7210152 - MuRRS4-int LTR ERV1 -4598 465 5 2 1256 683 281 74 37 chr17 88062501 88062771 -7209880 - LTRIS4 LTR ERV1 0 507 228 2 1256 2091 195 5 51 chr17 88062961 88063364 -7209287 + ETnERV2-int LTR ERVK 5785 6170 -1236 2 1256 2592 114 88 5 chr17 88063364 88063752 -7208899 - RLTR9B2 LTR ERVK 0 420 1 2 1256 2091 195 5 51 chr17 88063752 88063796 -7208855 + ETnERV2-int LTR ERVK 6171 6211 -1195 2 1256 347 215 189 27 chr17 88063895 88064043 -7208608 + ETnERV2-int LTR ERVK 6254 6425 -981 2 1256 198 0 0 0 chr17 88064247 88064269 -7208382 + (TAA)n Simple_repeat Simple_repeat 2 23 0 2 1256 21 0 0 0 chr17 88064316 88064337 -7208314 + AT_rich Low_complexity Low_complexity 1 21 0 2 1256 2247 101 92 0 chr17 88064345 88064682 -7207969 + RLTR9A LTR ERVK 1 368 0 2 1256 252 0 0 0 chr17 88064756 88064784 -7207867 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 2 1256 294 303 49 83 chr17 88064851 88064995 -7207656 - LTR41 LTR ERVL -531 237 99 2 1256 251 188 40 135 chr17 88065385 88065419 -7207232 - ID4_ SINE ID -16 67 40 2 1256 897 66 0 0 chr17 88065419 88065540 -7207111 + (TG)n Simple_repeat Simple_repeat 2 122 0 2 1256 251 188 40 135 chr17 88065540 88065579 -7207072 - ID4_ SINE ID -44 39 1 2 1256 247 314 51 103 chr17 88065592 88065709 -7206942 + PB1D9 SINE Alu 6 116 -4 2 1256 3171 74 17 118 chr17 88065755 88066291 -7206360 + RLTR45 LTR ERVK 1 482 0 2 1256 763 130 0 0 chr17 88066584 88066699 -7205952 - B1_Mur1 SINE Alu -3 146 32 2 1256 384 310 118 42 chr17 88066848 88067161 -7205490 + LTR73 LTR ERV1 17 353 -219 2 1256 1438 54 37 21 chr17 88067184 88067374 -7205277 - B2_Mm2 SINE B2 0 195 3 2 1256 218 333 125 0 chr17 88067429 88067501 -7205150 - PB1D9 SINE Alu -28 92 12 2 1256 341 80 0 39 chr17 88067527 88067579 -7205072 - ID_B1 SINE B4 0 224 175 2 1256 335 184 92 0 chr17 88067579 88067603 -7205048 - PB1D7 SINE Alu 0 120 38 2 1256 281 284 8 87 chr17 88067712 88067726 -7204925 - PB1D10 SINE Alu 0 117 5 2 1256 312 288 9 46 chr17 88067726 88067835 -7204816 - ID_B1 SINE B4 -34 190 86 2 1256 1401 55 58 27 chr17 88068035 88068199 -7204452 + B2_Mm2 SINE B2 1 175 -20 2 1256 1207 49 0 0 chr17 88068199 88068342 -7204309 + B1_Mus2 SINE Alu 1 143 -4 2 1256 312 27 0 0 chr17 88068344 88068381 -7204270 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 2 1256 1401 55 58 27 chr17 88068381 88068401 -7204250 + B2_Mm2 SINE B2 176 194 -1 2 1256 237 277 29 105 chr17 88068432 88068537 -7204114 + B1F1 SINE Alu 16 112 -37 2 1256 227 332 50 101 chr17 88068764 88069022 -7203629 - L2b LINE L2 -188 3199 2955 2 1256 246 287 78 33 chr17 88069144 88069234 -7203417 + B1F SINE Alu 2 95 -54 2 1256 188 34 0 33 chr17 88069241 88069271 -7203380 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 2 1256 428 181 30 60 chr17 88069355 88069455 -7203196 - RMER5 LTR ERV1 -2 532 436 2 1256 1143 139 121 12 chr17 88069465 88069705 -7202946 + RMER17C LTR ERVK 145 410 0 2 1256 258 127 91 45 chr17 88069705 88069766 -7202885 - RMER5 LTR ERV1 -86 448 385 2 1256 22 0 0 0 chr17 88069766 88069788 -7202863 + AT_rich Low_complexity Low_complexity 1 22 0 2 1256 474 275 48 34 chr17 88069821 88069898 -7202753 - RSINE1 SINE B4 -13 152 76 2 1256 2044 181 0 43 chr17 88069898 88070297 -7202354 + RLTR14 LTR ERV1 1 382 0 2 1256 474 275 48 34 chr17 88070297 88070366 -7202285 - RSINE1 SINE B4 -90 75 4 2 1256 531 273 76 19 chr17 88070437 88070594 -7202057 - RMER5 LTR ERV1 -331 203 38 2 1256 243 0 0 0 chr17 88070836 88070863 -7201788 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 2 1256 263 275 72 0 chr17 88070943 88071012 -7201639 - ID_B1 SINE B4 -69 155 82 2 1256 27 29 0 0 chr17 88071016 88071050 -7201601 + AT_rich Low_complexity Low_complexity 1 34 0 2 1256 267 31 0 0 chr17 88071196 88071228 -7201423 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 2 1256 649 134 163 16 chr17 88071262 88071391 -7201260 - B1_Mur3 SINE Alu -1 148 1 2 1256 30 27 0 0 chr17 88072155 88072192 -7200459 + GC_rich Low_complexity Low_complexity 1 37 0 2 1256 238 236 123 14 chr17 88072329 88072402 -7200249 - B1F1 SINE Alu -61 88 8 2 1256 216 333 10 39 chr17 88072563 88072666 -7199985 + MIR SINE MIR 2 101 -161 2 1256 189 0 0 0 chr17 88072679 88072700 -7199951 + (CTAG)n Simple_repeat Simple_repeat 3 23 0 2 1256 273 57 0 0 chr17 88072698 88072733 -7199918 + (TTTC)n Simple_repeat Simple_repeat 3 37 0 2 1256 1051 85 42 7 chr17 88072925 88073067 -7199584 - B1_Mus1 SINE Alu 0 148 2 2 1256 307 177 202 0 chr17 88073340 88073419 -7199232 - L1MB8 LINE L1 -316 5862 5768 2 1256 460 191 167 0 chr17 88073447 88073573 -7199078 - B1_Mur1 SINE Alu -2 147 1 2 1256 688 143 85 23 chr17 88074442 88074571 -7198080 + B1_Mus2 SINE Alu 1 137 -10 2 1256 23 0 0 0 chr17 88074875 88074898 -7197753 + AT_rich Low_complexity Low_complexity 1 23 0 2 1256 319 216 232 20 chr17 88074898 88074997 -7197654 - B1F2 SINE Alu 0 149 30 2 1256 357 212 283 17 chr17 88075041 88075161 -7197490 - B3 SINE B2 -4 212 61 2 1256 1451 85 5 0 chr17 88075178 88075367 -7197284 - B2_Mm1a SINE B2 -2 191 2 2 1256 278 244 211 0 chr17 88075425 88075515 -7197136 - B3 SINE B2 -6 210 102 2 1256 367 292 97 72 chr17 88075529 88075736 -7196915 - MER20 DNA MER1_type 0 219 8 2 1256 1122 194 31 0 chr17 88075770 88075966 -7196685 - B3 SINE B2 -14 202 1 2 1256 234 136 0 0 chr17 88075988 88076032 -7196619 + (TTTTTG)n Simple_repeat Simple_repeat 5 48 0 2 1256 319 279 28 37 chr17 88076032 88076140 -7196511 - B1_Mur1 SINE Alu 0 149 43 2 1256 236 307 27 0 chr17 88076826 88076901 -7195750 - ID4 SINE ID -5 78 2 2 1256 185 100 50 0 chr17 88076932 88076972 -7195679 + (TTTTG)n Simple_repeat Simple_repeat 3 44 0 2 1256 1145 62 0 7 chr17 88076972 88077119 -7195532 - B1_Mus2 SINE Alu 0 147 2 2 1256 351 304 17 25 chr17 88077261 88077379 -7195272 - PB1 SINE Alu -4 123 7 2 1256 36 40 0 0 chr17 88077945 88077995 -7194656 + AT_rich Low_complexity Low_complexity 1 50 0 2 1256 433 164 94 60 chr17 88077996 88078113 -7194538 - B3 SINE B2 -12 204 84 2 1256 324 271 201 53 chr17 88078236 88078277 -7194374 + B4 SINE B4 63 162 -130 3 1256 420 129 321 47 chr17 88078277 88078383 -7194268 + B1_Mus1 SINE Alu 12 146 -2 3 1256 324 271 201 53 chr17 88078383 88078422 -7194229 + B4 SINE B4 163 264 -28 3 1256 235 256 73 49 chr17 88078476 88078558 -7194093 - PB1D10 SINE Alu -33 84 1 3 1256 290 246 0 44 chr17 88078494 88078562 -7194089 - B4A SINE B4 -146 146 82 3 1256 272 218 49 49 chr17 88078705 88078787 -7193864 - PB1D10 SINE Alu -7 110 29 3 1256 845 124 8 8 chr17 88078813 88078943 -7193708 - B1_Mur4 SINE Alu -20 130 1 3 1256 192 40 0 0 chr17 88079032 88079057 -7193594 + (A)n Simple_repeat Simple_repeat 1 25 0 3 1256 264 222 19 0 chr17 88079477 88079531 -7193120 - tRNA-Thr-ACA tRNA tRNA -18 58 4 3 1256 449 195 168 109 chr17 88079528 88079888 -7192763 - ZP3AR Satellite Satellite -19 381 1 3 1256 906 121 36 108 chr17 88080081 88080275 -7192376 + B2_Mm2 SINE B2 10 189 -6 3 1257 241 261 90 30 chr17 88080394 88080461 -7192190 - ID4 SINE ID -11 72 2 3 1257 449 268 32 3 chr17 88080468 88080599 -7192052 - PB1D10 SINE Alu -5 144 1 3 1257 816 201 14 14 chr17 88080720 88080866 -7191785 - B1_Mus2 SINE Alu -1 146 1 3 1257 775 241 132 0 chr17 88080873 88081039 -7191612 - B3 SINE B2 -19 197 10 3 1257 244 282 25 76 chr17 88081055 88081174 -7191477 - PB1D7 SINE Alu -7 113 1 3 1257 336 302 70 75 chr17 88081174 88081256 -7191395 - ID SINE ID -141 83 3 3 1257 644 195 0 79 chr17 88081414 88081553 -7191098 - B1_Mur2 SINE Alu 0 149 22 3 1257 845 69 172 0 chr17 88081561 88081677 -7190974 + B1_Mus2 SINE Alu 2 137 -10 3 1257 405 0 0 0 chr17 88081677 88081722 -7190929 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1257 360 250 123 15 chr17 88082132 88082262 -7190389 - RSINE1 SINE B4 -18 147 4 3 1257 1009 55 0 1 chr17 88082339 88082488 -7190163 + B1_Mus2 SINE Alu 1 148 0 3 1257 500 281 95 6 chr17 88082556 88082735 -7189916 - B3A SINE B2 -2 196 2 3 1257 275 298 106 0 chr17 88082806 88082910 -7189741 + ID_B1 SINE B4 98 212 -12 3 1257 1333 78 5 37 chr17 88083160 88083347 -7189304 - B2_Mm2 SINE B2 -14 181 1 3 1257 234 0 0 0 chr17 88083350 88083376 -7189275 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1257 212 163 0 0 chr17 88083573 88083616 -7189035 + T-rich Low_complexity Low_complexity 1 43 0 3 1257 697 75 11 0 chr17 88083616 88083710 -7188941 - B1_Mus2 SINE Alu 0 147 53 3 1257 366 212 107 138 chr17 88083755 88083914 -7188737 - L1ME3A LINE L1 -202 5971 5818 3 1257 855 83 75 8 chr17 88083979 88084113 -7188538 + B1_Mur4 SINE Alu 6 148 -2 3 1257 570 256 29 0 chr17 88084226 88084363 -7188288 - B1_Mur1 SINE Alu 0 149 9 3 1257 290 290 21 41 chr17 88084599 88084696 -7187955 - PB1D10 SINE Alu -22 95 1 3 1257 21 0 0 0 chr17 88084754 88084775 -7187876 + AT_rich Low_complexity Low_complexity 1 21 0 3 1257 23 0 0 0 chr17 88084955 88084978 -7187673 + AT_rich Low_complexity Low_complexity 1 23 0 3 1257 1051 80 98 6 chr17 88085318 88085460 -7187191 + B2_Mm1a SINE B2 1 156 -37 3 1257 222 37 0 0 chr17 88085460 88085487 -7187164 + (CAAT)n Simple_repeat Simple_repeat 3 29 0 3 1257 1051 80 98 6 chr17 88085487 88085508 -7187143 + B2_Mm1a SINE B2 157 178 -15 3 1257 225 132 0 0 chr17 88085996 88086034 -7186617 + (CAGG)n Simple_repeat Simple_repeat 2 39 0 3 1257 299 261 0 93 chr17 88086075 88086172 -7186479 - RSINE1 SINE B4 -70 95 8 3 1257 337 260 182 44 chr17 88086172 88086309 -7186342 - ID_B1 SINE B4 -67 157 2 3 1257 1512 53 16 5 chr17 88086320 88086511 -7186140 - B2_Mm2 SINE B2 0 195 3 3 1257 601 298 82 0 chr17 88086666 88086837 -7185814 - B3 SINE B2 -31 185 1 3 1257 425 304 118 0 chr17 88086878 88087013 -7185638 + RSINE1 SINE B4 12 162 -3 3 1257 338 260 80 0 chr17 88087454 88087554 -7185097 - PB1 SINE Alu -2 125 18 3 1257 668 12 0 12 chr17 88087622 88087704 -7184947 + (TCCCC)n Simple_repeat Simple_repeat 5 85 0 3 1257 318 94 37 19 chr17 88087704 88087750 -7184901 - B1_Mur4 SINE Alu -12 138 91 3 1257 348 127 0 0 chr17 88087750 88087805 -7184846 + (TCC)n Simple_repeat Simple_repeat 1 55 0 3 1257 1227 119 0 11 chr17 88087805 88087984 -7184667 - B2_Mm2 SINE B2 -17 178 2 3 1257 587 203 90 14 chr17 88088093 88088238 -7184413 - RSINE1 SINE B4 -2 163 8 3 1257 473 197 145 0 chr17 88088624 88088741 -7183910 - RLTR28B LTR ERVL -325 156 23 3 1257 211 333 62 56 chr17 88088993 88089171 -7183480 - B4A SINE B4 -113 179 1 3 1257 576 236 8 8 chr17 88089488 88089616 -7183035 - RSINE1 SINE B4 -35 130 3 3 1257 320 268 35 47 chr17 88089698 88089784 -7182867 + B4A SINE B4 128 212 -80 3 1257 360 181 496 16 chr17 88089791 88089920 -7182731 + B2_Mm2 SINE B2 1 191 -4 3 1257 184 268 0 101 chr17 88090012 88090091 -7182560 - L4 LINE RTE -210 1819 1749 3 1257 221 305 170 30 chr17 88090116 88090251 -7182400 + RSINE1 SINE B4 4 157 -8 3 1257 351 165 112 45 chr17 88090578 88090667 -7181984 - B1F2 SINE Alu -10 139 45 3 1257 324 0 0 0 chr17 88090706 88090742 -7181909 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 3 1257 419 256 19 16 chr17 88090778 88090905 -7181746 + B1_Mur2 SINE Alu 15 142 -7 3 1257 383 0 21 0 chr17 88090909 88090956 -7181695 + (ACTG)n Simple_repeat Simple_repeat 2 49 0 3 1257 380 20 20 0 chr17 88091140 88091189 -7181462 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1257 262 286 225 26 chr17 88091525 88091676 -7180975 - 7SK RNA RNA -92 239 59 3 1257 617 170 9 9 chr17 88091884 88091905 -7180746 - B3 SINE B2 -101 115 95 3 1257 339 96 0 0 chr17 88091905 88091957 -7180694 + (CCCTAA)n Simple_repeat Simple_repeat 1 52 0 3 1257 617 170 9 9 chr17 88091957 88092048 -7180603 - B3 SINE B2 -122 94 3 3 1257 229 209 53 95 chr17 88092048 88092117 -7180534 + Charlie11 DNA MER1_type 1731 1795 -401 3 1257 991 199 26 10 chr17 88092277 88092470 -7180181 + B3 SINE B2 9 204 -12 3 1257 478 246 166 40 chr17 88092504 88092653 -7179998 + B1F SINE Alu 2 150 0 3 1257 645 231 37 31 chr17 88092865 88093026 -7179625 - B3 SINE B2 -51 165 4 3 1257 483 250 122 44 chr17 88093038 88093218 -7179433 - Charlie4a DNA MER1_type -5 503 310 3 1257 821 40 0 0 chr17 88093246 88093346 -7179305 - B1_Mm SINE Alu 0 147 48 3 1257 479 280 85 64 chr17 88093348 88093550 -7179101 - B3A SINE B2 -3 213 1 3 1257 673 249 38 14 chr17 88094257 88094434 -7178217 + B3 SINE B2 8 179 -16 3 1257 272 229 16 16 chr17 88094458 88094520 -7178131 + PB1D7 SINE Alu 1 62 -58 3 1257 592 274 41 46 chr17 88094605 88094800 -7177851 - B3A SINE B2 -2 196 3 3 1257 1178 41 0 39 chr17 88097578 88097731 -7174920 - B1_Mus2 SINE Alu 0 147 1 3 1257 2039 122 67 18 chr17 88097854 88098196 -7174455 - RLTR15 LTR ERVK 0 359 1 3 1257 257 300 9 43 chr17 88098809 88098924 -7173727 + G-rich Low_complexity Low_complexity 6 116 0 3 1257 21 0 0 0 chr17 88100214 88100235 -7172416 + AT_rich Low_complexity Low_complexity 1 21 0 3 1257 1912 127 67 35 chr17 88100361 88100704 -7171947 + ORR1B1 LTR MaLR 41 394 0 3 1257 372 186 307 0 chr17 88100756 88100870 -7171781 - B3 SINE B2 0 216 68 3 1257 1626 270 67 45 chr17 88100889 88101487 -7171164 - Lx8 LINE L1 -244 7229 6619 3 1257 1962 176 109 0 chr17 88101506 88101881 -7170770 + MTC LTR MaLR 6 421 0 3 1257 214 217 87 0 chr17 88101945 88101991 -7170660 - RSINE1 SINE B4 -114 51 2 3 1257 418 239 196 35 chr17 88102155 88102328 -7170323 - MTD LTR MaLR -178 241 41 3 1257 357 255 55 64 chr17 88102433 88102542 -7170109 - B1_Mur1 SINE Alu -40 109 2 3 1257 640 233 52 43 chr17 88102720 88102931 -7169720 + B3 SINE B2 2 214 -2 3 1257 270 0 0 0 chr17 88103141 88103171 -7169480 + (TCTG)n Simple_repeat Simple_repeat 3 32 0 3 1257 510 251 30 112 chr17 88103439 88103636 -7169015 - B3 SINE B2 -2 214 34 3 1257 783 188 14 0 chr17 88104183 88104327 -7168324 - B1_Mus2 SINE Alu 0 147 2 3 1257 21 0 0 0 chr17 88104746 88104767 -7167884 + AT_rich Low_complexity Low_complexity 1 21 0 3 1257 383 255 98 0 chr17 88105296 88105398 -7167253 + B1_Mus2 SINE Alu 1 112 -8 3 1257 1277 41 0 0 chr17 88105449 88105596 -7167055 + B1_Mm SINE Alu 1 147 0 3 1257 432 222 56 0 chr17 88105680 88105770 -7166881 + B1_Mur3 SINE Alu 1 95 -54 3 1257 502 230 0 91 chr17 88105766 88105876 -7166775 - B1_Mur3 SINE Alu -48 101 2 3 1257 512 244 16 24 chr17 88105959 88106085 -7166566 - RSINE1 SINE B4 -36 129 5 3 1257 414 240 105 46 chr17 88107181 88107334 -7165317 + RSINE1 SINE B4 4 165 0 3 1257 584 265 124 5 chr17 88108251 88108437 -7164214 - B3 SINE B2 -7 209 2 3 1257 10964 136 25 18 chr17 88108648 88108680 -7163971 + Lx LINE L1 4067 4095 -1788 3 1257 1116 119 15 45 chr17 88108680 88108882 -7163769 - Lx LINE L1 0 6654 6459 3 1257 10964 120 27 12 chr17 88108882 88111195 -7161456 + Lx LINE L1 4096 6449 -205 3 1257 756 183 84 22 chr17 88111414 88111593 -7161058 - B2_Mm2 SINE B2 -1 194 5 3 1257 378 42 0 0 chr17 88112179 88112227 -7160424 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1257 450 291 51 8 chr17 88112227 88112345 -7160306 - RSINE1 SINE B4 -40 125 3 3 1257 339 158 0 128 chr17 88112397 88112585 -7160066 + (TTGTG)n Simple_repeat Simple_repeat 2 165 0 3 1257 299 145 0 132 chr17 88112726 88112885 -7159766 + (TTGTG)n Simple_repeat Simple_repeat 2 139 0 4 1257 297 150 0 136 chr17 88113110 88113339 -7159312 + (TTGTG)n Simple_repeat Simple_repeat 1 197 0 4 1257 268 153 0 142 chr17 88113385 88113575 -7159076 + (TTGTG)n Simple_repeat Simple_repeat 2 164 0 4 1257 1509 33 50 0 chr17 88113832 88114012 -7158639 - B2_Mm2 SINE B2 -6 189 1 4 1257 505 279 6 120 chr17 88114992 88115167 -7157484 + RSINE1 SINE B4 3 157 -8 4 1257 28 0 0 0 chr17 88115183 88115211 -7157440 + AT_rich Low_complexity Low_complexity 1 28 0 4 1257 431 266 119 16 chr17 88115296 88115422 -7157229 - B2_Mm2 SINE B2 -56 139 1 4 1257 354 250 35 23 chr17 88115507 88115593 -7157058 + PB1D9 SINE Alu 8 94 -26 4 1257 1260 35 0 0 chr17 88115629 88115773 -7156878 - B1_Mm SINE Alu -3 144 1 4 1257 499 202 17 50 chr17 88115892 88116012 -7156639 + PB1D9 SINE Alu 5 120 0 4 1257 826 137 6 76 chr17 88116383 88116541 -7156110 - B1_Mus2 SINE Alu 0 147 1 4 1257 685 221 14 7 chr17 88118303 88118444 -7154207 + B1_Mur2 SINE Alu 1 142 -7 4 1257 456 296 68 23 chr17 88119123 88119299 -7153352 - B3A SINE B2 -1 197 14 4 1257 223 178 0 0 chr17 88119543 88119588 -7153063 + T-rich Low_complexity Low_complexity 1 45 0 4 1257 375 277 26 145 chr17 88120561 88120713 -7151938 - B1_Mur1 SINE Alu -6 143 10 4 1257 795 115 0 0 chr17 88120722 88120852 -7151799 + (TC)n Simple_repeat Simple_repeat 1 130 0 4 1257 388 298 65 19 chr17 88121821 88121975 -7150676 - RSINE1 SINE B4 -3 162 2 4 1257 305 235 0 49 chr17 88122093 88122186 -7150465 - MIR SINE MIR -43 225 135 4 1257 495 305 7 7 chr17 88122487 88122629 -7150022 + B3A SINE B2 35 176 -22 4 1257 375 300 111 31 chr17 88123266 88123527 -7149124 + L1MB7 LINE L1 5630 5911 -273 4 1257 500 169 118 8 chr17 88124112 88124231 -7148420 - B3 SINE B2 -80 136 5 4 1257 228 250 0 16 chr17 88124546 88124607 -7148044 - PB1D10 SINE Alu -17 100 41 4 1257 577 170 17 26 chr17 88124663 88124778 -7147873 - PB1D9 SINE Alu -6 114 1 4 1257 722 243 22 17 chr17 88125129 88125309 -7147342 + B3A SINE B2 2 182 -16 4 1257 435 113 385 2 chr17 88125538 88125644 -7147007 + B1_Mm SINE Alu 1 140 -8 4 1257 444 67 0 0 chr17 88125757 88125817 -7146834 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 1257 182 91 30 0 chr17 88126346 88126379 -7146272 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 4 1257 376 169 216 13 chr17 88126420 88126532 -7146119 + B1F2 SINE Alu 13 149 0 4 1257 452 245 69 3 chr17 88126854 88126976 -7145675 - PB1D7 SINE Alu -22 127 6 4 1257 666 279 76 9 chr17 88127301 88127511 -7145140 - ID_B1 SINE B4 0 224 1 4 1257 769 233 47 0 chr17 88127769 88127941 -7144710 - ORR1D1 LTR MaLR 0 374 195 4 1257 658 143 19 9 chr17 88127949 88128055 -7144596 - B1_Mur2 SINE Alu -1 148 42 4 1257 224 0 0 157 chr17 88128058 88128166 -7144485 + (CTCTG)n Simple_repeat Simple_repeat 5 95 0 4 1257 387 152 0 33 chr17 88128167 88128228 -7144423 - B1_Mus2 SINE Alu -88 59 1 4 1257 1147 209 9 0 chr17 88128228 88128435 -7144216 - ORR1D1 LTR MaLR -165 209 1 4 1257 3861 187 81 10 chr17 88128435 88129209 -7143442 - ORR1D1-int LTR MaLR -1 1369 541 4 1257 1999 171 55 3 chr17 88129251 88129433 -7143218 - ORR1D1-int LTR MaLR -903 467 275 4 1257 180 0 0 0 chr17 88129433 88129453 -7143198 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 1257 1999 171 55 3 chr17 88129453 88129650 -7143001 - ORR1D1-int LTR MaLR -1096 274 68 4 1257 789 143 16 8 chr17 88129648 88129775 -7142876 + B1_Mur4 SINE Alu 23 150 0 4 1257 285 128 0 0 chr17 88129777 88129824 -7142827 + (CGTG)n Simple_repeat Simple_repeat 1 47 0 4 1257 942 189 128 0 chr17 88129868 88130064 -7142587 - ORR1D1 LTR MaLR -1 373 153 4 1257 318 212 0 48 chr17 88130672 88130756 -7141895 + L1M2 LINE L1 4751 4830 -1313 4 1257 1136 269 36 43 chr17 88130739 88130987 -7141664 + L1M2 LINE L1 4619 4872 -1271 4 1257 183 42 0 0 chr17 88130987 88131011 -7141640 + (CAAAC)n Simple_repeat Simple_repeat 1 24 0 4 1257 1136 269 36 43 chr17 88131011 88131045 -7141606 + L1M2 LINE L1 4873 4900 -1243 4 1257 1647 31 0 20 chr17 88131045 88131242 -7141409 + B2_Mm1a SINE B2 1 193 0 4 1257 1136 271 39 44 chr17 88131242 88131428 -7141223 + L1M2 LINE L1 4898 5085 -1055 4 1257 422 261 130 68 chr17 88132276 88132539 -7140112 + B4A SINE B4 15 271 -21 4 1257 459 0 0 0 chr17 88132545 88132596 -7140055 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1257 306 0 0 0 chr17 88132596 88132629 -7140022 + (GA)n Simple_repeat Simple_repeat 2 35 0 4 1257 350 213 11 0 chr17 88132646 88132740 -7139911 + (TGGA)n Simple_repeat Simple_repeat 1 95 0 4 1257 828 156 21 14 chr17 88132850 88132993 -7139658 + B1_Mur4 SINE Alu 1 144 -6 4 1257 268 43 43 0 chr17 88133713 88133759 -7138892 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1257 287 300 40 60 chr17 88134161 88134310 -7138341 - MTEa LTR MaLR 0 379 234 4 1257 299 257 6 39 chr17 88134490 88134668 -7137983 + (CATCC)n Simple_repeat Simple_repeat 1 172 0 4 1257 266 188 198 12 chr17 88134673 88134754 -7137897 - MTEa LTR MaLR -244 135 40 4 1257 3657 92 22 7 chr17 88135246 88136126 -7136525 + RLTR13C1 LTR ERVK 1 983 0 4 1257 289 213 53 13 chr17 88136318 88136394 -7136257 + PB1 SINE Alu 46 124 -3 4 1257 450 205 92 64 chr17 88136492 88136633 -7136018 - B3 SINE B2 -5 211 67 4 1257 334 262 23 13 chr17 88136637 88136757 -7135894 + LTR33B LTR ERVL 44 167 -364 4 1257 264 271 23 23 chr17 88137142 88137229 -7135422 + MLT1J LTR MaLR 424 510 -2 4 1257 701 215 7 22 chr17 88137604 88137742 -7134909 + B1_Mur2 SINE Alu 2 137 -12 4 1257 861 96 27 0 chr17 88137742 88137888 -7134763 + (GAAA)n Simple_repeat Simple_repeat 3 152 0 4 1257 420 344 52 13 chr17 88138054 88138207 -7134444 - RSINE1 SINE B4 -3 162 4 4 1257 770 176 108 49 chr17 88139276 88139479 -7133172 - B3 SINE B2 0 216 2 4 1257 342 80 0 0 chr17 88139877 88139927 -7132724 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1257 387 0 0 0 chr17 88142266 88142309 -7130342 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1257 369 0 0 0 chr17 88143686 88143727 -7128924 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1257 195 42 0 0 chr17 88144614 88144638 -7128013 + (TGGGGG)n Simple_repeat Simple_repeat 6 29 0 4 1257 29 70 0 0 chr17 88145221 88145278 -7127373 + GC_rich Low_complexity Low_complexity 1 57 0 4 1257 810 200 0 14 chr17 88147525 88147667 -7124984 + ID_B1 SINE B4 85 224 0 4 1257 2217 154 68 63 chr17 88147739 88148269 -7124382 + RMER21A LTR ERV1 28 497 -450 4 1257 417 97 147 13 chr17 88148259 88148369 -7124282 + RMER21A LTR ERV1 285 500 -447 4 1257 268 77 0 0 chr17 88148349 88148388 -7124263 + RMER21A LTR ERV1 414 452 -495 4 1257 2075 126 46 44 chr17 88148388 88148754 -7123897 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1257 19449 17 12 15 chr17 88148754 88151100 -7121551 + IAPEz-int LTR ERVK 8 2345 -4136 4 1257 15865 21 2 3 chr17 88151099 88152970 -7119681 + IAPEz-int LTR ERVK 4613 6481 0 4 1257 2075 126 46 44 chr17 88152970 88153336 -7119315 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1257 360 175 0 72 chr17 88153356 88153467 -7119184 + RMER21A LTR ERV1 395 497 -450 4 1257 471 143 9 66 chr17 88153467 88153605 -7119046 + RMER21A LTR ERV1 269 509 -438 4 1257 298 47 0 0 chr17 88153600 88153643 -7119008 + RMER21A LTR ERV1 400 442 -505 4 1257 443 152 1 71 chr17 88153634 88153773 -7118878 + RMER21A LTR ERV1 269 499 -448 4 1257 443 143 0 71 chr17 88153787 88153900 -7118751 + RMER21A LTR ERV1 395 499 -448 4 1257 456 56 180 0 chr17 88153907 88153996 -7118655 + RMER21A LTR ERV1 395 499 -448 4 1257 2718 140 118 33 chr17 88154003 88154513 -7118138 + RMER21A LTR ERV1 395 947 0 4 1257 303 281 45 104 chr17 88154513 88154643 -7118008 + B3A SINE B2 57 180 -18 4 1257 351 0 0 0 chr17 88154786 88154825 -7117826 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 1257 225 253 74 25 chr17 88155104 88155185 -7117466 - BC1_Mm scRNA scRNA -62 90 6 4 1257 360 193 0 0 chr17 88155510 88155624 -7117027 + G-rich Low_complexity Low_complexity 1 114 0 4 1257 216 111 0 0 chr17 88155627 88155663 -7116988 + (CTG)n Simple_repeat Simple_repeat 1 36 0 4 1257 366 286 66 16 chr17 88155676 88155728 -7116923 - ID_B1 SINE B4 -7 217 166 4 1257 3601 20 0 0 chr17 88155728 88156122 -7116529 + MTA_Mm LTR MaLR 3 396 0 4 1257 366 286 66 16 chr17 88156122 88156190 -7116461 - ID_B1 SINE B4 -59 165 92 4 1257 258 253 125 11 chr17 88156530 88156618 -7116033 + ORR1E LTR MaLR 2 99 -260 4 1257 419 237 113 0 chr17 88159092 88159189 -7113462 - PB1D7 SINE Alu -8 112 5 4 1257 673 211 44 29 chr17 88159388 88159571 -7113080 + B3 SINE B2 1 198 0 4 1257 238 281 23 68 chr17 88159999 88160087 -7112564 + Kanga1 DNA Tc2 1 84 -1661 4 1257 1097 49 51 0 chr17 88161271 88161765 -7110886 + (TAGA)n Simple_repeat Simple_repeat 1 519 0 4 1257 917 82 41 0 chr17 88161784 88161955 -7110696 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 4 1257 210 71 0 0 chr17 88161955 88161983 -7110668 + (CAGA)n Simple_repeat Simple_repeat 1 28 0 4 1257 1747 171 50 58 chr17 88164042 88164421 -7108230 + ORR1C1 LTR MaLR 1 376 -2 4 1257 664 242 12 50 chr17 88164775 88164936 -7107715 - RSINE1 SINE B4 -7 158 4 4 1257 596 302 278 11 chr17 88165316 88165786 -7106865 - MER90 LTR ERV1 -15 599 4 4 1257 254 273 0 0 chr17 88166024 88166085 -7106566 - ID4_ SINE ID -57 95 35 4 1257 264 349 68 64 chr17 88166391 88166627 -7106024 - L2a LINE L2 -7 3419 3183 4 1257 396 97 0 0 chr17 88166975 88167037 -7105614 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 1257 274 339 241 11 chr17 88167512 88167703 -7104948 + MIRb SINE MIR 19 253 -15 4 1257 23 68 0 0 chr17 88168019 88168063 -7104588 + AT_rich Low_complexity Low_complexity 1 44 0 4 1257 557 264 167 6 chr17 88168065 88168221 -7104430 - B3A SINE B2 -15 183 3 4 1257 1152 260 86 26 chr17 88168250 88168599 -7104052 + MTE2a LTR MaLR 1 370 0 4 1257 407 272 173 10 chr17 88168635 88168843 -7103808 + L4 LINE RTE 1513 1754 -275 4 1257 2048 128 103 39 chr17 88168862 88169269 -7103382 - RMER4A LTR ERVK -33 433 1 4 1257 837 141 0 0 chr17 88169269 88169397 -7103254 - MurERV4-int LTR ERVK 0 5260 5133 4 1257 2016 178 28 0 chr17 88169386 88169746 -7102905 - MurERV4-int LTR ERVK -3135 2125 1756 4 1257 410 96 0 14 chr17 88169746 88169820 -7102831 - RMER4B LTR ERVK -512 73 1 4 1257 206 62 0 30 chr17 88169922 88169955 -7102696 + (TTA)n Simple_repeat Simple_repeat 2 33 0 4 1257 412 271 128 7 chr17 88170757 88170898 -7101753 + RSINE1 SINE B4 2 159 -6 4 1257 481 315 0 47 chr17 88170933 88171103 -7101548 + RSINE1 SINE B4 4 165 0 4 1257 521 314 8 0 chr17 88171157 88171275 -7101376 + PB1D7 SINE Alu 1 119 -1 4 1257 742 200 17 86 chr17 88171277 88171452 -7101199 + RSINE1 SINE B4 3 165 0 5 1257 1182 43 0 0 chr17 88171565 88171703 -7100948 - B1_Mus1 SINE Alu -9 139 2 5 1257 1433 73 6 0 chr17 88171709 88171886 -7100765 - B2_Mm2 SINE B2 -17 178 1 5 1257 363 284 0 0 chr17 88171900 88171981 -7100670 - PB1D10 SINE Alu -31 86 6 5 1257 841 264 10 15 chr17 88172301 88172379 -7100272 + ID SINE ID 8 84 -140 5 1257 384 322 27 34 chr17 88172379 88172527 -7100124 + B1F SINE Alu 3 149 0 5 1257 780 213 104 65 chr17 88172615 88172816 -7099835 - B3 SINE B2 -1 215 7 5 1257 464 126 0 94 chr17 88172864 88173358 -7099293 + (CCA)n Simple_repeat Simple_repeat 1 447 0 5 1257 187 273 18 18 chr17 88173843 88173899 -7098752 - MER5A DNA MER1_type -68 121 66 5 1257 255 311 0 0 chr17 88174099 88174173 -7098478 + (TG)n Simple_repeat Simple_repeat 1 74 0 5 1257 585 0 0 0 chr17 88174865 88174930 -7097721 + (TCCC)n Simple_repeat Simple_repeat 4 68 0 5 1257 1202 68 0 0 chr17 88174938 88175085 -7097566 - B1_Mus1 SINE Alu 0 148 2 5 1257 350 246 163 8 chr17 88175143 88175266 -7097385 - RSINE1 SINE B4 -2 163 22 5 1257 699 156 66 0 chr17 88175301 88175423 -7097228 - B1_Mur1 SINE Alu -7 142 13 5 1257 208 375 11 0 chr17 88175784 88175872 -7096779 + MIRc SINE MIR 30 118 -150 5 1257 814 223 100 11 chr17 88175891 88176081 -7096570 - B3 SINE B2 0 216 10 5 1257 180 330 135 11 chr17 88176113 88176202 -7096449 + MIRc SINE MIR 113 212 -56 5 1257 265 226 0 31 chr17 88177548 88177612 -7095039 - B3 SINE B2 -1 215 154 5 1257 262 212 60 15 chr17 88177596 88177663 -7094988 - ID_B1 SINE B4 -123 101 32 5 1257 336 359 158 0 chr17 88177685 88177869 -7094782 + L2a LINE L2 3214 3426 0 5 1257 189 121 0 0 chr17 88178615 88178648 -7094003 + (TCTG)n Simple_repeat Simple_repeat 3 35 0 5 1257 407 68 0 17 chr17 88178683 88178743 -7093908 + (TTCTC)n Simple_repeat Simple_repeat 5 63 0 5 1257 970 92 34 17 chr17 88178738 88178848 -7093803 + (TCTCCC)n Simple_repeat Simple_repeat 6 114 0 5 1257 594 0 0 0 chr17 88178848 88178914 -7093737 + (TTCTC)n Simple_repeat Simple_repeat 5 70 0 5 1257 970 92 34 17 chr17 88178914 88178980 -7093671 + (TCTCCC)n Simple_repeat Simple_repeat 1 71 0 5 1257 471 201 7 32 chr17 88178975 88179129 -7093522 + CT-rich Low_complexity Low_complexity 2 151 0 5 1257 394 299 89 57 chr17 88179141 88179265 -7093386 - B3A SINE B2 -23 175 48 5 1257 333 0 0 0 chr17 88179374 88179411 -7093240 + (TC)n Simple_repeat Simple_repeat 1 37 0 5 1257 659 269 7 7 chr17 88180200 88180342 -7092309 + ID_B1 SINE B4 82 223 -1 5 1257 253 206 25 76 chr17 88180940 88181019 -7091632 - YREP_Mm Unknown Unknown -1485 327 253 5 1257 411 271 47 0 chr17 88180964 88181071 -7091580 + B1F SINE Alu 8 119 -30 5 1257 504 243 9 0 chr17 88180978 88181085 -7091566 + ID_B1 SINE B4 105 212 -12 5 1257 916 139 0 0 chr17 88181463 88181600 -7091051 - B1_Mur3 SINE Alu -6 143 7 5 1257 4826 154 62 18 chr17 88181602 88182460 -7090191 + RMER19B LTR ERVK 1 896 -6 5 1257 676 246 35 7 chr17 88182476 88182619 -7090032 - B1F2 SINE Alu -2 147 1 5 1257 378 0 0 0 chr17 88184275 88184317 -7088334 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1257 285 98 0 0 chr17 88184649 88184690 -7087961 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 5 1257 196 285 19 24 chr17 88184691 88184773 -7087878 - L2a LINE L2 -2 3424 3299 5 1257 207 0 0 0 chr17 88185677 88185700 -7086951 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1257 929 278 9 5 chr17 88186110 88186327 -7086324 + ID_B1 SINE B4 1 218 -6 5 1257 314 261 0 30 chr17 88186408 88186475 -7086176 + B1F1 SINE Alu 2 66 -83 5 1257 394 192 216 36 chr17 88186715 88186882 -7085769 + RMER20B LTR ERVK 203 399 -228 5 1257 350 212 49 24 chr17 88186960 88187042 -7085609 + ID_B1 SINE B4 139 222 -2 5 1257 3538 164 35 56 chr17 88187291 88187369 -7085282 + MTC-int LTR MaLR 557 640 -618 5 1257 1676 36 0 0 chr17 88187369 88187562 -7085089 + B2_Mm1a SINE B2 1 193 0 5 1257 3538 164 35 56 chr17 88187562 88188199 -7084452 + MTC-int LTR MaLR 641 1257 -1 5 1257 956 199 86 47 chr17 88188202 88188392 -7084259 + MTC LTR MaLR 3 205 -216 5 1257 1606 47 0 15 chr17 88188392 88188587 -7084064 + B2_Mm1a SINE B2 1 192 -1 5 1257 956 170 39 32 chr17 88188587 88188679 -7083972 + MTC LTR MaLR 206 361 -9 5 1257 441 156 0 0 chr17 88188717 88188794 -7083857 + A-rich Low_complexity Low_complexity 1 77 0 5 1257 1033 234 33 5 chr17 88188804 88189014 -7083637 - B3 SINE B2 0 216 1 5 1257 392 268 21 79 chr17 88189014 88189144 -7083507 - B4 SINE B4 -54 238 113 5 1257 242 309 100 7 chr17 88189208 88189348 -7083303 + MER5A1 DNA MER1_type 11 163 -3 5 1257 229 305 268 0 chr17 88190591 88190673 -7081978 + B1F SINE Alu 2 105 -44 5 1257 245 343 20 19 chr17 88191302 88191446 -7081205 + L1M5 LINE L1 5616 5760 -2122 5 1257 30 0 0 0 chr17 88191956 88191986 -7080665 + AT_rich Low_complexity Low_complexity 1 30 0 5 1257 305 62 21 0 chr17 88193272 88193320 -7079331 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1257 210 150 0 0 chr17 88194010 88194050 -7078601 + (TTG)n Simple_repeat Simple_repeat 3 42 0 5 1257 971 39 78 0 chr17 88194050 88194179 -7078472 - B1_Mus1 SINE Alu -5 143 5 5 1257 21 0 0 0 chr17 88195061 88195082 -7077569 + AT_rich Low_complexity Low_complexity 1 21 0 5 1257 387 0 0 0 chr17 88195196 88195239 -7077412 + (GA)n Simple_repeat Simple_repeat 1 43 0 5 1257 387 0 0 0 chr17 88195665 88195708 -7076943 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1257 186 182 30 15 chr17 88196707 88196774 -7075877 + (CGG)n Simple_repeat Simple_repeat 3 70 0 5 1257 598 253 30 67 chr17 88200048 88200085 -7072566 - RSINE1 SINE B4 -4 161 126 5 1257 279 0 0 0 chr17 88200085 88200116 -7072535 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 1257 486 0 0 0 chr17 88200116 88200169 -7072482 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 1257 598 253 30 67 chr17 88200169 88200295 -7072356 - RSINE1 SINE B4 -40 125 4 5 1257 746 170 7 0 chr17 88200433 88200580 -7072071 + CT-rich Low_complexity Low_complexity 3 150 0 5 1257 1146 75 0 13 chr17 88200580 88200729 -7071922 - B1_Mus1 SINE Alu 0 148 2 5 1257 446 383 64 21 chr17 88200903 88201183 -7071468 + L1MB8 LINE L1 5752 6043 -135 5 1257 339 322 20 53 chr17 88201318 88201469 -7071182 + B1F SINE Alu 1 146 -3 5 1257 570 29 0 0 chr17 88201489 88201557 -7071094 + (TTCC)n Simple_repeat Simple_repeat 1 68 0 5 1257 407 230 92 0 chr17 88201562 88201649 -7071002 - B1_Mur3 SINE Alu -51 98 4 5 1257 629 226 149 0 chr17 88201692 88201887 -7070764 + ID_B1 SINE B4 1 224 0 5 1257 858 178 7 0 chr17 88202224 88202370 -7070281 - B1_Mur1 SINE Alu -1 148 2 5 1257 26265 122 24 15 chr17 88202370 88205630 -7067021 - L1_Mus4 LINE L1 -237 6399 3133 5 1257 207 0 0 0 chr17 88205630 88205653 -7066998 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1257 26265 146 16 16 chr17 88205653 88208224 -7064427 - L1_Mus4 LINE L1 -2751 3132 541 5 1257 868 296 68 3 chr17 88208229 88208595 -7064056 - L1M2 LINE L1 -524 5776 5387 5 1257 3236 150 49 45 chr17 88208630 88209201 -7063450 - RLTR20B3 LTR ERVK 0 577 5 5 1257 2582 311 78 26 chr17 88209207 88209479 -7063172 - L1M2 LINE L1 -801 5342 5075 5 1257 963 104 15 0 chr17 88209479 88209613 -7063038 + B1_Mus1 SINE Alu 1 136 -12 5 1257 219 36 0 0 chr17 88209614 88209642 -7063009 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 5 1257 432 0 0 0 chr17 88209647 88209695 -7062956 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 5 1257 2582 311 78 26 chr17 88209695 88211098 -7061553 - L1M2 LINE L1 -1079 5064 3571 5 1257 22 0 0 0 chr17 88211336 88211358 -7061293 + AT_rich Low_complexity Low_complexity 1 22 0 5 1258 305 258 15 0 chr17 88212217 88212283 -7060368 + ID4 SINE ID 4 70 -13 5 1258 381 190 0 0 chr17 88212310 88212342 -7060309 + polypurine Low_complexity Low_complexity 1 32 0 5 1258 1326 78 0 0 chr17 88212342 88212522 -7060129 + (GAA)n Simple_repeat Simple_repeat 1 180 0 5 1258 381 190 0 0 chr17 88212522 88212545 -7060106 + polypurine Low_complexity Low_complexity 33 55 0 5 1258 1287 84 0 0 chr17 88212545 88212723 -7059928 + (GAA)n Simple_repeat Simple_repeat 3 180 0 5 1258 381 190 0 0 chr17 88212723 88212766 -7059885 + polypurine Low_complexity Low_complexity 56 98 0 5 1258 466 266 69 46 chr17 88212791 88212921 -7059730 + B1F SINE Alu 12 144 -5 5 1258 522 268 70 32 chr17 88213120 88213278 -7059373 + ORR1E LTR MaLR 10 173 -186 5 1258 2776 31 65 0 chr17 88213298 88213623 -7059028 - ORR1A1 LTR MaLR 0 346 1 5 1258 227 220 164 78 chr17 88214077 88214205 -7058446 - RSINE1 SINE B4 -4 161 23 5 1258 327 315 62 9 chr17 88214294 88214406 -7058245 + RSINE1 SINE B4 2 119 -46 5 1258 387 0 0 0 chr17 88214434 88214477 -7058174 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 1258 778 178 15 0 chr17 88214499 88214634 -7058017 + B1_Mur1 SINE Alu 2 138 -11 5 1258 241 361 0 0 chr17 88214695 88214767 -7057884 - ID4_ SINE ID -11 72 1 5 1258 444 82 0 0 chr17 88215295 88215356 -7057295 + (GA)n Simple_repeat Simple_repeat 1 61 0 5 1258 684 188 0 57 chr17 88215481 88215622 -7057029 - B1_Mur1 SINE Alu -2 147 15 5 1258 278 332 65 16 chr17 88215520 88215656 -7056995 - B4 SINE B4 -94 198 60 5 1258 501 127 10 19 chr17 88215656 88215760 -7056891 + GA-rich Low_complexity Low_complexity 1 103 0 5 1258 417 103 0 0 chr17 88215806 88215874 -7056777 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 1258 416 328 98 44 chr17 88216385 88216685 -7055966 + ORR1E LTR MaLR 29 344 -15 5 1258 967 216 59 78 chr17 88217443 88217765 -7054886 + RLTR11A2 LTR ERVK 1 316 -211 5 1258 1712 144 141 3 chr17 88217771 88218077 -7054574 - ORR1B1 LTR MaLR 0 394 47 5 1258 381 279 54 54 chr17 88218121 88218167 -7054484 + RLTR11A2 LTR ERVK 284 330 -123 5 1258 4914 106 18 45 chr17 88218167 88218998 -7053653 + RMER17D2 LTR ERVK 1 809 0 5 1258 381 279 54 54 chr17 88218998 88219099 -7053552 + RLTR11A2 LTR ERVK 331 431 -22 5 1258 207 88 0 0 chr17 88219331 88219365 -7053286 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 1258 572 254 38 7 chr17 88219553 88219806 -7052845 - RMER15 LTR ERVL 0 575 289 6 1258 439 273 24 72 chr17 88219802 88219968 -7052683 - RMER15 LTR ERVL -417 158 1 6 1258 273 326 34 34 chr17 88220077 88220166 -7052485 + PB1D10 SINE Alu 8 96 -21 6 1258 4326 118 49 15 chr17 88220207 88220863 -7051788 - RLTR33 LTR ERVK 0 678 1 6 1258 428 273 31 15 chr17 88221048 88221178 -7051473 + B3A SINE B2 5 136 -62 6 1258 253 375 49 24 chr17 88221296 88221419 -7051232 - LTR48 LTR ERV1 -47 740 615 6 1258 536 254 79 7 chr17 88221432 88221571 -7051080 + B1F1 SINE Alu 1 149 0 6 1258 234 286 0 0 chr17 88221620 88221669 -7050982 + ID4_ SINE ID 30 78 -5 6 1258 224 77 0 25 chr17 88221982 88222022 -7050629 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 1258 716 253 134 46 chr17 88222307 88222568 -7050083 + B4 SINE B4 1 284 -8 6 1258 244 253 22 22 chr17 88222577 88222666 -7049985 + G-rich Low_complexity Low_complexity 1 89 0 6 1258 252 317 68 19 chr17 88222742 88222845 -7049806 + LTR48 LTR ERV1 174 281 -506 6 1258 413 216 252 25 chr17 88222859 88222874 -7049777 + ID_B1 SINE B4 79 157 -67 6 1258 505 223 32 0 chr17 88222874 88222968 -7049683 + PB1D10 SINE Alu 13 109 -8 6 1258 436 248 110 28 chr17 88223080 88223225 -7049426 - L1MB5 LINE L1 -285 5889 5733 6 1258 918 114 0 22 chr17 88223227 88223361 -7049290 + RLTR20B2 LTR ERVK 1 131 -429 6 1258 642 47 0 0 chr17 88223361 88223447 -7049204 + (GA)n Simple_repeat Simple_repeat 2 87 0 6 1258 1234 156 88 13 chr17 88223450 88223720 -7048931 + RLTR20B2 LTR ERVK 266 566 -11 6 1258 546 287 0 32 chr17 88223752 88223878 -7048773 - B1F2 SINE Alu -22 127 6 6 1258 242 247 0 163 chr17 88223897 88223989 -7048662 - ID4_ SINE ID -2 81 5 6 1258 333 68 0 0 chr17 88224084 88224128 -7048523 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1258 264 263 0 0 chr17 88224131 88224188 -7048463 - ID2 SINE ID -18 65 9 6 1258 429 81 0 0 chr17 88224225 88224287 -7048364 + (TA)n Simple_repeat Simple_repeat 2 63 0 6 1258 376 287 10 0 chr17 88224287 88224388 -7048263 - L1MB5 LINE L1 -519 5661 5560 6 1258 2044 131 116 55 chr17 88224548 88224945 -7047706 + MTC LTR MaLR 1 421 0 6 1258 1649 230 147 85 chr17 88224983 88225349 -7047302 + RMER17B LTR ERVK 1 399 -559 6 1258 661 12 23 0 chr17 88225349 88225435 -7047216 + (TC)n Simple_repeat Simple_repeat 2 89 0 6 1258 1649 225 157 95 chr17 88225435 88225852 -7046799 + RMER17B LTR ERVK 400 840 -118 6 1258 222 118 0 0 chr17 88226582 88226616 -7046035 + (TTCC)n Simple_repeat Simple_repeat 4 37 0 6 1258 180 111 0 0 chr17 88226941 88226968 -7045683 + (TA)n Simple_repeat Simple_repeat 2 28 0 6 1258 356 203 67 13 chr17 88226982 88227057 -7045594 - ID4_ SINE ID -3 80 2 6 1258 315 0 0 0 chr17 88227669 88227704 -7044947 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 1258 259 310 14 0 chr17 88227991 88228062 -7044589 + ID2 SINE ID 2 73 -10 6 1258 724 161 12 0 chr17 88228062 88228224 -7044427 + (CA)n Simple_repeat Simple_repeat 2 165 0 6 1258 721 156 12 24 chr17 88228241 88228577 -7044074 + (CA)n Simple_repeat Simple_repeat 1 331 0 6 1258 432 0 0 0 chr17 88229110 88229158 -7043493 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 1258 258 268 172 11 chr17 88229404 88229491 -7043160 + PB1 SINE Alu 27 127 0 6 1258 1690 107 84 0 chr17 88229550 88229811 -7042840 + MTC LTR MaLR 14 296 -125 6 1258 4308 160 49 15 chr17 88229811 88230542 -7042109 + RMER13A LTR ERVK 1 756 -104 6 1258 288 158 17 34 chr17 88230574 88230633 -7042018 + MTC LTR MaLR 356 413 -6 6 1258 1032 72 0 0 chr17 88230669 88230807 -7041844 + (CA)n Simple_repeat Simple_repeat 1 138 0 6 1258 403 325 16 8 chr17 88230807 88230928 -7041723 - RSINE1 SINE B4 -40 125 4 6 1258 333 278 123 14 chr17 88231091 88231237 -7041414 - L1M5 LINE L1 -1288 4858 4697 6 1258 512 285 14 28 chr17 88231373 88231514 -7041137 + B1F SINE Alu 10 148 -1 6 1258 465 66 0 0 chr17 88231637 88231698 -7040953 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 6 1258 662 292 7 0 chr17 88231707 88231861 -7040790 - RSINE1 SINE B4 -9 156 2 6 1258 310 250 39 20 chr17 88231863 88231965 -7040686 + L1M5 LINE L1 4562 4665 -1481 6 1258 200 336 53 27 chr17 88232179 88232329 -7040322 + L2 LINE L2 2738 2891 -528 6 1258 1660 163 66 31 chr17 88232365 88232597 -7040054 - RMER17C LTR ERVK -1 409 164 6 1258 180 0 0 0 chr17 88232597 88232617 -7040034 + (GGGTG)n Simple_repeat Simple_repeat 3 22 0 6 1258 1660 174 72 43 chr17 88232617 88232864 -7039787 - RMER17C LTR ERVK -576 382 16 6 1258 814 191 0 28 chr17 88232826 88232971 -7039680 + B1_Mus1 SINE Alu 8 148 0 6 1258 825 140 0 0 chr17 88232980 88233116 -7039535 + (GAA)n Simple_repeat Simple_repeat 1 136 0 6 1258 651 129 245 25 chr17 88233148 88233307 -7039344 + B2_Mm2 SINE B2 1 194 -1 6 1258 2095 159 95 30 chr17 88233744 88234216 -7038435 - RLTR28 LTR ERVL -21 503 1 6 1258 1843 140 229 0 chr17 88235175 88235525 -7037126 - RLTR23 LTR ERV1 0 430 1 6 1258 1284 89 0 0 chr17 88235588 88235768 -7036883 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 1258 1328 76 0 8 chr17 88235768 88235997 -7036654 + (TC)n Simple_repeat Simple_repeat 1 227 0 6 1258 192 135 0 0 chr17 88236544 88236581 -7036070 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1258 520 257 0 17 chr17 88236583 88236698 -7035953 - RSINE1 SINE B4 -1 164 52 6 1258 944 188 96 0 chr17 88236982 88237179 -7035472 - B3 SINE B2 0 216 1 6 1258 922 241 14 24 chr17 88237221 88237429 -7035222 - B3 SINE B2 0 216 11 6 1258 320 330 40 0 chr17 88237601 88237701 -7034950 - MLT1G1 LTR MaLR -71 508 405 6 1258 23 0 0 0 chr17 88238392 88238415 -7034236 + AT_rich Low_complexity Low_complexity 1 23 0 6 1258 887 188 192 6 chr17 88238429 88238611 -7034040 - B3 SINE B2 0 216 1 6 1258 393 39 0 0 chr17 88238767 88238818 -7033833 + (GGGA)n Simple_repeat Simple_repeat 1 51 0 6 1258 557 147 39 0 chr17 88238818 88238920 -7033731 + RLTR24 LTR ERV1 9 114 -415 6 1258 4640 146 73 38 chr17 88238922 88239789 -7032862 + RMER13B LTR ERVK 12 908 0 6 1258 1636 184 41 38 chr17 88239790 88240031 -7032620 + RLTR24 LTR ERV1 190 424 -105 6 1258 348 24 0 0 chr17 88240031 88240072 -7032579 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1258 1636 184 41 38 chr17 88240072 88240169 -7032482 + RLTR24 LTR ERV1 425 529 0 6 1258 411 277 56 14 chr17 88240570 88240713 -7031938 - MER5A DNA MER1_type -40 149 1 6 1258 1850 218 35 43 chr17 88240761 88241183 -7031468 + MTD LTR MaLR 1 419 0 6 1258 228 175 50 0 chr17 88241827 88241867 -7030784 + ORR1C2 LTR MaLR 1 42 -342 6 1258 2458 108 27 122 chr17 88242078 88242553 -7030098 - RLTR23 LTR ERV1 0 430 1 6 1258 205 309 102 10 chr17 88242949 88243047 -7029604 + L2 LINE L2 1088 1194 -2225 6 1258 861 190 0 0 chr17 88243786 88244258 -7028393 + (CCTG)n Simple_repeat Simple_repeat 1 472 0 6 1258 411 279 6 49 chr17 88244635 88244912 -7027739 + C-rich Low_complexity Low_complexity 1 264 0 6 1258 365 220 5 65 chr17 88244866 88245003 -7027648 + CT-rich Low_complexity Low_complexity 49 178 0 6 1258 3587 74 17 62 chr17 88245003 88245519 -7027132 - MT2_Mm LTR ERVL 0 493 1 6 1258 391 251 0 49 chr17 88245519 88245718 -7026933 + C-rich Low_complexity Low_complexity 1 189 0 6 1258 284 271 11 48 chr17 88245629 88245815 -7026836 + CT-rich Low_complexity Low_complexity 1 179 0 6 1258 400 226 0 49 chr17 88245787 88246100 -7026551 + C-rich Low_complexity Low_complexity 1 297 0 6 1258 689 315 107 41 chr17 88246362 88246756 -7025895 + MLT1C LTR MaLR 21 440 -27 6 1258 416 264 51 42 chr17 88246860 88247088 -7025563 + ORR1D1 LTR MaLR 41 277 -93 6 1258 1160 82 0 7 chr17 88247197 88247345 -7025306 + B1_Mus1 SINE Alu 2 148 0 6 1258 702 258 31 67 chr17 88247610 88247921 -7024730 + B4A SINE B4 1 270 -22 6 1258 212 129 0 0 chr17 88248356 88248387 -7024264 + ID4 SINE ID 12 42 -41 6 1258 425 260 19 0 chr17 88248433 88248537 -7024114 + PB1D10 SINE Alu 5 110 -7 6 1258 260 247 137 0 chr17 88248546 88248619 -7024032 + BC1_Mm scRNA scRNA 8 90 -62 6 1258 335 23 0 22 chr17 88248642 88248687 -7023964 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 6 1258 724 189 163 26 chr17 88249000 88249190 -7023461 - B3 SINE B2 0 216 1 6 1258 191 32 0 61 chr17 88249706 88249739 -7022912 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 6 1258 384 166 59 69 chr17 88249757 88249869 -7022782 + PB1D7 SINE Alu 2 119 -1 6 1258 297 262 19 37 chr17 88251719 88251826 -7020825 + RMER21B LTR ERV1 77 181 -661 6 1258 706 301 100 17 chr17 88251829 88252069 -7020582 + RMER21B LTR ERV1 306 565 -277 6 1258 219 146 0 0 chr17 88252223 88252264 -7020387 + (T)n Simple_repeat Simple_repeat 1 41 0 6 1258 1254 48 0 0 chr17 88252299 88252446 -7020205 - B1_Mus2 SINE Alu 0 147 1 6 1258 765 266 136 116 chr17 88252584 88253136 -7019515 + Lx7 LINE L1 6238 6800 -896 6 1258 1812 111 39 172 chr17 88253136 88253280 -7019371 + ORR1A1 LTR MaLR 1 111 -235 6 1258 1196 68 7 0 chr17 88253280 88253426 -7019225 + B1_Mus2 SINE Alu 1 147 0 6 1258 1812 111 39 172 chr17 88253426 88253671 -7018980 + ORR1A1 LTR MaLR 112 338 -8 6 1258 1194 315 54 13 chr17 88253703 88254169 -7018482 + Lx7 LINE L1 6841 7325 -371 6 1258 825 40 0 0 chr17 88254172 88254273 -7018378 + (TTTCC)n Simple_repeat Simple_repeat 5 105 0 6 1258 2870 25 0 0 chr17 88254273 88254594 -7018057 + RLTRETN_Mm LTR ERVK 2 322 0 6 1258 40503 20 1 8 chr17 88254594 88256079 -7016572 + MMETn-int LTR ERVK 1 1480 -3364 6 1258 1653 36 0 0 chr17 88256079 88256271 -7016380 + B2_Mm1a SINE B2 2 193 0 6 1258 40503 20 1 8 chr17 88256271 88259665 -7012986 + MMETn-int LTR ERVK 1481 4844 0 6 1258 2914 19 0 0 chr17 88259665 88259987 -7012664 + RLTRETN_Mm LTR ERVK 1 322 0 6 1258 1064 126 0 6 chr17 88259987 88260162 -7012489 + (TTTCC)n Simple_repeat Simple_repeat 4 177 0 6 1258 432 0 0 0 chr17 88260186 88260234 -7012417 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 1258 24 32 0 0 chr17 88260330 88260361 -7012290 + AT_rich Low_complexity Low_complexity 1 31 0 6 1258 216 0 0 0 chr17 88261404 88261428 -7011223 + (TCCC)n Simple_repeat Simple_repeat 3 26 0 6 1258 665 12 0 12 chr17 88261426 88261509 -7011142 + (TTTC)n Simple_repeat Simple_repeat 1 82 0 6 1258 1120 100 0 22 chr17 88261510 88261694 -7010957 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 7 1258 330 26 0 0 chr17 88261997 88262036 -7010615 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1258 522 43 0 0 chr17 88262036 88262104 -7010547 + (GA)n Simple_repeat Simple_repeat 2 70 0 7 1258 2006 217 20 34 chr17 88262106 88262550 -7010101 - RLTR20B3 LTR ERVK -121 456 19 7 1258 1026 52 97 0 chr17 88263063 88263197 -7009454 + B1_Mm SINE Alu 1 147 0 7 1258 240 35 0 0 chr17 88264158 88264187 -7008464 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 1258 1295 144 0 76 chr17 88264225 88264450 -7008201 + B3 SINE B2 1 208 -8 7 1258 307 245 128 58 chr17 88264522 88264678 -7007973 - MER5A DNA MER1_type -18 171 5 7 1258 330 132 0 0 chr17 88265267 88265320 -7007331 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 1258 190 339 96 20 chr17 88265896 88266095 -7006556 + L3 LINE CR1 4044 4257 -232 7 1258 1128 335 50 29 chr17 88266142 88266688 -7005963 + L2 LINE L2 2265 2817 -602 7 1258 324 0 0 0 chr17 88266688 88266724 -7005927 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 1258 306 0 0 0 chr17 88266724 88266757 -7005894 + (GA)n Simple_repeat Simple_repeat 2 35 0 7 1258 1128 335 50 29 chr17 88266757 88266870 -7005781 + L2 LINE L2 2818 2937 -482 7 1258 1179 124 21 5 chr17 88267334 88267521 -7005130 + B2_Mm2 SINE B2 3 192 -3 7 1258 261 259 0 0 chr17 88267533 88267587 -7005064 + ID4_ SINE ID 20 73 -10 7 1258 372 119 0 0 chr17 88267645 88267704 -7004947 + (CAT)n Simple_repeat Simple_repeat 1 59 0 7 1258 364 336 48 27 chr17 88267730 88267877 -7004774 - RSINE1 SINE B4 0 165 16 7 1258 854 243 51 56 chr17 88267904 88267957 -7004694 - B3 SINE B2 -3 213 172 7 1258 1948 196 66 48 chr17 88267957 88268472 -7004179 - RLTR11A LTR ERVK -4 524 1 7 1258 854 243 51 56 chr17 88268472 88268632 -7004019 - B3 SINE B2 -45 171 1 7 1258 1083 68 0 40 chr17 88268690 88268842 -7003809 - B1_Mm SINE Alu -1 146 1 7 1258 3223 31 39 0 chr17 88268922 88269303 -7003348 + MTA_Mm LTR MaLR 1 396 0 7 1258 404 309 48 90 chr17 88269382 88269692 -7002959 - Kanga1 DNA Tc2 -3 1742 1446 7 1258 475 312 20 20 chr17 88270163 88270310 -7002341 - MER117 DNA MER1_type -34 163 17 7 1258 216 51 32 63 chr17 88270648 88270711 -7001940 + (TATAA)n Simple_repeat Simple_repeat 1 61 0 7 1258 823 264 23 35 chr17 88270890 88271149 -7001502 - B4A SINE B4 -36 256 1 7 1258 634 300 99 40 chr17 88271150 88271492 -7001159 - MLT1B LTR MaLR -40 350 5 7 1258 293 238 96 48 chr17 88272003 88272198 -7000453 + ORSL-2a DNA Tip100 62 261 -81 7 1258 367 303 31 54 chr17 88272231 88272360 -7000291 + RSINE1 SINE B4 2 127 -38 7 1258 188 291 102 79 chr17 88272524 88272591 -7000060 + L2c LINE L2 3061 3134 -253 7 1258 325 0 0 43 chr17 88272591 88272638 -7000013 + (TAAAA)n Simple_repeat Simple_repeat 1 45 0 7 1258 188 291 102 79 chr17 88272638 88272697 -6999954 + L2c LINE L2 3135 3190 -197 7 1258 218 217 0 21 chr17 88272736 88272783 -6999868 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 1258 193 192 55 0 chr17 88272787 88272860 -6999791 + (CATG)n Simple_repeat Simple_repeat 2 78 0 7 1258 711 192 9 169 chr17 88272897 88273110 -6999541 + RMER17B LTR ERVK 489 667 -291 7 1258 495 243 9 18 chr17 88273086 88273199 -6999452 + RMER17B LTR ERVK 847 958 0 7 1258 2315 110 3 21 chr17 88273461 88273794 -6998857 + ORR1A2 LTR MaLR 1 327 0 7 1258 489 229 25 33 chr17 88274491 88274613 -6998038 - B1F2 SINE Alu 0 149 29 7 1258 363 149 29 43 chr17 88274614 88274684 -6997967 + MLT1A0 LTR MaLR 25 93 -272 7 1258 256 274 0 0 chr17 88274982 88275044 -6997607 + GA-rich Low_complexity Low_complexity 2 63 0 7 1258 294 316 63 0 chr17 88275147 88275242 -6997409 - Tigger7 DNA MER2_type -2195 296 196 7 1258 336 174 0 140 chr17 88275277 88275377 -6997274 + Tigger7 DNA MER2_type 2212 2297 -194 7 1258 584 219 0 25 chr17 88276371 88276493 -6996158 - B1F SINE Alu -7 142 24 7 1258 344 198 222 8 chr17 88276494 88276611 -6996040 + Tigger7 DNA MER2_type 2341 2482 -9 7 1258 535 330 96 47 chr17 88277230 88277573 -6995078 - MLT1C LTR MaLR -107 360 1 7 1258 257 325 62 133 chr17 88277637 88277813 -6994838 - RMER10A LTR ERVL -118 324 161 7 1258 447 19 0 0 chr17 88277813 88277865 -6994786 + (GGGGA)n Simple_repeat Simple_repeat 5 56 0 7 1258 240 320 65 137 chr17 88277865 88278025 -6994626 - RMER10A LTR ERVL -282 160 12 7 1258 1103 122 64 0 chr17 88278188 88278360 -6994291 - URR1A DNA MER1_type 0 226 44 7 1258 292 296 12 0 chr17 88278596 88278677 -6993974 - ID2 SINE ID -1 82 1 7 1258 366 23 0 0 chr17 88279866 88279909 -6992742 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 1258 238 325 92 55 chr17 88280128 88280291 -6992360 - MLT1N2 LTR MaLR -51 511 343 7 1258 331 26 0 0 chr17 88280384 88280422 -6992229 + HAL1-3A_ME LINE L1 1975 2012 -846 7 1258 486 188 0 0 chr17 88280423 88280524 -6992127 + (TA)n Simple_repeat Simple_repeat 1 101 0 7 1258 2301 202 78 32 chr17 88280554 88280997 -6991654 + RLTR20B1 LTR ERVK 1 456 -107 7 1258 345 82 0 0 chr17 88280997 88281046 -6991605 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1258 2301 202 78 32 chr17 88281046 88281140 -6991511 + RLTR20B1 LTR ERVK 457 562 -1 7 1258 205 321 0 0 chr17 88281140 88281196 -6991455 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 1258 615 158 208 52 chr17 88281196 88281350 -6991301 - B3A SINE B2 -20 178 1 7 1258 822 94 133 0 chr17 88282195 88282323 -6990328 + B1_Mur4 SINE Alu 5 149 -1 7 1258 900 186 5 114 chr17 88282489 88282708 -6989943 + RLTR40 LTR ERVK 5 199 -618 7 1258 29012 93 12 21 chr17 88282712 88284919 -6987732 - L1_Mus3 LINE L1 0 6638 4482 7 1258 1181 82 0 0 chr17 88284919 88285066 -6987585 - B1_Mus1 SINE Alu -1 147 1 7 1258 29012 117 17 34 chr17 88285066 88285679 -6986972 - L1_Mus3 LINE L1 -1402 4481 3839 7 1258 243 0 0 0 chr17 88285679 88285706 -6986945 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1258 29012 117 17 34 chr17 88285706 88286661 -6985990 - L1_Mus3 LINE L1 -2045 3838 2918 7 1258 1253 48 0 0 chr17 88286661 88286807 -6985844 - B1_Mus1 SINE Alu -1 147 2 7 1258 29012 117 17 34 chr17 88286807 88288204 -6984447 - L1_Mus3 LINE L1 -2966 2917 1537 7 1258 843 207 97 129 chr17 88288204 88288608 -6984043 + RLTR9C LTR ERVK 1 391 -2 7 1258 29012 108 11 13 chr17 88288608 88289216 -6983435 - L1_Mus3 LINE L1 -4347 1536 951 7 1258 2115 236 44 36 chr17 88289216 88289736 -6982915 + RLTR40 LTR ERVK 290 813 -4 7 1258 662 159 8 0 chr17 88290051 88290177 -6982474 + GA-rich Low_complexity Low_complexity 3 129 0 7 1258 245 273 252 43 chr17 88290186 88290301 -6982350 - ORR1E LTR MaLR -175 184 46 7 1258 231 307 46 149 chr17 88290455 88290593 -6982058 + MLT1D LTR MaLR 22 134 -371 7 1258 5832 80 7 37 chr17 88290593 88291147 -6981504 - RLTR13C2 LTR ERVK 0 808 265 7 1258 2318 87 126 6 chr17 88291147 88291495 -6981156 - RLTR10 LTR ERVK 0 390 1 7 1258 5832 80 7 37 chr17 88291495 88291773 -6980878 - RLTR13C2 LTR ERVK -544 264 1 7 1258 323 269 108 47 chr17 88291825 88291973 -6980678 + MLT1D LTR MaLR 297 453 -52 7 1258 393 171 110 209 chr17 88291975 88292031 -6980620 - B1_Mur2 SINE Alu -1 148 87 7 1258 4264 97 14 27 chr17 88292031 88292667 -6979984 - RLTR5_Mm LTR ERV1 0 628 1 7 1258 393 171 110 209 chr17 88292667 88292773 -6979878 - B1_Mur2 SINE Alu -63 86 3 7 1258 345 47 0 0 chr17 88292974 88293017 -6979634 + (TCC)n Simple_repeat Simple_repeat 2 44 0 7 1258 274 314 11 11 chr17 88293020 88293107 -6979544 - PB1D7 SINE Alu -33 87 1 7 1258 780 260 10 20 chr17 88293240 88293440 -6979211 - B3A SINE B2 0 198 1 7 1258 342 147 0 0 chr17 88293622 88293690 -6978961 + (TG)n Simple_repeat Simple_repeat 1 68 0 7 1258 935 308 178 62 chr17 88293715 88294094 -6978557 + RMER13A LTR ERVK 14 420 -440 7 1258 243 0 0 0 chr17 88294094 88294121 -6978530 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 1258 261 0 0 0 chr17 88294121 88294149 -6978502 + (GA)n Simple_repeat Simple_repeat 1 29 0 7 1258 935 308 178 62 chr17 88294149 88294491 -6978160 + RMER13A LTR ERVK 421 819 -41 7 1258 567 221 4 0 chr17 88294548 88294826 -6977825 + (TG)n Simple_repeat Simple_repeat 1 279 0 7 1258 463 206 0 85 chr17 88294875 88294981 -6977670 + PB1D10 SINE Alu 13 109 -8 7 1258 4256 51 2 4 chr17 88295393 88295906 -6976745 - RLTR1B LTR ERV1 0 512 1 7 1258 345 309 122 81 chr17 88295927 88296149 -6976502 - ORR1D2 LTR MaLR -123 236 6 7 1258 809 123 85 0 chr17 88297163 88297293 -6975358 + B1_Mur4 SINE Alu 10 150 0 7 1258 3451 30 5 0 chr17 88297585 88297979 -6974672 - MTA_Mm LTR MaLR 0 396 1 7 1258 455 273 128 34 chr17 88298155 88298303 -6974348 + RSINE1 SINE B4 2 163 -2 7 1258 489 259 0 9 chr17 88298725 88298838 -6973813 + PB1D10 SINE Alu 4 115 -2 7 1258 300 328 100 74 chr17 88298900 88299170 -6973481 + MLT1J LTR MaLR 37 313 -131 7 1258 667 304 67 5 chr17 88299255 88299343 -6973308 - ID_B1 SINE B4 -2 222 131 7 1258 1043 243 183 41 chr17 88299343 88299785 -6972866 + RLTR16 LTR ERVK 1 505 0 7 1258 667 304 67 5 chr17 88299785 88299891 -6972760 - ID_B1 SINE B4 -94 130 16 7 1258 385 269 12 0 chr17 88299936 88300096 -6972555 + (CA)n Simple_repeat Simple_repeat 1 162 0 7 1258 217 253 23 0 chr17 88300109 88300196 -6972455 + (CA)n Simple_repeat Simple_repeat 1 89 0 7 1258 206 239 22 0 chr17 88300208 88300254 -6972397 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 1258 689 262 157 28 chr17 88300322 88300538 -6972113 - MTD LTR MaLR 0 419 176 7 1258 452 278 201 65 chr17 88300848 88301245 -6971406 + RMER5 LTR ERV1 16 466 -68 7 1258 1923 124 14 77 chr17 88301251 88301680 -6970971 - RMER17C LTR ERVK -8 402 1 7 1258 759 245 75 133 chr17 88301882 88302244 -6970407 + ORR1E LTR MaLR 4 344 -15 7 1258 955 228 58 0 chr17 88302298 88302487 -6970164 - B3 SINE B2 -13 203 4 7 1258 1346 74 29 0 chr17 88303346 88303521 -6969130 + B2_Mm1a SINE B2 1 180 -13 7 1258 351 0 0 0 chr17 88303521 88303560 -6969091 + (GA)n Simple_repeat Simple_repeat 2 40 0 7 1258 292 251 159 69 chr17 88303814 88303948 -6968703 + B1_Mur1 SINE Alu 7 149 0 7 1258 21 0 0 0 chr17 88303948 88303969 -6968682 + AT_rich Low_complexity Low_complexity 1 21 0 7 1258 1374 168 105 3 chr17 88303970 88304275 -6968376 + Lx9 LINE L1 7308 7643 -1 7 1258 3165 125 115 8 chr17 88304302 88304834 -6967817 + RLTR1D LTR ERV1 1 589 -16 7 1258 717 12 0 0 chr17 88305458 88305540 -6967111 + (TTTCC)n Simple_repeat Simple_repeat 3 84 0 7 1258 31398 109 17 14 chr17 88305562 88307889 -6964762 - Lx4A LINE L1 -39 7019 4651 7 1258 2710 124 30 51 chr17 88307889 88308381 -6964270 - RLTR45 LTR ERVK 0 482 1 7 1258 31398 95 17 22 chr17 88308381 88309981 -6962670 - Lx4A LINE L1 -1227 4650 3081 7 1258 1783 5 0 0 chr17 88309981 88310174 -6962477 - B2_Mm1a SINE B2 0 193 1 8 1258 31398 95 17 22 chr17 88310174 88310227 -6962424 - Lx4A LINE L1 -2797 3080 3029 7 1258 1282 104 22 0 chr17 88310227 88310410 -6962241 - B2_Mm2 SINE B2 -7 188 2 8 1258 31398 95 17 22 chr17 88310410 88311384 -6961267 - Lx4A LINE L1 -2849 3028 2061 7 1258 237 33 0 0 chr17 88311384 88311414 -6961237 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 1258 31398 107 72 17 chr17 88311414 88312831 -6959820 - Lx4A LINE L1 -3817 2060 529 7 1258 520 243 122 34 chr17 88312840 88313058 -6959593 + MER33 DNA MER1_type 29 234 -90 8 1258 1218 108 22 22 chr17 88313059 88313239 -6959412 + B2_Mm2 SINE B2 2 181 -14 8 1258 937 110 20 7 chr17 88313267 88313413 -6959238 + B2_Mm2 SINE B2 47 194 -1 8 1258 207 173 0 0 chr17 88313417 88313469 -6959182 + (CTA)n Simple_repeat Simple_repeat 1 52 0 8 1258 300 229 0 34 chr17 88313967 88314079 -6958572 - ID4 SINE ID -21 131 26 8 1258 711 85 132 0 chr17 88314106 88314212 -6958439 - B1_Mus1 SINE Alu -28 120 1 8 1258 456 230 25 58 chr17 88314280 88314400 -6958251 - PB1D7 SINE Alu -2 118 3 8 1258 217 295 0 90 chr17 88314340 88314407 -6958244 - B4 SINE B4 -151 141 81 8 1258 323 258 11 53 chr17 88314408 88314502 -6958149 - PB1D10 SINE Alu -2 115 26 8 1258 635 250 36 0 chr17 88314578 88314718 -6957933 + B3A SINE B2 1 145 -53 8 1258 187 342 8 57 chr17 88315460 88315584 -6957067 - L2c LINE L2 -246 3141 3024 8 1258 395 118 47 0 chr17 88316190 88316275 -6956376 + (GTCTG)n Simple_repeat Simple_repeat 4 92 0 8 1258 634 272 10 24 chr17 88316279 88316444 -6956207 - ID_B1 SINE B4 -8 216 57 8 1258 357 339 102 0 chr17 88316444 88316621 -6956030 + MIR SINE MIR 68 262 0 8 1258 627 202 48 75 chr17 88316650 88316837 -6955814 - RLTR23 LTR ERV1 -5 425 244 8 1258 194 308 187 28 chr17 88317178 88317285 -6955366 + MIR3 SINE MIR 2 125 -83 8 1258 421 196 41 52 chr17 88318119 88318216 -6954435 + PB1D9 SINE Alu 24 119 -1 8 1258 314 281 11 0 chr17 88318529 88318618 -6954033 - BC1_Mm scRNA scRNA -49 103 14 8 1258 613 214 21 11 chr17 88319535 88319662 -6952989 - B3 SINE B2 -41 154 35 8 1258 648 24 0 0 chr17 88319662 88319744 -6952907 - B1_Mus2 SINE Alu -65 82 1 8 1258 445 180 22 0 chr17 88319664 88319753 -6952898 - B4 SINE B4 -125 167 77 8 1258 785 167 7 0 chr17 88320767 88320917 -6951734 + GA-rich Low_complexity Low_complexity 2 152 0 8 1258 391 275 35 84 chr17 88320973 88321116 -6951535 - RMER15 LTR ERVL -5 570 435 8 1258 462 79 0 0 chr17 88321189 88321252 -6951399 + (TTA)n Simple_repeat Simple_repeat 1 63 0 8 1258 703 246 101 24 chr17 88321980 88322315 -6950336 - RMER15 LTR ERVL -132 443 49 8 1258 2811 138 98 46 chr17 88322324 88322864 -6949787 + RMER4B LTR ERVK 17 584 -1 8 1258 1031 58 65 0 chr17 88322959 88323097 -6949554 + B1_Mus2 SINE Alu 1 147 0 8 1258 261 118 0 0 chr17 88323100 88323151 -6949500 + (A)n Simple_repeat Simple_repeat 1 51 0 8 1258 364 287 17 25 chr17 88323507 88323625 -6949026 + L1MEb LINE L1 794 910 -5226 8 1258 245 320 112 0 chr17 88323785 88323910 -6948741 + L1MEb LINE L1 4972 5110 -1036 8 1258 273 29 0 0 chr17 88324003 88324037 -6948614 + (CA)n Simple_repeat Simple_repeat 2 35 0 8 1258 267 208 41 14 chr17 88324084 88324157 -6948494 + L1MEb LINE L1 5108 5182 -964 8 1258 367 223 21 21 chr17 88324180 88324271 -6948380 + ID_B1 SINE B4 127 218 -6 8 1258 195 0 86 0 chr17 88324271 88324306 -6948345 + (TAA)n Simple_repeat Simple_repeat 2 39 0 8 1258 259 224 12 73 chr17 88324390 88324472 -6948179 + Tigger7 DNA MER2_type 37 113 -2378 8 1258 258 232 105 0 chr17 88324476 88324540 -6948111 - ID4 SINE ID -62 90 21 8 1258 225 262 0 15 chr17 88324550 88324616 -6948035 - RLTR40 LTR ERVK -216 601 537 8 1258 1562 207 11 57 chr17 88324598 88324947 -6947704 - ORR1B1 LTR MaLR -4 390 58 8 1258 237 326 130 0 chr17 88324928 88325020 -6947631 - PB1D7 SINE Alu -15 105 2 8 1258 365 266 61 9 chr17 88325031 88325145 -6947506 - PB1 SINE Alu -7 120 1 8 1258 707 281 114 78 chr17 88325145 88325403 -6947248 + Tigger7 DNA MER2_type 100 369 -2122 8 1258 5081 151 28 19 chr17 88325403 88326255 -6946396 - RMER13A LTR ERVK 0 860 1 8 1258 707 281 114 78 chr17 88326255 88326355 -6946296 + Tigger7 DNA MER2_type 370 471 -2020 8 1258 229 206 0 29 chr17 88326367 88326437 -6946214 + Tigger7 DNA MER2_type 2346 2413 -78 8 1258 321 283 110 73 chr17 88326455 88326619 -6946032 + L1MC4a LINE L1 6603 6772 -1110 8 1258 774 284 57 0 chr17 88326620 88326796 -6945855 - B3 SINE B2 -3 213 28 8 1258 525 258 113 25 chr17 88326801 88327004 -6945647 + ORR1E LTR MaLR 137 357 -2 8 1258 230 313 68 39 chr17 88327864 88327967 -6944684 + Tigger15a DNA TcMar 578 683 -32 8 1258 941 170 21 21 chr17 88328048 88328234 -6944417 - B2_Mm2 SINE B2 -8 187 2 8 1258 686 284 24 29 chr17 88328238 88328445 -6944206 + MTD LTR MaLR 6 211 -208 8 1258 1316 236 111 32 chr17 88328539 88328881 -6943770 + MTE2b LTR MaLR 1 369 -10 8 1258 1035 277 36 97 chr17 88328990 88329284 -6943367 - MER89 LTR ERV1 -9 550 251 8 1258 451 298 124 32 chr17 88329284 88329534 -6943117 + B4A SINE B4 2 274 -18 8 1258 243 88 0 0 chr17 88329543 88329577 -6943074 + (CA)n Simple_repeat Simple_repeat 2 35 0 8 1258 1035 277 36 97 chr17 88329577 88329716 -6942935 - MER89 LTR ERV1 -312 247 134 8 1258 389 344 0 0 chr17 88329807 88329932 -6942719 - ID_B1 SINE B4 -8 216 92 8 1258 235 360 0 0 chr17 88329855 88329941 -6942710 - PB1D10 SINE Alu -30 87 2 8 1258 316 308 0 0 chr17 88330563 88330654 -6941997 + MIR SINE MIR 83 173 -89 8 1258 239 280 0 74 chr17 88330752 88330833 -6941818 + L2c LINE L2 3313 3387 0 8 1258 207 0 0 0 chr17 88330906 88330929 -6941722 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 1258 625 235 37 29 chr17 88331604 88331740 -6940911 - B1F SINE Alu -8 141 5 8 1258 286 296 20 10 chr17 88331923 88332022 -6940629 - PB1D10 SINE Alu -15 102 3 8 1258 1127 205 132 65 chr17 88332398 88332769 -6939882 + RMER10A LTR ERVL 42 437 -5 8 1258 2574 129 35 28 chr17 88333056 88333478 -6939173 + RLTR23 LTR ERV1 1 425 -5 8 1258 430 294 0 19 chr17 88333495 88333597 -6939054 - B3A SINE B2 -35 163 64 8 1258 2215 114 37 11 chr17 88333597 88333952 -6938699 - RLTR9A LTR ERVK 0 368 5 8 1258 281 118 216 0 chr17 88333960 88334011 -6938640 - B3 SINE B2 -148 68 7 8 1258 581 256 23 0 chr17 88334414 88334547 -6938104 + B3A SINE B2 5 140 -58 8 1258 282 236 24 87 chr17 88334874 88335000 -6937651 + B3 SINE B2 2 118 -77 8 1258 337 250 91 41 chr17 88334974 88335095 -6937556 - B2_Mm2 SINE B2 -68 127 1 8 1258 1262 271 148 19 chr17 88335265 88335799 -6936852 - L1ME1 LINE L1 -317 5862 5260 8 1258 295 293 0 124 chr17 88335907 88336012 -6936639 - B4A SINE B4 0 292 201 8 1258 305 99 56 14 chr17 88336012 88336084 -6936567 + CT-rich Low_complexity Low_complexity 2 76 0 8 1258 1073 58 72 0 chr17 88336114 88336252 -6936399 - B1_Mus1 SINE Alu 0 148 1 8 1258 963 117 18 0 chr17 88336253 88336424 -6936227 + (TTCC)n Simple_repeat Simple_repeat 4 177 0 8 1258 425 269 131 94 chr17 88336424 88336699 -6935952 - B4 SINE B4 -7 285 1 8 1258 298 273 17 76 chr17 88336784 88336890 -6935761 + LTR39 LTR ERV1 267 365 -418 8 1258 472 150 300 0 chr17 88336890 88336990 -6935661 + B3 SINE B2 1 130 -86 8 1258 432 0 0 0 chr17 88337034 88337082 -6935569 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 8 1258 385 314 10 10 chr17 88337126 88337229 -6935422 - ID_B1 SINE B4 -5 219 117 8 1258 675 117 0 0 chr17 88337254 88337357 -6935294 + (TTCC)n Simple_repeat Simple_repeat 3 105 0 8 1258 419 302 101 103 chr17 88337475 88337636 -6935015 - L1ME1 LINE L1 -1001 5145 5019 8 1258 429 212 12 0 chr17 88337636 88337716 -6934935 - ID4 SINE ID -2 81 1 8 1258 421 302 101 103 chr17 88337716 88338100 -6934551 - L1ME1 LINE L1 -1128 5018 4601 8 1258 377 257 138 0 chr17 88338316 88338425 -6934226 - B1F SINE Alu -8 141 18 8 1258 397 275 23 108 chr17 88338516 88338657 -6933994 + PB1D7 SINE Alu 1 129 -20 8 1258 4735 117 40 10 chr17 88338712 88339392 -6933259 + Lx4A LINE L1 6313 7013 -45 8 1258 522 0 0 0 chr17 88339392 88339450 -6933201 + (GA)n Simple_repeat Simple_repeat 1 58 0 8 1258 4735 117 40 10 chr17 88339450 88339493 -6933158 + Lx4A LINE L1 7014 7057 -1 8 1258 677 192 0 46 chr17 88339793 88339924 -6932727 - RMER10A LTR ERVL -317 125 1 8 1258 230 341 103 24 chr17 88340131 88340257 -6932394 + MIR SINE MIR 44 179 -83 8 1258 346 254 0 40 chr17 88340298 88340382 -6932269 + ID2 SINE ID 11 91 -61 8 1258 26 0 0 0 chr17 88340905 88340931 -6931720 + AT_rich Low_complexity Low_complexity 1 26 0 8 1258 300 262 50 0 chr17 88341380 88341460 -6931191 + L1M5 LINE L1 3114 3197 -2949 8 1258 268 287 8 135 chr17 88341535 88341584 -6931067 + MT2B LTR ERVL 125 156 -445 8 1258 480 194 19 11 chr17 88341584 88341690 -6930961 + B1_Mus1 SINE Alu 1 112 -8 8 1258 308 331 79 46 chr17 88341690 88341735 -6930916 + B4A SINE B4 86 241 -51 8 1258 842 213 184 14 chr17 88341735 88342062 -6930589 + MTE2b LTR MaLR 1 379 0 8 1259 1010 112 19 231 chr17 88342991 88343095 -6929556 - ORR1B2 LTR MaLR 0 367 274 8 1259 1124 83 0 7 chr17 88343095 88343241 -6929410 + B1_Mus2 SINE Alu 1 145 -2 8 1259 1010 112 19 231 chr17 88343241 88343386 -6929265 - ORR1B2 LTR MaLR -94 273 174 8 1259 4545 54 7 12 chr17 88343386 88343953 -6928698 - LTRIS2 LTR ERV1 0 564 1 8 1259 1010 112 19 231 chr17 88343953 88343970 -6928681 - ORR1B2 LTR MaLR -194 173 157 8 1259 469 118 13 38 chr17 88344489 88344568 -6928083 - ORR1B2 LTR MaLR -317 77 1 8 1259 198 0 0 0 chr17 88345376 88345398 -6927253 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 8 1259 1490 153 52 195 chr17 88345715 88345779 -6926872 - ORR1C2 LTR MaLR -2 382 339 8 1259 1132 63 28 0 chr17 88345779 88345921 -6926730 - B1_Mus2 SINE Alu 0 147 2 8 1259 1413 94 16 0 chr17 88345922 88346114 -6926537 - B2_Mm2 SINE B2 0 195 1 8 1259 1490 153 52 195 chr17 88346114 88346493 -6926158 - ORR1C2 LTR MaLR -46 338 1 8 1259 563 246 14 48 chr17 88346988 88347005 -6925646 - B1_Mus2 SINE Alu -1 146 133 8 1259 387 0 0 0 chr17 88347005 88347048 -6925603 + (TC)n Simple_repeat Simple_repeat 2 44 0 8 1259 652 240 16 8 chr17 88347048 88347175 -6925476 - B1_Mur1 SINE Alu -16 133 7 8 1259 323 125 67 67 chr17 88347278 88347338 -6925313 - RSINE1 SINE B4 -33 132 73 9 1259 353 242 0 0 chr17 88347420 88347486 -6925165 - B1_Mur1 SINE Alu -24 125 60 9 1259 794 228 0 20 chr17 88348060 88348212 -6924439 + B1_Mur1 SINE Alu 1 149 0 9 1259 977 87 33 7 chr17 88348714 88348865 -6923786 + L1_Mus4 LINE L1 6455 6609 -27 9 1259 1220 41 0 7 chr17 88348865 88349013 -6923638 + B1_Mus1 SINE Alu 1 147 -1 9 1259 271 0 25 25 chr17 88349860 88349900 -6922751 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 9 1259 375 347 32 74 chr17 88350578 88350768 -6921883 - B3A SINE B2 -2 196 15 9 1259 520 248 6 76 chr17 88350768 88350925 -6921726 - B3 SINE B2 -49 146 1 9 1259 2120 198 22 5 chr17 88351172 88351578 -6921073 + MTC LTR MaLR 1 413 -8 9 1259 3368 60 33 104 chr17 88353890 88354409 -6918242 - RLTR45 LTR ERVK 0 482 1 9 1259 228 167 69 50 chr17 88355062 88355163 -6917488 + (CCTA)n Simple_repeat Simple_repeat 4 106 0 9 1259 495 0 0 0 chr17 88355566 88355621 -6917030 + (CA)n Simple_repeat Simple_repeat 1 55 0 9 1259 302 277 112 35 chr17 88356094 88356210 -6916441 + MLT1A1 LTR MaLR 6 130 -278 9 1259 365 219 14 14 chr17 88356292 88356366 -6916285 + PB1 SINE Alu 47 120 -7 9 1259 955 82 240 0 chr17 88356378 88356524 -6916127 + B2_Mm2 SINE B2 1 181 -14 9 1259 1075 313 81 15 chr17 88356551 88356957 -6915694 - MTE-int LTR MaLR -1104 476 44 9 1259 808 195 0 20 chr17 88356957 88357109 -6915542 + B1_Mur2 SINE Alu 1 149 0 9 1259 288 239 30 71 chr17 88357145 88357244 -6915407 - ORR1E LTR MaLR -16 363 269 9 1259 1529 240 99 16 chr17 88357248 88357633 -6915018 + MTD LTR MaLR 1 417 -2 9 1259 628 284 51 32 chr17 88357638 88357876 -6914775 - ORR1E LTR MaLR -115 255 16 9 1259 238 266 16 0 chr17 88357879 88357943 -6914708 - PB1 SINE Alu -40 87 23 9 1259 368 303 30 119 chr17 88358148 88358281 -6914370 - MIR SINE MIR -3 259 136 9 1259 258 206 90 60 chr17 88358281 88358348 -6914303 - tRNA-Ala-GCY_ tRNA tRNA -4 71 3 9 1259 368 303 30 119 chr17 88358348 88358416 -6914235 - MIR SINE MIR -127 135 76 9 1259 290 200 89 56 chr17 88358419 88358509 -6914142 - MLT2C1 LTR ERVL -4 559 467 9 1259 233 209 0 0 chr17 88358518 88358561 -6914090 + RLTR13D3 LTR ERVK 1 43 -1071 9 1259 354 107 0 0 chr17 88358665 88358721 -6913930 + (T)n Simple_repeat Simple_repeat 1 56 0 9 1259 1248 41 0 0 chr17 88358721 88358868 -6913783 - B1_Mus2 SINE Alu 0 147 1 9 1259 1702 31 0 0 chr17 88359057 88359250 -6913401 + B2_Mm1a SINE B2 1 193 0 9 1259 26 0 0 0 chr17 88359250 88359276 -6913375 + AT_rich Low_complexity Low_complexity 1 26 0 9 1259 270 103 0 0 chr17 88359419 88359458 -6913193 + B2_Mm2 SINE B2 1 39 -156 9 1259 363 240 64 158 chr17 88359617 88359879 -6912772 + RLTR13D3 LTR ERVK 785 1114 0 9 1259 378 209 106 146 chr17 88360602 88360753 -6911898 - B1_Mur1 SINE Alu -1 148 4 9 1259 430 316 121 48 chr17 88360803 88361009 -6911642 - ID_B1 SINE B4 -1 223 3 9 1259 256 267 0 51 chr17 88361071 88361150 -6911501 - RLTR25A LTR ERVK -507 596 522 9 1259 622 154 19 0 chr17 88361081 88361185 -6911466 - B1_Mur1 SINE Alu -35 114 9 9 1259 356 274 83 25 chr17 88361185 88361201 -6911450 - ID_B1 SINE B4 -32 192 66 9 1259 194 62 0 30 chr17 88361241 88361274 -6911377 + (TG)n Simple_repeat Simple_repeat 2 33 0 9 1259 2279 197 78 7 chr17 88361282 88361874 -6910777 + MYSERV16_I-int LTR ERVK 1692 2325 -1 9 1259 2405 94 125 5 chr17 88361875 88362251 -6910400 + BGLII LTR ERVK 1 421 0 9 1259 1002 90 76 0 chr17 88362251 88362396 -6910255 - B2_Mm2 SINE B2 -39 156 1 9 1259 661 215 220 63 chr17 88362637 88362758 -6909893 + RLTR9A LTR ERVK 1 127 -241 9 1259 192 40 0 0 chr17 88362758 88362783 -6909868 + (G)n Simple_repeat Simple_repeat 1 25 0 9 1259 661 215 220 63 chr17 88362783 88362979 -6909672 + RLTR9A LTR ERVK 128 367 -1 9 1259 255 157 0 0 chr17 88362998 88363049 -6909602 + T-rich Low_complexity Low_complexity 1 51 0 9 1259 1050 72 58 0 chr17 88363057 88363196 -6909455 - B1_Mm SINE Alu 0 147 1 9 1259 432 204 11 11 chr17 88363247 88363336 -6909315 + Lx6 LINE L1 6939 7027 -669 9 1259 1324 139 13 48 chr17 88363346 88363573 -6909078 + URR1A DNA MER1_type 8 226 0 9 1259 814 227 6 26 chr17 88363573 88363781 -6908870 + Lx6 LINE L1 7028 7221 -239 9 1259 1053 45 15 0 chr17 88363792 88363925 -6908726 - B1_Mus1 SINE Alu 0 148 14 9 1259 443 245 71 112 chr17 88363825 88363995 -6908656 - MT2B LTR ERVL -337 264 102 9 1259 299 234 0 47 chr17 88363995 88364080 -6908571 + Lx6 LINE L1 7570 7650 -46 9 1259 426 182 139 20 chr17 88364102 88364203 -6908448 + ID_B1 SINE B4 93 205 -19 9 1259 31 0 0 0 chr17 88364315 88364346 -6908305 + AT_rich Low_complexity Low_complexity 1 31 0 9 1259 2908 47 171 117 chr17 88364409 88364895 -6907756 + RLTR1B LTR ERV1 1 512 0 9 1259 1019 235 0 174 chr17 88365027 88365153 -6907498 - L1_Mur3 LINE L1 -449 5428 5317 9 1259 1226 35 0 0 chr17 88365153 88365295 -6907356 + B1_Mus1 SINE Alu 1 142 -6 9 1259 300 27 0 0 chr17 88365297 88365334 -6907317 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 9 1259 1171 182 0 43 chr17 88365334 88365596 -6907055 - L1_Mur3 LINE L1 -561 5316 5105 9 1259 679 194 26 78 chr17 88365596 88365803 -6906848 - B3 SINE B2 -3 192 2 9 1259 2454 171 23 43 chr17 88365803 88366315 -6906336 - L1_Mur3 LINE L1 -767 5113 4612 9 1259 890 196 48 34 chr17 88366315 88366346 -6906305 - RMER6C LTR ERVK -2 688 663 9 1259 5133 36 2 0 chr17 88366346 88366932 -6905719 - LTRIS_Mus LTR ERV1 0 587 1 9 1259 1396 182 43 35 chr17 88366932 88367112 -6905539 - RMER6C LTR ERVK -419 271 233 9 1259 342 0 0 0 chr17 88367112 88367150 -6905501 + (TC)n Simple_repeat Simple_repeat 2 39 0 9 1259 1396 140 25 40 chr17 88367150 88367378 -6905273 - RMER6C LTR ERVK -458 232 1 9 1259 866 146 14 0 chr17 88367378 88367522 -6905129 - L1_Mur3 LINE L1 -1274 4606 4461 9 1259 225 94 0 0 chr17 88367528 88367560 -6905091 + (TCC)n Simple_repeat Simple_repeat 2 33 0 9 1259 23 33 0 0 chr17 88367598 88367628 -6905023 + AT_rich Low_complexity Low_complexity 1 30 0 9 1259 500 186 197 24 chr17 88367666 88367793 -6904858 - B1_Mur2 SINE Alu 0 149 1 9 1259 286 247 36 72 chr17 88368554 88368637 -6904014 - B1F SINE Alu -6 143 64 9 1259 1560 186 98 52 chr17 88368677 88369084 -6903567 + RMER4A LTR ERVK 9 434 -32 9 1259 1322 128 11 10 chr17 88369221 88369434 -6903217 + RLTR33 LTR ERVK 1 347 -149 9 1259 1221 90 0 6 chr17 88369436 88369595 -6903056 + B2_Mm2 SINE B2 1 159 -36 9 1259 351 0 0 0 chr17 88369595 88369634 -6903017 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 9 1259 2464 175 112 5 chr17 88369642 88370081 -6902570 + RLTR33 LTR ERVK 184 678 0 9 1259 389 206 9 0 chr17 88370111 88370218 -6902433 + (TG)n Simple_repeat Simple_repeat 2 109 0 9 1259 2011 172 160 30 chr17 88370241 88370709 -6901942 + RLTR24 LTR ERV1 1 529 0 9 1259 257 261 11 64 chr17 88371229 88371253 -6901398 + PB1D7 SINE Alu 31 54 -66 9 1259 3129 84 11 125 chr17 88371253 88371797 -6900854 + RLTR45 LTR ERVK 1 482 0 9 1259 257 261 11 64 chr17 88371797 88371866 -6900785 + PB1D7 SINE Alu 55 119 -1 9 1259 210 37 0 0 chr17 88371994 88372021 -6900630 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 9 1259 1180 50 0 0 chr17 88372024 88372165 -6900486 - B1_Mus1 SINE Alu -6 142 2 9 1259 23 0 0 0 chr17 88372174 88372197 -6900454 + AT_rich Low_complexity Low_complexity 1 23 0 9 1259 356 230 13 13 chr17 88372198 88372273 -6900378 - B1_Mur1 SINE Alu -2 147 73 9 1259 305 243 99 14 chr17 88372686 88372757 -6899894 - B1_Mur3 SINE Alu -72 77 1 9 1259 381 219 76 127 chr17 88372778 88372789 -6899862 - RSINE1 SINE B4 0 165 155 9 1259 276 100 0 0 chr17 88372789 88372829 -6899822 + (CA)n Simple_repeat Simple_repeat 2 41 0 9 1259 381 219 76 127 chr17 88372829 88372974 -6899677 - RSINE1 SINE B4 -11 154 17 9 1259 203 171 0 0 chr17 88373094 88373135 -6899516 + T-rich Low_complexity Low_complexity 2 42 0 9 1259 506 237 56 35 chr17 88373136 88373280 -6899371 - B1_Mus2 SINE Alu 0 147 1 9 1259 432 143 138 32 chr17 88375330 88375424 -6897227 - PB1D9 SINE Alu 0 120 17 9 1259 841 188 60 11 chr17 88375604 88375787 -6896864 - B3 SINE B2 -24 192 1 9 1259 427 259 116 0 chr17 88375819 88375931 -6896720 - RSINE1 SINE B4 -1 164 40 9 1259 597 118 273 0 chr17 88375961 88376071 -6896580 - B1_Mus2 SINE Alu -5 142 3 9 1259 615 14 0 0 chr17 88376089 88376161 -6896490 + (TTTC)n Simple_repeat Simple_repeat 1 72 0 9 1259 1284 75 6 6 chr17 88376161 88376323 -6896328 - B2_Mm2 SINE B2 -32 163 2 9 1259 252 86 0 0 chr17 88376503 88376538 -6896113 + (T)n Simple_repeat Simple_repeat 1 35 0 9 1259 992 105 14 14 chr17 88376542 88376687 -6895964 - B1_Mus2 SINE Alu -2 145 1 9 1259 341 311 43 78 chr17 88376689 88376759 -6895892 - PB1D9 SINE Alu 0 120 54 9 1259 955 114 106 22 chr17 88376759 88376938 -6895713 - B2_Mm2 SINE B2 0 195 2 9 1259 341 311 43 78 chr17 88376938 88376982 -6895669 - PB1D9 SINE Alu -67 53 10 9 1259 471 263 270 40 chr17 88376991 88377213 -6895438 + B4 SINE B4 2 274 -18 9 1259 271 298 94 24 chr17 88377284 88377411 -6895240 + RSINE1 SINE B4 2 137 -28 9 1259 327 316 92 83 chr17 88377626 88377843 -6894808 + B4A SINE B4 6 224 -68 9 1259 615 123 138 8 chr17 88377721 88377844 -6894807 + B1_Mur4 SINE Alu 11 149 -1 9 1259 3251 46 8 0 chr17 88378825 88379217 -6893434 + MTA_Mm LTR MaLR 1 395 -1 9 1259 24 0 0 0 chr17 88380056 88380080 -6892571 + AT_rich Low_complexity Low_complexity 1 24 0 9 1259 518 197 31 86 chr17 88380855 88380983 -6891668 - B1_Mur2 SINE Alu -14 135 15 9 1259 397 241 75 48 chr17 88380994 88381136 -6891515 - B1F SINE Alu -7 140 12 9 1259 1102 81 34 0 chr17 88381671 88381820 -6890831 + B2_Mm2 SINE B2 1 154 -41 9 1259 423 0 0 0 chr17 88381820 88381867 -6890784 + (TAA)n Simple_repeat Simple_repeat 2 48 0 9 1259 757 142 0 0 chr17 88381887 88381993 -6890658 - B2_Mm2 SINE B2 -89 106 1 9 1259 537 279 88 5 chr17 88382270 88382475 -6890176 - ID_B1 SINE B4 0 224 3 9 1259 235 333 0 0 chr17 88383212 88383263 -6889388 - ID4 SINE ID -13 70 20 9 1259 361 333 56 92 chr17 88383288 88383388 -6889263 - ID_B1 SINE B4 -34 190 85 9 1259 188 35 35 0 chr17 88383388 88383417 -6889234 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1 1259 1118 65 0 0 chr17 88383417 88383555 -6889096 - B1_Mus2 SINE Alu -8 139 2 1 1259 361 333 56 92 chr17 88383555 88383595 -6889056 - ID SINE ID -140 84 55 9 1259 219 272 226 15 chr17 88383587 88383686 -6888965 - PB1D7 SINE Alu -32 117 3 1 1259 454 292 32 24 chr17 88386531 88386654 -6885997 - B1F1 SINE Alu -25 124 1 1 1259 477 277 11 122 chr17 88386654 88386751 -6885900 - ID SINE ID -147 77 2 1 1259 466 224 16 49 chr17 88389120 88389242 -6883409 - B1_Mus1 SINE Alu 0 148 31 1 1259 267 286 22 125 chr17 88391815 88391951 -6880700 + ID_B1 SINE B4 80 201 -23 1 1259 554 221 15 73 chr17 88391835 88391972 -6880679 + B1_Mur3 SINE Alu 11 139 -10 1 1259 841 204 54 18 chr17 88393525 88393717 -6878934 + B3 SINE B2 1 198 0 1 1259 529 280 69 32 chr17 88393882 88394040 -6878611 - B3 SINE B2 -36 180 23 1 1259 21 0 0 0 chr17 88394499 88394520 -6878131 + AT_rich Low_complexity Low_complexity 1 21 0 1 1259 248 314 47 0 chr17 88394660 88394746 -6877905 - B1F SINE Alu -51 98 9 1 1259 299 301 112 49 chr17 88395783 88395926 -6876725 + RSINE1 SINE B4 14 165 0 1 1259 316 228 163 0 chr17 88396139 88396231 -6876420 + PB1D9 SINE Alu 14 120 0 1 1259 267 292 10 82 chr17 88396300 88396397 -6876254 + B1_Mur2 SINE Alu 8 97 -52 1 1259 289 233 0 16 chr17 88397216 88397277 -6875374 - RSINE1 SINE B4 -104 61 2 1 1259 220 296 14 14 chr17 88397295 88397367 -6875284 - B1_Mur1 SINE Alu -10 139 68 1 1259 369 256 32 32 chr17 88397930 88398023 -6874628 + RSINE1 SINE B4 34 126 -39 1 1259 419 281 116 30 chr17 88398621 88398819 -6873832 - ID_B1 SINE B4 -6 218 4 1 1259 290 186 395 0 chr17 88399538 88399624 -6873027 - B3 SINE B2 -95 121 2 1 1259 216 0 0 0 chr17 88400032 88400056 -6872595 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1259 285 146 0 0 chr17 88400295 88400343 -6872308 + (T)n Simple_repeat Simple_repeat 1 48 0 1 1259 1136 68 0 26 chr17 88400343 88400494 -6872157 - B1_Mm SINE Alu 0 147 1 1 1259 402 322 3 0 chr17 88400720 88400838 -6871813 - B1F2 SINE Alu 0 120 1 1 1259 469 202 12 0 chr17 88400964 88401048 -6871603 + PB1D9 SINE Alu 1 85 -35 1 1259 206 128 26 0 chr17 88401189 88401228 -6871423 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1259 345 100 0 0 chr17 88401319 88401369 -6871282 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1259 334 157 9 38 chr17 88401438 88401544 -6871107 + (TG)n Simple_repeat Simple_repeat 2 104 0 1 1259 405 39 0 0 chr17 88401639 88401690 -6870961 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 1259 201 147 0 0 chr17 88401717 88401751 -6870900 + (TATATG)n Simple_repeat Simple_repeat 5 38 0 1 1259 743 167 230 22 chr17 88401805 88401983 -6870668 - B3 SINE B2 -1 215 1 1 1259 216 0 0 0 chr17 88402043 88402067 -6870584 + (CCA)n Simple_repeat Simple_repeat 2 25 0 1 1259 1207 48 7 0 chr17 88402366 88402512 -6870139 + B1_Mm SINE Alu 1 147 0 1 1259 823 139 88 0 chr17 88402583 88402720 -6869931 - B1_Mur4 SINE Alu 0 150 2 1 1259 764 250 11 44 chr17 88402876 88403056 -6869595 + B3 SINE B2 26 199 -17 1 1259 217 296 133 0 chr17 88403185 88403283 -6869368 + PB1 SINE Alu 11 121 -6 1 1259 522 0 0 0 chr17 88403406 88403464 -6869187 + (CAGG)n Simple_repeat Simple_repeat 2 59 0 1 1259 270 0 0 0 chr17 88403464 88403494 -6869157 + (GA)n Simple_repeat Simple_repeat 2 31 0 1 1259 456 19 0 0 chr17 88403494 88403547 -6869104 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 1 1259 312 256 114 23 chr17 88403826 88403914 -6868737 + PB1D10 SINE Alu 3 98 -19 1 1259 24 0 0 0 chr17 88403925 88403949 -6868702 + AT_rich Low_complexity Low_complexity 1 24 0 1 1259 213 47 45 23 chr17 88404047 88404091 -6868560 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 1 1259 719 61 10 0 chr17 88404091 88404189 -6868462 - B1_Mm SINE Alu 0 147 49 1 1259 332 195 12 61 chr17 88404125 88404207 -6868444 - MT2B LTR ERVL -337 264 187 1 1259 210 221 112 31 chr17 88404362 88404460 -6868191 + B2_Mm1t SINE B2 19 124 -69 1 1259 537 16 0 0 chr17 88404478 88404540 -6868111 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 1259 854 200 53 29 chr17 88405103 88405245 -6867406 + B3 SINE B2 2 149 -67 1 1259 414 0 0 0 chr17 88405245 88405291 -6867360 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1259 854 200 53 29 chr17 88405291 88405354 -6867297 + B3 SINE B2 150 212 -4 1 1259 642 241 29 0 chr17 88405356 88405493 -6867158 + B1_Mur1 SINE Alu 2 142 -7 1 1259 1322 77 50 0 chr17 88405577 88405759 -6866892 + B2_Mm2 SINE B2 2 192 -3 1 1259 217 0 29 29 chr17 88405904 88405938 -6866713 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 1259 937 124 52 0 chr17 88406010 88406163 -6866488 - B2_Mm2 SINE B2 -32 163 3 1 1259 246 32 0 0 chr17 88406609 88406640 -6866011 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1259 437 267 91 41 chr17 88406729 88406850 -6865801 - B1F2 SINE Alu -13 136 10 1 1259 289 22 0 62 chr17 88407219 88407267 -6865384 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 1 1259 249 33 0 0 chr17 88407415 88407445 -6865206 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1259 1174 41 0 7 chr17 88407445 88407592 -6865059 - B1_Mus2 SINE Alu 0 147 2 1 1259 206 103 51 0 chr17 88407628 88407667 -6864984 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 1 1259 289 333 0 0 chr17 88408761 88408845 -6863806 - PB1D10 SINE Alu -33 84 1 1 1259 762 175 52 46 chr17 88408876 88409050 -6863601 + B2_Mm2 SINE B2 2 176 -19 1 1259 917 184 124 5 chr17 88409479 88409665 -6862986 + B3 SINE B2 6 213 -3 1 1259 297 258 0 67 chr17 88409876 88409961 -6862690 + ID2 SINE ID 4 80 -3 1 1259 225 0 0 0 chr17 88410728 88410753 -6861898 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 1 1259 465 302 71 90 chr17 88410911 88411122 -6861529 - MER20 DNA MER1_type -7 212 6 1 1259 474 236 17 28 chr17 88411149 88411267 -6861384 + PB1D9 SINE Alu 1 115 -5 1 1259 578 23 23 0 chr17 88411408 88411496 -6861155 + L1Md_F2 LINE L1 6493 6582 0 1 1259 254 302 52 0 chr17 88411501 88411597 -6861054 - PB1D10 SINE Alu -13 104 4 1 1259 763 211 34 34 chr17 88411644 88411821 -6860830 - B3A SINE B2 -14 184 8 1 1259 22 0 0 0 chr17 88412075 88412097 -6860554 + AT_rich Low_complexity Low_complexity 1 22 0 1 1259 510 228 10 10 chr17 88412187 88412301 -6860350 - PB1 SINE Alu -36 113 7 1 1259 667 228 0 29 chr17 88412334 88412474 -6860177 - B1_Mur2 SINE Alu -13 136 1 1 1259 717 172 27 27 chr17 88412508 88412657 -6859994 + B1_Mur4 SINE Alu 1 149 -1 1 1259 1103 103 62 6 chr17 88412682 88412858 -6859793 + B2_Mm1a SINE B2 1 186 -7 1 1259 358 236 338 0 chr17 88412858 88413006 -6859645 - B3 SINE B2 -17 199 2 1 1259 433 226 130 0 chr17 88413039 88413154 -6859497 - B1_Mur1 SINE Alu -19 130 1 1 1259 470 236 0 0 chr17 88413406 88413495 -6859156 + ID_B1 SINE B4 127 215 -9 1 1259 239 289 33 50 chr17 88413495 88413521 -6859130 - YREP_Mm Unknown Unknown -1533 274 162 1 1259 225 0 0 0 chr17 88413998 88414023 -6858628 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 1259 453 19 0 0 chr17 88414023 88414077 -6858574 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1259 299 255 58 48 chr17 88414100 88414203 -6858448 - PB1 SINE Alu 0 127 24 1 1259 504 284 36 36 chr17 88414268 88414458 -6858193 + B3A SINE B2 3 188 -7 1 1259 561 202 87 9 chr17 88414582 88414697 -6857954 - B1_Mm SINE Alu -23 124 1 1 1259 307 247 10 133 chr17 88414614 88414712 -6857939 - MT2B LTR ERVL -361 240 155 1 1259 621 167 0 0 chr17 88415304 88415454 -6857197 + G-rich Low_complexity Low_complexity 1 150 0 1 1259 1201 28 21 0 chr17 88415630 88415774 -6856877 + B1_Mus2 SINE Alu 1 147 0 1 1259 306 165 89 56 chr17 88416133 88416223 -6856428 + L1MC4 LINE L1 6821 6913 -1129 1 1259 324 0 0 0 chr17 88416223 88416259 -6856392 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 1 1259 233 219 41 0 chr17 88416996 88417069 -6855582 + L1M5 LINE L1 5409 5484 -640 1 1259 909 132 14 0 chr17 88417107 88417251 -6855400 + B1_Mur4 SINE Alu 2 147 -3 1 1259 200 238 16 16 chr17 88417257 88417321 -6855330 + GA-rich Low_complexity Low_complexity 1 64 0 1 1259 2053 104 27 45 chr17 88417773 88418105 -6854546 - ORR1A3 LTR MaLR 0 326 1 1 1259 871 186 96 20 chr17 88418135 88418332 -6854319 + B3 SINE B2 5 216 0 1 1259 2212 118 129 0 chr17 88418921 88419294 -6853357 - MTC LTR MaLR 0 421 1 1 1259 243 88 0 0 chr17 88419516 88419550 -6853101 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1 1259 974 80 73 0 chr17 88419555 88419692 -6852959 - B1_Mus1 SINE Alu 0 148 2 1 1259 662 177 88 7 chr17 88419728 88419876 -6852775 + ORR1C2 LTR MaLR 225 384 0 1 1259 191 280 39 39 chr17 88419975 88420027 -6852624 + L2c LINE L2 3113 3164 -223 1 1259 218 222 0 16 chr17 88420059 88420103 -6852548 + A-rich Low_complexity Low_complexity 3 46 0 1 1259 1260 27 0 0 chr17 88420103 88420251 -6852400 + B1_Mus1 SINE Alu 1 148 0 1 1259 218 222 0 16 chr17 88420251 88420270 -6852381 + A-rich Low_complexity Low_complexity 47 65 0 1 1259 414 0 0 0 chr17 88420344 88420390 -6852261 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1259 231 36 0 0 chr17 88420566 88420594 -6852057 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1259 21 36 0 0 chr17 88421036 88421064 -6851587 + AT_rich Low_complexity Low_complexity 1 28 0 1 1259 401 289 52 72 chr17 88421379 88421573 -6851078 - B3A SINE B2 -8 190 1 1 1259 546 218 117 56 chr17 88421606 88421786 -6850865 + B3 SINE B2 1 191 -25 1 1259 231 36 0 0 chr17 88421916 88421944 -6850707 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 1 1259 776 266 104 52 chr17 88422276 88422546 -6850105 - B4A SINE B4 0 292 9 1 1259 1157 74 0 0 chr17 88422585 88422733 -6849918 - B1_Mus1 SINE Alu 0 148 1 1 1259 277 288 177 39 chr17 88422792 88422922 -6849729 + RSINE1 SINE B4 4 151 -14 1 1259 888 156 73 23 chr17 88422944 88423121 -6849530 + B2_Mm2 SINE B2 2 187 -8 1 1259 288 71 0 51 chr17 88423257 88423316 -6849335 + (CAAA)n Simple_repeat Simple_repeat 2 57 0 1 1259 370 275 215 8 chr17 88423412 88423533 -6849118 + B3A SINE B2 15 160 -38 1 1259 1141 83 37 32 chr17 88423849 88424036 -6848615 + B2_Mm2 SINE B2 1 188 -7 1 1259 690 251 46 16 chr17 88424043 88424237 -6848414 + B3 SINE B2 5 204 -12 1 1259 314 277 110 28 chr17 88425547 88425692 -6846959 + RSINE1 SINE B4 2 158 -7 1 1259 269 216 111 119 chr17 88426513 88426639 -6846012 + PB1D10 SINE Alu 3 127 0 1 1259 1171 55 0 7 chr17 88426685 88426831 -6845820 + B1_Mus1 SINE Alu 4 148 0 1 1259 22 0 0 0 chr17 88426967 88426989 -6845662 + AT_rich Low_complexity Low_complexity 1 22 0 1 1259 1943 43 0 0 chr17 88427125 88427359 -6845292 - MTA_Mm LTR MaLR 0 396 163 1 1259 1119 49 13 34 chr17 88427359 88427508 -6845143 + B1_Mus2 SINE Alu 2 147 0 1 1259 1320 96 21 0 chr17 88427608 88427795 -6844856 + B2_Mm1t SINE B2 2 192 -1 1 1259 322 175 291 26 chr17 88428053 88428097 -6844554 + B1F1 SINE Alu 2 52 -97 1 1259 198 0 0 0 chr17 88428097 88428119 -6844532 + (CAGG)n Simple_repeat Simple_repeat 1 22 0 1 1259 322 175 291 26 chr17 88428119 88428191 -6844460 + B1F1 SINE Alu 53 149 0 1 1259 1031 74 82 0 chr17 88428393 88428528 -6844123 - B1_Mus2 SINE Alu 0 147 2 1 1259 198 0 0 0 chr17 88428830 88428852 -6843799 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1259 397 240 138 126 chr17 88429006 88429108 -6843543 - B4A SINE B4 -2 290 210 1 1259 636 253 64 12 chr17 88429108 88429280 -6843371 - B3A SINE B2 -16 182 2 1 1259 397 240 138 126 chr17 88429280 88429344 -6843307 - B4A SINE B4 -83 209 123 1 1259 582 287 108 18 chr17 88429480 88429647 -6843004 - B3A SINE B2 -16 182 1 1 1259 258 275 25 0 chr17 88429802 88429882 -6842769 + MIRb SINE MIR 112 193 -75 1 1259 654 233 84 42 chr17 88429968 88430057 -6842594 + B3A SINE B2 5 96 -102 1 1259 2927 54 62 0 chr17 88430057 88430430 -6842221 + MTA_Mm LTR MaLR 1 396 0 1 1259 654 233 84 42 chr17 88430430 88430506 -6842145 + B3A SINE B2 97 177 -21 1 1259 304 248 197 14 chr17 88430697 88430910 -6841741 + ERVL-B4-int LTR ERVL 3474 3725 -1989 1 1259 378 250 51 51 chr17 88430960 88431116 -6841535 + ERVL-B4-int LTR ERVL 3918 4073 -1684 1 1259 885 174 227 0 chr17 88431408 88431580 -6841071 + B3 SINE B2 2 212 -4 1 1259 385 304 9 0 chr17 88431624 88431736 -6840915 + ERVL-B4-int LTR ERVL 4635 4747 -967 1 1259 695 282 65 49 chr17 88431757 88432063 -6840588 + ERVL-B4-int LTR ERVL 4832 5142 -572 1 1259 403 278 17 0 chr17 88432090 88432205 -6840446 + ERVL-B4-int LTR ERVL 5214 5330 -384 1 1259 790 42 118 0 chr17 88432343 88432462 -6840189 - B1_Mus2 SINE Alu 0 147 15 1 1259 419 198 44 0 chr17 88432462 88432553 -6840098 - PB1D9 SINE Alu -14 106 12 1 1259 554 233 163 27 chr17 88432553 88432569 -6840082 - ID_B1 SINE B4 -2 231 49 1 1259 583 200 71 18 chr17 88432619 88432731 -6839920 + PB1D9 SINE Alu 2 119 -1 1 1259 377 317 68 39 chr17 88432769 88432993 -6839658 + MLT2B4 LTR ERVL 65 306 -91 1 1259 300 287 200 98 chr17 88433146 88433471 -6839180 - MTEb LTR MaLR -2 377 2 1 1259 294 309 83 0 chr17 88433562 88433646 -6839005 - RSINE1 SINE B4 -8 157 67 1 1259 263 288 17 0 chr17 88433897 88433956 -6838695 - ID4 SINE ID -22 61 2 1 1259 256 228 53 0 chr17 88433919 88433976 -6838675 - ZP3AR Satellite Satellite -132 80 21 1 1259 252 0 0 0 chr17 88434487 88434515 -6838136 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 1259 306 233 32 53 chr17 88434543 88434562 -6838089 - B4A SINE B4 -196 96 4 1 1259 461 158 13 0 chr17 88434562 88434638 -6838013 - B3 SINE B2 -136 80 4 1 1259 381 278 42 25 chr17 88434872 88434990 -6837661 - PB1D9 SINE Alu 0 120 1 1 1259 234 268 199 19 chr17 88435032 88435188 -6837463 - Looper DNA PiggyBac -598 960 777 1 1259 501 154 162 9 chr17 88435389 88435486 -6837165 + B1_Mus2 SINE Alu 22 135 -12 1 1259 279 0 0 0 chr17 88435486 88435517 -6837134 + (CAAAA)n Simple_repeat Simple_repeat 4 34 0 1 1259 1066 53 6 45 chr17 88435684 88435841 -6836810 + B2_Mm2 SINE B2 41 191 -4 1 1259 618 217 232 11 chr17 88435886 88436063 -6836588 + B3 SINE B2 1 216 0 1 1259 736 104 9 0 chr17 88436090 88436196 -6836455 + B2_Mm1t SINE B2 2 108 -85 1 1259 478 318 38 8 chr17 88436722 88436855 -6835796 + B1F SINE Alu 1 137 -12 1 1259 863 246 76 5 chr17 88437360 88437544 -6835107 - B3 SINE B2 -13 203 7 1 1259 255 280 104 15 chr17 88438213 88438347 -6834304 - L1MC LINE L1 -2122 5760 5615 1 1259 299 194 15 0 chr17 88438465 88438532 -6834119 - L1MB2 LINE L1 -262 5909 5842 1 1259 250 203 0 78 chr17 88439003 88439067 -6833584 - PB1D7 SINE Alu 0 120 62 1 1259 22 35 0 0 chr17 88439255 88439284 -6833367 + AT_rich Low_complexity Low_complexity 1 29 0 1 1259 481 77 0 0 chr17 88439396 88439461 -6833190 - B1_Mus1 SINE Alu -80 68 4 1 1259 331 185 0 0 chr17 88439403 88439468 -6833183 - ID_B1 SINE B4 -83 141 77 1 1259 252 274 32 0 chr17 88439619 88439681 -6832970 + ID4 SINE ID 5 68 -15 1 1259 307 269 39 0 chr17 88440059 88440137 -6832514 - PB1D10 SINE Alu -21 96 16 1 1259 251 164 55 0 chr17 88440658 88440713 -6831938 - ID_B1 SINE B4 -2 222 165 1 1259 234 194 159 50 chr17 88440713 88440756 -6831895 - PB1D10 SINE Alu 0 109 16 1 1259 311 268 64 104 chr17 88440948 88441073 -6831578 - B1F SINE Alu -20 129 10 1 1259 398 254 58 58 chr17 88441113 88441251 -6831400 - B1F SINE Alu -11 138 1 1 1259 500 307 14 28 chr17 88441454 88441595 -6831056 + B1_Mur2 SINE Alu 3 141 -8 1 1259 346 287 37 25 chr17 88441631 88441737 -6830914 + PB1D7 SINE Alu 1 117 -10 1 1259 369 230 51 104 chr17 88443281 88443435 -6829216 - ID_B1 SINE B4 -56 236 90 1 1259 34 55 0 0 chr17 88443625 88443680 -6828971 + AT_rich Low_complexity Low_complexity 1 55 0 1 1259 833 162 0 22 chr17 88443776 88443915 -6828736 + B1_Mur3 SINE Alu 1 136 -13 1 1259 180 0 0 0 chr17 88443918 88443938 -6828713 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 1259 343 294 163 0 chr17 88444738 88444922 -6827729 - ID_B1 SINE B4 -9 215 2 1 1259 764 185 214 0 chr17 88445067 88445245 -6827406 + B3 SINE B2 1 216 0 1 1259 22 0 0 0 chr17 88445493 88445515 -6827136 + AT_rich Low_complexity Low_complexity 1 22 0 1 1259 254 217 33 0 chr17 88445588 88445648 -6827003 - PB1D9 SINE Alu 0 120 59 1 1259 430 159 148 16 chr17 88445700 88445828 -6826823 - RMER1C Other Other 0 1342 1198 1 1259 475 156 56 0 chr17 88445828 88445918 -6826733 - B1_Mur3 SINE Alu -13 136 42 1 1259 280 309 94 55 chr17 88445918 88446030 -6826621 - ID_B1 SINE B4 -13 211 2 1 1259 310 279 0 59 chr17 88446249 88446367 -6826284 + B4 SINE B4 7 117 -175 1 1259 2461 112 160 122 chr17 88446335 88446998 -6825653 - RMER6A LTR ERVK -66 690 3 1 1259 259 252 17 120 chr17 88447675 88447792 -6824859 + MT2B LTR ERVL 152 256 -345 1 1259 594 257 0 39 chr17 88447688 88447842 -6824809 + B1_Mur1 SINE Alu 2 149 0 1 1259 427 95 0 26 chr17 88447874 88447950 -6824701 + (TTTTC)n Simple_repeat Simple_repeat 4 77 0 1 1259 270 0 0 0 chr17 88447952 88447982 -6824669 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 1 1259 1315 69 46 0 chr17 88447982 88448156 -6824495 - B2_Mm2 SINE B2 -12 183 2 1 1259 681 261 106 11 chr17 88448252 88448516 -6824135 - L1MB1 LINE L1 -132 6036 5748 1 1259 395 264 70 33 chr17 88448666 88448839 -6823812 - L1MB1 LINE L1 -522 5667 5493 1 1259 290 217 43 0 chr17 88448854 88448923 -6823728 - ID4 SINE ID -9 74 3 1 1259 398 236 119 18 chr17 88448949 88449117 -6823534 - B3 SINE B2 -31 185 1 1 1259 743 238 106 3 chr17 88449132 88449449 -6823202 - L1MB1 LINE L1 -684 5484 5133 1 1259 185 0 40 0 chr17 88450073 88450098 -6822553 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1259 571 168 128 0 chr17 88450144 88450269 -6822382 + B1_Mur4 SINE Alu 9 149 -1 1 1259 1013 216 19 10 chr17 88450666 88450872 -6821779 - B3 SINE B2 -8 208 1 1 1259 1150 55 14 0 chr17 88450939 88451084 -6821567 + B1_Mm SINE Alu 1 147 0 1 1259 225 65 0 0 chr17 88451084 88451115 -6821536 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1259 425 229 102 39 chr17 88451151 88451278 -6821373 + B1_Mur1 SINE Alu 2 136 -13 1 1259 295 194 53 53 chr17 88451304 88451380 -6821271 - B1F SINE Alu -21 128 53 1 1259 1412 75 0 31 chr17 88451454 88451646 -6821005 + B2_Mm2 SINE B2 2 187 -8 1 1259 386 226 21 11 chr17 88451899 88451993 -6820658 - PB1D10 SINE Alu -2 115 21 1 1259 439 327 22 97 chr17 88452036 88452378 -6820273 + B4 SINE B4 2 281 -11 1 1259 210 71 0 0 chr17 88452506 88452534 -6820117 + (ATGGTG)n Simple_repeat Simple_repeat 2 29 0 1 1259 276 100 0 0 chr17 88452537 88452577 -6820074 + (GGA)n Simple_repeat Simple_repeat 1 40 0 1 1259 1289 48 0 0 chr17 88453005 88453173 -6819478 + B2_Mm2 SINE B2 2 169 -26 1 1259 1020 93 7 7 chr17 88453179 88453330 -6819321 + B2_Mm1a SINE B2 2 152 -41 1 1259 279 0 0 0 chr17 88453332 88453363 -6819288 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1 1259 257 327 129 18 chr17 88453444 88453668 -6818983 + L1ME3A LINE L1 5880 6128 -45 1 1259 790 162 44 7 chr17 88454243 88454380 -6818271 - B1_Mus2 SINE Alu -5 142 1 1 1259 874 201 69 0 chr17 88454520 88454709 -6817942 + B3 SINE B2 15 216 0 1 1259 911 47 156 0 chr17 88454727 88454855 -6817796 + B1_Mus1 SINE Alu 1 148 0 1 1259 907 215 4 108 chr17 88454925 88455165 -6817486 - B3 SINE B2 -1 215 1 1 1259 223 269 0 0 chr17 88455576 88455628 -6817023 + B3A SINE B2 2 53 -145 1 1259 713 250 26 26 chr17 88456363 88456556 -6816095 + B3A SINE B2 5 197 -1 1 1259 831 229 69 0 chr17 88456628 88456803 -6815848 + B3 SINE B2 1 187 -29 1 1259 195 100 0 0 chr17 88456939 88456969 -6815682 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1259 406 211 96 0 chr17 88457425 88457529 -6815122 - PB1D9 SINE Alu 0 120 7 1 1259 348 250 0 11 chr17 88457457 88457546 -6815105 - MT2B LTR ERVL -360 241 154 1 1259 180 0 0 0 chr17 88457553 88457573 -6815078 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1259 320 194 0 16 chr17 88457589 88457652 -6814999 + B1F1 SINE Alu 82 143 -6 1 1259 365 136 0 15 chr17 88457998 88458065 -6814586 + GA-rich Low_complexity Low_complexity 5 70 0 1 1259 504 165 187 16 chr17 88458350 88458473 -6814178 + B1_Mus2 SINE Alu 3 146 -1 1 1259 486 267 96 28 chr17 88458679 88458856 -6813795 + B3A SINE B2 2 190 -8 1 1259 1219 48 0 7 chr17 88458877 88459024 -6813627 + B1_Mm SINE Alu 2 147 0 1 1259 405 90 0 0 chr17 88459024 88459091 -6813560 + (A)n Simple_repeat Simple_repeat 1 67 0 1 1259 308 278 56 0 chr17 88459124 88459232 -6813419 - PB1D10 SINE Alu -1 116 3 1 1259 1627 174 62 11 chr17 88459284 88459638 -6813013 + ORR1D1 LTR MaLR 1 372 -2 1 1259 367 313 26 9 chr17 88459638 88459754 -6812897 + PB1D9 SINE Alu 1 118 -2 1 1259 540 245 116 6 chr17 88459754 88459918 -6812733 + B3A SINE B2 2 183 -15 1 1259 342 0 0 0 chr17 88459930 88459968 -6812683 + (TC)n Simple_repeat Simple_repeat 2 39 0 1 1259 339 25 0 0 chr17 88459986 88460026 -6812625 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1259 396 0 0 0 chr17 88460057 88460101 -6812550 + (GAAA)n Simple_repeat Simple_repeat 3 46 0 1 1259 247 266 256 38 chr17 88460264 88460370 -6812281 + L1MA6 LINE L1 5650 5781 -408 1 1259 234 91 0 0 chr17 88460370 88460403 -6812248 + (CCTG)n Simple_repeat Simple_repeat 2 34 0 1 1259 932 242 124 35 chr17 88460403 88460852 -6811799 + L1MA6 LINE L1 5782 6277 -23 1 1259 432 158 0 0 chr17 88460864 88460940 -6811711 + (TA)n Simple_repeat Simple_repeat 1 76 0 1 1259 429 66 0 0 chr17 88460939 88461000 -6811651 + (GA)n Simple_repeat Simple_repeat 2 62 0 1 1259 524 232 0 26 chr17 88461013 88461128 -6811523 + PB1D9 SINE Alu 6 117 -3 1 1259 25 51 0 0 chr17 88461818 88461857 -6810794 + AT_rich Low_complexity Low_complexity 1 39 0 1 1259 525 278 82 50 chr17 88461857 88462016 -6810635 - RSINE1 SINE B4 0 165 2 1 1259 22 0 0 0 chr17 88463094 88463116 -6809535 + AT_rich Low_complexity Low_complexity 1 22 0 1 1259 21 36 0 0 chr17 88464188 88464216 -6808435 + GC_rich Low_complexity Low_complexity 1 28 0 1 1259 219 36 0 0 chr17 88464278 88464306 -6808345 + (CCG)n Simple_repeat Simple_repeat 2 29 0 1 1259 495 167 0 0 chr17 88464377 88464515 -6808136 + (CGG)n Simple_repeat Simple_repeat 2 139 0 1 1259 21 71 0 0 chr17 88464697 88464739 -6807912 + GC_rich Low_complexity Low_complexity 1 42 0 1 1259 25 83 0 0 chr17 88464793 88464853 -6807798 + GC_rich Low_complexity Low_complexity 1 60 0 1 1259 24 32 0 0 chr17 88465045 88465076 -6807575 + GC_rich Low_complexity Low_complexity 1 31 0 1 1259 360 111 0 0 chr17 88465280 88465334 -6807317 + (CTG)n Simple_repeat Simple_repeat 2 55 0 1 1259 221 200 42 28 chr17 88465404 88465476 -6807175 + G-rich Low_complexity Low_complexity 3 75 0 1 1259 333 118 0 0 chr17 88466568 88466619 -6806032 + (T)n Simple_repeat Simple_repeat 1 51 0 1 1259 996 85 0 0 chr17 88466619 88466760 -6805891 - B1_Mus1 SINE Alu 0 148 8 1 1259 1096 157 35 0 chr17 88466932 88467130 -6805521 + B3 SINE B2 1 205 -11 1 1259 22 0 0 0 chr17 88467137 88467159 -6805492 + AT_rich Low_complexity Low_complexity 1 22 0 1 1259 303 308 0 19 chr17 88467170 88467276 -6805375 + PB1D10 SINE Alu 1 104 -13 1 1259 677 101 0 0 chr17 88467425 88467524 -6805127 + B1_Mus2 SINE Alu 49 147 0 1 1259 872 162 7 7 chr17 88467668 88467817 -6804834 + B1_Mur4 SINE Alu 1 149 -1 1 1259 1134 106 67 6 chr17 88467822 88468002 -6804649 + B2_Mm2 SINE B2 2 192 -3 1 1259 23 33 0 0 chr17 88468126 88468156 -6804495 + AT_rich Low_complexity Low_complexity 1 30 0 1 1259 259 265 45 73 chr17 88468173 88468283 -6804368 - RSINE1 SINE B4 -2 163 57 1 1259 981 88 220 0 chr17 88468568 88468727 -6803924 + B2_Mm2 SINE B2 2 195 0 1 1259 284 175 16 0 chr17 88468727 88468790 -6803861 + GA-rich Low_complexity Low_complexity 1 64 0 1 1259 484 256 56 8 chr17 88468799 88468925 -6803726 - B1_Mur1 SINE Alu -5 144 13 1 1259 1500 63 0 11 chr17 88469090 88469281 -6803370 - B2_Mm1a SINE B2 -3 190 2 1 1259 1131 69 0 7 chr17 88469309 88469455 -6803196 - B1_Mm SINE Alu -2 145 1 1 1259 280 283 43 11 chr17 88469981 88470074 -6802577 - PB1D10 SINE Alu 0 117 22 1 1259 586 258 0 0 chr17 88470545 88470673 -6801978 + B1F SINE Alu 1 128 -21 1 1259 379 273 116 32 chr17 88470768 88470957 -6801694 - B4A SINE B4 -74 218 14 1 1259 225 83 0 0 chr17 88470973 88471009 -6801642 + (TTGG)n Simple_repeat Simple_repeat 4 39 0 1 1259 246 32 0 0 chr17 88471923 88471954 -6800697 + (GA)n Simple_repeat Simple_repeat 1 31 0 1 1259 366 325 32 38 chr17 88471982 88472139 -6800512 + MIR SINE MIR 78 233 -29 1 1259 1493 48 43 0 chr17 88472258 88472445 -6800206 + B2_Mm2 SINE B2 1 195 0 1 1259 589 167 0 66 chr17 88472796 88472918 -6799733 + PB1D9 SINE Alu 7 120 0 1 1259 1145 22 0 0 chr17 88472919 88473055 -6799596 + L1_Mus1 LINE L1 6430 6565 -2 1 1259 1136 66 0 0 chr17 88473377 88473514 -6799137 + B1_Mus2 SINE Alu 1 137 -10 1 1259 183 42 0 0 chr17 88473514 88473538 -6799113 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1260 449 172 11 0 chr17 88474099 88474192 -6798459 + (TA)n Simple_repeat Simple_repeat 1 94 0 1 1260 276 225 145 51 chr17 88474248 88474365 -6798286 + MTE-int LTR MaLR 7 134 -1446 1 1260 396 283 52 3 chr17 88474396 88474609 -6798042 + ORR1E LTR MaLR 42 296 -83 1 1260 943 247 148 10 chr17 88474618 88475011 -6797640 + Lx7 LINE L1 7235 7681 -15 1 1260 426 221 67 148 chr17 88475052 88475201 -6797450 - B1_Mm SINE Alu -10 137 1 1 1260 667 279 31 16 chr17 88475220 88475413 -6797238 - B3A SINE B2 -2 196 1 1 1260 603 0 0 0 chr17 88475422 88475489 -6797162 + (TTCC)n Simple_repeat Simple_repeat 3 69 0 1 1260 1138 239 54 16 chr17 88475606 88475920 -6796731 + MTE-int LTR MaLR 27 352 -1228 1 1260 662 190 29 21 chr17 88475928 88476075 -6796576 + B1_Mur4 SINE Alu 4 150 0 1 1260 535 234 83 21 chr17 88476105 88476280 -6796371 + MTE-int LTR MaLR 345 531 -1049 1 1260 547 227 31 8 chr17 88476280 88476409 -6796242 + RSINE1 SINE B4 3 134 -31 1 1260 1455 255 44 13 chr17 88476410 88476447 -6796204 - MTD LTR MaLR -8 411 375 1 1260 744 208 179 5 chr17 88476447 88476631 -6796020 + B3 SINE B2 1 216 0 1 1260 1455 255 44 13 chr17 88476631 88476978 -6795673 - MTD LTR MaLR -45 374 16 1 1260 213 132 0 0 chr17 88476995 88477033 -6795618 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1260 2170 270 93 84 chr17 88477047 88477207 -6795444 + MTE-int LTR MaLR 515 672 -908 1 1260 1122 108 0 0 chr17 88477207 88477355 -6795296 + B1_Mus1 SINE Alu 1 148 0 1 1260 2170 270 93 84 chr17 88477355 88478006 -6794645 + MTE-int LTR MaLR 673 1346 -234 1 1260 1165 63 0 0 chr17 88478006 88478149 -6794502 + B1_Mus2 SINE Alu 2 144 -3 1 1260 212 0 36 0 chr17 88478149 88478177 -6794474 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1260 2170 270 93 84 chr17 88478177 88478284 -6794367 + MTE-int LTR MaLR 1347 1443 -137 1 1260 360 43 0 0 chr17 88478388 88478434 -6794217 + (TC)n Simple_repeat Simple_repeat 1 46 0 1 1260 26 30 0 0 chr17 88478450 88478483 -6794168 + AT_rich Low_complexity Low_complexity 1 33 0 1 1260 426 304 0 61 chr17 88478557 88478704 -6793947 + ORR1E LTR MaLR 16 153 -206 1 1260 279 0 0 0 chr17 88478704 88478735 -6793916 + (T)n Simple_repeat Simple_repeat 1 31 0 1 1260 1152 48 0 27 chr17 88478735 88478885 -6793766 - B1_Mus2 SINE Alu 0 147 2 1 1260 352 281 68 64 chr17 88478887 88479014 -6793637 + ORR1E LTR MaLR 139 270 -89 1 1260 2082 175 32 10 chr17 88479014 88479424 -6793227 - MTC LTR MaLR 0 421 3 1 1260 352 281 68 64 chr17 88479424 88479516 -6793135 + ORR1E LTR MaLR 271 359 0 1 1260 1102 178 118 28 chr17 88480352 88480641 -6792010 - MTD LTR MaLR -104 315 1 1 1260 252 86 0 0 chr17 88480768 88480803 -6791848 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1260 360 0 0 0 chr17 88480803 88480842 -6791809 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 1260 315 0 0 0 chr17 88481323 88481358 -6791293 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1260 1436 179 65 103 chr17 88481457 88481856 -6790795 + ORR1C2 LTR MaLR 1 384 0 1 1260 411 247 43 0 chr17 88481889 88481982 -6790669 - PB1D10 SINE Alu -6 111 15 1 1260 883 249 25 0 chr17 88482109 88482306 -6790345 - B3 SINE B2 -13 203 2 1 1260 1271 109 11 11 chr17 88482483 88482668 -6789983 - B2_Mm2 SINE B2 -9 186 2 1 1260 216 0 0 0 chr17 88482913 88482937 -6789714 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1260 925 157 0 7 chr17 88482944 88483092 -6789559 + B1_Mus2 SINE Alu 1 147 0 1 1260 657 131 0 0 chr17 88483098 88483205 -6789446 + (GAAA)n Simple_repeat Simple_repeat 2 108 0 1 1260 855 123 45 15 chr17 88483937 88484069 -6788582 - B1_Mur4 SINE Alu -13 137 2 1 1260 1277 82 5 10 chr17 88484093 88484289 -6788362 - B2_Mm2 SINE B2 0 195 1 1 1260 333 292 58 116 chr17 88484410 88484600 -6788051 + MIRb SINE MIR 6 184 -84 1 1260 386 313 106 29 chr17 88484666 88484873 -6787778 - ID_B1 SINE B4 0 224 2 1 1260 670 250 0 0 chr17 88485096 88485224 -6787427 - B1_Mur2 SINE Alu -19 130 3 1 1260 183 42 0 0 chr17 88485270 88485294 -6787357 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1 1260 422 305 29 41 chr17 88485423 88485569 -6787082 + B3 SINE B2 42 187 -29 1 1260 375 78 0 0 chr17 88485569 88485620 -6787031 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 1260 422 305 29 41 chr17 88485620 88485644 -6787007 + B3 SINE B2 188 210 -6 1 1260 1361 88 15 25 chr17 88485735 88485932 -6786719 + B2_Mm2 SINE B2 1 195 0 1 1260 513 0 0 0 chr17 88486106 88486163 -6786488 + (TCTA)n Simple_repeat Simple_repeat 1 57 0 1 1260 240 98 32 32 chr17 88486194 88486257 -6786394 + (TTTA)n Simple_repeat Simple_repeat 1 63 0 1 1260 732 41 0 0 chr17 88486267 88486364 -6786287 - B1_Mus2 SINE Alu -50 97 1 1 1260 386 212 0 83 chr17 88486364 88486375 -6786276 - MT2B LTR ERVL -349 252 154 1 1260 1355 77 22 0 chr17 88486596 88486778 -6785873 - B2_Mm2 SINE B2 -7 188 3 1 1260 219 69 0 0 chr17 88486789 88486818 -6785833 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 1260 669 209 270 7 chr17 88486828 88486931 -6785720 - Lx9 LINE L1 -20 7624 7498 1 1260 492 62 0 0 chr17 88486931 88486995 -6785656 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 1 1260 669 209 270 7 chr17 88486995 88487161 -6785490 - Lx9 LINE L1 -147 7497 7284 1 1260 1217 49 0 0 chr17 88487173 88487316 -6785335 - B1_Mus2 SINE Alu 0 147 5 1 1260 251 246 0 0 chr17 88487360 88487417 -6785234 - Lx9 LINE L1 -373 7271 7215 1 1260 462 309 89 26 chr17 88487566 88487835 -6784816 - Zaphod DNA Tip100 -1195 2836 2551 1 1260 396 59 0 0 chr17 88488943 88488994 -6783657 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 1260 242 95 0 23 chr17 88489368 88489411 -6783240 + (TCCCC)n Simple_repeat Simple_repeat 5 46 0 1 1260 1232 48 0 0 chr17 88489441 88489587 -6783064 - B1_Mm SINE Alu 0 147 2 1 1260 928 152 0 0 chr17 88489589 88489734 -6782917 - B1_Mur4 SINE Alu 0 150 6 1 1260 1359 99 21 0 chr17 88489995 88490186 -6782465 + B2_Mm2 SINE B2 1 195 0 1 1260 1061 67 0 0 chr17 88490262 88490396 -6782255 - B1_Mus2 SINE Alu -13 134 1 1 1260 293 248 77 168 chr17 88490744 88490828 -6781823 - B3A SINE B2 -55 143 57 1 1260 1573 58 0 0 chr17 88490828 88491019 -6781632 + B2_Mm1a SINE B2 1 191 -2 1 1260 293 248 77 168 chr17 88491019 88491089 -6781562 - B3A SINE B2 -142 56 3 1 1260 1570 48 0 16 chr17 88491191 88491381 -6781270 - B2_Mm1a SINE B2 -5 188 2 1 1260 575 243 58 31 chr17 88491441 88491477 -6781174 + L1MB3 LINE L1 5208 5242 -904 1 1260 2385 103 0 12 chr17 88491477 88491810 -6780841 + ORR1A4 LTR MaLR 1 329 0 1 1260 623 241 77 2 chr17 88491810 88492042 -6780609 + L1MB3 LINE L1 5243 5487 -813 1 1260 243 0 0 0 chr17 88492042 88492069 -6780582 + (CTG)n Simple_repeat Simple_repeat 1 27 0 1 1260 314 318 53 62 chr17 88492069 88492277 -6780374 + L1MB3 LINE L1 5569 5774 -406 1 1260 450 185 0 0 chr17 88492344 88492425 -6780226 + PB1 SINE Alu 39 119 -8 1 1260 379 138 129 34 chr17 88492516 88492623 -6780028 + B1_Mus2 SINE Alu 10 147 0 1 1260 329 305 69 23 chr17 88492645 88492863 -6779788 + L1MB3 LINE L1 5892 6119 -52 1 1260 283 358 34 10 chr17 88492887 88493093 -6779558 - MIRc SINE MIR -1 267 57 1 1260 434 243 0 18 chr17 88494121 88494230 -6778421 + B1_Mur2 SINE Alu 43 149 0 1 1260 207 0 0 0 chr17 88494235 88494258 -6778393 + (CAGA)n Simple_repeat Simple_repeat 4 26 0 1 1260 1454 54 27 0 chr17 88494297 88494481 -6778170 + B2_Mm2 SINE B2 2 190 -5 1 1260 600 195 9 0 chr17 88494594 88494707 -6777944 - B3A SINE B2 -84 114 1 1 1260 407 170 116 74 chr17 88495417 88495538 -6777113 - B1_Mur1 SINE Alu 0 149 24 1 1260 683 215 39 32 chr17 88496232 88496386 -6776265 + RSINE1 SINE B4 3 157 -8 1 1260 300 265 33 137 chr17 88496789 88496942 -6775709 + ID_B1 SINE B4 80 216 -8 1 1260 575 194 47 24 chr17 88497093 88497220 -6775431 - B1_Mur4 SINE Alu -20 130 1 1 1260 438 69 0 0 chr17 88497648 88497706 -6774945 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 1260 372 94 0 0 chr17 88498178 88498231 -6774420 + (TTCA)n Simple_repeat Simple_repeat 4 56 0 1 1260 273 57 0 0 chr17 88498275 88498310 -6774341 + (TCTCTG)n Simple_repeat Simple_repeat 2 36 0 1 1260 355 173 117 63 chr17 88498342 88498453 -6774198 - PB1D10 SINE Alu 0 117 1 1 1260 352 268 105 8 chr17 88498474 88498598 -6774053 - B4A SINE B4 -72 220 85 1 1260 359 298 65 51 chr17 88498590 88498806 -6773845 - LTR81A LTR ERV1? -1131 219 1 1 1260 303 231 326 27 chr17 88499117 88499375 -6773276 - L1MB7 LINE L1 -15 6169 5835 1 1260 432 0 0 0 chr17 88499381 88499429 -6773222 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 1 1260 1222 50 0 0 chr17 88499431 88499591 -6773060 - B2_Mm2 SINE B2 -34 161 2 1 1260 234 0 0 0 chr17 88500059 88500085 -6772566 + (TC)n Simple_repeat Simple_repeat 2 27 0 1 1260 387 0 0 0 chr17 88500085 88500127 -6772524 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1260 656 272 122 79 chr17 88500849 88500918 -6771733 - MLT1A LTR MaLR 0 374 324 3 1260 1374 99 11 0 chr17 88500918 88501109 -6771542 - B2_Mm1t SINE B2 0 193 1 4 1260 656 272 122 79 chr17 88501109 88501382 -6771269 - MLT1A LTR MaLR -51 323 17 3 1260 3514 20 2 2 chr17 88501435 88501831 -6770820 + MTA_Mm LTR MaLR 1 396 0 5 1260 285 29 0 0 chr17 88502460 88502494 -6770157 + (TCC)n Simple_repeat Simple_repeat 2 35 0 6 1260 1205 54 30 0 chr17 88502498 88502665 -6769986 - B2_Mm2 SINE B2 -23 172 1 7 1260 245 305 74 0 chr17 88503097 88503192 -6769459 - PB1D10 SINE Alu -6 111 10 8 1260 22 0 0 0 chr17 88503223 88503245 -6769406 + AT_rich Low_complexity Low_complexity 1 22 0 9 1260 1158 122 0 0 chr17 88503297 88503477 -6769174 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1 1260 1136 57 0 7 chr17 88503477 88503612 -6769039 - B1_Mus1 SINE Alu -12 136 2 1 1260 1413 98 5 5 chr17 88503768 88503962 -6768689 + B2_Mm2 SINE B2 2 195 0 1 1260 614 256 62 91 chr17 88503974 88504249 -6768402 - Lx7 LINE L1 -281 7415 7149 1 1260 447 221 212 12 chr17 88504257 88504422 -6768229 - B3A SINE B2 0 198 1 1 1260 552 148 35 17 chr17 88504559 88504731 -6767920 + (TG)n Simple_repeat Simple_repeat 2 176 0 1 1260 680 128 18 37 chr17 88504787 88505305 -6767346 + (TG)n Simple_repeat Simple_repeat 1 507 0 1 1260 478 209 35 9 chr17 88505483 88505599 -6767052 - B1F2 SINE Alu -1 148 30 1 1260 182 37 0 36 chr17 88505601 88505629 -6767022 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1260 245 259 13 31 chr17 88505639 88505717 -6766934 + ID2 SINE ID 11 83 0 1 1260 188 313 182 41 chr17 88505914 88506277 -6766374 + L2 LINE L2 2578 2991 -428 1 1260 820 216 16 21 chr17 88506449 88506643 -6766008 + B3A SINE B2 4 196 -2 2 1260 247 315 183 21 chr17 88506664 88506883 -6765768 - L2a LINE L2 -63 3363 3103 2 1260 198 0 0 0 chr17 88506883 88506905 -6765746 + (TGG)n Simple_repeat Simple_repeat 3 24 0 2 1260 247 315 183 21 chr17 88506905 88506964 -6765687 - L2a LINE L2 -324 3102 3041 2 1260 681 76 0 0 chr17 88506997 88507102 -6765549 + (TCTCTG)n Simple_repeat Simple_repeat 4 108 0 2 1260 279 309 0 24 chr17 88507108 88507191 -6765460 - PB1D10 SINE Alu -6 111 31 2 1260 1005 206 5 0 chr17 88507952 88508146 -6764505 - B3 SINE B2 -17 199 5 2 1260 682 191 42 14 chr17 88508161 88508175 -6764476 - B1_Mus2 SINE Alu 0 147 136 2 1260 302 0 26 0 chr17 88508175 88508213 -6764438 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 2 1260 682 191 42 14 chr17 88508213 88508341 -6764310 - B1_Mus2 SINE Alu -12 135 2 2 1260 243 0 0 0 chr17 88508420 88508447 -6764204 + (TC)n Simple_repeat Simple_repeat 1 27 0 2 1260 180 0 0 0 chr17 88508447 88508466 -6764185 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 1260 1321 91 17 0 chr17 88508489 88508665 -6763986 + B2_Mm1t SINE B2 1 179 -14 3 1260 333 81 348 18 chr17 88508716 88508828 -6763823 + B2_Mm2 SINE B2 47 195 0 3 1260 561 72 0 0 chr17 88508860 88508943 -6763708 + (TG)n Simple_repeat Simple_repeat 2 84 0 3 1260 506 299 16 0 chr17 88508945 88509072 -6763579 - RSINE1 SINE B4 -34 131 3 3 1260 316 200 62 0 chr17 88509230 88509295 -6763356 - B1F SINE Alu -13 136 68 3 1260 670 201 29 147 chr17 88509335 88509488 -6763163 + ORR1C1 LTR MaLR 1 142 -236 3 1260 1389 73 0 6 chr17 88509488 88509666 -6762985 - B2_Mm2 SINE B2 -14 181 5 3 1260 670 201 29 147 chr17 88509666 88509716 -6762935 + ORR1C1 LTR MaLR 143 180 -198 3 1260 858 119 6 25 chr17 88509717 88509880 -6762771 + CT-rich Low_complexity Low_complexity 3 162 0 3 1260 403 60 15 15 chr17 88509888 88509956 -6762695 + (TCCC)n Simple_repeat Simple_repeat 1 68 0 3 1260 434 236 211 6 chr17 88509966 88510132 -6762519 + ORR1C1 LTR MaLR 185 384 0 3 1260 848 217 54 29 chr17 88510176 88510380 -6762271 - B3 SINE B2 -7 209 1 3 1260 195 42 0 0 chr17 88510448 88510472 -6762179 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1260 228 122 0 0 chr17 88510907 88510948 -6761703 + (A)n Simple_repeat Simple_repeat 1 41 0 4 1260 936 133 0 26 chr17 88511063 88511217 -6761434 + B1_Mur4 SINE Alu 1 150 0 4 1260 289 310 130 19 chr17 88511603 88511810 -6760841 - RMER15 LTR ERVL -9 566 337 4 1260 341 276 100 65 chr17 88512690 88512919 -6759732 + L1M5 LINE L1 4996 5232 -914 4 1260 451 305 128 0 chr17 88513038 88513241 -6759410 + L1M5 LINE L1 5457 5685 -477 4 1260 22 35 0 0 chr17 88513499 88513528 -6759123 + AT_rich Low_complexity Low_complexity 1 29 0 4 1260 521 180 19 48 chr17 88513613 88513718 -6758933 + B1_Mm SINE Alu 14 115 -32 4 1260 23 0 0 0 chr17 88513784 88513807 -6758844 + AT_rich Low_complexity Low_complexity 1 23 0 4 1260 423 0 0 0 chr17 88513904 88513951 -6758700 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1260 831 293 105 0 chr17 88514245 88514484 -6758167 - B4A SINE B4 -3 289 26 4 1260 1573 176 142 9 chr17 88514507 88514846 -6757805 - ORR1C2 LTR MaLR 0 384 1 5 1260 411 98 0 0 chr17 88514917 88514978 -6757673 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 1260 486 49 0 0 chr17 88515008 88515069 -6757582 + (TTCC)n Simple_repeat Simple_repeat 3 63 0 5 1260 1178 75 0 0 chr17 88515070 88515217 -6757434 - B1_Mus2 SINE Alu 0 147 1 5 1260 243 114 0 0 chr17 88515223 88515267 -6757384 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 5 1260 326 284 49 0 chr17 88515441 88515522 -6757129 - RSINE1 SINE B4 -16 149 65 5 1260 267 293 101 0 chr17 88515684 88515783 -6756868 - PB1D10 SINE Alu -6 111 3 5 1260 264 243 29 7 chr17 88515850 88515874 -6756777 + ORR1B1-int LTR MaLR 615 638 -871 5 1260 633 149 116 29 chr17 88515874 88516012 -6756639 + B1_Mur4 SINE Alu 1 150 0 5 1260 264 243 29 7 chr17 88516012 88516124 -6756527 + ORR1B1-int LTR MaLR 639 754 -755 5 1260 1057 36 0 0 chr17 88516025 88516164 -6756487 + B1_Mus1 SINE Alu 10 148 0 5 1260 21 0 0 0 chr17 88516164 88516185 -6756466 + AT_rich Low_complexity Low_complexity 1 21 0 6 1260 506 15 30 0 chr17 88516935 88517001 -6755650 + (GAAA)n Simple_repeat Simple_repeat 1 68 0 6 1260 200 184 20 0 chr17 88517486 88517535 -6755116 + (CATA)n Simple_repeat Simple_repeat 3 52 0 6 1260 189 107 0 0 chr17 88517579 88517607 -6755044 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 1260 636 270 96 5 chr17 88517803 88518000 -6754651 + B3 SINE B2 1 215 -1 6 1260 321 26 0 0 chr17 88518048 88518086 -6754565 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1260 215 350 85 8 chr17 88518093 88518211 -6754440 - RSINE1 SINE B4 -30 135 9 6 1260 621 217 7 40 chr17 88518423 88518572 -6754079 + ID_B1 SINE B4 81 224 0 6 1260 273 250 0 51 chr17 88518722 88518781 -6753870 - PB1D9 SINE Alu -64 56 1 6 1260 886 217 63 0 chr17 88518814 88519003 -6753648 + B3 SINE B2 8 208 -8 6 1260 1505 243 63 12 chr17 88519147 88519560 -6753091 - RCHARR1 DNA MER1_type -508 466 33 7 1260 423 0 0 0 chr17 88519563 88519610 -6753041 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 7 1260 1059 139 0 0 chr17 88519610 88519790 -6752861 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 1260 644 176 41 6 chr17 88519790 88519961 -6752690 + (TATATG)n Simple_repeat Simple_repeat 4 180 0 7 1260 1140 102 0 0 chr17 88520210 88520357 -6752294 + B1_Mus1 SINE Alu 2 148 0 7 1260 192 40 0 0 chr17 88520379 88520404 -6752247 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 7 1260 257 194 11 182 chr17 88520406 88520494 -6752157 - PB1D7 SINE Alu -18 102 30 7 1260 1514 68 5 0 chr17 88520654 88520846 -6751805 - B2_Mm1a SINE B2 0 193 1 7 1260 1564 138 97 83 chr17 88521274 88521623 -6751028 - ORR1B1 LTR MaLR 0 394 41 7 1260 288 232 76 51 chr17 88521669 88521787 -6750864 + MTEa LTR MaLR 206 326 -53 7 1260 925 148 143 0 chr17 88521791 88521980 -6750671 - B3 SINE B2 0 216 1 8 1260 517 241 53 0 chr17 88522838 88522971 -6749680 - ID_B1 SINE B4 -83 141 2 8 1260 216 0 0 0 chr17 88523087 88523111 -6749540 + (TCTG)n Simple_repeat Simple_repeat 2 25 0 8 1260 518 251 140 31 chr17 88523113 88523306 -6749345 + ORR1E LTR MaLR 4 217 -142 8 1260 284 102 0 20 chr17 88523392 88523430 -6749221 + (TC)n Simple_repeat Simple_repeat 1 38 0 8 1260 986 38 25 18 chr17 88523430 88523593 -6749058 + (TCTA)n Simple_repeat Simple_repeat 2 165 0 8 1260 284 102 0 20 chr17 88523593 88523604 -6749047 + (TC)n Simple_repeat Simple_repeat 2 12 0 8 1260 1348 77 11 21 chr17 88523741 88523927 -6748724 - B2_Mm1t SINE B2 -9 184 1 8 1260 958 82 0 0 chr17 88524209 88524343 -6748308 - B1_Mus1 SINE Alu 0 148 15 8 1260 521 235 5 107 chr17 88524343 88524371 -6748280 - ID_B1 SINE B4 0 195 73 8 1260 2240 161 96 84 chr17 88524371 88524894 -6747757 - RLTR24 LTR ERV1 0 529 1 9 1260 521 235 5 107 chr17 88524894 88524928 -6747723 - ID SINE ID -152 72 41 8 1260 710 229 54 6 chr17 88525005 88525172 -6747479 - B3 SINE B2 0 216 42 9 1260 353 239 0 11 chr17 88525220 88525309 -6747342 - B4A SINE B4 -204 88 1 9 1260 543 128 72 18 chr17 88525555 88525666 -6746985 - B1_Mus1 SINE Alu -1 147 31 9 1260 304 194 219 31 chr17 88526005 88526101 -6746550 - PB1D9 SINE Alu 0 120 7 9 1260 426 310 23 17 chr17 88526122 88526296 -6746355 - L1M4 LINE L1 -381 5797 5623 9 1260 641 228 37 56 chr17 88526299 88526513 -6746138 - RMER15 LTR ERVL -5 570 361 9 1260 180 0 0 0 chr17 88526592 88526612 -6746039 + (TGG)n Simple_repeat Simple_repeat 2 21 0 9 1260 288 293 20 28 chr17 88526685 88526807 -6745844 - L1M4 LINE L1 -547 5633 5512 9 1260 233 333 0 0 chr17 88526810 88526876 -6745775 + (TG)n Simple_repeat Simple_repeat 1 66 0 9 1260 188 0 0 69 chr17 88526888 88526917 -6745734 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 9 1260 1375 84 10 10 chr17 88526981 88527173 -6745478 + B2_Mm2 SINE B2 2 193 -2 1 1260 1856 95 32 22 chr17 88527339 88527650 -6745001 - ORR1A2 LTR MaLR -11 316 3 1 1260 270 0 0 0 chr17 88527660 88527690 -6744961 + (TC)n Simple_repeat Simple_repeat 2 31 0 1 1260 318 50 0 0 chr17 88527690 88527729 -6744922 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1260 216 67 0 0 chr17 88527775 88527805 -6744846 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1 1260 932 106 49 18 chr17 88527805 88527960 -6744691 - B2_Mm1a SINE B2 -32 161 2 1 1260 481 273 0 0 chr17 88527960 88528058 -6744593 - RSINE1 SINE B4 -67 98 1 1 1260 1707 161 46 0 chr17 88528294 88528618 -6744033 + ORR1C2 LTR MaLR 1 339 -45 1 1260 1558 223 77 37 chr17 88528640 88529096 -6743555 + RMER19C LTR ERVK 138 611 0 1 1260 266 125 21 0 chr17 88529098 88529146 -6743505 + ORR1C2 LTR MaLR 328 376 -2 1 1260 542 270 97 44 chr17 88529148 88529429 -6743222 - Lx7 LINE L1 -395 5905 5617 1 1260 231 154 0 0 chr17 88529456 88529495 -6743156 - Lx6 LINE L1 -1833 5627 5589 1 1260 1618 141 108 35 chr17 88529699 88530015 -6742636 + ORR1C1 LTR MaLR 1 339 -39 1 1260 261 157 78 0 chr17 88530539 88530590 -6742061 + ORR1C1 LTR MaLR 324 378 0 1 1260 923 126 137 12 chr17 88530799 88530960 -6741691 + B2_Mm2 SINE B2 1 181 -14 1 1260 407 58 343 46 chr17 88531019 88531127 -6741524 + B2_Mm2 SINE B2 47 186 -9 1 1260 843 153 0 0 chr17 88532831 88532968 -6739683 + B1_Mus2 SINE Alu 10 146 -1 1 1260 300 191 0 31 chr17 88533079 88533144 -6739507 - B1F SINE Alu -30 119 57 1 1260 269 214 0 0 chr17 88533134 88533190 -6739461 - ID_B1 SINE B4 -24 200 145 1 1260 290 192 0 0 chr17 88533166 88533218 -6739433 - B1F SINE Alu -30 119 68 1 1260 279 214 0 0 chr17 88533192 88533248 -6739403 - ID_B1 SINE B4 -24 200 145 1 1260 367 269 0 174 chr17 88533224 88533368 -6739283 - B1F1 SINE Alu -30 119 1 1 1260 595 248 8 0 chr17 88533250 88533371 -6739280 - ID_B1 SINE B4 -24 200 79 1 1260 23 0 0 0 chr17 88533607 88533630 -6739021 + AT_rich Low_complexity Low_complexity 1 23 0 1 1260 385 325 94 82 chr17 88533774 88534126 -6738525 - ORR1E LTR MaLR 0 359 4 1 1260 336 234 13 0 chr17 88534215 88534292 -6738359 + PB1D10 SINE Alu 38 115 -2 1 1260 706 227 0 14 chr17 88534298 88534441 -6738210 + RSINE1 SINE B4 3 143 -22 1 1260 1285 111 11 0 chr17 88534569 88534758 -6737893 - B2_Mm1t SINE B2 0 193 3 1 1260 3071 61 20 0 chr17 88534774 88535166 -6737485 - MTB LTR MaLR 0 400 1 1 1260 940 17 17 0 chr17 88535309 88535427 -6737224 + (GA)n Simple_repeat Simple_repeat 1 120 0 1 1260 357 276 0 0 chr17 88536061 88536184 -6736467 + (TG)n Simple_repeat Simple_repeat 1 123 0 1 1260 375 265 265 64 chr17 88536192 88536426 -6736225 - B4A SINE B4 0 292 12 1 1260 270 265 0 14 chr17 88536698 88536767 -6735884 - ID_B1 SINE B4 -15 209 142 1 1260 447 308 16 77 chr17 88536884 88537067 -6735584 - B4 SINE B4 -120 172 1 1 1260 794 319 5 0 chr17 88537073 88537289 -6735362 - ID_B1 SINE B4 -6 218 2 1 1260 861 168 0 20 chr17 88537352 88537498 -6735153 - B1_Mur4 SINE Alu 0 150 8 1 1260 370 260 0 0 chr17 88538447 88538543 -6734108 - ID_B1 SINE B4 -33 191 96 1 1260 305 321 0 74 chr17 88538718 88539086 -6733565 + (CA)n Simple_repeat Simple_repeat 1 340 0 1 1260 725 291 0 0 chr17 88539487 88539669 -6732982 + B3A SINE B2 1 182 -16 1 1260 570 109 47 0 chr17 88539693 88539821 -6732830 + (CA)n Simple_repeat Simple_repeat 2 135 0 1 1260 701 191 0 0 chr17 88539821 88539947 -6732704 + B1_Mm SINE Alu 1 126 -21 1 1260 1098 89 0 14 chr17 88540635 88540783 -6731868 - B1_Mus2 SINE Alu 0 147 2 1 1260 546 245 39 74 chr17 88540821 88540990 -6731661 - B3A SINE B2 -14 202 14 1 1260 793 262 46 78 chr17 88541322 88541758 -6730893 + MT2B LTR ERVL 7 509 -92 1 1260 935 157 13 13 chr17 88541929 88542078 -6730573 + B1_Mur4 SINE Alu 1 149 -1 1 1260 390 268 73 0 chr17 88542171 88542294 -6730357 - B1F1 SINE Alu -16 133 2 1 1260 349 224 5 48 chr17 88542428 88542616 -6730035 + CT-rich Low_complexity Low_complexity 1 180 0 1 1260 325 273 116 74 chr17 88543182 88543372 -6729279 + MIR SINE MIR 56 253 -9 1 1260 704 169 88 0 chr17 88543724 88543860 -6728791 + B1_Mus1 SINE Alu 1 148 0 1 1260 183 80 0 0 chr17 88544505 88544530 -6728121 + (TCTCCC)n Simple_repeat Simple_repeat 4 28 0 1 1260 406 208 126 46 chr17 88544537 88544554 -6728097 - RSINE1 SINE B4 0 165 150 1 1260 1029 97 0 0 chr17 88544554 88544762 -6727889 + (TG)n Simple_repeat Simple_repeat 1 208 0 1 1260 406 208 126 46 chr17 88544762 88544893 -6727758 - RSINE1 SINE B4 -16 149 3 1 1260 259 274 155 21 chr17 88544894 88544991 -6727660 - PB1D7 SINE Alu -11 116 7 1 1260 353 149 15 0 chr17 88545182 88545249 -6727402 + CT-rich Low_complexity Low_complexity 1 68 0 1 1260 1050 224 5 5 chr17 88545437 88545652 -6726999 - B3 SINE B2 0 216 2 1 1260 424 298 52 6 chr17 88545930 88546206 -6726445 - MER63C DNA AcHobo -334 596 274 1 1260 340 315 121 15 chr17 88546502 88546840 -6725811 - L1M5 LINE L1 -961 5185 4812 1 1260 312 256 11 32 chr17 88547210 88547303 -6725348 + PB1D10 SINE Alu 1 91 -26 1 1260 209 33 33 0 chr17 88547304 88547334 -6725317 + (GGA)n Simple_repeat Simple_repeat 1 31 0 1 1260 3529 23 2 0 chr17 88547441 88547836 -6724815 - MTA_Mm LTR MaLR 0 396 1 1 1260 490 204 32 0 chr17 88547939 88548032 -6724619 - PB1D10 SINE Alu -21 96 1 1 1260 584 182 47 8 chr17 88548482 88548609 -6724042 - B1_Mur1 SINE Alu 0 149 18 1 1260 1001 26 0 0 chr17 88548611 88548724 -6723927 - L1Md_F3 LINE L1 -379 6203 6091 1 1260 3081 32 5 31 chr17 88548724 88549116 -6723535 + L1Md_F3 LINE L1 6203 6584 0 1 1260 294 50 0 0 chr17 88549213 88549253 -6723398 + (CCCCG)n Simple_repeat Simple_repeat 5 44 0 1 1260 186 133 0 0 chr17 88549656 88549686 -6722965 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 1 1260 333 281 96 7 chr17 88549897 88549922 -6722729 + B1F SINE Alu 1 99 -50 1 1260 468 210 30 10 chr17 88549922 88550023 -6722628 + ID_B1 SINE B4 107 209 -15 1 1260 186 133 0 0 chr17 88550342 88550372 -6722279 + (TTC)n Simple_repeat Simple_repeat 1 30 0 1 1260 578 141 0 42 chr17 88550502 88550598 -6722053 + PB1D10 SINE Alu 21 112 -5 1 1260 263 224 0 54 chr17 88550671 88550771 -6721880 - L1MB7 LINE L1 -209 5965 5879 1 1260 1610 52 0 0 chr17 88550831 88551024 -6721627 - B2_Mm1t SINE B2 0 193 1 1 1260 25 31 0 0 chr17 88551029 88551061 -6721590 + AT_rich Low_complexity Low_complexity 1 32 0 1 1260 229 382 59 16 chr17 88551261 88551447 -6721204 - L1MD3 LINE L1 -1135 6860 6667 1 1260 716 161 25 123 chr17 88551475 88551638 -6721013 - B1_Mur2 SINE Alu -2 147 1 1 1260 192 96 37 37 chr17 88551681 88551735 -6720916 + T-rich Low_complexity Low_complexity 2 55 0 1 1260 645 322 87 37 chr17 88551981 88552148 -6720503 + Charlie1a DNA MER1_type 590 747 -708 1 1260 1658 31 0 0 chr17 88552148 88552339 -6720312 - B2_Mm1a SINE B2 -2 191 1 1 1260 645 322 87 37 chr17 88552339 88552606 -6720045 + Charlie1a DNA MER1_type 748 1046 -409 1 1260 242 361 0 0 chr17 88552604 88552676 -6719975 + U6 snRNA snRNA 31 102 -5 1 1260 229 372 0 0 chr17 88552682 88552768 -6719883 + L1MC1 LINE L1 6227 6312 -21 1 1260 1277 118 11 0 chr17 88552817 88553003 -6719648 + B2_Mm1t SINE B2 1 188 -5 1 1260 477 278 102 28 chr17 88553018 88553273 -6719378 + Charlie1a DNA MER1_type 1046 1319 -136 1 1260 722 263 41 27 chr17 88553349 88553568 -6719083 + ID_B1 SINE B4 2 223 -1 1 1260 678 232 40 0 chr17 88553651 88553828 -6718823 - B3 SINE B2 -5 211 28 1 1260 312 326 53 25 chr17 88554486 88554790 -6717861 + L1M2 LINE L1 4909 5222 -924 1 1260 868 104 21 7 chr17 88554836 88554981 -6717670 + B2_Mm1t SINE B2 34 180 -13 1 1260 279 81 360 52 chr17 88555020 88555134 -6717517 + B2_Mm2 SINE B2 45 193 -2 1 1260 250 196 20 0 chr17 88555505 88555556 -6717095 + B3A SINE B2 68 119 -79 1 1260 2202 131 81 3 chr17 88555567 88555950 -6716701 - MTC LTR MaLR -8 413 1 1 1260 367 255 10 50 chr17 88555951 88556050 -6716601 + B3 SINE B2 117 211 -5 1 1260 1660 153 44 52 chr17 88556247 88556576 -6716075 - ORR1B1 LTR MaLR -2 392 1 1 1260 341 250 70 101 chr17 88556677 88556690 -6715961 + MT2B LTR ERVL 154 162 -439 1 1260 553 254 32 8 chr17 88556690 88556813 -6715838 + B1_Mur1 SINE Alu 3 128 -21 1 1260 841 97 58 22 chr17 88557140 88557277 -6715374 + B1_Mur2 SINE Alu 1 142 -7 1 1260 208 143 0 0 chr17 88557284 88557319 -6715332 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1 1260 396 0 0 0 chr17 88557840 88557884 -6714767 + (TC)n Simple_repeat Simple_repeat 2 45 0 1 1260 591 112 9 18 chr17 88557884 88557993 -6714658 + (TTCC)n Simple_repeat Simple_repeat 2 109 0 1 1260 662 227 40 17 chr17 88557994 88558169 -6714482 - RMER10A LTR ERVL -45 397 219 1 1260 257 70 47 0 chr17 88558231 88558274 -6714377 + (TTTC)n Simple_repeat Simple_repeat 1 45 0 1 1260 371 274 62 39 chr17 88558337 88558466 -6714185 - B1F1 SINE Alu 0 149 18 1 1260 285 345 35 0 chr17 88558629 88558742 -6713909 + MamRep4096 DNA hAT? 281 397 -29 1 1260 1953 147 30 81 chr17 88559509 88559916 -6712735 + RLTR41 LTR ERV1 60 445 -1 1 1260 258 364 15 20 chr17 88560490 88560692 -6711959 + RLTR6-int LTR ERV1 582 782 -6819 1 1260 460 306 132 12 chr17 88561142 88561400 -6711251 + RLTR6-int LTR ERV1 1543 1831 -5947 1 1260 1877 249 49 17 chr17 88561750 88562223 -6710428 + MuRRS4-int LTR ERV1 3533 4020 -1043 1 1260 335 320 82 7 chr17 88563097 88563305 -6709346 + MuRRS4-int LTR ERV1 4713 4889 -174 1 1260 1253 191 286 9 chr17 88563399 88563748 -6708903 + RLTR41 LTR ERV1 1 446 0 1 1260 240 188 0 40 chr17 88563855 88563905 -6708746 + (CATA)n Simple_repeat Simple_repeat 4 51 0 2 1260 227 238 0 0 chr17 88564583 88564625 -6708026 + (CGG)n Simple_repeat Simple_repeat 1 42 0 2 1260 418 174 136 16 chr17 88564816 88564961 -6707690 + URR1A DNA MER1_type 34 224 -2 2 1260 274 224 118 39 chr17 88564871 88564973 -6707678 - CYRA11_Mm Unknown Y-chromosome -346 271 162 2 1260 522 0 0 0 chr17 88565187 88565245 -6707406 + (GA)n Simple_repeat Simple_repeat 1 58 0 2 1260 1370 82 11 0 chr17 88565698 88565881 -6706770 - B2_Mm1t SINE B2 -8 185 1 2 1260 726 250 5 43 chr17 88565986 88566174 -6706477 - B3A SINE B2 -16 182 2 2 1260 717 252 206 47 chr17 88566187 88566567 -6706084 - L1MB8 LINE L1 -312 5866 5427 2 1260 1460 113 104 41 chr17 88566672 88566940 -6705711 - RMER1B Other Other -6 1060 776 2 1260 693 204 38 8 chr17 88566985 88567118 -6705533 - B1_Mur2 SINE Alu -8 141 5 2 1260 717 257 16 38 chr17 88567151 88567337 -6705314 - B3A SINE B2 -16 182 1 2 1260 355 360 88 21 chr17 88567557 88567795 -6704856 + MIRb SINE MIR 7 260 -8 2 1260 751 164 212 0 chr17 88568457 88568603 -6704048 + URR1B DNA MER1_type 1 177 -48 2 1260 729 171 108 0 chr17 88568911 88569040 -6703611 + B1_Mur2 SINE Alu 2 144 -5 2 1260 308 211 0 17 chr17 88569350 88569408 -6703243 - ID_B1 SINE B4 0 224 168 2 1260 1409 210 46 136 chr17 88569729 88570142 -6702509 + RLTR41 LTR ERV1 1 376 -70 2 1260 22 70 0 0 chr17 88570165 88570208 -6702443 + AT_rich Low_complexity Low_complexity 1 43 0 2 1260 1740 61 0 38 chr17 88570492 88570731 -6701920 + L1_Mus1 LINE L1 6337 6566 -1 2 1260 396 0 0 0 chr17 88570736 88570780 -6701871 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 2 1260 1726 226 35 154 chr17 88570788 88571358 -6701293 + RMER19C LTR ERVK 108 609 -2 2 1260 327 207 65 118 chr17 88571365 88571518 -6701133 - L1_Mur3 LINE L1 -609 5271 5127 2 1260 262 344 41 8 chr17 88571516 88571639 -6701012 + Lx8 LINE L1 7212 7338 -135 2 1260 21 0 0 0 chr17 88571832 88571853 -6700798 + AT_rich Low_complexity Low_complexity 1 21 0 2 1260 2196 39 0 0 chr17 88571853 88572111 -6700540 - L1Md_F2 LINE L1 -14 6568 6311 2 1260 578 73 0 47 chr17 88572111 88572197 -6700454 + RLTR41 LTR ERV1 365 446 0 2 1260 603 174 0 0 chr17 88572428 88572577 -6700074 + (CA)n Simple_repeat Simple_repeat 1 149 0 2 1260 518 0 16 0 chr17 88572634 88572696 -6699955 + (TC)n Simple_repeat Simple_repeat 2 64 0 2 1260 538 327 37 42 chr17 88572795 88572989 -6699662 + B3A SINE B2 22 216 0 2 1260 297 0 0 0 chr17 88573497 88573530 -6699121 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1260 306 0 0 0 chr17 88573530 88573563 -6699088 + (GA)n Simple_repeat Simple_repeat 1 34 0 2 1260 584 314 10 26 chr17 88574545 88574738 -6697913 + B3A SINE B2 7 196 -2 2 1260 3812 178 126 32 chr17 88574755 88575563 -6697088 + Lx5 LINE L1 6167 7050 0 2 1260 221 0 0 33 chr17 88575599 88575629 -6697022 + (CCAA)n Simple_repeat Simple_repeat 1 29 0 2 1260 833 93 18 18 chr17 88576112 88576391 -6696260 + (TCTA)n Simple_repeat Simple_repeat 1 278 0 2 1260 739 167 0 0 chr17 88576391 88576505 -6696146 - B1_Mus1 SINE Alu -14 134 21 2 1260 312 305 84 68 chr17 88576579 88576769 -6695882 + ORR1E LTR MaLR 3 195 -164 2 1260 6478 62 46 26 chr17 88576800 88577098 -6695553 - L1VL2 LINE L1 -2493 1122 812 2 1260 864 20 0 0 chr17 88577098 88577200 -6695451 + (TTTC)n Simple_repeat Simple_repeat 3 104 0 2 1260 6478 81 19 83 chr17 88577200 88577227 -6695424 - L1VL2 LINE L1 -5524 811 787 2 1260 228 93 0 44 chr17 88577227 88577272 -6695379 - B1_Mus2 SINE Alu 0 147 105 2 1260 6478 81 19 83 chr17 88577272 88578017 -6694634 - L1VL2 LINE L1 -5524 786 73 2 1260 2007 226 67 41 chr17 88578019 88578036 -6694615 - RMER1B Other Other -101 965 949 2 1260 2461 138 23 0 chr17 88578036 88578420 -6694231 - ORR1B1 LTR MaLR -1 393 1 2 1260 2007 227 68 44 chr17 88578420 88578990 -6693661 - RMER1B Other Other -118 948 191 2 1260 394 229 58 204 chr17 88578990 88579215 -6693436 - MTEa LTR MaLR -186 193 2 2 1260 401 260 43 9 chr17 88579226 88579406 -6693245 - L1M4b LINE L1 -3537 3469 3281 2 1260 279 122 0 0 chr17 88579409 88579458 -6693193 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1260 313 312 134 26 chr17 88579706 88579900 -6692751 - L1M4b LINE L1 -4292 2810 2596 2 1260 753 147 0 146 chr17 88579982 88580133 -6692518 - B3 SINE B2 -86 130 2 2 1260 425 256 58 13 chr17 88580248 88580402 -6692249 - L1M4b LINE L1 -4891 2443 2283 2 1260 576 42 0 0 chr17 88580412 88580483 -6692168 + (TTCC)n Simple_repeat Simple_repeat 2 72 0 2 1260 1142 35 7 0 chr17 88580483 88580625 -6692026 + (TTTCC)n Simple_repeat Simple_repeat 3 146 0 2 1260 322 189 275 11 chr17 88580638 88580729 -6691922 - PB1D9 SINE Alu -5 115 1 2 1260 1078 46 0 0 chr17 88581051 88581182 -6691469 - B1_Mus1 SINE Alu 0 148 18 2 1260 732 214 20 41 chr17 88581729 88581875 -6690776 - B1_Mur1 SINE Alu -5 144 2 2 1260 315 261 101 39 chr17 88581958 88582165 -6690486 - L1M4b LINE L1 -5040 1969 1750 2 1260 313 157 0 0 chr17 88582169 88582220 -6690431 + Lx7 LINE L1 7267 7317 -379 2 1260 23 0 0 0 chr17 88582417 88582440 -6690211 + AT_rich Low_complexity Low_complexity 1 23 0 2 1260 4988 65 12 17 chr17 88582477 88583120 -6689531 - L1_Mus2 LINE L1 0 6566 5927 2 1260 9512 90 21 12 chr17 88583120 88584643 -6688008 - L1Md_F LINE L1 -1303 2514 984 2 1260 1129 95 0 0 chr17 88584643 88584790 -6687861 + B1_Mus1 SINE Alu 2 148 0 2 1260 3022 141 61 90 chr17 88584790 88585291 -6687360 - L1Md_F LINE L1 -5536 983 491 2 1260 240 283 0 0 chr17 88585399 88585452 -6687199 + ID_B1 SINE B4 107 159 -65 2 1260 212 302 41 113 chr17 88585452 88585496 -6687155 + PB1D10 SINE Alu 26 115 -2 2 1260 359 328 71 53 chr17 88586098 88586420 -6686231 - L1M4b LINE L1 -5549 1538 1211 2 1260 321 277 38 84 chr17 88586640 88586853 -6685798 - L1M4b LINE L1 -6159 928 726 2 1260 588 95 0 0 chr17 88587035 88587119 -6685532 + (GA)n Simple_repeat Simple_repeat 2 85 0 2 1260 2004 194 13 18 chr17 88587338 88587736 -6684915 + MTD LTR MaLR 12 407 -12 2 1260 354 80 0 0 chr17 88588142 88588192 -6684459 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1260 587 228 140 0 chr17 88588194 88588234 -6684417 - B3A SINE B2 -42 156 117 2 1260 792 0 0 0 chr17 88588234 88588322 -6684329 + (CTGGGG)n Simple_repeat Simple_repeat 3 90 0 2 1260 587 228 140 0 chr17 88588322 88588417 -6684234 - B3A SINE B2 -82 116 4 2 1260 1781 167 99 20 chr17 88588605 88588947 -6683704 - MTC LTR MaLR -52 369 1 2 1260 1561 145 19 4 chr17 88589009 88589265 -6683386 - Lx4A LINE L1 0 7058 6799 2 1260 254 277 30 15 chr17 88589535 88589601 -6683050 - MLT1C LTR MaLR -158 309 243 2 1260 483 73 0 0 chr17 88589618 88589686 -6682965 + (TC)n Simple_repeat Simple_repeat 2 69 0 2 1260 230 314 46 11 chr17 88589698 88589785 -6682866 - ORR1E LTR MaLR 0 359 270 2 1260 553 209 0 9 chr17 88589814 88589920 -6682731 + B1_Mur4 SINE Alu 45 149 -1 2 1260 396 0 0 0 chr17 88589979 88590023 -6682628 + (GA)n Simple_repeat Simple_repeat 1 44 0 2 1260 183 80 0 0 chr17 88590633 88590658 -6681993 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 2 1260 560 305 7 7 chr17 88590681 88590836 -6681815 - RSINE1 SINE B4 -9 156 2 2 1260 1078 181 147 16 chr17 88591313 88591565 -6681086 + ORR1C2 LTR MaLR 1 285 -99 2 1260 926 218 35 42 chr17 88591565 88592010 -6680641 + RLTR16 LTR ERVK 1 484 -21 2 1260 542 165 10 40 chr17 88592064 88592165 -6680486 + ORR1C2 LTR MaLR 287 384 0 2 1260 459 0 0 0 chr17 88592207 88592258 -6680393 + (GA)n Simple_repeat Simple_repeat 2 52 0 2 1260 346 315 27 0 chr17 88592462 88592573 -6680078 + PB1D7 SINE Alu 6 119 -1 2 1260 513 276 73 22 chr17 88592575 88592712 -6679939 + ID_B1 SINE B4 8 151 -73 2 1260 1217 55 0 0 chr17 88592792 88592937 -6679714 + B1_Mus2 SINE Alu 2 146 -1 2 1260 377 267 0 0 chr17 88593311 88593397 -6679254 - B3 SINE B2 -123 93 8 2 1260 455 224 18 45 chr17 88593398 88593510 -6679141 - PB1D10 SINE Alu 0 117 9 2 1260 691 311 78 18 chr17 88593601 88593882 -6678769 + MLT1F2 LTR MaLR 252 549 -11 2 1260 561 316 82 30 chr17 88593893 88594125 -6678526 + ERVL-B4-int LTR ERVL 2047 2290 -3424 2 1260 314 239 30 0 chr17 88594168 88594235 -6678416 + ERVL-B4-int LTR ERVL 2401 2469 -3245 2 1260 1812 304 71 27 chr17 88594316 88595094 -6677557 + ERVL-B4-int LTR ERVL 2609 3420 -2294 2 1260 924 310 80 26 chr17 88595220 88595760 -6676891 + ERVL-B4-int LTR ERVL 3656 4224 -1533 2 1260 288 0 0 0 chr17 88595841 88595873 -6676778 + (T)n Simple_repeat Simple_repeat 1 32 0 2 1260 270 269 26 0 chr17 88595930 88596008 -6676643 + ERVL-B4-int LTR ERVL 4389 4468 -1199 2 1260 409 276 12 0 chr17 88596187 88596357 -6676294 + (TAGA)n Simple_repeat Simple_repeat 3 174 0 2 1260 824 268 39 0 chr17 88596410 88596589 -6676062 + B3 SINE B2 1 186 -30 2 1260 183 80 0 0 chr17 88596609 88596634 -6676017 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1260 330 217 85 21 chr17 88596649 88596743 -6675908 - B3 SINE B2 -4 212 113 2 1260 535 245 77 0 chr17 88596837 88596980 -6675671 - ERVL-E-int LTR ERVL -743 4924 4771 2 1260 831 179 0 21 chr17 88597094 88597237 -6675414 + B1_Mur3 SINE Alu 9 148 -1 2 1260 246 179 0 0 chr17 88597237 88597293 -6675358 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 2 1260 183 80 0 0 chr17 88597431 88597456 -6675195 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 2 1260 1044 123 205 0 chr17 88597457 88597628 -6675023 - B3 SINE B2 -9 207 2 2 1260 22 70 0 0 chr17 88597738 88597781 -6674870 + AT_rich Low_complexity Low_complexity 1 43 0 2 1260 222 152 21 21 chr17 88597835 88597882 -6674769 + B3A SINE B2 1 47 -151 2 1260 694 265 105 5 chr17 88597969 88598159 -6674492 + MER58A DNA MER1_type 1 209 -15 2 1260 740 265 329 14 chr17 88598307 88598751 -6673900 + MLT2F LTR ERVL 3 586 -77 2 1260 392 150 12 0 chr17 88598768 88598848 -6673803 + (TG)n Simple_repeat Simple_repeat 2 82 0 2 1260 368 200 10 72 chr17 88598940 88598957 -6673694 + PB1D10 SINE Alu 1 16 -101 2 1260 1832 187 16 31 chr17 88598957 88599343 -6673308 - RLTR14 LTR ERV1 -2 380 1 2 1260 368 200 10 72 chr17 88599343 88599422 -6673229 + PB1D10 SINE Alu 17 91 -26 2 1260 270 81 0 0 chr17 88599428 88599465 -6673186 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 1260 575 299 12 55 chr17 88599507 88599670 -6672981 - RSINE1 SINE B4 -4 161 6 2 1260 440 270 9 0 chr17 88599743 88599851 -6672800 + B3A SINE B2 1 109 -89 3 1260 1646 151 126 113 chr17 88599851 88600240 -6672411 - ORR1B1 LTR MaLR 0 394 1 3 1260 207 114 0 0 chr17 88600248 88600283 -6672368 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1260 299 285 127 46 chr17 88600283 88600338 -6672313 + B2_Mm2 SINE B2 133 186 -9 3 1260 454 322 169 39 chr17 88600342 88600649 -6672002 - L1M5 LINE L1 -3403 2743 2397 3 1260 307 194 42 0 chr17 88600891 88600963 -6671688 + ID4 SINE ID 1 75 -8 3 1260 267 349 22 29 chr17 88601566 88601701 -6670950 - MIR3 SINE MIR -22 186 57 3 1260 2182 92 34 16 chr17 88601802 88602123 -6670528 + ORR1A4 LTR MaLR 3 329 0 3 1260 11130 123 27 111 chr17 88602123 88604265 -6668386 + ORR1A4-int LTR MaLR 1 1963 0 3 1260 2069 98 74 13 chr17 88604265 88604575 -6668076 + ORR1A4 LTR MaLR 1 329 0 3 1261 231 36 0 0 chr17 88605495 88605523 -6667128 + (TTG)n Simple_repeat Simple_repeat 3 30 0 3 1261 296 83 0 20 chr17 88605523 88605572 -6667079 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1261 230 209 0 0 chr17 88605573 88605616 -6667035 - RSINE1 SINE B4 -15 150 108 3 1261 242 333 0 0 chr17 88605621 88605684 -6666967 + Tigger7 DNA MER2_type 2419 2481 -10 3 1261 266 93 37 0 chr17 88606299 88606353 -6666298 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 3 1261 662 143 0 8 chr17 88606540 88606660 -6665991 + GA-rich Low_complexity Low_complexity 3 121 0 3 1261 684 163 15 37 chr17 88606698 88606832 -6665819 + B1_Mur1 SINE Alu 18 148 -1 3 1261 1141 186 19 5 chr17 88606847 88607052 -6665599 + B3 SINE B2 3 210 -6 3 1261 5459 25 8 3 chr17 88607537 88608171 -6664480 + L1Md_F3 LINE L1 5947 6583 -1 3 1261 1033 267 164 0 chr17 88608379 88608690 -6663961 - ORR1D2 LTR MaLR -8 362 1 3 1261 2235 135 44 23 chr17 88608965 88609351 -6663300 + ORR1B1 LTR MaLR 1 394 0 3 1261 2490 86 12 0 chr17 88609375 88609700 -6662951 - ORR1A4 LTR MaLR 0 329 1 3 1261 1082 229 154 22 chr17 88610099 88610469 -6662182 + MTD LTR MaLR 1 419 0 3 1261 1015 157 115 10 chr17 88612312 88612512 -6660139 + URR1A DNA MER1_type 1 221 -5 3 1261 468 328 43 43 chr17 88613228 88613486 -6659165 - MLT1H1 LTR MaLR -6 549 292 3 1261 345 278 58 0 chr17 88613543 88613673 -6658978 - MLT1H1 LTR MaLR -425 166 18 3 1261 23 0 0 0 chr17 88614057 88614080 -6658571 + AT_rich Low_complexity Low_complexity 1 23 0 3 1261 208 348 93 25 chr17 88614178 88614296 -6658355 - MIRb SINE MIR -122 146 21 3 1261 238 234 31 46 chr17 88615676 88615806 -6656845 + (CA)n Simple_repeat Simple_repeat 1 128 0 3 1261 1369 105 11 0 chr17 88615893 88616083 -6656568 - B2_Mm1t SINE B2 0 193 2 3 1261 1563 148 188 6 chr17 88617013 88617333 -6655318 + ORR1C1 LTR MaLR 1 378 0 3 1261 389 310 126 25 chr17 88617381 88617619 -6655032 + L1M5 LINE L1 3693 3954 -2192 3 1261 233 381 18 12 chr17 88617632 88617802 -6654849 - MIR SINE MIR -10 252 82 3 1261 1341 74 0 44 chr17 88617971 88618132 -6654519 + B2_Mm2 SINE B2 2 161 -34 3 1261 405 0 0 0 chr17 88618132 88618177 -6654474 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 3 1261 1341 74 0 44 chr17 88618177 88618198 -6654453 + B2_Mm2 SINE B2 162 176 -19 3 1261 826 127 15 7 chr17 88618207 88618342 -6654309 + B1_Mus2 SINE Alu 9 144 -3 3 1261 288 284 3 0 chr17 88618448 88618535 -6654116 - AluG_3 SINE Alu -97 214 140 3 1261 240 241 81 35 chr17 88618823 88618909 -6653742 - ORR1E LTR MaLR 0 359 270 3 1261 244 289 11 32 chr17 88619016 88619109 -6653542 + GA-rich Low_complexity Low_complexity 3 93 0 3 1261 246 274 0 0 chr17 88619048 88619099 -6653552 + G-rich Low_complexity Low_complexity 3 53 0 3 1261 3258 58 0 17 chr17 88619339 88619742 -6652909 + MTA_Mm LTR MaLR 1 396 0 3 1261 954 0 0 0 chr17 88619903 88620009 -6652642 + (TG)n Simple_repeat Simple_repeat 1 106 0 3 1261 248 240 0 0 chr17 88620009 88620059 -6652592 - ID4 SINE ID -19 64 15 3 1261 1467 195 98 15 chr17 88620062 88620400 -6652251 + ORR1D2 LTR MaLR 5 370 0 3 1261 394 344 106 48 chr17 88620625 88620765 -6651886 + Tigger15a DNA TcMar 252 400 -315 3 1261 189 0 0 0 chr17 88620765 88620786 -6651865 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1261 394 344 106 48 chr17 88620786 88621079 -6651572 + Tigger15a DNA TcMar 401 710 -5 3 1261 225 0 0 0 chr17 88621195 88621220 -6651431 + (TGGGGG)n Simple_repeat Simple_repeat 5 29 0 3 1261 868 126 31 68 chr17 88621465 88621627 -6651024 + B2_Mm2 SINE B2 3 158 -37 3 1261 207 0 0 0 chr17 88621628 88621651 -6651000 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1261 467 225 26 26 chr17 88622686 88622800 -6649851 - MLT1A1 LTR MaLR 0 408 295 3 1261 208 321 0 24 chr17 88622819 88622902 -6649749 + G-rich Low_complexity Low_complexity 3 83 0 3 1261 243 337 0 19 chr17 88622976 88623082 -6649569 - MLT1A1 LTR MaLR -274 134 31 3 1261 444 264 9 0 chr17 88623250 88623356 -6649295 - PB1D10 SINE Alu -1 116 10 3 1261 406 322 56 33 chr17 88623667 88623969 -6648682 + L1M2 LINE L1 2669 2977 -2870 3 1261 23 0 0 0 chr17 88623988 88624011 -6648640 + AT_rich Low_complexity Low_complexity 1 23 0 3 1261 244 174 43 14 chr17 88624049 88624119 -6648532 + (TA)n Simple_repeat Simple_repeat 1 72 0 3 1261 472 350 88 64 chr17 88624188 88624484 -6648167 - Lx8 LINE L1 -115 7358 7056 3 1261 2557 176 96 58 chr17 88624527 88624703 -6647948 - RMER6C LTR ERVK 0 720 521 3 1261 2094 143 64 67 chr17 88624703 88625093 -6647558 - ORR1B1 LTR MaLR -3 391 3 3 1261 2924 149 67 70 chr17 88625093 88625729 -6646922 - RMER6C LTR ERVK -38 652 5 3 1261 646 156 103 32 chr17 88625730 88625856 -6646795 - RMER6-int LTR ERVK -10 3167 3033 3 1261 729 166 7 21 chr17 88625861 88626003 -6646648 - RMER6-int LTR ERVK -403 2774 2635 3 1261 2591 221 67 112 chr17 88626695 88627587 -6645064 + MYSERV16_I-int LTR ERVK 2 1393 -1449 3 1261 1389 61 0 0 chr17 88627587 88627767 -6644884 + (TTC)n Simple_repeat Simple_repeat 1 180 0 3 1261 2591 215 77 124 chr17 88627767 88627780 -6644871 + MYSERV16_I-int LTR ERVK 724 724 -1602 3 1261 1170 90 0 0 chr17 88627780 88627958 -6644693 + (TTC)n Simple_repeat Simple_repeat 2 179 0 3 1261 1057 93 0 0 chr17 88627958 88628098 -6644553 - B1_Mus1 SINE Alu -7 141 2 3 1261 2591 215 77 124 chr17 88628098 88628343 -6644308 + MYSERV16_I-int LTR ERVK 724 961 -1365 3 1261 4220 171 70 53 chr17 88628373 88628835 -6643816 + MYSERV16_I-int LTR ERVK 1169 1649 -677 3 1261 1145 82 7 0 chr17 88628835 88628981 -6643670 + B1_Mm SINE Alu 1 147 0 3 1261 4220 171 70 53 chr17 88628981 88629636 -6643015 + MYSERV16_I-int LTR ERVK 1650 2305 -21 3 1261 511 268 83 66 chr17 88629667 88630082 -6642569 + RLTR20D LTR ERVK 1 562 -16 3 1261 293 245 5 10 chr17 88630423 88630523 -6642128 - Lx8 LINE L1 -1541 5932 5844 3 1261 1374 75 0 31 chr17 88630523 88630717 -6641934 - B2_Mm2 SINE B2 -7 188 1 3 1261 1769 212 14 60 chr17 88630754 88631186 -6641465 + MTD LTR MaLR 1 412 -7 3 1261 273 221 0 25 chr17 88631196 88631275 -6641376 - Lx8 LINE L1 -1679 5794 5718 3 1261 625 248 24 48 chr17 88631275 88631440 -6641211 - RSINE1 SINE B4 -1 164 4 3 1261 344 299 31 0 chr17 88631515 88631642 -6641009 + Lx7 LINE L1 3016 3146 -2997 3 1261 414 224 0 0 chr17 88631657 88631733 -6640918 + B1_Mur1 SINE Alu 65 140 -9 3 1261 382 200 0 39 chr17 88631771 88631875 -6640776 + L1M4 LINE L1 3190 3289 -2857 3 1261 643 271 24 52 chr17 88631882 88632092 -6640559 + B4A SINE B4 2 205 -87 3 1261 225 298 0 19 chr17 88632095 88632201 -6640450 + L1_Mur1 LINE L1 3311 3414 -2472 3 1261 276 30 0 0 chr17 88632256 88632289 -6640362 + (TTG)n Simple_repeat Simple_repeat 1 33 0 3 1261 680 143 95 0 chr17 88632290 88632416 -6640235 - B1_Mus1 SINE Alu -1 147 10 3 1261 1022 87 6 0 chr17 88632433 88632606 -6640045 + (GAA)n Simple_repeat Simple_repeat 1 174 0 3 1261 1774 310 50 25 chr17 88632618 88632771 -6639880 + Lx7 LINE L1 3526 3678 -2465 3 1261 261 0 0 0 chr17 88632771 88632800 -6639851 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 3 1261 1774 310 50 25 chr17 88632800 88633431 -6639220 + Lx7 LINE L1 3679 4328 -1815 3 1261 678 223 0 51 chr17 88633484 88633640 -6639011 + B1_Mur4 SINE Alu 1 148 -2 3 1261 528 274 53 44 chr17 88633673 88633898 -6638753 + Lx7 LINE L1 4362 4588 -1555 3 1261 494 224 142 97 chr17 88633907 88634183 -6638468 + Lx7 LINE L1 5638 5927 -1717 3 1261 327 261 91 0 chr17 88635731 88635819 -6636832 - B1F1 SINE Alu -53 96 1 3 1261 3833 49 7 94 chr17 88635869 88636430 -6636221 + RLTR1B LTR ERV1 1 512 0 3 1261 241 326 43 69 chr17 88636582 88636813 -6635838 + L1MCc LINE L1 663 887 -5536 3 1261 588 243 77 11 chr17 88636909 88637092 -6635559 + L1MCc LINE L1 1048 1242 -5181 3 1261 231 258 32 0 chr17 88637103 88637165 -6635486 + CT-rich Low_complexity Low_complexity 4 67 0 3 1261 629 199 20 75 chr17 88637166 88637313 -6635338 - B1F SINE Alu -6 143 5 3 1261 422 289 117 31 chr17 88637318 88637680 -6634971 + L1MCc LINE L1 1243 1714 -5414 3 1261 380 329 73 62 chr17 88637790 88638160 -6634491 + L1MCc LINE L1 1960 2333 -4704 3 1261 1070 274 10 56 chr17 88638285 88638525 -6634126 + B4A SINE B4 2 233 -59 3 1261 4005 111 103 24 chr17 88638525 88638966 -6633685 + RMER6A LTR ERVK 1 498 -258 3 1261 1026 88 0 0 chr17 88638966 88639126 -6633525 + (GA)n Simple_repeat Simple_repeat 1 160 0 3 1261 4005 111 103 24 chr17 88639126 88639385 -6633266 + RMER6A LTR ERVK 499 756 0 3 1261 1070 274 10 56 chr17 88639385 88639449 -6633202 + B4A SINE B4 234 292 0 3 1261 183 42 0 0 chr17 88639455 88639479 -6633172 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1261 398 290 99 0 chr17 88640491 88640622 -6632029 + B1_Mus1 SINE Alu 5 148 0 3 1261 187 103 0 49 chr17 88640707 88640748 -6631903 + (TAA)n Simple_repeat Simple_repeat 2 40 0 3 1261 2767 155 21 80 chr17 88640767 88641154 -6631497 + RLTR24 LTR ERV1 1 360 -169 3 1261 402 21 0 0 chr17 88641154 88641201 -6631450 + (TAAAA)n Simple_repeat Simple_repeat 2 48 0 3 1261 2767 155 21 80 chr17 88641201 88641373 -6631278 + RLTR24 LTR ERV1 361 527 -2 3 1261 620 280 6 18 chr17 88641886 88642053 -6630598 - B3A SINE B2 -32 166 2 3 1261 180 0 0 0 chr17 88642070 88642090 -6630561 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 3 1261 1182 56 0 0 chr17 88642091 88642233 -6630418 - B1_Mus1 SINE Alu -6 142 1 3 1261 601 319 100 47 chr17 88642308 88642407 -6630244 - L1M2 LINE L1 -747 6098 6005 3 1261 213 65 0 0 chr17 88642407 88642438 -6630213 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1261 601 319 100 47 chr17 88642438 88642854 -6629797 - L1M2 LINE L1 -841 6004 5576 3 1261 582 15 0 0 chr17 88642854 88642921 -6629730 + (TTTTG)n Simple_repeat Simple_repeat 4 70 0 3 1261 601 319 100 47 chr17 88642921 88643206 -6629445 - L1M2 LINE L1 -1270 5575 5256 3 1261 623 282 134 52 chr17 88643469 88643945 -6628706 - L1M2 LINE L1 -1647 5198 4684 3 1261 305 163 46 11 chr17 88643976 88643993 -6628658 + polypyrimidine Low_complexity Low_complexity 75 91 0 3 1261 982 149 13 11 chr17 88643993 88644244 -6628407 + CT-rich Low_complexity Low_complexity 1 251 0 3 1261 1264 67 0 16 chr17 88644247 88644429 -6628222 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 3 1261 428 0 19 0 chr17 88644505 88644557 -6628094 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 1261 387 0 0 0 chr17 88644557 88644599 -6628052 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1261 588 262 34 41 chr17 88644607 88644754 -6627897 - RSINE1 SINE B4 -17 148 3 3 1261 897 279 45 37 chr17 88644754 88645090 -6627561 - L1M2 LINE L1 -2677 4168 3628 3 1261 739 282 37 0 chr17 88645090 88645306 -6627345 - ID_B1 SINE B4 0 224 1 3 1261 897 307 56 87 chr17 88645306 88645464 -6627187 - L1M2 LINE L1 -3210 3635 3483 3 1261 1166 55 14 0 chr17 88645464 88645610 -6627041 - B1_Mur4 SINE Alu -1 149 2 3 1261 897 313 77 95 chr17 88645610 88646455 -6626196 - L1M2 LINE L1 -3363 3482 2629 3 1261 1611 26 11 0 chr17 88646455 88646646 -6626005 - B2_Mm1a SINE B2 0 193 1 4 1261 562 332 94 30 chr17 88646646 88646984 -6625667 - L1M2 LINE L1 -4279 2570 2204 3 1261 1373 51 85 0 chr17 88646984 88647161 -6625490 - B2_Mm1a SINE B2 -1 192 1 4 1261 562 332 94 30 chr17 88647161 88647216 -6625435 - L1M2 LINE L1 -4646 2203 2152 3 1261 799 235 0 24 chr17 88647258 88647424 -6625227 + RSINE1 SINE B4 2 163 -2 4 1261 794 174 202 27 chr17 88647515 88647698 -6624953 - B3 SINE B2 0 216 2 4 1261 212 0 36 0 chr17 88647821 88647849 -6624802 + (TTTTTG)n Simple_repeat Simple_repeat 1 29 0 4 1261 21 0 0 0 chr17 88648792 88648813 -6623838 + AT_rich Low_complexity Low_complexity 1 21 0 4 1261 207 0 0 0 chr17 88648879 88648902 -6623749 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1261 1247 41 0 0 chr17 88648902 88649049 -6623602 - B1_Mus2 SINE Alu 0 147 1 4 1261 2795 128 14 5 chr17 88649061 88649476 -6623175 - MTC LTR MaLR -1 420 2 4 1261 237 322 42 8 chr17 88649759 88649878 -6622773 + L1ME3A LINE L1 5881 6003 -170 4 1261 258 202 136 25 chr17 88649916 88649997 -6622654 + L1ME3A LINE L1 6079 6168 -5 4 1261 1010 141 6 0 chr17 88650008 88650171 -6622480 + B2_Mm2 SINE B2 2 165 -30 4 1261 432 49 277 36 chr17 88650215 88650326 -6622325 + B2_Mm2 SINE B2 46 188 -7 4 1261 1130 179 37 0 chr17 88650620 88650838 -6621813 - URR1A DNA MER1_type 0 226 1 4 1261 3729 122 63 6 chr17 88652183 88652834 -6619817 - MYSERV16_I-int LTR ERVK -563 1763 1076 4 1261 1191 43 0 0 chr17 88652834 88652973 -6619678 + B1_Mus2 SINE Alu 3 141 -6 4 1261 327 25 0 0 chr17 88652975 88653015 -6619636 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 4 1261 198 0 0 0 chr17 88653321 88653343 -6619308 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 4 1261 255 167 0 69 chr17 88653649 88653707 -6618944 + MYSERV16_I-int LTR ERVK 1214 1267 -1059 4 1261 665 150 41 16 chr17 88653881 88654003 -6618648 + B1_Mm SINE Alu 23 147 0 4 1261 1118 75 0 27 chr17 88654089 88654239 -6618412 + B1_Mus1 SINE Alu 2 147 -1 4 1261 455 17 34 0 chr17 88654239 88654298 -6618353 + (GAAA)n Simple_repeat Simple_repeat 1 61 0 4 1261 184 384 45 19 chr17 88656221 88656375 -6616276 - MIRb SINE MIR -106 162 5 4 1261 204 67 0 0 chr17 88656942 88656972 -6615679 + (CAA)n Simple_repeat Simple_repeat 1 30 0 4 1261 249 108 0 0 chr17 88657158 88657195 -6615456 + (T)n Simple_repeat Simple_repeat 1 37 0 4 1261 742 71 71 0 chr17 88657195 88657308 -6615343 - B1_Mm SINE Alu 0 147 27 4 1261 1452 64 11 5 chr17 88657313 88657502 -6615149 - B2_Mm1t SINE B2 -1 192 3 4 1261 351 105 0 0 chr17 88658287 88658344 -6614307 + (T)n Simple_repeat Simple_repeat 1 57 0 4 1261 1199 55 7 0 chr17 88658349 88658495 -6614156 - B1_Mus1 SINE Alu -1 147 1 4 1261 528 175 200 0 chr17 88658773 88658893 -6613758 + B1_Mur4 SINE Alu 1 144 -6 4 1261 1154 75 7 0 chr17 88658900 88659047 -6613604 + B1_Mus1 SINE Alu 1 148 0 4 1261 180 111 0 0 chr17 88659049 88659076 -6613575 + (A)n Simple_repeat Simple_repeat 1 27 0 4 1261 465 127 0 0 chr17 88659135 88659214 -6613437 + (TCCA)n Simple_repeat Simple_repeat 3 81 0 4 1261 329 296 115 31 chr17 88659310 88659502 -6613149 - B3A SINE B2 0 216 9 4 1261 1048 170 4 125 chr17 88660503 88660759 -6611892 + URR1B DNA MER1_type 1 225 0 4 1261 639 252 118 37 chr17 88660966 88661238 -6611413 + MTE2b LTR MaLR 58 351 -28 4 1261 289 78 31 72 chr17 88661238 88661335 -6611316 + T-rich Low_complexity Low_complexity 2 94 0 4 1261 965 300 94 25 chr17 88661444 88661983 -6610668 + L1MB2 LINE L1 5496 6069 -102 4 1261 258 229 42 14 chr17 88662457 88662528 -6610123 + MLT1A0 LTR MaLR 286 358 -7 4 1261 348 333 0 140 chr17 88662626 88662724 -6609927 + B1F2 SINE Alu 1 92 -57 4 1261 384 22 0 0 chr17 88662724 88662769 -6609882 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 4 1261 1160 74 0 0 chr17 88662769 88662917 -6609734 + B1_Mus1 SINE Alu 1 148 0 4 1261 348 333 0 140 chr17 88662917 88662981 -6609670 + B1F2 SINE Alu 93 140 -9 4 1261 264 217 0 28 chr17 88663138 88663209 -6609442 + T-rich Low_complexity Low_complexity 6 74 0 4 1261 373 297 163 0 chr17 88663281 88663483 -6609168 - B4A SINE B4 -56 236 2 4 1261 303 321 42 35 chr17 88663647 88663789 -6608862 - B1F2 SINE Alu -6 143 1 4 1261 225 297 39 19 chr17 88663870 88663973 -6608678 + MLT2E LTR ERVL 48 152 -476 4 1261 312 241 23 156 chr17 88664311 88664325 -6608326 + PB1D7 SINE Alu 9 118 -1 4 1261 399 274 71 0 chr17 88664325 88664438 -6608213 + ID_B1 SINE B4 104 224 0 4 1261 448 135 137 51 chr17 88664570 88664687 -6607964 - RLTR47_MM LTR ERV1 0 532 406 4 1261 241 261 44 22 chr17 88664884 88664974 -6607677 + RLTR33 LTR ERVK 501 592 -86 4 1261 514 231 160 11 chr17 88665608 88665783 -6606868 - B4A SINE B4 -91 201 1 4 1261 233 313 34 121 chr17 88666208 88666415 -6606236 + B3A SINE B2 1 189 -9 4 1261 26 0 0 0 chr17 88666416 88666442 -6606209 + AT_rich Low_complexity Low_complexity 1 26 0 4 1261 1329 80 9 27 chr17 88666685 88666904 -6605747 - RMER6C LTR ERVK -58 632 418 4 1261 479 233 27 14 chr17 88667501 88667649 -6605002 - RCHARR1 DNA MER1_type -62 912 763 4 1261 593 241 81 16 chr17 88667673 88667859 -6604792 - B3A SINE B2 0 198 1 4 1261 618 224 6 56 chr17 88667867 88667894 -6604757 - RCHARR1 DNA MER1_type -221 753 731 4 1261 1068 36 7 68 chr17 88667894 88668041 -6604610 + B1_Mus1 SINE Alu 2 139 -9 4 1261 315 0 0 0 chr17 88668041 88668076 -6604575 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1261 618 224 6 56 chr17 88668076 88668227 -6604424 - RCHARR1 DNA MER1_type -244 730 584 4 1261 649 246 30 30 chr17 88668228 88668459 -6604192 + RLTR10D LTR ERVK 1 231 -128 4 1261 635 229 53 114 chr17 88668475 88668756 -6603895 - RCHARR1 DNA MER1_type -397 577 314 4 1261 664 131 115 0 chr17 88668767 88668889 -6603762 - B1_Mur4 SINE Alu -1 149 14 4 1261 4234 57 2 0 chr17 88668890 88669401 -6603250 + L1_Mus1 LINE L1 6056 6567 0 4 1261 1797 42 0 130 chr17 88669412 88669713 -6602938 + RLTR10B LTR ERVK 1 262 -30 4 1261 216 0 0 0 chr17 88669727 88669751 -6602900 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1261 446 306 61 112 chr17 88669769 88670082 -6602569 - RCHARR1 DNA MER1_type -675 299 3 4 1261 1564 154 80 56 chr17 88670417 88670755 -6601896 + ORR1B1 LTR MaLR 41 386 -8 4 1261 4463 207 106 107 chr17 88670760 88672552 -6600099 + ORR1B1-int LTR MaLR 2 1792 0 4 1261 1733 126 74 71 chr17 88672559 88672909 -6599742 + ORR1B1 LTR MaLR 41 391 -3 4 1261 238 315 45 0 chr17 88672909 88673007 -6599644 + ID_B1 SINE B4 121 223 -1 4 1261 324 242 104 10 chr17 88673175 88673271 -6599380 - ID_B1 SINE B4 -29 195 91 4 1261 262 172 17 17 chr17 88673579 88673638 -6599013 + ID4 SINE ID 3 61 -22 4 1261 333 0 0 0 chr17 88673745 88673782 -6598869 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1261 207 69 0 0 chr17 88673968 88673997 -6598654 + (A)n Simple_repeat Simple_repeat 1 29 0 4 1261 270 0 0 0 chr17 88674130 88674160 -6598491 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1261 549 225 81 76 chr17 88674810 88675007 -6597644 + B3A SINE B2 1 198 0 4 1261 5369 99 9 3 chr17 88675012 88675761 -6596890 + L1Md_F2 LINE L1 5829 6582 0 4 1261 430 257 9 18 chr17 88675861 88675972 -6596679 + PB1D9 SINE Alu 3 112 -8 4 1261 609 192 0 40 chr17 88676145 88676270 -6596381 + PB1D9 SINE Alu 1 120 0 4 1261 21 0 0 0 chr17 88676532 88676553 -6596098 + AT_rich Low_complexity Low_complexity 1 21 0 4 1261 465 273 17 0 chr17 88677047 88677223 -6595428 + (CA)n Simple_repeat Simple_repeat 1 179 0 4 1261 244 296 19 0 chr17 88677236 88677344 -6595307 + (CA)n Simple_repeat Simple_repeat 1 110 0 4 1261 1313 94 1 5 chr17 88677485 88677693 -6594958 + RMER16 LTR ERVK 11 304 -229 4 1261 3595 35 31 2 chr17 88677693 88678117 -6594534 - RLTR10C LTR ERVK 0 436 1 4 1261 1384 98 89 89 chr17 88678120 88678242 -6594409 - RMER16-int LTR ERVK -5126 280 142 4 1261 429 20 0 0 chr17 88678242 88678292 -6594359 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1261 1384 98 89 89 chr17 88678292 88678449 -6594202 - RMER16-int LTR ERVK -5265 141 2 4 1261 991 114 13 6 chr17 88678449 88678608 -6594043 - RMER16 LTR ERVK 0 533 374 4 1261 3342 161 32 32 chr17 88678608 88679256 -6593395 + RMER16-int LTR ERVK 3225 3872 -1534 4 1261 720 0 0 0 chr17 88679293 88679373 -6593278 + (GAA)n Simple_repeat Simple_repeat 1 80 0 4 1261 8078 116 36 17 chr17 88679839 88681085 -6591566 + RMER16-int LTR ERVK 4137 5406 0 4 1261 2008 118 8 0 chr17 88681085 88681417 -6591234 + RMER16 LTR ERVK 1 379 -154 4 1261 227 384 15 0 chr17 88681649 88681782 -6590869 - L1M5 LINE L1 -3322 2824 2690 4 1261 22 56 0 0 chr17 88681952 88681988 -6590663 + AT_rich Low_complexity Low_complexity 1 36 0 4 1261 511 261 0 26 chr17 88681989 88682103 -6590548 - RSINE1 SINE B4 -1 164 54 4 1261 482 130 19 22 chr17 88682111 88682221 -6590430 + ORR1B1 LTR MaLR 1 125 -269 4 1261 1553 198 40 29 chr17 88682214 88682593 -6590058 + ORR1B1 LTR MaLR 12 394 0 4 1261 1071 222 86 55 chr17 88682744 88683106 -6589545 - RMER13A LTR ERVK -480 380 8 4 1261 1376 199 144 34 chr17 88683081 88683524 -6589127 + RLTR11A LTR ERVK 9 500 -28 4 1261 634 308 139 19 chr17 88684142 88684466 -6588185 + MLT1A0 LTR MaLR 1 363 -2 4 1261 1055 42 0 0 chr17 88685085 88685227 -6587424 + B1_Mus1 SINE Alu 7 148 0 4 1261 531 0 0 0 chr17 88685237 88685296 -6587355 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 4 1261 569 282 67 27 chr17 88685528 88685836 -6586815 - MLT1B LTR MaLR -75 392 52 4 1261 338 299 28 0 chr17 88685855 88685962 -6586689 - PB1D10 SINE Alu -2 115 6 4 1261 849 285 9 0 chr17 88686008 88686222 -6586429 - ID_B1 SINE B4 -2 222 7 4 1261 676 240 64 30 chr17 88686312 88686514 -6586137 + B3 SINE B2 1 209 -7 4 1261 207 0 0 0 chr17 88686766 88686789 -6585862 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1261 694 192 113 6 chr17 88687177 88687332 -6585319 + MTC LTR MaLR 2 174 -247 4 1261 711 136 16 31 chr17 88687332 88687461 -6585190 + RLTR25B LTR ERVK 1 127 -901 4 1261 842 83 0 8 chr17 88687460 88687581 -6585070 + B1_Mm SINE Alu 27 146 -1 4 1261 3733 156 117 51 chr17 88687586 88688307 -6584344 + RLTR25B LTR ERVK 112 884 -144 4 1261 336 24 0 0 chr17 88688307 88688348 -6584303 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1261 3733 156 117 51 chr17 88688348 88688486 -6584165 + RLTR25B LTR ERVK 885 1028 0 4 1261 1371 210 12 8 chr17 88688486 88688741 -6583910 + MTC LTR MaLR 162 417 -4 4 1261 308 281 78 11 chr17 88688774 88688864 -6583787 - ID_B1 SINE B4 -19 205 110 5 1261 275 154 15 0 chr17 88688894 88688959 -6583692 + (TA)n Simple_repeat Simple_repeat 2 67 0 5 1261 5179 182 24 34 chr17 88688964 88690015 -6582636 + MYSERV6-int LTR ERVK 7920 8959 0 5 1261 784 211 106 37 chr17 88690038 88690284 -6582367 + RLTR12B LTR ERVK 47 309 -219 5 1261 286 313 0 0 chr17 88690445 88690512 -6582139 - ID4 SINE ID -16 67 1 5 1261 2175 143 66 5 chr17 88690584 88690964 -6581687 + MTC LTR MaLR 1 403 -18 5 1261 5466 115 6 12 chr17 88691526 88692381 -6580270 - L1_Mur2 LINE L1 -2544 3333 2484 5 1261 2743 196 57 78 chr17 88692397 88693155 -6579496 + RMER13B LTR ERVK 5 746 -162 5 1261 5997 128 94 18 chr17 88693156 88693517 -6579134 - L1_Mur2 LINE L1 -3443 2434 2073 5 1261 186 43 0 0 chr17 88693517 88693540 -6579111 + (TGG)n Simple_repeat Simple_repeat 1 23 0 5 1261 5997 136 98 14 chr17 88693540 88694814 -6577837 - L1_Mur2 LINE L1 -3805 2072 648 5 1261 25 0 0 0 chr17 88694831 88694856 -6577795 + AT_rich Low_complexity Low_complexity 1 25 0 5 1261 659 218 27 27 chr17 88694881 88695027 -6577624 - RSINE1 SINE B4 -9 156 11 5 1261 1049 271 118 12 chr17 88695005 88695413 -6577238 + MER45B DNA Tip100 465 915 -125 5 1261 514 270 102 0 chr17 88695482 88695619 -6577032 - RSINE1 SINE B4 -12 153 3 5 1261 207 100 0 0 chr17 88695637 88695667 -6576984 + (TTA)n Simple_repeat Simple_repeat 3 32 0 5 1261 234 128 0 0 chr17 88695667 88695706 -6576945 + (TAG)n Simple_repeat Simple_repeat 1 39 0 5 1261 344 320 29 10 chr17 88695710 88695814 -6576837 - PB1D7 SINE Alu -5 115 10 5 1261 480 246 131 0 chr17 88695857 88695987 -6576664 - B1F2 SINE Alu -1 148 2 5 1261 644 114 17 9 chr17 88696614 88696729 -6575922 + B1_Mur4 SINE Alu 35 150 0 5 1261 393 232 0 0 chr17 88697239 88697334 -6575317 + CT-rich Low_complexity Low_complexity 1 95 0 5 1261 212 292 26 53 chr17 88697447 88697523 -6575128 + ID4 SINE ID 2 75 -8 5 1261 210 148 36 18 chr17 88697525 88697580 -6575071 + (CAA)n Simple_repeat Simple_repeat 2 57 0 5 1261 666 247 19 63 chr17 88697704 88697740 -6574911 + MTD LTR MaLR 5 34 -385 5 1261 1428 125 8 47 chr17 88697740 88697975 -6574676 + URR1A DNA MER1_type 1 226 0 5 1261 666 247 19 63 chr17 88697975 88698145 -6574506 + MTD LTR MaLR 35 202 -217 5 1261 357 214 96 0 chr17 88698160 88698252 -6574399 + MTD LTR MaLR 243 403 -16 5 1261 2593 77 3 0 chr17 88698396 88698722 -6573929 + ORR1A2 LTR MaLR 1 327 0 5 1261 2961 135 88 0 chr17 88698722 88699278 -6573373 + ORR1A2-int LTR MaLR 1 605 -1187 5 1261 609 156 0 0 chr17 88699233 88699329 -6573322 + MT2B LTR ERVL 158 253 -348 5 1261 2648 105 9 16 chr17 88699356 88699783 -6572868 + ORR1A2-int LTR MaLR 1540 1963 0 5 1261 1894 118 42 0 chr17 88699783 88700089 -6572562 + ORR1A2 LTR MaLR 1 319 -8 5 1261 329 331 92 4 chr17 88700452 88700701 -6571950 - Tigger8 DNA MER2_type -88 578 308 5 1261 1699 26 0 0 chr17 88700843 88701034 -6571617 + B2_Mm1a SINE B2 2 192 -1 5 1261 1161 106 0 0 chr17 88701433 88701822 -6570829 + (CA)n Simple_repeat Simple_repeat 1 389 0 5 1261 238 160 20 0 chr17 88701826 88701876 -6570775 - RMER5 LTR ERV1 -483 51 1 5 1261 762 124 0 0 chr17 88701895 88702048 -6570603 + (TG)n Simple_repeat Simple_repeat 2 154 0 5 1261 192 97 0 0 chr17 88702049 88702080 -6570571 + (TCTCTG)n Simple_repeat Simple_repeat 6 36 0 5 1261 751 280 28 48 chr17 88702096 88702344 -6570307 - Lx9 LINE L1 -310 7334 7092 5 1261 183 162 0 0 chr17 88702424 88702461 -6570190 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1261 297 109 0 0 chr17 88702475 88702521 -6570130 + (TATATG)n Simple_repeat Simple_repeat 5 50 0 5 1261 1158 75 0 0 chr17 88702676 88702822 -6569829 - B1_Mus1 SINE Alu -1 147 2 5 1261 356 243 0 0 chr17 88702859 88702933 -6569718 - RSINE1 SINE B4 -89 76 3 5 1261 745 226 97 55 chr17 88702937 88703194 -6569457 - Lx8 LINE L1 -206 7267 7000 5 1261 422 240 53 30 chr17 88703201 88703334 -6569317 - B1F2 SINE Alu -1 148 13 5 1261 1400 168 118 3 chr17 88703754 88704077 -6568574 + ORR1B2 LTR MaLR 3 362 -5 5 1261 972 67 0 15 chr17 88704083 88704220 -6568431 + B1_Mus1 SINE Alu 12 146 -2 5 1261 785 65 9 0 chr17 88704224 88704332 -6568319 + (GAAAA)n Simple_repeat Simple_repeat 3 111 0 5 1261 217 109 0 42 chr17 88704437 88704485 -6568166 + GA-rich Low_complexity Low_complexity 4 49 0 5 1261 287 234 25 25 chr17 88704876 88704955 -6567696 + CT-rich Low_complexity Low_complexity 3 81 0 5 1261 683 244 197 18 chr17 88705802 88706086 -6566565 + ORR1D2 LTR MaLR 1 335 -35 5 1261 189 214 0 0 chr17 88706098 88706140 -6566511 + (CACG)n Simple_repeat Simple_repeat 1 42 0 5 1261 511 300 41 35 chr17 88706403 88706600 -6566051 - B3A SINE B2 0 198 1 5 1261 27 0 0 0 chr17 88706884 88706911 -6565740 + AT_rich Low_complexity Low_complexity 1 27 0 5 1261 291 223 106 0 chr17 88707070 88707164 -6565487 + RMER5 LTR ERV1 69 172 -362 5 1261 912 194 91 6 chr17 88707265 88707530 -6565121 - ORR1A4 LTR MaLR -8 370 1 5 1261 489 246 65 0 chr17 88707574 88707712 -6564939 + RMER5 LTR ERV1 369 515 -19 5 1261 864 178 0 14 chr17 88708251 88708399 -6564252 + B1_Mus1 SINE Alu 1 146 -2 5 1261 6280 38 3 1 chr17 88708402 88709145 -6563506 + L1Md_F2 LINE L1 5839 6582 0 5 1261 1208 61 0 0 chr17 88709148 88709296 -6563355 + B1_Mus1 SINE Alu 1 148 0 5 1261 21 71 0 0 chr17 88709331 88709373 -6563278 + AT_rich Low_complexity Low_complexity 1 42 0 5 1261 219 139 0 0 chr17 88709534 88709570 -6563081 + (TATATG)n Simple_repeat Simple_repeat 2 37 0 5 1261 1443 123 27 5 chr17 88710293 88710514 -6562137 + URR1A DNA MER1_type 1 226 0 5 1261 477 0 0 0 chr17 88710597 88710650 -6562001 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1261 987 32 0 0 chr17 88711476 88711599 -6561052 + (TG)n Simple_repeat Simple_repeat 2 124 0 5 1261 412 333 12 6 chr17 88711872 88712038 -6560613 + L1M2 LINE L1 4889 5055 -1088 5 1261 1203 29 0 0 chr17 88712052 88712189 -6560462 + B1_Mus1 SINE Alu 2 138 -10 5 1261 527 269 22 71 chr17 88712303 88712487 -6560164 + B3 SINE B2 40 214 -2 5 1261 213 39 0 0 chr17 88712667 88712693 -6559958 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 5 1261 783 192 6 12 chr17 88712706 88712875 -6559776 - ORR1D1 LTR MaLR -205 169 2 5 1261 233 29 29 0 chr17 88713080 88713114 -6559537 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 5 1261 464 206 46 50 chr17 88713179 88713201 -6559450 - B1F2 SINE Alu -16 132 48 5 1261 530 223 0 0 chr17 88713201 88713304 -6559347 - ID_B1 SINE B4 -28 196 94 5 1261 949 224 41 0 chr17 88713351 88713547 -6559104 - B3 SINE B2 -9 207 4 5 1261 243 0 0 0 chr17 88713552 88713579 -6559072 + (TTA)n Simple_repeat Simple_repeat 1 27 0 5 1261 479 246 0 6 chr17 88714244 88714424 -6558227 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 1261 1333 239 94 48 chr17 88714432 88714890 -6557761 - RLTR20B3 LTR ERVK -98 479 1 5 1261 1253 187 5 9 chr17 88714959 88715175 -6557476 + B3 SINE B2 2 216 0 5 1261 234 206 63 76 chr17 88715184 88715196 -6557455 + RLTR25B LTR ERVK 432 508 -519 5 1261 276 178 0 61 chr17 88715196 88715262 -6557389 + MT2B LTR ERVL 197 258 -343 5 1261 543 73 0 35 chr17 88715204 88715289 -6557362 + B1_Mur3 SINE Alu 48 129 -20 5 1261 260 0 0 54 chr17 88715297 88715334 -6557317 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1261 584 230 18 58 chr17 88715433 88715604 -6557047 - B3A SINE B2 -5 193 30 5 1261 410 36 18 0 chr17 88715697 88715753 -6556898 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 1261 486 0 0 0 chr17 88716085 88716139 -6556512 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 1261 483 257 37 0 chr17 88716588 88716697 -6555954 + RSINE1 SINE B4 2 114 -51 5 1261 236 260 62 38 chr17 88716926 88717006 -6555645 + ORR1E LTR MaLR 4 85 -274 5 1261 278 157 0 0 chr17 88717495 88717546 -6555105 - ID_B1 SINE B4 0 224 174 5 1261 216 203 39 51 chr17 88717546 88717573 -6555078 - PB1D10 SINE Alu 0 117 41 5 1261 292 296 116 7 chr17 88717984 88718130 -6554521 + LTR85b LTR Gypsy? 607 768 -16 5 1261 201 108 0 0 chr17 88718739 88718776 -6553875 + (CCTG)n Simple_repeat Simple_repeat 2 38 0 5 1261 1042 69 17 11 chr17 88718776 88718951 -6553700 + (TTCC)n Simple_repeat Simple_repeat 3 179 0 5 1261 374 129 35 12 chr17 88718957 88719043 -6553608 + CT-rich Low_complexity Low_complexity 4 91 0 5 1261 258 32 0 0 chr17 88719056 88719087 -6553564 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 5 1261 872 170 7 0 chr17 88719109 88719256 -6553395 - B1_Mus1 SINE Alu 0 148 1 5 1261 24 32 0 0 chr17 88719312 88719343 -6553308 + AT_rich Low_complexity Low_complexity 1 31 0 5 1261 686 133 7 0 chr17 88719419 88719569 -6553082 + (TG)n Simple_repeat Simple_repeat 2 152 0 5 1261 769 132 20 28 chr17 88719585 88720090 -6552561 + (TG)n Simple_repeat Simple_repeat 1 501 0 5 1261 469 221 63 0 chr17 88720107 88720262 -6552389 - B3 SINE B2 -19 179 3 5 1261 315 0 0 0 chr17 88720663 88720698 -6551953 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1261 597 28 0 0 chr17 88720698 88720768 -6551883 + (GA)n Simple_repeat Simple_repeat 1 71 0 5 1261 246 193 35 0 chr17 88721601 88721658 -6550993 + CT-rich Low_complexity Low_complexity 3 61 0 5 1261 703 242 23 53 chr17 88721658 88721920 -6550731 - RLTR11A2 LTR ERVK -267 260 7 5 1261 429 76 0 0 chr17 88721930 88721996 -6550655 + (TG)n Simple_repeat Simple_repeat 2 67 0 5 1261 702 271 120 4 chr17 88722022 88722281 -6550370 - B4A SINE B4 -1 291 3 5 1261 420 273 36 9 chr17 88722575 88722686 -6549965 + PB1D7 SINE Alu 1 114 -6 5 1261 1026 110 0 0 chr17 88722687 88722842 -6549809 + (GGAGAA)n Simple_repeat Simple_repeat 3 157 0 5 1261 549 0 0 0 chr17 88722842 88722902 -6549749 + (GAAA)n Simple_repeat Simple_repeat 1 61 0 5 1261 676 306 52 9 chr17 88722902 88723113 -6549538 + B4 SINE B4 4 223 -69 5 1261 857 145 0 46 chr17 88723122 88723135 -6549516 + B1_Mur4 SINE Alu 6 15 -135 6 1261 1099 61 0 0 chr17 88723135 88723267 -6549384 - B1_Mus1 SINE Alu -15 133 2 6 1261 857 145 0 46 chr17 88723267 88723405 -6549246 + B1_Mur4 SINE Alu 16 150 0 6 1261 650 340 20 0 chr17 88723469 88723672 -6548979 + B4A SINE B4 56 262 -30 6 1261 488 77 44 0 chr17 88723683 88723774 -6548877 + (CA)n Simple_repeat Simple_repeat 2 96 0 6 1261 238 245 0 36 chr17 88723774 88723829 -6548822 + B4 SINE B4 218 270 -22 5 1261 444 51 0 0 chr17 88723835 88723894 -6548757 + (CA)n Simple_repeat Simple_repeat 1 59 0 6 1261 240 244 199 30 chr17 88724195 88724326 -6548325 - LTR48 LTR ERV1 -152 635 483 6 1261 720 236 25 25 chr17 88727206 88727406 -6545245 + URR1B DNA MER1_type 26 225 0 6 1261 240 59 0 0 chr17 88727691 88727725 -6544926 + (T)n Simple_repeat Simple_repeat 1 34 0 6 1261 330 286 86 16 chr17 88727931 88728059 -6544592 + B1F2 SINE Alu 6 142 -7 6 1261 289 282 0 0 chr17 88728471 88728542 -6544109 - MADE2 DNA Mariner -9 71 1 6 1261 231 343 0 19 chr17 88728925 88729029 -6543622 + G-rich Low_complexity Low_complexity 3 104 0 6 1261 860 176 53 28 chr17 88729597 88729793 -6542858 - B3 SINE B2 -15 180 3 6 1261 1831 123 41 7 chr17 88730356 88730650 -6542001 - MTC LTR MaLR 0 421 118 6 1261 1020 96 0 0 chr17 88731020 88731166 -6541485 + (TCC)n Simple_repeat Simple_repeat 2 147 0 6 1261 1203 55 0 0 chr17 88731167 88731313 -6541338 - B1_Mm SINE Alu 0 147 2 6 1261 3417 179 35 31 chr17 88731863 88732624 -6540027 - MYSERV16_I-int LTR ERVK -1636 690 1 6 1261 1346 205 49 83 chr17 88733009 88733456 -6539195 - RLTR11A LTR ERVK -96 432 1 6 1261 865 293 51 69 chr17 88734055 88734389 -6538262 + RCHARR1 DNA MER1_type 3 330 -644 6 1261 402 21 0 0 chr17 88734408 88734455 -6538196 + (TATG)n Simple_repeat Simple_repeat 2 48 0 6 1261 695 192 8 0 chr17 88734462 88734582 -6538069 - B3A SINE B2 -42 156 36 6 1261 413 202 0 0 chr17 88734600 88734684 -6537967 + RCHARR1 DNA MER1_type 313 396 -578 6 1261 310 313 145 29 chr17 88734739 88734877 -6537774 - RSINE1 SINE B4 -10 155 2 6 1261 483 209 153 62 chr17 88734877 88735085 -6537566 + RCHARR1 DNA MER1_type 727 953 -21 6 1262 360 0 0 0 chr17 88736154 88736194 -6536457 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1262 291 313 71 0 chr17 88736374 88736473 -6536178 + ID_B1 SINE B4 110 215 -9 6 1262 270 308 58 25 chr17 88736498 88736618 -6536033 + MLT1C LTR MaLR 298 421 -46 6 1262 306 0 0 0 chr17 88737850 88737884 -6534767 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 1262 881 133 0 22 chr17 88737887 88738025 -6534626 - B1_Mur4 SINE Alu -14 136 2 6 1262 1291 88 66 0 chr17 88738037 88738219 -6534432 - B2_Mm2 SINE B2 0 195 2 6 1262 1108 237 5 0 chr17 88738567 88738782 -6533869 + B3 SINE B2 1 216 0 6 1262 351 318 0 0 chr17 88738949 88739034 -6533617 - RSINE1 SINE B4 0 165 81 6 1262 711 215 38 67 chr17 88739051 88739260 -6533391 + MTD LTR MaLR 216 418 -1 6 1262 407 150 0 81 chr17 88739841 88739928 -6532723 - ORR1B2 LTR MaLR -287 80 1 6 1262 1338 87 32 0 chr17 88740074 88740259 -6532392 + B2_Mm1t SINE B2 1 191 -2 6 1262 207 0 208 0 chr17 88740533 88740581 -6532070 + (TCCTG)n Simple_repeat Simple_repeat 1 58 0 6 1262 220 91 35 35 chr17 88740902 88740959 -6531692 + T-rich Low_complexity Low_complexity 4 60 0 6 1262 430 114 12 25 chr17 88740962 88741043 -6531608 - B1_Mus2 SINE Alu 0 147 68 6 1262 299 231 0 0 chr17 88741266 88741331 -6531320 + ID4_ SINE ID 4 68 -15 6 1262 317 24 24 0 chr17 88741524 88741566 -6531085 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 6 1262 777 73 0 0 chr17 88741566 88741676 -6530975 - B1_Mus2 SINE Alu -10 137 28 6 1262 360 258 112 0 chr17 88741735 88741824 -6530827 - U6 snRNA snRNA -8 99 1 6 1262 254 95 24 0 chr17 88741978 88742020 -6530631 + (TCCC)n Simple_repeat Simple_repeat 1 43 0 6 1262 370 141 169 0 chr17 88742020 88742091 -6530560 - ID2 SINE ID 0 83 1 6 1262 522 0 0 0 chr17 88742298 88742356 -6530295 + (TC)n Simple_repeat Simple_repeat 2 59 0 6 1262 180 0 0 0 chr17 88742357 88742377 -6530274 + (CA)n Simple_repeat Simple_repeat 2 21 0 6 1262 202 333 0 0 chr17 88744771 88744837 -6527814 - MIR SINE MIR -113 95 30 6 1262 288 231 340 0 chr17 88745456 88745562 -6527089 - RSINE1 SINE B4 -23 142 1 6 1262 309 196 126 36 chr17 88745957 88746068 -6526583 + RLTR15 LTR ERVK 1 121 -238 6 1262 305 250 168 31 chr17 88746099 88746260 -6526391 - RLTR41 LTR ERV1 0 446 264 6 1262 323 241 74 25 chr17 88747022 88747103 -6525548 - PB1D10 SINE Alu -20 97 13 6 1262 324 0 0 0 chr17 88747125 88747161 -6525490 + (TTG)n Simple_repeat Simple_repeat 2 37 0 6 1262 210 200 0 0 chr17 88747163 88747208 -6525443 - B3A SINE B2 -144 54 10 6 1262 879 259 113 31 chr17 88747345 88747671 -6524980 + ORR1E LTR MaLR 7 359 0 6 1262 266 224 277 75 chr17 88748312 88748471 -6524180 - B4A SINE B4 0 292 102 6 1262 318 50 0 0 chr17 88748477 88748517 -6524134 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1262 379 305 85 85 chr17 88748723 88748995 -6523656 + B4 SINE B4 3 274 -18 6 1262 198 0 0 0 chr17 88749058 88749080 -6523571 + (CA)n Simple_repeat Simple_repeat 2 23 0 6 1262 558 337 128 41 chr17 88750947 88751111 -6521540 + MLT1F2 LTR MaLR 109 308 -252 6 1262 2242 142 53 3 chr17 88751111 88751486 -6521165 - ORR1B1 LTR MaLR 0 394 1 6 1262 558 337 128 41 chr17 88751486 88751664 -6520987 + MLT1F2 LTR MaLR 309 481 -79 6 1262 1098 97 0 0 chr17 88751721 88751865 -6520786 - B1_Mus1 SINE Alu -3 145 2 6 1262 411 321 27 41 chr17 88752198 88752232 -6520419 - ID_B1 SINE B4 0 224 192 6 1262 1460 131 279 32 chr17 88752232 88752540 -6520111 - ORR1C2 LTR MaLR 0 384 1 6 1262 411 321 27 41 chr17 88752540 88752651 -6520000 - ID_B1 SINE B4 -33 191 81 6 1262 265 279 24 81 chr17 88752662 88752804 -6519847 - MER5A DNA MER1_type -29 137 1 6 1262 30756 133 16 13 chr17 88753564 88755933 -6516718 + L1_Mus3 LINE L1 529 2895 -2988 6 1262 1245 96 0 0 chr17 88755933 88756111 -6516540 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 6 1262 30756 111 13 9 chr17 88756111 88756126 -6516525 + L1_Mus3 LINE L1 2896 2896 -2987 6 1262 645 14 0 0 chr17 88756126 88756200 -6516451 + (GAGAA)n Simple_repeat Simple_repeat 4 77 0 6 1262 30756 99 10 7 chr17 88756200 88759905 -6512746 + L1_Mus3 LINE L1 2896 6638 0 6 1262 234 0 98 0 chr17 88760127 88760168 -6512483 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 6 1262 241 274 94 34 chr17 88761111 88761228 -6511423 + MLT1A LTR MaLR 234 357 -17 6 1262 3170 57 3 0 chr17 88761513 88761897 -6510754 - IAPEY_LTR LTR ERVK 0 385 1 6 1262 348 111 0 0 chr17 88762176 88762230 -6510421 + (CATA)n Simple_repeat Simple_repeat 1 54 0 6 1262 1110 175 23 5 chr17 88762893 88763111 -6509540 - URR1A DNA MER1_type 0 226 5 6 1262 293 244 245 1 chr17 88763891 88764057 -6508594 + MTEa LTR MaLR 175 374 -5 6 1262 807 214 40 0 chr17 88764353 88764526 -6508125 - B3 SINE B2 0 216 37 6 1262 2029 140 72 9 chr17 88764699 88765044 -6507607 - ORR1B2 LTR MaLR 0 367 1 6 1262 1344 56 0 0 chr17 88765329 88765582 -6507069 + (TGGA)n Simple_repeat Simple_repeat 1 253 0 6 1262 1407 62 11 0 chr17 88765600 88765777 -6506874 + B2_Mm1t SINE B2 1 179 -14 6 1262 389 250 153 5 chr17 88765780 88765969 -6506682 + L1MB3 LINE L1 5775 5991 -192 6 1262 1227 170 19 5 chr17 88766098 88766311 -6506340 + B3 SINE B2 1 216 0 6 1262 4968 66 9 5 chr17 88766457 88767096 -6505555 - L1_Mus2 LINE L1 0 6566 5925 6 1262 771 148 49 0 chr17 88767153 88767295 -6505356 - B1_Mur2 SINE Alu 0 149 1 6 1262 264 288 11 38 chr17 88767946 88768051 -6504600 + B1F SINE Alu 50 150 0 6 1262 321 269 11 21 chr17 88768160 88768255 -6504396 + PB1D7 SINE Alu 22 115 -5 6 1262 592 295 0 31 chr17 88768355 88768516 -6504135 - RSINE1 SINE B4 -7 158 3 6 1262 288 0 0 0 chr17 88768608 88768640 -6504011 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 1262 479 17 17 0 chr17 88768640 88768699 -6503952 + (GA)n Simple_repeat Simple_repeat 2 62 0 6 1262 639 182 51 7 chr17 88768738 88768876 -6503775 + B1F2 SINE Alu 5 148 -1 6 1262 1679 165 68 18 chr17 88768880 88769220 -6503431 + RLTR15 LTR ERVK 1 357 -2 6 1262 201 74 0 0 chr17 88769665 88769692 -6502959 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1262 198 103 0 0 chr17 88769697 88769726 -6502925 + (T)n Simple_repeat Simple_repeat 1 29 0 6 1262 945 56 0 0 chr17 88769726 88769852 -6502799 - B1_Mus1 SINE Alu 0 148 23 6 1262 558 0 0 0 chr17 88769863 88769925 -6502726 + (TTA)n Simple_repeat Simple_repeat 2 63 0 6 1262 2049 192 55 96 chr17 88770426 88770516 -6502135 - RLTR20A LTR ERVK 0 541 443 6 1262 360 0 0 0 chr17 88770516 88770556 -6502095 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1262 2049 192 55 96 chr17 88770556 88770660 -6501991 - RLTR20A LTR ERVK -99 442 353 6 1262 669 101 0 0 chr17 88770660 88770759 -6501892 + (TATATG)n Simple_repeat Simple_repeat 4 102 0 6 1262 1187 54 0 7 chr17 88770759 88770908 -6501743 - B1_Mus1 SINE Alu 0 148 1 6 1262 2049 192 55 96 chr17 88770908 88771275 -6501376 - RLTR20A LTR ERVK -189 352 3 6 1262 309 358 139 6 chr17 88771966 88772146 -6500505 + L1MB2 LINE L1 5704 5907 -276 6 1262 478 211 64 0 chr17 88772146 88772255 -6500396 + MTD LTR MaLR 1 116 -303 6 1262 6550 53 1 0 chr17 88772265 88773050 -6499601 + L1_Mus1 LINE L1 5781 6566 -1 6 1262 2363 210 75 71 chr17 88773071 88773482 -6499169 - Lx6 LINE L1 -12 7448 7060 6 1262 1726 179 51 39 chr17 88773482 88773871 -6498780 - ORR1B1 LTR MaLR 0 394 1 6 1262 2363 210 75 71 chr17 88773871 88774023 -6498628 - Lx6 LINE L1 -401 7059 6883 6 1262 1147 173 123 14 chr17 88774040 88774316 -6498335 + MTD LTR MaLR 114 419 0 6 1262 361 227 108 9 chr17 88774341 88774452 -6498199 + L1MB2 LINE L1 5943 6064 -107 6 1262 881 89 0 0 chr17 88774500 88774624 -6498027 + B1_Mus1 SINE Alu 10 133 -15 6 1262 878 109 7 0 chr17 88774631 88774768 -6497883 + (GGGAGA)n Simple_repeat Simple_repeat 3 140 0 6 1262 535 244 0 8 chr17 88775128 88775252 -6497399 - B3 SINE B2 -92 124 2 7 1262 277 123 70 0 chr17 88775538 88775595 -6497056 - MER57C2 LTR ERV1 -2 432 372 7 1262 836 255 5 10 chr17 88775700 88775902 -6496749 + ID_B1 SINE B4 1 201 -23 7 1262 486 0 0 0 chr17 88776002 88776056 -6496595 + (TTGG)n Simple_repeat Simple_repeat 2 55 0 7 1262 216 0 0 0 chr17 88776101 88776125 -6496526 + (GTTTG)n Simple_repeat Simple_repeat 1 24 0 7 1262 332 216 144 0 chr17 88776138 88776235 -6496416 - PB1D9 SINE Alu -5 115 5 7 1262 4662 82 0 13 chr17 88776540 88777168 -6495483 - L1Md_F2 LINE L1 0 6582 5963 7 1262 198 0 0 0 chr17 88777383 88777405 -6495246 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 7 1262 301 356 9 55 chr17 88777405 88777515 -6495136 - PB1D10 SINE Alu -12 105 1 7 1262 212 327 25 108 chr17 88777415 88777532 -6495119 - ID_B1 SINE B4 -48 176 70 7 1262 973 255 22 19 chr17 88777532 88777800 -6494851 + B4A SINE B4 2 270 -22 7 1262 222 91 0 0 chr17 88777803 88777836 -6494815 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1262 886 215 70 0 chr17 88777913 88778099 -6494552 + B3 SINE B2 1 199 -17 7 1262 3532 24 30 30 chr17 88778099 88778535 -6494116 + RLTR10C LTR ERVK 1 436 0 7 1262 246 32 0 0 chr17 88778841 88778872 -6493779 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 1262 317 319 6 65 chr17 88779558 88779726 -6492925 + RMER12 LTR ERVK 750 907 -415 7 1262 2203 111 40 0 chr17 88779784 88780135 -6492516 - MTC LTR MaLR -52 369 5 7 1262 438 20 0 0 chr17 88780201 88780252 -6492399 + (GGA)n Simple_repeat Simple_repeat 1 51 0 7 1262 243 301 37 37 chr17 88780654 88780761 -6491890 - RSINE1 SINE B4 -43 122 16 7 1262 205 322 0 0 chr17 88780836 88780895 -6491756 - L2c LINE L2 -59 3328 3270 7 1262 314 343 52 0 chr17 88781070 88781204 -6491447 + B1F2 SINE Alu 1 141 -8 7 1262 1563 185 104 50 chr17 88781262 88781626 -6491025 - ORR1C2 LTR MaLR 0 384 1 7 1262 1197 41 13 7 chr17 88781785 88781934 -6490717 + B1_Mur4 SINE Alu 1 150 0 7 1262 388 312 0 0 chr17 88782194 88782303 -6490348 + B1F2 SINE Alu 6 114 -35 7 1262 286 314 82 38 chr17 88782303 88782353 -6490298 + B4A SINE B4 91 256 -36 7 1262 831 207 0 0 chr17 88782441 88782591 -6490060 - B1_Mur4 SINE Alu 0 150 1 7 1262 629 232 125 16 chr17 88783076 88783260 -6489391 + ID_B1 SINE B4 2 205 -19 7 1262 1326 13 35 0 chr17 88783285 88783595 -6489056 + (TCTA)n Simple_repeat Simple_repeat 1 321 0 7 1262 884 167 29 0 chr17 88783626 88783764 -6488887 - B1_Mus1 SINE Alu -6 142 1 7 1262 1362 100 11 5 chr17 88784118 88784309 -6488342 - B2_Mm1t SINE B2 0 193 2 7 1262 595 258 0 0 chr17 88784316 88784436 -6488215 + B1_Mur1 SINE Alu 20 139 -10 7 1262 363 364 68 0 chr17 88784443 88784575 -6488076 + B3A SINE B2 28 168 -30 7 1262 780 83 0 0 chr17 88784582 88784691 -6487960 + (CA)n Simple_repeat Simple_repeat 2 110 0 7 1262 937 162 0 0 chr17 88784713 88784855 -6487796 + B1_Mur4 SINE Alu 2 143 -7 7 1262 1797 156 76 3 chr17 88785052 88785393 -6487258 - ORR1B2 LTR MaLR -1 366 1 7 1262 187 333 36 0 chr17 88786638 88786722 -6485929 + L2a LINE L2 3334 3420 -6 7 1262 374 287 10 78 chr17 88786884 88786986 -6485665 + ID_B1 SINE B4 9 103 -121 7 1262 455 241 379 5 chr17 88787265 88787463 -6485188 + B4A SINE B4 2 273 -19 7 1262 223 214 14 14 chr17 88787492 88787563 -6485088 + (CA)n Simple_repeat Simple_repeat 2 72 0 7 1262 697 198 0 0 chr17 88788731 88788857 -6483794 - B1_Mur1 SINE Alu -10 139 14 7 1262 360 208 60 98 chr17 88788762 88788895 -6483756 - B4 SINE B4 -95 197 70 7 1262 982 251 68 29 chr17 88788986 88789265 -6483386 - B4 SINE B4 0 292 3 7 1262 271 306 112 0 chr17 88789293 88789391 -6483260 - PB1 SINE Alu -17 110 2 7 1262 288 77 0 0 chr17 88789750 88789789 -6482862 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 1262 565 254 0 0 chr17 88789829 88789943 -6482708 + ID_B1 SINE B4 109 222 -2 7 1262 368 20 0 20 chr17 88790152 88790202 -6482449 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 7 1262 734 148 25 0 chr17 88790293 88790415 -6482236 + B1_Mus1 SINE Alu 3 127 -21 7 1262 347 140 34 23 chr17 88790428 88790516 -6482135 + GA-rich Low_complexity Low_complexity 3 91 0 7 1262 283 298 21 11 chr17 88790914 88791009 -6481642 + PB1D10 SINE Alu 22 117 0 7 1262 437 291 129 17 chr17 88791224 88791402 -6481249 - B3A SINE B2 0 198 1 7 1262 708 12 0 0 chr17 88791914 88791995 -6480656 + (TTTTC)n Simple_repeat Simple_repeat 2 82 0 7 1262 920 47 0 0 chr17 88792165 88792272 -6480379 - U6 snRNA snRNA 0 107 1 7 1262 808 182 29 0 chr17 88792477 88792614 -6480037 + B1_Mur1 SINE Alu 1 141 -8 7 1262 28 61 0 0 chr17 88792629 88792678 -6479973 + AT_rich Low_complexity Low_complexity 1 49 0 7 1262 1630 168 58 0 chr17 88792682 88792974 -6479677 + Lx9 LINE L1 7041 7349 -295 7 1262 8112 47 11 6 chr17 88792957 88794121 -6478530 + L1_Mus1 LINE L1 5400 6567 0 7 1262 1046 169 164 33 chr17 88794121 88794396 -6478255 + Lx9 LINE L1 7333 7643 -1 7 1262 479 285 14 7 chr17 88794424 88794569 -6478082 + ID_B1 SINE B4 79 224 0 7 1262 27 0 0 0 chr17 88794569 88794596 -6478055 + AT_rich Low_complexity Low_complexity 1 27 0 7 1262 337 197 0 0 chr17 88794605 88794666 -6477985 + B1F2 SINE Alu 3 63 -86 7 1262 506 281 63 63 chr17 88794676 88794866 -6477785 + B3A SINE B2 9 198 0 7 1262 405 247 80 80 chr17 88794903 88795141 -6477510 - L1ME3B LINE L1 -30 6210 5973 7 1262 707 293 47 0 chr17 88795241 88795432 -6477219 + ID_B1 SINE B4 23 222 -2 7 1262 6499 117 12 25 chr17 88795486 88796466 -6476185 + Lx4A LINE L1 6091 7058 0 7 1262 206 156 22 0 chr17 88796468 88796513 -6476138 + A-rich Low_complexity Low_complexity 3 48 0 7 1262 2630 43 61 3 chr17 88796520 88796847 -6475804 + ORR1A1 LTR MaLR 1 346 0 7 1262 279 211 18 0 chr17 88797341 88797398 -6475253 - L1MC5 LINE L1 -934 7027 6970 7 1262 263 333 17 26 chr17 88797539 88797656 -6474995 + PB1D10 SINE Alu 1 116 -1 7 1262 409 322 69 63 chr17 88797661 88797963 -6474688 + B4A SINE B4 2 281 -11 7 1262 378 129 0 0 chr17 88797968 88798030 -6474621 + (CA)n Simple_repeat Simple_repeat 2 63 0 7 1262 226 298 0 0 chr17 88798068 88798125 -6474526 + ID4_ SINE ID 26 82 -1 7 1262 903 125 52 0 chr17 88798914 88799050 -6473601 - B1_Mus1 SINE Alu -5 143 1 7 1262 218 299 30 0 chr17 88800296 88800363 -6472288 + B4A SINE B4 77 145 -147 7 1262 445 241 9 27 chr17 88800311 88800422 -6472229 + PB1D10 SINE Alu 9 117 0 7 1262 324 191 0 0 chr17 88801110 88801199 -6471452 + (TG)n Simple_repeat Simple_repeat 2 90 0 7 1262 198 128 0 0 chr17 88801276 88801315 -6471336 + (TG)n Simple_repeat Simple_repeat 1 39 0 7 1262 216 325 49 73 chr17 88801317 88801353 -6471298 - ID_B1 SINE B4 -103 121 2 7 1262 237 279 0 92 chr17 88801353 88801440 -6471211 - ID4_ SINE ID -3 80 2 7 1262 267 240 147 59 chr17 88801496 88801598 -6471053 - PB1D10 SINE Alu -3 114 4 7 1262 293 402 0 0 chr17 88801936 88802048 -6470603 + B1F SINE Alu 2 113 -36 7 1262 213 261 174 0 chr17 88802269 88802338 -6470313 + ID4_ SINE ID 2 82 -1 7 1262 559 253 43 33 chr17 88803250 88803434 -6469217 - ID_B1 SINE B4 -37 187 2 7 1262 330 239 57 0 chr17 88803463 88803551 -6469100 - ID_B1 SINE B4 -4 220 128 7 1262 216 0 0 0 chr17 88803598 88803622 -6469029 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 7 1262 477 259 70 0 chr17 88804632 88804775 -6467876 + RSINE1 SINE B4 10 162 -3 7 1262 1217 97 54 0 chr17 88804888 88805073 -6467578 + B2_Mm2 SINE B2 1 195 0 7 1262 1190 48 7 0 chr17 88805087 88805233 -6467418 + B1_Mm SINE Alu 1 147 0 7 1262 528 16 0 0 chr17 88805244 88805305 -6467346 + (GGA)n Simple_repeat Simple_repeat 3 63 0 7 1262 230 143 20 0 chr17 88805446 88805495 -6467156 + CT-rich Low_complexity Low_complexity 2 51 0 7 1262 461 265 10 0 chr17 88805860 88805958 -6466693 - PB1D7 SINE Alu -9 111 13 7 1262 266 263 0 0 chr17 88805962 88806019 -6466632 - B1F1 SINE Alu -87 62 6 7 1262 733 159 27 3 chr17 88806098 88806332 -6466319 + (TCTA)n Simple_repeat Simple_repeat 1 239 0 7 1262 347 89 22 0 chr17 88806271 88806362 -6466289 + (TATG)n Simple_repeat Simple_repeat 1 93 0 7 1262 299 216 22 11 chr17 88806362 88806389 -6466262 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 7 1262 248 191 0 0 chr17 88806393 88806435 -6466216 - ID4 SINE ID -17 66 25 7 1262 207 257 50 75 chr17 88806718 88806798 -6465853 - MIRb SINE MIR -31 237 160 7 1262 272 323 7 86 chr17 88806866 88806944 -6465707 - ID_B1 SINE B4 -1 223 157 7 1262 851 186 0 0 chr17 88806944 88807084 -6465567 - B1_Mus1 SINE Alu -8 140 1 7 1262 272 323 7 86 chr17 88807084 88807144 -6465507 - ID_B1 SINE B4 -68 156 96 7 1262 3110 105 2 2 chr17 88807274 88807694 -6464957 + MTC LTR MaLR 2 421 0 7 1262 391 304 132 38 chr17 88807694 88807896 -6464755 + B4A SINE B4 70 291 -1 7 1262 763 156 0 12 chr17 88807896 88808058 -6464593 + (CA)n Simple_repeat Simple_repeat 1 160 0 7 1262 282 143 0 0 chr17 88808243 88808306 -6464345 + (GA)n Simple_repeat Simple_repeat 1 63 0 7 1262 292 238 122 56 chr17 88808314 88808421 -6464230 + PB1D10 SINE Alu 3 116 -1 8 1262 203 122 39 39 chr17 88808479 88808530 -6464121 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 8 1262 405 239 144 28 chr17 88808637 88808685 -6463966 - Lx9 LINE L1 -158 7486 7439 8 1262 198 0 0 0 chr17 88808685 88808707 -6463944 + (TC)n Simple_repeat Simple_repeat 2 23 0 8 1262 408 20 0 0 chr17 88808707 88808755 -6463896 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 1262 405 239 144 28 chr17 88808755 88808886 -6463765 - Lx9 LINE L1 -206 7438 7288 8 1262 1300 192 103 0 chr17 88808890 88809151 -6463500 + MTD LTR MaLR 1 288 -131 8 1262 357 192 8 16 chr17 88809173 88809300 -6463351 + G-rich Low_complexity Low_complexity 5 130 0 8 1262 393 202 33 11 chr17 88809304 88809394 -6463257 + MTD LTR MaLR 330 421 0 8 1262 474 244 15 30 chr17 88809400 88809531 -6463120 - Lx9 LINE L1 -373 7271 7143 8 1262 258 160 0 0 chr17 88809531 88809581 -6463070 + T-rich Low_complexity Low_complexity 1 50 0 8 1262 231 173 122 12 chr17 88809652 88809734 -6462917 - L1M2 LINE L1 -3308 2835 2745 8 1262 308 273 0 0 chr17 88810721 88810798 -6461853 + PB1D10 SINE Alu 27 103 -14 8 1262 6200 77 12 20 chr17 88810954 88811056 -6461595 - L1VL2 LINE L1 -1789 1826 1726 8 1262 1362 100 10 16 chr17 88811056 88811249 -6461402 - B2_Mm1t SINE B2 0 193 2 8 1262 6200 69 24 10 chr17 88811249 88812648 -6460003 - L1VL2 LINE L1 -1890 1725 308 8 1262 3283 236 58 20 chr17 88812647 88813447 -6459204 - Lx9 LINE L1 -484 7160 6331 8 1262 420 55 0 0 chr17 88813884 88813939 -6458712 + (TG)n Simple_repeat Simple_repeat 2 56 0 8 1262 309 217 14 0 chr17 88814589 88814658 -6457993 - MER45C DNA Tip100 0 953 884 8 1262 496 252 24 0 chr17 88814707 88814834 -6457817 + B1_Mur1 SINE Alu 20 149 0 8 1262 280 277 112 41 chr17 88814873 88814971 -6457680 + PB1 SINE Alu 13 117 -10 8 1262 2457 227 53 72 chr17 88815083 88815886 -6456765 + RLTR40 LTR ERVK 25 812 -5 8 1262 795 271 22 6 chr17 88815890 88816072 -6456579 + B4 SINE B4 92 276 -16 8 1262 2200 66 56 62 chr17 88816104 88816426 -6456225 - ORR1A2 LTR MaLR -3 324 5 8 1262 24 0 0 0 chr17 88816433 88816457 -6456194 + AT_rich Low_complexity Low_complexity 1 24 0 8 1262 633 218 170 0 chr17 88816520 88816685 -6455966 + MTEa LTR MaLR 1 193 -186 8 1262 1861 237 50 9 chr17 88816698 88817162 -6455489 + RLTR16 LTR ERVK 1 483 -22 8 1262 1862 149 99 48 chr17 88817279 88817320 -6455331 - MTC LTR MaLR -6 415 385 8 1262 191 32 0 61 chr17 88817320 88817353 -6455298 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8 1262 1862 149 99 48 chr17 88817353 88817618 -6455033 - MTC LTR MaLR -37 384 87 8 1262 1092 52 0 29 chr17 88817618 88817758 -6454893 + B1_Mus2 SINE Alu 2 137 -10 8 1262 252 0 0 0 chr17 88817758 88817786 -6454865 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 8 1262 1862 149 99 48 chr17 88817786 88817872 -6454779 - MTC LTR MaLR -335 86 2 8 1262 483 247 12 71 chr17 88817872 88818035 -6454616 + MTEa LTR MaLR 199 351 -28 8 1262 853 103 30 20 chr17 88818625 88818926 -6453725 + (CCAA)n Simple_repeat Simple_repeat 1 304 0 8 1262 1739 126 12 81 chr17 88818927 88819273 -6453378 - RLTRETN_Mm LTR ERVK 0 322 1 8 1262 270 0 0 0 chr17 88819289 88819319 -6453332 + (TAAAAA)n Simple_repeat Simple_repeat 5 34 0 8 1262 1228 153 14 5 chr17 88819319 88819535 -6453116 - MMETn-int LTR ERVK -16 4828 4611 8 1262 369 152 39 26 chr17 88819571 88819726 -6452925 + (CAAA)n Simple_repeat Simple_repeat 3 159 0 8 1262 716 360 111 71 chr17 88819749 88820550 -6452101 - MER45C DNA Tip100 -64 889 57 8 1262 408 255 49 0 chr17 88820550 88820652 -6451999 + RSINE1 SINE B4 3 109 -56 8 1262 460 50 0 0 chr17 88821219 88821279 -6451372 + B1_Mur4 SINE Alu 80 139 -11 8 1262 411 73 0 0 chr17 88821279 88821334 -6451317 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 8 1262 342 250 130 53 chr17 88821369 88821500 -6451151 + ID_B1 SINE B4 84 224 0 8 1262 479 162 50 20 chr17 88821512 88821613 -6451038 + PB1D9 SINE Alu 2 105 -15 8 1262 186 43 0 0 chr17 88821616 88821639 -6451012 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 8 1262 205 271 0 17 chr17 88821768 88821828 -6450823 + CT-rich Low_complexity Low_complexity 2 60 0 8 1262 23 0 0 0 chr17 88821828 88821851 -6450800 + AT_rich Low_complexity Low_complexity 1 23 0 8 1262 1284 170 38 52 chr17 88821853 88822144 -6450507 - Lx7 LINE L1 0 7696 7410 8 1262 358 188 60 48 chr17 88822146 88822230 -6450421 + B1_Mus2 SINE Alu 63 147 0 8 1262 225 182 0 43 chr17 88822268 88822314 -6450337 - Lx6 LINE L1 -311 7149 7106 8 1262 22 56 0 0 chr17 88822332 88822368 -6450283 + AT_rich Low_complexity Low_complexity 1 36 0 8 1262 781 208 98 6 chr17 88822368 88822542 -6450109 - Lx7 LINE L1 -329 7367 7178 8 1262 335 145 48 0 chr17 88822546 88822629 -6450022 + C-rich Low_complexity Low_complexity 5 91 0 8 1262 846 210 108 0 chr17 88822677 88822872 -6449779 - L1_Mur3 LINE L1 -702 5178 4963 8 1262 8745 139 75 28 chr17 88822910 88823152 -6449499 - L1_Mur3 LINE L1 -1215 4665 4436 8 1262 234 0 0 0 chr17 88823158 88823184 -6449467 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 8 1262 1152 62 0 7 chr17 88823184 88823324 -6449327 - B1_Mus1 SINE Alu -8 140 1 8 1262 8745 139 75 28 chr17 88823324 88824225 -6448426 - L1_Mur3 LINE L1 -1445 4435 3486 8 1262 360 0 0 0 chr17 88824225 88824265 -6448386 + (TATG)n Simple_repeat Simple_repeat 2 41 0 8 1262 8745 139 75 28 chr17 88824265 88824700 -6447951 - L1_Mur3 LINE L1 -2395 3485 3043 8 1262 1466 152 9 0 chr17 88824700 88824924 -6447727 - URR1A DNA MER1_type 0 226 1 8 1262 8745 214 60 92 chr17 88824924 88824984 -6447667 - L1_Mur3 LINE L1 -2836 3050 2952 8 1262 1126 20 41 0 chr17 88824984 88825131 -6447520 + B2_Mm2 SINE B2 1 153 -42 8 1262 291 54 0 0 chr17 88825134 88825171 -6447480 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 1262 8427 244 54 117 chr17 88825171 88825248 -6447403 - L1_Mur3 LINE L1 -2924 2962 2922 8 1262 383 90 355 0 chr17 88825248 88825358 -6447293 - B2_Mm2 SINE B2 0 195 47 8 1262 8427 244 54 117 chr17 88825358 88825405 -6447246 - L1_Mur3 LINE L1 -2924 2921 2896 8 1262 1046 104 39 50 chr17 88825405 88825587 -6447064 - B2_Mm2 SINE B2 -14 181 2 8 1262 8427 244 54 117 chr17 88825587 88825613 -6447038 - L1_Mur3 LINE L1 -2991 2895 2870 8 1262 1195 54 7 0 chr17 88825613 88825760 -6446891 + B1_Mus1 SINE Alu 1 148 0 8 1262 8585 140 42 24 chr17 88825760 88826478 -6446173 - L1_Mur3 LINE L1 -3007 2873 2162 8 1262 2253 149 61 3 chr17 88826478 88826855 -6445796 + RLTR9D LTR ERVK 2 400 -3 8 1262 8585 138 42 23 chr17 88826855 88826956 -6445695 - L1_Mur3 LINE L1 -3719 2161 2072 8 1262 285 29 0 0 chr17 88826956 88826990 -6445661 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 1262 8585 133 38 21 chr17 88826990 88827836 -6444815 - L1_Mur3 LINE L1 -3809 2071 1186 8 1262 252 86 0 0 chr17 88827836 88827871 -6444780 + (TC)n Simple_repeat Simple_repeat 1 35 0 8 1262 220 163 41 0 chr17 88827875 88827924 -6444727 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 8 1262 2606 86 99 0 chr17 88827935 88828118 -6444533 + BGLII_Mus LTR ERVK 1 190 -232 8 1262 369 0 0 0 chr17 88828118 88828159 -6444492 + (GA)n Simple_repeat Simple_repeat 1 41 0 8 1262 2606 86 99 0 chr17 88828159 88828359 -6444292 + BGLII_Mus LTR ERVK 191 420 -2 8 1262 376 136 0 0 chr17 88828376 88828435 -6444216 - PB1D9 SINE Alu -59 61 3 8 1262 1309 175 157 21 chr17 88828436 88828917 -6443734 - L1_Mur3 LINE L1 -6541 1187 267 8 1262 482 275 15 0 chr17 88829013 88829144 -6443507 - ID_B1 SINE B4 -6 218 86 8 1262 685 266 94 12 chr17 88829312 88829556 -6443095 + MTD LTR MaLR 1 264 -155 8 1262 628 291 117 12 chr17 88830051 88830385 -6442266 - L2a LINE L2 -1 3425 3057 8 1262 383 211 11 0 chr17 88830405 88830500 -6442151 + (TA)n Simple_repeat Simple_repeat 2 97 0 8 1262 362 258 67 22 chr17 88830544 88830679 -6441972 - L2a LINE L2 -499 2920 2780 8 1262 730 179 45 0 chr17 88830688 88830822 -6441829 + B1_Mur1 SINE Alu 10 149 0 8 1262 214 317 29 19 chr17 88830869 88830972 -6441679 - L2a LINE L2 -680 2739 2636 8 1262 660 281 55 37 chr17 88831723 88831941 -6440710 - ID_B1 SINE B4 -1 223 2 8 1262 397 224 122 0 chr17 88832014 88832112 -6440539 - RSINE1 SINE B4 -36 129 20 8 1262 231 287 66 44 chr17 88832199 88832290 -6440361 + RSINE1 SINE B4 44 136 -29 8 1262 450 0 0 0 chr17 88832302 88832352 -6440299 + (CA)n Simple_repeat Simple_repeat 2 51 0 8 1262 300 111 0 0 chr17 88832760 88832805 -6439846 + (A)n Simple_repeat Simple_repeat 1 45 0 8 1262 883 220 131 33 chr17 88832886 88833215 -6439436 + MER31A LTR ERV1 3 363 -122 8 1262 965 33 0 8 chr17 88833217 88833339 -6439312 + (TTC)n Simple_repeat Simple_repeat 2 122 0 8 1262 186 43 0 0 chr17 88833344 88833367 -6439284 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 8 1262 1272 31 0 0 chr17 88833367 88833526 -6439125 - B2_Mm1a SINE B2 -33 160 2 8 1262 230 324 14 14 chr17 88833537 88833606 -6439045 + MER31A LTR ERV1 369 437 -48 8 1262 666 236 7 20 chr17 88833626 88833773 -6438878 + RSINE1 SINE B4 2 146 -19 8 1262 647 156 132 8 chr17 88833875 88834004 -6438647 - B1_Mur3 SINE Alu 0 149 5 8 1262 298 248 18 106 chr17 88833910 88834023 -6438628 - MT2B LTR ERVL -350 251 149 8 1262 219 376 59 0 chr17 88834075 88834160 -6438491 - B1F SINE Alu -58 91 2 8 1262 513 260 0 0 chr17 88834183 88834352 -6438299 + (TA)n Simple_repeat Simple_repeat 2 170 0 8 1262 853 225 41 6 chr17 88834353 88834523 -6438128 - B3A SINE B2 -18 180 5 8 1262 490 296 14 40 chr17 88835229 88835377 -6437274 + RSINE1 SINE B4 5 148 -17 8 1262 334 362 7 7 chr17 88835963 88836105 -6436546 - B1F2 SINE Alu -7 142 1 8 1262 730 191 56 36 chr17 88836131 88836327 -6436324 - RLTR17 LTR ERVK -322 370 171 8 1262 214 230 0 75 chr17 88836336 88836354 -6436297 + T-rich Low_complexity Low_complexity 57 74 0 8 1262 1181 48 0 26 chr17 88836354 88836505 -6436146 - B1_Mus2 SINE Alu 0 147 1 8 1262 214 230 0 75 chr17 88836505 88836566 -6436085 + T-rich Low_complexity Low_complexity 2 56 0 8 1262 276 233 0 0 chr17 88836641 88836701 -6435950 + RMER15 LTR ERVL 1 60 -515 8 1262 1320 248 152 41 chr17 88836735 88837223 -6435428 + RMER15 LTR ERVL 34 575 0 8 1262 910 130 20 7 chr17 88837902 88837913 -6434738 - B1_Mur3 SINE Alu 0 149 139 8 1262 198 0 0 0 chr17 88837913 88837935 -6434716 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 8 1262 910 130 20 7 chr17 88837935 88838070 -6434581 - B1_Mur3 SINE Alu -11 138 1 8 1262 321 275 66 0 chr17 88838759 88838850 -6433801 - ID_B1 SINE B4 -48 176 80 8 1262 1151 54 0 7 chr17 88838884 88839033 -6433618 - B1_Mus1 SINE Alu 0 148 1 8 1262 260 254 0 0 chr17 88839039 88839110 -6433541 - B1F SINE Alu -47 102 32 8 1262 251 237 101 20 chr17 88839235 88839334 -6433317 + MER53 DNA hAT 86 192 -1 8 1262 233 277 25 57 chr17 88839920 88840077 -6432574 + (CGGGG)n Simple_repeat Simple_repeat 3 154 0 8 1262 249 241 0 0 chr17 88840009 88840063 -6432588 + G-rich Low_complexity Low_complexity 1 54 0 8 1262 189 0 0 0 chr17 88840240 88840261 -6432390 + (CGCGG)n Simple_repeat Simple_repeat 1 21 0 8 1262 26 0 0 0 chr17 88840650 88840676 -6431975 + GC_rich Low_complexity Low_complexity 1 26 0 8 1262 216 0 0 0 chr17 88840808 88840832 -6431819 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 8 1262 234 0 0 0 chr17 88842348 88842374 -6430277 + (TG)n Simple_repeat Simple_repeat 2 27 0 8 1262 280 229 14 41 chr17 88842374 88842447 -6430204 - PB1D7 SINE Alu -9 111 41 8 1262 1164 41 7 7 chr17 88842490 88842638 -6430013 - B1_Mus1 SINE Alu 0 148 1 9 1262 634 193 29 15 chr17 88842639 88842776 -6429875 - B1_Mur2 SINE Alu 0 149 11 9 1262 438 307 88 0 chr17 88842804 88842941 -6429710 - ID_B1 SINE B4 -1 223 75 9 1262 25 0 0 0 chr17 88842978 88843003 -6429648 + AT_rich Low_complexity Low_complexity 1 25 0 9 1262 659 152 0 33 chr17 88843429 88843551 -6429100 - B1_Mus1 SINE Alu -21 127 10 9 1262 1077 48 0 125 chr17 88844554 88844722 -6427929 - B1_Mus2 SINE Alu 0 147 1 9 1262 330 275 86 2 chr17 88844864 88845026 -6427625 - L1MC3 LINE L1 -88 7697 7551 9 1262 353 243 134 7 chr17 88845036 88845273 -6427378 - L1MC3 LINE L1 -356 7639 7322 9 1262 438 118 0 31 chr17 88845724 88845820 -6426831 + (TG)n Simple_repeat Simple_repeat 1 93 0 9 1262 287 250 24 24 chr17 88845825 88845907 -6426744 - ID_B1 SINE B4 -40 184 103 9 1262 746 247 40 17 chr17 88845997 88846170 -6426481 - B3A SINE B2 -19 179 3 9 1262 232 345 35 26 chr17 88846432 88846548 -6426103 - PB1D10 SINE Alu 0 117 1 9 1262 305 158 303 0 chr17 88846653 88846729 -6425922 - PB1D9 SINE Alu 0 120 22 9 1262 251 238 48 0 chr17 88846991 88847054 -6425597 - B2_Mm2 SINE B2 -127 68 3 9 1262 329 271 0 0 chr17 88847719 88847804 -6424847 - ID_B1 SINE B4 -4 220 136 9 1262 216 0 0 0 chr17 88847834 88847858 -6424793 + (TG)n Simple_repeat Simple_repeat 2 25 0 9 1262 1718 132 88 41 chr17 88847858 88848198 -6424453 - RLTR15 LTR ERVK -3 356 1 9 1262 248 0 0 30 chr17 88849531 88849564 -6423087 + (TTA)n Simple_repeat Simple_repeat 2 33 0 9 1262 3357 25 8 8 chr17 88849730 88850126 -6422525 - MTA_Mm LTR MaLR 0 396 1 9 1262 210 136 0 0 chr17 88850194 88850238 -6422413 + (A)n Simple_repeat Simple_repeat 1 44 0 9 1262 366 278 11 0 chr17 88850327 88850417 -6422234 - B3 SINE B2 -124 92 2 9 1262 784 139 35 71 chr17 88850547 88850717 -6421934 - ORR1C2 LTR MaLR 0 384 221 9 1262 291 180 0 0 chr17 88850755 88850805 -6421846 - B1_Mus2 SINE Alu -74 73 24 9 1262 315 71 0 0 chr17 88851038 88851080 -6421571 + (TG)n Simple_repeat Simple_repeat 1 42 0 9 1262 224 158 0 0 chr17 88851080 88851118 -6421533 - B3 SINE B2 -101 115 78 9 1262 33530 74 6 23 chr17 88851182 88856390 -6416261 + L1Md_F2 LINE L1 469 5585 -298 9 1262 7758 59 21 4 chr17 88856391 88857370 -6415281 + L1Md_F2 LINE L1 5587 6582 0 9 1262 30 45 0 0 chr17 88857447 88857491 -6415160 + AT_rich Low_complexity Low_complexity 1 44 0 9 1262 243 0 0 0 chr17 88857856 88857883 -6414768 + (TG)n Simple_repeat Simple_repeat 1 27 0 9 1262 304 257 50 0 chr17 88858693 88858794 -6413857 - U13_ snRNA snRNA 0 108 3 9 1262 420 263 8 26 chr17 88859403 88859520 -6413131 + ID_B1 SINE B4 58 172 -52 9 1262 343 275 0 32 chr17 88859443 88859537 -6413114 + PB1D10 SINE Alu 15 105 -12 9 1262 964 79 57 7 chr17 88859606 88859746 -6412905 - B1_Mus1 SINE Alu 0 148 2 9 1262 210 191 0 0 chr17 88860552 88860599 -6412052 + (TG)n Simple_repeat Simple_repeat 1 47 0 9 1262 334 247 12 24 chr17 88860601 88860684 -6411967 - B1_Mus1 SINE Alu -56 92 11 9 1262 854 240 52 38 chr17 88860809 88861021 -6411630 - B3 SINE B2 0 216 2 9 1262 1721 21 0 0 chr17 88861548 88861741 -6410910 + B2_Mm1t SINE B2 1 193 0 9 1262 562 155 33 49 chr17 88861770 88861892 -6410759 + PB1D7 SINE Alu 1 120 0 9 1262 240 35 0 0 chr17 88861901 88861930 -6410721 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 1262 617 163 47 39 chr17 88862961 88863089 -6409562 - B1_Mur4 SINE Alu -20 130 2 9 1262 594 289 15 35 chr17 88863092 88863289 -6409362 - B3A SINE B2 -5 193 1 9 1262 525 154 0 0 chr17 88863326 88863417 -6409234 + (TA)n Simple_repeat Simple_repeat 2 92 0 9 1262 562 196 112 8 chr17 88863899 88864033 -6408618 - B1_Mus1 SINE Alu 0 148 1 9 1262 205 289 35 35 chr17 88864102 88864188 -6408463 + L2 LINE L2 2280 2365 -1054 9 1262 180 350 12 0 chr17 88864304 88864384 -6408267 - MIR3 SINE MIR -23 185 105 9 1262 603 160 8 16 chr17 88864405 88864526 -6408125 + URR1B DNA MER1_type 106 225 0 9 1262 757 147 93 0 chr17 88864602 88864731 -6407920 - B1_Mur4 SINE Alu -8 142 2 9 1262 423 119 0 0 chr17 88865256 88865323 -6407328 + (TCCC)n Simple_repeat Simple_repeat 4 70 0 9 1262 242 290 14 0 chr17 88865325 88865394 -6407257 - ID_B1 SINE B4 -1 223 154 9 1262 964 143 0 0 chr17 88865563 88865710 -6406941 + B1_Mus1 SINE Alu 2 148 0 9 157 1327 206 127 45 chr17 88866429 88866856 -6405795 - RLTR20B3 LTR ERVK -20 557 96 9 1263 1896 240 51 30 chr17 88866969 88867463 -6405188 + RLTR20D LTR ERVK 65 568 0 9 1263 483 228 79 29 chr17 88867758 88867898 -6404753 + ORR1D2 LTR MaLR 5 151 -219 9 1263 8360 139 22 23 chr17 88867902 88868032 -6404619 + Lx LINE L1 4478 4590 -1293 9 1263 1196 41 0 20 chr17 88868032 88868182 -6404469 - B1_Mus2 SINE Alu 0 147 1 9 1263 8360 118 21 19 chr17 88868182 88870219 -6402432 + Lx LINE L1 4591 6651 -3 9 1263 392 221 128 52 chr17 88870238 88870410 -6402241 + ORR1D2 LTR MaLR 143 327 -47 9 1263 1514 164 66 27 chr17 88870420 88870752 -6401899 - ORR1D1 LTR MaLR -29 345 1 9 1263 735 116 0 0 chr17 88870776 88870888 -6401763 + (TCTA)n Simple_repeat Simple_repeat 1 112 0 9 1263 741 188 23 0 chr17 88870890 88871023 -6401628 - B1_Mur1 SINE Alu -9 140 5 9 1263 694 252 86 15 chr17 88871034 88871231 -6401420 - B3 SINE B2 -5 211 1 9 1263 233 257 0 63 chr17 88871234 88871313 -6401338 - B1F2 SINE Alu -74 75 2 9 1263 1456 174 27 27 chr17 88871489 88871790 -6400861 - RMER15 LTR ERVL -79 496 196 9 1263 678 130 0 0 chr17 88871820 88871928 -6400723 + (TC)n Simple_repeat Simple_repeat 1 108 0 9 1263 225 0 0 0 chr17 88871938 88871963 -6400688 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 9 1263 1134 83 0 7 chr17 88871963 88872099 -6400552 - B1_Mm SINE Alu -10 137 2 9 1263 538 234 14 0 chr17 88872099 88872240 -6400411 - RMER15 LTR ERVL -419 156 14 9 1263 218 224 0 0 chr17 88872334 88872383 -6400268 - ID_B1 SINE B4 -90 134 86 9 1263 756 100 4 6 chr17 88872742 88872883 -6399768 - B1_Mm SINE Alu -187 127 1 9 1263 365 286 0 112 chr17 88873763 88873794 -6398857 - B1F2 SINE Alu -7 142 123 9 1263 207 114 0 0 chr17 88873794 88873829 -6398822 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 9 1263 365 286 0 112 chr17 88873829 88873931 -6398720 - B1F2 SINE Alu -27 122 24 9 1263 223 321 7 64 chr17 88873853 88873993 -6398658 - ID_B1 SINE B4 -45 179 48 9 1263 339 252 112 37 chr17 88874525 88874686 -6397965 - B3A SINE B2 -25 173 1 9 1263 300 343 0 10 chr17 88874937 88875037 -6397614 + RSINE1 SINE B4 27 125 -40 9 1263 22 35 0 0 chr17 88875604 88875633 -6397018 + AT_rich Low_complexity Low_complexity 1 29 0 9 1263 2101 121 30 115 chr17 88875669 88876138 -6396513 - RLTR23 LTR ERV1 0 430 2 9 1263 327 329 89 41 chr17 88876341 88876655 -6395996 - RLTR4_MM-int LTR ERV1 -229 7372 7044 9 1263 720 175 0 0 chr17 88877303 88877423 -6395228 + PB1D9 SINE Alu 1 120 0 9 1263 28 0 0 0 chr17 88877644 88877672 -6394979 + AT_rich Low_complexity Low_complexity 1 28 0 9 1263 1336 98 11 0 chr17 88877672 88877855 -6394796 - B2_Mm2 SINE B2 -9 186 2 9 1263 937 68 264 7 chr17 88879098 88879246 -6393405 - B2_Mm2 SINE B2 -8 187 2 9 1263 599 194 64 14 chr17 88879505 88879646 -6393005 - B1F2 SINE Alu -1 148 1 9 1263 305 270 188 28 chr17 88879804 88880173 -6392478 - L1_Mur3 LINE L1 -13 5867 5424 9 1263 585 181 216 6 chr17 88880210 88880377 -6392274 - ID_B1 SINE B4 -20 204 3 9 1263 308 290 104 37 chr17 88880419 88880688 -6391963 - L1_Mur3 LINE L1 -592 5288 5002 9 1263 531 0 0 0 chr17 88881417 88881476 -6391175 + (GA)n Simple_repeat Simple_repeat 1 59 0 9 1263 478 272 130 5 chr17 88881477 88881662 -6390989 + B4A SINE B4 16 223 -69 9 1263 451 220 10 29 chr17 88881676 88881779 -6390872 + B3 SINE B2 111 211 -5 9 1263 216 0 0 0 chr17 88881843 88881867 -6390784 + (T)n Simple_repeat Simple_repeat 1 24 0 9 1263 1133 61 0 7 chr17 88882123 88882271 -6390380 + B1_Mus2 SINE Alu 1 147 0 9 1263 30 0 0 0 chr17 88882399 88882429 -6390222 + AT_rich Low_complexity Low_complexity 1 30 0 9 1263 240 59 0 0 chr17 88882750 88882784 -6389867 + (TTG)n Simple_repeat Simple_repeat 1 34 0 9 1263 1224 28 0 0 chr17 88882785 88882926 -6389725 - B1_Mus2 SINE Alu -6 141 1 9 1263 225 0 0 0 chr17 88883378 88883403 -6389248 + (TG)n Simple_repeat Simple_repeat 2 26 0 9 1263 353 197 0 26 chr17 88883445 88883523 -6389128 - B1_Mur1 SINE Alu 0 149 74 9 1263 312 117 17 0 chr17 88883968 88884028 -6388623 - Lx4A LINE L1 -3 7055 6995 9 1263 213 211 0 95 chr17 88884506 88884569 -6388082 + ID2 SINE ID 25 81 -2 9 1263 282 196 20 61 chr17 88884924 88885022 -6387629 + T-rich Low_complexity Low_complexity 2 95 0 9 1263 189 0 0 0 chr17 88886349 88886370 -6386281 + (CGGA)n Simple_repeat Simple_repeat 1 21 0 9 1263 189 0 0 0 chr17 88888898 88888919 -6383732 + (T)n Simple_repeat Simple_repeat 1 21 0 9 1263 382 265 104 15 chr17 88889926 88890060 -6382591 - RSINE1 SINE B4 -3 162 17 9 1263 298 252 45 31 chr17 88890085 88890200 -6382451 - PB1D10 SINE Alu -1 119 1 9 1263 315 0 0 0 chr17 88890215 88890250 -6382401 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 1263 227 320 82 10 chr17 88890322 88890420 -6382231 + L1M3 LINE L1 5552 5656 -515 9 1263 727 220 137 0 chr17 88891211 88891393 -6381258 - B3 SINE B2 -8 208 2 9 1263 2764 153 11 89 chr17 88891457 88892017 -6380634 - RMER20A LTR ERVK 0 516 1 1 1263 592 265 17 40 chr17 88892017 88892190 -6380461 - B3 SINE B2 -47 169 1 1 1263 443 260 75 48 chr17 88892212 88892398 -6380253 - B3 SINE B2 -25 191 1 1 1263 186 43 0 0 chr17 88892462 88892485 -6380166 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 1 1263 758 214 0 0 chr17 88892485 88892623 -6380028 - B1_Mur4 SINE Alu -8 142 5 1 1263 210 37 0 0 chr17 88894497 88894524 -6378127 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 1263 444 271 0 4 chr17 88895083 88895197 -6377454 + B1F SINE Alu 9 120 0 1 1263 828 139 0 0 chr17 88895558 88895730 -6376921 + (TAGG)n Simple_repeat Simple_repeat 1 172 0 1 1263 868 273 126 24 chr17 88896371 88896743 -6375908 + MLT1D LTR MaLR 28 437 -68 1 1263 209 244 0 0 chr17 88897008 88897054 -6375597 + polypurine Low_complexity Low_complexity 1 46 0 1 1263 213 154 0 0 chr17 88897157 88897196 -6375455 + G-rich Low_complexity Low_complexity 4 42 0 1 1263 344 209 70 0 chr17 88897316 88897402 -6375249 + MTEa LTR MaLR 284 375 -4 1 1263 310 287 92 35 chr17 88897998 88898139 -6374512 - B1F1 SINE Alu 0 149 1 1 1263 793 212 0 0 chr17 88898421 88898567 -6374084 - B1_Mus2 SINE Alu -1 146 1 1 1263 240 122 0 0 chr17 88898723 88898764 -6373887 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 1 1263 1362 99 5 16 chr17 88898786 88898980 -6373671 + B2_Mm1t SINE B2 2 193 0 1 1263 1258 48 0 0 chr17 88899736 88899883 -6372768 + B1_Mus2 SINE Alu 1 147 0 1 1263 592 234 31 15 chr17 88899977 88900107 -6372544 - B3 SINE B2 -7 209 78 1 1263 2667 34 2 224 chr17 88900141 88900640 -6372011 + RLTR10 LTR ERVK 1 388 -2 1 1263 8210 46 7 6 chr17 88900687 88901674 -6370977 + RLTR10-int LTR ERVK 11 998 -989 1 1263 333 256 62 39 chr17 88901738 88901868 -6370783 + RLTR10-int LTR ERVK 1462 1594 -5987 1 1263 8865 21 0 0 chr17 88901950 88902930 -6369721 + RLTR10-int LTR ERVK 990 1969 -18 1 1263 530 77 0 25 chr17 88902930 88902947 -6369704 - RLTR10 LTR ERVK -312 78 63 1 1263 2700 31 2 224 chr17 88902947 88903446 -6369205 + RLTR10 LTR ERVK 1 388 -2 1 1263 530 77 0 25 chr17 88903446 88903508 -6369143 - RLTR10 LTR ERVK -328 62 1 1 1263 275 365 121 74 chr17 88903773 88904004 -6368647 + MLT1J LTR MaLR 222 463 -49 1 1263 363 320 133 94 chr17 88903998 88904456 -6368195 + MER20B DNA MER1_type 24 499 -284 1 1263 310 267 21 32 chr17 88905667 88905760 -6366891 - BC1_Mm scRNA scRNA -45 107 16 1 1263 846 143 64 0 chr17 88905864 88906004 -6366647 - B1_Mur4 SINE Alu -1 149 1 1 1263 386 160 83 130 chr17 88905908 88906016 -6366635 - MT2B LTR ERVL -344 257 155 1 1263 21 0 0 0 chr17 88906020 88906041 -6366610 + AT_rich Low_complexity Low_complexity 1 21 0 1 1263 29 0 0 0 chr17 88906102 88906131 -6366520 + GC_rich Low_complexity Low_complexity 1 29 0 1 1263 790 280 207 68 chr17 88906136 88906668 -6365983 - RLTR18 LTR ERVK -7 609 4 1 1263 411 284 17 17 chr17 88906668 88906786 -6365865 - RSINE1 SINE B4 -45 120 3 1 1263 449 290 9 0 chr17 88906788 88906895 -6365756 - PB1D10 SINE Alu 0 117 10 1 1263 239 148 0 69 chr17 88907090 88907130 -6365521 + T-rich Low_complexity Low_complexity 16 54 0 1 1263 1232 48 0 0 chr17 88907130 88907275 -6365376 - B1_Mus2 SINE Alu -2 145 1 1 1263 239 148 0 69 chr17 88907275 88907292 -6365359 + T-rich Low_complexity Low_complexity 1 15 0 1 1263 360 0 0 0 chr17 88907757 88907797 -6364854 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 1263 208 321 108 39 chr17 88908057 88908316 -6364335 + L2 LINE L2 2553 2829 -590 1 1263 1571 43 0 5 chr17 88909029 88909214 -6363437 - B2_Mm1t SINE B2 -8 185 2 1 1263 593 61 12 0 chr17 88909356 88909438 -6363213 + (TC)n Simple_repeat Simple_repeat 2 84 0 1 1263 537 170 0 41 chr17 88909444 88909542 -6363109 - B1_Mur1 SINE Alu -38 111 18 1 1263 228 161 214 111 chr17 88909833 88909959 -6362692 + B1F2 SINE Alu 10 148 -1 1 1263 1242 57 0 0 chr17 88910936 88911095 -6361556 + (TTTC)n Simple_repeat Simple_repeat 2 160 0 1 1263 1213 35 0 0 chr17 88911097 88911238 -6361413 - B1_Mm SINE Alu -6 141 1 1 1263 299 269 97 40 chr17 88911303 88911427 -6361224 + ID_B1 SINE B4 92 222 -2 1 1263 501 62 0 0 chr17 88911932 88911997 -6360654 + (TC)n Simple_repeat Simple_repeat 1 65 0 1 1263 681 221 0 69 chr17 88912054 88912229 -6360422 + RSINE1 SINE B4 3 165 0 1 1263 275 310 207 11 chr17 88912282 88912562 -6360089 - L1ME2 LINE L1 -52 6112 5778 1 1263 228 212 0 0 chr17 88912624 88912690 -6359961 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 1263 1230 48 7 0 chr17 88912723 88912870 -6359781 - B1_Mus1 SINE Alu 0 148 1 1 1263 2257 135 34 0 chr17 88913206 88913561 -6359090 - ORR1B2 LTR MaLR 0 367 1 1 1263 688 235 108 32 chr17 88913847 88914032 -6358619 - B3 SINE B2 -2 214 16 1 1263 539 212 101 78 chr17 88914027 88914126 -6358525 - RMER15 LTR ERVL -117 458 351 1 1263 6533 62 5 2 chr17 88914126 88914932 -6357719 + RLTR13C2 LTR ERVK 1 808 0 1 1263 539 212 101 78 chr17 88914932 88915011 -6357640 - RMER15 LTR ERVL -225 350 276 1 1263 725 201 95 59 chr17 88915011 88915180 -6357471 - B3 SINE B2 -20 175 1 1 1263 590 232 18 85 chr17 88915210 88915375 -6357276 - RMER15 LTR ERVL -403 172 19 1 1263 1282 154 5 0 chr17 88915374 88915569 -6357082 - URR1B DNA MER1_type -29 196 1 1 1263 255 254 146 0 chr17 88915729 88915766 -6356885 - RMER21B LTR ERV1 -275 567 531 1 1263 2693 166 11 168 chr17 88915766 88916491 -6356160 + RMER19C LTR ERVK 1 611 0 1 1263 255 254 146 0 chr17 88916491 88916563 -6356088 - RMER21B LTR ERV1 -312 530 444 1 1263 260 324 28 0 chr17 88916708 88916779 -6355872 - MER63D DNA AcHobo -960 101 29 1 1263 831 305 24 12 chr17 88916962 88917214 -6355437 - MLT1D LTR MaLR -5 500 246 1 1263 1845 171 116 19 chr17 88917286 88917738 -6354913 + RMER5 LTR ERV1 13 534 0 1 1263 1652 148 4 0 chr17 88917850 88918121 -6354530 - L1_Mur2 LINE L1 -569 5308 5037 1 1263 1348 223 46 3 chr17 88918120 88918404 -6354247 + Lx5 LINE L1 6516 6811 -239 1 1263 626 271 30 22 chr17 88918409 88918639 -6354012 - RLTR15 LTR ERVK -102 257 26 1 1263 1296 80 26 36 chr17 88918674 88918868 -6353783 - B2_Mm2 SINE B2 -1 194 3 1 1263 3339 150 19 39 chr17 88918868 88919464 -6353187 - MYSERV6-int LTR ERVK -20 8939 8356 1 1263 588 192 22 59 chr17 88919464 88919626 -6353025 - RMER4A LTR ERVK -67 518 251 1 1263 11092 201 55 39 chr17 88919626 88922053 -6350598 - MYSERV6-int LTR ERVK -1424 5126 2715 1 1263 374 0 22 0 chr17 88922053 88922099 -6350552 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 1 1263 1152 72 0 0 chr17 88922099 88922237 -6350414 - B1_Mm SINE Alu -9 138 1 1 1263 11092 168 49 22 chr17 88922237 88922659 -6349992 - MYSERV6-int LTR ERVK -6064 2895 2479 1 1263 471 130 0 0 chr17 88922659 88922736 -6349915 + (TA)n Simple_repeat Simple_repeat 1 77 0 1 1263 11092 168 49 22 chr17 88922736 88922818 -6349833 - MYSERV6-int LTR ERVK -6481 2478 2403 1 1263 1294 97 11 0 chr17 88922818 88922994 -6349657 + B2_Mm1t SINE B2 2 179 -14 1 1263 8437 271 68 75 chr17 88922994 88923041 -6349610 - MYSERV6-int LTR ERVK -4346 2204 2151 1 1263 327 157 0 39 chr17 88923041 88923108 -6349543 + B2_Mm2 SINE B2 47 109 -107 1 1263 225 0 0 0 chr17 88923118 88923143 -6349508 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 1263 8437 271 68 75 chr17 88923143 88923831 -6348820 - MYSERV6-int LTR ERVK -4414 2136 1405 1 1263 392 161 123 0 chr17 88924256 88924337 -6348314 - ORR1A4 LTR MaLR -238 91 1 1 1263 506 319 111 14 chr17 88924905 88925258 -6347393 + L1M3 LINE L1 5373 5759 -421 1 1263 331 231 12 25 chr17 88925296 88925376 -6347275 + PB1D10 SINE Alu 38 116 -1 1 1263 639 261 75 9 chr17 88925707 88925920 -6346731 + MER82 DNA MER2_type 16 242 -411 1 1263 461 32 0 31 chr17 88925925 88925989 -6346662 + (TCCC)n Simple_repeat Simple_repeat 3 64 0 1 1263 252 0 0 0 chr17 88925989 88926017 -6346634 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 1 1263 603 209 0 0 chr17 88926017 88926122 -6346529 - B1_Mur2 SINE Alu -12 137 33 1 1263 357 295 297 43 chr17 88926146 88926471 -6346180 + MER82 DNA MER2_type 246 651 -2 1 1263 324 70 0 0 chr17 88926609 88926652 -6345999 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1263 494 260 87 0 chr17 88926652 88926779 -6345872 - RSINE1 SINE B4 -24 141 4 1 1263 340 264 101 7 chr17 88926944 88927093 -6345558 - L1M5 LINE L1 -854 5292 5130 1 1263 1211 48 0 7 chr17 88927724 88927872 -6344779 + B1_Mus1 SINE Alu 2 148 0 1 1263 1152 69 56 0 chr17 88927891 88928051 -6344600 + B2_Mm1t SINE B2 11 179 -14 1 1263 315 159 0 39 chr17 88928098 88928165 -6344486 + B2_Mm2 SINE B2 47 109 -107 1 1263 243 0 0 0 chr17 88928230 88928257 -6344394 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1263 383 267 33 0 chr17 88928271 88928361 -6344290 - B1F SINE Alu -56 93 1 1 1263 468 250 213 16 chr17 88928412 88928534 -6344117 - B1_Mur1 SINE Alu -1 148 3 1 1263 22 56 0 0 chr17 88929540 88929576 -6343075 + GC_rich Low_complexity Low_complexity 1 36 0 1 1263 483 351 46 62 chr17 88930721 88931028 -6341623 - MARNA DNA Mariner -232 354 53 1 1263 276 200 0 0 chr17 88931404 88931464 -6341187 + (TCCA)n Simple_repeat Simple_repeat 4 63 0 1 1263 582 60 0 0 chr17 88931470 88931553 -6341098 + (TG)n Simple_repeat Simple_repeat 1 83 0 1 1263 1034 112 0 22 chr17 88931609 88931792 -6340859 + (TTC)n Simple_repeat Simple_repeat 1 179 0 1 1263 216 0 0 0 chr17 88931792 88931816 -6340835 + (TTCC)n Simple_repeat Simple_repeat 2 25 0 1 1263 419 152 0 12 chr17 88931816 88931896 -6340755 + CT-rich Low_complexity Low_complexity 2 80 0 1 1263 412 337 0 0 chr17 88931901 88931996 -6340655 - RSINE1 SINE B4 -69 96 2 1 1263 257 309 40 30 chr17 88932621 88932721 -6339930 - LTR84a LTR ERVL -10 747 647 1 1263 512 188 0 56 chr17 88932748 88932855 -6339796 + B1F SINE Alu 46 146 -3 1 1263 276 275 115 96 chr17 88932750 88932907 -6339744 + B4 SINE B4 133 292 0 1 1263 429 103 0 0 chr17 88932931 88932999 -6339652 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 1263 26 50 0 0 chr17 88933545 88933585 -6339066 + AT_rich Low_complexity Low_complexity 1 40 0 1 1263 732 82 8 68 chr17 88933585 88933702 -6338949 - B1_Mus1 SINE Alu 0 148 39 1 1263 264 158 52 17 chr17 88933651 88933709 -6338942 - 4.5SRNA scRNA scRNA -8 86 27 1 1263 701 240 87 96 chr17 88933722 88934045 -6338606 - Lx8 LINE L1 0 7473 7154 1 1263 1275 20 7 0 chr17 88934058 88934204 -6338447 - B1_Mus2 SINE Alu 0 147 1 1 1263 380 335 92 18 chr17 88934708 88934872 -6337779 + MER5A DNA MER1_type 1 176 -13 1 1263 336 289 55 68 chr17 88935760 88935923 -6336728 - RSINE1 SINE B4 -3 162 2 1 1263 386 264 54 9 chr17 88935937 88936048 -6336603 + MER3 DNA MER1_type 92 207 -2 1 1263 254 257 86 0 chr17 88936097 88936167 -6336484 - MER5A1 DNA MER1_type -41 125 50 1 1263 803 128 172 6 chr17 88936212 88936369 -6336282 - URR1A DNA MER1_type -43 183 1 1 1263 240 35 0 0 chr17 88937710 88937739 -6334912 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1 1263 494 204 11 0 chr17 88938015 88938103 -6334548 + ID_B1 SINE B4 123 211 -13 1 1263 331 278 22 0 chr17 88938243 88938333 -6334318 - MER58B DNA MER1_type 0 341 250 1 1263 265 43 21 42 chr17 88938464 88938512 -6334139 + (CAA)n Simple_repeat Simple_repeat 2 48 0 1 1263 611 259 70 61 chr17 88938548 88938762 -6333889 - B3 SINE B2 0 216 1 1 1263 370 304 96 22 chr17 88938908 88939137 -6333514 - B4A SINE B4 0 292 47 1 1263 522 261 7 35 chr17 88939170 88939313 -6333338 - B1F SINE Alu -9 140 2 1 1263 759 96 96 0 chr17 88939404 88939529 -6333122 + URR1B DNA MER1_type 46 182 -43 1 1263 230 326 51 31 chr17 88939677 88939775 -6332876 - MIRc SINE MIR -65 203 104 1 1263 215 200 75 0 chr17 88940033 88940073 -6332578 - PB1D7 SINE Alu -10 110 68 1 1263 403 264 0 62 chr17 88940485 88940582 -6332069 + RSINE1 SINE B4 1 91 -74 1 1263 354 91 0 0 chr17 88940599 88940654 -6331997 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1263 261 224 0 0 chr17 88940831 88940880 -6331771 + MIRm SINE MIR 119 167 -109 1 1263 384 22 0 0 chr17 88940928 88940973 -6331678 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1263 280 397 40 60 chr17 88941007 88941157 -6331494 - B4 SINE B4 -125 167 21 1 1263 261 0 0 0 chr17 88941157 88941186 -6331465 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1263 723 195 96 35 chr17 88941450 88941647 -6331004 - B3 SINE B2 -7 209 1 1 1263 351 0 0 0 chr17 88941976 88942015 -6330636 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1263 278 0 54 0 chr17 88942092 88942129 -6330522 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1263 861 181 0 0 chr17 88943825 88943963 -6328688 - B1_Mus1 SINE Alu -9 139 2 1 1263 308 306 160 11 chr17 88945457 88945645 -6327006 + MIR SINE MIR 20 235 -27 1 1263 636 264 0 0 chr17 88945839 88945987 -6326664 - B1F SINE Alu -1 148 1 1 1263 258 32 0 0 chr17 88946510 88946541 -6326110 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 1 1263 558 272 34 0 chr17 88947034 88947181 -6325470 + RSINE1 SINE B4 8 159 -6 1 1263 551 273 51 41 chr17 88947217 88947412 -6325239 + B3 SINE B2 12 208 -8 1 1263 2868 24 3 0 chr17 88947575 88947912 -6324739 - ORR1A1 LTR MaLR -8 338 1 1 1263 480 336 7 0 chr17 88948095 88948232 -6324419 - ID_B1 SINE B4 -7 217 80 1 1263 404 227 193 35 chr17 88948243 88948357 -6324294 + RSINE1 SINE B4 3 134 -31 1 1263 581 203 67 8 chr17 88950689 88950823 -6321828 + RSINE1 SINE B4 2 143 -22 1 1263 246 273 120 104 chr17 88950823 88950881 -6321770 + B2_Mm2 SINE B2 1 195 0 1 1263 466 281 170 0 chr17 88951070 88951223 -6321428 + B3 SINE B2 1 179 -37 1 1263 207 0 0 0 chr17 88951683 88951706 -6320945 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1263 334 320 0 30 chr17 88952988 88953088 -6319563 + PB1D10 SINE Alu 12 108 -9 1 1263 219 69 0 0 chr17 88953088 88953117 -6319534 + (GGAGA)n Simple_repeat Simple_repeat 1 29 0 1 1263 454 212 0 0 chr17 88953250 88953335 -6319316 + B3A SINE B2 1 85 -113 1 1263 226 342 42 72 chr17 88953335 88953417 -6319234 + RSINE1 SINE B4 2 163 -2 1 1263 480 35 0 0 chr17 88954022 88954080 -6318571 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1263 28 0 0 0 chr17 88954398 88954426 -6318225 + AT_rich Low_complexity Low_complexity 1 28 0 1 1263 327 262 98 80 chr17 88954444 88954556 -6318095 - RSINE1 SINE B4 -29 136 23 1 1263 467 220 51 0 chr17 88954572 88954683 -6317968 - B1F2 SINE Alu -1 148 10 1 1263 558 302 198 29 chr17 88956072 88956499 -6316152 - MLT1F LTR MaLR -40 529 19 1 1263 387 0 0 0 chr17 88956605 88956648 -6316003 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1263 338 251 99 33 chr17 88956742 88956884 -6315767 + MIR SINE MIR 20 174 -94 1 1263 233 283 0 36 chr17 88957462 88957517 -6315134 - tRNA-Ala-GCY_ tRNA tRNA -14 61 9 1 1263 22 35 0 0 chr17 88958538 88958567 -6314084 + AT_rich Low_complexity Low_complexity 1 29 0 1 1263 385 314 2 0 chr17 88958636 88958740 -6313911 - B1_Mur2 SINE Alu -43 106 2 1 1263 875 173 31 56 chr17 88959024 88959185 -6313466 + B2_Mm2 SINE B2 1 157 -38 1 1263 198 0 0 0 chr17 88959185 88959207 -6313444 + (TA)n Simple_repeat Simple_repeat 1 22 0 1 1263 875 173 31 56 chr17 88959207 88959241 -6313410 + B2_Mm2 SINE B2 158 191 -4 1 1263 227 103 26 0 chr17 88959491 88959530 -6313121 + (TCTA)n Simple_repeat Simple_repeat 1 40 0 1 1263 210 231 118 108 chr17 88959624 88959726 -6312925 - PB1D10 SINE Alu -1 116 14 1 1263 3342 40 2 8 chr17 88959881 88960279 -6312372 + MTA_Mm LTR MaLR 1 396 0 1 1263 324 333 155 0 chr17 88960764 88960893 -6311758 + RSINE1 SINE B4 13 161 -4 1 1263 712 245 25 20 chr17 88960939 88961143 -6311508 + B3 SINE B2 4 208 -8 1 1263 546 57 0 0 chr17 88961170 88961240 -6311411 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 1 1263 719 114 88 0 chr17 88961281 88961395 -6311256 + B1_Mus2 SINE Alu 1 124 -23 1 1263 265 266 48 87 chr17 88962041 88962144 -6310507 + PB1D7 SINE Alu 1 99 -21 1 1263 395 149 39 10 chr17 88962144 88962246 -6310405 + GA-rich Low_complexity Low_complexity 4 108 0 1 1263 1126 62 21 0 chr17 88962286 88962430 -6310221 + B1_Mus2 SINE Alu 1 147 0 1 1263 1997 274 106 46 chr17 88962736 88964011 -6308640 - L1MB8 LINE L1 -296 5882 4516 1 1263 237 175 176 102 chr17 88964054 88964162 -6308489 - L1M4b LINE L1 -6112 1222 1107 1 1263 267 284 85 54 chr17 88964556 88964686 -6307965 - L1M4b LINE L1 -6811 523 390 1 1263 309 327 211 6 chr17 88964722 88964888 -6307763 - L1M4b LINE L1 -7004 330 131 1 1263 229 240 0 146 chr17 88965475 88965680 -6306971 + (CACAG)n Simple_repeat Simple_repeat 4 178 0 1 1263 389 272 70 97 chr17 88965842 88966070 -6306581 - ID_B1 SINE B4 -1 223 2 1 1263 499 191 33 0 chr17 88966141 88966249 -6306402 + B1F2 SINE Alu 4 114 -6 1 1263 629 215 15 8 chr17 88966345 88966476 -6306175 + B1_Mus2 SINE Alu 5 136 -11 1 1263 228 307 115 29 chr17 88967291 88967395 -6305256 - PB1D10 SINE Alu -1 116 4 1 1263 446 310 28 7 chr17 88967602 88967745 -6304906 + RSINE1 SINE B4 1 146 -19 1 1263 219 69 0 0 chr17 88967920 88967949 -6304702 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1263 720 254 17 28 chr17 88968042 88968220 -6304431 + B3A SINE B2 1 176 -22 1 1263 333 0 0 0 chr17 88968649 88968686 -6303965 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1263 395 223 116 0 chr17 88969231 88969343 -6303308 - RSINE1 SINE B4 -40 125 1 1 1263 298 215 108 0 chr17 88969395 88969460 -6303191 - ORR1E LTR MaLR -3 376 305 1 1263 1246 189 84 79 chr17 88969471 88969678 -6302973 - Lx9 LINE L1 -1 7643 7453 1 1263 1756 199 62 0 chr17 88969678 88970035 -6302616 - RLTR30 LTR ERV1 0 379 1 1 1263 1246 189 84 79 chr17 88970035 88970206 -6302445 - Lx9 LINE L1 -192 7452 7263 1 1263 389 262 80 48 chr17 88970206 88970447 -6302204 - ORR1E LTR MaLR -65 314 37 1 1263 843 86 0 0 chr17 88970620 88970737 -6301914 + (TTTC)n Simple_repeat Simple_repeat 4 120 0 1 1263 204 179 0 0 chr17 88970735 88970774 -6301877 + CT-rich Low_complexity Low_complexity 3 41 0 1 1263 1337 109 10 10 chr17 88970774 88970968 -6301683 - B2_Mm2 SINE B2 0 195 2 1 1263 555 156 108 2 chr17 88971331 88971447 -6301204 + B1_Mur1 SINE Alu 7 144 -6 1 1263 1553 204 58 63 chr17 88971545 88971907 -6300744 - ORR1D1 LTR MaLR -14 360 1 1 1263 243 297 53 26 chr17 88972778 88972892 -6299759 + L1MC LINE L1 5686 5802 -2080 1 1263 1074 52 7 7 chr17 88973660 88973796 -6298855 + B1_Mus1 SINE Alu 1 136 -12 1 1263 379 310 54 0 chr17 88973929 88974058 -6298593 - RSINE1 SINE B4 -13 152 17 1 1263 207 0 0 0 chr17 88974869 88974892 -6297759 + (GGGA)n Simple_repeat Simple_repeat 1 23 0 1 1263 273 211 19 0 chr17 88975085 88975137 -6297514 + B3 SINE B2 2 54 -162 1 1263 334 189 322 0 chr17 88975218 88975308 -6297343 + B3 SINE B2 32 150 -66 1 1263 582 130 11 0 chr17 88975298 88975390 -6297261 - B3A SINE B2 -105 93 1 1 1263 295 297 161 43 chr17 88976054 88976265 -6296386 - B4 SINE B4 -2 290 55 1 1263 256 265 146 103 chr17 88976749 88977002 -6295649 - MLT1A0 LTR MaLR -3 405 99 1 1263 1339 114 76 0 chr17 88977065 88977275 -6295376 - ORR1A3 LTR MaLR -93 233 8 1 1263 266 296 12 50 chr17 88977514 88977632 -6295019 - ID4 SINE ID -37 115 10 1 1263 679 261 84 11 chr17 88978848 88979167 -6293484 + L1MA4A LINE L1 5688 6026 -274 1 1263 324 83 0 0 chr17 88980392 88980440 -6292211 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1263 212 171 0 0 chr17 88982195 88982236 -6290415 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 1 1263 219 69 0 0 chr17 88982373 88982402 -6290249 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 1 1263 844 216 114 11 chr17 88982702 88982964 -6289687 - B4 SINE B4 -2 290 2 1 1263 729 167 72 0 chr17 88983805 88983943 -6288708 - B1_Mur3 SINE Alu -1 148 1 1 1263 787 245 48 35 chr17 88984236 88984428 -6288223 - Lx7 LINE L1 -1870 5826 5629 1 1263 2441 78 18 33 chr17 88984428 88984485 -6288166 - ORR1A2 LTR MaLR 0 327 273 1 1263 1479 78 16 0 chr17 88984485 88984677 -6287974 - B2_Mm2 SINE B2 0 195 1 1 1263 2441 78 18 33 chr17 88984677 88984951 -6287700 - ORR1A2 LTR MaLR -55 272 1 1 1263 787 245 48 35 chr17 88984951 88984986 -6287665 - Lx7 LINE L1 -2068 5628 5596 1 1263 2707 134 19 2 chr17 88985868 88986280 -6286371 - MTC LTR MaLR -2 419 1 1 1263 400 271 37 0 chr17 88986566 88986673 -6285978 + URR1B DNA MER1_type 2 112 -113 1 1263 1697 26 0 0 chr17 88987980 88988173 -6284478 + B2_Mm1t SINE B2 1 193 0 1 1263 23 54 0 0 chr17 88988436 88988473 -6284178 + AT_rich Low_complexity Low_complexity 1 37 0 1 1263 284 270 209 7 chr17 88988473 88988626 -6284025 - B3A SINE B2 -14 184 1 1 1263 844 221 23 59 chr17 88988666 88988887 -6283764 - B3 SINE B2 -3 213 1 1 1263 2284 61 37 0 chr17 88989010 88989307 -6283344 - ORR1A2 LTR MaLR -8 319 12 1 1263 503 237 35 0 chr17 88989823 88989937 -6282714 + PB1 SINE Alu 1 118 -9 1 1263 1062 102 17 0 chr17 88990178 88990354 -6282297 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 1263 1057 137 6 8 chr17 88990380 88990741 -6281910 + (CA)n Simple_repeat Simple_repeat 1 359 0 1 1263 757 237 40 6 chr17 88990961 88991135 -6281516 + B3A SINE B2 1 180 -18 1 1263 8242 50 3 9 chr17 88991817 88992951 -6279700 + L1_Mus1 LINE L1 5438 6567 0 1 1263 559 250 133 40 chr17 88993002 88993227 -6279424 + ORR1E LTR MaLR 114 359 0 1 1263 687 267 26 0 chr17 88993412 88993603 -6279048 - B3 SINE B2 -19 197 2 1 1263 204 184 0 0 chr17 88994209 88994258 -6278393 + CT-rich Low_complexity Low_complexity 2 50 0 1 1263 235 295 98 0 chr17 88994264 88994325 -6278326 - PB1D10 SINE Alu -42 75 9 1 1263 596 241 90 62 chr17 88995893 88996070 -6276581 + B3A SINE B2 2 183 -15 1 1263 303 140 0 0 chr17 88996413 88996463 -6276188 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1263 223 148 18 36 chr17 88996974 88997030 -6275621 + C-rich Low_complexity Low_complexity 4 58 0 1 1263 252 77 0 0 chr17 88997813 88997852 -6274799 + (T)n Simple_repeat Simple_repeat 1 39 0 1 157 424 290 7 44 chr17 88997865 88998002 -6274649 + RSINE1 SINE B4 2 133 -32 1 1264 486 0 0 0 chr17 88998127 88998181 -6274470 + (TTTAG)n Simple_repeat Simple_repeat 3 56 0 1 1264 254 304 316 13 chr17 88999161 88999471 -6273180 + Lx8 LINE L1 6903 7306 -167 1 1264 748 45 60 0 chr17 88999492 88999626 -6273025 + (CA)n Simple_repeat Simple_repeat 2 143 0 1 1264 306 0 0 0 chr17 88999739 88999773 -6272878 + (CAA)n Simple_repeat Simple_repeat 3 36 0 1 1264 321 321 132 16 chr17 89000660 89000850 -6271801 - MIR SINE MIR -45 217 6 1 1264 570 159 0 0 chr17 89001599 89001687 -6270964 + PB1D9 SINE Alu 2 89 -31 2 1264 844 238 11 26 chr17 89001673 89001863 -6270788 + B3A SINE B2 12 198 0 3 1264 612 81 0 0 chr17 89001871 89001958 -6270693 + (GAA)n Simple_repeat Simple_repeat 2 88 0 4 1264 969 120 49 0 chr17 89002152 89002294 -6270357 - B1_Mur4 SINE Alu -1 149 1 5 1264 449 254 78 28 chr17 89002688 89002830 -6269821 - B1F SINE Alu 0 149 1 6 1264 387 0 0 0 chr17 89002921 89002964 -6269687 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 1264 281 333 65 22 chr17 89002988 89003126 -6269525 - RSINE1 SINE B4 -19 146 3 8 1264 883 192 61 99 chr17 89003168 89003624 -6269027 - RLTR20A2 LTR ERVK 0 578 1 9 1264 779 167 41 7 chr17 89003999 89004144 -6268507 - B1_Mur4 SINE Alu 0 150 1 1 1264 333 252 102 114 chr17 89004144 89004156 -6268495 - B4 SINE B4 -59 173 70 1 1264 357 310 105 48 chr17 89004248 89004506 -6268145 - L1M5 LINE L1 -2132 4014 3730 1 1264 608 215 42 56 chr17 89004538 89004681 -6267970 + B1_Mus2 SINE Alu 2 142 -5 1 1264 209 128 26 0 chr17 89004743 89004782 -6267869 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 1264 739 146 84 42 chr17 89004845 89004988 -6267663 + B1_Mur4 SINE Alu 2 150 0 1 1264 533 182 7 0 chr17 89005071 89005214 -6267437 + CT-rich Low_complexity Low_complexity 1 144 0 1 1264 473 358 0 0 chr17 89005220 89005354 -6267297 - ID_B1 SINE B4 -5 219 86 1 1264 328 278 98 85 chr17 89005372 89005486 -6267165 - L1MC LINE L1 -2638 3508 3400 1 1264 408 251 231 12 chr17 89005486 89005659 -6266992 - B3 SINE B2 -3 213 3 1 1264 328 278 98 85 chr17 89005659 89005780 -6266871 - L1MC LINE L1 -2747 3399 3271 1 1264 542 15 0 15 chr17 89005826 89005894 -6266757 + (TCTA)n Simple_repeat Simple_repeat 3 69 0 2 1264 422 226 23 23 chr17 89005928 89006014 -6266637 - PB1D7 SINE Alu -28 92 7 2 1264 1117 289 68 22 chr17 89006420 89006504 -6266147 - L1_Rod LINE L1 -9 5838 5749 2 1264 766 38 19 9 chr17 89006504 89006610 -6266041 + (TTTC)n Simple_repeat Simple_repeat 2 108 0 2 1264 1117 289 68 22 chr17 89006610 89007014 -6265637 - L1_Rod LINE L1 -99 5748 5328 2 1264 306 0 0 0 chr17 89007053 89007087 -6265564 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 1264 391 256 14 142 chr17 89007951 89008233 -6264418 - L1M2 LINE L1 -764 5379 5134 2 1264 216 0 0 0 chr17 89008250 89008274 -6264377 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1264 578 284 58 34 chr17 89008377 89008585 -6264066 - B3 SINE B2 -2 214 2 2 1264 357 290 63 28 chr17 89008665 89008807 -6263844 + MIRb SINE MIR 23 169 -99 2 1264 231 114 0 0 chr17 89009300 89009335 -6263316 + (GGA)n Simple_repeat Simple_repeat 2 36 0 2 1264 447 294 7 67 chr17 89009461 89009596 -6263055 + RSINE1 SINE B4 35 161 -4 3 1264 312 221 177 10 chr17 89009976 89010072 -6262579 - PB1D10 SINE Alu -5 112 1 3 1264 404 229 61 0 chr17 89010275 89010406 -6262245 - Lx6 LINE L1 -1 7459 7321 3 1264 332 222 205 79 chr17 89010872 89011035 -6261616 - RLTR22_Mus LTR ERVK -398 1450 1284 3 1264 405 0 0 0 chr17 89011035 89011080 -6261571 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1264 332 215 295 28 chr17 89011080 89011135 -6261516 - RLTR22_Mus LTR ERVK -554 1294 1207 3 1264 403 121 0 0 chr17 89011136 89011194 -6261457 + L1VL2 LINE L1 220 277 -6058 3 1264 267 31 0 0 chr17 89011347 89011379 -6261272 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1264 430 321 102 6 chr17 89012288 89012445 -6260206 + B4A SINE B4 66 237 -55 3 1264 313 216 32 102 chr17 89012464 89012650 -6260001 - ORR1D2 LTR MaLR -29 341 169 3 1264 731 218 211 9 chr17 89012664 89012877 -6259774 - ORR1D2 LTR MaLR -112 258 3 3 1264 280 308 15 0 chr17 89012878 89012943 -6259708 + B4 SINE B4 223 288 -4 3 1264 495 0 0 0 chr17 89012971 89013026 -6259625 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 1264 695 95 9 0 chr17 89013390 89013495 -6259156 + (TTCC)n Simple_repeat Simple_repeat 3 108 0 4 1264 243 0 0 0 chr17 89013869 89013896 -6258755 + (CAG)n Simple_repeat Simple_repeat 3 29 0 4 1264 378 0 0 0 chr17 89014054 89014096 -6258555 + (TC)n Simple_repeat Simple_repeat 2 43 0 4 1264 357 24 0 0 chr17 89014096 89014137 -6258514 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1264 384 241 188 84 chr17 89014195 89014408 -6258243 - B4A SINE B4 -56 236 2 4 1264 315 0 0 0 chr17 89014470 89014505 -6258146 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1264 288 0 0 0 chr17 89015778 89015810 -6256841 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1264 261 57 0 0 chr17 89016412 89016447 -6256204 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 4 1264 751 315 113 43 chr17 89016482 89016764 -6255887 - MLT1A0 LTR MaLR -57 308 7 4 1264 2818 36 0 206 chr17 89016789 89017275 -6255376 - RLTR10 LTR ERVK -4 386 1 5 1264 9045 21 0 1 chr17 89017275 89018274 -6254377 - RLTR10-int LTR ERVK 0 1987 990 5 1264 322 264 62 39 chr17 89018356 89018486 -6254165 - RLTR10-int LTR ERVK -5987 1594 1462 5 1264 6193 54 72 113 chr17 89018550 89019549 -6253102 - RLTR10-int LTR ERVK -989 998 41 5 1264 2839 34 0 206 chr17 89019565 89020051 -6252600 - RLTR10 LTR ERVK -4 386 1 5 1264 378 0 0 0 chr17 89020248 89020290 -6252361 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1264 237 296 0 40 chr17 89022039 89022113 -6250538 - MLT1A0 LTR MaLR -67 323 253 5 1264 909 223 102 5 chr17 89022155 89022371 -6250280 - MTEa LTR MaLR 0 379 143 5 1264 4101 162 42 103 chr17 89022426 89023470 -6249181 - RMER12 LTR ERVK -103 1219 36 5 1264 545 282 7 30 chr17 89023521 89023656 -6248995 - MTEa LTR MaLR -247 132 1 5 1264 608 215 55 7 chr17 89023688 89023833 -6248818 - MLT1A0 LTR MaLR -204 161 10 5 1264 220 250 19 0 chr17 89024409 89024461 -6248190 - MIRb SINE MIR -94 174 122 5 1264 528 259 128 33 chr17 89025010 89025253 -6247398 - MER67A LTR ERV1 -277 266 1 5 1264 427 223 21 11 chr17 89026704 89026799 -6245852 + MIRb SINE MIR 28 123 -145 5 1264 288 0 0 0 chr17 89026928 89026960 -6245691 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 1264 266 288 134 9 chr17 89027331 89027443 -6245208 - B4 SINE B4 -17 275 150 6 1264 486 61 0 0 chr17 89027466 89027532 -6245119 + (CA)n Simple_repeat Simple_repeat 2 67 0 6 1264 755 78 70 23 chr17 89027538 89027709 -6244942 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 6 1264 476 215 21 0 chr17 89027726 89027819 -6244832 - B4A SINE B4 -192 100 6 6 1264 208 324 0 9 chr17 89028620 89028726 -6243925 + G-rich Low_complexity Low_complexity 3 107 0 6 1264 470 321 26 10 chr17 89030219 89030414 -6242237 + L1MB7 LINE L1 5927 6124 -60 6 1264 777 133 25 0 chr17 89030804 89030924 -6241727 + B1_Mus2 SINE Alu 25 147 0 6 1264 295 307 20 0 chr17 89031264 89031365 -6241286 - L1MB2 LINE L1 -128 6043 5941 6 1264 379 339 104 39 chr17 89031378 89031685 -6240966 - L1MD LINE L1 -2911 3235 2909 6 1264 863 114 64 7 chr17 89031699 89031840 -6240811 - B1_Mur3 SINE Alu 0 149 1 6 1264 721 316 62 23 chr17 89031973 89032443 -6240208 - L1M3 LINE L1 -3302 2838 2351 7 1264 380 252 20 109 chr17 89032525 89032672 -6239979 - B3 SINE B2 -35 181 48 7 1264 436 175 25 0 chr17 89032704 89032784 -6239867 - B1F SINE Alu 0 149 68 7 1264 876 161 191 16 chr17 89033813 89033996 -6238655 + B3 SINE B2 2 216 0 7 1264 324 282 0 34 chr17 89034154 89034242 -6238409 - PB1D10 SINE Alu -32 85 1 7 1264 470 61 15 0 chr17 89036634 89036700 -6235951 + (TTCC)n Simple_repeat Simple_repeat 3 69 0 7 1264 652 286 79 24 chr17 89036749 89037128 -6235523 + L1_Mur3 LINE L1 4264 4663 -1217 7 1264 8197 60 11 5 chr17 89037961 89039293 -6233358 - L1VL2 LINE L1 -1575 2040 698 7 1264 1176 83 5 115 chr17 89039290 89039507 -6233144 - L1VL2 LINE L1 -5933 402 210 7 1264 484 15 15 15 chr17 89039583 89039649 -6233002 + (GGAA)n Simple_repeat Simple_repeat 4 69 0 7 1264 212 219 12 24 chr17 89041071 89041155 -6231496 + A-rich Low_complexity Low_complexity 2 84 0 7 1264 1361 77 5 21 chr17 89041603 89041790 -6230861 - B2_Mm1a SINE B2 -9 184 1 8 1264 412 303 83 0 chr17 89041924 89042033 -6230618 - ID_B1 SINE B4 -8 216 99 8 1264 219 361 37 0 chr17 89041938 89042046 -6230605 - B1_Mur4 SINE Alu -34 116 5 8 1264 324 0 0 0 chr17 89042054 89042090 -6230561 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 1264 261 287 47 69 chr17 89042693 89042925 -6229726 - RLTR21 LTR ERVK -257 1315 1089 8 1264 376 264 36 0 chr17 89042946 89043113 -6229538 + (CATA)n Simple_repeat Simple_repeat 2 174 0 8 1264 321 266 39 96 chr17 89043142 89043371 -6229280 - RLTR21 LTR ERVK -268 1304 1089 8 1264 226 284 40 0 chr17 89043372 89043520 -6229131 + (CATA)n Simple_repeat Simple_repeat 1 154 0 8 1264 258 56 0 0 chr17 89043972 89044008 -6228643 + (TCTG)n Simple_repeat Simple_repeat 2 37 0 8 1264 682 191 1 8 chr17 89044949 89045081 -6227570 + ORR1C2 LTR MaLR 65 190 -169 8 1264 229 109 43 0 chr17 89045081 89045127 -6227524 + C-rich Low_complexity Low_complexity 6 53 0 9 1264 283 224 0 0 chr17 89045137 89045204 -6227447 + ORR1C2 LTR MaLR 352 418 -1 8 1264 1040 51 0 7 chr17 89046781 89046919 -6225732 + B1_Mus1 SINE Alu 12 148 0 9 1264 774 241 32 16 chr17 89047437 89047627 -6225024 - B3A SINE B2 0 198 6 9 1264 4355 202 45 8 chr17 89047675 89048039 -6224612 + Lx9 LINE L1 6582 6942 -702 9 1264 1669 153 63 150 chr17 89048039 89048453 -6224198 - ORR1C1 LTR MaLR 0 378 1 9 1264 4355 193 50 6 chr17 89048453 89049063 -6223588 + Lx9 LINE L1 6943 7609 -35 9 1264 535 240 23 167 chr17 89049063 89049306 -6223345 - LTR37A LTR ERV1 0 468 198 9 1264 1057 163 113 0 chr17 89049306 89049509 -6223142 + URR1A DNA MER1_type 1 226 0 9 1264 535 265 59 148 chr17 89049509 89049656 -6222995 - LTR37A LTR ERV1 -229 197 84 9 1264 1764 241 27 17 chr17 89049682 89050096 -6222555 + MTD LTR MaLR 1 418 -1 9 1264 394 205 26 0 chr17 89050212 89050363 -6222288 + (TCTCTG)n Simple_repeat Simple_repeat 6 160 0 9 1264 332 308 0 0 chr17 89050366 89050444 -6222207 - RSINE1 SINE B4 -85 80 3 9 1264 690 310 67 73 chr17 89052762 89053103 -6219548 - MLT1A0 LTR MaLR -4 361 23 1 1264 270 0 0 0 chr17 89053407 89053437 -6219214 + (CGGGG)n Simple_repeat Simple_repeat 5 34 0 1 1264 402 227 51 10 chr17 89053550 89053648 -6219003 - URR1B DNA MER1_type -122 103 2 1 1264 295 293 18 125 chr17 89053651 89053819 -6218832 - B4 SINE B4 -141 151 2 1 1264 1432 94 0 5 chr17 89054217 89054410 -6218241 - B2_Mm2 SINE B2 0 195 4 1 1264 1191 48 7 14 chr17 89054587 89054735 -6217916 - B1_Mus1 SINE Alu 0 148 2 1 1264 1201 265 226 15 chr17 89054778 89055373 -6217278 - Lx8 LINE L1 -326 7147 6427 1 1264 1460 231 95 3 chr17 89055373 89055444 -6217207 + MTD LTR MaLR 41 111 -308 1 1264 194 0 0 37 chr17 89055444 89055471 -6217180 + (TTA)n Simple_repeat Simple_repeat 1 26 0 1 1264 1460 231 95 3 chr17 89055471 89055746 -6216905 + MTD LTR MaLR 112 418 -1 1 1264 21 0 0 0 chr17 89056019 89056040 -6216611 + AT_rich Low_complexity Low_complexity 1 21 0 1 1264 412 254 109 0 chr17 89056040 89056150 -6216501 + B4A SINE B4 1 122 -170 1 1264 235 309 46 98 chr17 89056150 89056234 -6216417 + B3A SINE B2 1 184 -14 1 1264 893 334 114 26 chr17 89056389 89057031 -6215620 - MER97c DNA MER1_type? -379 711 14 1 1264 408 299 79 17 chr17 89057050 89057227 -6215424 + MER97c DNA MER1_type? 453 640 -450 1 1264 561 101 0 0 chr17 89057304 89057403 -6215248 + (GA)n Simple_repeat Simple_repeat 2 100 0 1 1264 1900 211 0 0 chr17 89058917 89059287 -6213364 + RLTR14 LTR ERV1 12 381 -1 1 1264 1254 41 0 0 chr17 89060159 89060306 -6212345 - B1_Mus1 SINE Alu -1 147 1 1 1264 629 162 28 42 chr17 89060310 89060452 -6212199 - B1_Mur2 SINE Alu 0 149 10 1 1264 284 303 80 36 chr17 89060497 89060634 -6212017 - B1F1 SINE Alu -1 148 6 1 1264 353 299 117 24 chr17 89060719 89060925 -6211726 - L1MDa LINE L1 -6374 259 35 1 1264 721 249 9 95 chr17 89063121 89063352 -6209299 + B3 SINE B2 1 211 -5 1 1264 412 227 0 96 chr17 89063469 89063625 -6209026 + MT2B LTR ERVL 124 264 -337 1 1264 986 53 0 0 chr17 89063517 89063650 -6209001 + B1_Mm SINE Alu 5 137 -10 1 1264 393 22 0 0 chr17 89063650 89063696 -6208955 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 1 1264 530 146 10 0 chr17 89064315 89064411 -6208240 + G-rich Low_complexity Low_complexity 5 101 0 1 1264 256 355 7 101 chr17 89064738 89064767 -6207884 + MTEa LTR MaLR 21 47 -332 1 1264 818 225 165 110 chr17 89064767 89065186 -6207465 + RMER10A LTR ERVL 1 442 0 1 1264 256 355 7 101 chr17 89065186 89065294 -6207357 + MTEa LTR MaLR 48 145 -234 1 1264 832 77 8 8 chr17 89067004 89067135 -6205516 + (GA)n Simple_repeat Simple_repeat 2 132 0 1 1264 188 300 74 53 chr17 89067327 89067422 -6205229 - MER5A DNA MER1_type 0 189 93 1 1264 449 76 15 0 chr17 89068302 89068368 -6204283 + (TC)n Simple_repeat Simple_repeat 2 68 0 1 1264 214 254 0 16 chr17 89068398 89068462 -6204189 - PB1D10 SINE Alu 0 117 55 1 1264 1016 30 0 15 chr17 89068524 89068659 -6203992 - B1_Mus1 SINE Alu -9 139 7 1 1264 1212 57 0 0 chr17 89069723 89069880 -6202771 + (CA)n Simple_repeat Simple_repeat 1 157 0 1 1264 203 79 26 0 chr17 89071103 89071141 -6201510 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1264 1100 84 0 7 chr17 89071144 89071288 -6201363 + B1_Mm SINE Alu 1 143 -4 1 1264 314 74 0 18 chr17 89071318 89071373 -6201278 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 1 1264 212 182 38 25 chr17 89071589 89071668 -6200983 + C-rich Low_complexity Low_complexity 4 83 0 1 1264 246 62 0 0 chr17 89071918 89071950 -6200701 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 1264 185 94 31 0 chr17 89072590 89072622 -6200029 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1 1264 999 168 5 26 chr17 89073349 89073539 -6199112 - B3 SINE B2 -23 193 8 1 1264 654 307 61 32 chr17 89073746 89074025 -6198626 + B4A SINE B4 2 288 -4 1 1264 350 272 28 40 chr17 89074029 89074281 -6198370 + (CATA)n Simple_repeat Simple_repeat 1 249 0 1 1264 420 77 0 0 chr17 89074314 89074379 -6198272 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 1264 432 198 39 10 chr17 89074556 89074658 -6197993 - B1F SINE Alu -44 105 1 1 1264 304 294 0 168 chr17 89075482 89075678 -6196973 - RSINE1 SINE B4 -1 164 2 1 1264 21 0 0 0 chr17 89075800 89075821 -6196830 + AT_rich Low_complexity Low_complexity 1 21 0 1 1264 4794 22 0 0 chr17 89075821 89076361 -6196290 - L1Md_A LINE L1 0 6582 6043 1 1264 37 52 0 0 chr17 89076761 89076819 -6195832 + AT_rich Low_complexity Low_complexity 1 58 0 1 1264 26047 148 52 13 chr17 89076819 89082662 -6189989 - Lx4B LINE L1 -3 6973 869 1 1264 322 258 45 0 chr17 89082969 89083058 -6189593 - L1M3 LINE L1 -1226 4914 4822 1 1264 279 161 0 0 chr17 89083074 89083130 -6189521 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1264 335 335 47 64 chr17 89083249 89083421 -6189230 - B4A SINE B4 -121 171 3 1 1264 410 314 37 33 chr17 89083431 89083645 -6189006 - L1M3 LINE L1 -1449 4691 4477 1 1264 1071 168 5 0 chr17 89083645 89083835 -6188816 + URR1A DNA MER1_type 1 191 -35 1 1264 202 321 0 0 chr17 89083867 89083920 -6188731 + CT-rich Low_complexity Low_complexity 4 56 0 1 1264 974 220 88 102 chr17 89083939 89084313 -6188338 - ORR1D1 LTR MaLR -1 373 5 1 1264 596 279 83 56 chr17 89084401 89084446 -6188205 - L1M3 LINE L1 -1694 4446 4405 1 1264 755 243 27 54 chr17 89084446 89084668 -6187983 - B3 SINE B2 0 216 1 1 1264 596 279 83 56 chr17 89084668 89084771 -6187880 - L1M3 LINE L1 -1736 4404 4293 1 1264 796 171 14 14 chr17 89084771 89084919 -6187732 - B1_Mur4 SINE Alu 0 150 3 1 1264 596 279 83 56 chr17 89084919 89085201 -6187450 - L1M3 LINE L1 -1848 4292 4004 1 1264 327 235 9 101 chr17 89085221 89085330 -6187321 - B3A SINE B2 -1 197 99 1 1264 284 346 90 50 chr17 89085449 89085470 -6187181 - B4 SINE B4 -4 288 270 1 1264 297 0 0 0 chr17 89085470 89085503 -6187148 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1264 284 346 90 50 chr17 89085503 89085622 -6187029 - B4 SINE B4 -23 269 137 1 1264 214 50 0 48 chr17 89085622 89085664 -6186987 + (TTA)n Simple_repeat Simple_repeat 3 42 0 1 1264 284 346 90 50 chr17 89085664 89085799 -6186852 - B4 SINE B4 -156 136 2 1 1264 1027 162 60 26 chr17 89085854 89086072 -6186579 - RLTR11A LTR ERVK 0 528 308 1 1264 235 0 28 28 chr17 89086072 89086108 -6186543 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 1264 812 207 53 52 chr17 89086108 89086367 -6186284 - RLTR11A LTR ERVK -270 307 93 1 1264 834 155 238 10 chr17 89086350 89086644 -6186007 + MTC LTR MaLR 53 413 -8 1 1264 376 155 83 0 chr17 89088373 89088457 -6184194 - Lx8 LINE L1 -1644 5829 5739 1 1264 454 300 45 34 chr17 89088498 89088674 -6183977 - B3A SINE B2 -18 180 3 1 1264 243 0 0 0 chr17 89088707 89088734 -6183917 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1264 1242 28 7 0 chr17 89088742 89088887 -6183764 - B1_Mm SINE Alu 0 147 2 1 1264 41 21 0 0 chr17 89089214 89089262 -6183389 + AT_rich Low_complexity Low_complexity 1 48 0 1 1264 383 315 84 25 chr17 89090338 89090624 -6182027 - L1MC LINE L1 -2093 5789 5487 1 1264 332 310 59 152 chr17 89090646 89090969 -6181682 - RMER5 LTR ERV1 -18 516 224 1 1264 21 0 0 0 chr17 89091203 89091224 -6181427 + AT_rich Low_complexity Low_complexity 1 21 0 1 1264 315 0 0 0 chr17 89091240 89091275 -6181376 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 1264 1203 54 0 20 chr17 89091367 89091518 -6181133 - B1_Mus1 SINE Alu 0 148 1 1 1264 984 208 66 0 chr17 89091715 89091912 -6180739 + B3 SINE B2 1 210 -6 1 1264 362 312 0 0 chr17 89091966 89092059 -6180592 - RSINE1 SINE B4 -7 158 66 1 1264 590 59 35 0 chr17 89092938 89093023 -6179628 + (TTTTC)n Simple_repeat Simple_repeat 2 89 0 1 1264 326 217 257 14 chr17 89093050 89093190 -6179461 + B4A SINE B4 2 175 -117 1 1264 331 188 34 8 chr17 89093275 89093393 -6179258 + (CA)n Simple_repeat Simple_repeat 1 121 0 1 1264 22 35 0 0 chr17 89094224 89094253 -6178398 + AT_rich Low_complexity Low_complexity 1 29 0 1 1264 353 374 0 0 chr17 89094444 89094559 -6178092 + polypyrimidine Low_complexity Low_complexity 3 117 0 1 1264 439 350 143 24 chr17 89096243 89096864 -6175787 + Charlie24 DNA MER1_type 779 1473 -977 1 1264 393 90 33 33 chr17 89097160 89097252 -6175399 + GA-rich Low_complexity Low_complexity 3 94 0 1 1264 333 0 0 0 chr17 89097252 89097289 -6175362 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1264 217 286 185 26 chr17 89097306 89097457 -6175194 - B4A SINE B4 -18 274 100 1 1264 356 279 67 83 chr17 89097692 89097872 -6174779 - L1ME1 LINE L1 -2 6177 6001 1 1264 2130 98 65 0 chr17 89097944 89098251 -6174400 - ORR1A2 LTR MaLR 0 327 1 1 1264 292 269 70 112 chr17 89098507 89098792 -6173859 - L1MC LINE L1 -1319 4827 4555 1 1264 242 270 71 9 chr17 89098800 89098912 -6173739 - L1M4c LINE L1 -2683 3696 3578 1 1264 547 255 102 12 chr17 89098917 89099084 -6173567 - B3A SINE B2 -16 182 1 1 1264 755 271 90 13 chr17 89099101 89099459 -6173192 - L1M4c LINE L1 -2774 3602 3223 1 1264 388 179 45 45 chr17 89099524 89099612 -6173039 - B1F SINE Alu -61 88 1 1 1264 275 261 109 78 chr17 89099628 89099918 -6172733 - L1M4c LINE L1 -3222 3160 2890 1 1264 1332 243 76 11 chr17 89099940 89100304 -6172347 + MTD LTR MaLR 18 387 -32 1 1264 359 307 21 14 chr17 89100624 89100766 -6171885 - L1M4c LINE L1 -3833 2543 2401 1 1264 274 238 23 35 chr17 89101041 89101128 -6171523 + MLT1A1 LTR MaLR 323 408 0 1 1264 416 292 32 48 chr17 89101128 89101376 -6171275 - L1M4c LINE L1 -3978 2406 2163 1 1264 396 325 113 8 chr17 89101984 89102338 -6170313 - L1M5 LINE L1 -1780 4366 3976 1 1264 323 267 171 8 chr17 89102387 89102504 -6170147 + B1_Mur1 SINE Alu 14 149 0 1 1264 192 137 39 19 chr17 89102581 89102633 -6170018 + CT-rich Low_complexity Low_complexity 3 55 0 1 1264 202 182 0 0 chr17 89102945 89102978 -6169673 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1264 355 128 126 11 chr17 89102993 89103080 -6169571 - Lx5 LINE L1 -3 7047 6951 1 1264 402 275 189 33 chr17 89103149 89103598 -6169053 - L1M5 LINE L1 -2635 3511 2989 1 1264 998 155 411 32 chr17 89103598 89103736 -6168915 - RMER17C LTR ERVK 0 410 219 1 1264 374 38 0 19 chr17 89103736 89103789 -6168862 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1264 998 143 104 27 chr17 89103789 89103992 -6168659 - RMER17C LTR ERVK -192 218 1 1 1264 1503 132 105 0 chr17 89103992 89104250 -6168401 - RMER17C-int LTR ERVK 0 3238 2954 1 1264 7848 184 85 99 chr17 89104246 89105432 -6167219 - RMER17C-int LTR ERVK -806 2432 1230 1 1264 536 43 0 0 chr17 89105432 89105501 -6167150 - B1_Mm SINE Alu -1 146 78 2 1264 7848 184 85 99 chr17 89105501 89106619 -6166032 - RMER17C-int LTR ERVK -806 1229 94 1 1264 633 156 62 37 chr17 89106675 89106938 -6165713 - RMER17C LTR ERVK -1 409 1 1 1264 232 277 143 22 chr17 89106939 89107212 -6165439 - L1M5 LINE L1 -3154 2992 2687 1 1264 347 287 53 23 chr17 89107215 89107347 -6165304 - B3A SINE B2 0 198 63 2 1264 685 231 19 6 chr17 89107946 89108107 -6164544 - RSINE1 SINE B4 0 165 3 2 1264 316 118 20 0 chr17 89108481 89108532 -6164119 - PB1D7 SINE Alu -41 79 28 2 1264 22 0 0 0 chr17 89108582 89108604 -6164047 + AT_rich Low_complexity Low_complexity 1 22 0 2 1264 2164 157 37 0 chr17 89109912 89110262 -6162389 + ORR1B2 LTR MaLR 5 367 0 2 1264 251 348 41 65 chr17 89111418 89111587 -6161064 - MIRb SINE MIR -68 200 36 2 1264 1004 246 35 31 chr17 89111965 89112255 -6160396 - B4 SINE B4 0 292 2 2 1264 285 263 0 84 chr17 89112352 89112435 -6160216 - ID4 SINE ID -7 76 1 2 1264 4249 48 8 4 chr17 89112542 89113086 -6159565 + L1Md_T LINE L1 6061 6582 0 2 1264 732 290 81 22 chr17 89113700 89114021 -6158630 + MER2 DNA MER2_type 2 341 -4 2 1264 21 0 0 0 chr17 89115008 89115029 -6157622 + AT_rich Low_complexity Low_complexity 1 21 0 2 1264 535 311 70 20 chr17 89115087 89115287 -6157364 - B3 SINE B2 0 216 7 2 1264 1777 179 118 13 chr17 89115343 89115717 -6156934 - MTC LTR MaLR -8 413 1 2 1264 359 231 38 17 chr17 89115988 89116094 -6156557 + L1_Mur3 LINE L1 5764 5878 -8 2 1264 1111 181 5 10 chr17 89116130 89116336 -6156315 - Lx7 LINE L1 -1905 5791 5587 2 1264 1391 294 91 75 chr17 89117894 89118377 -6154274 + Lx7 LINE L1 6557 7016 -680 2 1264 958 103 0 82 chr17 89118377 89118535 -6154116 + B1_Mur3 SINE Alu 5 149 0 2 1264 1391 294 91 75 chr17 89118535 89118601 -6154050 + Lx7 LINE L1 7017 7098 -598 2 1264 234 0 0 0 chr17 89118601 89118627 -6154024 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 1264 1391 294 91 75 chr17 89118627 89118805 -6153846 + Lx7 LINE L1 7099 7295 -401 2 1264 397 284 178 28 chr17 89119226 89119581 -6153070 - Lx8 LINE L1 -73 7400 6993 2 1264 7157 135 144 45 chr17 89119578 89121445 -6151206 + L1_Mur3 LINE L1 2104 4353 -1527 2 1264 22506 64 9 11 chr17 89121451 89124566 -6148085 - L1Md_F3 LINE L1 0 6584 3490 2 1264 225 0 0 0 chr17 89124566 89124591 -6148060 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 2 1264 22506 69 5 7 chr17 89124591 89125102 -6147549 - L1Md_F3 LINE L1 -2394 3489 2966 2 19 36378 85 21 14 chr17 89125100 89131393 -6141258 - L1Md_F3 LINE L1 0 6584 248 2 1265 820 190 6 6 chr17 89131396 89131555 -6141096 - L1Md_F3 LINE L1 -6259 379 221 2 1265 10405 99 19 3 chr17 89131552 89133261 -6139390 + L1_Mus2 LINE L1 4341 6084 -482 2 1265 2091 68 3 82 chr17 89133261 89133579 -6139072 + L1_Mus2 LINE L1 6274 6566 0 2 1265 611 238 18 65 chr17 89133594 89133823 -6138828 + MYSERV-int LTR ERVK 6326 6543 -7 2 1265 1922 158 53 3 chr17 89133829 89134171 -6138480 + RLTR15 LTR ERVK 1 359 0 2 1265 1600 320 42 28 chr17 89134209 89134723 -6137928 - Lx8 LINE L1 -783 6690 6178 2 1265 369 0 0 0 chr17 89134723 89134764 -6137887 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1265 1600 320 42 28 chr17 89134764 89134899 -6137752 - Lx8 LINE L1 -1296 6177 6032 2 1265 645 306 123 11 chr17 89135759 89136036 -6136615 - Tigger7 DNA MER2_type -2143 348 41 2 1265 648 59 0 0 chr17 89136080 89136165 -6136486 + (GA)n Simple_repeat Simple_repeat 1 85 0 2 1265 1189 271 7 17 chr17 89136165 89136445 -6136206 - B4A SINE B4 -11 281 5 2 1265 601 250 116 0 chr17 89136977 89137141 -6135510 + B3 SINE B2 1 183 -33 2 1265 6207 122 16 12 chr17 89137743 89138684 -6133967 - L1VL4 LINE L1 -5355 947 3 2 1265 414 311 75 9 chr17 89139015 89139242 -6133409 + L1ME2z LINE L1 5721 5962 -482 2 1265 228 229 56 14 chr17 89139285 89139356 -6133295 + L1ME2z LINE L1 6054 6127 -317 2 1265 22 0 0 0 chr17 89139368 89139390 -6133261 + AT_rich Low_complexity Low_complexity 1 22 0 2 1265 642 239 53 29 chr17 89139454 89139661 -6132990 + L1ME2z LINE L1 6230 6441 -3 2 1265 21 36 0 0 chr17 89140174 89140202 -6132449 + AT_rich Low_complexity Low_complexity 1 28 0 2 1265 1229 196 129 19 chr17 89140225 89140542 -6132109 + Lx2B LINE L1 6602 6953 -47 2 1265 231 312 135 0 chr17 89140800 89140896 -6131755 + MER3 DNA MER1_type 2 110 -99 2 1265 415 236 96 48 chr17 89140958 89141167 -6131484 - MER5C DNA MER1_type -2 311 93 2 1265 198 0 0 0 chr17 89142577 89142599 -6130052 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 2 1265 198 0 0 0 chr17 89143128 89143150 -6129501 + (T)n Simple_repeat Simple_repeat 1 22 0 2 1265 486 216 98 0 chr17 89143509 89143611 -6129040 - ID_B1 SINE B4 -10 214 103 2 1265 387 41 0 0 chr17 89143648 89143697 -6128954 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1265 493 291 77 62 chr17 89143713 89143973 -6128678 - B4 SINE B4 -4 288 25 2 1265 1589 294 61 0 chr17 89144281 89144354 -6128297 + Lx8 LINE L1 6455 6527 -946 2 1265 3774 34 2 0 chr17 89144354 89144792 -6127859 - L1Md_A LINE L1 0 6582 6144 2 1265 1589 282 218 13 chr17 89144792 89145451 -6127200 + Lx8 LINE L1 6528 7330 -143 2 1265 2491 80 0 29 chr17 89145451 89145800 -6126851 + L1Md_F2 LINE L1 6240 6578 -4 2 1265 839 261 129 36 chr17 89145800 89145894 -6126757 + Lx8 LINE L1 7331 7428 -45 2 1265 202 319 0 14 chr17 89146404 89146477 -6126174 + MER5A DNA MER1_type 1 72 -117 2 1265 544 306 57 28 chr17 89147071 89147283 -6125368 + ID_B1 SINE B4 1 218 -6 2 1265 269 279 22 44 chr17 89147375 89147465 -6125186 + MamRep1879 DNA hAT? 128 215 -1 2 1265 612 285 20 15 chr17 89148194 89148390 -6124261 + B4 SINE B4 92 288 -4 2 1265 1230 76 7 0 chr17 89148411 89149008 -6123643 + (CA)n Simple_repeat Simple_repeat 1 600 0 2 1265 2610 81 0 3 chr17 89150544 89150979 -6121672 + L1_Mus4 LINE L1 6269 6636 0 2 1265 378 61 0 0 chr17 89151319 89151368 -6121283 + (TCTG)n Simple_repeat Simple_repeat 2 50 0 2 1265 798 182 7 0 chr17 89151909 89152046 -6120605 + B1_Mur2 SINE Alu 1 138 -11 2 1265 424 300 20 20 chr17 89154372 89154525 -6118126 + Lx8 LINE L1 6708 6860 -613 2 1265 287 65 22 0 chr17 89157139 89157185 -6115466 + (TGGGGG)n Simple_repeat Simple_repeat 6 52 0 2 1265 23 0 0 0 chr17 89158481 89158504 -6114147 + AT_rich Low_complexity Low_complexity 1 23 0 2 1265 434 210 0 8 chr17 89158524 89158644 -6114007 + (CA)n Simple_repeat Simple_repeat 1 119 0 2 1265 304 331 65 7 chr17 89159020 89159175 -6113476 + L1MA5 LINE L1 6112 6275 -25 2 1265 1194 164 33 28 chr17 89159969 89160182 -6112469 - B3 SINE B2 0 216 3 2 1265 452 283 101 21 chr17 89160246 89160434 -6112217 + MIR SINE MIR 14 216 -46 2 1265 385 206 124 0 chr17 89162326 89162423 -6110228 + MTC LTR MaLR 295 403 -18 2 1265 766 289 108 32 chr17 89162405 89162784 -6109867 + MTD LTR MaLR 6 413 -6 2 1265 655 206 15 46 chr17 89166267 89166442 -6106209 + B3A SINE B2 1 175 -41 2 1265 180 0 0 0 chr17 89166442 89166462 -6106189 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 1265 588 269 39 63 chr17 89166462 89166492 -6106159 + B3 SINE B2 176 201 -15 2 1265 219 167 0 0 chr17 89167225 89167267 -6105384 + (ATG)n Simple_repeat Simple_repeat 2 43 0 2 1265 290 254 14 0 chr17 89168514 89168585 -6104066 + MIR SINE MIR 30 101 -107 2 1265 201 74 0 0 chr17 89169313 89169340 -6103311 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1265 561 215 73 81 chr17 89170344 89170527 -6102124 - B3A SINE B2 -6 192 25 2 1265 414 109 9 47 chr17 89171492 89171598 -6101053 + (TG)n Simple_repeat Simple_repeat 2 103 0 2 1265 289 179 31 31 chr17 89171627 89171754 -6100897 + (TG)n Simple_repeat Simple_repeat 1 127 0 2 1265 186 43 0 0 chr17 89171979 89172002 -6100649 + (GGA)n Simple_repeat Simple_repeat 2 24 0 2 1265 2028 132 28 0 chr17 89172415 89172733 -6099918 - ORR1A2 LTR MaLR 0 327 1 2 1265 467 272 37 57 chr17 89174267 89174513 -6098138 - L1MA4 LINE L1 -31 6269 6029 2 1265 3126 187 47 53 chr17 89175908 89176604 -6096047 + RLTR17 LTR ERVK 1 692 0 2 1265 634 264 157 89 chr17 89177121 89177435 -6095216 + MTD LTR MaLR 1 335 -44 2 1265 526 243 142 68 chr17 89180181 89180477 -6092174 + MER33 DNA MER1_type 4 321 -3 2 1265 3791 280 93 28 chr17 89180795 89180949 -6091702 + Lx8 LINE L1 6079 6230 -1243 2 1265 1854 166 71 61 chr17 89180949 89181328 -6091323 + ORR1C2 LTR MaLR 2 384 0 2 1265 3791 280 93 28 chr17 89181328 89182479 -6090172 + Lx8 LINE L1 6231 7469 -4 2 1265 1078 116 0 0 chr17 89183970 89184117 -6088534 - B1_Mus1 SINE Alu -1 147 1 2 1265 613 256 45 0 chr17 89185141 89185297 -6087354 + B3 SINE B2 1 163 -53 2 1265 297 118 0 0 chr17 89185297 89185348 -6087303 + (CATA)n Simple_repeat Simple_repeat 4 54 0 2 1265 189 0 0 0 chr17 89185398 89185419 -6087232 + (TG)n Simple_repeat Simple_repeat 1 21 0 2 1265 589 282 79 6 chr17 89185449 89185613 -6087038 - B3A SINE B2 -22 176 1 2 1265 252 329 33 67 chr17 89186544 89186562 -6086089 - B4 SINE B4 -69 223 132 2 1265 469 219 0 81 chr17 89186562 89186686 -6085965 - B1F SINE Alu -34 115 2 2 1265 368 72 0 18 chr17 89187092 89187149 -6085502 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1265 282 251 98 103 chr17 89190266 89190470 -6082181 - L1MB8 LINE L1 -12 6166 5964 2 1265 256 244 22 34 chr17 89191371 89191460 -6081191 + (CCCG)n Simple_repeat Simple_repeat 2 89 0 2 1265 249 33 0 0 chr17 89193123 89193153 -6079498 + (CATAT)n Simple_repeat Simple_repeat 2 31 0 2 1265 244 341 32 59 chr17 89193877 89194064 -6078587 - MER5A DNA MER1_type -6 183 2 2 1265 244 287 44 44 chr17 89194119 89194210 -6078441 + B1F SINE Alu 1 91 -58 2 1265 307 274 12 0 chr17 89195275 89195359 -6077292 + MLT1K LTR MaLR 490 574 -21 2 1265 1858 178 29 17 chr17 89198130 89198474 -6074177 - Lx4B LINE L1 -396 6662 6315 2 1265 287 261 98 0 chr17 89198493 89198585 -6074066 + B1F2 SINE Alu 41 141 -8 2 1265 228 163 0 0 chr17 89198585 89198628 -6074023 + (CAGG)n Simple_repeat Simple_repeat 4 46 0 2 1265 200 34 0 33 chr17 89199108 89199138 -6073513 + (TC)n Simple_repeat Simple_repeat 1 29 0 2 1265 21 36 0 0 chr17 89202527 89202555 -6070096 + AT_rich Low_complexity Low_complexity 1 28 0 2 1265 352 191 22 55 chr17 89204816 89204999 -6067652 + (TGG)n Simple_repeat Simple_repeat 2 178 0 2 1265 4684 70 3 2 chr17 89205178 89205777 -6066874 + L1_Mus2 LINE L1 5967 6566 0 2 1265 477 317 154 6 chr17 89206376 89206675 -6065976 + L1MB8 LINE L1 5651 5990 -188 3 1265 331 254 83 48 chr17 89206687 89206832 -6065819 + L1MB8 LINE L1 6035 6184 0 3 1265 423 52 0 0 chr17 89207202 89207260 -6065391 + (TC)n Simple_repeat Simple_repeat 2 59 0 3 1265 849 241 110 8 chr17 89207281 89207536 -6065115 - B4 SINE B4 -10 282 2 3 1265 218 359 73 37 chr17 89207540 89207572 -6065079 - B4 SINE B4 -67 225 86 3 1265 283 328 35 0 chr17 89207572 89207675 -6064976 - PB1D10 SINE Alu -40 109 1 3 1265 225 219 0 0 chr17 89208824 89208897 -6063754 + CT-rich Low_complexity Low_complexity 1 73 0 3 1265 773 146 23 23 chr17 89209307 89209440 -6063211 + B1_Mur4 SINE Alu 3 135 -15 3 1265 226 50 24 24 chr17 89209447 89209488 -6063163 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 3 1265 3303 160 121 65 chr17 89210106 89210949 -6061702 - RMER19B LTR ERVK -12 890 1 3 1265 1323 258 189 56 chr17 89211333 89211921 -6060730 - Lx8 LINE L1 0 7473 6808 3 1265 704 217 200 0 chr17 89212001 89212181 -6060470 - B3 SINE B2 0 216 1 3 1265 1057 226 19 5 chr17 89213098 89213311 -6059340 + B3 SINE B2 1 216 0 3 1265 486 194 59 34 chr17 89214243 89214361 -6058290 - PB1D9 SINE Alu 0 120 1 3 1265 364 295 26 9 chr17 89214389 89214502 -6058149 - RSINE1 SINE B4 -29 136 22 3 1265 206 333 78 10 chr17 89214784 89214887 -6057764 - MIR3 SINE MIR -91 117 8 3 1265 873 102 0 0 chr17 89215344 89215472 -6057179 + RLTR24 LTR ERV1 1 128 -401 3 1265 270 0 0 0 chr17 89216120 89216150 -6056501 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1265 549 0 0 0 chr17 89216150 89216210 -6056441 + (GA)n Simple_repeat Simple_repeat 1 61 0 3 1265 445 201 30 21 chr17 89216594 89216830 -6055821 + GA-rich Low_complexity Low_complexity 1 238 0 3 1265 6937 172 76 13 chr17 89217903 89218953 -6053698 + ORR1B2-int LTR MaLR 5 1111 -398 3 1265 725 67 10 0 chr17 89218953 89219057 -6053594 + (GA)n Simple_repeat Simple_repeat 2 106 0 3 1265 6937 172 76 13 chr17 89219057 89219421 -6053230 + ORR1B2-int LTR MaLR 1112 1507 -2 3 1265 634 160 0 16 chr17 89219422 89219543 -6053108 + ORR1B2 LTR MaLR 1 119 -248 3 1265 252 196 0 35 chr17 89219540 89219598 -6053053 + ORR1B2 LTR MaLR 41 96 -271 3 1265 278 223 31 49 chr17 89219600 89219782 -6052869 + ORR1B2 LTR MaLR 1 141 -253 3 1265 1315 195 57 35 chr17 89219782 89220161 -6052490 + ORR1B2 LTR MaLR 1 394 0 3 1265 1122 88 0 0 chr17 89220255 89220402 -6052249 + B1_Mus1 SINE Alu 2 148 0 3 1265 2665 128 34 5 chr17 89221043 89221452 -6051199 + MTC LTR MaLR 1 421 0 3 1265 771 297 106 40 chr17 89221519 89222017 -6050634 - L1MB3 LINE L1 -10 6173 5643 3 1265 282 327 119 32 chr17 89222322 89222588 -6050063 + MLT1H LTR MaLR 44 353 -242 3 1265 283 336 35 82 chr17 89223066 89223348 -6049303 - HAL1 LINE L1 -577 1930 1662 3 1265 21 0 0 0 chr17 89223348 89223369 -6049282 + AT_rich Low_complexity Low_complexity 1 21 0 3 1265 651 323 78 42 chr17 89223682 89224298 -6048353 - L1MA4 LINE L1 -382 5918 5270 3 1265 447 296 40 27 chr17 89224312 89224461 -6048190 - RSINE1 SINE B4 -6 159 9 3 1265 253 325 117 19 chr17 89225500 89225713 -6046938 - HAL1 LINE L1 -880 1627 1394 3 1265 755 191 335 0 chr17 89225734 89225970 -6046681 + ORR1C1 LTR MaLR 5 319 -59 3 1265 1393 73 0 10 chr17 89226870 89227063 -6045588 - L1_Mus2 LINE L1 0 6566 6376 3 1265 1138 206 137 33 chr17 89227063 89227456 -6045195 + BGLII_B LTR ERVK 4 435 -6 3 1265 1126 75 7 7 chr17 89228559 89228706 -6043945 - B1_Mus1 SINE Alu -1 147 1 3 1265 216 0 0 0 chr17 89229145 89229169 -6043482 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 1265 1101 82 0 39 chr17 89229445 89229598 -6043053 - B1_Mus1 SINE Alu -1 147 1 3 1265 377 92 0 44 chr17 89229841 89229909 -6042742 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 1265 1804 195 40 16 chr17 89231273 89231648 -6041003 + ORR1C2 LTR MaLR 1 384 0 3 1265 912 239 5 15 chr17 89231671 89231871 -6040780 + ID_B1 SINE B4 16 213 -11 3 1265 223 260 0 20 chr17 89231877 89231928 -6040723 - ID SINE ID -160 64 15 3 1265 279 0 0 0 chr17 89231973 89232004 -6040647 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 1265 540 68 0 0 chr17 89232004 89232076 -6040575 + (CA)n Simple_repeat Simple_repeat 2 74 0 3 1265 260 253 12 60 chr17 89232092 89232176 -6040475 + ID2 SINE ID 4 83 0 3 1265 723 186 43 0 chr17 89232585 89232725 -6039926 + B1_Mur4 SINE Alu 5 150 0 3 1265 435 301 0 24 chr17 89233321 89233447 -6039204 - B1F SINE Alu -3 146 24 3 1265 369 0 0 0 chr17 89233472 89233513 -6039138 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1265 1084 181 250 3 chr17 89234610 89234910 -6037741 + ORR1D1 LTR MaLR 1 374 0 3 1265 181 277 90 97 chr17 89235040 89235184 -6037467 - MIRb SINE MIR -11 257 115 3 1265 1022 258 37 106 chr17 89235225 89235632 -6037019 + MTE2a LTR MaLR 1 379 0 3 1265 1284 79 0 0 chr17 89235898 89236101 -6036550 + (TTCTC)n Simple_repeat Simple_repeat 1 203 0 3 1265 258 105 0 0 chr17 89236421 89236459 -6036192 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 3 1265 387 0 0 0 chr17 89236607 89236650 -6036001 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 1265 3008 91 37 39 chr17 89237053 89237535 -6035116 - RLTR45 LTR ERVK 0 482 2 3 1265 423 0 0 0 chr17 89237535 89237582 -6035069 + (TCTA)n Simple_repeat Simple_repeat 3 49 0 3 1265 758 136 0 41 chr17 89238319 89238926 -6033725 + CT-rich Low_complexity Low_complexity 1 582 0 3 1265 598 226 29 29 chr17 89238933 89239070 -6033581 - B1_Mur2 SINE Alu -11 138 2 3 1265 321 198 0 0 chr17 89241205 89241291 -6031360 + (CA)n Simple_repeat Simple_repeat 2 87 0 3 1265 473 333 61 31 chr17 89242133 89242362 -6030289 - B4A SINE B4 -56 236 1 3 1265 335 297 44 18 chr17 89242878 89242991 -6029660 + B4 SINE B4 49 164 -128 3 1265 359 21 21 0 chr17 89243125 89243173 -6029478 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1265 308 154 31 0 chr17 89244488 89244553 -6028098 + (CATA)n Simple_repeat Simple_repeat 4 70 0 3 1265 248 353 95 29 chr17 89244592 89244802 -6027849 + L4 LINE RTE 1311 1534 -495 3 1265 381 93 0 0 chr17 89246200 89246254 -6026397 + (TC)n Simple_repeat Simple_repeat 2 55 0 3 1265 831 167 0 22 chr17 89246434 89246569 -6026082 + B1_Mur4 SINE Alu 3 134 -16 3 1265 686 216 312 24 chr17 89246659 89246946 -6025705 + MTEb LTR MaLR 1 371 -8 3 1265 221 214 44 44 chr17 89247184 89247321 -6025330 + (CAAAC)n Simple_repeat Simple_repeat 2 138 0 3 1265 408 150 12 12 chr17 89247827 89247908 -6024743 + ORR1C1 LTR MaLR 1 81 -303 3 1265 496 141 0 0 chr17 89247907 89247992 -6024659 + ORR1C1 LTR MaLR 240 324 -2 3 1265 4335 231 75 52 chr17 89247995 89249332 -6023319 + ORR1C1-int LTR MaLR 2 1368 -2 3 1265 2120 131 6 9 chr17 89249332 89249679 -6022972 + ORR1C1 LTR MaLR 33 378 0 3 1265 26 0 0 0 chr17 89251541 89251567 -6021084 + AT_rich Low_complexity Low_complexity 1 26 0 3 1265 211 271 25 136 chr17 89251987 89252068 -6020583 - ID4_ SINE ID -8 75 4 3 1265 433 240 0 10 chr17 89253590 89253691 -6018960 + L1VL2 LINE L1 94 193 -6142 3 1265 1544 96 0 100 chr17 89253693 89253982 -6018669 + MusHAL1 LINE L1 1980 2239 -473 3 1265 2060 120 56 35 chr17 89253982 89254495 -6018156 - RMER17B LTR ERVK -374 532 1 3 1265 4569 84 1 1 chr17 89254496 89255268 -6017383 + L1_Mus2 LINE L1 5225 5997 -569 3 1265 895 158 7 33 chr17 89255401 89255552 -6017099 - B1_Mur3 SINE Alu -2 147 1 3 1265 1036 90 0 0 chr17 89256011 89256144 -6016507 + L1_Mus2 LINE L1 5983 6115 -451 3 1265 292 298 191 19 chr17 89256363 89256630 -6016021 - L2a LINE L2 -162 3264 2952 3 1265 189 0 0 0 chr17 89256828 89256849 -6015802 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 1265 181 318 0 0 chr17 89258524 89258568 -6014083 - L2c LINE L2 -74 3313 3270 3 1265 308 354 0 0 chr17 89259132 89259214 -6013437 + MER58B DNA MER1_type 2 82 -259 3 1265 404 265 114 51 chr17 89259244 89259419 -6013232 + MER58B DNA MER1_type 139 324 -17 3 158 284 318 46 8 chr17 89259914 89260044 -6012607 + ERVL-E-int LTR ERVL 4728 4862 -805 3 1266 441 0 0 0 chr17 89261538 89261587 -6011064 + (TTCC)n Simple_repeat Simple_repeat 1 49 0 3 1266 630 143 0 0 chr17 89261588 89261693 -6010958 + (TC)n Simple_repeat Simple_repeat 2 106 0 3 1266 252 0 0 0 chr17 89261873 89261901 -6010750 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 3 1266 215 125 25 0 chr17 89263211 89263251 -6009400 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1266 465 19 0 0 chr17 89263267 89263321 -6009330 + (TC)n Simple_repeat Simple_repeat 2 55 0 3 1266 234 0 0 0 chr17 89263321 89263346 -6009305 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 1266 245 329 65 46 chr17 89263653 89263806 -6008845 + LTR33 LTR ERVL 16 171 -344 3 1266 295 274 119 13 chr17 89263907 89264066 -6008585 + LTR33 LTR ERVL 337 512 -3 3 1266 513 47 0 0 chr17 89265058 89265122 -6007529 + (TCTA)n Simple_repeat Simple_repeat 2 65 0 3 1266 231 333 39 0 chr17 89265123 89265201 -6007450 - B1F SINE Alu -51 98 18 3 1266 232 27 54 0 chr17 89266190 89266227 -6006424 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 3 1266 1160 43 0 0 chr17 89266227 89266365 -6006286 - B1_Mus1 SINE Alu -9 139 2 3 1266 12517 98 9 10 chr17 89266366 89266389 -6006262 - L1VL2 LINE L1 -846 2769 2747 3 1266 1894 113 6 53 chr17 89266389 89266707 -6005944 - L1_Mus3 LINE L1 0 6638 6336 3 1266 12517 114 15 11 chr17 89266707 89269382 -6003269 - L1VL2 LINE L1 -869 2746 61 3 1266 554 273 149 5 chr17 89269390 89269585 -6003066 - ID_B1 SINE B4 0 224 2 3 1266 338 328 8 8 chr17 89270030 89270150 -6002501 + MIR3 SINE MIR 68 187 -21 3 1266 670 204 12 6 chr17 89271310 89271473 -6001178 + CT-rich Low_complexity Low_complexity 3 166 0 3 1266 4752 125 41 9 chr17 89271912 89272663 -5999988 - Lx2B LINE L1 -15 6985 6211 3 1266 1112 125 106 78 chr17 89272747 89272935 -5999716 + URR1A DNA MER1_type 1 205 -21 3 1266 1623 37 0 20 chr17 89272935 89273130 -5999521 + B2_Mm1a SINE B2 2 192 -1 3 1266 1112 125 106 78 chr17 89273130 89273158 -5999493 + URR1A DNA MER1_type 206 223 -3 3 1266 432 55 0 0 chr17 89273300 89273355 -5999296 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 1266 226 195 13 13 chr17 89275122 89275200 -5997451 + CT-rich Low_complexity Low_complexity 1 78 0 4 1266 799 318 57 15 chr17 89275266 89275528 -5997123 - B4A SINE B4 -4 288 16 4 1266 261 83 0 0 chr17 89275773 89275809 -5996842 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 1266 184 311 0 39 chr17 89276621 89276698 -5995953 - MER5B DNA MER1_type -13 165 92 4 1266 423 56 0 0 chr17 89277422 89277476 -5995175 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1266 1226 147 9 60 chr17 89278062 89278294 -5994357 - URR1B DNA MER1_type 0 225 6 4 1266 211 218 0 18 chr17 89278574 89278630 -5994021 + (CAAA)n Simple_repeat Simple_repeat 1 55 0 4 1266 702 282 22 0 chr17 89279107 89279288 -5993363 + Tigger5 DNA MER2_type 4 188 -2218 4 1266 5645 77 4 0 chr17 89282127 89282858 -5989793 + L1_Mus1 LINE L1 5833 6566 -1 4 1266 438 20 0 0 chr17 89282916 89282967 -5989684 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1266 3451 119 40 19 chr17 89283359 89283940 -5988711 + Lx3_Mus LINE L1 5807 6399 -610 4 1266 777 46 9 1 chr17 89283937 89284040 -5988611 - Lx3_Mus LINE L1 -1120 5889 5778 4 1266 355 275 43 64 chr17 89284088 89284228 -5988423 - B4 SINE B4 -155 137 1 4 1266 250 229 31 92 chr17 89285094 89285224 -5987427 + MIRc SINE MIR 60 181 -87 4 1266 1707 178 24 0 chr17 89286635 89286933 -5985718 + RMER19B LTR ERVK 1 305 -597 4 1266 2082 136 44 3 chr17 89286927 89287288 -5985363 + RMER19B LTR ERVK 514 889 -13 4 1266 206 227 0 0 chr17 89287982 89288026 -5984625 + (CATA)n Simple_repeat Simple_repeat 3 46 0 4 1266 573 204 20 0 chr17 89288124 89288276 -5984375 + CT-rich Low_complexity Low_complexity 2 156 0 4 1266 228 137 0 0 chr17 89288274 89288325 -5984326 + (CCTTG)n Simple_repeat Simple_repeat 4 54 0 4 1266 1488 22 0 0 chr17 89288325 89288505 -5984146 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 4 1266 596 106 11 0 chr17 89288507 89288601 -5984050 + (TCCC)n Simple_repeat Simple_repeat 3 97 0 4 1266 671 217 0 30 chr17 89288617 89288750 -5983901 - B1_Mur4 SINE Alu -1 149 21 4 1266 384 22 0 0 chr17 89290292 89290337 -5982314 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1266 613 156 23 23 chr17 89290576 89290753 -5981898 + (CAGAGA)n Simple_repeat Simple_repeat 3 179 0 4 1266 416 202 0 12 chr17 89292190 89292275 -5980376 + MTC LTR MaLR 17 100 -321 4 1266 331 253 103 69 chr17 89293236 89293440 -5979211 - MER33 DNA MER1_type -25 299 89 4 1266 427 112 12 12 chr17 89293445 89293526 -5979125 + (TG)n Simple_repeat Simple_repeat 1 81 0 4 1266 19542 108 19 13 chr17 89293626 89297623 -5975028 - Lx3B LINE L1 -1 6972 2947 4 1266 531 88 35 17 chr17 89299067 89299183 -5973468 + (TCTCTG)n Simple_repeat Simple_repeat 4 121 0 4 1266 324 61 20 0 chr17 89299187 89299236 -5973415 - HAL1-3A_ME LINE L1 -835 2023 1974 4 1266 210 242 0 0 chr17 89301023 89301089 -5971562 + CT-rich Low_complexity Low_complexity 2 67 0 4 1266 209 354 135 5 chr17 89301182 89301375 -5971276 - MIRc SINE MIR -8 260 43 4 1266 631 245 50 60 chr17 89301452 89301652 -5970999 + B3A SINE B2 1 198 0 4 1266 201 343 91 0 chr17 89305286 89305385 -5967266 + MIRb SINE MIR 18 125 -143 4 1266 244 227 101 51 chr17 89305539 89305618 -5967033 - MIRc SINE MIR -130 138 56 4 1266 190 309 79 40 chr17 89305786 89305887 -5966764 + L2a LINE L2 3303 3407 -19 4 1266 359 259 60 35 chr17 89305922 89306038 -5966613 - L2c LINE L2 -10 3377 3259 4 1266 321 245 55 64 chr17 89306214 89306323 -5966328 + MER91C DNA Tip100 1 108 -32 4 1266 2471 86 206 0 chr17 89307051 89307445 -5965206 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1266 503 298 167 19 chr17 89307717 89308008 -5964643 + MLT1A0 LTR MaLR 1 367 -7 4 1266 308 327 71 29 chr17 89309805 89309975 -5962676 - MIRb SINE MIR -9 259 83 4 1266 467 148 35 9 chr17 89314083 89314199 -5958452 + (TATG)n Simple_repeat Simple_repeat 2 120 0 4 1266 478 319 52 5 chr17 89315772 89315964 -5956687 + MIR SINE MIR 36 236 -26 4 1266 486 0 0 0 chr17 89316496 89316550 -5956101 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 1266 230 275 25 23 chr17 89316771 89316867 -5955784 + MIR SINE MIR 63 161 -107 4 1266 7191 58 21 8 chr17 89317402 89318304 -5954347 + L1_Mus1 LINE L1 5654 6567 0 4 1266 561 195 28 11 chr17 89319054 89319230 -5953421 + GA-rich Low_complexity Low_complexity 2 180 0 4 1266 1541 37 26 11 chr17 89320301 89320492 -5952159 - B2_Mm2 SINE B2 0 195 2 4 1266 448 281 87 27 chr17 89320513 89320525 -5952126 - RSINE1 SINE B4 -4 161 152 4 1266 183 100 0 0 chr17 89320525 89320555 -5952096 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1266 448 281 87 27 chr17 89320555 89320692 -5951959 - RSINE1 SINE B4 -14 151 3 4 1266 506 298 73 0 chr17 89321412 89321590 -5951061 - MER89 LTR ERV1 -203 356 166 4 1266 28 0 0 0 chr17 89322065 89322093 -5950558 + AT_rich Low_complexity Low_complexity 1 28 0 4 1266 511 157 56 0 chr17 89322123 89322231 -5950420 - Lx LINE L1 -1 7695 7582 4 1266 609 52 0 0 chr17 89322232 89322309 -5950342 + (TTCC)n Simple_repeat Simple_repeat 1 77 0 4 1266 935 109 7 0 chr17 89322309 89322455 -5950196 + (TTC)n Simple_repeat Simple_repeat 1 148 0 4 1266 3047 186 2 16 chr17 89322473 89323024 -5949627 - Lx LINE L1 -16 6638 6096 4 1266 9043 219 51 184 chr17 89323044 89324162 -5948489 - L1_Mur3 LINE L1 0 5880 4934 4 1266 293 303 0 0 chr17 89324162 89324251 -5948400 - PB1D10 SINE Alu -2 115 27 4 1266 9043 219 51 184 chr17 89324251 89324906 -5947745 - L1_Mur3 LINE L1 0 4933 4377 4 1266 195 42 0 0 chr17 89324906 89324930 -5947721 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 4 1266 9043 219 51 184 chr17 89324930 89325649 -5947002 - L1_Mur3 LINE L1 -1504 4376 3827 4 1266 210 37 0 0 chr17 89325649 89325676 -5946975 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1266 1156 58 0 0 chr17 89325676 89325814 -5946837 - B1_Mus1 SINE Alu -9 139 2 4 1266 9043 219 51 184 chr17 89325814 89326663 -5945988 - L1_Mur3 LINE L1 -2054 3826 3006 4 1266 1367 46 6 0 chr17 89326663 89326838 -5945813 + (TTCTCC)n Simple_repeat Simple_repeat 3 178 0 4 1266 9043 219 51 184 chr17 89326838 89328693 -5943958 - L1_Mur3 LINE L1 -2875 3005 1316 4 1266 2293 48 31 0 chr17 89328693 89328982 -5943669 - L1Md_F3 LINE L1 0 6584 6287 4 1266 9043 186 111 30 chr17 89328982 89329236 -5943415 - L1_Mur3 LINE L1 -4565 1315 1018 4 1266 246 32 0 0 chr17 89329236 89329267 -5943384 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4 1266 3222 186 111 30 chr17 89329267 89329596 -5943055 - L1_Mur3 LINE L1 -6711 1017 660 4 1266 558 0 0 0 chr17 89329596 89329658 -5942993 + (GA)n Simple_repeat Simple_repeat 1 62 0 4 1266 3222 186 111 30 chr17 89329658 89329838 -5942813 - L1_Mur3 LINE L1 -7069 659 473 4 1266 1299 49 0 0 chr17 89329847 89330010 -5942641 + (TTCTC)n Simple_repeat Simple_repeat 3 165 0 4 1266 297 0 0 0 chr17 89330011 89330044 -5942607 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 4 1266 405 0 0 0 chr17 89330140 89330185 -5942466 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1266 28 0 0 0 chr17 89330333 89330361 -5942290 + AT_rich Low_complexity Low_complexity 1 28 0 4 1266 186 191 0 0 chr17 89330465 89330507 -5942144 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1266 583 317 129 32 chr17 89330648 89331020 -5941631 - MLT1A1 LTR MaLR 0 408 1 4 1266 795 11 0 0 chr17 89331319 89331411 -5941240 + (TTTC)n Simple_repeat Simple_repeat 2 93 0 4 1266 1294 238 142 56 chr17 89331888 89332409 -5940242 + RMER2 LTR ERV1 2 567 0 4 1266 408 330 53 37 chr17 89333926 89334115 -5938536 - ORR1E LTR MaLR -167 192 1 4 1266 1710 261 102 52 chr17 89334125 89334257 -5938394 - MTE-int LTR MaLR -67 1513 1393 4 1266 2936 31 14 8 chr17 89334257 89334614 -5938037 - L1Md_F2 LINE L1 -13 6569 6211 4 1266 1710 261 102 52 chr17 89334614 89335151 -5937500 - MTE-int LTR MaLR -188 1392 811 4 1266 671 270 88 72 chr17 89335978 89336341 -5936310 - MTE2a LTR MaLR 0 379 11 4 1266 324 296 44 71 chr17 89336533 89336715 -5935936 - LTR81A LTR ERV1? -1133 217 41 4 1266 278 247 25 38 chr17 89337824 89337904 -5934747 - MIR3 SINE MIR -49 159 81 4 1266 449 84 14 0 chr17 89338290 89338361 -5934290 + (GA)n Simple_repeat Simple_repeat 1 72 0 4 1266 373 312 41 7 chr17 89338442 89338587 -5934064 - RSINE1 SINE B4 -6 159 10 4 1266 366 287 78 33 chr17 89338740 89338920 -5933731 + LTR37A LTR ERV1 237 424 -2 4 1266 6755 45 8 2 chr17 89338994 89339814 -5932837 + L1_Mus2 LINE L1 5741 6565 -1 4 1266 1235 179 9 0 chr17 89340834 89341058 -5931593 + URR1A DNA MER1_type 1 226 0 4 1266 250 318 0 11 chr17 89341949 89342038 -5930613 - MIRb SINE MIR -48 220 133 4 1266 270 0 0 0 chr17 89342885 89342915 -5929736 + (CAA)n Simple_repeat Simple_repeat 1 30 0 4 1266 1217 233 292 18 chr17 89342970 89343422 -5929229 - Lx7 LINE L1 -359 7337 6763 4 1266 2474 32 100 3 chr17 89343660 89343723 -5928928 - L1Md_F2 LINE L1 -9 6573 6512 4 1266 183 42 0 0 chr17 89343723 89343747 -5928904 + (CCCA)n Simple_repeat Simple_repeat 4 27 0 4 1266 2474 32 100 3 chr17 89343747 89343993 -5928658 - L1Md_F2 LINE L1 -71 6511 6235 4 1266 255 363 11 0 chr17 89344456 89344547 -5928104 + MIR3 SINE MIR 103 194 -14 4 1266 288 137 0 0 chr17 89346268 89346319 -5926332 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1266 261 0 0 0 chr17 89346407 89346436 -5926215 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1266 480 317 31 12 chr17 89346451 89346614 -5926037 - B4 SINE B4 -124 168 3 4 1266 611 131 180 0 chr17 89347205 89347327 -5925324 - ORR1C2 LTR MaLR 0 384 241 4 1266 545 147 28 0 chr17 89347346 89347455 -5925196 - ORR1C2 LTR MaLR -260 124 13 4 1266 4867 189 112 76 chr17 89347463 89348709 -5923942 - Lx2 LINE L1 0 6997 5692 4 1266 213 65 0 0 chr17 89348709 89348740 -5923911 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1266 1053 87 0 0 chr17 89348740 89348878 -5923773 - B1_Mus1 SINE Alu -9 139 2 4 1266 4867 127 5 46 chr17 89348878 89349460 -5923191 - Lx2 LINE L1 -192 5691 5131 4 1266 370 196 55 197 chr17 89349475 89349729 -5922922 + Lx9 LINE L1 7425 7642 -2 4 1266 344 262 119 18 chr17 89349773 89349882 -5922769 - PB1D9 SINE Alu 0 120 1 4 1266 729 215 192 0 chr17 89352417 89352594 -5920057 - RMER1C Other Other -8 1334 1124 4 1266 853 282 142 13 chr17 89352615 89352924 -5919727 - Lx8 LINE L1 -112 7361 7013 4 1266 222 118 0 0 chr17 89352957 89352991 -5919660 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1266 187 225 0 27 chr17 89354793 89354866 -5917785 + GA-rich Low_complexity Low_complexity 3 73 0 5 1266 633 281 79 20 chr17 89354899 89355102 -5917549 + B3 SINE B2 1 215 -1 5 1266 297 0 0 0 chr17 89356239 89356272 -5916379 + (T)n Simple_repeat Simple_repeat 1 33 0 5 1266 265 317 42 52 chr17 89356477 89356690 -5915961 + L1M6 LINE L1 1506 1716 -4780 5 1266 427 189 170 65 chr17 89356758 89356902 -5915749 - MTEa LTR MaLR -8 371 211 5 1266 947 107 0 14 chr17 89356902 89357085 -5915566 + (GA)n Simple_repeat Simple_repeat 1 184 -104 5 1266 947 107 0 14 chr17 89357093 89357195 -5915456 + (GA)n Simple_repeat Simple_repeat 185 288 0 5 1266 571 342 11 0 chr17 89357195 89357385 -5915266 - MTEa LTR MaLR -170 209 18 5 1266 267 273 56 62 chr17 89357770 89357884 -5914767 + B1F2 SINE Alu 1 115 -5 5 1266 240 237 102 0 chr17 89357888 89357947 -5914704 + ID4 SINE ID 8 72 -11 5 1266 477 0 0 0 chr17 89357949 89358002 -5914649 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1266 681 252 12 6 chr17 89358009 89358169 -5914482 - B3A SINE B2 -36 162 2 5 1266 294 354 7 0 chr17 89358187 89358331 -5914320 - L1M5 LINE L1 -853 5293 5149 5 1266 1413 66 44 0 chr17 89358618 89358799 -5913852 - B2_Mm1a SINE B2 -4 189 1 5 1266 22 0 0 0 chr17 89358808 89358830 -5913821 + AT_rich Low_complexity Low_complexity 1 22 0 5 1266 195 162 0 0 chr17 89360693 89360730 -5911921 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1266 396 277 0 21 chr17 89360741 89360837 -5911814 - RSINE1 SINE B4 0 165 72 5 1266 238 311 90 75 chr17 89362521 89362799 -5909852 + ORR1E LTR MaLR 67 348 -11 5 1266 740 228 46 46 chr17 89363035 89363251 -5909400 - B3A SINE B2 0 216 1 5 1266 396 0 0 0 chr17 89363325 89363369 -5909282 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1266 1579 215 54 106 chr17 89363946 89364446 -5908205 + RMER19C LTR ERVK 138 611 0 5 1266 384 215 57 16 chr17 89364559 89364682 -5907969 - Lx9 LINE L1 0 7644 7517 5 1266 708 98 0 0 chr17 89364717 89364819 -5907832 + (CA)n Simple_repeat Simple_repeat 2 103 0 5 1266 554 243 0 0 chr17 89366061 89366172 -5906479 + PB1D9 SINE Alu 10 120 0 5 1266 201 108 0 0 chr17 89366238 89366275 -5906376 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 5 1266 499 221 20 134 chr17 89366311 89366528 -5906123 - Lx7 LINE L1 -125 7571 7367 5 1266 240 86 0 0 chr17 89366528 89366563 -5906088 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1266 1197 73 0 0 chr17 89366563 89366741 -5905910 + (GA)n Simple_repeat Simple_repeat 1 178 0 5 1266 499 221 20 134 chr17 89366741 89366814 -5905837 - Lx7 LINE L1 -330 7366 7314 5 1266 3393 23 23 0 chr17 89366814 89367201 -5905450 - MTA_Mm LTR MaLR 0 396 1 5 1266 392 252 111 9 chr17 89367201 89367295 -5905356 - Lx7 LINE L1 -951 6745 6640 5 1266 797 174 50 0 chr17 89367323 89367484 -5905167 - L1_Mur3 LINE L1 -535 5345 5177 5 1266 418 160 137 11 chr17 89367468 89367563 -5905088 - L1_Mur3 LINE L1 -1400 4480 4374 5 1266 451 167 7 130 chr17 89368018 89368156 -5904495 - L1_Mur3 LINE L1 -1503 4377 4257 5 1266 2105 146 63 63 chr17 89368156 89368550 -5904101 + ORR1B1 LTR MaLR 1 394 0 5 1266 1491 221 25 88 chr17 89368563 89369077 -5903574 - MT2B LTR ERVL -7 594 6 5 1266 14628 156 30 30 chr17 89369085 89371283 -5901368 - L1_Mur3 LINE L1 -1627 4253 2059 5 1266 234 0 0 0 chr17 89371283 89371309 -5901342 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 1266 14628 156 30 30 chr17 89371309 89372027 -5900624 - L1_Mur3 LINE L1 -3822 2058 1336 5 1266 1040 220 30 103 chr17 89372034 89372363 -5900288 - L1_Mur3 LINE L1 -7127 601 297 5 1266 182 128 26 0 chr17 89372433 89372472 -5900179 + CT-rich Low_complexity Low_complexity 2 41 0 5 1266 1077 277 64 27 chr17 89372539 89372977 -5899674 - RMER5 LTR ERV1 -49 485 32 5 1266 771 193 0 7 chr17 89373279 89373420 -5899231 - B1_Mur4 SINE Alu -9 141 2 5 1266 420 305 169 33 chr17 89373515 89373698 -5898953 - B3 SINE B2 -4 212 5 5 1266 1999 166 201 95 chr17 89374526 89375147 -5897504 + RMER6C LTR ERVK 3 689 -1 5 1266 1166 101 72 11 chr17 89376635 89376816 -5895835 + B2_Mm2 SINE B2 1 192 -3 5 1266 243 122 0 0 chr17 89376818 89376867 -5895784 + (CAAG)n Simple_repeat Simple_repeat 2 50 0 5 1266 270 250 0 0 chr17 89376897 89376957 -5895694 - MamRep1894 DNA hAT -57 66 7 5 1266 9096 93 23 41 chr17 89376978 89378861 -5893790 + Lx3_Mus LINE L1 5157 6989 -20 5 1266 324 0 0 0 chr17 89378862 89378898 -5893753 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 5 1266 252 127 63 0 chr17 89378905 89378968 -5893683 - RCHARR1 DNA MER1_type -136 838 772 5 1266 1851 215 44 11 chr17 89379041 89379492 -5893159 - Lx5 LINE L1 -997 6053 5588 5 1266 624 270 34 29 chr17 89379483 89379689 -5892962 + Lx6 LINE L1 7223 7429 -31 5 1266 501 290 47 5 chr17 89380625 89380907 -5891744 - MER33 DNA MER1_type -150 174 6 5 1266 207 100 0 0 chr17 89380967 89380997 -5891654 + (ATGGTG)n Simple_repeat Simple_repeat 2 31 0 5 1266 203 311 22 11 chr17 89381165 89381256 -5891395 + CT-rich Low_complexity Low_complexity 2 93 0 5 1266 244 130 18 36 chr17 89382448 89382504 -5890147 + GA-rich Low_complexity Low_complexity 1 55 0 5 1266 283 236 7 140 chr17 89383543 89383686 -5888965 - MLT2F LTR ERVL -4 659 536 5 1266 313 195 144 33 chr17 89383954 89384044 -5888607 - MLT2F LTR ERVL -562 101 2 5 1266 302 290 71 0 chr17 89384102 89384239 -5888412 + MIRc SINE MIR 38 186 -82 5 1266 1355 175 75 58 chr17 89385760 89386072 -5886579 - RMER17C LTR ERVK 0 410 90 5 1266 522 0 0 0 chr17 89386072 89386130 -5886521 + (GA)n Simple_repeat Simple_repeat 1 58 0 5 1266 1355 175 75 58 chr17 89386130 89386217 -5886434 - RMER17C LTR ERVK -321 89 4 5 1266 295 330 22 25 chr17 89388459 89388608 -5884043 + MIRm SINE MIR 25 163 -99 5 1266 284 303 87 33 chr17 89389688 89389838 -5882813 + L2 LINE L2 2453 2610 -809 5 1266 315 340 105 11 chr17 89390500 89390690 -5881961 - L1M5 LINE L1 -3499 2647 2440 5 1266 182 208 70 70 chr17 89391047 89391104 -5881547 + L2 LINE L2 2547 2603 -816 5 1267 416 104 0 15 chr17 89391256 89391324 -5881327 + (TCCCC)n Simple_repeat Simple_repeat 1 67 0 5 1267 866 145 0 48 chr17 89391327 89391472 -5881179 - B1_Mm SINE Alu -9 138 1 5 1267 3633 30 2 0 chr17 89391938 89392333 -5880318 - MTA_Mm LTR MaLR 0 396 1 5 1267 2566 34 7 0 chr17 89392610 89392901 -5879750 + L1Md_A LINE L1 6290 6582 0 5 1267 390 290 16 31 chr17 89392980 89393108 -5879543 + RMER30 DNA MER1_type 2 127 -75 5 1267 261 0 0 0 chr17 89393206 89393235 -5879416 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1267 990 299 114 58 chr17 89393390 89393873 -5878778 + MLT2B2 LTR ERVL 6 515 0 5 1267 252 0 0 0 chr17 89394119 89394147 -5878504 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 1267 483 18 0 0 chr17 89394147 89394203 -5878448 + (TA)n Simple_repeat Simple_repeat 1 56 0 5 1267 510 302 8 0 chr17 89394354 89394483 -5878168 + B1F SINE Alu 12 141 -8 5 1267 3680 212 31 47 chr17 89394561 89394659 -5877992 + Lx5 LINE L1 6235 6331 -719 5 1267 1186 95 0 0 chr17 89394659 89394807 -5877844 + B1_Mus1 SINE Alu 1 148 0 5 1267 3680 212 31 47 chr17 89394807 89395536 -5877115 + Lx5 LINE L1 6332 7049 -1 5 1267 210 347 0 26 chr17 89396897 89396974 -5875677 + MER5A DNA MER1_type 14 88 -101 5 1267 969 228 19 44 chr17 89397001 89397207 -5875444 - ID_B1 SINE B4 -8 216 16 5 1267 181 416 20 0 chr17 89397212 89397313 -5875338 + MER5A DNA MER1_type 87 189 0 5 1267 281 401 124 8 chr17 89397342 89397576 -5875075 + LTR16A LTR ERVL 84 344 -107 5 1267 330 250 96 52 chr17 89398105 89398240 -5874411 - B1F2 SINE Alu -8 141 1 5 1267 189 355 53 0 chr17 89399336 89399412 -5873239 - MIR SINE MIR -74 188 109 5 1267 425 325 86 21 chr17 89400623 89400856 -5871795 + MIR SINE MIR 5 252 -10 5 1267 9149 31 0 0 chr17 89402855 89404579 -5868072 - L1Md_T LINE L1 0 6582 4858 5 1267 228 282 38 25 chr17 89404931 89405011 -5867640 - ID4_ SINE ID 0 83 3 5 1267 221 216 11 0 chr17 89405087 89405175 -5867476 + (TA)n Simple_repeat Simple_repeat 1 89 0 5 1267 212 355 0 16 chr17 89405204 89405267 -5867384 - B1F SINE Alu -87 62 1 5 1267 2129 147 78 10 chr17 89406495 89406880 -5865771 - L1_Mm LINE L1 -485 5398 4988 5 1267 8097 66 16 2 chr17 89406879 89408059 -5864592 + L1_Mus3 LINE L1 5436 6632 -6 5 1267 315 0 0 0 chr17 89408063 89408098 -5864553 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1267 588 338 41 15 chr17 89409100 89409370 -5863281 - B4 SINE B4 -14 278 2 5 1267 1233 101 0 0 chr17 89409691 89409870 -5862781 + (TTCCC)n Simple_repeat Simple_repeat 2 180 0 5 1267 433 392 93 57 chr17 89411100 89411487 -5861164 - LTR16E2 LTR ERVL -97 471 71 5 1267 540 273 44 163 chr17 89412087 89412569 -5860082 - L1ME1 LINE L1 -84 6095 5674 5 1267 351 0 0 0 chr17 89412569 89412608 -5860043 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1267 625 240 31 42 chr17 89412608 89412795 -5859856 - L1ME1 LINE L1 -2322 5673 5505 5 1267 334 276 7 140 chr17 89413960 89414103 -5858548 - PB1 SINE Alu -2 125 2 5 1267 542 218 34 39 chr17 89414575 89414748 -5857903 - RLTR9A2 LTR ERVK 0 437 263 5 1267 4342 43 6 0 chr17 89414748 89415264 -5857387 - L1_Mus1 LINE L1 -197 6370 5852 5 1267 1325 52 0 0 chr17 89415358 89415513 -5857138 + L1_Mus1 LINE L1 6412 6566 -1 5 1267 1699 145 36 79 chr17 89415525 89415854 -5856797 - RLTR9B2 LTR ERVK -105 315 1 5 1267 306 376 71 17 chr17 89416223 89416518 -5856133 + L2 LINE L2 2569 2879 -540 5 1267 3000 265 75 10 chr17 89416747 89417575 -5855076 + Lx8 LINE L1 6207 7088 -385 5 1267 341 275 0 9 chr17 89417649 89417759 -5854892 + Lx8 LINE L1 7358 7466 -7 5 1267 894 261 9 24 chr17 89417875 89418087 -5854564 + B3 SINE B2 8 216 0 5 1267 834 180 0 14 chr17 89418216 89418357 -5854294 - B1_Mur4 SINE Alu -1 149 11 5 1267 3013 179 37 7 chr17 89419269 89419358 -5853293 - RLTR20B1 LTR ERVK 0 563 472 5 1267 261 0 0 0 chr17 89419358 89419387 -5853264 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1267 3013 179 37 7 chr17 89419387 89419844 -5852807 - RLTR20B1 LTR ERVK -92 471 1 5 1267 5269 84 1 5 chr17 89421876 89422694 -5849957 - L1_Mus1 LINE L1 -617 5950 5136 5 1267 5412 63 6 2 chr17 89422700 89423340 -5849311 + L1_Mus1 LINE L1 5925 6567 0 5 1267 1811 230 23 8 chr17 89423387 89423786 -5848865 + MTD LTR MaLR 1 405 -14 5 1267 803 308 104 42 chr17 89423807 89424433 -5848218 + Charlie7 DNA MER1_type 1576 2240 -372 6 1267 340 317 0 0 chr17 89424843 89424947 -5847704 - MIR SINE MIR 0 262 159 6 1267 441 0 0 0 chr17 89425891 89425940 -5846711 + (TAA)n Simple_repeat Simple_repeat 2 50 0 6 1267 35533 98 17 16 chr17 89426466 89433006 -5839645 - L1Md_F2 LINE L1 0 6582 217 6 1267 548 89 2 3 chr17 89433007 89433099 -5839552 - L1_Mus2 LINE L1 -68 6568 6462 6 1267 6122 100 2 15 chr17 89433312 89434156 -5838495 - L1_Mus4 LINE L1 0 6636 5804 6 1267 724 103 7 23 chr17 89435244 89435381 -5837270 - B1_Mus1 SINE Alu 0 149 11 6 1267 292 362 22 44 chr17 89435359 89435533 -5837118 - B4A SINE B4 -46 246 77 6 1267 785 274 42 85 chr17 89435533 89435918 -5836733 + MTE2a LTR MaLR 1 375 -44 6 1267 284 296 0 24 chr17 89435943 89436026 -5836625 - B4A SINE B4 -211 81 1 6 1267 645 79 0 0 chr17 89438048 89438149 -5834502 + (TC)n Simple_repeat Simple_repeat 2 102 0 6 1267 362 293 81 0 chr17 89438200 89438299 -5834352 + B4A SINE B4 183 289 -3 6 1267 382 298 146 39 chr17 89440654 89440942 -5831709 + MLT1A LTR MaLR 82 403 -5 6 1267 391 349 34 14 chr17 89441391 89441539 -5831112 + MLT1A LTR MaLR 224 374 0 6 1267 180 97 0 0 chr17 89441562 89441593 -5831058 + (T)n Simple_repeat Simple_repeat 1 31 0 6 1267 219 36 0 0 chr17 89441950 89441978 -5830673 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 6 1267 430 238 12 0 chr17 89442134 89442214 -5830437 - ID4_ SINE ID -2 81 1 6 1267 282 202 76 119 chr17 89443022 89443140 -5829511 + RLTR14 LTR ERV1 217 329 -53 6 1267 831 330 103 42 chr17 89443215 89443689 -5828962 + MLT1H LTR MaLR 6 508 -41 6 1267 1002 132 0 7 chr17 89444583 89444858 -5827793 + (TCCA)n Simple_repeat Simple_repeat 1 273 0 6 1267 224 204 0 0 chr17 89445872 89445916 -5826735 + CT-rich Low_complexity Low_complexity 1 44 0 6 1267 324 0 0 0 chr17 89445918 89445954 -5826697 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1267 317 337 71 89 chr17 89446358 89446583 -5826068 - MER58A DNA MER1_type 0 224 4 6 1267 25 51 0 0 chr17 89446692 89446731 -5825920 + AT_rich Low_complexity Low_complexity 1 39 0 6 1267 542 41 0 14 chr17 89447007 89447081 -5825570 + (CA)n Simple_repeat Simple_repeat 2 74 0 6 1267 964 295 90 73 chr17 89447084 89447844 -5824807 - L1MA6 LINE L1 -378 5922 5082 6 1267 211 257 42 14 chr17 89449099 89449170 -5823481 + MIR3 SINE MIR 112 184 -24 6 1267 745 304 0 63 chr17 89449718 89449925 -5822726 + B3A SINE B2 1 194 -4 6 1267 225 0 0 0 chr17 89449931 89449956 -5822695 + (TGG)n Simple_repeat Simple_repeat 2 26 0 6 1267 1057 39 0 0 chr17 89449956 89450084 -5822567 + B1_Mus1 SINE Alu 19 146 -2 6 1267 270 115 0 0 chr17 89450084 89450136 -5822515 + (CCAA)n Simple_repeat Simple_repeat 4 55 0 6 1267 521 236 21 21 chr17 89451250 89451393 -5821258 - Lx6 LINE L1 -27 7433 7291 6 1267 315 261 94 17 chr17 89451765 89451882 -5820769 + MLT1A1 LTR MaLR 283 408 0 6 1267 2282 161 30 2 chr17 89452784 89453196 -5819455 + L1VL2 LINE L1 98 832 -5503 6 1267 6751 139 7 71 chr17 89453196 89454016 -5818635 + L1_Mus3 LINE L1 4855 5676 -207 6 1267 549 0 0 0 chr17 89454016 89454077 -5818574 + (TC)n Simple_repeat Simple_repeat 2 62 0 6 1267 6751 109 3 80 chr17 89454077 89454143 -5818508 + L1_Mus3 LINE L1 5677 5677 -961 6 1267 6054 61 8 1 chr17 89454143 89454861 -5817790 - L1_Mus1 LINE L1 0 6567 5845 6 1267 6751 109 3 80 chr17 89454861 89455837 -5816814 + L1_Mus3 LINE L1 5677 6638 0 6 1267 295 202 25 0 chr17 89456109 89456188 -5816463 + (CATATA)n Simple_repeat Simple_repeat 1 81 0 6 1267 21 57 0 0 chr17 89456221 89456256 -5816395 + AT_rich Low_complexity Low_complexity 1 35 0 6 1267 243 0 0 0 chr17 89457166 89457193 -5815458 + (T)n Simple_repeat Simple_repeat 1 27 0 6 1267 188 306 0 0 chr17 89457346 89457395 -5815256 - MIR SINE MIR -1 261 213 6 1267 963 239 45 78 chr17 89458619 89458978 -5813673 + RLTR14 LTR ERV1 36 382 0 6 1267 1145 60 0 32 chr17 89459718 89459873 -5812778 - B2_Mm2 SINE B2 -44 151 2 6 1267 530 279 30 18 chr17 89461276 89461440 -5811211 + MIR3 SINE MIR 37 202 -6 6 1267 266 284 0 0 chr17 89462168 89462235 -5810416 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 1267 785 224 42 30 chr17 89462251 89462417 -5810234 - B3A SINE B2 -30 168 1 6 1267 211 50 0 70 chr17 89465100 89465143 -5807508 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 6 1267 333 0 0 0 chr17 89465155 89465192 -5807459 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1267 475 316 66 5 chr17 89465377 89465590 -5807061 - Tigger7 DNA MER2_type -7 2484 2259 6 1267 434 18 18 0 chr17 89465615 89465670 -5806981 + (CA)n Simple_repeat Simple_repeat 2 57 0 6 1267 716 297 23 9 chr17 89465674 89465895 -5806756 - Tigger7 DNA MER2_type -2245 246 23 6 1267 30 0 0 0 chr17 89466316 89466346 -5806305 + AT_rich Low_complexity Low_complexity 1 30 0 6 1267 7558 130 97 16 chr17 89466348 89467186 -5805465 - Lx3A LINE L1 -8 6973 6044 6 1267 180 0 0 0 chr17 89467186 89467206 -5805445 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 6 1267 14404 76 9 9 chr17 89467206 89469248 -5803403 - Lx3A LINE L1 -938 6043 4005 6 1267 861 312 133 68 chr17 89469395 89470104 -5802547 - Lx8 LINE L1 -9 7464 6710 6 1267 574 224 75 0 chr17 89470884 89471018 -5801633 - Lx8 LINE L1 -908 6565 6422 6 1267 207 188 0 0 chr17 89471130 89471178 -5801473 + (AATTG)n Simple_repeat Simple_repeat 3 50 0 6 1267 344 216 0 10 chr17 89471412 89471510 -5801141 + (TATATG)n Simple_repeat Simple_repeat 6 102 0 6 1267 4579 131 85 26 chr17 89472255 89473326 -5799325 + L1VL1 LINE L1 215 1359 -2339 6 1267 2300 107 65 6 chr17 89473327 89473665 -5798986 + L1_Mus2 LINE L1 6208 6565 -1 6 1267 10257 138 323 9 chr17 89473702 89474451 -5798200 + L1_Mus2 LINE L1 2953 3710 -2173 6 1267 8732 29 7 3 chr17 89474451 89475427 -5797224 + L1Md_F3 LINE L1 5605 6584 0 6 1267 10257 124 211 36 chr17 89475427 89477583 -5795068 + L1_Mus2 LINE L1 3711 6565 -1 6 1267 2345 159 10 51 chr17 89477764 89478174 -5794477 - ORR1B1 LTR MaLR -1 393 1 6 1267 531 0 0 0 chr17 89478548 89478607 -5794044 + (TA)n Simple_repeat Simple_repeat 2 60 0 6 1267 197 329 0 28 chr17 89478624 89478696 -5793955 + L2b LINE L2 3240 3309 -66 6 1267 189 0 0 0 chr17 89480679 89480700 -5791951 + (A)n Simple_repeat Simple_repeat 1 21 0 6 1267 3329 68 0 8 chr17 89481793 89482192 -5790459 - MTA_Mm LTR MaLR 0 396 1 6 1267 470 320 8 0 chr17 89483503 89483631 -5789020 + ID_B1 SINE B4 89 217 -7 6 1267 22 56 0 0 chr17 89483746 89483782 -5788869 + AT_rich Low_complexity Low_complexity 1 36 0 6 1267 315 0 0 0 chr17 89483826 89483861 -5788790 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 1267 562 274 76 0 chr17 89483892 89484049 -5788602 - B4A SINE B4 -6 286 118 6 1267 1009 126 45 17 chr17 89485594 89485771 -5786880 - B2_Mm2 SINE B2 -11 184 3 6 1267 2471 65 6 10 chr17 89485786 89486098 -5786553 - L1Md_F2 LINE L1 -12 6570 6260 6 1267 513 32 0 0 chr17 89486159 89486222 -5786429 + (TG)n Simple_repeat Simple_repeat 1 63 0 6 1267 485 270 96 57 chr17 89488318 89488475 -5784176 + RSINE1 SINE B4 3 165 0 6 1267 1246 68 0 7 chr17 89488914 89489062 -5783589 + B1_Mm SINE Alu 1 147 0 6 1267 5096 125 36 5 chr17 89489901 89490642 -5782009 + Lx4A LINE L1 6055 6818 -240 6 1267 2242 110 12 9 chr17 89490642 89490963 -5781688 - ORR1A4 LTR MaLR 0 329 8 6 1267 507 108 0 0 chr17 89490964 89491038 -5781613 + Lx4A LINE L1 6814 6887 -171 6 1267 517 224 13 38 chr17 89491617 89491775 -5780876 + Lx4A LINE L1 6902 7055 -3 6 1267 1215 88 0 0 chr17 89492151 89492298 -5780353 - B1_Mus1 SINE Alu 0 148 2 6 1267 230 306 31 3 chr17 89492321 89492408 -5780243 + MIR SINE MIR 74 162 -100 6 1267 718 211 15 17 chr17 89492997 89493159 -5779492 - B3 SINE B2 -43 152 2 6 1267 276 368 94 26 chr17 89493791 89494025 -5778626 - MLT1K LTR MaLR -292 303 54 6 1267 434 289 45 70 chr17 89496227 89496428 -5776223 - MER2 DNA MER2_type -30 315 120 6 1267 429 20 0 0 chr17 89496432 89496482 -5776169 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1267 441 339 106 49 chr17 89497039 89497427 -5775224 + L2a LINE L2 1452 1861 -1558 6 1267 192 281 40 106 chr17 89497442 89497593 -5775058 + L2a LINE L2 2825 2965 -454 6 1267 789 90 0 0 chr17 89497734 89497845 -5774806 + (TTTC)n Simple_repeat Simple_repeat 2 112 0 6 1267 212 330 89 47 chr17 89497846 89498059 -5774592 + L2a LINE L2 3159 3380 -46 6 1267 32 0 0 0 chr17 89498436 89498468 -5774183 + AT_rich Low_complexity Low_complexity 1 32 0 6 1267 189 121 0 0 chr17 89498496 89498529 -5774122 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 6 1267 274 257 0 26 chr17 89498942 89499018 -5773633 + CT-rich Low_complexity Low_complexity 1 74 0 6 1267 339 113 0 0 chr17 89499296 89499358 -5773293 + (T)n Simple_repeat Simple_repeat 1 62 0 6 1267 889 73 194 0 chr17 89499358 89499482 -5773169 - B1_Mus1 SINE Alu 0 148 1 6 1267 318 228 21 11 chr17 89499496 89499589 -5773062 + L1MEe LINE L1 181 274 -4580 6 1267 288 0 0 0 chr17 89499678 89499710 -5772941 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 1267 572 321 115 28 chr17 89500288 89500541 -5772110 + MTE2b LTR MaLR 5 279 -100 1 1267 2013 186 16 24 chr17 89500546 89500648 -5772003 - ORR1C1 LTR MaLR 0 378 278 2 1267 2054 222 4 173 chr17 89500648 89501383 -5771268 + RMER19C LTR ERVK 1 611 0 3 1267 2013 186 16 24 chr17 89501383 89501661 -5770990 - ORR1C1 LTR MaLR -101 277 1 2 1267 428 231 18 53 chr17 89501661 89501767 -5770884 + MTE2b LTR MaLR 278 379 0 1 1267 23676 171 20 13 chr17 89501931 89504111 -5768540 + L1_Mus4 LINE L1 558 2745 -3138 4 1267 1935 64 4 4 chr17 89504111 89504362 -5768289 + L1_Mus2 LINE L1 6314 6564 -2 5 1267 23676 144 14 11 chr17 89504362 89508238 -5764413 + L1_Mus4 LINE L1 2746 6628 -8 4 1267 332 278 275 63 chr17 89508368 89508575 -5764076 - MER2 DNA MER2_type 0 345 95 6 1267 570 259 20 0 chr17 89508661 89508808 -5763843 + Tigger5 DNA MER2_type 2172 2321 -85 7 1267 25 0 0 0 chr17 89508900 89508925 -5763726 + AT_rich Low_complexity Low_complexity 1 25 0 8 1267 843 256 15 0 chr17 89509123 89509322 -5763329 + B3 SINE B2 1 202 -14 9 1267 335 229 7 0 chr17 89509816 89509960 -5762691 + (CA)n Simple_repeat Simple_repeat 2 146 0 1 1267 458 229 19 7 chr17 89509961 89510115 -5762536 + CT-rich Low_complexity Low_complexity 1 156 0 1 1267 243 0 0 0 chr17 89510231 89510258 -5762393 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1267 1039 103 0 0 chr17 89510258 89510394 -5762257 - B1_Mm SINE Alu -10 137 2 1 1267 1324 33 22 16 chr17 89510451 89510636 -5762015 - L1Md_F3 LINE L1 0 6584 6399 1 1267 301 288 37 29 chr17 89511113 89511249 -5761402 - Lx6 LINE L1 -16 7444 7308 1 1267 403 300 30 37 chr17 89511472 89511607 -5761044 + MER74A LTR ERVL 424 557 -1 1 1267 259 280 83 71 chr17 89512162 89512331 -5760320 - MER121 Unknown Unknown -143 269 99 1 1267 900 66 14 7 chr17 89512690 89512828 -5759823 + (TAGA)n Simple_repeat Simple_repeat 3 141 0 1 1267 518 323 63 46 chr17 89512860 89513141 -5759510 - B4 SINE B4 -11 281 6 1 1267 30 0 0 0 chr17 89514086 89514116 -5758535 + AT_rich Low_complexity Low_complexity 1 30 0 2 1267 596 260 16 0 chr17 89514171 89514298 -5758353 - B1_Mur2 SINE Alu -20 129 1 2 1267 2123 128 21 37 chr17 89514498 89514872 -5757779 + RLTR9A LTR ERVK 1 368 0 2 1267 530 309 24 0 chr17 89516170 89516338 -5756313 + MER102b DNA MER1_type 19 190 -151 2 1267 278 344 130 31 chr17 89516505 89516667 -5755984 - MER5B DNA MER1_type 0 178 1 2 1267 213 315 10 110 chr17 89517107 89517207 -5755444 - L2a LINE L2 -40 3386 3297 2 1267 202 211 0 0 chr17 89517324 89517362 -5755289 + (CATA)n Simple_repeat Simple_repeat 2 39 0 2 1267 24 0 0 0 chr17 89517398 89517422 -5755229 + AT_rich Low_complexity Low_complexity 1 24 0 2 1267 319 353 63 24 chr17 89517547 89517753 -5754898 - MIRb SINE MIR -19 249 36 2 1267 438 298 0 76 chr17 89518017 89518188 -5754463 - RSINE1 SINE B4 -6 159 2 2 1267 633 236 8 0 chr17 89519180 89519307 -5753344 - B1_Mur1 SINE Alu -19 130 3 3 1267 267 31 0 0 chr17 89519952 89519984 -5752667 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1267 795 208 106 45 chr17 89519986 89520278 -5752373 + RLTR15 LTR ERVK 33 342 -17 3 1267 267 314 92 10 chr17 89520291 89520497 -5752154 - L1ME1 LINE L1 -91 6088 5866 3 1267 26 0 0 0 chr17 89520502 89520528 -5752123 + AT_rich Low_complexity Low_complexity 1 26 0 3 1267 357 298 109 4 chr17 89520628 89520867 -5751784 - L1ME1 LINE L1 -364 5815 5552 3 1267 477 277 59 59 chr17 89521153 89521322 -5751329 - B3 SINE B2 -11 205 37 3 1267 1187 101 3 0 chr17 89521329 89521687 -5750964 + (TTC)n Simple_repeat Simple_repeat 1 359 0 3 158 6860 109 18 1 chr17 89521691 89523221 -5749430 - L1_Mus3 LINE L1 -10 6628 5073 3 1268 309 305 113 30 chr17 89523414 89523617 -5749034 - L1MEf LINE L1 -1439 4707 4488 3 1268 25 0 0 0 chr17 89524248 89524273 -5748378 + AT_rich Low_complexity Low_complexity 1 25 0 3 1268 34 24 0 0 chr17 89525334 89525375 -5747276 + AT_rich Low_complexity Low_complexity 1 41 0 4 1268 288 183 4 2 chr17 89525907 89525979 -5746672 - L1MEf LINE L1 -2444 3702 3630 3 1268 366 312 88 19 chr17 89526116 89526340 -5746311 - L1MEf LINE L1 -3689 2457 2214 3 1268 753 281 81 16 chr17 89526425 89526870 -5745781 - L1MEf LINE L1 -4163 2079 1606 3 1268 229 309 129 8 chr17 89526899 89527023 -5745628 - B1F1 SINE Alu -6 143 5 4 1268 230 276 13 0 chr17 89527065 89527141 -5745510 + L1M4 LINE L1 2936 3012 -3134 4 1268 704 336 19 5 chr17 89527143 89527352 -5745299 + ID_B1 SINE B4 4 215 -9 4 1268 652 275 79 47 chr17 89527385 89527725 -5744926 - RLTR15 LTR ERVK -8 351 1 4 1268 13143 176 48 22 chr17 89528083 89531385 -5741266 + L1_Mur3 LINE L1 892 4276 -1601 4 1268 526 286 94 36 chr17 89531467 89531659 -5740992 - ID_B1 SINE B4 -20 204 2 4 1268 383 217 0 0 chr17 89531811 89531871 -5740780 - RMER30 DNA MER1_type -6 196 137 4 1268 288 347 28 0 chr17 89531812 89531884 -5740767 + Charlie12 DNA MER1_type 7 80 -2793 4 1268 257 236 120 116 chr17 89532078 89532294 -5740357 - L1M4 LINE L1 -2603 3543 3327 4 1268 219 296 8 31 chr17 89532379 89532508 -5740143 + T-rich Low_complexity Low_complexity 2 127 0 5 1268 639 216 11 28 chr17 89533064 89533245 -5739406 + L1VL1 LINE L1 122 299 -6123 5 1268 31519 45 1 0 chr17 89533279 89537406 -5735245 + L1Md_F3 LINE L1 1456 5584 -299 5 1268 7794 54 9 0 chr17 89537408 89538383 -5734268 + L1Md_F3 LINE L1 5587 6570 -14 5 1268 961 312 47 11 chr17 89538686 89539046 -5733605 + Lx8 LINE L1 6927 7299 -174 5 1268 24 0 0 0 chr17 89539190 89539214 -5733437 + AT_rich Low_complexity Low_complexity 1 24 0 5 1268 576 350 69 20 chr17 89539226 89539430 -5733221 + B4A SINE B4 4 217 -75 5 1268 205 143 20 20 chr17 89539441 89539491 -5733160 + (CAAA)n Simple_repeat Simple_repeat 4 53 0 5 1268 822 109 0 0 chr17 89539509 89539637 -5733014 + (CAAAG)n Simple_repeat Simple_repeat 2 129 0 5 1268 506 339 78 70 chr17 89539840 89540252 -5732399 + MER47B DNA MER2_type 1 415 -3 5 1268 259 193 24 0 chr17 89540416 89540499 -5732152 + GA-rich Low_complexity Low_complexity 2 86 0 5 1268 601 329 89 52 chr17 89540972 89541341 -5731310 + MLT1B LTR MaLR 6 388 -2 6 1268 1094 60 0 0 chr17 89541600 89541734 -5730917 + B1_Mus1 SINE Alu 2 135 -13 6 1268 360 0 0 0 chr17 89541734 89541774 -5730877 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 6 1268 207 139 0 0 chr17 89543017 89543053 -5729598 + (TTTTC)n Simple_repeat Simple_repeat 4 39 0 6 1268 22 0 0 0 chr17 89543092 89543114 -5729537 + AT_rich Low_complexity Low_complexity 1 22 0 6 1268 322 231 52 61 chr17 89543123 89543238 -5729413 - HAL1-3A_ME LINE L1 -769 2089 1976 6 1268 229 231 39 0 chr17 89543238 89543290 -5729361 + (CGTG)n Simple_repeat Simple_repeat 2 55 0 6 1268 450 226 9 0 chr17 89543290 89543396 -5729255 + RMER1C Other Other 1236 1342 0 6 1268 495 0 0 0 chr17 89543694 89543749 -5728902 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1268 1284 209 20 0 chr17 89543829 89544073 -5728578 + Lx5 LINE L1 6795 7043 -7 6 1268 397 390 15 38 chr17 89545959 89546220 -5726431 - MIRb SINE MIR 0 268 14 7 1268 495 257 70 105 chr17 89546310 89546510 -5726141 + MLT2B1 LTR ERVL 60 252 -268 7 1268 210 98 59 0 chr17 89546677 89546728 -5725923 + (TCTA)n Simple_repeat Simple_repeat 2 55 0 7 1268 243 255 0 0 chr17 89546775 89546822 -5725829 + MLT2B1 LTR ERVL 506 552 -2 7 1268 37694 35 5 6 chr17 89546977 89553744 -5718907 - L1Md_T LINE L1 0 6582 1 7 1268 264 122 0 0 chr17 89553929 89553970 -5718681 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1268 308 333 134 5 chr17 89554629 89554831 -5717820 - MIR SINE MIR -34 228 1 7 1268 225 65 0 0 chr17 89555454 89555485 -5717166 + (ATG)n Simple_repeat Simple_repeat 2 32 0 7 1268 460 288 0 48 chr17 89555498 89555644 -5717007 - B1_Mur1 SINE Alu -10 139 1 7 1268 200 391 74 12 chr17 89556446 89556609 -5716042 - MIRc SINE MIR -5 263 91 7 1268 234 189 38 0 chr17 89556871 89556924 -5715727 + L1MC5 LINE L1 7729 7783 -178 7 1268 2209 197 84 108 chr17 89558429 89559049 -5713602 + RLTR13C1 LTR ERVK 1 605 -378 8 1268 427 232 29 48 chr17 89559046 89559150 -5713501 + RLTR13C1 LTR ERVK 922 1023 0 8 1268 351 0 0 0 chr17 89559575 89559614 -5713037 + (CA)n Simple_repeat Simple_repeat 1 39 0 8 1268 195 42 0 0 chr17 89560162 89560186 -5712465 + (TTA)n Simple_repeat Simple_repeat 2 25 0 8 1268 204 333 25 13 chr17 89560872 89560951 -5711700 - L2c LINE L2 -30 3357 3278 8 1268 209 278 83 0 chr17 89561461 89561533 -5711118 + MIR SINE MIR 112 189 -73 8 1268 216 353 29 14 chr17 89561578 89561647 -5711004 + B4A SINE B4 54 123 -169 8 1268 463 306 25 31 chr17 89561665 89561827 -5710824 - RSINE1 SINE B4 -1 164 4 8 1268 705 106 0 0 chr17 89562182 89562286 -5710365 + (GAGAA)n Simple_repeat Simple_repeat 2 105 0 8 1268 3993 34 0 0 chr17 89562416 89562861 -5709790 - L1Md_A LINE L1 -1 6581 6137 8 1268 190 296 231 0 chr17 89565793 89565901 -5706750 + MIRc SINE MIR 95 227 -41 8 1268 740 11 11 0 chr17 89567259 89567348 -5705303 + (TTTC)n Simple_repeat Simple_repeat 3 92 0 9 1268 312 341 22 77 chr17 89567408 89567589 -5705062 + B4 SINE B4 2 172 -120 9 1268 291 369 80 21 chr17 89568261 89568549 -5704102 + L2a LINE L2 2463 2767 -652 9 1268 221 155 0 17 chr17 89568559 89568586 -5704065 + T-rich Low_complexity Low_complexity 33 59 0 9 1268 393 22 0 0 chr17 89568586 89568632 -5704019 + (TGG)n Simple_repeat Simple_repeat 1 46 0 9 1268 221 155 0 17 chr17 89568632 89568663 -5703988 + T-rich Low_complexity Low_complexity 2 32 0 9 1268 1271 68 0 0 chr17 89568667 89568814 -5703837 - B1_Mus2 SINE Alu 0 147 1 9 1268 5233 142 31 1 chr17 89568818 89569600 -5703051 - Lx2A1 LINE L1 -3 7005 6201 9 1268 568 288 20 7 chr17 89569606 89569753 -5702898 - B1F SINE Alu 0 149 1 9 1268 265 337 133 28 chr17 89569894 89570193 -5702458 + L2a LINE L2 2836 3163 -263 9 1268 189 0 0 0 chr17 89570366 89570387 -5702264 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 9 1268 365 301 34 34 chr17 89572079 89572227 -5700424 + Lx9 LINE L1 5829 5976 -1668 1 1268 274 285 102 90 chr17 89572618 89572784 -5699867 - B2_Mm2 SINE B2 -27 168 1 1 1268 2212 323 125 16 chr17 89572807 89573784 -5698867 + Lx8 LINE L1 6200 7282 -191 1 1268 433 114 48 0 chr17 89573815 89573920 -5698731 + (TAGA)n Simple_repeat Simple_repeat 4 113 0 1 1268 273 236 54 45 chr17 89573936 89574047 -5698604 + Lx8 LINE L1 7360 7471 -2 1 1268 7577 68 1 16 chr17 89574112 89575166 -5697485 + L1_Mus2 LINE L1 5529 6566 0 1 1268 775 0 21 0 chr17 89576317 89576412 -5696239 + (TCTA)n Simple_repeat Simple_repeat 2 98 0 1 1268 329 203 38 30 chr17 89576436 89576568 -5696083 + (TTATA)n Simple_repeat Simple_repeat 1 133 0 1 1268 21 36 0 0 chr17 89576884 89576912 -5695739 + AT_rich Low_complexity Low_complexity 1 28 0 1 1268 238 331 79 0 chr17 89577012 89577151 -5695500 + MIR SINE MIR 97 246 -16 1 1268 885 250 228 23 chr17 89577327 89577630 -5695021 - ORR1D2 LTR MaLR -5 365 1 1 1268 855 193 44 22 chr17 89578447 89578627 -5694024 - B2_Mm2 SINE B2 -11 184 1 1 1268 453 358 28 6 chr17 89578656 89578833 -5693818 - B3A SINE B2 -16 182 2 1 1268 3586 64 0 0 chr17 89579023 89579478 -5693173 - L1_Mus2 LINE L1 -497 6069 5615 1 1268 838 60 22 8 chr17 89579478 89579612 -5693039 + L1_Mus3 LINE L1 6503 6638 0 1 1268 27 62 0 0 chr17 89580160 89580208 -5692443 + AT_rich Low_complexity Low_complexity 1 48 0 1 1268 2206 236 2 16 chr17 89580472 89580908 -5691743 - Lx6 LINE L1 -855 6605 6176 1 1268 3798 229 61 11 chr17 89580908 89581726 -5690925 + Lx6 LINE L1 6602 7460 0 1 1268 513 104 0 0 chr17 89581991 89582068 -5690583 + (TA)n Simple_repeat Simple_repeat 2 78 0 1 1268 5477 53 3 2 chr17 89582587 89583227 -5689424 + L1_Mus1 LINE L1 5927 6567 0 1 1268 282 274 55 0 chr17 89583714 89583787 -5688864 + L1M4b LINE L1 1005 1081 -6253 1 1268 368 302 135 0 chr17 89584451 89584577 -5688074 + B1F SINE Alu 2 144 -5 1 1268 587 26 13 0 chr17 89585190 89585267 -5687384 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 1 1268 621 72 0 0 chr17 89585274 89585357 -5687294 + (TA)n Simple_repeat Simple_repeat 1 83 0 1 1268 1050 254 77 29 chr17 89585372 89585749 -5686902 - L1MA4 LINE L1 -371 5929 5535 1 1268 373 264 12 58 chr17 89586250 89586336 -5686315 + B4A SINE B4 5 87 -78 1 1268 1318 188 9 0 chr17 89586585 89586809 -5685842 + URR1A DNA MER1_type 1 226 0 1 1268 238 335 153 31 chr17 89587384 89587710 -5684941 - L2 LINE L2 -924 2495 2130 1 1268 682 215 30 0 chr17 89588453 89588588 -5684063 + B1_Mur1 SINE Alu 2 140 -9 1 1268 396 59 0 0 chr17 89588600 89588651 -5684000 + (TAAA)n Simple_repeat Simple_repeat 4 54 0 1 1268 468 0 0 0 chr17 89588754 89588806 -5683845 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 1268 252 323 16 0 chr17 89588807 89588869 -5683782 - ID2 SINE ID -10 73 11 1 1268 513 0 0 0 chr17 89588917 89588974 -5683677 + (CAAAC)n Simple_repeat Simple_repeat 3 59 0 1 1268 273 337 84 6 chr17 89589158 89589325 -5683326 + HAL1 LINE L1 578 757 -1750 1 1268 264 137 0 0 chr17 89590045 89590096 -5682555 + (CTG)n Simple_repeat Simple_repeat 1 51 0 1 1268 237 211 0 0 chr17 89590096 89590148 -5682503 + (TGG)n Simple_repeat Simple_repeat 3 54 0 1 1268 202 195 0 0 chr17 89590122 89590163 -5682488 + (CTG)n Simple_repeat Simple_repeat 3 43 0 1 1268 507 211 0 0 chr17 89590163 89590329 -5682322 + (TGG)n Simple_repeat Simple_repeat 1 166 0 1 1268 225 207 0 0 chr17 89590346 89590428 -5682223 + (TGG)n Simple_repeat Simple_repeat 1 82 0 1 1268 480 35 0 0 chr17 89592405 89592463 -5680188 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 1268 11045 106 17 2 chr17 89592625 89594998 -5677653 + L1_Mus3 LINE L1 4236 6638 0 1 1268 22 0 0 0 chr17 89595572 89595594 -5677057 + AT_rich Low_complexity Low_complexity 1 22 0 1 1268 590 85 11 0 chr17 89596052 89596146 -5676505 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 1 1268 6773 145 15 28 chr17 89596291 89597394 -5675257 + Lx2 LINE L1 5909 6997 0 1 1268 381 136 0 0 chr17 89597776 89597842 -5674809 + (CA)n Simple_repeat Simple_repeat 2 67 0 1 1268 239 238 0 45 chr17 89598285 89598351 -5674300 + CT-rich Low_complexity Low_complexity 3 65 0 1 1268 3785 186 90 36 chr17 89601011 89601869 -5670782 - RMER13B LTR ERVK -4 904 1 1 1268 2060 212 10 53 chr17 89602021 89602549 -5670102 + Lx2B LINE L1 6148 6997 -3 1 1268 1004 147 0 17 chr17 89602549 89602722 -5669929 - L1_Mur3 LINE L1 -1690 4190 4021 1 1268 778 215 26 26 chr17 89602692 89602926 -5669725 - L1_Mur3 LINE L1 -4288 1592 1359 1 1268 3506 261 28 49 chr17 89602924 89604365 -5668286 - L1_Mur3 LINE L1 -3622 2258 844 1 1268 294 162 174 51 chr17 89605574 89605680 -5666971 - B2_Mm2 SINE B2 -9 186 47 1 1268 1355 96 11 0 chr17 89605713 89605890 -5666761 - B2_Mm1t SINE B2 -14 179 1 1 1268 23 0 0 0 chr17 89605901 89605924 -5666727 + AT_rich Low_complexity Low_complexity 1 23 0 1 1268 945 73 0 0 chr17 89606595 89606718 -5665933 - B1_Mus1 SINE Alu 0 148 26 1 1268 264 146 19 37 chr17 89606808 89606915 -5665736 + (TTATA)n Simple_repeat Simple_repeat 5 109 0 1 1268 602 279 51 33 chr17 89607484 89607699 -5664952 - ID_B1 SINE B4 -2 222 4 1 1268 241 219 343 28 chr17 89607710 89607721 -5664930 - B1F SINE Alu -1 148 7 1 1268 283 278 268 0 chr17 89607721 89607818 -5664833 - ID_B1 SINE B4 -14 210 88 1 1268 494 226 92 42 chr17 89608031 89608151 -5664500 - B1_Mur2 SINE Alu -19 130 5 1 1268 277 308 16 70 chr17 89608780 89608822 -5663829 + B4 SINE B4 46 80 -212 1 1268 400 193 0 67 chr17 89608822 89608911 -5663740 + B1_Mus1 SINE Alu 1 83 -65 1 1268 1170 72 0 0 chr17 89610817 89610956 -5661695 + B1_Mus1 SINE Alu 1 139 -9 1 1268 264 253 124 21 chr17 89611309 89611406 -5661245 - PB1D10 SINE Alu -9 108 2 1 1268 1101 57 0 0 chr17 89611429 89611570 -5661081 + B1_Mus1 SINE Alu 8 148 0 1 1268 195 129 0 0 chr17 89611748 89611779 -5660872 + (CAA)n Simple_repeat Simple_repeat 2 32 0 1 1268 485 342 46 3 chr17 89611799 89612101 -5660550 - Lx7 LINE L1 -410 7286 6972 1 1268 829 292 19 15 chr17 89612094 89612355 -5660296 + Lx7 LINE L1 6698 6959 -737 1 1268 612 351 122 40 chr17 89613044 89613546 -5659105 + MLT2E LTR ERVL 27 569 -59 1 1268 291 114 0 0 chr17 89613866 89613910 -5658741 + (CAAG)n Simple_repeat Simple_repeat 4 47 0 1 1268 294 274 65 19 chr17 89614883 89614991 -5657660 - MLT-int LTR MaLR -172 1563 1451 1 1268 444 348 152 57 chr17 89615211 89615598 -5657053 - MLT-int LTR MaLR -617 1118 695 1 1268 21 0 0 0 chr17 89615606 89615627 -5657024 + AT_rich Low_complexity Low_complexity 1 21 0 1 1268 243 0 0 0 chr17 89616183 89616210 -5656441 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 1268 468 0 0 0 chr17 89616211 89616263 -5656388 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1268 603 108 0 0 chr17 89617073 89617166 -5655485 + (CA)n Simple_repeat Simple_repeat 2 94 0 1 1268 618 14 0 0 chr17 89617820 89617891 -5654760 + (CA)n Simple_repeat Simple_repeat 1 71 0 1 1268 341 273 0 0 chr17 89618432 89618509 -5654142 + PB1D10 SINE Alu 33 109 -8 1 1268 210 318 0 0 chr17 89620275 89620341 -5652310 + (CAT)n Simple_repeat Simple_repeat 1 66 0 1 1268 683 217 7 7 chr17 89620511 89620664 -5651987 + Lx9 LINE L1 6840 6992 -652 1 1268 730 138 0 70 chr17 89620664 89620820 -5651831 - L1Md_F3 LINE L1 -1 6583 6439 1 1268 3855 53 40 0 chr17 89622492 89623016 -5649635 + L1Md_F2 LINE L1 5042 5586 -297 1 1268 7531 64 20 4 chr17 89623016 89623985 -5648666 + L1Md_F2 LINE L1 5587 6570 -12 1 1268 722 160 0 45 chr17 89624423 89624580 -5648071 - L1Md_A LINE L1 0 6582 6433 1 1268 3123 69 7 0 chr17 89624580 89625003 -5647648 - L1_Mus1 LINE L1 -265 6302 5877 1 1268 607 316 67 19 chr17 89625115 89625486 -5647165 + L1MA4A LINE L1 5492 5880 -423 1 1268 480 48 0 0 chr17 89625828 89625891 -5646760 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 1268 25 75 0 0 chr17 89625943 89625996 -5646655 + AT_rich Low_complexity Low_complexity 1 53 0 1 1268 334 352 73 36 chr17 89626035 89626309 -5646342 - L1ME3B LINE L1 -173 6067 5784 1 1268 567 262 95 40 chr17 89626412 89626686 -5645965 + MER33 DNA MER1_type 15 303 -21 1 1268 4026 85 27 0 chr17 89626800 89627362 -5645289 - L1_Mus1 LINE L1 0 6567 5991 1 1268 274 302 144 39 chr17 89627642 89627997 -5644654 - L1ME3B LINE L1 -946 5200 4809 1 1268 426 252 75 28 chr17 89628110 89628216 -5644435 + RSINE1 SINE B4 2 112 -53 1 1268 513 58 0 0 chr17 89628286 89628355 -5644296 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 1268 376 344 111 33 chr17 89628557 89629287 -5643364 - L1ME3B LINE L1 -1643 4503 3717 1 1268 252 344 62 10 chr17 89629404 89629501 -5643150 - PB1D10 SINE Alu 0 117 16 1 1268 802 281 34 29 chr17 89629688 89629761 -5642890 + ID SINE ID 8 81 -143 1 1268 370 277 81 81 chr17 89629761 89629910 -5642741 + B1F1 SINE Alu 1 149 0 1 1268 2115 177 79 42 chr17 89629951 89630457 -5642194 + RLTR11A2 LTR ERVK 3 527 0 1 1268 202 282 0 0 chr17 89630469 89630540 -5642111 + A-rich Low_complexity Low_complexity 1 71 0 1 1268 447 19 0 0 chr17 89630747 89630799 -5641852 + (TATG)n Simple_repeat Simple_repeat 2 53 0 1 1268 13867 173 150 9 chr17 89631798 89636902 -5635749 - Lx3B LINE L1 -3 6970 1086 1 1268 4099 88 0 7 chr17 89636902 89637465 -5635186 + L1Md_F2 LINE L1 6009 6567 -15 1 1268 4224 189 28 31 chr17 89637465 89638200 -5634451 - Lx3B LINE L1 -5899 1085 37 1 1268 192 200 0 0 chr17 89638282 89638342 -5634309 + T-rich Low_complexity Low_complexity 1 60 0 1 1268 3568 10 0 0 chr17 89638425 89638824 -5633827 - L1Md_A LINE L1 0 6582 6184 1 1268 279 0 0 0 chr17 89639509 89639540 -5633111 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 1268 342 0 0 0 chr17 89639541 89639579 -5633072 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1268 384 247 0 0 chr17 89640718 89640795 -5631856 + ID4 SINE ID 5 81 -2 1 1268 238 306 108 0 chr17 89642617 89642774 -5629877 + L1MD3 LINE L1 7011 7184 -698 1 1268 342 342 95 33 chr17 89643523 89643922 -5628729 + L1MD3 LINE L1 7177 7600 -395 1 1268 363 160 0 0 chr17 89643945 89644039 -5628612 + T-rich Low_complexity Low_complexity 1 94 0 2 1268 229 284 79 51 chr17 89644129 89644344 -5628307 + L1MD3 LINE L1 7759 7979 -16 1 1268 285 151 0 0 chr17 89644601 89644654 -5627997 + CT-rich Low_complexity Low_complexity 2 54 0 2 1268 217 211 107 53 chr17 89644656 89644731 -5627920 + L2a LINE L2 3332 3410 -16 2 1268 356 253 61 31 chr17 89645369 89645467 -5627184 + PB1D7 SINE Alu 1 101 -19 2 1268 300 312 27 27 chr17 89646883 89646995 -5625656 + ORR1E LTR MaLR 1 112 -247 2 1268 259 281 61 30 chr17 89647135 89647234 -5625417 + ORR1E LTR MaLR 278 379 0 2 1268 3713 64 2 0 chr17 89647316 89647803 -5624848 + L1_Mus1 LINE L1 5852 6339 -228 2 1268 503 344 40 97 chr17 89647977 89648096 -5624555 - B4A SINE B4 -18 274 160 2 1268 3339 147 51 98 chr17 89648096 89648437 -5624214 - RMER17A LTR ERVK -3 748 409 2 1268 545 0 0 15 chr17 89648437 89648503 -5624148 + (GAGAA)n Simple_repeat Simple_repeat 5 69 0 2 1268 354 100 0 0 chr17 89648505 89648565 -5624086 + (CAGAGA)n Simple_repeat Simple_repeat 1 60 0 2 1268 3339 147 51 98 chr17 89648565 89649005 -5623646 - RMER17A LTR ERVK -343 408 1 2 1268 503 344 40 97 chr17 89649005 89649133 -5623518 - B4A SINE B4 -133 159 44 2 1268 836 234 110 63 chr17 89650741 89651151 -5621500 - RMER20B LTR ERVK -40 587 96 2 1268 252 328 32 8 chr17 89651743 89651869 -5620782 + L1MC2 LINE L1 6050 6178 -166 2 1268 4349 105 27 1 chr17 89651863 89652524 -5620127 - Lx LINE L1 -282 6372 5695 2 1269 393 360 67 64 chr17 89653903 89654170 -5618481 - B4 SINE B4 -20 272 5 2 1269 353 117 0 16 chr17 89654196 89654257 -5618394 + (TCTCCC)n Simple_repeat Simple_repeat 5 64 0 2 1269 299 365 34 62 chr17 89654596 89654774 -5617877 - MLT1F2 LTR MaLR -387 173 1 2 1269 225 83 0 0 chr17 89656216 89656252 -5616399 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 2 1269 267 246 0 0 chr17 89656389 89656450 -5616201 + Tigger15a DNA TcMar 477 537 -178 2 1269 3586 51 5 2 chr17 89656739 89657174 -5615477 + RLTR10C LTR ERVK 1 436 0 2 1269 66089 5 0 0 chr17 89657174 89664755 -5607896 + MMERVK10C-int LTR ERVK 1 7581 0 2 1269 3572 53 5 2 chr17 89664755 89665190 -5607461 + RLTR10C LTR ERVK 1 436 0 2 1269 6092 68 15 0 chr17 89665329 89666111 -5606540 + L1_Mus2 LINE L1 5771 6564 -2 2 1269 464 288 324 28 chr17 89666340 89666629 -5606022 - MLT1A LTR MaLR 0 374 1 2 1269 191 32 0 61 chr17 89666843 89666876 -5605775 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 2 1269 180 281 14 86 chr17 89667367 89667437 -5605214 - MIRb SINE MIR -46 222 158 2 1269 1876 210 119 65 chr17 89667850 89668028 -5604623 - RLTR12A LTR ERVK 0 568 417 2 1269 638 127 24 8 chr17 89668028 89668155 -5604496 - Lx2A LINE L1 0 7008 6880 2 1269 1876 210 119 65 chr17 89668155 89668515 -5604136 - RLTR12A LTR ERVK -152 416 1 2 1269 1155 192 63 37 chr17 89668953 89669223 -5603428 + RLTR15 LTR ERVK 1 277 -82 2 1269 2322 108 184 0 chr17 89669318 89669743 -5602908 + RLTR47_MM LTR ERV1 21 523 -9 2 1269 1139 191 34 26 chr17 89669921 89670185 -5602466 + MYSERV-int LTR ERVK 6087 6352 -198 2 1269 657 245 5 42 chr17 89670267 89670383 -5602268 + MYSERV-int LTR ERVK 6346 6459 -91 2 1269 4134 56 59 13 chr17 89670383 89670922 -5601729 - LTRIS2 LTR ERV1 0 564 1 2 1269 657 245 5 42 chr17 89670922 89671018 -5601633 + MYSERV-int LTR ERVK 6460 6550 0 2 1269 3804 188 168 16 chr17 89671145 89672032 -5600619 + RLTR25B LTR ERVK 7 1028 0 2 1269 664 197 92 0 chr17 89672059 89672201 -5600450 + RLTR11A2 LTR ERVK 344 498 -29 2 1269 296 294 129 22 chr17 89672475 89672614 -5600037 + RMER15 LTR ERVL 422 575 0 2 1269 1508 196 79 26 chr17 89672861 89673215 -5599436 - RLTR41 LTR ERV1 0 446 18 2 1269 1866 250 8 8 chr17 89674333 89674720 -5597931 + MTC LTR MaLR 1 387 -34 2 1269 823 294 13 4 chr17 89674778 89675010 -5597641 - Lx9 LINE L1 -877 6767 6534 2 1269 211 184 0 39 chr17 89675487 89675538 -5597113 + A-rich Low_complexity Low_complexity 4 52 0 2 1269 698 149 0 30 chr17 89675540 89675706 -5596945 + GA-rich Low_complexity Low_complexity 3 163 0 2 1269 1540 0 0 12 chr17 89675730 89675973 -5596678 + (GAA)n Simple_repeat Simple_repeat 1 239 0 2 1269 24 53 0 0 chr17 89676770 89676808 -5595843 + AT_rich Low_complexity Low_complexity 1 38 0 2 1269 21 0 0 0 chr17 89677398 89677419 -5595232 + AT_rich Low_complexity Low_complexity 1 21 0 2 1269 23 0 0 0 chr17 89677641 89677664 -5594987 + AT_rich Low_complexity Low_complexity 1 23 0 2 1269 22 0 0 0 chr17 89677963 89677985 -5594666 + AT_rich Low_complexity Low_complexity 1 22 0 2 1269 227 309 0 42 chr17 89678866 89678937 -5593714 - ID4_ SINE ID -13 70 3 2 1269 2008 166 68 16 chr17 89679427 89679794 -5592857 - ORR1B1 LTR MaLR -8 386 1 2 1269 2504 240 76 102 chr17 89679794 89681367 -5591284 - ORR1B1-int LTR MaLR -192 1600 430 2 1269 432 0 0 0 chr17 89681367 89681415 -5591236 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1269 2504 183 46 112 chr17 89681415 89681808 -5590843 - ORR1B1-int LTR MaLR -1534 429 17 2 1269 1312 208 20 163 chr17 89681808 89682268 -5590383 - ORR1B1 LTR MaLR 0 394 1 2 1269 488 167 0 10 chr17 89682414 89682511 -5590140 + (TA)n Simple_repeat Simple_repeat 2 97 0 2 1269 385 277 32 0 chr17 89682991 89683085 -5589566 - PB1D10 SINE Alu -7 110 14 2 1269 188 311 0 16 chr17 89683581 89683643 -5589008 + L2a LINE L2 3339 3399 -27 2 1269 294 272 96 0 chr17 89683887 89684019 -5588632 - MIR SINE MIR -50 158 4 2 1269 306 0 0 0 chr17 89685079 89685113 -5587538 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 1269 390 272 119 50 chr17 89685166 89685214 -5587437 + MIRb SINE MIR 2 54 -214 2 1269 1048 236 106 21 chr17 89685214 89685600 -5587051 - MTD LTR MaLR 0 419 1 2 1269 390 286 93 46 chr17 89685600 89685771 -5586880 + MIRb SINE MIR 55 239 -29 2 1269 1572 223 85 18 chr17 89686341 89686811 -5585840 - RMER15 LTR ERVL -11 564 1 2 1269 27 49 0 0 chr17 89687446 89687487 -5585164 + AT_rich Low_complexity Low_complexity 1 41 0 2 1269 528 111 0 0 chr17 89689441 89689522 -5583129 + (TG)n Simple_repeat Simple_repeat 1 81 0 2 1269 387 263 131 0 chr17 89689536 89689635 -5583016 - RSINE1 SINE B4 -35 130 19 2 1269 1242 176 18 0 chr17 89689637 89689858 -5582793 + URR1B DNA MER1_type 1 225 0 2 1269 313 333 17 17 chr17 89689986 89690102 -5582549 + MLT1H2 LTR MaLR 7 122 -367 2 1269 1713 54 0 26 chr17 89691812 89692042 -5580609 - L1Md_F3 LINE L1 -15 6569 6346 2 1269 5331 92 48 3 chr17 89692145 89692903 -5579748 + Lx3_Mus LINE L1 6218 7009 0 2 1269 441 0 0 0 chr17 89693596 89693645 -5579006 + (TTTTG)n Simple_repeat Simple_repeat 5 53 0 2 1269 257 232 24 24 chr17 89694490 89694574 -5578077 + (TATATG)n Simple_repeat Simple_repeat 6 89 0 2 1269 2177 304 63 35 chr17 89694596 89695633 -5577018 + Lx9 LINE L1 6383 7448 -196 2 1269 180 0 0 0 chr17 89695683 89695703 -5576948 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 1269 430 250 0 22 chr17 89696085 89696175 -5576476 + B3 SINE B2 3 90 -126 2 1269 364 67 33 0 chr17 89697401 89697461 -5575190 + (TTCA)n Simple_repeat Simple_repeat 2 63 0 2 1269 603 216 40 0 chr17 89699429 89699554 -5573097 + B1_Mur1 SINE Alu 5 134 -15 2 1269 209 298 42 0 chr17 89700470 89700555 -5572096 + MIR SINE MIR 79 174 -94 2 1269 261 275 76 11 chr17 89700905 89700997 -5571654 + MIR SINE MIR 165 262 0 2 1269 378 0 0 0 chr17 89702678 89702720 -5569931 + (T)n Simple_repeat Simple_repeat 1 42 0 2 1269 23 54 0 0 chr17 89703170 89703207 -5569444 + AT_rich Low_complexity Low_complexity 1 37 0 2 1269 1359 55 0 0 chr17 89704145 89704383 -5568268 + (CA)n Simple_repeat Simple_repeat 1 238 0 2 1269 293 246 209 36 chr17 89706208 89706347 -5566304 + MER2 DNA MER2_type 1 163 -182 2 1269 355 239 32 11 chr17 89706551 89706644 -5566007 + Charlie9 DNA MER1_type 8 102 -2655 2 1269 23 33 0 0 chr17 89706867 89706897 -5565754 + AT_rich Low_complexity Low_complexity 1 30 0 2 1269 580 293 63 27 chr17 89708411 89708632 -5564019 + ORR1E LTR MaLR 23 251 -108 2 1269 3064 73 8 0 chr17 89709087 89709484 -5563167 - MTB LTR MaLR 0 400 1 2 1269 298 326 36 158 chr17 89709688 89709819 -5562832 - MTB-int LTR MaLR -27 1553 1431 2 1269 1153 62 0 0 chr17 89709819 89709963 -5562688 - B1_Mm SINE Alu -1 146 3 2 1269 2738 61 6 14 chr17 89709964 89710327 -5562324 + L1_Mus1 LINE L1 6207 6566 -1 2 1269 308 386 278 51 chr17 89710327 89710638 -5562013 - MTB-int LTR MaLR -150 1430 1055 2 1269 278 236 53 40 chr17 89710750 89710825 -5561826 + ORR1E LTR MaLR 288 363 -16 2 1269 399 346 38 108 chr17 89710822 89710996 -5561655 - MTE-int LTR MaLR -1299 281 109 2 1269 700 87 31 23 chr17 89710996 89711126 -5561525 + L1Md_F2 LINE L1 6451 6581 -1 2 1269 399 346 38 108 chr17 89711126 89711191 -5561460 - MTE-int LTR MaLR -1472 108 59 2 1269 473 313 23 158 chr17 89712478 89712907 -5559744 + MTEa LTR MaLR 1 371 -8 2 1269 788 160 291 0 chr17 89715452 89715627 -5557024 + URR1A DNA MER1_type 1 226 0 2 1269 524 222 29 29 chr17 89715801 89715940 -5556711 + MLT2B1 LTR ERVL 6 144 -376 2 1269 261 0 0 0 chr17 89716853 89716882 -5555769 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 2 1269 24 0 0 0 chr17 89716971 89716995 -5555656 + AT_rich Low_complexity Low_complexity 1 24 0 2 1269 187 167 0 0 chr17 89717561 89717591 -5555060 + L2b LINE L2 3237 3266 -109 2 1269 303 320 62 37 chr17 89718795 89718957 -5553694 - RMER15 LTR ERVL -14 561 396 2 1269 465 66 0 0 chr17 89719721 89719782 -5552869 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1269 843 139 0 0 chr17 89720283 89720463 -5552188 + (GA)n Simple_repeat Simple_repeat 1 180 0 2 1269 315 49 32 32 chr17 89720571 89720634 -5552017 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 2 1269 323 343 47 24 chr17 89720790 89720960 -5551691 - MER5A DNA MER1_type -15 174 1 2 1269 40 49 0 0 chr17 89721691 89721752 -5550899 + AT_rich Low_complexity Low_complexity 1 61 0 2 1269 267 349 39 39 chr17 89721754 89721785 -5550866 - RSINE1 SINE B4 0 165 137 2 1269 531 31 0 0 chr17 89721785 89721850 -5550801 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 2 1269 267 349 39 39 chr17 89721850 89721973 -5550678 - RSINE1 SINE B4 -29 136 11 2 1269 557 307 65 7 chr17 89722024 89722178 -5550473 - RSINE1 SINE B4 0 165 3 2 1269 180 0 0 0 chr17 89723917 89723937 -5548714 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1269 3782 200 26 4 chr17 89723963 89724726 -5547925 + Lx4B LINE L1 6275 7054 -4 2 1269 30 0 0 0 chr17 89724729 89724759 -5547892 + AT_rich Low_complexity Low_complexity 1 30 0 2 1269 1225 208 203 33 chr17 89724766 89724895 -5547756 - Lx9 LINE L1 0 7644 7519 2 1269 360 0 0 0 chr17 89724895 89724935 -5547716 + (TC)n Simple_repeat Simple_repeat 1 40 0 2 1269 234 62 0 0 chr17 89724935 89724966 -5547685 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1269 1225 208 203 33 chr17 89724966 89725317 -5547334 - Lx9 LINE L1 -126 7518 7082 2 1269 222 136 0 0 chr17 89726950 89726994 -5545657 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1269 865 294 117 24 chr17 89727466 89728042 -5544609 - MER63C DNA AcHobo -94 836 98 3 1269 3036 177 86 6 chr17 89728064 89728712 -5543939 - Lx4B LINE L1 -5 7053 6354 3 1269 306 269 198 37 chr17 89728762 89728924 -5543727 - MER31A LTR ERV1 -297 188 1 3 1269 349 289 95 40 chr17 89730421 89730569 -5542082 - HAL1-3A_ME LINE L1 -419 2439 2284 3 1269 22 0 0 0 chr17 89731364 89731386 -5541265 + AT_rich Low_complexity Low_complexity 1 22 0 3 1269 512 234 57 0 chr17 89732280 89732404 -5540247 + Kanga1a DNA Tc2 203 333 -421 3 1269 236 260 0 0 chr17 89732664 89732714 -5539937 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1269 353 241 93 180 chr17 89732860 89733138 -5539513 + MLT1B LTR MaLR 118 371 -19 3 1269 332 316 7 7 chr17 89733707 89733844 -5538807 - L1M5 LINE L1 -1267 4879 4743 3 1269 390 343 44 6 chr17 89734925 89735107 -5537544 - MER20 DNA MER1_type 0 219 31 3 1269 480 271 0 0 chr17 89735369 89735476 -5537175 - MER33 DNA MER1_type -210 114 8 3 1269 258 331 61 66 chr17 89737195 89737392 -5535259 - Tigger14a DNA MER2_type -115 209 14 3 1269 211 321 26 86 chr17 89737433 89737549 -5535102 - MIR SINE MIR -73 189 81 3 1269 562 67 54 22 chr17 89738077 89738169 -5534482 + B2_Mm2 SINE B2 91 185 -10 3 1269 238 314 66 39 chr17 89738173 89738537 -5534114 + L1M5 LINE L1 4901 5274 -872 3 1269 230 272 84 37 chr17 89738629 89738736 -5533915 + PB1D10 SINE Alu 5 116 -1 3 1269 690 340 133 16 chr17 89739422 89739798 -5532853 + MLT1D LTR MaLR 86 505 0 3 1269 235 326 91 10 chr17 89740868 89740967 -5531684 - MER20 DNA MER1_type -7 212 106 3 1269 1015 253 115 3 chr17 89742320 89742625 -5530026 + Lx9 LINE L1 6324 6662 -982 3 1269 21 71 0 0 chr17 89742835 89742877 -5529774 + AT_rich Low_complexity Low_complexity 1 42 0 3 1269 1084 78 28 0 chr17 89742925 89743067 -5529584 + B1_Mus1 SINE Alu 2 147 -1 3 1269 1053 96 0 0 chr17 89743390 89743568 -5529083 + (GA)n Simple_repeat Simple_repeat 1 178 0 3 1269 476 129 23 52 chr17 89743571 89743743 -5528908 + (CAGAGA)n Simple_repeat Simple_repeat 2 168 0 3 1269 645 101 0 0 chr17 89745371 89745470 -5527181 + (TCTG)n Simple_repeat Simple_repeat 2 100 0 3 1269 274 340 9 28 chr17 89745645 89745751 -5526900 + L1M4b LINE L1 294 397 -6937 3 1269 288 317 38 69 chr17 89746039 89746432 -5526219 + L1M4b LINE L1 2157 2537 -4565 3 1269 1751 202 16 24 chr17 89746432 89746813 -5525838 - ORR1C1 LTR MaLR 0 378 1 3 1269 216 0 0 0 chr17 89746836 89746860 -5525791 + (CCA)n Simple_repeat Simple_repeat 2 25 0 3 1269 383 291 97 30 chr17 89746887 89747259 -5525392 + L1M4b LINE L1 2551 2947 -4387 3 1269 275 298 198 5 chr17 89747572 89747673 -5524978 + PB1D10 SINE Alu 1 116 -1 3 1269 219 139 0 0 chr17 89747693 89747729 -5524922 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 1269 453 50 0 0 chr17 89747876 89747936 -5524715 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 1269 360 64 0 0 chr17 89748178 89748225 -5524426 + (CATA)n Simple_repeat Simple_repeat 2 48 0 3 1269 23 0 0 0 chr17 89748461 89748484 -5524167 + AT_rich Low_complexity Low_complexity 1 23 0 3 1269 316 389 26 13 chr17 89748574 89748806 -5523845 + L1M4c LINE L1 102 336 -6048 3 1269 24 0 0 0 chr17 89748966 89748990 -5523661 + AT_rich Low_complexity Low_complexity 1 24 0 3 1269 1084 85 0 0 chr17 89749325 89749466 -5523185 + B1_Mus2 SINE Alu 1 141 -6 3 1269 268 118 14 14 chr17 89749470 89749539 -5523112 + (CAAAAA)n Simple_repeat Simple_repeat 2 70 0 3 1269 311 301 34 50 chr17 89749539 89749658 -5522993 + L1M4b LINE L1 4824 4940 -2066 3 1269 606 122 0 0 chr17 89749721 89749819 -5522832 + (CA)n Simple_repeat Simple_repeat 1 98 0 3 1269 338 282 8 76 chr17 89750491 89750610 -5522041 + ID_B1 SINE B4 80 190 -34 3 1269 210 294 9 97 chr17 89750510 89750623 -5522028 + PB1D7 SINE Alu 18 120 0 3 1269 324 333 75 78 chr17 89750623 89750981 -5521670 + L1M4b LINE L1 5564 5920 -1086 3 1269 391 325 39 83 chr17 89751713 89751918 -5520733 + MER20 DNA MER1_type 2 197 -22 3 1269 2375 78 15 8 chr17 89751951 89752313 -5520338 - L1_Mus3 LINE L1 -484 6154 5787 3 1269 267 297 55 0 chr17 89752625 89752716 -5519935 + MIRb SINE MIR 137 232 -36 3 1269 2057 201 0 2 chr17 89752716 89753111 -5519540 - Lx LINE L1 -7 6647 6254 3 1269 2620 170 45 78 chr17 89753463 89754018 -5518633 - RLTR20A LTR ERVK 0 541 5 3 1269 22 35 0 0 chr17 89754393 89754422 -5518229 + AT_rich Low_complexity Low_complexity 1 29 0 3 1269 240 305 25 25 chr17 89755309 89755430 -5517221 + CT-rich Low_complexity Low_complexity 3 123 0 3 1269 21 0 0 0 chr17 89755457 89755478 -5517173 + AT_rich Low_complexity Low_complexity 1 21 0 3 1269 22 0 0 0 chr17 89757062 89757084 -5515567 + AT_rich Low_complexity Low_complexity 1 22 0 3 1269 225 94 0 0 chr17 89759544 89759576 -5513075 + (T)n Simple_repeat Simple_repeat 1 32 0 3 1269 944 320 83 36 chr17 89760138 89760228 -5512423 - MT2A LTR ERVL -2 531 429 3 1269 3368 38 46 100 chr17 89760228 89760730 -5511921 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1269 944 320 83 36 chr17 89760730 89761144 -5511507 - MT2A LTR ERVL -105 428 3 3 1269 7056 88 4 5 chr17 89762001 89763622 -5509029 + L1_Mus1 LINE L1 4947 6567 0 3 1269 583 335 91 45 chr17 89763933 89764439 -5508212 + MT2A LTR ERVL 2 530 -3 3 1269 223 174 0 0 chr17 89765912 89765958 -5506693 + A-rich Low_complexity Low_complexity 1 46 0 3 1269 648 283 57 24 chr17 89766503 89766713 -5505938 + B4A SINE B4 3 219 -73 3 1269 1140 63 0 0 chr17 89766730 89766888 -5505763 + (GA)n Simple_repeat Simple_repeat 2 159 0 3 1269 717 167 6 11 chr17 89767223 89767399 -5505252 + GA-rich Low_complexity Low_complexity 2 176 0 3 1269 7173 111 27 2 chr17 89768164 89770389 -5502262 - L1_Mus3 LINE L1 -8 6630 4959 3 1269 377 348 93 0 chr17 89771693 89771854 -5500797 - MER63A DNA AcHobo -34 176 1 3 1269 969 330 108 54 chr17 89772230 89773253 -5499398 - Lx9 LINE L1 -18 7626 6548 3 1269 230 206 13 52 chr17 89773308 89773385 -5499266 + (TTAGGG)n Simple_repeat Simple_repeat 5 78 0 3 1269 476 332 25 77 chr17 89774249 89774650 -5498001 + L1ME1 LINE L1 5703 6082 -97 3 1269 398 262 177 0 chr17 89774828 89774992 -5497659 - MIR SINE MIR -66 196 4 3 1269 274 321 122 41 chr17 89775406 89775578 -5497073 + B4A SINE B4 11 196 -96 3 1269 21 0 0 0 chr17 89775892 89775913 -5496738 + AT_rich Low_complexity Low_complexity 1 21 0 3 1269 467 26 39 13 chr17 89775961 89776039 -5496612 + (TCTA)n Simple_repeat Simple_repeat 4 83 0 3 1269 202 315 34 0 chr17 89776102 89776191 -5496460 + (CATATA)n Simple_repeat Simple_repeat 3 94 0 3 1269 215 323 0 0 chr17 89776128 89776190 -5496461 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 3 1269 681 258 93 41 chr17 89776283 89776477 -5496174 + B3 SINE B2 13 216 0 3 1269 189 0 0 0 chr17 89776602 89776623 -5496028 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 3 1269 181 338 14 14 chr17 89776906 89776975 -5495676 + L2a LINE L2 2920 2988 -387 3 1269 318 335 107 25 chr17 89777022 89777181 -5495470 + L2a LINE L2 3104 3275 -151 3 1269 1216 24 17 67 chr17 89777304 89777484 -5495167 + L1Md_F3 LINE L1 6413 6583 -1 3 1269 385 141 50 0 chr17 89777726 89777825 -5494826 + (TAGA)n Simple_repeat Simple_repeat 2 105 0 3 1269 275 281 31 0 chr17 89778183 89778247 -5494404 - MLT2B5 LTR ERVL -651 66 1 3 1269 244 300 25 0 chr17 89780477 89780557 -5492094 - L2 LINE L2 -993 2426 2345 3 1269 21 0 0 0 chr17 89782056 89782077 -5490574 + AT_rich Low_complexity Low_complexity 1 21 0 3 1269 432 0 0 0 chr17 89782859 89782907 -5489744 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1269 206 279 14 29 chr17 89782907 89782977 -5489674 + (TATG)n Simple_repeat Simple_repeat 2 70 0 3 1269 550 277 117 21 chr17 89783406 89783646 -5489005 - Arthur1B DNA Tip100 -216 1009 747 3 1269 288 238 16 32 chr17 89783659 89783785 -5488866 + (CATATA)n Simple_repeat Simple_repeat 6 129 0 3 1269 250 323 232 59 chr17 89783908 89784145 -5488506 - B4 SINE B4 -14 278 1 3 1270 322 242 51 62 chr17 89784713 89784891 -5487760 + L1M5 LINE L1 2400 2571 -3575 3 1270 521 329 19 0 chr17 89785027 89785053 -5487598 + B3A SINE B2 2 29 -169 3 1270 805 65 0 8 chr17 89785053 89785177 -5487474 + L1Md_F3 LINE L1 6448 6570 -14 3 1270 521 329 19 0 chr17 89785177 89785311 -5487340 + B3A SINE B2 30 164 -34 3 1270 825 107 0 0 chr17 89785314 89785436 -5487215 + (CA)n Simple_repeat Simple_repeat 1 122 0 3 1270 519 348 56 11 chr17 89785459 89785871 -5486780 + L1MC LINE L1 2738 3162 -2984 3 1270 733 296 120 66 chr17 89786154 89786595 -5486056 - RMER13A LTR ERVK -394 466 2 3 1270 369 264 112 64 chr17 89786612 89786924 -5485727 + L1M5 LINE L1 3181 3507 -2639 3 1270 332 264 112 81 chr17 89787074 89787297 -5485354 + L1M5 LINE L1 3740 3969 -2177 3 1270 1752 36 18 0 chr17 89787743 89787962 -5484689 + L1_Mus1 LINE L1 6345 6567 0 3 1270 668 344 36 20 chr17 89788717 89788966 -5483685 + B4 SINE B4 4 256 -36 3 1270 192 216 0 0 chr17 89788996 89789047 -5483604 + CT-rich Low_complexity Low_complexity 2 52 0 3 1270 418 277 10 0 chr17 89789607 89789708 -5482943 - Lx5 LINE L1 -312 6738 6637 3 1270 431 303 71 115 chr17 89790147 89790262 -5482389 - MTD LTR MaLR -63 356 257 3 1270 4382 14 0 2 chr17 89790262 89790756 -5481895 + MT2_Mm LTR ERVL 1 493 0 3 1270 431 303 71 115 chr17 89790756 89791005 -5481646 - MTD LTR MaLR -163 256 8 3 1270 3772 256 64 90 chr17 89791315 89791738 -5480913 + MMAR1 DNA Mariner 1 424 -862 3 1270 314 114 43 0 chr17 89791738 89791808 -5480843 - L1_Mus3 LINE L1 -1 6637 6565 3 1270 3772 256 64 90 chr17 89791808 89792704 -5479947 + MMAR1 DNA Mariner 425 1285 -1 3 1270 897 295 122 19 chr17 89793531 89793842 -5478809 + RMER5 LTR ERV1 1 343 -191 3 1270 797 203 0 6 chr17 89793850 89794028 -5478623 + CT-rich Low_complexity Low_complexity 4 180 0 3 1270 1019 125 14 0 chr17 89794033 89794177 -5478474 - B1_Mus1 SINE Alu -1 147 2 3 1270 644 228 43 57 chr17 89794177 89794386 -5478265 + RMER5 LTR ERV1 329 534 0 3 1270 477 0 0 0 chr17 89794886 89794939 -5477712 + (GA)n Simple_repeat Simple_repeat 2 54 0 3 1270 606 255 7 7 chr17 89797100 89797308 -5475343 + L1VL1 LINE L1 209 416 -6002 4 1270 2775 151 40 82 chr17 89797320 89798334 -5474317 + L1Md_F LINE L1 504 1447 -4436 4 1270 4721 122 12 3 chr17 89798332 89799105 -5473546 + MusHAL1 LINE L1 1567 2346 -366 4 1270 3628 114 2 2 chr17 89799105 89799632 -5473019 + L1_Mus2 LINE L1 6040 6566 0 4 1270 283 227 30 0 chr17 89799656 89799722 -5472929 + B4A SINE B4 2 69 -223 4 1270 7912 61 2 0 chr17 89800734 89801895 -5470756 - L1Md_F2 LINE L1 -3 6579 5417 4 1270 1091 102 0 0 chr17 89801905 89802052 -5470599 + B1_Mus2 SINE Alu 1 147 0 4 1270 4648 102 28 0 chr17 89802459 89803448 -5469203 - MusHAL1 LINE L1 -2326 1027 7 4 1270 1242 234 62 49 chr17 89806158 89806482 -5466169 - ORR1D1 LTR MaLR -34 340 13 4 1270 452 357 75 23 chr17 89806849 89807215 -5465436 + ERVL-E-int LTR ERVL 4103 4540 -1174 4 1270 5281 146 25 10 chr17 89807668 89808572 -5464079 + Lx3B LINE L1 6050 6967 -6 4 1270 259 319 82 82 chr17 89808653 89808824 -5463827 + MLT1B LTR MaLR 4 174 -216 4 1270 363 316 21 35 chr17 89808948 89809089 -5463562 + MLT1B LTR MaLR 242 380 -10 4 1270 576 237 0 0 chr17 89809966 89810139 -5462512 + (TG)n Simple_repeat Simple_repeat 2 174 0 4 1270 532 0 29 0 chr17 89810999 89811067 -5461584 + (TG)n Simple_repeat Simple_repeat 2 71 0 4 1270 720 308 14 5 chr17 89811371 89811580 -5461071 - Charlie26a DNA MER1_type -114 211 1 4 1270 229 167 35 53 chr17 89811759 89811816 -5460835 + L1_Mur2 LINE L1 2682 2737 -3140 4 1270 1243 86 0 0 chr17 89812111 89812285 -5460366 - L1_Mus2 LINE L1 -2 6564 6391 4 1270 401 306 25 20 chr17 89813057 89813254 -5459397 + RMER16-int LTR ERVK 169 366 -6878 4 1270 213 39 0 0 chr17 89813297 89813323 -5459328 + (TTTTC)n Simple_repeat Simple_repeat 2 27 0 4 1270 11473 54 1 1 chr17 89813339 89815500 -5457151 - L1Md_F2 LINE L1 -1 6581 4422 4 1270 540 0 0 0 chr17 89815594 89815654 -5456997 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 1270 1952 163 174 37 chr17 89815654 89816144 -5456507 + RMER16-int LTR ERVK 263 819 -4587 4 1270 597 208 25 0 chr17 89816149 89816269 -5456382 + RMER16-int LTR ERVK 938 1060 -5077 4 1270 1060 268 55 21 chr17 89816282 89816572 -5456079 + ETnERV2-int LTR ERVK 2454 2753 -4653 4 1270 8761 151 66 45 chr17 89816599 89816813 -5455838 + ETnERV2-int LTR ERVK 2935 3160 -4246 4 1270 181 270 143 0 chr17 89816813 89816876 -5455775 - MER5A DNA MER1_type -109 80 9 4 1270 8761 151 66 45 chr17 89816876 89818308 -5454343 + ETnERV2-int LTR ERVK 3161 4679 -2727 4 1270 3268 54 0 0 chr17 89818306 89818713 -5453938 + ETnERV2-int LTR ERVK 5356 5762 -1644 4 1270 5565 143 94 62 chr17 89818701 89819898 -5452753 + RLTR45-int LTR ERVK 4672 5907 -1337 4 1270 443 301 24 6 chr17 89820027 89820194 -5452457 + RLTR45-int LTR ERVK 6355 6524 -720 4 1270 473 305 8 0 chr17 89820243 89820374 -5452277 + RLTR45-int LTR ERVK 6494 6625 -781 4 1270 255 378 74 0 chr17 89820687 89820822 -5451829 + RLTR45-int LTR ERVK 7053 7197 -209 4 1270 649 99 11 0 chr17 89821291 89821382 -5451269 - L1_Mus2 LINE L1 -169 6397 6306 4 1270 1357 300 43 15 chr17 89821524 89822182 -5450469 + Lx6 LINE L1 6455 7431 -29 4 1270 738 23 0 0 chr17 89822449 89822537 -5450114 + (GAAAA)n Simple_repeat Simple_repeat 2 89 0 4 1270 943 201 24 4 chr17 89824082 89824337 -5448314 + L1_Mur3 LINE L1 1459 1718 -4162 4 1270 443 302 60 0 chr17 89825171 89825320 -5447331 + RSINE1 SINE B4 3 160 -5 4 1270 326 361 69 25 chr17 89825517 89825676 -5446975 + B4 SINE B4 125 290 -2 4 1270 294 205 0 0 chr17 89825684 89825767 -5446884 + (CA)n Simple_repeat Simple_repeat 1 83 0 4 1270 367 143 0 0 chr17 89825769 89825825 -5446826 + HAL1-3A_ME LINE L1 1976 2031 -827 4 1270 210 225 0 0 chr17 89825891 89825931 -5446720 + GA-rich Low_complexity Low_complexity 2 41 0 4 1270 576 29 0 0 chr17 89826165 89826235 -5446416 + (TG)n Simple_repeat Simple_repeat 1 70 0 4 1270 1289 165 16 4 chr17 89826420 89826670 -5445981 - Lx2 LINE L1 -444 5433 5181 4 1270 8770 139 16 12 chr17 89826663 89828236 -5444415 + Lx2 LINE L1 5414 6997 0 4 1270 25 31 0 0 chr17 89830899 89830931 -5441720 + AT_rich Low_complexity Low_complexity 1 32 0 4 1270 222 37 0 0 chr17 89832247 89832274 -5440377 + (CGATA)n Simple_repeat Simple_repeat 3 29 0 4 1270 618 351 24 68 chr17 89832705 89832953 -5439698 - B4 SINE B4 0 292 56 4 1270 1747 196 94 3 chr17 89833570 89833912 -5438739 + ORR1C1 LTR MaLR 6 378 0 4 1270 212 379 16 16 chr17 89834245 89834371 -5438280 - B1_Mm SINE Alu -9 138 13 4 1270 545 105 11 0 chr17 89834414 89834509 -5438142 + (TA)n Simple_repeat Simple_repeat 1 96 0 4 1270 208 79 53 0 chr17 89836797 89836835 -5435816 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 4 1270 279 246 0 28 chr17 89836834 89836963 -5435688 + (CATATA)n Simple_repeat Simple_repeat 1 125 0 4 1270 546 186 0 0 chr17 89837046 89837191 -5435460 + (CA)n Simple_repeat Simple_repeat 1 145 0 4 1270 23 0 0 0 chr17 89837476 89837499 -5435152 + AT_rich Low_complexity Low_complexity 1 23 0 4 1270 568 339 79 29 chr17 89837698 89838038 -5434613 - MTEa LTR MaLR -7 372 16 4 1270 442 224 46 18 chr17 89838500 89838609 -5434042 + PB1D7 SINE Alu 1 112 -8 4 1270 222 37 0 0 chr17 89838859 89838886 -5433765 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 1270 414 230 88 47 chr17 89839375 89839567 -5433084 - HAL1 LINE L1 -1048 1459 1260 4 1270 491 44 15 0 chr17 89839851 89839919 -5432732 + L1Md_F2 LINE L1 5235 5303 -580 4 1270 33853 35 0 0 chr17 89839920 89845327 -5427324 + L1Md_T LINE L1 86 5589 -297 4 1270 9025 6 0 0 chr17 89845327 89846323 -5426328 + L1Md_T LINE L1 5590 6585 0 4 1270 2311 54 0 0 chr17 89846323 89846617 -5426034 + L1Md_F2 LINE L1 5293 5586 -297 4 1270 6742 54 100 4 chr17 89846617 89847357 -5425294 + L1Md_F2 LINE L1 5587 6396 -186 4 1270 3225 40 27 5 chr17 89847357 89847759 -5424892 - IAPLTR2a LTR ERVK 0 411 1 4 1270 6742 54 100 4 chr17 89847759 89847926 -5424725 + L1Md_F2 LINE L1 6397 6580 -2 4 1270 356 350 80 55 chr17 89848002 89848404 -5424247 + LTR16A1 LTR ERVL 45 456 0 4 1270 259 294 72 18 chr17 89848718 89848829 -5423822 - MLT2C1 LTR ERVL -20 543 427 4 1270 514 340 116 3 chr17 89848850 89849151 -5423500 - Ricksha_c DNA MuDR -1306 742 408 4 1270 1097 15 8 0 chr17 89849864 89849995 -5422656 + (TC)n Simple_repeat Simple_repeat 2 133 0 4 1270 1114 78 0 0 chr17 89850001 89850143 -5422508 - B1_Mus2 SINE Alu -5 142 1 4 1270 189 358 15 0 chr17 89850149 89850216 -5422435 - MIR SINE MIR -159 103 36 4 1270 292 326 49 52 chr17 89850705 89850993 -5421658 - L1ME1 LINE L1 -207 5972 5686 4 1270 392 229 32 48 chr17 89852371 89852495 -5420156 + RLTR16 LTR ERVK 24 145 -360 4 1270 256 33 0 0 chr17 89853503 89853533 -5419118 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1270 539 139 8 25 chr17 89853533 89853651 -5419000 + (TA)n Simple_repeat Simple_repeat 2 117 0 4 1270 572 174 0 8 chr17 89854922 89855044 -5417607 + (TA)n Simple_repeat Simple_repeat 1 121 0 4 1270 578 365 39 12 chr17 89855145 89855403 -5417248 + MIRb SINE MIR 4 268 0 4 1270 417 206 0 0 chr17 89855969 89856071 -5416580 + (TG)n Simple_repeat Simple_repeat 2 103 0 4 1270 4225 181 53 70 chr17 89856536 89857441 -5415210 - RMER19B LTR ERVK -12 890 1 4 1270 390 215 38 9 chr17 89857454 89857581 -5415070 - Lx7 LINE L1 0 7696 7585 4 1270 240 35 0 0 chr17 89857590 89857619 -5415032 + (TAA)n Simple_repeat Simple_repeat 1 29 0 4 1270 4586 249 70 14 chr17 89857642 89857796 -5414855 - Lx7 LINE L1 -206 7490 7327 4 1270 369 0 0 0 chr17 89857796 89857837 -5414814 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 4 1270 4586 249 70 14 chr17 89857837 89859029 -5413622 - Lx7 LINE L1 -370 7326 6070 4 1270 456 62 0 0 chr17 89860677 89860741 -5411910 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 1270 1128 247 96 19 chr17 89860777 89861091 -5411560 + Lx5 LINE L1 6709 7046 -4 4 1270 180 0 0 0 chr17 89861094 89861114 -5411537 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 4 1270 483 87 0 0 chr17 89861117 89861186 -5411465 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 1270 471 63 0 0 chr17 89862369 89862432 -5410219 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 1270 504 86 0 0 chr17 89862432 89862501 -5410150 + (TA)n Simple_repeat Simple_repeat 2 71 0 4 1270 204 267 17 0 chr17 89862604 89862664 -5409987 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 1270 946 211 5 56 chr17 89862720 89862765 -5409886 - URR1B DNA MER1_type -20 205 166 4 1270 3888 21 21 80 chr17 89862765 89863289 -5409362 - MT2_Mm LTR ERVL 0 493 1 4 1270 946 211 5 56 chr17 89863289 89863459 -5409192 - URR1B DNA MER1_type -60 165 1 4 1270 24 32 0 0 chr17 89864456 89864487 -5408164 + AT_rich Low_complexity Low_complexity 1 31 0 4 1270 689 324 38 24 chr17 89864492 89864912 -5407739 + L1M2 LINE L1 4820 5245 -898 4 1270 328 127 40 40 chr17 89865150 89865224 -5407427 + ETnERV2-int LTR ERVK 7331 7404 -2 4 1270 2007 170 54 8 chr17 89865225 89865598 -5407053 + RLTR9D LTR ERVK 1 390 -13 4 1270 2505 154 180 0 chr17 89865703 89866465 -5406186 - Lx4B LINE L1 -1057 6001 5032 4 1270 2677 221 133 22 chr17 89866465 89867358 -5405293 + Lx2B LINE L1 6009 7000 0 4 1270 299 231 109 18 chr17 89867354 89867464 -5405187 + L1_Mur3 LINE L1 5303 5422 -458 4 1270 495 273 32 32 chr17 89867508 89867533 -5405118 + ID_B1 SINE B4 70 224 0 4 1270 903 115 0 0 chr17 89867533 89867663 -5404988 + B1_Mus1 SINE Alu 19 148 0 4 1270 1612 236 50 5 chr17 89867716 89868155 -5404496 + Lx9 LINE L1 7094 7552 -92 4 1270 2948 192 45 10 chr17 89868154 89868867 -5403784 + Lx7 LINE L1 5177 5927 -1769 4 1270 405 0 0 0 chr17 89868867 89868912 -5403739 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 1270 1616 222 119 26 chr17 89868912 89869129 -5403522 + Lx7 LINE L1 5928 6173 -1523 4 1270 429 109 0 0 chr17 89869132 89869196 -5403455 + (CA)n Simple_repeat Simple_repeat 2 65 0 4 1270 2772 237 62 9 chr17 89869196 89869406 -5403245 + Lx7 LINE L1 6261 6486 -1210 4 1270 228 35 0 0 chr17 89869406 89869435 -5403216 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 4 1270 2772 231 142 32 chr17 89869435 89870314 -5402337 + Lx7 LINE L1 6487 7457 -239 4 1270 784 127 12 0 chr17 89870350 89870515 -5402136 + (TG)n Simple_repeat Simple_repeat 2 168 0 4 1270 808 196 84 30 chr17 89870528 89870765 -5401886 + Lx7 LINE L1 7447 7696 0 4 1270 23 0 0 0 chr17 89870924 89870947 -5401704 + AT_rich Low_complexity Low_complexity 1 23 0 4 1270 316 223 14 2 chr17 89871766 89871836 -5400815 - ORR1E LTR MaLR -33 346 257 4 1270 21 0 0 0 chr17 89872540 89872561 -5400090 + AT_rich Low_complexity Low_complexity 1 21 0 4 1270 598 161 169 0 chr17 89872984 89873102 -5399549 + B1_Mur4 SINE Alu 1 138 -12 4 1270 227 259 0 16 chr17 89873380 89873442 -5399209 + PB1D7 SINE Alu 1 59 -90 4 1270 3399 105 4 6 chr17 89874502 89875000 -5397651 - L1_Mus1 LINE L1 -6 6561 6065 4 1270 6010 58 2 0 chr17 89875000 89875961 -5396690 + L1Md_F2 LINE L1 5089 6051 -531 4 1270 470 284 72 52 chr17 89875979 89876172 -5396479 - B3A SINE B2 -1 197 1 4 1270 183 200 0 0 chr17 89876174 89876204 -5396447 + L2c LINE L2 3101 3130 -257 5 1270 4170 95 21 0 chr17 89877497 89878463 -5394188 - L1_Mus2 LINE L1 -388 6178 5191 5 1270 4868 102 1 0 chr17 89878459 89879208 -5393443 + L1_Mm LINE L1 3528 4277 -1606 5 1270 2059 80 28 16 chr17 89879211 89879529 -5393122 + RLTRETN_Mm LTR ERVK 1 322 0 5 1270 17546 163 31 24 chr17 89879529 89886382 -5386269 + ETnERV2-int LTR ERVK 1 7299 -107 5 1270 2058 80 28 16 chr17 89886382 89886700 -5385951 + RLTRETN_Mm LTR ERVK 1 322 0 5 1270 2750 145 8 2 chr17 89886708 89887193 -5385458 + L1_Mm LINE L1 4282 4769 -1114 5 1270 1092 201 31 36 chr17 89887243 89887578 -5385073 + RMER17C LTR ERVK 1 391 -19 5 1270 306 130 0 18 chr17 89888825 89888880 -5383771 - Lx7 LINE L1 -6 7690 7637 5 1270 341 308 23 86 chr17 89890222 89890396 -5382255 - RSINE1 SINE B4 0 165 3 5 1270 385 319 147 68 chr17 89891216 89891552 -5381099 + MLT1A0 LTR MaLR 3 365 0 5 1270 6941 35 0 0 chr17 89891593 89892418 -5380233 + L1Md_A LINE L1 5757 6581 -1 5 1270 986 292 44 66 chr17 89892544 89893110 -5379541 + RMER1B Other Other 35 874 -468 5 1270 3442 250 92 1 chr17 89893089 89893955 -5378696 + RMER1A Other Other 86 1030 0 5 1270 195 368 0 14 chr17 89894134 89894203 -5378448 + MER5B DNA MER1_type 111 178 0 5 1270 189 171 0 0 chr17 89894537 89894572 -5378079 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 5 1270 510 321 14 14 chr17 89894835 89894977 -5377674 + RSINE1 SINE B4 2 143 -22 5 1270 3148 292 86 16 chr17 89895091 89896215 -5376436 - Lx8 LINE L1 -1 7472 6270 5 1270 258 57 57 0 chr17 89896221 89896274 -5376377 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 5 1270 6837 101 35 3 chr17 89896313 89897332 -5375319 - Lx3_Mus LINE L1 0 7009 5958 5 1270 6880 84 14 3 chr17 89897332 89897662 -5374989 + Lx3_Mus LINE L1 4942 5268 -618 5 1270 213 65 0 0 chr17 89897662 89897693 -5374958 + (CAA)n Simple_repeat Simple_repeat 3 33 0 5 1270 6880 83 7 1 chr17 89897693 89898350 -5374301 + Lx3_Mus LINE L1 5269 5936 -1073 5 1270 351 44 0 0 chr17 89898376 89898421 -5374230 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1270 29 60 0 0 chr17 89898750 89898800 -5373851 + AT_rich Low_complexity Low_complexity 1 50 0 5 1270 22 0 0 0 chr17 89898954 89898976 -5373675 + AT_rich Low_complexity Low_complexity 1 22 0 5 1270 241 282 149 22 chr17 89899378 89899559 -5373092 + L1MEc LINE L1 56 259 -6141 5 1270 279 0 0 0 chr17 89900053 89900084 -5372567 + (CAAAC)n Simple_repeat Simple_repeat 2 32 0 5 1270 2372 95 29 6 chr17 89900733 89901082 -5371569 + IAPEY2_LTR LTR ERVK 1 357 0 5 1270 21 57 0 0 chr17 89901292 89901327 -5371324 + AT_rich Low_complexity Low_complexity 1 35 0 5 1270 2260 23 0 0 chr17 89902986 89903249 -5369402 - L1Md_F3 LINE L1 -432 6152 5890 5 1270 870 25 0 32 chr17 89903265 89903391 -5369260 + L1Md_F3 LINE L1 6462 6583 -1 5 1270 307 319 11 0 chr17 89903391 89903485 -5369166 + MTE-int LTR MaLR 1447 1541 -39 5 1270 350 329 0 0 chr17 89904017 89904096 -5368555 - PB1D10 SINE Alu -37 80 2 5 1270 1733 170 55 77 chr17 89905104 89905468 -5367183 - ORR1B1 LTR MaLR 0 394 39 5 1270 487 328 16 25 chr17 89905485 89905668 -5366983 + B3A SINE B2 30 209 -7 5 1270 25234 153 12 6 chr17 89906608 89912180 -5360471 - L1_Mus3 LINE L1 -5 6633 1030 5 1270 432 0 0 0 chr17 89912341 89912389 -5360262 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1270 1218 97 0 0 chr17 89913365 89913540 -5359111 + (TTTC)n Simple_repeat Simple_repeat 2 176 0 5 1270 303 49 0 0 chr17 89913605 89913646 -5359005 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1270 488 16 16 0 chr17 89914058 89914119 -5358532 + (TTTTC)n Simple_repeat Simple_repeat 3 64 0 5 1270 1120 102 0 0 chr17 89914125 89914272 -5358379 - B1_Mus1 SINE Alu -1 147 1 5 158 3021 175 68 25 chr17 89915239 89915653 -5356998 + Lx5 LINE L1 6427 6868 -182 5 1271 6868 91 48 18 chr17 89915653 89916646 -5356005 + RLTR13D5 LTR ERVK 1 1023 0 5 1271 3021 175 68 25 chr17 89916646 89916822 -5355829 + Lx5 LINE L1 6869 7042 -8 5 1271 477 0 0 0 chr17 89917083 89917136 -5355515 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 5 1271 2056 119 53 6 chr17 89917146 89917467 -5355184 - Lx LINE L1 0 6654 6319 5 1271 1785 84 0 4 chr17 89917467 89917706 -5354945 + Lx LINE L1 6047 6284 -370 5 1271 909 253 70 54 chr17 89920285 89920544 -5352107 - Lx9 LINE L1 -962 6682 6420 5 1271 180 77 0 0 chr17 89920609 89920635 -5352016 + (TC)n Simple_repeat Simple_repeat 1 26 0 5 1271 265 93 18 18 chr17 89920637 89920692 -5351959 + (TA)n Simple_repeat Simple_repeat 1 55 0 5 1271 1651 216 96 35 chr17 89921088 89921597 -5351054 - Lx9 LINE L1 0 7644 7105 5 1271 655 222 67 18 chr17 89921593 89921758 -5350893 - Lx9 LINE L1 -694 6950 6778 5 1271 446 331 78 22 chr17 89922509 89922880 -5349771 + HAL1b LINE L1 1353 1744 -265 5 1271 297 0 0 0 chr17 89923232 89923265 -5349386 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 5 1271 253 224 65 0 chr17 89923369 89923476 -5349175 + (TA)n Simple_repeat Simple_repeat 1 114 0 5 1271 232 269 30 0 chr17 89923519 89923586 -5349065 + HAL1b LINE L1 1882 1950 -59 5 1271 1854 159 3 0 chr17 89923868 89924170 -5348481 - ORR1B1 LTR MaLR -8 386 84 5 1271 546 307 36 0 chr17 89924429 89924566 -5348085 + RSINE1 SINE B4 4 145 -20 5 1271 1035 128 0 0 chr17 89924817 89924965 -5347686 - B1_Mus1 SINE Alu 0 148 1 5 1271 31 0 0 0 chr17 89924992 89925023 -5347628 + AT_rich Low_complexity Low_complexity 1 31 0 5 1271 243 88 0 0 chr17 89925860 89925894 -5346757 + (TTG)n Simple_repeat Simple_repeat 3 36 0 5 1271 1372 287 25 45 chr17 89926118 89926647 -5346004 + L1VL4 LINE L1 154 671 -5631 5 1271 1437 81 9 26 chr17 89926648 89926876 -5345775 + L1_Mus3 LINE L1 6410 6633 -5 5 1271 456 67 0 0 chr17 89926965 89927025 -5345626 + (TAA)n Simple_repeat Simple_repeat 2 61 0 5 1271 983 200 105 0 chr17 89928247 89928447 -5344204 + URR1B DNA MER1_type 1 221 -4 5 1271 297 50 0 0 chr17 89928656 89928696 -5343955 - RLTR44C LTR ERVK -63 439 400 5 1271 7016 5 0 0 chr17 89928701 89929480 -5343171 - L1Md_A LINE L1 0 6582 5804 5 1271 6893 3 0 0 chr17 89929480 89930249 -5342402 + L1Md_A LINE L1 5021 5789 -94 5 1271 245 293 10 42 chr17 89930581 89930677 -5341974 + MER89 LTR ERV1 3 95 -464 5 1271 497 299 17 29 chr17 89930689 89930861 -5341790 + MER89 LTR ERV1 157 326 -233 5 1271 250 312 20 20 chr17 89930902 89931000 -5341651 + MER89 LTR ERV1 431 528 -31 5 1271 810 277 14 9 chr17 89931572 89931787 -5340864 - ID_B1 SINE B4 -5 219 4 5 1271 3773 142 8 6 chr17 89933921 89934544 -5338107 + L1_Mm LINE L1 4446 5069 -814 5 1271 1392 197 133 3 chr17 89934544 89934844 -5337807 - ORR1C1 LTR MaLR -39 339 1 5 1271 341 155 127 0 chr17 89935813 89935884 -5336767 - Lx LINE L1 -8 7636 7557 5 1271 270 0 0 0 chr17 89936261 89936291 -5336360 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 1271 234 286 83 67 chr17 89936803 89936983 -5335668 - L1MC4 LINE L1 -254 7788 7606 5 1271 499 198 115 15 chr17 89937036 89937236 -5335415 - Lx9 LINE L1 -1 7643 7424 5 1271 558 0 0 0 chr17 89937260 89937322 -5335329 + (TA)n Simple_repeat Simple_repeat 1 62 0 5 1271 1529 122 0 13 chr17 89937334 89937566 -5335085 - Lx2 LINE L1 -485 6512 6284 5 1271 2999 103 55 27 chr17 89937566 89938043 -5334608 + Lx2 LINE L1 6507 6996 -1 5 1271 2008 228 53 76 chr17 89938257 89938879 -5333772 + RMER19C LTR ERVK 2 609 -2 5 1271 4891 143 54 5 chr17 89938894 89939729 -5332922 - Lx LINE L1 -8 6646 5771 5 1271 307 160 45 45 chr17 89939729 89939836 -5332815 - L1_Mur1 LINE L1 -508 5378 5264 5 1271 493 322 87 9 chr17 89939812 89940273 -5332378 - L1M2 LINE L1 -1389 4754 4258 5 1271 810 48 0 0 chr17 89940273 89940376 -5332275 + (TG)n Simple_repeat Simple_repeat 1 103 0 5 1271 7122 90 27 3 chr17 89940464 89942142 -5330509 - L1_Mus2 LINE L1 0 6566 4865 5 1271 218 205 0 0 chr17 89942144 89942183 -5330468 + (TATATG)n Simple_repeat Simple_repeat 3 41 0 5 1271 433 324 170 23 chr17 89942196 89942673 -5329978 - L1M5 LINE L1 -843 5303 4757 5 1271 811 308 83 41 chr17 89942703 89943772 -5328879 - L1M5 LINE L1 -1428 4718 3605 5 1271 397 231 56 69 chr17 89943779 89943923 -5328728 + MER67D LTR ERV1 1 142 -372 5 1271 357 172 0 0 chr17 89943923 89944016 -5328635 + CT-rich Low_complexity Low_complexity 2 94 0 5 1271 1738 326 98 18 chr17 89944208 89945062 -5327589 - Lx8 LINE L1 -23 7450 6528 5 1271 572 346 47 65 chr17 89946570 89947061 -5325590 - HAL1 LINE L1 -1007 1500 1019 5 1271 372 208 61 30 chr17 89947138 89947237 -5325414 - ID_B1 SINE B4 -2 222 121 5 1271 498 323 66 51 chr17 89949496 89949770 -5322881 + B4A SINE B4 1 278 -14 5 1271 21 36 0 0 chr17 89949982 89950010 -5322641 + AT_rich Low_complexity Low_complexity 1 28 0 5 1271 410 310 68 34 chr17 89951538 89951715 -5320936 - MT2A LTR ERVL -85 448 266 5 1271 226 183 200 53 chr17 89951789 89951864 -5320787 - MTE2b LTR MaLR -292 87 2 5 1271 216 0 0 0 chr17 89951940 89951964 -5320687 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 1271 645 69 0 0 chr17 89951964 89952050 -5320601 + (TA)n Simple_repeat Simple_repeat 1 87 0 5 1271 211 0 88 0 chr17 89954016 89954050 -5318601 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 5 1271 279 271 35 12 chr17 89954583 89954669 -5317982 + L1MD3 LINE L1 6739 6826 -1169 5 1271 290 254 0 0 chr17 89954672 89954731 -5317920 - PB1D10 SINE Alu -17 100 42 5 1271 498 33 0 0 chr17 89954852 89954912 -5317739 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 1271 248 352 143 49 chr17 89955027 89955293 -5317358 + MLT1A0 LTR MaLR 75 365 0 5 1271 409 358 42 42 chr17 89955402 89955763 -5316888 + L1MD3 LINE L1 7323 7683 -312 5 1271 330 256 248 15 chr17 89955774 89955980 -5316671 + L1MD3 LINE L1 7740 7993 -2 5 1271 234 225 49 167 chr17 89957443 89957587 -5315064 - Charlie15a DNA MER1_type -2 222 96 5 1271 23 0 0 0 chr17 89958083 89958106 -5314545 + AT_rich Low_complexity Low_complexity 1 23 0 5 1271 239 176 143 29 chr17 89961300 89961338 -5311313 - Lx9 LINE L1 -293 7351 7305 5 1271 387 0 0 0 chr17 89961338 89961381 -5311270 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1271 239 176 143 29 chr17 89961381 89961412 -5311239 - Lx9 LINE L1 -340 7304 7274 5 1271 429 226 29 18 chr17 89961454 89961676 -5310975 + Lx9 LINE L1 7365 7637 -7 5 1271 1762 158 28 55 chr17 89961767 89961828 -5310823 + RMER1C Other Other 990 1039 -303 5 1271 3121 45 0 0 chr17 89961828 89962204 -5310447 - L1_Mus1 LINE L1 -2 6565 6190 6 1271 1762 158 28 55 chr17 89962204 89962505 -5310146 + RMER1C Other Other 1040 1342 0 5 1271 651 304 29 5 chr17 89963457 89963665 -5308986 + B3 SINE B2 4 216 0 6 1271 419 35 0 17 chr17 89963937 89963995 -5308656 + (CA)n Simple_repeat Simple_repeat 1 57 0 6 1271 232 196 118 0 chr17 89964318 89964369 -5308282 + MER58A DNA MER1_type 28 84 -140 6 1271 366 360 136 0 chr17 89965348 89965759 -5306892 - L1M5 LINE L1 -2302 3844 3378 6 1271 3311 126 0 17 chr17 89966025 89966664 -5305987 + Lx LINE L1 5341 5971 -683 6 1271 689 22 0 0 chr17 89966682 89966771 -5305880 + L1Md_A LINE L1 6492 6580 -2 6 1271 4363 134 7 10 chr17 89966771 89967466 -5305185 + Lx LINE L1 5956 6648 -6 6 1271 47 89 0 0 chr17 89967512 89967636 -5305015 + AT_rich Low_complexity Low_complexity 1 124 0 6 1271 351 369 56 32 chr17 89968183 89968432 -5304219 + MLT1J-int LTR MaLR 597 851 -536 6 1271 511 194 6 17 chr17 89968490 89968668 -5303983 + (TGG)n Simple_repeat Simple_repeat 2 177 0 6 1271 355 358 38 50 chr17 89968727 89968965 -5303686 + MLT1J-int LTR MaLR 985 1219 -168 6 1271 1227 243 163 66 chr17 89970848 89971302 -5301349 + RLTR20B3 LTR ERVK 1 498 -79 6 1271 522 46 0 0 chr17 89972151 89972216 -5300435 + (TA)n Simple_repeat Simple_repeat 2 66 0 6 1271 1212 262 47 6 chr17 89972583 89972905 -5299746 + ORR1D1 LTR MaLR 40 374 0 6 1271 685 298 101 30 chr17 89972918 89973456 -5299195 + Lx9 LINE L1 7065 7640 -4 6 1271 243 268 0 0 chr17 89973519 89973575 -5299076 + (CATA)n Simple_repeat Simple_repeat 2 57 0 6 1271 290 326 21 11 chr17 89973773 89973866 -5298785 + RMER1B Other Other 295 388 -678 6 1271 1942 232 80 38 chr17 89973875 89974427 -5298224 + RMER1B Other Other 492 1066 0 6 1271 668 279 5 31 chr17 89974442 89974634 -5298017 + B3A SINE B2 5 191 -7 6 1271 32 57 0 0 chr17 89974680 89974733 -5297918 + AT_rich Low_complexity Low_complexity 1 53 0 6 1271 883 193 6 39 chr17 89974836 89975014 -5297637 + B2_Mm2 SINE B2 3 174 -21 6 1271 7975 171 25 15 chr17 89975104 89976821 -5295830 - Lx4A LINE L1 0 7058 5314 6 1271 769 133 184 0 chr17 89976831 89976989 -5295662 + B2_Mm1t SINE B2 3 189 -4 6 1271 1142 138 9 14 chr17 89976992 89977213 -5295438 - Lx4A LINE L1 -2514 3363 3144 6 1271 1811 107 40 4 chr17 89977218 89977490 -5295161 - L1_Mus2 LINE L1 0 6566 6285 6 1271 6937 60 10 2 chr17 89977491 89978482 -5294169 + L1Md_F2 LINE L1 5473 6471 -111 6 1271 7369 146 52 161 chr17 89978475 89979469 -5293182 - Lx4A LINE L1 -2704 3173 2129 6 1271 306 0 0 0 chr17 89979469 89979503 -5293148 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1271 7369 162 49 102 chr17 89979503 89979850 -5292801 - Lx4A LINE L1 -3749 2128 1763 6 1271 1828 120 80 0 chr17 89979850 89980149 -5292502 + IAPEY2_LTR LTR ERVK 35 357 0 6 1271 7369 162 49 102 chr17 89980149 89981409 -5291242 - Lx4A LINE L1 -3749 1762 429 6 1271 24 32 0 0 chr17 89982630 89982661 -5289990 + AT_rich Low_complexity Low_complexity 1 31 0 6 1271 2267 264 102 30 chr17 89983420 89983675 -5288976 - L1_Rod LINE L1 -3442 2405 2123 6 1271 365 54 18 0 chr17 89983675 89983731 -5288920 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 1271 2267 266 97 28 chr17 89983731 89984711 -5287940 - L1_Rod LINE L1 -3725 2122 1079 6 1271 20042 186 65 12 chr17 89984972 89987325 -5285326 + Lx LINE L1 511 3172 -2714 6 1271 243 0 0 0 chr17 89987325 89987352 -5285299 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1271 20042 166 68 6 chr17 89987352 89990786 -5281865 + Lx LINE L1 3173 6654 0 6 1271 185 277 232 0 chr17 89991005 89991117 -5281534 - MIR3 SINE MIR 0 208 71 6 1271 7840 6 0 0 chr17 89992977 89993864 -5278787 - L1_Mm LINE L1 -434 5449 4563 6 1271 1252 0 0 0 chr17 89993863 89994000 -5278651 + L1_Mm LINE L1 5450 5586 -297 6 1271 9009 2 0 0 chr17 89994000 89994995 -5277656 + L1Md_A LINE L1 5587 6581 -1 6 1271 1113 239 4 38 chr17 89995407 89995672 -5276979 + Lx3C LINE L1 6718 6973 -3 6 1271 25 0 0 0 chr17 89995672 89995697 -5276954 + AT_rich Low_complexity Low_complexity 1 25 0 6 1271 720 287 142 34 chr17 89995713 89996038 -5276613 - MER57E1 LTR ERV1 0 372 13 6 1271 1812 257 62 19 chr17 89997308 89997776 -5274875 + Lx6 LINE L1 6796 7283 -177 6 1271 1050 110 0 0 chr17 89998066 89998212 -5274439 + B1_Mm SINE Alu 1 146 -1 6 1271 537 16 0 0 chr17 89998224 89998286 -5274365 + (GAA)n Simple_repeat Simple_repeat 3 64 0 6 1271 180 0 0 0 chr17 90000166 90000186 -5272465 + (CCA)n Simple_repeat Simple_repeat 3 22 0 1 1271 279 0 0 0 chr17 90001268 90001299 -5271352 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1271 620 323 15 0 chr17 90001312 90001507 -5271144 + B3 SINE B2 4 201 -15 3 1271 222 204 0 0 chr17 90001507 90001556 -5271095 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1271 1093 72 0 0 chr17 90003795 90003933 -5268718 + B1_Mm SINE Alu 1 138 -9 5 1271 200 35 35 0 chr17 90003933 90003962 -5268689 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 6 1271 1336 221 52 72 chr17 90005050 90005436 -5267215 - ORR1C1 LTR MaLR 0 378 1 7 1271 276 281 161 102 chr17 90005852 90006038 -5266613 + B3 SINE B2 1 197 -19 8 1271 395 38 0 19 chr17 90006373 90006427 -5266224 + (GAAA)n Simple_repeat Simple_repeat 2 54 0 9 1271 861 155 49 49 chr17 90007506 90007669 -5264982 + B2_Mm2 SINE B2 2 164 -31 1 1271 1043 276 66 46 chr17 90007833 90008319 -5264332 - L1_Rod LINE L1 -11 5836 5337 1 1271 5864 67 22 5 chr17 90008319 90009100 -5263551 + L1Md_F2 LINE L1 5776 6569 -13 1 1271 1043 276 66 46 chr17 90009100 90009157 -5263494 - L1_Rod LINE L1 -511 5336 5282 1 1271 442 30 30 0 chr17 90009261 90009328 -5263323 - L1Md_F3 LINE L1 -1 6583 6515 1 1271 22 0 0 0 chr17 90009345 90009367 -5263284 + AT_rich Low_complexity Low_complexity 1 22 0 1 1271 548 247 86 25 chr17 90009370 90009502 -5263149 - B3 SINE B2 0 216 75 1 1271 455 246 14 113 chr17 90009502 90009644 -5263007 + MT2A LTR ERVL 1 128 -405 1 1271 8176 131 34 5 chr17 90009652 90011341 -5261310 + Lx2A1 LINE L1 5266 6997 -11 1 1271 435 63 0 0 chr17 90011341 90011404 -5261247 + (TAAA)n Simple_repeat Simple_repeat 3 65 0 1 1271 683 264 115 15 chr17 90011412 90011626 -5261025 + MT2A LTR ERVL 99 461 -140 1 1271 7985 34 1 0 chr17 90011629 90012573 -5260078 + L1Md_T LINE L1 5635 6579 -3 1 1271 361 310 151 38 chr17 90012724 90012962 -5259689 + MLT1H1 LTR MaLR 38 302 -253 2 1271 21 0 0 0 chr17 90014908 90014929 -5257722 + AT_rich Low_complexity Low_complexity 1 21 0 2 1271 5042 108 7 1 chr17 90015098 90015830 -5256821 - L1_Mus4 LINE L1 -3 6633 5898 2 1271 5830 73 97 0 chr17 90015929 90016734 -5255917 - L1_Mus3 LINE L1 -7 6631 5749 2 1271 241 121 90 15 chr17 90016734 90016801 -5255850 + L1_Mm LINE L1 2328 2399 -1515 2 1271 9924 73 9 2 chr17 90016843 90018918 -5253733 - L1Md_F2 LINE L1 -10 6572 4483 2 1271 4397 66 2 0 chr17 90018917 90019526 -5253125 + L1Md_F2 LINE L1 3877 4486 -1397 2 1271 2706 135 25 4 chr17 90019526 90020002 -5252649 + L1_Mur2 LINE L1 4217 4702 -1175 2 1271 747 157 0 0 chr17 90020005 90020139 -5252512 + L1_Mur2 LINE L1 4961 5094 -792 2 1271 21 57 0 0 chr17 90020948 90020983 -5251668 + AT_rich Low_complexity Low_complexity 1 35 0 2 1271 7232 66 12 2 chr17 90021684 90023303 -5249348 - L1Md_F2 LINE L1 -3 6579 4946 2 1271 1889 79 0 4 chr17 90023301 90023568 -5249083 + L1Md_F2 LINE L1 4693 4958 -925 2 1271 259 346 40 40 chr17 90024066 90024265 -5248386 + Lx8 LINE L1 7094 7292 -181 2 1271 209 33 0 32 chr17 90024772 90024803 -5247848 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2 1271 32 43 0 0 chr17 90025297 90025343 -5247308 + AT_rich Low_complexity Low_complexity 1 46 0 2 1271 2730 135 36 0 chr17 90025428 90025902 -5246749 + Lx3C LINE L1 5854 6344 -632 3 1271 544 145 16 33 chr17 90025906 90026027 -5246624 + Lx3C LINE L1 6857 6975 -1 3 1271 304 399 30 0 chr17 90026143 90026311 -5246340 - ORR1E LTR MaLR -173 186 14 3 1271 405 0 0 0 chr17 90026642 90026687 -5245964 + (CTA)n Simple_repeat Simple_repeat 3 47 0 3 1271 25 31 0 0 chr17 90028314 90028346 -5244305 + AT_rich Low_complexity Low_complexity 1 32 0 3 1271 250 259 0 0 chr17 90028364 90028418 -5244233 + ORR1E LTR MaLR 14 67 -292 3 1271 22 35 0 0 chr17 90028709 90028738 -5243913 + AT_rich Low_complexity Low_complexity 1 29 0 3 1271 22 0 0 0 chr17 90028775 90028797 -5243854 + AT_rich Low_complexity Low_complexity 1 22 0 3 1271 556 38 25 0 chr17 90028799 90028878 -5243773 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 3 1271 624 334 95 22 chr17 90029007 90029365 -5243286 - MLT1B LTR MaLR -6 384 1 3 1271 405 0 0 0 chr17 90029389 90029434 -5243217 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 1271 823 276 38 79 chr17 90029515 90029999 -5242652 + RLTR11B LTR ERVK 1 477 -50 4 1271 26 30 0 0 chr17 90031967 90032000 -5240651 + AT_rich Low_complexity Low_complexity 1 33 0 4 1271 388 319 132 14 chr17 90032001 90032214 -5240437 + L1ME1 LINE L1 5369 5606 -578 4 1271 579 341 76 31 chr17 90032218 90032442 -5240209 + B4A SINE B4 5 238 -54 4 1271 1440 88 0 0 chr17 90032719 90032913 -5239738 + RLTR13D3 LTR ERVK 1 194 -920 4 1271 1755 88 0 4 chr17 90032913 90033154 -5239497 + RLTR13D3 LTR ERVK 315 554 -560 4 1271 2309 55 148 23 chr17 90033154 90033506 -5239145 + MTA_Mm LTR MaLR 1 396 0 4 1271 4113 86 7 5 chr17 90033506 90034070 -5238581 + RLTR13D3 LTR ERVK 550 1114 0 4 1271 372 94 0 0 chr17 90034090 90034143 -5238508 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 1271 282 307 104 70 chr17 90034245 90034648 -5238003 + L1ME1 LINE L1 5654 6070 -109 4 1271 634 290 6 61 chr17 90035284 90035449 -5237202 + B3A SINE B2 1 156 -42 4 1271 225 0 0 0 chr17 90035464 90035489 -5237162 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 1271 254 29 0 28 chr17 90035676 90035712 -5236939 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 4 1271 419 309 7 14 chr17 90037112 90037250 -5235401 - B1F SINE Alu -3 146 10 5 1271 252 0 0 0 chr17 90037396 90037424 -5235227 + (TAA)n Simple_repeat Simple_repeat 1 28 0 5 1271 740 285 44 22 chr17 90037624 90037897 -5234754 + B4A SINE B4 1 279 -13 5 1271 291 280 19 32 chr17 90038321 90038476 -5234175 - L1MDa LINE L1 -5389 1244 1092 5 1271 1739 219 35 0 chr17 90038650 90038993 -5233658 + RMER19B LTR ERVK 548 902 0 5 1271 216 256 0 0 chr17 90040112 90040155 -5232496 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 5 1271 952 102 7 42 chr17 90043500 90043643 -5229008 + B1_Mus1 SINE Alu 5 142 -6 5 1271 1080 53 30 0 chr17 90043658 90043791 -5228860 + B1_Mm SINE Alu 1 137 -10 5 1271 691 22 21 11 chr17 90043802 90043895 -5228756 + (GAAA)n Simple_repeat Simple_repeat 2 95 0 5 1271 570 172 0 0 chr17 90043993 90044121 -5228530 + (TG)n Simple_repeat Simple_repeat 1 128 0 5 1271 355 276 110 6 chr17 90044121 90044285 -5228366 - B3A SINE B2 -16 182 2 6 1271 327 25 0 0 chr17 90045953 90045993 -5226658 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 6 158 652 242 65 94 chr17 90046386 90046587 -5226064 - B3A SINE B2 -1 197 3 6 1272 185 392 78 0 chr17 90047354 90047456 -5225195 + L2a LINE L2 3310 3419 -7 6 1272 4006 142 33 3 chr17 90047799 90048457 -5224194 - RLTR33 LTR ERVK 0 678 1 6 1272 191 36 36 0 chr17 90049285 90049313 -5223338 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1272 260 268 0 58 chr17 90049812 90049915 -5222736 + CT-rich Low_complexity Low_complexity 1 97 0 6 1272 23 54 0 0 chr17 90050063 90050100 -5222551 + AT_rich Low_complexity Low_complexity 1 37 0 6 1272 927 245 74 9 chr17 90050267 90050592 -5222059 + Lx9 LINE L1 7284 7629 -15 6 1272 21 57 0 0 chr17 90050729 90050764 -5221887 + AT_rich Low_complexity Low_complexity 1 35 0 6 1272 265 347 53 13 chr17 90050767 90050919 -5221732 - L2 LINE L2 -1341 2078 1921 7 1272 682 299 94 3 chr17 90051010 90051309 -5221342 - Lx8 LINE L1 -367 7106 6781 7 1272 225 0 0 0 chr17 90051434 90051459 -5221192 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 7 1272 1312 188 74 41 chr17 90051460 90051798 -5220853 - Lx5 LINE L1 -16 7034 6686 7 1272 194 336 136 70 chr17 90052083 90052428 -5220223 - L2 LINE L2 -2161 1258 891 7 1272 417 39 0 0 chr17 90055391 90055442 -5217209 + (GGA)n Simple_repeat Simple_repeat 2 52 0 7 1272 531 0 0 0 chr17 90055442 90055501 -5217150 + (GA)n Simple_repeat Simple_repeat 1 59 0 7 1272 320 292 84 42 chr17 90055994 90056137 -5216514 - MLT1I LTR MaLR -1 410 262 7 1272 328 265 89 20 chr17 90056234 90056374 -5216277 - Lx8 LINE L1 -428 7032 6898 7 1272 903 296 60 7 chr17 90056700 90056999 -5215652 + Lx8 LINE L1 6884 7198 -275 7 1272 192 91 68 0 chr17 90058239 90058283 -5214368 + A-rich Low_complexity Low_complexity 2 48 0 7 1272 345 299 79 57 chr17 90058578 90058755 -5213896 + B3A SINE B2 2 182 -16 8 1272 728 293 125 90 chr17 90058896 90059320 -5213331 + MLT1D LTR MaLR 67 505 0 8 1272 32 57 0 0 chr17 90061248 90061301 -5211350 + AT_rich Low_complexity Low_complexity 1 53 0 8 1272 2301 218 30 10 chr17 90061788 90062288 -5210363 + Lx9 LINE L1 7008 7517 -127 8 1272 320 226 57 62 chr17 90062291 90062371 -5210280 + Lx9 LINE L1 7452 7526 -118 8 1272 294 95 0 0 chr17 90062371 90062413 -5210238 + (TA)n Simple_repeat Simple_repeat 1 42 0 8 1272 320 226 57 62 chr17 90062413 90062525 -5210126 + Lx9 LINE L1 7527 7643 -1 8 1272 2235 209 2 2 chr17 90064203 90064663 -5207988 + Lx LINE L1 6195 6654 0 8 1272 219 376 106 50 chr17 90065029 90065208 -5207443 + MIRb SINE MIR 41 229 -39 8 1272 7002 80 8 1 chr17 90066117 90067053 -5205598 - L1_Mus3 LINE L1 0 6638 5697 8 1272 8669 151 25 6 chr17 90067712 90070227 -5202424 + Lx2 LINE L1 4423 6991 -6 8 1272 256 359 65 35 chr17 90070468 90070699 -5201952 + L2 LINE L2 2701 2938 -481 9 1272 3750 102 33 9 chr17 90070699 90071243 -5201408 - L1_Mus3 LINE L1 -3 6635 6079 9 1272 1614 86 212 0 chr17 90071243 90071537 -5201114 + L1_Mus3 LINE L1 5706 6079 -505 9 1272 30178 121 11 18 chr17 90072785 90079123 -5193528 + L1_Mus1 LINE L1 408 6567 0 9 1272 24 0 0 0 chr17 90079124 90079148 -5193503 + AT_rich Low_complexity Low_complexity 1 24 0 9 1272 268 294 21 21 chr17 90079754 90079848 -5192803 - MIRc SINE MIR -111 157 64 9 1272 279 79 0 0 chr17 90079856 90079894 -5192757 + (GGGA)n Simple_repeat Simple_repeat 3 40 0 9 1272 307 63 0 87 chr17 90081464 90081533 -5191118 + A-rich Low_complexity Low_complexity 1 63 0 9 1272 310 351 140 33 chr17 90081850 90082215 -5190436 - L2 LINE L2 -357 3062 2659 9 1272 285 277 29 46 chr17 90082238 90082412 -5190239 + L1M5 LINE L1 3120 3290 -2856 9 1272 395 304 101 50 chr17 90082456 90082733 -5189918 + L1MD LINE L1 3455 3745 -2401 9 1272 471 343 70 5 chr17 90082779 90082978 -5189673 + ID_B1 SINE B4 11 222 -2 1 1272 782 254 15 25 chr17 90085628 90085826 -5186825 - URR1A DNA MER1_type -10 216 21 1 1272 1759 151 3 117 chr17 90086585 90086953 -5185698 - ORR1A4 LTR MaLR -1 328 3 1 1272 258 274 23 45 chr17 90087225 90087313 -5185338 + MTEa LTR MaLR 286 371 -8 1 1272 306 0 0 0 chr17 90087743 90087777 -5184874 + (A)n Simple_repeat Simple_repeat 1 34 0 1 1272 261 0 0 0 chr17 90088419 90088448 -5184203 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1272 3861 242 44 14 chr17 90089900 90091882 -5180769 - Lx5 LINE L1 -3 7047 4961 1 1272 3452 186 52 39 chr17 90091881 90092694 -5179957 + Lx5 LINE L1 4127 4949 -928 1 1272 24 32 0 0 chr17 90092831 90092862 -5179789 + AT_rich Low_complexity Low_complexity 1 31 0 1 1272 19379 182 27 32 chr17 90093121 90096600 -5176051 - Lx2A1 LINE L1 -3 7005 3478 1 1272 216 0 0 0 chr17 90096600 90096624 -5176027 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1 1272 19379 201 27 48 chr17 90096624 90097818 -5174833 - Lx2A1 LINE L1 -2406 3477 2304 1 1272 801 66 0 0 chr17 90097818 90097924 -5174727 - B1_Mm SINE Alu 0 147 42 1 1272 19379 201 27 48 chr17 90097924 90098823 -5173828 - Lx2A1 LINE L1 -2406 2303 1418 1 1272 216 24 0 68 chr17 90098823 90098867 -5173784 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 1 1272 19379 169 17 42 chr17 90098867 90099164 -5173487 - Lx2A1 LINE L1 -4466 1417 1122 1 1272 1968 154 9 0 chr17 90099164 90099488 -5173163 - ORR1A2 LTR MaLR 0 327 1 1 1272 2404 162 31 39 chr17 90099488 90099826 -5172825 - Lx2A1 LINE L1 -5513 1121 743 1 1272 2827 197 60 40 chr17 90100340 90100969 -5171682 - RLTR26 LTR ERVK 0 642 1 1 1272 21 82 0 0 chr17 90101730 90101779 -5170872 + AT_rich Low_complexity Low_complexity 1 49 0 1 1272 561 15 0 0 chr17 90102265 90102331 -5170320 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 1272 366 23 0 0 chr17 90102655 90102698 -5169953 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 1272 300 319 25 0 chr17 90104174 90104334 -5168317 + L1MC4a LINE L1 6916 7079 -803 1 1272 916 329 5 17 chr17 90104445 90104746 -5167905 + B4 SINE B4 3 292 0 1 1272 658 301 85 65 chr17 90104873 90105179 -5167472 - ORR1E LTR MaLR -3 356 45 1 1272 585 276 58 69 chr17 90105209 90105525 -5167126 + L1MC4a LINE L1 7350 7661 -221 1 1272 509 15 31 0 chr17 90105525 90105590 -5167061 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 1 1272 585 276 58 69 chr17 90105590 90105720 -5166931 + L1MC4a LINE L1 7662 7791 -91 1 1272 310 340 69 57 chr17 90105810 90105969 -5166682 + Arthur1A DNA Tip100 1 161 -16 1 1272 342 0 0 0 chr17 90106110 90106148 -5166503 + (GTTTG)n Simple_repeat Simple_repeat 2 39 0 1 1272 1084 65 0 0 chr17 90106148 90106286 -5166365 - B1_Mus1 SINE Alu -9 139 2 1 1272 1489 211 45 22 chr17 90108791 90109150 -5163501 + ORR1D1 LTR MaLR 2 368 -6 1 1272 27 62 0 0 chr17 90110618 90110666 -5161985 + AT_rich Low_complexity Low_complexity 1 48 0 1 1272 21 0 0 0 chr17 90111825 90111846 -5160805 + AT_rich Low_complexity Low_complexity 1 21 0 1 1272 349 294 59 0 chr17 90111867 90111969 -5160682 - PB1D7 SINE Alu -1 119 12 1 1272 1044 59 0 0 chr17 90112144 90112280 -5160371 + (TCCCC)n Simple_repeat Simple_repeat 5 140 0 1 1272 555 230 14 62 chr17 90112321 90112465 -5160186 - B1_Mur2 SINE Alu -10 139 3 1 1272 24 53 0 0 chr17 90112618 90112656 -5159995 + AT_rich Low_complexity Low_complexity 1 38 0 1 1272 250 313 26 0 chr17 90112675 90112790 -5159861 + GA-rich Low_complexity Low_complexity 4 121 0 1 1272 1508 174 165 36 chr17 90112920 90113284 -5159367 - MTC LTR MaLR -10 411 1 1 1272 5212 152 40 8 chr17 90113359 90114407 -5158244 - Lx2 LINE L1 -3 6997 5814 1 1272 29 47 0 0 chr17 90114829 90114872 -5157779 + AT_rich Low_complexity Low_complexity 1 43 0 1 1272 1210 242 39 103 chr17 90115642 90115993 -5156658 - Lx7 LINE L1 0 7696 7355 1 1272 234 62 0 0 chr17 90115993 90116025 -5156626 + (TAAG)n Simple_repeat Simple_repeat 4 35 0 1 1272 932 134 6 0 chr17 90116027 90116184 -5156467 + (GAAA)n Simple_repeat Simple_repeat 4 161 0 1 1272 1210 242 39 103 chr17 90116184 90116344 -5156307 - Lx7 LINE L1 -342 7354 7215 1 1272 297 0 0 0 chr17 90116451 90116484 -5156167 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1272 186 43 0 0 chr17 90116484 90116507 -5156144 + (GCTG)n Simple_repeat Simple_repeat 1 23 0 1 1272 471 349 41 56 chr17 90117022 90117341 -5155310 + MLT1B LTR MaLR 53 366 -24 1 1272 21 36 0 0 chr17 90118048 90118076 -5154575 + AT_rich Low_complexity Low_complexity 1 28 0 1 1272 358 295 0 16 chr17 90119263 90119523 -5153128 + (TATG)n Simple_repeat Simple_repeat 1 255 0 1 1272 181 230 0 44 chr17 90119580 90119671 -5152980 + (TATG)n Simple_repeat Simple_repeat 4 90 0 1 1272 21 0 0 0 chr17 90119958 90119979 -5152672 + AT_rich Low_complexity Low_complexity 1 21 0 1 1272 408 297 43 7 chr17 90121480 90121619 -5151032 - B1F SINE Alu 0 149 6 1 1272 317 43 21 0 chr17 90122144 90122191 -5150460 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 1 1272 259 268 70 0 chr17 90124684 90124755 -5147896 - ID4_ SINE ID 0 83 8 1 1272 258 315 62 18 chr17 90124828 90124941 -5147710 + PB1D7 SINE Alu 2 119 -1 1 1272 618 287 20 72 chr17 90124966 90125161 -5147490 + B3A SINE B2 14 198 0 1 1272 273 235 61 12 chr17 90125467 90125549 -5147102 + Kanga1c DNA Tc2 634 719 -10 1 1272 675 241 49 29 chr17 90125564 90125769 -5146882 + Lx9 LINE L1 7288 7496 -148 1 1272 4314 207 52 39 chr17 90125772 90125986 -5146665 - RLTR25B LTR ERVK 0 1028 807 1 1272 609 14 0 0 chr17 90125986 90126056 -5146595 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 1272 342 0 0 0 chr17 90126056 90126094 -5146557 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1272 4314 207 52 39 chr17 90126094 90126890 -5145761 - RLTR25B LTR ERVK -222 806 4 1 1272 459 0 0 0 chr17 90126899 90126950 -5145701 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1272 511 194 31 12 chr17 90126952 90127114 -5145537 + Lx9 LINE L1 7480 7644 0 1 1272 4311 210 94 16 chr17 90128088 90129375 -5143276 + L1_Mur3 LINE L1 65 1465 -4415 1 1272 3088 179 75 15 chr17 90129594 90130630 -5142021 + L1_Mur1 LINE L1 371 1768 -4118 1 1272 297 0 0 0 chr17 90130630 90130663 -5141988 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 1 1272 769 181 109 6 chr17 90130663 90130846 -5141805 - Lx2 LINE L1 -4 6993 6792 1 1272 883 225 27 103 chr17 90130848 90131185 -5141466 + Lx7 LINE L1 7139 7667 -29 1 1272 576 0 0 0 chr17 90133280 90133344 -5139307 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 1 1272 474 18 0 0 chr17 90133893 90133948 -5138703 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1272 446 326 23 8 chr17 90133962 90134092 -5138559 - B3A SINE B2 -65 133 2 1 1272 24 0 0 0 chr17 90134279 90134303 -5138348 + AT_rich Low_complexity Low_complexity 1 24 0 1 1272 568 222 3 3 chr17 90134828 90134953 -5137698 - B3 SINE B2 -73 125 1 1 1272 492 282 105 35 chr17 90135995 90136223 -5136428 + Zaphod DNA Tip100 363 606 -3425 1 1272 209 325 0 130 chr17 90136570 90136701 -5135950 + L2c LINE L2 3273 3386 -1 1 1272 368 282 25 8 chr17 90137802 90137920 -5134731 - PB1D9 SINE Alu 0 120 1 1 1272 390 327 76 26 chr17 90138061 90138325 -5134326 - L1MD1 LINE L1 -29 6213 5937 1 1272 305 341 65 43 chr17 90138373 90138511 -5134140 - RSINE1 SINE B4 -23 142 2 1 1272 706 310 65 8 chr17 90138706 90139061 -5133590 - L1MD1 LINE L1 -533 5709 5335 1 1272 267 287 142 13 chr17 90139179 90139412 -5133239 - L1MD1 LINE L1 -934 5212 4950 1 1272 2316 141 65 156 chr17 90139630 90140245 -5132406 - RLTR31_Mm LTR ERVK 0 561 3 1 1272 229 279 91 23 chr17 90140297 90140385 -5132266 - L1MD1 LINE L1 -1308 4838 4745 1 1272 23 0 0 0 chr17 90140385 90140408 -5132243 + AT_rich Low_complexity Low_complexity 1 23 0 1 1272 494 70 14 0 chr17 90140648 90140719 -5131932 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 1272 391 138 11 11 chr17 90140719 90140807 -5131844 + GA-rich Low_complexity Low_complexity 1 88 0 1 1272 231 200 14 41 chr17 90140836 90140909 -5131742 + (CAGAGA)n Simple_repeat Simple_repeat 4 74 0 1 1272 359 21 0 20 chr17 90140958 90141007 -5131644 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 1 1272 292 360 7 13 chr17 90141427 90141576 -5131075 - B1F SINE Alu -1 148 1 1 1272 653 74 21 0 chr17 90142444 90142539 -5130112 + (TAGA)n Simple_repeat Simple_repeat 2 98 0 1 1272 594 256 69 39 chr17 90143070 90143273 -5129378 + B3 SINE B2 2 210 -6 1 1272 25 0 0 0 chr17 90143498 90143523 -5129128 + AT_rich Low_complexity Low_complexity 1 25 0 1 1272 888 61 0 0 chr17 90143921 90144036 -5128615 + (GA)n Simple_repeat Simple_repeat 1 115 0 1 1272 261 0 0 0 chr17 90144783 90144812 -5127839 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 1 1272 3171 159 156 16 chr17 90145297 90145943 -5126708 + RMER19A LTR ERVK 1 737 0 1 1272 731 237 11 40 chr17 90146641 90146817 -5125834 - RLTR16 LTR ERVK -334 171 1 1 1272 405 0 0 0 chr17 90146944 90146989 -5125662 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1272 1138 303 50 14 chr17 90147302 90147663 -5124988 - MTD LTR MaLR 0 419 46 1 1272 628 191 0 90 chr17 90147686 90147853 -5124798 + RMER10B LTR ERVL 201 352 -46 1 1272 467 344 34 27 chr17 90148139 90148435 -5124216 + Lx8 LINE L1 6909 7206 -267 1 1272 1054 221 87 8 chr17 90150169 90150643 -5122008 + L1VL2 LINE L1 904 1435 -4442 1 1272 2351 119 58 12 chr17 90150638 90151055 -5121596 - L1_Mur1 LINE L1 -1634 4252 3817 1 1272 257 189 38 0 chr17 90151040 90151093 -5121558 + L1VL2 LINE L1 5072 5126 -760 1 1272 34441 69 16 7 chr17 90151078 90156305 -5116346 + L1Md_F3 LINE L1 298 5589 -297 1 1272 7640 57 10 0 chr17 90156305 90157279 -5115372 + L1Md_F3 LINE L1 5590 6573 -14 1 1272 2914 120 290 23 chr17 90157288 90157450 -5115201 + Lx3C LINE L1 5101 5262 -624 1 1272 378 0 0 0 chr17 90157450 90157492 -5115159 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1272 6602 149 130 11 chr17 90157492 90158994 -5113657 + Lx3C LINE L1 5263 6976 0 1 1272 9353 179 26 40 chr17 90159018 90161209 -5111442 + Lx4B LINE L1 1407 3567 -2310 1 1272 1225 127 77 0 chr17 90161215 90161436 -5111215 + Lx4B LINE L1 4362 4599 -1278 1 1272 4938 214 62 16 chr17 90161475 90163310 -5109341 + Lx4B LINE L1 5076 7037 -21 1 1272 441 0 0 0 chr17 90163310 90163359 -5109292 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 1 1272 6696 157 15 46 chr17 90163629 90165260 -5107391 + L1_Mur2 LINE L1 915 2555 -3322 1 1272 842 263 101 74 chr17 90165261 90165708 -5106943 - RMER6B LTR ERVK 0 461 3 1 1272 231 128 0 0 chr17 90165712 90165751 -5106900 + L1_Mur2 LINE L1 2553 2591 -3286 1 1272 931 278 35 126 chr17 90165754 90166215 -5106436 - RLTR23 LTR ERV1 -6 424 6 1 1272 1222 178 74 15 chr17 90166231 90166561 -5106090 + L1_Mur2 LINE L1 2618 3019 -2861 1 1272 3489 236 53 21 chr17 90166579 90167217 -5105434 + Lx5 LINE L1 6148 6816 -234 1 1272 837 0 0 0 chr17 90167217 90167310 -5105341 + (TTC)n Simple_repeat Simple_repeat 1 93 0 1 1272 200 34 0 33 chr17 90167315 90167345 -5105306 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1272 1021 96 0 0 chr17 90167346 90167482 -5105169 - B1_Mus1 SINE Alu -12 136 1 2 1272 3211 234 55 20 chr17 90167482 90167635 -5105016 + Lx5 LINE L1 6822 6975 -75 1 1272 22 35 0 0 chr17 90167656 90167685 -5104966 + AT_rich Low_complexity Low_complexity 1 29 0 2 1272 343 383 19 0 chr17 90167888 90168050 -5104601 - Lx8 LINE L1 -142 7331 7167 2 1272 745 228 4 75 chr17 90168322 90168550 -5104101 + Lx9 LINE L1 6712 6923 -721 2 1272 344 276 34 3 chr17 90169266 90169388 -5103263 - MIRc SINE MIR -18 250 113 2 1272 252 0 0 0 chr17 90170347 90170375 -5102276 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 1272 991 125 0 0 chr17 90171191 90171335 -5101316 + B2_Mm2 SINE B2 3 146 -49 2 1272 297 0 0 0 chr17 90171344 90171377 -5101274 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 2 1272 487 304 167 35 chr17 90172221 90172419 -5100232 - MTE2b LTR MaLR -34 345 122 2 1272 241 359 64 28 chr17 90173046 90173155 -5099496 + L2b LINE L2 3255 3367 -8 2 1272 332 301 78 19 chr17 90174435 90174667 -5097984 + L1MB5 LINE L1 4975 5222 -924 2 1272 559 294 97 12 chr17 90174919 90175239 -5097412 + L1MB5 LINE L1 5795 6141 -33 2 1272 846 56 0 0 chr17 90175327 90175435 -5097216 + (GGAAA)n Simple_repeat Simple_repeat 3 110 0 2 1272 268 295 0 23 chr17 90175440 90175572 -5097079 + A-rich Low_complexity Low_complexity 2 130 0 2 1272 1083 213 24 95 chr17 90175998 90176294 -5096357 - RLTR14 LTR ERV1 0 382 108 2 1272 724 239 34 39 chr17 90176294 90176499 -5096152 - RLTR25B LTR ERVK 0 1028 825 2 1272 410 175 88 0 chr17 90176503 90176583 -5096068 - RLTR14 LTR ERV1 -292 90 4 2 19 4670 144 0 26 chr17 90176961 90177762 -5094889 - Lx2 LINE L1 -29 6968 6189 2 1273 2776 91 30 2 chr17 90178209 90178605 -5094046 - MTB_Mm LTR MaLR 0 407 1 2 1273 271 330 0 0 chr17 90178690 90178781 -5093870 - RLTR14-int LTR ERV1 -740 4577 4487 2 1273 312 317 28 21 chr17 90179314 90179456 -5093195 - RLTR14-int LTR ERV1 -1893 3424 3282 2 1273 277 358 64 30 chr17 90180473 90180709 -5091942 - MMERGLN-int LTR ERV1 -3679 3877 3634 2 1273 9945 13 0 0 chr17 90181024 90182919 -5089732 - L1Md_T LINE L1 0 6582 4688 2 1273 21 0 0 0 chr17 90183435 90183456 -5089195 + AT_rich Low_complexity Low_complexity 1 21 0 2 1273 23 33 0 0 chr17 90183591 90183621 -5089030 + AT_rich Low_complexity Low_complexity 1 30 0 2 1273 1069 174 121 4 chr17 90183647 90183929 -5088722 + MYSERV16_I-int LTR ERVK 402 716 -1610 2 1273 5335 72 3 3 chr17 90183929 90184638 -5088013 + L1Md_F2 LINE L1 5874 6582 0 2 1273 248 235 0 0 chr17 90184643 90184711 -5087940 + A-rich Low_complexity Low_complexity 1 68 0 2 1273 711 0 0 0 chr17 90184735 90184814 -5087837 + (TTC)n Simple_repeat Simple_repeat 3 81 0 2 1273 270 77 0 0 chr17 90184945 90184957 -5087694 + (T)n Simple_repeat Simple_repeat 1 12 0 2 1273 3033 115 45 2 chr17 90184957 90185419 -5087232 - Lx3_Mus LINE L1 -5 7004 6523 2 1273 270 77 0 0 chr17 90185419 90185445 -5087206 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1273 4886 82 15 12 chr17 90185450 90186186 -5086465 + Lx3_Mus LINE L1 5773 6510 -499 2 1273 6514 179 49 9 chr17 90186308 90187642 -5085009 + MYSERV16_I-int LTR ERVK 813 2188 -138 2 1273 519 123 0 0 chr17 90187642 90187723 -5084928 + (TA)n Simple_repeat Simple_repeat 2 82 0 2 1273 6514 179 49 9 chr17 90187723 90187844 -5084807 + MYSERV16_I-int LTR ERVK 2189 2326 0 2 1273 2514 232 54 11 chr17 90187844 90188397 -5084254 + RLTR20B3 LTR ERVK 1 577 0 2 1273 3118 45 39 0 chr17 90188943 90189324 -5083327 + MTA_Mm LTR MaLR 1 396 0 2 1273 7875 53 36 59 chr17 90189324 90190447 -5082204 + MTA_Mm-int LTR MaLR 1 1098 0 2 1273 3071 42 42 0 chr17 90190447 90190827 -5081824 + MTA_Mm LTR MaLR 1 396 0 2 1273 1233 31 19 0 chr17 90190856 90191015 -5081636 - L1Md_A LINE L1 -1 6581 6420 2 1273 252 0 0 0 chr17 90191154 90191182 -5081469 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1273 594 0 0 0 chr17 90191182 90191248 -5081403 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 1273 6214 202 38 18 chr17 90192462 90194911 -5077740 - Lx5 LINE L1 0 7050 4534 2 1273 2623 46 0 3 chr17 90194920 90195247 -5077404 + IAPEY2_LTR LTR ERVK 32 357 0 2 1273 3333 168 66 45 chr17 90195250 90196073 -5076578 - Lx5 LINE L1 -1340 4537 3698 2 1273 877 149 6 0 chr17 90196071 90196239 -5076412 - L1_Mur2 LINE L1 -1881 3996 3828 2 1273 3226 180 16 76 chr17 90196238 90197067 -5075584 + L1_Mur1 LINE L1 4282 5060 -826 2 1273 2928 111 217 8 chr17 90197068 90197762 -5074889 + RLTR13D4 LTR ERVK 1 1033 0 2 1273 2564 143 24 0 chr17 90197762 90198215 -5074436 + L1_Mur1 LINE L1 5048 5511 -366 2 1273 919 156 25 4 chr17 90198222 90198387 -5074264 - RLTR1B LTR ERV1 0 587 363 2 1273 1227 96 55 20 chr17 90198408 90198583 -5074068 - RLTR1B LTR ERV1 -102 410 226 2 1273 4926 158 34 6 chr17 90198583 90199437 -5073214 + Lx2 LINE L1 6118 6995 -2 2 1273 1227 96 55 20 chr17 90199437 90199462 -5073189 - RLTR1B LTR ERV1 -287 225 203 2 1273 324 118 44 0 chr17 90199462 90199530 -5073121 + GA-rich Low_complexity Low_complexity 2 72 0 2 1273 2199 198 61 58 chr17 90199534 90200208 -5072443 - L1_Mur2 LINE L1 -2354 3523 2848 2 1273 2146 208 88 30 chr17 90200204 90201123 -5071528 - L1_Mur2 LINE L1 -3771 2106 1050 2 1273 935 144 52 0 chr17 90201123 90201276 -5071375 + B2_Mm2 SINE B2 1 161 -34 2 1273 234 0 0 0 chr17 90201276 90201302 -5071349 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2 1273 540 228 76 1 chr17 90201306 90201462 -5071189 - L1_Mur2 LINE L1 -6024 1062 897 2 1273 22 56 0 0 chr17 90201932 90201968 -5070683 + AT_rich Low_complexity Low_complexity 1 36 0 2 1273 206 194 0 16 chr17 90202467 90202530 -5070121 + CT-rich Low_complexity Low_complexity 1 62 0 2 1273 272 172 0 0 chr17 90202936 90202994 -5069657 + A-rich Low_complexity Low_complexity 57 114 0 2 1273 38 39 0 0 chr17 90204217 90204269 -5068382 + AT_rich Low_complexity Low_complexity 1 52 0 2 1273 1420 242 87 19 chr17 90205294 90205682 -5066969 + Lx9 LINE L1 7075 7495 -149 2 1273 201 74 0 0 chr17 90205682 90205709 -5066942 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1273 1420 242 87 19 chr17 90205709 90205746 -5066905 + Lx9 LINE L1 7496 7536 -108 2 1273 665 234 7 0 chr17 90205746 90205887 -5066764 + B1_Mur4 SINE Alu 2 143 -7 2 1273 486 0 0 0 chr17 90205888 90205942 -5066709 + (GA)n Simple_repeat Simple_repeat 1 54 0 2 1273 1420 242 87 19 chr17 90205942 90206040 -5066611 + Lx9 LINE L1 7537 7636 -8 2 1273 387 0 0 0 chr17 90207195 90207238 -5065413 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1273 3868 159 118 10 chr17 90207294 90208114 -5064537 + L1VL2 LINE L1 96 1004 -5331 2 1273 1096 101 0 0 chr17 90208114 90208262 -5064389 + B1_Mus1 SINE Alu 1 148 0 2 1273 2155 127 29 5 chr17 90208270 90208688 -5063963 + MusHAL1 LINE L1 55 482 -2230 2 1273 7135 47 0 0 chr17 90208688 90209595 -5063056 + L1_Mm LINE L1 4883 5789 -94 2 1273 22562 137 11 16 chr17 90209590 90214568 -5058083 + L1_Mus3 LINE L1 1690 6638 0 2 1273 192 222 73 18 chr17 90214960 90215015 -5057636 + L2 LINE L2 1989 2046 -1373 2 1273 198 0 0 0 chr17 90215256 90215278 -5057373 + (T)n Simple_repeat Simple_repeat 1 22 0 2 1273 36687 7 1 1 chr17 90215504 90221287 -5051364 + L1Md_A LINE L1 1 5586 -297 2 1273 9093 1 0 0 chr17 90221287 90222283 -5050368 + L1Md_A LINE L1 5587 6582 0 2 1273 387 0 0 0 chr17 90222301 90222344 -5050307 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1273 213 39 0 0 chr17 90222389 90222415 -5050236 + (A)n Simple_repeat Simple_repeat 1 26 0 2 1273 22 0 0 0 chr17 90222772 90222794 -5049857 + AT_rich Low_complexity Low_complexity 1 22 0 2 1273 981 135 0 0 chr17 90222794 90222942 -5049709 - B1_Mus1 SINE Alu 0 148 1 2 1273 21 89 0 0 chr17 90222960 90223016 -5049635 + AT_rich Low_complexity Low_complexity 1 56 0 2 1273 989 199 69 32 chr17 90223170 90223388 -5049263 + MTC LTR MaLR 157 382 -39 2 1273 237 229 10 59 chr17 90223567 90223669 -5048982 + L1MD LINE L1 4231 4327 -1819 2 1273 438 292 36 44 chr17 90224218 90224469 -5048182 - L1M4 LINE L1 -1316 4830 4582 2 1273 207 88 0 0 chr17 90224990 90225024 -5047627 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 2 1273 279 0 0 0 chr17 90225040 90225071 -5047580 + (TC)n Simple_repeat Simple_repeat 2 32 0 2 1273 546 16 0 0 chr17 90225071 90225133 -5047518 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 1273 925 250 67 33 chr17 90225696 90226085 -5046566 + L1M2 LINE L1 4846 5247 -896 2 1273 309 282 0 0 chr17 90226362 90226447 -5046204 + L1MA6 LINE L1 6028 6112 -188 2 1273 218 369 15 69 chr17 90226964 90227095 -5045556 - L4 LINE RTE -493 1536 1413 2 1273 28 29 0 0 chr17 90227712 90227747 -5044904 + AT_rich Low_complexity Low_complexity 1 35 0 2 1273 24 32 0 0 chr17 90228354 90228385 -5044266 + AT_rich Low_complexity Low_complexity 1 31 0 2 1273 327 121 0 0 chr17 90228444 90228502 -5044149 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1273 1896 150 61 5 chr17 90228542 90228917 -5043734 + Lx2 LINE L1 5875 6270 -727 2 1273 295 253 0 39 chr17 90229744 90229822 -5042829 - MTEb LTR MaLR -14 365 291 2 1273 381 319 141 24 chr17 90230117 90230287 -5042364 + MLT1J1 LTR MaLR 1 190 -254 2 1273 360 0 0 0 chr17 90230669 90230709 -5041942 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1273 389 318 52 17 chr17 90230710 90230883 -5041768 + B4A SINE B4 93 271 -21 2 1273 705 24 0 0 chr17 90230885 90230968 -5041683 + (CA)n Simple_repeat Simple_repeat 1 83 0 2 1273 1112 85 34 0 chr17 90232374 90232551 -5040100 + L1_Mur1 LINE L1 3759 3941 -1945 2 1273 820 286 5 0 chr17 90232706 90232895 -5039756 + B3 SINE B2 2 191 -25 2 1273 180 77 0 0 chr17 90232899 90232925 -5039726 + (CAAT)n Simple_repeat Simple_repeat 2 27 0 2 1273 21 57 0 0 chr17 90233186 90233221 -5039430 + AT_rich Low_complexity Low_complexity 1 35 0 2 1273 37858 30 0 0 chr17 90233229 90239642 -5033009 - L1Md_T LINE L1 0 6585 76 2 1273 230 313 65 15 chr17 90239854 90240055 -5032596 + L1M2 LINE L1 5708 5918 -379 2 1273 376 157 201 36 chr17 90240069 90240208 -5032443 + RMER17C-int LTR ERVK 1855 2016 -1222 2 1273 492 154 281 0 chr17 90240207 90240342 -5032309 + RMER17C-int LTR ERVK 2170 2342 -896 2 1273 1117 137 312 13 chr17 90240340 90240644 -5032007 + RMER17C-int LTR ERVK 2533 2927 -311 2 1273 691 67 0 0 chr17 90240693 90240782 -5031869 + BGLII LTR ERVK 333 421 0 2 1273 268 156 0 22 chr17 90241159 90241205 -5031446 - B4A SINE B4 -233 59 15 2 1273 721 268 117 15 chr17 90241254 90241527 -5031124 - RMER5 LTR ERV1 -201 333 33 2 1273 746 297 78 18 chr17 90241606 90241939 -5030712 - ORR1E LTR MaLR -2 357 5 2 1273 1123 65 0 0 chr17 90242190 90242328 -5030323 + B1_Mus2 SINE Alu 3 140 -7 2 1273 245 299 51 13 chr17 90242458 90242536 -5030115 - MTC LTR MaLR -147 272 192 2 1273 7998 52 1 8 chr17 90242547 90243728 -5028923 - L1Md_F2 LINE L1 -5 6577 5407 2 1273 605 277 105 34 chr17 90243728 90243937 -5028714 - MTC LTR MaLR -180 241 18 2 1273 198 91 0 0 chr17 90244021 90244054 -5028597 + (A)n Simple_repeat Simple_repeat 1 33 0 2 1273 226 322 132 25 chr17 90244314 90244435 -5028216 + B1F2 SINE Alu 7 140 -9 3 1273 321 254 40 47 chr17 90244455 90244561 -5028090 + ID4 SINE ID 8 112 -40 3 1273 980 290 37 0 chr17 90244749 90245049 -5027602 + Lx9 LINE L1 7124 7434 -210 3 1273 281 193 68 0 chr17 90245077 90245165 -5027486 + Lx9 LINE L1 7550 7643 -1 3 1273 296 290 19 9 chr17 90245283 90245391 -5027260 + L1MD LINE L1 4180 4288 -1858 3 1273 25 0 0 0 chr17 90245535 90245560 -5027091 + AT_rich Low_complexity Low_complexity 1 25 0 3 1273 180 0 0 0 chr17 90246410 90246430 -5026221 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1273 383 267 30 0 chr17 90247426 90247527 -5025124 - B1F SINE Alu -41 108 5 3 1273 23 0 0 0 chr17 90247686 90247709 -5024942 + AT_rich Low_complexity Low_complexity 1 23 0 3 1273 22 0 0 0 chr17 90247764 90247786 -5024865 + AT_rich Low_complexity Low_complexity 1 22 0 3 1273 5490 62 38 6 chr17 90249045 90249777 -5022874 - L1Md_F2 LINE L1 0 6582 5827 3 1273 1816 137 45 24 chr17 90250362 90250698 -5021953 - Lx LINE L1 -7 6647 6305 3 1273 388 192 0 39 chr17 90250701 90250804 -5021847 + Lx LINE L1 6550 6648 -6 3 1273 2659 106 12 9 chr17 90250813 90251232 -5021419 + Lx3_Mus LINE L1 1687 2106 -3780 3 1273 20817 101 8 65 chr17 90251235 90253819 -5018832 + Lx3_Mus LINE L1 2583 5038 -848 3 1273 727 145 101 0 chr17 90253819 90253957 -5018694 + L1_Mus2 LINE L1 6414 6565 -1 3 1273 20817 111 10 40 chr17 90253957 90255865 -5016786 + Lx3_Mus LINE L1 5039 6866 -143 3 1273 637 197 54 7 chr17 90256162 90256310 -5016341 - URR1A DNA MER1_type -4 222 68 3 1273 1047 78 0 0 chr17 90257340 90257482 -5015169 + (TTC)n Simple_repeat Simple_repeat 3 144 0 3 1273 8398 114 17 8 chr17 90257492 90259264 -5013387 - Lx3_Mus LINE L1 -19 6990 5202 3 1273 5859 98 1 2 chr17 90259263 90260102 -5012549 + Lx3_Mus LINE L1 4372 5209 -677 3 1273 348 24 0 0 chr17 90260158 90260199 -5012452 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1273 600 226 293 16 chr17 90261012 90261268 -5011383 + Lx9 LINE L1 7282 7608 -36 3 1273 21 36 0 0 chr17 90261649 90261677 -5010974 + AT_rich Low_complexity Low_complexity 1 28 0 3 1273 21 0 0 0 chr17 90261861 90261882 -5010769 + AT_rich Low_complexity Low_complexity 1 21 0 3 1273 22 35 0 0 chr17 90262333 90262362 -5010289 + AT_rich Low_complexity Low_complexity 1 29 0 3 1273 268 282 115 0 chr17 90263660 90263738 -5008913 - ID4_ SINE ID -48 104 18 3 1273 540 242 29 29 chr17 90263894 90264030 -5008621 - B1_Mus2 SINE Alu -6 141 6 3 1273 239 143 0 0 chr17 90263999 90264034 -5008617 - MT2C_Mm LTR ERVL -234 241 207 3 1273 180 0 0 0 chr17 90265129 90265149 -5007502 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 1273 338 149 30 0 chr17 90265568 90265635 -5007016 + GA-rich Low_complexity Low_complexity 3 71 0 3 1273 578 269 16 31 chr17 90266104 90266324 -5006327 + B3A SINE B2 1 216 0 3 1273 2872 188 14 38 chr17 90266389 90266964 -5005687 - L1VL1 LINE L1 -5668 754 194 3 1273 1858 220 179 37 chr17 90267222 90267948 -5004703 + RMER6C LTR ERVK 1 716 -4 3 1273 1447 260 26 0 chr17 90268003 90268342 -5004309 - Lx6 LINE L1 -4 7456 7109 3 1273 300 348 37 49 chr17 90268794 90268957 -5003694 + RSINE1 SINE B4 3 163 -2 3 1273 233 182 0 18 chr17 90268959 90269015 -5003636 + (CA)n Simple_repeat Simple_repeat 1 55 0 3 1273 306 299 237 5 chr17 90269288 90269486 -5003165 + Lx8 LINE L1 6479 6722 -751 3 1273 445 284 93 93 chr17 90269575 90269897 -5002754 + Lx8 LINE L1 7123 7444 -29 3 1273 1562 214 70 77 chr17 90269898 90270453 -5002198 + BGLII_B LTR ERVK 1 435 -6 3 1273 746 219 35 63 chr17 90270983 90271237 -5001414 - RCHARR1 DNA MER1_type -4 970 724 3 1273 1182 279 36 69 chr17 90271219 90271638 -5001013 - RCHARR1 DNA MER1_type -569 405 1 3 1273 462 187 0 0 chr17 90271834 90271925 -5000726 + (TA)n Simple_repeat Simple_repeat 2 92 0 3 1273 1556 172 25 40 chr17 90271935 90272256 -5000395 - ORR1A4 LTR MaLR -9 320 5 3 1273 516 45 0 0 chr17 90272257 90272324 -5000327 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 1273 237 268 18 0 chr17 90272765 90272821 -4999830 + RLTR25B LTR ERVK 1 57 -971 3 1273 313 323 44 97 chr17 90272824 90273030 -4999621 + RLTR25B LTR ERVK 13 207 -821 3 1273 26665 73 1 5 chr17 90274091 90279439 -4993212 + L1Md_F2 LINE L1 262 5585 -298 3 1273 8046 47 1 5 chr17 90279440 90280440 -4992211 + L1Md_F2 LINE L1 5587 6582 0 3 1273 248 325 28 78 chr17 90280496 90280676 -4991975 + RLTR25B LTR ERVK 933 1103 0 3 1273 1033 116 14 0 chr17 90280844 90280990 -4991661 + B1_Mus1 SINE Alu 1 148 0 3 1273 23 54 0 0 chr17 90281667 90281704 -4990947 + AT_rich Low_complexity Low_complexity 1 37 0 3 1273 7250 82 0 0 chr17 90281704 90282921 -4989730 - L1_Mus1 LINE L1 0 6567 5351 3 1273 339 304 38 0 chr17 90283105 90283184 -4989467 + B1F1 SINE Alu 9 90 -59 3 1273 563 24 47 0 chr17 90283767 90283852 -4988799 + (TG)n Simple_repeat Simple_repeat 2 90 0 3 1273 809 292 48 0 chr17 90283947 90284197 -4988454 - Lx6 LINE L1 -26 7434 7173 3 1273 250 264 11 11 chr17 90287015 90287103 -4985548 - ETnERV2-int LTR ERVK -1888 5518 5431 3 1273 454 284 66 47 chr17 90288182 90288623 -4984028 - MMERVK10C-int LTR ERVK -4120 3461 3082 3 1273 251 292 0 0 chr17 90289166 90289238 -4983413 - MMERVK10C-int LTR ERVK -4724 2195 2124 3 1273 205 118 38 38 chr17 90290859 90290912 -4981739 + (CAA)n Simple_repeat Simple_repeat 2 54 0 3 1273 239 226 0 0 chr17 90291258 90291320 -4981331 + (CAGAGA)n Simple_repeat Simple_repeat 5 66 0 3 1273 401 345 93 0 chr17 90291345 90291484 -4981167 - B3A SINE B2 -46 152 1 3 1273 9098 108 3 1 chr17 90291873 90293305 -4979346 + L1_Mm LINE L1 1713 3148 -2735 3 1273 1649 109 0 36 chr17 90293293 90293570 -4979081 + L1_Mm LINE L1 5050 5316 -567 3 1273 4609 88 0 228 chr17 90293567 90294132 -4978519 + L1_Mus2 LINE L1 5011 5475 -408 3 1273 8080 44 1 10 chr17 90294132 90295137 -4977514 + L1Md_F2 LINE L1 5587 6582 0 3 1273 7000 78 9 51 chr17 90295137 90296375 -4976276 + L1_Mus2 LINE L1 5476 6566 0 3 1273 440 324 112 40 chr17 90296385 90296813 -4975838 - MLT1F2-int LTR MaLR -1025 464 6 3 1273 305 338 126 14 chr17 90296973 90297180 -4975471 - MLT1F2 LTR MaLR -113 447 218 3 1273 251 67 44 0 chr17 90297231 90297276 -4975375 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 3 1273 230 355 90 8 chr17 90297286 90297408 -4975243 - MLT1F2 LTR MaLR -424 136 5 3 1273 413 283 103 46 chr17 90298547 90298721 -4973930 - MER2 DNA MER2_type -150 195 12 3 1273 3324 150 36 57 chr17 90299983 90300599 -4972052 - RLTR26 LTR ERVK 0 642 40 3 1273 322 86 0 54 chr17 90300830 90300904 -4971747 + (TCTCTG)n Simple_repeat Simple_repeat 3 72 0 3 1273 552 100 0 0 chr17 90300910 90300990 -4971661 + (TG)n Simple_repeat Simple_repeat 1 80 0 3 1273 385 273 15 97 chr17 90301325 90301420 -4971231 - MLT1A0 LTR MaLR 0 365 281 3 1273 1042 130 17 6 chr17 90301420 90301598 -4971053 - L1_Mus3 LINE L1 -7 6631 6452 3 1273 385 273 15 97 chr17 90301598 90301636 -4971015 - MLT1A0 LTR MaLR -85 280 243 3 1273 888 361 108 28 chr17 90301835 90302371 -4970280 - MER21B LTR ERV1 -185 678 100 3 1273 284 338 167 32 chr17 90302803 90303145 -4969506 - LTR73 LTR ERV1 -17 555 168 3 1273 840 195 0 0 chr17 90303147 90303321 -4969330 + (TA)n Simple_repeat Simple_repeat 2 175 0 3 1273 199 337 91 10 chr17 90303642 90303741 -4968910 + L3b LINE CR1 64 170 -312 3 1273 2404 102 82 100 chr17 90304160 90304651 -4968000 + RLTR45 LTR ERVK 1 482 0 3 1273 384 77 0 0 chr17 90304853 90304905 -4967746 + (TATG)n Simple_repeat Simple_repeat 1 52 0 3 1273 425 180 0 11 chr17 90305005 90305095 -4967556 + (TATATG)n Simple_repeat Simple_repeat 5 93 0 3 1273 197 146 0 20 chr17 90305094 90305143 -4967508 + GA-rich Low_complexity Low_complexity 2 49 0 3 1273 243 0 0 0 chr17 90305156 90305183 -4967468 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1273 666 322 62 10 chr17 90305311 90305875 -4966776 - L1_Mur3 LINE L1 -1846 4034 3441 3 1273 837 309 68 15 chr17 90306086 90306694 -4965957 - L1_Mur3 LINE L1 -2970 2877 2245 3 1273 289 177 25 0 chr17 90306701 90306780 -4965871 + (TA)n Simple_repeat Simple_repeat 2 82 0 3 1273 217 217 16 16 chr17 90306798 90306859 -4965792 + (TA)n Simple_repeat Simple_repeat 1 61 0 3 1273 395 344 123 0 chr17 90306882 90307004 -4965647 - RSINE1 SINE B4 -2 163 27 3 1273 349 287 16 0 chr17 90307255 90307384 -4965267 - L1M2 LINE L1 -4241 2608 2478 3 1273 824 135 210 5 chr17 90307610 90307796 -4964855 + Lx2A LINE L1 6123 6346 -662 3 1273 22 0 0 0 chr17 90307796 90307818 -4964833 + AT_rich Low_complexity Low_complexity 1 22 0 3 1274 4243 139 24 0 chr17 90309782 90310443 -4962208 + Lx2A1 LINE L1 6331 7007 -1 3 1274 269 144 5 5 chr17 90310585 90310653 -4961998 - L1M2 LINE L1 -4814 2035 1968 3 1274 388 367 0 7 chr17 90311177 90311317 -4961334 + L2a LINE L2 3288 3426 0 3 1274 395 331 81 6 chr17 90312599 90312760 -4959891 - MER58A DNA MER1_type -11 213 41 3 1274 29 47 0 0 chr17 90312805 90312848 -4959803 + AT_rich Low_complexity Low_complexity 1 43 0 3 1274 22 0 0 0 chr17 90312868 90312890 -4959761 + AT_rich Low_complexity Low_complexity 1 22 0 3 1274 6220 115 29 29 chr17 90312929 90314267 -4958384 - L1_Mus4 LINE L1 -1 6635 5293 3 1274 1069 112 0 0 chr17 90314267 90314410 -4958241 - B1_Mus1 SINE Alu -5 143 1 3 1274 3393 162 0 21 chr17 90314410 90314445 -4958206 - L1_Mus4 LINE L1 -591 5292 5267 3 1274 4420 172 29 15 chr17 90314447 90315354 -4957297 + L1_Mus4 LINE L1 4321 5239 -644 3 1274 1544 163 46 36 chr17 90315357 90315663 -4956988 - RLTR27 LTR ERVK 0 309 1 3 1274 301 320 62 88 chr17 90315761 90315987 -4956664 + RMER12 LTR ERVK 1101 1320 -2 3 1274 255 276 38 50 chr17 90317314 90317394 -4955257 + ID4_ SINE ID 1 79 -4 3 1274 21 36 0 0 chr17 90318175 90318203 -4954448 + AT_rich Low_complexity Low_complexity 1 28 0 3 1274 216 349 78 7 chr17 90318728 90318900 -4953751 - MIRb SINE MIR -43 225 33 3 1274 2157 178 63 17 chr17 90319410 90319873 -4952778 + MYSERV6-int LTR ERVK 1106 1589 -7370 3 1274 2734 181 9 22 chr17 90319877 90320459 -4952192 + MYSERV6-int LTR ERVK 1715 2288 -6671 3 1274 303 23 0 0 chr17 90320464 90320508 -4952143 + MYSERV6-int LTR ERVK 2813 2856 -2404 3 1274 4449 201 93 31 chr17 90320508 90321809 -4950842 + MusHAL1 LINE L1 281 1666 -1046 3 1274 213 39 0 0 chr17 90321809 90321835 -4950816 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 3 1274 4449 201 93 31 chr17 90321835 90321855 -4950796 + MusHAL1 LINE L1 1667 1684 -1028 3 1274 252 0 0 0 chr17 90321855 90321883 -4950768 + (GAAA)n Simple_repeat Simple_repeat 1 28 0 3 1274 658 109 18 0 chr17 90321883 90321993 -4950658 + (GGGA)n Simple_repeat Simple_repeat 3 114 0 3 1274 482 170 9 0 chr17 90321993 90322099 -4950552 + L1_Mur2 LINE L1 2861 2967 -2910 3 1274 606 265 56 0 chr17 90322557 90322719 -4949932 + RMER15 LTR ERVL 403 573 -2 3 1274 3128 213 73 40 chr17 90322804 90323684 -4948967 + Lx9 LINE L1 6735 7643 -1 3 1274 6694 116 29 6 chr17 90324259 90325591 -4947060 - Lx LINE L1 0 6654 5288 3 1274 7218 87 73 4 chr17 90325598 90326965 -4945686 - L1Md_F2 LINE L1 -10 6572 4989 3 1274 354 245 68 87 chr17 90326966 90327127 -4945524 + Tigger1 DNA MER2_type 73 230 -2188 4 1274 522 250 50 0 chr17 90327313 90327473 -4945178 - Tigger1 DNA MER2_type -1879 539 372 4 1274 450 0 0 0 chr17 90327473 90327523 -4945128 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 1274 22 0 0 0 chr17 90328507 90328529 -4944122 + AT_rich Low_complexity Low_complexity 1 22 0 4 1274 439 104 21 10 chr17 90329306 90329403 -4943248 + (TCTG)n Simple_repeat Simple_repeat 1 98 0 4 1274 203 0 37 0 chr17 90329406 90329433 -4943218 + (TC)n Simple_repeat Simple_repeat 1 28 0 4 1274 336 326 10 40 chr17 90329629 90329728 -4942923 + PB1D10 SINE Alu 17 112 -5 4 1274 242 366 9 18 chr17 90330289 90330403 -4942248 + LTR85b LTR Gypsy? 661 773 -11 4 1274 1176 115 0 3 chr17 90330743 90331030 -4941621 + (TCC)n Simple_repeat Simple_repeat 1 286 0 4 1274 364 342 30 86 chr17 90332385 90332583 -4940068 - MER47B DNA MER2_type -154 264 78 4 1274 490 274 169 0 chr17 90332617 90332812 -4939839 + Lx8 LINE L1 7049 7276 -197 4 1274 23 0 0 0 chr17 90332974 90332997 -4939654 + AT_rich Low_complexity Low_complexity 1 23 0 4 1274 868 130 44 32 chr17 90333017 90333178 -4939473 - RLTR9D LTR ERVK -13 424 248 4 1274 1465 60 0 0 chr17 90333178 90333363 -4939288 + L1Md_T LINE L1 6398 6582 0 4 1274 1499 127 41 48 chr17 90333363 90333671 -4938980 - RLTR9D LTR ERVK -145 292 1 4 1274 698 309 144 10 chr17 90334229 90334527 -4938124 + RCHARR1 DNA MER1_type 3 340 -634 4 1274 424 373 13 0 chr17 90334701 90334859 -4937792 + MER5A1 DNA MER1_type 7 166 0 4 1274 2953 19 16 8 chr17 90334894 90335258 -4937393 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1274 51495 32 15 3 chr17 90335258 90341655 -4930996 + IAPEz-int LTR ERVK 8 6481 0 4 1274 2904 22 11 37 chr17 90341655 90342032 -4930619 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1274 358 247 86 0 chr17 90344017 90344110 -4928541 + B1F1 SINE Alu 15 115 -34 4 1274 215 146 0 18 chr17 90344117 90344173 -4928478 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 4 1274 775 112 184 0 chr17 90344176 90344301 -4928350 - B1_Mus1 SINE Alu 0 148 1 4 1274 213 300 28 28 chr17 90344357 90344429 -4928222 + ID4_ SINE ID 3 74 -9 4 1274 1088 242 22 18 chr17 90344573 90344846 -4927805 - Lx6 LINE L1 -5 7455 7182 4 1274 1519 267 24 5 chr17 90344843 90345265 -4927386 - Lx6 LINE L1 -995 6465 6036 4 1274 5340 163 103 22 chr17 90345265 90346155 -4926496 - RLTR22_Mur LTR ERVK -597 1251 297 4 1274 4505 85 2 0 chr17 90346155 90346754 -4925897 + L1_Mus1 LINE L1 5968 6567 0 4 1274 5340 163 103 22 chr17 90346754 90347021 -4925630 - RLTR22_Mur LTR ERVK -1552 296 2 4 1274 929 116 0 6 chr17 90347453 90347609 -4925042 + MYSERV16_I-int LTR ERVK 2 156 -2170 4 1274 1319 218 46 15 chr17 90347605 90347931 -4924720 + MYSERV16_I-int LTR ERVK 466 801 -1525 4 1274 8829 152 12 4 chr17 90347934 90349550 -4923101 - L1_Mus3 LINE L1 -368 5515 3888 4 1274 6778 103 12 20 chr17 90349549 90350642 -4922009 + L1_Mus3 LINE L1 5546 6631 -7 4 1274 1083 72 0 7 chr17 90350649 90350789 -4921862 + B1_Mus1 SINE Alu 1 139 -9 4 1274 288 0 0 0 chr17 90350789 90350821 -4921830 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 4 1274 281 235 0 0 chr17 90350839 90350907 -4921744 + MYSERV16_I-int LTR ERVK 812 879 -1447 4 1274 5857 237 77 35 chr17 90350955 90351022 -4921629 - L1_Mur2 LINE L1 -472 5405 5350 4 1274 387 0 0 0 chr17 90351022 90351065 -4921586 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 4 1274 5857 237 77 35 chr17 90351065 90351668 -4920983 - L1_Mur2 LINE L1 -528 5349 4737 4 1274 432 0 0 0 chr17 90351668 90351716 -4920935 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 1274 5857 237 77 35 chr17 90351716 90353046 -4919605 - L1_Mur2 LINE L1 -1141 4736 3322 4 1274 481 123 0 19 chr17 90353183 90353291 -4919360 + (TC)n Simple_repeat Simple_repeat 2 107 0 4 1274 710 196 36 0 chr17 90353427 90353621 -4919030 - L1_Mur2 LINE L1 -4385 1492 1292 4 1274 1125 178 20 4 chr17 90353590 90353838 -4918813 - L1_Mur2 LINE L1 -2209 3668 3417 4 1274 382 92 15 0 chr17 90353839 90353903 -4918748 - BGLII LTR ERVK -61 380 292 4 1274 1178 166 156 17 chr17 90353903 90354237 -4918414 - RMER3D-int LTR ERVK -1449 1393 1014 4 1274 1049 48 66 0 chr17 90354280 90354446 -4918205 + (TTTCC)n Simple_repeat Simple_repeat 4 180 0 4 1274 483 154 44 0 chr17 90354448 90354539 -4918112 - RMER3D-int LTR ERVK -2259 583 489 4 1274 629 189 21 32 chr17 90354672 90354858 -4917793 - RMER3D-int LTR ERVK -1991 851 668 4 1274 2848 75 55 0 chr17 90355224 90355623 -4917028 - BGLII LTR ERVK 0 421 1 4 1274 207 408 19 28 chr17 90355624 90355730 -4916921 - L2 LINE L2 -2845 574 470 4 1274 472 258 0 0 chr17 90355795 90355892 -4916759 + B3A SINE B2 1 97 -101 4 1274 2727 29 6 34 chr17 90355896 90356252 -4916399 + ORR1A0 LTR MaLR 1 346 0 4 1274 331 267 29 29 chr17 90356823 90356927 -4915724 + PB1D10 SINE Alu 2 105 -12 4 1274 202 95 0 45 chr17 90356931 90356975 -4915676 + (TAA)n Simple_repeat Simple_repeat 1 42 0 4 1274 485 235 39 66 chr17 90356993 90357175 -4915476 - RNLTR23 LTR ERVK 0 642 466 4 1274 385 221 64 96 chr17 90357492 90357510 -4915141 + MT2B LTR ERVL 143 156 -445 4 1274 681 196 86 7 chr17 90357510 90357649 -4915002 + B1_Mur4 SINE Alu 1 150 0 4 1274 438 127 0 0 chr17 90357663 90357734 -4914917 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 4 1274 183 222 0 0 chr17 90358026 90358071 -4914580 + CT-rich Low_complexity Low_complexity 2 46 0 4 1274 534 269 77 15 chr17 90358086 90358282 -4914369 + B3 SINE B2 1 208 -8 4 1274 22 56 0 0 chr17 90358333 90358369 -4914282 + AT_rich Low_complexity Low_complexity 1 36 0 4 1274 285 51 0 0 chr17 90358628 90358667 -4913984 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1274 1330 85 37 0 chr17 90358681 90358869 -4913782 + B2_Mm2 SINE B2 1 195 0 4 1274 225 355 43 86 chr17 90358910 90359027 -4913624 - LTR16E2 LTR ERVL -222 346 235 4 1274 528 180 0 0 chr17 90360352 90360513 -4912138 + (CATATA)n Simple_repeat Simple_repeat 4 164 0 4 1274 403 289 108 8 chr17 90361850 90361979 -4910672 + B1F SINE Alu 5 146 -3 4 1274 1044 94 12 17 chr17 90363174 90363347 -4909304 + (TTTCC)n Simple_repeat Simple_repeat 4 175 0 4 1274 639 0 0 0 chr17 90363348 90363419 -4909232 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 4 1274 572 243 137 41 chr17 90363574 90363735 -4908916 - Tigger7 DNA MER2_type -40 2451 2279 4 1274 561 30 0 0 chr17 90363735 90363802 -4908849 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 1274 572 243 137 41 chr17 90363802 90363910 -4908741 - Tigger7 DNA MER2_type -213 2278 2156 4 1274 702 351 27 19 chr17 90363923 90364179 -4908472 - Tigger7 DNA MER2_type -2186 305 48 4 1274 230 0 33 0 chr17 90365429 90365459 -4907192 + (CAA)n Simple_repeat Simple_repeat 3 33 0 4 1274 2094 249 72 5 chr17 90366599 90367363 -4905288 + RMER1B Other Other 51 840 -226 4 1274 517 135 57 9 chr17 90367396 90367501 -4905150 + RMER1B Other Other 946 1055 -11 4 1274 587 293 8 0 chr17 90367534 90367667 -4904984 + RSINE1 SINE B4 6 139 -26 4 1274 1042 242 82 80 chr17 90368286 90368712 -4903939 + RLTR11A LTR ERVK 1 427 -101 4 1274 1150 193 0 35 chr17 90368877 90369108 -4903543 - URR1B DNA MER1_type -2 223 1 4 1274 3465 20 5 0 chr17 90369980 90370374 -4902277 - MTA_Mm LTR MaLR 0 396 1 4 1274 279 219 36 12 chr17 90370572 90370655 -4901996 + CT-rich Low_complexity Low_complexity 3 87 0 4 1274 253 339 0 0 chr17 90370680 90370736 -4901915 - ID_B1 SINE B4 -71 153 98 4 1274 428 209 121 0 chr17 90370735 90370826 -4901825 - B1_Mur2 SINE Alu -45 104 3 4 1274 267 276 68 77 chr17 90370826 90370892 -4901759 - MT2B LTR ERVL -327 257 97 4 1274 1745 52 0 9 chr17 90371460 90371692 -4900959 - L1Md_F2 LINE L1 0 6582 6353 4 1274 186 71 0 0 chr17 90371769 90371797 -4900854 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1274 416 104 15 0 chr17 90372788 90372855 -4899796 + (TC)n Simple_repeat Simple_repeat 1 68 0 4 1274 919 261 9 0 chr17 90374288 90374499 -4898152 + B3 SINE B2 1 213 -3 4 1274 286 127 0 137 chr17 90374788 90374861 -4897790 - MT2B2 LTR ERVL -8 593 531 4 1274 245 159 24 24 chr17 90374880 90374964 -4897687 + (TA)n Simple_repeat Simple_repeat 1 84 0 4 1274 391 167 103 0 chr17 90374971 90375049 -4897602 - ORR1C2 LTR MaLR -298 86 1 4 1274 1300 214 187 77 chr17 90375207 90375677 -4896974 - MT2B2 LTR ERVL -62 522 1 4 1274 1950 95 83 14 chr17 90375784 90376073 -4896578 + RLTR27 LTR ERVK 1 309 0 4 1274 1684 205 61 8 chr17 90376582 90376941 -4895710 + ORR1C1 LTR MaLR 1 378 0 4 1274 32 0 0 0 chr17 90377293 90377325 -4895326 + AT_rich Low_complexity Low_complexity 1 32 0 4 1274 34 55 0 0 chr17 90377594 90377649 -4895002 + AT_rich Low_complexity Low_complexity 1 55 0 4 1274 423 0 0 0 chr17 90379785 90379832 -4892819 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1274 453 310 113 5 chr17 90380176 90380361 -4892290 + B3 SINE B2 7 211 -5 4 1274 497 144 11 0 chr17 90380361 90380451 -4892200 + G-rich Low_complexity Low_complexity 2 92 0 4 1274 239 279 49 37 chr17 90381034 90381116 -4891535 - RMER21B LTR ERV1 -112 835 753 4 1274 670 285 169 23 chr17 90381134 90381400 -4891251 - RMER21B LTR ERV1 -279 563 259 4 1274 346 260 153 27 chr17 90381926 90382076 -4890575 - MTEb LTR MaLR -15 364 196 4 1274 25 31 0 0 chr17 90383225 90383257 -4889394 + AT_rich Low_complexity Low_complexity 1 32 0 4 1274 27 62 0 0 chr17 90383291 90383339 -4889312 + AT_rich Low_complexity Low_complexity 1 48 0 4 1274 660 26 0 0 chr17 90384467 90384545 -4888106 + (GA)n Simple_repeat Simple_repeat 2 79 0 4 1274 1163 70 0 9 chr17 90385418 90385646 -4887005 + (TC)n Simple_repeat Simple_repeat 1 226 0 4 1274 1727 164 38 28 chr17 90386978 90387298 -4885353 - Lx2B LINE L1 -4 6996 6674 4 1274 225 0 0 0 chr17 90387389 90387414 -4885237 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 1274 209 372 78 7 chr17 90387480 90387634 -4885017 + MIRb SINE MIR 64 228 -40 4 1274 622 282 54 58 chr17 90387637 90388017 -4884634 + MT2B2 LTR ERVL 1 485 -99 4 1274 354 134 0 0 chr17 90388029 90388096 -4884555 + (GA)n Simple_repeat Simple_repeat 1 67 0 4 1274 2470 115 85 7 chr17 90388108 90388520 -4884131 + BGLII_A LTR ERVK 2 445 0 4 1274 202 139 23 0 chr17 90389057 90389100 -4883551 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 4 1274 333 305 1 42 chr17 90389739 90389858 -4882793 - PB1D10 SINE Alu -3 114 2 4 1274 270 286 21 52 chr17 90390784 90390880 -4881771 + PB1D10 SINE Alu 2 94 -23 4 1274 444 51 0 0 chr17 90391264 90391323 -4881328 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1274 354 68 40 27 chr17 90391657 90391732 -4880919 + (CAGAGA)n Simple_repeat Simple_repeat 3 78 0 4 1274 1332 190 0 0 chr17 90392563 90392784 -4879867 + Lx5 LINE L1 608 828 -5829 4 1274 3241 127 26 4 chr17 90392791 90393298 -4879353 - Lx LINE L1 -355 6299 5782 5 1274 258 95 0 0 chr17 90393298 90393340 -4879311 + (T)n Simple_repeat Simple_repeat 1 42 0 5 1274 1031 53 0 0 chr17 90393340 90393473 -4879178 - B1_Mus2 SINE Alu 0 147 15 5 1274 1374 42 0 0 chr17 90393473 90393641 -4879010 - L1_Mus4 LINE L1 -845 5791 5624 5 1274 3003 183 0 4 chr17 90393639 90394137 -4878514 - L1VL4 LINE L1 -5806 496 1 5 1274 8244 46 0 1 chr17 90394311 90395566 -4877085 - L1Md_F2 LINE L1 -2 6580 5328 5 1274 258 316 57 53 chr17 90396395 90396683 -4875968 + MER57C2 LTR ERV1 61 383 -28 5 1274 3714 274 115 18 chr17 90396772 90397099 -4875552 + Lx5 LINE L1 829 1270 -6458 4 1274 419 92 15 0 chr17 90397099 90397164 -4875487 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 1274 3714 205 79 67 chr17 90397164 90397969 -4874682 + Lx5 LINE L1 1271 2058 -3819 4 1274 471 35 0 0 chr17 90397969 90398026 -4874625 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1274 3714 205 79 67 chr17 90398026 90398360 -4874291 + Lx5 LINE L1 2059 2407 -3470 4 1274 1423 182 23 4 chr17 90398395 90398660 -4873991 + L1_Mur1 LINE L1 5489 5758 -128 5 1274 8801 175 52 9 chr17 90398667 90401449 -4871202 + Lx5 LINE L1 4135 7047 -3 4 1274 336 24 0 0 chr17 90402558 90402599 -4870052 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 5 1274 529 257 92 105 chr17 90402619 90403001 -4869650 + L1M1 LINE L1 5327 5703 -597 5 1274 201 39 0 0 chr17 90403001 90403027 -4869624 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 5 1274 1024 91 28 7 chr17 90403027 90403171 -4869480 - B1_Mus1 SINE Alu -1 147 1 5 1274 370 159 29 0 chr17 90403261 90403330 -4869321 + B1_Mus2 SINE Alu 77 147 0 5 1274 255 308 49 41 chr17 90403346 90403530 -4869121 - MER44A DNA MER2_type -148 191 7 5 1274 1105 80 0 0 chr17 90404443 90404581 -4868070 + B1_Mus2 SINE Alu 1 138 -9 5 1274 1552 49 137 292 chr17 90405621 90406053 -4866598 + RLTR10B2 LTR ERVK 1 365 0 5 1274 414 0 0 0 chr17 90406186 90406232 -4866419 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1274 315 322 11 44 chr17 90408253 90408435 -4864216 + GA-rich Low_complexity Low_complexity 3 178 0 5 1274 231 294 27 27 chr17 90409170 90409282 -4863369 + CT-rich Low_complexity Low_complexity 5 116 0 5 1274 306 0 0 0 chr17 90409491 90409525 -4863126 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1274 1839 229 20 51 chr17 90409852 90410358 -4862293 + RMER13B LTR ERVK 391 880 -28 5 1274 1672 243 65 5 chr17 90410376 90410744 -4861907 - MTC LTR MaLR -31 390 1 5 1274 663 179 0 0 chr17 90410745 90410851 -4861800 - L1_Mur3 LINE L1 -270 5610 5505 5 1274 2742 147 31 21 chr17 90410852 90411062 -4861589 - LTRIS4 LTR ERV1 0 507 303 5 1274 351 0 0 0 chr17 90411062 90411101 -4861550 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1274 2742 147 31 21 chr17 90411101 90411369 -4861282 - LTRIS4 LTR ERV1 -205 302 26 5 1274 2270 166 40 11 chr17 90411384 90411829 -4860822 - L1_Mur3 LINE L1 -367 5513 5056 5 1274 320 112 44 11 chr17 90411838 90411928 -4860723 + (TTTG)n Simple_repeat Simple_repeat 1 93 0 5 1274 595 124 124 0 chr17 90411937 90412050 -4860601 - L1_Mur3 LINE L1 -2314 3566 3440 5 1274 4748 172 63 23 chr17 90412612 90412689 -4859962 - RLTR25A LTR ERVK -61 1042 960 5 1274 576 0 0 0 chr17 90412689 90412753 -4859898 + (TC)n Simple_repeat Simple_repeat 1 64 0 5 1274 4748 172 63 23 chr17 90412753 90413225 -4859426 - RLTR25A LTR ERVK -144 959 454 5 1274 2056 142 3 24 chr17 90413225 90413558 -4859093 - ORR1A2 LTR MaLR 0 327 2 5 1274 4748 172 63 23 chr17 90413558 90413973 -4858678 - RLTR25A LTR ERVK -650 453 38 5 1274 889 280 114 0 chr17 90414000 90414236 -4858415 - Lx5 LINE L1 -214 6836 6574 5 1274 266 291 0 0 chr17 90414247 90414302 -4858349 - RLTR22_Mur LTR ERVK -2 1320 1266 5 1274 327 162 164 27 chr17 90414329 90414471 -4858180 - B2_Mm2 SINE B2 -1 194 17 5 1274 559 174 69 9 chr17 90414607 90414723 -4857928 + BGLII_B LTR ERVK 1 123 -318 5 1274 646 122 103 0 chr17 90414761 90414868 -4857783 - B2_Mm2 SINE B2 -77 118 1 5 1274 2799 209 96 39 chr17 90414881 90415207 -4857444 - RLTR22_Mur LTR ERVK -175 1673 1427 5 1274 432 0 0 0 chr17 90415207 90415255 -4857396 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1274 2799 188 76 38 chr17 90415255 90415640 -4857011 - RLTR22_Mur LTR ERVK -422 1426 1016 5 1274 960 70 0 0 chr17 90415774 90415916 -4856735 + (TC)n Simple_repeat Simple_repeat 1 142 0 5 1274 556 184 70 9 chr17 90415953 90416068 -4856583 + BGLII_B LTR ERVK 1 122 -319 5 1274 1311 94 0 11 chr17 90416300 90416483 -4856168 - B2_Mm2 SINE B2 -14 181 1 5 1274 36 0 0 0 chr17 90416528 90416564 -4856087 + AT_rich Low_complexity Low_complexity 1 36 0 5 1274 1664 210 27 82 chr17 90416565 90416682 -4855969 - RLTR22_Mur LTR ERVK -1099 749 654 5 1274 981 120 0 0 chr17 90416682 90416824 -4855827 + B1_Mm SINE Alu 2 143 -4 5 1274 228 86 0 0 chr17 90416825 90416860 -4855791 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 5 1274 1664 210 27 82 chr17 90416860 90417217 -4855434 - RLTR22_Mur LTR ERVK -1195 653 299 5 1274 2218 239 72 67 chr17 90417230 90418212 -4854439 - RMER17B LTR ERVK -10 898 1 5 1274 774 217 20 25 chr17 90418212 90418420 -4854231 - RLTR22_Mur LTR ERVK -1544 304 103 5 1274 23686 128 11 63 chr17 90418420 90422706 -4849945 + MusHAL1 LINE L1 844 4957 -926 5 1274 229 226 15 61 chr17 90422706 90422772 -4849879 - RMER20A LTR ERVK -268 248 186 5 1274 23686 128 11 63 chr17 90422772 90423295 -4849356 + MusHAL1 LINE L1 4958 5460 -423 5 1274 36147 47 1 31 chr17 90423295 90427871 -4844780 + L1_Mus2 LINE L1 917 5589 -297 5 1274 9005 4 0 0 chr17 90427871 90428867 -4843784 + L1Md_T LINE L1 5587 6582 0 5 1274 36147 70 3 33 chr17 90428867 90430015 -4842636 + L1_Mus2 LINE L1 5590 6560 -9 5 1274 189 0 0 0 chr17 90430020 90430041 -4842610 + (GAAA)n Simple_repeat Simple_repeat 4 24 0 5 1274 207 277 0 0 chr17 90430041 90430106 -4842545 + G-rich Low_complexity Low_complexity 6 70 0 5 1274 861 180 0 0 chr17 90430101 90430268 -4842383 + GA-rich Low_complexity Low_complexity 1 167 0 5 1274 1145 108 0 6 chr17 90430274 90430451 -4842200 + (GAAAA)n Simple_repeat Simple_repeat 3 178 0 5 1274 410 176 36 73 chr17 90430451 90430554 -4842097 - RLTR14 LTR ERV1 -57 325 225 5 1274 232 213 0 0 chr17 90431107 90431154 -4841497 - Lx9 LINE L1 -308 7336 7290 5 1274 269 64 0 41 chr17 90431379 90431428 -4841223 + (TTG)n Simple_repeat Simple_repeat 2 48 0 5 1274 854 284 54 84 chr17 90431949 90432283 -4840368 + MTE2a LTR MaLR 36 359 -20 5 1274 426 69 0 0 chr17 90435064 90435122 -4837529 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 1274 273 119 0 0 chr17 90435775 90435817 -4836834 + (A)n Simple_repeat Simple_repeat 1 42 0 5 1274 222 231 0 0 chr17 90436174 90436239 -4836412 + T-rich Low_complexity Low_complexity 1 65 0 5 1274 327 25 0 0 chr17 90437232 90437272 -4835379 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1274 396 336 18 0 chr17 90438285 90438398 -4834253 + RSINE1 SINE B4 25 139 -26 5 1274 515 16 0 15 chr17 90438398 90438463 -4834188 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 1274 23 0 0 0 chr17 90439480 90439503 -4833148 + AT_rich Low_complexity Low_complexity 1 23 0 5 1275 376 277 0 21 chr17 90440225 90440321 -4832330 + B1_Mur4 SINE Alu 1 94 -56 5 1275 315 0 0 0 chr17 90440327 90440362 -4832289 + (ATG)n Simple_repeat Simple_repeat 2 36 0 5 1275 901 90 0 0 chr17 90441232 90441354 -4831297 + B1_Mm SINE Alu 1 122 -25 5 1275 554 224 12 8 chr17 90442047 90442186 -4830465 + B1_Mur1 SINE Alu 3 149 0 5 1275 510 342 72 10 chr17 90442525 90442720 -4829931 - ID_B1 SINE B4 0 224 18 5 1275 1573 166 65 31 chr17 90442795 90443233 -4829418 + RMER17C LTR ERVK 16 439 -519 5 1275 242 298 12 23 chr17 90443414 90443500 -4829151 - Lx8 LINE L1 -616 6857 6773 5 1275 24 32 0 0 chr17 90443649 90443680 -4828971 + AT_rich Low_complexity Low_complexity 1 31 0 5 1275 184 312 36 36 chr17 90444541 90444624 -4828027 + MIRm SINE MIR 94 176 -100 5 1275 392 178 0 9 chr17 90446652 90446760 -4825891 + (TG)n Simple_repeat Simple_repeat 2 108 0 5 1275 439 191 45 0 chr17 90446785 90446874 -4825777 - B1F1 SINE Alu -36 113 21 5 1275 387 295 90 45 chr17 90446900 90447056 -4825595 + RSINE1 SINE B4 3 165 0 5 1275 207 312 98 52 chr17 90449755 90449972 -4822679 - MIRb SINE MIR -3 259 41 5 1275 22 35 0 0 chr17 90450042 90450071 -4822580 + AT_rich Low_complexity Low_complexity 1 29 0 5 1275 235 244 52 62 chr17 90450883 90450979 -4821672 - ID_B1 SINE B4 -1 223 129 5 1275 563 286 82 86 chr17 90451109 90451589 -4821062 + MER67C LTR ERV1 20 477 -37 5 1275 276 30 0 0 chr17 90452877 90452910 -4819741 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 1275 507 93 0 0 chr17 90453460 90453535 -4819116 + L1_Mus2 LINE L1 6492 6566 0 5 1275 189 154 0 0 chr17 90453594 90453633 -4819018 + T-rich Low_complexity Low_complexity 1 39 0 5 1275 192 152 0 0 chr17 90454143 90454176 -4818475 + A-rich Low_complexity Low_complexity 1 33 0 5 1275 558 0 0 0 chr17 90454349 90454411 -4818240 + (GA)n Simple_repeat Simple_repeat 1 62 0 5 1275 353 272 0 11 chr17 90455589 90455682 -4816969 + B4A SINE B4 1 92 -200 5 1275 384 308 0 0 chr17 90455694 90455785 -4816866 + B1_Mur2 SINE Alu 3 93 -56 5 1275 420 143 0 0 chr17 90455788 90455858 -4816793 + (TATG)n Simple_repeat Simple_repeat 2 71 0 5 1275 554 281 20 89 chr17 90455896 90456099 -4816552 + B4A SINE B4 104 292 0 5 1275 414 306 74 7 chr17 90456441 90456589 -4816062 + B3A SINE B2 19 176 -22 5 1275 288 77 0 0 chr17 90457104 90457143 -4815508 + (ATGGTG)n Simple_repeat Simple_repeat 4 42 0 5 1275 423 0 0 0 chr17 90457547 90457594 -4815057 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 1275 844 175 21 0 chr17 90458265 90458408 -4814243 - B1_Mur4 SINE Alu 0 150 5 5 1275 27 0 0 0 chr17 90460120 90460147 -4812504 + AT_rich Low_complexity Low_complexity 1 27 0 5 1275 423 0 0 0 chr17 90462193 90462240 -4810411 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1275 378 0 0 0 chr17 90462240 90462281 -4810370 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 1275 1333 186 0 13 chr17 90464256 90464485 -4808166 + URR1A DNA MER1_type 1 226 0 5 1275 211 284 136 10 chr17 90464707 90464810 -4807841 + PB1D10 SINE Alu 1 116 -1 5 1275 225 217 0 0 chr17 90464939 90464985 -4807666 + MT2A LTR ERVL 8 53 -480 5 1275 249 128 0 0 chr17 90465490 90465537 -4807114 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 5 1275 23 33 0 0 chr17 90465940 90465970 -4806681 + AT_rich Low_complexity Low_complexity 1 30 0 5 1275 7125 134 17 10 chr17 90467091 90468811 -4803840 + Lx LINE L1 4912 6642 -12 5 1275 567 257 94 23 chr17 90469052 90469250 -4803401 - B3 SINE B2 0 198 1 6 1275 396 0 0 0 chr17 90469485 90469529 -4803122 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 1275 1018 101 0 45 chr17 90469609 90469623 -4803028 - B1_Mus1 SINE Alu 0 148 139 6 1275 207 0 0 0 chr17 90469623 90469646 -4803005 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1275 1018 101 0 45 chr17 90469646 90469786 -4802865 - B1_Mus1 SINE Alu -10 138 1 6 1275 567 0 0 0 chr17 90469899 90469962 -4802689 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 1275 348 312 66 58 chr17 90470154 90470367 -4802284 + MIRb SINE MIR 21 234 -34 6 1275 437 316 94 75 chr17 90471515 90471727 -4800924 - B4A SINE B4 0 292 77 6 1275 588 306 59 5 chr17 90472097 90472284 -4800367 - B3A SINE B2 -1 197 1 6 1275 537 16 0 0 chr17 90473381 90473443 -4799208 + (TCTA)n Simple_repeat Simple_repeat 3 64 0 6 1275 243 0 0 0 chr17 90474324 90474351 -4798300 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1275 216 0 0 0 chr17 90477591 90477615 -4795036 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1275 439 116 0 55 chr17 90478756 90478847 -4793804 + L1Md_F2 LINE L1 6496 6581 -1 6 1275 228 35 0 0 chr17 90479443 90479472 -4793179 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 6 1275 650 222 44 0 chr17 90479721 90479856 -4792795 - B1_Mus2 SINE Alu -2 145 5 6 1275 864 226 106 32 chr17 90480238 90480568 -4792083 + MTC LTR MaLR 24 416 -5 6 1275 1051 93 0 0 chr17 90482647 90482787 -4789864 + B1_Mus1 SINE Alu 1 140 -8 6 1275 975 208 22 27 chr17 90483507 90483729 -4788922 + URR1A DNA MER1_type 1 221 -5 6 1275 577 235 200 6 chr17 90484167 90484347 -4788304 + B3 SINE B2 2 216 0 6 1275 195 42 0 0 chr17 90486060 90486084 -4786567 + (CAA)n Simple_repeat Simple_repeat 2 25 0 6 1275 589 106 9 9 chr17 90486541 90486646 -4786005 + (CA)n Simple_repeat Simple_repeat 2 106 0 6 1275 324 0 0 0 chr17 90487123 90487159 -4785492 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 1275 351 0 0 0 chr17 90488539 90488578 -4784073 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1275 495 45 0 0 chr17 90488769 90488835 -4783816 + (CA)n Simple_repeat Simple_repeat 1 66 0 6 1275 375 270 234 0 chr17 90490487 90490598 -4782053 + RSINE1 SINE B4 9 145 -20 6 1275 407 319 8 16 chr17 90490924 90491045 -4781606 - B1F SINE Alu -29 120 1 6 1275 777 264 64 23 chr17 90491543 90491807 -4780844 - B4A SINE B4 -16 276 2 6 1275 438 191 113 0 chr17 90491852 90491967 -4780684 + Lx9 LINE L1 7441 7568 -76 6 1275 21 82 0 0 chr17 90491970 90492019 -4780632 + AT_rich Low_complexity Low_complexity 1 49 0 6 1275 513 0 0 0 chr17 90492346 90492403 -4780248 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 1275 598 296 6 41 chr17 90492405 90492574 -4780077 - RSINE1 SINE B4 0 165 3 6 1275 206 174 0 21 chr17 90495779 90495826 -4776825 + GA-rich Low_complexity Low_complexity 3 48 0 6 1275 207 396 26 13 chr17 90496106 90496262 -4776389 + MIRb SINE MIR 100 257 -11 6 1275 354 195 0 0 chr17 90496271 90496353 -4776298 + (CA)n Simple_repeat Simple_repeat 2 83 0 6 1275 350 305 87 43 chr17 90496353 90496514 -4776137 + HAL1-3A_ME LINE L1 1976 2143 -715 6 1275 279 0 0 0 chr17 90497449 90497480 -4775171 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1275 1048 286 106 30 chr17 90497500 90498092 -4774559 + L1MC LINE L1 4753 5389 -757 6 1275 3439 61 0 0 chr17 90498091 90498516 -4774135 - L1_Mus1 LINE L1 -22 6545 6121 6 1275 683 267 77 34 chr17 90498518 90498816 -4773835 + L1MC LINE L1 5385 5695 -638 6 1275 432 0 0 0 chr17 90499053 90499101 -4773550 + (TA)n Simple_repeat Simple_repeat 2 49 0 6 1275 208 143 0 0 chr17 90500652 90500687 -4771964 + (A)n Simple_repeat Simple_repeat 1 35 0 1 1275 381 387 18 32 chr17 90500766 90500985 -4771666 + MLT1D LTR MaLR 1 216 -289 2 1275 342 0 0 0 chr17 90500985 90501023 -4771628 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 1275 362 243 247 29 chr17 90501292 90501466 -4771185 - B3 SINE B2 -3 213 2 4 1275 2347 42 0 3 chr17 90501483 90501769 -4770882 - L1Md_F2 LINE L1 -12 6572 6288 5 1275 2303 97 3 9 chr17 90501771 90502105 -4770546 + IAPLTR1a_Mm LTR ERVK 1 332 -5 6 1275 54611 24 16 11 chr17 90502105 90508546 -4764105 + IAPEz-int LTR ERVK 6 6479 -2 6 1275 2297 100 3 9 chr17 90508548 90508882 -4763769 + IAPLTR1a_Mm LTR ERVK 1 332 -5 6 1275 3486 38 2 0 chr17 90508884 90509301 -4763350 - L1Md_F2 LINE L1 -290 6292 5875 5 1275 8161 53 0 2 chr17 90509301 90510352 -4762299 + L1_Mm LINE L1 1910 2958 -2925 7 1275 513 0 0 0 chr17 90510807 90510864 -4761787 + (TC)n Simple_repeat Simple_repeat 1 57 0 8 1275 337 292 77 117 chr17 90511467 90511715 -4760936 - Tigger15a DNA TcMar -60 655 418 9 1275 828 287 43 40 chr17 90511717 90512091 -4760560 - MTEa LTR MaLR -4 375 1 1 1275 1211 120 11 0 chr17 90512272 90512455 -4760196 + B2_Mm1t SINE B2 1 185 -8 1 1275 221 354 176 20 chr17 90514446 90514645 -4758006 + MIRb SINE MIR 39 268 0 1 1275 205 257 76 0 chr17 90514896 90514971 -4757680 + MIRc SINE MIR 95 180 -96 1 1275 280 284 49 0 chr17 90516598 90516700 -4755951 + Lx7 LINE L1 7590 7696 0 1 1275 242 194 16 0 chr17 90518946 90519008 -4753643 + CT-rich Low_complexity Low_complexity 2 64 0 1 1275 310 239 28 0 chr17 90519278 90519349 -4753302 + B4A SINE B4 24 96 -196 1 1275 2121 103 3 0 chr17 90519351 90519643 -4753008 + Lx2B LINE L1 6308 6600 -400 1 1275 435 68 0 0 chr17 90519643 90519702 -4752949 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1275 252 321 89 27 chr17 90519703 90519815 -4752836 - RSINE1 SINE B4 -46 119 1 1 1275 387 383 7 0 chr17 90520783 90520932 -4751719 - RSINE1 SINE B4 -14 151 2 2 1275 584 239 7 61 chr17 90521153 90521300 -4751351 - B1_Mur1 SINE Alu -1 148 10 2 1275 292 286 40 150 chr17 90521300 90521325 -4751326 - B4 SINE B4 -67 224 72 2 1275 396 0 0 0 chr17 90522314 90522358 -4750293 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1275 642 26 0 0 chr17 90523982 90524058 -4748593 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 2 1275 228 86 0 0 chr17 90524061 90524096 -4748555 + (GA)n Simple_repeat Simple_repeat 2 36 0 2 1275 523 276 22 7 chr17 90524244 90524379 -4748272 - B1_Mur2 SINE Alu -8 141 5 2 1275 369 279 103 30 chr17 90525370 90525573 -4747078 - MER20 DNA MER1_type -1 218 1 2 1275 203 105 0 50 chr17 90525576 90525616 -4747035 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 2 1275 654 216 36 0 chr17 90525616 90525755 -4746896 - B1_Mur3 SINE Alu -1 148 5 2 1275 1077 70 14 0 chr17 90526426 90526569 -4746082 + B1_Mus2 SINE Alu 1 145 -2 3 1275 209 57 0 28 chr17 90526569 90526605 -4746046 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1275 771 221 0 7 chr17 90526649 90526795 -4745856 + B1_Mus1 SINE Alu 2 146 -2 3 1275 823 287 73 47 chr17 90526933 90527357 -4745294 + L1_Rod LINE L1 5413 5847 0 3 1275 1340 74 11 0 chr17 90527612 90527788 -4744863 + B2_Mm1t SINE B2 2 179 -14 3 1275 27 49 0 0 chr17 90528450 90528491 -4744160 + AT_rich Low_complexity Low_complexity 1 41 0 3 1275 249 33 0 0 chr17 90530090 90530120 -4742531 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1275 380 20 20 0 chr17 90530884 90530933 -4741718 + (TATG)n Simple_repeat Simple_repeat 2 51 0 3 1275 293 208 14 0 chr17 90531105 90531177 -4741474 + (TATATG)n Simple_repeat Simple_repeat 6 78 0 3 1275 783 83 0 0 chr17 90531186 90531307 -4741344 + (CA)n Simple_repeat Simple_repeat 2 122 0 3 1275 294 125 0 0 chr17 90532091 90532139 -4740512 + (TAA)n Simple_repeat Simple_repeat 2 49 0 4 1275 263 306 0 20 chr17 90532595 90532695 -4739956 + (CA)n Simple_repeat Simple_repeat 2 99 0 4 1275 371 73 0 18 chr17 90532914 90532970 -4739681 + (TTTTG)n Simple_repeat Simple_repeat 1 55 0 4 1275 1031 63 0 53 chr17 90532970 90533121 -4739530 - B1_Mus1 SINE Alu 0 148 6 4 1275 555 273 40 109 chr17 90533346 90533535 -4739116 - ID_B1 SINE B4 -24 200 3 4 1275 1283 217 17 67 chr17 90534227 90534572 -4738079 + Lx7 LINE L1 7369 7696 0 4 1275 306 67 0 0 chr17 90536684 90536729 -4735922 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 1275 4013 109 3 7 chr17 90537965 90538556 -4734095 - L1_Mus4 LINE L1 -6 6630 6042 4 1275 937 261 83 46 chr17 90539452 90539777 -4732874 + MLT1A0 LTR MaLR 1 337 -28 4 1275 594 0 0 0 chr17 90539820 90539886 -4732765 + (TC)n Simple_repeat Simple_repeat 1 66 0 4 1275 405 0 0 0 chr17 90539886 90539930 -4732721 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1275 636 38 0 0 chr17 90540476 90540555 -4732096 + (GA)n Simple_repeat Simple_repeat 2 80 0 5 1275 266 390 48 7 chr17 90541274 90541421 -4731230 + MLT1F2 LTR MaLR 200 352 -22 5 1275 281 151 31 31 chr17 90542939 90543035 -4729616 + (TATAA)n Simple_repeat Simple_repeat 5 100 0 5 1275 547 216 17 0 chr17 90543141 90543317 -4729334 + (TATG)n Simple_repeat Simple_repeat 2 180 0 5 1275 1654 170 12 59 chr17 90544896 90545234 -4727417 + ORR1A2 LTR MaLR 1 322 -5 5 1275 408 367 58 12 chr17 90545293 90545464 -4727187 + MLT1F2 LTR MaLR 381 559 -1 5 1275 21 0 0 0 chr17 90546333 90546354 -4726297 + AT_rich Low_complexity Low_complexity 1 21 0 5 1275 23 0 0 0 chr17 90548280 90548303 -4724348 + AT_rich Low_complexity Low_complexity 1 23 0 5 1275 2319 221 11 11 chr17 90549015 90549472 -4723179 - Lx LINE L1 -47 6607 6151 5 1275 7271 150 6 3 chr17 90549470 90551054 -4721597 + Lx LINE L1 4567 6156 -498 5 1275 15172 139 10 16 chr17 90551794 90553746 -4718905 + L1_Mus1 LINE L1 3339 5298 -585 5 1275 1098 75 7 7 chr17 90553746 90553893 -4718758 + B1_Mus1 SINE Alu 2 148 0 6 1275 15172 123 19 8 chr17 90553893 90554538 -4718113 + L1_Mus1 LINE L1 5299 5920 -647 5 1275 26 0 0 0 chr17 90554591 90554617 -4718034 + AT_rich Low_complexity Low_complexity 1 26 0 6 1275 507 309 154 15 chr17 90554937 90555210 -4717441 - Lx8 LINE L1 -1 7472 7162 6 1275 299 25 25 0 chr17 90556461 90556501 -4716150 + (CAGA)n Simple_repeat Simple_repeat 4 44 0 6 1275 273 333 56 36 chr17 90557099 90557295 -4715356 + L2a LINE L2 3223 3422 -4 6 1275 23 0 0 0 chr17 90557833 90557856 -4714795 + AT_rich Low_complexity Low_complexity 1 23 0 6 1275 21 36 0 0 chr17 90559118 90559146 -4713505 + AT_rich Low_complexity Low_complexity 1 28 0 6 1275 21 36 0 0 chr17 90560138 90560166 -4712485 + AT_rich Low_complexity Low_complexity 1 28 0 6 1275 603 40 0 0 chr17 90561146 90561220 -4711431 + (TCCC)n Simple_repeat Simple_repeat 3 76 0 6 1275 279 0 0 0 chr17 90561220 90561251 -4711400 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 6 1275 22 0 0 0 chr17 90563932 90563954 -4708697 + AT_rich Low_complexity Low_complexity 1 22 0 7 1275 21 0 0 0 chr17 90564232 90564253 -4708398 + AT_rich Low_complexity Low_complexity 1 21 0 7 1275 342 115 0 0 chr17 90565519 90565580 -4707071 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 1275 215 302 0 0 chr17 90565893 90565956 -4706695 + (TATATG)n Simple_repeat Simple_repeat 2 64 0 7 1275 300 53 0 0 chr17 90567345 90567383 -4705268 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 7 1275 24 32 0 0 chr17 90568000 90568031 -4704620 + AT_rich Low_complexity Low_complexity 1 31 0 7 1275 329 270 0 9 chr17 90569062 90569174 -4703477 + T-rich Low_complexity Low_complexity 4 114 0 7 1275 21 36 0 0 chr17 90569474 90569502 -4703149 + AT_rich Low_complexity Low_complexity 1 28 0 7 1275 1382 266 53 37 chr17 90569536 90569973 -4702678 + Lx9 LINE L1 6706 7149 -495 7 1275 1848 212 16 16 chr17 90569973 90570342 -4702309 + ORR1D1 LTR MaLR 1 369 -5 7 1275 1001 248 122 7 chr17 90570346 90570650 -4702001 + Lx9 LINE L1 7144 7482 -162 7 1276 348 43 0 0 chr17 90571828 90571874 -4700777 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 1276 1482 0 13 5 chr17 90572033 90572419 -4700232 + (TTC)n Simple_repeat Simple_repeat 1 389 0 8 1276 240 163 0 0 chr17 90572420 90572463 -4700188 + CT-rich Low_complexity Low_complexity 2 44 0 8 1276 343 212 26 7 chr17 90572954 90573106 -4699545 + (CA)n Simple_repeat Simple_repeat 2 156 0 8 1276 334 244 15 0 chr17 90573140 90573275 -4699376 + (CA)n Simple_repeat Simple_repeat 1 137 0 8 1276 668 314 31 5 chr17 90573493 90573685 -4698966 + B3 SINE B2 18 214 -2 8 1276 1034 118 0 0 chr17 90573780 90573924 -4698727 - B1_Mus2 SINE Alu -2 145 2 8 1276 391 350 68 14 chr17 90573926 90574146 -4698505 + MLT1B LTR MaLR 151 382 -8 8 1276 294 242 92 23 chr17 90575768 90575899 -4696752 - Lx9 LINE L1 -48 7596 7457 8 1276 22 70 0 0 chr17 90576753 90576796 -4695855 + AT_rich Low_complexity Low_complexity 1 43 0 8 1276 300 27 0 0 chr17 90577538 90577575 -4695076 + (GTTTG)n Simple_repeat Simple_repeat 4 40 0 8 1276 284 308 17 93 chr17 90577575 90577684 -4694967 - PB1D10 SINE Alu -8 109 9 9 1276 249 33 0 0 chr17 90577912 90577942 -4694709 + (A)n Simple_repeat Simple_repeat 1 30 0 9 1276 21 0 0 0 chr17 90578866 90578887 -4693764 + AT_rich Low_complexity Low_complexity 1 21 0 9 1276 572 272 52 52 chr17 90579755 90580023 -4692628 - MER44B DNA MER2_type -30 520 253 9 1276 7349 78 8 1 chr17 90580023 90581048 -4691603 + L1_Mus1 LINE L1 5536 6567 0 9 1276 695 325 55 4 chr17 90581065 90581303 -4691348 - MER44B DNA MER2_type -301 249 1 9 1276 16630 178 43 122 chr17 90581598 90583679 -4688972 + L1VL2 LINE L1 433 2355 -3528 9 1276 513 47 0 0 chr17 90583679 90583743 -4688908 + (GGAAA)n Simple_repeat Simple_repeat 3 66 0 9 1276 16630 159 24 186 chr17 90583743 90584763 -4687888 + L1VL2 LINE L1 2356 3285 -2598 9 1276 591 270 39 39 chr17 90584763 90585021 -4687630 + MER44B DNA MER2_type 263 520 -30 9 1276 16630 159 24 186 chr17 90585021 90586508 -4686143 + L1VL2 LINE L1 3286 4643 -1240 9 1276 6643 62 0 3 chr17 90586508 90587361 -4685290 + L1Md_T LINE L1 5733 6582 0 9 1276 16630 159 24 186 chr17 90587361 90588968 -4683683 + L1VL2 LINE L1 4644 5804 -79 9 1276 12819 191 91 72 chr17 90588966 90590704 -4681947 + L1_Mur3 LINE L1 1739 3470 -2410 9 1276 186 71 0 0 chr17 90590704 90590732 -4681919 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 1276 12819 191 91 72 chr17 90590732 90591465 -4681186 + L1_Mur3 LINE L1 3471 4288 -1592 9 1276 414 0 0 0 chr17 90591465 90591511 -4681140 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1276 12819 191 91 72 chr17 90591511 90592839 -4679812 + L1_Mur3 LINE L1 4289 5611 -269 9 1276 1494 258 21 3 chr17 90592847 90593182 -4679469 + MTC LTR MaLR 5 345 -76 1 1276 26 0 0 0 chr17 90593993 90594019 -4678632 + AT_rich Low_complexity Low_complexity 1 26 0 1 1276 1219 279 23 0 chr17 90594616 90594921 -4677730 + MTD LTR MaLR 3 314 -105 1 1276 3111 72 5 2 chr17 90595135 90595552 -4677099 - L1_Mus1 LINE L1 0 6567 6150 1 1276 2461 85 23 0 chr17 90595552 90595904 -4676747 + MusHAL1 LINE L1 1536 1895 -817 1 1276 1168 191 41 15 chr17 90596229 90596500 -4676151 + Lx3_Mus LINE L1 677 954 -6030 1 1276 18389 95 16 187 chr17 90596493 90599996 -4672655 + Lx3_Mus LINE L1 2460 5237 -649 1 1276 342 0 0 0 chr17 90599996 90600034 -4672617 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1276 18389 83 21 59 chr17 90600034 90601786 -4670865 + Lx3_Mus LINE L1 5238 7009 0 1 1276 22 56 0 0 chr17 90602783 90602819 -4669832 + AT_rich Low_complexity Low_complexity 1 36 0 1 1276 221 208 19 29 chr17 90604377 90604481 -4668170 + GA-rich Low_complexity Low_complexity 3 105 0 1 1276 23 0 0 0 chr17 90604927 90604950 -4667701 + AT_rich Low_complexity Low_complexity 1 23 0 1 1276 21 0 0 0 chr17 90605674 90605695 -4666956 + AT_rich Low_complexity Low_complexity 1 21 0 1 1276 315 352 110 7 chr17 90606319 90606465 -4666186 - HAL1-3A_ME LINE L1 -414 2444 2284 1 1276 213 211 0 0 chr17 90606479 90606531 -4666120 + CT-rich Low_complexity Low_complexity 1 52 0 1 1276 328 211 26 0 chr17 90606531 90606607 -4666044 - B1F1 SINE Alu -1 148 71 1 1276 213 264 40 40 chr17 90607862 90607937 -4664714 - L4 LINE RTE -639 1390 1316 1 1276 267 283 53 23 chr17 90608370 90608486 -4664165 - MIR SINE MIR -110 152 33 1 1276 511 321 36 21 chr17 90608655 90608849 -4663802 + L4 LINE RTE 1219 1415 -614 1 1276 26 0 0 0 chr17 90609099 90609125 -4663526 + AT_rich Low_complexity Low_complexity 1 26 0 1 1276 351 241 138 91 chr17 90609272 90609482 -4663169 - Lx8 LINE L1 -13 7460 7241 1 1276 609 292 6 17 chr17 90609720 90609901 -4662750 + Lx9 LINE L1 7148 7326 -318 1 1276 2170 206 78 21 chr17 90609900 90610386 -4662265 + Lx3C LINE L1 5984 6497 -479 1 1276 301 198 0 44 chr17 90610386 90610476 -4662175 + Lx3C LINE L1 6889 6974 -2 1 1276 246 226 0 0 chr17 90610504 90610566 -4662085 + Lx9 LINE L1 7420 7481 -163 1 1276 381 189 0 0 chr17 90610610 90610700 -4661951 + (GGGTG)n Simple_repeat Simple_repeat 4 93 0 1 1276 245 370 0 58 chr17 90610815 90610901 -4661750 - RSINE1 SINE B4 -2 163 83 1 1276 207 0 0 0 chr17 90611506 90611529 -4661122 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1276 22 0 0 0 chr17 90612397 90612419 -4660232 + AT_rich Low_complexity Low_complexity 1 22 0 1 1276 22 35 0 0 chr17 90613108 90613137 -4659514 + AT_rich Low_complexity Low_complexity 1 29 0 1 1276 3113 46 40 21 chr17 90614873 90615294 -4657357 - L1Md_F2 LINE L1 -9 6573 6145 1 1276 1681 198 91 0 chr17 90615667 90616006 -4656645 - ORR1C2 LTR MaLR -14 370 1 1 1276 270 56 0 0 chr17 90617223 90617259 -4655392 + (TTG)n Simple_repeat Simple_repeat 1 36 0 1 1276 21 0 0 0 chr17 90618443 90618464 -4654187 + AT_rich Low_complexity Low_complexity 1 21 0 1 1276 14855 111 31 6 chr17 90618529 90621300 -4651351 + L1VL4 LINE L1 1107 3951 -1935 1 1276 940 141 0 32 chr17 90621298 90621452 -4651199 + Lx LINE L1 5604 5752 -902 1 1276 4665 135 19 18 chr17 90621452 90622237 -4650414 + Lx LINE L1 5863 6648 -6 1 1276 629 271 0 29 chr17 90622237 90622257 -4650394 + Lx6 LINE L1 5751 5770 -1690 1 1276 4692 63 2 3 chr17 90622795 90623401 -4649250 + L1_Mus1 LINE L1 5963 6567 0 1 1276 4784 148 109 0 chr17 90623528 90624384 -4648267 + Lx2 LINE L1 6043 6991 -6 1 1276 639 0 0 0 chr17 90624941 90625012 -4647639 + (CAAAA)n Simple_repeat Simple_repeat 1 71 0 1 1276 222 323 62 31 chr17 90625996 90626092 -4646559 - PB1D7 SINE Alu 0 120 22 1 1276 302 24 48 0 chr17 90626530 90626572 -4646079 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 1276 24 32 0 0 chr17 90627151 90627182 -4645469 + AT_rich Low_complexity Low_complexity 1 31 0 1 1276 584 210 6 0 chr17 90629271 90629438 -4643213 + GA-rich Low_complexity Low_complexity 2 169 0 1 1276 547 311 115 17 chr17 90630715 90631003 -4641648 + Lx8 LINE L1 6978 7293 -180 1 1276 6272 129 32 5 chr17 90631583 90632605 -4640046 - L1_Mus3 LINE L1 -351 5532 4483 1 1276 7171 94 37 1 chr17 90632604 90633668 -4638983 + L1_Mus3 LINE L1 5532 6630 -8 1 1276 483 299 38 19 chr17 90633789 90634000 -4638651 - B3 SINE B2 0 216 2 1 1276 219 280 168 8 chr17 90634691 90634810 -4637841 + ID_B1 SINE B4 87 224 0 1 1276 1120 89 0 0 chr17 90634941 90635087 -4637564 + B1_Mus1 SINE Alu 1 146 -2 1 1276 378 0 0 0 chr17 90635088 90635130 -4637521 + (TAAA)n Simple_repeat Simple_repeat 4 45 0 1 1276 469 125 0 0 chr17 90635130 90635202 -4637449 + B1_Mus2 SINE Alu 74 145 -2 1 1276 234 0 0 0 chr17 90635203 90635229 -4637422 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 1 1276 495 111 0 0 chr17 90635229 90635301 -4637350 + B1_Mur4 SINE Alu 77 148 -2 1 1276 342 0 0 0 chr17 90635302 90635340 -4637311 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 1 1276 536 34 67 0 chr17 90635663 90635752 -4636899 + (TTTTC)n Simple_repeat Simple_repeat 1 95 0 1 1276 221 0 35 0 chr17 90635874 90635903 -4636748 + (GA)n Simple_repeat Simple_repeat 1 30 0 1 1276 601 319 49 46 chr17 90635948 90636211 -4636440 - B4A SINE B4 -27 265 2 1 1276 2811 90 21 0 chr17 90636647 90637036 -4635615 - L1Md_F2 LINE L1 -1 6581 6185 1 1276 315 189 54 0 chr17 90637181 90637255 -4635396 + L1MC3 LINE L1 5424 5501 -2284 1 1276 558 0 0 0 chr17 90637271 90637333 -4635318 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 1276 372 311 64 3 chr17 90637349 90637597 -4635054 + L1MC3 LINE L1 5611 5871 -1914 1 1276 228 108 0 0 chr17 90637597 90637634 -4635017 + MTEa LTR MaLR 2 38 -341 1 1276 201 237 0 0 chr17 90637634 90637672 -4634979 + polypyrimidine Low_complexity Low_complexity 2 39 0 1 1276 207 0 0 0 chr17 90637677 90637700 -4634951 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1276 691 201 50 14 chr17 90637708 90637849 -4634802 - B1_Mus2 SINE Alu 0 147 2 1 1276 399 337 116 47 chr17 90637868 90638058 -4634593 + MTEa LTR MaLR 50 252 -127 1 1276 718 246 28 51 chr17 90638027 90638241 -4634410 + MTEb LTR MaLR 171 379 0 1 1276 297 378 58 7 chr17 90638289 90638582 -4634069 + L1MC3 LINE L1 5923 6230 -103 1 1276 441 323 12 29 chr17 90639611 90639783 -4632868 - Lx8 LINE L1 -1483 5990 5822 1 1276 2154 151 38 0 chr17 90639880 90640250 -4632401 + Lx2 LINE L1 6614 6997 0 1 1276 357 75 0 0 chr17 90640345 90640398 -4632253 + (CAGA)n Simple_repeat Simple_repeat 2 54 0 1 1276 477 0 0 0 chr17 90640403 90640456 -4632195 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 1276 434 191 41 31 chr17 90640509 90640606 -4632045 + Lx7 LINE L1 6615 6712 -984 1 1276 3057 84 63 2 chr17 90640915 90641379 -4631272 - Lx3_Mus LINE L1 -2364 5421 4902 1 1276 4945 96 19 1 chr17 90641381 90642306 -4630345 + Lx3_Mus LINE L1 5373 6315 -694 1 1276 4258 113 33 12 chr17 90642531 90643201 -4629450 + Lx3_Mus LINE L1 6324 7007 -2 1 1276 1022 108 0 0 chr17 90643951 90644090 -4628561 + B1_Mus1 SINE Alu 2 140 -8 1 1276 264 30 0 0 chr17 90644090 90644123 -4628528 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 1276 405 102 0 0 chr17 90645096 90645155 -4627496 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1276 779 182 6 0 chr17 90645322 90645492 -4627159 + (CA)n Simple_repeat Simple_repeat 2 172 0 1 1276 221 377 77 0 chr17 90646106 90646236 -4626415 - MIRb SINE MIR -73 195 56 1 1276 185 332 311 0 chr17 90648039 90648235 -4624416 - L2 LINE L2 -342 3077 2821 1 1276 601 233 0 58 chr17 90648267 90648422 -4624229 + B1_Mur2 SINE Alu 4 149 0 1 1276 215 261 182 48 chr17 90648751 90648960 -4623691 - L2 LINE L2 -1065 2354 2118 1 1276 205 136 45 0 chr17 90650201 90650245 -4622406 + (CAA)n Simple_repeat Simple_repeat 3 48 0 1 1276 31 26 0 0 chr17 90651516 90651554 -4621097 + AT_rich Low_complexity Low_complexity 1 38 0 1 1276 348 206 24 0 chr17 90652026 90652152 -4620499 + (TA)n Simple_repeat Simple_repeat 2 130 0 1 1276 438 20 0 0 chr17 90652510 90652561 -4620090 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 1276 26 30 0 0 chr17 90653921 90653954 -4618697 + AT_rich Low_complexity Low_complexity 1 33 0 1 1276 432 0 0 0 chr17 90653954 90654002 -4618649 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 1276 191 279 85 37 chr17 90655371 90655453 -4617198 + L2b LINE L2 3289 3374 -1 1 1276 264 185 0 0 chr17 90655822 90655876 -4616775 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1276 738 109 0 0 chr17 90656313 90656441 -4616210 + (TC)n Simple_repeat Simple_repeat 1 128 0 1 1276 1023 92 42 11 chr17 90656441 90656831 -4615820 + (TCTA)n Simple_repeat Simple_repeat 1 402 0 1 1276 1154 46 22 17 chr17 90656865 90657043 -4615608 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 1 1276 775 298 91 11 chr17 90657048 90657313 -4615338 - Lx6 LINE L1 -30 7430 7145 1 1276 313 352 132 0 chr17 90657344 90657503 -4615148 + B3A SINE B2 1 180 -18 1 1276 2497 124 138 8 chr17 90657750 90658221 -4614430 + RLTR47_MM LTR ERV1 1 532 0 1 1276 3087 30 0 0 chr17 90660030 90660397 -4612254 - L1Md_T LINE L1 -1 6581 6215 1 1276 207 0 0 0 chr17 90661068 90661091 -4611560 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1 1276 270 81 0 0 chr17 90661902 90661939 -4610712 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1276 239 191 16 0 chr17 90661939 90662002 -4610649 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 1276 263 291 0 23 chr17 90663087 90663175 -4609476 + GA-rich Low_complexity Low_complexity 3 88 0 1 1276 227 122 73 0 chr17 90663249 90663290 -4609361 - MARNA DNA Mariner -323 263 220 1 1276 4374 128 32 35 chr17 90665709 90666416 -4606235 + Lx LINE L1 5911 6616 -38 1 1276 351 0 0 0 chr17 90666416 90666455 -4606196 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1 1276 4374 128 32 35 chr17 90666455 90666492 -4606159 + Lx LINE L1 6617 6653 -1 1 1276 435 100 0 0 chr17 90666501 90666571 -4606080 + (GAAAA)n Simple_repeat Simple_repeat 5 74 0 1 1276 379 318 80 20 chr17 90666952 90667103 -4605548 - RSINE1 SINE B4 -4 161 2 1 1276 212 77 26 0 chr17 90667320 90667359 -4605292 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 1 1276 339 25 0 0 chr17 90668835 90668875 -4603776 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1276 195 220 0 0 chr17 90669026 90669076 -4603575 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1276 424 353 61 11 chr17 90669427 90669705 -4602946 - B4A SINE B4 0 292 1 2 1276 1175 60 55 3 chr17 90669719 90669905 -4602746 - L1_Mus1 LINE L1 -3 6579 6351 2 1276 2274 211 50 79 chr17 90670111 90670715 -4601936 + RMER13B LTR ERVK 5 590 -318 2 1276 3004 158 92 43 chr17 90670715 90671694 -4600957 + RLTR13D1 LTR ERVK 1 1023 0 2 1276 868 238 78 4 chr17 90671737 90671998 -4600653 + RMER13A LTR ERVK 559 908 0 2 1276 3597 77 8 1 chr17 90673106 90673691 -4598960 - L1_Mus1 LINE L1 -615 5952 5358 2 1276 4159 82 4 0 chr17 90673691 90674243 -4598408 + L1_Mus1 LINE L1 6014 6567 0 2 1276 532 237 94 1 chr17 90675067 90675264 -4597387 - Lx8 LINE L1 -1564 5909 5663 2 1276 1401 288 63 31 chr17 90675261 90675848 -4596803 + Lx9 LINE L1 6954 7559 -85 2 1276 1671 204 29 26 chr17 90675851 90676228 -4596423 + RLTR20B1 LTR ERVK 11 388 -175 2 1276 392 61 45 0 chr17 90677527 90677593 -4595058 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 2 1276 903 62 93 0 chr17 90677603 90677732 -4594919 - B1_Mus1 SINE Alu -6 142 2 2 1276 282 56 0 0 chr17 90679042 90679078 -4593573 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2 1276 1768 184 23 53 chr17 90679534 90679929 -4592722 + ORR1B1 LTR MaLR 12 394 0 2 1276 4165 224 118 36 chr17 90679929 90680342 -4592309 + ORR1B1-int LTR MaLR 1 423 -1369 2 1276 243 0 0 0 chr17 90680342 90680369 -4592282 + (CAAA)n Simple_repeat Simple_repeat 4 30 0 2 1276 4165 224 118 36 chr17 90680369 90681212 -4591439 + ORR1B1-int LTR MaLR 424 1359 -433 2 1276 311 295 26 9 chr17 90681453 90681566 -4591085 - Charlie5 DNA MER1_type -2509 115 1 2 1276 22 35 0 0 chr17 90682615 90682644 -4590007 + AT_rich Low_complexity Low_complexity 1 29 0 2 1276 1392 153 0 0 chr17 90682807 90683029 -4589622 - URR1B DNA MER1_type -3 222 1 2 1276 2630 166 181 24 chr17 90684110 90684747 -4587904 - RMER19A LTR ERVK 0 737 1 2 1276 307 240 113 19 chr17 90687015 90687121 -4585530 - Tigger5 DNA MER2_type 0 2406 2291 2 1276 22 35 0 0 chr17 90687456 90687485 -4585166 + AT_rich Low_complexity Low_complexity 1 29 0 2 1276 324 0 0 0 chr17 90688035 90688071 -4584580 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1276 282 266 0 12 chr17 90689642 90689722 -4582929 - Lx9 LINE L1 -373 7271 7193 2 1276 427 232 288 0 chr17 90689714 90689947 -4582704 + Lx9 LINE L1 7321 7620 -24 2 1276 23 0 0 0 chr17 90690118 90690141 -4582510 + AT_rich Low_complexity Low_complexity 1 23 0 2 1276 198 103 0 0 chr17 90690155 90690184 -4582467 + (GAA)n Simple_repeat Simple_repeat 2 30 0 2 1276 664 201 12 6 chr17 90691111 90691276 -4581375 + CT-rich Low_complexity Low_complexity 4 169 0 2 1276 285 109 0 0 chr17 90691276 90691322 -4581329 + (TTCG)n Simple_repeat Simple_repeat 3 48 0 2 1276 902 259 5 0 chr17 90693854 90694051 -4578600 - B3 SINE B2 -16 200 3 2 1276 193 392 0 0 chr17 90694764 90694866 -4577785 + MIRb SINE MIR 102 203 -65 2 1276 574 379 19 23 chr17 90695364 90695626 -4577025 + MLT1E3 LTR MaLR 335 595 -29 2 1276 240 337 10 31 chr17 90697075 90697173 -4575478 - MER5B DNA MER1_type -1 177 82 2 1276 688 303 13 75 chr17 90697671 90697899 -4574752 - B3 SINE B2 0 216 3 2 1276 360 0 0 0 chr17 90699393 90699433 -4573218 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1276 519 311 33 0 chr17 90700297 90700448 -4572203 + RSINE1 SINE B4 4 159 -6 2 1276 372 272 52 9 chr17 90701406 90701521 -4571130 + B4 SINE B4 75 194 -98 2 1277 5128 77 1 13 chr17 90701849 90702557 -4570094 - L1Md_F2 LINE L1 -10 6572 5873 2 1277 6273 77 3 0 chr17 90702557 90703413 -4569238 + L1_Mm LINE L1 4730 5626 -677 2 1277 1529 91 94 9 chr17 90703419 90703652 -4568999 + L1Md_F2 LINE L1 6317 6569 -13 2 1277 1080 191 30 8 chr17 90704010 90704247 -4568404 + Lx5 LINE L1 5726 5967 -1083 2 1277 240 297 0 0 chr17 90704507 90704571 -4568080 - MER20 DNA MER1_type -5 214 151 2 1277 240 316 25 50 chr17 90704622 90704702 -4567949 - MER20 DNA MER1_type -141 78 1 2 1277 511 112 0 22 chr17 90705121 90705212 -4567439 + (TCC)n Simple_repeat Simple_repeat 3 91 0 2 1277 856 179 19 0 chr17 90705232 90705394 -4567257 - URR1A DNA MER1_type 0 226 62 2 1277 351 122 108 0 chr17 90705925 90705999 -4566652 - Lx LINE L1 -4 6650 6569 2 1277 21 36 0 0 chr17 90706265 90706293 -4566358 + AT_rich Low_complexity Low_complexity 1 28 0 2 1277 468 0 0 0 chr17 90706940 90706992 -4565659 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 1277 228 163 23 0 chr17 90707749 90707792 -4564859 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 2 1277 24 32 0 0 chr17 90709149 90709180 -4563471 + AT_rich Low_complexity Low_complexity 1 31 0 2 1277 1397 141 14 0 chr17 90709180 90709400 -4563251 - Lx2 LINE L1 0 6997 6775 2 1277 3951 123 114 0 chr17 90709400 90710075 -4562576 - Lx2 LINE L1 -354 6643 5892 2 1277 329 382 79 15 chr17 90710076 90710278 -4562373 + MER20 DNA MER1_type 1 215 -4 2 1277 228 295 55 33 chr17 90711215 90711306 -4561345 - MIR SINE MIR -64 198 106 2 1277 882 249 116 34 chr17 90711306 90711565 -4561086 + Lx9 LINE L1 7204 7497 -147 2 1277 360 0 0 0 chr17 90711565 90711605 -4561046 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1277 882 249 116 34 chr17 90711605 90711752 -4560899 + Lx9 LINE L1 7498 7643 -1 2 1277 2602 70 22 6 chr17 90712288 90712650 -4560001 + L1Md_F2 LINE L1 6215 6582 0 2 1277 219 280 0 0 chr17 90713642 90713735 -4558916 + (CA)n Simple_repeat Simple_repeat 2 94 0 2 1277 539 242 6 0 chr17 90713762 90713940 -4558711 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 1277 263 281 12 0 chr17 90713957 90714039 -4558612 + (CA)n Simple_repeat Simple_repeat 2 84 0 2 1277 186 237 0 0 chr17 90715070 90715167 -4557484 + (TG)n Simple_repeat Simple_repeat 1 97 0 2 1277 246 267 58 29 chr17 90715263 90715367 -4557284 - L1MD1 LINE L1 -286 5956 5850 2 1277 306 0 0 0 chr17 90716614 90716648 -4556003 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 1277 292 356 0 0 chr17 90716656 90716729 -4555922 - PB1D10 SINE Alu -21 96 24 2 1277 379 212 24 0 chr17 90716937 90717022 -4555629 - Lx6 LINE L1 -16 7444 7358 2 1277 209 194 0 0 chr17 90717218 90717254 -4555397 + (TGG)n Simple_repeat Simple_repeat 1 36 0 2 1277 201 226 0 0 chr17 90717257 90717310 -4555341 + (ATG)n Simple_repeat Simple_repeat 2 54 0 2 1277 224 355 33 22 chr17 90718348 90718440 -4554211 + B3A SINE B2 8 100 -98 2 1277 243 0 0 0 chr17 90718452 90718479 -4554172 + (TA)n Simple_repeat Simple_repeat 2 28 0 2 1277 294 308 13 0 chr17 90718928 90719006 -4553645 + RSINE1 SINE B4 64 142 -23 2 1277 228 67 0 0 chr17 90719192 90719222 -4553429 + (TTTTG)n Simple_repeat Simple_repeat 4 33 0 2 1277 213 320 20 0 chr17 90719799 90719849 -4552802 - ID4_ SINE ID -28 55 5 2 1277 459 78 0 0 chr17 90720785 90720849 -4551802 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 1277 210 143 0 0 chr17 90721185 90721220 -4551431 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1277 277 350 10 0 chr17 90721415 90721512 -4551139 - ID_B1 SINE B4 -53 171 74 2 1277 330 98 0 0 chr17 90722453 90722504 -4550147 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1277 5159 128 19 6 chr17 90723480 90724928 -4547723 + L1VL2 LINE L1 66 1533 -2082 2 1277 210 37 0 0 chr17 90725170 90725197 -4547454 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 2 1277 211 279 43 14 chr17 90725515 90725584 -4547067 - MER5B DNA MER1_type -2 176 106 2 1277 270 197 16 0 chr17 90725841 90725902 -4546749 - MLT1F LTR MaLR -2 546 485 2 1277 802 313 91 11 chr17 90725911 90726176 -4546475 + B4 SINE B4 6 291 -1 2 1277 358 315 34 38 chr17 90726215 90726394 -4546257 - MLT1F1 LTR MaLR -34 646 353 2 1277 219 186 0 0 chr17 90728301 90728344 -4544307 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1277 4826 75 3 0 chr17 90729804 90730435 -4542216 - L1_Mus1 LINE L1 -6 6561 5929 2 1277 562 230 89 0 chr17 90730605 90730740 -4541911 + B1_Mus2 SINE Alu 1 147 0 2 1277 315 0 0 0 chr17 90730796 90730831 -4541820 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1277 366 107 0 0 chr17 90731820 90731876 -4540775 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 1277 5389 160 7 22 chr17 90733650 90734577 -4538074 - Lx LINE L1 -12 6642 5730 2 1277 1483 153 4 0 chr17 90734578 90734840 -4537811 + L1_Mur2 LINE L1 4894 5156 -721 2 1277 833 167 0 43 chr17 90735022 90735210 -4537441 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1277 6712 98 15 2 chr17 90736106 90737108 -4535543 - L1_Mur1 LINE L1 -1260 4626 3612 2 1277 1790 103 4 0 chr17 90737103 90737366 -4535285 + L1_Mur1 LINE L1 4622 4885 -1001 2 1277 4185 103 14 30 chr17 90737366 90738008 -4534643 + Lx3_Mus LINE L1 6370 7001 -8 2 1277 24 32 0 0 chr17 90738162 90738193 -4534458 + AT_rich Low_complexity Low_complexity 1 31 0 2 1277 23 0 0 0 chr17 90738591 90738614 -4534037 + AT_rich Low_complexity Low_complexity 1 23 0 2 1277 182 37 37 0 chr17 90738776 90738803 -4533848 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2 1277 304 352 157 25 chr17 90739106 90739129 -4533522 - Lx9 LINE L1 -122 7351 7330 2 1277 372 22 0 0 chr17 90739129 90739174 -4533477 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1277 325 324 130 9 chr17 90739174 90739408 -4533243 - Lx9 LINE L1 -189 7455 7121 2 1277 967 293 64 30 chr17 90739615 90739988 -4532663 + Lx9 LINE L1 6342 6727 -917 2 1277 210 211 64 46 chr17 90739988 90740097 -4532554 + (TATATG)n Simple_repeat Simple_repeat 1 111 0 2 1277 363 262 0 47 chr17 90740173 90740301 -4532350 + Lx9 LINE L1 6870 6991 -653 2 1277 23 33 0 0 chr17 90740664 90740694 -4531957 + AT_rich Low_complexity Low_complexity 1 30 0 2 1277 212 184 0 20 chr17 90744042 90744092 -4528559 + GA-rich Low_complexity Low_complexity 2 50 0 2 1277 909 28 0 0 chr17 90745140 90745248 -4527403 + (TCTA)n Simple_repeat Simple_repeat 2 109 0 2 1277 252 277 0 0 chr17 90747627 90747692 -4524959 + B4 SINE B4 1 65 -227 2 1277 28 71 0 0 chr17 90747759 90747815 -4524836 + AT_rich Low_complexity Low_complexity 1 56 0 2 1277 975 139 0 0 chr17 90749355 90749521 -4523130 + (GGAAA)n Simple_repeat Simple_repeat 3 168 0 2 1277 265 357 97 16 chr17 90749544 90749729 -4522922 + MIR SINE MIR 53 252 -10 3 1277 243 302 23 23 chr17 90749955 90750043 -4522608 + PB1D10 SINE Alu 9 96 -21 3 1277 26 50 0 0 chr17 90750680 90750720 -4521931 + AT_rich Low_complexity Low_complexity 1 40 0 3 1277 188 293 35 0 chr17 90751165 90751223 -4521428 + MIRb SINE MIR 31 90 -178 3 1277 220 287 38 113 chr17 90751954 90752060 -4520591 + B4A SINE B4 78 175 -117 3 1277 365 257 99 18 chr17 90751972 90752083 -4520568 + PB1 SINE Alu 6 125 -2 3 1277 247 250 0 0 chr17 90752105 90752161 -4520490 + tRNA-Ala-GCA tRNA tRNA 11 66 -9 3 1277 421 258 46 35 chr17 90753113 90753286 -4519365 + MER33 DNA MER1_type 149 323 -1 3 1277 252 262 34 86 chr17 90753421 90753538 -4519113 - L2 LINE L2 -974 2445 2335 3 1277 617 183 0 23 chr17 90753915 90754044 -4518607 + B1_Mus2 SINE Alu 10 135 -12 3 1277 448 227 34 0 chr17 90754230 90754318 -4518333 + B1_Mus1 SINE Alu 3 93 -55 3 1277 580 214 170 31 chr17 90755989 90756148 -4516503 + ORR1D1 LTR MaLR 1 181 -193 3 1277 328 294 65 22 chr17 90756148 90756287 -4516364 - HAL1-3A_ME LINE L1 -746 2112 1968 3 1277 647 278 28 28 chr17 90756287 90756502 -4516149 + ORR1D1 LTR MaLR 158 372 -2 3 1277 404 287 0 65 chr17 90756509 90756617 -4516034 + RSINE1 SINE B4 27 127 -38 3 1277 468 0 0 0 chr17 90756619 90756671 -4515980 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 1277 333 0 0 0 chr17 90756671 90756707 -4515944 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 1277 252 86 0 0 chr17 90756866 90756901 -4515750 + (TTAA)n Simple_repeat Simple_repeat 1 35 0 3 1277 22 35 0 0 chr17 90758063 90758092 -4514559 + AT_rich Low_complexity Low_complexity 1 29 0 3 1277 238 196 32 21 chr17 90759206 90759300 -4513351 + (TA)n Simple_repeat Simple_repeat 1 95 0 3 1277 235 271 143 0 chr17 90759525 90759595 -4513056 + PB1D10 SINE Alu 2 81 -36 3 1277 292 250 0 0 chr17 90761158 90761226 -4511425 - ID4 SINE ID -11 72 5 3 1277 234 207 0 0 chr17 90762010 90762068 -4510583 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 1277 863 287 5 23 chr17 90763185 90763399 -4509252 + B3 SINE B2 1 210 -6 3 1277 263 146 0 18 chr17 90763404 90763460 -4509191 + GA-rich Low_complexity Low_complexity 2 56 0 3 1277 854 307 104 21 chr17 90763685 90764015 -4508636 + ORR1E LTR MaLR 3 419 0 3 1277 189 175 0 0 chr17 90764408 90764448 -4508203 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 3 1277 31 0 0 0 chr17 90765390 90765421 -4507230 + AT_rich Low_complexity Low_complexity 1 31 0 3 1277 483 148 0 0 chr17 90765788 90765876 -4506775 + (TG)n Simple_repeat Simple_repeat 2 89 0 3 1277 4214 176 56 4 chr17 90768318 90769123 -4503528 + Lx2B LINE L1 6142 6988 -12 3 1277 7513 118 68 15 chr17 90769137 90770500 -4502151 + Lx3A LINE L1 5528 6976 -5 3 1277 43 64 0 0 chr17 90770500 90770578 -4502073 + AT_rich Low_complexity Low_complexity 1 78 0 3 1277 968 83 15 0 chr17 90770645 90770778 -4501873 + B1_Mus2 SINE Alu 8 142 -5 3 1277 26 0 0 0 chr17 90770850 90770876 -4501775 + AT_rich Low_complexity Low_complexity 1 26 0 3 1277 366 275 46 18 chr17 90771403 90771529 -4501122 - B1F1 SINE Alu -10 139 9 3 1277 1009 52 89 0 chr17 90772013 90772148 -4500503 + B1_Mus2 SINE Alu 1 147 0 3 1277 438 69 0 0 chr17 90772163 90772221 -4500430 + (GA)n Simple_repeat Simple_repeat 2 59 0 3 1277 1125 62 0 0 chr17 90772221 90772367 -4500284 + (GGAA)n Simple_repeat Simple_repeat 4 149 0 3 1277 273 111 22 0 chr17 90772408 90772453 -4500198 + B2_Mm2 SINE B2 1 46 -149 3 1277 402 359 50 20 chr17 90773210 90773412 -4499239 - B3 SINE B2 -7 209 2 3 1277 4185 45 0 4 chr17 90774641 90775153 -4497498 + L1Md_F2 LINE L1 6071 6580 -2 3 1277 279 0 0 0 chr17 90775284 90775315 -4497336 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1277 958 79 0 0 chr17 90776421 90776548 -4496103 + B1_Mus1 SINE Alu 9 135 -13 3 1277 336 24 0 0 chr17 90776548 90776589 -4496062 + (CAA)n Simple_repeat Simple_repeat 1 41 0 3 1277 708 12 0 0 chr17 90776589 90776669 -4495982 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 3 1277 323 369 54 23 chr17 90778114 90778372 -4494279 + LTR73 LTR ERV1 28 293 -279 3 1277 2287 147 57 47 chr17 90778724 90779213 -4493438 + BGLII_B LTR ERVK 1 435 -6 3 1277 335 340 10 0 chr17 90779395 90779495 -4493156 - PB1D10 SINE Alu -12 105 5 3 1277 288 53 0 0 chr17 90780616 90780654 -4491997 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1277 1883 170 79 5 chr17 90785228 90785595 -4487056 - ORR1B1 LTR MaLR 0 394 1 3 1277 5344 114 82 61 chr17 90787695 90788746 -4483905 - L1_Mus2 LINE L1 -10 6556 5487 3 1277 322 329 21 14 chr17 90789213 90789358 -4483293 + RSINE1 SINE B4 20 165 0 3 1277 210 143 0 0 chr17 90789398 90789433 -4483218 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1277 1356 182 42 122 chr17 90791024 90791198 -4481453 + RMER10B LTR ERVL 1 171 -227 3 1277 1620 14 3 8 chr17 90791198 90791378 -4481273 + (TCTCC)n Simple_repeat Simple_repeat 1 182 -187 3 1277 1620 14 3 8 chr17 90791388 90791570 -4481081 + (TCTCC)n Simple_repeat Simple_repeat 183 369 0 3 1277 1356 182 42 122 chr17 90791570 90791613 -4481038 + RMER10B LTR ERVL 172 202 -196 3 1277 210 91 0 0 chr17 90791613 90791646 -4481005 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 1277 1356 182 42 122 chr17 90791646 90791849 -4480802 + RMER10B LTR ERVL 203 398 0 3 1277 3004 211 88 38 chr17 90793448 90794309 -4478342 + RMER13B LTR ERVK 1 904 -4 3 1277 353 268 86 60 chr17 90795341 90795492 -4477159 + RLTR14 LTR ERV1 225 379 -3 3 1277 21 68 0 17 chr17 90796150 90796176 -4476475 + AT_rich Low_complexity Low_complexity 1 26 0 3 1277 740 165 271 0 chr17 90796176 90796346 -4476305 + B3 SINE B2 1 216 0 3 1277 21 68 0 17 chr17 90796346 90796379 -4476272 + AT_rich Low_complexity Low_complexity 1 33 0 3 1277 352 267 58 44 chr17 90796417 90796554 -4476097 - B1F SINE Alu -9 140 2 3 1277 23 0 0 0 chr17 90796905 90796928 -4475723 + AT_rich Low_complexity Low_complexity 1 23 0 3 1277 360 0 0 0 chr17 90798532 90798572 -4474079 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 1277 2164 45 11 0 chr17 90798573 90798842 -4473809 - L1Md_F3 LINE L1 -10 6574 6303 3 1277 27 0 0 0 chr17 90798842 90798869 -4473782 + AT_rich Low_complexity Low_complexity 1 27 0 3 1277 321 184 22 44 chr17 90799363 90799454 -4473197 + (TATATG)n Simple_repeat Simple_repeat 2 90 0 3 1277 591 159 0 0 chr17 90799457 90799570 -4473081 + (TG)n Simple_repeat Simple_repeat 2 114 0 3 1277 23 0 0 0 chr17 90799705 90799728 -4472923 + GC_rich Low_complexity Low_complexity 1 23 0 3 1277 27 0 0 0 chr17 90800816 90800843 -4471808 + AT_rich Low_complexity Low_complexity 1 27 0 3 1277 304 321 35 42 chr17 90802233 90802376 -4470275 - RSINE1 SINE B4 -21 144 3 3 1277 885 82 29 6 chr17 90802540 90802712 -4469939 + (TG)n Simple_repeat Simple_repeat 2 177 0 3 1277 511 277 56 21 chr17 90802766 90802910 -4469741 - B3 SINE B2 -67 149 1 3 1277 520 143 209 0 chr17 90803053 90803158 -4469493 - B1_Mur4 SINE Alu -23 127 1 3 1277 288 408 20 20 chr17 90804061 90804256 -4468395 + L2b LINE L2 2993 3187 -188 3 1277 180 374 88 0 chr17 90804356 90804447 -4468204 + L2b LINE L2 3290 3388 -38 3 1277 21 0 0 0 chr17 90805454 90805475 -4467176 + AT_rich Low_complexity Low_complexity 1 21 0 3 1277 1087 87 0 0 chr17 90806373 90806511 -4466140 + B1_Mus1 SINE Alu 2 139 -9 3 1277 183 42 0 0 chr17 90806511 90806535 -4466116 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1277 731 301 33 5 chr17 90806709 90806919 -4465732 + MER20 DNA MER1_type 4 219 0 3 1277 22 0 0 0 chr17 90808152 90808174 -4464477 + AT_rich Low_complexity Low_complexity 1 22 0 3 1277 388 253 0 46 chr17 90808652 90808739 -4463912 - ORR1D2 LTR MaLR -287 83 1 3 1277 294 29 0 0 chr17 90808903 90808938 -4463713 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1277 251 242 32 0 chr17 90809012 90809074 -4463577 - L1_Mur3 LINE L1 -930 4950 4887 3 1277 1429 318 47 39 chr17 90809071 90809537 -4463114 + Lx5 LINE L1 6453 6883 -577 3 1277 1032 93 0 0 chr17 90809537 90809709 -4462942 + (TG)n Simple_repeat Simple_repeat 2 173 0 3 1277 1429 318 57 20 chr17 90809709 90809946 -4462705 + Lx5 LINE L1 6796 7034 -16 3 1277 578 301 49 0 chr17 90810806 90810949 -4461702 - RSINE1 SINE B4 -13 152 3 3 1277 201 139 0 0 chr17 90811903 90811946 -4460705 + (CAAAAA)n Simple_repeat Simple_repeat 2 44 0 3 1277 23 33 0 0 chr17 90812702 90812732 -4459919 + AT_rich Low_complexity Low_complexity 1 30 0 3 1277 29 0 0 0 chr17 90813155 90813184 -4459467 + AT_rich Low_complexity Low_complexity 1 29 0 3 1277 26 0 0 0 chr17 90813584 90813610 -4459041 + AT_rich Low_complexity Low_complexity 1 26 0 3 1277 552 285 0 21 chr17 90813720 90813860 -4458791 + B1_Mm SINE Alu 2 138 -9 3 1277 527 0 16 0 chr17 90813860 90813923 -4458728 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 3 1277 360 64 0 0 chr17 90815715 90815762 -4456889 + (CCA)n Simple_repeat Simple_repeat 1 47 0 3 1277 351 227 138 52 chr17 90816649 90816765 -4455886 - B3 SINE B2 -90 126 1 3 1277 309 230 0 108 chr17 90817037 90817120 -4455531 - B4A SINE B4 -211 81 8 3 1277 428 217 19 0 chr17 90818120 90818226 -4454425 - L1MA9 LINE L1 -345 5967 5860 3 1277 27 0 0 0 chr17 90818518 90818545 -4454106 + AT_rich Low_complexity Low_complexity 1 27 0 3 1277 25 31 0 0 chr17 90818748 90818780 -4453871 + AT_rich Low_complexity Low_complexity 1 32 0 3 1277 717 198 107 6 chr17 90819897 90820065 -4452586 + RMER20B LTR ERVK 1 185 -442 3 1277 405 0 0 0 chr17 90820065 90820110 -4452541 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 1277 309 120 0 20 chr17 90820110 90820161 -4452490 + RMER20B LTR ERVK 246 295 -332 3 1277 567 361 0 0 chr17 90820187 90820345 -4452306 - RSINE1 SINE B4 -6 159 2 4 1277 195 69 0 0 chr17 90820953 90820982 -4451669 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 4 1277 356 82 34 34 chr17 90821572 90821660 -4450991 + T-rich Low_complexity Low_complexity 4 91 0 4 1277 6663 128 34 18 chr17 90821708 90824889 -4447762 + Lx2 LINE L1 357 6643 -354 4 1277 1230 156 44 0 chr17 90824889 90825094 -4447557 + Lx2 LINE L1 6775 6988 -9 4 1277 477 0 0 0 chr17 90825094 90825147 -4447504 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 4 1277 381 349 7 0 chr17 90825571 90825717 -4446934 - Tigger16a DNA Tigger -2 931 785 4 1277 288 287 16 24 chr17 90827132 90827257 -4445394 + L1M5 LINE L1 5350 5473 -767 4 1277 189 0 0 0 chr17 90828595 90828616 -4444035 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1277 7785 105 22 16 chr17 90829979 90831217 -4441434 + MusHAL1 LINE L1 566 1810 -902 4 1277 980 104 8 0 chr17 90831217 90831351 -4441300 + B1_Mus1 SINE Alu 2 136 -12 4 1277 180 0 0 0 chr17 90831828 90831848 -4440803 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 4 1277 188 287 125 21 chr17 90831881 90831977 -4440674 - MIRb SINE MIR -36 232 127 4 1277 339 295 64 123 chr17 90832060 90832111 -4440540 + L1MB8 LINE L1 5929 5970 -208 4 1277 423 171 286 0 chr17 90832111 90832216 -4440435 - B1_Mus2 SINE Alu -10 137 3 4 1277 339 295 64 123 chr17 90832216 90832384 -4440267 + L1MB8 LINE L1 5971 6135 -43 4 1277 666 25 0 0 chr17 90832416 90832496 -4440155 + (GA)n Simple_repeat Simple_repeat 1 80 0 4 1278 22 56 0 0 chr17 90833326 90833362 -4439289 + AT_rich Low_complexity Low_complexity 1 36 0 4 1278 477 345 0 80 chr17 90834240 90834391 -4438260 + RSINE1 SINE B4 11 149 -16 4 1278 516 72 0 0 chr17 90834391 90834460 -4438191 + (CA)n Simple_repeat Simple_repeat 1 69 0 4 1278 350 0 0 43 chr17 90837073 90837120 -4435531 + (TAA)n Simple_repeat Simple_repeat 1 45 0 4 1278 338 299 90 51 chr17 90837120 90837427 -4435224 + L1ME2 LINE L1 5506 5835 -338 4 1278 315 71 0 0 chr17 90837427 90837469 -4435182 + (TATG)n Simple_repeat Simple_repeat 3 44 0 4 1278 338 280 95 61 chr17 90837469 90837587 -4435064 + L1ME2 LINE L1 5836 5952 -212 4 1278 341 300 0 13 chr17 90838905 90839015 -4433636 - B1F SINE Alu -40 109 2 4 1278 307 250 34 0 chr17 90842068 90842156 -4430495 + MIRc SINE MIR 158 248 -20 4 1278 284 0 28 0 chr17 90842196 90842232 -4430419 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 4 1278 258 326 21 43 chr17 90842932 90843025 -4429626 + ID4 SINE ID 3 93 -59 4 1278 575 274 91 5 chr17 90843626 90843824 -4428827 + B3 SINE B2 2 216 0 4 1278 1354 9 29 0 chr17 90843843 90844186 -4428465 + (TAGA)n Simple_repeat Simple_repeat 1 353 0 4 1278 1148 90 0 6 chr17 90844186 90844353 -4428298 + (GAAA)n Simple_repeat Simple_repeat 2 168 0 4 1278 22 35 0 0 chr17 90845577 90845606 -4427045 + AT_rich Low_complexity Low_complexity 1 29 0 4 1278 259 287 123 26 chr17 90845957 90846111 -4426540 + MIR SINE MIR 80 248 -14 4 1278 1365 165 19 15 chr17 90846723 90846982 -4425669 + Lx3A LINE L1 6711 6970 -11 4 1278 306 0 0 0 chr17 90847122 90847156 -4425495 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1278 208 328 107 46 chr17 90847353 90847484 -4425167 + MIRb SINE MIR 77 215 -53 4 1278 441 273 21 136 chr17 90847871 90848062 -4424589 + MTE2a LTR MaLR 10 178 -201 4 1278 636 174 0 0 chr17 90848071 90848192 -4424459 + GA-rich Low_complexity Low_complexity 3 123 0 4 1278 461 260 190 29 chr17 90848192 90848366 -4424285 + MTE2a LTR MaLR 167 368 -11 4 1278 221 350 36 9 chr17 90848927 90849057 -4423594 - MIRc SINE MIR -87 175 43 4 1278 342 0 0 0 chr17 90850486 90850524 -4422127 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1278 188 208 55 36 chr17 90851965 90852020 -4420631 + L3 LINE CR1 2507 2562 -1927 4 1278 567 0 0 0 chr17 90853409 90853472 -4419179 + (TG)n Simple_repeat Simple_repeat 1 63 0 4 1278 273 209 0 0 chr17 90855185 90855252 -4417399 + A-rich Low_complexity Low_complexity 1 67 0 4 1278 243 0 0 0 chr17 90856033 90856060 -4416591 + (CAA)n Simple_repeat Simple_repeat 1 27 0 4 1278 242 337 59 0 chr17 90856437 90856538 -4416113 - PB1D9 SINE Alu -10 110 4 4 1278 897 304 82 125 chr17 90857824 90858433 -4414218 + MER82 DNA MER2_type 8 590 -63 4 1278 200 170 36 36 chr17 90863078 90863133 -4409518 + T-rich Low_complexity Low_complexity 2 56 0 4 1278 771 174 7 28 chr17 90863140 90863282 -4409369 - B1_Mus2 SINE Alu 0 147 9 4 1278 342 315 9 35 chr17 90864607 90864722 -4407929 - ID_B1 SINE B4 -7 217 106 4 1278 298 348 113 16 chr17 90867801 90868058 -4404593 + B4A SINE B4 3 284 -8 4 1278 277 346 76 60 chr17 90869138 90869319 -4403332 + L3 LINE CR1 3718 3901 -588 4 1278 2054 122 3 68 chr17 90869319 90869671 -4402980 + ORR1A4 LTR MaLR 1 329 0 4 1278 277 346 76 60 chr17 90869671 90869803 -4402848 + L3 LINE CR1 3902 4036 -453 4 1278 872 170 154 5 chr17 90870455 90870650 -4402001 + URR1A DNA MER1_type 3 226 0 4 1278 212 267 0 0 chr17 90871165 90871210 -4401441 + (CATA)n Simple_repeat Simple_repeat 4 48 0 4 1278 305 24 24 0 chr17 90872591 90872633 -4400018 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 1278 1143 70 0 0 chr17 90872636 90872778 -4399873 - B1_Mus1 SINE Alu -6 142 1 4 1278 307 351 0 0 chr17 90872859 90872953 -4399698 - PB1D10 SINE Alu -1 116 23 4 1278 1024 220 26 95 chr17 90873008 90873301 -4399350 + Lx7 LINE L1 7298 7559 -137 4 1278 1544 47 5 0 chr17 90873301 90873491 -4399160 - B2_Mm1a SINE B2 0 193 3 4 1278 1024 220 26 95 chr17 90873491 90873619 -4399032 + Lx7 LINE L1 7560 7690 -6 4 1278 573 115 0 0 chr17 90874372 90874459 -4398192 + (CGTG)n Simple_repeat Simple_repeat 1 87 0 4 1278 501 275 120 45 chr17 90876350 90876523 -4396128 - B3A SINE B2 -11 182 6 4 1278 319 244 186 6 chr17 90877609 90877770 -4394881 - L1MD LINE L1 -2876 3270 3081 4 1278 303 93 0 0 chr17 90877805 90877848 -4394803 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 1278 248 328 0 0 chr17 90878177 90878238 -4394413 + L2a LINE L2 3361 3421 -5 4 1278 2974 32 93 0 chr17 90878368 90878744 -4393907 - IAPLTR2a LTR ERVK 0 411 1 4 1278 616 293 38 11 chr17 90879562 90879768 -4392883 - B3A SINE B2 -6 210 1 4 1278 314 220 236 32 chr17 90881419 90881530 -4391121 - B1_Mur1 SINE Alu -6 143 3 4 1278 237 65 0 0 chr17 90881652 90881683 -4390968 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 4 1278 255 371 37 28 chr17 90882113 90882221 -4390430 + B1F SINE Alu 32 140 -9 4 1278 438 304 154 59 chr17 90882574 90882794 -4389857 + B4A SINE B4 3 243 -49 4 1278 471 63 0 0 chr17 90882811 90882874 -4389777 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 1278 495 0 0 0 chr17 90882874 90882928 -4389723 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 1278 726 44 0 0 chr17 90883643 90883733 -4388918 + (GA)n Simple_repeat Simple_repeat 1 90 0 4 1278 626 217 78 0 chr17 90883765 90883880 -4388771 + B1_Mus2 SINE Alu 10 133 -14 4 1278 402 21 0 0 chr17 90883880 90883927 -4388724 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 4 1278 599 221 86 8 chr17 90883927 90883939 -4388712 + B1_Mur3 SINE Alu 136 147 -2 4 1278 234 321 37 0 chr17 90885914 90885995 -4386656 - Tigger7 DNA MER2_type -2219 272 189 4 1278 273 361 37 9 chr17 90886026 90886135 -4386516 - Tigger7 DNA MER2_type -2378 113 2 4 1278 773 50 0 0 chr17 90886359 90886460 -4386191 + B1_Mus2 SINE Alu 46 146 -1 4 1278 4288 146 52 1 chr17 90886523 90887324 -4385327 + MusHAL1 LINE L1 1129 1970 -742 4 1278 752 24 0 0 chr17 90887325 90887409 -4385242 + L1Md_F2 LINE L1 6353 6436 -146 4 1278 228 100 0 0 chr17 90887409 90887449 -4385202 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 4 1278 226 385 7 26 chr17 90887455 90887607 -4385044 + L3 LINE CR1 3738 3886 -603 4 1278 8867 131 4 5 chr17 90888865 90890284 -4382367 - L1_Mm LINE L1 -480 5403 3986 4 1278 3557 138 2 17 chr17 90890278 90890854 -4381797 + L1_Mm LINE L1 5079 5645 -238 4 1278 335 73 18 0 chr17 90892786 90892841 -4379810 + (TTTG)n Simple_repeat Simple_repeat 1 56 0 4 1278 549 258 173 6 chr17 90893226 90893405 -4379246 + B3 SINE B2 1 209 -7 4 1278 463 322 64 0 chr17 90893924 90894095 -4378556 - B3A SINE B2 -16 182 1 4 1278 687 307 6 22 chr17 90894104 90894287 -4378364 - ID_B1 SINE B4 -16 208 29 4 1278 463 325 63 0 chr17 90894407 90894598 -4378053 + Charlie20a DNA Charlie 140 342 -465 4 1278 399 250 22 0 chr17 90895332 90895468 -4377183 + (CA)n Simple_repeat Simple_repeat 2 140 0 4 1278 290 214 28 0 chr17 90895498 90895643 -4377008 + (CA)n Simple_repeat Simple_repeat 1 149 0 4 1278 303 53 39 39 chr17 90896001 90896079 -4376572 + (TTTTG)n Simple_repeat Simple_repeat 3 80 0 4 1278 243 394 29 21 chr17 90896214 90896354 -4376297 - ID_B1 SINE B4 0 224 84 4 1278 180 158 0 0 chr17 90896657 90896695 -4375956 + (CAA)n Simple_repeat Simple_repeat 1 38 0 4 1278 21 0 0 0 chr17 90897823 90897844 -4374807 + AT_rich Low_complexity Low_complexity 1 21 0 4 1278 1909 135 6 32 chr17 90898974 90899312 -4373339 - ORR1A4 LTR MaLR 0 329 1 4 1278 606 28 0 0 chr17 90899456 90899528 -4373123 + (TG)n Simple_repeat Simple_repeat 2 73 0 4 1278 359 233 0 85 chr17 90899530 90899624 -4373027 - B4A SINE B4 -23 269 184 4 1278 189 107 0 0 chr17 90900476 90900504 -4372147 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 4 1278 725 64 54 9 chr17 90901106 90901217 -4371434 - MusHAL1 LINE L1 -2014 698 583 4 1278 404 357 172 7 chr17 90901220 90901516 -4371135 - Tigger7 DNA MER2_type -2143 348 4 4 1278 816 264 11 0 chr17 90901922 90902096 -4370555 + B3 SINE B2 5 180 -36 4 1278 23 54 0 0 chr17 90902114 90902151 -4370500 + AT_rich Low_complexity Low_complexity 1 37 0 4 1278 336 337 71 0 chr17 90902424 90902522 -4370129 + ID_B1 SINE B4 82 186 -38 5 1278 224 333 137 38 chr17 90904782 90904994 -4367657 - MIRb SINE MIR -5 257 25 5 1278 378 0 0 0 chr17 90905284 90905326 -4367325 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1278 590 319 9 18 chr17 90905937 90906157 -4366494 - ID_B1 SINE B4 -3 221 4 5 1278 309 307 58 19 chr17 90906254 90906357 -4366294 + RSINE1 SINE B4 24 130 -35 5 1278 4623 117 32 12 chr17 90907302 90908024 -4364627 + Lx LINE L1 5912 6647 -7 5 1278 229 267 0 16 chr17 90908348 90908531 -4364120 + CT-rich Low_complexity Low_complexity 1 180 0 5 1278 665 201 111 4 chr17 90910685 90910910 -4361741 + Lx9 LINE L1 7390 7638 -6 5 1278 512 226 30 82 chr17 90911369 90911504 -4361147 + B1_Mur2 SINE Alu 16 143 -6 5 1278 1774 145 25 7 chr17 90911590 90912083 -4360568 + L1_Mus1 LINE L1 784 1295 -5365 5 1278 14087 94 24 3 chr17 90912084 90914838 -4357813 + L1_Mus1 LINE L1 3742 6565 -5 5 1278 32 0 0 0 chr17 90914838 90914870 -4357781 + AT_rich Low_complexity Low_complexity 1 32 0 5 1278 360 64 0 0 chr17 90914950 90914997 -4357654 + (TTCA)n Simple_repeat Simple_repeat 3 49 0 5 1278 810 167 18 1 chr17 90915008 90915155 -4357496 - B2_Mm2 SINE B2 -57 159 1 5 1278 371 344 8 8 chr17 90916861 90916984 -4355667 + ID_B1 SINE B4 80 202 -22 5 1278 1688 110 11 39 chr17 90917832 90918115 -4354536 + L1_Mus4 LINE L1 6362 6636 0 5 1278 1124 181 18 35 chr17 90919675 90919904 -4352747 + URR1B DNA MER1_type 1 225 0 5 1278 22 56 0 0 chr17 90921019 90921055 -4351596 + AT_rich Low_complexity Low_complexity 1 36 0 5 1278 190 298 190 0 chr17 90922585 90922706 -4349945 - L2b LINE L2 -225 3150 3007 5 1278 29 47 0 0 chr17 90923226 90923269 -4349382 + AT_rich Low_complexity Low_complexity 1 43 0 5 1278 201 39 0 0 chr17 90923287 90923313 -4349338 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 5 1278 216 324 0 14 chr17 90925761 90925833 -4346818 + RSINE1 SINE B4 69 139 -26 5 1278 1209 34 0 0 chr17 90925833 90925979 -4346672 + (CA)n Simple_repeat Simple_repeat 1 146 0 5 1278 614 323 17 19 chr17 90926160 90926378 -4346273 - B3A SINE B2 0 216 6 5 1278 300 292 211 20 chr17 90928206 90928405 -4344246 + MER58B DNA MER1_type 104 340 -1 5 1278 4833 90 12 1 chr17 90928837 90929518 -4343133 - L1_Mus4 LINE L1 -1 6635 5948 5 1278 340 331 42 0 chr17 90929972 90930114 -4342537 + B1F1 SINE Alu 1 148 -1 5 1278 427 73 0 29 chr17 90933107 90933177 -4339474 + (TTCC)n Simple_repeat Simple_repeat 1 68 0 5 1278 240 294 109 84 chr17 90933194 90933432 -4339219 - Lx8 LINE L1 -6 7467 7224 5 1278 242 274 55 0 chr17 90933472 90933545 -4339106 + Lx8 LINE L1 6085 6161 -1312 5 1278 525 32 0 0 chr17 90933562 90933625 -4339026 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 1278 997 276 117 72 chr17 90933625 90934027 -4338624 + Lx8 LINE L1 6219 6638 -835 5 1278 247 257 72 37 chr17 90934025 90934185 -4338466 + L1_Mur3 LINE L1 5115 5315 -562 5 1278 944 234 36 0 chr17 90934194 90934386 -4338265 - B3 SINE B2 -4 212 14 5 1278 1401 282 41 41 chr17 90934386 90934952 -4337699 + L1_Mur3 LINE L1 5295 5860 -20 5 1278 278 395 0 0 chr17 90935014 90935095 -4337556 - ID4_ SINE ID 0 83 3 5 1278 228 78 78 0 chr17 90935705 90935756 -4336895 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 5 1278 32 81 0 0 chr17 90937039 90937113 -4335538 + AT_rich Low_complexity Low_complexity 1 74 0 5 1278 24 0 0 0 chr17 90938924 90938948 -4333703 + AT_rich Low_complexity Low_complexity 1 24 0 5 1278 236 352 19 0 chr17 90940354 90940459 -4332192 - MER96B DNA hAT -7 410 304 5 1278 235 316 68 26 chr17 90940364 90940481 -4332170 + MER96B DNA hAT 15 136 -281 5 1278 465 19 0 0 chr17 90940551 90940605 -4332046 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1278 247 253 80 74 chr17 90940657 90940819 -4331832 - MER96B DNA hAT -140 277 115 5 1278 516 350 60 66 chr17 90941887 90942220 -4330431 - ORR1E LTR MaLR -28 331 1 5 1278 22 35 0 0 chr17 90943091 90943120 -4329531 + AT_rich Low_complexity Low_complexity 1 29 0 5 1278 194 122 73 0 chr17 90943136 90943177 -4329474 + C-rich Low_complexity Low_complexity 1 44 0 5 1278 229 328 0 0 chr17 90944897 90944964 -4327687 - MER5A DNA MER1_type -115 74 8 5 1278 342 0 0 0 chr17 90945506 90945544 -4327107 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1278 469 138 21 0 chr17 90947763 90947857 -4324794 + (TA)n Simple_repeat Simple_repeat 1 96 0 5 1278 224 250 52 0 chr17 90948060 90948156 -4324495 + (TA)n Simple_repeat Simple_repeat 2 102 0 5 1278 183 392 0 29 chr17 90948384 90948489 -4324162 - MER5A DNA MER1_type -87 102 1 5 1278 436 221 95 82 chr17 90948512 90948670 -4323981 - MT2B LTR ERVL -267 334 175 5 1278 955 98 0 0 chr17 90948548 90948680 -4323971 - B1_Mus1 SINE Alu -15 133 2 5 1278 415 170 0 20 chr17 90949443 90949545 -4323106 + (CA)n Simple_repeat Simple_repeat 2 101 0 5 1278 243 204 0 0 chr17 90949678 90949732 -4322919 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 1278 4184 88 35 22 chr17 90952677 90953029 -4319622 - Lx3_Mus LINE L1 -738 6271 5907 5 1278 216 0 0 0 chr17 90953029 90953053 -4319598 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 5 1278 4184 83 2 11 chr17 90953053 90953464 -4319187 - Lx3_Mus LINE L1 -1103 5906 5502 5 1278 5457 82 12 1 chr17 90953464 90954198 -4318453 + Lx3_Mus LINE L1 6268 7009 0 5 1278 237 0 21 85 chr17 90957076 90957123 -4315528 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 5 1278 2064 72 0 21 chr17 90958186 90958471 -4314180 + L1Md_F2 LINE L1 6289 6567 -15 5 1278 241 171 0 0 chr17 90958654 90958695 -4313956 - Lx8 LINE L1 -151 7322 7282 5 1278 245 371 9 9 chr17 90958873 90958979 -4313672 - Lx8 LINE L1 -194 7279 7174 5 1278 215 174 22 0 chr17 90960231 90960277 -4312374 + T-rich Low_complexity Low_complexity 2 48 0 5 1278 270 0 0 0 chr17 90963577 90963607 -4309044 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 5 1279 21 0 0 0 chr17 90964588 90964609 -4308042 + AT_rich Low_complexity Low_complexity 1 21 0 5 1279 286 43 0 0 chr17 90965286 90965357 -4307294 - L1_Mus4 LINE L1 0 6636 6581 5 1279 4951 75 26 7 chr17 90965366 90966064 -4306587 + L1_Mus3 LINE L1 5928 6638 0 5 1279 192 77 0 0 chr17 90966178 90966204 -4306447 + (A)n Simple_repeat Simple_repeat 1 26 0 5 1279 23 54 0 0 chr17 90966511 90966548 -4306103 + AT_rich Low_complexity Low_complexity 1 37 0 5 1279 381 302 8 0 chr17 90966845 90966974 -4305677 + CT-rich Low_complexity Low_complexity 2 131 0 5 1279 230 236 39 47 chr17 90967361 90967490 -4305161 - Lx9 LINE L1 0 7644 7517 5 1279 693 34 0 0 chr17 90967495 90967583 -4305068 + (CA)n Simple_repeat Simple_repeat 2 89 0 5 1279 617 289 46 20 chr17 90967747 90968051 -4304600 - Lx9 LINE L1 -190 7454 7143 5 1279 302 43 43 0 chr17 90968053 90968100 -4304551 + (TTTTG)n Simple_repeat Simple_repeat 1 49 0 5 1279 318 250 27 99 chr17 90968109 90968220 -4304431 - Lx9 LINE L1 -490 6983 6887 5 1279 341 308 98 30 chr17 90968707 90968904 -4303747 + LTR40c LTR ERVL 288 494 -25 5 1279 218 373 45 51 chr17 90971244 90971422 -4301229 + MIRb SINE MIR 68 244 -24 5 1279 355 374 6 30 chr17 90973798 90973966 -4298685 - RSINE1 SINE B4 0 165 2 5 1279 22 35 0 0 chr17 90974390 90974419 -4298232 + AT_rich Low_complexity Low_complexity 1 29 0 5 1279 3545 88 14 10 chr17 90974427 90974909 -4297742 + L1Md_F2 LINE L1 6065 6542 -40 5 1279 364 67 16 16 chr17 90974909 90974970 -4297681 + (TAAA)n Simple_repeat Simple_repeat 1 61 0 5 1279 3545 88 14 10 chr17 90974970 90974994 -4297657 + L1Md_F2 LINE L1 6543 6573 -9 5 1279 222 118 0 0 chr17 90975941 90975975 -4296676 + (CAA)n Simple_repeat Simple_repeat 2 35 0 5 1279 551 229 7 35 chr17 90977512 90977657 -4294994 + B1_Mur4 SINE Alu 2 142 -8 5 1279 9228 105 8 5 chr17 90977658 90979210 -4293441 + Lx3_Mus LINE L1 5454 7009 0 5 1279 774 296 5 0 chr17 90979659 90979845 -4292806 + B3 SINE B2 25 211 -5 5 1279 552 313 65 41 chr17 90980462 90980632 -4292019 - B3A SINE B2 -22 176 3 5 1279 244 368 73 0 chr17 90980987 90981123 -4291528 - Tigger12c DNA MER2_type -585 149 4 5 1279 384 299 90 99 chr17 90981609 90981821 -4290830 + B3 SINE B2 1 210 -6 5 1279 198 0 0 0 chr17 90985444 90985466 -4287185 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 5 1279 452 316 131 27 chr17 90985473 90985733 -4286918 + B4A SINE B4 5 291 -1 5 1279 378 0 0 0 chr17 90987115 90987157 -4285494 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1279 608 37 24 0 chr17 90987171 90987253 -4285398 + (TAGA)n Simple_repeat Simple_repeat 2 85 0 5 1279 432 0 0 0 chr17 90987284 90987332 -4285319 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1279 522 31 0 0 chr17 90987346 90987410 -4285241 + (TAGA)n Simple_repeat Simple_repeat 2 65 0 5 1279 537 58 0 0 chr17 90987441 90987510 -4285141 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 1279 666 25 0 0 chr17 90988587 90988667 -4283984 + (TG)n Simple_repeat Simple_repeat 2 81 0 5 1279 427 357 21 7 chr17 90989809 90989950 -4282701 + B1F SINE Alu 3 145 -4 5 1279 243 0 0 0 chr17 90991725 90991752 -4280899 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 1279 259 92 142 0 chr17 90991875 90991995 -4280656 + (CACAG)n Simple_repeat Simple_repeat 4 140 0 5 1279 368 94 69 52 chr17 90992015 90992369 -4280282 + (CACAG)n Simple_repeat Simple_repeat 1 360 0 5 1279 472 84 98 25 chr17 90992435 90992757 -4279894 + (CACAG)n Simple_repeat Simple_repeat 1 345 0 5 1279 479 93 93 40 chr17 90992773 90993492 -4279159 + (CACAG)n Simple_repeat Simple_repeat 1 757 0 5 1279 23 0 0 0 chr17 90993774 90993797 -4278854 + AT_rich Low_complexity Low_complexity 1 23 0 5 1279 977 204 79 35 chr17 90994084 90994338 -4278313 - Lx6 LINE L1 -4 7456 7192 5 1279 3286 124 43 30 chr17 90995139 90995696 -4276955 + LTRIS2 LTR ERV1 1 564 0 5 1279 827 287 27 169 chr17 90996071 90996318 -4276333 + MTC LTR MaLR 1 218 -203 5 1279 738 129 145 0 chr17 90996318 90996442 -4276209 + B1_Mus1 SINE Alu 1 142 -6 5 1279 306 0 0 0 chr17 90996442 90996476 -4276175 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 1279 827 287 27 169 chr17 90996476 90996629 -4276022 + MTC LTR MaLR 219 344 -77 5 1279 823 148 11 22 chr17 90997093 90997273 -4275378 + GA-rich Low_complexity Low_complexity 2 179 0 5 1279 34 42 0 0 chr17 90998029 90998077 -4274574 + AT_rich Low_complexity Low_complexity 1 48 0 6 1279 216 0 0 0 chr17 90998678 90998702 -4273949 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1279 338 331 40 24 chr17 91000150 91000274 -4272377 + MLT1A LTR MaLR 7 132 -242 1 1279 270 0 0 0 chr17 91000282 91000312 -4272339 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2 1279 651 26 0 0 chr17 91001370 91001447 -4271204 + (GA)n Simple_repeat Simple_repeat 2 78 0 3 1279 251 268 0 14 chr17 91001469 91001541 -4271110 + GA-rich Low_complexity Low_complexity 2 72 0 4 1279 4216 53 8 4 chr17 91002338 91002872 -4269779 + L1Md_F2 LINE L1 6047 6582 0 5 1279 21 0 0 0 chr17 91003184 91003205 -4269446 + AT_rich Low_complexity Low_complexity 1 21 0 6 1279 234 215 0 102 chr17 91003467 91003555 -4269096 + T-rich Low_complexity Low_complexity 1 79 0 7 1279 24 32 0 0 chr17 91004147 91004178 -4268473 + AT_rich Low_complexity Low_complexity 1 31 0 8 1279 525 275 53 53 chr17 91004657 91004759 -4267892 - B3 SINE B2 -42 174 81 9 1279 387 0 0 0 chr17 91004759 91004802 -4267849 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1279 525 275 53 53 chr17 91004802 91004868 -4267783 - B3 SINE B2 -136 80 6 9 1279 342 183 0 0 chr17 91005584 91005655 -4266996 + T-rich Low_complexity Low_complexity 1 71 0 1 1279 1008 106 0 14 chr17 91005656 91005799 -4266852 - B1_Mus1 SINE Alu 0 148 8 1 1279 486 0 0 0 chr17 91006063 91006117 -4266534 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1279 24 0 0 0 chr17 91006413 91006437 -4266214 + AT_rich Low_complexity Low_complexity 1 24 0 1 1279 261 0 0 0 chr17 91006457 91006486 -4266165 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1279 339 314 49 8 chr17 91006670 91006792 -4265859 - MER45A DNA Tip100 0 178 52 1 1279 180 243 12 75 chr17 91007410 91007490 -4265161 + MIR SINE MIR 81 155 -107 1 1279 697 248 0 26 chr17 91007719 91007872 -4264779 - B1_Mur3 SINE Alu 0 149 1 1 1279 336 77 0 0 chr17 91009597 91009649 -4263002 + (GA)n Simple_repeat Simple_repeat 1 52 0 1 1279 626 309 17 0 chr17 91010551 91010729 -4261922 + B3A SINE B2 2 182 -16 2 1279 26 30 0 0 chr17 91010744 91010777 -4261874 + AT_rich Low_complexity Low_complexity 1 33 0 2 1279 462 18 0 0 chr17 91011071 91011126 -4261525 + (TC)n Simple_repeat Simple_repeat 2 56 0 2 1279 279 0 0 0 chr17 91011126 91011156 -4261495 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1279 226 286 0 16 chr17 91011972 91012036 -4260615 + CT-rich Low_complexity Low_complexity 4 66 0 2 1279 548 370 35 19 chr17 91015245 91015501 -4257150 + B4A SINE B4 1 260 -32 2 1279 608 120 0 23 chr17 91015524 91015652 -4256999 + (TCTCTG)n Simple_repeat Simple_repeat 5 129 0 2 1279 558 0 0 0 chr17 91015677 91015739 -4256912 + (TC)n Simple_repeat Simple_repeat 1 62 0 2 1279 234 0 0 0 chr17 91015739 91015764 -4256887 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 1279 229 145 79 16 chr17 91016350 91016413 -4256238 + (TCTCTG)n Simple_repeat Simple_repeat 5 71 0 2 1279 616 304 128 28 chr17 91016850 91017138 -4255513 + ORR1D2 LTR MaLR 54 370 0 3 1279 183 299 72 29 chr17 91017286 91017355 -4255296 - L3 LINE CR1 -3622 867 796 3 1279 1284 75 0 0 chr17 91018395 91018648 -4254003 + (GAA)n Simple_repeat Simple_repeat 1 253 0 3 1279 207 0 0 0 chr17 91021102 91021125 -4251526 + (TTA)n Simple_repeat Simple_repeat 2 24 0 3 1279 507 17 0 0 chr17 91021636 91021696 -4250955 + (TG)n Simple_repeat Simple_repeat 2 61 0 3 1279 24 0 0 0 chr17 91022018 91022042 -4250609 + AT_rich Low_complexity Low_complexity 1 24 0 3 1279 25 0 0 0 chr17 91022586 91022611 -4250040 + AT_rich Low_complexity Low_complexity 1 25 0 3 1279 647 248 130 90 chr17 91024308 91024653 -4247998 + RLTR9A LTR ERVK 10 368 0 3 1279 5279 83 44 1 chr17 91025107 91025852 -4246799 - L1_Mus1 LINE L1 0 6567 5791 3 1279 23 78 0 0 chr17 91025929 91025980 -4246671 + AT_rich Low_complexity Low_complexity 1 51 0 3 1279 32 43 0 0 chr17 91026264 91026310 -4246341 + AT_rich Low_complexity Low_complexity 1 46 0 4 1279 180 0 0 0 chr17 91028471 91028491 -4244160 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 1279 508 180 28 35 chr17 91029719 91029863 -4242788 - Lx9 LINE L1 0 7644 7502 4 1279 23 0 0 0 chr17 91030056 91030079 -4242572 + AT_rich Low_complexity Low_complexity 1 23 0 4 1279 227 56 56 0 chr17 91030731 91030767 -4241884 + (CAGAGA)n Simple_repeat Simple_repeat 2 39 0 4 1279 341 151 59 0 chr17 91031958 91032077 -4240574 + GA-rich Low_complexity Low_complexity 1 126 0 4 1279 209 213 32 16 chr17 91032094 91032156 -4240495 + (TATG)n Simple_repeat Simple_repeat 2 64 0 4 1279 393 329 63 63 chr17 91032158 91032379 -4240272 - B4A SINE B4 -1 291 71 4 1279 2329 170 43 2 chr17 91032396 91032839 -4239812 - Lx5 LINE L1 -237 5640 5180 4 1279 6760 199 33 11 chr17 91032841 91034206 -4238445 + Lx5 LINE L1 5647 7041 -9 4 1279 26 30 0 0 chr17 91034543 91034576 -4238075 + AT_rich Low_complexity Low_complexity 1 33 0 4 1279 427 270 199 38 chr17 91034579 91034841 -4237810 - Lx8 LINE L1 -19 7454 7151 5 1279 558 104 0 0 chr17 91034944 91035040 -4237611 + (TC)n Simple_repeat Simple_repeat 2 97 0 5 1279 288 0 0 0 chr17 91035040 91035072 -4237579 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1279 30 0 0 0 chr17 91038169 91038199 -4234452 + AT_rich Low_complexity Low_complexity 1 30 0 5 1279 25 0 0 0 chr17 91040079 91040104 -4232547 + AT_rich Low_complexity Low_complexity 1 25 0 5 1279 197 137 0 38 chr17 91040219 91040272 -4232379 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 5 1279 23 33 0 0 chr17 91040897 91040927 -4231724 + AT_rich Low_complexity Low_complexity 1 30 0 5 1279 27 49 0 0 chr17 91042083 91042124 -4230527 + AT_rich Low_complexity Low_complexity 1 41 0 5 1279 183 265 0 0 chr17 91045561 91045663 -4226988 + (TA)n Simple_repeat Simple_repeat 2 103 0 5 1279 453 299 3 0 chr17 91047292 91047417 -4225234 + B1_Mur2 SINE Alu 1 127 -22 5 1279 457 243 68 0 chr17 91047664 91047767 -4224884 + B1F SINE Alu 1 110 -39 6 1279 24 32 0 0 chr17 91050732 91050763 -4221888 + AT_rich Low_complexity Low_complexity 1 31 0 6 1279 442 313 26 0 chr17 91050799 91050914 -4221737 - PB1D9 SINE Alu -1 119 2 6 1279 21 0 0 0 chr17 91051015 91051036 -4221615 + AT_rich Low_complexity Low_complexity 1 21 0 6 1279 429 20 0 0 chr17 91051748 91051798 -4220853 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 1279 735 233 82 60 chr17 91052040 91052223 -4220428 + B3 SINE B2 29 215 -1 6 1279 451 298 96 9 chr17 91054331 91054561 -4218090 + MER96B DNA hAT 1 250 -167 6 1279 566 325 72 20 chr17 91054983 91055178 -4217473 - B4 SINE B4 -72 220 16 6 1279 188 283 43 0 chr17 91055246 91055292 -4217359 - MIR SINE MIR -55 153 106 6 1279 489 303 112 0 chr17 91056087 91056239 -4216412 + B3A SINE B2 11 179 -19 6 1279 22 0 0 0 chr17 91057387 91057409 -4215242 + AT_rich Low_complexity Low_complexity 1 22 0 7 1279 193 44 13 93 chr17 91058227 91058302 -4214349 + (CTATA)n Simple_repeat Simple_repeat 5 73 0 7 1279 189 349 46 11 chr17 91058558 91058645 -4214006 - MIRc SINE MIR -101 167 78 7 1279 1228 82 43 11 chr17 91059216 91059402 -4213249 + B2_Mm2 SINE B2 1 192 -3 7 1279 597 286 47 16 chr17 91059608 91059800 -4212851 + Lx8 LINE L1 6961 7158 -315 7 1279 2269 208 11 24 chr17 91060197 91060666 -4211985 + Lx5 LINE L1 6485 6947 -103 7 1279 235 293 0 47 chr17 91060666 91060752 -4211899 + B3A SINE B2 101 182 -16 7 1279 309 167 0 0 chr17 91060790 91060868 -4211783 + (CA)n Simple_repeat Simple_repeat 1 78 0 7 1279 600 14 0 0 chr17 91060869 91060938 -4211713 + (TC)n Simple_repeat Simple_repeat 2 70 0 7 1279 260 326 63 0 chr17 91062569 91062664 -4209987 + L2b LINE L2 3267 3367 -8 7 1279 366 316 170 12 chr17 91062975 91063222 -4209429 - Tigger7 DNA MER2_type -6 2485 2200 8 1279 441 375 120 0 chr17 91063218 91063493 -4209158 - Tigger7 DNA MER2_type -2162 329 22 8 1279 308 133 0 16 chr17 91064828 91064889 -4207762 + (TA)n Simple_repeat Simple_repeat 2 61 0 8 1279 474 18 0 0 chr17 91064920 91064975 -4207676 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 8 1279 222 167 0 62 chr17 91064975 91065039 -4207612 + (TCTG)n Simple_repeat Simple_repeat 1 60 0 8 1279 1192 152 0 0 chr17 91065039 91065243 -4207408 - L1_Mur1 LINE L1 -1036 4850 4647 8 1279 236 262 16 0 chr17 91065374 91065435 -4207216 + (TG)n Simple_repeat Simple_repeat 1 62 0 8 1279 230 118 0 0 chr17 91065533 91065567 -4207084 + L1_Mur1 LINE L1 5201 5234 -652 8 1279 24 85 0 0 chr17 91065660 91065719 -4206932 + AT_rich Low_complexity Low_complexity 1 59 0 8 1279 1210 91 20 56 chr17 91065729 91065927 -4206724 + B2_Mm2 SINE B2 4 194 -1 8 1279 266 26 53 0 chr17 91066276 91066314 -4206337 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 8 1279 1063 75 7 40 chr17 91066798 91066935 -4205716 + B1_Mus1 SINE Alu 2 139 -9 9 1279 531 0 0 0 chr17 91066935 91066994 -4205657 + (CAAAC)n Simple_repeat Simple_repeat 2 60 0 9 1279 1063 75 7 40 chr17 91066994 91067008 -4205643 + B1_Mus1 SINE Alu 140 148 0 9 1279 243 0 0 0 chr17 91067046 91067073 -4205578 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 1279 358 275 71 64 chr17 91067086 91067226 -4205425 + B1F1 SINE Alu 7 147 -1 9 1279 523 304 92 24 chr17 91068086 91068292 -4204359 - ID_B1 SINE B4 -2 222 3 9 1279 202 250 24 24 chr17 91068827 91068909 -4203742 + A-rich Low_complexity Low_complexity 4 85 0 9 1279 2261 128 23 6 chr17 91070426 91070780 -4201871 + Lx4A LINE L1 6698 7057 -1 9 1279 195 358 0 24 chr17 91071195 91071278 -4201373 + MIRc SINE MIR 85 165 -103 9 1279 372 308 44 6 chr17 91071278 91071438 -4201213 + L1MB1 LINE L1 5872 6037 -152 9 1279 218 256 0 0 chr17 91071571 91071614 -4201037 - ID4_ SINE ID -34 49 7 9 1279 582 252 0 8 chr17 91072748 91072880 -4199771 - B1F1 SINE Alu -1 148 18 1 1279 507 56 0 0 chr17 91072929 91073000 -4199651 + (TC)n Simple_repeat Simple_repeat 2 72 0 1 1279 198 91 0 0 chr17 91073003 91073036 -4199615 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 1 1279 218 254 125 16 chr17 91073068 91073132 -4199519 - B1F SINE Alu -78 71 1 1 1279 714 298 139 52 chr17 91073736 91074023 -4198628 + MTE2b LTR MaLR 5 316 -63 1 1279 348 338 166 62 chr17 91074332 91074591 -4198060 + MLT1A0 LTR MaLR 78 363 -2 1 1279 630 13 0 0 chr17 91074754 91074829 -4197822 - L1_Mus1 LINE L1 -247 6320 6246 1 1279 1281 190 29 22 chr17 91074829 91075104 -4197547 + L1Md_T LINE L1 6306 6582 0 1 1279 289 328 47 94 chr17 91075104 91075296 -4197355 + B3 SINE B2 28 210 -6 1 1279 210 358 63 35 chr17 91076374 91076517 -4196134 - MIRm SINE MIR -66 202 57 1 1279 441 0 0 0 chr17 91077629 91077678 -4194973 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1279 585 52 0 0 chr17 91077852 91077929 -4194722 + (TAGA)n Simple_repeat Simple_repeat 3 79 0 1 1279 189 147 0 0 chr17 91078885 91078919 -4193732 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 1 1279 537 16 0 0 chr17 91079576 91079638 -4193013 + (GA)n Simple_repeat Simple_repeat 1 62 0 1 1279 4802 16 0 0 chr17 91081544 91082089 -4190562 + L1Md_A LINE L1 6037 6581 -1 1 1279 238 402 9 18 chr17 91082223 91082337 -4190314 - MIR SINE MIR -70 192 80 1 1279 259 213 0 62 chr17 91083435 91083515 -4189136 + MER4B-int LTR ERV1 1120 1194 -5564 1 1279 238 311 0 0 chr17 91083515 91083576 -4189075 + (TG)n Simple_repeat Simple_repeat 1 61 0 1 1279 642 161 76 0 chr17 91083961 91084079 -4188572 + B2_Mm2 SINE B2 1 127 -68 1 1279 243 88 0 0 chr17 91085478 91085512 -4187139 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 1 1279 852 29 0 0 chr17 91086064 91086167 -4186484 + (CA)n Simple_repeat Simple_repeat 2 104 0 1 1279 1105 70 7 0 chr17 91087053 91087196 -4185455 + B1_Mus1 SINE Alu 5 148 0 1 1279 302 68 68 14 chr17 91087199 91087273 -4185378 + (CAAAA)n Simple_repeat Simple_repeat 2 79 0 1 1279 287 286 92 11 chr17 91087273 91087457 -4185194 + L1M2 LINE L1 5283 5481 -702 1 1279 367 312 70 16 chr17 91087568 91087812 -4184839 + L1M2 LINE L1 5510 5766 -546 1 1279 731 284 54 72 chr17 91087850 91088127 -4184524 + B4 SINE B4 21 292 0 1 1279 195 69 0 0 chr17 91088131 91088160 -4184491 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1279 460 312 63 49 chr17 91088276 91088562 -4184089 + L1MB1 LINE L1 5865 6154 -14 1 1279 558 0 0 0 chr17 91088731 91088793 -4183858 + (GA)n Simple_repeat Simple_repeat 1 62 0 1 1279 308 23 45 0 chr17 91088929 91088973 -4183678 + (TTTA)n Simple_repeat Simple_repeat 4 49 0 1 1279 611 339 11 0 chr17 91088995 91089178 -4183473 - B3 SINE B2 -31 185 1 1 1279 887 34 0 0 chr17 91089193 91089311 -4183340 - L1Md_A LINE L1 0 6582 6465 1 1279 357 24 0 0 chr17 91089579 91089621 -4183030 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1 1279 337 283 41 65 chr17 91090452 91090622 -4182029 - MER5A1 DNA MER1_type 0 166 1 1 1279 195 100 0 0 chr17 91092619 91092649 -4180002 + (CCA)n Simple_repeat Simple_repeat 3 32 0 1 1279 511 315 21 7 chr17 91092943 91093087 -4179564 + RSINE1 SINE B4 7 152 -13 1 1279 3591 57 0 19 chr17 91093764 91094231 -4178420 - L1_Mus1 LINE L1 -4 6563 6106 1 1280 495 0 0 0 chr17 91095506 91095561 -4177090 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1280 271 333 181 17 chr17 91098625 91098775 -4173876 + MIRc SINE MIR 2 175 -93 1 1280 426 20 0 0 chr17 91099081 91099132 -4173519 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 1 1280 239 136 73 29 chr17 91100314 91100382 -4172269 + T-rich Low_complexity Low_complexity 2 72 0 1 1280 320 94 0 19 chr17 91100813 91100867 -4171784 + (GGAAA)n Simple_repeat Simple_repeat 2 54 0 1 1280 26 30 0 0 chr17 91101054 91101087 -4171564 + AT_rich Low_complexity Low_complexity 1 33 0 1 1280 21 36 0 0 chr17 91102749 91102777 -4169874 + AT_rich Low_complexity Low_complexity 1 28 0 1 1280 380 227 153 10 chr17 91104815 91104913 -4167738 - PB1D10 SINE Alu 0 117 6 1 1280 438 20 0 0 chr17 91106473 91106524 -4166127 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 1 1280 999 78 14 0 chr17 91106581 91106722 -4165929 + B2_Mm2 SINE B2 5 147 -48 1 1280 466 323 61 56 chr17 91107105 91107302 -4165349 + B3A SINE B2 1 198 0 1 1280 30 27 0 0 chr17 91108936 91108973 -4163678 + AT_rich Low_complexity Low_complexity 1 37 0 1 1280 378 0 0 0 chr17 91111075 91111117 -4161534 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1280 186 43 0 0 chr17 91111569 91111592 -4161059 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 1 1280 2686 108 21 116 chr17 91112624 91113157 -4159494 + RLTR45 LTR ERVK 1 482 0 1 1280 222 376 27 75 chr17 91113180 91113367 -4159284 + MIR3 SINE MIR 19 196 -12 1 1280 187 257 67 67 chr17 91113473 91113548 -4159103 + L3 LINE CR1 3313 3387 -1102 1 1280 23 33 0 0 chr17 91114434 91114464 -4158187 + AT_rich Low_complexity Low_complexity 1 30 0 1 1280 573 134 289 10 chr17 91114678 91114747 -4157904 + Lx9 LINE L1 7382 7492 -152 1 1280 387 0 0 0 chr17 91114747 91114790 -4157861 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1280 351 113 0 0 chr17 91114792 91114845 -4157806 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1280 573 134 289 10 chr17 91114845 91114976 -4157675 + Lx9 LINE L1 7493 7638 -6 1 1280 347 0 0 23 chr17 91118805 91118849 -4153802 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1 1280 435 19 0 0 chr17 91120019 91120071 -4152580 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1280 663 301 137 25 chr17 91120452 91120899 -4151752 + Lx8 LINE L1 6968 7464 -9 1 1280 5017 66 11 0 chr17 91121478 91122117 -4150534 - L1_Mus1 LINE L1 0 6567 5922 1 1280 708 77 0 0 chr17 91122117 91122208 -4150443 + L1_Mus1 LINE L1 5817 5907 -660 1 1280 211 158 68 34 chr17 91122374 91122433 -4150218 + T-rich Low_complexity Low_complexity 2 62 0 1 1280 486 252 28 89 chr17 91122765 91122944 -4149707 + RMER17C LTR ERVK 1 168 -242 1 1280 543 102 0 0 chr17 91122951 91123039 -4149612 + (TG)n Simple_repeat Simple_repeat 2 89 0 1 1280 280 203 14 0 chr17 91123115 91123184 -4149467 + RMER17C LTR ERVK 309 378 -32 1 1280 243 0 0 0 chr17 91123327 91123354 -4149297 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1280 305 181 0 46 chr17 91123429 91123516 -4149135 + L1ME4a LINE L1 6040 6122 -2 1 1280 2315 15 0 0 chr17 91123539 91123807 -4148844 + L1_Mm LINE L1 3894 4161 -1722 1 1280 1054 80 0 0 chr17 91123896 91124034 -4148617 + B1_Mus1 SINE Alu 2 139 -9 1 1280 230 0 33 0 chr17 91124034 91124064 -4148587 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1280 183 80 0 0 chr17 91124162 91124187 -4148464 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 1 1280 1524 170 63 24 chr17 91126074 91126391 -4146260 + RMER17B LTR ERVK 1 261 -697 1 1280 222 37 0 0 chr17 91127581 91127608 -4145043 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1280 552 210 0 0 chr17 91128244 91128344 -4144307 + ORR1C2 LTR MaLR 1 100 -284 1 1280 215 374 12 0 chr17 91128345 91128428 -4144223 - B4A SINE B4 -207 85 2 1 1280 435 254 45 15 chr17 91128985 91129117 -4143534 - Lx7 LINE L1 -460 7236 7101 1 1280 297 0 0 0 chr17 91129887 91129920 -4142731 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1280 942 96 0 0 chr17 91130047 91130182 -4142469 + (TATATG)n Simple_repeat Simple_repeat 1 135 0 1 1280 200 345 143 0 chr17 91130346 91130555 -4142096 + L2 LINE L2 2612 2850 -569 1 1280 195 125 0 0 chr17 91130689 91130729 -4141922 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 1 1280 7424 5 0 0 chr17 91131274 91132100 -4140551 - L1Md_A LINE L1 0 6582 5757 1 1280 445 267 0 0 chr17 91132532 91132633 -4140018 - B1_Mur1 SINE Alu -8 141 41 1 1280 265 319 0 0 chr17 91132873 91132945 -4139706 + ID4 SINE ID 3 74 -9 1 1280 21 36 0 0 chr17 91133381 91133409 -4139242 + AT_rich Low_complexity Low_complexity 1 28 0 1 1280 249 282 59 0 chr17 91133922 91134007 -4138644 + L2a LINE L2 3334 3423 -3 1 1280 337 261 124 6 chr17 91137355 91137490 -4135161 - B1_Mur2 SINE Alu -1 148 2 1 1280 245 355 49 49 chr17 91137368 91137510 -4135141 - B4A SINE B4 -83 209 68 1 1280 30 59 0 0 chr17 91138110 91138161 -4134490 + AT_rich Low_complexity Low_complexity 1 51 0 1 1280 1040 106 0 43 chr17 91139258 91139446 -4133205 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1280 25 51 0 0 chr17 91139544 91139583 -4133068 + AT_rich Low_complexity Low_complexity 1 39 0 1 1280 1307 278 48 2 chr17 91140009 91140409 -4132242 + Lx7 LINE L1 6884 7301 -395 1 1280 203 197 12 50 chr17 91140431 91140511 -4132140 + T-rich Low_complexity Low_complexity 1 77 0 1 1280 21 36 0 0 chr17 91140605 91140633 -4132018 + AT_rich Low_complexity Low_complexity 1 28 0 1 1280 293 0 27 0 chr17 91140775 91140812 -4131839 + (TTATA)n Simple_repeat Simple_repeat 3 40 0 1 1280 284 280 107 36 chr17 91141423 91141619 -4131032 - L1MC4a LINE L1 -485 7397 7188 1 1280 962 211 104 26 chr17 91142552 91142859 -4129792 + Lx9 LINE L1 7313 7643 -1 1 1280 430 175 125 11 chr17 91142934 91143031 -4129620 - PB1D7 SINE Alu -1 126 23 1 1280 2446 124 39 35 chr17 91145097 91145531 -4127120 - Lx LINE L1 -2 6652 6217 1 1280 433 333 50 7 chr17 91145792 91145931 -4126720 - RSINE1 SINE B4 -18 147 3 1 1280 749 195 3 39 chr17 91146138 91146448 -4126203 + GA-rich Low_complexity Low_complexity 1 298 0 1 1280 325 350 79 26 chr17 91146542 91146771 -4125880 + MIR SINE MIR 6 246 -16 1 1280 30 0 0 0 chr17 91146956 91146986 -4125665 + AT_rich Low_complexity Low_complexity 1 30 0 2 1280 495 369 23 29 chr17 91150738 91151026 -4121625 + Lx8 LINE L1 7086 7371 -102 2 1280 446 49 0 16 chr17 91151026 91151088 -4121563 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1280 495 369 23 29 chr17 91151088 91151106 -4121545 + Lx8 LINE L1 7372 7389 -84 2 1280 26 0 0 0 chr17 91151186 91151212 -4121439 + AT_rich Low_complexity Low_complexity 1 26 0 2 1280 253 337 0 0 chr17 91151310 91151399 -4121252 + (TATATG)n Simple_repeat Simple_repeat 5 93 0 2 1280 612 327 0 41 chr17 91151399 91151571 -4121080 - RSINE1 SINE B4 0 165 1 2 1280 438 255 131 23 chr17 91151759 91151901 -4120750 - B3 SINE B2 -49 144 1 2 1280 36 40 0 0 chr17 91153070 91153120 -4119531 + AT_rich Low_complexity Low_complexity 1 50 0 2 1280 272 323 19 2 chr17 91153271 91153335 -4119316 + B4 SINE B4 33 97 -195 2 1280 1358 94 0 6 chr17 91153335 91153517 -4119134 + B2_Mm2 SINE B2 1 181 -14 2 1280 272 329 73 40 chr17 91153517 91153716 -4118935 + B4 SINE B4 79 273 -19 2 1280 204 40 0 0 chr17 91153719 91153744 -4118907 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 1280 337 221 33 0 chr17 91154909 91155031 -4117620 + (TA)n Simple_repeat Simple_repeat 2 127 0 2 1280 451 268 157 20 chr17 91155138 91155386 -4117265 - Tigger15a DNA TcMar -356 359 78 2 1280 310 267 19 9 chr17 91158658 91158788 -4113863 - L1_Rod LINE L1 -464 5827 5629 2 1280 201 364 8 76 chr17 91158983 91159114 -4113537 + MIRb SINE MIR 14 135 -133 2 1280 1903 176 121 88 chr17 91162317 91162828 -4109823 + RLTR24 LTR ERV1 2 529 0 2 1280 255 306 84 65 chr17 91163159 91163313 -4109338 + L2a LINE L2 3209 3416 -10 2 1280 381 269 43 73 chr17 91163434 91163667 -4108984 + Charlie1b DNA MER1_type 162 387 -136 2 1280 913 194 96 14 chr17 91165712 91165921 -4106730 - RLTR1 LTR ERV1 0 624 399 2 1280 327 182 47 66 chr17 91165913 91166019 -4106632 - RLTR1 LTR ERV1 -274 238 135 2 1280 1728 231 49 12 chr17 91166941 91167370 -4105281 + RLTR41 LTR ERV1 1 445 -1 2 1280 28 0 0 0 chr17 91167469 91167497 -4105154 + AT_rich Low_complexity Low_complexity 1 28 0 2 1280 1340 200 88 33 chr17 91168302 91168633 -4104018 + ORR1B2 LTR MaLR 19 367 0 2 1280 638 100 0 10 chr17 91169001 91169102 -4103549 + (TCC)n Simple_repeat Simple_repeat 3 102 0 2 1280 771 103 0 0 chr17 91169132 91169239 -4103412 - B2_Mm2 SINE B2 -88 107 1 2 1280 306 309 0 11 chr17 91169292 91169387 -4103264 - MTEa LTR MaLR -270 109 16 2 1280 1086 84 0 0 chr17 91170064 91170206 -4102445 + B1_Mus1 SINE Alu 1 142 -6 2 1280 435 179 0 28 chr17 91171210 91171319 -4101332 + CT-rich Low_complexity Low_complexity 4 109 0 2 1280 222 118 0 0 chr17 91171318 91171352 -4101299 + (T)n Simple_repeat Simple_repeat 1 34 0 2 1280 1140 62 0 0 chr17 91171353 91171498 -4101153 - B1_Mus2 SINE Alu -1 146 2 2 1280 640 252 29 0 chr17 91171503 91171642 -4101009 - B1_Mur1 SINE Alu -6 143 1 2 1280 334 319 162 8 chr17 91171657 91171774 -4100877 - B4A SINE B4 -84 208 74 2 1280 26 0 0 0 chr17 91172136 91172162 -4100489 + AT_rich Low_complexity Low_complexity 1 26 0 2 1280 3618 189 189 48 chr17 91172720 91173621 -4099030 + RLTR25B LTR ERVK 1 1028 0 2 1280 202 220 0 0 chr17 91173678 91173728 -4098923 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 1280 423 0 0 0 chr17 91176213 91176260 -4096391 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 1280 290 241 0 0 chr17 91176984 91177063 -4095588 + (TA)n Simple_repeat Simple_repeat 2 80 0 2 1280 189 0 0 0 chr17 91177063 91177084 -4095567 + (TC)n Simple_repeat Simple_repeat 2 22 0 2 1280 387 0 0 0 chr17 91177084 91177126 -4095525 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 1280 774 194 314 3 chr17 91177311 91177626 -4095025 - MTC LTR MaLR -8 413 1 2 1280 604 24 24 0 chr17 91177771 91177853 -4094798 + (TTATA)n Simple_repeat Simple_repeat 4 87 0 2 1280 1082 260 47 23 chr17 91179797 91180144 -4092507 - MTD LTR MaLR -6 413 6 2 1280 312 83 0 0 chr17 91180259 91180307 -4092344 + (TC)n Simple_repeat Simple_repeat 2 49 0 2 1280 4631 53 3 0 chr17 91181694 91182274 -4090377 + L1Md_F2 LINE L1 6001 6582 0 2 1280 474 323 46 36 chr17 91183122 91183318 -4089333 - B3A SINE B2 0 198 1 2 1280 290 110 36 24 chr17 91183608 91183692 -4088959 + A-rich Low_complexity Low_complexity 1 85 0 2 1280 860 129 7 0 chr17 91183836 91183983 -4088668 + (TCTA)n Simple_repeat Simple_repeat 1 148 0 2 1280 23 0 0 0 chr17 91184108 91184131 -4088520 + AT_rich Low_complexity Low_complexity 1 23 0 2 1280 229 244 33 44 chr17 91184252 91184342 -4088309 - L2a LINE L2 0 3426 3338 2 1280 417 310 25 19 chr17 91184510 91184668 -4087983 + B4A SINE B4 1 159 -133 2 1280 1351 181 68 75 chr17 91184692 91185105 -4087546 + RMER17C LTR ERVK 1 410 0 2 1280 220 143 0 23 chr17 91185121 91185164 -4087487 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 2 1280 189 0 0 0 chr17 91185297 91185318 -4087333 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 2 1280 422 202 23 35 chr17 91185357 91185444 -4087207 + PB1D9 SINE Alu 34 119 -1 2 1280 574 300 74 74 chr17 91185770 91186054 -4086597 - B4A SINE B4 -8 284 1 2 1280 2144 183 32 85 chr17 91186556 91187027 -4085624 + RLTR41 LTR ERV1 1 446 0 2 1280 1133 64 0 0 chr17 91187323 91187463 -4085188 + B1_Mm SINE Alu 2 141 -6 2 1280 216 86 0 0 chr17 91187466 91187501 -4085150 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1280 485 190 31 19 chr17 91188289 91188450 -4084201 + RMER17C LTR ERVK 112 274 -136 2 1280 225 375 51 14 chr17 91189127 91189265 -4083386 - MIR SINE MIR -10 252 110 2 1280 189 0 0 0 chr17 91189265 91189286 -4083365 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1280 2016 170 133 17 chr17 91189495 91189969 -4082682 - RLTR24 LTR ERV1 0 529 1 2 1280 546 322 126 14 chr17 91190898 91191263 -4081388 + RMER5 LTR ERV1 129 534 0 2 1280 1213 104 0 68 chr17 91193346 91193552 -4079099 - B2_Mm2 SINE B2 -2 193 2 2 1280 199 214 115 82 chr17 91193890 91194012 -4078639 - MIRb SINE MIR 0 268 143 2 1280 1758 190 3 64 chr17 91194449 91194809 -4077842 + L1VL1 LINE L1 194 531 -5891 2 1280 6432 93 77 23 chr17 91194787 91195066 -4077585 + L1_Mus3 LINE L1 5556 5829 -54 2 1280 913 108 58 0 chr17 91195066 91195205 -4077446 - B1_Mus2 SINE Alu 0 147 1 2 1280 6432 89 84 20 chr17 91195205 91195937 -4076714 + L1_Mus3 LINE L1 5830 6630 -8 2 1280 637 257 65 27 chr17 91197267 91197451 -4075200 + Lx7 LINE L1 6984 7174 -522 2 1280 279 0 0 0 chr17 91197465 91197496 -4075155 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1280 1086 236 154 7 chr17 91197571 91197870 -4074781 + Lx6 LINE L1 7116 7458 -2 2 1280 183 205 0 0 chr17 91199215 91199254 -4073397 + (TATG)n Simple_repeat Simple_repeat 2 40 0 2 1280 198 0 0 0 chr17 91199927 91199949 -4072702 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1280 209 50 0 91 chr17 91200293 91200337 -4072314 + (TTTTTG)n Simple_repeat Simple_repeat 1 40 0 2 1280 186 71 0 0 chr17 91201427 91201455 -4071196 + (A)n Simple_repeat Simple_repeat 1 28 0 2 1280 3080 123 135 8 chr17 91201526 91202059 -4070592 + MT2B LTR ERVL 1 601 0 2 1280 198 0 0 0 chr17 91202169 91202191 -4070460 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 2 1280 291 280 112 15 chr17 91202245 91202379 -4070272 - B1F1 SINE Alu -1 148 2 2 1280 2045 24 0 35 chr17 91202555 91202816 -4069835 - L1Md_F3 LINE L1 -3 6581 6330 2 1280 212 154 0 19 chr17 91203047 91203094 -4069557 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 1280 459 0 0 0 chr17 91203094 91203145 -4069506 + (GA)n Simple_repeat Simple_repeat 2 52 0 2 1280 207 0 0 0 chr17 91204823 91204846 -4067805 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 1280 495 73 0 0 chr17 91204846 91204914 -4067737 + (GA)n Simple_repeat Simple_repeat 2 69 0 2 1280 183 42 0 0 chr17 91205930 91205954 -4066697 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 2 1280 785 280 102 8 chr17 91206533 91206799 -4065852 - B4A SINE B4 0 292 2 2 1280 240 111 0 0 chr17 91206958 91206994 -4065657 + (T)n Simple_repeat Simple_repeat 1 36 0 2 1280 194 231 0 0 chr17 91207830 91207869 -4064782 + L2b LINE L2 3318 3356 -19 2 1280 227 343 0 0 chr17 91208171 91208275 -4064376 + GA-rich Low_complexity Low_complexity 1 104 0 2 1280 33 0 0 0 chr17 91208881 91208914 -4063737 + AT_rich Low_complexity Low_complexity 1 33 0 2 1280 198 0 0 0 chr17 91208942 91208964 -4063687 + (TGGGGG)n Simple_repeat Simple_repeat 6 27 0 2 1280 367 255 75 9 chr17 91208965 91209072 -4063579 + RSINE1 SINE B4 14 127 -38 2 1280 22 0 0 0 chr17 91209473 91209495 -4063156 + AT_rich Low_complexity Low_complexity 1 22 0 2 1280 288 0 0 0 chr17 91209661 91209693 -4062958 + (TC)n Simple_repeat Simple_repeat 2 33 0 2 1280 347 60 0 20 chr17 91209693 91209743 -4062908 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1280 514 292 81 34 chr17 91209761 91209995 -4062656 - B4A SINE B4 0 292 48 2 1280 273 287 0 44 chr17 91210477 91210568 -4062083 + MLT1A1 LTR MaLR 318 404 -4 2 1280 2438 118 5 8 chr17 91210578 91210962 -4061689 + Lx2 LINE L1 5780 6162 -835 2 1280 1311 246 80 23 chr17 91211242 91211592 -4061059 + ORR1D1 LTR MaLR 5 374 0 2 1280 280 291 47 14 chr17 91211622 91211759 -4060892 - MIR SINE MIR -48 220 80 2 1280 324 0 0 0 chr17 91213633 91213669 -4058982 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 1280 486 321 36 62 chr17 91213740 91214098 -4058553 - L1MA8 LINE L1 -220 6071 5723 2 1280 493 276 103 0 chr17 91214171 91214356 -4058295 - L1MA8 LINE L1 -760 5540 5337 2 1280 28 29 0 0 chr17 91216791 91216826 -4055825 + AT_rich Low_complexity Low_complexity 1 35 0 3 1280 578 191 85 43 chr17 91218089 91218253 -4054398 - ORR1D1 LTR MaLR 0 329 159 3 1280 563 200 17 23 chr17 91218254 91218428 -4054223 + GA-rich Low_complexity Low_complexity 3 175 0 3 1280 823 191 57 11 chr17 91218428 91218603 -4054048 - ORR1D1 LTR MaLR -191 183 1 3 1280 423 0 0 0 chr17 91218643 91218690 -4053961 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 1280 189 0 0 0 chr17 91218937 91218958 -4053693 + (TC)n Simple_repeat Simple_repeat 2 22 0 3 1280 666 248 25 13 chr17 91222849 91223008 -4049643 + B3 SINE B2 2 162 -54 3 19 29039 122 8 16 chr17 91223903 91229601 -4043050 - L1_Mus2 LINE L1 0 6566 932 3 1281 2325 125 75 60 chr17 91229601 91230069 -4042582 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1281 2583 175 5 96 chr17 91230069 91230337 -4042314 - L1_Mus2 LINE L1 -5685 931 667 3 1281 205 318 63 0 chr17 91231004 91231067 -4041584 - L2a LINE L2 -16 3410 3344 3 1281 228 359 13 0 chr17 91231688 91231766 -4040885 + RSINE1 SINE B4 9 87 -78 3 1281 582 196 0 22 chr17 91233324 91233460 -4039191 + Lx9 LINE L1 7505 7637 -7 3 1281 35 63 0 0 chr17 91233462 91233525 -4039126 + AT_rich Low_complexity Low_complexity 1 63 0 3 1281 1308 195 17 0 chr17 91234105 91234341 -4038310 + RLTR14 LTR ERV1 3 242 -140 3 1281 5532 77 12 28 chr17 91234668 91235445 -4037206 + L1_Mus2 LINE L1 5803 6566 0 3 1281 264 30 0 0 chr17 91235794 91235827 -4036824 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 3 1281 191 36 0 35 chr17 91237224 91237253 -4035398 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 1281 399 167 52 9 chr17 91237262 91237377 -4035274 + Lx9 LINE L1 7524 7643 -1 3 1281 32 0 0 0 chr17 91237438 91237470 -4035181 + AT_rich Low_complexity Low_complexity 1 32 0 3 1281 1249 281 69 41 chr17 91238571 91238964 -4033687 - MTD LTR MaLR -15 404 1 3 1281 2551 260 206 31 chr17 91238967 91240034 -4032617 - MTD-int LTR MaLR -3 1255 2 3 1281 1530 286 21 48 chr17 91240035 91240454 -4032197 - MTD LTR MaLR 0 419 12 3 1281 378 0 0 0 chr17 91240820 91240862 -4031789 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1281 426 39 0 0 chr17 91240862 91240914 -4031737 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 1281 262 230 93 13 chr17 91245106 91245181 -4027470 + B4 SINE B4 2 82 -210 3 1281 275 348 57 94 chr17 91245761 91246090 -4026561 + MTEa LTR MaLR 26 365 -9 3 1281 1238 107 32 5 chr17 91246903 91247091 -4025560 + B2_Mm2 SINE B2 1 193 -2 3 1281 7116 95 18 12 chr17 91247292 91248383 -4024268 + L1_Mus3 LINE L1 5538 6635 -3 3 1281 432 0 0 0 chr17 91248756 91248804 -4023847 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1281 287 200 13 0 chr17 91249915 91249990 -4022661 + Lx6 LINE L1 7359 7434 -26 3 1281 21 0 0 0 chr17 91250001 91250022 -4022629 + AT_rich Low_complexity Low_complexity 1 21 0 3 1281 315 0 0 0 chr17 91251112 91251147 -4021504 + (TC)n Simple_repeat Simple_repeat 2 36 0 3 1281 457 344 82 58 chr17 91252453 91252830 -4019821 + MLT1B LTR MaLR 1 386 -4 3 1281 643 286 0 7 chr17 91252850 91252991 -4019660 + B1_Mur2 SINE Alu 10 149 0 3 1281 207 0 0 0 chr17 91253898 91253921 -4018730 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 1281 1086 95 0 0 chr17 91254649 91254797 -4017854 + B1_Mus1 SINE Alu 1 148 0 3 1281 441 0 0 0 chr17 91255362 91255411 -4017240 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1281 342 0 0 0 chr17 91255411 91255448 -4017203 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 1281 222 118 0 0 chr17 91256485 91256519 -4016132 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1281 213 175 0 0 chr17 91257275 91257315 -4015336 + (TATATG)n Simple_repeat Simple_repeat 6 45 0 3 1281 307 303 70 6 chr17 91257711 91257891 -4014760 - L1MEg LINE L1 -2909 3237 3073 3 1281 1084 84 0 7 chr17 91257894 91258038 -4014613 - B1_Mus2 SINE Alu 0 147 5 3 1281 305 250 83 74 chr17 91258319 91258440 -4014211 + MT2B LTR ERVL 143 264 -337 3 1281 723 150 110 0 chr17 91258343 91258470 -4014181 + B1_Mur3 SINE Alu 9 149 0 3 1281 2695 196 80 88 chr17 91258756 91259315 -4013336 - RMER17B LTR ERVK 0 958 435 3 1281 1094 78 7 0 chr17 91259315 91259469 -4013182 + (GA)n Simple_repeat Simple_repeat 2 156 0 3 1281 2695 196 80 88 chr17 91259469 91259763 -4012888 - RMER17B LTR ERVK -524 434 112 3 1281 227 73 49 0 chr17 91260801 91260842 -4011809 + (CAAAA)n Simple_repeat Simple_repeat 4 46 0 3 1281 535 306 6 17 chr17 91261041 91261217 -4011434 + MER20 DNA MER1_type 40 213 -6 3 1281 333 0 0 0 chr17 91261249 91261286 -4011365 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1281 658 259 47 4 chr17 91262190 91262423 -4010228 - Lx9 LINE L1 -2 7642 7400 3 1281 411 21 0 0 chr17 91262429 91262477 -4010174 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1281 322 345 46 6 chr17 91262489 91262664 -4009987 - B3A SINE B2 -16 182 1 3 1281 252 0 0 0 chr17 91264098 91264126 -4008525 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 3 1281 302 333 102 6 chr17 91264327 91264484 -4008167 - MLT1A0 LTR MaLR -191 174 3 3 1281 315 0 0 0 chr17 91264652 91264687 -4007964 + (TC)n Simple_repeat Simple_repeat 1 35 0 3 1281 195 42 0 0 chr17 91265118 91265142 -4007509 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 3 1281 968 117 7 0 chr17 91266538 91266683 -4005968 + B1_Mus2 SINE Alu 1 146 -1 3 1281 248 220 20 0 chr17 91266755 91266805 -4005846 + G-rich Low_complexity Low_complexity 6 56 0 3 1281 318 135 0 0 chr17 91266881 91266933 -4005718 + MusHAL1 LINE L1 2144 2195 -517 3 1281 831 100 20 7 chr17 91266933 91267084 -4005567 + L1_Mus3 LINE L1 6486 6638 0 3 1281 423 0 0 0 chr17 91267118 91267165 -4005486 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1281 346 259 24 12 chr17 91267695 91267777 -4004874 + B4 SINE B4 1 83 -209 3 1281 205 273 0 0 chr17 91267991 91268046 -4004605 + (CATATA)n Simple_repeat Simple_repeat 4 58 0 3 1281 263 250 67 112 chr17 91268261 91268420 -4004231 + MLT1C LTR MaLR 341 502 -3 3 1281 26 30 0 0 chr17 91268760 91268793 -4003858 + AT_rich Low_complexity Low_complexity 1 33 0 3 1281 2209 41 0 0 chr17 91268802 91269069 -4003582 + L1Md_A LINE L1 6316 6582 0 3 1281 323 282 0 14 chr17 91269843 91269915 -4002736 + PB1D10 SINE Alu 10 80 -37 3 1281 475 289 30 0 chr17 91270735 91270870 -4001781 - B1F SINE Alu -6 143 5 3 1281 22 0 0 0 chr17 91271646 91271668 -4000983 + AT_rich Low_complexity Low_complexity 1 22 0 3 1281 275 353 35 0 chr17 91272463 91272548 -4000103 - LFSINE_Vert SINE SINE -270 189 102 3 1281 769 244 70 33 chr17 91273581 91273852 -3998799 - B4A SINE B4 -8 284 4 3 1281 23 0 0 0 chr17 91275476 91275499 -3997152 + AT_rich Low_complexity Low_complexity 1 23 0 3 1281 619 144 16 0 chr17 91276525 91276650 -3996001 + (TA)n Simple_repeat Simple_repeat 1 127 0 3 1281 1768 295 59 57 chr17 91276650 91276712 -3995939 - RCHARR1 DNA MER1_type -65 909 861 3 1281 1615 40 0 0 chr17 91276712 91276911 -3995740 + L1_Mus1 LINE L1 6369 6567 0 3 1281 1784 295 59 57 chr17 91276911 91277710 -3994941 - RCHARR1 DNA MER1_type -110 864 46 3 1281 1015 198 157 27 chr17 91278420 91278758 -3993893 - MTD LTR MaLR 0 419 38 3 1281 483 288 145 52 chr17 91279643 91279815 -3992836 + B3 SINE B2 21 208 -8 3 1281 1874 138 54 9 chr17 91279896 91280211 -3992440 - Lx2 LINE L1 -2 6995 6667 3 1281 361 155 0 0 chr17 91281520 91281578 -3991073 + HAL1-3A_ME LINE L1 1971 2028 -830 3 1281 300 143 0 0 chr17 91281645 91281701 -3990950 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 1281 663 318 94 15 chr17 91281701 91282158 -3990493 + L1M3 LINE L1 3452 3944 -2196 3 1281 6962 184 18 0 chr17 91282277 91282334 -3990317 + Lx2 LINE L1 4571 4627 -1256 3 1281 243 0 0 0 chr17 91282334 91282361 -3990290 + (CAA)n Simple_repeat Simple_repeat 2 28 0 3 1281 6962 161 23 0 chr17 91282361 91283851 -3988800 + Lx2 LINE L1 4628 6159 -838 3 1281 1098 110 52 0 chr17 91283842 91284015 -3988636 + Lx2 LINE L1 6790 6971 -26 3 1281 225 0 0 0 chr17 91284015 91284040 -3988611 + (TAAAA)n Simple_repeat Simple_repeat 3 27 0 3 1281 233 311 25 0 chr17 91284289 91284408 -3988243 + L1M3 LINE L1 4571 4692 -1448 3 1281 2843 3 0 0 chr17 91284692 91285011 -3987640 - L1Md_A LINE L1 0 6582 6264 3 1281 215 369 152 14 chr17 91285554 91285771 -3986880 + MIR SINE MIR 15 261 -1 3 1281 450 154 0 0 chr17 91286054 91286132 -3986519 + CT-rich Low_complexity Low_complexity 3 80 0 3 1281 1724 168 12 58 chr17 91286219 91286561 -3986090 + ORR1A3 LTR MaLR 1 326 0 3 1281 29 47 0 0 chr17 91286741 91286784 -3985867 + AT_rich Low_complexity Low_complexity 1 43 0 3 1281 246 125 0 0 chr17 91289368 91289416 -3983235 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1281 1464 321 129 25 chr17 91289416 91290061 -3982590 + MER21B LTR ERV1 23 734 -129 3 1281 656 312 30 0 chr17 91290571 91290773 -3981878 - B3 SINE B2 -5 211 4 3 1281 182 339 101 0 chr17 91291091 91291200 -3981451 - L2 LINE L2 -1302 2117 1998 3 1281 23 54 0 0 chr17 91291617 91291654 -3980997 + AT_rich Low_complexity Low_complexity 1 37 0 3 1281 201 128 51 0 chr17 91292288 91292327 -3980324 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 3 1281 265 346 78 21 chr17 91292588 91292871 -3979780 + L1M5 LINE L1 5562 5860 -313 3 1281 270 196 18 18 chr17 91293245 91293302 -3979349 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 3 1281 572 297 118 35 chr17 91293858 91294316 -3978335 + L1M5 LINE L1 5271 5779 -400 3 1281 849 92 0 0 chr17 91294542 91294662 -3977989 + (TTCC)n Simple_repeat Simple_repeat 3 122 0 3 1281 837 181 0 21 chr17 91294957 91295098 -3977553 - B1_Mur3 SINE Alu -7 142 5 3 1281 243 0 0 0 chr17 91295440 91295467 -3977184 + (TA)n Simple_repeat Simple_repeat 1 27 0 3 1281 378 42 0 0 chr17 91295467 91295514 -3977137 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1281 294 29 0 0 chr17 91295517 91295552 -3977099 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1281 522 248 143 0 chr17 91295563 91295696 -3976955 - B3A SINE B2 -42 156 5 4 1281 241 326 0 0 chr17 91296270 91296362 -3976289 + (CTGGGG)n Simple_repeat Simple_repeat 5 96 0 4 1281 22 70 0 0 chr17 91299568 91299611 -3973040 + AT_rich Low_complexity Low_complexity 1 43 0 4 1281 341 280 97 15 chr17 91299746 91299880 -3972771 + B4A SINE B4 140 284 -8 4 1281 26 50 0 0 chr17 91299988 91300028 -3972623 + AT_rich Low_complexity Low_complexity 1 40 0 4 1281 6666 79 21 2 chr17 91300832 91301765 -3970886 + Lx3_Mus LINE L1 6050 7002 -7 4 1281 207 0 0 0 chr17 91301765 91301788 -3970863 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 4 1281 200 35 35 0 chr17 91301820 91301849 -3970802 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 1281 399 276 39 149 chr17 91302415 91302696 -3969955 + MLT1B LTR MaLR 46 295 -95 4 1281 1045 78 0 7 chr17 91303023 91303165 -3969486 - B1_Mus1 SINE Alu -6 142 2 4 1281 1149 140 6 6 chr17 91303217 91303397 -3969254 - B2_Mm2 SINE B2 -15 180 1 4 1281 21 36 0 0 chr17 91303401 91303429 -3969222 + AT_rich Low_complexity Low_complexity 1 28 0 4 1281 24 0 0 0 chr17 91303716 91303740 -3968911 + AT_rich Low_complexity Low_complexity 1 24 0 4 1281 40 59 0 0 chr17 91304188 91304256 -3968395 + AT_rich Low_complexity Low_complexity 1 68 0 4 1281 671 297 19 24 chr17 91305035 91305242 -3967409 - B3 SINE B2 -10 206 1 4 1281 21 57 0 0 chr17 91305986 91306021 -3966630 + AT_rich Low_complexity Low_complexity 1 35 0 4 1281 7366 108 19 23 chr17 91306021 91307163 -3965488 - Lx3B LINE L1 -2 6971 5834 4 1281 306 0 0 0 chr17 91307464 91307498 -3965153 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1281 426 39 0 0 chr17 91307498 91307549 -3965102 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 1281 465 103 0 0 chr17 91307937 91308005 -3964646 + (CA)n Simple_repeat Simple_repeat 2 69 0 4 1281 237 276 142 25 chr17 91308431 91308628 -3964023 + MER110A LTR ERV1 132 351 -117 4 1281 23 0 0 0 chr17 91309053 91309076 -3963575 + AT_rich Low_complexity Low_complexity 1 23 0 4 1281 210 143 0 0 chr17 91309849 91309884 -3962767 + (T)n Simple_repeat Simple_repeat 1 35 0 4 1281 225 0 0 0 chr17 91313230 91313255 -3959396 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 4 1281 527 287 63 19 chr17 91314682 91314888 -3957763 + B3 SINE B2 2 216 0 4 1281 1389 61 0 0 chr17 91315429 91315609 -3957042 + (TTTTC)n Simple_repeat Simple_repeat 1 180 0 4 1281 4889 148 77 18 chr17 91315609 91316493 -3956158 - Lx LINE L1 -12 6642 5706 4 1281 261 0 0 0 chr17 91316919 91316948 -3955703 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 1281 312 246 46 0 chr17 91316954 91317019 -3955632 - B4A SINE B4 -10 282 215 4 1281 880 204 313 59 chr17 91317794 91318233 -3954418 + RLTR20C LTR ERVK 1 551 0 4 1281 23 0 0 0 chr17 91318720 91318743 -3953908 + AT_rich Low_complexity Low_complexity 1 23 0 4 1281 359 208 0 8 chr17 91319534 91319660 -3952991 + CT-rich Low_complexity Low_complexity 2 126 0 4 1281 634 321 5 44 chr17 91319931 91320136 -3952515 + B3A SINE B2 2 198 0 4 1281 1151 75 0 0 chr17 91320144 91320290 -3952361 + B1_Mm SINE Alu 1 146 -1 4 1281 227 367 13 0 chr17 91320621 91320700 -3951951 + ID4 SINE ID 3 82 -1 4 1281 1109 83 0 0 chr17 91320899 91321044 -3951607 + B1_Mm SINE Alu 3 147 0 4 1281 195 42 0 0 chr17 91321044 91321068 -3951583 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1281 186 133 0 0 chr17 91321732 91321762 -3950889 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 4 1281 351 65 0 0 chr17 91322222 91322268 -3950383 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 4 1281 185 341 96 22 chr17 91322348 91322483 -3950168 - MIRb SINE MIR -35 233 89 4 1281 559 240 66 0 chr17 91322754 91322776 -3949875 + B3 SINE B2 2 30 -186 4 1281 3831 72 12 8 chr17 91322776 91323292 -3949359 + L1Md_F2 LINE L1 6064 6581 -1 4 1281 559 240 66 0 chr17 91323292 91323390 -3949261 + B3 SINE B2 31 129 -87 4 1281 21 36 0 0 chr17 91323420 91323448 -3949203 + AT_rich Low_complexity Low_complexity 1 28 0 4 1281 180 322 121 9 chr17 91325328 91325444 -3947207 - MIR SINE MIR -7 255 127 4 1281 252 0 0 0 chr17 91325454 91325482 -3947169 + (TTA)n Simple_repeat Simple_repeat 1 28 0 4 1281 221 57 29 0 chr17 91325482 91325517 -3947134 + (TAG)n Simple_repeat Simple_repeat 3 38 0 4 1281 202 143 0 23 chr17 91325585 91325628 -3947023 + (TAA)n Simple_repeat Simple_repeat 2 43 0 4 1281 1822 213 12 186 chr17 91326747 91327487 -3945164 + RMER19C LTR ERVK 1 611 0 4 1281 787 308 71 57 chr17 91327668 91328105 -3944546 + MT2A LTR ERVL 19 461 -72 4 1281 535 282 72 24 chr17 91328350 91328557 -3944094 - ID_B1 SINE B4 -2 222 6 4 1281 1480 88 13 4 chr17 91328778 91329005 -3943646 - L1_Mus3 LINE L1 0 6638 6410 4 1281 23 0 0 0 chr17 91329796 91329819 -3942832 + AT_rich Low_complexity Low_complexity 1 23 0 4 1281 756 301 5 39 chr17 91330769 91330973 -3941678 - B3 SINE B2 0 216 20 4 1281 23 0 0 0 chr17 91331020 91331043 -3941608 + AT_rich Low_complexity Low_complexity 1 23 0 4 1281 243 0 0 0 chr17 91334019 91334046 -3938605 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1281 351 289 21 0 chr17 91334049 91334146 -3938505 - PB1D9 SINE Alu -21 99 1 4 1281 200 35 35 0 chr17 91335380 91335409 -3937242 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 4 1281 846 321 110 16 chr17 91335786 91336150 -3936501 + MLT2C2 LTR ERVL 19 416 -48 4 1281 405 368 0 0 chr17 91336207 91336370 -3936281 + (CA)n Simple_repeat Simple_repeat 2 164 0 4 1281 1987 140 9 60 chr17 91336624 91336959 -3935692 - ORR1A3 LTR MaLR 0 326 9 4 1281 9914 150 60 14 chr17 91336967 91338844 -3933807 - ORR1A3-int LTR MaLR 0 1963 1 4 1281 1863 151 27 54 chr17 91338844 91339179 -3933472 - ORR1A3 LTR MaLR 0 326 1 4 1281 946 104 8 0 chr17 91339290 91339424 -3933227 - B2_Mm2 SINE B2 -34 161 27 4 1281 378 61 0 0 chr17 91340272 91340321 -3932330 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 1281 5493 194 37 16 chr17 91340873 91342092 -3930559 + Lx6 LINE L1 4564 5807 -73 4 1281 405 0 0 0 chr17 91342366 91342411 -3930240 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1281 596 234 41 12 chr17 91342492 91342661 -3929990 + Lx6 LINE L1 5776 5949 -1511 4 1281 2673 280 47 27 chr17 91342657 91342755 -3929896 + Lx6 LINE L1 6633 6740 -720 4 1281 190 0 0 62 chr17 91342755 91342787 -3929864 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 4 1281 2673 280 47 27 chr17 91342787 91343334 -3929317 + Lx6 LINE L1 6741 7300 -160 4 1281 2310 192 120 75 chr17 91343334 91344019 -3928632 + RMER6D LTR ERVK 1 716 -4 4 1281 2673 280 47 27 chr17 91344019 91344182 -3928469 + Lx6 LINE L1 7301 7457 -3 4 1281 29 110 0 0 chr17 91344242 91344369 -3928282 + AT_rich Low_complexity Low_complexity 1 127 0 4 1281 228 289 75 32 chr17 91344565 91344658 -3927993 - ID4 SINE ID -50 102 6 4 1281 1695 58 0 13 chr17 91344762 91344990 -3927661 - L1Md_F2 LINE L1 -12 6570 6346 4 1281 6267 48 0 0 chr17 91344990 91346097 -3926554 + L1Md_F2 LINE L1 5231 6337 -245 4 1281 511 361 64 60 chr17 91346202 91346791 -3925860 + MER99 DNA hAT? 194 784 -47 4 1281 580 308 26 0 chr17 91346791 91346986 -3925665 + B3 SINE B2 2 201 -15 4 1281 510 303 102 11 chr17 91347360 91347537 -3925114 + B3A SINE B2 1 193 -5 4 1281 665 248 0 7 chr17 91348077 91348227 -3924424 - B1_Mur4 SINE Alu -1 149 1 4 1281 24 53 0 0 chr17 91348307 91348345 -3924306 + AT_rich Low_complexity Low_complexity 1 38 0 4 1281 244 342 128 68 chr17 91348853 91349088 -3923563 + MER67C LTR ERV1 171 419 -292 4 1281 426 271 24 24 chr17 91349298 91349423 -3923228 + RSINE1 SINE B4 3 127 -38 4 1281 420 20 0 0 chr17 91349468 91349517 -3923134 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 1281 288 388 56 12 chr17 91350020 91350182 -3922469 - B3A SINE B2 0 216 48 4 1281 1990 184 149 27 chr17 91350475 91350766 -3921885 + RMER6A LTR ERVK 1 328 -428 4 1281 715 21 11 11 chr17 91350766 91350860 -3921791 + (GA)n Simple_repeat Simple_repeat 1 94 0 4 1281 1990 171 166 20 chr17 91350860 91351131 -3921520 + RMER6A LTR ERVK 307 615 -141 4 1281 341 319 105 30 chr17 91351294 91351627 -3921024 - L1MA6 LINE L1 -21 6279 5922 4 1281 31 0 0 0 chr17 91351668 91351699 -3920952 + AT_rich Low_complexity Low_complexity 1 31 0 4 1281 296 343 11 87 chr17 91352966 91353151 -3919500 + RLTR18 LTR ERVK 135 305 -311 4 1281 950 211 19 19 chr17 91354092 91354300 -3918351 - B3 SINE B2 -8 208 1 4 1281 326 307 34 48 chr17 91354951 91355098 -3917553 - L1MB5 LINE L1 -109 6065 5921 4 1281 366 304 119 9 chr17 91355293 91355512 -3917139 - L1M4 LINE L1 -1743 4403 4161 4 1281 22 56 0 0 chr17 91355531 91355567 -3917084 + AT_rich Low_complexity Low_complexity 1 36 0 4 1281 701 298 21 30 chr17 91356680 91356915 -3915736 - MT2A LTR ERVL -236 297 65 4 1281 275 277 36 0 chr17 91356845 91356928 -3915723 - MTE2a LTR MaLR -242 137 52 4 160 1964 149 135 36 chr17 91357062 91357500 -3915151 + Lx2 LINE L1 6516 6996 -1 4 1282 860 161 0 32 chr17 91358017 91358203 -3914448 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1282 237 316 40 0 chr17 91358667 91358743 -3913908 + ID4 SINE ID 2 80 -3 4 1282 183 80 0 0 chr17 91358870 91358895 -3913756 + (CAAAAA)n Simple_repeat Simple_repeat 5 29 0 4 1282 23 54 0 0 chr17 91359114 91359151 -3913500 + AT_rich Low_complexity Low_complexity 1 37 0 4 1282 399 21 0 0 chr17 91359160 91359208 -3913443 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 1282 510 17 0 0 chr17 91359208 91359266 -3913385 + (GA)n Simple_repeat Simple_repeat 1 59 0 4 1282 411 259 0 0 chr17 91359389 91359474 -3913177 - MTD LTR MaLR -275 144 60 4 1282 273 209 31 52 chr17 91359474 91359570 -3913081 + GA-rich Low_complexity Low_complexity 4 97 0 4 1282 243 177 16 0 chr17 91360395 91360438 -3912213 + T-rich Low_complexity Low_complexity 22 65 0 4 1282 1202 35 7 0 chr17 91360438 91360582 -3912069 - B1_Mm SINE Alu 0 147 3 4 1282 243 177 16 0 chr17 91360582 91360600 -3912051 + T-rich Low_complexity Low_complexity 4 21 0 5 1282 574 326 67 31 chr17 91360667 91360860 -3911791 - ID_B1 SINE B4 -20 204 5 5 1282 333 327 53 0 chr17 91361112 91361279 -3911372 - L2a LINE L2 -219 3207 3030 5 1282 346 315 37 9 chr17 91361654 91361763 -3910888 - ID_B1 SINE B4 -8 216 105 5 1282 1065 106 29 0 chr17 91362143 91362313 -3910338 + RMER19A LTR ERVK 1 175 -562 5 1282 27043 160 19 10 chr17 91362321 91365708 -3906943 + L1_Mus3 LINE L1 416 3816 -2067 5 1282 2564 49 0 185 chr17 91365708 91366156 -3906495 + RLTR10B2 LTR ERVK 1 365 0 5 1282 27043 124 24 7 chr17 91366156 91368922 -3903729 + L1_Mus3 LINE L1 3817 6636 -2 5 1282 1912 164 84 13 chr17 91368922 91369423 -3903228 + RMER19A LTR ERVK 160 737 0 5 1282 332 321 61 54 chr17 91370609 91370741 -3901910 + B1_Mur2 SINE Alu 1 136 -13 5 1282 186 43 0 0 chr17 91370741 91370764 -3901887 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 5 1282 332 321 61 54 chr17 91370764 91370779 -3901872 + B1_Mur2 SINE Alu 137 149 0 5 1282 196 283 91 40 chr17 91372365 91372513 -3900138 + MIRm SINE MIR 11 165 -43 5 1282 1042 102 7 0 chr17 91373172 91373319 -3899332 + B1_Mus1 SINE Alu 1 148 0 5 1282 1123 68 7 0 chr17 91374711 91374857 -3897794 + B1_Mm SINE Alu 1 147 0 5 1282 459 0 0 0 chr17 91375207 91375258 -3897393 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1282 6553 105 3 24 chr17 91376111 91377088 -3895563 - L1_Mus3 LINE L1 -4 6634 5678 5 1282 15020 149 15 2 chr17 91377083 91379631 -3893020 + L1_Mus3 LINE L1 3083 5664 -219 5 1282 207 0 0 0 chr17 91379662 91379685 -3892966 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1282 620 296 29 5 chr17 91379946 91380153 -3892498 + ID_B1 SINE B4 2 213 -11 5 1282 441 0 0 0 chr17 91380180 91380229 -3892422 + (CATA)n Simple_repeat Simple_repeat 4 52 0 5 1282 249 328 119 17 chr17 91380540 91380658 -3891993 - MIRb SINE MIR -75 193 60 5 1282 306 264 209 0 chr17 91384297 91384407 -3888244 - B1F SINE Alu 0 149 17 5 1282 255 61 0 0 chr17 91384863 91384896 -3887755 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 1282 22 56 0 0 chr17 91385190 91385226 -3887425 + AT_rich Low_complexity Low_complexity 1 36 0 5 1282 337 344 50 116 chr17 91385931 91386250 -3886401 + MLT1A0 LTR MaLR 68 365 0 5 1282 213 292 10 59 chr17 91387336 91387438 -3885213 - L2a LINE L2 -61 3365 3269 5 1282 23 0 0 0 chr17 91387625 91387648 -3885003 + AT_rich Low_complexity Low_complexity 1 23 0 5 1282 402 21 0 0 chr17 91387724 91387771 -3884880 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1282 477 161 0 0 chr17 91391905 91391992 -3880659 + A-rich Low_complexity Low_complexity 1 87 0 5 1282 268 213 239 3 chr17 91392366 91392457 -3880194 - PB1D10 SINE Alu -7 110 1 5 1282 24 0 0 0 chr17 91393114 91393138 -3879513 + AT_rich Low_complexity Low_complexity 1 24 0 5 1282 221 277 46 0 chr17 91393812 91393877 -3878774 + B1_Mur4 SINE Alu 43 110 -40 5 1282 404 123 0 14 chr17 91394346 91394420 -3878231 + (GAAA)n Simple_repeat Simple_repeat 4 76 0 5 1282 243 0 0 0 chr17 91394459 91394486 -3878165 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 5 1282 29 28 0 0 chr17 91395598 91395634 -3877017 + AT_rich Low_complexity Low_complexity 1 36 0 5 1282 23 68 0 0 chr17 91396186 91396230 -3876421 + AT_rich Low_complexity Low_complexity 1 44 0 5 1282 23 0 0 0 chr17 91400727 91400750 -3871901 + AT_rich Low_complexity Low_complexity 1 23 0 5 1282 2927 124 4 18 chr17 91401866 91402368 -3870283 - L1_Mur1 LINE L1 -3535 2351 1857 5 1282 6568 98 30 4 chr17 91402369 91403442 -3869209 + Lx3B LINE L1 4883 5979 -994 5 1282 5324 126 29 19 chr17 91403439 91404316 -3868335 + Lx3B LINE L1 6084 6968 -5 5 1282 240 35 0 0 chr17 91404322 91404351 -3868300 + (CTA)n Simple_repeat Simple_repeat 1 29 0 5 1282 23 54 0 0 chr17 91404351 91404388 -3868263 + AT_rich Low_complexity Low_complexity 1 37 0 5 1282 952 91 0 0 chr17 91404596 91404728 -3867923 + B1_Mus2 SINE Alu 15 146 -1 5 1282 310 312 81 34 chr17 91405944 91406093 -3866558 - MER3 DNA MER1_type -53 156 1 5 1282 22 56 0 0 chr17 91406191 91406227 -3866424 + AT_rich Low_complexity Low_complexity 1 36 0 5 1282 22 35 0 0 chr17 91406276 91406305 -3866346 + AT_rich Low_complexity Low_complexity 1 29 0 5 1282 631 277 120 45 chr17 91406998 91407240 -3865411 + B4A SINE B4 15 274 -18 5 1282 716 101 31 0 chr17 91407293 91407422 -3865229 + (CA)n Simple_repeat Simple_repeat 2 134 0 5 1282 297 0 0 0 chr17 91407422 91407454 -3865197 + (GA)n Simple_repeat Simple_repeat 2 34 0 5 1282 944 251 9 5 chr17 91409089 91409301 -3863350 + URR1B DNA MER1_type 1 213 -12 5 1282 25 0 0 0 chr17 91409863 91409888 -3862763 + AT_rich Low_complexity Low_complexity 1 25 0 5 1282 256 94 38 0 chr17 91410143 91410196 -3862455 + (TA)n Simple_repeat Simple_repeat 2 56 0 5 1282 428 48 0 16 chr17 91410608 91410672 -3861979 + (TTTTTG)n Simple_repeat Simple_repeat 4 66 0 5 1282 1198 61 0 0 chr17 91410672 91410820 -3861831 - B1_Mus1 SINE Alu 0 148 1 5 1282 292 356 74 22 chr17 91412969 91413104 -3859547 - MER58A DNA MER1_type -16 208 67 5 1282 26 0 0 0 chr17 91413807 91413833 -3858818 + AT_rich Low_complexity Low_complexity 1 26 0 5 1282 1832 39 0 33 chr17 91413833 91414073 -3858578 - L1Md_F3 LINE L1 -16 6568 6337 5 1282 22 0 0 0 chr17 91414853 91414875 -3857776 + AT_rich Low_complexity Low_complexity 1 22 0 5 1282 26 30 0 0 chr17 91416548 91416581 -3856070 + AT_rich Low_complexity Low_complexity 1 33 0 5 1282 31 0 0 0 chr17 91416648 91416679 -3855972 + AT_rich Low_complexity Low_complexity 1 31 0 5 1282 901 133 29 22 chr17 91418008 91418292 -3854359 + (TCTA)n Simple_repeat Simple_repeat 1 286 0 5 1282 21 0 0 0 chr17 91418567 91418588 -3854063 + AT_rich Low_complexity Low_complexity 1 21 0 5 1282 257 284 54 0 chr17 91418640 91418714 -3853937 + MER20 DNA MER1_type 83 160 -59 5 1282 754 311 46 78 chr17 91418793 91419267 -3853384 + MER20B DNA MER1_type 275 733 -50 5 1282 7348 106 6 3 chr17 91419474 91420615 -3852036 + L1_Mus3 LINE L1 5489 6632 -6 5 1282 424 16 63 0 chr17 91422021 91422084 -3850567 + (CAGAGA)n Simple_repeat Simple_repeat 1 67 0 5 1282 21 36 0 0 chr17 91422383 91422411 -3850240 + AT_rich Low_complexity Low_complexity 1 28 0 5 1282 518 269 29 15 chr17 91423451 91423587 -3849064 + B1_Mur1 SINE Alu 1 138 -11 5 1282 819 111 10 5 chr17 91423587 91423798 -3848853 + (GA)n Simple_repeat Simple_repeat 1 212 0 5 1282 186 71 0 0 chr17 91424681 91424709 -3847942 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1282 297 216 0 0 chr17 91425068 91425156 -3847495 + (CA)n Simple_repeat Simple_repeat 1 88 0 5 1282 303 278 107 44 chr17 91425186 91425457 -3847194 - L1M4 LINE L1 -1896 4250 3963 5 1282 386 378 20 0 chr17 91425778 91425929 -3846722 + RSINE1 SINE B4 2 155 -10 5 1282 1284 215 6 76 chr17 91426412 91426769 -3845882 + MYSERV-int LTR ERVK 6219 6550 0 5 1282 666 123 88 0 chr17 91426770 91426884 -3845767 + RLTR11A2 LTR ERVK 1 124 -403 5 1282 890 176 47 26 chr17 91426933 91427126 -3845525 + RLTR11A2 LTR ERVK 249 445 -82 5 1282 400 224 57 24 chr17 91427554 91427677 -3844974 + Lx6 LINE L1 6262 6343 -707 5 1282 411 311 0 8 chr17 91427696 91427819 -3844832 + Lx6 LINE L1 6782 6903 -557 5 1282 680 260 102 9 chr17 91427812 91428037 -3844614 + Lx6 LINE L1 7183 7428 -32 5 1282 4779 98 52 10 chr17 91428194 91428902 -3843749 + Lx2 LINE L1 6258 6995 -2 5 1282 315 279 52 43 chr17 91429176 91429292 -3843359 - MER5A1 DNA MER1_type -21 145 29 5 1282 673 79 48 29 chr17 91429324 91429532 -3843119 + (TAGA)n Simple_repeat Simple_repeat 1 211 0 5 1282 247 250 18 0 chr17 91430059 91430115 -3842536 + GA-rich Low_complexity Low_complexity 1 57 0 5 1282 29 60 0 0 chr17 91433979 91434029 -3838622 + AT_rich Low_complexity Low_complexity 1 50 0 5 1282 328 222 136 0 chr17 91434531 91434612 -3838039 + B1_Mur2 SINE Alu 52 143 -6 5 1282 236 279 0 14 chr17 91434554 91434623 -3838028 + B4 SINE B4 164 231 -61 5 1282 25 65 0 0 chr17 91435993 91436039 -3836612 + AT_rich Low_complexity Low_complexity 1 46 0 5 1282 228 242 31 21 chr17 91436404 91436501 -3836150 - L1MA5 LINE L1 -1 6299 6202 5 1282 996 84 21 0 chr17 91437268 91437411 -3835240 + B1_Mus1 SINE Alu 2 147 -1 5 1282 207 0 0 0 chr17 91437680 91437703 -3834948 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1282 186 381 72 40 chr17 91437744 91437993 -3834658 + L2 LINE L2 1549 1805 -1614 5 1282 534 251 73 47 chr17 91439487 91439679 -3832972 - MTE2b LTR MaLR -4 375 179 5 1282 290 200 162 0 chr17 91439657 91439737 -3832914 - MTE2b LTR MaLR -119 260 168 5 1282 227 317 84 28 chr17 91440233 91440340 -3832311 + MTEb LTR MaLR 57 169 -210 5 1282 3640 142 22 38 chr17 91443114 91443482 -3829169 + L1_Mur2 LINE L1 685 1042 -6044 5 1282 1092 58 0 0 chr17 91443482 91443619 -3829032 + B1_Mus1 SINE Alu 2 138 -10 5 1282 342 0 0 0 chr17 91443627 91443665 -3828986 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 5 1282 6463 122 40 22 chr17 91443665 91444634 -3828017 + L1_Mur2 LINE L1 1044 2049 -3828 5 1282 186 103 0 0 chr17 91444634 91444663 -3827988 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1282 6463 119 44 19 chr17 91444663 91445012 -3827639 + L1_Mur2 LINE L1 2050 2392 -3485 5 1282 3021 158 32 24 chr17 91445007 91445592 -3827059 + L1_Mur2 LINE L1 3737 4326 -1551 5 1282 2473 166 20 15 chr17 91445593 91446047 -3826604 + Lx4A LINE L1 6597 7052 -6 5 1282 357 125 0 0 chr17 91446047 91446103 -3826548 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 1282 32 43 0 0 chr17 91446117 91446163 -3826488 + AT_rich Low_complexity Low_complexity 1 46 0 5 1282 360 0 0 0 chr17 91446726 91446766 -3825885 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1282 21 57 0 0 chr17 91447336 91447371 -3825280 + AT_rich Low_complexity Low_complexity 1 35 0 5 1282 4073 141 15 5 chr17 91447696 91448383 -3824268 - Lx7 LINE L1 -1760 5936 5249 5 1282 186 103 0 0 chr17 91449447 91449476 -3823175 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1282 378 0 0 0 chr17 91450467 91450509 -3822142 + (TC)n Simple_repeat Simple_repeat 2 43 0 5 1282 369 43 0 0 chr17 91450509 91450555 -3822096 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1282 204 97 0 0 chr17 91451192 91451223 -3821428 + (T)n Simple_repeat Simple_repeat 1 31 0 5 1282 1076 279 29 57 chr17 91451283 91451701 -3820950 - RLTR20B3 LTR ERVK -59 518 113 6 1282 196 250 77 26 chr17 91453371 91453449 -3819202 - MIR SINE MIR -25 237 156 6 1282 288 0 0 0 chr17 91454790 91454822 -3817829 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 6 1282 348 289 31 0 chr17 91455939 91456036 -3816615 - L1M5 LINE L1 -571 5608 5509 6 1282 1126 237 161 12 chr17 91456098 91456536 -3816115 + RMER5 LTR ERV1 22 524 -10 6 1282 342 0 0 0 chr17 91456553 91456591 -3816060 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1282 2197 93 8 77 chr17 91456689 91456973 -3815678 + ORR1A2 LTR MaLR 1 285 -42 6 1282 1170 68 0 0 chr17 91456973 91457120 -3815531 + B1_Mus2 SINE Alu 1 147 0 6 1282 2197 93 8 77 chr17 91457120 91457186 -3815465 + ORR1A2 LTR MaLR 286 327 0 6 1282 302 329 111 6 chr17 91457186 91457357 -3815294 - L1MC LINE L1 -778 5368 5180 6 1282 1705 88 4 8 chr17 91457572 91457814 -3814837 - L1Md_F2 LINE L1 -5 6577 6337 6 1282 314 354 10 0 chr17 91458095 91458189 -3814462 + B4 SINE B4 2 96 -196 6 1282 507 269 57 114 chr17 91458189 91458399 -3814252 + B3A SINE B2 1 198 0 6 1282 227 276 117 102 chr17 91458438 91458575 -3814076 + B1F SINE Alu 4 142 -7 6 1282 585 286 5 61 chr17 91458458 91458655 -3813996 + B4A SINE B4 107 292 0 6 1282 268 269 0 0 chr17 91458659 91458726 -3813925 + (CA)n Simple_repeat Simple_repeat 2 68 0 6 1282 360 176 0 0 chr17 91459853 91459921 -3812730 + (TATATG)n Simple_repeat Simple_repeat 2 69 0 6 1282 248 259 48 24 chr17 91459967 91460050 -3812601 - MIR SINE MIR -96 166 82 6 1282 675 262 62 62 chr17 91462133 91462341 -3810310 - B4 SINE B4 0 292 84 6 1282 1606 77 5 0 chr17 91462341 91462561 -3810090 - L1_Mus2 LINE L1 0 6566 6346 6 1282 675 262 62 62 chr17 91462561 91462576 -3810075 - B4 SINE B4 -209 83 69 6 1282 21 0 0 0 chr17 91463427 91463448 -3809203 + AT_rich Low_complexity Low_complexity 1 21 0 6 1282 8293 31 0 0 chr17 91463448 91464420 -3808231 + L1Md_T LINE L1 5610 6581 -1 6 1282 225 0 0 0 chr17 91464540 91464565 -3808086 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1282 342 315 54 9 chr17 91465412 91465524 -3807127 - MIR3 SINE MIR -25 183 67 6 1282 24 77 0 0 chr17 91468782 91468834 -3803817 + AT_rich Low_complexity Low_complexity 1 52 0 6 1282 492 235 134 0 chr17 91470086 91470235 -3802416 + URR1B DNA MER1_type 57 225 0 6 1282 333 257 140 49 chr17 91471146 91471289 -3801362 + HAL1-3A_ME LINE L1 2284 2439 -419 6 1282 312 279 25 0 chr17 91471289 91471368 -3801283 + G-rich Low_complexity Low_complexity 4 84 0 6 1282 420 20 0 0 chr17 91471958 91472007 -3800644 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 1282 339 25 0 0 chr17 91472008 91472048 -3800603 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1282 682 274 26 13 chr17 91472175 91472330 -3800321 - B3 SINE B2 -5 211 55 6 1282 1028 80 0 0 chr17 91472445 91472582 -3800069 + B1_Mus1 SINE Alu 2 138 -10 6 1282 24 67 0 0 chr17 91473973 91474018 -3798633 + AT_rich Low_complexity Low_complexity 1 45 0 6 1282 996 93 43 0 chr17 91475611 91475751 -3796900 - B1_Mus2 SINE Alu -1 146 1 6 1282 218 143 0 20 chr17 91477159 91477209 -3795442 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 6 1282 22 0 0 0 chr17 91477395 91477417 -3795234 + AT_rich Low_complexity Low_complexity 1 22 0 6 1282 283 212 49 24 chr17 91479523 91479605 -3793046 - L1ME3 LINE L1 -20 6142 6059 6 1282 241 239 75 21 chr17 91479619 91479713 -3792938 - L1ME3 LINE L1 -154 6008 5910 6 1282 456 19 0 0 chr17 91480187 91480240 -3792411 + (CA)n Simple_repeat Simple_repeat 1 53 0 6 1282 1368 62 0 0 chr17 91480562 91480741 -3791910 - L1Md_F2 LINE L1 -13 6569 6391 6 1282 1566 37 0 16 chr17 91481089 91481281 -3791370 - B2_Mm1a SINE B2 0 193 5 6 1282 21 36 0 0 chr17 91481336 91481364 -3791287 + AT_rich Low_complexity Low_complexity 1 28 0 6 1282 23 0 0 0 chr17 91481383 91481406 -3791245 + AT_rich Low_complexity Low_complexity 1 23 0 6 1282 31 58 0 0 chr17 91481435 91481487 -3791164 + AT_rich Low_complexity Low_complexity 1 52 0 6 1282 321 26 0 0 chr17 91484158 91484196 -3788455 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1282 697 96 8 17 chr17 91484198 91484315 -3788336 + (GGGAGA)n Simple_repeat Simple_repeat 3 118 0 6 1282 321 89 0 0 chr17 91486329 91486374 -3786277 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 6 1283 360 164 0 0 chr17 91489081 91489148 -3783503 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 1283 27 62 0 0 chr17 91489904 91489952 -3782699 + AT_rich Low_complexity Low_complexity 1 48 0 6 1283 387 0 0 0 chr17 91490004 91490047 -3782604 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 1283 207 96 58 0 chr17 91490305 91490357 -3782294 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1283 232 196 18 0 chr17 91490668 91490724 -3781927 + CT-rich Low_complexity Low_complexity 2 58 0 6 1283 534 43 0 0 chr17 91490727 91490796 -3781855 + (TG)n Simple_repeat Simple_repeat 2 70 0 6 1283 378 0 0 0 chr17 91490970 91491012 -3781639 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1283 315 0 0 0 chr17 91491342 91491377 -3781274 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 1283 180 231 0 0 chr17 91492101 91492153 -3780498 + GA-rich Low_complexity Low_complexity 2 53 0 6 1283 603 0 0 0 chr17 91492435 91492502 -3780149 + (GA)n Simple_repeat Simple_repeat 1 67 0 6 1283 241 367 122 2 chr17 91493557 91493745 -3778906 + MIR SINE MIR 3 206 -56 6 1283 217 329 27 14 chr17 91494321 91494395 -3778256 - ID4 SINE ID -2 81 7 6 1283 377 283 19 9 chr17 91494396 91494503 -3778148 - PB1 SINE Alu -2 125 18 6 1283 366 243 168 37 chr17 91494763 91494870 -3777781 + B1_Mur2 SINE Alu 19 139 -10 6 1283 243 88 0 0 chr17 91494870 91494904 -3777747 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 6 1283 264 279 14 68 chr17 91495058 91495131 -3777520 + ID2 SINE ID 10 78 -5 6 1283 225 211 0 0 chr17 91495295 91495352 -3777299 + (TA)n Simple_repeat Simple_repeat 1 57 0 6 1283 206 266 4 18 chr17 91495405 91495477 -3777174 + MIRc SINE MIR 116 190 -78 6 1283 258 333 121 43 chr17 91495504 91495645 -3777006 - MIR SINE MIR -34 228 77 6 1283 459 52 0 0 chr17 91495665 91495723 -3776928 + (TAAAA)n Simple_repeat Simple_repeat 4 61 0 6 1283 1496 241 72 8 chr17 91495933 91496322 -3776329 + MTD LTR MaLR 6 419 0 6 1283 249 33 0 0 chr17 91496587 91496617 -3776034 + (ATTG)n Simple_repeat Simple_repeat 3 32 0 6 1283 5528 138 89 6 chr17 91497132 91498282 -3774369 + Lx3C LINE L1 5705 6979 -2 6 1283 27 0 0 0 chr17 91498283 91498310 -3774341 + AT_rich Low_complexity Low_complexity 1 27 0 6 1283 404 129 0 34 chr17 91498509 91498597 -3774054 - Lx2A LINE L1 0 7008 6924 6 1283 7748 152 41 11 chr17 91498597 91500000 -3772651 - Lx2A LINE L1 -40 6968 5524 6 1283 455 101 7 0 chr17 91500000 91500076 -3772575 - L1_Mm LINE L1 -360 5526 5445 1 1283 10999 153 25 34 chr17 91500071 91502011 -3770640 + L1_Mur2 LINE L1 3341 5287 -590 2 1283 1167 49 0 20 chr17 91502011 91502158 -3770493 + B1_Mus1 SINE Alu 5 148 0 3 1283 10999 153 25 34 chr17 91502158 91502328 -3770323 + L1_Mur2 LINE L1 5288 5432 -445 2 1283 3104 58 10 0 chr17 91502434 91502827 -3769824 + L1_Mus1 LINE L1 6171 6567 0 4 1283 459 0 0 0 chr17 91503264 91503315 -3769336 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 1283 243 0 0 0 chr17 91503315 91503341 -3769310 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 1283 553 356 101 75 chr17 91503709 91504067 -3768584 + MER70B LTR ERVL 1 367 -211 7 1283 1313 70 0 5 chr17 91504255 91504443 -3768208 + L1Md_F2 LINE L1 6394 6580 -2 8 1283 399 276 135 26 chr17 91504649 91505008 -3767643 - L1M5 LINE L1 -732 5442 5037 9 1283 631 240 34 45 chr17 91505122 91505301 -3767350 + B3 SINE B2 10 186 -30 1 1283 258 32 0 0 chr17 91507532 91507563 -3765088 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 1 1283 1106 82 0 0 chr17 91507564 91507710 -3764941 - B1_Mus2 SINE Alu 0 147 2 1 1283 21 0 0 0 chr17 91508794 91508815 -3763836 + AT_rich Low_complexity Low_complexity 1 21 0 1 1283 22 0 0 0 chr17 91509339 91509361 -3763290 + AT_rich Low_complexity Low_complexity 1 22 0 1 1283 1633 218 49 17 chr17 91510365 91510715 -3761936 - ORR1C2 LTR MaLR 0 384 24 1 1283 449 171 18 0 chr17 91510817 91510928 -3761723 + C-rich Low_complexity Low_complexity 3 115 0 1 1283 1021 247 15 51 chr17 91510957 91511290 -3761361 - Lx4B LINE L1 -21 7037 6717 1 1283 242 216 20 0 chr17 91511290 91511341 -3761310 - ORR1C2 LTR MaLR -315 52 1 1 1283 210 200 0 20 chr17 91511451 91511502 -3761149 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 1 1283 300 53 0 0 chr17 91511790 91511828 -3760823 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1283 2253 258 30 11 chr17 91512089 91512631 -3760020 - Lx6 LINE L1 -11 7449 6898 2 1283 570 268 64 0 chr17 91512641 91512798 -3759853 - Lx6 LINE L1 -702 6758 6592 2 1283 393 235 0 0 chr17 91512825 91512910 -3759741 - Lx6 LINE L1 -983 6477 6393 2 1283 609 267 49 38 chr17 91514115 91514298 -3758353 - MTE2b LTR MaLR 0 379 195 2 1283 1223 305 154 20 chr17 91514398 91515040 -3757611 - ORR1C2-int LTR MaLR -2 1578 709 1 1283 299 348 14 55 chr17 91515085 91515231 -3757420 - ORR1C2-int LTR MaLR -956 624 485 1 1283 500 314 132 53 chr17 91515216 91515519 -3757132 - ORR1C2-int LTR MaLR -1206 374 48 1 1283 33 25 0 0 chr17 91515899 91515939 -3756712 + AT_rich Low_complexity Low_complexity 1 40 0 2 1283 1690 180 10 0 chr17 91516304 91516598 -3756053 + Lx4A LINE L1 6760 7056 -2 2 1283 933 128 0 0 chr17 91517070 91517306 -3755345 + (TC)n Simple_repeat Simple_repeat 1 236 0 2 1283 588 257 7 35 chr17 91517309 91517454 -3755197 - B1_Mur4 SINE Alu -3 147 7 2 1283 2295 156 8 2 chr17 91518431 91518824 -3753827 - Lx2A1 LINE L1 -12 6996 6602 2 1283 300 340 18 9 chr17 91519096 91519206 -3753445 + PB1 SINE Alu 15 125 -2 2 1283 3750 35 2 2 chr17 91519392 91519845 -3752806 - L1Md_F3 LINE L1 -20 6564 6112 2 1283 3581 171 75 13 chr17 91520391 91520677 -3751974 - L1_Mur1 LINE L1 -1925 3961 3649 2 1283 257 0 0 29 chr17 91520677 91520711 -3751940 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 3 1283 3581 171 75 13 chr17 91520711 91521273 -3751378 - L1_Mur1 LINE L1 -2238 3648 3061 2 1283 7507 70 9 3 chr17 91521268 91522317 -3750334 - L1Md_F2 LINE L1 -11 6571 5516 3 1283 4986 132 6 4 chr17 91522319 91523127 -3749524 - MusHAL1 LINE L1 -844 1868 1059 3 1283 21 0 0 0 chr17 91523338 91523359 -3749292 + AT_rich Low_complexity Low_complexity 1 21 0 3 1283 273 379 121 0 chr17 91523502 91523618 -3749033 - RSINE1 SINE B4 -25 140 11 3 1283 228 318 22 11 chr17 91524092 91524181 -3748470 - L1MC LINE L1 -2256 5626 5537 3 1283 256 385 6 0 chr17 91525022 91525196 -3747455 + (TGG)n Simple_repeat Simple_repeat 1 175 0 3 1283 240 264 61 43 chr17 91526039 91526154 -3746497 + L1MA6 LINE L1 6183 6299 -1 3 1283 33 25 0 0 chr17 91526158 91526198 -3746453 + AT_rich Low_complexity Low_complexity 1 40 0 3 1283 23 33 0 0 chr17 91526341 91526371 -3746280 + AT_rich Low_complexity Low_complexity 1 30 0 3 1283 317 82 20 0 chr17 91526469 91526518 -3746133 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 1283 865 335 98 19 chr17 91527228 91527657 -3744994 - Lx8 LINE L1 -378 7095 6633 4 1283 455 278 107 11 chr17 91527680 91527858 -3744793 - Lx8 LINE L1 -920 6553 6359 4 1283 392 298 44 0 chr17 91527936 91528050 -3744601 + MTEa LTR MaLR 261 379 0 4 1283 426 285 88 35 chr17 91528054 91528425 -3744226 + L1MB5 LINE L1 5789 6184 0 4 1283 2389 148 23 0 chr17 91528499 91528891 -3743760 - Lx LINE L1 -443 6211 5811 4 1283 13427 174 67 7 chr17 91528876 91531592 -3741059 - Lx LINE L1 -349 5537 2659 4 1283 219 229 0 32 chr17 91531680 91531743 -3740908 + (TATATG)n Simple_repeat Simple_repeat 2 62 0 4 1283 393 22 0 0 chr17 91531744 91531790 -3740861 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1283 508 317 52 37 chr17 91531794 91532063 -3740588 - B4 SINE B4 -16 276 4 4 1283 22 0 0 0 chr17 91532065 91532087 -3740564 + AT_rich Low_complexity Low_complexity 1 22 0 4 1283 21 36 0 0 chr17 91532411 91532439 -3740212 + AT_rich Low_complexity Low_complexity 1 28 0 4 1283 705 298 32 132 chr17 91533481 91533791 -3738860 + MTEb LTR MaLR 56 334 -45 5 1283 31 0 0 0 chr17 91534024 91534055 -3738596 + AT_rich Low_complexity Low_complexity 1 31 0 5 1283 28 29 0 0 chr17 91534259 91534294 -3738357 + AT_rich Low_complexity Low_complexity 1 35 0 5 1283 591 289 13 13 chr17 91536582 91536608 -3736043 - RSINE1 SINE B4 -12 153 126 5 1283 441 0 0 0 chr17 91536608 91536657 -3735994 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1283 591 289 13 13 chr17 91536657 91536781 -3735870 - RSINE1 SINE B4 -40 125 4 5 1283 236 333 0 0 chr17 91536858 91536924 -3735727 - B3A SINE B2 -132 66 1 5 1283 360 344 56 6 chr17 91537785 91537946 -3734705 - LTR16B2 LTR ERVL -288 174 6 5 1283 329 249 69 26 chr17 91537946 91538116 -3734535 - L1M5 LINE L1 -573 5551 5377 5 1283 216 315 42 32 chr17 91538296 91538391 -3734260 - PB1D10 SINE Alu -3 114 19 5 1283 326 306 53 43 chr17 91538442 91538630 -3734021 - L1M5 LINE L1 -1016 5130 4941 5 1283 351 44 0 0 chr17 91538630 91538675 -3733976 + (TA)n Simple_repeat Simple_repeat 1 45 0 5 1283 322 326 68 18 chr17 91538718 91538940 -3733711 - MIR SINE MIR -10 252 20 6 1283 459 0 0 0 chr17 91538949 91539000 -3733651 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1283 1258 310 49 36 chr17 91539073 91539521 -3733130 + MT2A LTR ERVL 6 459 -74 6 1283 583 286 101 50 chr17 91540556 91540854 -3731797 + Charlie19a DNA Charlie 1 313 -73 6 1283 1158 122 0 0 chr17 91541277 91541457 -3731194 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 1283 1377 301 72 43 chr17 91542412 91543132 -3729519 + RMER1B Other Other 15 509 -557 6 1283 248 0 0 30 chr17 91543200 91543233 -3729418 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 6 1283 21 0 0 0 chr17 91544581 91544602 -3728049 + AT_rich Low_complexity Low_complexity 1 21 0 6 1283 636 262 102 25 chr17 91544780 91544976 -3727675 + MTD LTR MaLR 198 408 -11 6 1283 452 261 43 61 chr17 91546233 91546274 -3726377 - ORR1C2 LTR MaLR -177 190 148 6 1283 801 31 0 0 chr17 91546274 91546370 -3726281 + (GA)n Simple_repeat Simple_repeat 2 97 0 7 1283 543 222 32 167 chr17 91546370 91546570 -3726081 - ORR1C2 LTR MaLR -211 173 1 6 1283 3828 223 113 21 chr17 91546570 91547761 -3724890 - ORR1C2-int LTR MaLR 0 1370 33 6 1283 961 226 241 6 chr17 91547782 91548093 -3724558 - ORR1C2 LTR MaLR 0 384 1 6 1283 495 234 64 19 chr17 91548480 91548637 -3724014 - Lx9 LINE L1 -611 7033 6870 7 1283 566 345 27 24 chr17 91548700 91549036 -3723615 + Lx9 LINE L1 7060 7396 -248 7 1283 843 53 0 0 chr17 91549051 91549164 -3723487 + (TC)n Simple_repeat Simple_repeat 1 113 0 7 1283 24 32 0 0 chr17 91549430 91549461 -3723190 + AT_rich Low_complexity Low_complexity 1 31 0 7 1283 22 70 0 0 chr17 91550961 91551004 -3721647 + AT_rich Low_complexity Low_complexity 1 43 0 7 1283 31 26 0 0 chr17 91551121 91551159 -3721492 + AT_rich Low_complexity Low_complexity 1 38 0 7 1283 1207 231 53 99 chr17 91551696 91552445 -3720206 + RMER19B LTR ERVK 1 902 0 7 1283 279 0 0 0 chr17 91553169 91553200 -3719451 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 1283 698 126 7 0 chr17 91553200 91553335 -3719316 + (GA)n Simple_repeat Simple_repeat 2 137 0 7 1283 24 53 0 0 chr17 91553927 91553965 -3718686 + AT_rich Low_complexity Low_complexity 1 38 0 8 1283 432 0 0 0 chr17 91554751 91554799 -3717852 + (TG)n Simple_repeat Simple_repeat 1 48 0 8 1283 4173 36 2 2 chr17 91555992 91556494 -3716157 - L1Md_F3 LINE L1 0 6584 6083 8 1283 1570 40 0 25 chr17 91556494 91556698 -3715953 + L1_Mm LINE L1 4871 5069 -814 8 1283 1728 231 15 20 chr17 91557487 91558271 -3714380 + L1_Mur1 LINE L1 869 1648 -4238 8 1283 276 30 0 0 chr17 91558294 91558327 -3714324 + (GA)n Simple_repeat Simple_repeat 2 34 0 8 1283 243 0 0 0 chr17 91558338 91558365 -3714286 + (CAGA)n Simple_repeat Simple_repeat 4 30 0 8 1283 2674 220 57 15 chr17 91558630 91559231 -3713420 - Lx5 LINE L1 0 7050 6425 8 1283 1740 218 57 5 chr17 91559331 91559736 -3712915 - Lx9 LINE L1 -439 7205 6780 8 1283 315 238 78 16 chr17 91559738 91559866 -3712785 + Lx9 LINE L1 7503 7638 -6 8 1283 365 338 15 15 chr17 91562350 91562485 -3710166 - MIR SINE MIR -19 243 109 9 1283 1865 138 97 0 chr17 91562494 91562792 -3709859 - ORR1A2 LTR MaLR 0 327 1 9 1283 10463 150 45 12 chr17 91562792 91563717 -3708934 - ORR1A2-int LTR MaLR 0 1963 1039 9 1283 312 27 0 0 chr17 91563717 91563754 -3708897 + (TC)n Simple_repeat Simple_repeat 1 37 0 9 1283 5109 105 13 4 chr17 91563759 91564516 -3708135 - L1_Mus3 LINE L1 -3 6635 5872 9 1283 1646 160 39 7 chr17 91564524 91564833 -3707818 - Lx2 LINE L1 -2 6995 6677 9 1283 10463 150 45 12 chr17 91564833 91565791 -3706860 - ORR1A2-int LTR MaLR -928 1035 1 9 1283 1993 154 6 3 chr17 91565791 91566117 -3706534 - ORR1A2 LTR MaLR 0 327 1 9 1283 251 276 92 118 chr17 91566735 91566887 -3705764 + LTR33A LTR ERVL 5 152 -368 9 1283 940 87 0 0 chr17 91567916 91568043 -3704608 - L1_Mus3 LINE L1 -304 6334 6208 9 1283 2118 81 7 33 chr17 91568057 91568362 -3704289 + L1_Mus3 LINE L1 6342 6638 0 9 1283 321 246 30 67 chr17 91568398 91568501 -3704150 - L1MD3 LINE L1 -953 7042 6936 9 1283 240 35 0 0 chr17 91568501 91568530 -3704121 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 9 1283 321 246 30 67 chr17 91568530 91568561 -3704090 - L1MD3 LINE L1 -1060 6935 6913 9 1283 7147 131 14 3 chr17 91568905 91570288 -3702363 + Lx LINE L1 5247 6648 -6 9 1283 1213 94 44 16 chr17 91570613 91570796 -3701855 - B2_Mm2 SINE B2 -6 189 2 1 1283 1023 229 4 26 chr17 91574346 91574575 -3698076 + URR1A DNA MER1_type 2 225 -1 1 1283 41 78 0 0 chr17 91574842 91574932 -3697719 + AT_rich Low_complexity Low_complexity 1 90 0 1 1283 683 277 122 42 chr17 91575276 91575653 -3696998 + RMER10A LTR ERVL 11 417 -25 1 1283 1883 180 167 68 chr17 91577101 91577543 -3695108 - RMER19C LTR ERVK -125 486 1 1 1283 23 54 0 0 chr17 91577837 91577874 -3694777 + AT_rich Low_complexity Low_complexity 1 37 0 1 1283 799 153 0 15 chr17 91579306 91579439 -3693212 - RMER19C LTR ERVK 0 611 481 1 1283 615 48 0 0 chr17 91579443 91579526 -3693125 + (TG)n Simple_repeat Simple_repeat 1 83 0 1 1283 477 321 37 7 chr17 91579530 91579665 -3692986 - RSINE1 SINE B4 -26 139 1 1 1283 228 130 0 0 chr17 91580185 91580231 -3692420 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1283 1684 185 62 0 chr17 91580330 91580638 -3692013 + ORR1A2 LTR MaLR 1 327 0 1 1283 1315 196 135 33 chr17 91581297 91581630 -3691021 - ORR1B2 LTR MaLR 0 367 1 1 1283 5566 219 73 16 chr17 91581634 91583057 -3689594 - ORR1B2-int LTR MaLR -4 1505 2 1 1283 1648 217 49 23 chr17 91583062 91583407 -3689244 - ORR1B2 LTR MaLR -8 359 6 1 1283 183 237 117 17 chr17 91585300 91585360 -3687291 - L2 LINE L2 -485 2934 2869 1 1283 357 359 51 79 chr17 91586093 91586308 -3686343 - B4A SINE B4 -75 217 9 1 1283 1594 26 11 0 chr17 91586749 91586938 -3685713 - B2_Mm1t SINE B2 -1 192 2 1 1283 222 37 0 0 chr17 91586991 91587018 -3685633 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1283 405 0 0 0 chr17 91587413 91587458 -3685193 + (TTA)n Simple_repeat Simple_repeat 2 46 0 1 1283 3453 92 27 18 chr17 91588326 91588837 -3683814 - L1Md_F2 LINE L1 0 6582 6067 1 1283 333 0 0 0 chr17 91588975 91589012 -3683639 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1283 5267 59 4 17 chr17 91589786 91590480 -3682171 + L1Md_F2 LINE L1 5897 6581 -1 1 1283 23 33 0 0 chr17 91590822 91590852 -3681799 + AT_rich Low_complexity Low_complexity 1 30 0 1 1283 239 378 11 80 chr17 91590944 91591131 -3681520 + RLTR25B LTR ERVK 850 1023 -5 1 1283 1272 82 0 0 chr17 91591478 91591713 -3680938 + (TG)n Simple_repeat Simple_repeat 1 235 0 1 1283 1113 80 11 11 chr17 91592003 91592179 -3680472 + (TTTTC)n Simple_repeat Simple_repeat 1 176 0 1 1283 1082 60 0 0 chr17 91592180 91592314 -3680337 - B1_Mus1 SINE Alu -13 135 2 1 1283 4113 77 0 11 chr17 91592610 91593174 -3679477 - L1Md_F2 LINE L1 0 6582 6025 1 1283 2665 34 12 0 chr17 91593174 91593497 -3679154 + L1Md_F2 LINE L1 5706 6032 -550 1 1283 407 19 19 0 chr17 91593838 91593890 -3678761 + (GA)n Simple_repeat Simple_repeat 1 53 0 1 1283 292 340 49 67 chr17 91593907 91594251 -3678400 - L1MA4 LINE L1 -366 5934 5597 1 1283 576 42 0 0 chr17 91594599 91594670 -3677981 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 1283 225 296 31 0 chr17 91595022 91595120 -3677531 + L1M2 LINE L1 5645 5745 -552 1 1283 800 274 65 32 chr17 91597175 91597550 -3675101 - L1MA4A LINE L1 -103 6053 5677 1 1283 8493 25 1 0 chr17 91597555 91599057 -3673594 - L1Md_T LINE L1 0 6582 5095 1 1283 278 308 81 14 chr17 91599041 91599189 -3673462 - L1MA4A LINE L1 -639 5661 5504 1 1283 305 279 125 0 chr17 91599205 91599309 -3673342 - L1M4 LINE L1 -765 5381 5265 1 1283 225 0 0 0 chr17 91600801 91600826 -3671825 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1283 268 250 23 45 chr17 91602211 91602299 -3670352 - MTEa LTR MaLR 0 379 294 1 1283 1267 184 50 56 chr17 91602968 91603291 -3669360 - RLTR9E LTR ERVK 0 409 89 1 1283 2670 169 60 37 chr17 91603292 91603838 -3668813 + Lx4A LINE L1 6497 7055 -3 1 1283 377 322 121 63 chr17 91603964 91604351 -3668300 + L1MC LINE L1 2546 2945 -3201 1 1283 326 97 0 0 chr17 91604351 91604413 -3668238 + L1Md_F3 LINE L1 6521 6582 -2 1 1283 377 322 121 63 chr17 91604413 91604718 -3667933 + L1MC LINE L1 2946 3278 -2868 1 1283 1521 239 159 10 chr17 91604769 91605241 -3667410 + RMER1B Other Other 407 1043 -23 1 1283 532 286 15 31 chr17 91605253 91605383 -3667268 + B3A SINE B2 27 154 -44 1 1283 252 152 83 8 chr17 91605467 91605600 -3667051 + (TA)n Simple_repeat Simple_repeat 2 144 0 1 1283 297 342 25 38 chr17 91606289 91606447 -3666204 + ORR1D2 LTR MaLR 213 368 -2 1 1283 240 324 58 61 chr17 91606955 91607066 -3665585 + L1M3 LINE L1 5074 5178 -968 1 1283 2684 118 12 2 chr17 91607066 91607481 -3665170 + L1_Mus3 LINE L1 6214 6632 -6 1 1283 310 272 83 71 chr17 91607481 91607707 -3664944 + L1M3 LINE L1 5179 5410 -752 1 1283 308 319 75 61 chr17 91607742 91607889 -3664762 + B1F SINE Alu 1 149 0 1 1283 306 254 31 50 chr17 91607910 91608065 -3664586 + L1MA6 LINE L1 6102 6251 -49 1 1283 369 192 13 0 chr17 91608069 91608147 -3664504 + ORR1B2 LTR MaLR 3 81 -286 1 1283 182 306 65 0 chr17 91608191 91608253 -3664398 - MIRm SINE MIR -3 273 208 1 1283 1883 161 28 17 chr17 91608926 91609280 -3663371 + RLTR15 LTR ERVK 1 358 -1 1 1283 24 0 0 0 chr17 91609526 91609550 -3663101 + AT_rich Low_complexity Low_complexity 1 24 0 1 1283 238 215 0 58 chr17 91610005 91610074 -3662577 - L1MB3 LINE L1 -52 6131 6067 1 1283 497 309 11 37 chr17 91610099 91610351 -3662300 - B4A SINE B4 -2 290 1 1 1283 259 289 101 38 chr17 91610351 91610509 -3662142 - L1MB1 LINE L1 -105 6063 5896 1 1283 1475 181 103 12 chr17 91611149 91611478 -3661173 - RLTR15 LTR ERVK 0 359 1 1 1283 446 354 110 0 chr17 91611480 91611717 -3660934 + Tigger5 DNA MER2_type 2 264 -2142 1 1283 394 274 47 0 chr17 91611701 91611807 -3660844 + Tigger5 DNA MER2_type 2292 2402 -4 1 1283 253 174 490 0 chr17 91612330 91612428 -3660223 + B3 SINE B2 54 199 -17 1 1283 272 27 0 26 chr17 91612430 91612468 -3660183 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1 1283 2775 162 168 47 chr17 91612739 91613547 -3659104 + RMER17A2 LTR ERVK 1 906 0 1 1283 940 128 0 0 chr17 91613817 91613950 -3658701 + B1_Mus1 SINE Alu 3 135 -13 1 1283 300 120 0 0 chr17 91613950 91614000 -3658651 + (T)n Simple_repeat Simple_repeat 1 50 0 1 1283 8238 25 3 0 chr17 91614012 91615632 -3657019 - L1Md_T LINE L1 -2 6580 4954 1 1283 603 124 11 0 chr17 91615637 91615726 -3656925 + B1_Mus2 SINE Alu 58 147 0 1 1283 309 26 0 0 chr17 91615726 91615764 -3656887 + (A)n Simple_repeat Simple_repeat 1 38 0 1 1283 579 340 27 24 chr17 91615831 91616123 -3656528 + L1VL4 LINE L1 279 571 -5731 1 1283 15420 149 16 2 chr17 91616117 91618757 -3653894 + L1_Mm LINE L1 3031 5705 -178 1 1283 25 0 0 0 chr17 91618759 91618784 -3653867 + AT_rich Low_complexity Low_complexity 1 25 0 1 1283 27 62 0 0 chr17 91619010 91619058 -3653593 + AT_rich Low_complexity Low_complexity 1 48 0 1 1283 332 283 48 34 chr17 91619058 91619251 -3653400 - MTE2b LTR MaLR 0 374 170 1 1284 265 188 0 20 chr17 91619947 91619996 -3652655 - ID4_ SINE ID -19 64 17 1 1284 25 31 0 0 chr17 91620426 91620458 -3652193 + AT_rich Low_complexity Low_complexity 1 32 0 1 1284 24 0 0 0 chr17 91620753 91620777 -3651874 + AT_rich Low_complexity Low_complexity 1 24 0 1 1284 3715 65 0 0 chr17 91622154 91622631 -3650020 - L1Md_F2 LINE L1 -1 6581 6105 1 1284 21 36 0 0 chr17 91622664 91622692 -3649959 + AT_rich Low_complexity Low_complexity 1 28 0 1 1284 22 35 0 0 chr17 91623137 91623166 -3649485 + AT_rich Low_complexity Low_complexity 1 29 0 1 1284 845 151 86 19 chr17 91623233 91623250 -3649401 - B2_Mm2 SINE B2 -22 173 158 1 1284 3588 72 4 6 chr17 91623250 91623737 -3648914 - L1Md_F2 LINE L1 -6 6576 6091 1 1284 1061 56 97 0 chr17 91623737 91623881 -3648770 - B2_Mm1a SINE B2 -35 158 1 1 1284 316 348 65 65 chr17 91623924 91624398 -3648253 + L2a LINE L2 2306 2779 -640 1 1284 506 339 125 33 chr17 91624430 91624766 -3647885 + L2a LINE L2 3060 3426 0 1 1284 1327 127 23 43 chr17 91625841 91626097 -3646554 + Lx LINE L1 6402 6652 -2 1 1284 33 0 0 0 chr17 91626492 91626525 -3646126 + AT_rich Low_complexity Low_complexity 1 33 0 1 1284 22 0 0 0 chr17 91627101 91627123 -3645528 + AT_rich Low_complexity Low_complexity 1 22 0 1 1284 1410 138 25 0 chr17 91627124 91627364 -3645287 - Lx LINE L1 -2 6652 6407 1 1284 2631 88 24 3 chr17 91627364 91627790 -3644861 - Lx LINE L1 -712 5942 5498 1 1284 573 332 29 0 chr17 91628060 91628268 -3644383 - B3 SINE B2 0 216 3 1 1284 1161 42 21 0 chr17 91628989 91629131 -3643520 + B1_Mm SINE Alu 2 146 -1 1 1284 431 100 22 44 chr17 91629144 91629280 -3643371 + A-rich Low_complexity Low_complexity 3 135 0 1 1284 585 269 102 22 chr17 91629390 91629740 -3642911 - L1_Rod LINE L1 -1051 4829 4424 1 1284 6928 134 22 18 chr17 91629750 91631386 -3641265 - Lx LINE L1 -7 6647 5009 1 1284 261 185 0 0 chr17 91631422 91631487 -3641164 + (CA)n Simple_repeat Simple_repeat 1 65 0 1 1284 600 303 27 67 chr17 91631525 91631748 -3640903 - B3A SINE B2 -1 215 2 1 1284 855 20 0 0 chr17 91632029 91632130 -3640521 + (CA)n Simple_repeat Simple_repeat 2 102 0 1 1284 1378 229 65 17 chr17 91632300 91632655 -3639996 - ORR1D1 LTR MaLR -2 372 1 1 1284 586 289 41 18 chr17 91633140 91633297 -3639354 + B3 SINE B2 1 161 -55 1 1284 519 359 94 62 chr17 91633297 91633784 -3638867 + MLT1D LTR MaLR 3 505 0 1 1284 21 0 0 0 chr17 91633821 91633842 -3638809 + AT_rich Low_complexity Low_complexity 1 21 0 1 1284 6694 186 69 27 chr17 91633842 91635230 -3637421 - Lx5 LINE L1 -3 7047 5601 1 1284 24 32 0 0 chr17 91635268 91635299 -3637352 + AT_rich Low_complexity Low_complexity 1 31 0 1 1284 255 171 200 0 chr17 91635465 91635535 -3637116 - MLT1B LTR MaLR -265 125 42 1 1284 258 169 0 0 chr17 91635603 91635668 -3636983 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 1284 1010 224 80 95 chr17 91635691 91636113 -3636538 - MT2A LTR ERVL -48 553 2 1 1284 204 40 0 0 chr17 91637456 91637481 -3635170 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1284 7142 173 62 34 chr17 91637491 91638919 -3633732 - MERVL_2A-int LTR ERVL -3335 2426 959 2 1284 22 35 0 0 chr17 91638919 91638948 -3633703 + AT_rich Low_complexity Low_complexity 1 29 0 2 1284 985 211 78 0 chr17 91639049 91639253 -3633398 - MERVL_2A-int LTR ERVL -4783 978 759 2 1284 2194 225 0 7 chr17 91639727 91640183 -3632468 - MERVL_2A-int LTR ERVL -5306 455 3 2 1284 300 119 0 0 chr17 91640185 91640252 -3632399 - MT2A LTR ERVL 0 533 467 2 1284 288 224 0 0 chr17 91640252 91640319 -3632332 + (TATATG)n Simple_repeat Simple_repeat 6 72 0 2 1284 336 237 0 0 chr17 91640333 91640409 -3632242 - MT2A LTR ERVL -41 560 485 2 1284 3044 112 2 8 chr17 91640432 91640909 -3631742 + MusHAL1 LINE L1 1958 2431 -281 2 1284 2409 164 5 7 chr17 91640945 91641375 -3631276 + L1_Mur2 LINE L1 4659 5087 -790 2 1284 1189 74 0 0 chr17 91641379 91641542 -3631109 + L1_Mus1 LINE L1 6405 6567 0 2 1284 1644 188 117 30 chr17 91641562 91641930 -3630721 + Lx LINE L1 6250 6649 -5 2 1284 392 269 52 9 chr17 91641930 91642046 -3630605 - MT2A LTR ERVL -412 121 1 2 1284 218 222 61 12 chr17 91642245 91642327 -3630324 + (TAGA)n Simple_repeat Simple_repeat 1 86 0 2 1284 200 73 73 0 chr17 91645102 91645143 -3627508 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2 1284 192 77 0 0 chr17 91646203 91646229 -3626422 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 1284 17367 179 48 37 chr17 91647936 91652985 -3619666 - Lx2B LINE L1 -207 6793 1685 2 1284 227 140 52 17 chr17 91653121 91653179 -3619472 + T-rich Low_complexity Low_complexity 1 60 0 2 1284 378 0 0 0 chr17 91653334 91653376 -3619275 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1284 1079 240 34 89 chr17 91653887 91654267 -3618384 + RLTR9A LTR ERVK 1 359 -9 2 1284 419 349 56 60 chr17 91655212 91655287 -3617364 + B4A SINE B4 35 110 -182 2 1284 297 0 0 0 chr17 91655287 91655320 -3617331 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2 1284 419 349 56 60 chr17 91655320 91655494 -3617157 + B4A SINE B4 111 283 -9 2 1284 243 0 0 0 chr17 91655629 91655656 -3616995 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1284 201 222 0 0 chr17 91655680 91655716 -3616935 + polypurine Low_complexity Low_complexity 3 38 0 2 1284 276 78 15 45 chr17 91656073 91656140 -3616511 + (CAAA)n Simple_repeat Simple_repeat 4 68 0 2 1284 12099 142 18 6 chr17 91656251 91659168 -3613483 - L1_Mus4 LINE L1 -5 6631 3675 2 1284 422 189 36 0 chr17 91659160 91659259 -3613392 + L1_Mm LINE L1 2732 2835 -3048 2 1284 2559 193 99 9 chr17 91659266 91659929 -3612722 - MYSERV16_I-int LTR ERVK -307 2019 1297 2 1284 637 188 45 51 chr17 91659919 91660076 -3612575 - RMER3D-int LTR ERVK -1146 1696 1541 2 1284 1901 177 131 17 chr17 91660116 91660583 -3612068 - RMER3D-int LTR ERVK -1309 1533 1014 2 1284 225 228 34 34 chr17 91660627 91660686 -3611965 + polypyrimidine Low_complexity Low_complexity 4 62 0 2 1284 624 117 0 86 chr17 91660686 91660883 -3611768 + CT-rich Low_complexity Low_complexity 1 180 0 2 1284 197 143 0 45 chr17 91660954 91660998 -3611653 + C-rich Low_complexity Low_complexity 4 45 0 2 1284 550 119 4 0 chr17 91661019 91661132 -3611519 - RMER3D-int LTR ERVK -2278 564 487 2 1284 6320 139 14 11 chr17 91661162 91662870 -3609781 - L1VL4 LINE L1 -1454 2460 714 2 1284 329 369 8 0 chr17 91664392 91664514 -3608137 - LFSINE_Vert SINE SINE -270 189 67 2 1284 776 200 29 0 chr17 91665482 91665622 -3607029 + B1_Mus1 SINE Alu 2 145 -3 2 1284 1453 226 65 18 chr17 91665864 91666202 -3606449 - MTC LTR MaLR -5 416 63 2 1284 302 347 123 111 chr17 91666236 91666398 -3606253 + RSINE1 SINE B4 2 165 0 2 1284 357 186 0 0 chr17 91666398 91666468 -3606183 + (TA)n Simple_repeat Simple_repeat 1 70 0 2 1284 400 296 112 0 chr17 91667494 91667678 -3604973 + MIR SINE MIR 64 263 -5 2 1284 760 307 134 16 chr17 91668695 91669179 -3603472 - L1MCb LINE L1 -4883 1162 622 2 1284 207 209 0 23 chr17 91669398 91669442 -3603209 + CT-rich Low_complexity Low_complexity 2 44 0 2 1284 2521 327 47 56 chr17 91669462 91670573 -3602078 - Lx5 LINE L1 -15 7035 5946 2 1284 558 0 0 0 chr17 91670573 91670635 -3602016 + (TC)n Simple_repeat Simple_repeat 1 62 0 2 1284 3056 191 78 8 chr17 91670635 91671322 -3601329 - Lx5 LINE L1 -1105 5945 5205 2 1284 3891 68 36 15 chr17 91671325 91671458 -3601193 - LTRIS2 LTR ERV1 0 564 437 2 1284 2481 117 44 89 chr17 91671458 91671963 -3600688 - RLTR45 LTR ERVK 0 482 1 2 1284 3891 68 36 15 chr17 91671963 91672377 -3600274 - LTRIS2 LTR ERV1 -128 436 5 2 1284 3405 188 32 8 chr17 91672382 91673091 -3599560 - Lx5 LINE L1 -678 5202 4477 2 1284 3060 54 201 2 chr17 91673091 91673518 -3599133 - RLTR1B LTR ERV1 0 512 1 2 1284 1739 162 69 137 chr17 91673521 91673579 -3599072 + ORR1B1 LTR MaLR 1 57 -337 2 1284 1827 219 21 46 chr17 91673579 91674010 -3598641 - RLTR9B2 LTR ERVK 0 420 1 2 1284 1739 162 69 137 chr17 91674010 91674374 -3598277 + ORR1B1 LTR MaLR 58 394 0 2 1284 1463 199 52 22 chr17 91674374 91674743 -3597908 - Lx5 LINE L1 -1396 4481 4102 2 1284 1784 199 68 101 chr17 91674739 91675344 -3597307 - Lx5 LINE L1 -2621 3256 2672 2 1284 446 213 32 0 chr17 91677507 91677601 -3595050 + ID_B1 SINE B4 119 215 -9 2 1284 21 0 0 0 chr17 91678393 91678414 -3594237 + AT_rich Low_complexity Low_complexity 1 21 0 2 1284 261 0 0 0 chr17 91678473 91678502 -3594149 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1284 1112 51 0 7 chr17 91678502 91678640 -3594011 - B1_Mm SINE Alu -10 137 1 2 1284 420 37 0 0 chr17 91678876 91678930 -3593721 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 1284 475 279 98 57 chr17 91679489 91679683 -3592968 - RMER15 LTR ERVL -97 478 277 2 1284 7245 72 19 4 chr17 91679726 91680695 -3591956 + L1Md_F2 LINE L1 5587 6569 -13 2 1284 3956 92 2 9 chr17 91680708 91681258 -3591393 - L1_Mus2 LINE L1 -9 6557 6012 2 1284 3007 201 16 64 chr17 91681301 91681971 -3590680 - RLTR26 LTR ERVK -4 638 1 2 1284 224 226 18 6 chr17 91682387 91682561 -3590090 + GA-rich Low_complexity Low_complexity 1 176 0 2 1284 751 288 42 113 chr17 91683158 91683495 -3589156 + MTE2a LTR MaLR 11 323 -56 2 1284 368 234 252 6 chr17 91683536 91683714 -3588937 + ORR1D1-int LTR MaLR 36 257 -1323 2 1284 261 0 0 0 chr17 91683768 91683797 -3588854 + (TGG)n Simple_repeat Simple_repeat 1 29 0 2 1284 371 327 115 70 chr17 91683872 91684245 -3588406 + ORR1D1-int LTR MaLR 355 1068 -512 2 1284 608 254 32 15 chr17 91684220 91684519 -3588132 + ORR1D1 LTR MaLR 13 374 0 2 1284 536 256 28 28 chr17 91684549 91684690 -3587961 + MTE2a LTR MaLR 235 375 -4 2 1284 239 133 21 43 chr17 91685133 91685180 -3587471 + B1_Mur4 SINE Alu 99 144 -6 2 1284 259 219 15 30 chr17 91686196 91686262 -3586389 - ORR1D1 LTR MaLR -303 71 7 2 1284 848 206 131 0 chr17 91686898 91687097 -3585554 + URR1B DNA MER1_type 1 225 0 2 1284 369 290 57 45 chr17 91687097 91687139 -3585512 - CYRA11_Mm Unknown Y-chromosome -440 177 134 2 1284 1038 216 23 23 chr17 91687140 91687401 -3585250 + Lx3A LINE L1 56 316 -6668 2 1284 3147 143 29 0 chr17 91687401 91688015 -3584636 + Lx3A LINE L1 613 1308 -5676 2 1284 25323 100 38 4 chr17 91688013 91690913 -3581738 + Lx3A LINE L1 1885 4858 -1028 2 1284 387 0 0 0 chr17 91690913 91690956 -3581695 + (TC)n Simple_repeat Simple_repeat 2 44 0 2 1284 369 0 0 0 chr17 91690956 91690996 -3581655 + (TA)n Simple_repeat Simple_repeat 2 42 0 2 1284 25323 108 29 14 chr17 91690996 91693061 -3579590 + Lx3A LINE L1 4859 6979 -2 2 1284 408 312 0 53 chr17 91693406 91693538 -3579113 - B1F SINE Alu -16 133 9 2 1284 213 373 0 0 chr17 91693481 91693548 -3579103 - B4A SINE B4 -142 150 84 2 1284 2862 20 26 66 chr17 91693680 91693986 -3578665 - RLTR10B2 LTR ERVK 0 365 80 2 1284 225 0 0 0 chr17 91693986 91694011 -3578640 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2 1284 2862 20 26 66 chr17 91694011 91694084 -3578567 - RLTR10B2 LTR ERVK -286 79 2 2 1284 205 305 24 24 chr17 91694103 91694187 -3578464 - L2a LINE L2 -9 3417 3334 2 1284 432 340 14 7 chr17 91695201 91695346 -3577305 + B1F1 SINE Alu 1 146 -3 2 1284 325 256 0 16 chr17 91695347 91695474 -3577177 + GA-rich Low_complexity Low_complexity 4 128 0 2 1284 484 329 86 0 chr17 91695618 91695770 -3576881 - B3A SINE B2 -31 167 3 2 1284 286 247 26 13 chr17 91695941 91696019 -3576632 + Lx9 LINE L1 7255 7333 -311 2 1284 198 0 0 0 chr17 91696150 91696172 -3576479 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 1284 357 24 0 0 chr17 91696172 91696213 -3576438 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1284 14830 182 37 126 chr17 91696319 91697181 -3575470 + L1_Mur3 LINE L1 1174 2024 -3856 2 1284 2929 58 0 27 chr17 91697181 91697556 -3575095 - RLTR10B2 LTR ERVK 0 365 1 2 1284 14830 181 37 128 chr17 91697556 91698209 -3574442 + L1_Mur3 LINE L1 2025 2647 -3233 2 1284 504 93 0 0 chr17 91698209 91698284 -3574367 + (CA)n Simple_repeat Simple_repeat 2 76 0 2 1284 14830 181 37 128 chr17 91698284 91698790 -3573861 + L1_Mur3 LINE L1 2648 3128 -2752 2 1284 519 290 113 115 chr17 91698790 91699207 -3573444 + RLTR23 LTR ERV1 8 423 -7 2 1284 468 35 0 0 chr17 91699213 91699271 -3573380 + (CAAG)n Simple_repeat Simple_repeat 1 58 0 2 1284 14830 181 37 128 chr17 91699271 91701388 -3571263 + L1_Mur3 LINE L1 3136 5319 -561 2 1284 216 0 0 0 chr17 91701388 91701412 -3571239 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1284 1125 59 0 0 chr17 91701413 91701548 -3571103 - B1_Mus1 SINE Alu -12 136 2 2 1284 14830 181 37 128 chr17 91701548 91701598 -3571053 + L1_Mur3 LINE L1 5320 5371 -509 2 1284 21 89 0 0 chr17 91701618 91701674 -3570977 + AT_rich Low_complexity Low_complexity 1 56 0 2 1284 247 368 15 39 chr17 91702039 91702169 -3570482 + MTC-int LTR MaLR 732 858 -400 2 1284 1348 249 105 44 chr17 91702371 91702828 -3569823 - MTA_Mm-int LTR MaLR -545 713 229 2 1284 6486 216 23 1 chr17 91702828 91704261 -3568390 - L1_Mur2 LINE L1 -397 5480 4017 2 1284 1903 324 31 53 chr17 91704277 91705411 -3567240 + Lx5 LINE L1 5948 7021 -37 2 1284 626 296 53 30 chr17 91705427 91705659 -3566992 - MTA_Mm-int LTR MaLR -835 263 30 2 1284 537 295 202 38 chr17 91705669 91705986 -3566665 - MTA_Mm LTR MaLR -27 369 1 2 1284 27 29 0 0 chr17 91706117 91706151 -3566500 + AT_rich Low_complexity Low_complexity 1 34 0 2 1284 6140 45 0 0 chr17 91706642 91707391 -3565260 + L1Md_F3 LINE L1 4837 5585 -298 2 1284 7802 35 22 0 chr17 91707392 91708355 -3564296 + L1Md_F3 LINE L1 5587 6570 -14 2 1284 2820 55 3 6 chr17 91708360 91708726 -3563925 + L1Md_F2 LINE L1 6218 6582 0 2 1284 28 0 0 0 chr17 91709486 91709514 -3563137 + AT_rich Low_complexity Low_complexity 1 28 0 2 1284 468 0 0 0 chr17 91710484 91710536 -3562115 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 1284 180 0 0 0 chr17 91710906 91710926 -3561725 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1284 2475 139 3 1 chr17 91712015 91712437 -3560214 + Lx LINE L1 5889 6267 -317 2 1284 353 146 0 0 chr17 91712441 91712496 -3560155 - Lx2A1 LINE L1 -685 6323 6269 2 1284 3193 152 23 12 chr17 91712494 91713094 -3559557 - L1_Mur2 LINE L1 -1073 4804 4198 2 1284 6245 183 14 41 chr17 91713092 91715010 -3557641 - L1VL2 LINE L1 -1512 2103 249 2 1284 512 268 37 52 chr17 91715620 91715750 -3556901 - B3A SINE B2 -55 143 16 2 1284 5313 94 17 1 chr17 91715750 91716515 -3556136 + RLTR22_Mus LTR ERVK 1 777 -1031 2 1284 324 0 0 0 chr17 91717605 91717641 -3555010 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 3 1284 686 69 39 19 chr17 91718049 91718152 -3554499 - Lx3_Mus LINE L1 -330 5556 5452 3 1284 2930 93 43 26 chr17 91718151 91718695 -3553956 + Lx3_Mus LINE L1 5549 6074 -935 3 1284 401 84 14 0 chr17 91718725 91718796 -3553855 + (TAAA)n Simple_repeat Simple_repeat 3 74 0 3 1284 4026 157 97 9 chr17 91718801 91719872 -3552779 + L1VL2 LINE L1 53 1233 -2382 3 1284 12682 138 27 10 chr17 91720051 91722260 -3550391 + L1_Mm LINE L1 2485 4731 -1152 3 1284 230 0 0 32 chr17 91722260 91722291 -3550360 + (CAA)n Simple_repeat Simple_repeat 1 30 0 3 1284 12682 138 27 10 chr17 91722291 91722312 -3550339 + L1_Mm LINE L1 4732 4752 -1131 3 1284 24 32 0 0 chr17 91722539 91722570 -3550081 + AT_rich Low_complexity Low_complexity 1 31 0 3 1284 383 301 92 86 chr17 91723789 91724025 -3548626 - LTR33A_ LTR ERVL -284 247 8 3 1284 982 238 23 32 chr17 91724261 91724398 -3548253 - B3 SINE B2 0 216 81 3 1284 1552 193 39 37 chr17 91724398 91724623 -3548028 + RMER17C LTR ERVK 1 234 -176 3 1284 495 48 0 0 chr17 91724623 91724685 -3547966 + (TC)n Simple_repeat Simple_repeat 2 63 0 3 1284 1552 193 39 37 chr17 91724685 91724868 -3547783 + RMER17C LTR ERVK 235 410 0 3 1284 982 238 23 32 chr17 91724868 91724947 -3547704 - B3 SINE B2 -136 80 2 3 1284 728 286 45 14 chr17 91726747 91726967 -3545684 + ORR1E LTR MaLR 1 227 -132 3 1284 510 0 0 0 chr17 91726971 91727030 -3545621 + MT2_Mm LTR ERVL 435 493 0 3 1284 290 230 30 15 chr17 91727094 91727181 -3545470 + ORR1E LTR MaLR 261 405 -14 3 1284 597 14 0 0 chr17 91728083 91728153 -3544498 + (CA)n Simple_repeat Simple_repeat 2 71 0 3 1284 393 39 0 0 chr17 91728697 91728748 -3543903 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1284 235 348 0 18 chr17 91728766 91728860 -3543791 + (CATATA)n Simple_repeat Simple_repeat 4 94 0 3 1284 309 26 0 0 chr17 91728860 91728898 -3543753 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 1284 235 348 0 18 chr17 91728898 91728970 -3543681 + (CATATA)n Simple_repeat Simple_repeat 5 76 0 3 1284 192 40 0 0 chr17 91728986 91729011 -3543640 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1284 24 77 0 0 chr17 91729113 91729165 -3543486 + AT_rich Low_complexity Low_complexity 1 52 0 3 1284 464 279 99 50 chr17 91729426 91729607 -3543044 - B3A SINE B2 -8 190 1 3 1284 232 331 41 35 chr17 91730182 91730351 -3542300 - L1M5 LINE L1 -324 5800 5631 3 1284 462 65 0 0 chr17 91730494 91730556 -3542095 + (TCCC)n Simple_repeat Simple_repeat 4 65 0 3 1284 268 270 125 16 chr17 91730569 91730697 -3541954 - B1F2 SINE Alu -7 142 1 3 1284 338 329 27 27 chr17 91730699 91730846 -3541805 - MLT1A0 LTR MaLR -218 147 1 3 1284 557 249 55 45 chr17 91731408 91731610 -3541041 + B3 SINE B2 2 205 -11 3 1284 225 0 0 0 chr17 91731876 91731901 -3540750 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 3 1284 1087 97 0 0 chr17 91731901 91732045 -3540606 - B1_Mus2 SINE Alu -2 145 2 3 1284 1114 98 18 0 chr17 91732053 91732216 -3540435 - B2_Mm1t SINE B2 -26 167 2 3 1284 3522 163 45 34 chr17 91732396 91733100 -3539551 + RMER6D LTR ERVK 9 720 0 3 1284 207 0 0 0 chr17 91733962 91733985 -3538666 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3 1284 356 358 90 35 chr17 91734356 91734756 -3537895 - HERV16-int LTR ERVL -3429 1567 1146 3 1284 1690 207 72 16 chr17 91738032 91738405 -3534246 - MTC LTR MaLR 0 421 28 3 1284 434 331 105 45 chr17 91738429 91738521 -3534130 - B4A SINE B4 -10 282 188 3 1284 3001 82 12 0 chr17 91738521 91738937 -3533714 + BGLII LTR ERVK 1 421 0 3 1284 434 331 105 45 chr17 91738937 91739110 -3533541 - B4A SINE B4 -105 187 1 3 1284 23630 170 34 8 chr17 91739350 91745464 -3527187 - L1_Mus4 LINE L1 -4 6632 360 3 1284 201 191 159 0 chr17 91746444 91746507 -3526144 + L3 LINE CR1 709 781 -3708 3 1284 1145 247 78 43 chr17 91747018 91747456 -3525195 - RLTR20A LTR ERVK 0 563 90 3 1284 243 0 0 0 chr17 91747456 91747483 -3525168 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1284 779 314 81 61 chr17 91747483 91747549 -3525102 - RLTR20A LTR ERVK -454 109 50 3 1284 477 0 0 0 chr17 91747871 91747924 -3524727 + (TA)n Simple_repeat Simple_repeat 2 54 0 3 1284 22 56 0 0 chr17 91748100 91748136 -3524515 + AT_rich Low_complexity Low_complexity 1 36 0 3 1284 204 97 0 0 chr17 91748313 91748344 -3524307 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1284 288 179 0 0 chr17 91748644 91748700 -3523951 - L1Md_F2 LINE L1 -14 6568 6513 3 1284 25 0 0 0 chr17 91748811 91748836 -3523815 + AT_rich Low_complexity Low_complexity 1 25 0 3 1284 531 151 0 0 chr17 91749662 91749755 -3522896 + CT-rich Low_complexity Low_complexity 4 96 0 3 1285 286 85 0 33 chr17 91751768 91751829 -3520822 + (TTTTG)n Simple_repeat Simple_repeat 5 63 0 3 1285 22 0 0 0 chr17 91752979 91753001 -3519650 + AT_rich Low_complexity Low_complexity 1 22 0 3 1285 915 360 42 7 chr17 91753295 91753728 -3518923 + Lx8 LINE L1 6246 6693 -780 3 1285 1590 249 60 0 chr17 91753788 91754173 -3518478 + MTD LTR MaLR 12 419 0 3 1285 728 280 216 25 chr17 91754173 91754609 -3518042 + Lx8 LINE L1 6955 7473 0 3 1285 31 0 0 0 chr17 91754625 91754656 -3517995 + AT_rich Low_complexity Low_complexity 1 31 0 3 1285 281 321 35 12 chr17 91755036 91755121 -3517530 + B1F2 SINE Alu 8 94 -55 3 1285 636 14 0 0 chr17 91755135 91755208 -3517443 + (GAAA)n Simple_repeat Simple_repeat 2 74 0 3 1285 255 170 0 0 chr17 91755211 91755258 -3517393 + GA-rich Low_complexity Low_complexity 1 47 0 3 1285 385 286 22 0 chr17 91755263 91755354 -3517297 - B1_Mur2 SINE Alu -56 93 1 3 1285 23 0 0 0 chr17 91755437 91755460 -3517191 + AT_rich Low_complexity Low_complexity 1 23 0 3 1285 1174 218 19 38 chr17 91755702 91755964 -3516687 + RLTR18 LTR ERVK 1 257 -359 3 1285 3586 159 49 19 chr17 91755967 91756363 -3516288 + Lx5 LINE L1 1629 2048 -3829 3 1285 528 56 0 0 chr17 91756363 91756435 -3516216 + (CA)n Simple_repeat Simple_repeat 2 73 0 3 1285 3586 159 49 19 chr17 91756435 91756809 -3515842 + Lx5 LINE L1 2049 2422 -3455 3 1285 3243 218 21 42 chr17 91756814 91757662 -3514989 + Lx5 LINE L1 4397 5226 -651 3 1285 4207 226 31 11 chr17 91757711 91758653 -3513998 + Lx5 LINE L1 5589 6549 -501 3 1285 921 131 110 15 chr17 91758681 91759004 -3513647 + RLTR27 LTR ERVK 1 309 0 3 1285 1643 245 30 75 chr17 91759004 91759472 -3513179 + Lx5 LINE L1 6604 7050 0 3 1285 2365 226 77 105 chr17 91760403 91761330 -3511321 - RMER17B LTR ERVK -85 823 1 3 1285 2724 178 52 55 chr17 91761332 91761964 -3510687 - RMER17A-int LTR ERVK -2 1726 1097 3 1285 451 196 52 0 chr17 91762043 91762140 -3510511 - RMER17A-int LTR ERVK -644 1084 983 3 1285 819 202 13 49 chr17 91762177 91762401 -3510250 - RMER17A-int LTR ERVK -737 991 776 3 1285 304 73 83 24 chr17 91762866 91762950 -3509701 + (CAGAGA)n Simple_repeat Simple_repeat 2 90 0 3 1285 546 243 7 20 chr17 91762952 91763099 -3509552 - RMER17A-int LTR ERVK -1581 147 3 3 1285 3462 208 58 75 chr17 91763101 91763801 -3508850 - RMER17B LTR ERVK 0 958 298 3 1285 3138 47 54 0 chr17 91763801 91764208 -3508443 - L1Md_F2 LINE L1 -2 6580 6152 3 1285 3462 208 58 75 chr17 91764208 91764481 -3508170 - RMER17B LTR ERVK -661 297 1 3 1285 1646 204 100 32 chr17 91765842 91765919 -3506732 - RLTR16 LTR ERVK 0 505 413 3 1285 432 0 0 0 chr17 91765919 91765967 -3506684 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1285 1646 204 100 32 chr17 91765967 91766360 -3506291 - RLTR16 LTR ERVK -93 412 3 3 1285 21 57 0 0 chr17 91766456 91766491 -3506160 + AT_rich Low_complexity Low_complexity 1 35 0 3 1285 1234 344 67 57 chr17 91766890 91768004 -3504647 - Lx9 LINE L1 -171 7302 6197 3 1285 21 71 0 0 chr17 91768676 91768718 -3503933 + AT_rich Low_complexity Low_complexity 1 42 0 3 1285 694 192 0 0 chr17 91768769 91768889 -3503762 + MT2B LTR ERVL 482 601 0 3 1285 4706 127 141 15 chr17 91769455 91769946 -3502705 + L1VL2 LINE L1 94 675 -5660 3 1285 2689 47 70 9 chr17 91769946 91770290 -3502361 - RLTR10B2 LTR ERVK 0 365 1 3 1285 7285 111 34 10 chr17 91770290 91771730 -3500921 + L1VL2 LINE L1 676 2137 -1478 3 1285 1508 100 5 0 chr17 91771731 91771941 -3500710 + L1_Mus4 LINE L1 5592 5802 -834 3 1285 1613 91 0 4 chr17 91771932 91772165 -3500486 - L1_Mm LINE L1 -1383 4500 4269 3 1285 400 153 0 0 chr17 91772158 91772230 -3500421 - L1_Mur3 LINE L1 -1690 4187 4116 3 1285 1937 276 79 3 chr17 91772219 91772825 -3499826 - L1_Mur3 LINE L1 -6826 902 251 3 1285 225 0 0 0 chr17 91773171 91773196 -3499455 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1285 547 175 28 18 chr17 91773349 91773480 -3499171 + MTE2a LTR MaLR 1 140 -238 3 1285 1516 247 116 26 chr17 91773472 91773773 -3498878 + RLTR25A LTR ERVK 175 481 -622 3 1285 597 201 123 7 chr17 91773773 91773928 -3498723 + B2_Mm2 SINE B2 4 176 -19 3 1285 1516 197 107 40 chr17 91773928 91774150 -3498501 + RLTR25A LTR ERVK 429 672 -431 3 1285 21 36 0 0 chr17 91774150 91774178 -3498473 + AT_rich Low_complexity Low_complexity 1 28 0 3 1285 774 292 19 28 chr17 91774251 91774466 -3498185 + B3 SINE B2 2 214 -2 3 1285 226 222 0 0 chr17 91774611 91774656 -3497995 - Lx9 LINE L1 -1076 6568 6524 3 1285 272 246 54 14 chr17 91774656 91774730 -3497921 - Lx9 LINE L1 -1084 6560 6484 3 1285 554 152 8 0 chr17 91774742 91774867 -3497784 + GA-rich Low_complexity Low_complexity 1 126 0 3 1285 237 333 36 120 chr17 91774884 91775051 -3497600 + ID_B1 SINE B4 6 158 -66 3 1285 633 27 0 0 chr17 91775252 91775327 -3497324 + (GA)n Simple_repeat Simple_repeat 2 76 0 3 1285 651 277 30 18 chr17 91776096 91776265 -3496386 + MTE2a LTR MaLR 209 379 0 3 1285 1631 273 27 12 chr17 91777010 91777496 -3495155 - RLTR16 LTR ERVK -12 493 1 3 1285 385 314 51 0 chr17 91777683 91777801 -3494850 + B1F SINE Alu 24 147 -2 3 1285 243 0 0 0 chr17 91777812 91777839 -3494812 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1285 533 335 37 16 chr17 91777913 91778104 -3494547 + MTE2b LTR MaLR 2 196 -183 3 1285 1564 168 110 42 chr17 91778116 91778210 -3494441 + BGLII_B LTR ERVK 1 130 -311 3 1285 252 0 0 0 chr17 91778210 91778238 -3494413 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 3 1285 1564 168 110 42 chr17 91778238 91778552 -3494099 + BGLII_B LTR ERVK 131 437 -4 3 1285 624 312 25 25 chr17 91778835 91779032 -3493619 + MTE2b LTR MaLR 167 363 -16 3 1285 254 277 134 29 chr17 91779161 91779332 -3493319 - L1MA7 LINE L1 -194 6097 5909 3 1285 528 356 21 16 chr17 91779339 91779533 -3493118 - B3 SINE B2 -19 197 3 3 1285 1218 259 55 10 chr17 91779600 91779998 -3492653 - MTD LTR MaLR 0 419 4 3 1285 435 344 39 15 chr17 91780022 91780152 -3492499 + B3A SINE B2 44 176 -22 3 1285 479 297 84 28 chr17 91780163 91780447 -3492204 - L1MA7 LINE L1 -532 5759 5460 3 1285 493 360 14 14 chr17 91780609 91780750 -3491901 + RSINE1 SINE B4 4 144 -21 3 1285 25 0 0 0 chr17 91780783 91780808 -3491843 + AT_rich Low_complexity Low_complexity 1 25 0 3 1285 1227 216 96 4 chr17 91781817 91782077 -3490574 - MTC LTR MaLR 0 421 138 3 1285 312 197 0 0 chr17 91782472 91782533 -3490118 - MTC LTR MaLR -356 65 5 3 1285 344 344 116 30 chr17 91782705 91782977 -3489674 + MER58B DNA MER1_type 17 312 -29 3 1285 297 333 42 0 chr17 91783598 91783694 -3488957 + PB1D10 SINE Alu 7 106 -11 3 1285 316 247 38 62 chr17 91783945 91784105 -3488546 + L1MA6 LINE L1 6126 6281 -19 3 1285 555 328 58 23 chr17 91784209 91784468 -3488183 - MER2 DNA MER2_type -74 271 4 3 1285 520 246 48 24 chr17 91785160 91785285 -3487366 - ETnERV2-int LTR ERVK -209 7197 7070 4 1285 2609 70 9 3 chr17 91786443 91786787 -3485864 - ORR1A1 LTR MaLR 0 346 1 4 1285 626 159 9 9 chr17 91786934 91787048 -3485603 - RMER1B Other Other -11 1055 942 4 1285 1736 228 91 15 chr17 91787072 91787478 -3485173 - RMER1B Other Other -193 873 437 4 1285 459 0 0 0 chr17 91787638 91787689 -3484962 + (TC)n Simple_repeat Simple_repeat 2 52 0 4 1285 315 0 0 0 chr17 91787689 91787723 -3484928 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1285 2497 300 55 19 chr17 91787752 91788588 -3484063 - Lx7 LINE L1 -423 7273 6408 4 1285 474 18 0 0 chr17 91788588 91788643 -3484008 + (TAAG)n Simple_repeat Simple_repeat 4 58 0 4 1285 2497 300 55 19 chr17 91788643 91788727 -3483924 - Lx7 LINE L1 -1289 6407 6321 4 1285 255 189 0 0 chr17 91788880 91788933 -3483718 + A-rich Low_complexity Low_complexity 1 53 0 4 1285 2931 82 17 119 chr17 91789540 91790077 -3482574 + RLTR45 LTR ERVK 1 482 0 4 1285 895 83 11 45 chr17 91790626 91790802 -3481849 + (TCTCCC)n Simple_repeat Simple_repeat 3 172 0 4 1285 423 0 0 0 chr17 91790839 91790886 -3481765 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1285 201 39 0 0 chr17 91790942 91790968 -3481683 + (TTTTTG)n Simple_repeat Simple_repeat 5 30 0 4 1285 360 377 90 0 chr17 91792327 91792494 -3480157 - MTEb LTR MaLR 0 379 198 4 1285 215 274 0 19 chr17 91792494 91792546 -3480105 + G-rich Low_complexity Low_complexity 6 56 0 4 1285 345 333 94 47 chr17 91792546 91792716 -3479935 - MTEb LTR MaLR -163 216 39 4 1285 682 339 45 30 chr17 91792976 91793241 -3479410 - MLT2B1 LTR ERVL -242 278 10 4 1285 603 306 24 14 chr17 91793350 91793562 -3479089 + B3 SINE B2 1 214 -2 4 1285 345 349 13 33 chr17 91794477 91794628 -3478023 - Charlie15a DNA MER1_type 0 224 77 4 1285 209 297 60 74 chr17 91794645 91794794 -3477857 - MIR3 SINE MIR -22 186 40 4 1285 245 293 13 0 chr17 91794885 91794960 -3477691 - MLT1G3 LTR MaLR -516 79 4 4 1285 555 351 142 62 chr17 91794969 91795642 -3477009 - MLT1G3-int LTR MaLR -6 1483 752 4 1285 186 43 0 0 chr17 91795642 91795665 -3476986 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1285 555 351 142 62 chr17 91795665 91796196 -3476455 - MLT1G3-int LTR MaLR -738 751 183 4 1285 9773 105 20 12 chr17 91796679 91799136 -3473515 - L1Md_F2 LINE L1 -3 7047 4537 4 1285 3981 109 49 0 chr17 91799129 91799725 -3472926 - L1Md_F2 LINE L1 -5455 1161 537 4 1285 4597 228 42 15 chr17 91799725 91800085 -3472566 - Lx5 LINE L1 -398 6652 6299 4 1285 2389 137 36 8 chr17 91800085 91800447 -3472204 - MTB LTR MaLR 0 400 25 4 1285 534 31 0 0 chr17 91800447 91800511 -3472140 + (TC)n Simple_repeat Simple_repeat 1 64 0 4 1285 2389 137 36 8 chr17 91800511 91800537 -3472114 - MTB LTR MaLR -376 24 1 4 1285 9952 195 48 90 chr17 91800537 91802110 -3470541 - Lx5 LINE L1 -752 6298 4636 4 1285 183 42 0 0 chr17 91802110 91802134 -3470517 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1285 9952 184 50 115 chr17 91802134 91803798 -3468853 - Lx5 LINE L1 -1242 4635 3220 4 1285 2316 188 114 11 chr17 91803798 91804527 -3468124 - Lx5 LINE L1 -4159 1718 915 4 1285 313 379 61 17 chr17 91804783 91804963 -3467688 - MLT1G3 LTR MaLR -405 190 3 4 1285 26 30 0 0 chr17 91805392 91805425 -3467226 + AT_rich Low_complexity Low_complexity 1 33 0 4 1285 761 264 116 37 chr17 91806363 91806741 -3465910 - Lx9 LINE L1 -2 7642 7235 4 1285 8784 16 0 0 chr17 91806763 91807759 -3464892 - L1Md_A LINE L1 0 6582 5587 4 1285 213 293 85 101 chr17 91807776 91807811 -3464840 - ID_B1 SINE B4 -4 220 94 4 1285 407 312 0 11 chr17 91807811 91807905 -3464746 - PB1D7 SINE Alu -15 105 13 4 1285 182 37 37 0 chr17 91808436 91808463 -3464188 + (TAA)n Simple_repeat Simple_repeat 3 30 0 4 1285 217 227 29 57 chr17 91808702 91808772 -3463879 - PB1D10 SINE Alu -13 104 37 4 1285 732 282 120 0 chr17 91808868 91809077 -3463574 + MTD LTR MaLR 16 249 -170 4 1285 195 42 0 0 chr17 91809233 91809257 -3463394 + (GA)n Simple_repeat Simple_repeat 1 24 0 4 1285 475 319 75 110 chr17 91809273 91809527 -3463124 - B4 SINE B4 0 292 48 4 1285 1807 184 323 0 chr17 91810165 91810349 -3462302 + L1_Mur2 LINE L1 5079 5276 -601 4 1285 287 65 22 0 chr17 91810349 91810395 -3462256 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 4 1285 1807 184 323 0 chr17 91810395 91810749 -3461902 + L1_Mur2 LINE L1 5277 5790 -87 4 1285 5501 143 19 11 chr17 91810750 91812190 -3460461 + Lx2 LINE L1 5042 6495 -502 4 1285 851 78 4 2 chr17 91812190 91812332 -3460319 + B1_Mm SINE Alu 7 149 0 4 1285 207 0 0 0 chr17 91812340 91812363 -3460288 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1285 2161 165 115 0 chr17 91812365 91812784 -3459867 + Lx2 LINE L1 6531 6997 0 4 1285 5019 234 45 20 chr17 91812788 91813983 -3458668 + Lx5 LINE L1 5783 7007 -43 4 1285 21 0 0 0 chr17 91814036 91814057 -3458594 + AT_rich Low_complexity Low_complexity 1 21 0 4 1285 22 0 0 0 chr17 91814096 91814118 -3458533 + AT_rich Low_complexity Low_complexity 1 22 0 4 1285 1914 250 96 40 chr17 91814131 91814706 -3457945 + RLTR17 LTR ERVK 1 607 -85 4 1285 687 172 0 79 chr17 91814818 91814982 -3457669 - Lx7 LINE L1 -4 7692 7542 4 1285 703 350 7 27 chr17 91815133 91815427 -3457224 - B4A SINE B4 -4 288 1 4 1285 6304 48 23 4 chr17 91815532 91816323 -3456328 - RLTR13C2 LTR ERVK -2 806 1 4 1285 410 346 52 0 chr17 91817463 91817599 -3455052 - RSINE1 SINE B4 -19 146 4 4 1285 272 174 0 0 chr17 91817767 91817813 -3454838 - ORR1D2 LTR MaLR 0 370 325 4 1285 1676 176 28 19 chr17 91817813 91818138 -3454513 - ORR1B2 LTR MaLR 0 367 40 4 1285 647 298 190 18 chr17 91818151 91818294 -3454357 - ORR1D2 LTR MaLR -35 335 178 4 1285 768 22 0 0 chr17 91818294 91818384 -3454267 + (GA)n Simple_repeat Simple_repeat 1 90 0 4 1285 647 298 190 18 chr17 91818384 91818524 -3454127 - ORR1D2 LTR MaLR -193 177 3 4 1285 646 95 0 50 chr17 91818570 91818670 -3453981 + RLTR23 LTR ERV1 11 105 -325 4 1285 233 29 29 0 chr17 91818699 91818733 -3453918 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 4 1285 1409 189 67 76 chr17 91818743 91819087 -3453564 + RLTR23 LTR ERV1 90 430 0 4 1285 519 352 55 74 chr17 91819996 91820429 -3452222 - Lx8 LINE L1 -248 7225 6801 4 1285 1728 167 42 60 chr17 91821057 91821389 -3451262 + ORR1A3 LTR MaLR 1 326 0 4 1285 2038 199 14 0 chr17 91821826 91822197 -3450454 - ORR1C1 LTR MaLR -2 376 1 4 1285 439 313 97 60 chr17 91823029 91823277 -3449374 - B4A SINE B4 -12 280 24 4 1285 258 174 45 9 chr17 91823300 91823410 -3449241 + (TA)n Simple_repeat Simple_repeat 1 114 0 4 1285 463 290 103 142 chr17 91823547 91823828 -3448823 - MTE2a LTR MaLR -104 275 6 4 1285 370 341 0 0 chr17 91823849 91823981 -3448670 - Lx8 LINE L1 -349 7124 6993 4 1285 298 370 22 7 chr17 91824125 91824261 -3448390 + Lx8 LINE L1 7163 7300 -173 4 1285 322 185 25 0 chr17 91825491 91825572 -3447079 + CT-rich Low_complexity Low_complexity 3 85 0 4 1285 23 0 0 0 chr17 91825786 91825809 -3446842 + AT_rich Low_complexity Low_complexity 1 23 0 4 1285 23 33 0 0 chr17 91826381 91826411 -3446240 + AT_rich Low_complexity Low_complexity 1 30 0 4 1285 189 74 0 0 chr17 91826682 91826709 -3445942 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 4 1285 242 386 38 8 chr17 91827301 91827434 -3445217 - MLT1E3 LTR MaLR -188 439 303 4 1285 297 328 70 30 chr17 91827463 91827664 -3444987 - MLT1E3 LTR MaLR -415 209 1 4 1285 3937 258 55 5 chr17 91828088 91829025 -3443626 - Lx5 LINE L1 -35 7015 6032 4 1285 375 316 100 77 chr17 91829287 91829637 -3443014 - ORR1D1 LTR MaLR -4 370 13 4 1285 23 54 0 0 chr17 91830500 91830537 -3442114 + AT_rich Low_complexity Low_complexity 1 37 0 4 1285 1163 75 0 0 chr17 91830728 91830874 -3441777 + B1_Mus1 SINE Alu 3 148 0 4 1285 25 0 0 0 chr17 91830874 91830899 -3441752 + AT_rich Low_complexity Low_complexity 1 25 0 4 1285 4211 57 37 2 chr17 91831187 91831728 -3440923 - LTRIS2 LTR ERV1 0 564 5 4 1285 264 231 0 0 chr17 91832131 91832183 -3440468 + URR1B DNA MER1_type 169 220 -5 4 1285 35 34 0 17 chr17 91832614 91832631 -3440020 + AT_rich Low_complexity Low_complexity 1 17 0 4 1285 4146 79 5 14 chr17 91832631 91833198 -3439453 + L1_Mus3 LINE L1 6071 6632 -6 4 1285 35 34 0 17 chr17 91833198 91833240 -3439411 + AT_rich Low_complexity Low_complexity 1 42 0 4 1285 533 193 224 13 chr17 91833247 91833399 -3439252 - URR1A DNA MER1_type -42 184 1 4 1285 1238 275 48 17 chr17 91833699 91834050 -3438601 - ORR1D2 LTR MaLR 0 370 9 4 1285 265 315 14 0 chr17 91834922 91834995 -3437656 - ID4_ SINE ID -4 79 6 4 1285 181 265 61 0 chr17 91835025 91835074 -3437577 + MIRc SINE MIR 111 162 -106 4 1285 251 337 21 32 chr17 91835514 91835609 -3437042 + MTE2b LTR MaLR 5 98 -281 4 1285 3352 167 4 10 chr17 91835613 91836291 -3436360 - Lx3C LINE L1 -1084 5974 5310 4 1285 2379 214 105 2 chr17 91836293 91836846 -3435805 + Lx3C LINE L1 6365 6974 -2 4 1285 490 362 57 23 chr17 91836865 91837250 -3435401 + MT2A LTR ERVL 134 531 -2 4 1285 600 266 74 15 chr17 91837859 91838061 -3434590 + RMER15 LTR ERVL 329 542 -33 4 1285 24 0 0 0 chr17 91838451 91838475 -3434176 + AT_rich Low_complexity Low_complexity 1 24 0 4 1285 504 32 0 0 chr17 91838681 91838743 -3433908 + (CA)n Simple_repeat Simple_repeat 2 63 0 4 1285 190 27 108 0 chr17 91838886 91838923 -3433728 + (CAAAAA)n Simple_repeat Simple_repeat 1 41 0 4 1285 455 324 56 5 chr17 91838989 91839203 -3433448 + L1_Rod LINE L1 5537 5761 -86 4 1285 7756 174 44 29 chr17 91839201 91841839 -3430812 + L1VL4 LINE L1 562 3263 -2620 4 1285 186 43 0 0 chr17 91841839 91841862 -3430789 + (TC)n Simple_repeat Simple_repeat 2 24 0 4 1285 6229 259 82 78 chr17 91841862 91842341 -3430310 + L1VL4 LINE L1 3264 3771 -2112 4 1285 353 184 36 80 chr17 91842341 91842453 -3430198 - RMER17A2 LTR ERVK -3 903 701 4 1285 6229 259 82 78 chr17 91842453 91843224 -3429427 + L1VL4 LINE L1 3772 4592 -1291 4 1285 350 272 0 11 chr17 91843269 91843362 -3429289 + Lx7 LINE L1 5828 5919 -1777 4 1285 402 143 83 0 chr17 91843586 91843691 -3428960 + L1_Mur3 LINE L1 4158 4269 -1611 4 1285 2376 61 19 0 chr17 91843892 91844205 -3428446 - L1Md_F2 LINE L1 -12 6570 6252 4 1285 273 147 89 6 chr17 91845466 91845623 -3427028 + (TA)n Simple_repeat Simple_repeat 2 171 0 4 1285 372 197 13 38 chr17 91845972 91846051 -3426600 + B3 SINE B2 132 208 -8 4 1285 258 296 14 96 chr17 91846274 91846418 -3426233 + B4A SINE B4 29 161 -131 4 1285 469 221 64 24 chr17 91846353 91846478 -3426173 + B1_Mur1 SINE Alu 14 143 -6 4 1285 279 0 0 0 chr17 91846740 91846771 -3425880 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 1285 2467 229 37 37 chr17 91848152 91848770 -3423881 + RLTR17 LTR ERVK 1 618 -74 5 1285 231 36 0 0 chr17 91848954 91848982 -3423669 + (TTA)n Simple_repeat Simple_repeat 2 29 0 5 1285 351 280 18 27 chr17 91849081 91849191 -3423460 - ID_B1 SINE B4 -30 194 86 5 1285 542 266 16 0 chr17 91849186 91849310 -3423341 - MLT2B1 LTR ERVL -388 132 7 5 1285 523 350 76 0 chr17 91849575 91849772 -3422879 + ID_B1 SINE B4 2 213 -11 5 1285 188 175 16 0 chr17 91849969 91850032 -3422619 + (TA)n Simple_repeat Simple_repeat 2 65 0 5 1285 21 95 0 0 chr17 91850038 91850101 -3422550 + AT_rich Low_complexity Low_complexity 1 63 0 5 1285 240 286 0 31 chr17 91850132 91850197 -3422454 + polypyrimidine Low_complexity Low_complexity 2 64 0 5 1285 369 0 0 0 chr17 91850199 91850240 -3422411 + (TC)n Simple_repeat Simple_repeat 1 41 0 5 1285 201 39 0 0 chr17 91850240 91850265 -3422386 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 1285 224 319 41 71 chr17 91850415 91850513 -3422138 - PB1D10 SINE Alu -11 106 12 5 1285 287 49 0 24 chr17 91850609 91850651 -3422000 + (GGA)n Simple_repeat Simple_repeat 2 42 0 5 1285 2408 195 10 20 chr17 91852288 91852817 -3419834 + L1_Mur2 LINE L1 668 1256 -6456 5 1285 941 164 6 0 chr17 91852817 91852976 -3419675 + B2_Mm2 SINE B2 2 161 -34 5 1285 478 53 173 0 chr17 91853523 91853598 -3419053 - BC1_Mm scRNA scRNA -64 88 1 5 1285 285 29 0 0 chr17 91853635 91853669 -3418982 + (TCTCTG)n Simple_repeat Simple_repeat 3 36 0 5 1285 414 333 16 0 chr17 91853677 91853800 -3418851 - B1_Mur1 SINE Alu -14 135 11 5 1285 560 92 116 27 chr17 91854265 91854377 -3418274 - Lx LINE L1 0 6654 6533 5 1285 4458 120 34 23 chr17 91854395 91854735 -3417916 + Lx4A LINE L1 1248 1585 -4292 5 1285 1848 42 0 20 chr17 91854735 91854979 -3417672 + L1Md_F3 LINE L1 6345 6583 -1 5 1285 4458 120 34 23 chr17 91854979 91855431 -3417220 + Lx4A LINE L1 1586 2049 -3828 5 1285 456 128 0 0 chr17 91855431 91855509 -3417142 + (CA)n Simple_repeat Simple_repeat 1 78 0 5 1285 402 158 96 35 chr17 91855534 91855627 -3417024 - RMER17D LTR ERVK -2 887 712 5 1285 11458 159 47 21 chr17 91855662 91856126 -3416525 + Lx4A LINE L1 3566 4056 -1821 5 1285 597 28 0 0 chr17 91856126 91856197 -3416454 + (TC)n Simple_repeat Simple_repeat 1 71 0 5 1285 11458 166 42 17 chr17 91856197 91858533 -3414118 + Lx4A LINE L1 4057 6450 -608 5 1285 267 290 80 0 chr17 91858564 91858664 -3413987 + ORR1D2 LTR MaLR 255 362 -8 5 1285 631 259 12 29 chr17 91859468 91859639 -3413012 - RLTR22_Mur LTR ERVK -1184 664 497 5 1285 2618 204 34 7 chr17 91859645 91860203 -3412448 + Lx4A LINE L1 6485 7057 -1 5 1285 261 246 0 0 chr17 91861644 91861701 -3410950 + (TATG)n Simple_repeat Simple_repeat 1 57 0 5 1285 621 69 0 0 chr17 91862085 91862172 -3410479 + (CA)n Simple_repeat Simple_repeat 2 88 0 5 1285 2272 82 3 7 chr17 91862804 91863112 -3409539 + Lx3_Mus LINE L1 6264 6570 -439 5 1285 2942 167 80 5 chr17 91863194 91864133 -3408518 - Lx2 LINE L1 -11 6986 5978 5 1285 8338 157 10 13 chr17 91864518 91865902 -3406749 - Lx3B LINE L1 0 6973 5594 5 1285 1569 279 61 38 chr17 91865905 91866483 -3406168 - RLTR1 LTR ERV1 -4 620 30 5 1285 11767 136 21 6 chr17 91866490 91867434 -3405217 - L1_Mur1 LINE L1 -286 5600 4637 5 1285 212 0 36 0 chr17 91867434 91867462 -3405189 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1285 11767 136 21 6 chr17 91867462 91868515 -3404136 - L1_Mur1 LINE L1 -1250 4636 3573 5 1285 7229 166 43 68 chr17 91868512 91871043 -3401608 - L1_Mur1 LINE L1 -3209 2677 210 5 1285 414 53 0 0 chr17 91871196 91871253 -3401398 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1285 24 32 0 0 chr17 91871700 91871731 -3400920 + AT_rich Low_complexity Low_complexity 1 31 0 5 1285 351 0 0 0 chr17 91871795 91871834 -3400817 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 1285 554 316 34 11 chr17 91871852 91872031 -3400620 + B3A SINE B2 1 183 -15 5 1285 29 0 0 0 chr17 91872050 91872079 -3400572 + AT_rich Low_complexity Low_complexity 1 29 0 5 1285 229 356 119 0 chr17 91872104 91872222 -3400429 + ID_B1 SINE B4 91 222 -2 5 1285 206 323 0 0 chr17 91872241 91872303 -3400348 - MIRb SINE MIR -25 243 182 5 1285 23 0 0 0 chr17 91872786 91872809 -3399842 + AT_rich Low_complexity Low_complexity 1 23 0 5 1285 687 236 99 0 chr17 91873057 91873248 -3399403 + Lx7 LINE L1 7240 7449 -247 5 1285 237 252 131 65 chr17 91873295 91873448 -3399203 + Lx7 LINE L1 7534 7696 0 5 1285 4243 166 8 1 chr17 91873470 91874230 -3398421 + L1_Mur2 LINE L1 4996 5760 -117 5 1285 1922 161 3 3 chr17 91874231 91874542 -3398109 + RLTR10E LTR ERVK 1 311 0 5 1285 1242 110 89 20 chr17 91874542 91874813 -3397838 + RLTR10-int LTR ERVK 1 337 -7244 5 1285 597 165 0 0 chr17 91874813 91874934 -3397717 + RLTR10-int LTR ERVK 747 867 -6714 5 1285 1041 196 67 18 chr17 91874921 91875179 -3397472 + IAPEY3-int LTR ERVK 311 547 -4859 5 1285 464 326 36 35 chr17 91875182 91875622 -3397029 + IAPEY3-int LTR ERVK 1197 1566 -6015 5 1285 332 127 36 0 chr17 91875639 91875694 -3396957 + IAP-d-int LTR ERVK 447 503 -6039 5 1285 1278 144 122 0 chr17 91875694 91875916 -3396735 + IAP-d-int LTR ERVK 5007 5255 -1287 5 1285 4288 111 8 1 chr17 91875916 91876599 -3396052 + IAPEY3-int LTR ERVK 6965 7680 0 5 1285 1788 184 3 3 chr17 91876599 91876910 -3395741 + RLTR10E LTR ERVK 1 311 0 5 1285 1430 185 86 0 chr17 91876913 91877215 -3395436 + Lx2 LINE L1 5765 6092 -905 5 1285 360 218 175 35 chr17 91877243 91877357 -3395294 + RSINE1 SINE B4 2 131 -34 5 1285 294 50 0 0 chr17 91878080 91878120 -3394531 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1285 687 240 31 20 chr17 91878554 91878750 -3393901 + RMER5 LTR ERV1 13 210 -324 5 1285 8608 105 3 8 chr17 91878750 91880049 -3392602 - L1_Mus1 LINE L1 -1541 4342 3050 5 1285 5995 118 21 2 chr17 91880056 91880970 -3391681 + L1_Mus1 LINE L1 4292 5222 -661 5 1285 2402 121 42 44 chr17 91880970 91881446 -3391205 + IAPLTR2_Mm LTR ERVK 1 475 0 5 160 7325 95 4 3 chr17 91881446 91882795 -3389856 + L1_Mus1 LINE L1 5217 6565 -2 5 1286 1250 223 83 25 chr17 91882798 91883125 -3389526 + RMER5 LTR ERV1 188 533 -1 5 1286 29 0 0 0 chr17 91883175 91883204 -3389447 + AT_rich Low_complexity Low_complexity 1 29 0 5 1286 312 216 24 105 chr17 91883761 91883836 -3388815 + MER67D LTR ERV1 44 111 -403 5 1286 1798 138 87 38 chr17 91883836 91884227 -3388424 + RMER17C LTR ERVK 1 410 0 5 1286 312 216 24 105 chr17 91884227 91884275 -3388376 + MER67D LTR ERV1 112 157 -357 5 1286 30 45 0 0 chr17 91884542 91884586 -3388065 + AT_rich Low_complexity Low_complexity 1 44 0 5 1286 1278 85 0 0 chr17 91884705 91884882 -3387769 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 5 1286 330 115 0 0 chr17 91884882 91884934 -3387717 + (TCCC)n Simple_repeat Simple_repeat 3 54 0 5 1286 186 43 0 0 chr17 91884934 91884957 -3387694 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 5 1286 1079 91 0 0 chr17 91884959 91885102 -3387549 - B1_Mm SINE Alu -4 143 1 5 1286 544 77 0 0 chr17 91886924 91887001 -3385650 + L1Md_A LINE L1 5525 5615 -682 5 1286 8212 43 0 0 chr17 91887001 91887994 -3384657 + L1Md_A LINE L1 5587 6579 -3 5 1286 25 75 0 0 chr17 91888564 91888617 -3384034 + AT_rich Low_complexity Low_complexity 1 53 0 5 1286 37646 45 0 4 chr17 91889137 91895382 -3377269 - L1Md_T LINE L1 0 6585 271 5 1286 1906 162 22 0 chr17 91895649 91895969 -3376682 + ORR1A2 LTR MaLR 1 327 0 5 1286 1121 35 41 0 chr17 91896769 91896940 -3375711 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 5 1286 1039 225 199 39 chr17 91897280 91897461 -3375190 - RMER19A LTR ERVK -314 423 244 5 1286 270 0 0 0 chr17 91897461 91897491 -3375160 + (CAGAG)n Simple_repeat Simple_repeat 5 34 0 5 1286 1039 225 199 39 chr17 91897491 91897665 -3374986 - RMER19A LTR ERVK -494 243 13 5 1286 1270 220 36 39 chr17 91897709 91898120 -3374531 + RMER17C LTR ERVK 1 410 0 5 1286 2399 267 40 20 chr17 91898331 91899022 -3373629 + Lx7 LINE L1 5789 6493 -1203 5 1286 860 325 60 59 chr17 91900138 91901162 -3371489 + MuRRS4-int LTR ERV1 1310 2392 -5209 5 1286 1789 317 59 58 chr17 91901256 91902846 -3369805 + MuRRS4-int LTR ERV1 2757 5547 -2009 5 1286 2690 99 142 0 chr17 91903076 91903542 -3369109 + RLTR47_MM LTR ERV1 1 532 0 5 1286 1276 263 19 0 chr17 91903548 91903856 -3368795 + Lx7 LINE L1 6504 6817 -879 5 1286 5351 187 20 58 chr17 91903857 91905003 -3367648 - RLTR25A LTR ERVK 0 1103 1 5 1286 2298 270 55 63 chr17 91905004 91905557 -3367094 + Lx7 LINE L1 6814 7340 -356 5 1286 1099 108 0 0 chr17 91905557 91905705 -3366946 - B1_Mus1 SINE Alu 0 148 1 5 1286 2298 270 55 63 chr17 91905705 91905892 -3366759 + Lx7 LINE L1 7341 7549 -147 5 1286 263 26 51 0 chr17 91905892 91905931 -3366720 + (TTTTA)n Simple_repeat Simple_repeat 4 44 0 5 1286 2298 270 55 63 chr17 91905931 91906051 -3366600 + Lx7 LINE L1 7550 7668 -28 5 1286 23 54 0 0 chr17 91906224 91906261 -3366390 + AT_rich Low_complexity Low_complexity 1 37 0 5 1286 1412 148 113 48 chr17 91906599 91906891 -3365760 - ORR1A3 LTR MaLR -8 318 8 5 1286 22 35 0 0 chr17 91907352 91907381 -3365270 + AT_rich Low_complexity Low_complexity 1 29 0 5 1286 26 0 0 0 chr17 91907643 91907669 -3364982 + AT_rich Low_complexity Low_complexity 1 26 0 5 1286 408 40 0 0 chr17 91907750 91907800 -3364851 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1286 238 267 17 0 chr17 91907812 91907872 -3364779 + GA-rich Low_complexity Low_complexity 2 62 0 5 1286 190 75 24 48 chr17 91907983 91908025 -3364626 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 5 1286 6484 77 63 1 chr17 91908610 91909520 -3363131 + Lx3_Mus LINE L1 5960 6925 -84 5 1286 246 301 0 11 chr17 91909536 91909630 -3363021 + (TA)n Simple_repeat Simple_repeat 1 93 0 5 1286 2372 220 31 61 chr17 91909709 91910295 -3362356 - RLTR20D LTR ERVK 0 568 1 5 1286 226 280 32 0 chr17 91910324 91910417 -3362234 + (TA)n Simple_repeat Simple_repeat 1 96 0 5 1286 227 284 0 15 chr17 91910344 91910412 -3362239 + (TATATG)n Simple_repeat Simple_repeat 6 72 0 5 1286 779 330 51 7 chr17 91910417 91910692 -3361959 - B4A SINE B4 0 292 6 5 1286 515 349 51 9 chr17 91910699 91910916 -3361735 - B4A SINE B4 -65 227 2 5 1286 2615 224 68 39 chr17 91911153 91912637 -3360014 - L1_Mur3 LINE L1 -582 5295 2328 5 1286 300 27 0 0 chr17 91914131 91914168 -3358483 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1286 236 314 32 41 chr17 91914189 91914203 -3358448 - RSINE1 SINE B4 -41 124 3 5 1286 590 220 0 0 chr17 91914203 91914312 -3358339 - B3A SINE B2 -88 110 2 5 1286 3673 284 53 13 chr17 91914342 91915389 -3357262 - Lx5 LINE L1 -11 7039 5951 5 1286 1058 200 138 0 chr17 91915386 91915611 -3357040 - L1_Mur2 LINE L1 -210 5667 5412 5 1286 272 0 79 0 chr17 91916495 91916533 -3356118 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 5 1286 4242 222 90 72 chr17 91916862 91918167 -3354484 - RMER12B LTR ERVK -155 1417 1 5 1286 210 45 68 0 chr17 91918278 91918322 -3354329 + (CAA)n Simple_repeat Simple_repeat 3 49 0 5 1286 22 80 0 0 chr17 91918900 91918950 -3353701 + AT_rich Low_complexity Low_complexity 1 50 0 5 1286 22 56 0 0 chr17 91919693 91919729 -3352922 + AT_rich Low_complexity Low_complexity 1 36 0 5 1286 23 68 0 0 chr17 91919821 91919865 -3352786 + AT_rich Low_complexity Low_complexity 1 44 0 6 1286 243 268 24 0 chr17 91920382 91920464 -3352187 + RMER30 DNA MER1_type 17 100 -102 6 1286 322 156 52 0 chr17 91921124 91921201 -3351450 - Lx9 LINE L1 -1 7643 7563 6 1286 2860 259 110 45 chr17 91921288 91922342 -3350309 + L1_Mur3 LINE L1 194 1315 -6413 6 1286 474 199 123 29 chr17 91922340 91922476 -3350175 + L1_Mur3 LINE L1 1913 2059 -3821 6 1286 387 0 0 0 chr17 91922476 91922519 -3350132 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 1286 474 199 123 29 chr17 91922519 91922553 -3350098 + L1_Mur3 LINE L1 2060 2099 -3781 6 1286 1691 224 108 33 chr17 91922553 91922658 -3349993 + RLTR31B_Mm LTR ERVK 1 107 -450 6 1286 840 39 0 0 chr17 91922658 91922762 -3349889 + (GA)n Simple_repeat Simple_repeat 1 104 0 6 1286 1691 224 108 33 chr17 91922762 91923174 -3349477 + RLTR31B_Mm LTR ERVK 108 556 -1 6 1286 3075 202 86 24 chr17 91923174 91924004 -3348647 + L1_Mur3 LINE L1 2094 2974 -2906 6 1286 40457 15 0 6 chr17 91924003 91930215 -3342436 - L1Md_A LINE L1 0 6582 413 6 1286 3588 183 60 41 chr17 91930215 91930250 -3342401 + L1_Mur3 LINE L1 2961 2991 -2889 6 1286 243 88 0 0 chr17 91930250 91930284 -3342367 + (CAAG)n Simple_repeat Simple_repeat 2 35 0 6 1286 3588 183 60 41 chr17 91930284 91931129 -3341522 + L1_Mur3 LINE L1 2992 3858 -2022 6 1286 1896 157 16 86 chr17 91931141 91931581 -3341070 + RMER17C LTR ERVK 1 409 -1 6 1286 991 263 80 99 chr17 91931582 91931818 -3340833 - RMER4B LTR ERVK -5 580 365 6 1286 2571 187 33 14 chr17 91931818 91932307 -3340344 - Lx LINE L1 -8 6646 6149 6 1286 991 263 80 99 chr17 91932307 91932636 -3340015 - RMER4B LTR ERVK -221 364 26 6 1286 5790 174 19 18 chr17 91932647 91933816 -3338835 + L1_Mur3 LINE L1 3853 5022 -858 6 1286 1621 239 22 89 chr17 91933816 91934414 -3338237 + RMER17B LTR ERVK 139 696 -262 6 1286 323 59 39 0 chr17 91934414 91934447 -3338204 + (TTTCC)n Simple_repeat Simple_repeat 4 36 0 6 1286 1308 79 0 0 chr17 91934447 91934625 -3338026 + (TCTCC)n Simple_repeat Simple_repeat 1 178 0 6 1286 323 59 39 0 chr17 91934625 91934642 -3338009 + (TTTCC)n Simple_repeat Simple_repeat 5 23 0 6 1286 5276 64 0 1 chr17 91934647 91935320 -3337331 - L1_Mus1 LINE L1 0 6567 5896 6 1286 2181 60 3 0 chr17 91935320 91935613 -3337038 + L1_Mus1 LINE L1 5624 5926 -656 6 1286 962 157 345 4 chr17 91935953 91936202 -3336449 - RMER6C LTR ERVK -349 341 8 6 1286 452 133 51 0 chr17 91936205 91936303 -3336348 + Lx7 LINE L1 5231 5333 -547 6 1286 530 181 53 30 chr17 91936303 91936434 -3336217 + Lx7 LINE L1 5769 5902 -1794 6 1286 198 216 0 0 chr17 91937226 91937300 -3335351 + (CA)n Simple_repeat Simple_repeat 2 75 0 6 1286 364 316 96 5 chr17 91937712 91937909 -3334742 + B3 SINE B2 2 216 0 6 1286 374 319 120 18 chr17 91938444 91938770 -3333881 + L1ME2 LINE L1 5496 5854 -310 6 1286 279 289 33 26 chr17 91938925 91939078 -3333573 + L1MA10 LINE L1 6177 6330 -4 6 1286 354 267 38 23 chr17 91939458 91939591 -3333060 + B4A SINE B4 2 145 -147 6 1286 1906 208 129 27 chr17 91939737 91940216 -3332435 - RLTR11A LTR ERVK 0 528 1 6 1286 875 123 81 12 chr17 91940317 91940490 -3332161 + L1_Mur1 LINE L1 5154 5338 -548 6 1286 6583 122 28 13 chr17 91940489 91941694 -3330957 - L1_Mus4 LINE L1 -2 6634 5409 6 1286 505 87 0 0 chr17 91941693 91941762 -3330889 + L1_Mm LINE L1 4784 4852 -1031 6 1286 181 214 0 97 chr17 91941897 91941959 -3330692 - L3 LINE CR1 -2095 2394 2339 6 1286 2999 175 41 105 chr17 91942215 91942968 -3329683 + L1_Mur2 LINE L1 4836 5540 -337 6 1286 378 0 0 0 chr17 91942983 91943025 -3329626 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 1286 183 80 0 0 chr17 91943146 91943171 -3329480 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 6 1286 467 329 57 13 chr17 91943965 91944282 -3328369 - Charlie4a DNA MER1_type -69 439 109 6 1286 17270 75 16 0 chr17 91944287 91946795 -3325856 + L1Md_F2 LINE L1 1410 3957 -1926 6 1286 2882 34 2 102 chr17 91946795 91947226 -3325425 + RLTR10 LTR ERVK 1 388 -2 6 1286 23 0 0 0 chr17 91949304 91949327 -3323324 + AT_rich Low_complexity Low_complexity 1 23 0 6 1286 2995 18 0 0 chr17 91951682 91952016 -3320635 + IAPLTR1a_Mm LTR ERVK 4 337 0 6 1286 11956 69 2 0 chr17 91952016 91953646 -3319005 + L1Md_F2 LINE L1 3952 5584 -299 6 1286 8087 51 3 0 chr17 91953648 91954641 -3318010 + L1Md_F2 LINE L1 5587 6582 0 6 1286 23 0 0 0 chr17 91954835 91954858 -3317793 + AT_rich Low_complexity Low_complexity 1 23 0 6 1286 3506 61 43 13 chr17 91956169 91956637 -3316014 + RLTR45 LTR ERVK 1 482 0 6 1286 600 97 0 0 chr17 91957116 91957209 -3315442 + (TATG)n Simple_repeat Simple_repeat 2 94 0 6 1286 490 322 23 87 chr17 91957217 91957435 -3315216 - ID_B1 SINE B4 -8 216 13 6 1286 360 217 17 42 chr17 91957578 91957698 -3314953 - Lx4A LINE L1 0 7058 6942 6 1286 1708 136 0 70 chr17 91957698 91957983 -3314668 + ORR1A2 LTR MaLR 1 265 -62 6 1286 5809 121 14 21 chr17 91957986 91958112 -3314539 + Lx LINE L1 5663 5786 -868 6 1286 969 83 45 0 chr17 91958112 91958244 -3314407 + B1_Mus1 SINE Alu 1 138 -10 6 1286 326 42 21 0 chr17 91958244 91958292 -3314359 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 6 1286 5809 121 14 21 chr17 91958292 91958965 -3313686 + Lx LINE L1 5787 6458 -196 6 1286 2605 110 55 0 chr17 91958965 91959364 -3313287 + BGLII LTR ERVK 1 421 0 6 1286 5809 121 14 21 chr17 91959364 91959553 -3313098 + Lx LINE L1 6459 6644 -10 6 1286 281 200 0 0 chr17 91959553 91959608 -3313043 + ORR1A2 LTR MaLR 272 326 0 6 1286 1683 169 51 3 chr17 91959608 91959940 -3312711 + ORR1A2-int LTR MaLR 1 348 -1615 6 1286 5127 129 14 0 chr17 91959950 91960781 -3311870 - RMER16-int LTR ERVK -11 5395 4553 6 1286 1630 153 8 20 chr17 91960785 91961153 -3311498 + RMER16 LTR ERVK 1 436 -97 6 1286 2988 59 204 2 chr17 91961156 91961582 -3311069 + RLTR1B LTR ERV1 1 512 0 6 1286 33241 36 2 11 chr17 91961582 91965746 -3306905 + MMERGLN-int LTR ERV1 1 4130 -3426 6 1286 3055 153 93 44 chr17 91965786 91966755 -3305896 + RLTR13D1 LTR ERVK 1 1023 0 6 1286 263 215 81 81 chr17 91966755 91966819 -3305832 + B1_Mus1 SINE Alu 63 126 -22 6 1286 1270 164 4 16 chr17 91966765 91967019 -3305632 + ORR1A2-int LTR MaLR 795 1045 -918 6 1286 12969 110 28 30 chr17 91967019 91968815 -3303836 + L1VL4 LINE L1 209 1958 -1601 6 1286 216 0 0 0 chr17 91968815 91968839 -3303812 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1286 252 0 0 0 chr17 91968839 91968867 -3303784 + (CCA)n Simple_repeat Simple_repeat 1 28 0 6 1286 12969 94 37 43 chr17 91968867 91969580 -3303071 + L1VL4 LINE L1 1959 2704 -855 6 1286 333 0 0 0 chr17 91969580 91969617 -3303034 + (TA)n Simple_repeat Simple_repeat 1 37 0 6 1286 12969 94 37 43 chr17 91969617 91970063 -3302588 + L1VL4 LINE L1 2705 3155 -404 6 1286 2865 146 20 7 chr17 91970063 91970518 -3302133 + ORR1A2-int LTR MaLR 1503 1963 0 6 1286 1735 178 3 87 chr17 91970518 91970557 -3302094 + ORR1A2 LTR MaLR 1 37 -290 6 1286 6020 36 15 0 chr17 91970557 91971282 -3301369 - L1Md_F2 LINE L1 -2 6580 5845 6 1286 1735 178 3 87 chr17 91971282 91971599 -3301052 + ORR1A2 LTR MaLR 38 327 0 6 1286 1716 110 97 0 chr17 91971978 91972288 -3300363 - L1Md_A LINE L1 -6183 541 202 6 1286 34653 32 2 7 chr17 91972287 91977385 -3295266 + L1Md_T LINE L1 524 5586 -297 6 1286 8376 36 1 0 chr17 91977385 91978380 -3294271 + L1Md_T LINE L1 5587 6582 0 6 1286 678 356 5 0 chr17 91979884 91980075 -3292576 - B3 SINE B2 -17 199 8 6 1286 24 0 0 0 chr17 91980213 91980237 -3292414 + AT_rich Low_complexity Low_complexity 1 24 0 6 1286 293 180 164 0 chr17 91980294 91980355 -3292296 + ID4 SINE ID 2 72 -11 6 1286 1759 191 119 5 chr17 91982013 91982391 -3290260 - MTC LTR MaLR 0 421 1 6 1286 24 32 0 0 chr17 91982424 91982455 -3290196 + AT_rich Low_complexity Low_complexity 1 31 0 6 1286 4003 242 45 8 chr17 91984805 91984911 -3287740 - RMER1A Other Other -10 1020 911 6 1286 660 48 0 0 chr17 91984911 91984995 -3287656 + (CA)n Simple_repeat Simple_repeat 1 84 0 6 1286 4003 258 40 9 chr17 91984995 91986035 -3286616 - RMER1A Other Other -120 910 16 6 1286 312 311 27 9 chr17 91986057 91986236 -3286415 - RMER1A Other Other -581 449 302 6 1286 688 292 65 11 chr17 91986230 91986490 -3286161 - RMER1B Other Other -659 407 134 6 1286 237 33 0 0 chr17 91986739 91986769 -3285882 + (ATTTG)n Simple_repeat Simple_repeat 2 31 0 6 1286 405 0 0 0 chr17 91987261 91987306 -3285345 + (A)n Simple_repeat Simple_repeat 1 45 0 6 1286 1162 82 0 0 chr17 91989487 91989633 -3283018 + B1_Mus2 SINE Alu 2 147 0 6 1286 304 98 49 0 chr17 91989633 91989694 -3282957 + (GAAA)n Simple_repeat Simple_repeat 3 66 0 6 1286 1170 153 79 0 chr17 91989694 91989910 -3282741 + Lx2A1 LINE L1 6770 7002 -6 6 1286 446 88 15 0 chr17 91990773 91990841 -3281810 + (TC)n Simple_repeat Simple_repeat 1 69 0 6 1286 506 205 0 59 chr17 91990844 91990963 -3281688 - RLTR11A LTR ERVK -4 524 413 6 1286 16246 193 14 81 chr17 91991121 91993178 -3279473 + Lx LINE L1 579 2641 -3242 6 1286 360 0 0 0 chr17 91993178 91993218 -3279433 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 6 1286 16246 198 20 113 chr17 91993218 91996507 -3276144 + Lx LINE L1 2642 5450 -433 6 1286 2076 78 3 63 chr17 91996507 91996823 -3275828 + L1_Mus2 LINE L1 6270 6566 0 6 1286 16246 196 22 22 chr17 91996823 91998031 -3274620 + Lx LINE L1 5451 6648 -6 6 1286 249 138 25 12 chr17 91998044 91998125 -3274526 + A-rich Low_complexity Low_complexity 1 82 0 6 1286 5910 146 23 13 chr17 91998128 91999304 -3273347 + Lx LINE L1 5452 6639 -15 6 1286 206 62 31 0 chr17 91999320 91999352 -3273299 + (GA)n Simple_repeat Simple_repeat 2 34 0 6 1286 21 71 0 0 chr17 92000469 92000511 -3272140 + AT_rich Low_complexity Low_complexity 1 42 0 1 1286 2172 271 112 41 chr17 92001222 92002004 -3270647 - Lx6 LINE L1 -6 7454 6617 2 1286 271 295 48 16 chr17 92002014 92002200 -3270451 + Lx7 LINE L1 5997 6188 -1508 3 1286 1332 147 16 29 chr17 92002204 92002450 -3270201 + Lx LINE L1 6403 6645 -9 4 1286 789 183 90 17 chr17 92002487 92002665 -3269986 + B2_Mm2 SINE B2 2 192 -3 5 1286 248 271 45 34 chr17 92002709 92002797 -3269854 + Lx9 LINE L1 7237 7325 -319 6 1286 380 218 42 7 chr17 92002965 92003108 -3269543 + Lx9 LINE L1 7497 7644 0 6 1286 229 208 21 0 chr17 92003863 92003911 -3268740 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1286 39 22 0 0 chr17 92003964 92004010 -3268641 + AT_rich Low_complexity Low_complexity 1 46 0 8 1286 378 151 0 0 chr17 92004181 92004254 -3268397 + (CA)n Simple_repeat Simple_repeat 2 74 0 9 1286 24 0 0 0 chr17 92004273 92004297 -3268354 + AT_rich Low_complexity Low_complexity 1 24 0 1 1286 293 340 117 107 chr17 92004796 92005096 -3267555 + MLT1E1A LTR MaLR 325 680 0 1 1286 663 13 0 0 chr17 92005217 92005293 -3267358 + (TC)n Simple_repeat Simple_repeat 2 77 0 1 1286 276 77 0 0 chr17 92005294 92005333 -3267318 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1286 739 315 78 18 chr17 92005516 92005849 -3266802 + Tigger5 DNA MER2_type 123 475 -1931 1 1286 401 69 0 0 chr17 92005849 92005907 -3266744 - MusHAL1 LINE L1 -2439 273 216 1 1286 2700 66 0 6 chr17 92005907 92006258 -3266393 + L1Md_F2 LINE L1 6215 6563 -19 1 1286 579 323 53 74 chr17 92006262 92006656 -3265995 + Tigger5 DNA MER2_type 458 843 -1563 1 1286 2710 322 119 12 chr17 92006949 92008308 -3264343 + Tigger5 DNA MER2_type 818 2321 -85 1 1286 333 364 64 106 chr17 92009009 92009292 -3263359 - MTE2b LTR MaLR -108 271 1 1 1286 283 319 35 59 chr17 92009501 92009671 -3262980 + Lx9 LINE L1 5844 6009 -1635 1 160 8820 138 64 6 chr17 92010468 92012814 -3259837 + L1VL2 LINE L1 56 2540 -1075 1 1287 6355 145 6 14 chr17 92012841 92013484 -3259167 + L1_Mus3 LINE L1 5090 5733 -150 2 1287 2345 143 14 144 chr17 92013484 92014038 -3258613 - RLTR45 LTR ERVK 0 482 1 2 1287 6355 132 16 27 chr17 92014038 92014951 -3257700 + L1_Mus3 LINE L1 5734 6636 -2 2 1287 613 323 30 30 chr17 92015266 92015496 -3257155 + MER2 DNA MER2_type 93 322 -23 2 1287 189 0 0 0 chr17 92015582 92015603 -3257048 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1287 320 411 49 18 chr17 92015985 92016208 -3256443 - B4A SINE B4 -61 231 2 2 1287 473 316 106 27 chr17 92016629 92016958 -3255693 - LTR37A LTR ERV1 -26 400 46 2 1287 23 33 0 0 chr17 92017193 92017223 -3255428 + AT_rich Low_complexity Low_complexity 1 30 0 2 1287 210 220 0 0 chr17 92017236 92017283 -3255368 + T-rich Low_complexity Low_complexity 13 59 0 2 1287 1074 82 7 0 chr17 92017283 92017429 -3255222 - B1_Mm SINE Alu 0 147 1 2 1287 210 220 0 0 chr17 92017429 92017440 -3255211 + T-rich Low_complexity Low_complexity 2 12 0 2 1287 180 0 0 0 chr17 92019319 92019339 -3253312 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 3 1287 549 135 0 0 chr17 92019589 92019678 -3252973 + (TG)n Simple_repeat Simple_repeat 1 89 0 3 1287 5946 40 23 1 chr17 92020165 92020890 -3251761 + L1Md_T LINE L1 5826 6566 -16 3 1287 194 0 0 37 chr17 92021219 92021246 -3251405 + (TTATA)n Simple_repeat Simple_repeat 1 26 0 3 1287 1096 70 14 0 chr17 92021664 92021807 -3250844 + B1_Mm SINE Alu 1 145 -2 3 1287 531 0 0 0 chr17 92021807 92021866 -3250785 + (GA)n Simple_repeat Simple_repeat 2 60 0 3 1287 211 128 20 41 chr17 92022132 92022181 -3250470 + (TTATA)n Simple_repeat Simple_repeat 5 52 0 3 1287 281 242 0 15 chr17 92024045 92024112 -3248539 + CT-rich Low_complexity Low_complexity 1 66 0 3 1287 1177 207 89 12 chr17 92024728 92025055 -3247596 - Lx9 LINE L1 -31 7613 7262 3 1287 342 327 191 32 chr17 92025162 92025385 -3247266 - Arthur1 DNA Tip100 -3562 385 120 3 1287 2945 35 73 0 chr17 92025385 92025754 -3246897 - MTA_Mm LTR MaLR 0 396 1 4 1287 342 327 191 32 chr17 92025754 92025808 -3246843 - Arthur1 DNA Tip100 -3828 119 64 3 1287 31 82 0 0 chr17 92026398 92026471 -3246180 + AT_rich Low_complexity Low_complexity 1 73 0 4 1287 296 350 14 35 chr17 92026899 92027044 -3245607 + B1F SINE Alu 1 142 -7 4 1287 409 105 53 0 chr17 92027059 92027154 -3245497 + (TAGA)n Simple_repeat Simple_repeat 3 102 0 4 1287 372 77 0 0 chr17 92027168 92027220 -3245431 + (CATA)n Simple_repeat Simple_repeat 2 53 0 4 1287 355 80 0 39 chr17 92027220 92027272 -3245379 + HAL1-3A_ME LINE L1 1974 2023 -835 4 1287 291 364 59 35 chr17 92027430 92028007 -3244644 + L1MCa LINE L1 601 1191 -4854 4 1287 311 362 39 39 chr17 92028031 92028235 -3244416 + L1MCa LINE L1 1313 1516 -5235 4 1287 418 305 136 53 chr17 92028781 92029120 -3243531 + L1MCa LINE L1 3419 3785 -2779 4 1287 250 62 0 0 chr17 92029234 92029266 -3243385 + L1Md_F2 LINE L1 6322 6353 -229 4 1287 1619 248 107 9 chr17 92029267 92029686 -3242965 + Lx5 LINE L1 6582 7041 -9 4 1287 261 0 0 0 chr17 92030088 92030117 -3242534 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1287 1767 278 81 20 chr17 92030609 92031164 -3241487 + L1_Mur3 LINE L1 225 813 -6915 5 1287 484 259 98 17 chr17 92032004 92032177 -3240474 - RLTR11A2 LTR ERVK -2 525 339 5 1287 6851 216 60 15 chr17 92032177 92033892 -3238759 + L1_Mur3 LINE L1 3905 5696 -184 5 1287 4727 257 45 13 chr17 92033891 92034916 -3237735 + Lx6 LINE L1 6220 7272 -188 5 1287 522 0 0 0 chr17 92034916 92034974 -3237677 + (TTATA)n Simple_repeat Simple_repeat 2 59 0 5 1287 4727 257 45 13 chr17 92034974 92035140 -3237511 + Lx6 LINE L1 7273 7450 -10 5 1287 1117 65 0 0 chr17 92035159 92035297 -3237354 + B1_Mus2 SINE Alu 1 138 -9 5 1287 600 77 0 0 chr17 92035599 92035690 -3236961 + (TCTCTG)n Simple_repeat Simple_repeat 1 91 0 5 1287 713 65 0 0 chr17 92035700 92035792 -3236859 - B1_Mus2 SINE Alu -54 93 2 5 1287 25 51 0 0 chr17 92036710 92036749 -3235902 + AT_rich Low_complexity Low_complexity 1 39 0 5 1287 321 331 16 41 chr17 92036767 92036890 -3235761 + PB1D7 SINE Alu 1 120 0 5 1287 21 57 0 0 chr17 92036924 92036959 -3235692 + AT_rich Low_complexity Low_complexity 1 35 0 5 1287 265 24 0 0 chr17 92037059 92037100 -3235551 + L1Md_T LINE L1 6542 6582 0 6 1287 492 18 0 0 chr17 92038276 92038333 -3234318 + (TA)n Simple_repeat Simple_repeat 1 57 0 6 1287 31 26 0 0 chr17 92039254 92039292 -3233359 + AT_rich Low_complexity Low_complexity 1 38 0 6 1287 781 220 31 0 chr17 92039511 92039702 -3232949 - Lx2A1 LINE L1 0 7008 6812 6 1287 518 212 35 19 chr17 92039717 92039857 -3232794 - ORR1D1 LTR MaLR 0 374 226 6 1287 37881 31 1 0 chr17 92040519 92047091 -3225560 - L1Md_T LINE L1 0 6585 1 6 1287 678 224 35 41 chr17 92048052 92048224 -3224427 - RMER1C Other Other -17 1325 1155 6 1287 1269 227 264 31 chr17 92048487 92048942 -3223709 + RLTR20B1 LTR ERVK 3 563 0 6 1287 219 69 0 0 chr17 92049100 92049129 -3223522 + (TAAAA)n Simple_repeat Simple_repeat 4 32 0 6 1287 1136 177 5 0 chr17 92049246 92049449 -3223202 - Lx2 LINE L1 -19 6978 6775 6 1287 2858 147 23 4 chr17 92049449 92049922 -3222729 - Lx2 LINE L1 -354 6643 6162 6 1287 2288 174 14 0 chr17 92049920 92050345 -3222306 + L1_Mur2 LINE L1 4634 5064 -813 7 1287 26 30 0 0 chr17 92050413 92050446 -3222205 + AT_rich Low_complexity Low_complexity 1 33 0 7 1287 746 277 79 16 chr17 92051023 92051328 -3221323 - L1MB2 LINE L1 -7 6164 5841 7 1287 1362 119 30 17 chr17 92051410 92051641 -3221010 - Lx2 LINE L1 0 6997 6764 7 1287 1574 193 46 6 chr17 92051641 92051950 -3220701 + L1_Mur1 LINE L1 4974 5297 -589 7 1287 2717 60 9 0 chr17 92051950 92052297 -3220354 + L1Md_F2 LINE L1 6220 6569 -13 7 1287 1574 193 46 6 chr17 92052297 92052315 -3220336 + L1_Mur1 LINE L1 5298 5314 -572 7 1287 291 149 0 0 chr17 92052862 92052909 -3219742 - B3 SINE B2 -169 47 1 7 1287 240 333 79 30 chr17 92053508 92053672 -3218979 - MTEb LTR MaLR -4 375 204 7 1287 1533 181 10 17 chr17 92054572 92054870 -3217781 - Lx LINE L1 -5 6649 6354 7 1287 6853 109 18 7 chr17 92054873 92055848 -3216803 - MusHAL1 LINE L1 -778 1934 944 7 1287 222 37 0 0 chr17 92055848 92055875 -3216776 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 8 1287 6853 109 18 7 chr17 92055875 92056017 -3216634 - MusHAL1 LINE L1 -1769 943 806 7 1287 185 0 40 0 chr17 92057918 92057943 -3214708 + (CAA)n Simple_repeat Simple_repeat 2 27 0 8 1287 212 0 36 0 chr17 92058186 92058214 -3214437 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 8 1287 309 343 112 69 chr17 92058753 92058941 -3213710 - B4 SINE B4 -94 198 3 8 1287 22 35 0 0 chr17 92059578 92059607 -3213044 + AT_rich Low_complexity Low_complexity 1 29 0 8 1287 247 329 0 0 chr17 92061933 92062003 -3210648 + ID4 SINE ID 1 70 -13 8 1287 357 82 0 0 chr17 92062061 92062110 -3210541 + (GA)n Simple_repeat Simple_repeat 2 50 0 8 1287 997 133 30 99 chr17 92063108 92063309 -3209342 + B2_Mm2 SINE B2 2 188 -7 8 1287 1502 269 132 56 chr17 92064004 92064544 -3208107 - RMER20B LTR ERVK -37 590 10 8 1287 195 42 0 0 chr17 92064545 92064569 -3208082 + (CAA)n Simple_repeat Simple_repeat 1 24 0 8 1287 6538 47 2 4 chr17 92067835 92068646 -3204005 - L1Md_F2 LINE L1 -2 6580 5771 9 1287 4843 137 39 7 chr17 92068647 92070202 -3202449 - L1VL2 LINE L1 -1930 1685 96 9 1287 3112 50 0 22 chr17 92071419 92071825 -3200826 + L1Md_F2 LINE L1 6182 6578 -4 9 1287 355 194 0 65 chr17 92071947 92072024 -3200627 - ID4_ SINE ID -7 76 5 9 1287 255 197 0 53 chr17 92072531 92072606 -3200045 + A-rich Low_complexity Low_complexity 6 76 0 9 1287 237 233 49 16 chr17 92072606 92072667 -3199984 + B4A SINE B4 82 144 -148 9 1287 399 226 13 33 chr17 92073088 92073106 -3199545 + G-rich Low_complexity Low_complexity 5 21 0 9 1287 1045 123 0 11 chr17 92073106 92073287 -3199364 + (GGA)n Simple_repeat Simple_repeat 1 179 0 9 1287 1063 107 6 11 chr17 92073296 92073475 -3199176 + (GAA)n Simple_repeat Simple_repeat 3 180 0 9 1287 399 226 13 33 chr17 92073475 92073597 -3199054 + G-rich Low_complexity Low_complexity 31 151 0 9 1287 681 218 0 0 chr17 92073563 92073733 -3198918 + GA-rich Low_complexity Low_complexity 1 170 0 1 1287 1118 122 0 6 chr17 92073746 92073927 -3198724 + (GAA)n Simple_repeat Simple_repeat 1 180 0 1 1287 186 71 0 0 chr17 92073928 92073956 -3198695 + (GGAGAA)n Simple_repeat Simple_repeat 5 32 0 1 1287 1474 6 11 0 chr17 92073957 92074132 -3198519 + (GAA)n Simple_repeat Simple_repeat 1 177 0 1 1287 257 358 23 46 chr17 92074147 92074320 -3198331 - L2 LINE L2 -565 2854 2686 1 1287 238 394 29 29 chr17 92075462 92075632 -3197019 - Arthur1 DNA Tip100 -3609 338 169 1 1287 26 0 0 0 chr17 92075688 92075714 -3196937 + AT_rich Low_complexity Low_complexity 1 26 0 1 1287 598 297 156 0 chr17 92075858 92076070 -3196581 - Lx6 LINE L1 -172 7288 7044 1 1287 2073 262 24 49 chr17 92076071 92076775 -3195876 + RLTR22_Mur LTR ERVK 1 695 -1153 1 1287 2238 87 107 57 chr17 92077163 92077368 -3195283 - BGLII LTR ERVK 0 421 202 1 1287 630 0 0 0 chr17 92077368 92077438 -3195213 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 1287 2238 87 107 57 chr17 92077438 92077633 -3195018 - BGLII LTR ERVK -220 201 2 1 1287 3058 203 36 64 chr17 92077634 92078577 -3194074 - RMER3D-int LTR ERVK -1 2841 1925 1 1287 575 200 56 28 chr17 92078596 92078740 -3193911 - RMER3D-int LTR ERVK -1163 1679 1532 1 1287 1923 185 12 21 chr17 92078760 92079277 -3193374 - RMER3D-int LTR ERVK -1299 1543 1014 1 1287 270 0 0 0 chr17 92079282 92079312 -3193339 + (CTTTG)n Simple_repeat Simple_repeat 1 30 0 1 1287 571 133 40 0 chr17 92079312 92079412 -3193239 - RMER3D-int LTR ERVK -2259 583 489 1 1287 674 182 16 43 chr17 92079548 92079732 -3192919 - RMER3D-int LTR ERVK -1991 851 673 1 1287 1524 138 33 72 chr17 92079732 92080067 -3192584 + RLTRETN_Mm LTR ERVK 1 322 0 1 1287 4909 86 4 32 chr17 92080068 92080776 -3191875 + ETnERV-int LTR ERVK 2 689 -2625 1 1287 12788 161 26 31 chr17 92080767 92082999 -3189652 + ETnERV2-int LTR ERVK 4619 6839 -567 1 1287 2223 50 30 20 chr17 92082999 92083303 -3189348 + IAPLTR2b LTR ERVK 1 307 -20 1 1287 4658 95 24 31 chr17 92083319 92084037 -3188614 + MMETn-int LTR ERVK 4132 4844 0 1 1287 611 79 0 0 chr17 92084037 92084126 -3188525 + RLTRETN_Mm LTR ERVK 1 89 -233 1 1287 1429 123 18 0 chr17 92084172 92084391 -3188260 - BGLII LTR ERVK 0 421 199 1 1287 264 257 0 90 chr17 92084478 92084589 -3188062 + RLTR22_Mur LTR ERVK 931 1031 -817 1 1287 656 321 101 56 chr17 92084614 92084957 -3187694 + MTD LTR MaLR 53 362 -17 1 1287 198 0 0 0 chr17 92085122 92085144 -3187507 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1287 376 325 89 10 chr17 92085283 92085485 -3187166 - Lx8 LINE L1 -899 6574 6357 1 1287 624 319 156 47 chr17 92085486 92085952 -3186699 - MT2A LTR ERVL 0 601 1 1 1287 231 237 51 0 chr17 92085952 92086011 -3186640 - Lx8 LINE L1 -1113 6360 6299 1 1287 863 287 76 16 chr17 92087502 92087817 -3184834 - Lx9 LINE L1 -310 7334 7001 1 1287 22 35 0 0 chr17 92089336 92089365 -3183286 + AT_rich Low_complexity Low_complexity 1 29 0 1 1287 21 71 0 0 chr17 92089426 92089468 -3183183 + AT_rich Low_complexity Low_complexity 1 42 0 1 1287 227 260 12 83 chr17 92090144 92090228 -3182423 - Charlie5 DNA MER1_type -2538 86 9 1 1287 25 0 0 0 chr17 92090730 92090755 -3181896 + AT_rich Low_complexity Low_complexity 1 25 0 1 1287 684 276 12 0 chr17 92091265 92091435 -3181216 - Lx9 LINE L1 -850 6794 6623 1 1287 8020 212 73 17 chr17 92091967 92094384 -3178267 + L1_Mur1 LINE L1 688 3264 -648 1 1287 3619 137 51 8 chr17 92094391 92095591 -3177060 + L1VL4 LINE L1 552 1815 -2099 1 1287 1241 193 8 11 chr17 92095614 92095913 -3176738 + L1VL4 LINE L1 2072 2359 -3518 1 1287 1527 100 8 0 chr17 92095914 92096154 -3176497 - MusHAL1 LINE L1 -1850 862 621 1 1287 22 0 0 0 chr17 92096480 92096502 -3176149 + AT_rich Low_complexity Low_complexity 1 22 0 1 1287 316 341 0 0 chr17 92096504 92096630 -3176021 + Lx9 LINE L1 7348 7473 -171 1 1287 26 64 0 0 chr17 92096752 92096799 -3175852 + AT_rich Low_complexity Low_complexity 1 47 0 1 1287 605 310 12 69 chr17 92096973 92097085 -3175566 + Lx6 LINE L1 6339 6449 -601 1 1287 219 69 0 0 chr17 92097085 92097114 -3175537 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 1 1287 2399 283 46 22 chr17 92097114 92097794 -3174857 + Lx6 LINE L1 6450 7458 -2 1 1287 23 0 0 0 chr17 92097879 92097902 -3174749 + AT_rich Low_complexity Low_complexity 1 23 0 1 1287 450 0 0 0 chr17 92100034 92100084 -3172567 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 1287 1598 220 41 7 chr17 92100443 92100878 -3171773 + L1_Mur3 LINE L1 4224 4673 -1207 1 1287 3585 75 6 6 chr17 92100878 92101363 -3171288 + L1Md_F2 LINE L1 6096 6580 -2 1 1287 741 259 65 19 chr17 92101374 92101590 -3171061 - MER2 DNA MER2_type -7 338 113 1 1287 333 68 0 0 chr17 92101692 92101736 -3170915 + (GAAA)n Simple_repeat Simple_repeat 3 46 0 1 1287 3553 230 94 30 chr17 92101736 92102433 -3170218 + L1_Mur3 LINE L1 4662 5410 -470 1 1287 5923 110 31 15 chr17 92102433 92103365 -3169286 + Lx3_Mus LINE L1 6062 7008 -1 1 1287 3553 230 94 30 chr17 92103365 92103753 -3168898 + L1_Mur3 LINE L1 5411 5816 -64 1 1287 1607 253 60 78 chr17 92103854 92104483 -3168168 + Lx7 LINE L1 7070 7687 -9 1 1287 756 257 42 11 chr17 92104748 92104937 -3167714 + B3 SINE B2 18 212 -4 1 1287 25 31 0 0 chr17 92105238 92105270 -3167381 + AT_rich Low_complexity Low_complexity 1 32 0 1 1287 9122 111 28 8 chr17 92106630 92109088 -3163563 + Lx3_Mus LINE L1 4506 7009 0 1 1287 230 56 0 27 chr17 92109260 92109297 -3163354 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 1287 538 367 14 33 chr17 92109348 92109539 -3163112 + B4 SINE B4 83 269 -23 1 1287 480 18 0 0 chr17 92109539 92109596 -3163055 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1287 538 367 14 33 chr17 92109596 92109618 -3163033 + B4 SINE B4 270 291 -1 1 1287 183 114 0 0 chr17 92110874 92110909 -3161742 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1287 325 296 13 26 chr17 92111553 92111709 -3160942 - HAL1b LINE L1 -551 1458 1305 1 1287 6143 149 13 11 chr17 92111920 92111986 -3160665 + L1_Mus3 LINE L1 4815 4876 -1007 1 1287 6236 69 24 2 chr17 92111986 92112811 -3159840 - L1Md_F2 LINE L1 0 6582 5740 1 1287 7139 130 9 5 chr17 92112811 92114561 -3158090 + L1_Mus3 LINE L1 4877 6638 0 1 1287 371 294 82 6 chr17 92114646 92114885 -3157766 - L1_Mur3 LINE L1 -664 5636 5331 1 1287 654 126 0 0 chr17 92114979 92115082 -3157569 + (TG)n Simple_repeat Simple_repeat 2 104 0 1 1287 21 0 0 0 chr17 92115535 92115556 -3157095 + AT_rich Low_complexity Low_complexity 1 21 0 1 1287 705 24 0 0 chr17 92116459 92116542 -3156109 + (CA)n Simple_repeat Simple_repeat 2 84 0 1 1287 273 109 0 0 chr17 92117303 92117349 -3155302 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1287 215 241 72 48 chr17 92117688 92117771 -3154880 + L2 LINE L2 2531 2615 -804 1 1287 1244 231 105 0 chr17 92117771 92118084 -3154567 - Lx6 LINE L1 -169 7291 6940 1 1287 5344 206 36 57 chr17 92118078 92119178 -3153473 - L1_Mur3 LINE L1 -2616 3264 2157 1 1287 210 37 0 0 chr17 92119178 92119205 -3153446 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1287 5344 206 36 57 chr17 92119205 92119695 -3152956 - L1_Mur3 LINE L1 -3724 2156 1706 1 1287 334 232 38 92 chr17 92119696 92119881 -3152770 - L1_Mur3 LINE L1 -4344 1536 1362 1 1287 23 33 0 0 chr17 92119950 92119980 -3152671 + AT_rich Low_complexity Low_complexity 1 30 0 1 1287 6676 151 12 20 chr17 92119980 92121164 -3151487 - Lx2A1 LINE L1 -8 7000 5827 1 1287 186 133 0 0 chr17 92121164 92121194 -3151457 + (TTTC)n Simple_repeat Simple_repeat 2 31 0 1 1287 23 0 0 0 chr17 92121208 92121231 -3151420 + AT_rich Low_complexity Low_complexity 1 23 0 1 1287 4321 104 33 11 chr17 92121231 92121892 -3150759 - Lx3_Mus LINE L1 0 7009 6334 1 1287 10645 185 22 46 chr17 92121897 92124337 -3148314 - L1_Mur3 LINE L1 -798 5079 2698 1 1287 38025 40 0 3 chr17 92124359 92130524 -3142127 - L1Md_T LINE L1 0 6585 338 1 1287 7109 164 34 17 chr17 92130510 92132419 -3140232 - L1VL4 LINE L1 -1189 2426 443 1 1287 1410 199 72 16 chr17 92132519 92132892 -3139759 - L1_Mur3 LINE L1 -6476 1252 859 1 1287 811 365 58 21 chr17 92132886 92133578 -3139073 - L1_Mur3 LINE L1 -7048 680 17 1 1287 8173 125 15 24 chr17 92134171 92136359 -3136292 - L1_Mus3 LINE L1 -7 6631 4475 1 1287 393 22 0 0 chr17 92136880 92136926 -3135725 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 1287 192 97 0 0 chr17 92136927 92136958 -3135693 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1287 232 394 57 29 chr17 92136995 92137170 -3135481 - B3A SINE B2 -16 182 3 1 1287 312 305 0 0 chr17 92137195 92137277 -3135374 - ID4_ SINE ID 0 83 2 1 1287 620 350 81 57 chr17 92137331 92137749 -3134902 + MT2A LTR ERVL 1 428 -105 1 1287 795 264 6 0 chr17 92138296 92138463 -3134188 - B3 SINE B2 -44 172 5 1 1287 594 282 71 10 chr17 92138801 92138998 -3133653 + B3 SINE B2 3 211 -5 1 1287 3241 75 45 22 chr17 92139151 92139615 -3133036 + MT2C_Mm LTR ERVL 1 475 0 1 1287 23 54 0 0 chr17 92139801 92139838 -3132813 + AT_rich Low_complexity Low_complexity 1 37 0 1 1287 635 175 34 27 chr17 92139884 92140031 -3132620 + Lx4A LINE L1 6911 7058 0 1 1287 21 36 0 0 chr17 92140031 92140059 -3132592 + AT_rich Low_complexity Low_complexity 1 28 0 1 1287 454 344 46 41 chr17 92141096 92141293 -3131358 - ID_B1 SINE B4 -3 221 24 1 1287 297 109 0 0 chr17 92141678 92141724 -3130927 + (GAAA)n Simple_repeat Simple_repeat 1 46 0 1 1287 573 15 0 0 chr17 92141728 92141794 -3130857 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 1 1287 214 265 0 14 chr17 92142075 92142144 -3130507 + (TATATG)n Simple_repeat Simple_repeat 4 71 0 1 1288 422 289 15 38 chr17 92143875 92144008 -3128643 + RSINE1 SINE B4 3 132 -33 1 1288 339 25 0 0 chr17 92145972 92146012 -3126639 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1288 1912 157 35 3 chr17 92146092 92146431 -3126220 + L1VL4 LINE L1 486 835 -5467 1 1288 2827 160 68 70 chr17 92146434 92147064 -3125587 - RLTR26 LTR ERVK -13 629 1 1 1288 2740 104 12 0 chr17 92147070 92147491 -3125160 + MusHAL1 LINE L1 397 822 -1890 1 1288 2345 112 45 21 chr17 92147472 92147893 -3124758 + MusHAL1 LINE L1 584 1014 -1698 1 1288 4211 97 32 84 chr17 92147893 92148681 -3123970 + RMER17A LTR ERVK 1 747 -4 1 1288 2819 100 7 2 chr17 92148701 92149130 -3123521 + MusHAL1 LINE L1 1005 1435 -1277 1 1288 622 64 121 52 chr17 92149137 92149253 -3123398 - L1Md_F3 LINE L1 -11 6573 6450 1 1288 1650 31 0 0 chr17 92149253 92149446 -3123205 + L1Md_F3 LINE L1 6248 6440 -144 1 1288 418 211 354 0 chr17 92150773 92150934 -3121717 - URR1B DNA MER1_type -3 222 5 1 1288 274 217 152 71 chr17 92151061 92151135 -3121516 + PB1D10 SINE Alu 3 87 -30 1 1288 1972 133 48 6 chr17 92151135 92151467 -3121184 + Lx3_Mus LINE L1 6664 7009 0 1 1288 274 217 152 71 chr17 92151467 92151491 -3121160 + PB1D10 SINE Alu 88 109 -8 1 1288 180 0 0 0 chr17 92151624 92151644 -3121007 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1 1288 946 31 125 0 chr17 92151660 92151788 -3120863 - B1_Mm SINE Alu 0 147 4 2 1288 219 69 0 0 chr17 92152521 92152550 -3120101 + (ATG)n Simple_repeat Simple_repeat 2 30 0 2 1288 475 316 14 36 chr17 92153211 92153349 -3119302 + RSINE1 SINE B4 10 144 -21 2 1288 334 338 18 6 chr17 92153858 92154079 -3118572 + GA-rich Low_complexity Low_complexity 1 223 0 2 1288 4692 130 30 24 chr17 92154357 92155831 -3116820 - L1VL4 LINE L1 -1850 1709 219 2 1288 198 0 0 0 chr17 92156179 92156201 -3116450 + (T)n Simple_repeat Simple_repeat 1 22 0 2 1288 28 29 0 0 chr17 92156655 92156690 -3115961 + AT_rich Low_complexity Low_complexity 1 35 0 2 1288 348 127 0 0 chr17 92157820 92157875 -3114776 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 2 1288 34203 84 34 20 chr17 92158729 92164832 -3107819 - L1Md_F2 LINE L1 -9 6573 326 2 1288 209 33 33 0 chr17 92166699 92166729 -3105922 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 2 1288 1992 243 22 131 chr17 92166889 92167561 -3105090 - RMER19C LTR ERVK -12 599 1 2 1288 203 237 0 0 chr17 92167728 92167766 -3104885 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1288 1677 129 48 0 chr17 92168409 92168680 -3103971 - RMER17B LTR ERVK -674 284 1 2 1288 4013 213 73 19 chr17 92168680 92169693 -3102958 - ORR1A2-int LTR MaLR -894 1069 2 2 1288 1674 108 8 0 chr17 92169694 92169935 -3102716 - ORR1A2 LTR MaLR 0 327 85 2 1288 1613 200 97 53 chr17 92169937 92170370 -3102281 + RMER17B LTR ERVK 1 452 -506 2 1288 5910 73 2 10 chr17 92170389 92171180 -3101471 - L1_Mus1 LINE L1 0 6567 5783 2 1288 2026 44 12 0 chr17 92171178 92171430 -3101221 - L1Md_F2 LINE L1 -12 6570 6316 2 1288 2976 93 0 0 chr17 92171432 92171829 -3100822 - L1_Mm LINE L1 -96 5787 5391 2 1288 189 0 0 0 chr17 92171843 92171864 -3100787 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1288 432 0 0 0 chr17 92171975 92172023 -3100628 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1288 552 119 0 0 chr17 92172030 92172139 -3100512 + (TAGA)n Simple_repeat Simple_repeat 4 112 0 2 1288 552 258 88 140 chr17 92172152 92172517 -3100134 - Lx9 LINE L1 -212 7432 7087 2 1288 247 281 64 115 chr17 92172805 92172962 -3099689 - MTD LTR MaLR -160 259 111 2 1288 1200 240 100 72 chr17 92173216 92173606 -3099045 + MTD LTR MaLR 5 405 -14 2 1288 361 205 18 0 chr17 92175952 92176064 -3096587 + (TA)n Simple_repeat Simple_repeat 1 114 0 2 1288 180 97 0 0 chr17 92176069 92176100 -3096551 + (TATG)n Simple_repeat Simple_repeat 2 32 0 2 1288 352 309 87 0 chr17 92176105 92176231 -3096420 - B1_Mur2 SINE Alu -9 140 4 2 1288 30 0 0 0 chr17 92177449 92177479 -3095172 + AT_rich Low_complexity Low_complexity 1 30 0 2 1288 3248 269 89 18 chr17 92177703 92177829 -3094822 - RMER1A Other Other -15 1015 884 2 1288 441 0 0 0 chr17 92177829 92177878 -3094773 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1288 3248 267 100 18 chr17 92177878 92178699 -3093952 - RMER1A Other Other -147 883 8 2 1288 2342 125 23 42 chr17 92178701 92179319 -3093332 - RMER17A LTR ERVK 0 751 1 2 1288 1369 292 11 31 chr17 92179374 92179756 -3092895 - RMER1B Other Other -605 461 88 2 1288 1954 136 33 156 chr17 92179926 92180406 -3092245 + RLTR23 LTR ERV1 10 430 0 2 1288 445 247 10 0 chr17 92180406 92180502 -3092149 - ORR1B1 LTR MaLR -111 283 187 2 1288 218 116 72 0 chr17 92180566 92180635 -3092016 + T-rich Low_complexity Low_complexity 2 75 0 2 1288 3307 124 27 23 chr17 92180772 92181332 -3091319 + LTRIS2 LTR ERV1 3 564 0 2 1288 231 61 0 0 chr17 92184251 92184284 -3088367 + (TC)n Simple_repeat Simple_repeat 2 34 0 2 1288 354 91 0 0 chr17 92184285 92184340 -3088311 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1288 247 331 109 12 chr17 92184368 92184533 -3088118 + MLT1A1 LTR MaLR 13 193 -215 2 1288 3638 189 183 38 chr17 92185776 92186597 -3086054 + RLTR25A LTR ERVK 1 887 -216 2 1288 459 0 0 0 chr17 92186597 92186648 -3086003 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1288 567 0 0 0 chr17 92186648 92186710 -3085941 + (GA)n Simple_repeat Simple_repeat 2 64 0 2 1288 3638 189 183 38 chr17 92186710 92186841 -3085810 + RLTR25A LTR ERVK 888 1092 -11 2 1288 718 287 9 32 chr17 92187549 92187765 -3084886 + Lx8 LINE L1 6291 6501 -972 2 1288 4609 213 110 26 chr17 92187915 92189470 -3083181 - L1_Mur3 LINE L1 -2707 3173 1489 2 1288 180 0 0 0 chr17 92189470 92189490 -3083161 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1288 6694 136 7 18 chr17 92189492 92190930 -3081721 - L1_Mus4 LINE L1 -17 6619 5194 2 1288 5564 170 21 6 chr17 92190925 92191956 -3080695 + L1_Mur2 LINE L1 4125 5171 -706 2 1288 1418 228 39 5 chr17 92191958 92192337 -3080314 - L1_Mur3 LINE L1 -4384 1496 1097 2 1288 363 23 0 0 chr17 92192337 92192381 -3080270 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1288 378 0 0 0 chr17 92192381 92192422 -3080229 + (GA)n Simple_repeat Simple_repeat 1 42 0 2 1288 1418 231 71 10 chr17 92192422 92192669 -3079982 - L1_Mur3 LINE L1 -6632 1096 836 2 1288 417 289 22 15 chr17 92192683 92192820 -3079831 - L1_Mur3 LINE L1 -7203 525 388 2 1288 400 377 23 14 chr17 92192980 92193198 -3079453 + L1_Mur3 LINE L1 121 340 -7372 2 1288 891 181 0 63 chr17 92193517 92193529 -3079122 - B1_Mur3 SINE Alu 0 149 138 2 1288 1089 103 0 0 chr17 92193529 92193675 -3078976 - B1_Mus1 SINE Alu 0 148 3 2 1288 891 181 0 63 chr17 92193675 92193821 -3078830 - B1_Mur3 SINE Alu -12 137 1 2 1288 206 235 44 0 chr17 92195155 92195223 -3077428 + (TA)n Simple_repeat Simple_repeat 1 71 0 2 1288 23 0 0 0 chr17 92195951 92195974 -3076677 + AT_rich Low_complexity Low_complexity 1 23 0 2 1288 455 286 93 6 chr17 92196563 92196725 -3075926 - Lx5 LINE L1 -247 6803 6628 2 1288 510 288 96 18 chr17 92196731 92196897 -3075754 + Lx5 LINE L1 6797 6975 -75 2 1288 451 365 11 40 chr17 92197014 92197188 -3075463 + ID_B1 SINE B4 8 176 -48 2 1288 292 157 42 28 chr17 92197637 92197709 -3074942 + RMER1C Other Other 995 1067 -275 2 1288 3069 102 11 4 chr17 92197800 92198265 -3074386 - L1_Mur1 LINE L1 -1225 4661 4194 2 1288 511 130 0 0 chr17 92198260 92198337 -3074314 + L1_Mur1 LINE L1 4650 4726 -1160 2 1288 6389 105 43 3 chr17 92198342 92199290 -3073361 + L1_Mur1 LINE L1 4845 5830 -56 2 1288 14191 179 22 99 chr17 92199291 92201102 -3071549 - L1VL4 LINE L1 -1207 4679 2932 2 1288 5086 84 19 3 chr17 92201102 92201804 -3070847 + L1_Mus3 LINE L1 5923 6635 -3 2 1288 14191 179 20 94 chr17 92201804 92203880 -3068771 - L1VL4 LINE L1 -2955 2931 1096 2 1288 188 34 0 33 chr17 92203880 92203910 -3068741 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1288 963 136 0 0 chr17 92203910 92204050 -3068601 - B1_Mus1 SINE Alu -8 140 1 2 1288 4132 174 10 55 chr17 92204050 92204624 -3068027 - L1VL4 LINE L1 -5562 1095 550 2 1288 2273 192 67 46 chr17 92204625 92205396 -3067255 - MYSERV16_I-int LTR ERVK -456 1870 1027 2 1288 237 239 95 32 chr17 92205398 92205493 -3067158 - RMER4A LTR ERVK -58 408 308 2 1288 1137 192 25 61 chr17 92205499 92205777 -3066874 - MYSERV16_I-int LTR ERVK -1418 908 641 2 1288 936 209 6 3 chr17 92205787 92206195 -3066456 - L1_Mur2 LINE L1 -4456 1421 1008 2 1288 5193 158 26 9 chr17 92206205 92207152 -3065499 - Lx2 LINE L1 0 6997 6035 2 1288 242 238 148 16 chr17 92207219 92207347 -3065304 - Lx9 LINE L1 -1 7643 7499 2 1288 180 111 0 0 chr17 92207502 92207529 -3065122 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 1288 414 0 0 0 chr17 92207692 92207738 -3064913 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 1288 4955 102 248 0 chr17 92207928 92208716 -3063935 + RLTR13C1 LTR ERVK 1 983 0 2 1288 1594 238 103 12 chr17 92209445 92209874 -3062777 - RMER1B Other Other -16 1050 583 2 1288 1260 341 64 32 chr17 92209865 92210636 -3062015 - RMER1A Other Other -585 445 1 2 1288 791 264 107 13 chr17 92210749 92210983 -3061668 - RMER1B Other Other -680 386 131 2 1288 351 0 0 0 chr17 92211006 92211045 -3061606 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 1288 1491 249 50 59 chr17 92211208 92211747 -3060904 - RMER19C LTR ERVK -229 673 139 2 1288 387 221 35 0 chr17 92211956 92212042 -3060609 - 4.5SRNA scRNA scRNA 0 94 6 2 1288 1040 243 103 4 chr17 92212072 92212324 -3060327 + RLTR24 LTR ERV1 6 282 -247 2 1288 342 0 0 0 chr17 92212329 92212367 -3060284 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1288 441 0 0 0 chr17 92212367 92212415 -3060236 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 1288 785 103 8 0 chr17 92212625 92212751 -3059900 + (TTTC)n Simple_repeat Simple_repeat 3 129 0 2 1288 461 223 53 23 chr17 92212969 92213102 -3059549 - Lx4B LINE L1 -36 7022 6886 2 1288 326 132 62 62 chr17 92213073 92213154 -3059497 - L1_Mur1 LINE L1 -832 5054 4974 2 1288 315 0 0 0 chr17 92213360 92213396 -3059255 + L1Md_T LINE L1 4179 4214 -1669 2 1288 11765 26 6 1 chr17 92213432 92214830 -3057821 + L1Md_T LINE L1 4183 5586 -297 2 1288 8374 36 1 0 chr17 92214830 92215825 -3056826 + L1Md_T LINE L1 5587 6582 0 2 1288 222 105 0 0 chr17 92215881 92215919 -3056732 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 2 1288 248 242 15 15 chr17 92216140 92216207 -3056444 + RLTR14 LTR ERV1 100 166 -216 2 1288 492 208 53 23 chr17 92216246 92216379 -3056272 - Lx4B LINE L1 -36 7022 6886 2 1288 6443 244 32 100 chr17 92216390 92218233 -3054418 - L1_Mur2 LINE L1 -872 5011 3472 2 1288 189 0 0 0 chr17 92218233 92218254 -3054397 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2 1288 6443 209 31 7 chr17 92218254 92219373 -3053278 - L1_Mur2 LINE L1 -2406 3471 2329 2 1288 572 333 6 0 chr17 92219536 92219710 -3052941 + RLTR14 LTR ERV1 133 307 -75 2 1288 6780 152 32 2 chr17 92219949 92220687 -3051964 + Lx LINE L1 5101 5875 -779 2 1288 450 0 0 0 chr17 92220687 92220737 -3051914 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1288 6780 115 34 4 chr17 92220737 92221498 -3051153 + Lx LINE L1 5876 6642 -12 2 1288 515 208 82 20 chr17 92221507 92221654 -3050997 + RLTR42-int LTR ERVK 1914 2069 -3453 2 1288 365 247 82 120 chr17 92221761 92221945 -3050706 + RLTR42-int LTR ERVK 2861 3037 -3100 2 1288 257 231 15 15 chr17 92222049 92222115 -3050536 + RMER17C-int LTR ERVK 2114 2179 -1059 2 1288 338 273 0 0 chr17 92222275 92222374 -3050277 + RLTR42-int LTR ERVK 3746 3844 -2293 2 1288 22 0 0 0 chr17 92222524 92222546 -3050105 + AT_rich Low_complexity Low_complexity 1 22 0 2 1288 398 266 21 181 chr17 92222556 92222799 -3049852 + RLTR42-int LTR ERVK 4037 4240 -1897 2 1288 606 14 0 0 chr17 92223242 92223313 -3049338 + (TTCC)n Simple_repeat Simple_repeat 3 73 0 2 1288 207 100 0 0 chr17 92223320 92223350 -3049301 + (CTTG)n Simple_repeat Simple_repeat 1 30 0 2 1288 398 326 58 6 chr17 92223400 92223616 -3049035 - L1M3 LINE L1 -1251 4892 4665 2 1288 358 247 0 36 chr17 92224634 92224718 -3047933 - ID2 SINE ID -2 81 1 2 1288 2652 101 7 69 chr17 92224955 92225282 -3047369 - L1Md_F2 LINE L1 -12 6570 6264 2 1288 2531 57 6 178 chr17 92225282 92225748 -3046903 + RLTR10 LTR ERVK 1 386 -4 2 1288 2652 101 7 69 chr17 92225748 92225855 -3046796 - L1Md_F2 LINE L1 -319 6263 6163 2 1288 213 121 0 0 chr17 92225973 92226006 -3046645 + (TATG)n Simple_repeat Simple_repeat 4 36 0 2 1288 3733 153 36 15 chr17 92227951 92228667 -3043984 + RMER17D2 LTR ERVK 79 809 0 2 1288 2892 27 3 0 chr17 92229342 92229678 -3042973 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 1288 55753 18 17 6 chr17 92229678 92236082 -3036569 - IAPEz-int LTR ERVK 0 6481 8 3 1288 2904 24 3 0 chr17 92236082 92236418 -3036233 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 1288 278 67 0 22 chr17 92236972 92237018 -3035633 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 3 1288 1020 117 7 0 chr17 92237018 92237163 -3035488 - B1_Mm SINE Alu 0 147 2 3 1288 480 35 0 0 chr17 92237281 92237339 -3035312 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 1288 3178 163 57 2 chr17 92237629 92238193 -3034458 - L1_Mur1 LINE L1 0 5886 5292 3 1288 869 234 66 0 chr17 92238194 92238421 -3034230 - Lx2A1 LINE L1 0 7008 6767 3 1288 1459 174 7 4 chr17 92238411 92238706 -3033945 - L1_Mur1 LINE L1 -597 5286 4983 3 1288 2804 212 11 2 chr17 92238702 92239275 -3033376 + Lx2B LINE L1 5832 6409 -591 3 1288 213 329 0 0 chr17 92239355 92239431 -3033220 + (TATATG)n Simple_repeat Simple_repeat 6 81 0 3 1288 16458 104 24 12 chr17 92240368 92240524 -3032127 - L1_Mur1 LINE L1 -2012 3874 3732 3 1288 255 31 0 0 chr17 92240524 92240556 -3032095 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 3 1288 1129 45 0 0 chr17 92240556 92240689 -3031962 - B1_Mm SINE Alu -13 134 2 3 1288 16458 109 23 11 chr17 92240689 92243463 -3029188 - L1_Mur1 LINE L1 -2155 3731 911 3 1288 2456 93 9 0 chr17 92243463 92243806 -3028845 + ORR1A1 LTR MaLR 1 346 0 3 1288 3595 152 21 9 chr17 92243806 92244032 -3028619 - L1_Mur1 LINE L1 -6074 910 678 3 1288 2294 108 8 3 chr17 92244021 92244375 -3028276 + L1_Mur1 LINE L1 3911 4266 -1620 3 1288 1022 248 74 13 chr17 92245006 92245304 -3027347 + RMER10A LTR ERVL 30 345 -97 3 1288 693 173 60 0 chr17 92245387 92245520 -3027131 + Lx2B LINE L1 3469 3609 -2271 3 1288 7746 187 34 16 chr17 92245517 92248286 -3024365 + Lx2B LINE L1 4160 7000 0 3 1288 342 0 0 0 chr17 92248712 92248750 -3023901 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1288 432 105 0 0 chr17 92248750 92248826 -3023825 + (GA)n Simple_repeat Simple_repeat 1 76 0 3 1288 201 302 0 0 chr17 92248892 92248945 -3023706 + (TCTCTG)n Simple_repeat Simple_repeat 4 56 0 3 1288 889 302 35 0 chr17 92249089 92249374 -3023277 - Lx9 LINE L1 -213 7431 7137 3 1288 864 287 74 32 chr17 92249812 92250253 -3022398 - RLTR17 LTR ERVK -73 619 111 3 1288 468 0 0 0 chr17 92251019 92251071 -3021580 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 3 1288 255 105 0 0 chr17 92251103 92251141 -3021510 + RMER6D LTR ERVK 1 38 -682 3 1288 1640 220 44 6 chr17 92251152 92251491 -3021160 + RMER6D LTR ERVK 367 718 -2 3 1288 28 48 0 0 chr17 92252853 92252895 -3019756 + AT_rich Low_complexity Low_complexity 1 42 0 3 1288 611 251 206 49 chr17 92254346 92254589 -3018062 + ORR1B1 LTR MaLR 114 394 0 3 1288 437 80 13 0 chr17 92255879 92255954 -3016697 + (TC)n Simple_repeat Simple_repeat 2 77 0 3 1288 204 200 0 0 chr17 92255955 92256010 -3016641 + (TATG)n Simple_repeat Simple_repeat 4 58 0 3 1288 413 333 6 6 chr17 92256386 92256546 -3016105 - Lx9 LINE L1 -734 6910 6751 3 1288 228 237 50 17 chr17 92256547 92256599 -3016052 + ORR1C2 LTR MaLR 1 54 -330 3 1288 1297 229 108 29 chr17 92256599 92257013 -3015638 - RMER16 LTR ERVK 0 533 2 3 1288 6563 147 22 19 chr17 92257036 92257953 -3014698 - RMER16-int LTR ERVK -16 5390 4472 3 1288 195 42 0 0 chr17 92257953 92257977 -3014674 + (CAA)n Simple_repeat Simple_repeat 1 24 0 3 1288 6563 147 22 19 chr17 92257977 92258191 -3014460 - RMER16-int LTR ERVK -935 4471 4256 3 1288 10059 155 43 36 chr17 92258191 92259598 -3013053 + RMER16-int LTR ERVK 742 2165 -3241 3 1288 233 29 29 0 chr17 92259598 92259632 -3013019 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1288 1074 81 0 0 chr17 92259632 92259768 -3012883 - B1_Mus2 SINE Alu -10 137 2 3 1288 10059 132 97 25 chr17 92259768 92260696 -3011955 + RMER16-int LTR ERVK 2166 3153 -2253 3 1288 3439 159 98 15 chr17 92260696 92261380 -3011271 - RMER16-int LTR ERVK -4665 741 1 3 1288 1396 201 75 37 chr17 92261380 92261807 -3010844 - RMER16 LTR ERVK 0 533 1 3 1288 1271 270 49 3 chr17 92261807 92261996 -3010655 + ORR1C2 LTR MaLR 42 245 -139 3 1288 666 68 0 0 chr17 92261996 92262084 -3010567 + (CAG)n Simple_repeat Simple_repeat 2 89 0 3 1288 1271 270 49 3 chr17 92262084 92262221 -3010430 + ORR1C2 LTR MaLR 246 384 0 3 1288 649 332 77 40 chr17 92262243 92262642 -3010009 - Lx9 LINE L1 -912 6732 6175 3 1288 209 167 19 0 chr17 92262642 92262696 -3009955 + (CA)n Simple_repeat Simple_repeat 1 55 0 3 1288 360 300 142 34 chr17 92262719 92262895 -3009756 - B3A SINE B2 -3 195 1 3 1288 491 291 96 34 chr17 92262944 92263459 -3009192 - Lx9 LINE L1 -1671 5973 5395 3 1288 878 28 0 9 chr17 92263462 92263572 -3009079 + (TTC)n Simple_repeat Simple_repeat 3 111 0 3 1288 537 124 0 0 chr17 92263574 92263671 -3008980 + (TCC)n Simple_repeat Simple_repeat 3 99 0 3 1288 3203 261 32 42 chr17 92263791 92265347 -3007304 - Lx7 LINE L1 -913 6783 5247 3 1288 306 0 0 0 chr17 92265737 92265771 -3006880 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1288 405 0 0 0 chr17 92265771 92265815 -3006836 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 1288 4877 210 14 9 chr17 92265973 92266514 -3006137 - Lx4A LINE L1 -3 7055 6507 3 1288 2759 55 3 3 chr17 92266514 92266859 -3005792 - IAPLTR4 LTR ERVK 0 345 1 3 1288 4877 210 14 9 chr17 92266859 92267330 -3005321 - Lx4A LINE L1 -552 6506 6039 3 1288 515 302 38 13 chr17 92269453 92269688 -3002963 + Lx7 LINE L1 7170 7410 -286 3 1288 598 262 42 19 chr17 92270185 92270507 -3002144 - RMER1C Other Other 0 1342 1046 3 1288 881 272 58 52 chr17 92270644 92270935 -3001716 - RMER1C Other Other -298 1044 752 3 1288 1748 263 106 57 chr17 92271098 92271795 -3000856 - RMER19A LTR ERVK 0 737 7 3 1288 448 250 0 0 chr17 92272214 92272302 -3000349 + B1_Mur1 SINE Alu 49 136 -13 3 1288 183 80 0 0 chr17 92272303 92272328 -3000323 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 3 2 649 381 38 11 chr17 92274640 92274903 -2997748 + B4A SINE B4 21 290 -2 3 1289 320 113 0 27 chr17 92275406 92275479 -2997172 + (CAGA)n Simple_repeat Simple_repeat 4 74 0 3 1289 1340 39 6 6 chr17 92275805 92275985 -2996666 + L1Md_F3 LINE L1 6404 6583 -1 3 1289 729 191 6 41 chr17 92275987 92276156 -2996495 + RMER16-int LTR ERVK 5244 5406 0 3 1289 2223 123 15 60 chr17 92276182 92276581 -2996070 + RMER16 LTR ERVK 70 450 -83 3 1289 351 0 0 0 chr17 92276584 92276623 -2996028 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1289 487 336 42 50 chr17 92276897 92277138 -2995513 + RMER15 LTR ERVL 322 560 -15 3 1289 1240 307 47 16 chr17 92277204 92277710 -2994941 + Lx6 LINE L1 6912 7433 -27 3 1289 380 253 23 0 chr17 92278077 92278164 -2994487 - ORR1B2 LTR MaLR -278 89 1 3 1289 352 307 31 56 chr17 92278890 92279052 -2993599 - RLTR17 LTR ERVK -268 424 267 3 1289 614 216 43 18 chr17 92279296 92279539 -2993112 + L1_Mur1 LINE L1 208 412 -6572 3 1289 13247 111 17 5 chr17 92279537 92281654 -2990997 + L1_Mur1 LINE L1 2076 4217 -1669 3 1289 2235 166 64 5 chr17 92281656 92282079 -2990572 - L1_Mm LINE L1 -933 4950 4503 3 1289 3331 125 18 4 chr17 92282079 92282594 -2990057 + L1_Mus4 LINE L1 6108 6629 -7 3 1289 23 92 0 0 chr17 92282596 92282661 -2989990 + AT_rich Low_complexity Low_complexity 1 65 0 3 1289 567 332 29 19 chr17 92283051 92283260 -2989391 + Lx8 LINE L1 7113 7323 -150 3 1289 1022 252 54 54 chr17 92283239 92283335 -2989316 - L1_Rod LINE L1 -206 5641 5534 3 1289 4341 16 0 12 chr17 92283335 92283834 -2988817 - MT2_Mm LTR ERVL 0 493 1 3 1289 1022 257 52 51 chr17 92283834 92284142 -2988509 - L1_Rod LINE L1 -316 5567 5259 3 1289 330 159 8 0 chr17 92284157 92284279 -2988372 + CT-rich Low_complexity Low_complexity 1 122 0 3 1289 773 289 49 42 chr17 92284282 92284712 -2987939 - L1_Rod LINE L1 -602 5245 4813 3 1289 21 0 0 0 chr17 92285225 92285246 -2987405 + AT_rich Low_complexity Low_complexity 1 21 0 3 1289 420 147 0 0 chr17 92285246 92285321 -2987330 + (TG)n Simple_repeat Simple_repeat 2 76 0 3 1289 800 324 22 19 chr17 92286084 92286402 -2986249 - Lx8 LINE L1 -798 6675 6357 3 1289 593 245 124 46 chr17 92286732 92287014 -2985637 - Lx7 LINE L1 -37 7659 7356 3 1289 244 214 23 35 chr17 92287036 92287123 -2985528 + A-rich Low_complexity Low_complexity 5 90 0 3 1289 989 128 0 0 chr17 92287165 92287313 -2985338 - B1_Mus1 SINE Alu 0 148 1 3 1289 6191 102 51 22 chr17 92287313 92288934 -2983717 + L1_Mus2 LINE L1 4923 6556 -10 3 1289 243 0 0 0 chr17 92288934 92288961 -2983690 + (TAA)n Simple_repeat Simple_repeat 1 27 0 3 1289 536 289 78 62 chr17 92288974 92289256 -2983395 + B4A SINE B4 24 292 0 3 1289 483 63 0 0 chr17 92290035 92290098 -2982553 + (TCCC)n Simple_repeat Simple_repeat 3 65 0 3 1289 201 133 0 0 chr17 92290099 92290129 -2982522 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1289 1034 123 7 0 chr17 92290130 92290276 -2982375 + B1_Mus2 SINE Alu 1 147 0 3 1289 366 23 0 0 chr17 92290293 92290336 -2982315 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1289 22 0 0 0 chr17 92291097 92291119 -2981532 + AT_rich Low_complexity Low_complexity 1 22 0 3 1289 702 195 49 82 chr17 92291717 92291901 -2980750 - URR1A DNA MER1_type 0 226 49 3 1289 450 0 0 0 chr17 92292006 92292056 -2980595 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1289 4743 105 5 20 chr17 92292086 92292606 -2980045 + Lx LINE L1 5470 5991 -663 3 1289 265 24 23 23 chr17 92292606 92292649 -2980002 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 1289 1130 49 0 0 chr17 92292651 92292794 -2979857 - B1_Mm SINE Alu -4 143 1 3 1289 4743 90 1 25 chr17 92292794 92293054 -2979597 + Lx LINE L1 5992 6244 -410 3 1289 251 28 0 27 chr17 92293061 92293098 -2979553 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 1289 34 24 0 0 chr17 92294837 92294878 -2977773 + AT_rich Low_complexity Low_complexity 1 41 0 3 1289 612 224 103 0 chr17 92295454 92295610 -2977041 + Lx9 LINE L1 6998 7169 -475 3 1289 4390 146 30 5 chr17 92295614 92296372 -2976279 + Lx3B LINE L1 6089 6865 -108 3 1289 24 53 0 0 chr17 92296413 92296451 -2976200 + AT_rich Low_complexity Low_complexity 1 38 0 3 1289 745 110 16 0 chr17 92296504 92296631 -2976020 + (TA)n Simple_repeat Simple_repeat 1 129 0 3 1289 1383 233 89 14 chr17 92296671 92297097 -2975554 + Lx9 LINE L1 7187 7644 0 3 1289 26 0 0 0 chr17 92297143 92297169 -2975482 + AT_rich Low_complexity Low_complexity 1 26 0 3 1289 304 252 26 26 chr17 92298014 92298128 -2974523 + (CAT)n Simple_repeat Simple_repeat 3 116 0 3 1289 21 57 0 0 chr17 92298664 92298699 -2973952 + AT_rich Low_complexity Low_complexity 1 35 0 3 1289 22 56 0 0 chr17 92299386 92299422 -2973229 + AT_rich Low_complexity Low_complexity 1 36 0 3 1289 1128 94 6 12 chr17 92299524 92299696 -2972955 + L1_Mus1 LINE L1 6396 6566 -1 3 1289 333 300 33 0 chr17 92299959 92300079 -2972572 + ORR1C2 LTR MaLR 1 124 -260 3 1289 27 0 0 0 chr17 92300938 92300965 -2971686 + AT_rich Low_complexity Low_complexity 1 27 0 3 1289 3169 40 30 2 chr17 92301280 92301677 -2970974 - L1Md_F2 LINE L1 0 6582 6175 3 1289 298 136 90 15 chr17 92301679 92301746 -2970905 - RMER17B LTR ERVK -511 447 376 3 1289 287 317 110 5 chr17 92302125 92302344 -2970307 - Lx9 LINE L1 -156 7488 7247 4 1289 30 59 0 0 chr17 92302457 92302508 -2970143 + AT_rich Low_complexity Low_complexity 1 51 0 4 1289 1398 311 96 27 chr17 92302519 92303228 -2969423 - Lx8 LINE L1 -55 7418 6661 4 1289 21 36 0 0 chr17 92305373 92305401 -2967250 + AT_rich Low_complexity Low_complexity 1 28 0 4 1289 21 0 0 0 chr17 92305543 92305564 -2967087 + AT_rich Low_complexity Low_complexity 1 21 0 4 1289 5090 46 0 6 chr17 92306285 92306918 -2965733 - L1Md_F2 LINE L1 -1 6581 5953 4 1289 22 35 0 0 chr17 92306953 92306982 -2965669 + AT_rich Low_complexity Low_complexity 1 29 0 4 1289 25 31 0 0 chr17 92307283 92307315 -2965336 + AT_rich Low_complexity Low_complexity 1 32 0 4 1289 3143 184 55 49 chr17 92307553 92308241 -2964410 + RLTR17 LTR ERVK 1 692 0 4 1289 688 294 71 97 chr17 92308573 92308953 -2963698 - ORR1D2 LTR MaLR 0 370 1 4 1289 25 65 0 0 chr17 92309398 92309444 -2963207 + AT_rich Low_complexity Low_complexity 1 46 0 4 1289 3789 88 13 14 chr17 92310170 92310721 -2961930 + L1Md_F2 LINE L1 6018 6567 -15 4 1289 211 224 0 0 chr17 92311189 92311238 -2961413 + (TATATG)n Simple_repeat Simple_repeat 3 51 0 4 1289 231 61 0 0 chr17 92311243 92311276 -2961375 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 1289 1175 102 40 0 chr17 92312973 92313150 -2959501 - B2_Mm2 SINE B2 -5 190 7 4 1289 26 50 0 0 chr17 92313622 92313662 -2958989 + AT_rich Low_complexity Low_complexity 1 40 0 4 1289 22 0 0 0 chr17 92314600 92314622 -2958029 + AT_rich Low_complexity Low_complexity 1 22 0 4 1289 312 302 68 8 chr17 92315063 92315180 -2957471 - L1M5 LINE L1 -2947 3199 3076 4 1289 21 0 0 0 chr17 92315324 92315345 -2957306 + AT_rich Low_complexity Low_complexity 1 21 0 4 1289 2588 92 23 16 chr17 92315636 92316022 -2956629 - L1_Mus3 LINE L1 -1 6637 6249 4 1289 4348 122 50 48 chr17 92316025 92317301 -2955350 - L1VL1 LINE L1 -2206 1492 211 4 1289 1163 55 7 0 chr17 92317354 92317500 -2955151 + B1_Mm SINE Alu 1 147 0 4 1289 21 36 0 0 chr17 92318107 92318135 -2954516 + AT_rich Low_complexity Low_complexity 1 28 0 4 1289 360 0 0 0 chr17 92318422 92318462 -2954189 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1289 24 0 0 0 chr17 92318541 92318565 -2954086 + AT_rich Low_complexity Low_complexity 1 24 0 4 1289 1015 267 27 15 chr17 92318587 92318925 -2953726 - L1VL2 LINE L1 -5928 407 66 4 1289 2306 228 29 27 chr17 92319073 92319627 -2953024 - Lx2B LINE L1 -2 6998 6444 4 1289 1130 256 22 22 chr17 92319634 92319909 -2952742 - RMER13A LTR ERVK -21 839 565 4 1289 1550 232 36 36 chr17 92319918 92320360 -2952291 - Lx2B LINE L1 -567 6433 5992 4 1289 1743 163 49 0 chr17 92320365 92320690 -2951961 + L1_Mur1 LINE L1 5504 5844 -42 4 1289 12419 128 27 8 chr17 92320694 92323590 -2949061 + L1VL2 LINE L1 96 3052 -563 4 1289 22611 158 15 17 chr17 92323596 92327110 -2945541 + L1_Mus3 LINE L1 1727 5245 -638 4 1289 4551 47 0 4 chr17 92327110 92327666 -2944985 + L1Md_F2 LINE L1 6014 6567 -15 4 1289 22611 121 59 8 chr17 92327666 92328995 -2943656 + L1_Mus3 LINE L1 5246 6629 -9 4 1289 5496 212 53 68 chr17 92329008 92329796 -2942855 + Lx LINE L1 4336 5086 -797 4 1289 5663 76 0 16 chr17 92329796 92330555 -2942096 + L1Md_F2 LINE L1 5832 6578 -4 4 1289 5937 176 38 42 chr17 92330555 92331662 -2940989 + Lx LINE L1 5087 6220 -434 4 1289 2052 158 58 25 chr17 92331662 92332058 -2940593 + RLTR9E LTR ERVK 1 409 0 4 1289 5937 148 26 22 chr17 92332058 92332499 -2940152 + Lx LINE L1 6221 6654 0 4 1289 683 192 0 30 chr17 92332518 92332652 -2939999 + Lx2B LINE L1 5832 5961 -1039 4 1289 4724 121 53 13 chr17 92332673 92333434 -2939217 - Lx3_Mus LINE L1 0 7009 6219 4 1289 483 87 0 0 chr17 92334037 92334106 -2938545 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 4 1289 489 254 123 21 chr17 92334117 92334350 -2938301 - Lx8 LINE L1 -1555 5918 5621 4 1289 1117 253 0 0 chr17 92334397 92334630 -2938021 + Lx2A1 LINE L1 6113 6345 -663 4 1289 5177 62 0 6 chr17 92337092 92337761 -2934890 - L1Md_F2 LINE L1 -2 6580 5916 4 1289 316 285 9 6 chr17 92338183 92338316 -2934335 + L1VL1 LINE L1 4 83 -6339 4 1289 28654 131 18 12 chr17 92338325 92344372 -2928279 + L1_Mus3 LINE L1 546 6638 0 4 1289 3183 198 25 119 chr17 92345461 92346110 -2926541 + Lx2 LINE L1 550 1098 -5559 4 1289 255 61 0 0 chr17 92346110 92346143 -2926508 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 4 1289 17196 196 28 119 chr17 92346143 92346711 -2925940 + Lx2 LINE L1 1099 1684 -4202 4 1289 789 31 0 0 chr17 92346711 92346807 -2925844 + (GA)n Simple_repeat Simple_repeat 1 96 0 4 1289 17196 196 28 118 chr17 92346807 92350328 -2922323 + Lx2 LINE L1 1685 4742 -1144 4 1289 2946 44 6 0 chr17 92350328 92350694 -2921957 + L1Md_F2 LINE L1 6215 6582 0 4 1289 17196 177 24 48 chr17 92350694 92352942 -2919709 + Lx2 LINE L1 4743 6996 -1 4 1289 216 0 0 0 chr17 92353789 92353813 -2918838 + (TTG)n Simple_repeat Simple_repeat 2 25 0 4 1289 26 64 0 0 chr17 92354298 92354345 -2918306 + AT_rich Low_complexity Low_complexity 1 47 0 4 1289 950 75 82 0 chr17 92354951 92355085 -2917566 - B1_Mm SINE Alu 0 147 3 4 1289 14823 53 3 1 chr17 92355789 92357661 -2914990 + L1Md_F3 LINE L1 3710 5586 -297 4 1289 7909 44 10 6 chr17 92357661 92358655 -2913996 + L1Md_F3 LINE L1 5587 6584 0 4 1289 459 355 79 50 chr17 92358717 92359034 -2913617 + MTE-int LTR MaLR 1196 1521 -59 4 1289 496 290 85 4 chr17 92359463 92359733 -2912918 + L1MA4 LINE L1 5557 5848 -452 4 1289 1130 178 4 45 chr17 92360916 92361158 -2911493 - Lx2 LINE L1 -1 6996 6765 4 1289 5127 143 9 2 chr17 92361148 92361994 -2910657 - Lx2 LINE L1 -353 6644 5793 4 1289 351 263 0 0 chr17 92361998 92362074 -2910577 - B3 SINE B2 -139 77 2 4 1289 240 333 16 58 chr17 92362235 92362356 -2910295 + PB1D10 SINE Alu 1 116 -1 4 1289 237 307 201 49 chr17 92362386 92362530 -2910121 + B4 SINE B4 13 178 -114 4 1289 505 279 96 79 chr17 92362853 92363156 -2909495 - Lx8 LINE L1 -8 7465 7158 4 1289 414 57 0 0 chr17 92363156 92363209 -2909442 + (TTTA)n Simple_repeat Simple_repeat 4 56 0 4 1289 3708 201 57 4 chr17 92363213 92363956 -2908695 - Lx4A LINE L1 -1 7057 6276 4 1289 994 184 20 39 chr17 92363975 92364230 -2908421 + RMER3D-int LTR ERVK 2593 2842 0 4 1289 3262 161 9 12 chr17 92364230 92364795 -2907856 + RLTR17 LTR ERVK 1 563 -129 4 1289 479 17 0 16 chr17 92365067 92365128 -2907523 + (TA)n Simple_repeat Simple_repeat 2 61 0 4 1289 1144 284 81 9 chr17 92365216 92365636 -2907015 - Lx9 LINE L1 -8 7636 7187 4 1289 516 195 25 33 chr17 92365639 92365761 -2906890 - ORR1C2 LTR MaLR 0 384 264 4 1289 3101 233 75 22 chr17 92365769 92366121 -2906530 + Lx6 LINE L1 4919 5325 -555 4 1289 459 0 0 0 chr17 92366121 92366172 -2906479 + (GAAA)n Simple_repeat Simple_repeat 4 54 0 4 1289 3101 238 62 23 chr17 92366172 92366855 -2905796 + Lx6 LINE L1 5326 6003 -1457 4 1289 2147 271 106 30 chr17 92366866 92367558 -2905093 + Lx6 LINE L1 6717 7460 0 4 1289 469 230 0 11 chr17 92367754 92367859 -2904792 - ORR1C1 LTR MaLR -10 384 266 4 1289 300 264 14 0 chr17 92367859 92367931 -2904720 - ORR1C1 LTR MaLR -311 73 1 4 1289 26 30 0 0 chr17 92368113 92368146 -2904505 + AT_rich Low_complexity Low_complexity 1 33 0 4 1289 21 36 0 0 chr17 92368790 92368818 -2903833 + AT_rich Low_complexity Low_complexity 1 28 0 4 1289 1078 252 41 19 chr17 92369330 92369649 -2903002 + MYSERV-int LTR ERVK 3828 4153 -2397 4 1289 5698 69 18 3 chr17 92369655 92370396 -2902255 - L1_Mus1 LINE L1 -1 6566 5815 4 1289 2070 298 66 23 chr17 92370413 92371289 -2901362 + MYSERV-int LTR ERVK 4249 5126 -1424 4 1289 433 315 64 32 chr17 92371292 92371479 -2901172 + RMER4A LTR ERVK 254 446 -20 4 1289 3704 235 110 18 chr17 92371480 92372607 -2900044 + MYSERV-int LTR ERVK 5318 6548 -2 4 1289 811 265 39 39 chr17 92372611 92372945 -2899706 + RLTR15 LTR ERVK 8 341 -18 4 1289 312 340 20 20 chr17 92372984 92373086 -2899565 + MER21B LTR ERV1 193 294 -569 4 1289 1225 41 0 0 chr17 92373114 92373260 -2899391 - B1_Mus2 SINE Alu 0 147 2 4 1289 760 182 15 0 chr17 92373599 92373731 -2898920 + B1_Mus1 SINE Alu 2 135 -13 4 1289 495 0 0 0 chr17 92373731 92373786 -2898865 + (CAAAA)n Simple_repeat Simple_repeat 1 55 0 4 1289 3580 121 9 2 chr17 92374285 92374840 -2897811 + L1_Mus4 LINE L1 6076 6634 -2 4 1289 247 276 161 0 chr17 92375800 92375887 -2896764 - MLT1A1 LTR MaLR -25 383 283 4 1289 185 321 72 24 chr17 92376026 92376109 -2896542 - L3 LINE CR1 -2790 1699 1613 4 1289 21 57 0 0 chr17 92376301 92376336 -2896315 + AT_rich Low_complexity Low_complexity 1 35 0 4 1289 182 167 47 23 chr17 92377033 92377076 -2895575 + L3 LINE CR1 2686 2729 -1760 4 1289 31 44 0 0 chr17 92377732 92377777 -2894874 + AT_rich Low_complexity Low_complexity 1 45 0 4 1289 317 278 21 0 chr17 92379265 92379362 -2893289 + B1_Mus1 SINE Alu 2 100 -48 4 1289 181 417 73 11 chr17 92379982 92380159 -2892492 - L2 LINE L2 -537 2882 2695 4 1289 1063 172 0 11 chr17 92380501 92380689 -2891962 - L1_Mur2 LINE L1 -1296 4581 4396 4 1289 365 279 126 0 chr17 92381182 92381372 -2891279 - Lx9 LINE L1 0 7644 7431 4 1289 1471 266 118 14 chr17 92381368 92381985 -2890666 - Lx9 LINE L1 -352 7292 6612 4 1289 360 103 0 0 chr17 92382123 92382181 -2890470 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 1289 358 350 49 30 chr17 92382395 92382598 -2890053 - MTEa LTR MaLR 0 379 173 4 1289 26 88 0 0 chr17 92382818 92382886 -2889765 + AT_rich Low_complexity Low_complexity 1 68 0 4 1289 29 47 0 0 chr17 92383746 92383789 -2888862 + AT_rich Low_complexity Low_complexity 1 43 0 4 1289 21 36 0 0 chr17 92383841 92383869 -2888782 + AT_rich Low_complexity Low_complexity 1 28 0 4 1289 475 221 38 94 chr17 92384485 92384645 -2888006 + MT2B LTR ERVL 107 257 -344 4 1289 1021 85 0 0 chr17 92384548 92384680 -2887971 + B1_Mus2 SINE Alu 6 137 -10 4 1289 359 21 0 20 chr17 92384680 92384729 -2887922 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 4 1289 4231 69 7 2 chr17 92384899 92385447 -2887204 + L1_Mus2 LINE L1 6016 6566 0 4 1289 284 331 93 40 chr17 92385495 92385646 -2887005 + B4A SINE B4 134 292 0 4 1289 230 354 30 30 chr17 92386026 92386157 -2886494 + B1F SINE Alu 17 147 -2 4 1289 21 71 0 0 chr17 92386428 92386470 -2886181 + AT_rich Low_complexity Low_complexity 1 42 0 4 1289 343 183 164 22 chr17 92386596 92386730 -2885921 - Lx9 LINE L1 -2 7642 7490 4 1289 276 100 0 0 chr17 92386730 92386770 -2885881 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1289 386 222 217 0 chr17 92386776 92386956 -2885695 - Lx9 LINE L1 -32 7612 7394 5 1289 2654 208 67 11 chr17 92387536 92388106 -2884545 + Lx4A LINE L1 6457 7058 0 5 1289 292 380 6 0 chr17 92388196 92388354 -2884297 - L1M4 LINE L1 -544 5640 5482 5 1289 232 322 56 0 chr17 92388583 92388673 -2883978 + MLT1A1 LTR MaLR 273 367 -41 5 1289 231 384 62 0 chr17 92389196 92389308 -2883343 - B1F1 SINE Alu -6 143 25 5 1289 1145 282 62 23 chr17 92389693 92390179 -2882472 + RLTR16 LTR ERVK 1 505 0 5 1289 32 101 0 0 chr17 92390197 92390306 -2882345 + AT_rich Low_complexity Low_complexity 1 109 0 5 1289 2701 227 39 27 chr17 92390782 92391451 -2881200 + Lx6 LINE L1 6495 7171 -289 5 1289 480 183 0 9 chr17 92391454 92391559 -2881092 + Lx2 LINE L1 6894 6997 0 5 1289 228 274 136 8 chr17 92391586 92391672 -2880979 + Lx6 LINE L1 7159 7260 -200 5 1289 243 0 0 0 chr17 92391672 92391699 -2880952 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1289 228 274 136 8 chr17 92391699 92391730 -2880921 + Lx6 LINE L1 7261 7290 -170 5 1289 438 36 0 0 chr17 92391917 92391973 -2880678 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1289 183 100 0 0 chr17 92392044 92392074 -2880577 + (T)n Simple_repeat Simple_repeat 1 30 0 5 1289 25 0 0 0 chr17 92392145 92392170 -2880481 + AT_rich Low_complexity Low_complexity 1 25 0 5 1289 879 230 200 0 chr17 92392344 92392609 -2880042 + L1_Mur3 LINE L1 5341 5658 -222 5 1289 974 244 83 60 chr17 92392611 92392947 -2879704 + Lx6 LINE L1 6507 6850 -610 5 1289 494 198 25 17 chr17 92392952 92393070 -2879581 - B2_Mm2 SINE B2 -71 124 6 5 1289 715 312 62 101 chr17 92393072 92393188 -2879463 + Lx6 LINE L1 6881 7012 -448 5 1289 1352 58 0 0 chr17 92393188 92393361 -2879290 + L1_Mus1 LINE L1 6395 6567 0 5 1289 715 312 62 101 chr17 92393361 92393600 -2879051 + Lx6 LINE L1 7013 7222 -238 5 1289 216 62 0 0 chr17 92394143 92394153 -2878498 + (A)n Simple_repeat Simple_repeat 1 10 0 5 1289 1126 82 0 0 chr17 92394153 92394300 -2878351 + B1_Mm SINE Alu 1 147 0 5 1289 216 62 0 0 chr17 92394300 92394321 -2878330 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1289 464 250 167 42 chr17 92394539 92394731 -2877920 - B3 SINE B2 0 216 1 5 1289 2228 67 13 0 chr17 92395942 92396242 -2876409 - RLTR22_Mus LTR ERVK -1148 660 357 5 1289 5728 43 0 1 chr17 92396253 92397037 -2875614 - L1Md_F2 LINE L1 -637 5945 5164 5 1289 3478 112 4 0 chr17 92397035 92397552 -2875099 + L1_Mm LINE L1 3338 3856 -2027 5 1289 277 159 0 0 chr17 92397546 92397590 -2875061 + L1_Mur2 LINE L1 5099 5142 -735 5 1289 2590 95 8 0 chr17 92397590 92397958 -2874693 - RLTR22_Mus LTR ERVK -1437 371 1 5 1289 382 240 0 19 chr17 92398089 92398246 -2874405 + CT-rich Low_complexity Low_complexity 3 156 0 5 1289 344 321 22 0 chr17 92398957 92399094 -2873557 - L1_Mur3 LINE L1 -6700 1012 873 5 1289 1706 59 5 0 chr17 92399664 92399884 -2872767 + L1Md_F2 LINE L1 6350 6570 -12 5 1289 200 217 0 0 chr17 92399897 92399943 -2872708 + A-rich Low_complexity Low_complexity 1 46 0 5 1289 6333 153 31 8 chr17 92401319 92402921 -2869730 - Lx LINE L1 -11 6643 4996 5 161 32284 115 15 17 chr17 92402930 92409300 -2863351 - L1Md_F2 LINE L1 -10 6572 217 5 1290 434 156 0 0 chr17 92409301 92409378 -2863273 - Lx LINE L1 -858 5028 4952 5 1290 431 141 0 0 chr17 92409379 92409450 -2863201 + L1_Mur2 LINE L1 3965 4035 -1842 5 1290 326 304 46 52 chr17 92409493 92409646 -2863005 + L1M4c LINE L1 806 957 -5427 5 1290 315 182 0 0 chr17 92409681 92409758 -2862893 + (CCA)n Simple_repeat Simple_repeat 1 77 0 5 1290 300 312 24 121 chr17 92409765 92409889 -2862762 + B1F1 SINE Alu 2 113 -36 5 1290 314 326 47 0 chr17 92410007 92410136 -2862515 + L1M4c LINE L1 1061 1195 -5189 5 1290 264 244 171 40 chr17 92410574 92410749 -2861902 - Lx8 LINE L1 -6 7467 7270 5 1290 231 226 10 106 chr17 92411213 92411317 -2861334 + L1M4c LINE L1 2165 2258 -4126 5 1290 492 327 49 25 chr17 92411536 92411740 -2860911 + B3 SINE B2 2 210 -6 5 1290 216 135 0 0 chr17 92412088 92412125 -2860526 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 1290 25 51 0 0 chr17 92412128 92412167 -2860484 + AT_rich Low_complexity Low_complexity 1 39 0 5 1290 1864 99 31 22 chr17 92412994 92413313 -2859338 + RLTRETN_Mm LTR ERVK 1 322 0 5 1290 289 306 59 57 chr17 92413682 92413824 -2858827 - Lx6 LINE L1 -201 6849 6718 5 1290 279 0 0 0 chr17 92413824 92413855 -2858796 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 1290 763 231 85 0 chr17 92413861 92414099 -2858552 - Lx6 LINE L1 -574 6886 6455 5 1290 1086 109 0 0 chr17 92414906 92415053 -2857598 + B1_Mus2 SINE Alu 1 147 0 5 1290 27 62 0 0 chr17 92415609 92415657 -2856994 + AT_rich Low_complexity Low_complexity 1 48 0 5 1290 294 172 70 0 chr17 92415732 92415860 -2856791 + (TA)n Simple_repeat Simple_repeat 1 137 0 5 1290 2765 224 42 8 chr17 92415865 92416685 -2855966 - RMER13B LTR ERVK -12 896 3 5 1290 846 308 129 10 chr17 92416693 92417103 -2855548 - Lx9 LINE L1 -132 7512 7054 5 1290 304 340 10 10 chr17 92417106 92417204 -2855447 + Lx9 LINE L1 5874 5971 -1673 5 1290 1898 291 97 12 chr17 92417409 92418080 -2854571 + Lx9 LINE L1 6307 7034 -610 5 1290 3506 80 0 0 chr17 92418548 92419010 -2853641 - L1_Mus1 LINE L1 0 6567 6106 5 1290 1797 201 15 3 chr17 92419242 92419581 -2853070 + Lx4A LINE L1 6713 7055 -3 5 1290 21 0 0 0 chr17 92419581 92419602 -2853049 + AT_rich Low_complexity Low_complexity 1 21 0 5 1290 365 101 11 43 chr17 92420070 92420137 -2852514 + T-rich Low_complexity Low_complexity 28 94 0 5 1290 1207 41 0 0 chr17 92420137 92420284 -2852367 - B1_Mm SINE Alu 0 147 1 5 1290 365 101 11 43 chr17 92420284 92420309 -2852342 + T-rich Low_complexity Low_complexity 5 27 0 5 1290 480 77 0 0 chr17 92420358 92420423 -2852228 + (TC)n Simple_repeat Simple_repeat 2 66 0 5 1290 10057 108 62 17 chr17 92420660 92421530 -2851121 - L1VL2 LINE L1 -901 2714 1770 5 1290 207 0 0 0 chr17 92421530 92421553 -2851098 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 1290 10057 114 52 11 chr17 92421553 92423108 -2849543 - L1VL2 LINE L1 -1846 1769 177 5 1290 519 369 23 37 chr17 92423108 92423541 -2849110 - Lx7 LINE L1 -619 7077 6651 5 1290 292 278 131 20 chr17 92423542 92423641 -2849010 - RMER20B LTR ERVK -25 602 493 5 1290 2606 88 16 3 chr17 92423701 92424090 -2848561 - L1_Mus1 LINE L1 0 6567 6194 5 1290 2607 106 0 5 chr17 92424090 92424469 -2848182 - L1_Mm LINE L1 -286 5597 5221 5 1290 416 279 196 10 chr17 92424657 92424856 -2847795 - RMER20B LTR ERVK -144 483 248 5 1290 386 294 108 49 chr17 92425105 92425309 -2847342 - B3 SINE B2 0 216 1 5 1290 553 291 7 7 chr17 92425429 92425578 -2847073 - B1_Mur2 SINE Alu 0 149 1 5 1290 362 297 27 32 chr17 92425782 92425970 -2846681 - L1M3 LINE L1 -346 5822 5636 5 1290 868 305 81 3 chr17 92425965 92426310 -2846341 + Lx7 LINE L1 6991 7362 -334 5 1290 862 209 77 9 chr17 92426325 92426547 -2846104 + Lx7 LINE L1 7435 7671 -25 5 1290 357 214 0 0 chr17 92427353 92427456 -2845195 + (CA)n Simple_repeat Simple_repeat 2 104 0 5 1290 390 125 0 0 chr17 92427714 92427794 -2844857 + (A)n Simple_repeat Simple_repeat 1 80 0 5 1290 21 36 0 0 chr17 92428855 92428883 -2843768 + AT_rich Low_complexity Low_complexity 1 28 0 5 1290 21 0 0 0 chr17 92429672 92429693 -2842958 + AT_rich Low_complexity Low_complexity 1 21 0 5 1290 411 293 0 42 chr17 92430128 92430275 -2842376 - B1_Mur1 SINE Alu 0 150 11 5 1290 26 0 0 0 chr17 92431299 92431325 -2841326 + AT_rich Low_complexity Low_complexity 1 26 0 5 1290 21 0 0 0 chr17 92431487 92431508 -2841143 + AT_rich Low_complexity Low_complexity 1 21 0 5 1290 1774 160 15 39 chr17 92432859 92432913 -2839738 - ORR1A3 LTR MaLR 0 326 285 5 1290 670 192 129 23 chr17 92432913 92433084 -2839567 - B2_Mm2 SINE B2 -6 189 1 5 1290 1774 160 15 39 chr17 92433084 92433361 -2839290 - ORR1A3 LTR MaLR -42 284 3 5 1290 503 287 54 43 chr17 92433739 92434077 -2838574 - L1_Rod LINE L1 -85 5762 5437 5 1290 2386 268 54 34 chr17 92434271 92435070 -2837581 - Lx5 LINE L1 -68 6982 6168 5 1290 3317 186 29 14 chr17 92435067 92435755 -2836896 + L1_Mur2 LINE L1 4821 5518 -359 5 1290 322 74 37 0 chr17 92435775 92435829 -2836822 + (TTTC)n Simple_repeat Simple_repeat 3 58 0 5 1290 4206 119 46 1 chr17 92435831 92436503 -2836148 - L1_Mus3 LINE L1 -3 6635 5934 5 1290 570 310 48 38 chr17 92437265 92437580 -2835071 - RLTR15 LTR ERVK -16 343 26 5 1290 2999 55 10 0 chr17 92437745 92438128 -2834523 - RLTR10 LTR ERVK -3 387 1 5 1290 8412 38 0 2 chr17 92438128 92439125 -2833526 - RLTR10-int LTR ERVK -3 1984 990 5 1290 5045 67 133 113 chr17 92439655 92440587 -2832064 - RLTR10-int LTR ERVK -995 992 42 5 1290 2812 60 52 0 chr17 92440599 92440968 -2831683 - RLTR10 LTR ERVK -2 388 1 5 1290 259 340 0 45 chr17 92440968 92441079 -2831572 - PB1D9 SINE Alu -12 108 3 5 1290 279 114 0 0 chr17 92441453 92441497 -2831154 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 5 1290 11918 141 63 8 chr17 92442386 92445051 -2827600 + L1VL4 LINE L1 410 3221 -338 5 1290 229 150 32 32 chr17 92445092 92445103 -2827548 + (TA)n Simple_repeat Simple_repeat 1 11 0 5 1290 456 19 0 0 chr17 92445103 92445156 -2827495 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1290 229 150 32 32 chr17 92445156 92445206 -2827445 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 1290 180 0 0 0 chr17 92445583 92445603 -2827048 + (TCTTG)n Simple_repeat Simple_repeat 2 21 0 5 1290 309 318 13 19 chr17 92446034 92446188 -2826463 - L1M2 LINE L1 -1270 4873 4721 5 1290 2236 238 8 25 chr17 92446190 92446711 -2825940 + Lx4B LINE L1 6542 7053 -5 5 1290 1416 307 28 13 chr17 92447325 92447797 -2824854 - RLTR16 LTR ERVK -26 479 1 5 1290 657 264 55 32 chr17 92447925 92448144 -2824507 - LTRIS4 LTR ERV1 0 507 284 5 1290 21282 155 51 40 chr17 92448724 92451446 -2821205 - Lx3C LINE L1 -2 6974 4454 5 1290 666 141 21 21 chr17 92451446 92451591 -2821060 - L1_Mus3 LINE L1 0 6638 6494 5 1290 21282 172 35 58 chr17 92451591 92455176 -2817475 - Lx3C LINE L1 -1433 4453 742 5 1290 1244 234 80 3 chr17 92455281 92455620 -2817031 + MYSERV16_I-int LTR ERVK 1477 1841 -485 5 1290 1160 204 57 8 chr17 92455631 92455996 -2816655 + MYSERV16_I-int LTR ERVK 1915 2196 -130 5 1290 1537 258 53 48 chr17 92456000 92456664 -2815987 + BGLII_B LTR ERVK 19 528 -33 5 1290 304 253 10 69 chr17 92456690 92456792 -2815859 - Lx3C LINE L1 -6225 759 664 5 1290 522 15 0 0 chr17 92456794 92456860 -2815791 + L1Md_T LINE L1 6517 6582 0 5 1290 23 54 0 0 chr17 92456885 92456922 -2815729 + AT_rich Low_complexity Low_complexity 1 37 0 5 1290 2869 201 8 30 chr17 92457850 92459018 -2813633 + L1_Mus2 LINE L1 260 1323 -5311 5 1290 7736 101 11 1 chr17 92459028 92460818 -2811833 + L1_Mus2 LINE L1 4757 6566 0 5 1290 21 57 0 0 chr17 92461248 92461283 -2811368 + AT_rich Low_complexity Low_complexity 1 35 0 5 1290 367 348 5 51 chr17 92461623 92461838 -2810813 - B3 SINE B2 -11 205 1 6 1290 350 314 100 75 chr17 92462211 92462411 -2810240 - B4 SINE B4 -87 205 1 6 1290 41 21 0 0 chr17 92463945 92463993 -2808658 + AT_rich Low_complexity Low_complexity 1 48 0 6 1290 2454 162 11 5 chr17 92464395 92464834 -2807817 + L1_Mur1 LINE L1 5159 5600 -286 6 1290 1216 161 7 16 chr17 92464877 92465142 -2807509 - RLTR31_Mur LTR ERVK -79 482 241 6 1290 512 185 151 24 chr17 92465147 92465313 -2807338 + Lx3C LINE L1 6789 6975 -1 6 1290 345 299 0 22 chr17 92465461 92465550 -2807101 + B1_Mur4 SINE Alu 12 98 -52 6 1290 2884 61 199 12 chr17 92466383 92466814 -2805837 - RLTR1B LTR ERV1 0 512 1 6 1290 186 43 0 0 chr17 92466858 92466881 -2805770 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 6 1290 472 322 7 20 chr17 92466890 92467039 -2805612 - B3A SINE B2 -49 149 3 6 1290 375 41 0 0 chr17 92467083 92467132 -2805519 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1290 324 70 0 0 chr17 92467132 92467174 -2805477 + (TA)n Simple_repeat Simple_repeat 1 43 0 6 1290 438 20 0 0 chr17 92467174 92467224 -2805427 + (GA)n Simple_repeat Simple_repeat 2 52 0 6 1290 1459 265 32 79 chr17 92467336 92467558 -2805093 - RMER19C LTR ERVK 0 611 400 6 1290 1897 48 0 71 chr17 92467558 92467827 -2804824 + L1_Mus2 LINE L1 6317 6566 0 6 1290 1459 275 40 79 chr17 92467827 92468142 -2804509 - RMER19C LTR ERVK -212 399 25 6 1290 208 137 19 19 chr17 92468198 92468219 -2804432 + polypurine Low_complexity Low_complexity 2 23 0 6 1290 969 110 0 0 chr17 92468219 92468364 -2804287 + (GGGA)n Simple_repeat Simple_repeat 4 148 0 6 1290 208 137 19 19 chr17 92468364 92468394 -2804257 + polypurine Low_complexity Low_complexity 24 53 0 6 1290 214 333 30 70 chr17 92468530 92468630 -2804021 - L2a LINE L2 -11 3415 3320 6 1290 360 305 41 0 chr17 92468690 92468800 -2803851 + PB1D9 SINE Alu 1 115 -5 6 1290 224 59 0 29 chr17 92468802 92468837 -2803814 + (ATG)n Simple_repeat Simple_repeat 2 35 0 6 1290 1008 97 14 0 chr17 92469000 92469144 -2803507 + B1_Mus1 SINE Alu 3 148 0 6 1290 21 0 0 0 chr17 92469158 92469179 -2803472 + AT_rich Low_complexity Low_complexity 1 21 0 6 1290 977 143 0 11 chr17 92469179 92469334 -2803317 + GA-rich Low_complexity Low_complexity 2 154 0 6 1290 591 15 0 0 chr17 92469334 92469402 -2803249 + (GGGA)n Simple_repeat Simple_repeat 1 68 0 6 1290 977 143 0 11 chr17 92469402 92469423 -2803228 + polypurine Low_complexity Low_complexity 155 175 0 6 1290 214 333 30 70 chr17 92469568 92469668 -2802983 - L2a LINE L2 -11 3415 3320 6 1290 360 305 41 0 chr17 92469728 92469838 -2802813 + PB1D9 SINE Alu 1 115 -5 6 1290 224 59 0 29 chr17 92469840 92469875 -2802776 + (ATG)n Simple_repeat Simple_repeat 2 35 0 6 1290 1008 97 14 0 chr17 92470038 92470182 -2802469 + B1_Mus1 SINE Alu 3 148 0 6 1290 21 0 0 0 chr17 92470196 92470217 -2802434 + AT_rich Low_complexity Low_complexity 1 21 0 6 1290 1198 84 8 21 chr17 92470217 92470459 -2802192 + (GAAA)n Simple_repeat Simple_repeat 1 238 0 6 1290 221 333 31 10 chr17 92470626 92470723 -2801928 - L2a LINE L2 -552 2867 2769 6 1290 23 68 0 0 chr17 92470862 92470906 -2801745 + AT_rich Low_complexity Low_complexity 1 44 0 6 1290 23 0 0 0 chr17 92471427 92471450 -2801201 + AT_rich Low_complexity Low_complexity 1 23 0 6 1290 874 176 0 0 chr17 92471928 92472070 -2800581 - MT2B LTR ERVL 0 601 460 6 1290 512 135 169 0 chr17 92472070 92472159 -2800492 - MT2B LTR ERVL -497 104 1 6 1290 248 0 31 0 chr17 92472503 92472535 -2800116 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 6 1290 1128 74 0 0 chr17 92472535 92472684 -2799967 - B2_Mm1a SINE B2 -42 151 3 6 1290 198 0 0 0 chr17 92473178 92473200 -2799451 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 6 1290 34 24 0 0 chr17 92473238 92473279 -2799372 + AT_rich Low_complexity Low_complexity 1 41 0 6 1290 492 316 7 0 chr17 92473299 92473438 -2799213 - B1_Mus1 SINE Alu -8 140 1 6 1290 2655 37 12 0 chr17 92474648 92474975 -2797676 - IAPEY_LTR LTR ERVK 0 385 55 6 1290 27 0 0 0 chr17 92475039 92475066 -2797585 + AT_rich Low_complexity Low_complexity 1 27 0 6 1290 382 317 84 18 chr17 92475295 92475462 -2797189 - Lx8 LINE L1 -206 7267 7090 6 1290 886 355 71 20 chr17 92475554 92476255 -2796396 - Lx8 LINE L1 -519 6954 6218 6 1290 987 103 0 0 chr17 92476279 92476425 -2796226 + (GGA)n Simple_repeat Simple_repeat 3 148 0 6 1290 306 325 107 25 chr17 92476491 92476687 -2795964 - MTE2b LTR MaLR -1 378 167 6 1290 220 52 32 65 chr17 92476689 92476751 -2795900 + (TTTTTG)n Simple_repeat Simple_repeat 1 60 0 6 1290 447 50 0 0 chr17 92476753 92476813 -2795838 - B1_Mus2 SINE Alu 0 147 88 6 1290 251 229 0 0 chr17 92476814 92476862 -2795789 - Lx8 LINE L1 -1785 5688 5641 6 1290 1269 162 71 25 chr17 92476865 92477105 -2795546 - ORR1A4 LTR MaLR 0 329 79 6 1290 393 141 0 0 chr17 92477743 92477814 -2794837 + (CA)n Simple_repeat Simple_repeat 2 72 0 6 1290 1158 218 65 55 chr17 92478142 92478597 -2794054 + RMER17A2 LTR ERVK 3 514 -392 6 1290 588 282 39 61 chr17 92478594 92479001 -2793650 + RMER13B LTR ERVK 555 908 0 6 1290 360 189 0 0 chr17 92479246 92479320 -2793331 + A-rich Low_complexity Low_complexity 1 74 0 6 1290 303 172 0 0 chr17 92480536 92480594 -2792057 + Lx7 LINE L1 3005 3062 -2818 6 1290 360 64 0 0 chr17 92480594 92480641 -2792010 + (GGA)n Simple_repeat Simple_repeat 2 48 0 6 1290 5373 219 138 43 chr17 92480651 92482642 -2790009 + Lx7 LINE L1 3073 5264 -616 6 1290 2727 103 5 21 chr17 92482642 92483070 -2789581 + BGLII LTR ERVK 1 421 0 6 1290 5373 219 138 43 chr17 92483070 92483120 -2789531 + Lx7 LINE L1 5265 5309 -571 6 1290 494 249 114 12 chr17 92483097 92483264 -2789387 + Lx7 LINE L1 5840 6023 -1673 6 1290 432 0 0 0 chr17 92483265 92483313 -2789338 + (TC)n Simple_repeat Simple_repeat 2 49 0 6 1290 712 314 23 5 chr17 92484731 92484986 -2787665 - Lx7 LINE L1 -501 7195 6922 6 1290 294 73 0 0 chr17 92485761 92485802 -2786849 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1290 240 35 0 0 chr17 92485803 92485832 -2786819 + (TA)n Simple_repeat Simple_repeat 2 30 0 6 1290 265 246 16 0 chr17 92486178 92486239 -2786412 - Lx7 LINE L1 -743 6953 6892 6 1290 998 261 64 16 chr17 92486243 92486555 -2786096 - Lx7 LINE L1 -1282 6414 6088 6 1290 234 0 0 0 chr17 92486584 92486610 -2786041 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 1290 228 319 0 14 chr17 92486759 92486832 -2785819 + Lx8 LINE L1 6339 6410 -1063 6 1290 3677 154 73 3 chr17 92486825 92486892 -2785759 + L1_Mur1 LINE L1 1935 2007 -3879 6 1290 434 0 61 0 chr17 92486892 92486958 -2785693 + (CAAAA)n Simple_repeat Simple_repeat 2 71 0 6 1290 3677 154 73 3 chr17 92486958 92487611 -2785040 + L1_Mur1 LINE L1 2008 2705 -3181 6 1290 366 359 7 14 chr17 92487632 92487779 -2784872 - RMER13A LTR ERVK -12 848 703 6 1290 2119 252 30 88 chr17 92487799 92488703 -2783948 - RMER17B LTR ERVK -129 829 2 6 1290 17827 144 25 13 chr17 92488704 92489661 -2782990 + Lx3B LINE L1 2703 3661 -2225 6 1290 405 0 0 0 chr17 92489661 92489706 -2782945 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 6 1290 17827 148 33 22 chr17 92489706 92492782 -2779869 + Lx3B LINE L1 3662 6768 -205 6 1290 9550 64 1 60 chr17 92492787 92494193 -2778458 + MMETn-int LTR ERVK 64 1386 -3458 6 1290 677 62 0 0 chr17 92494193 92494289 -2778362 - RLTRETN_Mm LTR ERVK -226 96 1 6 1290 925 199 76 3 chr17 92494293 92494503 -2778148 + Lx3B LINE L1 6769 6999 -1 6 1290 1237 291 48 25 chr17 92494528 92494999 -2777652 + Lx6 LINE L1 5784 6277 -1183 6 1290 1013 303 108 24 chr17 92494996 92495779 -2776872 + Lx6 LINE L1 6519 7433 -27 6 1290 488 138 0 80 chr17 92495780 92495930 -2776721 + GA-rich Low_complexity Low_complexity 3 140 0 6 1290 657 257 75 5 chr17 92495949 92496137 -2776514 - RLTR30 LTR ERV1 -178 201 1 6 1290 925 79 22 0 chr17 92496928 92497067 -2775584 + (GAAA)n Simple_repeat Simple_repeat 3 144 0 6 1290 2008 179 48 3 chr17 92497495 92497871 -2774780 - L1_Mur1 LINE L1 -34 5852 5460 6 1290 993 265 35 66 chr17 92498022 92498341 -2774310 + Lx5 LINE L1 6723 7031 -19 6 1290 333 68 0 0 chr17 92498341 92498385 -2774266 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 6 1290 180 167 0 0 chr17 92499165 92499195 -2773456 + L3 LINE CR1 1895 1924 -2565 6 1290 269 228 0 12 chr17 92499503 92499583 -2773068 + GA-rich Low_complexity Low_complexity 1 79 0 6 1290 459 0 0 0 chr17 92500122 92500173 -2772478 + (TCTCC)n Simple_repeat Simple_repeat 1 51 0 1 1290 717 45 0 0 chr17 92500175 92500264 -2772387 + (TTCC)n Simple_repeat Simple_repeat 3 91 0 2 1290 1278 85 0 0 chr17 92500291 92500468 -2772183 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 3 1290 888 257 33 12 chr17 92500477 92500717 -2771934 - Lx4B LINE L1 -17 7041 6797 4 1290 26 50 0 0 chr17 92501143 92501183 -2771468 + AT_rich Low_complexity Low_complexity 1 40 0 5 1290 437 329 32 76 chr17 92501607 92501857 -2770794 - RLTR26 LTR ERVK -197 445 207 6 1290 502 75 0 0 chr17 92502194 92502261 -2770390 - RLTR23 LTR ERV1 -5 425 359 7 1290 1447 229 81 72 chr17 92502263 92502794 -2769857 + RMER17C-int LTR ERVK 127 662 -2576 8 1290 450 0 0 0 chr17 92502969 92503019 -2769632 + (TC)n Simple_repeat Simple_repeat 1 50 0 9 1290 3043 26 84 0 chr17 92503041 92503420 -2769231 - IAPLTR2a LTR ERVK 0 411 1 1 1290 2408 156 98 32 chr17 92503511 92504331 -2768320 + RMER17C-int LTR ERVK 2243 2847 -391 8 1290 261 0 0 0 chr17 92504332 92504361 -2768290 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 1290 270 0 0 0 chr17 92504361 92504390 -2768261 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 1290 222 37 0 0 chr17 92504390 92504416 -2768235 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1290 456 77 0 0 chr17 92504416 92504481 -2768170 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 1290 1736 171 50 6 chr17 92504481 92504804 -2767847 + RMER17C-int LTR ERVK 2900 3236 -2 8 1290 226 310 0 0 chr17 92504806 92504864 -2767787 + RMER17C LTR ERVK 1 58 -352 8 1290 1343 119 5 14 chr17 92504876 92505098 -2767553 - MusHAL1 LINE L1 -2240 472 253 1 1290 1153 132 10 0 chr17 92505095 92505300 -2767351 + MusHAL1 LINE L1 427 633 -2079 1 1290 18348 186 29 10 chr17 92505273 92506288 -2766363 + Lx LINE L1 2022 3054 -2832 1 1290 198 0 0 0 chr17 92506288 92506310 -2766341 + (CAA)n Simple_repeat Simple_repeat 3 24 0 1 1290 18348 186 29 10 chr17 92506310 92506402 -2766249 + Lx LINE L1 3055 3141 -2745 1 1290 256 0 50 25 chr17 92506402 92506442 -2766209 + (CAAAA)n Simple_repeat Simple_repeat 3 43 0 1 1290 18348 186 29 10 chr17 92506442 92506783 -2765868 + Lx LINE L1 3142 3479 -2407 1 1290 392 53 53 0 chr17 92506783 92506859 -2765792 + (CAAA)n Simple_repeat Simple_repeat 1 80 0 1 1290 18348 186 29 10 chr17 92506859 92507975 -2764676 + Lx LINE L1 3480 4645 -1241 1 1290 183 42 0 0 chr17 92507975 92507999 -2764652 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1290 18348 184 30 17 chr17 92507999 92509993 -2762658 + Lx LINE L1 4646 6649 -5 1 1290 450 288 94 46 chr17 92510477 92510939 -2761712 + L1M2 LINE L1 5261 5751 -549 2 1290 1951 221 20 143 chr17 92511600 92512297 -2760354 + RMER19C LTR ERVK 1 611 0 2 1290 2606 146 93 36 chr17 92512662 92512787 -2759864 - Lx LINE L1 0 6654 6535 2 1290 183 42 0 0 chr17 92512787 92512811 -2759840 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 2 1290 2606 146 93 36 chr17 92512811 92513190 -2759461 - Lx LINE L1 -120 6534 6122 2 1290 488 322 51 22 chr17 92513646 92513824 -2758827 + B3A SINE B2 1 183 -15 2 1290 226 218 0 35 chr17 92513964 92514021 -2758630 + (TATATG)n Simple_repeat Simple_repeat 6 60 0 2 1290 261 363 75 38 chr17 92514211 92514423 -2758228 + Lx8 LINE L1 7034 7253 -220 2 1290 380 328 8 60 chr17 92514627 92514760 -2757891 - B1_Mur3 SINE Alu -22 127 2 2 1290 1372 273 50 10 chr17 92514820 92515219 -2757432 + MTC LTR MaLR 7 421 0 2 1290 1624 258 108 10 chr17 92515222 92515703 -2756948 + MTC-int LTR MaLR 5 532 -726 2 1290 5465 37 0 1 chr17 92515703 92516361 -2756290 - L1Md_A LINE L1 0 6582 5926 3 1290 12248 30 1 1 chr17 92516361 92517856 -2754795 + L1_Mm LINE L1 2199 3694 -2189 3 1290 342 164 0 0 chr17 92517856 92517917 -2754734 + MTC-int LTR MaLR 1164 1224 -739 2 1290 365 282 13 0 chr17 92517910 92517988 -2754663 - B1_Mur4 SINE Alu -53 97 19 3 1290 397 119 0 0 chr17 92518088 92518147 -2754504 - B1_Mus1 SINE Alu -88 60 2 3 1290 2413 232 49 51 chr17 92518264 92518965 -2753686 + MTC-int LTR MaLR 444 1258 0 3 1290 819 248 233 9 chr17 92518974 92519311 -2753340 + MTC LTR MaLR 10 421 0 3 1290 180 0 0 0 chr17 92519571 92519591 -2753060 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 3 1290 388 364 74 49 chr17 92519641 92519693 -2752958 - B4A SINE B4 -24 268 217 3 1290 432 0 0 0 chr17 92519693 92519741 -2752910 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 1290 388 364 74 49 chr17 92519741 92519931 -2752720 - B4A SINE B4 -76 216 22 3 1290 262 337 0 0 chr17 92520068 92520169 -2752482 + (CA)n Simple_repeat Simple_repeat 2 102 0 3 1290 241 284 106 24 chr17 92520326 92520618 -2752033 + L1_Mur3 LINE L1 3111 3426 -2454 3 1290 886 241 183 22 chr17 92520689 92521011 -2751640 - ORR1D1 LTR MaLR 0 374 1 4 1290 276 149 0 0 chr17 92521465 92521512 -2751139 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 4 1290 273 29 0 0 chr17 92521673 92521707 -2750944 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1290 21 57 0 0 chr17 92521985 92522020 -2750631 + AT_rich Low_complexity Low_complexity 1 35 0 4 1290 1626 157 54 3 chr17 92522893 92523187 -2749464 + RLTR27 LTR ERVK 1 309 0 4 1290 1084 201 77 25 chr17 92523665 92523900 -2748751 + RMER20B LTR ERVK 1 247 -380 4 1290 947 71 0 0 chr17 92523894 92524021 -2748630 + B1_Mus2 SINE Alu 21 147 0 4 1290 758 208 7 7 chr17 92524039 92524189 -2748462 + RMER20B LTR ERVK 230 379 -248 4 1290 1000 221 33 116 chr17 92524219 92524521 -2748130 + RMER20B LTR ERVK 351 627 0 4 1290 592 200 15 0 chr17 92525673 92525808 -2746843 - L1_Mur1 LINE L1 -1475 4402 4266 4 1290 25 0 0 0 chr17 92525808 92525833 -2746818 + AT_rich Low_complexity Low_complexity 1 25 0 4 1290 884 152 96 21 chr17 92525915 92526103 -2746548 - Lx LINE L1 -7 6647 6446 4 1290 2391 166 14 2 chr17 92526105 92526547 -2746104 - L1_Mur1 LINE L1 -1724 4153 3707 4 1290 34700 80 2 9 chr17 92526543 92532874 -2739777 - L1Md_F2 LINE L1 -1 6581 310 5 1290 3086 149 18 5 chr17 92532890 92533462 -2739189 - L1_Mur1 LINE L1 -2164 3722 3144 4 1290 4754 138 67 4 chr17 92533462 92534257 -2738394 + Lx LINE L1 5799 6643 -11 5 1290 1796 192 0 9 chr17 92534256 92534592 -2738059 + Lx3A LINE L1 6645 6977 -4 5 1290 549 99 0 0 chr17 92534594 92534675 -2737976 + (TA)n Simple_repeat Simple_repeat 1 81 0 5 1290 248 297 0 39 chr17 92534820 92534897 -2737754 + BC1_Mm scRNA scRNA 1 74 -78 5 1290 2866 38 9 0 chr17 92535173 92535516 -2737135 + ORR1A0 LTR MaLR 1 346 0 5 1290 4181 76 2 0 chr17 92536121 92536697 -2735954 + L1Md_F2 LINE L1 6012 6582 0 5 1290 588 146 0 0 chr17 92536702 92536791 -2735860 + L1_Mur2 LINE L1 3713 3801 -2076 5 161 3379 57 14 2 chr17 92536797 92537239 -2735412 + L1Md_F2 LINE L1 6136 6582 0 5 1291 225 0 0 0 chr17 92537517 92537542 -2735109 + (GA)n Simple_repeat Simple_repeat 2 26 0 5 1291 1304 245 14 50 chr17 92537542 92537984 -2734667 + L1_Mur3 LINE L1 2395 2820 -3060 6 1291 341 108 75 58 chr17 92537986 92538073 -2734578 - L1_Mur2 LINE L1 -2308 3569 3487 6 1291 24 32 0 0 chr17 92538142 92538173 -2734478 + AT_rich Low_complexity Low_complexity 1 31 0 6 1291 450 0 0 0 chr17 92539242 92539292 -2733359 + (TC)n Simple_repeat Simple_repeat 2 51 0 6 1291 213 39 0 0 chr17 92539294 92539320 -2733331 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 1291 30 27 0 0 chr17 92539768 92539805 -2732846 + AT_rich Low_complexity Low_complexity 1 37 0 6 1291 1220 135 5 0 chr17 92539975 92540160 -2732491 - B2_Mm1t SINE B2 -6 187 2 6 1291 34 0 0 0 chr17 92540888 92540922 -2731729 + AT_rich Low_complexity Low_complexity 1 34 0 6 1291 918 201 21 5 chr17 92541126 92541316 -2731335 - RMER6C LTR ERVK -14 676 484 6 1291 1101 192 78 4 chr17 92541402 92541632 -2731019 - RMER6C LTR ERVK -443 247 1 6 1291 2282 266 79 17 chr17 92541887 92542561 -2730090 + RMER1B Other Other 32 1065 -1 6 1291 443 238 118 37 chr17 92542594 92542729 -2729922 + B1_Mus2 SINE Alu 1 146 -1 7 1291 27 62 0 0 chr17 92542989 92543037 -2729614 + AT_rich Low_complexity Low_complexity 1 48 0 7 1291 212 227 30 0 chr17 92544271 92544337 -2728314 + (TA)n Simple_repeat Simple_repeat 1 68 0 7 1291 388 321 64 41 chr17 92544978 92545315 -2727336 - RLTR16 LTR ERVK -260 432 33 7 1291 345 292 19 19 chr17 92545360 92545468 -2727183 + RLTR25A LTR ERVK 1 108 -995 7 1291 2155 135 59 95 chr17 92545469 92545912 -2726739 - RLTR23 LTR ERV1 -1 429 3 7 1291 1695 175 55 0 chr17 92545912 92546220 -2726431 + ORR1A3 LTR MaLR 1 326 0 7 1291 617 297 29 21 chr17 92546338 92546617 -2726034 - RLTR6-int LTR ERV1 -191 7587 7113 7 1291 917 173 39 0 chr17 92546940 92547096 -2725555 - BGLII_A LTR ERVK -283 162 1 7 1291 769 207 52 82 chr17 92547208 92547440 -2725211 + URR1A DNA MER1_type 1 225 -1 7 1291 347 304 26 17 chr17 92547462 92547579 -2725072 + L1M2 LINE L1 5652 5769 -543 8 1291 653 254 17 39 chr17 92547686 92547866 -2724785 + Lx9 LINE L1 6455 6630 -1014 8 1291 351 245 235 0 chr17 92547863 92547961 -2724690 + Lx9 LINE L1 6834 6954 -690 8 1291 486 0 0 0 chr17 92548051 92548105 -2724546 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 8 1291 22 35 0 0 chr17 92550237 92550266 -2722385 + AT_rich Low_complexity Low_complexity 1 29 0 8 1291 664 334 68 30 chr17 92550386 92550815 -2721836 - Lx8 LINE L1 -452 7021 6577 8 1291 497 292 34 17 chr17 92550929 92551105 -2721546 - Lx8 LINE L1 -1121 6523 6200 8 1291 305 265 20 0 chr17 92551110 92551166 -2721485 + polypurine Low_complexity Low_complexity 1 57 0 8 1291 694 32 21 0 chr17 92551166 92551259 -2721392 + (TAGA)n Simple_repeat Simple_repeat 2 96 0 8 1291 305 265 20 0 chr17 92551259 92551300 -2721351 + polypurine Low_complexity Low_complexity 58 99 0 8 1291 800 259 64 59 chr17 92551590 92551947 -2720704 + RLTR10D LTR ERVK 1 359 0 8 1291 2935 211 87 27 chr17 92552127 92553445 -2719206 - Lx LINE L1 0 6654 5235 8 1291 520 297 68 141 chr17 92553490 92553987 -2718664 + RLTR12B LTR ERVK 25 485 -43 9 1291 218 75 50 0 chr17 92554490 92554530 -2718121 + (CAGAA)n Simple_repeat Simple_repeat 4 45 0 9 1291 243 88 0 0 chr17 92554532 92554566 -2718085 + (CGAGG)n Simple_repeat Simple_repeat 2 35 0 9 1291 621 0 0 0 chr17 92554566 92554634 -2718017 + (GAGAA)n Simple_repeat Simple_repeat 3 71 0 9 1291 431 197 15 22 chr17 92554647 92554782 -2717869 + GA-rich Low_complexity Low_complexity 3 136 0 9 1291 330 330 44 9 chr17 92554983 92555096 -2717555 + RLTR18 LTR ERVK 500 616 0 9 1291 324 263 51 26 chr17 92555308 92555425 -2717226 + MER34A LTR ERV1 29 148 -423 9 1291 818 285 9 18 chr17 92555637 92555862 -2716789 - RLTR18 LTR ERVK -6 610 388 9 1291 180 147 14 56 chr17 92555924 92555996 -2716655 + T-rich Low_complexity Low_complexity 4 72 0 9 1291 206 32 32 0 chr17 92556597 92556628 -2716023 + (CA)n Simple_repeat Simple_repeat 2 33 0 9 1291 236 351 83 50 chr17 92557130 92557250 -2715401 - MER34A LTR ERV1 -443 128 5 1 1291 23 33 0 0 chr17 92557354 92557384 -2715267 + AT_rich Low_complexity Low_complexity 1 30 0 1 1291 267 303 0 0 chr17 92557695 92557761 -2714890 + RSINE1 SINE B4 18 83 -82 1 1291 250 263 13 26 chr17 92558503 92558581 -2714070 + ORR1E LTR MaLR 97 173 -186 1 1291 301 214 71 0 chr17 92559293 92559377 -2713274 + L1MA6 LINE L1 6116 6205 -95 1 1291 29 0 0 0 chr17 92559685 92559714 -2712937 + AT_rich Low_complexity Low_complexity 1 29 0 1 1291 510 79 0 0 chr17 92559885 92559961 -2712690 + (TG)n Simple_repeat Simple_repeat 2 77 0 1 1291 276 30 0 0 chr17 92560161 92560194 -2712457 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1291 193 98 24 24 chr17 92560203 92560245 -2712406 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1 1291 246 116 0 0 chr17 92560926 92560969 -2711682 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 1291 285 357 43 11 chr17 92562053 92562237 -2710414 - MLT1F1 LTR MaLR -9 560 371 1 1291 198 0 0 0 chr17 92562237 92562259 -2710392 + (CAAT)n Simple_repeat Simple_repeat 2 23 0 1 1291 726 109 0 0 chr17 92562953 92563063 -2709588 + (CA)n Simple_repeat Simple_repeat 2 111 0 1 1291 662 145 89 0 chr17 92563066 92563190 -2709461 - RLTR9A LTR ERVK 0 368 234 1 1291 7513 62 5 9 chr17 92563203 92564593 -2708058 - L1Md_F2 LINE L1 -8 6574 5193 1 1291 2028 87 0 0 chr17 92564585 92564861 -2707790 + L1_Mm LINE L1 3644 3919 -1964 1 1291 501 261 43 14 chr17 92564853 92565063 -2707588 - L1_Mur3 LINE L1 -6593 1119 904 1 1291 861 252 27 9 chr17 92565329 92565549 -2707102 - URR1B DNA MER1_type 0 225 2 1 1291 279 175 0 0 chr17 92566782 92566839 -2705812 + (CATA)n Simple_repeat Simple_repeat 2 58 0 1 1291 21 36 0 0 chr17 92566916 92566944 -2705707 + AT_rich Low_complexity Low_complexity 1 28 0 1 1291 414 134 0 0 chr17 92566980 92567047 -2705604 + (TA)n Simple_repeat Simple_repeat 1 67 0 1 1291 24 77 0 0 chr17 92567243 92567295 -2705356 + AT_rich Low_complexity Low_complexity 1 52 0 1 1291 568 202 10 0 chr17 92567545 92567644 -2705007 + B1_Mus2 SINE Alu 7 106 -41 1 1291 463 290 95 75 chr17 92567781 92568075 -2704576 - MER2 DNA MER2_type -15 330 31 1 1291 479 325 14 89 chr17 92568216 92568418 -2704233 + B3 SINE B2 1 186 -30 1 1291 198 71 0 0 chr17 92568418 92568446 -2704205 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 1291 627 317 104 13 chr17 92568615 92568917 -2703734 - ORR1D2 LTR MaLR -10 349 2 1 1291 564 218 84 0 chr17 92568918 92569060 -2703591 - ORR1D2-int LTR MaLR -1 1369 1216 1 1291 956 270 88 49 chr17 92569054 92569358 -2703293 - ORR1D2 LTR MaLR -4 366 51 1 1291 1082 163 8 129 chr17 92569358 92569745 -2702906 + RMER17C LTR ERVK 1 340 -70 1 1291 506 220 25 0 chr17 92569756 92569874 -2702777 - RMER17C LTR ERVK -289 121 1 1 1291 1608 246 63 8 chr17 92569937 92570335 -2702316 - ORR1D2-int LTR MaLR -10 1360 941 1 1291 445 333 126 54 chr17 92570791 92571108 -2701543 - MLT1A0 LTR MaLR -3 362 23 1 1291 473 366 35 0 chr17 92571362 92571534 -2701117 - MTEa LTR MaLR -201 178 1 1 1291 31 58 0 0 chr17 92571835 92571887 -2700764 + AT_rich Low_complexity Low_complexity 1 52 0 1 1291 3499 170 6 3 chr17 92571902 92572544 -2700107 - L1_Mur1 LINE L1 -699 5187 4544 1 1291 5498 82 31 7 chr17 92572544 92573306 -2699345 + L1Md_F2 LINE L1 5795 6575 -7 1 1291 38 0 0 0 chr17 92573306 92573344 -2699307 + AT_rich Low_complexity Low_complexity 1 38 0 1 1291 340 374 0 18 chr17 92574082 92574248 -2698403 + RSINE1 SINE B4 3 165 0 1 1291 22 35 0 0 chr17 92574302 92574331 -2698320 + AT_rich Low_complexity Low_complexity 1 29 0 1 1291 26459 52 148 20 chr17 92574854 92579333 -2693318 + L1Md_T LINE L1 540 5585 -298 1 1291 7938 58 1 0 chr17 92579334 92580329 -2692322 + L1Md_T LINE L1 5587 6582 0 1 1291 236 153 0 53 chr17 92580336 92580412 -2692239 + A-rich Low_complexity Low_complexity 1 72 0 1 1291 237 83 0 0 chr17 92580643 92580679 -2691972 + (CAG)n Simple_repeat Simple_repeat 2 37 0 1 1291 327 49 0 0 chr17 92580894 92580935 -2691716 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 1 1291 15416 27 8 0 chr17 92581058 92582885 -2689766 + L1Md_A LINE L1 3745 5586 -297 1 1291 8496 29 0 0 chr17 92582885 92583880 -2688771 + L1Md_A LINE L1 5587 6581 -1 1 1291 183 305 11 58 chr17 92584919 92585006 -2687645 - L4 LINE RTE -1104 925 843 1 1291 3275 41 5 0 chr17 92585589 92585983 -2686668 - MTA_Mm LTR MaLR 0 396 1 1 1291 7871 62 19 3 chr17 92585983 92586687 -2685964 - MTA_Mm-int LTR MaLR 0 1098 377 1 1291 4304 78 0 0 chr17 92586687 92587254 -2685397 - L1Md_T LINE L1 0 6582 6016 1 1291 7871 62 19 3 chr17 92587254 92587629 -2685022 - MTA_Mm-int LTR MaLR -722 376 1 1 1291 3188 58 5 0 chr17 92587629 92588023 -2684628 - MTA_Mm LTR MaLR 0 396 1 1 1291 205 281 18 0 chr17 92588111 92588168 -2684483 + CT-rich Low_complexity Low_complexity 1 58 0 1 1291 21 36 0 0 chr17 92588377 92588405 -2684246 + AT_rich Low_complexity Low_complexity 1 28 0 1 1291 635 290 35 54 chr17 92588522 92588568 -2684083 + RMER5 LTR ERV1 20 59 -475 1 1291 2938 137 14 10 chr17 92588568 92589064 -2683587 + Lx LINE L1 6154 6651 -3 1 1291 635 290 35 54 chr17 92589064 92589276 -2683375 + RMER5 LTR ERV1 60 272 -262 1 1291 405 0 0 0 chr17 92590849 92590894 -2681757 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 1291 5899 111 43 65 chr17 92591041 92592121 -2680530 + Lx3A LINE L1 4892 6114 -867 1 1291 869 93 0 8 chr17 92592121 92592251 -2680400 + (GGA)n Simple_repeat Simple_repeat 3 131 0 1 1291 4995 129 229 5 chr17 92592251 92592856 -2679795 + Lx3A LINE L1 6115 6727 -254 1 1291 1788 233 49 0 chr17 92592859 92593267 -2679384 - Lx6 LINE L1 -516 6944 6517 1 1291 302 265 41 0 chr17 92593298 92593396 -2679255 - Lx7 LINE L1 -1529 6167 6066 1 1291 1147 223 123 18 chr17 92593480 92593822 -2678829 - RMER16 LTR ERVK -1 532 155 1 1291 555 302 60 0 chr17 92593850 92594065 -2678586 - Lx7 LINE L1 -1714 5982 5755 1 1291 848 194 58 0 chr17 92594059 92594250 -2678401 - L1_Mur3 LINE L1 -1610 4270 4069 1 1291 4508 30 0 0 chr17 92595165 92595706 -2676945 - L1_Mm LINE L1 -1485 4398 3858 1 1291 5299 32 0 0 chr17 92595703 92596336 -2676315 + L1Md_F2 LINE L1 4954 5586 -297 1 1291 7880 50 1 6 chr17 92596336 92597323 -2675328 + L1Md_F2 LINE L1 5587 6568 -14 1 1291 1027 98 0 53 chr17 92598468 92598619 -2674032 + B1_Mus1 SINE Alu 2 144 -4 1 1291 360 326 59 118 chr17 92599755 92600162 -2672489 - RLTR11A2 LTR ERVK -67 461 79 1 1291 956 235 81 2 chr17 92600546 92600783 -2671868 + Lx4B LINE L1 6162 6412 -596 1 1291 243 0 0 0 chr17 92600783 92600810 -2671841 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1 1291 605 186 0 8 chr17 92600812 92600942 -2671709 + GA-rich Low_complexity Low_complexity 2 130 0 1 1291 2835 202 46 40 chr17 92600961 92601617 -2671034 + Lx4B LINE L1 6388 7047 -11 1 1291 618 14 0 0 chr17 92601639 92601710 -2670941 + (GA)n Simple_repeat Simple_repeat 2 72 0 1 1291 4167 163 33 45 chr17 92601775 92602599 -2670052 + Lx2 LINE L1 6183 6996 -1 1 1291 4015 145 38 11 chr17 92602896 92603602 -2669049 - Lx LINE L1 -11 6643 5919 1 1291 22 35 0 0 chr17 92603861 92603890 -2668761 + AT_rich Low_complexity Low_complexity 1 29 0 1 1291 25811 172 39 47 chr17 92604012 92607196 -2665455 + L1_Mus3 LINE L1 418 3524 -2359 1 1291 3501 45 28 2 chr17 92607196 92607621 -2665030 + RLTR10C LTR ERVK 1 436 0 1 1291 25811 134 28 20 chr17 92607621 92610683 -2661968 + L1_Mus3 LINE L1 3525 6638 0 1 1291 40 79 0 0 chr17 92611061 92611150 -2661501 + AT_rich Low_complexity Low_complexity 1 89 0 1 1291 23 0 0 0 chr17 92611205 92611228 -2661423 + AT_rich Low_complexity Low_complexity 1 23 0 1 1291 1211 248 9 43 chr17 92611235 92611290 -2661361 - Lx9 LINE L1 -710 6934 6886 1 1291 2255 78 119 11 chr17 92611290 92611642 -2661009 - RLTR10 LTR ERVK 0 390 1 1 1291 1211 248 9 43 chr17 92611642 92611915 -2660736 - Lx9 LINE L1 -759 6885 6617 1 1291 517 248 204 0 chr17 92611922 92612142 -2660509 + Lx9 LINE L1 7004 7268 -376 1 1291 414 232 23 75 chr17 92612149 92612363 -2660288 + Lx9 LINE L1 7441 7643 -1 1 1291 23 54 0 0 chr17 92612451 92612488 -2660163 + AT_rich Low_complexity Low_complexity 1 37 0 1 1291 402 254 136 34 chr17 92612990 92613137 -2659514 - Lx8 LINE L1 -271 7202 7041 1 1291 342 329 37 62 chr17 92613234 92613477 -2659174 + Lx8 LINE L1 7225 7461 -12 1 1291 468 0 0 0 chr17 92613574 92613626 -2659025 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 1291 2616 156 48 23 chr17 92613626 92613701 -2658950 + L1_Mur2 LINE L1 1488 1561 -4316 1 1291 180 0 0 0 chr17 92613701 92613721 -2658930 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 1 1291 2616 156 48 23 chr17 92613721 92614208 -2658443 + L1_Mur2 LINE L1 1562 2064 -3813 1 1291 2526 171 136 13 chr17 92614212 92614737 -2657914 + L1_Mur2 LINE L1 2889 3483 -2394 1 1291 423 98 0 0 chr17 92614737 92614798 -2657853 + (CAG)n Simple_repeat Simple_repeat 1 61 0 1 1291 2526 171 136 13 chr17 92614798 92614983 -2657668 + L1_Mur2 LINE L1 3484 3686 -2191 1 1291 6858 183 46 10 chr17 92614951 92616383 -2656268 + L1_Mur2 LINE L1 4278 5791 -387 1 1291 513 0 0 0 chr17 92616632 92616689 -2655962 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 1291 336 373 20 7 chr17 92616798 92616949 -2655702 - RSINE1 SINE B4 -2 163 11 1 1291 331 298 14 7 chr17 92617137 92617279 -2655372 + L1MC3 LINE L1 7367 7509 -276 1 1291 412 219 8 48 chr17 92617289 92617335 -2655316 - MT2A LTR ERVL 0 533 490 1 1291 189 121 0 0 chr17 92617335 92617368 -2655283 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1291 412 219 8 48 chr17 92617368 92617446 -2655205 - MT2A LTR ERVL -44 489 415 1 1291 255 324 9 71 chr17 92617468 92617581 -2655070 - MT2A LTR ERVL -233 300 195 1 1291 389 82 33 0 chr17 92619365 92619426 -2653225 + (TATATG)n Simple_repeat Simple_repeat 2 64 0 1 1291 21 36 0 0 chr17 92620931 92620959 -2651692 + AT_rich Low_complexity Low_complexity 1 28 0 1 1291 932 134 6 0 chr17 92621019 92621176 -2651475 + (TC)n Simple_repeat Simple_repeat 1 158 0 1 1291 8550 127 9 10 chr17 92621177 92622864 -2649787 - Lx3A LINE L1 -9 6972 5291 1 1291 348 286 12 0 chr17 92623813 92623897 -2648754 - Lx8 LINE L1 -275 7198 7114 1 1291 209 261 0 0 chr17 92624132 92624178 -2648473 - MIR SINE MIR -139 123 78 1 1291 481 359 51 3 chr17 92625075 92625371 -2647280 - Lx8 LINE L1 -52 7421 7112 1 1291 4075 254 75 56 chr17 92625492 92625731 -2646920 - Lx5 LINE L1 -3 7047 6822 1 1291 423 0 0 0 chr17 92625731 92625778 -2646873 + (CAGG)n Simple_repeat Simple_repeat 1 47 0 1 1291 4075 254 75 56 chr17 92625778 92626825 -2645826 - Lx5 LINE L1 -229 6821 5737 1 1291 20137 193 16 14 chr17 92626815 92628546 -2644105 - Lx2 LINE L1 -12 6985 5239 1 1291 243 0 0 0 chr17 92628546 92628573 -2644078 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 1291 20137 205 31 32 chr17 92628573 92633641 -2639010 - Lx2 LINE L1 -648 5238 300 1 1291 931 154 6 6 chr17 92633687 92633857 -2638794 - Lx2 LINE L1 0 6997 6828 1 1291 2373 168 31 2 chr17 92633857 92634305 -2638346 + Lx2 LINE L1 5814 6274 -723 1 1291 5402 208 47 44 chr17 92634313 92634693 -2637958 - L1_Mur2 LINE L1 -135 5742 5340 1 1291 5904 62 1 34 chr17 92634693 92635498 -2637153 + L1_Mus2 LINE L1 5786 6564 -2 1 1291 5402 208 47 44 chr17 92635498 92636510 -2636141 - L1_Mur2 LINE L1 -538 5339 4345 1 1291 3119 194 58 56 chr17 92636569 92636831 -2635820 - L1_Mur2 LINE L1 -2903 2974 2708 1 1291 185 0 40 0 chr17 92636831 92636856 -2635795 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 1291 1089 88 0 13 chr17 92636858 92637007 -2635644 - B1_Mus1 SINE Alu 0 148 2 2 1291 3119 194 58 56 chr17 92637007 92637398 -2635253 - L1_Mur2 LINE L1 -3170 2707 2296 1 1291 1080 49 7 7 chr17 92637398 92637543 -2635108 + L1_Mus1 LINE L1 6422 6566 -1 2 1291 3119 194 58 56 chr17 92637543 92637689 -2634962 - L1_Mur2 LINE L1 -3582 2295 2169 1 1291 702 192 51 17 chr17 92637684 92637859 -2634792 - L1_Mur2 LINE L1 -5963 1123 943 1 1291 5681 204 53 14 chr17 92638121 92639860 -2632791 + MurERV4_19-int LTR ERVK 2497 4809 -971 2 1291 10575 23 1 0 chr17 92639861 92641774 -2630877 - L1Md_A LINE L1 -1 6581 4668 2 1291 2955 186 14 80 chr17 92641774 92642694 -2629957 + MurERV4_19-int LTR ERVK 4811 5775 -5 2 1291 423 318 60 26 chr17 92642710 92643059 -2629592 - L1M5 LINE L1 -3061 3085 2725 2 1291 24 77 0 0 chr17 92643380 92643432 -2629219 + AT_rich Low_complexity Low_complexity 1 52 0 2 1291 210 228 25 12 chr17 92643532 92643612 -2629039 + (TAAA)n Simple_repeat Simple_repeat 2 82 0 2 1291 641 285 11 5 chr17 92643614 92643801 -2628850 - Lx7 LINE L1 -382 7314 7127 2 1291 236 293 13 0 chr17 92643894 92643969 -2628682 - L1_Mur3 LINE L1 -6596 1116 1041 2 1291 278 292 31 43 chr17 92644053 92644214 -2628437 - L1_Mur3 LINE L1 -6713 999 841 2 1291 7592 7 0 0 chr17 92644394 92645239 -2627412 - L1Md_A LINE L1 0 6582 5738 2 1291 335 292 75 38 chr17 92645311 92645354 -2627297 - Lx7 LINE L1 -344 7352 7313 2 1291 189 74 0 0 chr17 92645354 92645381 -2627270 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1291 335 292 75 38 chr17 92645381 92645497 -2627154 - Lx7 LINE L1 -384 7312 7187 2 1291 341 103 0 33 chr17 92645555 92645615 -2627036 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 2 1291 457 361 42 54 chr17 92645620 92646045 -2626606 - Lx7 LINE L1 -587 7109 6690 2 1291 1711 256 33 84 chr17 92646393 92647025 -2625626 + ORR1A3-int LTR MaLR 228 827 -1136 2 1291 3882 219 62 44 chr17 92647019 92647476 -2625175 + ORR1A3-int LTR MaLR 714 1164 -799 2 1291 332 207 0 22 chr17 92647476 92647565 -2625086 - L1Md_A LINE L1 -3 6579 6493 2 1291 3882 220 70 39 chr17 92647565 92648251 -2624400 + ORR1A3-int LTR MaLR 1027 1772 -191 2 1291 3040 46 147 0 chr17 92648251 92648665 -2623986 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1291 5766 50 13 20 chr17 92648667 92649416 -2623235 - IAPEz-int LTR ERVK -2 6479 5736 2 1291 10352 59 62 33 chr17 92649415 92650861 -2621790 - IAPEz-int LTR ERVK -4845 1636 150 2 1291 651 197 95 0 chr17 92650927 92651064 -2621587 + B1_Mur4 SINE Alu 1 150 0 2 1291 4463 190 19 1 chr17 92651193 92652069 -2620582 + L1_Mm LINE L1 4616 5507 -376 2 1291 424 286 196 8 chr17 92652066 92652331 -2620320 - Lx6 LINE L1 -693 7003 6667 2 1291 1169 259 97 56 chr17 92652349 92653079 -2619572 + RMER19C LTR ERVK 10 709 -28 2 1291 2408 267 62 14 chr17 92653086 92653796 -2618855 - Lx6 LINE L1 -810 6650 5907 2 1291 4201 44 0 2 chr17 92653819 92654324 -2618327 - L1Md_F2 LINE L1 -15 6567 6064 2 1291 4514 45 8 1 chr17 92654326 92655056 -2617595 + L1Md_A LINE L1 5325 6059 -523 2 1291 460 262 30 15 chr17 92655053 92655251 -2617400 - Lx6 LINE L1 -1537 5923 5723 2 1291 180 0 0 0 chr17 92655276 92655296 -2617355 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1291 1113 95 0 0 chr17 92655296 92655444 -2617207 - B1_Mus1 SINE Alu 0 148 1 2 1291 243 193 86 17 chr17 92655448 92655506 -2617145 - Lx5 LINE L1 -1314 5736 5675 2 1291 304 325 125 7 chr17 92656096 92656248 -2616403 - L1MEb LINE L1 -4819 1814 1645 2 1291 420 317 10 25 chr17 92656408 92656738 -2615913 - L1MEb LINE L1 -5181 1452 1124 2 1291 23 54 0 0 chr17 92657117 92657154 -2615497 + AT_rich Low_complexity Low_complexity 1 37 0 2 1291 8417 34 1 0 chr17 92657280 92658274 -2614377 + L1Md_T LINE L1 5587 6581 -1 2 1291 180 111 0 0 chr17 92658282 92658309 -2614342 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1291 1109 83 0 0 chr17 92658595 92658740 -2613911 + B1_Mm SINE Alu 1 145 -2 2 1291 243 0 0 0 chr17 92658740 92658767 -2613884 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1291 288 0 0 0 chr17 92658884 92658916 -2613735 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2 1291 810 41 16 24 chr17 92659652 92659777 -2612874 - L1Md_F3 LINE L1 -1 6583 6460 2 1291 1582 232 31 14 chr17 92660040 92660782 -2611869 + L1_Mur2 LINE L1 920 1685 -4192 2 1291 243 0 0 0 chr17 92661876 92661903 -2610748 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1291 8617 31 0 0 chr17 92662004 92663017 -2609634 + L1_Mm LINE L1 4574 5586 -297 2 1291 8244 40 1 0 chr17 92663017 92664011 -2608640 + L1Md_A LINE L1 5587 6581 -1 2 1291 8617 31 0 0 chr17 92664011 92664023 -2608628 + L1_Mm LINE L1 5587 5598 -285 2 1291 1259 221 20 3 chr17 92664246 92664546 -2608105 + L1_Mur2 LINE L1 1679 1983 -3894 2 1291 923 170 5 91 chr17 92664526 92664562 -2608089 + L1_Mur2 LINE L1 3652 3678 -2199 2 1291 326 92 0 0 chr17 92664562 92664627 -2608024 - L1_Mus4 LINE L1 0 6636 6572 2 1291 923 170 5 91 chr17 92664627 92664810 -2607841 + L1_Mur2 LINE L1 3679 3852 -2025 2 1291 1866 262 37 84 chr17 92664811 92665596 -2607055 + RMER17B LTR ERVK 1 739 -219 2 1291 1942 209 5 0 chr17 92665596 92665993 -2606658 + L1_Mur2 LINE L1 5247 5645 -232 2 1291 1813 259 44 19 chr17 92665983 92666600 -2606051 + Lx4B LINE L1 6271 6995 -63 2 1291 210 71 0 0 chr17 92666618 92666646 -2606005 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 2 1291 264 297 60 12 chr17 92666904 92667071 -2605580 - Tigger7 DNA MER2_type -49 2442 2268 2 1291 253 183 12 35 chr17 92667119 92667204 -2605447 + (TA)n Simple_repeat Simple_repeat 2 84 0 2 1291 250 330 82 60 chr17 92667270 92667454 -2605197 - MIR SINE MIR -26 236 49 2 1291 1046 164 0 5 chr17 92667454 92667638 -2605013 - Lx LINE L1 -687 5196 5014 2 161 5533 134 45 17 chr17 92667645 92669061 -2603590 + Lx LINE L1 5175 6654 0 2 1292 23 33 0 0 chr17 92669144 92669174 -2603477 + AT_rich Low_complexity Low_complexity 1 30 0 2 1292 1548 164 0 7 chr17 92669524 92669795 -2602856 - Lx LINE L1 -6 6648 6380 2 1292 582 200 0 0 chr17 92669801 92669906 -2602745 - L1_Mur2 LINE L1 -1747 4130 4026 2 1292 977 197 5 10 chr17 92669891 92670096 -2602555 + L1_Mur2 LINE L1 4994 5197 -680 2 1292 243 210 16 16 chr17 92670097 92670160 -2602491 + (TATG)n Simple_repeat Simple_repeat 1 63 0 2 1292 180 0 0 0 chr17 92670994 92671014 -2601637 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 2 1292 1192 68 0 0 chr17 92671459 92671607 -2601044 + B1_Mus1 SINE Alu 1 148 0 2 1292 254 198 66 0 chr17 92671610 92671701 -2600950 + A-rich Low_complexity Low_complexity 2 98 0 2 1292 483 347 178 42 chr17 92672801 92673132 -2599519 + ORR1D2 LTR MaLR 1 376 -8 2 1292 5411 132 80 26 chr17 92673740 92675785 -2596866 + L1VL2 LINE L1 94 2340 -1275 2 1292 6453 182 52 28 chr17 92675786 92677767 -2594884 + L1_Mus3 LINE L1 4585 6634 -4 2 1292 4921 151 20 12 chr17 92677796 92678660 -2593991 + Lx LINE L1 5782 6652 -2 2 1292 21 36 0 0 chr17 92679124 92679152 -2593499 + AT_rich Low_complexity Low_complexity 1 28 0 2 1292 192 125 0 0 chr17 92679339 92679371 -2593280 + (TC)n Simple_repeat Simple_repeat 1 32 0 2 1292 24 32 0 0 chr17 92680138 92680169 -2592482 + AT_rich Low_complexity Low_complexity 1 31 0 2 1292 414 164 0 24 chr17 92680474 92680599 -2592052 + GA-rich Low_complexity Low_complexity 1 122 0 2 1292 543 69 0 0 chr17 92680879 92680951 -2591700 + (TG)n Simple_repeat Simple_repeat 1 72 0 2 1292 360 0 0 0 chr17 92681188 92681228 -2591423 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1292 521 244 22 22 chr17 92681294 92681428 -2591223 - B1_Mur4 SINE Alu -7 143 10 2 1292 233 196 54 0 chr17 92682384 92682440 -2590211 - ORR1B2 LTR MaLR -14 365 307 2 1292 288 0 0 0 chr17 92682477 92682509 -2590142 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 2 1292 263 333 0 0 chr17 92683570 92683639 -2589012 + B4A SINE B4 77 145 -147 2 1292 279 231 58 150 chr17 92683662 92683835 -2588816 + L1VL1 LINE L1 206 362 -6060 2 1292 14206 126 12 27 chr17 92683902 92686744 -2585907 + MusHAL1 LINE L1 558 3479 -2407 2 1292 222 62 0 0 chr17 92686744 92686776 -2585875 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 2 1292 14206 118 13 7 chr17 92686776 92686794 -2585857 + MusHAL1 LINE L1 3480 3508 -2378 2 1292 845 190 32 68 chr17 92686801 92687021 -2585630 + Lx3A LINE L1 6766 6977 -4 2 1292 1630 103 44 37 chr17 92688152 92688423 -2584228 - L1_Mus1 LINE L1 0 6567 6295 2 1292 2603 67 23 0 chr17 92688436 92688779 -2583872 + L1_Mus1 LINE L1 5654 6004 -563 2 1292 19846 181 52 27 chr17 92689250 92691760 -2580891 - L1_Mus1 LINE L1 -1771 5925 3441 2 1292 672 48 0 0 chr17 92691760 92691844 -2580807 + (TC)n Simple_repeat Simple_repeat 2 85 0 2 1292 19846 180 53 26 chr17 92691844 92693828 -2578823 - L1_Mus1 LINE L1 -2443 3440 1320 2 1292 3170 11 6 3 chr17 92693828 92694194 -2578457 + IAPLTR1_Mm LTR ERVK 1 367 0 2 1292 54894 23 17 15 chr17 92694194 92700655 -2571996 + IAPEz-int LTR ERVK 8 6481 0 2 1292 3180 8 6 3 chr17 92700655 92701021 -2571630 + IAPLTR1_Mm LTR ERVK 1 367 0 2 1292 3687 244 31 23 chr17 92701021 92701967 -2570684 - L1VL4 LINE L1 -5332 970 18 2 1292 478 286 45 8 chr17 92701979 92702113 -2570538 - ORR1B2 LTR MaLR -228 139 1 2 1292 353 282 38 59 chr17 92702151 92702187 -2570464 + L1_Mur3 LINE L1 1536 1573 -4307 2 1292 215 0 67 0 chr17 92702187 92702217 -2570434 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2 1292 353 282 38 59 chr17 92702217 92702417 -2570234 + L1_Mur3 LINE L1 1574 1767 -4113 2 1292 432 0 0 0 chr17 92702418 92702466 -2570185 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1292 4502 196 17 4 chr17 92702541 92703482 -2569169 - Lx2 LINE L1 -899 4978 4026 2 1292 4216 191 26 8 chr17 92703467 92704317 -2568334 + Lx2 LINE L1 5003 5863 -23 2 1292 299 44 22 0 chr17 92704317 92704362 -2568289 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 2 1292 3753 172 43 20 chr17 92704362 92704609 -2568042 + Lx2 LINE L1 5864 6129 -868 2 1292 942 174 50 11 chr17 92704609 92704789 -2567862 - B2_Mm2 SINE B2 -6 189 3 2 1292 3753 172 43 20 chr17 92704789 92705013 -2567638 + Lx2 LINE L1 6130 6342 -655 2 1292 923 39 31 0 chr17 92705023 92705152 -2567499 - L1Md_F3 LINE L1 -3 6581 6449 2 1292 2212 44 0 0 chr17 92705152 92705422 -2567229 + L1_Mm LINE L1 4741 5010 -873 2 1292 3627 164 12 20 chr17 92705416 92706061 -2566590 + Lx2 LINE L1 6331 6970 -27 2 1292 221 53 53 0 chr17 92706061 92706099 -2566552 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 2 1292 398 324 50 24 chr17 92706103 92706483 -2566168 + L1_Mur3 LINE L1 3193 3582 -2298 2 1292 283 321 74 42 chr17 92706832 92707275 -2565376 - L1_Mm LINE L1 -686 5605 5079 2 1292 247 337 0 21 chr17 92707770 92707864 -2564787 + Lx6 LINE L1 5617 5708 -1752 2 1292 1118 50 35 0 chr17 92707894 92708035 -2564616 - B1_Mus1 SINE Alu -1 147 2 2 1292 315 0 0 0 chr17 92708579 92708614 -2564037 + (T)n Simple_repeat Simple_repeat 1 35 0 2 1292 22 0 0 0 chr17 92709304 92709326 -2563325 + AT_rich Low_complexity Low_complexity 1 22 0 2 1292 1358 176 71 59 chr17 92710186 92710622 -2562029 + RMER17C LTR ERVK 19 439 -519 2 1292 1970 163 39 100 chr17 92710845 92711303 -2561348 + RLTR23 LTR ERV1 1 430 0 2 1292 1611 21 11 0 chr17 92711418 92711608 -2561043 + B2_Mm1a SINE B2 2 193 0 2 1292 30 0 0 0 chr17 92712045 92712075 -2560576 + AT_rich Low_complexity Low_complexity 1 30 0 2 1292 1997 155 0 0 chr17 92712340 92712649 -2560002 + RLTR27 LTR ERVK 1 309 0 2 1292 338 119 85 0 chr17 92712674 92712733 -2559918 + MMERVK10C-int LTR ERVK 204 267 -7314 2 1292 287 278 56 0 chr17 92712881 92712953 -2559698 + MMERVK10C-int LTR ERVK 6079 6154 -388 2 1292 1503 169 0 22 chr17 92713460 92713727 -2558924 + MMERVK10C-int LTR ERVK 7321 7581 0 2 1292 1961 146 3 0 chr17 92713727 92714035 -2558616 + RLTR27 LTR ERVK 1 309 0 2 1292 775 147 50 13 chr17 92714462 92714621 -2558030 - Lx LINE L1 -10 6644 6480 2 1292 1428 201 39 29 chr17 92714622 92714934 -2557717 + Lx2A1 LINE L1 6690 7004 -4 3 1292 3475 59 0 0 chr17 92715897 92716336 -2556315 - L1Md_A LINE L1 0 6582 6144 3 1292 18938 61 1 0 chr17 92716336 92718812 -2553839 + L1Md_F2 LINE L1 2470 4947 -936 3 1292 7772 57 1 2 chr17 92718812 92719795 -2552856 + L1Md_F2 LINE L1 5601 6582 0 3 1292 246 257 9 17 chr17 92719809 92719924 -2552727 + Lx9 LINE L1 7531 7644 0 3 1292 703 247 16 31 chr17 92720074 92720266 -2552385 - RMER19C LTR ERVK 0 611 423 3 1292 22771 85 145 14 chr17 92720280 92725065 -2547586 + L1Md_F LINE L1 184 5586 -297 3 1292 7952 52 0 10 chr17 92725065 92726071 -2546580 + L1Md_F2 LINE L1 5587 6582 0 3 1292 360 64 0 0 chr17 92726094 92726141 -2546510 + (A)n Simple_repeat Simple_repeat 1 47 0 3 1292 696 246 35 55 chr17 92726141 92726422 -2546229 - RMER19B LTR ERVK -256 646 308 3 1292 480 86 0 0 chr17 92726592 92726662 -2545989 + (TC)n Simple_repeat Simple_repeat 1 70 0 3 1292 1573 268 16 76 chr17 92727956 92728060 -2544591 - RLTR18B LTR ERVK -22 490 388 3 1292 1485 240 101 107 chr17 92728060 92728675 -2543976 - RMER19C LTR ERVK 0 611 1 3 1292 1573 268 16 76 chr17 92728675 92729054 -2543597 - RLTR18B LTR ERVK -125 387 36 3 1292 26 74 0 0 chr17 92729061 92729115 -2543536 + AT_rich Low_complexity Low_complexity 1 54 0 3 1292 518 331 203 6 chr17 92729533 92729898 -2542753 + Lx9 LINE L1 6318 6754 -890 3 1292 786 325 55 38 chr17 92730007 92730538 -2542113 + Lx9 LINE L1 6906 7445 -199 3 1292 21 36 0 0 chr17 92730540 92730568 -2542083 + AT_rich Low_complexity Low_complexity 1 28 0 3 1292 215 279 16 0 chr17 92730804 92730865 -2541786 + (CA)n Simple_repeat Simple_repeat 2 63 0 3 1292 1042 8 16 0 chr17 92730866 92730993 -2541658 + (TAGA)n Simple_repeat Simple_repeat 1 129 0 3 1292 2403 207 62 18 chr17 92731502 92732053 -2540598 - RLTR20B3 LTR ERVK 0 577 3 3 1292 180 111 0 0 chr17 92732177 92732204 -2540447 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1292 31 0 0 0 chr17 92733336 92733367 -2539284 + AT_rich Low_complexity Low_complexity 1 31 0 3 1292 261 0 0 0 chr17 92733842 92733871 -2538780 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 3 1292 786 133 8 25 chr17 92733871 92734023 -2538628 - B1_Mus2 SINE Alu -9 139 1 3 1292 351 33 49 16 chr17 92734026 92734087 -2538564 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 3 1292 252 352 115 32 chr17 92734715 92735053 -2537598 - MLT1C LTR MaLR -38 429 64 3 1292 289 289 83 125 chr17 92735247 92735583 -2537068 - MLT2C2 LTR ERVL -126 338 17 3 1292 498 46 0 0 chr17 92735997 92736062 -2536589 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 1292 452 358 31 5 chr17 92736248 92736439 -2536212 - MLT1C LTR MaLR -68 399 204 3 1292 221 118 0 19 chr17 92736898 92736950 -2535701 + (CAAAAA)n Simple_repeat Simple_repeat 3 53 0 3 1292 2116 68 0 0 chr17 92736953 92737219 -2535432 + RLTR44-int LTR ERVK 2547 2812 0 3 1292 3123 103 58 12 chr17 92737219 92737699 -2534952 + RLTR44C LTR ERVK 1 502 0 3 1292 262 318 94 0 chr17 92738031 92738116 -2534535 + PB1D10 SINE Alu 7 99 -18 3 1292 246 344 95 32 chr17 92738116 92738157 -2534494 + ID_B1 SINE B4 88 221 -3 3 1292 227 242 19 39 chr17 92739362 92739465 -2533186 - L1M2 LINE L1 -2348 3795 3695 3 1292 360 0 0 0 chr17 92739563 92739603 -2533048 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 1292 376 277 70 26 chr17 92739708 92739823 -2532828 - RMER12 LTR ERVK -61 1261 1142 3 1292 3617 242 102 11 chr17 92739981 92740164 -2532487 - RMER12 LTR ERVK -85 1237 1042 3 1292 315 0 0 0 chr17 92740164 92740199 -2532452 + (TC)n Simple_repeat Simple_repeat 1 35 0 3 1292 3617 242 102 11 chr17 92740199 92740413 -2532238 - RMER12 LTR ERVK -281 1041 770 3 1292 364 99 14 14 chr17 92740413 92740485 -2532166 + (TGGA)n Simple_repeat Simple_repeat 1 72 0 3 1292 3617 219 103 25 chr17 92740485 92741148 -2531503 - RMER12 LTR ERVK -553 769 80 3 1292 394 284 95 72 chr17 92741292 92742033 -2530618 + L1MA4A LINE L1 5059 5907 -396 3 1292 1755 221 104 20 chr17 92742256 92742452 -2530199 + RLTR20B3 LTR ERVK 1 196 -381 3 1292 821 59 17 0 chr17 92742452 92742571 -2530080 + (CAGAGA)n Simple_repeat Simple_repeat 2 122 0 3 1292 1755 221 104 20 chr17 92742571 92742827 -2529824 + RLTR20B3 LTR ERVK 197 490 -87 3 1292 1504 157 34 20 chr17 92742840 92743133 -2529518 - Lx3C LINE L1 -877 6099 5803 3 1292 6522 54 1 0 chr17 92743130 92744019 -2528632 + L1Md_F2 LINE L1 5055 5944 -638 3 1292 2762 175 8 2 chr17 92744014 92744490 -2528161 + L1Md_F2 LINE L1 277 755 -5861 3 1292 20875 74 2 0 chr17 92744490 92747267 -2525384 + L1Md_F2 LINE L1 2804 5585 -298 3 1292 7721 62 0 5 chr17 92747268 92748257 -2524394 + L1Md_F2 LINE L1 5587 6570 -12 3 1292 4932 61 1 48 chr17 92748285 92748972 -2523679 + L1Md_F2 LINE L1 5926 6580 -2 3 1292 3399 151 43 194 chr17 92748983 92750042 -2522609 - Lx3C LINE L1 -77 5809 4910 3 1292 750 225 92 50 chr17 92750047 92750291 -2522360 + RLTR20D LTR ERVK 56 322 -212 3 1292 486 0 0 0 chr17 92750337 92750391 -2522260 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 1292 489 271 40 69 chr17 92750580 92750782 -2521869 + RMER3D-int LTR ERVK 100 295 -2547 3 1292 904 231 7 55 chr17 92751271 92751564 -2521087 + RMER3D-int LTR ERVK 1103 1381 -1461 3 1292 2805 196 73 29 chr17 92751570 92752825 -2519826 + MYSERV16_I-int LTR ERVK 277 1713 -613 3 1292 4592 137 13 1 chr17 92752826 92753610 -2519041 - L1_Mur1 LINE L1 -1546 4340 3548 3 1292 438 346 58 32 chr17 92754264 92754452 -2518199 + B4A SINE B4 59 251 -41 3 1292 12405 83 6 1 chr17 92754454 92756202 -2516449 + L1Md_F2 LINE L1 1424 3179 -2704 3 1292 9498 85 4 0 chr17 92756200 92757499 -2515152 + L1Md_F2 LINE L1 4282 5585 -298 3 1292 7224 88 2 1 chr17 92757500 92758480 -2514171 + L1Md_F2 LINE L1 5587 6567 -15 3 1292 215 23 91 0 chr17 92759262 92759306 -2513345 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1292 422 0 0 36 chr17 92760569 92760624 -2512027 + (TTTA)n Simple_repeat Simple_repeat 4 56 0 3 1292 273 86 0 0 chr17 92760636 92760671 -2511980 + U2 snRNA snRNA 1 35 -153 3 1292 6168 219 40 17 chr17 92760676 92762082 -2510569 - Lx4A LINE L1 -11 7047 5610 3 1292 980 118 0 14 chr17 92762296 92762434 -2510217 + B1_Mm SINE Alu 1 136 -11 3 1292 371 366 127 15 chr17 92763464 92763802 -2508849 + Lx8 LINE L1 6640 7015 -458 3 1292 2278 193 66 22 chr17 92763798 92764706 -2507945 - Lx4A LINE L1 -568 6490 5487 3 1292 2513 200 40 17 chr17 92764724 92765249 -2507402 + Lx4A LINE L1 6522 7058 0 3 1292 300 83 0 0 chr17 92765254 92765302 -2507349 + (CCAA)n Simple_repeat Simple_repeat 4 51 0 3 1292 23 54 0 0 chr17 92765329 92765366 -2507285 + AT_rich Low_complexity Low_complexity 1 37 0 3 1292 445 343 29 19 chr17 92766028 92766233 -2506418 + B3 SINE B2 3 209 -7 3 1292 2281 109 25 6 chr17 92766952 92767313 -2505338 + RLTR9A LTR ERVK 1 368 0 3 1292 342 0 0 0 chr17 92767406 92767444 -2505207 + (TAGA)n Simple_repeat Simple_repeat 2 39 0 3 1292 303 175 0 0 chr17 92767445 92767508 -2505143 + (CATATA)n Simple_repeat Simple_repeat 1 63 0 3 1292 221 337 23 11 chr17 92768197 92768284 -2504367 - B3A SINE B2 -110 88 1 3 1292 23 0 0 0 chr17 92769370 92769393 -2503258 + AT_rich Low_complexity Low_complexity 1 23 0 3 1292 361 217 75 9 chr17 92769393 92769500 -2503151 - Lx4A LINE L1 -5 7053 6940 3 1292 937 63 0 0 chr17 92769884 92770011 -2502640 + B1_Mus1 SINE Alu 1 127 -21 3 1292 231 36 0 0 chr17 92770813 92770841 -2501810 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3 1292 22 35 0 0 chr17 92772766 92772795 -2499856 + AT_rich Low_complexity Low_complexity 1 29 0 3 1292 418 164 78 0 chr17 92772795 92772923 -2499728 - Lx9 LINE L1 0 7644 7507 3 1292 304 298 123 62 chr17 92773435 92773646 -2499005 + Lx8 LINE L1 7250 7473 0 3 1292 1936 47 4 0 chr17 92774085 92774319 -2498332 + L1Md_F2 LINE L1 5352 5586 -297 3 1292 7972 53 3 0 chr17 92774320 92775312 -2497339 + L1Md_F2 LINE L1 5588 6582 0 3 1292 1191 253 22 111 chr17 92775456 92775791 -2496860 - Lx7 LINE L1 0 7696 7380 3 1292 519 31 0 0 chr17 92775791 92775856 -2496795 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 1292 1191 253 22 111 chr17 92775856 92775874 -2496777 - Lx7 LINE L1 -317 7379 7379 3 1292 2926 74 19 0 chr17 92775874 92776252 -2496399 - IAPEY_LTR LTR ERVK 0 385 1 3 1292 1191 253 22 111 chr17 92776252 92776439 -2496212 - Lx7 LINE L1 -317 7379 7203 3 1292 1570 309 18 14 chr17 92777521 92777967 -2494684 + Lx6 LINE L1 6828 7275 -185 3 1292 284 70 0 23 chr17 92777967 92778011 -2494640 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 3 1292 180 152 0 0 chr17 92778197 92778230 -2494421 + T-rich Low_complexity Low_complexity 1 33 0 3 1292 378 0 0 0 chr17 92779580 92779622 -2493029 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1292 324 0 0 0 chr17 92779758 92779794 -2492857 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1292 313 219 16 0 chr17 92780110 92780149 -2492502 - RMER6A LTR ERVK 0 756 717 3 1292 1560 254 51 61 chr17 92780149 92780657 -2491994 + RLTR20B3 LTR ERVK 3 505 -72 3 1292 22 0 0 0 chr17 92780671 92780693 -2491958 + AT_rich Low_complexity Low_complexity 1 22 0 3 1292 674 169 89 18 chr17 92780695 92780864 -2491787 - RMER6A LTR ERVK -48 708 528 3 1292 27 0 0 0 chr17 92780864 92780891 -2491760 + AT_rich Low_complexity Low_complexity 1 27 0 3 1292 498 57 0 0 chr17 92781038 92781108 -2491543 + (CA)n Simple_repeat Simple_repeat 2 71 0 3 1292 2426 189 46 17 chr17 92781185 92781708 -2490943 - RMER6A LTR ERVK -215 541 4 3 1292 21 0 0 0 chr17 92781926 92781947 -2490704 + AT_rich Low_complexity Low_complexity 1 21 0 3 1292 1151 327 39 67 chr17 92782005 92782680 -2489971 - Lx8 LINE L1 -2 7471 6816 3 1292 21 0 0 0 chr17 92783346 92783367 -2489284 + AT_rich Low_complexity Low_complexity 1 21 0 3 1292 23 33 0 0 chr17 92783641 92783671 -2488980 + AT_rich Low_complexity Low_complexity 1 30 0 3 1292 897 284 54 56 chr17 92783905 92783954 -2488697 - MT2B LTR ERVL -2 599 550 3 1292 186 43 0 0 chr17 92783954 92783977 -2488674 + (TC)n Simple_repeat Simple_repeat 2 24 0 3 1292 180 0 0 0 chr17 92783977 92783996 -2488655 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 1292 897 250 118 32 chr17 92783996 92784379 -2488272 - MT2B LTR ERVL -52 549 1 3 1292 22 70 0 0 chr17 92784443 92784486 -2488165 + AT_rich Low_complexity Low_complexity 1 43 0 3 1292 261 203 53 17 chr17 92784866 92785167 -2487484 + (TAGA)n Simple_repeat Simple_repeat 1 312 0 3 1292 6519 82 3 1 chr17 92785636 92786498 -2486153 + L1_Mus2 LINE L1 5697 6560 -6 3 1292 8218 109 5 41 chr17 92786630 92788152 -2484499 - Lx3_Mus LINE L1 -992 6017 4563 3 1292 22930 106 126 13 chr17 92788192 92788356 -2484295 - L1_Mur1 LINE L1 -315 5571 5414 3 1292 720 0 0 0 chr17 92788356 92788436 -2484215 + (TTTTG)n Simple_repeat Simple_repeat 2 81 0 3 1292 1074 106 0 0 chr17 92788440 92788581 -2484070 - B1_Mm SINE Alu -6 141 1 4 1292 22930 123 123 16 chr17 92788581 92793049 -2479602 - L1_Mur1 LINE L1 -473 5413 46 3 1292 340 112 7 0 chr17 92793768 92793825 -2478826 + L1_Mus3 LINE L1 6462 6510 -128 4 1292 276 56 68 14 chr17 92795415 92795488 -2477163 + (TTTTG)n Simple_repeat Simple_repeat 4 80 0 4 1292 482 352 26 71 chr17 92795709 92796018 -2476633 + ORR1E-int LTR MaLR 740 1034 -336 4 1292 397 353 137 24 chr17 92796049 92796304 -2476347 + ORR1E LTR MaLR 68 351 -8 4 1292 600 290 155 29 chr17 92796705 92797992 -2474659 + L1_Mur3 LINE L1 2122 3570 -2310 4 1292 1321 204 38 17 chr17 92798213 92798502 -2474149 - Lx4A LINE L1 -3 7055 6761 4 1292 1076 165 66 9 chr17 92798511 92798737 -2473914 - L1_Mur2 LINE L1 -1121 4756 4518 4 161 6014 153 44 8 chr17 92798729 92799742 -2472909 + Lx2 LINE L1 5919 6970 -27 4 1293 3854 55 0 10 chr17 92799742 92800235 -2472416 + L1Md_F2 LINE L1 6087 6574 -8 4 1293 6014 153 44 8 chr17 92800235 92800262 -2472389 + Lx2 LINE L1 6971 6997 0 4 1293 235 131 48 16 chr17 92800272 92800290 -2472361 + A-rich Low_complexity Low_complexity 2 19 0 4 1293 1158 68 7 0 chr17 92800290 92800437 -2472214 + B1_Mus1 SINE Alu 1 148 0 4 1293 235 131 48 16 chr17 92800437 92800480 -2472171 + A-rich Low_complexity Low_complexity 20 64 0 4 1293 240 304 8 0 chr17 92800568 92800693 -2471958 + L1_Mur1 LINE L1 4262 4387 -1499 4 1293 599 253 59 0 chr17 92800903 92801073 -2471578 + Lx6 LINE L1 7275 7454 -6 4 1293 410 198 15 22 chr17 92801144 92801278 -2471373 + Lx9 LINE L1 7511 7643 -1 4 1293 1036 82 0 0 chr17 92801832 92801966 -2470685 + B1_Mus1 SINE Alu 4 137 -11 4 1293 205 27 26 51 chr17 92801966 92802005 -2470646 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 4 1293 201 74 0 0 chr17 92802038 92802065 -2470586 + (TC)n Simple_repeat Simple_repeat 1 27 0 4 1293 450 0 0 0 chr17 92802066 92802116 -2470535 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1293 210 71 0 0 chr17 92802357 92802385 -2470266 + (CAA)n Simple_repeat Simple_repeat 2 29 0 4 1293 210 37 0 0 chr17 92802423 92802450 -2470201 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1293 7984 48 2 3 chr17 92802454 92803822 -2468829 - L1Md_F2 LINE L1 0 6582 5273 4 1293 219 69 0 0 chr17 92803847 92803876 -2468775 + (CAA)n Simple_repeat Simple_repeat 1 29 0 4 1293 23 0 0 0 chr17 92803908 92803931 -2468720 + AT_rich Low_complexity Low_complexity 1 23 0 4 1293 323 181 43 43 chr17 92804624 92804763 -2467888 + (TAGA)n Simple_repeat Simple_repeat 2 140 0 4 1293 1447 137 9 0 chr17 92806382 92806608 -2466043 + RLTR19B LTR ERVK 1 228 -487 4 1293 1492 185 52 26 chr17 92806588 92806893 -2465758 + RLTR19B LTR ERVK 403 715 0 4 1293 182 411 26 35 chr17 92806966 92807082 -2465569 - L2b LINE L2 -33 3342 3228 4 1293 811 133 0 23 chr17 92808829 92808960 -2463691 + MurSatRep1 Unknown Unknown 613 740 -1397 4 1293 390 194 0 0 chr17 92808956 92809023 -2463628 + MurSatRep1 Unknown Unknown 943 1009 -1128 4 1293 323 280 33 18 chr17 92809174 92809488 -2463163 + MMSAT4 Satellite Satellite 1 318 0 4 1293 3557 197 32 11 chr17 92809547 92810209 -2462442 - RLTR17 LTR ERVK 0 692 17 4 1293 288 347 26 5 chr17 92810209 92810403 -2462248 + MurSatRep1 Unknown Unknown 1851 2048 -89 4 1293 1217 99 32 16 chr17 92810441 92810626 -2462025 - B2_Mm2 SINE B2 -4 191 4 4 1293 243 347 0 0 chr17 92810674 92810798 -2461853 + MMSAT4 Satellite Satellite 45 168 0 4 1293 259 363 14 9 chr17 92811006 92811223 -2461428 + MurSatRep1 Unknown Unknown 1832 2049 -88 4 1293 251 350 0 0 chr17 92811160 92811303 -2461348 + MMSAT4 Satellite Satellite 26 168 0 4 1293 255 317 16 0 chr17 92811404 92811527 -2461124 + MMSAT4 Satellite Satellite 44 168 0 4 1293 250 332 45 20 chr17 92811414 92811614 -2461037 + MurSatRep1 Unknown Unknown 1845 2049 -88 4 1293 37 23 0 0 chr17 92811668 92811712 -2460939 + AT_rich Low_complexity Low_complexity 1 44 0 4 1293 331 335 14 14 chr17 92811757 92811975 -2460676 + MurSatRep1 Unknown Unknown 1832 2049 -88 4 1293 366 304 11 11 chr17 92812152 92812353 -2460298 + MMSAT4 Satellite Satellite 1 201 0 4 1293 916 282 93 21 chr17 92812625 92812915 -2459736 - ORR1D2 LTR MaLR 0 370 60 4 1293 636 307 7 0 chr17 92813712 92813865 -2458786 - RSINE1 SINE B4 -2 163 10 4 1293 306 0 0 0 chr17 92814007 92814041 -2458610 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 4 1293 208 237 0 0 chr17 92814041 92814079 -2458572 + polypyrimidine Low_complexity Low_complexity 2 39 0 4 1293 185 122 0 47 chr17 92814779 92814822 -2457829 + CT-rich Low_complexity Low_complexity 2 42 0 4 1293 219 36 0 0 chr17 92815157 92815185 -2457466 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 4 1293 2157 225 38 41 chr17 92815281 92815867 -2456784 - RLTR31_Mm LTR ERVK 0 583 10 4 1293 3240 204 27 53 chr17 92815868 92816759 -2455892 - RMER3D-int LTR ERVK -45 2797 1930 4 1293 2205 152 15 32 chr17 92816809 92817289 -2455362 + RMER17B LTR ERVK 405 902 -4 4 1293 2791 123 48 8 chr17 92818137 92818614 -2454037 - Lx3A LINE L1 -722 6259 5764 4 1293 1105 147 29 5 chr17 92818612 92818817 -2453834 - Lx3A LINE L1 -853 6128 5919 4 1293 4048 116 106 1 chr17 92818825 92819474 -2453177 + Lx3A LINE L1 6265 6981 0 4 1293 3486 162 32 8 chr17 92819842 92820459 -2452192 - Lx3A LINE L1 -6 6975 6344 4 1293 265 174 14 14 chr17 92820463 92820533 -2452118 + T-rich Low_complexity Low_complexity 1 70 0 4 1293 4292 174 13 37 chr17 92820533 92821577 -2451074 - Lx2 LINE L1 -11 6986 6028 4 1293 10179 28 0 0 chr17 92821574 92823425 -2449226 - L1Md_T LINE L1 0 6582 4732 4 1293 22538 20 0 0 chr17 92823428 92826754 -2445897 - L1Md_A LINE L1 0 6582 3257 4 1293 2830 101 46 4 chr17 92826732 92827264 -2445387 - Lx3A LINE L1 -910 6063 5517 4 1293 1093 178 167 47 chr17 92827995 92828360 -2444291 + RLTR9E LTR ERVK 1 409 0 4 1293 354 23 0 0 chr17 92828515 92828558 -2444093 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1293 2401 235 22 9 chr17 92828633 92829187 -2443464 - Lx3C LINE L1 0 7000 6440 4 1293 6611 129 8 15 chr17 92829685 92830925 -2441726 - Lx3C LINE L1 -908 6068 4839 4 1293 1495 295 114 11 chr17 92831007 92831774 -2440877 - Lx7 LINE L1 -543 7153 6284 4 1293 1040 267 44 26 chr17 92831781 92831890 -2440761 - Lx7 LINE L1 -1540 6156 6047 4 1293 384 103 0 0 chr17 92831890 92831948 -2440703 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 1293 1040 267 44 26 chr17 92831948 92831965 -2440686 - Lx7 LINE L1 -1650 6046 6032 4 1293 971 114 6 0 chr17 92831965 92832131 -2440520 + (CA)n Simple_repeat Simple_repeat 2 168 0 4 1293 1040 267 44 26 chr17 92832131 92832457 -2440194 - Lx7 LINE L1 -1665 6031 5695 4 1293 1589 250 48 46 chr17 92832457 92832872 -2439779 + MTC LTR MaLR 6 421 0 4 1293 5661 65 1 3 chr17 92833016 92833751 -2438900 + L1Md_F2 LINE L1 5847 6580 -2 4 1293 2623 189 24 30 chr17 92833942 92834481 -2438170 - RLTR21 LTR ERVK -884 688 153 4 1293 1887 19 0 0 chr17 92834481 92834696 -2437955 + L1Md_T LINE L1 5372 5586 -297 4 1293 8489 32 0 0 chr17 92834696 92835692 -2436959 + L1Md_T LINE L1 5587 6582 0 4 1293 4269 95 3 11 chr17 92835695 92836310 -2436341 + L1Md_F2 LINE L1 5963 6572 -10 4 1293 864 219 11 40 chr17 92836311 92836487 -2436164 - RLTR21 LTR ERVK -1396 176 6 4 1293 4309 56 29 5 chr17 92836603 92837164 -2435487 + L1Md_F2 LINE L1 5013 5586 -297 4 1293 7693 33 50 0 chr17 92837165 92838105 -2434546 + L1Md_F2 LINE L1 5588 6574 -8 4 1293 226 264 88 62 chr17 92838107 92838220 -2434431 - MER34 LTR ERV1 -418 124 9 4 1293 26 0 0 0 chr17 92838327 92838353 -2434298 + AT_rich Low_complexity Low_complexity 1 26 0 4 1293 21 0 0 0 chr17 92838383 92838404 -2434247 + AT_rich Low_complexity Low_complexity 1 21 0 4 1293 230 208 0 0 chr17 92838465 92838513 -2434138 + LTR84b LTR ERVL 69 116 -645 4 1293 1064 181 22 32 chr17 92839564 92839818 -2432833 + L1VL2 LINE L1 284 624 -5711 4 1293 5549 162 25 34 chr17 92839818 92841647 -2431004 + Lx LINE L1 4814 6642 -12 4 1293 279 0 0 0 chr17 92841647 92841678 -2430973 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 4 1293 26 50 0 0 chr17 92841799 92841839 -2430812 + AT_rich Low_complexity Low_complexity 1 40 0 4 1293 1300 313 82 48 chr17 92843985 92844461 -2428190 - Lx5 LINE L1 -5 7045 6554 4 1293 2378 181 16 5 chr17 92844526 92844971 -2427680 + L1_Mur2 LINE L1 5342 5791 -86 4 1293 187 247 69 69 chr17 92845112 92845199 -2427452 - L3 LINE CR1 -1997 2492 2406 4 1293 2974 220 112 17 chr17 92845828 92846887 -2425764 + Lx8 LINE L1 901 2049 -3828 4 1293 501 17 0 0 chr17 92846887 92846945 -2425706 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 1293 2974 223 61 10 chr17 92846945 92847026 -2425625 + Lx8 LINE L1 2050 2146 -3731 4 1293 396 190 0 0 chr17 92847027 92847106 -2425545 + A-rich Low_complexity Low_complexity 1 79 0 4 1293 2101 176 18 5 chr17 92847124 92847518 -2425133 + Lx2 LINE L1 6599 6997 0 4 1293 6634 160 64 33 chr17 92847525 92848963 -2423688 + Lx8 LINE L1 4217 5710 -1763 4 1293 1265 119 5 0 chr17 92849754 92849947 -2422704 - B2_Mm2 SINE B2 -1 194 1 4 1293 837 142 0 0 chr17 92850459 92850628 -2422023 + (TC)n Simple_repeat Simple_repeat 1 169 0 4 1293 346 311 64 69 chr17 92851176 92851349 -2421302 - L1M2 LINE L1 -1085 5058 4887 4 1293 4812 189 45 63 chr17 92851494 92851706 -2420945 - RLTR25A LTR ERVK -10 1093 883 4 1293 423 68 0 0 chr17 92851706 92851765 -2420886 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1293 4812 189 45 63 chr17 92851765 92852665 -2419986 - RLTR25A LTR ERVK -221 882 1 4 1293 180 93 111 0 chr17 92852749 92852803 -2419848 + (GTTTG)n Simple_repeat Simple_repeat 5 64 0 4 1293 308 253 92 128 chr17 92852817 92853121 -2419530 - L1M2 LINE L1 -1437 4706 4414 4 1293 2743 123 73 47 chr17 92853153 92853602 -2419049 - LTRIS4 LTR ERV1 0 507 47 4 1293 3330 64 32 121 chr17 92853602 92854172 -2418479 + MURVY-LTR LTR ERV1 1 519 0 4 1293 2743 123 73 47 chr17 92854172 92854216 -2418435 - LTRIS4 LTR ERV1 -461 46 1 4 1293 287 441 0 0 chr17 92854806 92854917 -2417734 + PB1D10 SINE Alu 2 112 -5 4 1293 423 0 0 0 chr17 92855453 92855500 -2417151 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 1293 1852 134 13 22 chr17 92855738 92856050 -2416601 - RLTR27 LTR ERVK 0 309 1 4 1293 1453 169 4 23 chr17 92856050 92856316 -2416335 - MMERVK10C-int LTR ERVK 0 7581 7321 4 1293 889 321 38 43 chr17 92856450 92857032 -2415619 - MMERVK10C-int LTR ERVK -512 7069 6491 4 1293 2623 295 73 49 chr17 92857148 92858930 -2413721 - MMERVK10C-int LTR ERVK -2104 5477 3653 4 1293 546 340 61 32 chr17 92858999 92859494 -2413157 - IAP-d-int LTR ERVK -5330 1212 704 4 1293 219 294 27 18 chr17 92859795 92859906 -2412745 + T-rich Low_complexity Low_complexity 4 115 0 4 1293 343 109 91 0 chr17 92860122 92860177 -2412474 - IAP-d-int LTR ERVK -7314 267 208 4 1293 2076 121 7 0 chr17 92860200 92860505 -2412146 - RLTR27 LTR ERVK 0 309 3 4 1293 213 115 58 0 chr17 92860756 92860808 -2411843 + (TATAA)n Simple_repeat Simple_repeat 3 57 0 4 1293 1103 62 7 7 chr17 92861061 92861207 -2411444 - B1_Mus2 SINE Alu -1 146 1 4 1293 1408 85 5 0 chr17 92861279 92861468 -2411183 + B2_Mm1t SINE B2 3 192 -1 4 1293 21 36 0 0 chr17 92861717 92861745 -2410906 + AT_rich Low_complexity Low_complexity 1 28 0 5 1293 756 235 29 88 chr17 92862211 92862449 -2410202 - Lx6 LINE L1 0 7460 7237 5 1293 4926 142 63 91 chr17 92862454 92862914 -2409737 - RLTR22_Mur LTR ERVK 0 1848 1341 5 1293 423 0 0 0 chr17 92862914 92862961 -2409690 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1293 4926 166 62 95 chr17 92862961 92863716 -2408935 - RLTR22_Mur LTR ERVK -508 1340 736 5 1293 23 54 0 0 chr17 92864149 92864186 -2408465 + AT_rich Low_complexity Low_complexity 1 37 0 5 1293 384 349 60 8 chr17 92864699 92864832 -2407819 + MLT1D LTR MaLR 248 387 -118 5 1293 690 279 75 84 chr17 92864904 92865327 -2407324 - MLT1E3 LTR MaLR -157 496 29 5 1293 250 253 12 0 chr17 92865465 92865548 -2407103 - L1MB8 LINE L1 -26 6152 6069 5 1293 274 291 81 37 chr17 92865674 92865970 -2406681 - L1MB8 LINE L1 -166 6012 5704 5 1293 246 254 0 0 chr17 92865987 92866042 -2406609 - MTE2b LTR MaLR -324 55 1 5 1293 23 68 0 0 chr17 92866084 92866128 -2406523 + AT_rich Low_complexity Low_complexity 1 44 0 5 1293 213 72 70 23 chr17 92866437 92866480 -2406171 + T-rich Low_complexity Low_complexity 3 47 0 5 1293 934 221 139 91 chr17 92866480 92866974 -2405677 + MT2B LTR ERVL 19 594 -7 5 1293 778 230 0 0 chr17 92866996 92867144 -2405507 + B3 SINE B2 3 150 -66 5 1293 37711 43 0 4 chr17 92867178 92873348 -2399303 - L1Md_T LINE L1 -2 6583 343 5 1293 376 291 53 21 chr17 92873348 92873501 -2399150 - MTD LTR MaLR -17 402 260 5 1293 201 94 0 0 chr17 92873880 92873912 -2398739 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 5 1293 830 300 79 21 chr17 92874064 92874343 -2398308 - MTD LTR MaLR -115 304 10 5 1293 267 31 0 0 chr17 92874345 92874377 -2398274 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 1293 432 0 0 0 chr17 92874832 92874880 -2397771 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1293 461 306 71 0 chr17 92875429 92875481 -2397170 - B3 SINE B2 -16 200 139 5 1293 409 17 17 17 chr17 92875481 92875540 -2397111 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 5 1293 461 306 71 0 chr17 92875540 92875670 -2396981 - B3 SINE B2 -78 138 6 5 1293 1321 231 18 71 chr17 92875692 92876084 -2396567 - RMER1B Other Other -17 1049 679 5 1293 506 91 55 0 chr17 92876114 92876224 -2396427 + (TTTG)n Simple_repeat Simple_repeat 1 116 0 5 1293 417 86 0 0 chr17 92876871 92876929 -2395722 + (CAAAA)n Simple_repeat Simple_repeat 5 62 0 5 1293 231 133 0 0 chr17 92876928 92876973 -2395678 + (CCAA)n Simple_repeat Simple_repeat 3 47 0 5 1293 351 0 0 0 chr17 92877448 92877487 -2395164 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 5 1293 828 238 37 16 chr17 92877857 92878040 -2394611 + ORR1C1 LTR MaLR 62 248 -119 5 1293 1716 136 196 0 chr17 92878040 92878408 -2394243 - RLTR47_MM LTR ERV1 0 532 93 5 1293 9680 112 8 3 chr17 92878408 92879856 -2392795 - L1_Mm LINE L1 -653 5230 3777 5 1293 1234 62 11 33 chr17 92879856 92880040 -2392611 + L1_Mus1 LINE L1 6388 6567 0 5 1293 453 148 188 0 chr17 92880042 92880143 -2392508 - RLTR47_MM LTR ERV1 -412 120 1 5 1293 677 207 14 22 chr17 92880143 92880279 -2392372 + ORR1C1 LTR MaLR 233 367 0 5 1293 607 222 103 49 chr17 92880279 92880464 -2392187 + ORR1C1-int LTR MaLR 2 196 -1313 5 1293 1867 118 36 13 chr17 92880631 92880940 -2391711 - L1_Mus4 LINE L1 0 6636 6321 5 1293 3472 110 0 0 chr17 92880940 92881431 -2391220 - L1_Mus4 LINE L1 -470 6166 5676 5 1293 11229 162 41 13 chr17 92881428 92883693 -2388958 - L1_Mm LINE L1 -1179 4704 2377 5 1293 1603 251 81 2 chr17 92883983 92884390 -2388261 + ORR1C1-int LTR MaLR 179 617 -892 5 1293 1438 155 4 0 chr17 92884398 92884637 -2388014 - L1_Mm LINE L1 -307 5576 5337 5 1293 4260 123 9 3 chr17 92884638 92885284 -2387367 + L1_Mus3 LINE L1 5980 6629 -9 5 1293 4700 193 21 17 chr17 92885318 92886272 -2386379 + RMER17B LTR ERVK 1 958 0 5 1293 395 246 104 9 chr17 92886280 92886395 -2386256 + B1_Mm SINE Alu 22 147 0 5 1293 864 251 20 28 chr17 92886319 92886573 -2386078 + ORR1C1-int LTR MaLR 714 965 -544 5 1293 1008 198 79 114 chr17 92886558 92886838 -2385813 + ORR1C1 LTR MaLR 109 378 0 5 1293 351 0 0 0 chr17 92888024 92888063 -2384588 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 1293 243 0 0 0 chr17 92888392 92888419 -2384232 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1293 387 0 0 0 chr17 92888419 92888461 -2384190 + (GA)n Simple_repeat Simple_repeat 2 44 0 5 1293 663 13 0 0 chr17 92890085 92890161 -2382490 + (TG)n Simple_repeat Simple_repeat 1 76 0 5 1293 22 0 0 0 chr17 92890161 92890183 -2382468 + GC_rich Low_complexity Low_complexity 1 22 0 5 1293 364 91 25 25 chr17 92890187 92890266 -2382385 + (CAGAGA)n Simple_repeat Simple_repeat 6 84 0 5 1293 601 300 20 20 chr17 92890790 92890943 -2381708 + B4A SINE B4 132 284 -8 5 1293 6311 106 73 36 chr17 92892546 92893289 -2379362 - L1_Mus3 LINE L1 -1 6637 5842 5 1293 1094 50 35 0 chr17 92893289 92893430 -2379221 + B1_Mm SINE Alu 2 147 0 5 1293 9515 125 17 19 chr17 92893430 92894934 -2377717 - L1_Mus3 LINE L1 -797 5841 4366 5 1293 198 0 0 0 chr17 92894934 92894956 -2377695 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 1293 9515 129 5 15 chr17 92894956 92894995 -2377656 - L1_Mus3 LINE L1 -1518 4365 4327 5 1293 314 68 0 0 chr17 92894995 92895039 -2377612 + MusHAL1 LINE L1 1731 1774 -938 5 1293 435 38 0 0 chr17 92895096 92895149 -2377502 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1293 475 16 15 15 chr17 92895149 92895213 -2377438 + (GA)n Simple_repeat Simple_repeat 2 66 0 5 1293 2641 109 15 2 chr17 92895218 92895613 -2377038 - MTB LTR MaLR 0 400 1 5 1293 1113 79 0 0 chr17 92895713 92895853 -2376798 + B1_Mus1 SINE Alu 2 141 -7 5 1293 26 0 0 0 chr17 92895853 92895879 -2376772 + AT_rich Low_complexity Low_complexity 1 26 0 5 1293 264 261 0 0 chr17 92896634 92896703 -2375948 - L1VL4 LINE L1 -5820 482 414 5 1293 24 0 0 0 chr17 92896896 92896920 -2375731 + AT_rich Low_complexity Low_complexity 1 24 0 5 1293 430 329 138 50 chr17 92897034 92897758 -2374893 - L1MC LINE L1 -2803 3343 2579 5 1293 981 201 92 20 chr17 92898175 92898424 -2374227 + L1VL4 LINE L1 521 787 -5515 5 1293 987 236 108 42 chr17 92898418 92898851 -2373800 + MusHAL1 LINE L1 1 462 -2250 5 1293 456 111 0 0 chr17 92898851 92898923 -2373728 + (TC)n Simple_repeat Simple_repeat 2 73 0 5 1293 266 0 0 29 chr17 92899022 92899057 -2373594 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 5 1293 262 0 0 50 chr17 92899059 92899099 -2373552 - B1_Mus2 SINE Alu 0 147 110 5 1293 22 0 0 0 chr17 92899442 92899464 -2373187 + AT_rich Low_complexity Low_complexity 1 22 0 5 1293 700 292 68 26 chr17 92900039 92900303 -2372348 - Lx6 LINE L1 -17 7443 7169 5 1293 1331 252 79 77 chr17 92900326 92900375 -2372276 - RLTR20B3 LTR ERVK -42 535 485 5 1293 435 38 0 0 chr17 92900375 92900428 -2372223 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1293 1331 252 79 77 chr17 92900428 92900711 -2371940 - RLTR20B3 LTR ERVK -93 484 198 5 1293 812 89 0 8 chr17 92900711 92900835 -2371816 + (TCC)n Simple_repeat Simple_repeat 1 123 0 5 1293 1331 252 79 77 chr17 92900835 92901031 -2371620 - RLTR20B3 LTR ERVK -380 197 7 5 1293 1334 236 157 45 chr17 92901052 92901536 -2371115 - Lx6 LINE L1 -298 7162 6625 5 1293 241 94 57 0 chr17 92901536 92901589 -2371062 + (CAAA)n Simple_repeat Simple_repeat 3 58 0 5 1293 1042 122 0 7 chr17 92902352 92902501 -2370150 - B1_Mus1 SINE Alu 0 148 1 5 1293 207 167 0 0 chr17 92902556 92902598 -2370053 + CT-rich Low_complexity Low_complexity 3 44 0 5 1293 413 216 53 46 chr17 92903139 92903270 -2369381 - RMER1B Other Other 0 1066 935 5 1293 268 191 88 0 chr17 92903432 92903500 -2369151 + RLTR19-int LTR ERVK 799 872 -5265 5 1293 357 252 91 95 chr17 92904196 92904428 -2368223 + MTC-int LTR MaLR 908 1138 -120 5 1293 750 297 28 9 chr17 92904598 92904812 -2367839 + URR1A DNA MER1_type 8 225 -1 5 1293 2739 255 39 30 chr17 92905036 92905877 -2366774 + RLTR19-int LTR ERVK 2342 3190 -2947 5 1293 673 190 30 12 chr17 92906076 92906241 -2366410 + RLTR19-int LTR ERVK 3529 3696 -2441 5 1293 28 61 0 0 chr17 92906474 92906523 -2366128 + AT_rich Low_complexity Low_complexity 1 49 0 5 1293 21 0 0 0 chr17 92906606 92906627 -2366024 + AT_rich Low_complexity Low_complexity 1 21 0 5 1293 5304 15 0 0 chr17 92906720 92907321 -2365330 + L1Md_A LINE L1 5982 6582 0 5 1293 3791 80 0 8 chr17 92907532 92908039 -2364612 + L1Md_F2 LINE L1 6069 6571 -11 5 1293 23 0 0 0 chr17 92908197 92908220 -2364431 + AT_rich Low_complexity Low_complexity 1 23 0 5 1293 2693 217 5 37 chr17 92908920 92909510 -2363141 + L1VL1 LINE L1 214 784 -5638 5 1293 5660 55 6 1 chr17 92909501 92910503 -2362148 - L1Md_F2 LINE L1 -284 6298 5294 5 1293 3714 159 45 65 chr17 92910498 92911456 -2361195 + L1Md_A LINE L1 442 1376 -4507 5 1293 420 249 53 0 chr17 92911449 92911574 -2361077 + Lx9 LINE L1 6932 7049 -595 5 1293 1438 189 7 14 chr17 92911717 92912007 -2360644 + Lx4A LINE L1 6769 7056 -2 5 1293 270 136 0 0 chr17 92912012 92912056 -2360595 + (GGA)n Simple_repeat Simple_repeat 3 46 0 5 1293 207 0 0 0 chr17 92912056 92912079 -2360572 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 1293 229 329 0 0 chr17 92913740 92913810 -2358841 + GA-rich Low_complexity Low_complexity 3 72 0 5 1293 834 314 134 21 chr17 92914358 92914738 -2357913 - Lx5 LINE L1 -18 7032 6610 5 1293 896 174 335 26 chr17 92914741 92914934 -2357717 - RMER17C LTR ERVK 0 410 220 5 1293 874 61 24 35 chr17 92914934 92915103 -2357548 + (CAGAGA)n Simple_repeat Simple_repeat 2 168 0 5 1293 896 174 335 26 chr17 92915103 92915222 -2357429 - RMER17C LTR ERVK -191 219 2 5 1293 338 291 114 21 chr17 92915694 92915887 -2356764 - L1MCa LINE L1 -4860 1891 1681 5 1293 1154 75 0 0 chr17 92915894 92916040 -2356611 + B1_Mus2 SINE Alu 1 146 -1 5 1293 348 16 0 0 chr17 92916113 92916175 -2356476 + (TTTC)n Simple_repeat Simple_repeat 1 62 0 5 1293 959 157 0 6 chr17 92916168 92916348 -2356303 + CT-rich Low_complexity Low_complexity 2 180 0 5 1293 40494 15 1 6 chr17 92916353 92922708 -2349943 - L1Md_A LINE L1 -1 6581 261 5 1293 835 314 52 0 chr17 92923085 92923314 -2349337 - MTD LTR MaLR -161 258 18 5 1293 1963 211 25 47 chr17 92923361 92923805 -2348846 + RLTR11A LTR ERVK 3 436 -92 5 1293 359 21 21 0 chr17 92923840 92923888 -2348763 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1293 491 333 35 0 chr17 92923889 92924030 -2348621 - B3A SINE B2 -44 154 9 5 1293 799 301 111 42 chr17 92924151 92924629 -2348022 - RMER5 LTR ERV1 0 534 24 5 1293 241 321 109 68 chr17 92924676 92925208 -2347443 - L1MCa LINE L1 -5205 840 287 5 1293 244 186 34 0 chr17 92925228 92925287 -2347364 + (TTTG)n Simple_repeat Simple_repeat 4 64 0 5 1293 1319 59 0 12 chr17 92927472 92927644 -2345007 - L1Md_F2 LINE L1 -317 6265 6096 5 1293 740 21 0 0 chr17 92927644 92927740 -2344911 + L1Md_T LINE L1 6487 6582 0 5 1293 2924 55 23 8 chr17 92928342 92928730 -2343921 + L1Md_F3 LINE L1 6191 6584 0 6 1293 735 359 38 7 chr17 92929305 92929597 -2343054 - MTE2b LTR MaLR -6 373 73 6 1293 226 347 53 0 chr17 92929610 92929705 -2342946 - MTE2b LTR MaLR -279 100 1 6 161 1648 262 111 7 chr17 92929718 92930160 -2342491 + RLTR16 LTR ERVK 6 493 -12 6 1294 22 35 0 0 chr17 92930280 92930309 -2342342 + AT_rich Low_complexity Low_complexity 1 29 0 6 1294 1097 226 102 69 chr17 92930531 92930664 -2341987 + ORR1D1 LTR MaLR 1 126 -248 6 1294 974 194 37 0 chr17 92930664 92930880 -2341771 - URR1B DNA MER1_type 0 225 2 6 1294 1097 226 102 69 chr17 92930880 92931108 -2341543 + ORR1D1 LTR MaLR 127 374 0 6 1294 31 0 0 0 chr17 92931224 92931255 -2341396 + AT_rich Low_complexity Low_complexity 1 31 0 6 1294 22 0 0 0 chr17 92932327 92932349 -2340302 + AT_rich Low_complexity Low_complexity 1 22 0 6 1294 17673 170 34 10 chr17 92932419 92934129 -2338522 - Lx2 LINE L1 0 6997 5235 6 1294 296 65 0 42 chr17 92934129 92934177 -2338474 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 6 1294 17673 188 94 13 chr17 92934177 92936481 -2336170 - Lx2 LINE L1 -649 5234 2616 6 1294 537 16 0 0 chr17 92936481 92936543 -2336108 + (CA)n Simple_repeat Simple_repeat 1 62 0 6 1294 447 19 0 0 chr17 92936543 92936594 -2336057 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 1294 17673 174 58 56 chr17 92936594 92938749 -2333902 - Lx2 LINE L1 -3268 2615 550 6 1294 23 0 0 0 chr17 92939181 92939204 -2333447 + AT_rich Low_complexity Low_complexity 1 23 0 6 1294 26 50 0 0 chr17 92939322 92939362 -2333289 + AT_rich Low_complexity Low_complexity 1 40 0 6 1294 2427 270 62 16 chr17 92940420 92941048 -2331603 + RMER13A LTR ERVK 204 860 0 6 1294 807 294 26 17 chr17 92941092 92941324 -2331327 + Lx5 LINE L1 6816 7049 -1 6 1294 3490 210 49 7 chr17 92941396 92942388 -2330263 + Lx5 LINE L1 4996 6335 -723 6 1294 278 50 25 0 chr17 92942390 92942430 -2330221 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 6 1294 303 274 122 91 chr17 92942433 92942630 -2330021 + Lx5 LINE L1 6848 7050 0 6 1294 942 96 7 0 chr17 92943042 92943178 -2329473 - L1_Mus2 LINE L1 0 6566 6430 6 1294 933 255 0 0 chr17 92943629 92943845 -2328806 - URR1B DNA MER1_type 0 225 10 6 1294 1544 254 119 58 chr17 92944284 92944754 -2327897 + Lx7 LINE L1 6322 6808 -888 6 1294 689 43 11 0 chr17 92944754 92944847 -2327804 + (TC)n Simple_repeat Simple_repeat 1 94 0 6 1294 1544 254 119 58 chr17 92944847 92944895 -2327756 + Lx7 LINE L1 6809 6871 -825 6 1294 896 234 37 5 chr17 92944899 92945114 -2327537 + RLTR16 LTR ERVK 1 222 -283 6 1294 269 250 27 14 chr17 92945361 92945434 -2327217 - ORR1C2 LTR MaLR -2 382 309 6 1294 252 0 0 0 chr17 92945436 92945464 -2327187 + (TA)n Simple_repeat Simple_repeat 1 28 0 6 1294 334 141 11 23 chr17 92945929 92946016 -2326635 + (CAA)n Simple_repeat Simple_repeat 2 87 0 6 1294 210 71 0 0 chr17 92947140 92947168 -2325483 + (CTTA)n Simple_repeat Simple_repeat 2 29 0 6 1294 296 226 32 0 chr17 92947223 92947285 -2325366 - MTEb LTR MaLR -19 400 337 6 1294 1105 83 0 7 chr17 92947463 92947609 -2325042 + B1_Mus1 SINE Alu 2 146 -2 6 1294 276 30 0 0 chr17 92947616 92947649 -2325002 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 6 1294 1117 308 16 51 chr17 92947856 92948229 -2324422 - MTEb LTR MaLR -18 361 2 6 1294 768 264 103 41 chr17 92948616 92948908 -2323743 + RLTR20C LTR ERVK 1 310 -224 6 1294 545 269 12 43 chr17 92948904 92949067 -2323584 + RLTR20C LTR ERVK 421 578 0 6 1294 516 261 51 22 chr17 92949390 92949512 -2323139 + B1_Mus2 SINE Alu 9 137 -13 6 1294 245 29 29 0 chr17 92949512 92949546 -2323105 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1294 513 261 51 22 chr17 92949546 92949560 -2323091 + B1_Mur4 SINE Alu 138 149 -1 6 1294 2341 201 72 82 chr17 92950333 92951112 -2321539 - L1_Mus1 LINE L1 0 6567 5797 6 1294 3998 73 11 15 chr17 92951112 92951656 -2320995 + L1_Mus1 LINE L1 6023 6564 -3 6 1294 252 0 0 0 chr17 92951799 92951827 -2320824 + (TTG)n Simple_repeat Simple_repeat 2 29 0 6 1294 250 281 10 73 chr17 92951833 92951929 -2320722 - Lx8 LINE L1 -1045 6428 6339 6 1294 397 234 186 21 chr17 92952757 92952897 -2319754 + MER67D LTR ERV1 15 177 -337 6 1294 804 113 40 0 chr17 92952970 92953120 -2319531 + GA-rich Low_complexity Low_complexity 3 158 0 6 1294 699 326 81 21 chr17 92953152 92953437 -2319214 - ORR1D2 LTR MaLR -68 302 1 6 1294 2689 312 76 81 chr17 92953449 92954788 -2317863 - ORR1D2-int LTR MaLR -26 1344 12 6 1294 649 333 113 18 chr17 92954851 92955187 -2317464 - ORR1D2 LTR MaLR -2 368 1 6 1294 329 367 36 0 chr17 92955187 92955325 -2317326 + MER67D LTR ERV1 305 447 -214 6 1294 7281 70 5 4 chr17 92955411 92956372 -2316279 + L1Md_F2 LINE L1 5607 6568 -14 6 1294 341 22 22 0 chr17 92956468 92956514 -2316137 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 6 1294 360 0 0 0 chr17 92957446 92957486 -2315165 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 6 1294 201 167 36 18 chr17 92957530 92957585 -2315066 + (TA)n Simple_repeat Simple_repeat 1 56 0 6 1294 25 31 0 0 chr17 92957738 92957770 -2314881 + AT_rich Low_complexity Low_complexity 1 32 0 6 1294 487 234 36 42 chr17 92958258 92958423 -2314228 - RLTR43A LTR ERVK 0 364 201 6 1294 1973 219 22 17 chr17 92958603 92959012 -2313639 - ETnERV2-int LTR ERVK -348 7058 6648 6 1294 419 310 19 19 chr17 92959250 92959411 -2313240 - RodERV21-int LTR ERV1 -428 4563 4403 6 1294 372 248 43 43 chr17 92960884 92961048 -2311603 - RLTR43A LTR ERVK 0 364 201 6 1294 21 57 0 0 chr17 92961436 92961471 -2311180 + AT_rich Low_complexity Low_complexity 1 35 0 6 1294 577 293 66 41 chr17 92962221 92962463 -2310188 + RLTR14 LTR ERV1 3 250 -132 6 1294 402 21 0 0 chr17 92963482 92963529 -2309122 + (TG)n Simple_repeat Simple_repeat 1 47 0 6 1294 3069 32 34 0 chr17 92966757 92967135 -2305516 - L1Md_T LINE L1 -1 6581 6191 6 1294 399 306 33 75 chr17 92967297 92967632 -2305019 + MYSERV6-int LTR ERVK 5496 5816 -3143 6 1294 3018 101 13 28 chr17 92969027 92969038 -2303613 - L1Md_F2 LINE L1 -11 6571 6561 6 1294 240 35 0 0 chr17 92969038 92969067 -2303584 + (TTA)n Simple_repeat Simple_repeat 2 30 0 6 1294 3018 101 13 28 chr17 92969067 92969525 -2303126 - L1Md_F2 LINE L1 -22 6560 6109 6 1294 2872 84 8 2 chr17 92971013 92971406 -2301245 + MTA_Mm LTR MaLR 2 396 0 6 1294 2816 222 27 63 chr17 92972118 92972629 -2300022 + L1_Mur1 LINE L1 3 870 -6114 6 1294 3352 28 5 0 chr17 92972629 92973023 -2299628 + MTA_Mm LTR MaLR 1 396 0 6 1294 2816 142 26 17 chr17 92973023 92973455 -2299196 + L1_Mur1 LINE L1 813 1315 -5669 6 1294 23042 110 45 8 chr17 92973447 92975069 -2297582 + L1_Mur1 LINE L1 2035 3761 -2125 6 1294 1035 99 0 0 chr17 92975069 92975210 -2297441 + B1_Mus1 SINE Alu 2 142 -6 6 1294 195 0 56 28 chr17 92975214 92975250 -2297401 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 6 1294 23042 110 45 8 chr17 92975250 92975330 -2297321 + L1_Mur1 LINE L1 3762 3835 -2051 6 1294 417 39 0 0 chr17 92975330 92975381 -2297270 + (TA)n Simple_repeat Simple_repeat 2 52 0 6 1294 23042 110 45 8 chr17 92975381 92976701 -2295950 + L1_Mur1 LINE L1 3836 5193 -693 6 1294 252 0 0 0 chr17 92976701 92976729 -2295922 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 6 1294 23042 110 45 8 chr17 92976729 92977412 -2295239 + L1_Mur1 LINE L1 5194 5884 -2 6 1294 2496 151 57 57 chr17 92977432 92977838 -2294813 + RMER17D2 LTR ERVK 1 427 -382 6 1294 972 138 0 0 chr17 92977838 92978005 -2294646 + (TC)n Simple_repeat Simple_repeat 2 168 0 6 1294 2496 151 57 57 chr17 92978005 92978105 -2294546 + RMER17D2 LTR ERVK 428 507 -302 6 1294 4275 87 7 28 chr17 92978107 92978723 -2293928 + L1Md_F2 LINE L1 5980 6582 0 6 1294 1380 169 92 4 chr17 92978731 92978992 -2293659 + RMER17D2 LTR ERVK 526 809 0 6 1294 5960 152 37 15 chr17 92979012 92980069 -2292582 + Lx3_Mus LINE L1 5908 6987 -22 6 1294 564 29 0 0 chr17 92980069 92980139 -2292512 + (TA)n Simple_repeat Simple_repeat 1 70 0 6 1294 5960 152 37 15 chr17 92980139 92980159 -2292492 + Lx3_Mus LINE L1 6988 7008 -1 6 1294 1165 137 99 0 chr17 92980860 92981072 -2291579 + L1_Mus3 LINE L1 6405 6637 -1 6 1294 972 145 7 0 chr17 92982761 92982906 -2289745 - B1_Mus1 SINE Alu 0 148 3 6 1294 1024 121 19 0 chr17 92983421 92983578 -2289073 - L1_Mus4 LINE L1 -564 6072 5913 6 1294 1139 54 0 7 chr17 92983576 92983725 -2288926 - Lx LINE L1 -842 5812 5665 6 1294 2115 137 22 11 chr17 92983725 92984094 -2288557 + Lx LINE L1 6276 6648 -6 6 1294 241 342 33 8 chr17 92984111 92984232 -2288419 - L1MD LINE L1 -1957 4189 4066 6 1294 240 35 0 0 chr17 92984339 92984368 -2288283 + (TC)n Simple_repeat Simple_repeat 1 29 0 6 1294 205 200 20 20 chr17 92984379 92984430 -2288221 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1294 1843 116 10 7 chr17 92985242 92985536 -2287115 + L1_Mus3 LINE L1 6338 6632 -6 6 1294 26 0 0 0 chr17 92985910 92985936 -2286715 + AT_rich Low_complexity Low_complexity 1 26 0 6 1294 384 260 48 39 chr17 92986630 92986734 -2285917 - B3A SINE B2 -92 106 2 6 1294 3726 93 6 4 chr17 92986755 92987285 -2285366 + L1_Mus3 LINE L1 6102 6632 -6 6 1294 227 288 24 24 chr17 92987968 92988050 -2284601 - RMER15 LTR ERVL -154 421 340 6 1294 22 0 0 0 chr17 92988118 92988140 -2284511 + AT_rich Low_complexity Low_complexity 1 22 0 6 1294 1880 219 15 0 chr17 92989213 92989606 -2283045 + Lx4B LINE L1 5340 5738 -139 6 1294 773 146 0 7 chr17 92989606 92989744 -2282907 + GA-rich Low_complexity Low_complexity 3 139 0 6 1294 4733 239 85 13 chr17 92989751 92990978 -2281673 + Lx4B LINE L1 5782 7050 -8 6 1294 455 305 76 23 chr17 92991237 92991408 -2281243 + B3 SINE B2 8 187 -29 6 1294 246 315 14 0 chr17 92991497 92991570 -2281081 + URR1B DNA MER1_type 6 79 -146 6 1294 25877 153 30 7 chr17 92991574 92997645 -2275006 + L1_Mus3 LINE L1 410 6632 -6 6 1294 678 182 14 27 chr17 92997682 92997829 -2274822 + URR1B DNA MER1_type 80 224 -1 6 1294 192 77 0 0 chr17 92998091 92998117 -2274534 + (TTG)n Simple_repeat Simple_repeat 2 27 0 6 1294 288 77 0 0 chr17 92998115 92998154 -2274497 + (T)n Simple_repeat Simple_repeat 1 39 0 6 1294 947 112 7 20 chr17 92998154 92998165 -2274486 - B1_Mus1 SINE Alu 0 148 140 6 1294 215 61 0 29 chr17 92998165 92998199 -2274452 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 6 1294 947 112 7 20 chr17 92998199 92998333 -2274318 - B1_Mus1 SINE Alu -9 139 5 6 1294 663 205 130 36 chr17 92999146 92999431 -2273220 + RMER6B LTR ERVK 67 449 -12 6 1294 277 222 16 0 chr17 93000048 93000111 -2272540 + L1MDb LINE L1 1004 1067 -5342 1 1294 26 50 0 0 chr17 93000111 93000151 -2272500 + AT_rich Low_complexity Low_complexity 1 40 0 2 1294 204 40 0 0 chr17 93000226 93000251 -2272400 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1294 21 57 0 0 chr17 93000253 93000288 -2272363 + AT_rich Low_complexity Low_complexity 1 35 0 4 1294 306 98 0 0 chr17 93000921 93000972 -2271679 + (T)n Simple_repeat Simple_repeat 1 51 0 5 1294 605 226 105 0 chr17 93001828 93001961 -2270690 + B1_Mur4 SINE Alu 4 150 0 6 1294 1452 34 0 0 chr17 93001983 93002215 -2270436 + (GAA)n Simple_repeat Simple_repeat 1 232 0 7 1294 211 205 0 37 chr17 93002223 93002304 -2270347 + A-rich Low_complexity Low_complexity 3 80 0 8 1294 4153 220 31 8 chr17 93002546 93003577 -2269074 - L1_Mur2 LINE L1 -1364 4513 3459 9 1294 1756 208 26 13 chr17 93003575 93003965 -2268686 + L1_Mur2 LINE L1 4629 5023 -854 9 1294 797 206 14 152 chr17 93003965 93004182 -2268469 - RLTR26 LTR ERVK 0 642 456 1 1294 2429 225 70 20 chr17 93004182 93004727 -2267924 - RMER19B LTR ERVK -330 572 1 1 1294 381 149 0 0 chr17 93004818 93004885 -2267766 + (TCC)n Simple_repeat Simple_repeat 1 67 0 1 1294 341 379 15 0 chr17 93004908 93005040 -2267611 - RMER13A LTR ERVK -12 896 763 1 1294 2141 271 108 2 chr17 93005174 93005739 -2266912 - RMER13A LTR ERVK -193 667 43 1 1294 4775 192 45 2 chr17 93006139 93007088 -2265563 - L1_Mm LINE L1 -197 5686 4697 1 1294 2415 229 100 71 chr17 93007088 93007956 -2264695 - RLTR13D6 LTR ERVK 0 902 10 1 1294 7430 199 214 49 chr17 93007969 93009163 -2263488 - L1_Mur1 LINE L1 -1181 4705 3494 1 1294 206 32 32 0 chr17 93009163 93009194 -2263457 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1 1294 7430 199 214 49 chr17 93009194 93009465 -2263186 - L1_Mur1 LINE L1 -2393 3493 3164 1 1294 2927 61 200 9 chr17 93009465 93009895 -2262756 + RLTR1B LTR ERV1 1 512 0 1 1294 7430 199 214 49 chr17 93009895 93011012 -2261639 - L1_Mur1 LINE L1 -2723 3163 1694 1 1294 37487 50 3 7 chr17 93011006 93016981 -2255670 - L1Md_F2 LINE L1 -2 6580 631 1 1294 3402 191 28 37 chr17 93016981 93018329 -2254322 - L1VL2 LINE L1 -2197 1418 109 2 1294 234 62 0 0 chr17 93018330 93018362 -2254289 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 1294 1543 135 137 29 chr17 93019008 93019314 -2253337 - Lx LINE L1 0 6654 6316 2 1294 2813 158 15 4 chr17 93019584 93020104 -2252547 + L1_Mur3 LINE L1 3657 4182 -1698 2 1294 3035 124 6 0 chr17 93020099 93020591 -2252060 + L1_Mm LINE L1 1677 2171 -3712 2 1294 1796 184 20 54 chr17 93020584 93021123 -2251528 - L1_Mur3 LINE L1 -2332 3548 3028 2 1294 258 81 0 0 chr17 93021138 93021175 -2251476 + (TC)n Simple_repeat Simple_repeat 2 38 0 2 1294 5074 76 0 6 chr17 93021188 93021861 -2250790 - L1Md_F2 LINE L1 -14 6568 5900 2 1294 2475 70 0 0 chr17 93021869 93022182 -2250469 + L1Md_F2 LINE L1 5587 5899 -683 2 1294 2120 249 41 78 chr17 93022184 93023104 -2249547 - L1_Mur3 LINE L1 -2873 3007 2122 2 1294 396 0 0 0 chr17 93023117 93023161 -2249490 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 1294 336 83 0 0 chr17 93023161 93023208 -2249443 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1294 1318 239 55 50 chr17 93024987 93025348 -2247303 - ORR1D1 LTR MaLR -8 366 4 3 1294 3466 230 43 46 chr17 93026736 93027643 -2245008 + RMER13B LTR ERVK 1 904 -4 3 1294 1375 171 8 0 chr17 93027791 93028043 -2244608 - L1_Mur1 LINE L1 -1083 4803 4550 3 1294 26 0 0 0 chr17 93028044 93028070 -2244581 + AT_rich Low_complexity Low_complexity 1 26 0 3 1294 25 31 0 0 chr17 93028112 93028144 -2244507 + AT_rich Low_complexity Low_complexity 1 32 0 3 1294 2445 93 0 0 chr17 93028145 93028478 -2244173 - L1_Mus1 LINE L1 -1 6566 6234 3 1294 207 0 0 0 chr17 93029098 93029121 -2243530 + (TC)n Simple_repeat Simple_repeat 2 24 0 3 1294 486 49 0 0 chr17 93029121 93029181 -2243470 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 1294 21 0 0 0 chr17 93029387 93029408 -2243243 + AT_rich Low_complexity Low_complexity 1 21 0 3 1294 479 45 15 0 chr17 93031512 93031578 -2241073 + (TC)n Simple_repeat Simple_repeat 1 67 0 3 1294 1213 274 13 13 chr17 93031578 93031888 -2240763 - Lx5 LINE L1 -12 7038 6729 4 1294 1558 201 110 2 chr17 93032114 93032260 -2240391 + MYSERV16_I-int LTR ERVK 1352 1524 -802 4 1294 198 0 0 0 chr17 93032260 93032282 -2240369 + (TA)n Simple_repeat Simple_repeat 2 23 0 4 1294 1558 201 110 2 chr17 93032282 93032535 -2240116 + MYSERV16_I-int LTR ERVK 1525 1794 -532 4 1294 1230 98 0 11 chr17 93032978 93033164 -2239487 - L1Md_F2 LINE L1 -12 6570 6387 4 1294 1107 100 82 0 chr17 93033164 93033334 -2239317 + B2_Mm1t SINE B2 5 188 -5 4 1294 24 77 0 0 chr17 93034193 93034245 -2238406 + AT_rich Low_complexity Low_complexity 1 52 0 4 1294 40 87 0 0 chr17 93034348 93034451 -2238200 + AT_rich Low_complexity Low_complexity 1 103 0 4 1294 307 314 59 42 chr17 93034603 93034842 -2237809 + HAL1 LINE L1 1950 2192 -315 4 1294 252 302 32 56 chr17 93035181 93035307 -2237344 + L1MCa LINE L1 3 125 -6383 4 1294 324 334 116 67 chr17 93035367 93035535 -2237116 + L1MCa LINE L1 224 390 -6118 4 1294 303 49 0 0 chr17 93035535 93035576 -2237075 + (CTA)n Simple_repeat Simple_repeat 1 41 0 4 1294 324 334 116 67 chr17 93035576 93035779 -2236872 + L1MCa LINE L1 391 613 -5895 4 1294 351 349 59 73 chr17 93035845 93036049 -2236602 - LTR31 LTR ERV1 -17 602 402 5 1294 225 62 0 0 chr17 93036499 93036531 -2236120 + B1_Mm SINE Alu 115 146 -1 5 1294 243 122 0 0 chr17 93036532 93036581 -2236070 + (CAAA)n Simple_repeat Simple_repeat 1 49 0 5 1294 589 304 57 0 chr17 93036622 93036780 -2235871 + B4A SINE B4 118 284 -8 5 1294 6795 95 33 2 chr17 93037362 93038637 -2234014 + L1_Mus2 LINE L1 5252 6560 -6 5 1294 26 30 0 0 chr17 93038743 93038776 -2233875 + AT_rich Low_complexity Low_complexity 1 33 0 5 1294 729 107 207 0 chr17 93039307 93039428 -2233223 + B1_Mus1 SINE Alu 2 147 -1 5 1294 1885 293 101 17 chr17 93039967 93040629 -2232022 - Lx6 LINE L1 -3 7457 6740 5 1294 8599 121 28 9 chr17 93040626 93042149 -2230502 - Lx3_Mus LINE L1 0 7009 5458 5 1294 3559 97 2 4 chr17 93042139 93042657 -2229994 + Lx3_Mus LINE L1 4939 5455 -431 5 1294 1553 253 24 3 chr17 93042684 93042695 -2229956 - Lx6 LINE L1 -708 6752 6742 5 1294 492 18 0 0 chr17 93042695 93042752 -2229899 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 1294 1553 253 24 3 chr17 93042752 93043113 -2229538 - Lx6 LINE L1 -719 6741 6373 5 1294 634 11 53 0 chr17 93043382 93043477 -2229174 + (GA)n Simple_repeat Simple_repeat 1 100 0 6 1294 25 51 0 0 chr17 93043525 93043564 -2229087 + AT_rich Low_complexity Low_complexity 1 39 0 6 1294 6639 71 1 1 chr17 93043564 93044415 -2228236 - L1_Mus1 LINE L1 -2 6565 5715 6 1294 324 64 0 0 chr17 93045185 93045232 -2227419 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1294 3093 223 71 29 chr17 93045315 93045759 -2226892 + L1_Mur2 LINE L1 165 602 -6110 6 1294 3695 243 29 21 chr17 93045759 93046612 -2226039 - RMER13A LTR ERVK 0 860 1 6 1294 3093 223 71 29 chr17 93046612 93046937 -2225714 + L1_Mur2 LINE L1 603 967 -5745 6 1294 2377 87 89 8 chr17 93046919 93047278 -2225373 + L1_Mm LINE L1 4865 5252 -631 6 1294 514 308 19 37 chr17 93047784 93047946 -2224705 + RSINE1 SINE B4 3 161 -4 6 1294 431 18 18 0 chr17 93048176 93048232 -2224419 + (TTTTG)n Simple_repeat Simple_repeat 2 58 0 6 1294 212 133 22 22 chr17 93048767 93048813 -2223838 + T-rich Low_complexity Low_complexity 4 49 0 6 1294 599 243 22 50 chr17 93049116 93049298 -2223353 + RMER10A LTR ERVL 264 440 -2 7 1294 3703 98 6 2 chr17 93049645 93050167 -2222484 + L1_Mus3 LINE L1 6113 6636 -2 7 1294 307 359 64 45 chr17 93050349 93050769 -2221882 - MuLV-int LTR ERV1 -3156 4450 4023 7 1294 24 0 0 0 chr17 93051383 93051407 -2221244 + AT_rich Low_complexity Low_complexity 1 24 0 7 1294 206 0 0 65 chr17 93052006 93052037 -2220614 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 7 1294 4036 260 24 36 chr17 93052138 93053199 -2219452 - RodERV21-int LTR ERV1 -2278 2713 1666 7 1294 677 125 18 18 chr17 93053199 93053313 -2219338 + L1_Mus2 LINE L1 6172 6285 -281 7 1294 2132 164 22 56 chr17 93053642 93054087 -2218564 - Lx LINE L1 -17 6637 6208 7 1294 21 0 0 0 chr17 93054728 93054749 -2217902 + AT_rich Low_complexity Low_complexity 1 21 0 7 1294 2492 37 0 0 chr17 93056324 93056621 -2216030 - L1Md_T LINE L1 -1 6581 6285 7 1294 2345 19 0 0 chr17 93056622 93056887 -2215764 + L1Md_T LINE L1 6019 6283 -299 7 1294 189 74 0 0 chr17 93057192 93057219 -2215432 + (TCTG)n Simple_repeat Simple_repeat 3 29 0 8 1294 345 158 0 0 chr17 93057221 93057303 -2215348 + CT-rich Low_complexity Low_complexity 1 82 0 8 1294 248 247 61 12 chr17 93057728 93057810 -2214841 - LTR40b LTR ERVL -1 461 376 8 1294 390 314 30 59 chr17 93057823 93057992 -2214659 + RSINE1 SINE B4 2 165 0 8 1294 229 188 42 0 chr17 93058055 93058103 -2214548 + A-rich Low_complexity Low_complexity 1 50 0 8 1294 357 82 0 0 chr17 93058715 93058764 -2213887 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 8 1294 242 210 0 0 chr17 93059399 93059461 -2213190 + T-rich Low_complexity Low_complexity 1 62 0 8 1294 393 58 0 0 chr17 93059538 93059590 -2213061 + (TG)n Simple_repeat Simple_repeat 1 52 0 8 1294 22 106 0 0 chr17 93060478 93060563 -2212088 + AT_rich Low_complexity Low_complexity 1 85 0 8 161 1367 87 16 0 chr17 93061034 93061219 -2211432 + B2_Mm2 SINE B2 2 189 -6 8 1295 350 369 59 48 chr17 93061220 93061493 -2211158 + LTR52 LTR ERVL 143 418 -3 9 1295 29 94 0 0 chr17 93062484 93062569 -2210082 + AT_rich Low_complexity Low_complexity 1 85 0 9 1295 387 0 0 0 chr17 93062995 93063038 -2209613 + (CA)n Simple_repeat Simple_repeat 2 44 0 9 1295 703 359 80 3 chr17 93063792 93064169 -2208482 - Lx8 LINE L1 -466 7007 6602 9 1295 641 304 44 24 chr17 93064378 93064584 -2208067 + RMER15 LTR ERVL 276 485 -90 9 1295 1667 222 46 0 chr17 93064585 93064932 -2207719 + ORR1C1 LTR MaLR 1 363 -15 9 1295 275 276 20 169 chr17 93064857 93065005 -2207646 + RMER15 LTR ERVL 434 559 -16 9 1295 1358 6 17 6 chr17 93065448 93065620 -2207031 + (TG)n Simple_repeat Simple_repeat 1 174 0 9 1295 676 316 11 5 chr17 93065955 93066143 -2206508 - ORR1D2 LTR MaLR -181 189 1 9 1295 6510 115 15 39 chr17 93067205 93067870 -2204781 + MusHAL1 LINE L1 1607 2280 -432 9 1295 318 26 0 0 chr17 93067870 93067909 -2204742 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1295 6546 35 0 0 chr17 93067917 93068691 -2203960 + L1Md_T LINE L1 5808 6581 -1 1 1295 6510 115 15 39 chr17 93068691 93069144 -2203507 + MusHAL1 LINE L1 2281 2707 -5 9 1295 861 261 37 4 chr17 93070124 93070397 -2202254 - L1_Mur2 LINE L1 -661 5216 4935 1 1295 2652 226 19 47 chr17 93070377 93071189 -2201462 - L1_Mur2 LINE L1 -2034 3843 3058 1 1295 659 12 12 0 chr17 93071189 93071269 -2201382 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 1 1295 2652 226 19 47 chr17 93071269 93071303 -2201348 - L1_Mur2 LINE L1 -2820 3057 3023 1 1295 287 333 0 0 chr17 93071534 93071636 -2201015 + (CA)n Simple_repeat Simple_repeat 1 102 0 1 1295 1531 336 99 27 chr17 93072691 93073630 -2199021 + Lx8 LINE L1 6242 7226 -247 1 1295 198 0 0 0 chr17 93073630 93073652 -2198999 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1 1295 1531 336 99 27 chr17 93073652 93073838 -2198813 + Lx8 LINE L1 7227 7447 -26 1 1295 3193 203 28 3 chr17 93074203 93074817 -2197834 + RLTR17 LTR ERVK 10 638 -54 1 1295 225 0 0 0 chr17 93074840 93074865 -2197786 + (TTG)n Simple_repeat Simple_repeat 3 27 0 1 1295 454 313 14 125 chr17 93074895 93075103 -2197548 - B3 SINE B2 -30 186 2 1 1295 2771 180 25 27 chr17 93075412 93076025 -2196626 + Lx3B LINE L1 3 975 -6009 1 1295 10666 147 329 25 chr17 93076040 93076202 -2196449 + Lx3B LINE L1 1909 2080 -3806 1 1295 234 0 0 0 chr17 93076202 93076228 -2196423 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 1295 10666 147 329 25 chr17 93076228 93077146 -2195505 + Lx3B LINE L1 2081 3017 -2869 1 1295 4364 10 0 0 chr17 93077146 93077635 -2195016 - L1Md_A LINE L1 0 6582 6094 1 1295 10666 147 329 25 chr17 93077635 93078518 -2194133 + Lx3B LINE L1 3018 4813 -1073 1 1295 363 23 0 0 chr17 93078518 93078562 -2194089 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1295 10666 152 176 31 chr17 93078562 93080719 -2191932 + Lx3B LINE L1 4814 6970 -3 1 1295 459 0 0 0 chr17 93081211 93081262 -2191389 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1295 5715 242 19 15 chr17 93082378 93083766 -2188885 - Lx5 LINE L1 0 7050 5658 1 1295 720 175 0 0 chr17 93083763 93083883 -2188768 + Lx5 LINE L1 5545 5664 -213 1 1295 1274 87 38 5 chr17 93085014 93085200 -2187451 + B2_Mm2 SINE B2 1 192 -3 1 1295 525 335 55 6 chr17 93086841 93087024 -2185627 + B3A SINE B2 2 193 -5 1 1295 1960 226 25 28 chr17 93087490 93088077 -2184574 - Lx LINE L1 0 6997 6100 1 1295 19122 195 56 40 chr17 93088103 93089308 -2183343 - L1VL4 LINE L1 0 5886 4643 1 1295 1052 122 12 0 chr17 93089308 93089480 -2183171 + (TTTC)n Simple_repeat Simple_repeat 3 176 0 1 1295 19122 195 56 40 chr17 93089480 93089511 -2183140 - L1VL4 LINE L1 -1244 4642 4604 1 1295 279 0 0 0 chr17 93089511 93089542 -2183109 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1295 1033 110 7 0 chr17 93089552 93089698 -2182953 - B1_Mm SINE Alu 0 147 1 1 1295 19122 195 56 40 chr17 93089698 93091497 -2181154 - L1VL4 LINE L1 -1283 4603 2894 1 1295 1245 62 0 0 chr17 93091497 93091673 -2180978 + (TC)n Simple_repeat Simple_repeat 1 176 0 1 1295 19122 195 56 40 chr17 93091673 93092483 -2180168 - L1VL4 LINE L1 -2993 2893 2083 1 1295 1132 81 0 0 chr17 93092483 93092631 -2180020 - B1_Mus1 SINE Alu 0 148 1 1 1295 19122 165 70 34 chr17 93092631 93094179 -2178472 - L1VL4 LINE L1 -3804 2082 360 1 1295 180 0 0 0 chr17 93094189 93094209 -2178442 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1295 1654 264 156 27 chr17 93094240 93094836 -2177815 - RMER1A Other Other -2 1028 356 1 1295 1349 202 158 10 chr17 93094841 93095151 -2177500 - ORR1B1 LTR MaLR 0 394 39 1 1295 37877 31 0 0 chr17 93095179 93101626 -2171025 - L1Md_T LINE L1 0 6585 66 1 1295 351 0 0 0 chr17 93101746 93101785 -2170866 + (T)n Simple_repeat Simple_repeat 1 39 0 1 1295 2406 150 145 13 chr17 93101902 93102468 -2170183 - Lx2 LINE L1 -351 6646 6024 1 1295 732 23 0 0 chr17 93103306 93103392 -2169259 + (TC)n Simple_repeat Simple_repeat 2 87 0 1 1295 222 37 0 0 chr17 93103392 93103418 -2169233 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1295 353 390 45 8 chr17 93103700 93103966 -2168685 - Lx8 LINE L1 -419 7054 6779 1 1295 225 412 39 6 chr17 93104031 93104209 -2168442 - Lx8 LINE L1 -817 6656 6473 1 1295 260 192 12 60 chr17 93104340 93104423 -2168228 - L1_Mur2 LINE L1 -2184 3693 3615 1 1295 1038 281 108 9 chr17 93104545 93104868 -2167783 - L1VL2 LINE L1 -5842 493 139 1 1295 333 309 27 54 chr17 93104873 93105058 -2167593 - L1M2 LINE L1 -887 5256 5077 1 1295 207 0 0 0 chr17 93105083 93105106 -2167545 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 1295 397 227 40 60 chr17 93105112 93105262 -2167389 - L1_Rod LINE L1 -925 4952 4798 1 1295 181 235 13 128 chr17 93106151 93106229 -2166422 - L3 LINE CR1 -3462 1027 959 1 1295 712 212 32 44 chr17 93106370 93106528 -2166123 - Lx5 LINE L1 -759 6291 6136 1 1295 28 0 0 0 chr17 93106847 93106875 -2165776 + AT_rich Low_complexity Low_complexity 1 28 0 1 1295 198 0 0 0 chr17 93107569 93107591 -2165060 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1 1295 306 73 0 0 chr17 93107597 93107638 -2165013 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1 1295 2282 134 35 138 chr17 93108535 93108714 -2163937 + L1_Mus2 LINE L1 5448 5637 -246 1 1295 234 0 0 0 chr17 93108714 93108740 -2163911 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 1 1295 2282 134 35 138 chr17 93108740 93108791 -2163860 + L1_Mus2 LINE L1 5638 5638 -245 1 1295 1086 103 0 0 chr17 93108791 93108937 -2163714 - B1_Mus2 SINE Alu -1 146 1 1 1295 6670 90 19 2 chr17 93108937 93109858 -2162793 + L1_Mus2 LINE L1 5631 6565 -1 1 1295 619 93 0 0 chr17 93111293 93111390 -2161261 - L1_Mus2 LINE L1 -1 6565 6469 1 1295 25 31 0 0 chr17 93112081 93112113 -2160538 + AT_rich Low_complexity Low_complexity 1 32 0 1 1295 1308 272 20 68 chr17 93112616 93112967 -2159684 - ORR1C1 LTR MaLR 0 378 45 1 1295 3436 60 0 30 chr17 93113459 93113488 -2159163 - L1Md_F2 LINE L1 0 6582 6561 1 1295 2303 96 196 2 chr17 93113488 93113886 -2158765 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1295 3436 60 0 30 chr17 93113886 93114324 -2158327 - L1Md_F2 LINE L1 -22 6560 6129 1 1295 27 73 0 0 chr17 93114681 93114736 -2157915 + AT_rich Low_complexity Low_complexity 1 55 0 1 1295 7276 81 6 8 chr17 93114736 93115396 -2157255 - L1_Mus1 LINE L1 -1 6566 5911 1 1295 1502 139 83 187 chr17 93115396 93115926 -2156725 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1295 7276 89 6 5 chr17 93115926 93116479 -2156172 - L1_Mus1 LINE L1 -657 5910 5355 1 1295 4503 119 28 6 chr17 93116475 93117194 -2155457 + L1_Mm LINE L1 3903 4637 -1246 1 1295 198 0 0 0 chr17 93117201 93117223 -2155428 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 1295 1183 179 0 0 chr17 93118417 93118624 -2154027 - Lx4B LINE L1 -526 6532 6326 1 1295 302 366 107 0 chr17 93118693 93118805 -2153846 - B4A SINE B4 -163 129 6 1 1295 506 346 21 32 chr17 93118855 93119043 -2153608 - B4 SINE B4 0 292 107 1 1295 23 33 0 0 chr17 93119065 93119095 -2153556 + AT_rich Low_complexity Low_complexity 1 30 0 1 1295 261 250 15 45 chr17 93119111 93119178 -2153473 - B3 SINE B2 -27 189 125 1 1295 302 189 14 0 chr17 93119214 93119227 -2153424 + polypurine Low_complexity Low_complexity 2 15 0 1 1295 1356 62 0 0 chr17 93119227 93119406 -2153245 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 1 1295 302 189 14 0 chr17 93119406 93119466 -2153185 + GA-rich Low_complexity Low_complexity 16 75 0 1 1295 11200 188 24 7 chr17 93119959 93122970 -2149681 - Lx LINE L1 -7 6647 3586 1 1295 2338 155 55 71 chr17 93122973 93123536 -2149115 + MusHAL1 LINE L1 1802 2355 -357 1 1295 348 94 0 0 chr17 93124680 93124733 -2147918 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 1295 2958 208 92 33 chr17 93124749 93125144 -2147507 + Lx6 LINE L1 3125 3541 -2339 1 1295 677 91 209 0 chr17 93125144 93125254 -2147397 + B1_Mus2 SINE Alu 1 133 -14 1 1295 180 0 0 0 chr17 93125257 93125277 -2147374 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1 1295 2958 208 92 33 chr17 93125277 93125766 -2146885 + Lx6 LINE L1 3542 4066 -1814 1 1295 1567 177 174 0 chr17 93125772 93126106 -2146545 - RLTR17 LTR ERVK 0 692 301 1 1295 413 225 11 11 chr17 93126561 93126651 -2146000 + RLTR17 LTR ERVK 476 565 -127 1 1295 329 151 19 0 chr17 93126678 93126731 -2145920 + RLTR17 LTR ERVK 639 692 0 1 1295 1253 214 104 39 chr17 93126732 93127166 -2145485 + Lx6 LINE L1 4070 4531 -1349 1 1295 6872 93 23 3 chr17 93127160 93128295 -2144356 + L1_Mus1 LINE L1 5415 6567 0 1 1295 4170 222 65 68 chr17 93128305 93129717 -2142934 + Lx6 LINE L1 4514 5919 -1777 1 1295 240 59 14 68 chr17 93129749 93129822 -2142829 + (TTTTTG)n Simple_repeat Simple_repeat 5 73 0 1 1295 1570 286 25 2 chr17 93129824 93130231 -2142420 + MTC LTR MaLR 3 418 -3 1 1295 2210 289 56 15 chr17 93130232 93130962 -2141689 + Lx6 LINE L1 5948 6707 -753 1 1295 24 0 0 0 chr17 93131091 93131115 -2141536 + AT_rich Low_complexity Low_complexity 1 24 0 1 1295 553 266 38 6 chr17 93131131 93131290 -2141361 + MTD LTR MaLR 256 419 0 1 1295 1137 56 0 0 chr17 93131447 93131590 -2141061 + B1_Mus1 SINE Alu 1 143 -5 1 1295 449 269 82 41 chr17 93131872 93132144 -2140507 + MTD LTR MaLR 1 405 -14 1 1295 21 57 0 0 chr17 93132465 93132500 -2140151 + AT_rich Low_complexity Low_complexity 1 35 0 1 1295 559 235 52 0 chr17 93132729 93132865 -2139786 + B1_Mm SINE Alu 5 147 0 1 1295 772 329 53 69 chr17 93133106 93133557 -2139094 + Lx8 LINE L1 6674 7117 -356 1 1295 562 331 17 0 chr17 93133672 93133847 -2138804 + Lx8 LINE L1 7161 7338 -135 1 1295 1387 70 0 0 chr17 93133854 93134026 -2138625 - L1_Mus1 LINE L1 -130 6437 6266 1 1295 594 65 0 31 chr17 93134038 93134134 -2138517 + L1Md_F2 LINE L1 6476 6568 -14 1 1295 21 0 0 0 chr17 93134134 93134155 -2138496 + AT_rich Low_complexity Low_complexity 1 21 0 1 1295 23 33 0 0 chr17 93134434 93134464 -2138187 + AT_rich Low_complexity Low_complexity 1 30 0 1 1295 241 222 0 31 chr17 93134763 93134828 -2137823 + A-rich Low_complexity Low_complexity 6 68 0 1 1295 240 179 54 0 chr17 93134882 93134938 -2137713 - L1M4 LINE L1 -261 5917 5859 1 1295 21 36 0 0 chr17 93135397 93135425 -2137226 + AT_rich Low_complexity Low_complexity 1 28 0 1 1295 2113 196 67 128 chr17 93135537 93136272 -2136379 + RMER6C LTR ERVK 1 690 0 1 1295 21 0 0 0 chr17 93137227 93137248 -2135403 + AT_rich Low_complexity Low_complexity 1 21 0 1 1295 215 254 0 15 chr17 93137511 93137579 -2135072 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 1295 210 118 0 0 chr17 93137738 93137772 -2134879 + (TTTTA)n Simple_repeat Simple_repeat 4 37 0 1 1295 23 0 0 0 chr17 93139358 93139381 -2133270 + AT_rich Low_complexity Low_complexity 1 23 0 1 1295 255 61 0 0 chr17 93139797 93139830 -2132821 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1 1295 3852 189 21 45 chr17 93139862 93140703 -2131948 - Lx LINE L1 -7 6647 5827 1 1295 7899 52 1 3 chr17 93140702 93142169 -2130482 - L1Md_F2 LINE L1 0 6582 5120 1 1295 5392 182 56 84 chr17 93142158 93142944 -2129707 - L1_Mur2 LINE L1 -54 5823 4974 1 1295 2121 88 6 50 chr17 93142944 93143281 -2129370 + RLTRETN_Mm LTR ERVK 1 322 0 1 1295 5392 182 56 84 chr17 93143281 93143852 -2128799 - L1_Mur2 LINE L1 -904 4973 4504 1 1295 2137 169 0 43 chr17 93143843 93144282 -2128369 + L1_Mur2 LINE L1 4104 4523 -1363 1 1295 1285 248 60 83 chr17 93144571 93145134 -2127517 + RLTR18-int LTR ERVK 4127 4676 -685 2 1295 2073 110 32 0 chr17 93145141 93145450 -2127201 - Lx LINE L1 -736 5918 5600 2 1295 4100 121 21 50 chr17 93145450 93146157 -2126494 + RLTR22_Mur LTR ERVK 1162 1848 0 2 1295 2055 239 72 14 chr17 93146158 93146730 -2125921 + L1_Mur3 LINE L1 598 1202 -6510 2 1295 237 98 0 0 chr17 93146867 93146908 -2125743 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 2 1295 922 155 77 0 chr17 93147082 93147263 -2125388 - L1_Mur2 LINE L1 -1870 4010 3816 1 1295 235 141 0 52 chr17 93147312 93147409 -2125242 + T-rich Low_complexity Low_complexity 4 95 0 2 1295 559 309 56 20 chr17 93147454 93147652 -2124999 - RLTR18 LTR ERVK -1 615 411 2 1295 477 282 34 17 chr17 93147841 93147960 -2124691 - RLTR18 LTR ERVK -464 152 32 2 1295 1566 218 73 14 chr17 93147991 93148414 -2124237 - RLTR18-int LTR ERVK -5 5356 4909 2 1295 573 241 43 65 chr17 93148580 93148656 -2123995 - RLTR18-int LTR ERVK -497 4864 4799 2 1295 462 36 0 0 chr17 93148656 93148712 -2123939 + (TAA)n Simple_repeat Simple_repeat 2 57 0 2 1295 573 241 43 65 chr17 93148712 93148821 -2123830 - RLTR18-int LTR ERVK -563 4798 4683 2 1295 898 17 0 17 chr17 93148871 93148989 -2123662 + (TTTC)n Simple_repeat Simple_repeat 2 117 0 2 1295 548 287 60 44 chr17 93149006 93149201 -2123450 - B3 SINE B2 -4 212 19 2 1295 4088 131 35 13 chr17 93149221 93149932 -2122719 - Lx LINE L1 -7 6647 5921 2 1295 4054 172 23 12 chr17 93149932 93150472 -2122179 + L1_Mm LINE L1 4751 5296 -587 2 1295 2247 94 39 126 chr17 93150472 93150910 -2121741 - MTB LTR MaLR 0 400 1 2 1295 4054 172 23 12 chr17 93150910 93151141 -2121510 + L1_Mm LINE L1 5297 5531 -352 2 1295 643 69 0 47 chr17 93151141 93151248 -2121403 + Lx LINE L1 6544 6645 -9 2 1295 584 296 39 48 chr17 93151248 93151290 -2121361 + L1MD LINE L1 5566 5605 -637 2 1295 825 107 0 0 chr17 93151397 93151519 -2121132 + (GGAAA)n Simple_repeat Simple_repeat 3 124 0 2 1295 509 0 16 0 chr17 93151519 93151580 -2121071 + (GAAA)n Simple_repeat Simple_repeat 1 62 0 2 1295 2260 86 19 145 chr17 93151580 93152057 -2120594 - RLTR22_Mur LTR ERVK -724 1124 708 2 1295 239 143 32 0 chr17 93152955 93153018 -2119633 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 2 1295 871 88 29 0 chr17 93153025 93153162 -2119489 + (GGGAGA)n Simple_repeat Simple_repeat 6 146 0 2 1295 444 298 48 27 chr17 93153217 93153493 -2119158 + MTE2a LTR MaLR 75 419 0 2 1295 186 208 0 0 chr17 93153662 93153710 -2118941 + A-rich Low_complexity Low_complexity 1 48 0 2 1295 1386 100 70 0 chr17 93154878 93155078 -2117573 + Lx2 LINE L1 6348 6561 -436 2 1295 2641 127 9 20 chr17 93155176 93155619 -2117032 + Lx2 LINE L1 6559 6996 -1 2 1295 30 77 0 0 chr17 93155619 93155684 -2116967 + AT_rich Low_complexity Low_complexity 1 65 0 2 1295 21 36 0 0 chr17 93155941 93155969 -2116682 + AT_rich Low_complexity Low_complexity 1 28 0 2 1295 1029 139 44 11 chr17 93156070 93156252 -2116399 + B2_Mm2 SINE B2 1 188 -7 2 1295 4014 227 72 48 chr17 93156479 93157035 -2115616 - RLTR22_Mur LTR ERVK -599 1249 672 2 1295 3008 64 13 3 chr17 93157035 93157427 -2115224 + MTA_Mm LTR MaLR 1 396 0 2 1295 4014 227 72 48 chr17 93157427 93158089 -2114562 - RLTR22_Mur LTR ERVK -1177 671 1 2 1295 441 0 0 0 chr17 93158139 93158188 -2114463 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 2 1295 2804 108 56 21 chr17 93159217 93159683 -2112968 + RLTR45 LTR ERVK 1 482 0 2 1295 2357 181 27 38 chr17 93159791 93160315 -2112336 + L1_Mus3 LINE L1 717 1234 -5423 2 1295 3166 145 16 76 chr17 93160283 93160997 -2111654 + L1_Mus3 LINE L1 1071 1707 -4176 2 1295 1182 53 0 0 chr17 93160997 93161147 -2111504 + (GAAA)n Simple_repeat Simple_repeat 1 150 0 2 1295 3166 154 15 118 chr17 93161147 93161411 -2111240 + L1_Mus3 LINE L1 1708 1963 -3920 2 1295 6922 139 26 4 chr17 93161407 93163428 -2109223 + L1_Mus3 LINE L1 4568 6635 -3 2 1295 380 366 70 38 chr17 93165116 93165329 -2107322 + Lx8 LINE L1 7180 7399 -74 2 1295 1155 62 0 7 chr17 93165825 93165971 -2106680 + B1_Mm SINE Alu 2 146 -1 2 1295 3281 224 30 9 chr17 93166205 93166943 -2105708 - Lx2B LINE L1 -10 6990 6238 2 1295 317 274 25 42 chr17 93167069 93167187 -2105464 - Lx3C LINE L1 -755 6221 6106 2 1295 611 163 0 0 chr17 93167185 93167283 -2105368 + Lx4B LINE L1 5796 5893 -1165 2 1295 297 233 112 82 chr17 93167306 93167422 -2105229 + BGLII_B LTR ERVK 62 191 -250 2 1295 839 61 9 0 chr17 93167422 93167536 -2105115 + (GAGAA)n Simple_repeat Simple_repeat 5 119 0 2 1295 530 260 79 82 chr17 93167536 93167899 -2104752 + BGLII_B LTR ERVK 23 436 -5 2 1295 5083 204 28 11 chr17 93168040 93168426 -2104225 - L1_Mur2 LINE L1 -3421 2456 2062 2 1295 315 0 0 0 chr17 93168426 93168461 -2104190 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1295 5083 210 29 12 chr17 93168461 93169637 -2103014 - L1_Mur2 LINE L1 -3816 2061 865 2 1295 21 36 0 0 chr17 93170172 93170200 -2102451 + AT_rich Low_complexity Low_complexity 1 28 0 2 1295 710 280 73 36 chr17 93170298 93170546 -2102105 + ORR1D2 LTR MaLR 1 257 -113 2 1295 216 213 53 0 chr17 93170636 93170711 -2101940 + (TA)n Simple_repeat Simple_repeat 1 79 0 2 1295 310 179 28 34 chr17 93170728 93170907 -2101744 + (TA)n Simple_repeat Simple_repeat 2 179 0 2 1295 312 27 0 0 chr17 93170911 93170948 -2101703 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1295 183 170 0 0 chr17 93171158 93171205 -2101446 + (ATG)n Simple_repeat Simple_repeat 2 48 0 2 1295 492 383 128 37 chr17 93171582 93171989 -2100662 + MLT2B2 LTR ERVL 4 447 -68 2 1295 246 116 0 0 chr17 93171989 93172032 -2100619 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1295 369 141 0 0 chr17 93172033 93172118 -2100533 + (CAGA)n Simple_repeat Simple_repeat 2 86 0 2 1295 181 370 80 27 chr17 93172655 93172730 -2099921 - MIRm SINE MIR -38 238 160 2 1295 5778 112 10 6 chr17 93173103 93173966 -2098685 - L1_Mus4 LINE L1 -7 6629 5763 2 1295 979 109 0 0 chr17 93173992 93174129 -2098522 - B1_Mus1 SINE Alu -9 139 3 2 1295 1262 191 0 0 chr17 93174799 93175035 -2097616 - L1_Mur2 LINE L1 -3119 2758 2523 2 1295 1520 261 64 0 chr17 93175035 93175426 -2097225 + Lx5 LINE L1 6331 6746 -304 2 1295 441 77 28 37 chr17 93175991 93176099 -2096552 + (TTTG)n Simple_repeat Simple_repeat 3 109 0 2 1295 1154 82 0 0 chr17 93176099 93176246 -2096405 - B1_Mm SINE Alu 0 147 1 2 1295 22 35 0 0 chr17 93176634 93176663 -2095988 + AT_rich Low_complexity Low_complexity 1 29 0 2 1295 684 197 8 0 chr17 93177292 93177409 -2095242 - RSINE1 SINE B4 -43 122 5 2 1295 316 215 24 37 chr17 93177483 93177565 -2095086 - MTEa LTR MaLR 0 379 299 2 1295 716 161 0 24 chr17 93177803 93177930 -2094721 - B1_Mus1 SINE Alu -14 134 11 2 1295 6206 114 2 3 chr17 93177930 93178830 -2093821 + L1_Mus4 LINE L1 5726 6624 -12 2 1295 446 309 152 10 chr17 93179096 93179385 -2093266 - L1MEg LINE L1 -461 5717 5388 2 1295 264 103 52 0 chr17 93179585 93179643 -2093008 + (TTTA)n Simple_repeat Simple_repeat 2 62 0 2 1295 362 57 19 0 chr17 93179776 93179829 -2092822 + (CATA)n Simple_repeat Simple_repeat 3 56 0 2 1295 757 333 10 29 chr17 93179871 93180078 -2092573 - B3 SINE B2 -13 203 1 2 1295 238 282 24 0 chr17 93180176 93180261 -2092390 - L1MEg LINE L1 -2608 3538 3452 2 1295 508 326 58 80 chr17 93180312 93180639 -2092012 - L1MEg LINE L1 -5026 1216 897 2 1295 499 311 81 51 chr17 93181634 93181966 -2090685 + RLTR15 LTR ERVK 1 342 -17 2 1295 250 188 16 93 chr17 93182048 93182177 -2090474 + A-rich Low_complexity Low_complexity 2 120 0 2 1295 1272 156 186 0 chr17 93183970 93184239 -2088412 - ORR1A2 LTR MaLR -8 319 1 2 1295 957 181 10 36 chr17 93184435 93184630 -2088021 - B2_Mm2 SINE B2 0 195 6 2 1295 7927 143 61 37 chr17 93185108 93186933 -2085718 - Lx3A LINE L1 -4 6977 5153 2 1295 279 0 0 0 chr17 93186933 93186964 -2085687 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1295 5002 134 88 80 chr17 93186964 93187303 -2085348 - Lx3A LINE L1 -734 5152 4803 2 1295 21 0 0 0 chr17 93187594 93187615 -2085036 + AT_rich Low_complexity Low_complexity 1 21 0 2 1295 8119 48 0 4 chr17 93187761 93189207 -2083444 - L1Md_F2 LINE L1 -8 6574 5135 2 1295 4323 164 15 59 chr17 93189210 93190424 -2082227 - Lx3A LINE L1 -3674 2203 1051 2 1295 332 336 102 35 chr17 93190554 93190712 -2081939 - L1M5 LINE L1 -1801 4345 4182 2 1295 207 0 0 0 chr17 93190712 93190735 -2081916 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1295 332 336 102 35 chr17 93190735 93190998 -2081653 - L1M5 LINE L1 -1965 4181 3896 2 1295 21 71 0 0 chr17 93191172 93191214 -2081437 + AT_rich Low_complexity Low_complexity 1 42 0 2 1295 405 0 0 0 chr17 93191361 93191406 -2081245 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1295 195 69 0 0 chr17 93191411 93191440 -2081211 + (GA)n Simple_repeat Simple_repeat 2 30 0 2 1295 25 0 0 0 chr17 93191551 93191576 -2081075 + AT_rich Low_complexity Low_complexity 1 25 0 2 1296 473 356 100 31 chr17 93192996 93193355 -2079296 - MLT1D LTR MaLR -8 497 114 2 1296 648 138 15 8 chr17 93193624 93193755 -2078896 + L1_Mus3 LINE L1 6507 6638 0 2 1296 2689 68 17 6 chr17 93193913 93194266 -2078385 + IAPEY2_LTR LTR ERVK 1 357 0 2 1296 491 122 28 18 chr17 93194626 93194677 -2077974 + polypurine Low_complexity Low_complexity 2 54 0 2 1296 1097 118 0 6 chr17 93194677 93194856 -2077795 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 2 1296 491 122 28 18 chr17 93194856 93194876 -2077775 + polypurine Low_complexity Low_complexity 55 75 0 2 1296 1083 82 0 0 chr17 93194876 93195011 -2077640 + B1_Mm SINE Alu 1 135 -12 2 1296 246 95 0 0 chr17 93195011 93195053 -2077598 + (CAA)n Simple_repeat Simple_repeat 1 42 0 2 1296 1083 82 0 0 chr17 93195053 93195064 -2077587 + B1_Mm SINE Alu 136 146 -1 2 1296 491 122 28 18 chr17 93195064 93195100 -2077551 + polypurine Low_complexity Low_complexity 76 111 0 2 1296 938 108 14 0 chr17 93195906 93196045 -2076606 + B2_Mm2 SINE B2 6 146 -49 2 1296 1287 228 47 50 chr17 93196072 93196391 -2076260 - MTC LTR MaLR 0 421 104 2 1296 1268 267 70 69 chr17 93196562 93197101 -2075550 + RLTR20B3 LTR ERVK 23 562 -15 2 1296 6826 117 21 2 chr17 93197127 93198771 -2073880 - L1_Mus3 LINE L1 -6 6632 4956 2 1296 29 78 0 0 chr17 93199186 93199250 -2073401 + AT_rich Low_complexity Low_complexity 1 64 0 2 1296 2167 89 6 6 chr17 93199356 93199671 -2072980 - L1_Mus2 LINE L1 -1 6565 6251 2 1296 338 68 0 0 chr17 93199671 93199715 -2072936 + L1_Mus3 LINE L1 5826 5869 -769 2 1296 346 337 19 63 chr17 93200055 93200261 -2072390 - Lx7 LINE L1 -364 7332 7136 2 1296 23 54 0 0 chr17 93200481 93200518 -2072133 + AT_rich Low_complexity Low_complexity 1 37 0 2 1296 283 225 12 24 chr17 93200542 93200624 -2072027 + T-rich Low_complexity Low_complexity 5 85 0 2 1296 370 273 51 80 chr17 93201691 93202002 -2070649 - Lx9 LINE L1 -4 7640 7339 2 1296 27 0 0 0 chr17 93202107 93202134 -2070517 + AT_rich Low_complexity Low_complexity 1 27 0 2 1296 7285 67 4 13 chr17 93202512 93204055 -2068596 - L1Md_F2 LINE L1 -2 6580 5056 3 1296 293 271 86 74 chr17 93204064 93204227 -2068424 - Lx9 LINE L1 -469 7175 7011 2 1296 1119 63 7 0 chr17 93205469 93205611 -2067040 - B1_Mm SINE Alu -2 145 3 3 1296 22 56 0 0 chr17 93205769 93205805 -2066846 + AT_rich Low_complexity Low_complexity 1 36 0 3 1296 229 267 163 57 chr17 93206822 93206945 -2065706 - MLT1A LTR MaLR -233 141 6 3 1296 21 82 0 0 chr17 93207614 93207663 -2064988 + AT_rich Low_complexity Low_complexity 1 49 0 3 1296 629 258 0 0 chr17 93207908 93208059 -2064592 + L1VL4 LINE L1 526 676 -5626 3 1296 232 262 47 70 chr17 93208248 93208334 -2064317 - RMER13B LTR ERVK -213 695 612 3 1296 29 0 0 0 chr17 93208515 93208544 -2064107 + AT_rich Low_complexity Low_complexity 1 29 0 3 1296 227 167 67 0 chr17 93208748 93208808 -2063843 + T-rich Low_complexity Low_complexity 3 66 0 3 1296 440 194 19 97 chr17 93208990 93209144 -2063507 - L1_Mur3 LINE L1 -2952 2928 2787 3 1296 1067 146 0 0 chr17 93209144 93209302 -2063349 + RLTR13D4 LTR ERVK 1 158 -875 3 1296 672 127 0 0 chr17 93209302 93209412 -2063239 + L1_Mm LINE L1 3873 3982 -1901 3 1296 202 51 24 49 chr17 93210979 93211020 -2061631 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 3 1296 248 306 176 34 chr17 93211382 93211558 -2061093 - MIRb SINE MIR -63 205 1 3 1296 242 175 143 0 chr17 93211660 93211723 -2060928 - RMER1A Other Other -2 1028 957 3 1296 272 268 121 95 chr17 93211840 93211990 -2060661 - RMER17C LTR ERVK -173 237 72 3 1296 252 0 0 0 chr17 93211990 93212018 -2060633 + (GA)n Simple_repeat Simple_repeat 2 29 0 3 1296 272 268 121 95 chr17 93212018 93212098 -2060553 - RMER17C LTR ERVK -339 71 1 3 1296 1087 242 65 39 chr17 93212098 93212408 -2060243 - RMER17C-int LTR ERVK 0 3238 2921 3 1296 571 186 109 14 chr17 93212418 93212565 -2060086 + Lx3A LINE L1 6810 6970 -11 3 1296 468 86 0 0 chr17 93212565 93212635 -2060016 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 3 1296 406 185 148 71 chr17 93212635 93212656 -2059995 + Lx3_Mus LINE L1 6991 7009 0 3 1296 266 215 31 0 chr17 93212682 93212747 -2059904 - RMER17C-int LTR ERVK -1814 1424 1358 3 1296 474 81 11 33 chr17 93212747 93212837 -2059814 - L1Md_F2 LINE L1 -1 6581 6494 3 1296 477 262 74 0 chr17 93212840 93212962 -2059689 - B3A SINE B2 -66 132 2 3 1296 8100 48 1 4 chr17 93212976 93214215 -2058436 - L1Md_F2 LINE L1 -2 6580 5346 3 1296 6609 8 0 0 chr17 93214361 93215116 -2057535 - L1Md_F2 LINE L1 -1039 4844 4090 3 1296 5455 25 6 0 chr17 93215116 93215755 -2056896 + L1Md_A LINE L1 5940 6582 0 3 1296 30 27 0 0 chr17 93215939 93215976 -2056675 + AT_rich Low_complexity Low_complexity 1 37 0 3 1296 29 47 0 0 chr17 93216085 93216128 -2056523 + AT_rich Low_complexity Low_complexity 1 43 0 3 1296 180 77 0 0 chr17 93217314 93217340 -2055311 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 1296 246 62 0 0 chr17 93217342 93217374 -2055277 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 1296 262 340 69 10 chr17 93218395 93218496 -2054155 + B4A SINE B4 126 232 -60 3 1296 681 13 0 0 chr17 93218554 93218632 -2054019 + (GA)n Simple_repeat Simple_repeat 2 79 0 3 1296 3665 169 54 15 chr17 93220065 93220731 -2051920 - RLTR17 LTR ERVK 0 692 1 3 1296 188 184 14 0 chr17 93220860 93220901 -2051750 + MIRc SINE MIR 123 169 -99 3 1296 197 274 195 42 chr17 93221899 93222017 -2050634 - L2a LINE L2 -10 3416 3281 3 1296 25 31 0 0 chr17 93222906 93222938 -2049713 + AT_rich Low_complexity Low_complexity 1 32 0 3 1296 422 0 38 0 chr17 93223564 93223617 -2049034 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 3 1296 7496 205 48 74 chr17 93223665 93227055 -2045596 + RMER17C-int LTR ERVK 9 3217 -21 3 1296 5208 183 37 11 chr17 93227080 93228185 -2044466 - L1_Mur2 LINE L1 -1400 4477 3344 3 1296 25 0 0 0 chr17 93228290 93228315 -2044336 + AT_rich Low_complexity Low_complexity 1 25 0 3 1296 886 271 3 35 chr17 93228330 93228617 -2044034 - RMER1B Other Other 0 1066 789 3 1296 264 299 93 0 chr17 93228617 93228714 -2043937 - RMER12 LTR ERVK 0 1322 1217 3 1296 823 248 58 58 chr17 93228714 93228988 -2043663 - RMER12 LTR ERVK -55 1267 994 3 1296 426 121 0 0 chr17 93228988 93229054 -2043597 + (GGAA)n Simple_repeat Simple_repeat 4 69 0 3 1296 272 273 152 18 chr17 93229100 93229264 -2043387 - RMER12 LTR ERVK -584 738 553 3 1296 410 290 61 14 chr17 93229275 93229422 -2043229 - RMER12 LTR ERVK -396 1008 855 3 1296 236 262 24 12 chr17 93229444 93229529 -2043122 - RLTR22_Mus LTR ERVK -1232 576 491 3 1296 316 177 134 50 chr17 93229539 93229658 -2042993 - RMER12 LTR ERVK -788 534 406 3 1296 1314 229 15 84 chr17 93229691 93230024 -2042627 - RMER12 LTR ERVK -1012 310 1 3 1296 473 232 98 0 chr17 93230030 93230142 -2042509 - RMER1A Other Other -304 726 604 3 1296 577 205 8 8 chr17 93230144 93230267 -2042384 + RMER3D-int LTR ERVK 2499 2621 -221 3 1296 348 195 0 0 chr17 93230268 93230345 -2042306 + RMER3D-int LTR ERVK 2755 2831 -11 3 1296 865 269 249 49 chr17 93230348 93230730 -2041921 + RLTR17 LTR ERVK 91 549 -143 3 1296 351 171 21 74 chr17 93230750 93230939 -2041712 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 3 1296 24 0 0 0 chr17 93231001 93231025 -2041626 + AT_rich Low_complexity Low_complexity 1 24 0 3 1296 207 125 0 0 chr17 93231176 93231216 -2041435 + (T)n Simple_repeat Simple_repeat 1 40 0 3 1296 325 24 0 0 chr17 93231569 93231611 -2041040 - L1_Mus2 LINE L1 -6 6560 6519 3 1296 2844 180 12 8 chr17 93231838 93232354 -2040297 - Lx2 LINE L1 -538 6459 5942 3 1296 1281 141 0 0 chr17 93232352 93232536 -2040115 + Lx2 LINE L1 6446 6629 -368 3 1296 608 0 34 22 chr17 93232544 93232633 -2040018 + (TCTA)n Simple_repeat Simple_repeat 4 93 0 3 1296 997 46 34 28 chr17 93232645 93232824 -2039827 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 3 1296 264 184 11 30 chr17 93232834 93232900 -2039751 - B2_Mm2 SINE B2 -102 114 47 3 1296 305 167 0 0 chr17 93232939 93232993 -2039658 - B2_Mm1t SINE B2 -42 151 98 3 1296 2058 129 59 21 chr17 93232994 93233334 -2039317 + Lx LINE L1 6290 6642 -12 3 1296 197 33 0 32 chr17 93233335 93233366 -2039285 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 3 1296 4318 175 7 30 chr17 93234136 93234790 -2037861 + L1Md_F2 LINE L1 481 1130 -5594 3 1296 1629 56 14 0 chr17 93234790 93235004 -2037647 + L1Md_F3 LINE L1 6368 6584 0 3 1296 34118 75 8 7 chr17 93235004 93240037 -2032614 + L1Md_F2 LINE L1 1131 6150 -432 3 1296 262 389 0 0 chr17 93240101 93240191 -2032460 - Lx8 LINE L1 -213 7260 7171 3 1296 2931 49 3 5 chr17 93240265 93240634 -2032017 + L1Md_F2 LINE L1 6208 6575 -7 3 1296 507 328 83 60 chr17 93240639 93240930 -2031721 + Lx8 LINE L1 6419 6711 -762 3 1296 561 94 0 0 chr17 93240930 93241015 -2031636 + (TG)n Simple_repeat Simple_repeat 2 86 0 3 1296 507 338 80 60 chr17 93241015 93241399 -2031252 + Lx8 LINE L1 6702 7098 -598 3 1296 255 309 71 25 chr17 93241486 93241725 -2030926 - RMER17D LTR ERVK -333 556 307 3 1296 995 107 6 0 chr17 93241725 93241903 -2030748 + (GGGAA)n Simple_repeat Simple_repeat 2 180 0 3 1296 663 385 13 10 chr17 93242029 93242425 -2030226 + Lx8 LINE L1 6872 7268 -205 3 1296 2582 83 45 5 chr17 93242693 93243067 -2029584 + L1Md_F2 LINE L1 6188 6576 -6 3 1296 3496 111 7 13 chr17 93243386 93243923 -2028728 - L1_Mur1 LINE L1 -254 5632 5099 3 1296 6218 98 8 5 chr17 93243892 93244831 -2027820 - L1_Mur1 LINE L1 -1407 4479 3538 3 1296 5773 133 29 18 chr17 93244836 93245817 -2026834 + L1_Mus3 LINE L1 5647 6637 -1 3 1296 374 384 30 59 chr17 93246042 93246211 -2026440 + RSINE1 SINE B4 2 165 0 3 1296 21 0 0 0 chr17 93246979 93247000 -2025651 + AT_rich Low_complexity Low_complexity 1 21 0 3 1296 1491 276 52 5 chr17 93247206 93247647 -2025004 + Lx7 LINE L1 6637 7098 -598 3 1296 1211 255 58 10 chr17 93247738 93248047 -2024604 + ORR1C2 LTR MaLR 1 324 -60 3 1296 248 204 0 0 chr17 93248040 93248084 -2024567 - ORR1C1 LTR MaLR -312 66 23 3 1296 1632 322 57 41 chr17 93248086 93248847 -2023804 + Lx8 LINE L1 6590 7358 -115 3 1296 1085 78 0 0 chr17 93248847 93248988 -2023663 + B1_Mm SINE Alu 1 141 -6 3 1296 593 61 0 12 chr17 93248990 93249073 -2023578 + (GAAA)n Simple_repeat Simple_repeat 2 83 0 3 1296 1632 322 57 41 chr17 93249073 93249170 -2023481 + Lx8 LINE L1 7359 7462 -11 3 1296 506 365 39 0 chr17 93249368 93249546 -2023105 - B3 SINE B2 -26 190 6 3 1296 1351 76 0 0 chr17 93249571 93249742 -2022909 + L1Md_F2 LINE L1 5416 5586 -297 3 1296 6945 101 5 1 chr17 93249742 93250717 -2021934 + L1Md_F2 LINE L1 5587 6565 -17 3 1296 408 40 0 0 chr17 93250730 93250780 -2021871 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 3 1296 215 134 35 47 chr17 93252017 93252103 -2020548 + (TA)n Simple_repeat Simple_repeat 2 86 0 3 1296 346 234 39 39 chr17 93252190 93252368 -2020283 + (TAGA)n Simple_repeat Simple_repeat 2 179 0 3 1296 415 414 46 28 chr17 93252609 93252932 -2019719 - MER74A LTR ERVL -196 362 34 3 1296 313 183 0 91 chr17 93254766 93254832 -2017819 + B1_Mus1 SINE Alu 1 60 -88 3 1296 244 0 0 158 chr17 93254833 93254953 -2017698 + (CAGAG)n Simple_repeat Simple_repeat 5 105 0 3 1296 457 218 0 38 chr17 93254956 93255061 -2017590 + B1_Mus2 SINE Alu 42 142 -5 3 1296 456 233 17 0 chr17 93255074 93255246 -2017405 + GA-rich Low_complexity Low_complexity 3 177 0 3 1296 280 316 45 62 chr17 93255297 93255476 -2017175 - MLT1A1 LTR MaLR -201 207 32 3 1296 1035 84 0 0 chr17 93256289 93256432 -2016219 + (TTCC)n Simple_repeat Simple_repeat 3 145 0 3 1296 1674 107 11 4 chr17 93256438 93256702 -2015949 - L1_Mus2 LINE L1 -9 6557 6292 3 1296 562 55 0 0 chr17 93256702 93256775 -2015876 + L1_Mus2 LINE L1 6258 6330 -236 3 1296 2657 110 101 0 chr17 93256831 93257239 -2015412 + RLTR44B LTR ERVK 1 449 0 3 1296 236 30 30 0 chr17 93259666 93259699 -2012952 + (TC)n Simple_repeat Simple_repeat 1 34 0 3 1296 189 0 0 0 chr17 93259699 93259720 -2012931 + (TA)n Simple_repeat Simple_repeat 2 22 0 3 1296 315 0 0 0 chr17 93259720 93259754 -2012897 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1296 26 0 0 0 chr17 93259832 93259858 -2012793 + AT_rich Low_complexity Low_complexity 1 26 0 3 1296 26 64 0 0 chr17 93259973 93260020 -2012631 + AT_rich Low_complexity Low_complexity 1 47 0 3 1296 238 206 13 27 chr17 93260106 93260181 -2012470 + (TTAA)n Simple_repeat Simple_repeat 1 74 0 3 1296 447 330 31 10 chr17 93260469 93260662 -2011989 + B3 SINE B2 20 216 0 3 1296 261 57 0 0 chr17 93261036 93261071 -2011580 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1296 239 191 0 16 chr17 93261153 93261217 -2011434 + GA-rich Low_complexity Low_complexity 5 67 0 3 1296 7170 131 5 25 chr17 93261394 93262393 -2010258 - MusHAL1 LINE L1 -303 2409 1436 4 1296 252 0 0 0 chr17 93262393 93262421 -2010230 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 4 1296 7170 131 5 25 chr17 93262421 93262674 -2009977 - MusHAL1 LINE L1 -1277 1435 1182 4 1296 5623 158 9 12 chr17 93262676 93264139 -2008512 - Lx LINE L1 -358 6296 4832 4 1296 484 245 14 84 chr17 93264131 93264345 -2008306 - L1_Mur2 LINE L1 -4401 1476 1278 4 1296 23 0 0 0 chr17 93264799 93264822 -2007829 + AT_rich Low_complexity Low_complexity 1 23 0 4 1296 21 0 0 0 chr17 93265556 93265577 -2007074 + AT_rich Low_complexity Low_complexity 1 21 0 4 1296 1419 39 39 0 chr17 93266313 93266494 -2006157 - B2_Mm1a SINE B2 -5 188 1 4 1296 24 32 0 0 chr17 93267051 93267082 -2005569 + AT_rich Low_complexity Low_complexity 1 31 0 4 1296 737 333 122 21 chr17 93267410 93267796 -2004855 + Lx8 LINE L1 7038 7462 -11 4 1296 1039 251 7 16 chr17 93267839 93268102 -2004549 + Lx5 LINE L1 6754 7054 -4 4 1296 180 111 0 0 chr17 93268638 93268665 -2003986 + (CAA)n Simple_repeat Simple_repeat 1 27 0 4 1296 216 0 0 0 chr17 93269347 93269371 -2003280 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 1296 2680 269 131 93 chr17 93269392 93270468 -2002183 + Lx6 LINE L1 6175 7296 -164 4 1296 279 79 0 0 chr17 93270468 93270506 -2002145 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 1296 2680 269 131 93 chr17 93270506 93270630 -2002021 + Lx6 LINE L1 7297 7420 -40 4 1296 597 282 144 28 chr17 93273001 93273662 -1998989 + L1M2 LINE L1 4960 5703 -481 4 1296 2366 128 48 19 chr17 93273694 93274156 -1998495 - RMER17A LTR ERVK -4 747 273 4 1296 1364 49 0 0 chr17 93274436 93274599 -1998052 - L1Md_F2 LINE L1 -179 5704 5542 4 1296 6882 36 16 3 chr17 93274599 93275445 -1997206 + L1Md_F2 LINE L1 5724 6580 -2 4 1296 1060 138 5 5 chr17 93275723 93275913 -1996738 - L1_Mus4 LINE L1 -1 6635 6446 4 1296 295 346 65 14 chr17 93276184 93276322 -1996329 + MIR SINE MIR 18 162 -100 4 1296 303 165 0 0 chr17 93276371 93276456 -1996195 + (TATATG)n Simple_repeat Simple_repeat 4 88 0 4 1296 5323 125 42 18 chr17 93277660 93278566 -1994085 + Lx3A LINE L1 6036 6963 -18 4 1296 468 0 0 0 chr17 93278566 93278618 -1994033 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 1296 192 111 0 0 chr17 93278826 93278862 -1993789 + (A)n Simple_repeat Simple_repeat 1 36 0 4 1296 3113 42 0 0 chr17 93278951 93279329 -1993322 - L1Md_T LINE L1 0 6582 6205 4 1296 5714 18 0 0 chr17 93279329 93279985 -1992666 + L1_Mm LINE L1 5165 5820 -63 4 1296 2198 268 18 40 chr17 93281117 93281847 -1990804 + Lx9 LINE L1 6925 7638 -6 4 1296 25 0 0 0 chr17 93282334 93282359 -1990292 + AT_rich Low_complexity Low_complexity 1 25 0 4 1296 1139 64 11 17 chr17 93283328 93283504 -1989147 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 4 1296 556 303 15 4 chr17 93283517 93283667 -1988984 + B1_Mur2 SINE Alu 3 149 0 4 1296 1125 68 0 7 chr17 93283772 93283919 -1988732 + B1_Mm SINE Alu 2 147 0 4 1296 202 61 61 0 chr17 93283920 93283953 -1988698 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1296 375 80 0 0 chr17 93283959 93284009 -1988642 - L1_Mur1 LINE L1 -1248 4638 4589 4 1296 2519 199 44 21 chr17 93284009 93284640 -1988011 - RLTR25A LTR ERVK -335 768 1 4 1296 291 28 0 0 chr17 93285273 93285309 -1987342 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1296 333 263 0 224 chr17 93285347 93285494 -1987157 - B3A SINE B2 -64 134 8 4 1296 358 222 224 34 chr17 93287327 93287506 -1985145 - Lx9 LINE L1 -112 7532 7314 4 1296 576 0 0 0 chr17 93287506 93287570 -1985081 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 4 1296 358 222 224 34 chr17 93287570 93287595 -1985056 - Lx9 LINE L1 -331 7313 7289 4 1296 267 31 0 0 chr17 93287625 93287657 -1984994 + (TTTTTA)n Simple_repeat Simple_repeat 5 36 0 4 1296 629 213 48 70 chr17 93287668 93287855 -1984796 - Lx3C LINE L1 -4 6969 6787 4 1296 3926 174 24 11 chr17 93287857 93288577 -1984074 - Lx3C LINE L1 -361 6615 5887 4 1296 21551 126 18 12 chr17 93288577 93288909 -1983742 + MERVK26-int LTR ERVK 631 961 -5958 4 1296 236 30 30 0 chr17 93288909 93288942 -1983709 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1296 21551 126 18 12 chr17 93288942 93290818 -1981833 + MERVK26-int LTR ERVK 962 2844 -4075 4 1296 1091 88 0 0 chr17 93290818 93290954 -1981697 + B1_Mus1 SINE Alu 1 136 -12 4 1296 246 32 0 0 chr17 93290954 93290985 -1981666 + (CAAA)n Simple_repeat Simple_repeat 3 33 0 4 1296 1091 88 0 0 chr17 93290985 93290996 -1981655 + B1_Mus1 SINE Alu 137 147 -1 4 1296 21551 126 18 12 chr17 93290996 93292080 -1980571 + MERVK26-int LTR ERVK 2845 3940 -2979 4 1296 4483 160 51 37 chr17 93292080 93293020 -1979631 - RMER17B LTR ERVK 0 958 6 4 1296 14701 117 14 13 chr17 93293032 93295222 -1977429 + MERVK26-int LTR ERVK 3936 6127 -792 4 1296 6847 172 13 16 chr17 93295222 93296620 -1976031 - L1_Mur1 LINE L1 -2264 3622 2230 4 1296 282 148 0 0 chr17 93296689 93296743 -1975908 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 1296 602 181 99 145 chr17 93297393 93297697 -1974954 + Lx9 LINE L1 7354 7643 -1 4 1296 24 91 0 0 chr17 93297779 93297845 -1974806 + AT_rich Low_complexity Low_complexity 1 66 0 4 1296 4707 67 16 7 chr17 93298470 93299087 -1973564 + L1Md_F2 LINE L1 5948 6570 -12 4 1296 21 36 0 0 chr17 93299394 93299422 -1973229 + AT_rich Low_complexity Low_complexity 1 28 0 4 1296 270 388 81 0 chr17 93299465 93299625 -1973026 + MER5A DNA MER1_type 16 188 -1 4 1296 2848 193 115 17 chr17 93300203 93300337 -1972314 - RMER6A LTR ERVK -37 719 586 4 1296 216 0 0 0 chr17 93300337 93300361 -1972290 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 1296 2848 193 115 17 chr17 93300361 93300605 -1972046 - RMER6A LTR ERVK -171 585 317 4 1296 450 0 0 0 chr17 93300605 93300655 -1971996 + (TC)n Simple_repeat Simple_repeat 1 50 0 4 1296 2848 193 115 17 chr17 93300655 93300928 -1971723 - RMER6A LTR ERVK -440 316 6 4 1296 327 49 0 0 chr17 93300944 93300985 -1971666 + (TAG)n Simple_repeat Simple_repeat 1 41 0 4 1296 43 0 0 0 chr17 93300985 93301028 -1971623 + AT_rich Low_complexity Low_complexity 1 43 0 4 1296 291 201 45 29 chr17 93301095 93301410 -1971241 + (TATAA)n Simple_repeat Simple_repeat 1 320 0 4 1296 223 115 0 47 chr17 93303314 93303378 -1969273 + T-rich Low_complexity Low_complexity 1 61 0 4 1296 22577 194 44 17 chr17 93304208 93305402 -1967249 + L1VL4 LINE L1 594 1891 -3992 4 1296 189 0 0 0 chr17 93305402 93305423 -1967228 + (AGATG)n Simple_repeat Simple_repeat 3 23 0 4 1296 22577 170 27 27 chr17 93305423 93308225 -1964426 + L1VL4 LINE L1 1892 4677 -1206 4 1296 4900 65 0 8 chr17 93308225 93308859 -1963792 + L1Md_F2 LINE L1 5942 6570 -12 4 1296 22577 170 27 27 chr17 93308859 93308963 -1963688 + L1VL4 LINE L1 4678 4755 -1128 4 1296 189 0 0 0 chr17 93308963 93308984 -1963667 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 1296 22577 170 27 27 chr17 93308984 93310089 -1962562 + L1VL4 LINE L1 4756 5843 -40 4 1296 875 271 50 121 chr17 93310089 93310186 -1962465 - RMER5 LTR ERV1 -233 301 220 4 1296 899 69 129 8 chr17 93310186 93310318 -1962333 + B1_Mus1 SINE Alu 1 148 0 4 1296 875 271 50 121 chr17 93310318 93310518 -1962133 - RMER5 LTR ERV1 -315 219 25 4 1296 454 274 91 0 chr17 93312020 93312228 -1960423 + Lx9 LINE L1 7411 7637 -7 4 1296 232 102 41 0 chr17 93313070 93313119 -1959532 + (TA)n Simple_repeat Simple_repeat 2 52 0 4 1296 369 0 0 0 chr17 93313119 93313159 -1959492 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1296 235 399 71 48 chr17 93313245 93313750 -1958901 - L2 LINE L2 -353 3066 2550 4 1296 457 122 63 29 chr17 93314524 93314629 -1958022 + BGLII LTR ERVK 179 288 -134 4 1296 633 53 0 0 chr17 93314639 93314734 -1957917 - L1Md_F3 LINE L1 -14 6570 6476 4 1296 7017 53 6 1 chr17 93314734 93315810 -1956841 - L1Md_F3 LINE L1 -526 6058 4980 4 1296 1335 109 15 0 chr17 93315843 93316045 -1956606 - BGLII LTR ERVK -216 205 1 4 1296 3207 208 34 51 chr17 93316046 93317147 -1955504 - RMER3D-int LTR ERVK -1 2841 1532 4 1296 1735 177 108 9 chr17 93317179 93317662 -1954989 - RMER3D-int LTR ERVK -1309 1533 1015 4 1296 1326 22 0 38 chr17 93317712 93317897 -1954754 + (TTTCC)n Simple_repeat Simple_repeat 3 180 0 4 1296 805 108 37 19 chr17 93317899 93318060 -1954591 + CT-rich Low_complexity Low_complexity 5 168 0 4 1296 493 155 34 4 chr17 93318060 93318179 -1954472 - RMER3D-int LTR ERVK -2259 583 487 4 1296 734 185 0 47 chr17 93318309 93318502 -1954149 - RMER3D-int LTR ERVK -1991 851 668 4 1296 313 254 8 26 chr17 93318502 93318619 -1954032 - RMER3D-int LTR ERVK -2400 442 328 4 1296 2899 106 10 0 chr17 93318999 93319414 -1953237 - BGLII LTR ERVK -2 419 1 4 1296 506 281 109 34 chr17 93319582 93319821 -1952830 + RLTR15 LTR ERVK 62 318 -41 4 1296 3787 146 38 23 chr17 93320574 93321238 -1951413 - Lx LINE L1 0 6654 5981 4 1296 3671 192 67 51 chr17 93321238 93321997 -1950654 + L1VL4 LINE L1 16 807 -5495 4 1296 2436 75 0 65 chr17 93321997 93322368 -1950283 + L1_Mus2 LINE L1 6220 6566 0 4 1296 3671 82 14 10 chr17 93322368 93322649 -1950002 + L1VL4 LINE L1 808 1071 -2488 4 1297 812 174 58 6 chr17 93323889 93324045 -1948606 - RMER1B Other Other -188 878 715 4 1297 532 214 23 15 chr17 93324044 93324177 -1948474 + RMER1B Other Other 908 1041 -25 4 1297 828 44 7 0 chr17 93324303 93324410 -1948241 + L1Md_A LINE L1 5496 5615 -559 4 1297 8707 19 0 0 chr17 93324410 93325406 -1947245 + L1Md_A LINE L1 5587 6582 0 4 1297 352 343 88 29 chr17 93326817 93326987 -1945664 + MER58A DNA MER1_type 12 191 -33 4 1297 2138 196 68 34 chr17 93326987 93327578 -1945073 - RMER6A LTR ERVK 0 756 146 4 1297 431 137 0 0 chr17 93328309 93328382 -1944269 + L1_Mus2 LINE L1 6490 6562 -4 4 1297 1400 249 50 95 chr17 93329016 93329633 -1943018 + L1_Mur3 LINE L1 1986 2577 -3303 4 1297 2736 217 56 24 chr17 93329633 93329956 -1942695 + RMER6D LTR ERVK 1 347 -373 4 1297 653 0 13 0 chr17 93329956 93330033 -1942618 + (GA)n Simple_repeat Simple_repeat 1 78 0 4 1297 2736 217 56 24 chr17 93330033 93330407 -1942244 + RMER6D LTR ERVK 348 719 -1 4 1297 1400 249 50 95 chr17 93330407 93330473 -1942178 + L1_Mur3 LINE L1 2578 2638 -3242 4 1297 490 237 8 8 chr17 93331547 93331679 -1940972 + Lx9 LINE L1 7505 7636 -8 4 1297 203 119 48 0 chr17 93331680 93331722 -1940929 + (CAA)n Simple_repeat Simple_repeat 2 45 0 4 1297 6666 151 2 3 chr17 93335399 93337019 -1935632 - L1_Mus4 LINE L1 -8 6628 5010 4 1297 198 0 0 0 chr17 93337367 93337389 -1935262 + (TA)n Simple_repeat Simple_repeat 1 22 0 4 1297 246 32 0 0 chr17 93337389 93337419 -1935232 + (GA)n Simple_repeat Simple_repeat 2 32 0 4 1297 5680 142 77 3 chr17 93337423 93338924 -1933727 + L1_Mur1 LINE L1 210 2160 -3726 4 1297 2197 111 9 0 chr17 93338921 93339255 -1933396 - L1_Mur1 LINE L1 -3394 2492 2156 4 1297 3203 103 99 4 chr17 93339255 93339760 -1932891 + Lx3_Mus LINE L1 6448 7000 -9 4 1297 1461 132 55 68 chr17 93339902 93340228 -1932423 - RLTRETN_Mm LTR ERVK 0 322 1 4 1297 9673 139 21 31 chr17 93340228 93342242 -1930409 - ETnERV-int LTR ERVK 0 4844 3219 4 1297 185 0 40 0 chr17 93342245 93342270 -1930381 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 4 1297 38889 35 1 6 chr17 93342272 93348283 -1924368 - L1Md_A LINE L1 -7 6575 606 4 1297 12901 189 22 16 chr17 93348753 93353630 -1919021 - ETnERV-int LTR ERVK -1837 5569 2 4 1297 1419 146 39 69 chr17 93353631 93353963 -1918688 - RLTRETN_Mm LTR ERVK 0 322 1 4 1297 2095 229 87 80 chr17 93355238 93355861 -1916790 + RMER20B LTR ERVK 1 627 0 5 1297 1230 246 45 52 chr17 93355966 93356369 -1916282 + MERVK26-int LTR ERVK 64 463 -6456 5 1297 227 301 0 0 chr17 93356371 93356444 -1916207 + (CA)n Simple_repeat Simple_repeat 1 73 0 5 1297 289 270 0 13 chr17 93357733 93357808 -1914843 + MERVK26-int LTR ERVK 5528 5601 -1318 5 1297 1471 310 43 33 chr17 93357972 93358615 -1914036 + MERVK26-int LTR ERVK 6223 6872 -47 5 1297 9565 168 8 2 chr17 93358629 93358719 -1913932 + L1_Mm LINE L1 3392 3481 -2402 5 1297 843 10 0 0 chr17 93358719 93358815 -1913836 + (GAA)n Simple_repeat Simple_repeat 2 97 0 5 1297 9565 168 8 2 chr17 93358815 93360437 -1912214 + L1_Mm LINE L1 3482 5114 -769 5 1297 3315 138 15 2 chr17 93360439 93360968 -1911683 + L1_Mus4 LINE L1 6100 6635 -1 5 1297 1557 241 16 134 chr17 93360988 93361496 -1911155 + RMER20B LTR ERVK 1 448 -179 5 1297 1980 21 0 0 chr17 93361502 93361735 -1910916 - L1Md_T LINE L1 -607 5975 5743 5 1297 4950 41 0 0 chr17 93361735 93362324 -1910327 + L1Md_T LINE L1 5993 6581 -1 5 1297 748 207 6 35 chr17 93362389 93362559 -1910092 + RMER20B LTR ERVK 463 627 0 5 1297 2191 213 89 56 chr17 93362595 93363181 -1909470 - RMER1B Other Other -38 1028 424 5 1297 1195 52 0 0 chr17 93363210 93363363 -1909288 - L1_Mus1 LINE L1 0 6567 6415 5 1297 198 0 0 0 chr17 93363425 93363447 -1909204 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 5 1297 324 281 47 116 chr17 93363481 93363610 -1909041 - B2_Mm1t SINE B2 -63 130 11 5 1297 22 35 0 0 chr17 93364133 93364162 -1908489 + AT_rich Low_complexity Low_complexity 1 29 0 5 1297 577 288 13 104 chr17 93364289 93364404 -1908247 - Lx7 LINE L1 -284 7412 7305 5 1297 315 0 0 0 chr17 93364404 93364439 -1908212 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1297 577 288 13 104 chr17 93364439 93364621 -1908030 - Lx7 LINE L1 -392 7304 7142 5 1297 14878 119 14 22 chr17 93364616 93367057 -1905594 - Lx3_Mus LINE L1 -215 6794 4346 5 1297 200 31 0 59 chr17 93367057 93367091 -1905560 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 5 1297 14878 116 12 33 chr17 93367091 93367200 -1905451 - Lx3_Mus LINE L1 -1541 4345 4290 5 1297 1152 68 0 0 chr17 93367200 93367347 -1905304 - B1_Mus1 SINE Alu 0 148 2 5 1297 14878 116 12 33 chr17 93367347 93368141 -1904510 - Lx3_Mus LINE L1 -1597 4289 3485 5 1297 3425 42 7 0 chr17 93368195 93368619 -1904032 - L1Md_F2 LINE L1 -1 6581 6155 5 1297 5634 65 17 0 chr17 93368619 93368704 -1903947 + L1Md_F2 LINE L1 5150 5234 -649 5 1297 423 0 0 0 chr17 93368704 93368751 -1903900 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 1297 5634 51 6 3 chr17 93368751 93369674 -1902977 + L1Md_F2 LINE L1 5235 6167 -415 5 1297 10816 142 52 9 chr17 93369672 93372448 -1900203 - Lx3_Mus LINE L1 -2402 3475 238 5 1297 1768 189 54 67 chr17 93373993 93374098 -1898553 - RLTR20B3 LTR ERVK 0 577 472 5 1297 351 0 0 0 chr17 93374098 93374137 -1898514 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1297 1768 200 63 67 chr17 93374137 93374548 -1898103 - RLTR20B3 LTR ERVK -106 471 21 5 1297 819 31 0 0 chr17 93374744 93374842 -1897809 + (GA)n Simple_repeat Simple_repeat 1 98 0 5 1297 396 0 0 0 chr17 93376379 93376423 -1896228 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1297 1321 335 31 40 chr17 93376457 93377141 -1895510 + Lx9 LINE L1 6359 7036 -608 5 1297 1221 48 0 0 chr17 93377215 93377361 -1895290 - B1_Mm SINE Alu 0 147 2 5 1297 727 269 46 21 chr17 93377582 93377821 -1894830 + Lx9 LINE L1 6894 7138 -506 5 1297 3541 72 13 42 chr17 93379304 93379827 -1892824 - L1_Mus2 LINE L1 0 6566 6059 5 1297 396 0 0 0 chr17 93380458 93380502 -1892149 + (TTATA)n Simple_repeat Simple_repeat 5 48 0 5 1297 419 394 92 32 chr17 93382567 93382913 -1889738 + MLT1E3 LTR MaLR 154 520 -104 5 1297 814 252 39 82 chr17 93383732 93383965 -1888686 + RLTR30 LTR ERV1 1 223 -156 5 1297 1045 221 56 28 chr17 93383965 93384249 -1888402 - RMER16 LTR ERVK 0 533 242 5 1297 866 140 53 0 chr17 93384367 93384517 -1888134 + RLTR30 LTR ERV1 216 373 -6 5 1297 447 299 43 34 chr17 93384760 93384963 -1887688 + ORR1B2 LTR MaLR 52 265 -119 5 1297 28276 82 2 13 chr17 93384963 93391212 -1881439 - L1Md_F2 LINE L1 -79 6503 321 5 1297 640 245 109 19 chr17 93391212 93391469 -1881182 + ORR1C1 LTR MaLR 103 373 -1 5 1297 243 0 0 0 chr17 93391587 93391614 -1881037 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1297 291 54 0 0 chr17 93391658 93391695 -1880956 + (TTA)n Simple_repeat Simple_repeat 2 38 0 5 1297 557 201 90 37 chr17 93391713 93391847 -1880804 - B1_Mur2 SINE Alu 0 149 9 5 1297 315 0 0 0 chr17 93392109 93392144 -1880507 + (TTG)n Simple_repeat Simple_repeat 2 36 0 5 1297 207 0 0 0 chr17 93393065 93393088 -1879563 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 1297 2699 185 52 2 chr17 93393224 93393299 -1879352 - RLTR20C LTR ERVK -11 523 446 5 1297 306 0 0 0 chr17 93393299 93393333 -1879318 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 1297 2699 185 52 2 chr17 93393333 93393755 -1878896 - RLTR20C LTR ERVK -89 445 2 5 1297 1657 64 0 82 chr17 93393788 93394134 -1878517 - L1_Mus2 LINE L1 0 6566 6316 5 1297 323 58 0 55 chr17 93394137 93394192 -1878459 + (TTTTA)n Simple_repeat Simple_repeat 4 55 0 5 1297 402 21 0 0 chr17 93394198 93394245 -1878406 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1297 253 352 61 20 chr17 93395596 93395744 -1876907 - MLT1E1A LTR MaLR -180 500 347 5 1297 438 20 0 0 chr17 93395941 93395992 -1876659 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1297 288 0 0 0 chr17 93396691 93396723 -1875928 + (CAAAA)n Simple_repeat Simple_repeat 5 36 0 5 1297 1179 122 5 10 chr17 93396843 93397042 -1875609 + L1_Mur3 LINE L1 3817 4014 -1866 5 1297 2850 27 112 16 chr17 93397327 93397702 -1874949 + IAPLTR2a LTR ERVK 1 411 0 5 1297 278 295 161 28 chr17 93397754 93398002 -1874649 + MER58D DNA MER1_type 86 366 -20 5 1297 3504 116 4 0 chr17 93398274 93398785 -1873866 - L1_Mus4 LINE L1 -2 6634 6122 5 1297 583 312 33 28 chr17 93398895 93399106 -1873545 - MER2 DNA MER2_type -31 314 103 5 1297 601 22 44 0 chr17 93399294 93399384 -1873267 + L1Md_F3 LINE L1 6490 6583 -1 5 1297 3391 86 2 16 chr17 93400802 93401296 -1871355 - L1Md_F2 LINE L1 -1 6581 6095 5 1297 40 49 0 0 chr17 93401723 93401784 -1870867 + AT_rich Low_complexity Low_complexity 1 61 0 5 1297 207 211 0 0 chr17 93402923 93402961 -1869690 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1297 21 36 0 0 chr17 93403259 93403287 -1869364 + AT_rich Low_complexity Low_complexity 1 28 0 5 1297 324 222 0 0 chr17 93403733 93403841 -1868810 + CT-rich Low_complexity Low_complexity 1 108 0 5 1297 230 374 38 93 chr17 93403963 93404146 -1868505 - B4 SINE B4 -113 179 7 5 1297 204 122 0 0 chr17 93404208 93404249 -1868402 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 5 1297 21 57 0 0 chr17 93404264 93404299 -1868352 + AT_rich Low_complexity Low_complexity 1 35 0 5 1297 23 33 0 0 chr17 93404340 93404370 -1868281 + AT_rich Low_complexity Low_complexity 1 30 0 5 1297 35 24 0 0 chr17 93404477 93404519 -1868132 + AT_rich Low_complexity Low_complexity 1 42 0 5 1297 226 314 190 22 chr17 93405152 93405331 -1867320 - MLT1F1 LTR MaLR -57 512 304 5 1297 493 216 7 7 chr17 93405490 93405630 -1867021 + (TA)n Simple_repeat Simple_repeat 1 140 0 5 1297 959 316 56 46 chr17 93405631 93406241 -1866410 - Lx9 LINE L1 -128 7516 6901 5 1297 959 231 60 20 chr17 93406244 93406545 -1866106 + L1_Rod LINE L1 5262 5574 -273 5 1297 30 27 0 0 chr17 93407796 93407833 -1864818 + AT_rich Low_complexity Low_complexity 1 37 0 5 1297 204 122 0 0 chr17 93409673 93409714 -1862937 + (GA)n Simple_repeat Simple_repeat 1 41 0 5 1297 286 177 40 30 chr17 93410175 93410274 -1862377 + T-rich Low_complexity Low_complexity 3 102 0 5 1297 23 0 0 0 chr17 93410445 93410468 -1862183 + AT_rich Low_complexity Low_complexity 1 23 0 5 1297 4631 135 78 60 chr17 93411171 93412865 -1859786 - L1VL2 LINE L1 -3812 2071 362 5 1297 245 258 15 0 chr17 93412872 93412938 -1859713 + MTEb LTR MaLR 289 355 -24 5 1297 14443 95 28 94 chr17 93413095 93414076 -1858575 + L1Md_F LINE L1 522 1511 -4372 5 1297 521 256 188 54 chr17 93414076 93414316 -1858335 + RLTR10A LTR ERVK 140 411 0 5 1297 14443 95 28 94 chr17 93414316 93416315 -1856336 + L1Md_F LINE L1 1512 3532 -2351 5 1297 4333 14 2 12 chr17 93416315 93416813 -1855838 - MT2_Mm LTR ERVL 0 493 1 5 1297 314 0 0 0 chr17 93416813 93416851 -1855800 - MERVL-int LTR ERVL 0 5485 5448 5 1297 392 167 46 35 chr17 93416851 93416938 -1855713 - ORR1A3-int LTR MaLR -1323 640 553 5 1297 47376 15 6 0 chr17 93416938 93422264 -1850387 - MERVL-int LTR ERVL -125 5360 1 5 1297 4333 14 2 12 chr17 93422264 93422762 -1849889 - MT2_Mm LTR ERVL 0 493 1 5 1297 15267 75 1 10 chr17 93422762 93424839 -1847812 + L1Md_F2 LINE L1 3528 5586 -297 5 1297 7170 87 4 6 chr17 93424840 93425827 -1846824 + L1Md_F2 LINE L1 5588 6572 -10 5 1297 412 315 65 26 chr17 93426122 93426428 -1846223 + L1_Mur3 LINE L1 5191 5508 -372 5 1297 4262 213 60 9 chr17 93426419 93427540 -1845111 + L1_Mur2 LINE L1 2603 3780 -2097 5 1297 2719 212 24 2 chr17 93427546 93428084 -1844567 - L1_Mur2 LINE L1 -5977 735 186 5 1297 5908 205 26 30 chr17 93428085 93429573 -1843078 - L1_Mur2 LINE L1 -584 5293 3812 5 1297 7199 170 26 38 chr17 93429573 93430135 -1842516 + L1_Mur2 LINE L1 1133 1716 -4161 5 1297 1109 88 0 0 chr17 93430135 93430283 -1842368 + B1_Mus1 SINE Alu 1 148 0 5 1297 7199 165 27 43 chr17 93430283 93431331 -1841320 + L1_Mur2 LINE L1 1717 2718 -3159 5 1297 1789 177 45 10 chr17 93431343 93431742 -1840909 + MYSERV16_I-int LTR ERVK 1830 2242 -84 5 1297 219 36 0 0 chr17 93431782 93431810 -1840841 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 5 1297 394 352 90 50 chr17 93431861 93432160 -1840491 + RLTR17 LTR ERVK 115 425 -267 5 1297 38238 40 0 3 chr17 93432611 93438910 -1833741 - L1Md_T LINE L1 0 6585 207 5 1297 599 357 53 78 chr17 93440181 93441138 -1831513 - RodERV21-int LTR ERV1 -1189 3802 2870 5 1297 195 100 0 0 chr17 93442496 93442526 -1830125 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 5 1297 291 279 42 49 chr17 93442797 93442940 -1829711 - MER52-int LTR ERV1 -3113 3978 3837 5 1297 618 176 0 0 chr17 93443127 93443229 -1829422 - ORR1A2 LTR MaLR -225 102 1 5 1297 5278 145 31 65 chr17 93443229 93444075 -1828576 - ORR1A2-int LTR MaLR 0 1963 1094 5 1297 1032 156 0 0 chr17 93444075 93444255 -1828396 + CT-rich Low_complexity Low_complexity 1 180 0 5 1297 5278 145 31 65 chr17 93444255 93444301 -1828350 - ORR1A2-int LTR MaLR -870 1093 1085 5 1297 1098 95 0 33 chr17 93444301 93444454 -1828197 - B1_Mus1 SINE Alu 0 148 1 5 1297 5278 145 31 65 chr17 93444454 93444565 -1828086 - ORR1A2-int LTR MaLR -879 1084 993 5 1297 2061 128 45 0 chr17 93444591 93444904 -1827747 - ORR1A2 LTR MaLR 0 327 1 5 1297 1334 286 32 11 chr17 93444904 93445275 -1827376 - RodERV21-int LTR ERV1 -3115 1876 1498 5 1297 226 203 51 0 chr17 93445304 93445363 -1827288 + Charlie12 DNA MER1_type 317 378 -2495 5 1297 755 286 28 40 chr17 93445519 93445770 -1826881 - RodERV21-int LTR ERV1 -3906 1085 838 5 1297 564 42 0 0 chr17 93445772 93445843 -1826808 + (TTAGGG)n Simple_repeat Simple_repeat 6 76 0 5 1297 566 28 14 0 chr17 93446226 93446298 -1826353 + (GA)n Simple_repeat Simple_repeat 2 74 0 5 1297 382 307 57 35 chr17 93448338 93448652 -1823999 + L1MA6 LINE L1 5605 5925 -375 5 1297 239 93 0 23 chr17 93449368 93449412 -1823239 + (TTA)n Simple_repeat Simple_repeat 3 45 0 6 1297 228 188 0 59 chr17 93449635 93449686 -1822965 + MTE2a LTR MaLR 278 325 -54 6 1297 477 0 0 0 chr17 93449864 93449917 -1822734 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1297 2369 158 38 7 chr17 93449976 93450397 -1822254 + BGLII_B LTR ERVK 1 434 -7 6 1297 1045 20 27 7 chr17 93450833 93450982 -1821669 + (TAGA)n Simple_repeat Simple_repeat 3 154 0 6 1297 384 294 88 14 chr17 93451872 93452020 -1820631 + RMER6-int LTR ERVK 802 960 -2217 6 1297 4052 131 17 8 chr17 93452144 93452797 -1819854 - L1_Mus3 LINE L1 -2 6636 5978 6 162 17487 177 128 31 chr17 93452821 93457714 -1814937 - L1VL1 LINE L1 0 5886 498 6 1298 392 242 77 0 chr17 93457765 93457856 -1814795 - B3A SINE B2 -98 100 3 6 1298 1761 57 9 4 chr17 93459493 93459723 -1812928 - L1Md_F3 LINE L1 0 6584 6354 6 1298 1752 39 0 0 chr17 93459723 93459931 -1812720 + L1Md_F3 LINE L1 6126 6333 -251 6 1298 351 0 0 0 chr17 93460351 93460390 -1812261 + (TA)n Simple_repeat Simple_repeat 2 40 0 6 1298 263 50 65 32 chr17 93460532 93460594 -1812057 + (CAAA)n Simple_repeat Simple_repeat 2 65 0 6 1298 300 237 0 0 chr17 93461553 93461629 -1811022 + (TGG)n Simple_repeat Simple_repeat 1 76 0 6 1298 218 365 10 10 chr17 93461912 93462009 -1810642 + L2 LINE L2 2764 2860 -559 6 1298 560 343 67 29 chr17 93462584 93462824 -1809827 + MLT1A LTR MaLR 1 249 -125 6 1298 228 100 0 0 chr17 93462870 93462910 -1809741 + (A)n Simple_repeat Simple_repeat 1 40 0 6 1298 202 170 43 0 chr17 93462949 93462996 -1809655 + T-rich Low_complexity Low_complexity 2 50 0 6 1298 1712 180 100 17 chr17 93463980 93463998 -1808653 - RLTR17 LTR ERVK 0 692 675 6 1298 1111 68 18 12 chr17 93463998 93464163 -1808488 + (GGAGAA)n Simple_repeat Simple_repeat 3 168 0 6 1298 1712 180 100 17 chr17 93464163 93464495 -1808156 - RLTR17 LTR ERVK -18 674 313 6 1298 949 65 48 0 chr17 93464496 93464620 -1808031 + B1_Mm SINE Alu 1 130 -17 6 1298 266 368 110 7 chr17 93464683 93464815 -1807836 + RSINE1 SINE B4 6 152 -13 6 1298 459 0 0 0 chr17 93464815 93464866 -1807785 + (TA)n Simple_repeat Simple_repeat 1 51 0 6 1298 266 368 110 7 chr17 93464866 93464878 -1807773 + RSINE1 SINE B4 153 164 -1 6 1298 2520 79 42 11 chr17 93465073 93465430 -1807221 + L1_Mus1 LINE L1 6200 6567 0 6 1298 511 341 67 0 chr17 93465637 93465816 -1806835 + B3 SINE B2 1 191 -25 6 1298 507 17 0 0 chr17 93465834 93465894 -1806757 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 6 1298 23 0 0 0 chr17 93465926 93465949 -1806702 + AT_rich Low_complexity Low_complexity 1 23 0 6 1298 406 298 26 9 chr17 93465971 93466086 -1806565 - Lx9 LINE L1 -860 6784 6668 6 1298 261 240 40 40 chr17 93466089 93466189 -1806462 + Lx9 LINE L1 7522 7621 -23 6 1298 336 227 21 0 chr17 93466645 93466742 -1805909 - Lx9 LINE L1 -20 7624 7526 6 1298 486 0 0 0 chr17 93466930 93466984 -1805667 + (TC)n Simple_repeat Simple_repeat 2 55 0 6 1298 575 324 16 31 chr17 93467040 93467315 -1805336 - SRV_MM-int LTR ERVK -3417 2750 2521 6 1298 660 186 0 0 chr17 93467322 93467446 -1805205 - RLTR45-int LTR ERVK -6552 692 569 6 1298 204 250 0 42 chr17 93467997 93468068 -1804583 + G-rich Low_complexity Low_complexity 5 72 0 6 1298 1292 274 11 6 chr17 93468368 93468727 -1803924 - RLTR45-int LTR ERVK -6710 534 174 6 1298 2914 52 0 0 chr17 93468727 93469091 -1803560 - L1Md_F2 LINE L1 -597 5987 5624 6 1298 4671 50 9 0 chr17 93469091 93469665 -1802986 + L1Md_F2 LINE L1 5985 6563 -19 6 1298 180 0 0 0 chr17 93469671 93469691 -1802960 + (GAAA)n Simple_repeat Simple_repeat 2 21 0 6 1298 309 244 87 47 chr17 93469692 93469864 -1802787 - RLTR45-int LTR ERVK -7065 179 1 6 1298 582 291 58 10 chr17 93469864 93470072 -1802579 - RLTR45 LTR ERVK 0 482 265 6 1298 921 128 0 0 chr17 93470325 93470473 -1802178 + RLTR19 LTR ERVK 34 181 -318 6 1298 7275 182 33 21 chr17 93470481 93471876 -1800775 - Lx2 LINE L1 0 6997 5587 6 1298 1948 138 9 3 chr17 93471893 93472221 -1800430 - MusHAL1 LINE L1 -1500 1212 883 6 1298 259 252 92 67 chr17 93472220 93472339 -1800312 - L1VL2 LINE L1 -6087 248 127 6 1298 5739 206 48 13 chr17 93472341 93473976 -1798675 + L1_Mur2 LINE L1 1048 2744 -3133 6 1298 13229 64 9 3 chr17 93473981 93475708 -1796943 + L1_Mm LINE L1 3963 5698 -185 6 1298 5360 72 0 9 chr17 93475706 93476441 -1796210 + L1Md_F2 LINE L1 5872 6582 0 6 1298 7306 192 84 14 chr17 93476442 93478073 -1794578 + L1_Mur2 LINE L1 3451 5195 -682 6 1298 26 0 0 0 chr17 93478101 93478127 -1794524 + AT_rich Low_complexity Low_complexity 1 26 0 6 1298 1102 103 0 0 chr17 93478436 93478582 -1794069 + B1_Mus1 SINE Alu 1 146 -2 6 1298 640 310 101 35 chr17 93479127 93479369 -1793282 - L1MC2 LINE L1 -146 6198 5934 6 1298 285 29 0 0 chr17 93479369 93479403 -1793248 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 1298 640 310 101 35 chr17 93479403 93479675 -1792976 - L1MC2 LINE L1 -411 5933 5650 6 1298 400 376 23 12 chr17 93481343 93481515 -1791136 + B4 SINE B4 84 257 -35 6 1298 3546 138 18 0 chr17 93481541 93482100 -1790551 - L1_Mm LINE L1 0 5883 5315 6 1298 452 56 28 0 chr17 93482165 93482236 -1790415 + (CAGA)n Simple_repeat Simple_repeat 4 76 0 6 1298 18829 174 30 15 chr17 93482483 93487300 -1785351 - Lx LINE L1 -17 6637 1775 6 1298 760 209 7 0 chr17 93487409 93487548 -1785103 + B1_Mur3 SINE Alu 1 140 -9 6 1298 201 100 48 48 chr17 93487548 93487590 -1785061 + (CAGAGA)n Simple_repeat Simple_repeat 1 42 0 6 1298 23 33 0 0 chr17 93488084 93488114 -1784537 + AT_rich Low_complexity Low_complexity 1 30 0 6 1298 1168 81 35 0 chr17 93488713 93488885 -1783766 - B2_Mm1t SINE B2 -2 191 14 6 1298 351 0 0 0 chr17 93488885 93488924 -1783727 + (TC)n Simple_repeat Simple_repeat 2 40 0 6 1298 346 243 65 86 chr17 93489285 93489545 -1783106 + L1_Mur1 LINE L1 518 753 -6231 6 1298 5683 167 24 16 chr17 93489545 93491227 -1781424 + L1_Mur1 LINE L1 702 2392 -3494 6 1298 318 355 67 43 chr17 93491491 93491744 -1780907 - MLT2D LTR ERVL -69 345 87 6 1298 232 286 87 26 chr17 93491890 93492005 -1780646 - MLT1A LTR MaLR -5 369 248 6 1298 787 42 24 24 chr17 93492283 93492406 -1780245 - L1Md_F3 LINE L1 -2 6582 6460 6 1298 259 175 38 0 chr17 93492727 93492807 -1779844 + CT-rich Low_complexity Low_complexity 2 84 0 6 1298 1400 100 9 9 chr17 93493196 93493408 -1779243 - L1_Mus3 LINE L1 -7 6631 6420 6 1298 5038 143 11 7 chr17 93493633 93494444 -1778207 - Lx2A LINE L1 0 7008 6195 6 1298 654 232 14 114 chr17 93494477 93494696 -1777955 + Lx4B LINE L1 6862 7058 0 6 1298 269 68 23 0 chr17 93495078 93495122 -1777529 + (TTTTTG)n Simple_repeat Simple_repeat 2 46 0 6 1298 23 33 0 0 chr17 93495461 93495491 -1777160 + AT_rich Low_complexity Low_complexity 1 30 0 6 1298 343 363 81 41 chr17 93495895 93496116 -1776535 + RMER15 LTR ERVL 276 505 -70 6 1298 189 0 0 0 chr17 93496303 93496324 -1776327 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 1298 423 0 0 0 chr17 93496324 93496370 -1776281 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 1298 277 224 0 0 chr17 93497497 93497555 -1775096 + ORR1D1 LTR MaLR 313 370 0 6 1298 3082 276 50 24 chr17 93497556 93497806 -1774845 + ORR1D1-int LTR MaLR 2 256 -1114 6 1298 522 43 0 0 chr17 93497806 93497875 -1774776 + (GAAA)n Simple_repeat Simple_repeat 1 69 0 6 1298 3082 276 50 24 chr17 93497875 93498536 -1774115 + ORR1D1-int LTR MaLR 257 937 -433 6 1298 353 244 22 11 chr17 93498522 93498613 -1774038 + ORR1D1 LTR MaLR 283 374 0 6 1298 1047 355 39 2 chr17 93498785 93499192 -1773459 + RMER15-int LTR ERVL 922 1343 -3656 6 1298 1891 184 145 5 chr17 93499555 93499982 -1772669 + RLTR31A_Mm LTR ERVK 1 487 -97 6 1298 30 59 0 0 chr17 93500219 93500270 -1772381 + AT_rich Low_complexity Low_complexity 1 51 0 1 1298 1047 323 78 27 chr17 93500509 93501062 -1771589 + RMER15-int LTR ERVL 4157 4737 -262 2 1298 237 65 0 0 chr17 93501379 93501410 -1771241 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1298 4176 58 0 0 chr17 93502185 93502722 -1769929 - L1_Mus1 LINE L1 -196 6371 5835 4 1298 1740 85 0 0 chr17 93502722 93503015 -1769636 + L1_Mus1 LINE L1 6332 6567 0 4 1298 9298 174 24 29 chr17 93504419 93507771 -1764880 - Lx2 LINE L1 -6 6991 3668 5 1298 485 46 41 6 chr17 93507771 93507857 -1764794 - L1VL4 LINE L1 -697 3217 3128 6 1298 6092 162 17 13 chr17 93507861 93509775 -1762876 - L1VL4 LINE L1 -1444 2470 550 6 1298 643 227 6 11 chr17 93510584 93510758 -1761893 - L1_Mur3 LINE L1 -1 5879 5707 7 1298 2017 243 16 16 chr17 93510761 93511597 -1761054 - Lx6 LINE L1 -1253 6207 5364 8 1298 712 289 79 14 chr17 93511594 93512008 -1760643 + Lx6 LINE L1 6512 6894 -566 9 1298 715 265 29 20 chr17 93512045 93512249 -1760402 + Lx6 LINE L1 7161 7366 -94 9 1298 375 23 0 0 chr17 93512637 93512681 -1759970 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1298 21 57 0 0 chr17 93512681 93512716 -1759935 + AT_rich Low_complexity Low_complexity 1 35 0 1 1298 4699 109 9 0 chr17 93512926 93513490 -1759161 - L1_Mur1 LINE L1 -3907 1979 1414 1 1298 315 0 0 0 chr17 93513490 93513525 -1759126 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1 1298 4699 163 160 9 chr17 93513525 93514664 -1757987 - L1_Mur1 LINE L1 -4473 1413 76 1 1298 4568 131 27 11 chr17 93515167 93515899 -1756752 - Lx LINE L1 0 6654 5911 1 1298 22 0 0 0 chr17 93517087 93517109 -1755542 + AT_rich Low_complexity Low_complexity 1 22 0 1 1298 195 42 0 0 chr17 93517282 93517306 -1755345 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1298 21 36 0 0 chr17 93517582 93517610 -1755041 + AT_rich Low_complexity Low_complexity 1 28 0 1 1298 708 12 0 0 chr17 93517739 93517820 -1754831 + (GA)n Simple_repeat Simple_repeat 2 82 0 1 1298 4360 237 61 18 chr17 93517953 93519758 -1752893 - Lx5 LINE L1 -8 7042 5059 1 1298 711 78 0 0 chr17 93519758 93519861 -1752790 + (TA)n Simple_repeat Simple_repeat 2 104 0 2 1298 4360 203 93 32 chr17 93519861 93520091 -1752560 - Lx5 LINE L1 -819 5058 4825 1 1298 1181 62 7 0 chr17 93520091 93520237 -1752414 + B1_Mus1 SINE Alu 2 148 0 2 1298 4360 203 93 32 chr17 93520237 93520528 -1752123 - Lx5 LINE L1 -1053 4824 4543 1 1298 401 266 64 8 chr17 93520530 93520618 -1752033 - ORR1D1 LTR MaLR -86 288 194 2 1298 526 287 0 47 chr17 93520618 93520790 -1751861 - RNLTR23 LTR ERVK 0 642 479 2 1298 505 359 5 27 chr17 93521046 93521232 -1751419 - ORR1D1 LTR MaLR -141 233 52 2 1298 282 236 18 26 chr17 93521232 93521345 -1751306 + (TA)n Simple_repeat Simple_repeat 1 112 0 2 1298 240 86 0 0 chr17 93521367 93521402 -1751249 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1298 333 0 0 0 chr17 93521402 93521438 -1751213 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 1298 1667 185 60 49 chr17 93521649 93521761 -1750890 - L1_Mur2 LINE L1 -483 5394 5283 2 1298 1005 180 26 0 chr17 93521761 93521950 -1750701 - B2_Mm2 SINE B2 0 195 2 2 1298 1667 175 291 44 chr17 93521950 93522301 -1750350 - L1_Mur2 LINE L1 -595 5282 4843 2 1298 2526 111 54 15 chr17 93522302 93522694 -1749957 - MTB_Mm LTR MaLR 0 407 1 3 1298 5449 155 90 20 chr17 93522694 93523775 -1748876 - MTB_Mm-int LTR MaLR -7 1251 96 3 1298 1611 173 50 3 chr17 93523775 93523981 -1748670 - L1_Mur2 LINE L1 -1032 4845 4641 2 1298 206 62 31 0 chr17 93523981 93524013 -1748638 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 1298 1611 173 50 3 chr17 93524013 93524125 -1748526 - L1_Mur2 LINE L1 -1237 4640 4513 2 1298 5609 216 29 13 chr17 93524122 93525755 -1746896 + Lx5 LINE L1 5376 7047 -3 3 1298 1158 78 0 0 chr17 93525780 93525921 -1746730 + B1_Mus2 SINE Alu 2 142 -5 3 1298 871 70 8 8 chr17 93525922 93526051 -1746600 + (GAGAA)n Simple_repeat Simple_repeat 4 132 0 3 1298 452 308 21 110 chr17 93526056 93526392 -1746259 - Lx7 LINE L1 -376 7320 7015 3 1298 180 70 45 23 chr17 93526415 93526459 -1746192 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 3 1298 225 276 27 20 chr17 93526995 93527143 -1745508 + L1M5 LINE L1 5739 5887 -286 3 1298 31 26 0 0 chr17 93527190 93527228 -1745423 + AT_rich Low_complexity Low_complexity 1 38 0 3 1298 11516 60 3 1 chr17 93527342 93529584 -1743067 - L1Md_F2 LINE L1 -2 6580 4334 3 1298 7391 117 8 15 chr17 93529723 93531643 -1741008 + L1Md_F2 LINE L1 446 2325 -3558 4 1298 2200 77 0 0 chr17 93531638 93531935 -1740716 + L1Md_F2 LINE L1 5290 5586 -297 4 1298 7547 56 29 1 chr17 93531936 93532904 -1739747 + L1Md_F2 LINE L1 5588 6582 0 4 1298 226 243 53 26 chr17 93533002 93533116 -1739535 + L1M5 LINE L1 5783 5899 -274 4 1298 183 139 0 0 chr17 93533971 93534007 -1738644 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 4 1298 23471 137 60 8 chr17 93534019 93539677 -1732974 - L1_Mus3 LINE L1 -7 6631 658 4 1298 271 335 41 74 chr17 93540413 93540593 -1732058 + MIR3 SINE MIR 17 177 -31 4 1298 584 210 89 0 chr17 93541574 93541698 -1730953 + B1_Mur3 SINE Alu 5 139 -10 4 1298 303 38 37 19 chr17 93541698 93541752 -1730899 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 4 1298 757 261 48 15 chr17 93541791 93541997 -1730654 + B3 SINE B2 4 216 0 4 1298 3060 62 0 5 chr17 93542209 93542601 -1730050 - L1Md_F2 LINE L1 -12 6570 6181 4 1298 1681 79 42 0 chr17 93542601 93542841 -1729810 + L1Md_F2 LINE L1 5934 6183 -399 4 1298 1109 266 16 149 chr17 93542868 93543305 -1729346 - MTEa LTR MaLR 0 379 1 4 1298 344 250 79 57 chr17 93543739 93543879 -1728772 + RLTR23 LTR ERV1 286 428 -2 5 1298 347 200 40 0 chr17 93543882 93543957 -1728694 - ORR1B2 LTR MaLR -24 343 266 5 1298 7145 27 3 1 chr17 93543981 93544860 -1727791 - L1Md_F3 LINE L1 -2 6582 5702 5 1298 1048 183 95 14 chr17 93544860 93545082 -1727569 - ORR1B2 LTR MaLR -119 248 9 5 1298 237 309 112 20 chr17 93545593 93545745 -1726906 - MIRb SINE MIR -35 233 68 5 1298 1084 239 141 28 chr17 93545847 93546174 -1726477 - ORR1D2 LTR MaLR -6 364 1 5 1298 699 246 0 50 chr17 93546563 93546743 -1725908 - B3A SINE B2 0 198 28 5 1298 1292 91 17 0 chr17 93546799 93546974 -1725677 - B2_Mm2 SINE B2 -14 181 4 5 1298 561 344 94 13 chr17 93547061 93547285 -1725366 + B4A SINE B4 49 290 -2 5 1298 222 191 0 0 chr17 93547304 93547351 -1725300 + (CATA)n Simple_repeat Simple_repeat 4 50 0 5 1298 355 273 78 0 chr17 93547497 93547574 -1725077 - B1F1 SINE Alu -65 84 2 5 1298 2846 36 2 143 chr17 93548046 93548500 -1724151 - RLTR10 LTR ERVK 0 390 1 6 1298 8473 13 0 1 chr17 93548500 93549498 -1723153 - RLTR10-int LTR ERVK -1 1986 990 6 1298 299 273 39 15 chr17 93549580 93549710 -1722941 - RLTR10-int LTR ERVK -5987 1594 1462 6 1298 3621 42 28 2 chr17 93549774 93550633 -1722018 - RLTR10-int LTR ERVK -989 998 41 6 1298 2826 39 2 143 chr17 93550643 93551097 -1721554 - RLTR10 LTR ERVK 0 390 1 6 1298 912 196 116 28 chr17 93551145 93551308 -1721343 + ORR1C1 LTR MaLR 1 163 -215 6 1298 518 0 16 0 chr17 93551308 93551370 -1721281 + (TC)n Simple_repeat Simple_repeat 2 64 0 6 1298 912 238 101 42 chr17 93551370 93551453 -1721198 + ORR1C1 LTR MaLR 156 233 -145 6 1298 761 232 97 56 chr17 93551440 93551760 -1720891 - RLTR15 LTR ERVK -26 333 1 6 1298 4900 186 47 48 chr17 93551760 93552944 -1719707 - MYSERV6-int LTR ERVK -1 8958 7777 6 1298 523 264 44 63 chr17 93552944 93553156 -1719495 - RMER4A LTR ERVK -20 565 255 6 1298 801 281 32 18 chr17 93553158 93553441 -1719210 - MYSERV-int LTR ERVK -1418 5132 4846 6 1298 439 247 63 29 chr17 93553496 93553671 -1718980 - RLTR15 LTR ERVK -177 182 2 6 1298 473 82 364 10 chr17 93553947 93554046 -1718605 - B2_Mm2 SINE B2 -15 180 47 6 1298 1151 103 23 17 chr17 93554062 93554216 -1718435 - B2_Mm1t SINE B2 -14 179 23 6 1298 248 0 0 30 chr17 93554216 93554249 -1718402 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 7 1298 1074 95 0 0 chr17 93554249 93554386 -1718265 - B1_Mus2 SINE Alu -10 137 1 7 1298 1151 103 23 17 chr17 93554386 93554407 -1718244 - B2_Mm1t SINE B2 -171 22 3 6 1298 25 0 0 0 chr17 93554932 93554957 -1717694 + AT_rich Low_complexity Low_complexity 1 25 0 7 1298 347 260 51 25 chr17 93555028 93555107 -1717544 - B4A SINE B4 0 292 212 7 1298 1149 75 0 0 chr17 93555119 93555266 -1717385 + B1_Mus2 SINE Alu 1 147 0 7 1298 696 175 35 35 chr17 93555275 93555414 -1717237 - B2_Mm2 SINE B2 -14 181 43 7 1298 3960 140 55 56 chr17 93555414 93556484 -1716167 - RLTR13D1 LTR ERVK 0 1023 1 7 1298 224 152 0 164 chr17 93556486 93556541 -1716110 - B2_Mm2 SINE B2 -149 46 1 7 1298 288 0 0 0 chr17 93556546 93556578 -1716073 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 7 1298 440 283 20 0 chr17 93556578 93556677 -1715974 - B4A SINE B4 -77 215 115 7 1298 3053 54 193 2 chr17 93556747 93557177 -1715474 - RLTR1B LTR ERV1 0 512 1 7 1298 347 240 13 0 chr17 93557314 93557389 -1715262 - ID4 SINE ID -6 77 2 7 1298 447 68 0 0 chr17 93557681 93557740 -1714911 + (T)n Simple_repeat Simple_repeat 1 59 0 8 1298 224 195 0 0 chr17 93557748 93557789 -1714862 + (GGGTG)n Simple_repeat Simple_repeat 1 41 0 8 1298 381 200 200 0 chr17 93558548 93558648 -1714003 + PB1D9 SINE Alu 1 120 0 8 1298 306 0 0 0 chr17 93558914 93558948 -1713703 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 1298 255 209 15 0 chr17 93558952 93559019 -1713632 + L1MA9 LINE L1 5874 5941 -371 8 1298 4242 136 37 32 chr17 93559266 93560018 -1712633 - RMER6A LTR ERVK 0 756 1 8 1298 237 315 0 40 chr17 93560124 93560200 -1712451 + PB1D10 SINE Alu 34 106 -11 8 1298 243 0 0 0 chr17 93560200 93560227 -1712424 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 1298 831 86 0 0 chr17 93560229 93560346 -1712305 + (GAAA)n Simple_repeat Simple_repeat 2 118 0 8 1298 898 175 0 0 chr17 93560727 93560870 -1711781 - B1_Mur1 SINE Alu -6 143 1 8 1298 478 218 79 101 chr17 93560925 93560942 -1711709 - B2_Mm2 SINE B2 -9 186 170 9 1298 1588 90 4 0 chr17 93560942 93561176 -1711475 - Lx3_Mus LINE L1 0 7009 6775 9 1298 661 214 79 42 chr17 93561176 93561347 -1711304 - B3 SINE B2 -26 169 2 9 1298 381 22 0 0 chr17 93561438 93561484 -1711167 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 9 1298 257 235 0 0 chr17 93562186 93562237 -1710414 + RMER30 DNA MER1_type 1 51 -151 9 1298 361 301 48 27 chr17 93562472 93562619 -1710032 - MER74A LTR ERVL -262 296 147 9 1298 431 355 41 83 chr17 93563273 93563491 -1709160 + MER21B LTR ERV1 100 308 -555 9 1298 1744 64 159 0 chr17 93564082 93564346 -1708305 - L1_Mus1 LINE L1 -428 6139 5834 9 1298 3351 54 0 0 chr17 93564346 93564753 -1707898 + L1_Mus1 LINE L1 6161 6567 0 9 1298 232 370 8 16 chr17 93564754 93564875 -1707776 + MamGypLTR2b LTR Gypsy 789 908 -14 9 1298 1987 148 16 0 chr17 93565397 93565701 -1706950 - RLTR27 LTR ERVK 0 309 1 9 1298 325 206 14 14 chr17 93566155 93566224 -1706427 + ID4_ SINE ID 3 71 -12 9 1298 470 301 0 16 chr17 93566263 93566388 -1706263 + MLT2C2 LTR ERVL 6 128 -336 1 1298 3755 186 52 40 chr17 93566394 93567226 -1705425 - Lx5 LINE L1 -3 7047 6206 1 1298 306 0 0 0 chr17 93567503 93567537 -1705114 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 1 1298 999 56 160 0 chr17 93567547 93567691 -1704960 - B2_Mm1t SINE B2 -25 168 2 1 1298 299 246 82 0 chr17 93567768 93567829 -1704822 - ID4_ SINE ID 0 83 18 1 1298 531 333 54 40 chr17 93568352 93568702 -1703949 + Lx8 LINE L1 7114 7468 -5 1 1298 1113 255 107 71 chr17 93568837 93569259 -1703392 + RLTR28B LTR ERVL 3 439 -42 1 1298 733 333 90 15 chr17 93569276 93569675 -1702976 + Lx8 LINE L1 6895 7323 -150 1 1298 3156 42 2 14 chr17 93569738 93569786 -1702865 + L1Md_F2 LINE L1 5178 5225 -658 1 1298 2761 61 3 0 chr17 93569786 93570131 -1702520 - ORR1A0 LTR MaLR 0 346 1 1 1298 3156 42 2 14 chr17 93570131 93570496 -1702155 + L1Md_F2 LINE L1 5226 5586 -297 1 1298 7252 68 39 4 chr17 93570497 93571458 -1701193 + L1Md_F2 LINE L1 5588 6581 -1 1 1298 323 154 15 0 chr17 93571554 93571619 -1701032 + (CATA)n Simple_repeat Simple_repeat 3 68 0 1 1298 827 258 74 0 chr17 93571691 93571881 -1700770 - B3 SINE B2 -2 214 11 1 1298 675 0 0 0 chr17 93571972 93572047 -1700604 + (GAA)n Simple_repeat Simple_repeat 2 76 0 1 1298 1398 46 0 0 chr17 93572047 93572221 -1700430 + (GAAA)n Simple_repeat Simple_repeat 3 176 0 1 1298 445 340 53 50 chr17 93572352 93572693 -1699958 + HAL1 LINE L1 993 1334 -1173 1 1298 379 320 107 48 chr17 93572772 93572959 -1699692 + B3A SINE B2 1 198 0 1 1298 1549 263 58 58 chr17 93573510 93574347 -1698304 + L1_Rod LINE L1 3798 4634 -1213 1 1298 6878 83 13 45 chr17 93574433 93574794 -1697857 - L1VL2 LINE L1 -1586 2029 1720 1 1298 3732 105 4 4 chr17 93574794 93575338 -1697313 - L1_Mus3 LINE L1 -6 6632 6089 1 1298 6878 90 14 34 chr17 93575338 93576882 -1695769 - L1VL2 LINE L1 -1896 1719 171 1 1298 1010 293 42 12 chr17 93576886 93577221 -1695430 - Lx6 LINE L1 -11 7449 7105 1 1298 1000 202 238 33 chr17 93577716 93578023 -1694628 + ORR1D2 LTR MaLR 1 370 0 1 1298 504 306 59 5 chr17 93578068 93578255 -1694396 + Lx8 LINE L1 7131 7327 -146 1 1298 183 129 0 0 chr17 93578262 93578293 -1694358 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1298 192 77 0 0 chr17 93578342 93578368 -1694283 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1298 405 39 0 0 chr17 93578372 93578423 -1694228 + (GA)n Simple_repeat Simple_repeat 1 51 0 1 1298 278 322 96 0 chr17 93578537 93578683 -1693968 + MER117 DNA MER1_type 6 165 -32 1 1298 291 294 12 0 chr17 93578726 93578811 -1693840 + L2a LINE L2 3263 3348 -78 1 1298 369 0 0 0 chr17 93578825 93578866 -1693785 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1298 715 273 33 0 chr17 93578868 93579018 -1693633 - B3A SINE B2 -42 156 2 1 1298 30 0 0 0 chr17 93579079 93579109 -1693542 + AT_rich Low_complexity Low_complexity 1 30 0 1 1298 207 69 0 0 chr17 93579140 93579169 -1693482 + (CCA)n Simple_repeat Simple_repeat 1 29 0 1 1298 558 305 8 0 chr17 93579169 93579300 -1693351 - RSINE1 SINE B4 -31 134 3 1 1298 284 304 122 18 chr17 93579909 93580073 -1692578 + MER33 DNA MER1_type 1 181 -143 1 1298 1227 34 7 0 chr17 93580269 93580415 -1692236 + B1_Mus1 SINE Alu 2 148 0 1 1298 240 59 0 0 chr17 93580418 93580452 -1692199 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1298 1113 280 107 28 chr17 93580634 93581119 -1691532 + L1M2 LINE L1 4400 4954 -1189 1 1298 309 89 0 0 chr17 93581119 93581164 -1691487 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 1298 1113 278 102 25 chr17 93581164 93581437 -1691214 + L1M2 LINE L1 4955 5246 -897 1 1298 330 87 0 0 chr17 93581507 93581553 -1691098 + (GAAA)n Simple_repeat Simple_repeat 4 49 0 1 1298 339 25 0 0 chr17 93581560 93581600 -1691051 + (GGGAA)n Simple_repeat Simple_repeat 2 41 0 1 1298 777 273 32 5 chr17 93581696 93581884 -1690767 - B3A SINE B2 -4 194 2 1 1298 319 298 48 52 chr17 93582086 93582306 -1690345 - L1MC4 LINE L1 -1157 6885 6607 1 1298 673 270 0 0 chr17 93582438 93582586 -1690065 + B1_Mus1 SINE Alu 1 148 0 1 1298 672 188 41 55 chr17 93582972 93583118 -1689533 - B1_Mus1 SINE Alu -3 145 2 1 1298 249 281 0 176 chr17 93583027 93583135 -1689516 - MT2B LTR ERVL -361 240 152 1 1298 227 103 0 25 chr17 93583754 93583794 -1688857 + (TTCCC)n Simple_repeat Simple_repeat 1 39 0 1 1298 380 252 131 41 chr17 93583794 93583939 -1688712 - HAL1-3A_ME LINE L1 -420 2438 2281 1 1298 505 265 3 4 chr17 93583941 93584059 -1688592 - B1_Mus1 SINE Alu -21 127 12 1 1298 600 206 47 0 chr17 93584189 93584296 -1688355 + B3 SINE B2 2 113 -103 1 1298 250 186 0 0 chr17 93584347 93584390 -1688261 + B4A SINE B4 204 246 -46 1 1298 771 298 21 10 chr17 93584400 93584593 -1688058 - B4A SINE B4 -89 203 9 1 1298 712 266 55 84 chr17 93584585 93584823 -1687828 - MLT1B LTR MaLR -159 231 1 1 1299 216 278 0 0 chr17 93586086 93586140 -1686511 + ID4_ SINE ID 29 82 -1 1 1299 5760 64 0 0 chr17 93586143 93586908 -1685743 + L1Md_F2 LINE L1 4822 5586 -297 1 1299 7845 42 25 3 chr17 93586909 93587871 -1684780 + L1Md_F2 LINE L1 5588 6570 -12 1 1299 549 90 0 0 chr17 93587980 93588058 -1684593 - RLTR13D3 LTR ERVK -108 1006 929 1 1299 384 248 59 17 chr17 93588379 93588498 -1684153 - PB1 SINE Alu -3 124 1 1 1299 1160 68 0 20 chr17 93588577 93588716 -1683935 + B1_Mus1 SINE Alu 1 139 -9 1 1299 226 0 29 29 chr17 93588716 93588751 -1683900 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1299 1160 68 0 20 chr17 93588751 93588762 -1683889 + B1_Mus1 SINE Alu 140 148 0 1 1299 448 273 0 83 chr17 93588929 93589037 -1683614 - RSINE1 SINE B4 0 165 67 1 1299 2413 233 112 75 chr17 93589041 93589961 -1682690 + RMER17B LTR ERVK 5 958 0 1 1299 239 0 0 31 chr17 93590416 93590448 -1682203 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 1 1299 604 274 98 22 chr17 93590523 93590652 -1681999 + B3A SINE B2 2 147 -51 1 1299 396 40 0 0 chr17 93590652 93590702 -1681949 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1299 918 107 0 0 chr17 93590702 93590860 -1681791 + (GA)n Simple_repeat Simple_repeat 2 160 0 1 1299 604 274 98 22 chr17 93590860 93590912 -1681739 + B3A SINE B2 148 197 -1 1 1299 452 261 57 57 chr17 93590942 93591064 -1681587 + ID_B1 SINE B4 90 211 -13 1 1299 477 204 47 28 chr17 93591077 93591183 -1681468 + B1_Mur1 SINE Alu 41 148 -1 1 1299 632 259 0 26 chr17 93591301 93591452 -1681199 + B1_Mur1 SINE Alu 3 149 0 1 1299 182 357 168 21 chr17 93592579 93592722 -1679929 + MIRb SINE MIR 99 262 -6 1 1299 548 161 186 0 chr17 93593065 93593183 -1679468 - B1_Mus2 SINE Alu -1 146 7 1 1299 288 0 0 0 chr17 93593680 93593712 -1678939 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1299 906 76 0 0 chr17 93596114 93596246 -1676405 + (TTTC)n Simple_repeat Simple_repeat 1 132 0 1 1299 504 0 0 0 chr17 93596959 93597015 -1675636 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 1299 243 0 0 0 chr17 93597030 93597057 -1675594 + (GA)n Simple_repeat Simple_repeat 1 27 0 1 1299 477 0 0 0 chr17 93598986 93599039 -1673612 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1299 222 37 0 0 chr17 93599773 93599800 -1672851 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1 1299 25 65 0 0 chr17 93603658 93603704 -1668947 + AT_rich Low_complexity Low_complexity 1 46 0 1 1299 255 167 0 0 chr17 93605106 93605172 -1667479 + A-rich Low_complexity Low_complexity 1 66 0 1 1299 604 122 220 8 chr17 93606639 93606771 -1665880 + RLTR15 LTR ERVK 181 340 -19 1 1299 25 51 0 0 chr17 93607496 93607535 -1665116 + AT_rich Low_complexity Low_complexity 1 39 0 1 1299 1499 196 103 7 chr17 93608156 93608562 -1664089 - RCHARR1 DNA MER1_type -9 965 521 1 1299 834 199 24 6 chr17 93608548 93608731 -1663920 - B3 SINE B2 0 195 1 1 1299 1413 218 193 5 chr17 93608746 93609156 -1663495 - RCHARR1 DNA MER1_type -457 517 31 1 1299 1776 125 26 91 chr17 93609298 93609649 -1663002 + ORR1A4 LTR MaLR 1 328 -1 1 1299 564 15 0 0 chr17 93609849 93609914 -1662737 + (TTTC)n Simple_repeat Simple_repeat 2 66 0 1 1299 363 242 0 0 chr17 93609915 93610014 -1662637 + T-rich Low_complexity Low_complexity 23 121 0 1 1299 1181 74 0 0 chr17 93610023 93610171 -1662480 - B1_Mus1 SINE Alu 0 148 1 1 1299 498 17 0 0 chr17 93610892 93610951 -1661700 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1299 766 216 133 23 chr17 93612077 93612370 -1660281 - L1MB1 LINE L1 -74 6094 5783 1 1299 569 185 88 82 chr17 93612370 93612517 -1660134 - B1_Mur4 SINE Alu -2 148 1 1 1299 709 235 111 73 chr17 93612517 93612612 -1660039 - L1MB1 LINE L1 -407 5782 5694 1 1299 318 26 0 0 chr17 93612837 93612876 -1659775 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1299 231 61 0 0 chr17 93613326 93613359 -1659292 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 1 1299 21 0 0 0 chr17 93614356 93614377 -1658274 + AT_rich Low_complexity Low_complexity 1 21 0 1 1299 7216 26 1 1 chr17 93614638 93615477 -1657174 - L1Md_T LINE L1 -1 6581 5743 1 1299 609 217 180 9 chr17 93615520 93615816 -1656835 + MTD LTR MaLR 1 419 0 1 1299 269 141 39 39 chr17 93616844 93616947 -1655704 + (CAGA)n Simple_repeat Simple_repeat 4 106 0 1 1299 348 307 65 14 chr17 93617949 93618088 -1654563 + MER5A DNA MER1_type 13 158 -31 1 1299 437 267 47 56 chr17 93619076 93619290 -1653361 - RLTR15 LTR ERVK -33 326 115 1 1299 404 250 91 127 chr17 93619297 93619322 -1653329 - B2_Mm2 SINE B2 -4 191 170 1 1299 399 21 0 0 chr17 93619322 93619370 -1653281 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1299 634 250 91 127 chr17 93619370 93619541 -1653110 - B3A SINE B2 -26 169 2 1 1299 22 35 0 0 chr17 93619550 93619579 -1653072 + AT_rich Low_complexity Low_complexity 1 29 0 1 1299 5688 90 86 2 chr17 93620003 93620935 -1651716 + L1_Mus3 LINE L1 5684 6638 0 1 1299 270 284 44 15 chr17 93620977 93621045 -1651606 - ORR1D1 LTR MaLR -304 70 1 1 1299 737 192 65 18 chr17 93621257 93621427 -1651224 - ORR1D1 LTR MaLR -43 331 154 2 1299 396 103 0 0 chr17 93621428 93621486 -1651165 + (GGGA)n Simple_repeat Simple_repeat 4 61 0 2 1299 723 258 16 33 chr17 93621487 93621671 -1650980 - ORR1D1 LTR MaLR -193 181 1 2 1299 246 260 65 0 chr17 93621823 93621946 -1650705 + L1ME3A LINE L1 6033 6163 -10 2 1299 288 304 17 0 chr17 93622239 93622354 -1650297 + (TA)n Simple_repeat Simple_repeat 2 118 0 2 1299 1659 31 0 0 chr17 93622581 93622773 -1649878 + B2_Mm1a SINE B2 2 193 0 2 1299 1266 97 48 0 chr17 93623114 93623300 -1649351 - B2_Mm2 SINE B2 0 195 1 2 1299 277 32 30 61 chr17 93623588 93623654 -1648997 + (TTTTG)n Simple_repeat Simple_repeat 5 68 0 2 1299 274 306 40 20 chr17 93624550 93624650 -1648001 + MIRb SINE MIR 100 201 -67 2 1299 230 216 0 218 chr17 93624792 93624916 -1647735 + MLT1A1 LTR MaLR 1 97 -311 2 1299 304 284 64 50 chr17 93625082 93625223 -1647428 + MLT1A1 LTR MaLR 247 389 -19 2 1299 350 0 44 0 chr17 93625967 93626012 -1646639 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 2 1299 42 20 0 0 chr17 93626055 93626104 -1646547 + AT_rich Low_complexity Low_complexity 1 49 0 2 1299 606 266 37 25 chr17 93626123 93626285 -1646366 - RSINE1 SINE B4 0 165 2 2 1299 387 0 0 0 chr17 93626687 93626730 -1645921 + (TC)n Simple_repeat Simple_repeat 1 43 0 2 1299 260 164 0 32 chr17 93626732 93626795 -1645856 + CT-rich Low_complexity Low_complexity 3 63 0 2 1299 281 47 23 0 chr17 93626834 93626877 -1645774 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2 1299 601 261 173 27 chr17 93626881 93627066 -1645585 - B4A SINE B4 -77 215 4 2 1299 261 286 0 0 chr17 93627080 93627143 -1645508 - MER115 DNA Tip100 -135 558 496 2 1299 2528 166 6 49 chr17 93627190 93627677 -1644974 - RMER4A LTR ERVK 0 466 1 2 1299 189 0 0 0 chr17 93627964 93627985 -1644666 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1299 926 248 99 82 chr17 93628832 93629175 -1643476 + ORR1E LTR MaLR 10 358 -1 2 1299 414 0 0 0 chr17 93629666 93629712 -1642939 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 1299 428 342 0 0 chr17 93630050 93630275 -1642376 + (TG)n Simple_repeat Simple_repeat 1 225 0 2 1299 611 270 47 84 chr17 93630277 93630576 -1642075 - B4 SINE B4 -4 288 1 2 1299 189 195 0 0 chr17 93630919 93630960 -1641691 + T-rich Low_complexity Low_complexity 1 41 0 2 1299 329 297 93 8 chr17 93631507 93631636 -1641015 + MIR SINE MIR 17 156 -106 2 1299 256 200 0 0 chr17 93631670 93631730 -1640921 + Lx6 LINE L1 7375 7434 -26 2 1299 246 32 0 0 chr17 93631737 93631768 -1640883 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1299 389 363 7 0 chr17 93631768 93631903 -1640748 - ID_B1 SINE B4 -10 214 79 2 1299 185 257 68 54 chr17 93632120 93632194 -1640457 + L3 LINE CR1 4145 4219 -270 2 1299 1320 211 138 38 chr17 93632196 93632594 -1640057 - RMER10A LTR ERVL -4 438 1 2 1299 510 214 164 47 chr17 93633261 93633536 -1639115 + Charlie1a DNA MER1_type 1076 1382 -73 2 1299 390 42 0 0 chr17 93633616 93633664 -1638987 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1299 232 137 39 0 chr17 93634645 93634696 -1637955 + (TTA)n Simple_repeat Simple_repeat 3 55 0 2 1299 541 174 12 0 chr17 93634723 93634826 -1637825 - B3 SINE B2 -88 110 2 2 1299 232 351 0 78 chr17 93634832 93634934 -1637717 + MIRb SINE MIR 34 127 -141 2 1299 347 303 38 19 chr17 93635246 93635404 -1637247 - Lx8 LINE L1 -334 7139 6979 2 1299 324 70 0 0 chr17 93635762 93635805 -1636846 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1299 238 354 93 22 chr17 93635805 93635987 -1636664 + ORR1E LTR MaLR 1 195 -164 2 1299 754 161 84 8 chr17 93636127 93636258 -1636393 - B1_Mur4 SINE Alu -1 149 9 2 1299 483 267 42 49 chr17 93636132 93636274 -1636377 - B4 SINE B4 -72 220 80 2 1299 829 250 77 0 chr17 93637125 93637321 -1635330 - B3 SINE B2 -5 211 1 2 1299 289 370 60 23 chr17 93637395 93637611 -1635040 - MIRb SINE MIR -8 260 37 2 1299 3870 110 65 0 chr17 93638326 93638944 -1633707 + L1Md_F LINE L1 448 1105 -5511 2 1299 15468 83 5 2 chr17 93638938 93639107 -1633544 + L1Md_F LINE L1 2158 2326 -3557 2 1299 3573 50 5 0 chr17 93639107 93639548 -1633103 + L1Md_F3 LINE L1 6129 6571 -13 2 1299 6107 45 0 5 chr17 93639546 93640297 -1632354 + L1Md_F2 LINE L1 5834 6580 -2 2 1299 15468 83 5 2 chr17 93640297 93642378 -1630273 + L1Md_F LINE L1 2327 4416 -1467 2 1299 1102 81 62 0 chr17 93642378 93642539 -1630112 + L1Md_F2 LINE L1 6400 6570 -12 2 1299 304 342 58 26 chr17 93642913 93643069 -1629582 + RSINE1 SINE B4 5 165 0 2 1299 180 111 0 0 chr17 93643080 93643107 -1629544 + (CATA)n Simple_repeat Simple_repeat 2 28 0 2 1299 3587 108 6 5 chr17 93643766 93644431 -1628220 + L1_Mus4 LINE L1 5253 5918 -718 2 1299 715 190 48 21 chr17 93644842 93644987 -1627664 + B1_Mur4 SINE Alu 2 150 0 2 1299 316 226 0 0 chr17 93645085 93645147 -1627504 + B3A SINE B2 3 64 -134 2 1299 2525 192 68 13 chr17 93645473 93645659 -1626992 - L1_Mur3 LINE L1 -3950 1930 1748 2 1299 3213 41 25 8 chr17 93645659 93646047 -1626604 - L1Md_F2 LINE L1 -12 6570 6173 2 1299 913 37 0 0 chr17 93646047 93646154 -1626497 - U6 snRNA snRNA 0 107 1 2 1299 2525 200 70 54 chr17 93646162 93647004 -1625647 - L1_Mur3 LINE L1 -4133 1747 886 2 1299 555 114 8 34 chr17 93647668 93647786 -1624865 + GA-rich Low_complexity Low_complexity 3 117 0 2 1299 1008 25 0 0 chr17 93648696 93648815 -1623836 + (TTC)n Simple_repeat Simple_repeat 2 120 0 2 1299 5861 152 20 13 chr17 93648815 93650216 -1622435 - Lx LINE L1 -36 6618 5192 2 1299 954 145 7 0 chr17 93651494 93651639 -1621012 - B1_Mus1 SINE Alu -1 147 2 2 1299 204 40 0 0 chr17 93651754 93651779 -1620872 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 2 1299 1133 206 48 60 chr17 93652362 93652698 -1619953 - RMER17C LTR ERVK 0 410 79 2 1299 330 304 72 14 chr17 93653991 93654214 -1618437 - L1MA9 LINE L1 -81 6231 5996 2 1299 271 290 65 9 chr17 93654304 93654412 -1618239 + RSINE1 SINE B4 44 157 -8 2 1299 614 252 31 16 chr17 93654494 93654623 -1618028 - RSINE1 SINE B4 -33 132 2 2 1299 469 319 52 0 chr17 93654656 93654791 -1617860 - ID_B1 SINE B4 -5 219 78 2 1299 237 302 19 9 chr17 93654791 93654898 -1617753 - L1MA9 LINE L1 -708 5604 5497 2 1299 216 67 0 0 chr17 93655356 93655386 -1617265 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 1299 320 111 0 18 chr17 93655393 93655448 -1617203 + (GA)n Simple_repeat Simple_repeat 2 55 0 2 1299 405 0 0 0 chr17 93655532 93655577 -1617074 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 1299 583 316 16 21 chr17 93655599 93655754 -1616897 - B3A SINE B2 -35 163 5 2 1299 483 233 155 18 chr17 93655777 93655996 -1616655 - Lx9 LINE L1 -1 7643 7395 2 1299 2030 274 85 113 chr17 93656412 93657747 -1614904 - RMER12 LTR ERVK -25 1297 1 2 1299 257 316 26 13 chr17 93657750 93657827 -1614824 + L2b LINE L2 3248 3325 -50 2 1299 4126 66 0 17 chr17 93657886 93658426 -1614225 + L1_Mus2 LINE L1 6035 6565 -1 2 1299 270 319 65 11 chr17 93658608 93658700 -1613951 - B4A SINE B4 -194 98 2 2 1299 2294 179 32 12 chr17 93658812 93659219 -1613432 + MTC LTR MaLR 1 415 -6 2 1299 632 13 13 0 chr17 93660726 93660803 -1611848 + (TC)n Simple_repeat Simple_repeat 1 78 0 2 1299 279 269 0 0 chr17 93661235 93661302 -1611349 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 1299 633 248 164 23 chr17 93661303 93661559 -1611092 - B4A SINE B4 0 292 1 2 1299 418 271 77 8 chr17 93661651 93661781 -1610870 - B1F SINE Alu -10 139 1 2 1299 270 0 0 0 chr17 93661795 93661825 -1610826 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2 1299 489 319 8 8 chr17 93661825 93661945 -1610706 - ID_B1 SINE B4 -12 212 93 2 1299 359 270 23 0 chr17 93661982 93662097 -1610554 - B1F2 SINE Alu -21 128 10 2 1299 525 16 0 0 chr17 93662838 93662900 -1609751 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 1299 289 250 43 29 chr17 93662903 93662973 -1609678 - B3 SINE B2 -66 150 80 2 1299 355 389 7 7 chr17 93663030 93663175 -1609476 - MIRb SINE MIR -105 163 19 2 1299 222 349 35 0 chr17 93663187 93663273 -1609378 + L2a LINE L2 3324 3412 -14 2 1299 1817 172 18 15 chr17 93664118 93664449 -1608202 - ORR1A1 LTR MaLR 0 346 15 2 1299 830 327 116 23 chr17 93664575 93664972 -1607679 - MLT1C LTR MaLR 0 467 34 2 1299 180 0 0 0 chr17 93664986 93665006 -1607645 + (TG)n Simple_repeat Simple_repeat 1 20 0 2 1299 708 282 52 0 chr17 93665027 93665201 -1607450 - B3A SINE B2 -15 183 1 2 1299 392 243 14 145 chr17 93665221 93665428 -1607223 - L1MB5 LINE L1 -316 5858 5679 2 1299 1996 159 99 11 chr17 93666420 93666794 -1605857 + MTB_Mm LTR MaLR 1 407 0 2 1299 1178 234 63 70 chr17 93667542 93667825 -1604826 + MTEa LTR MaLR 6 290 -89 2 1299 3428 131 27 14 chr17 93667825 93668385 -1604266 - RMER2 LTR ERV1 0 567 1 2 1299 1178 234 63 70 chr17 93668385 93668432 -1604219 + MTEa LTR MaLR 291 334 -45 2 1299 1184 55 0 0 chr17 93668437 93668583 -1604068 + B1_Mm SINE Alu 1 146 -1 2 1299 207 0 0 0 chr17 93668782 93668805 -1603846 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2 1299 912 116 38 15 chr17 93669262 93669603 -1603048 + (TCTA)n Simple_repeat Simple_repeat 1 348 0 2 1299 2727 174 2 28 chr17 93669811 93670353 -1602298 - Lx LINE L1 0 6654 6127 2 1299 17066 157 40 22 chr17 93670354 93673261 -1599390 - L1VL4 LINE L1 -1254 4632 1675 2 1299 192 40 0 0 chr17 93673261 93673286 -1599365 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 1299 17066 139 24 14 chr17 93673286 93674780 -1597871 - L1VL4 LINE L1 -4212 1674 357 2 1299 354 339 82 31 chr17 93675212 93675407 -1597244 + MT2A LTR ERVL 323 527 -6 2 1299 1006 264 36 80 chr17 93676842 93676977 -1595674 - B4 SINE B4 -28 264 137 3 1299 2363 220 47 67 chr17 93676977 93677600 -1595051 + RMER19C LTR ERVK 2 611 0 3 1299 1006 264 36 80 chr17 93677600 93677740 -1594911 - B4 SINE B4 -156 136 1 3 1299 688 259 86 58 chr17 93677973 93678345 -1594306 + MTEb LTR MaLR 6 379 0 3 1299 4322 62 14 3 chr17 93678595 93679161 -1593490 + L1Md_F2 LINE L1 6011 6582 0 3 1299 25 51 0 0 chr17 93680221 93680260 -1592391 + AT_rich Low_complexity Low_complexity 1 39 0 3 1299 6477 123 20 3 chr17 93680617 93682136 -1590515 - L1_Mus4 LINE L1 -90 6546 5003 3 1299 378 0 0 0 chr17 93682136 93682178 -1590473 + (T)n Simple_repeat Simple_repeat 1 42 0 3 1299 37934 30 1 0 chr17 93682215 93689060 -1583591 - L1Md_T LINE L1 0 6585 1 3 1299 15993 155 25 6 chr17 93689060 93691959 -1580692 - L1_Mus4 LINE L1 -868 5015 2063 3 1299 215 61 0 29 chr17 93692504 93692538 -1580113 + (GAAA)n Simple_repeat Simple_repeat 4 36 0 3 1299 189 121 0 0 chr17 93693182 93693215 -1579436 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 3 1299 441 0 0 0 chr17 93693216 93693265 -1579386 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1299 414 202 173 0 chr17 93693291 93693395 -1579256 - RSINE1 SINE B4 -41 124 3 3 1299 513 301 110 6 chr17 93693395 93693559 -1579092 + MER2 DNA MER2_type 164 344 -1 3 1299 263 326 87 93 chr17 93693672 93693973 -1578678 + MamGypLTR1d LTR Gypsy 369 799 -14 3 1299 634 305 108 12 chr17 93695374 93695633 -1577018 + B4A SINE B4 2 285 -7 3 1299 21 57 0 0 chr17 93695753 93695788 -1576863 + AT_rich Low_complexity Low_complexity 1 35 0 3 1299 274 282 0 0 chr17 93695789 93695867 -1576784 + L1Md_F LINE L1 615 692 -5827 3 1299 212 180 78 136 chr17 93695977 93696080 -1576571 + B1_Mur4 SINE Alu 22 118 -32 3 1299 236 224 50 50 chr17 93696119 93696199 -1576452 + L1_Mus2 LINE L1 655 734 -5882 3 1299 734 100 46 8 chr17 93696188 93696319 -1576332 + L1_Mus2 LINE L1 2032 2167 -3716 3 1299 15342 122 16 16 chr17 93696346 93699580 -1573071 + L1_Mus2 LINE L1 3351 6566 0 3 1299 30158 105 17 2 chr17 93699904 93703309 -1569342 - L1Md_F2 LINE L1 -14 6568 3145 3 1299 360 0 0 0 chr17 93703309 93703349 -1569302 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 3 1299 30158 147 20 9 chr17 93703349 93705977 -1566674 - L1Md_F2 LINE L1 -2739 3144 492 3 1299 5640 176 55 13 chr17 93705996 93706334 -1566317 - L1_Mur3 LINE L1 -896 4984 4626 3 1299 461 115 13 0 chr17 93706334 93706412 -1566239 + (TG)n Simple_repeat Simple_repeat 2 80 0 3 1299 5640 176 55 13 chr17 93706412 93707238 -1565413 - L1_Mur3 LINE L1 -1255 4625 3772 3 1299 1127 179 5 0 chr17 93707228 93707424 -1565227 - L1_Mur3 LINE L1 -7229 499 303 3 1299 1017 164 114 5 chr17 93707626 93707828 -1564823 + URR1A DNA MER1_type 1 224 -2 3 1299 209 266 0 96 chr17 93708959 93709063 -1563588 + (TCTCTG)n Simple_repeat Simple_repeat 3 96 0 3 1299 28 29 0 0 chr17 93709823 93709858 -1562793 + AT_rich Low_complexity Low_complexity 1 35 0 3 1299 225 0 0 0 chr17 93709967 93709992 -1562659 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 3 1299 598 294 61 22 chr17 93710321 93710502 -1562149 - B3A SINE B2 -9 189 2 3 1299 361 192 68 0 chr17 93710667 93710740 -1561911 + L1MA4 LINE L1 5851 5928 -372 3 1299 504 0 0 0 chr17 93711110 93711166 -1561485 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 1299 279 0 0 0 chr17 93712206 93712237 -1560414 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1299 216 216 0 0 chr17 93713861 93713912 -1558739 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 1299 331 275 170 27 chr17 93714606 93714718 -1557933 + ID_B1 SINE B4 87 214 -10 3 1299 310 347 0 0 chr17 93715140 93715212 -1557439 + ID2 SINE ID 2 73 -10 3 1299 253 390 86 0 chr17 93715212 93715245 -1557406 + ID_B1 SINE B4 2 115 -109 3 1299 1379 98 30 0 chr17 93715837 93716040 -1556611 + L1_Mur2 LINE L1 4496 4704 -1173 3 1300 1409 60 0 0 chr17 93716784 93716966 -1555685 - L1_Mus1 LINE L1 0 6567 6386 3 1300 188 34 0 33 chr17 93717041 93717071 -1555580 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3 1300 358 319 79 50 chr17 93717146 93717423 -1555228 + L1M5 LINE L1 3381 3665 -2481 3 1300 584 332 52 43 chr17 93717423 93717634 -1555017 + B3A SINE B2 2 214 -2 3 1300 186 43 0 0 chr17 93717683 93717706 -1554945 + (TA)n Simple_repeat Simple_repeat 1 23 0 3 1300 707 361 22 19 chr17 93717812 93718080 -1554571 + MER76 LTR ERVL 1 269 -422 3 1300 320 186 0 0 chr17 93718085 93718144 -1554507 + RMER3D-int LTR ERVK 2 60 -2782 3 1300 360 164 0 0 chr17 93718156 93718223 -1554428 + T-rich Low_complexity Low_complexity 1 67 0 3 1300 1007 236 59 26 chr17 93718285 93718590 -1554061 + RMER3D-int LTR ERVK 163 477 -2365 3 1300 255 184 0 20 chr17 93718715 93718765 -1553886 + RMER3D-int LTR ERVK 1014 1062 -1780 3 1300 395 181 31 69 chr17 93718839 93718999 -1553652 + RMER3D-int LTR ERVK 680 833 -2009 3 1300 5846 199 76 54 chr17 93719039 93720789 -1551862 + RMER3D-int LTR ERVK 1015 2802 -40 3 1300 3602 159 56 11 chr17 93720854 93721516 -1551135 + RLTR17 LTR ERVK 1 692 0 3 1300 1086 324 37 21 chr17 93721516 93721889 -1550762 + MER76 LTR ERVL 312 691 0 3 1300 521 250 240 52 chr17 93722261 93722421 -1550230 - ORR1D2 LTR MaLR 0 370 150 3 1300 801 31 0 0 chr17 93722421 93722517 -1550134 + (GA)n Simple_repeat Simple_repeat 1 96 0 3 1300 521 250 240 52 chr17 93722517 93722664 -1549987 - ORR1D2 LTR MaLR -221 149 6 3 1300 214 152 34 0 chr17 93722924 93722983 -1549668 + (TCTA)n Simple_repeat Simple_repeat 3 63 0 3 1300 186 143 0 0 chr17 93723011 93723046 -1549605 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 3 1300 225 0 0 0 chr17 93723257 93723282 -1549369 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 3 1300 267 31 0 0 chr17 93723291 93723323 -1549328 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3 1300 883 145 103 168 chr17 93723361 93723652 -1548999 + RLTR45-int LTR ERVK 2121 2392 -4852 3 1300 811 206 58 32 chr17 93723656 93723936 -1548715 + RLTR9A LTR ERVK 104 381 -28 3 1300 513 136 46 23 chr17 93723966 93724139 -1548512 + (TCTA)n Simple_repeat Simple_repeat 3 179 0 3 1300 250 366 20 10 chr17 93724431 93724533 -1548118 + RMER15 LTR ERVL 347 449 -126 3 1300 408 55 0 0 chr17 93724699 93724754 -1547897 + (CAAAC)n Simple_repeat Simple_repeat 5 59 0 3 1300 400 248 124 31 chr17 93725621 93725646 -1547005 - B1_Mur2 SINE Alu -7 142 118 3 1300 636 14 0 0 chr17 93725646 93725719 -1546932 + (TG)n Simple_repeat Simple_repeat 2 74 0 3 1300 423 226 136 10 chr17 93725719 93725822 -1546829 - B1_Mur3 SINE Alu -32 117 2 3 1300 667 278 128 25 chr17 93727466 93727544 -1545107 + L1MA6 LINE L1 5899 5994 -306 3 1300 345 24 0 0 chr17 93727544 93727586 -1545065 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1300 667 273 110 25 chr17 93727586 93727865 -1544786 + L1MA6 LINE L1 5995 6299 -1 3 1300 264 157 0 19 chr17 93728667 93728719 -1543932 + MTEb LTR MaLR 327 377 -2 3 1300 1153 232 122 9 chr17 93728836 93729171 -1543480 + ORR1C2 LTR MaLR 1 373 -11 3 1300 189 0 0 0 chr17 93729206 93729227 -1543424 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 3 1300 745 213 6 6 chr17 93729399 93729555 -1543096 + Lx7 LINE L1 6973 7128 -568 3 1300 755 274 38 94 chr17 93729559 93729583 -1543068 - MT2A LTR ERVL -2 599 578 3 1300 817 114 183 160 chr17 93729583 93729802 -1542849 - URR1A DNA MER1_type -2 224 1 3 1300 755 274 38 94 chr17 93729802 93729818 -1542833 - MT2A LTR ERVL -24 577 561 3 1300 517 0 44 0 chr17 93729818 93729886 -1542765 + (TCTA)n Simple_repeat Simple_repeat 3 73 0 3 1300 905 251 95 98 chr17 93729886 93730322 -1542329 - MT2A LTR ERVL -41 560 3 3 1300 814 235 103 31 chr17 93730325 93730549 -1542102 + Lx7 LINE L1 7124 7363 -333 3 1300 25 0 0 0 chr17 93730553 93730578 -1542073 + AT_rich Low_complexity Low_complexity 1 25 0 3 1300 310 145 56 28 chr17 93730643 93730714 -1541937 + Lx7 LINE L1 7616 7688 -8 3 1300 25 31 0 0 chr17 93732439 93732471 -1540180 + AT_rich Low_complexity Low_complexity 1 32 0 3 1300 607 281 119 5 chr17 93732822 93733015 -1539636 + ID_B1 SINE B4 3 217 -7 3 1300 2242 208 206 2 chr17 93733053 93733664 -1538987 - RMER19A LTR ERVK -1 736 1 3 1300 23 33 0 0 chr17 93734750 93734780 -1537871 + AT_rich Low_complexity Low_complexity 1 30 0 3 1300 278 241 138 46 chr17 93735261 93735348 -1537303 + RSINE1 SINE B4 14 108 -57 3 1300 2360 159 71 42 chr17 93735659 93736406 -1536245 + L1_Mur1 LINE L1 802 1583 -4303 3 1300 4045 7 0 0 chr17 93736406 93736858 -1535793 + L1Md_A LINE L1 6131 6582 0 3 1300 2360 157 11 34 chr17 93736858 93736945 -1535706 + L1_Mur1 LINE L1 1584 1667 -4219 3 1300 1056 238 45 69 chr17 93736948 93737282 -1535369 + Lx2B LINE L1 6622 6947 -53 3 1300 1117 121 21 0 chr17 93737281 93737471 -1535180 - Lx2 LINE L1 -846 6151 5958 3 1300 4042 130 65 8 chr17 93737471 93738005 -1534646 + Lx2 LINE L1 6312 6883 -114 3 1300 183 80 0 0 chr17 93738005 93738030 -1534621 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 3 1300 4042 130 65 8 chr17 93738030 93738144 -1534507 + Lx2 LINE L1 6884 6997 0 3 1300 1352 263 16 3 chr17 93738144 93738453 -1534198 - MTE2b LTR MaLR -66 313 1 3 1300 475 287 55 0 chr17 93738470 93738651 -1534000 + L1M2 LINE L1 4433 4623 -1520 3 1300 591 292 42 39 chr17 93738653 93738783 -1533868 - L1_Mur3 LINE L1 -1923 3957 3831 3 1300 793 263 187 16 chr17 93738783 93739088 -1533563 + ORR1E LTR MaLR 1 357 -2 3 1300 591 292 42 39 chr17 93739088 93739267 -1533384 - L1_Mur3 LINE L1 -2050 3830 3647 3 1300 1126 241 45 55 chr17 93739370 93739448 -1533203 - B4A SINE B4 -4 288 209 3 1300 194 0 39 0 chr17 93739448 93739474 -1533177 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1300 1126 241 45 55 chr17 93739474 93739685 -1532966 - B4A SINE B4 -84 208 2 3 1300 1264 232 111 57 chr17 93740079 93740431 -1532220 - ORR1C1 LTR MaLR -7 371 1 3 1300 22 35 0 0 chr17 93741388 93741417 -1531234 + AT_rich Low_complexity Low_complexity 1 29 0 3 1300 231 355 23 55 chr17 93741731 93741859 -1530792 - MER63B DNA AcHobo 0 436 313 3 1300 938 303 43 16 chr17 93741992 93742297 -1530354 + MLT1A1 LTR MaLR 84 396 -12 3 1300 13339 95 65 11 chr17 93742861 93745615 -1527036 + L1VL2 LINE L1 61 2989 -626 3 1300 339 338 48 14 chr17 93745945 93746092 -1526559 - L1M5 LINE L1 -2192 3954 3803 3 1300 245 127 0 45 chr17 93746103 93746169 -1526482 + A-rich Low_complexity Low_complexity 1 63 0 3 1300 25 65 0 0 chr17 93746824 93746870 -1525781 + AT_rich Low_complexity Low_complexity 1 46 0 3 1300 355 272 60 11 chr17 93747072 93747340 -1525311 + L1MEc LINE L1 992 1363 -5037 3 1300 189 195 0 0 chr17 93747440 93747481 -1525170 + (CTG)n Simple_repeat Simple_repeat 1 41 0 3 1300 513 220 22 0 chr17 93747488 93747579 -1525072 - B1F1 SINE Alu -33 116 24 3 1300 350 299 67 117 chr17 93747948 93748334 -1524317 + L1MD3 LINE L1 7500 7866 -129 3 1300 406 291 20 13 chr17 93748490 93748643 -1524008 + L1MEc LINE L1 1899 2052 -4348 3 1300 32 91 0 0 chr17 93748643 93748731 -1523920 + AT_rich Low_complexity Low_complexity 1 88 0 3 1300 394 298 11 0 chr17 93748752 93748846 -1523805 - RSINE1 SINE B4 -55 110 16 3 1300 283 323 40 0 chr17 93748866 93748990 -1523661 + L1MEc LINE L1 2058 2186 -4214 3 1300 1593 211 36 75 chr17 93749070 93749459 -1523192 + ORR1D1 LTR MaLR 1 374 0 4 1300 326 350 14 20 chr17 93749474 93749620 -1523031 + L1MEc LINE L1 2540 2684 -3635 3 1300 327 192 51 13 chr17 93749827 93749906 -1522745 + MTEb LTR MaLR 294 375 -4 4 1300 324 271 103 76 chr17 93750057 93750532 -1522119 + L1MD LINE L1 3008 3495 -2651 4 1300 852 270 17 72 chr17 93750553 93750844 -1521807 + B4 SINE B4 8 282 -10 4 1300 189 0 0 0 chr17 93750864 93750885 -1521766 + (CAGA)n Simple_repeat Simple_repeat 2 22 0 4 1300 243 146 0 0 chr17 93750932 93750973 -1521678 + (GGGA)n Simple_repeat Simple_repeat 4 44 0 4 1300 266 296 0 0 chr17 93751027 93751108 -1521543 + L1MEc LINE L1 3703 3783 -2536 3 1300 296 289 16 24 chr17 93751148 93751272 -1521379 + L1MEc LINE L1 3924 4046 -2273 3 1300 1000 101 19 0 chr17 93751408 93751567 -1521084 + (GAAA)n Simple_repeat Simple_repeat 2 163 0 4 1300 456 19 0 0 chr17 93751568 93751621 -1521030 + (GGGGA)n Simple_repeat Simple_repeat 1 53 0 4 1300 428 335 125 35 chr17 93751703 93751991 -1520660 - L1MEc LINE L1 -5519 881 568 4 1300 22 0 0 0 chr17 93752846 93752868 -1519783 + AT_rich Low_complexity Low_complexity 1 22 0 4 1300 378 61 0 0 chr17 93753138 93753187 -1519464 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 1300 1887 327 35 5 chr17 93753430 93754026 -1518625 - Lx8 LINE L1 -245 7228 6615 4 1300 915 222 24 19 chr17 93754139 93754350 -1518301 + B3 SINE B2 1 212 -4 4 1300 1816 259 73 6 chr17 93754572 93755054 -1517597 + RMER19C LTR ERVK 96 609 -2 4 1300 2514 193 11 35 chr17 93755633 93756169 -1516482 - L1_Mur3 LINE L1 -200 5680 5158 4 1300 2068 166 30 65 chr17 93756170 93756570 -1516081 + ORR1B1 LTR MaLR 1 386 -8 4 1300 277 169 17 0 chr17 93756574 93756633 -1516018 - L1_Mur3 LINE L1 -717 5160 5101 4 1300 1491 143 26 19 chr17 93756633 93756903 -1515748 - L1Md_A LINE L1 -1 6581 6310 4 1300 638 26 0 0 chr17 93756903 93756980 -1515671 + L1_Mus1 LINE L1 6242 6318 -249 4 1300 1339 205 0 7 chr17 93756975 93757250 -1515401 - L1_Mur3 LINE L1 -765 5115 4843 4 1300 5943 188 36 15 chr17 93757243 93758065 -1514586 - L1_Mur3 LINE L1 -2950 2930 2084 4 1300 210 91 0 0 chr17 93758065 93758098 -1514553 + (TTG)n Simple_repeat Simple_repeat 1 33 0 4 1300 5943 188 36 15 chr17 93758098 93758110 -1514541 - L1_Mur3 LINE L1 -3797 2083 2072 4 1300 315 122 0 0 chr17 93758110 93758159 -1514492 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 1300 5943 188 36 15 chr17 93758159 93758724 -1513927 - L1_Mur3 LINE L1 -3809 2071 1501 4 1300 1240 208 71 66 chr17 93758755 93759404 -1513247 + L1_Mur3 LINE L1 866 1503 -4374 4 1300 7145 98 6 2 chr17 93759405 93760454 -1512197 - L1_Mus3 LINE L1 -49 6589 5537 4 1300 10328 141 27 10 chr17 93760454 93762234 -1510417 - L1_Mus3 LINE L1 -906 4977 3167 4 1300 1135 221 36 12 chr17 93763030 93763323 -1509328 - Lx2B LINE L1 -57 7001 6606 4 1300 1478 129 12 29 chr17 93763324 93763564 -1509087 + L1_Mm LINE L1 5457 5692 -191 4 1300 10460 169 225 27 chr17 93763559 93766790 -1505861 - L1VL4 LINE L1 -1235 4642 765 4 1300 360 0 0 0 chr17 93767741 93767781 -1504870 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 1300 642 264 28 7 chr17 93768016 93768161 -1504490 - B1F SINE Alu -1 148 1 4 1300 23 0 0 0 chr17 93768163 93768186 -1504465 + AT_rich Low_complexity Low_complexity 1 23 0 4 1300 850 277 101 73 chr17 93768677 93769035 -1503616 - Lx6 LINE L1 -3 7457 7090 4 1300 330 281 0 68 chr17 93769051 93769139 -1503512 - B4 SINE B4 -206 86 5 4 1300 32 43 0 0 chr17 93769220 93769266 -1503385 + AT_rich Low_complexity Low_complexity 1 46 0 4 1300 294 366 72 33 chr17 93769291 93769622 -1503029 - MT2A LTR ERVL 0 533 190 4 1300 201 287 69 67 chr17 93769944 93770109 -1502542 + MIRb SINE MIR 13 195 -73 4 1300 234 292 46 0 chr17 93770336 93770401 -1502250 + LTR16B2 LTR ERVL 326 393 -69 4 1300 197 352 109 24 chr17 93770510 93770723 -1501928 - L2a LINE L2 -341 3085 2858 4 1300 212 164 36 18 chr17 93770743 93770777 -1501874 + (TCTG)n Simple_repeat Simple_repeat 1 36 0 4 1300 249 33 0 0 chr17 93770777 93770807 -1501844 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 4 1300 212 164 36 18 chr17 93770807 93770828 -1501823 + (TCTG)n Simple_repeat Simple_repeat 4 24 0 4 1300 196 362 152 19 chr17 93770838 93771049 -1501602 - L2a LINE L2 -631 2788 2550 4 1300 539 214 92 0 chr17 93771122 93771253 -1501398 - MTD LTR MaLR -14 405 263 4 1300 2716 206 130 14 chr17 93771574 93772050 -1500601 + L1_Mur2 LINE L1 778 1262 -5824 4 1300 1120 118 0 6 chr17 93772050 93772383 -1500268 + (GAA)n Simple_repeat Simple_repeat 1 331 0 4 1300 2716 197 57 6 chr17 93772383 93772999 -1499652 + L1_Mur2 LINE L1 1263 1908 -3972 4 1300 814 323 104 3 chr17 93772993 93773319 -1499332 + Lx8 LINE L1 6934 7292 -181 4 1300 2702 114 14 2 chr17 93773354 93773768 -1498883 + BGLII LTR ERVK 3 421 0 4 1300 669 117 0 0 chr17 93774086 93774214 -1498437 + (TC)n Simple_repeat Simple_repeat 1 128 0 4 1300 284 0 28 0 chr17 93774228 93774264 -1498387 + (GA)n Simple_repeat Simple_repeat 2 38 0 4 1300 432 42 0 0 chr17 93774738 93774790 -1497861 + L1_Mm LINE L1 5536 5616 -567 4 1300 8171 34 5 4 chr17 93774790 93775772 -1496879 + L1Md_F2 LINE L1 5588 6570 -12 4 1300 847 232 91 0 chr17 93775855 93776053 -1496598 + B3 SINE B2 1 216 0 4 1300 378 0 0 0 chr17 93777477 93777519 -1495132 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1300 356 314 69 0 chr17 93778090 93778108 -1494543 + B1F SINE Alu 2 110 -39 4 1300 484 214 0 0 chr17 93778108 93778192 -1494459 + ID_B1 SINE B4 105 188 -36 4 1300 219 114 0 0 chr17 93778253 93778288 -1494363 + (GA)n Simple_repeat Simple_repeat 1 35 0 4 1300 195 352 54 27 chr17 93778468 93778579 -1494072 + MIRb SINE MIR 86 199 -69 4 1300 454 366 98 49 chr17 93778725 93778982 -1493669 + B4 SINE B4 24 275 -17 4 1300 411 191 42 25 chr17 93779124 93779242 -1493409 + L1MA7 LINE L1 6166 6285 -6 4 1300 1343 278 90 60 chr17 93781080 93781781 -1490870 - L1MB3 LINE L1 -15 6168 5447 4 1300 23 0 0 0 chr17 93782046 93782069 -1490582 + AT_rich Low_complexity Low_complexity 1 23 0 4 1300 441 0 0 0 chr17 93782551 93782600 -1490051 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 1300 291 114 0 0 chr17 93783383 93783427 -1489224 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 4 1300 7376 156 54 19 chr17 93783427 93785541 -1487110 - Lx5 LINE L1 -16 7034 4843 4 1300 189 0 0 0 chr17 93785541 93785562 -1487089 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 4 1300 6883 142 46 16 chr17 93785562 93785759 -1486892 - Lx5 LINE L1 -1035 4842 4634 4 1300 1290 143 46 0 chr17 93785760 93785997 -1486654 + Lx5 LINE L1 4378 4625 -1252 4 1300 26 0 0 0 chr17 93786607 93786633 -1486018 + AT_rich Low_complexity Low_complexity 1 26 0 4 1300 7928 74 7 13 chr17 93786635 93787925 -1484726 - L1_Mus3 LINE L1 -7 6631 5345 4 1300 349 105 0 66 chr17 93787920 93787981 -1484670 + L1_Mus3 LINE L1 5318 5374 -509 4 1300 5916 58 0 0 chr17 93788358 93789093 -1483558 - L1Md_F2 LINE L1 -16 6566 5832 4 1300 364 57 0 40 chr17 93789094 93789170 -1483481 + L1Md_F2 LINE L1 5801 5869 -715 4 1300 453 36 0 0 chr17 93789223 93789278 -1483373 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1300 336 48 0 0 chr17 93789580 93789622 -1483029 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 4 1300 598 238 30 12 chr17 93790533 93790699 -1481952 - Lx6 LINE L1 0 7460 7292 4 1300 4000 102 7 12 chr17 93791031 93791618 -1481033 + L1_Mus4 LINE L1 6045 6628 -8 4 1300 195 42 0 0 chr17 93791618 93791642 -1481009 + (GGA)n Simple_repeat Simple_repeat 3 26 0 4 1300 1035 122 0 0 chr17 93791769 93791917 -1480734 + B1_Mus1 SINE Alu 1 148 0 4 1300 1370 19 0 0 chr17 93791920 93792076 -1480575 + L1Md_T LINE L1 5431 5586 -297 4 1300 8278 36 2 0 chr17 93792076 93793069 -1479582 + L1Md_T LINE L1 5587 6581 -1 4 1300 195 157 0 0 chr17 93793099 93793150 -1479501 + A-rich Low_complexity Low_complexity 1 51 0 4 1300 353 40 0 39 chr17 93794703 93794755 -1477896 + (CAAA)n Simple_repeat Simple_repeat 2 51 0 4 1300 621 288 135 89 chr17 93794766 93795025 -1477626 + B4 SINE B4 1 271 -21 4 1300 540 222 94 85 chr17 93795178 93795390 -1477261 + MLT1D LTR MaLR 292 505 0 4 1300 21 0 0 0 chr17 93795754 93795775 -1476876 + AT_rich Low_complexity Low_complexity 1 21 0 4 1300 295 311 205 0 chr17 93795928 93796118 -1476533 + MIRc SINE MIR 40 268 0 4 1300 218 283 0 0 chr17 93796368 93796421 -1476230 - MER5A DNA MER1_type -1 188 136 4 1300 384 59 0 0 chr17 93796446 93796497 -1476154 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 1300 21 36 0 0 chr17 93796925 93796953 -1475698 + AT_rich Low_complexity Low_complexity 1 28 0 4 1300 3872 158 12 14 chr17 93797104 93797793 -1474858 - Lx2B LINE L1 0 7000 6314 4 1300 310 250 0 14 chr17 93797793 93797862 -1474789 + Lx2A LINE L1 6238 6305 -703 4 1300 32 0 0 0 chr17 93798480 93798512 -1474139 + AT_rich Low_complexity Low_complexity 1 32 0 4 1300 19164 72 6 0 chr17 93798639 93801197 -1471454 + L1Md_F2 LINE L1 3016 5586 -297 4 1300 7910 52 5 3 chr17 93801197 93802191 -1470460 + L1Md_F2 LINE L1 5587 6582 0 4 1300 2267 125 6 20 chr17 93802196 93802554 -1470097 - L1_Mus3 LINE L1 -305 5578 5226 4 1300 7338 93 12 19 chr17 93802555 93803272 -1469379 + L1_Mus3 LINE L1 5592 6314 -324 4 1300 2716 95 16 13 chr17 93803272 93803656 -1468995 - IAPEY_LTR LTR ERVK 0 385 1 4 1300 7338 93 12 19 chr17 93803656 93803992 -1468659 + L1_Mus3 LINE L1 6315 6638 0 4 1300 206 237 13 0 chr17 93805003 93805079 -1467572 + (CATA)n Simple_repeat Simple_repeat 3 79 0 4 1300 298 359 0 0 chr17 93805099 93805119 -1467532 - ID_B1 SINE B4 -26 198 107 4 1300 306 306 0 0 chr17 93805119 93805191 -1467460 - PB1D10 SINE Alu -20 97 26 4 1300 1255 272 108 5 chr17 93805328 93805708 -1466943 + MTD LTR MaLR 1 419 0 4 1300 655 241 94 11 chr17 93805882 93806159 -1466492 - L1M4b LINE L1 -4481 2853 2554 4 1300 236 322 11 0 chr17 93806209 93806299 -1466352 - L1M4b LINE L1 -4921 2413 2323 4 1300 507 304 112 39 chr17 93806309 93806838 -1465813 - L1MB7 LINE L1 -21 6163 5576 4 1300 804 128 240 7 chr17 93806838 93806988 -1465663 - B2_Mm2 SINE B2 -9 186 2 4 1300 629 97 142 0 chr17 93807213 93807326 -1465325 - L1Md_F2 LINE L1 -3 6579 6451 4 1300 927 60 0 0 chr17 93807326 93807443 -1465208 + L1_Mus2 LINE L1 6159 6275 -291 4 1300 450 314 126 59 chr17 93807678 93808324 -1464327 - L1M4b LINE L1 -5044 1860 1127 4 1300 653 303 11 54 chr17 93809932 93810117 -1462534 + B4A SINE B4 109 285 -7 4 1300 194 247 0 13 chr17 93810121 93810199 -1462452 + (CATATA)n Simple_repeat Simple_repeat 4 80 0 4 1300 459 331 21 21 chr17 93810445 93810587 -1462064 + ID_B1 SINE B4 80 221 -3 4 1300 455 252 75 81 chr17 93812103 93812276 -1460375 - MTE2b LTR MaLR 0 419 199 4 1300 27 49 0 0 chr17 93812446 93812487 -1460164 + AT_rich Low_complexity Low_complexity 1 41 0 4 1300 419 155 0 12 chr17 93812683 93812768 -1459883 + (CA)n Simple_repeat Simple_repeat 2 85 0 4 1300 986 281 151 32 chr17 93812788 93813345 -1459306 - L1MA4A LINE L1 -377 5926 5274 5 1300 675 273 50 0 chr17 93813345 93813506 -1459145 - MTE2b LTR MaLR -210 169 1 4 1300 30 59 0 0 chr17 93813554 93813605 -1459046 + AT_rich Low_complexity Low_complexity 1 51 0 5 1300 13581 168 62 24 chr17 93814204 93815304 -1457347 + L1_Mur2 LINE L1 895 2085 -3792 5 1300 360 0 0 0 chr17 93815304 93815344 -1457307 + (TC)n Simple_repeat Simple_repeat 1 40 0 5 1300 501 80 0 0 chr17 93815344 93815418 -1457233 + (CA)n Simple_repeat Simple_repeat 1 75 0 5 1300 13581 165 62 31 chr17 93815418 93817539 -1455112 + L1_Mur2 LINE L1 2086 4221 -1656 5 1300 238 0 0 0 chr17 93817595 93817622 -1455029 + L1_Mm LINE L1 5560 5586 -297 5 1300 7568 59 26 4 chr17 93817623 93818597 -1454054 + L1Md_F2 LINE L1 5588 6582 0 5 1300 1891 209 34 15 chr17 93818600 93819007 -1453644 + Lx5 LINE L1 6636 7050 0 5 1300 274 183 0 27 chr17 93819024 93819097 -1453554 + CT-rich Low_complexity Low_complexity 2 72 0 5 1300 303 317 39 0 chr17 93819097 93819201 -1453450 - PB1D10 SINE Alu 0 117 10 5 1300 884 284 72 4 chr17 93819261 93819512 -1453139 - MTEb LTR MaLR -111 268 1 5 1300 24 32 0 0 chr17 93819593 93819624 -1453027 + AT_rich Low_complexity Low_complexity 1 31 0 5 1300 21 36 0 0 chr17 93819684 93819712 -1452939 + AT_rich Low_complexity Low_complexity 1 28 0 5 1300 513 47 0 0 chr17 93820915 93820979 -1451672 + (TTTTC)n Simple_repeat Simple_repeat 1 64 0 5 1300 681 47 0 0 chr17 93820980 93821065 -1451586 + (TC)n Simple_repeat Simple_repeat 2 86 0 5 1300 602 270 63 11 chr17 93821090 93821367 -1451284 + MLT2D LTR ERVL 11 366 -48 5 1300 639 213 62 120 chr17 93821542 93821734 -1450917 + RLTR11A2 LTR ERVK 10 190 -337 5 1300 302 280 45 45 chr17 93821733 93821845 -1450806 + BGLII_B LTR ERVK 303 414 -27 5 1300 292 184 0 84 chr17 93822445 93822528 -1450123 - Lx8 LINE L1 -1523 5950 5875 5 1300 225 280 0 0 chr17 93822637 93822687 -1449964 - Lx7 LINE L1 -2005 5691 5642 5 1300 378 0 0 0 chr17 93822755 93822797 -1449854 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 5 1300 237 167 0 0 chr17 93822843 93822879 -1449772 - Lx9 LINE L1 -1251 6393 6358 5 1300 565 286 119 28 chr17 93823332 93823584 -1449067 + B4A SINE B4 4 278 -14 5 1300 271 335 149 6 chr17 93824818 93824992 -1447659 - MIR SINE MIR -32 230 32 5 1300 276 53 0 0 chr17 93825453 93825491 -1447160 + (TC)n Simple_repeat Simple_repeat 1 38 0 5 1300 7557 129 16 7 chr17 93825515 93828816 -1443835 - L1_Mus3 LINE L1 -8 6630 361 5 1300 1199 215 145 18 chr17 93829074 93829406 -1443245 - ORR1D1 LTR MaLR 0 374 1 5 1300 252 326 14 123 chr17 93829599 93829762 -1442889 + PB1D10 SINE Alu 2 147 -2 5 1300 233 75 25 0 chr17 93830176 93830216 -1442435 + (TTTTTG)n Simple_repeat Simple_repeat 3 43 0 5 1300 558 323 25 71 chr17 93830356 93830709 -1441942 + RLTR15 LTR ERVK 5 341 -18 5 1300 452 357 134 8 chr17 93830797 93831043 -1441608 - MLT2E LTR ERVL -202 426 150 5 1300 450 283 43 1 chr17 93831289 93831492 -1441159 - L1MA5 LINE L1 -8 6292 6080 5 1300 2357 43 7 3 chr17 93832787 93833088 -1439563 - MTA_Mm LTR MaLR 0 396 95 5 1300 363 60 0 0 chr17 93833196 93833246 -1439405 + (TTA)n Simple_repeat Simple_repeat 2 51 0 5 1300 1115 82 0 0 chr17 93833250 93833397 -1439254 - B1_Mm SINE Alu 0 147 1 5 1300 186 257 127 14 chr17 93833423 93833494 -1439157 + MIRc SINE MIR 7 85 -183 5 1300 3665 66 20 4 chr17 93833956 93834444 -1438207 - LTRIS2 LTR ERV1 0 564 69 5 1300 243 333 14 0 chr17 93834843 93834912 -1437739 + ID4_ SINE ID 1 70 -13 5 1300 242 336 83 7 chr17 93834976 93835120 -1437531 + L1M7 LINE L1 247 401 -5817 5 1300 973 96 0 82 chr17 93835212 93835371 -1437280 + B1_Mm SINE Alu 2 147 0 5 1300 215 191 64 0 chr17 93836104 93836151 -1436500 + T-rich Low_complexity Low_complexity 66 115 0 5 1300 401 313 164 30 chr17 93836492 93836679 -1435972 + MLT1J1-int LTR MaLR 893 1106 -281 5 1300 407 289 111 57 chr17 93836679 93836958 -1435693 + RLTR15 LTR ERVK 1 294 -65 5 1300 288 333 11 0 chr17 93836986 93837076 -1435575 + MLT1J1 LTR MaLR 104 194 -250 5 1300 291 54 0 0 chr17 93837173 93837210 -1435441 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1300 470 277 32 40 chr17 93837234 93837358 -1435293 - RSINE1 SINE B4 -42 123 1 5 1300 381 351 70 15 chr17 93837488 93837818 -1434833 + L1M7 LINE L1 1361 1708 -4510 5 1300 339 105 0 0 chr17 93838297 93838354 -1434297 + (TTTG)n Simple_repeat Simple_repeat 4 60 0 5 1300 1167 68 0 7 chr17 93838354 93838503 -1434148 - B1_Mus1 SINE Alu 0 148 1 5 1300 2331 133 24 5 chr17 93839095 93839472 -1433179 + ORR1C2 LTR MaLR 1 384 0 5 1300 470 272 105 36 chr17 93839693 93839941 -1432710 + L1MB8 LINE L1 5874 6138 -40 5 1300 466 267 122 30 chr17 93840119 93840316 -1432335 + Lx8 LINE L1 7116 7330 -143 5 1300 342 0 0 0 chr17 93840319 93840357 -1432294 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1300 251 261 0 11 chr17 93840381 93840470 -1432181 + Lx8 LINE L1 7385 7472 -1 5 1300 264 59 0 0 chr17 93841704 93841738 -1430913 + (TC)n Simple_repeat Simple_repeat 1 34 0 5 1300 993 245 5 0 chr17 93841885 93842085 -1430566 + B3 SINE B2 3 203 -13 5 1300 22 80 0 0 chr17 93842106 93842156 -1430495 + AT_rich Low_complexity Low_complexity 1 50 0 5 1300 236 333 9 19 chr17 93842208 93842315 -1430336 - MARNA DNA Mariner -107 479 374 5 1300 315 359 66 0 chr17 93842431 93842537 -1430114 - PB1D10 SINE Alu -2 115 3 5 1300 183 100 0 0 chr17 93842639 93842669 -1429982 + (GAAAA)n Simple_repeat Simple_repeat 3 32 0 5 1300 329 305 217 8 chr17 93842688 93842923 -1429728 + B4 SINE B4 5 288 -4 5 1300 21 0 0 0 chr17 93843370 93843391 -1429260 + AT_rich Low_complexity Low_complexity 1 21 0 5 1300 364 273 103 0 chr17 93844174 93844364 -1428287 - L1MA7 LINE L1 -7 6305 6097 5 1300 357 322 54 34 chr17 93844799 93844947 -1427704 + MER58A DNA MER1_type 50 200 -24 5 1300 219 36 0 0 chr17 93846154 93846182 -1426469 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 5 1300 775 138 46 7 chr17 93846686 93846839 -1425812 - L1VL2 LINE L1 -6061 274 116 5 1300 333 0 0 0 chr17 93846903 93846940 -1425711 + (TTTG)n Simple_repeat Simple_repeat 3 39 0 5 1301 531 31 0 0 chr17 93847906 93847971 -1424680 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1301 312 358 33 11 chr17 93847980 93848161 -1424490 - RLTR15 LTR ERVK -73 286 102 5 1301 253 301 9 37 chr17 93848209 93848316 -1424335 - RLTR15 LTR ERVK -186 173 70 5 1301 530 234 0 26 chr17 93848312 93848426 -1424225 - B1_Mur1 SINE Alu -36 113 3 5 1301 207 356 0 0 chr17 93848454 93848513 -1424138 + MIRb SINE MIR 28 86 -182 5 1301 319 151 0 0 chr17 93848648 93848701 -1423950 + Lx4A LINE L1 6387 6439 -619 5 1301 4837 142 93 9 chr17 93849016 93849861 -1422790 + Lx4A LINE L1 6124 7039 -19 5 1301 428 51 0 17 chr17 93849861 93849921 -1422730 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 5 1301 801 231 65 5 chr17 93849976 93850176 -1422475 - B3 SINE B2 0 216 5 5 1301 445 261 70 0 chr17 93850318 93850460 -1422191 - L1M2 LINE L1 -986 5157 5006 5 1301 527 279 126 19 chr17 93851061 93851379 -1421272 - L1ME1 LINE L1 -188 5991 5640 5 1301 292 148 18 18 chr17 93851387 93851442 -1421209 + MLT2B4 LTR ERVL 2 56 -358 5 1301 282 56 0 0 chr17 93851480 93851516 -1421135 + (GGGAGA)n Simple_repeat Simple_repeat 6 41 0 5 1301 573 379 64 25 chr17 93851534 93851896 -1420755 + MLT2B4 LTR ERVL 93 446 -69 5 1301 309 296 44 44 chr17 93851992 93852197 -1420454 - L1ME1 LINE L1 -716 5463 5259 5 1301 374 325 81 51 chr17 93852222 93852556 -1420095 - L1MC LINE L1 -912 5234 4891 5 1301 315 273 291 11 chr17 93852847 93852864 -1419787 - ID4_ SINE ID -55 97 77 5 1301 248 0 0 30 chr17 93852864 93852897 -1419754 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 1301 315 273 56 11 chr17 93852897 93852968 -1419683 - ID4_ SINE ID -72 80 5 5 1301 23 54 0 0 chr17 93852971 93853008 -1419643 + AT_rich Low_complexity Low_complexity 1 37 0 5 1301 7152 191 20 19 chr17 93853021 93855023 -1417628 - Lx4B LINE L1 -29 7029 5022 5 1301 4036 69 16 18 chr17 93855039 93855586 -1417065 - L1_Mus1 LINE L1 -4 6563 6018 5 1301 3128 112 43 2 chr17 93855586 93856079 -1416572 + L1_Mur2 LINE L1 4486 4998 -879 5 1301 22 0 0 0 chr17 93856289 93856311 -1416340 + AT_rich Low_complexity Low_complexity 1 22 0 5 1301 428 312 64 0 chr17 93856618 93856727 -1415924 - B1_Mur4 SINE Alu -34 116 1 5 1301 1841 79 8 0 chr17 93857274 93857527 -1415124 - L1_Mus2 LINE L1 -14 6552 6298 5 1301 2425 100 9 0 chr17 93857527 93857856 -1414795 + L1_Mm LINE L1 5486 5817 -66 5 1301 22 0 0 0 chr17 93857856 93857878 -1414773 + AT_rich Low_complexity Low_complexity 1 22 0 5 1301 462 293 142 14 chr17 93857878 93858096 -1414555 - Lx8 LINE L1 -2 7471 7226 5 1301 207 114 0 28 chr17 93859199 93859235 -1413416 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 1301 510 289 28 7 chr17 93859359 93859502 -1413149 + RSINE1 SINE B4 1 146 -19 5 1301 26 74 0 0 chr17 93859509 93859563 -1413088 + AT_rich Low_complexity Low_complexity 1 54 0 5 1301 684 109 0 0 chr17 93860496 93860606 -1412045 - L1_Mus1 LINE L1 0 6567 6458 5 1301 23 33 0 0 chr17 93860618 93860648 -1412003 + AT_rich Low_complexity Low_complexity 1 30 0 5 1301 342 341 0 22 chr17 93860835 93860925 -1411726 - RSINE1 SINE B4 -4 161 74 5 1301 386 352 0 120 chr17 93861105 93861289 -1411362 - RSINE1 SINE B4 -2 163 2 5 1301 716 322 120 76 chr17 93861394 93861878 -1410773 - MLT1D LTR MaLR 0 505 1 5 1301 1058 100 0 12 chr17 93862015 93862187 -1410464 + (TTTTC)n Simple_repeat Simple_repeat 5 174 0 5 1301 230 56 0 27 chr17 93864627 93864664 -1407987 + (TAA)n Simple_repeat Simple_repeat 1 36 0 5 1301 23 0 0 0 chr17 93864743 93864766 -1407885 + AT_rich Low_complexity Low_complexity 1 23 0 6 1301 1904 169 85 0 chr17 93865145 93865499 -1407152 - ORR1C2 LTR MaLR 0 384 1 6 1301 315 0 0 0 chr17 93865791 93865826 -1406825 + (TA)n Simple_repeat Simple_repeat 2 36 0 6 1301 366 256 16 16 chr17 93865833 93865956 -1406695 - L1MB3 LINE L1 -34 6149 6027 6 1301 1219 143 242 18 chr17 93865987 93866322 -1406329 + RMER17C LTR ERVK 1 410 0 6 1301 862 152 11 76 chr17 93866554 93866572 -1406079 - RMER17C LTR ERVK 0 410 393 6 1301 3046 68 0 0 chr17 93866572 93866969 -1405682 + L1Md_T LINE L1 6186 6582 0 6 1301 862 152 11 76 chr17 93866969 93867135 -1405516 - RMER17C LTR ERVK -18 392 238 6 1301 431 189 113 21 chr17 93867111 93867208 -1405443 - RMER17C LTR ERVK -304 106 1 6 1301 1710 16 0 0 chr17 93867399 93867590 -1405061 - B2_Mm1a SINE B2 -2 191 1 6 1301 399 278 86 83 chr17 93868119 93868433 -1404218 + L1MC4 LINE L1 7226 7540 -502 6 1301 1011 61 0 0 chr17 93870265 93870396 -1402255 + (GGAAA)n Simple_repeat Simple_repeat 5 135 0 6 1301 336 257 120 28 chr17 93870402 93870510 -1402141 - MTD LTR MaLR -299 120 3 6 1301 1089 295 20 14 chr17 93870829 93871186 -1401465 + ORR1E LTR MaLR 1 359 0 6 1301 3087 183 45 48 chr17 93871490 93872134 -1400517 + RLTR26 LTR ERVK 1 642 0 6 1301 522 154 65 0 chr17 93873023 93873131 -1399520 + RMER6C LTR ERVK 1 154 -566 6 1301 1077 88 7 7 chr17 93873167 93873315 -1399336 - B1_Mus1 SINE Alu 0 148 1 6 1301 301 172 141 0 chr17 93873315 93873379 -1399272 + RMER6C LTR ERVK 91 163 -593 6 1301 279 0 0 0 chr17 93873399 93873430 -1399221 + (A)n Simple_repeat Simple_repeat 1 31 0 6 1301 749 172 0 88 chr17 93873524 93873639 -1399012 + RMER6C LTR ERVK 546 651 -39 6 1301 1424 74 11 0 chr17 93873639 93873829 -1398822 - B2_Mm1t SINE B2 -1 192 1 6 1301 749 172 0 88 chr17 93873829 93873872 -1398779 + RMER6C LTR ERVK 652 690 0 6 1301 515 306 119 30 chr17 93873885 93874087 -1398564 - MTEa LTR MaLR -159 220 1 6 1301 255 356 42 68 chr17 93874225 93874415 -1398236 - MLT1A1 LTR MaLR -205 203 19 6 1301 696 342 88 11 chr17 93874660 93875104 -1397547 + L1MCa LINE L1 18 495 -6013 6 1301 5953 72 15 6 chr17 93875108 93875909 -1396742 + RLTR13C2 LTR ERVK 1 808 0 6 1301 282 367 31 19 chr17 93876013 93876174 -1396477 + L1MCa LINE L1 556 718 -5790 6 1301 337 310 99 6 chr17 93876254 93876426 -1396225 + L1MCb LINE L1 768 955 -5090 6 1301 885 297 104 40 chr17 93876559 93877526 -1395125 + L1MCb LINE L1 2731 3759 -2805 6 1301 2408 158 174 100 chr17 93877526 93878167 -1394484 + RMER6C LTR ERVK 1 688 -2 6 1301 526 253 102 64 chr17 93878167 93878559 -1394092 + L1MCb LINE L1 3752 4158 -2406 6 1301 2423 210 57 11 chr17 93878659 93879322 -1393329 + L1_Rod LINE L1 2345 3038 -2809 6 1301 453 305 71 41 chr17 93879579 93879846 -1392805 + RMER2 LTR ERV1 293 567 0 6 1301 1652 190 67 90 chr17 93879847 93880328 -1392323 + MT2B LTR ERVL 23 601 0 6 1301 1723 221 77 67 chr17 93880359 93880766 -1391885 + L1_Rod LINE L1 3082 3500 -2347 6 1301 729 0 0 0 chr17 93880766 93880847 -1391804 + (GGAA)n Simple_repeat Simple_repeat 2 82 0 6 1301 1723 221 77 67 chr17 93880847 93881167 -1391484 + L1_Rod LINE L1 3501 3816 -2031 6 1301 305 324 49 24 chr17 93881195 93881442 -1391209 + L1MC2 LINE L1 5851 6103 -241 6 1301 239 118 0 0 chr17 93881448 93881482 -1391169 - RLTR25A LTR ERVK 0 1103 1070 6 1301 4882 156 110 11 chr17 93881601 93882527 -1390124 - RLTR25A LTR ERVK -31 1072 55 6 1301 471 63 0 0 chr17 93882729 93882792 -1389859 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 6 1301 22 35 0 0 chr17 93884343 93884372 -1388279 + AT_rich Low_complexity Low_complexity 1 29 0 6 1301 1226 117 22 0 chr17 93884930 93885109 -1387542 + B2_Mm2 SINE B2 2 184 -11 6 1301 477 34 0 0 chr17 93885109 93885168 -1387483 + (GA)n Simple_repeat Simple_repeat 2 60 0 6 1301 454 333 78 24 chr17 93885337 93885406 -1387245 - B4 SINE B4 -6 286 215 6 1301 456 19 0 0 chr17 93885406 93885459 -1387192 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 6 1301 454 333 78 24 chr17 93885459 93885595 -1387056 - B4 SINE B4 -78 214 70 6 1301 212 0 36 0 chr17 93886249 93886277 -1386374 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 1301 1121 68 0 7 chr17 93886277 93886425 -1386226 - B1_Mus1 SINE Alu 0 148 2 6 1301 2187 184 27 19 chr17 93886430 93886840 -1385811 - MTC LTR MaLR -8 413 1 6 1301 212 283 105 32 chr17 93887518 93887613 -1385038 + L2c LINE L2 3283 3384 -3 6 1301 301 301 217 23 chr17 93888160 93888381 -1384270 - HAL1 LINE L1 -701 1806 1543 6 1301 537 174 67 12 chr17 93888570 93888703 -1383948 - B1_Mur2 SINE Alu -1 148 9 6 1301 227 340 96 10 chr17 93888611 93888715 -1383936 - B4A SINE B4 -98 194 82 6 1301 258 325 70 16 chr17 93889192 93889320 -1383331 - MIRb SINE MIR -121 147 13 6 1301 1324 72 33 0 chr17 93890046 93890226 -1382425 + B2_Mm2 SINE B2 1 186 -9 6 1301 450 291 96 32 chr17 93890336 93890648 -1382003 - L1MA6 LINE L1 -75 6225 5894 6 1301 548 185 7 27 chr17 93890643 93890800 -1381851 - L1MA6 LINE L1 -814 5486 5338 6 1301 203 32 65 0 chr17 93890864 93890895 -1381756 + (TTTG)n Simple_repeat Simple_repeat 3 35 0 6 1301 529 304 81 7 chr17 93890904 93891176 -1381475 - L1MA6 LINE L1 -2487 3656 3365 6 1301 566 236 22 33 chr17 93891189 93891373 -1381278 - L1MA6 LINE L1 -3752 2391 2210 6 1301 1165 75 0 0 chr17 93891496 93891642 -1381009 - B1_Mus2 SINE Alu 0 147 2 6 1301 39594 23 4 6 chr17 93891787 93898020 -1374631 - L1Md_T LINE L1 -1 6581 364 6 1301 293 312 12 0 chr17 93898019 93898099 -1374552 - Lx8 LINE L1 -844 6629 6549 6 1301 902 119 13 0 chr17 93898109 93898260 -1374391 + (GAAA)n Simple_repeat Simple_repeat 2 154 0 6 1301 412 305 19 19 chr17 93898284 93898441 -1374210 - Lx8 LINE L1 -987 6486 6330 6 1301 323 311 33 25 chr17 93898486 93898608 -1374043 - Lx8 LINE L1 -1155 6318 6196 6 1301 31230 86 7 45 chr17 93898864 93904223 -1368428 + L1Md_F2 LINE L1 217 5585 -298 6 1301 7871 61 0 0 chr17 93904224 93905208 -1367443 + L1Md_F2 LINE L1 5587 6570 -12 6 1301 344 235 305 21 chr17 93905382 93905576 -1367075 + L1M2 LINE L1 3974 4222 -1918 6 1301 1956 176 11 29 chr17 93905713 93906093 -1366558 + Lx2 LINE L1 6606 6978 -19 6 1301 1555 145 65 0 chr17 93906115 93906377 -1366274 - Lx3A LINE L1 -116 6865 6587 6 1301 3899 129 21 6 chr17 93906372 93906997 -1365654 + Lx3B LINE L1 5970 6603 -370 6 1301 3102 93 73 21 chr17 93906989 93907507 -1365144 - L1_Mur1 LINE L1 -2402 3484 2940 6 1301 1015 279 191 11 chr17 93907555 93908286 -1364365 + L1M2 LINE L1 4386 5253 -887 6 1301 225 388 29 0 chr17 93909434 93909537 -1363114 + L3 LINE CR1 4306 4411 -78 6 1301 286 372 41 30 chr17 93909680 93909849 -1362802 - MER5B DNA MER1_type 0 178 8 6 1301 14440 158 13 62 chr17 93910615 93914115 -1358536 - L1Md_F LINE L1 -2328 3555 244 6 1301 331 187 0 13 chr17 93914121 93914197 -1358454 - L1_Mur3 LINE L1 -1204 4676 4602 6 1301 1831 206 50 6 chr17 93914195 93914675 -1357976 - L1_Mur3 LINE L1 -2362 3518 3018 6 1301 932 251 146 30 chr17 93914789 93915078 -1357573 + L1_Mur3 LINE L1 3987 4309 -1571 6 1301 1200 98 0 0 chr17 93915078 93915251 -1357400 + (TATATG)n Simple_repeat Simple_repeat 2 174 0 6 1301 932 251 146 30 chr17 93915251 93915535 -1357116 + L1_Mur3 LINE L1 4310 4626 -1254 6 1301 383 267 130 35 chr17 93915535 93915909 -1356742 - RLTR40 LTR ERVK -41 776 299 6 1301 233 191 44 0 chr17 93915936 93916004 -1356647 + CT-rich Low_complexity Low_complexity 2 72 0 6 1301 311 186 28 14 chr17 93916012 93916083 -1356568 - RLTR40 LTR ERVK -533 284 213 6 1301 364 109 156 0 chr17 93916084 93916148 -1356503 + B2_Mm2 SINE B2 8 81 -114 6 1301 241 227 133 0 chr17 93916086 93916161 -1356490 + RSINE1 SINE B4 11 95 -70 6 1301 342 319 80 32 chr17 93916164 93916352 -1356299 - RLTR40 LTR ERVK -602 215 19 6 1301 1164 55 0 7 chr17 93916454 93916602 -1356049 + B1_Mus1 SINE Alu 2 148 0 6 1301 198 71 0 0 chr17 93916604 93916632 -1356019 + (A)n Simple_repeat Simple_repeat 1 28 0 6 1301 708 299 116 41 chr17 93916695 93917471 -1355180 + L1MA4A LINE L1 5006 5908 -395 6 1301 203 364 32 24 chr17 93917695 93917819 -1354832 - L2 LINE L2 -1121 2298 2174 6 1301 289 267 0 0 chr17 93918363 93918423 -1354228 + RSINE1 SINE B4 3 62 -103 6 1301 7597 92 3 8 chr17 93918648 93919744 -1352907 - L1_Mus3 LINE L1 -7 6631 5542 6 1301 2693 50 44 3 chr17 93919744 93920104 -1352547 - L1Md_F3 LINE L1 -1 6583 6209 6 1301 9242 45 3 2 chr17 93920106 93921360 -1351291 - L1Md_F2 LINE L1 -590 5992 4738 6 1301 2259 157 22 2 chr17 93921361 93921763 -1350888 - L1_Mm LINE L1 -329 5554 5145 6 1301 288 91 0 0 chr17 93921786 93921830 -1350821 + (TTA)n Simple_repeat Simple_repeat 2 45 0 6 1301 1129 69 7 0 chr17 93921834 93921979 -1350672 - B1_Mm SINE Alu -1 146 1 6 1301 356 254 112 24 chr17 93921992 93922198 -1350453 - Charlie1a DNA MER1_type -15 1440 1217 6 1301 261 0 0 0 chr17 93923398 93923427 -1349224 + (A)n Simple_repeat Simple_repeat 1 29 0 6 1301 203 297 20 81 chr17 93923705 93923804 -1348847 + MER5B DNA MER1_type 1 93 -85 6 1301 3072 78 2 2 chr17 93924534 93924930 -1347721 + MTA_Mm LTR MaLR 1 396 0 6 1301 237 33 0 0 chr17 93924955 93924985 -1347666 + (TTG)n Simple_repeat Simple_repeat 2 31 0 6 1301 238 320 80 0 chr17 93926789 93926864 -1345787 + ID4_ SINE ID 1 81 -2 6 1301 253 0 54 0 chr17 93927140 93927177 -1345474 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 6 1301 423 0 0 0 chr17 93927382 93927429 -1345222 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 6 1301 440 292 32 24 chr17 93928438 93928561 -1344090 + RSINE1 SINE B4 4 127 -38 6 1301 252 281 91 86 chr17 93928561 93928625 -1344026 + B2_Mm2 SINE B2 3 190 -5 6 1301 378 355 117 41 chr17 93929876 93930415 -1342236 - L2a LINE L2 -1 3425 2841 6 1301 1777 181 62 6 chr17 93930741 93931096 -1341555 + Lx LINE L1 6278 6652 -2 6 1301 280 300 68 12 chr17 93932265 93932462 -1340189 + L1MA6 LINE L1 1638 1805 -4301 6 1301 800 290 97 30 chr17 93932526 93932692 -1339959 + L1MA6 LINE L1 4674 4848 -2255 6 1301 3538 46 0 5 chr17 93932692 93933128 -1339523 + L1Md_F2 LINE L1 6136 6569 -13 6 1301 800 290 97 30 chr17 93933128 93933469 -1339182 + L1MA6 LINE L1 4849 5215 -1888 6 1301 55 48 0 0 chr17 93933471 93933554 -1339097 + AT_rich Low_complexity Low_complexity 1 83 0 6 1301 341 268 105 0 chr17 93933554 93933707 -1338944 + L1M2 LINE L1 5318 5486 -814 6 1301 56 67 0 0 chr17 93933707 93933812 -1338839 + AT_rich Low_complexity Low_complexity 1 105 0 6 1301 1092 105 0 0 chr17 93933812 93933955 -1338696 + B1_Mus1 SINE Alu 1 143 -5 6 1301 478 242 226 15 chr17 93933955 93934246 -1338405 + L1MA6 LINE L1 5203 5542 -1561 6 1301 256 287 0 0 chr17 93934290 93934377 -1338274 + L1MA6 LINE L1 5638 5724 -1379 6 1301 676 291 28 8 chr17 93934533 93934782 -1337869 + L1MA6 LINE L1 5754 6007 -1096 6 1301 348 83 0 0 chr17 93934813 93934861 -1337790 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 6 1301 914 269 115 58 chr17 93934861 93935750 -1336901 + L1MA6 LINE L1 6135 7075 -185 6 1301 299 301 10 51 chr17 93935813 93935911 -1336740 - B4A SINE B4 -10 282 189 6 1301 234 310 0 14 chr17 93936067 93936139 -1336512 + ID2 SINE ID 1 71 -12 6 1301 319 275 36 36 chr17 93936203 93936399 -1336252 + L1MC4 LINE L1 2074 2269 -3946 6 1301 1125 69 0 0 chr17 93937267 93937412 -1335239 + B1_Mm SINE Alu 1 145 -2 7 1301 264 56 74 0 chr17 93937733 93937787 -1334864 + (TTTTTG)n Simple_repeat Simple_repeat 3 60 0 7 1301 2530 124 74 23 chr17 93937789 93938261 -1334390 - Lx LINE L1 -3 6651 6156 7 1301 357 308 125 75 chr17 93938290 93938490 -1334161 - B4 SINE B4 -56 236 27 7 1301 237 157 39 19 chr17 93938877 93938929 -1333722 - B3A SINE B2 -105 93 41 7 1301 1673 172 64 123 chr17 93938923 93939402 -1333249 + RLTR25B LTR ERVK 371 913 -115 7 1301 213 39 0 0 chr17 93939402 93939428 -1333223 + (GGGA)n Simple_repeat Simple_repeat 4 29 0 7 1301 564 218 33 53 chr17 93939428 93939534 -1333117 + RLTR25B LTR ERVK 914 1023 -5 7 1301 7360 177 48 14 chr17 93939751 93941486 -1331165 - Lx5 LINE L1 -12 7038 5246 7 1301 7321 90 30 0 chr17 93941519 93942647 -1330004 - L1_Mus3 LINE L1 -7 6631 5472 7 1301 1426 104 173 11 chr17 93942681 93942953 -1329698 + RLTR10A LTR ERVK 96 411 0 7 1301 2432 149 30 9 chr17 93942954 93943393 -1329258 - L1_Mus3 LINE L1 -407 5476 5029 7 1301 764 148 0 0 chr17 93943418 93943546 -1329105 - Lx5 LINE L1 -1257 4623 4496 7 1301 13872 133 25 49 chr17 93943546 93947140 -1325511 - L1VL4 LINE L1 -1878 4008 491 7 1301 531 338 115 32 chr17 93947479 93947696 -1324955 + B4 SINE B4 48 282 -10 7 1301 25 0 0 0 chr17 93947949 93947974 -1324677 + AT_rich Low_complexity Low_complexity 1 25 0 7 1301 8043 131 31 10 chr17 93947974 93949567 -1323084 - Lx3A LINE L1 0 6981 5352 7 1301 684 94 2 0 chr17 93949564 93949661 -1322990 - Lx3_Mus LINE L1 -1336 5673 5570 7 1301 633 270 78 18 chr17 93950003 93950169 -1322482 - B3 SINE B2 -40 176 1 7 1301 24 0 0 0 chr17 93950290 93950314 -1322337 + AT_rich Low_complexity Low_complexity 1 24 0 7 1301 610 323 0 36 chr17 93950654 93950847 -1321804 + B3A SINE B2 13 198 0 7 1301 1148 251 108 12 chr17 93951624 93951967 -1320684 + MTEb LTR MaLR 1 376 -3 7 1301 1085 68 0 58 chr17 93952170 93952311 -1320340 + B1_Mus2 SINE Alu 2 135 -12 7 1301 333 62 0 0 chr17 93952311 93952359 -1320292 + (CAAAC)n Simple_repeat Simple_repeat 2 49 0 7 1301 1085 68 0 58 chr17 93952359 93952372 -1320279 + B1_Mus2 SINE Alu 136 147 0 7 1301 3287 74 0 0 chr17 93952573 93953006 -1319645 + L1Md_T LINE L1 6150 6582 0 7 1301 39 38 0 0 chr17 93953381 93953434 -1319217 + AT_rich Low_complexity Low_complexity 1 53 0 7 1301 196 292 0 97 chr17 93953698 93953770 -1318881 - MIRc SINE MIR -91 171 107 7 1301 424 279 81 35 chr17 93953833 93954107 -1318544 + L1MA5 LINE L1 5628 5918 -382 7 1301 1829 173 63 3 chr17 93954107 93954454 -1318197 - RLTR9A LTR ERVK 0 368 1 7 1301 398 272 94 41 chr17 93954454 93954474 -1318177 + L1MA5 LINE L1 5919 5936 -364 7 1301 257 224 254 0 chr17 93954860 93954927 -1317724 + PB1D7 SINE Alu 3 86 -34 7 1301 210 71 0 0 chr17 93955481 93955509 -1317142 + (T)n Simple_repeat Simple_repeat 1 28 0 7 1301 488 328 122 42 chr17 93955615 93955927 -1316724 + MER2 DNA MER2_type 8 344 -1 7 1301 339 339 61 96 chr17 93956179 93956440 -1316211 + MLT1E1 LTR MaLR 137 388 -239 7 1301 535 289 57 43 chr17 93956444 93956585 -1316066 + RSINE1 SINE B4 3 145 -20 7 1301 230 312 26 26 chr17 93956729 93956844 -1315807 + PB1D10 SINE Alu 3 117 0 7 1301 431 326 119 21 chr17 93956855 93957049 -1315602 + MLT1E1 LTR MaLR 440 652 -2 7 1301 281 254 30 0 chr17 93957189 93957256 -1315395 - L2a LINE L2 0 3426 3358 7 1301 502 321 45 54 chr17 93957256 93957480 -1315171 - RMER12 LTR ERVK 0 1322 1101 7 1301 5040 119 17 11 chr17 93957663 93958467 -1314184 - RLTR22_Mur LTR ERVK -1017 831 23 7 1301 236 369 13 88 chr17 93958631 93958869 -1313782 - L2 LINE L2 -557 2862 2643 7 1301 25 0 0 0 chr17 93959852 93959877 -1312774 + AT_rich Low_complexity Low_complexity 1 25 0 7 1301 212 352 11 11 chr17 93961033 93961122 -1311529 + MIRc SINE MIR 95 183 -85 7 1301 30 69 0 0 chr17 93961615 93961673 -1310978 + AT_rich Low_complexity Low_complexity 1 58 0 7 1301 2767 209 71 22 chr17 93961676 93962352 -1310299 - Lx2B LINE L1 -92 6908 6200 7 1301 23 0 0 0 chr17 93962354 93962377 -1310274 + AT_rich Low_complexity Low_complexity 1 23 0 7 1301 363 23 0 0 chr17 93962481 93962525 -1310126 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 1301 23 54 0 0 chr17 93962745 93962782 -1309869 + AT_rich Low_complexity Low_complexity 1 37 0 7 1301 415 273 65 49 chr17 93963564 93963749 -1308902 + RLTR10D LTR ERVK 172 359 0 7 1301 234 290 131 15 chr17 93963947 93964206 -1308445 + L1M4 LINE L1 3874 4162 -1984 7 1301 322 309 178 30 chr17 93964307 93964650 -1308001 + L1M4 LINE L1 4384 4759 -1387 7 1301 256 269 111 14 chr17 93964782 93964997 -1307654 + L1M4 LINE L1 5277 5505 -659 7 1301 303 269 31 31 chr17 93965019 93965115 -1307536 + L1M4 LINE L1 5576 5671 -508 7 1301 703 223 266 0 chr17 93965185 93965414 -1307237 - Lx2B LINE L1 -2 6998 6709 7 1301 254 282 50 25 chr17 93966314 93966394 -1306257 - MTE2a LTR MaLR -17 362 281 7 1301 187 175 17 17 chr17 93966513 93966571 -1306080 + GA-rich Low_complexity Low_complexity 2 59 0 7 1301 318 371 98 41 chr17 93966721 93967109 -1305542 + LTR16A LTR ERVL 30 439 -12 7 1301 325 305 110 46 chr17 93968332 93968614 -1304037 + L1M2 LINE L1 4880 5179 -964 7 1301 4989 119 35 0 chr17 93968614 93969573 -1303078 - Lx LINE L1 -299 6355 5357 7 1301 7547 86 19 3 chr17 93969567 93970726 -1301925 - L1_Mus3 LINE L1 -2 6636 5464 7 1301 679 80 0 0 chr17 93970698 93970786 -1301865 - L1_Mus3 LINE L1 -490 6148 6061 7 1301 579 314 52 0 chr17 93971627 93971780 -1300871 - B4A SINE B4 -2 290 130 7 1301 24 32 0 0 chr17 93971845 93971876 -1300775 + AT_rich Low_complexity Low_complexity 1 31 0 7 1301 426 141 0 13 chr17 93971939 93972018 -1300633 - RMER1C Other Other -4 1338 1261 7 1301 1641 250 269 14 chr17 93972144 93972859 -1299792 - RMER1B Other Other -171 895 25 7 1301 344 314 45 81 chr17 93973977 93974088 -1298563 - B1_Mur1 SINE Alu -42 107 1 7 1301 240 35 0 0 chr17 93974103 93974132 -1298519 + (CAA)n Simple_repeat Simple_repeat 2 30 0 7 1301 287 296 78 10 chr17 93974136 93974341 -1298310 + L1MA6 LINE L1 4636 4854 -1289 7 1301 275 231 0 0 chr17 93974327 93974379 -1298272 - Lx8 LINE L1 -142 7331 7280 7 1301 875 298 89 62 chr17 93974692 93975129 -1297522 - MER31B LTR ERV1 -13 453 5 7 1301 838 165 12 0 chr17 93975623 93975793 -1296858 + (TA)n Simple_repeat Simple_repeat 2 173 0 7 1301 2960 84 7 7 chr17 93976064 93976485 -1296166 + BGLII LTR ERVK 1 421 0 7 1301 184 174 43 21 chr17 93976729 93976776 -1295875 - L3 LINE CR1 -1651 2838 2791 7 1301 1080 295 67 14 chr17 93977211 93977717 -1294934 - L1M2 LINE L1 -838 5305 4773 7 1301 706 271 82 36 chr17 93977718 93978047 -1294604 + RLTR15 LTR ERVK 1 344 -15 7 162 936 289 104 75 chr17 93978072 93978967 -1293684 + L1MA6 LINE L1 5367 6287 -13 7 1302 22 35 0 0 chr17 93980550 93980579 -1292072 + AT_rich Low_complexity Low_complexity 1 29 0 7 1302 453 356 7 7 chr17 93981528 93981675 -1290976 - B4A SINE B4 -18 274 128 7 1302 248 28 56 0 chr17 93981706 93981742 -1290909 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 7 1302 185 312 58 67 chr17 93983091 93983211 -1289440 + MIR SINE MIR 75 193 -69 7 1302 245 279 131 52 chr17 93983282 93983573 -1289078 - L1ME2 LINE L1 -8 6156 5843 7 1302 355 292 11 22 chr17 93983597 93983688 -1288963 - PB1D10 SINE Alu -2 115 26 7 1302 23 33 0 0 chr17 93983753 93983783 -1288868 + AT_rich Low_complexity Low_complexity 1 30 0 7 1302 664 302 123 9 chr17 93984677 93984904 -1287747 + MER2 DNA MER2_type 92 344 -1 7 1302 216 0 0 0 chr17 93985345 93985369 -1287282 + (T)n Simple_repeat Simple_repeat 1 24 0 7 1302 232 147 0 26 chr17 93985825 93985902 -1286749 + (TA)n Simple_repeat Simple_repeat 2 76 0 7 1302 204 40 0 0 chr17 93985907 93985932 -1286719 + (TG)n Simple_repeat Simple_repeat 2 26 0 7 1302 508 100 25 0 chr17 93985953 93986033 -1286618 + ORR1B2 LTR MaLR 286 367 0 7 1302 582 299 108 39 chr17 93986049 93986567 -1286084 + L1M2c LINE L1 1488 2041 -4748 7 1302 1490 258 39 71 chr17 93986854 93987346 -1285305 + RLTR28B LTR ERVL 6 481 0 7 1302 363 326 63 75 chr17 93987539 93987871 -1284780 - L2a LINE L2 -126 3300 2973 7 1302 508 331 12 30 chr17 93988192 93988357 -1284294 - MTE2b LTR MaLR -217 162 1 7 1302 272 261 67 11 chr17 93988496 93988585 -1284066 - MLT1J LTR MaLR -31 481 388 7 1302 449 328 32 52 chr17 93989190 93989438 -1283213 - MER74B LTR ERVL -323 299 57 7 1302 484 278 69 32 chr17 93989946 93990162 -1282489 - ID_B1 SINE B4 0 224 1 7 1302 318 272 28 56 chr17 93990360 93990504 -1282147 - Lx7 LINE L1 -18 7678 7539 7 1302 294 29 0 0 chr17 93990508 93990543 -1282108 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 1302 1354 266 39 14 chr17 93990549 93990911 -1281740 - Lx7 LINE L1 -297 7399 7029 7 1302 2888 55 5 8 chr17 93991219 93991603 -1281048 + MTA_Mm LTR MaLR 1 383 -13 7 1302 23 33 0 0 chr17 93992369 93992399 -1280252 + AT_rich Low_complexity Low_complexity 1 30 0 7 1302 756 330 59 50 chr17 93992693 93993263 -1279388 + Lx9 LINE L1 6876 7479 -165 7 1302 8126 31 0 1 chr17 93993993 93994952 -1277699 - L1Md_T LINE L1 -1 6581 5624 7 1302 4908 19 0 0 chr17 93994949 93995513 -1277138 + L1Md_T LINE L1 5060 5623 -260 7 1302 480 381 52 0 chr17 93995850 93996044 -1276607 + LTR33B LTR ERVL 159 362 -141 7 1302 802 276 166 47 chr17 93996084 93996360 -1276291 - MER31A LTR ERV1 -10 475 153 7 1302 2537 164 174 10 chr17 93996360 93996953 -1275698 - RMER6C LTR ERVK 0 690 1 7 1302 802 276 166 47 chr17 93996953 93997098 -1275553 - MER31A LTR ERV1 -333 152 4 7 1302 991 252 5 0 chr17 93998138 93998344 -1274307 + B3 SINE B2 10 216 0 7 1302 36 23 0 0 chr17 93998608 93998651 -1274000 + AT_rich Low_complexity Low_complexity 1 43 0 7 1302 1076 84 14 0 chr17 93998786 93998929 -1273722 + B1_Mus1 SINE Alu 4 148 0 7 1302 187 114 45 0 chr17 93999139 93999183 -1273468 + CT-rich Low_complexity Low_complexity 1 46 0 7 1302 1981 202 3 16 chr17 93999632 94000000 -1272651 - MTB_Mm LTR MaLR 0 407 45 7 1302 236 171 0 0 chr17 94000001 94000042 -1272609 - MTC LTR MaLR -380 41 1 1 1302 423 92 0 0 chr17 94000332 94000397 -1272254 + (GA)n Simple_repeat Simple_repeat 2 66 0 2 1302 474 303 113 36 chr17 94002588 94002862 -1269789 + L1_Rod LINE L1 5360 5654 -193 3 1302 4388 161 119 3 chr17 94004325 94005184 -1267467 + RMER17B LTR ERVK 1 958 0 4 1302 21 71 0 0 chr17 94005527 94005569 -1267082 + AT_rich Low_complexity Low_complexity 1 42 0 5 1302 1912 132 3 19 chr17 94005861 94006186 -1266465 + Lx2 LINE L1 6678 6997 0 6 1302 197 236 146 0 chr17 94006639 94006694 -1265957 + L2a LINE L2 3350 3412 -14 7 1302 500 356 25 18 chr17 94007100 94007124 -1265527 - RSINE1 SINE B4 0 165 142 8 1302 600 87 0 0 chr17 94007124 94007216 -1265435 + (TG)n Simple_repeat Simple_repeat 1 92 0 9 1302 500 356 25 18 chr17 94007216 94007354 -1265297 - RSINE1 SINE B4 -24 141 2 8 1302 234 367 0 0 chr17 94007581 94007671 -1264980 + L2 LINE L2 2368 2457 -962 1 1302 394 352 48 62 chr17 94008192 94008573 -1264078 + ORR1E LTR MaLR 1 370 -4 1 1302 227 318 141 60 chr17 94008779 94008963 -1263688 + L3 LINE CR1 4291 4489 0 1 1302 270 299 58 58 chr17 94010367 94010470 -1262181 - PB1D10 SINE Alu -12 105 3 1 1302 316 255 39 48 chr17 94010382 94010485 -1262166 - ID_B1 SINE B4 -54 170 69 1 1302 5198 191 34 16 chr17 94010813 94011866 -1260785 - Lx5 LINE L1 0 7050 5979 1 1302 1414 153 30 182 chr17 94011866 94012048 -1260603 - L1_Mur2 LINE L1 -63 5814 5699 1 1302 1121 76 0 0 chr17 94012048 94012192 -1260459 - B1_Mus2 SINE Alu 0 147 4 1 1302 1414 153 30 182 chr17 94012192 94012409 -1260242 - L1_Mur2 LINE L1 -179 5698 5476 1 1302 7604 168 48 17 chr17 94012422 94014062 -1258589 - L1_Mur2 LINE L1 -2888 2989 1300 1 1302 330 45 0 0 chr17 94014717 94014761 -1257890 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 1 1302 210 211 39 0 chr17 94015206 94015258 -1257393 + CT-rich Low_complexity Low_complexity 3 56 0 1 1302 38 39 0 0 chr17 94015511 94015563 -1257088 + AT_rich Low_complexity Low_complexity 1 52 0 2 1302 310 337 0 0 chr17 94015597 94015683 -1256968 - RSINE1 SINE B4 -38 127 42 2 1302 240 222 37 0 chr17 94016482 94016536 -1256115 - MLT1A1 LTR MaLR -12 396 341 2 1302 273 341 130 12 chr17 94016621 94016790 -1255861 - MLT1A1 LTR MaLR -199 209 21 2 1302 491 248 148 28 chr17 94016800 94017016 -1255635 - MLT1A1-int LTR MaLR 0 1735 1494 2 1302 403 238 0 23 chr17 94017079 94017165 -1255486 + ID_B1 SINE B4 84 167 -57 2 1302 356 299 64 18 chr17 94017165 94017187 -1255464 + PB1D10 SINE Alu 3 115 -2 2 1302 201 312 16 0 chr17 94017187 94017251 -1255400 + (CAA)n Simple_repeat Simple_repeat 1 65 0 2 1302 284 258 169 0 chr17 94017267 94017356 -1255295 - MLT1A1-int LTR MaLR -243 1492 1389 2 1302 248 234 0 0 chr17 94017875 94017922 -1254729 + Lx8 LINE L1 7287 7333 -140 2 1302 18440 93 18 12 chr17 94017959 94020630 -1252021 + L1VL4 LINE L1 146 2800 -759 2 1302 1173 43 0 0 chr17 94020630 94020769 -1251882 + B1_Mm SINE Alu 1 139 -8 2 1302 203 79 0 26 chr17 94020769 94020808 -1251843 + (CAA)n Simple_repeat Simple_repeat 2 39 0 2 1302 18440 83 19 7 chr17 94020808 94021527 -1251124 + L1VL4 LINE L1 2801 3548 -11 2 1302 728 283 54 0 chr17 94021540 94021724 -1250927 + B3 SINE B2 23 216 0 3 1302 275 258 39 55 chr17 94021952 94022079 -1250572 + Lx8 LINE L1 7349 7473 0 2 1302 437 309 13 13 chr17 94022243 94022397 -1250254 + Charlie1 DNA MER1_type 74 227 -2554 3 1302 602 14 0 0 chr17 94022434 94022506 -1250145 - B1_Mur4 SINE Alu -10 140 69 3 1302 24 32 0 0 chr17 94022581 94022612 -1250039 + AT_rich Low_complexity Low_complexity 1 31 0 3 1302 37927 29 0 0 chr17 94022863 94029305 -1243346 - L1Md_T LINE L1 0 6585 71 3 1302 181 317 108 10 chr17 94029312 94029414 -1243237 + MIR SINE MIR 100 211 -51 3 1302 587 51 0 12 chr17 94029620 94029700 -1242951 + (TATG)n Simple_repeat Simple_repeat 4 82 0 3 1302 567 342 166 3 chr17 94031102 94031410 -1241241 - MLT1A0 LTR MaLR 0 365 8 3 1302 325 320 74 19 chr17 94032029 94032225 -1240426 - MIRb SINE MIR -13 263 56 3 1302 4525 2 0 0 chr17 94032520 94033043 -1239608 - L1Md_A LINE L1 0 6582 6084 3 1302 201 304 101 0 chr17 94033222 94033301 -1239350 + L2a LINE L2 3298 3384 -42 4 1302 570 298 131 31 chr17 94036982 94037426 -1235225 + Arthur1 DNA Tip100 3396 3883 -64 4 1302 253 284 27 0 chr17 94038944 94039018 -1233633 + B1_Mur2 SINE Alu 73 148 -1 4 1302 298 349 60 46 chr17 94039270 94039561 -1233090 - L2a LINE L2 -285 3141 2848 4 1302 271 323 182 52 chr17 94039960 94040404 -1232247 - L2a LINE L2 -740 2679 2178 4 1302 520 249 117 17 chr17 94041185 94041365 -1231286 + RMER5 LTR ERV1 1 198 -336 4 1302 812 121 63 7 chr17 94041374 94041516 -1231135 + Lx2 LINE L1 1491 1640 -4237 4 1302 5285 144 23 35 chr17 94041510 94042356 -1230295 + Lx2 LINE L1 2679 3527 -2350 4 1302 688 93 317 14 chr17 94042356 94042498 -1230153 - B2_Mm2 SINE B2 -10 185 1 4 1302 5285 144 23 35 chr17 94042498 94042670 -1229981 + Lx2 LINE L1 3528 3684 -2193 4 1302 1141 268 112 64 chr17 94042932 94043371 -1229280 - RMER13A LTR ERVK -400 460 1 4 1302 9409 181 34 43 chr17 94043371 94045045 -1227606 + Lx2 LINE L1 3683 5352 -525 4 1302 582 15 0 0 chr17 94045045 94045112 -1227539 + (CCCTAA)n Simple_repeat Simple_repeat 2 68 0 4 1302 9409 126 17 11 chr17 94045112 94046751 -1225900 + Lx2 LINE L1 5353 6996 -1 4 1302 3425 210 82 17 chr17 94046809 94047617 -1225034 + Lx5 LINE L1 5737 6596 -454 4 1302 2766 191 35 0 chr17 94047611 94048146 -1224505 + RMER1A Other Other 477 1030 0 5 1302 234 343 209 0 chr17 94048305 94048410 -1224241 + B4A SINE B4 90 216 -76 5 1302 833 89 0 0 chr17 94048410 94048522 -1224129 - L1_Mus1 LINE L1 -403 6164 6053 5 1302 2627 66 0 14 chr17 94048527 94048881 -1223770 + L1_Mus1 LINE L1 6218 6566 -1 5 1302 24663 149 21 11 chr17 94048974 94054715 -1217936 - L1_Mus4 LINE L1 -7 6629 827 5 1302 1068 36 57 0 chr17 94054746 94054886 -1217765 + B1_Mus1 SINE Alu 1 148 0 5 1302 298 17 0 78 chr17 94054889 94054953 -1217698 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 5 1302 352 361 16 20 chr17 94054961 94055207 -1217444 - L1_Mus4 LINE L1 -5872 785 541 5 1302 266 276 0 26 chr17 94055253 94055331 -1217320 + (CA)n Simple_repeat Simple_repeat 2 77 0 5 1302 236 77 26 0 chr17 94056245 94056284 -1216367 + (CAAAA)n Simple_repeat Simple_repeat 4 43 0 5 1302 1397 180 92 67 chr17 94056423 94056750 -1215901 - ORR1C1 LTR MaLR -28 350 16 5 1302 22 35 0 0 chr17 94056972 94057001 -1215650 + AT_rich Low_complexity Low_complexity 1 29 0 5 1302 1352 278 49 37 chr17 94057248 94057738 -1214913 + Lx9 LINE L1 6688 7183 -461 6 1302 272 347 105 0 chr17 94057815 94057939 -1214712 + Lx8 LINE L1 7196 7332 -141 6 1302 22 56 0 0 chr17 94057949 94057985 -1214666 + AT_rich Low_complexity Low_complexity 1 36 0 6 1302 838 338 56 39 chr17 94058735 94059218 -1213433 + Lx8 LINE L1 6722 7212 -261 6 1302 1996 221 66 79 chr17 94059375 94059994 -1212657 + RMER19C LTR ERVK 1 611 0 6 1302 723 319 29 4 chr17 94060146 94060423 -1212228 + Lx9 LINE L1 7072 7355 -289 6 1302 496 270 84 31 chr17 94060515 94060802 -1211849 - L1MA9 LINE L1 -5 6307 6006 6 1302 21 0 0 0 chr17 94061019 94061040 -1211611 + AT_rich Low_complexity Low_complexity 1 21 0 6 1302 1054 291 35 18 chr17 94061042 94061437 -1211214 + Lx8 LINE L1 6480 6881 -592 6 1302 192 77 0 0 chr17 94061681 94061707 -1210944 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 1302 341 385 36 29 chr17 94061726 94061865 -1210786 - RSINE1 SINE B4 -22 143 4 7 1302 310 341 0 0 chr17 94063699 94063787 -1208864 - RMER15 LTR ERVL -117 458 371 7 1302 970 110 7 0 chr17 94064214 94064360 -1208291 + B1_Mus1 SINE Alu 2 148 0 7 1302 195 42 0 0 chr17 94064361 94064385 -1208266 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 1302 22 70 0 0 chr17 94064392 94064435 -1208216 + AT_rich Low_complexity Low_complexity 1 43 0 7 1302 189 380 26 53 chr17 94065600 94065714 -1206937 + MIRm SINE MIR 166 276 0 7 1302 527 333 124 33 chr17 94066350 94066657 -1205994 + MLT1A0 LTR MaLR 1 335 -30 7 1302 561 120 0 0 chr17 94067723 94067815 -1204836 + (GA)n Simple_repeat Simple_repeat 1 92 0 7 1302 1065 63 34 11 chr17 94068234 94068410 -1204241 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 1302 6140 140 15 11 chr17 94068474 94070089 -1202562 - L1VL4 LINE L1 -1620 2197 573 7 1302 578 261 123 20 chr17 94070903 94071106 -1201545 - Lx8 LINE L1 -150 7323 7100 8 1302 260 273 115 13 chr17 94071199 94071277 -1201374 + RSINE1 SINE B4 8 93 -72 8 1302 24 32 0 0 chr17 94071344 94071375 -1201276 + AT_rich Low_complexity Low_complexity 1 31 0 8 1302 525 166 7 14 chr17 94072116 94072263 -1200388 + (TA)n Simple_repeat Simple_repeat 2 147 0 8 1302 289 255 153 0 chr17 94072366 94072464 -1200187 + MER21B LTR ERV1 627 739 -124 8 1302 207 0 0 0 chr17 94073419 94073442 -1199209 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 1302 4957 88 10 3 chr17 94073740 94074423 -1198228 + L1_Mus3 LINE L1 5950 6637 -1 8 1302 183 42 0 0 chr17 94074423 94074447 -1198204 + (TA)n Simple_repeat Simple_repeat 2 25 0 8 1302 610 291 25 6 chr17 94074932 94075091 -1197560 + MTE2b LTR MaLR 9 170 -209 8 1302 1704 234 58 5 chr17 94075095 94075490 -1197161 + MTD LTR MaLR 1 416 -3 8 1302 589 254 151 27 chr17 94075491 94075677 -1196974 + MTE2b LTR MaLR 169 377 -2 8 1302 25 90 0 0 chr17 94076284 94076351 -1196300 + AT_rich Low_complexity Low_complexity 1 67 0 9 1302 244 255 43 14 chr17 94076428 94076514 -1196137 + Lx7 LINE L1 5472 5572 -740 9 1302 6419 228 59 29 chr17 94076505 94076631 -1196020 - Lx7 LINE L1 -15 7681 7549 9 1302 306 0 0 0 chr17 94076631 94076665 -1195986 + (TAA)n Simple_repeat Simple_repeat 3 36 0 9 1302 6419 228 59 29 chr17 94076665 94078135 -1194516 - Lx7 LINE L1 -148 7548 6038 9 1302 369 240 138 31 chr17 94078210 94078477 -1194174 + Lx7 LINE L1 5633 5927 -1546 9 1302 429 20 0 0 chr17 94078488 94078538 -1194113 + (TG)n Simple_repeat Simple_repeat 1 50 0 9 1302 403 175 29 49 chr17 94078729 94078831 -1193820 - Lx9 LINE L1 -11 7633 7534 9 1302 243 0 0 0 chr17 94078838 94078865 -1193786 + (TA)n Simple_repeat Simple_repeat 2 28 0 9 1302 4984 9 5 0 chr17 94078939 94079500 -1193151 + L1Md_T LINE L1 6007 6570 -12 9 1302 21 0 0 0 chr17 94079516 94079537 -1193114 + AT_rich Low_complexity Low_complexity 1 21 0 9 1302 804 11 0 0 chr17 94080373 94080466 -1192185 + (CA)n Simple_repeat Simple_repeat 2 94 0 9 1302 1734 202 44 52 chr17 94080495 94080822 -1191829 - Lx9 LINE L1 -167 7477 7160 9 1302 2880 63 43 2 chr17 94080822 94081220 -1191431 - L1_Mus3 LINE L1 -8 6630 6217 1 1302 1734 202 44 52 chr17 94081220 94081299 -1191352 - Lx9 LINE L1 -485 7159 7074 9 1302 830 211 33 6 chr17 94081297 94081478 -1191173 + Lx9 LINE L1 6907 7092 -552 9 1302 185 0 40 0 chr17 94081790 94081815 -1190836 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 1302 1175 48 7 0 chr17 94081821 94081966 -1190685 - B1_Mus1 SINE Alu -1 147 2 1 1302 1174 262 75 6 chr17 94082161 94082510 -1190141 - MTE2b LTR MaLR -2 377 5 1 1302 282 169 0 0 chr17 94083719 94083784 -1188867 + GA-rich Low_complexity Low_complexity 2 66 0 1 1302 238 246 0 0 chr17 94083789 94083850 -1188801 + (CAGA)n Simple_repeat Simple_repeat 2 62 0 1 1302 324 0 0 0 chr17 94083896 94083932 -1188719 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 1302 480 18 0 0 chr17 94084062 94084119 -1188532 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 1302 182 105 26 0 chr17 94084824 94084862 -1187789 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1302 6176 14 0 0 chr17 94085476 94086174 -1186477 - L1Md_A LINE L1 0 6582 5885 1 1302 21 36 0 0 chr17 94086244 94086272 -1186379 + AT_rich Low_complexity Low_complexity 1 28 0 1 1302 315 122 0 0 chr17 94086974 94087023 -1185628 + (TCTCCC)n Simple_repeat Simple_repeat 1 49 0 1 1302 225 83 0 0 chr17 94087063 94087099 -1185552 + (TCTG)n Simple_repeat Simple_repeat 3 38 0 1 1302 719 285 42 142 chr17 94087968 94088426 -1184225 + RMER10A LTR ERVL 12 423 -19 1 1302 21 36 0 0 chr17 94089533 94089561 -1183090 + AT_rich Low_complexity Low_complexity 1 28 0 1 1302 282 163 60 162 chr17 94089651 94089664 -1182987 - BC1_Mm scRNA scRNA -39 113 103 1 1302 1152 62 7 0 chr17 94089664 94089809 -1182842 - B1_Mm SINE Alu 0 147 2 1 1302 282 163 60 162 chr17 94089809 94089912 -1182739 - BC1_Mm scRNA scRNA -50 102 9 1 1302 569 270 105 11 chr17 94090041 94090307 -1182344 - L1MA6 LINE L1 -116 6184 5894 1 1302 375 297 138 46 chr17 94090312 94090637 -1182014 + L1M2 LINE L1 4729 5083 -1060 1 1302 8133 123 78 27 chr17 94090658 94091278 -1181373 - Lx3_Mus LINE L1 -3 7006 6406 1 1302 198 0 0 0 chr17 94091278 94091300 -1181351 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1 1302 1090 67 0 0 chr17 94091300 94091435 -1181216 - B1_Mm SINE Alu -10 137 3 1 1302 26206 104 28 13 chr17 94091435 94094229 -1178422 - Lx3_Mus LINE L1 -604 6405 3488 1 1302 236 30 0 29 chr17 94094229 94094263 -1178388 + (TTG)n Simple_repeat Simple_repeat 1 33 0 1 1302 286 42 20 20 chr17 94094271 94094320 -1178331 + (TTTG)n Simple_repeat Simple_repeat 1 49 0 1 1302 26206 101 19 10 chr17 94094320 94094499 -1178152 - Lx3_Mus LINE L1 -2407 3479 3317 1 1302 1037 83 14 0 chr17 94094499 94094644 -1178007 - B1_Mus1 SINE Alu 0 148 2 1 1302 26206 101 19 10 chr17 94094644 94096102 -1176549 - Lx3_Mus LINE L1 -2570 3316 1844 1 1302 721 263 3 103 chr17 94096107 94096408 -1176243 - Lx3_Mus LINE L1 -6667 317 47 1 1302 516 272 0 7 chr17 94096625 94096762 -1175889 + Tigger1 DNA MER2_type 1803 1938 -480 1 1302 556 259 136 5 chr17 94096809 94097007 -1175644 + Tigger1 DNA MER2_type 2083 2306 -112 1 1302 25 65 0 0 chr17 94097291 94097337 -1175314 + AT_rich Low_complexity Low_complexity 1 46 0 1 1302 22 35 0 0 chr17 94097416 94097445 -1175206 + AT_rich Low_complexity Low_complexity 1 29 0 1 1302 297 0 0 0 chr17 94098382 94098415 -1174236 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 1302 300 321 0 28 chr17 94099268 94099409 -1173242 + (TATG)n Simple_repeat Simple_repeat 2 138 0 1 1302 305 283 64 79 chr17 94101246 94101449 -1171202 + L1M3e LINE L1 76 275 -6755 1 1302 369 213 0 77 chr17 94101509 94101600 -1171051 + L1M2 LINE L1 5479 5562 -627 1 1302 450 0 0 0 chr17 94102205 94102255 -1170396 + (TC)n Simple_repeat Simple_repeat 2 51 0 1 1302 357 24 0 0 chr17 94102255 94102296 -1170355 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1302 4599 145 79 5 chr17 94102368 94103384 -1169267 - Lx3C LINE L1 -850 6126 5055 1 1302 2102 153 47 0 chr17 94103377 94103763 -1168888 - MusHAL1 LINE L1 -617 2095 1692 1 1302 1309 145 123 11 chr17 94103775 94103996 -1168655 - Lx3C LINE L1 -3581 2305 2081 1 1302 429 20 0 0 chr17 94103996 94104046 -1168605 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1302 1309 145 123 11 chr17 94104046 94104109 -1168542 - Lx3C LINE L1 -3806 2080 1990 1 1302 361 167 5 67 chr17 94104104 94104202 -1168449 + Lx5 LINE L1 6447 6554 -443 1 1302 258 341 0 0 chr17 94105654 94105736 -1166915 + ID4_ SINE ID 2 83 0 1 1302 1781 320 157 28 chr17 94105932 94106745 -1165906 - MTE2b-int LTR MaLR -124 1456 539 1 1302 391 356 125 42 chr17 94106754 94107091 -1165560 - MTE2b-int LTR MaLR -1004 366 2 1 1302 997 304 46 84 chr17 94107095 94107487 -1165164 - MTE2b LTR MaLR -2 377 1 1 1302 393 408 74 34 chr17 94108878 94109147 -1163504 + B4A SINE B4 5 284 -8 1 1303 3895 40 2 0 chr17 94110090 94110559 -1162092 - L1Md_T LINE L1 0 6582 6113 1 1303 423 0 0 0 chr17 94110770 94110817 -1161834 + (TTCC)n Simple_repeat Simple_repeat 3 49 0 1 1303 293 299 0 72 chr17 94111134 94111217 -1161434 + ID4_ SINE ID 7 83 0 1 1303 225 132 0 0 chr17 94111217 94111255 -1161396 + (A)n Simple_repeat Simple_repeat 1 38 0 1 1303 2686 160 36 77 chr17 94111603 94112164 -1160487 + Lx2B LINE L1 6463 7000 0 1 1303 709 158 0 32 chr17 94112259 94112383 -1160268 - Lx LINE L1 -200 6454 6335 1 1303 2033 227 79 14 chr17 94112695 94113178 -1159473 - Lx9 LINE L1 -811 6833 6320 1 1303 438 250 45 55 chr17 94113207 94113427 -1159224 - Lx9 LINE L1 -1398 6246 6029 1 1303 213 329 33 89 chr17 94113482 94113572 -1159079 - B1F1 SINE Alu -47 102 18 1 1303 434 309 148 19 chr17 94113644 94114407 -1158244 + L1ME1 LINE L1 5037 5896 -283 1 1303 1941 143 89 8 chr17 94115667 94115790 -1156861 - Lx2A1 LINE L1 0 7008 6883 1 1303 3060 69 18 0 chr17 94115790 94116179 -1156472 - MTA_Mm LTR MaLR 0 396 1 1 1303 1941 143 89 8 chr17 94116179 94116415 -1156236 - Lx2A1 LINE L1 -126 6882 6620 1 1303 565 327 27 36 chr17 94116465 94116684 -1155967 - Lx8 LINE L1 -121 7352 7136 1 1303 291 128 75 85 chr17 94116682 94116776 -1155875 - L1M3 LINE L1 -539 5629 5537 1 1303 856 156 144 75 chr17 94118542 94118666 -1153985 - URR1A DNA MER1_type -11 215 102 1 1303 3002 86 5 0 chr17 94118666 94119071 -1153580 - L1_Mus1 LINE L1 -1 6566 6160 1 1303 856 156 144 75 chr17 94119071 94119147 -1153504 - URR1A DNA MER1_type -125 101 1 1 1303 305 207 48 40 chr17 94120526 94120652 -1151999 - RLTR42-int LTR ERVK -624 4898 4772 1 1303 1069 172 29 0 chr17 94120653 94120857 -1151794 + Lx4A LINE L1 6849 7058 0 1 1303 22 0 0 0 chr17 94120998 94121020 -1151631 + AT_rich Low_complexity Low_complexity 1 22 0 1 1303 275 115 33 0 chr17 94122103 94122164 -1150487 + (CAGA)n Simple_repeat Simple_repeat 2 64 0 1 1303 304 28 0 0 chr17 94122279 94122315 -1150336 - U2 snRNA snRNA -152 36 1 1 1303 272 324 26 78 chr17 94123213 94123367 -1149284 - Lx8 LINE L1 -118 7355 7210 1 1303 953 63 118 0 chr17 94123406 94123533 -1149118 + B1_Mus1 SINE Alu 2 143 -5 1 1303 242 262 16 47 chr17 94123568 94123632 -1149019 - Lx8 LINE L1 -311 7162 7101 1 1303 1485 258 53 28 chr17 94123643 94124038 -1148613 - MTD LTR MaLR -14 405 1 1 1303 1374 231 36 18 chr17 94124040 94124370 -1148281 - Lx8 LINE L1 -368 7105 6770 1 1303 22 0 0 0 chr17 94124976 94124998 -1147653 + AT_rich Low_complexity Low_complexity 1 22 0 1 1303 3893 122 14 2 chr17 94125112 94125704 -1146947 - L1_Mus4 LINE L1 -7 6629 6031 1 1303 3749 164 3 7 chr17 94125704 94126505 -1146146 - L1VL4 LINE L1 -2469 1090 293 1 1303 210 397 0 0 chr17 94126801 94126879 -1145772 - ID SINE ID -144 80 3 1 1303 441 284 37 0 chr17 94127161 94127270 -1145381 + B1F SINE Alu 22 134 -15 1 1303 7694 111 8 2 chr17 94127459 94129311 -1143340 - L1_Mus3 LINE L1 -7 6631 4767 1 1303 188 256 89 13 chr17 94129337 94129416 -1143235 + L3 LINE CR1 2443 2527 -1962 1 1303 800 255 38 9 chr17 94129561 94129771 -1142880 - B3 SINE B2 0 216 1 1 1303 429 328 52 10 chr17 94130529 94130723 -1141928 + ERVL-int LTR ERVL 5522 5723 -34 1 1303 660 318 115 20 chr17 94130763 94131068 -1141583 + MLT2C2 LTR ERVL 3 336 -128 1 1303 765 254 318 5 chr17 94131510 94131894 -1140757 - Tigger1 DNA MER2_type -112 2306 1803 1 1303 3507 123 29 0 chr17 94132030 94133089 -1139562 + L1_Mur1 LINE L1 676 1808 -4078 1 1303 6334 78 12 17 chr17 94133090 94134017 -1138634 + L1_Mur1 LINE L1 3683 4604 -1282 1 1303 3265 215 41 65 chr17 94133978 94134855 -1137796 - Lx9 LINE L1 -66 7578 6723 1 1303 1077 214 94 13 chr17 94135002 94135278 -1137373 - L1MA8 LINE L1 -436 5855 5512 1 1303 354 23 0 0 chr17 94135278 94135321 -1137330 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1303 339 311 96 45 chr17 94135321 94135368 -1137283 - L1MA8 LINE L1 -721 5570 5527 1 1303 22 0 0 0 chr17 94135823 94135845 -1136806 + AT_rich Low_complexity Low_complexity 1 22 0 1 1303 1114 200 151 5 chr17 94135972 94136277 -1136374 + ORR1C2 LTR MaLR 3 384 0 1 1303 321 167 0 0 chr17 94136577 94136655 -1135996 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 1303 239 208 38 0 chr17 94137347 94137400 -1135251 + B3 SINE B2 152 206 -10 1 1303 265 150 0 0 chr17 94137426 94137466 -1135185 - Lx6 LINE L1 -771 6689 6650 1 1303 1317 225 95 88 chr17 94137473 94137916 -1134735 - RMER4A LTR ERVK -5 461 16 1 1303 457 240 10 30 chr17 94137923 94138022 -1134629 - Lx7 LINE L1 -1029 6667 6571 1 1303 470 244 14 88 chr17 94138033 94138181 -1134470 + B4A SINE B4 108 244 -48 1 1303 2022 106 27 3 chr17 94138802 94139095 -1133556 - L1_Mus3 LINE L1 -275 6363 6064 1 1303 314 95 32 0 chr17 94139095 94139158 -1133493 + Lx LINE L1 6589 6653 -1 1 1303 267 244 167 0 chr17 94140949 94141039 -1131612 + MER58A DNA MER1_type 47 151 -73 1 1303 26 30 0 0 chr17 94141270 94141303 -1131348 + AT_rich Low_complexity Low_complexity 1 33 0 1 1303 310 287 72 22 chr17 94141649 94141788 -1130863 - Lx5 LINE L1 0 7050 6905 1 1303 2696 225 42 23 chr17 94141782 94142400 -1130251 - Lx5 LINE L1 -63 6987 6358 1 1303 7900 142 49 3 chr17 94142405 94143825 -1128826 + L1_Mur2 LINE L1 3141 4626 -1251 1 1303 2816 83 39 0 chr17 94144430 94144815 -1127836 - MTB LTR MaLR 0 400 1 1 1303 2701 174 12 76 chr17 94145907 94146756 -1125895 + L1VL4 LINE L1 345 1125 -2434 1 1303 29071 61 4 0 chr17 94146724 94150491 -1122160 + L1Md_F2 LINE L1 1805 5586 -297 1 1303 7993 49 5 2 chr17 94150491 94151484 -1121167 + L1Md_F2 LINE L1 5587 6582 0 1 1303 189 94 0 0 chr17 94151520 94151552 -1121099 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1 1303 12539 205 106 50 chr17 94151554 94153012 -1119639 + L1_Mus3 LINE L1 1442 2924 -2959 1 1303 524 57 0 0 chr17 94153012 94153082 -1119569 + B1_Mus2 SINE Alu 75 144 -3 1 1303 237 65 0 0 chr17 94153082 94153113 -1119538 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2 1303 12539 205 106 50 chr17 94153113 94155259 -1117392 + L1_Mus3 LINE L1 2925 5359 -524 1 1303 363 44 0 0 chr17 94155259 94155304 -1117347 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 1303 12539 164 60 21 chr17 94155304 94156347 -1116304 + L1_Mus3 LINE L1 5360 6487 -513 1 1303 7970 52 2 0 chr17 94156347 94157341 -1115310 + L1Md_F2 LINE L1 5587 6582 0 2 1303 3649 247 123 37 chr17 94157341 94157831 -1114820 + L1_Mus3 LINE L1 6488 6999 -1 1 1303 803 330 118 41 chr17 94158082 94158547 -1114104 - MLT1E LTR MaLR -53 600 100 2 1303 557 14 0 14 chr17 94160491 94160562 -1112089 - B1_Mm SINE Alu -1 146 77 2 1303 1212 106 0 0 chr17 94163194 94163373 -1109278 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2 1303 1036 96 0 0 chr17 94163376 94163511 -1109140 - B1_Mus1 SINE Alu -12 136 2 2 1303 26 88 0 0 chr17 94163552 94163620 -1109031 + AT_rich Low_complexity Low_complexity 1 68 0 2 1303 5555 101 7 19 chr17 94163631 94164398 -1108253 - L1_Mus3 LINE L1 -3 6635 5870 2 1303 243 0 0 0 chr17 94164398 94164425 -1108226 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 2 1303 5555 101 7 19 chr17 94164425 94164479 -1108172 - L1_Mus3 LINE L1 -769 5869 5824 2 1303 1539 267 73 6 chr17 94165699 94166177 -1106474 + Lx7 LINE L1 6794 7303 -393 2 1303 1647 188 50 35 chr17 94167289 94167630 -1105021 - Lx6 LINE L1 -538 6922 6577 2 1303 1449 224 31 7 chr17 94167628 94167920 -1104731 + Lx6 LINE L1 6950 7248 -212 2 1303 189 0 0 0 chr17 94167922 94167943 -1104708 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2 1303 394 263 0 0 chr17 94167949 94168067 -1104584 + Lx6 LINE L1 7332 7449 -11 2 1303 1222 219 10 19 chr17 94168103 94168415 -1104236 - Lx7 LINE L1 -16 7680 7372 2 1303 225 236 0 0 chr17 94168420 94168475 -1104176 - Lx7 LINE L1 -581 7115 7061 2 1303 285 29 0 0 chr17 94169210 94169244 -1103407 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 1303 21 36 0 0 chr17 94169308 94169336 -1103315 + AT_rich Low_complexity Low_complexity 1 28 0 2 1303 593 271 18 38 chr17 94169688 94169871 -1102780 - B4 SINE B4 -2 290 106 2 1303 450 0 0 0 chr17 94171466 94171516 -1101135 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 1303 350 187 11 0 chr17 94171618 94171709 -1100942 + (CA)n Simple_repeat Simple_repeat 1 92 0 2 1303 242 258 58 58 chr17 94172833 94172936 -1099715 + LTR37B LTR ERV1 154 256 -212 2 1303 1646 201 30 36 chr17 94173584 94173946 -1098705 - ORR1D1 LTR MaLR 0 374 15 2 1303 25 51 0 0 chr17 94174918 94174957 -1097694 + AT_rich Low_complexity Low_complexity 1 39 0 2 1303 210 408 26 0 chr17 94175118 94175194 -1097457 - ID4_ SINE ID -4 79 2 2 1303 429 311 152 64 chr17 94176019 94176702 -1095949 + L1MB4 LINE L1 68 810 -5797 2 1303 343 273 108 17 chr17 94176926 94177157 -1095494 + L1MB4 LINE L1 1245 1496 -5149 2 1303 3830 246 58 33 chr17 94177172 94178234 -1094417 + Lx7 LINE L1 6270 7358 -338 2 1303 189 174 40 20 chr17 94178249 94178349 -1094302 + (TA)n Simple_repeat Simple_repeat 1 102 0 2 1303 243 0 0 0 chr17 94178354 94178381 -1094270 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1303 1232 208 22 60 chr17 94178396 94178749 -1093902 + Lx7 LINE L1 7107 7646 -50 2 1303 269 293 100 62 chr17 94178741 94179061 -1093590 + L1MA5 LINE L1 5938 6269 -31 2 1303 258 236 0 0 chr17 94179081 94179136 -1093515 + L1MA5A LINE L1 6181 6235 -62 2 1303 201 39 0 0 chr17 94179446 94179472 -1093179 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 1303 27 29 0 0 chr17 94179472 94179506 -1093145 + AT_rich Low_complexity Low_complexity 1 34 0 2 1303 358 363 29 29 chr17 94179896 94180035 -1092616 + RSINE1 SINE B4 3 141 -24 2 1303 1272 63 0 0 chr17 94180035 94180242 -1092409 + (TC)n Simple_repeat Simple_repeat 1 207 0 2 1303 381 22 0 0 chr17 94180242 94180287 -1092364 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1303 216 0 0 0 chr17 94180706 94180730 -1091921 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 1303 23 0 0 0 chr17 94180840 94180863 -1091788 + AT_rich Low_complexity Low_complexity 1 23 0 2 1303 257 220 0 0 chr17 94183798 94183848 -1088803 + ID4 SINE ID 2 51 -32 2 1303 183 189 81 0 chr17 94184054 94184091 -1088560 + L3 LINE CR1 110 149 -4340 2 1303 8509 26 0 0 chr17 94184272 94185411 -1087240 - L1Md_A LINE L1 0 6582 5444 2 1303 306 243 123 56 chr17 94185413 94185592 -1087059 + MER33 DNA MER1_type 129 319 -5 2 1303 768 200 11 29 chr17 94185639 94185814 -1086837 + L1_Mur3 LINE L1 3777 3951 -1896 2 1303 1116 133 0 0 chr17 94185921 94186101 -1086550 + (TC)n Simple_repeat Simple_repeat 1 180 0 2 1303 210 37 0 0 chr17 94186214 94186241 -1086410 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1303 944 95 22 0 chr17 94186354 94186491 -1086160 + B1_Mus1 SINE Alu 9 148 0 2 1303 251 229 14 0 chr17 94186550 94186620 -1086031 + L1M2 LINE L1 3982 4052 -2091 2 1303 414 269 137 30 chr17 94186615 94187037 -1085614 - L1_Mur3 LINE L1 -472 5702 5231 2 1303 403 224 186 12 chr17 94187235 94187263 -1085388 - L1_Mur3 LINE L1 -1089 4791 4764 2 1303 654 49 0 0 chr17 94187263 94187345 -1085306 + (TA)n Simple_repeat Simple_repeat 1 82 0 2 1303 403 224 186 12 chr17 94187345 94187488 -1085163 - L1_Mur3 LINE L1 -1117 4763 4592 2 1303 586 260 50 20 chr17 94187492 94187762 -1084889 + Lx7 LINE L1 5653 5961 -1683 2 1303 21 36 0 0 chr17 94187920 94187948 -1084703 + AT_rich Low_complexity Low_complexity 1 28 0 2 1303 783 175 29 0 chr17 94188130 94188267 -1084384 + RMER10B LTR ERVL 1 141 -257 2 1303 1158 143 30 55 chr17 94188267 94188455 -1084196 - LTRIS5 LTR ERV1 0 447 263 2 1303 3000 29 0 0 chr17 94188455 94188801 -1083850 + ORR1A0 LTR MaLR 1 346 0 2 1303 1158 143 30 55 chr17 94188801 94188849 -1083802 - LTRIS5 LTR ERV1 -185 262 217 2 1303 404 104 60 0 chr17 94188885 94188952 -1083699 - LTRIS5 LTR ERV1 -376 71 1 2 1303 1311 177 0 55 chr17 94188952 94189227 -1083424 + RMER10B LTR ERVL 139 398 0 2 1303 3240 299 88 22 chr17 94189238 94190436 -1082215 + Lx8 LINE L1 6198 7473 0 2 1303 21 0 0 0 chr17 94190484 94190505 -1082146 + AT_rich Low_complexity Low_complexity 1 21 0 2 1303 2133 111 11 46 chr17 94190824 94191173 -1081478 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1303 5860 62 13 18 chr17 94191175 94191950 -1080701 - IAPEz-int LTR ERVK -2 6479 5709 2 1303 3109 30 0 8 chr17 94191924 94192298 -1080353 - IAPEz-int LTR ERVK -2110 4371 4001 2 1303 19320 87 26 20 chr17 94192296 94195046 -1077605 - IAPEz-int LTR ERVK -3707 2774 8 2 1303 2133 111 11 46 chr17 94195046 94195395 -1077256 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1303 234 280 94 94 chr17 94196370 94196508 -1076143 - MLT1A0 LTR MaLR -100 265 128 2 1303 255 286 39 39 chr17 94196600 94196702 -1075949 - MLT-int LTR MaLR 0 1735 1634 2 1303 447 306 96 11 chr17 94196716 94196987 -1075664 + L1_Mur3 LINE L1 3637 3930 -1950 2 1303 243 0 0 0 chr17 94197058 94197085 -1075566 + (TC)n Simple_repeat Simple_repeat 1 27 0 2 1303 23 33 0 0 chr17 94197106 94197136 -1075515 + AT_rich Low_complexity Low_complexity 1 30 0 2 1303 21 57 0 0 chr17 94198456 94198491 -1074160 + AT_rich Low_complexity Low_complexity 1 35 0 2 1303 687 54 0 0 chr17 94198991 94199083 -1073568 + (CA)n Simple_repeat Simple_repeat 1 92 0 2 1303 243 0 0 0 chr17 94199083 94199110 -1073541 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1303 30 77 0 0 chr17 94199167 94199232 -1073419 + AT_rich Low_complexity Low_complexity 1 65 0 2 1303 22 0 0 0 chr17 94199325 94199347 -1073304 + AT_rich Low_complexity Low_complexity 1 22 0 2 1303 487 296 0 16 chr17 94199392 94199519 -1073132 - MTEa LTR MaLR -254 125 1 2 1303 1523 289 111 16 chr17 94199559 94200066 -1072585 - MTE-int LTR MaLR -679 901 347 2 1303 399 173 0 0 chr17 94200132 94200242 -1072409 + GA-rich Low_complexity Low_complexity 1 110 0 2 1303 229 290 39 29 chr17 94200274 94200411 -1072240 + L1MC LINE L1 5163 5300 -846 2 1303 249 286 134 60 chr17 94200429 94200563 -1072088 + RSINE1 SINE B4 3 146 -19 2 1303 180 0 0 0 chr17 94201491 94201511 -1071140 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2 1303 327 316 25 10 chr17 94201589 94201787 -1070864 + L1M3 LINE L1 4460 4660 -1480 2 1303 1782 104 3 49 chr17 94202021 94202305 -1070346 - MTB LTR MaLR -129 271 1 2 1303 24 53 0 0 chr17 94202353 94202391 -1070260 + AT_rich Low_complexity Low_complexity 1 38 0 2 1303 676 201 50 0 chr17 94202462 94202601 -1070050 - B1_Mur4 SINE Alu -1 149 4 2 1303 182 171 0 24 chr17 94204116 94204158 -1068493 + CT-rich Low_complexity Low_complexity 2 42 0 2 1303 547 123 29 51 chr17 94204159 94204296 -1068355 - RMER17C LTR ERVK -135 275 142 2 1303 180 344 78 31 chr17 94204469 94204598 -1068053 + L2c LINE L2 3183 3317 -70 2 1303 399 319 25 16 chr17 94205747 94205868 -1066783 + RSINE1 SINE B4 5 126 -39 2 1303 269 219 62 0 chr17 94206143 94206207 -1066444 + RMER5 LTR ERV1 34 101 -433 2 1303 870 318 128 34 chr17 94206213 94206659 -1065992 + RMER5 LTR ERV1 47 534 0 2 1303 1573 122 4 4 chr17 94206754 94207000 -1065651 + Lx2 LINE L1 6745 6990 -7 2 1303 420 20 0 0 chr17 94207746 94207795 -1064856 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 1303 257 231 115 0 chr17 94208771 94208849 -1063802 + MER31B LTR ERV1 1 87 -379 2 1303 578 330 67 40 chr17 94208952 94209252 -1063399 + MER67A LTR ERV1 236 543 0 2 1303 262 340 54 48 chr17 94209434 94209601 -1063050 + MIRb SINE MIR 87 254 -14 2 1303 322 325 39 7 chr17 94209727 94209882 -1062769 - MLT1D LTR MaLR -5 500 341 2 1303 739 143 0 0 chr17 94209948 94210060 -1062591 - L1_Mus3 LINE L1 -411 6227 6116 2 1303 2470 118 38 8 chr17 94210060 94210454 -1062197 + L1_Mus3 LINE L1 6218 6623 -15 2 1303 544 156 9 9 chr17 94210602 94210712 -1061939 + CT-rich Low_complexity Low_complexity 3 112 0 2 1303 1994 165 39 14 chr17 94210714 94211077 -1061574 - Lx4A LINE L1 -1 7057 6686 2 1303 328 316 92 0 chr17 94213629 94213777 -1058874 - L2a LINE L2 -4 3422 3205 2 1303 2609 44 0 0 chr17 94213875 94214194 -1058457 - L1Md_A LINE L1 0 6582 6264 2 1303 342 67 0 0 chr17 94214235 94214280 -1058371 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1303 297 0 0 0 chr17 94214351 94214384 -1058267 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 1303 207 369 61 22 chr17 94215221 94215401 -1057250 - L2 LINE L2 -2575 844 658 2 1303 187 351 35 17 chr17 94215553 94215669 -1056982 - L2 LINE L2 -2942 477 360 2 1303 23 0 0 0 chr17 94215898 94215921 -1056730 + AT_rich Low_complexity Low_complexity 1 23 0 2 1303 1707 133 132 24 chr17 94216889 94216912 -1055739 - RLTR9A LTR ERVK 0 368 346 2 1303 1854 125 9 53 chr17 94216912 94217249 -1055402 - RLTRETN_Mm LTR ERVK 0 322 1 2 1303 1707 133 132 24 chr17 94217249 94217557 -1055094 - RLTR9A LTR ERVK -23 345 2 2 1303 11912 236 39 23 chr17 94218050 94221608 -1051043 - ETnERV2-int LTR ERVK -1195 6211 1792 2 1303 2204 16 0 0 chr17 94221632 94221889 -1050762 - MT2_Mm LTR ERVL -210 283 27 2 1303 4301 309 29 18 chr17 94221889 94223419 -1049232 - ETnERV2-int LTR ERVK -4410 1757 347 2 1303 2216 130 19 8 chr17 94223681 94224045 -1048606 - RLTR9A LTR ERVK 0 368 1 3 1303 1487 243 136 42 chr17 94224255 94225106 -1047545 + L1_Mur3 LINE L1 2324 3254 -2626 3 1303 270 0 0 0 chr17 94225186 94225216 -1047435 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 3 1303 513 144 0 19 chr17 94225218 94225324 -1047327 - Lx3A LINE L1 -17 6964 6861 3 1303 319 262 61 45 chr17 94225580 94225712 -1046939 - MLT1A1 LTR MaLR -5 403 270 3 1303 1279 231 40 31 chr17 94225960 94226281 -1046370 + Lx8 LINE L1 6753 7076 -397 3 1303 2427 57 4 0 chr17 94226289 94226791 -1045860 + RLTR10C LTR ERVK 1 436 0 3 1303 983 278 86 46 chr17 94226794 94227167 -1045484 + Lx8 LINE L1 7086 7473 0 3 1303 790 252 389 15 chr17 94227186 94227397 -1045254 + MT2A LTR ERVL 1 289 -244 3 1303 1972 196 22 12 chr17 94227397 94227800 -1044851 - MTB_Mm LTR MaLR 0 407 1 3 1303 790 271 13 40 chr17 94227800 94227962 -1044689 + MT2A LTR ERVL 290 536 -65 3 1303 524 338 85 5 chr17 94228248 94228447 -1044204 + B4 SINE B4 4 218 -74 3 1303 318 165 0 0 chr17 94228614 94228660 -1043991 + A-rich Low_complexity Low_complexity 1 46 0 3 1303 1138 75 7 0 chr17 94228660 94228806 -1043845 + B1_Mus1 SINE Alu 2 148 0 3 1303 318 165 0 0 chr17 94228806 94228850 -1043801 + A-rich Low_complexity Low_complexity 47 90 0 3 1303 1297 207 43 105 chr17 94228868 94229267 -1043384 + ORR1D1 LTR MaLR 1 374 0 3 1303 275 119 0 0 chr17 94229570 94229612 -1043039 - U2 snRNA snRNA -146 42 1 3 1303 192 77 0 0 chr17 94229787 94229813 -1042838 + (TCTA)n Simple_repeat Simple_repeat 1 26 0 3 1303 228 356 98 10 chr17 94230735 94230837 -1041814 + MIRb SINE MIR 22 132 -136 3 1303 220 273 29 29 chr17 94231125 94231193 -1041458 - B1F1 SINE Alu -50 99 32 3 1303 231 133 0 0 chr17 94232196 94232241 -1040410 + (T)n Simple_repeat Simple_repeat 1 45 0 3 1303 11277 145 34 16 chr17 94232301 94232544 -1040107 - L1_Mm LINE L1 -77 5806 5564 3 1303 5111 49 2 3 chr17 94232544 94233177 -1039474 - L1Md_F2 LINE L1 -12 6570 5939 3 1303 11277 145 34 16 chr17 94233177 94234887 -1037764 - L1_Mm LINE L1 -320 5563 3819 3 1303 4805 102 7 26 chr17 94234887 94235620 -1037031 + L1_Mus3 LINE L1 5918 6636 -2 3 1303 304 355 43 33 chr17 94235830 94236040 -1036611 + L3 LINE CR1 2043 2254 -2235 3 1303 569 232 105 30 chr17 94236765 94236965 -1035686 - Lx5 LINE L1 0 7050 6836 3 1303 1689 224 153 59 chr17 94238330 94238385 -1034266 - RLTR13D2 LTR ERVK -317 706 665 3 1303 6350 101 18 14 chr17 94238385 94239334 -1033317 - Lx3_Mus LINE L1 -3 7006 6054 3 1303 1689 224 153 59 chr17 94239334 94239923 -1032728 - RLTR13D2 LTR ERVK -359 664 1 3 1303 446 222 0 12 chr17 94240480 94240562 -1032089 + B3 SINE B2 1 81 -135 3 1304 507 165 12 0 chr17 94241331 94241416 -1031235 - B3 SINE B2 0 216 131 3 1304 366 23 0 0 chr17 94241529 94241572 -1031079 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 3 1304 397 329 152 37 chr17 94242343 94242586 -1030065 + B4A SINE B4 8 278 -14 3 1304 44 46 0 0 chr17 94244119 94244184 -1028467 + AT_rich Low_complexity Low_complexity 1 65 0 3 1304 290 312 31 0 chr17 94244906 94245002 -1027649 - MLT1D LTR MaLR -16 489 391 3 1304 575 333 73 49 chr17 94245004 94245291 -1027360 - MLT2B3 LTR ERVL 0 554 261 3 1304 309 324 0 9 chr17 94245296 94245405 -1027246 + HAL1-2a_MD LINE L1 2345 2452 -572 3 1304 455 362 62 25 chr17 94245434 94245676 -1026975 - MLT2B3 LTR ERVL -277 238 1 3 1304 306 284 123 49 chr17 94245676 94245828 -1026823 - MLT1D LTR MaLR -114 391 228 3 1304 411 312 21 14 chr17 94245856 94245996 -1026655 - MLT1D LTR MaLR -362 143 3 3 1304 192 40 0 0 chr17 94247145 94247170 -1025481 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 1304 678 130 0 0 chr17 94247254 94247362 -1025289 + (GA)n Simple_repeat Simple_repeat 1 108 0 3 1304 239 331 48 95 chr17 94247362 94247509 -1025142 - B3 SINE B2 -76 140 1 3 1304 31 68 0 0 chr17 94248278 94248337 -1024314 + AT_rich Low_complexity Low_complexity 1 59 0 3 1304 850 267 44 0 chr17 94248420 94248626 -1024025 + B3 SINE B2 2 216 0 3 1304 462 336 77 54 chr17 94249046 94249340 -1023311 + B4A SINE B4 9 276 -16 3 1304 324 241 0 0 chr17 94249349 94249465 -1023186 + (CA)n Simple_repeat Simple_repeat 2 117 0 3 1304 227 307 12 116 chr17 94249474 94249647 -1023004 + L1M1 LINE L1 5781 5935 -365 3 1304 834 134 163 34 chr17 94250987 94251165 -1021486 + ORR1A4 LTR MaLR 3 203 -126 3 1304 508 312 50 19 chr17 94251539 94251699 -1020952 + B3A SINE B2 1 165 -33 3 1304 22 0 0 0 chr17 94251930 94251952 -1020699 + AT_rich Low_complexity Low_complexity 1 22 0 3 1304 360 336 13 46 chr17 94252061 94252298 -1020353 - L1MC3 LINE L1 -281 7504 7276 3 1304 1750 234 14 19 chr17 94252305 94252724 -1019927 + MTC LTR MaLR 4 420 -1 3 1304 4145 121 36 87 chr17 94252814 94253666 -1018985 + RMER17D2 LTR ERVK 1 809 0 3 1304 2352 166 7 0 chr17 94253676 94254087 -1018564 + L1_Mur2 LINE L1 5042 5455 -422 3 1304 13875 155 18 18 chr17 94254086 94256652 -1015999 - L1_Mur1 LINE L1 -846 5040 2476 3 1304 5985 123 57 18 chr17 94256647 94257647 -1015004 + Lx LINE L1 5610 6648 -6 3 1304 459 132 42 42 chr17 94257750 94257845 -1014806 - ORR1B1 LTR MaLR 0 394 300 3 1304 1928 187 74 76 chr17 94257845 94258058 -1014593 - RLTR11A2 LTR ERVK -13 514 292 3 1304 645 14 0 0 chr17 94258058 94258132 -1014519 + (TTTTC)n Simple_repeat Simple_repeat 3 76 0 3 1304 1928 187 74 76 chr17 94258132 94258153 -1014498 - RLTR11A2 LTR ERVK -236 291 291 3 1304 3256 44 32 0 chr17 94258153 94258560 -1014091 - L1Md_T LINE L1 -2 6580 6161 3 1304 1928 187 74 76 chr17 94258560 94258839 -1013812 - RLTR11A2 LTR ERVK -236 291 1 3 1304 1415 163 135 27 chr17 94258839 94259125 -1013526 - ORR1B1 LTR MaLR -74 320 3 3 1304 234 284 15 0 chr17 94259282 94259349 -1013302 + CT-rich Low_complexity Low_complexity 2 69 0 3 1304 242 180 115 0 chr17 94259432 94259493 -1013158 - L1MC3 LINE L1 -1117 6668 6601 3 1304 270 116 0 0 chr17 94259683 94259726 -1012925 + (TC)n Simple_repeat Simple_repeat 1 43 0 3 1304 443 277 217 89 chr17 94259726 94259760 -1012891 - ID_B1 SINE B4 -46 246 215 3 1304 2971 52 0 8 chr17 94259760 94260132 -1012519 - L1Md_F3 LINE L1 -14 6570 6202 3 1304 443 205 79 79 chr17 94260132 94260248 -1012403 - ID_B1 SINE B4 -10 214 96 3 1304 3827 98 15 96 chr17 94260248 94260927 -1011724 - L1VL1 LINE L1 -5583 839 216 3 1304 237 256 37 37 chr17 94261551 94261632 -1011019 - Lx8 LINE L1 -1 7472 7392 3 1304 378 0 0 0 chr17 94262222 94262264 -1010387 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1304 606 317 117 24 chr17 94262533 94263032 -1009619 + L1MB7 LINE L1 5501 6044 -247 3 1304 27 0 0 0 chr17 94263923 94263950 -1008701 + AT_rich Low_complexity Low_complexity 1 27 0 3 1304 935 63 64 15 chr17 94264526 94264685 -1007966 - MTB LTR MaLR 0 407 202 3 1304 1438 81 0 0 chr17 94264676 94264874 -1007777 - MTA_Mm-int LTR MaLR -900 198 1 3 1304 2899 70 18 5 chr17 94264874 94265265 -1007386 - MTA_Mm LTR MaLR 0 396 1 3 1304 385 266 29 32 chr17 94265341 94265462 -1007189 + ORR1D2 LTR MaLR 1 122 -248 3 1304 951 287 78 15 chr17 94265525 94265857 -1006794 + MT2A LTR ERVL 171 523 -10 3 1304 235 43 62 42 chr17 94266765 94266813 -1005838 + (TTTTG)n Simple_repeat Simple_repeat 1 49 0 3 1304 1104 89 0 14 chr17 94266813 94266961 -1005690 - B1_Mus2 SINE Alu 0 147 2 3 1304 227 253 48 12 chr17 94267107 94267191 -1005460 - Lx4B LINE L1 -5 7053 6967 3 1304 239 398 26 9 chr17 94268060 94268174 -1004477 - B1F1 SINE Alu -21 128 13 3 1304 285 219 61 0 chr17 94268344 94268426 -1004225 - Lx7 LINE L1 0 7696 7610 3 1304 489 34 0 0 chr17 94268444 94268503 -1004148 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 1304 1758 241 101 67 chr17 94268503 94269100 -1003551 - Lx7 LINE L1 -175 7521 6905 3 1304 432 340 44 19 chr17 94269261 94269420 -1003231 - RSINE1 SINE B4 0 165 3 3 1304 314 310 25 25 chr17 94270169 94270288 -1002363 - HAL1b LINE L1 -522 1487 1369 3 1304 195 129 0 0 chr17 94270559 94270590 -1002061 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1304 1705 62 0 0 chr17 94270599 94270823 -1001828 - L1Md_A LINE L1 0 6582 6359 3 1304 312 208 83 0 chr17 94270856 94270928 -1001723 + Lx7 LINE L1 6932 7009 -687 3 1304 418 305 42 79 chr17 94271437 94271818 -1000833 + L1MCa LINE L1 710 1076 -4969 3 1304 717 294 159 29 chr17 94272218 94273897 -998754 + L1MCa LINE L1 1213 3120 -3444 3 1304 25 0 0 0 chr17 94273898 94273923 -998728 + AT_rich Low_complexity Low_complexity 1 25 0 3 1304 662 257 83 6 chr17 94273923 94274103 -998548 - B3 SINE B2 -11 205 12 3 1304 283 240 39 29 chr17 94274108 94274211 -998440 + L1MCa LINE L1 3146 3249 -3315 3 1304 264 30 0 0 chr17 94274422 94274455 -998196 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1304 369 0 0 0 chr17 94274455 94274495 -998156 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 1304 1164 223 8 12 chr17 94274497 94274756 -997895 - Lx6 LINE L1 -348 7112 6855 3 1304 1111 68 0 7 chr17 94274941 94275089 -997562 + B1_Mm SINE Alu 1 147 0 3 1304 241 47 0 44 chr17 94275089 94275134 -997517 + (CAAAAA)n Simple_repeat Simple_repeat 6 48 0 3 1304 480 35 0 0 chr17 94275135 94275193 -997458 + (GGAA)n Simple_repeat Simple_repeat 3 60 0 3 1304 524 163 12 0 chr17 94275635 94275723 -996928 + PB1D10 SINE Alu 27 125 -2 3 1304 441 0 0 0 chr17 94276079 94276128 -996523 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1304 236 250 0 19 chr17 94276446 94276499 -996152 + CT-rich Low_complexity Low_complexity 2 53 0 3 1304 494 258 47 73 chr17 94276810 94277002 -995649 + B3 SINE B2 26 212 -4 3 1304 225 221 128 0 chr17 94277875 94277961 -994690 - L1MEg2 LINE L1 -5316 2234 2138 3 1304 240 308 72 36 chr17 94278377 94278488 -994163 - L1MEg2 LINE L1 -5970 482 368 3 1304 239 233 171 23 chr17 94278616 94278704 -993947 + L2c LINE L2 3286 3386 -1 3 1304 1078 92 0 0 chr17 94278976 94279117 -993534 + B1_Mus1 SINE Alu 2 142 -6 3 1304 273 307 146 6 chr17 94279695 94279859 -992792 - MER3 DNA MER1_type -1 208 22 3 1304 343 323 172 8 chr17 94280929 94281063 -991588 + Lx8 LINE L1 7174 7329 -144 3 1304 2944 90 29 0 chr17 94281072 94281484 -991167 + Lx3_Mus LINE L1 6102 6525 -484 3 1304 21 0 0 0 chr17 94281506 94281527 -991124 + AT_rich Low_complexity Low_complexity 1 21 0 4 1304 528 45 0 0 chr17 94281688 94281755 -990896 + (CA)n Simple_repeat Simple_repeat 1 67 0 4 1304 294 339 106 47 chr17 94281884 94282119 -990532 - MLT1D LTR MaLR -46 459 211 4 1304 647 259 142 20 chr17 94282316 94282513 -990138 + RMER21B LTR ERV1 347 567 -275 4 1304 203 304 84 48 chr17 94282701 94282784 -989867 - L2 LINE L2 -798 2621 2536 4 1304 953 21 20 27 chr17 94282816 94282964 -989687 + (GAGAA)n Simple_repeat Simple_repeat 4 150 0 4 1304 228 317 93 55 chr17 94283069 94283326 -989325 - L3 LINE CR1 -109 4380 4114 4 1304 186 43 0 0 chr17 94284321 94284344 -988307 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 1304 1061 88 0 0 chr17 94284344 94284481 -988170 - B1_Mm SINE Alu -10 137 1 4 1304 8419 43 1 1 chr17 94284491 94286149 -986502 - L1Md_F3 LINE L1 0 6584 4927 4 1304 181 215 90 30 chr17 94288283 94288350 -984301 + MIR SINE MIR 99 169 -93 4 1304 572 243 225 0 chr17 94288787 94288960 -983691 - B3 SINE B2 -3 213 2 4 1304 539 29 14 0 chr17 94289568 94289637 -983014 + (TC)n Simple_repeat Simple_repeat 1 70 0 4 1304 282 263 0 0 chr17 94289643 94289738 -982913 + CT-rich Low_complexity Low_complexity 2 96 0 4 1304 24 32 0 0 chr17 94290091 94290122 -982529 + AT_rich Low_complexity Low_complexity 1 31 0 4 1304 483 291 94 11 chr17 94290159 94290350 -982301 - B3 SINE B2 -9 207 1 4 1304 360 0 0 0 chr17 94290929 94290969 -981682 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1304 234 204 20 30 chr17 94292606 94292707 -979944 + (TA)n Simple_repeat Simple_repeat 1 100 0 4 1304 288 0 0 0 chr17 94292725 94292757 -979894 + (TA)n Simple_repeat Simple_repeat 1 32 0 4 1304 13572 65 2 1 chr17 94293226 94295714 -976937 + L1Md_F LINE L1 549 3039 -2844 4 1304 331 257 190 35 chr17 94296009 94296145 -976506 + L1M4 LINE L1 4884 5038 -1108 4 1304 766 234 67 34 chr17 94296145 94296353 -976298 + B3 SINE B2 2 216 0 4 1304 331 257 190 35 chr17 94296353 94296563 -976088 + L1M4 LINE L1 5039 5284 -862 4 1304 312 317 273 0 chr17 94296564 94296692 -975959 + RSINE1 SINE B4 3 165 0 4 1304 360 258 157 35 chr17 94296713 94296937 -975714 + L1M4 LINE L1 5279 5516 -657 4 1304 216 0 0 0 chr17 94297325 94297349 -975302 + (TTAGGG)n Simple_repeat Simple_repeat 5 28 0 4 1304 523 304 181 25 chr17 94297512 94297755 -974896 + B4A SINE B4 2 282 -10 4 1304 213 216 20 0 chr17 94297781 94297832 -974819 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1304 247 288 30 0 chr17 94298089 94298155 -974496 - LTR33 LTR ERVL -4 511 444 4 1304 396 0 0 0 chr17 94298728 94298772 -973879 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 4 1304 216 244 0 0 chr17 94298866 94298911 -973740 + GA-rich Low_complexity Low_complexity 2 46 0 4 1304 568 251 152 5 chr17 94299122 94299306 -973345 + B3 SINE B2 1 211 -5 4 1304 193 265 0 39 chr17 94301269 94301320 -971331 + MIRb SINE MIR 188 236 -32 4 1304 267 31 0 0 chr17 94301614 94301646 -971005 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 4 1304 346 267 32 48 chr17 94301649 94301775 -970876 - Lx4B LINE L1 -3 7055 6932 4 1304 379 360 64 8 chr17 94304321 94304556 -968095 - MIR SINE MIR 0 262 15 4 1304 3475 125 49 20 chr17 94304783 94305378 -967273 - RLTR13D6 LTR ERVK 0 902 291 4 1304 8065 53 3 2 chr17 94305378 94306948 -965703 - L1Md_F2 LINE L1 0 6582 5012 4 1304 1610 115 49 94 chr17 94306948 94307256 -965395 - RLTR13D6 LTR ERVK -608 294 1 4 1304 311 362 0 0 chr17 94307263 94307357 -965294 - B1F1 SINE Alu -55 94 1 4 1304 2867 81 47 111 chr17 94307851 94308366 -964285 + RLTR45 LTR ERVK 1 482 0 4 1304 21 36 0 0 chr17 94308769 94308797 -963854 + AT_rich Low_complexity Low_complexity 1 28 0 4 1304 261 83 0 0 chr17 94308906 94308942 -963709 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1304 543 31 0 0 chr17 94310918 94310983 -961668 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1304 25 0 0 0 chr17 94311607 94311632 -961019 + AT_rich Low_complexity Low_complexity 1 25 0 4 1304 195 129 0 0 chr17 94313160 94313191 -959460 + (TCC)n Simple_repeat Simple_repeat 3 33 0 4 1304 539 48 36 0 chr17 94314044 94314128 -958523 + L1Md_F3 LINE L1 6481 6567 -17 4 1304 21 36 0 0 chr17 94314128 94314156 -958495 + AT_rich Low_complexity Low_complexity 1 28 0 4 1304 430 255 75 62 chr17 94314191 94314337 -958314 + B4 SINE B4 81 228 -64 4 1304 5261 144 25 29 chr17 94314337 94315259 -957392 - L1_Mus4 LINE L1 -281 5602 4685 4 1304 6936 98 24 5 chr17 94315253 94316242 -956409 + L1_Mus4 LINE L1 5629 6636 0 4 1304 23 68 0 0 chr17 94316873 94316917 -955734 + AT_rich Low_complexity Low_complexity 1 44 0 4 1304 3342 248 75 39 chr17 94316994 94317567 -955084 + L1_Mur3 LINE L1 241 862 -6866 4 1304 3322 38 5 0 chr17 94317567 94317961 -954690 + MTA_Mm LTR MaLR 1 396 0 4 1304 8756 50 6 1 chr17 94317961 94319054 -953597 + MTA_Mm-int LTR MaLR 1 1098 0 4 1304 3291 38 5 0 chr17 94319054 94319448 -953203 + MTA_Mm LTR MaLR 1 396 0 4 1304 3342 253 76 33 chr17 94319448 94320050 -952601 + L1_Mur3 LINE L1 863 1476 -4404 4 1304 900 189 77 22 chr17 94320044 94320266 -952385 + L1_Mur3 LINE L1 3706 3939 -1941 4 1304 5088 191 34 10 chr17 94320287 94321390 -951261 + L1_Mur3 LINE L1 4169 5297 -583 4 1304 224 185 30 30 chr17 94321445 94321512 -951139 + T-rich Low_complexity Low_complexity 4 70 0 4 1304 2815 47 39 3 chr17 94321513 94321874 -950777 + MTB LTR MaLR 27 400 0 4 1304 240 35 0 0 chr17 94322142 94322171 -950480 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 4 1304 183 42 0 0 chr17 94322172 94322196 -950455 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1304 288 0 0 0 chr17 94322196 94322227 -950424 + (GA)n Simple_repeat Simple_repeat 1 32 0 4 1304 411 113 0 0 chr17 94322558 94322620 -950031 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 1304 26 0 0 0 chr17 94322650 94322676 -949975 + AT_rich Low_complexity Low_complexity 1 26 0 4 1304 225 191 0 0 chr17 94322876 94322918 -949733 - B3A SINE B2 -154 44 3 4 1304 541 258 168 3 chr17 94323036 94323336 -949315 + L1MCa LINE L1 2117 2468 -3916 4 1304 1155 215 0 5 chr17 94323336 94323551 -949100 - URR1B DNA MER1_type -11 214 1 4 1304 261 293 52 0 chr17 94323566 94323682 -948969 + L1MCa LINE L1 2482 2603 -3779 4 1304 319 236 345 0 chr17 94323690 94323800 -948851 + RSINE1 SINE B4 1 148 -17 4 1304 753 304 69 28 chr17 94323904 94324308 -948343 + L1MCa LINE L1 2622 3038 -3344 4 1304 23 0 0 0 chr17 94324349 94324372 -948279 + AT_rich Low_complexity Low_complexity 1 23 0 4 1304 340 313 0 0 chr17 94324611 94324694 -947957 + B4 SINE B4 1 83 -209 4 1304 23 0 0 0 chr17 94326661 94326684 -945967 + AT_rich Low_complexity Low_complexity 1 23 0 4 1304 293 333 20 0 chr17 94327239 94327338 -945313 - MLT1A1 LTR MaLR -267 141 41 4 1304 43 0 0 0 chr17 94327358 94327401 -945250 + AT_rich Low_complexity Low_complexity 1 43 0 4 1304 21 36 0 0 chr17 94327442 94327470 -945181 + AT_rich Low_complexity Low_complexity 1 28 0 4 1304 2677 231 65 21 chr17 94329281 94330385 -942266 + L1_Rod LINE L1 518 1681 -4166 4 1304 385 239 23 0 chr17 94330379 94330467 -942184 + Lx9 LINE L1 6556 6645 -999 4 1304 1894 184 46 55 chr17 94330467 94330561 -942090 + RLTR19-int LTR ERVK 757 843 -5294 4 1304 1411 65 15 5 chr17 94330561 94330762 -941889 - L1_Mus3 LINE L1 -6 6632 6430 4 1304 1894 191 48 55 chr17 94330762 94331179 -941472 + RLTR19-int LTR ERVK 844 1229 -4908 4 1304 250 62 0 0 chr17 94331338 94331370 -941281 + RLTR19-int LTR ERVK 2220 2251 -3886 4 1304 1124 65 29 75 chr17 94331370 94331563 -941088 - B2_Mm2 SINE B2 -6 187 2 4 1304 311 136 15 29 chr17 94331573 94331641 -941010 + RLTR19-int LTR ERVK 2264 2330 -3807 4 1304 699 156 30 0 chr17 94331686 94331821 -940830 + RLTR19-int LTR ERVK 2330 2468 -3669 4 1304 4971 112 12 13 chr17 94331822 94332590 -940061 - L1_Mus3 LINE L1 -7 6631 5865 4 1304 2314 121 30 3 chr17 94332590 94332954 -939697 + L1_Mus3 LINE L1 5454 5827 -56 4 1304 2724 89 45 10 chr17 94332954 94333351 -939300 - RLTR10A LTR ERVK 0 411 1 4 1304 5164 126 80 47 chr17 94333351 94334490 -938161 - RLTR10-int LTR ERVK -1 1986 1288 4 1304 2080 75 30 0 chr17 94334484 94334752 -937899 - IAP-d-int LTR ERVK -1260 5282 5007 4 1304 756 224 18 55 chr17 94334752 94334969 -937682 - IAP-d-int LTR ERVK -6039 503 295 4 1304 2034 80 15 80 chr17 94334942 94335268 -937383 - RLTR10-int LTR ERVK -1381 606 302 4 1304 2711 89 45 10 chr17 94335268 94335665 -936986 - RLTR10A LTR ERVK 0 411 1 4 1304 610 88 0 0 chr17 94335665 94335745 -936906 + L1_Mus3 LINE L1 5822 5901 -737 4 1304 5578 176 135 94 chr17 94335745 94336599 -936052 + RLTR19-int LTR ERVK 2461 3432 -2705 4 1304 862 115 44 13 chr17 94336599 94336757 -935894 + Lx3_Mus LINE L1 6006 6168 -841 4 1304 5578 176 135 94 chr17 94336757 94337575 -935076 + RLTR19-int LTR ERVK 3433 4365 -1772 4 1304 21 0 0 0 chr17 94337578 94337599 -935052 + AT_rich Low_complexity Low_complexity 1 21 0 4 1304 252 210 47 31 chr17 94337983 94338047 -934604 + RLTR19-int LTR ERVK 6073 6137 0 4 1304 288 238 93 122 chr17 94338183 94338195 -934456 + RLTR33 LTR ERVK 213 222 -274 4 1304 3014 39 0 3 chr17 94338195 94338552 -934099 + IAPEY2_LTR LTR ERVK 2 357 0 4 1304 3050 125 128 1 chr17 94338552 94339094 -933557 + RLTR33 LTR ERVK 1 603 -75 4 1304 2226 207 68 62 chr17 94339104 94339601 -933050 + Lx9 LINE L1 6995 7476 -168 4 1304 327 49 0 0 chr17 94339601 94339642 -933009 + (TA)n Simple_repeat Simple_repeat 1 41 0 4 1304 240 35 0 0 chr17 94339643 94339672 -932979 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 1304 2226 207 68 62 chr17 94339672 94339817 -932834 + Lx9 LINE L1 7477 7643 -1 4 1304 929 272 58 14 chr17 94340417 94340708 -931943 + ORR1D2 LTR MaLR 6 309 -61 4 1304 189 0 0 0 chr17 94340740 94340761 -931890 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 1304 414 53 0 0 chr17 94340807 94340864 -931787 + (GA)n Simple_repeat Simple_repeat 2 58 0 4 1304 3505 25 0 0 chr17 94341025 94341421 -931230 + MTA_Mm LTR MaLR 1 396 0 4 1304 24 32 0 0 chr17 94341439 94341470 -931181 + AT_rich Low_complexity Low_complexity 1 31 0 4 1304 1188 252 57 72 chr17 94341470 94341661 -930990 - Lx6 LINE L1 -31 7429 7234 4 1304 1315 85 5 11 chr17 94341661 94341852 -930799 + B2_Mm2 SINE B2 2 191 -4 4 1304 1188 252 57 72 chr17 94341852 94342049 -930602 - Lx6 LINE L1 -227 7233 7047 4 1304 1199 182 25 123 chr17 94342508 94342865 -929786 - RLTRETN_Mm LTR ERVK 0 322 1 4 1304 688 113 0 8 chr17 94342907 94343032 -929619 + L1_Mus4 LINE L1 6513 6636 0 4 1304 507 299 29 0 chr17 94343287 94343424 -929227 + ID_B1 SINE B4 82 222 -2 4 1304 816 226 124 72 chr17 94346405 94346767 -925884 - RLTR14 LTR ERV1 0 382 2 4 1304 1289 199 14 141 chr17 94346901 94347162 -925489 + MTC LTR MaLR 1 218 -203 4 1304 1711 33 0 5 chr17 94347162 94347374 -925277 - L1Md_F2 LINE L1 -3 6579 6369 4 1304 1289 199 14 141 chr17 94347374 94347475 -925176 + MTC LTR MaLR 219 317 -104 4 1304 514 55 250 22 chr17 94347479 94347571 -925080 + B1_Mus1 SINE Alu 36 148 0 4 1304 252 0 0 0 chr17 94347582 94347610 -925041 + (CCA)n Simple_repeat Simple_repeat 1 28 0 4 1304 501 0 0 42 chr17 94347615 94347687 -924964 + (CAAAA)n Simple_repeat Simple_repeat 4 72 0 4 1304 393 244 12 0 chr17 94347689 94347771 -924880 + MTC LTR MaLR 337 419 0 4 1304 336 294 95 14 chr17 94348160 94348308 -924343 + MLT1B LTR MaLR 12 171 -219 4 1304 183 80 0 0 chr17 94348344 94348369 -924282 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 1304 469 407 91 7 chr17 94348964 94349239 -923412 + MLT1H LTR MaLR 42 339 -210 4 1304 637 301 194 49 chr17 94349248 94349637 -923014 - MER74C LTR ERVL 0 460 16 5 1304 3047 173 40 44 chr17 94350270 94351165 -921486 + L1_Mur1 LINE L1 5 1142 -5840 5 1304 11119 225 103 54 chr17 94351158 94354502 -918149 + L1_Mus1 LINE L1 1203 4733 -1150 5 1304 231 36 0 0 chr17 94354502 94354530 -918121 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 5 1304 11119 139 71 26 chr17 94354530 94356346 -916305 + L1_Mus1 LINE L1 4734 6567 0 5 1304 3363 133 279 12 chr17 94356360 94357084 -915567 + L1Md_F2 LINE L1 4670 5586 -297 5 1304 8140 35 12 1 chr17 94357084 94358069 -914582 + L1Md_F2 LINE L1 5587 6582 0 5 1304 23 0 0 0 chr17 94358069 94358092 -914559 + AT_rich Low_complexity Low_complexity 1 23 0 5 1304 264 130 0 0 chr17 94358099 94358145 -914506 + (A)n Simple_repeat Simple_repeat 1 46 0 5 1304 4195 87 13 3 chr17 94358148 94358748 -913903 + L1_Mur1 LINE L1 4985 5590 -296 5 1304 5383 142 34 21 chr17 94358748 94359729 -912922 + L1Md_F2 LINE L1 5588 6580 -2 5 1304 7056 112 6 8 chr17 94359731 94360787 -911864 + Lx3_Mus LINE L1 5956 7009 0 5 1304 280 211 167 0 chr17 94360814 94360928 -911723 - Lx9 LINE L1 -107 7537 7405 5 1304 345 242 63 13 chr17 94361061 94361220 -911431 + (CATATA)n Simple_repeat Simple_repeat 5 171 0 5 1304 260 286 20 13 chr17 94361603 94361752 -910899 + (TA)n Simple_repeat Simple_repeat 2 151 0 5 1304 502 279 106 0 chr17 94361753 94361932 -910719 + Kanga1 DNA Tc2 4 201 -1544 5 1304 276 330 84 106 chr17 94362129 94362641 -910010 + Kanga1 DNA Tc2 1090 1590 -155 5 1304 6525 114 3 1 chr17 94363566 94364516 -908135 - L1_Mus3 LINE L1 -2 6636 5685 5 1304 2269 110 0 3 chr17 94364513 94364840 -907811 + L1_Mus3 LINE L1 5375 5700 -183 5 1304 275 323 166 69 chr17 94364914 94365729 -906922 - MLT1H-int LTR MaLR -555 934 4 5 1304 401 230 23 0 chr17 94365882 94365969 -906682 - MTE2b LTR MaLR -2 377 289 5 1304 554 266 154 15 chr17 94365982 94366177 -906474 - MTE2b LTR MaLR -136 243 22 5 1304 868 310 149 60 chr17 94366192 94366744 -905907 - MTE2b-int LTR MaLR -1 1579 979 5 1304 610 225 8 8 chr17 94366799 94366929 -905722 - MTE2b LTR MaLR -2 377 248 5 1304 237 237 56 63 chr17 94368284 94368314 -904337 - Lx9 LINE L1 0 7644 7619 5 1304 2877 164 75 7 chr17 94368314 94368862 -903789 + RMER4B LTR ERVK 1 585 0 5 1304 237 237 56 63 chr17 94368862 94368915 -903736 - Lx9 LINE L1 -26 7618 7562 5 1304 441 0 0 0 chr17 94368915 94368964 -903687 + (TC)n Simple_repeat Simple_repeat 2 50 0 5 1304 237 237 56 63 chr17 94368964 94369005 -903646 - Lx9 LINE L1 -83 7561 7520 5 1304 342 93 58 11 chr17 94369006 94369093 -903558 + (TAGA)n Simple_repeat Simple_repeat 2 92 0 5 1304 1258 306 93 28 chr17 94369185 94369757 -902894 + Lx9 LINE L1 6821 7429 -215 5 1304 333 0 0 0 chr17 94369780 94369817 -902834 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 1304 203 284 24 12 chr17 94370344 94370426 -902225 + MIRb SINE MIR 186 268 0 5 1304 225 0 0 0 chr17 94370440 94370465 -902186 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 1304 4645 93 0 6 chr17 94370468 94371114 -901537 + L1_Mus2 LINE L1 5925 6566 0 5 1304 24 0 0 0 chr17 94371116 94371140 -901511 + AT_rich Low_complexity Low_complexity 1 24 0 5 1305 334 212 30 0 chr17 94372826 94372892 -899759 + RSINE1 SINE B4 49 116 -49 5 1305 357 62 0 0 chr17 94373175 94373223 -899428 + (CAGA)n Simple_repeat Simple_repeat 1 48 0 5 1305 204 358 67 21 chr17 94373266 94373460 -899191 + L2a LINE L2 3151 3353 -73 5 1305 22 35 0 0 chr17 94373488 94373517 -899134 + AT_rich Low_complexity Low_complexity 1 29 0 5 1305 2945 88 8 10 chr17 94373996 94374397 -898254 + MTB LTR MaLR 1 400 0 5 1305 559 252 9 0 chr17 94375704 94375811 -896840 - B1_Mur2 SINE Alu -36 113 6 5 1305 357 255 8 102 chr17 94375712 94375830 -896821 - MT2B LTR ERVL -343 258 152 5 1305 896 131 0 0 chr17 94375971 94376101 -896550 + MT2B LTR ERVL 1 130 -471 5 1305 4316 178 39 21 chr17 94376241 94377060 -895591 + Lx3C LINE L1 6141 6974 -2 5 1305 24 0 0 0 chr17 94377060 94377084 -895567 + AT_rich Low_complexity Low_complexity 1 24 0 5 1305 5892 111 15 6 chr17 94378425 94379293 -893358 - Lx LINE L1 -6 6648 5773 5 1305 5499 157 15 3 chr17 94379293 94380227 -892424 + Lx LINE L1 4848 5792 -91 5 1305 765 289 10 10 chr17 94380281 94380477 -892174 + B3A SINE B2 3 198 0 5 1305 308 349 41 37 chr17 94381309 94381553 -891098 + L1M5 LINE L1 5257 5501 -623 5 1305 23 0 0 0 chr17 94382965 94382988 -889663 + AT_rich Low_complexity Low_complexity 1 23 0 5 1305 211 196 0 42 chr17 94383093 94383141 -889510 + (TATG)n Simple_repeat Simple_repeat 1 46 0 5 1305 299 244 21 43 chr17 94383189 94383283 -889368 - PB1D10 SINE Alu -9 108 17 5 1305 28 71 0 0 chr17 94383302 94383358 -889293 + AT_rich Low_complexity Low_complexity 1 56 0 5 1305 306 266 103 50 chr17 94383683 94383933 -888718 + L1MA4 LINE L1 5642 5895 -405 5 1305 2233 137 48 0 chr17 94384234 94384607 -888044 + Lx2B LINE L1 6596 6986 -14 5 1305 429 20 0 0 chr17 94384607 94384657 -887994 + (TAA)n Simple_repeat Simple_repeat 1 50 0 5 1305 192 77 0 0 chr17 94384831 94384857 -887794 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 5 1305 198 191 0 0 chr17 94384907 94384954 -887697 + CT-rich Low_complexity Low_complexity 2 48 0 5 1305 321 250 0 0 chr17 94385000 94385060 -887591 + B1_Mur1 SINE Alu 64 123 -26 5 1305 393 22 0 0 chr17 94385256 94385302 -887349 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1305 4254 243 59 51 chr17 94385596 94387405 -885246 + RMER1A Other Other 1 1024 -6 5 1305 6066 103 29 1 chr17 94387467 94388338 -884313 - Lx LINE L1 -5 6649 5755 5 1305 2637 95 8 3 chr17 94388445 94388824 -883827 - L1_Mus3 LINE L1 0 6638 6258 5 1305 22 0 0 0 chr17 94388846 94388868 -883783 + AT_rich Low_complexity Low_complexity 1 22 0 5 1305 33 25 0 0 chr17 94388904 94388944 -883707 + AT_rich Low_complexity Low_complexity 1 40 0 5 1305 345 24 0 0 chr17 94388955 94388997 -883654 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1305 30 0 0 0 chr17 94389732 94389762 -882889 + AT_rich Low_complexity Low_complexity 1 30 0 5 1305 21 36 0 0 chr17 94389843 94389871 -882780 + AT_rich Low_complexity Low_complexity 1 28 0 5 1305 252 0 0 0 chr17 94390749 94390777 -881874 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 5 1305 246 145 0 0 chr17 94390888 94390935 -881716 - B1_Mur4 SINE Alu -1 149 102 5 1305 4896 130 5 3 chr17 94391680 94392445 -880206 + L1Md_A LINE L1 441 1207 -5517 5 1305 21250 169 62 8 chr17 94392444 94396640 -876011 + L1_Mur3 LINE L1 1165 5589 -297 5 1305 8126 42 3 1 chr17 94396640 94397634 -875017 + L1Md_F2 LINE L1 5587 6582 0 5 1305 21 0 0 0 chr17 94397832 94397853 -874798 + AT_rich Low_complexity Low_complexity 1 21 0 5 1305 279 54 0 0 chr17 94398192 94398229 -874422 + (TCC)n Simple_repeat Simple_repeat 2 38 0 5 1305 2068 32 0 4 chr17 94399046 94399296 -873355 + L1Md_F3 LINE L1 6335 6583 -1 5 1305 667 249 33 30 chr17 94399317 94399649 -873002 + L1M2 LINE L1 2888 3220 -2923 5 1305 259 349 16 5 chr17 94399691 94399881 -872770 + L1M2 LINE L1 4637 4828 -1315 5 1305 444 152 9 37 chr17 94400141 94400250 -872401 + Lx2B LINE L1 6894 6999 -1 5 1305 269 298 35 14 chr17 94400335 94400478 -872173 + L1M4 LINE L1 5057 5202 -944 5 1305 506 16 16 0 chr17 94400807 94400870 -871781 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 1305 668 316 106 30 chr17 94401034 94401373 -871278 - MER34A1 LTR ERV1 -222 365 1 5 1305 277 235 47 12 chr17 94402075 94402161 -870490 + L1MC3 LINE L1 7450 7538 -247 5 1305 513 0 0 0 chr17 94402169 94402226 -870425 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1305 690 47 0 0 chr17 94402226 94402311 -870340 + (GA)n Simple_repeat Simple_repeat 2 87 0 5 1305 228 298 60 0 chr17 94402504 94402588 -870063 - MTEa LTR MaLR -14 365 277 5 1305 230 219 68 0 chr17 94402940 94403013 -869638 + L1MC3 LINE L1 7701 7778 -7 5 1305 434 293 22 29 chr17 94403338 94403475 -869176 + B4 SINE B4 27 162 -130 5 1305 276 262 11 11 chr17 94403621 94403802 -868849 + (TA)n Simple_repeat Simple_repeat 1 181 0 5 1305 195 125 0 0 chr17 94404647 94404687 -867964 + (GA)n Simple_repeat Simple_repeat 1 40 0 5 1305 2068 150 51 6 chr17 94405218 94405574 -867077 + Lx3C LINE L1 6602 6973 -3 5 1305 21 36 0 0 chr17 94405874 94405902 -866749 + AT_rich Low_complexity Low_complexity 1 28 0 5 1305 821 297 146 8 chr17 94405906 94406276 -866375 - Lx8 LINE L1 -6 7467 7047 5 1305 350 380 71 15 chr17 94406277 94406565 -866086 + Lx8 LINE L1 7034 7337 -136 5 1305 378 0 0 0 chr17 94406565 94406607 -866044 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1305 350 380 71 15 chr17 94406607 94406655 -865996 + Lx8 LINE L1 7338 7388 -85 5 1305 927 183 0 0 chr17 94407762 94407942 -864709 + CT-rich Low_complexity Low_complexity 1 180 0 5 1305 297 0 0 0 chr17 94411670 94411703 -860948 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 1305 326 295 132 94 chr17 94412444 94412657 -859994 + MER2 DNA MER2_type 125 345 0 5 1305 294 235 0 0 chr17 94414035 94414116 -858535 + (TG)n Simple_repeat Simple_repeat 2 82 0 5 1305 552 379 28 21 chr17 94414117 94414403 -858248 - B4A SINE B4 -2 290 3 5 1305 878 297 143 19 chr17 94414436 94414813 -857838 + BGLII_B LTR ERVK 1 424 -17 5 1305 1481 219 41 0 chr17 94415381 94415673 -856978 - Lx5 LINE L1 -180 6870 6567 5 1305 413 263 158 0 chr17 94415892 94416006 -856645 + RSINE1 SINE B4 5 136 -29 5 1305 812 115 0 14 chr17 94416011 94416152 -856499 + (CATA)n Simple_repeat Simple_repeat 4 142 0 5 1305 193 219 0 47 chr17 94416393 94416436 -856215 + L3 LINE CR1 936 976 -3513 5 1305 1141 62 11 0 chr17 94416693 94416869 -855782 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 5 1305 180 163 0 0 chr17 94416872 94416915 -855736 + (CATA)n Simple_repeat Simple_repeat 2 44 0 5 1305 444 167 83 0 chr17 94417144 94417264 -855387 - Lx9 LINE L1 -1 7643 7514 5 1305 596 194 7 0 chr17 94418406 94418545 -854106 + CT-rich Low_complexity Low_complexity 1 140 0 5 1305 477 0 0 0 chr17 94418549 94418602 -854049 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1305 35390 64 3 3 chr17 94418972 94425051 -847600 - L1Md_F2 LINE L1 -1 6584 408 6 1305 225 0 0 0 chr17 94425702 94425727 -846924 + (TC)n Simple_repeat Simple_repeat 2 26 0 6 1305 468 81 35 0 chr17 94425727 94425813 -846838 + (TA)n Simple_repeat Simple_repeat 1 90 0 6 1305 316 350 25 8 chr17 94426040 94426161 -846490 + B4A SINE B4 168 290 -2 6 1305 213 39 0 0 chr17 94426175 94426201 -846450 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 1305 3994 2 0 0 chr17 94426714 94427157 -845494 + L1Md_A LINE L1 6140 6582 0 6 1305 462 114 0 0 chr17 94427649 94427728 -844923 + (TG)n Simple_repeat Simple_repeat 1 79 0 6 1305 2910 91 17 2 chr17 94427864 94428283 -844368 + L1_Mus4 LINE L1 6205 6629 -7 6 1305 21 71 0 0 chr17 94428386 94428428 -844223 + AT_rich Low_complexity Low_complexity 1 42 0 6 1305 3243 96 19 2 chr17 94428765 94429236 -843415 + Lx3A LINE L1 6501 6979 -2 6 1305 1017 47 0 0 chr17 94429467 94429594 -843057 + (CAAAG)n Simple_repeat Simple_repeat 1 127 0 6 1305 2417 50 0 0 chr17 94429817 94430115 -842536 - L1Md_F2 LINE L1 -366 5517 5220 6 1305 507 65 0 0 chr17 94430116 94430178 -842473 + L1Md_F2 LINE L1 5525 5586 -297 6 1305 7528 73 4 3 chr17 94430179 94431223 -841428 + L1Md_F2 LINE L1 5588 6582 0 6 1305 337 55 26 40 chr17 94431880 94431956 -840695 + (TATAA)n Simple_repeat Simple_repeat 3 77 0 6 1305 531 0 0 0 chr17 94434387 94434446 -838205 + (TC)n Simple_repeat Simple_repeat 2 60 0 6 1305 369 102 0 0 chr17 94434446 94434504 -838147 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1305 562 314 47 66 chr17 94434524 94434987 -837664 + RLTR12B LTR ERVK 9 334 -25 6 1305 604 94 71 0 chr17 94435408 94435535 -837116 - L1_Mus3 LINE L1 0 6638 6503 6 1305 4280 135 35 0 chr17 94435535 94436268 -836383 - L1_Mm LINE L1 -2086 3797 3039 6 1305 621 273 28 14 chr17 94436268 94436413 -836238 + B3 SINE B2 29 175 -41 6 1305 369 0 0 0 chr17 94436414 94436455 -836196 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 6 1305 249 373 111 0 chr17 94436604 94436821 -835830 + MIR SINE MIR 1 241 -21 6 1305 4499 79 3 0 chr17 94438372 94438966 -833685 + L1_Mus1 LINE L1 5972 6567 0 6 1305 213 121 0 0 chr17 94438970 94439003 -833648 + (A)n Simple_repeat Simple_repeat 1 33 0 6 1305 401 260 56 39 chr17 94439434 94439614 -833037 + L1MC3 LINE L1 6528 6710 -1075 6 1305 281 232 0 0 chr17 94439798 94439854 -832797 + ORR1C2 LTR MaLR 1 56 -322 6 1305 294 29 0 0 chr17 94439856 94439891 -832760 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1305 1029 218 49 29 chr17 94439899 94440144 -832507 + ORR1C2 LTR MaLR 135 384 0 6 1305 1152 292 133 35 chr17 94440145 94441067 -831584 + L1MC3 LINE L1 6758 7770 -15 6 1305 255 349 109 62 chr17 94441552 94441763 -830888 + MIR SINE MIR 36 256 -6 6 1305 488 303 91 0 chr17 94441941 94442073 -830578 - RSINE1 SINE B4 -6 159 16 6 1305 333 0 0 0 chr17 94442116 94442153 -830498 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1305 22 0 0 0 chr17 94442226 94442248 -830403 + AT_rich Low_complexity Low_complexity 1 22 0 6 1305 556 325 94 33 chr17 94442255 94442745 -829906 + L1MD3 LINE L1 7354 7873 -122 6 1305 2838 84 21 0 chr17 94442794 94443176 -829475 + L1_Mus1 LINE L1 6178 6567 0 6 1305 210 222 0 0 chr17 94443411 94443465 -829186 + GA-rich Low_complexity Low_complexity 2 55 0 6 1305 3374 38 2 0 chr17 94444200 94444595 -828056 + MTA_Mm LTR MaLR 1 396 0 6 1305 2920 76 43 0 chr17 94445030 94445427 -827224 + Lx3_Mus LINE L1 6543 6956 -53 6 1305 519 123 0 0 chr17 94446179 94446260 -826391 + (GGAA)n Simple_repeat Simple_repeat 1 81 0 6 1305 1497 205 30 86 chr17 94446263 94446658 -825993 - ORR1D1 LTR MaLR -1 373 1 6 1305 213 301 48 12 chr17 94447371 94447455 -825196 - MIRb SINE MIR -71 197 111 6 1305 463 114 0 33 chr17 94447872 94447963 -824688 + (TGG)n Simple_repeat Simple_repeat 1 88 0 6 1305 529 142 40 23 chr17 94447981 94448154 -824497 + (TG)n Simple_repeat Simple_repeat 2 177 0 6 1305 585 297 132 14 chr17 94448293 94448505 -824146 - B4A SINE B4 -55 237 1 6 1305 23 33 0 0 chr17 94448571 94448601 -824050 + AT_rich Low_complexity Low_complexity 1 30 0 6 1305 3889 47 6 31 chr17 94449560 94450068 -822583 + L1Md_F3 LINE L1 6090 6584 0 6 1305 57 39 0 0 chr17 94450073 94450151 -822500 + AT_rich Low_complexity Low_complexity 1 78 0 6 1305 243 103 0 0 chr17 94450155 94450194 -822457 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1305 192 40 0 0 chr17 94450346 94450371 -822280 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1305 1629 192 26 76 chr17 94450846 94451229 -821422 + ORR1D1 LTR MaLR 3 366 -8 6 1305 807 101 0 0 chr17 94451301 94451420 -821231 + (TTCC)n Simple_repeat Simple_repeat 2 120 0 6 1305 571 288 20 0 chr17 94451713 94451859 -820792 + RSINE1 SINE B4 2 150 -15 6 1305 23 54 0 0 chr17 94451877 94451914 -820737 + AT_rich Low_complexity Low_complexity 1 37 0 6 1305 646 100 16 16 chr17 94452095 94452217 -820434 + (CAGAGA)n Simple_repeat Simple_repeat 4 125 0 6 1305 532 286 29 0 chr17 94452243 94452383 -820268 + ID_B1 SINE B4 81 224 0 6 1305 21 36 0 0 chr17 94454327 94454355 -818296 + AT_rich Low_complexity Low_complexity 1 28 0 6 1305 3456 102 25 62 chr17 94455201 94455765 -816886 - Lx LINE L1 -10 6644 6102 6 1305 255 303 64 16 chr17 94455875 94456063 -816588 + L1M5 LINE L1 2750 2946 -3200 6 1305 22 0 0 0 chr17 94456526 94456548 -816103 + AT_rich Low_complexity Low_complexity 1 22 0 6 1305 2138 152 32 25 chr17 94457088 94457481 -815170 - L1_Mus4 LINE L1 -241 6809 6095 6 1305 4115 129 32 5 chr17 94457454 94458109 -814542 + Lx2 LINE L1 5857 6529 -468 6 1305 2712 102 14 16 chr17 94459516 94459953 -812698 + MusHAL1 LINE L1 609 1044 -1668 6 1305 459 270 0 0 chr17 94459961 94460098 -812553 - L1M4 LINE L1 -3381 2765 2629 6 1305 1101 231 9 52 chr17 94460108 94460341 -812310 - URR1B DNA MER1_type -2 223 1 6 1305 879 167 0 0 chr17 94460437 94460641 -812010 + (TA)n Simple_repeat Simple_repeat 1 204 0 6 1305 234 0 0 0 chr17 94462198 94462224 -810427 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6 1305 407 297 52 33 chr17 94463104 94463257 -809394 + B4A SINE B4 1 156 -136 6 1305 180 0 0 0 chr17 94463605 94463625 -809026 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 1305 1049 105 0 0 chr17 94463625 94463761 -808890 - B1_Mus2 SINE Alu -9 138 3 6 1305 191 61 30 0 chr17 94464458 94464491 -808160 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 6 1305 479 354 8 0 chr17 94464886 94465013 -807638 + B4A SINE B4 1 128 -164 6 1305 712 188 0 64 chr17 94465038 94465209 -807442 + RMER1C Other Other 1172 1331 -11 6 1305 365 355 133 37 chr17 94465726 94466243 -806408 + L1MC3 LINE L1 6657 7223 -562 6 1305 354 61 0 0 chr17 94466607 94466656 -805995 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1305 1218 219 85 102 chr17 94466690 94467218 -805433 - Lx9 LINE L1 -1 7643 7125 6 1305 277 269 60 0 chr17 94467288 94467355 -805296 - ID4_ SINE ID -3 80 10 6 1305 22 56 0 0 chr17 94467841 94467877 -804774 + AT_rich Low_complexity Low_complexity 1 36 0 6 1305 438 309 90 78 chr17 94468528 94468908 -803743 - RMER20B LTR ERVK -38 478 87 6 1305 474 248 33 0 chr17 94469625 94469778 -802873 + L1M2 LINE L1 5100 5257 -886 6 1305 1150 292 65 87 chr17 94469781 94470354 -802297 + RLTR20B3 LTR ERVK 1 560 -17 6 1305 500 317 27 7 chr17 94470410 94470556 -802095 + B4A SINE B4 6 154 -138 6 1305 6980 75 28 28 chr17 94471404 94472429 -800222 - Lx3_Mus LINE L1 -5 7004 5980 6 1305 567 259 192 65 chr17 94472551 94473071 -799580 + L1M3 LINE L1 4239 4824 -1319 6 1305 227 296 25 0 chr17 94473322 94473403 -799248 - Lx7 LINE L1 -11 7685 7603 6 1305 318 346 29 47 chr17 94473522 94473798 -798853 + L1M2 LINE L1 4843 5113 -1030 6 1305 536 380 15 15 chr17 94473881 94474079 -798572 - MLT1G1 LTR MaLR -2 577 380 6 1305 783 270 67 25 chr17 94474084 94474323 -798328 - MTD LTR MaLR -4 415 167 6 1305 1026 157 161 9 chr17 94474334 94474552 -798099 + MTD LTR MaLR 169 419 0 6 1305 254 296 39 58 chr17 94474552 94474655 -797996 + MER82 DNA MER2_type 492 592 -61 6 1305 600 284 6 36 chr17 94475418 94475586 -797065 - RSINE1 SINE B4 0 165 3 6 1305 1228 243 108 12 chr17 94475701 94476034 -796617 - ORR1D2 LTR MaLR -3 367 3 6 1305 414 0 0 0 chr17 94476427 94476473 -796178 + (TA)n Simple_repeat Simple_repeat 1 46 0 6 1305 1689 73 0 0 chr17 94476632 94476851 -795800 - L1Md_F2 LINE L1 -486 6096 5878 6 1305 1990 79 229 0 chr17 94476838 94477236 -795415 + L1Md_F2 LINE L1 6080 6568 -14 6 1305 221 308 64 40 chr17 94477305 94477430 -795221 - B1F SINE Alu 0 149 22 6 1305 680 312 49 5 chr17 94477328 94477531 -795120 - B4A SINE B4 -79 213 2 6 1305 755 71 204 0 chr17 94478697 94478810 -793841 + B1_Mus1 SINE Alu 1 136 -12 6 1305 222 37 0 0 chr17 94478811 94478838 -793813 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1305 591 94 0 0 chr17 94479098 94479194 -793457 + (TG)n Simple_repeat Simple_repeat 1 96 0 6 1305 418 244 67 0 chr17 94479238 94479328 -793323 - B3A SINE B2 -82 116 21 6 1305 308 377 83 25 chr17 94479352 94479798 -792853 + Lx8 LINE L1 7000 7471 -2 6 1305 181 163 41 0 chr17 94479912 94479961 -792690 + CT-rich Low_complexity Low_complexity 3 53 0 6 1305 510 308 41 6 chr17 94480056 94480233 -792418 - MLT1A0 LTR MaLR -20 370 186 6 1305 270 0 0 0 chr17 94480284 94480314 -792337 + (GA)n Simple_repeat Simple_repeat 1 30 0 6 1305 346 257 103 97 chr17 94480328 94480513 -792138 - RMER20B LTR ERVK -304 323 138 6 1305 893 294 91 38 chr17 94480810 94481435 -791216 - L1MB4 LINE L1 -269 5911 5254 7 1305 310 366 138 3 chr17 94481517 94481851 -790800 - L1MD LINE L1 -2445 3701 3323 7 1305 405 0 0 0 chr17 94482234 94482279 -790372 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1305 921 104 7 48 chr17 94482280 94482553 -790098 + GA-rich Low_complexity Low_complexity 1 261 0 7 1305 201 237 0 0 chr17 94482557 94482595 -790056 + polypurine Low_complexity Low_complexity 5 42 0 7 1305 333 0 0 0 chr17 94484464 94484501 -788150 + (A)n Simple_repeat Simple_repeat 1 37 0 7 1305 335 280 9 107 chr17 94484501 94484613 -788038 - RMER15 LTR ERVL -42 533 433 7 1305 1520 37 20 30 chr17 94484906 94485103 -787548 - B2_Mm2 SINE B2 0 195 1 7 1305 505 268 114 38 chr17 94485431 94485563 -787088 - RSINE1 SINE B4 -20 145 4 7 1305 495 211 86 43 chr17 94485692 94485831 -786820 + Lx2B LINE L1 6797 6941 -59 7 1305 660 282 46 77 chr17 94488050 94488246 -784405 + B4 SINE B4 8 197 -95 7 1305 474 18 0 0 chr17 94488357 94488412 -784239 + (CA)n Simple_repeat Simple_repeat 1 55 0 7 1305 396 0 0 0 chr17 94488499 94488543 -784108 + (TA)n Simple_repeat Simple_repeat 2 45 0 7 1305 2807 107 105 2 chr17 94489004 94489433 -783218 + MT2C_Mm LTR ERVL 1 473 -2 7 1305 441 0 0 0 chr17 94493141 94493190 -779461 + (TA)n Simple_repeat Simple_repeat 1 49 0 7 1305 1103 317 81 41 chr17 94494942 94495425 -777226 + MLT1D LTR MaLR 3 504 -1 7 1305 2760 269 49 54 chr17 94495967 94496264 -776387 + Lx8 LINE L1 6510 6793 -680 7 1305 2156 100 0 0 chr17 94496264 94496564 -776087 - L1_Mus1 LINE L1 0 6567 6268 7 1305 2760 269 49 54 chr17 94496564 94497227 -775424 + Lx8 LINE L1 6794 7465 -8 7 1305 494 320 13 0 chr17 94497705 94497861 -774790 - MER58A DNA MER1_type -17 207 50 7 1305 24 32 0 0 chr17 94497861 94497892 -774759 + AT_rich Low_complexity Low_complexity 1 31 0 7 1305 2973 87 7 15 chr17 94499530 94499940 -772711 + MTB_Mm LTR MaLR 1 407 0 7 1305 9448 62 1 1 chr17 94500002 94501192 -771459 + L1_Mm LINE L1 4397 5586 -297 1 1305 7971 50 5 2 chr17 94501192 94502185 -770466 + L1Md_F2 LINE L1 5587 6582 0 2 1305 9448 62 1 1 chr17 94502185 94502198 -770453 + L1_Mm LINE L1 5587 5599 -284 1 1305 275 281 87 52 chr17 94502439 94502612 -770039 - MER2 DNA MER2_type -43 302 124 3 163 475 306 86 120 chr17 94502628 94502929 -769722 + B4A SINE B4 2 292 0 4 1306 342 0 0 0 chr17 94502954 94502992 -769659 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1306 805 296 66 48 chr17 94503602 94504099 -768552 - L1MA8 LINE L1 -441 5850 5345 6 1306 575 353 32 7 chr17 94504110 94504395 -768256 + B4A SINE B4 1 292 0 7 1306 208 261 14 14 chr17 94504396 94504466 -768185 + (CATA)n Simple_repeat Simple_repeat 2 71 0 8 1306 1712 212 46 43 chr17 94504494 94504889 -767762 + MTC LTR MaLR 3 398 -23 9 1306 687 255 84 60 chr17 94504906 94505286 -767365 - L1MA8 LINE L1 -849 5291 4903 6 1306 1682 198 28 67 chr17 94505497 94505886 -766765 - ORR1D1 LTR MaLR 0 374 1 1 1306 260 317 79 0 chr17 94505975 94506076 -766575 + MLT1A0 LTR MaLR 1 109 -256 1 1306 12826 112 12 22 chr17 94506630 94508758 -763893 + MusHAL1 LINE L1 212 2317 -395 1 1306 1636 97 8 4 chr17 94508758 94508997 -763654 + L1_Mus3 LINE L1 6391 6630 -8 1 1306 12826 112 12 22 chr17 94508997 94509012 -763639 + MusHAL1 LINE L1 2318 2332 -380 1 1306 5946 77 5 7 chr17 94509114 94509943 -762708 + RLTR22_Mus LTR ERVK 1 827 -981 1 1306 287 318 135 25 chr17 94510163 94510363 -762288 + RMER12 LTR ERVK 1101 1322 0 1 1306 402 369 87 38 chr17 94510885 94511231 -761420 - LTR83 LTR ERVL -170 610 248 1 1306 769 110 8 8 chr17 94511532 94511660 -760991 + (TA)n Simple_repeat Simple_repeat 2 129 0 1 1306 399 217 17 0 chr17 94511664 94511784 -760867 + Lx9 LINE L1 7516 7637 -7 1 1306 2936 81 13 0 chr17 94512389 94512784 -759867 - MTB LTR MaLR 0 400 1 1 1306 351 0 0 0 chr17 94512968 94513007 -759644 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 1306 321 314 174 38 chr17 94513246 94513481 -759170 + HAL1 LINE L1 1192 1458 -1049 2 1306 541 277 89 12 chr17 94513496 94513664 -758987 + B3A SINE B2 1 181 -14 2 1306 263 256 56 44 chr17 94513808 94513898 -758753 - MLT1I LTR MaLR -3 408 318 2 1306 397 292 22 7 chr17 94514205 94514343 -758308 + HAL1 LINE L1 1631 1770 -737 2 1306 280 279 12 0 chr17 94514465 94514551 -758100 - L1MCb LINE L1 -2412 4152 4066 2 1306 212 0 0 35 chr17 94514760 94514789 -757862 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 1306 317 346 38 42 chr17 94514802 94515067 -757584 - L1MCb LINE L1 -3197 3367 3104 2 1306 222 232 10 31 chr17 94515286 94515384 -757267 + CT-rich Low_complexity Low_complexity 2 97 0 2 1306 201 74 0 0 chr17 94516102 94516129 -756522 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1306 368 282 53 26 chr17 94516312 94516425 -756226 - PB1D10 SINE Alu -1 116 1 2 1306 228 245 37 9 chr17 94517164 94517271 -755380 + (TA)n Simple_repeat Simple_repeat 1 110 0 2 1306 1268 270 138 33 chr17 94517327 94517947 -754704 - L1MC1 LINE L1 -167 6007 5310 3 1306 884 141 173 30 chr17 94517949 94518146 -754505 + URR1A DNA MER1_type 2 226 0 3 1306 525 304 60 40 chr17 94518208 94518743 -753908 - L1MCb LINE L1 -5436 1315 687 2 1306 1778 188 47 71 chr17 94519295 94519457 -753194 - RMER1C Other Other 0 1342 1195 3 1306 207 0 0 0 chr17 94519457 94519480 -753171 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1306 1778 188 47 71 chr17 94519480 94519741 -752910 - RMER1C Other Other -148 1194 929 3 1306 425 210 12 24 chr17 94519740 94519823 -752828 + RMER1C Other Other 215 296 -1046 3 1306 289 214 0 0 chr17 94519804 94519860 -752791 + RMER1B Other Other 47 102 -964 3 1306 862 336 80 3 chr17 94520209 94520558 -752093 + RMER1C Other Other 506 881 -461 3 1306 1009 164 223 25 chr17 94520620 94520683 -751968 - Lx9 LINE L1 0 7644 7577 3 1306 450 0 0 0 chr17 94520683 94520733 -751918 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 1306 1009 164 223 25 chr17 94520733 94520790 -751861 - Lx9 LINE L1 -68 7576 7487 3 1306 189 0 0 0 chr17 94520790 94520811 -751840 + (TA)n Simple_repeat Simple_repeat 1 21 0 3 1306 1009 164 223 25 chr17 94520811 94521008 -751643 - Lx9 LINE L1 -158 7486 7266 3 1306 804 214 54 21 chr17 94522327 94522513 -750138 + B3A SINE B2 4 195 -3 4 1306 446 279 43 68 chr17 94522810 94523034 -749617 - MTEb LTR MaLR -23 356 114 4 1306 368 210 23 85 chr17 94523053 94523183 -749468 - Lx5 LINE L1 -3 7047 6926 4 1306 256 86 0 0 chr17 94524057 94524092 -748559 - URR1B DNA MER1_type 0 225 191 4 1306 277 277 160 47 chr17 94526012 94526118 -746533 + MLT1I LTR MaLR 219 336 -75 4 1306 1445 228 63 52 chr17 94526144 94526586 -746065 + RLTR11A LTR ERVK 47 523 -5 4 1306 2774 38 3 11 chr17 94526614 94526962 -745689 - L1Md_F2 LINE L1 -13 6569 6225 4 1306 652 91 9 9 chr17 94527558 94527669 -744982 + (TCTA)n Simple_repeat Simple_repeat 4 114 0 4 1306 317 224 69 26 chr17 94527858 94528011 -744640 - Lx9 LINE L1 -18 7626 7349 4 1306 511 306 41 93 chr17 94528143 94528486 -744165 - Lx9 LINE L1 -369 7275 6951 4 1306 1161 75 0 0 chr17 94528704 94528851 -743800 + B1_Mm SINE Alu 1 147 0 4 1306 426 249 67 17 chr17 94528880 94529060 -743591 + Lx7 LINE L1 7492 7680 -16 5 1306 790 95 35 23 chr17 94529645 94529818 -742833 + (CAGAGA)n Simple_repeat Simple_repeat 2 176 0 5 1306 2789 221 21 11 chr17 94530649 94531220 -741431 - Lx5 LINE L1 0 7050 6474 5 1306 443 254 9 0 chr17 94532013 94532123 -740528 - PB1D9 SINE Alu -8 112 2 5 1306 22 35 0 0 chr17 94532260 94532289 -740362 + AT_rich Low_complexity Low_complexity 1 29 0 5 1306 192 97 0 0 chr17 94532365 94532396 -740255 + (TTTTTG)n Simple_repeat Simple_repeat 5 35 0 5 1306 501 293 23 11 chr17 94532642 94532818 -739833 + L2 LINE L2 2263 2440 -979 5 1306 435 355 69 44 chr17 94532863 94533181 -739470 + L2 LINE L2 2728 3053 -366 5 1306 265 348 37 31 chr17 94533283 94533446 -739205 + RSINE1 SINE B4 2 165 0 5 1306 37827 13 2 7 chr17 94534020 94539220 -733431 + L1Md_A LINE L1 422 5586 -297 5 1306 8735 17 0 0 chr17 94539220 94540216 -732435 + L1Md_A LINE L1 5587 6582 0 5 1306 1264 246 27 32 chr17 94540216 94540260 -732391 + L1MC LINE L1 5616 5657 -676 5 1306 620 227 120 0 chr17 94540392 94540542 -732109 + Lx8 LINE L1 7039 7206 -267 6 1306 584 200 7 0 chr17 94540618 94540758 -731893 + GA-rich Low_complexity Low_complexity 2 142 0 6 1306 3048 62 12 7 chr17 94541563 94541971 -730680 - L1Md_F2 LINE L1 0 6582 6173 6 1306 2343 82 6 3 chr17 94541971 94542290 -730361 + L1Md_F2 LINE L1 5856 6175 -407 6 1306 5887 82 90 0 chr17 94542563 94543418 -729233 + Lx3_Mus LINE L1 6043 6989 -20 6 1306 183 42 0 0 chr17 94543418 94543442 -729209 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1306 27 29 0 0 chr17 94543452 94543486 -729165 + AT_rich Low_complexity Low_complexity 1 34 0 6 1306 285 254 145 0 chr17 94545662 94545800 -726851 + L1MEf LINE L1 1029 1195 -5438 6 1306 649 124 86 40 chr17 94546530 94546681 -725970 + Lx2 LINE L1 6838 6995 -2 6 1306 4902 132 31 4 chr17 94546699 94547468 -725183 - Lx LINE L1 0 6654 5865 6 1306 786 147 22 0 chr17 94547469 94547605 -725046 + L1_Mur2 LINE L1 4343 4481 -1396 6 1306 644 154 38 8 chr17 94547605 94547736 -724915 - RLTRETN_Mm LTR ERVK 0 322 188 7 1306 7065 153 37 59 chr17 94547751 94549166 -723485 + L1_Mm LINE L1 4481 5864 -19 7 1306 647 292 17 0 chr17 94549656 94549834 -722817 + B3A SINE B2 2 182 -16 7 1306 944 221 49 39 chr17 94550492 94550695 -721956 - B3 SINE B2 0 216 12 7 1306 21 57 0 0 chr17 94550753 94550788 -721863 + AT_rich Low_complexity Low_complexity 1 35 0 7 1306 1338 64 0 21 chr17 94550898 94551089 -721562 - L1Md_F2 LINE L1 -2 6580 6394 7 1306 5213 40 25 1 chr17 94551089 94552047 -720604 - L1Md_F2 LINE L1 -349 6233 5274 7 1306 5369 42 0 0 chr17 94552382 94553024 -719627 + L1Md_F2 LINE L1 5922 6563 -19 7 1306 556 288 14 0 chr17 94553493 94553632 -719019 + ID_B1 SINE B4 84 224 0 7 1306 22229 128 32 31 chr17 94553730 94556432 -716219 + L1_Mus3 LINE L1 410 3171 -2712 7 1306 990 3 0 81 chr17 94556432 94556766 -715885 + (TTTTG)n Simple_repeat Simple_repeat 1 307 0 7 1306 22229 122 15 16 chr17 94556766 94560239 -712412 + L1_Mus3 LINE L1 3172 6638 0 7 1306 850 231 9 60 chr17 94560287 94560503 -712148 + B3 SINE B2 2 206 -10 8 1306 194 176 20 0 chr17 94560548 94560599 -712052 + T-rich Low_complexity Low_complexity 3 54 0 8 1306 243 139 175 12 chr17 94560622 94560702 -711949 + Lx8 LINE L1 7380 7472 -1 8 1306 344 265 153 56 chr17 94560930 94561126 -711525 + B3 SINE B2 1 215 -1 8 1306 822 244 72 0 chr17 94561140 94561349 -711302 - Lx9 LINE L1 -339 7305 7082 8 1306 288 194 29 48 chr17 94561347 94561450 -711201 + Lx9 LINE L1 7544 7644 0 8 1306 849 304 10 58 chr17 94561828 94561909 -710742 - Tigger5 DNA MER2_type 0 2406 2325 8 1306 4327 44 4 0 chr17 94561909 94562431 -710220 + L1_Mus1 LINE L1 6043 6566 -1 8 1306 849 304 10 58 chr17 94562431 94562642 -710009 - Tigger5 DNA MER2_type -82 2324 2128 8 1306 2635 54 0 3 chr17 94563224 94563561 -709090 + L1Md_F2 LINE L1 6247 6582 0 8 1306 251 371 113 113 chr17 94564115 94564477 -708174 - MLT1F2 LTR MaLR -176 384 23 8 1306 238 19 91 18 chr17 94565213 94565268 -707383 + (TAAAA)n Simple_repeat Simple_repeat 2 60 0 9 1306 265 233 150 0 chr17 94565420 94565540 -707111 - Lx7 LINE L1 0 7696 7559 9 1306 214 275 56 42 chr17 94566255 94566327 -706324 + MIRm SINE MIR 171 243 -33 9 1306 2044 221 68 9 chr17 94566994 94567152 -705499 + Lx5 LINE L1 6567 6724 -326 9 1306 528 45 0 0 chr17 94567152 94567219 -705432 + (CA)n Simple_repeat Simple_repeat 2 68 0 9 1306 2044 221 68 9 chr17 94567219 94567517 -705134 + Lx5 LINE L1 6725 7049 -1 9 1306 303 28 0 0 chr17 94567518 94567554 -705097 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 9 1306 2165 91 3 21 chr17 94568484 94568809 -703842 + L1_Mus2 LINE L1 6245 6563 -3 9 1306 3491 51 22 15 chr17 94571190 94571691 -700960 - L1Md_F3 LINE L1 0 6584 6122 9 1306 231 343 107 51 chr17 94572971 94573149 -699502 - MTD LTR MaLR -3 416 229 9 1306 633 314 39 5 chr17 94573172 94573380 -699271 + ID_B1 SINE B4 2 216 -8 9 1306 22 56 0 0 chr17 94573385 94573421 -699230 + AT_rich Low_complexity Low_complexity 1 36 0 1 1306 342 0 0 0 chr17 94574156 94574194 -698457 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1306 1520 109 132 4 chr17 94575562 94575811 -696840 - Lx2 LINE L1 0 6997 6717 1 1306 315 68 0 22 chr17 94575811 94575856 -696795 + Lx LINE L1 5971 6014 -640 1 1306 227 269 57 52 chr17 94576228 94576420 -696231 + L1MEd LINE L1 896 1088 -5031 1 1306 3152 49 0 0 chr17 94576735 94577122 -695529 - MTA_Mm LTR MaLR -7 389 3 1 1306 363 279 39 0 chr17 94577252 94577356 -695295 - L1MA6 LINE L1 -80 6220 6113 1 1306 2803 50 0 0 chr17 94577680 94578022 -694629 - L1_Mus1 LINE L1 -14 6553 6212 1 1306 23 86 0 0 chr17 94578412 94578470 -694181 + AT_rich Low_complexity Low_complexity 1 58 0 1 1306 522 236 75 146 chr17 94578964 94579177 -693474 + B3A SINE B2 1 198 0 1 1306 1238 159 5 10 chr17 94579421 94579630 -693021 + URR1B DNA MER1_type 2 209 -16 1 1306 219 241 0 17 chr17 94579703 94579762 -692889 + (ATG)n Simple_repeat Simple_repeat 3 60 0 1 1306 437 306 29 7 chr17 94580465 94580603 -692048 - RMER5 LTR ERV1 0 534 394 1 1306 184 120 20 20 chr17 94580620 94580671 -691980 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 1 1306 1068 109 0 0 chr17 94580688 94580835 -691816 - B1_Mus1 SINE Alu 0 148 2 1 1306 894 287 61 38 chr17 94580839 94581183 -691468 - RMER5 LTR ERV1 -140 394 43 1 1306 246 315 146 18 chr17 94581847 94581957 -690694 + B4A SINE B4 11 134 -158 1 1306 324 0 0 0 chr17 94582079 94582115 -690536 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1306 918 122 0 0 chr17 94582115 94582295 -690356 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 1306 2700 72 0 43 chr17 94582302 94582677 -689974 + RLTR10D LTR ERVK 1 359 0 1 1306 744 50 0 0 chr17 94582679 94582780 -689871 + (GA)n Simple_repeat Simple_repeat 2 102 0 1 1306 300 70 0 0 chr17 94582865 94582908 -689743 + (TTG)n Simple_repeat Simple_repeat 1 43 0 1 1306 12822 81 2 4 chr17 94583524 94585939 -686712 - L1Md_F2 LINE L1 0 6582 4174 1 1306 13716 91 2 0 chr17 94585948 94588298 -684353 - L1Md_F2 LINE L1 -2787 3096 742 1 1306 506 246 0 0 chr17 94588309 94588423 -684228 - L1Md_F2 LINE L1 -5992 624 511 1 1306 456 174 217 0 chr17 94589452 94589544 -683107 - MTC LTR MaLR -309 112 1 1 1306 378 0 0 0 chr17 94589705 94589747 -682904 + (T)n Simple_repeat Simple_repeat 1 42 0 1 1306 380 344 0 0 chr17 94589937 94590100 -682551 + ALINE LINE RTE 173 335 -282 1 1306 22 0 0 0 chr17 94590150 94590172 -682479 + AT_rich Low_complexity Low_complexity 1 22 0 1 1306 311 338 132 28 chr17 94591464 94591677 -680974 - L2a LINE L2 -23 3403 3169 1 1306 315 411 24 24 chr17 94591974 94592221 -680430 - L2a LINE L2 -764 2655 2409 1 1306 536 276 52 35 chr17 94592221 94592255 -680396 + ID_B1 SINE B4 42 217 -7 1 1306 985 115 0 0 chr17 94592255 94592394 -680257 + B1_Mm SINE Alu 2 140 -7 1 1306 1239 88 0 0 chr17 94592410 94592628 -680023 + (TA)n Simple_repeat Simple_repeat 1 218 0 1 1306 504 32 0 0 chr17 94593693 94593755 -678896 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 1306 1530 273 15 26 chr17 94593952 94594348 -678303 - MTE2b LTR MaLR 0 419 28 1 1306 27 29 0 0 chr17 94594495 94594529 -678122 + AT_rich Low_complexity Low_complexity 1 34 0 1 1306 3197 104 6 45 chr17 94594657 94595151 -677500 + MT2C_Mm LTR ERVL 1 475 0 1 1306 303 36 71 0 chr17 94595260 94595316 -677335 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 1 1306 212 158 0 0 chr17 94595340 94595378 -677273 + (CAGAGA)n Simple_repeat Simple_repeat 6 43 0 1 1306 1730 313 94 18 chr17 94595564 94596224 -676427 + Lx8 LINE L1 6514 7223 -250 1 1306 394 65 32 0 chr17 94596269 94596331 -676320 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 1306 1135 70 0 0 chr17 94596331 94596473 -676178 - B1_Mus1 SINE Alu -5 143 2 1 1306 2693 80 3 11 chr17 94597990 94598368 -674283 + MTA_Mm LTR MaLR 1 375 -21 1 1306 1202 286 98 83 chr17 94598697 94598885 -673766 - RMER5 LTR ERV1 0 534 330 1 1306 1046 83 14 0 chr17 94598885 94599030 -673621 + B1_Mus2 SINE Alu 1 147 0 1 1306 225 24 71 0 chr17 94599040 94599082 -673569 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 1 1306 1202 286 98 83 chr17 94599082 94599400 -673251 - RMER5 LTR ERV1 -205 329 9 1 1306 522 309 75 33 chr17 94599694 94599908 -672743 - RMER15 LTR ERVL -13 562 340 1 1306 601 328 46 34 chr17 94600293 94600369 -672282 + B4A SINE B4 6 80 -212 1 1306 3433 20 5 0 chr17 94600369 94600763 -671888 - MTA_Mm LTR MaLR 0 396 1 1 1306 601 328 46 34 chr17 94600763 94600948 -671703 + B4A SINE B4 81 270 -22 1 1306 528 16 0 0 chr17 94600956 94601017 -671634 + (TC)n Simple_repeat Simple_repeat 1 61 0 1 1306 360 0 0 0 chr17 94601017 94601057 -671594 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1306 509 135 11 0 chr17 94601057 94601146 -671505 + (GA)n Simple_repeat Simple_repeat 1 90 0 1 1306 541 286 22 28 chr17 94601288 94601468 -671183 + B3A SINE B2 4 182 -16 1 1306 1089 96 0 7 chr17 94602489 94602636 -670015 + B1_Mus1 SINE Alu 1 146 -2 1 1306 248 305 118 62 chr17 94604023 94604184 -668467 - MIRb SINE MIR -30 238 69 1 1306 180 176 0 0 chr17 94604503 94604537 -668114 + A-rich Low_complexity Low_complexity 1 34 0 1 1306 283 276 38 32 chr17 94604598 94604755 -667896 - L1MA6 LINE L1 -170 6130 5973 1 1306 516 292 93 30 chr17 94605849 94606028 -666623 - L1M3e LINE L1 -6739 291 99 1 1306 549 0 0 0 chr17 94606028 94606089 -666562 + (TC)n Simple_repeat Simple_repeat 1 61 0 1 1306 516 292 93 30 chr17 94606089 94606177 -666474 - L1M3e LINE L1 -6932 98 9 1 1306 330 333 0 0 chr17 94606463 94606577 -666074 - Tigger5 DNA MER2_type -1 2405 2292 1 1306 346 353 80 11 chr17 94606609 94606784 -665867 - Tigger5 DNA MER2_type -2216 190 4 1 1306 180 0 0 0 chr17 94606943 94606963 -665688 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 1 1306 1106 68 0 20 chr17 94606963 94607112 -665539 - B1_Mm SINE Alu 0 147 2 1 1306 478 288 199 22 chr17 94607266 94607447 -665204 - MTE2a LTR MaLR -67 312 100 1 1306 327 289 115 51 chr17 94607576 94607733 -664918 + B4 SINE B4 126 292 0 1 1306 552 163 0 0 chr17 94607930 94608016 -664635 - B1F2 SINE Alu -61 88 3 1 1306 28 48 0 0 chr17 94608057 94608099 -664552 + AT_rich Low_complexity Low_complexity 1 42 0 1 1306 474 209 161 30 chr17 94608466 94608634 -664017 + L1MA4 LINE L1 5823 6012 -288 1 1306 313 143 72 72 chr17 94608693 94608776 -663875 + L1MA4 LINE L1 6203 6285 -15 1 1306 238 333 126 54 chr17 94611379 94611601 -661050 + MIRb SINE MIR 25 262 -6 1 1306 1026 87 7 0 chr17 94611719 94611857 -660794 - B1_Mus1 SINE Alu -9 139 1 1 1306 474 65 0 0 chr17 94612495 94612557 -660094 + (CATA)n Simple_repeat Simple_repeat 3 64 0 1 1306 372 333 8 8 chr17 94613059 94613180 -659471 - B4A SINE B4 -171 121 1 1 1306 457 238 37 30 chr17 94613264 94613398 -659253 + L1MC1 LINE L1 5993 6127 -206 1 1306 1409 214 144 14 chr17 94613400 94613769 -658882 + MTD LTR MaLR 3 419 0 1 1306 456 193 12 0 chr17 94614006 94614089 -658562 - B1_Mur2 SINE Alu -6 143 60 1 1306 336 167 167 0 chr17 94614102 94614168 -658483 - ID_B1 SINE B4 0 224 148 1 1306 208 143 0 0 chr17 94615020 94615055 -657596 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1 1306 351 0 0 0 chr17 94616900 94616939 -655712 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1306 637 238 39 34 chr17 94618156 94618334 -654317 - B4A SINE B4 -12 280 102 1 1306 2772 92 34 0 chr17 94618335 94618717 -653934 - MTA_Mm LTR MaLR 0 396 2 1 1306 261 0 0 0 chr17 94618816 94618845 -653806 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1306 1316 268 59 35 chr17 94618939 94619310 -653341 - Lx5 LINE L1 -3 7047 6668 1 1306 1364 295 70 12 chr17 94619315 94619799 -652852 + Lx8 LINE L1 6712 7223 -250 1 1306 586 193 46 0 chr17 94620206 94620315 -652336 + MTEa LTR MaLR 266 379 0 1 1306 1737 79 8 0 chr17 94620422 94620662 -651989 - L1_Mus3 LINE L1 -6 6632 6391 1 1306 2979 47 0 0 chr17 94620663 94621027 -651624 + L1_Mus3 LINE L1 6047 6410 -228 1 1306 407 295 111 64 chr17 94621221 94621456 -651195 - ORR1E LTR MaLR 0 359 114 1 1306 3870 55 26 0 chr17 94621467 94621957 -650694 - RLTR1C LTR ERV1 0 503 1 1 1306 431 248 20 10 chr17 94621957 94622059 -650592 - ORR1E LTR MaLR -251 108 6 1 1306 905 271 73 42 chr17 94622512 94622870 -649781 + ORR1D2 LTR MaLR 2 370 0 1 1306 207 0 0 0 chr17 94623755 94623778 -648873 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1306 814 190 48 12 chr17 94623874 94624039 -648612 + B3 SINE B2 45 215 -1 1 1306 653 235 37 56 chr17 94624598 94624814 -647837 + Lx9 LINE L1 7249 7460 -184 1 1306 260 83 0 20 chr17 94624816 94624865 -647786 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1306 486 33 0 0 chr17 94624885 94624945 -647706 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 1306 180 197 70 70 chr17 94625420 94625491 -647160 + L2 LINE L2 2517 2587 -832 1 1306 365 284 22 100 chr17 94626299 94626479 -646172 - CYRA11_Mm Unknown Y-chromosome -213 404 239 1 1306 988 208 22 0 chr17 94626323 94626501 -646150 + URR1B DNA MER1_type 6 187 -38 1 1306 447 270 22 0 chr17 94626541 94626630 -646021 + B3A SINE B2 1 91 -107 1 1306 647 38 0 4 chr17 94626634 94626722 -645929 + L1_Mus2 LINE L1 6350 6470 -168 1 1306 2574 52 6 24 chr17 94626722 94627055 -645596 - IAPLTR2b LTR ERVK 0 327 1 1 1306 6326 68 11 6 chr17 94627057 94627880 -644771 - IAPEz-int LTR ERVK -2 6479 5653 1 1306 10736 63 41 33 chr17 94627875 94629353 -643298 - IAPEz-int LTR ERVK -4781 1700 211 1 1306 893 68 8 0 chr17 94629353 94629470 -643181 - IAPEz-int LTR ERVK -6196 285 168 1 1306 244 302 0 0 chr17 94629470 94629523 -643128 - RLTR27 LTR ERVK -34 275 223 1 1306 928 163 16 37 chr17 94629523 94629714 -642937 - IAPEz-int LTR ERVK -6286 195 9 1 1306 2701 40 0 21 chr17 94629715 94630049 -642602 - IAPLTR2b LTR ERVK 0 327 1 1 1306 1046 75 44 0 chr17 94630049 94630209 -642442 + L1_Mus3 LINE L1 6465 6631 -7 1 1306 836 69 9 0 chr17 94630377 94630493 -642158 + (TC)n Simple_repeat Simple_repeat 1 117 0 1 1306 627 254 16 71 chr17 94630636 94630818 -641833 - B4 SINE B4 -3 289 118 1 1306 501 269 20 82 chr17 94631005 94631151 -641500 - B4 SINE B4 -147 145 9 1 1306 305 246 0 0 chr17 94631155 94631224 -641427 + MLT1A1 LTR MaLR 340 408 0 1 1306 199 297 203 0 chr17 94631485 94631559 -641092 + L2a LINE L2 3317 3405 -21 2 1306 222 180 0 0 chr17 94632194 94632255 -640396 + T-rich Low_complexity Low_complexity 1 61 0 2 1306 23 0 0 0 chr17 94632275 94632298 -640353 + AT_rich Low_complexity Low_complexity 1 23 0 2 1306 6300 55 18 4 chr17 94632298 94632313 -640338 - L1_Mus1 LINE L1 0 6567 6553 2 1306 3018 64 13 8 chr17 94632313 94632707 -639944 - MTA_Mm LTR MaLR 0 396 1 2 1306 6300 55 18 4 chr17 94632707 94633493 -639158 - L1_Mus1 LINE L1 -15 6552 5755 2 1307 234 299 104 0 chr17 94634044 94634111 -638540 + ORR1E LTR MaLR 272 345 -14 2 1307 281 254 43 87 chr17 94634410 94634616 -638035 + RLTR20A2 LTR ERVK 48 239 -339 2 1307 293 342 144 44 chr17 94634774 94634825 -637826 - MLT1A LTR MaLR -122 252 179 2 1307 432 0 0 0 chr17 94634825 94634873 -637778 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1307 293 342 144 44 chr17 94634873 94635050 -637601 - MLT1A LTR MaLR -196 178 1 2 1307 242 321 160 36 chr17 94635996 94636190 -636461 - MIRc SINE MIR -17 251 34 2 1307 411 21 0 0 chr17 94636297 94636345 -636306 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1307 253 359 29 0 chr17 94637155 94637258 -635393 - MER5A DNA MER1_type 0 189 84 2 1307 1985 197 100 48 chr17 94638278 94638780 -633871 + RLTR24 LTR ERV1 2 529 0 2 1307 481 200 32 38 chr17 94639295 94639427 -633224 + L1MB5 LINE L1 5007 5140 -1006 2 1307 327 260 97 37 chr17 94639583 94639748 -632903 + L1MB5 LINE L1 5299 5472 -708 2 1307 1649 246 122 8 chr17 94639910 94640534 -632117 + L1_Mur3 LINE L1 4037 4731 -1149 2 1307 436 340 122 52 chr17 94640543 94640962 -631689 + Lx8 LINE L1 7023 7470 -3 2 1307 793 314 59 85 chr17 94640978 94641591 -631060 + L1MB5 LINE L1 5491 6087 -87 2 1307 370 175 0 0 chr17 94641603 94641660 -630991 + Lx2 LINE L1 6556 6612 -385 2 1307 817 297 60 25 chr17 94643215 94643498 -629153 + L4 LINE RTE 898 1190 -839 2 1307 209 271 0 0 chr17 94643596 94643644 -629007 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1307 21 36 0 0 chr17 94644170 94644198 -628453 + AT_rich Low_complexity Low_complexity 1 28 0 2 1307 456 280 29 20 chr17 94644233 94644335 -628316 - RSINE1 SINE B4 -61 104 2 2 1307 3871 58 0 6 chr17 94644373 94644863 -627788 + L1Md_F2 LINE L1 5100 5586 -297 2 1307 7932 52 0 7 chr17 94644863 94645864 -626787 + L1Md_F2 LINE L1 5587 6580 -2 2 1307 945 281 66 68 chr17 94645865 94646136 -626515 + RCHARR1 DNA MER1_type 70 339 -635 2 1307 480 271 115 33 chr17 94646136 94646319 -626332 - B3A SINE B2 0 198 1 2 1307 945 281 66 68 chr17 94646319 94646474 -626177 + RCHARR1 DNA MER1_type 340 494 -480 2 1307 521 304 7 7 chr17 94646476 94646622 -626029 + RSINE1 SINE B4 3 148 -17 2 1307 492 18 0 0 chr17 94646647 94646704 -625947 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1307 1450 247 64 40 chr17 94646736 94647208 -625443 + RCHARR1 DNA MER1_type 491 973 -1 2 1307 184 129 32 0 chr17 94647269 94647300 -625351 + MIRc SINE MIR 115 146 -122 2 1307 300 333 17 14 chr17 94647333 94647445 -625206 - B1_Mus1 SINE Alu -1 119 7 2 1307 737 249 116 42 chr17 94647672 94647971 -624680 - L1MA4A LINE L1 -408 5895 5571 2 1307 3379 121 35 9 chr17 94647971 94648514 -624137 + RLTR31B_Mm LTR ERVK 1 557 0 2 1307 737 237 250 50 chr17 94648514 94648565 -624086 - L1MA4A LINE L1 -733 5570 5505 2 1307 9388 118 9 47 chr17 94648576 94650429 -622222 - L1_Mus2 LINE L1 0 6566 4859 2 1307 5134 62 22 4 chr17 94650429 94651111 -621540 + L1Md_F2 LINE L1 5889 6582 0 2 1307 9388 165 10 87 chr17 94651111 94651982 -620669 - L1_Mus2 LINE L1 -1019 4858 3995 2 1307 2894 111 18 2 chr17 94651976 94652426 -620225 + L1_Mus2 LINE L1 3541 3997 -1886 2 1307 477 249 19 43 chr17 94652578 94652768 -619883 - L1MA4A LINE L1 -832 5314 5133 2 1307 329 346 23 0 chr17 94653272 94653402 -619249 + MIR SINE MIR 17 149 -113 2 1307 24836 148 20 7 chr17 94654688 94657050 -615601 - Lx2B LINE L1 -18 6985 4636 2 1307 209 33 33 0 chr17 94657050 94657080 -615571 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1307 24836 156 26 12 chr17 94657080 94660809 -611842 - Lx2B LINE L1 -1254 4635 712 2 1307 195 114 0 0 chr17 94661385 94661420 -611231 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 2 1307 435 304 238 97 chr17 94661898 94662371 -610280 - MLT1H LTR MaLR -9 540 1 2 1307 1739 75 67 0 chr17 94662483 94662736 -609915 + L1_Mus3 LINE L1 6366 6635 -3 2 1307 234 0 0 0 chr17 94662914 94662940 -609711 + (A)n Simple_repeat Simple_repeat 1 26 0 2 1307 1072 210 60 46 chr17 94663184 94663468 -609183 + Lx7 LINE L1 7145 7432 -264 2 1307 480 62 0 0 chr17 94663522 94663586 -609065 + (GA)n Simple_repeat Simple_repeat 1 64 0 2 1307 2591 101 62 10 chr17 94663617 94664017 -608634 + BGLII LTR ERVK 1 421 0 2 1307 275 107 36 0 chr17 94664125 94664181 -608470 + (TCTCTG)n Simple_repeat Simple_repeat 3 60 0 2 1307 300 152 0 0 chr17 94664197 94664263 -608388 + GA-rich Low_complexity Low_complexity 2 67 0 2 1307 305 103 43 14 chr17 94664589 94664658 -607993 + GA-rich Low_complexity Low_complexity 1 71 0 2 1307 402 301 40 44 chr17 94665026 94665276 -607375 + Lx7 LINE L1 5789 6037 -1659 2 1307 495 48 0 0 chr17 94665391 94665453 -607198 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 1307 425 66 16 0 chr17 94665453 94665514 -607137 + (GA)n Simple_repeat Simple_repeat 1 62 0 2 1307 880 264 47 0 chr17 94665556 94665791 -606860 + Lx8 LINE L1 6205 6450 -1023 2 1307 2991 165 6 33 chr17 94665935 94666479 -606172 - RLTR24 LTR ERV1 0 529 1 2 1307 358 274 37 19 chr17 94666522 94666630 -606021 - RLTR14 LTR ERV1 0 382 273 2 1307 225 0 0 0 chr17 94667026 94667051 -605600 + (TAA)n Simple_repeat Simple_repeat 2 26 0 2 1307 572 238 47 5 chr17 94667836 94668026 -604625 + MER33 DNA MER1_type 91 288 -36 2 1307 196 286 84 14 chr17 94668061 94668132 -604519 + MIRb SINE MIR 117 192 -76 2 1307 497 331 39 28 chr17 94668640 94668820 -603831 + B4A SINE B4 2 183 -109 2 1307 555 16 0 0 chr17 94669585 94669649 -603002 + (TC)n Simple_repeat Simple_repeat 1 64 0 2 1307 357 24 0 0 chr17 94669891 94669933 -602718 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1307 450 284 25 43 chr17 94670003 94670039 -602612 + RLTR11B LTR ERVK 173 208 -245 2 1307 258 32 0 0 chr17 94670039 94670070 -602581 + (GA)n Simple_repeat Simple_repeat 2 32 0 2 1307 450 284 25 43 chr17 94670070 94670082 -602569 + RLTR11B LTR ERVK 209 222 -231 2 1307 1210 64 0 13 chr17 94670082 94670321 -602330 + (GAA)n Simple_repeat Simple_repeat 1 235 0 2 1307 450 311 25 33 chr17 94670321 94670501 -602150 + RLTR11B LTR ERVK 223 412 -29 2 1307 23 0 0 0 chr17 94671038 94671061 -601590 + AT_rich Low_complexity Low_complexity 1 23 0 2 1307 398 273 38 30 chr17 94671064 94671319 -601332 - L1MA5 LINE L1 -6 6291 6024 2 1307 198 71 0 0 chr17 94672767 94672795 -599856 + (CAG)n Simple_repeat Simple_repeat 3 30 0 2 1307 478 305 32 25 chr17 94672939 94673097 -599554 - RLTR14 LTR ERV1 0 382 224 2 1307 473 331 74 49 chr17 94673320 94673644 -599007 - RLTR14-int LTR ERV1 -5 5312 4981 2 1307 385 311 49 18 chr17 94674163 94674417 -598234 - RLTR14-int LTR ERV1 -2671 2392 2262 2 1307 365 379 8 8 chr17 94674483 94674720 -597931 - RLTR14-int LTR ERV1 -3319 1998 1762 2 1307 416 262 93 40 chr17 94677231 94677382 -595269 - RLTR14 LTR ERV1 0 382 224 2 1307 298 258 211 0 chr17 94677650 94677778 -594873 + MamRep564 Unknown Unknown 42 196 -161 2 1307 429 144 0 0 chr17 94678275 94678365 -594286 + (TA)n Simple_repeat Simple_repeat 2 91 0 2 1307 740 273 205 13 chr17 94678502 94678736 -593915 - B4A SINE B4 -12 280 2 2 1307 698 272 165 43 chr17 94679654 94679908 -592743 - B4A SINE B4 -7 285 1 2 1307 520 329 30 37 chr17 94681795 94681959 -590692 + RSINE1 SINE B4 3 165 0 2 1307 483 277 134 7 chr17 94682605 94682754 -589897 + MLT2B2 LTR ERVL 331 498 -64 2 1307 2551 86 0 0 chr17 94683563 94683890 -588761 + ORR1A2 LTR MaLR 1 327 0 2 1307 1022 112 7 0 chr17 94683928 94684080 -588571 + URR1B DNA MER1_type 73 225 0 2 1307 596 317 39 29 chr17 94685264 94685543 -587108 + B4A SINE B4 1 282 -10 2 1307 192 315 40 27 chr17 94685709 94685784 -586867 + MIRm SINE MIR 73 148 -128 2 1307 245 262 16 0 chr17 94689592 94689653 -582998 + GA-rich Low_complexity Low_complexity 1 62 0 2 1307 1014 58 65 0 chr17 94689878 94690016 -582635 + B1_Mm SINE Alu 1 147 0 2 1307 1373 194 140 15 chr17 94690554 94690883 -581768 + ORR1D2 LTR MaLR 1 370 0 2 1307 254 50 25 0 chr17 94690962 94691002 -581649 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 2 1307 6476 72 0 0 chr17 94691389 94692309 -580342 + L1_Mus1 LINE L1 5694 6567 0 2 1307 12233 78 2 1 chr17 94693289 94695701 -576950 - L1Md_F2 LINE L1 -1 6581 4172 2 1307 2880 33 0 3 chr17 94695701 94696039 -576612 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1307 53210 21 15 4 chr17 94696039 94702446 -570205 - IAPEz-int LTR ERVK 0 6481 8 2 1307 2880 33 0 3 chr17 94702446 94702784 -569867 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1307 12158 98 4 14 chr17 94702784 94704695 -567956 - L1Md_F2 LINE L1 -1706 4177 2287 2 1307 270 119 0 0 chr17 94704683 94704725 -567926 + L1Md_F LINE L1 288 329 -6190 2 1307 32233 68 6 1 chr17 94704723 94709985 -562666 + L1Md_F2 LINE L1 301 5586 -297 2 1307 7687 60 7 2 chr17 94709985 94710976 -561675 + L1Md_F2 LINE L1 5587 6582 0 2 1307 7209 83 19 0 chr17 94710982 94712868 -559783 - L1Md_F2 LINE L1 -3575 2308 386 2 1307 349 219 83 0 chr17 94713214 94713310 -559341 + L1_Mur3 LINE L1 3696 3799 -2081 2 1307 446 295 17 43 chr17 94713312 94713546 -559105 + L1MA5A LINE L1 3913 4140 -2003 2 1307 1620 156 10 0 chr17 94713607 94713895 -558756 - Lx2B LINE L1 -945 6055 5765 2 1307 878 133 32 0 chr17 94713888 94714046 -558605 + L1_Mur2 LINE L1 4820 4982 -895 2 1307 564 295 167 24 chr17 94714051 94714190 -558461 + L1MA5A LINE L1 4526 4704 -1439 2 1307 390 42 0 0 chr17 94714190 94714238 -558413 + (CATA)n Simple_repeat Simple_repeat 2 49 0 2 1307 852 293 131 28 chr17 94714238 94715319 -557332 + L1MA5A LINE L1 4705 5882 -415 2 1307 243 61 0 0 chr17 94715532 94715565 -557086 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 2 1307 298 302 0 0 chr17 94715567 94715653 -556998 + L1M2 LINE L1 5666 5751 -549 2 1307 234 305 93 21 chr17 94716209 94716306 -556345 + MER74C LTR ERVL 301 404 -56 2 1307 1219 60 0 6 chr17 94717273 94717440 -555211 - L1Md_F2 LINE L1 -12 6570 6405 2 1307 589 289 133 35 chr17 94717680 94717979 -554672 + MTE2b LTR MaLR 51 379 0 2 1307 21 36 0 0 chr17 94718211 94718239 -554412 + AT_rich Low_complexity Low_complexity 1 28 0 2 1307 975 306 81 53 chr17 94718661 94719513 -553138 + RMER1A Other Other 1 513 -553 2 1307 1578 190 25 40 chr17 94719513 94720017 -552634 - RMER4B LTR ERVK 0 585 17 2 1307 13020 90 27 31 chr17 94720352 94723236 -549415 - L1VL2 LINE L1 -627 2988 121 2 1307 1969 224 69 25 chr17 94723253 94723772 -548879 + RMER1B Other Other 381 1066 0 2 1307 232 323 63 63 chr17 94726189 94726331 -546320 - LTR33 LTR ERVL -368 147 6 2 1307 25 0 0 0 chr17 94726620 94726645 -546006 + AT_rich Low_complexity Low_complexity 1 25 0 2 1307 517 270 9 35 chr17 94726678 94726793 -545858 - RSINE1 SINE B4 -31 134 23 3 1307 2990 26 0 14 chr17 94727254 94727605 -545046 - ORR1A0 LTR MaLR 0 346 1 3 1307 298 329 41 14 chr17 94727839 94728058 -544593 + L1M5 LINE L1 4451 4675 -1471 3 1307 560 209 0 0 chr17 94728096 94728201 -544450 - U6 snRNA snRNA -2 105 1 3 1307 237 323 122 43 chr17 94728566 94728705 -543946 + RSINE1 SINE B4 2 151 -14 3 1307 325 317 26 57 chr17 94728690 94728884 -543767 - RLTR11A2 LTR ERVK -218 309 122 3 1307 24 53 0 0 chr17 94728920 94728958 -543693 + AT_rich Low_complexity Low_complexity 1 38 0 3 1307 398 358 25 6 chr17 94729656 94729819 -542832 - MER5A1 DNA MER1_type 0 166 1 3 1307 302 243 9 19 chr17 94730140 94730245 -542406 - Lx2A1 LINE L1 -6 7002 6899 3 1307 406 299 89 95 chr17 94730254 94730768 -541883 - RLTR11A2 LTR ERVK -16 511 1 3 1307 543 324 62 77 chr17 94730869 94731143 -541508 + B4A SINE B4 1 270 -22 3 1307 207 139 0 0 chr17 94731182 94731218 -541433 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1307 311 205 61 49 chr17 94731220 94731302 -541349 + HAL1-3A_ME LINE L1 1975 2057 -801 3 1307 589 336 65 50 chr17 94733028 94733366 -539285 + ORR1E LTR MaLR 15 357 -2 3 1307 7037 177 33 10 chr17 94733384 94734418 -538233 + Lx5 LINE L1 4875 5936 -1114 3 1307 5006 181 23 23 chr17 94734418 94735376 -537275 + RMER17B LTR ERVK 1 958 0 3 1307 7037 188 39 12 chr17 94735376 94736462 -536189 + Lx5 LINE L1 5937 7050 0 3 1307 503 268 75 75 chr17 94737394 94737537 -535114 + Lx9 LINE L1 7313 7457 -187 3 1307 423 0 0 0 chr17 94737537 94737584 -535067 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 3 1307 503 268 75 75 chr17 94737584 94737747 -534904 + Lx9 LINE L1 7458 7619 -25 3 1307 22 0 0 0 chr17 94738293 94738315 -534336 + AT_rich Low_complexity Low_complexity 1 22 0 3 1307 328 358 52 33 chr17 94738648 94738801 -533850 + ORR1D2 LTR MaLR 87 242 -128 3 1307 222 77 0 93 chr17 94738989 94739032 -533619 + C-rich Low_complexity Low_complexity 3 41 0 3 1307 205 27 0 75 chr17 94739539 94739579 -533072 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 3 1307 22 56 0 0 chr17 94740642 94740678 -531973 + AT_rich Low_complexity Low_complexity 1 36 0 3 1307 2387 94 35 0 chr17 94740967 94741309 -531342 - IAPEY2_LTR LTR ERVK 0 357 4 3 1307 5316 54 61 0 chr17 94741309 94742031 -530620 - IAPEY3-int LTR ERVK -7 7673 6908 3 1307 656 93 10 0 chr17 94742035 94742132 -530519 - IAPEY3-int LTR ERVK -4397 3283 3186 3 1307 1517 52 0 0 chr17 94742124 94742318 -530333 - IAPEY3-int LTR ERVK -2635 5045 4852 3 1307 14288 107 11 13 chr17 94742311 94744482 -528169 - IAPEY3-int LTR ERVK -4991 2689 524 3 1307 661 132 50 50 chr17 94744481 94744640 -528011 - IAPLTR4_I LTR ERVK -1290 180 22 3 1307 2469 96 3 8 chr17 94744640 94744996 -527655 - IAPEY2_LTR LTR ERVK 0 357 4 3 1307 697 292 57 0 chr17 94744996 94745166 -527485 + Tigger7 DNA MER2_type 27 207 -2284 3 1307 369 256 38 46 chr17 94745270 94745399 -527252 + MER44A DNA MER2_type 66 171 -168 3 1307 306 0 0 0 chr17 94745446 94745480 -527171 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1307 266 245 199 23 chr17 94745769 94745990 -526661 - Charlie21a DNA MER1_type -79 1134 875 3 1307 255 204 0 0 chr17 94746513 94746567 -526084 + (TATG)n Simple_repeat Simple_repeat 2 55 0 3 1307 376 300 19 0 chr17 94747338 94747494 -525157 - L1MA8 LINE L1 -281 6019 5856 3 1307 200 217 0 0 chr17 94747497 94747543 -525108 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 1307 30812 106 19 11 chr17 94747863 94751749 -520902 + L1_Mus1 LINE L1 334 4252 -1631 3 1307 3403 20 10 0 chr17 94751749 94752141 -520510 - MTA_Mm LTR MaLR 0 396 1 3 1307 30812 84 2 3 chr17 94752141 94754453 -518198 + L1_Mus1 LINE L1 4253 6560 -7 3 1307 825 56 0 0 chr17 94754453 94754560 -518091 + (GGAGA)n Simple_repeat Simple_repeat 5 111 0 3 1307 213 39 0 0 chr17 94754561 94754587 -518064 + (CAAGA)n Simple_repeat Simple_repeat 1 26 0 3 1307 820 232 4 26 chr17 94754852 94755042 -517609 - B3A SINE B2 -18 177 1 3 1307 685 328 36 110 chr17 94756344 94756789 -515862 + MLT1D LTR MaLR 94 505 0 3 1307 24 32 0 0 chr17 94756798 94756829 -515822 + AT_rich Low_complexity Low_complexity 1 31 0 3 1307 2091 164 133 21 chr17 94758036 94758509 -514142 + RLTR12B LTR ERVK 3 528 0 3 1307 350 310 69 6 chr17 94759952 94760127 -512524 - Lx8 LINE L1 -251 7222 7037 3 1307 318 284 162 8 chr17 94760318 94760540 -512111 - MLT1A1 LTR MaLR 0 408 25 3 1307 222 118 0 0 chr17 94762273 94762307 -510344 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 3 1307 24 0 0 0 chr17 94762722 94762746 -509905 + AT_rich Low_complexity Low_complexity 1 24 0 3 1307 299 322 81 0 chr17 94763562 94763649 -509002 + PB1D10 SINE Alu 21 114 -6 3 1307 498 33 0 0 chr17 94763669 94763729 -508922 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 1307 383 258 99 22 chr17 94763900 94764082 -508569 + L1MA5A LINE L1 6046 6241 -56 3 1307 524 110 12 35 chr17 94764082 94764167 -508484 - URR1B DNA MER1_type 0 225 143 3 163 15394 152 26 224 chr17 94764195 94770420 -502231 + L1_Mus3 LINE L1 529 5436 -447 3 1308 4385 68 9 0 chr17 94770420 94770978 -501673 + L1_Mus1 LINE L1 6005 6567 0 3 1308 15394 83 74 47 chr17 94770978 94771810 -500841 + L1_Mus3 LINE L1 5437 6318 -320 3 1308 738 159 61 6 chr17 94771800 94771965 -500686 + L1_Mus3 LINE L1 6444 6617 -21 3 1308 903 179 39 0 chr17 94771965 94772121 -500530 - URR1B DNA MER1_type -63 162 1 3 1308 452 276 25 134 chr17 94772163 94772480 -500171 + Lx9 LINE L1 7172 7441 -203 3 1308 329 86 17 0 chr17 94772480 94772538 -500113 + (TATG)n Simple_repeat Simple_repeat 2 60 0 3 1308 374 317 113 26 chr17 94772538 94772606 -500045 + Lx9 LINE L1 7329 7420 -53 3 1308 2654 91 46 30 chr17 94774189 94774620 -498031 + L1_Mus3 LINE L1 6201 6638 0 3 1308 3584 136 9 23 chr17 94774775 94775345 -497306 - Lx2 LINE L1 -3 6994 6433 3 1308 405 0 0 0 chr17 94775841 94775886 -496765 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1308 2146 239 57 19 chr17 94775917 94776621 -496030 - Lx7 LINE L1 -1549 4331 3601 3 1308 5867 242 74 38 chr17 94776631 94779512 -493139 + Lx7 LINE L1 4331 7321 -375 3 1308 197 188 0 0 chr17 94781304 94781336 -491315 - L3 LINE CR1 -255 4234 4203 3 1308 389 135 0 11 chr17 94781598 94781688 -490963 + (GA)n Simple_repeat Simple_repeat 2 90 0 3 1308 2287 182 2 70 chr17 94782747 94783231 -489420 - RMER1C Other Other 0 1342 892 3 1308 252 0 0 0 chr17 94783958 94783986 -488665 + (A)n Simple_repeat Simple_repeat 1 28 0 3 1308 24 32 0 0 chr17 94784037 94784068 -488583 + AT_rich Low_complexity Low_complexity 1 31 0 3 1308 387 291 101 77 chr17 94784317 94784783 -487868 - L1ME3A LINE L1 -1 6172 5696 3 1308 269 295 0 0 chr17 94785405 94785500 -487151 - L1ME3A LINE L1 -991 5155 5061 3 1308 409 210 164 30 chr17 94785674 94785804 -486847 + MT2B LTR ERVL 1 133 -451 3 1308 6562 133 16 13 chr17 94785825 94786868 -485783 - Lx LINE L1 0 6654 5609 3 1308 1185 249 91 31 chr17 94786868 94787229 -485422 + MT2B LTR ERVL 89 601 0 3 1308 1641 160 104 45 chr17 94787229 94787583 -485068 + MERVL_2A-int LTR ERVL 1 375 -5386 3 1308 2675 164 21 17 chr17 94787583 94788062 -484589 + MERVL_2A-int LTR ERVL 877 1357 -4404 3 1308 4509 67 2 2 chr17 94788115 94788698 -483953 + L1_Mus1 LINE L1 5984 6566 -1 3 1308 610 318 99 52 chr17 94788753 94789651 -483000 + L1M4c LINE L1 1756 2702 -4405 3 1308 378 340 9 0 chr17 94789651 94789757 -482894 - PB1D10 SINE Alu -10 107 1 3 1308 610 324 46 71 chr17 94789757 94790005 -482646 + L1M4c LINE L1 2304 2540 -4568 3 1308 641 153 10 0 chr17 94790086 94790184 -482467 + B3 SINE B2 1 99 -117 3 1308 228 348 152 29 chr17 94790639 94790843 -481808 - LTR86C LTR ERVL -195 426 198 3 1308 454 310 29 88 chr17 94790984 94791154 -481497 + B4A SINE B4 3 162 -130 3 1308 264 258 22 52 chr17 94791206 94791341 -481310 + L1M4c LINE L1 6133 6263 -843 3 1308 4738 60 6 28 chr17 94791390 94792027 -480624 - L1_Mus1 LINE L1 0 6567 5945 3 1308 1047 261 58 47 chr17 94793612 94794061 -478590 - MT2A LTR ERVL 0 601 1 3 1308 7691 76 2 3 chr17 94794638 94795641 -477010 + L1_Mus3 LINE L1 5625 6626 -12 3 1308 1400 241 17 108 chr17 94795821 94796286 -476365 + RLTR23 LTR ERV1 8 430 0 3 1308 180 305 81 48 chr17 94796482 94796606 -476045 - L3 LINE CR1 -2738 1751 1624 3 1308 263 240 65 74 chr17 94796637 94796745 -475906 + LTR79 LTR ERVL 372 478 -49 3 1308 1654 80 9 0 chr17 94796939 94797163 -475488 - L1_Mus1 LINE L1 0 6567 6342 3 1308 524 31 15 0 chr17 94797163 94797228 -475423 + L1_Mus1 LINE L1 6274 6339 -228 3 1308 2101 132 82 11 chr17 94798270 94798636 -474015 + ORR1B1 LTR MaLR 1 392 -2 3 1308 567 350 30 109 chr17 94798665 94798862 -473789 - MER47B DNA MER2_type -140 278 79 3 1308 545 295 121 0 chr17 94798862 94799052 -473599 + ID_B1 SINE B4 2 214 -10 3 1308 567 350 30 109 chr17 94799052 94799156 -473495 - MER47B DNA MER2_type -340 78 1 3 1308 414 0 0 0 chr17 94799157 94799203 -473448 + (TC)n Simple_repeat Simple_repeat 1 46 0 3 1308 468 0 0 0 chr17 94799203 94799254 -473397 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1308 1011 212 108 36 chr17 94799259 94799509 -473142 - ORR1B1 LTR MaLR -86 308 41 3 1308 24 32 0 0 chr17 94800561 94800592 -472059 + AT_rich Low_complexity Low_complexity 1 31 0 3 1308 452 332 92 62 chr17 94800631 94800891 -471760 - MLT1J LTR MaLR -35 477 210 3 1308 7138 179 68 25 chr17 94801161 94801957 -470694 - Lx5 LINE L1 -5 7045 6218 3 1308 2138 95 18 21 chr17 94801957 94802289 -470362 + IAPEY3_LTR LTR ERVK 1 331 -1 3 1308 8453 168 121 10 chr17 94802289 94804296 -468355 - Lx5 LINE L1 -833 6217 3973 3 1308 2385 146 36 5 chr17 94804315 94804612 -468039 + Lx3C LINE L1 6571 6877 -99 3 1308 186 43 0 0 chr17 94804612 94804635 -468016 + (GGGGA)n Simple_repeat Simple_repeat 3 25 0 3 1308 2385 146 36 5 chr17 94804635 94804724 -467927 + Lx3C LINE L1 6878 6968 -8 3 1308 216 0 0 0 chr17 94804732 94804756 -467895 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 1308 191 62 0 59 chr17 94805686 94805720 -466931 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 3 1308 444 276 0 0 chr17 94806070 94806175 -466476 + PB1D10 SINE Alu 3 107 -10 3 1308 414 143 0 0 chr17 94806674 94806751 -465900 + (TG)n Simple_repeat Simple_repeat 2 78 0 3 1308 2625 100 22 25 chr17 94806784 94807185 -465466 + MTB LTR MaLR 1 400 0 3 1308 22 35 0 0 chr17 94807252 94807281 -465370 + AT_rich Low_complexity Low_complexity 1 29 0 3 1308 547 317 134 5 chr17 94807661 94808072 -464579 - MLT1D LTR MaLR 0 505 18 3 1308 195 45 43 43 chr17 94808408 94808454 -464197 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 3 1308 327 305 86 0 chr17 94809008 94809136 -463515 - MLT1B LTR MaLR -7 383 245 3 1308 252 0 0 0 chr17 94809819 94809847 -462804 + (A)n Simple_repeat Simple_repeat 1 28 0 3 1308 22 0 0 0 chr17 94810651 94810673 -461978 + AT_rich Low_complexity Low_complexity 1 22 0 4 1308 261 0 0 0 chr17 94810988 94811017 -461634 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1308 228 250 29 0 chr17 94811982 94812050 -460601 + L1MEd LINE L1 40 109 -6010 4 1308 1027 107 0 0 chr17 94812565 94812705 -459946 + B1_Mus1 SINE Alu 1 140 -8 4 1308 714 89 0 0 chr17 94812708 94812820 -459831 + (GA)n Simple_repeat Simple_repeat 1 112 0 4 1308 339 343 66 49 chr17 94813537 94813811 -458840 + L2a LINE L2 3109 3426 0 4 1308 21 0 0 0 chr17 94813932 94813953 -458698 + AT_rich Low_complexity Low_complexity 1 21 0 4 1308 1080 280 24 45 chr17 94814028 94814316 -458335 - B4 SINE B4 -1 291 10 4 1308 180 309 36 0 chr17 94815468 94815523 -457128 + L3 LINE CR1 2257 2313 -2176 4 1308 526 379 40 48 chr17 94815929 94816281 -456370 + MLT1A0 LTR MaLR 10 358 -7 4 1308 272 328 0 15 chr17 94817288 94817356 -455295 + ID4 SINE ID 14 80 -3 4 1308 396 59 0 0 chr17 94817509 94817560 -455091 + (TTTC)n Simple_repeat Simple_repeat 2 52 0 4 1308 323 244 56 0 chr17 94817744 94817834 -454817 + MamRep1879 DNA hAT? 57 151 -65 4 1308 196 288 35 70 chr17 94818333 94818419 -454232 + MIR SINE MIR 40 122 -140 4 1308 195 42 0 0 chr17 94818422 94818446 -454205 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 4 1308 695 347 68 41 chr17 94818482 94818580 -454071 + MER44B DNA MER2_type 10 103 -447 4 1308 357 82 0 0 chr17 94818580 94818629 -454022 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1308 695 347 68 41 chr17 94818629 94818870 -453781 + MER44B DNA MER2_type 104 358 -192 4 1308 693 274 24 101 chr17 94818908 94818999 -453652 + Tigger7 DNA MER2_type 2255 2330 -161 4 1308 523 106 0 0 chr17 94818999 94819084 -453567 - L1_Mus4 LINE L1 -6 6630 6546 4 1308 693 274 24 101 chr17 94819084 94819240 -453411 + Tigger7 DNA MER2_type 2331 2483 -8 4 1308 336 48 0 0 chr17 94819376 94819418 -453233 + (CAGG)n Simple_repeat Simple_repeat 1 42 0 4 1308 601 289 20 10 chr17 94821320 94821523 -451128 + L1MA6 LINE L1 6093 6297 -3 4 1308 2785 178 77 2 chr17 94821559 94822094 -450557 - RMER15 LTR ERVL 0 575 1 4 1308 29 98 0 0 chr17 94822121 94822213 -450438 + AT_rich Low_complexity Low_complexity 1 92 0 4 1308 216 111 0 0 chr17 94823145 94823181 -449470 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1308 22 0 0 0 chr17 94823619 94823641 -449010 + AT_rich Low_complexity Low_complexity 1 22 0 4 1308 23 78 0 0 chr17 94823664 94823715 -448936 + AT_rich Low_complexity Low_complexity 1 51 0 4 1308 246 329 88 18 chr17 94823929 94824099 -448552 - MIRb SINE MIR -32 236 55 4 1308 635 309 84 11 chr17 94824218 94824480 -448171 - L1MB1 LINE L1 -123 6066 5786 4 1308 680 277 33 28 chr17 94824485 94824667 -447984 + Tigger5 DNA MER2_type 9 191 -2215 4 1308 258 167 37 0 chr17 94824830 94824884 -447767 - MTD LTR MaLR 0 419 364 4 1308 1555 246 43 17 chr17 94824950 94825301 -447350 - MTD LTR MaLR -37 382 23 4 1308 362 278 19 0 chr17 94825311 94825419 -447232 + L1MB1 LINE L1 6054 6163 -26 4 1308 453 50 0 0 chr17 94825438 94825498 -447153 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 1308 224 205 0 0 chr17 94825856 94825895 -446756 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1308 651 24 0 0 chr17 94825912 94825994 -446657 + L1_Mus2 LINE L1 6483 6564 -2 4 1308 310 103 17 0 chr17 94826006 94826064 -446587 + L1_Mur3 LINE L1 4099 4157 -1723 4 1308 1052 92 0 0 chr17 94826521 94826663 -445988 + B1_Mus2 SINE Alu 6 147 0 4 1308 1046 346 80 12 chr17 94826998 94827572 -445079 + Lx8 LINE L1 6706 7318 -155 4 1308 278 288 39 17 chr17 94828518 94828698 -443953 + L1M2 LINE L1 1695 1878 -4971 4 1308 252 318 7 83 chr17 94828962 94829106 -443545 + RMER4B LTR ERVK 57 189 -396 4 1308 1804 161 123 3 chr17 94829220 94829544 -443107 - MTC LTR MaLR -58 363 1 4 1308 5732 175 74 72 chr17 94829544 94830400 -442251 - MTC-int LTR MaLR 0 1258 384 4 1308 4885 109 20 7 chr17 94830400 94831111 -441540 - Lx2 LINE L1 0 6997 6278 4 1308 5732 175 74 72 chr17 94831111 94831510 -441141 - MTC-int LTR MaLR -875 383 1 4 1308 1427 219 25 14 chr17 94831510 94831792 -440859 - MTC LTR MaLR 0 421 137 4 1308 1888 58 4 0 chr17 94831794 94832036 -440615 + L1Md_T LINE L1 6339 6581 -1 4 1308 324 103 0 0 chr17 94832068 94832126 -440525 + (A)n Simple_repeat Simple_repeat 1 58 0 4 1308 671 124 0 0 chr17 94832126 94832223 -440428 - MTC LTR MaLR -301 120 24 4 1308 616 335 18 63 chr17 94832345 94832568 -440083 + MER44B DNA MER2_type 55 267 -283 4 1308 299 264 21 65 chr17 94832574 94832667 -439984 + MER44B DNA MER2_type 461 549 -1 4 1308 7398 49 10 4 chr17 94834095 94835063 -437588 - L1Md_F2 LINE L1 -12 6570 5597 4 1308 200 184 0 39 chr17 94835771 94835822 -436829 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 1308 505 344 50 12 chr17 94836131 94836390 -436261 - RMER5 LTR ERV1 -30 504 236 4 1308 999 242 10 5 chr17 94836407 94836606 -436045 - MTE2a LTR MaLR -179 200 1 4 1308 278 327 108 36 chr17 94836628 94836739 -435912 - MER115 DNA Tip100 -137 556 438 4 1308 302 312 13 25 chr17 94838271 94838350 -434301 + ID2 SINE ID 4 81 -2 4 1308 977 263 43 78 chr17 94838413 94838581 -434070 + RLTR14 LTR ERV1 1 152 -230 4 1308 3036 76 13 0 chr17 94838581 94838976 -433675 - MTB LTR MaLR 0 400 1 4 1308 977 263 43 78 chr17 94838976 94839203 -433448 + RLTR14 LTR ERV1 153 382 0 4 1308 1596 31 0 0 chr17 94839243 94839434 -433217 - ORR1A0 LTR MaLR 0 346 156 4 1308 11688 53 13 8 chr17 94839431 94840999 -431652 - ORR1A0-int LTR MaLR -217 1575 1 4 1308 3042 26 0 0 chr17 94840999 94841345 -431306 - ORR1A0 LTR MaLR 0 346 1 4 1308 521 315 77 57 chr17 94841354 94841707 -430944 + RLTR14-int LTR ERV1 58 417 -4900 4 1308 230 164 0 18 chr17 94842250 94842306 -430345 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 1308 280 192 11 103 chr17 94842402 94842489 -430162 + RLTR14-int LTR ERV1 823 901 -4416 4 1308 658 0 0 24 chr17 94842510 94842594 -430057 + (TTTTG)n Simple_repeat Simple_repeat 2 83 0 4 1308 1030 116 0 0 chr17 94842594 94842732 -429919 - B1_Mus1 SINE Alu -10 138 1 4 1308 604 0 13 13 chr17 94842846 94842923 -429728 + (TTTTTG)n Simple_repeat Simple_repeat 2 78 0 4 1308 3730 60 11 0 chr17 94843002 94843471 -429180 - L1_Mus1 LINE L1 -1 6566 6093 4 1308 253 366 8 8 chr17 94843934 94844058 -428593 + MMERGLN-int LTR ERV1 3668 3791 -3765 4 1308 497 221 138 0 chr17 94844507 94844652 -427999 + L1MCa LINE L1 551 715 -5793 4 1308 330 91 0 0 chr17 94845325 94845380 -427271 + (T)n Simple_repeat Simple_repeat 1 55 0 4 1308 916 234 111 58 chr17 94846033 94846483 -426168 + L1MCa LINE L1 1031 1504 -5004 4 1308 520 209 198 5 chr17 94846515 94846717 -425934 + L1MCa LINE L1 1603 1843 -4665 4 1308 281 283 35 74 chr17 94846979 94847150 -425501 + RMER15 LTR ERVL 88 373 -202 4 1308 573 216 42 20 chr17 94847218 94847445 -425206 + L1MCa LINE L1 1830 2102 -4406 4 1308 318 278 59 59 chr17 94847449 94847602 -425049 + L1MCa LINE L1 2065 2217 -4185 4 1308 272 266 154 23 chr17 94847612 94847740 -424911 + B3A SINE B2 30 182 -16 4 1308 417 180 0 0 chr17 94847743 94847832 -424819 + (CA)n Simple_repeat Simple_repeat 2 90 0 4 1308 258 241 81 50 chr17 94847842 94848100 -424551 + L1MCa LINE L1 2202 2467 -3935 4 1308 488 104 0 20 chr17 94848276 94848374 -424277 - Lx3_Mus LINE L1 0 7009 6914 4 1308 425 313 10 10 chr17 94848582 94848779 -423872 + L1VL4 LINE L1 134 330 -5972 4 1308 842 154 16 49 chr17 94848800 94848984 -423667 + L1VL4 LINE L1 465 642 -5660 4 1308 5300 103 42 20 chr17 94848982 94850030 -422621 + L1_Mm LINE L1 2028 3366 -2517 4 1308 1919 154 83 13 chr17 94850030 94850404 -422247 + RLTR9D LTR ERVK 1 400 -3 4 1308 4978 140 231 34 chr17 94850404 94850674 -421977 + L1_Mm LINE L1 3367 3606 -2277 4 1308 3331 115 2 2 chr17 94850674 94851189 -421462 + L1_Mm LINE L1 5284 5798 -85 4 1308 433 158 21 21 chr17 94851185 94851282 -421369 + L1_Mus3 LINE L1 6476 6572 -66 4 1308 4619 68 4 0 chr17 94851285 94852344 -420307 + L1Md_Gf LINE L1 716 1875 -4011 4 1308 324 206 222 27 chr17 94852343 94852528 -420123 + Lx9 LINE L1 7384 7604 -40 4 1308 649 301 6 0 chr17 94852847 94853010 -419641 - B3A SINE B2 -34 164 1 4 1308 1245 115 22 0 chr17 94853777 94853960 -418691 + B2_Mm2 SINE B2 3 189 -6 4 1308 189 0 0 0 chr17 94854080 94854101 -418550 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 4 1308 505 320 65 0 chr17 94854553 94854706 -417945 + RSINE1 SINE B4 3 165 0 4 1308 1139 12 36 12 chr17 94854713 94854879 -417772 + (TAGA)n Simple_repeat Simple_repeat 3 172 0 4 1308 516 103 28 0 chr17 94854908 94855015 -417636 + (TAGA)n Simple_repeat Simple_repeat 4 113 0 4 1308 591 89 52 29 chr17 94855053 94855226 -417425 + (TAGA)n Simple_repeat Simple_repeat 4 180 0 4 1308 417 115 56 31 chr17 94855273 94855435 -417216 + (TAGA)n Simple_repeat Simple_repeat 4 169 0 4 1308 442 102 53 33 chr17 94855473 94855625 -417026 + (TAGA)n Simple_repeat Simple_repeat 4 158 0 4 1308 400 340 142 65 chr17 94856385 94856737 -415914 - MLT1A1 LTR MaLR -4 404 26 4 1308 1128 75 7 0 chr17 94856888 94857034 -415617 + B1_Mus1 SINE Alu 2 148 0 4 1308 228 67 0 0 chr17 94857037 94857067 -415584 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1308 31723 82 3 6 chr17 94857167 94862533 -410118 + L1Md_F3 LINE L1 234 5585 -298 4 1308 7935 35 29 4 chr17 94862534 94863508 -409143 + L1Md_F3 LINE L1 5587 6584 0 4 1308 267 296 14 14 chr17 94863736 94863808 -408843 - ID_B1 SINE B4 -75 149 78 4 1308 7278 200 196 60 chr17 94863808 94864769 -407882 + Lx9 LINE L1 2393 3370 -2477 4 1308 607 73 439 0 chr17 94864769 94864892 -407759 + B2_Mm2 SINE B2 5 181 -14 4 1308 3365 53 2 0 chr17 94864892 94865308 -407343 + L1_Mus1 LINE L1 6151 6567 0 4 1308 7278 200 196 60 chr17 94865308 94867327 -405324 + Lx9 LINE L1 3371 5771 -76 4 1308 180 77 0 0 chr17 94867327 94867353 -405298 + (TAAG)n Simple_repeat Simple_repeat 2 27 0 4 1308 7278 202 137 37 chr17 94867353 94867459 -405192 + Lx9 LINE L1 5772 5930 -1714 4 1308 575 201 209 0 chr17 94867460 94867599 -405052 + RLTR11A LTR ERVK 3 170 -358 4 1308 334 339 9 0 chr17 94868251 94868363 -404288 + PB1D10 SINE Alu 1 113 -4 4 1308 852 303 65 4 chr17 94868370 94868645 -404006 + B4A SINE B4 1 292 0 4 1308 1081 208 40 52 chr17 94870125 94870468 -402183 - RLTR20A LTR ERVK -50 527 29 4 1308 544 286 92 17 chr17 94870851 94871032 -401619 - MTEa LTR MaLR -11 368 152 4 1308 1982 144 19 3 chr17 94871071 94871385 -401266 + ORR1A4 LTR MaLR 3 321 -8 4 1308 444 300 93 20 chr17 94871391 94871595 -401056 + MER34A1 LTR ERV1 300 518 -69 4 1308 1489 242 23 47 chr17 94871624 94872110 -400541 + Lx9 LINE L1 7171 7644 0 4 1308 519 291 30 0 chr17 94872271 94872405 -400246 + B1F SINE Alu 2 139 -10 4 1308 238 286 129 0 chr17 94872415 94872485 -400166 + ID4 SINE ID 2 80 -3 4 1308 321 211 0 31 chr17 94872708 94872806 -399845 + GA-rich Low_complexity Low_complexity 2 96 0 4 1308 1396 72 33 0 chr17 94873321 94873502 -399149 - B2_Mm2 SINE B2 -7 188 2 4 1308 1107 271 135 36 chr17 94873533 94874001 -398650 + Lx8 LINE L1 6949 7462 -11 4 1308 1536 231 65 3 chr17 94874218 94874539 -398112 - MTEb LTR MaLR -38 341 1 4 1308 376 219 230 7 chr17 94875278 94875430 -397221 - Lx8 LINE L1 -6 7467 7282 4 1308 1599 168 9 109 chr17 94875432 94875920 -396731 - RMER17C LTR ERVK -519 439 19 4 1308 801 262 75 19 chr17 94875930 94875956 -396695 - Lx8 LINE L1 -196 7277 7252 4 1308 2603 124 31 55 chr17 94875956 94876433 -396218 - RMER4A LTR ERVK 0 466 1 4 1308 801 262 75 19 chr17 94876433 94876674 -395977 - Lx8 LINE L1 -222 7251 6996 4 1308 321 283 38 0 chr17 94876693 94876799 -395852 - Lx8 LINE L1 -541 6932 6823 4 1308 195 42 0 0 chr17 94877245 94877269 -395382 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 5 1308 414 291 0 0 chr17 94877277 94877363 -395288 - RSINE1 SINE B4 -18 147 62 5 1308 4730 185 64 34 chr17 94877651 94878739 -393912 + Lx5 LINE L1 5925 7045 -5 5 1308 513 68 0 0 chr17 94879878 94879952 -392699 + (ATTG)n Simple_repeat Simple_repeat 2 75 0 5 1308 423 238 59 0 chr17 94879952 94880053 -392598 - PB1D10 SINE Alu -10 107 1 5 1308 942 287 57 112 chr17 94880185 94880223 -392428 - MTEa LTR MaLR 0 379 342 5 1308 264 30 0 0 chr17 94880223 94880256 -392395 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 5 1308 942 287 57 112 chr17 94880256 94880519 -392132 - MTEa LTR MaLR -38 341 100 5 1308 571 314 5 11 chr17 94880519 94880709 -391942 + B3A SINE B2 5 193 -5 5 1308 942 287 57 112 chr17 94880709 94880807 -391844 - MTEa LTR MaLR -280 99 1 5 1308 650 269 54 0 chr17 94880810 94880996 -391655 - MTEa-int LTR MaLR -3 1577 1382 5 1308 5270 95 34 7 chr17 94880997 94881770 -390881 - L1_Mus4 LINE L1 0 6636 5843 5 1308 2333 125 0 0 chr17 94881770 94882122 -390529 + L1_Mus4 LINE L1 5469 5820 -63 5 1308 1170 274 122 8 chr17 94882122 94882482 -390169 - MTEa-int LTR MaLR -182 1398 998 5 1308 10398 13 0 1 chr17 94882490 94884450 -388201 - L1Md_T LINE L1 0 6582 4626 5 1308 497 279 227 0 chr17 94884457 94884629 -388022 - MTEa-int LTR MaLR -595 985 775 5 1308 200 213 0 0 chr17 94884707 94884754 -387897 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 5 1308 768 22 0 0 chr17 94884997 94885087 -387564 + (GAA)n Simple_repeat Simple_repeat 3 92 0 5 1308 803 266 100 28 chr17 94885512 94885871 -386780 - Lx8 LINE L1 0 7473 7089 5 1308 2329 88 13 0 chr17 94885883 94886188 -386463 + RLTR27 LTR ERVK 1 309 0 5 1308 231 61 0 0 chr17 94886200 94886233 -386418 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 1308 204 40 0 0 chr17 94886320 94886345 -386306 + (TTG)n Simple_repeat Simple_repeat 3 27 0 5 1308 1039 280 18 7 chr17 94886534 94886811 -385840 + B4A SINE B4 1 280 -12 5 1308 186 207 0 0 chr17 94886850 94886908 -385743 + GA-rich Low_complexity Low_complexity 1 58 0 5 1308 270 308 27 36 chr17 94886965 94887076 -385575 - MER44A DNA MER2_type -229 110 1 5 1308 668 288 0 14 chr17 94888639 94888787 -383864 - RSINE1 SINE B4 -12 153 8 5 1308 578 304 55 30 chr17 94889008 94889208 -383443 + B4A SINE B4 86 290 -2 5 1308 260 172 17 0 chr17 94889211 94889269 -383382 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1308 490 219 0 0 chr17 94889460 94889556 -383095 - Lx5 LINE L1 -679 6371 6276 5 1308 6927 186 120 11 chr17 94889551 94890269 -382382 - L1_Mur2 LINE L1 -2688 3192 2433 5 1308 210 71 0 0 chr17 94890269 94890297 -382354 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 1308 6927 186 120 11 chr17 94890297 94890598 -382053 - L1_Mur2 LINE L1 -3448 2432 2080 5 1308 444 37 0 0 chr17 94890598 94890652 -381999 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 1308 6927 180 158 8 chr17 94890652 94891550 -381101 - L1_Mur2 LINE L1 -3801 2079 1012 5 1308 1083 85 0 0 chr17 94892144 94892285 -380366 + B1_Mus1 SINE Alu 2 142 -6 5 1308 450 0 0 0 chr17 94892286 94892336 -380315 + (TAAA)n Simple_repeat Simple_repeat 4 53 0 5 1308 7327 56 9 0 chr17 94892340 94893771 -378880 - L1Md_F2 LINE L1 -12 6570 5124 5 1308 285 324 18 18 chr17 94893775 94893885 -378766 - Tigger15a DNA TcMar -125 590 481 5 1308 398 267 0 0 chr17 94894276 94894381 -378270 + Lx8 LINE L1 6321 6425 -1048 5 1308 385 235 8 0 chr17 94895221 94895340 -377311 - Lx9 LINE L1 -124 7520 7401 5 1308 1454 254 39 12 chr17 94895359 94895769 -376882 + Lx9 LINE L1 6975 7395 -249 5 1308 25 83 0 0 chr17 94895772 94895832 -376819 + AT_rich Low_complexity Low_complexity 1 60 0 5 1309 26 0 0 0 chr17 94897062 94897088 -375563 + AT_rich Low_complexity Low_complexity 1 26 0 5 1309 234 299 12 72 chr17 94897169 94897252 -375399 - B4 SINE B4 0 292 215 5 1309 307 314 100 17 chr17 94897309 94897429 -375222 - RSINE1 SINE B4 -24 141 12 5 1309 688 311 64 28 chr17 94897439 94897657 -374994 - B4 SINE B4 -65 227 2 5 1309 788 267 23 55 chr17 94899051 94899269 -373382 + B3A SINE B2 6 216 0 5 1309 336 211 0 0 chr17 94899335 94899411 -373240 + L1Md_A LINE L1 561 636 -5980 5 1309 3688 116 58 0 chr17 94899401 94900250 -372401 + L1Md_F LINE L1 534 1442 -4441 5 1309 31962 75 2 3 chr17 94900244 94905452 -367199 + L1Md_A LINE L1 446 5587 -296 5 1309 7591 50 29 0 chr17 94905452 94906407 -366244 + L1Md_F3 LINE L1 5588 6570 -14 5 1309 31962 76 1339 75 chr17 94906407 94908193 -364458 + L1Md_A LINE L1 5588 5594 -289 5 1309 2911 67 0 3 chr17 94908193 94908551 -364100 + IAPEY2_LTR LTR ERVK 1 357 0 5 1309 29209 76 1 76 chr17 94908551 94910937 -361714 + L1Md_F2 LINE L1 3206 5471 -412 5 1309 7519 66 17 1 chr17 94910937 94911917 -360734 + L1Md_F2 LINE L1 5587 6582 0 5 1309 29209 67 3 33 chr17 94911917 94913248 -359403 + L1Md_F2 LINE L1 5472 6559 -23 5 1309 333 0 0 0 chr17 94914296 94914333 -358318 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 1309 390 21 0 0 chr17 94914333 94914379 -358272 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1309 201 162 0 0 chr17 94914881 94914918 -357733 + A-rich Low_complexity Low_complexity 1 37 0 5 1309 472 30 15 15 chr17 94915487 94915554 -357097 + (TAA)n Simple_repeat Simple_repeat 1 67 0 5 1309 251 224 41 0 chr17 94915625 94915674 -356977 + B4A SINE B4 129 179 -113 5 1309 351 0 0 0 chr17 94915805 94915844 -356807 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1309 611 260 74 51 chr17 94916002 94916217 -356434 + ID_B1 SINE B4 4 223 -1 5 1309 267 320 0 0 chr17 94916609 94916687 -355964 + ID4 SINE ID 3 80 -3 5 1309 359 293 53 50 chr17 94917654 94918032 -354619 + L1MC1 LINE L1 5150 5529 -815 5 1309 435 252 133 0 chr17 94918033 94918176 -354475 + L1MC1 LINE L1 6085 6246 -87 5 1309 1025 292 92 39 chr17 94918254 94918582 -354069 + Lx8 LINE L1 6600 6939 -534 5 1309 465 19 0 0 chr17 94918582 94918636 -354015 + (CATA)n Simple_repeat Simple_repeat 2 55 0 5 1309 1025 292 92 39 chr17 94918636 94918663 -353988 + Lx8 LINE L1 6940 6962 -511 5 1309 551 15 15 0 chr17 94918663 94918731 -353920 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 5 1309 1025 292 92 39 chr17 94918731 94918972 -353679 + Lx8 LINE L1 6963 7229 -244 5 1309 271 350 61 44 chr17 94919662 94919958 -352693 - ERVL-E-int LTR ERVL -2417 3250 2950 5 1309 247 241 36 0 chr17 94919984 94920067 -352584 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 5 1309 473 47 16 0 chr17 94920106 94920170 -352481 + (TAGA)n Simple_repeat Simple_repeat 3 67 0 5 1309 962 188 159 8 chr17 94922542 94922799 -349852 + RCHARR1 DNA MER1_type 577 872 -102 5 1309 444 379 107 29 chr17 94923017 94923428 -349223 + L1M4b LINE L1 612 1054 -6280 5 1309 2088 241 72 29 chr17 94923477 94924170 -348481 + Lx9 LINE L1 484 1206 -6402 5 1309 272 218 11 0 chr17 94924173 94924260 -348391 + (TA)n Simple_repeat Simple_repeat 2 89 0 5 1309 564 175 115 28 chr17 94924260 94924442 -348209 + Lx9 LINE L1 1610 1807 -4040 5 1309 4049 196 77 28 chr17 94924420 94925661 -346990 + Lx9 LINE L1 2357 3658 -2189 5 1309 496 152 0 20 chr17 94925669 94925770 -346881 + GA-rich Low_complexity Low_complexity 3 101 0 5 1309 1771 125 95 0 chr17 94925770 94926065 -346586 - IAPEY2_LTR LTR ERVK 0 357 35 5 1309 322 207 0 11 chr17 94926096 94926184 -346467 + Lx9 LINE L1 3660 3746 -2101 5 1309 1161 182 185 16 chr17 94926176 94926546 -346105 + Lx9 LINE L1 7202 7634 -10 5 1309 5064 209 101 38 chr17 94926554 94927362 -345289 + Lx9 LINE L1 3738 4586 -1294 5 1309 691 11 11 11 chr17 94927362 94927451 -345200 + (TAGA)n Simple_repeat Simple_repeat 2 90 0 5 1309 5064 222 102 37 chr17 94927451 94928960 -343691 + Lx9 LINE L1 4586 6428 -1216 5 1309 3461 17 17 0 chr17 94928960 94929364 -343287 - IAPLTR2a LTR ERVK 0 411 1 5 1309 2371 211 108 67 chr17 94929364 94929849 -342802 + Lx9 LINE L1 6429 6916 -728 5 1309 950 237 52 16 chr17 94929974 94930279 -342372 - RMER17C LTR ERVK -94 316 1 5 1309 666 282 18 36 chr17 94930282 94930506 -342145 + Lx9 LINE L1 7053 7272 -372 5 1309 390 177 24 37 chr17 94930507 94930589 -342062 - ORR1B1 LTR MaLR -313 81 1 5 1309 2846 63 0 0 chr17 94930675 94931039 -341612 - L1Md_T LINE L1 -1 6581 6218 5 1309 521 333 94 10 chr17 94931183 94931492 -341159 + L1M5 LINE L1 2461 2795 -3351 5 1309 528 277 92 0 chr17 94931907 94932037 -340614 - RSINE1 SINE B4 -22 143 2 5 1309 23 0 0 0 chr17 94932082 94932105 -340546 + AT_rich Low_complexity Low_complexity 1 23 0 5 1309 1600 80 18 9 chr17 94932201 94932429 -340222 - L1_Mus4 LINE L1 -5 6631 6402 5 1309 922 92 0 41 chr17 94932512 94932659 -339992 - B1_Mus1 SINE Alu 0 148 8 5 1309 1748 142 78 58 chr17 94932660 94933004 -339647 - ORR1B1 LTR MaLR -43 351 1 5 1309 266 240 26 39 chr17 94933141 94933219 -339432 + L1MB7 LINE L1 6029 6105 -79 5 1309 243 233 23 0 chr17 94933252 94933381 -339270 + (TA)n Simple_repeat Simple_repeat 1 132 0 5 1309 653 264 65 6 chr17 94933532 94933700 -338951 + B3A SINE B2 20 197 -1 5 1309 296 203 29 86 chr17 94933828 94933898 -338753 + PB1D10 SINE Alu 23 88 -29 5 1309 354 111 0 0 chr17 94934028 94934097 -338554 - ORR1A4 LTR MaLR 0 327 259 5 1309 1503 74 5 5 chr17 94934097 94934313 -338338 - L1Md_F2 LINE L1 0 6582 6367 5 1309 1607 157 78 92 chr17 94934403 94934762 -337889 - ORR1B1 LTR MaLR 0 394 41 5 1309 311 331 43 14 chr17 94935076 94935214 -337437 - MER2 DNA MER2_type -22 323 182 5 1309 33882 47 3 3 chr17 94935241 94940778 -331873 + L1Md_T LINE L1 1 5589 -297 5 1309 8452 35 0 0 chr17 94940778 94941774 -330877 + L1Md_T LINE L1 5590 6585 0 5 1309 566 264 98 0 chr17 94941793 94941956 -330695 - MER2 DNA MER2_type -165 180 2 5 1309 197 83 0 27 chr17 94942095 94942132 -330519 + (GA)n Simple_repeat Simple_repeat 1 36 0 5 1309 656 248 7 0 chr17 94942265 94942406 -330245 + B1_Mus2 SINE Alu 5 146 -1 5 1309 541 232 116 0 chr17 94942661 94942816 -329835 - Lx6 LINE L1 -648 6812 6640 5 1309 2702 251 51 25 chr17 94943163 94943908 -328743 - Lx6 LINE L1 -804 6656 5893 5 1309 464 299 37 23 chr17 94943912 94944128 -328523 + RLTR12B LTR ERVK 1 219 -309 5 1309 504 314 39 43 chr17 94944099 94944355 -328296 + RLTR15 LTR ERVK 59 313 -46 5 1309 2220 191 11 7 chr17 94944407 94944865 -327786 - Lx6 LINE L1 0 5880 5421 5 1309 13977 99 18 6 chr17 94944887 94947139 -325512 - MusHAL1 LINE L1 -281 2431 153 5 1309 530 198 0 60 chr17 94947160 94947172 -325479 + L1Md_F2 LINE L1 5907 5918 -736 5 1309 3997 58 23 8 chr17 94947172 94947692 -324959 - L1Md_F3 LINE L1 -1 6583 6056 5 1309 939 35 0 1 chr17 94947692 94947813 -324838 + L1Md_F3 LINE L1 5919 6039 -543 5 1309 1119 208 0 48 chr17 94947809 94948118 -324533 - L1VL1 LINE L1 -6127 295 2 5 1309 4568 139 72 5 chr17 94948120 94949021 -323630 - L1VL2 LINE L1 -2548 1067 95 5 1309 687 241 20 25 chr17 94949021 94949217 -323434 + Lx6 LINE L1 7253 7447 -13 5 1309 195 42 0 0 chr17 94950390 94950414 -322237 + (CTTG)n Simple_repeat Simple_repeat 4 27 0 5 1309 358 240 13 13 chr17 94950615 94950691 -321960 - ID4 SINE ID -1 82 7 5 1309 613 223 108 0 chr17 94952900 94953039 -319612 + B3 SINE B2 63 216 0 5 1309 183 300 40 0 chr17 94953170 94953220 -319431 - L3 LINE CR1 -135 4354 4303 5 1309 193 319 71 41 chr17 94953425 94953523 -319128 - L2a LINE L2 -281 3145 3045 5 1309 21 0 0 0 chr17 94953762 94953783 -318868 + AT_rich Low_complexity Low_complexity 1 21 0 5 1309 201 167 0 0 chr17 94953897 94953933 -318718 + T-rich Low_complexity Low_complexity 1 36 0 6 1309 483 18 0 0 chr17 94954142 94954198 -318453 + (GA)n Simple_repeat Simple_repeat 2 57 0 6 1309 362 292 11 43 chr17 94954295 94954388 -318263 - PB1D10 SINE Alu -20 97 8 6 1309 352 304 9 9 chr17 94954786 94954902 -317749 - PB1D10 SINE Alu -1 116 1 6 1309 350 298 72 67 chr17 94955078 94955272 -317379 + L1M4 LINE L1 4643 4837 -1309 6 1309 391 314 203 40 chr17 94955281 94955483 -317168 - MLT1A LTR MaLR 0 408 173 6 1309 591 257 128 22 chr17 94956759 94956938 -315713 + B3A SINE B2 1 198 0 6 1309 378 201 17 17 chr17 94957011 94957188 -315463 + CT-rich Low_complexity Low_complexity 4 180 0 6 1309 223 292 81 27 chr17 94958684 94958758 -313893 + PB1D7 SINE Alu 11 88 -32 6 1309 23 0 0 0 chr17 94958775 94958798 -313853 + AT_rich Low_complexity Low_complexity 1 23 0 6 1309 849 239 108 39 chr17 94959038 94959451 -313200 + L1MA4 LINE L1 5473 5938 -353 6 1309 549 0 0 0 chr17 94960070 94960131 -312520 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 1309 534 269 171 47 chr17 94960198 94960376 -312275 + Lx9 LINE L1 7234 7419 -225 6 1309 459 0 0 0 chr17 94960376 94960427 -312224 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1309 534 269 171 47 chr17 94960427 94960611 -312040 + Lx9 LINE L1 7420 7641 -3 6 1309 22 0 0 0 chr17 94960779 94960801 -311850 + AT_rich Low_complexity Low_complexity 1 22 0 6 1309 277 109 18 18 chr17 94961754 94961810 -310841 + (TCTA)n Simple_repeat Simple_repeat 1 56 0 6 1309 29 0 0 0 chr17 94961846 94961875 -310776 + AT_rich Low_complexity Low_complexity 1 29 0 6 1309 2136 155 83 16 chr17 94961875 94962307 -310344 - Lx2B LINE L1 0 7000 6540 6 1309 1198 295 116 2 chr17 94962387 94962836 -309815 + Lx8 LINE L1 6747 7246 -227 6 1309 302 272 0 12 chr17 94963639 94963721 -308930 - ID4 SINE ID -2 81 1 6 1309 197 0 71 0 chr17 94963939 94963967 -308684 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 6 1309 920 284 17 53 chr17 94965216 94965517 -307134 + B4A SINE B4 1 290 -2 6 1309 315 0 0 0 chr17 94965525 94965560 -307091 + (TATG)n Simple_repeat Simple_repeat 2 36 0 6 1309 618 281 0 24 chr17 94966397 94966561 -306090 + RSINE1 SINE B4 2 161 -4 6 1309 356 290 87 0 chr17 94966734 94966872 -305779 - Tigger7 DNA MER2_type -90 2401 2252 6 1309 279 0 0 0 chr17 94967023 94967054 -305597 + (A)n Simple_repeat Simple_repeat 1 31 0 6 1309 407 231 0 53 chr17 94967428 94967542 -305109 + Lx8 LINE L1 6341 6448 -1025 6 1309 2972 255 81 22 chr17 94967543 94968436 -304215 + Lx8 LINE L1 6385 7329 -144 6 1309 774 84 0 0 chr17 94968437 94968544 -304107 + (GAAA)n Simple_repeat Simple_repeat 3 109 0 6 1309 384 22 0 0 chr17 94968544 94968588 -304063 + (GGGA)n Simple_repeat Simple_repeat 1 45 0 6 1309 256 247 95 36 chr17 94968612 94968696 -303955 + MTEa LTR MaLR 270 358 -21 6 1309 649 271 0 29 chr17 94969001 94969138 -303513 - ID_B1 SINE B4 -6 218 86 6 1309 1116 71 0 0 chr17 94969230 94969370 -303281 - B1_Mus1 SINE Alu -4 144 5 6 1309 390 266 0 0 chr17 94969627 94969706 -302945 + PB1D10 SINE Alu 32 110 -7 6 1309 678 240 22 6 chr17 94972929 94973109 -299542 + Lx2B LINE L1 6102 6284 -716 6 1309 3632 42 4 2 chr17 94973116 94973575 -299076 + ORR1A1-int LTR MaLR 1333 1792 0 6 1309 2447 52 0 3 chr17 94973575 94973883 -298768 + ORR1A1 LTR MaLR 1 307 -39 6 1309 36553 15 1 7 chr17 94973883 94979270 -293381 + L1Md_A LINE L1 237 5586 -297 6 1309 9093 1 0 0 chr17 94979270 94980266 -292385 + L1Md_A LINE L1 5587 6582 0 6 1309 1171 14 0 0 chr17 94980266 94980404 -292247 + L1Md_A LINE L1 5449 5586 -297 6 1309 8863 13 0 0 chr17 94980404 94981400 -291251 + L1Md_A LINE L1 5587 6582 0 6 1309 459 18 0 0 chr17 94981401 94981456 -291195 + ORR1A1 LTR MaLR 292 346 0 6 1309 3036 188 103 3 chr17 94981456 94982108 -290543 + Lx2B LINE L1 6280 6996 -4 6 1309 28 29 0 0 chr17 94982120 94982155 -290496 + AT_rich Low_complexity Low_complexity 1 35 0 6 1309 573 230 45 22 chr17 94982685 94982861 -289790 + B3 SINE B2 3 187 -8 6 1309 753 240 62 58 chr17 94982866 94983074 -289577 + B4A SINE B4 84 292 0 6 1309 246 341 34 60 chr17 94984682 94984916 -287735 + RMER2 LTR ERV1 340 567 0 6 1309 426 292 167 73 chr17 94984929 94985217 -287434 - LTR16D LTR ERVL -115 536 222 6 1309 26201 101 69 3 chr17 94986512 94992276 -280375 - L1_Mus1 LINE L1 0 6567 389 6 1309 7534 114 30 17 chr17 94992375 94993566 -279085 + Lx4A LINE L1 5850 7056 -2 6 1309 230 0 33 0 chr17 94993599 94993629 -279022 + (TAAAA)n Simple_repeat Simple_repeat 2 32 0 6 1309 236 224 39 13 chr17 94993629 94993706 -278945 + L1M2 LINE L1 4410 4488 -1655 6 1309 271 253 59 24 chr17 94993706 94993717 -278934 + MT2B LTR ERVL 152 165 -436 6 1309 579 225 33 0 chr17 94993717 94993847 -278804 + B1_Mur2 SINE Alu 2 143 -6 6 1309 234 288 59 81 chr17 94993734 94993870 -278781 + B4A SINE B4 113 245 -47 6 1309 358 298 0 0 chr17 94993900 94994004 -278647 + L1_Mur1 LINE L1 4477 4580 -1306 6 1309 381 344 24 8 chr17 94994041 94994164 -278487 + B1_Mur1 SINE Alu 4 128 -21 6 1309 238 339 16 63 chr17 94996183 94996309 -276342 - LTR90A LTR LTR -740 236 117 6 1309 366 226 0 0 chr17 94996974 94997080 -275571 + (ATGGTG)n Simple_repeat Simple_repeat 2 107 0 6 1309 450 311 43 21 chr17 94997088 94997275 -275376 - HAL1-2a_MD LINE L1 -508 2516 2326 6 1309 269 351 55 50 chr17 94997560 94997761 -274890 - L2a LINE L2 0 3426 3225 6 1309 14666 72 5 1 chr17 94997764 94999999 -272652 + Lx3_Mus LINE L1 3834 6080 -929 6 1309 5888 95 19 12 chr17 95000000 95000897 -271754 + Lx3A LINE L1 6076 6978 -3 1 1309 23 33 0 0 chr17 95000897 95000927 -271724 + AT_rich Low_complexity Low_complexity 1 30 0 2 1309 293 360 40 8 chr17 95000927 95001053 -271598 - L2a LINE L2 -311 3115 2986 3 1309 192 77 0 0 chr17 95001321 95001347 -271304 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 4 1309 194 0 0 37 chr17 95001362 95001389 -271262 + (TTTTC)n Simple_repeat Simple_repeat 3 28 0 5 1309 252 0 0 0 chr17 95001390 95001418 -271233 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 1309 2430 85 6 12 chr17 95001442 95001788 -270863 - L1_Mus3 LINE L1 -15 6623 6280 7 1309 459 338 78 15 chr17 95001831 95002164 -270487 - L2a LINE L2 -845 2574 2221 3 1309 278 295 61 86 chr17 95002246 95002491 -270160 + MARNA DNA Mariner 173 411 -175 8 1309 368 81 40 13 chr17 95002568 95002643 -270008 + (TAGA)n Simple_repeat Simple_repeat 3 79 0 9 1309 347 215 38 0 chr17 95003009 95003088 -269563 - ID4_ SINE ID -1 82 1 1 1309 2871 79 2 75 chr17 95003472 95003926 -268725 - BGLII LTR ERVK 0 421 1 1 1309 183 129 0 0 chr17 95004095 95004126 -268525 + (CTTTG)n Simple_repeat Simple_repeat 2 32 0 1 1309 458 241 64 4 chr17 95004158 95004299 -268352 - B1F SINE Alu -2 147 3 1 1309 777 174 9 14 chr17 95004607 95004749 -267902 + B1_Mur2 SINE Alu 1 137 -177 1 1309 207 270 77 119 chr17 95005551 95005719 -266932 - MIR SINE MIR -101 161 1 1 1309 1222 238 98 6 chr17 95005822 95006169 -266482 - MTE2b LTR MaLR 0 379 1 1 1309 1234 48 0 0 chr17 95006470 95006616 -266035 + B1_Mm SINE Alu 2 147 0 1 1309 283 250 12 0 chr17 95006646 95006726 -265925 + L1MA6 LINE L1 6171 6251 -49 1 1309 223 321 47 12 chr17 95006846 95006931 -265720 + PB1D9 SINE Alu 12 99 -21 1 1309 372 291 0 37 chr17 95006942 95007049 -265602 + polypurine Low_complexity Low_complexity 3 105 0 2 1309 285 29 0 0 chr17 95007872 95007906 -264745 + (A)n Simple_repeat Simple_repeat 1 34 0 2 1309 27 73 0 0 chr17 95009055 95009110 -263541 + AT_rich Low_complexity Low_complexity 1 55 0 2 1309 34590 33 0 8 chr17 95009305 95014382 -258269 + L1Md_T LINE L1 556 5586 -297 2 1309 8402 33 1 1 chr17 95014383 95015377 -257274 + L1Md_T LINE L1 5588 6581 -1 2 1309 584 229 229 0 chr17 95015735 95015910 -256741 - B3 SINE B2 0 216 2 2 1309 973 188 8 112 chr17 95015978 95016229 -256422 + URR1B DNA MER1_type 1 225 0 2 1309 636 302 22 106 chr17 95016583 95016803 -255848 + B4A SINE B4 4 219 -73 2 1309 926 232 23 23 chr17 95016803 95017019 -255632 + B3 SINE B2 1 216 0 2 1309 636 302 22 106 chr17 95017019 95017109 -255542 + B4A SINE B4 220 288 -4 2 1309 722 200 20 20 chr17 95017555 95017703 -254948 + B1_Mur4 SINE Alu 3 150 0 2 1309 225 0 0 0 chr17 95017750 95017775 -254876 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1309 281 257 257 0 chr17 95017968 95018116 -254535 + MT2A LTR ERVL 335 520 -13 3 1309 263 336 67 33 chr17 95019168 95019288 -253363 - LTR33 LTR ERVL -356 159 36 3 1309 1228 34 17 17 chr17 95019645 95019825 -252826 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 3 1309 728 307 118 48 chr17 95019860 95020192 -252459 - ORR1E LTR MaLR -1 358 4 3 1309 256 280 93 0 chr17 95020192 95020256 -252395 - MTE-int LTR MaLR -50 1530 1460 3 1309 1509 336 172 50 chr17 95020270 95021031 -251620 - MTE-int LTR MaLR -363 1217 351 3 1309 2848 97 19 0 chr17 95021031 95021445 -251206 - BGLII_Mus LTR ERVK 0 422 1 3 1309 1509 336 172 50 chr17 95021445 95021739 -250912 - MTE-int LTR MaLR -1230 350 33 3 1309 296 354 77 45 chr17 95021776 95021998 -250653 - ORR1E LTR MaLR -112 247 19 3 1309 670 182 132 31 chr17 95022082 95022241 -250410 + B3A SINE B2 7 181 -17 3 1309 405 0 0 0 chr17 95022450 95022495 -250156 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 3 1309 440 314 99 28 chr17 95022671 95022812 -249839 - RSINE1 SINE B4 -13 152 2 3 1309 297 197 30 0 chr17 95024320 95024386 -248265 + PB1D10 SINE Alu 48 115 -2 4 1309 253 271 21 0 chr17 95024762 95024858 -247793 + L1MEf LINE L1 925 1022 -5178 4 163 30680 89 8 12 chr17 95024966 95030308 -242343 + L1Md_F2 LINE L1 250 5585 -298 4 1310 7325 75 8 4 chr17 95030309 95031289 -241362 + L1Md_F2 LINE L1 5587 6570 -12 4 1310 231 36 0 0 chr17 95031754 95031782 -240869 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 4 1310 183 42 0 0 chr17 95032725 95032749 -239902 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1310 730 309 76 9 chr17 95032855 95033080 -239571 - B4A SINE B4 -32 260 21 4 1310 1313 93 5 16 chr17 95033283 95033469 -239182 + B2_Mm1t SINE B2 1 184 -9 4 1310 799 284 5 5 chr17 95034214 95034419 -238232 - B3 SINE B2 -10 206 2 4 1310 530 0 31 0 chr17 95034966 95035031 -237620 + (TAGA)n Simple_repeat Simple_repeat 3 69 0 4 1310 531 230 109 15 chr17 95035114 95035251 -237400 + RSINE1 SINE B4 4 153 -12 4 1310 275 152 0 33 chr17 95035300 95035313 -237338 + (TAA)n Simple_repeat Simple_repeat 3 15 0 5 1310 733 221 0 27 chr17 95035313 95035462 -237189 + B1_Mus2 SINE Alu 1 145 -2 5 1310 275 152 0 33 chr17 95035462 95035509 -237142 + (TAA)n Simple_repeat Simple_repeat 1 46 0 5 1310 305 219 177 0 chr17 95035539 95035635 -237016 + B4A SINE B4 174 286 -6 5 1310 930 140 0 0 chr17 95035636 95035815 -236836 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 1310 240 35 0 0 chr17 95035843 95035872 -236779 + (TC)n Simple_repeat Simple_repeat 1 29 0 5 1310 360 64 0 0 chr17 95035872 95035918 -236733 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 1310 364 247 0 0 chr17 95035959 95036032 -236619 + ID_B1 SINE B4 143 215 -9 5 1310 749 244 44 44 chr17 95036206 95036480 -236171 + Lx7 LINE L1 7093 7366 -330 5 1310 714 134 28 21 chr17 95036573 95036718 -235933 + Lx4A LINE L1 6912 7057 -1 5 1310 433 293 0 57 chr17 95036831 95036954 -235697 + PB1D10 SINE Alu 2 117 0 6 1310 376 234 101 171 chr17 95036990 95037119 -235532 + PB1D10 SINE Alu 1 149 0 6 1310 21 0 0 0 chr17 95037238 95037259 -235392 + AT_rich Low_complexity Low_complexity 1 21 0 6 1310 8313 29 3 5 chr17 95037542 95038538 -234113 + L1Md_F2 LINE L1 5589 6582 0 6 1310 21 0 0 0 chr17 95038573 95038594 -234057 + AT_rich Low_complexity Low_complexity 1 21 0 6 1310 876 37 0 0 chr17 95038780 95038888 -233763 + B1_Mm SINE Alu 40 147 0 6 1310 333 0 0 0 chr17 95038889 95038926 -233725 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 6 1310 3080 59 0 3 chr17 95039703 95040093 -232558 - L1Md_F3 LINE L1 0 6584 6196 6 1310 216 0 0 0 chr17 95040116 95040140 -232511 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1310 5283 121 12 27 chr17 95040146 95041701 -230950 + L1Md_F3 LINE L1 446 1955 -3928 6 1310 12879 48 0 0 chr17 95041697 95043361 -229290 + L1Md_F3 LINE L1 3923 5586 -297 6 1310 8293 37 1 1 chr17 95043362 95044359 -228292 + L1Md_F3 LINE L1 5588 6584 0 6 1310 426 181 0 0 chr17 95044551 95044656 -227995 + GA-rich Low_complexity Low_complexity 2 106 0 7 1310 655 235 70 51 chr17 95044684 95044841 -227810 + RSINE1 SINE B4 6 165 0 7 1310 265 337 91 34 chr17 95044841 95044859 -227792 + B3A SINE B2 5 189 -9 7 1310 668 213 55 28 chr17 95045520 95045665 -226986 + B1_Mur2 SINE Alu 1 149 0 7 1310 442 177 0 93 chr17 95045711 95045904 -226747 + G-rich Low_complexity Low_complexity 4 178 0 7 1310 365 308 5 0 chr17 95045923 95046011 -226640 + PB1D10 SINE Alu 3 92 -56 7 1310 581 333 6 19 chr17 95046435 95046594 -226057 + RSINE1 SINE B4 3 159 -6 7 1310 756 261 19 33 chr17 95046715 95046929 -225722 - B3 SINE B2 -4 212 2 7 1310 1112 296 95 31 chr17 95048114 95048599 -224052 + MER34A1 LTR ERV1 1 516 -71 7 1310 541 340 38 42 chr17 95048709 95048970 -223681 + B4A SINE B4 33 292 0 7 1310 628 315 12 18 chr17 95049273 95049438 -223213 + RSINE1 SINE B4 2 165 0 8 1310 383 325 170 28 chr17 95049521 95049733 -222918 - Tigger5 DNA MER2_type -2164 242 1 8 1310 312 27 0 0 chr17 95049745 95049782 -222869 + (TA)n Simple_repeat Simple_repeat 1 37 0 8 1310 206 111 56 0 chr17 95050502 95050538 -222113 + (ATTG)n Simple_repeat Simple_repeat 2 39 0 8 1310 4504 157 53 27 chr17 95050595 95051474 -221177 - RLTR13D6 LTR ERVK 0 902 1 8 1310 337 291 39 10 chr17 95052179 95052283 -220368 - PB1D10 SINE Alu -34 115 9 8 1310 328 268 30 40 chr17 95052769 95052870 -219781 + MLT1B LTR MaLR 18 117 -273 8 1310 283 143 61 0 chr17 95052869 95052918 -219733 - MTE2a LTR MaLR -327 52 1 8 1310 574 296 86 77 chr17 95052918 95053503 -219148 + L1MA9 LINE L1 5713 6302 -10 8 1310 394 238 273 0 chr17 95053919 95054062 -218589 + MTEa LTR MaLR 193 374 -5 8 1310 412 281 4 59 chr17 95054206 95054325 -218326 + PB1D10 SINE Alu 3 118 -31 9 1310 211 296 18 18 chr17 95054324 95054379 -218272 + B1_Mur4 SINE Alu 60 114 -36 9 1310 619 286 59 17 chr17 95054381 95054619 -218032 + ERVL-E-int LTR ERVL 2793 3040 -2627 9 1310 699 304 45 12 chr17 95054630 95054873 -217778 + MLT2B4 LTR ERVL 23 273 -283 9 1310 838 245 18 32 chr17 95054884 95055103 -217548 - B3 SINE B2 0 216 1 9 1310 331 257 56 19 chr17 95056237 95056344 -216307 + PB1D9 SINE Alu 3 113 -7 9 1310 189 139 0 0 chr17 95056515 95056558 -216093 + (T)n Simple_repeat Simple_repeat 1 43 0 9 1310 407 299 0 0 chr17 95056563 95056660 -215991 - PB1 SINE Alu -27 100 4 9 1310 644 228 76 0 chr17 95056680 95056825 -215826 + Lx8 LINE L1 6243 6398 -1075 9 1310 5176 39 2 0 chr17 95056821 95057431 -215220 - L1Md_F2 LINE L1 -144 5739 5129 9 1310 1087 23 31 0 chr17 95057432 95057560 -215091 + L1Md_F2 LINE L1 5743 5874 -708 9 1310 1055 74 7 0 chr17 95057564 95057712 -214939 + B2_Mm1a SINE B2 2 150 -43 1 1310 198 0 0 0 chr17 95057712 95057734 -214917 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 1 1310 1220 48 0 0 chr17 95057734 95057880 -214771 + B1_Mus2 SINE Alu 2 147 0 1 1310 5473 68 20 3 chr17 95057888 95058583 -214068 + L1Md_F2 LINE L1 5864 6570 -12 9 1310 1299 279 124 43 chr17 95058583 95059089 -213562 + Lx8 LINE L1 6387 6933 -540 9 1310 1128 286 42 7 chr17 95059088 95059377 -213274 + Lx8 LINE L1 7036 7334 -139 9 1310 387 302 17 8 chr17 95059397 95059517 -213134 - B3 SINE B2 -3 213 93 1 1310 819 237 14 72 chr17 95060513 95060736 -211915 - Lx8 LINE L1 -117 7356 7147 1 1310 386 209 89 7 chr17 95060751 95060886 -211765 + L1MC2 LINE L1 4849 4994 -1152 1 1310 281 274 0 16 chr17 95060899 95060962 -211689 + B1F SINE Alu 73 134 -15 1 1310 446 250 84 166 chr17 95061132 95061549 -211102 - RLTR11A2 LTR ERVK -63 390 8 1 1310 654 250 14 0 chr17 95061582 95061730 -210921 + B3A SINE B2 8 157 -41 1 1310 644 272 114 49 chr17 95062349 95062701 -209950 + L1MC2 LINE L1 5806 6175 -169 1 1310 350 327 25 38 chr17 95062701 95062860 -209791 + RSINE1 SINE B4 3 159 -6 1 1310 644 272 114 49 chr17 95062860 95062874 -209777 + L1MC2 LINE L1 6176 6196 -148 1 1310 1425 142 233 0 chr17 95062905 95063236 -209415 + RMER6D LTR ERVK 1 408 -312 1 1310 3962 50 2 32 chr17 95063236 95063733 -208918 - LTRIS_Mm LTR ERV1 0 482 1 1 1310 14753 281 39 54 chr17 95063733 95071246 -201405 - MMERGLN-int LTR ERV1 0 7778 5 1 1310 3976 48 2 32 chr17 95071248 95071745 -200906 - LTRIS_Mm LTR ERV1 0 482 1 1 1310 1951 138 21 24 chr17 95071748 95072128 -200523 + RMER6A LTR ERVK 378 756 0 1 1310 302 273 103 13 chr17 95072131 95072287 -200364 + L1MC2 LINE L1 6173 6342 -2 1 1310 405 0 0 0 chr17 95072943 95072988 -199663 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1310 23 0 0 0 chr17 95073590 95073613 -199038 + AT_rich Low_complexity Low_complexity 1 23 0 1 1310 226 355 31 40 chr17 95074301 95074524 -198127 - L2 LINE L2 -339 3080 2860 1 1310 573 28 0 0 chr17 95076646 95076717 -195934 + (TC)n Simple_repeat Simple_repeat 2 72 0 1 1310 302 248 19 6 chr17 95076912 95077002 -195649 - MLT1H LTR MaLR -400 149 16 1 1310 1091 83 114 40 chr17 95078073 95078249 -194402 + B2_Mm2 SINE B2 2 190 -5 1 1310 323 255 20 20 chr17 95078275 95078375 -194276 + (CATA)n Simple_repeat Simple_repeat 1 100 0 1 1310 194 0 39 0 chr17 95078793 95078819 -193832 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1 1310 427 236 276 50 chr17 95078967 95079183 -193468 + MLT1A0 LTR MaLR 99 363 -2 1 1310 303 247 26 0 chr17 95079306 95079383 -193268 - ID2 SINE ID 0 83 5 1 1310 7950 159 58 2 chr17 95079659 95080998 -191653 - Lx5 LINE L1 0 7050 5637 1 1310 5862 138 13 11 chr17 95081001 95081951 -190700 + Lx5 LINE L1 4689 5646 -990 1 1310 877 63 196 7 chr17 95082039 95082182 -190469 + LTRIS3 LTR ERV1 343 512 0 1 1310 278 207 25 75 chr17 95082182 95082302 -190349 + RLTR1B-int LTR ERV1 1 114 -3584 1 1310 727 83 0 2 chr17 95082393 95082502 -190149 + RLTR1B-int LTR ERV1 139 293 -3006 1 1310 853 147 73 73 chr17 95082838 95083029 -189622 + RMER16-int LTR ERVK 141 331 -5075 1 1310 4340 139 61 17 chr17 95083015 95083740 -188911 + RMER16-int LTR ERVK 690 1446 -3960 1 1310 9504 216 132 17 chr17 95083731 95084571 -188080 + RLTR1B-int LTR ERV1 761 1702 -3361 1 1310 531 0 0 0 chr17 95084571 95084630 -188021 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 1310 9504 116 44 69 chr17 95084630 95086452 -186199 + RLTR1B-int LTR ERV1 1165 4146 -917 1 1310 925 208 45 13 chr17 95086545 95086769 -185882 + RLTR1B-int LTR ERV1 4791 5021 -42 1 1310 2952 69 100 7 chr17 95086772 95087212 -185439 + LTRIS2 LTR ERV1 5 485 -79 1 1310 270 81 0 0 chr17 95087212 95087249 -185402 + (A)n Simple_repeat Simple_repeat 1 37 0 1 1310 238 194 133 40 chr17 95089133 95089208 -183443 + BC1_Mm scRNA scRNA 11 92 -60 1 1310 907 308 44 39 chr17 95089221 95089836 -182815 + L1M2 LINE L1 2218 2835 -3308 1 1310 8628 24 5 7 chr17 95089875 95090704 -181947 - L1Md_F2 LINE L1 0 6582 5758 1 1310 3201 47 13 0 chr17 95090704 95091084 -181567 - IAPEY_LTR LTR ERVK 0 385 1 1 1310 8628 24 5 7 chr17 95091084 95091247 -181404 - L1Md_F2 LINE L1 -825 5757 5592 1 1310 597 295 108 53 chr17 95091247 95091809 -180842 + L1M2 LINE L1 2888 3480 -2663 1 1310 384 325 50 33 chr17 95091821 95091942 -180709 + RSINE1 SINE B4 16 138 -27 1 1310 357 24 0 0 chr17 95091943 95091985 -180666 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1310 207 0 0 0 chr17 95092813 95092836 -179815 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1310 285 347 59 8 chr17 95093282 95093401 -179250 + LTR16E1 LTR ERVL 254 378 -160 1 1310 604 302 100 19 chr17 95094218 95094478 -178173 - Lx8 LINE L1 -146 7327 7047 1 1310 3757 104 22 36 chr17 95094774 95094966 -177685 + Lx LINE L1 6086 6277 -377 1 1310 3589 31 28 12 chr17 95094966 95095393 -177258 - RLTR10C LTR ERVK 0 436 3 1 1310 3757 104 22 36 chr17 95095393 95095777 -176874 + Lx LINE L1 6278 6654 0 1 1310 411 296 33 0 chr17 95095793 95095947 -176704 + L1MC LINE L1 5689 5849 -307 1 1310 5276 17 0 0 chr17 95095974 95096570 -176081 + L1Md_T LINE L1 4991 5586 -297 1 1310 8841 22 0 0 chr17 95096570 95097566 -175085 + L1Md_T LINE L1 5587 6582 0 1 1310 1212 22 0 0 chr17 95097566 95097702 -174949 + L1Md_T LINE L1 5451 5586 -297 1 1310 8458 40 0 0 chr17 95097702 95098697 -173954 + L1Md_T LINE L1 5587 6581 -1 1 1310 1333 116 16 0 chr17 95098948 95099138 -173513 + B2_Mm2 SINE B2 1 193 -2 1 1310 240 310 0 14 chr17 95099140 95099212 -173439 + B4A SINE B4 2 72 -220 1 1310 554 220 18 0 chr17 95099286 95099395 -173256 - PB1D9 SINE Alu -5 115 5 1 1310 5453 38 0 0 chr17 95099441 95100076 -172575 - L1Md_T LINE L1 0 6582 5948 1 1310 872 196 53 93 chr17 95100754 95100979 -171672 + B3 SINE B2 1 216 0 1 1310 22 35 0 0 chr17 95100982 95101011 -171640 + AT_rich Low_complexity Low_complexity 1 29 0 1 1310 941 155 0 26 chr17 95101229 95101381 -171270 + B1_Mur1 SINE Alu 1 148 -1 1 1310 27 0 0 0 chr17 95103116 95103143 -169508 + AT_rich Low_complexity Low_complexity 1 27 0 1 1310 678 164 0 0 chr17 95103278 95103400 -169251 + T-rich Low_complexity Low_complexity 1 122 0 1 1310 520 91 25 22 chr17 95103438 95103540 -169111 - B1_Mur3 SINE Alu 0 149 46 1 1310 2132 153 5 45 chr17 95103542 95103924 -168727 - Lx2B LINE L1 -651 6349 5983 1 1310 1624 95 86 11 chr17 95104123 95104390 -168261 - RMER6B LTR ERVK -174 287 1 1 1310 204 354 68 14 chr17 95104440 95104586 -168065 - MER5B DNA MER1_type -18 160 7 1 1310 2197 132 19 11 chr17 95104838 95105088 -167563 + MTC LTR MaLR 43 297 -124 1 1310 3815 145 91 6 chr17 95105088 95105768 -166883 - Lx LINE L1 0 6654 5917 1 1310 2197 132 19 11 chr17 95105768 95105893 -166758 + MTC LTR MaLR 298 421 0 1 1310 1023 253 103 3 chr17 95105894 95106262 -166389 - RCHARR1 DNA MER1_type -88 886 482 1 1310 389 296 60 6 chr17 95106314 95106475 -166176 - B4A SINE B4 -4 288 119 1 1310 1566 188 55 30 chr17 95106566 95106929 -165722 + ORR1D1 LTR MaLR 1 372 -2 1 1310 1587 269 38 11 chr17 95107388 95107835 -164816 + MT2A LTR ERVL 4 462 -71 1 1310 390 136 0 0 chr17 95107843 95107924 -164727 + (CA)n Simple_repeat Simple_repeat 2 82 0 1 1310 21 0 0 0 chr17 95107994 95108015 -164636 + AT_rich Low_complexity Low_complexity 1 21 0 1 1310 201 312 78 0 chr17 95108175 95108252 -164399 + MIRc SINE MIR 44 126 -142 1 1310 31910 72 6 9 chr17 95109146 95114312 -158339 + L1Md_F3 LINE L1 440 5586 -297 1 1310 8308 35 1 3 chr17 95114312 95115310 -157341 + L1Md_F3 LINE L1 5587 6582 -2 1 1310 188 389 22 11 chr17 95115460 95115551 -157100 + MIR SINE MIR 58 149 -59 1 1310 228 321 177 23 chr17 95116701 95116921 -155730 + L2 LINE L2 1849 2102 -1317 1 1310 230 289 59 24 chr17 95116959 95117044 -155607 - PB1D10 SINE Alu -32 88 1 1 1310 257 309 0 0 chr17 95117488 95117556 -155095 + GA-rich Low_complexity Low_complexity 3 70 0 1 1310 544 299 109 0 chr17 95117571 95117708 -154943 + RSINE1 SINE B4 14 165 0 1 1310 387 333 47 16 chr17 95118042 95118359 -154292 + L1MD LINE L1 3415 3741 -2405 1 1310 365 193 180 11 chr17 95118370 95118459 -154192 + RSINE1 SINE B4 26 129 -36 1 1310 378 0 0 0 chr17 95118470 95118512 -154139 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1310 21 0 0 0 chr17 95118526 95118547 -154104 + AT_rich Low_complexity Low_complexity 1 21 0 1 1310 923 236 5 95 chr17 95118583 95118703 -153948 + Lx7 LINE L1 5501 5606 -241 1 1310 2551 146 24 5 chr17 95118703 95119116 -153535 - MTC LTR MaLR 0 421 1 1 1310 923 245 9 89 chr17 95119116 95119467 -153184 + Lx7 LINE L1 5607 5972 -1672 1 1310 2399 176 37 64 chr17 95119471 95120018 -152633 + Lx2B LINE L1 6460 6991 -9 1 1310 611 245 1 35 chr17 95120084 95120238 -152413 - RMER1C Other Other -593 749 583 1 1310 278 263 0 26 chr17 95120348 95120426 -152225 + ID_B1 SINE B4 107 182 -42 1 1310 224 185 62 0 chr17 95120448 95120505 -152146 + ID2 SINE ID 3 63 -89 1 1310 360 0 0 0 chr17 95120509 95120549 -152102 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 1 1310 261 345 77 8 chr17 95120553 95120670 -151981 + MLT1E2 LTR MaLR 247 371 -256 1 1310 590 131 28 9 chr17 95120719 95120827 -151824 - Lx5 LINE L1 -1018 6032 5923 1 1310 2014 116 16 108 chr17 95120833 95120956 -151695 + ORR1B1 LTR MaLR 41 155 -239 1 1310 543 31 0 0 chr17 95120956 95121021 -151630 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 1310 2014 116 16 108 chr17 95121021 95121285 -151366 + ORR1B1 LTR MaLR 156 392 -2 1 1310 1269 114 292 0 chr17 95121288 95121552 -151099 - Lx4B LINE L1 -1131 5927 5587 1 1310 1225 267 160 32 chr17 95122352 95122851 -149800 - MER34A1 LTR ERV1 0 587 25 1 1310 640 324 50 64 chr17 95123269 95123645 -149006 - MTEa LTR MaLR -8 371 1 1 1310 238 256 0 0 chr17 95123780 95123823 -148828 + ID_B1 SINE B4 159 201 -23 1 1310 738 285 10 29 chr17 95124589 95124795 -147856 + B3 SINE B2 15 216 0 1 1310 1058 258 31 34 chr17 95125023 95125372 -147279 + RLTR15 LTR ERVK 1 348 -11 1 1310 554 201 294 6 chr17 95125445 95125605 -147046 + B3 SINE B2 3 208 -8 1 1310 256 258 224 12 chr17 95125749 95125841 -146810 + B1F SINE Alu 2 113 -36 1 1310 228 239 141 0 chr17 95125782 95125853 -146798 + ID_B1 SINE B4 132 212 -12 1 1310 22 56 0 0 chr17 95127861 95127897 -144754 + AT_rich Low_complexity Low_complexity 1 36 0 1 1310 2752 64 0 0 chr17 95128157 95128503 -144148 - ORR1A0 LTR MaLR 0 346 1 1 1310 256 103 0 0 chr17 95128578 95128617 -144034 + B3A SINE B2 1 39 -159 1 1310 1118 221 29 78 chr17 95128620 95128929 -143722 + Lx6 LINE L1 7162 7455 -5 1 1310 710 250 26 99 chr17 95128944 95129135 -143516 + B3 SINE B2 30 206 -10 1 1310 31 88 0 0 chr17 95129137 95129217 -143434 + AT_rich Low_complexity Low_complexity 1 80 0 1 1310 3441 25 5 2 chr17 95129390 95129799 -142852 - L1Md_F2 LINE L1 -1 6581 6172 2 1310 4806 67 3 5 chr17 95130046 95130677 -141974 + L1Md_F2 LINE L1 5943 6572 -10 2 1310 348 267 242 26 chr17 95131233 95131464 -141187 - B4A SINE B4 -11 281 1 2 1310 192 40 0 0 chr17 95131988 95132013 -140638 + (CAG)n Simple_repeat Simple_repeat 1 25 0 2 1310 23 0 0 0 chr17 95132736 95132759 -139892 + AT_rich Low_complexity Low_complexity 1 23 0 2 1310 461 285 55 76 chr17 95133079 95133409 -139242 - MER33 DNA MER1_type -1 323 1 2 1310 285 270 38 57 chr17 95133753 95133859 -138792 + B1F2 SINE Alu 36 139 -10 2 1310 402 219 12 0 chr17 95133787 95133869 -138782 + ID_B1 SINE B4 142 224 0 2 1310 2110 107 163 62 chr17 95134053 95134471 -138180 + RMER6B LTR ERVK 2 461 0 2 1310 279 262 16 0 chr17 95136031 95136092 -136559 - tRNA-Ala-GCY_ tRNA tRNA -12 63 2 2 1310 220 250 0 18 chr17 95136555 95136612 -136039 + A-rich Low_complexity Low_complexity 2 57 0 2 1310 616 336 0 0 chr17 95136656 95136805 -135846 - RSINE1 SINE B4 -14 151 3 2 1310 323 337 105 71 chr17 95136861 95137155 -135496 + ORR1E LTR MaLR 33 336 -23 2 1310 237 275 0 24 chr17 95137458 95137540 -135111 + L1M4 LINE L1 5585 5664 -510 2 1310 602 215 0 0 chr17 95137941 95138048 -134603 + B3 SINE B2 1 107 -109 2 1310 414 196 0 0 chr17 95139035 95139127 -133524 + (CA)n Simple_repeat Simple_repeat 1 92 0 2 1310 375 326 78 21 chr17 95139158 95139299 -133352 + RSINE1 SINE B4 9 157 -8 2 1310 435 254 65 41 chr17 95139493 95139616 -133035 + B1F SINE Alu 22 147 -2 2 1310 780 246 60 5 chr17 95140155 95140355 -132296 + B3 SINE B2 1 211 -5 2 1310 26 50 0 0 chr17 95140355 95140395 -132256 + AT_rich Low_complexity Low_complexity 1 40 0 2 1310 280 309 12 0 chr17 95140567 95140651 -132000 + MTEa LTR MaLR 290 374 -5 2 1310 331 278 100 18 chr17 95140731 95140841 -131810 + LTR40b LTR ERVL 335 453 -9 2 1310 1570 137 30 8 chr17 95140917 95141182 -131469 + RLTR15 LTR ERVK 89 359 0 2 1310 1772 140 14 10 chr17 95141182 95141460 -131191 - RMER6B LTR ERVK -182 279 1 2 1310 381 289 80 34 chr17 95141554 95141816 -130835 + L1MC LINE L1 2658 2931 -3215 2 1310 747 50 10 10 chr17 95141821 95141914 -130737 + B1_Mus2 SINE Alu 45 138 -9 2 1310 315 0 0 0 chr17 95141914 95141949 -130702 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1310 278 170 244 69 chr17 95142024 95142196 -130455 + L1M3 LINE L1 5433 5639 -544 2 1310 716 284 49 11 chr17 95142549 95142834 -129817 + Ricksha_a DNA MuDR 270 565 -616 2 1310 824 264 42 0 chr17 95143636 95143829 -128822 + B3 SINE B2 2 202 -14 2 1310 201 147 0 0 chr17 95143861 95143895 -128756 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 2 1310 243 103 0 0 chr17 95143899 95143938 -128713 + (CAAG)n Simple_repeat Simple_repeat 2 40 0 2 1310 556 254 22 7 chr17 95143944 95144083 -128568 + ID_B1 SINE B4 79 219 -5 2 1310 540 0 0 0 chr17 95144097 95144157 -128494 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 2 1310 231 306 0 14 chr17 95144345 95144418 -128233 + RSINE1 SINE B4 92 163 -2 2 1310 502 172 147 8 chr17 95144750 95144879 -127772 + B1F2 SINE Alu 2 148 -1 2 1310 551 63 0 25 chr17 95145017 95145098 -127553 + (GAAAA)n Simple_repeat Simple_repeat 2 80 0 2 1310 337 222 10 118 chr17 95145393 95145495 -127156 + RSINE1 SINE B4 27 117 -48 2 1310 450 231 11 0 chr17 95145581 95145672 -126979 - ID_B1 SINE B4 -1 223 132 2 1310 362 266 202 0 chr17 95145672 95145705 -126946 - B1F1 SINE Alu 0 149 1 2 1310 483 272 0 64 chr17 95146350 95146507 -126144 - RSINE1 SINE B4 -17 148 2 2 1310 352 302 31 0 chr17 95146579 95146675 -125976 + ID_B1 SINE B4 91 189 -35 2 1310 409 165 0 21 chr17 95146740 95146833 -125818 + L1Md_A LINE L1 6492 6582 0 2 1310 719 174 34 55 chr17 95148455 95148544 -124107 - B1_Mur2 SINE Alu -2 147 58 2 1310 201 39 0 0 chr17 95148544 95148570 -124081 + (CACCC)n Simple_repeat Simple_repeat 3 28 0 2 1310 719 174 34 55 chr17 95148570 95148626 -124025 - B1_Mur2 SINE Alu -92 57 5 2 1310 1988 102 70 80 chr17 95150089 95150515 -122136 - BGLII_Mus LTR ERVK 0 422 1 2 1310 753 279 96 94 chr17 95150605 95151095 -121556 + RLTR12B LTR ERVK 17 507 -21 2 1310 781 65 28 0 chr17 95151092 95151199 -121452 - RLTR22_Mus LTR ERVK -1698 110 1 2 1310 215 322 44 11 chr17 95151199 95151243 -121408 + RSINE1 SINE B4 83 129 -36 2 1310 192 40 0 0 chr17 95151243 95151268 -121383 + (TCTCTG)n Simple_repeat Simple_repeat 6 30 0 2 1310 215 322 44 11 chr17 95151268 95151303 -121348 + RSINE1 SINE B4 130 164 -1 2 1310 211 257 86 0 chr17 95151395 95151465 -121186 - MIR SINE MIR -8 254 179 2 1310 269 211 111 14 chr17 95151651 95151723 -120928 - ID4_ SINE ID -4 79 1 2 1310 510 243 263 0 chr17 95152429 95152581 -120070 + B3 SINE B2 16 207 -9 2 1310 1247 27 7 0 chr17 95152955 95153101 -119550 + B1_Mm SINE Alu 1 147 0 2 1310 237 33 0 0 chr17 95153101 95153131 -119520 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1310 1689 21 0 0 chr17 95153148 95153340 -119311 + B2_Mm1t SINE B2 2 193 0 2 1310 478 234 177 0 chr17 95153473 95153597 -119054 + B1_Mur1 SINE Alu 1 146 -3 2 1310 1457 245 121 3 chr17 95153680 95154053 -118598 - MTD LTR MaLR -2 417 1 2 1310 200 176 0 0 chr17 95154075 95154109 -118542 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 1310 220 195 0 24 chr17 95154124 95154166 -118485 + PB1D7 SINE Alu 19 59 -61 2 1310 259 222 0 0 chr17 95154847 95154892 -117759 - PB1D10 SINE Alu -58 59 15 2 1310 514 202 151 0 chr17 95154995 95155114 -117537 + B1_Mur2 SINE Alu 1 137 -12 2 1310 514 292 0 85 chr17 95155280 95155456 -117195 + RSINE1 SINE B4 5 165 0 2 1310 201 154 0 0 chr17 95155457 95155496 -117155 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1310 587 281 0 0 chr17 95156215 95156343 -116308 - B1_Mur2 SINE Alu -17 132 5 2 1310 619 144 229 0 chr17 95156417 95156535 -116116 + B2_Mm2 SINE B2 2 146 -49 2 1310 257 61 204 0 chr17 95156553 95156602 -116049 + B2_Mm1t SINE B2 130 188 -5 2 1310 1097 114 0 6 chr17 95156685 95156844 -115807 + B2_Mm2 SINE B2 1 158 -37 2 1310 316 285 39 127 chr17 95156833 95156846 -115805 + B4A SINE B4 72 84 -208 2 1310 339 25 0 0 chr17 95156846 95156886 -115765 + (TGAA)n Simple_repeat Simple_repeat 3 42 0 2 1310 316 285 39 127 chr17 95156886 95156913 -115738 + B4A SINE B4 85 174 -118 2 1310 643 202 32 0 chr17 95156913 95157037 -115614 + B1_Mur1 SINE Alu 14 141 -8 2 1310 316 285 39 127 chr17 95157037 95157053 -115598 + B4A SINE B4 175 236 -56 2 1310 375 23 0 0 chr17 95157065 95157109 -115542 + (GGGGA)n Simple_repeat Simple_repeat 2 45 0 2 1310 515 56 14 0 chr17 95157111 95157182 -115469 + (GGAA)n Simple_repeat Simple_repeat 1 72 0 2 1310 192 77 0 0 chr17 95157185 95157211 -115440 + (CATG)n Simple_repeat Simple_repeat 2 27 0 2 1310 477 80 0 0 chr17 95158008 95158083 -114568 + (TG)n Simple_repeat Simple_repeat 1 75 0 2 163 915 88 224 12 chr17 95158229 95158390 -114261 - B2_Mm2 SINE B2 0 195 1 2 1311 376 196 121 20 chr17 95158509 95158608 -114043 - B3 SINE B2 -104 112 4 2 1311 606 248 7 7 chr17 95159274 95159420 -113231 + B1_Mus2 SINE Alu 2 147 0 2 1311 1210 108 26 21 chr17 95159585 95159774 -112877 - B2_Mm1t SINE B2 -2 191 2 2 1311 751 314 39 14 chr17 95159957 95160241 -112410 + B4A SINE B4 2 292 0 2 1311 1097 96 0 0 chr17 95160335 95160481 -112170 - B1_Mm SINE Alu 0 147 2 2 1311 784 261 26 0 chr17 95161372 95161567 -111084 - B3 SINE B2 -15 201 2 2 1311 21 36 0 0 chr17 95161704 95161732 -110919 + AT_rich Low_complexity Low_complexity 1 28 0 2 1311 244 271 0 0 chr17 95162284 95162343 -110308 + tRNA-Ala-GCY_ tRNA tRNA 2 60 -15 2 1311 227 347 0 0 chr17 95162343 95162359 -110292 + ID4_ SINE ID 8 82 -1 2 1311 181 324 65 47 chr17 95162407 95162514 -110137 + MIRm SINE MIR 56 164 -112 2 1311 1096 77 0 0 chr17 95163769 95163912 -108739 - B1_Mm SINE Alu -3 144 2 2 1311 452 176 47 0 chr17 95164165 95164250 -108401 + 5S rRNA rRNA 2 90 -31 2 1311 343 259 12 0 chr17 95164440 95164525 -108126 - B1F SINE Alu -63 86 1 2 1311 361 198 2 0 chr17 95164547 95164619 -108032 - B1_Mus2 SINE Alu -16 133 59 2 1311 339 286 104 9 chr17 95165278 95165380 -107271 + B3A SINE B2 4 115 -83 2 1311 263 250 65 13 chr17 95165380 95165457 -107194 + ID4 SINE ID 1 81 -2 2 1311 562 240 73 39 chr17 95165758 95165936 -106715 + B3A SINE B2 2 185 -13 2 1311 672 110 20 0 chr17 95166409 95166509 -106142 - B1_Mus1 SINE Alu -7 141 40 2 1311 271 218 61 0 chr17 95167212 95167299 -105352 + B1F SINE Alu 23 149 0 2 1311 409 329 66 0 chr17 95167413 95167550 -105101 + ID_B1 SINE B4 79 224 0 2 1311 279 0 0 0 chr17 95167557 95167588 -105063 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1311 464 203 80 0 chr17 95167615 95167767 -104884 + B3 SINE B2 22 209 -7 2 1311 215 125 25 0 chr17 95167839 95167879 -104772 + (CAGA)n Simple_repeat Simple_repeat 1 41 0 2 1311 346 243 378 0 chr17 95167885 95168033 -104618 + B3 SINE B2 1 204 -12 2 1311 593 258 23 15 chr17 95168068 95168198 -104453 + B1F SINE Alu 14 144 -5 3 1311 228 221 123 105 chr17 95168079 95168241 -104410 - YREP_Mm Unknown Unknown -1520 292 128 3 1311 212 297 39 51 chr17 95168526 95168604 -104047 - PB1D7 SINE Alu -1 119 43 3 1311 981 208 23 6 chr17 95168608 95168782 -103869 - B3A SINE B2 -21 177 1 3 1311 680 283 60 81 chr17 95168785 95169032 -103619 - L1_Mur3 LINE L1 -94 5786 5561 3 1311 1099 194 25 0 chr17 95169032 95169233 -103418 - B3 SINE B2 -10 206 1 3 1311 680 283 60 81 chr17 95169233 95169469 -103182 - L1_Mur3 LINE L1 -320 5560 5313 3 1311 307 299 69 0 chr17 95169779 95169923 -102728 - L1M2 LINE L1 -1137 5006 4853 3 1311 1017 165 120 21 chr17 95169943 95170135 -102516 + B3 SINE B2 1 211 -5 3 1311 992 221 5 14 chr17 95170171 95170382 -102269 + B3 SINE B2 2 210 -6 3 1311 329 128 0 0 chr17 95170760 95170807 -101844 - B1_Mur2 SINE Alu -56 93 47 3 1311 251 204 0 0 chr17 95170833 95170887 -101764 - Tigger9b DNA MER2_type -182 442 389 3 1311 382 279 8 0 chr17 95171506 95171606 -101045 + B1F SINE Alu 2 106 -43 3 1311 27 29 0 0 chr17 95171815 95171849 -100802 + AT_rich Low_complexity Low_complexity 1 34 0 3 1311 230 288 152 0 chr17 95171858 95171924 -100727 + PB1D10 SINE Alu 1 76 -41 3 1311 366 318 0 0 chr17 95171932 95172039 -100612 + PB1D10 SINE Alu 10 116 -1 3 1311 340 311 19 19 chr17 95172062 95172167 -100484 + B1F SINE Alu 2 106 -43 3 1311 664 179 16 31 chr17 95172185 95172312 -100339 + B1_Mm SINE Alu 21 145 -2 3 1311 1064 73 0 0 chr17 95172350 95172487 -100164 + B1_Mus1 SINE Alu 1 137 -11 3 1311 686 171 42 87 chr17 95172494 95172686 -99965 + B2_Mm2 SINE B2 1 183 -12 3 1311 410 272 24 73 chr17 95172973 95173037 -99614 - PB1D10 SINE Alu 0 117 59 3 1311 4437 143 74 16 chr17 95173037 95173890 -98761 - RLTR13D6 LTR ERVK 0 902 1 3 1311 410 272 24 73 chr17 95173890 95173948 -98703 - PB1D10 SINE Alu -59 58 1 3 1311 1321 98 0 20 chr17 95173950 95174147 -98504 - B2_Mm2 SINE B2 -2 193 1 3 1311 353 281 133 68 chr17 95174696 95174944 -97707 - RMER15 LTR ERVL -15 560 297 3 1311 348 184 37 62 chr17 95175204 95175285 -97366 + ID SINE ID 4 82 -142 3 1311 1980 222 56 33 chr17 95175343 95175822 -96829 - RMER19C LTR ERVK -34 577 88 3 1311 556 296 114 0 chr17 95176604 95176780 -95871 - ID_B1 SINE B4 -28 196 1 3 1311 525 182 0 66 chr17 95177071 95177177 -95474 - B1_Mur3 SINE Alu -1 148 50 3 1311 239 278 137 14 chr17 95177276 95177349 -95302 + ID4 SINE ID 2 83 0 3 1311 227 167 0 0 chr17 95177363 95177399 -95252 - L1MD LINE L1 -2325 3821 3786 3 1311 297 75 0 0 chr17 95177444 95177484 -95167 + (TTA)n Simple_repeat Simple_repeat 3 42 0 3 1311 513 223 261 0 chr17 95177484 95177641 -95010 - B3 SINE B2 -18 198 1 3 1311 573 86 0 0 chr17 95177726 95177819 -94832 + (GA)n Simple_repeat Simple_repeat 2 94 0 3 1311 272 281 10 82 chr17 95177995 95178011 -94640 + MT2B2 LTR ERVL 152 241 -343 3 1311 402 259 0 0 chr17 95178011 95178092 -94559 + PB1D10 SINE Alu 3 83 -34 3 1311 444 279 0 43 chr17 95178219 95178335 -94316 + RSINE1 SINE B4 1 111 -54 3 1311 225 182 0 0 chr17 95178512 95178567 -94084 + (TGGG)n Simple_repeat Simple_repeat 2 56 0 3 1311 365 197 0 0 chr17 95178801 95178867 -93784 + B3A SINE B2 1 66 -132 3 1311 4658 132 22 0 chr17 95178867 95179646 -93005 - L1_Mm LINE L1 -213 5670 4875 3 1311 488 210 30 68 chr17 95179676 95179809 -92842 + RMER12 LTR ERVK 1090 1217 -105 3 1311 1620 186 108 8 chr17 95180325 95180704 -91947 - MTD LTR MaLR -2 417 1 3 1311 897 233 14 41 chr17 95180816 95181035 -91616 - B3 SINE B2 0 216 4 3 1311 423 0 0 0 chr17 95181322 95181369 -91282 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1311 387 0 0 0 chr17 95181369 95181411 -91240 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 1311 468 0 0 0 chr17 95181864 95181916 -90735 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 1311 242 245 0 0 chr17 95182889 95182942 -89709 - MLT1F2 LTR MaLR -401 159 107 3 1311 315 302 48 56 chr17 95183890 95184109 -88542 - MLT1J1 LTR MaLR -117 327 5 3 1311 26 88 0 0 chr17 95184384 95184452 -88199 + AT_rich Low_complexity Low_complexity 1 68 0 3 1311 604 246 30 7 chr17 95184590 95184725 -87926 + B1_Mur1 SINE Alu 2 139 -10 3 1311 33093 60 4 4 chr17 95185100 95190291 -82360 + L1Md_F3 LINE L1 441 5589 -294 3 1311 8383 32 0 1 chr17 95190299 95191293 -81358 + L1Md_F3 LINE L1 5590 6582 -2 3 1311 300 53 0 0 chr17 95191631 95191669 -80982 + (T)n Simple_repeat Simple_repeat 1 38 0 3 1311 1035 79 0 0 chr17 95191671 95191810 -80841 - B1_Mus1 SINE Alu 0 148 10 3 1311 488 212 51 122 chr17 95191673 95191829 -80822 - B4 SINE B4 -69 223 79 3 1311 604 259 0 0 chr17 95192467 95192610 -80041 + B1_Mur1 SINE Alu 2 144 -5 3 1311 339 260 39 0 chr17 95195778 95195855 -76796 + B4 SINE B4 2 81 -211 3 1311 1663 159 23 29 chr17 95195856 95196166 -76485 + RLTR22_Mur LTR ERVK 1 308 -1540 3 1311 1155 57 0 0 chr17 95196168 95196308 -76343 + B1_Mus2 SINE Alu 2 141 -6 3 1311 4314 134 82 61 chr17 95196333 95197238 -75413 + L1VL1 LINE L1 191 1114 -5308 3 1311 9149 70 25 2 chr17 95197243 95198081 -74570 - Lx3_Mus LINE L1 -114 6895 6051 3 1311 180 0 0 0 chr17 95198081 95198101 -74550 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 3 1311 20861 73 26 37 chr17 95198101 95199313 -73338 - Lx3_Mus LINE L1 -959 6050 4821 3 1311 3240 41 10 2 chr17 95199313 95199706 -72945 + MTA_Mm LTR MaLR 1 396 0 3 1311 20861 75 26 57 chr17 95199706 95200375 -72276 - Lx3_Mus LINE L1 -1066 4820 4126 3 1311 687 123 39 52 chr17 95200375 95200404 -72247 - RMER17B LTR ERVK -495 463 439 3 1311 4068 66 0 2 chr17 95200404 95200908 -71743 + RLTR1C LTR ERV1 1 503 0 3 1311 687 123 39 52 chr17 95200908 95201032 -71619 - RMER17B LTR ERVK -520 438 312 3 1311 20861 75 26 57 chr17 95201032 95202539 -70112 - Lx3_Mus LINE L1 -1761 4125 2593 3 1311 4404 38 0 2 chr17 95203758 95204285 -68366 + L1Md_T LINE L1 6057 6582 0 3 1311 3333 167 33 24 chr17 95205609 95206363 -66288 + L1_Mur3 LINE L1 3444 4204 -1676 3 1311 1902 172 17 44 chr17 95207582 95207995 -64656 - RMER17C LTR ERVK -8 402 1 3 1311 890 190 31 54 chr17 95208092 95208315 -64336 - RMER10A LTR ERVL 0 442 225 3 1311 1020 220 18 67 chr17 95208291 95208574 -64077 + RMER10B LTR ERVL 128 396 -2 3 1311 893 242 58 42 chr17 95208575 95208816 -63835 - RMER10A LTR ERVL -197 245 1 3 1311 189 0 0 0 chr17 95208980 95209001 -63650 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1311 368 290 48 55 chr17 95209379 95209525 -63126 + RLTR23 LTR ERV1 286 430 0 3 1311 32 43 0 0 chr17 95211122 95211168 -61483 + AT_rich Low_complexity Low_complexity 1 46 0 3 1311 324 128 12 25 chr17 95211781 95211861 -60790 + (TTAGGG)n Simple_repeat Simple_repeat 4 82 0 3 1311 1107 105 17 17 chr17 95211861 95212036 -60615 + B2_Mm1t SINE B2 1 175 -18 3 1311 241 138 41 110 chr17 95212679 95212752 -59899 - B2_Mm1a SINE B2 -6 187 120 3 1311 998 158 53 0 chr17 95212717 95212888 -59763 - ORR1A4 LTR MaLR -65 264 85 3 1311 1335 19 0 0 chr17 95212878 95213034 -59617 - B2_Mm1a SINE B2 -36 157 2 3 1311 1718 170 27 63 chr17 95214676 95215009 -57642 - ORR1A4 LTR MaLR -8 321 1 3 1311 5173 142 98 115 chr17 95215009 95215217 -57434 - ORR1A4-int LTR MaLR 0 1963 1776 3 1311 1203 48 14 0 chr17 95215217 95215362 -57289 + B1_Mus2 SINE Alu 1 147 0 3 1311 5173 142 98 115 chr17 95215362 95216319 -56332 - ORR1A4-int LTR MaLR -188 1775 818 3 1311 518 214 117 49 chr17 95216293 95216513 -56138 - MT2B LTR ERVL -342 259 1 3 1311 265 152 182 0 chr17 95216514 95216580 -56071 - MERVL_2A-int LTR ERVL -2 5759 5682 3 1311 240 310 67 35 chr17 95216632 95216916 -55735 - MurSatRep1 Unknown Unknown 0 2137 1845 3 1311 445 286 10 10 chr17 95216724 95217303 -55348 - MMSAT4 Satellite Satellite -6 1224 472 3 1311 354 316 63 35 chr17 95217303 95217588 -55063 - MurSatRep1 Unknown Unknown 0 2137 1845 3 1311 445 286 10 10 chr17 95217588 95217948 -54703 - MMSAT4 Satellite Satellite -6 471 1 3 1311 364 311 29 25 chr17 95217888 95218092 -54559 - MurSatRep1 Unknown Unknown -88 2049 1845 3 1311 397 272 9 9 chr17 95217977 95218283 -54368 - MMSAT4 Satellite Satellite 0 306 1 3 1311 257 339 60 30 chr17 95218059 95218324 -54327 - MurSatRep1 Unknown Unknown 0 2137 1865 3 1311 9284 154 75 54 chr17 95218339 95219104 -53547 - MurSatRep1 Unknown Unknown -36 2101 1345 3 1311 1128 103 103 0 chr17 95219104 95219278 -53373 + B2_Mm2 SINE B2 1 192 -3 3 1311 9284 154 75 54 chr17 95219278 95220415 -52236 - MurSatRep1 Unknown Unknown -793 1344 284 3 1311 472 210 109 0 chr17 95220415 95220534 -52117 + B1_Mur2 SINE Alu 1 132 -17 3 1311 9284 154 75 54 chr17 95220534 95220684 -51967 - MurSatRep1 Unknown Unknown -1854 283 6 3 1311 345 359 10 39 chr17 95220782 95220985 -51666 + B3 SINE B2 2 198 -18 3 1311 246 253 12 62 chr17 95221225 95221305 -51346 + B1_Mus2 SINE Alu 72 147 0 3 1311 1233 41 0 0 chr17 95221307 95221454 -51197 + B1_Mus2 SINE Alu 1 147 0 3 1311 183 139 0 0 chr17 95221490 95221526 -51125 + (TAAAAA)n Simple_repeat Simple_repeat 1 36 0 3 1311 3345 189 27 26 chr17 95221684 95222385 -50266 + Lx4B LINE L1 6353 7054 -4 3 1311 279 282 70 43 chr17 95222469 95222584 -50067 - ORR1E LTR MaLR -241 118 1 3 1311 1503 299 51 120 chr17 95222590 95222784 -49867 - ORR1E-int LTR MaLR -7 1363 1216 3 1311 3182 44 0 0 chr17 95222784 95223172 -49479 - L1Md_F2 LINE L1 -1 6581 6194 3 1311 1503 299 51 120 chr17 95223172 95223838 -48813 - ORR1E-int LTR MaLR -155 1215 562 3 1311 3284 188 42 16 chr17 95223848 95224580 -48071 + Lx4B LINE L1 5637 6387 -671 3 1311 1238 93 0 11 chr17 95224580 95224754 -47897 + B2_Mm2 SINE B2 1 172 -23 3 1311 657 0 0 0 chr17 95224754 95224827 -47824 + (GGAAA)n Simple_repeat Simple_repeat 3 75 0 3 1311 754 184 178 0 chr17 95224828 95225013 -47638 + Lx4B LINE L1 6372 6589 -469 3 1311 1512 247 117 18 chr17 95225027 95225521 -47130 + Lx6 LINE L1 5785 6327 -1133 3 1311 654 299 23 0 chr17 95225566 95225787 -46864 + Lx6 LINE L1 6462 6687 -773 3 1311 965 297 62 15 chr17 95225789 95226127 -46524 + Lx6 LINE L1 7060 7413 -47 3 1311 203 343 43 0 chr17 95226280 95226350 -46301 + MER5A DNA MER1_type 40 112 -77 4 1311 26 64 0 0 chr17 95226559 95226606 -46045 + AT_rich Low_complexity Low_complexity 1 47 0 4 1311 246 161 65 0 chr17 95228534 95228596 -44055 + Lx9 LINE L1 7515 7580 -64 4 1311 762 228 47 0 chr17 95228597 95228790 -43861 - RMER10A LTR ERVL -1 441 240 4 1311 1378 171 4 37 chr17 95228797 95229065 -43586 + RMER10B LTR ERVL 20 278 -120 4 1311 330 26 0 0 chr17 95229077 95229116 -43535 + (CTAAT)n Simple_repeat Simple_repeat 4 42 0 4 1311 228 186 0 0 chr17 95229116 95229159 -43492 + RMER10B LTR ERVL 356 398 0 4 1311 961 240 72 25 chr17 95229179 95229414 -43237 - RMER10A LTR ERVL -196 246 1 4 1311 22 56 0 0 chr17 95229441 95229477 -43174 + AT_rich Low_complexity Low_complexity 1 36 0 4 1311 1535 43 5 0 chr17 95229594 95229780 -42871 - B2_Mm1a SINE B2 -5 188 2 4 1311 1188 110 55 0 chr17 95231486 95231668 -40983 + B2_Mm2 SINE B2 4 195 0 4 1311 1121 50 21 0 chr17 95231835 95231976 -40675 + B1_Mus1 SINE Alu 3 146 -2 4 1311 252 0 0 0 chr17 95232341 95232369 -40282 + (TC)n Simple_repeat Simple_repeat 1 28 0 4 1311 1034 278 124 45 chr17 95232371 95232838 -39813 - Lx2 LINE L1 0 6997 6494 4 1311 478 293 5 70 chr17 95234750 95234937 -37714 - MT2B LTR ERVL -38 563 389 4 1311 954 45 23 0 chr17 95235260 95235393 -37258 - L1Md_F2 LINE L1 -2 6580 6445 4 1311 1194 115 22 0 chr17 95235468 95235651 -37000 - B2_Mm2 SINE B2 -7 188 2 4 1311 204 40 0 0 chr17 95235984 95236009 -36642 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 4 1311 1302 92 11 0 chr17 95236572 95236746 -35905 + B2_Mm1t SINE B2 2 177 -16 4 1311 1062 30 52 7 chr17 95236747 95236883 -35768 + B1_Mus1 SINE Alu 2 143 -5 4 1311 1094 123 0 11 chr17 95236896 95237077 -35574 + (GGA)n Simple_repeat Simple_repeat 2 180 0 4 1311 356 87 316 9 chr17 95237148 95237262 -35389 + B2_Mm2 SINE B2 47 195 0 4 1311 297 230 23 11 chr17 95237418 95237506 -35145 + RLTR42-int LTR ERVK 2872 2960 -2562 4 1311 2623 169 23 2 chr17 95238446 95238972 -33679 + L1_Mm LINE L1 4769 5305 -578 4 1311 2323 82 2 62 chr17 95238984 95239385 -33266 - L1_Mur1 LINE L1 -409 5477 5101 4 1311 30140 71 4 7 chr17 95239398 95241133 -31518 - L1_Mus1 LINE L1 -3 6564 4843 4 1311 3706 11 123 0 chr17 95241133 95241572 -31079 + MT2_Mm LTR ERVL 1 493 0 4 1311 30140 113 14 16 chr17 95241572 95246056 -26595 - L1_Mus1 LINE L1 -1041 4842 356 4 1311 780 11 0 0 chr17 95246071 95246160 -26491 + (TTC)n Simple_repeat Simple_repeat 2 90 0 4 1311 1202 49 0 0 chr17 95246180 95246322 -26329 - B1_Mus2 SINE Alu -4 143 2 4 1311 743 40 20 0 chr17 95246322 95246421 -26230 - L1_Mur1 LINE L1 -771 5115 5015 4 1311 3050 77 22 18 chr17 95246424 95246940 -25711 + Lx3_Mus LINE L1 5456 5970 -1039 4 1311 416 91 0 91 chr17 95246940 95247061 -25590 + (TTAGGG)n Simple_repeat Simple_repeat 1 110 0 4 1311 318 304 10 80 chr17 95247143 95247243 -25408 + B4 SINE B4 200 292 0 4 1311 1020 268 45 6 chr17 95247288 95247622 -25029 + L1MB3 LINE L1 5837 6183 0 4 1311 858 59 17 0 chr17 95248635 95248753 -23898 - B2_Mm1t SINE B2 -73 120 1 4 1311 1531 241 45 34 chr17 95248763 95249115 -23536 - MTD LTR MaLR -14 405 50 4 1311 408 326 7 57 chr17 95249272 95249552 -23099 + RLTR6-int LTR ERV1 7456 7721 -57 4 1311 1926 126 144 2 chr17 95249641 95250006 -22645 + RLTR47_MM LTR ERV1 1 380 -66 4 1311 387 184 72 19 chr17 95250195 95250307 -22344 + LTR48 LTR ERV1 701 785 -2 4 1311 1419 288 102 65 chr17 95250309 95250506 -22145 + Cheshire DNA MER1_type 1400 1573 -847 4 1311 1314 85 0 6 chr17 95250506 95250683 -21968 - B2_Mm2 SINE B2 -18 177 2 4 1311 1419 288 102 65 chr17 95250683 95251149 -21502 + Cheshire DNA MER1_type 1574 2088 -332 4 1311 1110 89 0 14 chr17 95251232 95251380 -21271 + B1_Mus2 SINE Alu 1 146 -1 4 1311 700 200 8 0 chr17 95251385 95251510 -21141 + B1_Mur4 SINE Alu 24 149 -1 4 1311 739 237 23 0 chr17 95251534 95251665 -20986 + RSINE1 SINE B4 1 134 -31 4 1311 228 35 0 0 chr17 95251676 95251705 -20946 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1311 378 0 0 0 chr17 95251705 95251746 -20905 + (GA)n Simple_repeat Simple_repeat 2 43 0 4 1311 25 0 0 0 chr17 95252243 95252268 -20383 + AT_rich Low_complexity Low_complexity 1 25 0 4 1311 418 275 0 0 chr17 95252278 95252369 -20282 + B3A SINE B2 1 91 -107 4 1311 568 309 80 102 chr17 95252532 95253134 -19517 + Kanga2_a DNA Tc2 158 762 -126 4 1311 508 246 135 90 chr17 95253134 95253290 -19361 - RSINE1 SINE B4 0 165 3 4 1311 568 309 80 102 chr17 95253290 95253353 -19298 + Kanga2_a DNA Tc2 763 808 -80 4 1311 354 325 97 85 chr17 95253363 95253622 -19029 - MLT1A0 LTR MaLR -4 361 100 4 1311 1151 118 31 21 chr17 95253668 95253859 -18792 + B2_Mm2 SINE B2 2 194 -1 4 1311 1082 98 9 129 chr17 95254258 95254468 -18183 + B2_Mm1t SINE B2 1 185 -8 4 1311 672 293 56 0 chr17 95254636 95254849 -17802 - MER2 DNA MER2_type 0 345 121 4 1311 329 104 0 0 chr17 95254849 95254897 -17754 + B3 SINE B2 1 48 -168 4 1311 746 118 58 29 chr17 95255282 95255421 -17230 + B2_Mm2 SINE B2 44 186 -9 4 1311 246 310 17 26 chr17 95255486 95255543 -17108 + polypyrimidine Low_complexity Low_complexity 60 115 0 4 1311 2708 40 3 0 chr17 95255543 95255872 -16779 - L1Md_A LINE L1 -1 6581 6252 4 1311 246 310 17 26 chr17 95255872 95255930 -16721 + polypyrimidine Low_complexity Low_complexity 1 59 0 4 1311 399 320 19 0 chr17 95255949 95256052 -16599 - PB1D10 SINE Alu -10 107 3 4 1311 227 275 19 117 chr17 95255971 95256074 -16577 - MT2B LTR ERVL -359 242 150 4 1311 191 278 82 14 chr17 95256705 95256778 -15873 - L3 LINE CR1 -931 3558 3481 4 1311 479 83 246 9 chr17 95256793 95256903 -15748 + B2_Mm2 SINE B2 51 186 -9 4 1311 217 119 0 45 chr17 95258075 95258119 -14532 + T-rich Low_complexity Low_complexity 1 42 0 4 1311 23 0 0 0 chr17 95258125 95258148 -14503 + AT_rich Low_complexity Low_complexity 1 23 0 4 1311 1999 153 67 9 chr17 95259139 95259482 -13169 + ORR1B2 LTR MaLR 1 363 -4 4 1311 484 284 0 0 chr17 95259597 95259706 -12945 - PB1D10 SINE Alu -6 111 3 4 1311 451 355 110 22 chr17 95259804 95260159 -12492 + Tigger15a DNA TcMar 208 593 -122 4 1311 184 286 71 0 chr17 95260160 95260216 -12435 - MIRb SINE MIR -14 254 195 4 1311 346 300 68 15 chr17 95260216 95260348 -12303 + Tigger15a DNA TcMar 575 713 -2 4 1311 262 312 42 0 chr17 95260480 95260576 -12075 - Tigger7 DNA MER2_type -71 2420 2321 4 1311 1427 63 10 16 chr17 95261642 95261835 -10816 - B2_Mm2 SINE B2 -2 193 2 4 1311 371 78 16 0 chr17 95263310 95263374 -9277 + (TTTTA)n Simple_repeat Simple_repeat 1 65 0 4 1311 309 24 0 0 chr17 95263374 95263415 -9236 - B1_Mm SINE Alu -1 146 106 4 1311 327 25 0 0 chr17 95264507 95264547 -8104 + (T)n Simple_repeat Simple_repeat 1 40 0 4 1311 1272 27 0 0 chr17 95264547 95264694 -7957 - B1_Mus2 SINE Alu 0 147 1 4 1311 2503 122 32 12 chr17 95265865 95266265 -6386 - RLTR9E LTR ERVK -1 408 1 4 1311 299 139 73 8 chr17 95266302 95266372 -6279 - B2_Mm2 SINE B2 -98 118 47 4 1311 1325 69 11 11 chr17 95266386 95266563 -6088 - B2_Mm1t SINE B2 -15 178 2 4 1311 1454 230 22 62 chr17 95266579 95266982 -5669 - Lx6 LINE L1 -15 7445 7059 4 1311 3509 260 37 40 chr17 95266950 95267123 -5528 - Lx6 LINE L1 -749 6711 6546 4 1311 234 0 0 0 chr17 95267123 95267149 -5502 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 1311 3509 225 30 57 chr17 95267149 95268501 -4150 - Lx6 LINE L1 -915 6545 5196 4 1311 1040 59 81 0 chr17 95268501 95268637 -4014 + B1_Mm SINE Alu 1 147 0 4 1311 2956 193 24 72 chr17 95268637 95268700 -3951 - Lx6 LINE L1 -685 5195 5137 4 1311 327 85 0 0 chr17 95268769 95268816 -3835 + (T)n Simple_repeat Simple_repeat 1 47 0 4 1311 1079 89 14 0 chr17 95268816 95268962 -3689 - B1_Mus1 SINE Alu 0 148 1 4 1311 1525 52 0 15 chr17 95268970 95269165 -3486 - B2_Mm1a SINE B2 0 193 2 4 1311 651 61 0 0 chr17 95269244 95269326 -3325 - U5 snRNA snRNA -32 84 3 4 1311 852 309 63 55 chr17 95269751 95270117 -2534 + MTD LTR MaLR 35 403 -16 4 1311 2548 275 121 69 chr17 95270156 95271308 -1343 + MTD-int LTR MaLR 24 1245 -125 4 1311 1222 92 43 21 chr17 95271308 95271496 -1155 + B2_Mm2 SINE B2 1 192 -3 4 1311 2548 275 121 69 chr17 95271496 95271596 -1055 + MTD-int LTR MaLR 1246 1341 -29 4 1311 422 267 83 47 chr17 95271674 95271843 -808 - RLTR23 LTR ERV1 -13 417 243 4 1311 605 200 50 7 chr17 95271860 95272001 -650 - B1_Mus2 SINE Alu 0 147 1 4 1311 1415 75 16 5 chr17 95272184 95272373 -278 + B2_Mm2 SINE B2 1 191 -4 4 1311 751 286 55 15 chr17 95272435 95272634 -17 - B3 SINE B2 0 216 10 4